LOCUS       DATAVD010000001         1685 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_558416, whole genome shotgun sequence.
ACCESSION   DATAVD010000001 DATAVD010000000
VERSION     DATAVD010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1685
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_558416"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..947)
                     /locus_tag="VHX39_00005"
     CDS             complement(<1..947)
                     /locus_tag="VHX39_00005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase family
                     protein"
                     /protein_id="HEX3989528.1"
                     /translation="MIEQRTFFDDMRSTLGDAIEQTRASLLTYAQTHRHWAVAYSGGK
                     DSSAAVTIVARLIETGRVPTPESLTVLYADTRMEITPLQVAALRVMAELRERGIRTKV
                     VLPDLDDRFMVYMLGRGVPPPKNRVRWCTSQIKIEPRMRALQSLRDEVGEKILMITGV
                     RLGESAARDARIVISCSRDGAECGQGWFQEATPEAVADTLAPILHWRVCHVWAWLTAH
                     CPDLGFPTLDIAIAYGGKEAEEVNARTGCMGCPLASKDNALLAVVQQPQWSYLSPLLR
                     LKPLYSELSFNHSNRLRKTDIELRKDGSAASNPQRVGPLT"
     gene            989..1231
                     /locus_tag="VHX39_00010"
     CDS             989..1231
                     /locus_tag="VHX39_00010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989529.1"
                     /translation="MNFMYRDGWSVHCLAEDAKTVVGRPLTMTEDSTLLRLFRFIGAT
                     EDDIREIERDIGRRGRGSVWLEVTERGMKMFGLFMP"
     gene            complement(1221..>1685)
                     /locus_tag="VHX39_00015"
     CDS             complement(1221..>1685)
                     /locus_tag="VHX39_00015"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEX3989530.1"
                     /translation="LSKSERYYYDAGSIKEPNTELSLKRHGGPREQPCDDARAKDGPG
                     WKAHRGTLNVNGGFTDGRNKRSVWTVATQAFPEAHFATFPEELITPCVLAGCPIGGTV
                     LDPFSGSGTTGVVALRYHREYIGIELSAEYAAMSERRIRGDAPLFNDGEVTA"
BASE COUNT          336 a          506 c          482 g          361 t
ORIGIN      
        1 gtcagcgggc cgacgcgctg tgggttactg gcagcgctgc catccttccg gagttcgata
       61 tcggtctttc ggagccggtt cgagtggttg aaacttagtt cgctataaag cggcttcaag
      121 cggagcagcg gcgacaggta agaccattgc ggctgttgca caacggcaag cagcgcgttg
      181 tctttgctcg ccaatgggca ccccatacac cccgtgcgtg catttacttc ctcggcctct
      241 ttaccgccat atgctatggc aatgtcgagc gtcgggaagc cgagatcggg gcagtgcgct
      301 gtgagccatg cccacacatg gcatacccgc cagtggagga ttggggccaa ggtatccgct
      361 acggcttccg gagtggcctc ctggaaccaa ccctgcccgc attccgcacc gtcacggctg
      421 caactgatca cgatccgagc atcacgggcc gcactctcgc cgagacgaac tccggtaatc
      481 atcaagatct tctctccgac ctcgtcgcga agcgactgga gagctctcat ccttggttcg
      541 attttgattt gagaggtgca ccaccggaca cggttctttg ggggtgggac tccgcgacca
      601 agcatgtaca ccatgaagcg gtcgtcaaga tccggtagaa ctaccttcgt ccgaatgcca
      661 cgttcccgca gttccgccat caccctcagg gccgcaacct gaagtggcgt aatttccatc
      721 cgcgtatcgg cgtagagaac cgtcagcgac tctggcgtcg gtacccgacc cgtctcgatc
      781 aagcgtgcga cgatggtcac cgcggcggaa gaatcctttc cgccgctata cgcgaccgcc
      841 cagtggcggt gcgtctgggc ataggtaagc aatgatgcgc gcgtttgctc gatggcgtcc
      901 cccagcgtag atcgcatatc gtcaaagaag gtccgctgct caatcatttc tcaccgccct
      961 gctgtagact tccccggtga gaattctggt gaacttcatg taccgggacg gctggagcgt
     1021 ccattgcctg gcagaggacg caaaaacggt cgtggggcgt ccactcacca tgaccgagga
     1081 ttcaactctt ttacggctgt tccgtttcat cggtgccacg gaagatgaca ttagagagat
     1141 cgagcgagac atcggccgcc ggggccgggg cagtgtatgg ctcgaagtca ccgaacgggg
     1201 catgaagatg tttggactat tcatgccgtg acctcgccat cattgaataa cggggcatca
     1261 ccgcggattc gacgctcgct catagcagcg tattcggccg acaactcaat cccgatatac
     1321 tcgcggtgat agcggagggc aaccacgccg gttgtccctg atccgctgaa tgggtctaaa
     1381 actgtcccgc ctatcgggca gccggccaga acgcaaggcg ttatcaattc ttcagggaaa
     1441 gtggcgaagt gtgcttccgg aaatgcctgc gtcgcaaccg tccaaactga gcgcttgttt
     1501 cggccatcag taaatccgcc attaacgttg agcgttccac gatgcgcttt ccagccagga
     1561 ccatctttgg cgcgagcgtc atcgcatggc tgttctcgcg gaccgccgtg tcgcttcagc
     1621 gaaagctccg tgttgggctc tttgatcgag cccgcatcgt agtaataccg ctcgctcttg
     1681 ctcag
//
LOCUS       DATAVD010000002         2830 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_558588, whole genome shotgun sequence.
ACCESSION   DATAVD010000002 DATAVD010000000
VERSION     DATAVD010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2830
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_558588"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..396)
                     /locus_tag="VHX39_00020"
     CDS             complement(<1..396)
                     /locus_tag="VHX39_00020"
                     /inference="COORDINATES: protein motif:HMM:NF044870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HEX3989531.1"
                     /translation="MRQEPTLNFMHQSIIALRSLRIGIFIAVLAICAAWSPASHEARA
                     AGLAFVVNSGSASISVIDMSARKELRRIPALREPHHVILSLDGKSLLVGDTTGNQMLF
                     LDPQTGEVQRRVTVADPYQLGLSPDGKFLV"
     gene            complement(586..1941)
                     /locus_tag="VHX39_00025"
     CDS             complement(586..1941)
                     /locus_tag="VHX39_00025"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEX3989532.1"
                     /translation="MTSWHSTRGTPALIVVSGFAAAMAATTWLAPSLLPGLVGALLAA
                     GSIVLACRHLTAAWVGWLLVAGLSLENAVADVIGPDAFEATIAAVKATEIGLVVLTIL
                     GTGLVLDQFNPAWAFGAMAATGLVAGTHPDLTMLAALRSLTGDITPFLLFFCVKPIGW
                     GAAMRRAVTLAPALSVILGTLLDLAGLRPVFLESGGLRLAGLGHPAFLAGVCLPALYA
                     GLIRWLRTAAPAEAGLIGINLVILFLTGARAPAAYAAVVIGGSLLIVPGSAVPRAHRL
                     VLIAAGLTTLPVLLVLGQSAGSLRLFEVLNTNADSLSGRQLLWPLFEAAAAKAPWFGW
                     GLGSGNLVIPRTSLIVELLHTWAAHNEYLRIQVEGGYVGRTLLIALFVLWAVSHTRRL
                     PALEKVVMRLVFITFAAHAMTDNVLISTPACVFFAFIAAIYAEADDVASNCLRTTPDV
                     A"
     gene            2138..2320
                     /locus_tag="VHX39_00030"
     CDS             2138..2320
                     /locus_tag="VHX39_00030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989533.1"
                     /translation="MVNLVVADTGIWLVAEAFGLLCVNVSDIFRCAQLGSNEFAELIG
                     ALLVLFRMSVIPETRP"
     gene            2337..2807
                     /locus_tag="VHX39_00035"
     CDS             2337..2807
                     /locus_tag="VHX39_00035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989534.1"
                     /translation="MKFTYTAGCMALLAIAQAYAQNVIVLPNTGEQSSSITVTRNVPV
                     AVGQTFSMHFQLSQTLQGNASSTDLSNMMANASQTLYDLANRECELLTVAFKGTCRVT
                     QVNVGANINGPMNGRGPVVNSNANATYEIDPAPAAAPTPSAAAPTPSAPAAPPH"
BASE COUNT          582 a          833 c          901 g          514 t
ORIGIN      
        1 caccagaaac ttgccatccg ggctgagacc aagctgatac gggtcggcga ccgtcacgcg
       61 ccgctgcacc tcaccggtct gcggatcgag gaacagcatc tggtttccgg tggtatcgcc
      121 gaccagcagg cttttgccgt ccaggctgag gatcacgtgg tgcggctcac gcaacgccgg
      181 gatccgccgc aattccttgc gcgccgacat atcgatcacg ctgatcgatg cactgcccga
      241 attcaccacg aacgcgaggc cggcagcgcg tgcttcatgg ctggcaggcg accaggcggc
      301 gcagatcgcc agcacggcaa tgaaaatgcc gatccgcaat gacctcaatg cgatgatcga
      361 ttgatgcata aaattcagcg tcggttcctg tcgcatgggc ggcagcgtaa tcgtggcgtc
      421 gtctcggccc ggtttctgct gcgtgatggc gtggtcgagg cctctccggg accgcagtgc
      481 gacaatcccc ggtcgatccg ttgtagcggc cgggggagga ggatggcttc gggtacgaga
      541 acgcggaatc gcaggtcagt ccctccggcg tagccgaagc gttccctacg ccacgtccgg
      601 cgtggttcgc aagcaattgc tcgcgacgtc atctgcctcg gcgtaaatcg cggcaatgaa
      661 ggcgaaaaac acgcaggctg gcgtggaaat cagcacattg tcggtcatcg cgtgggcggc
      721 aaaggtgatg aacacaagtc gcatcaccac cttctccaac gccggcagcc gcctggtgtg
      781 ggagaccgcc caaagcacga acagcgcgat caacagggtg cggccgacat acccgccctc
      841 cacctggatg cgcagatatt cgttatgcgc ggcccaggtg tggaggagtt cgacgatgag
      901 acttgtgcga gggatgacga ggttgccgga acccaggccc caaccgaacc agggggcttt
      961 cgctgcggct gcctcgaaca gcggccaaag caactggcgg ccgctcaagc tgtcggcgtt
     1021 ggtgttcagc acctcgaaca ggcggaggga cccggcgctc tggcccagta ccagaagcac
     1081 ggggagggtg gtgagaccgg ctgcgatcaa taccaaccgg tgggcgcgcg ggacggctga
     1141 tccgggcacg atcaacagac tgccgccgat gacgacggcg gcataggcgg caggcgctcg
     1201 ggcaccggtc aggaacagga tgaccagatt gatgccgatc aagccggctt cggccggagc
     1261 ggcggtccgt agccaacgga tcaatccggc gtagagggct ggcagacaga cgcccgccag
     1321 gaacgccgga tggccaagcc cggcaaggcg taggccgcca ctttccaaaa acaccggacg
     1381 taagccggcg aggtcgagca gcgtgcccaa aatcacggac aatgccggcg cgagcgtgac
     1441 ggcccgacgc atcgcggcgc cccagccgat cggtttgacg cagaagaaca gcagaaacgg
     1501 cgtgatatcg ccggtcagtg agcgcagcgc cgccagcatc gtcaggtcgg gatgggttcc
     1561 tgccacgagc cccgtagcgg ccatggcccc gaaagcccag gccgggttga actgatccag
     1621 caccaggccg gtgccgagaa tggtcagcac gacgaggccg atctcggtcg ccttgaccgc
     1681 cgcaatggtt gcctcgaacg cgtcgggccc gatgacatcg gccaccgcgt tctccagcga
     1741 cagaccggcg accaacagcc agccaaccca ggcggcggtc aggtggcggc aggccagcac
     1801 aatggaaccc gccgcgagaa gtgcgccaac gaggcccggg agcagcgacg gcgcaagcca
     1861 ggtggtggct gccatggccg cagcaaaccc ggacaccacg atcagcgccg gggtaccccg
     1921 ggtactgtgc caactcgtca tggcgggagt ttgggtgccg atgctgaaga aaacgtttac
     1981 ttcgggccgg ttcgttcaat ttgtggtttg ccatgatcga tgccactgca aaggttggcg
     2041 ccggagcaga gaccggtgtt gcgttccctc ggcatggtct gcggaacgtc cggttcgcct
     2101 gccgatatat gggatgctgt gtcgtggatg tattgaaatg gttaacctgg tcgttgccga
     2161 taccggtatc tggttggtag cagaagcttt tggtttgctt tgtgtgaacg tcagtgatat
     2221 ttttcgttgc gctcagcttg gttcaaacga atttgcggaa ttgattggtg cattgctggt
     2281 gctttttcga atgtcggtga tacctgaaac ccgcccgtaa ctattgagag acccagatga
     2341 aatttaccta tactgctggt tgcatggcgc tgcttgcgat tgcccaggct tatgcacaga
     2401 atgtcattgt tttgccaaat acgggtgagc agagtagttc cataacggtg accaggaatg
     2461 tccccgttgc ggttggccag actttttcaa tgcattttca gctttcccag acgttgcaag
     2521 ggaacgcttc ctcgacagat ttatcaaaca tgatggcgaa tgccagtcag acattatatg
     2581 atctggcaaa tcgtgaatgc gaattgctga ctgtggcttt taaggggacc tgccgtgtca
     2641 cccaggtcaa cgtcggcgcc aacataaacg ggccgatgaa cggtagaggc ccggtggtaa
     2701 attcgaatgc caacgcgacg tatgagattg atcctgcgcc tgccgccgcg ccaacaccat
     2761 ctgccgccgc tccgacaccg tctgcgcctg ccgcgccgcc gcattagctc gagcagcgct
     2821 gcatttccgg
//
LOCUS       DATAVD010000003         3279 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3536559, whole genome shotgun sequence.
ACCESSION   DATAVD010000003 DATAVD010000000
VERSION     DATAVD010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3279
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3536559"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1011)
                     /locus_tag="VHX39_00040"
     CDS             complement(<1..1011)
                     /locus_tag="VHX39_00040"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3989535.1"
                     /translation="MTGITHANFVFHDFRTTGGEILPEVTLAYVARGTLAPDGRNAIL
                     ITHGYTSGPRMIEPGEGSSEGSWTTLVGPGAPIDTDRYFVICSNMLGSSYGSTNAASI
                     DPRTARPYGSKFPRITVEDIVTAQKRMLDGLGVKHLRAVVGPSYGGFQAFQWGVTFPD
                     FMDGIVAVVTSPKTAGTDRVGGLLKWFEPDPNWNGGDYYATGGVRKTLAALRVDTLTR
                     YGMAASLAARLPTKAAAAAELHRIADTWAAGFDANSLFILGRAIETFDVTSRFELIKV
                     PLLYVLSRTDALFPPSIAPGIMDGLKAAGVDATYFEIDSDEGHLASGVDAAKWAPVLQ
                     TFM"
     gene            complement(1102..>3279)
                     /locus_tag="VHX39_00045"
     CDS             complement(1102..>3279)
                     /locus_tag="VHX39_00045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989536.1"
                     /translation="RSEAEAAVAECDAALAAALARVPTWSGGAEALVALAPPVTEVWR
                     RLDADMTAKRNEVANAAERLDDEIAKLEQARNALTGGGTIADDAALAHARSHRDVGWR
                     LIYRRAFTADPPSAAEEREFASGVPLPLAFERAIGEADAVADRRAASSEILGLLAAAR
                     RNVDDATQRVAAARERLRLAGEAHTQTRRLWSGLCHAIEQDADAALADVLAFLNARDQ
                     AIDVLQRRALALHMLQTLCRRQRDWAVALAAALNQEPADLAKLLGRADQTLAQAREQQ
                     KRRQQLEALQAQATKELRDATVARHAAEAGITEWQRRWQAVLADLGRPADEEPAETEA
                     VLQILADIEKEQVTASSLLERINGMKARVDRFTGTVHALCQKLPGLTAARDPMDAVRE
                     LHRQLDEERVRDLRRHMLQEGRTKAREADAAATRDLIEAQAKLHAVLTVIGADTVETA
                     EQRLALSDERDGFEAKHVEAEAELRQAGDGHSIETLAAETATIPVDEDTARIEAASLA
                     HRQANEAAQQAAEDASRLRHNMEQIARKTEVNVAAADQQAAIASLSRTLDEALLYHTA
                     AALLSRALDAVEQSGGSVMLRRLSGIFQTMTNGIYSNVTSDRDDSGNDQLVMIQRDFP
                     EERQRIDQLSEGTRDQLFLALRVAAIEDHLKTAEPLPFIGDDILQTFDDDRALAALRV
                     LTELSQHTQVIVLTHHRHILELATRLPPDSVFECTRETPAAIA"
BASE COUNT          587 a         1095 c          958 g          639 t
ORIGIN      
        1 catgaatgtc tgcaacaccg gtgcccattt ggcagcgtcg acacccgatg caagatgacc
       61 ctcatcgctg tcaatctcga aatacgtggc gtcgactccg gcagctttca gtccatccat
      121 gatgccaggc gcaatcgatg gcggaaacag cgcatcggtg cgcgacagca catacagcaa
      181 cggaactttt atcaattcga accggctggt cacgtcgaac gtctcaatcg ctcgcccgag
      241 aatgaacagc gagttcgcat cgaaccctgc agcccacgta tcggcgatgc gatggagttc
      301 ggcggcggcg gcggccttgg tgggaaggcg ggcggcgagc gaggccgcca tcccgtaacg
      361 cgtcagcgta tcgacccgca acgcagccag cgtcttccgc acgccgccgg ttgcgtaata
      421 gtcgccgcca ttccagttcg gatcgggctc aaaccatttc aacaggccac cgacccgatc
      481 ggtgcccgcc gttttcggcg aggtcaccac ggccactatg ccgtccatga aatcggggaa
      541 cgtcacgccc cattggaacg cctggaagcc accgtatgat ggcccgacca cggcacgcag
      601 atgtttcacg ccaagcccgt ccaacatccg cttctgcgca gtgacgatat cttccaccgt
      661 gatccgcgga aacttcgacc cgtacggcct ggcagtgcgg ggatcgatcg acgccgcatt
      721 ggtcgaacca taactggaac ccagcatgtt ggagcaaatg acaaaatatc gatccgtatc
      781 gatcggtgcg cccggaccaa ccaaagtggt ccaggaacct tccgaagacc cctcgcccgg
      841 ttcgatcatg cgcggcccgc tggtatagcc atgcgtaatc aggatcgcgt tgcgcccatc
      901 cggcgccagg gtcccgcgcg cgacataggc cagcgtcacc tccggcagga tctcgccgcc
      961 ggtggtgcgg aagtcgtgaa agacaaaatt cgcgtgcgtg atgccggtca ttctggtgcc
     1021 ctctcatttg cccggggaat ttgccacccg gacgccaatc atgcgagtca tcccgaacgc
     1081 cggatcctcg aatgcgctaa ctcaggcaat agcggcgggc gtctcgcgcg tgcattcgaa
     1141 taccgaatcc ggcggcagtc gtgtggcgag ttccagaata tgccgatgat gcgttagcac
     1201 aatgacctgg gtgtgctggc tgagttccgt cagcacgcgt agagccgcca gcgcccggtc
     1261 atcgtcgaag gtctgcagaa tatcatcccc gatgaacggt aacggttcgg ctgtcttcag
     1321 gtgatcctcg attgccgcca cacgcagcgc cagaaataac tgatcgcgag tgccttcaga
     1381 caattgatcg atccgttgcc gttcttccgg aaaatcgcgt tggatcatga ccagttggtc
     1441 gttcccgctg tcgtcccggt cactggtcac attgctgtaa atcccattgg tcatggtctg
     1501 gaagataccc gacagccgtc gcagcatcac tgaaccaccg gactgttcga cggcgtcgag
     1561 cgcgcgtgac aacaatgcgg ctgcggtatg atacagcaac gcctcatcca gcgtacgtga
     1621 cagcgacgcg atcgcggcct gctgatccgc agcagcaacg ttgacctcgg tcttccgggc
     1681 aatctgctcc atgttgtgcc gcagccggct ggcatcttct gcggcctgct gcgctgcctc
     1741 atttgcctgc cggtgtgcga ggctggcagc ctcgatccgc gcggtatcct catccaccgg
     1801 gatcgttgcg gtttccgccg ccagcgtttc gatcgaatgt ccgtcgccgg cctgccgcag
     1861 ttccgcctcc gcctccacat gtttcgcttc gaacccgtca cgttcgtcgg acagcgcaag
     1921 ccgttgttcg gctgtttcca ccgtgtccgc gccgatgacc gtcaggaccg cgtgcaattt
     1981 cgcctgcgcc tcaatcaggt cccgcgttgc ggcggcgtca gcttcgcgcg ccttggtgcg
     2041 gccttcctgc agcatatgcc ggcgcagatc gcgcacccgt tcttcatcca actgccgatg
     2101 cagttcgcgc accgcatcca tcgggtcgcg ggcagcagtc aggcccggca gtttctggca
     2161 aagcgcatgc actgtgccgg tgaagcgatc gacgcgcgct ttcatgccgt taatccgctc
     2221 cagcaacgag ctggcggtga cctgttcctt ttcgatatcg gcgaggatct gtaacacggc
     2281 ctcggtttct gccggttcct cgtcagccgg ccggccgagg tctgccagca cggcctgcca
     2341 acgtcgttgc cattcagtga tgccggcttc ggctgcgtgc ctcgccaccg ttgcatcccg
     2401 caattccttg gtcgcctggg cctgtagcgc ctccagttgt tggcggcgct tctgctgctc
     2461 acgggcctgc gcgagagtct ggtcggcacg gcctaacaat ttcgccagat cggcgggttc
     2521 ctggttgagc gcagcggcaa gggcaaccgc ccaatcccgc tgtcgccggc acaatgtctg
     2581 caacatatgc aaggcgagcg cacgccgctg cagcacatcg atcgcctgat cgcgcgcgtt
     2641 caaaaatgcc agaacgtcgg ccagcgcggc atcggcatcc tgttcgatcg catggcaaag
     2701 ccccgaccaa agccgccttg tctgggtgtg agcctcgccg gcaaggcgca atctctcacg
     2761 tgccgctgca acacgttgcg ttgcgtcatc aacgttgcgc cgtgccgcgg caagcaggcc
     2821 aagtatttcg gaactcgcgg cacgccggtc ggcaacggcg tcggcctctc cgatcgctcg
     2881 ttcaaaggcc aggggcagcg gtacacccga tgcgaattcc cgttcctccg cagccgacgg
     2941 cgggtccgcg gtgaacgcgc gtcgatagat caaccgccat ccgacatcgc gatgcgaccg
     3001 cgcatgcgcc agggccgcat cgtcggcgat cgttccgcct ccggtcagcg cgttgcgcgc
     3061 ttgttcgagt ttggcaattt cgtcgtcaag ccgttcggcg gcgttcgcaa cttcgttgcg
     3121 tttggctgtc atatcggcat cgagacggcg ccagacctcc gtgacaggtg gagcaagagc
     3181 gaccagcgcc tccgctcccc ctgaccatgt tggaacccgc gccagcgcag cggccaaagc
     3241 agcgtcacac tccgctaccg ctgcctcggc ctccgatcg
//
LOCUS       DATAVD010000004         9122 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1303140, whole genome shotgun sequence.
ACCESSION   DATAVD010000004 DATAVD010000000
VERSION     DATAVD010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9122
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1303140"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..565
                     /locus_tag="VHX39_00050"
     CDS             <1..565
                     /locus_tag="VHX39_00050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEX3989537.1"
                     /translation="EPDVASDSSAETYIAAKFMIDNWRWAGVPFYVRTGKYMKSRKTE
                     IAIRFHQAPYSLFRGTDVDRMHPNWLILRVQPDEGIELAFAAKRPGPTVQLSTVSMDF
                     AYKTFFKMAPNTGYETLLYDCMIGDATLFQRADNIEAGWRAVQPILDLWSATKPTDFP
                     NYAAGSTGPAAADALLARDGHAWRPLD"
     gene            587..1405
                     /locus_tag="VHX39_00055"
     CDS             587..1405
                     /locus_tag="VHX39_00055"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010518192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEX3989538.1"
                     /translation="MPKKQKISLVLADVDGTLVTEDKVLTKRAQAAVQRLRDAGIHFA
                     ITSGRPPKGMEMLFDELRLETPIAGFNGGLFVKTDLSIIEQKTLPEDVATKAIELIHA
                     HGLDAWVYRGNDWLITKQNAPHVDREAWTVRFPPRVVSDFAGMLGDVAKIVGISDDLD
                     KVQRCEADAQAAFGQRATATRSQPYYLDVTNKDANKGAVADYLSRHLDVPPEEIATLG
                     DQPNDVLMFKRSGLSIAMGNASDQVKSQATVTTDSYNDEGFAKAVERFILGDAD"
     gene            1416..2132
                     /gene="pgl"
                     /locus_tag="VHX39_00060"
     CDS             1416..2132
                     /gene="pgl"
                     /locus_tag="VHX39_00060"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010516708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HEX3989539.1"
                     /translation="MIGQIDVQPDPQALARHVAEWMTATAVASSGPFRVSLSGGSTPK
                     TLYGLLASDDFRGRFPWQRVSWYWGDERFVPYDHPESNYRMTREAMLSKAPVPPENVH
                     PVPADGTADEAALRYERALQADYGATVLDPARPMFDITLLGLGPDGHTASLLPDEPVL
                     NERKRWVAAVSHGRPEVRITMTYPVIDSSRYVAFLVAGQEKAAIFDQIRAGGSRVPAA
                     RVKPVGELIWFVDRAAAGAK"
     gene            2156..3217
                     /locus_tag="VHX39_00065"
     CDS             2156..3217
                     /locus_tag="VHX39_00065"
                     /EC_number="5.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF008277.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016857 - racemase and epimerase activity,
                     acting on carbohydrates and derivatives [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldose epimerase family protein"
                     /protein_id="HEX3989540.1"
                     /translation="MNSEQFGVSEDGQPIFAYTLANAAGMRVRILTLGCIIARLEVPD
                     SNGTIENVVLGLDLVDGYLHRSPHFGAIAGRYANRIARGRFAIDGTEYQLEINAPPNT
                     LHGGRHGFDKVVWQAEALDGEALVLRYLSPDGDEGFPGNLAVEVTYRVGATNDLRIDY
                     AATTDKPTIVNLTNHSYFNLAGEGSGDVLDHIVSIAADHFTPSDATQIPTGELRSVAG
                     TPFDFTQPRAIGERIRMADEQLLAAHGYDHNWVLRAPAGDGPRQAARAFDPQSGRILD
                     VLTDAPGLQFYTANGLNGALVGPAGRAYRQSDAFCFETQQFPDAPNQPGFPPAVLRPG
                     QRFRSTTIFRFSTEAARAQ"
     gene            3214..3930
                     /gene="rpe"
                     /locus_tag="VHX39_00070"
     CDS             3214..3930
                     /gene="rpe"
                     /locus_tag="VHX39_00070"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEX3989541.1"
                     /translation="MNRRLPVAHDADSPILIAPSVLSADFTRLGEEVRAVDAAGADWI
                     HVDVMDGRFVPNITMGPLVLEAIRRSTAKPLNVHLMVVEPERYLEIFAKSGADHLLVQ
                     AEPGSTIHLHRVLTQIRSLGKKAGVVLDPASPPELIEYVLHLCDIILVMTVNPGFGGQ
                     VFLPEMLPKIRRIRAMCMERRIDPVIEVDGGENMETAAKAASAGATAIVAGSAIFGSS
                     DYKAAIAAIRRSAAAAVAAP"
     gene            3927..4643
                     /gene="rpiA"
                     /locus_tag="VHX39_00075"
     CDS             3927..4643
                     /gene="rpiA"
                     /locus_tag="VHX39_00075"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEX3989542.1"
                     /translation="MSAVTEAGRDALKREAAEAAIALVQDGMVVGLGTGSTATFAVEA
                     LARRHSQGLRFLGLPTSEHTAAQATAAGIPLTSFAAHRQIDLTIDGADEVERGTLNLI
                     KGLGGALLHEKIVAAASRRLAIIVDNLKLVDRLGTHVPVPVEVVEFGLQATWASLEAL
                     GATAKLRLSQTGEPFVTDSGNRILDCSFGPIADPAGLEERIGRIVGVVESGLFINRAD
                     WVFVADPTGVHRLTGPRSNT"
     gene            4828..7233
                     /locus_tag="VHX39_00080"
     CDS             4828..7233
                     /locus_tag="VHX39_00080"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HEX3989543.1"
                     /translation="MAPGSPGIRPRWTSSAKDLVGTAMGPSRLWVTVGYGIVNEVYYP
                     RVDSPQIRDLGFIVADGKGFWVEVKRNFDYTVTTPGAGIPAVEILHRHARFELRLRIA
                     PDVMRDVLLIEAILTGDADLKLYALLAPHLEGTGLNTMAEVFEDRDRMVLGAEQGPYG
                     IALAAVDATTQRDAWERASAGFVGTSDGWQDFAANGAMTWTYPQAGPGNVALLGELNR
                     RQVVLALGFGSDREAAATLAISALLQPFEAAWRRHIVAWEGWHADNVDSGGCLPEFRD
                     MMHISAMVLRTHHDKTYRGGMVASLSIPWGNATGDVGGYHLVWPRDLVESAGALLAAG
                     GTDYAREILCYLMASQLADGHWEQNQWLSGRPRWTGTQLDEVAFPVLLASHLGEDDEL
                     GGIQVQDMVQRALRFIMLNGPASDQERWEELDGINTFTLAAAIAALVCGAHILGGEVQ
                     RDILLFADDWNARIEEWCTGANPELAARFNVGRYYVRGAPAAIMGRRTAITDLIPIRN
                     HPSEFLVPADTLIATDFLQLVRFGLRLPDDPAIVATVKLADAMLKVDTPSGPSWHRYN
                     DDGYGEHADGSPFDGSGVGRAWPLLTGERGHYELAAGRDEEAQTLLRAMKNMSGRGGL
                     IPEQIWDSAAVPEQNLFPGRPAGSAMPLVWAHAEFVKLTKSLSLGRAVDRPEPVWLRY
                     GGVKPHAVRAHWTRNMQVGTIQAGQTLRLVFAEPALVHWGIDDWQHPQDTLTASGMLD
                     LQVAEIASDTLAPGQRLVFSIRDLTTGTWFEHDRVIEVVAADAMVQGMPAAGTHINRA
                     AAD"
     gene            complement(7394..8476)
                     /locus_tag="VHX39_00085"
     CDS             complement(7394..8476)
                     /locus_tag="VHX39_00085"
                     /inference="COORDINATES: protein motif:HMM:NF012432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HEX3989544.1"
                     /translation="MSGYLLREVPVGIEATGMRREAHAAASGSVRADRYWGASTQRSL
                     NAGFAATDHLPDRFHRCYGIVKKAAAAANGRAGRLPSWKVEAIVRAADDLIAGRLDDH
                     FPLTVWQSGSGQETDTNVNEVLANRAIQLLGGAIGSRIPIDPAGDVNLGQSLTGMFTT
                     SLQIAIVLELEETLMPSATTLVRALDRSRVSSLAQRLRAALARIDEAEGSLHEIVMGD
                     APDSSGLSEPDWHAMAASIAGETERPFILLPGSHADPGSLDAVVAVMAAVRGLAAALL
                     DITEPPSRGSSDRVSGNRVSLDAMSMVCINVMGLDQIVASACGRGNRSPRALRPIVAM
                     SVLNAIRTIGQACLGVRRIIAPARAR"
     gene            complement(8637..>9122)
                     /locus_tag="VHX39_00090"
     CDS             complement(8637..>9122)
                     /locus_tag="VHX39_00090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989545.1"
                     /translation="STAQTEDAIAYDLAACFRNLTSGGERDLQPSASVLRNVTTGLGA
                     LFGVPANITIETKIEDVRLPAYKRRALVLAASELVSNSLLHAFRGGSVGLIEVSLTAL
                     GRTSACLHVGDNGNGFIEASPNLDCGVGAGLAGLLEADLVYDRMAGWTIAEIEFPLPG
                     S"
BASE COUNT         1722 a         2843 c         2841 g         1716 t
ORIGIN      
        1 ggaacctgac gttgcctcgg actcctccgc tgaaacctac atcgctgcaa agttcatgat
       61 cgacaactgg cgttgggctg gcgtgccgtt ctatgtgcga accggcaaat atatgaaatc
      121 ccgcaaaacc gagatcgcca ttcgcttcca ccaggcgccg tactctctgt tccgcggcac
      181 ggatgtggac cgcatgcatc ccaattggct gatcctgcgt gtgcagcccg acgaggggat
      241 cgagctcgct ttcgccgcga aacggcccgg tccaaccgtg cagttaagca ctgtcagcat
      301 ggattttgcc tacaagacgt tcttcaagat ggcgcccaat acgggttacg aaacgctgct
      361 ctatgactgc atgatcggcg acgccacgtt gttccagcgt gccgacaaca tcgaggcggg
      421 ctggcgcgcg gtgcagccga ttctggatct ctggagcgca acgaagccga cggattttcc
      481 gaattacgcc gcgggcagca ccggtccggc cgcggcggat gcgttgctgg cgcgcgacgg
      541 gcacgcctgg cgcccactcg actgacgcaa cgccacggag gttgtcatgc caaaaaaaca
      601 aaagatttca ctggtgttgg cggacgtcga cggcacgctg gtgacggaag acaaagtgct
      661 tacgaagcgg gctcaggcgg cggtccagcg gctgcgcgac gcgggcattc atttcgctat
      721 caccagcggc cggccgccga agggcatgga aatgctgttc gacgaactgc ggctcgaaac
      781 gccgatcgca ggcttcaacg gcggcttgtt cgtcaaaacg gatctctcga tcattgaaca
      841 gaagacgctg ccggaggacg tggccacgaa agcgatcgag ctgatccatg cacacggtct
      901 cgatgcctgg gtttatcgcg gcaacgactg gctgatcacc aaacagaatg cgccgcacgt
      961 cgatcgcgaa gcctggaccg tcaggtttcc gcccagggtg gtgtccgatt tcgcggggat
     1021 gttgggcgat gtggcgaaga tcgttggcat cagcgatgac ctcgacaaag tgcagcgctg
     1081 cgaggccgac gctcaggcgg cgttcgggca acgcgcgacg gcgacgcggt cgcagccata
     1141 ttatcttgac gtcaccaaca aggatgcgaa caagggagcg gtggcggact acctctcgcg
     1201 tcacctggac gtgcctcccg aggagattgc cacgttaggc gaccagccaa acgatgtgct
     1261 gatgtttaaa cgttccggcc tcagcatcgc gatgggcaac gcgtccgacc aggtgaaatc
     1321 acaggcgacc gtcacgacgg actcttacaa tgacgagggc ttcgccaaag cggtggaacg
     1381 tttcattctc ggcgatgcag attgaggcaa gcaggatgat tggacaaatt gacgtacagc
     1441 cggatccgca ggcgctggcg cggcatgttg ccgaatggat gacggcgacg gcagtcgctt
     1501 cgtccggtcc gtttcgcgtg tcattgtcag gcgggtcgac gccgaagacg ctctacgggc
     1561 tgctggcgtc tgatgatttc cgcggccgct ttccctggca acgggtgtcc tggtactggg
     1621 gcgatgagcg gttcgttccg tacgatcatc ccgaaagcaa ctatcgaatg acgcgtgagg
     1681 cgatgctttc caaggcgccg gtgccgccgg aaaacgtcca cccggtgccg gcggacggca
     1741 cagccgatga ggctgccttg cgttatgaac gcgcgctgca ggcggactat ggcgcgacgg
     1801 tgctggatcc ggcgcggccg atgttcgata tcactttgct cgggctcggg ccggatgggc
     1861 ataccgcatc gctgctgccc gatgagccgg tgttgaatga gcgcaaacgc tgggttgccg
     1921 ctgtctcgca tggacgcccc gaggtccgta ttacaatgac ctatccggtg atagacagca
     1981 gcaggtacgt ggcttttctg gtcgccggac aggagaaggc ggcgatcttc gatcagatcc
     2041 gtgccggtgg cagccgagtg cctgccgcgc gggtgaagcc ggtgggcgag ctcatttggt
     2101 ttgtcgatcg ggcggccgcc ggagccaaat aacgatcctt accctgaagg aagcgatgaa
     2161 cagcgaacaa ttcggcgtca gcgaagacgg tcagcccatt tttgcctata cactcgcaaa
     2221 cgccgcgggc atgcgggtgc gcattctgac gcttggctgt atcattgcgc gcctggaagt
     2281 gcccgacagc aacgggacga ttgagaatgt cgtgctcggg ttggatttgg tcgacggcta
     2341 tttgcaccgc agtccgcatt tcggggcaat tgccggccgc tacgccaacc gtatcgcacg
     2401 gggccgcttc gccatcgacg gcaccgaata ccagcttgaa atcaacgccc cgccaaacac
     2461 cctgcacggc gggcggcacg gctttgacaa ggttgtctgg caggccgagg ccctcgatgg
     2521 cgaggcgctg gtcctgcgct atctgagccc tgatggtgac gaaggctttc ccggcaatct
     2581 cgccgtggaa gtgacctatc gtgtcggcgc caccaacgat ctgcgcatcg attatgccgc
     2641 gacaaccgat aagccaacca tcgtcaatct gaccaaccac agctatttca atctcgccgg
     2701 agagggttct ggtgacgtgc tggaccatat cgtttccatt gccgcagatc acttcacgcc
     2761 ctccgacgcg acccagattc ccaccggaga acttcgatcc gttgccggaa cgccgttcga
     2821 cttcacccag ccgcgggcca tcggagaacg catccgaatg gcggacgagc aactgttggc
     2881 cgcccatggc tatgatcaca actgggtgct ccgggcgccg gcaggtgacg gtccgcgtca
     2941 ggccgcgcgc gcattcgatc cccaatccgg ccgcattctc gatgtcctga ctgatgctcc
     3001 cggccttcag ttctatacgg ccaacggtct gaatggcgct ttggttgggc cggccggccg
     3061 ggcctatcgg cagagcgatg cattttgctt cgagactcag cagtttcccg atgcgcccaa
     3121 tcagcccggc tttccgccag ccgtgctgcg gccgggccaa cgctttcgct ccaccacgat
     3181 tttccgcttc tcgaccgagg ccgcgagagc acaatgaaca ggcgcctccc tgtagcccat
     3241 gacgctgatt caccgatcct tattgcgccg tcggttttgt cagcggattt cacgcgcctg
     3301 ggtgaagagg tgcgcgccgt cgatgcggcc ggtgccgact ggatccatgt cgatgtgatg
     3361 gatggccgct tcgtgcccaa tattaccatg ggaccgctgg tactcgaggc gatccgccgc
     3421 tcgaccgcaa agccgcttaa cgtgcacctt atggtcgtcg agccggaacg ctatctcgag
     3481 atatttgcaa aatccggtgc cgaccatttg ctggttcagg ccgaacccgg gtccacgatc
     3541 cacctgcatc gcgtgctgac ccagatccgc tcgcttggca agaaagcggg cgttgtgctc
     3601 gatcctgcaa gcccgccgga gctgatcgaa tatgtgctac atctgtgcga tatcattctg
     3661 gttatgacgg tcaatcccgg gttcggtggc caagtcttct tgcccgagat gttgccaaaa
     3721 atacgccgca tccgggcgat gtgcatggaa cgccgcattg acccggtgat tgaggtcgat
     3781 ggaggagaga acatggaaac agctgccaag gctgcttcag ccggggccac tgccatcgtt
     3841 gccggctcgg cgattttcgg cagcagtgac tacaaggcgg ccatcgcagc catccgtcgg
     3901 agtgccgccg cggccgtggc cgcaccatga gcgccgtaac agaggccggc cgcgacgcgc
     3961 tcaagcgcga agcggcggaa gcggccatcg cactcgtgca agatggcatg gttgtcggac
     4021 ttggcaccgg ctcgacggcc acttttgcgg tcgaggcgct cgcccggcgt cacagccagg
     4081 gattgcgctt tcttggactt cccacttcgg aacacaccgc ggcacaggcg accgcggcgg
     4141 gcatcccgct cacctcgttc gcggcgcacc ggcaaatcga tctcaccatc gacggagccg
     4201 atgaggtgga acgcggcacg ctcaacctga tcaagggtct gggcggcgcg ttgctgcacg
     4261 agaaaattgt tgctgctgcc agccggcgcc tcgccatcat cgttgacaac ctgaaactcg
     4321 tcgatcgtct gggcacgcat gttccggtcc ctgtcgaggt cgtggaattc ggcttgcagg
     4381 caacctgggc ttcgctcgag gcgctgggtg ccacggcaaa gctgcgcctc tcgcagaccg
     4441 gtgaaccgtt cgtcactgac agcggcaatc gaattcttga ttgcagcttc ggcccgattg
     4501 ccgatccggc aggattggag gagcgtatcg ggcgcatcgt cggtgtggtc gaaagcggcc
     4561 ttttcatcaa tcgggccgac tgggtcttcg tcgccgatcc gaccggcgta catcgcctga
     4621 ccgggccgcg cagcaacacc tgacaggcgc cgcgcctcgc gaacccccgg tggttcgaaa
     4681 tcgcaagaga actacgcagg ttcaggcgat ttcgaaatac agacattcag tcgcgactat
     4741 tgtaagcaca gttcaaatac tcgatggggt tgccgacatg atgaaccggc cggttaaggt
     4801 gttctgcttt ggcggggtcg tgcgatgatg gcccctggca gcccaggcat ccgtccgaga
     4861 tggacgagca gtgccaaaga tctggtcggg acggccatgg ggccatcgcg gctgtgggtg
     4921 accgtcggtt acggcattgt caacgaggtt tactaccctc gcgtcgactc gccgcaaatc
     4981 cgcgatcttg gattcattgt tgccgacggc aagggcttct gggtcgaggt caagcggaac
     5041 ttcgactaca ctgtcacgac acctggtgcc ggcatcccgg ccgttgaaat cttgcaccgg
     5101 cacgcgcgct tcgaactccg cctgcggatc gcgcccgacg tcatgcgcga cgtgctgttg
     5161 atcgaggcga tcctgaccgg ggatgccgac cttaaacttt acgcgctgct cgcgccgcat
     5221 cttgaaggga ccggtctgaa tactatggct gaagtcttcg aggaccgtga ccgcatggta
     5281 cttggcgcgg aacaaggtcc gtatggcatc gctctggcgg ccgtcgacgc aacgacccag
     5341 cgcgacgcct gggaacgcgc cagcgccggc ttcgttggca cgagcgacgg ctggcaggac
     5401 tttgccgcca atggtgcgat gacctggacc tatccgcagg ccgggccagg caacgttgcg
     5461 ctgcttggag aattgaaccg gcgccaggtg gtgcttgcgc ttggcttcgg cagcgatcga
     5521 gaggcagccg cgacgctcgc catctctgcc ctgttgcagc cgttcgaggc cgcgtggcgc
     5581 cgccacatcg tcgcctggga aggctggcat gcagacaacg tcgacagcgg cggctgctta
     5641 cccgagttcc gcgacatgat gcacatctcc gccatggtcc tgcggacgca tcacgataag
     5701 acctatcggg gtggcatggt tgcaagcctc agtatcccat ggggcaacgc caccggagat
     5761 gtcggtggct atcatctcgt ttggccacgc gatcttgtcg agagtgccgg cgcccttctg
     5821 gcggccggcg ggaccgatta tgcgcgcgag attctgtgct acctgatggc gtcgcagctc
     5881 gcggacgggc attgggagca gaaccagtgg ctcagcggcc ggccgcgctg gaccggcaca
     5941 caactggacg aggtggcctt tccggtcctg ttggcctcac acctcggtga ggacgacgag
     6001 ctcggcggca tccaggtgca ggacatggtc cagcgggcac tgaggttcat tatgctgaac
     6061 gggcctgcca gcgaccagga acgctgggaa gagcttgacg gcatcaatac attcacgctt
     6121 gctgcagcga tcgccgccct cgtctgtggc gcccacatcc tgggcggcga agttcagcgc
     6181 gatatcctgc tgtttgcgga tgattggaac gcgcgtatcg aggaatggtg caccggggca
     6241 aaccccgagc tggccgctcg cttcaatgtc ggacgttact acgtgcgtgg tgcgcctgcc
     6301 gccatcatgg gacggcgtac cgccatcacc gaccttatcc ccatccgcaa ccatccgagc
     6361 gaatttctcg tccccgccga cacgttgatt gccacggatt ttctgcaact cgtccgtttt
     6421 gggttgcggc tacccgacga tccggcgatc gtcgcgacgg tgaagctcgc cgatgcgatg
     6481 ctgaaggtgg atacgccgag cggaccaagc tggcatcgtt acaacgacga tggctacggt
     6541 gagcacgccg acgggtcgcc gttcgacggt tccggtgttg gccgggcctg gccgctactg
     6601 accggcgagc gtggccatta cgaactggct gcgggacgtg acgaagaagc ccagacattg
     6661 ctgcgcgcga tgaagaatat gagtggacgt ggcgggctca ttcccgagca gatctgggac
     6721 agcgcggcag tgccggaaca aaatctgttt cctggtcgcc ccgccggctc cgcaatgccc
     6781 ctggtctggg ctcatgccga attcgtcaag cttaccaaaa gcctctccct gggccgtgcg
     6841 gtcgatcggc ccgagccagt ctggctgcgc tatggcggcg tcaaacccca cgccgtgcgg
     6901 gcgcattgga cccggaatat gcaggttggg accattcagg ccggtcagac actgcgcctt
     6961 gtcttcgccg agcccgcgct ggtgcattgg ggcatcgacg actggcagca cccgcaggac
     7021 acccttacgg catcggggat gctcgacctg caggtggccg aaattgccag cgatacactg
     7081 gcgcccggtc agcggcttgt gttttccatc agggatctga cgaccgggac ctggttcgag
     7141 cacgaccgcg tgatcgaggt cgtcgcggca gacgcgatgg tgcagggaat gccggcggca
     7201 ggcactcaca tcaaccgggc tgcggcggat taaggcgagg ggctccgcgt cttctccgtg
     7261 ctcgtcacgg ggaccgatcg cagcagagtg ctggtagccc atggagggcg agtccgtcgc
     7321 tcgaatccgc ggttgctttg cgtcagccaa gtaacgaatc gccgccggcg acgatgatcg
     7381 ccggcgccaa cggtcacctg gctctggctg gagcgatgat cctccgtacg cccaggcagg
     7441 cctgaccgat cgtacgtatg gcgttgagca ccgacatggc aacgatcggc cgcagtgcgc
     7501 gcgggctgcg gttgccacga ccgcaggcgg acgcaacgat ttggtccagg cccatgacgt
     7561 tgatgcaaac catcgacatc gcatcgagcg acacccgatt gcccgacacc cgatcggaac
     7621 tgccacggct cggcggctcg gtgatgtcca atagcgccgc cgccaatccc cggacagccg
     7681 ccatcaccgc aaccaccgcg tcgagcgacc cgggatctgc gtggctacct ggaagcagaa
     7741 taaacgggcg ttccgtctcg ccggcaatcg acgccgccat ggcatgccag tccggctcgg
     7801 ataaaccgga actgtcaggt gcatcgccca tgacgatctc gtgcagactg ccctcggcct
     7861 catcgatccg tgccagagcg gcacgcagcc gttgcgcgag cgatgacacc ctggaacgat
     7921 cgagcgcacg caccaatgtc gtggccgacg gcatcagcgt ttcttccagc tccagcacga
     7981 tcgcgatttg caacgacgtg gtgaacatcc cggtcaggct ttgtccgagg ttcacgtcgc
     8041 cggcaggatc aatcggaata cggctaccaa tcgctccgcc caacagctgg atcgcccggt
     8101 tcgccaggac ttcgttgaca ttcgtgtcgg tctcctgacc ggaaccggat tgccaaacgg
     8161 tgagcggaaa gtggtcatca agcctgccgg cgatcagatc gtcggccgca cggacaatcg
     8221 cttcaacctt ccatgacgga agacggccgg cacgtccatt cgccgccgcc gccgccttct
     8281 tcacaatgcc gtaacagcga tggaagcgat cgggaaggtg atcggtcgcg gcaaaaccgg
     8341 cgttcaacga acgttgcgtc gaagcacccc aataccgatc cgcccgcacc gaaccagagg
     8401 ccgcggcgtg tgcctctcgc cgcatcccgg ttgcctctat gccaactggt acctcgcgta
     8461 aaaggtagcc gctcaaaagg ttcggccttt ccaccgtggt cttgttgggc gaagaagccg
     8521 tcgcctgcct agccacagcc caccccatac ctgattcctc ttttctctcc cttgttattg
     8581 caaaattgct cacgtctttc gaaatcgcac gatcggcgtg ccaaccaacg acggacctat
     8641 gatccgggga ggggaaattc gatctcggcg atcgtccacc ccgccatgcg gtcgtagaca
     8701 aggtcggctt ccagcagacc ggcgagtccg gcgcccaccc cacaatcgag attgggcgat
     8761 gcttcgataa agccattgcc attgtcaccc acatgcagac acgcagaagt tcggccgagg
     8821 gccgtcagac taacctcgat caggccgacc gagcctcccc tgaacgcatg caacagagaa
     8881 ttgctgacca gttcggacgc cgccaggaca agcgcgcgtc gcttgtaggc cggcagccgc
     8941 acgtcctcga ttttggtttc gatggtaatg ttggccggca caccgaacag cgcgccgaga
     9001 cccgtcgtga cattccgcag caccgaggcg ctcggctgca aatcgcgttc tccgccagac
     9061 gtcaggtttc tgaaacaagc cgccagatcg taggcgatgg catcctctgt ctgggctgtg
     9121 ga
//
LOCUS       DATAVD010000005         1635 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_186330, whole genome shotgun sequence.
ACCESSION   DATAVD010000005 DATAVD010000000
VERSION     DATAVD010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1635
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186330"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..578)
                     /locus_tag="VHX39_00095"
     CDS             complement(<1..578)
                     /locus_tag="VHX39_00095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX3989546.1"
                     /translation="MSIAIVTGSGGLVGSETTRLFLDKGLDVAGIDNDMRGTFFGPEA
                     STRWQVDLLTSQPGYTHHPADIRDAQAINKIFARYGRDIAAVIHCAAQPSHDWAVKDP
                     VADFTINANGTQTLLEATRQHAPDAAFVFVSTNKVYGDRPNHLPLVEHETRFELTPTH
                     EWAERGFPEDMPIDQCLHSLFGASKVAADVLV"
     gene            889..1527
                     /locus_tag="VHX39_00100"
     CDS             889..1527
                     /locus_tag="VHX39_00100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989547.1"
                     /translation="MSLHDVFSRQIMAFHRAIIDDCNRAARPNRNDAMALRLRSNALA
                     LAKIQLAMLALTGAELPMAEREAEPWHDLEPTESLTADPRAPDSLAPDSLAPAPLAAD
                     PLAAAQLTLDPMAPDPTAPIPLTPDAMTFDPLAFDPLASDPLASAPLASDPPAFDGER
                     VLAGDALSRFVSRPLAAGESPHEVWQKALENDPVRRQRNPVLPRPGFRSPSA"
BASE COUNT          264 a          545 c          515 g          311 t
ORIGIN      
        1 tgcaccagca cgtccgcggc gaccttggag gcgccaaaca ggctgtgcag gcactggtcg
       61 atcggcatgt cctcagggaa accgcgttcg gcccattcat gggtcggggt gagttcgaag
      121 cgggtttcgt gctcgaccag aggcaagtgg ttgggccggt cgccgtaaac cttgttggtg
      181 ctgacgaaca caaaggcggc gtcgggggcg tgctgccgcg tggcctccaa cagcgtctgg
      241 gtgccgttgg cgttgatggt gaaatcggcg accgggtcct tgaccgccca gtcgtgcgag
      301 ggctgcgcgg cgcagtggat gacggctgca atgtcccggc cgtagcgggc gaagatcttg
      361 ttgatggctt gggcgtcgcg gatgtcggcc gggtggtggg tgtagccggg ttggctggtg
      421 agcagatcga cctgccagcg cgtgctggcc tcggggccga agaaggtgcc gcgcatgtcg
      481 ttatcgatgc cggcgacgtc caggcccttg tcgagaaaca atcgggtggt ttccgaaccg
      541 acaaggccgc ccgaacccgt tacgatcgct atggacaccg cttatcgcct tccttcttct
      601 cctggcatcg cccgggaatc cgctcggtct tgtcgtcctg caacccattg cgaccgcgat
      661 gggcgccggc attccctccg gttatcaatc cggtcgtggc cccggttgat gtccaacacc
      721 agccatcgag cacaagccgc atcgatgccc gctttttaac acaggggcag aacgagggcc
      781 acgcagaagg gtgatcgttt ctctgctcgg cgttttttct catgccgagc gatcttgact
      841 attttcctaa caattccctt attgttgcaa acaacctcgg acgtgcggat gtcccttcac
      901 gacgttttct cccggcagat catggcgttc cacagagcca tcatcgacga ttgcaaccgc
      961 gcggcccgtc cgaaccggaa cgatgcgatg gcgctgcggt tgcggagcaa cgcactggca
     1021 ctggccaaga tacagcttgc catgctggcg ctgaccggtg ccgaattacc catggcggag
     1081 cgcgaagccg agccctggca tgatctggag ccgaccgaat cgctgacggc cgaccctcgg
     1141 gcaccagact ctctggcacc cgactctctg gctcccgccc ctctggcggc agaccctctg
     1201 gcggccgccc agctgacact cgacccgatg gcacccgacc cgacggcacc catccccctg
     1261 acacccgacg ccatgacatt cgaccccttg gcgttcgacc ctctcgcatc cgaccctctg
     1321 gcatccgccc ctctggcgtc cgaccctccg gcgtttgacg gcgaacgcgt gctggcgggg
     1381 gatgcgctat cgcgtttcgt ctcgcgcccg ctggcggccg gcgaatcgcc gcatgaggtc
     1441 tggcagaagg cactggagaa cgacccggtt cggcggcagc gcaacccagt gttaccgagg
     1501 ccaggcttcc ggtcgccgtc cgcctgatgt aaacggcccg ccaccgtagg ccggagcttg
     1561 catgaccgcc ccgttttcac cggcgtccct tggggcctcc ccaaggctgg acgtgacgac
     1621 cccgctgatc ctggc
//
LOCUS       DATAVD010000006         3410 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1489540, whole genome shotgun sequence.
ACCESSION   DATAVD010000006 DATAVD010000000
VERSION     DATAVD010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3410
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1489540"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            214..2073
                     /locus_tag="VHX39_00105"
     CDS             214..2073
                     /locus_tag="VHX39_00105"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX3989548.1"
                     /translation="MIGWIRSRFDALLALVMRARAVRSRHLMLLWLAGSAAIVVVTWV
                     CFALRLGAGSVGFAYLIAIVLLSLFDSFISSTIFSLIAVACLDFFFTQPLFTFDIASS
                     EDILTVIAFVTTSFIITALVRRLRDLAAAHSDQVQLLNLTHDSIFVRDSNDVIVFWNR
                     GAEELYGWTQQEAPGRTSFDLLRTKFPAPLQDLKQELLRTGRWEGELLRTKSDGTQIS
                     VASRWSLQRDANGRPTATLETSHDITERKRAEEALRRTQATYLAEAQKLSCTGSFGWN
                     TVTGDITWSEESFRIFGFPPTLKPTLEAIMGRVHPDDVAQVEGVIGHALREKEDLDFE
                     HRLLMPDGSVRHLHIVARIVTDEPGCLQFAGAMMDITAARRAQEQLQQAQAELAYITR
                     VMTLGELTASIAHEVNQPLAAIVTSGDASLRFLALDPPQLDEVRDALQRMISDGRRAS
                     DVVQRIRALTRRSEPRSVAVDLNHVIRDSVVLVRREVASQRVAMQLDLMPELPSVSGD
                     AVQLQQVVINLIINGIQAMESVTDRVCELLIRSGRSDAGEVLVSVQDSGAGIDPQHLN
                     RLFDAFFTTKPDGMGMGLAICRTIIEAHGGRLWATGNAGPGATFQFSLPAIEP"
     gene            2160..2705
                     /gene="def"
                     /locus_tag="VHX39_00110"
     CDS             2160..2705
                     /gene="def"
                     /locus_tag="VHX39_00110"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEX3989549.1"
                     /translation="MSVRPPDTIPILIAPNPILKAKAKPVGKADDAAVRDLAAKMLAS
                     MYLAPGIGLAAPHVGQSLRLITIDLMPDDKPAPMTLINPEIVALADELAAREEGCLSL
                     PGQYAEVTRPARCKVRYLDLTGARREIEADGLLNACLQHEIDHLEGVLFVDHLTALRR
                     NIIMRRLAKEQRQKRDDDKRR"
     gene            2763..>3410
                     /gene="fmt"
                     /locus_tag="VHX39_00115"
     CDS             2763..>3410
                     /gene="fmt"
                     /locus_tag="VHX39_00115"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEX3989550.1"
                     /translation="MRLAFMGSPDFSVPALRALHAAGHEIAAVYCQPARPAGRGQAVR
                     RCAVQVEAEWLGLPVRTPPRLRTAAGEWEAFEALQLDAAVVAAYGLILPQPMLQAPRL
                     GCLNIHASLLPRWRGAAPIQAAILAGDTTTGITIMQMDAGLDTGPMLLQEAVPITPAT
                     TTATLHDILAGLGARLVLTALGGIPQPVPQPEADATYSGKLSREDGRIDWTQDALL"
BASE COUNT          605 a         1084 c         1084 g          637 t
ORIGIN      
        1 ctacataaac cggacaagtt aattagctat cgacagtcca tccatggttt ggcgggtacg
       61 gcggtggagg gctgccggcc gccttcgagt cgcccagagg gctggaaggc cgccgtgccg
      121 acgcggcctc cacgtggaca ctctgatcgc ccaggcctag gagtccacgc atcagtgttc
      181 ggccaagaaa tggctcgtgg gaccggagtg tggatgatcg gctggattcg cagtcgcttt
      241 gacgcgttgc tggcgctggt gatgcgtgcg cgggcggtac gcagccggca cctcatgctg
      301 ctttggctgg ctggttcggc cgcaattgtc gtcgtgacct gggtatgctt cgcgctccgc
      361 cttggcgccg gctccgtcgg cttcgcctac ctgatcgcca ttgtcttgct gtccctgttc
      421 gacagtttca tttcatccac catcttctcg ttgatcgccg ttgcctgcct cgactttttc
      481 ttcactcagc cgctgttcac ctttgacatt gccagctccg aagacatcct gaccgtcatc
      541 gctttcgtta ccacatcgtt catcatcacc gcgttggtgc ggcgcctgcg ggacctggcg
      601 gccgcccaca gcgatcaggt ccaactgctt aatctcaccc atgattccat cttcgttcgc
      661 gacagcaacg acgtgatcgt cttctggaat cgcggcgccg aggaactgta tgggtggacc
      721 cagcaggagg cgcccggcag gacatcgttc gaccttctgc gaacgaaatt ccctgccccg
      781 ctacaggacc ttaaacagga gctgctgcgt accgggcgtt gggagggcga gttgcttcgt
      841 accaaaagcg acgggacgca aatctcggtg gcgagccggt ggtcgctgca acgggatgcc
      901 aacggccgtc ccaccgcgac gctcgaaacc agccatgaca ttacggaacg caaacgggcg
      961 gaagaagccc tcaggcgaac tcaggccact tacctggccg aggcgcagaa attgagctgc
     1021 accggcagct tcggttggaa caccgtgacc ggtgacatca cgtggtcgga ggagagtttt
     1081 cgaattttcg gttttcctcc taccctaaaa ccgacactcg aagcgatcat gggccgcgtg
     1141 catccggacg acgttgccca ggtggaaggt gtgatcgggc atgcgttgcg agagaaggag
     1201 gatttggatt tcgagcatcg attgttgatg ccggatggat cggtcaggca tcttcacatc
     1261 gtcgctcgca ttgtgaccga tgaacctggc tgcctgcagt tcgccggcgc gatgatggac
     1321 atcacggccg ccagacgcgc gcaggaacag ttgcagcagg cgcaggccga gcttgcctat
     1381 atcacgcgag tgatgacgct aggcgaactc accgcatcga tcgcccatga agtgaaccag
     1441 ccgctggccg cgatcgttac cagcggcgat gccagtctgc ggtttctcgc gctcgacccg
     1501 ccacagctcg atgaagtgcg ggatgccttg cagcgcatga tcagcgacgg caggcgagcg
     1561 agcgacgtcg tgcagcggat ccgtgccctg accaggcggt ctgaaccgcg atcggttgcg
     1621 gtcgatctga accatgtcat ccgcgacagc gtcgtgctgg tgcgacgcga ggtggcttcg
     1681 cagcgcgtcg cgatgcagct ggacctcatg cccgaattgc catcggtatc cggcgacgcc
     1741 gtgcagcttc agcaggtggt catcaacctg atcatcaacg ggatccaggc gatggaatcg
     1801 gtgaccgatc gggtctgcga gttgctgatc cgctcgggcc gcagcgacgc cggcgaggtg
     1861 ctcgtttcgg tacaggattc cggcgccggc attgatccgc agcatctgaa ccggctgttc
     1921 gacgcgttct tcaccacgaa accggacggc atggggatgg ggctggcgat ttgccggacc
     1981 atcatcgaag cgcatggcgg ccgcttgtgg gcgaccggca atgccggccc aggtgcgacg
     2041 tttcagttca gtctgccggc gatcgagccc tgagcggcag gccggtcaac ggtggcattt
     2101 cattgccatt ccggtcgccg ggcattgatc cgcctggcga cgagttctac atccgatcca
     2161 tgtcagtccg cccccccgac acgatcccga tcctgatcgc gccgaacccg atcctgaaag
     2221 ccaaggccaa accggtcggc aaggccgatg acgccgccgt ccgcgatctg gcggcgaaaa
     2281 tgctcgcgtc catgtatctg gcgccaggca tcggcctcgc cgcgccgcat gtgggacaat
     2341 cgctgcggct gatcaccatc gacctgatgc ccgacgacaa accggcgccg atgacgctga
     2401 tcaatccgga gatcgtggcg ctggccgatg agctcgccgc ccgcgaggag ggctgcctct
     2461 cgctgcctgg ccaatacgcc gaggtgacgc ggccggcacg ctgcaaggtg cgctatctgg
     2521 acctgaccgg cgctcggcgt gagatagaag cggacggcct gctgaacgcc tgcctgcaac
     2581 acgaaatcga ccatctggag ggggtgttgt tcgtcgacca tctcactgcg ctcaggcgca
     2641 acatcatcat gcgccggctc gcgaaagagc aacggcagaa gcgcgatgac gacaaacggc
     2701 ggtagcgccg ccgggttcgg acgcgcaacg ttgcggccgg accggcattg aggcgctgat
     2761 ccgtgcgcct cgcattcatg ggcagtcccg acttttccgt tcctgccctc cgcgcgctgc
     2821 acgcagcagg acacgaaatc gcggcagtct attgccaacc agcgcgaccc gccggacgcg
     2881 gccaggcggt gcggcgctgt gcggtgcagg ttgaggctga atggctcgga ctaccggtcc
     2941 gcaccccacc tcgcctgcgc accgctgccg gggaatggga ggcgttcgag gcattgcagc
     3001 tcgatgcggc agtggtggcc gcgtacggtc tgatattgcc gcagcccatg cttcaggcgc
     3061 cgcgcctggg ctgtctgaat atccacgcca gcctgctgcc gcgctggcgt ggcgctgcgc
     3121 cgatccaggc cgcaatcctg gccggcgata caacgaccgg gatcaccatc atgcaaatgg
     3181 acgccggtct cgataccggc ccgatgctgc tgcaggaagc cgtgccgatt acgccagcca
     3241 ccaccactgc gacgctgcac gatatcctgg ccgggttggg cgcgcggctg gtcctgaccg
     3301 ctttgggggg gattccgcag ccggtgccgc aacccgaagc ggacgccact tactccggca
     3361 aattgtcccg cgaagatggg cggatcgatt ggacacagga cgctcttctg
//
LOCUS       DATAVD010000007         4101 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1489645, whole genome shotgun sequence.
ACCESSION   DATAVD010000007 DATAVD010000000
VERSION     DATAVD010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4101
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1489645"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..762
                     /locus_tag="VHX39_00120"
     CDS             <1..762
                     /locus_tag="VHX39_00120"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3989551.1"
                     /translation="LGLEGTMLIGASVGFAAASVTDDPYLGLLAAGLAGTAANLLFGY
                     VVISRRANQLAAGLTLMFFGFGASALIGRPFVGAIVPEPAEPAGFDPLVWLAVPTAVA
                     MWCVIFRTRWGLGLRAVGEDPAAAFASGRRPERFRYQALLLGGFLGGIGGAHLSLALT
                     MTWDDGMTAGRGFIAIALVIFARWNPLWAVPGALVFGGAEALQLQLQARGVEVSPFLM
                     NMTPYVLTLLILVVCGWTRSSAAPAALGRNFFGVE"
     gene            794..1855
                     /locus_tag="VHX39_00125"
     CDS             794..1855
                     /locus_tag="VHX39_00125"
                     /inference="COORDINATES: protein motif:HMM:NF014647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX3989552.1"
                     /translation="MRLRLLIPFWLLLLCALPAAAQTKLAVGAIYVGSVHDYGYNEAM
                     HDGLVAMKKAVPGVTLLEAENVPETAESTRIMEGMIQHGAKLIFATSFGHQQFAFDLA
                     KQHPDVDFEHAGGWMQAANFGNFFGATQAAWFPMGVAAGKMTKSNTLGFVAGVPIGYV
                     IGNINAFALGARSVNPKAEVRVVVTGGWSDKAKEAAAANALIDQGADVITMHVDSPAT
                     VIQTAEHRGVYSIGFQSIAAKALAPKFWVTGLGFTWGPFMTETAKSVMAGSFKPAMVR
                     EGLGQMMAIASFGPAVPATTRALVTAAAEKVEKGYNPFTGPLTDNTGVVRIKDGDSWG
                     GDKMGNFDWYVEGVIGKPK"
     gene            1936..2337
                     /gene="hpxZ"
                     /locus_tag="VHX39_00130"
     CDS             1936..2337
                     /gene="hpxZ"
                     /locus_tag="VHX39_00130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxalurate catabolism protein HpxZ"
                     /protein_id="HEX3989553.1"
                     /translation="MLEINIPEVVAEVTAAFMRYERALIANDVAELDSVFWDSSHTLR
                     FGINENLYGHDEIASFRSGRPAMDLTRDLRNTVITTYGRDVGTANTEFQRVGGKIPGR
                     QSHVWLRTDDGWRIAAAHVSLLLPFGQATVP"
     gene            2423..3730
                     /locus_tag="VHX39_00135"
     CDS             2423..3730
                     /locus_tag="VHX39_00135"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493858.1"
                     /note="This protein belongs to a clade of FMN-dependent
                     monooxygenases, within a broader family of
                     flavin-dependent oxidoreductases, the luciferase-like
                     monooxygenase (LMM) family, some of whose members use
                     coenzyme F420 rather than FMN; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NtaA/DmoA family FMN-dependent monooxygenase"
                     /protein_id="HEX3989554.1"
                     /translation="MSQSPFHLGWFVNFTPGDWDSDFAVGGAPWDGKFYIDMAQALER
                     ACFDYIMLEDTVMVSESYGGSTEAALRHALFVPKHDPMPLAALLGAATKHLGVVATMT
                     TLAYPPFLLARLCSTLDHLTGGRFGWNIVTSGEDAAAQNFGLEKLPPRELRYEMADEY
                     VDLVCRLFDSWDPDAVVMDRERGIYADHTKVRPIHFAGKYFKSRGPLNTVRSPQGRVA
                     FVQAGGSPRGRAFAARWADSIIATANGIEGMKAYRDDVRAHAVSFGRNPDDIKVLFLI
                     YPFLGDTEAEARAKHQRLVNSPKFIEMTLAFISSITDIDFSKFPLDEPLPRLTTNGEQ
                     GSLDKFCQWGTNKTLRTLAAERFGAPDDINLIGTPRQVAATMGEVMQDVGGDGFLIST
                     PFQRTSRRYITEITEGLVPALQALGLTRTAYSKPTLRETLTEF"
     gene            complement(3747..>4101)
                     /locus_tag="VHX39_00140"
     CDS             complement(3747..>4101)
                     /locus_tag="VHX39_00140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX3989555.1"
                     /translation="YLFISHNLAVVYQMADRVGVMYLGRLVEVAAADRLFATPRHPYT
                     RLLLDTIPRVDMMGREREPVAGEVPNPIRPPPGCGFHPRCPFADDRCRYERPELLEVG
                     ETLVACHAAEEGRLA"
BASE COUNT          742 a         1293 c         1267 g          799 t
ORIGIN      
        1 ctcggcctgg agggcacgat gctgatcggc gcgtccgtcg gctttgccgc ggcgtcggtc
       61 accgatgatc catatcttgg gctgttggcc gccggcctcg ccggtaccgc cgccaacctg
      121 ttgttcggtt acgttgtgat cagccgccgc gccaaccagc tcgccgccgg cctgaccttg
      181 atgttcttcg gcttcggcgc cagcgccctg atcggccgcc ccttcgtcgg cgccatcgtt
      241 cccgagccgg cagaaccggc ggggttcgat cccctcgtct ggcttgcggt gccaacagcg
      301 gtcgcgatgt ggtgcgtcat cttccgcaca cgctggggcc tcggcctccg cgccgtcggc
      361 gaggaccccg ccgccgcgtt cgcctccggc cgccgtcccg aacgctttcg ctatcaggcg
      421 ttgcttctgg gcggcttcct cggcggcatc ggtggagcgc atctgtccct ggccctgacc
      481 atgacctggg atgatggcat gactgccgga agaggcttca tcgccatcgc tctggtcatc
      541 ttcgcccgct ggaacccgct gtgggctgtg ccgggcgctc tggtgttcgg tggggccgag
      601 gcgcttcaac tacaactcca ggctcgcggc gtggaggtct cgccgttcct gatgaacatg
      661 accccatacg ttctgacgct gctgatcctg gtggtctgcg gctggacccg aagctccgcc
      721 gcacccgcgg cgttgggccg caatttcttt ggcgtggaat gatccgcccg atgcgatcga
      781 ggagacaacg accatgagac tccggttgct tattcccttc tggctgctgc ttctgtgcgc
      841 gttgccggct gccgcgcaga ccaaactcgc cgtcggcgcg atctacgtcg gatcggtgca
      901 cgactacggc tataacgaag cgatgcacga cgggctcgtg gcgatgaaaa aagccgtccc
      961 cggcgtcact ctgctggaag ccgagaacgt gccggagaca gcggaatcca cccgcatcat
     1021 ggaaggcatg atccaacacg gtgcgaagct gatcttcgcc accagcttcg gtcaccagca
     1081 attcgccttc gacctggcga aacaacaccc ggacgtggac ttcgagcacg ccggcggctg
     1141 gatgcaggcc gccaacttcg gcaatttctt cggcgcaacc caggctgcct ggtttccgat
     1201 gggagtcgcc gccggtaaaa tgaccaagag caacacgctg ggtttcgtcg ccggcgtgcc
     1261 gatcggttac gtcatcggca acatcaatgc gttcgccctg ggggcgcgtt cggtcaaccc
     1321 gaaagccgag gtccgggtcg tggtcaccgg cggctggtct gacaaagcca aggaagcggc
     1381 ggcagccaac gctctgatcg accagggggc ggatgtcatt accatgcacg tcgattcacc
     1441 ggcgacggtg atccagacgg cggagcatcg gggcgtttat tccatcggtt tccagtcgat
     1501 cgccgcgaag gcgctcgcgc cgaaattctg ggtgaccggt ctggggttca cctggggacc
     1561 tttcatgacc gaaacggcaa aaagcgtaat ggccggaagc ttcaaacccg ccatggtgcg
     1621 tgagggtctg ggccagatga tggcgatcgc ttcgttcggt cccgcggttc ccgcaacaac
     1681 gcgagccctg gtcacagccg ccgcggagaa ggtggagaaa ggctacaatc cgtttaccgg
     1741 accgctgacc gacaacaccg gcgtggttcg catcaaagac ggagactcct ggggcggaga
     1801 caaaatgggc aatttcgatt ggtacgtcga aggcgttatc ggcaagccta aataacgtcg
     1861 cggacagtcc aatccggcac gtcttactcg gcgtgccggc tgcccttgcc ctgtatcgtt
     1921 gttgagtgga ccgccatgct cgaaatcaac attcccgaag tagtcgccga ggtcaccgcg
     1981 gcgttcatgc gctacgagcg cgctttgatc gccaacgacg tcgccgagct ggactccgtg
     2041 ttctgggaca gctcacacac gttgcggttt ggcatcaacg aaaaccttta cggccacgac
     2101 gagatcgcca gttttcgcag tggccgtccg gcgatggatt tgacccgcga tctgcggaac
     2161 acggtgatca cgacctatgg ccgcgatgtc ggaacggcga ataccgaatt tcagcgggtg
     2221 ggcggcaaaa tccccggccg gcagagccat gtctggctcc gcaccgacga cggctggcgc
     2281 atcgcggcgg cgcatgtgag cttgctgctt ccgtttggtc aggcgaccgt gccgtagcaa
     2341 cggcgatgaa cgactcttaa gaatgttggc ccggattctg cttggcattt tcggatcacc
     2401 ccgcaactga gtgagtcgtc tcatgtcaca gtctcccttc catctgggct ggttcgtgaa
     2461 tttcaccccc ggggactggg acagcgactt cgcggtgggc ggtgctccct gggatggcaa
     2521 attctatatc gacatggccc aggcgctgga gcgcgcgtgt tttgattaca ttatgctgga
     2581 agataccgtc atggtctccg aaagctatgg cggttcgacc gaggctgcgc tgcggcacgc
     2641 tctgtttgtg cccaagcatg atcccatgcc actcgccgct ttgctgggcg cggccacgaa
     2701 gcatctgggc gtggttgcga ccatgacgac cctcgcttac ccgccctttc tgcttgcgcg
     2761 cctgtgctcg accctcgatc acctgaccgg cggccgcttt ggttggaaca tcgtcacctc
     2821 aggcgaggac gctgccgcgc aaaactttgg cctggagaaa ctgccgccgc gcgaactccg
     2881 ctacgagatg gccgacgagt atgtcgacct tgtctgccgg ctgttcgaca gttgggatcc
     2941 cgatgccgtc gtcatggatc gcgagcgtgg gatttacgcc gaccacacca aggtgaggcc
     3001 aattcatttc gcaggcaaat acttcaaaag ccgcggtccg ctcaacacgg tgcgttcgcc
     3061 gcaaggccgt gtggcgtttg tgcaagccgg cggatcgccc agagggcgcg cttttgctgc
     3121 cagatgggcg gactcgatca tcgccacggc aaatggcatc gagggcatga aagcctaccg
     3181 tgacgacgtt agagcccatg ccgtgagctt cggtcgcaac ccggacgata tcaaagtgtt
     3241 gttcctgatc tacccgttcc tcggcgacac cgaggcggag gcgcgggcga aacaccaacg
     3301 cctggtcaac tcgccgaaat tcatcgaaat gaccttggcc ttcatttcgt cgatcaccga
     3361 catcgatttt tcgaaatttc cgctcgatga accactgccg cggctgacca ccaacggtga
     3421 gcaaggctcg ctcgacaagt tctgccagtg gggcacaaac aagacattgc ggactctcgc
     3481 cgccgagcgt ttcggcgccc ctgatgatat caatttgatc gggacacctc gccaggtcgc
     3541 agccacgatg ggcgaggtaa tgcaggacgt gggtggtgac ggatttctga tcagcacgcc
     3601 attccagcgc accagtcgcc gttacattac cgaaatcacc gaaggtctcg ttccggcctt
     3661 gcaagccctg ggcctgaccc gcacggctta ctcgaagccg accctgcgtg aaacgctgac
     3721 cgaattctga atgggcggag gctgcgtcat gccagacggc cttcctcggc tgcatggcag
     3781 gcaaccagag tttcgccgac ctcgagcaac tcaggccgct cgtagcggca acggtcatcg
     3841 gcgaaaggac agcgcggatg gaagccgcaa cccggcggcg gcctgatcgg atttggcacc
     3901 tcgccggcaa ccggctcgcg ctcgcggccc atcatgtcga ctcgcgggat cgtatccagc
     3961 agcaatcttg tgtaggggtg gcgcggtgtc gcgaacaggc ggtccgcggc ggcaacctca
     4021 accaggcgtc ccaggtacat cacgccgacg cggtccgcca tctgatagac gaccgcgagg
     4081 ttgtgcgaga tgaacaaata g
//
LOCUS       DATAVD010000008         2481 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_372842, whole genome shotgun sequence.
ACCESSION   DATAVD010000008 DATAVD010000000
VERSION     DATAVD010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2481
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372842"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1443
                     /locus_tag="VHX39_00145"
     CDS             <1..1443
                     /locus_tag="VHX39_00145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX3989556.1"
                     /translation="AGAPPVETHISYLFLGHDTVWKLKKAVHLPFVDFTRLDDRHRFC
                     QRELALNASAAPGLYRDVVPIVRQSDGSLTVDGAGEVLDWVVRMARVPAGDFLDVKAA
                     ASGLPPALLDQIADAVAAWHLSLPPVLGLRPDMAAIARGNVDSAVAAGLVQAEVLAWR
                     DTMLAGLRARAAWSDARAAAGFVRRCHGDLHLGNLCLWQGRPVLFDALEFDEALATID
                     VAYDLAFLLMDLEHSLDRPAANRVLNRYVARTGDAALVGGLPVFLSMRAMIRAHVEAS
                     SGHSDRIAGYLAAAARYLQPHPPLVIAIGGLPGSGKSTLARTIAPGLGLAPGALVLRS
                     DEIRKRQHGAEPEQRLPQSAYTEARSTAVFEELARLVATAAKAGHAVIADATFMDLAH
                     RSLVETAAKQAGVAFLGIWLTAPLAELEQRIAARAGDASDATVEVLRAAVHADPGSGD
                     WHAVDAINQAAAVNEVLTLANCLLRSHIAF"
     gene            1524..2390
                     /locus_tag="VHX39_00150"
     CDS             1524..2390
                     /locus_tag="VHX39_00150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX3989557.1"
                     /translation="MAIRKILLPLTGTAAGEAALTASLMIANQWKAHVTALHVRVDSR
                     DVAPLAGEGLSGAMIEEMMTATEKESSDRAHAVRSMFERFVARQNVVVREAHPGLDHA
                     TASFAAVTGREEDIVAQQARLADLTVVPHPDAGEDVSSSDALHAVLFDSGRPVMIAPQ
                     THVETIGRRVCLAWNGTAESAESALSAMPWMRHAEGVRILSADGYQRRGPAAPELAAY
                     LALHGINADIVMFPSIRNSVGAGLMEAARQFGCDLLSMGAYSHSRLRQLILGGVTRHV
                     LENANIPVMMTR"
BASE COUNT          413 a          753 c          837 g          478 t
ORIGIN      
        1 gccggcgcgc caccggtcga gacacatatt tcctacctct ttctgggcca cgacaccgtc
       61 tggaagttga agaaagcggt ccatctgccg ttcgtggact tcacccggct ggatgaccgg
      121 caccggttct gccagcggga gctggcgttg aatgcatctg cggcacctgg tctgtatcgc
      181 gacgtcgtcc ccatcgttcg ccagtccgac gggtctctga cggtcgatgg cgccggcgag
      241 gtgctcgact gggtcgtccg aatggcccgc gtgccggccg gcgacttcct ggacgtcaag
      301 gccgccgcca gcggtctgcc gcctgccttg ctggaccaga tcgccgacgc cgtcgccgcg
      361 tggcatctgt ccttgccgcc ggttctcggc ctccgcccgg atatggcggc gatcgcccgc
      421 ggcaatgtgg actcggcagt tgcggcgggt ttggttcagg cggaggtgct cgcctggcgc
      481 gatacgatgc tggctggttt gcgcgcccgt gccgcgtgga gcgatgccag ggcagcggcc
      541 gggttcgtgc gtcgctgtca cggcgatctg catctcggca atctgtgtct ctggcaaggc
      601 aggcctgtgc tgttcgatgc attggaattc gatgaggccc tggcgaccat cgatgttgcc
      661 tacgatctcg cgtttctatt gatggacctg gagcacagcc ttgaccggcc agccgccaat
      721 cgggtgctga accgctatgt ggcacgcacc ggagacgctg ctctggtcgg cgggttaccg
      781 gtctttctct caatgcgtgc gatgatccgt gcccatgtcg aggcaagctc aggtcattcc
      841 gatcgtattg ccggatattt ggcggccgcg gcgcggtatt tgcagccgca tccgccgctg
      901 gtaatcgcga tcggcggcct gccaggcagc ggcaagtcga ccctggcccg gacaattgcg
      961 ccgggattgg gtttggcacc gggcgcgctg gtgttgcgca gcgacgaaat ccgcaagcgc
     1021 cagcatggcg ccgaacccga gcaacgcctg ccgcaatccg cctataccga agcccgcagc
     1081 acggcggtgt tcgaggaact tgcgcgtttg gtggcgacgg cggccaaagc cggtcacgcg
     1141 gtgatcgccg atgccacgtt catggacctg gcgcatcggt cgctggtcga gacggcagcg
     1201 aaacaggctg gtgtggcgtt cctcggcatc tggctgaccg caccgctggc tgaacttgaa
     1261 cagcgcattg cagcgcgcgc cggcgatgcg tccgacgcca cggtcgaggt gctccgcgcc
     1321 gcggtacacg ctgacccagg ttcgggggat tggcacgcag tcgatgcaat caaccaggct
     1381 gcggcggtta acgaagtgtt aaccctggcg aactgtctgc tacgatccca tattgcgttc
     1441 tgatgtgaac gcaatgcaga gttgcaccca actcgggacg aaatcgctcc gggttgggaa
     1501 acggccaggg aaaggaccag acaatggcca tccgtaaaat tttgctgcca ttaaccggca
     1561 ccgccgccgg cgaggccgct ctgaccgcgt cgttgatgat tgcaaatcaa tggaaagccc
     1621 acgtcaccgc gttgcatgta cgagtcgaca gccgcgatgt ggcaccgctg gcgggtgaag
     1681 gcctgtccgg cgcgatgatt gaggaaatga tgacggcaac ggaaaaggaa agcagcgacc
     1741 gcgcccatgc cgtgcgctcg atgttcgaac gtttcgttgc ccggcaaaac gtcgtggtgc
     1801 gcgaggcgca tcccggactg gaccacgcca ccgccagttt cgctgccgtt accggacgcg
     1861 aggaagacat tgtcgcgcag caggcccggc tcgccgatct gacggtcgtg ccgcatcctg
     1921 atgcgggcga ggacgtatcc tcatccgatg cactgcacgc tgtgctgttc gattcgggcc
     1981 ggccggtgat gatcgcgcca caaacgcatg tcgaaacgat tggccggcgc gtgtgtctgg
     2041 cgtggaatgg gacggcggag tcggcggaat cggcactctc ggcgatgccc tggatgaggc
     2101 atgcggaggg agtgcgcatt ctgtcggccg atggctatca acgccgtggg cctgctgcgc
     2161 cggaactggc cgcctatttg gcgctgcacg ggatcaatgc ggacatcgta atgttcccgt
     2221 cgatccgcaa ttccgtcggc gccggtttga tggaggcagc gcgtcagttt ggctgcgacc
     2281 tgctgtcgat gggcgcttac tcgcactcaa gattgcggca gctgattttg ggtggggtga
     2341 cgcggcatgt actggagaac gcgaacattc cggtgatgat gacgcggtag cccagaggtc
     2401 tcatggtgtt gaggtcgtca tggcccggct cgtccgggcc acccgaagcg ccacaatgcc
     2461 agtgacagat taggtggccc g
//
LOCUS       DATAVD010000009         2944 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2978546, whole genome shotgun sequence.
ACCESSION   DATAVD010000009 DATAVD010000000
VERSION     DATAVD010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2944)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2944)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2944
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2978546"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..418
                     /gene="purH"
                     /locus_tag="VHX39_00155"
     CDS             <1..418
                     /gene="purH"
                     /locus_tag="VHX39_00155"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391402.1"
                     /note="involved in de novo purine biosynthesis; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEX3989558.1"
                     /translation="ADLKVVTKRAPTDAELVDLLFAFIVCKHVKSNAIVYAKDGATVG
                     IGSGQPNRVDSARIAAWKAEEAAKAAGLPHRLTEGSVVASDAFFPFADGLEAAAAAGA
                     TAVIQPGGSVRDAEVIAAADAAELAMVFTGMRHFRH"
     gene            436..879
                     /locus_tag="VHX39_00160"
     CDS             436..879
                     /locus_tag="VHX39_00160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989559.1"
                     /translation="MSSVANRSGPPLARAAYLIAAAATAMMGFLAVSGKFTGVMVEIA
                     NLPPELYVSPFPFEILTAINVLQSVYLAVLLGVFVFLAFRPFWWGKLICLGMGLTWVV
                     GGAGFAMIAGFYPIIECQIWAGVALLLAALMHQIADPRFDAAGRK"
     gene            complement(889..1617)
                     /locus_tag="VHX39_00165"
     CDS             complement(889..1617)
                     /locus_tag="VHX39_00165"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF017522.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TylF/MycF/NovP-related O-methyltransferase"
                     /protein_id="HEX3989560.1"
                     /translation="MLILETAKGDLEYPDISDAFFIEAAAKVQPHTRTFGAGAEAPWA
                     LYQSIEYIVRNGIPGDIVECGVWSGGSILLAALALMHFGDTSRRIWLYDTFSGNPRPE
                     PIDARWDGVPALPTWEHHQRNGGRWCFGGTQDHVRRVVTSSGYPEDQFVFVEGLVEDT
                     LPAQRPEAVSLLRLDTDLHRSTLHELVHLYPLLTVGGILMIDDYGAFQGARLATDQYI
                     EANQLKLFLSRIDVSVRLAVKPGA"
     gene            1896..2921
                     /locus_tag="VHX39_00170"
     CDS             1896..2921
                     /locus_tag="VHX39_00170"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3989561.1"
                     /translation="MIFRQLFEPVSGTYSYLMASRPGGEALIIDPVLEKVDRYLQLTR
                     ELDLRLVKAVDTHLHADHITGLGALRDRTHCITVMGEQSQVDVVSMRIAEGDKLTIEG
                     ISLDVLYTPGHTDDSYSFRMADRVFTGDTLLIRGTGRTDFQNGDPRAQYDSLFNKLLK
                     LPDDTLVFPAHDYKGDTVSTIGEEKRYNPRLQVGSADEYATLMNNLNLSNPKMMDVAV
                     PANMRQGLVQAEIARRGWAVCAADAKALIGRSDIVLVDLRERAERERHGTIPGALHAP
                     YPALQENIAQGGMLHELVTATGKQLLFYCAFGERSAMAVQAAQDAGLARARHIEGGMD
                     AWKKLAG"
BASE COUNT          573 a          860 c          939 g          572 t
ORIGIN      
        1 tgctgatctc aaggtcgtaa cgaaacgcgc gccgaccgat gcagaactgg tcgatctgct
       61 gtttgcgttc atcgtgtgca agcacgtgaa gtcgaatgcc atcgtctatg ccaaggatgg
      121 tgccacggtc ggcattggtt cgggccagcc gaaccgggtc gattccgcgc gcatcgctgc
      181 gtggaaggcg gaggaggcgg caaaggccgc cggtttgcca catcgcctga ccgaaggcag
      241 cgtcgttgcc tcggacgcgt tctttccgtt tgcggatggc ttggaggcgg ccgccgcagc
      301 gggtgccacc gcggtcattc aacccggtgg gtcggtccgt gacgcggaag tcatcgcggc
      361 tgcggacgct gcggaactcg ccatggtgtt taccggaatg cgacattttc ggcactgaac
      421 gcgaggagtg cccatgtgtc cagcgtagca aaccggtctg gaccgccgct ggcgcgcgcc
      481 gcgtacctga tcgctgccgc cgcaaccgca atgatgggct ttcttgcggt gtccgggaaa
      541 ttcaccggtg tgatggtcga gatcgccaat ctgccgcccg agctttacgt ttcgcctttt
      601 ccgtttgaaa tcctgacagc catcaacgtc ctgcaaagcg tatacctcgc ggttctcctc
      661 ggtgtgttcg tatttctggc attccgtccc ttctggtggg gcaagctgat ttgtttgggc
      721 atgggcctga cctgggtcgt cggaggcgca ggattcgcga tgattgctgg tttctatccg
      781 atcattgaat gccagatctg ggcgggggtc gcactgttgc tggccgcgct gatgcaccaa
      841 attgccgatc cacgatttga cgctgccggt cgtaagtgac cggcagcgtc acgcacctgg
      901 cttgacggcg agccggaccg acacgtcgat gcgcgataaa aacagcttca actggtttgc
      961 ctcgatgtac tgatcggtcg ccagcctcgc cccctggaac gcgccataat cgtcgatcat
     1021 cagaatgccg cccaccgtca gaagcggata caaatgcacc agttcgtgca aggtcgaacg
     1081 atgcagatcg gtatctaaac gcagcaggct gaccgcttcg ggcctttgcg cgggcagcgt
     1141 gtcctccacc aaaccttcga cgaacacgaa ttggtcctcg gggtaacccg atgaggtcac
     1201 cacgcgtctg acgtgatcct gcgtcccgcc aaaacaccag cggccgccgt tgcgctggtg
     1261 atgctcccag gtcggcagag cgggaacgcc atcccatctt gcatcgatcg gctccggtct
     1321 gggattgccg gagaacgtgt catacagcca gatccggcgt gaggtatcgc caaagtgcat
     1381 caacgccagc gcggcgagca agatcgagcc accggaccag acgccgcatt ccacaatgtc
     1441 accgggaatg ccgttgcgca cgatgtattc gatggattgg tataaagccc agggagcctc
     1501 ggcgccggcg ccgaaggtgc gggtgtgggg ctgcactttg gcggccgcct cgatgaagaa
     1561 cgcgtccgaa atgtcgggat attccagatc tcctttggcg gtttccagga tcagcatgac
     1621 ggtctccggc gctgttggcg gctgcgaccg tagcgtagcg tggcgaagtt aaagattggt
     1681 gatgaacgtg agctcgtcca aaggcgagct gcgcacgaaa tccgggcatg gtgatcggcg
     1741 ccgtcccccg gacgcagacg ggataatcat tgcggatctt cggaaagcgg ggtaatttca
     1801 tccacccaga gccgggaaaa cagaagatcg ttgccgagag ccggcaaagg catccggtca
     1861 gcgccgtccg tcccaacccc taaggagatg gctccatgat cttccgccag ttgttcgaac
     1921 cggtttccgg cacctacagc tatctcatgg ccagccggcc cggcggcgaa gcgctgatca
     1981 tcgatccggt gctggagaag gtagaccgtt atctgcaact cacccgcgag cttgatctgc
     2041 ggctggtcaa ggcggtcgat acccatctgc atgccgacca catcaccggc ctcggcgcat
     2101 tacgtgaccg cacgcactgc atcaccgtca tgggggaaca gagccaggtc gacgttgtct
     2161 ccatgcgcat cgccgagggc gacaaactga ccattgaagg catcagtctg gacgtgctct
     2221 atacgcccgg ccacaccgac gattcctata gttttcgtat ggccgatcgg gtgttcaccg
     2281 gcgacacgct gctgatccga ggcaccggac ggaccgactt ccagaacggc gatccgcggg
     2341 cacaatacga cagcctgttc aacaagctgc tgaaactgcc ggacgacact ttggtgttcc
     2401 cggcgcatga ttacaaaggc gatacggtca gcacgatcgg cgaagagaaa cgctacaatc
     2461 cgcgtctgca ggttggctcg gctgacgaat atgcgacatt gatgaacaac ctgaacctgt
     2521 ccaatccgaa aatgatggac gtggcggtgc cggcgaacat gcgccagggc ctggtgcagg
     2581 cggagattgc tcgccgaggt tgggcggtct gtgcggccga tgcgaaggcg ctgatcggac
     2641 gttccgacat cgtgctggtc gatctgcgcg aacgggcgga acgggaacgg catggcacga
     2701 tccccggagc gctgcacgcg ccgtatcccg cattgcagga gaatatcgcc cagggtggga
     2761 tgctgcacga actggtgacg gcgacgggaa agcagttgct gttctattgt gcgtttggcg
     2821 agcgttctgc gatggccgtg caggcggcac aggatgccgg cctggcacgg gcgcggcata
     2881 tcgagggcgg catggacgcg tggaagaaac ttgcggggtg acgccgggtt tgtcggtcca
     2941 ggga
//
LOCUS       DATAVD010000010         2813 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3165437, whole genome shotgun sequence.
ACCESSION   DATAVD010000010 DATAVD010000000
VERSION     DATAVD010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2813
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3165437"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..357
                     /locus_tag="VHX39_00175"
     CDS             <1..357
                     /locus_tag="VHX39_00175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019089873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3989562.1"
                     /translation="SNDIARSKKFYDALFGAIGGKPGTEDAKGRLIYANNGGLLLVSK
                     PIDGKPATPANGGTIGFAVTGPEQANAWHKAGVENGGTAIEDPPGVREGGMRLYLAYL
                     RDPDGNKLCALHRMPA"
     gene            complement(681..1505)
                     /locus_tag="VHX39_00180"
     CDS             complement(681..1505)
                     /locus_tag="VHX39_00180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010510726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3989563.1"
                     /translation="MPTITTKDGTEIFYKDWGSGQPVVFSHGWPLSSDDWDAQMLFFQ
                     RHGFRVVAHDRRGHGRSAQVGDGHDMDHYADDLAALTAHLDLRNAVHVGHSTGGGEVV
                     HYVARHGASRVAKAAIISAVPPLMVKTEANPGGLSKDVFDGLQAQLAASRAQFYYDVP
                     AGPFYGYNRPGATPSQGIIWNWWRQGMMGGAKAHYDGIVAFSQTDFTEDLKKITVPVL
                     VMHGDDDQIVPYADSAPLSAKLLKNGTLKTYQGFPHGMPTTEADTINADLLAFIRG"
     gene            complement(1606..>2813)
                     /locus_tag="VHX39_00185"
     CDS             complement(1606..>2813)
                     /locus_tag="VHX39_00185"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3989564.1"
                     /translation="PSLDPGAGRMGNPSEPLSRNRRNAMPTVHPQVQKARDLMPLIAA
                     ASAENDEIRELTKPVVRALIDGGFFTMLKTKSVGGMELKPSIFAQVTEAIASADGSTG
                     WVTCQSNGCSTTSAYLAPHIAQEIFGRPDGIVAWGPPGSPYEATPVDGGYRITGKWRF
                     MSGSQNATWLGAHLRVAGTKETKTFLYPKSSATFHDIWHTLGLRGTASNEYSVDNLFI
                     PHERAIYRDDPRDRRTDSPLYRFSSNQLYSIGFGGVALGIARGTMDAFLTLPREKTRR
                     GAGKPMIENNVVQSHVAQSEARWRSARYFLHAAADEALETIEERGAMDADQRTRLRLA
                     STWAIQSSREIVNTLYHDCGSMAVFEENPFERRLRDIHTVAQQGQGRILHYETVGQLL
                     LGMPPENIF"
BASE COUNT          483 a          857 c          939 g          534 t
ORIGIN      
        1 agcaacgata tcgcccggtc gaagaaattc tacgacgccc tgtttggcgc gatcggcggc
       61 aaacctggga cggaggacgc caagggccgg ctgatttacg cgaataacgg cggcctgctc
      121 ctggtgagca agccgatcga cggcaaaccg gccacgcccg ccaacggcgg cacgatcggc
      181 tttgcggtga caggcccgga acaggccaac gcctggcaca aagccggggt ggagaacggc
      241 ggcacggcga tcgaggaccc gccgggcgtt cgcgagggcg gcatgcggct gtatctggct
      301 tacctgcgcg atcccgacgg caacaagctg tgcgcgctgc atcgcatgcc ggcctgaacg
      361 gtcgcggatg acagcgcaaa gggccgccca taccggcggc ccttggtgat cgcgccgcgg
      421 ctggacgccc cgttggcgtt ccgcccaggg cgatcatgct ttaagcaaag cactgtttgc
      481 cagtgtggtt tttggttccg aagtccgctc cggcggctga tccacggtgt ggcgggcttc
      541 ggaaccaccg tgcttaagca gacattcgag cattggccaa cggacgagat cgagcttcaa
      601 gttttatacg ctgaagatgc ttgcatggcc cgtcccgaat acgttggtca agccgccggg
      661 gtcaagccgc cggaacctgc ttagcctctg atgaaagcca ggaggtcggc attgatggtg
      721 tcggcttcgg tggtcggcat gccgtgcgga aagccctgat aggttttcag ggtgccgttc
      781 ttcagcagct ttgccgacag cggtgccgag tcggcatagg gtacgatctg gtcgtcgtcg
      841 ccgtgcatca ccaggaccgg caccgtgatc ttcttcaggt cctcggtgaa gtcggtctgg
      901 gaaaaggcga cgatgccgtc ataatgagcc ttggcgccgc ccatcatgcc ctggcgccac
      961 cagttccaga tgataccctg cgacggtgtc gcaccggggc ggttgtagcc atagaacggt
     1021 ccggccggca catcgtaata gaattgcgcg cgactggcgg cgagttgtgc ctgaaggccg
     1081 tcgaacacgt ccttggacag cccgcccgga ttggcttccg tcttcaccat gagcggaggc
     1141 acggcgctga tgatcgccgc ttttgcaaca cggcttgcgc catgccgggc aacgtagtgc
     1201 acgacttcgc cgccgccggt ggaatggccg acgtgtaccg cgttccggag gtccagatgt
     1261 gcggtcagcg ccgcaaggtc gtcagcgtaa tgatccatgt cgtggccgtc cccgacctgg
     1321 gccgagcgac cgtggccgcg ccggtcatgc gcgacgacgc ggaagccgtg acgctggaag
     1381 aaaagcatct gtgcatccca gtcatcggac gaaagcggcc agccatgact gaagacaaca
     1441 ggctgccctg aaccccaatc cttgtagaag atctcggtgc catccttcgt ggtgatcgtt
     1501 ggcatgacgt caatcccatg gctgtttcac tgcggagcgt cggtcccctg aaagcatagg
     1561 gcttgtcgcc ggtgatgtgg attgacgaaa ccgccatttc ctttgtcaga agatgttctc
     1621 gggcggcatg cccagcagaa gctggccaac cgtctcgtag tgcaggatcc gtccctggcc
     1681 ttgttgcgcg accgtgtgga tatcgcgcag gcggcgttcg aacgggtttt cctcgaaaac
     1741 cgccatcgag ccgcagtcgt ggtacagcgt gttgacgatc tcacgtgacg actggatggc
     1801 ccaggtggac gcaagccgca ggcgggtgcg ctgatccgca tccatggcgc cgcgttcctc
     1861 gatcgtttcc agcgcctcgt ccgccgcggc gtgcaggaag taccgggcgg agcgccaccg
     1921 agcctcggat tgtgccacgt gcgactggac gacgttgttt tcgatcattg gcttgccggc
     1981 gccgcggcgg gtcttttccc ggggcagggt caggaacgcg tccattgttc cccgagcgat
     2041 accaagtgcg acaccgccga agccgatgga atagagttgg ttgctgctga aacgatacag
     2101 cgggctgtcg gtccggcggt cgcgcggatc gtcgcggtag atggcgcgct cgtgcggaat
     2161 gaacaggttg tcgacggaat attcattgct ggcggtgccg cgcaggccca gcgtgtgcca
     2221 gatgtcgtgg aacgtggcgc tcgatttggg atacaggaag gtcttcgttt ccttcgtgcc
     2281 cgcgacccgc agatgcgcgc ccagccaggt ggcgttctgg ctgccgctca tgaagcgcca
     2341 tttgccggtg atgcgatacc cgccgtcgac cggcgtggcc tcgtacggcg aaccgggcgg
     2401 tccccaggcc acgatcccat ccggccgccc gaaaatctcc tgggcgatgt gcggggcgag
     2461 gtaggcgctg gtggtcgagc agccgttgct ctggcacgtc acccacccgg tcgagccatc
     2521 cgcgctggcg atcgcctcgg tcacctgggc gaagatcgag ggtttcagtt ccatcccgcc
     2581 cacggatttc gtcttcagca tggtgaagaa cccgccatcg atcagggccc tgacgacggg
     2641 tttggtgagt tcccggatct cgtcgttctc cgccgaggca gcggcgatca ggggcatgag
     2701 atcgcgggct ttctggacct gcggatggac ggtgggcatg gcgtttctcc ggttccgcga
     2761 cagcggttcg gatggattac ccatccgccc ggcgcccggg tcaagcgacg gcc
//
LOCUS       DATAVD010000011         3405 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2234949, whole genome shotgun sequence.
ACCESSION   DATAVD010000011 DATAVD010000000
VERSION     DATAVD010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3405
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2234949"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..904
                     /locus_tag="VHX39_00190"
     CDS             <1..904
                     /locus_tag="VHX39_00190"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEX3989565.1"
                     /translation="PHFPYRMKTVFQCLAERGQSWKVFFHDVPQSATLAGLWTSAATH
                     FREFESEFARDAAAGTLPAYSFIEPRYFADPVLNRLPNDEHPPHNVAYGEELIATVYN
                     AVRSGPGWRQTMFVVTYDEHGGCYDHVAPPAAISPDDLRSDGFDFATYGVRVPAVIVS
                     PHVRPGSVIRPPGNRRFDHTSIIATLRQLFAIGPLTKRDAAAPGLLDALDERVTNDGP
                     ASITAPAVPPAPAQVARASGKPLNDLQRSLSTAAVQLPTFGADIAVHIQRLAASVDVT
                     PQHATVADAAADILAHVKAFLGQI"
     gene            complement(994..2388)
                     /locus_tag="VHX39_00195"
     CDS             complement(994..2388)
                     /locus_tag="VHX39_00195"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3989566.1"
                     /translation="MSATLVVTPAAEITARLDRLPMTRHIWILVLLISLGGWFDTYAI
                     FLTGTIAPGLFADKIFTPTTVAFFGFTGLASFIAALFTGLFIGTMFLTRFADRFGRRT
                     VFTYSLIWYSVCSTVMAFQSTANDVNLWRMLAGIGIGIELVTVDTYLSELVPKRERGR
                     TFAIQHSIGFVAVPAVTLLAWIFVPTAPFGLSGWRWVVLFDAVGAILVWWARFGLPES
                     PRWLAQQGRLAEAETVMRAIEAMVTAESGSPLPQPGPPVVEDPRVGRLAEAFGAQYRK
                     RTIMLSVANFFQTIGFYGFANWVPTLLIAKGIHVSQTLQYTFIIAFAYPLFPLISAKL
                     ADKIERKWQVCLSCAGIALFGILFSTQSEALPLIIIGAFQTMMNSWLSFSAHNYQSEL
                     FPTRMRASAVGFVYSWSRLSAIFTGFVIAWLLAQFGVMAVFLFVAGAMGAVIVAVAGF
                     GPSTNNLALEEISH"
     gene            2810..>3405
                     /locus_tag="VHX39_00200"
     CDS             2810..>3405
                     /locus_tag="VHX39_00200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacetone oxidase family FAD-binding enzyme"
                     /protein_id="HEX3989567.1"
                     /translation="MPHFDVIILGAGAAGLMCAITAGQRGRRVLLLDHAAEPGAKILI
                     SGGGRCNFTNTATAPERFLSNNRHFARSALDRYTPDHFIALVQRHGIAFHEKAKGQLF
                     CDGSARAIVAMLLAEVHAAGVDLRLAHRITGLSKAESFRIDTNHGTFTAASLVLATGG
                     LSIPKLGATGFAYDAARHFGLRITQTRPGLVPLTFGNDL"
BASE COUNT          671 a         1033 c         1078 g          623 t
ORIGIN      
        1 gccgcatttt ccttacagga tgaaaacggt attccagtgt ttggcagaga gagggcaaag
       61 ctggaaggtc ttcttccacg atgtgccgca atcggcgact ctggccggtc tctggacgtc
      121 ggcggcgact catttccgcg aattcgaaag tgagtttgcg cgggacgccg ctgccgggac
      181 actgcccgcc tatagcttca tcgaaccgcg ctatttcgcc gacccggtgc ttaaccggct
      241 gccgaacgac gagcatccgc cgcacaacgt tgcgtacggc gaggaactga tcgccacggt
      301 ctacaatgcg gtgcgcagcg gccccggatg gaggcagacg atgtttgtgg tgacgtatga
      361 tgagcacggc ggttgttatg atcacgttgc gccaccggcg gcgatctcgc cggatgacct
      421 ccggtccgat ggcttcgatt ttgcaacgta tggcgttcgg gtgcccgcgg tgatcgtttc
      481 accccatgtg cgacccggca gcgtgatccg tccgccaggg aataggcggt tcgaccatac
      541 ctcgatcatt gcaacgttac ggcagttgtt cgcgatcggg ccgttgacga aacgagatgc
      601 cgcggcgccc ggtttgctgg atgcgctgga cgaacgggtc acaaacgatg ggccggcgtc
      661 gatcactgcc ccggcggtgc cgccggcgcc ggctcaggtc gcgcgtgcca gcggcaaacc
      721 ccttaacgat ttgcaacgca gcctgagcac ggctgcggtg caactgccga ccttcggggc
      781 ggatatcgca gtgcatattc aacgtttggc cgcttccgtg gacgtcactc cacaacatgc
      841 caccgtcgcc gacgcggcag ccgatatcct ggcgcacgtg aaggcgtttc tgggccaaat
      901 atgaacgacg tctgcagccg atcgcggcat tgctggttac cggcaagggg acacgcaacg
      961 tgtttgtctt gccgccggcc tatcgttacg gtatcagtgc gaaatttcct ccaaggcgag
     1021 gttgttggtt gacggaccga agccggccac tgccacaatc accgcgccca tcgcgccggc
     1081 gacaaagagg aacacggcca tcaccccaaa ctgagccagc aaccacgcga taacgaagcc
     1141 ggtgaagatc gcgctgaggc ggctccagga atacacaaag ccgacggcgc tggcgcgcat
     1201 gcgggttggg aacagctcgg actgatagtt gtgcgccgag aacgacagcc aggagttcat
     1261 catggtctgg aaggcgccga tgatgatcag cggcaacgcc tcggattgcg tcgagaacag
     1321 gatgccgaac agagcgatgc cggcgcagga caggcagacc tgccatttgc gctcgatctt
     1381 gtcggcgagt ttggcgctga tcagtggaaa caatggatac gcgaaggcaa tgatgaaggt
     1441 gtattgcagc gtttgcgaca cgtggatgcc tttggcgatc agcagtgtgg gcacccaatt
     1501 ggcaaaaccg taaaagccga tggtctggaa gaaattcgcc accgacagca tgatggtgcg
     1561 cttgcggtat tgcgcgccga acgcctcggc cagccggccg acgcgggggt cttcgacgac
     1621 aggcggccca ggttggggca atggcgagcc tgactcggcg gtgaccatgg cttcgatcgc
     1681 tcgcatgacc gtttcggctt cggcaagacg gccttgctgg gccagccagc gcggcgactc
     1741 gggcaggcca aagcgcgccc accagaccag gatggcgccg acggcgtcga acagcacaac
     1801 ccagcgccag ccggacaggc cgaagggcgc agtgggcacg aagatccagg cgagcagggt
     1861 taccgccggt acggcaacga aaccgatcga gtgttggatg gcgaacgtgc ggcctcgttc
     1921 gcgttttggc accagttcgg agaggtaggt gtcgacagtg acaagctcga tgccgatgcc
     1981 gatgccggcg agcatgcgcc acagattcac gtcgttggca gtcgactgga aggccattac
     2041 ggtcgagcaa acactgtacc agatcagcga ataggtgaac accgtacgcc ggccgaaacg
     2101 atcggcaaag cgggtgagga acatggtgcc gatgaacaac ccggtgaaca gcgccgcgat
     2161 gaacgaggca aggccggtga aaccgaagaa cgcgacggtg gtgggggtga agattttatc
     2221 agcgaacagg ccgggagcga tggtcccggt gaggaagatt gcataggtgt cgaaccagcc
     2281 gcccagtgaa atgagcagga cgaggatcca gatgtggcga gtcatgggga ggcggtccag
     2341 ccgggcggta atctccgccg ctggtgttac aaccagggtc gcactcatga attgatcggc
     2401 tcccgtgacg cggctttgcg cgttactgtt tcctcgttag tgggccgcgt caggcacggc
     2461 tggcgtttgg cctgacggag tgtcggggaa aacggcaggg agtgcaaatt cctggccgag
     2521 tgcccgtttg ggaaaccagg ccggtcggta atgattaagc gtccctctcg ggaggcgata
     2581 ccgggccgga taccgcaatc tggtgcttat ggatttctca ccccggggat gtttcgtgaa
     2641 gctacccgtt cgttggctgg acgcccgttc ggctcatggg tcgaaacgtg tgttgcgtga
     2701 ccagctttcc gatccgccgg tcgacacctg acgttctggc ttaggctgcg gcacttctcg
     2761 tatgacttct tctctctttc ctcgctcttt ccgctatacc aacctccgca tgccccactt
     2821 cgacgtcatc atcctgggcg ccggcgccgc tggcctgatg tgcgccatca ccgccggcca
     2881 acggggccgc cgcgtgcttt tgctcgacca cgccgcagag ccaggcgcca aaatcctcat
     2941 ctccggcggt ggtcgttgca acttcaccaa caccgccacc gcgcccgagc gtttcctgtc
     3001 gaataaccgc cacttcgctc gatccgcctt ggaccgttac acgcctgacc acttcattgc
     3061 cctggtgcaa cgccatggca tcgccttcca cgagaaagcc aaaggccaat tgttctgcga
     3121 cgggtccgcc cgcgccatcg tcgccatgct gctggcggaa gtgcatgccg ccggcgtcga
     3181 tctgcgcctg gcgcatcgaa tcaccggcct gagcaaagcc gaatcattcc gtatcgacac
     3241 aaaccacggc acattcaccg cggcgagcct ggtcctcgcc accggcgggt tatcgatccc
     3301 caaactcggc gccaccgggt ttgcttacga cgcggcgcgg cacttcggcc tgcggataac
     3361 gcagacacga ccaggcctcg tcccactgac cttcggcaac gacct
//
LOCUS       DATAVD010000012         2682 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2979169, whole genome shotgun sequence.
ACCESSION   DATAVD010000012 DATAVD010000000
VERSION     DATAVD010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2682
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2979169"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            168..1049
                     /locus_tag="VHX39_00205"
     CDS             168..1049
                     /locus_tag="VHX39_00205"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HEX3989568.1"
                     /translation="MTQTGKLRELLRAPGMVIAPGAYDGLTAMLVAQAGFPVVYMTGA
                     GTSVSHGYPDFGLLTETEMVANAARMARAVEIPVIADADTGYGNELNVVRTVRDYERA
                     GVAGIHIEDQVSPKRCGHLDDKEIVPREDWVAKIRAAAASRSDPDFLIIARTDSRAVA
                     GFEEAIARANGAIEAGADMAFVEAPQTMEEITAVPKRVKGPCLLNVVWGGKTPQIDLR
                     EAEALGFKLAIVPGLLLKAAIGACDAALAALKETHIHPAPREGMTVRAAFDRVGATEW
                     DSFRTRFRAPETRRAAE"
     gene            1085..2044
                     /locus_tag="VHX39_00210"
     CDS             1085..2044
                     /locus_tag="VHX39_00210"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-alpha-hydroxyglycine alpha-amidating
                     lyase family protein"
                     /protein_id="HEX3989569.1"
                     /translation="MVTLGSGDYTYEPVEDWAKLPPGWSFKEIGGVGVDSKDNVYVFN
                     RGEHPMIVFDRDGNFLRSWGEGGMFPRAHGIFVAPDETLWLTDDGDHTVRQCTVEGKV
                     LLTLGSSGKPAPYMSGEPFHRCTHTAMAPNGDLYISDGYGNSRVHKYSPNGKLIMSWG
                     GPGTDPGEFNIVHNITCDADGWVYVADRENHRVQVFDGNGKYETQWNNLFRPCGLFMP
                     PGKCPICYIGELGPVQPVNRDMPNLGPRVTIVDNTGKRLARLGGLHAGLGPDQFMAPH
                     GLTVDRHGDIYVGEVSWTTWPQCFPDKPRPANLRSLQKFRRVK"
     gene            2102..>2682
                     /locus_tag="VHX39_00215"
     CDS             2102..>2682
                     /locus_tag="VHX39_00215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase"
                     /protein_id="HEX3989570.1"
                     /translation="MTIPNVAALPEDAAIATLVGRVWRPDRNGPSVVAIRDGAVFDIS
                     ATSPTVRDLCECSDPADRVRSRQGENLGRVADLLANTPPQTRDRGKPWLLAPIDLQAI
                     KAAGVTFAISMLERVIEERARGDMSAAVAIRAEVTNLVGDDLAKLKPGSPGAARLKQV
                     LIEQNAWSQYLEVGIGPDAEIFTKAQPMAAVGT"
BASE COUNT          542 a          828 c          827 g          485 t
ORIGIN      
        1 cggttttgac gataccccag cttggagttc cgtcagggcg gcggaagctc agcagtttca
       61 tctcgttctc ctgtcgctga tcgatcaggt gataggcctg ggctggcatg gcggcaagct
      121 ggaccgcagg ccccggccag cctagcatcg ggcatggagg tgccaggatg acccagacag
      181 gaaaattgcg tgaattgctg cgcgcgccgg gcatggtgat cgcaccagga gcctatgacg
      241 gactgaccgc aatgctggtg gcacaggctg gatttccggt cgtatatatg accggggcgg
      301 gcacttccgt gtcgcatggc tatccggatt tcggcttgct tacagagacc gaaatggtcg
      361 ccaacgccgc tcgcatggcg cgtgcggtcg aaattccggt gattgccgat gccgataccg
      421 gatatggcaa cgaacttaac gtggtgcgca ccgtgcgcga ctatgaacgc gccggcgtcg
      481 caggcatcca tatcgaagat caggtctcgc ccaaacgctg cggtcatctc gatgataagg
      541 aaatcgtacc gcgtgaggac tgggtggcga aaatccgtgc cgctgccgcc agccgcagcg
      601 atcccgattt cttgatcatt gcccggaccg attcacgcgc cgtcgccggg ttcgaggaag
      661 ccatcgcccg cgccaacggg gcaatcgagg ccggtgccga tatggcgttc gtcgaggcgc
      721 cgcaaaccat ggaagaaatc accgcggttc cgaagcgggt gaaagggcca tgcctgctga
      781 acgtcgtctg gggtggcaaa acgccgcaga tcgatttgcg tgaggcagag gctctgggct
      841 tcaagctggc gatcgtgccc ggcctgctgc tgaaagccgc aattggcgcc tgcgatgcgg
      901 cgctggcggc attgaaggaa acccatatcc acccggcacc gcgcgagggc atgacggttc
      961 gcgccgcgtt cgatcgtgtc ggcgccacgg aatgggattc gttccgcacg aggtttcgtg
     1021 cacccgaaac caggcgcgcc gccgaataag gcctctgggc cgcgacgaaa cggaggaagc
     1081 catcatggtc acccttggca gtggtgatta cacttacgaa ccagtcgaag attgggccaa
     1141 attgccgccc ggctggtcgt tcaaggaaat cggcggcgtc ggcgtcgact cgaaagacaa
     1201 cgtctatgtc ttcaatcgtg gcgaacaccc gatgatcgtg ttcgatcgcg acggcaactt
     1261 tctccgctcg tggggcgaag gcggcatgtt ccccagggcg cacggcatct tcgtggcacc
     1321 cgacgaaaca ttgtggctga ccgatgacgg cgatcacacc gtccggcagt gcactgtgga
     1381 aggcaaggtg ctgttgacgt taggctcgtc aggaaagcct gcgccttaca tgagcggcga
     1441 accattccac cgctgcaccc ataccgcgat ggcaccgaac ggcgatcttt acatttccga
     1501 cggctacggc aattcccggg tgcacaaata ttcgcccaac ggcaaattga tcatgtcctg
     1561 gggcggaccc ggcaccgatc ccggcgagtt caacatcgtg cacaacatca cctgtgatgc
     1621 cgacggctgg gtctatgtcg ccgaccggga aaaccatcgt gtccaggtgt tcgacggcaa
     1681 tggcaaatac gaaacccaat ggaacaacct gttccgcccc tgcggcttgt tcatgccgcc
     1741 cggcaaatgc ccaatctgct acatcggaga attagggcca gtgcaacccg tcaaccgcga
     1801 catgcctaat ctcggcccgc gcgtcaccat cgtcgacaac accggcaaac ggcttgcgcg
     1861 attgggtggg ttgcacgccg gcctcggacc ggatcagttc atggcgccgc acggcctgac
     1921 cgtcgaccgc catggcgaca tctatgtcgg cgaggtctcc tggaccacct ggccacaatg
     1981 ttttcccgac aagccgcggc ccgccaattt acggtcgttg cagaaattcc gcagggtgaa
     2041 atagaccggg acgtcattgc gagacgcgct gcggccaact cctgaggcag gacaccgacg
     2101 catgaccatt ccaaacgttg cagcgcttcc cgaggatgca gcgatcgcca ccttggtcgg
     2161 acgggtttgg cggcctgacc gtaacggtcc ctcggtggtg gcgatccgcg acggtgcagt
     2221 attcgacatt tcggcaacca gtccgaccgt gcgcgacctt tgcgaatgct ccgaccccgc
     2281 cgaccgcgtg cggtccaggc aaggggagaa tctgggccgc gtggccgacc tgctcgccaa
     2341 tacgccgccg caaacccgcg atcgcggcaa accttggctg cttgccccga tcgatttgca
     2401 ggcgatcaaa gccgccggcg tgaccttcgc gatttcgatg ctggaacgtg tgatcgaaga
     2461 acgcgcccgt ggcgacatgt ccgccgccgt cgccatccga gctgaagtga caaacctggt
     2521 cggcgacgat ctggcaaagc taaagcctgg ctcgcccggt gcggcccgtc tgaaacaagt
     2581 gctgatcgaa caaaacgcct ggagccagta ccttgaagtc ggcattggtc ccgacgccga
     2641 aatcttcacc aaggcgcaac cgatggcagc ggtcggcaca tt
//
LOCUS       DATAVD010000013         3783 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3352175, whole genome shotgun sequence.
ACCESSION   DATAVD010000013 DATAVD010000000
VERSION     DATAVD010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3783
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3352175"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(47..1417)
                     /locus_tag="VHX39_00220"
     CDS             complement(47..1417)
                     /locus_tag="VHX39_00220"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX3989571.1"
                     /translation="MKQIIGVLVVVIVLIGGGFAGWLVLGRDPMSFAAGSTVALADYK
                     GGAVTGVPAELASADLVKRGEYLIHAADCQACHTAPGGAPFAGGLAFKMPFGTIYSTN
                     ITPDKQTGIGDYTDAQFLAAVHEGTRADGRRLYPAMPYTSYTYMTDADALAIKAYLWT
                     LAPVHAPTRQDQLSWPFNQRGLLAFWNVMFNPDERFRPNTSQSQQWNRGAYLAEAMGH
                     CGECHTPRNLIYGLDNHRKFAGALTAGWRAYNITSDKDSGIGDWNPSDVYLYLSTGHA
                     NGHGGAAGPMGEATDDSLSYLLPNDVHALVTYLRSVPAHASDLPRTVTTPAPASYKEG
                     PVAGADSRGEKIFAGACASCHDWTGVSPVTGFATLTGVRAVNDPSATNVAQAVIFGVN
                     RKTAQGRIFMPAFGQGYSDNDIAAVANYVTARFGAKGSHLTDKDVASLRKQATQQSRS
                     AEAPNG"
     gene            complement(1420..1878)
                     /locus_tag="VHX39_00225"
     CDS             complement(1420..1878)
                     /locus_tag="VHX39_00225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019089512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX3989572.1"
                     /translation="MLTLTINGQPREVDVPEDMPLLWVLRDHLGLVGTKYGCGIAQCG
                     VCTVHVAGKSVRSCQLAVGDVGTRAVVTIEGVGNTPNGARLQQAWMEGSVPQCGYCQA
                     GQIMSATALLDSTPHPSDSDIDAAMAGNLCRCGTYIRIRRAIRNAASRAA"
     gene            2578..2790
                     /locus_tag="VHX39_00230"
     CDS             2578..2790
                     /locus_tag="VHX39_00230"
                     /inference="COORDINATES: protein motif:HMM:NF015640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051983 - regulation of chromosome
                     segregation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HEX3989573.1"
                     /translation="MPSQHSLNVSLMEQLSGFIEDQVMSGRYRTSSEVVREALRLLER
                     DLGNKASVRGARATLSKDFTARSIAP"
     gene            2787..>3783
                     /locus_tag="VHX39_00235"
     CDS             2787..>3783
                     /locus_tag="VHX39_00235"
                     /inference="COORDINATES: protein motif:HMM:NF013502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEX3989574.1"
                     /translation="MTGTDRFPVVGIGASAGGVEALEGFFRGLPAEPGLAIVIVTHLS
                     PERESMLHEIVARYSSLPVQIVVDAMPVRINHVYVLSTNAELSIENRHLRIHTNSSRR
                     AHKPIDIFFSSLAVDLGELSAGIILSGGDSDGTLGIKAIKERGGLTLAQTGNGYGPHH
                     PDMPDSAISTGLVDFAIPVQEMGARLVDFVRSTQAVTEDLAAATDSDEPTIDKAMPEI
                     YGVLRNQVGHDFSGYKTRTFIRRVERRMQVTQSHTVEGYVERLRREPQEVSALFRDLL
                     INVTNFFRDAEAFESLAELVVPKLFDGRGADETVRVWVPGCSTGEEVYSIAILMRE"
BASE COUNT          762 a         1106 c         1182 g          733 t
ORIGIN      
        1 cagcgctgag agataagcgt cggattgggc caagttggac tggatgtcag ccattgggtg
       61 cctccgctga acgggattgc tgggtcgcct gcttgcgcaa gctggccacg tccttgtctg
      121 tcaggtgtga gcctttggcg ccgaaacggg cggtgacgta attggccacg gccgctatgt
      181 cattgtcgga atagccttga ccgaaggccg gcatgaagat cctgccctgg gcggttttgc
      241 gattgacgcc aaagatgacc gcctgcgcga catttgtggc actcggatcg ttcaccgcgc
      301 gcacgcccgt gagagtggca aaaccggtga ccgggctcac accagtccag tcatggcagc
      361 tggcgcaggc gccggcaaaa atcttctcac cgcgcgaatc ggcgcccgcc actggaccct
      421 ccttgtagga cgcgggcgca ggcgtggtga cagtgcgcgg gaggtcgctc gcatgggcgg
      481 ggacgctgcg cagataagtc accagagcat gcacgtcgtt cggcagcaga tagctgaggc
      541 tgtcgtcagt tgcctcgccc attggacccg ctgcgccgcc atgtccgttg gcatgaccgg
      601 tggaaagata gagatagacg tccgaagggt tccaatcgcc gatgccggaa tctttgtcgc
      661 tcgtgatgtt gtaggccctc cagcccgcgg tgagggcccc ggcgaacttg cggtggttgt
      721 ccagcccata gatgaggttg cgtggtgtat ggcattcgcc gcaatggccc atcgcctcgg
      781 caaggtaggc gccccggttc cattgctggc tctggctggt gttgggacga aagcgttcat
      841 cgggattgaa catgacgttc cagaacgcaa gcaggccgcg ctgattgaag ggccaggaaa
      901 gttggtcctg tctggtcggg gcatgcaccg gcgccaacgt ccagagatag gccttgatgg
      961 ccaacgcgtc ggcatccgtc atgtaggtgt aggaagtgta gggcatggcg ggatacagcc
     1021 tccggccatc ggcgcgagtg ccctcgtgca cggctgccag gaattgggcg tccgtgtagt
     1081 cgccaatgcc tgtttgcttg tccggtgtaa tgttggtgga atagatggtg ccgaacggca
     1141 tcttaaaggc caggccgccg gcaaagggcg cgccgccagg ggcggtgtgg caggcctggc
     1201 aatctgcggc atggatgaga tattcgccgc gcttcaccaa atcggcgctg gcaagctcgg
     1261 cgggaacgcc ggtgactgcg ccgcccttgt aatctgccag cgccacggtg gaacctgcgg
     1321 cgaacgacat gggatcacgg ccaagcacca gccagcccgc aaaacctccg ccgatcaaga
     1381 caatgaccac gaccaagaca ccgatgatct gtttcatggt cacgccgctc tggaggcggc
     1441 gttcctgatc gctcggcgga tgcggatata agtcccgcag cgacagagat tgcccgccat
     1501 ggccgcgtct atgtccgaat cgctggggtg gggcgtgctg tccagcaacg ccgtggccga
     1561 catgatctgc ccggcctggc aatagccgca ttgcggcaca gaaccttcca tccaggcctg
     1621 ctggagcctg gcgccgttcg gcgtgttgcc aacgccttca atggtgacga cagcgcgggt
     1681 tcccacatcg ccaacggcca gttggcagga acgcaccgac ttgcctgcta catgcacggt
     1741 gcagacgccg cattgggcga tgccgcagcc gtatttagta ccgaccagac cgagatggtc
     1801 gcgcagaacc cacaaaagcg gcatgtcctc cggcacatcg acttcgcgcg gttggccgtt
     1861 gattgtaagc gtgagcatgt ctctgtccct tccttacagt gaaatcgacg taccagcaga
     1921 actgacgtca gactatacgg atttgaagta ccgccgccag cgtccgctgg tactcgacca
     1981 gggcaaccgc cgttccgggt ggtctcgaac aatcgaggaa actgcgagga tcatccgaag
     2041 aagttaccga caacggcgac gtatacgtgg tcaatgtccc gtcgcaagcc gacaaagcta
     2101 cagcaaggtc gctatggctc gctggcgtca acgataattt tatatacggg ctgtgaagga
     2161 tggtcttgcg gctaaacgct cacgatccgc aaaagtcccc tgggcgggtc aacgcgtcgt
     2221 aagatcgcat cctcgcggaa cacggacaaa acccattcgc cgtcattcga cgcccgatca
     2281 ggatagaacc ggcccgcgga agcaacggct cgctgcgagg atcccaggta acttcagtac
     2341 tttgacgacg caagtaactc cggtggcctt cggtcgattt tgcgatctgc tcacccgcca
     2401 tggcctggtg gatcgcctga gttggctcgg cctgggataa tagtttcgat aatcgtcgcc
     2461 ccggtcgcgc gccgttaccg ggataaatgc ccagaccgcg gaacttcgcg gaccaggata
     2521 gcttacccta taaaagggtg gcaaagcctg acgccagcaa aacctccgga agcacctatg
     2581 cccagtcagc actccctgaa cgtgtcgctt atggagcaac tctcggggtt tatcgaagat
     2641 caagtgatgt ccgggcgcta tcgcacctca agcgaagtcg tacgagaggc tctccggctc
     2701 cttgagcgag atttgggcaa caaggcgtcg gtacgcggcg cgagagccac cctatcaaag
     2761 gattttacgg cgcgatcgat tgcaccgtga ccgggactga tcgttttcct gtcgttggca
     2821 tcggcgcgtc ggcgggtggc gtagaggcat tggaaggctt ctttcgcggc ctgccggccg
     2881 agcccggcct tgccattgtc atcgtgactc atctgagccc tgagcgggaa agcatgctgc
     2941 acgagatcgt ggcccgctac agttcgttac cggtccagat cgtggtcgat gcgatgccgg
     3001 tgcggatcaa ccacgtctac gttctgtcga ccaacgccga actgagcatc gaaaaccggc
     3061 acctgcgcat ccacacgaat tccagccgcc gcgcgcacaa accaatcgac atttttttca
     3121 gctcactggc cgtcgacctt ggtgaattgt ccgcgggtat cattctttcc ggcggtgatt
     3181 ccgacggcac acttggaatt aaggcgatca aggaacgggg cggcctgacg ctggcgcaaa
     3241 cgggtaacgg ctacggcccg catcatcccg atatgccaga tagcgcgatc tccacaggcc
     3301 tcgtggattt cgcaatcccg gttcaggaga tgggcgcaag gctggttgat tttgtgcgga
     3361 gcacgcaagc ggtaactgag gatttagccg cggcaactga ctccgacgag ccgaccatcg
     3421 acaaagcgat gcccgaaatt tacggcgttc tccgcaatca ggtgggacac gacttcagcg
     3481 gctacaagac caggacgttc atccggcgcg tagagcggcg catgcaggtc acgcagagtc
     3541 acacggtcga gggctacgtc gagcgactgc gacgagaacc gcaagaagta agcgcactgt
     3601 ttcgcgatct tctcatcaac gtcacgaact tttttcgtga cgctgaagcg ttcgaaagtc
     3661 tggccgaact tgttgtgccg aaactgttcg acgggcgggg cgcggacgag acggtgcggg
     3721 tttgggtgcc cggctgttcg acgggtgaag aggtctattc gatcgccatc ctcatgcgcg
     3781 agc
//
LOCUS       DATAVD010000014         3733 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2049662, whole genome shotgun sequence.
ACCESSION   DATAVD010000014 DATAVD010000000
VERSION     DATAVD010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3733
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2049662"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..2958)
                     /locus_tag="VHX39_00240"
     CDS             complement(106..2958)
                     /locus_tag="VHX39_00240"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HEX3989575.1"
                     /translation="MLNPVAMPKAPEAAAAQLSMAMAALASEQSPIPREAAIAAFRRH
                     LARIQTYVRQAFEQEQLTGLQAARLLGALVDGVIGGLFEHVIRDAGITPPEQLSVAAT
                     GGYGRGVLAPFSDIDLLFLTGDDPDPATLQAVEYMLYFLWDLGLKVGHATRSIDDCLI
                     EGAKDTTIRTALLDARYVTGDAALFADFHRRFRAACKEAGVAEYVAAKQAERAVRHRR
                     YGDSPFMVEPNVKEGRGGLRDIQTLYWIARYVFDTQTMGELADLGGILTQQEARHGRR
                     AWEFLWTVRFHLHYVAGRAEERLTFDMQPVVGARMGYTRHGRQDGVERFMRHYFLNAR
                     DIARLTRILEPAILRAALGPPAIEAETDQALLDAGFVLAEGKLLPMTGRDFDTDPIQM
                     LRVLRVARDRNLELHPLTVRSFIQNERRAVALRGDKTAAKLFMDLLCGKPPEKRRPGD
                     RPGERVPTHHPDGAKWLTILNETGFLGRYLPDWGRIVGQMQFDTYHIFTVDEHTIEAV
                     KVLNGMERGELIQIAPVASELIEQIESRRALYMAMILHDICKGRGGDHSELGAELALE
                     VCPGLGMTAEETETVSWLVLHHLLLSATAFKRDIDDPKTILDLVETIQSPERLRLLLI
                     LTVADMRAVSSKVWNGWKATLLRELYARVAEVLAGGLSTTERDVRVQRAKQAAADLLP
                     GWSDQDKAWFADLGYPGYWLSFDPDTHARHARLLRDAEQHKAPLTVDTQPLPARAVTE
                     VTIYAADHPGLFSQISGALAVAGASIVDARIHTMTNGMALDTFWIQDAAGGTFEQPHR
                     LAKLSALVEQALSGRLRLTQEIRKLSRDTFGKRMRAIHAPPRVVVDNHASNTHTILEV
                     NGRDRPGLLHDVTAAISNSGLQIASAHVTTYGVRAVDVFYVKDVFGLKVENDRKLAAL
                     REAMLKALDSPDEVPAAEAEANEAISRVRRRRTAAA"
     gene            complement(2987..>3733)
                     /locus_tag="VHX39_00245"
     CDS             complement(2987..>3733)
                     /locus_tag="VHX39_00245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEX3989576.1"
                     /translation="FLRQNALLAVLAQSGLPVPAEEARIGIVDRLFSRVGAADDLARG
                     RSTFMVEMTETAAILNQAGPRSLVVVDEIGRGTATTDGLAIAWAVLEALHSSVRCRTI
                     FATHFHELAELADRMPRIRPHTMRVKEWRGSVVFLHEVAEGAAGRSWGVHVAELAGVP
                     KPVVRRAASLLSALEKQNGPLAVGGVLGALPLFAATAAPDEVREEAPPDDELRRALAE
                     IDPDRLTPRDALDALYRLRALLPAPAGDDD"
BASE COUNT          749 a         1209 c         1065 g          710 t
ORIGIN      
        1 ccgtaaggat cagatcccgc gccgcacggg cgcgtggctc ataacctcac atgccgcaat
       61 attcgatctc gattttcatg tttcgcatct cctgatcaag agcatttatg ccgccgcagt
      121 gcgccgccgc cggacccgcg aaatggcttc attggcctcc gcttcggcag caggaacctc
      181 atccgggctg tccaatgcct ttaacatagc ctcgcgcaat gcagccaatt tgcggtcgtt
      241 ttccaccttc aggccgaaca catccttgac ataaaacaca tcgacggcgc ggaccccata
      301 agtcgtgaca tgcgccgaag cgatttgcag tcccgaattg ctgatagccg cggtgacatc
      361 gtgcaaaagt cccggccgat cgcggccatt gacctcaaga atcgtgtgcg tattcgacgc
      421 gtgattgtcc accaccaccc tgggaggcgc atgaatcgca cgcatgcgct tcccgaatgt
      481 gtcgcgcgag agcttgcgaa tttcctgtgt caaccgcagt ctgcccgaca atgcctgctc
      541 gaccagcgcg gacaatttcg ccagcctgtg tggctgttcg aacgtgcctc ccgcagcgtc
      601 ctggatccag aacgtatcca gcgccatgcc attcgtcatc gtatgaatgc gcgcatcgac
      661 gatcgacgca cccgccaccg caagcgcgcc ggaaatctga ctgaaaagcc caggatggtc
      721 ggctgcatat atggtgactt ccgtgacggc gcgagccgga agcggttgtg tgtcaaccgt
      781 cagcggcgcc ttatgctgtt ccgcgtcacg cagcaggcgc gcgtggcggg catgcgtgtc
      841 ggggtcaaac gacagccagt atcccggata gcccagatcc gcgaaccagg ccttgtcctg
      901 gtcagaccaa cccggcagca aatcggcagc cgcctgcttc gcccgttgca cacgcacatc
      961 acgctctgtg gttgacagac cgccggccag aacttcggca acccgagcgt ataactcgcg
     1021 taataaagtg gccttccagc cgttccatac tttcgacgat accgcccgca tgtcggcaac
     1081 cgtcaggatc agcaacaacc gcaaacgttc cggcgattga atggtttcca caagatcaag
     1141 tatggttttc ggatcgtcga tatcacgttt gaatgccgtc gcactgagca gcagatgatg
     1201 tagtaccaac caggaaactg tctcggtttc ctcggcggtc atgccaagcc caggacagac
     1261 ctccagcgcg agttcggcgc cgagttcgga atgatcgccg ccacgacctt tgcagatgtc
     1321 atgcaggatc attgccatat acagagcacg gcgggattcg atctgttcaa tcaactcgga
     1381 cgcgaccggc gcaatctgga tcaactcgcc gcgttccatt ccgttaagga cttttaccgc
     1441 ttcgatcgtg tgctcatcga cggtgaaaat atgataagta tcgaattgca tctggccgac
     1501 aatgcggccc cagtccggca aataacgtcc aaggaatcca gtttcattca atatggttaa
     1561 ccacttggct ccatccggat gatgcgtcgg cacccgctct cctgggcggt ctccaggacg
     1621 tcgtttctcg ggcggcttgc cgcacaacag gtccataaac aatttcgcag cggttttatc
     1681 cccgcgcaac gcgaccgcac ggcgctcatt ctggatgaag gagcgcacag tcaggggatg
     1741 aagctccaga ttccggtcac gcgcgacccg cagaacgcgc aacatctgga tcggatcagt
     1801 atcgaaatca cgaccggtca tgggcagcag cttgccctcg gccagcacga agcctgcatc
     1861 cagcagagcc tgatcggtct ctgcctcaat cgccggcggc ccgagcgccg cgcgcaggat
     1921 ggccggctcc aggatccggg tcaggcgggc gatgtcgcgg gcgttgagga agtagtggcg
     1981 catgaaccgc tccacaccgt cctgcctgcc gtgccgcgta taacccatgc gcgcgccgac
     2041 caccggctgc atgtcgaagg taaggcgttc ctccgcgcga ccggcgacgt aatgcagatg
     2101 gaagcgcacg gtccatagga attcccacgc gcgccgaccg tggcgcgctt cctgttgggt
     2161 caggataccg ccgagatcgg ccagttcgcc catggtctgc gtatcgaaca cataccgtgc
     2221 gatccagtac agcgtctgga tatcgcgcag gccgccgcga ccttccttga cgttcggttc
     2281 caccatgaac ggactgtcgc cgtaacggcg atgccgcacg gcgcgttccg cttgtttcgc
     2341 agccacgtat tccgcgacgc cggcttcctt gcaggcggcg cgaaaccggc ggtgaaagtc
     2401 ggcaaacaac gcggcatcac cggttacgta gcgcgcatcc agtaatgccg tgcggattgt
     2461 ggtgtccttc gccccttcga tcaggcagtc gtcgatcgat cgtgtcgcat gcccaacctt
     2521 aagcccgagg tcccacaaga aatacagcat gtattcgacg gcctgcagcg tcgccggatc
     2581 gggatcgtcg ccggtgagaa acaacagatc gatgtcgctg aacggcgcca gcacgcctct
     2641 gccataaccg ccggtcgcgg ccacgctcaa ttgttccggc ggcgtgatgc cggcgtcacg
     2701 gatcacatgc tcgaacaggc cgccgattac accgtcgacc aatgctccca acaggcgggc
     2761 ggcttgcaat ccggtcagtt gttcttgctc gaacgcctgt ctgacgtagg tctggatgcg
     2821 cgccagatgc cggcgaaatg ctgcgatggc tgcctcacgc gggattggcg actgttccga
     2881 ggcaagtgct gccatcgcca tcgacaactg cgcagcggcg gcttccggcg ccttgggcat
     2941 cgccaccggg ttcagcatga aataggccag tttcgataag gtttcatcaa tcgtcgtctc
     3001 cggcaggggc aggcaggagg gctctcagcc ggtagagtgc atccaacgca tcccgcggtg
     3061 tcaaccggtc cgggtcgatt tcagcaagcg cgcggcgcaa ttcatcatcc ggcggcgctt
     3121 cttcccttac ttcatctggg gctgcagtgg cggcgaacaa gggcaaagcc cccaacactc
     3181 cgccgaccgc gagcggccca ttttgttttt ccagtgcact caacagcgaa gcagcgcgac
     3241 gcacaacagg tttcggcacg ccggcaagtt ctgcaacatg cacaccccag gatcgtcccg
     3301 ccgcaccttc agcaacttca tgcaagaaca ccacgctacc tcgccactcc ttcacgcgca
     3361 ttgtatgcgg acggattcgc ggcatccggt ccgccagttc ggcaagttca tggaagtgtg
     3421 tggcgaaaat ggtacgacat cgcacgctgg aatgcagcgc ctcgaggacc gcccaggcga
     3481 tggcgagacc atcggttgtt gcggtgccgc ggccgatctc gtcgacgacg accagcgatc
     3541 gcgggccggc ctgattgagg atcgccgccg tctcggtcat ttcgaccatg aaagtcgagc
     3601 gcccgcgtgc cagatcgtcg gccgcgccaa cccggctgaa cagccgatcc acgatgccga
     3661 tccgggcctc ctccgccggt accggcagcc ccgattgggc cagcacggcc agcagcgcgt
     3721 tttgccgcag aaa
//
LOCUS       DATAVD010000015         3111 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2979746, whole genome shotgun sequence.
ACCESSION   DATAVD010000015 DATAVD010000000
VERSION     DATAVD010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3111
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2979746"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            38..706
                     /locus_tag="VHX39_00250"
     CDS             38..706
                     /locus_tag="VHX39_00250"
                     /inference="COORDINATES: protein motif:HMM:NF020419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="HEX3989577.1"
                     /translation="MTDEFIPRLDILPKPQLRLWNELAEVPTEFVLYGGTAIALHLGH
                     RQSVDFDFFGSRKFDPASLVASVSFLKLATIIRQEANTLTVLVNRGGPVKLSFFGLPR
                     LPNLAMPHIAPENGLRVAALLDLAGTKVSVVQRRAEAKDYQDIDAMISDGRIDLTTAL
                     AAARAIYGDRFNPQITLKALSYFGDGKLRRLPRVMKDRLIKAVGEVDLDRLPAIARSK
                     RRCR"
     gene            697..1077
                     /locus_tag="VHX39_00255"
     CDS             697..1077
                     /locus_tag="VHX39_00255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989578.1"
                     /translation="MPMKPIPLTRETRAVARRVVWFETPAEALADPIRFMAYAMAYAT
                     HEDMKRLRRHVSDEDFREALDHAPPGIIDPRSWAYWNLKMDRYPPPPLPRRRLASQTR
                     TMPKTEFQDAKPARVKVIKQSPAD"
     gene            1201..2415
                     /locus_tag="VHX39_00260"
     CDS             1201..2415
                     /locus_tag="VHX39_00260"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3989579.1"
                     /translation="MITRRTALSAGLAAAAAGRISRARAADTPGVTATEIKIGNTMPY
                     SGPASSYSVIGRTETAFFKMVNDQGGVAGRKINFISLDDGYSPPKTVEDIRQLVEQEE
                     VDFCFQTLGTPPNSAIASYLNQKKVPQLFVGSGASKWSDYKKYPWTMGWQPNYRTEAQ
                     IYTKYMLQTMKDPKVGILYQNDDFGKDYPTGVRDALGDKWDKLVVKNISYETTDATID
                     SQIAELQSSGANVLLVAGIPKFAAQSIRKVADLSWKPTFFMTNVSTSVGTVMQPAGPE
                     KSVGMLSTQYLKDPTDPSWTNDPGMKEWRAFMAKYNPSGDVTDAATVFAYGISLTMLQ
                     VLKQCGSDFSRENVMKQAESLHGVENPTLLPGIKISTTPTDHRPIKAMQLVRWDGKTW
                     VRFGDLIEGTNT"
     gene            complement(2519..>3111)
                     /locus_tag="VHX39_00265"
     CDS             complement(2519..>3111)
                     /locus_tag="VHX39_00265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HEX3989580.1"
                     /translation="ATPPADGTNSKLTITWTAPVVDGTHGAATGYNLRSSPSGAGTWT
                     TVSGVTSPYTLTALAGGSAIDVEVQGTNAAASPGAWSAVTTGTTWGCTVTWGSWQAGT
                     SQVHNTAVAPNTGVNIFAVAAPTAVTGASFAWSAGNTTVPATGLIAATTDGQTNGWGQ
                     WFNAPATTGTFYLWALPQGAGSTTIGALVSSAITVS"
BASE COUNT          638 a          951 c          932 g          590 t
ORIGIN      
        1 ttccgccagg gttcgtccgt gttatcctga cctccgcatg accgacgagt ttatacctcg
       61 ccttgacatc cttccaaagc cgcagcttcg gttgtggaac gaattggctg aggtgccaac
      121 ggagtttgta ctgtatgggg gtaccgcaat cgcactgcat ctcggccacc gacagtcggt
      181 agatttcgac ttcttcggga gtcggaagtt tgaccctgca tcgctggttg catccgtttc
      241 gttcttgaaa ctggcgacta taattcgtca ggaggcaaat actttgaccg tcctcgtcaa
      301 ccgcggcggt cctgtgaagc tctcgttttt tgggctacct cgattgccga acctcgcaat
      361 gcctcacatc gcgccggaga atggattgcg ggtcgcggct ctgcttgatc tcgccggcac
      421 gaaagtgtca gttgtgcaac gtcgggccga agcgaaggat tatcaggaca tagatgcgat
      481 gataagtgac ggtcggatcg atctgacgac ggcgctcgct gcggcgcgag cgatctacgg
      541 cgaccgcttc aaccctcaaa taacgttaaa ggcgctatcc tattttggcg acgggaagct
      601 gcgccgcttg cccagggtga tgaaagaccg gctaatcaaa gcggtggggg aggttgacct
      661 cgaccggttg cccgcaattg cccgttcgaa gcgccgatgc cgatgaaacc catcccactt
      721 acccgcgaaa cgcgcgcggt cgctcgtcgg gtcgtctggt ttgagacccc ggccgaagcg
      781 ctcgccgacc cgatccggtt tatggcttac gcgatggcgt atgccaccca cgaggacatg
      841 aagcggctgc ggcgccacgt ctcggacgaa gacttccgcg aggcgctcga tcatgcgccc
      901 cccggcatta tcgacccgcg ctcctgggct tattggaatt taaaaatgga tcggtatccg
      961 ccgccgccgc tgcccaggcg ccggctagca tcgcaaaccc gaacgatgcc gaaaaccgag
     1021 tttcaggatg ccaaacccgc ccgtgtgaaa gtcatcaagc agtcccctgc cgactgaccg
     1081 cgatcagccg attttgccgc attccccgat tgctcctgcc gtaaaacctg acacactgtc
     1141 gacgtggccg gcgtcacacc tggccgcaag ggagcttctt aacaatcggg agaacaaacg
     1201 atgattactc gccgcaccgc cctgtccgcc ggcctcgccg ccgctgccgc gggccggatc
     1261 tcacgcgcgc gcgccgctga tacaccgggc gtcaccgcga ctgagatcaa gatcggcaac
     1321 accatgccat atagtggccc agcgtcttcc tacagcgtga tcggccggac cgagacagcg
     1381 tttttcaaaa tggtcaatga ccagggtggt gtcgccggcc gcaagatcaa cttcatctcg
     1441 ctcgacgacg gctacagccc gccgaagaca gtcgaggaca ttcgccagtt ggtcgagcaa
     1501 gaggaggttg acttctgctt tcaaaccctt ggcactcccc ccaattcggc aatcgcctcg
     1561 tatctgaacc agaaaaaggt gccgcaactg ttcgtcgggt ccggtgcgag caaatggagc
     1621 gactacaaaa agtatccctg gaccatgggc tggcagccca actaccgcac cgaggcccag
     1681 atctacacga aatacatgct gcagaccatg aaggatccaa aggtcggcat tctttatcag
     1741 aacgacgatt tcggtaagga ctacccgacc ggcgtgcgcg acgcactggg cgacaaatgg
     1801 gacaagctcg tcgtcaagaa catcagctac gagaccaccg atgcgacgat cgactcgcag
     1861 atcgccgagt tgcagagttc tggtgccaac gttttgctgg tcgcgggcat cccgaaattt
     1921 gccgcccagt cgatccgcaa ggtcgctgac ctgagctgga agccgacatt ctttatgacc
     1981 aacgtgtcga cctcggttgg caccgtgatg cagccggcgg gaccggaaaa atccgttggc
     2041 atgctcagca cgcagtatct gaaggatccg accgatccga gctggacgaa cgatcccggc
     2101 atgaaggaat ggcgggcgtt tatggccaaa tacaatccca gcggcgatgt caccgatgcc
     2161 gccaccgtgt tcgcttatgg gatcagcttg accatgctgc aggtgctgaa gcaatgcggc
     2221 agcgatttct cgcgcgagaa cgtcatgaag caggccgaaa gcctgcacgg tgtggagaac
     2281 ccaacgctgc ttccggggat caagatcagc accaccccta ccgaccatcg cccgatcaaa
     2341 gccatgcaac tggtgcgctg ggacggcaaa acgtgggttc gtttcggcga cctgattgaa
     2401 ggcaccaaca catagccgca ccggcttctc ggatacgcgg cgcgcgggga gcatcaggag
     2461 cgtgtgagcg ccgggagtga gtggaacatc gatccatcac tcccggtgca gtgccgtgct
     2521 atgaaacggt gatcgccgac gagaccagcg ccccaatggt cgtgctcccg gcgccttgcg
     2581 gtaaagccca gaggtagaat gtgccggtcg tcgcgggtgc gttgaaccac tgaccccaac
     2641 cgttggtttg gccatcggtg gtcgctgcga taagacccgt ggccgggact gtggtattgc
     2701 ccgcggacca cgcgaacgag gcaccggtca cagcggtcgg cgcggcgacc gcaaatatat
     2761 tgaccccggt gttcggagcg acggctgtgt tgtgaacctg tgacgtgccg gcttgccagg
     2821 atccccaggt gacggtgcag ccccaggtcg ttcccgttgt gacggccgac cacgcaccgg
     2881 ggcttgccgc agcattggtc ccctggacct cgacgtcgat cgcacttcca ccggcaaggg
     2941 cggtcaatgt gtaagggctg gtaacgcccg acacggtcgt ccaggtgccg gccccggagg
     3001 gactggaacg caaattgtat ccggtggccg cgccgtgcgt gccgtcgacc accggggctg
     3061 tccaggtgat ggtcagcttg gaattggtgc cgtcggccgg cggcgtggca t
//
LOCUS       DATAVD010000016         2536 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_560445, whole genome shotgun sequence.
ACCESSION   DATAVD010000016 DATAVD010000000
VERSION     DATAVD010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2536
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_560445"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..690
                     /locus_tag="VHX39_00270"
     CDS             <1..690
                     /locus_tag="VHX39_00270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989581.1"
                     /translation="RIAAGDRGTALTLHSGTREINEMVTAVETLRQAALVADATALRH
                     RLAARQRLEMLREAVGIARTVEAPARALDRGVASLSDGFDATIALITTLTRAPPPTLR
                     LAATAVRAGLAEMRDSAAEFDAAFAAAAETEDQPEAEFVAHILAVRAQVDRRDAAVRR
                     FVLPSLVALRDAAAAAGEVSGTALRDLVSDQFACVEETVAAISSMLATMTRASAIVRG
                     LPLEEDAPLAA"
     gene            1076..2110
                     /locus_tag="VHX39_00275"
     CDS             1076..2110
                     /locus_tag="VHX39_00275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3989582.1"
                     /translation="MAVEQKAYPHPHVNDVWLARLHEDILEPELPIIDAHHHLWERPS
                     GVYLLPQLKADVTAGHNVRGTVFIQCGYGYRNEGPPELRPVGETETVVRIAGGSGPGI
                     CAAIVGYTDFRLGDRVDAVLEAHVAAGKGRFRGIRQSAGWDPAILTQTSAPAQPGLLA
                     DPAFRSGLGRLARFGLSYESSLYHPQLPELAALARALPELPILANHCGGYIAIGPHAE
                     DLGETFSRWRAGLRELAACPNVYLKLGGQAMSIRGVAFHEQVLPPSSGELANAWRPVM
                     ETCIETFGANRCMFESNFPVDKGMCGYVSCWNAFKRIAAGCSVTEKADLFAGSAARFY
                     RLGDVGALSV"
     gene            2137..>2536
                     /locus_tag="VHX39_00280"
     CDS             2137..>2536
                     /locus_tag="VHX39_00280"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3989583.1"
                     /translation="MELGYFSMPSHPPERGLKAGHDWDLQTLRWLDELGYSEAWIGEH
                     HTAPWEPHPAPDLLIAQALLQTKRIKIGPGGFLLPYHHPAELANRVAMLDHLSEGRLL
                     FGVAASGLPSDWAMFDVDGTTGAHREMTREA"
BASE COUNT          416 a          760 c          877 g          483 t
ORIGIN      
        1 cggatcgccg ccggtgatcg cggtacggca ctgacgctgc actcgggcac tcgggaaatc
       61 aatgagatgg tgacggccgt ggagacgctg cgccaggccg cgctcgttgc tgatgcaacc
      121 gcgctgcgac accgtctggc ggctcggcaa cgacttgaaa tgttacgcga ggcggtcgga
      181 attgcgcgca ctgtggaagc gccggcgcgt gcgttggacc gtggggtcgc gagcctgtcg
      241 gacggcttcg atgccacgat tgctctgatc acgaccctga cgagggcgcc gccaccgacg
      301 ttgcgcctcg ccgcgaccgc cgttcgcgcc ggtctcgcgg aaatgcgtga ttctgccgcc
      361 gagtttgatg cggcgttcgc cgctgcggcc gagacggaag accagccgga agcggaattt
      421 gtggcccaca tccttgcggt acgggcgcag gtcgaccggc gggatgcagc ggtccggcgg
      481 tttgtgctgc ccagtttggt ggcgttgcgg gatgcggccg cggcggcggg cgaggtatcg
      541 gggactgcat tgcgtgacct ggtgagcgac cagttcgcct gcgtcgagga aaccgtcgcg
      601 gcgatttctt caatgttggc cacaatgacc cgcgcttcgg ccatcgtgcg cggtttgcca
      661 cttgaggagg atgcgccgtt ggcggcgtga ggacgtgccg ggtgatcgat tggattgagg
      721 aagtgcgagg gctccgccct tcgaaccccc ccggggcttt gccccggaac cccagcaaag
      781 gtcgaggacc tttgcaatct gtccattggc tatggacaag agggggccgg ccctggcggg
      841 tattaaggtc cgtggcggcc ccctctcatc catagccaaa ttgaatggtt ccaaggaccg
      901 ctgcccttgg tggaggtcca ggaggatcgg gccgcgaaga gcggaccgat gcctcctggt
      961 cggggtccgg ggcagaagcc ccggcatttc accactccac cgatcaccct gcgggtttcc
     1021 cgcccgtcgc gcgcggcgta ggctgttcgc cggaaaccaa ccgggagggc acggcatggc
     1081 cgtcgaacag aaggcgtatc cgcatccgca cgtcaacgat gtctggctcg cacggctgca
     1141 tgaggacatt ctcgaaccgg agctgccaat catcgacgcg catcaccatt tgtgggagcg
     1201 gccgtcgggc gtttatttac tgccgcaact gaaagccgac gtcacggccg gtcataacgt
     1261 gcgcggcacg gtgttcatcc aatgcggcta tgggtatcgc aacgaaggcc cgcccgaact
     1321 gcgtccggtg ggcgaaaccg aaaccgtggt gcggattgcc ggcggcagcg gtccaggcat
     1381 ttgtgcggcc attgtcggct acaccgattt ccggcttggc gatcgggtgg atgccgtgct
     1441 ggaagcccat gttgcggccg gcaagggccg gttccgcggc atacggcaaa gtgccggttg
     1501 ggatccggcg atcctgaccc agacctcggc gccggcgcag ccgggactgc tggccgatcc
     1561 ggcgttccga tctgggctgg ggcggttagc ccgcttcggt ttgtcgtacg aaagttcgtt
     1621 gtatcatccg caacttcccg aactcgccgc gctggctcgc gcgttgccgg agctgccgat
     1681 cctcgccaac cattgcggcg gctatatcgc gatcggtccg catgcggaag atctcggaga
     1741 gacgttttcg cgttggcgcg ccggtctgcg cgaactcgcc gcctgcccta acgtctactt
     1801 aaaactgggc ggccaggcga tgagtatccg cggcgtggca tttcacgaac aggtgctacc
     1861 gccatcgtcg ggcgagctgg ccaatgcgtg gcgtccggtg atggagacat gtatcgaaac
     1921 gtttggggca aaccgttgca tgttcgagag taacttcccg gtggacaaag gcatgtgcgg
     1981 ctacgtctcg tgctggaacg cgttcaagcg gattgctgcc ggatgctccg tcaccgaaaa
     2041 ggctgacttg ttcgcagggt cggccgcgcg gttctatcgt ttgggtgacg tgggagcgct
     2101 gagcgtttaa cctcggtcga gtaagggaga actgccatgg aactgggtta tttctcgatg
     2161 ccgtcgcacc cgccggagcg cggcctgaag gccggccacg actgggacct gcaaaccctg
     2221 cgctggctgg atgaactggg ttattccgaa gcctggatcg gcgagcacca caccgcgccg
     2281 tgggagccgc acccggcgcc tgatttgttg attgcccagg cgctgttgca gacaaagcgg
     2341 atcaagatcg ggccgggtgg gttcttgttg ccgtatcatc acccggcaga actggcgaac
     2401 cgcgttgcga tgctggacca tttgtccgaa ggccgcctgc tgtttggtgt cgccgcctcc
     2461 ggtctgccaa gcgattgggc gatgttcgat gtcgacggca cgaccggtgc gcatcgcgag
     2521 atgacgcgtg aagcgc
//
LOCUS       DATAVD010000017         1758 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1491224, whole genome shotgun sequence.
ACCESSION   DATAVD010000017 DATAVD010000000
VERSION     DATAVD010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1491224"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1758)
                     /locus_tag="VHX39_00285"
     CDS             complement(<1..>1758)
                     /locus_tag="VHX39_00285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989584.1"
                     /translation="DTTPPAPQDELTDDQLDALDPDDEIGGDAAAHPVFAFPDILVGP
                     STSKQFNTIEEWIRPVACWRLDDTRFEFDSSFVKPGAARELRLLQDTRDDHPGATLSL
                     FGHADPAGQDDYNKVLSGRRARAIYGILLRDADLWEQLFHGDPKCAGDKWGQSSLETM
                     LTTVGRDPADAVSLNAKGAGDDRKDLYLAYMNRLCGPKLSLKSTDFLARGSDANLRGD
                     VQGCGEFNAVRRFSATENQQFQQPKKKADRDNENAPNRRVVAFLFAPTLVIDGKRWPC
                     PAATQGIGACTKRLFVDPQTRRANQRNRREFATEKNTFECRFYHRLAVQSPCESSTLT
                     ILQRLRVRLQLVYLDPMGAERPFPKGFPVTAVAKDGTARRSRVGDGGKVRMVVDRPPG
                     GFFLQFDSNSRLYFASAAPGSGATPQDKLLGNDGVDDAVKQGFRFFQVPEQWSTQNSD
                     WVNVQSPLFANGSFNGIDDLAAELGTIDSPVKMVLNPHWQYLRWVYFDRSALKQVSCP
                     PMIVEGFESASKPATITDTRSNWTTDGNKNQCLPWIKRDRNRPDADVMVQLDSRPNRL
                     FAQSGQALALTVDESGSPGT"
BASE COUNT          324 a          521 c          561 g          352 t
ORIGIN      
        1 cgtccccggg gatccgcttt cgtccacagt cagcgcaaga gcctgtcctg actgggcaaa
       61 cagccgattg gggcgggagt ccaactgcac cattacatcg gcatccgggc gattgcggtc
      121 tctcttaatc cacggcaggc actgattctt gtttccgtcc gtggtccaat tgctccgcgt
      181 gtccgtgatc gtggctggtt tactggccga ctcgaagcct tcgacaatca tgggagggca
      241 cgaaacctgc ttgagggctg agcgatcgaa gtatacccaa cgtaaatact gccagtgggg
      301 gttgaggacc atcttcaccg gcgagtcgat ggtgcctagt tccgctgcga gatcgtcgat
      361 gccgttgaag ctgccgttgg cgaacagcgg cgattgcaca ttcacccagt cggaattctg
      421 cgtggaccat tgctcaggaa cctgaaaaaa acgaaagccc tgcttgacgg catcgtccac
      481 gccgtcattg cccagcaact tgtcttgcgg ggtagccccg gagccgggag ccgcgctggc
      541 aaagtacagg cggctgttgg agtcgaactg caggaagaaa ccgcctggtg gacgatccac
      601 caccatccgc actttcccgc cgtcgcctac cctcgacctg cgcgcagtgc cgtctttcgc
      661 gacggcggta acggggaagc ccttgggaaa cggccgctcc gctcccatgg gatcgagata
      721 gaccaactgc agccggaccc gcagccgctg aaggatggta agggtagagg actcgcaagg
      781 cgactgcaca gcgagccggt gatagaacct gcattcgaag gtgttctttt cggtcgcgaa
      841 ttcgcgacgg ttgcgctgat ttgcgcggcg ggtctggggg tcgacaaaca gccgcttggt
      901 gcacgctcct attccctggg tcgccgccgg acagggccag cgtttgccat cgatgaccag
      961 ggttggagca aagaggaaag cgacgacgcg gcgattgggt gcgttctcat tatcccggtc
     1021 ggccttcttt ttcggctgtt ggaactgctg attttcggtc gccgagaagc gccgcacggc
     1081 attgaattcg ccgcagccct gcacgtcgcc gcgcaggttc gcatcgctgc cgcgggccag
     1141 aaagtcggtg gacttgaggc ttagcttagg gccgcaaaga cggttcatgt aggccagata
     1201 gagatccttg cgatcgtctc cggccccttt ggcgttcagg ctgacggcgt cggccgggtc
     1261 gcgacccacc gtggtcagca tggtttccag gctggattgg ccccacttgt ccccggcgca
     1321 tttggggtcg ccgtggaaca gctgttccca caaatcggca tcgcgcagca agatgccgta
     1381 aatcgcccgc gcacgccggc cgctcaatac tttgttgtag tcgtcctggc ccgctgggtc
     1441 ggcatgtcca aacaacgaga gcgtggcgcc gggatggtca tcgcgtgtgt cttgcagcaa
     1501 gcgcaattcg cgggcggcgc cgggtttgac aaaactcgag tcgaactcga accgcgtgtc
     1561 atccaggcgc cagcaggcga cggggcggat ccactcctcg atggtgttga attgcttcga
     1621 ggtcgacggc cctacaagaa tatccggaaa ggcgaaaacc gggtgtgcgg cggcatcgcc
     1681 cccgatttcg tcatccggat cgagggcatc gagctgatcg tcggtgagct catcctgagg
     1741 cgccgggggt gtcgtgtc
//
LOCUS       DATAVD010000018         3971 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2794020, whole genome shotgun sequence.
ACCESSION   DATAVD010000018 DATAVD010000000
VERSION     DATAVD010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3971
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2794020"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            88..906
                     /locus_tag="VHX39_00290"
     CDS             88..906
                     /locus_tag="VHX39_00290"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3989585.1"
                     /translation="MELGLQGKHAIVTGGSRGIGKAIARELAREGVDVAIVARTKDAL
                     EATARELAAETNRHILPLAADVTSREQVDRMVAEAAQALGGLHILVNSGSSPGGSATA
                     TGPIDSVVDEDLIQDFNVKYVGALRCSRAVIPFMKQAGWGRIINISGANARNAGNLSG
                     GVRNAGLVHMTKTLAVQLGRHGITVNCIHPGTTRTERTPSLLAARATQLGVSPDEAER
                     QDFAPDSPRGNSICRMVDASEVAFVTVFLASDKAWAVSGELVAATGGAGRTVHY"
     gene            complement(944..1771)
                     /locus_tag="VHX39_00295"
     CDS             complement(944..1771)
                     /locus_tag="VHX39_00295"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX3989586.1"
                     /translation="MSGAHALKSDHDLRATNGPRPPRVVTWQQEDQVQAAAPAADVDG
                     TAYTLSAAHPTLGRLTEQSRRALLRWSRFRAVKRREAVWRQGDLAGAVILVVHGYLKR
                     SIPLADGNDVLLGIVGPGDCAGETTVLLEQPHDANLTALSECVLLMIDARQFRHAFGQ
                     EPEALLAIMRSTTEDLQKTTQQLLDGRARTTPGRLAKVLLCLPRSPSRGPGGATSLCL
                     RLSQSELGAMAGICREVVNRYLAIWRDAGWVELSDGRVTSFDMTAIVNLSRDEASPA"
     gene            2167..2358
                     /locus_tag="VHX39_00300"
     CDS             2167..2358
                     /locus_tag="VHX39_00300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989587.1"
                     /translation="MKNEQANAPTALTEEQTALVSGGALASLNLVRAGCPTCTSGLPM
                     AFQNIAAVINPAPMVQAYG"
     gene            2388..3725
                     /locus_tag="VHX39_00305"
     CDS             2388..3725
                     /locus_tag="VHX39_00305"
                     /inference="COORDINATES: protein motif:HMM:NF016970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HEX3989588.1"
                     /translation="MRSSHGTVSLSGNGVGIVWWPELDPLCRPGEGLVHVIETEPETF
                     WVPCETPLSGFASQLPRAIEHLSAPKLLHCVGAPFGGGAAQSPAHLQALKSDITTFQP
                     LWISDHLSFNQFTQAGASGTPETTCTGFFLPPAQCRFGVAQAAKHIKRRRTETGVPIA
                     FENPVSYLPPHPGEMQDGDFAAEVAEAADCGILLDLHNLLCNERNGRQSVADYCRSIP
                     LDRVWEIHVAGGQYERGFWLDAHSGVVEPALLEIVAELVPRLPSLRALIFEIVPDFIA
                     ATGLSAISTCLGQLNDIWAARPSVVAPVGRRRVSARFSETITPPLWEDTIGAAITGRA
                     FPGMPEDFADWAHAAEQALRLYRFLAQEGRACALVDTAPRTIRSLLSTLGEAQTRDLL
                     ASFWIRSAPAYTNAQEARAFLEYLSSVDLAVPNLATDVANDKAALEQLAALRQ"
BASE COUNT          765 a         1260 c         1186 g          760 t
ORIGIN      
        1 ctgccgcagc cgcccttgcg tccgctttcc cgagagagaa caatcagccg agagccagta
       61 aaatcagcac caacgggaga gaacgccatg gagctcggac tgcaaggcaa gcatgcgatc
      121 gttaccggcg gcagtcgggg cattggcaag gccatcgccc gcgaactggc gcgcgaaggc
      181 gtcgacgtgg cgatcgtggc acggaccaaa gacgctctgg aggcgacagc acgggagctg
      241 gccgccgaga caaaccggca cattcttccc ctcgccgccg atgtcaccag cagggaacag
      301 gtcgaccgca tggtcgccga ggcagcgcag gcattgggtg gactgcatat tctggtgaat
      361 agcgggtcct cgccgggcgg ttcggcgacc gcaaccggcc cgatcgacag cgtcgtcgac
      421 gaagatctga tccaggattt caacgtgaag tatgttggtg cactgcgctg ctcccgtgca
      481 gtcattccgt tcatgaagca ggccggctgg ggccgcatca tcaacatcag cggtgccaac
      541 gcccgcaacg ccggcaacct cagcggcggg gtacgcaacg ctggccttgt gcacatgacc
      601 aagacgcttg cggtccagtt gggtcgtcac gggatcacgg tcaattgtat ccatcccggc
      661 acgacccgca ccgagcgcac accaagcctg ctcgcagccc gcgccactca actgggcgtg
      721 tcaccggacg aggcggagcg gcaggacttc gctccggact caccgcgcgg caattccatc
      781 tgccgcatgg tggacgcctc cgaggttgca tttgtcaccg tatttcttgc ctccgataag
      841 gcctgggcgg tctccggcga gctggtcgcg gcaaccgggg gagccggtcg gaccgttcat
      901 tactgaggca cagcggctcg ttcaatcact tccaggcgtg gcgctatgcc gggctggctt
      961 catctcgcga cagattaacg atggcggtca tatcgaacga tgtgacccgt ccatcggaca
     1021 attcgaccca accggcatca cgccagatag caaggtagcg gttgaccact tcgcggcata
     1081 ttccggccat cgcacccagt tcactttgcg agagacgcag gcaaaggctc gttgctccgc
     1141 ctggaccacg cgatggcgaa cgtggcaggc aaagcaagac tttcgccagc cggccaggcg
     1201 tcgtccgcgc acggccgtcg agcagctgtt gcgtcgtctt ttgcaagtcc tccgtggtgg
     1261 agcgcatgat cgccagcagt gcctccggct cttgaccaaa tgcatggcgg aactgccgcg
     1321 catcgatcat cagcagaaca cattccgata gagccgtcag attggcatcg tgtggctgtt
     1381 ccaacagtac ggtggtttct ccggcgcagt caccgggacc aacgataccg agcaggacgt
     1441 cattgccgtc cgccaaaggg atcgatcgtt tcaggtatcc gtgcaccacc agaatgacgg
     1501 cgcccgcgag gtcgccttgc cgccagaccg cctcccgccg cttcaccgca cggaacctgg
     1561 accagcgcag caacgcgcgg cgagactgtt ccgtcaatct gcccagagtg ggatgggctg
     1621 cactcaaagt gtaggcagtc ccgtcgacat ccgctgccgg agcggctgcc tggacctgat
     1681 cctcctgttg ccaggtaacg acccgaggcg gtctgggccc gtttgtcgcc cgcaaatcat
     1741 gatccgactt cagcgcatgt gcacctgaca tggaaacttc tcctgacgtt gagtttcgcg
     1801 tgggagaagc gataggcgga ggggtgtcat ccgggcggct aaagggatgt caaaaatcga
     1861 cccggcggcg tcaaaagtgc cgtcatcggg acgggcgccc gccggcagcc tgatacgacc
     1921 ccggtcgagg ccggcctatg acgccggtaa caatttgggt cgatccccac gcgagcatcg
     1981 cggctgatcg gacaatcaat ccgtatcgtt accgactgtg actcgaatca taaccggcgc
     2041 cacctgccgg aattaccaat ccgttgcgcc caatgcactg ccaattctgg ctcggcgttg
     2101 tccggccgcc gccgtaccca aagctcaggg ttcggcgatc atctcactct tagaaggata
     2161 cgaccgatga aaaatgaaca ggccaatgct cccaccgccc tgactgagga acagaccgca
     2221 ctggtgtccg gcggcgctct cgcctctctc aatctcgtcc gcgcgggttg cccaacctgc
     2281 acgtccggcc tgccgatggc gttccagaac atcgccgccg tcatcaatcc ggcgccgatg
     2341 gttcaggcgt acggctgatc ttcacaccga accagaacga gtccgtcatg agatcttcgc
     2401 acgggacagt gagcttatcg ggtaatggcg tcggcatcgt ctggtggcca gaactcgatc
     2461 cactttgccg tcccggcgaa ggtcttgtgc acgtgatcga gaccgagcct gagactttct
     2521 gggtgccgtg tgagacgcca ttatccggat tcgcatcaca gctacctcgg gcaatcgaac
     2581 atttgtcagc accaaagctg ctgcattgcg ttggcgcacc atttggcggt ggcgccgcgc
     2641 aatctccggc tcatttgcag gcgcttaaaa gtgatattac gacatttcaa cctttatgga
     2701 tcagcgatca tctgagcttc aatcaattca cccaggccgg tgcaagtggc acacccgaga
     2761 ccacttgcac cggatttttt ctacctccgg cgcaatgccg cttcggtgtc gcccaggcgg
     2821 caaagcacat aaagcgtcgc cgcacagaaa ccggagtgcc aatcgctttt gaaaatccgg
     2881 tcagttacct gccgccgcat cccggggaaa tgcaggacgg agattttgca gcggaagtcg
     2941 cggaagcggc ggattgcggc atattgctgg atcttcacaa cctgctgtgc aacgaacgca
     3001 acggtcgcca gtccgtcgcg gactattgcc ggtcaattcc attggatcgt gtgtgggaga
     3061 tccacgtagc cggtggccag tacgagcgcg gcttctggct tgacgcgcat tccggcgtcg
     3121 tcgaaccggc gttgctggag atcgtagccg aactcgtacc gcgcctgccg tcactgcgtg
     3181 cgcttatttt tgaaatcgtt cccgacttca tcgctgccac cggcctgagt gcgatctcga
     3241 catgccttgg ccaactcaat gacatctggg ctgctcgccc atccgtggtt gcgccggttg
     3301 gtcggcgccg tgtgagcgca cgcttttcgg aaacgattac acccccgctg tgggaggaca
     3361 cgatcggcgc ggccataacg ggacgcgcat ttcccgggat gcccgaggat tttgccgatt
     3421 gggcgcacgc cgccgaacaa gccttgaggc tgtatcggtt tctggcgcag gaaggtcgcg
     3481 cctgcgcgct tgtcgatacg gcgccaagaa cgatccgctc tctgttgagc acccttggcg
     3541 aggcacaaac gcgtgatttg ctcgccagct tctggatccg ttctgcacca gcctacacca
     3601 acgcgcagga agcacgggct ttcctggaat atttgagcag cgtcgatctg gccgtcccaa
     3661 acctcgcgac cgatgtcgcc aacgacaagg ccgcgctcga acagcttgcc gcacttcgtc
     3721 aatgacggcg tcgtctgaaa ccgtaaggcc gttgtttcgc ctggaggcga tgcaatctcg
     3781 ccagagtcgg atgtggtcgg gctcaccaat gcgtccgccg gtttcgctgg ccgggttcac
     3841 cgctgcgctg ttggccgccg tcgttgcaat cgccgtcttc ctgggctcgc aaagctacgc
     3901 ccgtaaagcg actgcgaccg gatatctggc accgttgcac ggcgtggttc gggtcatgcc
     3961 gcctcgcgcc g
//
LOCUS       DATAVD010000019         2272 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2794040, whole genome shotgun sequence.
ACCESSION   DATAVD010000019 DATAVD010000000
VERSION     DATAVD010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2272
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2794040"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..227
                     /locus_tag="VHX39_00310"
     CDS             <1..227
                     /locus_tag="VHX39_00310"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEX3989589.1"
                     /translation="IEAQLHGQHGSVTLVIHVGENGVATGVAVQRSSGVDMLDQAAIA
                     AVRNWRFRPAMQDGHPVPFDYPFEFIFEAH"
     gene            240..794
                     /locus_tag="VHX39_00315"
     CDS             240..794
                     /locus_tag="VHX39_00315"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HEX3989590.1"
                     /translation="MVRIDRVVTRGGDKGETSLGDNSRVSKASPRIEAIGAVDEANAS
                     IGVLRLHTRSRPTEDTMLARIQNDLFDVGADLCVPGTGNDRLRVTDAAVTRLETEVAQ
                     LNVTLPPLKSFILPGGTEAAAYAHIARVAARRAERTVVALDDANPTVQRYLNRLSDHL
                     FVLARVLNENAATDVLWEPGANRS"
     gene            862..1317
                     /locus_tag="VHX39_00320"
     CDS             862..1317
                     /locus_tag="VHX39_00320"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008854644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEX3989591.1"
                     /translation="MPQLSLHTPVGDITVFEEDDAIVSLDWGWVPGQVPSAVLERARD
                     QLQAYFDGDLTEFDLPLAPAGTTYQQAVWQALCAIPYGATCNYNDIARRAGGSPRSVG
                     QANGRNPIPLIIPCHRVVAATHIGGYSGGDGLPTKRWLLALESPHRTLL"
     gene            1343..>2272
                     /locus_tag="VHX39_00325"
     CDS             1343..>2272
                     /locus_tag="VHX39_00325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HEX3989592.1"
                     /translation="MTKAIRIHANGGPEVMVWEDVPTPEPGPGEALIKHEAIGLNFID
                     VYFRTGLYKAPNLPLIIGQEGAGTVVAIGANVTNVAVGDRVAYAGPLGGYATERAIPA
                     DRLVKLPANIGFETGAAMMLQGMTAQYLLRRTYAVKSGDTIVVHAAAGGVGLIICQWA
                     KHLGVTVIGVVSNEEKAALARANGAAHTVIGHATLVSEVKRITGGAMVPVVYDSVGKD
                     TFMASLDCLAPLGLMVSYGNASGPVGAVDIALLAAKGSLFLTRPGMATYLAKRADLVM
                     AANELFEVVQNGAVAVRVNQKFPLSAAADAHRAL"
BASE COUNT          404 a          772 c          697 g          399 t
ORIGIN      
        1 cgattgaagc ccagcttcac ggccagcatg gttccgtcac gctggtgatc catgttgggg
       61 aaaatggagt cgcgaccggc gtcgctgtgc agcgcagctc aggcgtggat atgctggatc
      121 aggcggccat cgccgccgtc cgcaattggc gcttccgccc ggcgatgcag gacggccacc
      181 ccgtcccttt cgattatccg ttcgaattca ttttcgaagc tcactgaagg aatcatctca
      241 tggtgcgtat cgatcgggtg gtgacccgcg gcggtgacaa aggcgaaaca tcccttggcg
      301 acaattcccg cgtctccaag gccagtccgc gcatcgaagc aatcggcgcc gttgatgaag
      361 ccaacgccag catcggcgta ctccgcctcc acacgcgttc ccggccgacc gaagacacga
      421 tgctcgcccg catccagaac gacctgttcg atgtcggtgc ggatctgtgc gtacccggaa
      481 ccggcaacga ccgtctgcgc gtcaccgacg ccgccgtcac ccgcctggaa accgaggtcg
      541 cacaactgaa cgtgaccctg ccgccactga aaagcttcat cctgccaggc ggcaccgaag
      601 cggctgccta cgcccatatt gcccgtgtcg ccgcccgccg ggcggagcgg accgtggtgg
      661 cgctcgacga cgccaatccg accgtccagc gctatttgaa ccggctgtcc gatcacctct
      721 tcgttctggc ccgtgtactc aacgaaaatg ccgccaccga cgtgttgtgg gaacccggcg
      781 ccaaccggtc gtgacgccgc cgcccttgac aggccggtga agccggtttc gcatccgcct
      841 cttcgatctg gaacatcgtc cgtgccgcag ctttcgcttc atacgccggt gggggatatc
      901 accgttttcg aggaagacga cgccatcgtc tcgctggact ggggctgggt gcccggccaa
      961 gtcccgtccg ccgtgctgga gcgcgcgcgc gaccagttgc aagcctattt cgacggcgat
     1021 ctgaccgagt tcgacctgcc gctcgcccct gccgggacaa cctatcaaca ggcggtctgg
     1081 caggccctat gcgccatccc atacggcgcg acctgcaact acaatgatat cgccagacgc
     1141 gccggtggca gcccccgctc cgtcggccag gcgaacggcc gtaatccaat tcctttgatc
     1201 ataccctgcc atcgcgttgt tgcggccacc cacattggcg gctactccgg cggcgacgga
     1261 ctgccgacca aacgctggct gctggctttg gaaagcccac accgcacttt gctttgaacc
     1321 actcgccgca tggggactcg acatgacaaa ggcaattcgc atccacgcca acggcggccc
     1381 ggaggtcatg gtatgggaag acgtcccgac ccccgaaccc ggtccgggcg aggcactgat
     1441 caagcatgag gcgatcggcc tcaatttcat tgacgtctat ttccgcaccg gtctgtacaa
     1501 ggccccaaac ctgcctctga tcatcgggca ggagggtgcc ggcacggtgg tggccatcgg
     1561 tgccaacgtc accaacgtcg ccgtcggcga tcgagtggcc tacgccggtc cgctgggcgg
     1621 atacgccacc gaacgggcaa tccccgccga tcgcctggtc aaactgcccg ccaacatcgg
     1681 tttcgagacg ggcgcggcga tgatgctgca gggtatgacc gcgcagtacc tgctgcgccg
     1741 cacctacgcg gtgaaatccg gcgatacgat cgtcgtgcat gctgccgccg gcggtgtcgg
     1801 gctgatcata tgccagtggg cgaaacacct gggcgtcacg gtgatcggtg tggtctccaa
     1861 cgaggaaaag gcggccctgg cccgagccaa cggcgccgcc cacacggtta tcggtcatgc
     1921 gacactggtg tccgaggtca aacgcatcac cggcggggcg atggtgcccg ttgtctacga
     1981 cagcgtcggc aaggacacgt tcatggcgag cctcgactgt ctggccccgc ttggcctgat
     2041 ggtcagttac ggcaatgcat cgggcccggt cggtgcggtg gacattgcgc tgctcgccgc
     2101 caagggcagc ctgttcctga cccgcccggg catggccacc tacctggcca agcgggccga
     2161 tcttgtgatg gccgcgaacg agctgttcga agtcgtgcag aacggcgcgg tggcggtccg
     2221 ggtcaaccag aagtttccgc tgagcgcggc agccgacgcg caccgtgccc tc
//
LOCUS       DATAVD010000020         2253 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3166702, whole genome shotgun sequence.
ACCESSION   DATAVD010000020 DATAVD010000000
VERSION     DATAVD010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3166702"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            142..981
                     /gene="sseA"
                     /locus_tag="VHX39_00330"
     CDS             142..981
                     /gene="sseA"
                     /locus_tag="VHX39_00330"
                     /EC_number="2.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004792 - thiosulfate sulfurtransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-mercaptopyruvate sulfurtransferase"
                     /protein_id="HEX3989593.1"
                     /translation="MEPLVTTEWLAGESGKSDLVIFDATKYLPNEDKDGKAEFLKAHI
                     PGARYFDIDEIADPDTSLPHMVPSPGRFEKLMAAMGVSNASRIVFYDQKGLASAARGW
                     WLMGLFGPDQAAVLDGGLPKWQREGRATNAGTPAAPAQGSFLAEFRATRLRGVGDLMG
                     NVAARSELVLDARAAGRFTGAVPEPRPGMRSGHIPGSASLPYTDLLNADGTFRSPADV
                     QARFAKAGVDGSRPVVTSCGSGVTACILTLGLRLTGLPEGAVYDGSWTEWGGRSDTPV
                     EGN"
     gene            984..2189
                     /gene="metC"
                     /locus_tag="VHX39_00335"
     CDS             984..2189
                     /gene="metC"
                     /locus_tag="VHX39_00335"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004121 - cystathionine beta-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HEX3989594.1"
                     /translation="MADAKKRGFRTTLSHTGRKTKHQHGFVNPPLQRGSTVLVPTVAE
                     RQAMQAKRGQRVLSYGLGGSETHWALEDMMAAVEGGTRCFVVCSGLAAVTTPLLAWLK
                     AGDHCLMPDHVYGPARNFANGFLKRFGVETTFYTPEIDEAGIKALMRPNTTVVYTESP
                     GSHTFEVQDIPAIARAAHAGGAKVLMDNTWGIHHFQPFRHGVDVSIQAATKYPAGHSD
                     ILIGTVTVNNDDDWATLHATARGLGQYASPDDCWLTLRGMRTLAVRLQTQMEAAILVG
                     HWLRQQPEVAQVLHPALPGAPGHALWKRDFTGACSLFGVEFRPEFSATSTHKFVEALE
                     LFGIGASWGGFESLAVPTTGSVTRTAGSGRFAGPVVRLHIGLEDVDDLTADLRHGLDV
                     MRAHRKAQV"
BASE COUNT          413 a          676 c          736 g          428 t
ORIGIN      
        1 aggttgtgaa gatcgaaaac aaaggcaagc aaaatcgccg gatcatcatc gcgccgcgaa
       61 gcccagtaca gggagcctga ttgactccag gggacaggct gcgccactcc ctcctggcat
      121 ctggaccgaa ggggaaatgc gatggaaccg ctcgtaacaa cggaatggct ggccggtgag
      181 tctggcaaat ccgacctcgt gatcttcgac gcaaccaaat atctgccaaa cgaggacaag
      241 gacggcaaag ccgaattcct gaaagcgcac attcccggcg cgcggtattt cgacatcgat
      301 gagatcgccg atccggatac cagcttgccg cacatggtgc cctcgccagg ccgctttgaa
      361 aaactgatgg cggcaatggg cgtgtcgaat gcgtctcgca tcgtgttcta cgatcagaaa
      421 ggcctcgcct cggcggcgcg tggctggtgg ctgatggggc tgttcggccc tgaccaggcg
      481 gctgttttgg atggcgggct gccgaagtgg caacgcgagg gcagggcgac caatgccgga
      541 actcccgccg cgccggccca ggggagtttt ctggcagagt tcagggcgac caggttgcgg
      601 ggcgtcggcg atctcatggg taatgtcgcg gcgcgctcgg agctggtgtt ggacgcccgc
      661 gctgccggtc gtttcaccgg tgctgtgccg gaaccgcggc ccggtatgcg gtccggccat
      721 atcccgggtt cggcttccct gccttacacc gatctgctga acgcagacgg gacgttccgt
      781 tctccggccg acgtgcaggc gcggtttgcc aaagccggcg tcgatggttc acgtccggtt
      841 gtgacgagct gtggctccgg agtgaccgcc tgcatcctga cccttggcct gcgcctcacc
      901 ggtttgcctg agggcgcggt ttacgatgga tcgtggaccg aatggggtgg ccgctccgac
      961 acgccggtgg aaggcaactg attatggccg atgcaaaaaa gcgaggcttt cgcaccaccc
     1021 tgtcgcacac cggccgcaag accaaacacc agcacggctt cgtcaatccg ccgttgcaac
     1081 gcggctccac tgtgctggtg ccgaccgtgg ccgaacggca ggccatgcag gcgaaacgtg
     1141 gccagcgtgt gctgtcctat ggtctcggag ggtccgagac gcattgggcg ctggaagaca
     1201 tgatggcagc ggtcgagggt gggacacgct gtttcgtcgt gtgctcgggt ctcgccgcgg
     1261 tgacgacgcc gttgctggcc tggttgaagg ctggcgatca ttgtctcatg ccggatcacg
     1321 tctatggtcc ggcgcggaat ttcgccaacg gtttcctgaa acgcttcggt gtcgagacga
     1381 cattctacac gccggaaatc gacgaggccg gcatcaaggc gctgatgcgg cccaacacga
     1441 ccgttgttta taccgaaagt cccggcagcc acacgttcga agtgcaggac attcccgcaa
     1501 tcgcccgggc cgcgcatgcc ggcggggcaa aagtgctgat ggataacacc tggggcatcc
     1561 atcacttcca accgttccgg cacggtgtcg atgtttccat ccaggccgcc acgaaatacc
     1621 ccgccggcca ttccgacatt ctgatcggca ctgtcacggt gaacaacgac gacgattggg
     1681 cgacgttgca tgcgacggct cgcgggcttg gccagtatgc cagcccggac gactgctggc
     1741 tcacattgcg aggcatgcgg acgctggccg tccggctgca aacccagatg gaggctgcga
     1801 tccttgtcgg ccactggctt cgccaacagc ctgaggtcgc tcaggtattg cacccggcat
     1861 tacccggcgc gccaggccat gcattgtgga agcgcgattt caccggggcg tgcagcctgt
     1921 tcggggtcga gttcaggccg gaattttccg ccaccagtac acacaagttc gttgaggcac
     1981 tggaactgtt cggtatcggc gcatcgtggg gcggcttcga aagccttgcc gtgccaacga
     2041 ccgggtccgt cacccgcacg gcagggtcgg gaagatttgc cggtcccgtg gtgcggctgc
     2101 atatcgggct ggaggatgtc gacgatctga ctgccgattt gcgccacggt ctcgatgtga
     2161 tgcgcgcgca tcgaaaagcc caggtctgat accaggagga aacaatatgc gttggctgtt
     2221 cgcggctctc gggctgcttt gcacgcttgg tct
//
LOCUS       DATAVD010000021         1936 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2608610, whole genome shotgun sequence.
ACCESSION   DATAVD010000021 DATAVD010000000
VERSION     DATAVD010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1936
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2608610"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1319)
                     /locus_tag="VHX39_00340"
     CDS             complement(<1..1319)
                     /locus_tag="VHX39_00340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HEX3989595.1"
                     /translation="MELLIDLFGYLSIIVHGLTILAQSMALGGVLFLVLLARPLLRLV
                     GTGVPRRTAALAAWSAVALAVTETMTVALQAAVLMGTLDIGIVTTLTANSALAGIVKI
                     VASAALAVLLFRRGHQAPGTALLGLCGIILVAATLTTHAAARLDDRMPLLAAAFLHQA
                     GAAIWIGGIPSFIAALAWVDDGIAWRAIGSRFSRMSMLGVACILISGIVMSLFYIGSW
                     AGFYGTAYGVMVGAKIGLFLMLLALGGLNFLSVERLRANPSTSVNRLRRCAEAEIGIG
                     IAVFFAAASLTSVPPAVDLTQDRATWADIEARNIPQWPRFSSPDHDTLAIPELQEKLD
                     AEAAHHTAQPSVAFVPGSGDLPPRNAEDIAWSEYNHHWSGLLVVAIGLLALLNQAGVG
                     WAKHWPLLFILLGVFLFFRSDPEVWPLGDIGFFASLRDIEVLQHRVFV"
     gene            complement(1324..1695)
                     /locus_tag="VHX39_00345"
     CDS             complement(1324..1695)
                     /locus_tag="VHX39_00345"
                     /inference="COORDINATES: protein motif:HMM:NF016149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance CopC family protein"
                     /protein_id="HEX3989596.1"
                     /translation="MPYRCLTRRLVLLGALTVMLLPGLAAAHAILEASEPADGARVPA
                     GPITIKLRYNSRIDRARSGLTLTRPDHSKISLPISPDGPPDLATSTVTLTPGNYVVRW
                     QVLAIDGHITRGDVAFTVTGP"
     gene            complement(1677..>1936)
                     /locus_tag="VHX39_00350"
     CDS             complement(1677..>1936)
                     /locus_tag="VHX39_00350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989597.1"
                     /translation="ETSDSRRGGRAAGGSSGGGHFALWGPLMVRCNQPDPAAAVYHDP
                     LAWLHPVTGGQQRGATHGHATDATLSGQPPTGRCPACLIDA"
BASE COUNT          415 a          639 c          601 g          281 t
ORIGIN      
        1 acgaacacgc gatgctgcaa cacctcgata tcacgcaaac tggcgaaaaa gccgatatcg
       61 ccgagcggcc agacctcggg gtcggagcgg aagaacagaa acacgccaag cagaatgaac
      121 aatagcggcc agtgtttggc ccaccctacc ccggcctggt tgagtaacgc cagcagaccg
      181 atggcgacaa ccaacaatcc ggaccagtga tgattatatt ccgaccacgc aatgtcctcg
      241 gcgttacgcg gtggcaggtc ccccgagcct gggacgaacg ccacgctcgg ttgcgccgtg
      301 tgatgcgctg cctcggcatc cagcttttcc tgcaactcgg ggatcgccaa agtgtcgtgg
      361 tccggactgc tgaatcgcgg ccattgcggg atattccgcg cctcgatgtc ggcccaggtg
      421 gcgcggtcct gcgtgaggtc gacggcaggc ggaacggagg tcagcgaggc ggcagcaaaa
      481 aacaccgcga tgccgatgcc gatctcggcc tcggcacagc ggcggaggcg attgaccgag
      541 gtagacggat tggcacgcaa ccgctccacc gacaggaagt ttaacccgcc cagagcaagc
      601 agcatgagga acaggccgat tttggcgccg accatgacgc cataggcggt gccgtagaac
      661 cccgcccaac tgccgatgta gaacaggctc atgacgatgc cgctgatcag gatgcaggcc
      721 acgccaagca tcgacatgcg tgagaatcgg ctgccgatgg cgcgccacgc gatgccgtca
      781 tcaacccatg ccagcgccgc aatgaagctg ggaattccgc cgatccagat cgctgcaccg
      841 gcctggtgca ggaacgcagc cgccagcagc ggcatccggt catccagtcg cgcagcggca
      901 tgcgtcgtca gcgtcgccgc caccaaaatt atcccgcaca atcccaacaa cgcggttccc
      961 ggggcctggt ggcctcggcg gaacagcaac acggcgagcg ccgcactcgc aacgatcttc
     1021 acgatcccgg ccagcgcaga attcgcggtc agggtcgtta caatcccaat gtcgagcgtg
     1081 cccatcaaca cggcagcctg caacgcgaca gtcattgtct cggtgactgc cagagcgaca
     1141 gcactccagg cggccagcgc ggcggtgcgg cgcggcacgc cggtaccgac caaacgcaac
     1201 agcgggcgcg ccagcagaac cagaaacagc acaccgccaa gcgccatcga ttgcgccagt
     1261 atcgtcagcc cgtggacgat gatagacaga tagccgaaca gatcgatcag taattccacg
     1321 cgatcagggg cccgtcaccg taaacgccac gtcgccgcgc gtgatgtgcc cgtcgatcgc
     1381 cagcacctgc cagcgcacga catagttgcc aggtgtcaaa gtcacagtcg aggtcgccag
     1441 atcaggaggg ccgtccggac tgatcggcaa gctgattttg ctgtggtcgg gacgggtgag
     1501 tgtcaaaccg gaccgcgcgc ggtcgattcg actgttgtag cggagcttga tcgtgatggg
     1561 accggccgga acacgcgcgc cgtccgccgg ttcgctcgct tcgaggatcg catgcgccgc
     1621 ggccagaccg ggcagtagca tcacggtcaa cgcacccagg aggaccaggc ggcgcgtcag
     1681 gcatcgataa ggcacgcagg acacctcccg gttggcggct gcccgcttaa cgtggcatcg
     1741 gtcgcgtgtc catgcgtcgc tcccctctgc tgaccgccgg tgaccggatg caaccacgcc
     1801 aacggatcgt gatagacggc ggccgccgga tcgggttgat tgcagcgaac catcagagga
     1861 ccccagagcg caaaatgacc cccgccagat gagccgcccg ccgcccggcc gccgcgccga
     1921 ctatcgctgg tttcat
//
LOCUS       DATAVD010000022         1638 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2236171, whole genome shotgun sequence.
ACCESSION   DATAVD010000022 DATAVD010000000
VERSION     DATAVD010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2236171"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="VHX39_00355"
     CDS             <1..198
                     /locus_tag="VHX39_00355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989598.1"
                     /translation="KVGDRVGGPGEVKGGRFVAKELTVMTPGNGRRRSTDNKEGSETG
                     TSETGTPENGKPSSTPAPSPK"
     gene            312..>1638
                     /locus_tag="VHX39_00360"
     CDS             312..>1638
                     /locus_tag="VHX39_00360"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX3989599.1"
                     /translation="MAGLVPLSAQTGAPAPAHPGATTTQPVTPAAGSPTPSGSAAETV
                     PQAPAPQGGTIRGTVIAGSPGKPGGVPLPGVAVTATNTLTGKKYAAATSIDGTYAMKI
                     PHNGRYVVRAELAGFAPVTQEVVLSASDATVGAALVKTSDFGMQLASRVAAAEAKQEA
                     ATNATSVGRGTQNLSLNAGATDVTDASAANGNSDVAMPTLGNLSQTGTNEASQSSESI
                     AVSGQTGQTNGLANFSEDEIRQRVQDAVDQARGSGQLPEGADPTNRIVAVIGGMMGGS
                     GGPGGGGRGGFRGGRGGGGGGFGAFRNFNPAQPHGNIFYQGSNNALDSASWSPDGPVV
                     QPAGYQNRFGASIAGSPYIPGLTKPNTKQFAFLNISGQRNLNAFIETGRVPTALERQG
                     DFSQSFLQSGGTTAAVQLFDPVTGQPIAGENLKNASVPVSLQALALLNYF"
BASE COUNT          325 a          497 c          558 g          258 t
ORIGIN      
        1 aaggttgggg accgggtggg cggaccaggc gaggttaagg gcggacgctt cgtggccaag
       61 gaactgacgg tgatgacgcc gggaaacggg cgccgccgct caactgataa caaggaaggt
      121 tcggagacgg gcacttcgga gaccggaacg ccggagaatg gcaagccttc ttcgactcca
      181 gcgccatcgc ccaagtaatc acagtaagcg gctgcgcggc gcgttcgacg cggcggccgg
      241 gaatgtttcc gaagagccgg aaggaggagt tggtgaggct gagggtgagt gggtggggtg
      301 tgttcttatg catggcggga cttgtgccgt tgagcgcgca gacgggcgcg cctgcaccgg
      361 cccaccccgg cgcgacgacg acgcagccgg tgacccctgc cgcgggatcg ccgaccccct
      421 cggggtccgc agccgagacg gttcctcaag ccccggcgcc tcaaggtgga acaatccgcg
      481 gcactgtgat agccggatcg cctggtaaac cgggcggcgt cccgctgccg ggcgttgcgg
      541 tgaccgcgac gaacaccctg actggcaaga aatacgcggc agcgaccagc attgacggta
      601 cctacgccat gaagattccg cacaacggcc gctatgtggt gcgggccgaa ctggccgggt
      661 tcgcgccggt tacgcaggag gtcgtgctga gtgcgagcga tgcgacggtc ggcgccgcgc
      721 tggtcaagac ctccgatttc gggatgcagt tggccagccg cgtcgcagcc gccgaagcga
      781 agcaggaggc cgcaaccaac gcgacgtccg tcggccgcgg aacgcagaac ctcagcctga
      841 acgctggcgc aaccgatgtt acggacgcga gcgcggccaa cggcaacagc gacgtcgcaa
      901 tgccgacgct tggcaacctg tcgcagaccg gcaccaacga ggccagccaa agcagcgaat
      961 ccatcgcggt cagcggacag acgggtcaga ccaacgggct tgcaaatttc agtgaggacg
     1021 agatccgtca gcgcgtgcag gatgcggtcg atcaggctcg cggcagcggt cagctgccgg
     1081 agggcgcgga tccaaccaac cgcatcgtgg cagtcatcgg cggcatgatg ggtggctccg
     1141 gcggccccgg tggtggcgga cgcggcggat tccgcggcgg gagaggcggt ggcgggggcg
     1201 gttttggcgc cttccgaaac ttcaatcccg cgcagccgca cggcaacatc ttttaccagg
     1261 gcagcaacaa cgcgctggac tctgcctcgt ggtcgcccga cgggccggtt gtgcaacccg
     1321 ctggatatca gaatcgattc ggcgccagca tcgcaggcag tccttatatt cccggcctga
     1381 cgaagccgaa cacaaagcaa tttgcatttc taaacatcag tggccaacgc aatttgaacg
     1441 cctttatcga aaccggccgc gtcccgaccg ctttagagcg ccagggcgat ttctcgcagt
     1501 cgtttctcca gagtggggga acaacggctg ccgtgcagct ttttgatccc gttacaggac
     1561 aaccgattgc gggagaaaac cttaagaatg ccagtgtgcc cgtctcgcta caggcattgg
     1621 ctttgctcaa ttactttc
//
LOCUS       DATAVD010000023         2009 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3166826, whole genome shotgun sequence.
ACCESSION   DATAVD010000023 DATAVD010000000
VERSION     DATAVD010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3166826"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(123..584)
                     /locus_tag="VHX39_00365"
     CDS             complement(123..584)
                     /locus_tag="VHX39_00365"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3989600.1"
                     /translation="MMPTIQDEPELLFEPFPSDDLRRFVEDNVATFTMAMTGALDYQP
                     VGYFLRQERGEWVGGCLGHVWANYLHVQWLWVAASLRGRGHGAKLLRAAEIMAVENGA
                     ARATLDTFNPAAKAFYLRQGYEVFGTLPDYPPGYSKFFLRKMLFGPGSVPA"
     gene            complement(712..1398)
                     /locus_tag="VHX39_00370"
     CDS             complement(712..1398)
                     /locus_tag="VHX39_00370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3989601.1"
                     /translation="MPVALVTGGARGIGAAIAARLQHNGWDVVVADRDPAPIGRSVIC
                     DVSDEAAVATLIDGIRTTECRLDALICNAGFGIRKPVEQLSLAEWSSVLGTNLTSIFL
                     LVRAAVSLLRTAHGSIVTIASTRAHMSEPNTEAYSASKGGIVALTHALAISLGPDVRV
                     NCISPGWILTKGPEPTEPEHAFHPAGRVGTPEDIAALAAFLVGPDSGFITGSEFIVDG
                     GVTRKMIYPE"
     gene            complement(1398..>2009)
                     /locus_tag="VHX39_00375"
     CDS             complement(1398..>2009)
                     /locus_tag="VHX39_00375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989602.1"
                     /translation="MYVSPSSLAAYLPVYERSLRSALQRIVEAIPHADLSIQWDVCQE
                     VLVFEQFFPHRPPTYKADIFADLARLADAVPADVECGYHLCYGSPRDAHLVMPKDTAI
                     LVEISNGLIDRLSRRLDFLHLPVPQDRSDAAYYAPLRDLRLPAATTLYLGLIDDAIGD
                     QARITAAAAVVPAFGIATECGWGRSDPEKIPDLLAAHRHAMGH"
BASE COUNT          421 a          615 c          625 g          348 t
ORIGIN      
        1 cggcgccgac ctgacccggc gggaggtcga ttggctcgtg cgtaccgaat gggccagaac
       61 cgccgaggat attttgtggc gccgaagcaa gctgggactg cgctttactc cggcagaggt
      121 ggttatgctg gaacgctacc tgggccaaat agcatcttcc tgagaaagaa cttgctgtag
      181 cccggcgggt aatctggtag cgtgccgaag acctcgtagc cctggcgcag gtagaatgct
      241 ttagcagcgg ggttgaacgt gtcgagggtc gccctcgccg ccccattttc caccgccatt
      301 atttccgccg cacgcaacag cttggcgccg tggccgcgac cacgcaacga cgcggcgacc
      361 cacagccact gcacgtgcag gtaattcgcc catacgtggc ccagacagcc gccgacccat
      421 tcgccacgct cctggcgcag aaaataccca accggctggt agtccagcgc acccgtcatc
      481 gccatggtga aggttgcgac gttgtcctcg acaaagcgac gcagatcgtc ggagggaaat
      541 ggctcgaaga gaagctccgg ctcgtcctgg attgtcggca tcattcgcac tccttggtcc
      601 ggtggcgact ggcgccgctg ctggctggca gccgtaaagg ccacccggca taggaaagca
      661 agtgccggtc gggatttgac attctggaca gggctgccga ggcagcggaa atcattccgg
      721 atagatcatc tttcgggtca cgccgccgtc gacaatgaac tccgacccgg tgatgaaacc
      781 gctgtcgggg ccgaccagaa acgctgccag cgccgcgatg tcttctggtg tgccaactct
      841 tccggcggga tgaaatgcgt gctccggttc ggtcggttcc ggaccctttg tcaaaatcca
      901 tccgggactg atacaattca cccgcacgtc aggcccgaga ctgatggcca atgcatgggt
      961 cagcgccaca ataccacctt tggacgcaga gtaagcctcg gtattcggct cagacatatg
     1021 agcgcgagtg gacgcgatgg tgacgatcga tccatgcgct gtccgtaaca acgacacggc
     1081 ggcgcggacc aggaggaaga tgctggtcag attggtccca agcaccgatg accattcagc
     1141 cagcgacaac tgctcgaccg gcttacggat gccgaaaccg gcgttgcaaa tcagcgcatc
     1201 gaggcgacat tcggtcgtgc gaataccgtc gatcagtgtc gcgacggctg cctcgtcaga
     1261 tacatcgcag atgaccgaac gcccgatcgg tgcgggatcg cgatcggcta cgacgacatc
     1321 ccaaccgttg tgttgcaagc gcgccgcgat ggctgcgcca atccctcgtg cgccgcccgt
     1381 gaccagggca accggcatca gtgccccatc gcgtgccggt gcgcggcgag cagatcgggg
     1441 attttttcgg gatcgctgcg tccccagccg cactcggttg cgatcccgaa tgcggggacg
     1501 acagcggcag ccgctgtgat gcgagcctga tcgccaatgg cgtcatcgat cagaccaaga
     1561 tacaacgtcg tggcggccgg caaacgcagg tcacgcagcg gcgcgtaata agcggcgtcc
     1621 gagcgatcct gaggcaccgg caaatgcagg aagtccagcc gccgactgag ccgatcgatc
     1681 aggccgttgg agatttccac caggatcgca gtgtccttcg gcatgaccaa atgcgcatca
     1741 cgcggcgagc cataacagag gtgatagccg cactcgacat ctgccgggac agcatcggcc
     1801 agtcgggcga ggtcggcgaa aatgtcggcc ttgtaggtcg gtggacgatg cgggaagaat
     1861 tgttcgaaaa ccagcacttc ctggcagacg tcccactgga tcgacagatc agcgtgcggg
     1921 attgcctcga caatccgctg cagcgcactc cgcaatgaac gctcgtagac cgggagatag
     1981 gcggccaacg acgacgggct gacatacat
//
LOCUS       DATAVD010000024         3746 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2236316, whole genome shotgun sequence.
ACCESSION   DATAVD010000024 DATAVD010000000
VERSION     DATAVD010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3746
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2236316"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..444)
                     /locus_tag="VHX39_00380"
     CDS             complement(<1..444)
                     /locus_tag="VHX39_00380"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3989603.1"
                     /translation="MPAAVGNELIALYNAGNWSQLVTAADRVIARFPRNPFGWRASGK
                     ALLQLGRLPEAIEKLSKVVKLAPADADAFNDLGSALFDSGRAEEAVVSYRRSVELNPR
                     GTEAYANLGRVLCTLGRFEEAAAWCRQAIEVDPRAAVAHNNLGNAL"
     gene            complement(659..1921)
                     /locus_tag="VHX39_00385"
     CDS             complement(659..1921)
                     /locus_tag="VHX39_00385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989604.1"
                     /translation="MAVDPHTGLNKYLCPELPTPELTCVSSCTASPISHQGLDQATAA
                     FLNISDARSPEQRARRLTVLSESIKARLLQYFGVGSLAHAILCPSGTHAMLTAAMLIA
                     AEQPGEAMTAILPSARETGTGVPTAAVCRVFDGPDTGRPLSNCDWTAVEIPLRSADGS
                     PRSEDAVTDAFAGAAAVVTGKVVVYLTHGTKTGLIAPMSPPPGADVIVDACQGRIAPE
                     TVATYLSRGWPVVVTGSKFFGGPAFSGAVLFPLARSPTIAQGILPTALGDAADLGTLL
                     RWTAALPTIEAFERRAPEMAGVLSRRIATVERALTSNPALVPIDGLRPNGSGWADQPS
                     IFTFAVRDPMDRARLLSVAELRPLYERLARLGALFGQPVDLGGFGGLRVAIGAQTLLD
                     GSGDGDLAGVFAILERAASPASGIGTER"
     gene            complement(2457..3326)
                     /gene="asd"
                     /locus_tag="VHX39_00390"
     CDS             complement(2457..3326)
                     /gene="asd"
                     /locus_tag="VHX39_00390"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00163.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaetidylserine decarboxylase"
                     /protein_id="HEX3989605.1"
                     /translation="MTLRSTIMNIVQQDDINFLLTNRVPRRLLTRFMGWFSRIEQPLV
                     RDLSLRTWQFFSGLELSEAKQTSFRSVHDCFTRELKSGVRPVEMDPDVLVSPCDGIVG
                     ASGRVEDGKVLQVKGFSYALHDLLGDAGHAAEFHDGCYVTLRLTSAMYHRFHAPHDCR
                     VDSVSHFPGDTWNVNPVALRRVERLYCKNERAVIRTRLSRTGHALTMVPVAAILVAGI
                     RLRFLDLVRSPETGCRRTFPCDVSLQKGEEMGWFEHGSTIVLLAQSGFRFCDGVNEGM
                     TVRVGQGLLRPAA"
     gene            complement(3546..>3746)
                     /locus_tag="VHX39_00395"
     CDS             complement(3546..>3746)
                     /locus_tag="VHX39_00395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989606.1"
                     /translation="GLLFRTVQLFFIRDMVTGLAWMTKILTDPFNDARLYCRAPLQLM
                     RGGLIASSLTADDELEPVEFPQ"
BASE COUNT          793 a         1164 c         1110 g          679 t
ORIGIN      
        1 caacgcattc ccgagattgt tgtgagcgac agcagcccgg ggatcgacct cgattgcctg
       61 tcggcaccag gcagcggcct cctcaaaacg gccaagagtg cagagtactc ggcccaggtt
      121 ggcgtaggct tcggtgcctc gtggatttaa ttcgacggag cggcgatagc ttaccactgc
      181 ctcctcagcg cggccgctat caaaaagggc actaccgaga tcgttgaaag catcggcgtc
      241 agccggcgcg agcttcacaa cttttgacag cttctcgatg gcctctggca gcctgccaag
      301 ctgcaatagt gctttgccgg acgctcgcca gccgaacggg tttctgggga agcgtgcaat
      361 gacccggtcg gcggcagtta ccaattgaga ccagttgccc gcattataca gagcgatcaa
      421 ttcgttgccg accgcggcag gcatctcgcg cgccccattc ctcatgttat cgtctcctgg
      481 aaccacggtg cctgggtcgc gaaattgtcg tggggcgaac cgacctgggc ttttgcggcg
      541 cctgtcacgt accagccgac acgaccgctc gatgcggagc aatcaccggc aacgactggt
      601 tggcggctga ttggttgcct tgcagcagga gacatagcca acggcctggt catgccagct
      661 accgttccgt gccgatgccg gacgctggtg aggcggcgcg ctccaatatc gcgaagacac
      721 ctgccaggtc gccatcgccg gatccatcca gcagagtctg agcgccgatc gcgacccgca
      781 ggccaccgaa accacccaga tcaacaggct ggccaaacaa cgcccccagg cgtgcaagcc
      841 gttcatacag tggacgcagt tccgcaaccg aaagcaaccg cgcgcgatcc atcggatcac
      901 gtactgcgaa agtgaaaatg ctgggttggt cagcccaccc ggaaccattc ggtcgaagcc
      961 cgtcgatcgg aaccagggca ggattggaag taagcgcacg ttcgaccgtc gcgatacgtc
     1021 tggaaaggac gcctgccatt tccggagcgc gacgctcgaa tgcctcaatg gtagggaggg
     1081 ccgctgtcca gcgaagcaat gtccccaggt cggctgcatc gcccaacgcg gtcggcagga
     1141 ttccctgtgc aattgtgggc gaccgggcca agggaaacag cacggcgccg gagaatgccg
     1201 ggccaccaaa gaactttgat cccgtcacga caacaggcca gccgcgactt aagtacgtcg
     1261 cgacggtttc gggcgcaata cggccttggc aggcgtcaac gatgacatcc gctcctggcg
     1321 gtggcgacat tggcgcaatc agtccggtct tcgtgccatg ggtgaggtag acaacgacct
     1381 ttcccgtcac gactgccgca gcaccagcga acgcgtcagt caccgcgtcc tcggaccgag
     1441 gcgatccatc ggccgatcgc aaagggatct ccaccgcggt ccaatcgcag ttggacaacg
     1501 gacggccagt atcgggtccg tcaaatacgc gacacaccgc tgccgtcggt acgccggttc
     1561 cggtttcgcg ggccgaggga aggattgccg tcattgcctc gcccggctgt tccgcggcga
     1621 tgagcatcgc agccgtcaac atcgcatgcg tgccggacgg gcacaggatc gcatgcgcca
     1681 atgagcccac accaaaatat tgcagtagcc tcgctttaat cgactcgctt agaacagtga
     1741 gtcggcgggc gcgttgctcg ggcgatcgcg catcggaaat attcagaaac gcggcagtgg
     1801 cctgatcgag gccttgatgc gaaatcggcg atgcggtgca tgacgagaca catgtcaact
     1861 ccggcgtcgg tagctcgggg cagaggtatt tgttgagacc agtatgcgga tcaaccgcca
     1921 tgcggcgatc gccccccgaa tataaggcgg caatgaaacc tctgggtggg tcaggtgtac
     1981 ggtccagccg gcggaggtct ctgtccgtca caggttgaag ttgcacgctc aacatccatc
     2041 cagcccttct gttttcgagg tggctcgatt gcagccctta acgttcggtt ttcgattgcg
     2101 attttggctc aaggggcgag gcgcggctca ggcagcgttc cgcagctctt cgcatgggcc
     2161 atggactggc cggcaacctc ctgacaccac aaagccaaac gccggaatgg ctgccccaat
     2221 gatgccgggc aaaagttagt aatctcctaa aatcctggga caatccggcg ggcctccccg
     2281 cgcggtcatc agagcggccg ggcccgagac cgccaacact ccgcttcgat gtgtcgagcc
     2341 accgggtata ttgatgatag gtcgccgcat ccgatcgcgt gcggcgccag gcgcatgatc
     2401 tcgtgtatcg cagcagctaa acactggccg ctgatcatgg tgccaaagtg gtggcgtcat
     2461 gccgcgggtc gcagcagccc ctgaccgacg cggaccgtca tgccttcatt cacgccgtcg
     2521 caaaatcgaa aacccgactg ggctaacagg acaatggtag atccgtgctc aaaccatccc
     2581 atctcttcgc ctttttgcaa cgacacgtcg cacggaaagg ttcgtcggca gcccgtctct
     2641 gggcttcgca ccaggtccag aaagcgcagc cggatgccgg ccaccaggat cgccgccaca
     2701 ggtaccatgg tcagtgcatg accggtgcgg gaaagtcggg tcctgatcac ggcccgctcg
     2761 ttcttgcagt acagtcgctc gacccgtcgc agcgcgaccg gattgacatt ccaggtgtcg
     2821 ccagggaagt gcgaaaccga atcaacccgg cagtcatgcg gggcgtgaaa gcggtgatac
     2881 atggcggaag tcaaccggag tgtcacataa cacccgtcat gaaactccgc cgcatggcca
     2941 gcatcgccga gcagatcgtg aagtgcgtag gaaaacccct tgacctgaag gaccttgccg
     3001 tcctccaccc tgcccgacgc gccaacgatc ccatcgcaag gactgacaag gacgtcaggg
     3061 tccatttcga ccgggcgcac tccggatttc aactctcggg tgaaacaatc atgcacactg
     3121 cggaaactgg tttgtttcgc ctcactgagt tcgaggccag agaagaactg ccacgtgcgc
     3181 agcgacagat cgcgtaccaa cggctgctcg atccggctga accagcccat gaacctggtc
     3241 agcaaccggc gcggaacgcg gttcgtcagc aggaagttta tgtcgtcctg ctgcacaata
     3301 ttcataatgg tcgaacgcag ggtcatttgg tccgtgaccg ggctataccg gatgtattta
     3361 aacccaccgc cgatttcaga gcgatcattg gccgacgccc gctcttgcgc ggtcccagtg
     3421 aggcgatcta tctggtttgg cacggcataa atgcagttag atcgcccccg ctgacctacg
     3481 gtgacagcgg gccgaaggtc agaataagtg ccgagccgcg ctaccccgcg cgatctcccg
     3541 gcggttcatt gcgggaactc cacgggttcc agttcatcgt cggccgtcaa actactggca
     3601 atcaacccac cgcgcataag ttgcagcggg gctcggcaat aaagccttgc gtcgttgaac
     3661 ggatccgtga ggatcttcgt catccaggca aggccggtca ccatgtccct gatgaagaac
     3721 aattgcacgg tgcgaaacag cagccc
//
LOCUS       DATAVD010000025         2930 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3167082, whole genome shotgun sequence.
ACCESSION   DATAVD010000025 DATAVD010000000
VERSION     DATAVD010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2930
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3167082"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(270..2378)
                     /locus_tag="VHX39_00400"
     CDS             complement(270..2378)
                     /locus_tag="VHX39_00400"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HEX3989607.1"
                     /translation="MSAAQLLIIVCGLAALVYGFITSRQVLAADAGTARMQEISAAVQ
                     EGARAYLNRQYTTIGLVGVVILIFLGLVLGIHTAIGFLIGAVLSGAAGFIGMNVSVRA
                     NVRTAQASRQGLAAGLDVAFKAGAITGMLVVGLGLLGVAGYYFVLRGGVSGPMTDDQL
                     RKVLEAMVALGFGGSLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIA
                     DNVGDNVGDCAGMAADLFETYAVTIVATMLLAGIFFTGAVRDAMLMLPLGICAICILT
                     SIVGTYFVKLGPDAGIMWALYKGLLVTGGLSVVGIAVIILLTCGFATPLSLTGGGTVD
                     GWDLLVCAIAGLVVTGLIVVITEYYTSTEYRPVKSIAQSSTTGHGTNVIQGLAISMEA
                     TALPVIVISVGIIFTYMVAGLFGIAVAATTMLSLAGMIVALDAYGPVTDNAGGIAEMA
                     DLPPEVRVTTDALDAVGNTTKAVTKGYAIGSAGLASLVLFAAYTQDLTHYFPSLHVDF
                     ALQNPFVVIGLFIGGMLPYLFGAMGMTAVGRAAGSVVVEVRRQFREIPGIMEGTAKPE
                     YGKAVDMLTRAAIKEMLVPSLLPIGAPIVLWIVIDVVAGRSAAFASLGAMLLGTIVTG
                     LFVAISMTSGGGAWDNAKKYIEEGNHGGKGSDAHKAAVTGDTVGDPYKDTAGPAVNPM
                     IKITNIVALLMLAVLAGWLR"
     gene            complement(2629..>2930)
                     /locus_tag="VHX39_00405"
     CDS             complement(2629..>2930)
                     /locus_tag="VHX39_00405"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3989608.1"
                     /translation="IVALAKAFSDRGITDGVQVNSVLPGPVMTGRRRSYLEHWASIHG
                     MTAEQATVKFPQEAGIARYGEPEEIAELMAFLVSPGARWMTGSVLRMDGGEVKSV"
BASE COUNT          574 a         1082 c          808 g          466 t
ORIGIN      
        1 ccctgccgtt cgccgaccat gcggtgctgg aggcgctcga ttcattcgaa cgcgcggtgt
       61 accagtcgat cgactagtgc ccgatcacgg tagggcgcga gtcacgaagt gaccgcgatt
      121 tcccgcgtga atcggtcact cagacaaatc tgcgacgtat cgcgcttctc tgaggcgcga
      181 taccagccga cccggcaaaa acccggcaca taaagcaacg gccccgaggt caccctcggg
      241 gccgtttcct cattccacgt tgaaccgtcc taccgcagcc aacccgccag caccgccagc
      301 atcagcagcg ccacgatgtt ggtgatcttg atcatcgggt tcaccgccgg cccggcggta
      361 tccttgtacg gatcgcccac ggtatcgccg gtcaccgccg ccttatgcgc gtcggagccc
      421 ttcccaccgt gattcccctc ctcgatatat ttcttcgcgt tgtcccacgc gccgccgccc
      481 gaggtcatcg aaatcgccac gaacagaccc gtcacgatcg ttcccagcag catcgccccc
      541 agcgaggcaa acgccgccga ccgcccggca acgacatcga tcacgatcca cagcacgatc
      601 ggtgccccga tcggcagcag cgacggcacc agcatctcct tgatcgccgc tcgggtcagc
      661 atgtcgaccg ccttgccgta ttccggcttg gctgtcccct ccatgatgcc cgggatctcc
      721 cggaactgcc gccgcacttc caccacgacc gacccggccg cgcgccccac cgccgtcatg
      781 cccatcgcac cgaacaggta tggcagcatg ccgccaatga acaacccgat caccacgaac
      841 gggttctgca acgcgaaatc gacgtgcagc gacggaaagt aatgcgtcag gtcctgggtg
      901 taggcagcga acagcaccag tgatgccagc cccgccgatc cgatcgcata ccccttggtc
      961 accgccttcg ttgtgttgcc gaccgcgtcc agcgcatccg tggtcacccg cacttccgga
     1021 ggcaggtctg ccatctcggc gatgccgccg gcgttgtcgg tcaccggacc atacgcgtcc
     1081 agcgccacga tcatgccggc cagcgacagc atcgtcgtcg ccgccaccgc gatgccgaac
     1141 agaccggcca ccatgtaggt gaagatgatg ccgacactga tcacgatcac cggcagcgcc
     1201 gttgcctcca tggagatcgc caacccctgg atcacgttgg tgccgtgacc ggtggtggaa
     1261 ctttgcgcga tcgacttcac cggacggtat tcggtggagg tataatactc ggtgatcacc
     1321 acgatcagcc cggtcaccac caggccggca atggcacaca ccaacaggtc ccacccgtcc
     1381 accgttccgc cgcccgtcag gctcaacggt gtcgcgaagc cgcaggtcag cagaatgatg
     1441 acggcaatgc ccaccaccga caggccaccg gtcaccagca gccccttgta gagcgcccac
     1501 atgatccccg catccggccc cagcttgacg aaataggtgc cgacgatcga ggtcaggatg
     1561 cagatcgcac agatgcccag cggcagcatc agcatcgcgt cgcgtaccgc gccggtgaag
     1621 aagatccccg ccagcagcat ggtcgcgacg atggtcacgg cataggtctc gaacaaatcc
     1681 gctgccatac cggcgcagtc gccgacgttg tcgcccacgt tgtcggcgat cacggccgga
     1741 ttgcgggggt catcctcagg gatgccggcc tcgaccttgc ccaccagatc ggcgcccacg
     1801 tcggcgccct tggtgaagat gccgccgccc agacgcgcga agatggaaat cagcgacccg
     1861 ccgaagccca gcgccaccat cgcctccagc accttgcgaa gctggtcgtc ggtcatcggt
     1921 ccgctcacgc cgccacgcag cacgaaataa taaccggcga cgcccagcag gcccaacccg
     1981 acaaccagca tcccggtgat cgcacctgcc ttgaacgcga catcgagccc ggccgccagc
     2041 ccctggcgcg acgcctgtgc ggtacgcacg ttggctcgca ccgagacgtt catgccgatg
     2101 aacccggccg cccccgacag cacggcgccg atcaggaacc cgattgccgt atggataccc
     2161 aggaccaggc ccaggaagat cagaatgacc acgccgacca ggccgatcgt ggtgtattgc
     2221 cggttcaggt aggctcgcgc cccttcctga acggccgccg agatctcctg catgcgggcc
     2281 gttccggcat ccgcggcaag gacctgccgg ctggtgatga aaccatagac cagggccgcc
     2341 aggccgcaga ctatgatcag cagttgcgcc gcactcatta gggttttccc ctccatcgtt
     2401 tgtttcgttc tggcgcaacc gccgaatcgg acacaggcgg cgccgtggcc gcggcgtatg
     2461 ccagaacccg gcgcatccgg caaatagccg gttaacttct gtttatttta acgggtcgga
     2521 tccgccacct gaacgccatg gcaaccacga ccccgaacaa gaaaaccgcg acgacccggc
     2581 aacggcggat catcgcggtt cggcgtcagc ctacgcggcc aagacccgtt acaccgactt
     2641 gacttcgcca ccatccattc gcagcaccga tcccgtcatc cagcgagcac ccggcgacac
     2701 caggaacgcc atcagttcgg cgatctcctc tggttcgcca taacgcgcga taccggcctc
     2761 ctgcgggaat ttcaccgtcg cctgctccgc cgtcatccca tggatcgacg cccagtgctc
     2821 cagataggac cgccgccgcc ctgtcatcac cggccccggc agcacactgt tcacctgcac
     2881 cccatcggtg atgccgcggt cagagaacgc cttcgccaac gccacgatcg
//
LOCUS       DATAVD010000026         3693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2980357, whole genome shotgun sequence.
ACCESSION   DATAVD010000026 DATAVD010000000
VERSION     DATAVD010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3693
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2980357"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VHX39_00410"
     CDS             <1..184
                     /locus_tag="VHX39_00410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3989609.1"
                     /translation="PGVIRYRKGDHELMPNIFVGHAHPPQGNPDNVFSVESLVPGETA
                     AGSVEATGCKMVAPPV"
     gene            263..1132
                     /locus_tag="VHX39_00415"
     CDS             263..1132
                     /locus_tag="VHX39_00415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011930591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3989610.1"
                     /translation="MLQVILFNVTNGLIIGAFYVLMALGLSLILNLSNVINFAHGNFL
                     ALGGYFAFMLTPLIGFWGALLVAPLATALLGFIVERLMIRRVYTRDPVYSLLLTFGLA
                     FIMQDLCRYIWGPNGLPLGVPDAMSAPVSDQLFFITWYRIFNVSVVIIAVAALFAFLR
                     FTRVGVRIRAGTLDLETVSALGVNVSMLRSFNFGLGCLLAGVAGVLAAGQIGLNPNMG
                     DDLLMPSFIAIIVGGVGSLTGTLIGGLLIGVAAALTTIVWPSASEAVIYVIMAVVLVL
                     RPRGLMGEEGMLT"
     gene            1129..2115
                     /locus_tag="VHX39_00420"
     CDS             1129..2115
                     /locus_tag="VHX39_00420"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3989611.1"
                     /translation="MNSATTAALGARLPADRRWLQLLAIWAVLLAVPFWLPLLGGYTA
                     LAGRVLVLGLAAMSFNILLGFTGVMSFGHAAYFGLGAYGAGLTLKFLAASTPLAMLMG
                     VLLGGGLGALFGLLIVRRRGVYFAMVTVAFGQVAFYVAYSWNDLTGGYDGLRGFTREP
                     LHLGLATIDIANNSTAFYYFLLFVFAVAVGLQALLLASPFGRTLLAIRENERRARFLG
                     IPIERHIWLSFTISCCFTALAGSLYALLNNFADPMGLHYSLSGEIVIMTVMGGMRAFW
                     GPLLGAAVFVVLQDYISSMTVNWMSFIGLIFVLVVLFFPRGLLGVLQRRDAA"
     gene            2112..2864
                     /locus_tag="VHX39_00425"
     CDS             2112..2864
                     /locus_tag="VHX39_00425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3989612.1"
                     /translation="MSNMLEVRAVSKHFGSLRAVDDVTLMVAPGELRAIIGPNGAGKT
                     TFFNLISGFFPPTTGEIVFDGEVITQLPVAARVARGMARTFQITEIFPELTVRENVRI
                     GAESASGLRLALWRSRADAARVEATIDEMLTLTGLTVQADRLVGEMSHGDQRAAEIAM
                     ALTLKPRLLLLDEPTAGMGEHETYQIAGLIRRLHRNSNYTIVLIEHDMRVVFNLADRI
                     TVLDQGKLLADGTPKEIADNPHVQEAYLGSAT"
     gene            2861..3601
                     /locus_tag="VHX39_00430"
     CDS             2861..3601
                     /locus_tag="VHX39_00430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011930594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3989613.1"
                     /translation="MSALQAEGLNTYYGKSHILHDIGLVVEEGRVTTLLGRNGAGKTT
                     TLRSLVGLTPPRTGHVRVFGQETTGLAPFRVARMGVGYVPEGRRIFPNLTVEENLQVP
                     SGRVGPFTIPRVYELFPRLQERRSNRGRQLSGGEQEMLSIARALLLNPRLLILDEPSQ
                     GLAPLIVREVFRIVAQMRAEGISILLVEQNVRMSLEITDDVYVIENGQMVYSGPAAEF
                     GADEERIQALAGASAEEWNLDEILPHEA"
BASE COUNT          608 a         1046 c         1173 g          866 t
ORIGIN      
        1 gcctggtgtg atccgttacc gcaagggcga ccacgagctg atgcccaaca tctttgttgg
       61 tcacgcacat ccgccgcagg gcaaccctga caatgtgttt tcggtcgaat ccctggttcc
      121 gggcgagacg gccgccggtt cagttgaggc cacgggctgc aagatggtag caccgccggt
      181 gtaacaatcg cctgccggcc gccgccccgc cgtttgccag acggcggggt gtttgcgtac
      241 aacacccgag gaaaagcgcc ccatgctgca agtcattctg ttcaatgtaa ccaatggcct
      301 catcatcggt gcattctatg tgctgatggc actcggcctg tcgctgatcc tgaacctcag
      361 caatgtcatc aacttcgcgc atggcaattt tttggcgctc ggcggttact ttgccttcat
      421 gcttaccccg ttgatcgggt tctggggcgc gctattggtg gcaccgctgg ccaccgcgct
      481 tctgggcttt atcgtcgagc ggctgatgat ccgccgggtt tatacccgcg accctgtcta
      541 tagtttgctg ctgacctttg gccttgcatt catcatgcag gatctctgcc gttacatttg
      601 gggaccaaac ggcctgccac ttggcgtgcc ggacgcaatg tccgcgccgg tgagcgacca
      661 gctgttcttc atcacctggt atcgcatctt caacgtgtcc gtcgtcatca tcgcagtcgc
      721 cgcattgttt gcgttccttc gctttacccg cgttggcgtc cgcattcgcg caggcacgct
      781 ggacctcgag acggtgtccg ccctcggggt caacgtctcc atgcttcgtt ccttcaattt
      841 cgggcttggt tgtttgctgg ccggcgtcgc cggcgtgctg gccgccggac agatcggcct
      901 caatccgaac atgggcgatg acctgctgat gcccagtttc atcgccatca tcgtcggcgg
      961 tgtcgggagc ctgaccggca cgctgatcgg cggcctgttg atcggcgttg cggcggcctt
     1021 gaccaccatc gtttggccgt cggcgagcga ggcggtgatc tacgtcatca tggccgttgt
     1081 tctggtgctg cgcccgcgcg gcctgatggg cgaagaggga atgttgacat gaacagcgcc
     1141 accacagcgg ccctcggcgc ccgcctgccg gccgaccggc gctggctcca actgttggcg
     1201 atctgggctg tgctgctggc agtgccgttc tggctgccac tgctcggcgg ttataccgca
     1261 ctcgcgggcc gcgtgctggt gcttggtttg gcggcaatgt cgttcaacat cttgcttggc
     1321 ttcaccggcg tgatgagttt tgggcacgcg gcttatttcg gtctgggcgc ttacggcgca
     1381 ggcctgacat tgaaattcct cgccgcctcc accccgctgg cgatgttgat gggggttttg
     1441 ctcggcggtg gactgggtgc actgttcggc ctgctgatcg tgcgccggcg aggggtctat
     1501 ttcgccatgg tcacggtcgc gtttggccag gtcgctttct acgtcgctta cagttggaac
     1561 gatctgaccg gcggttatga cgggctacga ggcttcacgc gcgagccgtt gcatctcggc
     1621 ctggccacca tcgacatcgc caacaacagc acggcgttct attacttcct gctgttcgtg
     1681 tttgcggtag cggttggatt gcaggcattg ctgcttgcct cgccgtttgg ccgtacgctg
     1741 ctggcaattc gggaaaatga acggcgggca cgcttcctcg gcattccgat tgagcggcat
     1801 atctggttgt cgttcaccat ctcctgttgc ttcaccgcat tggccggttc gctttatgct
     1861 ttactgaaca atttcgcgga tccaatgggc ctgcattatt cgttgtccgg tgagatcgtg
     1921 atcatgaccg tgatgggcgg catgcgcgcg ttctggggac cgttgctcgg cgcggcagtg
     1981 tttgtcgtgc tgcaggacta catttcttcc atgacggtga actggatgag tttcatcgga
     2041 ttgattttcg tccttgtcgt gctgttcttc ccgcgcggcc tgttgggcgt gctgcaaagg
     2101 agggatgccg catgagcaac atgttggaag tgcgcgccgt gtcgaagcat ttcggcagcc
     2161 tgcgcgcagt cgacgatgtt actttgatgg tggcaccggg cgagttgcgt gcgatcattg
     2221 gcccgaacgg ggcgggcaag accacgttct tcaacctgat ttctgggttc ttcccgccta
     2281 ccaccgggga aatcgtcttc gatggggaag tgatcacgca attgccggtc gcagcgcggg
     2341 tcgctcgcgg catggcgcgt acatttcaga ttaccgagat tttccccgaa ctgaccgtgc
     2401 gagagaacgt gcgcattggc gccgagagcg cgtccggctt gcgcctggcg ttgtggcgga
     2461 gtcgcgctga tgccgcacgg gttgaggcta caattgatga gatgctgacg ctgaccgggc
     2521 tgaccgtgca ggctgaccgg ctggtgggag aaatgtcgca tggcgatcaa cgtgcagcgg
     2581 agatcgcgat ggcattaacc ttgaagccac gattattgct gctggatgag ccgaccgcag
     2641 gtatgggcga gcacgaaacg taccaaattg cagggttgat tcgtcgtctt caccgcaaca
     2701 gcaactacac cattgtcttg atcgaacatg acatgcgggt ggtgttcaac ctcgccgacc
     2761 ggatcaccgt gctcgatcaa ggcaagttgc tggcagacgg cacgccgaag gagatcgccg
     2821 acaatccaca cgtccaggaa gcctatctgg ggtcagcaac atgagtgcac tccaggcaga
     2881 agggctcaac acctattatg gaaagagcca catcctgcac gatatcggtc ttgtggttga
     2941 ggaaggccgt gttacgacgc tgctaggccg caacggtgcc ggtaaaacca ccacgttacg
     3001 cagcctggtt gggctgacgc cgccgcgtac tggtcatgtt cgcgtgttcg ggcaggagac
     3061 caccggattg gcgccgtttc gtgttgctag gatgggcgtg ggctacgtgc cggaggggcg
     3121 tcgaattttc cccaatctga ccgtcgagga aaacctgcag gttccgtccg gacgcgtcgg
     3181 gccgtttaca ataccgcggg tctacgagtt gtttcctcgg ctacaggaac ggcgcagcaa
     3241 tcgcgggagg caactctctg gcggcgagca ggaaatgctg tcgatcgcgc gcgcattgtt
     3301 gttgaaccca cgcctgctga tcctggacga accgtcccag gggctggccc ctttgatcgt
     3361 gcgcgaggtt ttccgaattg tcgcacagat gcgcgccgag gggatttcga ttttgttggt
     3421 agagcagaat gttcgtatga gcctggaaat caccgacgat gtctatgtca tcgagaacgg
     3481 tcagatggtg tattccggac cagccgcaga atttggtgcc gatgaggaac ggatccaggc
     3541 gctggctggc gcctcggcgg aggagtggaa cctcgatgag atcctgccgc acgaggcgta
     3601 gtcgggttta cttcggtctg gccgtcgttg tggtggcgga cggcgggagt gacacgggca
     3661 ggtaggtatc ggtccgagca gtctgctttg ggt
//
LOCUS       DATAVD010000027         7302 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_748402, whole genome shotgun sequence.
ACCESSION   DATAVD010000027 DATAVD010000000
VERSION     DATAVD010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7302
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_748402"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2022
                     /locus_tag="VHX39_00435"
     CDS             <1..2022
                     /locus_tag="VHX39_00435"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX3989614.1"
                     /translation="APNGSFDRVLMYSIETSQLSGLSPTISALNGCVTLLTDDDVILA
                     RSPEVRGTVGIRMMPIELSEIRKSQSGTGRQISRIDGVDRIFAYRHLADLPVTLIVGI
                     GHDAIFTDWKTLRFTVMTGRVLATVFILVIAIFWYRRRHRATISGDALTAILSSIESG
                     IRVESRDGVIIAANEAGADLRMPDRASRQAEVRRADGSMIQVVRRDLDDGGTVLIGTD
                     VTARHEAEERIEFLTNHDNLTGLPNRWRAATNIQELLAAKFGSSRVSALILFDLDGFQ
                     DVNNTLGHEGGDIILIEIAHRLRDLVSGRDIVARLGGDEFMLFLDDPGDEATIMSLAR
                     QVPRSLARPIAVRGQHVRLGASLGIALYPRDGEDVTTLFRHADIALSRAKLAGRGTAQ
                     SFDPEMMVSFEEGRMVESDLRRALDSDELELRLQPQFSCETLEVTGFEALTRWRHPTR
                     GMLSPAVFIPIAERSGLINPLGLWAIEQACKAAMTWPTRHRVAVNLSPSQLRCETIQD
                     DIRAILRRTQFPAHWLELEVTESVLLDEDQRTLETLHKLRAMDIRVTLDDFGTGYSSL
                     SYLRRFPFDKIKIDKSFIQGQGSDRSTKVILEAMIRMCTDLGLDVVAEGVETELQLNE
                     LRQLGCREIQGFLLAEPLLPAMIEKFLIEHGRRFGTKSVQDAAAANAST"
     gene            complement(2175..2939)
                     /locus_tag="VHX39_00440"
     CDS             complement(2175..2939)
                     /locus_tag="VHX39_00440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016738658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIM24 family protein"
                     /protein_id="HEX3989615.1"
                     /translation="MRSQITGSILPVLEIGLDPGEMVVAPSGEFAWMTPNVRMNTTTA
                     AAGSSGFLGALTRAVAGGGLFMTEFMADGPGGVAFTPKIPGQIVPVEVQPGRGFMIHR
                     HGFLCATQGAQLTAALQRSLGAGAFGGEGFVLQHLAGPCQAWVALGGEIVASELQPGE
                     TLLVHPGHVGMFEDSVRFDITTISGIKNALFGGDGIFLVQLTGPGKVWLQTMTLPSLA
                     NALGPYMSNAGGANTAQTVEAGAAGAILSSIFGGNR"
     gene            complement(3188..3904)
                     /locus_tag="VHX39_00445"
     CDS             complement(3188..3904)
                     /locus_tag="VHX39_00445"
                     /inference="COORDINATES: protein motif:HMM:TIGR02595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-CTERM sorting domain-containing protein"
                     /protein_id="HEX3989616.1"
                     /translation="MKRLYCAWPRAVLGSAVVTAVLALNCATASAGLTITDTSAADKK
                     TITDTGGCANGGCIPLGTTGYVVDSTAPSLVAAPGVYKFTYLGAGNSVDDNKFTVAGG
                     GTFCTQAFKGCNGGVQTPIGTSFTVTLTAGEIPFVFTAGPNGPGGCVLTDGSTANALP
                     YGGCADYFVALSNSTANPGLTGPAESSAYIGLTDLPFPCDNDFQDLDVLVQQIPEPAT
                     LAVLGFGLMGVLGLRKHRET"
     gene            4249..6249
                     /locus_tag="VHX39_00450"
     CDS             4249..6249
                     /locus_tag="VHX39_00450"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3989617.1"
                     /translation="MQNDLDDRQWADNLDYLGLDRGQAEALQRHKPAISNAIAGILVE
                     FYARTAKYPPLRGLFADATSMARAKQGQIAHWNQLFDGKFDSAYRDSAIRIGKVHHRI
                     GLASRDYIAGYGYILGELLQALILPRRSWWPFRSGRRELANTAAAAVRAALLDMGVVM
                     QTYRDAADAERTQLVEAMLKSIDTETLDATHGVAALTADLARSAHRVDAANGAMSKDT
                     GAAVLAANGALASAQTVATAAEQLHVSIEEIGGQVAQSAASARAAVQRMQSAQTVVRR
                     LAEAAEEIGKVVSLISDIAGQTNLLALNATIEAARAGESGRGFAVVANEVKSLASQSA
                     HSAEEITGRIATIQLVSGETAQTIEEIAVAISAMEQSATVIASAMQQQTAATGEIARS
                     VGETAGHAREVNRHMESVQAGATAARAAASLVGDSAGRVDATMATLGRLLTKAVHTAS
                     SISNRRADPRRAVLLDAELLIDGRSEKGQVFDLSQRGAMVACTADVNSGTILTLVIQS
                     EGIRGEATVVAAFDGFLHLHLSSVALPARQVEQVAHNSLPRLVETTKNDHRMFVQRIL
                     EAVAGKTHIEPSTLATHHQCRLGRWCDSISDDLLTGLPAFKALHEPHQRVHQSGRAVL
                     EAVQSGRPDDVVTAVAQLEAASHEVLELLDRFGDSSRQRLAA"
     gene            6411..>7302
                     /gene="gpmI"
                     /locus_tag="VHX39_00455"
     CDS             6411..>7302
                     /gene="gpmI"
                     /locus_tag="VHX39_00455"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HEX3989618.1"
                     /translation="MPAKPVMLVILDGFGWREATEDNAVRLARMPNFKALWTSSPHAF
                     LHTSGRDVGLPDGQMGNSEVGHLTIGAGRVIRQELVRIGDAVADGSIATLPAFAKLVD
                     ALQRTGGTCHLMGLVSPGGVHSHQDHAAGLAQHLTKAGVRTVLHAFTDGRDTPPQSAG
                     EYLSALRAALPTQVKIATVTGRYYAMDRDKRWDRVAQAYAALTAAKGAHFADPEAAIK
                     AAYDAGKFDEFIPASIIGDYAGMKDGDAILCFNFRADRVREILAALLDPGFDGFARES
                     TFKFAATVGMTRYSDALAPFM"
BASE COUNT         1447 a         2214 c         2303 g         1338 t
ORIGIN      
        1 gcacccaatg ggtcgtttga ccgcgtactt atgtattcaa ttgagaccag ccagctttcc
       61 ggtctttcgc cgaccatcag cgctctcaac ggctgcgtaa cgttgctgac cgacgacgac
      121 gtgatcctgg cacgttcccc ggaggtgcgg ggcacggttg gcatccggat gatgccaatc
      181 gagctgtctg aaatacgcaa aagccaatcc ggaaccggcc ggcaaatcag tcggatcgat
      241 ggcgtcgaca ggattttcgc ctatcgccat ttggctgacc tgccggtcac attgatcgtt
      301 gggattggcc atgacgccat attcaccgac tggaaaacgc tgcggttcac ggtaatgacc
      361 ggccgcgtgc tggcgactgt tttcattctg gttattgcga ttttctggta tcggcggcgc
      421 catcgggcga caatatcggg tgacgcactg acagcaattc tgagcagtat cgaaagtggt
      481 atccgtgttg aaagtcgcga cggcgttatc atcgcggcca atgaggccgg tgcggacttg
      541 cgcatgccgg accgcgcgag ccggcaagcc gaggtgcgac gcgcggacgg cagcatgatc
      601 caggtggtac gccgtgatct cgatgacggt ggaaccgtgc tgatcggcac ggacgtcacc
      661 gcccgtcacg aggcggagga acgtattgag ttcctgacca accacgacaa tctgacgggc
      721 ctgccaaatc gctggcgggc ggccacgaac attcaggaat tgcttgccgc aaaattcggc
      781 tccagccgcg tgtccgcact tattttgttc gatctggatg gcttccagga cgtcaacaac
      841 accctcgggc atgagggagg cgacataatc ctgatcgaga ttgcgcatcg gttgcgcgat
      901 ctggtgtccg gccgcgacat cgtggcccgc ctcggcggcg atgaattcat gctgttcctg
      961 gatgatccgg gcgatgaggc aacgatcatg agtctggccc gtcaggtgcc acgctcgctg
     1021 gcgcggccga ttgcggtacg cggccaacat gttcgtctcg gcgccagcct gggcattgcc
     1081 ctctacccgc gcgatggtga ggacgtaacg accttgttcc ggcatgccga tattgccctg
     1141 agccgtgcga aattggccgg ccgcggcacg gcacaaagtt tcgaccctga gatgatggtg
     1201 tcattcgaag aaggccgcat ggtggaaagc gatttgcgcc gtgcactcga cagcgacgag
     1261 ctggagttgc gcctgcaacc acaattctct tgcgaaacgc tcgaagtcac cggatttgag
     1321 gcgctcacgc gctggcggca tccgacacga ggcatgttgt ctcccgccgt gtttattccg
     1381 atcgccgagc ggtccggcct gatcaatccg cttggactat gggcgatcga acaggcctgc
     1441 aaggccgcca tgacctggcc gacccggcat cgcgttgcgg tcaatctttc gccgtcacaa
     1501 ttgcgctgcg aaacgatcca ggacgatata cgggcaattc ttcgccgtac ccagtttccg
     1561 gcgcattggc tggaactcga ggttaccgaa agtgtgctgc tggatgagga ccagcgcacc
     1621 ctggaaacgt tgcataaact gcgcgcgatg gacatcaggg tcacgcttga cgatttcggt
     1681 accggatact ccagcctgag ttatttgcgc cgcttcccat tcgataagat caagatcgac
     1741 aagtcgttca ttcaggggca gggcagcgat cgcagcacca aggtcatcct ggaagccatg
     1801 atccggatgt gtaccgacct cgggctcgac gtcgttgcgg aaggcgtcga aaccgagctg
     1861 cagttgaacg aattgcggca attgggctgc cgcgagattc agggtttcct gttggcggaa
     1921 ccactgcttc cggcgatgat cgagaagttt ctgattgaac atggacgccg tttcggaacg
     1981 aaatcagtac aagacgcggc ggcagccaac gccagcacct gatcgccgga tccgcgtatc
     2041 cgatccgccg atgtcgcgaa aaataaccat attcgaacag gccggccggc caggttcgat
     2101 cgcggccaga ccggcgaacg cccgatgcat tgtcccgagg tcacaacagc ccctgggaga
     2161 cgaccgccga cgcgtcagcg attgccaccg aagatgctgc tgaggatcgc gccggcagca
     2221 ccagcttcga ccgtctgtgc cgtattggcg ccgcctgcat tgctcatata gggacccagc
     2281 gcattcgcga ggctgggcaa ggtcatggtc tgcagccaaa ctttccccgg cccagtgagt
     2341 tgcaccagaa aaatcccgtc cccgccgaac agcgcgtttt tgatgccgct gatggtcgtg
     2401 atatcgaaac ggacgctgtc ttcgaacatg cccacatggc cgggatggac caacaatgtt
     2461 tcgcccggct gcagctcgct ggcaacgatt tcgccgccga gtgcaaccca ggcctggcat
     2521 ggcccggcga gatgttgcag cacgaagccc tcgccgccga acgcccccgc acccagagaa
     2581 cgttgcagtg ccgcggttaa ttgcgcgcct tgcgtcgcgc acagaaatcc gtggcggtgg
     2641 atcatgaagc cgcggccggg ttgaacctct acaggaacga tctggcccgg gattttcggg
     2701 gtaaaggcaa caccacctgg accatcggcc atgaactcgg tcatgaacag accaccgcct
     2761 gccacggcgc gggtcagcgc tcccaggaac ccggaggagc cggcggccgc agtggtcgtg
     2821 ttcatgcgca cgttgggcgt catccatgca aactcgcccg acggagccac caccatttcg
     2881 ccgggatcga gtccgatttc cagaacaggc aggatgctgc cggtgatttg cgagcgcatg
     2941 gattcggtta ctcctcttgc cgctctgtcg tcgccgcaca gacgagggtg cggtagccac
     3001 gatggctgac ataaccatta agaaccaggc tgtcttacgc cgggatgact ggcgccagga
     3061 tgacgcgcgg agcgcatccc gctcagcccg acaagcgtag cacccacgga agccgggagg
     3121 catcgaaatc ggcattcgcg cggtggacga tgcgccggga acggacatcc ggccctggcg
     3181 gtaagcatca ggtttcccga tgctttctca ggcccagcac gcccatcagg ccaaagccca
     3241 gtacggcgag cgtggcaggc tccgggattt gttggaccag gacatccagg tcctggaagt
     3301 cgttatcaca ggggaacgga aggtcggtca gccctatgta ggcggacgat tccgccggtc
     3361 cggtcagccc agggttcgcg gtgctgttgg agagagcaac gaagtaatcg gcacaaccgc
     3421 cgtacggcag ggcgttcgcg gtcgaaccgt ccgtaagcac gcaacctcct ggtccgttcg
     3481 ggccggcggt gaaaacgaat gggatctcgc ctgcggtcag ggtgacggtg aaggacgttc
     3541 cgattggcgt ctgcacgcct ccattacaac ctttgaacgc ctgggtgcag aatgtgccac
     3601 ctccggcgac ggtgaactta ttgtcgtcga ccgagttgcc ggcgcccaga taggtgaact
     3661 tgtagacgcc cggcgctgcg acgaggctcg gggctgtgct gtctacgaca tagccggtgg
     3721 taccaagcgg gatacagcca ccgttcgcac aaccgcccgt atcggtgatg gtttttttgt
     3781 ccgcggccga cgtgtcggta atggtcaggc cggcgctggc cgtggcgcaa ttcaaagcca
     3841 gaactgcggt gacaaccgct gatccgagca cagcccgcgg ccatgcgcag tacaatcgtt
     3901 tcatgagaaa atactccggc ttccgagcga ccgcactgtg gcgtctgcat gcgttattca
     3961 gcgaatggcg caatgcccct acgatcgtag gtgagtctcc cggctgaaag acactctcga
     4021 actccatttt caaaatagta gattaatgga gaaatatcaa gtttaattca aaacacggcg
     4081 tccctttttg gtacggatct gcgccgatat taacaatact atcgcaaccc gcagcgcccg
     4141 ttgcttcgcc acgcaaaggc ggcggtgaaa cctgcccggc gtataagcca tttcctaacg
     4201 attttgcccg atgctcccgg tgcgatccaa tgacaggagt cgggccctat gcaaaacgac
     4261 ctcgatgatc ggcaatgggc cgacaacctc gattacctgg gcctcgaccg aggtcaggcc
     4321 gaagctctgc agcggcataa gccggcaatc agcaatgcca tcgccggcat cctcgtggaa
     4381 ttctacgcca ggacggcaaa atatccgcca ttgcgcggat tgtttgccga tgcgaccagc
     4441 atggcgagag ccaaacaagg tcaaatcgcg cattggaacc agctgttcga tgggaaattc
     4501 gacagcgcat atcgcgatag cgccatccgc atcggcaagg tgcatcaccg tatcggcctc
     4561 gcgtcgcgcg actacatcgc cggctatggc tacattcttg gcgagctgtt gcaggcgctg
     4621 atcctgccgc ggcgcagttg gtggccgttc cgctccgggc ggcgagaatt ggccaatacg
     4681 gccgcggccg ccgtgcgagc cgcactgctg gacatgggcg tcgtcatgca gacgtaccgg
     4741 gatgcggccg atgcggaacg cacgcagctg gtcgaggcca tgttgaaaag tatcgacacc
     4801 gagacgttgg atgcgaccca cggggtggcc gcgctcaccg ctgatctggc ccgcagtgcg
     4861 caccgggtgg acgcggcaaa cggcgccatg tcgaaggaca caggggccgc cgtcctggca
     4921 gcaaatggcg cgctcgcctc agcccagacc gttgcgacgg cagccgagca gctgcatgtc
     4981 tcgattgaag agatcggcgg gcaggtcgcg cagtcggcgg cgtccgcacg cgctgccgtg
     5041 cagcggatgc agtcagccca gactgtcgtg cggcggctgg ccgaagcagc tgaggaaatc
     5101 ggcaaggtgg tcagcctgat cagcgatatc gcaggccaga ccaacctgct cgccctcaat
     5161 gccacaatcg aggcagcgcg cgccggcgag tcggggcgag gcttcgctgt cgtcgccaac
     5221 gaggtgaaga gcctcgccag ccagtcagcc cattcggcag aggagatcac cgggcgtatc
     5281 gccaccattc agctcgtgtc cggcgaaacc gcgcaaacca tcgaggagat cgcggtcgcc
     5341 atcagtgcga tggagcagag cgccacggtg attgcctcgg cgatgcaaca acaaaccgcc
     5401 gcgaccggag agatcgcccg ttcggtgggc gaaaccgcag gccatgcgcg ggaagtcaac
     5461 cggcacatgg aatcggttca ggctggagcg acggcggctc gtgcggcagc gtcgctggtc
     5521 ggcgacagcg ccggccgcgt tgatgcgacc atggcgactc tgggccgctt gctgaccaag
     5581 gcggtgcata cggcgtcttc gatttccaac cgtcgtgccg acccgcggcg ggccgtgctg
     5641 ctggatgctg agctgctgat cgacggccgc agtgagaaag ggcaggtgtt cgacctgtcg
     5701 cagcgcggcg ccatggttgc atgcacggcg gacgtcaaca gcggaactat cctgactctg
     5761 gtgatccaat ccgaagggat ccgaggcgag gcgacagtgg ttgccgcgtt cgacggcttc
     5821 ctacatctgc acctgtccag cgtcgcattg ccggccagac aagtggagca ggttgcgcac
     5881 aacagtctgc cgcgacttgt cgagacgacc aagaacgatc accgcatgtt cgtgcaacga
     5941 attctcgagg ccgtggccgg caagacgcac atcgagccat cgactttggc cacacaccat
     6001 caatgccggc tgggccgctg gtgcgacagc atctcggacg acctgttgac cgggctgccc
     6061 gccttcaagg cactgcatga gccgcatcag cgggtgcatc agagcgggcg ggcggtcctt
     6121 gaagccgtgc aatccggccg cccggatgat gtggtcacag cggtcgcgca attggaggca
     6181 gcgtcgcacg aggttctgga actactcgac cggtttggcg attcttcgag gcagcggttg
     6241 gcggcgtaac cagcatgggt gctgctgcgt gggtgaaacc atgttagtat agagaacctg
     6301 cgctgcgctg gatgccgact gagtggctgt cgtcggcgtc gcggcgcctg accaaaccgg
     6361 aagacctcac ccggggcaaa catccccgca caagacggag cgtgacgaca atgcctgcga
     6421 aacccgtgat gctggtgatc ctcgacggtt tcggctggcg cgaggcgacc gaagacaacg
     6481 ccgtccgcct ggcccggatg ccgaatttca aagcgctgtg gaccagctct ccacatgcct
     6541 tcctgcacac ctcggggcgc gatgttggct tgccggatgg acaaatgggc aattccgagg
     6601 tcggccatct gaccatcggt gccggacggg tgatcaggca ggaactggtg cgcattggtg
     6661 acgcggtcgc cgacggttcg atcgccacgc tgccggcctt cgcaaagctc gtcgatgcgt
     6721 tgcaacgaac cggcggcacc tgccatttga tggggcttgt ctcccccggc ggcgtgcact
     6781 cgcaccagga tcacgcggcg ggcctcgcgc agcatctgac caaggcgggg gtcaggaccg
     6841 ttttgcatgc gtttaccgat gggcgcgata cgccgccaca gtccgccggc gaatacctca
     6901 gcgctttgcg cgccgcgctg cctacgcagg tcaaaatcgc caccgtgaca ggccgctatt
     6961 acgcgatgga ccgcgacaaa cggtgggacc gagtcgcgca ggcctacgcg gcgctgaccg
     7021 cggccaaggg cgcgcatttc gccgacccgg aagcggcgat caaggcggca tatgacgcgg
     7081 gaaaattcga tgagttcatt cctgcgtcga tcattggcga ttacgccggc atgaaggacg
     7141 gcgatgcgat tctgtgcttc aatttccgcg ccgaccgggt gcgggagatc ctggccgcac
     7201 tgcttgatcc ggggttcgac ggattcgccc gggagtcgac gtttaaattt gccgcgacgg
     7261 taggcatgac acgttattcc gatgccctcg cgccgttcat ga
//
LOCUS       DATAVD010000028         1752 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1305922, whole genome shotgun sequence.
ACCESSION   DATAVD010000028 DATAVD010000000
VERSION     DATAVD010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1305922"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1338
                     /locus_tag="VHX39_00460"
     CDS             <1..1338
                     /locus_tag="VHX39_00460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016913619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HEX3989619.1"
                     /translation="PSVDEWLPERHLARIVVEVIAGLDLRAMTGDYRGSGEASYHPSV
                     LPGLLVYGYATGVFSSRKLERATFDSVALRFIAANRHPDHDTIASFRRRFLKQIEALF
                     VQVLVMAREMGMLKLGTVALDGTKVHANASRHSALSYERAGQIEMQLREEVAKLTAMA
                     EAADQADVPDGMSVPEELARREKRLAEIARARAIIEARAKERYAREKAEHEAKMAARA
                     AKSAETGKKPGGRPPAPPVEAPGPADQVNLTDEESRIMPTAAGGFEQCYNAQAVVAAD
                     SLLVVTGDVVQAANDKQPVQPMLEELAALPGELGKAETLLADTGYFSETNVDACAATG
                     IDPLIAHGRQSHYPPLSERTAADPPAPENSTPAEAMAHRLQTKAGKALYALRKQIPEP
                     VFGIIKSVMGFRQFSLRGLAKVRGEWKLVTMAWNIRARGKITTSSVSLSSGVE"
     gene            complement(1321..>1752)
                     /locus_tag="VHX39_00465"
     CDS             complement(1321..>1752)
                     /locus_tag="VHX39_00465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012474914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
                     /protein_id="HEX3989620.1"
                     /translation="ELGQSRYPHAKRLLITADCGGSNGVRVRLWKWELQKLANETGVA
                     ITVAHLPPGTSKWNRIEHRLFAFITQNWRGKPLVSYQVIVQLIGATTTKTGLSVACRI
                     DDNLYPKGVTVSDDEIDALNLRCDKFHGEWNYTISPSLDSG"
BASE COUNT          336 a          517 c          585 g          314 t
ORIGIN      
        1 ccgtcggtgg atgaatggtt gccggagcgg cacctggcgc ggatcgtggt cgaggtgatt
       61 gcggggcttg atctgcgggc gatgaccggc gactaccgcg gttctgggga ggcctcctat
      121 caccccagcg ttctaccggg gctgctggtc tacggttatg ccacgggtgt gttttccagc
      181 cggaaactgg agcgggcgac ctttgattcg gtcgcccttc gcttcatcgc cgccaaccgg
      241 caccccgacc acgacacgat cgccagcttc cgtcggcgct tcctcaaaca gatcgaggcg
      301 ctgttcgtgc aggtgctggt catggcgcgc gagatgggga tgctgaagtt gggtacggtg
      361 gcgctggatg gcaccaaagt ccacgccaac gcgagccgcc atagcgcact gtcctatgaa
      421 cgggccggtc agatcgagat gcagctgcgc gaggaggtcg ccaagctcac cgcgatggca
      481 gaagcggccg atcaagccga tgtgccggat gggatgtcag ttcccgagga gctggcgcgg
      541 cgggaaaagc gcctggccga gatcgctcgg gcacgcgcga tcatcgaggc gcgggcgaag
      601 gagcgctacg cacgcgagaa agccgagcat gaggccaaga tggcagcgcg cgcagccaaa
      661 agtgcagaga ccggcaagaa gccgggaggc cggccgccgg caccgcctgt agaagcaccg
      721 ggccctgcgg atcaggtcaa tctgacagac gaggaatcgc ggatcatgcc gaccgccgct
      781 ggcgggttcg agcagtgcta caacgcgcag gcggtggtgg ccgcagacag tcttttggta
      841 gtcaccggcg atgtcgtgca ggcggccaac gacaagcaac cagtacagcc gatgctggag
      901 gagcttgccg cactgcccgg cgaacttggt aaggccgaga ctttgctggc cgatactgga
      961 tatttcagcg agacgaatgt cgatgcgtgc gccgccacgg ggatcgatcc gctgatcgcg
     1021 cacggccggc agagccatta cccgccgctt tcggaacgca ccgccgccga tccgccggcg
     1081 ccagaaaatt cgacgccggc cgaggcgatg gctcatcgtc tgcagaccaa agccggcaag
     1141 gccctctatg cgctgcgcaa gcagataccg gaaccggtgt tcggcatcat caaatcggtg
     1201 atgggtttcc ggcaattctc gctgcgtggc ctggcgaaag ttcggggtga atggaaactt
     1261 gtcaccatgg cctggaacat aagggctcgg ggcaaaatta ccacgtcatc agtttcgctc
     1321 tcatccggag tcgagtgacg gagagattgt ataattccat tcgccgtgga atttgtcgca
     1381 cctcaggttg agggcgtcga tctcgtcatc gctgacggtc acgcccttcg gatagaggtt
     1441 gtcatcgatg cggcaggcaa cgctcaatcc agtcttggtg gtcgtggcgc cgatcagttg
     1501 cacgatcacc tgatagctga ccaacggctt gccgcgccag ttctgggtga tgaaggcgaa
     1561 taaccggtgc tcgatccggt tccacttgct ggtgccaggg ggcagatgtg ccacggtgat
     1621 cgccacgccg gtctcattgg ccagcttctg caactcccac ttccacagcc ggacacggac
     1681 gccgttgctg ccgccgcagt cagccgtgat gagcaggcgt tttgcatgtg gatagcgcga
     1741 ctggccaagt tc
//
LOCUS       DATAVD010000029         2435 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1864479, whole genome shotgun sequence.
ACCESSION   DATAVD010000029 DATAVD010000000
VERSION     DATAVD010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1864479"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            170..1618
                     /gene="glgA"
                     /locus_tag="VHX39_00470"
     CDS             170..1618
                     /gene="glgA"
                     /locus_tag="VHX39_00470"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HEX3989621.1"
                     /translation="MNVLSVASEVFPLVKTGGLADVIGALPPALAEQGISVRTLVPGY
                     PAVTEAIEAVQTVHSDTDWFGGAARLLTGRAGGLDLLVLDAPHLYARQGNPYFGPDGR
                     DWPDNAIRFAALSHMAADICGGVMQGYAPDVLHVHDWQTGLAPAYLHYRGGARPGTVM
                     TVHNLAFPGKAPRNLLGALDLPPQSFAIDGVEFYGTIGLLKAGLQFADRITTVSPTYA
                     AEICTADAGMGFDGLLRTRSSVLSGILNGVDTEVWDPATDLSLAARFDRTTLAKRVAN
                     KAALQARLGLEQDAAAPLFGVVSRLTWQKGADLVLACLPVLQALDAKLALVGTGDAGI
                     ESGLRFAAAQAPNRIGCVIGYDEGLAHLVQAGADALLVPSRFEPCGLTQLCALRYGAV
                     PVVSRVGGLADTVIDANAAALAAGVATGVQFSPVNAGMLDMALRRTVALFREPSLWHS
                     LQENGMATDVSWRGPARKYAALYRDLVEARSR"
     gene            1668..>2435
                     /locus_tag="VHX39_00475"
     CDS             1668..>2435
                     /locus_tag="VHX39_00475"
                     /inference="COORDINATES: protein motif:HMM:NF014919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching enzyme GlgX"
                     /protein_id="HEX3989622.1"
                     /translation="MTSRWPSDGEPETLGVSLIGDGVNVAVFSANATAIEFCLFEGDR
                     EIRRVRLRGRTGDVFHDHVPEVVAGARYGLRAHGPYRPADGHRFNPAKLLLDPYATVI
                     DRPFELHASMFDYRAGSAETNLSPDDTDSAPFMPKGVVSGSGVAQEVAPPITAWSDTV
                     LYELHVRGFTMGHTDIPQSLRGRFAGLAHPAAIEHLLRLGVTTVEIMPAAAWIAERHL
                     VALGLRNYWGYNPVTCMAPDPRLAPDGWQEIRAAVSAL"
BASE COUNT          397 a          706 c          805 g          527 t
ORIGIN      
        1 gcagttcggc acacctgcgc aaggtcatca tcgaacgcgg tgtacacatc ccggctggtc
       61 tggtggttgg ccaggacccg gtgctcgatg gtcagcggtt tcggcgcacg gccaatggtg
      121 tttgtctgat cacccagacc atgatcgacc agcttcgtta atgcagcatc tgaacgtgtt
      181 gtcggtggca tcagaggtgt tccctctggt gaaaactggc gggctggccg acgtcattgg
      241 cgcattgcct cccgcactgg ccgagcaagg aatcagtgtc cgaacccttg taccgggcta
      301 tcccgccgtt accgaagcga tcgaggcggt gcaaacggtt catagtgaca ccgattggtt
      361 tggcggcgcg gcgcgtttgt tgaccggacg tgctggcggt ctggatttgc ttgtactcga
      421 cgcaccgcat ttgtacgctc gccagggtaa tccttatttc ggcccggatg ggcgggactg
      481 gcctgacaac gccattcggt ttgccgcttt gtcgcatatg gcagcggata tctgtggcgg
      541 cgtaatgcaa ggctacgcgc cggacgtcct gcacgtgcat gactggcaga ccggtttggc
      601 acctgcctat ttgcactatc ggggcggtgc ccgaccgggc actgtgatga ctgtgcataa
      661 cctcgccttt ccgggcaagg cgccgcgcaa tctactgggc gctctggact tgccgccgca
      721 gtcttttgcg atcgatggcg tggagtttta tggcaccatc ggtttactta aggccggcct
      781 gcagtttgcc gaccggatta ctacggtatc gccgacctat gcggcagaga tatgcacggc
      841 tgatgccggc atgggttttg atggtttgtt gcgaactcga tccagcgtac tgtcgggcat
      901 tctgaacggc gtcgataccg aggtctggga tccggccacc gacctctcac tcgcggcgcg
      961 cttcgatcgc acgaccctgg cgaagcgggt tgcaaataag gctgcgctgc aggcacggct
     1021 cggcctggag caggacgcag cggcaccgtt gttcggtgtg gtcagcaggt tgacctggca
     1081 gaaaggagcg gacctggtcc tggcctgtct gccggtgttg caggcactcg atgcgaaact
     1141 cgcgctggtg ggaaccgggg acgcgggcat tgagtccggg ctgcggttcg cggcggcgca
     1201 ggcgccaaac cgaatcggct gtgtcatcgg ctatgatgag ggactggctc acctcgtgca
     1261 ggccggagcg gacgccttgc tggtaccttc acgtttcgaa ccctgcggcc tgacccagtt
     1321 atgcgcgtta cgttatggcg ccgtacctgt ggtctcgcgc gtcggtggcc tcgccgacac
     1381 ggtgatcgat gccaatgccg cggcgctggc agccggtgtc gcgaccgggg tgcagtttag
     1441 tccggtgaac gcgggaatgt tggatatggc tctacggcgt accgtggcgt tgtttcgcga
     1501 gccgtccctt tggcacagtt tgcaggagaa cggcatggcg accgacgttt cctggcgcgg
     1561 tcctgcccgc aagtacgccg cgctgtatcg cgacctggtg gaagcgcggt cccgatgacg
     1621 cgccaatgga aacaaccggc gtcggcaagg ccgggggagc agcggacatg acatcccggt
     1681 ggccgtcgga cggtgaaccg gaaaccctgg gcgttagctt aatcggcgac ggggtgaatg
     1741 tcgctgtctt ctccgccaac gcgacggcta ttgaattctg cctgtttgag ggtgaccggg
     1801 agatccgccg cgtgcgattg cgcggccgca caggcgacgt ctttcatgat catgtccccg
     1861 aggtcgttgc gggtgcgcgc tatggcttgc gggcgcatgg tccgtatcgt cccgctgacg
     1921 gacatcggtt caatccggcc aagctgctgc ttgatcctta tgccacagtg atcgatcgcc
     1981 cgttcgagtt gcatgcttca atgttcgact atcgtgctgg ctcggcggag acgaacctgt
     2041 ctcctgacga taccgacagt gcacctttta tgcccaaggg tgtcgtttca ggatcaggtg
     2101 ttgcccagga agtggcaccg ccgataacgg cgtggtccga tacggtgctg tacgaattgc
     2161 atgtgcgcgg ctttacgatg ggccacaccg acattccgca gtcgttgcgc ggccgtttcg
     2221 ccggtctcgc gcacccagcc gccatcgagc atttgcttcg ccttggcgtc acgacggtgg
     2281 aaatcatgcc agcggcggcc tggatcgcgg aacgccattt ggtagcgttg ggactgcgga
     2341 actattgggg ctacaacccg gtgacctgca tggcacccga tcctcgactg gctccggatg
     2401 gttggcagga gatccgtgcc gcagtcagtg cactc
//
LOCUS       DATAVD010000030         2018 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2981128, whole genome shotgun sequence.
ACCESSION   DATAVD010000030 DATAVD010000000
VERSION     DATAVD010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2981128"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            128..529
                     /locus_tag="VHX39_00480"
     CDS             128..529
                     /locus_tag="VHX39_00480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX3989623.1"
                     /translation="MPIKKGYKQLLAEANDIVETLTPAQAIAEYGKEGVVFVDLRDPR
                     ELDREGKIPGAFPCTRGMLEFWIDPESPYAKPIFAEDKRFIFFCAGGWRSALAAKTAQ
                     EMGLENIAHIEGGFGAWKQAGGPADPPKPRT"
     gene            complement(542..1057)
                     /locus_tag="VHX39_00485"
     CDS             complement(542..1057)
                     /locus_tag="VHX39_00485"
                     /inference="COORDINATES: protein motif:HMM:NF022607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2939 domain-containing protein"
                     /protein_id="HEX3989624.1"
                     /translation="MRTRWPVLATCFALGAGYLGYPYATLYRLDAAVRQSDASTLSSL
                     VDWHAVREGLKEDICDMVLDKPANAHPSNELAPFGDGFVRGMTGNALDHTVTPETLVS
                     MVRTGDTRAPTDAHVAWAFFENPTQFSVELRAAGIAEPIRLVMELQGLSWKVRRVWLP
                     NALLERAGSGT"
     gene            complement(1151..>2018)
                     /locus_tag="VHX39_00490"
     CDS             complement(1151..>2018)
                     /locus_tag="VHX39_00490"
                     /EC_number="4.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008838 - diaminopropionate ammonia-lyase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="diaminopropionate ammonia-lyase"
                     /protein_id="HEX3989625.1"
                     /translation="DLAAGRYAEMTQHITISSATDGNHGRAVAWAAARFHCRCVIYLH
                     ETVSVGREMAIAAFGAEVRRVPGTYDDAVRACARDAETHDRSIVSDTSWPGYTEIPRD
                     IMQGYRLMADEAADQWIGPKPTHVFIQAGVGGAAAAVSTQIRARWGRGEGRAPALVVV
                     EPDRAACLLASARTGRMTTVAGSLDTLMAGLACGEPSLLAWQELERSASAFMAIPDAA
                     AIDTMRFLAGLGIVVGESGVAGLAALRLAMADPDAAAALGLNQKSRVLVFGTEGATDT
                     MLYESLIHGVPG"
BASE COUNT          418 a          679 c          583 g          338 t
ORIGIN      
        1 ccctggtggg tgacatccgt acgtgcacaa tgtcacaccg cagccgcgcc atccgcatcg
       61 ttcgacctgc gccgcgcatc gtgccagatt gcccccagac actccggcca ccacaggata
      121 cgcacgcatg ccaatcaaaa agggctacaa acaactgctc gccgaggcga atgacatcgt
      181 ggaaacgctg accccggccc aggcgattgc tgagtacggc aaggagggtg tggtgtttgt
      241 cgatttgcgc gacccgcgcg aactcgatcg cgagggcaag atacctggcg cgttcccctg
      301 cacccgcggc atgctggagt tctggatcga tccggaaagc ccttatgcca agccgatctt
      361 cgccgaagac aaacgcttca ttttcttttg cgccgggggc tggcgatcgg cactggctgc
      421 gaaaaccgcg caggagatgg ggctcgaaaa cattgcacat attgagggtg ggttcggtgc
      481 ctggaagcaa gcgggcggac cggctgatcc gccaaagccg cggacctgac cgcatccccc
      541 gtcaggttcc ggagccggcg cgctccagca gcgcattcgg caaccagacc cgccgcacct
      601 tccaactcag cccctgcaat tccatcacca aacggattgg ctccgcgata ccagcagcac
      661 gcaattccac ggaaaactgc gtgggattct cgaaaaacgc ccatgccaca tgggcatccg
      721 tgggcgccct ggtatcgccg gtacggacca tcgacaccag ggtttcaggc gtgacggtat
      781 gatccagcgc attccccgtc attccacgca cgaaaccgtc gccgaacggt gcaagttcat
      841 tacttgggtg agcgtttgcc ggcttatcca gcaccatgtc gcaaatgtct tccttcaagc
      901 cctcccgaac ggcatgccaa tccaccaggg agctcaaggt cgaggcatcc gactgccgca
      961 ctgcggcatc caggcgatac agcgttgcat agggataacc gagatacccg gcacccaacg
     1021 cgaaacacgt cgcgagaact ggccatctcg tgcgcatcgc acgctcctcg ttcagcacag
     1081 gtcccccaga cgggcccgat tgaaagcagc aagcgtcgtg tgcacaaacg cctggccggc
     1141 tggtgtcaca tcagcctggc acaccgtgga tcagagattc atacaacatc gtatcggttg
     1201 ccccttcggt tccaaacacc agaacccggc tcttctgatt gaggccaagc gccgcagctg
     1261 cgtccggatc tgccatcgca agtcgcaaag cggccagacc ggccacacct gattcaccca
     1321 cgacaatgcc aaggccagca aggaaacgca tggtatcgat cgcagctgca tcagggatcg
     1381 ccataaacgc agaggctgaa cgctccagtt cctgccaggc cagcaaactc ggctctccgc
     1441 aagcaagccc ggccataagg gtatcaaggc tgcctgcgac agtggtcatt cgaccggtgc
     1501 gggcgctggc cagcagacac gcggcacggt ccggctcgac cacgaccaac gctggcgcac
     1561 gcccctcccc tcgcccccac cgcgcccgta tttgggtcga gacagcggcc gccgcgccgc
     1621 ccacgccagc ttggatgaag acatgggtgg gcttcggtcc gatccattga tccgccgcct
     1681 cgtcagccat caggcgataa ccctgcatga tgtcacgcgg tatctcggtg tagccgggcc
     1741 acgatgtgtc ggagacgatg gaccggtcgt gcgtctcggc atcgcgcgcg cacgcccgta
     1801 ccgcgtcgtc gtaagttccc ggaacgcgcc ggacctcggc gccaaatgcg gcaatcgcca
     1861 tttcccggcc gacgctgacg gtttcgtgga gataaatgac gcaccggcaa tggaatctcg
     1921 cggcagccca cgccactgcg cgaccgtggt tgccgtcggt ggcagaactg atcgtgatat
     1981 gttgcgtcat ctcggcgtag cggccggcgg cgagatcg
//
LOCUS       DATAVD010000031         4707 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_748947, whole genome shotgun sequence.
ACCESSION   DATAVD010000031 DATAVD010000000
VERSION     DATAVD010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4707
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_748947"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..921
                     /locus_tag="VHX39_00495"
     CDS             <1..921
                     /locus_tag="VHX39_00495"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX3989626.1"
                     /translation="EVRGLIVSALGWSSLGALILAVIGGSLVRGAVLRRVEAINSTAS
                     AIVQGDLSHRVPTRGSSDEFDRLARTINTMLEQIERLIEGVRNATNVVAHDLRTPLAE
                     LRTRLETLIATRPPQAETYDELQDTVGDIDRIVNIFNALLRLAEIDSGVRRAGFRRVE
                     LASVTTELTELYEPLAEEKHVAMTVEAPEGISVRGDPDLLAQAIGNLVDNAIKYTPCG
                     GKVALRIASDVKDQVSVAVTDTGPGIGDVDKARVTERFYRGNRASGTEGIGLGLSVVD
                     AVTRLHGGSLAFHDNGPGLEVILTLPRDAD"
     gene            940..2121
                     /locus_tag="VHX39_00500"
     CDS             940..2121
                     /locus_tag="VHX39_00500"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF004770.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEX3989627.1"
                     /translation="MSLVRAAIEELEDSPIVDVWRMGYGNPEVIGMFAGESDVPTPAF
                     ICDAASKALAEGRTFYSPNRGIQAMRDALIAYNKRIYGIDLPDDRITLTTSGMSAVML
                     IAQATVGPGDNAVAVTPSWPNILRAMQICGAEPREVAMTAGNTGWSLDIDALFAACDA
                     RTKVIYLASPGNPTGWMIPRAQAEQLLDFARTRGIAILSDEVYHRLVYEGPGSDRGVA
                     FSFLDIARPDDPVFVVNSFSKAWAMTGWRLGWIVYPAGHRESFEKLIQFNYSGAAEFL
                     QHGAIAALKHGEDFVKFFADRCRGGRDLVNARLARMQRVRNIPNTGGFYAMFEVAGVN
                     DTLTFCKRAVLEAKIGMAPGVAFGRGSERFVRLCYARSDEQLTVAMDRLEAFVAGYRE
                     T"
     gene            complement(2267..2842)
                     /locus_tag="VHX39_00505"
     CDS             complement(2267..2842)
                     /locus_tag="VHX39_00505"
                     /inference="COORDINATES: protein motif:HMM:NF018446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022841 - potassium ion leak channel
                     activity [Evidence IEA];
                     GO_process: GO:0071805 - potassium ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HEX3989628.1"
                     /translation="MYPKARLDALSDSIFGVAMTLLVLDVRLPDSFEPHNAPELLQGL
                     LSLLPKFLPYMLSFVVLGLRWLSNIHLRSREESCSRSYATWWLGYHLLITCVPFTTIV
                     VGRFVEFAPATWLYAGNTILISLVAFRLLALTPSFERRDHLRDRQIALSVLIASSVLA
                     IGWSFVSPHYALWALALNGASPMISRRLGGV"
     gene            2979..3356
                     /locus_tag="VHX39_00510"
     CDS             2979..3356
                     /locus_tag="VHX39_00510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c family protein"
                     /protein_id="HEX3989629.1"
                     /translation="MRHSLHIAALLAMPAVVWPLSVRAADAVAGQAVFKSQCSICHSP
                     LDGKNMVGPSLFGVIGRKSGSVAGFHYSAANKAADITWNADILNRYLTSPRDVVPGTI
                     MTYAGLKDDAKRADLIAYLETLH"
     gene            complement(3348..>4707)
                     /locus_tag="VHX39_00515"
     CDS             complement(3348..>4707)
                     /locus_tag="VHX39_00515"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX3989630.1"
                     /translation="EDTFLLNDPYAGGTHLPDIAIVQPIIVNGQLMAFSAAMTHHQDM
                     GGMAAGSVPTNATEIYQEGLRLPPLKLRDAGVENATLVRIIRQNVRIPDTVMGDINAQ
                     VAACKIGARRVTELAGKFGHNALTAIFDELLARSETMTRRALARIPAGTFRYVDYLDN
                     DGIDLDRPIRIEVAVTVGDGRIHIDFTGTSDQVRGPLNCVPSGSLAAACFAIRALTDP
                     AIPTNAGCFRPISLHLPEGSLVNPREPAPVNARTSTIKRIAGAIIAALAEVMPDRVPA
                     PSAGAMLMLAFGGRQPAGGNFVTGDLVAGGSGASAGSDGVGVIETDATNCMNLPAEAM
                     EMATPIRLNRVALRAGSGGVGKFSGGAGTIREYEVLVDNVTFTHRGERHYSAARGVFG
                     GGDGARAESVIIRADGTEQIIPSKMVTRLMCGDRVIVKTAGGAGYGDPATRAAADGAD
                     SV"
BASE COUNT          937 a         1424 c         1443 g          903 t
ORIGIN      
        1 gaggtccgcg gactgatcgt cagtgccctt ggctggtcat ccctcggcgc actgatcctg
       61 gccgttatcg gtggatcgtt ggtgcgcggt gccgtgctcc gtcgcgtcga ggcgatcaat
      121 agcacggcaa gcgcgatcgt acagggcgat ctgtcgcatc gggtccccac ccgcggatcc
      181 tccgatgaat tcgatcgtct ggcacgtaca atcaacacca tgctggaaca aatcgaacgt
      241 ctgatcgaag gtgtgcgcaa cgcgacaaat gtcgttgcgc atgacctgcg cacaccgctg
      301 gccgagttgc ggacgcgact ggaaacgctg atcgccaccc gcccgccgca ggcggagacc
      361 tatgacgaac tccaggatac cgtcggcgat atcgaccgca tcgtaaatat cttcaatgcg
      421 ctgctgcgat tggcggaaat tgactccggc gtgcgtcggg ccggattccg tcgggtcgag
      481 ctggcgagcg tgacaaccga actgacggaa ctctacgaac cgctggcgga ggaaaagcac
      541 gttgccatga cggttgaagc tccggaggga atttcggtgc gcggcgatcc cgatctactg
      601 gcgcaggcaa tcggcaacct tgtcgataac gcaatcaaat atacaccctg cggaggcaag
      661 gtggcgttgc gcatcgcatc cgatgtgaag gatcaggtgt ccgttgccgt caccgacacc
      721 gggccgggaa tcggtgacgt ggacaaggcg agagtgacgg aacggttcta ccgcggcaac
      781 cgcgcatcgg ggaccgaggg catcgggctc ggtctgagtg tggtcgacgc agtgacgcgg
      841 ttgcatggcg gctcgcttgc tttccatgac aacggaccgg gactggaggt gattttgacc
      901 ttgcctcgag acgcggattg accgcattag gacgccatca tgagtttggt tcgcgccgcc
      961 atcgaagaac tcgaggacag tccgatcgtc gatgtctggc ggatgggcta cggcaatccc
     1021 gaagtcatcg ggatgtttgc cggcgaatcc gacgtcccga ctccggcgtt catttgcgat
     1081 gccgcgagta aagcgttggc tgagggccgc acgttttact cgccgaaccg cggtatacag
     1141 gcaatgcgcg acgcgctgat cgcctacaac aagcggattt acggcattga cctgccggat
     1201 gaccggatca ctttgaccac gtcaggcatg agcgcggtga tgctcatcgc tcaggcaaca
     1261 gttggcccgg gcgacaatgc ggttgcggtg acgccatcgt ggccaaacat cttgcgcgcg
     1321 atgcagattt gcggggccga gccgcgcgag gtcgcgatga ccgccggcaa cactggctgg
     1381 tcgctcgata tcgatgcgtt gttcgcagca tgcgatgcaa gaaccaaggt catctacctc
     1441 gcctcaccgg gcaatccgac cggctggatg atcccgcgcg cgcaggccga acagttgctg
     1501 gacttcgctc gcacccgcgg catcgccatt ctctcggacg aggtctacca tcggctggtt
     1561 tatgaaggac ctggatccga tcgcggcgtg gccttcagtt ttctcgatat cgcccgtccc
     1621 gacgacccgg tcttcgtcgt caatagcttc tccaaggcct gggccatgac cggctggcgg
     1681 cttggctgga tcgtttatcc cgcaggacac cgcgagtcgt tcgagaaact gatccagttc
     1741 aattactccg gtgcggcgga gtttctgcag cacggcgcca ttgcggcctt gaaacatggt
     1801 gaggatttcg taaaattctt tgccgaccgc tgccgcggcg gccgtgacct ggtgaacgca
     1861 aggttggccc gcatgcagcg ggttcgcaac attcccaata cgggcggctt ctatgccatg
     1921 ttcgaagtgg cgggcgtgaa cgatacgctg acgttctgca aacgcgcggt actggaggcg
     1981 aagatcggca tggcgcccgg cgtcgccttc ggccgaggct cggagcgctt cgtgcggctg
     2041 tgctacgcca gaagtgacga acaattgacg gtggcgatgg accgccttga agcgtttgtg
     2101 gcgggctatc gggagacgtg acgcgggtca gaagggaacg aaccgccagg cgtcgaacgt
     2161 tcggctggca acatctgatg cgtggcgaac caccgccgaa gattgttgat gaactgatcc
     2221 gcacgacatg gcacgcagtc gtcgatgggc agcgacttcg ctggttctat actccgccca
     2281 accgtcgact gatcatcgga ctggcgccgt tgagggccaa tgcccataac gcgtagtgtg
     2341 gactgacgaa actccagccg atggccaata cggacgatgc aatcagcacg ctcagcgcaa
     2401 tttgccggtc ccgcagatga tcgcgccgct cgaacgacgg cgtcaatgcc agcaagcgga
     2461 atgcgaccag ggaaatcagg atcgtgttgc cggcgtacaa ccaggtggcc ggcgcgaatt
     2521 ccacaaaacg gccaaccacg atcgtcgtaa acggcacgca ggtgatgagc agatgatagc
     2581 ccagccacca ggttgcgtag gagcggctgc atgattcctc gcgcgagcgt aggtgaatgt
     2641 tcgacagcca gcgcaagccc agtacgacaa agctcaacat atagggcaag aactttggca
     2701 gcaggctgag cagaccttgc aacaactcag gcgcattgtg cggctcaaac gagtcaggca
     2761 gtctgacgtc gagcacaagc aatgtcatgg caacaccgaa gatcgagtcg ctcagcgcat
     2821 cgagacgtgc ctttggatac atgaaccatt cctcgttaga ctgcggcaac cgtgtcaggg
     2881 gtgatgacgg tttctcaatc caccgtcccg gaggcggttg acaatgaggg gttgcgattc
     2941 cagggccccc tgtggtggta atttcgggag atttgttgat gcgccattcg cttcatatcg
     3001 ccgcgctgct tgccatgccc gccgtcgttt ggccgctgtc ggttcgtgcc gcggatgctg
     3061 tggcaggcca ggcggtattt aaatcacaat gtagcatctg ccactcgccg ttggacggca
     3121 aaaacatggt gggcccgagc ctgtttggcg tgatcggccg taagagcggt tcggtcgccg
     3181 gatttcacta ttcggcggca aacaaagccg ccgacatcac atggaacgcg gacattctta
     3241 atagatatct cacgtcgcca cgggacgtcg tgccgggtac cataatgacc tatgccggcc
     3301 tgaaggatga cgccaaacgc gcagacctga tcgcgtattt ggaaacgcta cactgaatct
     3361 gcgccatcgg cggctgcccg cgtcgcggga tcgccatagc ccgcgccgcc cgcggttttg
     3421 acgatcacgc ggtcgccgca cattaaacgc gtcaccatct tcgacggaat gatctgttcg
     3481 gttccgtcgg cgcggatgat aaccgactcc gcacgcgccc cgtcaccacc gccgaacacg
     3541 ccgcgagcag cggaataatg gcgctcacct cggtgcgtaa aggtcacgtt gtcgaccagc
     3601 acttcatatt cccgaatggt gcccgcccca ccgctgaatt ttcccacgcc acccgagccg
     3661 gcgcgcaacg ccacccgatt gagccggatt ggcgttgcca tttccatcgc ctcggcaggg
     3721 aggttcatac aattggtggc atcggtttca atgaccccga ccccgtcact gccggcggag
     3781 gcgccgcttc cgccggcgac caaatcgccg gtgacaaaat tgccacccgc tggttggcgg
     3841 ccgccgaatg cgagcatgag cattgcaccg gccgacgggg cgggcactcg atccggcatg
     3901 acctcggcca atgccgcgat gattgcgccg gcgatccgct tgatggtcga ggtccgtgca
     3961 ttcaccggtg ccggctcacg cgggttgacc aggctgcctt ccggcaaatg caacgaaatc
     4021 ggccggaagc agccggcatt cgttgggatc gccgggtcgg tcaacgcgcg gatcgcgaaa
     4081 cacgccgctg ccaacgaccc ggatggcaca cagttcagcg gcccgcgcac ctgatctgag
     4141 gttccggtaa agtcaatgtg aattcgacca tcgccgacgg tgaccgcaac ctcgatccgg
     4201 atcggcctgt cgaggtcgat cccatcgtta tcgagataat cgacatatcg aaaggtcccc
     4261 gcaggaatgc gcgccaacgc ccgccgtgtc atggtttccg aacgcgccag cagttcatcg
     4321 aaaattgccg tcaatgcgtt atgaccaaac ttccccgcca gttccgtcac ccgccgcgcg
     4381 ccaattttgc acgccgccac ctgagcgttg atatcgccca tgaccgtgtc tggaatgcgc
     4441 acgttctgcc ggatgatgcg caccagtgtt gcgttctcaa cgcccgcgtc acgcagtttc
     4501 agtggtggca ggcgcaggcc ttcctgatag atttccgtcg cgttggtcgg taccgagccg
     4561 gccgccatcc cacccatgtc ctggtgatgg gtcatcgccg cgctgaacgc catcaattgt
     4621 ccattgacga tgatcggctg cacgatggcg atgtccggca gatgcgtccc gccggcataa
     4681 ggatcgttca gtaggaacgt atcctcg
//
LOCUS       DATAVD010000032         2991 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_561499, whole genome shotgun sequence.
ACCESSION   DATAVD010000032 DATAVD010000000
VERSION     DATAVD010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2991
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_561499"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1607)
                     /gene="leuS"
                     /locus_tag="VHX39_00520"
     CDS             complement(<1..1607)
                     /gene="leuS"
                     /locus_tag="VHX39_00520"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019088185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEX3989631.1"
                     /translation="MNDTSAPVAAEGPRYDFRSAEPKWQAAWSDRACFAVADVPTDGK
                     PKYYVLEMFPYPSGKIHMGHVRNYTLGDVVARYKRARGFAVMHPMGWDAFGLPAENAA
                     RERGIHPARWTYDNIATMKAELQRMGLSLDWAREFATCDPEYYGHQQQLFLDFFRAGL
                     VERKESWVNWDPVDGTVLANEQVIDGKGWRSGAPVEKKQLSQWFFSITKYAPDLLSAL
                     DTMDRWPERVRLMQANWIGRSEGARLRFDLATDAPREATGERIAGVEVYTTRPDTLFG
                     MSFLAIAPEHPLAAAVASHDRKAAAFIAECRSLGTSEAAIETAEKRGYDTGLRVAHPF
                     IDGATYPVWIANFVLMEYGTGAIFGCPGHDQRDLEFARKYGLEVIPVVLPPGADPATF
                     SIGKEAYVGPGIAFNSEFLNGLDVDAAKRAAIDALAAKSVGQGVTNWRLRDWGMSRQR
                     YWGCPIPIIHCDDCGVVPVPDDQLPVRLPDDVTFDRPGNPLDHHPTWKHVACPSCNRP
                     ARRETDTFDTFVDSAWYFARYCSPNASA"
     gene            1750..>2991
                     /locus_tag="VHX39_00525"
     CDS             1750..>2991
                     /locus_tag="VHX39_00525"
                     /inference="COORDINATES: protein motif:HMM:NF036516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M61"
                     /protein_id="HEX3989632.1"
                     /translation="MLSSLLAMLLGVLPAPAQTPVAPGPPMAAPQDRDYFGNIRLEVD
                     ATDVTRHIFSVHETIPVRAGPVLLFYPKWIPGTHAPGGQIAGLAGLVIKAGEQRIEWA
                     RDTEDVYAFHVSVPHGTTQLDVQFQFLSAGEGGDGRVVTTPEMLSLQWNSVVLYPAGY
                     FVRRITVDPSLRLPDGWQFATALDVASQTGASIAFRPVSLNTLVDSPVLSGLYVRRVD
                     LATEPVPVRLDIFADHPELLEATPKQLDAHRALVTQANKLFNSHHYDHYDFLLSLSDR
                     LGGIGLEHHRSSEDGTVPGYFTEWDGNPDLRDLLSHEYTHSWNGKFRRPADLWTATFN
                     EPERDSLLWVYEGQTQYWGYVLAARAGLLTKQETLDAVAGIAAAFQHRTGREWKSLQD
                     TTNDPIVEMRRGLPWRSWQRSE"
BASE COUNT          548 a          937 c          949 g          557 t
ORIGIN      
        1 gcggacgcgt tcggcgagca gtagcgggcg aaataccagg cactgtcgac gaaggtgtcg
       61 aacgtgtcgg tctcccgccg ggccggacgg ttgcaggacg gacaggcgac gtgcttccag
      121 gtcgggtggt ggtccagcgg attgcccggg cggtcgaacg tcacgtcgtc cggcagccgc
      181 accggcaact gatcgtcggg gaccggcacc acgccgcagt catcgcagtg gataatcgga
      241 attgggcagc cccagtagcg ctggcgagac atgccccagt cccgcagccg ccaattggtg
      301 acgccctgcc ctacgctttt ggccgccaac gcgtcgatgg ccgctcgttt cgctgcgtca
      361 acgtcgaggc cgttcaggaa ctccgagttg aacgcgatgc cgggaccgac ataggcctcc
      421 ttgccgatgg agaacgttgc cgggtcggcg cccggcggca acacgacggg aataacctcc
      481 aacccatact tccgtgcgaa ttccaaatct cgctgatcgt gtcctgggca accgaaaatc
      541 gcgccggtgc cgtattccat caacacgaaa ttggcgatcc agaccggata ggtcgcgccg
      601 tcgatgaacg ggtgcgcaac ccgcaggccg gtatcgtaac cgcgcttttc ggcggtctcg
      661 atggccgcct cgctggtgcc cagggagcgg cattcggcga tgaaggccgc agctttgcga
      721 tcgtgcgacg ccaccgcggc agcgagcgga tgttccggtg cgatcgcgag gaacgacatg
      781 ccgaagagcg tatcgggccg cgttgtgtag acctcgacgc ccgcgatgcg ctctccagtg
      841 gcctcgcgcg gagcgtccgt cgccaggtcg aaccgcaatc gcgcaccctc gctgcggccg
      901 atccagtttg cctgcatcag ccgaacccgt tccggccagc gatccatggt gtcgagcgca
      961 ctcagcaggt ccggcgcata tttggtgatc gagaagaacc attggctgag ctgcttcttc
     1021 tccaccggcg caccggagcg ccagcctttg ccgtcgatca cctgttcatt ggcaagcaca
     1081 gtgccgtcca ccggatccca gttgacccag ctttccttgc gctcgacgag gccggcgcgg
     1141 aaaaaatcca ggaacagctg ttgttggtgg ccgtaatatt cgggatcaca ggtggcaaat
     1201 tcccgcgccc aatccagcga caggcccatg cgctggagtt ccgccttcat ggtggcgatg
     1261 ttgtcgtaag tccagcgggc gggatggatg ccacgttcgc gcgcggcgtt ctcggcgggc
     1321 aggccgaagg cgtcccagcc catcgggtgc ataacggcga agcctcgggc acgtttatag
     1381 cgcgccacca cgtcgcccaa cgtgtaattg cggacgtggc ccatgtggat cttgcccgac
     1441 ggataaggaa acatctcgag cacgtagtat ttgggcttgc cgtcggtggg gacgtcggcc
     1501 acggcgaagc aggcacggtc ggaccaggcg gcctgccact tcggctcggc ggagcgaaaa
     1561 tcgtagcgcg gaccctcggc cgcgaccgga gcgctggtgt cgttcatggt gcgatgtatc
     1621 gggcggtcag gggtgagttg caagtctgct gggacccact tctcctgggc gtccgcccgt
     1681 tgtggagcga cgccggggag agcacgatcc ccgcgcgtca tctcaggggg gcacatgata
     1741 cacaggacga tgctgtcctc cctgctcgcc atgttgcttg gcgtcttgcc tgctccggca
     1801 caaacgcctg tcgcaccagg cccgccgatg gcagcgccgc aagaccggga ctatttcgga
     1861 aacattcgtc ttgaggtcga tgcgaccgac gtcacgcgac acatattcag cgtccacgaa
     1921 acgatcccgg tgcgggccgg accggttttg ctgttctatc cgaaatggat acccggaaca
     1981 catgcgcccg gtgggcagat cgccggcctg gccgggctcg tcatcaaggc gggtgaacag
     2041 cggatcgaat gggcgcgcga caccgaggat gtctacgcgt ttcacgtgag tgtccctcac
     2101 gggaccacgc aactcgacgt gcaattccag ttcctgtccg ccggcgaagg tggcgatggc
     2161 cgcgtcgtca ccactccgga gatgctgagc ctgcaatgga acagcgtcgt gctctatcca
     2221 gccggatatt tcgtccgccg gatcactgtc gaccccagcc tgcggctgcc tgacggttgg
     2281 caatttgcca ccgcactcga tgtcgcgtcc cagaccggag cctcgatcgc attccggccg
     2341 gtgtcgctta acacgctcgt ggactcgccg gttctctcag ggctctatgt gcggcgagtg
     2401 gacctcgcaa ccgaacccgt gccggtgcga ttggatattt tcgccgatca ccccgagctt
     2461 ttggaggcaa cgccgaaaca actcgatgcg catcgcgcac tcgtgaccca ggcaaacaag
     2521 cttttcaatt cgcatcacta cgatcattac gacttcctgt tgtcgttgtc cgatcgtctc
     2581 ggcggcattg gattggaaca tcaccgctcc agcgaggatg gcacggtgcc gggctatttc
     2641 accgagtggg acgggaaccc cgatctcagg gatttgttgt cgcacgaata cacccactcc
     2701 tggaacggca agttcagacg gcccgcagat ctttggacag cgaccttcaa tgagccggag
     2761 cgtgacagct tgttgtgggt ctatgaaggg caaacccaat attggggcta tgtcctggcg
     2821 gctcgagccg ggttgttgac caaacaggaa accctcgacg ctgtggcggg aatcgctgcg
     2881 gcgttccaac atcgcaccgg ccgtgaatgg aaatcgttgc aggacacgac caacgatccg
     2941 attgtcgaga tgcgtcgcgg gttgccctgg cgcagttggc aacgcagcga a
//
LOCUS       DATAVD010000033         4276 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1678935, whole genome shotgun sequence.
ACCESSION   DATAVD010000033 DATAVD010000000
VERSION     DATAVD010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4276
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1678935"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1224
                     /locus_tag="VHX39_00530"
     CDS             <1..1224
                     /locus_tag="VHX39_00530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX3989633.1"
                     /translation="EAGLAGLATEKFDLDGKHVGTGGGNHVVMGGASAAESPFLRRPD
                     LLKSLLGFWHNHPSLSFMFSGQFIGPTSQHPRIDEARQDSLAELEIAFSQIHPGVAVP
                     PWMTDRLFRNILTDMTGNAHRTEFCIDKLYTPDSASGRRGLIEFRALEMPPGTRMAAA
                     QMLLMRAAVAAFWEQPYERQLIRWGTRVHDDFMLPHYVERDFASALDELQARGHALDP
                     AWFAPHLAFRFPHIGSIPVHDAAVDLRAALEPWHVLGEETGAAGTVRYVDSSVERVQA
                     RVSGWIDERFALACNGRAVPLSATDREGEFVGGVRFKAWNPPSALHPTVGVHVPLIFD
                     VFDRWSGRSLGGMTYHVAHPGGRHYEHRPVNANEAEARRRARFFPFGHTPGEMPEPVE
                     HRSREHPRTLDLRRT"
     gene            1382..2839
                     /locus_tag="VHX39_00535"
     CDS             1382..2839
                     /locus_tag="VHX39_00535"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3989634.1"
                     /translation="MASPPIAAGSGDGSMMSRSADGLSTRSATEAERLTARLDRLPMT
                     RTLWIMAILLTFGGFFDGYAIGLIGALGPGLFKAGIFTATTVSFFGMTGFASFVAALF
                     AGFFVATLLVSYVADHFGRRAIFAYSLLWFGIANFIMGMQTTADGINLWRFISALGVG
                     LELVTVDAYLSELVPKKSRGAAFGFLQAMSAIAFLVSYFLSWQLIPTSIWGYDGWRWV
                     VFIGSIGAVVIWWIRLGLPESPRWLAQQGRMEEAEKVMAQIEARVAADYRRPLPEPES
                     PHYQDPRKGSLWEIFSPVYLKRTIMLMLFNFFQTVGFYGFVAWTPTLLIAKGIHVTQS
                     LEYSTIINIAAVIFPLLIMLFADMIERKWHSCLACLAIALFGIWFANVDSSWALIALG
                     ACLAMSAQWLSFGLHNYQAELYPTRIRARGVGFVYSWSRLSGILTPFFIAFFLRDFGP
                     TGVFAFVAVCMAIVIVSVATLGPRTNRMEVEAIAH"
     gene            2933..3928
                     /locus_tag="VHX39_00540"
     CDS             2933..3928
                     /locus_tag="VHX39_00540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989635.1"
                     /translation="MDPKTTTLLVKIVALFDSPNEGERNNAFTKAQELLEKNGQSMAD
                     VLEVLTTLGARPSAVADFADRVQGRDTQAGTADHTEPEKTERYERPAPRHDQAESRAE
                     VIARYGSVQAALQPCTRETLLRGSVRRDSTFHAPPNERWTRSVYGYTSEHSAGPARNR
                     ALQAIAQAYPLPANMQDAVLELAHWDRRDRELQLVLAPDGKLDLTADLRRELIRNLIR
                     SELHVHGEEELQIRLQFWIDERQEEIDLTTLDEAKQLAEMVGRDLRTAIVQSGNATSV
                     LFARWVCDVVVPAMQVPGRGRPRSNPTFDAMLRNAMRAAIEPQRPGEAGSVLPDT"
BASE COUNT          797 a         1348 c         1302 g          829 t
ORIGIN      
        1 gaggccggtc tggctggtct ggcgacggaa aagttcgacc tggacggcaa gcatgtcggc
       61 accggcggcg gcaatcatgt ggtgatggga ggcgcctcgg ccgccgaatc accatttctt
      121 cggcgtcccg atctgctgaa atcgttactt gggttctggc acaaccatcc cagcctgtcg
      181 ttcatgttca gcggccagtt catcgggccc accagccagc accctcgtat cgacgaggcc
      241 cgccaggaca gcctcgcgga actcgagatc gcgttttcgc aaattcaccc cggcgtggcc
      301 gtgccgccat ggatgaccga tcggttgttc cgcaacattc tgaccgacat gaccggcaac
      361 gcgcaccgta cggaattctg catcgacaag ctgtatacgc cggattccgc ctccggccgc
      421 cgcggcctga tcgagtttcg cgcactggag atgccacccg gcacgcgcat ggcggcagcc
      481 cagatgctgc tgatgcgcgc cgccgtcgcc gctttctggg agcaacctta cgaacggcaa
      541 ctgatccgtt ggggcacccg cgtgcacgac gacttcatgc tgccgcacta tgtcgaacgg
      601 gattttgcca gcgcgctgga cgaactgcag gcgcgcggcc atgcgctcga tccggcctgg
      661 ttcgcaccgc atctggcgtt ccgcttcccg cacatcggct ccattccggt gcatgacgcc
      721 gcggtggatt tgcgcgccgc tctggaaccc tggcacgtgc ttggcgagga aaccggtgct
      781 gcaggaacgg ttcgttacgt tgatagctcg gttgaacggg tgcaggcgcg ggtcagcggt
      841 tggattgacg aacgttttgc cctcgcctgc aacggccgcg ccgtaccgct cagcgccacc
      901 gaccgagaag gcgagtttgt tggcggcgtt cgcttcaagg cctggaaccc gccaagtgcg
      961 ttacacccga cggtcggcgt tcacgtgccg ctgatcttcg atgtgttcga ccgctggagt
     1021 ggacgttctc tgggtggaat gacctatcac gtcgcacacc ccggcggccg gcattacgag
     1081 caccgcccag tgaatgcgaa tgaagcggaa gcgcggaggc gtgcgcggtt ctttccgttt
     1141 ggccacacgc ccggagagat gccggaaccg gttgaacatc gctcccgcga acatccgcgc
     1201 acgttggatc tgcgccggac gtaacgcagc agcgtcccgg gcgcggtcaa cccgcacttt
     1261 acacatccgg aaaaatcgcc tcagtctgcc gccggcttcc accgaaggaa gccaggccgc
     1321 ggatcgccaa acgtcatccg cagcttcgag actattcgga caagggaagg aaacgacacc
     1381 aatggccagc ccaccgatcg ctgcgggcag cggagatggc tcgatgatga gccgctccgc
     1441 agatggactc tcaacacgta gtgcaaccga agcggaacga ctgaccgccc ggctcgaccg
     1501 cctgccgatg acacgcacat tatggatcat ggcgatcctg ctcacattcg gcggcttctt
     1561 cgatggctat gccatcggcc tgatcggcgc cctggggccg gggttgttca aggccggcat
     1621 tttcaccgcg accaccgtca gctttttcgg catgaccggg ttcgccagct tcgtcgccgc
     1681 gctgttcgcc ggcttctttg tcgcaacgct gctggtgtcg tacgtcgccg atcatttcgg
     1741 ccgtcgcgcc atcttcgctt actcgctgct gtggttcggc atcgccaact tcatcatggg
     1801 catgcaaacc accgccgacg gcatcaacct ctggcgcttc atcagcgcgc tcggcgttgg
     1861 cctggagctg gtgacggtcg atgcttatct gtccgaactg gtgcccaaaa agtcccgcgg
     1921 cgccgccttc ggctttctcc aggcaatgag cgccatcgcc ttcctggtat cctatttcct
     1981 gtcctggcaa ctgatcccaa cgagtatctg gggttatgac ggctggcgct gggttgtctt
     2041 catcggctcc atcggcgcag tggtgatttg gtggatccgc cttggcctgc cggaaagccc
     2101 tcgctggctg gcccaacaag gccgcatgga ggaagccgag aaagtgatgg cgcagatcga
     2161 agcccgcgtc gccgccgact atcgcaggcc gctgccggag cccgagtcgc cacactatca
     2221 ggacccgcgc aaaggcagcc tctgggaaat cttcagcccg gtttacctca agcgcacgat
     2281 catgctgatg ctgttcaatt tcttccaaac tgtcgggttt tacggctttg tcgcgtggac
     2341 gccgaccttg ctgatcgcca aaggtatcca cgtgacgcaa agccttgaat acagcacgat
     2401 catcaacatc gctgcggtca tcttcccgct gctgatcatg ttgttcgccg acatgatcga
     2461 gcgaaaatgg cactcctgtc tggcctgtct ggcaatcgcc ttattcggca tctggtttgc
     2521 caatgtcgac agttcctggg ctttgatcgc tctgggcgca tgtctggcaa tgtcggccca
     2581 atggctatcg tttgggttgc ataactacca ggcagagttg tacccgacac ggatccgcgc
     2641 gcgcggcgtc gggttcgtct actcgtggag ccggttgagc ggcattctga cgccattctt
     2701 catcgcgttc tttttgcgcg atttcggtcc cacgggggtg ttcgcgttcg ttgcggtgtg
     2761 catggcgatc gtcattgtgt cggtcgcgac cctcggcccg cgtaccaacc ggatggaagt
     2821 ggaagcaatc gcacactaaa cagcaaggat gggtgggtgg tgatcatggc cggagtctga
     2881 cccgtcggcc gctccgcacc ccatccgagt gcgatctgcg taacgaaggc cgatggaccc
     2941 gaagacgacc actctgctgg tgaagatcgt tgccctgttc gactcgccga acgaaggcga
     3001 gcgcaacaac gcctttacca aagcacagga gctgctggag aagaacggcc aaagcatggc
     3061 cgacgtcctg gaggtgctga caacgctcgg cgccaggccg tcggccgtgg ccgacttcgc
     3121 agatcgggtg caaggccgcg acacccaggc tggcacggcc gaccacacgg aacctgagaa
     3181 aaccgaacgc tacgagcggc ccgcaccacg ccacgaccag gcggaatccc gtgccgaggt
     3241 cattgcacgc tacggctcgg ttcaggccgc gttgcagccc tgcacacggg aaaccttgtt
     3301 gcgcggcagc gtccgccgtg actcgacctt ccatgcaccg ccgaatgagc gctggaccag
     3361 gagcgtatac ggctacacat cagaacactc ggcgggaccg gcacgaaatc gggccttgca
     3421 ggcgatcgcg caggcctacc ccctgccggc caacatgcag gatgcggtgc ttgaacttgc
     3481 tcactgggac aggcgggatc gggagctgca actggtactg gcacctgacg gcaagctcga
     3541 tcttaccgcc gatctgcggc gggaactgat acgcaacctg atccgctcgg aattgcatgt
     3601 gcatggcgaa gaagagttgc agatcaggct gcagttctgg atcgatgagc gccaggagga
     3661 aatcgacctt accacgctgg acgaagcgaa gcagctcgcc gagatggttg gccgggacct
     3721 gcgcaccgcg atcgtgcaga gcggcaatgc gacctcggtg ctgttcgccc gctgggtctg
     3781 cgacgtggtc gtgccggcga tgcaagtgcc cggccgtggc cgcccccgtt caaatccgac
     3841 gttcgacgcc atgctgcgca acgcgatgcg cgccgcgatc gaaccgcaac gcccaggtga
     3901 ggcggggagc gtattgcctg acacgtaaag caggaaaccg gttacgcgac gctttgcatg
     3961 cacccaccga tggcgggaag ttgctccggc agccggttag atttcttgtg caaaagtgca
     4021 ggcatatcag catccacaat cagtggaccg tgggttgcga tttccccttc gtcatccgcg
     4081 tgcttgtcac gcggatcaag atcagcacct tgttgcgatt gtccccggaa caagtccggc
     4141 gatgacgatt gagacgatta ccgggacgac aatcgaggcg agcgcggggg tgacgaatga
     4201 gtgtgtcata actgaacaat tccgcgtact atcccaaccg gtcctcagcc accttgaatt
     4261 gctcgatcac aaagtc
//
LOCUS       DATAVD010000034         1520 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_375818, whole genome shotgun sequence.
ACCESSION   DATAVD010000034 DATAVD010000000
VERSION     DATAVD010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375818"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..240
                     /locus_tag="VHX39_00545"
     CDS             <1..240
                     /locus_tag="VHX39_00545"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3989636.1"
                     /translation="VLPVSNAMIGRLTEPSQRGMAYGVISSAYFVGNSTGPIAGGAIA
                     ATIGINWVFAVTGMLLAVNFLWVWFKVPEVKDQPG"
     gene            complement(256..>1520)
                     /locus_tag="VHX39_00550"
     CDS             complement(256..>1520)
                     /locus_tag="VHX39_00550"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX3989637.1"
                     /translation="TGLSVDEIEQFGTLYGTTKRSYIRAGYGFARSRNGAANMHAVTC
                     LPSVTGAWQHEGGGALWSNRGMYHWNKTLIEGLDAVDTRIRAMDMSRIGSVLTGDRNE
                     LRDGPEVHAMLIQNQNPLTVCPDSNRVRRGFSREDLFVVTHEQFLTETARWSDVVLPA
                     TMFMEHDDVYQAGGHSFIQIGPKLIDPPGECRSNHELLQALALRLGAKHRGFEMTAME
                     MIDATLTESGWPDAATVQRERWIDAMPEFQDAHFLAGFPQPDKRFHFAPDWSRFGENH
                     AIMPKLPDHMAIIEQASPDLPFRLVTAPARSFLNTSFSEMKSSQRREGRPTVRLHPDD
                     ARTTGIKDGDKVRLGNHRGEVVLHATLASGQLPGVLVSESIWPSEYFEGGIGINALTS
                     DDPGPPYGGAVFHDTAVWLRLEQPTAPR"
BASE COUNT          279 a          442 c          476 g          323 t
ORIGIN      
        1 gtgttgccgg tgtcgaacgc gatgattggg cggctcaccg aaccgtccca gcgcggtatg
       61 gcgtacgggg ttatttcgtc ggcatatttt gtggggaatt cgaccggtcc gattgcgggc
      121 ggcgcgatcg cggcgacaat cgggatcaac tgggtgttcg cggtgacagg aatgttgctc
      181 gcagtaaact ttctgtgggt gtggttcaaa gtgccggagg tcaaggatca gccgggttga
      241 cgcatgaagc gttggttaac gcggtgccgt gggctgctcc aaccgcagcc agacggcggt
      301 atcgtgaaac accgcccctc cgtaaggcgg tcccggatcg tcgctggtca acgcattgat
      361 gccgattccg ccttcgaagt attcggacgg ccaaatgctt tccgaaacca gaacgcccgg
      421 cagctggccg gacgcaagtg tcgcgtgcaa caccacctca ccacgatggt tgccaagtcg
      481 caccttgtcg ccgtctttaa ttcccgttgt tcgagcatcg tccggatgca gcctgacggt
      541 gggccggccc tcgcggcgct gactggactt catttcgctg aagctggtgt tgaggaagct
      601 gcgtgcgggc gctgtcacca gtcggaacgg caggtccgga ctggcttgct caatgatcgc
      661 catatgatcg ggcaatttcg gcatgatcgc atgattttcg ccgaaccgcg accagtcagg
      721 agcgaaatga aagcgtttgt ccggctgcgg gaatccggcg aggaaatgcg cgtcctggaa
      781 ttctggcatg gcatcgatcc aacgctcgcg ttgcacagtt gccgcatcgg gccagcctga
      841 ttccgtcagc gtggcgtcga tcatttccat cgccgtcatc tcaaacccac gatgtttggc
      901 gccgaggcgt agcgccagcg cctgcagcag ttcatggttc gatcgacact cgccgggcgg
      961 atcgatcaat ttgggcccga tctggatgaa gctgtggcca ccggcctggt agacatcgtc
     1021 gtgttccatg aacattgtcg ccggcagtac gacatcggac catcgcgcgg tctcggtgag
     1081 aaattgctcg tgtgtcacca cgaacagatc ctcacgggaa aacccgcggc gcacgcggtt
     1141 ggagtcgggg caaaccgtga gtggattctg attctggatc agcatcgcgt ggacctcagg
     1201 cccgtcccga agttcgtttc ggtcgccggt caggacgctg ccgatccggc tcatgtccat
     1261 ggcacggatc ctggtatcga ccgcgtccag gccttcaatc agcgttttgt tccaatgata
     1321 cataccgcga ttggaccaca gcgccccgcc accttcgtgc tgccaggcgc cggtcactga
     1381 tggcaggcag gtgaccgcgt gcatgttggc cgcaccgttg cggctgcgtg cgaaaccata
     1441 gccggcacga atgtagctgc gcttcgttgt gccatagagc gtgccaaatt gctcgatttc
     1501 atcaaccgac aggccggtga
//
LOCUS       DATAVD010000035         1770 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3353812, whole genome shotgun sequence.
ACCESSION   DATAVD010000035 DATAVD010000000
VERSION     DATAVD010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3353812"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            53..>1770
                     /locus_tag="VHX39_00555"
     CDS             53..>1770
                     /locus_tag="VHX39_00555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX3989638.1"
                     /translation="MAGVDVLAEAFSGANAAFLSEQYARWAVNPTSVDPSFADLFDAM
                     DDEARAVLADVAGASWAPHTTQEPTQAGTPSNEQVRAATIASLRALMLIRSYRVRGHL
                     EARLDPLGLQIPGPHAELDPRTYGFTNADLDRPIFIDNVLGRETATLREIVRIVRDTY
                     CGSIGVEFMHIQDPDQKSWIQRKVEGAPWIGAFNAEQKRTILRQLTEAEGFEAFCQKR
                     YVTTKRFGLEGGESAIPAMHAIIETAVRGGVREVAIGMPHRGRLNTLVNIVKKPLTAL
                     FSEFGGESFKPDDVQGSGDVKYHLGTSSDQDIAGATVHLSLQPNPSHLEAVNPVVIGK
                     VRARQDSAGDTQRRSSVMAILMHGDAAFAGQGLVYETLAMSQLIGYRTGGTVHVIVNN
                     QIGFTTVPAHAYSGLYCTDVAKSIQAPILHVNGDDPEAVIFCANMAAEFRMRFATDIV
                     LDIVCYRRHGHNETDEPAFTQPIMYRAINAMKTTRTLYAERLAAEGVVPAAESQAMWD
                     AFAKTLDDANSAAKSYKPNKADWLEGHWAGFQAAEQEFEYTEQATAIPEPVLKQIGGS
                     LAKVPAG"
BASE COUNT          361 a          549 c          538 g          322 t
ORIGIN      
        1 cgggtgaggc atggctatgg atggcgaacg gataagtaag ggaccgtaag cgatggctgg
       61 cgtagatgtt ctggcagagg ccttcagcgg agcaaatgct gcgtttctga gcgagcaata
      121 tgcccgctgg gcagtcaatc ccacctccgt cgacccaagt tttgcggatt tgttcgacgc
      181 catggacgac gaggcccgag ccgtcctcgc cgatgtcgcc ggtgcctcct gggcgccgca
      241 tacaacccaa gaacctaccc aagccggcac gccgtcgaac gagcaggtgc gtgcggcaac
      301 aatcgcctcg ctgcgcgccc tgatgctgat tcgttcctac cgggtgcgcg gccatctgga
      361 ggcgcggctc gatccgcttg gcctgcaaat ccccggcccc catgccgagc ttgatccgcg
      421 cacctacggc ttcaccaacg ccgacctcga tcgcccgatt ttcatcgaca acgtactggg
      481 ccgcgagacc gcgaccttgc gagagatcgt gcgaatcgtg cgcgatacct actgcggctc
      541 gatcggtgtc gagttcatgc acatccagga tcccgaccag aaatcctgga tccagcgcaa
      601 agttgaaggc gcgccctgga ttggcgcatt caacgccgag caaaaacgca ccattctgcg
      661 gcaactgacc gaggcggaag gcttcgaggc tttttgtcag aaacgttacg ttacgaccaa
      721 acgattcggc cttgagggcg gcgaatccgc gatccctgcc atgcacgcga tcattgaaac
      781 tgcggtgcgg ggcggcgtgc gggaagtcgc catcggcatg ccgcatcgcg gccggctgaa
      841 cactctggtg aacattgtga agaagccgct gaccgcgttg ttctccgaat tcggcggcga
      901 gagtttcaag cccgacgacg tgcagggttc gggcgacgtg aaataccatc tcggcacctc
      961 gagcgaccag gacattgccg gcgccacggt gcatttgtcg ctgcaaccca acccgtcgca
     1021 tctggaggcg gtcaatcctg tggtgatcgg caaagtgcgg gcgcgtcagg acagtgccgg
     1081 cgatacgcaa cgccgcagtt cggtgatggc gattttgatg catggcgacg ccgccttcgc
     1141 gggtcagggg ctggtttacg aaaccctggc gatgagccag ttgatcggat accgcaccgg
     1201 cggcacggtg cacgtcatcg tcaataacca gattggcttc accacggtcc cggcgcatgc
     1261 ctattccggg ctttactgca ccgatgtggc caaatcgatc caggcaccga ttctgcacgt
     1321 caacggcgac gatcccgagg cggtgatctt ctgcgccaac atggccgccg aattccgcat
     1381 gcgattcgcc accgatatcg tgctggacat cgtctgctat cgccgccacg gccataacga
     1441 aaccgatgaa ccggcgttta ctcagccgat catgtatcgt gccatcaacg caatgaaaac
     1501 gacgcggacc ttgtacgccg aacgcctcgc cgctgagggt gtcgtgccgg ccgccgagtc
     1561 gcaggcgatg tgggatgcgt tcgcgaaaac gctggacgat gccaacagcg ctgccaaatc
     1621 ctataagccc aataaggccg attggctgga ggggcattgg gccggcttcc aggccgccga
     1681 acaggagttc gaatataccg agcaggcgac tgccatcccc gaaccggtcc tgaaacaaat
     1741 tggcggctca ttggcaaaag tgcccgccgg
//
LOCUS       DATAVD010000036         3364 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_189256, whole genome shotgun sequence.
ACCESSION   DATAVD010000036 DATAVD010000000
VERSION     DATAVD010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3364
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189256"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            67..1011
                     /locus_tag="VHX39_00560"
     CDS             67..1011
                     /locus_tag="VHX39_00560"
                     /inference="COORDINATES: protein motif:HMM:NF021599.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2332 domain-containing protein"
                     /protein_id="HEX3989639.1"
                     /translation="MTEAIARRFRRFSEVEAHGHSPLYEALCHGIAADPEILTFLADL
                     PAAKQQPNLLLAAVRFVCGVQTRPEDFHAALLTHKPAVRAEMLRRRTQTNEPARCASL
                     LPVLAQLPGPLALLEVGSSAGLCLLPDRYGYSYARHDSFGPEPRFPCEASAATPVPRG
                     IPSIVWRAGLDLNPLDVCNDDDMAWLETLVWPDQPDRAARLHAAIEVARKDPPRIVAG
                     DLLTALPALAAEAPTDATLVVFHTAVLAYVADPAARAGFIRTVRDLNAVWISNEAPYI
                     FPDIGVEPGRRGAFLLTVNGEPTAWTDPHGAWIDWIGT"
     gene            complement(1008..1580)
                     /locus_tag="VHX39_00565"
     CDS             complement(1008..1580)
                     /locus_tag="VHX39_00565"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEX3989640.1"
                     /translation="MRLFYQQAFNVLWLAWLIYWGIAAIGARPARYREPVLSSQLHHV
                     PMVVGLVLLMVPRLAGGSLTQRYLPPRTAWFFVGLLCTVLGLGFAVYARVWLGRNWSG
                     TVTLKQDHELIRGGPYRLVRHPIYTGLLLALLGSAIAIGEWRGLLGLTLITAGFLRRI
                     TVEERVLTEQFGDSYRRFQAEVPALVPGVY"
     gene            1665..2519
                     /locus_tag="VHX39_00570"
     CDS             1665..2519
                     /locus_tag="VHX39_00570"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3989641.1"
                     /translation="MKMWKIGDVTITKVVELEVTGGSRFLLPQATPEAVKPISWLQPH
                     FADENGRLRMSIHTFLVQTPTHRIVVDTCLGNDKENRRIPHWNDMHTTFLADIAAHGF
                     DRTSIDAVLCTHLHVDHVGWNTMKLNGKWVPTFPNARYLFGRIEHEHWAGISSREYMP
                     HVMADSVTPILDAGLATLVEYDHTIGAEISLLPTVGHTPGHVSVMIESRGERAMITGD
                     FMHHPCQIAHPEWDTTADTDKEQGIRTRRIMFERLAGTPVLVIGTHFAGATAGCIVRD
                     GETYRLDV"
     gene            2556..>3364
                     /locus_tag="VHX39_00575"
     CDS             2556..>3364
                     /locus_tag="VHX39_00575"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3989642.1"
                     /translation="MSYLRSGIFLAPFHALGENPTLALERDMELLQHLDKLNYHEAWI
                     GEHHSGGFEIIGSPEVFIAAAAERTKHIKLGTGVVSLPYHNPFILADRAVQLDHMTRG
                     RAMLGVGPGALVHDAKKIGIKPENQRRMMNESLDVIVALLKGETVTQKTDWYELEDAK
                     LQLPSYTQPVMEMAVAAARSPAGALAAGRHGIGMLSIGGTSHDAMVHHAENWNLYSEQ
                     ARLNHHQPHREKWRLVTLFHIAETREQARENVKFGLDHFADYFRDVATFPIV"
BASE COUNT          672 a         1058 c          991 g          643 t
ORIGIN      
        1 atgggagctg tgatcatgct gatctcattg gcggcgtttc agtttgtccg ggcgcgctga
       61 cctgccatga ccgaagcgat cgccaggcgg ttccgccgtt tctccgaagt cgaggcccac
      121 ggacactcgc cgctctacga ggcgctgtgt cacggcatcg ccgccgatcc cgaaattctg
      181 acgtttctgg cagacctgcc ggccgcaaag cagcagccca atctgctgct ggcggcggtt
      241 cgtttcgtat gcggtgtgca gacccgcccc gaggattttc atgccgcatt gctgacgcac
      301 aagccagccg tgcgtgcgga aatgctacgc cgccgcacgc aaaccaatga gccggcgcgc
      361 tgcgcgagcc tgctgccggt gctggcgcaa ttgcccggac cgctggcgtt gttggaggtc
      421 ggttcctcgg ccggtctctg tttgctaccg gatcgttatg gttattccta cgcgaggcat
      481 gattcatttg gtcccgagcc acgctttccg tgcgaggcca gcgccgcgac gccggtgccg
      541 agagggattc catccattgt ctggcgggcc gggctcgatc tcaatccgct cgatgtgtgc
      601 aacgatgacg atatggcgtg gctggaaact ttggtgtggc cggatcagcc cgatcgcgcc
      661 gctcggctgc atgctgcgat cgaggtcgcc cgcaaggacc cgccacgcat tgttgccggt
      721 gatctgctga ccgcgctgcc tgcgctggcg gcagaggcgc ccacggacgc aacgctggtg
      781 gtgtttcaca ccgctgttct cgcttacgtt gcggatccgg ccgcccgagc gggtttcatc
      841 cgtaccgtgc gggatttgaa tgcggtgtgg atcagcaacg aagcgccata catcttcccc
      901 gatatcggtg ttgaaccggg acggcggggt gccttcctgt tgaccgtcaa tggcgagcca
      961 acggcctgga ccgatccgca tggcgcctgg atcgactgga tcggaactta gtaaacacca
     1021 ggcaccagcg ccggtacctc ggcctggaaa cgcctgtagg aatcgccgaa ttgctcggtg
     1081 aggactcgct cctccaccgt gattctgcgc aggaacccag cggtgatcag cgtaagtccc
     1141 agcaggccac gccattcgcc gatggcaatc gctgaaccga gcaaagcaag cagcagccca
     1201 gtgtagatcg gatgccggac cagccgatat ggaccgccgc ggatcaactc gtgatcttgt
     1261 ttcagagtta ctgtgccgct ccagttgcgg ccaagccaaa cccgcgcgta aacggcaaat
     1321 ccgagaccga gcacggtgca taacaggccc acaaaaaacc acgcggtccg tggcggcaaa
     1381 tatcgttgcg tcagcgaacc gcccgccagt cgcggcacca tcagcagaac gagacccacc
     1441 accattggca cgtggtgcag ttggctcgag agcaccggtt cccggtaacg cgccggccgt
     1501 gcgccaattg cggcaatgcc ccaatagatc agccacgcga gccacaacac gttgaacgct
     1561 tgttgataaa acagacgcat cacatctccg cggcgccttg ggctttgcga gctgacgtga
     1621 cagtgccgca agcctgtgca aacgtcgagg ccaggagaag ggggatgaag atgtggaaga
     1681 tcggtgatgt gacgatcacc aaggttgtcg aactcgaggt caccggcggc agccgcttcc
     1741 tgttgccgca ggccacgcct gaggcggtca aaccgatttc ctggctgcaa ccgcattttg
     1801 ccgacgaaaa cggccggctg cgcatgagca tccacacgtt cctggtgcaa acgccaacgc
     1861 atcggattgt tgttgacacg tgcctcggca atgacaagga gaatcggcgc attccgcact
     1921 ggaacgatat gcacacgacg ttcctggcgg atatcgctgc ccacggcttc gaccggacgt
     1981 cgatcgacgc tgtgttgtgc acccatctcc atgtcgacca cgtcggttgg aacacgatga
     2041 agctgaatgg caagtgggtc ccgacgttcc ccaacgctcg ttacctgttt ggtcgtatcg
     2101 aacatgagca ttgggcaggg atttcttccc gggagtacat gccgcacgtc atggcggact
     2161 cagtcacgcc gatcctggac gccgggctcg ccaccttggt cgagtacgac cacaccatag
     2221 gcgccgaaat cagcctgttg ccgacggtcg gccatacccc cggtcacgtc agcgtcatga
     2281 tcgaatcgcg tggcgaacgc gcaatgatca ctggcgattt catgcaccat ccttgccaga
     2341 ttgcgcaccc ggaatgggac accaccgccg ataccgacaa ggaacaaggt atccgtaccc
     2401 gccgcatcat gttcgaacgt ctcgccggca cgccggtcct tgtcatcggc actcatttcg
     2461 ccggcgccac tgctggctgc atcgtgcgcg acggcgagac gtatcggttg gatgtgtgat
     2521 agagtgtcga caacctcgca taaggacgtc ccctcatgag ctatctgcgc agcggcatct
     2581 ttctggcccc attccacgcc ctcggggaaa atcccacact ggcgcttgaa cgcgacatgg
     2641 agttgctgca gcacctcgac aaactgaact accacgaggc gtggatcggc gagcaccatt
     2701 ccggcggctt cgagatcatc ggttcgcccg aagtgttcat cgccgccgcc gccgagcgga
     2761 cgaagcacat caaacttggc accggtgtgg tatcgttgcc ttatcacaac ccattcattc
     2821 tcgccgaccg cgccgttcag cttgatcaca tgacccgagg ccgcgccatg ctgggcgttg
     2881 gtcccggcgc gctggtgcat gacgcaaaaa agatcgggat caagcctgaa aatcagcggc
     2941 ggatgatgaa cgaatcgctc gacgttatcg ttgcgttgct gaaaggtgaa accgtcaccc
     3001 agaaaaccga ttggtacgaa ctggaagacg ccaaactgca attgcccagt tacacccagc
     3061 cggttatgga aatggccgtc gccgccgctc gttcacccgc tggagcgttg gccgccggcc
     3121 ggcacggcat cggcatgcta tcaattggcg gcaccagcca cgacgcgatg gtgcatcacg
     3181 ccgagaactg gaatctttac agtgagcagg cccgcctcaa tcaccatcag ccgcatcgcg
     3241 agaaatggcg cctcgtcacg ctgttccaca tcgccgagac ccgtgagcag gcgcgggaaa
     3301 acgtaaaatt cggtctcgat cacttcgccg attattttcg tgatgttgcc accttcccga
     3361 tcgt
//
LOCUS       DATAVD010000037         5495 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_376180, whole genome shotgun sequence.
ACCESSION   DATAVD010000037 DATAVD010000000
VERSION     DATAVD010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5495)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5495)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5495
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_376180"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1315)
                     /locus_tag="VHX39_00580"
     CDS             complement(<1..1315)
                     /locus_tag="VHX39_00580"
                     /inference="COORDINATES: protein motif:HMM:NF016464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase 61 family protein"
                     /protein_id="HEX3989643.1"
                     /translation="MQPIAGAAKAIGYFERSAIHWGKAEIRLGKLLFSHPRGHVFNAM
                     GVTTTVKNYTIENALSDVNTGLLFQGQTPISETSYFAPSDSRIGSRLIQIHDGEDLIM
                     AFNRVHDRYQHWLTQCSPAIDWSLRQERKNGARLLLPPLADWQRDVLNILGYGHIPSR
                     TLHPDVIYHLPKVEYSEFLNGTTSFGVCLSALDTARNILARLPSIGRSHRILYVPFPN
                     SYYGAIQNEERVIDLLQEHGVFLVDPKLPTADRINLFRKADVVIGPVGPGLTDIMFCR
                     RGTLLWEWMPWHHQNASFNRLAQAAEIDYWGDMFESDPDRREWVVDVDLLACRMSEIT
                     ERFAAGMFQTESAPAKVVGIRPLDEVLLAFESLGDNCEFGLVQRQGRAEPLGLFRFAG
                     MSLPKIVRALEARLSGIGTPETIKVFPVGDNREYMVRETWLDTSYH"
     gene            complement(1818..2006)
                     /locus_tag="VHX39_00585"
     CDS             complement(1818..2006)
                     /locus_tag="VHX39_00585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989644.1"
                     /translation="MNYILLAFARDFVPSVIHLEIAHEGLWLAVEYVPFGVMSIAAPV
                     LVFAATARRRWGMRQMPA"
     gene            complement(2757..3170)
                     /locus_tag="VHX39_00590"
     CDS             complement(2757..3170)
                     /locus_tag="VHX39_00590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989645.1"
                     /translation="MYAEQIGHQRRQALLGQQLVMQQTHHDRREARAILHRRGHVFGK
                     GRARLGAASPTNAGMRAVFGNDQRLRLRQVEHLPRGMAGGRRSGQGAAASRTCYGEMI
                     DGGIGVFCPAQRLSGMALLSAGLLAGSFTQAADPH"
     gene            3241..4005
                     /locus_tag="VHX39_00595"
     CDS             3241..4005
                     /locus_tag="VHX39_00595"
                     /inference="COORDINATES: protein motif:HMM:NF033517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HEX3989646.1"
                     /translation="MRDHVAVAPVKHMDETGFRIAGKTRWLHIASTIWLTFYRVTPKR
                     GSLMENVLGIVVHDHWKPYYTLKGVLHALCNAHHLRELQALIDIEKEDWARKMQRLLR
                     RACHAANLAGEQGATLSHRFTALIERCYDAILTEGFAFHEAQPALISTARKRNGRVPR
                     RTGHNLLRRLHGRKLDVLRFLSDPTVPFTNNLAERDGRMMKLRQRISGGFRSFEGAED
                     FAVIRSLLSTARKQGWDILQALASRPDHLIALLRTA"
     gene            4286..4993
                     /locus_tag="VHX39_00600"
     CDS             4286..4993
                     /locus_tag="VHX39_00600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_052642687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HEX3989647.1"
                     /translation="MPTPDPHSRHRFPAEIISHAVRLYHVFSLSLRDVELILSERGIV
                     VSYETVRRWCKKFAATLADRLRRRRPRLGDKWYMDEVFIRIQGEQHYLWRAVDQEGVV
                     LDILVQARRDGHAAKRFFKRLLTGLQYEPRVIATDKLRSYGVAQRQMLPGAEHRQSRY
                     LNNRAENSHRPTRRRERQMQRFKSSRQAQDFLSAHAFIYGHFRPRRDQLPAPDYRDIR
                     SHAFADWHQETTTKNAA"
     gene            5052..5188
                     /locus_tag="VHX39_00605"
                     /pseudo
     CDS             5052..5188
                     /locus_tag="VHX39_00605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611730.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(5379..5495)
                     /locus_tag="VHX39_00610"
                     /pseudo
     CDS             complement(5379..5495)
                     /locus_tag="VHX39_00610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611730.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT         1190 a         1691 c         1591 g         1023 t
ORIGIN      
        1 tgtgataact cgtatccagc caagtctctc ttaccatata ttcgcggttg tcaccgactg
       61 gaaatacctt gatcgtctca ggagttccga tacctgaaag cctcgcctcc aaggctctga
      121 cgatctttgg cagagacatc ccggcgaacc tgaaaagtcc cagcggttca gcacggcctt
      181 gcctttgaac caagccgaat tcgcagttat cgcccaggct ctcaaaggcc agcagcacct
      241 cgtcgagcgg cctgatgccg acgaccttag ccggtgcgga ttccgtctga aacatgccag
      301 ccgcgaaacg ctcggtgatc tcagacatcc ggcaagccag caagtcgaca tctacaaccc
      361 attcgcgccg gtcggggtcg ctttcgaaca tgtctcccca ataatcgatc tcggccgctt
      421 gcgccaaccg attgaatgag gcgttctgat gatgccacgg catccattcc cacaaaagcg
      481 tcccacgccg gcagaacatg atatcagtta gtcctgggcc aaccggcccg atcaccacgt
      541 cggctttgcg aaataggttg atgcggtccg ccgtcggcaa cttcggatcg accaggaaga
      601 cgccgtgctc ttgcagcaga tcgatcaccc gttcctcatt ttggatggcc ccgtaataag
      661 aattcgggaa tggaacgtac agaatccggt gcgaccttcc aatgctcggc agtcgcgcca
      721 ggatgttgcg cgccgtgtcg agggcactca ggcaaacgcc aaaactggtc gttccattca
      781 ggaactccga atactcaact tttggcaaat ggtagatgac atcggggtgc aaggtgcgac
      841 tgggtatgtg gccgtagccg aggatgttca aaacgtcccg ctgccagtcg gcgaggggcg
      901 gcagaagcag cctggcgccg ttcttgcgct cttggcgaag cgaccaatcg atcgccggac
      961 tgcattgtgt gagccagtgt tggtacctat cgtggaccct gttaaacgcc atgatcaggt
     1021 cttcaccgtc atggatttgg atcaatctgg agccaatgcg cgaatccgag ggcgcgaaat
     1081 aggaggtttc cgagatcggg gtctgccctt ggaacagaag gccagtgttc acatctgaaa
     1141 gggcattttc tatcgtgtag ttcttgactg tcgtggtcac ccccatggcg ttgaaaacat
     1201 gcccgcgggg atgcgaaaac aataacttgc caagccgaat ctctgcctta ccccaatgga
     1261 ttgccgacct ttcgaaatag ccgatcgcct tggccgcgcc ggcaatcggt tgcatcgaac
     1321 tctcatcgtg gccggacatg agagcgtttc tatcatctcg gaaggtcgat cagcaagcgt
     1381 tgccgcccag caatgccagg ggaatcgctt gaatgtctca cgcggtgcgc cgaatgattt
     1441 tctccggata gtcctgattc gagccggctc ctttacggcg gttctacagg cttgtgatcg
     1501 gcttggccta ggtcagcagg ttcatggtta catgcttgac gaatgccata ttggcgtgct
     1561 catggccgga gcgcaggcgg gcgaagtcat cctggtacac aacgtcgaga ccgtccagaa
     1621 ggtgggggga gaacaaagcc ggtaagtcac gcgaccttga tcgtccccct tccctgtgct
     1681 ccgcccagtc gggccaccca agctaatggc cgactgaccc cccaacattc tggactgtct
     1741 gtgctcttcg taaggaccgt ccggtgatgc tatattgtgg gtcgggggga ctgcgctggc
     1801 cgggaaggca agccccatca agcgggcatc tgccgcatcc cccaacgacg acgcgctgtg
     1861 gctgcgaaaa ctaaaactgg agcggcaata ctcatcaccc cgaagggcac atattccacc
     1921 gcgagccaaa gtccctcgtg cgcgatctcc aaatggatca ccgagggcac aaagtcacgc
     1981 gcaaaggcga gcaaaatata gttcatcccc acaaaccgca gccaacgcca atgcctcggg
     2041 cccagggtct ttgacagccc tccgaaagac aaggccgcca ataggtaggt ccagacggcc
     2101 ccgatcgcga agaaagctga gagcgggcca ggaaggggca ggtggttcaa aattcaacaa
     2161 agccagataa caaggccgat atgaaccaga tgtgccgcgg caaaggccag gccaaactct
     2221 cggccacgtc ctgacagtgg cgcaagcgca ggaccaaaca gcgtggccag agctccgccc
     2281 gcataggcca cccagaatag caggaatgac cagcgcgccg tcatccgcag cgccacccga
     2341 tgcactttgc atcggtccca ttgatggcaa gaacagccgc agccaatgcg aatgctaacc
     2401 caaacgccgc gcccatccac agggctggaa cagatttgcg cttcatcgtg tactcgattg
     2461 aagttccgta actgcctagg taccggatca ctaaccggcg cttgacgcgc gactcggggc
     2521 acgattcaag ctgccaatct cgccgccacc gcctggttcg cacgaaaaaa ccggtccgat
     2581 ttcgaaccac gtggcacgtc tggaagcgtt ggtctctgtc ctacaggcgc aaaacgccga
     2641 actgcggacg atggtagcgg cacagggtgt gcgtatcgcc gagttggaac gccagctcgg
     2701 attgaacagt tccaacagcg gcaaaacctc catccagcga tggtctgaca aagaagtcag
     2761 tgcgggtcag cagcctgcgt gaacgatccg gcaagaagcc cggcggacag aagggccatc
     2821 ccggaaagac gctgagccgg acagaaaacc ccgatgccac catcgatcat ttccccgtaa
     2881 catgttcggg acgcggcggc gccctgaccg gagcggcggc caccggccat accgcgcggc
     2941 aggtgttcga cctgcctgag cctcagcctt tgatcgtttc cgaacaccgc gcgcatgcct
     3001 gcgtttgtgg gagatgcggc accgagacgc gcgcggcctt tcccgaagac gtgaccgcgc
     3061 cggtgcaata tggcgcgcgc ctcgcggcgg tcgtggtgtg tctgctgcat taccagttgc
     3121 tgcccgagca gcgcttggcg acgttgatgg ccgatctgtt cggcgtacat ctggtgacgg
     3181 ccaccatcgc cggcatgagc cggagttgcg ccgtgcggtt cggggggttt cgccaccgcc
     3241 gtgcgcgacc atgtggcggt ggcaccggtg aagcacatgg acgaaaccgg cttccggatc
     3301 gctggcaaga cacggtggtt gcacatcgca tcgacaatct ggctgacgtt ttaccgggtc
     3361 acgccgaagc ggggcagcct gatggaaaac gtcctcggca ttgtggtcca tgatcattgg
     3421 aagccgtact ataccctgaa aggcgttttg cacgcgttgt gcaacgcgca tcatctgcgt
     3481 gagcttcagg cgctgatcga catcgagaaa gaagactggg cgcgcaaaat gcaacgtctg
     3541 ttgcgccggg cgtgtcatgc ggcaaacctc gcgggtgaac agggcgcgac gttgtcacac
     3601 cggttcaccg cgctgatcga acgatgttac gatgccattc tcacggaagg tttcgcattc
     3661 cacgaggcac aacccgctct gatctccacc gcccggaaac gcaacggccg cgtgccgcgc
     3721 cgcaccggac acaatcttct acgacggctc catggccgga agctggatgt gttgcgcttc
     3781 ttgtccgatc cgacggtgcc gttcaccaac aacctggcgg agcgggacgg acggatgatg
     3841 aaattgcgcc aaaggatttc cggcgggttc cggtctttcg agggcgcgga ggatttcgcc
     3901 gtcattcgat ccctgctttc gacagcgcgg aagcagggat gggacatctt acaggcactg
     3961 gccagccgcc ccgatcatct gatcgcgtta ctccgaaccg cttgatccag gcgcgcctac
     4021 ctggccagtt acgaagttcc cacatcatag ccataccgaa cggcgttcgc caccgacgcc
     4081 gctacaattg aatcgggggc atactgaggg gtcggcatag agggaccgac gccagcggcc
     4141 aggttgcatc tcaatgaata tcggccagtg cggcggccac aacgtgacct tcaccggggc
     4201 ctaccggcag gtgaagcagg aggccggtat cgtcacgcca atcgagcttg gcagaggcca
     4261 cggaggcggg tgagactgag gcatgatgcc aacgcccgac ccgcattccc gccatcggtt
     4321 ccctgccgag atcatcagcc atgctgtcag gttgtatcac gtgttcagcc tcagtctgcg
     4381 cgatgtcgag ctgatcctgt ctgaacgtgg catcgtcgtc tcctacgaga cggtgcggcg
     4441 ctggtgcaag aaattcgccg ctactctcgc cgaccgcctg cgacgccgcc gcccacgact
     4501 tggcgacaag tggtacatgg acgaggtctt catccgcatc cagggcgagc agcattatct
     4561 ctggcgcgcc gtggatcagg agggcgttgt gctcgatatc ctagttcaag cccggcgcga
     4621 tggccatgcg gcgaaacgct tcttcaaacg gctgctgacg ggtttgcaat atgagccgcg
     4681 ggtgatcgcg accgacaagc tgcgcagcta tggcgtcgcc cagcgtcaaa tgcttcctgg
     4741 cgccgagcac cgacagagtc gatatctgaa taatcgggct gagaattcac atcgaccgac
     4801 acgacgacga gagcgacaga tgcaacggtt caaatcgtcc cggcaagccc aggactttct
     4861 ttccgcccac gccttcattt acggtcactt ccgtccccgc cgagatcagc tgccagcccc
     4921 tgactaccgc gacatccggt cgcacgcctt tgctgattgg caccaggaaa cgaccaccaa
     4981 gaacgcagca taaccagatc ggtacgatga tccgcgccgt cacgccgccc aaactggatt
     5041 aacgtgacaa taccgtcgcc gaggctcgca ggctgatcgg gcaatatctg gatttctgca
     5101 acacaaagcg gccgcaatcg agccttggcg cgcaaacgcc ggaccaagcc tacttcatcc
     5161 gctgacgccc ttggcgatag cggcatgaat ttcgccgcgg ctgttgggtc gcctttccgg
     5221 tcgggctacg ccctccctgc acgacgatcc aacagccgca cgttacgcaa ccagccggcc
     5281 ggggatcgat ccacttagcg gaggcgaaac gctgtagcga acaagccgac cacctctgtg
     5341 ttgaaaatct cagggcggtc atagttggca agcgcttact cgaccgcgtc gatgcagaaa
     5401 tccacctcca tggtgatcga caggcgccag gccagaacac ggcgggtgaa ccaatccaca
     5461 accgccgcga ggtagacgaa gccgcgcgcc atcgg
//
LOCUS       DATAVD010000038         3027 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3540586, whole genome shotgun sequence.
ACCESSION   DATAVD010000038 DATAVD010000000
VERSION     DATAVD010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3027
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3540586"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1351)
                     /locus_tag="VHX39_00615"
     CDS             complement(<1..1351)
                     /locus_tag="VHX39_00615"
                     /EC_number="3.4.11.19"
                     /inference="COORDINATES: protein motif:HMM:NF009622.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminopeptidase"
                     /protein_id="HEX3989648.1"
                     /translation="MTTFHSAALDRAVETLPRNYAGPGGAVAVVREGEVVVRHSWGWA
                     NAEQRIAFTPRSLFRMCSITKQFTCGVVLEAFPDPSVLDDDIRARLPLLQQPAPGALH
                     LCHNQSGLRDYWAVAMLHGSPVEAPFGATEAARIIGATRSLHFTPGTRYSYCNQNFRI
                     LAELVEQHTGRSFAELLRDRIFDRAGMASALLAANTSAMPDGTIGYEGSPSGGFRAAE
                     NRILWTGDAGVGASLDDMIAWERFIDASRDGSDGLYRRLSGPVTFADGHPAGYGFGLS
                     RSTEFGRPLSGHGGALRGWRSHRMYLPSERISIVVVFNHMADPQAAAMDLLSAMLGEA
                     RQSPDVTILPPSWLGTYLEPETGLSVRIDAQSAGTVRLRYGHYPEQLELRADGSASNE
                     SGIGLRPSTDGLWMDRSRENWSTCLQPLEGVPATDIAGRYRCEELGTEAVVTDTSGVV
                     "
     gene            complement(1403..2752)
                     /locus_tag="VHX39_00620"
     CDS             complement(1403..2752)
                     /locus_tag="VHX39_00620"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX3989649.1"
                     /translation="MPATADFASACLAHFIETSRWEALPEVLRHEAKRSLLNFVGCAI
                     GVANTPPIDMAMRVLTRLSGADRVTVLGRRERLDPLGAAFINAIGGNLLDYDDTHLRT
                     VIHPTAPVAPAVLALAEQRGLSGADMLHAFVLGAEVECRIGNAVSPGHYARGWHITST
                     CGVFGSSAASAKLLRLDAEQTAHALGIAASQSAGSVENLPSGAKNVSVGNAARQGIFA
                     ALLAEQGYTAAPAAIEGALGWARAMGDVPAVAEITGDLGQRWELLANTYKPYPCGIVM
                     HAVIDACLELRRDHALTSAEVAEVIVSGDQLLLDRGDRVVSNDRDARVSIHHCAAVAL
                     LFGVAGVREFSEAVVHEPAVVALRELTRARLDASSPRGAATVLVRTHDGRALTATVLH
                     ARGSTERPLSDHEIAAKVRDLAADGGFQGSIDEVIAAVWQVDTMPTIAPLVGLLGRS"
     gene            complement(2752..>3027)
                     /locus_tag="VHX39_00625"
     CDS             complement(2752..>3027)
                     /locus_tag="VHX39_00625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989650.1"
                     /translation="QRTIRVADGWHGSRHTPEEVEPIVHRLRAARPEPGFTISMRVQW
                     NGMDFGALQEEIEGLEAVGVQHVMIAPQDRNIDDWDAVLEGVGRLAR"
BASE COUNT          591 a         1048 c          895 g          493 t
ORIGIN      
        1 aaaccacgcc tgaggtgtcc gtgacaaccg cctcggtgcc gagttcctcg caccggtacc
       61 ggccggcgat atcggttgcg ggcacgcctt caagaggctg taagcacgta ctccaattct
      121 cccgcgagcg atccatccac agtccgtctg tactgggccg caacccgatc ccgctttcgt
      181 tgctcgccga cccgtcggcg cgcagttcca gttgttccgg gtaatgacca taacgcaacc
      241 ggacagttcc tgccgattgt gcgtcaatgc ggaccgacag cccggtctcc ggctcgagat
      301 aagtgccgag ccaggacggc ggcaaaatcg ttacgtcagg cgattgtcgt gcctccccca
      361 acatcgcgct gagcaaatcc atcgctgcag cctgcggatc tgccatgtga ttgaacacca
      421 cgacgatcga gatgcgctct gacggcaaat acattcgatg gctccgccag ccccgcaagg
      481 cgccgccatg gccagacagc ggacgtccga actcggtcga ccggctcagg ccaaatccgt
      541 aaccggccgg gtggccatcg gcgaacgtca ccggaccgga caaccggcgg tacagcccgt
      601 cggagccatc ccgcgacgcg tcgatgaaac gctcccaggc gatcatgtcg tccaggctgg
      661 caccgacccc agcgtcgccg gtccagagaa tgcggttttc ggcggcgcgg aagccgccgg
      721 atggcgagcc ctcgtagccg atcgtcccgt ccggcatggc gctggtgttc gcagccagca
      781 atgcactggc cattccggcg cgatcgaaaa ttcgatcacg taacagttca gcgaaactgc
      841 ggccggtatg ctgctccacc agctccgcca atatgcgaaa gttctggttg cagtaggaat
      901 accgggtgcc cggcgtgaaa tgcaacgacc gtgtggcgcc gatgatccgg gcggcctcgg
      961 tcgcgccgaa cggcgcctcg accggtgaac cgtgcagcat cgcgacagcc caatagtcac
     1021 gcaggccaga ctggttgtgg cacaaatgca gtgcgccggg cgccggttgc tgcaacagcg
     1081 gcagacgggc gcgaatgtca tcgtccagca ccgacgggtc gggaaaagcc tccagtacca
     1141 cgccacatgt gaactgcttg gtgatcgagc acatgcggaa caacgagcgc ggggtgaagg
     1201 cgatgcgttg ctcggcattg gcccaacccc agctatggcg aaccaccacc tcgccctctc
     1261 tcaccaccgc aaccgcgcct cctgggccgg cataattgcg aggaagggtc tcgacagcgc
     1321 gatcgagggc agcggaatgg aacgtcgtca tggcgtgact ttcgcgccgc cgcggttaaa
     1381 tcgcaacgcg caggatccag cgtcaactac ggccgagcaa cccgaccaac ggcgcgattg
     1441 ttggcattgt gtcgacctgc caaaccgccg caatcacctc gtcgatggaa ccctgaaacc
     1501 cgccatcggc cgccagatcg cgtaccttcg cagcaatctc atggtccgat agcggccgtt
     1561 ccgtactgcc cctggcatga agcacagttg cagtcagcgc ccgcccatca tgggtgcgga
     1621 ccaacacggt cgcagcacca cgagggctgg aggcatcaag ccgcgcccgg gtcagttccc
     1681 gcaatgcaac gaccgccggt tcgtgcacca ccgcttcgga aaattcccgc actcctgcca
     1741 caccgaacag caatgcgacc gcagcacaat ggtgaatgct gacgcgcgcg tcccggtcat
     1801 tgctgaccac ccggtcgccc cgatcgagca acaactgatc gccggatacg atgacttctg
     1861 cgacctctgc cgacgtcagc gcatggtctc gccgcaactc cagacaggca tcgatcaccg
     1921 catgcataac gatcccgcaa ggatacggct tgtaggtgtt cgccagcagc tcccaccgct
     1981 gacccagatc gccggtaatc tctgcaacag ccggcacgtc acccatggcg cgcgcccaac
     2041 ccagcgcacc ctcgatcgcg gccggagcag ccgtgtatcc ctgttccgcc agcaacgctg
     2101 caaaaatccc ctgccgcgcc gcgttcccca cacttacatt cttcgctcca ctgggcaggt
     2161 tctccacgga accggcggac tggctggcgg caatgcccaa agcatgtgcg gtttgctctg
     2221 cgtccagccg cagcagcttc gccgatgctg cagacgagcc gaacacgccg caggtcgagg
     2281 taatgtgcca gccgcgggcg taatggccag gtgataccgc attgccgatc cggcactcga
     2341 cctcggcgcc gagaacgaac gcgtgcagca tgtccgcgcc gctcagccct cgctgctccg
     2401 ccagagccag cacggccggc gcaaccggcg ccgtcggatg gatgaccgta cgcaaatggg
     2461 tgtcgtcgta gtccagcagg ttcccgccaa ttgcgttgat gaacgccgca ccaagtggat
     2521 cgagccgttc gcggcgcccc aacacggtca cacgatcggc accggacagt cgcgtcagga
     2581 cccgcatcgc catgtcgatc ggcggcgtat ttgcgacgcc aatggcgcaa ccgacaaaat
     2641 tcagcagcga tcgcttcgct tcatgccgca gcacctctgg caaagcttcc caccgcgatg
     2701 tctcgataaa gtgggcaagg catgcgctgg cgaagtcggc ggttgccggc attaacgtgc
     2761 cagccggcca acgccctcga ggacggcgtc ccagtcgtcg atgttgcgat cctgcggggc
     2821 gatcatgacg tgctgcacgc cgaccgcttc gaggccttcg atttcctcct gcagcgcgcc
     2881 gaaatccata ccattccatt gcacgcgcat ggagatcgtg aacccgggct ccgggcgggc
     2941 cgctcgcagc cggtgcacga tgggctcgac ttcctcgggg gtatggcgcg agccatgcca
     3001 gccatcggcc acccggatcg tgcgttg
//
LOCUS       DATAVD010000039         4996 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3716, whole genome shotgun sequence.
ACCESSION   DATAVD010000039 DATAVD010000000
VERSION     DATAVD010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4996
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3716"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1271
                     /locus_tag="VHX39_00630"
     CDS             <1..1271
                     /locus_tag="VHX39_00630"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEX3989651.1"
                     /translation="VVLRGLGLPPESLELLRQILLLALTLCGITIVWMPSDSEAPSVL
                     SPRRAAFRVLVSFALLLVWLLFLTQATKAALSLLVIGAMPIGLYVLRNAAARVTRGQW
                     LLQDDDVSAVSAIADRCMQALVVVAAAFAMIEIWQIDMATVASSETPMTRLGRGTFEA
                     LVILVGADLLWLVVRAVIDVRLTGTVLQVDDLDDEGLRRRARIRTLLPVLRNFLFIFV
                     LIIASLSALSAMGLQIGPLLAGAGVVGIAVGFGAQTLVRDVLSGVFFLLDDAFRVGEL
                     IESGGISGTVETFSLRSVKLRHYRGQLHTVPFGDLKAITNYSRDWVNELLDVTVVYEA
                     DLARVERTIERVSGEAMHDRSFAGRVISAPASIGVTAMGADGIHVGIMVRTRPGQQFR
                     VRAAMFSRLKSAFDADGIRFSGTGAAELPE"
     gene            1497..2633
                     /locus_tag="VHX39_00635"
     CDS             1497..2633
                     /locus_tag="VHX39_00635"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX3989652.1"
                     /translation="MSSSVPPETGAINDLTDDGEPLREMPEAEPVHFSSDPLVVLQTA
                     QFTLLLIGALYLTRTIVLPIVLAILLKLLLQSGVRRLERIHIPRAIAALLMITILFVT
                     LVSMGTALSGPAHDWVVKLPDSLPRLRERLSFISGSVATVQHFLQNAERYISFSTSQV
                     APAAPTTSGLSEVLFAGTASFASGLFMTVVVLFFLLVSGDLFLRRLVEVLPRFRDKRA
                     AVMITQQIESNIAAYLKTITIMNASVGVATGLMAWALGLDNPTLWGVLAFVLNYIPVI
                     GPIICLVILVLAGMLETASLWRSLLPAACFLAIHLIEGQFVTPMLVARRFTLNPVLVI
                     VSLIFWYWMWGVPGAILAVPVLAIIKIICDGIPPWAAVGHLVEG"
     gene            2654..3244
                     /locus_tag="VHX39_00640"
     CDS             2654..3244
                     /locus_tag="VHX39_00640"
                     /EC_number="1.-.-.-"
                     /EC_number="1.6.99.-"
                     /inference="COORDINATES: protein motif:HMM:NF014573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEX3989653.1"
                     /translation="MRVLVIYCHPDKTSFAGAVHQAVTEGLAASGHAVTDLDLYGDGF
                     SPIFTLQDRSKYFDTAAYFKSVEPYASQLADAEGLVVIYPAWWYGMPAMLKGYFDRVW
                     APGVAYDVKPGGKIDTSRLAHLRRIAVVTTYGGPWWFVRLVMGDPARKLFNRGIRNLC
                     AHGCTLDWHAHYNMDRAPRKQLQRFLAHVKRRMVRW"
     gene            complement(3255..>4996)
                     /locus_tag="VHX39_00645"
     CDS             complement(3255..>4996)
                     /locus_tag="VHX39_00645"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3989654.1"
                     /translation="GDPTAFGRECRDVGRDRERFVAAQGVQMILEWSREADVVVIGAG
                     AMGLPAAIAAREAGASVIVLEAEHDIGGHAITSGGNVPLGGGTTAQQQHGIEDSPDLL
                     FRDLTDWSVVEPNGFPDYRYNDHEIIRAFADNCVATYDFLVAHGVVFVDQAPDARGGN
                     AVGNSVPREMHAAVMHWPMVQTGKPADPVVQATTSSGNGLMRPLEVAARRAGVEILLR
                     HRMVALHREAPNAGRVLGVAVQTESATFNIRARKAVIIATGGSTGNVNFRRMFDPRLT
                     EEYCGLAGMPWSDQDASGEIAAMAIGASLWGLYNQAGEFGYSITKPAAVGCQYGYQNL
                     RWMPGSAVFDRARAIGLRVADWQDVITVNMLGHRFYDETGTGFTTNNYNSINPYVPGS
                     YLNAKNIKYSPRNWLNAAMAGIGDGRNGGGPIWAIFDADAVARENWRPAPPYVDADAG
                     FFFSAGSIAELASKIEMQYQRVKMPADNLVDTVARYNSFVGSGIDEDFGKPRPSHKIS
                     TPPFYAAWATPVIHDTRAGLRINAHCQVMDMQGQVIPGLYCGGESAGGFSQHGLARAT
                     CQGVIAGRHSVAG"
BASE COUNT          845 a         1523 c         1577 g         1051 t
ORIGIN      
        1 ttgtggtgct gcgagggctg ggcttaccac ccgaaagtct ggaactgctg cgtcagattc
       61 tgctgttggc gcttacattg tgcggcatca cgatcgtctg gatgccgagt gacagcgagg
      121 cgccgagcgt gctcagcccg cgacgagccg ctttccgggt gctggtgtcg ttcgccttgc
      181 tgctggtctg gctgctcttc ctaacccagg ccaccaaggc cgcattatcg ctgctggtga
      241 tcggtgcgat gccgatcggt ctgtatgtgt tgcgcaatgc cgctgcacgg gtcacccgcg
      301 gccagtggct gctgcaggat gacgatgtct ccgcggtcag cgccatcgca gatcgctgca
      361 tgcaggcgct ggtggtggtc gcagccgcct tcgcaatgat cgaaatctgg cagatcgata
      421 tggccacggt tgccagcagt gagacgccga tgacgcggct cgggcggggc acgttcgagg
      481 cgctggtgat cctggtcggc gccgatctgc tgtggctggt ggtgcgtgcg gtgatcgatg
      541 tgcggctgac cggcacggtg ttgcaggtcg acgatctcga cgacgagggc ctgcgcaggc
      601 gagcgcgcat ccgcaccctg ttgcctgtgc tgcggaattt cctgttcatc ttcgtgctga
      661 tcatcgcctc gttgagcgcg ctgtctgcga tgggactgca gatcgggcca ttactggccg
      721 gtgccggggt ggtcgggatc gcggttgggt tcggcgccca gacgctggtg cgcgatgtgc
      781 tgtccggggt gttcttcctg ctggacgacg cgttccgcgt cggcgagttg atcgagagcg
      841 gcgggatcag cggcacggtc gaaacgttct cgctccgatc ggtcaagctg cggcactacc
      901 gaggtcaact gcacaccgtg ccgttcggcg acctgaaggc gatcaccaac tattcgcgtg
      961 actgggtcaa cgaattgttg gacgtgacgg ttgtgtatga ggccgatctc gcgcgggtgg
     1021 agcggaccat cgagcgggtc tcgggcgaag cgatgcacga ccggtcgttc gccggtagag
     1081 taatttctgc gccggcgtcg atcggtgtga ccgcaatggg ggccgacggg atccatgtcg
     1141 ggatcatggt ccgcacccgg ccgggccagc agttcagggt gcgtgcggcg atgttcagcc
     1201 ggttgaaatc ggcgttcgat gcggacggga tacggttttc cggcacgggc gccgccgaac
     1261 tgcctgagtg aggccgcgga ccttcattgc gggctatgcc caggcagcgc gccggaaatg
     1321 gaacatatcc gtccagccgg cgttgcagtc atcggaccgg gcgtcggaga cagtgtgatg
     1381 catttaatga ccacgacccc gcagggtttc gaacctgggc agaccggtgc ggtgggattg
     1441 cccgcgcgtg acggcgttca cgtccaggcc ggccggtaac atcgtcatct gttgcgatgt
     1501 cgtcctccgt tccgcccgaa accggcgcga tcaacgattt aaccgacgac ggcgagccct
     1561 tgcgtgaaat gcctgaggca gagcctgtgc atttctcctc cgacccgctg gtggtgttgc
     1621 agacagccca gtttacgctg ctgttgatcg gtgcgctgta tttgacgcgc acgatcgtgc
     1681 tgccgatcgt tctggcgatc ctgctgaaac tgctgttgca atccggggtg cggcgactgg
     1741 agcggatcca tatcccgcgg gccatcgccg ccctgctcat gatcacgatc ctgttcgtca
     1801 cgctggtgtc gatgggcacc gcgctctccg gaccggcaca cgattgggtg gtgaaactgc
     1861 cggatagcct gcctcggctg cgggagcggc tcagtttcat cagcggatcg gtcgcaacgg
     1921 tgcagcattt cctgcaaaat gccgagaggt acattagttt ctcgacctcg caggtggcgc
     1981 ctgcggcacc gacgacatcc ggtctgtcag aggtgctgtt tgccggcacc gcgagttttg
     2041 ccagcggcct gttcatgaca gtcgtcgtgc tgttcttcct gctggtatcc ggcgacctgt
     2101 tccttcgaag gcttgtcgag gtactgccgc ggttccgtga caagcgggcg gccgtgatga
     2161 taactcagca aatcgagagc aacattgcgg cctacctgaa gacgatcacg atcatgaatg
     2221 cgtcggtcgg cgtggcaacg gggctcatgg catgggcgtt ggggctcgac aacccgacgc
     2281 tttggggcgt tctggccttt gtcctcaact atattccggt gattggcccg atcatttgcc
     2341 tggtcatttt ggtgctggca ggcatgttgg agacggcatc gctctggcgt tcgttgctgc
     2401 cggcggcatg ctttttggcc attcacctga tcgaagggca attcgttacg ccaatgctgg
     2461 tcgcccggcg attcacattg aatccggtcc tggtcatcgt ttccttgatc ttttggtact
     2521 ggatgtgggg cgtgcccggc gccattctgg cggtacctgt cctcgccatc atcaaaataa
     2581 tctgcgacgg aatcccgccc tgggctgccg ttggtcacct cgtcgaaggt tagcacgtcg
     2641 tgggtcaggc tacatgcggg tactggtgat ctattgccat ccggacaaaa cgagtttcgc
     2701 cggcgccgtg catcaggcag tcaccgaggg acttgctgca tcaggtcatg ccgtgacgga
     2761 cctggatctg tatggcgatg ggttcagccc gatcttcacc ctgcaagacc gcagcaaata
     2821 cttcgatacg gcggcctatt ttaaatcggt cgagccttat gcctcgcaac tggcggacgc
     2881 tgaaggcctt gtcgtgattt atccggcctg gtggtatggc atgccggcaa tgctcaaagg
     2941 ctattttgac cgcgtctggg ctcccggcgt tgcctatgac gttaaacccg gcggcaagat
     3001 cgacaccagt cgtttggccc atttgcgacg catcgccgtg gttaccacgt acggcggccc
     3061 atggtggttt gtccgcctcg ttatgggtga tcccgcgcgg aaactgttca accggggtat
     3121 ccgcaactta tgcgcccacg gctgcacgtt ggactggcac gcccattaca atatggaccg
     3181 tgcaccgcgc aaacaactgc aacggttcct tgcgcacgta aagcgccgga tggtgcgttg
     3241 gtgacggatc cgcgttaccc ggcaaccgag tgccgtccgg caataacacc ctgacaggtc
     3301 gcgcgcgcca gaccgtgttg gctgaacccg cctgccgatt cgccaccgca ataaagtccc
     3361 ggaatcacct gaccctgcat atccatcacc tggcaatgcg cattgatgcg taagcccgcg
     3421 cgcgtgtcgt ggatgaccgg cgtcgcccat gcggcgtaga atggaggggt ggagattttg
     3481 tgcgaaggcc ggggttttcc gaagtcctca tcaatgccgg acccgacgaa cgaattgtac
     3541 cgcgccacgg tgtccaccaa attgtccgcc ggcattttga cgcgttggta ttgcatttcg
     3601 atcttactcg cgagttcggc aatgctgccg gcgctgaaga agaagccggc atcggcgtcc
     3661 acataaggcg gtgccggcct ccagttctcg cgagccaccg cgtcggcgtc gaagatagcc
     3721 cagatcggac cgccgccatt acggccgtcg ccgatccctg ccatcgccgc attgagccag
     3781 ttgcgcggac tgtacttgat gtttttcgcg ttcaggtaac tgccgggaac atacggattg
     3841 atcgagttgt aattgttggt ggtgaacccg gtgccggtct cgtcataaaa ccggtgcccg
     3901 agcatgttga ccgtgatcac atcctgccag tcggcgacac gcaatccaat ggctcgcgcg
     3961 cggtcgaaca cggcactgcc gggcatccag cgcaaattct gatagccata ctgacagcca
     4021 accgcggccg gcttggtgat gctgtaacca aattcgccag cctgattgta caacccccac
     4081 aacgaggcgc cgatcgccat tgcggcgatc tcgccactgg cgtcctgatc cgaccagggc
     4141 attccggcga ggccgcaata ttcctcggtc aaccgcggat cgaacatgcg gcggaagttg
     4201 acatttccgg tcgagccgcc ggttgcgata atcaccgcct tccgggcacg gatattgaat
     4261 gttgcactct cggtttgcac cgccacaccg agtacgcggc cggcattcgg tgcctcgcga
     4321 tgcaacgcaa ccattcggtg ccgcaacagg atttccaccc cggcgcgtcg cgctgcaact
     4381 tccagcggcc gcatcaggcc attgcccgag gacgtcgtcg cctgcactac cggatcggcc
     4441 ggtttgccgg tctgcaccat cggccagtgc atcacggcgg cgtgcatttc gcgcggcacc
     4501 gagttgccga ctgcgttccc tcccctggca tcaggcgcct gatcgacgaa gaccacgccg
     4561 tgtgcgacca gaaaatcata ggtcgccaca caattgtcgg cgaacgcgcg gatgatttcg
     4621 tgatcgttat agcggtagtc gggaaacccg ttcggttcaa ccaccgacca atcggtcagg
     4681 tcgcggaaca acaggtcggg cgagtcctcg atcccatgct gctgttgcgc agtcgtgccg
     4741 ccgccaagag gcacgttgcc gccgctggtg atggcatggc cgccgatgtc gtgctcggct
     4801 tccaggacga tcaccgatgc gccggcctcg cgcgccgcaa tcgctgccgg cagccccatg
     4861 gcgccggcac cgatcaccac gacgtccgcc tcgcggctcc attccaggat catctgcacg
     4921 ccctgggcgg cgacgaaccg ctcgcggtcg cggccaacat cgcgacactc ccgaccaaat
     4981 gccgtcgggt caccct
//
LOCUS       DATAVD010000040         4173 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3168239, whole genome shotgun sequence.
ACCESSION   DATAVD010000040 DATAVD010000000
VERSION     DATAVD010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4173
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3168239"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..254)
                     /locus_tag="VHX39_00650"
     CDS             complement(<1..254)
                     /locus_tag="VHX39_00650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989655.1"
                     /translation="MPLQTIPRPNLSTNWLERLWSSIADRGRDFANVPAASLPAGVRV
                     RRLAEALLSGRGEASGAALARELVEALNALPQADRLAFCK"
     gene            complement(337..1941)
                     /locus_tag="VHX39_00655"
     CDS             complement(337..1941)
                     /locus_tag="VHX39_00655"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3989656.1"
                     /translation="MISRRSLLGSAAIAAASPVVPASAAGGGTLRIAMTAADIPTTHG
                     IPNNGFEGVRFLGYQPYDALVNWDLRNNPDKPANITPGLFTAWHPDETNPLKWTFTVR
                     QGVKFHDGTDFNADAVIWNLRRIYDEKSPQYDAQSAPVVKAVISMVDTFEKVDESTIV
                     MTTKYPFSFLPWVLIRVFIVSPTQWEVTGKNWAEFAKKPMGTGPFKIVRVVPGQYVEM
                     DRNADYWDKARIPKLEKLFVYPMPEATTRVAALRSNQVDWIEVPAPDSLPSLKAAGYN
                     VILWPYPHTYPYVLNTLEDSPFHDVRVRRAINYAIDREGLCKLINDTAKPAVGLYKPG
                     DKYFGEPTEKYNFDPGKARALLKEAGYGPDQPLKAKIMISTSGSGQMLPIPMNEFVQQ
                     NLKEVGIELEFDVVEWGTMLVAVRSDPKAPQSHGVHGINISLSSIEPSTMFRYYAIDS
                     FSPTNFNWGHFANEKATALLKQAQATFDEAEQTRLLAQAHAIVVDDAAWFFMCHDLNP
                     RAMSAKVHGFQPVQSWFVDLTTITMA"
     gene            complement(1954..3558)
                     /locus_tag="VHX39_00660"
     CDS             complement(1954..3558)
                     /locus_tag="VHX39_00660"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3989657.1"
                     /translation="MMLSRRGLIAAATAAAGFPAIPGEAASPQILRIGMTAADLPTTH
                     GIPNNGGEGFRFLGYPAYDSIVNWDFSHTDKLADITPGLFTAWHADETNPNRWVCTVR
                     ENVTFHDGSAFDADAVIWNFGRVYDDQSPQYDAPAAPIVRATLSMIDKYEKADAKTIV
                     LTTKFPFSFLPYILPRLLIVSPTQWEAVGKKWSEFAKSPSGTGPFKITKVVLGQYAEM
                     SRNEAYWDKTRIPKLDKMVVYPMPEATTRVAALRSGQVDWIEVPPPDAIPSLKQAGLQ
                     ISLWPYPHTYPYALNCMDSSPFKDVRVRQALNYAIDRDGMCKMLNGTAIPASGLYPEG
                     DPIFGKPKNHYTYDPERAKALLKEAGYGPDKPVKAKIMISTSGSGQMVPIPMNEFMQQ
                     NFKAVGMDIDFDVVEWGTMLVAVRNPPTSPLAHGDDGINISLSYTDPSSMFRYYATDS
                     FSPINYNWGHWANEECTALLRKAQATFNPEEQTELLAKAHTIVVDEAPWLFIVHDLNP
                     RAMSPKVHGFKPAQSWSQDFTQITMA"
     gene            complement(3647..>4173)
                     /locus_tag="VHX39_00665"
     CDS             complement(3647..>4173)
                     /locus_tag="VHX39_00665"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HEX3989658.1"
                     /translation="SDAVRQAGGLVVYIQNTFDDVAVRTWSTFFDHFCSPERRARMIE
                     AFSPGSEGHALWPGLDVEPADLQVRKRRFGAFAPGASDLHAILQDRGIDTLIVTGTAS
                     QVCCESTARDAMMLNYKVFFIADGNATFTDEEHNATLSAMAHTFCDVVDTATIVDLIQ
                     AASIAAKTAEPALA"
BASE COUNT          811 a         1198 c         1264 g          900 t
ORIGIN      
        1 tgtttgcaaa atgccaatcg gtcggcttgt ggcaaggcat tcagggcctc caccagttcg
       61 cgcgccaacg cggcgcccga ggcttcgccg cggccgctga gcagcgcttc tgccagccgg
      121 cgcacgcgca cgccggcggg cagcgacgcc gcagggacat tggcgaagtc acggcctcga
      181 tcggcgatcg agctccagag acgctccagc caattggttg agaggttggg gcggggtatg
      241 gtctgcaatg gcaatttcgg ctcacctcga atgagggggc cagaataacc cgaggttttg
      301 accttgcgcc accgtcatgg cgcgggcgcg gtccgctcag gccatggtga tcgtcgtcag
      361 atcgacgaac cagctttgca ccggctggaa cccatgcacc tttgccgaca tcgccctcgg
      421 attgaggtca tggcacatga agaaccacgc ggcgtcgtca accacgatcg catgcgcctg
      481 cgccagcagc ctggtttgct cggcctcatc gaaggtggct tgcgcctgct tcaacagcgc
      541 tgtggctttt tcgttggcga agtggcccca gttgaagttg gtcggcgaga aactgtcgat
      601 cgcgtaatat cggaacatgg tcgagggttc gatcgaactc aggctgatgt tgatgccatg
      661 aacgccatgg ctttgcggcg ccttcgggtc actgcgcacc gccaccagca tggtacccca
      721 ctcgaccacg tcgaactcga gttcgatgcc aacttccttg aggttttgtt gcacgaactc
      781 attcatcggg atcggcaaca tctggcccga tcccgaggtc gagatcatga tcttcgcctt
      841 caacggctgg tccgggccat aaccggcttc cttaagcaga gccctggcct tgccgggatc
      901 gaagttatac ttttcggttg gttcgccaaa atacttgtcg ccgggtttat acaatccgac
      961 ggcaggcttc gcggtgtcgt tgatcagctt gcaaagtcct tcgcgatcaa tcgcataatt
     1021 gattgctcgc ctgacccgca catcatgaaa cggtgagtct tccagcgtgt tgagcacgta
     1081 cggatacgta tgggggtagg gccagaggat aacgttgtag ccggccgctt tcagcgaggg
     1141 tagcgaatcc ggcgccggca cttcaatcca gtcaacctga ttcgagcgca aagcggcgac
     1201 ccgggtcgtc gcctcgggca tcggatatac gaacagtttc tcgagtttcg gaatgcgtgc
     1261 tttatcccag tagtccgcat tgcgatccat ctctacatac tgcccaggaa ccacccggac
     1321 gattttgaaa ggtcctgtgc ccatcggctt tttggcgaat tcagcccagt ttttgccggt
     1381 gacctcccat tgggtgggac tgacgataaa gacgcggatc agtacccagg gcaggaagct
     1441 gaacggatat ttcgttgtca tgacgatggt cgactcgtcg accttttcaa aggtatcgac
     1501 catggaaatg acagccttga cgaccggggc cgattgcgca tcgtattgcg gcgacttttc
     1561 gtcatagatc cgacgcaggt tccagatgac cgcgtcggcg ttgaagtcgg tgccatcgtg
     1621 gaatttcacg ccctgccgaa cggtgaaagt ccatttcagc gggtttgtct cgtctggatg
     1681 ccacgcggtg aacagccccg gagtgatatt tgcgggcttg tccggattgt tccgcaaatc
     1741 ccagttcacc agcgcgtcat atggctgata gccgaggaac cgcacaccct cgaacccgtt
     1801 attgggaatt ccgtgcgtgg tcggaatatc cgctgcggtc attgcaatcc gtaacgtacc
     1861 gccgccggca gcggaggccg gcaccacggg cgaagctgcg gcaatcgccg cactgccgag
     1921 caggctgcgt ctggaaatca tgggaagcac gccttatgcc atggtgatct gggtaaagtc
     1981 ctgtgaccag ctttgcgccg gcttgaaacc gtgaacctta ggcgacatcg cgcgcggatt
     2041 gagatcgtgc acgatgaaca gccacggcgc ctcgtcgaca acgatggtat gggctttggc
     2101 cagcagctcg gtttgttctt ccggattgaa tgtcgcctgg gcctttcgca acaacgccgt
     2161 gcactcttcg ttggcccaat gaccccagtt gtaattgatg ggagagaagc tgtcggtggc
     2221 ataatagcgg aacatcgagg acggatcggt ataactcagg ctgatgttga tgccgtcatc
     2281 gccgtgtgcc aggggcgagg tcgggggatt acgcactgcc accagcatgg tgccccattc
     2341 gacgacgtcg aagtcgatgt ccatgccgac ggctttgaaa ttctgctgca tgaattcgtt
     2401 catcgggatc ggcaccatct gaccggatcc cgacgtcgag atcatgatct ttgctttcac
     2461 cggtttgtcc ggtccatagc cggcttcttt cagcagggct ttggcgcgct ccggatcgta
     2521 ggtgtaatgg ttcttcggct tgccgaagat cgggtcgcct tccgggtaca atccgctcgc
     2581 cgggatcgct gtgccgttca gcattttgca catgccgtca cggtcgatcg cgtagttaag
     2641 cgcctgccgg acgcgcacat ccttgaacgg cgaactgtcc atgcagttca acgcgtacgg
     2701 ataggtgtgc ggatacggcc aaaggctgat ctgcaggccg gcttgtttca aagacggaat
     2761 tgcgtccggt ggcgggacct cgatccaatc cacctggccg gagcgtaacg cggcaacccg
     2821 cgtggtggct tccggcatcg gatacaccac cattttgtcg agtttgggta tgcgggtctt
     2881 gtcccaatag gcttcattac gcgacatctc ggcgtattgg cccagtacca ctttggtgat
     2941 tttgaacgga ccggtaccgg acgggctctt tgcgaattcc gaccatttct tcccgaccgc
     3001 ttcccactgg gtggggctga cgatcagcaa acggggcagg atgtacggca ggaagctgaa
     3061 cgggaatttc gtcgtcagca cgatcgtctt cgcatccgcc ttctcgtact tatcgatcat
     3121 cgacagcgtc gcccgcacga tcggtgctgc cggcgcgtcg tattgcggag attggtcgtc
     3181 atagacccgg ccgaaattcc agatcaccgc atcggcgtcg aatgcggagc cgtcgtggaa
     3241 cgttacgttc tcgcgaaccg tgcaaaccca gcggtttgga ttggtctcat cggcgtgcca
     3301 cgcggtgaac agaccaggag tgatatcggc cagtttatcg gtgtggctga aatcccagtt
     3361 cacaattgag tcgtatgcgg gatagccgag aaaccggaag ccctcgccgc cattattggg
     3421 aataccatgc gtggtgggca aatccgccgc agtcatgccg atccgcagaa tttgcggtga
     3481 ggcggcctct cccgggattg cggggaatcc ggcggcggcg gtcgccgcgg ctatgagacc
     3541 acgcctggag agcatcatgt cgatcctgtg ctgaaaacgc gttgtgccgg aaaagccgcg
     3601 ccggctggca cgaagcgggc ggcttcgtat cggaatgttg caaggcttat gccaacgcgg
     3661 gttccgcggt tttcgctgcg atcgatgcag cctggatcag atcgacgatc gttgccgtat
     3721 cgacgacatc gcaaaatgta tgggccatcg ccgaaagcgt ggcgttatgt tcctcatccg
     3781 taaaggttgc gttgccgtcg gcaatgaaga acaccttgta gttcagcatc atggcatcgc
     3841 gagcggtcga ctcgcagcaa acctgcgacg cagtgccggt gacgatcagc gtatcgatcc
     3901 cacggtcttg caggatcgca tgcaggtccg acgcaccagg cgcgaatgcg ccgaaccgcc
     3961 gcttccggac ctgcaaatct gcgggctcga catccaatcc aggccacaag gcgtggccct
     4021 cgctgcccgg cgagaaggct tcgatcattc gggcccggcg ctctggcgag cagaagtggt
     4081 cgaagaaggt cgaccacgtt cgaacggcga cgtcgtcgaa ggtattctgg atgtagacca
     4141 ccaggccgcc ggcctgacgg acggcatcgc tga
//
LOCUS       DATAVD010000041         5685 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3541066, whole genome shotgun sequence.
ACCESSION   DATAVD010000041 DATAVD010000000
VERSION     DATAVD010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5685
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3541066"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..722)
                     /locus_tag="VHX39_00670"
     CDS             complement(<1..722)
                     /locus_tag="VHX39_00670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEX3989659.1"
                     /translation="MSASLPKLHRRALPFDPLIVLWVVLAAALVLLVVNPLFRLVQTS
                     LQDTDTGAFTWMNYVTAYSRPRYLVAMLNSLRLGAGVTVLCLLFAVPMAWAVSRTDMP
                     GKGLIRFLVLGAFVTPPYLGAIAWILLAGPNSGWLNRVWMAVTGAHEGPFNIYTFSGL
                     TFNIAIYSFPYLFIFTTAALDLVSSEMEDAANILGAGVMRTTLRVTLPMVLPAIVGGA
                     IVTFLEAIALFGSPALIAIPAR"
     gene            complement(830..1867)
                     /locus_tag="VHX39_00675"
     CDS             complement(830..1867)
                     /locus_tag="VHX39_00675"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3989660.1"
                     /translation="MSKKLTRRRAAAGLAAVVAIPKHGRAADETTLVAGAKSDGTLTW
                     YIAQVDAQSAENLGRSFTQHYPGVNVGVIRTTGQVAYQRLLLDIKNHVPQCDVFSTTD
                     IAHMPILKERHELAEYKVANADALLPAFKALSDPGYSYITNAARYFLIYNKDKVKPED
                     VPRAWTDMLDPKWKGRVATGHPAFSGCTGTWALGVKKVHGWEFFEKLAKNNPRIGRSA
                     VDPMTLINAGECLVGVGAANNAYASIDKGNPIGVVHPSDGLVLCVTPSAIPAKAPHPQ
                     AARLFMEWLLSPDYARLIAADGSEPILTGVPPRSGMPPLADQKIISLTVDEIRVGVPQ
                     VIEQWRDTFGS"
     gene            1992..2315
                     /locus_tag="VHX39_00680"
     CDS             1992..2315
                     /locus_tag="VHX39_00680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989661.1"
                     /translation="MSMDEDAWREGLRAKGRDWVLAELNMRPGLPQDPLLDVVYVSPY
                     PTREFCQRWCVESDNQYLRLSGYTKFVLCGVAILGIFIAMAMYKWSSVAPARLPTAPT
                     HGVQE"
     gene            complement(2359..3399)
                     /locus_tag="VHX39_00685"
     CDS             complement(2359..3399)
                     /locus_tag="VHX39_00685"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3989662.1"
                     /translation="MTLLNRRFLLAGAGALTMAGSFRAHAAGITPDLIAAAKKEGSVT
                     WYIAQVDTATAEMMGSAFTTQFPGVKVSVIRTTGQVAYERLLQDLKNDAPQCDVFSST
                     DPAQYPALKKRGYLANYTPAGAATLLPAFAKVSDPGYMYPSSATAHVLIYNSIQVKEA
                     EAPKAWTDLLDPRWKGRVATGHPAFSGCTGIWALALTKKYGWSYFEKLAKNNPRIGRS
                     GNDPVTLINAGECLVGPAPGNTAFQQVDKHNPIVPVYPTDGATLCLGPSSVLASAPHP
                     HAARLFMEWLMSDAFSKLSVANHGDPVHPGVALTSGQKPLDQVPILSLTVAEIAKGVP
                     DIIEKWRDTFGS"
     gene            complement(3409..4443)
                     /locus_tag="VHX39_00690"
     CDS             complement(3409..4443)
                     /locus_tag="VHX39_00690"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3989663.1"
                     /translation="MPVITRRTMGAGLGAVVMTAGRGARADLPALETAARAEGTVTWY
                     VAQMSGEAAEAMGHRFTRRYPGIAVSVIRTTGQVAYERLSQELKNNTPSCDVFSSTDI
                     SQYPALIRRNALAHYEPVNAAELAASYRGLGEKGFYYPTTGSLQILIYNTKTVTGADI
                     PTRCTDLLDRKFNHRVAVAHPAFSGYFGQWVLAMRRLYGWSYFEKLAANNPRVGRSGN
                     DPITLLNAGECVVGTGPASTSTVIARRGNPIGIVYPEDGTVLTVGPSAVIASAPHPNA
                     ARLFMEWLLSSDYADACRDWSLEPVRADAAPLPGMKPISEIKTVSLTAAEIARDLPGA
                     IEQWRDTFGN"
     gene            complement(4513..4671)
                     /locus_tag="VHX39_00695"
     CDS             complement(4513..4671)
                     /locus_tag="VHX39_00695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989664.1"
                     /translation="MASHAPARYTGPETIEALTADRQRMWGTFTSMTTGTVIFLVLLL
                     IAMAFFLL"
     gene            complement(4787..5569)
                     /locus_tag="VHX39_00700"
     CDS             complement(4787..5569)
                     /locus_tag="VHX39_00700"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF017522.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TylF/MycF/NovP-related O-methyltransferase"
                     /protein_id="HEX3989665.1"
                     /translation="MNLPILTPPDAGTLQNFFFPVFWGVTDQDVVTSLARAVTERVHP
                     GFHFADNFLTWGRNNSMFEDAPFVRAWRDNIDSDSDFAIVWRRYILACAGYHAVQLDG
                     DFVECGCYRGVGVKTVVDYLGGTAFPRTFWGYDLFEHSADMEHHAMADHGPGLADVVR
                     AKFAAYPQVNIVQGAIPAVFAGQSPDRIAYLHIDLNQATAEIAALDALFDRVVPAGIV
                     ILDDYEWAGVYRRQKLSEDPWFTARGYRVMPLPTGQGLVIKR"
BASE COUNT         1084 a         1926 c         1690 g          985 t
ORIGIN      
        1 aagcgtgcgg gaatggcgat cagcgccggc gagccgaaca gggcgatggc ttccaggaag
       61 gtgacaatcg ctccgccaac gatcgccggc agcaccatcg gcagggtgac gcgcaacgtg
      121 gtgcgcatca cgccggcgcc caggatgttg gcggcatcct ccatttccga tgaaaccaga
      181 tcgagcgccg ccgtggtgaa aataaacaga tacggaaacg agtagatcgc gatgttgaag
      241 gtcagcccgc tgaacgtata gatgttaaac ggtccttcat gcgcgccggt caccgccatc
      301 cagacccggt tgagccagcc ggaattcggc cccgccagca ggatccaggc gatggcgcca
      361 agatacggcg gcgtgacgaa ggcccccagg accaggaacc ggatcagacc cttgcccggc
      421 atgtcggtgc gcgacaccgc ccaggccatc ggcaccgcga acagcaggca cagcaccgtg
      481 acacccgcgc ccagccgcaa cgaattcagc atcgccacca ggtagcgcgg ccgcgaatac
      541 gccgtgacgt agttcatcca ggtgaacgcg cccgtatcgg tatcctgcag actggtctgc
      601 accaggcgga acagcggatt gaccaccagc agaaccaagg cggcggccaa gacgacccac
      661 aaaacaatca gcggatcgaa cggaagggcg cgacggtgca gtttgggcag gctcgcgctc
      721 aaggcggtgg ccgaacgctt ggcatgggcg gcaattgtcg tgtcatggct tcctctgtgc
      781 cgaagttaaa cggccggatg tcggctgacc aggggccatg cgccgaaggt caacttccga
      841 acgtgtcccg ccactgctcg atcacctgcg gcacgccgac gcgtatctcg tccaccgtca
      901 gcgaaatgat cttctggtcc gccagcggcg gcatgccgga tcgcggcgga accccggtca
      961 agatcggttc gctgccgtcg gccgcgatca accgtgcgta gtccggactc aacaaccact
     1021 ccatgaacag gcgcgcagcc tgcggatgcg gcgccttcgc cgggatcgcc gagggcgtga
     1081 cgcacagcac caggccatcc gatggatgca cgacgccgat cggattgccc ttgtcgatcg
     1141 aggcatacgc attgttcgca gcacccacac cgaccaggca ctccccggcg ttgatcaagg
     1201 tcatcgggtc gaccgcggat cgcccgatcc gtggattgtt ctttgccagt ttctcgaaaa
     1261 actcccagcc atggactttc ttcacgccca gcgcccaggt gccggtacaa ccggagaacg
     1321 ccggatgccc ggtcgccacc cgacccttcc atttcgggtc caacatgtcg gtccaggcac
     1381 gcggcacgtc ctcgggcttc accttgtcct tattatagat caggaaataa cgcgccgcgt
     1441 tggtgatgta ggagtatcca gggtccgaca gcgccttgaa tgccggcagc aaggcatcgg
     1501 cgttggccac cttgtattcg gccagttcat gccgctcctt caggatcggc atatgggcga
     1561 tatcggtggt gctgaacacg tcgcactgcg gaacgtggtt cttgatgtcc agcagcagcc
     1621 gttgatacgc cacctgcccg gtcgtccgga tcaccccgac atttaccccg ggataatgtt
     1681 gggtgaacga acggcccagg ttttccgccg actgcgcgtc cacctgggcg atgtaccagg
     1741 tcaacgtgcc gtcgctcttg gcgcccgcca caagtgtcgt ctcatccgct gctcggccat
     1801 gtttcgggat cgcgacaacg gccgccagtc ccgcggcggc gcgccggcgt gtcaatttct
     1861 tggacattgg tttcctccag ctcgaatgtt acgcacgctc gcgccgatag ctcaacagca
     1921 cctcgccgtt cacgcttcac catgcagcgc cacccatgct aaatcggccg cacgcaatcg
     1981 gaggtgatgc catgtccatg gacgaggatg cgtggcggga agggttgcgg gccaagggac
     2041 gcgactgggt gctggccgag ttgaatatgc gcccgggcct gccgcaggac ccgctgcttg
     2101 atgtcgtcta cgtatcgccc tatccgacga gggaattctg ccagcgctgg tgcgtggaat
     2161 ccgacaatca gtacctgcgt ctttccggct acaccaagtt tgtcctctgt ggcgtggcga
     2221 tcctcgggat ctttatcgcc atggccatgt acaaatggtc gtcggtggca cccgcgaggc
     2281 tgccgaccgc accaacacac ggcgtccagg aatagcgccc ggggcccgat cccgcggcaa
     2341 tacccgcgaa ccggcggctc aactgccgaa tgtatcgcgc cacttctcga tgatatccgg
     2401 cacgcccttg gcgatttccg ccaccgtcag cgacaggatc ggcacctggt ccagcggctt
     2461 ctggccggac gtcagcgcca cccccggatg caccggatcg ccgtgattgg cgaccgatag
     2521 tttcgagaac gcgtcgctca tcagccattc catgaacagc cgagcggcat ggggatgcgg
     2581 cgcgctggcc agcaccgagg acggtcccag gcacagcgtg gccccatccg tcggatacac
     2641 cggaacgatc gggttatgct tgtccacctg ctggaacgcg gtgttccccg gcgccggccc
     2701 caccaggcat tccccggcat tgatcagagt gaccggatcg ttgccggacc ggccgatccg
     2761 aggattgttc tttgcaagtt tctcaaagta actccagcca tatttcttgg tcagcgccaa
     2821 tgcccagatg ccggtgcagc cgctgaacgc cggatgcccg gtggcgaccc ggcccttcca
     2881 gcgtggatcc agcagatcgg tccaggcttt cggcgcctcc gcctctttca cctgaatgct
     2941 gttgtagatc agcacatgcg ccgtcgcgct ggacggatac atataccccg ggtcggagac
     3001 cttcgcgaac gccggcagca gcgtcgccgc gcccgccggc gtgtaattcg ccaggtagcc
     3061 gcgcttcttc agcgccgggt actgcgcggg atcggtcgag ctgaaaacgt cgcattgcgg
     3121 cgcatcgttc ttcagatcct gcaacagacg ctcataggcg acctgcccgg tggtgcggat
     3181 caccgacacc ttcacgccgg gaaactgcgt ggtgaaagcg ctgcccatca tctccgcggt
     3241 cgcggtgtct acctgggcga tataccaggt gacagacccc tcctttttcg ctgccgcaat
     3301 caggtccggc gtgatgccgg cagcatgggc tcgaaacgaa cctgccatgg tcagtgcgcc
     3361 ggcacccgcc agcaggaagc gtcggttcaa cagcgtcatg ttcaatcctc aattgccaaa
     3421 tgtatcgcgc cactgctcga tcgcgccagg caaatcccga gcaatctctg ccgcggtcag
     3481 ggacaccgtc ttgatctcgc tgatcggctt catccccggc agcggcgccg cgtccgcgcg
     3541 caccggctcc agcgaccagt cgcggcacgc atcggcgtaa tcgctgctca gcagccactc
     3601 catgaacagc ctggcggcgt tgggatgcgg cgccgaggcg atcaccgcgg acggccccac
     3661 cgtcagcacc gtcccatcct cgggatagac aatgccgatc gggttgcccc gccgcgcgat
     3721 gacagtcgat gtgctggccg gcccggtccc aaccacacat tcgccggcat tcagcaaggt
     3781 gatcggatcg ttgcccgacc ggccgacccg cggattattg gccgccaact tctcaaaata
     3841 gctccacccg tacaatcggc gcatcgccag cacccactga ccgaaatacc cgctgaacgc
     3901 cggatgcgcg accgcgaccc ggtggttgaa cttccggtcg agcaaatcgg tgcagcgggt
     3961 cgggatatcc gccccggtca ccgtcttcgt gttgtagatc aggatctgca acgacccggt
     4021 ggtgggataa taaaacccct tctcccccag cccccgataa gacgccgcga gttccgccgc
     4081 gttcaccggc tcataatgcg ccagcgcatt gcgcctgatc agtgccggat actgcgagat
     4141 gtcggtcgaa ctgaacacgt cacaactcgg cgtattgttt ttcagctcct gcgacagccg
     4201 ctcataggca acctgtcccg tcgtgcggat gaccgacacc gcgatcccgg gataacgccg
     4261 ggtaaaccga tgccccatcg cctcggccgc ctcgccgctc atttgcgcga cataccaggt
     4321 aacggtgccc tcggcccgag cggcggtctc cagggccggc agatcggcgc gcgcgccacg
     4381 cccggcggtc atcacgaccg ctcccagacc ggcgcccatg gttcggcgcg ttatgaccgg
     4441 cattcacccc tccccgttga cgtaacgcta cggcaactcg ggggcgatgg gaaccgccgg
     4501 cgatcgattc gcctacagca ggaagaacgc catcgcgatc agcagcagca ccaggaagat
     4561 gacggtgcca gtggtcatgg aggtaaacgt cccccacatc ctctgccggt ccgccgtcag
     4621 ggcttcgatg gtttcgggtc cggtgtaacg ggcaggggcg tggctggcca tggtatccct
     4681 cgggtcgcga gaatgttcca ctcgttctat gccacgccgc cctccccata caagaggctg
     4741 atccggcgcc ctgttcggcc cccgaaccag ccccgtgtca gacgtttcag cgcttgatca
     4801 ccagcccctg tccggtcggc agcggcatca cccggtagcc ccgcgccgtg aaccaggggt
     4861 cctcgctgag cttctgccgg cgatacaccc cggcccactc ataatcatcc aggatgacga
     4921 tcccggccgg cacgacgcga tcgaacaagg catccagcgc cgcgatttcc gccgtcgcct
     4981 ggttgaggtc gatgtgcaga taggcgatcc gatccggcga ttgaccggcg aaaaccgccg
     5041 gaatggcccc ctgcacgata ttcacctgcg gatacgccgc gaatttcgca cggaccacgt
     5101 cggccagccc tggaccatgg tccgccatgg catggtgctc catgtccgcc gagtgctcga
     5161 acagatcgta cccccagaat gtgcgcggaa acgcggtgcc cccaaggtaa tcgaccaccg
     5221 tcttgacgcc gactccccgg taacagccgc actcgacgaa atcgccatcc aactgcaccg
     5281 cgtgatagcc ggcgcaggcc aggatgtacc gccgccacac gatggcgaaa tccgaatccg
     5341 aatcgatgtt gtcccgccag gcccgaacga acggcgcgtc ctcgaacatc gagttgttgc
     5401 gcccccacgt gaggaagtta tccgcgaaat gaaaccccgg atgaacccgt tcggtgaccg
     5461 ccctggccag gctggtgacc acgtcctggt cagtgacacc ccagaacacc gggaaaaaga
     5521 agttctgcaa cgtgcccgca tcaggcggcg tcaggatggg caggttcatt ttgagcctcg
     5581 ctatacggtc ggcggaccgt tcgcacccaa cactggcagc gaatagttaa cgagatatga
     5641 acgcccgcgg ggaaggtcgg cccactggcc ggcaactcct ggctc
//
LOCUS       DATAVD010000042         3987 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1679758, whole genome shotgun sequence.
ACCESSION   DATAVD010000042 DATAVD010000000
VERSION     DATAVD010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3987
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1679758"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            219..1679
                     /locus_tag="VHX39_00705"
     CDS             219..1679
                     /locus_tag="VHX39_00705"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HEX3989666.1"
                     /translation="MLFHTTAFILEFLPVCLAGFFLLGRFLDAKWALVWLVLCSLFFY
                     SWWNPEHLPLLVGSVALNYAIARILRRTARPRAWLTAGIATNLALLGWFKYADFLLHI
                     VAPHATALHITLPLAISFFTFQQIMFLVDTAKARAARQETVPPFLTYATFVTFFPHLI
                     AGPIVRPSEIIPQLAARDLGRPCIDNFADGLLIFLLGLGKKLVLADMFGGFADIGFNA
                     AARGASLTFFEAWYASLAYALQIYFDFSGYSDMAIGLARMMNIRFPLNFDSPYQATNI
                     AEFWRRWHMTLGGFLRDYLYIPMGGNRTGPIRQTRNLMLTMLLCGLWHGAAWNFVIWG
                     GLHGLLIVIHKQYRRVFPPLPAPVAQALTLFAVVLAWVPFRAATFASTVTVLRGMAGL
                     NGIVLPRMIVSALPALARFADPVTVLPYLGDARTLSFPELSACLLLGWLIVLAMPNIH
                     RMTQRTRHWSLTGSFALSVQALFFAPHVAPFLYFQF"
     gene            1679..2641
                     /locus_tag="VHX39_00710"
     CDS             1679..2641
                     /locus_tag="VHX39_00710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989667.1"
                     /translation="MGRIALACAASLIIYIGAFACLLERPLTLGALRTHIEATIALAR
                     TIHEPKLVILAGSNGPYSHRCEVIGPIVGRPCINAGVAVGVGLDYLFARWKPLLHPND
                     IVYLPMEETQYVRPRAASDLGPDATIMLRHDHATLWTMPLRRQIAALFAADLRAAIMS
                     LIETALVDGGFHDPRVAADGGFNIWGDHIGHTAALAAVNQSTLDVIVPVHHTAAEIRD
                     GYGSAEITGFLRWARQHGVRAIGGLPTGFADSPISEDSVAAIRTIYSDQGADFLELPN
                     NSDYPRTDFFDTQDHLNEEAQIAHSKAIGAALRPLMGREWARSR"
     gene            complement(2610..3185)
                     /locus_tag="VHX39_00715"
     CDS             complement(2610..3185)
                     /locus_tag="VHX39_00715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989668.1"
                     /translation="MRLSWLIVVPWLLLSGGVVVAGPQAFDLHLDVPPIVADSKAPAS
                     CTVTYLIDDTANNDVFAERMRIASAETDTPINNRMPCPANVPPRVGERALDACQSRAG
                     DPKQCVFADMARGFQREPNIDNTSEIASRCSSDKFSDIGVACWMSGKLSVCDVGCGNS
                     PKEAVAQAQARCSEKQQHSCPVTATVPIPGP"
     gene            complement(3185..3841)
                     /locus_tag="VHX39_00720"
     CDS             complement(3185..3841)
                     /locus_tag="VHX39_00720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989669.1"
                     /translation="MNPRRIAMLLMLAASPALMGPVSTWPALAQQVPATAGPSAEPVE
                     RILLPPPIQWDNGMLNFSPALPQTARDFANLTGGLAFGMSPAQVNALLPDPYPGLAWS
                     DLPLANEYPGEVRYFGVTLDRAGPLRMDPVGCTGAGSYLVLLFTSNGLFRLSYRLIAD
                     KNCTDTNAAAQSIFARFVPITQAIAMSTRYRTGNANVVEVTDPTVAYMASVRWRRVSN
                     "
BASE COUNT          693 a         1396 c         1160 g          738 t
ORIGIN      
        1 aagcgggatg cggcaacgat cacgggaaac cccttcaggg accgtcaacc gaacggcccg
       61 accagaacgt ctgatgaaca gcaagtatca taccaggacc gctaatgcca gtaattcaat
      121 catttaacgt cacatacatg agtattctgt aaaaggggcc gacagaccgc cattaaccat
      181 tcattatctg tttcggcgta cattgtcgct cacacgccat gctgtttcat accaccgcat
      241 tcatacttga attcctccca gtctgcctcg ccgggttttt tctgcttggt cgtttcttag
      301 acgctaaatg ggcgctggtt tggctggttc tgtgcagcct gttcttctat tcctggtgga
      361 atccggagca tctgccgctg ctggtcgggt cggtcgcgct caattacgcc attgcccgaa
      421 tactacggcg gaccgccagg ccccgcgcct ggctcacggc cggaatcgcc acaaacctgg
      481 cactcctcgg ctggttcaaa tatgccgatt tcctgctgca cattgtcgcc ccgcacgcaa
      541 cggcgctgca tatcaccctg ccgctggcga tcagcttctt caccttccag cagatcatgt
      601 tccttgtgga tacggcgaaa gcgcgagccg cccgacagga aaccgtcccg cccttcctca
      661 cctacgccac tttcgtcacc ttcttccccc acctgatcgc cggcccgatc gtccgcccgt
      721 cggaaatcat cccgcaactg gccgcccgcg atctcggccg cccttgcatc gacaatttcg
      781 ctgacgggct gctgatcttc ctcctcggtc tcggcaagaa actcgtgctg gccgatatgt
      841 tcggtggttt cgccgatatc ggcttcaacg ccgccgcacg cggcgcgagc ctgacgtttt
      901 tcgaggcctg gtacgccagc ctcgcctacg ccctgcaaat ctatttcgac ttctccggct
      961 actccgacat ggccatcggc ctcgcccgga tgatgaacat ccgctttccg ctgaacttcg
     1021 acagtcccta ccaggccacc aacatcgccg agttctggcg tcgctggcac atgaccctcg
     1081 gcggcttcct gcgcgattac ctctacatcc cgatgggcgg caaccggacc ggacccatcc
     1141 gccaaacccg caacctgatg ctgaccatgc tgctctgcgg cctgtggcac ggggcggcgt
     1201 ggaacttcgt catctggggc gggttgcacg gcctgctgat cgtcatccac aaacagtacc
     1261 gccgtgtatt cccgcccctg ccggcgccgg tcgcccaggc cctgacgctg ttcgcggtcg
     1321 tcctcgcctg ggtgccgttc cgagccgcca ccttcgccag cactgtgacg gtgctgcgcg
     1381 gcatggccgg cctcaacggt atcgtcctgc cgaggatgat cgtctccgcg ctgccggccc
     1441 tcgccagatt cgccgatccg gtcaccgtgc tgccctacct cggggacgcc cgcaccctca
     1501 gcttccccga gctctccgcc tgcctgctgc taggctggct gatcgtcctg gccatgccga
     1561 acatccaccg gatgacccag cgaacccggc actggagcct gaccggcagc ttcgcgcttt
     1621 cggtgcaggc actgttcttc gcgccgcatg tggccccgtt cctgtacttc cagttctgat
     1681 gggccgcatc gcgctcgcct gcgccgcatc gctcatcatc tatataggtg cgttcgcctg
     1741 cctgctggaa cggccgctga ccctgggcgc actccgcacc catatcgagg cgaccatcgc
     1801 gctcgcgcgg accatacacg aaccgaaact ggtcatcctg gcaggatcga acggcccgta
     1861 ttcgcatcgc tgcgaagtca tcgggccgat cgtcggtcgc ccctgcatca atgccggcgt
     1921 cgctgtcggt gtcggcctcg actatctgtt cgcccgctgg aagccgctgc tgcatccgaa
     1981 cgacatcgtc tatctgccga tggaagagac ccagtacgtc cgcccgcgcg ccgcctccga
     2041 cctggggccg gacgccacga tcatgctgcg ccacgaccac gcgacgctat ggaccatgcc
     2101 cctgcggcgg cagatcgcgg ccctgttcgc cgccgacctg cgtgcggcga tcatgagtct
     2161 gatcgaaacc gccctggtcg acggcggctt ccatgacccc cgcgtcgccg ccgacggcgg
     2221 cttcaatatc tggggcgacc acatcggcca caccgccgcg ctcgccgccg tcaaccagtc
     2281 cacactggac gtgatcgtgc cagtgcacca caccgccgcc gagatccgcg atggctacgg
     2341 ttcggccgag atcaccggct tcctgcgctg ggccaggcag cacggtgtca gggcgatcgg
     2401 cggtctgccc accggcttcg cggattcacc catctccgaa gacagcgtgg cagcgatccg
     2461 cacgatctac agcgaccaag gagcggactt cctggaactg ccgaacaaca gcgattatcc
     2521 gcgcaccgac ttcttcgaca cccaggatca cctgaacgag gaggcgcaga tcgcccactc
     2581 caaggcgatc ggtgcggcgc tgcgcccgct catgggccgg gaatgggcac ggtcgcggtg
     2641 accggacaac tatgctgctg tttctcggag caacgggcct gagcctgcgc gacagcctct
     2701 ttcggtgaat tgccgcagcc gacgtcgcac accgacagct tgcctgacat ccagcaggcc
     2761 acgccgatat cggaaaactt gtcggaggag cagcgcgacg cgatctccga cgtgttgtcg
     2821 atgttcggtt cgcgctggaa gccccgcgcc atatccgcga agacgcattg tttcggatcg
     2881 ccagcccgcg actggcaggc gtccagcgcg cgctcaccaa cccgcggcgg aacattcgcc
     2941 ggacaaggca tgcgattatt gatcggcgtg tcggtttcgg ccgaggcgat ccgcattcgt
     3001 tcggcgaaca cgtcgttgtt ggcggtatcg tcgatcagat aggtcacggt gcaactcgcc
     3061 ggcgccttgc tgtccgcgac gatcggggga acatccagat gcaggtcgaa cgcctgcggc
     3121 ccggcgacca ccacgccgcc ggacagcaga agccacggca ccacgatcag ccaggacagc
     3181 cgcatcaatt gctgacccgg cgccagcgga cggacgccat ataggcgacg gtcggatcgg
     3241 tcacctccac cacatttgcg ttgccggtgc ggtagcgcgt gctcatggcg atggcctggg
     3301 taatcggcac gaaccgggcg aaaatcgatt gcgccgctgc attcgtatcg gtgcagttct
     3361 tgtcggcgat cagccggtag gacagccgga acagaccgtt gctggtgaac agcaggacaa
     3421 gatagctgcc cgccccggtg cagccgacgg gatccatccg gagtggtccc gctcgatcga
     3481 gcgtcacgcc gaaataccgc acctcgccgg gatactcgtt ggccagtggc aggtcggacc
     3541 aggccaggcc ggggtaggga tcgggcagaa gcgcgttcac ctgagccggc gacatgccga
     3601 aggcgaggcc gccggtcagg ttggcgaaat cccttgccgt ctgcggcagc gccgggctga
     3661 aattcagcat cccgttgtcc cattggatcg gcggcggcag caggatccgc tcgaccggtt
     3721 cggccgacgg accggcggtg gcaggaacct gctgtgccaa agccggccaa gtcgataccg
     3781 gccccatcaa cgccggactg gccgccaaca tcagcagcat cgcgattcgg cgcggattca
     3841 tcggtcggtc tactccacgg cggcaggccg gcgcactcta tccgccgccg gtcggctatg
     3901 gaagttgccg cattccccgc gaacggccac ttccatgcgg acgaagatgc ggcgacgcat
     3961 tgaaatcgca cgccgcagac cgcatat
//
LOCUS       DATAVD010000043         2907 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3895, whole genome shotgun sequence.
ACCESSION   DATAVD010000043 DATAVD010000000
VERSION     DATAVD010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2907
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3895"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..485
                     /locus_tag="VHX39_00725"
     CDS             <1..485
                     /locus_tag="VHX39_00725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007282674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar M-ring protein FliF C-terminal
                     domain-containing protein"
                     /protein_id="HEX3989670.1"
                     /translation="GTIDAKGQFQPRPKAELDRITDLVKSAVGFDAKRGDKVTVETMH
                     FIPPSAAFDEAEAIASGGMQSWLLPVGGAIVVLLVAGAAVFVMRRRRGPVVDRVNAVI
                     DVVAQAGQDAIASLAAPEPLLLTNDENRAAAMLNNIFDTNPEEAVALLRAWIAEGTPS
                     "
     gene            482..1174
                     /locus_tag="VHX39_00730"
     CDS             482..1174
                     /locus_tag="VHX39_00730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989671.1"
                     /translation="MSRRFLPPPLAGFYASSEVDEARTLADMRDQGFADGHSVGRKQG
                     YEAGFMEGAAEIRAALQPELDALRESSGNRERRVGVADALRRVLAARDADLAAVERAS
                     RELASAALQALFPTLLATAVGSEITAVLADVLAERAPETLVVRAHPETLATIAAETAA
                     ERDAGRLTPEAVPDMPFGMAEAAWSGGGVTFDPAGLLARVTSVLAAASQNTVASLAVA
                     RLPETEELNAVS"
     gene            1171..1446
                     /locus_tag="VHX39_00735"
     CDS             1171..1446
                     /locus_tag="VHX39_00735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliM/FliN family flagellar motor switch protein"
                     /protein_id="HEX3989672.1"
                     /translation="MSETRSPIAEDRLASVMDIPVTLSVVLGAQAISLGKLYGLSRGS
                     VIVFDKQVGEPVDIFVNDRLVARGEVQLTDDGRLAVAMTEIASSGLA"
     gene            1476..2342
                     /locus_tag="VHX39_00740"
     CDS             1476..2342
                     /locus_tag="VHX39_00740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HEX3989673.1"
                     /translation="MTPGVASGDWGTSGIWLRAGLVALLLLLPHSAALAQSVSINLNS
                     GTGDVGGDSLGGHSMASNVISILALTSVLALAPGILVMGTSFTRLVVVLSMLRTALGL
                     QSSPPNTVIVSLALFLTAFIMGPTFETAYRDGLQPLMQGSITQEQGLDRTVKPFRSFM
                     EANVSNKDLALFVDLSGWKPPASPATAIDPTQPDPGAGPSANGVRDQLPLRVLCSSFL
                     VSELSKAFQIGFLLFLPFLVIDIAVSAILMGMGMMMLPPIVVSLPIKLVFFVLVSGWE
                     LVAGSLVRSFVT"
     gene            2339..>2907
                     /locus_tag="VHX39_00745"
     CDS             2339..>2907
                     /locus_tag="VHX39_00745"
                     /inference="COORDINATES: protein motif:HMM:NF026192.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989674.1"
                     /translation="MSATETQQPPAAMPAARSAPGTDLVRRSEALDKAAIVLMTMDQA
                     RVQQIFSRLDDEEIRRVSRAMTNLGRTDGDLVTQTVAEFQSALGRAGSLVGSAHNTER
                     MLRQVLPPQKAAEIIQDISGGRGSMVWEKLTQTTPEVLAGYLGNESAQTAAVVLAKLP
                     AQYAAQVLALLPDVAEVALRIVRTKALQNT"
BASE COUNT          470 a          924 c          972 g          541 t
ORIGIN      
        1 acggcaccat cgatgccaag ggccagttcc agccgcgccc caaggcggag ctggaccgca
       61 tcaccgacct ggtcaaatcg gctgtcgggt ttgatgcgaa acgcggtgat aaggtcactg
      121 tcgagacgat gcacttcatc ccgccgtcgg cagcgttcga cgaggcggag gcgatcgctt
      181 cgggtggtat gcaatcctgg ctgctgccgg tcggtggcgc gatcgtcgtc ttgttggtgg
      241 ccggcgcggc ggtgttcgtc atgcgccgtc gccgcgggcc ggtggtcgac cgtgtcaacg
      301 cggtgatcga tgtcgtggcg caggctggcc aggacgccat cgccagcctg gcggcaccgg
      361 aaccgctgtt gctgaccaat gacgaaaacc gtgccgcggc aatgctcaac aacatcttcg
      421 acaccaatcc ggaagaggcg gtggcgctgc tgcgcgcctg gatcgccgaa ggcacgccgt
      481 cttgagccgc cgcttcctgc cgccgccgct ggctggcttc tatgcgtcct ccgaggtcga
      541 tgaagcccgg acattggccg acatgcggga ccaggggttc gcggatggcc acagtgtcgg
      601 ccggaagcag ggctacgaag ctggcttcat ggagggtgct gcggaaatcc gggccgcgtt
      661 gcaacccgaa ttggacgcgt tgcgggaaag ctcgggcaac cgcgaacggc gggttggcgt
      721 ggctgatgcc ctgcgccgcg tgctggctgc ccgcgacgcc gacctcgcgg ctgtggaacg
      781 ggcgtcgcgg gaactcgcct cagcggcgct ccaggccttg ttcccgacct tgctggcgac
      841 tgccgtaggc tcggagatca ccgccgtgct cgccgacgtg ctggccgagc gtgcgcccga
      901 gacgctggtc gtgcgggccc atccagaaac actggcaacg atcgcggccg agaccgccgc
      961 ggaacgggac gctggccggc tgaccccgga agcggtgccc gacatgccat tcggaatggc
     1021 ggaagccgcc tggagcggtg gcggcgtcac gttcgacccc gctgggttgc tcgcgcgcgt
     1081 cacctcggtg ctggcagcgg cgagccagaa cactgtcgca tccctcgccg tagcccgcct
     1141 cccggaaaca gaggagttga atgcagtctc atgagtgaaa cccgcagtcc gatcgccgaa
     1201 gaccgactgg cctcggtcat ggatatccct gtcacgctca gcgtcgtcct cggcgcccag
     1261 gcaatctcgc tgggaaagtt gtacggcttg agtcgcggct cggttatcgt gttcgataag
     1321 caggttggcg agccggtgga catttttgtc aacgaccggc tggtggcgcg gggcgaggtc
     1381 cagttgaccg acgacggacg cctcgcggta gcaatgaccg agattgcctc ctcgggcctg
     1441 gcctgatgtt tttccggacg cctgacagga gtggcgtgac cccgggcgtt gcttccgggg
     1501 attggggcac gtccgggatt tggctgcgtg ccggcctcgt cgcattgctc ttgctgctgc
     1561 cgcactcggc ggctctggcg cagagcgtgt cgatcaattt gaactcgggt accggtgatg
     1621 tgggcggcga tagtctcggc ggccatagca tggcctccaa cgtcatcagc atcctggccc
     1681 tcacctcggt gctggcgctg gcgccgggca tcctggtgat gggtacgtcc ttcacccgtc
     1741 tcgtggtggt gctgtcgatg ctgcgcaccg cattgggcct gcaatcgtcg ccgcccaata
     1801 cggtgattgt gagcctcgca ctgttcctga cggcgttcat catgggaccg acatttgaaa
     1861 cggcgtaccg cgacggattg cagccgctga tgcagggcag catcacccag gaacagggcc
     1921 tggatcgaac cgtcaaaccg ttccgcagct tcatggaagc caatgtcagc aacaaggacc
     1981 ttgcgctgtt cgtcgacctg tccggctgga aaccgccggc ctcgcccgcg accgccatcg
     2041 acccgaccca accggacccg ggcgccggcc cgagcgccaa cggcgtgcgc gatcagttgc
     2101 cgctgcgtgt gctttgctcc tcctttcttg tcagtgagct gtcgaaagcc ttccaaatcg
     2161 gcttcctgct gttcctgccg ttcctggtca tcgacattgc agtgtcagcc attctgatgg
     2221 gcatgggtat gatgatgctg cccccgatcg tggtcagtct gcccatcaaa ttggtgttct
     2281 tcgtcctggt cagcggttgg gaactggtgg ccggatctct ggtacggagt tttgtcacgt
     2341 gagcgcgacc gagacccagc aaccgccagc cgccatgccc gcagctcgtt ccgcacctgg
     2401 caccgatctg gtcaggcgct cggaggccct ggacaaggcc gcgatcgtcc tgatgacgat
     2461 ggatcaggcc cgcgtgcaac agatcttctc gcggctcgac gatgaagaaa tccgccgggt
     2521 gagccgtgcg atgacgaatt tgggtcgcac cgacggcgat ctggtgaccc agacggtggc
     2581 cgagttccag tcggcgcttg gccgcgccgg cagtctcgtt ggctcggccc acaacacgga
     2641 acggatgctg cgccaggttt tacctccgca aaaggcagcg gagatcattc aggacatctc
     2701 cggcggccgt ggcagcatgg tctgggagaa actgacgcaa accacgcccg aggtgttggc
     2761 tggctacctg ggcaatgaat cggcgcaaac ggccgccgtc gtgctggcga aattgccggc
     2821 gcagtatgct gcgcaggtgc tcgccttgct gcccgacgtc gccgaggttg cgctgcggat
     2881 cgtgcgcacc aaagccctgc aaaacac
//
LOCUS       DATAVD010000044         3057 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2424020, whole genome shotgun sequence.
ACCESSION   DATAVD010000044 DATAVD010000000
VERSION     DATAVD010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3057
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2424020"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..427)
                     /locus_tag="VHX39_00750"
     CDS             complement(<1..427)
                     /locus_tag="VHX39_00750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989675.1"
                     /translation="MGDWKTLLAVPRFRALWVALLCANLGSWSVLAALPILVAERYGA
                     GGALVLSLSWRILPKIVLAPVSGALLRRFGAPRVACLALAAEAVLTGALPWCDDFVVL
                     QVVIAGIGALDVFMMPGMMALRGTVTPEGFELAGNSLCSM"
     gene            complement(622..2607)
                     /locus_tag="VHX39_00755"
     CDS             complement(622..2607)
                     /locus_tag="VHX39_00755"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3989676.1"
                     /translation="MKLMHRLKLRTKLALVLGLAVLAVIVTVGAGASLMYQRMYDDRV
                     AELNAVLQTTMSLAKGLEAQVVAKQITREQAIQQMRDDVHLIRYDGAWVTVYSWDGII
                     LMQGAQPALEGKPGVARDSDGHTVMELARIALANADTGVIRYSYPRAGETVPKPKISL
                     LGRFRPWDAVFNCSLYIDDLDADYRALLIRLSAIGGGILVVTLLIAWLVNHDIARSFG
                     ALRQAMAQLATGDLATEIPGTGRRDEVGAMAAAVLVFQQGLRKVEQLAGERDAERERA
                     DQDKTAALIRMADTIESETRGAVSQIGERTKTMQGAATDMSESAMRTGASAQSAAEAS
                     SLALATAQTVAGAAEQLAASIREISGQVGQSTSVVGRAVEAGAETRRTIDMLNRQVEE
                     IGAVADMIGEIAARTNLLALNATIEAARAGDAGKGFAVVATEVKALATQTARSTADIT
                     RHIGEVRAATGASVDAVGRIEHTIGEMNAIVTSIAAAVEEQGAATADIARTVSQTAAA
                     ASEMSARTSEVSREAAQTGQRVGVVMGDINALNTAIDELRVTVVRVVRTSTRDVDRRA
                     TERYTMEWPARLLLDGKPFDVQVVDLSEGGARIVGGPAQSVGARGTLALDGGGLPLPF
                     RVVGTDGGSVRLEFTFDAAAATAFHGVPERLSGRRAA"
     gene            complement(2809..>3057)
                     /locus_tag="VHX39_00760"
     CDS             complement(2809..>3057)
                     /locus_tag="VHX39_00760"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX3989677.1"
                     /translation="SGYDETETAIEDISRGGIALRCDWPVSVGSELTIRLPGATDQVI
                     GRVARTGRGVIAVTFRQDKGALEQIDRALDTIGRLKAA"
BASE COUNT          560 a         1073 c          865 g          559 t
ORIGIN      
        1 ccatcgagca aaggctgttg ccggcgagtt cgaacccctc gggtgtcacc gtgccgcgta
       61 acgccatcat gcccggcatc atgaagacgt ccaacgcacc aatgccggcg atcaccacct
      121 gcagcaccac gaagtcatcg caccacggca acgcgccggt cagcaccgcc tcggccgcca
      181 gcgcgaggca tgcgaccctc ggtgcaccaa accgtcgcaa cagcgcacca gacaccgggg
      241 ccagcacaat tttcggcagg atgcgccaac tcagcgacaa caccagggca ccgccggcgc
      301 catagcgctc ggcaaccagg atcggcaatg ccgccagcac actccaggag cccagattgg
      361 cgcataacag tgcaacccag agcgcccgga atcgcggcac cgcgagtaag gttttccagt
      421 cacccatggc gcattgccaa agccggcgcc agacgattgc atgaagggag cgccggtccc
      481 acgtggttcc accccagaat tgggccttac aactgccccg gtctgcgcag gtttatcgcg
      541 tgccagcccg ttccgcgagg ggtacgttcc gcaagagagt cccgcgggct ggtcaacgcc
      601 cgtaacgcct gccgtcggcg atcaggctgc gcgacgccct gatagccgct caggcacgcc
      661 gtggaatgcc gttgcagccg ctgcatcgaa agtgaattcg aggcgcaccg atccgccatc
      721 cgtgccgacg acccggaacg gcagcggcaa cccgccaccg tcaagcgcca aagtgccgcg
      781 tgcgccaacc gactgcgccg gcccgccaac gatccgagcg ccgccttccg acaaatcgac
      841 cacctgcaca tcgaaaggtt tgccatcgag cagcaatcgc gccggccact ccatcgtgta
      901 ccgttctgtc gcccggcgat ccacgtcccg tgtcgaagtc cgcaccacgc gcaccaccgt
      961 cactcgcaac tcgtcgatcg ccgtgttgag cgcattgata tcgcccatga ccacgcccac
     1021 ccgctgaccg gtctgcgctg cctccctcga tacctcgctg gtccgcgcgc tcatttcgct
     1081 tgccgccgcc gcggtctgcg acacggtgcg ggcgatgtcc gcggtggcag caccttgttc
     1141 ctccaccgct gcggcaatcg aggttacgat tgcattcatt tcgccgatcg tgtgctcgat
     1201 gcgcccgaca gcgtcgacgg acgcgccggt cgccgcgcgc acctcaccga tatgtcgcgt
     1261 aatgtccgcg gtcgaccgag ccgtctgggt cgccaatgcc ttgacctcgg ttgccaccac
     1321 agcgaagcct tttccggcgt ctccggcacg cgccgcctcg atcgtcgcgt tcaacgcaag
     1381 cagattggtc cgtgcggcaa tttcaccgat catgtcggca acggcgccaa tttcctcaac
     1441 ctgccggttg agcatgtcga tcgttcggcg cgtctccgcg cctgcttcga cggctcgccc
     1501 aaccacggat gtcgattggc cgacctggcc gctgatttca cggatcgatg ctgcgagttg
     1561 ctcggcggct cctgccacag tctgggctgt ggcaagggcc agcgacgatg cctccgccgc
     1621 gctttgtgcc gaggcaccgg tgcgcatcgc cgattcactc atgtcggttg cagccccctg
     1681 catggtttta gtacgttcgc cgatctggct gaccgcaccg cgtgtctcgc tctcgatcgt
     1741 gtcggccatc cggatcaggg ccgcggtctt atcctgatcg gcccgctccc gttcggcatc
     1801 ccgttcaccg gcgagttgtt ccaccttgcg caggccttgt tgaaagacca gcactgccgc
     1861 ggccatggca ccgacctcat cgcggcgtcc ggtcccgggg atttcggttg cgaggtcgcc
     1921 ggttgccaac tgcgccatcg cctgccgcag cgcaccgaac gatcgggcga tgtcgtgatt
     1981 gaccagccac gcgatcaaca acgtcaccac cagaatgccg ccgccgatgg cactgagccg
     2041 gatcaacaaa gcgcgatagt cggcatcgag atcgtcgata taaaggctgc aattgaatac
     2101 tgcgtcccac ggccggaagc ggcccagcaa cgaaattttc ggtttgggca ctgtctcacc
     2161 agcgcgcgga taggaatatc tgatcacgcc cgtgtcggcg ttcgccagcg cgatacgcgc
     2221 cagttccatg accgtatgac catcggaatc ccgagccaca cctggcttgc cctccaacgc
     2281 cggctgggcg ccttgcatca gaataatccc gtcccaactg taaaccgtga cccaggcgcc
     2341 atcgtaacga atcaggtgca cgtcgtcgcg catctgctgg atcgcctgct cgcgtgtgat
     2401 ttgcttcgca acaacctgag cttccaaccc tttggcgagg ctcatggtcg tttgcaatac
     2461 ggcatttagt tcggcgaccc gatcgtcata catgcgttgg tacatcagcg atgcaccggc
     2521 acccacggtc acgatcaccg cgaggaccgc aaggcccagt acgagcgcga gtttggtgcg
     2581 aagtttaagt cggtgcatca gtttcattcc gggtcctccc ctgtctggcg tcccgcgttg
     2641 ccgaatacgc cacgaaccac cggtggaggt tgctttcgcg tacagggtcg cccgcgcatg
     2701 aacatcgctg acagggttta atctgcggtt aattctccga tgtgatttgc gatccgtgcg
     2761 gcccgtaaac ctgtggcgaa cgcgagttga aaacaccagg taccaccgtc atgcagcctt
     2821 gagccgtcct attgtatcaa gcgcgcggtc aatctgttcc agtgcgccct tgtcctgccg
     2881 gaacgtgacc gcaatgacgc cgcgaccggt gcgcgcgacc cgtccaatga cctggtccgt
     2941 cgctccgggc agtctgatcg tcaactccga accaaccgaa accggccagt cgcaacgcaa
     3001 agcgataccg ccgcgcgaga tgtcctcaat tgccgtctcg gtctcatcgt aaccgct
//
LOCUS       DATAVD010000045         2059 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3541380, whole genome shotgun sequence.
ACCESSION   DATAVD010000045 DATAVD010000000
VERSION     DATAVD010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3541380"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1570)
                     /gene="dnaG"
                     /locus_tag="VHX39_00765"
     CDS             complement(<1..1570)
                     /gene="dnaG"
                     /locus_tag="VHX39_00765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEX3989678.1"
                     /translation="MALPPQFLDELRARTPLAAVIGRRVRLARSGRQWKGCCPFHGEK
                     TPSFYVYDDHYHCFGCGKHGDAITFVMDSQGASFPEAVEQLAAEAGMQVPKPSPEAAE
                     AEKQRLDLAAVLDAAAAGYQRRLLLPEGKAARDYLGNRGLSEETIRRYGLGWSGEGRG
                     AIAADLAREGVTTDQLVDSGLMRRDDETGRVFDLFFNRVMFPIRDRRGRTISFGGRIM
                     GDGQPKYVNGPETALFSKRRTLYGLDLAREAVRRAERNTLVVVEGYMDVIALGQAGFD
                     AAVAPLGTALTEEQLTELWRLAPAPVLCFDGDAAGARAAARAAELALPMLAPERSLRL
                     IALPSGEDPDSLVRSRGAPAFQAMLDGARPLSQCLYDLLHEGMGDTTPEQRAAFRTRL
                     EEAAKRIPDKALAGEYRSVLLDRFFAGRRRDRGGPGSTHRSSAQRSAFRQAAPSWTGP
                     RPPANATSIAAERVRILTAILLCHPGLFHDVEHAYAGLDLDPTLAQVRDAITEWAIHA
                     EVLDSQALIDHLRQL"
     gene            complement(1570..2028)
                     /locus_tag="VHX39_00770"
     CDS             complement(1570..2028)
                     /locus_tag="VHX39_00770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019090410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEX3989679.1"
                     /translation="MSLREQFTEQLKVSMKAGNAARTSTLRMIMAKLKDTDIAARPKG
                     IDRVPDDEVLAMLRSMVKSRRESVTLYEQGDRPELAAKETAEIAVIETFLPQQMDDTA
                     IEAAVAAVISEAGAASIKDMGKVMAALRAKHAAALDMAKAGAIVKARLSA"
BASE COUNT          355 a          668 c          663 g          373 t
ORIGIN      
        1 cgagttgtct caggtggtct atcagagcct gagagtcaag gacttcggca tgtattgccc
       61 actctgtgat cgcatcacgg acttgtgcga gcgtcggatc aaggtcgagg cctgcgtatg
      121 cgtgctccac gtcgtgaaaa agcccagggt ggcacaacag gatcgcggtg aggatgcgga
      181 cccgttcagc ggcaatggaa gttgcattcg ccggcgggcg agggccggtc cacgacggag
      241 cagcctgacg gaacgccgaa cgttgtgcgg aggaccggtg ggtcgatccg ggtccaccgc
      301 gatcccgccg acgaccggca aagaaccggt caagcaaaac actgcgatat tcgccagcaa
      361 gggctttgtc gggaatgcgt ttcgccgcct cctcgagtct ggtccggaac gccgcacgtt
      421 gctcgggcgt tgtgtcgccc attccctcat gcagcaggtc atacagacac tgcgacagcg
      481 ggcgggcacc atccagcatt gcctgaaacg caggtgcgcc gcgcgagcgg accaggctgt
      541 cggggtcctc gccggacggc aaggcaatca atcgcaacga acgctcgggg gccagcatcg
      601 gcaaagccag ttcggctgcc cgcgccgccg ctcgtgcacc cgccgcgtca ccgtcgaaac
      661 acagcaccgg tgcgggtgcg aggcgccaga gttcggtcag ttgttcctcg gtcaacgcgg
      721 tgccaagcgg cgcaacggcc gcgtcaaagc cggcctggcc cagggcgatc acgtccatgt
      781 agccttcgac gacgaccagt gtgttccgtt cggcacgccg caccgcctct cgcgccagat
      841 ccaggccgta gagtgtgcgc cgcttggaaa acagcgcggt ctccggcccg tttacgtatt
      901 tcggctggcc gtctcccatg atccggccac caaagctgat ggttcgtccg cggcggtccc
      961 ggatcgggaa catgacgcgg ttgaaaaaca aatcgaacac acgaccggtt tcatcatcgc
     1021 gtcgcatcag cccggagtcg acgagttgat cagttgtcac accctcccgc gccagatcgg
     1081 cagcgatcgc gccgcggccc tcaccggacc agccgagccc gtaacgacgg atcgtttcct
     1141 cggacaggcc gcgattgccg aggtagtcgc gcgctgcctt gccctccggc agcaacagcc
     1201 ggcgctggta accggcagca gcggcgtcca atacggcagc gaggtccagt cgttgctttt
     1261 ctgcttcggc cgcttcgggc gacggcttcg gcacctgcat gccagcctcg gcggcgagct
     1321 gctcgacggc ttccgggaaa ctcgcccctt gggagtccat gacgaaggtg atggcatcgc
     1381 catgcttgcc gcaaccgaag caatggtaat ggtcgtcata gacgtagaag cttggggtct
     1441 tctcgccatg gaatgggcaa caacccttcc actgccgtcc ggagcgcgcc agccgcactc
     1501 gtcggccaat caccgccgcc agcggcgtgc gtgcgcgaag ctcgtcgagg aattggggcg
     1561 ggagggccat caggccgaga gcctggcctt cacgattgca cccgccttgg ccatgtcgag
     1621 cgcggccgcg tgtttcgccc tgagagcggc catcacctta cccatgtcct tgatgctggc
     1681 agcgccggcc tccgagatga ctgccgccac ggctgcctcg attgccgtgt cgtccatctg
     1741 ctgcggcagg aaagtttcga tgacggcaat ttccgcagtt tccttggcgg cgagttcggg
     1801 gcggtcgcct tgctcataga gcgtcactga ctcgcggcgg gatttgacca tgctgcgcag
     1861 catcgccagc acctcatcgt cagggacgcg gtcgatgcct tttgggcggg cggcgatgtc
     1921 ggtgtccttc agcttcgcca tgatcatgcg cagcgtcgag gtccgcgccg cgttgcccgc
     1981 tttcatcgag accttgagct gttccgtgaa ctgttcgcgc aggctcatgg caggctccga
     2041 gtctttggat ggcacggag
//
LOCUS       DATAVD010000046         3012 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1120970, whole genome shotgun sequence.
ACCESSION   DATAVD010000046 DATAVD010000000
VERSION     DATAVD010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3012
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1120970"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..275
                     /locus_tag="VHX39_00775"
     CDS             <1..275
                     /locus_tag="VHX39_00775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989680.1"
                     /translation="GWVKIMEEEIIPFQISKGMVICGSYRGETDDSIYFWIRRFESEE
                     QREQQYKDVYESEYWKTKIAPKAPDYVVRGANVINRVVPTPRSAVQ"
     gene            complement(415..1545)
                     /gene="lpxB"
                     /locus_tag="VHX39_00780"
     CDS             complement(415..1545)
                     /gene="lpxB"
                     /locus_tag="VHX39_00780"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019088306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEX3989681.1"
                     /translation="MPLTYLIAGEESGDVLGARLMRALKAKRPDMTFTGIGGTAMAEQ
                     GLVSLFPIRTLALMGLAEILPKIFELRARLRQTVADIRARAPDVLVTIDSPGFTLRVL
                     RALGSTRIRRAHYVAPQVWAWRESRVKHFPGLWDELLCLLPFEPAFFARHGLAAQFVG
                     HPVMESGADKGNGPRFRDQHGIGTEAKVVTIMPGSRHTEVSRLLPILEATMQRLPDRV
                     VPIVPLAGPVAERVRQQTSSWPTPPILVSDAAAKYDAFAASDVALTKSGTSALELALA
                     NVPMLVTYRVHPITNQFTKRLIKVKYVSLPNLLLDRALIPELLQDACNPDSLAAGLHH
                     LLTDPAAVADQQRGFSEAMNMLRPSSVSPSECAADVVLSMLQ"
     gene            complement(1560..>3012)
                     /locus_tag="VHX39_00785"
     CDS             complement(1560..>3012)
                     /locus_tag="VHX39_00785"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX3989682.1"
                     /translation="STIPDNGEWQDRGRQGMAGTGVVRGWRAGQALAWFVIDPVNCIE
                     HFCRRYGPVVRVQWRQTKPILVLIGPEFNREVLMASDRLRPTGIWPVRAPEGSAQANL
                     RRNLLTVHGAEHKPVSDSLLPHLERGQVEAYFDQVREIALAEIGGWPVGKPVDIYALF
                     RNLAQRYAFEVLFGIADADKSREFGAHIADYHAANWSRIAAIVRLDLPGLPYRRVLRR
                     AETLQNFVLALMAQARGCPMHSDVRCTMAGLVDEAGKTMSAARTAALMSSIALASYET
                     TATTLAWALVLLSQHPNVMAALANEVAEAGPIEILSSRRLGELKLLDAVLKETLRILT
                     PVPMLGFKTLHDCEIAGFDLPEAATVMISPHLTHRMPELYDQPDRFLPERWFNIRPTT
                     YEYLPFSGGPRRCPGYLFAMANMRMALAVLLSRFNVGLVVGARYNRSYAAVNGPHGTV
                     PASLSLRHGAPIVAKVPRRLGSVFEMFAPAAAA"
BASE COUNT          656 a          945 c          869 g          542 t
ORIGIN      
        1 atggatgggt gaagatcatg gaagaggaga tcattccgtt ccagatctcc aaaggcatgg
       61 tcatctgcgg gtcgtatcgc ggcgagaccg acgactcgat ctacttctgg atccgccgct
      121 ttgagagcga ggaacagcgg gagcagcagt ataaagacgt ttacgagtca gagtactgga
      181 agaccaagat cgctccgaag gcaccggact acgtggtgcg tggcgccaac gtcatcaacc
      241 gtgtggtgcc aacgccgcgc tcggcggtcc agtaacgcct tgctacggcc cactcaaccc
      301 gggtgggccg tagcctgatt gcccggctcg tcgccgcgcc aattattccg gatgaattac
      361 caagcgccga tcgacgctta caacaacggc ctgctctggc ctgcggaaag agcgtcattg
      421 caacattgac aggacgacat cggccgcgca ctccgacggg ctgacggaag acggccgcaa
      481 catgttcatt gcttcagaga aacctctctg ctggtcggcg acggcagcgg gatcggtcag
      541 aagatgatgc aatccggcag ccaaactgtc agggttacac gcatcctgca atagttccgg
      601 gatcagcgca cgatccagca gaagatttgg caacgataca tatttcacct tgatcaatcg
      661 tttggtgaac tgattggtga tggggtgcac ccgatatgtg accagcattg gcacgttggc
      721 cagcgccagc tccaaagccg atgtccccga cttggtcaat gcaacatccg acgcggcaaa
      781 cgcatcatat ttggcggcgg catcagacac caggatcggt ggcgtcggcc agctggaggt
      841 ttgctggcgc acccgctcgg caaccggtcc ggcgagcggc acgatcggaa ccacccgatc
      901 aggcagacgc tgcatcgtcg cctccaggat cggcaacagg cgggacactt cggtgtggcg
      961 gctgccgggc atgatcgtta cgaccttcgc ctcagtgccg atgccatgtt gatcccggaa
     1021 acgcggccca ttgcccttgt cggcgccact ctccatcacc ggatggccga caaactgcgc
     1081 ggcgagacca tgacgggcaa agaatgccgg ctcgaacggc aacaggcaca gcagttcatc
     1141 ccacaggccg ggaaaatgtt tgacccggct ctctcgccag gcccagacct gaggcgcgac
     1201 ataatgcgcg cgccgaattc gggttgagcc cagagcacgt agcactcgca gcgtgaagcc
     1261 gggcgagtca atggtaacca gtacatccgg cgcacgagcc ctgatatcgg cgacggtctg
     1321 cctcaggcgt gcacgcagtt cgaaaatctt aggcaggatc tcggccaatc ccatcagagc
     1381 cagggtacgg atcggaaaca aactgaccag gccttgctcc gccatggcag tcccgccgat
     1441 acccgtgaac gtcatatcgg gtcgctttgc cttgagcgca cgcatgagcc ttgcacccag
     1501 aacgtcgcca ctctcctcac cggcgatcag gtatgtgagc ggcatggccg gagtttgctc
     1561 taagccgctg ccgctggtgc aaacatctcg aatacgctgc ccaatcgccg cggcactttc
     1621 gccacaatgg gggcgccatg cctcagcgac agcgacgccg gaaccgtccc atgcgggcca
     1681 ttcactgccg cataactgcg attgtagcgt gcgccaacga cgagtccgac attaaatcgg
     1741 ctcaacaaca ccgccagcgc catgcgcata ttggccattg cgaacaaata tcctgggcat
     1801 cgccgtggac cgccactgaa cggtagatat tcataggtgg tcgggcgaat attgaaccag
     1861 cgttccggca ggaaacgatc gggttgatca taaagctcgg gcatccgatg cgtcaaatgt
     1921 gggctgatca tcactgtggc cgcttccggc aaatcgaagc cggcaatctc acagtcgtgc
     1981 aacgtcttaa agccgagcat cggcacgggc gtcaggatgc ggagcgtttc cttcaatacc
     2041 gcgtccagca gctttagttc gccaaggcgc ctgctgctca ggatttcaat cggcccagcc
     2101 tccgccacct cattcgccag ggcggccatc acattcggat gttgcgataa taaaaccaaa
     2161 gcccaggcga gggtcgttgc agtggtttcg tacgatgcca gagcgatact gctcatgagc
     2221 gcggcagtgc gcgcagccga cattgttttg ccggcctcat cgaccaggcc cgccatggtg
     2281 caccggacgt ccgaatgcat tgggcaacca cgcgcctgcg ccattaaagc aagaacgaag
     2341 ttctgcaatg tctcagcccg ccgcaacacc cggcgatacg gcaatcccgg caggtcgagc
     2401 cgcacgatgg cggcaatccg cgaccagttc gcggcatgat aatcggcaat atgggcaccg
     2461 aattcgcgcg acttgtcggc atcggcaatc ccgaacaata cctcgaacgc gtaacgttgc
     2521 gcgaggttgc ggaacagggc gtatatatcc accggcttgc cgaccggcca gccgccaatt
     2581 tccgccagcg caatctcgcg cacctgatca aaataggctt cgacctggcc tcgctccaga
     2641 tgcggcaaaa gcgagtcgct gactggcttg tgttccgctc cgtgtacggt cagcagattg
     2701 cggcgaagat tggcctgcgc cgatccctcg ggcgcacgca ccggccagat accggtcgga
     2761 cgcaaccggt cggacgccat caacacctca cgattgaact ccggtccaat cagcacaaga
     2821 attggtttcg tttgccgcca ctgcacgcgc accacgggac cgtaacggcg gcagaagtgc
     2881 tcgatgcagt tgaccggatc gataacgaac caggccagag cctgacccgc acgccaacct
     2941 cggacgactc ccgttcccgc catgccctgc cgcccccggt cttgccattc tccgttgtcg
     3001 gggatggtcg at
//
LOCUS       DATAVD010000047         3178 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2051970, whole genome shotgun sequence.
ACCESSION   DATAVD010000047 DATAVD010000000
VERSION     DATAVD010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3178
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2051970"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1045)
                     /locus_tag="VHX39_00790"
     CDS             complement(<1..1045)
                     /locus_tag="VHX39_00790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3989683.1"
                     /translation="MDEQNLRDAIEDVRRGSLSRRAFTLRMLGLGLTAPLAAQMLASS
                     GVAVAAETLVYKPTKRGGGGALKVLWWQGATLLNPHFAVGTKDQDGSRVFYEPLAGWD
                     PEGNLVPVLAAEVPTIENGGLAKDGLSVIWKLKAGVKWHDGQAFTADDCIFNWQYAAN
                     PATAATTIGSYKDINVVKIDEHTIRVEFEKPTPFWSDAFVGVSGMIIPKHIFEPYAGA
                     KSRDAPANLAPVGTGPYLFVSFNPGDLVQGKINPNYHQANRPYFDSFEMKGGGDAVSA
                     ARAVMQTGEYDFAWNMQVEDEILKRLEAGGKGHAQITETGNMEHIELNNTDPWKEVDG
                     ERSSLKTKHPFLTD"
     gene            complement(1261..2901)
                     /locus_tag="VHX39_00795"
     CDS             complement(1261..2901)
                     /locus_tag="VHX39_00795"
                     /inference="COORDINATES: protein motif:HMM:NF015148.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OPT/YSL family transporter"
                     /protein_id="HEX3989684.1"
                     /translation="MSQAIADDVPAADAERVHPAFFSLGSLILITPLCVVGAIIGTQL
                     IVTLGITTNTSLIGALAGMGLARIPLLAFARYRSVHMQNLAQSAISASTFGAGNALLL
                     PIGIPFVMGRPDLVLPLFAGVFLAMLVDGYLLYRMFDSEVFPTGGAWPPGVAAAEAIK
                     AGDEGGRKLAILGAGVVIGAAGGWFKIPMSAFGVAFIGNIWALSMFGIGLLTRFYSTT
                     LFNSGVFASLIPKGDINAAYIPHGFMVGAGLVALVQVVILMLRNDDGTSAVGAVKTTA
                     DVRRSMGLGGTAFVLIAGLIALLGGLWSELSPGMLVAFVLYAALAALLHEVIVGLAAM
                     HAGWFPAFAVALITLVIGVLAGFPPVALTLLVGFSAATGPAFADMGYDLKAGYMLRGY
                     GADPSFEREGRKQQLFAALFAFGVAAVVVLVGYPGYFAHNLVAPADRVFAATIKAGAS
                     MDVARQLLIWAVPGAILQFLGGPKRQIGVLFATGLLLLVPWAGWAVMAGVVIRLIWSR
                     LGGVSQRSTMEVFAAGVIAGDALFSFYDMGRKYAALKQ"
     gene            complement(2936..>3178)
                     /locus_tag="VHX39_00800"
     CDS             complement(2936..>3178)
                     /locus_tag="VHX39_00800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989685.1"
                     /translation="VRGVVLDGAGTVVHDCGTGELVTLTTTERMVEVCLAGGSGFGDP
                     RERARSEIDDDVADGYVSQDAATRVYGVAASASAAE"
BASE COUNT          677 a          993 c          951 g          557 t
ORIGIN      
        1 gatcggtgag gaaggggtgc ttcgtcttga ggctcgaccg ttcgccgtcg acctctttcc
       61 acggatcggt gttgttgagt tcgatatgct ccatgttgcc ggtctcggtg atttgggcat
      121 ggcccttacc gccggcttca agccgtttca aaatttcgtc ttcgacctgc atgttccagg
      181 cgaagtcgta ttcgccggtc tgcatcacgg cacgcgcggc cgatacggcg tcgccgcctc
      241 ccttcatctc gaagctgtcg aagtacggcc ggtttgcctg atggtaattc ggattgattt
      301 tgccctgcac gagatcgccg gggttgaaac ttacgaacag ataagggccg gttccgacgg
      361 gtgcgaggtt ggccggtgcg tcacgcgatt tggcaccggc atacggttca aagatgtgtt
      421 tcggaatgat catgccgctg acaccgacga aagcgtccga ccagaatggt gtcggcttct
      481 cgaattcgac acgaatcgtg tgttcgtcga tcttgacgac gttgatatcc ttgtagctgc
      541 ctatggtcgt cgccgcagtg gcgggattgg cagcgtattg ccaattaaag atgcaatcat
      601 cagccgtaaa cgcctggccg tcgtgccatt tgacacccgc tttgagtttc cagatcaccg
      661 aaaggccgtc tttggcgagg ccgccgttct caatggtcgg gacttcggcg gcgagaaccg
      721 gaaccagatt gccctcgggg tcccaaccgg ccagcggctc gtagaacacg cgcgagccat
      781 cctggtcctt ggtgccgacc gcgaaatgcg ggttcagcag cgtcgctcct tgccaccaaa
      841 gcaccttcag cgcgccgccg ccgccgcgtt ttgtcggctt gtagaccagt gtctcagccg
      901 cgacagccac accggacgag gccagcattt gtgctgcgag aggggctgtc aggcccaggc
      961 ccagcatcct gagggtaaat gcgcgtcgcg agaggctgcc tcgtcggacg tcttcgatgg
     1021 cgtctcgcag attttgttcg tccattataa ttcaccttat cccagggccc cgacgcgaga
     1081 acgtcgctcg caaggagcat gccatttcgc ctgtggtgcg gatgctaggc acatattgta
     1141 accgaggaca acgacgaacc gtccggactg gttaccggcg cgccgccgaa gggtcagaca
     1201 attcgaagcg cgccgcacaa accgccaata gccccgtgga ccatccggcc ggggagctga
     1261 ctactgtttc agtgccgcgt atttgcggcc catatcatag aagctgaaca atgcgtcccc
     1321 ggcgatgact ccggccgcaa acacttccat ggtcgagcgt tggctgacac cacccagccg
     1381 gctccaaatc aggcggatga cgacaccggc catcaccgcc catcccgccc atggcacgag
     1441 caataagagg cctgttgcga acaacacacc gatctgccgt ttcggtccac cgaggaactg
     1501 caatatggcc ccgggcacag cccagatcag cagctgcctc gccacgtcca ttgaggcccc
     1561 ggccttgatt gtcgcggcaa agacccggtc tgccggagca acgaggttat gggcaaaata
     1621 gcccggatat ccgaccagca cgaccaccgc agcgaccccg aaggcgaaca gggcggcaaa
     1681 caattgctgc ttgcggccct ctcgttcgaa gctcggatcg gcgccgtagc cgcgcagcat
     1741 gtagccggcc ttgagatcgt aacccatgtc tgcaaacgcc ggtccggtgg ccgcggaaaa
     1801 gcctacgagc aatgtcaggg cgaccggcgg aaagcctgcc agcacaccga tcaccaacgt
     1861 gatcaacgca acggcgaagg cgggaaacca tccggcatgc atcgcggcaa gcccaacgat
     1921 gacctcgtgc aaaagcgcag cgagagcggc gtaaagcacg aacgcgacca gcatacccgg
     1981 agatagctcg ctccaaagcc cgccaagcag ggcgatcagg ccagcgatca acacgaaggc
     2041 ggtaccgccc agacccatcg aacggcggac atcggcggtg gttttcaccg cgccgactgc
     2101 agaggtgcca tcatcgttgc gcagcatcag gatcacgacc tgcaccaggg cgaccaatcc
     2161 tgcaccgacc atgaaaccgt gtgggatata ggcggcattg atgtcgcctt tcgggatgag
     2221 gctggcgaag acaccgctgt tgaacaacgt cgtcgagtag aaacgggtca gcaggccaat
     2281 gccaaacatc gacaaagccc agatattacc gataaacgcg acgccaaagg cggacatggg
     2341 gattttgaac catccgccag cggcgccaat cacgacaccg gcgcccagga tggcaagctt
     2401 gcggccaccc tcatcaccgg ccttgatggc ttccgccgct gccacaccgg gcggccaggc
     2461 gccgccggtg ggaaacacct cgctgtcgaa cattcggtaa agcaggtaac cgtccaccag
     2521 catcgccagg aagacgccgg cgaacaacgg caacaccagg tccggccggc ccatgacaaa
     2581 gggaatgccg atcggcagca gcagcgcatt gccggcgcca aaggtcgagg ccgaaattgc
     2641 cgactgcgcc aggttctgca tgtgcaccga tcggtatcgg gcgaacgcca gaaggggaat
     2701 gcgcgcaagt cccatccctg ccaaagcacc aatcagcgat gtgttggtgg ttataccaag
     2761 agtgacgatc agctgcgtgc cgatgatggc accgacgacg cacagcggcg tgatcaggat
     2821 cagactgccc aggctgaaga aagccggatg aacgcgttcg gcatcggcgg ccggtacgtc
     2881 gtctgctatt gcctgtgaca ccttggcctc acttcggtac gatgtgacag gcaaatcatt
     2941 ccgccgcgga ggcggaagcg gcgacgccat agactcgtgt ggcagcgtct tgggaaacgt
     3001 agccgtcggc aacgtcgtcg tcgatttcag accgtgctcg ctcgcgtgga tcgccgaagc
     3061 ctgagccgcc tgcgaggcaa acctcgacca tgcgctcggt cgtggtcagt gtaacgagtt
     3121 cgccggtgcc acagtcgtgc acaacagtgc cggcgccgtc cagcacgacg ccacgcac
//
LOCUS       DATAVD010000048        11223 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3168760, whole genome shotgun sequence.
ACCESSION   DATAVD010000048 DATAVD010000000
VERSION     DATAVD010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 11223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11223
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3168760"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..595)
                     /locus_tag="VHX39_00805"
     CDS             complement(<1..595)
                     /locus_tag="VHX39_00805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3989686.1"
                     /translation="MMASIGTVLLAMLAGSLRVSTPFLFVSLGECLTEKSGRINLGNE
                     GVLVLGAMVAYATSYETGSPWLGLIAAALAGLLLGGLHGAVCSLAKVNDVAMGIAIML
                     AGTGIAFFFGKPFIQPSAPLLPGIPFGFWSSSPQVRYALLVCPLFLLGIVAAIALHWC
                     FNATRVGLRIRIVGDSQDAALALGLPIAQTRFLATACG"
     gene            complement(595..1698)
                     /locus_tag="VHX39_00810"
     CDS             complement(595..1698)
                     /locus_tag="VHX39_00810"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3989687.1"
                     /translation="MSTATLAAQAESTRATDSWYPLRRAAEVILAPLAALVGAAILFS
                     IFLLFLGQSPLDFLDLIWRGAFGSWFSIQNTVERASPLLLTALCVAIPGQLGLVIIGG
                     EAAVVLGGLAATVCALPLIHTSPVIVWAVMAIAGSAMGAFWIGISGWLRAKLNVNEVI
                     ASLVLSYIGLALFNHFVEGILRDPASLNKPSTYGIGDANMLATVPWLNVHPGLPVGIL
                     ACVLCWVLIYRTGIGFASRVTGGNIRAALLQGLPVTRLILLACAIGGGCAGLAGAIQV
                     AAEYGRANASLNAGYGYTGILIAFLARFNPLAIMPMAILLGGLGAADGLLQRRLGLPD
                     ATIQVLQGLIFVLILASDTLYGRFRWFQPRGGA"
     gene            complement(1711..2823)
                     /locus_tag="VHX39_00815"
     CDS             complement(1711..2823)
                     /locus_tag="VHX39_00815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX3989688.1"
                     /translation="MPISTALSRRHVLGGAAGLAAVGLSSRDADAAKELVVGFIYVGA
                     KDDYGYNQAHAEAAAMLKKMPGVKIVEEEKVPETDDVSKTMESMIQLDGATLLFPTSF
                     GYFDPYMLKMAAKYPKIQFRHCGGLWTKKDPMNTGSYFGYIGMCQYLNGIAAAHATKT
                     KKLGFIAAKPIPQVLINVNSFALGARSVDPSITTSVIFTGEWSMPVKEAEAANSLADQ
                     GSDVLTCHVDGPKVIMETAERRGIYCCGYHVDQSKLAPKGYLTGAEWHWITVYKEFLG
                     DAQSGKTLPNFVRGGLKEGFVKMSPYGPGLSAAGRKNVDAVKAEIMKGGFSVFKGPMK
                     DNKGNVVIPAGTAYPETAIQLESQNYLVEGVNGAIA"
     gene            3330..4181
                     /locus_tag="VHX39_00820"
     CDS             3330..4181
                     /locus_tag="VHX39_00820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989689.1"
                     /translation="MAALLVTASQARADGGFSDTSIGIRDGLTVSNPGGNPGDEKGSR
                     NVNKLIVNVGHFDVWDYGSNFFNVDVLFSNPNEAAYNSSGGSTEFYGVYRGQLSPDKI
                     FGINTKFGPISAINFEFGGDAESENTQFAPNKKLLIVGPNFHVALPAGFLNIGVHLSK
                     EWNHNGFCADACSQPGGPVNFHATPEFEFVWLYPLTFTGLPLDFRGFMNIVLPKGKDG
                     FGGNTYTEILARPQLQLDLGSMLFHKAHKPDLYFAVELWEHKFGASDKTAGSEEVAPE
                     IGIEYHF"
     gene            complement(4239..4727)
                     /gene="ruvX"
                     /locus_tag="VHX39_00825"
     CDS             complement(4239..4727)
                     /gene="ruvX"
                     /locus_tag="VHX39_00825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEX3989690.1"
                     /translation="MALFNLKDLLASLGRDQRVIGIDPGAKTIGLALSDVRRVLASPY
                     GSLKRGKLMANATEIAAIALREGAYGLVIGLPLSMDGTAGPAAQAARDWSHALSDATG
                     LPAALWDERLSSAAVNRFLINEADLTRAKRAEVVDRAAAAWMLQAALDAGSQLDPSGQ
                     IV"
     gene            4779..5066
                     /gene="gatC"
                     /locus_tag="VHX39_00830"
     CDS             4779..5066
                     /gene="gatC"
                     /locus_tag="VHX39_00830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEX3989691.1"
                     /translation="MSLDPATIRRIASLARIRVEDHEVEPLCHELNGILGWIEQLNEV
                     DVTNVAPLTGATNMAMAMRLDVVTDGNYPEKILSNAPERIGDFYAVPKVVE"
     gene            5063..6544
                     /gene="gatA"
                     /locus_tag="VHX39_00835"
     CDS             5063..6544
                     /gene="gatA"
                     /locus_tag="VHX39_00835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010511546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEX3989692.1"
                     /translation="MMLTDLTIAQARYGLRAKDFSAVDLTMAHLHAIEALNPRLNAYI
                     TVSHARAVDQARAADAALAAGDARPLTGIPLAIKDLFCTEGVRTTAGSNILGPFVPPY
                     ESTVTANLLRDGAVFLGKTNMDEFAMGSSNMTSAYGPVENPWKRKQDDTAVLVPGGSS
                     GGSAAAVAARLAMGATGTDTGGSIRQPASFCGLVGVKPTYGRCSRWGVVAFASSLDHP
                     GPFARTVQDSAILLGSMAGYDPKDSTSARLPVPDFEAACARGVKGLRIGVPREYHSDG
                     MPAEIEALWQQGIDWLRDAGAEIVEVSLPHTKYGLPAYYIVAPAEASSNLSRYDGVRF
                     GTRQNGEDLRDLYERTRAEGFGPEVRRRVLIGTYVLSAGYYDAFYLRAQKIRSLILKD
                     FTDAFTKVDALLTTTAPTAPFAQGENMDDPVKMYLNDLFTVPSNLAGVPAASIPAGLD
                     ANGLPVGLQVIGRPFDEETVFAVSATLEQAAGFAAMPSLRAGG"
     gene            6547..8010
                     /gene="gatB"
                     /locus_tag="VHX39_00840"
     CDS             6547..8010
                     /gene="gatB"
                     /locus_tag="VHX39_00840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEX3989693.1"
                     /translation="MAYTLEGSTGPWEVVVGLEVHAQVVSNAKLFSGAATAFGAEPNS
                     QVSFVDAAFPGMLPVINAECVAQAVRTGLGLNARINTVSRFDRKNYFYADLPAGYQIS
                     QFEHPIVGTGEIEVELADGSSKTIGITRLHLEQDAGKSIHDQHPTKSLIDLNRAGVAL
                     MEIVSEPDIRSPEEAGAYVRKLRSILRYLGTCDGNMEEGSMRADVNVSVRKHGEPYRT
                     RCEIKNVNSIRFVMQAVETEAARQVEVWEAGGTVTQETRLFDSNRGMTRSMRSKEDAH
                     DYRYFPDPDLLPLVLEEDWIATLKAALPELPDAKRARFIQSYGLTPYDAAVLVAEKAT
                     ADFYEIVAKGRDPKIAANWITGDFFAAINRLGRSIEDPPVTAVQLGGLLDLMADSTIN
                     GRIAKDVFEAMVETGKDAATIVDEKGLRQVTDTGAIDQAVDRILAANPDKVAEYRSGK
                     DKLFGFFVGQTMKAMAGKGNPALINETLKRHLAPRKE"
     gene            complement(8211..9455)
                     /gene="oxlT"
                     /locus_tag="VHX39_00845"
     CDS             complement(8211..9455)
                     /gene="oxlT"
                     /locus_tag="VHX39_00845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006558404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxalate/formate MFS antiporter"
                     /protein_id="HEX3989694.1"
                     /translation="MTETAARLPAVATQGLTRWGQLGLGLICMMAISSPQYVWTLFTK
                     PLGTALGVAPASLQVTFSLLIVLQTFFSPFQGWLVDKFGPRLLIGVGGLLSGLSWVLA
                     SYASSLTMLYLTYGVVGGLGTGIVYVGVVGQMVGWFPDRRGFAAGVVAAGYGIGAILT
                     TFPIANSLAAVGYQMTLLQYGAIFALVGLVAALGLKPAPTSAIAAQNARGVSTGSMLG
                     SPIFWLMFVMMALMATSGLMVISQMAAFAGEFGITKATVWGLAALPLALSVDRFTNGL
                     TRPLFGWVSDRIGRENTMGLAFGLEGVAMALWLATRSDPLLFVLLSGVVFFGWGEIFS
                     LFPATLTDTFGTRNATQNYGCLYIAQGIGAIFGGPMASLLHGATGSWTPVFGVAIAAD
                     LVTAALAIAALKPLRARYARTG"
     gene            complement(9585..9920)
                     /gene="erpA"
                     /locus_tag="VHX39_00850"
     CDS             complement(9585..9920)
                     /gene="erpA"
                     /locus_tag="VHX39_00850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HEX3989695.1"
                     /translation="MEQFAVTDRAATRIAEIVAEANQATETALRVAVLAGGCSGFQYR
                     FELDPQTQPDDLVIERGPARVVVDSVSLDLLSGSELDYTDELMGSHFAVRNPNAKSAC
                     GCGTSFSID"
     gene            10000..11160
                     /locus_tag="VHX39_00855"
     CDS             10000..11160
                     /locus_tag="VHX39_00855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019091133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016793 - triphosphoric monoester
                     hydrolase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase"
                     /protein_id="HEX3989696.1"
                     /translation="MYVRPPPARYAVSAATARGRLHHEPEAETRSPWQRDRDRIIHSS
                     AFRKLQYKTQVFVNHEGDFYRTRLTHSIEVAQVARSIARALGLDEDLTEALALAHDLG
                     HPPFGHAGEEALNIAMKPFGGFDHNAQSLRMVTLLESRYGGWDGLNLTWETLEGLVKH
                     NGPLRHPAPYIVEYNDRHKLDLHTQPSAEAQVAAIADDVAYHSHDLDDGLRARLFTVD
                     DLKHLPVVGESLSAARMSSLDVPPPRLRHETLRRVINAMVTDLTTESSQRLAKLDPDS
                     PDAIRRHKQRVISFSARMADANQAIKDFLFARMYRHWRVNRMSAKARRLTEDLYRLLH
                     ADPTLLPDDWRARAGEAGVQRSATIVGDYVAGMTDRYAMDEHRRLTDISVNG"
BASE COUNT         2273 a         3798 c         3238 g         1914 t
ORIGIN      
        1 taccgcaggc cgtggccaga aaacgcgtct gggcgatcgg caatcccagc gccagcgccg
       61 catcctggct atcgcctacg atgcggatcc gcagcccgac gcgagtggcg ttgaagcacc
      121 aatgcaacgc gatggctgcc acgatgccga gaagaaacag cgggcagacc agcaacgcat
      181 atcggacctg cggactgctc gaccagaagc cgaacggaat accaggcagc agcggggcgg
      241 atggctggat gaacggtttg ccgaagaaga atgcgattcc ggtgccggca agcatgatgg
      301 cgatgcccat cgccacgtcg ttgacctttg ccaatgaaca gacagcgccg tgcagaccac
      361 ccagcaacag gcctgccagc gcggctgcga tcagacccag ccaggggctg cccgtttcat
      421 aggacgtcgc ataggcaacc atggcaccga gaaccagcac gccctcattc ccgaggttga
      481 tgcggccgga cttctcggtc aggcactcac caaggctgac gaacaggaat ggcgtgctga
      541 cccgaagact gcccgcgagc atggccagca gcacggtgcc gatagatgcc atcatcacgc
      601 gcccccccgc ggttggaacc agcggaagcg cccatacaat gtatcacttg ccaggatgag
      661 aacgaagatc agaccttgca acacctggat cgtcgcatcg ggcaggccca gacgccgttg
      721 cagaaggccg tcggcggcac caagaccgcc gagaagaatc gccataggca tgatcgccag
      781 tggattgaag cgcgccagga aggcgatcag aattcctgta tagccgtaac cggcattcag
      841 cgaggcattg gccctgccgt attccgccgc gacctggatg gcccctgcaa gtccggcgca
      901 gccgccgccg atcgcgcacg ccagcaggat caagcgtgta accggcagtc cctgcaacag
      961 cgcggctcgg atgttgccgc cggtaacgcg ggacgcgaac ccgatgccgg tccgatagat
     1021 cagcacccag cacagcacgc aagcgaggat gccgaccggc aggccgggat gtacattcag
     1081 ccacggcacc gtcgcaagca tgttggcgtc gccgatgccg taggtggacg gtttgttcag
     1141 acttgccggg tcacgcagga tgccttcgac gaaatgattg aacagcgcga gtccgatgta
     1201 ggacagcacc aggctggcga tcacctcatt gacgttcagc tttgcacgca gccagccgct
     1261 gatgccgatc cagaatgcgc ccatcgccga tccggcgatc gccatcacgg cccacacgat
     1321 gaccggactg gtgtggatca acggcagggc gcagacggtg gcggccaggc cgcccagcac
     1381 cacagccgcc tcgccgccga tgataacgag cccaagctga ccgggtatgg cgacgcatag
     1441 cgcggtcagc agcaggggcg aggcacgttc caccgtgttc tggatcgaaa accagcttcc
     1501 gaaggcgccg cgccagatta gatctagaaa atccagcggc gactgaccca ggaacagcag
     1561 aaagatcgag aacaggatcg cggcgccgac cagtgcggcg agcggtgcca ggatgacctc
     1621 agccgctcgg cgcaacggat accagctatc cgttgcccgg gtactttcgg cttgtgccgc
     1681 cagcgtggca gtgctcatgc cccgcgatcc tcaggcgatc gcgccgttca ccccttcgac
     1741 cagataattc tgcgactcca gttgaatggc ggtctcggga taggccgttc cggccggaat
     1801 gacgacgttg cccttgttgt ccttcatcgg acccttgaag acactgaaac cgcctttcat
     1861 gatttccgct tttaccgcat cgacgttctt acggccggcg gcggacaggc cgggcccgta
     1921 gggggacatc ttgacgaagc cttccttcag ccctccgcgc acgaaattgg gcagtgtctt
     1981 gccgctctgc gcgtcaccga ggaattcctt gtacactgtg atccaatgcc attcggcacc
     2041 ggtcagatag cccttcggcg ccagcttcga ctgatcgacg tggtagccac agcagtagat
     2101 accgcgcctt tcggccgttt ccatgatgac tttcgggccg tcgacatggc aggtcagcac
     2161 gtcgctgccc tgatccgcca ggctgttggc ggcttccgcc tctttcaccg gcatcgacca
     2221 ctcacccgta aagatgaccg atgtggtgat ggacggatcc accgaccgtg cgcccagggc
     2281 aaagctgttg acgttgataa gaacctgcgg gatcggcttg gcggcgatga aacccaactt
     2341 cttggtcttg gtcgcgtggg cagccgcaat gccgttgagg tactggcaca tcccgatgta
     2401 accgaaatag gaaccggtgt tcatcgggtc tttcttggtc cacagtccgc cgcaatggcg
     2461 aaactggatc tttggatatt tggccgccat cttcagcatg tacgggtcga aatagccgaa
     2521 gctggtgggg aacagcagcg tggcgccgtc caactgaatc atgctctcca tggtcttgga
     2581 gacgtcatcg gtttcgggga ctttttcttc ctcgacgatc ttcacgccag gcattttctt
     2641 gagcatcgcc gcggcttccg catgagcctg gttgtatccg tagtcgtctt tcgcaccgac
     2701 atagataaag ccgacgacaa gttccttcgc ggcgtccgcg tcgcgcgatg aaagaccgac
     2761 ggcggcgagg ccggcggccc ctcccagcac atgacggcgt gacaaggctg tcgagatagg
     2821 cattcatttc cccttcaaag gccaaccatg gccgcggcgc ggcttgccag ggtcgagttg
     2881 gcttcgacct ccggcctcgc ctgtcgttac gcaaaaggca tgccatacct cccaaaccat
     2941 gctcccggca aaaaacggcc cgcaatcgtc tgacgactgc tcacgaaaac ggcatcagga
     3001 tggaaaatgg gcggatttag gccgcgaatg tggccaatcg aagcaagaat ttgccgtctt
     3061 tcgataagac gccgaggaca gcgccaccga agcgggcaag ccatggataa ctatttcgta
     3121 agctttatca tatgagacac attccgataa catatcattc tgacccgccc gtcgtcgtaa
     3181 cccgcatttc gcgccgctgt tggcacatcg attgctcatt gtgaacgttg tgcgaagcaa
     3241 ctgtgcccgc gccgtcatcc tcccgcggca gacggacctt tggggctgaa caaaaaggac
     3301 aaacgatgaa gctaaggcat atattattca tggcggcgtt gctcgtgacc gccagccagg
     3361 cccgcgccga cggaggcttc agcgacacct cgatcggcat tcgcgacggc ttgaccgtgt
     3421 cgaatccggg cggcaatcca ggcgacgaaa aaggctcgcg gaacgtcaac aagctgatcg
     3481 tcaacgtcgg gcacttcgat gtttgggatt acggctcgaa cttcttcaac gtcgacgtgc
     3541 tgttctccaa ccccaatgag gcagcgtata attcctccgg cggctcaacc gagttctacg
     3601 gcgtgtatcg cggccagttg agcccggaca aaatcttcgg catcaacacc aagttcgggc
     3661 cgatctcggc aattaatttt gagttcggcg gcgacgccga atcggaaaat acccagtttg
     3721 cgccgaacaa gaagctgctc atcgtcggcc cgaatttcca cgtcgccctg cctgccggtt
     3781 tcctcaatat cggtgtccat ctgtcgaagg aatggaacca caacggcttc tgcgccgacg
     3841 cctgctcgca gcccggcgga ccggtcaatt tccacgccac acccgaattc gaattcgtgt
     3901 ggctgtatcc gctgacgttc accgggctgc cgttggactt ccggggcttc atgaacatcg
     3961 tcctacccaa aggcaaggac ggcttcggcg gcaataccta caccgaaatc ctcgcacgcc
     4021 ctcagctcca gttggatctt ggatcgatgc tgtttcataa ggcccacaag cccgatctgt
     4081 acttcgccgt ggaactttgg gaacacaaat tcggcgccag cgataaaacc gccggctctg
     4141 aggaagtagc tcccgaaatt ggtatcgaat accacttctg acctaacatt cacggcgatc
     4201 ccaggatcgc cgtgaatgaa tctcgccctg atatgtgtct atacgatctg gccggacgga
     4261 tctaattgcg aaccagcatc caacgccgcc tgcagcatcc acgccgccgc cgcacggtcc
     4321 accacctccg cccgcttcgc ccgcgtcagg tccgcctcat tgatcagaaa ccggttgacc
     4381 gcggcactgg acagccgttc atcccataac gccgccggca acccggtggc atccgacaac
     4441 gcgtgcgacc aatccctggc cgcctgtgct gcgggtccgg cggtgccgtc catcgacagc
     4501 ggcagaccga tcaccagtcc atacgcgcct tcgcgcaagg caatcgccgc gatctcggtg
     4561 gcgttcgcca tcagcttccc ccgcttgagg ctgccatagg gagacgccag cacccgccgc
     4621 acatccgaca gcgccagccc gatcgtcttc gcgccggggt cgatgccgat cacccgctgg
     4681 tcgcgcccca gcgacgccag caaatccttc aggttgaaca gtgccatgcg cgccgttatg
     4741 atcctgcccc ctcctccatc caaggttttt catcccccat gtcgctcgat cccgcgacca
     4801 tccgccgcat tgcctcgctc gcccgcatcc gcgtggaaga ccacgaggtc gagccgctgt
     4861 gccacgaact caatggcatt ctcggctgga ttgagcagtt gaatgaggtc gatgtgacca
     4921 acgtcgcccc gctgaccggc gccaccaaca tggcgatggc catgcgcctc gacgtggtca
     4981 ccgacggcaa ttacccagaa aagatcttgt ccaacgcccc cgaacggatc ggcgatttct
     5041 acgccgtgcc gaaagtggtc gagtgatgct gaccgacctg accatcgccc aggcccgcta
     5101 cggtctgcgc gcgaaggatt tctccgccgt cgacctgacg atggcccacc tgcacgcgat
     5161 cgaggcgctg aatccacgcc tgaacgccta tatcaccgtc agccacgcgc gcgcggtgga
     5221 tcaggcccgc gccgccgacg ccgcgctggc cgcgggtgac gcacggccgc tgaccggcat
     5281 tccactggca attaaagatc tgttctgcac cgagggcgtc cgaaccacgg ccggcagcaa
     5341 catcctcggc ccgttcgtcc cgccgtatga aagcaccgtc accgccaacc tgctgcgcga
     5401 cggcgccgtg ttcctgggca agacgaacat ggatgagttc gccatgggct cgtccaacat
     5461 gacctccgcc tacggtccgg tggaaaatcc ctggaagcgc aaacaggacg acaccgccgt
     5521 tctggtgccg ggcggatcct ccggcggctc cgcggcggcc gtggcggcca ggctggcgat
     5581 gggtgccact ggcaccgaca ccggcggctc gatccgccag ccggcatcgt tctgtggcct
     5641 tgtcggcgtc aagcctacct acggccgctg ttcccgctgg ggcgtggtcg ccttcgcgtc
     5701 ctccctcgat caccccggcc ccttcgcgcg caccgtccag gacagcgcca tactgcttgg
     5761 ttccatggcc ggctacgacc cgaaggattc caccagcgcc cggctaccgg tcccagactt
     5821 cgaagcggcc tgtgcccgag gcgtcaaagg cctgcggatc ggcgtaccgc gcgagtacca
     5881 ctccgacggc atgccagcgg aaatcgaagc gctatggcaa caagggatcg actggctgcg
     5941 tgacgccggc gccgagatcg tcgaggtctc cctgccgcat acaaagtatg gcttgccggc
     6001 ctactacatt gtggcgcccg cggaggcatc atcgaactta tcccggtatg acggtgtacg
     6061 gttcggaacg cgccagaacg gcgaggacct gcgtgacctg tatgaacgca cccgcgcgga
     6121 gggcttcggc ccggaagtcc gccgccgcgt gctgatcggc acctacgtgc tgtccgccgg
     6181 ctactacgat gccttttatc tgcgcgcaca gaaaatccgt tcgctgatcc tgaaggattt
     6241 caccgacgcc ttcacgaagg tggacgcatt gctcacgacc acggcaccga cggcaccgtt
     6301 cgcgcagggc gaaaacatgg acgatccggt caagatgtat ctgaacgact tgttcaccgt
     6361 accatcaaac ctggccgggg tgccggcggc atcgatccca gcgggattgg atgcgaacgg
     6421 cctgccggtc ggactacagg ttatcggcag gccgttcgac gaggaaaccg tcttcgccgt
     6481 ctccgccacg ctcgagcagg cggccggttt cgcggcaatg ccttcgctca gggcaggagg
     6541 ttaaacgtgg cctacacact cgaaggcagc accggtccct gggaggtcgt cgttggtctt
     6601 gaagtccacg cccaggtcgt cagcaacgcc aagctgttca gcggtgcggc aacagcattc
     6661 ggcgccgaac ccaacagcca agtcagcttc gtcgatgccg ccttccccgg catgctgcct
     6721 gtcatcaacg ccgagtgcgt ggcgcaggcg gtccgcacag gcctcggcct gaacgcgcgc
     6781 attaacacgg tcagccgctt cgaccggaag aactacttct atgcggacct gcccgccggc
     6841 taccagatca gccagttcga gcaccccatc gtcggtaccg gcgaaatcga ggtcgaactc
     6901 gccgacggct ccagcaaaac cattggcatc acccggctgc acctggaaca ggacgctggc
     6961 aagtcgatcc acgaccagca tcccacgaaa tcgctgatag acctgaaccg cgccggcgtg
     7021 gcactgatgg aaatcgtttc cgaacccgac atccgcagcc cggaggaagc cggcgcctat
     7081 gtccgcaagc tgcggtccat cctccgctac ctgggcacct gcgacggcaa catggaagaa
     7141 ggctccatgc gtgccgacgt caacgtctcg gtccgcaagc acggcgaacc ctaccgcacc
     7201 cgctgcgaga tcaagaacgt caactccatc cgcttcgtca tgcaggcggt ggagaccgaa
     7261 gccgcgcgcc aggtcgaggt ctgggaagcc ggcggtaccg tcacccagga aacccgcctg
     7321 ttcgacagca accgtggcat gacgcgatcg atgcgatcga aagaagatgc ccacgactat
     7381 cgttatttcc ccgacccgga cctgctgccc ctggtgctgg aggaagactg gatcgcgacc
     7441 ctgaaagccg ccctgcccga acttcctgac gccaagcgcg ctcggtttat acaatcgtat
     7501 ggactaacgc cgtacgacgc cgcggttctg gtggccgaaa aagctacggc cgacttctat
     7561 gaaatcgtcg ccaagggccg tgacccaaag atcgcagcca actggatcac cggcgatttt
     7621 ttcgccgcga taaaccgcct cggccgctcg atcgaggacc cacccgtcac cgcggtccaa
     7681 ctcggtggcc tgctggacct gatggcggac agcacaatca acggccgcat tgccaaggac
     7741 gtgttcgagg cgatggtgga aaccggtaag gacgccgcca cgatcgtgga cgagaagggc
     7801 ttgcgccagg ttaccgacac aggcgcgatc gaccaagccg tggaccgcat tctggcggca
     7861 aacccggaca aggtggcgga ataccggtcg ggcaaagaca aactgttcgg tttctttgtc
     7921 ggtcagacca tgaaggctat ggcggggaag ggaaatcctg ccctgatcaa cgaaaccctg
     7981 aagcgccatc tggcgccccg gaaggagtag gctggccgtt cgaggtcacc ccgttccggc
     8041 cagcctatcc ctacttccga atgcgaatga tcttgacctt tatgatccag atcaccagaa
     8101 tcttccgcag ggtaacccga tggattgtgg ccatcgatac ctccttcgct gacggcggcc
     8161 gggtcattcc ggccgctgtt ctcgtttaag gaggcttcgt taacgaaccc ttagcccgtc
     8221 cgagcgtacc gcgcccgcaa cggcttcagc gccgcgatcg ccagtgccgc ggttaccaga
     8281 tcggcggcga tcgccacgcc gaacaccggc gtccacgacc ccgtcgcccc gtgcagcagc
     8341 gacgccatcg ggccgccgaa gatcgccccg atcccctgcg cgatatacag acatccgtag
     8401 ttctgggtgg cgttgcgcgt gccgaacgtg tcggtcagcg tcgccgggaa cagcgagaat
     8461 atctcgcccc agccgaaaaa caccacgccg gacagcagca cgaacagcag cgggtcactc
     8521 cgcgtcgcca gccaaagcgc catcgccacg ccctccagtc cgaacgccag acccatggtg
     8581 ttctcgcggc cgatccggtc cgacacccag ccgaataacg gtcgggtcag cccgttggtg
     8641 aaccggtcca cgctcagcgc cagcggcagc gccgcgaggc cccagaccgt tgccttggtg
     8701 ataccgaact caccggcgaa tgccgccatc tgcgagatga ccatcagtcc cgaagtcgcc
     8761 atcagcgcca tcatcacgaa catcagccag aagatcggcg aacccagcat gcttccggtt
     8821 gaaacgccgc gtgcattctg ggctgcgatg gcggatgtcg gtgcaggctt cagacccagg
     8881 gccgccacca ggccgaccaa tgcgaagatc gcgccgtatt gcagcagcgt catctggtaa
     8941 ccgaccgccg ccagcgaatt ggcgatcggg aacgtcgtca gaatggcacc gatgccatag
     9001 cccgccgcaa ccacgcccgc cgcgaagcca cgccgatccg ggaaccagcc gaccatctgg
     9061 ccaaccacgc ccacatacac gatgccggta ccaagaccgc cgaccactcc gtacgtcaga
     9121 tacagcatcg tcagcgacga ggcataagat gccagcaccc atgaaagccc ggacagcagg
     9181 cctcccacgc cgatcagcag tctcgggccg aacttgtcca ccaaccagcc ctggaacggc
     9241 gagaagaacg tctgcagcac gatcagcagt gagaacgtga cctgcaacga cgccggcgcc
     9301 acccccaagg cggtgcccag cggcttggtg aacaaggtcc acacatattg cgggctggag
     9361 atcgccatca tgcagatcaa ccccaggccg agttggcccc aacgggtcag accttgcgtg
     9421 gcgacggcag gcaggcgtgc ggcagtctcg gtcatgctga tcggccctct tcggcaaccg
     9481 gtcagtccta gcaaacgcta cgccatccta atcgcacgag tcacggcacg gcaggcaaaa
     9541 atatgcctat tttcgcacca tttcgcagca tatgtgctgc gttttcagtc gatggaaaag
     9601 ctcgtcccac acccgcatgc cgactttgca ttcggattgc gcaccgcgaa gtggcttccc
     9661 atcagctcat cggtgtaatc cagttccgat ccgctcagta ggtccaggct caccgaatca
     9721 acaacgaccc gggcggggcc ccgctcgatg accaggtcgt caggctgggt ttgcgggtcc
     9781 aactcgaagc gatactggaa cccgctgcat ccccccgcca gcacggccac ccgcaatgcg
     9841 gtttcggttg cctgattggc ctcggcgacg atctcggcga tccgggtggc ggcgcgatcg
     9901 gtaacggcga actgttccat acggctaaca taggcgcttc cctgccggaa ttgaagccac
     9961 ccgattgaag ccattccacc cagggtgtat ccgcgtggca tgtacgttcg ccccccgccg
    10021 gctcgctacg cagtgtccgc cgccaccgcg cgtggccggc tgcatcacga gccggaggcg
    10081 gaaacccgct ccccctggca gcgcgaccgt gaccgcatca tccacagttc ggcgttccgg
    10141 aagctgcaat acaagaccca ggtcttcgtc aaccatgagg gcgactttta ccgcactcgc
    10201 ctgacccaca gcatagaggt cgcccaggtc gcccgctcca tcgcccgagc cctgggtctc
    10261 gacgaggacc tcaccgaagc cctcgctttg gcccacgacc tgggccatcc gccattcggc
    10321 cacgccggtg aggaggcgct caacattgcc atgaagccgt tcggcggctt cgaccacaac
    10381 gcccagagcc tgcgcatggt gaccttgctg gagagccgct acggcggctg ggacggcctg
    10441 aacctgacct gggagaccct cgaaggcctg gtcaagcaca acggcccgct acgccatccc
    10501 gccccctaca tcgtcgaata caacgaccgc cacaagttgg acctgcacac ccaacccagc
    10561 gccgaggccc aggtcgccgc catcgccgac gacgtcgcct atcactccca cgacctcgac
    10621 gacggtctgc gcgcgcgcct gtttactgtt gacgatctga aacatctgcc ggtggtcggc
    10681 gagtccctgt ccgcggcccg tatgtccagc ctggacgtcc cgcccccccg cctgcgccac
    10741 gaaacgctgc gccgggtgat caacgccatg gtcaccgacc tgaccaccga gtccagccag
    10801 cgcctcgcca aactggatcc ggacagcccc gacgccattc gccgccacaa gcagcgcgtc
    10861 atcagcttca gtgcccgcat ggccgacgcc aaccaggcga tcaaggactt cctgttcgct
    10921 cgcatgtatc gccactggcg cgtcaaccgc atgtccgcca aggccaggcg tttgaccgag
    10981 gacctgtatc gcctgctcca cgccgacccc acccttctgc cggacgactg gcgtgcacgc
    11041 gccggggaag cgggcgtaca gcgctccgcc accatcgtcg gcgactacgt ggccggcatg
    11101 acggaccgtt atgcgatgga cgaacaccgc cggctgacgg acatcagcgt caacggataa
    11161 gcagcagcgc tggtgtcctg ccccagaagt tcgtcgcatc ttgggtttct gggcccggca
    11221 ggc
//
LOCUS       DATAVD010000049         1738 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2238316, whole genome shotgun sequence.
ACCESSION   DATAVD010000049 DATAVD010000000
VERSION     DATAVD010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2238316"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..334
                     /locus_tag="VHX39_00860"
     CDS             <1..334
                     /locus_tag="VHX39_00860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit A"
                     /protein_id="HEX3989697.1"
                     /translation="PQFFTATGVGTRMAVGKEHREIDGRTYILENALRGDVGLVEAWE
                     ADRWGNLTYKLAGRNFNPVVAMASDLTIVQTQHIRELGELHPDHVVTPSIFVNRVLHV
                     PYGDPGTF"
     gene            425..1087
                     /locus_tag="VHX39_00865"
     CDS             425..1087
                     /locus_tag="VHX39_00865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit B"
                     /protein_id="HEX3989698.1"
                     /translation="MSEAATTFKPFSRPQMARLVADDIPEGWFVNLGIGIPTAVADHV
                     PLEREVIFHSENGVLGMGPAPDKDHIEPWLINAGKQYVTLRAGGSICHHADSFSMIRG
                     GHLDLCVLGAFQVADNGDIANWATSENDTAPAVGGAMDLAAGAKRLWVLMEHTTKDGT
                     PKLVTKCSYPLTAQSCVKRVYTNLAVVDVTDRGFVVRQMAPGLSFEDLQARTDAKLHL
                     PA"
     gene            1215..1511
                     /locus_tag="VHX39_00870"
     CDS             1215..1511
                     /locus_tag="VHX39_00870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989699.1"
                     /translation="MSDPRGRVEICAGDWSRVERYRFGTGTADFLLCRTCGVYIGALC
                     ETAHGPRAVTNVNSLADRAAFAPASSFPDHDEEAVEARLARRAANWTPAFVLGD"
     gene            complement(1554..>1738)
                     /locus_tag="VHX39_00875"
     CDS             complement(1554..>1738)
                     /locus_tag="VHX39_00875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989700.1"
                     /translation="SGRMITVHDIYSFDPNAKVELEEFTDVIGRNFRQPEQGFGFDNS
                     PVAHMWRAMIRPAKYL"
BASE COUNT          307 a          572 c          543 g          316 t
ORIGIN      
        1 cccgcagttc ttcaccgcca ccggcgtcgg caccagaatg gccgtcggca aggaacatcg
       61 cgaaatcgac ggccgcacct acatcctgga aaacgcgctg cgcggcgatg tcggcctggt
      121 cgaggcgtgg gaggctgacc gttggggcaa cctcacctac aagctggcgg gccggaattt
      181 taatccggtt gtcgccatgg cctccgatct caccatcgtc caaactcaac acattcgtga
      241 actgggcgaa ctgcatcccg accacgtcgt taccccgagt atcttcgtga accgtgtgct
      301 gcacgtgccg tacggcgatc cggggacgtt ctgaacgatg tcgcgcctgc cgtcatggcc
      361 gggcctgtcc tggccatcgc atcccacaca acccgcgccg tgactgcgaa gtaaggagac
      421 gcccatgtcc gaagccgcaa cgaccttcaa accgttcagc cgcccgcaaa tggccaggct
      481 ggtcgccgac gacatccccg agggctggtt cgtcaacctc ggcatcggaa tccccaccgc
      541 cgtcgccgat cacgtgccgc tcgagcgcga ggtgatcttc cattccgaga acggtgtcct
      601 cggcatgggg ccggcgccgg acaaggacca catcgagccc tggctgatca acgccggtaa
      661 gcaatacgtg acgctgcgcg ccggtggcag catttgccat cacgccgaca gtttctcgat
      721 gatccgcggc gggcacctgg atctttgcgt cctcggcgcc tttcaggttg ccgataacgg
      781 cgacatcgcc aactgggcta ccagcgagaa cgacacggcc ccggcagtgg gcggtgccat
      841 ggatctcgct gctggagcga aacggttatg ggtgctgatg gagcacacca ccaaggacgg
      901 cacgccgaag ctggtgacga aatgctccta cccgctgacc gcgcagagtt gcgtcaagcg
      961 ggtctacacc aatctcgctg tggtcgacgt caccgatcgc ggcttcgtgg tccgtcagat
     1021 ggcgcccggc ctgtcgttcg aggacctgca agcccgcacc gacgcgaagc tgcatctgcc
     1081 ggcctgacat ggtgcacgag ggcggctgtc attgcggcaa tctgcgagtg cggctggcgt
     1141 tgacccgacc gcctgccgag tacgccacac ggtcgtgcag ctgttcgttt tgccgcgcgc
     1201 atgccacgcg caccgtgtcg gacccacgcg gccgggttga aatctgcgcg ggcgactggt
     1261 cgcgggtcga gcgttaccgt ttcgggaccg gcactgcgga ttttctgctt tgccggacgt
     1321 gcggcgttta tatcggcgcg ctatgcgaga ctgcacacgg cccgcgcgcc gtcaccaacg
     1381 tcaatagcct ggcggatcgc gccgcgttcg ctccggcgtc atcgtttccc gatcatgacg
     1441 aggaagcggt tgaggcaaga ctggcgcggc gggcagcgaa ctggacgccg gcgttcgtac
     1501 tgggcgattg aacgttctgg cggggccggc cgaccccgcc gcacgtcagg atcctacaga
     1561 tacttcgccg gccggatcat cgcccgccac atatgggcaa ccgggctgtt gtcgaacccg
     1621 aatccttgtt ccggttggcg gaaattacgg ccgatcacgt ccgtgaattc ctccagttcg
     1681 acctttgcat tggggtcgaa cgaatagatg tcgtgcacgg tgatcatccg tccggaca
//
LOCUS       DATAVD010000050         5177 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2982334, whole genome shotgun sequence.
ACCESSION   DATAVD010000050 DATAVD010000000
VERSION     DATAVD010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5177
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2982334"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..290)
                     /locus_tag="VHX39_00880"
     CDS             complement(<1..290)
                     /locus_tag="VHX39_00880"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3989701.1"
                     /translation="MAPVMIVTGGSQGIGAAVARLAGARGYAVALTYQSNRGLAEAVV
                     AAITAGGGRAIAVQTEMADEASIHALFRVVDETFGPVTVLVNNAGGPGPTCRL"
     gene            complement(354..1181)
                     /locus_tag="VHX39_00885"
     CDS             complement(354..1181)
                     /locus_tag="VHX39_00885"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HEX3989702.1"
                     /translation="MLICQLTDLHACAVGMSSNRVSETNMLTTRAFRAVAAMRPMPDV
                     VVITGDLTESGMPAEYANLAALIRQYLSMPVYVIPGNHDRRDNFRRGLALLPGVTADP
                     VYVQYAVEDYPVRLVMLDTVVFGHGHGELSDDQLSWLDRTLASVPDKPTMIGMHHPPF
                     GCGIAHMDRINLRNAEAFNAVIARHPQVRRIICGHHHRPIFAQVAHAIASISPSVAHQ
                     VELSFDPADKGAFNFEPPAFQLHRWSAADGIVTHTAYVDTFPGPFPFVAAPDYPGRS"
     gene            1347..4139
                     /locus_tag="VHX39_00890"
     CDS             1347..4139
                     /locus_tag="VHX39_00890"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX3989703.1"
                     /translation="MLSRFIALWPRPGQSRSGLLLAACGLGIGLILATAVTWYSATSR
                     QAVIHDSVREMTNDALLLAEQEDRLLQSADTVELGLLDQMRAKGVDSPENFARLMGTR
                     EIHDNLKERIAGLPYVTGLLLFDAHGALLNFSRRWPPPALNGSDHDFIRDATISGAPF
                     VSAPSLGKVTGQWEIYLSRRFEAADGRLIGFVVSTIQIQYFEQFYARLPLTGGGSYAL
                     YRRDGMLLARYPPVDLQVGKIYAQTINFGLLLNALDHGSVRMTSLLDGKDRLIVPHAM
                     ANFPLVIAVTDTMDSILGPWRVQARILVATTSLLELMIAGTLLLAVRHLRGQQRLQAA
                     QTARTRAEAELAVAEEHERAAVALRVQERRFDTAVQNMPQGLIMLDTSGKLLAINRTF
                     CEGAGVPMELLPLGTSYARLTELLLTMGHTTSEDLAELRRRREDVTEPNGSTTFVWER
                     NDGLSFRATIQRVEEGWLTTYEDITERRAAEARIAHMAQHDALTGLPNRVLFHETLEN
                     ALALARRGHPVALHCLDLDQFKAVNDTLGHPVGDALLRQVAQRLQDGVRETDTVARLG
                     GDEFAIVQTAIGTPLDAAALARRLNGLLEMPFTIDGHQIVIGTSIGIAFAPQDGVDPD
                     EVLKCADLALYRAKHDGRGVYRLFEAEMDAAIQARRVLEMELRQALPGGQLELLYQPQ
                     IDVRRGRVAGCEALLRWQHPTMGLVSPDHFIGLAEETGLIVPIGEWVLRQACNTACRW
                     PKPSKIAVNVSAVQFRSNGLVDVVIAALRESGLPASCLELEITESVMLQDTDATLATL
                     HQLRELGVQIAMDDFGTGYSSLSYLRRFPFDRIKIDKSFISELGKRDDCIAIVRAVIA
                     LARDLGIEITAEGVETRQQLEMLEQAGCDEIQGYLFSQPVPEAAVMGLLRSMPVLAEI
                     WPAAGVQARSRPVEAL"
     gene            complement(4263..>5177)
                     /locus_tag="VHX39_00895"
     CDS             complement(4263..>5177)
                     /locus_tag="VHX39_00895"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3989704.1"
                     /translation="NGQVYGVPFQNSTPLLYYSVDAFKEAGLDPERPPVTWQDWVDDL
                     RKLAKHDGAQTSRWGLMFPGTTDYLGWITSGLAMSNGGQYYNTGYGGEVYYNEPSTLG
                     AVRFIDALVHKWKVMPEGVTDANAVTTAFFQGRTAMMVLSTGSLSFVRENMKTAYKVA
                     FLPRALVNAAPIGGASLIIPRGNSPERQAAAWTLVKWLVSPEIAGGWSRFTGYFAPRI
                     AAYDLPEMKEYMAKYPDAKVALDQLAYARGWFSTYNTVAVRKALEDGVQAVLSGKMTP
                     EDAVAAAQKQADALMKPYVDQTALKLPE"
BASE COUNT          968 a         1628 c         1613 g          968 t
ORIGIN      
        1 agccggcagg tcggcccagg accgcccgcg ttgttcacca gcaccgtcac tgggccgaag
       61 gtttcgtcaa ccacgcgaaa caacgcatgg atggaagcct cgtcagccat ctccgtctga
      121 accgcaatcg ctcgcccgcc gccggcggta atggcagcga ccacggcctc cgccagcccc
      181 cgattgcttt ggtaggtcag tgcgacagcg taccctcgag ccccggccag ccgcgcgacg
      241 gcggcgccga tgccctgact gccgccggtg acgatcatga ctggcgccat ttcgccgctc
      301 cctcatttgt tgtcgtgcac catggacccg acctgcggcc gacggcaacc gcgtcacgac
      361 cggccaggat agtccggcgc tgcaacgaac ggaaaaggac ccgggaacgt atcgacatag
      421 gcggtgtggg tgacgatccc atccgccgca gaccagcgat gcaactggaa cgccggcggt
      481 tcaaagttga acgcgccctt gtcggccgga tcgaaactca gctccacctg atgcgccacc
      541 gaaggagaaa tcgaagcaat cgcgtgtgct acctgagcaa aaatcggccg atgatggtgg
      601 ccgcagatga tccgccgcac ctgtggatgc cgcgcaatga ccgcgttgaa agcttcggca
      661 ttgcgcaggt tgatccgatc catatgggcg atgccgcagc cgaacggcgg atgatgcatg
      721 ccgatcatcg tcggcttgtc cggcaccgag gccagtgtgc gatcgagcca gctcagctgg
      781 tcatcgctca actcgccgtg cccatggccg aacaccaccg tgtccagcat gaccaaccgc
      841 accggataat cctcgacggc gtactgcaca tagaccggat ccgcggtcac gcccggcagc
      901 agcgcgaggc cgcgccggaa attgtcgcgc cggtcatggt tgccggggat gacatagacc
      961 ggcatcgaca gatactgacg gatcagcgcg gcgaggttgg cgtattctgc aggcatccca
     1021 ctctcggtca aatcgccggt gatgaccacc acgtccggca tcggccgcat cgcagcgacg
     1081 gcgcggaacg cgcgcgtggt caacatattg gtttccgata cgcggttgga tgacattccg
     1141 acggcgcaag cgtgcaggtc ggtcaattgg cagatcagca tcgggcgact ccttgggcag
     1201 cggtgagggc gtgacggccc gggtatgacc cattgtggca ggttcggagc ggattgctcc
     1261 accgcacgtc tcggcttctg ccttgacgtt aatggatatt taacgggttt ccgccaaagc
     1321 ttgtggcgcc gaatggaatg cgcctcatgc tgtcacgctt catcgcgctc tggccgcgcc
     1381 cagggcagtc ccgctccggg ctgctgctgg cggcctgcgg tctgggcatc ggcctcattt
     1441 tggcgacggc ggtgacctgg tacagcgcca cttcgcggca ggctgtcatc cacgactccg
     1501 tgcgcgaaat gaccaacgat gcgctgctgc tggccgagca ggaggaccgg ctgctgcagt
     1561 cggccgacac cgtggagctt ggcctgttgg atcagatgcg cgccaagggc gttgactcgc
     1621 cggaaaactt cgcgcggttg atgggcacgc gcgagataca cgacaacctc aaggagcgga
     1681 tcgcgggcct gccttatgtc accgggctct tgctgttcga cgcgcacggc gcgctgctca
     1741 acttctcccg gcgctggccg ccgcctgcgc tcaatggctc cgatcacgac ttcatacgcg
     1801 atgcgacgat ttcgggagca ccctttgtca gcgcgccgtc gctcggcaaa gtcaccggcc
     1861 agtgggagat ctatctgagc cgccggttcg aggcagcgga tgggcgactg atcggcttcg
     1921 tggtcagcac gatccaaatc caatattttg agcagtttta tgccaggctg ccgctgaccg
     1981 gaggcggctc gtacgcgttg tatcggcgcg atggcatgct gctcgcacgt tacccgccgg
     2041 tggacctgca agtcggcaag atttacgcgc aaacgataaa tttcggcctg ctgctgaacg
     2101 cgctggatca cggttcggtc cgaatgacca gcttactgga tggcaaggac cggctgattg
     2161 tgccgcacgc catggcaaat tttccgctgg tcatcgcagt gaccgacacg atggattcca
     2221 tccttggccc ctggcgggtg caggcccgta tcctggtcgc cacgacatca ctgctggaac
     2281 taatgatcgc cgggacgttg ttgctggccg tgcgtcacct gcgcggccag caaaggctgc
     2341 aggcagcaca aaccgcgcgg acccgggccg aggcggaact ggccgtcgcc gaggaacacg
     2401 aacgggccgc cgtcgcactg cgagtgcagg aacgccgctt cgatacggcg gtgcaaaaca
     2461 tgccgcaggg cctgatcatg ctcgacactt caggcaaact gctggcgatc aaccggacat
     2521 tttgcgaagg cgccggcgtg ccgatggaat tgctgccttt gggcacgagc tacgccaggc
     2581 tgaccgagct gcttctgaca atggggcata ccacaagcga ggatttggct gagttgcggc
     2641 gccgtcgcga ggacgtgact gagccaaacg gcagtaccac tttcgtttgg gagcgtaatg
     2701 atggcctttc cttccgggca accattcaac gcgtggagga aggctggctc acaacttatg
     2761 aagatatcac cgaacggcgc gcggccgagg ccaggatcgc ccatatggcg cagcacgatg
     2821 cgctgaccgg gttgcccaac cgcgtgctgt tccacgaaac gttggaaaac gcgctggcac
     2881 tcgcgcgccg gggtcatcct gtcgcgctgc attgcctcga tctcgatcag ttcaaggcgg
     2941 tgaacgacac tttgggtcat ccggttggcg atgctctgtt gcgacaggtc gctcagagat
     3001 tgcaggacgg ggtgcgcgag accgatacgg ttgcccgcct tggcggcgac gaatttgcca
     3061 tcgtgcaaac cgccattggc acgccgctgg atgctgcggc gttggcccgc cggttgaacg
     3121 gactgctcga aatgccgttc accatcgacg gccatcaaat cgtcatcggt accagcatcg
     3181 gcatcgcgtt cgcaccgcag gatggggtgg atcccgacga ggtgttgaaa tgtgccgacc
     3241 tcgcactgta tcgggccaag cacgacgggc gtggcgtgta ccggcttttc gaggccgaaa
     3301 tggacgcggc gattcaggct cgcagggtgc tggaaatgga actgcgccag gcgttgccgg
     3361 gcgggcaact ggaattgctc tatcaaccgc aaatcgatgt ccggcgtggc cgggtcgccg
     3421 gttgtgaggc gctgttgcgc tggcagcatc cgacgatggg attggtgtcg cctgatcact
     3481 tcatcggttt ggccgaggag accggcctga tcgttccaat cggcgaatgg gtgctccgcc
     3541 aggcctgtaa caccgcatgt cgttggccga agccgtcgaa gatcgccgtc aatgtgtcgg
     3601 cggtacagtt cagaagcaat ggcctggtcg acgttgtgat cgccgcattg cgagagtccg
     3661 gtctgcccgc cagttgcctg gaactggaga tcaccgaatc ggtgatgctg caggataccg
     3721 atgccacgct cgcaacgctg catcagttgc gcgagcttgg ggtccagatc gccatggatg
     3781 atttcggtac cggctattct tcgctgagct atctgaggcg gtttcccttc gatcggatca
     3841 agatcgacaa gtccttcatc agcgaactcg gcaagcggga cgattgcatt gcgattgtgc
     3901 gcgcggtgat cgccctggcg cgcgacctcg gcatcgagat caccgccgaa ggggtcgaga
     3961 cacggcaaca actcgaaatg ctcgagcaag cgggctgcga cgaaatccag ggctatttgt
     4021 tcagccagcc ggttcccgaa gccgcggtga tggggttgct gcggtcgatg ccggttctgg
     4081 cggaaatctg gccggcggcg ggcgtgcagg cgcggtcccg gccggtcgag gcattgtagc
     4141 attttccggc ggattttccg cgtgccacgg tgcggcccgc ggtaaccgcc agcggtcgca
     4201 ggtagcgatc ataaggctga attctgcgac cgcgcccagt acccaaccca gcgtgcgacg
     4261 tcctactccg gcaacttcaa cgccgtctga tccacgtacg gcttcatcaa cgcatccgcc
     4321 tgtttctgtg ccgcggccac tgcgtcctcc ggcgtcatct tacctgacag caccgcctgc
     4381 acgccgtcct ccaacgcctt gcgcaccgcc accgtgttgt aggtggagaa ccaaccacgg
     4441 gcataagcca actgatccag cgctaccttg gcatccggat acttcgccat gtactccttc
     4501 atctccggca ggtcgtaagc ggcgatacgc ggcgcgaaat acccggtgaa gcggctccat
     4561 ccgccggcaa tctccgggct gaccagccat ttcaccaagg tccacgctgc cgcctgacgt
     4621 tccggcgagt tgcccctggg aataatcagg ctggccccgc cgatcggcgc cgcgttgacc
     4681 aatgcgcgcg gcaggaacgc caccttgtac gcagtcttca tgttctcccg cacgaacgac
     4741 agcgagccgg tcgacaacac catcatcgcg gttcgcccct ggaaaaacgc cgtcgttact
     4801 gcgttggcat cggtcacgcc ctccggcata actttccact tatgcaccag cgcgtcaatg
     4861 aaacgcaccg cacccaatgt actgggctcg ttgtaataaa cctcaccgcc atagccggtg
     4921 ttgtaatact ggccgccatt ggacatcgcg aggccactgg tgatccagcc cagataatcg
     4981 gtggtgccgg gaaacatgag cccccaccgc gaggtctgcg cgccatcgtg ttttgccagt
     5041 ttgcgcagat cgtcaaccca gtcctgccag gtgaccggcg gccgctcggg atcaaggcca
     5101 gcctctttga acgcatcgac gctgtaatac agcaacggcg tcgagttctg gaacggtacg
     5161 ccataaacct ggccgtt
//
LOCUS       DATAVD010000051         2938 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2238337, whole genome shotgun sequence.
ACCESSION   DATAVD010000051 DATAVD010000000
VERSION     DATAVD010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2938
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2238337"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..709)
                     /locus_tag="VHX39_00900"
     CDS             complement(<1..709)
                     /locus_tag="VHX39_00900"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3989705.1"
                     /translation="MPPAAILRARLRAASGRPKAQLSLAGQLAQNGASIEAVRHIAHA
                     AQYGLPEAQARLGMCYLRGLGVPANQAEARHWLDRAADGGDVTAQTELASLALQGISG
                     PYRRTAFPVREDRTEPNLEQAAVLARRAADNGSAEGQALLAYIMGLAPSVPQQPGEAE
                     KLYRAAAVGGAPLGQLGHAMALLRVGTAEATREAHDQMTAAADAGLATAQFMLGAMAE
                     AGIGREPNLEAAAKHYRS"
     gene            866..1372
                     /locus_tag="VHX39_00905"
     CDS             866..1372
                     /locus_tag="VHX39_00905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3989706.1"
                     /translation="MSIVPIQGLWETHLTVADLDRSIAFYRDVIGLTLAHTVPERHAA
                     FFWIGQPRQAMLGLWCIHTSPMAMKLHYAFQVTLDNVVASVAALRRAGLEPVSGGAGR
                     PLDEPEVIPWIPAASVYFKDPDGHSLEYIAMLPEPPQPKMQRVMLSEWRRLRADGTIG
                     EGPAAGHP"
     gene            complement(1443..1661)
                     /locus_tag="VHX39_00910"
     CDS             complement(1443..1661)
                     /locus_tag="VHX39_00910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989707.1"
                     /translation="MRPVNIGFGTVAFELDPDADRRELIDAAGLRRLGVSEPVIKMHL
                     DYGKRHRRADLSADPGDRGQDASNGVDY"
     gene            complement(1769..2668)
                     /locus_tag="VHX39_00915"
     CDS             complement(1769..2668)
                     /locus_tag="VHX39_00915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989708.1"
                     /translation="MKLRLKLPDGLRAVKPYLDCRRDPAFPHYAMDEATRDAIMPPNT
                     LTSRDQEIREHENARLGFDPLQRTWEMTITDPIVGYNYQLRWRLPPDTIDPTIRAEVV
                     AAQRQLLAAGDRDQHPTAWGTFDEHRLLIEGFLRDNRDPNEKRGLEVFIYDRSRLDLV
                     PVFSYRSWLPGPLPQNFRIGLGDGIAGVAFQQRRIVPWSGLTQDDPFIQPVPYPNVPG
                     EDPMKLTTMIAFPIYHSKFAKGRPPSWSVIGTVCFSSSSEASMIAGMCTTERTTDIEQ
                     LMFTAERYSQDMVQDILETLAAP"
     gene            complement(2665..>2938)
                     /locus_tag="VHX39_00920"
     CDS             complement(2665..>2938)
                     /locus_tag="VHX39_00920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989709.1"
                     /translation="IVSYESARSLRCFRGSEQMVTRIAHLSDLHFGKRFDVDTWNAVK
                     DDVAGFMPHLLVVSGDLVDDPSPLHLLAAKGELDQLKATANIRSNS"
BASE COUNT          536 a          921 c          923 g          558 t
ORIGIN      
        1 cactccggta gtgcttcgcg gcggcctcga gatttggctc tctgccgatc ccagcctccg
       61 ccatcgcacc gagcatgaat tgagcggtgg ccaacccggc gtcggccgcc gcagtcatct
      121 ggtcatgcgc ctcgcgcgtc gcctcggcgg tgcccacacg aagcaacgcc atggcgtgac
      181 ccagttgccc gagcggcgca ccgccaacgg cggcagcgcg atacaatttt tccgcctcgc
      241 ccggttgctg cgggaccgag ggggccagcc ccatgatgta ggcaagcaac gcctggccct
      301 ctgccgagcc gttgtccgcc gcccgacggg ccagcaccgc ggcctgttcg agattgggtt
      361 cagtgcggtc ctcccgcacc gggaaagcgg tgcgccgata cggcccggag atcccctgca
      421 acgccaaaga cgcaagctcg gtctgcgcag tgacatcgcc cccgtccgcg gcacggtcca
      481 gccaatggcg cgcctccgcc tggttcgccg gcaccccgag gccacgcagg taacacattc
      541 ccagtctcgc ctgggcttcc ggcaaaccgt actgggcggc atgcgcgatg tgtcgtactg
      601 cctcgatcga ggcgccgttc tgggccagtt gcccagccag gcttagctga gcctttggcc
      661 gccccgaggc ggcgcgcaaa cgggctcgaa ggatggcggc aggcggcatt gcgaccttct
      721 tgtcggtgaa tgatccgggg atcagagcgc aaattggttg atgatggatt aacaaacggt
      781 ccaacttttg ggttcgggca acgtggccac ctggccaaac gccgccggac ggtgcagcct
      841 gcccgtgcaa cagcgggagg ccagcatgtc gatcgtgcca atccagggct tgtgggagac
      901 ccaccttacg gttgccgatc tcgatcgctc gatcgcgttc taccgggatg tgatcggact
      961 gacgttggcc cataccgtgc cggaacggca tgccgcgttt ttctggatcg gccagccgcg
     1021 gcaggcaatg ctcggtctgt ggtgcattca tacctcgccg atggctatga agctgcacta
     1081 cgcgttccag gtcacgctgg ataacgtggt ggcctcggtt gctgcgttgc ggcgggccgg
     1141 actggagccg gtgtcaggcg gcgccggccg gccgctcgac gagccggaag tcatcccatg
     1201 gatccccgca gccagcgtct atttcaaaga ccccgacggc cactcgctgg aatacatcgc
     1261 gatgttgccg gagccgccgc aaccgaagat gcaacgggtg atgctgtcgg aatggcgaag
     1321 gctacgtgcg gatggcacaa tcggcgaggg cccggcggcc ggacacccgt agtgcacgtc
     1381 gcctgcgggg tgtttgcagc ttgtcgcgcc gcgttcaggc ctgccttgcg cttttgcgat
     1441 cgttaataat cgacgccgtt gctcgcgtcc tggccccggt cacccggatc ggcggagagg
     1501 tctgcgcgac ggtgccgttt gccgtaatcc agatgcattt tgatcaccgg ctcgctcacg
     1561 cccagtcggc gcaacccggc cgcgtcgatc agttccctgc ggtccgcgtc cggatccaat
     1621 tcgaaagcca cggtgccgaa gccaatatta acgggccgca tggggagccc ctcggtagct
     1681 gagtgaaaac tgggttgtga aggtagtgcg gcagcaatgc tgacgcaagc ccgacgtgct
     1741 cctcgcgtgc cggtggtccg gggcgaactc acggcgctgc cagcgtttcg aggatatcct
     1801 ggaccatgtc ctgagaatag cgttccgcgg tgaacatcaa ttgctcgatg tccgtggttc
     1861 gctccgtggt acacataccc gcgatcatcg atgcctcgga gctggagctg aagcagaccg
     1921 tgccgatgac cgaccaagag ggcggccgtc ccttggcgaa cttcgaatga tagatcggga
     1981 atgcaatcat ggtcgtcagc ttcattggat cttcgcccgg cacattcgga tagggcaccg
     2041 gctgaatgaa tggatcatcc tgggtaagac ctgaccacgg tacaatccgg cgttgctgga
     2101 atgcgacccc ggcgatcccg tcaccgaggc caatcctgaa attctgaggc aacgggccgg
     2161 gaagccagga gcggtaactg aacaccggga ccagatcgag tctggagcga tcataaatga
     2221 acacttccag gcctcgcttc tcattggggt ctcggttgtc gcgaaggaac ccctcgatca
     2281 acagccggtg ctcgtcgaac gttccccacg ccgtcggatg ttggtcccga tcaccggccg
     2341 ccagaagctg cctttgcgca gccacgacct cggcccggat ggtcgggtca attgtgtcgg
     2401 gcggcagccg ccagcgaagt tgatagttgt atcccacgat cggatcggta atcgtcattt
     2461 cccaggtgcg ctgcaatgga tcgaagccga gccttgcatt ctcatgttcg cggatttcct
     2521 ggtcacgcga agtcagggtg ttcggcggca tgatcgcgtc tctggtcgcc tcgtccatcg
     2581 cgtaatgcgg gaacgccgga tcacgacggc aatccagata tggcttcacc gcacgcaaac
     2641 cgtccggcaa tttaaggcga agcttcaact gtttgaccgg atattggcgg ttgccttcag
     2701 ttgatccagt tcccctttcg cggcgagcag gtgcagtggc gagggatcgt caacaaggtc
     2761 gccggatacc acgagcagat gcggcatgaa gccggccacg tcgtctttga ccgcgttcca
     2821 ggtatcgacg tcgaaacgtt tgccgaagtg cagatcggac aaatgcgcaa tgcgcgtgac
     2881 catctgttca ctcccacgaa aacagcgtaa cgaccgggca ctttcatatg aaacgatg
//
LOCUS       DATAVD010000052         3766 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1680278, whole genome shotgun sequence.
ACCESSION   DATAVD010000052 DATAVD010000000
VERSION     DATAVD010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3766
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1680278"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            184..1038
                     /locus_tag="VHX39_00925"
     CDS             184..1038
                     /locus_tag="VHX39_00925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989710.1"
                     /translation="MPDSRSQEGTMFGFPAETVHTWSNALFIMAIVFAAVLSFLIFQS
                     SSLVMADKQRALDAYKSEAQVMVTAAQKDGDAARAAIARSREHGTALAVRAAGLEKDV
                     ADARERIADLEKQTASATATAEQAVNERTQLKAMLEHEKTSRAEFESQFSWRVLSDEQ
                     RSTLMQQLSGAAHAVAIEFPGGDQEAQFLSLQLTKVFQDAGWKVALRSNPSAPLLFGL
                     NVPGPANDVVNLVRQALAGIDMKPSELDAPATHTGEAARSTPECRIMVGGKLTDVVRR
                     VLATSQAR"
     gene            complement(1085..2260)
                     /locus_tag="VHX39_00930"
     CDS             complement(1085..2260)
                     /locus_tag="VHX39_00930"
                     /inference="COORDINATES: protein motif:HMM:NF021493.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadG family pilus assembly protein"
                     /protein_id="HEX3989711.1"
                     /translation="MPTWLGLRDRGSMGTLIAIGVIPGMIGFGCLSIDKGYYGYRSLL
                     LKQTVEAAALAGGNKLTTYYTSNGSTATIVATAQAFTTANMPTAQYGTVVSAANVVLG
                     NLSGTTFTSLASSRGTTPNAVQVTGVNSVPLFMGSWFGKNSVDVTATVIASSSTSQAF
                     NTIVVNDMSDSFSSELSNQRAADLAILNCLKNQTGTTSEFGITLANGHSTAYQALAIA
                     STKYSTLSSKISSLSSSSCGSNCGTGSNIASGMYSAIQQYSGSGFANTKKNIVIITDG
                     VPNTDYAVDYEKADGIYPTATSTKATCIGKNKCSDANLLTMAKNQAAVAAAAGISIST
                     IYYSGDTDPSDQASYAASLATLVTGTGVAMVAPSAAQITSNIGGFCATLPSALKLVL"
     gene            complement(2747..3478)
                     /locus_tag="VHX39_00935"
     CDS             complement(2747..3478)
                     /locus_tag="VHX39_00935"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX3989712.1"
                     /translation="MLPKAILFDLDDTLISAYNHPDRAWVTIAHEFAVELHPIGPDEA
                     AAAINLAADVFWADAERHRVGRLQLLDARAVIIADAFAALTRAGHTPPGDPFARRMAA
                     RYNAFRDEQMHLFDGAHHVVDTFRAKGVQLALITNGAAVPQRAKVERFELTHRFHHIQ
                     IEGEHGFGKPEERAYRHALAALGVEAAETWMVGDNLEWEVVAPQRLGIHAIWHDLVGE
                     GVPEGSLARPDRVIRSLHELLEGIA"
BASE COUNT          771 a         1104 c         1109 g          782 t
ORIGIN      
        1 gctggttggc gcccgatctg gtgaattccg acgatgtcag catcctgaaa cgcgatctgc
       61 gttaagcagt tctaaaggtc cggaaacagc gacggcgcgt gccgcccgtt ggcatgtccg
      121 gaccaacgcg tggtctgtca ccggtcgccg aagcatgacg gcgcaaaccc gaggaccagg
      181 aagatgcctg actcaagaag ccaagagggt accatgtttg gttttcccgc cgaaaccgta
      241 cacacgtggt cgaacgccct gtttatcatg gcgatcgtct tcgcggcggt cctgagcttc
      301 ctcattttcc aatcgtcgtc tctggtgatg gcggacaagc agcgagcgtt ggacgcttac
      361 aagtcggaag ctcaggtcat ggttacggcg gcgcaaaaag acggcgatgc cgccagggct
      421 gcaatcgccc ggtcgagaga gcatggcact gcattggccg tgagggccgc tgggctggag
      481 aaggacgtag cggatgccag ggagcgcata gccgatcttg aaaagcagac cgcctcggct
      541 acggcaacgg ccgaacaggc cgtcaacgaa agaacccagc taaaggccat gctggaacac
      601 gagaaaacct cccgggccga attcgagtca cagttttcct ggcgcgtact cagcgatgaa
      661 caacggagca cgctgatgca acagctttca ggcgcggccc atgccgtggc gatcgagttt
      721 cccgggggcg atcaggaagc ccagttcctc agcctgcaac tgacgaaagt cttccaggac
      781 gcggggtgga aagttgcgct gcgatcaaac ccatcggcac ccttgctctt cggtctcaac
      841 gttccgggtc cggcgaacga tgtggtcaat ctggtgcgcc aggctcttgc cggcatcgac
      901 atgaagccaa gcgaattgga cgctccggcg acgcacaccg gagaagcggc ccggtcgacc
      961 ccggaatgtc ggattatggt gggtgggaaa ctgaccgatg tcgtcaggcg cgtgctcgca
     1021 acgtcgcagg caaggtaacc agcatcgccg gcgggtcgta tcggatcgcg cgagagcggt
     1081 tcggctacaa caccagcttc agagcggacg gcagcgttgc gcagaagccg ccaatgttgg
     1141 aggtgatctg cgcggcggag ggcgccacca tggcgacacc ggtgcctgtc accagggtcg
     1201 ccagagacgc agcgtagctc gcctgatcgc tgggatcggt gtcgccggaa tagtagatcg
     1261 tcgagatcga gatgcccgct gccgccgcaa cggccgcctg atttttcgcc atggtcaaaa
     1321 ggttggcgtc cgagcacttg tttttgccaa tgcaggtcgc cttggtggac gtcgctgtcg
     1381 gataaattcc atcggctttt tcatagtcga cggcgtagtc cgtgttgggc acgccatccg
     1441 tgatgatcac gatgtttttc ttcgtgttgg caaatcccga gccgctgtat tgctggatcg
     1501 cggaatacat accggacgcg atatttgacc cggtgccgca attgctgcca cacgacgacg
     1561 aggacagact ggaaatcttg cttgaaagcg tcgaatattt cgtcgatgcg atggcgagcg
     1621 cctgataggc cgtcgaatga ccgttcgcca gcgtgatgcc aaattccgag gtggttccgg
     1681 tttggttttt caggcaattg agaattgcga ggtcggccgc ccgctggttc gacagttcac
     1741 tgctgaacga gtccgacatg tcgttaacga cgatggtgtt gaacgcctgg ctcgtggaac
     1801 tactggcaat gaccgtggcg gtgacatcga cgctgttttt gccaaaccaa ctgcccatga
     1861 acagggggac actattgacg ccggtgacct gaaccgcgtt gggcgtggtg ccacggctgg
     1921 aggcaaggct ggtgaatgtc gtaccgctca ggttgccgag aacgacgttc gcagcgctca
     1981 caacggtgcc gtactgtgcc gttggcatgt tcgccgtggt gaaggcttgc gccgtggcga
     2041 cgatggtggc cgtcgatcca tttgacgtat aataagtcgt cagcttgttg ccacccgcaa
     2101 gagccgccgc ttcgactgtt tgtttcagca gcaggcttct gtacccgtaa tagcctttat
     2161 caatggacag gcagccgaag ccgatcatgc ctgggattac gccgatggcg atcagggttc
     2221 ccatactgcc gcggtctcgc agacctaacc aggtcggcac ggcaaatctt ctgatccgcc
     2281 tggagatata cgttgatata tcagaatata ttctggtttc taccagacga ttcagaaatg
     2341 tcattaggca attctcggtt cgtgttagca actacacttt atgagtccta tatttcaaat
     2401 tcgtttagtg tgtaattgac tttcgacaac atattctgtt tacaatatga taccgtatcg
     2461 ttctgattcc atgccgcacc acttcatcgc agaaaacgca ttcacactat gccgaatatt
     2521 ctgattacag aaaaattatc tggaaaaacc tgccgatttc gtcagtctct tgaattccga
     2581 gcaggcatcc tgccgccgcc aatgcgcgcg cttccgtcac tctgaatagt gcggccaatg
     2641 cgttctgcgg gcaaattcgc tttacagccg aattttgtta ccaagtgata cgatctgtat
     2701 ccggcctgac tcgcattccg ttaacgatca ggcacacgca ccccgctcag gcaatccctt
     2761 ccaaaagttc atgaagcgac cggatgaccc gatccggccg ggccaacgat ccttcaggca
     2821 cgccctcccc gaccagatcg tgccagattg cgtgaatacc aagtcgttgc ggagcgacaa
     2881 cttcccattc caggttgtcg cccaccatcc aggtctccgc ggcctcaact cccaaggcgg
     2941 cgagcgcatg gcgatacgcg cgttcctcgg gcttgccgaa accgtgttcg ccctcgattt
     3001 gaatatggtg gaagcgatgc gtcagttcga agcgttcgac tttcgcacgt tgcggcaccg
     3061 cggcaccatt ggtgatcaat gccaactgca cgcctttggc gcgaaacgtg tcgacgacgt
     3121 ggtgcgcgcc gtcgaacaaa tgcatctgct cgtcccggaa cgcgttgtaa cgtgcggcca
     3181 tgcggcgggc gaacgggtcg ccgggcggcg tgtggccggc acgcgtcaat gccgcgaagg
     3241 catcggcgat aatgaccgcc cgcgcgtcga gcagctgtag ccggcccacc cgatgccgtt
     3301 cggcatcagc ccagaacacg tccgccgcga ggttgatcgc tgccgctgcc tcatccgggc
     3361 caatcgggtg caactcgacc gcgaattcgt gcgcgatcgt cacccacgcg cggtccggat
     3421 ggttataggc ggagatcaac gtgtcatcga ggtcgaacag gatggctttg ggcagcacaa
     3481 cacaaactcc gttaccgcgc ggccggttgg ctatacgcgt tcccggccgc tcggtcaggc
     3541 ccccacgagc gcccggcctg cccagggtcc ccggctacgc tgaaccggtt cggttacccg
     3601 agcctcggta gtatcggact cagagcaaga ttcatgatgg agtacctcac gcagcacgga
     3661 accgcactcc tgatcgatgt cgcccggctt tgcgcctggc tggccatcct gacgatcatc
     3721 ttcgtgccac tggagcggat gttcgcgctc cacccccggc caatcc
//
LOCUS       DATAVD010000053        12699 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2238443, whole genome shotgun sequence.
ACCESSION   DATAVD010000053 DATAVD010000000
VERSION     DATAVD010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 12699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12699
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2238443"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..963
                     /locus_tag="VHX39_00940"
     CDS             <1..963
                     /locus_tag="VHX39_00940"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CmpA/NrtA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX3989713.1"
                     /translation="IEPSWANIADKLTYGLLDAAVMLPPLVFASALGLRGPAADLVVP
                     MGLSQGGNTIVLGGDIIKESAGLPVGARLGRWLGAQNNRPRIAVVHRFSTHNLMLRYW
                     LALSGVDPDRDIETVVVPPEQVVAALASGQISGFCAGAPWGLTAEMAGVGTALLGTSD
                     IWPFHPEKCLAVRNEWAAANPDALTGLLRTLMQAQAVCDQPAATDEIVAALADEHGLA
                     LPRQATRAALPGGVSPEQIHFHGANAAFPARPHALWFLRQMRRWGWLAADADIGNAAH
                     TIYRPDLFSLAARKEDLFIPDGIEHTVPVPAAIWSDSASESGRF"
     gene            1384..2592
                     /locus_tag="VHX39_00945"
     CDS             1384..2592
                     /locus_tag="VHX39_00945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite transporter"
                     /protein_id="HEX3989714.1"
                     /translation="MHKGFLKAGHLPTLFASFLYFDLSFMVWVLLGPLGVAVSKDLHL
                     SPAEKGLMVATPVLAGALLRVPLGVLVDRFRPKRVGVAAQILVIVGLLAAWLIGIHSF
                     GATLLLGCILGLAGASFAVALPLASAWYPPEHQGTALGIAGAGNSGTVLAALFAPGLA
                     LAVGWQNVIGLAAIPLCLTLCVFTLLAKDSQATRAPKRLADYVRILRVADAWWFMFFY
                     SVTFGGFVGLASSLTIYFNDQYGLTPVTAGYCTAGVVFVGSLVRPLGGAVADRVGGAR
                     TLTVLYAVATAAFATIASGLSTILLAMPVFVLGMLCLGMGNGAVFQLVPQRFRDEIGV
                     MTGVVGMTGGVGGFYLASSLGFSRQYTGGYGLGFLIFALLAAAALVCLTKIRGRWRST
                     WAELYGAARI"
     gene            2595..5024
                     /gene="nirB"
                     /locus_tag="VHX39_00950"
     CDS             2595..5024
                     /gene="nirB"
                     /locus_tag="VHX39_00950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007091380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008942 - nitrite reductase [NAD(P)H]
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0042128 - nitrate assimilation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase large subunit NirB"
                     /protein_id="HEX3989715.1"
                     /translation="MNMIAASRRRLVLVGNGMAGVRALEEILSRAPHAFSITVFGAEP
                     HGNYNRIMLSPVLAGEKTFADIVTHDRAWYQRNGIELIAGEAVTVIDHTNHMVTGANG
                     TMRPYDMLILATGSNPVIIPFPGHDLPGVIAFRDIADVETMLHASRTDTHAVVIGGGL
                     LGLEAANGLLRNGMNTTVLHLMPTLMERQLDPVSAGLLKQDLTKRGLTVLTEANTKAL
                     HGNGRVEAVELTDGRMLKADLVIMAVGIRPNTVLAKSAGLDVGRGVQVDDCMCTSDPA
                     IYAVGECVEHRGAVFGLVAPLFDMATILADRITETAESTYNPAVTGTRLKVTGIDMFS
                     AGDFTGDDTSAAIVFRDASRGVHKHLVVRGDRLIGAVLYGDARDSAWYFDLIRERTDI
                     SAFRDELAFGPGVEQSGVESLPDTAEICGCNGVSKGRILTAIAELKLTSVDEVRARTK
                     ASASCGSCTCNVEKLLALALGSDYDPAPKVKALCKCTSLGHDAVRAAITERKLKSIPA
                     VMRALDWTTPDGCASCRPALNFYLLCAWPGEYVDDARSRFVNERMHANIQKDGTYSVI
                     PRMWGGTTTAAELRAIADVVDKYQIPTVKITGGQRVDMLGVRKEQLPDVWRDLNAAGL
                     VSGHAYGKALRTVKTCVGTEWCRFGTQDSTAMGVALEKMTWGSWTPHKTKMAVSGCPR
                     NCAEATIKDFGVVATESGWDLHVGGNGGITVRATDLLAKVVTESDVLEYCAAFMQLYR
                     EEARYLERTAPWIERVGIAYVRDRLSDAGGRRLLSARFQESQRHTQQDPWAERAAGAE
                     SHEFRSMATVE"
     gene            5030..5365
                     /gene="nirD"
                     /locus_tag="VHX39_00955"
     CDS             5030..5365
                     /gene="nirD"
                     /locus_tag="VHX39_00955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004272973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008942 - nitrite reductase [NAD(P)H]
                     activity [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase small subunit NirD"
                     /protein_id="HEX3989716.1"
                     /translation="MTMISPPGNIGWIRVGTLDDIPRLGCRVVRTRSCDIAVFRTADD
                     RVFAVHDQCPHKQGKLSQGIVHGTSVTCPLHNWVIGLDDGVAKDPDEGCVRTVSARLA
                     GGDIMLALP"
     gene            5362..8025
                     /locus_tag="VHX39_00960"
     CDS             5362..8025
                     /locus_tag="VHX39_00960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase"
                     /protein_id="HEX3989717.1"
                     /translation="MTDIRTTCPYCGVGCGVVAKSDGTIAADPLHPANRGRLCSKGAA
                     LGATLDDTGRLVKPSIGGRHASWDDALGLVAARFKQTIAKYGPDSVAFYVSGQCLTED
                     YYVANKLMKGFIGSANIDTNSRLCMASSVAGHMRAFGEDIVPGIYEDWDTADLVVLVG
                     SNAAWCHPVLHQRLLAAKAAHGTRIVVIDPRRTATADAADLHLPIALGSDIALFNGLL
                     AYLNDAGMIDRLWVRDHTVGLDAAIAAATIPETDMTEWAAEQCGIDPELLETFYDLFA
                     KTERVLTVFSQGVNQSSVGTDKVNAIINVHLATGRIGRPGMGPFSVTGQPNAMGGREV
                     GGLANQLAAHMRFNDPDARAALTEFWQAPALAPHPGLKAVDMFDGVADGRIKAIWIVA
                     TNPASSMPRSDKVRAALAGCPFVVVSDCWPTDTTKFADVVLPAAAWGEKDGTVTNSER
                     LISRQRAFRPAPGEARPDWWQFAEVGRRMGWEAAFASTSAAAVFREHAALSAHANHGR
                     RVFDIGALANLDDEAYGALQPVHWPLPIGTAGEGGRLFGQGGFPTPDGRARAVAVAWS
                     GRPDAAGRGLLLNTGRVRDQWHTMTRTGLAPNLMTHTPEPLLTMHPADAAEAGIENAA
                     LVRIRTDEGAVLLRAEVNHTQRRGEIYAPMHWADQFVSSGPVARVVTARCDPVSGQPE
                     MKATPATVEPVQVYFHGTLVRRLGGQPDDLAPEDCHWVRVPLAEGHLYRLTGLCPMAE
                     GEALTQFAATLLAAPDAAEWIEVSDPGCGVLRVAALLDGAVEAALFLARNPSSLPVEA
                     AVIPILGAPVSDRARGRLLAGKLYDKVAAEGPRVCACFGVTRDAIRHAVVTHRLRSSA
                     EIGVVLGAGTNCGSCIPELEEILRSVRMPAS"
     gene            8053..8436
                     /locus_tag="VHX39_00965"
     CDS             8053..8436
                     /locus_tag="VHX39_00965"
                     /inference="COORDINATES: protein motif:HMM:NF019149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEX3989718.1"
                     /translation="MPFLVAELGANADPFMLHIYAVLAEKKRALISDWTRMALARKKA
                     QGVVLGDRTNLADASAKGADANRVAADTFAANVLPVVRQIAASGVKGSRAIAAALNTR
                     GVRTARGGEWHATTVRNLMGRDAVG"
     gene            8604..8927
                     /locus_tag="VHX39_00970"
     CDS             8604..8927
                     /locus_tag="VHX39_00970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989719.1"
                     /translation="MEQESQIPKLISDAGFVAGSALAPAGQWARAVREGWTAADGKPT
                     MNHSGGLSAKFQPIDTTGVSMHVISGLQLTGTTGAMQLPRADIGGMFNMGVASYVSIL
                     EPMRG"
     gene            8937..10421
                     /locus_tag="VHX39_00975"
     CDS             8937..10421
                     /locus_tag="VHX39_00975"
                     /inference="COORDINATES: protein motif:HMM:NF025622.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosyltransferase domain-containing protein"
                     /protein_id="HEX3989720.1"
                     /translation="MPARLFAGERLTPSAIGLAWVLVLLAYLYQGIVPAFNADDIMQM
                     QNPQDALEIIKEGRWGYYFIFGVLMHTDPLPLLSTVLGTVCLVGSAVLAARLLAFRFA
                     AAALVFILVASISIYYGDLFSYDSTRLAFPFGNLLAIAGLYGFFRGQRAVGIVLLALA
                     PGFYPVASELAAAVLVAVAIRRLAWPQGDTSAVLSAAAALLASLVLYMLVTHVAYAAL
                     GLELNGRTRLDPLAAIHRFHEVLDLFRTHSMPLLARAGGRYLPWPIVLCASCLFVAAA
                     ALTILQAYRRRGAAAAALAAGLNAALLVTPYALIFASGGDDTPFSPRALYAFSTIHAV
                     WGATLFDAALPGVPVSRRARITAVLVVAAAGLIVIGSAARITEAAFDEYLASQSDLLA
                     TNRIISRIDTMLAQTPNPSPAEIPIAVVAARPFLAGPRGTVATSRQLPWSREWIFHLV
                     DRRFRWVTGDAYLAAQQAAQSHGDWPAADSVFWRDGVVVVVINK"
     gene            10521..11234
                     /locus_tag="VHX39_00980"
     CDS             10521..11234
                     /locus_tag="VHX39_00980"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3989721.1"
                     /translation="MTQKAEFDAHADGYDAGMDNKLKALTGGSADDFVAVKVHWLLRR
                     WPELRSNAAWSILDYGCGAATLLRLLRAAGIPGRLTGTDVSSGMLREAARIWPADQPP
                     PGLQIQNGAATGLPSDSFDLALISAVLHHVPVPGRNEVYAELQRVLRPDGRLVVFEHN
                     PWNPITSYVVAHTPIDRGAILLPPPEVTASLTAGGWRDIRTSHLMFLPPRLGLVATAA
                     ERMFGWLPIGGQYAVTACK"
     gene            11425..12453
                     /locus_tag="VHX39_00985"
     CDS             11425..12453
                     /locus_tag="VHX39_00985"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3989722.1"
                     /translation="MFLSVVAPCFNEADNLREFHRRVAAVCEGLGAWELILVNDGSTD
                     TTFDVIRNLVQRDLHVTGVNLARNYGHQIALTAGLQFCTGEHILILDADLQDPPELLD
                     EMLRLMDQQNADVVYGQRRARAGETWFKTRTAALFYRLMRRLVDIDLPMDAGDFRLMT
                     RRTVAVLNNMPEQHRFIRGMVAWIGLRQVPLLYDREPRRAGETHYPLHRMIRLAFDAI
                     TGFSVMPLRLASLAGAGVGVIGLLLLTYTLVGWLTGQALQGWTSMTSLMLILGGAQLM
                     LLGIFGEYLGRLYIEVKRRPLFVVDRVLTNAATNTKRVTPDMASILSRTHGRANEQET
                     NHEIRDLL"
BASE COUNT         2142 a         3952 c         4139 g         2466 t
ORIGIN      
        1 attgaaccat cctgggccaa catcgcagac aagctgacct atgggctgtt ggacgcggcg
       61 gtgatgctgc cacctttggt tttcgcttct gcgctgggac tacgcggacc agcagccgac
      121 ctggtcgtgc cgatgggact gtcgcaaggc gggaacacga tcgtgctcgg cggcgatatc
      181 atcaaggagt ccgcaggcct ccccgtcgga gcgcgtttgg gccgctggct cggagcgcag
      241 aacaaccgcc cgcgcatcgc ggtcgtgcac cggttttcca cgcacaacct catgctacgc
      301 tattggctgg cgttgagcgg tgtcgacccg gaccgcgaca tcgaaacggt cgtggtaccg
      361 ccggagcagg tggtggctgc actggccagc ggccaaattt ccggattctg cgctggcgcg
      421 ccctggggcc tgacggccga aatggccggg gtcggaactg cgcttttagg cacctccgac
      481 atatggccat tccacccgga aaaatgcctg gcggtgcgaa acgaatgggc tgcagccaat
      541 ccggacgcgt tgaccgggct gctgcgcact ctcatgcagg cgcaggcggt atgcgatcag
      601 cccgcggcga cggatgaaat cgtggccgcg ttggcagacg agcatgggct ggcattgccg
      661 agacaggcca cgcgggcggc actcccgggt ggcgtgagcc ccgagcaaat tcacttccac
      721 ggtgccaacg ccgcatttcc agcgcgaccg catgcacttt ggtttcttcg gcagatgcgt
      781 cgatggggct ggttggcggc agacgctgac atcggcaacg cggcgcacac gatctatcgg
      841 ccggatttgt tttctttggc ggcgcggaag gaagatttgt tcattcccga tgggatcgag
      901 cataccgtcc ccgttccggc ggccatttgg tcggattccg catcggaatc gggccggttt
      961 tagccacctc gtcatggccc gtggcttccg cgcgacgggc tggcagcagc ggaccgtttt
     1021 cctctgccgt cgttttggtc agagtgctgg gagacaacct tggaacctga ctgcgttggc
     1081 gcggcgtgcg ttcggatgat tccaacatat gatgatttaa taatcgtaag gggataatat
     1141 aggctatata tgagtaacat atgatcacat cggttttgcc gcgtagctca ttttcgggtc
     1201 atttcgccgc gccgaattct ggcacccttc ttgccctgta gatccccggt gatgcccatt
     1261 tgaaccttgg gcgccaacgg tgccgcctca acggcgagcg ggaccggacc ctggagcggc
     1321 aatcccgctc tcacggccag accggaggat caacgacgat cctcccgatc agtgtgacca
     1381 atcatgcaca aaggtttcct caaggccggc catttgccga ccctgttcgc gtcattcttg
     1441 tacttcgacc tcagtttcat ggtgtgggtt ttgctcggcc cgctcggcgt cgccgtcagc
     1501 aaggatctcc acctttcccc tgcggaaaag ggattgatgg tcgccacgcc cgtgctggcg
     1561 ggcgcgttgc tgcgagtccc tcttggcgtg ctggtcgacc gcttccgacc gaagcgggtt
     1621 ggcgtcgccg cacagatcct cgtcatcgtc ggcctgctcg cggcatggct gatcgggatc
     1681 cacagcttcg gcgcaacact gcttctcggc tgtatactcg gtctcgccgg agcttcgttc
     1741 gccgtcgccc tgccgctcgc ctcggcctgg tatccgcctg agcatcaagg caccgctctg
     1801 ggcatcgccg gagccggtaa ctcgggtacc gtgctggcgg cactgttcgc accgggtctc
     1861 gcgctggcag ttggctggca gaacgtgatc gggttggcgg caattccgct gtgcctcacg
     1921 ctgtgcgtgt tcactttgct ggcgaaggac agccaggcca cgcgggcgcc gaaacgactc
     1981 gctgactatg tcaggattct tcgggtcgcc gatgcctggt ggttcatgtt cttctacagc
     2041 gtgaccttcg gcggcttcgt cgggctggcc tcctcgctga ccatctactt caacgatcaa
     2101 tacggattga caccggtcac cgccggttac tgcaccgccg gcgtggtatt cgtcggttcg
     2161 ctggtgcgtc cattgggcgg agcggttgcc gaccgggtcg gcggcgcgcg cacgctgaca
     2221 gtgctgtatg ctgtcgccac ggcggccttc gccaccatcg ccagcggcct gtcgacgatt
     2281 ctgctcgcga tgccggtgtt cgtattgggc atgctgtgcc tcggcatggg caacggcgcg
     2341 gtgttccaac tggtgccgca gcggttccgt gacgaaatcg gcgtgatgac cggcgtggtc
     2401 ggcatgaccg gcggcgtggg cgggttctac ctcgcctcca gcctgggttt ctcgcggcag
     2461 tacaccggag gctatgggct cgggtttctg atcttcgcat tgcttgccgc cgccgccctg
     2521 gtctgcctga ccaaaatccg cggccgctgg cgctccacct gggccgaact ctacggcgcg
     2581 gcgaggatct gatcatgaac atgatcgcag cctcccgtcg ccggctggtg ctggtcggca
     2641 acggaatggc cggagtgcgc gcgctggaag agattctttc ccgtgccccg cacgcatttt
     2701 ccatcaccgt gttcggcgcc gaaccgcacg gcaactacaa ccgcatcatg ttgtcgccgg
     2761 tgctggccgg tgagaaaacg ttcgccgata tcgtgaccca cgaccgcgcc tggtaccagc
     2821 gaaacggcat cgaactgatc gccggagagg cggtgacggt aatcgatcac accaaccaca
     2881 tggtcaccgg tgccaacggc acgatgcggc cctatgacat gctgatcctg gccaccggat
     2941 cgaacccggt gatcattccg ttcccgggac atgacctgcc aggtgtcatc gcgttccgcg
     3001 acatcgccga cgtcgaaacg atgctgcacg cgagccgcac cgacacacac gccgtcgtta
     3061 tcggcggcgg ccttctcggc ctggaggcgg ctaacggcct gctgcgcaat ggtatgaaca
     3121 ccacggtgct gcatctgatg ccgacgctga tggagcgtca gctcgatccc gtctccgccg
     3181 gattgctgaa gcaggacctg acgaaacgcg gcctgacggt gctgaccgag gcgaacacga
     3241 aagcgttgca cggcaacggt cgtgtcgagg cagtggaact gaccgatggg cgcatgctga
     3301 aggccgatct ggtcatcatg gcagtcggca ttcggcccaa cacggtgttg gcgaaatccg
     3361 ccggtctgga tgtgggccgc ggcgttcagg tcgacgactg catgtgcacg tcggatcccg
     3421 cgatctacgc agtcggcgaa tgcgtggaac atcgcggcgc ggtattcggc ctcgtggcgc
     3481 cgctgtttga catggcgacg attctcgccg accggatcac cgaaaccgcc gagagcacgt
     3541 ataatcccgc cgtcaccggt acgcgcctga aggtcaccgg gatcgacatg ttctcggccg
     3601 gcgatttcac cggcgacgat accagtgcgg cgatcgtgtt tcgggacgcc tcgcgcggtg
     3661 tgcacaaaca tctggtcgtg cgcggcgacc ggctgatcgg cgcggtattg tatggcgacg
     3721 cgcgcgacag cgcctggtat ttcgatttaa tccgcgagcg caccgacatt tccgccttcc
     3781 gcgacgagct ggcattcggt cccggcgtcg agcaatccgg cgtcgaaagc ctgcccgata
     3841 cggcggagat atgcggctgc aacggcgtct ccaagggtcg catcctgacc gcgattgctg
     3901 agctcaaact taccagcgtc gacgaggtgc gggcgcgcac caaggcctca gcatcgtgcg
     3961 gtagttgcac gtgcaacgtg gaaaaactgt tggcgttggc tttggggtcc gactacgatc
     4021 cggcgccaaa ggtcaaggcg ctgtgcaagt gcacctcgct cggtcacgac gcggtgcgcg
     4081 ccgcgatcac cgagcggaaa ttgaagtcaa ttcccgcggt gatgcgggca ttggactgga
     4141 ccacgccaga tggttgcgcg agttgccggc ccgcgttgaa tttttatctg ctgtgcgcct
     4201 ggccaggcga gtacgtcgat gatgcccgct cgcgtttcgt caatgagcgg atgcatgcca
     4261 acattcaaaa ggacggcact tactcggtca ttccacgcat gtggggcggc acgacgacag
     4321 ccgccgagct gcgcgcgatc gccgacgtgg tcgacaagta ccaaattccc acggtcaaga
     4381 tcaccggcgg ccagcgcgtc gacatgttgg gtgtgcgaaa ggagcaattg ccggatgtct
     4441 ggcgcgatct gaacgcggcg ggcctcgtgt cggggcacgc ttacggcaag gcgctgcgca
     4501 cggtgaaaac ctgtgtcgga acggaatggt gccgcttcgg cacacaggat tccactgcga
     4561 tgggcgttgc gctggagaaa atgacctggg gctcgtggac gccgcacaaa accaagatgg
     4621 cggtctccgg ttgcccgcgc aattgcgccg aggcgacgat caaggatttt ggcgtcgtcg
     4681 cgaccgagag cggctgggac ctgcatgtcg gcggcaacgg cggcatcacg gttcgcgcca
     4741 ccgacctgct ggccaaggtc gtcacggaat ccgacgtgct ggaatattgc gccgccttca
     4801 tgcagctcta tcgtgaggag gcgcgctatc tggaacgcac cgcgccgtgg atcgagcggg
     4861 tcggtatcgc ctacgtccgc gaccggctca gcgatgccgg aggacgccgc ctgctgagcg
     4921 cccggtttca ggagtcccaa cgtcacacac aacaggatcc atgggcagaa cgcgccgcgg
     4981 gcgctgaaag tcacgaattc cgctccatgg cgacggtcga gtgatgggca tgacgatgat
     5041 ctcgcccccc ggaaacatcg gctggatccg ggtcggaacg ttggacgaca tcccccgcct
     5101 tggttgccgt gtggtgcgaa cgcgttcctg cgatatcgcg gtgttccgca ccgccgatga
     5161 tcgcgtgttc gccgtgcacg accaatgtcc gcacaaacag ggcaagctgt cgcagggcat
     5221 cgtgcatggc acgtcggtca cctgtccgtt gcacaactgg gtgatcgggc tggatgacgg
     5281 cgttgccaaa gatcccgatg agggctgcgt ccgtaccgtg tcggcgcgac ttgccggcgg
     5341 cgacatcatg ctggcgttgc catgaccgac atccgcacca cctgtccgta ttgcggcgtc
     5401 ggctgcggcg ttgttgccaa atcggacggc acgatcgccg ccgatccatt gcatcctgcg
     5461 aaccgcggcc gcctttgttc caaaggagcg gcactgggcg ccacactcga cgacaccgga
     5521 cgactggtga agccatcgat cggcggacgg catgcgtcat gggacgatgc tctggggctg
     5581 gtcgccgcgc ggttcaaaca aacgatcgcc aaatacggtc ccgacagcgt cgccttctac
     5641 gtttccggcc agtgtctgac cgaggattac tacgtcgcca acaagttgat gaaaggcttt
     5701 atcggcagcg cgaacatcga caccaattcg cggctgtgca tggcgtcctc ggttgccggc
     5761 catatgcgtg cgtttggcga ggatatcgtc cccggaatct acgaagactg ggacaccgcc
     5821 gatctcgtcg ttctggtggg tagcaacgcc gcctggtgcc acccggtgct gcatcaacgg
     5881 ttgttggcgg ccaaagcggc gcacggcacc aggattgtcg tcatcgatcc gcgccgcacc
     5941 gcgaccgccg atgctgccga tctgcatttg ccgattgccc tgggcagcga tatcgcgctg
     6001 ttcaacggtc tgctggcgta tctgaatgat gccggaatga tcgaccggct ctgggtgcgc
     6061 gatcataccg tcggtctgga cgcagcgatc gccgccgcca cgatcccgga aaccgatatg
     6121 accgagtggg ccgccgaaca atgcggcatc gatccggaac tgctcgaaac gttctatgac
     6181 ctgttcgcga aaaccgagcg tgtgctgacg gtgttttccc agggggtcaa tcagtcctcg
     6241 gttggaaccg acaaagttaa cgcgatcatc aacgttcatc tcgccaccgg acggatcggg
     6301 cgacccggca tgggaccgtt ctccgtcacc ggccagccga acgccatggg cggacgggag
     6361 gtcggcggcc tggccaatca actcgccgcg catatgcgct ttaacgatcc ggatgcgcga
     6421 gcagcgctga cggaattctg gcaggcgccc gcgctggcgc cgcacccagg cctaaaggcc
     6481 gtcgacatgt tcgacggcgt tgcggatgga cgcatcaagg cgatctggat cgttgccacc
     6541 aatccggcat cgagcatgcc gcgttccgac aaggtccggg ccgcactggc cggctgtccg
     6601 ttcgtcgtgg tttccgattg ctggccaacc gacaccacga agtttgcgga tgtcgtgctg
     6661 cccgctgccg cctggggcga gaaagacggc acggtaacca actcggaacg gctgatttcc
     6721 cgccagcgtg cgttccggcc cgccccaggc gaggcccgcc ccgactggtg gcaattcgct
     6781 gaagtcggcc gccgcatggg ctgggaggca gcgtttgcct cgacctccgc cgccgccgtg
     6841 tttcgcgagc acgccgcgct gtcggcccat gcgaaccatg ggcggcgcgt gttcgacatc
     6901 ggtgcgctcg cgaaccttga cgacgaggca tacggcgcac tccagccggt ccattggccg
     6961 ctgcccatcg gaactgcggg cgagggcggg cgattattcg gtcagggcgg ttttcctacg
     7021 ccggatggac gagctcgcgc cgtggcggtg gcctggagcg ggcggccgga cgcggctggt
     7081 cgcgggttgc tgttgaacac cggccgggtg cgtgaccagt ggcacacaat gacccgaacc
     7141 ggtctggcac cgaacctgat gactcacacg ccggagccgt tgctgaccat gcacccggcc
     7201 gacgcggcgg aggccgggat cgaaaatgct gcattggttc ggattcgcac cgacgagggt
     7261 gccgttctgt tgcgcgctga ggtgaaccac acccagcgcc gcggcgagat ctacgctccg
     7321 atgcattggg ccgaccagtt tgtttcgagc ggcccagtgg ctcgcgtggt aactgcgcga
     7381 tgcgatccgg tctccggcca gccggagatg aaggcgacgc cggctaccgt ggaaccggtc
     7441 caggtgtact ttcacggcac cctcgtccgt cgtttgggcg gccagcctga tgacctggcg
     7501 cccgaggatt gtcactgggt tcgcgtccca ctggccgaag gccacttgta tcgcctcacc
     7561 ggtctgtgtc cgatggcgga aggggaagca ctgacgcagt tcgccgccac actactcgcg
     7621 gcgcccgatg ctgccgaatg gatcgaggtc tccgatcccg ggtgcggtgt gctgcgcgtc
     7681 gccgccttgc tggacggagc ggtggaagcg gctctgttcc tcgcgcgcaa cccgtcttca
     7741 cttcccgtcg aggccgccgt gatcccaatc ctgggcgcgc ccgtttcgga ccgcgcgcga
     7801 ggcaggctgc ttgccggcaa gctgtacgat aaggtggccg ccgaagggcc acgcgtttgc
     7861 gcctgtttcg gcgtcacccg cgatgcgatc cgccatgcgg ttgtgaccca ccgtctgcgg
     7921 agcagcgcag aaattggcgt cgtgctcggg gccggcacga attgcggctc ctgcatcccc
     7981 gaactcgagg agattctgcg aagtgtccgc atgcccgcat cgtaagggga aacgcggctc
     8041 tggtgagagc gcgtgccgtt tctcgtggcg gaactgggtg cgaacgcgga cccgttcatg
     8101 ctgcacattt acgctgttct ggccgagaaa aagcgggcgc tgatttccga ctggacccgc
     8161 atggcactgg cgcggaagaa agctcagggg gtagtcctgg gtgaccggac caatctcgcc
     8221 gacgccagcg ccaagggcgc ggacgcgaac cgggtggcgg cggacacgtt cgcggcgaac
     8281 gtgctgccgg tggtgcggca gatcgcggca agcggtgtga agggaagccg ggccatcgcg
     8341 gcagcgctga acaccagggg cgtgcggacg gctcggggtg gggagtggca cgcgaccacg
     8401 gtgaggaatt tgatgggccg cgatgcggtg gggtgacgct ggccgaaaca tgtagatatc
     8461 tggcttttct gatcctccgg cagtcagctg ataggcgccg gcagctcaat cgcttgcagc
     8521 gggatgaccc tgcgcgaggc cgcgattgac gtcgttcgcc atatcagcac cattctctcg
     8581 gcagtgtcag ggggaagaaa acaatggagc aagaaagcca aattccgaag ctcatcagtg
     8641 atgccggctt cgtcgcgggc agtgcactcg caccggccgg gcagtgggcc cgggcggtgc
     8701 gggagggctg gacggcggcg gacggcaagc cgaccatgaa ccactcgggc ggcttgtcgg
     8761 cgaaattcca accgatcgac accaccggcg tctcgatgca tgtcatcagc gggttgcaac
     8821 tcacgggcac cacgggtgcg atgcagttgc cgcgcgctga tatcggcggc atgttcaaca
     8881 tgggcgtcgc cagctatgtc tcgatcctcg aacccatgcg cggctgagac gtgccggtgc
     8941 cggccaggct gttcgcaggg gagcggctga cgccgtcagc gattgggctg gcctgggtgc
     9001 tggtgctgct ggcgtatctg tatcaaggca tcgtccccgc gttcaacgcg gatgacatca
     9061 tgcagatgca gaacccgcag gacgcgctgg aaatcatcaa ggaaggccgc tggggatatt
     9121 attttatctt tggcgtactg atgcacaccg atccgctgcc gttgctgtcg acggtgttgg
     9181 gcactgtctg tctcgttggc tcggcggtgc tggcggcccg gctgctggcg ttccggttcg
     9241 ccgcggcggc gctggtgttt attctggttg cctcgatatc catctattac ggcgatctgt
     9301 tcagctacga cagcacaagg ctggcgtttc cgttcggcaa tctgctggcg attgccgggt
     9361 tgtacggctt tttccggggg cagcgcgcgg tgggcatcgt gctgctggcg ctggccccgg
     9421 ggttctatcc ggttgcctcg gaactcgccg ccgcggtttt ggtggcggtc gccatccgcc
     9481 gccttgcgtg gccgcagggc gacacaagcg cggtactgtc cgcggcggcg gcactgcttg
     9541 cctcgctggt gctctacatg ctggtcacgc acgtggccta cgcggcgctc ggtctcgaac
     9601 tcaacggccg cacgaggctc gacccgctcg ctgcgatcca tcggttccac gaggtactcg
     9661 acctgttccg cacccattcg atgccgctgc tggcgagggc cggcgggcgc tatctgccgt
     9721 ggccgatcgt gctgtgcgca agctgcctct tcgttgcggc cgcggcattg acgatcttgc
     9781 aagcataccg gcgccgtggc gccgccgccg ccgccctcgc cgccgggctc aacgcggcgc
     9841 tgctggtcac gccttacgcg ctgatcttcg ccagcggcgg cgacgacacg ccgttctcac
     9901 cgcgcgcgct gtacgccttt tcgacgatcc atgccgtgtg gggtgccacg ctgttcgatg
     9961 ccgcattgcc gggcgtgccg gtgtcccgcc gcgcccggat cacggccgtt ctcgtcgtgg
    10021 cggcggccgg cctgatcgta atcggcagcg ccgcccgaat caccgaagcc gcattcgacg
    10081 aatatctggc gagccaaagc gacctgctgg caaccaatcg catcatctcg cgcatcgaca
    10141 cgatgctggc gcaaaccccg aacccgtcgc cggcggagat cccgatcgcc gtggtcgccg
    10201 caagaccgtt cctcgcggga ccacgcggca ccgtggccac atcgcgccaa ttgccgtggt
    10261 cgcgcgaatg gatcttccat ctggtcgatc ggcggttccg ctgggtgaca ggcgatgcct
    10321 atctcgcggc gcaacaggcc gctcaatcgc atggcgactg gcccgccgcc gactcggtgt
    10381 tctggcgcga cggcgtggtg gtcgtcgtca tcaacaaata gcggcgccgc tggtgctcta
    10441 agccaaacgt agggttcaca gctggcctgg tgtgcccgtc aagttgtatc cttatccgac
    10501 ccgtgacact tggtacgtcg atgacccaaa aagctgaatt cgacgcccat gccgatggct
    10561 acgacgccgg catggacaac aagttgaagg cactgaccgg cggtagcgcc gacgattttg
    10621 ttgccgtcaa agtgcattgg ctgctgcggc gttggccgga gctgcgatcg aatgctgcct
    10681 ggtcgatcct ggattatggc tgcggcgcgg cgaccttgct gcggctgctg cgagccgccg
    10741 gaatacctgg tcgtctgacc ggaaccgatg tctcctctgg catgttgcga gaagccgcgc
    10801 gaatctggcc ggctgaccag ccgccacccg gattgcaaat acaaaacggt gcagcgaccg
    10861 gattgccgtc agattcgttc gatttggcct tgatcagcgc agttctgcac cacgtcccgg
    10921 tgcccgggcg caacgaggtt tacgccgaat tgcaacgggt tttgcgaccg gatggaaggc
    10981 tggtggtgtt tgagcataat ccgtggaacc cgatcaccag ctatgtcgtt gctcacacgc
    11041 caatcgatcg gggggcaatt ctgttgccac ctcccgaggt caccgcatca ctgaccgcag
    11101 gtggatggcg cgacattcgc acaagtcatc tgatgttcct gccgcccaga ctgggattgg
    11161 tggcgacggc ggctgaacga atgtttgggt ggttgccgat cggcggacaa tacgcggtca
    11221 cagcgtgcaa gtgacgctct ccgcacctgg cgtaactgac tcttcagatg aacgtcgaaa
    11281 cgcgcgaccg gtctgagaag tcggtcgaac agggtcgcct tccggttcgg ctgcgccggc
    11341 gcgatcatct gtgttaggtt ctctcgcgtt gtctgccacc accggccgac ccggatattc
    11401 tcggcgcaag cggagtaaca cggcatgttc ctgtccgtcg tcgcaccatg cttcaatgag
    11461 gctgacaact tgcgcgagtt tcaccggcga gtcgccgcgg tctgcgaggg tctcggcgca
    11521 tgggaactca ttctggtcaa cgatggctcg accgatacga cgttcgatgt gatccggaat
    11581 cttgtgcagc gtgatctgca tgtcaccggc gtcaacctcg cccgcaacta tggccaccag
    11641 atcgccttga ccgccggcct gcaattctgc acgggcgaac atatcctcat cctcgacgct
    11701 gacctgcagg acccaccgga gttgctggat gaaatgctgc gcctgatgga tcagcaaaat
    11761 gccgacgtcg tctacggcca acgtcgggcg cgagccggag agacctggtt caagacccgc
    11821 accgctgctt tgttctaccg attgatgcgg cgcctcgtgg atatcgatct gccgatggat
    11881 gctggtgatt tccgcctgat gacccggcgc accgtggcag tgctgaacaa catgccggag
    11941 cagcatcgtt tcattcgcgg catggtggcg tggatcggcc tgcgccaggt accgctgctg
    12001 tacgaccgcg agcctcgccg cgcaggagag acgcactatc cgctgcaccg gatgatccgc
    12061 ctcgcgttcg atgccatcac aggattttcg gttatgccgc tgcggctcgc gtcgctggcc
    12121 ggagcaggag ttggcgtgat cgggttgcta ttgttaactt acacgctggt gggctggctc
    12181 actgggcagg cgctccaggg ctggaccagc atgaccagcc tgatgctcat tctgggtggc
    12241 gcgcagctta tgcttttggg catctttggc gagtatctcg gccggctcta tattgaagtc
    12301 aaacggcggc cgctgttcgt cgtcgaccgt gtgctgacca atgctgccac aaacacaaag
    12361 cgcgtcactc ctgatatggc ctcgatcctg tcgcgcactc atgggcgagc aaacgaacag
    12421 gaaaccaacc acgaaattcg ggatcttctg tgaactgcaa ctggtgccct ccgggcgtgc
    12481 acggcggtgg cgatgcggct tgagttggga tcggcaggta aaatttccgt tccggggcag
    12541 ctggatactt cccgccagag catttcaatc ctgactggaa tcgcgacctg cgaatccctg
    12601 ttgatccatg attcttgcgt tcccgaatgg cctgattcgg gagacggcga tgttgtggca
    12661 gcgaggcaag gcgtacgggc aggatctgac ggagcgctt
//
LOCUS       DATAVD010000054         3986 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_4842, whole genome shotgun sequence.
ACCESSION   DATAVD010000054 DATAVD010000000
VERSION     DATAVD010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3986
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4842"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..937
                     /locus_tag="VHX39_00990"
     CDS             <1..937
                     /locus_tag="VHX39_00990"
                     /inference="COORDINATES: protein motif:HMM:NF015739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HEX3989723.1"
                     /translation="SRYQFPAAVRLDGGTCGLPGGHLIMAGRRASVTDRPPTWKLFLR
                     RQRWMVRPFAWICVGLAATAGGMVLLRNAQPGSSIASVREKVGVLTANAGMRITDIII
                     EGRANTPEPVLRAALGFSKGDPIIGFSLEQARMRIEKLPWVAHATVERRLPGTIVIAL
                     TERRPFAIWQNQGRYVLIDRDGQPVTDEQVAKFRELPLIVGPGAPQAAGVLLDALTDR
                     PAIQSRVIAAMRISERRWNLRMKNGTDILLPEGHEVEALDRLLQLQQETALLDRPLEA
                     IDMRLGDRLVLRPQAGAGTNSPEKPASPPVPKKPT"
     gene            951..2261
                     /gene="ftsA"
                     /locus_tag="VHX39_00995"
     CDS             951..2261
                     /gene="ftsA"
                     /locus_tag="VHX39_00995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEX3989724.1"
                     /translation="MNDNPHRVLTHDTGPPEPDRSRPHRSGTFGVLDIGTTKIACLIA
                     RVDSDGDLRVLGCDWRQGLGVRGGSIVDLEKAERAIRACVGQAENMADTRLRDVIVNL
                     TCGQPDSRIYNVKWSLDAPAEGRPVTDHDVRGVLREGRHLSYSEGREPVHVIPLTFAL
                     DDTDHVVDPRGLYCSTLDARLHVIDVSASSLRSLEACLRNCDLEIEAIVSAPMAAGMS
                     TLVDDEREIGTTVIDMGGGTTNVASFFENQLIHTAQIRIGGLHVTSDLAKGLSTPLAH
                     AERLKTLWGNVQASPDDERDMLPVPRVGEADHHLAKVPRSMVVNIIRPRIEETLESVR
                     DKLAESGLSNATGNRIVLTGGACQLPGLQHLASRILGHDVRVGRPQSIRGMPEIFTGP
                     AFATVTGLLNWAANEGGTFHQIDPRRGGRPSWFHRLVNFIRDRV"
     gene            2329..3912
                     /gene="ftsZ"
                     /locus_tag="VHX39_01000"
     CDS             2329..3912
                     /gene="ftsZ"
                     /locus_tag="VHX39_01000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEX3989725.1"
                     /translation="MTLNLNTPQQMHTDFTPRITVIGVGGGGTNAVDNMIAANLRGVD
                     FVVANTDAQQLMHSKADRRVQLGPHLTQGLGAGAKPDVGRAAAEEASDELYRHLDGTH
                     MVFITAGMGGGTGTGAAPVIARMAKERGILTVGVVTKPFGFEGARRARAADDGIHELQ
                     QYVDTLIVIPNQNLFHMANERTTWKEAFKMADQVLYMGVRGVTDLMMVHGQINLDFND
                     IKTVMAEMGKAMMGTGEAEGEDRAKRAAEAAVNNPLLEETSMNGARGLLINITGGDDL
                     TLFEVDQAVSTVREQVDDEANVLFGSATDPSLEGRIRVSVVATGIDHPQSQEEARPKL
                     VAVGGGGVGYADPQPVPLPVGGVPVTGGTAAPQMQATDPRAPQNSNVTALRHQTVQQE
                     RVIIRDPMPYPDDPMDPRRSAQGNAQPARQPSGLFAHAPGSVPVETAPVQGTGESMTR
                     SLFQHATGLFRKRPMSASTPEVVVRRREPLTTESVHVLQATELVMEPEQRPIERRTMA
                     LDESGLDIPAFLRRQSSSA"
BASE COUNT          764 a         1193 c         1295 g          734 t
ORIGIN      
        1 atctcggtat caatttcccg cggctgtgcg cctggatggt ggaacatgcg gcctgccggg
       61 agggcacctg atcatggcag gccgccgagc ctccgtcacc gatcgaccgc cgacctggaa
      121 gctgttcttg cgccggcagc gctggatggt gcgtccgttc gcgtggattt gcgtcggact
      181 cgcggccacc gccggcggca tggtgttgtt acgcaacgcc cagccaggca gcagcattgc
      241 ctcggtgcgg gagaaggtcg gcgtgctgac cgccaatgct ggcatgcgta tcaccgacat
      301 catcatcgaa ggccgcgcca acacacccga accggtcctg cgtgcggctc tgggttttag
      361 taagggcgat ccgatcatcg gtttctcgct cgagcaggcg cggatgcgca tcgaaaagct
      421 gccctgggtg gcacatgcaa cggtggaacg ccgcctgcct ggcacgatcg tcattgcact
      481 aaccgagcgc cggccgttcg ccatctggca aaaccagggc cgctacgtgc tgatcgatcg
      541 tgacggccaa cccgtcaccg atgaacaggt cgccaaattc cgcgaactgc cgctgatcgt
      601 cgggcccggt gcgccgcagg ccgcgggcgt gttgctggac gcgctgaccg accgtccggc
      661 gatccagtcc cgggtcattg cggcgatgcg gatcagcgaa cgccgctgga atctgcgcat
      721 gaaaaacggc accgatattt tgttgccgga gggtcatgaa gtcgaggcgc tcgatcgcct
      781 tctgcaactg caacaggaaa ccgcgctgct cgatcgtcca ttggaggcaa tcgacatgcg
      841 attgggcgac cggctcgttc tgcgacccca ggcgggtgcc gggaccaatt cgcccgaaaa
      901 gcctgcctct ccgccagtgc cgaagaagcc aacttaggag cgcgcgaccg atgaacgaca
      961 atccgcaccg cgtgctgacc cacgataccg gaccgccgga acccgatcgc tcgcggccgc
     1021 atcggtccgg cacgttcggc gtgcttgata ttggcacgac caagatcgcc tgcctgatcg
     1081 cccgggtcga cagcgacggc gatttgcgtg tgctcggttg cgactggcgg caaggtctgg
     1141 gcgtgcgcgg cggcagtatc gtcgatctgg agaaggccga gcgggcgatc cgcgcctgcg
     1201 tcggtcaggc cgagaacatg gccgatacca ggctgcgcga cgtcatcgtc aacctgacct
     1261 gcggtcaacc ggattcacgg atttacaacg tcaagtggtc actcgatgcg ccggcggaag
     1321 gacgtccggt gaccgatcac gacgtcagag gcgtgttgcg tgagggccgc cacctttcgt
     1381 actccgaagg tcgcgaacca gtgcacgtga tcccgctgac atttgcgctg gacgataccg
     1441 atcatgtggt cgatccgcgt ggcttgtatt gttccacgct ggacgcgcgg ctgcacgtga
     1501 tcgacgtttc agcgtcgtca ttgcgctcgc tggaagcttg tctgcgcaac tgcgatcttg
     1561 aaatcgaggc aatcgtttcg gcgccgatgg cggccggaat gtcgacattg gtggatgacg
     1621 agcgagaaat cgggaccacc gtcatcgata tgggcggcgg caccaccaac gttgcctcgt
     1681 tcttcgaaaa tcaattgatc cacacggcgc aaatccgcat cggcgggctg catgtgacaa
     1741 gcgacctggc gaaaggactg tcgacaccgc tggctcacgc ggaacggttg aagacgctgt
     1801 ggggcaatgt ccaggccagt ccggatgacg aacgtgacat gctgccggtg ccgcgtgtcg
     1861 gcgaggcgga ccatcatttg gcaaaagttc cgcgcagcat ggttgttaat atcatccgcc
     1921 cgcgcatcga agagacgttg gaaagcgtgc gtgacaagct ggcggaatcc ggattgtcga
     1981 atgcgaccgg caaccggatc gtgctgaccg gcggtgcctg tcagttgccg ggactgcaac
     2041 atcttgcgtc gcgcatcctc ggccacgatg tgcgtgtcgg ccggccgcaa tcgattcgcg
     2101 gcatgccgga aatctttacc gggccggcat ttgccaccgt taccggcctc ctcaactggg
     2161 ccgccaatga aggcgggact ttccatcaaa ttgatccgag acgcggcggg cgcccgagtt
     2221 ggttccatcg cctcgttaac ttcatcagag atcgggtgtg atggcttgta gcgaatccgt
     2281 ttattcgtct tacaaggact tcgatcgtcc acggggaagg acttcagaat gaccctaaat
     2341 ctcaatacgc cgcagcagat gcacacggac ttcacgccac gaatcactgt tatcggagtc
     2401 ggcggtggcg gcaccaatgc tgtggataac atgatcgcgg caaatctgcg tggtgtggat
     2461 tttgttgtcg cgaacaccga tgcgcagcag ttgatgcaca gtaaagccga tcgccgtgtg
     2521 caattgggac cgcatttaac acaaggtctg ggtgccggcg cgaagcctga cgtcggccgc
     2581 gccgcggccg aggaagcgtc ggatgaactc taccgtcatc tggacgggac ccacatggtg
     2641 ttcattaccg ctggcatggg cggtggcacg ggtaccggcg ccgctccggt gatcgcccgc
     2701 atggcgaagg agcgtggcat cctcaccgtc ggtgtcgtca cgaagccatt cggctttgag
     2761 ggtgcgcggc gtgcgcgggc ggccgacgac ggcatccacg agttgcagca atacgtcgat
     2821 acgctgattg tcattccgaa ccaaaatctg ttccacatgg ccaacgagcg tacgacctgg
     2881 aaagaggcct tcaaaatggc cgaccaggtg ctctacatgg gcgtccgcgg cgtcaccgac
     2941 ctgatgatgg tgcacggcca gatcaatctc gatttcaatg acatcaagac ggtcatggcc
     3001 gagatgggta aagccatgat gggcaccggt gaggcggaag gcgaggaccg tgccaaacgc
     3061 gctgccgagg cggcggtcaa caacccgttg ctggaggaga ccagcatgaa cggcgctcgg
     3121 ggtttgttga tcaatatcac cggcggcgac gacctgacgc tgttcgaggt cgatcaggcg
     3181 gtgagcactg tgcgcgaaca ggtcgacgat gaggcaaatg tgctgttcgg gtcagcgacc
     3241 gatccatctc tggaaggtcg catccgggtc tcggtggtgg caacgggcat cgatcacccg
     3301 caatctcagg aggaggcgcg gccaaagttg gttgcggttg gcggcggcgg tgtcggatac
     3361 gcggacccgc agccggtccc acttccggta ggcggcgtgc cggtgaccgg tggaacagca
     3421 gcgcctcaga tgcaggcgac agatccacgg gcgccgcaaa actccaacgt tactgcgctg
     3481 cgccaccaga ccgttcagca agagcgggtc atcattcggg atcccatgcc gtatccggac
     3541 gatcccatgg acccgcgacg gtcggcacag ggaaatgcgc agccggcgag acagccgtcc
     3601 ggactgttcg cgcacgctcc aggctcggtg ccagtcgaga cggcgccggt ccagggcacc
     3661 ggggagtcaa tgacgcggtc gctgttccaa catgccacag gtttgttccg caagcgtccg
     3721 atgtctgcgt cgacacctga ggtggtggtc cgtcgtcgtg agccgctgac aacggaatcc
     3781 gtccatgtgt tgcaagctac cgaactggtc atggagcccg agcagcggcc aatcgaacgt
     3841 cggaccatgg cgctggacga aagcgggctg gacattcctg catttttgcg ccggcagtcg
     3901 tcgtcggcgt gatcgattat cccgtgcggt tccgatgcca atcggccgca cggggaattg
     3961 gcaggccgag cgtttcccgt aacgtc
//
LOCUS       DATAVD010000055         6739 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_377474, whole genome shotgun sequence.
ACCESSION   DATAVD010000055 DATAVD010000000
VERSION     DATAVD010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6739
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377474"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..515
                     /locus_tag="VHX39_01005"
     CDS             <1..515
                     /locus_tag="VHX39_01005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989726.1"
                     /translation="KLCEEHNITYADIDRIEAVVNWLETLYPSPAFPVRVVEYPPQVG
                     STQYFSAYGAVTRGYPLLRGGQPSPGETDPPEVLELMNRVTLIPMAHRTLFGPRVTVF
                     TKDGRSFTREGTGREFIWNFEDQADRIRPIAQGLAITAERFEGLIDACRTLERQETAW
                     EPLVLSTIPA"
     gene            complement(535..1218)
                     /locus_tag="VHX39_01010"
     CDS             complement(535..1218)
                     /locus_tag="VHX39_01010"
                     /inference="COORDINATES: protein motif:HMM:NF015682.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-4-methyl-2-oxoglutarate aldolase"
                     /protein_id="HEX3989727.1"
                     /translation="MLDNPPLVTIHRGFRRPDPRLIEAFRGAQTSHLADAMDGRGALD
                     YRIKPVDQGNACFVGPALTAFAYPADVLAVFAALSEARPGDVIMCANDAFTKTAVIGD
                     LAAGMMKNAGVAAFVTDGLARDKAGIIAADLPLFCRGIQPNSPAMNGPGIVGAAITLG
                     DVHVNPGDVVVGDADGVVVVPADRLEVVLAKLERVRQAEIRAVQSVLDGATMSEAARK
                     LIAQATIIE"
     gene            1324..2073
                     /locus_tag="VHX39_01015"
     CDS             1324..2073
                     /locus_tag="VHX39_01015"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HEX3989728.1"
                     /translation="MIELSPAPAKLPPGRRVYAIGDIHGCAEQLANLHALIQEDLACR
                     PITSALLLHVGDYVDRGVDTRGVIARLLNGSPIPGTEMVNLMGNHENTMIEALNGERA
                     AATDWLFTGGRPSLQSYGVDPDSPRDTWRAHVPDSHMQFLRGLKLMHHEGEYVFVHAG
                     VRPGVPLAEQARDDLLRMRQPFLYSEMNFGAVVVHGHSPVKAPVIRHNRIAIDTGAVF
                     GGEMTCLVLEGDQLGFLTSEPVGEPVSIAHR"
     gene            complement(2194..2772)
                     /locus_tag="VHX39_01020"
     CDS             complement(2194..2772)
                     /locus_tag="VHX39_01020"
                     /inference="COORDINATES: protein motif:HMM:NF020387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RES family NAD+ phosphorylase"
                     /protein_id="HEX3989729.1"
                     /translation="MSGIRSARDNRLLDALENLPAATGEVTAWCVVRDGREPLRCSAV
                     GGRWDDGTFEVLYTSTRADGAVAEMYFHLARGQPVIPSLVRYRLFELRITLSSCLRFA
                     SLTELASLGLQTASFGQLSYTERVQEYPRTQEIAEVAHFIGRDGMIVPSARAEWPNVI
                     VFCDPAGPDAVEVAKDHDLIDWDVWRKTPLGF"
     gene            complement(2776..3123)
                     /locus_tag="VHX39_01025"
     CDS             complement(2776..3123)
                     /locus_tag="VHX39_01025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989730.1"
                     /translation="MSTKSGAVPRFIDELNEEGGLSGTDIANIAAVSKATVSRWKSGV
                     VKPQPSTQLVLSDLHYVVGRLREYYSADEIRTWLYARHPQLGGARAIDLINQNRSEDV
                     LRALDRLDADVYL"
     gene            complement(3391..4065)
                     /locus_tag="VHX39_01030"
     CDS             complement(3391..4065)
                     /locus_tag="VHX39_01030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HEX3989731.1"
                     /translation="MSKSILPSGGRKLTVNVKTARKRSPASAEWLRRQLNDPYVAAAK
                     QQGWRSRAAFKLLELDDRFHIIRRDARVVDLGSAPGGWAQVAIRRGAGAVVGVDLLPM
                     DPIQGATLLMGDFNDPEMPARLAEVLGGKADLVLSDIAPNTTGHAATDHLRIMALAEL
                     AAAFAREVLAPDGSFVAKVFQGGSERTMLEALKRDFTSVRHAKPPASRKESSELYVVA
                     MGFRGG"
     gene            complement(4076..5143)
                     /locus_tag="VHX39_01035"
     CDS             complement(4076..5143)
                     /locus_tag="VHX39_01035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HEX3989732.1"
                     /translation="MTMRHTTSPDGLGGPPSGEQRVPGPRSPAFAALDLGTNNCRMLV
                     GTPSGNGFRVLDSYSRIVRLGEGLHGSGALCPNAMDRTVAALQDCADRLARSRPRMFR
                     AIATEACRRARNGPEFLCRVKRETGLDVGVISSREEAELALESCTPLLETAGRRALLF
                     DIGGGSTELAWVRVACGPPSLIGYASLPVGVVGLAERFGAAAFTEEGFDAMVEDVTAR
                     LVAFESVHCIGREIRDGGVRLLGTSGTVTTLASIVLNLERYRRALVDGIALSRQDADE
                     ALSSLRSLDREGLALHPCVGPERADFVMPGCAIYAAIASMWPAPDVVVADRGLREGML
                     LRMIRADRARMDRRRSAPDRS"
     gene            complement(5222..5635)
                     /locus_tag="VHX39_01040"
     CDS             complement(5222..5635)
                     /locus_tag="VHX39_01040"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3989733.1"
                     /translation="MPIEFLEETVIVADNDSMMRGLLRTALEQPKRTILLAVDGLEAV
                     ELASQTLATLVLLDLRMPKLDGIEACRQIRSLPKYETVPIAILTVFDAEGMKRRALRA
                     GASAFLGKPFSRAALLAALDPLIAAHRRRVELERY"
     gene            5806..>6739
                     /locus_tag="VHX39_01045"
     CDS             5806..>6739
                     /locus_tag="VHX39_01045"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3989734.1"
                     /translation="MTQISQFVRRAVQTGADKIATVCGDRQRTWREFDDRIRRLAGAM
                     HGLGCKPGDRVGILSLNSDRYLESLFGLSLGGFVFVPINTRLAPPEIVFWLADSGCSA
                     LFVDDAFVPVLPNVLPGAPEVRHVVYIGESTCPPELADYEALLAAAMPFANSIGSDND
                     LAGIFYTGGTTGRSKGVMLSHNNIMSNALNIFPSTLANEDTRYVHAAPMFHLADNAMT
                     YLVTGFRGTHYFMPRYEPLTLMRVIEQYRITLLLIVPTMINMLVNHPDVAKHDLSSME
                     RLLFGASPMPEAVIRRAAEVMPGVQFCHLYGQSES"
BASE COUNT         1335 a         2172 c         1995 g         1237 t
ORIGIN      
        1 caaagttgtg tgaagagcac aacattacct atgccgacat cgaccgcatc gaggcggtcg
       61 tgaattggct ggaaacgtta tatcccagcc cggcgtttcc ggttcgtgtg gtggaatatc
      121 caccacaggt gggttcaacg cagtacttct cggcctatgg tgcggtgacc cgaggctatc
      181 cgttattgcg cggtggacaa ccgtcaccgg gagaaaccga tccacccgaa gttttggaac
      241 tcatgaaccg ggtcacgttg atcccgatgg cacaccgcac attgttcggc ccgcgtgtga
      301 ccgtgttcac caaggacggc cgtagtttca cacgcgaggg aaccggccgc gaattcattt
      361 ggaatttcga ggatcaggca gatcgcatca gaccgatcgc ccagggtttg gcgataactg
      421 cggagcggtt cgaggggctg attgacgcgt gccgcacgct ggaacggcaa gagaccgcct
      481 gggagccctt ggtcttgtcg acgatcccgg cctgatccgc gcgacaacca ccgatcactc
      541 gataatcgtc gcctgcgcga ttaattttcg tgccgcctcc gacatggtcg cgccgtcgag
      601 cacggactgc actgcgcgga tttcagcttg ccgaacccgt tccagttttg ccaatacgac
      661 ctccaatcgg tcagccggaa cgaccacaac accgtcggcg tctccaacaa cgacgtcgcc
      721 cgggttgacg tgcacatcgc ccaacgtaat cgctgcgcca acaattcctg ggccgttcat
      781 ggccggcgag ttgggctgaa tgccccggca aaacaacggc aaatccgcag caataatgcc
      841 agccttgtcg cgcgccagcc catcggtcac gaacgccgcc acaccggcat tcttcatcat
      901 tccggcagcg agatcaccga tcaccgccgt cttggtgaaa gcatcgtttg cgcacatgat
      961 gacgtcaccc ggtcgcgcct cggacagcgc cgcgaatacc gctagcacat cggccggata
     1021 agcgaacgcg gtcaacgccg gtcccacaaa acaggcattt ccctgatcga ccggcttgat
     1081 ccggtaatcc agtgccccgc gcccgtccat cgcatcggca agatgtgagg tctgcgcgcc
     1141 tctgaaggct tcaatcagcc gcggatcagg acggcgaaag ccacgatgaa tggtcacgag
     1201 cggcgggtta tcgagcatcg gctgcctccg gttgcgattt tcctcccgag ctgcggctgc
     1261 agcacaggtc tggcccaatc ccctcttgcc gaaagaccga tcggactgat agccggtact
     1321 gttatgattg aactctcccc tgccccggcc aaactacctc cgggccggcg tgtctatgcc
     1381 ataggagaca tccatggctg tgccgagcaa ctggccaacc tgcacgccct gatccaggag
     1441 gatctggcgt gccgccccat cacttcggcg ttattgttac acgtcggcga ctatgtcgat
     1501 cgaggcgtgg acacgcgtgg cgtcattgcc cgcctgctga acggctcccc gatcccgggc
     1561 accgagatgg tcaatctgat gggcaatcac gagaacacca tgatcgaagc cctgaacggc
     1621 gagcgggcgg cagccaccga ctggctgttc accggtggtc gtccctcgtt gcaaagctac
     1681 ggcgtcgacc cggactcccc acgtgacacc tggcgcgcgc atgtccctga ctcgcacatg
     1741 cagttcttgc gcggactgaa actgatgcac cacgagggcg agtacgtctt tgttcacgcc
     1801 ggcgtcaggc cgggcgtccc gctcgccgag caggcacggg acgacttact gcggatgcgc
     1861 cagcccttcc tgtattcgga aatgaatttc ggcgccgtcg tggtgcacgg gcactcaccg
     1921 gtcaaggcgc ccgtcatccg ccacaaccgt atcgcgatag acaccggtgc cgtgttcggc
     1981 ggcgagatga cctgcctcgt gctggagggc gatcaactag gcttcctcac ctccgaaccc
     2041 gtcggcgagc cggtttcgat cgcgcatcgc tgagtgacgc cgctggccgt gaccctggcc
     2101 agcccacgat gttttggtgg ctcgggacga gtcgaggacc ggctccattt cgatgaactc
     2161 tgatccgttt tcgctgaggc cggaaagcga agtctaaaat ccaagcggag tctttcgcca
     2221 aacatcccaa tcgataaggt catggtcctt tgcgacctcg acggcgtcgg gaccagcggg
     2281 atcacagaac acaatcacgt ttggccattc ggcacgcgca ctcggcacga tcattccatc
     2341 ccgaccaatg aaatgtgcaa cctcggctat ctcctgcgta cgagggtatt cctgcacgcg
     2401 ctcggtatag gacaactgcc caaatgaagc cgtctgcagg ccaagcgatg caagttccgt
     2461 taacgacgca aaccgaaggc aggaagacag cgtgattcga agttcgaaca gacgataacg
     2521 caccagggat gggatgactg gttgtccccg tgcaaggtgg aagtacattt cggcgacggc
     2581 tccgtcggcc ctggttgacg tgtacagcac ttcgaaagtc ccatcgtccc accgaccgcc
     2641 caccgcactg caacgaagcg gttcgcggcc gtcgcgaaca acgcaccagg cggtcacctc
     2701 gccagttgca gcagggaggt tctccagagc gtcaagcagg cgattgtcgc gggcggacct
     2761 gataccagac acggattaaa ggtagacatc cgcgtcgagg cgatcgaggg cacgcagaac
     2821 gtcctccgag cggttctggt tgatgagatc aatggcacgc gctccgccaa gctgcggatg
     2881 acgcgcatac agccacgttc tgatttcatc agcggaatag tactcgcgca ggcgaccaac
     2941 aacataatga aggtcggaga ggacaagttg tgtgctcggt tgcggcttga ctacgccaga
     3001 cttccagcgt gatacggttg ccttcgagac tgcggcgatg ttggcaatat cggtgccact
     3061 gaggccgcct tcctcattca attcatcgat aaacctcggg actgccccgg atttcgtgct
     3121 catggccgat ctctgatcgc acgttctctt gcatggcgac tgccgatcgg aacttgtgct
     3181 gacattggct gttatcgcat cagtgtttca caagtaggat agactgaaac gataatgcgg
     3241 tcaaccgcct ttgaaacgca agcgtggcac gatggcggga cgaggcgcgc cgttattcgg
     3301 gacaaagcct gttcgcctcc gaggagacgc aattcttcac ccgaatggcc cgacagcgcg
     3361 cggccgggtg gtgcccaaac agcgaaccgc tcaaccgccc cggaacccca tcgcaaccac
     3421 gtataactcg ctcgactcct tgcggctcgc cggcggcttg gcatggcgga cgctggtaaa
     3481 atcccgcttc agcgcctcca gcatcgtccg ctccgagccg ccctggaaaa ccttcgccac
     3541 gaacgagcca tctggcgcaa gcacctcccg cgcgaaagcg gcggccagtt ctgcgagggc
     3601 cataattcgc aggtgatcgg tggcggcgtg cccggtcgtg ttcggagcga tgtcggacag
     3661 cacgagatcg gccttgccgc ccagtacttc cgcaagccgt gccggcatct ccggatcatt
     3721 gaaatcgccc atcaaaaggg tcgcgccttg gatagggtcc attggcaaaa ggtcgacccc
     3781 cacaacagcg ccagccccgc gccggatcgc cacctgcgcc cacccccccg gtgccgagcc
     3841 gagatcaacg acccgcgcat cgcggcggat gatgtggaaa cggtcatcca actcgagcaa
     3901 cttgaaggcc gcccgcgacc gccagccctg ctgttttgcc gccgcgacat acggatcgtt
     3961 caattgccgg cgcaaccact cagccgacgc cgggcttcgc ttcctggcgg tttttacgtt
     4021 gaccgtcagc ttgcggccgc cggacggcag gatgcttttg ctcatgcacg gagcttcatg
     4081 atcggtccgg tgcgctccgg cggcggtcca ttctggcgcg atcggcgcgg atcatccgca
     4141 gcagcatgcc ctcacgcagc ccacgatccg cgacaaccac gtcgggtgcc ggccacatcg
     4201 aggcgatcgc ggcataaatc gcacagccgg gcatgacgaa atcggcccgt tccggcccga
     4261 cgcacggatg cagcgcgaga ccttcgcggt ccagcgagcg aaggctggac aatgcctcat
     4321 ccgcgtcctg gcggctcagc gcaatgccgt cgacgagcgc ccggcgatac cgctcgaggt
     4381 tcaacacgat gctcgccaga gtggtcaccg tgccggaggt gcccaacaag cgtacaccgc
     4441 cgtcgcgaat ttcccgccca atgcagtgca cgctttcgaa cgcgacaaga cgagcggtta
     4501 cgtcctcaac catggcgtcg aagccttctt cggtgaaggc ggcagcaccg aaccgctcgg
     4561 ccagaccgac gacaccaacc ggcagcgacg catatccgat cagcgacggc ggcccacacg
     4621 ccacgcgtac ccaggcgagc tcggtcgagc cgccgccgat atcaaacaac aacgcccgcc
     4681 gacccgccgt ttccaacagg ggtgtgcagg actccagggc gagttccgct tcctcccggc
     4741 tggatatgac gccgacatca agcccggttt ctcgtttgac ccggcacaga aattcggggc
     4801 cgttgcgggc acggcggcat gcctcggtgg cgatggcgcg gaacatacgc gggcgcgacc
     4861 gggccagccg gtccgcacaa tcctgcaaag cggccaccgt ccggtccatc gcgttgggac
     4921 acagcgcgcc cgaaccatgc aggccctcgc ccaggcgcac gatacgcgaa tagctgtcca
     4981 acacccgaaa cccgttgccg gacggcgtgc cgaccagcat ccggcaattg ttcgtgccaa
     5041 gatcgagggc ggcgaacgcg ggagaccgtg gcccagggac gcgctgctcc ccagaggggg
     5101 gccctccgag gccatccggc gaggtggtat gtctcatcgt catcgtacca ttgtcgtccg
     5161 cgcatggcgg gcgggcaagc gggggtgtgg gttggtatat gggaccgaat gcagctcgcg
     5221 gttagtagcg ctccaattcg acgcgccgcc ggtgggctgc gatcagcggg tccagcgctg
     5281 ccagcaacgc cgcgcgagaa aacggtttgc ccaggaatgc gctcgcgccg gctcgtagcg
     5341 cgcggcgttt catgccctcg gcgtcaaata ccgtcaggat ggcgatcggc accgtctcgt
     5401 acttcggcaa ggaccggatc tgccgacagg cttcgatccc atcgagcttc ggcatgcgca
     5461 aatccagcag cacgagcgtt gccagtgtct gcgaagcaag ttccacagcc tcgaggccat
     5521 cgacggcgag gagaatggtc cgtttaggct gctccaacgc agtgcggagc aggccgcgca
     5581 tcatcgagtc gttgtctgct acaatcacag tttcttcgag gaactcgatt ggcaagaccg
     5641 tctcccgttc acaccacgac gctcattcac cattgctcat gtgcatgcat gttatcggca
     5701 acctgttaat gcagtgctaa ccgcgcgacg gaaaccggcc gggttaacgt cgttgccaac
     5761 ctgctcgccg atgtggtgtg gttgcgatcg aggggaggca caaccatgac gcaaatctcg
     5821 cagttcgtgc gccgcgcggt acagaccgga gcggataaaa tcgcgaccgt gtgcggcgac
     5881 cgccagcgga cctggcggga attcgacgac cggatccggc ggcttgccgg ggcgatgcat
     5941 ggcctcggct gcaaaccggg cgaccgggtt gggatccttt cgctgaactc agaccggtat
     6001 ttggaaagcc tgttcggact ttcccttggc ggcttcgtat tcgtcccgat caatacccgg
     6061 ctcgcgcctc ccgagatcgt gttctggcta gcggattccg gctgctcggc gctgttcgtc
     6121 gatgacgcgt tcgttccggt gctgccaaat gtgttacccg gagcgccgga agtcaggcac
     6181 gtggtctaca tcggtgaaag cacctgcccg ccggaactgg ccgattatga agcgctgctg
     6241 gccgccgcca tgccgttcgc caactcgatc ggttccgaca acgacctggc cggcatattc
     6301 tacaccggtg gtaccactgg ccgttccaaa ggcgtcatgt tgagccacaa caacatcatg
     6361 tccaacgcgc tgaacatttt tccaagcacg ttggccaatg aggacacgcg gtacgtgcat
     6421 gccgcaccga tgttccatct ggccgacaac gcaatgacct atctggtgac cggatttcgc
     6481 ggcacgcatt acttcatgcc gcgctacgaa cccttgaccc tgatgcgcgt gatcgagcaa
     6541 taccgaatca ctcttctgct gatcgtgccg acaatgatca acatgctggt caatcacccc
     6601 gacgtggcga agcacgattt gtccagtatg gagcggttgc tgttcggcgc ttcgccgatg
     6661 ccggaggcag tgatccggcg cgccgcggag gtcatgcccg gagtacagtt ctgtcattta
     6721 tatgggcagt ccgaatctt
//
LOCUS       DATAVD010000056         2670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2424827, whole genome shotgun sequence.
ACCESSION   DATAVD010000056 DATAVD010000000
VERSION     DATAVD010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2424827"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..950)
                     /locus_tag="VHX39_01050"
     CDS             complement(<1..950)
                     /locus_tag="VHX39_01050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3989735.1"
                     /translation="MSAPATRWGSSAPVRYPDPDVIVLDPRFQKIFIGNAGLRRIATG
                     FDFTEGPVWFGDGRYLLFSDIPNDRIMRWDETTGGVSVFRNPSHYANGNTRDRQGRLI
                     TCEHDTQRLTRTEYDGTVVVLADQWEGKRLTGPNDVVVKSDGTIWFSDNGAGTRGNYL
                     GHTAPQEHPFRVYRFDPRTNTLTIAVGDMARPNGLCFSPDETRLYVVDTPGTGPKSTF
                     VYDIADNGTRAVNGRVFFDGAGWADGIRCDTEGNVWCGLSGGEGEDGVGVFAPDGTPI
                     GRILLPERCANVCFGGKKRNRLFMAASQSVYALYVEAQGA"
     gene            complement(1102..1356)
                     /locus_tag="VHX39_01055"
     CDS             complement(1102..1356)
                     /locus_tag="VHX39_01055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989736.1"
                     /translation="MTMVIQHLRCMSHEVRDKTVSINKDKTQFLVSKMDVVAISRFVV
                     LAQCAGRIHHKREPLLVAMEAGANRFGYRPHDQFDERHQG"
     gene            complement(1553..2524)
                     /locus_tag="VHX39_01060"
     CDS             complement(1553..2524)
                     /locus_tag="VHX39_01060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX3989737.1"
                     /translation="MAGNIAPAPAMGAREWVMLLALAALWGGSFFFFKVLATALPPFT
                     VVLGRVGLAAVILNLWLALRRDFMPASPRLWTDFIVMGVLNNVVPFSLIVFGETRISS
                     GLASILNATTPLFTVLVAHVLTTNEKLSRGKFAGVMVGFAGVAVLVGPAALAAIGGES
                     AIGEVACLGAALVYAFAGIYGRRFNCVSPIKVATGQVTGSTLVLIPVVALVDRPWTLP
                     APDATTWGALIGIALLCTVLAYILYFRILAAAGATNLLLVTFLIPVSAILLGSLVLGE
                     PLLAREFIGMALIGAGLAFIDGRLLERLVPRSKPLSVPFERPHDFEV"
BASE COUNT          533 a          825 c          829 g          483 t
ORIGIN      
        1 atcgcgccct gggcctcgac gtacagcgcg tagaccgact ggctggcggc catgaacagc
       61 cggttccgtt tcttcccccc gaagcacaca ttcgcgcacc gttccggcag cagaatgcgg
      121 ccgatcggcg tgccgtccgg cgcgaacacg ccaaccccat cttcaccttc tccaccggaa
      181 agcccgcacc atacgttccc ctcggtatcg caacggatac catccgccca acctgctccg
      241 tcgaagaata cccgcccatt caccgctcgg gttccgttgt cggcgatgtc gtagacaaaa
      301 gtgcttttcg ggccggtgcc gggtgtgtcc acgacataca ggcgtgtctc gtcgggggag
      361 aagcacaggc cgttgggcct cgccatgtcg cccacggcga tggtgagggt gttggtgcgg
      421 ggatcaaagc ggtagacgcg gaacggatgc tcctgcggcg cagtgtgtcc gaggtaattg
      481 ccgcgcgtgc cggcgccgtt gtcgctgaac cagatggtcc cgtcggattt caccaccaca
      541 tcgttcgggc cggtcagtct cttgccctcc cactggtcgg cgaggacaac gacggtgccg
      601 tcatactcgg tgcgggtcag gcgctgggtg tcgtgttcgc aggtgatcag ccggccctgg
      661 cggtccctgg tgttgccgtt ggcgtagtgg gaaggattgc ggaacacact gacgccgccg
      721 gtggtttcgt cccagcgcat gatgcggtcg ttgggaatgt cggagaacag cagataccgc
      781 ccgtcgccga accagacagg gccctcggtg aagtcgaacc cggtggcgat gcgccggagg
      841 ccggcgttgc cgatgaagat cttctggaac ctgggatcca gcacgatcac gtccgggtcc
      901 gggtagcgaa cgggcgctga cgagccccag cgtgtggcgg gtgctgacat ctgatgtttc
      961 cttccctcaa tcggacatga ccataaactc tatgggggct cgtcacgcaa atgcatgttg
     1021 gagtcatcga cgacagggcg gccgatcgtg tggtctggaa cccataatga aggcttggtg
     1081 ttgcttgatc gtcgcatcca attatccctg atgacgttcg tcgaactggt catgtggtcg
     1141 gtacccaaag cggtttgcgc cagcttccat ggctacaagt aacggttcgc gcttgtggtg
     1201 aatgcgacct gcacattgcg ccagtacaac gaaacgggaa atggcgacca catccatctt
     1261 ggagacaagg aactgcgttt tgtctttgtt gattgagaca gtcttgtcgc ggacctcatg
     1321 gctcatgcaa cgcaggtgct gaatgaccat cgtcacgttc gctctctcgc cgacctgctt
     1381 acggattttt cccgtggctg accgggcagg gcgccccagc gccccgcatc ggcttcgcat
     1441 ggattttggt cggttgagcc ggaaatgccg cgccacccgc cacggcaccg gtcctctacc
     1501 cggcagcctg tcatgaacca actcgggaga cgttggtcat gttgactccg ttctaaacct
     1561 caaaatcatg aggcctttcg aatggcactg aaagcggctt cgaacgaggg actagacgtt
     1621 caagaagcct gccatcgatg aaggcgaggc cggcgccgat caaggccatc ccgataaact
     1681 cccgggccag cagtggttca cccaagacca aggagccgag caggatcgca ctgactggta
     1741 tcaggaatgt cacgaggagc agattggttg ctcccgccgc ggcaaggatg cggaaataga
     1801 ggatgtaggc gagcaccgtg catagcagtg caatgccgat cagcgcgccc caggtcgtcg
     1861 cgtccggtgc cggcaacgtc caaggccgat cgacgagggc gaccaccggg atcagcacga
     1921 gcgtgctgcc ggtcacctgg ccggtcgcca ccttgatggg tgagacacaa ttgaaccggc
     1981 ggccatagat gcccgcgaag gcgtaaacaa gcgctgcccc caggcaggcg acctcgccga
     2041 tcgcgctttc cccgccgatg gccgccagcg cggccggacc gacgagcacg gcgacaccgg
     2101 cgaagccgac cattacgccg gcaaatttac ctcggctcag cttctcgttc gtggtcagca
     2161 cgtgtgcgac gagtaccgtg aacaacggcg ttgtggcatt gaggatagat gcaagcccgc
     2221 ttgaaatccg cgtttcgccg aacacgatca gcgaaaaggg gacgacgttg ttgagcacgc
     2281 ccatgacgat gaagtcagtc cagagccggg gggaggccgg catgaagtcg cgccgcagcg
     2341 caagccacag gttcaggatg acagccgcca aaccgacccg cccaagcacc acggtgaacg
     2401 gtggcaacgc ggtggcaagc accttgaaga agaagaatga cccaccccac agcgcagcga
     2461 gggccagcag catgacccat tcccgggcgc ccattgccgg ggccggtgcg atattgcctg
     2521 ccatcaaacc gatccttttc agctcgacag aaacgatatc gacgctgacg cggcgcggca
     2581 ctccggatct tgcgcccgca atccgagata ggcgttcttt gtggacagat ggagatcagc
     2641 gctcagccgg ccgtcccgct caaccggtca
//
LOCUS       DATAVD010000057         2782 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1308249, whole genome shotgun sequence.
ACCESSION   DATAVD010000057 DATAVD010000000
VERSION     DATAVD010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2782
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1308249"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..377
                     /locus_tag="VHX39_01065"
     CDS             <1..377
                     /locus_tag="VHX39_01065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX3989738.1"
                     /translation="DLHANRWVLMFLINIFLLVCGFFIPPAAIILMTSPILLPIITAA
                     GFDPVWFGVILTINMEIGLIHPPVGLNIYIVNAIVPDVPIAKVMWGTLPYVLCMMLAI
                     VIMCVFPQIATWLPDHLMGASK"
     gene            647..1930
                     /locus_tag="VHX39_01070"
     CDS             647..1930
                     /locus_tag="VHX39_01070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989739.1"
                     /translation="MALVLSGVTASAQSASDVAGNIDPLFQGLLAQPASFDNTLKYGV
                     SATQAGDIESAIGTFEQLLFYNPTLSRVRFELGVLYYRLGSYDMARGYFQSALEMKDI
                     SADMRQKADEFLAVIDKKLQPDQFSGFAQAGLRYQTNASAGAGPQPALASGLTFDKRF
                     FAQSDWNGFGAFGLNYSHDFGNQRGDTFEATILGYDAQQFTLHQFDIGLMELRAGPRF
                     AISADGANGATLKPYAIATGAVLADAPYYGGVGGGVTMHANVGNVALDPYVEIVQQSF
                     RNSSFYPLASGLSGTQSTYALAANGPIFAGLDWQSRVAFAHANDVFDPYSYNRYSADV
                     WLPWKFTMAGDSRAWTLTPTAGVSRWLYKAPDPAIDPTTTQHSLEWRVGLGLDVPIWQ
                     QFTLGLLVEYRTVSSNVAVFSMHDLAVTAGPALKF"
     gene            2015..2752
                     /locus_tag="VHX39_01075"
     CDS             2015..2752
                     /locus_tag="VHX39_01075"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR family protein"
                     /protein_id="HEX3989740.1"
                     /translation="MGTTTAVNPLSESTPPGAQTVALRVGSHVVYKERIHTTPAGSVQ
                     LLFLDRSTLSIAPNTNLLIDQYVYDPNSNTGHTTISLTEGALRFVGGKLSHQGAASIV
                     TTAATIGIRGGTVTIVHGQDGTRIINHFGTITIQNDGGTTTINRSGFAVTVHDWNTPP
                     GEPERVTAAEIAHYLNLLTSKPGQDGGVPGFKNAYLDGIGALQGIIDADTPPFPMNNG
                     ESNAFQIIIQATQHGTGPIQPPRPRTR"
BASE COUNT          564 a          861 c          775 g          582 t
ORIGIN      
        1 ccgacctgca cgccaacaga tgggtgttga tgttcctcat caacattttc ctgttggtct
       61 gcggcttctt catcccgccg gccgccatta tcctgatgac ttcgccgatc ctgttgccga
      121 tcatcactgc ggccgggttc gatccggtct ggttcggcgt gatccttacc atcaatatgg
      181 agataggact gattcacccg ccggtcggtc tcaacatcta catcgtcaat gcgatcgtgc
      241 ccgacgtgcc gatcgccaag gtgatgtggg gcacgctgcc ttacgtgctg tgcatgatgc
      301 tggcgatcgt gatcatgtgc gtcttcccgc agatcgctac ctggctgccg gaccatctca
      361 tgggcgcgag caaataggca ctatcttacc attcggactg ccgcatttca cttgcacgcg
      421 ccaatcttgg gcaaatcgaa acggcacgca ggcttttgca gcctcgactt gatcctgcca
      481 ctgtattaag ttggtgttgt cccgtcggga cgagcggcaa gtaataccgc cgtcgatgct
      541 ttgctgattt cgacagggcc gccgggatcg gggcaacggt aatattttga aactctctgc
      601 ttggcgcgcg attccgaagc aatttgcggg cgtcgttacg ccgataatgg cactcgtcct
      661 gtccggagta acggcctccg cccaatccgc ctccgacgtg gcaggaaata tcgatccgct
      721 attccaagga ttgctggccc aaccggcgag ttttgacaac acgctcaaat atggcgtgag
      781 cgcaacgcag gccggcgaca tcgagtcagc cattggcacc ttcgagcagc ttctcttcta
      841 caatccgacg ctatcgcgcg tgcgcttcga attgggtgtc ctctattacc ggctcggctc
      901 ctacgacatg gcacgcggct attttcaatc tgcgttggag atgaaggata tatctgccga
      961 catgcggcag aaggccgacg agtttcttgc cgtcatcgac aaaaagctgc agcccgatca
     1021 attcagcggc ttcgcccagg cggggctgcg ctaccagacg aacgcaagcg cgggggcagg
     1081 accgcaaccg gcgctggctt cgggcctgac attcgacaaa cgctttttcg cccagagcga
     1141 ctggaacggg tttggcgcct ttggcctgaa ctatagccat gatttcggca accagcgcgg
     1201 tgacacgttc gaagcgacaa ttctcggcta cgacgcgcaa caattcacat tgcatcagtt
     1261 cgacatcggc ttgatggaat tgcgcgcggg cccgcgcttc gcgatctctg cggacggcgc
     1321 aaacggagca acgctgaagc cttatgcgat cgcgaccggc gccgtattgg cggacgcgcc
     1381 ttactacggt ggcgtcggcg gtggcgtgac gatgcatgcc aacgtgggca acgtcgcgct
     1441 cgatccctac gttgaaatcg tgcagcaaag cttccgtaat tccagttttt atcctctcgc
     1501 cagcggcttg agcggcacgc agtcgaccta tgcgcttgcc gccaatggac ccatctttgc
     1561 cgggctcgat tggcagtcgc gcgtcgcgtt cgctcatgcc aacgatgtct ttgatcccta
     1621 cagctacaat cgttactcgg ccgacgtgtg gctgccctgg aaattcacga tggcgggaga
     1681 cagccgcgcc tggactttga ctccgactgc aggcgtcagc cgctggttgt acaaagctcc
     1741 cgatccggcc atcgatccga cgacgaccca gcatagtctc gagtggcgcg tcggcctcgg
     1801 cttggacgtc ccgatttggc agcagttcac ccttgggctg ctggtggaat atcgcaccgt
     1861 gtcgtcaaat gtggcggttt tctcgatgca cgatctggcc gtcacggctg gaccggcgct
     1921 gaaattctga aggcactcaa tgggacttcg gacgagcatt gcggttctgg tcgcaggcgt
     1981 cgccctggca ggcactcctg ctgtagcgca agacgtgggg accacaaccg cggtcaatcc
     2041 gttgtcggag agcaccccac cgggcgccca gactgtagcg ctgcgcgtcg gatcgcacgt
     2101 tgtttacaaa gagcgcattc acaccacgcc ggcaggaagc gtccaactgc tctttctcga
     2161 tcggtccacg ttgagcattg cgcccaacac gaaccttttg atcgaccaat acgtttacga
     2221 cccgaattcc aacaccggcc acaccacgat ctcgctgacc gagggcgccc tgcgtttcgt
     2281 cggcggcaaa ttgagccacc aaggcgcggc atcgatcgtc accaccgctg ccacaatcgg
     2341 aatccgcggc ggaaccgtca caattgtcca cggccaagac ggcacgcgca tcatcaacca
     2401 cttcgggacg ataacaatcc agaacgacgg cggaacgaca acgatcaacc gttcaggctt
     2461 tgcggtgacg gtccatgact ggaacacgcc tccaggcgaa ccggaacgag tcactgccgc
     2521 ggaaattgct cactatttga atttattgac gagcaaaccg ggacaagacg gcggcgtacc
     2581 gggtttcaaa aatgcctatc ttgatggcat cggcgcgttg caaggcatca tcgatgccga
     2641 cacgccacct tttcccatga acaacggcga gtccaacgct ttccagatca tcatccaggc
     2701 gacgcagcac ggcaccggac caatccaacc accacggccg cgcactcgct gatttgacga
     2761 cgagcggatc gcatcttgaa gc
//
LOCUS       DATAVD010000058         4184 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1308310, whole genome shotgun sequence.
ACCESSION   DATAVD010000058 DATAVD010000000
VERSION     DATAVD010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4184
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1308310"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            323..736
                     /locus_tag="VHX39_01080"
     CDS             323..736
                     /locus_tag="VHX39_01080"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070497 -
                     6-carboxy-5,6,7,8-tetrahydropterin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HEX3989741.1"
                     /translation="MFSLTVCDHIMIAHSFQGEEFGPAQRMHGATFAVEAEFRAPALD
                     DHQLLVDIGLAKTELRRVLETVDYSNLDENPLFLGLNTTTEYMAFHIHQLLAAACVDG
                     RLGHGGRAVTSLKILLREAPTAWAAFEGPLTTGKP"
     gene            736..1473
                     /locus_tag="VHX39_01085"
     CDS             736..1473
                     /locus_tag="VHX39_01085"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX3989742.1"
                     /translation="MSAVTVETKGAISIIRINRPERLNAINQDVAVELQRAFKVFDAD
                     DDQRVAVLSSAGQRAFSSGADVSNLPELWRAIPTVGFDTEKPIIAATTGWVIGGAIVM
                     VMMCDLMVSTEDTTFYYPEAKLGTTAGGISSLVTRMPHKLAMEIMLLGSKVPAQRAYD
                     VGFVNRVVPNGQHETVALEMAAELLESAPLVIGALKRLVAQVMPVGPIERMVGISQTI
                     ARVRQSEDMQEGIAAHKEKRKPRFKAR"
     gene            1738..2619
                     /locus_tag="VHX39_01090"
     CDS             1738..2619
                     /locus_tag="VHX39_01090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989743.1"
                     /translation="MKPADLLRKSCRFRPTRSLVTRPGPVRTLIVVFAAVALSGCGVR
                     VPDLEEIPNGPGSAQSFEQIIVHSIQCSIKDAVDYVKDQDIKLAPLNNIDRTRTPFWF
                     DTWGIQATLTLAVAEKTDVNPSTTWIPSPVKALFSLAAGVDVSSQATRTDTLNFYYNV
                     TDIYKERACASPTVITEPTGSLLVNNNLKFREFLVDQIFNVGTGELTSIQKNGLTHDV
                     KFEVVSSATLSPSWKTRYWTINPTGSLLTANRDRTHEISVTFGPSDPEQKMLVGPAAG
                     QVIASQLATAISARINP"
     gene            3007..3951
                     /gene="lipA"
                     /locus_tag="VHX39_01095"
     CDS             3007..3951
                     /gene="lipA"
                     /locus_tag="VHX39_01095"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010501738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEX3989744.1"
                     /translation="MATHLVVDHRQSSSPRHPEKANRPDHPIQRKPAWIRVKAPNHPV
                     YHQTRALMRENRLTTVCEEAACPNIGECWANRHATMMIMGDTCTRACSFCNVATGMPG
                     PLDPDEPRRVADAVAKLGLRHVVVTSVDRDDLTDGGAAHFAATIAAIRTAAPDTTVEV
                     LTPDFLRKPGAMEIVADAGPDVFNHNLETVPRLYPTIRPGARYYQSLRLLDQVKRRTP
                     KVFTKSGLMVGLGESRTEIMQVMDDLRIADVDFLTIGQYLQPTIKHAAVEAFITPDEF
                     ADYASLARAKGFRLVSASPLTRSSYHADDDFAALRATR"
     gene            3951..>4184
                     /locus_tag="VHX39_01100"
     CDS             3951..>4184
                     /locus_tag="VHX39_01100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004449162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HEX3989745.1"
                     /translation="MPTHAEKQILPYQPEQLFELVLDCAKYPEFLPWCVAARVRSRTD
                     KEVLADLTIGYGPFRESFTSRVTPSRPDRIDVRY"
BASE COUNT          834 a         1293 c         1252 g          805 t
ORIGIN      
        1 acaatcgaat ggtccgatgc ggcagagtgc gccccttgaa cggaattgtc aacttaaaac
       61 aaatgtgcct tcgccggcgc acggcttcgt tctggtagcg gattattacg tcgtttcgga
      121 caaatgccgg aagtagcgcg aaactcgcca ttcgtcttgt tgaggcaatg attctgcctg
      181 taggagcgat ccgcattgcg ctcgccatgg cttcggggtg catcctggcc ggtcagcgat
      241 ctgggccgcc tgcggggcaa ggcgccgacc ggcccggcgg ctggccattg cggcgctccg
      301 gttttgatgt gagagataat caatgttcag cctgaccgtc tgcgaccaca tcatgattgc
      361 ccacagcttc caaggcgagg agttcggccc ggcgcagcgc atgcacgggg cgacgtttgc
      421 agtggaggcg gagtttcgcg cgccggcgct cgatgaccat cagttgctgg tcgatatcgg
      481 cctcgcgaag acggagttgc ggcgcgtgct cgaaaccgtc gattacagca acctcgatga
      541 aaatccgttg tttttggggc tcaatacgac gaccgaatat atggccttcc atattcacca
      601 gctgctcgct gctgcgtgtg ttgacgggcg gctgggtcac ggtggtcgcg cggtgacatc
      661 attgaagatc ttgctccgcg aggcgccgac ggcatgggcc gcgttcgagg ggccgcttac
      721 gacagggaaa ccgtgatgtc cgctgttacc gttgagacca agggcgcgat ttcgatcatc
      781 cggatcaacc ggccggaacg gctgaacgcg atcaaccagg acgtcgcggt cgaattgcag
      841 cgcgcattca aggtattcga tgccgatgac gaccagcgcg ttgcggtgct gagcagtgcg
      901 ggacagcggg cgttcagctc gggcgctgac gtgtcgaatc tgccggagtt gtggcgtgcg
      961 ataccgaccg tcggtttcga taccgaaaag ccgatcattg cggcgacgac gggatgggtg
     1021 atcggtggcg cgatcgtcat ggtgatgatg tgcgacctca tggtttcgac ggaagacaca
     1081 acattttatt atccggaggc gaagctgggc accacagcgg gcgggatcag ttcgctggtg
     1141 acacgtatgc cgcacaagct ggcgatggaa atcatgttac tgggctcgaa ggtgccggcg
     1201 cagcgggcgt acgacgtcgg ctttgtgaac cgggtggtgc cgaatggcca acacgaaacg
     1261 gtggcactgg aaatggcggc ggagttgctg gagtcagcgc ctctggtgat cggcgcgctg
     1321 aagcggttgg tggcccaggt gatgccggtc gggccgattg agcggatggt ggggatcagc
     1381 cagaccattg cccgggtgcg gcagtcggag gatatgcaag aggggattgc cgcccacaag
     1441 gagaagcgga agccgcggtt caaggcccgg taggcgctcc tctcggtgcc tttgcctgac
     1501 aaatttagcg acccgtagac gcaacgccgg ccaatggccg ccgcgtgttt tccggaatgg
     1561 cggatttatg gtcgcgttcc gtgttcactt gtcaccatta ctgagaatct gatagggttc
     1621 ccctgttgcc caggcgacgg ggggttattc gtatacgaag ttgattggcc ggcgcaatga
     1681 ttggcctgat gcgcgcgcgc cagtgttgtg atttttgccg aaaggaagaa gaagacagtg
     1741 aaacctgccg accttttgag aaaatcatgc cgtttccggc cgacgcgttc gctcgtcacg
     1801 cggcctggcc cggttcggac gctgattgtt gtctttgcgg cagttgcgct ttccggttgc
     1861 ggggtccgtg tccccgacct ggaggaaata ccaaacgggc ctggcagtgc gcagtctttt
     1921 gagcagatta tcgttcacag catccaatgc agcatcaagg atgccgtcga ttacgtgaag
     1981 gaccaggaca tcaagctggc gccgctgaac aatatcgacc gtacacgtac cccattctgg
     2041 ttcgacacat ggggcatcca ggccacactg acgttggccg tcgcggagaa aaccgacgtt
     2101 aacccatcaa caacgtggat ccccagtccc gtgaaagcgc tgttcagcct ggcggccggc
     2161 gtcgacgttt cgtcgcaggc cacgcggacg gatacattga acttctatta taacgtcact
     2221 gatatttaca aggagcgcgc ctgcgcctcg ccgacggtca taacggagcc gaccggatca
     2281 ctgttggtca ataacaacct taaattcagg gaatttctgg tagatcagat attcaacgtt
     2341 ggcactggcg agttgacgtc gatccagaag aacggactga cccacgatgt caaattcgaa
     2401 gttgtttcca gtgccaccct cagcccgtcc tggaaaacca ggtattggac gatcaatccg
     2461 acaggctcgc tgctgacggc aaatcgagat cggacccatg agatctcggt taccttcggc
     2521 ccgtcggacc cggaacagaa aatgctcgtt ggtccggctg ctggccaggt gatcgcatcg
     2581 cagctcgcga ccgcgatcag cgcccgcatc aatccatagc tttgcaacct gccgaggagg
     2641 atgagatggc gtccgacact cactatttcc caaccgaaga tcccaattgg tttattgcct
     2701 gcgactttaa tccgcaggac ggtcagtaca atttgaatcg ccggaggatt ccggccagcg
     2761 cgctcccgca gccaggtcac gccgcaatcc aggtggtatc ggtcccaggc acaacgaaaa
     2821 aaacctgaca aggggccgcg gcccgccacg ggacgataac gctcgcggcc ggaaagtggg
     2881 cgcaatcggc acctcggaaa tcgcccgtgg ggcgacctcg cgcagccagc gcggccggct
     2941 ggccagcata atgagcgata cggagccttg acccccccat cgccaaccgc cacttctctc
     3001 cccgccatgg caacgcatct cgtcgtcgat caccgccaaa gttcgtcccc tcggcatccc
     3061 gagaaggcga accgtccgga ccacccgatc cagcgcaagc ccgcctggat ccgcgtcaag
     3121 gcgcccaacc acccggttta ccaccagacc cgcgccctga tgcgcgagaa ccgcctgacg
     3181 accgtctgcg aggaagccgc gtgtcccaac atcggcgagt gttgggccaa ccgtcacgcc
     3241 accatgatga tcatgggcga cacctgcacc cgcgcctgct cgttctgcaa tgtcgcaacc
     3301 ggcatgcctg ggccgctcga ccccgatgaa ccgcgccgcg tcgccgatgc cgtcgccaaa
     3361 ctgggcttac gccacgtcgt ggtcacgtct gtcgaccggg acgatctgac cgacggcggc
     3421 gccgcccatt tcgctgccac tatcgccgcg atccgcaccg ccgcgcctga tacgacggtg
     3481 gaagtcctga cccccgactt cctgcgcaaa ccaggagcca tggaaatcgt cgctgacgcc
     3541 ggccccgacg tgttcaacca caacctggaa accgtgccgc ggctttaccc aacgatccgg
     3601 cccggcgcgc ggtattacca gtcgctgcgc ctgctcgatc aggtcaaacg gcggacgccg
     3661 aaagtgttca ccaaatccgg cctgatggtc ggtctcggcg aatcgcgcac cgaaatcatg
     3721 caggtcatgg acgatctgcg catcgccgat gtcgacttcc tgaccatcgg ccaatacctg
     3781 caacccacca tcaagcacgc cgcggtcgag gctttcatca cgcccgacga attcgccgat
     3841 tatgccagcc ttgcccgcgc caaagggttt cggcttgtct cggcgagtcc gctgacccgc
     3901 agttcctacc atgcggacga cgactttgcc gcccttcgcg ccactcgctg atgcccaccc
     3961 acgcggaaaa gcaaatcctc ccctaccagc ccgagcaact tttcgaactt gtcctcgact
     4021 gtgccaaata tcccgagttc ctgccgtggt gcgtggcagc ccgcgtccgt tcgcgcacgg
     4081 acaaagaagt cctcgccgac ctgaccattg gctatggccc gttccgggaa tccttcacca
     4141 gccgggtcac gccatcccgt cccgaccgga tcgatgtccg ttac
//
LOCUS       DATAVD010000059         1912 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1680967, whole genome shotgun sequence.
ACCESSION   DATAVD010000059 DATAVD010000000
VERSION     DATAVD010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1912)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1912)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1912
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1680967"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1275)
                     /locus_tag="VHX39_01105"
     CDS             complement(<1..1275)
                     /locus_tag="VHX39_01105"
                     /inference="COORDINATES: protein motif:HMM:NF013106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HEX3989746.1"
                     /translation="MRAGEPLVPPRRRAAPASAAPPPTEPPAKKKRRRRRQRHWIVSA
                     FHGLMSALVGLVRAAGIAGAAGGWMLYQHFAAGLPDVDGLRGYQPRVMSRVFASDGEL
                     LEDLANERRIYLPINAIPQIVKQAFISAEDKNFYSHKGVDPLAILRAAATNLMEHDRG
                     RRPFGASTITQQVAKNMLLDNEVTFARKAKEAILAFRIEKTMSKNQILELYLNEIYLG
                     LGAYGVAAASEAYFNKPLDQLTVPEAAFLAALPKAPNNYNPFRNPDLARAQRARVLNR
                     MTEDGVITAGQAAEYKQEPIVPVAFQHPQVVSDADWFAGEVRRQLIAQFGIDNATEGG
                     LQVRTSLDPALQVAANKALRDGLIAYDHRLGGWRGPVTHIDSAALDTDWATLLAKVAR
                     TPGMLPTWRLGIVLNTTDNDARVGWLSGQAVRG"
     gene            complement(1348..>1912)
                     /locus_tag="VHX39_01110"
     CDS             complement(1348..>1912)
                     /locus_tag="VHX39_01110"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEX3989747.1"
                     /translation="GRYRVELTRIRDLYVTLEDRVKLAQGLGANLVLSMHADEVSDAS
                     VRGASVYTLAKSASDTETAALADRENGLAPGKGGPGDHVPPEVSEILASLAARETRVA
                     SARIAHQLVRDFRRRLPVLASPERHANFVVLHAADIPSVLIEMGFLSNAEDEAALNDP
                     EHRALIARAMTRAVDAWFAAPRDEGFL"
BASE COUNT          326 a          629 c          606 g          351 t
ORIGIN      
        1 accgcgcacg gcctgaccgg acagccaacc gacgcgggcg tcgttgtcgg tcgtgttcaa
       61 cacgatccca aggcgccagg tcggcagcat gcccggtgtc cgtgccacct ttgccagcag
      121 ggtagcccaa tcggtatcca gggccgcact gtcgatgtgg gttaccggac cgcgccaacc
      181 tcccaggcgg tggtcatagg cgatcagccc atcacgcaac gccttgttcg cggcaacctg
      241 caacgccggg tccaggctgg tacgcacctg caatccgccc tcggtggcat tgtcgatgcc
      301 aaactgggcg atcaactggc gccgcacttc cccggcgaac cagtcggcgt cggaaacgac
      361 ctgcggatgc tggaacgcga ccgggacgat cggctcctgc ttgtattccg ccgcctgccc
      421 ggccgttatc acgccgtcct cggtcatccg gttcagcacc cgggcgcgtt gggcccgcgc
      481 cagatcgggg ttgcggaacg gattgtagtt gtttggcgcc ttcggcaatg cagcaaggaa
      541 cgcggcttcc ggcacggtca actgatcgag cggcttgttg aaatacgcct ccgacgcggc
      601 ggcgacgccg taagccccaa gtcccaggta aatctcgttg agatagagtt ccaggatctg
      661 gtttttcgac atcgtcttct cgatgcggaa cgccaggatg gcttccttgg ctttgcgggc
      721 gaaggtgacc tcgttgtcca gcagcatgtt cttggcgacc tgctgggtga tggtggaggc
      781 gccgaacggc cgtctgccgc ggtcatgttc cattaggttg gtggcggcgg ccctcaggat
      841 ggccagcggg tctacccctt tatggctgta gaagttcttg tcctcggccg agatgaaggc
      901 ctgctttaca atctgcggga tcgcgttgat cggcaggtaa attcgccgct cgttcgccag
      961 atcctccaac agctcgccat cgcttgcgaa cacccggctc atgacccgcg gctggtagcc
     1021 gcgcagcccg tcgacgtccg gcaatccggc cgcgaaatgc tgatagagca tccagccacc
     1081 ggcggcgccg gcgatgccgg ccgcccgaac aaggcccacc aatgcactca tcagcccgtg
     1141 gaacgctgag acgatccagt gtcgttgacg gcgtcgccgg cgtttcttct ttgccggcgg
     1201 ctcggtcggc ggtggcgcgg ccgaggcagg cgcagcccgg cgtcgcggcg gcaccagggg
     1261 ttcgccagct ctcaatggtt cgtccatgga gcccaaatat gggaaattcg ttaaaatggg
     1321 aaccgggttc tatcgaagtg gcttcgatca gaggaatccc tcgtcacgag gcgccgcaaa
     1381 ccaggcgtcc acggcgcgcg tcatcgcgcg ggcaatcagc gcgcgatgct cgggatcgtt
     1441 cagtgcggcc tcatcctccg cgttcgacag aaagcccatt tcaatcaaca cacttgggat
     1501 gtcggccgca tgcagcacga cgaaattcgc gtgccgctcc ggactggcca gcaccggcag
     1561 gcggcgcctg aaatcgcgca ccagctgatg ggcgatgcgg gccgaggcca ccctggtctc
     1621 gcgtgcggcc agacttgcta aaatctctga cacctccggt gggacatggt cgccaggtcc
     1681 gcccttgccc ggagcaaggc cattctcccg gtccgccagt gcggctgtct ccgtgtccga
     1741 tgcggacttt gccagggtgt agaccgaggc gccgcgcacc gaggcgtccg acacctcatc
     1801 ggcatgcatc gacagcacga ggtttgcgcc gagcccctga gccagcttca cccggtcctc
     1861 gagcgtgacg tacaggtccc ggatgcgcgt caattcgacg cgataccggc cg
//
LOCUS       DATAVD010000060         1658 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2611401, whole genome shotgun sequence.
ACCESSION   DATAVD010000060 DATAVD010000000
VERSION     DATAVD010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1658
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2611401"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..515
                     /locus_tag="VHX39_01115"
     CDS             <1..515
                     /locus_tag="VHX39_01115"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX3989748.1"
                     /translation="ITQITDMQQLFPKVNAKTDTELYSDLDATVAWAQSQGGNGNRLG
                     IMGFCRGGRTVWHYSTHNPNLKAGVAFYGSLIDKNDAAPKTSIELAPEVKEPVLGLYG
                     EEDTGIKPEQVKDMEAALKAAGKTAEFHEYPGAPHGFHADYRPSYRKEAAEDAWNRTA
                     GWFKKYGVLT"
     gene            580..1407
                     /locus_tag="VHX39_01120"
     CDS             580..1407
                     /locus_tag="VHX39_01120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3989749.1"
                     /translation="MPAFICNTCGTQFSASETEPPRCPICDEERQFVPPSGQSWTTHE
                     ALARRHFNCFRQHEPGLIGIGTVPAFAIGQRALLLKTDKGNVLWDCISLVDDATVAIV
                     RGLGGLIGIAISHPHYYGSMVEWAHAFDAPIHLHAADRQWVMRLDSAIEFWDGDALAL
                     ASGVTLIRCGGHFAGGTVLHWAQGGGGRGALLSGDIVQVIPDRNFVSFMRSYPNLIPM
                     SAPAVERIGTVLEPYAFDVIHGAWFDRTIPRNGKAIVQRSITRYAAAVRGDGSAELK"
     gene            1422..>1658
                     /locus_tag="VHX39_01125"
     CDS             1422..>1658
                     /locus_tag="VHX39_01125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989750.1"
                     /translation="MARIDEVKRENLNARQQQLHDDFLRSRPRNTLTGPFSVLIHAPD
                     IAEPADRLVNYYRQNPKLGRRLIELVILVAVRNAS"
BASE COUNT          322 a          524 c          511 g          301 t
ORIGIN      
        1 acatcaccca gatcaccgac atgcagcagc tctttccgaa ggtgaacgcc aagaccgaca
       61 ctgagctgta ttccgacctc gacgccacgg tggcgtgggc acagtcgcag ggcggcaacg
      121 gcaatcggct cgggatcatg ggtttctgcc gcggcggccg cacggtttgg cactattcga
      181 cgcacaatcc aaatcttaag gctggcgtcg cgttctacgg cagcctgatc gacaagaatg
      241 acgctgcgcc gaagacctcg atcgaactcg cacccgaggt gaaagagccc gtgcttggcc
      301 tgtacggcga agaagacacc ggtatcaagc ccgaacaggt caaggatatg gaggcagcac
      361 tcaaggccgc cggcaagacg gcagagtttc atgagtatcc gggcgcgccg cacggtttcc
      421 atgccgatta tcggccgagc taccgcaagg aggcggccga agacgcctgg aaccggacgg
      481 ccggctggtt caagaagtac ggtgttctga cctgatcgcg gggtagtcga gaccagcgcg
      541 gcgctttccg gcgccgcgat tttcgtgttg ggtacgccga tgccagcctt catttgcaat
      601 acctgcggaa cgcaattttc ggcctccgaa acggaaccgc cgcgctgccc gatctgcgac
      661 gaagaacgtc agttcgtgcc gccgtcgggt cagagttgga ccacgcacga ggcattggcg
      721 cggcgccatt tcaattgttt ccgccagcat gagcccggac tgatcggcat cggcacggta
      781 cccgcattcg ccatcggaca gcgcgccctg ctgctcaaga ccgacaaggg taacgtgctg
      841 tgggactgca tctcgttggt cgacgatgcc accgtcgcca tcgtcagagg cctcggcggc
      901 ctgatcggca tcgcgatctc acatccgcac tattatggct cgatggtcga atgggcgcat
      961 gccttcgatg cgccgatcca tctgcatgcc gccgaccggc agtgggttat gcggctggat
     1021 tccgcgatcg aattttggga cggcgatgca ctggcactgg cgagcggcgt cacactgatc
     1081 cgctgcggcg gtcattttgc gggcgggacg gtgctgcact gggcccaggg cggcggcgga
     1141 cgtggcgctc ttctctctgg cgacatcgtg caggtgatcc ccgaccggaa tttcgtgagt
     1201 ttcatgcgca gctatcccaa tctcatcccg atgtcggccc ccgcggtcga gcggatcggc
     1261 acggtgctgg agccttacgc gttcgacgtc atccacggcg cctggttcga ccgcaccatt
     1321 ccgcgaaacg gcaaagcgat cgtgcaacgc tcgattacgc gctatgcggc cgcggtgcgc
     1381 ggcgacggct cggcggaatt gaaataaccc aggagggccg catggctcgc attgacgaag
     1441 tcaaaagaga aaacctcaac gcacgccagc agcagcttca tgacgacttc ttgcggtcgc
     1501 ggccccgaaa taccctcacc gggccgttct ccgtcttaat ccacgcgccc gacatcgccg
     1561 agccggcaga ccggctggtc aattactacc ggcaaaatcc caagctcggc agacggctca
     1621 tcgaactggt catcctggtg gcggtccgta acgcttcc
//
LOCUS       DATAVD010000061         3607 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1122010, whole genome shotgun sequence.
ACCESSION   DATAVD010000061 DATAVD010000000
VERSION     DATAVD010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3607
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1122010"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..2119
                     /locus_tag="VHX39_01130"
     CDS             158..2119
                     /locus_tag="VHX39_01130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEX3989751.1"
                     /translation="MTKSRNGENPRSVALVGPQGSGKSTLFDALMEAAGAAVKRPADP
                     RNRPSTTSIRVGHCSYLDEAWSILDCPGSIEFAHEVHAALAMIDIAIVVAEPDPARAN
                     AIAPLLRALANEQVPHIVLINKIDTCDGSVGDVIAALQAYAGSPLVLRHMPLTEDGRI
                     GGYVDLMSERAYRYRKGQASELMRIPDSVVAEEAAERGRLVETLADRDDVLLEKVLED
                     IRPTPEELYLDMRKDLLAGAVIEVMLGAGEASHGVRRLWKALRHETPTAVETCERKAI
                     ATDGPPLAQVFRTEYAGHTGKLSYARIWRGEIKDGATLGGTRLGGIYHFVNGELSKSP
                     ACVIGDIVALGRLDGVPTGATVSPGSTPEQLPFPPAPTSVYALAVTTTDRKDDVRLSD
                     ALRKMAEEDPSLTVTQDHETGETVMHGQGEMHLLNAIEHMAKNYNLKMTTRRPSIAYR
                     ETIKAAVHEHGRLKRQTGGHGQFADVKIDIAPRERGSGFQFIDKVVGGSVPRNFIPVV
                     GESAEEAAKKGPFGYPVVDISVTLVDGGFHAVDSSDMAFRTATQIAMREGLAKADQVL
                     LEPIDHVTISVPNDLTPRAQRLLTGRRGQILGFGEREGWPGWDDVEALVPEAELHDLI
                     IDLRSQTQGLGTYRKRFDHLAETKAPAKA"
     gene            2285..>3607
                     /locus_tag="VHX39_01135"
     CDS             2285..>3607
                     /locus_tag="VHX39_01135"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3989752.1"
                     /translation="MAQTIEGFVGTSMDNARMSPIHYRVFALIAAGYFFDVADYVILG
                     SLIPDMVRPGGFATAPQIALVGSATLVGLFLGTLAQGEFTDRFGRKTVYQFNLLLYGT
                     ATVAAAFSPNYIWLAALRFIAGIGLGAEQPLCFAYAGEYAPKAIRGRFIAGVQLIGGA
                     FVWPITTLFALTFRDSLGWRGCWIVIGICALIVFVFRFSLPESPRWLATHGQGERALD
                     LLERMGLGRPAPGETLINDAASDTHSDPVGVVFRHYRRQVLAGMVCFVAFFGVALGLG
                     TWLPNMMAAQGMTVTKSLTYTLGMQMAFPTASLFMMFALERFGRKITATTAFVLAGVF
                     AVGFANAGTDTTILAVGFCMIFFIQLAGNSMQIFCSEVFPTNARASGFGIAQSAGRLA
                     TAFIIPGILWVQTGYGNAMVFICVAIALVVAAVAVNVIAPETRGLSLDE"
BASE COUNT          625 a         1135 c         1164 g          683 t
ORIGIN      
        1 ctgacccaac caagacctga taacccggac acaaaactgt catagggact cgcatggcgt
       61 cgatttggcg ctaaactcct gccgggcgct ccaggtgccc acgagatttg ggtcgcaatc
      121 ctgggcagcg ccttcgataa atgaaggagg tgcggccatg accaaaagca gaaacggcga
      181 aaatcctcga tccgtggcgc tcgtgggacc gcagggaagc ggcaagtcta ccctgttcga
      241 tgcgttgatg gaggcggcgg gcgccgccgt gaaacgtcct gccgatcccc gcaaccggcc
      301 ctcgaccacg tccatccggg tcggacattg cagctatttg gatgaggcct ggtcgatcct
      361 cgattgtccc ggttcgatcg agttcgccca tgaggtgcat gccgcgctgg ccatgatcga
      421 catcgccatc gtcgtggccg agcccgaccc ggcgcgggcc aacgccattg caccgctgct
      481 ccgcgcgctc gccaacgagc aggtgccgca catcgtgctg atcaacaaaa tcgacacctg
      541 cgacggctcg gtcggcgatg tcattgctgc actgcaggcc tatgccggct caccgctggt
      601 gctgcgccac atgccgctca ccgaggacgg ccgcatcggc ggttacgtcg atctgatgag
      661 cgagcgcgct taccgctacc gcaagggcca ggcgtcggaa ctgatgcgca ttccggactc
      721 cgtcgtcgcc gaggaagctg ccgaacgcgg ccggctggtt gagacgttgg ccgatcgtga
      781 cgatgtgcta ctggaaaaag tgctggagga cattcgcccg acgccggagg aactgtacct
      841 cgatatgcgc aaggacctgc tggccggcgc ggtgatcgag gtcatgctgg gcgcgggcga
      901 ggccagccat ggcgtgcgcc gcctgtggaa agcgctgcgc cacgagacgc cgaccgccgt
      961 cgagacctgc gagcggaaag ccattgccac cgacggaccg ccgctggccc aggtgtttcg
     1021 gacggaatat gccgggcaca ccggcaaatt gtcgtatgcc cggatctggc gcggcgaaat
     1081 caaggatggc gccacgctgg gtggcaccag gcttggcggg atctaccatt tcgtcaacgg
     1141 cgagttgtcc aaatctcccg cctgcgttat cggcgacatc gtcgcattgg gccggctgga
     1201 cggtgtgccg accggcgcga ccgtttcgcc gggcagcacg ccggagcaat tgccgttccc
     1261 gcccgcgccg acctcggttt acgctttggc cgtcaccacc accgatcgca aggacgacgt
     1321 ccggctgtcg gatgctctgc gcaaaatggc cgaggaagac ccgtcgctga ccgtgaccca
     1381 ggaccacgaa accggcgaaa ccgtcatgca cggccagggt gagatgcacc tgctgaacgc
     1441 catcgagcac atggcgaaga actacaacct gaaaatgacc acccgccgcc cgtcgatcgc
     1501 gtaccgggaa accatcaagg ccgcggttca tgaacatggc cgactgaaga ggcagaccgg
     1561 cgggcacggt cagttcgctg acgtgaagat cgatatcgcg ccgagggaac gtggctccgg
     1621 gttccagttc atcgataaag tggttggcgg ttcggtgcct cgtaatttca ttcccgtggt
     1681 cggcgagtcc gccgaggaag ccgccaaaaa gggacctttc gggtatccgg tggtcgacat
     1741 ctccgtcacg ctggtcgatg gcgggtttca cgctgtcgac agctcggata tggcgtttcg
     1801 caccgccacg cagattgcca tgcgcgaggg actggcgaag gccgaccagg tgctgctgga
     1861 gccgatcgat catgtgacga tcagcgtgcc gaacgatctg acgcctcggg cgcaacgatt
     1921 gctgaccggg cggcggggtc agatcctcgg gtttggcgaa cgcgagggct ggcctggctg
     1981 ggatgacgtc gaggcgctgg tgcccgaagc cgaattgcac gacctgatca tcgatctgcg
     2041 gtcgcaaacg cagggcctgg gaacctatcg caagcggttc gaccatctgg ccgaaaccaa
     2101 ggcgccggcg aaggcgtagc atagcgcctg cgtcccggcc tggcagccgc ctgggtggca
     2161 ccttggtgct tcccaggcca ttgcgaatgc tttgcgtggt gaccactccc gattgacggc
     2221 tcccggtctg cgtgggacgc tgatcctaaa gccgcagaac ggcgcaaggg ggagaaaaca
     2281 ccgcatggct cagaccatcg agggcttcgt cggcacgtcc atggacaatg ccaggatgag
     2341 cccgatccat taccgcgtct tcgcgctcat cgctgcaggc tatttctttg acgtggccga
     2401 ttacgtcatt ctcggctcgc tgatcccgga catggtacgt ccaggggggt ttgccacggc
     2461 gccgcagatt gctttggtgg gcagtgccac gttggttggc ctgttcctgg gcaccctggc
     2521 gcagggcgag ttcaccgacc ggtttggccg caagacggtc taccagttca acctgctgct
     2581 atacggcacc gcaacggtcg ccgcggcttt ctcgcccaac tacatttggc ttgccgcgct
     2641 gcgcttcatt gccggcatcg gattgggtgc ggaacaaccg ctgtgcttcg cgtacgccgg
     2701 agaatacgcg ccgaaagcca tccgcggccg tttcatcgct ggcgtgcaac tgatcggcgg
     2761 cgctttcgtc tggccaatca ccaccttgtt tgcgctgacg tttcgcgatt ccctcggctg
     2821 gcgcggctgc tggatcgtca tcggcatctg cgcgctgatc gtcttcgtgt tccgtttctc
     2881 gctgccggag tcgccgcgct ggctggcgac gcacggccag ggcgaacgcg ccctcgacct
     2941 gttggaacgc atgggactgg gccgtcctgc cccgggtgag acactgatta acgatgcagc
     3001 cagcgacacc cacagcgatc cggtcggcgt ggtgttccgg cactaccgcc gccaggtgct
     3061 ggccggcatg gtgtgtttcg tcgcgttctt cggtgtggcg cttggcctcg gcacctggct
     3121 gccgaacatg atggccgcgc agggcatgac ggtcaccaaa tcgctgacct acaccttggg
     3181 catgcagatg gcgtttccca ccgccagcct gttcatgatg ttcgcgctgg agcggttcgg
     3241 ccggaaaatc accgcgacga ccgccttcgt gctggccggc gtgtttgcgg tcggcttcgc
     3301 caatgccggc accgatacga ccattctggc agtcggcttc tgcatgattt tcttcatcca
     3361 gttggccggc aactcgatgc agatcttttg ttccgaggtg tttccgacca acgcccgcgc
     3421 ctcggggttc ggcatcgcgc agagtgccgg acgattggcc accgcattca tcatcccggg
     3481 cattctttgg gtgcagaccg gctatggcaa cgcgatggtg ttcatttgcg tcgccattgc
     3541 tctggtggtt gccgcggtgg cggtgaacgt gatcgcgccg gaaacccgtg gcctgtcgct
     3601 ggacgag
//
LOCUS       DATAVD010000062         1551 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2797231, whole genome shotgun sequence.
ACCESSION   DATAVD010000062 DATAVD010000000
VERSION     DATAVD010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2797231"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(684..1058)
                     /locus_tag="VHX39_01140"
     CDS             complement(684..1058)
                     /locus_tag="VHX39_01140"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX3989753.1"
                     /translation="MSDTKIIADREAELYEAMIAFDYPVLDAILSDEVSYIHSTAVVE
                     TKADYFAGLRSGLYEYGAIDIRSGSTRMFEGIAMTTGVMDMLVGANGSTKGMIRLQHV
                     LVWRLEAGTWRLLLRQATRIPA"
     gene            complement(1203..>1551)
                     /locus_tag="VHX39_01145"
     CDS             complement(1203..>1551)
                     /locus_tag="VHX39_01145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989754.1"
                     /translation="IPRMWGHYRAEADQIYPGQARLGANGVPTRLALWRFSGVPGASV
                     QAVVDGVRTSFADTPGVQQVRVFEAKAKQTGDVIATIELAGPVALPAPTADAFGDTLR
                     WLNLSNVYTPYWR"
BASE COUNT          308 a          501 c          468 g          274 t
ORIGIN      
        1 cgaaccgctg gcgatctcac caaagccgat caggccctgg tcggttcgga cctcgaccag
       61 aacgagtcgc gcgcggccga aacgttcgtg tgcggtccag accggctttg gatagtcggc
      121 ggccaaggga tgggcgacga tttcggtgat cttcatgggg acgcgacctt cgctgcgatg
      181 gagcggggta ggctggggtg acgaccaggt cggcggctcg ggatagttcg ccgcatagca
      241 tgcacagcat agtctcaaac gcgtgcgcga caagacgttg ccgcggatct tgggctgttt
      301 gccgtgacgc atggttcgca cgtcttttgc aaccttgtat gattaccatg ccgtatgagt
      361 aagcggtaac aacatacgac aacgaaacca aggccacgac acggccgggc cctattgcgc
      421 caagtcgcca tcaagagcgg agccatagcg gtgatcgcgc tggaacacct ggactaacgc
      481 gcgcccaccc gattgttctt ggaagctacc ggacgactgg gaccagaaag acgtcggtga
      541 cgtcgcggtt caatcgaggt ggagcgaacc gattttcaaa cccccgacgc cacggcggcg
      601 ttgcccaatg aagaaaagct gctgtcccgc tgcgacgtca gccgcaccgt tctgcggaag
      661 ccggcgcgta aaccgtgcaa accttacgcc ggtatccgcg ttgcctgccg cagcagcaac
      721 cgccacgttc cggcttccag ccgccagacc agcacgtgtt gcagccggat catgcccttc
      781 gtcgaaccat tggcgcccac aagcatgtcc atgacgccgg tggtcattgc gatgccctca
      841 aacatgcgcg tgctgccgct tcggatatcg atcgcgccgt attcgtacaa gccgcttcgc
      901 aggccggcga aatagtcggc cttcgtttcg accacggcgg tggagtggat atagctgacc
      961 tcgtccgaca ggatcgcatc cagcaccgga tagtcgaagg caatcatcgc ctcgtataat
     1021 tcggcctcgc ggtcggcaat gattttcgtg tctgacatga tgcatgctcc ccaggatgat
     1081 tgcggtgcca atccgacggc gcaagttcac cgaagatccc cacggcgaca acgatgtcgg
     1141 gaacggcgtc cacgccccga aggcggccaa agtccgttac gacatcggtc cgccgcatcg
     1201 gttcagcgcc agtagggcgt gtagacgttg ctcagattca gccaccgcaa cgtgtcgccg
     1261 aatgcatcgg ccgtcggcgc gggcagcgcc accggaccgg ccagttcgat cgttgcgatc
     1321 acatcgccgg tctgcttagc cttggcctcg aacacccgaa cctgctgcac gcccggtgta
     1381 tcggcgaaac tcgtcctcac cccatcgaca actgcttgga cggacgcccc cggcacgccg
     1441 gagaaccgcc acagcgccag ccgggtaggc accccgttgg caccgaggcg cgcctggccc
     1501 ggatagatct ggtcggcctc ggcgcgataa tgcccccaca tccgcggaat g
//
LOCUS       DATAVD010000063         3652 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_751326, whole genome shotgun sequence.
ACCESSION   DATAVD010000063 DATAVD010000000
VERSION     DATAVD010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3652
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_751326"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..113
                     /locus_tag="VHX39_01150"
     CDS             <1..113
                     /locus_tag="VHX39_01150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3989755.1"
                     /translation="RCANVCFGGRKLNRLFMAASQSIYALYVETQGAPGG"
     gene            complement(92..742)
                     /locus_tag="VHX39_01155"
     CDS             complement(92..742)
                     /locus_tag="VHX39_01155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEX3989756.1"
                     /translation="MTAGLLFASAVAGGAYTLAPGPAFLALLGIGAGSGRRAGAWFLA
                     GHFAGDISWAALALIAIIGAKTIGTTIFSVLDLICGAYLCWLGYRAVTTQRQTDGTVA
                     FVPRHPVRRGFAFGLSNPKAYPVAIAMFTALLADHAAALDWTALPSLLGAACVGFVTA
                     DVILVTIIGAGPVRRWYRRHALWVTRASGVIFLGFGLQAIVSARNLVLPVQPPGAP"
     gene            complement(739..1626)
                     /locus_tag="VHX39_01160"
     CDS             complement(739..1626)
                     /locus_tag="VHX39_01160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3989757.1"
                     /translation="MIQIPTGQIPGFYHRRIGDIVVTALSDGYLDGTVEVLQNITRDD
                     AQGMLDAQFRPGRRTSVNCYLIWSAGRLALVETGSGDYLLPTAGKLQQNLKAAGVDPA
                     DIDTVVLTHMHPDHSAGLTDPKTGRKFFPNAELVVHENEPRHWRDDGAMSRASERAKK
                     LYFQCAREQIAPYHNVTRTFARAEEVFPGVTSVPLHGHTPGHSGYMVSSGKDSLLIWG
                     DIIHVPEIQVPRPEVTIEFDTDPHQAAATRKRIFDMVVTDRQLIAGMHVHFPGFAHLV
                     RDGDGYRMVPELWDQAFGG"
     gene            complement(1649..2362)
                     /locus_tag="VHX39_01165"
     CDS             complement(1649..2362)
                     /locus_tag="VHX39_01165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008892048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3989758.1"
                     /translation="MIDLYYWPTPNGWKISIMLEETGLPYTLCPVNIGAGDQFKPDFL
                     EISPNARMPAIVDHDTQDGPMPIFESGPILIHLAEKSGKFMPASRRGRKECLEWLFWQ
                     VGNLGPMAGQLSHFVNYAKGVDGQADHGYTHKRYAGEYNRCLGVLERRLEGREYILDE
                     YSIADMISWPWVFISKPLGQPLDEFPNVSRWRDAIKARPAVQKGVDVGKDLRRRGDHS
                     EESRKILFGQTAKSLSGTA"
     gene            complement(2359..3543)
                     /locus_tag="VHX39_01170"
     CDS             complement(2359..3543)
                     /locus_tag="VHX39_01170"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3989759.1"
                     /translation="MPGPLHGYRIVDLTSNVSGPLATMILADQGADVIKVENPDGGDA
                     TRSASNRRNGLSASFLNTNRNKRSIALDLRDPAAKQALMRLIATADVFIQNFRPGVVE
                     RMGFGEPALREVKPDIVYVSISGFGETGPYAGKPVYDPIVQAMSGLATIQAGSDTERP
                     RLMRTILPDKLTAVTASQAITAALLARERTGQGQHVRLAMLDAVIAFLWASDMGSQTF
                     ADDEPSRQEAASRIDLIYATATDYITAAVQTDRQWLGLTRALEKPEWLEDPRFRTPAL
                     RQENVDDRLALTQAVLQTRAAAEWLEVLTREDVPCAPVLTRSALLRHPQIQANGIVVE
                     TEHEKAGLLRQARPAARFSVTPAAIRHGAPVLGQDNDTILSELGYSAAEIAALRTKEH
                     AA"
BASE COUNT          706 a         1125 c         1122 g          699 t
ORIGIN      
        1 agcgctgtgc caatgtttgt ttcggcggcc gcaagctcaa ccgattgttc atggcggcaa
       61 gtcagtcgat ctatgcgctg tatgttgaaa ctcaaggtgc tccgggcggt tgaacgggca
      121 gcaccaggtt tctggctgac acgatcgcct gcaggccgaa gccaaggaaa ataacgccgg
      181 acgcgcgcgt gacccaaagc gcgtgccggc gataccagcg gcggaccggg ccggcgccga
      241 tgatcgtgac cagaatgaca tcggccgtga cgaatccgac gcaggcggcg ccaagcaagg
      301 atggcagcgc ggtccagtcc agtgcagcgg catggtcagc cagcaacgcg gtaaacattg
      361 cgattgcgac cggatacgct tttgggtttg acagtccgaa ggcgaaccct cggcgcaccg
      421 gatgacgtgg aacgaacgcg accgtcccgt ccgtttgccg ctgcgtggtg accgcacgat
      481 agccaagcca gcaaagatac gcgccgcaaa tcagatcgag cacgctgaag attgtcgtgc
      541 cgatcgtttt ggccccgatg atcgcgatga gtgccagagc cgcccaggag atgtcgccgg
      601 cgaaatgtcc ggcaagaaac cacgcgccgg cgcgccgtcc actgccggcg ccaatcccga
      661 gcaacgcgag aaatgccggg cccggcgcca gtgtataggc tccgcctgcg acggcggacg
      721 cgaacagcaa gccggccgtc aaccgccgaa cgcctgatcc cacaactccg ggaccatgcg
      781 atagccatcg ccgtcgcgca cgaggtgcgc aaatccggga aaatgcacgt gcataccggc
      841 aatcaactga cgatcggtga cgaccatgtc gaatatgcgt ttgcgggttg cagcggcctg
      901 atgcggatcg gtatcgaact cgatggtgac ttcggggcgc ggcacctgaa tttcgggcac
      961 gtggataata tcgccccaga tcagcaacga atccttgccg gaactgacca tgtatccgct
     1021 gtgtcccggt gtgtggccat gcagcggcac cgaggtgacg ccgggaaaca cctcctcggc
     1081 gcgggcgaag gtgcgggtga cattgtgata gggcgcgatt tgctcgcggg cacactggaa
     1141 atacagtttc ttcgcccgct cgctggcgcg actcatggcg ccgtcatcgc gccagtgtct
     1201 cggttcgttt tcgtgcacga cgagttcggc gttgggaaag aatttgcggc cggttttcgg
     1261 gtcggtcagc ccggcagagt ggtccggatg catatgggtc aagaccacgg tatcgatgtc
     1321 ggccggatcg accccggcgg cctttaaatt ctgttgcagc ttgccggccg tcggcaacag
     1381 gtagtctcct gaccctgtct cgaccagcgc aagccggccg gcggaccaga tcaaatagca
     1441 gttgactgac gtgcgccggc ctggccggaa ctgagcatcc aacatgcctt gcgcatcatc
     1501 tcgcgtaatg ttctgcaaaa cctccacagt gccatccaga tagccgtccg acagtgcagt
     1561 cacaacgatg tcgccaatgc ggcggtggta gaagccgggg atttgtccgg tggggatctg
     1621 gatcatgctg caggctcctt ggtgaccgtc acgctgtgcc gctgagtgat tttgcggtct
     1681 ggccgaacag gatctttcgc gattcctcgg agtgatcacc gcgccggcgc aaatccttgc
     1741 cgacatcgac tcctttttgc accgccggcc tggccttgat cgcgtcgcgc caacgggaaa
     1801 cgttggggaa ttcgtccaat ggctgaccga gtggcttcga aatgaacacc cagggccagg
     1861 aaatcatgtc ggcgatcgaa tactcgtcca ggatgtattc tcggccctcg agccgccgtt
     1921 ccaatacccc caggcaacga ttgtactcgc cggcataacg cttatgtgtg tagccgtgat
     1981 ctgcctgacc gtcgacgccc ttggcgtaat tgacgaaatg actaagctgg cccgccatcg
     2041 gaccaagatt gccgacctgc cagaacagcc attcgagaca ctctttgcgg ccacgccgcg
     2101 aggccggcat gaattttccg gacttctcgg caaggtggat caggatcggt cctgactcga
     2161 atatcggcat tgggccgtct tgcgtgtcat gatcgacgat cgccggcatg cgggcgtttg
     2221 gactgatctc caggaagtct ggtttgaact gatcgccggc gccgatattc actggacaca
     2281 gtgtgtacgg caggccggtt tcctccagca tgatggagat tttccacccg ttgggggttg
     2341 gccagtaata caagtcgatc atgctgcgtg ctcctttgtc cgcagggccg cgatctcggc
     2401 ggccgagtag cccagttcgg acaggattgt gtcgttgtcc tggccgagga ccggggcacc
     2461 gtgacggatt gcggctgggg taaccgaaaa ccgggcggcg ggccgtgcct ggcgcaaaag
     2521 tccggccttc tcatgctccg tttcgacaac gatgccattt gcctggatct gcggatgacg
     2581 gagcagtgcc gaccgggtca ggacgggcgc gcaaggcacg tcctcacggg tcagaacctc
     2641 cagccattcc gctgccgcac gtgtctgcag caccgcctgg gtcagcgcca gccggtcgtc
     2701 gacgttctcc tgccgtaacg ccggcgtccg gaagcgggga tcttccagcc actccggttt
     2761 ctccagagct cgcgtcaggc ccagccactg ccggtcggtc tgcacagcgg ccgtaatgta
     2821 gtcggtcgcg gttgcataga tcaggtcaat gcggcttgcg gcctcctgcc gagacggttc
     2881 gtcatcggca aacgtctggc tgcccatgtc ggatgcccac aaaaatgcaa tgaccgcatc
     2941 caacatcgcc aatcgcacgt gctgaccttg acccgtgcgt tcccgcgcga gcagcgccgc
     3001 ggtgattgcc tgcgatgcgg tgaccgccgt caacttgtcc ggcagaatgg tgcgcatcag
     3061 ccgaggacgt tccgtatccg aaccggcctg tatcgttgcc aatccggaca tggcctgcac
     3121 gattggatcg tagaccggct tgccggcgta aggcccggtc tcgccgaaac cggaaatcga
     3181 gacatacacg atatccggct tcacctcgcg caaagccggt tcgccaaagc ccattcgctc
     3241 caccacacct ggccggaaat tctggatgaa cacatccgct gttgcgatca gccgcatcag
     3301 cgcctgtttt gccgcgggat cacgcaggtc cagagcaatg gagcgtttgt tgcggttggt
     3361 gtttaaaaac gacgccgaca ggccgttgcg ccggttactc gccgaacgcg tggcgtcgcc
     3421 gccatcgggg ttctctacct tgattacatc cgcgccctgg tccgccaaaa tcatcgtggc
     3481 caaaggccca gagacattgg aggtcaggtc gacgatgcgg taaccgtgta agggacctgg
     3541 catattggct tttcccactc agaatacgcc gaccatacgt caccgcggcg cggtcgccaa
     3601 aacctccacg ttgccggtgc ccaaccttgg cgccgcgctc cgaatgaccg gc
//
LOCUS       DATAVD010000064         3919 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1681405, whole genome shotgun sequence.
ACCESSION   DATAVD010000064 DATAVD010000000
VERSION     DATAVD010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3919
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1681405"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..763)
                     /locus_tag="VHX39_01175"
     CDS             complement(<1..763)
                     /locus_tag="VHX39_01175"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3989760.1"
                     /translation="MTCDPKAFGILSRRTVLAATGALALPHIARAADALSVKLDFLPW
                     GLHAGMHLANVNGWFKDAGLEVDAQDGRGSANTLQLVNAGQFDVGQIQVGLLSQAAAN
                     GARLKAFAGFMRGTDLAVLVPTESPMTKVTDFRGKSIDVFAASPWAPFVDLWLKSGGL
                     SRDTVTMMFVDPSALFGTYTSGRADGLMSVLGAALPVAQKARPSRAIMASDAGIHFPS
                     YGLVATDTVLQSKHDALRRLVQVQQRVWTWLKGGHL"
     gene            complement(955..2322)
                     /locus_tag="VHX39_01180"
     CDS             complement(955..2322)
                     /locus_tag="VHX39_01180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004273694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3989761.1"
                     /translation="MTTHVRCGTLFVGDETATRTDATLGVSDDGRIAFVCDMADAPPV
                     SLHDTVLDYSDLFVMPGLLDVHTHLAYGNAKSEEDIDLYQPMEFRALRALFFAQKVVA
                     AGYTSICAPGDAGQISLSVRNAINFGLFDGPRVTAAGRYLTTRQGLTDWYPTWIGVPD
                     TSIGRLVTNKDEAIEEIRVQVKNGVDCIKLAMDGVQTRDDGSLVAAFNQDETTSMVTE
                     VHRLGKRVVAHAMGREAILYSARAGIDLIFHANRVDDECIDAMLKTGSAIGPTLTFQR
                     NIADFTQPHEPAALRGRPSAVDREYAISCENLRKARAAGIPMMTGTDTGFAVTPYGEW
                     HAMELEIFVRDLGFTPAEALRCATSVTARFMANGSRIGMLEDGRFADFIAVDGSPLEN
                     ISILQDKSRIRHVFIGGKRMQIPERGYDPRQVTDRSMVNWTDLYTQERVRELYPARRR
                     LAAAE"
     gene            complement(2425..>3919)
                     /locus_tag="VHX39_01185"
     CDS             complement(2425..>3919)
                     /locus_tag="VHX39_01185"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3989762.1"
                     /translation="SDLPTVTGIPNNGGEGFRFLGFPAYDGLVNWDYTHVDQTSDPTP
                     GLFESWTVDPENPTRWIFTLRQGVTFHDGSALTMDDIVWNLRRVWDKDSPQYDAPAAP
                     IVRATVTMLDRWEKIDDGKIAIYTKAPFSFFHYLLTVVLIVSPRQWEKMGSSWVGFAK
                     SPAGTGPFKITRVVPGQYAEMTRNENYWNKARIPKLERMIVYPMPEATTRLAALRSGQ
                     VDWIEVPPPDSIPSLREAGFAISLWPYPHTYPYVLNCAPGLVFSDVRVRQAMNFAIDR
                     DGLCQMLNGTAKPAVGFYPPESPFFGTPKLRYGYDPDRARDLLRQAGYGPGKHAKAKI
                     MISTSGSGQMVPIPINEFLQQNFAAVGIDVEFDVVEWGMMIMARRSAPSQQTSHGDDG
                     INNSLGYTDPSTMYRLFASASFPPAGTNWGHFSNAHFDELAIRAQSTFDVAEQVKLLA
                     EAHATLVDEAAWLFICHDLNPRAMSKRVQNFHPAQCWSQDFTHITMT"
BASE COUNT          744 a         1182 c         1214 g          779 t
ORIGIN      
        1 cgagatgacc gcccttcagc caggtccaga cccgctgctg cacctgaacc agtcggcgca
       61 aggcatcatg tttcgattgc aacacggtat cggtagcgac gagaccgtag ctggggaaat
      121 ggatgcctgc atcgctcgcc atgatggcgc gcgaggggcg ggccttttgc gcgaccggca
      181 atgcggcacc caataccgac atcagaccgt cggcgcggcc cgaagtgtag gtgccgaaca
      241 aggccgaggg atcgacgaac atcatggtca cggtgtctcg gctgagcccg ccggatttca
      301 gccaaagatc gacgaaggga gcccatggcg aggcggcgaa aacgtcaatg ctcttgccgc
      361 ggaagtcggt aactttggtc atcgggcttt cggtcggcac cagcacggca aggtcggtgc
      421 cgcgcatgaa cccggcgaac gctttcaggc gcgctccgtt ggcggctgcc tgggacagca
      481 gtccgacctg gatctggccg acatcgaatt gtcccgcatt caccaattgc agcgtattcg
      541 ctgagcccct cccatcctgg gcgtcgacct ccaggccggc gtccttgaac cagccgttga
      601 cgttggcgag atgcatgccg gcatgcaaac cccacggcag aaagtcgagt tttaccgaca
      661 atgcatcggc ggcgcgagcg atgtgcggca gtgcaagggc accggtggct gcgagcacgg
      721 tgcggcggga aaggatgccg aatgctttgg gatcacacgt cacgctgccc tccttgaggt
      781 tgagctgcga tccggcgttc ccatgccgct gcggatgctg cgcgatccgc ttatcgggtt
      841 aggtagcgaa gtccccggcc taggggtgtg tcaatagggc agcgcgcggt ttgcccgatt
      901 ccaatttgta cccggaaggt tccggaaccg atgcaaacgt tcgggttggc ggccctattc
      961 cgctgccgcc aggcgccggc gcgccggata caattcacgc actcgttcct gcgtgtagag
     1021 atcggtccag ttgaccatgc tgcggtcggt gacctgcctc gggtcgtagc cccgctccgg
     1081 gatttgcatc cgtttgccac cgatgaacac gtggcggatc cggcttttgt cttgcaatat
     1141 cgagatattc tccaacggcg agccgtccac cgcgatgaaa tcggcgaacc ggccatcttc
     1201 cagcatgccg atccggctgc cgttcgccat gaaccgcgcg gtgaccgagg ttgcgcaacg
     1261 caacgcctcg gctggggtaa agcccaggtc gcgcacgaat atctcgagtt ccatggcgtg
     1321 ccactcgccg tagggtgtca ccgcgaagcc ggtatcggtg ccggtcatca tcggaatgcc
     1381 ggcggcgcga gccttgcgca ggttctcgca ggagatggcg tattcgcggt cgacggcaga
     1441 ggggcgtcct cgtagcgcgg ccggctcgtg cggctgggta aagtcggcga tgttgcgttg
     1501 aaaggtcagg gtggggccga tcgcgctccc ggttttcagc atcgcatcga tgcactcgtc
     1561 atcgacgcgg ttggcatgga agatcagatc gatgccggca cgtgcggaat acaggatcgc
     1621 ttcgcggccc atcgcatgcg ccacgacccg tttgccgaga cgatgcactt cggtaaccat
     1681 gctggtggtt tcgtcctggt tgaatgccgc gaccaatgaa ccgtcgtctc gggtctgtac
     1741 gccgtccatc gcgagtttga tgcaatcgac gccgttcttg acctggacac ggatttcctc
     1801 gatcgcctcg tccttgttgg tcaccagccg gccgatcgag gtgtcgggca cgccgatcca
     1861 ggtcggatac caatcggtca gcccttgccg cgtggtcagg taacggcccg ctgcggtcac
     1921 gcgcggcccg tcgaacagac cgaaattgat cgcattgcgc accgacaggc tgatctggcc
     1981 ggcatcgcca ggcgcgcaaa tcgaggtgta accggcggca accaccttct gggcaaagaa
     2041 aagcgcccgc agcgcacgaa attccattgg ctgataaagg tcgatgtctt cctcgctttt
     2101 ggcattgccg taagcgagat gcgtgtgcac atcgagcagg cccggcatca cgaacaggtc
     2161 ggaataatcc agcaccgtat cgtgcaggct caccggcggc gcgtcggcca tatcgcacac
     2221 gaaggcgatc cggccgtcgt cgctgacgcc aagggtggca tcggtccgcg ttgcggtttc
     2281 gtcgccgaca aacaacgtgc cgcatcgcac atgtgtggtc atggtccgtc tcccggttca
     2341 gccctgagcg gcgcacgata cgacggtgca tcgcatcttg ccagccatgg cgtgtactgg
     2401 acgcctcccg catgcggaac gaggtcacgt catcgtaatg tgggtgaaat cctgcgacca
     2461 gcattgtgcc gggtgaaagt tttgtacgcg tttgctcatc gcccgcggat tgaggtcatg
     2521 gcagatgaac aaccatgccg cctcatcgac cagggtggca tgtgcctcgg ccagcagttt
     2581 cacttgctcg gccacgtcga acgtcgactg tgcgcggatc gccagttcgt cgaagtgcgc
     2641 attgctgaaa tggccccagt tcgtgccggc cgggggaaag cttgcactgg cgaacagccg
     2701 gtacatggtc gatggatcgg tatagcccag actgttgttg atcccatcat ccccgtgcga
     2761 ggtctgctga ctgggtgcac tgcgccgcgc catgatcatc atgccccatt cgacgacatc
     2821 gaactcgacg tcgattccga ccgccgcgaa gttttgttgc aggaattcat tgatcggaat
     2881 tggcaccatc tgtccagagc ctgaggtgga aatcatgatt ttcgctttgg catgtttgcc
     2941 gggtccgtat ccggcctgac gcagcaggtc gcgcgcgcgg tccggatcgt agccgtaacg
     3001 cagcttcggt gtgccgaaaa acgggctctc cggcgggtaa aacccgacag ccggtttcgc
     3061 cgtgccgttc agcatctggc aaagcccatc ccggtcgatg gcaaaattca ttgcctgacg
     3121 gacccgcacg tcgctgaata ccagacccgg cgcgcaattg agtacgtaag gataagtatg
     3181 tgggtacggc cataggctga tggcaaatcc ggcctcacgc agcgagggga tggagtccgg
     3241 cggcggcacc tcgatccaat ccacctgacc cgagcgcagt gcggcgagcc gggtggtcgc
     3301 ttccggcatc ggataaacga tcatgcgttc caacttcgga atgcgtgctt tgttccagta
     3361 gttttcgtta cgggtcattt cggcgtactg accgggaacg acgcgggtaa ttttgaacgg
     3421 tccggttccg gcgggggatt tcgcaaagcc aacccacgag ctgcccattt tctcccattg
     3481 cctggggctg acgatcagca cgacggtcag cagataatgg aaaaagctga acggcgcctt
     3541 ggtatagatc gcaatcttgc cgtcatcgat tttttcccac cgatccagca ttgtcaccgt
     3601 cgcccgaacg atcggtgccg cgggtgcgtc gtattgcggc gagtccttgt cccaaacgcg
     3661 ccgcaaattc caaacaatat cgtccatcgt cagtgccgag ccgtcgtgaa acgtcacgcc
     3721 ttgccgaagg gtaaaaatcc atcgcgtcgg attttccgga tcgaccgtcc acgactcgaa
     3781 caggcccggg gtcggatcgg acgtttgatc gacatgggtg taatcccagt tcaccaggcc
     3841 gtcgtacgcc ggaaaaccga ggaaacgaaa tccttcgccg ccattgttgg gaatcccggt
     3901 gaccgtcggc aaatccgac
//
LOCUS       DATAVD010000065         1711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_751410, whole genome shotgun sequence.
ACCESSION   DATAVD010000065 DATAVD010000000
VERSION     DATAVD010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_751410"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..597)
                     /locus_tag="VHX39_01190"
     CDS             complement(<1..597)
                     /locus_tag="VHX39_01190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010667955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEX3989763.1"
                     /translation="MAVLVLLEFDASGIKQPSRSAVAAAQALGEVHGLVAGAGLADAA
                     AAAAKLAGVAKVLTADSPVLDHLLAEPVAALLVALAPGYSHILAATTAVGKNILPRVA
                     ALLDVQPISDIAAVVDADTFVRPIYAGNGMATVKSSDGKKVITVRAASFDPVAAEGGS
                     ASIEAVPPGDLPGLSKFVSAELSKSERPELTAARVVISG"
     gene            complement(600..1349)
                     /locus_tag="VHX39_01195"
     CDS             complement(600..1349)
                     /locus_tag="VHX39_01195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEX3989764.1"
                     /translation="MKVLVPVKRVVDYNVKVRVKTDNTGIETSGVKMSMNPFDEIAVE
                     EAVRLKEKGVATEIVAISMGVPQCAETIRTALAMGADRGILVETDVDLQPLAVAKLLK
                     AIADQEQPKLIILGKQAIDDDMSATGPMLAALLGWSQGTFASKLAVDGDVITVTREVD
                     GGLETVALNLPSIITTDLRLNEPRYASLPNIMKARKKTIDNKKPADFGVDPTPRLTVV
                     RVDEPPKRKAGQKVGSVAELVSKLKTEAKVI"
BASE COUNT          303 a          553 c          527 g          328 t
ORIGIN      
        1 accagaaatg acaacccggg cagcggtcag ctccggccgc tcactcttag atagttcggc
       61 ggagacgaat ttggagaggc cgggcaggtc gccaggcgga acggcttcaa tcgaggcgga
      121 cccgccttcg gccgcgaccg ggtcgaaact ggcagcgcgg accgtgatga ccttcttgcc
      181 gtcggacgac ttcaccgttg ccatgccgtt gccggcgtag atcgggcgca cgaaggtgtc
      241 ggcgtcgacc acggcggcga tgtcactgat cggctgcaca tccagcaacg ccgcgacccg
      301 cggcaggatg tttttgccga ccgccgtggt cgcggccagg atgtgcgaat acccaggcgc
      361 caaagccacc agcaatgcgg cgacaggttc ggccaacaaa tgatccagaa ccggcgaatc
      421 agcggtcagg actttggcca ctcccgctaa cttcgcggcc gccgcggcgg catccgccaa
      481 ccccgcgcct gccaccaacc catgcacttc gcccaacgcc tgggctgcgg cgactgccga
      541 gcgggatggc tgcttaatgc cggacgcgtc gaattcgagg agaacaagaa cagccatgat
      601 cagatcacct tcgcttcggt cttcaatttg ctgaccagtt ccgccactga tccaaccttt
      661 tggccggcct tgcgcttcgg cggctcatca acccgcacca cggtcagccg cggcgtcgga
      721 tcgacgccaa aatcagccgg cttcttgttg tcgatggttt tcttgcgcgc cttcatgatg
      781 ttgggcagcg aggcatagcg cggctcgttc agccgcaaat cggtggtgat gatcgacggc
      841 aggttgagtg ccacggtctc cagcccgcca tcgacctctc gcgtgacggt aatgacatcg
      901 ccgtccaccg ccagcttgct ggcgaacgtg ccctgcgacc agccaagcag cgcagccagc
      961 atcgggccgg tagcgctcat gtcgtcgtcg atcgcctgct tgccgagaat gatcagtttc
     1021 ggctgctcct ggtcggcaat tgccttgagc agcttggcca ccgccaacgg ctgcaggtcg
     1081 acatcggttt ccaccaggat gccgcggtcg gcgcccatcg ccagcgcggt gcggatcgtc
     1141 tcggcgcatt gcggcacgcc catcgagatc gccacgatct cggtcgccac gcctttttcc
     1201 ttcaggcgga cggcctcctc gacggcgatt tcgtcgaacg ggttcatcga catcttcacc
     1261 ccggaggtct cgatgccggt attatcggtc ttcacccgga ctttcacgtt gtagtcaacc
     1321 acccgcttga cggggaccag aactttcatt gggttaccct ggcgctttct gggacgagaa
     1381 aagggaacgt tcggacgcgt cttgacgagg cggacggcgc agatcgcccc gccttcgtcc
     1441 cggcgccttc gcacctgcga tatgggggcc ggaccttatg cgggggcaca agttctgtca
     1501 aacgctcgtc atggtttggg aacggcctac ggcgctgatc tgggttgcga gagcgggagt
     1561 gctggtggtc ccggtcaccg ctgcgtggcc aatcggcaac cgtgaatgtg ccacgtcaac
     1621 gccgcgtgat tttctgtaac cgatctgcaa atcaagactt gatcccggca tgcgtatggg
     1681 tttaaggcgc aagggcggac ccgcgttagc g
//
LOCUS       DATAVD010000066         1556 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2797675, whole genome shotgun sequence.
ACCESSION   DATAVD010000066 DATAVD010000000
VERSION     DATAVD010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2797675"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(180..1061)
                     /locus_tag="VHX39_01200"
     CDS             complement(180..1061)
                     /locus_tag="VHX39_01200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HEX3989765.1"
                     /translation="MSGSPRRRGGRRGAAHDDAHGGQWKIAYADFVTAMMAFFLLMWL
                     VSSATETQRAVIAKYFTTTSIFNLPKGNGVLDGGKAVMAGAEAKTERLTPSGMGGLQA
                     QPVAAKRDADAASTAAASVERQRFEALKAELEKMAHEGELKGVADNLAVDLTPEGLRI
                     QIFDRDGEAMFASGDAEPTPRLARILDVVGQVLQTVKNGVIISGHTDSQVLKRGTYSN
                     WELSSDRANSVRRRLENGGLAGNRILRVEGRAATDPLLPLEPLDPRNRRIAITVLRSE
                     VETQLRQQAATPPGPPP"
     gene            complement(1147..>1556)
                     /locus_tag="VHX39_01205"
     CDS             complement(1147..>1556)
                     /locus_tag="VHX39_01205"
                     /inference="COORDINATES: protein motif:HMM:NF013838.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FliG C-terminal domain-containing protein"
                     /protein_id="HEX3989766.1"
                     /translation="LAELLNHSDKAMVQQVMTTMTERDAEAAMKVRRLMFGFEDLVRV
                     DPATFGALIAECPAEKLPIALATADAPLRDLFLSRMSERAANMLREEMETIPAPRKRL
                     VDDAQAEIVVLAKRLAAEGRIFILDADEAAEGA"
BASE COUNT          259 a          497 c          475 g          325 t
ORIGIN      
        1 gcgcctgagc cttcatcccg gataacgctg aatcgattgc agtgttgatg ctcatgaacg
       61 tgtggtcctg cgttgtgaga gaatgaaagg cgtgaaggcc ccagggatca tgtgaaggcg
      121 gatcgcgcga aggttcggca cgagggaagt gccgcggcgg atgcgggaaa gcgagcggat
      181 catggcggcg gcccaggagg tgttgcggcc tgctggcgca gttgcgtctc gacctcgctg
      241 cgtaggacgg tgatggcgat ccggcggttg cgcggatcaa gcggttccag tggcagcagt
      301 ggatcggtcg cagcgcgtcc ttccacccgc aagatccggt tcccggccag tcctccgttt
      361 tccaaccggc ggcgcacact gttggcccga tcggacgaca attcccagtt cgaataggtg
      421 ccgcgcttca gcacctggct gtcggtgtga ccggagataa tcacgccatt tttgactgtc
      481 tgcagcacct gcccaaccac gtcgagaatg cgtgccaggc gtggcgtggg ttcggcatcc
      541 ccgctggcga acattgcttc gccgtcgcga tcgaagattt ggatgcgcag tccctcaggc
      601 gtcagatcga ccgcgagatt gtcggcaacc cccttcaatt caccttcgtg cgccattttt
      661 tccagttcgg ccttcagggc ttcaaaccgc tggcgttcca cgctcgccgc cgcggtggac
      721 gcggcgtcag cgtccctttt ggcggcaacc ggttgcgcct gcagaccgcc cattccactg
      781 ggcgtcagac gctcggtttt cgcctccgcg ccggccatca ctgccttgcc gccgtccagc
      841 acaccgttgc ccttcggcaa attgaaaatc gacgtcgtgg tgaagtactt cgcgatcacc
      901 gcgcgttgcg tctcggtcgc cgaggaaacc agccacatca gcaggaagaa cgccatcatc
      961 gcggtgacaa agtcggcgta ggcgattttc cattggccgc cgtgcgcgtc atcatgtgcc
     1021 gcgccgcgtc tgccacctct tcgcctgggg gatccgctca tgggattagc attgctccgc
     1081 gtttcgcatc agtctgaatt cgcccgagtt tccggtcact tttcgcacat tgcgattgca
     1141 gtcgcgttac gcgccctcag cggcttcgtc agcgtccaga atgaagatcc gcccctcggc
     1201 ggcaagccgt ttggccaaga cgacaatctc cgcctgcgcg tcgtcgacca gccgttttct
     1261 gggtgccggt atggtttcca tttcctcccg caacatgttg gcggcacgct ccgacatccg
     1321 ggacaggaac agatcgcgta gcggcgcgtc agccgtggcc agcgcgatcg gcagtttttc
     1381 agccgggcat tcggcaatca gtgccccgaa ggtcgccgga tcgacccgga cgaggtcctc
     1441 gaagccgaac atcagacgcc ggactttcat ggcggcttcg gcgtcccgct cagtcatcgt
     1501 cgtcatcacc tgctgcacca ttgccttgtc ggagtggttc aggagttccg ccaacg
//
LOCUS       DATAVD010000067         2726 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_751487, whole genome shotgun sequence.
ACCESSION   DATAVD010000067 DATAVD010000000
VERSION     DATAVD010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2726
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_751487"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VHX39_01210"
     CDS             complement(<1..363)
                     /locus_tag="VHX39_01210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009276928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEX3989767.1"
                     /translation="MGARSLQRSPAQRLARSLAVFGPGLVVMLADTDVGSVITAGQSG
                     AQWGYRLLALQLGLVPILYMAQELTVRLGIFTGRGHGELIRVTFGPAWGWISATGLGL
                     ATTGALLTEFSGVAGVGEL"
     gene            1556..2536
                     /locus_tag="VHX39_01215"
     CDS             1556..2536
                     /locus_tag="VHX39_01215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX3989768.1"
                     /translation="MLTEHPGTSAAADLEAADLAARHWRWPIPGALPIGSGAHRDAAC
                     RMFLDTFNPYRPSVIDWPLLSDEAQARLTGLPIWDIAVQTEGKARLRMRAYAQSLTDP
                     AWREAIARNAWEENRHKEVLSNLVAAYGIALAPEPVYRAPNDAEWAYLVTGFSECIDS
                     FFAFGLFEVAKRSGFFPAELVDTFEPVIQEEARHILLFANWLAWQRHQMPWWRRPWFE
                     VRVAAVWLFLGWERIGLARGMATDGAAPADNNFTLTGSRSVSDADIGVVSLMAVCLAE
                     NDRRFAGYDPRLLRPTTTPSIARLVCWLGSARDRLRRMFTWADRDGEKLR"
BASE COUNT          511 a          783 c          891 g          541 t
ORIGIN      
        1 cagttcgcca acgccggcca cgccggagaa ctcggtcagc aaggctcccg tagttgcgag
       61 ccccagaccg gtggccgaaa tccagcccca ggcggggcca aaggtgacgc ggattagctc
      121 gccgtgccct cggccggtga aaatgcccag acggacggtc agttcctgcg ccatgtagag
      181 gatcgggacg aggcccagtt gcagggcgag caaacggtag ccccattgcg caccactttg
      241 gcccgcggtg attacgctgc cgacatcggt atcggccagc atgaccacca atcctgggcc
      301 gaacacggcc aacgagcggg ccaggcgttg cgctggagag cgttgcaggc ttcgggctcc
      361 catctggcgt cgtgccgatc gtaccgcgcc aaggtgccgg cgttgcccga cggtgccagc
      421 cggttgcaac tggcatcggg cgatagtctc ccggcggtcg gaatgtcaac cgcggatggt
      481 gagcgcgcca taaggatcgg gattaggagt ttgttgttgc tttgcagtga gtcggagcag
      541 ctgaacattt cggttgcagg acatgaccct ccctgctgta accatgcagt tcatcccatt
      601 tatctgctgc gaaaacatac gccgttcgtc ctgtatccgt gacaaatttg ttattgtccg
      661 gcatccgaat aacgactttc atgtgatcga gggttcctgc ttgtttggat gctgccatcg
      721 ggtgaataag cgcaccctct gttcctcggt acctccagga taaaatccgg cgcgtgtgcg
      781 gacgagggcg taagaatgtg ccaccaatat cagcggcaat gccgcgacca gcgccgtaag
      841 gtattatttc agaggtacag aggtaccgag taacagagaa gattaattgg tctggcggat
      901 cgaaacagta aacttcaaca aaggtaattc atagacagga tttagaaagt cactcggctg
      961 ctgcgaaagc agatgtcttt tcgtcctgta tatgtgacaa actcctcaag ggccggtatc
     1021 cgtaaaacga ttttcatgcc ttcgaggtac ccgcccgcgg gttgattgcc tttaactaaa
     1081 gtgatcgact tacggcaatg ttgtatcgtg tcggggagcg tcagatccca gtggacgaaa
     1141 ggtcagactt atgagaacag gcaagaagga ataagaacgg ctggaccgtg acctcccagg
     1201 gccgcgtggc cgatatccgg tcctggtcgc gcaggcgcat tggccgctcg gcctgcagaa
     1261 tccaaatgag ttaccccgac cactgtctcg gtgcgaggcg agcggtgccg ggttgcagcg
     1321 acgatggctg cgccccacat ctggtcgcga tgatcgcaca ccccgattcg aaccggcttc
     1381 caccagcgag gctttccgtt gtggtgctgc cgcccttgtt gccgcgccgg ttgccctcac
     1441 ggcaggcgaa acggcacagt atcggcagcc cgacggggtg cccgctcgtt cgccacgccg
     1501 cgcgtctcgc tgagccggtc gtgcggccag gaccccacgc aacaaggaac ggcggatgtt
     1561 gacggagcac cctgggacca gcgcagctgc cgaccttgag gcggccgatc tggcggcgcg
     1621 gcattggcgt tggccaattc cgggcgctct gccgatcggg agcggcgcgc atcgcgacgc
     1681 cgcctgccgg atgtttctcg acaccttcaa tccctatcgg ccgtcggtca tcgactggcc
     1741 attgctgtcg gacgaggcac aggctcggct caccggcctg ccgatctggg atatcgcggt
     1801 gcagactgag gggaaggctc ggctgcgcat gcgggcctat gcgcaaagcc tcaccgatcc
     1861 ggcgtggcgc gaggcaatcg ctcgcaacgc ctgggaggaa aatcggcata aggaggtgtt
     1921 gtcgaacctc gttgccgcct acggcatcgc gctggctccg gaaccggtct atcgcgcgcc
     1981 gaacgacgcg gaatgggctt atctggtaac cggcttttcg gaatgtatcg acagtttctt
     2041 cgcgttcggc ctgttcgagg tggcgaaacg gtccggcttc ttccctgcgg aactggtcga
     2101 cacatttgaa ccggtgatcc aggaagaggc tcggcatatc ttgcttttcg ccaattggct
     2161 ggcgtggcaa cggcatcaaa tgccgtggtg gcggcggccg tggttcgaag tgcgggtcgc
     2221 cgcggtgtgg ctgttcctcg ggtgggagcg cattggcctt gcgcgaggca tggcgacgga
     2281 tggcgcagcg ccggcggaca acaatttcac cctgaccgga agccggtcgg tgagcgacgc
     2341 tgacatcggt gtggtgtcct tgatggcggt ttgtctggcg gagaacgacc ggcggtttgc
     2401 cggctatgac ccgagattgc tgcggccgac cacgacgccg tcgatcgctc ggctggtgtg
     2461 ttggctggga tcggcgcgcg accgcttgcg gcgcatgttc acctgggcgg atcgtgatgg
     2521 ggagaagctg cgatgacggc gtgacggagc acggcaggac gttcgtgtga aagtggcgca
     2581 atcagccaag gtcgacccat cacatatggg ggtctacgcg gtccggccgt ttgcgcatgt
     2641 gtccggacct cgtttgagcg ccaacgagga aacactgctg gcagattggg ccgggaagaa
     2701 ccgtcccgtt ttggtcgatt tctgga
//
LOCUS       DATAVD010000068         2641 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_5803, whole genome shotgun sequence.
ACCESSION   DATAVD010000068 DATAVD010000000
VERSION     DATAVD010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2641
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5803"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..967
                     /locus_tag="VHX39_01220"
     CDS             <1..967
                     /locus_tag="VHX39_01220"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="epoxide hydrolase"
                     /protein_id="HEX3989769.1"
                     /translation="QEAALNEFPQFKTPLHDIDLHYLHVPGVGPNPYPLLLLHGWPGS
                     VYEFLDIIPRLTDPARFGGDANDAFTVIAPSLPGYGLSFKPGQKRFTLQDIAACVHDL
                     MTQTLGFQKFAVQGGDWGAGTASLIGSRYPTSVCGIHVNLLFVPRDRPDGELSSESKR
                     YADDLAHWLREETGYQQIQGTKPQTLAFALTDSPAGLAAWIAEKFRTWSDCDGVAENA
                     ISRDRMLANISLYWFTGAIGSSFWPYYGRLHTTWPISPANPITVPTGYAAFPKEILLP
                     PRAIAEKTYPNIQRWTEMKKGGHFAAMEQPAALAVEIQDFFRPLR"
     gene            985..2184
                     /locus_tag="VHX39_01225"
     CDS             985..2184
                     /locus_tag="VHX39_01225"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3989770.1"
                     /translation="MAHDGLRFGIFLAPFHRVGDNPNLALQRDLELVQWLDQLGYDEA
                     WIGEHHSAGWETIASPEIFIGVAADRTRTIMLGSGVTSLPYHHPLMVAQRFVQLDHMT
                     RGRTMLGVGPGALVSDAYMMGIDPESQRRRMEESLGAIIALLEGKAPVTLKTDWFELK
                     EARLHLRPYTKGGFPIAVASVTTPAGWMAAGKYGCGILSIGAGVPGGPAKLADSWRMA
                     EAEAAKHGRRVSRDNWRLVINMHCAEDDETAMREVRVGERIETQKYFSETLGRPPMRS
                     EDPLREGLASATTLVGSPETIIDGINRMLAYTDGGAGAVLFRSHEWANREQTLRSYEL
                     FARWVMPRFQGSADSTLDSREWCSENRAGIFGPAMGALKKAFVDAGQEPPDMMRMRLH
                     TGKTEVD"
BASE COUNT          489 a          864 c          804 g          484 t
ORIGIN      
        1 gcaggaagcc gcgttgaacg agttcccgca gttcaaaacc ccgctgcacg acatcgatct
       61 gcactatctc cacgttcccg gcgtcggtcc gaacccgtat ccgctgctgc tgctgcatgg
      121 ctggccgggc tcggtatacg agttcctcga catcattccg cggctgaccg atccggcccg
      181 gtttggcggc gatgcgaacg acgccttcac cgtgatcgca ccgtcgctgc ctggctacgg
      241 attgtccttc aaacctgggc agaagcgctt cactctgcag gacatcgctg cctgcgtgca
      301 cgacctgatg acgcaaacgc tcggctttca gaaattcgct gtgcaaggcg gcgactgggg
      361 tgccgggacc gcatccttga ttgggtcgcg ctacccaacg tcggtctgtg gcatccacgt
      421 caacctgttg ttcgtcccgc gcgaccggcc cgatggcgaa ctctcgtcgg aatcgaaacg
      481 ctatgccgat gatcttgcgc actggcttcg ggaagaaacc gggtaccagc aaatccaggg
      541 caccaaacca caaaccctgg cttttgcact gacggactct ccggccggcc tcgccgcgtg
      601 gattgcggaa aaattccgca cctggtccga ttgcgacggc gttgcggaaa acgccatcag
      661 ccgggaccgc atgctggcaa atatctcgct ctattggttc actggcgcca tcggctcgtc
      721 gttctggccg tattatggcc gccttcacac gacctggccg atctcacccg cgaacccaat
      781 cacggtgccg accggctatg ccgcgtttcc aaaggaaatc ctgctgccgc cgcgcgcgat
      841 cgcggaaaag acctacccca acatccagcg atggaccgaa atgaaaaaag gcgggcactt
      901 cgcggcgatg gagcaaccgg ctgcacttgc cgtcgaaatt caggacttct tccgtccgct
      961 ccgataacaa ataaggacct caacatggct cacgacggct tgcgcttcgg catttttctg
     1021 gcgccgttcc accgggtcgg cgacaacccc aacctcgcac tgcaacgcga cctggaactg
     1081 gtgcagtggc tcgatcaact tggttacgat gaggcctgga tcggcgaaca tcattccgcc
     1141 ggctgggaaa ccatcgcctc gccggagatt ttcatcggtg tcgccgccga ccgcacccgc
     1201 accatcatgc tgggctcggg ggttaccagc ctgccttacc accatccgct gatggttgcg
     1261 caacgatttg tccaactcga ccacatgacc cgcggccgca ccatgcttgg cgtaggaccg
     1321 ggtgcgttgg tgtcggacgc ttacatgatg ggcatcgatc cggaatcgca acgccgccgc
     1381 atggaggaat cgctcggcgc gatcattgcg ctgctggaag gcaaggcccc ggtcaccctg
     1441 aagaccgact ggttcgaact aaaggaagcc aggttgcatt tgcgtcctta caccaagggc
     1501 ggctttccca tcgcggtcgc cagcgtcacc acgcctgcgg gttggatggc cgccggcaag
     1561 tacggctgcg gcatcctgtc gatcggtgcc ggcgttcctg gtggtcctgc caaactcgcc
     1621 gacagttggc gcatggcgga ggccgaggcg gcaaagcacg gccgccgtgt cagccgcgac
     1681 aactggcgcc tcgtcatcaa catgcattgc gccgaggacg acgaaaccgc catgcgcgag
     1741 gtccgcgtcg gcgagcgtat cgaaacccaa aagtattttt ccgagactct gggccgcccg
     1801 ccgatgcgca gcgaggaccc gttgcgggaa ggcctcgctt ccgcaacgac attggtcggc
     1861 tcgccggaaa ccatcatcga cggcatcaac cgcatgttgg cctataccga cggcggcgcc
     1921 ggcgcggtgc tgttccgcag tcacgaatgg gccaatcgcg aacagacgtt gcgcagttac
     1981 gagttgttcg cccgctgggt catgccgcgc ttccagggca gcgctgactc gaccttggat
     2041 tcccgtgaat ggtgcagcga gaatcgggcg gggatttttg gtccggcaat gggcgcgctg
     2101 aagaaggcgt tcgtcgatgc cggacaggag ccgccggata tgatgcggat gcggttgcac
     2161 accggcaaga ccgaagtcga ctgaccgctg gccttattga acgaccgccg cttccgcacc
     2221 gagcggaagc ggacggcgtc acgcattcgc gccggcggtt cgtgagcgac caggccgcag
     2281 accggcggca tccggatgtt cgatccgatc cgcgatcggg gcgaccacgg cagcggcaca
     2341 atctccctgg gctgtcgccg ggccaatcat ggccatcgtt caccacaaaa tccccgccat
     2401 cggaatcacg gaagcggttc cgtttcctgc aaaatccggc ccgtcgcgcg gccgatgcac
     2461 cggtcctgtg gcaatccggg tgtttcactg tgttgcgtgg ccggggaacc cctgctagag
     2521 gggcgcggcc ggttcgggcc ggctctcttc cccggtcatg cccgcgcgtc cccgcctgta
     2581 cgggggcatg tggccagcaa gatggaaacg cacgtggcgt ctgaagcgac gacgattgcc
     2641 a
//
LOCUS       DATAVD010000069         2088 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2611859, whole genome shotgun sequence.
ACCESSION   DATAVD010000069 DATAVD010000000
VERSION     DATAVD010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2611859"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2088
                     /locus_tag="VHX39_01230"
     CDS             <1..>2088
                     /locus_tag="VHX39_01230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maltotransferase domain-containing protein"
                     /protein_id="HEX3989771.1"
                     /translation="VQIDLALEYAGGTSSVIRRHHEWYQPILCRPADPREAPAPPGLH
                     VPLLRNAAVIEAFVEYWASEIKRLNDRGISGFRCKPSDNVPPEVWHRLTAALLRMDFA
                     FWTPGVPADCVRTLPPGRFNVVYNSLAWWDFGAGSLGEEMKRLGSVAPVANTVSLSDT
                     PAASATARQAAQRLLDVAAANGHGILLPMGFEFGLPTDLTHPCYGADDWQRLNEHAQL
                     DLSAAIRGANRRLAARIPPAAASEVLSADHAPVAVLLEQPVQITLANRSLRRCASFDL
                     AGILPMLDGKMSGFTGTKGGSALDDQEILLAPGEVRVFTGTPARPIRAAVPRDAGATG
                     DKLAAATAASRVAIESIDPAVDEGRFPVKRVVGERVTVSADIFADGHGQIAAVLQWRA
                     GDESAWRETEMQPLANDRWSATFMLDRVGPYWFRIVAWPDRFGTWRDELIKKHAAGLD
                     VTLELEEGKRLVTSIASGASGRLDPIVGALRRRGAERLTLLLDDETAAQVARADGRPG
                     RASSAEMPVTADRRAAEFASWYELFPRSQSGDPARHGTFRDVMRRLPSIRDMGFDVLY
                     FPPIHPIGRTNRKGRDNAVQAMEGDPGSPYAIGADAGGHDAILPELGTLEDFHALRDA
                     AASHGLELAVDFAIQCSPDHPWLREHPEWFDWRPDGGLRYAENPPKKYEDIVNVDFHA
                     PGAVPGLWIALRDV"
BASE COUNT          334 a          659 c          690 g          405 t
ORIGIN      
        1 gtccaaatcg accttgcgct ggagtacgcc gggggcacgt catcggttat ccgccgtcat
       61 catgagtggt atcagccaat cctctgccgt ccggccgacc cccgcgaggc gccggcgccc
      121 cctggtctgc atgtaccgct gctccggaac gccgctgtca tcgaggcttt tgtcgagtat
      181 tgggcgtcgg aaattaagcg cctcaatgat cgcgggatca gtggttttcg ctgcaagccg
      241 agcgacaatg tgccgcccga ggtttggcat cggctgaccg cggcgctgct gaggatggac
      301 ttcgctttct ggacccctgg cgttccagcc gattgcgttc ggaccctgcc gcccggcagg
      361 ttcaatgtcg tctacaacag tctggcctgg tgggatttcg gggcgggctc tctgggcgag
      421 gagatgaaac gcctcggttc ggtggcgccg gtcgccaaca cggttagcct gtcggatacc
      481 ccggcagcca gcgcaaccgc acggcaggca gcccagcgcc ttctcgacgt cgccgctgcg
      541 aatgggcatg gcatccttct gcctatgggc tttgaatttg ggttgcccac tgacctcacg
      601 catccctgct acggagcgga cgactggcag cgtctgaatg agcatgcgca gctcgatctc
      661 tcagcggcca ttcgtggggc aaatcggcgc cttgccgctc gcattccgcc cgccgctgcc
      721 tctgaagtcc tgagcgccga tcatgcgccc gtggccgtcc tgctggaaca gcctgtgcag
      781 atcactctgg caaaccgctc tctgcggcgt tgcgcttctt tcgaccttgc cggcattctg
      841 ccgatgttgg acgggaaaat gtctggtttc accggcacca aggggggcag tgcgctcgac
      901 gatcaggaga ttctgctggc accgggcgag gtgagggtct tcacaggaac gccggctcgc
      961 ccgatccgcg cggcagtgcc acgcgacgcc ggggcaacgg gcgacaagct tgccgctgcg
     1021 accgcggcct ctcgtgtcgc aattgagtcg atcgatcccg ctgtcgatga aggccgcttt
     1081 ccggtgaaac gggtggttgg cgaacgggtg accgtctcgg ccgacatttt cgccgatggg
     1141 cacggccaaa ttgcagcagt gttgcagtgg cgcgccggcg acgagagcgc ctggcgtgaa
     1201 acggagatgc agccgctcgc caacgaccgc tggtccgcga cgttcatgct cgaccgtgtc
     1261 ggtccttact ggttccgcat cgttgcatgg ccggaccgct tcgggacctg gcgcgacgaa
     1321 ctgatcaaga agcacgctgc aggcctcgac gtgacgctgg aactcgagga aggcaagcgc
     1381 ttggtcacct cgatcgcttc gggagcgtcg ggtcggctcg atcccatcgt tggtgccctc
     1441 aggcgccgcg gggcggagcg gctgactctg ttactcgacg acgagacggc ggcgcaagtt
     1501 gctcgggcgg acggtcgtcc tggccgcgca agcagcgccg agatgccagt cacggctgac
     1561 aggcgcgctg ctgaatttgc ctcctggtac gaactgttcc cccgcagcca gagcggtgat
     1621 ccggcgcgcc atggcacgtt ccgcgatgtc atgcggcgat tgccatcgat ccgcgacatg
     1681 ggcttcgacg tgctgtattt cccgccgatt catccgatcg ggcgcaccaa tcgcaaggga
     1741 cgggacaatg ccgttcaggc gatggagggc gatcctggca gcccctacgc gatcggggcg
     1801 gatgcgggcg gacatgatgc catccttccc gaacttggca cgctggagga tttccacgct
     1861 ttgcgtgacg ccgcagcctc gcacgggctt gaactcgctg tggacttcgc cattcagtgt
     1921 agtcccgatc atccgtggct gcgcgagcac cccgagtggt tcgattggcg cccggacggc
     1981 ggtcttcgct atgcggaaaa cccgccgaag aaatacgagg acatcgtcaa tgtcgatttt
     2041 catgccccag gggcggtgcc ggggctgtgg atagcgttgc gggacgtg
//
LOCUS       DATAVD010000070         1651 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2239397, whole genome shotgun sequence.
ACCESSION   DATAVD010000070 DATAVD010000000
VERSION     DATAVD010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1651
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2239397"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..195
                     /locus_tag="VHX39_01235"
     CDS             <1..195
                     /locus_tag="VHX39_01235"
                     /inference="COORDINATES: protein motif:HMM:NF015648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HEX3989772.1"
                     /translation="KVGWISRRTEEINITKVETVDVAQGIVGRIFDFGTVLIRGIGGS
                     WEPLRRVASPLQLRNAIIVG"
     gene            329..1516
                     /locus_tag="VHX39_01240"
     CDS             329..1516
                     /locus_tag="VHX39_01240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEX3989773.1"
                     /translation="MSTVNANIAAPRLLLVAGGAVKQIAEVLGKFGLSRPLIVTDPFM
                     VKLGLIDRCLAPLAAAGIKADVFSETIPEPADTVIEQGVAAFAKAPYDCLIGFGGGSP
                     IDTAKAMAILASGGGRMRDYKVPFAADRGAVPVIAIPTTAGTGSECTRFTVITDHERD
                     EKMLINGLGCLPLAAIVDYELTLTVPPRTTADTGVDSFTHALEAFVSKRANPFSDALA
                     LAAMDLIGKNIRAAYAEPDNHRAREAMMIGATQAGLAFSNSSVALVHGMSRPIGAHFH
                     VPHGLSNAMLLPAITRFSIHGAEARYAQAARCSGFATTGDSDPVAAAKLVSGLETLNR
                     ELSVPTPAGFGIKEADWTGKMTLMAEQALASGSPNNNPRVPTASEIVALYRAVWTGAS
                     VNI"
BASE COUNT          311 a          523 c          505 g          312 t
ORIGIN      
        1 aaggttggat ggatctcccg ccgaaccgaa gaaatcaaca taaccaaggt tgaaacggtc
       61 gatgttgcgc aaggaatcgt cggccgcatt ttcgatttcg gcaccgtgct gatccgaggc
      121 attggcggta gctgggaacc gttgcgccgt gtcgcatcgc ccctgcagtt acgcaatgcg
      181 atcattgtcg gttagacaag atcgccgcat acggaagcgc gcggtggcgc cacgcaagca
      241 ttttcgcagg cgggcgagtg ccctgtcctg acagacgccg cagccggcgc tatgtctgcc
      301 tccgcatcgc ccgcccggag gaaatggcat gagcaccgtg aacgccaata tcgccgcccc
      361 tcgccttttg cttgtcgccg gcggagcggt gaagcagatc gctgaggtat tgggtaaatt
      421 cggtctctct cgcccgctga tcgtcaccga tccgttcatg gtcaaactgg ggctgatcga
      481 tcgctgcctc gcgcccttgg ctgccgccgg gatcaaggcc gacgtattca gcgagaccat
      541 ccccgaaccg gccgacacgg tgatcgagca aggcgtcgca gcgttcgcca aggcacccta
      601 cgactgcctg atcggtttcg gcggcggctc gccgatcgat accgccaagg cgatggcgat
      661 cctcgcatcg ggtggcggca ggatgcgcga ctacaaagtc ccgttcgcag ccgatcgagg
      721 cgccgtgccg gtcatcgcca tccccaccac tgccggcacc gggagcgagt gcacgcgctt
      781 cacggtcatc accgatcatg aacgtgacga aaagatgctc atcaacggac tgggctgcct
      841 gccgctggct gccatcgtcg attacgagct caccctgacc gtgccgccgc gaaccacggc
      901 cgataccggc gtagacagtt ttacccacgc gctggaggcg ttcgtgtcca aacgggccaa
      961 cccgttttcc gacgcgctgg cgctcgcggc gatggatctg atcggcaaga acattcgcgc
     1021 cgcctatgcc gagcccgaca accatcgcgc gcgggaggcg atgatgatcg gggcaacgca
     1081 ggccggtttg gcgttctcca acagctcggt cgccctggta cacggcatgt cgcggccgat
     1141 cggcgcgcat ttccatgtcc cacacggttt gtccaacgcc atgttgctgc cggcgataac
     1201 gcggttctcc atccacggtg ccgaggcgcg ttacgcgcag gcagcacgct gttctggatt
     1261 tgcaacaacc ggcgacagcg accccgttgc cgcggcgaag ctggtgagcg gactggaaac
     1321 tctcaatcgg gaactgtcgg tgccgacgcc ggccggcttc ggcatcaaag aggcggattg
     1381 gaccggcaag atgacactga tggcggagca ggcactggcg tccggcagcc cgaacaacaa
     1441 tccgcgcgtg ccgactgcat ctgaaatcgt cgcgttgtat cgagcggtct ggaccggcgc
     1501 gtcggtcaat atttgacatg tcccaatctg gacttttgtc tgattgctca ccgtttgatt
     1561 tctgccaaac gtgtacgtcg cctggctcac ggtttaccag ggcagcagtg cacctcgtgc
     1621 gtctgtccat gcaaaaataa catggcatgg t
//
LOCUS       DATAVD010000071         1581 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_564313, whole genome shotgun sequence.
ACCESSION   DATAVD010000071 DATAVD010000000
VERSION     DATAVD010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_564313"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            57..1538
                     /locus_tag="VHX39_01245"
     CDS             57..1538
                     /locus_tag="VHX39_01245"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEX3989774.1"
                     /translation="MSLKLGITRLSIASVSPVCVFSLRFVRTIILSHLLAPDNLGAAV
                     ALMTILAGCELITDVGLDRFVIVNDGKDRAQAVAVAQQITLGRAIFLAAAIAIFSGPL
                     AGVFGASEHLKGVAWLGLVPLIFGLRNWRLVQVQQDYRYGPEAIATVCGQLAGVALVF
                     PAAVWFHDERAILASLIAEAVVHVSLSNILVRREPVPFVDAEMRKAVFKWGIPLMLNG
                     VGLMAVKQLDQVIVANLFDLKTLALYALSINLAITPTAPMQAIGQKLCLPFLGNAKSN
                     PQLARQASLLTLLITACVAAAYALPVGLLLDRLVPLLYGHEYQVTEAFCALAMVDAFL
                     RFCRGGPNMILLHHGLTSRLTVGNLVAGIGTAVALALGLWSGRLEAVMVGLVIGDFIS
                     LVFLLALLRRHLSVATAMFHNGLMVVTLCVAAVVIWAGGNLSIGQRVLVFVIGGGVIG
                     LDAFVVFQQYGRDFLRRPVQIAARHAAPMPAIATVAVQGEPST"
BASE COUNT          248 a          476 c          512 g          345 t
ORIGIN      
        1 gccgaaggag gtaccgacac gcggctgacc gcagcgagcc tgaccggatt ttatccatgt
       61 cattgaaact aggcattacg cgactgtcga tcgcctcggt gtccccggtg tgcgtattct
      121 cgttgcgctt tgtgcgcacc atcatcctgt cgcacctgct ggcgccggat aatctcggcg
      181 ccgccgtcgc gctgatgacg attctcgccg gctgcgagtt gataaccgac gtcgggctcg
      241 accgtttcgt catcgtgaat gacggcaagg accgggcgca ggccgtcgcc gtcgcccagc
      301 agatcacgct cggacgagcg atttttctgg cggcggctat cgccattttc tccggcccac
      361 tggccggcgt gttcggcgcc agtgagcatc tgaagggagt cgcgtggctc ggcctcgtcc
      421 cgcttatttt cggcctcagg aactggcggc tggtgcaggt ccagcaggat taccggtatg
      481 gtcccgaagc catcgccacc gtttgcggac agctggcggg cgtcgccctg gtattcccgg
      541 cggccgtgtg gtttcacgac gaacgcgcca tattggccag cctgatcgcc gaggcagtgg
      601 tccatgtctc cttgtcgaac atcctggtcc gacgtgagcc cgtgcctttt gtcgatgcgg
      661 aaatgcgcaa ggcggtgttc aagtggggca ttccgctgat gctcaacggc gttggcctga
      721 tggcggtcaa gcaactcgac caggtgatcg tcgccaacct gttcgacctg aagaccctgg
      781 cgctgtatgc cctgtcgatc aacctggcga tcacgccgac tgcgccgatg caggccatcg
      841 gccagaagct ttgcctgccg tttctgggca atgcgaagtc caacccgcag ctcgcacgtc
      901 aggcatcgct gctgacgcta ctgattacgg cgtgcgtcgc ggcggcctac gcgttgccgg
      961 tggggctgct gctcgaccgg ctcgtgccgc tgctgtacgg gcacgaatat caggtcactg
     1021 aggcattttg cgcgttggca atggtcgacg cattcctgcg cttctgccgt ggcgggccga
     1081 acatgatcct gctacatcac ggtctgacca gtcgactcac cgtcggcaat ctggtggcgg
     1141 ggatcgggac ggcggtcgca ctggcgctcg gactttggtc gggacgactg gaagccgtga
     1201 tggtcggact ggtgatcgga gatttcatct ccctggtttt cttgctggct ttgctgcgcc
     1261 ggcatttgtc ggtcgcaacg gcaatgttcc ataacggact gatggtggtg acgctgtgcg
     1321 ttgcggcggt tgtcatatgg gccggcggca atctcagcat cggtcagcgg gtgctggttt
     1381 tcgtcatcgg cggcggggtg atagggttgg atgccttcgt ggtgtttcaa cagtatggcc
     1441 gcgatttcct ccgccgaccg gtacaaattg ccgcgcgaca cgccgccccg atgccggcga
     1501 tcgcgacggt tgcagtgcaa ggcgagccat cgacgtagtc agtgaaaatc gcccgcggcc
     1561 cgttcgcgaa acagatcaaa c
//
LOCUS       DATAVD010000072         4216 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1495410, whole genome shotgun sequence.
ACCESSION   DATAVD010000072 DATAVD010000000
VERSION     DATAVD010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4216
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1495410"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1339
                     /locus_tag="VHX39_01250"
     CDS             <1..1339
                     /locus_tag="VHX39_01250"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003628670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEX3989775.1"
                     /translation="YLPVSHPEIEEFVELRRPTGGDPNRKALNLHHGIQIPDAFMRAV
                     EADESWALRSPKDKAVVREISARSLWIRILTARIETGEPYLIFSDHVARAQPEHHKLA
                     GLEVKTSNLCSEITLPTGRDHHGKERTAVCCLSSLNLEKWFEWENHPTFIEDVMRFLD
                     NVLQDFIDRAPPGMEKARYSAMRERSVGLGVMGFHSFLQALNVPWESVVAKVWNKRIF
                     RHIRAQADTASVILAEERGACPDAEEYGSKERFSHKMSLAPTASISIIAGNASPGIEP
                     IAANVFLQKTLSGSFTVRNRHLQKLLEARGQDNDAVWSSITTSKGSVQHLDFLTDDEK
                     AVYKTAFELDQRWIIEHAADRAPFICQSQSVNVFLPANVNKRDLHQIHFMAWKRGVKS
                     LYYCRSLSIQRADNVSVKAVAPVDNIHPAANDATAQLPLVASSTDYEECLACQ"
     gene            complement(1343..2074)
                     /locus_tag="VHX39_01255"
     CDS             complement(1343..2074)
                     /locus_tag="VHX39_01255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3989776.1"
                     /translation="MSQQQVVAQLAPHGVLRAAINMGNFLLVTGRTPSGDPDGCSPDM
                     ARAIAASLGVPVQMVPYAKPGELADDAENDKWDIGLIGAEPARAEKIDFTAAYVEIEA
                     TYLVPAGSPIKSISEVDVKGNRIAVTARSAYDLWLERNIHNATLHRGNSQAEVVAMFL
                     NEKMEALAGLRPGLTGDVAKIPGSRILDGQFSAVQQAIGTPKKNTAGAVWLKQFVENA
                     KKSGDVAALLVKHGTVGRLSVAPLT"
     gene            2181..3167
                     /locus_tag="VHX39_01260"
     CDS             2181..3167
                     /locus_tag="VHX39_01260"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase family
                     protein"
                     /protein_id="HEX3989777.1"
                     /translation="MPEFPPDAILDALDRMNLPGATGGERLTGGVSSDIWRIDLPSGP
                     ICVKRALAKLRVAADWHAPVERNVFEARWMRHAAGFAPRLLGQDAASGTLAMEYLSPE
                     DHPLWKNRLRDGIADADFAAQVAQALVTIHARTAADSSVADEFPTDAIFFDIRLEPYL
                     VATAAAHPDLGRELLALVATTQAKKKALVHGDVSPKNILCGPSGPVFLDAECAWWGDP
                     AFDLAFCLNHLLLKCLWTPRASDGFLRCFDALATAYLGGVMWESPDALEKRAAGLLPG
                     LLLARVDGKSPVEYVTRESQKDQVRRVARALLADPPVRLAAIRTAWKKEIDA"
     gene            3164..>4216
                     /gene="eno"
                     /locus_tag="VHX39_01265"
     CDS             3164..>4216
                     /gene="eno"
                     /locus_tag="VHX39_01265"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF012341.4"
                     /note="catalyzes the formation of phosphoenolpyruvate from
                     2-phospho-D-glycerate in glycolysis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEX3989778.1"
                     /translation="MTETSIAFVHARQVWDSRGRPTVEADVMLESGAVGRAIAPAGAS
                     TGSGEAVDLRDGGDAFGGYGVQRAVANVNEAIAYAITGMDATNQAALDARLIALDGTP
                     NKSRLGANAIVSVSMAVAHAAAHAAGLPLYRYLADTEVSLIPLPQVQIFGGGAHAGRR
                     VDIQDFMIMCPGADSFAQAMAWTAEVYRTAGVLMAEAGSLAGVADEGGWWPAFSTNEQ
                     ALDMLVRAIERAGFRIGDQVGIALDVAASEFGQGGRYKLALEDRELDSAGMIGLLSGW
                     IARYPILSIEDPLAEDDAEGFAAFTALHGRSLQIVGDDFLVSDAARVRTAAANVSANT
                     VLLKPNQCGTLSETLDA"
BASE COUNT          765 a         1168 c         1414 g          869 t
ORIGIN      
        1 gtatttgccg gtgtcgcacc cggaaatcga ggaattcgtc gaactgcggc gtcccaccgg
       61 tggcgatccg aatcggaaag ccctgaacct gcatcacggc attcaaatcc ccgatgcgtt
      121 catgcgcgcg gtggaggcgg acgagtcatg ggcgttgcgg tcaccgaagg ataaggcggt
      181 ggtgcgcgag atttcggccc ggtctttgtg gatacggatc ctgactgccc ggatcgagac
      241 cggcgagccg tacctgatct tctccgacca tgtcgcgcga gcccaaccgg agcaccataa
      301 gctggcgggg ttggaggtga agacttcaaa cctgtgcagc gaaattacgc taccgaccgg
      361 acgcgatcat catggcaagg agcgcaccgc ggtctgctgc ctgtcatcgc ttaatctgga
      421 aaaatggttc gagtgggaaa atcacccgac cttcatcgag gacgtgatgc ggttcctcga
      481 caacgtgctg caggacttca tcgatcgggc gccgccgggc atggagaagg cgcgctattc
      541 ggcgatgcgc gaacgttcgg ttggtctcgg cgtgatgggt tttcactcgt tcctgcaggc
      601 actgaacgtg ccgtgggaaa gcgttgtcgc caaggtctgg aacaagcgca ttttccggca
      661 tattcgtgcg caggctgaca cggcgtcggt gatcctggct gaggaacgcg gcgcttgccc
      721 ggatgccgag gaatacggca gcaaggaacg tttctctcac aaaatgtctt tggcgccgac
      781 tgcgtcgatc tccatcatcg ccggcaacgc gtcgcctggc atcgaaccga tcgcggcgaa
      841 cgtgttcctg caaaaaacgt tgtccggcag cttcaccgtg cgcaatcggc atctgcaaaa
      901 actgctggag gcgaggggtc aggacaacga cgcggtttgg tcgtcgatca ccacctcgaa
      961 gggcagtgtg cagcatctgg attttctgac cgacgacgag aaggcggttt acaagactgc
     1021 gttcgaactg gatcagcgct ggatcatcga gcatgccgcc gatcgcgctc cgttcatttg
     1081 ccagagtcag tcagtcaacg tcttcctgcc ggccaatgtg aacaagcgcg acctgcacca
     1141 gatccatttc atggcgtgga agcgtggcgt taagtcgctg tattactgcc gcagcctgtc
     1201 gatccaacgg gcggataatg tcagcgtgaa agcggttgct ccggtcgata atatccaccc
     1261 ggcggcgaat gatgcgaccg cgcaacttcc gctggtcgca tcaagcaccg attacgagga
     1321 atgccttgcc tgccagtaat cgtcaggtca gcggcgcgac cgacagacgg ccaaccgtgc
     1381 cgtgcttgac gagtaaggcc gcgacatcgc cggacttttt cgcgttctca acgaattgtt
     1441 tcagccagac agcaccggcc gtgttctttt tcggcgtgcc gatggcttgc tgcacggcgc
     1501 tgaactgacc gtcgaggata cgtgagccgg gaattttcgc cacatcgccg gtcaatcccg
     1561 gacgaaggcc cgccagagcc tccatttttt cgttgaggaa catcgcgacg acctcggcct
     1621 ggctgttgcc gcggtgcaag gtggcgttgt ggatgttacg ctcgagccac aaatcgtaag
     1681 cactgcgcgc ggtgaccgcg atgcgattgc ctttgacgtc gacctcggag atcgacttga
     1741 tcggtgagcc ggcgggcacc agataggttg cctcgatctc cacgtaagcg gcggtaaaat
     1801 cgatcttttc ggcgcgggcg ggctcggcgc cgatcaggcc gatgtcccac ttgtcgttct
     1861 cggcatcgtc ggccagttcg ccgggttttg cgtaaggcac catttgcacc ggcacgccga
     1921 gactggcggc gatcgcgcgg gccatgtcgg gggagcagcc gtccgggtca ccggaaggcg
     1981 tgcggccggt gacaagcagg aaatttccca tattgatcgc ggcgcgcagt actccatgcg
     2041 gtgctaactg ggcgacgact tgttgttgag acatgtgttc acgtccaagg ttggttgacc
     2101 tggtcagagt atcgtggcgc ctggggtggg ggcaacccgt gcatcttgac cgcccatggc
     2161 atccggtccc taaaactgcc atgcccgagt ttccgcccga tgccatcctt gacgcactcg
     2221 accgcatgaa tctgcccgga gcgacgggcg gtgaacggct gaccggcggc gtatcgtcgg
     2281 atatttggcg gatcgacctt ccgtccgggc cgatttgcgt caagcgcgcg ttggcgaaac
     2341 tgcgggtcgc agccgactgg catgcaccgg tggagcgcaa cgtgttcgag gcgcgttgga
     2401 tgcgtcacgc tgcaggtttt gctccgaggt tgttgggcca ggatgcggcg agcggcacgc
     2461 tggcgatgga gtatctgtcg ccggaagatc atccgttgtg gaagaaccgg ttgcgcgatg
     2521 gcatcgcgga tgccgatttt gcggcgcagg tcgctcaggc gctggtgaca attcatgcgc
     2581 ggactgcggc cgattcttcc gtcgcggacg agtttccgac ggatgcgatc tttttcgaca
     2641 tcaggttgga gccgtatctg gtcgcgaccg ccgcggcgca tccggatctt gggcgagagt
     2701 tgctggcact ggtcgcgacg actcaggcca aaaagaaagc gttggtgcac ggcgatgtca
     2761 gcccgaagaa tatcctgtgc gggccatcgg gtccggtgtt cctggatgcg gaatgcgcat
     2821 ggtggggcga tccggccttc gatctggcgt tttgtttgaa tcatctgctg ttgaaatgcc
     2881 tgtggactcc gcgcgcgtca gacggatttt tgcgctgctt cgatgcgctg gccacggcgt
     2941 acttgggcgg ggtgatgtgg gaatcgccgg acgcgttgga aaagcgagcg gccggactgc
     3001 tgcccggatt gttgcttgcg cgggtcgacg gtaagtcgcc cgtcgaatac gtcacacgcg
     3061 agtcgcagaa ggatcaggtc aggcgggtgg ctcgcgcgtt gctggccgat ccgccggtgc
     3121 gcctggcggc gattcgaact gcctggaaga aggaaattga cgcatgaccg aaaccagcat
     3181 cgccttcgtg cacgctcgcc aggtttggga cagccgaggg cggcctaccg tagaggcgga
     3241 tgtgatgttg gaaagcggtg ctgtggggcg ggcaattgca cctgccgggg catcgaccgg
     3301 cagcggcgag gcggtggatt tgcgtgatgg cggcgatgcc tttggcggtt atggcgtgca
     3361 acgagcagtg gccaatgtga atgaggccat cgcctatgcg atcaccggca tggatgcaac
     3421 gaatcaggcg gcactcgacg cgcgattgat tgctctggac ggcacaccga acaaaagccg
     3481 gctgggtgcc aacgccattg tgtcggtgtc gatggccgtg gcgcacgctg ccgcgcatgc
     3541 cgccgggttg ccattgtacc gttatctggc cgatacggag gtgtcactga tccctctgcc
     3601 acaagtccag atattcggtg gtggtgcgca tgcaggacgg cgtgtggata ttcaggattt
     3661 catgatcatg tgtccgggag ccgacagttt tgcacaggcc atggcctgga ccgctgaggt
     3721 gtatcggacc gccggcgtgt tgatggcgga ggctggcagt ctggccggtg ttgcagatga
     3781 aggtggttgg tggccggcgt tttcgaccaa tgagcaggca ttggacatgc tggtccgtgc
     3841 catcgagcgt gccggcttcc gaatcggcga tcaggtggga attgcgctcg acgttgctgc
     3901 atcggaattc ggtcagggcg gacgttacaa gctggcgctg gaggatcggg aactcgacag
     3961 cgccggtatg attgggttgc tgtccggttg gatcgcgcgc tatccgatcc tgtcgattga
     4021 ggacccgctg gcggaggacg acgccgaagg gtttgccgca ttcaccgcgc tgcatggcag
     4081 gtcgttgcag attgttggcg atgattttct ggtcagcgat gccgcgcgcg tgcgcacagc
     4141 tgctgcaaac gtgagcgcca acaccgtgct gctgaaaccc aatcagtgcg gcacattgag
     4201 cgagacgttg gacgcc
//
LOCUS       DATAVD010000073         1632 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_937021, whole genome shotgun sequence.
ACCESSION   DATAVD010000073 DATAVD010000000
VERSION     DATAVD010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_937021"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..729
                     /locus_tag="VHX39_01270"
     CDS             <1..729
                     /locus_tag="VHX39_01270"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HEX3989779.1"
                     /translation="STRERTHGTVARLAQETTLVPAAHLTCVGATQEEVNEVARRYWD
                     AGVRHIVALRGDPPPGTEYAPHPGGYGFAADLVAGLHAIAPFEISVGAYPEIHPAASS
                     PQADLEALRRKLDAGATRAITQYFFDTDVYLRFLDRCLAAGITAPIVPGIMPVSNFAQ
                     IARFSALCGASVPDWLGRLFEATEEQPELRRMIGMVVAAEQVRLLQANGVDEFHFYTL
                     NRPELTYAIAHLLGCRASGSDELA"
     gene            complement(706..>1632)
                     /locus_tag="VHX39_01275"
     CDS             complement(706..>1632)
                     /locus_tag="VHX39_01275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="O-linked N-acetylglucosamine transferase"
                     /protein_id="HEX3989780.1"
                     /translation="ILLGNLPAGLQLHERRWELLKGEFQPKSTQPVWLGETCIAGKVL
                     YLHREQGLGDTLQFCRYATMAARAGAQVILEVESTLVRPISSLQGVTRVIAEDDPVPD
                     HDLRCPIMSLPLAFGTTIETIPAEIPYLHADPADAEMWRDRLRGIEGKKVGLVWAGAS
                     RTGLGAGVVAADRRRSIALARLAPVTSVSGCTFFSLQLGAAAEQTKQAPAGMALRDHT
                     GELSDFADTAALVDNLDLVISVDTSTAHLAGAMGKPVWLLNRFDTCWRWFLEREDSPW
                     YPTMRIFRQPYPGDWDHVIRSVASALREFVAA"
BASE COUNT          301 a          517 c          510 g          304 t
ORIGIN      
        1 tccacgcggg aacgaaccca tggcactgtg gctcggctcg cacaggagac gactctggtt
       61 cctgctgcgc acctgacctg cgttggcgcg acacaggaag aggtgaatga ggtcgcgcgg
      121 cgatattggg acgctggcgt gcgccacatc gtggctctgc gtggcgatcc gccgccgggc
      181 accgagtacg ccccgcaccc gggcggctac ggctttgccg ccgatctggt cgccggtttg
      241 catgccatag cgccgttcga aatctcggtc ggcgcctatc cggaaatcca tccggccgcg
      301 agcagcccgc aagcggacct cgaagcgctg cggcgcaagc tggatgccgg cgcgacgcgg
      361 gccatcacac aatatttttt cgacaccgac gtgtatttgc ggttcctgga ccgctgcctc
      421 gccgccggga ttaccgcccc gattgtcccg gggatcatgc cggtctcgaa tttcgctcag
      481 attgcccggt tttccgctct gtgcggcgcc agcgtgccgg actggttggg ccgtctgttc
      541 gaggccacgg aagagcaacc cgaattgcgc cggatgattg gcatggtggt cgcggcggag
      601 caggtgagac tgctgcaggc caatggcgtc gacgagtttc acttctacac gttgaaccgg
      661 ccggagttga cctatgcgat cgcgcatttg ttgggctgcc gggcgtcagg cagcgacgaa
      721 ctcgcgtagc gcggaggcga ccgagcggat cacatgatcc cagtcgcctg gatacggttg
      781 ccggaagatc cgcatggttg ggtaccatgg gctgtcctcc cgctccagaa accagcgcca
      841 gcacgtatcg aaccggttca gcaaccagac cggtttgccc atcgcgcctg cgaggtgagc
      901 ggttgaggtg tcgacgctga tcaccaggtc gagattgtcc accagcgccg cggtatcggc
      961 gaaatcgctc agttctccgg tatggtcgcg cagtgccatg ccagccgggg cctgcttcgt
     1021 ctgttctgcg gccgctccaa gttgcagcga gaaaaatgta caaccggaca ccgaggtcac
     1081 cggcgcaagt ctggcaagtg cgatcgaccg tcgtcgatct gccgcaacga cgcctgcgcc
     1141 cagaccggtc cgcgaagcgc cagcccagac caagccaact tttttgccct cgatgccccg
     1201 caaacggtct cgccacatct cagcgtcagc aggatcggcg tgcagatagg gaatttccgc
     1261 cgggatggtt tcgatggtgg tgccgaacgc cagcggtaga ctcataatcg ggcatcgcag
     1321 atcgtgatca ggcaccggat cgtcttcggc gatgacacgt gtgacgcctt gcaacgacga
     1381 gatagggcga accaacgtgc tctcaacttc cagaatgacc tgagcacccg ctcgcgcagc
     1441 catcgtggcg tacctgcaaa actgcaacgt atcgccgaga ccttgttccc gatggagata
     1501 aagcaccttg cctgcgatgc aggtctcgcc gagccagacc ggttgggttg acttcggttg
     1561 aaactcgccc ttcagcagct cccaacgccg ctcgtgaagt tgcagacccg ccggcagatt
     1621 gccgagcaat at
//
LOCUS       DATAVD010000074         8950 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3543912, whole genome shotgun sequence.
ACCESSION   DATAVD010000074 DATAVD010000000
VERSION     DATAVD010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8950
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3543912"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..507)
                     /locus_tag="VHX39_01280"
     CDS             complement(<1..507)
                     /locus_tag="VHX39_01280"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3989781.1"
                     /translation="MAVTWKDSTADIAGTKMHLSRAGSGKTVLVLHHDIGTLDSLPFY
                     DSLAEQFDVLVPHLPGWGKSERPEWLRHPRDMAAMAAWLLADLGVNDVNLVGLGFGGW
                     IAAEMTSQSPRSYRRLALVGPMGIKPPEGYIYDQAIVSYLDYPQAGFHSRDAFHRVYG
                     QVDTDQLEQ"
     gene            600..1127
                     /locus_tag="VHX39_01285"
     CDS             600..1127
                     /locus_tag="VHX39_01285"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEX3989782.1"
                     /translation="MVAESRRARAESGVIGIGPAPDSENINPYLVNAGVQHITLISGA
                     ALVHHADSFAIARGGHLDLCVLGAFEVAENGDIANWARSLDEPIKQVDGAMDLAVGAQ
                     RLWVAMEHTTKAGGSRIRAACSYPLTAKGVVKRVYTDLAVLEVTPRGFTVLDTIPGLT
                     RDALQARTEATLIWT"
     gene            complement(1181..2605)
                     /locus_tag="VHX39_01290"
     CDS             complement(1181..2605)
                     /locus_tag="VHX39_01290"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3989783.1"
                     /translation="MDAPTHTVTYRPGNNAAYILGNKLDSIPFSGYHMLIIAVLALVG
                     FIEGYDLVITGSLLVLAKEPLHLTGSDIRWLAVGPTFMLCLGGFASSAISDHWSRKTV
                     MLIGVIATTFCTLLIPLVQTAEQLIILRLLTGLGAGGAVSAAFPIAAELMPAQHRRTY
                     GAIYEMSLAAAFTLVPFLAFLLAGDANSFRLLALPGGLAVTVVPVLVWFVIPESPRWH
                     LGRGRRQVAADIVNRIISRCGDPVLPLTAQDLGGHMNTTTERLPPYWAIFARGQLRWT
                     VVGILAGVCAGTAYFLIAVLLPKALVDQGSAVSLSFGLSSLVFFASIPGKGFTGFLME
                     VIGRRWTIAYALAGSLPGLFLMLVAHLAGQYATLVMVTGALITGFTVLSAFTATRVYL
                     SEQFPTALRGRGHIFGESTGRLFAGVLAPFLMEPYTGSPTIFFGTIFVVVAIGALIPR
                     LFGRETVGQLETVTEEAREIRLAA"
     gene            complement(3098..4249)
                     /locus_tag="VHX39_01295"
     CDS             complement(3098..4249)
                     /locus_tag="VHX39_01295"
                     /inference="COORDINATES: protein motif:HMM:NF011990.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate diphosphatase"
                     /protein_id="HEX3989784.1"
                     /translation="MTSIRITGGQVLLDHDGLVATDLGLADCRIAAIGGTRGKGIGLD
                     ASGLLVLPGIVDIHGDAFERQIQPRPGVDFPMGIALRDTERQLLANGITTAFHGVTLS
                     WEPGLRSLGSWQALLTALEAERWTCDMRVHLRWEAYNLDALDIAVADIAAGRVHLLAF
                     NDHTPAILHKLKDPVEGAKYAGRAGMAMHDFQAFTDRVAARADEVPAALQRIAAAARE
                     AGLPMASHDDDTLPVRARFRSLGADICEFPMAEAVGRDARAQGEHVVMGSPNVVRGRS
                     HLNWTSAATMAEAGICDILSSDYYYPAMARAAFILTDRGAFDIARAWALIAANPASAA
                     GLTDRGSIEVGKRADLVLMEPAGRTLVATIANGRLAHLTAEGAARLTMN"
     gene            complement(4246..5040)
                     /gene="phnF"
                     /locus_tag="VHX39_01300"
     CDS             complement(4246..5040)
                     /gene="phnF"
                     /locus_tag="VHX39_01300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0015716 - organic phosphonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism transcriptional regulator
                     PhnF"
                     /protein_id="HEX3989785.1"
                     /translation="MKPARVRPTGAIEHTDRSPTAAARESGLTLWRQIVETLRQEIGG
                     PDYPAGARLPTEAELSARFSVNRHTVRRALEELSRGGLIRVEQGRGSFVAEDVLDYTV
                     GPRTRFTEWIHRHNMEPSGRVLQLREIAADSTIATALGIRPGARVVLLERLGLADDIP
                     VSLARHYFPAGRLRGILQALAANPRITDALTTVGVDDYVRQVTKVTARAPTAPEVELL
                     RMARNRPVLVTESVNVDRAGVVVEFSVGCYPTPRVQIVFEPGEGQA"
     gene            5142..5609
                     /gene="phnG"
                     /locus_tag="VHX39_01305"
     CDS             5142..5609
                     /gene="phnG"
                     /locus_tag="VHX39_01305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015716 - organic phosphonate transport
                     [Evidence IEA];
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnG"
                     /protein_id="HEX3989786.1"
                     /translation="MNDSVFAPQSVSERQHWMSVLARAPAAAIEAGITRDGPLPAWTR
                     VRGPETGLVMVRGRAGGSGSPFNLGEMTVTRCTVRLASGATGHAYIAGRDERQAELAA
                     VADALLQDPATRNVLCDSLIEPLAQAQREQRQDRAEKAAATRVEFFAMRNMRS"
     gene            5606..6181
                     /gene="phnH"
                     /locus_tag="VHX39_01310"
     CDS             5606..6181
                     /gene="phnH"
                     /locus_tag="VHX39_01310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnH"
                     /protein_id="HEX3989787.1"
                     /translation="MSQSLQAGFANPVADAQHCFRAVLDAMAHPGRVTRATGVTAPAP
                     LGAAAAAVVLTLVDHETPLWLDPDTATARQWIEFHCGAKVVADSAKCAFALATALPPL
                     HRFPIGSHESPETSATVICEVDSFEHGKAFRLSGPGLREPLALTVSGLPRDFVSIWQR
                     NHRLFPCGIDLILCAGDRLVAFPRTVAIEEV"
     gene            6186..7265
                     /locus_tag="VHX39_01315"
     CDS             6186..7265
                     /locus_tag="VHX39_01315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-phosphorus lyase complex subunit PhnI"
                     /protein_id="HEX3989788.1"
                     /translation="MAYVAVKGGERAIRNAHAWLAEERRGDPTVPALSLDQIREQLGR
                     AVDRVMAEGSLYDPELAALAIKQAQGDLIEAAFLLRAYRTTLPRFAHASPLDTAAMRA
                     ARRISAIFKDLPGGQTLGPTYDYTHRLLDFELAENQPPPDAPRAAPDLSPVPRVPDIL
                     GREGLLEADGPADVEPGDLTREPLSFPAGRDVRLQALARGDEGFLLAMGYSTQRGYGG
                     SHPFAGEVRMGEVSIEIEPPELGFAIDIGDLTVTECQMVNQFKGSKTQPPQFTRGYGL
                     VFGFSERKAMSMALVDRALRAEELGEDVTAPAQNPEFVLYHSDNIEATGFVEHLKLPH
                     YVDFQSELQNVRRLREAVERREAAE"
     gene            7262..8092
                     /locus_tag="VHX39_01320"
                     /pseudo
     CDS             7262..8092
                     /locus_tag="VHX39_01320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040407.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate 5-phosphate
                     C-P-lyase PhnJ"
     gene            8089..8865
                     /gene="phnK"
                     /locus_tag="VHX39_01325"
     CDS             8089..8865
                     /gene="phnK"
                     /locus_tag="VHX39_01325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018835 - carbon phosphorus lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnK"
                     /protein_id="HEX3989789.1"
                     /translation="MSEQPIIAATGLTLSFGNIAALRDVDAELYLGEILAIVGESGSG
                     KTTLLNVLSGHLQPQSGIVTYRDPAGTAHDVHAMPAPMLRTLQRSDWGFVHQDPRRSL
                     RMNVSAGGNVGERLMAQGARHYGDIRSQALDWLQQVEIDADRIDDLPRTFSGGMLQRL
                     QIARTLVTHPRLVFMDEPTGGLDVSVQARLLDLIRSLVARLGVAVVLVTHDIAVARLL
                     GHRIAVMQRGRVVETGLTDQVLDDPRHPYTQLLVSSVLQA"
BASE COUNT         1771 a         2831 c         2758 g         1590 t
ORIGIN      
        1 ctgttccagt tggtcggtgt cgacctggcc gtagacacga tggaacgcgt cgcggctgtg
       61 gaagccggcc tgcggatagt ccagatagga aacgatcgcc tggtcgtaga tgtagccttc
      121 ggggggtttg atgcccatgg gaccaaccag agccaaacgg cggtaggagc gtggggactg
      181 gctggtcatt tcggcagcga tccagccgcc gaagccgagg ccaacgaggt ttacgtcgtt
      241 gacgccaaga tcggcgagca gccaggctgc catggcggcc atgtctcggg ggtgccgcag
      301 ccattcgggg cgttcggatt tgccccagcc cggcaggtgc ggcacgagaa cgtcaaactg
      361 ttccgcgagc gaatcgtaga acggcaggct gtcgagggtg ccgatgtcat gatgcagtac
      421 aagcacggtc ttgccagaac cagcccgcga caggtgcatt ttggttcccg cgatatctgc
      481 ggttgagtct ttccaggtca cggccatgcg ttgtccctcc cgtggggcgt ctgtgggagg
      541 gaggatactc acgggtagcg tggttgtcca atgggtaggg tgaactgcaa gccagggcga
      601 tggtggcaga aagccgtcga gcacgcgcgg aaagcggcgt catcggtatc ggcccagcgc
      661 cggattccga aaacatcaac ccgtatctgg tcaatgccgg agtgcaacac atcacgctga
      721 tctccggcgc cgcactggtc caccacgccg atagtttcgc gatcgcgcgc ggcggccatc
      781 tcgacctgtg tgtcctcggc gccttcgagg ttgccgaaaa tggcgatatc gccaactggg
      841 ctcgttccct tgacgaacca atcaaacagg tcgacggcgc gatggacctt gcggtcggcg
      901 cccaacggct ttgggtggcg atggaacaca ccaccaaagc cggcggctca cgcattcgcg
      961 ccgcatgctc ctacccgctg accgcgaaag gcgtggtgaa acgcgtctac accgacctag
     1021 cggtgctgga ggttacgccg cgcgggttca ccgtgctaga cacgatcccg ggtctcacgc
     1081 gagacgcttt acaggcacgc acggaagcga cgctgatctg gacatgatca ccaaaatcac
     1141 agcaacctcc actgcgggag gttgctctga cataacaaaa tcacgctgcg agtctgatct
     1201 ccctggcctc ctctgtcacg gtctccaatt gaccgaccgt ctcgcgacca aacagccgtg
     1261 ggatcaacgc gccaattgcc acgaccacga aaatcgtacc aaagaagatc gttggtgacc
     1321 cggtgtaagg ctccatcaga aacggtgcca atacgccggc gaacaaccgc ccggtcgact
     1381 ctccaaagat gtgcccacgg ccacgcagcg ctgtcgggaa ctgctcggaa agataaacgc
     1441 gggttgccgt aaacgccgac aacacggtga aaccggtgat caacgcgccg gttaccatca
     1501 ccaacgttgc atattgtccg gccagatgcg ccaccaacat aaggaacagg ccaggcaacg
     1561 atccggccag cgcgtacgcg attgtccagc gccgcccgat cacctccatc aggaacccgg
     1621 tgaatccttt gccgggaatg ctcgcgaaga acaccagcga gctgagcccg aaactcaggc
     1681 tgacggcgga gccttgatcg accaacgcct ttggcagcag cacggcaatc aggaagtacg
     1741 cggttccggc gcaaacaccc gccaggatcc cgaccaccgt ccagcgcagc tgcccgcgtg
     1801 cgaagatagc ccagtacggc ggcagccgct cagtggttgt gttcatatgg ccgccaagat
     1861 cctgcgccgt caacggcagc acagggtcgc cgcaccggct gatgatccgg ttgacgatgt
     1921 cggccgctac ctggcgccgg cctcggccca aatgccagcg cgggctttcc ggaatgacga
     1981 accagaccag caccggcacg acggtcaccg ccaggccacc cggcagcgcc agcaagcgaa
     2041 acgagttggc atctccggcc agcagaaatg ccagaaacgg gaccaatgtg aaggcggccg
     2101 ccagcgacat ctcataaatc gcgccatacg tgcgccggtg ttgcgccggc attagctcgg
     2161 cggcgatcgg gaacgccgcc gacactgcgc cgcccgcacc aagcccggtc agcaagcgca
     2221 gaatgatcag ctgctcggcg gtttgcacca gcggaatcaa cagggtgcaa aatgtggttg
     2281 cgatcacgcc gatcagcatg accgtcttgc ggctccagtg gtcggagatc gccgacgacg
     2341 caaacccacc caggcacaac ataaaggtcg gaccgacggc gagccaacgt atgtcggatc
     2401 cggtcaggtg cagcggctcc ttcgccaaca ccagcaatga gccggtgatc accaggtcgt
     2461 agccctcaat aaacccgacg agcgccagca cggcgatgat caacatgtgg taaccgctga
     2521 acgggatact atcgagtttg ttgccaagta tgtaagcggc attgttgccg ggtcgataag
     2581 tgacggtatg cgtcggcgcg tccattgcgt cctcctgatc tgaagccaga ccggacggca
     2641 gtgcggtaca gcgggtcgcc tttgcaggcg gctatttcat ttcgattacg tatcttatgc
     2701 tgcgcgatcc cgcgttggcc gcactccaga gtgccgcccg ttggcgtgta gctcccaatt
     2761 gcatttggag gtggattcac tccaccttcc ggttagcgtc cggcccagtt tccgaaccgt
     2821 agcagaacct aggccctatc tgcggagttg tcagcaagga agttgcgtcg gcttaaaaat
     2881 taattggcac gcaacctaaa ccggccacgt tatgcaatgt cgtgatagat gactgctcac
     2941 atcccggcac gctgcatatc gcactaacag gcgatgtaag gaataatctg tcaggataaa
     3001 cggcggtcgg tgtcgacggt tcgcactacg aattcatcgc atcgtctgcc catttatcgc
     3061 gaatactgca acaaacgcat ccggcaacgg gcggccatca attcatcgtc aaccgcgccg
     3121 caccttccgc agtcagatgc gccaaccggc cgttggcgat cgttgccacc agcgtccgcc
     3181 cggctggctc catcagaacc aggtcggcgc gcttcccgac ctcgatcgac ccgcggtccg
     3241 tcagtcccgc ggcagatgcc ggattggcgg caatcaacgc ccaggcacgc gcgatgtcga
     3301 aagcgccgcg gtccgtcagg atgaaggcgg ctcgcgccat tgccggatag taataatccg
     3361 aggacagaat atcgcagatc cccgcctcag ccatcgtcgc tgccgaggtc cagttcagat
     3421 gcgaccgccc ccgcaccaca ttcggactgc ccatcaccac atgctcaccc tgggcacgcg
     3481 cgtcgcgacc gacggcttcg gccatcggga attcgcagat atccgcaccc agagagcgga
     3541 accgagcccg caccggcagc gtgtcgtcat cgtggctggc catcggcagg ccggcctcgc
     3601 gagccgccgc ggcaatccgc tgcaacgctg ccggcacctc atcagcacgc gcggcaaccc
     3661 ggtcggtgaa cgcctggaag tcgtgcatcg ccatgcccgc gcggccggcg tatttcgcgc
     3721 cctcaaccgg atccttgagc ttgtgcaaaa tcgccggcgt gtgatcgttg aacgccagca
     3781 gatgcacccg gccggctgca atgtcggcaa ccgcgatgtc cagggcatcg agattgtacg
     3841 cctcccaccg cagatgcacc cgcatgtcgc acgtccaccg ttccgcctcc aacgcggtca
     3901 gcaacgcctg ccaggagccc aggctgcgca ggcccggttc ccaggacaga gtgacgccat
     3961 ggaacgccgt ggtaatgcca ttggcgagca actgccgttc ggtatcccgc aatgcgatcc
     4021 ccatcgggaa atctaccccg ggacgcggtt ggatctgccg ttcgaacgcg tcgccatgaa
     4081 tgtcgacaat ccctggcagc accagcaagc ccgatgcgtc gagcccgatg cccttccctc
     4141 gcgtcccacc aatcgcggcg atacggcaat cggcaaggcc aagatcggtt gccaccagac
     4201 catcgtgatc aagcaaaacc tgaccaccgg tgattcgaat cgacgtcatg cctggccttc
     4261 tcctggttcg aacacgatct gcacgcgagg cgtgggataa cagccgacgc tgaactcgac
     4321 caccacaccg gctcgatcga cattgacact ctcggtgacc agaaccggcc ggttgcgcgc
     4381 catccgcaac agctcgactt ccggcgctgt tggtgcgcga gcggtgacct tggtgacctg
     4441 gcggacatag tcgtccacgc cgactgtcgt cagcgcatcg gtaatccgcg gattggcagc
     4501 cagtgcctgg aggatgccgc gcagccggcc tgccgggaaa taatggcgcg ccaggctgac
     4561 cgggatgtca tcggcgaggc caagccgttc caacaacacc acgcgcgcgc ccggacggat
     4621 gcccagagcg gtcgcaatcg tcgaatcggc ggcaatctcg cgcagttgca ggacgcgacc
     4681 ggacggttcc atgttgtggc gatggatcca ttcggtgaac cgcgtgcgag ggccgaccgt
     4741 gtagtccagc acatcctcgg cgacgaagct gccgcggcct tgttcgacgc ggatcaaccc
     4801 gccgcgagac agttcctcca aagcccggcg gacggtgtgg cgattgacac tgaaacgggc
     4861 tgacagctct gcctcggtcg gcaggcgcgc gccggccggg tagtccggcc cgccgatctc
     4921 ctggcgcagc gtttcgacaa tctgccgcca cagcgtgagg ccggactcgc gagctgccgc
     4981 ggtcgggctt ctgtcggtgt gctcgatcgc cccggttggc cttacccgag caggcttcat
     5041 caatgtgtca tccaatccga atggaccctg tgctgattgg cggttgacgt tgccacggca
     5101 attgtataga catccagatg tctccacaac cctcgatcga catgaacgat tcagtttttg
     5161 ctccgcaatc cgtcagcgaa cgacagcact ggatgtcggt tctggcgcgc gcaccggccg
     5221 ctgcgatcga ggccgggata acccgggatg gtcccctgcc cgcctggacc cgtgtgcgcg
     5281 gcccggaaac cggtctcgtg atggtgcgcg gtcgcgccgg tggctccggc tcgccgttca
     5341 atcttggaga aatgaccgta acgcgctgca ccgtgcggct ggcgtcgggc gcgaccggcc
     5401 atgcgtatat tgccgggcgg gatgagcggc aggcggaact tgccgcggtc gccgatgcgt
     5461 tgttgcagga tccggcgaca cgcaacgtgc tgtgcgattc gctgatcgag ccattggccc
     5521 aggcacagcg cgaacaacga caggacaggg ctgaaaaagc cgcggcgacg cgcgtcgaat
     5581 tcttcgccat gcggaacatg cggtcatgag ccagagcctt caggccggct ttgccaatcc
     5641 cgttgccgac gcgcaacact gcttccgcgc cgtcctcgac gccatggccc atcctgggcg
     5701 tgtcacccgc gcgaccggcg tgacggcacc ggcgccacta ggcgcggcag ccgccgcggt
     5761 ggtgctgaca ttggtggacc acgaaacccc gttgtggctc gatcccgaca cggcaacggc
     5821 acggcaatgg attgagtttc attgcggtgc caaggtcgtt gcggattctg caaagtgcgc
     5881 tttcgcattg gccacggcgt tgccgccgct gcatcgattt ccgattggct cgcacgagtc
     5941 accggaaacc tcggccacgg tcatttgcga ggtggattcg ttcgagcatg gcaaagcgtt
     6001 ccgtctgagc gggcctggac tgcgcgaacc gttggcactg accgtctccg gcctgccgcg
     6061 cgattttgtg tcgatctggc agcggaacca tcggttgttc ccatgcggca tcgacctgat
     6121 cctgtgcgcg ggcgaccgcc tggtcgcatt cccccgcacc gtcgcgatcg aggaggtctg
     6181 acgccatggc atatgtcgcg gtcaaaggcg gcgaacgcgc aattcgcaac gcgcacgcct
     6241 ggctggccga ggaacgccga ggtgacccaa ccgtccccgc tctttccctt gaccaaatcc
     6301 gcgagcaact gggccgcgcg gtggaccggg tgatggcgga agggtcgctt tatgacccgg
     6361 aactcgcggc gctggcgatc aagcaggcgc aaggcgatct gatcgaggca gcattcctgc
     6421 tgcgagccta ccgcaccacg ctgccgcggt ttgcgcatgc aagtccgctc gatacggcgg
     6481 cgatgcgggc ggcccgccgc atctcggcga ttttcaagga cctgccgggc ggccagacct
     6541 tgggtccgac ctatgattac acccatcggc tgctggattt cgaactggcg gagaatcagc
     6601 cgccacccga tgcgccgcgt gctgccccgg atctttcacc agtgcctcgg gtgcccgaca
     6661 ttctgggccg cgaagggttg ctggaagcgg atggtccggc tgatgtcgaa cccggcgacc
     6721 tgacccgcga accgttgagt tttcccgctg gccgcgatgt acgtctacag gcgctggcac
     6781 gcggcgatga agggttcctg ttggcgatgg gctactcaac gcagcgcggc tatggcggca
     6841 gccatccgtt tgccggtgag gtccgcatgg gcgaggtctc gattgaaatc gaaccgccgg
     6901 aacttggttt cgctatcgat ataggcgatc tgacggtcac cgaatgccag atggtgaacc
     6961 aatttaaagg ctcgaaaacc cagccgccgc aattcacccg aggttacggt ctggtgttcg
     7021 gattttccga acgcaaagca atgtccatgg cgctggtcga tcgcgcctta cgcgccgaag
     7081 aactaggcga ggacgtcaca gcgccggcac aaaatccgga attcgttttg tatcattccg
     7141 acaacatcga agccaccggg ttcgttgaac atctgaaact gccgcactac gtcgattttc
     7201 agagcgaact gcaaaacgtc cgccgcctgc gcgaagcggt ggaacggcga gaggcggcag
     7261 aatgaaaggc tacaacttcg cgtatctgga cgagcaaacc aaacgcatga tccgccgtgc
     7321 cctgctgaag gcggtggcaa ttcccggcca ccaggtgccg ttcgggtcac gtgagatgcc
     7381 gttgccgtat ggctggggca ccggcggtat ttaggtcacc gcctccgtgc ttggcgaaga
     7441 tgatactttg aaagtgatcg accagggcgc cgacgacacc accaacgcgg tgtcgatccg
     7501 gcagttcttt gcccggactg ccggcgtccg caccacgacg cacacggccg aagcaaccgt
     7561 tattcagacc cggcatcgta tccccgaagc aacgctacag gaaaatcaga tcatcgttta
     7621 ccaggtgccg cagccggaac cgttatatcg cctggagccc agtcgggtgg agacgaaacg
     7681 gatgcacgcg ctttcggatt acgggttgat gcacgtgaag ctgtacgagg atgtggcgcg
     7741 gctcggacaa atctcgatca gctacgacta tccggtcatg gtcaacgagc gctatctgat
     7801 gtcgccttca ccgatcccgg cgttcgacaa tccaaaaatg catcagatgc cggcgttgca
     7861 actgttcggt gccggccgcg agaaacgaat ttacgccatc ccgccatgga ccgacgtgcg
     7921 ctcgctcgac ttcgacgatc atccatttcg gccgatcaac gcgcatcagc cgtgcgggct
     7981 atgcggtgca acggactcct acaaggatga ggtcatcact gacgatcgag gcggacggat
     8041 gttcgtttgc tccgacaccg atcattgcga acggcggcgc gaaacggcat gagtgagcaa
     8101 cccatcattg cggcaaccgg cctaacgctg tcgtttggca acatcgcggc gctgcgcgat
     8161 gtcgacgctg aactttatct cggcgaaatt ctggcgatcg tgggtgaatc gggctcgggt
     8221 aaaaccacgt tgttgaacgt attatccggg catctgcaac cccagagcgg catcgttacg
     8281 tatcgcgacc cggcgggcac agcgcatgac gtacacgcga tgccggcgcc gatgctgcgg
     8341 actttgcaac gctccgactg gggattcgtg catcaggacc cgcgccgcag cctgcgcatg
     8401 aacgtcagcg ccggcggcaa cgtcggcgaa cggctgatgg cgcaaggtgc gaggcattac
     8461 ggcgacatcc gtagccaggc gctggactgg ctgcagcagg tggagatcga cgcggaccgg
     8521 attgacgatt tgcctcgcac cttctcgggc ggaatgctgc aacggttaca aatcgcgcgc
     8581 acgctggtga cgcatcccag gctggtgttc atggacgagc caaccggtgg tctggacgtg
     8641 tcggtgcaag cgcgactgct cgacctgatc cgatccttgg tcgcgcggct gggtgtcgct
     8701 gtggtgctgg taacgcatga tattgcggtg gcacggctgc tcgggcaccg cattgcggtg
     8761 atgcaacgag gccgcgtggt ggagaccgga ttgaccgacc aggtgctgga cgacccaagg
     8821 catccttata cgcagttgct ggtcagttcg gtgttgcagg catgatgact gatcccgtat
     8881 cgcgacgaaa caatccgctt ccgccaaagc gcgcggatca gttcgcttta cacgatggcg
     8941 gcgtcgggtg
//
LOCUS       DATAVD010000075         2845 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3170759, whole genome shotgun sequence.
ACCESSION   DATAVD010000075 DATAVD010000000
VERSION     DATAVD010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2845
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3170759"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..238)
                     /locus_tag="VHX39_01330"
     CDS             complement(<1..238)
                     /locus_tag="VHX39_01330"
                     /inference="COORDINATES: protein motif:HMM:NF019826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR family transcriptional regulator"
                     /protein_id="HEX3989790.1"
                     /translation="MLDAQPAAPVSPSPGPLKYGAAAARLNAILLKVTAAGFITIADL
                     AAAIEVSEMTVRRDLVRLDGEGKVRLVHGGVRATE"
     gene            346..1281
                     /locus_tag="VHX39_01335"
     CDS             346..1281
                     /locus_tag="VHX39_01335"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEX3989791.1"
                     /translation="MSKSKPSPTAVFVGLAVWDTIALVPEFPEPDGRVVADAIIEAGG
                     GPAATAAVACVRLGMPAAFVGAVGDDARGARILDALRSEGVDVSAAVVVPGMPSAAAV
                     VVADRSRATRALCPTLPPAWSLTAGSAQACRIASAAILHVDHAGYAPVMSLYDGLGQA
                     RPPLSIDAGNPIPGLDHRRATVFAPTLGRLVATFGRSDPDALLRHVAGPEWVVATDGA
                     AGAYVLAGGKSWHVPAYQAVPCVSTLGAGDVFHGALVAAWMRGFSPNESAAYAGIAAG
                     LSCRAIDGRSAIPDHPTVIKALPAQIAAMRHLMEA"
     gene            1286..2197
                     /locus_tag="VHX39_01340"
     CDS             1286..2197
                     /locus_tag="VHX39_01340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HEX3989792.1"
                     /translation="MQKTSTRSEPKTATALPGDLARLARPSGAFAMLAIDQREALRTM
                     LADHDGRPVADAAVTAFKLAVTRILSPYASAVLLDRQFVWDQAVATGVVAPDCALIAA
                     ADRFIPSSTEFVDSVEIDNDVIPSAVSAQGAAALKLLVIWRADEPAEPRVRMIRAFVD
                     RCRQAGLISIIEPVARPPRSGGPFDLNAGVIEAAKELGGLGADLYKAQVPSNGRGDEA
                     MIRAACAQLTKAIASPWVVLSSGVEPNDFPRAVELACAEGASGFLAGRAVWRPAIENS
                     DREAALAGDAADRLKRLCEVADRAMAR"
     gene            2201..>2845
                     /locus_tag="VHX39_01345"
     CDS             2201..>2845
                     /locus_tag="VHX39_01345"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX3989793.1"
                     /translation="MDTIPQIVRAIEFPALGTVAVTTMPFPAAPMSGEVLLRTEYLGI
                     CGTDLHLLHGKHPWVRPPVIIGHECVATVVQTGAADTRFRPGQRVVVNPLFTCGHCRA
                     CVAGAPNHCETAKVMGFRLPGAGRTHFVVPESQLHHVPEGVDPRLASLAEPLAVGIHA
                     ASRAADLEKVMIIGGGTIGLCVLLAALMRGAGEVRVVEPVASKRALALKLGAREA"
BASE COUNT          446 a          868 c          962 g          569 t
ORIGIN      
        1 gctccgtggc gcgtacgccg ccatgaacga ggcgaacctt tccttctccg tcgaggcgga
       61 cgagatcgcg gcgcacggtc atttccgata cctcgatcgc agccgccaga tcggcgatcg
      121 tgatgaaacc cgccgcggtt actttcaata ggatggcatt cagccgagcg gctgcggccc
      181 catatttgag aggtccaggc gacggtgaaa caggggcggc aggttgggca tccagcatga
      241 ttgtatccta tgtcatatat aagacccttt acaaacggca tggggtctgt taactaaaat
      301 tcaaagttgg taatttataa ccaaaaattt ctggttgagg aaccgttgag caaatccaaa
      361 ccatcaccga ctgccgtctt cgttgggtta gccgtatggg acaccatcgc cttggtgccg
      421 gaatttccag aacctgatgg tcgtgtcgtg gcggacgcga tcatcgaagc tgggggcggc
      481 ccggcggcca cggctgcggt tgcctgtgta cgcctcggca tgccggccgc cttcgtcggt
      541 gcggtcgggg acgacgcccg gggggctagg atcctggatg cgttgcgcag cgagggggtg
      601 gatgtttcgg ccgctgtcgt ggttccaggc atgccctcgg ccgctgctgt ggtggtggct
      661 gaccgatctc gtgcgacccg ggcgctgtgc ccgaccctgc cgccggcctg gagtctgacg
      721 gccggctcgg cgcaggcgtg ccgtatcgca tccgccgcga tccttcatgt cgatcatgcc
      781 ggctatgcac ctgtcatgtc tttgtacgat gggcttggcc aggcgaggcc gccgctgtcg
      841 atcgatgcgg gaaatccgat tcccggtctc gaccatcgtc gggccacagt gtttgcgccc
      901 accctcggac gtctagtggc aaccttcggt cgtagcgacc cggatgccct tctgcgccat
      961 gtcgccgggc ccgaatgggt ggttgcgacc gacggtgccg ccggggccta tgtgctggca
     1021 ggaggaaaat cctggcatgt tcccgcctat caggcggttc cctgcgtttc cacgctcggg
     1081 gcgggcgacg tcttccatgg cgcgctcgtc gccgcctgga tgcgtggttt ctcacccaac
     1141 gagtccgccg cttatgcggg aattgccgca gggctgtcct gccgagccat cgatgggcgt
     1201 tccgcgatcc ctgatcatcc gacggtgatc aaggcattgc ccgcacaaat cgccgccatg
     1261 cggcacctta tggaggcttg agatcatgca gaagacttca acccgttcgg agccgaagac
     1321 ggcaactgcc ttgccaggag atctcgcgcg gcttgcacgg ccttccggag ccttcgcgat
     1381 gctggcgatc gatcagcgcg aagcgctacg cacgatgctt gcagatcatg acggaaggcc
     1441 ggtagcggat gctgcggtca ccgcgttcaa gcttgccgtg acccgtatcc tttcccccta
     1501 tgcgtccgcc gttctccttg atcggcagtt cgtgtgggat caggccgttg ccacaggcgt
     1561 ggtcgctccg gactgtgcgc tgatcgctgc cgccgatcgg ttcattccga gttcgacgga
     1621 gttcgtcgat agcgtcgaga tcgataatga cgttatcccg tcggcggtat ccgcgcaggg
     1681 cgccgcggcg ctcaagctcc tggtcatctg gcgcgccgac gaaccggcgg agccgcgtgt
     1741 ccgaatgatc agggcgttcg ttgaccggtg ccgccaagcc gggttgatca gcatcatcga
     1801 gccggtcgcg aggccgccgc gaagcggcgg gccgttcgac ctgaacgccg gtgtgatcga
     1861 agcggcgaag gaactggggg gcctgggtgc cgatctctac aaggcccagg tgccgtcgaa
     1921 cgggcgtggt gacgaggcca tgatccgtgc ggcctgtgcg caactaacga aggcgattgc
     1981 ctcgccatgg gtggttctgt cctccggagt ggaaccgaat gattttccgc gtgcggttga
     2041 gctcgcctgc gcggaaggtg cgtctggctt cctcgccgga cgagccgtct ggcgcccggc
     2101 catcgaaaat tccgaccgcg aggcagcgct cgctggcgac gccgccgacc ggctgaagcg
     2161 cctgtgcgag gtagccgacc gagcgatggc gcgctgagcc atggacacta ttcctcagat
     2221 cgtgcgcgcg atcgagtttc cggcattggg aacggtggcg gtaacgacaa tgccgtttcc
     2281 cgctgcgccg atgtcgggcg aggtgttgtt gcgcaccgaa tatctcggca tctgtggcac
     2341 ggacctgcat cttttgcacg gtaagcatcc gtgggtccgt cctccggtca tcatcgggca
     2401 tgaatgtgtc gcgacggtgg tgcagacagg tgcggcggat accaggttta ggcccggaca
     2461 gcgcgtcgtc gttaatccgc tattcacctg cggtcactgc cgggcctgtg tcgccggggc
     2521 gccaaaccat tgcgagaccg ccaaggtgat ggggttccgc ctcccgggcg ccggccgcac
     2581 gcatttcgtc gttccagagt cgcagctgca ccacgttccc gagggggtcg atccgaggct
     2641 tgcctcgctg gctgagcccc ttgccgtcgg catccacgcg gcgagccggg ctgcggacct
     2701 cgaaaaggtg atgatcatcg gcggcgggac catcggtctt tgcgtcctgc tcgccgcgtt
     2761 gatgcgcggc gcgggggagg tgcgggtggt ggagccggtc gcttcaaagc gggcattggc
     2821 gctgaagctt ggggcgaggg aggcg
//
LOCUS       DATAVD010000076         4410 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2798486, whole genome shotgun sequence.
ACCESSION   DATAVD010000076 DATAVD010000000
VERSION     DATAVD010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4410
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2798486"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..803
                     /locus_tag="VHX39_01350"
     CDS             <1..803
                     /locus_tag="VHX39_01350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX3989794.1"
                     /translation="PERFVLMLRGYLTFDFGRSFFRDKPVLQLIEEKMPVSISLGLWS
                     TLLVYFISIPLGIAKAVRDGSRFDVASSAAVLIGYAVPGFLFAILLVVLFAGGSFVQW
                     FPLRGLHSEGSESWSIPARILDYLWHIVLPTIAIVVGGFASLTVLTKNCFLEEIRKQY
                     VVTARAKGASEQRILYRHVFRNAMLLIIAGFPSAFIGILFSSALLVEIIFSLDGLGLL
                     GFQAAIQRDYPVMFGTLYIFTLLGLLMQIVGDMLYTIVDPRIDFEARQ"
     gene            803..1846
                     /locus_tag="VHX39_01355"
     CDS             803..1846
                     /locus_tag="VHX39_01355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3989795.1"
                     /translation="MHLSPLTRRRLAIFRSHKRGYWSLWIFLVLFGFSLFAEFLANDR
                     PLLILYDGHWYVPVLQDYSEDTFGSNFFPTDADYTEPDVQASINAHGWMIWPPIRYSY
                     DSIVKRPSTPAPSPPDWKNLLGTDDQSRDVLARVIYGFRISVLFGFTLTAISSVIGIA
                     AGAIQGFRGGLVDLLFQRFIEIWSGMPQLYLLIILASIITPSFGILLIFLLLFSWMNL
                     TGVVRAEFLRGRNLEYVRAAKALGVSDLAVMWRHILPNAMVATLTFLPFTLSGSVTIL
                     ASLDFLGFGLPPGSPSLGELVSQGKNNLQAPWLGITAFVVLGGLLTLLVFIGEAVRDA
                     FDPRKAPRTGGPR"
     gene            1843..3447
                     /locus_tag="VHX39_01360"
     CDS             1843..3447
                     /locus_tag="VHX39_01360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3989796.1"
                     /translation="MSLVSVEDLTVSFGGRPVVDAVSFTLDRGETLALVGESGSGKSL
                     TALSLLQLLPPGATCDGRVVMDGQSMIGAGDKVLRRLRGGIAGMIFQEPMTSLNPLTR
                     IGQQIAEAVQLHQRTTSAAARARVIKLLHEVGFPDAAHRLDAFPHQLSGGQRQRVMIA
                     MALANDPALLIADEPTTALDVTIQAQILKLLAAEKSARGLALLLISHDLAIVRRYADR
                     VCVMKDGVVVEAGTVSDVFDSPQHSYTQMLLAAEPRGRPRPLRAGVPTLMQGSDVKVH
                     FAIRRGILRRPVGHVRAVDGVNVVVHEGETVGLVGESGSGKSTMGYALLRLVTADGCI
                     RFDGSDLAGLDKKRLRRLRADMQIVFQDPFGSLSPRLTVAEIIAEGLSVHEPALSRIE
                     RGKRVAAALEEVGLASTIGDRYPHEFSGGQRQRVAIARAMVLKPRFVVLDEPTSALDM
                     SVQAQIVDLLQQLQQDHHLGYLFISHDLKVVRALAHRIVVLRGGKVVEEGPAEDVLAR
                     PRHDYTRALMAAAFTLDADDSGVVRD"
     gene            complement(3551..>4410)
                     /locus_tag="VHX39_01365"
     CDS             complement(3551..>4410)
                     /locus_tag="VHX39_01365"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX3989797.1"
                     /translation="ADFSFWALVEWYVARLLKAANMLDRGQANAARIQVTRNFVEIPD
                     LPGAFHGYTLLHITDLHADISLRAMGALPEVIRTLPYDACVITGDFRGRTYGPFARTL
                     EVVRDAIGPITTPILGVLGNHDTARIVPGLEALGIRMLMNENKPIERNGSRMWIAGVD
                     DPHHYRTDDLGRALSGIPDSERTVLLAHSTDGLMAAAAAGVSLMLSGHTHGGQICLPG
                     SIPILTGSRMPRRLAQGPWRQGAMHGYTARGVGTSAVDARFNCPPEVVLHTLLCGPHP
                     RRTPTCDAL"
BASE COUNT          734 a         1414 c         1351 g          911 t
ORIGIN      
        1 cgccggaacg gttcgtgctg atgctgcgcg gctatctgac ctttgatttc ggccgcagct
       61 tcttccgcga caagccggtc ctgcaattga tcgaggagaa aatgccagtc tcaatctccc
      121 tcggtctctg gtccacgtta ctggtctact tcatttcgat tcccctcggt atcgccaagg
      181 ccgtccgcga cggcagccgg ttcgacgtcg cgagcagcgc tgccgtcctg atcggttacg
      241 ccgtacccgg atttctgttc gccatcctgc tggtggtgct gttcgccggg ggcagcttcg
      301 tgcagtggtt tccgttacgc ggactgcaca gcgagggctc cgaatcctgg agcatccccg
      361 ctcgcatcct ggactacctc tggcatatcg tcctgccaac catcgcaatc gtggtcggtg
      421 gtttcgccag cctgaccgtg ctgaccaaga actgcttcct ggaggaaatc cgcaagcaat
      481 acgtcgtcac cgcgcgggcc aaaggcgcca gcgaacagcg catcctgtat cgccacgtgt
      541 tccgcaacgc gatgctgctg atcatcgccg gtttcccgtc ggccttcatc ggcatcctgt
      601 tttcctccgc cctgctcgtc gaaatcatct tctccctcga cggcctcggg ctgctcgggt
      661 ttcaggccgc gatccagcgc gactaccccg tcatgttcgg caccctctac atcttcaccc
      721 tgctcggttt gctcatgcag atcgttggcg acatgctcta caccatcgtc gatccgcgca
      781 tcgattttga ggcgaggcaa tagtgcatct ctcgcctctg acccgccgcc gcctggcgat
      841 cttccggtcc cacaaacgcg gttactggtc gctgtggata ttcctggtgt tgttcggttt
      901 cagcctgttc gccgagttcc tcgccaacga ccgtcccttg ctgatcctct acgatggcca
      961 ctggtacgtt ccggtgctgc aagactacag tgaggatacc ttcgggtcca atttcttccc
     1021 caccgacgcg gactacaccg aacccgatgt gcaggcgtcg atcaacgcgc atggctggat
     1081 gatctggccg cccattcgct attcgtacga ctcgatcgtg aaacgcccat cgaccccggc
     1141 gccatcgccg ccggactgga agaatctgct gggcaccgac gatcagtccc gcgacgtcct
     1201 ggcccgcgtg atctatggat ttcgtatctc ggtgctgttc ggcttcaccc tgacggcgat
     1261 ttcgtcggtg atcggcatcg ccgccggcgc catccagggg tttcgcggcg gcctggtgga
     1321 cctgctgttc cagcgcttca tcgagatctg gtccggaatg ccgcaacttt atctgctgat
     1381 catcctcgcc agcatcatca cgccaagttt cggcattctg ctgatcttcc tgctgctgtt
     1441 cagttggatg aacctgaccg gcgtggtgcg cgccgagttc ttgcgcggcc gcaacttgga
     1501 atatgtccga gcggcgaagg cgctgggggt gtcggacctc gcggtgatgt ggcgccacat
     1561 cctgcccaac gccatggtgg cgacgctgac cttcctgccg ttcaccctgt ctggatcggt
     1621 aacgatcctc gccagcctcg atttccttgg cttcggtctc ccccctggat ccccgtcgct
     1681 gggtgaactg gtttcccaag gcaagaacaa ccttcaggcc ccatggctgg gcattaccgc
     1741 gttcgtggtg ctgggcgggc tgctgaccct gctggtgttc atcggtgagg cggtgcgtga
     1801 cgccttcgac ccgcgcaagg ctccgcgtac gggtggaccc agatgagtct cgtctccgtc
     1861 gaggacctga ccgtcagctt cggtggccgc cccgtcgtgg acgccgtcag ctttacgctg
     1921 gatcgcggtg aaacgctggc cctggtcggt gagagcggat ccggcaagtc gctgaccgcg
     1981 ttgtcgctgc tgcagttgct gccgcccggc gcaacctgcg acggccgcgt cgtgatggac
     2041 ggccagagca tgatcggggc cggggacaag gtgctgcgcc gactgcgcgg cggtatcgcc
     2101 ggcatgatct tccaagaacc gatgaccagc ctcaatccgc tgacccggat cggccagcag
     2161 atcgccgagg cggtccaact gcaccagcgg accaccagcg ccgccgccag ggcacgggta
     2221 atcaagctgc ttcatgaggt cggctttccc gacgcggcac accggctcga tgcgttcccg
     2281 caccagcttt ccggtggcca gcggcagcgg gtgatgatcg cgatggcact cgccaacgat
     2341 cccgccttac tgatcgccga tgagcccacg actgccctgg acgtcaccat ccaggcgcag
     2401 atcctgaagc tgctggcagc ggaaaagtcc gctcgtggac tggcattgct gctgatcagc
     2461 catgacctcg cgatcgtgcg ccgatacgcc gaccgggtgt gcgtgatgaa ggacggcgtc
     2521 gtggtggaag ccggaaccgt gtcggacgtg ttcgattccc cccaacattc ctatacacaa
     2581 atgctgctcg ccgccgaacc gcgcggccgc ccacggccgt tgcgtgcggg cgttcccacg
     2641 ttgatgcagg gttcggatgt gaaggtccat ttcgccatcc gccgcggcat cctgcgccgg
     2701 ccggtcggcc atgtccgggc ggtcgatggc gtgaatgtcg ttgttcacga aggcgaaacg
     2761 gttggattgg tgggtgagag tggttcggga aaatccacga tgggctacgc acttctgcgc
     2821 ctggtaaccg ccgatggttg tattcgtttc gatggttcgg acctcgccgg actcgacaag
     2881 aagcggttgc gccggttgcg cgccgatatg cagatcgtct tccaggatcc gttcggcagt
     2941 ctgtcgcccc gcctgaccgt ggcggaaatc atcgccgagg gcctgtccgt gcatgaaccc
     3001 gccttatcgc gcatcgagcg cggcaagcgg gtggcggcgg cgttggagga agtcggtctc
     3061 gccagcacta tcggcgaccg ctatccgcac gagttcagtg gcgggcagcg ccagcgcgtc
     3121 gccatagccc gagccatggt gctgaagcct cggttcgtgg tgctggatga accgaccagt
     3181 gcgctggata tgtcggtgca ggcacagatc gtcgatctgc tgcaacaact gcaacaggat
     3241 catcacttgg gctatttgtt catcagccac gacctgaagg tggtccgcgc cctggcccat
     3301 cgtattgtcg tgctgcgcgg cggcaaggtc gtcgaggaag gccccgccga ggatgttctc
     3361 gcccgcccga ggcacgacta cacaagagcg ctgatggccg ccgcctttac cctggacgcc
     3421 gacgacagcg gcgtggtgcg ggattgattc cagagagtat tgtcataatg tgttcaagct
     3481 tcgatggctt gcctcatctg tgcttcaata tcggcccgga ttgtccgaac taatccgatg
     3541 cgttgatctg tcataaggca tcacaggtgg gggtcctgcg tggatgcggt ccacacagaa
     3601 gggtgtgcag gaccacttcc ggcggacaat tgaagcgcgc atccacggcg ctggtaccca
     3661 caccacgggc ggtgtagccg tgcattgccc cctggcgcca cggtccctgg gcgagcctgc
     3721 gtggcatacg agagcccgtc aggattggta tggaacccgg gaggcagatc tggcccccgt
     3781 gggtatgacc ggacagcatc agagacacac cggcggccgc ggcagccatc aggccgtcgg
     3841 tgctgtgcgc cagaaggacc gtccgctcgc tatcgggaat tccagagagc gctctcccaa
     3901 gatcgtcggt gcggtaatga tgagggtcgt ccacacccgc gatccacatc ctcgacccat
     3961 tccgttcgat cggcttgttc tcgttcatca gcatgcggat ccccaatgcc tccagaccgg
     4021 ggacgatgcg ggccgtgtcg tggtttccga gaacacccaa gataggggtc gtgatcggac
     4081 cgatggcatc ccgcacgact tccagcgtcc tggcgaacgg tccataggtc cggcctcgga
     4141 agtcgccggt gatgacgcag gcgtcgtaag gcaaggtccg aatcacttcc ggcagcgcgc
     4201 ccatcgccct gaggctgata tccgcgtgca agtcggtgat gtgcagcagg gtgtaaccgt
     4261 ggaaggcgcc cgggaggtcc gggatttcga caaagttccg cgtcacctga atccgcgcag
     4321 cgttggcctg tcctcgatcc agcatattgg ccgccttcag cagacgtgcg acgtaccact
     4381 ccacgagagc ccaaaaggag aaatcggcat
//
LOCUS       DATAVD010000077         1862 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3544082, whole genome shotgun sequence.
ACCESSION   DATAVD010000077 DATAVD010000000
VERSION     DATAVD010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1862
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3544082"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            80..1192
                     /locus_tag="VHX39_01370"
     CDS             80..1192
                     /locus_tag="VHX39_01370"
                     /inference="COORDINATES: protein motif:HMM:NF025627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfotransferase family protein"
                     /protein_id="HEX3989798.1"
                     /translation="MLRYDPARAQPGYTLYTLTPDLSAHLIDMNGREVHKWFLPKDQA
                     IPGVNGVRTLFGLLEPQIEGGYLYPNGDVIMVYEARAVGPPATVLIKLDKDSHLLWRS
                     NVSVHHAIEIVGDKIYALTADIATRPLTRHRSVPFVGETLSIMDSAGKTLNTHSIIDA
                     MANTKDMRIADLTNYTDPLDPLHSNSLDVLTEQTAHFIPGAKPGNVLLSIRNLDLLMV
                     MDLESDTIVWALRGSWRKQHDAKMLPNGHILMFDNEGGLMTYSPSRVLEIDPGTGGIV
                     WSYTGKADDPLESADNRGGAQRLANGNTLINEANSGRLLEVTPDGAVVWEYVNPLQDT
                     ERGKKIIASFGLSVTRYDASYVAFLGGGGASHAALP"
     gene            1176..1481
                     /locus_tag="VHX39_01375"
     CDS             1176..1481
                     /locus_tag="VHX39_01375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989799.1"
                     /translation="MRRCPELLLWALFASIPLALIPNPAAAYLGPGGGLSLFTTALAM
                     FAAFSVSVGVVVTRQVRAVKAWFQRRRHKGKPDGKGDEHGPTEDESEHGAGRSRPES"
     gene            1507..>1862
                     /locus_tag="VHX39_01380"
     CDS             1507..>1862
                     /locus_tag="VHX39_01380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX3989800.1"
                     /translation="MEGRLLADRLAATAIDRPVFVAGLARAGTTIVLRTLSEASEFAT
                     HRYADFPFLFTPYAWARLRRLMPARRQEPRERMHRDGIMVTAESPEAMEEVLWMAFFP
                     RLHDPAVSNVLDEDER"
BASE COUNT          356 a          578 c          579 g          349 t
ORIGIN      
        1 caccggcagg acaattctcc agttcttcag caagaccgcg actttcaact ggtttcccga
       61 tcgtttcgac cgatccggat tgctccgcta tgacccagcc cgcgcccagc cgggctacac
      121 gctctacacg ctcacacccg acctgtcggc acatctcatc gacatgaacg gccgcgaggt
      181 ccataaatgg tttctgccga aggatcaggc gataccgggc gtcaacgggg tgcgaaccct
      241 gtttggccta ctagaaccac agattgaagg cggatacctg taccctaatg gcgatgtgat
      301 aatggtctat gaggctaggg ccgtggggcc tccggccacg gtgctgatca aactcgacaa
      361 ggactcccac ctgctgtggc ggagcaacgt cagcgttcat cacgccatcg agattgtcgg
      421 cgacaagatt tacgcattga ccgcggacat tgcgactcgg ccgctgacgc ggcatcgcag
      481 cgtcccgttc gttggcgaga ccctgagtat tatggactcc gccggcaaga ccttaaatac
      541 gcactcaatc atcgacgcga tggccaacac caaagacatg cgcatcgccg atctaacgaa
      601 ttacaccgac ccgctggacc cgttgcactc caattcgttg gacgtgctca cggagcagac
      661 cgcgcatttt attccgggtg ccaagccggg caatgttctc ctgtcgatac ggaacctgga
      721 cctgctgatg gtgatggatc tggaaagtga caccattgtt tgggcgcttc gcggctcctg
      781 gcgcaagcag catgacgcca agatgctgcc gaatgggcac atcctgatgt tcgacaacga
      841 aggcggcctg atgacataca gcccgtcgcg ggtgctggag atcgatcccg gcaccggcgg
      901 catcgtgtgg tcctacaccg gcaaggccga cgacccgctt gagagcgccg acaatcgtgg
      961 tggcgcgcag cggctggcca acggcaacac cctgatcaat gaggccaatt ccggccgcct
     1021 gctggaagtg acgcctgatg gcgcggtggt gtgggaatac gtcaatccgc tccaggacac
     1081 agaacgcggc aagaagatca tcgcatcgtt tggattatcc gtgacccgct acgatgcttc
     1141 ctacgtggcg tttctcggcg gcggcggggc gagccatgcg gcgctgccct gagctgctgt
     1201 tatgggcact gttcgccagc attccgctgg cactgatacc taatccagcg gcggcctatc
     1261 ttgggccggg agggggtcta tcgttattca ccaccgcgct ggcgatgttc gctgcgttct
     1321 ccgtctcggt cggggtggtg gtgacgcggc aggtgcgcgc cgtgaaagct tggttccagc
     1381 gccgccgcca caagggaaaa cccgatggga agggcgacga gcacggcccc acagaggacg
     1441 aatccgagca cggcgctggc cgctctcgtc ctgaatcata gcgacgcgtg gcgcgccctc
     1501 agtaacttgg aaggccggct gctggcggat cggcttgctg ccactgcaat cgaccggccg
     1561 gtgtttgtcg cagggctcgc tcgtgcgggc acgaccatcg tgctccgcac attgagcgag
     1621 gcgagtgagt tcgccactca ccgctacgcc gatttcccat ttctgttcac gccctacgcg
     1681 tgggcgcggt tgcgccggct gatgccggct cggcggcagg agccgcgcga acggatgcat
     1741 cgggacggca tcatggtcac cgccgaaagc ccggaagcga tggaggaggt gctgtggatg
     1801 gccttcttcc cgcggctcca cgatcccgcg gtcagcaacg tgctggacga ggacgagcgg
     1861 ca
//
LOCUS       DATAVD010000078         4487 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_379691, whole genome shotgun sequence.
ACCESSION   DATAVD010000078 DATAVD010000000
VERSION     DATAVD010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4487
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_379691"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            143..1288
                     /locus_tag="VHX39_01385"
     CDS             143..1288
                     /locus_tag="VHX39_01385"
                     /inference="COORDINATES: protein motif:HMM:NF017770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF898 family protein"
                     /protein_id="HEX3989801.1"
                     /translation="MDRPSAAGTNSRDAVAGLVYDGKLSELFGIFLFNLPLTIITFGI
                     FHCWTVTRMRRYMWSHMRFEGTPFRYTGRGKEMLQGFVLALLILILLFASAAVAEEAL
                     KKSHPIQARLPFATAFVGMVVLFGATRFASLRYRLSHTEWCGISGGIYGSALRYGASW
                     MIYLLVCVLTFAQAVPWMQVGLARSRIDASHFGSAEFHWDGRGWPLYLSWLAMMFGHI
                     VLFGVIVAIVAGFEAPWLAHVLLGKSSGPIAHSVAFQVTPAAVGGLVFMVGSAILVTS
                     YQAKCRLLILGNITAIVRGRFRNETLQFGTTAEVDGLTWLVFTNLAIMMLSLGLGLPI
                     VLHRNASFTARTTYVTGIFDANTLAQGTMAPATFGNGFVQTLDPGMI"
     gene            1419..3410
                     /locus_tag="VHX39_01390"
     CDS             1419..3410
                     /locus_tag="VHX39_01390"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEX3989802.1"
                     /translation="MRLLVVILLVLGFAAPLAAAPPQNPQPVQNPQLLQNPLSYVQAG
                     QWTEARAAAAQSSDPVAVKLIDYLRILTPNAARASEIDTFMRQNPDWPLLGLMARRRH
                     EAMATETDDAALGVLCTEPDPVPTPAVTHGFSYPFPMPARGAALLRCAEALSDLGRAA
                     EATAMARDAWISAISDPATEAEFTRRFPDLISPADQWTRFQRLAWGDAIAAQRQIANL
                     DPAHAALAQARLGLKANIPGPTGPPDEDPGAMLDLARAYRKLAQDQAAVALWRSAGVA
                     AQKAAPAAHLPAFWTERQYLAHQLLRDGDAQDAYDLVAANGQTEPEMVAEAEFLAGFI
                     ALRRLNNPADAVRHFNALAAASHAVLTQSRASYWLGRAQTAMGRNAVEDYLAAATWPT
                     TFYGQLAHRAAGQPDAALVAKLRVPPTPTPGLESTPATLELARAAVQLITWGDARHAR
                     SFLLRMDELAHTPEARVGVANYAAALALPDVTVIVVRRLGRDGVMPPLQGWPIAVEPP
                     PIPEPAVSLAIMRQESNFDIGIISPSGARGLMQLMPGTARLVAHRLGEPTSNELLTTD
                     PEHNMRVGTAYLQQMLEQFGGFVPLAAAAYNAGPNRVNEWLAENGDPRVANQSMIDWI
                     ELIPFNETRNYVQRVLENVVVYQARLYGTLPPTMAQWSR"
     gene            3398..4237
                     /locus_tag="VHX39_01395"
     CDS             3398..4237
                     /locus_tag="VHX39_01395"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3989803.1"
                     /translation="MEPLIQTVTAWDGLSLCVRIWNGGYRLPPVLCLPGVVRTGADFD
                     TVVPLFGDGRTVVAVDYAGRGGSARSSDVMRYAPEACLRDVMDVCAALHLHHVTIIGT
                     SFGGLLAMGLAAARPALVRGVVLNDVGPDIGTAGAGFVRDFVALDPALPDLDACVTFL
                     RQRLPPMSFSTEADWRTMAVLTYERGRDGRFHPMWDTRIARLLQRPPEDLWPLFGALA
                     HVPVLLVHGALSTILLPETVAAMQARRPDMTVVTVPDVGHAPVLNEAAVRDRLCAFIA
                     GLD"
BASE COUNT          752 a         1357 c         1446 g          932 t
ORIGIN      
        1 acctggctgt gccacgaaac cgacatatgt gtgtaacgat tttccgcaca aattgcgagg
       61 agttgcgtta ttggacgcag cccgcgcgcc gcgatgaagt cgggctgacg gtcgacacaa
      121 gggacatttg gagaccctgg caatggaccg gccgtccgcc gctggcacaa actcgcgtga
      181 tgccgtggcg gggttggttt acgatggcaa gctgtccgaa ttgtttggca tcttcctgtt
      241 caatctgcca ctgacaatca tcacctttgg catttttcat tgttggacgg tcacccggat
      301 gcgccgctac atgtggtcgc atatgcgctt tgaaggcaca ccgttccgct acaccggcag
      361 aggcaaggag atgcttcagg gcttcgttct ggcactgctg attctgatac tcctgttcgc
      421 cagcgcagcc gtggctgagg aagcgttgaa aaagtcccac ccaatccagg cccggcttcc
      481 cttcgccact gctttcgtcg gaatggtcgt cttgttcggc gccacgcgtt tcgcctcgct
      541 gcgataccgc cttagccaca ccgagtggtg cggcataagc ggtggcattt atggctcggc
      601 actgcgctac ggcgcgagtt ggatgatcta cctgctggtg tgcgtgctga cgtttgccca
      661 ggcggtaccc tggatgcagg tcggtctcgc acgatcgcgg atcgacgcca gccatttcgg
      721 ttcggcggag tttcactggg acggacgtgg gtggccgctt tatctctcgt ggctggccat
      781 gatgttcggc catattgttt tgtttggcgt gatcgtggca atcgtcgccg ggttcgaagc
      841 tccctggctg gcgcatgtcc tgcttggcaa atccagcggc cccatcgccc attccgtggc
      901 atttcaggtg acgccggctg ctgttggcgg tctggttttc atggtcggct cggcaatact
      961 cgtgacctcg taccaggcca aatgccggtt gctgatcctg ggcaatatca ccgcgatcgt
     1021 tcgcggcagg ttcaggaacg aaacgcttca gtttggcaca acggcggagg tggacggtct
     1081 gacatggctg gtcttcacca acctggcgat tatgatgcta agcctcggtc tgggcttgcc
     1141 catcgtgctg caccgcaacg cgagtttcac ggcccgaaca acctacgtga cagggatatt
     1201 tgatgccaac acgttggcgc agggaaccat ggcgcctgca actttcggta atggtttcgt
     1261 gcagaccctg gatcccggaa tgatttagcg gaccgagtaa ccatacaatg cttgaaaatg
     1321 ccgtcatgcg gacgccgttg gtgatcgaag cgaaccgccg gcaccggttc ggaaatcgga
     1381 tttcgcccat cgggcatcca atggactatt attgtcgcat gcgcctcctc gttgtgattc
     1441 tgctggttct gggctttgcc gctccgctcg cggcagcgcc gccgcaaaat ccccagccgg
     1501 tgcaaaatcc ccagctgctg cagaatccgc tgagttacgt ccaggccggg caatggacgg
     1561 aagctcgggc agcggcggcg caaagtagcg atccagtggc cgtgaagctc attgattatc
     1621 tccgtatcct gacgccgaac gccgcacgcg cctccgagat cgatactttc atgcggcaaa
     1681 accctgactg gccgttgttg ggtctgatgg cacgccggcg ccacgaagcg atggccactg
     1741 agaccgatga tgcggcgctt ggcgtgctgt gcaccgaacc ggaccccgtg ccaacgccgg
     1801 ccgtcacgca cggtttcagt taccctttcc caatgcccgc gcgcggcgcc gcgctattgc
     1861 gttgcgccga ggcgttgtcc gatctgggcc gtgccgccga ggccactgcg atggcccgcg
     1921 atgcctggat ctcggccatt tccgacccgg cgaccgaggc agagttcacc cgccgcttcc
     1981 ccgatctgat ctcccccgcc gatcaatgga cccggttcca gcggcttgcc tggggcgatg
     2041 cgatcgccgc acaacgccag atcgccaatc tcgatccggc gcacgcggcg ttggcacaag
     2101 cccgcctcgg actgaaggcc aacatccccg gaccgactgg ccctcccgat gaggacccgg
     2161 gggcgatgct cgatctcgcg cgggcctatc gcaagctcgc ccaggatcag gccgcggtgg
     2221 cattgtggcg atcggcgggc gtcgcagcgc agaaggcagc gccggccgct catctgccgg
     2281 cattttggac cgagcggcaa tatctcgcac accagttgtt gcgcgatggg gacgcccagg
     2341 acgcgtatga tttggtcgct gcgaatgggc agaccgagcc ggagatggtg gcggaggcag
     2401 agttcctcgc cggcttcatc gctttgcgcc ggctcaataa tccggccgac gcggtgcggc
     2461 atttcaacgc gctcgcggcc gcctcgcacg ctgttctgac gcagtcgcgg gcgtcgtact
     2521 ggctgggccg agcccagacc gcgatgggtc gcaatgccgt tgaagattac ctggccgctg
     2581 ccacctggcc gacgacattt tacgggcagc ttgctcaccg cgccgccggt caacctgacg
     2641 cggctctggt ggccaaattg cgggtcccgc ccacgcccac gcccggtctg gaaagcaccc
     2701 cggcgacttt ggagttggcg cgcgccgctg tgcaattgat cacctgggga gatgcacggc
     2761 acgcaagatc atttttgctg cgcatggacg aactcgccca cacgccagag gcgcgcgttg
     2821 gagtggccaa ttatgccgcc gcactggcgc tgcccgacgt aaccgtcatc gtggtcaggc
     2881 ggctaggtcg cgatggcgtg atgccgcccc tgcaaggttg gccgatcgcg gtcgaaccgc
     2941 ctccgatccc ggagcctgcc gtgtcgcttg cgatcatgcg ccaggagagc aatttcgata
     3001 tcggcatcat cagtccctcc ggcgcgcgtg gactgatgca actgatgccg ggaacggcgc
     3061 ggctggtggc gcatcggctc ggtgagccga cgtccaacga gctgctgacc accgatccgg
     3121 agcataacat gcgggtggga acggcgtatt tgcagcagat gctggagcag tttggcggtt
     3181 tcgtgccact ggcggccgct gcctataacg ccgggccgaa ccgcgtgaac gagtggctgg
     3241 ctgagaacgg cgatccccgc gtcgccaatc agagcatgat cgactggatc gaattgatcc
     3301 cgttcaacga gacgcggaac tacgtgcagc gcgtgttgga aaatgtcgtg gtctatcagg
     3361 cgcggctgta cggaacgcta ccgccaacga tggcgcaatg gagccgctga tccaaacggt
     3421 taccgcctgg gacgggttgt cgttgtgtgt gcggatctgg aatggcggct accggttgcc
     3481 tccggttttg tgcctcccgg gtgtggtgcg aaccggagcg gatttcgata cggtcgtgcc
     3541 attgtttggt gacggacgta ccgttgtggc ggtggattac gccggacgtg gcggctccgc
     3601 gcggtcgtcg gatgtcatgc gttacgcgcc ggaggcttgc ctgcgtgacg tgatggatgt
     3661 ttgcgcggcc ctgcatctgc accatgtcac gatcatcggc accagctttg gcggattgtt
     3721 ggcgatgggg ttggcggcgg cccggccggc gttggttcgc ggcgttgtgt tgaatgatgt
     3781 cgggccggac atcggcactg cgggcgccgg gttcgtgcgc gatttcgttg ccctggatcc
     3841 ggcgttaccg gacctcgatg cctgtgtgac gtttctgcgc cagcggctgc cgccgatgtc
     3901 gttttcgacc gaagccgact ggcggaccat ggcggtgttg acctacgagc gaggccggga
     3961 tggacgattt catccgatgt gggacaccag gatcgcacgg ctgttgcaac ggccgccgga
     4021 ggatttgtgg ccactgttcg gagcgttggc gcatgtgccg gtgctgctgg tgcatggtgc
     4081 actcagcaca atcctgctgc ccgagacggt ggcggcgatg caggcccggc gtccggacat
     4141 gacggtcgtg acggtgcctg acgttgggca cgcgccggtg ctgaatgaag ccgcggtgcg
     4201 ggacaggttg tgcgcattca ttgccggttt ggattgagcg cagcacccgc ggctctatct
     4261 gggccagatc gccgcgccgt tcctgtccaa ccgatggggg ccacctcacc tcgcaggcgc
     4321 tttaagtacg gaggcttcgc tttaacccaa agatcattga gacgactgat ttcgtctttc
     4381 ccgattatat gcgtcagtga acccgtccgc gtgaaaacct ctgaaacaaa cgccatttat
     4441 tttttagcag gcgcagacgc ccaaccaggc aggcttggga acctgat
//
LOCUS       DATAVD010000079         5531 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_565288, whole genome shotgun sequence.
ACCESSION   DATAVD010000079 DATAVD010000000
VERSION     DATAVD010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5531
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_565288"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(288..1505)
                     /locus_tag="VHX39_01400"
     CDS             complement(288..1505)
                     /locus_tag="VHX39_01400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3989804.1"
                     /translation="MSISRRVLLGSAAAVSVPLVRPRAQGKPVIRLGVLTDLSGTYRD
                     NTGPTSVAAAQLAIDEMKPHLDFDVTLTSADHQNKPDVAATLARQWFDQGIDAAIDVP
                     TSSVALAVAEVAKEKDKMMLNASATVAALTDAQCSPNSIVWSFDTYENAQSTGGTLVK
                     QGFKDWFFITANYAFGQSLEELTAAVVKKGGGTVKGAVRYPFPDTTDFSSFLTQAQSS
                     GAKVLGLANAGLDTQNCIKQAHEFGIDKSMKIAPMLLFLQDAHAVGLDICGGTTVTET
                     FYWDLNDRTRAFTKRLVARTPRNYPNQAHASAYAITLHYLKTAQKLGAAAAQKSGRAT
                     IAAMKSIPTDDDAFGAGKIRADGRGEFPAYLFQVKTPAESKGEWDLYKLVAKVPVEEV
                     LHPLNDKCKFPTT"
     gene            complement(1578..2297)
                     /locus_tag="VHX39_01405"
     CDS             complement(1578..2297)
                     /locus_tag="VHX39_01405"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HEX3989805.1"
                     /translation="MNAMFHIQHHERIGSTSDEARRLAAAGAPHGTVVHADEQAAGRG
                     RLGRTWFSPPGNLYLSVLLRLAVPPDRNPELHFVTALTVADAIDALLPKQSRATLKWP
                     NDVLVNDGKIAGILLESAEDAQIIGIGVNVLEAPRNAPYKTATLVGAGGIATVDGARD
                     ILLDSLAKHLAAWTEHGFDPIRTAWLGRAHPIGTVLRASIGGQSEEGEFAGLDERGAM
                     LLDTAEGRKRIDLSEAIAPSA"
     gene            2494..3000
                     /locus_tag="VHX39_01410"
     CDS             2494..3000
                     /locus_tag="VHX39_01410"
                     /inference="COORDINATES: protein motif:HMM:NF025078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4157 domain-containing protein"
                     /protein_id="HEX3989806.1"
                     /translation="MRRSLFLAPFAWALPAQAQTAIPPSLLERGSGLLAELIQSGREA
                     AIANGVRPMPPRVHSALLGYFPDAMLRKVRFASGHADTITIPGLAMTYGHIDAVTLVD
                     VILFRDDDAARNDAKLWAHELTHVMQYERWGVEGFAMRYLQDSDSVEQEARDNAQRFV
                     AWSEHAHL"
     gene            complement(3016..4068)
                     /locus_tag="VHX39_01415"
     CDS             complement(3016..4068)
                     /locus_tag="VHX39_01415"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
                     /protein_id="HEX3989807.1"
                     /translation="MTPNTRRVFYVKYLPSAVYATVLAKRPDVQLDKLENDSPADLAE
                     PILTQAHLYQIGASRQIIAPHFQVNAALLARTPNLIAASSNGAGYDTIDVDACTAAGV
                     ACVNQSGGNKEAVAEHALAMMLTLSKHIVEANRQARTGQPIDRGTYIGRELNGRTLGV
                     LGIGNVGGRLTAICRAAFNMRVLAYDPFLSAEQIKSRGAEKVELDELLTQSDYVSVHC
                     PLTRQNRKMMGAAQFARMKPEAYFITTARGFIHDEDALAGALANKQIAGAGLDVWEDE
                     PPPHDHPLMAFDNVMVSPHIAGSTIEARENMGRIAAEQSLDILDGKKPPRLINPEVWP
                     AYRERFARIMGFTPEP"
     gene            4132..5439
                     /locus_tag="VHX39_01420"
     CDS             4132..5439
                     /locus_tag="VHX39_01420"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX3989808.1"
                     /translation="MTLAPRSPRPGTLPPGTLPPGLYRETARAAPETPALDGDCKVSV
                     AIVGGGFTGLSTALHLAERGVDVAVLEHHEPGWGASGRNGGQVNPGLKPDPDQVEADF
                     GPDLGARMVALSGNAPNVVFELIERHQIVCEALQSGTLRAAMHNRAQNGVRATAEQWM
                     RRSSLVSLLDREVISGLTRTDRYVGALLDRRGGQLNPLGYARGLAAAAMRAGAAVFGG
                     TTVLRIGRNEGTWKLTTATGTVTAEKIVLATNGYTGDLWPGLRRSIVPVYSAIVASEP
                     VPDDVMPTRSSLYEMGNITVYYRKDRDNRILMGGRSVQRDVSRPEELRYLIDYAVRLW
                     PALRGVRWTHAWSGQLAITTDHYPHIHEPYETVLVCLGYNGRGVAMSTAMGVELARRA
                     IGGRNAEIAMPITGIKQIPLHGLWKSAVEARVVYGRVRDFLGL"
BASE COUNT          955 a         1789 c         1736 g         1051 t
ORIGIN      
        1 gcgtgccaac tcagaccgcc ataagttcgc gcgtatgggg ctccgccctc agacccgcca
       61 ggggctttgc cccctggacc cccagcaaag gtcgaggacc tttgcaatct gtccattggt
      121 tggggaatgg gagagagccg acacagacct tgaaaagcgc cacagtcggc cctctcccat
      181 tccccaacca aaatgaatgg ttccaagggc cgctgccctt ggcggggtcc aggggcagcg
      241 gccctggtcg gggttcgggg tgaaaccccg ccgctacccc gccccgttca ggttgtcgga
      301 aacttgcact tatcgttcag cggatgcagc acttcctcga ccggcacctt ggccacaagt
      361 ttgtagagat cccactcgcc cttactttcg gccggcgttt tcacctggaa caaataggcc
      421 ggaaattccc cacggccatc agcgcggatc ttgcccgcac cgaacgcgtc atcatccgtc
      481 gggatcgact tcatcgctgc tatcgtggca cgcccgctct tttgcgctgc cgccgcaccg
      541 agcttttgtg ccgtcttcag gtagtgcagc gtgatcgcat aagcactcgc atgcgcctgg
      601 ttggggtagt tcctcggcgt tctcgccacc agccgtttgg taaacgcgcg agtgcgatca
      661 ttcaggtccc agtagaacgt ttccgtcacc gtggtgccgc cgcaaatgtc gagacccacg
      721 gcatgcgcgt cctgcaggaa caacagcatc ggcgcgatct tcatgctttt gtcgatacca
      781 aactcatgcg cctgcttgat gcagttctgc gtgtccagac cagcgttggc cagccccaat
      841 accttggcgc cgctcgactg cgcctgggtc aggaacgacg agaagtcggt ggtgtccggg
      901 aatggatagc gcaccgctcc cttcaccgtc ccaccgcctt tcttgaccac cgcggcggtc
      961 aattcttcca aggactgacc gaacgcatag ttggcagtaa taaagaacca gtccttaaaa
     1021 ccctgcttca ccagtgtccc acccgtcgac tgggcgttct catacgtgtc aaaactccag
     1081 acaatcgagt tcgggctgca ctgtgcatca gtcagcgccg ccaccgtggc cgacgcgttg
     1141 agcatcatct tgtctttttc tttcgccacc tcggcaaccg ccagcgccac cgacgaggtc
     1201 ggcacgtcga ttgccgcatc gatcccctgg tcgaaccact gccgtgcgag ggtcgccgcg
     1261 acatccggct tgttctgatg gtcggcgctg gtcaacgtga catcgaaatc gagatgcggc
     1321 ttcatttcgt cgatcgccaa ctgtgcggcg gcaaccgagg tcgggccggt attgtcgcga
     1381 taggtgccgg agaggtctgt cagcaccccc aaccgtatga ccggtttccc ttgcgcgcgg
     1441 ggacggacca gcgggacgga cacggcggcg gcgctgccga gcaacacccg gcgggaaatt
     1501 gacatttgga cgttctccgg aaattcagcc gcaccaacgc ggttgcggcg ggttctaccg
     1561 gaggcgcccg aagtaactca agcactgggc gcaatcgcct cgctgaggtc gatgcgcttg
     1621 cgtccctccg cggtgtccaa cagcattgcg ccgcgttcgt cgaggccggc aaactcgcct
     1681 tcctcggact ggccgccaat actcgcccgc agcaccgtgc cgatcgggtg ggcgcgtccc
     1741 agccacgccg tgcggatcgg atcgaagcca tgttcggtcc aggcggcgag gtgctttgcc
     1801 aggctgtcga gcaggatatc ccgcgcgcca tccaccgtgg cgatgccgcc ggcgcccacc
     1861 agggtcgcgg tcttatacgg cgcgttgcgc ggtgcctcca gcacgttcac gccaatgccg
     1921 atgatctgcg cgtcctcggc gctttccagc agaatgccgg cgatctttcc gtcattgacc
     1981 agcacgtcgt tgggccattt caaggtcgcg cggctctgct tcggcaacaa cgcgtcgatg
     2041 gcgtcggcca ccgtcagcgc cgtgacgaag tgcaactccg gattgcgatc cggcggcacc
     2101 gcgagccgca gcagcaccga cagatagaga ttgcccggcg ggctgaacca ggtgcggccc
     2161 agacggcctc gtccggcggc ctgctcgtcg gcatgcacaa cggtgccatg cggcgcgcct
     2221 gcagccgcaa gacgccgcgc ctcgtcgctg gtcgacccga ttcgctcgtg gtgctgaatg
     2281 tggaacatgg cgttcattcg ctggtccgca caatcgcccg cagaaacgag cgtgcgattt
     2341 tgcccggttc tgtgccagaa tgtgtggaca aggcgcccag ggccgatccg atcatggccc
     2401 acatgccaca tttcagtcgc ggaattgccg caagcgatcc caatgtcatc tcggaccccg
     2461 tctcattcca gctctgattc aaggaacctt ctcgtgcgtc gctcattgtt tctcgcccct
     2521 tttgcctggg ctttgcccgc ccaggcgcaa acggccatcc caccgtcctt gttggaacgt
     2581 ggctccgggt tgcttgccga gctgatccaa tccggcagag aggccgccat cgccaatggc
     2641 gtgcggccga tgccgccgcg ggtccacagc gcgctgctgg ggtatttccc tgatgcgatg
     2701 ctgcgcaaag tgcgctttgc cagcggtcac gccgatacca ttacgatccc tggcctggcg
     2761 atgacctacg gtcatatcga cgcggtgacc ttggtcgacg tgatcctgtt ccgggacgat
     2821 gatgcggccc gcaacgacgc caaactctgg gcgcatgaac tcacccatgt catgcagtat
     2881 gagcgctggg gggtcgaggg gttcgcgatg cgctaccttc aggattccga ttccgtcgag
     2941 caggaagccc gcgacaacgc ccaacgattc gtggcctgga gcgagcacgc gcatctttga
     3001 ccacccccaa cccgttcatg gttccggagt aaaacccatg atccgggcaa atcgttcccg
     3061 ataggcgggc cacacctccg ggttgatcag ccggggaggc ttcttgccgt ccaaaatatc
     3121 cagcgactgt tcggcggcga tccggcccat attctcccgc gcctcgatcg tcgagccggc
     3181 gatgtgcggg ctgaccatca cgttgtcgaa cgccatcagc gggtggtcgt gcggcggcgg
     3241 ctcatcctcc cagacgtcca ggccggcgcc ggcaatctgt ttgttcgcca gagcgccggc
     3301 caacgcgtcc tcgtcatgga tgaagccgcg ggcggtggtg atgaaatagg cttccggctt
     3361 catgcgggcg aactgcgccg cacccatcat cttgcggttc tgcctggtca gcgggcaatg
     3421 cactgacacg tagtcggatt gggtcaggag ttcgtccagt tccacctttt ccgcgccgcg
     3481 cgatttgatt tgctcggcag acaggaacgg gtcgtaggcc agcacccgca tattgaaggc
     3541 ggcacggcag atcgctgtca gccgtccacc gacattgccg atgcccagta cgccaagtgt
     3601 gcggccgttc agctcgcggc cgatgtaggt cccgcgatcg atcggctggc cggtacgggc
     3661 ctgccggttg gcctcgacga tgtgcttcga caaagtcagc atcatcgcca gcgcatgctc
     3721 ggcgacggct tccttgttgc cgccggactg gttgacgcag gcgacgccgg ccgcggtgca
     3781 ggcatccacg tcgatcgtgt catagccggc gccgttcgag gacgcggcaa tgaggttcgg
     3841 ggtgcgcgcc agcaacgcgg cattgacctg gaaatgcggc gcaatgatct gccgcgaggc
     3901 gccgatctga tacagatgcg cctgcgtcag aattggctcg gccagatcgg cgggactgtc
     3961 gttttccagt ttgtccagtt gcacgtcagg ccgcttcgcc agcaccgtcg catacacggc
     4021 agacggcagg tattttacat agaacacccg cctggtattc ggcgtcatgc tggttccctc
     4081 cggaaatcct ggtcacgcta gcatagagtc acgaaaggcg agaaaccccc tatgaccctg
     4141 gcgcccagga gcccgcgacc cggaacgtta ccgccgggaa ccttgccacc aggcctgtat
     4201 cgggaaaccg cacgggcagc gccggaaacc cctgcgctcg acggcgattg caaggtctcg
     4261 gttgcgattg tcgggggtgg gttcaccggg ttgtcgaccg ctctgcacct cgccgaacgg
     4321 ggggtggacg tggcggtgct ggagcaccat gagcccggct ggggggcctc gggccgcaac
     4381 ggcgggcagg tcaatccggg cctgaaaccc gacccggatc aggtcgaggc cgactttggc
     4441 cccgacctgg gcgcgcgcat ggtggcgctg tcggggaatg cgccgaacgt cgtgttcgag
     4501 ttgatcgaac ggcatcaaat tgtctgtgag gcgttgcagt ccggcacgtt gcgcgcagcc
     4561 atgcacaatc gggcacagaa cggcgtgcgc gcgaccgcgg agcaatggat gcggcgcagt
     4621 tccttggtga gtctgctgga tcgcgaggtc atttccgggc tgaccaggac ggatcgctat
     4681 gtcggtgcgc tgttggaccg gcggggtggg cagctcaatc cgcttggcta tgcgcgaggc
     4741 ctcgcggccg ctgcgatgcg tgccggcgcg gcggtgtttg gcggcacgac ggtgttgcgg
     4801 attggccgga acgaggggac ttggaagctg acgaccgcca ccggcacggt gaccgccgag
     4861 aaaatcgttc tggcgaccaa tggttacacc ggcgacctct ggcctggcct gcgccgcagc
     4921 atcgtgccgg tttattccgc gatcgttgca agtgagccgg tgccggacga tgtcatgccg
     4981 acccgttcat cattgtacga gatgggcaac atcacagtgt attaccggaa ggatcgcgac
     5041 aaccggatcc tgatgggcgg ccgcagcgtg cagcgcgacg tgtcgcggcc cgaagaattg
     5101 cgctacctga tcgactacgc cgtccggctt tggccggcct tacgcggggt gcgctggacg
     5161 catgcgtgga gtgggcaatt ggccatcacc accgatcact acccgcacat ccacgagcct
     5221 tacgaaaccg tcctggtctg cctcggctat aacggccgcg gcgtggcgat gagcacggca
     5281 atgggtgtgg aactggcacg ccgcgcgatt ggtgggcgga acgccgagat cgccatgccg
     5341 atcaccggga taaagcaaat cccgttgcac ggactgtgga agtccgcggt cgaggcacgc
     5401 gtcgtgtatg gcagggtgcg cgactttctg ggtctctgat ccaatcgagc gatcgatcag
     5461 gcctgcacca tccggccact ccgccgggcg cgccactcgc tggccaggcc cattgccgcc
     5521 gtcagcgcca t
//
LOCUS       DATAVD010000080         1821 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1310123, whole genome shotgun sequence.
ACCESSION   DATAVD010000080 DATAVD010000000
VERSION     DATAVD010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1310123"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(206..1630)
                     /locus_tag="VHX39_01425"
     CDS             complement(206..1630)
                     /locus_tag="VHX39_01425"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX3989809.1"
                     /translation="MDAVIELARPPARLAGQLCRPPAPEPQPAPLGLFRLLRVLKSNP
                     IECWADEHFEQPVSIASRLLGHVVLLNEPTAIRRVLLDHASNYRKDSLQRRVLSAGLG
                     YGLLSAEGEQWQEQRRILAPMFSHRMVGCFTPAIMQAAAALVARWHALSAQESQVDVA
                     AEMTRLTLDVLVRTIFSDGLGCDSEQLRSAMSTYFEVIGRIDPLDLLGAPDFIPRFGR
                     WRARPAMRFFDAAIDKIIATRRHRLARDPDDVPQDLLTLLLNALDPDTGRRMTEAEVR
                     SNILTFIAAGHETTANCLSWSLYLLSRSPDWNERVAAEAVRETDSPISEMADRLVLTR
                     AVIDESLRLYPPIAAISRVAKGPDELAGVAIKRGSMVVIAPWVLHRHRRLWRDPDHFD
                     PNRFLGGARAGIDRFAWLPFGAGMRTCIGATFALREATLVLATIMKHFSLVPVHGHAV
                     WPLLRVTLRPGNGLPMTVTPRHCN"
BASE COUNT          378 a          579 c          552 g          312 t
ORIGIN      
        1 aatacgaccg cctcggacaa cgccccacag tctgctgtcg tgtcgtccat aactgttccc
       61 ccaaccgaat ccagagggtc gtcatagatt caacgtttca gcggtttgtc acgtacttct
      121 tcacccgatt gccgtgcggt gcaaccccgt gtgccgggac ccgctgacgg acccgcacat
      181 catcgctcgc aagccaaccg gctgatcagt tgcagtgccg cggggttacc gtcatcggca
      241 gtccatttcc cgggcgtaag gtcacccgta gcagcggcca aacggcatgc ccgtgcacag
      301 gcacgaggct aaagtgtttc atgatcgttg cgaggaccag ggtcgcctcg cgcaatgcga
      361 aggtcgcacc gatacaggtg cgcatgccgg cgccaaacgg caaccacgca aatctgtcga
      421 tacctgcacg tgccccaccg agaaaacggt ttggatcgaa atgatcgggg tcacgccaaa
      481 gccggcggtg ccggtgtagg acccagggcg cgatcaccac catcgacccg cgtttaatgg
      541 cgactccggc cagttcatct ggcccttttg ccaccctgct gatggcggcg atcggcggat
      601 aaagccgaag agattcatcg atgacagccc gggtcaaaac cagacgatcg gccatctcgg
      661 aaatcgggct gtccgtttcg cgaaccgcct ctgcggcgac acgttcgttc cagtctggtg
      721 accgggaaag caggtacagt gaccagctca aacaatttgc agtcgtttcg tgacccgccg
      781 cgatgaatgt caggatattc gaccgaacct ctgcttcggt cattcggcga ccggtgtctg
      841 gatcgagcgc attcagcaac aacgtaagca gatcctgcgg cacgtcatcg gggtcacgcg
      901 ccagtctatg acgccgggtc gcaatgatct tgtcgatagc ggcatcgaag aaccgcatcg
      961 ccgggcgcgc gcgccagcgg ccgaaccgtg ggatgaaatc cggcgctccc aacaggtcga
     1021 gcgggtcaat ccggccgatg acttcgaaat aagtcgacat cgcggaacgc aattgttccg
     1081 aatcacaacc gagaccgtcg gaaaaaatcg tgcgcaccag cacatcgagc gttagccgtg
     1141 tcatctccgc agccacgtcg acctgtgatt cctgggcgga cagcgcgtgc cagcgcgcca
     1201 caagcgccgc ggccgcctgc atgatggccg gcgtgaagca gccgaccatc cggtgcgaaa
     1261 acattggcgc caggatgcgg cgctgctcct gccactgctc accctcggca ctgagcaagc
     1321 catagcccag accggctgac agaacgcggc gctgcagcga gtccttgcga tagttcgagg
     1381 catgatccag caggacccgg cggatcgcag tgggctcgtt cagcaggact acatgaccga
     1441 gtaaccgcga ggcgatggac acaggctgtt cgaagtgctc gtcggcccag cattcgatgg
     1501 gattggattt caggacccgc aaaaggcgga aaaggcctaa tggtgccggc tggggctccg
     1561 gcgcaggcgg acggcacaac tggccggcaa ggcgcgcggg cggacgggcg agctcgatta
     1621 ctgcatccat aacacggctc ctcggccccg gtttggtggc aaacacgggg tcgccggccg
     1681 aagaacgcag cttcgcgggt tattgttccc gggctgcgaa ggcctggccc tttatgggcc
     1741 gaccacccgc cactcgtgga tcaactgatt aggggccaca tcctcgaacg tcacttcgac
     1801 ggcggcgccc accggcacct g
//
LOCUS       DATAVD010000081         2286 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_380380, whole genome shotgun sequence.
ACCESSION   DATAVD010000081 DATAVD010000000
VERSION     DATAVD010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_380380"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..288)
                     /locus_tag="VHX39_01430"
     CDS             complement(<1..288)
                     /locus_tag="VHX39_01430"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX3989810.1"
                     /translation="MDYTPAPHVTQNWLLTKPSAKGKRGMVASQARAAAEAGIAMLEA
                     GGNAVDAAVATALALPAVEPWNSGLGGIGFALVHRAGERRADVVDFGPVAPR"
     gene            complement(614..1246)
                     /locus_tag="VHX39_01435"
     CDS             complement(614..1246)
                     /locus_tag="VHX39_01435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX3989811.1"
                     /translation="MDAISADQHLIRDEATLNTLYGEISAGAIAKEIDYIHPHYRAMI
                     EASPFLVLATSGPEGLDTSPRGDPAGFVQVVDEHTLLIPDRRGNNRADSLRNIIRDPR
                     VALLFLIPGVGETLRVNGTAVISTDPALIERFPFRGTLPRTVIVVTAERVYFQCPKAL
                     VRSDLWNPDKRIDRKALPSTGTIMASISNGQLGGEAYDRAYPERLRTTIY"
     gene            1502..>2286
                     /locus_tag="VHX39_01440"
     CDS             1502..>2286
                     /locus_tag="VHX39_01440"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3989812.1"
                     /translation="MSASIEAAKALEARTMRAVSWRLMPFLLAAYIICYIDRVNIGFA
                     ALQMNKAVGIDPKTYGLGAGIFFVGYFILEVPSNLALERFGARKWIARIMITWGLASG
                     AFALIGGPTSFLVLRFLLGAAEAGFFPGVILYLTYWYPAVYRAKIVGIFMVAIPVAGM
                     IGSPVSGAVLGMDGILGLGGWQWIFILEAVPAILLGIYAFIGLTDRPEHATWLARDQQ
                     SWLIGMLTAERSRAPKVRHQSVWRVMTNKHVLIMALVYSGAAGA"
BASE COUNT          387 a          691 c          752 g          456 t
ORIGIN      
        1 gcggggcgcg accgggccaa aatccacgac atcggcacgc cgctcgccgg cacgatggac
       61 cagggcgaag ccgatcccgc caaggcccga gttccacggt tccaccgccg gcagggccag
      121 agcggtagcc actgccgcat cgaccgcgtt gccaccggcc tcgagcatgg cgatcccggc
      181 ctcagccgcc gcacgtgcct gggaggccac catgccgcgt ttgcctttgg ccgagggctt
      241 ggtcagcaac cagttctgcg tcacatgcgg cgcgggtgtg taatccatga caaggactcc
      301 tcggctcgga cgagcattgg ttacgttgtt gaacaccgcc ggccgtgccg tcaatcagcc
      361 tgtgaacaac aggcggtcga gcgtcggcgc caagatccgc cgggcgtttc gattcggatt
      421 ccggaacggg cttggaggct tgcgcagcgg cgacggacag ccgcagtgcg caaccgcctg
      481 ggtcatgcga acacgctaca cggacgtaat gtttccggtc ggcatgccgt tccagccccg
      541 cactgacaat gtgcgggatg cgcgactgtt cgaatatcga gactgccgga cgggcgagcc
      601 tcgacgaaac attttagtag atcgtcgtgc gcagccgctc cggataggcc cggtcatagg
      661 cctcaccgcc cagttgaccg ttgctgatgc tggccatgat ggtgccggtg cttggcaggg
      721 ctttacggtc gatgcgtttg tcagggttcc acaggtcgga ccgcaccaga gctttcgggc
      781 attggaaata caccctctcg gcggtgacca cgatcaccgt gcgaggcagc gtgccgcgga
      841 acgggaaccg ctcgatcagt gccgggtcag tcgagatcac cgcggtgccg ttgacccgta
      901 aggtttcgcc gacgccgggg atcaggaaca gcaaagccac cctcgggtcg cggatgatgt
      961 tccgcagact gtcggcacgg ttgttgccgc ggcggtccgg gatcagcaag gtatgctcat
     1021 cgaccacttg cacgaagccg gcgggatcgc cccgcggcga ggtgtcgagt ccctccggcc
     1081 cgctggtcgc cagcaccaga aacggtgagg cctcgatcat cgcccggtaa tgcgggtgga
     1141 tatagtcgat ttccttggcg atcgcgccgg cggagatctc gccatacagc gtgttgagcg
     1201 tggcttcgtc acggatcaga tgttggtcgg ccgagatcgc gtccattggt gcctccctcg
     1261 cagccgaggg atcatgccgg aagcgcgacg ggacatgcaa gcggcgcctg gtggcggttt
     1321 gctggcggtt cagcgcgcgg gcacggcacc tgcgcgccgt acgcaatggc cccatgcggc
     1381 gggacctgcc ctttggccgt attgagcgac cttactttga tctatgtcat ggcatgtttg
     1441 ccagcggtcg ggcgagcctg attgaagttt caaatgatca acgattgaac gggagtaaac
     1501 gatgtctgcc tcgatcgaag ctgccaaggc attggaagcg cgaaccatgc gtgccgtttc
     1561 ctggcggctg atgccatttc tgctggctgc ttatatcatt tgctatatcg accgagtgaa
     1621 catcgggttt gccgctttgc aaatgaacaa agcggtcggc attgatccga aaacctacgg
     1681 acttggcgca gggatcttct tcgtcggcta tttcatcctg gaagtgccga gcaatctggc
     1741 gctcgagcgc ttcggcgcgc gcaaatggat cgcccgcatc atgatcacct ggggcctcgc
     1801 gtcgggtgcg tttgcgctga tcggcggacc gacctcgttc ctggtgctgc ggttcctgct
     1861 cggcgcggcg gaggcagggt tcttccccgg cgtcatcctg tatctgacct attggtaccc
     1921 cgcggtgtat cgcgccaaga tcgtcggcat tttcatggtg gcaattccgg tggccggcat
     1981 gatcggttca ccggtttccg gcgcggtgct tggcatggat ggcatcctcg gactgggcgg
     2041 ctggcaatgg attttcatcc tcgaagcggt gcccgcgatt ctgctgggga tttacgcttt
     2101 cattggcctg accgaccggc cggagcacgc gacgtggctg gcgcgcgatc aacagtcctg
     2161 gttgatcggg atgctgaccg ccgagcgatc ccgcgcgccg aaagtcaggc accagtcggt
     2221 ctggcgcgtg atgaccaaca agcatgtgct gatcatggcg ctggtttatt ccggagcggc
     2281 cggtgc
//
LOCUS       DATAVD010000082         2664 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1869164, whole genome shotgun sequence.
ACCESSION   DATAVD010000082 DATAVD010000000
VERSION     DATAVD010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1869164"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            157..1428
                     /locus_tag="VHX39_01445"
     CDS             157..1428
                     /locus_tag="VHX39_01445"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX3989813.1"
                     /translation="MNAPVHYDAALEEAKLNALSLPLAEIDVSDPKLYQNDVYYPYFA
                     RLRREAPVHYRKDGMYGSFWSVTKFKDIMTVETHPEIYSSEAKLGGISITDRPMEFRR
                     SSFISMDPPRHDDQRKVVSPIVAPANLNNMSDIIRQRCCRVLDSLPRNETFDWVKLVS
                     IELTTLMLTTLFDFPEDERHKLTYWSDIATQDVNAGGEIDSEEKRLTILREALAVFTD
                     MWHERAKRPQGFDLISMLAHGEATKNLVNDPQEFLGNLTLLIVGGNDTTRNSMSGGLW
                     AMCRNPAEWAKLRANPDLVTSMVPEIIRWQSPIVHMRRTALADAELAGKQIRKGDKVC
                     MWYISGNRDEDSIDNPNDFIIDRARPRHHLSFGFGVHRCVGNRLAEMQLIILWEEIVK
                     RFPTIELMEEPERIYSNFIHGIHRMMVRIPA"
     gene            1497..1751
                     /locus_tag="VHX39_01450"
     CDS             1497..1751
                     /locus_tag="VHX39_01450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989814.1"
                     /translation="MVENTPLALLPLIAGILILVARFYVREGAISLFSSSFMLATLGV
                     AMLIGYMAMLVLQILPHYSWVVFGGIGSAMAIGGIWSFYR"
     gene            complement(1772..>2664)
                     /locus_tag="VHX39_01455"
     CDS             complement(1772..>2664)
                     /locus_tag="VHX39_01455"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEX3989815.1"
                     /translation="EGSPAMVHGGPFANIAHGCNSVMATGLALKLSDVVVTEAGFGAD
                     LGAEKFIDIKCRSAGLTPSCAVIVATVRALKMHGGIARNALGPENVEAVKKGLANLAR
                     HVENLGKFGLPVVVAVNHFTSDTEAEFAAIKDGMAALGVEAISCTHWANGSAGAEALA
                     RAVMNRIESGKAAAKPLYGLDLKLADKIRTIAKEIYRASDIAVPDAVARRLKAFEDAG
                     FGNVPVCIAKTQYSFTSDPTVMGAPTGHTIPVREVRLSAGAGFVVAICGDIMTMPGLP
                     RVPAAEAIHLRADGEIEGLF"
BASE COUNT          522 a          822 c          798 g          522 t
ORIGIN      
        1 ttgccggtcg ccggctcgca ggaagccagc atgctgagtt tcgcggcagt aactcaggcg
       61 gattcccggc tgtcgtgcca gatcccggtg accgaagcgc tcgacggtct ggtggtccgc
      121 atgcccgaag gtcagcactg aacaggagaa catccgatga atgccccggt tcattatgat
      181 gcggcactgg aagaggcgaa gctgaacgcg ctgtcgctgc cgcttgccga aatcgacgtc
      241 agcgatccga aactgtatca gaacgacgtc tattacccgt acttcgcacg gctgcggcgg
      301 gaagccccgg tgcactatcg caaggacggc atgtatgggt cgttctggtc ggtgaccaaa
      361 ttcaaggaca tcatgacggt cgagacgcac ccggagattt attcgtccga ggcgaaactt
      421 ggcggcatct cgattaccga ccggccgatg gaatttcgcc gttccagttt catttcgatg
      481 gacccgccgc ggcatgacga ccagcgtaag gtggtcagcc cgatcgtggc gccggccaat
      541 ttgaacaaca tgtccgacat cattcggcaa cggtgctgcc gcgtgctgga cagcttgccg
      601 cgcaatgaga ccttcgactg ggtgaagctg gtctccatcg agttgaccac gctgatgctg
      661 accaccttgt tcgacttccc ggaggacgag cgccacaagt tgacctattg gtccgatatc
      721 gcaacccagg acgtcaacgc cggcggcgaa atcgactccg aggaaaagcg cctgaccatc
      781 ctgcgcgagg cgctggcggt gttcactgac atgtggcacg agcgcgccaa acggccgcag
      841 ggattcgatc tgatttccat gctggcgcac ggcgaagcca cgaagaacct cgtcaacgac
      901 ccgcaggagt tccttggcaa tctgaccttg ctgatcgtcg gcggcaacga taccacgcgc
      961 aattccatga gcggcggact atgggcgatg tgcaggaacc ccgccgaatg ggccaagctg
     1021 cgcgcgaacc ccgatcttgt gaccagcatg gtgccggaga tcatccgctg gcaatcgccg
     1081 atcgtgcata tgcgccgcac cgcgctggcc gacgccgaac tcgccggcaa gcaaatccgc
     1141 aagggcgaca aggtgtgcat gtggtatatc tcgggcaacc gcgatgagga ctcgatcgac
     1201 aaccccaacg atttcatcat cgatcgggcc cgcccacggc accatctgtc gttcggcttt
     1261 ggcgtgcatc gctgcgtcgg caatcgcctg gcggaaatgc agctgatcat cctctgggaa
     1321 gaaatcgtga agcgcttccc gacgatcgaa ctgatggaag agccggagcg gatttattcc
     1381 aacttcattc acggcattca ccggatgatg gtacggatcc ccgcgtaaca gtctggtcgt
     1441 ccaaacgcgc cgccgcttcc ggccgggagc ggcggtgaat tttttcaggg atgttcatgg
     1501 tcgagaacac gccacttgcc ttgctgccat tgatcgccgg gattttgatt ctggtggcgc
     1561 gattttacgt gcgagaaggc gcgatctcgc tcttcagcag cagctttatg ctggccacgc
     1621 tgggcgtcgc gatgttgatc ggctacatgg cgatgctggt gctgcagatc ctgccgcact
     1681 attcctgggt ggtattcggt ggcatcggct cggccatggc cattggcggg atttggtcgt
     1741 tctaccggta gaacgaccaa atcccgcgtt ttcagaacag cccttcgatc tcaccgtccg
     1801 cgcgtagatg gattgcctcg gcggccggca cccgcggcag acccggcatc gtcatgatgt
     1861 cgccgcagat cgccacgaca aagccggcgc cggctgacag ccgtacctcg cggaccggaa
     1921 ttgtatggcc ggttggcgca cccatcacgg ttggatcgga ggtgaaactg tattgcgtct
     1981 tggcaatgca gaccggcaca ttgccgaagc cggcatcctc gaaggctttc aaacgccgcg
     2041 ccactgcgtc gggcaccgcg atatccgacg cacgatagat ctccttggca attgtgcgga
     2101 ttttgtcggc gagtttcagg tcgagcccgt acaacggttt cgccgccgcc ttcccgctct
     2161 cgatccggtt catcaccgcg cgagccaacg cttccgcacc ggcgctgccg ttcgcccaat
     2221 gggtgcagga gatggcttcg acgccgagtg ccgccatgcc gtccttgatc gcagcgaact
     2281 cagcctcggt atcggaggtg aaatgattga ccgccaccac caccggcagc ccgaatttgc
     2341 ccaggttctc gacgtggcgc gcgagattgg cgaggccttt cttcaccgcc tcgacattct
     2401 ccgggccaag cgcattgcgc gcgataccgc catgcatctt caatgcccgc acggtggcga
     2461 caatgacagc gcaggacggc gtcaggccgg cggaacggca tttgatatcg atgaattttt
     2521 ctgcgccgag atcggcgccg aagcccgcct cggtcaccac gacatcggac aatttcagcg
     2581 cgaggcccgt cgccatcacg gaattgcaac catgtgcaat gttggcgaat ggaccgccat
     2641 gcaccatggc cggcgagcct tcca
//
LOCUS       DATAVD010000083         3311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1869300, whole genome shotgun sequence.
ACCESSION   DATAVD010000083 DATAVD010000000
VERSION     DATAVD010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3311
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1869300"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..986)
                     /locus_tag="VHX39_01460"
     CDS             complement(<1..986)
                     /locus_tag="VHX39_01460"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3989816.1"
                     /translation="MKISDNDLVALYDEAPLTWRFWGTVVVIYAQAAFEFFDYFLVGY
                     LVAVLAGPWHLTYGQSSIMLLSAGVGAIVGSTIWGRLSDIFGRRKLLLAGTFLYPIAA
                     GLLALVPDGAWITFSLLRFLIGVGMAGAITAQIPLLVEMTPTRIRATITGAMVVPVSL
                     GVLMAALSAATLLASIGWRGIAALGAAPVVLAVIMIFIVPESVRWLLVRGRTEEARAV
                     LAKVLHRPAESIALPPSLPVAAPQAPFSDLYRDKVRFWQIATLWVTMNTVGYCVILWG
                     PTILSLRLGIPVSQAAKYFVYVSLSAIAGRILYTFLPLWIGRRYAGQLAGYAG"
     gene            complement(1055..2680)
                     /locus_tag="VHX39_01465"
     CDS             complement(1055..2680)
                     /locus_tag="VHX39_01465"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX3989817.1"
                     /translation="MIEVPVLIVGGGPVGLTASMLLSQHGIRSLLVERHPGTAIVPKA
                     RGINARTMEMYRQIGVEDAIRSAGLPPQATGLTVWTESLAGVEIERRVPGRATPKNML
                     ASPMLNCLCAQDDLEPVLRRFAEAQQRGELRFNAELSSVTQDEHGVDAVLTDRVTGDT
                     TKVRAGYVIAADGAKSAIRRMLNVRMIGRERVYDSVNIVFNADLRPWTADRPAALYFV
                     EQPDLRATFLTINARDRWGFLIHSVQQYGWQPKDFTPEHCAALVRQGVGVPDLPVTVL
                     GAVFWEASAHVAETYCHGRIFLAGDAAHEMPPTGGFGMNTGVQDVHNLAWKLAAVLHD
                     DAGPALLQTYHAERQPLGALTTQVSLDNSLSMGRTTRQSAAKLPRTEFLSEQGLIFGV
                     CYESAAVVSDGTPVPDLARSITEYVPSARPGRRAPHVWLRRDGQRVSTIDLFGRGFVL
                     LTGGSGRGWQQAASRIEPSLHLPLQVQVIGGEGTLQDEAGGAWTQAYDIEDDGAVLVR
                     PDGYVAWRVRAAPGDPEAELRDVFDRLLDRGSR"
     gene            complement(3028..>3311)
                     /locus_tag="VHX39_01470"
     CDS             complement(3028..>3311)
                     /locus_tag="VHX39_01470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989818.1"
                     /translation="IWHHPYRHASHAAPDMASHPGRAKMIDATERLDVRMSSDGKHLQ
                     LRLRDQTGQAVTFSLPACWLNTMLNAVPTSSGRNGPSAGQLEHASGRQQ"
BASE COUNT          628 a         1065 c         1055 g          563 t
ORIGIN      
        1 ccggcatagc ccgccagttg ccccgcatag cggcgcccga tccacagcgg caggaacgtg
       61 tagaggatac ggccggcgat cgcggacagg ctgacataga caaagtattt cgccgcctgg
      121 ctgaccggga tccccaaccg caacgacagg atggtcggtc cccacaggat cacgcagtag
      181 ccgaccgtgt tcatcgtcac ccaaagcgtg gcgatctgcc agaaccggac cttgtcgcga
      241 tacaggtcgc tgaacggtgc ctgtggcgcc gccacaggca ggctgggcgg cagagcgatc
      301 gattcggcgg gccggtgcag cacttttgcg agaacggcgc gcgcctcctc cgtgcgccca
      361 cgcaccagca gccaccgtac cgactccggt acgatgaaga tcatgataac ggccagaacc
      421 accggtgccg cgccgagggc ggcaatgcct cgccagccga tcgaagccag cagcgtggcc
      481 gccgacaacg cagccatcag cacccccaat gaaaccggca ccaccatcgc gccggtgatg
      541 gtcgctcgga ttcgtgtcgg tgtcatttcg accagcaatg ggatctgcgc ggtaatggca
      601 ccggccatgc cgacgccgat cagaaagcgc agaagggaga aggtgatcca tgcgccgtcc
      661 ggcaccaggg caagcaggcc ggcggcgatc ggatagagga aagtgccggc aagcaacagc
      721 ttgcggcggc caaaaatatc ggacaggcga ccccagatgg tggagccgac aatcgcgccg
      781 acgccggccg aaagcaacat gatcgaagac tggccgtagg tgagatgcca cggtccagca
      841 aggaccgcca cgaggtagcc gacaaggaag tagtcgaaga attcgaaggc ggcctgggcg
      901 tagatgacga cgactgttcc ccagaagcgc caggtcaatg gtgcctcgtc gtacagtgcg
      961 acgaggtcgt tgtcggatat tttcatttcc gtccccaatt cattatcgat ccgggttgtt
     1021 atgtctccag accgttataa agtcgcatcg gtgactacct cgaaccgcgg tcaagcaagc
     1081 ggtcgaacac atcgcgcagt tcggcttccg gatcgcccgg cgcggcgcga acgcgccagg
     1141 cgacgtatcc gtcggggcgg accaggaccg caccgtcgtc ttcaatgtcg taggcctggg
     1201 tccaggcgcc gccggcttcg tcctgcagcg tgccttcacc gccgatgacc tgcacctgca
     1261 agggcaggtg cagtgaaggc tcgatgcgtg atgcggcctg ctgccagccg cggcccgacc
     1321 cacccgtcag cagaacgaag cccctgccga acaggtcgat cgtcgagacg cgctggccgt
     1381 cacgacgcag ccagacatgc ggcgcccggc ggccgggccg cgcgctcggc acatattccg
     1441 taatcgaacg cgcgaggtcc gggaccggcg tgccatccga aacgaccgcc gcggattcgt
     1501 agcaaacgcc gaaaatcagg ccctgttcac tgaggaattc ggtgcgcggc agtttggccg
     1561 cgctctgccg cgtggtccgc cccatcgaca gggagttgtc gaggctgacc tgcgtggtga
     1621 gcgcacccag cggctggcgt tccgcgtgat aggtctgcag cagtgccggg cccgcgtcgt
     1681 cgtgcagcac cgccgcaagc ttccaggcca gattgtggac gtcctgcaca ccggtgttca
     1741 tgccaaaccc gccggtgggc ggcatttcgt gcgccgcgtc gccggccagg aaaatacggc
     1801 catggcaata ggtttcggcg acatgggcgg atgcctccca gaacaccgcg ccgagaacgg
     1861 tgaccggcaa gtcggggacg ccgacgccct gccggaccag cgccgcacaa tgctccggcg
     1921 tgaaatcctt cggttgccag ccatattgct gcacggagtg gatcaggaaa ccccaccggt
     1981 ccctggcgtt gatggtcagg aatgtggcgc gcagatccgg ctgctccacg aaatacagcg
     2041 ccgccggacg atccgcggtc cagggccgca gatcggcgtt gaacacgatg ttgacgctgt
     2101 cgtagacacg ttccctgccg atcatgcgca cgttcagcat gcggcgtatc gcgctctttg
     2161 cgccatcggc cgcgatcaca tagcccgctc ggacctttgt cgtgtcaccg gtcacacggt
     2221 cggtcagcac cgcgtcgacg ccatgctcgt cctgcgtgac cgaactcagt tcggcattga
     2281 accgcagttc gccccgttgc tgcgcttcgg caaagcgccg caatacgggt tcgaggtcgt
     2341 cctgcgcaca gaggcaattc agcatcgggc tggcgagcat gtttttcggt gtggcgcggc
     2401 ccggcacacg gcgctcgatt tccacccccg ccaggctttc cgtccacacg gtcaggcctg
     2461 tggcttgcgg cggcagaccg gccgaacgga tggcgtcctc gaccccgatc tgccggtaca
     2521 tctccatcgt tcgcgcattg atgccgcgcg ctttgggcac aatcgccgta ccggggtggc
     2581 gctcgaccag cagcgatcgg atgccgtgtt gcgacagaag catcgaggcg gtcaggccga
     2641 ccggtccgcc gccgacaatc agaactggaa cttcaatcaa gcggcgctcc tcccacggca
     2701 tcgtcgccaa ttgccagaag gctgcatccg ggttggatat cgcgcaatta cattaattcg
     2761 atgcaagcga tctcgtagcg gcatgggcat cggccctgtc cgggttggcc tcgccgatac
     2821 aacacgtctg tggtcttcgc agcgaatggg agcggtaaac gcgctatggg caacgatccc
     2881 gaagcgcagg aggatcagtt ccatccggcg ccgacattac tggatttcct tcctcagcct
     2941 gccggtttgc caggttcgac ctgccagggc ttcatggtga aggacaccgt ctggccttcg
     3001 ggcgtgcgca gggtcaggat cagatcttca ctgttgccga cccgatgcat gctccaactg
     3061 tccagcggat ggaccgtttc gaccggatga ggtaggcacg gcgttcagca tcgtgttcag
     3121 ccagcaggcc ggcagggaaa atgtcaccgc ctggccggtc tggtcacgca gccggagctg
     3181 aaggtgctta ccgtcggacg acatccggac gtccaggcgt tcggttgcgt cgatcatttt
     3241 tgcgcggcct ggatggcttg ccatatccgg agcggcgtgg ctggcatgtc gatatgggtg
     3301 atgccaaatt c
//
LOCUS       DATAVD010000084         1600 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_380655, whole genome shotgun sequence.
ACCESSION   DATAVD010000084 DATAVD010000000
VERSION     DATAVD010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_380655"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1001)
                     /locus_tag="VHX39_01475"
     CDS             complement(<1..1001)
                     /locus_tag="VHX39_01475"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3989819.1"
                     /translation="MTDALFAGLKVIDCASYVAAPAAATVLADFGADVIKIEPPGEGD
                     PWRGVYRRPGMPPSQHNHPWLMDDRNRRGLVLDLKAEAGRAVLERLISRADVFITNIP
                     LPARERLRLRYEDFAEAYPRLIYASLTAYGEVGEEAGKTGFDLTAYWARSGLMDEVRT
                     DHLHMPARSVAGMGDRPTAMALYGAIVTALYRREKTGRGGEVRASLMGSGLWANAYLI
                     QARLCGTMFPPRPPREESVSALGNLYRTSDERFFMLALASDRQWPALAQAIGMPGLVE
                     DPRFVGAEERRVNALALMGILDDVFAQRPLAEWRMVLDAAGLTFGVVGTVAEIIEDP"
     gene            complement(998..>1600)
                     /locus_tag="VHX39_01480"
     CDS             complement(998..>1600)
                     /locus_tag="VHX39_01480"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3989820.1"
                     /translation="NAGILRDRVLVNMMEPEWDAVIEVHLKGTFAPSRHAAAYWRNKS
                     KEIDGPVHARIINTSSVSGIYGNTGQTNYGAAKAGIAAFTVIAARELGRYGVTVNAIA
                     PQALTRMTEGLRERTEDQKAAMHPGRVSPAVVWIASLESSGFTGRIVEAGSGLLGIAE
                     GWHRGPTAEPEEDPTKLGPILLGLQAKARKNAGMNGLDLD"
BASE COUNT          285 a          581 c          454 g          280 t
ORIGIN      
        1 tgagggtcct cgatgatttc tgccaccgtc cccaccacgc cgaacgtcag tccggccgca
       61 tccagcacca tacgccattc cgccagcggc ctctgggcaa acacatcatc aagaatcccc
      121 atcagtgcaa gcgcgttgac ccgccgctcc tccgcaccca cgaaccgagg atcctccacc
      181 aacccgggca tcccaatcgc ctgggccagg gccggccatt gccggtcgct cgccagtgcc
      241 agcatgaaga accgctcgtc cgaggtgcga tacaaattac ccaacgcgct gactgactcc
      301 tcgcgcggcg gacgcggcgg gaacatggtg ccgcacagcc gtgcctgaat gagatacgcg
      361 ttcgcccaca gcccgctgcc catcagcgag gcccgtacct cgccgccgcg gccagtcttc
      421 tctcgtcgat acagcgcagt cacgatcgcg ccatacagcg ccattgccgt cggccgatcc
      481 cccatccccg ccaccgatcg cgccggcatg tgaagatgat ccgtccgcac ctcatccatc
      541 agccccgacc gagcccaata cgcggtcaga tcgaatccgg tcttgccggc ctcttcccca
      601 acctcgccat aagcggtcaa cgatgcgtag atcagccgag gatacgcctc ggcgaaatcc
      661 tcataccgta aacgcaacct ttcccgagcc ggcaatggga tgttggttat gaagacatcc
      721 gcccgggaaa tcagccgctc cagcaccgcg cgtcccgctt ccgctttcag gtccagcacc
      781 agcccgcgtc ggttgcggtc atccatcagc cacggatggt tgtgctgcga tggcggcatg
      841 ccgggccggc ggtagacccc gcgccacgga tcgccctcgc caggcggctc gatcttgatc
      901 acgtcggcac cgaaatccgc cagtacggtg gccgctgccg gagcggccac gtaactggcg
      961 cagtcgatga ccttcaggcc ggcaaacaga gcgtcggtca atcgaggtcc aacccattca
     1021 tgcccgcgtt cttcctggcc ttcgcctgca ggccgagcag gatcggaccc agtttggttg
     1081 ggtcttcttc gggttcggca gtggggccgc gatgccagcc ctcggcaatg cccagtaggc
     1141 cgctgccggc ttcgacaatc cggccggtga agcccgatga ctcaaggctg gcaatccaca
     1201 ccacggcggg cgaaacgcgg ccgggatgca tggcggcctt ctggtcctcg gtacgttcgc
     1261 gcaggccctc ggtcatccgg gtcagcgcct gcggggcgat ggcgttcacg gtcacgccgt
     1321 aacgccccag ttcgcgcgcc gcaatcaccg taaacgcggc gatgccggcc ttggcggcac
     1381 cgtaattggt ctggcctgtg ttgccgtaaa tccccgacac cgacgaggtg ttgataatcc
     1441 tggcgtgcac cggtccgtcg atttctttcg acttattccg ccaataggct gcggcatggc
     1501 gcgacggtgc aaacgtgcct ttcagatgca cctcgatcac cgcgtcccat tccggctcca
     1561 tcatgttcac cagcacgcgg tcgcgcagaa tgcctgcgtt
//
LOCUS       DATAVD010000085         2336 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3545258, whole genome shotgun sequence.
ACCESSION   DATAVD010000085 DATAVD010000000
VERSION     DATAVD010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2336
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3545258"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..854)
                     /locus_tag="VHX39_01485"
     CDS             complement(<1..854)
                     /locus_tag="VHX39_01485"
                     /inference="COORDINATES: protein motif:HMM:NF023222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3989821.1"
                     /translation="MRTGADYRAALRDGRRVFVMGEGQVDDVTTHPATSAVVEQYVAW
                     YDRHFDPVWAHTLLTPSGVPWSFLLPKTSADVVAIGRCIQETIFLSAGNITHTPLYGH
                     LIALGVLTAAETRNAGPHHAANAMAYRDMIADTGRFLTFCGGAAVIGQRMRPDPKDRV
                     SVKRVSENDQGMVVRGRLGMHTSPAYAEDVYVGALTGLQIDGHPAGFIVPVNAPGVTV
                     LCRKAALRDRDAFVSPLSGRYDELDGQMWLDDVFIPWEKVYAVDPEPEAIPRWLRWHH
                     LRGWLAKA"
     gene            complement(851..1894)
                     /locus_tag="VHX39_01490"
     CDS             complement(851..1894)
                     /locus_tag="VHX39_01490"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989822.1"
                     /translation="MRNYVYAGVSARTGGTISGLFRRATDEAGWVHATNGMPDDTHVH
                     AITVHPDDPATIFAATSAGLFRSRDRGEQWTRLVEPASGEQMWSVLVHPANHRTILTG
                     TAPLGLYRSDDDGETWRRMPKPAIAERMVGAFPSRIMRLAVAPSRPDTIWAGMEVNGA
                     MRSDNGGENWIDLSDELVRLSHQPDLQSALLTKDTAEGMLDVHAICVSPAAPETAFLA
                     LRMGLFRGDNGGAEWQDLRIGQHAAHLRYGRDVVVAPWDPMTLFACVADSSRGKAGRL
                     YRSQDLGRNWQQFDHAIDVQSTMMAVAVHDRGQVHCVTRRGQTFSTLDDGASWHSFPL
                     PDGAGAAVAVACG"
     gene            2025..>2336
                     /locus_tag="VHX39_01495"
     CDS             2025..>2336
                     /locus_tag="VHX39_01495"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3989823.1"
                     /translation="MLTTRFIRSVGQGALAVDFTLYLRALNWSAVAISAVLAAALLMG
                     VALTLVSGPLSDRSGRRRFLFAYEAAQCLAGLAALFSGQAAILWAASMVGGFGRGGNG
                     AA"
BASE COUNT          405 a          745 c          783 g          403 t
ORIGIN      
        1 tcggccttgg ccagccagcc gcgcaaatgg tgccagcgca gccaacgcgg gatcgcctcc
       61 ggttcggggt caacggcata gaccttttcc cagggaataa atacatcatc gagccacatc
      121 tgcccgtcca gctcatcgta acggccggac aacggcgaaa cgaacgcatc acggtcgcgt
      181 aatgcggcct ttctgcacaa gacggtgacg cctggcgcgt tgaccggaac gatgaacccc
      241 gccgggtgtc catcgatttg caagccggtc agggcgccga catacacgtc ctcggcatag
      301 gcgggactgg tgtgcatgcc cagtcggccg cgcaccacca tgccctggtc gttttcgctg
      361 acgcgtttga cggagacgcg gtctttcggg tcgggccgca tgcgttggcc gatcactgcc
      421 gcaccaccgc agaaggtcag gaaccggccg gtgtcagcga tcatgtcgcg ataggccatt
      481 gcgttcgcgg catgatgtgg gccggcgttg cgggtctccg ctgcggtcaa cacgccgagt
      541 gcgatcaggt ggccgtacag cggggtgtgc gtgatgttgc ccgcactgag aaagatcgtt
      601 tcctggatgc agcgaccgat cgcgaccaca tccgcactgg tcttcggcaa caaaaaggac
      661 cagggaaccc cggagggcgt gagcaaggtg tgagcccaga ccgggtcgaa gtgacggtcg
      721 taccaggcga cgtattgctc gaccaccgcg ctggtggcgg gatgggtggt tacgtcgtcg
      781 acctgaccct cgcccatgac gaagacgcgg cggccatcgc gcaaggcggc acggtagtcg
      841 gcgccggttc tcacccgcag gcaaccgcga cggcggcgcc ggcaccgtcc ggcagcggga
      901 acgaatgcca actcgctccg tcatcgagcg tgctgaacgt ctgaccgcgc cgggtcacgc
      961 aatgcacctg accccgatca tgaacggcga ccgccatcat ggtgctttgc acgtcgatcg
     1021 cgtggtcgaa ttgttgccag ttacgaccca gatcctgact gcgatacagc cgtccggcct
     1081 tgccgcgcga agagtcggcg acgcaggcaa acagcgtcat cggatcccac ggcgcgacga
     1141 cgacatcgcg gccataacgc aaatgcgcgg cgtgctggcc aattcgcagg tcctgccact
     1201 cggcgccacc attgtcaccg cggaacaatc ccatgcgcag cgccaggaac gcggtctccg
     1261 gggcggccgg cgagacacag attgcgtgca cgtcgagcat gccctcggcg gtgtccttgg
     1321 tcaggagggc actttgcagg tcgggctggt gtgacaaacg cacgagttca tcgctgaggt
     1381 cgatccagtt ctcgccgcca ttgtcgctgc gcatggcgcc gttcacctcc atcccagccc
     1441 agatggtatc gggacgcgac ggagcgacgg ccaaacgcat gatacgggag ggaaatgccc
     1501 caaccatgcg ctcggcaatt gccggcttcg gcatgcggcg ccaggtttcg ccgtcgtcgt
     1561 cgctgcgata caggccaagc ggcgcggtcc cggtcaggat ggtgcggtga ttggccggat
     1621 gcaccagaac ggaccacatt tgctcaccgg acgctggctc cacgaggcgg gtccattgtt
     1681 cgccgcggtc gcggctgcga aacaggccgg cactggtggc ggcgaaaatc gtggcgggat
     1741 cgtcggggtg gacggtgatc gcgtggacat gggtgtcatc cggcatgccg ttggtcgcat
     1801 gcacccaacc agcctcgtcc gttgcgcgcc ggaacaggcc gctgatcgtg ccgccggtgc
     1861 gagccgatac gcccgcgtaa acgtagttgc gcatgagaca actcctacca ctatgcctga
     1921 cgtgagcctg gcgcgccggg tcaggcaccg tcaagttgtg ccagccgacg gtatccgcca
     1981 aagacagtac tagggaggat gcaagctcgc gtaccacacg ccttttgctc acgacgcggt
     2041 tcattcgcag cgtcgggcag ggagcgctcg cggtggattt caccctgtat ctgcgcgcgt
     2101 tgaactggtc ggcagtggcg atcagcgctg tgctcgccgc agctttgttg atgggggtgg
     2161 cgctgacact ggtctccggg ccgctcagcg atcgtagcgg gcggcggcgc tttttgttcg
     2221 cctacgaggc cgcgcaatgc ctggccggac tcgctgccct gttctcgggc caggccgcga
     2281 tcctgtgggc ggcctccatg gtgggtggct tcggccgggg cggcaacggc gccgct
//
LOCUS       DATAVD010000086         5287 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_938468, whole genome shotgun sequence.
ACCESSION   DATAVD010000086 DATAVD010000000
VERSION     DATAVD010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5287
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_938468"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..592
                     /locus_tag="VHX39_01500"
     CDS             <1..592
                     /locus_tag="VHX39_01500"
                     /inference="COORDINATES: protein motif:HMM:NF016830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HEX3989824.1"
                     /translation="PEPLARTYKIGFWYDTKKFTDQLVDTNGLSLANPASNGIPAAHL
                     GDWAIYALADQLIWVDPEEGDRTINAFIRVMWTPLAEWNEIDYSMNAGLTFHEPIRHR
                     DTDTMAIGMGYTHVSHRASALDRDTQNFTGVFTPARGGETYLEITYQMQVTPWLQLQP
                     DFQYVFNPGGGVANPNDPGARVGNEAVFGVRTNILF"
     gene            608..1768
                     /locus_tag="VHX39_01505"
     CDS             608..1768
                     /locus_tag="VHX39_01505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989825.1"
                     /translation="MFRYSNNQAKWPRFVAVLLVLAAGWPALTRAQSSGFLEIIHKHR
                     TLASTIPDTGDLNPYAVVVAPVSAGKIAKDDVLITNFNNLSNLQGTGVTIIAINPATR
                     ASTKIANLPQDRKQCPGGIGLSTAMTMLKSGWIVAGSTPSTDGTTRTKGDGCLMVLDG
                     WGRVAATWTGPDINGPWGNMAVVDRGSSATLFVSMSGFDVPGPQVRDPTSGTSVVVNK
                     ATVLRLELSIPSGQPPVIMSRTVVGNGFAQRADQYDFLLGPTGLALSPDGTLYVADAV
                     SNQIDAIPDALNRTTSAGVGRVVTREGLLRHPLAMCWTPNGTLLVTNAWNGQVVELDP
                     VSGKQLFAHWLDTNQAQSPPGNGDLFGIAMKPDGSGFYYVQDDMNALVEATR"
     gene            1765..3099
                     /locus_tag="VHX39_01510"
     CDS             1765..3099
                     /locus_tag="VHX39_01510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HEX3989826.1"
                     /translation="MTASRGGGGASRRFILTGAAGLLAAVAPARAADQTTAAPNPGGA
                     EPFFGTSQAGIATPAQSHTFFAAFDLHTNDVGDVVSLLRTWTDAAARLTAGQTAQPIA
                     GGLKPADAKGVPPADRYDTPIPLDPAGMTGDTGEALGLPLARLTLTFGFGPGLFTRDG
                     ADRFGLATRRPEAFVDLPRFAGDQLDAARTGGDLSVQACADDPQVAFHAVRQLARLTG
                     GVARILWAQSGFLPAHAPDETPRNLMGFKDGTRNVSAGETTVMDSHVWVGAEGPDWMR
                     GGSYLVARRIRIALEHWDRMKLMFQEQTVGRHKLSGAPLGREQEKDPLDLDREGEDGN
                     PLIAENAHVRLAAPEENGGTQILRRPYSFNDGVNFTTERWPPWRQGLEYDAGLFFLAY
                     QRDVRTGFIRIFDRMSKFDMLNQFVTHVGGGLFACPGGVARGEFVGQRLFKV"
     gene            3103..3429
                     /locus_tag="VHX39_01515"
     CDS             3103..3429
                     /locus_tag="VHX39_01515"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HEX3989827.1"
                     /translation="MRTIIVILTALAVSRPAWCDEPETIDVTLADHQFTPAEIHVPAG
                     TQAQLRVTNRDAAAEEFDSSALKVEKVILPGQTATIHLRPLAPGRFPFMGEFHPDSAH
                     GVVIAE"
     gene            complement(3440..4057)
                     /locus_tag="VHX39_01520"
     CDS             complement(3440..4057)
                     /locus_tag="VHX39_01520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004272803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3989828.1"
                     /translation="MKILLVDDHVIVRSGLRGLLTSAMHTEILEAATGRDALLLLRRE
                     RPDLVLLDLNLPGIGGLELLRRMLLEDKTARIMVLSMHAEPLYAARAMKLGARGYLSK
                     NTAADELLAAVRRVTDGGRYIESAIAQQLALELTSPGPALPDLTERELEIMRLLADGM
                     SLTEIADALGIGYKTVANGCSLLKAKLGVSRTSELVRLAMTLGIA"
     gene            complement(4054..>5287)
                     /locus_tag="VHX39_01525"
     CDS             complement(4054..>5287)
                     /locus_tag="VHX39_01525"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3989829.1"
                     /translation="ALDVGANSVRAALEESRQTGATRISIATFNGNRHVQATLRDALD
                     RPVATSVLFTPAQPAPGWFVALIGGQPSEVRVPIQQPGDGGASIVLRTDPANEVSEVW
                     AESRDAVLVLAGFAGLTALLICIVVERTLRPLEKLADAFDQIGKGNYHGNVAERGPPE
                     LTQLANGFNVMTRRLASAATQNRRLNERLLTLQAEERADLARDLHDEIGPLLFAVDMT
                     AATIERLAADDRATTIPGHVHSIHDAVGRIQRHVRALLGRLRPMQAIGLEVAIERLTT
                     FWRSRSPDIDFVVAVSVDEDRLGDDLKETIYRIVQEGLSNAIRHGQPTLVEIEVVHDD
                     ADGIRVEVADDGIGMTTDGLVRRDPSQLGLVGMRERVMAMAGSLSLHSGRDGRGLAVT
                     AWLPSEGSLQSQDLEQPE"
BASE COUNT          954 a         1687 c         1692 g          954 t
ORIGIN      
        1 gccggagccg ctggcgcgga cttacaaaat cggtttctgg tacgacacga aaaaattcac
       61 cgaccagttg gtggatacta acggcctgtc gttggccaat cccgcgagca acggcattcc
      121 cgccgcccac ctcggcgact gggcgattta cgcgctggcc gatcagttga tctgggtcga
      181 tccggaggaa ggcgatcgca ccatcaacgc gttcatccgc gtcatgtgga cgccgttggc
      241 agagtggaac gagatcgact acagcatgaa cgcaggcctg acgtttcacg agccgatcag
      301 gcatcgcgac acggacacga tggccatcgg catgggctac acgcacgtga gccatcgcgc
      361 ctcggcgctc gatcgcgaca cgcagaattt caccggcgtc ttcacgccgg cgcgcggcgg
      421 cgagacctat ttggaaatca cctatcagat gcaggtgaca ccgtggctgc agctgcagcc
      481 tgactttcaa tatgtgttca accccggcgg cggcgtcgcc aatcccaacg atcccggtgc
      541 gcgggttggg aacgaggcgg tcttcggtgt gcgtaccaat atcctgttct gacggggagg
      601 cgaatcgatg tttcgatatt caaacaacca ggcgaagtgg cccaggttcg ttgcggtctt
      661 gttggttctg gcggcgggct ggcccgccct gacgcgggcg cagtcgtcgg gttttctcga
      721 gattatccat aagcaccgaa cgctggcttc aacgatcccc gataccggcg atctcaaccc
      781 ttatgcggtc gtggtggcac cggtttcagc cggcaagatc gccaaagacg acgtgctgat
      841 caccaacttc aacaatctgt ccaacctgca gggcaccggt gtcacgatca ttgcgatcaa
      901 tccggcgacg cgggcaagca ccaagatcgc caatttaccg caggacagaa agcaatgtcc
      961 gggcggcatc ggtctcagca cggcaatgac catgctgaaa agcggctgga tcgtggccgg
     1021 cagcacgcca agtaccgacg gcaccacgcg aaccaagggc gacggctgcc tgatggtgct
     1081 cgatggctgg ggacgcgtgg cggccacctg gaccgggccc gatatcaacg gtccctgggg
     1141 caacatggcg gtcgtcgatc gcggtagctc ggcaaccttg ttcgtcagca tgtcgggctt
     1201 tgacgttccg ggaccgcagg tgcgggatcc cacctcgggc acttcggttg tggtgaacaa
     1261 ggccacggtg ttgcggctgg agctgtcgat cccgtccggc cagcctccgg tgatcatgtc
     1321 gcgcacagtg gtggggaacg gcttcgcgca gcgcgccgat cagtatgatt tcctgctcgg
     1381 tccaaccggc ctggcgctgt cgccggatgg caccctttat gtcgccgatg cggtatcgaa
     1441 tcagatcgat gccattccgg acgcgctgaa ccgcacgacc agcgctggcg ttgggcgggt
     1501 ggtgacccgc gagggcctgt tgcggcatcc cttggcgatg tgctggacgc cgaacggcac
     1561 cttgctggtc accaacgcct ggaacggcca ggtcgtcgaa ctcgatccgg tcagcggcaa
     1621 gcaattgttc gcgcactggc tggacaccaa tcaggcgcag tcgccgccgg gcaacggcga
     1681 tctgttcggc atcgcgatga aaccggacgg cagtgggttt tactatgtcc aggatgacat
     1741 gaacgcgttg gtggaggcga cgcgatgacg gcgtcccgag gcggcggcgg cgcgtcccgc
     1801 cgattcatcc tgaccggggc ggcgggtctg ctggcggccg tcgctccggc acgagccgcg
     1861 gatcaaacca cggctgctcc caacccgggc ggtgcggagc cgtttttcgg aacgagtcag
     1921 gcgggcattg ccacgccggc gcagagccac acgttcttcg ctgcgttcga tctgcacacc
     1981 aacgatgtgg gcgacgtcgt cagtctgttg cggacctgga ccgacgccgc cgcacggctg
     2041 acggccggcc aaacggcgca gccgatcgcg ggcggcctta aaccggcgga cgcgaaaggc
     2101 gttccgcccg cggatcgtta cgacacgccg atcccgctcg atccggcggg catgaccggc
     2161 gataccggtg aggcgcttgg cctgccgctc gcccgcctga ctctgacgtt cggctttggt
     2221 ccgggcttgt tcactcgcga cggtgccgac cggtttggtc tcgccacgcg gcggccggag
     2281 gcgttcgtcg atctgcccag attcgccggc gatcaactgg atgcggcaag gactggcggc
     2341 gacctctcgg tgcaggcctg cgccgacgat cctcaggtgg cgttccacgc ggttcgccaa
     2401 ctggctcggc tgaccggtgg agttgcccgt attctgtggg cgcagtcagg tttcctgccg
     2461 gcccatgcac cggacgagac accgcgcaac ctgatgggct tcaaggacgg cacccgtaat
     2521 gtttcggcag gcgaaacgac ggtcatggac tcgcatgtct gggttggcgc cgaggggccg
     2581 gactggatgc gtggcggcag ttacctggtc gcgcggcgca ttcgcattgc cctggaacac
     2641 tgggaccgta tgaagttgat gtttcaggag cagacggtcg gacgtcacaa actctccggc
     2701 gcaccgctcg gacgcgaaca ggagaaggac ccgctggacc tggaccgcga gggtgaggac
     2761 ggcaacccgc tgatcgcgga aaatgcccat gtccgtctcg ccgcgccgga ggaaaacggc
     2821 ggcacccaga tcctccggcg gccctattcg ttcaatgacg gcgtgaactt cacgacggaa
     2881 cgctggccgc catggcgtca ggggctggag tatgacgcag gcctgttctt tctggcgtac
     2941 cagcgcgacg tgcggaccgg gttcattcgg atcttcgatc gaatgtcgaa gttcgacatg
     3001 ctgaaccagt tcgtgaccca tgtgggcggc ggcctgttcg cctgcccagg aggggtcgcg
     3061 cgaggagagt ttgtcggcca gcggctgttc aaggtgtgaa acatgcgaac gataatcgtg
     3121 atcctgaccg cattggctgt cagccggcct gcgtggtgcg acgaaccaga gacgatcgat
     3181 gttacgcttg cggatcatca gttcacgccg gccgagatcc atgttcctgc tgggacacag
     3241 gcgcagttac gggtcaccaa ccgggatgcc gcagcagaag aattcgactc gtccgcgttg
     3301 aaggtcgaaa aggtgatcct gcccggccaa accgccacca tccaccttcg gcccctggct
     3361 cctgggcgtt tcccgttcat gggcgaattt catccggaca gtgcgcatgg tgttgtgatt
     3421 gcggaatgaa gtccccgcgt caggcgatcc ccaaagtcat cgccaaccga accagctcgc
     3481 tggtccggct aacgccaagt ttcgccttta gcagactgca tccgttggcg acggtcttgt
     3541 aaccaatgcc aagcgcatcg gcgatctcgg tcagactcat gccatcggcc agcaggcgca
     3601 tgatctccag ttcccgttcc gtcaggtcgg gcagggcggg gccgggagag gtcagctcca
     3661 gcgccagctg ctgtgcgatc gcgctttcga tgtagcggcc accatccgtc acccgccgca
     3721 ccgccgccaa cagttcgtcc gccgcggtat tcttgctgag atatccacgc gccccgagtt
     3781 tcattgcgcg tgcggcatag agcggttccg catgcatgct cagcaccata atgcgagcag
     3841 tcttgtcctc cagcagcatc cggcgcagca attccagccc gccaatgccc ggcaggttca
     3901 aatcgagcag gaccaggtcg ggccgctcgc ggcgcaatag caacagcgcg tcccgtccgg
     3961 tcgcggcttc caaaatctcg gtatgcatcg ccgacgtcag cagaccgcgc aaaccggaac
     4021 gaacgatcac gtggtcgtcg accagcagga tcttcattcc ggttgttcca ggtcttgcga
     4081 ttgcaacgaa ccctcggatg gcagccaggc ggtcaccgcc agtcctcgcc catcgcggcc
     4141 agagtggagt gacagcgacc cggccatcgc cattacccgt tcccgcatgc cgaccaggcc
     4201 aagttgcgag gggtcgcgcc ggaccaaacc atctgtcgtc atgccgatcc cgtcgtcggc
     4261 cacctcgacc ctgatgccgt cggcgtcatc gtgcacgact tcaatctcca ccagcgttgg
     4321 ctggccgtgg cggatggcgt tgctcagccc ctcctgcacg atgcggtaaa tcgtttcttt
     4381 aaggtcatca cccagacgat cctcatcgac cgaaacggcg acgacaaagt cgatgtcggg
     4441 gctgcggctg cgccagaatg tggtcagccg ctcgatcgcg acctcgaggc cgatcgcctg
     4501 catcggccgc aggcgtccga gcagggctcg cacgtgacgc tggatccgcc cgaccgcatc
     4561 gtgaatggaa tggacatgcc caggaatggt ggtcgcgcgg tcatcggcgg ccagacgctc
     4621 gatggtggct gccgtcatgt cgaccgcaaa cagcaaaggt ccgatttcat cgtgcaaatc
     4681 gcgcgcgaga tcggcacgct cttccgcctg caacgtcagc agccgttcgt tcagccgccg
     4741 gttctgggtt gccgccgagg cgagccggcg cgtcatgacg ttgaacccgt tggcgagttg
     4801 ggtcagttcg ggcgggcccc gctccgctac gttgccgtga taattgccct tgccgatctg
     4861 gtcgaaggca tcggcaagct tctccagcgg ccgcaacgtg cgttcgacga cgatgcagat
     4921 cagcagcgca gtcagtcccg cgaagccggc cagcaccagc acggcgtcgc gcgattccgc
     4981 ccagacctcg ctgacttcgt tggccggatc ggtccgcagg acgatgctgg cgccgccatc
     5041 gccgggctgc tgaatgggga cacgcacttc actgggctgc ccaccgatga gagcaacgaa
     5101 ccaaccaggc gctggctgcg ccggagtgaa caagaccgac gtcgcgacgg gtcgatccaa
     5161 ggcgtcacgc aatgtcgcct gcacgtggcg attgccgttg aaggtggcga tcgaaatccg
     5221 cgttgcgccg gtctggcgtg actcctcgag tgcagcgcgc accgagttcg caccgacatc
     5281 caacgcg
//
LOCUS       DATAVD010000087         4352 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_193658, whole genome shotgun sequence.
ACCESSION   DATAVD010000087 DATAVD010000000
VERSION     DATAVD010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4352
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193658"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2414
                     /locus_tag="VHX39_01530"
     CDS             <1..2414
                     /locus_tag="VHX39_01530"
                     /EC_number="3.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HEX3989830.1"
                     /translation="SAAVTATYDGDGVPWIRAANEQDAATALGYVHARDRMFQMDLMR
                     RAASGRLAELVGPAALPLDKQMRVLGLSRLAEGDVAAQTPETRALLEAYSAGVNAWIA
                     QRGRFAALEFLYFGAPEPWRPSDSLLWGRTMSLWLSTNYRTELTRQALSEKVPTRLLE
                     QLWPPHTAPPPPQASLTGADQRFAAQSDQRPTQEGGQTSVHLSAATAAAVLAALPAFP
                     APFTLPSSASDAWAVDGRWTDTGAPMLAGDPHLSFEFPSLWYLVRIETPGRTLVGATA
                     PGAPFLVLGHNGSIAWTFTTTGADTQDVYLEPPDVTLTTHQERIKVRGQPDTNLTVRT
                     TRHGPVISDLMSGNHPIMAVAMENLMPWDTGASGLLALDHADTVEEAGKAAPLIMSPV
                     QNLMVADRTKIGLFVTGRVPIRRSGDGWAPVPGNSAMAMKTPGPTREPSAQTAGQRSP
                     TPSASTAIPSAHALPAPDAAEPGSGAPQSLTTAENGEPAQANDDPYGWIGFASGQALP
                     HIVTPASGRLVNANEPVWPPDFPVFMSRDTFSDWRARRIRTLLTGTSQPGSEPESAPK
                     HSTSDFAAMQVDTVSTYAAALLPTLRVVPGAPQVLRDWDGAMTQNAPQPLIFSAWMQA
                     FQSDVLAKAGIPYWAGSPIFEFVPFVLSPEGASWCGGDCAPLLKSTLDSTMASLASRF
                     GSDPAAWRWGAVHQAVFAHPLLRSIPVLGTLTEARIAMPGDGTTLDCGGTDEALAAVH
                     GASFRGVYDLADLDRSLFMMAPGQSGNPLSRHARDFLTRWRNGAMVMLPPQPVETSGI
                     IRLEP"
     gene            2411..2899
                     /locus_tag="VHX39_01535"
     CDS             2411..2899
                     /locus_tag="VHX39_01535"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEX3989831.1"
                     /translation="MSTTVQMVPDEAFISGVMSRRCLAWLLDAVLIGLLIGSLFLVLL
                     LFGLLTLGVGLGAMAILPAVPFLYHFLSLLRSASATPGQLVMGLTVRRDEDLGPPTGL
                     QALIFTVVFYLTLATSGLLLLIALFTVRHRTLHDLASDLVVVRRYAFDDWRRQAGAAQ
                     GF"
     gene            3228..3800
                     /locus_tag="VHX39_01540"
     CDS             3228..3800
                     /locus_tag="VHX39_01540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEX3989832.1"
                     /translation="MANDLRPALTAVLPRLRRFGLALTGSASDADDLVQNTCERALKY
                     ADQLREITRLDAWLYGIMRNLWYDEIRHRKVRRHDNIDAASDVIGEDGQATADGRITL
                     DAVRRVMSQLPTDQRAVLMLVCVDGLTYKEAAEVLGIPVGTIMSRLSRARQDLHDRLT
                     GPAKTDTVTRFPLRQVDTEPRPPRDRARPA"
     gene            3820..>4352
                     /locus_tag="VHX39_01545"
     CDS             3820..>4352
                     /locus_tag="VHX39_01545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HEX3989833.1"
                     /translation="MDALLVAYADGELDEALVTDVEAHLAANPTAQRTLAIYRETAAL
                     LRAAFPESRYAGNDAPAIIRPTATESKPRRLRLPRYTWAVAASLAMGIIGYAAGAFWP
                     GLVESRRDRMLDQVAAYHSIYSRETVHLVEVPATQEDHLKAWLGKRVNASLVIPNFNQ
                     DGLTFAGGRLVVLDGEPV"
BASE COUNT          743 a         1402 c         1387 g          820 t
ORIGIN      
        1 tgtcagccgc cgtcactgct acctacgacg gcgacggtgt cccttggatc cgtgccgcga
       61 acgagcaaga tgccgccacc gcccttggct acgtccacgc tcgcgaccgc atgttccaga
      121 tggacctgat gcgccgtgcc gcctctggca ggcttgcgga actggtgggt ccggctgcgc
      181 tgccgctcga caaacaaatg cgggtgctcg gactgagccg tctcgccgag ggcgatgttg
      241 ccgcccaaac gccggaaacc agagcgctgc tggaggccta ttcggccggc gtgaacgcct
      301 ggatcgccca acgcggccgg ttcgccgcac tggagttcct gtatttcggg gcaccggaac
      361 cctggcgtcc atccgacagc ctgttgtggg gccgcaccat gagcctttgg ctgtcgacga
      421 attaccgcac cgaactcacg cgccaggcgc ttagcgaaaa ggttccaacc cgtctgttgg
      481 agcagttatg gccgccccac acagcccctc cgccgccgca ggccagcctg acgggcgcgg
      541 atcaacgctt tgccgcgcaa tcggaccaac ggcctaccca ggagggcggg cagacgagtg
      601 tgcatctctc cgccgccacg gcagccgctg tccttgccgc tcttcccgca ttccctgcgc
      661 cattcaccct cccctcctcc gcctccgacg catgggccgt ggacgggcgc tggaccgaca
      721 caggcgcccc gatgctggcc ggcgatccgc atctgagctt cgagtttccc agcctgtggt
      781 acctcgtacg catcgaaacc ccggggcgta cgctggttgg cgcgacggcg cctggcgcac
      841 cgtttttggt cctcgggcac aacggctcga tcgcctggac cttcaccacc accggggctg
      901 acacccagga cgtctatctc gagccgcccg acgtcacgct caccacgcat caggaacgga
      961 tcaaggtccg cggccagccc gacaccaatc tgacggtgcg gaccaccagg cacgggccgg
     1021 tcatcagcga cctgatgtcc gggaatcatc cgatcatggc ggtcgccatg gaaaatctta
     1081 tgccgtggga caccggtgcc agcgggttgc tggcgctgga tcatgctgac acggtcgagg
     1141 aagccggcaa ggctgcgccg ctgatcatgt ctccggtgca aaatctgatg gtcgcggacc
     1201 gcacgaaaat cggcctcttc gtcaccggcc gggtgcccat ccgtcgctcc ggcgatggat
     1261 gggcaccggt tccaggcaac tcagccatgg ccatgaaaac gcccgggcca acacgcgagc
     1321 catcggccca aacggctggc cagcgctccc cgacgccatc ggcgtcgacg gcaatcccgt
     1381 ccgcccatgc attgcctgca cctgacgccg cggagccggg ctccggagca cctcaatccc
     1441 tgacgacagc cgagaacggc gagccggcgc aggcgaatga tgacccgtat ggctggatcg
     1501 gatttgcctc aggccaggcg ttgcctcaca tcgtcactcc ggcgagcggc cgcctggtca
     1561 atgccaacga accggtttgg ccgcccgatt tcccggtgtt catgagtcgt gatacattca
     1621 gcgactggcg tgcgcgacgc atccggacac tgctcacagg caccagccaa ccaggttcgg
     1681 aaccggagag tgcgcccaaa cactccacca gcgacttcgc ggcaatgcag gtcgataccg
     1741 tcagcaccta tgctgctgca ttgctgccca cgttgcgcgt cgtgcccggc gcgccacagg
     1801 tgttgcgcga ctgggatggc gcaatgaccc agaacgcgcc gcagccgttg atcttctccg
     1861 cctggatgca agcattccag agcgacgttc tggccaaggc cgggattccg tactgggctg
     1921 gctcgccgat attcgagttc gttccgttcg tgctgtcgcc cgagggagcg tcatggtgtg
     1981 gtggcgactg cgcaccgtta ttgaagtcga cgctggacag cacgatggct tcgctcgcat
     2041 cccggttcgg ctccgatccg gccgcatggc ggtggggcgc agtgcaccag gccgtattcg
     2101 cccacccgtt gctgcgctcg atccctgtgc tggggacgtt gaccgaagcg cgcatcgcga
     2161 tgccgggcga cggcacaacg cttgactgcg gcggcacgga cgaagcgctg gcagccgtgc
     2221 acggcgcaag tttccgcggg gtctacgacc tggcagacct cgaccggagt ctgttcatga
     2281 tggcgccggg ccagtccggc aacccgctca gccgccacgc gcgggatttt ttgacgcgat
     2341 ggcgcaatgg cgcgatggtg atgttgccgc cgcaacccgt cgaaacctcc ggcatcataa
     2401 ggttggagcc atgagtacta ccgttcagat ggtacccgat gaagcgttca tttccggcgt
     2461 gatgagccgg cgctgcctcg cctggctgct ggatgcggtg ctgatcggcc tgctgattgg
     2521 ctcgctgttt ctcgtgctgc tgctgtttgg cttgctgacg cttggcgtgg gattgggtgc
     2581 catggcgatc ctgccggcgg tgccgttcct gtatcatttc ctgagtttgc tacggtctgc
     2641 cagcgccacg ccgggtcaac tggtgatggg gctgacggtg cgccgggacg aggatctggg
     2701 cccgcccacc gggcttcagg cgctgatctt caccgtggtg ttctatctca cgctggcgac
     2761 atcggggctg ctgctgctga ttgcgctgtt caccgtgcgg caccggacct tgcacgatct
     2821 ggcgagcgat ctggtggtcg tgcgacggta cgccttcgat gattggcgtc gtcaggctgg
     2881 ggccgcccag ggattttgag cgacgtaccg ggccgtcggt ggccaggcgc gacgtttaat
     2941 accgtgtcac gctgcaacga ttgttgctac gagtgtttga gatttgcaca gatcatccgt
     3001 cccttgtata ggctcgtcga ttgagttgga cgttacggca gtgcgcatcg gtgatttccg
     3061 cgcaggccgt ggcacacgac gggtaaaact cttgccgtaa ctgccgatcg atcgcttttc
     3121 gcgtttccag aaatgacaaa acaccggctg gcacgcgtga aaatccggag cctcgggaat
     3181 gcaacgcctg ctgatacgtc ataacgtgca cctgggagtt gtgcgacgtg gctaacgacc
     3241 tgcggccagc actgaccgcc gtgctgccgc ggcttcgccg gttcgggctg gcgttgactg
     3301 gctctgcctc cgatgctgac gacctggtgc agaacacgtg tgagcgtgcg ctgaagtacg
     3361 ccgaccagtt gcgggaaatc acccgattgg atgcctggct ttatgggatt atgcggaacc
     3421 tctggtatga cgagatacga catcgcaaag tgcgtcgcca tgacaatatc gatgcggcct
     3481 ccgatgtgat cggcgaggat ggccaggcca cggccgacgg ccggatcacg ctcgatgcgg
     3541 tgcggcgcgt gatgagccag ttaccgacgg atcagcgcgc cgtgctgatg ttggtctgcg
     3601 tggatggcct gacctataag gaagcggcgg aagtacttgg tataccggtc ggaacgatca
     3661 tgagcagact gtcacgggca cgtcaggatt tgcacgatcg gctgaccgga ccggcaaaga
     3721 ccgataccgt tacgcggttc ccgctccgcc aggtcgacac tgaaccacgg ccgccccgcg
     3781 accgggcgag gcccgcctga catggcaagc aaccacgaca tggacgccct gcttgttgca
     3841 tatgccgacg gcgaactgga tgaagctttg gtgaccgacg tggaagcgca cctcgctgcg
     3901 aacccaacgg cgcaacgaac cctggcgatc tatcgggaga ccgctgctct gttacgtgcc
     3961 gcctttccgg agagtcgtta cgcgggtaac gatgcgccgg cgattatcag gccgaccgca
     4021 acagagtcga aaccacgcag gctgcgtttg ccacgctaca cgtgggcggt cgctgcctct
     4081 ctggcgatgg gcatcatcgg ttatgcagcg ggcgcattct ggcccggtct ggtcgagtcc
     4141 cggcgtgacc gcatgctcga ccaggttgcc gcgtatcact caatttattc gcgagagacc
     4201 gtgcatctcg tcgaggtccc cgccacccag gaagatcacc tcaaagcctg gctgggcaag
     4261 cgggtcaacg cgagtttggt cattccgaat tttaatcagg atggcctgac cttcgcgggc
     4321 gggcgactgg tcgtgctgga tggcgagccg gt
//
LOCUS       DATAVD010000088         3746 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3172044, whole genome shotgun sequence.
ACCESSION   DATAVD010000088 DATAVD010000000
VERSION     DATAVD010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3746
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3172044"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VHX39_01550"
     CDS             complement(<1..317)
                     /locus_tag="VHX39_01550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989834.1"
                     /translation="MLRRAFLTGAALAATLASPVVVKAGDHGTADEAKALCEKAVADL
                     KENGPDKAFAVFNDPHGSFIDRDLYVFVRSLDGNTVAHGANIHMIGHTNLSLRDADGK
                     LYN"
     gene            complement(565..1740)
                     /locus_tag="VHX39_01555"
     CDS             complement(565..1740)
                     /locus_tag="VHX39_01555"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3989835.1"
                     /translation="MSSSGPLARFKVIDLTRVRAGPTCVRQLADWGADVIKIEAPEGD
                     AGLGGERHGPDFQNLHRNKRSLTLNLKAPEGLEILRRLVEKSDVVVENYRPDVKFRLG
                     VDYESLKKINKRLVYASISGFGQDGPYRDRPGFDQIAQGMGGLMSITGLPGQGPVRVG
                     IPVADLTAGIFAAMGILIALLEREQSGEGQWVTSSLLGAQIAMLDFQAARWTIAHEVP
                     GQAGNNHPTSIPTGVFATSDGHINIAAAGDDIYQRCCRALGVPHLADDPRFATGRSRS
                     ENRDILNEMIEAITRDKTSAEWIDKLNAEGVPCGPIYKMNEVFADPQVKHLGIARKVA
                     HKVLGDVEVIGQAIELSRTPWSVRSATPEPGEHTDAVLSELGYGTADIAALHAKKVV"
     gene            complement(1863..3155)
                     /locus_tag="VHX39_01560"
     CDS             complement(1863..3155)
                     /locus_tag="VHX39_01560"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3989836.1"
                     /translation="MVAAVKRSGRKRWSVLCLISLMYLVTYLDRANISTVAPVIAKEF
                     DIGKIEMGFIFSAFVWSYALFQIPGGWLGDRFGPRRMLTGIVGYWSVMTALTAAASGV
                     ASFAAVRFLFGIGEAGAFPVATRAMQLWFPPRERGLAQGVSHSASRLGAAVSPPIVVA
                     IVATLGWRWVFYICAAVGLMWCVLWFLTYRDLPEQQASVSRDELAYIRGVDEQGNIMQ
                     AKVERMAVLPWGILCRSSSMWALMCAYFTSGYCGFIFLSWMPSYLVEYRHFTLLKVGI
                     FASLPFWAGVVGDTTGGLAVDWLMARTGSVKLAHRAVAIVGLLGCVACIVPAALVDSA
                     YTAVGCLTASFFFLECAIAPYWAVAMHIGGKYSGTVSAAMNMAGNIGGALSPIVFGIL
                     VHYGSWQAPFIIAAVLLVFGAGIWAFWLNPEVSAIEVG"
     gene            complement(3340..>3746)
                     /locus_tag="VHX39_01565"
     CDS             complement(3340..>3746)
                     /locus_tag="VHX39_01565"
                     /inference="COORDINATES: protein motif:HMM:NF024503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEX3989837.1"
                     /translation="GAPPAKPGEAALGKPLLSLTLPHRGPADPMPYSVETDADVGLDW
                     RNALSQWVEEHSYYPNQAAEMHQQGSVRVLVTTLPNGRVTSVELEHGSGSPWLDLALE
                     GMFRGAKLPPLPKSAGDQPVPFHFTMHYILIR"
BASE COUNT          770 a         1229 c         1091 g          656 t
ORIGIN      
        1 tggttgtaca gcttgccgtc ggcatcgcgc agactgaggt tcgtgtggcc gatcatgtga
       61 atgttggcgc catgcgcgac ggtgttgccg tccagcgagc ggacgaacac ataaaggtcg
      121 cggtcgatga acgaaccgtg cggatcgttg aatacggcga atgccttatc cgggccgttt
      181 tctttcaggt cggcgacggc tttttcacac agggccttgg cttcatcggc agtcccgtgg
      241 tcacccgcct tgaccacgac gggggaggcc agggtggcgg ccagagcggc tcccgtcaga
      301 aacgcgcgac gcaacatgga actctcctgc accagtgaac ctgcatgcag tgtggcgcgg
      361 agagatcaat aagggattaa tgctggctca aacatcgacc gtgcgggatg cggcgttctg
      421 ccagagtttg agcattgcac ccaacccgcg agaaaatccc ctccattttt cgcaaccaac
      481 tctgtccgcc ggatccaacg ttcggcttcg ggacgccgtt tgatcgtcag gccctcgttc
      541 ggccgagcca ggatgacggg acttctacac aaccttcttc gcgtgcagcg ccgcgatgtc
      601 tgcggtgcca tagcccagtt cggacaacac cgcgtcggta tgctcaccag gttcgggtgt
      661 ggcggaacgg accgaccacg gcgtgcggct cagttcgatc gcctgaccga tcacctcaac
      721 atcgcccagt actttgtgcg cgaccttccg agcaataccc aaatgtttca cctgcggatc
      781 agcaaacacc tcgttcattt tgtaaatcgg tccgcacggc acgccttctg cattcagctt
      841 gtcgatccat tcggccgacg tcttgtcacg tgtgatcgcc tcgatcatct cattcagaat
      901 atcacgattt tccgaccgcg accggccggt ggcgaacctc ggatcatcag ccaggtgcgg
      961 cacgccgagc gcccggcagc aacgctggta aatgtcgtcg cccgccgcgg caatgttgat
     1021 gtggccgtca gacgtggcaa acaccccggt cgggatgctg gtcggatgat tgttgccggc
     1081 ctggcccggc acctcatgcg caatcgtcca gcgcgccgcc tgaaagtcca gcattgcgat
     1141 ctgtgcgcca agcagagaac tcgtgaccca ctgcccctcc ccggactgct cacgttccag
     1201 cagtgcgatc aggatgccca tggcagcgaa aataccggcg gtcagatcag cgaccggaat
     1261 accgacccgt accggcccct gtcccggcag tcccgttatc gacatcagcc cccccattcc
     1321 ctgggcgatc tgatcgaatc cgggacgatc ccggtatggc ccatcctggc caaaccctga
     1381 gatagacgca taaaccaatc gtttgttgat tttcttcaac gactcataat cgacgccgag
     1441 ccggaactta acgtcagggc gatagttttc caccacaacg tccgacttct cgacaagccg
     1501 gcggagaatt tccagcccct ccggcgcttt caaattcaac gtcaggctgc gtttgttgcg
     1561 gtgcaggttc tgaaaatccg gtccatggcg ttcgccgccg agaccggcat cgccttccgg
     1621 tgcttcgatc ttgatcacgt cggctcccca gtcggcgagc tggcgcacac aggtcggacc
     1681 cgcgcgcacc cgcgtcagat cgatcacttt gaagcgggca agcgggcctg aactgctcat
     1741 gaagcctcca tcgcagacaa tttggcgacc cggcggcgga cgtccgggtc atcggaaaac
     1801 cgcaccgaga aatacgcgtc aaacaggtcg ctggccagcc acataacggc aatccgaacg
     1861 gcctatccga cttcgattgc cgacacctcg gggttgagcc aaaaagccca gatccccgca
     1921 ccgaaaacca gcaacaccgc agcgatgatg aatggcgcct gccacgaccc gtaatgcaca
     1981 agaatcccga aaacgatcgg cgacaacgcg ccgccgatgt tccccgccat gttcatcgcg
     2041 gccgacacgg tgccggaata tttcccgccg atatgcattg ccacagccca gtacggcgcg
     2101 atcgcgcact cgaggaagaa gaacgaagcc gtcaggcagc cgaccgcggt ataggcgcta
     2161 tcgaccagtg ccgcgggcac gatgcacgcc acgcagccca gaagacccac gatcgccacc
     2221 gcgcgatggg ccagtttgac gctgccggtc cgcgccatca gccagtcgac ggcgaggccg
     2281 cccgtcgtat cgccaacgac cccggcccag aacggcaacg aggcgaaaat gccgaccttg
     2341 agcaatgtga agtggcgata ctccaccagg taggacggca tccagctcag aaaaatgaag
     2401 ccgcagtaac cgctggtgaa ataggcgcac atcagcgccc acatgctgga ggaccggcac
     2461 aggatgcccc acggcagcac cgccatacgc tcgaccttgg cctgcatgat gttgccctgt
     2521 tcgtcgacgc cccggatata tgccagttcg tcgcggctga ccgaggcctg ctgctcaggc
     2581 aggtcgcggt aggtcagaaa ccacagcaca caccacatca gaccgaccgc cgcgcaaatg
     2641 tagaacaccc agcgccagcc aagggtcgcg acgatcgcca ccacgatggg cggcgacacg
     2701 gcggcgccaa gcctgcttgc gctgtgggat acgccttgcg ccaggccgcg ctctcgcggg
     2761 ggaaaccaaa gctgcatggc gcgggtcgcc accgggaatg cgccggcctc gccgatgccg
     2821 aacagaaatc tgacggccgc gaacgaagcc acgccgctgg cagcggcggt caaggcggtc
     2881 atgacggacc agtaaccgac gatgccggtc aacatgcgcc gcggcccaaa ccggtcgccc
     2941 aaccagccgc ccggaatttg gaacagcgcg tagctccaaa caaacgcgct gaagatgaag
     3001 cccatctcga tcttgccgat gtcgaattct ttggcgatga ccggtgccac ggtcgagatg
     3061 ttcgctcgat cgagataggt caccaggtac atcaggctga tcaggcacag taccgaccaa
     3121 cgcttccttc cggagcgctt cactgcagca accaaggcgt ggtttcctca ctattggccg
     3181 gcactctctg tgggccggct ggtgaatgtc cggggacgat ggatcggccc ggtcacgcgg
     3241 gcaatcacgg gcgagcattt tgcgctcgga ccggcccggc ggcgagtcca ctgcccgtct
     3301 cagttcaagc ggacgtttgc ggcagtggtc atgccgcgat cagcgtatca ggatgtagtg
     3361 catggtgaaa tgaaacggca ccggctgatc gccggcactc ttcggtaacg gcggcaattt
     3421 cgcgccccgg aacattcctt ccagtgccag atcgagccag ggcgaaccgg atccatgctc
     3481 cagctccacc gacgtcaccc gcccattcgg caaggtcgtg accaggaccc gcaccgagcc
     3541 ttgctgatgc atctcggcgg cctggtttgg atagtaggag tgttcctcca cccattggct
     3601 gagcgcgttg cgccagtcga ggccgacatc ggcatcggtc tccaccgaat agggcattgg
     3661 gtcagccggc ccgcgatgcg gcagggtcag cgacaacaac ggtttcccca gtgccgcttc
     3721 gcctggtttc gcgggcggag caccca
//
LOCUS       DATAVD010000089         1756 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2613915, whole genome shotgun sequence.
ACCESSION   DATAVD010000089 DATAVD010000000
VERSION     DATAVD010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2613915"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..382)
                     /locus_tag="VHX39_01570"
     CDS             complement(<1..382)
                     /locus_tag="VHX39_01570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HEX3989838.1"
                     /translation="MLVGTPAGEGFRVLDSFSRIVRLGEGLHSTGRLGEPAMERAIIA
                     LRACATRLQRRHVKQVRAIATEACRRATNGADFLCRVKRETGFDFGIITGREEAELAL
                     ESCAPLLRCEGRRALLFDIGGGSTE"
     gene            complement(585..1487)
                     /locus_tag="VHX39_01575"
     CDS             complement(585..1487)
                     /locus_tag="VHX39_01575"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEX3989839.1"
                     /translation="MRVAFEHQGSIQAVLKQLCQTAMLEGVAIIDRSQPGEPVTYSAG
                     VAGIDTIETGRSLLAANPGEPSHGRGADARAVLACPWCIPPSRLGGLILWRAPGAPGW
                     GDADHPLAASTAMLLRQILSAGFGQVGIDTLTGIPNRRWFIDEADRRIDRLERDGAVG
                     TLSVVDIDNLKRLNNQLGRPTADRVLVRLASQLRAVVRPADLVARIGEDEFALWQDGM
                     DHMTAAERAESLCARPLFDAITNGQSVSLSIGIASRVPPSGEDIRTLLRRAHMAAREV
                     KVQGGGTWRVSHSLSVGPRSDPPE"
BASE COUNT          310 a          578 c          574 g          294 t
ORIGIN      
        1 gttcggtgga tccgccgccg atatcgaaga gcaacgcccg ccgaccctca cagcgcagca
       61 gcggcgcaca gctttccagc gcgagttcgg cttcctcgcg gcccgtgatg ataccgaaat
      121 caaacccggt ttcccgtttc acccggcaca ggaaatccgc accgttggtg gctctgcgac
      181 aggcttcggt cgcgatcgcc cgcacctgtt tgacgtgccg ccgctggaga cgggtggcac
      241 aggcgcgcag tgcgatgatg gcgcgctcca tggccggttc gccgaggcgg ccggtgctgt
      301 gcagcccctc ccccagacgg acgatgcgcg agaaactgtc gaggacgcga aacccctcac
      361 cggccggggt gcccaccagc atgcggcagt tattggtgcc gagatcgagt gcggcgaagg
      421 caggtccgtg aacgcgacgt acaaaatccg gccgcgtgtc attcaactgc gcggcggctt
      481 caagctcaac ggatgcttgc accgtcacca tggccggagt gtccgacgca taacggtcac
      541 aaggcaagca ccgaatgcaa atttctgact tacttgctct tttttcactc cggcgggtcg
      601 gaacgcggtc ctacggagag ggagtgcgac acccgccagg tcccgccgcc ctgcaccttg
      661 acttcccgag cggccatgtg agcgcggcgg aggagggtgc ggatatcttc gccgctgggg
      721 ggcacgcggc tggcaatgcc gatcgacagc gacacggact ggccattggt tatggcgtcg
      781 aacagcggcc tggcgcacaa tgactcagcg cgttcggcgg cggtcatgtg atccatgccg
      841 tcctgccaga gtgcgaactc atcctcgccg atccgcgcca cgaggtcggc gggccgcacc
      901 acagcccgca actggctagc caatcggacc aggacgcgat cggccgtcgg ccggccgagt
      961 tgattattca gccgtttcaa attgtcgatg tcgacgaccg acagcgtgcc gacggcgcca
     1021 tcacgctcca gccggtcgat gcggcggtcg gcttcgtcga tgaaccagcg ccggttgggg
     1081 atgccggtca gcgtgtcgat gccgacctgg ccgaacccgg cgctgaggat ttggcgcagc
     1141 agcatggccg tcgatgcggc caggggatga tcggcgtccc cccaccccgg cgcgccgggc
     1201 gcacgccaca ggatcagccc gcccagccgc gatggcggaa tacaccacgg gcaggcgagc
     1261 accgcgcgcg catcggcacc ccgtccatgc gagggttcgc cggggttggc ggccagcagg
     1321 gaccgtccgg tttcgatcgt gtcgatgccc gcgacgcccg cgctgtaggt cacaggctca
     1381 cccggctggc tgcgatcgat gatcgcaacc ccctccagca tcgctgtctg gcaaagctgt
     1441 ttcaggacgg cttgaatgga gccctgatgt tcgaacgcga cacgcacagc cacttgtctc
     1501 cagacctcgt tcggcacgag agaataacca cattacgcat cagatggtga catttcctcc
     1561 acatcctctg ccaggatagc atggttggca attatttcag gagcaactga gcatgcgtgc
     1621 cgtctggtac gaccggcagg gaccggttcg ggaggtcatg gtcacgggcg aattgccgac
     1681 gccggagccg gcgctgggtc aggtccgcgt gcggctggag gcgtcgggcg tcaacccgtc
     1741 ggatacttat cgccgc
//
LOCUS       DATAVD010000090         7316 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3545893, whole genome shotgun sequence.
ACCESSION   DATAVD010000090 DATAVD010000000
VERSION     DATAVD010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7316
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3545893"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..754
                     /locus_tag="VHX39_01580"
     CDS             <1..754
                     /locus_tag="VHX39_01580"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX3989840.1"
                     /translation="MKQDASQQQLEVAQAKSGQLIASIAADEARIDTAKINLAWCYIT
                     APFDGRVGLREIDPGNFIRAAEVSAVMPLSQLHPIAVTFPVPQDKLPDVQRALAAGKP
                     PVLAYTSDEKTELDSGTLLTIDNAIDSTTGTIKLKATFPNANSQLWPGQFVNAKLLVG
                     VDKGVLTVPTAAVRHGQNELFVYIVKPDQTAVRQVVEVQRDDGVTAIISKGLEDGQIA
                     VTDGQSRLQNGSHVSLINNAPKEAANEPRQGG"
     gene            779..3931
                     /locus_tag="VHX39_01585"
     CDS             779..3931
                     /locus_tag="VHX39_01585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3989841.1"
                     /translation="MSISTPFIQRPVATSLFIAALVLVGLAAYPLLPVAPLPRVDFPT
                     IAVNVKYPGASPETMATSVAQPLERQFAVIPGIAQMTSVSVAGSAQITLQFDLDRNID
                     GAAGDVLAQINAATGALPKNLPSPPTYWKVNPSDAPIMILGLQSDSAPLIDIDEYADT
                     VLSQQISQLAGVGQVFIAGERKRAVRVQVDPAKLAAMGLTMEDVRQVLVTATADSPKG
                     MIDGKDRSYSVLANDQLTRAAEFQKVIIGWKDGAPIRVSDVGTAIDAAENATIDGYQS
                     VIPGRPPVPGVVLLIFKQPGANVIDTVERIKALLPRLEASIPPSIKTQIIVDRTQTIR
                     ASLHEVQFTLMLSVALVVMVIFLFLRNFWATLIPSITVPVALICTFAVMYLMDYSLDN
                     LSLMALTIAVGFVVDDAIVMLENIFRHIEDGMRPMEAALKGASEIGFTIVSISCSLIA
                     VFIPLLLMGGIVGRLFREFAMTVTIAVIISAIVSLTLTPMMCSRFLHHRGGSHGLGYR
                     IIEGFFTNLIGGYRRTLDIALRFRFVTLMVFFGTMGLTAYLYMTTPTGFFPAQDNGIM
                     IATTQMAQDISYKHMGEIQRKLTDVIAADPDTAAYASFWGTAQAGYTLNNGRAFIALK
                     PWDQRVGGNIYQYIARNRAKLAKISGGTMFMSVIQDVRTGGKISKTDFQYSLQDADLN
                     ELLLWAPKIQEKLEKLPMLRDVTSDQQTGGTTATITVDRDQAARFGIQPQVIDDTLYD
                     AFGQRQVTQYFTQVNSYHIVLEAMPGQQSDLETINKLYVKSSTGQAVPLSSFVKWSTV
                     PVQPLSISHQSMFPAITLSFNLAQGAALGDAVNAINAAMADIHLPISVNASFQGTAQA
                     FQESLKTQPYLIAAALITVYIILGILYESYILPITILSTLPSAGVGALLMLNIAHLDL
                     SVIAMIGIILLIGIVKKNGIMMVDFAITAERMRGLASEDAIRQACLMRFRPILMTTMA
                     ALLSGLPLMLSNGAGSELRKPLGYAMVGGLALSQVLTLYTTPVVYIYLSKLQQLLSGR
                     RATMPHLATAIGGVEATEAD"
     gene            complement(4028..4777)
                     /locus_tag="VHX39_01590"
     CDS             complement(4028..4777)
                     /locus_tag="VHX39_01590"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX3989842.1"
                     /translation="MLPFLLLSAAGLLAGAMNAIAGGGSFVTFPVMVFAGLPPVIANA
                     SSTVALFPGTIASTFAYRHDLHGIGGFRLTVLAPLSFAAGVVGAMLLLATPAHLFDAV
                     IPFLLLLAALTFAFGARAGIALRQVIRIGPRALPFVQFVIATYGGYFGGAVGLMMMAS
                     WCLLTESDDLKAMTPARVLLTSAANGGAVLCFIIAGAVRWPETLAMLAASVIGGYLGA
                     RLTRLLPPAIVRRFVIALTALVTLVFFLRMI"
     gene            complement(5048..6388)
                     /gene="purB"
                     /locus_tag="VHX39_01595"
     CDS             complement(5048..6388)
                     /gene="purB"
                     /locus_tag="VHX39_01595"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014104727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEX3989843.1"
                     /translation="MVPRYSRPQMAGIWSPENRYRIWFEIEALAAEAMARAGAIPESA
                     ARTIREKGGPKLAAIGPADIERIDAIERETRHDVIAFLTWLAEAVGPDSRFIHLGMTS
                     SDVLDTCLSVQLTQAADLLLADLDAVLAALKRRAFEHKHTLTIGRSHGIHAEPTTFGL
                     KLAGHYAEFDRGRTRLLAAREEIAVAAISGPVGTFAHLDLSVEEYVASRLGLRPEPIS
                     TQIIPRDRHAAFFATLAVIASGIERVATEVRHLQRSEVREAEEFFHPGQKGSSSMPHK
                     RNPVLSENLTGLARIVRSAVVPALENVTLWHERDISHSSVERAIGPDTTVTLDFALMR
                     LAGMMDRLLVYPDRMRANLDSLGGVVYSGEVLLALARSGISREDAYDITQRCAMATWT
                     KLGTPEGREFRANLEADPEVIGRVSAAELDAAFDPAMHMRAVDRIFARVFREAD"
     gene            6476..7072
                     /locus_tag="VHX39_01600"
     CDS             6476..7072
                     /locus_tag="VHX39_01600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003620166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEX3989844.1"
                     /translation="MDFAGWPADLTILAQVVMIDVALAGDNAVVVGMAVAGLPMHRRR
                     PAVLLGIGGATLLRILLGAVALRLLDIIGLTLAGGLLLLWVCWRMYRELRAAQHTHGD
                     VHPEKTLRQAMTQIIVADLSMSVDNVLAVAGAAHGHPWVLVVGLLFSVVLMGAAAAAI
                     ARLLDRFRWIGWIGLLIVLHVAIDMIWTGGWNVFGTLS"
     gene            complement(7067..>7316)
                     /locus_tag="VHX39_01605"
     CDS             complement(7067..>7316)
                     /locus_tag="VHX39_01605"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEX3989845.1"
                     /translation="SSLAYDRNVKRSLYARHGIPEFWIVNLVAGEVEVCRGPEGEQYT
                     SILRIGREGMLELQLLPGAMPGACAAQSHQLPSQRSRL"
BASE COUNT         1433 a         2235 c         2263 g         1385 t
ORIGIN      
        1 catgaagcag gacgcgtcgc aacagcagct tgaggttgcg caggccaaat ccggccagct
       61 catcgcctcg attgccgccg atgaggcacg gatcgatacc gcgaagatca acctggcctg
      121 gtgttacatc accgcgccgt tcgacggacg ggttgggttg cgggaaatcg atccgggcaa
      181 tttcatccgt gcggccgaag tcagcgccgt gatgccgttg tcgcaattgc atccgatcgc
      241 ggtgacgttc cccgtgccgc aagacaagtt gccggacgtc caacgcgcat tggcggccgg
      301 caagccgcct gtgctggcat acaccagcga cgaaaagacc gaacttgaca gcggcacctt
      361 gctgaccatc gacaacgcga ttgactcgac gaccgggacc atcaagctca aagccacatt
      421 cccgaacgcc aattctcagc tctggcccgg ccagttcgtc aacgcgaagc tgctggtggg
      481 cgtcgataag ggcgtgctga ctgtgccgac ggccgcggtg cggcacggcc agaatgagct
      541 gttcgtctat atcgtcaaac ccgaccagac cgcggtgcgg caggtcgtgg aggtccagcg
      601 cgacgatggc gtcaccgcca tcatttccaa agggttggag gacggccaga tcgcggttac
      661 cgacggccag tcccggttgc agaacgggag ccacgtgtca ctgatcaaca atgccccaaa
      721 agaggccgcc aatgaaccac ggcaaggcgg ctgaacccgg ttcacgacga ggccatacat
      781 gagtatttcg acccctttta tccaacggcc cgtcgcgact tctctgttca tcgcagctct
      841 ggtgctggtc ggcctcgctg cctatccgct gttgccggtc gcgcctttgc cgcgcgtcga
      901 cttcccgacc atcgccgtga acgtgaagta tccgggcgcc agtccagaga ccatggcgac
      961 ctctgtggcg cagccgctgg agcggcaatt cgcggtcatt ccgggcatcg cgcagatgac
     1021 ctcggtcagc gtggcggggt cggcgcagat cacgctccag tttgatctcg atcgcaacat
     1081 cgacggcgcc gcgggcgacg ttctggcaca aatcaatgcg gcaaccgggg cgttaccgaa
     1141 gaatctgcct tcaccgccga cgtactggaa agtcaatccg tccgacgcgc cgatcatgat
     1201 cctggggttg cagtcggaca gcgcgccatt gatcgacatc gatgagtacg ccgacacggt
     1261 cctgtcgcag caaatttcgc agcttgccgg tgtgggccag gtgttcatcg ccggcgaacg
     1321 caagcgagcg gtccgcgtgc aggtcgatcc ggcgaagctc gccgccatgg gcctgacaat
     1381 ggaggatgta cgccaggtcc tggtcactgc gactgccgac tcacccaagg gcatgatcga
     1441 tggcaaggat cgctcctatt ccgttctggc caatgatcaa ctgacgcgag cggccgagtt
     1501 tcagaaggtc atcatcggct ggaaggatgg tgcgccgatc cgcgtcagtg atgtcggcac
     1561 tgcgatcgat gcggccgaga atgcgacgat cgatggctat cagagcgtga tcccgggccg
     1621 gcctccggtc cccggagtcg tgttgctgat cttcaagcag ccaggcgcca acgtcatcga
     1681 tacggtggaa cggatcaaag cgttgttgcc gcggctcgag gcatcgatcc cgccgtcgat
     1741 taagacccag atcattgtcg atcggaccca gaccatccgc gcgtcgctgc atgaggtgca
     1801 gttcaccttg atgctgtcgg tcgccctggt ggtgatggtg atctttctgt tcctgcggaa
     1861 cttctgggcc acgcttatcc cgtccatcac cgtgccggtc gcgttgatct gcaccttcgc
     1921 ggtgatgtat ttgatggact acagccttga taacctgtcg ctgatggcgc tgaccatcgc
     1981 ggtggggttc gtggtcgacg acgcgatcgt catgctggag aacatcttcc gccatatcga
     2041 agatggcatg cggcccatgg aggcggcgct aaaaggcgcc tccgaaatcg gcttcaccat
     2101 cgtgtccatc agttgctcgc tgatcgcggt gttcattccg ctgctgctga tgggcgggat
     2161 tgttgggcgc ctgttccgcg aattcgcaat gaccgtgacg atcgcggtta ttatctcggc
     2221 gatcgtctcg ctgacgctga caccgatgat gtgctcgcgc tttttacacc accgcggcgg
     2281 cagtcacggc ctgggttacc gcattattga agggttcttt accaatctga tcggcggcta
     2341 ccggaggacg ctggatatcg cgttgcgctt ccgtttcgtc accctgatgg tcttcttcgg
     2401 cacgatgggg ctgaccgctt acctttacat gacgacgccc accggatttt tcccggccca
     2461 ggacaatggg atcatgatcg cgaccaccca aatggcgcag gacatttcgt acaagcatat
     2521 gggtgagatc cagcggaagc tgaccgacgt gatcgcggcc gatcctgaca ccgccgccta
     2581 tgcgtcgttc tggggcaccg cacaggccgg ctatacgctg aacaacggcc gcgccttcat
     2641 cgctctgaag ccatgggacc aaagggtcgg cgggaatatc tatcaataca ttgcccgcaa
     2701 tcgcgcgaag ctggcgaaaa tctccggcgg cacgatgttc atgtcggtca ttcaggacgt
     2761 gcgcaccggc ggcaagatct cgaagaccga tttccagtat tcgctgcagg acgccgatct
     2821 caatgaactc ctgctctggg cgcccaagat tcaggagaaa ctcgagaaat tgccgatgct
     2881 gcgcgacgtc acgtccgatc agcagaccgg cggcaccacg gcgaccatta ccgttgaccg
     2941 cgaccaggcg gcgcgcttcg gaatccagcc gcaggtcatc gacgatacgc tttacgacgc
     3001 gttcgggcaa cgccaggtca cgcagtattt cacccaggtg aactcctatc acatcgtgct
     3061 tgaggcgatg cctgggcaac agtccgacct cgaaacgatc aacaaactgt acgttaagtc
     3121 cagcaccggc caggcagtgc cgctcagttc attcgtgaaa tggtcaaccg tgccggtgca
     3181 gcctttgtcg atcagccacc aaagcatgtt cccggccatt acgcttagct tcaatctggc
     3241 ccagggtgcg gcgttgggtg atgcggtgaa cgcgatcaac gcggcgatgg cggacatcca
     3301 tctgccgatc tcggtcaacg cgtccttcca gggcaccgcg caggcgttcc aggagtcatt
     3361 gaaaacccag ccctacctga tcgcggccgc gctcatcacc gtctacatca tcctgggcat
     3421 cctgtacgag agctatatcc tgccgatcac catcctttcg acgcttcctt cggccggtgt
     3481 cggggcgctg ttgatgctga atatcgcgca cctcgatctc tccgttatcg cgatgatcgg
     3541 cattatcctg ctgatcggca tcgtaaagaa gaacggcatc atgatggtcg acttcgccat
     3601 cacggcagaa cgaatgcgcg ggctggcgtc ggaggacgcg attcgccagg cgtgcctgat
     3661 gcggttccgg ccaattctga tgaccacgat ggcggcattg ctgtccggcc tgccgctgat
     3721 gctcagtaat ggcgcgggtt cagaattgcg gaaaccactc ggttacgcga tggtcggcgg
     3781 actggccctg agccaggtgc tgacactgta taccacgccg gtcgtgtata tttacttgtc
     3841 gaaactgcaa cagctgctgt cgggccgccg ggcgacgatg ccgcatctgg ccacagccat
     3901 cggtggcgtt gaagcgactg aggctgactg acgtgggatc ggcgacgtcg caaccggcag
     3961 ccacagtctg ccggccgacg ctgcggtttc aaccttggcg caagtcaagg cgcgacgctg
     4021 ggcaagttca gatcatgcgt agaaagaaca ccagcgtgac caacgccgtc agcgcaataa
     4081 cgaaccggcg cacgatcgcg ggcgggagca atcgggtcag acgagcgccc aggtaaccac
     4141 cgatcacact ggccgcgagc attgccaagg tctcgggcca gcgaactgcg cctgcaatga
     4201 taaagcacag gaccgctccg ccattggcgg cactggtcag tagcacgcgc gcgggcgtca
     4261 ttgccttgag atcgtcactc tcggtcagca ggcaccagga cgccatcatc atcaggccaa
     4321 ccgcgccgcc gaaatatccg ccataggtcg cgatcacgaa ctgaacgaat ggtagcgcgc
     4381 gaggaccgat ccgaatgacc tggcgaagcg cgatgcccgc gcgggcgcca aacgcgaatg
     4441 tcagtgccgc gagcagcagc agaaacggga taaccgcgtc aaacagatgc gcgggagtgg
     4501 ccagcagcaa catcgctccc accacgccgg ccgcgaagct gagcggagca agtacggtga
     4561 gccgaaaacc tccgatccca tgcagatcgt gccgataggc aaaggtgctg gcgatggtgc
     4621 caggaaacag cgccacggtt gaggatgcgt tggcaataac cggcggcagg ccggcgaaca
     4681 ccataacggg gaacgtcacg aacgatccgc cgccggcaat ggcattcatc gcaccagcca
     4741 ggagaccggc tgcggaaaga aggaggaaag gaagcatcta cgcgaattta agcaggtcaa
     4801 ctgaattgtg acagcgaagg ttggaattgt tcgttcggtg acgaactatt tcttgctccg
     4861 gacgccgccg gacaaggcgt cctgaacgcg acgccagaca ctcacatgac attccactga
     4921 tcgaacacaa aattcaggtc tgtcgcgatg gcgccggcaa cccccgcccg gagggaaaga
     4981 agcatttgca ggagtgcatt acgggattcg ctgtcagttg gtttgggtgg gccttactcg
     5041 ttgtccctca atcagcttcc cgaaacaccc gggcgaaaat ccgatccacc gcgcgcatgt
     5101 gcatcgccgg atcaaacgcc gcatcgagtt ccgcggcaga aacccggccg atcacttcgg
     5161 gatcagcctc cagattcgcg cggaactccc gtccctccgg tgtccctagc tttgtccagg
     5221 tcgccatcgc gcagcgttgc gtgatgtcgt acgcgtcttc gcgcgagatc cccgaccgag
     5281 ccagcgccag cagcacctcg ccggagtaaa ccacgccacc cagactatcg agattggcgc
     5341 gcatccgatc cggatagacc agcagccggt ccatcatccc cgccagccgc atcagagcga
     5401 aatccagcgt caccgtcgtg tcaggcccaa tcgcccgttc cacgctggag tggctgatgt
     5461 cacgctcgtg ccaaagggtc acattctcca gcgccggcac gacggcagag cgaacgatgc
     5521 gggccaggcc ggtcagattt tcgctcaaca ccgggttgcg cttgtgcggc attgatgacg
     5581 agcccttttg gccaggatgg aagaactcct cggcctcacg gacctcgctg cgttgcaggt
     5641 ggcggacttc agtggccacc cgctcaatgc cgctggcgat caccgccaga gtggcaaaga
     5701 aagcggcgtg acggtcgcgc ggaatgatct gggtcgagat cggctccggc cgcaggccaa
     5761 gccgggatgc gacgtattcc tcgaccgaca gatcaaggtg agcgaacgtg cccaccggac
     5821 cgctgatcgc ggcaacggcg atttcctcac gcgccgccaa caggcgggtc cggccgcggt
     5881 cgaactccgc gtaatgcccc gcgagtttca gtccgaacgt agtgggttcc gcatggatac
     5941 catggctgcg accgatcgtc agggtgtgtt tgtgctcgaa tgcccgccgc ttcagggcgg
     6001 cgaggacggc gtccagatcc gcgagcaaca gatcggcggc ctgggtcagt tgcaccgaca
     6061 ggcaggtatc cagcacgtcg gaactcgtca ttccgaggtg gatgaagcgg ctgtcggggc
     6121 ccaccgcctc ggcgagccag gtcaggaagg cgatgacgtc atggcgggtc tcgcgctcga
     6181 tcgcgtcgat ccgttcgata tcggcgggtc caatggcggc gagcttagga ccgccctttt
     6241 cgcggatcgt acgggcggcg gattcaggaa tagcaccggc gcgcgccatg gcctcggcgg
     6301 ccagggcttc gatctcgaac caaatgcgat agcggttttc gggggaccat attccggcca
     6361 tttgcgggcg gctgtaacgc ggaaccatgc ggtcctcatc ggaaaacggg gtgtgatttc
     6421 gtcgtgtctg ggttaacacg gctccgtcat cagcgtcgag gatcgtggac cgttcatgga
     6481 ctttgccggt tggcctgcag acctgacgat cctggcgcag gtggtgatga tagacgtggc
     6541 cctggccggc gacaacgcag tggtcgtggg gatggcggtg gccggcctgc ccatgcaccg
     6601 gcgccgtccg gcggtgctgc tggggatcgg cggcgcaacc ttgttgcgca tcctgcttgg
     6661 agcagtggcg ctccgcctat tggacatcat tggcctgacc ctcgccggcg gtctgctgct
     6721 gctatgggtt tgctggcgca tgtatcgcga actgcgggcc gcgcaacaca cccatggtga
     6781 cgtgcacccg gagaagacac tgcgacaggc gatgacccaa atcatcgtcg ctgatctgtc
     6841 catgagcgtt gacaatgtgc tcgctgtcgc tggggcagcg cacgggcatc cgtgggtact
     6901 ggtcgtcgga ttgctgttct ccgtcgtctt aatgggggca gcggcagcgg cgattgctcg
     6961 gctgttggat cggtttcgct ggatcggatg gatcggactg ttgatcgtgc tgcatgtggc
     7021 tatcgacatg atctggaccg gtgggtggaa cgtgttcggg actctgtcat aggcggctgc
     7081 gctgtgaggg gagttggtgg gattgagcgg cgcacgcacc gggcattgcc ccgggcagca
     7141 gctgaagctc cagcattcct tcccgaccga tgcgcaaaat cgaggtgtat tgttcgcctt
     7201 ccggccctcg gcagacctcc acctcgccag caacgaggtt cacgatccaa aactccggaa
     7261 taccgtgccg cgcatagagt gatcgtttca cgttgcgatc gtacgccaga ctggaa
//
LOCUS       DATAVD010000091         2086 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1310808, whole genome shotgun sequence.
ACCESSION   DATAVD010000091 DATAVD010000000
VERSION     DATAVD010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1310808"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(302..1684)
                     /locus_tag="VHX39_01610"
     CDS             complement(302..1684)
                     /locus_tag="VHX39_01610"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX3989846.1"
                     /translation="MTPTGWLIRLIRTSGFRLILLYTGLFTVSVLILFVLMLWWGGAY
                     VLQQIDQAVHDELGDVQAAAARPESAGLRAVVAEFAADAASGDRYLLENAAGKVLAGN
                     MPSLPPRSGMITWYPDPGLLAFWPLQHGVRGVGVRLSDGSFLFVGRDTFALNEMREMV
                     TRSFLWVLAATLTLAVAGGVVMSLGSLRRVEAIGRTSQEIIAGDLSRRIPVRGTGDEF
                     DRLALSLNAMLDRIQVLMEGLNQVSSDIAHDLRTPLTRLRQRLELAGRRPEGVESLRL
                     TLASATLDVDAILETFSALLRIAQIEAQSRVAEFTRVDLSDLLHDLVEFYEPTADEQG
                     HVIAAEIAPDLLVTGDQELLSQMFANLIDNAIRHSEPGGAVTVAAYPGRQGIVAEVLD
                     AGPGIPGEMREKVFQRFFRLERSRTTPGTGLGLSLVAAVAKIHHSSVQFVDRGPRFSV
                     RLLIPSILGE"
     gene            complement(1692..>2086)
                     /locus_tag="VHX39_01615"
     CDS             complement(1692..>2086)
                     /locus_tag="VHX39_01615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3989847.1"
                     /translation="VKPFAFAELTARVEALGRRPRQLGPDTVLRVADLEMDMLARTVT
                     RRGRRLTLQRQEFRLLEYLLRHAGQVVTRTMLLENVWGYHFDPHTNVIDSHISRLRGK
                     IGADLVHTVRGAGYCVRPPDVPAASDVI"
BASE COUNT          432 a          690 c          618 g          346 t
ORIGIN      
        1 aatacgacat atcgcacggg gcagtcgcca gcacactgtc cggactcagc aggcagatta
       61 cagcggcagc gaaggcatcc gggcagcgtg tgaccctgcc gcgggcgccg gccggttcca
      121 gcgccgcccc ggcaacacca gtcgcaagca cggcgtcgga ggctggcaag atcaacgtga
      181 ccgcttgaag gtccagacgt cgtcatagtc gtgtccggca cggggagacg ggcgtcatgg
      241 atccggcctc gctgcccgtt ccagcagctt tgagtgatct gtccgtgctg gaccgatagg
      301 tctattcgcc gagtatgctt ggaatcagca acctgacgct gaaccgcgga ccacgatcca
      361 caaattgtac gcttgagtga tgtatcttcg caactgccgc aacgaggctc aaaccgaggc
      421 cggttcctgg cgtcgtgcgg cttcgctcca gccgaaagaa acgctggaag accttttccc
      481 gcatctcgcc tggtatccca ggccctgcgt ccaggacttc cgcaacaatg ccttgtcgac
      541 cagggtacgc ggcaaccgtc accgcgccac ccggctcact atgacggatc gcattatcga
      601 tcaggttagc aaacatctgg ctcagcagtt cctgatcgcc ggtcacaagc aagtccggcg
      661 cgatctccgc agcaatgaca tgcccctgct cgtctgccgt tggttcatag aattcgacga
      721 gatcatgcaa gagatcactc agatcgacac gggtaaattc ggcgacgcgg gattgagcct
      781 caatttgtgc gatacgcagc agcgctgaaa acgtttcaag aatggcatcg acatcgagcg
      841 tcgccgacgc cagggtcagg cgcagcgatt caaccccttc gggccgccga cccgccagtt
      901 ccaaccgttg ccgcagccgt gtcagcggcg tgcgaagatc gtgcgcgata tcgctggaaa
      961 cctggttcag tccttccatc agcacctgga tacggtcaag catcgcattg agactcaacg
     1021 cgagtcggtc gaattcgtcg cctgtgccgc gcaccgggat acgccggctc aggtcgccgg
     1081 cgatgatttc ctggctggtg cggccaattg cctcaacccg ccgcaacgac cccaggctca
     1141 tcacgacacc gcccgccacg gccagggtca gtgtcgccgc cagcacccac aggaatgacc
     1201 gggtcaccat ctcccgcatc tcgttcagcg cgaaggtgtc gcgaccgaca aacaggaagc
     1261 tgccatccga tagacgcacc ccgacgccac gtacgccgtg ctgcagcggc cagaacgcca
     1321 gcagacccgg atcaggatac caggtgatca tgcccgaccg cggcggcagt gatggcatgt
     1381 taccggccaa caccttgccg gcggcattct cgagcagata gcggtcgccg gacgcggcat
     1441 ccgcggcgaa ctccgctacg acggcccgca gccccgcgga ttctggtctc gcggcggcgg
     1501 cctgcacatc gcccagctcg tcatgcaccg cctggtcgat ctgctggagg acataggcgc
     1561 cgccccacca taacatcagg acgaacagga tcagaaccga gacagtaaac agcccggtat
     1621 agagtaagat gaggcggaaa ccggaagttc gaatgaggcg aataagccag ccagtcgggg
     1681 tcatgcgcgg cttagatgac atcggatgcc gcgggcacat ccggcggccg cacgcaatag
     1741 ccggcaccac gcacggtgtg gacgagatcc gctcctatct tgccgcgcaa ccggctgatg
     1801 tggctgtcga tcacgtttgt atgcggatcg aagtggtacc cccacacgtt ttccagcaac
     1861 atggtgcggg taaccacctg accggcatgc cgcagcaggt attccagcag ccggaattcc
     1921 tggcgctgca gtgtcaggcg ccgaccgcgg cgcgtcaccg tgcgcgcgag catgtccatt
     1981 tccaggtcgg ccacgcgcag cacggtatcg ggccccagtt gccggggacg gcgccccaga
     2041 gcctccaccc gagccgtcag ttcagcaaat gcaaagggct tcacca
//
LOCUS       DATAVD010000092         4225 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2800077, whole genome shotgun sequence.
ACCESSION   DATAVD010000092 DATAVD010000000
VERSION     DATAVD010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4225
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2800077"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..207)
                     /locus_tag="VHX39_01620"
     CDS             complement(<1..207)
                     /locus_tag="VHX39_01620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989848.1"
                     /translation="MFARRVAARRLTFSVATAALLAGCAATPLGPTVQVMPGPGKTLD
                     AFQADNGACKSFAADAVKGQADAAN"
     gene            complement(531..1847)
                     /locus_tag="VHX39_01625"
     CDS             complement(531..1847)
                     /locus_tag="VHX39_01625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989849.1"
                     /translation="MRSTLAAWLVSLSVLAAPAWAMQFQPTQVSSTELVVDGRGPIVP
                     GDNDRLTRALAGLPRTGFTLLALALDSPGGNVAEAKEMVGVIQARQLPVIIPSNAQCA
                     SACFLLFAASPRRFAATDALIGVHSANQDGAETDTSLAVTTLMARDAADLGVPASIVG
                     TMVETTPGRVAWLDPHDLSLMRVTIYNGNALTALRQPDPSHPRHDLPATTAASSSPLP
                     AATAGSGTGAAAGRDDRRQWEAWLGGLHGAYRDGAMFALTRMYTVQPGLCYGPGNVNR
                     GDFTLGCEVALQRLASTAEKTRVNAEYAAGWNTPITAFETHEAVEQVYQGVYFCARQI
                     VHLTLKMYRPTNPPRVRGVFAFGPGDNSREIPQGSFIVEGIFDPNAGRMTLTPLKWVL
                     QPPGYSWFGLAGGSDDGGKTFSGRLTNSDGCTRFTLAKVPDPTAFR"
     gene            2010..2363
                     /locus_tag="VHX39_01630"
     CDS             2010..2363
                     /locus_tag="VHX39_01630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family reductase"
                     /protein_id="HEX3989850.1"
                     /translation="MAKRVTIYGIKACDTMKKARTWLDQHGVGYGFHDYKVQGIGRDA
                     LTGWARSVGWETLLNRSGTTFRKLAEADKAALDEAKAIGLMLAQPSMIKRPVLDVDGA
                     LVVGFRPEVYAAAFG"
     gene            2417..3445
                     /locus_tag="VHX39_01635"
     CDS             2417..3445
                     /locus_tag="VHX39_01635"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3989851.1"
                     /translation="MLFPITEHVLRTDRHTTFYLGCGAADATPLIFVHGWPELSISWR
                     HQLPVFAALGFRCIAPDMRGYGRSGVYTRHEDYALQHSVGDMLALLDSLGHAKAVWVG
                     HDWGSPVVWSLASHHPDRCFGVVNLCIPYLPAGFAPANMIGLVDRSVYPAVEFPAGQW
                     EYQLFYEENFDTARRGFEASMADTVSAIFRKGNPAGKGQPSRTALVRRDGGWFGGAGR
                     APAIPRDPAVLSEADHSRYVAALERNGFFGPDSWYMNHDRNIAFAGEAVDGGRLAMPV
                     LFLHGAYDYTCETIDSGLADPMRASCGDLTEVVVESGHWMAQEAPVAVNAALVRFLAT
                     KLPAVWAG"
     gene            3765..3899
                     /locus_tag="VHX39_01640"
     CDS             3765..3899
                     /locus_tag="VHX39_01640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989852.1"
                     /translation="MPHQPKPAIRIGVGGWTYEPWRGVFYPEGLPQKRELDYASRKLT
                     "
     gene            3900..>4225
                     /locus_tag="VHX39_01645"
     CDS             3900..>4225
                     /locus_tag="VHX39_01645"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEX3989853.1"
                     /translation="MEVNGTYYGSQKPETFAKWHDETPDDFVFSLKAPRFATNRRVLA
                     EAGPSIERFFSGGVLELRDKLGPINWQFMATKKFDPEDFHAFLRLLPNSVEGRAIRHV
                     VEVRHD"
BASE COUNT          725 a         1246 c         1471 g          783 t
ORIGIN      
        1 gttcgccgca tcggcctggc ccttcaccgc gtccgccgcg aacgacttgc aggcaccgtt
       61 gtcggcctga aacgcatcca atgtcttgcc gggaccgggc atcacctgca cggtcgggcc
      121 cagcggggtc gctgcgcagc ccgccagaag tgcggccgtg gcgacagaaa aggtgagccg
      181 tcttgcggca acacgacgag cgaacattac ataagtctcc ccaaggaaca tgccgttaac
      241 aaacggtaac cgattaagcg gcaccacaca agtggtgcgg gcccgtttga cgccggaacc
      301 catgcgatac ttcagcggtg gatggacatt cgaacccgac tgacatggcc cctattgcca
      361 ccgaaatggg ttgcttcgcg ttcaactacc gcaaccgtca tacttcatcg ccgtccggat
      421 ctatgtcatt caaacacgtc gtttcaccca gacacctggt tccacccaga cttttaattc
      481 cacccaggca ttttgtccga cccaaacact tcgaccggca aagcaagtat tcatctgaac
      541 gcggtaggat caggcacctt cgcaagggtg aaacgggtgc atccgtcact attggtcaag
      601 cgtccactga acgtcttgcc gccatcgtcc gacccaccgg caagaccaaa ccacgaatag
      661 cccggtggtt gcaataccca ttttaatggc gtgagagtca tccttccggc attcggatcg
      721 aatatcccct ccacaatgaa cgatccctgc ggtatctccc ggctgttgtc gccgggaccg
      781 aaggcaaaaa ccccgcgaac gcgtggcggg ttcgtcggcc ggtacatctt caacgtcaga
      841 tgcacgattt gccgggcaca gaaatacacg ccttgatata cttgctcgac cgcttcgtgc
      901 gtttcgaaag cggtgatcgg ggtgttccat cccgccgcgt attcggcgtt cacccgggtc
      961 ttctccgccg tggatgccag ccgttgcagg gcgacctcgc agccgagggt gaaatcgccc
     1021 cggttgacgt tgccggggcc atagcaaaga cccggctgga ctgtgtacat ccgggtcagg
     1081 gcgaacatcg cgccgtcgcg gtaggcaccg tgcaggccgc ccagccatgc ctcccactga
     1141 cggcggtcgt cccggccggc cgcggcgccg gtgcccgaac cggccgtggc ggcgggcagc
     1201 ggcgacgatg acgcggcggt cgtggccggc aggtcgtggc gcgggtggga cggatccggc
     1261 tggcgcagcg cggtcagcgc gttgccgttg taaatcgtca cccgcatcag cgacaggtcg
     1321 tgcgggtcga gccatgcgac ccggcccggc gtcgtttcca ccatcgtgcc gacgatcgac
     1381 gccggcacgc ccagatccgc cgcgtcgcgc gccatcagcg tggtgaccgc cagcgaggtg
     1441 tcggtttcgg cgccgtcctg gttggcgctg tggacgccga tcagcgcatc ggtcgcggcg
     1501 aagcggcggg gcgaggcggc gaacaacaga aaacacgccg acgcgcactg ggcgttgctg
     1561 ggaatgatca ccggcaactg gcgggcttga atgacgccga ccatttcctt ggcttccgcc
     1621 acgttgccgc cggggctgtc cagcgccagc gccagcaggg taaatccggt cctcggcagg
     1681 ccagccagcg cccgggtcag ccgatcgttg tcacccggca cgatcgggcc gcggccgtcg
     1741 acgaccaact cggtcgaaga cacctgggtg ggctggaact gcatcgccca cgccggcgca
     1801 gccaggacac tcagtgaaac caaccaggcc gcgagggtcg accgcattca gggactccac
     1861 catgcatccg cgttgcattc gccgaacgat acaggctccg gcgccgggtt gccagggatg
     1921 gcagaatgga aatacagcgt ttggcggggc ggtatttcgg ccgggcaggg cgtccggtgc
     1981 gggatcgcgg ccatgtgggg ggcagggcga tggcgaagcg ggtcacgatc tacggcatca
     2041 aggcttgcga cacgatgaag aaggcgcgga cgtggctcga tcagcacggg gtcgggtatg
     2101 ggttccacga ctacaaggtc caggggatcg gacgcgacgc cctgaccggg tgggcgcgat
     2161 cggtggggtg ggagacactg ctgaaccgaa gcggcacgac attccggaag ctggcggagg
     2221 cggacaaggc ggcgctggac gaggcgaagg cgatcgggct gatgctggcc cagccatcga
     2281 tgatcaaacg ccccgtgctg gacgtggatg gcgcgctggt ggtcggcttc aggccggagg
     2341 tctatgcggc ggcattcggc tgacgatcgt cagcgtcccc gtccaatagc gtgtaacgtc
     2401 gacaggagga ctggccatgc tgtttccgat caccgaacat gtgttgcgga ccgatcgcca
     2461 tacgacgttc tacctcggtt gcggggcggc ggacgcgacg ccgctgatct tcgtgcatgg
     2521 ctggccggaa ctgtcgatca gttggcgtca ccagcttccg gtgtttgccg cgctgggttt
     2581 ccgctgcatc gcgcccgaca tgcgggggta tggacgctcc ggcgtttaca cgcggcatga
     2641 ggattatgcg ctgcagcaca gtgtcggcga catgctggcg ctgctggact cgcttggcca
     2701 tgccaaggcg gtgtgggtgg gtcatgactg gggtagtccg gtggtgtgga gcctggcgag
     2761 ccatcatccg gatcgttgct tcggcgtggt gaatttgtgc atcccgtatc tgccggccgg
     2821 gttcgcgccg gccaacatga tcgggctggt ggatcggtcg gtgtatccgg cagtcgaatt
     2881 tcccgccggg cagtgggaat accagttgtt ctacgaggag aacttcgaca cggctcgcag
     2941 ggggttcgag gccagcatgg ccgatacggt cagtgcgata tttcgcaagg gcaatccggc
     3001 ggggaagggg cagccgtccc gcaccgccct ggtgcggcgc gatggcggct ggttcggtgg
     3061 ggcagggcgg gcgccggcta taccgcggga tcccgcggtg ctgagcgagg ccgaccacag
     3121 ccgttatgtc gcggcactgg agcgtaacgg gttcttcggt cctgattcgt ggtatatgaa
     3181 tcacgatcgt aatatcgcct ttgccggcga ggcggtcgat ggtggccggc tggcgatgcc
     3241 ggtgctgttc ctgcatgggg cttatgatta cacttgcgag accattgact cgggtcttgc
     3301 cgacccgatg cgggcgagct gcggcgatct gaccgaggtg gtcgttgaat cggggcactg
     3361 gatggcgcag gaggccccgg tggcggtcaa tgccgcgctg gttcggtttc tggcgacgaa
     3421 gttgccggcg gtctgggctg ggtgattggg ggctgagggc gtttgtggtg cgccgcggcc
     3481 gtgctgggcc ggttcgtccg cttcgacgca gagcgcgcag agcgtggcgc agagttcgct
     3541 gagatgtttc gtgccgacgg cggtcggcat ctgcgcctgt tgcctttcca attgaaggca
     3601 tggaccgcgg ccttcgccca ccatgacggt gagaggcggg tttcagtgtg tcactcgttc
     3661 ggcggactga tatttgatgc ggttgcgctg cgcgttgtct tggtggccgt gcgtgggtgg
     3721 ggggactgtg atagagcggg cgggttgtca gggagacgca ggccatgccg catcaaccga
     3781 aacccgccat ccggatcggt gtcgggggat ggacctacga gccgtggcgc ggggtgttct
     3841 atcctgaggg gctgccgcaa aagcgggaac tggactacgc cagtcgcaag ctgacctaga
     3901 tcgaggtcaa cggcacctat tacgggtcgc agaagccgga gacgtttgcc aagtggcatg
     3961 atgagacgcc ggacgatttc gtgttttcgc tgaaggcgcc gcggtttgcg accaaccggc
     4021 gggtgcttgc cgaggcgggg ccgtcgatcg agcggttttt ctccggcggg gtgctggaac
     4081 tgcgcgataa actggggccg atcaactggc agttcatggc gacgaagaaa ttcgatccgg
     4141 aggattttca tgcttttctc cggctgctac cgaacagcgt ggagggcagg gcgatccggc
     4201 atgtggtcga ggtgcggcat gacag
//
LOCUS       DATAVD010000093         4266 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2614094, whole genome shotgun sequence.
ACCESSION   DATAVD010000093 DATAVD010000000
VERSION     DATAVD010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4266
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2614094"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..96
                     /locus_tag="VHX39_01650"
     CDS             <1..96
                     /locus_tag="VHX39_01650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_273701376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UGSC family (seleno)protein"
                     /protein_id="HEX3989854.1"
                     /translation="PHPVQDRTDEELQKLADDHLEEILALLVKQV"
     gene            complement(296..2194)
                     /gene="selB"
                     /locus_tag="VHX39_01655"
     CDS             complement(296..2194)
                     /gene="selB"
                     /locus_tag="VHX39_01655"
                     /inference="COORDINATES: protein motif:HMM:TIGR00475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HEX3989855.1"
                     /translation="MIIALAGHVDHGKTALIRALTGIDADRLPEEKKRGMTIDLGFAH
                     LRLPSGAMVGFVDVPGHERFLANMLAVVLSIDTVLLVVAADDGPMPQTREHLSILGLT
                     GISDVTAVLSKIDRVDATQREAARQAVRNVLDDAGYATTPILEASGVTLDGIPAVLAS
                     IEAKAAAHEARDASGGFRLAIDRSFSPAGAGLVVTGTVTSGIVTIGDRLLLSPSRLAA
                     RVRGIQVHNEVAVSARAGDRCALAISGPRVERARLKRGDWLIDPSLHAPTQRIDALVR
                     AVGDRGARHASRMHIHFGTSSVTGRVLMQKASDLAPGETGFVSIALDRPSACLYGDRL
                     VLRDDSSGRVVAGGHVVDPFSPDRRMRREQRAASLAAHAIAAPEDSFQALLAAEGWVD
                     QRRFMSARNLPVDFAPKASAEAIRIGSAASPVVVSAATISRVGRDLTRFLADWHAAHS
                     DQMGPGKAELLRAAGVVPAVVAEAILDVSRARGEVVREGLAWRLPAHQPVLPALDESA
                     WPRIKAALTAADLRPPRIRELATERATTPEEMQALLQRLERFGRLVGVAPNRFFLPET
                     ITALGEIAQELGESEEGGFTAAEFNKRSGIGRNLTIIVLEYLDSIGVTRRTGDLRHVV
                     RSAEEAMG"
     gene            complement(2246..>4266)
                     /locus_tag="VHX39_01660"
     CDS             complement(2246..>4266)
                     /locus_tag="VHX39_01660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEX3989856.1"
                     /translation="TRISGRPIAYMRAQGFQGGLYPINPNRAEVQGLKAYASINDLPE
                     TPDVAIVAVAAEVAAPAVEDLGKRGVKAIVMFTAGFAEMDEAGEVAQAKMVATARSYG
                     MRILGPNCLGVFDARRAYYATFSSSFDSGWPVPGRIGIASQSGAYGTHLYTLARNRGI
                     GASLCVMTGNEGDVTVGECIGWLAENSEVDVIAVYAEGIRESEGLIAALEAARAAKKP
                     IVMQKVGRSELGTKAAKSHTASIAGDDAVTEAVMAEFGVHRARNSEEMLDIAHTATRK
                     IYPARNTLGVITVSGGAGVLISDVAESVGLAMPEMPMATQKKLRDLVPFCAPRNPVDA
                     TAQVSNDVTLVKTFTEAMVQDGGYSSVLGFFSMTASSRRWPSIREQLNAVKTENPDRL
                     YVLSVITPPDSRDELEADGWVVHEDPTRAVVAIEAMGRYGEAFAAAAAAPAPVVPAVA
                     LPAKNPSEAEAKRLLAGAGIQSAPEAECATVEQAIAAAEGFGYPVVMKILSPDIVHKS
                     EIGGVLLDVIDANAVREGFALLLDRAKTAAPAAKLDGVLVAKQLKGGVECILGIHRDP
                     VFGPMAMFGLGGIFVEVLKDVVFRRCPFGADVAETMIRSIKGAPLLLGARGRKQADVK
                     ALAETLSRLSAFAAAAGPRLQSIDINPVFAMPQGEGAFAVDAVIEVGD"
BASE COUNT          825 a         1425 c         1279 g          737 t
ORIGIN      
        1 ccgcatccgg tgcaggatcg caccgatgag gaactgcaga aactggccga cgaccacctg
       61 gaggagattc ttgctttgtt ggtgaagcag gtctgaaggg ggacgtcggt ctgcgtgtgt
      121 gcgacggttc cattggacgc cgaggacgcg gagatttaga agggcgcgga gaggatccgt
      181 gatacgggaa gcttaagctc cgcgtcctcg gtgagtttgc cttggctgat gaaggaacca
      241 gacccgcact gggagaatcc gggcgcctga tttcaccggc cccggcaccc cgactttacc
      301 ccatcgcctc ctctgccgaa cgaacaacat gacgcaaatc gccggtgcgg cgagtgacgc
      361 cgatgctgtc gagatactcc agcacgataa ttgtgagatt gcgtccgatg ccggagcgct
      421 tattgaactc ggcagccgtg aaccccccct cttccgactc ccccaactcc tgggcaatct
      481 cgccaagcgc ggtaatcgtt tcgggcaaaa agaaacgatt gggggcaacg ccgaccaggc
      541 gcccgaaccg ttccagacgt tgcagtaacg cctgcatctc ttccggggtc gtcgcccgct
      601 ccgtcgccag ttcacgtatc ctgggggggc gcaaatccgc tgcggtcagg gctgctttga
      661 tccgaggcca cgcggactcg tccagcgccg gcaggaccgg ctggtgagcc ggcaaacgcc
      721 aggcgagtcc ttcgcgcacg acctcgccac gcgcccgcga cacatccagg atcgcctcgg
      781 ccacaaccgc cggaaccacg ccggcggcgc gcagcaattc cgctttccct gggcccatct
      841 ggtcagaatg cgcggcatgc cagtcggcca gaaaacgcgt cagatcgcgg ccgacgcggc
      901 tgatggttgc tgctgaaacc accacgggcg aggcggcgga cccaatgcgg atcgcctcgg
      961 cagacgcttt cggcgcgaaa tcaaccggca ggttgcgcgc tgacatgaag cggcgctggt
     1021 ctacccaacc ttccgccgcc agcaaggcct gaaacgagtc ttccggcgca gcaatcgcat
     1081 gtgcagcaag cgaggccgcg cgttgttccc gccgcatccg gcgatccgga gaaaacgggt
     1141 cgacgacatg gccgcccgcc accacacgtc cgctggaatc gtcacgcaac acgaggcggt
     1201 cgccataaag gcaggcactc ggccgatcga gcgcgatgct cacaaagccg gtttcacccg
     1261 gtgccagatc gctggccttt tgcatcaaca cgcggccggt cacgctggag gtgccgaaat
     1321 gaatgtgcat acgggatgcg tgacgcgcgc cgcggtcccc cactgcgcgc accaacgcgt
     1381 cgatccgttg cgttggcgca tgcaatgacg gatcgatcag ccaatcaccc cgtttcagcc
     1441 tggcccgctc gacccgaggt ccggagatcg ccagtgcaca gcggtcgccg gctcgtgccg
     1501 acacggccac ttcgttgtgc acctgaatgc cgcgcacccg ggcggctaac cgggacggcg
     1561 ataacagcag ccggtcgcca atcgtaacga tccccgaagt gacggtcccg gtgaccacca
     1621 gaccggcacc ggcaggcgag aaactgcggt cgatggcgag gcggaatccg ccggacgcat
     1681 cgcgcgcctc atgggctgcc gctttggcct cgatgctggc gagcaccgca ggaattccgt
     1741 ccaaggtgac gcccgaggcc tccagaatcg gtgtggtggc atagccggca tcgtccaaca
     1801 cgttgcgcac cgcctggcgc gccgcctcgc gttgcgtcgc gtccacccga tcgatcttgc
     1861 tgagtacggc ggtgacatca ctgatcccgg tcaggccgag gatcgacaga tgctcccgcg
     1921 tttgcggcat cggaccgtca tcggcggcga ccaccagcaa tacggtgtcg atcgacagca
     1981 ccacggcgag catattggcg agaaatcgtt cgtgcccagg aacgtcgacg aaaccgacca
     2041 tggcgccgga cggcagccga aggtgcgcga agccgagatc gatcgtcatg ccgcgctttt
     2101 tctcttccgg cagacggtcc gcgtcgatgc cggtcagcgc gcggatcagc gctgtcttgc
     2161 cgtgatcgac atggccggcc agagcaatga tcatggccca atcaggtccc gggtttaagt
     2221 ctcctcatgc aacgaacgct gcagctcaat cgccaacctc gatgaccgca tccacggcga
     2281 aggcgccttc gccctgtggc attgcgaaaa ccggatttat gtcgatcgac tgcaggcgcg
     2341 gaccggcggc agcggcaaac gccgacagtc gggacagcgt ttcggccaac gccttcacgt
     2401 ccgcttgctt acggccgcgg gcgccaagca acaaaggtgc acccttgatc gaccggatca
     2461 tcgtttcggc cacgtcggcg ccaaacgggc aacgccggaa cacgacatct ttcaggacct
     2521 caacgaagat gccgccgaga ccgaacatcg ccatcggccc gaacaccgga tcgcgatgga
     2581 tgcccaagat gcactccacg ccgcccttga gttgtttggc caccagcacg ccgtcgagtt
     2641 ttgccgcagg tgccgccgtc ttcgcgcgat cgagcaataa cgcaaaacct tcccgtaccg
     2701 cattggcatc gatgacatcc agcagcacgc cgccgatctc ggatttgtgc acaatatcgg
     2761 gcgacaggat tttcatcacg accgggtagc caaatccttc cgctgctgca atcgcctgct
     2821 ccaccgtcgc gcattccgcc tcaggtgcgg attgaatgcc ggcgccggcc agcaaacgtt
     2881 tcgcttcggc ctcggatggg tttttcgccg gcaaagcaac cgcgggcaca acgggcgcgg
     2941 gcgctgctgc tgcggcggca aaggcttcac cgtagcggcc catcgcctcg atggcgacca
     3001 ccgcacgtgt cgggtcttca tgcacgaccc agccatcggc ctccagttcg tcacgactgt
     3061 caggtggtgt aatgaccgac aacacgtaga gccggtcagg attttcggtt ttcaccgcat
     3121 tcagttgctc gcggatcgac ggccagcggc gcgatgacgc ggtcatgctg aaaaaaccca
     3181 ggactgagga atagccgccg tcctgcacca tcgcttcggt aaaggttttc accaacgtaa
     3241 cgtcgttcga aacctgagcc gtcgcgtcca ccggattgcg cggcgcgcag aacggtacca
     3301 gatcgcgcaa ctttttctgt gtcgccatcg gcatttctgg catcgccaac ccaacactct
     3361 cggccacgtc ggaaatcagc acgccggcgc caccggacac cgtaattact ccaagcgtat
     3421 tgcgcgccgg ataaatcttc ctcgtcgctg tgtgcgcaat gtcgagcatt tcctcggaat
     3481 tacgcgcgcg gtggacgccg aattccgcca tcaccgcctc ggtgaccgcg tcatcgccgg
     3541 caatcgaagc tgtgtgtgat ttcgccgcct tggtgccgag ttcgctgcgg ccaacctttt
     3601 gcatgacgat gggtttcttc gccgcacgag ccgcttccaa cgccgcaatc aggccctccg
     3661 attcgcgaat tccctcagca tagacagcga tgacgtcgac ctcggagttt tccgccagcc
     3721 agccgataca ttcgccaacc gtaacatcgc cctcattgcc ggtcatcacg cacagcgacg
     3781 cgccgatgcc gcggttgcgt gcaagagtat agagatgtgt gccataggcg ccggactgac
     3841 tggcgatgcc gatgcggccc ggcaccggcc aaccactgtc gaacgacgag gaaaatgtcg
     3901 cgtaatacgc tcgccgcgcg tcgaatacgc ccagacaatt ggggccaagg atccgcatgc
     3961 cgtacgaccg tgcggtggca accattttcg cctgcgcaac ttctccggcc tcatccatct
     4021 cggcgaaacc ggcagtgaac atcacgatgg ctttgacgcc gcgtttgcca aggtcctcca
     4081 cggcgggggc ggcgacctct gcggccacgg cgacgatcgc gacgtccggc gtttccggca
     4141 gatcgttgat cgaggcgtag gctttcagac cctggacctc ggcccggttc ggattgatcg
     4201 ggtaaagccc gccctggaac ccctgggcgc gcatataagc aatcggccgg ccggaaatcc
     4261 gcgtcg
//
LOCUS       DATAVD010000094         2405 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_8704, whole genome shotgun sequence.
ACCESSION   DATAVD010000094 DATAVD010000000
VERSION     DATAVD010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8704"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1178)
                     /gene="kaiC"
                     /locus_tag="VHX39_01665"
     CDS             complement(<1..1178)
                     /gene="kaiC"
                     /locus_tag="VHX39_01665"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF006799.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circadian clock protein KaiC"
                     /protein_id="HEX3989857.1"
                     /translation="MLRHLTKAASGIAGLDDITGGGLPSGRATLVCGGPGSGKTLLAI
                     TFLAEGALRRDEPGVLLSFDERIPEIETNCVSLGLDLADLQKRGLLATDYLHIERRDI
                     QETGEYDLEGLFIRLAYAVEKVNARRVVLDSIDTLFSGIPNEAIMRAELRRLLVWLKD
                     RGLSTIFTAERGDTTLTRHGIEEYVSDCVILLEQRVSEELATRRLRVIKYRGSSHGTN
                     EYPFLIEETGLSLIPVTSLGLAHVVSDQRVLSGTSGLDAMLEGKGFYQGSSILISGGP
                     GTGKTSIGAQFAHSVTQRGARCLYLAFEESESQLVRNMRTIGVDLRERIEQGSLTVSA
                     VRPTTHGLEMHLARIMHTIARLRPDVFVVDPLSALQMSGSAGQSELMVLRLIDFVKST
                     G"
     gene            1860..>2405
                     /locus_tag="VHX39_01670"
     CDS             1860..>2405
                     /locus_tag="VHX39_01670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEX3989858.1"
                     /translation="MFNYFRKELDWGGRKLVLETGKIARQADGAVLVSYGETIVLCTA
                     VGVKTAKPGQDFFPLTVNYQEKAFAAGKIPGGFFKREGRPSEAEVLKSRLIDRPIRPL
                     FPAGFRNEVQIVATVLSHDMENDPDIVSMIGCSAALTLSGIPFFGPVAAATVGYQDGA
                     YILNPTLTQTKTSQLQLVVAGT"
BASE COUNT          481 a          802 c          688 g          434 t
ORIGIN      
        1 ccggtggatt tgacgaaatc gataagccgt aaaaccatga gttccgattg gcccgcgctt
       61 ccgctcatct gtaacgccga gagcggatcg accacaaaga cgtcgggccg cagcctggct
      121 atcgtgtgca tgatgcgcgc caaatgcatc tccagcccgt gcgtggtcgg ccgcactgca
      181 ctcacggtca gcgatccctg ctcgatcctc tctcgcagat cgacgccgat cgttcgcata
      241 ttccgcacca attgtgattc cgattcttcg aacgccagat acagacagcg cgcgcctcgt
      301 tgtgtaacgg aatgggcgaa ttgcgcaccg atgctggtct tgccggttcc cggcccgccg
      361 ctgatcagga tgctggagcc ctgataaaat cccttgccct cgagcatggc atcgagtccg
      421 gaggtgccgc tgagcacacg ctgatccgac accacgtgcg ccaggcccag agaggtaacc
      481 gggataagac tcaggccggt ctcctcgatc aggaacggat attcgttggt accgtgtgag
      541 gagccgcgat acttgatgac gcgaagccgc cgcgtggcga gttcttcgct gacccgttgc
      601 tccagcagaa taacgcaatc ggaaacgtat tcctcgatcc catgccgggt taaagtggta
      661 tcaccgcgtt ccgcagtaaa aatggtcgaa agcccgcgat ccttcagcca caccagcagt
      721 cgccgcaatt cggcgcgcat gatcgcctcg ttgggaatgc ccgagaacag cgtatcgatg
      781 ctgtccagca ccacgcggcg ggcgttgacc ttttcgactg cgtaagccag tcggatgaac
      841 aaaccctcga gatcatattc gccggtttcc tggatatccc gccgctcgat gtgcaggtaa
      901 tcggtcgcca gcagtccccg cttttgcaaa tcggccaggt cgaggccaag cgacacgcag
      961 ttggtttcga tctccgggat ccgttcatcg aatgacagca gcacgccagg ttcatcgcgg
     1021 cgcagagcgc cttcagccag gaacgtgatg gccagcaacg tcttgccgga ccccggccca
     1081 ccgcacacga gcgtcgcccg cccagatggc aggccgcccc cggtgatatc gtcgagtcct
     1141 gcaattccac tggcggcttt ggtgagatgt cgaagcatct gctgattgcc tgacgcggtg
     1201 gtgaggttgg tgcgttacgt gcgcttgccg ctaaacccac aatgcgcaac ctcgcggaat
     1261 ggagcaacga caatgtcgtt cgccggacgt tcaggagagt tttaatggat cagtaacgat
     1321 tcattgacgc tgagatgatg cagcaacggc gacgacgtgc gtcccgcggt ccgatcgtgc
     1381 caggcggcgg ggcaacccga accgccggct gaccacgaga ttccccgcaa cccatgcgcc
     1441 cgaaaactcc ggcgcccgcc tccggaaagc agccgtccat tctgctaaaa ccatcaccag
     1501 cgatggcact cagacacact cgaaacgccc aatgccactt tttgcccgaa caaaaggtga
     1561 cgaacccccc cttcatccca tataggacgg agagacgacc ccgtgagcca tcctggcgtg
     1621 cgggcaacgc cgcggatcgc ggcggaccga cagaccgctg aaccggtgca agcccagaga
     1681 tggcgcggga cccgcgacgg cgtttccggt tacatggctc cggccgtgcc cccctggttt
     1741 tgccattggc ggtgcggccc actcccatgc gacccgagac gccgcctccc gaccaacccc
     1801 agggagcctg gctcaaccgg cttgccgtcc gccgatgccg tgcatcgtaa ggactgtgaa
     1861 tgttcaatta tttccgcaag gaactcgact ggggcgggcg caagctggtg ctggagacgg
     1921 gcaagattgc ccgccaggcc gacggagccg ttttggtttc atacggcgag accatcgtgc
     1981 tgtgtaccgc cgtcggcgtg aagaccgcca aaccgggcca ggatttcttc ccgctgaccg
     2041 tgaactacca ggaaaaagcc ttcgccgccg gcaagatccc cggcggtttc ttcaagcgcg
     2101 aaggccgtcc ctcggaagcc gaggtgctga aaagccgcct catcgaccgc ccaatccgcc
     2161 ccctgttccc cgccggcttc aggaatgagg tccagatcgt cgccaccgtc ctgtcgcacg
     2221 acatggagaa cgaccccgac atcgtctcga tgatcggctg ctccgccgcg ctgaccctgt
     2281 ccggcatccc gttcttcggc ccggtcgcgg ccgccaccgt cggctatcag gacggcgcct
     2341 acatcctgaa ccccactctg acccagacca aaaccagcca gttgcaactg gtcgtcgccg
     2401 gcacc
//
LOCUS       DATAVD010000095         2974 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2056151, whole genome shotgun sequence.
ACCESSION   DATAVD010000095 DATAVD010000000
VERSION     DATAVD010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2974
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2056151"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1474
                     /locus_tag="VHX39_01675"
     CDS             <1..1474
                     /locus_tag="VHX39_01675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989859.1"
                     /translation="MSLSITGFSPLRSSTATRYVSGEVAFASIFGLAVFASVLWLPAV
                     LRDADTLWHITTGNWILAHWAVPTVDTFSFTAAGRPWEAQEWLSEVILALAYRVADWN
                     GLMVLTALVSGATIGIVAFYVRRHMRLDIAVMFVLLTAACGGPSLLSRPHLIALPLLA
                     FWTMSLVSARARGVGPSLLLLPVMTVWANLHGGFMVGLVLAGALAVEAVFDPACRPAD
                     SIRSWGLFFVGAVVATVITPHGVDGLLFPFRLMSMKSLYSIQEWKPIDLSQLSGMTVA
                     ILVALYMGMTGAVRLPRFRVLLVTGLIFATLQHVRNAQVFAVVAPLLLANALGPARPV
                     MAREWILGGIAGLIAVASLCIRIGLPLERVDGGSYASAALAAVPQPLRTKPVLNDYGF
                     GGLMIFSGIKPFIDGRADLYGEKGMERYLSIIHANGDVLDDVLCRYHIAWTMFPPGAV
                     VSALMDRTPGWHRFYTDKFAVIHVRDADASQATCPVRADR"
     gene            complement(1471..2043)
                     /locus_tag="VHX39_01680"
     CDS             complement(1471..2043)
                     /locus_tag="VHX39_01680"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3989860.1"
                     /translation="MASAHPDWDVAESDTLEEHRSRLRSRSIDLLILEARLLGAELAK
                     SIPGHGRVSLAAAVIAVTEPGDSVGALGCLSAGAHATISRSDATSRMLATIKTVMNRR
                     HQPVVSAVTTPSPESSEVLNLTNRQLDVLRLLAKGQSNKVIARDLGLSVSTVKVHLNT
                     VFRALGASNRVEAVVRARPFDARVLVSQGH"
     gene            complement(2313..2780)
                     /locus_tag="VHX39_01685"
     CDS             complement(2313..2780)
                     /locus_tag="VHX39_01685"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE family protein"
                     /protein_id="HEX3989861.1"
                     /translation="MKPMARDTRGATTLEFALVSTLLMAMIFGSVELGLMMWTRGTLQ
                     AIAAQTARCAAISSTNCNNSATTPPTTPQTYAAAQATALLGAGLITSSDVSVTSVSVP
                     PTAGCLSTSPGTATFEVVTITVTPWVGVSASGKFGSYSPLGPATETVTACYPT"
     gene            complement(2777..>2974)
                     /locus_tag="VHX39_01690"
     CDS             complement(2777..>2974)
                     /locus_tag="VHX39_01690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989862.1"
                     /translation="ATLGPVVTVCARACSADGTLPAGILPGKYIVITATYQLTPFIPA
                     YTILKTVAEQTITETATVRLQ"
BASE COUNT          527 a          876 c          951 g          620 t
ORIGIN      
        1 gatgtcgcta tccatcactg gcttttcgcc tttgcgctcg tccaccgcga cccgttacgt
       61 gtccggtgaa gttgcgttcg cgtcgatctt cggtctggcc gtctttgcat cggtactgtg
      121 gcttccggcg gtgttgcgcg atgccgacac gctttggcac atcacgactg gcaactggat
      181 attggcccac tgggcggtac cgacagtcga tacgttctcc ttcaccgccg ctggaaggcc
      241 gtgggaggcc caggaatggc tgtcggaggt gatcctggcg ctcgcatacc gcgtggcgga
      301 ttggaacggc ctgatggtgc tgacggcatt ggtttcaggc gctaccattg gcatcgtggc
      361 cttttacgta cggcgccata tgcggctgga tatcgccgtg atgttcgtac tgctgaccgc
      421 cgcctgtggc ggcccgtcgt tgctgtccag gccacatctg attgcgttgc cgctactggc
      481 gttttggacg atgtcgctgg tttcggcgcg ggcacggggc gtcggaccgt cgttgcttct
      541 gctgccggtg atgaccgtct gggcgaacct gcacggcggg ttcatggtcg gattggtcct
      601 ggccggcgcg ctggcggtcg aagccgtgtt cgacccagcc tgccggccgg ctgattcaat
      661 ccgctcatgg ggcttattct tcgtgggggc ggtcgtcgcc acggtcatca cgccgcacgg
      721 ggtcgacgga ctgctgtttc catttcgact catgtcgatg aagagtcttt attcgataca
      781 agagtggaag ccgatcgatc tgagccaact aagcggaatg acggtcgcaa tcctggtggc
      841 gctctatatg ggcatgacgg gggcggtgcg actgccgcgg ttccgcgtgc tgctggtgac
      901 cggactgatc ttcgccacct tgcagcacgt gcgcaatgcc caggtgttcg ctgtggtggc
      961 acctctcctg ctggccaacg cactcggccc ggcgcgcccc gtgatggctc gggaatggat
     1021 tttgggtggg atcgccggcc tgatcgcggt cgcttcgctt tgcatccgga tcggattgcc
     1081 actggaacgg gtggacggcg gcagctatgc ctcggcagcc ctggccgcgg tgccgcaacc
     1141 attacgcaca aagccggtgc tgaatgatta tgggttcggc ggcctgatga tcttctcggg
     1201 gatcaagccg ttcatcgatg gacgtgcgga tctatacggc gagaaaggca tggaacgcta
     1261 tctgtcgatc attcatgcga acggagacgt cctggacgac gtgctgtgcc gctatcatat
     1321 tgcgtggacg atgttcccgc cgggcgcggt ggtgtccgcg ctgatggatc gcacgccagg
     1381 ttggcaccgc ttctacaccg acaaattcgc cgtcatccac gtgcgggatg cggacgcctc
     1441 ccaggccacc tgcccggttc gggcggaccg ttaatggcct tgagacacca ggacgcgggc
     1501 gtcgaacggc cgggcacgca ccacagcctc aacccggttg cttgcaccta gggctcggaa
     1561 cacggtgttg agatggactt tcacggtgga aaccgacaag ccaaggtcgc gcgcgattac
     1621 cttgttggac tgccctttcg ccagcaggcg gagcacgtcg agctgccgat ttgtcagatt
     1681 gaggacttcc gaactttccg gagatggcgt ggtaacggcg gaaacgaccg gctgatgacg
     1741 tcggttcatc acggtcttga tcgttgccag catgcggctt gtggcgtcgg atcgcgagat
     1801 cgtagcatgc gccccagcgc tgaggcagcc cagcgccccg acggaatcac cgggttcggt
     1861 caccgcaatg accgccgcgg ccaggctcac acgtccatgg ccggggatgg attttgccag
     1921 ttcggcaccc agcagacgcg cctccaggat cagcaggtca atcgaccggc tgcgtaggcg
     1981 ggaccgatgt tcttcaagcg tgtccgattc cgcgacgtcc caatcaggat gcgccgatgc
     2041 caacaaagca accaacccca ggcggaaaac cggttgcggg tccgctatga gaacattttc
     2101 gcatctgaag gccgtcggcc cgtcatacat cgtaacccca ctcaccgcat gcccggcatg
     2161 agatcgtcac atttcaatag attgcaacaa aaaacgccgg aaacaaccca ttcccatgcc
     2221 attataaccg gacacattcg cgttagcgat gggaatctag ggaaatttgc aactttttgg
     2281 taaccgacac gacaaggaag ccgccgccgg cattacgtgg gatagcaggc tgtaacagtt
     2341 tccgtggccg gtcccagcgg gctgtagctg ccgaatttcc ccgatgcgct gacgccgacc
     2401 cagggcgtga cagtgatcgt cacgacctcg aaagtggcgg tgccgggcga cgtggacagg
     2461 catccagcgg tgggcggaac gctgacgctc gtaacgctca catcgctcga tgtgatcaat
     2521 ccggctccca gcagggccgt cgcctgagcc gccgcgtacg tctgaggggt cgtaggaggg
     2581 gtcgtggccg aattgttgca gttggtggag ctgatcgcgg cgcaacgtgc cgtctgggcc
     2641 gcaatggcct gaagcgtccc ccgtgtccac atcatcaggc ccagttcgac gctaccgaag
     2701 atcatcgcca tcagaagggt agagacaaga gcgaactcca gcgtcgttgc gcctctggta
     2761 tcccgggcca tcggtttcat tgcaaacgta ccgtggctgt ctcggtgatg gtctgttcgg
     2821 ctacggtctt gagtatggtg tacgcgggaa tgaagggtgt aagctggtat gttgctgtta
     2881 taacgatata tttcccaggc aagatacccg cgggcaaagt gccgtcggct gagcaagccc
     2941 tggcgcagac agtgaccacg ggccccaggg tcgc
//
LOCUS       DATAVD010000096         2606 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_381491, whole genome shotgun sequence.
ACCESSION   DATAVD010000096 DATAVD010000000
VERSION     DATAVD010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2606
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_381491"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /locus_tag="VHX39_01695"
     CDS             <1..511
                     /locus_tag="VHX39_01695"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3989863.1"
                     /translation="PEKGIDRAIRIAGHCGVPLKVAAKVDKVDREYFDEQIAPMIKSG
                     NVEYIGEINDKDKSEFLSGALALLVPIDWPEPFGLVMIEAMACGTPVIAFNCGSVPEV
                     IDDGLTGFIVRDEAEAVAAVHKVHTLDRTAVRETFDRRFTARRMAEDYLDVYDSLAQP
                     TRRLRAVSG"
     gene            complement(966..2333)
                     /locus_tag="VHX39_01700"
     CDS             complement(966..2333)
                     /locus_tag="VHX39_01700"
                     /inference="COORDINATES: protein motif:HMM:NF033540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HEX3989864.1"
                     /translation="MTASLVEGIADAFAALTVRYRPFFRTRTRNCAVVAMRYLSGLAQ
                     ATVCQFASMAAVVEAGCAQQFQHFISNSPWDHAPVVAQIGRDAEQLLGGKPDSCLIID
                     ECSFPKQGDRSVGVARQWSGRLGKVDNCQVAVFGVLTDGHRHVPVDMRLYLPKPWLAN
                     PARCDEAGVPESARKPTSKSGHALDIVREARIRGLRFNWVGVDAGYGKEPAFLRSLDA
                     MNEVFVADVHRDQRVWTDEPELRIPPHKPGRGRPATQRQAATPSVTVEALVATFGMAD
                     WTRCTLRDSTRGELRVDLADRRVWLWDGEEASPRCWHLIVRREVGSPKTLKYTLSNAP
                     AETSVLRLGQMQGHRYWVERTFEDAKGHCGLGDYQVLGWRAWHHHVTMVMLAMLFIAE
                     QRAAHQPGLELLTPRDIVEMLKETLPHKPEGRDALIARINQRHARRRGAIESRYRTQQ
                     KTVLP"
BASE COUNT          448 a          855 c          808 g          495 t
ORIGIN      
        1 gcccgagaag ggcatcgacc gcgccatccg catcgccggg cattgcggcg tcccgctcaa
       61 ggtcgccgcc aaggtcgata aagtcgaccg ggaatatttc gacgagcaga tcgcgccgat
      121 gatcaaatcc ggcaatgtcg aatatatcgg tgagatcaac gacaaggata aatcggagtt
      181 cctgagcgga gccctggccc tccttgtgcc gatcgactgg ccggagccgt tcggcctggt
      241 gatgatcgag gcgatggcct gcggcacacc ggtcatcgcg ttcaactgcg gctccgtgcc
      301 ggaggtgatc gatgatggcc tcacgggctt catcgtccgg gatgaggcgg aagccgtcgc
      361 cgccgtgcac aaggtgcaca cgctcgaccg gaccgcagta cgtgagacct tcgaccggcg
      421 cttcaccgcc cgacgcatgg cggaagacta cctggacgtc tacgattccc tggcccagcc
      481 gacccgccgc ctgcgggccg tgagcggctg accgcaacgc cggtcgggcc acaatccagc
      541 accgggcggt gccgccgccc ggtgttccgt gtaccggcct gactgccgca accggcgttc
      601 tgcgctacgc tatttcctgg accgcgttaa tttgacagag tcgcattaat tggcatgatt
      661 tttgcccatg agtttgctgt ttgccgacga tgcgctgcgc gatgcaaagc ttgcatggtt
      721 gagcccattt tggcggctgg tcctgtggtc acggaaccgt ttccgtttgg tttgcaggtt
      781 tcagcctcgc tcaacgtcct gcaacagctt gtggcatcgc cagttccggg tccgattcat
      841 gtgccatgag cggctcggcg atgaacggat caccggcctc acaatcatat atgcgggcgt
      901 catgctcacc gcgctgaatt cggctgcctg ttgggtgacg gatcggcggc aagtcccgtt
      961 cgttctcaag gcagtacggt cttctgctgc gtacggtagc gggactcaat ggccccgcgc
     1021 cggcgtgcgt ggcgctggtt gatccgggca atcagggcat cgcggccctc cggcttgtgc
     1081 ggcaaggtct ctttcaacat ctcgacgata tcacgtggtg tcagcaattc caggcccggc
     1141 tgatgcgccg cccgctgttc ggcaatgaac agcatcgcca gcatcaccat cgtcacgtgg
     1201 tggtgccagg ctcgccatcc cagcacctga taatccccaa ggccgcagtg gcctttggca
     1261 tcctcgaagg tgcgctccac ccagtaacgg tgcccctgca tctggcccag acgcagcacc
     1321 gacgtttcag ccggcgcatt ggacagcgtg tatttgagcg tcttcggcga tcccacctcg
     1381 cggcggacga tcagatgcca gcaccgcggc gaggcttcct cgccatccca cagccagacc
     1441 cgccggtctg cgaggtcgac gcgcagttcg ccgcgcgtgc tgtcgcgtaa ggtgcagcgc
     1501 gtccagtccg ccatgccgaa cgtggcgacc agagcttcca cggtaacgga tggcgtcgcg
     1561 gcctgccgct gcgtcgccgg acggccgcgg cccggcttgt gcggcggaat gcgaagttcg
     1621 ggttcgtccg tccaaacccg ctggtcgcga tgcacatcgg cgacaaacac ctcattcatg
     1681 gcgtctagag atcgcagaaa agccggttcc ttgccgtaac cggcgtcgac gcccacccag
     1741 ttgaatcgca ggcctcggat gcgggcctca cgaacgatgt cgagcgcatg cccgcttttc
     1801 gaggtcggct tgcgcgcgct ctccggcacc ccggcttcgt cgcagcgggc cggattggcg
     1861 agccagggct tcggcaaata aagccgcata tcgacgggca catgccgatg gccgtccgtc
     1921 aacacgccga agaccgcgac ctgacaatta tccaccttgc ccagacgccc cgaccattgc
     1981 cgagccaccc caaccgaccg gtcgccttgc ttgggaaagc tgcactcgtc gatgatcaga
     2041 caactgtccg gcttgccacc aagcagttgt tccgcgtcac ggccgatctg cgcaaccacc
     2101 ggcgcgtggt cccatggcga gttgctgatg aagtgctgga actgctgcgc gcagcccgcc
     2161 tcaaccacgg cagccatcga ggcgaactgg cagaccgtgg cttgcgccag cccgctgagg
     2221 tagcgcatgg cgaccaccgc acagttgcgc gtgcgggtgc ggaagaaggg cctgtaccgg
     2281 acggtcaggg ccgcgaaggc gtccgcaatg ccctcgacca gcgatgcggt cagttattgt
     2341 ccgcacatgc ggttacctga cgatgcacct cggtcatgtc gcccctccag tcgcgtattc
     2401 actggttgcc cagtgattcg acactcggcg ccggtgtcaa gtgcgatctc tccgccggtc
     2461 cgccgatcgt catcggctgg tctggtctgg tctggtctgg ttaccagccc ggcgggaatg
     2521 tgattgtgtc aaagtagccg tacggcgcca cggggccgct agaacgcttt caccctgact
     2581 gtgcagggga aagcgctcta tggatt
//
LOCUS       DATAVD010000097         1880 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1124852, whole genome shotgun sequence.
ACCESSION   DATAVD010000097 DATAVD010000000
VERSION     DATAVD010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1880
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1124852"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..247)
                     /locus_tag="VHX39_01705"
     CDS             complement(<1..247)
                     /locus_tag="VHX39_01705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3989865.1"
                     /translation="MTSMYDQDLAKNQANFAPLTPLTFLERAAYVYPDRLSVVHGTQS
                     FTWAQTYARCRRLASALTRIGVGKNDTVSVMLPNTPPM"
     gene            360..1631
                     /locus_tag="VHX39_01710"
     CDS             360..1631
                     /locus_tag="VHX39_01710"
                     /inference="COORDINATES: protein motif:HMM:TIGR00200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family nicotinamide mononucleotide
                     deamidase-related protein"
                     /protein_id="HEX3989866.1"
                     /translation="MRIEILCTGDEVLTGKIVNTNFSYMAQKLEDVGLSVHWGTTVGD
                     DRESLLNAFRLAGERADAVIVNGGLGPTIDDLSQEIAAQAAGVELVLHEEWLTRMESF
                     FSRRARSMPPNNRKQAMLPATAEMIDNPIGTACGFAMDIGRARFFFTPGVPRELRRML
                     EEQVIPRILARSGAPASIYLKRFHSYGIGESHADQLLTGVEALDPEGGVKLGFRAHYP
                     QLETKLTVRGKDMDDVGRKLAPITTEVRKRLGNFIMAEDDQTLEGVVVAELTKKQATL
                     SVVETFTAGQIAARFAHLPNAEHVFRRGVVVRHFSELHNIYGLDGVGLSGEMTEEATI
                     AVARAAREQTGATHSLVVLIDLDDGADRIDFGGTIWIGIATEAGVDVRRSRILGGRDW
                     VRLGSVEMGLDCLRRQLQGLPVVERIDFERT"
     gene            1634..>1880
                     /locus_tag="VHX39_01715"
     CDS             1634..>1880
                     /locus_tag="VHX39_01715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3989867.1"
                     /translation="MSTRIGREIDSRYAWFRLGISIVLSAVGGVGMWSVVVALPAVQA
                     EFGVARGGASLPFTLTTIGFGVGGVLMGRVSDRFGIVV"
BASE COUNT          332 a          562 c          620 g          366 t
ORIGIN      
        1 ccatcggcgg cgtgttcggc agcatcaccg agaccgtgtc attctttccc accccgatcc
       61 gggtcagcgc ggacgccagc cggcggcacc ttgcgtaggt ctgagcccag gtgaagctct
      121 gcgtgccgtg cacgacagac agccggtcgg gatagacgta agcggcacgc tccaggaagg
      181 tcagcggcgt gagtggcgcg aaattcgcct gattcttggc caggtcctga tcatacatgc
      241 tggtcatggg tcgtctccct gcgttgccaa tctacacgga accggcgcac caggaaattg
      301 ccaggctctt gcccaacgcc gctgcatccc gcacgttgac tgctggaatg ggaggcacca
      361 tgcggatcga aattctgtgc accggcgatg aagtgctgac cggcaagatc gtcaatacca
      421 acttcagcta tatggcacag aagctggagg acgttgggct gtcggtgcac tggggcacca
      481 cggtcggtga cgatcgggaa tccctgctca acgcgttccg tctggccgga gaacgggccg
      541 atgcggtgat cgtcaatggc ggccttggcc cgaccatcga cgatctgtcg caggagatcg
      601 cggcccaggc ggcaggggtt gaactggtgc tgcatgaaga atggctgacc aggatggagt
      661 cgttcttctc gcgccgcgcc cgctccatgc cgcccaacaa ccgcaagcag gcgatgctgc
      721 cggcaaccgc cgagatgatc gacaacccga tcggcaccgc ctgcggattt gccatggaca
      781 tcggccgcgc acgattcttc ttcaccccgg gtgtgcctcg cgagttgcgg cggatgctgg
      841 aggaacaggt gatccctcgg atcctcgctc gctccggcgc accggcatcg atctatctga
      901 agcggttcca ctcgtatggg atcggcgaat cgcatgccga tcagttgctg accggggttg
      961 aggcgctgga tcccgaaggc ggcgtcaaac tcggattccg cgcgcattat ccgcaacttg
     1021 aaacgaaact gacggtgcgc ggcaaggaca tggacgatgt cggccgcaag ctggccccga
     1081 tcacgaccga ggttcgcaag cggcttggca atttcatcat ggccgaggac gaccagacgc
     1141 tggaaggcgt cgttgtggcc gagctgacca agaaacaggc gacattgagc gtggtggaaa
     1201 ccttcaccgc cggccagatt gcggcgcgtt tcgcgcatct gccgaacgcc gagcacgtgt
     1261 tccgccgcgg tgtcgtggtg cggcattttt ccgaattgca caacatttac ggcctggacg
     1321 gtgtcggttt gtccggcgaa atgaccgagg aagccaccat tgccgtcgcc cgggcggcgc
     1381 gcgagcaaac cggtgccacg cactcgctgg tcgtgttgat cgacctggat gacggtgccg
     1441 acagaatcga ctttggcggc acgatctgga ttggcatagc gaccgaagcg ggggtcgacg
     1501 tccgccgctc gcgcattctt ggcggacgtg actgggttcg tctgggctcg gtcgaaatgg
     1561 gcctggattg cctgcgccgg caactgcagg gcctgcccgt ggtcgaacgg atcgatttcg
     1621 aaagaacctg acgttgtcta caagaattgg gcgcgaaatc gactcccgtt acgcctggtt
     1681 tcgactgggc atttccatcg tgctgtctgc cgtcggcggc gtgggcatgt ggtccgtcgt
     1741 cgttgctttg ccggcagtgc aggcggagtt cggcgttgcc cgaggcggcg cctccctgcc
     1801 cttcacgttg accacaatcg gcttcggtgt gggtggcgta ctgatgggcc gcgtgtcgga
     1861 tcggttcggc atcgttgtgc
//
LOCUS       DATAVD010000098         1833 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2242230, whole genome shotgun sequence.
ACCESSION   DATAVD010000098 DATAVD010000000
VERSION     DATAVD010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2242230"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /locus_tag="VHX39_01720"
     CDS             complement(<1..456)
                     /locus_tag="VHX39_01720"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3989868.1"
                     /translation="MTAQGTGSGEETLAQLRRNGTGIHYETHGSGAPILLTHGVGATC
                     RMWDEQVEEFTDRYRLILWDLPGHGQSEPSKRKVTANSLTRDILAILNATEASRAVLV
                     GLGAGGLIALRAWHELPNRVRGLVLIGTMPGLRNGPARQIWNGPVDEFAA"
     gene            532..1317
                     /locus_tag="VHX39_01725"
     CDS             532..1317
                     /locus_tag="VHX39_01725"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX3989869.1"
                     /translation="MGHAAYEHIAVSYTGFIATIEVRRGPNNFIDTDMVAEIADALDE
                     YDRTPEIRAIVLCAEGKHFCAGADFGSRGPDGVMRTAKRGRHLYKEAQRLWKTGKPIV
                     AAVHGAAVGAGVGLAVMADFRVTCPEARFSTNFTRLGFHPGFGLTATLPRLIGEQKAA
                     MLLYTGRRLTGEEALAIGLADYCVPLEQVRAKAVEIATEIGQSAPLAIIATRETLRRG
                     LAEAVARATEREYEEQDWLRNTADFKEGTKAMGERRLPNFQAR"
     gene            complement(1336..>1833)
                     /locus_tag="VHX39_01730"
     CDS             complement(1336..>1833)
                     /locus_tag="VHX39_01730"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEX3989870.1"
                     /translation="VEQGLRVIRLRPSNHTGAGQSSGLVVASFARQVARIEAGLQAPV
                     IEVGNLEPRRDFLDVRDVCAAYIACIARRDVIAPGTIFNLSSGEARRVGDVLDALIAT
                     AGIAVEIRVDPRRIRTTDVNLAWCDAARAREALGWAPNKPWQQTLQDVLDDWRRRIAT
                     DPASP"
BASE COUNT          348 a          577 c          584 g          324 t
ORIGIN      
        1 ggccgcaaat tcgtccaccg ggccattcca gatctggcgc gcgggaccat tgcgcaggcc
       61 cggcatggtg ccgatcaaca ccaggccgcg cacacggttg ggaagttcgt gccaggcccg
      121 cagcgcgatc agtccgccag cgccaaggcc gaccaacacg gcgcggctcg cctctgttgc
      181 attgagaatg gccagtatgt ctcgcgtcag gctgttcgcg gtcaccttcc gtttggacgg
      241 ctcactttgg ccatgaccgg gcaaatccca caggatcagg cgatagcggt cggtgaattc
      301 ctcgacctgc tcgtcccaca tccggcaggt cgcgccaacg ccgtgcgtca gcaggatcgg
      361 cgcgcccgat ccgtgcgtct cgtaatgaat gcccgtgccg tttcgccgca actgagccaa
      421 cgtttcctca cctgagcccg tcccctgggc cgtcattgtc ccgcaggaca tcccccggta
      481 aactcgcacg cggagtgata cgttgaaaga tcaggacgcg aggaagcagt catgggccac
      541 gcagcatacg aacacatcgc cgtttcctac accggtttca tcgccacgat cgaggtgcgg
      601 cgtggaccaa acaattttat cgacaccgat atggttgccg aaattgccga tgcgctcgac
      661 gaatatgacc gcacgcccga gatccgtgcg atcgttctgt gcgcggaagg gaagcatttt
      721 tgcgcgggtg ccgatttcgg cagtcgcggg ccggacggcg tgatgcgcac ggcaaagcgt
      781 ggccggcatt tgtataagga agcgcaacgg ctgtggaaaa ccggcaagcc gatcgtcgcc
      841 gccgtgcatg gggcagcggt cggcgcggga gtcggtctcg ctgtcatggc ggatttccgg
      901 gtgacctgcc cggaggcgcg gttctccacc aatttcacgc ggcttggctt tcatccgggc
      961 tttggcctga ctgctacgtt gcctcggctg atcggtgagc agaaggcggc gatgctgctg
     1021 tataccggtc gccggctgac cggcgaggaa gcgttggcga tcggcctcgc cgattactgc
     1081 gtgccgctgg aacaggtgcg tgcaaaggca gtcgagatcg cgaccgagat cggccaatcc
     1141 gcgccactgg caattatcgc gacacgggag acgctgcggc gtggcctcgc cgaggcggtg
     1201 gcgcgggcca ctgaacgcga atacgaggag caggattggc tgcgcaacac cgccgacttc
     1261 aaggaaggca ccaaagcgat gggggagcgg cgtttgccga actttcaggc gcgataagaa
     1321 aactgcaata ccggcctacg gacttgccgg gtcggtagcg atccggcgcc gccaatcgtc
     1381 caacacgtcc tgcaatgtct gctgccatgg tttattcggc gcccatccaa gcgcttcgcg
     1441 cgcacgagct gcgtcgcacc aagccaggtt cacgtcggtc gtgcggatgc gccgtgggtc
     1501 gacccgtatt tcgactgcaa tgccggcggt agcaatcagc gcgtccaaca cgtcgccaac
     1561 gcggcgcgcc tcgcccgacg aaagattgaa aattgtcccg ggggcaatga catcccgacg
     1621 ggcgatgcaa gcaatgtagg ctgcgcacac atcccggaca tcgaggaaat cccgtcgggg
     1681 ttccagattg ccgacctcga tcaccggggc ttgcagtccg gcctcgatac gcgccacctg
     1741 gcgagcaaaa gatgctacga ccaggccgga actctgtccg gccccggtat gattcgatgg
     1801 tcgcaggcgg atcacgcgca ggccttgttc aac
//
LOCUS       DATAVD010000099         2876 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3546660, whole genome shotgun sequence.
ACCESSION   DATAVD010000099 DATAVD010000000
VERSION     DATAVD010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2876)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2876)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2876
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3546660"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(101..277)
                     /locus_tag="VHX39_01735"
     CDS             complement(101..277)
                     /locus_tag="VHX39_01735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989871.1"
                     /translation="MDVRKAKRVIEGLFDKPEAVVDLPMVEDTKVLIDELAKSGIRAS
                     VRVAASVAATIAAP"
     gene            complement(348..683)
                     /locus_tag="VHX39_01740"
     CDS             complement(348..683)
                     /locus_tag="VHX39_01740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989872.1"
                     /translation="MPLWRPEDILFQLDDEMTSDPVVTIVAVTPAGNFVIMTEPTAIG
                     SKLVLHRTHVQGARPNVVGAANLKILAQALLERFGYDEAIVEGAARTTGSRPGSRPRD
                     LRFRRRAPS"
     gene            993..2345
                     /gene="carA"
                     /locus_tag="VHX39_01745"
     CDS             993..2345
                     /gene="carA"
                     /locus_tag="VHX39_01745"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEX3989873.1"
                     /translation="MPVPIDDIIERLGGPEPAARLTGVTTEAVRKWRQAGTIPSRHWA
                     AVSAATGLPMDEFRGDLPAANGDTPPGATAALVLADGAVFWGRGFGAHTAMPAPVGEI
                     CFNTGMTGYQETLTDPSYAGQIITFTFPHIGNVGTNLEDIEAASVAARGLVVKQDLTE
                     PSNWRSTQHLDVWLRARRIPGVSGVDTRALTTRIRDGGPPTGVLAFPADGRFDLAALR
                     VQAEAWPGLEGMDLAKDVTCLQPYDWDESSWAWPTGFGRQTEPKRHVVAVDYGAKRNI
                     LRCLAAAGCRVTVVPATASGEDILRHQPDGVFLSNGPGDPAATGEYAVPAIQSVLAQG
                     IPVFGICLGHQLLALALGAKTFKLDRGHRGANQPVQDLTTGKVEITSQNHGFAVDLNS
                     LPETVTPTHVSLFDGSNEGLACTDRPAFSVQYHPEASPGPSDSHYLFERFVEMIDRAG
                     "
     gene            2347..2622
                     /locus_tag="VHX39_01750"
     CDS             2347..2622
                     /locus_tag="VHX39_01750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989874.1"
                     /translation="MNPRDLLLTTAFRHRINEPNIEAGFEQFIALTDRSVSYDAFCDA
                     VAGSLRDGLIREPIRLPEGALQCHWHLELTPAGVAEARRLLSDQHPD"
     gene            2629..>2876
                     /locus_tag="VHX39_01755"
     CDS             2629..>2876
                     /locus_tag="VHX39_01755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003622820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989875.1"
                     /translation="MPKRTDIQSIMIIGAGPIIIGQACEFDYSGAQACKALKAEGYRV
                     ILVNSNPATIMTDPGLADATYVEPITPEIVEKIIARERP"
BASE COUNT          543 a          943 c          876 g          514 t
ORIGIN      
        1 tgggtgagaa aagtgacaac gtcggtggcg gcacgttgcc aaccggctcg acgcgaaacc
       61 gatacggaac ggccaggaag cagcgtccgc gcgagcgttg ttacggcgcc gcgatggttg
      121 ccgcgaccga ggcggcaacc cgcacactcg cgcggatacc cgatttggca agttcgtcga
      181 tcaggacttt ggtgtcctcg accattggca ggtcaacaac cgcctcgggt ttatcgaaca
      241 acccctcaat tacccgcttg gccttccgaa catccattcc gccgcgaacc agtgctctcg
      301 ttgcggagat cgtctctggg aggcctcctc caggcggacg aagcagacta agaaggagcg
      361 cgacggcgga accggaggtc cctcggacgt gagccgggac gcgatccagt tgttcgagcc
      421 gctccttcaa cgatggcttc atcgtaaccg aacctctcca acagcgcctg cgccaggatc
      481 ttcaggtttg ccgcacctac tacatttggc ctggcacctt gcacatgtgt ccggtgcagc
      541 accaatttgg atccgattgc cgtcggctca gtcatgatga cgaaattgcc tgccggcgta
      601 acggcaacga tggtgacaac gggatccgac gtcatctcat cgtcgagctg gaacaggata
      661 tcttcgggcc gccacaaggg catgtcgggt atctccggca aaacttgctt tgcgattgag
      721 acacccggag aagccccgtt ccggtccggc cgaggcaaca atagcgcgca atgataccgc
      781 gaagcaaacg aatcacgttc ggaggcgctg aaggcgcctg ccggggcctc gcgtccatcg
      841 gagtggtcgt tgggccccgt atcaatggac gcctctctgg ggcgtcacgg agaatgaagg
      901 cttgcgtcga cgttcgcctc ggcgggagag attttccgcc cacgctcgtt cccggcttgg
      961 tcccggaaat aatttccgct acactccccc ttatgccagt ccccatcgac gacatcatcg
     1021 agcgtctcgg cggccccgag ccagccgccc gcctgaccgg tgtcaccacc gaagccgtgc
     1081 gcaaatggcg ccaggccggc acgatcccct cccgccactg ggccgcagtc agtgccgcca
     1141 ccggcctgcc aatggacgaa ttccgcggtg acctcccggc cgccaacggc gacacaccgc
     1201 cgggagcgac ggccgctctg gtcctggccg acggcgccgt attctggggt cgcggcttcg
     1261 gtgcccacac cgccatgccc gcgccggttg gagaaatctg cttcaacacc ggcatgaccg
     1321 ggtatcagga gacgctgacc gacccgtcct acgccggcca gatcatcacc ttcacattcc
     1381 cccacattgg caatgtcggc accaacctgg aggacatcga ggccgcctcg gtcgctgccc
     1441 gagggctggt tgtgaagcag gacctcaccg aaccgtccaa ctggcgctcg acccagcatc
     1501 tggacgtatg gttgcgcgca cgccgcatcc ccggtgtgtc cggcgtcgac acccgcgcgc
     1561 tcaccacacg gatacgcgac ggcggaccac caaccggcgt attggccttc cctgctgacg
     1621 gccggttcga tctcgccgcc ttgcgcgtcc aggcggaggc gtggccagga ctggaaggga
     1681 tggatttggc gaaggacgtt acttgtctcc agccctacga ctgggacgag tcctcgtggg
     1741 cctggcccac cggcttcggg cggcaaaccg aaccgaaacg gcacgtcgtg gcagtcgatt
     1801 acggggccaa gcgcaacatc cttcggtgcc ttgccgctgc gggatgccgg gttaccgttg
     1861 taccggccac cgcctcgggc gaggacattc tgcggcacca gccggatggg gtgttcctgt
     1921 cgaacggtcc gggcgatcct gcggcgaccg gggaatacgc ggttccggca atccagtcgg
     1981 tactggcgca aggaattccg gtattcggga tttgcctcgg ccatcagttg ctcgcgctgg
     2041 cgctgggggc gaagacgttc aagctcgacc gcggccatcg aggcgccaat cagccggtgc
     2101 aggacctgac cacaggcaaa gtcgaaatca ccagtcagaa tcacgggttc gcggtggacc
     2161 tgaacagttt gccggaaact gtgacgccga ctcacgtatc gctgttcgac gggtcgaatg
     2221 aggggctggc ctgcaccgac cgcccggcct tcagcgtcca gtatcatccg gaggccagcc
     2281 caggacccag tgacagtcat tatctgttcg aacggtttgt cgagatgatc gaccgggcgg
     2341 gttaagatga accccaggga tctgctgctt accactgcgt tccgccatcg catcaacgag
     2401 ccgaacattg aagctggctt cgaacaattc attgcgttga ccgaccggtc ggtgagctac
     2461 gatgcattct gcgacgctgt tgccggttcc ctgcgtgacg gcctgatccg cgaaccgatc
     2521 cgcctgcccg agggtgcgtt gcagtgccac tggcacctcg aattaacgcc cgcgggcgtc
     2581 gcagaggcgc gccgtttgct gtctgaccaa catccggact gaaagcccat gcccaaacgc
     2641 accgacatcc agtccatcat gattatcggc gccggtccga ttatcatcgg tcaggcctgc
     2701 gagttcgact attccggcgc gcaggcgtgc aaggcgctga aggcggaggg ataccgggtg
     2761 atcctggtca actccaatcc cgcaacgatc atgactgatc cgggccttgc cgatgccacc
     2821 tacgtcgagc caatcacgcc ggagatcgtc gaaaagatta ttgcgcgcga gcggcc
//
LOCUS       DATAVD010000100         3589 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1498069, whole genome shotgun sequence.
ACCESSION   DATAVD010000100 DATAVD010000000
VERSION     DATAVD010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3589
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1498069"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..753
                     /locus_tag="VHX39_01760"
     CDS             <1..753
                     /locus_tag="VHX39_01760"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3989876.1"
                     /translation="GLSYFVLDMKQPGVTVHPLKQMNGHASFNQVFITDAVVPPDMLV
                     GEVGQGWAVTTTTLMHERRGADGLRSWAQGSDKPGRCYEEERAEIKTTMEPYKWYPQR
                     AGRVDLIVPRAKETGHYDDPVIRQEIAKVLIMSKAAEWTARRARTAQEQGRPQGPEGS
                     LGKLASSHIARAAARVHTQLTGADALLTGDASPMGGVIAEILVSVPATSIAGGTDEIQ
                     HNIIAERVLGMPREASVDTGKPFRDVPRNTVG"
     gene            complement(886..>3589)
                     /locus_tag="VHX39_01765"
     CDS             complement(886..>3589)
                     /locus_tag="VHX39_01765"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3989877.1"
                     /translation="YLSNYAAISMADELARVPGVGNVVIFGVGQYAMRVWLDPDALRN
                     RGLVPADVIGAIQQQSQQVTGGQIGTPPAPEGQGFQYTLNVEGRLADPAQFANIIVKV
                     NSANGGQITRVRDVARVELGAQTYAQSFALDGKPSAGIAIFQLPNANALNVAGLVNAR
                     LAELAKNFPSGVVYDVPFNTTRFVNASIGEVYKTLLEAAVLVLIVILVFLQDWRAMLV
                     PATTVPVTIIGAFAAMAALGFTVNLSTLFAIILAIGIVVDDAIVVVEGASHHIERGLT
                     PHDAAIKAMGELFGPIIGITLVLMSVFIPAAFLPGLTGQMYAQFALVIAATAIISAIN
                     AATLKPTQCALWLRAPVPLEKRNFFYRGFNRLYDPVEGGYLRLVGGMARFSGVMVLLA
                     IVLAAAGVWGVARLPTAFIPIEDQGYFVVAVQLPDGAALGRTQHALDEVSKAALAAPG
                     VDHTVAISGISALDNNASLQNAGAVYVVLKDWSQRGKGTGADLRSLYFTLQSELNKLP
                     DATCLVLIPPPIQGIGNASGFTMQVELRDGSFDYTKLERLSHTIIAAGSTQSALQHLG
                     SSFRSSVPQVELVVDRVKAETLNVAVGDIFNVLSGYVGSSFVNQFNKFGRTFQVYVQA
                     DSKYRLRPKDIENLYVRSQNGNMVPLGTLVTLHDMVGPSLIGLYNLYPTASIVGGAGE
                     GFSSGEAIDVMQEIADRTLPPGTGYEWTAMSYQEKQVGNQIVYVFGFALLLVYLCLAG
                     QYESWIAPLSVILAVPLSLIGPAIALTGLGVANNLYTQIGLVLLIALSAKNAILIVEV
                     ARERRMTEGEPILTAAVDAARTRFRPIIMTSFAFILGVAPLLVATGAGASARASLGLS
                     VVTGMLASTGLAVLFVPSFFVIMQRFEEWWKARGSAATQAHPVP"
BASE COUNT          771 a         1114 c         1075 g          629 t
ORIGIN      
        1 gggctatctt atttcgtgct cgacatgaag caacccggtg tgacagtgca cccgctgaag
       61 caaatgaatg gccacgcctc gttcaatcag gtgttcatca cggacgccgt ggtgccaccg
      121 gacatgctgg ttggtgaggt cgggcaagga tgggccgtga ccaccaccac cctcatgcac
      181 gaacgccgcg gtgccgacgg tctccgttcc tgggctcagg gatcggacaa gccgggtcgt
      241 tgctatgaag aggaacgggc cgagatcaag acgacgatgg agccctacaa gtggtatccg
      301 cagcgtgccg ggcgcgttga tctgatcgta ccgcgtgcaa aagaaaccgg acactacgat
      361 gacccggtga tccgccagga aatcgccaaa gtgctgatta tgtccaaggc agccgaatgg
      421 accgcgcgac gggcgcgcac ggcgcaggag caaggacggc cgcaaggccc cgaaggttca
      481 ctcggaaaac tggcgtcgag ccatattgct cgcgctgcag cgcgggtgca cacgcaactg
      541 accggcgccg atgcgctgct gaccggcgat gccagcccga tgggtggcgt gatcgccgaa
      601 attctggtgt ccgtaccggc gacctcgatt gccggtggca cggatgaaat ccagcacaac
      661 atcattgccg agcgcgtact gggcatgccg agggaagcca gtgtcgatac cggcaagccg
      721 ttccgcgatg taccgcgcaa taccgttggg tgaggggacg cccgtcatcg cgacattgct
      781 tcgctacgct cgcgatgatc tgttccggca catcggcctg cctgctccac gacacagccc
      841 agaattcacc accgaccgtc ccggcctggc attgcagtta cgcggctaag ggaccgggtg
      901 tgcttgcgtg gcagcggaac ctcttgcttt ccaccattcc tcgaaccgtt gcatgatcac
      961 gaagaatgac ggcacgaaca gcactgcgag gccggtcgag gccagcattc cggtcaccac
     1021 cgacaagccc agagacgccc gggcgctggc tcccgcgccg gtcgcgacaa gcagcggtgc
     1081 cacgcccaga atgaacgcaa acgatgtcat gatgatcgga cgaaaccgtg tgcgggccgc
     1141 atcgaccgcg gcagtaagga tcggttcgcc ctcagtcata cgccgctcgc gggcaacttc
     1201 cacaatcagg atggcgtttt tcgcactcag tgcgatcaac agaacgagac cgatctgagt
     1261 gtaaagattg ttggccaccc ccagaccggt caacgcaatc gccggcccga tcagcgaaag
     1321 cggcacggcg aggatcacgc tcaacggggc aatccaactt tcgtactggc cggcgaggca
     1381 cagatacacc agcagcagcg cgaacccgaa aacataaacg atctgattgc caacctgttt
     1441 ctcctgatac gacatggcag tccattcgta tccggtacca ggtggcaagg ttcggtcggc
     1501 gatttcctgc atcacatcga tggcttcgcc ggaactgaag ccttccccgg caccgcccac
     1561 gatcgatgct gtggggtaaa ggttatacag cccaatcagc gacggcccaa ccatatcatg
     1621 cagcgtcacc aaggttccca gaggtaccat gttgccgttc tgactgcgca catacaggtt
     1681 ttcgatatcc tttggccgca gccgatattt cgagtcggcc tgcacgtaga cctgaaacgt
     1741 tcgcccgaat ttattgaact gattgacgaa actggaacca acgtagccgc tgagcacatt
     1801 gaaaatatcg ccgaccgcaa cattcagcgt ctctgccttg acacggtcca ccaccagttc
     1861 gacctgcggc acgctcgagc gaaacgatga gcccagatgc tgcaacgctg actgcgtgct
     1921 gccggcagcg ataatggtgt ggctcagtcg ctccagcttg gtataatcga aactgccatc
     1981 gcgcagttcg acctgcatgg tgaacccgct cgcgttgccg atgccctgga tcggcggagg
     2041 gatcagcacc aggcaggtgg catccggtaa tttgttcagc tcactctgca gcgtgaaata
     2101 cagcgaccgc aaatcggccc cggtgccttt accacgctga ctccagtcct tcagaacaac
     2161 gtacaccgcg ccggcatttt gcaacgacgc gttgttgtcc aaggccgaga tcccggagat
     2221 ggcgacggta tgatcaacgc ccggggcggc gagtgcggct ttgctcacct cgtcgagggc
     2281 gtgttgcgtg cgacccagag cggcgccgtc gggaagctgg acggcgacaa caaaataacc
     2341 ctgatcttcg atcgggatga aagcggtcgg cagccgcgcg acgccccaga cgcctgccgc
     2401 ggccagcaca atggccagaa ggaccatcac gccactgaaa cgcgccatgc cgccgaccag
     2461 ccgaaggtag ccaccctcaa ccggatcata caggcggttg aacccgcgat agaaaaagtt
     2521 gcgcttctcc aacgggaccg gcgcacgcag ccacagcgcg cactgggtcg gctttaaggt
     2581 cgcggcattg atcgcactga tgatggctgt ggcggcgatg accaatgcga attgcgcgta
     2641 catttgcccg gtcaggccag gcaggaaggc ggcaggaatg aacaccgaca tcagcaccag
     2701 agtgatgccg atgatcggac cgaacagctc ccccatcgct ttgatcgcgg catcgtgcgg
     2761 tgtcaggccg cgctcgatat gatgggaggc accttccacg acgacgattg cgtcatccac
     2821 cacgatgccg atcgccagga tgatggcaaa cagcgtcgaa aggttgacgg tgaaaccgag
     2881 cgccgccatg gcagcgaacg cgccgatgat ggtgaccggc acggtcgtgg caggcaccaa
     2941 catggcacgc cagtcctgca ggaagaccag gatgacgatc aggaccagaa ccgcggcctc
     3001 gagcagcgtc ttgtaaactt cgccgatcga tgcgttcacg aaccgcgtgg tgttgaaggg
     3061 tacgtcgtag accacacccg acgggaaatt ctttgccagc tcggccagcc tggcattcac
     3121 caggcccgcc acgttcagcg catttgcgtt gggaagctgg aatatcgcga taccggcgga
     3181 gggcttgccg tcgagtgcaa aggactgtgc ataagtctgc gcccccagtt cgacccgtgc
     3241 gacgtctcgg actcgggtga tctgaccgcc gttcgcgctg ttgaccttaa caatgatgtt
     3301 ggcgaactgg gctggatcgg ccagccgccc ttcgacgttc agcgtgtatt ggaacccctg
     3361 gccctccggc gccggcggcg tgccgatttg cccgccggtg acctgttggc tctgctgttg
     3421 aatggcgccg atgacgtccg ccgggaccag tccccggttg cgcaatgcgt ccgggtcgag
     3481 ccagacgcgc atcgcatatt gacccacgcc aaagatgacg acattgccga caccgggcac
     3541 gcgagccagt tcatccgcca tgctgatcgc ggcgtaattg ctcaaatac
//
LOCUS       DATAVD010000101         5964 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2615071, whole genome shotgun sequence.
ACCESSION   DATAVD010000101 DATAVD010000000
VERSION     DATAVD010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5964)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5964)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5964
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2615071"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            451..1320
                     /locus_tag="VHX39_01770"
     CDS             451..1320
                     /locus_tag="VHX39_01770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989878.1"
                     /translation="MIDEQSADGFQSSVTVNELRRWSLLAAGIAYWANVVRSDEHAST
                     FSILSAANSFLSDGAFNIVAWILIATWAWRGIVSAGPATVRQVVATLALGLLSAVPTR
                     QTTIVGLSILGIILAMSARTRYGRPIAALTIGLALEMVWTSTYMLPVHHAVAIVDAET
                     SGTILRLFGQAGYGQNNLLINDSTDFRIEILAACASSFPIAGVSMAFLVVMLQWGRFP
                     RFRDWPWMTSSLLASVALTEIRLSVMSLGYGYYHWLHDGDGATVYVLSATILAVLFPI
                     LAIRSTLRTEALA"
     gene            1317..1790
                     /locus_tag="VHX39_01775"
     CDS             1317..1790
                     /locus_tag="VHX39_01775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989879.1"
                     /translation="MKLLFRNIFVMVLILSVAAQAERRSRGAPPETGSNSFTGLAGLR
                     GRLVSIQSDRRTIAVVAGCPEPVILLEVGFDGSDDALLAKVQMMGATQRYIYLGFVGE
                     KPNLMSIAGRWVAASALRVMGLRSGKTPDAMVVAELPIACPELTALDWSVLSPWT"
     gene            complement(1882..3096)
                     /locus_tag="VHX39_01780"
     CDS             complement(1882..3096)
                     /locus_tag="VHX39_01780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989880.1"
                     /translation="MDQHDHDSARHLGNTVLLSGSSRPSPAEPFPGEAAPLVRYGLAG
                     LRRCWMPEHGRWSHKYHLDGRTPPNESVPHSDLYYSINVLLGLAPVRRALAGEPYDLP
                     VLFKTICSELPKHPVRNGAWGMALWAAAELNLDTPGLAAEHLRPLAKDPTPVLGWTAQ
                     DVGLSLSGAAAQARRDASWRPVARALSEVMLRHFRGPGALFRDSGRGPRRHFATFATQ
                     VYAALSLYQYGELTNDATAIAAANACARTLIKLQGPLGEWPWFYLPRGDRVLDPYEVY
                     SVHQHGMAPAVMHHAVAHDVPGARAAIETGFRWIFGDNEMGISMLRPDLQLIYRSQRR
                     AGIQGRREARLMRAAIAAATGNPGWPSMKVPLELTQEMRSYEFGWLLWSFGGRTDYPA
                     FTNHAKFSTAAT"
     gene            complement(3228..4661)
                     /locus_tag="VHX39_01785"
     CDS             complement(3228..4661)
                     /locus_tag="VHX39_01785"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEX3989881.1"
                     /translation="MSLKRNAGRLAAASISPVCVYAMRFLRTMILSHLLSPNDLGVAV
                     ALISILVSCEMVTDMALDRFVIVTDVGNRAQTVAAAQQISVSRATMLAIAIALFSPLL
                     ARMFGVGEHAGAVACLGFISFINGLRNWRMVQIQQDYRYGPEAIASICEPIAGICVII
                     AAYSWFHDERIVLASLATEAVVYVTLSHVLVRRERVAMVDPAIRKAAFAYGLPLMVNG
                     IGLLVLKQFDQVIVVNLFGLQTLALYALGLNLAIAPASLLQSIAQKIGLPFMGRLRNQ
                     PEALAQAALLVLLGTIWAAAAYAVPVGVVLGKLVPMFYGSAYHVSATFCALVMLAVFL
                     RFARGGPNMILLQHGLTSRLTIGNLVSGFGMVIGLVLGILSRRLDGVMVGIAIGDLLS
                     LFVLLLLLRHVLALRAALVQTGVLTVVVGSVAAGWAAGDDLAQGTRELILLIGGLALI
                     CGIALAVRQAGRWFPLPSSIRRLAVRA"
     gene            5063..5677
                     /locus_tag="VHX39_01790"
     CDS             5063..5677
                     /locus_tag="VHX39_01790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989882.1"
                     /translation="MSFHSSVKVWMATAFCAALVLAALVIMRLGPGERGTDVALQLTA
                     RWSFLLFWPAYSGGALATLFGLDQLKRRARDFGLAFASAHLVHIGLVAWLCRIGAAPP
                     IGSFVFFGIALIWTYLLALLSIDRLRQALGRRFWWLLNIVGLNYIALAFASDFLGFPV
                     QGDAKYLIGYMPFVALSIAGPALRGAAFVKRTHRSWRSAASSVG"
BASE COUNT         1194 a         1789 c         1792 g         1189 t
ORIGIN      
        1 aaacttcgag accattgcgg tcatcgaggg gttgatgacg cggctcacac ctgccctgca
       61 ggtttaacgc ggtgcggcgg acgaacccgc acgggatcgt ccgccagacc gccgtccaag
      121 aaacggaatt agcctccgct cttccgccgc cggaccaaac ggccaatata gaccgcaccg
      181 cctacgaggg cgaatgccgg caggcctgcc gcgagcaggg gggccggtgc cctcggcggt
      241 ggcgacagtg tcggtgccgg cggtggcgga gccggcgttg ccggtgttgg gccaggtggc
      301 gctggttggg caacagcaga gatcgcaagc gatacacata acattgctgc aatcgccagt
      361 ggtgagagta tcttcgtcac aactttaatc tccattacta tgacccattt tggctatgat
      421 accatatcga gtcaagtgta tgatcgtatc atgatcgatg aacaatcggc tgacggcttc
      481 cagtcctccg ttacggtgaa cgagttgcgc cggtggagcc tgctggccgc aggcatcgcg
      541 tactgggcga atgttgttcg cagcgatgaa catgcaagca cattcagcat tctttccgcc
      601 gcaaacagct tcctcagtga tggtgccttc aacatcgtgg cctggattct gatcgcaacc
      661 tgggcctggc gtggaatcgt atctgccggt ccagcgaccg tccgacaggt tgtcgcaacg
      721 cttgctctcg gtttgttgtc tgccgtgcca actcggcaaa caacgattgt cggtctgagc
      781 attctcggca tcatcctcgc gatgtcggca cgcacgcgat acggacggcc gatcgcggca
      841 ctgaccatcg gcctggccct cgaaatggtc tggacatcga cctatatgct gcctgtgcat
      901 cacgcagttg cgatcgttga tgccgagacc agcggcacca ttcttcggct cttcgggcag
      961 gccggatatg gacagaacaa ccttctgatc aacgattcga cggacttcag gattgaaatt
     1021 cttgccgcct gcgcctcgtc attcccgatc gccggtgtct cgatggcatt cctggtcgtc
     1081 atgctccagt ggggtcgttt cccacggttc agggattggc cgtggatgac ctcgagtttg
     1141 ctcgcaagtg tcgcgctgac cgagattcga ctgtcggtca tgagtctcgg ttacggatat
     1201 taccactggc tgcacgatgg agatggcgca acggtttatg tgctcagcgc gaccatcctg
     1261 gccgtccttt tcccgatact cgcgattcgc tcgactcttc gcaccgaggc gctggcatga
     1321 aactgctgtt tcgtaacata ttcgtgatgg tgctgatcct cagcgttgcg gctcaggcgg
     1381 agcgcaggtc acgcggagcg ccccccgaga cagggagcaa ttcgttcacg ggcctggccg
     1441 ggctgcgggg acgcctcgtc tcaatccagt ctgacaggag aacgattgcc gtggttgccg
     1501 gttgtccgga accggtgatc cttctggagg tcggtttcga tggttcggat gatgccctgt
     1561 tggcgaaagt tcagatgatg ggcgccacac aacgctacat ctatctgggt tttgtcggcg
     1621 agaagccgaa cctgatgtcg atcgccggcc gctgggtcgc ggcctctgca ctccgggtca
     1681 tggggctgcg ttccgggaag acgccggatg ccatggtggt tgccgagctg ccgattgcgt
     1741 gccccgaact gacggcgctc gactggtcgg ttctgtcgcc atggacctga accggtcagt
     1801 actgcgctgg tatgacgtgg ttcatacgac cggacaacac gctggaccgc ttccactttg
     1861 cacagtcggg gtgaaggcgg tctaggttgc agcggttgaa aacttcgcgt ggttggtgaa
     1921 cgccggatag tcggtccgtc cgccgaagga ccagagcagc cagccaaact catagctccg
     1981 catttcctgg gtcaattcca gtggcacctt catcgaaggc catccgggat tgcctgtggc
     2041 ggcagcgatg gcggcgcgca tcagccgagc ctcgcgacgg ccttggatcc ccgcgcgccg
     2101 ttgcgagcgg tagatcagtt gcagatcggg ccgcagcatg gagatgccca tttcattgtc
     2161 gccaaagatc caacggaatc ctgtttcgat cgccgcccga gctcccggca catcatgggc
     2221 aacggcatgg tgcatgaccg ccggtgccat cccgtgctga tgcacagagt agacttcgta
     2281 cggatccagc actcggtcgc cgcgcggcag atagaaccag ggccattcgc caagcggccc
     2341 ctgcaacttg atcaacgtcc tggcgcaggc attcgcggca gcgatcgcgg tggcgtcgtt
     2401 cgtcagttcg ccgtactggt aaagtgacag cgccgcatag acctgcgttg cgaaagtggc
     2461 gaagtgccgg cgcgggccac ggccgctgtc gcggaacaat gcgcccggac cacggaagtg
     2521 ccgcagcatg acttcggata aagcgcgagc gaccggacgc cacgacgcat cacgccgagc
     2581 ctgagccgcg gcgcccgaca gggatagacc gacatcctgc gcggtccacc ccaggaccgg
     2641 cgtcggatcc ttggccagtg gacgcagatg ctccgctgcc aggcctgggg tatccagatt
     2701 gagttcggcg gcggcccaaa gggccatgcc ccaggctcca ttccgcaccg ggtgcttcgg
     2761 cagttcactg caaatggtct tgaacagcac cggcaggtca tagggctcgc cggccagggc
     2821 tcgccgaacc ggagcaagcc cgagcaacac attgattgaa taataaagat cactatgggg
     2881 aacggactcg ttgggcggtg tacgaccatc caggtggtac ttatgcgacc accggccatg
     2941 ctccggcatc cagcagcgtc tcagcccggc caggccatag cgaacaagtg gcgcggcctc
     3001 acccggaaag ggctctgcgg gtgacgggcg gctggaaccg gagagcaaga ccgtattgcc
     3061 aaggtgcctg gcgctgtcgt ggtcgtgttg gtccatcttc gtgttccgcc tgtctcgctg
     3121 gatcatgtcg gccagaccgc ttttatcctg actgtgcggc gtgaaagccg tctggcgtgt
     3181 tggctggtcg catgattcac gccctgccgg cgttccgccc agggcgatca tgctcttacc
     3241 gccagtctgc ggatggaact cggcaagggg aaccatctgc ccgcctgtcg aacggctaac
     3301 gcaattccac aaatcagcgc caacccgccg atgagcagaa tcagttcccg tgttccctgg
     3361 gcaagatcgt cgcctgccgc ccaacctgcc gcgacgctac ccacgaccac ggtcaacacg
     3421 ccggtttgca ccaaggctgc ccgcaacgcc aggacgtgcc gcagcagcag cagcagcacg
     3481 aatagcgaaa gcagatcacc aatggcaatt cccaccatga cgccatcgag gcgccgggat
     3541 aagatcccca acacgaggcc aatcaccatg ccgaagcctg aaaccaggtt cccgatcgtc
     3601 aggcggcttg tgagcccgtg ttgcagcaaa atcatgttcg gcccgccgcg ggcgaagcgc
     3661 agaaagacag cgagcatgac cagcgcacag aacgtggctg agacgtggta cgccgaccca
     3721 taaaacatcg gcactagctt ccccaggaca acaccgaccg gaacagcata ggcagccgcg
     3781 gcccagatcg tcccaagcag gaccaggagt gctgcctggg ccagcgcttc cggctggttg
     3841 cgcaggcgcc ccatgaacgg caggccgatc ttttgggcaa tgctctgcag cagcgaggca
     3901 ggagcaatcg caagattcaa tcccagcgca taaagcgcga gggtttgcaa gccgaacagg
     3961 ttgaccacga tgacctggtc gaattgcttc aagaccagaa ggccgatccc attcaccatc
     4021 aatggaagcc cgtaggcgaa ggccgctttg cgaattgccg gatccaccat ggccacacgt
     4081 tcccggcgga ccaggacatg ggaaagggtc acgtaaacca ccgcctcggt ggccaagctt
     4141 gccagtacga tgcgttcgtc gtgaaaccag ctatatgctg ctatgattac acatatgcct
     4201 gcaatcggtt cgcagatgct ggcgatggct tccgggccgt acctgtaatc ctgctgaatc
     4261 tggaccatcc gccagtttcg gaggccgttg ataaacgaaa tgaatccaag acaggcaaca
     4321 gcccccgcgt gttcgccgac accaaacata cgggcgagca aaggggaaaa caatgcgatg
     4381 gcaatggcca gcatggtcgc ccggctaaca gagatctgct gggctgcggc gacggtctgc
     4441 gctcggttgc cgacatccgt gacaatgacg aaccggtcca gcgccatgtc agtgaccatc
     4501 tcgcagctaa ccagaatgga tatgagtgcg accgccaccc ccagatcgtt cggggacaac
     4561 aggtgcgaca gaatcatggt acgcaggaac cgcatggcgt agacgcaaac cggcgatatc
     4621 gacgcggccg ccagtcggcc ggcattacgc ttcaacgaca tgatttaaat tccatcagct
     4681 cagtgggccg ggtcgcatgg atgtcttttc accggccgtg aaagtgagtg acaaagagac
     4741 gactgcatcc catagttgca gtttgtccag attcttcagc tacggccgag cgagatcgaa
     4801 tcgcggtaga tagggtgcag cgcatgctga actgctttgt ccaggcagtc agcctctcgt
     4861 gtatcgagat ccgaacggtt ctgtcaatcc aagaattaat gttacgccat tggacaacca
     4921 ggacagggtg gtgaaagaag gtgctaccgt cgtgcggatc cgtccggaag gagatgagtg
     4981 aacggatgga gcccgtgcgc agccttcgaa aacactgcta tcaataccaa gcgacgtagc
     5041 cgggatcgca atgcgcgcca acatgtcatt ccacagcagc gtcaaggtct ggatggccac
     5101 tgccttctgc gcggccctgg tcctggctgc ccttgtcatc atgcgcctcg gcccgggcga
     5161 gcggggaacc gacgttgcct tgcaactgac ggcccgctgg tccttcctgc tgttctggcc
     5221 tgcctatagt ggaggcgccc tcgccacgct gttcggactg gatcagttga agcgaagggc
     5281 ccgcgacttt ggtctggcat ttgcgtcggc ccacctggtg catatcggac tggtcgcctg
     5341 gttatgtcgg atcggggctg cgccgccgat cggctccttc gtgtttttcg gcattgctct
     5401 catatggacc tacctgctcg cattgctctc gatcgatcgg ttgcggcagg ccttggggcg
     5461 caggttctgg tggttgctga acattgtcgg tctcaactat atcgcgctgg cattcgcgtc
     5521 cgactttctg ggttttcccg ttcaaggcga cgccaagtat ctgatcggct atatgccgtt
     5581 cgttgccctg tcaatcgcag gccctgcgct gcgcggtgcc gcgtttgtca agcggacaca
     5641 ccggagttgg cgaagcgccg catcatcggt aggttgagcc acgatggtcc gcaaccgttg
     5701 cgagcataac tgtcacgttg cacaagtaca ttcccgactt tcctatgatg gcatgaatat
     5761 ccttataaca tattcgtgat gtatttgctg ttgtttgatc ggaacgtgat tgctacgatg
     5821 tttcagtgat gcatgcatcg tcacaccggc gccggcagaa agacagcacc aaagcacctc
     5881 gcaggtacgc cggtgcctgc cgcagatcca atgcaccgtt cagccgatca ccattgggca
     5941 atatctgatg cgttttaccc agct
//
LOCUS       DATAVD010000102         3086 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3173555, whole genome shotgun sequence.
ACCESSION   DATAVD010000102 DATAVD010000000
VERSION     DATAVD010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3086
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3173555"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..779)
                     /locus_tag="VHX39_01795"
     CDS             complement(3..779)
                     /locus_tag="VHX39_01795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989883.1"
                     /translation="MLFWLESQPVAVIVIVGYALCFSIAAVTYMVGRLLARTRFAEDL
                     SFITPSLLTPLGVILGLLLVFLSSRVWTNVDRATAAATQEATAVQELSRAADELPPTV
                     ADPIRNGARAYLEWVRQEDWPGMMSGNASLRSRLPGLADATKALADYNATISGQRDVQ
                     QEALAAVEKVRDARRARILQSRSFIGPGQWLVVVALFIHVLLSIATIHTRRRVSMAIA
                     LSMFSSAFAVCFVLLLVYDRPFRSGGLTVGPVEIETPLVQ"
     gene            complement(858..1238)
                     /locus_tag="VHX39_01800"
     CDS             complement(858..1238)
                     /locus_tag="VHX39_01800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007283917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3989884.1"
                     /translation="MATEIKPIRTEADHEAALAEVERLWGARSGTAEGDRLDVLATLI
                     AAYEDRNFPFATPDPIEAIRFRMEQQGLTRKDLETIIGTRTRIAEVLSRKRGLSITMI
                     RRLHDKLGIPAEVLIQPSRKGQAA"
     gene            complement(1228..1551)
                     /locus_tag="VHX39_01805"
     CDS             complement(1228..1551)
                     /locus_tag="VHX39_01805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007283918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HigB family
                     toxin"
                     /protein_id="HEX3989885.1"
                     /translation="MRIIARRTLKRFVDEREGHRDQPALKAALDAWFSEVNKAGWSSP
                     ADVKHSYATASIVTAEPIVFNIKGNSYRLVGAVDFEKGIVFIKWIGTHAAYDRIDVRT
                     VRHGD"
     gene            1687..>3086
                     /gene="hpaB"
                     /locus_tag="VHX39_01810"
     CDS             1687..>3086
                     /gene="hpaB"
                     /locus_tag="VHX39_01810"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     oxygenase component"
                     /protein_id="HEX3989886.1"
                     /translation="MPARTGKQYLAGLREQPREVWFRGERVKDVTTQPGLARGAQAIA
                     ALYDQQSDPKYRAEMTFTSPKTGDPLGLSFIIPRTKEDLENRRVMMLNWARSTCGMMG
                     RSPDFMNVHFAAWAGAADYFAQGKPEYGENMRRYYDHIAENDLVLTHSLLNLQRSRLV
                     SGMFNLEEGTALQAVKETSAGVVVRGARVLATLGPFADEIAVYSPRLGRHSEAHSPFA
                     LNFAIPCSTPGLKFQCRDSFDYGQSHFDHPLGSRFEEMDCVVFFDDVVVPWERIFIYG
                     DVERLNEAPNITSTSSHTAHQGAAKNLAKCELVLGVALLLSETLGTAQLPHTQERIGE
                     LMMYTELMRACMRAGEADAKLNEWGVMTPASLPVETTRNLFMTAYPRMAEILQLMSSS
                     SMMILPMEVDFKTPMAPFIEQYLATEGSSARDRVKLFHLVWDIACSSFGQRQVHYERF
                     FASDPLTRARALASTYP"
BASE COUNT          611 a          987 c          881 g          607 t
ORIGIN      
        1 attcattgca ccagcggtgt ttcgatttcg acgggaccga cggtcaatcc gccggaacga
       61 aatggcctgt cgtacaccag aagcaaaacg aagcagacgg cgaacgccga agagaacatc
      121 gaaagtgcga tcgccatgga cacgcgccgc ctggtgtgaa tggtcgcgat cgacagcagc
      181 acatggataa acagcgccac cacgaccaac cactggccag gcccgataaa ggatcgactt
      241 tgcaggatac gagcccggcg tgcgtctctc accttctcaa cagccgccag cgcctcctgc
      301 tgcacatccc gttgccctga aatggtggcg ttataatcgg caagcgcttt cgttgcatca
      361 gccagacccg gcaatctcga tctgagcgat gcattgcctg acatcattcc gggccaatct
      421 tcttgccgca cccattcgag atacgcgcgc gcgccattgc ggatcggatc cgccaccgtg
      481 ggcggcagtt cgtccgcggc tcggctgagt tcctggaccg cggtcgcctc ctgcgtggcc
      541 gcggcggtgg cgcggtcgac gttggtccag accctggaag agagaaacac cagcagcagg
      601 ccaaggatca caccaagtgg cgtgagaaga ctgggggtta taaagctaag atcttcggca
      661 aaccgcgtcc gcgccaatag cctgccgacc atgtaggtca ctgcggctat cgagaaacac
      721 agcgcgtagc cgacgataac gatcaccgcc acaggctgcg attccagcca aaagagcatt
      781 cggtcgtttc ccttccccgg tcattcagtg cacctcaatg atgaggtgag aggtggcgca
      841 acgatagcaa cggtcgctta tgccgcctgc ccctttcgcg acggctggat caacacttcg
      901 gccggaatgc ccagtttgtc gtgcagccgg cgaatcatgg tgatggacaa tcctcgcttt
      961 cgcgagagca cctccgcgat ccgtgtgcgc gtgccaatga ttgtttcgag gtccttccgt
     1021 gtcaaacctt gctgctccat tcggaagcgg atggcttcaa tcggatccgg cgtagcaaat
     1081 ggaaagttcc gatcctcata cgccgcgatc agcgtcgcga gcacgtcgag ccgatcgcct
     1141 tccgccgtgc cagaccgcgc tccccacaac cgctccacct cagcaagagc tgcctcatgg
     1201 tccgcctctg tgcgaatggg tttgatttca gtcgccatgc cgtactgtcc tgacatcgat
     1261 ccgatcatag gctgcgtggg tgccaatcca tttgataaag acgatcccct tttcgaaatc
     1321 cacggccccc accaaccggt agctgttgcc cttgatatta aagacgatcg gctcggccgt
     1381 tacgatactg gccgtcgcat agctgtgctt cacgtcagcc gggctgctcc acccggcttt
     1441 gttgacctca ctgaaccagg cgtcgagtgc cgctttgagc gcgggctggt ccctgtgtcc
     1501 ctcgcgctca tcgacaaacc gtttcaacgt gcggcgggcg atgatccgca tgacgttacc
     1561 atatcacgcg cccattttgg gcacaacccg attggtctgg gccgcgtgcc gtcaccctcc
     1621 gttacacccc ggttgaccgt gtgattggcc aggtgaacac tcgacgtgga ttaagggagc
     1681 acgcccatgc ctgcccgcac aggaaagcaa tacctcgccg gccttcgcga acaaccccgc
     1741 gaggtctggt tccgcggtga gcgcgtgaag gacgtcacca cccaacctgg cctcgcccga
     1801 ggcgcccagg cgatcgcggc actgtacgac cagcaaagcg acccgaagta ccgggccgaa
     1861 atgaccttca cctcgccgaa gaccggtgac ccgcttggcc tgtccttcat catccctcgt
     1921 accaaagagg acctggaaaa ccgccgtgtc atgatgctca actgggctcg ttccacgtgc
     1981 ggcatgatgg gccgttcgcc cgacttcatg aacgtccact tcgccgcctg ggccggagcc
     2041 gccgattatt tcgcccaggg caagccggag tacggcgaga acatgcggcg gtactacgat
     2101 catatcgccg agaacgatct cgtgctgacc cattccctgc tcaacctgca aagaagccgc
     2161 ctcgtctccg gtatgttcaa cctggaggaa ggcaccgcat tgcaggcggt gaaggagacg
     2221 tctgccggag ttgtcgtcag aggtgcccgc gtgctggcca cacttggccc gttcgccgat
     2281 gaaattgcgg tctattcccc acgccttggc cgccatagcg aagcccacag cccgtttgcg
     2341 ctgaacttcg ccattccgtg cagcacgccc ggcctgaaat tccagtgccg tgacagtttc
     2401 gattatggac agtcgcattt tgaccaccct ctgggctcgc gcttcgagga aatggattgc
     2461 gtcgtgttct tcgacgacgt ggtggtgccc tgggagcgca tttttatcta tggcgatgtc
     2521 gagcggttga atgaagcgcc taacatcacc tccacctcgt cgcacaccgc acaccagggc
     2581 gccgcgaaga acctcgcgaa atgcgaactg gttcttggcg tcgcgctgtt gctgagcgaa
     2641 acgctcggca ccgctcagtt gccccatacg caggaacgca tcggcgagct gatgatgtac
     2701 accgaactga tgcgcgcctg catgcgggcc ggtgaggcgg acgccaaact caacgaatgg
     2761 ggcgtgatga cgccggcctc gctgccggtc gagaccaccc gcaacctgtt catgaccgcc
     2821 tatccgcgga tggcagagat cctgcagctg atgagttcgt ccagcatgat gatcctgccg
     2881 atggaggtgg acttcaaaac cccgatggcg ccgttcatcg agcagtatct cgcgaccgag
     2941 ggcagcagcg cgcgcgaccg ggtgaagctg ttccatttgg tgtgggacat tgcctgctcg
     3001 tcgtttgggc agcgccaggt gcactatgaa cgtttcttcg ccagtgaccc gttgacccgg
     3061 gcgcgcgctt tggcgtctac ttatcc
//
LOCUS       DATAVD010000103         3147 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3360401, whole genome shotgun sequence.
ACCESSION   DATAVD010000103 DATAVD010000000
VERSION     DATAVD010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3147
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3360401"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..942
                     /locus_tag="VHX39_01815"
     CDS             <1..942
                     /locus_tag="VHX39_01815"
                     /inference="COORDINATES: protein motif:HMM:TIGR03483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989887.1"
                     /translation="DANIIVGATFDETLDGVIRVSVVATGIEQAAISRNVGGPAAPVT
                     NAVATASSPDNRLADLTARLRADNARLAERAQKLETGLPPQAPPMVQASGPVQQRPTA
                     NVERAALAAIAAAVAPEVPLQPVASAPLQPASYGDVTVRPIAQKPTLFPDHETPKVEV
                     REIATPETFIPQAAERAPNRAPRMPKFEDLPMPAQAEIRQARGEAEEEHPQKTRMSLL
                     QRLANVGLGRRDEETEPPIAARASGPAMAPMPPLPERKPQRTVAQQMGTPEPVSEYAR
                     RPAPQGLDTHGRPAPVAPAPQGDDHLDIPAFLRRQSS"
     gene            1296..2255
                     /gene="lpxC"
                     /locus_tag="VHX39_01820"
     CDS             1296..2255
                     /gene="lpxC"
                     /locus_tag="VHX39_01820"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: protein motif:HMM:TIGR00325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEX3989888.1"
                     /translation="MKFSRQTTLRSQATVTGVGVHSGLPVNLTIGPAPIDAGFIFVRT
                     GTDGPDREVQAVAESVIATEFATVLGDRDGPLVSTSEHVLAALRGMGVDNATIEVDGP
                     EVPIMDGSAAAFVAAIDQAGIVTQSAARRFIQVLKPVQVAIGDSFGELRPHAGGFRAE
                     VEIDFANPVIGQQSYVLDLSPERFRREVSRARTFGCMNDVAGLWSAGFARGASFENTV
                     VFDEERLLNTEGLRYADECARHKVLDVVGDLALAGLPLLGAYRSVRGGHKVNHAVLKA
                     LLADRTAWRVLESDAVRRPRGYAEAGSGMVGGMVAPAYGPDVS"
     gene            2591..>3147
                     /gene="bamD"
                     /locus_tag="VHX39_01825"
     CDS             2591..>3147
                     /gene="bamD"
                     /locus_tag="VHX39_01825"
                     /inference="COORDINATES: protein motif:HMM:TIGR03302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEX3989889.1"
                     /translation="MTLKLRTLSARLDPHWLGRQLRLAASLAVLAVPLSGCGTGALWD
                     KFFAKDDTFVEEPADKLYNEGLYLMNQKSDPKAASKKFEEVDRQHPYSEWARKSLLMS
                     AYAYYNAGDFDNCIGSATRYVTLHPGSPDAAYAQFLIASSQYDQIPDTSRDQARTEKA
                     IAALEEVIRKYPTSEYAVSAKAKLEG"
BASE COUNT          563 a         1005 c          991 g          588 t
ORIGIN      
        1 gacgccaaca tcatcgtcgg cgccacgttc gacgaaacgc tcgacggcgt catccgcgtt
       61 tcggttgtcg ccaccggtat cgagcaggcc gcgatttcgc gcaacgtggg cggccccgcc
      121 gctcccgtga ccaacgcggt cgcaacggcc tcctcgccgg ataaccggct ggccgacctg
      181 accgcgcgtc tgcgcgcgga caatgcgcgg ctcgccgagc gcgcccagaa gcttgagacc
      241 ggcttgccgc cgcaagcgcc tcccatggtt caggcgtccg gaccggtgca gcagcgcccg
      301 accgccaacg ttgaacgtgc cgcactcgcc gcgatcgcgg ccgcagttgc ccccgaagtg
      361 ccgctacagc cggttgcctc ggcaccgttg cagcccgcgt cttatggcga tgtgacggtg
      421 cgcccgatcg cgcagaagcc gacgctgttc ccggatcacg agaccccgaa agtcgaggtt
      481 cgcgagattg cgacccccga gaccttcatc ccgcaggccg ctgaacgggc gccgaaccgc
      541 gcgccgcgga tgccgaagtt cgaggatctg ccgatgccgg cgcaggccga aatccggcag
      601 gcgaggggag aggccgagga agagcatccg cagaagaccc ggatgtcgct gctgcagcgt
      661 ctggccaatg tcggccttgg ccgccgcgac gaagagaccg agcccccgat tgcggcccgc
      721 gcctccggtc ccgcgatggc cccgatgccg ccgctgccgg agcgcaagcc gcagcgaacg
      781 gttgcacagc aaatgggaac tccagagccg gtatcagagt atgcccgccg gcccgcgccg
      841 cagggattgg acacccatgg acgtccggca cctgttgcgc cggcaccaca gggcgatgat
      901 catctggata tccccgcctt cctgcggcgg cagagcagct gaaaattgtt acaattccga
      961 ccccaacaga ggccccggcg aatcagccgg ggcctttttc tttgccgccg tggcaagcct
     1021 tcggatcatc cagccaagca gctgatattc aatgattaat tattcatttg ggggtgcaat
     1081 ggtgaggccg cagccggccg aaaaccggcc ccgaatttgg ttaagctttg gcgcgaatgc
     1141 ggcagaggtt gggtaacaat cggtaaaaaa ccgtgagttg gcgctcttta gggcaatgac
     1201 tatggtctgc cgtgacttgg ggatactgaa gccgaatcgg cacgcgcaat tgggccgttc
     1261 agctttcaag taaagtcggt agtgggcggt ttggaatgaa atttagccgg cagacaacgc
     1321 ttcggtcgca agccaccgtg acgggcgtcg gcgttcattc cggtttaccg gtcaatctga
     1381 ctattggacc tgcaccgatc gatgcaggtt ttatttttgt ccgcaccgga accgatggcc
     1441 ccgaccgcga agtacaggcg gttgccgaat ccgttatcgc aaccgaattc gccaccgtgc
     1501 tcggcgaccg cgatggtcct ttggtctcga cctctgaaca cgtgctcgcg gcgttgcgcg
     1561 gcatgggcgt cgacaacgcc accatcgaag tcgacggccc ggaagtcccg atcatggacg
     1621 gtagcgcggc cgccttcgta gctgcgatcg atcaggccgg cattgtcact caatccgcgg
     1681 cgcgccgctt cattcaggtg ctcaagccgg tacaggtggc gatcggtgat tccttcggcg
     1741 agttgcgccc ccacgcgggc ggtttccgcg ccgaggtcga aatcgatttc gccaatccgg
     1801 tgatcggcca acagagctat gtgctcgatc tcagccccga acggttccgt cgcgaggttt
     1861 cccgcgcccg caccttcggc tgcatgaacg atgtcgcagg tctctggagt gcgggcttcg
     1921 ctcgtggcgc ctcgttcgag aatacggtgg tgttcgacga ggagcggctg ctcaacaccg
     1981 aaggactgcg ctacgctgac gaatgcgccc ggcacaaggt gctcgacgtg gtcggtgatc
     2041 tcgcgctggc cggtctgcct ctactcggcg cctatcgttc ggtccgtggc ggtcacaagg
     2101 tcaatcacgc ggtgctgaag gccttgttgg ctgaccgtac cgcttggcgt gtactggaat
     2161 cggacgcggt tcgtcgcccg cgcggctacg ccgaagccgg cagcggcatg gtgggcggga
     2221 tggttgcccc ggcctatggc ccggacgttt cctgagcgct ctgctgggtg ttttctgacc
     2281 gtttcccggg ctttcctgaa catccgacgg gcgcttcaca atgccgcgta gcgaaagcta
     2341 ttttcggccg atcccggacc cggtagccac acgggctgca atgcgttgcg gccgccttaa
     2401 tccgggcgaa atggctgcgt atccgattgg ttaccgaacc tttttcggct acacaggctc
     2461 gcggttgcag ggcagtgcac tgcgggctcg gcatcaatgc gttcatgaag tgcggctata
     2521 agggcattca tggcgcgcgg cgggcaccgc atcacaggcg tcaggtttta attctatgtc
     2581 ggcacggcgt atgacgctca agttacgcac attgtccgct cgtttggacc cccattggct
     2641 ggggcggcag ctgcgtttgg cggccagcct ggccgttctc gcggtcccct tgagcggatg
     2701 cggaaccggc gcgctatggg acaaattctt cgccaaggac gacaccttcg tcgaagagcc
     2761 cgcggacaag ctctacaacg agggcttgta cctcatgaat cagaagagcg atccgaaggc
     2821 ggcctcgaag aagttcgagg aagtcgatcg ccagcatccg tattccgagt gggcgcgcaa
     2881 gtcgctcttg atgtcggcct acgcctatta caatgccggc gacttcgaca attgcatcgg
     2941 ctctgcgacc cgttacgtca ccttgcatcc gggcagcccc gatgccgcct acgcgcagtt
     3001 cctgatcgcg tcttcgcaat atgaccagat ccccgatacg tcgcgcgacc aggcccgcac
     3061 cgagaaggcg atcgccgcgc tcgaagaggt gatccgcaaa tatccgactt cggaatacgc
     3121 cgtcagcgcc aaggccaagc tcgaggg
//
LOCUS       DATAVD010000104         3069 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_9943, whole genome shotgun sequence.
ACCESSION   DATAVD010000104 DATAVD010000000
VERSION     DATAVD010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3069
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9943"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1415)
                     /locus_tag="VHX39_01830"
     CDS             complement(<1..1415)
                     /locus_tag="VHX39_01830"
                     /inference="COORDINATES: protein motif:HMM:NF017183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative Ig domain-containing protein"
                     /protein_id="HEX3989890.1"
                     /translation="MKRVLAVLAALALLGVPALAHRGHGGIGAGGGGALTITAPGGGT
                     TLTSVVNGQPFAAQLNVAGGDGHYALAITSGPSTYNNGLMFLPGGLLTGVANLVPPNV
                     AENDTFTVQAWDNSGHTGSQTFTLAVSTASGSIGISTGATLPAGSVGASYFAPVQCIN
                     GVPPYYETLSGHTSNTAPTNSAQSYGITTQGQLQFAPTTSGADTFTVECQDIAGHSFT
                     STANFFSAAISNAIAFSTPINMPPGMQGAKYKYQMRGVPTSGSCCTYTVLSGAPPGLS
                     LSSAGLWTGTETGLGLYTPNIQISDGGSHSTTQIFNMAFAKNAIVSRPSYNSSSSNGL
                     FVLNGQLYDANGVPVRIRGVNRNHIDQTSSILVPSNAPFVRVFAYAPSYSAATSYSSY
                     INPQFISQGIVPIITQAVDSAGNGTSGSNVYGATSGSNAGMGTILQLWQSWYSASATY
                     MDKIIANVANEWGKDVSSNYVA"
     gene            complement(1419..2048)
                     /locus_tag="VHX39_01835"
     CDS             complement(1419..2048)
                     /locus_tag="VHX39_01835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989891.1"
                     /translation="MRRIIVALALTLLLSLAPASRSNAATEYYGLCDVATSTDCNWLT
                     GGNPYAGNTGDPLGVFASKYNLNFMWLSPLWVLPAYSFPCNSTGSTGGLGSCAVSQAT
                     LNDLLASTTFTIAATGCTPSAHAGGPFGGTITLASGPCTSIVITMNGATGFTASTGYH
                     CSVGDRTAMAAGSWIPSWTESASSTTTATLPIPGEAGATDVISFTCDWY"
     gene            complement(2068..2463)
                     /locus_tag="VHX39_01840"
     CDS             complement(2068..2463)
                     /locus_tag="VHX39_01840"
                     /inference="COORDINATES: protein motif:HMM:NF018755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1353 domain-containing protein"
                     /protein_id="HEX3989892.1"
                     /translation="MFQTRLYVRDMPTQDMWVVVRPFVWTDSEFGTIEVPVGMMTDLA
                     SIPRALRNVPELDPDGASRRAAVCHDFLYDRAAGRAHGKDFADRFLHAAMLADGCGNI
                     AANLFYEAVKEFGRSSWDAWTLDLPLLDP"
     gene            complement(2466..>3069)
                     /locus_tag="VHX39_01845"
     CDS             complement(2466..>3069)
                     /locus_tag="VHX39_01845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989893.1"
                     /translation="PMVTGCATVGNWFATAPAAPVVVTISVDVAVAAAEQNGVKASDI
                     NRIAQIALAADQGTTATLAAVSAAVNAEITKLNLPPLDLAAANALEALVSAAVQQKLA
                     GNADLASAQAAVSQVLTAVIAATGGASTTRVAPAEVPQQNKHFVLSSVESPQVVGASA
                     SLVLIACLQAFAHLNVNAPTGAAITVLFTVGAAALDNLIS"
BASE COUNT          554 a          945 c         1015 g          555 t
ORIGIN      
        1 gctacatagt tactgctgac atccttgccc cattcgttgg cgacgttggc gatgatcttg
       61 tccatatacg tcgcggaggc gctgtaccag gactgccaaa gctgcaagat cgtccccatg
      121 ccggcattac tgccgctggt ggccccatac acgttgctgc cggaggttcc gttgccggcc
      181 gaatcgaccg cttgggtgat gatcggaacg attccctgag agatgaactg cgggttgatg
      241 taactgctat agctcgttgc ggccgaatag ctcggcgcat atgcgaacac gcggacgaac
      301 ggggcgttgc ttggcaccag gatggaggaa gtctggtcga tatggtttcg gttgacgccc
      361 cggatccgca ccggtacccc atttgcatcg tacaactgtc cgttgagcac gaagaggccg
      421 ttgctcgaac tgctgttgta ggaggggcgc gagacgatcg cattcttcgc aaacgccatg
      481 ttgaagatct gcgttgtgct gtgcgagccg ccatcgctga tctggatatt cggcgtatac
      541 agcccgaggc ccgtctcggt gccggtccaa aggccggcac ttgagaggct caggccgggc
      601 ggggcacccg atagcaccgt atacgtgcag caactgcccg aggtggggac gccccgcatc
      661 tggtacttgt acttcgcccc ctgcatgcca ggcggcatgt tgatcggggt gctgaaggcg
      721 atcgcgttgc tgattgcggc ggagaagaaa ttggcggtac tggtgaagga gtgcccagca
      781 atgtcctgac actcgaccgt gaaggtgtcg gcaccggagg tagtgggcgc gaactgcagc
      841 tgcccctgcg tcgtgatgcc atagctttgg gcgctattcg tgggagccgt gttgctggtg
      901 tggccgctga gcgtttcgta gtacggagga acgccgttaa tgcactggac cggagcaaag
      961 tagctcgcgc ccaccgatcc ggccggcagc gttgcgccag tggagatccc gatggagccg
     1021 ctcgcagtcg acaccgcgag tgtgaaagtc tgggagccgg tgtggccgga gttgtcccac
     1081 gcctgaacgg taaaggtgtc gttttccgca acgtttggcg gaacgagatt cgcgacgccg
     1141 gttagcagac cgcccggcag gaacatcagc ccattgttgt acgtgctcgg gccactcgtg
     1201 atcgcgagcg cgtaatggcc atccccgcct gcgacgttca gctgcgccgc gaagggctgt
     1261 ccatttacga cggaggtaag cgtcgttcca ccgcctggcg ctgtgatcgt tagggcgccc
     1321 ccgccgcccg cgccgatgcc gccatggcct cgatgggcga gcgccggtac acccaacagc
     1381 gcaagcgccg cgaggacggc aagtacgcgc ttcatcgttt agtaccagtc gcaggtgaag
     1441 ctgatgacgt cagtcgcgcc agcttcgcca ggaatcggca gcgtcgccgt ggtggtggag
     1501 ctcgcggact ccgtccaaga aggaatccag ctgccggccg ccatcgccgt gcgatccccg
     1561 acgctgcagt gataaccggt gcttgcagta aagcccgttg cgccgttcat cgtgatcacg
     1621 atgctggtgc acgggcccga cgcgagtgtg atcgtgccgc cgaacgggcc gccggcgtgg
     1681 gcagacggcg tacagccggt tgcagcaatc gtgaacgtgg tgctcgccag aagatcgttg
     1741 agcgttgcct gcgacaccgc gcagctgccg agccctcccg tcgagcccgt cgagttgcac
     1801 gggaagctgt aggctggtag cacccacaac ggcgagagcc acatgaaatt taggttgtac
     1861 ttggaagcaa aaacgccaag cggatcgccc gtattgccgg cgtaagggtt gccgcccgtg
     1921 agccagttgc agtcggtgga cgtggccacg tcgcacagac cgtaatactc ggtcgccgca
     1981 ttcgagcgcg acgcgggcgc aagcgaaagc agcagcgtca gtgcaagggc tacgattatg
     2041 cggcgcatgt gaggaacctc gtttgaatca gggatcgagc agcggcaggt caagcgtcca
     2101 ggcatcccag gatgaccgcc cgaactcctt gaccgcctcg taaaacagat tcgccgcgat
     2161 gttgccgcac ccatcggcga gcatcgcggc atgaaggaat cgatcggcaa agtctttgcc
     2221 gtgcgcgcga cctgccgcgc ggtcgtacag gaagtcatga cacaccgcag cgcgacggct
     2281 tgccccatcc gggtcgagct ccgggacgtt gcgcagtgct cgagggatcg aggccaggtc
     2341 ggtcatcatc ccgaccggga cctcgatcgt tccgaactca ctatcggtcc agacgaacgg
     2401 gcgcacgacg acccacatat cctgagtcgg catgtcgcgc acgtagagcc tggtctgaaa
     2461 catgatcagc tgatcaggtt atcgagcgcg gccgcgccca ccgtgaagag caccgtgatc
     2521 gcagcgcccg tcggggcgtt gacgttcagg tgcgcgaagg cctgcaggca ggcgatcagc
     2581 accaggcttg ccgaggcgcc cacgacctgc ggggactcga ccgagctcag cacgaagtgc
     2641 ttgttctgct gcggcacctc ggccggtgca acgcgggtcg ttgacgcacc accagtggcc
     2701 gcgatgaccg ccgtgagcac ctgggagacg gccgcctggg cgctcgccag gtccgcattg
     2761 cctgccagct tctgctgcac ggctgccgag accagcgcct ccagcgcatt cgccgcggcc
     2821 aggtcgagcg gcggcaggtt cagtttcgtg atctccgcgt tcaccgcagc gctcaccgcg
     2881 gccagcgttg cggtcgtgcc ctggtcggcc gccagagcga tctgggcgat gcggttaatg
     2941 tcggaggcct tcaccccgtt ttgctcggcc gctgccacag cgacatccac gctgatcgtg
     3001 acaacgacgg gcgctgccgg ggcggtggcg aaccagttcc cgaccgtggc gcaccccgtg
     3061 accattgga
//
LOCUS       DATAVD010000105         1874 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_382930, whole genome shotgun sequence.
ACCESSION   DATAVD010000105 DATAVD010000000
VERSION     DATAVD010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_382930"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..687)
                     /locus_tag="VHX39_01850"
     CDS             complement(<1..687)
                     /locus_tag="VHX39_01850"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3989894.1"
                     /translation="MPYYQKGDVRIRYEEAGKGFPLLVTPGGGLNSRVSNWPTAVFNS
                     MEIFKDEFRCITMDQRNATGGESTGPIAVEDPWGAFADDQLGLMDHLGIREFFFMGYC
                     IGGCFALKLMERAPQRVVAGVLVQTVGHRDDDPDVMHRSGKDVWGPEVRARKPDVSVE
                     TIDKYLHNLYRAQPNFVYSVSKDFARTCQTPMLVLPDETPSHPHQSSVEVASLCPNAE
                     ITVFPWKEPAE"
     gene            891..1412
                     /locus_tag="VHX39_01855"
     CDS             891..1412
                     /locus_tag="VHX39_01855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989895.1"
                     /translation="MSYSSHVLTSPTIRLPYVRLPKLRWPRLSPGARAILMMGLMISP
                     AFISDYIGYGVQRLFYTAGQIAEMRPPDDNILSKVTIFPVACADPAAPAAQQRSWVEA
                     ATKVGWPTYRQAGETCFRPDRVLLGVAGLKTFNVACPTMLLSVADRQHWLQFAADHGW
                     GPYPQAGTDCADP"
     gene            1477..>1874
                     /locus_tag="VHX39_01860"
     CDS             1477..>1874
                     /locus_tag="VHX39_01860"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX3989896.1"
                     /translation="MRIGFVGTGTMGTPIAGCLIRAGHSLSVYDRRPEATRELCAQGA
                     MHAETAFAAARDSDVVLTSLPGPVEFESATLEPQTGILAGLQPGAAHIDLTTNAPKTV
                     ARVAKEYQARGVELLDAPVSGRPPTMTVMIG"
BASE COUNT          352 a          606 c          554 g          362 t
ORIGIN      
        1 ttccgccggc tccttccacg gaaacaccgt tatctcggcg ttgggacaca atgaagcgac
       61 ctcaaccgag ctctggtgcg gatgggaagg cgtttcgtcc ggcagcacaa gcatcggcgt
      121 ctggcaggtc cgcgcaaagt ccttcgacac actgtaaaca aaattgggct gcgcacgata
      181 gagattgtgc aaatatttgt cgattgtctc cacgctcacg tccggcttgc gcgcgcgcac
      241 ttccggcccc cacacatcct tgccggagcg gtgcatgacg tccggatcgt catcccggtg
      301 acccaccgtc tggaccagta cgccggccac cacgcgctgc ggcgcacgct ccatcagctt
      361 gagtgcgaaa caacccccga tgcagtagcc catgaagaag aactcgcgga tgccgagatg
      421 gtccatcagc ccaagctggt cgtcagcgaa ggcaccccat gggtcctcga ccgcgatcgg
      481 gccggtggac tcgccgccgg ttgcattgcg ctgatccatc gtgatgcagc ggaactcgtc
      541 cttgaaaatc tccatggaat tgaacactgc ggtcggccag ttgctgaccc tggagttcag
      601 gccgccaccc ggggtgacca gcaacggaaa acctttgccg gcctcctcat aacggatccg
      661 gacgtcgccc ttttgataat acggcatgtc ggtttctctc ctcgcttggt gagctttccg
      721 gtcaccgttg gcacggcgcc tttcgatccg gcagttcacc ccagattgcg gctttgctca
      781 acccgcgcac cggtgcgcca ggcgagatat ctggactcgc cggactgttt gccgctaccg
      841 tcagcgaaac agtgattgcg aggcacctgc ggaaagccga ggaggtcacg atgtcctatt
      901 ccagccacgt tctgacgagc cccacgatcc gtctgccgta cgtaaggcta ccgaaactgc
      961 gttggccacg tctgtcgcct ggcgcccgcg cgatcctgat gatgggcctg atgatcagtc
     1021 cggcgttcat ttcggattat atcgggtatg gcgtccaacg gctgttttat accgctggtc
     1081 agatcgccga gatgcgcccg cccgacgata acatcctatc gaaagtcacc attttcccgg
     1141 tcgcctgcgc tgatccggca gcaccggcag cgcaacagcg gagttgggtc gaggccgcaa
     1201 ccaaagtcgg ctggccaacc taccgccagg ccggcgagac atgctttcgg ccggatcggg
     1261 ttttgcttgg tgtcgcggga ttgaaaacct tcaacgtcgc ctgcccgaca atgcttctct
     1321 cggtggcaga tcgccaacat tggctgcaat ttgccgcgga ccatggatgg ggaccgtacc
     1381 cgcaggccgg tacggactgc gccgatccgt aacgcccctt gccgttcatg tccggccggt
     1441 cgatgctaac tcccaggcag ggagggcgat atcaaaatgc ggattggttt tgtcggtacc
     1501 ggaacgatgg gcacgccgat cgcgggctgc ctgatccgcg ccggtcactc gctgtcggtc
     1561 tatgaccgcc ggccggaggc cacacgcgag ttgtgtgcac aaggcgccat gcacgccgaa
     1621 accgccttcg ccgccgcccg cgatagcgac gtggtgttaa cgtcgctgcc tggccctgtc
     1681 gagttcgagt cagcgacgtt ggaaccgcaa accggtatcc ttgccggatt gcaaccaggt
     1741 gccgcgcata tcgacctgac cacgaatgcg ccaaagaccg tcgctcgcgt agccaaggag
     1801 taccaggcac gcggggtcga actgctcgat gcgccggtca gcggccgccc gccaacgatg
     1861 accgtaatga tcgg
//
LOCUS       DATAVD010000106         1596 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_755765, whole genome shotgun sequence.
ACCESSION   DATAVD010000106 DATAVD010000000
VERSION     DATAVD010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_755765"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..807)
                     /locus_tag="VHX39_01865"
     CDS             complement(94..807)
                     /locus_tag="VHX39_01865"
                     /inference="COORDINATES: protein motif:HMM:NF021438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2147 domain-containing protein"
                     /protein_id="HEX3989897.1"
                     /translation="MGDRIQFITRSLLSSQLSDPADSRGQAIGLFGQNVANSVSAGGY
                     DQAFIALGAALIVTLCGVSLYKVRRRATHLIDLRWRPQWLRFGAPGNHATGGFAAILA
                     ILLAAAAASAEPTGSPLGDWATANGHGVIAIAQCGNTLCGRIVGIDRKATEPMPTDVE
                     GRSQCGLTIITNEQSQPDGTWLGEITDPRDGGVYQAKLWLDAQGNLRLRGFIGIPALG
                     STQTWHRFTGHLTGACGLA"
     gene            1175..1522
                     /locus_tag="VHX39_01870"
     CDS             1175..1522
                     /locus_tag="VHX39_01870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989898.1"
                     /translation="MVVRYGLVLTLCGSIFAHGAHAEDNAGYPTATRAEFVFACMATN
                     GETQDALQRCSCAIDVVAAALPYDQYEKAETVLRMRRSAGGYLGQEFRAAPTNKIVRD
                     LEESEAEAEVRCF"
BASE COUNT          292 a          481 c          506 g          317 t
ORIGIN      
        1 acgtggcggc gaccaaagcg gggatggcga ggctcatcag gccgcgccgt tcgatggcga
       61 gtgtattgct ggtcatgatt gtccccttcg ctctcacgcg agaccgcacg caccggtcag
      121 gtgtccggtg aaccggtgcc acgtctgtgt ggacccgagt gccgggatgc cgatgaagcc
      181 ccgcagccgc agattgcctt gcgcatccag ccagagcttc gcctggtaaa ccccgccgtc
      241 acgcggatcg gtgatctcgc caagccaggt cccgtccggc tgggactgtt cgttggtgat
      301 aatggtcagg ccacattgcg agcgaccttc cacgtcggtt ggcatcggtt ccgttgcctt
      361 gcggtcgatg ccgacgatgc ggccgcatag tgtgttgccg cattgagcaa tcgcgatgac
      421 gccgtggccg ttcgccgtgg cccagtcgcc aaggggactg ccggtcggtt ccgccgaggc
      481 ggccgctgct gccagtaaga tcgcaagaat ggcggcgaaa ccgcctgtcg catggttgcc
      541 gggagccccg aacctcaacc attgaggcct ccaacggagg tcgatcaagt gggtggcacg
      601 acgcctgacc ttatacagcg agacgccgca cagggtgacg atgagcgcgg cacccagagc
      661 aataaacgcc tgatcgtagc cgcccgcgga cacactgttc gcgacgtttt gtccgaacag
      721 accgattgcc tgcccacgcg agtcggccgg gtcgctcagt tgggaggaca gcagcgatct
      781 ggtgataaat tgtatcctgt cacccacggt cagactcctt cgtcccaggt ttggcccggt
      841 atgaccggcc ggccggctgc ctccggcgtt gcccgagtac ttattagtct gggcttcaga
      901 aacaattggg cgcttgcgta aagcacctgt gcagaaatcg ctaaaatggc ggtcttgcgc
      961 tggcggcggc tcggccaggt gctccgatga ccaacttgac tgtgtgaaca cagcgggtaa
     1021 atctcgggcc ggttcagaaa gaaatggagg aatttcggat ggcctggaaa accccgaaaa
     1081 tcgtcgaact cgtccttggt gccgagatca attcttatgc ctgcgccgaa ctgagctgat
     1141 cgccgatccg atcgtttgcc cgcggatttc gctgatggtt gtcaggtatg gcctggtcct
     1201 cacgctgtgt ggctcgattt tcgcacatgg ggcgcacgcc gaggataatg ccggctaccc
     1261 caccgcgacg cgggcagaat tcgtgttcgc ctgtatggcc acgaacggcg agacgcagga
     1321 cgctttgcaa cgctgttcct gcgcgatcga cgtcgttgct gcagcgttac catacgacca
     1381 gtatgaaaag gctgagaccg tgctgcggat gcgccgctcg gccggtggct accttgggca
     1441 ggagttccgc gcggctccga ccaataagat cgtgcgagat ctggaagaat ccgaagccga
     1501 ggccgaggtc cgctgcttct gaacccggtc aggcccgcgt cacggaccat tgttggctga
     1561 acgtgccgcc ttcgctgtcc ttcatttcag cgcgaa
//
LOCUS       DATAVD010000107         4284 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3360802, whole genome shotgun sequence.
ACCESSION   DATAVD010000107 DATAVD010000000
VERSION     DATAVD010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4284
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3360802"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            282..2351
                     /locus_tag="VHX39_01875"
     CDS             282..2351
                     /locus_tag="VHX39_01875"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX3989899.1"
                     /translation="MNAFIRIASDDTITIYSKSPEIGQGIKTAFGVIIADELDADWNR
                     VVMEQADINPKVYGYQGAGGSTSIPRAWDQLRQAGAGAKALLIAAAASQWQVDPSQIT
                     ATASVLTHAASGRSATYGSLAGAAAKLPVPDPKTLKLKTRAEYRLIGKRYHGVDDPKV
                     VSGQPLFGIDVQRPGMVYANFTKCPAAGGKVRGFNVDEIKVQRGVLDAFALDGTGLFV
                     EVMPGVAIIARDTWSAFQAKDKLKVDWDLSEASKDSSSQFSAQARKLAASFPAKPDND
                     VGDVDKSFANAARTVEAYYEYPFAAHVPLEPMNTTAHWHDGVMEMWVPTQQPDRGLPQ
                     VAKVAGISPDKIVMHQTRVGGGFGRRLVNDYTCEAAAIARKVNAPVKLQWTREDDFGH
                     DFYRPAGYHQLKGAIDKDGRLDAWREHFITFTADGKKEVTGGNLTDNLKYSIKAPNLR
                     RAKTMFPLRIPTGAWRAPGDNAQVFAAQGFMHELSVAAGRDHVQFLIDAVNRDVPDLA
                     PKDPRVNFSPKRATDVITMCAEKAGWGKKLANGSGLGLAWCYSHAGHTAQAVELSVDA
                     DKQIKVVRIVVVLDVGPIIDMAGSEAQAQGASTDALSTAMGLKINIENGLVQEQNYNA
                     YPILRLPFAPMTIDAYFIQSEHPPTGMGEPAFPALAPALGNAIFAATGERVRRMPLRD
                     LGYSLAV"
     gene            complement(2736..2975)
                     /locus_tag="VHX39_01880"
     CDS             complement(2736..2975)
                     /locus_tag="VHX39_01880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989900.1"
                     /translation="MAGSAPGSTIMTGGGGENAFVFFKQAVGGAADIITDFNPADSVY
                     IEGCAAGTASELLDASKVSTAGLTLTLSDGTSVTF"
     gene            complement(2942..>4284)
                     /locus_tag="VHX39_01885"
     CDS             complement(2942..>4284)
                     /locus_tag="VHX39_01885"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX3989901.1"
                     /translation="STTGVVTITGTAAAITAALDALVFTPIAQSNADVTTTQFTINPG
                     AGGTPDSTTSVTSVQQVLGLASVPTNQIAISVSPDGSAFAPAHYGKTNEAVVTDPAET
                     DTYSVPTGYAALFAGGTADVTLSDSAVGNAILVANQGNDELIAGAPNDILVAGSGNDS
                     LVGGKDASTVEGGTGAATVFAGAGAMHVIEGSGPLFFSGNSNAGSTIFGGAGPLSADL
                     TGDHQTASVGGSAATITAAGSGDDVIGGTSSLSVTFTGSADTVQAGTGSNSLVSSGSG
                     NLIIGSTIPGAGGLLVTETGTNDTIQGGANPTTVTASSATQVYGGSGGLNFVGGTGTA
                     TVFGGTGADSVTAGAGGVVFNVDAANNATVNRGTGAVTVFGAPNATVNLTGSSGLPDF
                     LVAGGGNETLNAAGSSSSNCLRSKRRCRVRQRSPWSADQATIRWWRVPPRGPRS"
BASE COUNT          827 a         1386 c         1288 g          783 t
ORIGIN      
        1 agacaaggac gtggtcagct tgcgaaagca ggcgacccag caatcccgtt ccgcggaggc
       61 tcccaatggc tgacatccag tccaacccgg ctctgtccga tgcttatctc tcagcgctga
      121 tgcgtgaggt gcacaccgta ccaacagccg gcacctcgat gatcactgga cggcgcagtc
      181 tgttcaaact ggccggagct ggcgccgcgg gactggtact gggcttttac ctcggagacg
      241 aagcgtccgc agcggaggca gcgaatggca aagacgaggt gatgaacgcg ttcatccgta
      301 tcgcctcgga cgacacgatc acgatctatt ccaaaagccc ggagatcggg cagggcatca
      361 agaccgcatt cggcgtgatc attgcggacg aactcgatgc cgactggaac cgcgtcgtga
      421 tggaacaggc tgacatcaat cccaaggtct acggctatca gggcgcggga ggttcgacct
      481 ccattccccg cgcctgggac caactgcgcc aggctggcgc cggtgccaag gccctgctga
      541 tcgccgccgc cgccagccag tggcaggtcg atccgtcgca gatcactgcc acggcttcgg
      601 tcttgaccca tgcggccagc ggcaggtccg cgacctatgg ttcgcttgcc ggtgccgcgg
      661 cgaaactgcc ggtgcctgat cccaagaccc tgaagctgaa gacccgcgcc gaataccgtc
      721 tgatcggcaa acgctatcac ggcgtggacg atccgaaggt cgtcagcggg cagccgctgt
      781 tcggcatcga tgtccagcgt cccggcatgg tctatgccaa cttcaccaaa tgccctgcag
      841 cgggcggcaa ggtccgtggc ttcaatgtcg acgagatcaa ggttcagcgc ggcgtgctgg
      901 acgcctttgc cctggacggc accggcctgt ttgtcgaagt gatgccgggc gtcgctatca
      961 tcgccaggga cacctggagc gcgttccagg ccaaggacaa gctcaaggtg gattgggacc
     1021 tcagcgaggc gtcgaaggat tccagctcgc aattctcggc gcaggccagg aagctggcgg
     1081 ccagtttccc ggcaaaaccg gataacgatg tcggtgacgt tgacaaatcc ttcgccaatg
     1141 ccgccaggac cgtggaggcc tattacgaat atccctttgc cgcgcatgtg ccgctggaac
     1201 ccatgaacac gacggcgcac tggcatgatg gggtgatgga aatgtgggtg cccacccagc
     1261 agcctgatcg tggcttgccg caggtcgcga aggtggccgg catttcaccg gacaaaatcg
     1321 tcatgcacca gacccgggtc ggcggcggtt tcgggcggag gctggtcaat gattatacct
     1381 gcgaggccgc ggccatcgct cggaaggtca atgccccggt taagctgcaa tggacccggg
     1441 aagacgattt cggccacgac ttctaccgtc ccgccggcta ccatcagtta aagggtgcga
     1501 ttgataagga tggtaggctc gacgcctggc gggagcattt catcaccttc accgccgacg
     1561 gcaaaaagga agtcacgggc ggcaacctca ccgacaatct gaaatactcg atcaaggcgc
     1621 cgaacctgcg ccgcgccaag accatgttcc cgctaaggat tcctaccggc gcatggcgcg
     1681 cgccgggcga caacgcccag gttttcgccg cgcaaggctt catgcacgag ttgtcggtcg
     1741 ccgcgggccg cgatcatgtc caattcctga tcgatgccgt gaatcgcgac gtgcccgatc
     1801 tggcgcccaa ggacccgcgc gtcaacttca gccctaagcg ggccaccgac gtgatcacga
     1861 tgtgcgccga aaaggcaggc tggggcaaga aactggcgaa tggcagcggc ctgggcctgg
     1921 cctggtgcta ttcccatgcc ggccataccg cgcaggcggt tgaactcagc gtggatgccg
     1981 acaagcagat caaggtcgtc cgcatcgtcg tggtgctcga tgtcggcccg atcattgaca
     2041 tggcgggttc cgaagcccag gcgcagggcg cgtccaccga cgcgctctcc accgccatgg
     2101 gccttaagat caacatcgaa aatggcctgg tccaggagca gaactacaac gcctatccca
     2161 ttctgcgctt gcccttcgca ccaatgacga tcgacgccta cttcatccaa tcggagcacc
     2221 cgccgaccgg tatgggcgaa cccgctttcc ccgcgctggc acccgcactt ggcaacgcca
     2281 ttttcgcggc cactggagag cgtgtgcgcc ggatgccgtt gcgcgatcta ggttattcgc
     2341 tggctgtctg acacatcggc ctcatgtttg cccaaaagcg aattgtctgc tttcgagcag
     2401 ccactttgaa cgcgggatct ctggaatggg cgcagagccc cggacgatgg actccgcagg
     2461 taaaggggaa ggtcgtgagt tcaatccttc ccgggcgaac caattttttc aatgggttat
     2521 caggtgtttt tccggcccga ccaacccgcg atgttccagg cgaacaatgg cgaaaaccga
     2581 acggtcgggt ccgctgggtc aattcgcgtt tctggggaca caagcatagg cgtccgtcgc
     2641 actccacgct ggatcaggtg accgaccgca gtgcctcaca attaccctca gccgtattgg
     2701 atcttgccct tcagcgcgga ttgatccctc aggttctaaa atgtcactga ggtgccgtcg
     2761 ctcaacgtca gagtcaggcc ggccgtggac acctttgacg catcgagcaa ctcactcgcg
     2821 gtaccagccg cacagccctc gatataaacc gagtcagctg gattgaaatc ggtaatgata
     2881 tcggcggcgc cgccaactgc ttgtttgaag aacacgaacg cattctcgcc accgccgccg
     2941 gtcatgatcg tggaccccgg ggcggaaccc gccaccagcg tatcgttgcc tgatccgccg
     3001 accatggcga tcgctgccgc acacgacacc gtcgtttcga ccgaagacaa ttcgatgagg
     3061 acgagccggc cgcgttaagc gtctcattgc ctcccccggc gaccaggaag tccggaaggc
     3121 cgctgcttcc cgtcaaattc accgtcgcat ttggggcgcc aaagaccgtc accgccccgg
     3181 ttccgcggtt cactgtcgcg ttgttggcag cgtccacgtt gaacaccacg ccaccggcgc
     3241 ccgccgttac cgagtcggcg ccggttccgc caaacacggt cgcagtgccc gtgccgccga
     3301 cgaagttcag accacccgag cccccgtaaa cctgcgtggc actcgatgcc gtcaccgtgg
     3361 ttgggtttgc gccgccctga atggtatcgt tggttccggt ttctgtaacc aacaacccgc
     3421 cggccccggg gatggtgcta ccgataatca aattgccgga gccacttgag accaaactgt
     3481 ttgagcccgt accggcctgc accgtgtctg ccgagccggt gaacgtaaca ctcagcgacg
     3541 atgtaccgcc gatcacatcg tcgccgctgc ccgccgcggt aatggtcgcc gcactgccgc
     3601 cgactgatgc cgtctgatgg tccccggtca ggtcggcgga cagcggaccg gcgccaccga
     3661 agatcgtgct gccggcgttg ctgttgccac tgaagaacaa agggcccgag ccctcgatga
     3721 catgcatggc accggccccg gcgaataccg tcgccgcgcc cgtacctccc tccaccgtgc
     3781 tcgcgtcttt gccgccgacc aggctgtcat tgccgctgcc ggcaaccaga atatcgttcg
     3841 gcgcaccggc gatgagttcg tcattgccct gattggccac caggatcgca ttgccgaccg
     3901 cgctgtcgct cagcgtgaca tccgcggtgc cgccggcaaa taacgccgcg taaccggtgg
     3961 gcaccgagta cgtgtcggtc tccgccggat ccgtgaccac cgcctcgttc gtcttgccgt
     4021 aatgggctgg agcaaatgca cttccgtccg gtgaaaccga gatcgcgatc tgattggttg
     4081 gcaccgacgc gagaccgaga acctgctgca ccgaggtgac acttgtcgta ctgtccggag
     4141 tgccgcccgc cccgggattg atcgtgaact gagtggtcgt tacgtcagcg ttcgactgtg
     4201 cgatcggcgt gaacaccagc gcgtcgagcg ccgcggtaat ggcggccgcg gttcccgtta
     4261 tcgtaacgac gccggtcgtc gagt
//
LOCUS       DATAVD010000108         5826 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3174083, whole genome shotgun sequence.
ACCESSION   DATAVD010000108 DATAVD010000000
VERSION     DATAVD010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5826
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3174083"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..875)
                     /locus_tag="VHX39_01890"
     CDS             complement(<1..875)
                     /locus_tag="VHX39_01890"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEX3989902.1"
                     /translation="MPTVTIRQCAVLVGGLGTRLGSLTETIPKPLLIRGERPFLAWLL
                     RELCRFGVTEFLLLTGHLSEAVERALPAIRAKLPKPVTISVCREPVRAGTGGAVFHAR
                     EHLSERFLLCNGDSLFDTNLATLLAAAAADGPEVVGRMLLRQSPDASRSGVVTIEGDQ
                     VVTFQQRPPAGSAAIINAGVYVFQRRLLDALRPVCSLEADILPGIATAGALRGTLNEG
                     YFRDIGVPEDFARADHELRTLRGRRALFLDRDGVVNVDHGHVGSRERFEWVHGALETI
                     RYATETGWHVFVVTN"
     gene            1263..1997
                     /locus_tag="VHX39_01895"
     CDS             1263..1997
                     /locus_tag="VHX39_01895"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3989903.1"
                     /translation="MQRSPTKTALITGANKGIGFEVARQIGRSGVTVLLGARNRTAGQ
                     AAAAMLASEGLAAAFVAIDVTDRASIATVAAGIDAEIGCLEILVNNAGINDPADGQPS
                     AADLDAVERVFRSNFLGALAVTQAMLPLLRKARSGRIVNVSSGLGSLAQNGDPNYSSA
                     AVKLIGYSASKAALNMFTVQLAYELRGTAIKVNSADPGYTATDLNGHRGHQTIPEGAA
                     EIIRLALLAENGPTGSFSNRDGVVPW"
     gene            2404..2853
                     /gene="cynS"
                     /locus_tag="VHX39_01900"
     CDS             2404..2853
                     /gene="cynS"
                     /locus_tag="VHX39_01900"
                     /EC_number="4.2.1.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008824 - cyanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009636 - response to toxic substance
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanase"
                     /protein_id="HEX3989904.1"
                     /translation="MNDAKTALGQKIIAAKKQKKWTWPDIAAKLEYSPVWTCAACLGQ
                     MSMTEATAKKAGELFNLSDAEVELLQEPPYRGSLPTAVPTDPLIYRFHELVQVYGTTW
                     KELIQEEFGDGIMSAIDFDMTLERQPDQKGDRVKLTMSGKFLPYKRY"
     gene            2921..3802
                     /locus_tag="VHX39_01905"
     CDS             2921..3802
                     /locus_tag="VHX39_01905"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX3989905.1"
                     /translation="MRSWIQHQADIATLARCQLFFIGGAPRSGTTWVQQILDRHPEIA
                     CRGEGLFQKHLSEPLAALFDNRSEALAAKNTALFGHTGGFPLPTQEDQEVLLGTAILL
                     ALRQCSAGKACRAIGEKTPENVFFFPRLKRLFPRAKCIAVARDPRDVLTSAWHFFHRP
                     AAGEDDIAAKFAFIRLALPSLDQGARAMIDLAAQYPADVMTITYERLRRTPELVAANM
                     FRFLSVSDAPAVTADCVAGTAFAAQTGGRSEGVAQDGAFLRKGIAGDWPSTLTPAMNE
                     LILSELGWMFPHFGWSM"
     gene            complement(3822..4235)
                     /locus_tag="VHX39_01910"
     CDS             complement(3822..4235)
                     /locus_tag="VHX39_01910"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3989906.1"
                     /translation="MLTFDLGAEQEFNPVRHVEKILGVVGEGDVTVACWAPGQTSPNH
                     LHPNATEIYFCFSGGGIMRTPSGEVPVKPGSFVVHPRGELHEYVNGPQQTLLFRVRYG
                     EDMSTRSKDWPTNTSFHAKPEDAAFFGAFPDGVVA"
     gene            4448..5248
                     /locus_tag="VHX39_01915"
     CDS             4448..5248
                     /locus_tag="VHX39_01915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989907.1"
                     /translation="MNAIRLTLVLCCLLPLPAWGQIVQRVVSLNLCTDQWLVLLAPEK
                     VAGLSPLAGDPALSFVADAAARLPMVRASAEAVMALHPDLVLGARFGAQTRLGLLERA
                     GLQVEKLDIPTDFPGIRTALRTTAALLGVPGRAAPLIDAMDAALPLPERQPIRALMWE
                     PRGWTSGPGTMLDAIVRAAGMINAGTGGRVGLEALLRQPPDLLVLPEDAAGASLATEM
                     LVHPAVRGIAVHTIPRALTICPGPFTAAAVARLQHWRAQDSSQTGSIR"
     gene            complement(5227..>5826)
                     /locus_tag="VHX39_01920"
     CDS             complement(5227..>5826)
                     /locus_tag="VHX39_01920"
                     /inference="COORDINATES: protein motif:HMM:NF017820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEX3989908.1"
                     /translation="SRAEPGVARLERIIMASPILAPIVSQWEAITLPDCWLVAGAVVQ
                     AVWNDLFGLEPNHGVKDVDLVYFDDSDLTQQTEANHEARIRELFSGEGITIDVKNEAR
                     VHLWYARKFGGKIAPYTSTWHAITTFPTTATAIGVQPAGSGLLISAPFGLADLLGAIV
                     RPNKVQITEAIYAAKVMRWRACWPGLTIVDWADHRIEPV"
BASE COUNT         1105 a         1835 c         1814 g         1072 t
ORIGIN      
        1 tggttggtga cgacgaagac gtgccagccg gtttcagtgg cataccggat cgtttccagc
       61 gcgccgtgca cccattcgaa tcgctcgcgc gacccgacat ggccgtgatc gacgttgacc
      121 acgccatcac ggtccagaaa caatgcccgc cgcccgcgca acgttcgcaa ttcgtgatca
      181 gcgcgagcga aatcctccgg cacgccgatg tcgcggaaat acccttcgtt cagggtccca
      241 cgcagtgcgc cggcggtggc aatcccgggg agaatgtctg cctccaatga gcaaaccggc
      301 cgcagtgcgt ccagcagccg ccgctgaaac acgtagaccc cggcgttgat gatggccgcc
      361 gacccggctg ggggccgttg ctggaacgtc acgacctggt cgccctcgat ggtcaccacg
      421 ccggagcgcg acgcgtccgg tgattgccgg agtaacatcc ggccgacgac ctccggcccg
      481 tccgctgcgg cggcggccag caaagttgca agattggtgt caaacagcga gtcgccgttg
      541 cacaacagaa accgttcact caggtgctca cgcgcgtgga acaccgcgcc gccggtgccg
      601 gcccgcaccg gttcgcgaca gaccgagatg gtgaccggct tcggcagctt cgcccggatc
      661 gccggcagcg cgcgttcgac cgcttcggac aggtgcccgg tcagcaacag gaactcggtg
      721 acgccgaagc ggcaaagttc gcgcagcagc caggcaagaa acggccgctc tccgcggatc
      781 agcagcggct tcgggatcgt ctcggtcagc gaaccgaggc gcgtgccgag accaccgacg
      841 agcacggcac attggcggat ggtgacggtc ggcatgggac gtctcttgct gcctggtcgg
      901 aagggcctga cgccggcggc gtccggatca actgagggat cgacgacgcg gtgtcatcgc
      961 gtgggttggc gaaaggcatc ataaacaacc ggcggagcaa cgccaggtga tcgcgcgggt
     1021 ttttcgtatt accgccaatg gcaagcgtcc ggttcagtca cctcgtttcg acagcaattc
     1081 ggtttggctg ctgatcggga tgggatcgaa gcgggaccgg aacgatattc ccggcggctc
     1141 atcgacgccg tccccggcct gtgcctcccc cggcgattgc gatatgcaaa gaacgccgag
     1201 tccagcccag ccaaacaggc atccgtgtcg gaccggaaaa ccccagcggg agccagcgaa
     1261 acatgcagcg ttcaccgaca aagaccgccc tgatcaccgg agcgaacaaa ggcatcggct
     1321 ttgaggtcgc gcgccagatc ggccgcagtg gggtcaccgt actgcttggt gcacgtaacc
     1381 ggaccgccgg acaggccgcc gccgccatgc tcgccagcga aggtctcgcc gcggcattcg
     1441 tcgccatcga tgtcaccgac cgtgcctcga tcgctacggt ggccgccggc atcgatgccg
     1501 agattggttg cctcgagatc ctggtcaata atgcgggcat caacgatccc gcagacgggc
     1561 agccctccgc ggctgacctg gatgccgtcg aacgtgtgtt ccgcagcaat tttctcggtg
     1621 ctctggcggt gacccaggcg atgctgccgc tgctgcgcaa agcacgctcg ggacggatcg
     1681 ttaacgtttc cagcgggctc ggttcgctgg cgcaaaatgg cgacccaaac tattcgtccg
     1741 ctgccgtcaa gttgatcggc tacagtgcct ccaaggccgc actcaatatg ttcaccgtgc
     1801 agcttgccta cgaacttcgc ggcacggcga tcaaggtcaa ttcggccgat cccggataca
     1861 cggcgaccga tctcaacggt caccgcgggc atcagaccat tccggagggg gcggctgaaa
     1921 tcattcgcct tgcgctgttg gcggaaaacg gaccgaccgg cagcttttcc aaccgggacg
     1981 gcgtcgtccc gtggtaacag cggcggcggt cgttgcgata cttttacaaa ggcaatgatc
     2041 cgggcactcg gcatctggtg cgaatgttgc actgcccagg aagcgggtcg gggttggcgc
     2101 gaacgggatg tccaaatgat caaattacca gcaaagcggt ctgatcgaca tggatattga
     2161 cgacaattca ggccaatgcc tatattctga ccgctatgat atggctgcct tacgatcgaa
     2221 caaacgcccc tttcgccgtc atggccagcc ttccgaagat ggggttgtga catgacggtg
     2281 tggcaacggt actcggaaaa gccattggca ttcgccgcat ttcgcttcgc gcgtgccgac
     2341 ggcgcggcag cttttcccgg cgccgcaccg aaccccagat gacatccgcg acaggagatc
     2401 gcagtgaacg acgccaaaac cgctctcggc cagaagatca tcgcagccaa aaagcaaaag
     2461 aaatggacct ggccagacat cgccgcaaaa ctcgagtatt cacccgtctg gacctgcgcg
     2521 gcttgtctgg gccagatgtc gatgaccgaa gcgaccgcaa agaaagccgg cgagttgttc
     2581 aatctgagcg acgcggaggt cgagctgctg caggaaccgc cctatcgcgg cagcctgccc
     2641 accgcggtgc cgaccgatcc tctgatttat cgcttccacg aattggtcca ggtctatggc
     2701 accacctgga aagagttgat ccaggaggaa ttcggcgacg gtatcatgag cgcgatcgac
     2761 ttcgacatga cattggaacg ccaaccggac cagaagggcg accgggtgaa gctgaccatg
     2821 agcgggaagt tcctgccgta taagcgatat tgattgccaa cgccggacca tcgcggcagc
     2881 atcaggttcg aggccagcaa ggattgacgg gacgcaccag gtgcgcagtt ggatccaaca
     2941 tcaggcggac atcgcgacat tggcgcgttg ccaactgttt ttcattggcg gcgcgccgcg
     3001 ctccggcact acctgggtgc agcagatcct cgatcgccat cccgagattg cctgccgcgg
     3061 cgagggcctg tttcagaagc atctctccga gccgctggct gcattgtttg acaatcgttc
     3121 cgaggctctc gccgccaaga acaccgcgtt gttcggccac accggcggct tcccgctgcc
     3181 gacacaggag gaccaggagg tcttgctcgg cactgccatt ctgctggcac tgcgccagtg
     3241 cagcgccggc aaagcctgtc gcgcgatcgg cgaaaaaacc ccggagaacg tgtttttctt
     3301 tccccggttg aaacgcctgt ttccgcgagc gaaatgtatc gccgttgccc gcgacccgcg
     3361 tgacgtcctg acgtccgcct ggcatttttt ccaccgaccg gcggccggcg aggatgacat
     3421 tgcggcgaag ttcgccttca tccggttggc gttgccctcg ctggatcagg gcgcgcgggc
     3481 aatgatcgac ctcgcagcgc agtaccctgc ggatgtcatg acgattacgt acgagcgtct
     3541 gcgccgcaca ccggaactcg tggccgccaa catgtttcgc tttctgagcg tatcggatgc
     3601 ccccgccgtg actgcggatt gcgtggcggg caccgcattc gcggcgcaga ccggaggccg
     3661 atccgagggc gtcgcgcagg acggcgcgtt cctgcgcaaa ggcatcgccg gcgactggcc
     3721 gtcaaccctg acgccggcga tgaatgagct gatcctgtca gaactggggt ggatgtttcc
     3781 gcatttcggt tggtctatgt gatgttattc cagggccgga atcaggcgac aacgccgtcg
     3841 ggaaacgcgc cgaagaacgc ggcgtcctcc ggtttggcat gaaacgacgt gttggtgggc
     3901 caatccttgc tgcgcgtcga catgtcttca ccataacgca cgcggaacaa cagcgtctgc
     3961 tgcggaccgt tgacgtattc gtgcaactcc ccacgcggat gcacgacgaa gctgcccggc
     4021 tttaccggca cttcgcccga cggcgtccgc atgatcccgc caccggagaa acaaaaataa
     4081 atctccgtcg cgtttggatg caggtggttc gggctggtct ggcccggagc ccaacaggcg
     4141 accgtgacgt cgccttcgcc gacaacgccg aggattttct cgacgtgacg gaccgggttg
     4201 aattcctgtt cggcaccgag atcgaatgta agcatggcac gccctctctg gtttgcctcg
     4261 catggtaacc ggttgtcacg cgattgcacg agctttaagc atggccgtca aaacgggagg
     4321 gtccgggcca tggtcaaatg tgcgtgtcgc cgcatcctgg ccgccttatg ttgcgtttcc
     4381 gcattgcttt tggcgggcgg tcaaccggca tcgatgcgag gcctgccgca ctgacgcaag
     4441 cggcggcatg aacgcgatcc gcctcactct ggtgctgtgc tgcctcctgc cgctgccggc
     4501 gtggggtcag atcgtgcagc gcgtcgtatc gctcaatctt tgcacggacc aatggctggt
     4561 gctgctggca ccggaaaagg ttgccggcct gtcgccgctg gccggtgatc cggcgttgtc
     4621 gttcgttgcc gacgcggcgg ccagactgcc gatggtccga gcctcggccg aagcggtgat
     4681 ggcccttcat cccgatctgg tactaggcgc gcgcttcggt gcgcagacga ggctcgggtt
     4741 gctggaacgg gccggattgc aggtcgaaaa gctcgacatt ccgaccgact ttccgggcat
     4801 ccgaacggca ctccgcacca cagccgcgct gctcggcgtt cctgggcgtg ctgcgccgct
     4861 gattgacgcc atggatgccg cgttgccttt gcccgaaagg cagccgatcc gggcgctgat
     4921 gtgggagccg cgcggttgga catccggacc cggaacgatg ctggatgcga tcgttcgcgc
     4981 ggctgggatg atcaacgccg gcaccggcgg ccgggttggg ctggaggcat tgctgcgcca
     5041 gcctcccgac ctgctggtat tgccggaaga cgcagccggc gcctcgctgg cgaccgagat
     5101 gctcgtgcat ccggccgtgc gcggtatcgc ggtccacacg atcccgaggg cactgacaat
     5161 ctgtccggga ccgttcacgg cggcagcggt ggcacggctg caacactggc gcgcacagga
     5221 ttcgagtcag acgggttcaa tccggtgatc ggcccaatcg acaatagtta gcccaggcca
     5281 acaagcccgc caacgcatca ccttcgccgc atagatcgcc tcggtgatct gcactttgtt
     5341 tggccgcacg attgcaccga gcagatcggc aagcccgaac ggggccgaga tcaaaagccc
     5401 ggacccggcc ggttgcacac caatcgcagt cgcagtcgta gggaatgttg tgattgcatg
     5461 ccatgttgaa gtgtatggcg cgattttgcc gccaaacttc ctggcatacc acaggtggac
     5521 acgcgcctca ttctttacgt cgatcgtaat tccttcaccg gaaaacagct ctctgattcg
     5581 cgcttcatgg ttggcttcgg tctgttgcgt gaggtcggag tcatcgaaat agaccaggtc
     5641 gacgtccttc acgccatgat tcggttcaag gccaaacagg tcgttccaga ccgcctgcac
     5701 tacggctccg gcgaccaacc agcaatccgg taacgtgatc gcctcccact ggctgacgat
     5761 cggcgccaga atcggactgg ccattatgat gcgttcaagt ctggccacac caggttccgc
     5821 tcggct
//
LOCUS       DATAVD010000109         1518 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3548113, whole genome shotgun sequence.
ACCESSION   DATAVD010000109 DATAVD010000000
VERSION     DATAVD010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3548113"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..468)
                     /locus_tag="VHX39_01925"
     CDS             complement(<1..468)
                     /locus_tag="VHX39_01925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX3989909.1"
                     /translation="MVRPGVDWTAELDRWLEPFMKALGHSTRRRMCPAYVAGLIGPGD
                     RKSIQPMAARDNGVSYDQLHHFIGSGVWDAAPLETALLVEANKLVGGENAWLIIDDTA
                     LPKKGRHSVGVAPQYASALGKTANCQSLVSVTLASREVPVMVGLRLFLPQTWTD"
     gene            complement(579..1339)
                     /locus_tag="VHX39_01930"
     CDS             complement(join(579..1006,1006..1339))
                     /locus_tag="VHX39_01930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611908.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEX3989910.1"
                     /translation="MSDLFLLSERQMARISPFFPLPHGVPRVDDRRVISGIIYVIRNG
                     LQWRDAPKAYGPHKTLYNRFVRWSLLGVFDRIFVALATEGRKPERIMIDATHLKAHRT
                     AASLAQKGAFPRCLGRTKGGLNSKLHAVCDEAGKPILLHLTAGQVSDHKGARALLPHL
                     PQAAALIADRGYDSNWFRDSLAERGTIPCIPPTKNRKKALEYDKTLYRQRHKIENMFA
                     KLKDWRRIATRYDRCAHTFFSAICIAASVAFYLKE"
BASE COUNT          324 a          459 c          445 g          290 t
ORIGIN      
        1 gtccgtccag gtctgcggca gaaatagccg aagaccaacc atcactggca cctcgcgtga
       61 cgccagcgtc accgaaacca gagactgaca gttggcggtc ttgccaagtg ccgaggcata
      121 ttgtggcgca acgccaaccg aatggcgccc cttcttcggc aatgccgtgt cgtcaatgat
      181 caaccaggca ttctcgcccc caaccagctt gttggcttca acgagcaaag ctgtttccag
      241 cggggccgca tcccagacgc cgctgccgat gaaatggtga agctgatcat aactcacgcc
      301 gttatcacgg gcggccatcg gctgaatgct cttgcgatcg ccagggccga tcagcccagc
      361 cacataggca gggcacatcc gccggcgcgt gctatgccca agcgccttca tgaacggctc
      421 aagccaacga tcgagctctg cagtccagtc cacccccggg cgtaccatgg tcagcctcgt
      481 caatgccgac cacccatgaa tcactcaaaa gccgattcgg gaatcctaaa aacaaccgca
      541 gtcaataaaa tctaccaaag tagtgctagg gtcaggactc attccttgag atagaaagcg
      601 actgaggctg cgatgcagat ggccgagaag aaggtatggg cgcagcggtc atagcgtgtg
      661 gcgatgcgtc gccagtcctt gagcttggcg aacatgttct cgattttgtg gcgctggcgg
      721 tagagcgttt tgtcatattc caacgctttc ttgcggtttt tggtaggcgg gatacagggg
      781 atggtgccac gctcggcgag gctatcgcgg aaccagttac tgtcgtagcc gcgatcggcg
      841 atcagcgcgg cggcctgtgg caggtggggc agaagcgctc gggcgccctt atggtcgctg
      901 acctgcccgg cggtgaggtg cagcaggatt ggctttccgg cctcatcgca gacggcgtgc
      961 agcttggagt tcaggccgcc ttttgttcgt cccagacagc ggggaaagcc cccttttggg
     1021 ccaggctggc cgccgtgcgg tgggccttca ggtgcgtggc gtcgatcatg atccgctcgg
     1081 gcttgcgacc ctccgtggcc agcgccacga agatgcggtc gaacacgcca agcaggctcc
     1141 atcgtacaaa gcgattgtat aaggtcttgt gcgggccata ggctttcggg gcatccctcc
     1201 actgtaaccc gttccggatc acgtagatga tcccgctgat cacccgccgg tcatcaaccc
     1261 gaggcacacc gtgcggcagt ggaaaaaacg gcgatatccg cgccatctgg cgctcactca
     1321 gcaaaaacag atcagacatg gcgaaggcac ctccgccata tccagaatca caccatgccg
     1381 cgccgagaca agaggttaat gggtcctgag cctaggtcgc cgcactcccc gcgcaattaa
     1441 aagcaagctt aaggattctt aactgcatcg gctgctttat cggaatgaat gagctgtaag
     1501 gccgcgcggc caaccgcc
//
LOCUS       DATAVD010000110         3669 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_10841, whole genome shotgun sequence.
ACCESSION   DATAVD010000110 DATAVD010000000
VERSION     DATAVD010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3669
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10841"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1298
                     /locus_tag="VHX39_01935"
     CDS             <1..1298
                     /locus_tag="VHX39_01935"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEX3989911.1"
                     /translation="HIWDSFDAAHDIHIGRFTISDFEGKHRFLMLPEVLAYSSNLGAA
                     HIAMIMGGARQRAWLKNMGMFDRVPIELSEASPPQVHSEAAWGEVVTMTVGFGHGISE
                     TPLNIVAGTAAIANGGVYVKPTILAVDPTKPPEGRRVMQKSTSDLMRRLMRLVVTNGF
                     GKKAEVAGYFPGGKTGTAEKNKGHGYEKHANVSAFMSVFPMQAPRYAVYMMLDEPHGN
                     ASTGGYSTAGQVAAPAAGKVIARVGPIMGLMPDIKDAAQIEQALAIPLQPAKGLVLGP
                     IKVTEPATDPTFHPPEAVAGPVADETAQPDQAHRTQAEPANPQARPATVPAHLSKPGL
                     LHKVQTGPARRPSAPAQSQPPVDAPQPDWLHKTEFDAAPGNPVVAPSGQPVAEPSSGL
                     LHPIRFDPISAGPMSSPSCNRHSLDLACGILSSAPTVAA"
     gene            1357..2790
                     /locus_tag="VHX39_01940"
     CDS             1357..2790
                     /locus_tag="VHX39_01940"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011251749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEX3989912.1"
                     /translation="MAGVEIGRVTVDSRQVRPGDLFVAVPGVFVDGRDFIPEAVRNGA
                     VAVLATNGTFWPPEVPPRALLTDPEPRRMLALIAAVLAGVRPETVVAVTGTNGKTSAV
                     DFLRQIWGLAGYRAASVGTLGLIASGFEPGPGLTTPDPVSLAETLSSLAQNDIQHVAI
                     EASSHGLDQFRLDGVRLAAAGFTNLTRDHLDYHVTMAAYRAAKLRLAGALLPPRSPFV
                     AHSDMDPVTLEALRAVAIARRLTFHTVGEAGSLFRVVDAVPRPDGQLVTVEIPAEAGG
                     TASPGRHEVLLNLPGRFQADNVLVAAGLAYVLGLDTVLDLLPRLKGVRGRMELAALLP
                     NGAAAYVDYAHTPDALERLLSALRPHTAGKLHIVFGAGGDRDRGKRPLMGEVAARLAD
                     HIIVTDDNPRGEEPQAIRAAVLAGCPDAREIGDRASAIEAALNDLEAGDVLVVAGKGH
                     EQGQTIGGVVYPFDDVSVIQGLVGVHS"
     gene            2790..>3669
                     /locus_tag="VHX39_01945"
     CDS             2790..>3669
                     /locus_tag="VHX39_01945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HEX3989913.1"
                     /translation="MPPDLPLWTAAELLEATGGRFGAQFDASGVSIDTRTIQPGDLFV
                     ALVGESGDGHDHAGRAIEAGAAGVMVHRELSAIAHRLVVDDTLAGLTRLGAFARGRFT
                     GRVVAVTGSVGKTTTKEMLRIALSAFGPVHAAVASYNNHWGVPLTLARIPRAADASSL
                     HAANDAFCVVEIGMNHAGEIAPLARLAKPHVAVITTVEAAHIGHLGSMAAIAEEKAAI
                     LQGLDAAGVAVLPAESPWFPLLRDHAGTNRVLGFGSAHGAVARLTHIEPGADFSIIVV
                     DVADRELRMRLNAPGRH"
BASE COUNT          617 a         1164 c         1202 g          686 t
ORIGIN      
        1 tgcacatctg ggattcgttt gacgcagcgc atgacattca catcggccgg ttcacgatca
       61 gcgacttcga aggcaaacac cggtttctca tgctgccgga ggtgcttgcc tactcctcca
      121 acctcggagc ggcgcacatc gccatgatca tgggaggcgc ccggcagcgt gcgtggttga
      181 aaaacatggg gatgttcgac cgggtcccga tcgaactatc cgaagcttcc cctccgcagg
      241 tccactccga agccgcgtgg ggtgaggtcg taacaatgac cgtcggattt ggccacggca
      301 tttccgaaac accgctgaat atcgtcgccg gaaccgcggc cattgccaac ggcggtgttt
      361 acgtgaagcc caccatcctc gccgtggatc cgaccaaacc gccggagggt cggcgggtga
      421 tgcaaaagtc cacgtctgac ctgatgcgcc ggcttatgcg gctggtcgtc accaacgggt
      481 ttggcaagaa ggcagaggtt gctgggtatt ttcctggcgg caagaccggc acggccgaaa
      541 agaacaaagg ccatggctac gagaagcacg ccaacgtctc ggcgttcatg agtgtgtttc
      601 cgatgcaggc gccgcgctac gcggtttata tgatgttgga cgaaccgcac ggcaacgcgt
      661 cgaccggcgg atattcgacg gcgggacagg tcgccgcccc cgcggcaggc aaggtcatcg
      721 ctcgcgttgg gccgatcatg ggcctcatgc cagacatcaa ggacgcagcg caaatcgagc
      781 aggcacttgc aattcctctg cagccggcga agggcctcgt actcgggccg atcaaagtga
      841 ccgagccggc gaccgacccg acgttccacc cccctgaggc agtggcgggc cctgtcgcag
      901 atgagacggc gcagcctgat caggcgcacc ggacccaggc ggaaccggcc aatcctcagg
      961 cccggccggc cacggttccc gctcacctgt cgaaacccgg cttgctgcac aaggtgcaaa
     1021 cgggtccggc ccgtcgtccc tcggcaccgg cccaatccca accaccggtt gacgcgccgc
     1081 aacccgattg gctgcataag acagagttcg acgccgcacc cggaaatccg gtggttgcgc
     1141 catcgggaca gcctgttgcg gagccatcgt ccggtctgct gcaccccatt cgtttcgacc
     1201 cgatttccgc cgggccgatg agttctccat cctgcaaccg ccattcgctt gacctggctt
     1261 gcgggatttt gtcatcggca ccgacagttg ctgcttagcg aaatctaccg ccagattttc
     1321 gcctcttccg gcaccacccg gtcgctgccc agggtcgtgg ccggagtgga gatcgggcgt
     1381 gtgacggtgg acagccgcca ggtccgacct ggagatctgt ttgtcgcggt gcctggcgtc
     1441 ttcgtggatg ggcgtgactt catccccgag gctgtccgta acggtgccgt cgcggtgctg
     1501 gcaacaaacg gcacattttg gccccccgag gtgcctccgc gagccttact gacagatccg
     1561 gaaccgcgcc ggatgctggc gctgattgcg gcggttctgg caggggttcg gcccgaaacc
     1621 gtcgttgccg tcaccggaac caacggaaaa accagcgcgg ttgattttct gcgccagatc
     1681 tgggggctgg cgggctaccg cgccgcaagc gttggcactt tgggtctgat cgcgtccggc
     1741 ttcgaacccg gtcccggcct gacgacccct gatccggtct ccttggcaga aaccctgagc
     1801 agcctggcgc agaatgatat ccagcacgtg gcgatcgagg cgtcgtcaca cgggctcgat
     1861 cagttccggc tggatggtgt gcgtctcgcc gccgcgggct tcacgaacct gacgcgtgat
     1921 catctggatt atcacgtcac catggcggca taccgcgcag ccaaattgcg tctcgccggg
     1981 gcattgttgc caccgcgatc accgtttgtc gcgcactcgg acatggaccc ggtgacgttg
     2041 gaagcgttgc gcgcggtcgc catcgcccga cgcctcacgt ttcatactgt cggggaagca
     2101 gggtcgcttt tccgcgtggt tgacgcggtg ccgcgtcctg acgggcaact ggtgaccgtg
     2161 gaaatcccgg ccgaagcagg cggaactgcc tcacctgggc ggcacgaagt gctgttgaac
     2221 ctgccaggcc ggttccaggc cgataacgta ctggtcgcgg ccggccttgc ttacgttttg
     2281 ggcctggaca cggtgcttga ccttctgccg cgcctgaagg gtgttcgcgg ccgcatggaa
     2341 ttggcggcgc tattgccgaa cggtgcggcc gcctatgtcg attacgcaca cacccccgat
     2401 gcgttggaac ggctgttgtc ggcgttgcga cctcacaccg ccggcaaact gcacattgtc
     2461 ttcggcgccg gtggcgaccg agatcgcggc aagcggccgt tgatgggcga ggtggcggca
     2521 aggctggcgg accatatcat cgtcacggac gacaatcccc gcggtgaaga gcctcaggcc
     2581 attcgcgccg cagtcctggc tggttgcccc gacgcgcgcg agatcggcga ccgcgccagc
     2641 gcaatcgaag ccgcactgaa cgatctggag gcgggcgacg tgctggtcgt ggcaggcaag
     2701 ggccacgagc aaggccagac gattggcggt gtcgtttatc ctttcgacga tgtcagcgtg
     2761 atccagggat tggtcggagt gcattcgtga tgccacccga tctcccgcta tggaccgcgg
     2821 ccgaactgtt ggaggccacc ggcgggcgct tcggtgcgca attcgacgcc tcgggcgttt
     2881 cgatcgatac gcgcacgatc cagccaggcg acttgtttgt tgcgctggtc ggtgaatccg
     2941 gggatggcca cgatcatgcc ggacgcgcga tcgaggcggg cgccgccggt gtcatggtgc
     3001 atcgggaact ttctgccatt gcccaccgcc tggtcgtgga cgacacgctt gccgggctca
     3061 cacgtctcgg cgcgttcgcc cgggggcgct tcaccggacg tgtggtggcg gtgacgggca
     3121 gcgtcggaaa gaccacgacg aaggagatgt tgcgtatcgc gctctcggcg ttcggtccgg
     3181 tccatgccgc ggttgcatcc tataataatc actggggcgt gcctctgacg ctggcgcgta
     3241 ttccgcgtgc cgcggatgcc tcgtccttgc acgccgcgaa tgacgcgttc tgcgttgtgg
     3301 aaattggcat gaaccacgcg ggcgagatcg caccgctggc gcggttggcc aaaccgcacg
     3361 ttgcggtcat caccacggtg gaggcagcgc atatcggcca cctcggcagc atggcggcga
     3421 tcgccgagga gaaggcggcg atcctgcaag gcctggatgc ggcgggcgtg gcggtgttgc
     3481 ccgccgagtc accgtggttt cctctgttgc gcgatcatgc cgggaccaac cgggtgctcg
     3541 gattcggctc tgcccatggg gccgttgcgc gacttacgca catcgagcca ggtgccgact
     3601 tttccatcat cgtcgtggac gtcgccgacc gcgagttgcg gatgcgtttg aacgcgcctg
     3661 gccggcaca
//
LOCUS       DATAVD010000111         3353 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1126671, whole genome shotgun sequence.
ACCESSION   DATAVD010000111 DATAVD010000000
VERSION     DATAVD010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3353
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1126671"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..838
                     /gene="hflK"
                     /locus_tag="VHX39_01950"
     CDS             <1..838
                     /gene="hflK"
                     /locus_tag="VHX39_01950"
                     /inference="COORDINATES: protein motif:HMM:TIGR01933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HEX3989914.1"
                     /translation="PAVTRINRTEIGFRSGASGQVDAGTDNSGREMLAESLMLTGDEN
                     IIDIQFVVFWRIRPNDASKFLFNARRPSDLVFGVAESSMREVIGRTPIEPALAQLRAQ
                     IETDVMHQTQEILDRYDVGIEITEVNMGKVDRPAAVIESQIDVQRANTDAERMRNEAE
                     AYHNDIVPRARGEAARIVAEAQGVKQATVVEATGQSQRFDAVFAAYQQAKDITLRRMY
                     LDAMQNVLAHAHTLVVDDKLKGLVPFLPLEGPGSNPVTTPAQSPPGQAQTGQPQSGVS
                     TR"
     gene            835..1713
                     /locus_tag="VHX39_01955"
     CDS             835..1713
                     /locus_tag="VHX39_01955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HEX3989915.1"
                     /translation="MNRLTLPFIAFVVVLIWLVQASLFTVEQTERALVVQFGEVVRSI
                     DKPGLYVKIPLVQSVISFDKRLLAVELPGEGVILGDQRRLIVDSFTVFKITDPLSFYQ
                     AIGPDPDNIRARLNQVVTASLRQVLGRNTLLDVLSADRERIMGSIKQLVNDSMHSFGV
                     SVEDVRILRADLPAENTQAILSRMQSERQRAAAQARAEGAEASAKIRAEAERERTVIL
                     AEARATAEKTRGDGEAQATSIFAKSFGADPAFFSIWRTLQGYRDVFDAGNARLVLTPN
                     NDYLRYLQNPPAAPAH"
     gene            1839..>3353
                     /locus_tag="VHX39_01960"
     CDS             1839..>3353
                     /locus_tag="VHX39_01960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HEX3989916.1"
                     /translation="MRPLSSTARRVVRTGLCLTLALPMTALSDRSGIPFGGPGAALAR
                     GAPDGFADLAEKLLPAVVNVSSTQAVQTAKNGAPSGPEIPIFPPGSPFEQFFKDFLNH
                     GHPGQNGDTPRPERRAQSLGSGFIIDASGLVVTNNHVIEGAYEISVILQDNTTLKAEV
                     VGKDETGDLALLKVKADKPLPTVDFGDSSTARVGDWVLAIGNPFGLGGTVTAGIVSAR
                     SRDIRQGPYDDFIQTDAAINRGNSGGPLFNMDGKVIGINTAIFSPSGGSIGIGFSIPS
                     NMAKTVVMQLKQFGHPRRGWLGVRIQQVTPELAESVGLKDTAGAMVAGVTDGGPAEKS
                     NIKGGDIILKFDGQDVKDMHALPRIVAETDVGKKVQVQLWRDGKEVSVDAVLDEKPSD
                     EKLASIDTGKKAPDVPSNTRDLSDFGMQIAPITQDLKDRFQIGADQKGVVITGVKDGS
                     VAADRGLKAGDVIVEVQQAEVATPDDVTKKVEAQRAQDRKSVLMLIQGQDGVRYV"
BASE COUNT          680 a         1026 c         1059 g          588 t
ORIGIN      
        1 gcccgcggtc acccggatca accggacgga aatcggcttt cgttcgggtg ccagtggaca
       61 ggtggacgcc ggcaccgaca attccgggcg cgaaatgctc gcggaaagcc tgatgctgac
      121 cggtgatgag aacatcattg acatccagtt cgtggtattc tggcgcatcc gtcccaacga
      181 cgcttcgaag ttcctgttca acgcccgccg gccttccgat ctggtgttcg gcgtcgcgga
      241 aagttcaatg cgcgaggtga tcggccgcac cccgatcgag ccggcgctgg ctcagttgcg
      301 cgcgcagatc gaaaccgacg tgatgcatca aactcaggaa atccttgatc gttacgacgt
      361 gggtatcgaa atcaccgaag tgaatatggg taaggtcgac cgacctgcgg cggtcatcga
      421 aagccagatc gacgtgcagc gcgccaatac cgacgccgaa cggatgcgca acgaagccga
      481 agcttaccac aacgatatcg tcccgcgcgc tcgaggcgag gcggcgcgta ttgtcgctga
      541 ggcgcaaggc gtcaaacagg ccaccgtggt tgaggccacc gggcagtcgc agcgcttcga
      601 cgccgtgttt gccgcttacc agcaggcgaa ggacattacc ttacgccgca tgtatttgga
      661 tgcgatgcag aatgtcctgg cccatgcaca cactttggtc gtggacgaca agctgaaggg
      721 gctggttccg tttctgccgc ttgaaggacc agggtccaac ccggtgacca cgccggcaca
      781 atcaccgcca ggccaggctc aaacgggaca accccagtct ggagtgtcaa cgcgatgaac
      841 cgcctgactc tccccttcat tgcgttcgtc gtagttttga tctggctggt gcaggccagc
      901 ctgttcaccg tcgaacaaac cgaacgcgcc ctcgtcgtgc aattcggtga ggttgtgcgg
      961 tcgatcgata agcccggcct gtacgtgaaa attccgctgg ttcaatccgt catcagcttc
     1021 gacaagcggc tgcttgccgt cgaactcccc ggcgagggcg tcatcctggg cgatcagcgc
     1081 cggcttatcg tcgacagctt cacggtgttc aaaatcaccg atccgttgag tttctatcag
     1141 gcgatcggcc cagacccgga taacattcgc gcccggctga accaggtcgt cacagcgtca
     1201 ctgcgccagg tactgggccg caacacactg ctcgacgtgt tgtcggcgga tcgcgagcgg
     1261 atcatgggct cgatcaaaca actcgtgaac gacagcatgc acagtttcgg tgtctcggtc
     1321 gaagatgtcc ggatcctgcg tgccgacctg ccggcggaaa acactcaggc aatcctgtcg
     1381 cgcatgcagt cggaacggca acgcgccgcg gcacaggctc gcgccgaggg agcggaagca
     1441 tccgcaaaaa tccgcgccga agccgagcgg gaacgcacag tcatcctggc tgaggcgcgc
     1501 gcgaccgccg aaaagacccg cggcgacggc gaggcgcagg caaccagcat attcgcgaag
     1561 tcgtttggcg cggatcctgc attcttctcg atttggcgga ccctgcaggg ttatcgtgac
     1621 gtgttcgacg ccggcaacgc tcgccttgtc ctgacaccga acaacgatta cctgcgctat
     1681 ctgcaaaacc cgccggcggc gccggcacac tgactccgcc ggcgctgccg gcaaacttag
     1741 atcacgccgg cgctaccggc acacttggat actgctgccg acggcgagcc ctcgccccgg
     1801 aagcgaagcc cagaacattc gccaggaaca cagagaccat gcgacctctt tcctccactg
     1861 ctcgccgcgt cgttcgaacc ggtctgtgcc tgacgctcgc tttgccgatg actgcgttaa
     1921 gcgaccggtc cggtattccg tttggcgggc caggggccgc attggcccgc ggcgcacctg
     1981 acgggttcgc cgacctcgcg gagaaactgc tgcccgcggt ggtgaacgtc tcatcgaccc
     2041 aggcagtgca gaccgcgaaa aacggggcgc cgtccggacc ggagatcccg atctttccgc
     2101 ccggctcgcc gtttgagcag ttcttcaagg atttcctcaa tcacggtcac cccggtcaga
     2161 atggcgatac gccacggccc gagcggcgcg cacaaagtct cggatcaggc ttcatcatcg
     2221 acgcgtccgg ccttgtggtg accaacaacc atgtcattga gggtgcctat gaaatctcgg
     2281 tgatcctgca ggacaatacg acgctgaaag ccgaggtggt cggtaaggat gagacgggcg
     2341 acctcgcgct gctgaaggtg aaggcggaca agccgctgcc gacggttgat ttcggcgact
     2401 cgagcacggc ccgggttggc gactgggttt tggccattgg caacccgttt gggctgggtg
     2461 ggacagtcac cgccgggatc gtctcggcgc gcagtcgcga tatccggcag gggccgtacg
     2521 acgatttcat ccagaccgat gccgcgatca accgcggcaa ctcgggcggg ccgctgttca
     2581 acatggatgg caaggtcatc ggcatcaaca cggcgatctt ctcgccgtcg ggcggatcga
     2641 tcggaattgg cttctcgatc ccatcgaaca tggccaagac cgtcgtcatg cagttgaagc
     2701 agtttggtca tcctcgccgc ggctggttgg gcgtgcgcat ccagcaggtg accccggaac
     2761 tggcggagag cgtcgggctc aaggacaccg cgggtgccat ggtcgcgggc gtgaccgacg
     2821 gcgggccggc cgaaaagagc aacatcaagg gcggcgatat catcctgaag ttcgacgggc
     2881 aggacgtgaa ggatatgcac gctctgccgc gcatcgtcgc cgaaaccgac gtgggcaaaa
     2941 aagtccaggt gcagctctgg cgggacggca aggaagtgtc cgtcgacgcc gtactggatg
     3001 agaaaccgag tgacgagaaa ctggcttcga tcgacaccgg aaagaaggcg ccggacgttc
     3061 cttcgaatac ccgcgacctg tctgactttg gcatgcagat tgccccgatc acacaggacc
     3121 tcaaggatcg gttccagatc ggcgcggacc aaaagggcgt ggtcatcact ggcgtgaaag
     3181 atggcagcgt ggcggcagac cgcgggctca aggccggcga cgtgatcgtc gaagtgcagc
     3241 aggccgaggt tgcgactccg gacgacgtga ccaagaaagt cgaggcgcag cgcgcgcagg
     3301 accgcaagtc ggtgttgatg ctgatccagg gacaggacgg cgtgcgttat gtg
//
LOCUS       DATAVD010000112         8582 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_940999, whole genome shotgun sequence.
ACCESSION   DATAVD010000112 DATAVD010000000
VERSION     DATAVD010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8582
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_940999"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1282
                     /locus_tag="VHX39_01965"
     CDS             <1..1282
                     /locus_tag="VHX39_01965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HEX3989917.1"
                     /translation="AGADAADAVLVAGTSLSVARRLGQTEHVERSEGQDLGLRVFIGK
                     KAAIVSATSIDPAGFSELAERAVAMAKVVPEDPYTGLAETAAPPDTQNLDMVDPAEPS
                     TEDLIARAAAAEDAALAVPGITNSEGADAGFSRGEIFLVTSAGFAGHRVGSSHSISAT
                     ALAGEGTGMQRDYDYDSKVYLSDLDDPAAIGRSAAHRTLERLNPIRPKTAKLPVLYDP
                     RVATSLLGSLMGAINGASVARGTSFLKEKLGQKIFASGIFVHDDPRRVRGPRSRVFDG
                     EGTPTKARALIEDGVLTTWLLDSRSARQLGMTSTGHASRGTSGPPSPAPSNLWLAAGT
                     LTPEELMADIKLGLYITEMMGGGVNGVTGDYSRGASGFLIRDGKLAEPVAEITVAGHA
                     LEMFASLTPANNLVFRRGTDSPTIRVEGLTMAGA"
     gene            1364..2299
                     /locus_tag="VHX39_01970"
     CDS             1364..2299
                     /locus_tag="VHX39_01970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007399213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM44-like domain-containing protein"
                     /protein_id="HEX3989918.1"
                     /translation="MVGLRSRVLAAAAVVGLLLAPAMADARLGGGSSMGSRGSMTFSA
                     PPSTRTAPGYAAPMQRTLTPNSPTPGYGSMPVYGQRSPFASGLMGGLLGAGLFGLLFS
                     GSFFGHGMGFGGFLGFLLQIFLIVMIGRFLWRRFMGGQSVFAGGPGLYARGGAPSGMM
                     GGMPGAGPSPVRQSGGPPVAITQADFQEFEQLLQASQAAWSAGDLNALRGMATPEMVG
                     YFSEQLSDLASRGVTNTVTDVRLESGDLAQAWAEAGREYATVAMRFSMIDVTRDSGGR
                     VVDGSVAERVLVTEVWTFVRARGGHWILSAIQQAR"
     gene            2384..4189
                     /locus_tag="VHX39_01975"
     CDS             2384..4189
                     /locus_tag="VHX39_01975"
                     /EC_number="2.5.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014415667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase"
                     /protein_id="HEX3989919.1"
                     /translation="MSALDPIPYTDAKLRRILSTVRTIAMVGASSNWNRPSYFVMKYL
                     QGKGYRVIPVNPGTAGQQQLGEKIYASLRDIPEKIDMVDIFRASDQVGPIVDDAIAIG
                     AKVVWMQLGVRNDAAAEKAEAAGIEVIMNRCPKIEFGRLGGELSWSGVNSGIIRNRAP
                     EPPTQRSTRPHPLPQTNVSYGFETRAIHAGASPDPTTGARSTPIFQTTAYVFDDVEHA
                     ASLFNLHNFGYIYTRLNNPTVSVLEERIASLEGGRAAVAAATGHAAQFLVFATMLEPG
                     DEFLASRALYGGSLTQFGLSFKKLGWHCHFVDPLDPENFRRALTPKCKAIFVESLANP
                     GGVVVDLAAIADIAHSVGIPLIVDNTLASPYLCRPIEWGADLVTHSTTKFLGGHGNSM
                     GGMVVESGKFDWAASGKFPSLTEPEPAYHGLRFYENFGDFAFTTKARAVALRDYGPTM
                     APMNAFLTITGTETLHVRMERHCENAQKVAEFLDGHDKVAWVSYAGLETSPYRALARK
                     YMPKGAGSVFTFGIKGGFDAGVKLVENVGIFSHLANIGDTRSLILHPASTTHRQLTDE
                     QRQAAGAGSDVIRLSIGLETASDLIADLDQALAAA"
     gene            complement(4202..5107)
                     /locus_tag="VHX39_01980"
     CDS             complement(4202..5107)
                     /locus_tag="VHX39_01980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010665861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEX3989920.1"
                     /translation="MDSRRHPKGFAWMVIVFNPVAGRRRAHLLWRVLDVLVANGVRLE
                     LAETCRAGHAESLTLEAVKRGEPMVVAAGGDGTIAEVANGLMGTGARLGVIPLGTANV
                     LAHELGLPFSPKAVAAALAFGRTTTLWPGLATSTHGDRLFVQMLGVGFDAHVVKQVSF
                     PMKKLLGKGAYVLRSMAELTRYSYPPIRLRVDEVETQAASVIVSKGKFYGGRFRLATD
                     AVPSAPGFSVIMFDRGGPGAAMMYGAALPLNLMAHAPGVRRVRADRVDFISNEPVPAQ
                     TDGDPFGCGVTSVTNARAPVQVVVG"
     gene            5291..6100
                     /locus_tag="VHX39_01985"
     CDS             5291..6100
                     /locus_tag="VHX39_01985"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEX3989921.1"
                     /translation="MSGFGARTEYRSIFISDTHLGTRGCRCDFLADFLRRTSAQNLFL
                     VGDIIDGWRLRKSWYWDEHHDDVVRQIFCQARGGTKVTFIPGNHDEMFRCWLPADVDV
                     SGIRMCLEAEHITADGKRLLIIHGDEFDNVVRYAKFLALLGDWAYTTALVVNRWFNAI
                     RRRLGMPYWSLSAWLKLQVKEAVKAIDRFESALAAEAHRRGFDGVVCGHIHHAEMREV
                     DGIMYMNDGDWVESCTALVEHHDGRMELLDWAALNRLSFFEPRQTRVAQTA"
     gene            6129..7163
                     /locus_tag="VHX39_01990"
     CDS             6129..7163
                     /locus_tag="VHX39_01990"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008495137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEX3989922.1"
                     /translation="MLPDAPSHRILIVTDAWHPQVNGVVRTMTTIVNELQAMGHVVEV
                     IGPDRFRTIPCPTYPDIALSLFPRRKLVRMIEAFQPEALHISTEGPLGLAARSWARRT
                     GFRFTTAFHTRFAEYLQARTRIPVRPVYAWMRRFHDAGAGTMVATQSLRDELTARGFS
                     HIRPWSRGVDLELFKPEPREDWQLPRPVFLYVGRVAVEKNIGAFLDLALPGSKVVVGG
                     GPQLASLRRDYPAVTFTGPRYGEDLARAYAGADVFVFPSLTDTFGLVILESLACGTPV
                     AAFPVTGPKDVLAGAVGCIGAVNTDLRQAALTALHGDREACRAHAERHSWRACAELFL
                     SHLTPMREAS"
     gene            7242..7982
                     /locus_tag="VHX39_01995"
     CDS             7242..7982
                     /locus_tag="VHX39_01995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit A"
                     /protein_id="HEX3989923.1"
                     /translation="MAAKSKVVHSFREAVADIPDGSTIAFGGFAMPGVPYNLIQALLE
                     QGAKRLTLVGNTTGGAQQPRMPDMGMLVENGQVAKVICAFTAATRPTDTLPFTKYYES
                     GECDAELVPQGTLAERLRAAGAGIPAFYTPTAVGTELAEGRETRVINGREYLLEYALP
                     LDYAFIRAHRADDFGNLQFHRAQRNFNPVMATAARCTIVEVDEPIVSCGEIDADAVHC
                     SGLFVQRLVRVPPPPEGLWPTKRQERRR"
     gene            7979..>8582
                     /locus_tag="VHX39_02000"
     CDS             7979..>8582
                     /locus_tag="VHX39_02000"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF013323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEX3989924.1"
                     /translation="MSGTKGINRQQMADLIARQFQDGWVVNLGVGIPTMCSNTDIGDT
                     DIVYHSENGVIGYGPVAAEGHEDLNLVNAGGQNVTLKPGAAVVHHADSFAIIRGGHID
                     VTVMGAYQVSSRGDFANWKLKGQKGGGIGGAMDLAACAKRVFIILEHTTRDGSSRLVP
                     LCDLPVTARGVVKLVATNYGLFEPTGDGFHLREIAPGLTVD"
BASE COUNT         1525 a         2764 c         2667 g         1626 t
ORIGIN      
        1 cgccggagca gatgccgccg atgccgtgct ggtcgccggc acatccctct cggtcgctcg
       61 ccggctcggc cagaccgagc atgtcgagcg atcggaaggc caggaccttg gcctacgcgt
      121 gttcatcggc aagaaagccg ccatcgtttc cgccacctcc atcgatcccg ccggtttttc
      181 cgaactggcc gagcgggctg tcgccatggc caaagtcgtc cccgaggacc cgtataccgg
      241 ccttgccgaa accgccgcgc cgccggacac ccagaacctc gacatggtgg acccggcgga
      301 accctcgacc gaggacctga tcgcccgcgc cgccgccgcg gaggacgctg cgctcgccgt
      361 gccaggcatc accaactccg agggcgccga tgccgggttc agtcgcggcg agatctttct
      421 ggtgacctca gccgggtttg ctggccatcg tgtcggctcc agccattcga tcagcgccac
      481 cgcattggcg ggcgagggca ccggcatgca gcgcgactac gactacgatt ccaaggtgta
      541 tctgtccgat ctcgatgacc cggccgcgat cggccgcagc gccgcacacc ggacgttgga
      601 gcggctcaac ccgatacgcc cgaaaaccgc caaattgccg gtgctgtacg atcccagggt
      661 cgcgacctcg ttgctcggca gcctgatggg cgcgatcaac ggcgcctcgg tcgcccgcgg
      721 caccagtttc ctcaaggaga aactgggcca gaagatcttt gcctcgggca ttttcgtgca
      781 tgacgatccg cgccgcgtgc gaggcccacg ctcccgcgtg ttcgacggcg aaggcacgcc
      841 gaccaaagcc cgtgcgttga tcgaggacgg cgtgctgacc acctggctgc tcgacagccg
      901 ctcggcgcgt caacttggca tgacatcgac cgggcacgcg tcgcgtggca ccagcgggcc
      961 gccgtcgccc gcgccgtcca atctgtggct cgccgccggc acgttgacgc ccgaggaact
     1021 gatggccgac atcaaactcg gcctctacat caccgagatg atgggcggcg gtgtgaacgg
     1081 cgtgaccggc gattacagcc ggggtgcgtc ggggtttctc attcgcgacg gcaagctggc
     1141 cgagccggtg gcggaaatta ccgtcgccgg ccacgcgctg gagatgttcg ccagcctcac
     1201 cccggccaat aatctggtgt tccgccgcgg caccgactcg ccgacgatcc gcgtcgaagg
     1261 gctgaccatg gccggcgcct gacgcatacc gctggcgccc ctcttgcggg cgatcggtga
     1321 gaccaccaaa tagcgaacgt ttccataaca aagcgataag tcgatggttg gtctgcgttc
     1381 acgagttctg gccgccgctg cggtggttgg gttgctgctg gcgcccgcga tggcagacgc
     1441 acgccttggc ggcgggagtt cgatgggcag ccgaggcagc atgaccttct ctgcgccgcc
     1501 gtcgacccgc acagcaccag ggtacgcggc gcccatgcag cgcactctga caccgaattc
     1561 gccaacgcca ggctatggca gcatgccggt gtatggccag cgctcgccgt tcgcgtcggg
     1621 gctgatgggc ggacttttgg gtgccgggct cttcggcctg ctgtttagtg gcagcttctt
     1681 cggccatggc atgggctttg gcggtttcct cggattcctg ctgcagattt tcctgatcgt
     1741 aatgatcggc cgctttctgt ggcggcggtt catgggcggc cagtcggtgt tcgccggcgg
     1801 tcccggcctg tatgcgcgag gcggtgcgcc cagcggtatg atgggcggca tgccgggcgc
     1861 cggcccgtcg ccggtacggc agtccggcgg gccgcccgtc gcgatcaccc aggccgactt
     1921 ccaggagttc gagcaactgc tgcaagcctc ccaggcggcc tggagcgccg gtgacctgaa
     1981 cgctctgcgc ggcatggcaa cgcccgagat ggtcggctac ttctccgagc aactctccga
     2041 tctcgcgagc cgaggggtga ccaacaccgt caccgatgtt cgcctcgagt ccggcgatct
     2101 ggcgcaggcc tgggccgaag cggggaggga gtatgcgaca gtcgccatgc ggttctccat
     2161 gatcgatgtg acccgcgaca gtggcggacg tgtggtggac ggcagcgtcg ccgaacgcgt
     2221 gctggtgacc gaggtctgga ctttcgtgcg ggcacgcggc gggcattgga tcctgtcggc
     2281 gattcagcag gcgaggtagg tttcagcgtt cggttctgtc gcgccgccgt tgccattggc
     2341 ctgcccgggc gataactgca tgcccgcagc aatggagcgc gaaatgtccg ccctcgaccc
     2401 cattccttac accgatgcca aattgcgccg cattctctcg accgtgcgca ccattgccat
     2461 ggtcggtgcc agctccaact ggaaccggcc gagctatttc gtgatgaagt acctgcaagg
     2521 caaaggctac cgcgtcatcc cggtcaaccc cggcaccgcc ggccagcagc aactgggcga
     2581 aaagatttat gcgtcgctgc gcgatatccc cgaaaagatc gacatggtcg atattttccg
     2641 cgcctccgac caggtcggcc cgatcgttga cgacgccatc gccatcggtg ccaaagtggt
     2701 ttggatgcag ctgggtgtcc gtaacgacgc tgccgccgaa aaagccgagg cagccggcat
     2761 tgaagtcatc atgaatcgct gccccaaaat tgaattcggc cgcttgggcg gggaactgtc
     2821 gtggagcgga gtcaactccg gcatcatccg caatcgcgcg cccgagccgc cgacgcaacg
     2881 cagtacccgt ccacacccgt tgccgcaaac gaacgtgagc tacgggttcg aaacgcgggc
     2941 cattcacgcc ggagcctcac ccgatcccac cacgggtgca cggtcgacgc cgattttcca
     3001 gaccacggct tatgttttcg acgatgtcga gcacgctgcc tcgttattca acctgcacaa
     3061 ttttggttac atttacacgc gtctgaacaa tccgaccgtg tcggtgctgg aggaacgcat
     3121 cgccagcctg gagggtggcc gcgctgccgt cgccgccgcc accggtcacg ccgcgcagtt
     3181 cctggtgttc gcgacgatgc tggaaccggg ggacgaattc ctcgcctcac gcgcgctgta
     3241 tggcggatcg ctgacccagt ttggattgag ctttaaaaag cttggctggc actgccattt
     3301 cgtcgatccg ctggacccgg aaaatttccg ccgcgcgctg acgccaaagt gcaaggcgat
     3361 ctttgtcgaa agcctcgcga acccgggagg cgtcgtcgtc gatctcgccg caatcgcgga
     3421 cattgcccat tcggtgggaa ttccgttgat cgtggataat acgttggcct cgccctatct
     3481 gtgccgcccg atcgagtggg gtgccgatct ggtcacccac tccaccacga agttccttgg
     3541 cgggcacggc aattcgatgg gcggcatggt ggtggaatcc ggcaagttcg attgggcggc
     3601 atccggaaaa ttcccgtcat tgaccgaacc ggagccggcc tatcacggcc tgcggttcta
     3661 cgagaatttt ggcgatttcg cgttcaccac gaaagcccgg gcagtcgcgt tgcgcgatta
     3721 cggtccgacg atggcgccga tgaacgcgtt cctgaccatc acaggcaccg aaacattgca
     3781 cgtccgcatg gagcggcatt gcgagaacgc gcaaaaagtc gccgagttcc tggacgggca
     3841 cgacaaggtc gcctgggtat cgtacgccgg tcttgaaacg agtccgtatc gggcgttggc
     3901 gcggaaatac atgccaaagg gcgccgggtc ggtgttcact ttcggcatca aaggcggttt
     3961 cgatgccggt gtgaaattgg ttgagaatgt cgggatattt tcgcacctcg caaatatcgg
     4021 ggatacccgc agtttgattc tgcatccggc ctcaaccacg caccggcagt taaccgacga
     4081 acaacggcag gcggccggtg ccgggtctga tgtcatcagg ttgtctatcg ggttggagac
     4141 ggcgtcggat ctgatcgccg atctggatca ggcactggcg gcggcgtaac ctcgctgcct
     4201 tctaccccac taccacctgg accggcgccc gtgcattggt cacggacgtc acgccgcagc
     4261 cgaacggatc gccatcagtc tgtgccggca ccggctcgtt gctgatgaaa tcaacgcgat
     4321 cggcccgcac ccggcgcacg cccggcgcat gtgccataag gttcaacggc aacgctgcgc
     4381 cgtacatcat cgccgcgccc ggcccgccgc gatcgaacat gatgaccgaa aatcccggcg
     4441 cactcggaac ggcatcggtc gccagacgga aacgtccgcc gtaaaacttg ccttttgaca
     4501 cgatcacgct cgccgcctgc gtctccactt catcgacccg aagcctgatc ggcgggtagg
     4561 aataccgggt cagctccgcc atcgaacgca aaacgtaagc gcccttgccg agcaatttct
     4621 tcatcggaaa cgacacctgc ttcacgacat gcgcatcgaa cccaacgccc agcatctgga
     4681 cgaacaaacg gtcgccgtgc gttgaggtgg cgaggccggg ccacaaggtc gtcgtgcgac
     4741 caaacgccag tgccgccgcc accgcctttg gcgaaaacgg caaccccagc tcatgcgcca
     4801 gcacattggc ggtgcccaac ggtatgaccc caagccgcgc cccggttccc ataagaccgt
     4861 tggcgacctc ggcaatcgtg ccgtccccac cggctgcgac gaccatcggc tcgccgcgct
     4921 tcaccgcctc caacgtcagc gattcggcat ggcccgcgcg gcaggtctcg gcgagttcca
     4981 accgcacgcc gtttgccacc aacacatcca gcacgcgcca caacaaatgc gcgcgccgtc
     5041 gtccggcgac cggattgaac acgatgacca tccaggcgaa gcctttcggg tgccggcgcg
     5101 aatccaaccg ccggattcaa cataaggttg cgtcgatgcc agggctgcgc gtcgatttca
     5161 tgatggttcc atgacaaatc catgactttg caatgccgtg tggattttac ggctcgtcat
     5221 cgaatcttca ctgacgcaac gcaagccggg cggtatgtgc tccacattaa tgaacgcgcc
     5281 cctcctcccg atgtctggat tcggtgcccg caccgagtac cggagcatct tcatctccga
     5341 cacccattta gggaccaggg gatgccgctg cgatttcctc gctgattttc tccgtcgcac
     5401 cagcgcgcaa aatttgtttc tggttggtga catcatcgac gggtggcggc tgcggaaatc
     5461 gtggtactgg gatgaacatc acgacgatgt ggtgcggcag attttttgtc aggcccgcgg
     5521 tggcacgaag gtcaccttca ttcccggcaa ccatgatgaa atgtttcgct gctggttgcc
     5581 ggccgatgtc gatgtcagcg gcatccgcat gtgcctggag gccgagcata tcaccgccga
     5641 tggcaagcgc ctgttgatca tccacggcga cgagttcgac aatgtcgtcc gctatgccaa
     5701 attcctcgct ctgctcggcg actgggctta cactaccgcg ctggtggtca atcgctggtt
     5761 caatgccatc cgccgccggt tggggatgcc gtattggtcg ctgtcggcgt ggttgaaact
     5821 gcaggtgaag gaagccgtga aagcgatcga ccgttttgaa tcggcactgg ctgccgaggc
     5881 gcatcgccgc ggcttcgatg gcgttgtctg cggtcacatc catcacgccg aaatgcgcga
     5941 ggtcgacggc atcatgtaca tgaacgacgg cgactgggtc gaaagctgca ccgctctcgt
     6001 cgagcaccac gacggccgca tggaactgct cgactgggct gccctgaacc ggctgtcgtt
     6061 cttcgagccg cgccagaccc gggtcgcaca aactgcctga cctgaccccg ctcgcaaatc
     6121 gcatcgcgat gttacctgat gctccttcgc accgcatcct gatcgtcact gacgcctggc
     6181 atcctcaggt caacggcgta gtgcgcacga tgaccacgat cgtgaatgag ttgcaggcga
     6241 tggggcacgt cgtcgaggtg atcggtccgg atcgcttccg caccattcct tgcccgacct
     6301 acccggacat tgcgctgtcg cttttcccca ggcgcaagct ggtgcggatg atcgaggcgt
     6361 ttcagccgga agcgctgcat atctccaccg agggcccact tggccttgct gcccgcagtt
     6421 gggcgcgacg caccgggttt cgcttcacca ctgcgttcca tacaaggttt gccgaatacc
     6481 tgcaggcccg aacccgcatt ccggtgcgcc cggtctatgc ctggatgcgc cggtttcatg
     6541 atgccggagc tggcacgatg gtcgcgaccc agtcgttgcg cgacgaacta accgcgcgtg
     6601 ggttcagcca tatccggccc tggtcgcgcg gtgtcgacct ggagctgttc aagcccgagc
     6661 ctcgggaaga ctggcagtta cccagaccgg tgttccttta tgtcggccgg gttgcagtgg
     6721 agaaaaatat tggcgccttc ctcgatcttg cgttgccagg ctccaaggtc gtcgtgggcg
     6781 gtggcccgca gttggcctcg ctgcgccggg attatcctgc cgtcaccttc accggcccgc
     6841 ggtatggcga ggatttggcg cgtgcttacg ccggcgccga tgtatttgtc ttccccagcc
     6901 tgaccgatac gttcggcctt gtgattctcg aatcgctggc ctgtgggacg ccggtcgcgg
     6961 catttccggt gaccggtccc aaggacgtgc tggctggggc tgtgggttgc atcggcgcgg
     7021 tgaacactga tctgcgtcag gccgcgctga cggctctgca cggggaccgt gaggcctgcc
     7081 gggcccatgc cgaacgccat tcctggcgcg cctgcgcgga actgtttctg tcgcatctga
     7141 caccgatgcg ggaggcgtcg tagggtcgca aagcccaggc gctgcttgac tccccgtgcg
     7201 cggtgcccat tgatcgggcc tgaacacgac gcgaggaaac gatggccgcg aaatccaaag
     7261 tggtccacag cttccgggag gcggtggccg acattcctga cggcagcact atcgcctttg
     7321 gcggtttcgc catgcccggg gtcccgtaca acttgatcca ggcgctgctg gaacaagggg
     7381 cgaaacgtct gaccctggtt ggcaatacca ccggcggcgc gcaacaaccg cgcatgccgg
     7441 acatgggaat gctggtggag aatggacagg tcgccaaagt catttgcgcg ttcaccgccg
     7501 cgacgcgccc aaccgatacg ctgccgttca caaaatatta cgagtccggt gagtgcgacg
     7561 ccgaacttgt tccccaaggc accctggccg aacgtctgcg tgccgccggt gccggtattc
     7621 cggcgtttta cacaccgaca gccgttggca ccgaactcgc cgagggccgc gaaacccgcg
     7681 tgatcaacgg ccgcgagtac ttgctggaat acgctctgcc gctggattac gcgttcattc
     7741 gcgcgcatcg cgccgacgac ttcggcaacc tgcaattcca ccgcgcgcaa cgcaacttca
     7801 atccggtgat ggccaccgct gcgcggtgca caatcgtcga ggtcgacgaa ccaattgtgt
     7861 cctgcggcga gatcgatgcc gatgcggtcc attgttccgg tctgttcgtg caacggctgg
     7921 tgcgtgtgcc gccgccaccc gagggcctgt ggcctaccaa acggcaggag cgacgccgat
     7981 gagcggaacc aaaggcatca accgccagca gatggccgac ctgatcgcgc ggcagttcca
     8041 ggatggctgg gttgtcaatc tgggcgtcgg cattccgacc atgtgctcga ataccgatat
     8101 cggcgatacg gatattgtct accattcgga aaatggcgtc atcggttatg gaccggtggc
     8161 ggccgagggg cacgaggatt tgaatctcgt caacgccggc ggccagaacg tgacgcttaa
     8221 accgggtgct gccgtggtgc atcacgccga tagttttgcg atcatccgag gcggccacat
     8281 cgatgtgacg gtgatgggcg cgtatcaggt gtccagccgc ggcgacttcg ccaactggaa
     8341 attgaaggga cagaaaggtg gcggcattgg cggggcgatg gacctcgccg cctgcgccaa
     8401 acgggtgttc atcattctgg agcacaccac ccgcgacggt tcgtcgcgtc tggtcccgct
     8461 ttgcgatctg ccggtgaccg cccgcggcgt ggtgaaactt gttgccacga actatggttt
     8521 gttcgaacca accggtgacg gtttccacct gcgtgagatc gctccgggcc tgacagttga
     8581 tg
//
LOCUS       DATAVD010000113         3959 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3174381, whole genome shotgun sequence.
ACCESSION   DATAVD010000113 DATAVD010000000
VERSION     DATAVD010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3959
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3174381"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            69..299
                     /locus_tag="VHX39_02005"
     CDS             69..299
                     /locus_tag="VHX39_02005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989925.1"
                     /translation="MGARGWLNRMINRGDIVYLGLASGVIGSLVGGMLLGIGMTLIIG
                     GAPIGWLLLLPAAPAGGIPGWLLAKRLAQKLP"
     gene            314..1297
                     /locus_tag="VHX39_02010"
     CDS             314..1297
                     /locus_tag="VHX39_02010"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3989926.1"
                     /translation="MKFGITLANRGVLLGLTTVPRLLALADAIDACPLLDSIWVGDAL
                     FVNQRLDALTLLGAIAGRTSRVKLGPSCMATFALRDPRVFAYEWASLDVISGGRTVLS
                     VCAGGGSPTAWNAETEAMGIPANERRKRMIENIAVLRHLWTTNDVPFEGTYLRFPGVT
                     MLPKPVQSPCPIWLTTNAGRLENTQIGAGGSDFALRRVGRVADGWMTHSVTPEGFRRS
                     LDVIEDTGRASGREMGGFGNIITAVLNIQDDAGAAMADAKRYLDLYYGADYSPERLHA
                     WGPIGTPASCAEWISRFRGTGCQGFTFRLATNGDAMAQLRRLTEEVLPQVA"
     gene            1508..2497
                     /locus_tag="VHX39_02015"
     CDS             1508..2497
                     /locus_tag="VHX39_02015"
                     /inference="COORDINATES: protein motif:HMM:NF015763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989927.1"
                     /translation="MISRAARGPIAASMILLIGANILIWVWAVHAFGERPELVGTALL
                     AWVFGLRHAVDSDHIAAIDNVVRKLVHNRCRAWDSGLFFALGHSTTVLGLCLCVIAFP
                     SVHGIGGLRDLADAWGTLFSAGFLLLIGIVNLVALQRLWRARRGGAPGQPAVGGVTSR
                     ILRPVQRLVGKPWHMLPVGFLFGLGFDTASEVALLVLTAQQAAAGLSASDVLVFPALF
                     AAGMVLIDTADSAVMTGAYGWALREPRRKLNYNIAVTAVSVGVAIGVGGIELIGLLAE
                     HAQSAIAQLPWLGRVLEAISFTGSYLGFVVVAGLLVLWGIAAVVARLRPNVAE"
     gene            complement(2548..3669)
                     /locus_tag="VHX39_02020"
     CDS             complement(2548..3669)
                     /locus_tag="VHX39_02020"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3989928.1"
                     /translation="MTKQRPPRAISSMCLSSAARNVRWRFPKPRAPSLAASRSERFGQ
                     QIERATATSHRSSTARKRAGAAVMTWEPALIVLCTFVVMALCGVVVTAGLLMSRPVQN
                     DVGPAPPVLAGAEAVRIPSRSGTVLSGWWINGEPGGGCIVLMHGVRRNRLTMARRAEL
                     LHGWGFSVLLFDFQAHGASPGRSITFGYLEALDANAAISFARHRLPAERLGVIGVSLG
                     GAAALLGPAPPQVDALVLESVFPDLRSALINRLHIYLGPVWGKALAPILAPMFRLLMW
                     AVLGVRSATLRPIDHIAGVTAPVLIASGTRDRSTTIEEARTLFHHATEPKQFWAVEGA
                     GHVNLERFNPAAYWRVVLPFITQYVQSEIQPVANQSVGT"
     gene            complement(3551..>3959)
                     /locus_tag="VHX39_02025"
     CDS             complement(3551..>3959)
                     /locus_tag="VHX39_02025"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004273232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEX3989929.1"
                     /translation="ADYRWFHAITTRWMDNDVFQHVNNVNYFSYFDTAVTYYEMSEQV
                     VGLLDGPTHCVVAEVACRYHSSLAFPDRVAVGIRVAQLGRSSVRYEIGVFRNDDETAA
                     AEGHFVHVFVERGSQRPVAIPEAARAILGRITV"
BASE COUNT          680 a         1216 c         1301 g          762 t
ORIGIN      
        1 gcggctttta agggggaggc gggcggattg tcaaactttg ccgccccgga gggtcgctat
       61 tgtcaaacgt gggcgcccgt ggctggctca accgcatgat caatcgcggc gacattgttt
      121 acctggggct tgcctccggg gtcatcggtt cccttgtcgg cggcatgctt ctgggcattg
      181 gcatgacgct gatcatcggc ggggcgccca ttggctggct gcttctgctg cccgcggcac
      241 cggccggagg catccccgga tggctgctgg ccaaacggct tgcgcaaaaa ttgccatgat
      301 ccgggagaca ggcatgaaat tcggcatcac gttggccaac cgaggtgtcc tgctcggcct
      361 gaccaccgtc cccagattgc tggcgctggc cgacgccatc gacgcctgcc cactgctgga
      421 cagtatctgg gtcggggacg cgctgttcgt gaaccagcgc ctcgacgcgc tcaccttgct
      481 tggcgccatc gccggccgca ccagccgggt caaactgggc cccagttgca tggcgacctt
      541 cgcgctgcgc gaccccaggg tgttcgctta tgagtgggcc tcgctggacg tcatctcggg
      601 tggccgtacc gtcctgtcgg tctgtgccgg gggcggctcg cccaccgcct ggaacgccga
      661 gaccgaggca atgggcattc cggccaacga gcgccgcaag cggatgatcg agaacattgc
      721 cgtgctgcgg catctgtgga ccaccaacga tgtgccgttc gagggcacct atctgcgctt
      781 tcccggcgtg accatgctgc caaagccggt gcagtcgccg tgcccgatct ggctgaccac
      841 caacgccgga cggttggaga acactcagat cggcgccggc ggttcggact tcgctctgcg
      901 ccgcgtgggg cgtgtggcgg atggctggat gacccattcg gttactcccg aagggttccg
      961 ccgatcgctg gacgtgatcg aggacaccgg tcgcgcgtcc gggcgggaga tgggcggttt
     1021 cggcaacatc atcaccgccg tgctaaacat tcaggacgat gcgggcgctg cgatggcgga
     1081 tgcgaaacgc tatctcgatc tttattacgg tgccgattat tcgccggagc ggttgcacgc
     1141 ctggggcccg atcggtacgc ctgcatcctg tgccgaatgg atcagccggt tccgcgggac
     1201 cggctgtcag ggcttcacct tccggctcgc gaccaacggc gacgcgatgg cccagttgcg
     1261 gcggctgacc gaggaggtgc tgccgcaagt cgcgtgaacc tgttgcatgc gcgatggcga
     1321 tgccgggtgg ctaatcgcct gggggacaac cacggtcctt gcgataagcg gcgtccggca
     1381 tccagagccc ggacgcgacg cagttcgtcg ttgcttcccc gccgcattgg caacccgttg
     1441 gacacgcggc cctgcctgag caacgatagt gcaggttgaa ccgaataacc gcgagcgatc
     1501 cgccccaatg atctcccgag ccgcacgcgg accaatcgcc gccagcatga tcctgctcat
     1561 cggcgccaac atcctgatct gggtttgggc ggttcacgca ttcggcgaac gcccggagtt
     1621 ggtgggtact gccttgctcg cctgggtgtt cggcttacgg cacgcagtcg actccgatca
     1681 catcgcggcg atcgacaatg tggtgcgcaa actggtgcat aaccgttgcc gggcctggga
     1741 cagcgggttg tttttcgcgc ttggccactc caccacggtg cttggcttat gtttgtgcgt
     1801 tatcgcgttc ccatcggtgc acgggatcgg cggcctgcgt gacctcgcgg acgcatgggg
     1861 cacgctgttc tccgccgggt tcctgctgct gatcggcatt gtgaacctgg tcgccttgca
     1921 gcgtctctgg cgcgcgcgac gaggtggcgc accgggccaa ccagcggtcg gtggggtcac
     1981 aagtcgaata cttcgaccgg tccagcggct cgtcgggaag ccctggcata tgctgccggt
     2041 cggcttcctg ttcggcctgg ggttcgatac cgcaagcgag gtcgcgttgc tggtgttgac
     2101 cgcgcagcag gcagcggccg gcctttcggc ctcggatgtg ctggtgtttc cggcgctgtt
     2161 cgccgccggc atggtgttga tcgacaccgc cgacagtgcg gtgatgacgg gagcctacgg
     2221 ttgggcgttg cgtgagccgc gtcgtaagct gaactacaat atcgcggtga ccgctgtttc
     2281 ggtcggtgtg gcgattggcg tcggcggtat cgaattgatc gggctgctgg cggaacacgc
     2341 gcagagtgca atcgctcaac tgccgtggct cggtcgcgtg ctggaggcga tctcctttac
     2401 cgggtcctac ctcggatttg tcgtggtggc gggtttgctg gtgctgtggg gcatcgctgc
     2461 ggtcgtcgcg cggttgcggc ccaatgtcgc ggaataagtt tgtcgccgaa tgaggtcatc
     2521 cccgggctgc agcgtcccaa tcaggcgtta tgtgccgacg gattggttcg cgacaggttg
     2581 aatttcggac tgaacgtatt gcgtgataaa cggtaagacg acgcgccagt acgcagccgg
     2641 attaaagcgt tcgagattga cgtggccggc gccttcaacg gcccagaatt gttttggttc
     2701 ggtggcgtgg tggaatagtg tccgggcttc ctcgatcgtc gtggatcggt cgcgcgtgcc
     2761 ggaggctatc aataccggtg ccgtcacgcc ggcaatatga tcgatgggcc gcagtgtggc
     2821 ggagcgaact ccaagcacgg cccacatcag taacctgaac attggtgcca ggattggcgc
     2881 gagtgctttg ccccagaccg ggccgagata aatgtgaaga cgattgatca acgcgctacg
     2941 gagatcggga aacaccgact ccaacaccaa tgcgtcgacc tgtggtggtg caggtccgag
     3001 cagcgccgct gcacctccga gcgagacgcc gataacgccc aatcgctcgg cgggaagccg
     3061 gtggcgagcg aagctgatgg cggcgttcgc gtccaacgcc tcgagatatc caaacgtgat
     3121 cgaccgtcct gggctggcgc cgtgcgcctg aaagtcgaac agcagaacgg agaaacccca
     3181 tccatgcagc aactccgccc gccgagccat agttaggcga ttccggcgga cgccatgcat
     3241 caggacaatg cacccgcctc ccggctcgcc attgatccac catccactca ggactgtgcc
     3301 ggatctggac gggatccgaa cggcttcagc gccggccaga acgggcgggg cggggccgac
     3361 atcattttgc acaggtcgag acatcagcag gccggctgtg accaccacac cgcacagagc
     3421 catcacaacg aatgtgcaca aaacgatcag tgcaggttcc catgtcatga cggcagcgcc
     3481 ggcgcgtttc cgtgcggtcg atgaccggtg ggatgttgct gtcgctctct caatctgttg
     3541 gccgaaccgc tcagaccgtg atgcggccaa ggatggcgcg cgcggcttcg ggaatcgcca
     3601 ccggacgttg cgagccgcgc tcgacaaaca catggacgaa atggccctcg gcggccgctg
     3661 tttcgtcatc gttgcggaac acaccgatct cgtagcgcac cgaactgcgc ccaagctgcg
     3721 ccaccctgat gccaaccgcg acccggtccg gaaacgcgag cgaactatga taccgacacg
     3781 cgacctcggc caccacgcag tgcgtcgggc catccagcag cccaacgacc tgttcgctca
     3841 tctcgtaata agtgaccgca gtgtcgaaat atgaaaagta attcacgttg ttgacgtgct
     3901 ggaacacgtc gttgtccatc cagcgggtgg tgatggcatg aaaccagcga tagtcggcg
//
LOCUS       DATAVD010000114         3321 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3174386, whole genome shotgun sequence.
ACCESSION   DATAVD010000114 DATAVD010000000
VERSION     DATAVD010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3321
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3174386"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1206)
                     /locus_tag="VHX39_02030"
     CDS             complement(<1..1206)
                     /locus_tag="VHX39_02030"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX3989930.1"
                     /translation="MLQADSPITDGVFDAIDAGLIIVDAERRVLGWNQWMEASTGIPA
                     NAADRRILEAIFPGLTKSRLIGSITDAVASGVSGVLTHTLNPGLLPLRTRDGRPMIHN
                     VLVRPIARAPALVLIQVTDVTVATERDRVLRERQNARYDAVVESAPDAILTLSSDGII
                     QLANPAAARQFGYASRELTGVPITELLHDSAAWEAVWAAVARGVPLDRPVDLIARRKD
                     GSATFLEISASGWQSDQRIFVTAILRDVNERRAAEQALRQLNQTLEQRVAERTAERDR
                     MWRLSTDVMLVAHLDGTIISVNPAWQSQLGWDEATLVGVKLAEFVVPADCARLQVTLG
                     ELAARRTARLFEVRMPGRDGAVRQIAWNAVVADDVLQAVGRDVTAERRAQGDLAKAED
                     ALRQSQKMEA"
     gene            complement(1193..1846)
                     /locus_tag="VHX39_02035"
     CDS             complement(1193..1846)
                     /locus_tag="VHX39_02035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014242550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheX"
                     /protein_id="HEX3989931.1"
                     /translation="MSDDAVDLLDEMERDALTELVNLGVSRAAGSLRVMVRQEILLSV
                     PGVAIVPRSRAARMIGGKLATNLVAVCQDFDGDISGRALLIFPETKSLDLVRTITGGE
                     LPLEEIVALEHEALAETGNIILNNCLATIANTLRRTLRMSLPAIFRGDGGELFGLSAA
                     ADDLVLVLYINFTMNHRDITGYIAMLMDLPALRELQTLLRDLVLRVSEFPLKSHVTS"
     gene            complement(1843..2280)
                     /locus_tag="VHX39_02040"
     CDS             complement(1843..2280)
                     /locus_tag="VHX39_02040"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3989932.1"
                     /translation="MSYKVLVVDDSKLARMSIARLLGTLRPDWTRIEAANAAEALARQ
                     SQESIDLALVDFNMPGPDGLSVAADLHACNPAMPMAIVSANNQDEIVARAHALGAAFL
                     PKPLTQQALAEFLTTVESRRSATASHPSGLPGGGAVSLATNSE"
     gene            complement(2389..2661)
                     /locus_tag="VHX39_02045"
     CDS             complement(2389..2661)
                     /locus_tag="VHX39_02045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989933.1"
                     /translation="MTVDVAKDGTIVLAGICPVEDADTLVQLLLADPAAEIDWRTCDQ
                     AHTAVVQVLLASHRRTRGPPRTTFLSNWVEPLLAGPVDPLAPEPNV"
     gene            complement(2658..>3321)
                     /locus_tag="VHX39_02050"
     CDS             complement(2658..>3321)
                     /locus_tag="VHX39_02050"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HEX3989934.1"
                     /translation="TNLGLASETALAEMTDQAAVELIFSPGFSTASSVTSVSGRGVGM
                     DAVRAAVMRLGGRVTVTSQAGAGTSVRITLPFAVMLLRVMTVDASGQTFGIPIETVVE
                     TARVPRDQIRRLGAANVLVQRERTVPLVRLAGVLGLPESACLDADARIVVVSVSGQNG
                     TGHDTIEQTGALEVDALGERIDVMLKPMEGLLAGVRGFAGTALLGDGRVLIVLDLADL
                     LR"
BASE COUNT          633 a         1092 c          993 g          603 t
ORIGIN      
        1 cgcctccatc ttctgcgact gccgcagcgc atcttccgct ttcgccaaat ctccctgggc
       61 ccgccgttcg gccgtaacgt cgcgtccgac cgcctgcagc acgtcgtcag cgacgacggc
      121 gttccaggca atctgccgaa ccgccccatc gcggccgggc atccgcactt cgaacaatcg
      181 ggccgtccgc ctggccgcaa gctcgcccag cgtaacctgc aaccgcgcgc agtcggcggg
      241 cacaacgaac tcagccagct tcacaccaac cagcgttgct tcgtcccagc ccaactgcga
      301 ttgccaggcc gggttgaccg agatgatcgt tccatccagg tgagcgacga gcatcacgtc
      361 cgtcgacagc cgccacatcc ggtcgcgctc tgccgtccgc tcggcgaccc gctgttcgag
      421 ggtctggttg agttgccgca aggcctgctc ggcggcgcgc cgctcgttca cgtcacgcag
      481 gattgcggtc acgaaaatgc gttggtcgct ctgccagccg gatgcggaga tctcaagaaa
      541 tgtcgcactg ccatctttgc ggcgtgcgat caggtccacc gggcgatcta acggcacgcc
      601 gcgtgcgacc gcagcccaga ccgcctccca ggccgcgcta tcgtgcagca actcggtgat
      661 cggcaccccg gtcaattccc gagacgcata accgaactgc cgggcggcgg cagggtttgc
      721 caactggatg atgccatcgg agctcagcgt gaggatggca tcaggcgcac tttccacgac
      781 cgcgtcgtag cgcgcgttct gtcgttcacg caggactcgg tcgcgttctg tcgccacggt
      841 gacgtcggtc acctggatca gcaccaacgc tggagcgcgg gcgatcgggc gaaccagaac
      901 gttgtggatc attggccttc cgtcgcgcgt acgcagcggt agcaaacccg gattcaaggt
      961 gtgcgtcagc acgccggata cgcctgaggc caccgcgtct gtgatcgagc caatcagccg
     1021 cgatttggtc agaccaggga agattgcttc caggattcgg cggtccgctg catttgccgg
     1081 aatgccggtt gatgcctcca tccactgatt ccagccgaga acgcggcgtt cggcatcgac
     1141 aataatgagg cccgcatcaa tcgcatcgaa cacgccgtcg gtgatcgggg aatcagcttg
     1201 taacatggct tttcaaggga aattcgctga cccgcagaac caggtcgcgc agcagggttt
     1261 gcagctcacg caacgccgga aggtccatca gcatggcgat gtagccggtt atatcgcggt
     1321 gattcatggt aaagttgatg taaagcacca gcaccaggtc gtccgccgcc gccgacagtc
     1381 cgaacaattc gcccccgtcg ccacgaaata tggccggcaa cgacattcgc agggtccgcc
     1441 gcagagtgtt ggcaatcgtc gcaaggcaat tgttcagaat gatgttgccg gtctcggcga
     1501 gtgcctcgtg ctccaacgca acgatctctt ccaacggcag ttcgcccccg gtaattgtcc
     1561 gcaccagatc gagacttttg gtctccggga atatcaacaa cgcgcggccg gaaatgtcgc
     1621 catcgaagtc ctggcacacg gcaacgaggt tggtcgccaa ctttccgccg atcatccgcg
     1681 cggcccggct acgtggaacg atcgcgacgc cggggactga gagcaatatt tcctggcgga
     1741 ccatcacccg caggctgcct gctgcccggc tcactccaag gttgaccagc tcagtcaggg
     1801 cgtcccgttc catttcgtcc aacagatcga ccgcgtcgtc gctcattcgg agttggtcgc
     1861 aaggctgacg gcaccgccac ctggcaaccc ggacgggtgt gaagccgttg ccgaccgccg
     1921 cgactcaacg gtggtaagga attctgccag cgcctgctgc gtgagcggct tcggcaagaa
     1981 cgcggcaccg agcgcatggg cgcgggccac gatttcatcc tggttgttgg cagaaacaat
     2041 tgccatgggc atggcggggt tgcaggcatg caggtcagcg gcgaccgaca gaccgtcggg
     2101 cccgggcatg ttgaaatcga cgagcgcgag atcgatgctt tcctggcttt gccgcgccag
     2161 ggcttccgcc gcattcgcgg cttcgatccg ggtccagtcc ggccgtaatg ttcccaggag
     2221 gcgcgctatc gacattcgcg cgagtttgct gtcgtcaacg accagaactt tgtaagacat
     2281 acaatcatcc tcaatccggg acctgatccg ggtccggcct gccgtttacg cgcctgctcc
     2341 tcgtggacgg aggactgtgt catcagccca tcctgcgagc aagcggcctc acacgtttgg
     2401 ttcaggggcc agaggatcaa ctggtcctgc aagcaaaggt tcaacccaat tgctcaaaaa
     2461 tgtcgtgcgt ggcggacctc gggtccttct gtggcttgcg agcaagacct gcacgactgc
     2521 cgtatgggcc tgatcgcagg tgcgccaatc gatttcggca gccggatccg ccagcagtag
     2581 ctgcaccaga gtatcggcat cctcgaccgg gcaaatcccg gccagcacga tcgtgccgtc
     2641 cttggcgaca tcaacagtca tcgtaacagg tccgcgagat ccaatacgat cagcacccgg
     2701 ccatcgccca gtagagccgt gccggcgaag cctctgacgc cggcgagcag gccttccatc
     2761 ggcttcagca tcacgtcgat ccgttcgccg agggcgtcga cctccagggc gccggtctgt
     2821 tcgattgtat cgtggccggt cccgttctgg ccagaaacac tgaccacgac gatacgggca
     2881 tcggcatcca ggcaggcaga ctccggcaag cccagtaccc cagccaaccg gaccaatggc
     2941 acggtgcgtt cgcgctggac gagaacattt gcggcgccga ggcgacgaat ttgatcgcgc
     3001 ggcacccggg ctgtttcaac taccgtctca atcggaatgc cgaaggtctg gccgctggca
     3061 tcgaccgtca tcacacgcag cagcatgacc gcgaatggca aggtaatgcg cacgctcgtg
     3121 ccggcgccgg cctggctcgt caccgttacc cggcctccca ggcgcatgac cgctgcccgc
     3181 accgcatcca tgccaacgcc acggcctgac acggatgtga ctgaagaggc ggtcgaaaat
     3241 ccgggagaaa agatcagttc gacggctgcc tggtcggtca tttccgcgag cgcggtttcc
     3301 gatgcaagcc ccagattcgt t
//
LOCUS       DATAVD010000115         4398 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2058376, whole genome shotgun sequence.
ACCESSION   DATAVD010000115 DATAVD010000000
VERSION     DATAVD010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4398
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2058376"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..1257)
                     /locus_tag="VHX39_02055"
     CDS             complement(58..1257)
                     /locus_tag="VHX39_02055"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3989935.1"
                     /translation="MDFNFTAEQQRLRDRCLELAADFATRSAEHDRDASHPIENYNRL
                     RSEGFLHLTVPTRWGGSGYDFLSHTIAYEALGRGCPSTALAFNMHASVVMPILESDEV
                     AIEAKQRVVDLVVHQGKMIGGNFSEPGHTSLISERPLSVTARAVDAGYRVTGRKMFAS
                     MIEAADYVLVLVRPETTESRTAGMLVLIPPDADGRRVIANWDTLGMRATRSDSLVLED
                     CWVPEESVIYRSDDISRFRNAGLNWFWGSYTAVYLGLAGAAYDELRKVVTDRQPQGYA
                     QSLAWHPDVRRHIAELSVDLEAARLITYRSAWLRDQQGPTPEATAAMYRAKYMVGVAT
                     SRITRVALTLGGAHGIFKGSRLEQLFRDGALAEIQPPPSDFCLWNVGLHELGLDPAEA
                     LPPMRPL"
     gene            complement(1265..2191)
                     /locus_tag="VHX39_02060"
     CDS             complement(1265..2191)
                     /locus_tag="VHX39_02060"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3989936.1"
                     /translation="MALKDKIPLGMSLPHRSPDPLAMTTVATVARRAEELGFRDLWVT
                     ENTIDRNTCFDPVVILTYAAAITSRIRVGASVVVLPIHSPLMVAHQWATLDFVSGGRA
                     ILAVGLGRDHHYRDFQIPVSGRVTRFREEVELIKALWSEDNVTYRGEMYQVENLTLAT
                     RPAHKPRPPLWMGVGHPNAVRRAARIADGWMGSGGSSIAEFKASVPILKQELEKAGRD
                     PLTFPISKRVFMAVDEQPAVARAELNRWFTEVYHNPAGTDASGIHGTPEQVAERLEEL
                     VAAGANHLLLNPVSRHTEQVEAVAALAGLGSG"
     gene            complement(2204..2560)
                     /locus_tag="VHX39_02065"
     CDS             complement(2204..2560)
                     /locus_tag="VHX39_02065"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3989937.1"
                     /translation="MAFVVNHVHLKTPDPAATARFYIENFGATMKQEIPGRGLQLDLH
                     GLQLNITTLIAVQNHEQHYGIEHIAINTDDYPGTLAKLKANGVKVLEELPVNNGRHVC
                     FLQAPDGAQMELIEKV"
     gene            2673..4034
                     /locus_tag="VHX39_02070"
     CDS             2673..4034
                     /locus_tag="VHX39_02070"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX3989938.1"
                     /translation="MTVARQLAAFLTQTKTADLPAQALDYAAMVVASTFASAAFGTGI
                     ESAQIIRAMAQERGGRADASVWFDAGDKLPVASAIQVNAVLSDAAASDDSDLRNIVHA
                     GTPLTAAALAFAEREGSNGEAVLTAIVLGYEAAGRISEAMTPGFKDRGFHGCLGAAFG
                     SAVASARMLNLDAEGMAQTIALTAVSIGGLATAADTSVSREYHAGLAAMHGANAALAA
                     RRGYVGEARILEARRGFFEAFGGVDGASAGEIAVRDLGRSWDIMTDMAIKLVPGGHPY
                     HAIAEAAGNATREAGIAAEQIYAITIHRPGMKTLSGPLHPADLIDMAHSPAYFAAAGA
                     ADRGFSWVHASQAKIADPVIHALIDKVIVGAEPTENLSRYRQGATVTISTRDGRTVSN
                     TVFEPKGSAALGISWNDIDTKYRTLMPASGLPEREIESSLTLIHDFRNLADVSRLTNL
                     LRV"
BASE COUNT          840 a         1313 c         1356 g          889 t
ORIGIN      
        1 aagtccggca acgaaggcag aaaattcgcg actgagcgac atgggggcag tcctttttca
       61 gagcggccgc atcgggggta gcgcctccgc tgggtcaagg cccagttcat gcaggccgac
      121 gttccataga caaaagtccg acggcggcgg ttggatttcc gccagcgcac catcgcggaa
      181 caattgttcc aggcgcgatc ctttgaagat gccgtgtgct ccgcccaggg tgagcgcgac
      241 gcgtgtgatg cgactggttg cgacaccgac catgtatttg gcgcggtaca tcgctgctgt
      301 ggcctcgggc gttggtccct gttggtcgcg cagccacgcg gaacggtagg tgattaaccg
      361 tgccgcttcc aggtcgacgc tgagttctgc gatgtggcgg cggacatcgg ggtgccacgc
      421 aagggattgc gcgtagcctt gtggttgccg gtcggtgacg actttgcgca attcgtcata
      481 cgctgcgccc gccaggccga gataaaccgc cgtgtatgaa ccccagaacc agttcagtcc
      541 ggcgttgcga aaccggctta tatcgtcgga tcgataaatc acggactctt ccggtaccca
      601 gcaatcctcc aggacgagcg agtcactgcg ggtcgctcgc atacccaatg tgtcccaatt
      661 ggcaatgacc cgccgtccgt cggcgtcggg cgggatcagc accagcatcc ctgcggtccg
      721 gctttctgtg gtttcaggac gcaccaggac caaaacgtaa tctgccgctt cgatcatcga
      781 ggcaaacatc ttgcggccgg taacgcgata tccggcatcg accgcgcgtg ccgtgacgct
      841 caatgggcgt tcgctgatca gcgacgtgtg ccccggctcc gagaaattgc cgccgatcat
      901 tttcccctga tgcaccacga gatcgacgac gcgctgtttt gcttcgatgg cgacttcgtc
      961 gctttcaagg atcggcataa cgaccgatgc atgcatgttg aacgcgagcg cggtggaggg
     1021 acaaccgcgg ccaagtgctt cataagcgat cgtgtggctg aggaaatcat agcctgatcc
     1081 gccccaccgc gtgggcacgg tcagatgcag aaatccctcc gaccgtaatc ggttgtaatt
     1141 ttcgatcgga tgcgaggcat cgcggtcatg ttcggcagac ctggtcgcga aatcggccgc
     1201 cagttccaga catcgatctc ggagacgttg ttgctctgcg gtgaaattga aatccacgtc
     1261 cgacttagcc tgacccgagt ccggcgagtg ctgccactgc ctcgacctgc tcggtgtgcc
     1321 gtgagaccgg attgagcagc agatgattgg cgccggcagc gaccagttcc tcgaggcgtt
     1381 cggccacctg ttccggcgta ccgtgaatgc ccgatgcatc ggttcccgca gggttgtgat
     1441 agacctcggt gaaccagcga ttaagttcgg cgcgcgccac tgcgggctgc tcgtcgaccg
     1501 ccatgaatac tcgtttcgat atgggaaatg ttagcggatc gcgtccggcc ttctccagtt
     1561 cctgcttcag gatcggaacc gatgccttga attcggcgat gctcgatcct ccggagccca
     1621 tccagccatc cgcgatccga gccgctcggc gaacggcatt gggatggcca acgcccatcc
     1681 aaagcggcgg tcgcggcttg tgagcgggtc ttgtcgccaa ggtgagattt tcgacctgat
     1741 acatctcgcc gcgataggtg acgttatctt cgctccacag cgccttgatc agctcgactt
     1801 cttcccggaa ccgcgtgacc cgcccggaga ccggaatttg gaagtcgcgg taatggtggt
     1861 cccgcccaag acccaccgcc aaaatcgccc gtccgccgct gacgaaatcg agcgttgccc
     1921 attgatgcgc aaccatcagt ggactgtgta ttggcaggac caccaccgac gcgccgaccc
     1981 ggatacggct ggtgatggca gccgcatagg tcaaaatcac cacgggatca aaacatgtgt
     2041 tacgatcgat cgtattctcc gtgacccata aatcccggaa accaagttcc tccgcgcgcc
     2101 gggcaaccgt ggcgacggtc gtcatcgcca acggatcggg tgagcggtgc ggcaacgaca
     2161 tcccaagcgg gatcttgtcc ttcagggcca cggcatggcg ctcctacact ttttcgatca
     2221 actccatctg cgcgccatcc ggagcctgca ggaaacaaac atggcggccg ttgttgacgg
     2281 gcagttcctc aaggactttg accccattgg ccttcagctt tgccagtgtg ccgggataat
     2341 cgtcagtgtt gatcgcgatg tgttcgatgc cgtagtgctg ctcgtgattt tggaccgcga
     2401 tcagcgtggt gatgttcagc tgcagtccgt gcagatcgag ttgcaggccg cgtccgggaa
     2461 tttcctgctt catggtcgca ccgaaattct cgatgtagaa acgagcggtg gccgccggat
     2521 ccggggtctt gaggtggacg tgattgacaa cgaaagccat ggtcgttctc ccctgtgtta
     2581 ccttcgccga ttgggcgcgc atcctgaccg gcggtcaaga tcgtgccagg ctctcgccca
     2641 acaacaggcc caaaatcagg aaggatccgc cgatgaccgt cgcccgccag ttggccgcat
     2701 ttttgaccca gaccaaaacc gctgatctgc cggcccaggc attggattat gctgcgatgg
     2761 tggttgccag cacgtttgcg agcgcggcct ttggcaccgg gattgaatca gcccagatca
     2821 tccgggcgat ggctcaggag aggggcggtc gcgcggatgc gtcggtctgg ttcgatgcgg
     2881 gcgacaagct gccggtcgcc agtgccattc aggtcaacgc ggtactgagc gacgccgctg
     2941 cctcggacga cagcgatctc cgcaatatcg tgcatgccgg cacgccgctg accgccgcgg
     3001 cattggcgtt tgccgagcgc gagggcagca acggcgaagc tgtgctgacc gcaatcgtgc
     3061 ttggctacga ggcagcagga cgtatcagtg aggcaatgac accgggattt aaggaccgcg
     3121 gctttcacgg gtgtcttggt gccgcgttcg gctcggctgt ggcgtcggcg cgcatgttga
     3181 acctggatgc agaaggcatg gcgcaaacca tcgcgctgac agcggtttcg atcggcggcc
     3241 tggcgacggc ggcggacacc agtgtttcgc gcgaatacca cgcggggctt gcggcgatgc
     3301 atggcgccaa cgcggcactc gcggcacggc gaggttatgt cggcgaggcc cgcatcctgg
     3361 aagcgcgtcg cgggttcttt gaagcgttcg gtggcgtcga tggcgcgtcg gcaggtgaaa
     3421 ttgcggttcg cgatctgggt cgaagctggg acatcatgac tgacatggcg atcaagctgg
     3481 tgccgggcgg tcacccctat cacgcgatcg ccgaggctgc cggcaatgca acgcgcgaag
     3541 ccggtatcgc ggctgagcaa atttatgcca ttacgatcca tcggcctggt atgaaaacgc
     3601 tcagtggacc gctgcatcca gccgatctta tcgatatggc acacagtccc gcttatttcg
     3661 ctgccgcggg ggcggctgat cgcgggtttt cctgggtcca tgcaagtcag gccaagatcg
     3721 ccgatccggt gatccacgcg ttgatcgaca aagtcattgt cggtgccgaa ccaaccgaga
     3781 acctgagccg ctaccggcag ggcgccactg tgaccatcag cacccgcgat ggccgcaccg
     3841 tgtccaacac ggtgtttgag ccaaagggtt cagcggcact ggggatttcg tggaacgata
     3901 tcgatacgaa atatcgcacc ttgatgccgg cgtccggtct gccggaacga gaaattgagt
     3961 cgagcctgac cttaatccac gatttccgca acctggccga cgtgtcgcga ctgaccaacc
     4021 tgttgcgggt gtgacatttg gttgctgccg gtcctgaaga gtgccaggtc cggccaaggt
     4081 tgttggcagt taaataggct ctcaaggtac caatccatga ttcaatcaag tctggtccat
     4141 caatccaccc ccagtaccgc aacaaacact gtgccgatgg tgctactgca cggttccggc
     4201 ggaaatgagc gtgatctggt gccactcgcg gcagagctgg cgccgggggc accaatcctc
     4261 tcactccgcg gcacggtaga aattgacggc gggttcgcat tctttcatcg ccaccccgat
     4321 cgttcgatcg atgaagttga tctcgccgca cgcattgcgc cgctggccgg cgttattgcg
     4381 gccgccagca aagagcat
//
LOCUS       DATAVD010000116         1594 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2988523, whole genome shotgun sequence.
ACCESSION   DATAVD010000116 DATAVD010000000
VERSION     DATAVD010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2988523"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            555..1340
                     /locus_tag="VHX39_02075"
     CDS             555..1340
                     /locus_tag="VHX39_02075"
                     /inference="COORDINATES: protein motif:HMM:NF012774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEX3989939.1"
                     /translation="MRFRIFASPIRPPLLRCLILLPGLLLGAAPALAANAIVKDGNTI
                     QLADATYRLDGIDAPELDQICIDDHADPWSCGLDARGQLAKLVAGHVVHCEDRGPDPA
                     YKKRHLGICTVEGDTTSLNQSMVRLGFAMNAEPPAKGSFTEDEAAAKAGRKGLWQGCL
                     VAPLDFRLGNKDGPLLGGACPADKDKEIRSVLFPEFLAMPPRCTIKAKFAVRARVTGN
                     AGIYHLQGCPSYPATTKPDRWFCTEDDAQAAGFRRAYNCRAGK"
     gene            complement(1375..>1594)
                     /locus_tag="VHX39_02080"
     CDS             complement(1375..>1594)
                     /locus_tag="VHX39_02080"
                     /inference="COORDINATES: protein motif:HMM:NF015582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome C oxidase subunit IV family protein"
                     /protein_id="HEX3989940.1"
                     /translation="IPVAIVVLAIAQMGVHVVFFLHITTGPDNTNNVMALAFGILIVV
                     FVVGGSLWIMSHLNHNMMPTDQLMQMQR"
BASE COUNT          303 a          543 c          489 g          259 t
ORIGIN      
        1 cgtactgcgc cgcgcgtccc gtccagctgg ccttgcccgc gctgtccctg gggacgggct
       61 ggccgccgtt ggcgtagccg cgggccccga ccatccccag cagcaaagcg aaagcgagac
      121 cgacaagcac gaaaaccggc agcaaaaccc attgtacgga catgaaaacc tccccagcca
      181 tgaagcgcgg acactggcta tagcgaccgc accccgccct gacaatgaat cggcgtgtca
      241 ggcatcaaaa cgcaaatagg gtgttagaga ccctatcgcg gtggttcccg tgatttgcgt
      301 ctcgaatcgg ccctaacagg ggaaatgcga tggacctgac gtccgatacc gtcacctcgt
      361 tcttcaggcg gcctcgcggc tgtcgcggcg cccgggctgc tcggcttcgc ggtctacaaa
      421 atgcacgacg ccgcactggt ttatttgggc gtcatctgaa ttcgcatccc gcgccgccgc
      481 gaccggccgt ggtcttgccc gatcaggata tgctaggaag ttccgggtca gcgcttacct
      541 gcccgagaga acgcatgcgg ttccgaattt ttgccagtcc aatccggccg ccgctgctcc
      601 gttgcctgat cctgctgccg ggactgctgc tgggggcagc gcccgccctg gccgccaacg
      661 ccatcgtcaa ggacggcaac accatccagc tcgcggacgc cacctaccgg ctcgacggca
      721 tcgacgcgcc ggagctcgac caaatctgca tcgacgacca cgccgatccc tggagctgcg
      781 gcctcgacgc ccgcgggcaa ctggcaaagc tggtcgcggg ccatgtggtc cactgcgagg
      841 atcgcggccc ggaccccgcc tacaagaagc ggcacctcgg catctgcacc gtcgagggcg
      901 acaccaccag cctgaaccag tcgatggtcc ggcttggttt tgcgatgaat gccgagccgc
      961 cggccaaggg cagcttcacg gaggacgaag ccgccgccaa ggccggccgc aagggactat
     1021 ggcaaggctg tctggtcgcg ccgctggatt tccggctcgg caacaaggac ggtcccctgc
     1081 tcggcggcgc ctgcccggcc gacaaggaca aggagatccg cagcgtgctg tttccggaat
     1141 ttttggcgat gccgccgcgc tgcaccatca aggccaagtt cgcggtgcgc gcccgcgtca
     1201 ccggcaatgc cggcatctac catttgcagg gctgccccag ctatcccgca accaccaagc
     1261 ccgaccgctg gttctgcacc gaggacgacg cgcaggccgc cggctttcgg cgggcgtata
     1321 attgcagggc tggcaagtga ggcgttgccc ggactggcga cgcaacgacg cgctctaccg
     1381 ctgcatctgc atgagctgat ccgtcggcat catgttgtga ttgaggtgcg acatgatcca
     1441 cagcgaaccg ccgaccacga acaccacgat caggatgcca aaggcgagcg ccatcacgtt
     1501 gttggtattg tccggtcctg tggtgatgtg caggaagaaa accacatgca cgcccatctg
     1561 cgcgatcgcc agcaccacaa tggcgacggg aatg
//
LOCUS       DATAVD010000117         2248 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_756774, whole genome shotgun sequence.
ACCESSION   DATAVD010000117 DATAVD010000000
VERSION     DATAVD010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_756774"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1325)
                     /locus_tag="VHX39_02085"
     CDS             complement(<1..1325)
                     /locus_tag="VHX39_02085"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3989941.1"
                     /translation="MGRIKMVGYKVGGAAAALMLLLAGPPAQAQGVLKIGMTAADLPI
                     TTGNPDQGFEGYRFVGYNLYDSLIEWDLSSSTKPSELVPGLATAWHIDPKNDHRWIFD
                     LRKGVKWSDGCPFVASDVVWNLGYLTDPKAPQYYAAEAAQAGPYLTNYKSSEVIDDHT
                     VAITTNSTDSLFPYEISYVLMISPCQAKAVKYDWNAYSAKPSGTGPYLFAGERPHQEM
                     DLVPNKNYWNKDRIPKQDRVELFPMPNSSTRTAALLSGQVNWIEAPDPDSVKRLKGAG
                     MQVITNTYPHNWSYQLNFVKGPFANLKIRQAANYAINRADMKELLDGMMIEGNSSVPP
                     GTPYRGNPIPYHHDTAKATALLKEAHCYPCAIDLAISTSGSGQMQSLPMNELVKQQLD
                     AAGFQTKLDVMDWNALLAVARAGVDKYPNINGINVSRQVQDPFNALIRHV"
     gene            complement(1856..>2248)
                     /locus_tag="VHX39_02090"
     CDS             complement(1856..>2248)
                     /locus_tag="VHX39_02090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrB/UvrC motif-containing protein"
                     /protein_id="HEX3989942.1"
                     /translation="WNEANGITPVSIRRQIGNVLESVFEQDYVTVAPVKDSDAAEFVG
                     KNLKASIADLEKRMRAAASNLEFEQAARLRDEIKRLEALELGLPAPPMASALLRPKRG
                     QAPEPMGPGGGGYDPSKRRGGMKRRRGP"
BASE COUNT          411 a          767 c          636 g          434 t
ORIGIN      
        1 acgtggcgga tcagcgcgtt gaacgggtcc tgcacctgcc ggctgacatt gatgccgttg
       61 atgttcggat atttatcgac gcccgctcgg gcaaccgcca gcagcgcgtt ccagtccatc
      121 acgtccagct tggtctggaa ccccgccgca tccagttgct gcttgaccag ctcgttcatc
      181 ggcagcgact gcatctgtcc cgaccccgag gtcgatatcg ccaggtcgat cgcgcaagga
      241 tagcaatgcg cctccttcag caacgcggtc gccttggcgg tgtcgtgatg gtacggtatc
      301 ggattgcccc ggtacggcgt gccgggcggg acggaggagt tcccctcgat catcatcccg
      361 tccagcaatt ccttcatgtc agcccggttg atcgcgtagt tggccgcttg ccggatcttc
      421 agattggcga acgggccttt cacgaaattg agctggtagc tccagttatg cggataggtg
      481 ttggtgatga cctgcatccc cgcgcccttc agccgcttca ccgaatccgg gtcgggcgcc
      541 tcgatccagt tgacctgccc cgacagcagc gccgcggtgc gggtcgacga attgggcatc
      601 gggaacagct cgacccggtc ctgcttcgga atgcggtcct tgttccagta gttcttgttc
      661 ggaaccagat ccatttcctg gtgcggccgt tcgccggcga acagataagg gccggtgccg
      721 gatggcttgg ccgaatatgc gttccagtcg tacttgaccg ccttcgcctg gcacgggctg
      781 atcatcagca catagctgat ctcatacgga aacagcgaat ccgtcgaatt ggtcgtaatc
      841 gcaacggtat ggtcgtcgat cacctcggag cttttgtagt tcgtcaggta cggaccggcc
      901 tgcgccgcct cggccgcata atattgcggc gccttcggat cggtcagata gcccaggttc
      961 cacaccacat cgctggcgac gaacgggcat ccgtccgacc atttgacccc cttgcgcagg
     1021 tcgaaaatcc atcggtgatc gttcttcgga tcgatatgcc acgcggtcgc cagccccggc
     1081 accagttccg acggcttggt cgaactggaa aggtcccatt caatcagtga atcgtaaaga
     1141 ttgtagccga cgaaacgata gccctcgaac ccctgatccg ggttgcccgt ggtgatcggc
     1201 agatcggcgg cggtcatgcc gatcttcaac acgccctgcg cctgggcggg cggtccggcg
     1261 agcagcagca tcagggccgc cgcggcgcct ccaaccttgt acccgaccat cttgattcgt
     1321 cccatcaatc acctcgtcac gtggaagcca cggatcactg gcgcagcaag tgtcatgcca
     1381 atcgacggat accgggacat cgcgccgcaa aggtcagccg gtcacctgga tggacatcag
     1441 ggtgccgtat ttctcacctt ccggcggaga aaacctgccc aaagccacaa atcagattat
     1501 tctttgcgcg ttagcctgaa ttccaggcaa tccaggcgct ggcaagcctg ccccgccgct
     1561 ggccgcgacc aagagtcgat cccgcggtgt tgcaagcaag aatccaacac acataaacgc
     1621 ggatcaggag gggtgaacgc gatgccaccg agagtgcgcg ttgccattgg gcctccccga
     1681 cacagacgcc gcggcggatc ggcctctcgg aaccatttgc gtgaatcccc tctgatccgc
     1741 gctaaatctg cgttgagtct ttcttgccct cggcgagagg ccgcaccgcc gctgccggcg
     1801 cggcacccca gtcgggacgc cggccgccaa caagcaacgc caccgcgaca accactcacg
     1861 gaccgcgccg ccgcttcatg ccaccccggc gcttcgacgg atcgtaaccc ccaccaccag
     1921 gccccatcgg ctccggcgcc tgtccccgct tcggccgcaa caacgcgctc gccatcggcg
     1981 gcgccggcaa ccccagttcc agcgcctcca gccgcttgat ctcatcccgc aaccgagccg
     2041 cctgctcgaa ttccaggttg gacgcagcag cccgcatccg cttctccagg tcggcgatcg
     2101 acgccttcag gttcttgccg acgaattccg ccgcatccga gtccttgacc ggcgccaccg
     2161 taacgtaatc ctgctcgaac acgctctcca gcacattgcc gatctgccgc cggatcgaaa
     2221 ccggggtgat cccgttcgcc tcgttcca
//
LOCUS       DATAVD010000118         2895 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2616908, whole genome shotgun sequence.
ACCESSION   DATAVD010000118 DATAVD010000000
VERSION     DATAVD010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2895
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2616908"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VHX39_02095"
     CDS             <1..216
                     /locus_tag="VHX39_02095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989943.1"
                     /translation="QGSRFRVIEADEPRLSDGLHAFEADNAFRWTNGDAALPDTLFAD
                     FTGPVEIAIHYAATAYYIDDDTSRHIA"
     gene            complement(303..1142)
                     /locus_tag="VHX39_02100"
     CDS             complement(303..1142)
                     /locus_tag="VHX39_02100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013844528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEX3989944.1"
                     /translation="MPWNETDRVKYAVIRERYASDLSDEEFALIAPLLPPAKPRGRKP
                     TDPRVILNALFYLIRSGCPWRYLPKDFPPFTTVQNRFYAWRDSGLWEQILAVLVMALR
                     EAHHKSASPSVVIVDSQSVKTTEAGGPSGYDAGKKIKGRKRHIAVDTLGLPVKCHVTT
                     ADVQDRDALPALLNAVSKRAPWVRLAFVDGAYAGDETARAAFEASRIRLEVVKRTDKE
                     IKGFIVLPKRWIVERTFGWTNRARRLAKDFETLIESSKAWFLLAVAFLLLRRLARDYK
                     VAA"
     gene            complement(1262..2650)
                     /locus_tag="VHX39_02105"
     CDS             complement(1262..2650)
                     /locus_tag="VHX39_02105"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX3989945.1"
                     /translation="MTHDRIESATAQPTVPPILVSWLAVFRPCFTAPVWNHILVLVGG
                     AVLAPGKRTVTQTLRVMGLADQPGFGRYHEVLNRARWDARDVARRLLLHLLAMLSPSD
                     EVIIGIDDTIERRWGGKIKARGIYRDPVRSSHGHFVKTSGLRWLSLAVMLPVPFAGRR
                     WALPFLTVLAPSARWSEARGKPHKALTDWARQAILQTKRWLPDRRVIVVADSGFSALQ
                     LIAAVRQYVCFITRLRLDASLFEPAPKRQKGQMGRPALKGKRRPKLNAVLTDPKTVWT
                     SVMLTEWYGGQTRKLDYVCGTAVWYHNGMPPAAIRWVLVRDPSGQRDPQAFLCTDLDL
                     EPTAILKRFVCRWRIETTFQEAREHLGVETQRQWSDLAILRTTPALLGLYSLVAVWAQ
                     ELAQHAGTAVRPHPAAWYHKHQPTFSDAIAAVRRVLWSPPSFSTSRSDPESTEIPISL
                     LNRFVETLCLAA"
     gene            complement(2711..>2895)
                     /locus_tag="VHX39_02110"
     CDS             complement(2711..>2895)
                     /locus_tag="VHX39_02110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989946.1"
                     /translation="YAPLPNAQNITTEYVSGEALSYIRNNIVQIADLLSSTFRNFVPI
                     GGQVITQRMSSIGGEA"
BASE COUNT          558 a          852 c          918 g          567 t
ORIGIN      
        1 cagggtagcc gattccgcgt gatcgaggcg gatgagcccc gtctctcgga tggcttgcac
       61 gcgttcgagg ccgacaatgc tttccgttgg accaacggcg atgccgcatt gcccgatacg
      121 ctgttcgccg atttcaccgg acccgtcgag atcgccatcc actacgcggc aaccgcgtat
      181 tacatcgacg acgacacatc gcgacacatc gcatgatggc tgaccggcta caacaccgca
      241 gcatgaaaac acctcagatt ccgagtattg cattcgcaat gtcctaagac cctgactcga
      301 aatcacgcgg ccaccttgta atctctggcg agacggcgga ggaggaggaa ggcgacagcg
      361 agcaggaacc acgccttgga actttcgatc agcgtttcga aatccttggc gaggcggcgt
      421 gcgcgattgg tccagccgaa ggtccgctcg acgatccaac gcttgggcaa gacgatgaac
      481 cctttgattt ccttgtcggt ccgtttgacc acttcaaggc gtatccggct tgcctcgaag
      541 gcggcgcgcg cggtttcgtc gccggcgtag gcaccatcga cgaaggccaa cctgacccag
      601 ggtgcgcgct tgctgaccgc attcagcagc gccggcaggg catcgcgatc ctgaacgtcg
      661 gcggttgtga catggcattt gaccggcagg ccgagcgtat cgaccgcgat atggcgtttg
      721 cgtcccttga tcttcttgcc ggcgtcgtag ccacttggcc cgccggcctc ggtggtcttc
      781 acggactgac tgtcgacgat cacgacgctg ggggaggcgc tcttgtgatg cgcctcgcgc
      841 aacgccatga ccagaacggc aaggatttgc tcccacagtc cgctgtcgcg ccaggcgtag
      901 aagcggttct gcactgtggt gaagggcggg aaatctttcg gcaggtaccg ccaggggcag
      961 ccggatctta tgaggtagaa caatgcattg aggatcaccc tcgggtctgt cggcttgcgg
     1021 ccgcgcggtt tggcgggcgg cagcaatggc gcgatgaggg cgaattcctc atccgacagg
     1081 tcgcttgcgt agcgttcgcg gatcaccgca tatttcacgc gatcggtctc gttccagggc
     1141 atgcgaatca ctcggtcttg ttgcagagcc agcgaatcgc agcccgcgag gccggtcaac
     1201 cttcccgtta tgtcgttgcg aaactgtttc cggtcaggct ctcagctcga ctttccgcaa
     1261 ttcaggcggc gagacacaga gtctccacga atcgatttag caggctgatt ggaatttctg
     1321 tgctttcggg gtccgaccgg gacgtggaaa aactcggtgg cgaccacaag acgcggcgga
     1381 cggctgcgat cgcgtcgctg aaggttggtt ggtgtttgtg gtaccaagcg gcgggatggg
     1441 ggcggaccgc ggtgccggca tgctgtgcca attcctgcgc ccagacggcc accagagagt
     1501 agaggccgag tagcgccggt gtcgtgcgca ggatggccag gtccgaccat tgccgctgcg
     1561 tctcgacgcc cagatgttcc cgtgcctctt ggaaggtcgt ctcgatccgc cagcggcaca
     1621 cgaagcgttt gaggattgcg gtgggctcga ggtcgaggtc ggtgcaaaga aacgcctgcg
     1681 ggtcacgctg gccggacggg tcacgcacca gtacccagcg gatcgctgcc ggaggcatgc
     1741 cgttatgata ccagacggcg gttccgcaga catagtccag cttgcgggtc tgaccaccgt
     1801 accattcagt gagcatgacg gatgtccata cagtcttcgg atctgtgagc acggcgttga
     1861 gtttgggccg gcgtttgcct ttcagtgcag gccggcccat ttggcctttc tggcgtttcg
     1921 gtgccggctc gaacaaactg gcgtcgaggc gcagcctcgt gatgaagcag acatactgac
     1981 gcacagcggc gataagctgc aatgccgaga aaccgctgtc ggcgacgacg atcacacgac
     2041 gatccggcag ccagcgtttg gtttgcagga tcgcctgccg ggcccagtcg gtcagtgcct
     2101 tatgcggctt gcctcgtgcc tcgctccagc gtgctgatgg cgccagcacg gtgaggaaag
     2161 gaagagccca tcgtcgaccg gcgaacggga ccggcagcat caccgccagc gacaaccaac
     2221 gcaaaccgct ggtcttgacg aagtggccat gcgacgaccg caccgggtcg cgatagatgc
     2281 cgcgtgcctt gattttgccg ccccagcgcc gctcgatggt atcgtcgatg ccgattatca
     2341 cctcatcgct gggcgatagc atcgccagga gatggagcaa taatcgacgc gccacgtcgc
     2401 gggcatccca gcgcgcccgg ttgagcactt cgtggtagcg gccgaaaccg ggttgatccg
     2461 ccagccccat gacgcgcagc gtctgggtga cagtgcgctt gccaggtgcc agcacggcgc
     2521 cgccgaccag taccaggata tggttccaga ccggtgcggt gaagcacggt cggaaaactg
     2581 ccagccacga tacaaggatt ggcggcactg ttggctgggc ggtcgccgat tcgatgcggt
     2641 cgtgtgtcat cgaatcggta gaatcgagtc acccccattg cgcaagagtc ctcagacatg
     2701 agcagacaca ctatgcttca ccgcctatgg aggacatcct ctgggttatg acctgaccgc
     2761 caatcgggac gaaattgcgg aaagtcgagc tcagaaggtc agcaatttgt acgatgttat
     2821 tgcggatata actgagcgct tctccgctga cgtactctgt ggtgatgttt tgagcattag
     2881 gcaaaggtgc ataag
//
LOCUS       DATAVD010000119         4425 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1313956, whole genome shotgun sequence.
ACCESSION   DATAVD010000119 DATAVD010000000
VERSION     DATAVD010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4425
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1313956"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1031..2074
                     /locus_tag="VHX39_02115"
     CDS             1031..2074
                     /locus_tag="VHX39_02115"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HEX3989947.1"
                     /translation="MNTRYWTLAKRPPPPWPDDATFALKEAPIPTPGPDQALTRTLYV
                     SLDPYQWGRMRRGEEPEGAPCHARTVSQVVESRIEGLAAGDFVFNTNGWAEHGLMGEG
                     VPRPGYMIPRKLDPTRGKISHAVGVLGMLGLTAYAGMVLQCEPKPGETTVVSAASGGV
                     GQIAGQIARLKGCRVVGIAGREEKCRYVVEALGFDACTSRLPPSFPQDMRAACPDGID
                     VYFENVGGAVFDAVLPLFNPGARMTICGLIAHYGDAPGADSRAQERSRAEARNVRVRN
                     LSVGEYAADWHDAFLAEMSPWVASGEIRYREDIREGLEVIPTAFAEMLRGENFGKTLV
                     RVAPDPTLASQRG"
     gene            complement(2359..2631)
                     /locus_tag="VHX39_02120"
     CDS             complement(2359..2631)
                     /locus_tag="VHX39_02120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989948.1"
                     /translation="MKPLPKDSLVAKQYPEHRVADPQRPYFSIVPRYASLRVVAARIA
                     VDHGRTNHISIRVSLRDLIMNHVGATGTIAAMIKPYGALDSPGERN"
     gene            3320..4183
                     /locus_tag="VHX39_02125"
     CDS             3320..4183
                     /locus_tag="VHX39_02125"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX3989949.1"
                     /translation="MAEKMRYNKIIDILEHGKPVFSTSTVPNGNLDDLTYIADADYDA
                     VVIEMEHEGFGFATLRTSLQVLLNRKRIAEKGNLQPDVVPMVRIPPNARERDQWVIKQ
                     ALDTGVYGLVLPHLNTVEDGQAAVAAARYPQVPGVQDFAPVGERGWGNRIASRYWGLT
                     PQEYYDAADLWPLDPDGNILLMGIIEEAEGVRNIRDILHQVRGIGAIWAGSGDMSVSM
                     GLRGEAGHPTVQENVLRILAACKEFGVPCATIATADDVAMRLEQGFRIIMTAPVRSTP
                     GLVEGRRLAAR"
BASE COUNT          878 a         1300 c         1393 g          854 t
ORIGIN      
        1 gtgtcctgcc cgccatcaag taggtaatac ctgttgaagc ccggcagatc gcgcaacagg
       61 gggacaaagc tatcgtttac acgttgcgtc acgtcaccaa tcgatccgcg tgcaagccgg
      121 aaccttctga cgattgtgaa catgttttcc tcccggccag cgcaaattgc gtgagatttc
      181 tgacacgacg acgcctataa gggcgcctcg cagcaaccct tctgtcaatt cctgctgcgg
      241 tgtcatatca ggaatatgga cgagcgctcg accatcccgc cgatcgcgat catgtccgcg
      301 cttcttcgaa atcgtcgggt gccataccat cgggagggtg gcaaacatga cagcgccatc
      361 caaaatgatc gcgcgtccac caatgccgaa gacggcagca actgcaccac tcgcctttgg
      421 ctggcacctg aaataacgtt ctaaaattcc cgggcgacaa cgcgggggac aggtatcagg
      481 gaaactcccg atgccgaaac acaagcgaca acgtttaccc atcggtccag cctttggagc
      541 acaccagatg ggacggaaac ctatacggag cttcttgcca cttatcgacg ctggaaaagt
      601 atgaaatcac gaaattgagg ccaggaaggc gatcgacagt gggtcggtcg gatgtaacag
      661 ggcatcaccc ggacgttcga accattgaag atggcaaatg gaatagcaga cggacgtcgt
      721 agttgccgat ggcaaaattg ttcatcaccc tcatgacggg ccggccacgg ttgccctgga
      781 ggcgccgccc gtcattcccg agcacaccat gacggatggg cattgccatc gcctcatatc
      841 ctggcgactc gcggcaggtg atgcatgtca ataactctcg cgggatggag cgcctgtgac
      901 cgtgaccaat ggatcccggg tggcaccgtc gtgacatctt taccaattga aacggcgtgc
      961 cccggcggca gtggtggtgg acgccgcctg cggcgggtgg caaagttgcg gctgcttgtt
     1021 ggagagcatc gtgaacacgc gctattggac gctcgcgaaa cggccccctc cgccctggcc
     1081 ggatgacgcc acttttgcgc tcaaggaggc gccgatcccg acgcccggtc ccgaccaggc
     1141 gctcacaagg acgctctacg tctccctcga tccatatcag tggggccgca tgcgccgcgg
     1201 cgaggagccg gagggcgcgc cctgccacgc tcgcacggtg tcgcaggtcg tcgaaagccg
     1261 gatcgaaggc ctcgccgccg gagatttcgt gttcaacacc aacggctggg ccgagcacgg
     1321 tcttatgggg gaaggcgtcc cccggccggg ctacatgatt ccccgcaagc tcgatccgac
     1381 ccgcggcaag atcagccacg ccgtgggcgt gctcggaatg cttggactaa ccgcctatgc
     1441 gggcatggtc ctgcaatgcg agccgaagcc cggtgagacg acggtcgtgt cggcggcgtc
     1501 cggcggcgtg ggtcagattg ccgggcaaat cgcgcggttg aagggctgcc gcgtggtagg
     1561 catcgccggg cgcgaggaga agtgccgcta tgtggtcgag gcgctcggct tcgacgcctg
     1621 tacctctcgc ctgccaccca gttttcctca ggacatgcgg gctgcctgcc cagacggcat
     1681 cgatgtctat ttcgagaatg tcggcggggc ggtttttgac gcggtgctgc cgctgttcaa
     1741 cccgggcgcg cggatgacga tctgcgggtt gatcgcgcat tacggcgatg ctcctggggc
     1801 ggattccaga gcccaggagc gcagccgcgc cgaagctcgc aacgtgcggg tgcggaacct
     1861 ttccgtcggc gagtatgcgg cggactggca cgacgcgttc ctcgccgaga tgtcaccttg
     1921 ggtggcgtct ggcgagatac gttaccgcga ggatattcgc gagggattag aggttattcc
     1981 gaccgccttc gccgagatgc tgcgcggcga gaacttcggc aagaccttgg tccgcgtcgc
     2041 gccggatcca actctcgcgt cgcaacgcgg gtgatttagg tttgatcggg cttctgttgc
     2101 gataatgtcg cgctcagccg cagtagcctt ctgttttggg cagccgagga cgcagccgga
     2161 tctttttgcg aaactccggg gcggcaattg gtcagttggc gtcgaaggtc cacgccacgc
     2221 gcctcgatag ccttcgcgag agttttggta accgcggcgt caacacctgg agccgacctg
     2281 ctgatcggcc accttctgtg acggagttcg atgacggcga cccgggtcgt ggctagttcg
     2341 aaaagaacga gggaattgct aatttcgttc gccaggggaa tccaacgctc cataaggctt
     2401 gatcatcgcg gcgatggtgc ctgtagcgcc gacgtggttc atgatgagat cacgcagcga
     2461 taccctgatg ctgatgtgat ttgttcgacc atgatccacg gctatcctgg ccgcgacgac
     2521 gcgaagcgat gcatatctcg gtacgattga gaagtacggg cgttgcgggt ctgcaacgcg
     2581 atgctccgga tattgtttcg ctacaagact atctttgggg agcggtttca tgcccgtatt
     2641 cagcccctgt gctggccgtt gtgtgcctgg acaatccgcg cgaaactacg atggggcaaa
     2701 gcccgatgga cttcgctgcc ttcactcggg cggcccccag gaggaaagcc catggcgttt
     2761 gtcagatgtt atactggcac ggacggtcag tcacactttg aagatcagga cctgctccca
     2821 tctgatctgg agaggtcgat cgagcaggcc gccagtagta tcactttcac gcgttcaccc
     2881 aacgcccgtt tcagcgattg gcacaatgct ccgcgccgcc agtatgccat tttcctctcc
     2941 ggaggtcaga tggaggtcgt cataggcgat gggacctccc ggcggttcgg ccctggagac
     3001 gccgtcctgt tcgaagacct caccgggcaa gggcacacaa gcaggagcgt cggcggggac
     3061 cgcctgaccg ctatcgtgcc cttggcggat tagccgtcgg gtgtgtctgc ggaacaaacg
     3121 ccgccagcgc tccgcgttcc cccggacgcg aggtcacgtt ccactgtcgg cctcgcgacg
     3181 gcggcaccgc acggaatgcc aggttgaagc ggtcgattag gtcaaggtgc gtatcgcacc
     3241 accaagggac ctggattaag gcgagcgaag ggtagaggga gcggtcagca gccaaaccag
     3301 aaactggaag gaaaaaaaca tggccgagaa gatgcgctac aacaaaatca tcgacattct
     3361 tgagcatggc aaaccggttt tcagcaccag cacggtcccc aacggcaatc tggatgacct
     3421 cacctacatt gctgatgccg actacgacgc ggtcgtcatt gaaatggaac atgagggttt
     3481 tggcttcgcc accctgcgca cctccctgca agtactgctg aaccgcaaaa ggattgcaga
     3541 gaagggcaac ctgcaacccg acgtggtgcc gatggtccgg attcctccga acgcccgcga
     3601 gcgcgaccag tgggtgatca agcaggcgct tgacaccggt gtgtatggtc tggtgctgcc
     3661 ccacctgaac acagtggagg acggtcaggc cgcggtcgcg gcggcacggt atccccaggt
     3721 gccgggggtg caagacttcg caccggtagg ggagcgcggt tggggcaatc gcatcgcctc
     3781 ccgttactgg ggcctgactc cgcaggaata ctacgacgcg gccgaccttt ggccactgga
     3841 ccctgacggt aatattctac tgatgggcat catcgaagaa gccgaagggg tgcggaacat
     3901 acgcgacatt ttgcatcagg tgaggggcat cggcgccatc tgggcaggct ccggcgatat
     3961 gtcggtgtcg atgggattgc gcggcgaggc cggccatcca accgtgcaag aaaatgtgct
     4021 gcgcatcctg gcggcctgca aagagtttgg cgtcccgtgt gcgacgatag ccacggctga
     4081 tgacgttgcg atgcgcctgg agcaaggctt tcgcattatc atgaccgctc cggtgagaag
     4141 tacgccgggg ctggtcgagg ggcgtcgcct cgccgcccgt tagtgccctg tctcttgtgc
     4201 accgcgggag ggcggcaatg atggcgtcac tcagagtctt cctgctgcgc catcaaccca
     4261 cttgggatat ttgatcggga cgtacttgag catcaccctg acgtttgaac attgatcata
     4321 gcgaatggaa tagcagacgg acggcgtagt tgccgatgcc agaatcgttc gtcaccctca
     4381 cgacggacct gcccagggtt gtctctggag gcggctacag gccct
//
LOCUS       DATAVD010000120         4043 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1687183, whole genome shotgun sequence.
ACCESSION   DATAVD010000120 DATAVD010000000
VERSION     DATAVD010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4043
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1687183"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1145)
                     /locus_tag="VHX39_02130"
     CDS             complement(<1..1145)
                     /locus_tag="VHX39_02130"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3989950.1"
                     /translation="MRPNAEDVMDLKGKLRGTLVLPDDDWYDAVRVVWNGMIDRRPGL
                     IARCHGVADVIASVDFARIHGLRVAVRGGGHNVAGYAVCDGGMMIDLSLMRAVRVDPA
                     AHRAWVQGGATWGDVDHETTAFGLATPGGVVSSTGVGGLTLSGGIGWLRQTHGLCVDN
                     LVSVDVVTADGRLLHANDESYADLYWGVRGGGGNFGIVTSFEFRLHPIAPELMFCAPL
                     YPEADAVRIIAAWRDFMAAAPEQLSSLVEFSTIPDADDFPAETRGMRVLAVAAVYDGP
                     ADAGEAAVQPLRELSKPVLDFSGRMSYCAIQSLYDSLFPKGRDRSYFKSAYLASLSDA
                     AILDLVGKWASCPSPKSLTSVWHLGGAVQRVRPDATAFGDRGMSYML"
     gene            1238..2329
                     /locus_tag="VHX39_02135"
     CDS             1238..2329
                     /locus_tag="VHX39_02135"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3989951.1"
                     /translation="MSDAPPQINVAILAVPEVTASTTFAMYDLFAGAGRDWAFITTGV
                     AGVSRMRPYIVAAQKAPVISANGISIIPDFALDECPEPTIVCIPDFSLFPGANCAGSF
                     DLEVAWLRRCHAAGATLASVCTSTSLLAATGLLDGLDATIHWAYTTAITRHYPTVRVH
                     PNRALVVSGIGQRIVMAGGGTSHLDLVLYLIGRFVSLKEALEVSKAYLINWHDAGQQP
                     FATLHESQHSSDGLIAKCQAWIAEHYAEPSPVGAMTKISGLPDRTFIRRFVNSTGMSP
                     LDYVHALRLEEAKQILETEDLSIEAIAEQVGYEDTSFFGRLFRRKVGLTPAQYRLRFG
                     SLRRALQLTTKQPPHAQIMSAGAASSIAK"
     gene            complement(2694..>4043)
                     /gene="mutS"
                     /locus_tag="VHX39_02140"
     CDS             complement(2694..>4043)
                     /gene="mutS"
                     /locus_tag="VHX39_02140"
                     /inference="COORDINATES: protein motif:HMM:NF003810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEX3989952.1"
                     /translation="VRSGLERASAVASQLNASPELPPGLMTAGRDLVTATEGDCGNLV
                     KTLRRALVSEPPISATQPGFIADGYAKRLDARRAEAAQAKEAIENLQSRYVQETGIRT
                     LKIRANAIVGHHVEVPASNSKNLGADFTLRQGLASTTRFTTPELDRLAATLEAATEQM
                     ALAEQAIFTELCSAVLASREALTRIAHAAAAVDLVCGLAQAAAEGMWSEPELVDDTGL
                     TIEGGRHPVAEALLEAEGRTFVANDCRMGETDRLWLLTGPNMAGKSTFLRQVAIIVLM
                     AQVGSFVPATRARLGIVDKMFSRVGASDDLAAGRSTFMVEMLEASAILNQATPHSLVI
                     LDEVGRGTSTHDGLSIAQACMEFLHDVTGCRALFATHFHELADAADVMQHAACMAMDA
                     SAGRYEEMFAYKVVPGRAGQSHGLKVAARAGMPTSVLERAAALLAQHTGQHNDRPSA"
BASE COUNT          758 a         1325 c         1214 g          746 t
ORIGIN      
        1 ctaagcatgt acgacatgcc gcggtcgcca aacgcggttg cgtctggtcg cacacgttgg
       61 accgctccgc ccagatgcca gaccgaggtc agcgatttcg gcgaggggca agacgcccac
      121 ttcccgacca gatccaagat cgccgcgtcg ctgaggctcg ccaggtacgc tgacttgaaa
      181 tagctgcgat cacgtccttt cgggaacagg ctgtcgtaaa gactttggat tgcgcagtat
      241 gacatcctgc cgctgaaatc gagcaccggc ttactaagtt cgcgtaacgg ttggacagct
      301 gcctcacccg cgtccgccgg accgtcatag acggctgcca cggcgagcac gcgcatgccg
      361 cgggtttcag ctggaaagtc atcggcatcg ggaatcgtcg agaactcgac gaggctgctg
      421 agttgctcgg gagccgccgc catgaaatcg cgccacgccg cgatgatccg gaccgcgtcg
      481 gcttcagggt aaagcggcgc gcaaaacatc agctccggtg ctatcggatg aaggcgaaac
      541 tcgaatgatg taacgatacc gaaattcccg ccacctccgc gcacacccca gtacaggtca
      601 gcatagcttt cgtcgttagc gtgcaacagc cggccgtcag ccgttacgac gtccacggag
      661 acaaggttgt cgacacagag gccgtgggtc tgacgcaacc aaccgatgcc gcccgacaag
      721 gtaaggccgc cgaccccggt cgacgacaca acgccacccg gcgtcgcgag accaaaggcc
      781 gttgtctcat gatccacgtc gccccatgtg gcaccgccct ggacccaggc gcggtgcgcg
      841 gctggatcca cccggacagc gcgcatgagt gagaggtcga tcatcatgcc gccatcgcac
      901 acggcgtagc cggcgacatt gtggccgcca ccccggacgg cgacgcgcaa tccatgaatg
      961 cgcgcgaagt ctaccgaagc gatcacgtca gcgacaccat ggcaccgcgc gataaggccc
     1021 ggccgccgat cgatcatgcc gttccagacg acgcggactg cgtcgtacca gtcatcgtca
     1081 ggcagcacca gcgtgccgcg tagcttgcct ttgaggtcca ttacgtcctc ggcattcggt
     1141 cgcatgtcga tctccgctgg aatcaggagt gattgtcgta ggcgggttag gctgcgcctg
     1201 ctaaagccaa aaccacagca atacggtcat ttctgccatg tcggatgcac cacctcagat
     1261 caacgtcgcc attctggccg tgcccgaggt caccgcctcc acgaccttcg cgatgtatga
     1321 cctcttcgct ggcgccggca gggactgggc attcatcacc actggtgtgg ccggcgtgtc
     1381 gcgcatgcgg ccttatatcg tcgccgccca gaaagccccg gtcatttcgg cgaacggcat
     1441 cagcatcata cccgacttcg cgctcgatga gtgcccagaa ccgactatcg tatgcatacc
     1501 cgacttctcg ctcttcccgg gcgccaactg cgccggcagc tttgatctcg aggtcgcctg
     1561 gctgcggcgg tgccatgccg ccggcgctac gttggccagt gtctgcacga gcaccagttt
     1621 gcttgccgcg accggactgc tcgacggcct ggatgccacc atccactggg cctacaccac
     1681 ggcaatcacg cggcactatc ccacggttcg cgtgcatccc aaccgtgctc tggtcgtcag
     1741 tggcatcggg caacgcattg tcatggcggg cggcggcacc agccatctgg acctggtatt
     1801 gtacctgatc ggccgctttg tcagtttgaa ggaagcgctg gaagtctcga aagcttatct
     1861 catcaactgg catgacgccg gccagcaacc attcgccaca ctccatgaaa gccaacattc
     1921 gagcgacgga ttgatcgcca aatgccaggc atggatcgcg gagcattatg ccgaaccgtc
     1981 cccggttggt gcgatgacga agatatcggg tttaccggat cgcacattca ttcgccgctt
     2041 cgtcaattcc accgggatgt cgcccctgga ttatgtccat gcgcttcggc ttgaggaggc
     2101 caagcagata ctggaaaccg aggatctatc gatcgaagca atcgcggagc aggttggtta
     2161 cgaggacacc agcttcttcg gccgcctgtt ccgccgcaaa gttggcctta ctccggcgca
     2221 gtaccgattg cgcttcggat cgctgcggcg ggccttgcag cttacaacga aacagccacc
     2281 tcatgcacag atcatgtcag cgggggctgc ttcgtcgatc gccaaatagt gtccgcctgc
     2341 tcagagctgt gtttggcccg agttccgaga gcattcgctt cgggtctccg ccgcggcgga
     2401 ccgttgaaga ggactttggc aaaccactga agtcgacttt ggaaaatgac acgtcctgag
     2461 cttcgatcac cgtccgggaa agcggctcga tcgcctgatt gaacacggcg atggcggcgt
     2521 tcagcgcctt ggttttctcg cgaatgtcag ccgccagagc atcgcgtgcg gccaattgtt
     2581 gcttgctgag cctgaaagcc gcggatcgtc ttttcatacc cgtccgatga tgtggattgg
     2641 tcaaggtgaa ccgccgcgag caccagggca atcgggtgaa acagacactg aaattaggcg
     2701 ctcggcctat cgttgtgctg tccggtgtgt tgcgccaaca gcgcggccgc gcgttccagg
     2761 acggaggttg gcatgcctgc ccgcgccgcc accttcagcc cgtgagattg gccagcgcgg
     2821 ccgggcacga ccttgtaggc aaacatctcc tcatagcgtc ccgccgaggc gtccatcgcc
     2881 atgcacgctg cgtgctgcat cacgtccgcc gcatccgcaa gttcgtggaa gtgcgtcgca
     2941 aacagggctc ggcatcctgt gacgtcgtgc aggaactcca tgcaagcttg ggcgatcgaa
     3001 agtccgtcgt gcgtcgacgt cccccgcccc acctcgtcga ggattaccag cgagtgtggg
     3061 gtggcttgat tgaggatggc cgatgcctcc agcatctcga ccatgaaggt cgaccgcccc
     3121 gccgccaagt cgtcggacgc gccgacacgg ctgaacatct tgtccacaat gcccagccgg
     3181 gcgcgggttg cgggcacgaa ggatccgacc tgggccatca gcacaatgat cgccacctgc
     3241 cgcaggaacg tcgactttcc tgccatgttg gggccggtca gcagccaaag gcggtccgtt
     3301 tcgcccatcc ggcagtcatt ggcaacgaag gtgcgcccct ccgcctccaa cagtgcctcc
     3361 gccacgggat ggcggccccc ctcgatggtc aggcccgtat cgtcaaccag ttcgggctcc
     3421 gaccacatcc cctcggcggc cgcctgcgct aggccgcaca cgaggtccac cgccgccgcg
     3481 gcgtgcgcga tccgggtcag cgcctcgcgc gacgccagaa cggccgagca gagttcggtg
     3541 aagatggcct gctcagcgag agccatttgc tcagtcgcgg cctccaacgt tgcggcaagc
     3601 cgatccaact caggggtggt gaagcgagtg gtggaagcta agccctggcg aagggtaaag
     3661 tccgcgccga gattcttcga gtttgaggcc ggcacctcga cgtggtggcc cacgatcgcg
     3721 ttcgcgcgga tcttcagcgt cctgatgccc gtttcctgaa cgtagcgcga ctgaaggttc
     3781 tcgatcgctt ccttcgcctg ggcggcctcg gcccgcctcg catccagccg tttggcatag
     3841 ccgtcagcga tgaatccagg ctgggtggcc gatatcggcg gctccgacac tagagcgcgc
     3901 cgcagggtct tgacgaggtt gccgcagtct ccctccgtcg cggtcaccag gtcccgtccg
     3961 gccgtcatta gcccgggcgg caattcgggc gacgcgttca gctgcgaggc tacagccgac
     4021 gcccgttcaa gaccgctgcg cac
//
LOCUS       DATAVD010000121         6901 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3548938, whole genome shotgun sequence.
ACCESSION   DATAVD010000121 DATAVD010000000
VERSION     DATAVD010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6901
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3548938"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1253)
                     /locus_tag="VHX39_02145"
     CDS             complement(<1..1253)
                     /locus_tag="VHX39_02145"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989953.1"
                     /translation="MDPIVGSGKYTYDVNENWARVPPGIDMKPAAVAVDSRDRVFCFN
                     RSNEHPVVIFDRDGNFESSWGAGLFRFPHAIRIDEHDNVWLTDEHHGQFMLFTNDGKL
                     LRTIGVAGQRSNTGVPGDDFTAVAWKKVTQGAGPFNLPTDITVVPGGDMYMTDGYGNA
                     RVHKFSADGTYQFSWGEPGKNPGQFNLPHGIWYDSRGRLLVADRENDRVQVFDLAGNL
                     LTVWPTELIGPAFFYVDDEDVVYIPEHNGGMFSIVTLDGERLARWGAPIHRSIHGVWG
                     DSERSIYVVQPGDWGRVRRVVKYSRRDQAPISRRATSQARAATEPAANRVALITGCGK
                     PVGIGASTARALAAAGVTVVVADVAPTGLANEHNVQGDVDPSWRGVDSLVEEIESAGG
                     QASCTIGDVSREDDARRMVDTVLAR"
     gene            1516..2910
                     /locus_tag="VHX39_02150"
     CDS             1516..2910
                     /locus_tag="VHX39_02150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989954.1"
                     /translation="MDKQVLLDEISSFCRAAGMAETTFGRRAVNDGKLISRLRFGGRV
                     TTETLDRVRAFMSQPATPRSTVRVSQPRHGANGHHAPLPAGDAEAAAKGFRFYDNRQK
                     YLSFVTTCGEKWAVADRVSEELANIHPRPPALRVFDAGTGEGTVLTRVMRSMHARFPT
                     MPFYIVGKEISLEDIRLVLEKMADRFYEHPATVLVLTNMNYAEAPWLKPRSVTAATSM
                     VWHEERLRGTTSRDFEEQITRLQPFLSENWTARVSKTSGNPVYEKPVVLVLYRDDYRF
                     LLDHVRPRRGVSVAEYDMVIASQPYRARASAEFKAAKVLTPLARALAPGGRLIGIHSH
                     GNDPGLEIVRKVWPGENPFTTDRHILLRATKAELGRDARDLNFNSYADNRALFRYGMH
                     TLPSEISGTIGTSTLFAAWNAAIYVAQIEDERLSEAVVSGRWLEATSDVLRQHHGLWF
                     CDESYVISRKRDVV"
     gene            2912..3817
                     /locus_tag="VHX39_02155"
     CDS             2912..3817
                     /locus_tag="VHX39_02155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989955.1"
                     /translation="MALANAAIKDDRAAIMALVSGGSLEMSPRERDAIPAAAEYLPLG
                     AEVFVSAPPAVSHHDIVSAAVALRRRGFEPVPHVAARSLVGFTQLNDLLARVAGEAGV
                     GRALVIGGDLDPPSGPFHASFDVLSLGLFEKYGFTRIGLAGYPEGHPRIAQPALDQAL
                     AAKLALLRQAGIAAHVVSQFVFHATPVLDWLQALRAAEPLLPVRIGLAGPAGIATLAR
                     YAVRCGIGHSINALTRHGTSIARLVTEAGPESVLRQLAVAEPNISGIHLFSFGGLPRT
                     ARWLRAVTDGNFRIAEDGQGFAVAD"
     gene            complement(3833..5545)
                     /locus_tag="VHX39_02160"
     CDS             complement(3833..5545)
                     /locus_tag="VHX39_02160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stimulus-sensing domain-containing protein"
                     /protein_id="HEX3989956.1"
                     /translation="MPDGGTIERLKPTKRTPLRRFRQRWVSPLLRRILMVNALPLALL
                     VVALLYLDQYQNGLLEAEVSALREQAKIYAGAIGESAVLATDPDNPHLVPEIARPLLR
                     RLTDPTPDARARLYAPDGTIVADSQVHEGSGATPGGLPLPPINRGLVLSFVGQVYDYV
                     LSLLPHNNPVATVDITPGARGPDWQPDVKEELRLQSAGDSREMPPYIRRTVDNRLWIT
                     VAEPVERDKRTVGIVLLTREAREVEQSLLSVRLSIIALFGLALGLTVLLSWYLSLTIA
                     RPILRLADAASDMREGKGRTGSVSTSLLKRRDEVGELANAVSDSASALWARMDATEQF
                     AADVAHELKNPLSSIRSAIETLPRIEDAARRNQLLTIIGQDVMRLDRLISDVSDASRV
                     DAEMSRVTARPVDVVPIVRTLKELDDATRDPDNDPGLEVIAPPAGMQVLAVEDRLVQV
                     LRNLIGNAHSFSPPKGRILVRVKDLGVQLGGEQVEISVEDQGPGIPEANLEHIFDRFY
                     SERPHGEKFGQHSGLGLSISRQIVEALHGQISAENVRDASGKVLGARFIVRLPKANAA
                     LQKA"
     gene            complement(5546..6247)
                     /locus_tag="VHX39_02165"
     CDS             complement(5546..6247)
                     /locus_tag="VHX39_02165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3989957.1"
                     /translation="MKQTIALVDDDRNILTSVSMTLEQEGYQVRTYTDGESALQGLTA
                     KPVDLAVLDVKMPRMDGMELLQRLRQRSTMPVIFLTSKDEEVDELMGLRLGADDYITK
                     PFSQRLLLERIRALLRRNEASRAEGSGAAPGGVMTRGELVLDETKHQCLWKSQDIQLT
                     VTEFLLVKALAARPGMVKSRDQLIDAAYGENIYVDDRTIDSHVKRVRKKFRSVDDSFN
                     QIETLYGIGYRYKER"
     gene            6345..>6901
                     /locus_tag="VHX39_02170"
     CDS             6345..>6901
                     /locus_tag="VHX39_02170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX3989958.1"
                     /translation="MADEVRDTAFEARKLLRAARSGTLATVADGGQPFASLVTHACAP
                     DLSVLLLLSNLSEHTRHLRADPRCSILACGGAEGTNPQTAPRVTVTGIAEVADDPVLK
                     ARFLAVHPYAAVYADFGDFHLWRMRPMGALFVGGFARAVRLRQAELAPDADAVAAIAA
                     AESGIIGHCNNDHADALAAIAATPG"
BASE COUNT         1187 a         2150 c         2213 g         1351 t
ORIGIN      
        1 taacgagcca gtaccgtatc gaccatgcgg cgcgcgtcgt cctcccggct gacgtcgccg
       61 atcgtgcagg aggcctgacc gccggcggac tcgatctcct cgaccagact gtcgaccccg
      121 cgccacgacg ggtcgacgtc gccctgcaca ttgtgttcgt tggcgaggcc ggttggcgcg
      181 acatccgcca ctacaaccgt gaccccggct gccgccagtg cccgtgcggt cgaggctccg
      241 atgccaacgg gcttgccgca tccggtgatc aaggcaaccc ggttcgccgc cggttcggtc
      301 gccgctcgcg cttgggaggt tgcgcgtcgc gaaatgggtg cctgatcgcg tctgctgtat
      361 ttcacaaccc ggcggacccg gccccagtcg ccgggctgca cgacatagat gctcctttcg
      421 gaatcgcccc agaccccgtg gatcgagcgg tggatcggtg caccccaacg cgccagccgc
      481 tccccgtcca gggtgacgat actgaacatg ccgccgttat gttccgggat gtaaacaaca
      541 tcctcgtcat cgacataaaa gaatgcggga ccgatcagtt cggtcggcca gaccgtgagc
      601 agattgccgg cgagatcgaa cacctgcacc cggtcgtttt cgcgatccgc gaccagcagc
      661 cggccgcggc tgtcatacca gatgccgtgc ggcagattga actgacctgg atttttgcca
      721 ggctcgcccc aggaaaactg gtaggtgccg tcggcggaga atttatgcac acgggcgttg
      781 ccgtaaccgt ctgtcatata catgtcgccg cccgggacga ccgtgatgtc ggtgggcagg
      841 ttgaacggcc cggcgccctg cgtcactttc ttccaggcga cagcggtgaa atcgtctccc
      901 gggaccccgg tgttcgagcg ttggccggcg acgccgatgg tgcgcagcag cttgccgtcg
      961 ttggtgaaca gcatgaactg gccgtgatgt tcatcggtga gccaaacgtt gtcgtgctca
     1021 tcgatccgga tggcgtgcgg aaagcggaac aatccggcac cccacgagct ttcgaaattt
     1081 ccgtcgcgat cgaagatcac caccggatgt tcgttggagc gattgaaaca aaacacccga
     1141 tcgcgcgagt cgaccgcgac cgcggcgggc ttcatgtcga tgccaggcgg cacccgagcc
     1201 cagttttcgt tgacgtcata ggtgtatttg ccgctgccga cgatggggtc catcacgccc
     1261 tcctggggtt cttttgctcg gtcccgaagc tggtttgacg ggaacctcgg cgttacctcc
     1321 gggcgttgaa ccggtctctg tctcgccccc cggtatataa aggttttgtg ccggaaccgc
     1381 ggcccgggtc aagcccgaac cacgccggcg ggtgttgggc aattgcccac tatatgtccc
     1441 acccgcgcag tgggcaataa tgtggtttac catttgcccc aatccggttc caatccaggc
     1501 gcggaggata acagcgtgga caagcaagtc ctgctcgatg agatctcgag cttctgccgc
     1561 gcggcaggca tggcggaaac gacctttggc cggcgcgcgg tcaatgacgg caagctgatc
     1621 agccggctcc gtttcggtgg ccgggtcacg accgaaacac tcgaccgggt ccgcgctttc
     1681 atgagccaac ccgcgacgcc acgctcgacg gttcgcgtgt cgcagcccag acatggcgcc
     1741 aacggccatc atgcgccact gccggcgggc gacgccgagg ctgcggcgaa gggcttccga
     1801 ttctacgaca atcgccagaa gtacctgtca tttgttacga cctgtggcga gaaatgggcg
     1861 gtcgccgacc gggtcagcga ggaactggcc aacatccatc cgcggccgcc ggcattgcga
     1921 gtgttcgacg caggcaccgg cgagggtacc gtgctgaccc gcgtcatgcg ctcaatgcac
     1981 gcacggtttc cgaccatgcc gttttatatc gtcggcaagg agatcagcct cgaggatatc
     2041 cgtctcgttc tcgaaaagat ggcggaccgc ttttatgaac atccggcgac cgtgctggtg
     2101 ctgaccaaca tgaattacgc ggaggcgccg tggctgaagc cacgttcggt caccgccgcc
     2161 accagcatgg tctggcacga ggagcggttg cgcggcacca cgtcccgcga tttcgaagaa
     2221 cagattactc ggctgcaacc tttcctcagt gagaactgga cggcgcgtgt cagcaagacc
     2281 agcggcaacc cggtgtatga aaagccggtc gtgctggtgc tgtaccgtga cgattaccga
     2341 tttctgctgg atcatgtgcg gcccagacgc ggggtgtcgg tggcggagta tgatatggtg
     2401 atcgcttcgc agccgtatcg ggcgcgcgcc agtgccgagt tcaaggcagc caaggtgctc
     2461 accccgcttg cccgtgcatt ggctccgggc ggccggttga tcggtatcca ttcgcatggc
     2521 aacgatcccg gcctggagat cgtccgcaag gtgtggcctg gcgaaaatcc cttcaccacc
     2581 gaccggcaca tcttgctccg cgccaccaag gccgaattgg gccgtgacgc acgcgatctg
     2641 aatttcaatt cgtatgccga caaccgcgcg ttgtttcgtt acggaatgca tacgctaccg
     2701 agtgaaatca gtggcacgat cggcacgtcg acattgttcg cggcgtggaa cgcggcgatc
     2761 tatgtggcac agatcgagga cgagcggctg tccgaagctg tggtgagcgg tcgctggctg
     2821 gaagccacca gcgacgtgct gcggcaacat cacggccttt ggttctgcga cgaatcctac
     2881 gtgatctcgc gtaaacggga tgtggtgtga catggcactg gcgaatgccg cgataaagga
     2941 cgatcgggcc gccattatgg cgctggtttc cggtggttcg ttggagatgt cgccgcgcga
     3001 acgcgacgca atccctgccg cagccgaata tttgccactg ggtgctgagg tcttcgtcag
     3061 tgcaccaccc gccgtcagcc atcacgacat cgtgagcgcc gcggtcgcct tgcgccggcg
     3121 cggcttcgag ccggtgcccc atgttgcggc acgcagcctc gttgggttca cgcaactgaa
     3181 cgacctgctg gcccgcgtgg ccggcgaggc gggggtcggg cgggcattgg tgatcggcgg
     3241 cgatctcgac ccgccgtccg ggccgttcca cgccagtttc gacgtgcttt cattgggctt
     3301 gttcgaaaag tacggcttta cccgcatcgg cctcgcagga tatcctgagg gtcatccgcg
     3361 catcgcgcag cccgcgctgg accaggcact tgccgccaag ctggcactgc tgcgacaggc
     3421 cgggatcgcg gcccatgtgg tttcgcaatt cgtgttccat gcaacgccgg tgctggattg
     3481 gttgcaggcg ttgcgggccg ccgaaccgtt gttgcctgtg cgcatcggtc tggccggtcc
     3541 cgccggaatc gcaacgctgg cgcgttacgc ggtacgctgc gggattgggc attcgatcaa
     3601 cgccctgaca cggcacggaa cgtcaatcgc gcggctggtc accgaagccg gaccggaatc
     3661 cgtgctgcgg caactggcgg tggcggagcc gaacatatcc ggcatccatt tgttcagctt
     3721 cggcgggtta ccgcgcaccg cgcggtggct gcgggcggtg accgacggca atttccgtat
     3781 cgccgaggac ggccaggggt tcgcggtggc ggattgacgt catcgtcgct ggtcacgcct
     3841 tctgcaaggc tgcattcgct ttcggtagcc gaacgatgaa gcgcgcgcca agcaccttgc
     3901 ccgatgcatc acgcacgttc tcggctgaga tttggccgtg cagagcctcg acgatttggc
     3961 ggctgatcga cagccccaac ccggaatgct ggccgaactt ttcgccgtgc ggacgttcgg
     4021 agtaaaaccg gtcgaaaata tgttccaggt tcgcctccgg tatgcccggc ccctgatctt
     4081 cgacgctgat ctccacctgt tctccgccca actggactcc caggtctttg acccgcacca
     4141 gaatgcgtcc ctttggcgga ctgaaggagt gcgcgttgcc gatcaggttg cgtagcacct
     4201 gcacgagcct gtcttcgacc gccagcacct gcatcccggc cggaggtgcg atgacctcga
     4261 ggccaggatc gttgtctgga tcacgggtgg cgtcgtcgag ctccttgagg gtgcgtacga
     4321 tcggcacgac atcgaccggc cgcgcggtga cccgtgacat ttcggcatcg accctggagg
     4381 catcgctgac gtcgctgatc agccggtcga gccgcatcac gtcctggccg ataatagtca
     4441 gcaactggtt gcgccgtgcc gcatcttcga tccgcggcaa ggtttcgatt gcgctgcgaa
     4501 tcgacgacag cggattcttc agttcatgcg cgacgtcggc ggcgaattgc tcggtcgcat
     4561 ccatccgcgc ccacaaagcg ctggcggaat cagaaacggc gttggccagt tcgccgacct
     4621 catcgcgccg cttcagcaac gaggtcgata cgctgccggt gcggcctttg ccttcccgca
     4681 tgtcgctcgc ggcatctgcc agccggagga tcggccgtgc aatggtcagc gacaaatacc
     4741 acgacagcag cacggtcagc ccgagtgcga ggccaaacag cgcgatgatc gacagccgaa
     4801 ccgacagcag gctttgttcc acttcgcgcg cctcgcgggt caacaggaca atgccaaccg
     4861 tgcgcttgtc gcgttcgacc ggttcggcca ccgtgatcca caaccggttg tcgacggtgc
     4921 gacggatata gggcggcatt tcgcggctgt cgccggcgct ttgcaggcgc agctcctcct
     4981 tcacatcagg ttgccagtcc ggtccgcgtg cgccaggcgt gatatcgacg gttgcgaccg
     5041 ggttgttatg gggaagtaat gacagaacgt aatcgtagac ctgaccgaca aacgacagga
     5101 ccaggccgcg attgatcggt ggcagcggca gtccgccggg cgtggcgccc gatccctcgt
     5161 gtacctggga atccgcaacg attgtgccat ccggtgcgta aagtctggcg cgcgcgtcag
     5221 gggtcggatc ggtcagcctg cgtaacagcg gacgagcgat ttccggcacc agatgcgggt
     5281 tgtccgggtc ggtcgccagc accgcacttt cgccgatcgc gccggcgtaa atcttggcct
     5341 gctcacgcaa tgccgagacc tcggcttcca gcaggccgtt ttggtattga tccagataca
     5401 gcagagcaac gaccagcagt gccagcggca acgcattgac catcaggata cgccgcagca
     5461 gcggcgatac ccaacgttgc cggaaccgcc ggagcggggt gcgtttggtc ggcttcagtc
     5521 gctcgatggt gccgccatct ggcacttagc gctccttgta ccggtagccg atgccgtaga
     5581 gcgtttcgat ttgattgaag ctgtcgtcga cggagcggaa cttcttgcgt acccgtttga
     5641 cgtgactgtc gatggtgcgg tcatcaacgt agatgttctc gccgtacgcc gcgtcgatca
     5701 attggtcgcg gcttttgacc ataccgggcc gtgcggcgag cgctttgacc agcaggaact
     5761 cggttacggt cagttgaatg tcctgacttt tccacaggca ttggtgcttg gtttcatcca
     5821 gcaccagctc gccgcgggtc atcacgccgc ctggcgccgc gcccgagcct tccgcccggc
     5881 tcgcttcatt gcgtcgcagc aaggcgcgaa ttcgctccag caacaggcgc tggctgaacg
     5941 gcttggtgat gtagtcgtct gcgcccagtc gcagacccat cagttcgtcg acctcctcgt
     6001 cctttgaggt caggaaaatc actggcatgg tgctacgctg acgcagccgc tgcagcagtt
     6061 ccattccatc catgcgcggc atcttgacgt cgagcacggc gaggtcgacg ggtttggcgg
     6121 tcaggccctg taacgcgctc tcaccatcgg tgtaggtgcg gacctgatag ccttcctgct
     6181 ccagcgtcat ggacacgctg gtgagaatgt tgcggtcgtc gtcgaccagg gcgatcgtct
     6241 gcttcatggc ggtgcgtcct ttgcaggcgt gcttccggcg attccccgga tgaggcaatc
     6301 ttacacccaa ttgtggcgca accaggacgt gaggtgaaca aaaaatggcg gacgaggttc
     6361 gcgacaccgc gttcgaggcc cgcaagctgc tgcgtgcggc gcggtcgggc acgctggcga
     6421 ccgtcgccga tgggggtcag ccgtttgcct cgctggtgac ccatgcctgc gcgccggatt
     6481 tgtcggtgtt gctgctgctg tcaaatttgt ccgagcatac caggcatttg cgggccgatc
     6541 cgcgctgctc gatcctggcg tgtgggggcg cggagggtac caatccgcaa accgcgccgc
     6601 gggtgacggt gaccgggatc gccgaggtgg cggatgaccc ggtgctaaag gcacgctttc
     6661 tggcggtgca tccttacgcg gcggtttatg ccgatttcgg cgattttcat ttgtggcgca
     6721 tgcggccgat gggcgcgctg ttcgttgggg gcttcgcgcg agcggtgcgg ctgcggcagg
     6781 ccgagctggc accggatgcc gacgcagttg ccgcgatcgc ggcggcggag agcgggatta
     6841 taggacattg caataacgat catgccgatg cgctggccgc catcgccgca acgccgggag
     6901 a
//
LOCUS       DATAVD010000122         1786 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_757251, whole genome shotgun sequence.
ACCESSION   DATAVD010000122 DATAVD010000000
VERSION     DATAVD010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1786
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_757251"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..701)
                     /locus_tag="VHX39_02175"
     CDS             complement(<1..701)
                     /locus_tag="VHX39_02175"
                     /EC_number="1.8.5.3"
                     /inference="COORDINATES: protein motif:HMM:NF016838.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0019645 - anaerobic electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DmsC/YnfH family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEX3989959.1"
                     /translation="MHPAYSVIFFTTATGAGYGLIALLGLLAGFGLIQPGFWFGMVSF
                     GLAVGLICAGLLSSMGHLGHPERAWRAFSQWRSSWLSREGVASVLTFGPISLLVLCWV
                     VLGRSGGWVAAIGIVTTLCAAITVASTAMIYASLKPISQWNNYFTLPSYLLYSAMSGL
                     VLLNAIMHAFGRSSTPWLTAAIVFTLFGWGWKLATWRHNDEVPMASDLNSATGLAGGT
                     VRSVEWPHTEANYLL"
     gene            complement(713..1447)
                     /locus_tag="VHX39_02180"
     CDS             complement(713..1447)
                     /locus_tag="VHX39_02180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX3989960.1"
                     /translation="MTCIPGTTEKSLGLVIDLDSCVGCQACVTSCKEWNTGGHMAPLT
                     DIRPYDGGVDGVWFNRVHTYEQTTDAGSRTVHFPRSCLHCAEPACVTVCPTGASFKRA
                     SDGIVLVNEDKCIGCKLCSWACPYGAREFDTDVGVMKKCTLCVDRIYNENLPETDRVP
                     ACVAACPTSARHFGDLADPNSAVSRLVEDRGGVALMPELGYRPTNRYLPPRARQSNAV
                     TSDVPPLSHVSPEGGFLGWVDRLLSI"
     gene            complement(1444..>1786)
                     /locus_tag="VHX39_02185"
     CDS             complement(1444..>1786)
                     /locus_tag="VHX39_02185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="formate dehydrogenase"
                     /protein_id="HEX3989961.1"
                     /translation="EQNTVWTWNAIGKRNGSWALKKDAAEHTRGFLLNHAIGDLLPAN
                     EHGRRYSNSDPVTGQAAWFDLRVRIRKCAPEEVGFTAPQFDKLPLPPGISPAPQKLSF
                     GAQFKRKVMAR"
BASE COUNT          384 a          542 c          545 g          315 t
ORIGIN      
        1 ttcagaaggt agtttgcttc cgtgtgcggc cattccaccg atcgcactgt tcctccggca
       61 agaccggtag ccgaattgag atcggaggcc atcggaactt catcgttgtg gcgccatgtc
      121 gcaagtttcc atccccaacc gaagagggtg aagacaatgg ctgctgtcag ccatggcgtc
      181 gaagaccgcc caaacgcgtg catgatcgca ttgagcagaa ccagtccact catcgcggaa
      241 taaaggaggt agcttggcaa ggtgaaatag ttgttccatt gcgaaatggg tttcagcgac
      301 gcgtagatca tcgccgtcga cgccacggtg atcgcggcgc aaagcgtggt cactatgccg
      361 atcgcggcga cccagccgcc gctgcggccc agcacgaccc agcagagcac caggaggctg
      421 atcggcccga aagtcaaaac ggacgcgacg ccctcgcgcg acagccagga actgcgccac
      481 tggctgaacg cccgccaggc cctctcagga tggccgagat gacccatcga tgacaaaagc
      541 cccgcgcaga tcaaaccaac ggcgagaccg aagctcacca tgccgaacca gaaacccggc
      601 tggatcaggc cgaagcccgc gagcagacca agcagagcga tgaggccgta gccggcgccc
      661 gtggccgttg tgaagaagat gacggaataa gcaggatgca tgatgatctg aactaaatcg
      721 agagaaggcg atcgacccag ccgaggaatc cgccctcggg agagacatgg cttaagggcg
      781 gaacgtcgga ggtgacagcg ttggactggc gcgcgcgcgg cggcagatag cggttggtcg
      841 gccgatatcc aagctcgggc atcaaagcga cgccgccgcg atcctcgacc agccgcgaca
      901 ccgccgaatt cggatcggcg agatcgccga aatgccgcgc actcgtcggg cacgccgcaa
      961 cgcaggcggg cacacggtct gtctccggca gattttcatt ataaatccgg tccacgcaga
     1021 gcgtgcattt cttcatgaca ccgacatcgg tgtcgaactc gcgggctcca tagggacacg
     1081 cccagctgca taatttgcag ccgatgcact tatcttcgtt caccagcacg atgccgtccg
     1141 acgccctctt gaaagaggcg ccggtcggac agacggtgac gcaagcgggc tccgcacaat
     1201 gcaggcacga gcgcggaaaa tgcacggtgc ggctgccagc gtcggtcgtc tgttcatagg
     1261 tgtgcacccg attgaaccag acaccatcga cgccgccgtc atagggccgg atatcggtca
     1321 gcggtgccat atgtccgccg gtgttccact ccttgcagga ggtcacgcaa gcctggcagc
     1381 cgacgcagct gtcgagatcg atcacgagtc caaggctttt ctcggtcgtg cccgggatac
     1441 aggtcatctt gccattactt tccgtttgaa ttgtgccccg aagctcaatt tctgtggcgc
     1501 tggactgatc ccaggcggca gcggcaattt gtcgaactgc ggcgcggtga atccgacctc
     1561 ctccggcgcg cacttcctga ttctgacacg caggtcgaac caggccgcct ggcccgtcac
     1621 cgggtctgaa ttcgaatagc ggcggccatg ttcattggcc ggcagcagat cgccgatggc
     1681 gtgattgaga aggaagccgc gggtatgttc ggcagcatct ttcttgaggg cccatgagcc
     1741 gttgcgtttg ccgatcgcat tccaggtcca gacggtgttt tgttcg
//
LOCUS       DATAVD010000123         1584 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_757332, whole genome shotgun sequence.
ACCESSION   DATAVD010000123 DATAVD010000000
VERSION     DATAVD010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_757332"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VHX39_02190"
     CDS             complement(<1..222)
                     /locus_tag="VHX39_02190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989962.1"
                     /translation="MPNILTVFHHWFRPGIRLAIPLAMGMLVTGCSMFDSINRTLFGG
                     GPTPGQQGYVKGFLGEVVADEPRAALLGKE"
     gene            698..1450
                     /locus_tag="VHX39_02195"
     CDS             698..1450
                     /locus_tag="VHX39_02195"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEX3989963.1"
                     /translation="MLFHRCALLLACLLISGTALFPVPTWADAFTSAQRAEIIAIIRD
                     ALKRDPSLLRDAVVALQTDDAEREKTASRGAVLSAKGALVTEDDPVVGNPRGNVTIVE
                     FFDVRCPYCRKLEPEMSAFLAADHNVRLVYKDLPILGPASVVGTKALLAARKQDAYVR
                     LRDAVMRMPPDITRAGIETEAKKLGLDTARLLRDMDDPSIQTQIDANLRLAQRLNIQG
                     TPAMVVGNDLLSGAVDTAELKAAVAQARSAKE"
BASE COUNT          295 a          509 c          469 g          311 t
ORIGIN      
        1 ctctttcccg agcagtgccg cgcgcggctc atcggccacg acctcaccca ggaagccttt
       61 gacgtagccc tgctggcccg gtgtcggccc accgccgaat aacgtgcggt tgattgaatc
      121 gaacatggag cagccggtca ccagcatccc catcgccagc ggaatcgcca gacgtatgcc
      181 cgggcgaaac caatgatgga aaaccgtcag gatattcggc atgccacacc ggcgtctgct
      241 ttcgccgcca gcattcgtcc taggtttcgg cgccattccc gtccctggtc tccatgtgtc
      301 agcctggtcg cgggatcagg cacccgaagc gcaaatcgaa ccaagacttc gaaccgcgtg
      361 agcggcgttc tgcctcggcg cggccggcct ctcaatcgga ctggtccgca gttttctggt
      421 tcttgatcgt gccataaacg gcttcgccag caccggcaac cggatgttgg atttgcaggg
      481 cggcctcagc gtatcgtagg tcataacctc ggcaggtcag gccgcccaga ttggcgtcgc
      541 accgccgtcc ggttcgccgt agtgagccac cctgcaactt gtgcaatatg aatgtatgac
      601 attgcgccta acctgctgct ggtctgctat aagctgctcc gccgcgttct cccgttcgcg
      661 ggatcagggc caaggccgtc acgaaagaaa attcttcatg ttgttccatc gctgcgcctt
      721 gttgttggct tgcctgctga tctccggcac ggcgctgttc cccgtcccca cctgggctga
      781 cgcgttcacc agcgcacaac gcgccgaaat catcgccatc attcgcgatg cgctgaagcg
      841 tgacccttcg ctgctgcgcg atgccgtcgt ggccctgcag actgacgacg cggaacgcga
      901 gaagaccgcg tcacggggag cggtcctgtc cgcaaagggt gctctggtca ccgaggacga
      961 tccggtcgtc ggcaatcccc ggggcaacgt gacaatcgtg gagttcttcg atgtccgatg
     1021 cccatattgc cgcaagctgg aacccgagat gtcggcattc ctcgccgccg accacaacgt
     1081 ccgtctggtc tacaaggatt tgccgatcct cggtccggca agcgtcgtgg gcaccaaggc
     1141 tctcctcgcc gcacggaagc aggacgccta tgtcaggctg cgtgatgcgg tgatgcgtat
     1201 gccgccggac atcacccgtg cggggattga gacggaagcc aaaaagcttg gcctcgacac
     1261 cgcccggctg ctgcgtgata tggacgatcc atcgattcaa acgcagatcg atgctaatct
     1321 tcgtcttgcc caaaggctca atattcaagg cacaccggcg atggttgtcg gtaacgattt
     1381 gctgtccggc gcggtcgaca cggcggagtt gaaagcggcc gtcgcgcagg cgcggtccgc
     1441 aaaagaatag ccggagtggg ttccgccacg atggcagtac cagacactta agcggacgca
     1501 gctatacgtt gaccggaggt tccttcaccc tccgttgcac agtgcggcgg ctgcgcactg
     1561 ccggaggcct tagcgaacgg ccag
//
LOCUS       DATAVD010000124         2689 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3362508, whole genome shotgun sequence.
ACCESSION   DATAVD010000124 DATAVD010000000
VERSION     DATAVD010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2689
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3362508"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..869
                     /locus_tag="VHX39_02200"
     CDS             <1..869
                     /locus_tag="VHX39_02200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX3989964.1"
                     /translation="PDSQGIMRGLDADSCRAVAAAALGDAGKTKFVITSTQNRFTALQ
                     SGEIDLLARSTTWTLTREGGLGLEFAWVNYYDGTGFLVKTASGVKSAKELDGATICVQ
                     PGTSTELAISDYFRLHDLKYTPIEIGDLTEIQGAFMSGRCDAYSTDSSALAAFRFSQG
                     PKAEDLLLLPEIISKEPLGVMVRKGDDKWFDIVRWTFAAMITAEEKGITSQNIDKFMD
                     SKDPDIRRLLGVEGDMGKQLGVDPKWAYNVIKQVGNLEELWDRNIAPMGAPRGLNNIW
                     TKGGLQYAPPLR"
     gene            912..2123
                     /locus_tag="VHX39_02205"
     CDS             912..2123
                     /locus_tag="VHX39_02205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX3989965.1"
                     /translation="MSDATIDPRLTTGHEAPKHALRFSWSDPRFRAIVWQVVILGGVA
                     AIAWYLIANTSRNLESRHIATGFGFLDRTAGIPIGESLISYNPAVDTFGRALFIGLLN
                     TLKVSVIGIVLATILGTLIGIGRLSRNWLVARLTAFYVETIRDLPLLLQLLFWYTILQ
                     SLPAPRKAISIGGAVYLSNRGLKLPALDWEFAHTAALLALLAGAVGTWLWTRHARQRQ
                     EASGVRPRVLPVALALLVGLPFVVWAALGAPWHWDVPALHGFNFMGGANVSPEFFALL
                     LGLVTYTAGYIAEIVRSGIQAVPLGQWEAAGALGLKRGAVLQRIVLPQALRVIIPPMT
                     SQYLNLTKNSSLAVAIGYPDLVSVANTTLNQTGQAIEGVAVIMAVYLTISLSISLFMN
                     WYNSHIALVER"
     gene            2127..>2689
                     /locus_tag="VHX39_02210"
     CDS             2127..>2689
                     /locus_tag="VHX39_02210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX3989966.1"
                     /translation="MSMTQSLAPSVPMGSQPRNAPPGMGAVAWAKENLFATWLSTAVT
                     LALGYVIIRILFAFVSWGLFNAVWSVPYSSTGAAQTAICQNIKGTGACWAIIADKYRL
                     ILFGRYPYEEQWRPALVVAIFIALYVVSAMRRFWRKELALLWVGALTVVGVLMWGGIF
                     GLTPVTDDNWGGLPITLILATFGIAFA"
BASE COUNT          470 a          790 c          853 g          576 t
ORIGIN      
        1 tgccggactc gcagggcatc atgcgcgggc tggacgccga tagttgccgt gccgtggcgg
       61 cagctgctct gggcgacgcc gggaaaacca agttcgtcat taccagcacg cagaaccgct
      121 tcaccgccct gcagtcgggt gaaatcgatt tgctggcacg cagcaccacc tggacgctaa
      181 cccgcgaagg cggtcttggc ctggaattcg cctgggtcaa ctattacgac ggcaccggct
      241 tcctggtgaa aaccgcatcc ggcgtcaaat ccgccaagga gttggacggt gccacgatct
      301 gcgtgcagcc cggcacgtcg acggagctgg cgatttccga ctacttccgc ctgcatgacc
      361 tgaaatacac accgatcgag atcggcgacc tgaccgagat ccagggcgcc ttcatgtccg
      421 gccggtgtga cgcgtattcg accgatagct cggcgttggc ggcgttccgg ttcagccagg
      481 ggccgaaggc cgaggacctg ctcctgttgc ccgagatcat cagcaaagag ccgcttggcg
      541 tcatggttcg caagggcgat gacaaatggt tcgacatcgt ccgctggacc ttcgcggcga
      601 tgatcacggc cgaggagaaa ggtatcacca gccagaatat cgataagttc atggactcca
      661 aagatcctga cattcgccgg cttctggggg tcgagggcga catgggcaaa cagctcggtg
      721 tggatccgaa atgggcttat aatgtgatca aacaggtcgg taatctggag gagctgtggg
      781 accgcaacat cgcgccgatg ggtgcgccgc gcggcctcaa taacatctgg accaaaggcg
      841 gcttgcaata cgcgccgccg ctgcggtgag tgcggcgttc taccaaagca gctgaaggat
      901 ttggcgatca cgtgtcagac gcaacgatcg acccgaggct gaccactggc catgaggcac
      961 cgaagcacgc gctgcggttc tcgtggtccg atccgcgctt ccgggcgatc gtctggcagg
     1021 tcgtcattct tggtggtgtc gcagcgattg cctggtacct gatcgccaac accagccgga
     1081 acctggaatc gcggcatatc gcgacgggtt ttggtttcct cgatcggacg gccggcatcc
     1141 cgatcggcga atcactgatc tcttacaatc cggcagtcga tacgtttggg cgcgcgcttt
     1201 tcatcggcct gctcaacacg ttgaaggtgt cggtgatcgg gatcgtgctg gccacgattc
     1261 tcggcacctt gatcgggatt ggccggctgt ccaggaactg gctggtggcg cggctgacgg
     1321 cgttttacgt cgagaccatc cgtgacctgc cgctgctgct gcaattgttg ttctggtaca
     1381 cgattttgca gagccttccg gcaccgcgca aggcgatatc catcggtggg gcggtgtatt
     1441 tatccaatcg tggcctgaag cttcctgcgc tggactggga attcgcccac accgccgcat
     1501 tgctggcatt gctcgccgga gcggtcggga cctggctgtg gactcgccac gcccgccagc
     1561 ggcaggaggc gagcggcgta cggccccggg tcttgccggt cgccctggcg ttgcttgtcg
     1621 gtttgccttt tgtggtctgg gctgcgctgg gtgcgccatg gcactgggac gtgcccgctt
     1681 tgcacgggtt caactttatg ggcggcgcca atgtcagtcc ggaattcttc gcgctgctgc
     1741 ttggcctggt gacctacact gcaggctata tagcagaaat cgtccgctcc ggcatccagg
     1801 ctgtcccgtt gggccaatgg gaggcggcag gcgcgcttgg tctgaaacgc ggcgccgtgc
     1861 tgcaacgaat cgtcttgccg caggcgttgc gggtgatcat tccgccgatg accagtcagt
     1921 atctcaatct gaccaagaac agttcgctcg cggtggcgat cggctatccg gatttggttt
     1981 cggttgccaa tacgaccttg aaccaaaccg gccaggcgat cgagggcgtc gccgtcatca
     2041 tggctgtcta cctgaccatc agcctgtcga tcagcctgtt catgaactgg tacaattcgc
     2101 acatcgcgct ggtggaacgc taagccatga gcatgacgca aagccttgca ccgtcggtgc
     2161 caatgggctc acagcctcgc aatgctccac ccggcatggg cgccgtcgcc tgggccaagg
     2221 agaacctgtt cgcaacctgg ctctcgaccg cggtgacact ggcgttgggt tacgtcatca
     2281 ttcgaattct gttcgccttc gtcagttggg gtttgttcaa cgcggtgtgg tcggtgccgt
     2341 attcctccac cggcgccgcg caaaccgcca tatgccaaaa catcaaaggc accggtgcct
     2401 gctgggctat tatcgccgac aaataccggc tgatcctgtt tggccgttat ccgtacgagg
     2461 agcagtggcg gccggctctg gtggtggcga ttttcatcgc actttacgtg gtctcggcga
     2521 tgcggcggtt ctggcgcaag gagctggcat tgctgtgggt cggcgcgctg actgttgtcg
     2581 gtgtactgat gtggggcggc attttcggtc tgacgccggt gaccgacgat aactggggcg
     2641 gtttgccgat cacgctgatc ctggcgacgt tcggcatcgc tttcgcatt
//
LOCUS       DATAVD010000125         1672 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_384516, whole genome shotgun sequence.
ACCESSION   DATAVD010000125 DATAVD010000000
VERSION     DATAVD010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1672
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_384516"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..206)
                     /locus_tag="VHX39_02215"
     CDS             complement(<1..206)
                     /locus_tag="VHX39_02215"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX3989967.1"
                     /translation="MVTIGFLGLGVMGFPMAQHLASAGHPLTVYDINRTAADRLRDTR
                     PDIVIAASPAEVAAAAEVVVTMLP"
     gene            393..1289
                     /locus_tag="VHX39_02220"
     CDS             393..1289
                     /locus_tag="VHX39_02220"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3989968.1"
                     /translation="MNTIQNVSAFLRVARLGSFSAAARELKAVTSVVAKRISQLEKEV
                     GTKLINRSTRGLALTAAGERYVPQFVRLVAAYYHVFNDTDKNNDRIEGFVRILSPPTI
                     TSMLLGVTFANFQLQHPRVDMDIIMMERSANPLEEGFDLALGAWPMSYPNVIDVPLCR
                     YELATVCAPSYLRGKDKPRHPTELVDHHCLTTVLFRTTWGFTHARGSMTVEVHSRMQS
                     SDSRMVRDAARMGMGITILPRMLVEEDLRSGALVPLLEDFPVAAYWVKLLVPRMKMNR
                     PVVRALVNFLKESMQSSAQQRR"
     gene            complement(1296..>1672)
                     /locus_tag="VHX39_02225"
     CDS             complement(1296..>1672)
                     /locus_tag="VHX39_02225"
                     /inference="COORDINATES: protein motif:HMM:NF028057.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="surface-adhesin E family protein"
                     /protein_id="HEX3989969.1"
                     /translation="ADLDSIRKEGTYRIAIYLTVYSSPATNANSIKYDRIVQETAFDC
                     AAHTLSLISTVSYYQGKRSGNSSEKGDWRERFRAVPRDLFSQRVFDATCNAPLARDSA
                     AAESSGDDAATVRLPPAAAAAE"
BASE COUNT          324 a          509 c          523 g          316 t
ORIGIN      
        1 tggggtagca tggtcacgac gacttccgcg gccgcggcaa cttccgccgg cgaggcggca
       61 atcacgatat cgggacgggt gtcccgcaac ctgtcggctg cggtacggtt gatgtcgtag
      121 acggtcagcg ggtggcccgc cgacgcgaga tgctgcgcca tggggaagcc catgacaccc
      181 aggcccaaaa aacctatggt taccataccc cctcggtcgt gcgtcttctc gttgcctcga
      241 tcctagcagc gcccaaatag ccccagaaga gcggaaaacg cgtcatcagc tttcgcaaac
      301 agcgcacgat cgcgcgaaca tcgcgcggcg cctccttcag caaggggacc aaccggggta
      361 cagtggggag atgcggggta tgaggggtag cgatgaacac tattcaaaat gtctcggctt
      421 ttctgcgtgt ggcgcgccta ggcagttttt ccgccgccgc ccgggagttg aaggcggtca
      481 cgtcggtggt cgccaagcgg atctcacaac tcgaaaagga agtcggcacg aagctcatca
      541 accgctcgac gcgcgggctg gcgctcacgg ccgcgggcga gcgttacgtg ccgcagttcg
      601 tgcggttggt ggccgcgtac taccacgtct tcaacgatac cgacaagaac aacgatcgta
      661 tcgagggctt cgtcaggatc ctgtcgccac cgaccatcac ctccatgttg ctgggcgtga
      721 ccttcgccaa cttccagttg caacatccgc gggtcgacat ggatatcatc atgatggagc
      781 gctccgccaa cccgctcgag gaaggtttcg atctcgcgct cggcgcgtgg ccgatgtcct
      841 atccgaacgt gatcgacgtg ccgttatgtc gttacgagtt ggccacggtc tgcgcgccat
      901 cctacctgcg cggtaaagac aagccgcggc atccgaccga gctggtcgat catcactgcc
      961 tgaccacggt gttgttccgg accacgtggg gcttcacaca cgcccgcggc tcgatgacgg
     1021 tagaggtgca ctcacgcatg caatcgagcg acagccgcat ggtgcgggat gcagctcgta
     1081 tgggaatggg aatcaccatt ctgccgcgga tgctggtcga agaggatttg cgctcgggcg
     1141 cgctcgtgcc gttgctcgag gattttccgg tagcggccta ctgggtgaaa ctcctcgtgc
     1201 cacgcatgaa aatgaaccgg cccgtggtgc gggccctcgt gaacttcctg aaagagagca
     1261 tgcagtccag cgctcagcaa cggcgctgag cccgctcact cagccgcagc ggcggcgggc
     1321 ggtaatctca cggtggcggc atcatcgccc gaggactcgg cggccgcact atcccttgcc
     1381 aggggagcat tgcaggtcgc atcgaaaaca cgctgcgaga acaggtctcg cgggaccgcc
     1441 ctgaagcgct cgcgccagtc acctttctcg gagctgttgc cggagcgttt gccctggtaa
     1501 taagacacgg tggagatgag ggataacgta tgcgccgcgc agtcgaacgc cgtctcctgc
     1561 acgatgcgat cgtattttat cgagttggca ttcgtcgccg gactcgagta aacggtcagg
     1621 taaatggcga tccggtaggt cccttctttg cggatcgaat ccaaatccgc at
//
LOCUS       DATAVD010000126         2196 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_384614, whole genome shotgun sequence.
ACCESSION   DATAVD010000126 DATAVD010000000
VERSION     DATAVD010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2196
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_384614"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1673)
                     /locus_tag="VHX39_02230"
     CDS             complement(<1..1673)
                     /locus_tag="VHX39_02230"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3989970.1"
                     /translation="MTYDLLIKNARVVDGSGEPSFQADVAVHQGKIVAVGKISATATR
                     TIDAEGRVVAPGFIDHHTHFDPQALWDPYCGSSVQNGHTTIMVGQCGQVIAPARPGDH
                     DWYLKFFADAEAIPLPVLEKGVNFTWESVAEYMDALGKRRGCNVATLVGHSGIRRYVM
                     GEAASARAEATRDELAAMQRLLREGMYAGALGFSTAPVGRGDPAGAANDEERWALAGV
                     LGELGTGVMQVAGGAPGGTKATRETARQLAARTGRPTIYNLISQPIEHPEEWQEHLGW
                     LEQSWKAGARVYGSCVSVVAGPIFDLRLGLDVPQDEDLMNPNGLFQGMPTWDNVMAKP
                     YQERMRAFRDPEIRKALSAEAVEGTVAQQRPATNRRGQARGFFNRRWDLMQVFMTYHQ
                     RNRGLEGKSITQIAQEQGKSVMDAFLDLALDEDLQTFFIGVDRNTDPVAQKQILGSRY
                     TVIGTSDGGARPHSADRHEYSTHLLQHWVREQPIMTLEEAVHRLTGRTAQMHDMDDRG
                     IVAPGKVADLVLFDPDTIASKPREPVNDLPAGGTRVKRDAIGIDYVIVNG"
     gene            complement(1989..>2196)
                     /locus_tag="VHX39_02235"
     CDS             complement(1989..>2196)
                     /locus_tag="VHX39_02235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989971.1"
                     /translation="WFRDHRSVPIACLLGPFEINSDVRADACVEMCPETPAAKPLRLK
                     KVLFQRNKRYRGAEKIPFRADGFE"
BASE COUNT          421 a          695 c          622 g          458 t
ORIGIN      
        1 ccgttgacga ttacgtaatc gatcccaatt gcgtcgcgct tcactcgcgt cccgccggcc
       61 ggcagatcgt tcaccggttc acgcggcttc gatgcgatcg tgtcaggatc gaacagcacg
      121 agatccgcaa ccttaccagg tgccacaatg ccgcgatcgt ccatgtcgtg catctgcgcc
      181 gttctgccgg taagccggtg caccgcttcc tcaagcgtca tgatcggctg ctcgcgcacc
      241 cagtgttgca gcagatgcgt gctatactca tggcggtccg ccgaatgtgg acgagcgccc
      301 ccatcgcttg tgccaatcac ggtataccgc gagccgagaa tttgcttttg cgccacaggg
      361 tcggtgttgc gatcgacacc gataaagaac gtctgcagat cctcatccag cgccagatcc
      421 aggaaggcat ccattacgct cttcccttgt tcctgggcta tttgtgtgat gcttttgcct
      481 tccaagccgc gattccgttg gtgataggtc ataaagacct gcatcaggtc ccagcgccgg
      541 ttgaagaagc cgcgtgcctg accgcggcga ttggtcgccg gtctttgttg cgcaaccgtg
      601 ccttctaccg cctcggcact caacgccttg cggatttccg gatcacggaa cgcccgcatc
      661 cgttcctgat acggtttggc catcacgttg tcccaggtcg gcatcccctg gaacaatccg
      721 ttcgggttca tcaaatcctc atcctgcggc acatccagtc cgagccgcag atcaaagatc
      781 ggtccggcaa cgacggagac gcaggaaccg tagacccggg cgccggcttt ccaggattgc
      841 tccagccaac ccagatgctc ctgccactcc tcgggatgtt cgatcggttg cgagatgagg
      901 ttgtagatgg tcggccgacc agtgcgggca gccaactgac gggcagtctc ccgggttgcc
      961 ttggtgccgc caggcgcgcc gccggccacc tgcatgacac cggttcccag ctcaccgagc
     1021 acaccggcga gcgcccaacg ctcctcatcg ttggcagcac cggcgggatc gccgcgaccc
     1081 accggggcgg tgctaaagcc cagtgcgccg gcatacatgc cctcgcgcag cagacgctgc
     1141 atggcggcga gttcgtcccg cgtggcctcg gcccgcgccg aggcagcctc gcccatcacg
     1201 tagcggcgaa ttccggaatg cccgaccagc gtcgccacgt tgcagccgcg gcgcttgcca
     1261 agcgcgtcca tgtattcggc caccgattcc caggtgaagt tgaccccctt ttccagcacc
     1321 ggcaggggaa tggcctcggc atcggcaaag aacttcaagt accagtcgtg gtcgccgggc
     1381 cgtgccggag cgatcacctg accgcattgg ccaaccatga tcgtcgtgtg cccgttctgc
     1441 accgacgagc cgcaatacgg atcccacaac gcctgcggat caaaatgcgt gtggtgatcg
     1501 ataaatcccg gagcgacaac gcgcccctca gcgtcgatgg tgcgtgtggc agtggcgctg
     1561 attttgccaa ccgccacaat ctttccttga tgcaccgcaa cgtctgcctg gaacgacggc
     1621 tcgcctgagc cgtctacgac acgagcattc ttgatcagca ggtcataggt catggctttc
     1681 ttgctcctgg ttatactcac tccctttggg tgccgagggt cgtatgaggc ctcgccgcgc
     1741 gggcctcagg caccgtttta ttggatttgg ctggaggcta gtccgtgcgg ggagatccgg
     1801 caatggccga aaaattcttg tcacgtatcg taacgacacg gagtgctgta ttcgcggcgt
     1861 accgcgcgtt cgaggttgca gatcaggtca tccgtcgata atggaaattg agtagcgaac
     1921 cgccgaaaat gtccggaaag tctcaatctt tgatgcttcc aggtcattgc cgaaagcgat
     1981 attacctgtc actcgaagcc atcggcgcga aaagggatct tctctgcacc tcggtacctc
     2041 ttgtttctct gaaataaaac ctttttgagc ctgagcggct ttgcggccgg cgtttcgggg
     2101 cacatttcaa cgcaagcatc tgcacgaacg tcagagttta tttcaaaagg accgagaaga
     2161 catgcgatgg gaaccgaacg atgatccctg aaccac
//
LOCUS       DATAVD010000127         8863 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1128001, whole genome shotgun sequence.
ACCESSION   DATAVD010000127 DATAVD010000000
VERSION     DATAVD010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8863
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1128001"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VHX39_02240"
     CDS             <1..244
                     /locus_tag="VHX39_02240"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989972.1"
                     /translation="GPIEASHVLRNRRDVTLAFGLLKKGVERLAAINGARTVYDNDPL
                     QSALLDITAISTHIIVNEQAAMVPYGRWMMEHAGLA"
     gene            368..1858
                     /locus_tag="VHX39_02245"
     CDS             368..1858
                     /locus_tag="VHX39_02245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX3989973.1"
                     /translation="MITACAIGATVLQLLDQTIANVALPYMQGSFSASFDEILWVLTS
                     YITASAIMTAPVGWLAERFGRKPLYVGCIIGFTLASMLCGAAQSLAQIVMFRILQGMF
                     GAALVPLSQATLLDIYPAERRGFAMAIWGVGVMLGPIMGPTVGGWLTENYSWRWVFYI
                     NLPFGLLAAAGLTVFLPASIGKGKLRFDWLGFGVLMVAIGAMQLMLDRGQDQDWFTSR
                     EIVTEAVLAGLGFYLFLIHVVYAREPLIRLAVFSDINFTAGLTLMFMVGVLMVSSLAL
                     MTPWLQVLSNYPVETAGLIMAPRGFGSLVTTMLGGRLSGKIDARLLVGSGLLMLSYSF
                     WLMTRWTPDVSEREIIIAIVIQGAAMGLVFSPLSVLAFVTLPASLRTEGASLFSLLRN
                     VGAAIGVSVFSSLLAHNSQAMHEMIGASVTPFNRALQTVDGLGHWLDPATQHGAAMLD
                     RMVNHQAQIVAYADDYVMLIMTTLPALLLLLLMRIPRKSVRPGAAE"
     gene            complement(1963..2337)
                     /locus_tag="VHX39_02250"
     CDS             complement(1963..2337)
                     /locus_tag="VHX39_02250"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3989974.1"
                     /translation="MLLHNRAGPIQIRRAFCAGPSGCGKSTLLRVIAGIVQPVAGSVS
                     VLGRTPAKARRDRQIGFVFQDTALLPWRDAIGNVRLPLEVGGKHHLPPTLLGRRSHSI
                     WLVSRVGKGLAAGIIGRDAPTW"
     gene            2425..3279
                     /locus_tag="VHX39_02255"
     CDS             2425..3279
                     /locus_tag="VHX39_02255"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3989975.1"
                     /translation="MPFIASNGLTEAGTSKTIQAGGMTVHYHDIGSGDPVLLLHSYGP
                     GTTAWITFHKVVGALSQHFRCILMDMPNFSKTGPIVYQEGVHAVQARTGVALLDALGI
                     DKAHWVGNSQGGQSAMVAAISYPERVRKFVMGGSHIGTGGDRYLMANRPSEGNRATRQ
                     AQDDPGRENIARYLRVHIDDESLVTDELVDYIHHAHTWSPEFIEARRQSVSLPHDYSP
                     ELPAIQAPVLLIHGRYDRMVAFEISIAILNHITDSRVVLLNNTGHWAPFEKPAEWTAH
                     VLAFLRGY"
     gene            complement(3289..3735)
                     /locus_tag="VHX39_02260"
     CDS             complement(3289..3735)
                     /locus_tag="VHX39_02260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989976.1"
                     /translation="MLAALPVLAAMPARAEAPAAFCARIVNDDTLRPIPQSLVAAADA
                     ALGVTTPPDVAMKTTVFRCGNGHVLVCTVGANLVCGRANTSRTPGRGQMDWCREHPND
                     AFIPAVATGHDTIYAWRCESGMPRIDRQTLEVDARGFIVQNWKLLP"
     gene            complement(3755..4813)
                     /locus_tag="VHX39_02265"
     CDS             complement(3755..4813)
                     /locus_tag="VHX39_02265"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3989977.1"
                     /translation="MKIRHICIQLLVAGVLTFTGAKAQNAAPVQSWGLPPLPAGIGPV
                     EKFADVSGTPQGQFLEGGAFDTQGNLWFVAIGSGWLSYLTPDAKLVPVVNCNPPAELG
                     QTCEPQGTRWHDGKLYLTTRHRGILVYDPQSKQLTTLVYTYRNQLFKGPNDLDFDAEG
                     NLFFTDPWGTGPGPNMSDASGAVYQYSHDGILRRVMDSGLFPNGIAVSPDDATLVVGD
                     FRAGRMWYAPFMTGPTMGCPQCVKDPLRLTFAGVKAGTYVPGNGGPDGVHYDVHGNIW
                     AGLAGIGGIVEIDPHGLIVGFVPIPNGDAATTNFAFGGPDNQDLYFEGATSGTFWRFK
                     APYPGLIGPGGVRMPTGR"
     gene            4955..6049
                     /locus_tag="VHX39_02270"
     CDS             4955..6049
                     /locus_tag="VHX39_02270"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX3989978.1"
                     /translation="MADKIRLGLIGASVKGTWSARSHLPAVQASSEVELTAVCTTKAD
                     SAEAARQAYGARLAFHDYRAMIASPEIDAVAVVVRVPSHFVPTKAALEAGKHVYCEWP
                     LGRTTQEATELSAQAKARGLVTAVGLQARVNPTVMYMKELIESGYVGDIMAVHVSVIR
                     DGVLSRPSNRTWQRDVELGANTLTIAAGHTVDAMRFVTGDFDQLSAVVATQAKQWLDT
                     GRGTLLDVTSPDNILLSGRLANGAVVSVHVGAIPFVGSGYRMEIYGRNGTLVASGDDS
                     PQIGKVVLNGAQAGNTLAPMAVPERFSLITPGASSGEAINVGQMYTLFAQAIRTGESR
                     QPTFETAVELHHLVDAIRQASDTGRAVIVR"
     gene            complement(6065..7303)
                     /locus_tag="VHX39_02275"
     CDS             complement(6065..7303)
                     /locus_tag="VHX39_02275"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3989979.1"
                     /translation="MHLMYFTEQPMKDYPADAGLEIGFTSLLMSNKHFDPVVGSRLYN
                     EFLENYVYAEEMGVDGIMLNEHHNAPFCMQAKANVFASLLAGMTKRVKIVLLGNPLPL
                     TDNPVRLAEELAMIDMVSKGRLVSGFVRGGGQEQLATNVNPAYNRERFQEAHDLIVKA
                     WTVPGPFRWEGKHYHQRVVNPWALPLQQPHPRIWIPGVISHETIIWAAQHGYPYIALN
                     TSIEDTKKIWARYDAAAAEVGYTPGPENRGYLIRCHVAETEEAAHASARQFLWMDGEF
                     TGRLKPVWASPSGYFSPSSRESFVNFVSGQGASPSRPRKTFEQQLADLQIIAGTPDQV
                     VASLRTIMRETRPGIMAFWGNDGRMSQTDARTSIRLLGQEVMPALRETAKELDLKSPF
                     EADMPVSRDWANAQQKQAAE"
     gene            complement(7315..8094)
                     /locus_tag="VHX39_02280"
     CDS             complement(7315..8094)
                     /locus_tag="VHX39_02280"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3989980.1"
                     /translation="MANWKSGIVSAGGTDVHVTRGGEGPPVVILHRDIGTLDRLAFYD
                     ELARSHEVIVPNHPGYGASPRPDWVASVRDIAAIHRCLLDQLGLSKASLVGLGFGGWI
                     AAEMATFAPSDAPRLVLVGAMGVKPPVGEILDQALISYIDYVKQGFHDPGAFEKNYGA
                     TVSTAQLVQWDLCREMSFRVAWKPYMYSDSLPWLLRGVQSKSLIVRGDADSIVPASAA
                     ALYAERLPNARSEIIAGAGHLIEMEQPSALARLIASFIASN"
     gene            8225..>8863
                     /locus_tag="VHX39_02285"
     CDS             8225..>8863
                     /locus_tag="VHX39_02285"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3989981.1"
                     /translation="MSDVLAFAPESTETPGPLEERHLRSPTYRNATNTTRLTSTHWHI
                     AWANGLGWGFDGMDGAILALVAPLLMKEFAINLTTYRSGVQIASLVSIIGLYLWPWLA
                     DKFGRRNVLAINIAVFSLSMPLVALSPAWTTFVAAYCIVRFALNGEWAVGSMLVAETW
                     PARLRGRVLSVDRSTWSLGAALAGTIVTFVVTGWGWRTAYVLPAVIAFLAIYV"
BASE COUNT         1628 a         2687 c         2747 g         1801 t
ORIGIN      
        1 gggaccgatc gaggcctccc atgtcttgcg caatcgccgc gacgtgacgc tcgctttcgg
       61 gttgctgaaa aaaggcgtcg agcggctggc cgcgatcaat ggcgcacgca cggtttatga
      121 caacgacccg ctccaatcgg cgctgctcga tatcaccgcg atctcgaccc atatcattgt
      181 gaatgagcag gccgcgatgg tgccgtatgg ccgttggatg atggagcacg ccggtctggc
      241 ctgacgctgt gccacggttt gactgtggcg gtcgcttgtt tgcatccttc cggtctataa
      301 cgcggacgac gacaaggtcg ccactatgcc gggagagact gtccaccagg aggcgcccca
      361 tcgggcaatg atcaccgcgt gcgcaatcgg cgccacggtg ttgcagttgc tcgaccaaac
      421 catcgccaac gtggcgctgc catatatgca gggcagtttc tccgccagct ttgacgagat
      481 cctctgggtc ctgacgtctt acatcaccgc ctcggcgatc atgacggcgc cggttggctg
      541 gctggcggaa cgctttgggc gcaagccgct ctatgtcggc tgcatcatcg gcttcacgct
      601 cgcctcgatg ctttgcggag cggcgcagtc gctcgcgcaa atcgtcatgt ttcgcatttt
      661 gcaaggcatg ttcggcgccg ccctggtgcc attgtcgcag gccaccttgc tcgacattta
      721 cccggccgag cggcgcggct tcgccatggc gatttggggc gtaggcgtca tgctcggccc
      781 gatcatggga ccgaccgtgg gtggctggct gaccgagaac tacagttggc gctgggtgtt
      841 ctacatcaat ctgccgtttg gcctgctcgc cgccgccgga ttgacggtgt ttctgccggc
      901 cagcatcggc aagggcaaat tgcgcttcga ctggcttggt ttcggcgtgt tgatggtggc
      961 gatcggcgcc atgcaattga tgctcgatcg aggccaggac caggactggt tcacgtcccg
     1021 cgagattgtc accgaggctg tgcttgccgg cctcggtttc tacctgtttc tgatccacgt
     1081 cgtttacgcc cgcgagccgc tgatccggct ggcggtattc agtgacatca acttcaccgc
     1141 cggcctcaca ttgatgttca tggtcggtgt gctgatggtg tcgagcctcg cgctgatgac
     1201 gccgtggctc caggtgttga gtaattatcc ggtggagacg gccggcctga tcatggcgcc
     1261 acgcggattt ggcagcctgg tgacgaccat gttgggcggc agactgtcag ggaaaatcga
     1321 cgcccggctg ttggtcggca gcgggttgct gatgctgtcc tattcgttct ggctgatgac
     1381 gcgctggact cccgacgtat cggagcgcga gattatcatt gcgatcgtga tccagggtgc
     1441 cgcgatggga ctggtgttca gcccgctctc ggtgctggcc ttcgtcacct tgccggcatc
     1501 gttgcggacc gagggcgcgt cgctgttcag cctgttgcgc aacgtcggcg cggcgatcgg
     1561 ggtttcggtg ttctcgtcgc tgctggccca taattctcag gcgatgcatg aaatgatcgg
     1621 cgcctcggtc acgccgttca atcgggcgtt gcagacggtc gacggactgg gccactggct
     1681 cgatcccgcg acacagcatg gcgcggcgat gctggatcgg atggttaacc atcaggcaca
     1741 gatcgtcgcc tatgccgatg actacgtcat gctgatcatg acgacattgc cggcgctgct
     1801 gctgctgttg ctgatgcgca ttccgcgtaa atcggttcgc ccaggggcgg cggaataggc
     1861 tttgcggttt tgtcgatgac tggggttgcg cctcgggcat ctgggcgatt cgcagtgtgg
     1921 gactaccgga cgccgcccac gctattcgtg cgcgcgcgca atttaccagg ttggcgcatc
     1981 ccgcccgata attcctgcgg caaggccttt cccaacccgc gagaccaacc aaatcgagtg
     2041 actcctgcgg cccaggagcg ttgggggaag gtgatgcttg ccgccgactt caagtgggag
     2101 gcggacgttg ccgattgcat cgcgccacgg cagcaaggca gtgtcctgaa agacgaagcc
     2161 gatttgccgg tcgcggcggg cctttgcagg tgttcgaccc agtacgctca cgctgcccgc
     2221 cactggctga acgataccgg cgatcactcg caataacgtt gatttgccgc aaccagatgg
     2281 cccggcgcaa aaggcccgcc ggatctggat ggggccggcc cgattgtgca acagcatcgt
     2341 gcgccctacg gtttggaccg caaccggcct caggccggca ctggaacgtc atggtttttg
     2401 accgacgggc aacaggagga acacatgccg ttcatcgctt cgaatggcct taccgaggcg
     2461 ggcaccagta agaccatcca ggccggaggg atgacggtgc attatcacga catcggctcc
     2521 ggcgatcccg tgctgctgct gcactcgtac ggtcccggca cgacggcatg gattacgttt
     2581 cataaggtgg tcggtgcgct gtcgcagcac ttccgctgca tcctgatgga catgccgaac
     2641 ttcagcaaaa ccgggccgat cgtgtatcag gaaggtgtgc acgccgtgca ggcgcgcacc
     2701 ggagtggctt tgctggatgc tctgggcatc gataaggcgc attgggtcgg caactcgcag
     2761 ggcgggcagt cggcgatggt agcggccatt tcctaccccg agcgggtgcg gaaattcgtc
     2821 atgggcggct cgcacatcgg caccggcggc gatcgttatt tgatggccaa tcgcccctcg
     2881 gagggcaacc gggccacgcg acaggcgcag gacgatccag gccgggagaa cattgcacga
     2941 tatctgcgcg tccacatcga tgatgaaagc ctcgtgaccg acgaactggt ggattacatc
     3001 caccatgcgc acacctggtc gccggaattc atcgaggcgc ggcggcaatc ggtcagtctg
     3061 ccgcacgatt actcgccgga gcttccggct atccaggcgc cagtactttt gatccacggc
     3121 cggtatgatc ggatggtggc gtttgagata agcatcgcaa tcctgaacca catcaccgac
     3181 tcacgcgtcg tgctgctcaa caacaccggt cactgggctc cgttcgagaa gccggcggag
     3241 tggaccgcgc acgtgctggc gtttctgcga ggctactgag gatcggcgtc agggcagaag
     3301 cttccagttt tgcacgatga agccgcgtgc atcgacctcc agtgtttgcc ggtcgatccg
     3361 aggcatcccg ctctcgcacc gccacgcgta aatcgtgtcg tggccggtcg ccacggcggg
     3421 aatgaacgcg tcattgggat gctcgcgaca ccaatccatc tggccacggc cgggcgttcg
     3481 actcgtattc gcccggccgc acaccagatt ggcccccacc gtgcaaacca gcacgtgtcc
     3541 gttgccacag cggaatacag ttgttttcat tgccacgtcg ggcggggtcg ttacacccaa
     3601 agcggcatct gctgccgcca cgagactttg cggtatcggc cgcaatgtat cgtcattgac
     3661 gatccgcgca caaaaagcgg ccggtgcctc cgctcgggcc ggcattgccg caagcaccgg
     3721 cagagccgcg agcaccaaca ttcggagacg caattcagcg cccagtcggc atgcgcacgc
     3781 cacctgggcc aatcagacca ggatagggcg ctttgaagcg ccagaacgtg ccgctggtcg
     3841 ccccctcgaa gtacaggtcc tgattgtcgg ggccgccgaa cgcgaaattg gtcgttgcgg
     3901 cgtcgccatt cgggatcggc acgaagccaa cgatcaggcc gtgcgggtca atttcaacaa
     3961 tgccgccgat gccggccagt cccgcccaga tgttgccatg gacatcgtaa tgaacgccat
     4021 cggggccacc attgcccggc acataggtgc cggcctttac tccggcgaac gtcaggcgca
     4081 gcggatcttt cacgcattgc gggcaaccca tggtggggcc ggtcatgaag ggcgcgtacc
     4141 acatgcggcc cgcacgaaag tcaccgacga ccaacgtcgc gtcatcgggt gacacggcga
     4201 tgccgttggg aaacagtccg ctatccatca ctcggcgcag aataccgtcg tgcgaatatt
     4261 ggtaaaccgc accactggca tcggacatat ttggtcccgg cccagtaccc catgggtcag
     4321 tgaaaaacag attgccttcc gcatcgaaat cgaggtcgtt gggtcctttg aacagctgat
     4381 tgcggtaggt gtacaccaac gtggtcagct gcttcgactg cgggtcgtac accaaaatgc
     4441 cgcgatgacg cgtcgtcaga tacagcttgc cgtcgtgcca gcgagttccc tgcggctcac
     4501 aggtttggcc caattcggcg ggtgggttgc aattgacgac cggcaccagt ttggcgtccg
     4561 gcgtcaggta ggacagccat ccgctgccga ttgccacaaa ccataggttg ccttgggtat
     4621 cgaacgctcc gccttcaagg aactgtccct gcggcgtacc gctgacatcc gcgaatttct
     4681 ctactgggcc gatgcctgcc ggcaatggtg gtaggcccca cgactgaacc ggagcagcat
     4741 tttgcgcctt ggcgccggtg aacgtcagaa cgccggcgac cagcaattgg atgcagatgt
     4801 ggcggatttt catgatgttt gttctccctc ctcccagagg aaacgccatc gtgccgatca
     4861 taagcgccgc gagcaactgg cggcatgttc acaacttccg tttttcgcca gttcgcttaa
     4921 gcttcaccgc atatccgtct ggggagtgaa cgatatggca gacaaaatcc gcctcggcct
     4981 gatcggcgcg agcgtcaagg ggacctggtc ggcgcggtct catctgccgg ccgtgcaggc
     5041 cagttcggag gtcgagttga ccgcagtctg taccacaaaa gccgacagtg ctgaggcggc
     5101 acggcaggct tatggtgctc gcctggcgtt ccacgactac cgcgcgatga tcgcttcgcc
     5161 ggagatcgac gccgtcgctg tcgtcgtgcg ggtgccatcg cacttcgtac caaccaaggc
     5221 agcactggag gccggtaaac acgtctattg cgaatggccc ttaggccgta ccacgcaaga
     5281 ggctacggaa ttatcggccc aggccaaggc ccgcgggctg gtcactgcag tgggcttaca
     5341 agcgcgagtc aatccaaccg tgatgtacat gaaggaactc atcgagagcg ggtatgtggg
     5401 cgacatcatg gccgtccatg tcagcgtgat ccgcgatggc gtgttgtccc ggccatcgaa
     5461 ccgcacctgg cagcgcgatg ttgaactcgg cgccaacacg ctgaccattg ccgctggtca
     5521 cacggtcgac gcgatgcggt tcgtcactgg cgactttgac cagttgtccg ctgtggtggc
     5581 cactcaggcg aagcagtggc tggataccgg ccgcgggact ttgctggacg ttacgtcgcc
     5641 cgataatatt ctgctcagcg gccggctggc gaatggcgcc gtggtgtcgg tgcatgtcgg
     5701 ggccattccg ttcgtgggca gcggctatcg catggagatc tacggtcgta acggaactct
     5761 ggtcgcttcg ggcgatgatt cgccgcagat tgggaaggtc gtgctgaacg gagcgcaagc
     5821 gggcaacacg ctcgcaccga tggcggtgcc ggaacgtttc agcctgataa cgccgggggc
     5881 ctcgtcaggc gaagcgatca atgtcggtca gatgtataca cttttcgctc aggcgatccg
     5941 gaccggtgag agcaggcagc cgacgttcga gactgcggtg gagttgcatc atctggttga
     6001 tgccatcagg caggcgtcgg ataccggccg cgcggtgatc gtccggtaat ccgacgtcgc
     6061 gcgcttactc cgcggcctgc ttttgttgtg cgttggccca atcccgggac accggcatat
     6121 cggcctcgaa cggcgattta aggtcgagtt ccttggcggt ctcgcgcaac gccggcatca
     6181 cttcctggcc gagcaaccgg attgacgtac gagcatccgt ctggctcatc cgcccgtcat
     6241 tgccccagaa cgccatgatg cctggcctgg tttcccgcat gatcgtgcgc agcgaggcca
     6301 ccacctggtc cggagtgccg gcaatgatct gcaggtccgc caactgctgt tcaaaggtct
     6361 tgcgcggccg cgatggcgac gcaccttgcc cggaaacgaa attcacgaat gactcgcggg
     6421 acgacggtga aaaatagccc gatgggctgg cccaaaccgg cttcagacgg ccggtgaatt
     6481 cgccatccat ccacaggaac tgcctcgcac tggcgtgcgc agcttcttcg gtttccgcga
     6541 catggcaacg aatcagatag ccgcggtttt ccggacccgg cgtatagcca acttccgccg
     6601 cggccgcatc ataacgcgcc cagatctttt tggtatcctc gatcgaggtg ttgagagcga
     6661 tatacggata accgtgttgg gccgcccaga tgatcgtttc gtgactgatg acgccgggaa
     6721 tccagatccg cggatgcggt tgttgtagag gcaaagccca tggattgacg acgcgctggt
     6781 ggtaatgctt gccctcccat cggaatggcc ccggaacggt ccaggctttg acgatcagat
     6841 cgtgcgcttc ctggaagcgt tcgcggttat acgcggggtt gacgttggtc gcgagctgct
     6901 cctgcccgcc gccacggacg aagccggaga ccagacggcc tttcgagacc atgtcgatca
     6961 tcgccaactc ttccgccagc cgcaccggat tgtcggtcaa cggcaaagga ttgcccaaca
     7021 aaacgatttt gacgcgtttg gtcatgccgg ccagcagcga tgcgaacacg ttcgccttgg
     7081 cttgcatgca gaatggagcg ttgtgatgct catttagcat gatgccatcg acgcccattt
     7141 cctcggcgta gacgtagttc tccaggaact cgttatagag ccggctgcca accacgggat
     7201 cgaagtgctt gttggacatc agcaacgagg tgaagccgat ctccaatccg gcatcggccg
     7261 gatagtcctt catcggctgc tcggtgaaat acatcaggtg catgacaggt ctcctcagtt
     7321 ggaggcgatg aacgaggcga tcaggcgggc cagcgcagaa ggctgttcca tttcgatcag
     7381 atggccggcg ccggcgatga tttcgctgcg ggcgttgggt aaccgctcag catagagtgc
     7441 ggcagcgctt gccggcacga tgctgtcggc atcgccgcgc acaatcaatg acttcgattg
     7501 cacgccgcgc agcagccagg gcaatgaatc gctgtacatg tatggcttcc acgccacgcg
     7561 gaacgacatt tcgcggcaca aatcccattg caccaattgc gcggtcgaca ccgtcgcgcc
     7621 gtaatttttc tcgaaagcgc ccggatcgtg gaagccttgc ttcacataat cgatatagct
     7681 gatcagggcc tggtcgagga tttcgcccac tggcggcttt actcccatcg ctccgaccag
     7741 caccagccgc ggagcatcgg atggtgcgaa agtcgccatt tccgccgcaa tccagccacc
     7801 gaagccaagg ccaaccaggc tggccttgct caacccgagc tggtccaaca agcaacggtg
     7861 aatggcagcg atgtctcgca cgcttgcgac ccagtcgggt cgtggcgatg cgccatagcc
     7921 tgggtggttg ggcacaatca cctcatgcga tcgtgccagt tcgtcgtaga atgccagccg
     7981 atccaacgtg ccgatgtcgc gatgcagaat aacgacgggc ggtccttcgc cgccccgggt
     8041 cacgtgcaca tccgtgccgc cagcagacac gatgccgctc ttccaatttg ccatccgctc
     8101 gctcccggaa cttccaggga tgactgtgcg acggccagcc cgcgcacgca aatccgcgtg
     8161 ggttgcacga tccggtacga cgcgctcaac atggccacat aaaataaaat ttggaggaag
     8221 cacgatgtcc gacgtcctgg ccttcgcacc cgagtcaacc gagacaccag gcccgctcga
     8281 ggaacgccat cttcgctcgc caacttatcg caatgccacc aacaccacac gcctcacctc
     8341 cactcactgg catatcgcct gggccaatgg ccttggctgg ggctttgatg gcatggatgg
     8401 cgcgatcctg gcgttggttg cgccgttgtt gatgaaggag tttgcaatca atctcacgac
     8461 gtatcgcagc ggcgtgcaga tcgcctcgct ggtcagcatc attggccttt atttgtggcc
     8521 gtggctcgcc gacaagttcg gccggcgcaa tgtcctggca atcaatatcg cagtgttctc
     8581 gttgtcgatg ccgctggtcg cattgtcgcc ggcctggact acgttcgtcg cggcgtattg
     8641 tatcgtgcgc ttcgcgttga atggcgaatg ggcggtgggt tcaatgctgg tggcggaaac
     8701 ctggccggcc cgactgcgag gccgcgtgct cagcgtcgat cgctcgacct ggagtcttgg
     8761 cgccgcactc gccggtacga tcgtgacgtt tgtggtcacc gggtggggct ggcgaaccgc
     8821 ctacgtgctg cctgcggtga tcgcgtttct ggcgatttat gtt
//
LOCUS       DATAVD010000128         3418 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1315110, whole genome shotgun sequence.
ACCESSION   DATAVD010000128 DATAVD010000000
VERSION     DATAVD010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3418
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1315110"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            421..972
                     /locus_tag="VHX39_02290"
     CDS             421..972
                     /locus_tag="VHX39_02290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989982.1"
                     /translation="MPASEILVENADAVVIKDAEFFTQVEEEFGPSYFILLRNFPLNG
                     HYLKLNHIAVLKDYVAPYLRRSFGFIEIYGMTDRTGSRTANYIVGAARVAAVQLGLVS
                     FGIPFTRSDNDFTKTVGEDFVEFKHKQNANDPTFDDGRSEGRFRLAVVALSPAFFGFP
                     TRIFQNRTAGELLSFCRPHEEGQ"
     gene            complement(1350..2111)
                     /locus_tag="VHX39_02295"
     CDS             complement(1350..2111)
                     /locus_tag="VHX39_02295"
                     /inference="COORDINATES: protein motif:HMM:NF006597.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3989983.1"
                     /translation="MTDRTVLITGAARRVGATIARVLAGDGWNVIVHYNRSRADAVAL
                     AEDIRRNGGVCDAVHADMASRTDVESLMQRCVALHGSLSCLINNASVFYYDDIASVSW
                     DSLHDHLASNLVAPVILCRDFVRQFEGSGDGCIINILDQKIANLNPDFLSYTVGKIGL
                     SGLTEMLAMALAGRIRVCGIAPGLALISGNQTQASFEKAWRAPPLHHSTTPDEIAACV
                     QYILASPSMTGNTIFLDGGESLAGRARDVAFDPSV"
     gene            complement(2121..2513)
                     /locus_tag="VHX39_02300"
     CDS             complement(2121..2513)
                     /locus_tag="VHX39_02300"
                     /inference="COORDINATES: protein motif:HMM:NF014233.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEX3989984.1"
                     /translation="MERPETASYIRVVLRDIETEAHVGLHPWERHPERPTRLIVNVEM
                     FAPLVRPLSAETPDTMLDYDPIREALKAWPKRPHTPLLETLLDELVALCFRNKRVSAC
                     RVSIMKPDIFNEAAGAGVEVYQTREPDA"
     gene            complement(2585..>3418)
                     /locus_tag="VHX39_02305"
     CDS             complement(2585..>3418)
                     /locus_tag="VHX39_02305"
                     /inference="COORDINATES: protein motif:HMM:NF028290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEX3989985.1"
                     /translation="FLILLVGNAAGALTPIGNPPLLVGLLRGVPFLWPARNLIAIWLL
                     AVGLLLVAFFVIDWFLARTEPPAPPRRRFSLRGWGNVLLVLIMAASVIMSYAPVLFAV
                     AAGAFSLWITPPAIRRANDFSWHPMIEVAVLFVGIFVTLEPVSELLRQGLAGPFAPGL
                     RLTLNPAGEMRPMMAFWLAGVLSAFLDNAPSYLVFFDLAGIRPEAMTLAQAAALRAIS
                     TGAVMFGGLTYIGNASNLVVRAVASRRGVRMPGFVPFMLWASVVMLPVLAMVSGVFFR
                     G"
BASE COUNT          760 a         1069 c          969 g          620 t
ORIGIN      
        1 ggccagcctg gtgcccgcct ccattcttgt gtgagtaagg cctgataatt ctatcccggc
       61 actttcctgc ggcctgcact cagcatgtct ttcgccattc gggaactgtg cccaatgctc
      121 gggacgccta tggcgccgcg cgcctactcg cagcgacgag acagtgcaat ccgaagggct
      181 gccatcgttg tcttttccga tggcgataaa cgcaaccgcc gtcgccacga ccacggtcat
      241 gattgcgtta gccgggggag atgaggccaa atgtcctttt cgtgggacca ggggagaatt
      301 ttcggataga tcgttacaga cagttgcata tgatgtaacg tcagcgtatg aaggaagacc
      361 tgtgggccac gagcagcccg gcgtgatcgt ggtgtcaact gtgcaacgaa ggactggacc
      421 gtgcctgcat ctgaaatcct ggttgaaaat gccgacgccg ttgtcatcaa ggatgcggag
      481 tttttcaccc aggtcgaaga ggagttcggg ccgagttatt tcattctcct gcgaaacttc
      541 ccgctcaatg ggcactacct gaagttgaac cacatagcgg tgctgaagga ttacgtcgcg
      601 ccgtacctca ggagatcatt cggcttcata gaaatatatg ggatgaccga ccgcaccggg
      661 agtcgcaccg cgaactacat cgtgggcgcc gctcgtgtgg cagcggtaca gttgggcctt
      721 gtctcgttcg gcatcccatt caccagatca gacaatgatt ttaccaagac ggtcggtgag
      781 gatttcgttg aattcaagca caagcaaaac gcaaacgatc cgacgttcga cgacggtcgc
      841 tcggagggga gatttcgcct tgcggttgtt gcgttatcgc ccgccttctt cggatttccg
      901 acccggattt tccaaaatcg gacagcgggc gaactccttt cgttttgtcg tcctcacgag
      961 gaggggcaat agccccggac gcaggcagca tccaacccag ccatcgcatt aacgacgcac
     1021 cggaactccc gtgccaaagt cacggaactg gtacattgtc acgaggcatg ttcgcgacct
     1081 gaagtgacac tggcccgccg ggcaaaatca atgttgtgcg tcgttttcgc gtctcaggcg
     1141 cagggttcgg tccaaccgcc catttgcgcc tttttgcggt cctttgcgtg ttttgcgttt
     1201 tcctttgcca gaagcagcag gaaccacaac cattcggtac cgaatcagca aagcaacagg
     1261 aaaacgcaaa acacgcaaag aaccgcaaat gggccactgc ggcggcggca ccctgcgcca
     1321 cggcgatcca atctgcggcg atgcgttact tacaccgacg gatcgaatgc cacatccctg
     1381 gcgcgaccgg caaggctctc gccgccatcg agaaaaatcg tgtttccggt catcgacggc
     1441 gaggccagga tatattgcac acaagcggca atttcatcgg gtgtggtgct gtggtgcagc
     1501 ggcggcgctc gccaggcttt ttcgaatgac gcctgggttt ggttaccgct gatcaaagca
     1561 agcccaggag cgatgccgca aacgcgaatg cggccggcca gcgccatggc aagcatttcg
     1621 gtcagaccgg acaggccgat cttgccgacg gtgtatgaga gaaaatccgg attcagattg
     1681 gcgattttct gatcgaggat attgatgatg caaccatctc cgctcccctc gaactgacgg
     1741 acaaagtccc ggcacaggat aaccggggca accaaattgg atgccaaatg atcatgcagc
     1801 gagtcccatg ataccgatgc gatgtcatcg taataaaata ccgacgcatt gttgatcagg
     1861 cacgaaagcg aaccgtgcaa ggcaacgcac cgctgcatca ggctttcgac gtcggtccgg
     1921 ctcgccatgt cggcgtgtac cgcatcgcag accccgccgt tccgccgaat gtcctcggca
     1981 agagccaccg catcggcccg cgaccgattg tagtgcacga tcacattcca gccatcgcca
     2041 gccagaacgc gagcaattgt tgcccctacc cgccgcgccg ccccggtgat cagcactgtc
     2101 cgatccgtca tgcgccgcac tcacgcatcc ggttcgcgcg tttgataaac ttccacgccg
     2161 gcgccggctg cctcattgaa gatatccggc ttcatgatcg agacccggca ggcactcacc
     2221 cgcttgttgc ggaaacacaa cgcaaccagc tcgtccagca aggtttccag caatggcgtg
     2281 tgtgggcgtt tcggccaggc cttcagcgcc tcgcgaatgg gatcgtaatc gagcatcgta
     2341 tccggtgtct cggctgacaa aggccgcacc aaaggggcga acatctcgac attgacgatc
     2401 agccgcgtgg gacgttccgg gtggcgttcc cagggatgca gcccgacatg cgcctcggtc
     2461 tcgatgtcgc gcagcaccac gcggatataa ctggcggtct caggtcgttc catgctgacg
     2521 gatcccaggc gtctgaaccg tgtggatagg acgccgtacc ccccgaggca aggcaagcgt
     2581 tccctcagcc gcgaaagaac acgcccgata ccatcgcgag caccggcagc atgaccaccg
     2641 aggcccacag catgaacggc acgaagcccg gcatcctgac gccgcgacgg gaggccaccg
     2701 cgcgcaccac caaattcgat gcattgccga tataggtcag cccgccgaac atcaccgctc
     2761 cggtcgaaat cgctcgcaac gctgccgcct gggccagggt catcgcctcg ggccggatcc
     2821 ccgccagatc gaaaaacacc agatatgacg gggcgttgtc gagaaatgcc gacaacacgc
     2881 cggccagcca gaacgccatc atcggccgca tttctccggc cggattcaac gtcaatcgca
     2941 atccgggcgc gaacggaccg gccaatccct ggcgcagcaa ttccgacacc ggttccaatg
     3001 tcacgaagat gccgacgaac aggaccgcga cctcgatcat cgggtgccag gagaagtcgt
     3061 tggcgcgccg gatcgcgggt ggtgtgatcc acagcgaaaa cgcccccgcc gccacggcaa
     3121 acagcactgg cgcatatgac attatcacgc tcgcggccat aatcaggacc agcaacacat
     3181 tgccccagcc gcgcaacgag aaccgtcgcc gcggtggcgc cggcggctcg gtccgtgcca
     3241 gaaaccagtc gatcacgaaa aatgccacca gcagcagacc caccgccagc agccagatcg
     3301 cgatcaggtt gcgcgccggc caaaggaacg gcacgccgcg cagcagtccc accaacagcg
     3361 gcggattacc gatcggcgtc agggcgcccg cggcattgcc gaccagcaaa atcaggaa
//
LOCUS       DATAVD010000129         4822 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_942631, whole genome shotgun sequence.
ACCESSION   DATAVD010000129 DATAVD010000000
VERSION     DATAVD010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4822
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_942631"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..702)
                     /locus_tag="VHX39_02310"
     CDS             complement(<1..702)
                     /locus_tag="VHX39_02310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989986.1"
                     /translation="MSSLEIVVALLRGIHVAALVSLFGTLVFLVLVAPSAMSECAIEA
                     PILRRRLLRLASISAAAALIVGLAWLVLESAVIAGTDTVATTLHALTVVAWRTQFGQW
                     LLVRGVLLVLVLPLLTRWRAGNAAAAVVSGLALAVQPMLGHAGAIGGSTGTTLIVSEV
                     LHLLAAGAWLGGLLPLFVTIGTLPHNSAATACRGFTPIGLSAVLLLAGTAAVQVTEFM
                     GGLPGLFGTGYGHVAL"
     gene            complement(710..1066)
                     /locus_tag="VHX39_02315"
     CDS             complement(710..1066)
                     /locus_tag="VHX39_02315"
                     /inference="COORDINATES: protein motif:HMM:NF016149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein CopC"
                     /protein_id="HEX3989987.1"
                     /translation="MRWSGLVGLALLAQVSPACAHAFLEHASPPVGSEIATSPSVLAI
                     TFTEGVEPLFSTIELRGPNGAAVPAGTPYTAPDNNTVLSIQLPKLPPGIYTVIWHVTS
                     VDTHKTEGNFQFTVSH"
     gene            complement(1066..2034)
                     /locus_tag="VHX39_02320"
     CDS             complement(1066..2034)
                     /locus_tag="VHX39_02320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989988.1"
                     /translation="MSRSSVLALALAAGVALPSARVAAHGFAGPHLFVSTLIIDDPNV
                     ADEASLPTFFWIPQPTGGGPVPDLYNLAFEFDKRITDNFGFALNDGYQWLTQPGAKTA
                     NGWQNLALTLKYKPYVNDEHEFMMSVGVVRNFARTGANGSNGAALDNDDSSSTEPTVY
                     WGKGFGDLPISWLRPFAFTGELGYQIADKKLKVIGSDPDSGAPLFNNGGSNQWTGGLS
                     IQYSIRYLSSQVKDYGLPEFVNRLTPLVEVAWSSPASKPTQSGTQYLIGIGVNYTATD
                     YAVGVEMLVPGNRQTGSHLGLVAQFHLYFDDMFPTSLGKPIARWWS"
     gene            complement(2099..2485)
                     /locus_tag="VHX39_02325"
     CDS             complement(2099..2485)
                     /locus_tag="VHX39_02325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2946 family protein"
                     /protein_id="HEX3989989.1"
                     /translation="MSYRRTFASGLFFALLALVAQLAAGATVLNMTILDMADLAVIAD
                     ATTICHAHETSDQAPATPHNPADCPICPLCVSLSATAVAIMADPVLPTPRIIMVTPTV
                     ILPPATAPPATLVLAARPRGPPALLT"
     gene            complement(2664..3269)
                     /gene="phaR"
                     /locus_tag="VHX39_02330"
     CDS             complement(2664..3269)
                     /gene="phaR"
                     /locus_tag="VHX39_02330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate synthesis repressor PhaR"
                     /protein_id="HEX3989990.1"
                     /translation="MADTAQKDTDAGTTQVPPVVVKKYANRRLYNTESSSYITLENLA
                     DMVRAGRDFVVYDAKTGDDITRSVLTQIIVEEEGKGHNLLPTNFLRQLIGFYGGGLQG
                     VVPGYLDQAMKAFTQHQEQVQAAMKRTVGSMSSLFPFGNMEEISRQNMAMIDRAWSMF
                     APFKGAAETGGGAPPDPAEQENAALRAEVERLRQELAAKKG"
     gene            3415..3822
                     /locus_tag="VHX39_02335"
     CDS             3415..3822
                     /locus_tag="VHX39_02335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3989991.1"
                     /translation="MTTDANPDEPNGPQVLAQFLQDWTRLWREELHSQTSDADALPLA
                     QIPGVGSPPELAAAMDLWRKAMGTWAETLGSPTLGLSASSVGSRDRSAPSRSAAVAAA
                     SDPRDAEIERLARRVDELEARLAKLETPRRRRG"
     gene            3878..>4822
                     /locus_tag="VHX39_02340"
     CDS             3878..>4822
                     /locus_tag="VHX39_02340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3989992.1"
                     /translation="MPDPPVRWREATARLLDYGGDGPVVLFVPSLINRWTVLDLMEGY
                     SMVRWLGGQGVHTMLLDWGDPEPDFTLTDHIAGRLVRAMEAAKGSFGRLVLAGYCMGG
                     TFAAAAAALRPDLVRGLALLAAPWNFHAGDIEHLHKQTATCAMMEPLLRDVATVPVDL
                     LQALFALDDPTAVAEKFRQFGRLDQDSAAARLFVALEDWLNDGVPLSGTTARECMRVW
                     YRDNLPGRGEWRVSGLAIDPAAISMPAFVAVPRRDHIVPPESARALARLLPDVTLVEP
                     NAGHVGMTAGRSAAKVLWEPLRDWLRTIDGDKKKPGRPA"
BASE COUNT          892 a         1485 c         1555 g          890 t
ORIGIN      
        1 cagagcgaca tggccgtatc ccgtcccgaa caaaccaggc aggccgccca tgaactcggt
       61 cacctgcact gcagcggtgc ccgccagtag cagcaccgcc gacaggccga tcggtgtgaa
      121 gccgcggcac gccgttgctg cagagttatg aggcagcgtc ccaattgtca cgaacaatgg
      181 caacagaccg ccaagccagg cgccggcagc cagcagatgc agtacttccg acacgatcag
      241 cgttgtgccg gtactgccgc caatggctcc ggcatggcca agcattggct gaaccgcgag
      301 cgccagccct gagacgaccg cggcagccgc atttcccgcc cgccaccgcg tgagcaatgg
      361 cagcaccaaa accagcagaa cgccacgcac caggagccat tggccgaact gcgttcgcca
      421 cgcgaccacg gtcagtgcgt gtaatgtcgt tgcgacagta tccgtgccgg cgatgaccgc
      481 gctctccagc accagccacg cgaggccgac gatcagcgca gccgctgcgc tgatggacgc
      541 cagacgcaac aggcgccggc gcaaaatcgg cgcttcgatc gcgcactccg acatcgcaga
      601 cggtgccacc agcacgagga acacgagcgt gccgaacagc gacaccagcg cggcgacgtg
      661 gatcccgcgc agcaatgcca cgacaatttc caaactgctc atgctggact caatggctga
      721 cggtgaactg gaaattgccc tcggtcttgt gcgtatcgac ggaggtgaca tgccagatca
      781 ccgtgtagat gcctggcggc agcttcggca gttggatgct cagaactgta ttgttgtcgg
      841 gtgcggtata cggcgtgccg gccggcaccg cggcgccgtt ggggccacgc agctcgatcg
      901 tgctgaacaa tggttcgaca ccttcggtga aggtgatcgc aagcaccgag ggggaggtgg
      961 caatctcgct gccgaccgga ggactggcat gctccagaaa cgcatgcgcg catgccgggg
     1021 acacctgcgc gagcaacgcc agtccgacca gaccggacca ccgcatcaac tccaccatct
     1081 ggcgattggc ttgccgagac tggtcgggaa catgtcatcg aagtaaagat ggaattgcgc
     1141 gaccagccca agatgcgatc cggtttgccg atttccgggc accagcattt caacgcccac
     1201 ggcatagtcg gttgcggtgt agttcacgcc gatgccgatc agatactgcg ttcctgactg
     1261 agtgggcttg ctcgccggag acgaccacgc cacctcaacc aagggtgtca gccgattgac
     1321 aaactcaggc agtccgtaat cctttacctg tgaggacagg taacgaatac tgtattgaat
     1381 cgacaatccg ccggtccact ggttggatcc gccgttgttg aacagcgggg cacctgaatc
     1441 ggggtcgcta ccgatgactt tcagcttctt gtcggcaatc tggtagccca gttcgccggt
     1501 gaaggcgaat ggccgaagcc aactgatcgg aagatcgccg aagcccttgc cccagtagac
     1561 cgtcggttcg gtcgagctgc tgtcgtcatt gtcaagggct gcgccattcg agccattggc
     1621 gccggtgcgc gcaaaattgc ggacgacgcc aaccgacatc atgaactcat gctcgtcgtt
     1681 gacgtacggc ttgtatttca gtgtcaaagc gaggttctgc cagccattcg ccgttttggc
     1741 gccaggctgg gtcagccatt ggtaaccgtc gttcagagca aagccgaaat tgtcggtgat
     1801 gcgcttatcg aattcgaagg cgagattgta gaggtcggga accggccctc cgccggtggg
     1861 ctgagggatc cagaagaacg ttggcaggct ggcctcgtcg gcgacatttg gatcgtcgat
     1921 gatgagcgtg ctgacgaaca gatgcgggcc ggcgaagcca tgtgcggcaa ctcgcgccga
     1981 tggcagagcg acgccggcgg caagcgccaa cgccaggacg gaagatcggg acatgcaacg
     2041 gaatcctgac aggagtgatg cggtgcgcat ggcaccgctc gcgagacgga tgcggaactc
     2101 aggtcaggag ggcaggcgga ccacgcggtc gcgcggcgag caccagagtt gcaggcggtg
     2161 cagttgccgg cggcaggatg acggtgggcg tgaccataat gatgcgcggc gttggcagca
     2221 ccgggtccgc catgatcgcg acggcggtgg ccgacaacga aacgcaaagc ggacagatcg
     2281 ggcaatccgc gggattatgc ggcgttgcgg gcgcctggtc ggacgtttcg tgagcgtggc
     2341 aaatggtcgt ggcatcggca atgaccgcca gatctgccat gtcgaggatt gtcatgttta
     2401 gtacggtggc gccggcggcc aactgcgcca cgagcgccag taacgcgaaa aacagcccag
     2461 aagcaaaggt gcggcggtag ctcatgacac agcgccaaca tagcggaagt tgcttcccgc
     2521 acaaatcata cgctgaccgc cggttgccga cgcgtcctgt tagaaccaag acgcagaagt
     2581 cctgcgttgt tcattcgaag tctcgcttta ttctaggtcc gggacagacc ttcaccccgc
     2641 caccatgagg tttcgcccag ttgctagcct tttttggcgg ccagttcctg gcgcaaccgc
     2701 tcaacctcgg ctcgcagcgc ggcgttttcc tgttccgcgg gatctggagg agcgccgccg
     2761 ccagtttctg ccgcgccctt gaacggcgcg aacatcgacc acgcccggtc gatcattgcc
     2821 atgttttgcc ggctgatctc ttccatgtta ccgaacggga acagtgacga catcgaaccg
     2881 acggtgcgtt tcatggctgc ctgcacctgt tcctgatgct gggtgaacgc cttcatggcc
     2941 tggtccaggt agcccggcac caccccctgc agcccgccgc cgtaaaaccc gatcagctgg
     3001 cgcaggaagt tggtcggcag caggttgtgc cccttgcctt cttcctcaac gatgatctgg
     3061 gtcagcacgc tgcgggtgat gtcatccccg gtcttggcgt cgtagaccac gaagtcgcgg
     3121 ccggcccgca ccatgtcggc gagattttca agcgtgatgt agctggagct ctcggtgttg
     3181 tacaggcgcc gattggcgta tttctttaca accacaggtg gcacctgcgt ggtgccggcg
     3241 tccgtgtcct tctgggcggt gtcggccatt catccctcgt agatttcttg ccgcttaaca
     3301 tggggcacaa accgccgccg cgaaagccct attgcactgc cgcatgcggt ttgaccgttt
     3361 cgcctggatc gtgcagccct tatggtttcg cctcaaagga aggcaggatg agggatgacc
     3421 acggacgcca acccggacga gccgaacggg ccgcaggttc tggcgcagtt tctgcaagac
     3481 tggaccaggc tgtggcgcga ggaattgcat tctcagacca gcgatgcgga cgcgttgccg
     3541 ttagcgcaga taccgggggt tggatcgccg ccggagctcg ctgccgccat ggatctgtgg
     3601 cgcaaggcga tgggcacctg ggccgaaact ctcggctcgc caactctggg cttatcggcg
     3661 tcatcggtcg ggtcgcgtga ccggtccgcc ccgtcgaggt ccgcggccgt tgctgctgca
     3721 tctgaccctc gcgatgctga gatcgagcgt ctcgctcgcc gcgtcgatga acttgaggcc
     3781 cgcctcgcca aattggaaac cccccgccgc cgtcgaggct gaggcggcct tcctggctgg
     3841 tattcgggcc tggcgctcgc acccctggca tcgcgatttg cccgacccgc cggtgcggtg
     3901 gcgcgaggcg actgccaggc tgttggatta tgggggcgac gggcccgttg tgctgttcgt
     3961 cccgagcctg atcaaccgct ggacggtgct cgatcttatg gaaggttatt ccatggtgcg
     4021 ctggctgggc gggcagggcg tccacacgat gctgctggac tggggcgatc ccgagcccga
     4081 tttcaccctc accgaccaca ttgccggccg tctggtccga gccatggaag cggccaaagg
     4141 cagcttcggt cggctcgtat tggcaggtta ctgcatgggc ggcacctttg cggccgctgc
     4201 ggcggcgttg cggcccgacc tggtcagggg tctcgccttg ctcgccgcgc cctggaattt
     4261 ccacgccggc gacatcgaac atttgcataa acagacggca acctgcgcca tgatggagcc
     4321 gctgttgcgc gacgttgcta ccgtaccagt cgacctgttg caggccttgt tcgcgctgga
     4381 cgatccgaca gcggttgccg agaaattccg ccaattcggc cgcctcgatc aggatagcgc
     4441 cgcggcccgc ctgttcgtgg cgctcgagga ctggttgaac gacggcgttc cgctgtccgg
     4501 cacaaccgcg cgcgagtgca tgcgcgtctg gtatcgtgac aacctccctg ggcgtggcga
     4561 gtggcgggtc tccgggctgg cgatcgaccc cgcggcgatt tcgatgccgg cgttcgtggc
     4621 tgtgcctcgg cgcgatcaca ttgtgccacc ggaatcggca cgcgcgctgg ctcggttgtt
     4681 gccggacgtg acgttggtgg aaccgaatgc cggccatgtg ggaatgacgg cgggacgctc
     4741 ggcggccaag gtcttgtggg aaccgctgcg ggactggttg cgaacgatcg atggcgacaa
     4801 gaagaaaccc gggcgtccgg ct
//
LOCUS       DATAVD010000130         1986 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1128202, whole genome shotgun sequence.
ACCESSION   DATAVD010000130 DATAVD010000000
VERSION     DATAVD010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1986
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1128202"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1070)
                     /locus_tag="VHX39_02345"
     CDS             complement(<1..1070)
                     /locus_tag="VHX39_02345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017404459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3989993.1"
                     /translation="MSHTQSGRPSGLNPHNLERPEGGPSGPVRFGSDVAAETLRALDI
                     PFIALNPGSSYRGLHDSIVNHLGNERPQMLVCLHEESAVALAHGWAKVTGRPMAAAVH
                     SNVGLFHATMAVFNAWCDRVPLLLLGATGPVDAPRRRPWIDWIHTAADQGAILRNYIK
                     WDAQPASPAATQEALVRAAWLANSAPKAPVYVNFDAGMQEAALTEPLPPLPFERFRPQ
                     PDGGVSAAGIDQAVALLREARAPLILMGRVSRSTTAWAERLALAESLHALVATDMKAG
                     AAFPTEHALHVGQPTTFPSPDLTAALAEADVILSLDWVDLGGTLRACPGGMPEGKIIQ
                     VSLDHHLHNGWSMDHQALPPVDL"
     gene            1332..>1986
                     /locus_tag="VHX39_02350"
     CDS             1332..>1986
                     /locus_tag="VHX39_02350"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3989994.1"
                     /translation="MNSRIPTEATRRTLLKTGLQAGGGLLAATSLPAMARAEDHPPLG
                     TWPDGSSGTSVFIGIAVPRTGTYALQGEDELKGYLLAIEHINDGNELIRKISPKTTKG
                     VLGKEVKYGVADSEAKPNTAVQEASRFISENKAVLITGSTSSAVAVALNKLAQREKVL
                     YVAGISGSNDTTGKDCVRYGFRQCFYGQTAAAAIGPVLLKAYGKGKKAAYLTPDYTYG
                     "
BASE COUNT          393 a          632 c          634 g          327 t
ORIGIN      
        1 agatcgaccg gcggcagcgc ctgatgatcc atgctccagc cgttgtgcaa atggtggtcc
       61 agcgacacct ggataatctt gccctccggc atgccccccg gacaggcgcg caacgtgcca
      121 cccagatcga cccagtcgag gctcagaatg acgtccgcct ccgccagcgc ggcagtcaga
      181 tctgggcttg ggaacgttgt cggctgaccg acgtgcaagg cgtgctcggt cgggaacgcc
      241 gcaccggctt tcatgtcagt cgcgaccaaa gcgtgcaggc tctcggccaa cgccaggcgt
      301 tcagcccatg ccgtggtgga ccgagagacg cggcccatca ggatcagcgg tgcacgggcc
      361 tcccgcagca gcgcgacggc ctggtcgatc ccggccgcgg acacgccgcc gtcgggctgc
      421 gggcgaaacc gttcgaatgg cagcggaggc agcggctcgg tcagcgcggc ctcctgcatc
      481 ccggcgtcga agttgacgta aaccggcgcc ttgggtgcgc tattggcaag ccaggcagca
      541 cgcaccaacg cctcctgcgt ggcagcgggg gatgccggtt gcgcgtccca tttgatataa
      601 ttgcgtagga tcgctccctg gtccgccgca gtatggatcc agtcgatcca cggccgccgg
      661 cgcggcgcat caaccgggcc ggtggcaccc agaagcagca gcggtaccct gtcgcaccat
      721 gcgttgaaca ccgccattgt cgcgtggaac agcccaacgt tggagtgcac cgccgccgcc
      781 atcggccggc cggtcacctt ggcccaaccg tgcgccagag cgacagcgct ctcttcatgc
      841 aggcagacca gcatttgcgg ccgctcgttg ccgaggtgat tgacgatact gtcgtgcaat
      901 ccgcgatagc tcgacccggg gttcagcgcg atgaacggga tgtcgagtgc gcgcaacgtt
      961 tcggcagcga catcgctgcc gaagcgtact gggccggacg gtccgccctc gggtcgttcg
     1021 agattgtgtg gattcaggcc agagggcctg ccggattgtg tgtgtgacat acggccctcc
     1081 ggaccttaac tgggcggcga gtgtcggcat tcgggcagct tcgtatcata tcgcggcatg
     1141 tagtgaatgc catgcctgat cgtggcacgg gataatggca cccaccgggc gttgcacgaa
     1201 aaccaaatta ctctgataac gtggcaacac cgcgcggatt cccacgagcc gcgcggacaa
     1261 ttcggagcaa gacggcacac tggcgtaacg cgtcaatacc agtcgtcact tcgtaaaaaa
     1321 aaggaggaaa catgaattct cgtatcccaa ccgaggcgac tcggcgtacg ctgctcaaga
     1381 ccggcttgca ggccggaggc ggactgcttg ccgccacgtc gctgccggcg atggcacgcg
     1441 ccgaagacca tcccccactt ggcacctggc ctgacgggtc gtccgggact tcggtgttca
     1501 tcggcatcgc ggtaccgcgc acaggtacct atgcgctgca gggcgaggat gaactcaaag
     1561 gctacctgct ggcgatcgag cacatcaacg acggcaacga actgatcagg aagatctcgc
     1621 cgaagaccac caagggtgta ctgggaaagg aggtcaaata cggcgtcgcc gactccgaag
     1681 ccaagccgaa caccgcggtc caggaagcgt cgcgcttcat cagcgagaac aaggccgtgc
     1741 tgatcaccgg ctcgacctcg agcgcggtgg ccgttgcgct caacaaactg gcgcaacgag
     1801 agaaagtgct gtacgtcgct ggcatttccg ggtcgaacga caccaccgga aaggactgcg
     1861 tccgttacgg gttccggcaa tgcttctacg gtcagaccgc tgccgccgcc atcgggccgg
     1921 tgctgttgaa ggcgtacggc aagggaaaga aggcagccta tctgacgccc gattacactt
     1981 atggcc
//
LOCUS       DATAVD010000131         7773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_942653, whole genome shotgun sequence.
ACCESSION   DATAVD010000131 DATAVD010000000
VERSION     DATAVD010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7773
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_942653"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(226..867)
                     /locus_tag="VHX39_02355"
     CDS             complement(226..867)
                     /locus_tag="VHX39_02355"
                     /inference="COORDINATES: protein motif:HMM:NF018264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1109 domain-containing protein"
                     /protein_id="HEX3989995.1"
                     /translation="MIHESLIDALAAGLKPVRRRRVWVDLVAVALICAAEIVVFFAVG
                     AAQPDMPMMMKQPTFWWRLASLGLIAGISGILAILSFTPTYSARRDLRWVFLLVMVCL
                     AAGLCLEVGPDEIRSVVRRIDWTDGVQCAGKMIALSIPPVLALGVLMCRGAPIDRVGT
                     ALLVGIAAAAWGAFVFVFACPFDDPLYIAVWYSVGCGTVILGTRAILPRLARW"
     gene            complement(1029..3050)
                     /locus_tag="VHX39_02360"
     CDS             complement(1029..3050)
                     /locus_tag="VHX39_02360"
                     /inference="COORDINATES: protein motif:HMM:NF014713.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEX3989996.1"
                     /translation="MGPLAIPIVAQAAESNRFVSHEDTVSIVSDSDGFRGSTLQLGLL
                     FRLSKGWHIYWKNAGDAGSPPQLTMTRPDHSMAGAFEWPAPDWLVANSLGDYVVSGTV
                     LLPFSASLSQPVPAQGVNVQAAARWLVCSAVICVPQQATFALHLPMGQTLSSATAPLF
                     AAARAAEPVPASFTTKVTPAGRLIVSGQGLAQGGVKEAHFFPDQGDAIVNAAPQRLEL
                     RPNGFSLALKLLKWIPGRPLSGVLEITDATGAKRAFTVAVSAAAARSATQGAGLSTWL
                     WPAIGALIGGMLLNLMPCVFPVLAIKAFGVARLGGEARSSVRAQALAYTAGVVVIILV
                     IGVVLESLRAAGTKLGWGFQLQSPAFVTFTMWLVFGIGLNLAGMFEFSSRFSGIGSTL
                     AARGGLLGSFVTGLVAVAVATPCTAPFMGAAIASALAAPPIFGLGIFFLLGVGMALPF
                     LLIGFFPYLGQLLPRPGQWMIVVRQILAFPMFATAVWLLWVVAQQAGPTGVLIAATGA
                     VLLGFALWLLKFHGWVPFSARLATGIGTLALLPLITAGPASSDMSSDISRASTVPYSA
                     AKLTSLRAAGTPVLIDMSAAWCITCLVNERVALDSGVARAGILAHHVVVMTGDWTNRD
                     PAITEYLEAQHRDGVPLYVYYPADQGTPVVLPQILTPSLVQRTLDDDAG"
     gene            complement(3152..3838)
                     /locus_tag="VHX39_02365"
     CDS             complement(3152..3838)
                     /locus_tag="VHX39_02365"
                     /inference="COORDINATES: protein motif:HMM:NF018473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1223 domain-containing protein"
                     /protein_id="HEX3989997.1"
                     /translation="MRILAGIAVFALMTGTAFAAPRPVVVELFTSQGCSDCPPADALL
                     RHVQAADPGVLALDLHVRYWDNALWTDPFSLQGATDLQNRYASLRGSSEVYTPEAVVD
                     GRTQFVGSDSGAMAAAISQAKTTIGKDGAIPVSVSAPDGRVSVHVGPGTGGATVWLFG
                     FDPERTTTVRGGENGGATLTEVNVVRSITALGTWNGDALQKEIPAPAGTKFAVLVQRP
                     DGEILAAARN"
     gene            complement(3841..4455)
                     /locus_tag="VHX39_02370"
     CDS             complement(3841..4455)
                     /locus_tag="VHX39_02370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX3989998.1"
                     /translation="MADEFLRMMSGWNNEVQAALFNPHTLAPTFRASQITRPPRFNAF
                     YDISQAPQVDLTTWRLELAGRIGDKQAWRIDQLRALLQESQITRFICVEGWRVIGQWS
                     GVPLRHFLRAVNADTRARYVSFKCADGYYTSIDMESALHPQTILALDFLGAPLTAPFG
                     APVRLRIPTKLGFKNPKSIVAMEVTNRWTGGYWERQGYNWFSGS"
     gene            complement(4563..5228)
                     /locus_tag="VHX39_02375"
     CDS             complement(4563..5228)
                     /locus_tag="VHX39_02375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEX3989999.1"
                     /translation="MRSTEIASVLPVQLQRRASKGKVIHPWPLRVMHWLNAVAIVTLI
                     GSGWQIYNASPFLPFTFPHWATIGGWLGAAIAWHLAAIWLLMLNGLAYLIWGFASGHF
                     RKKFWPVSPRAVLRDAWAAVRLRLPHEVGVYNAVQRLLYLGVIALGILAVLTGLAVWK
                     PVQLWPLSDLFGGFFISRVVHFVAMAGIVLFLAVHILLVAMVPRVLPPMITGGHLSDV
                     ERH"
     gene            complement(5238..5942)
                     /gene="msrA"
                     /locus_tag="VHX39_02380"
     CDS             complement(5238..5942)
                     /gene="msrA"
                     /locus_tag="VHX39_02380"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEX3990000.1"
                     /translation="MMRKILLLTCVAGALLAFDAARGSAAESVVLAPAPAIDAPLAKT
                     HGTETAILSGGCFWGMQDVFQHVKGVKEAISGYTGGSADTASYEVVSTGMTGHAESLK
                     IVYDPSEITYGALLRVFVSVAANPTELDYQGPDHGPQYRSAIWAENPAQRQIADAYIR
                     QLAAAHTFPAPIVTQVNKAMPFYPAEAYHQNYAALHPDSLYIASIDAPKVTALAELFP
                     ALYQPQPTLVRVASNS"
     gene            complement(5939..6355)
                     /gene="msrB"
                     /locus_tag="VHX39_02385"
     CDS             complement(5939..6355)
                     /gene="msrB"
                     /locus_tag="VHX39_02385"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEX3990001.1"
                     /translation="MPSSSDVPYRVVHSDAEWRKRLSPAAYQVLRRAGTELPFTSPLL
                     NEERAGIFNCAGCALPLYSSATKYDSGTGWPSFWDHLPGAILTSEDDSFGMDRTEVHC
                     SQCGGHLGHVFPDGPRPTGLRYCMNGVALSFNPREA"
     gene            complement(6616..6912)
                     /locus_tag="VHX39_02390"
     CDS             complement(6616..6912)
                     /locus_tag="VHX39_02390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990002.1"
                     /translation="MFSRVPTFAAAALLAASFAVPAFAQSSSSSMSNDSMSHSSMSSD
                     AGMKHDTMGKGGSMSHDSMGHGGSMSHDTMGNGSMSHDTSPSGSMSHDSISKSQ"
     gene            complement(7165..>7773)
                     /locus_tag="VHX39_02395"
     CDS             complement(7165..>7773)
                     /locus_tag="VHX39_02395"
                     /inference="COORDINATES: protein motif:HMM:NF014713.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX3990003.1"
                     /translation="SGAFWLAGGVAISFAIAGLFIATVGFAIGLDGDVFRTASAILLM
                     LLGAVLLSTTIQTRFEVATGGFSRAGDRLMHRLSLASGKGQFLVGLLLGLVWSPCAGP
                     TLGAASLLAAQRKDLGSVAAVMLAFGVGTTLPMLVVALLSREALLRWRRRILTAGHVG
                     KVMMGLSALAIGGLVVTGVDRSIEAALVSSSPTWLTNLTTQF"
BASE COUNT         1706 a         2417 c         2313 g         1337 t
ORIGIN      
        1 aagggatacc agatcgctcc ggcaccttaa gacctgtctc ttgagagacc cccgtaaccc
       61 tcctcttcga gaggatggca acccaagtgt cttaacctcg tcgctattcg gtcgcgccga
      121 caaagcggtt acacacttta ggtttttttc agagctgatc gaagccaccc acaattccgt
      181 tgttcagtag cgtcaccgaa ttttcggttg agcgtgatgc tcatgctacc accgagcaag
      241 acgcggcaat atcgcgcgag tccccaggat cacggtacca cagccgacgc tataccacac
      301 ggcgatatac aacggatcat caaaggggca ggcaaacaca aagacaaatg ccccccatgc
      361 ggcagcggcg atcccgacga gcaacgccgt cccgaccctg tcgattggtg cgccgcgaca
      421 catcagcacg ccgagtgcca gcacgggcgg tatcgacagg gctatcatct tgcctgcgca
      481 ctggacgccg tcggtccagt cgatcctacg gacgacgctc cgtatttcat cggggcctac
      541 ctcaaggcat aggcctgccg caagacaaac catgacgagc aagaataccc accgcaagtc
      601 acggcgtgct gagtaggtcg gggtgaacga caggatcgcc aggataccgc tgatcccggc
      661 aatcaacccc aggctcgcga gccgccacca gaaggtcggt tgtttcatca tcatgggcat
      721 gtccggctgg gcggctccca cggcgaagaa cacgacgatc tccgccgcgc aaatcagtgc
      781 gacggcgacg aggtcgaccc agacacgccg ccggcgaaca ggctttaggc ccgcggcaag
      841 cgcatcaatc agggattcat ggatcatcgg atcgccctcg aacggacgca gatcgcgagc
      901 cgctgtcccg tcggcttttg ccgaggcgca ccgcatctgc aggcgatggg cttttccgag
      961 cttcccaccg ggcgatatcg cgcacctcgc tctctacccc cgtgattgtt tttcacgtaa
     1021 cgggcgtttc aaccggcatc gtcgtccaag gtcctttgca ccaaggaggg tgtcaggatt
     1081 tgcggaagta cgactggtgt cccctggtcg gccggataat agacgtagag cggcacgcca
     1141 tcccgatgtt gcgcctcgag atactcggtt attgcgggat cccggttggt ccaatcgcct
     1201 gtcatgacga cgacgtggtg cgcgagtatc ccggcccttg cgacacctga atccaacgcg
     1261 acccgttcgt tcactaagca ggtaatgcac caggctgctg acatatcgat caagaccggc
     1321 gttccagccg cgcgcaggct cgtgagtttt gccgcggaat agggaacggt acttgctctg
     1381 gaaatatcgc tggacatatc gctgcttgcc ggcccagccg taatgagcgg caggagcgcg
     1441 agggttccga tccccgttgc gagccttgcc gaaaaaggga cccacccgtg gaatttcagc
     1501 aaccagagag cgaaacccag gagcacggct ccggtcgccg ctatgagaac ccctgtgggc
     1561 cctgcctgtt gagcgacgac ccagagaagc cagacggcgg tcgcgaacat gggaaaggcc
     1621 aggatctgcc gaacaacgat catccattgg ccgggtcgcg gcaggagctg gcccaagtaa
     1681 ggaaagaagc caatcaacag gaatggcaac gccatcccga caccgagaag gaagaagatg
     1741 ccgagcccaa aaatgggcgg ggccgccagg gcggacgcga tcgccgctcc catgaaaggc
     1801 gccgtgcagg gcgtcgccac ggcgaccgcg acgagccccg tcacgaagct tcctagcaag
     1861 ccgccacggg ctgccagtgt cgaaccgatg ccggagaagc gcgaactgaa ttcaaacatt
     1921 ccagcgaggt tcaatccgat cccaaagaca agccacatgg taaatgtaac gaaggctggg
     1981 gactgcagtt gaaagcccca gcctaacttc gttccagcgg cccgcaggct ctccagcacg
     2041 actccgatga ccaagattat cacaacaaca cccgccgtat aggccaatgc ctgtgctcgg
     2101 acggaagacc tcgcttctcc accaagcctc gccacaccga atgccttgat cgcaagcacc
     2161 gggaagacgc atggcatgag gttgagaagc attccgccga tcaatgcgcc gatcgccggc
     2221 catagccagg tgctcagccc tgcaccttgt gttgccgagc gtgcagcggc cgccgacacg
     2281 gcaaccgtga atgcccgctt ggcgccggtt gcatcggtta tttcgagaac gccgctcaga
     2341 ggcctccccg gaatccattt gagcagcttc agagccagcg agaatccgtt aggcctaagc
     2401 tccaggcgtt gcggtgcggc attgacgatg gcgtccccct ggtcggggaa aaaatgtgcc
     2461 tccttgacgc cgccttgcgc cagcccctgg ccactgacaa tcaacctccc ggccggcgtg
     2521 actttcgttg tgaaactcgc gggcacgggc tcggccgcgc gagccgccgc aaaaagcgga
     2581 gccgttgcag aagacagcgt ttggcccatc ggcaagtgga gtgcgaacgt cgcctgttgg
     2641 gggacgcaga taacggcact gcagacgagc cagcgagcag cagcctgcac attgacgccc
     2701 tgcgcaggca ctggctgcga gagcgatgcc gaaaatggta acagcacagt tccgctaacc
     2761 acataatcgc cgagtgaatt tgcgaccagc cagtcaggcg cgggccattc gaacgcgccc
     2821 gccatgctgt ggtctggccg cgtcatggta agctgaggtg gtgaacccgc atcaccagca
     2881 ttcttccagt agatgtgcca tcccttcgac agccggaaca acaagccgag ctgcaacgtc
     2941 gaaccacgaa agccgtcgct gtccgacacg atcgagaccg tgtcttcatg gctgacgaag
     3001 cggttgctct cggcggcctg cgccacgatc ggtatggcca gggggcccat cagcagcacg
     3061 gcaaagagta accgtcggat catcggtgcc cgctccctcg ttgcatgaaa ggcccgccga
     3121 ccggggtagg atttccgcgc gccatactca ttcagttccg tgcggcagca aggatctctc
     3181 catcagggcg ctggacaaga acagcaaact tcgttcctgc cggcgctgga atctctttct
     3241 gcagcgcgtc cccattccag gtgccgagcg cggttatgct gcgaacgacg ttcacctcgg
     3301 tcagcgtcgc tccgccattc tcgccgccgc ggaccgtggt tgtgcgctcc gggtcgaagc
     3361 cgaacagcca tacagtggcc cccccggttc caggcccgac atgaaccgag acccggccgt
     3421 cgggggcgct caccgaaacc ggtatcgcac catctttacc gattgttgtt ttcgcttggc
     3481 tgatcgcagc agccatggcg ccgctatcag aaccgacgaa ctgcgtcctg ccgtcgacaa
     3541 cggcctcagg cgtgtagacc tccgagctgc ctctgaggga ggcatatcgg ttctggagat
     3601 ccgtggcgcc ctggagcgaa aagggatcgg tccagagggc attatcccag tacctcacat
     3661 gcaggtccag ggcgaggacg cctgggtccg ccgcctgaac atgccgcagc aaggcgtccg
     3721 ccggcgggca gtcggaacag ccctgcgatg tgaatagctc caccaccacc ggccgcggcg
     3781 cggcaaacgc cgttcccgtc atcaacgcaa aaacagcgat acctgcgaga atgcgcattt
     3841 tcatgatcca ctgaaccagt tgtaaccttg tcgttcccag tagccgccag tccaccgatt
     3901 cgtgacttcc atggcgacga tggatttggg attcttgaag ccgagctttg tgggaatgcg
     3961 cagccgcacc ggcgcgccga atggtgccgt gagcggcgca ccgaggaaat cgagagcgag
     4021 gatggtctgc gggtgcaacg ccgattccat gtcgatgctg gtgtaatatc catcggcgca
     4081 tttgaacgag acataccgcg ctcgggtgtc ggcattcacc gcgcgcagaa aatgccgcaa
     4141 tggcacgccg ctccactggc cgatcacgcg ccatccctcg acgcaaatga aacgggtgat
     4201 ttgactctcc tgcagcaggg cgcggagctg gtcgatgcgc cacgcctgct tatccccgat
     4261 ccgcccggca agttcgaggc gccaggttgt aaggtcaacc tgtggtgcct ggctgatgtc
     4321 gtagaaggcg ttgaaccttg ggggacgggt aatttgtgaa gccctgaaag tcggcgccag
     4381 cgtatgcggg ttgaagagag ccgcctgcac ttcgttgttc cagccggaca tcatccgcag
     4441 gaactcgtcg gccacatcag ggtggtccgg atcatcgaaa ttgcaggcgg acagcagggt
     4501 caacgagcca aatgcaagcg cgcgaccaaa gagccggcgg cgcgcggggt caaatgtcgt
     4561 catcagtgcc gctccacgtc tgaaagatga ccaccggtga tcatcggcgg cagcacgcgg
     4621 ggaaccatcg ccacgagcag gatatgcacg gcgagaaaca ggacgatgcc ggccatagca
     4681 acgaaatgca cgacgcggga tatgaagaag ccaccaaaca gatccgatag cggccaaagc
     4741 tgcacaggct tccagaccgc gagtcccgta aggacagcga ggatgccgag cgcgatcaca
     4801 ccgagataga gcagccgctg caccgcattg tagacgccga cttcatgcgg cagtctgagt
     4861 cgcaccgctg cccaggcgtc gcgcagcacg gcgcgcggcg acaccggcca aaactttttt
     4921 cggaagtgcc cgctggcgaa accccagatc agataagcca gaccattcag catcaggagc
     4981 caaatcgccg cgaggtgcca ggcgatggca gcgcctagcc atcccccgat cgtcgcccaa
     5041 tgcggaaaag tgaatggcag gaacggcgac gcattataaa tctgccagcc actgcctatc
     5101 aacgtcacaa tggcaaccgc attcaaccag tgcatgacgc ggagtggcca gggatggatg
     5161 actttccctt tagacgcacg tcgttgaagt tggactggta ggacggacgc tatctccgtg
     5221 ctgcgcatca cgatgcccta gctgttcgag gcgacgcgga cgagcgtcgg ctgcggctga
     5281 taaagtgccg gaaacaactc agcgagtgcc gtcaccttcg gtgcatcaat cgacgcgata
     5341 tagaggctgt ccggatgcag cgccgcgtag ttctggtgat aggcctcggc cggatagaac
     5401 ggcatcgcct tgttcacctg ggtgacgatg ggtgccggga aagtgtgggc cgcggcgagt
     5461 tgacggatat aggcatcggc gatctgacgc tgcgcgggat tttccgccca aatagcactg
     5521 cgatattgcg gaccatggtc cggcccctgg tagtccagtt ccgtcgggtt ggctgcgacg
     5581 gagacgaaca cgcgcagcaa cgcgccgtag gtgatctcgc tcgggtcata gacgatcttc
     5641 agcgactcgg catggccggt catccccgtg ctgacgacct catagcttgc cgtatcagcc
     5701 gagccgcccg tatagcccga aatggcttcc ttcacgcctt tgacatgctg gaagacatcc
     5761 tgcatccccc agaagcaccc gccggagagg atcgccgttt ctgttccatg cgtcttggcc
     5821 aagggggcgt cgatcgcggg cgcaggcgcc agaacgacag actcggccgc agacccacgc
     5881 gccgcatcaa aggccaaaag ggccccggca acgcacgtca acaataatat tttacgcatc
     5941 atgcttccct cggattaaat gataaggcca caccgttcat gcagtagcgc aggcctgtgg
     6001 gcctcggacc atccggaaag acatgcccga gatggccacc gcactgactg caatgcacct
     6061 cggttcgatc catgccgaag ctatcgtctt ccgaagtcag gatcgctccg ggcagatggt
     6121 cccaaaagct cggccacccc gtgccgctgt cgtatttcgt cgcggatgag tagagcggca
     6181 gagcacatcc ggcgcagttg aagatacccg ctcgctcctc gttcaggagg ggcgatgtaa
     6241 atggtagctc cgtccctgca cgccggagga cctggtaagc cgccgggctc aatcgtttgc
     6301 gccattcggc gtcggagtgg acaacccgat acggcacgtc ggaggaggac ggcatcgccg
     6361 ccgctgtgcg ccgtgtcaag tacaggcttg ccgcagatag cgcgacgaac gtactcgacg
     6421 aagaaagaat tgcgcgacgc ttcatgtctg gcactcctta tgagtgttga gactcccgcc
     6481 cggtgactgc gaattcttgc gccacgactg aagtacagaa ccaatcgcca cgctattagc
     6541 cggcaacgga cggcagccac agtcgcagga gacacgcctc ggttcgcgcg tcacacgggc
     6601 gtcagttttc cgtctttatt gggacttcga gatgctgtcg tggctcatcg aaccggaagg
     6661 cgatgtgtca tggctcatgc ttccgttgcc catcgtgtca tggctcatcg agccaccatg
     6721 ccccatggag tcatggctca tggaaccgcc ttttcccatg gtatcatgct tcatgccggc
     6781 atcggacgac atggacgagt ggctcatgct gtcgttggac atgcttgagg acgaactctg
     6841 ggcgaaagcc ggtactgcaa aggaagcggc gaggagggca gcggcagcga aggttggaac
     6901 acggctgaac atttgagact ccttaaaggt aacagacgcg cgactgcatt tttccgcgtc
     6961 cagatctata tccgttccgc ccccctttga ggttacagcg gcaaaaaata agtttctcga
     7021 cgccaagcgc ggcgatgcgc ggacaggcgc acgctgccgt ggcgcgcccc gggccgatag
     7081 aaagaaatgg gcaggcattt cggtggagga cggctggcat cggcatcgcc ctcggcggga
     7141 gcggcaaatt ctactcggtg tggattaaaa ttgtgtcgta aggtttgtca gccacgtcgg
     7201 ggacgaactc accaaggctg cctcgatgct ccggtcgacg ccagttacaa ccaggccgcc
     7261 aatggcaagc gcacttaaac ccatcatgac cttgccaacg tgaccagcag tgagaattcg
     7321 ccggcgccag cgcagcagag cttcgcggga tagcaacgcc accaccagca tcggtaaagt
     7381 cgtgcccacg ccgaaggcaa gcatgacagc cgcgacactg ccaaggtcct tacgctgggc
     7441 ggcaagcaag gacgcggccc cgagagtggg gccagcgcag ggactccaaa ccaggccgag
     7501 caggagaccg acaagaaact ggcctttccc actggccaag gacaaacgat gcatgaggcg
     7561 gtcaccggct ctggagaagc caccagtggc gacctcaaac cgcgtctgga ttgtcgtact
     7621 gagaagcacc gccccaagca gcatcagaag aatcgccgac gccgtccgga acacgtctcc
     7681 atcgaggccg attgcaaacc ccacagtcgc aataaataaa ccggcgatcg caaaggatat
     7741 cgcgacaccg cctgccagcc aaaatgctcc gga
//
LOCUS       DATAVD010000132         4981 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1501585, whole genome shotgun sequence.
ACCESSION   DATAVD010000132 DATAVD010000000
VERSION     DATAVD010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4981
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1501585"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            147..977
                     /locus_tag="VHX39_02400"
     CDS             147..977
                     /locus_tag="VHX39_02400"
                     /inference="COORDINATES: protein motif:HMM:NF041278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CmcJ/NvfI family oxidoreductase"
                     /protein_id="HEX3990004.1"
                     /translation="MNFDTLPHVTGEITYLAKMDEKPHTYAYDLPPDMPRSNMLPDVR
                     KVPIYDMRPLGDAMSLDREGFALLDAPTEAGDLYDEDEIRRVYYPESEWIIAEATGAN
                     RVVIFDHTIRRRTPGVADRTPGIPRQPVTRVHGDYTELSGPQRVRDLMGAEADELLKH
                     RYAIINLWRPIKGPLLDAPLALCHAGSIADGDLVAQDLIYRDRTGEIYALFYNEAHRW
                     FYAPVMIRDEVLLLKCYDSMRDGRARFMPHTSFEDPTTPAEKPPRESIELRTLVFFPD
                     "
     gene            1066..2373
                     /locus_tag="VHX39_02405"
     CDS             1066..2373
                     /locus_tag="VHX39_02405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter strand-loop-strand
                     O-heptosyltransferase"
                     /protein_id="HEX3990005.1"
                     /translation="MSPEAKSPYPPAASTPVLWGPDGIRFDFNLGCRVLLPKREAGRW
                     RVRLNDLDTGNILFESDNKGAFVNSAKRWYVRFRVEIWSIEDGSAGEPIPVMTHDYDP
                     SHQDVLIQFPIGTLGDILAWFPYAARFAEVRPQCRVTCALSGLIIPLLREAYPQLHLV
                     THDEVVEQHLADTMYATYSLGVFFGDEANDWQPTDFRLVGLHRTAGYILGVDPAEVAP
                     GLVLPDESRPIAEPYAVIAVQSSSGCKYWTNPNGWREVIGFLREHGYRVICIDQKPVH
                     GFGLMWTQIPNGAEDETGDRPLTERARLLRHASMFIGLSSGLAWLAWAAGCPVVLISG
                     FTHPSNEFATPYRVINWHACNSCWNDPRHQFDHKDFLWCPRHKDTPRHFECTRLITAA
                     QVKQVIRTIPGFGMHNIPNVHALNEMTGSVAGHDGEGASVKKR"
     gene            complement(2567..4441)
                     /gene="mnmG"
                     /locus_tag="VHX39_02410"
     CDS             complement(2567..4441)
                     /gene="mnmG"
                     /locus_tag="VHX39_02410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEX3990006.1"
                     /translation="MSENPEIFDVVVVGGGHAGCEAAAAAARMGARTLLLTHKLETLG
                     EMSCNPSIGGIGKGHLVREVDALDGLMGRVADAAGIHFKLLNRSKGPAVRGPRAQADR
                     TLDRRAMRAALDAVPGLSLRAAPVEDLEIGPDGRLAAVICADGSRVRCAAAVLTTGTF
                     LRGVIHIGDWSTPAGRVGEAPAIGLARTLERLNLPMGRLKTGTPPRLDRATIDWRGLA
                     EDPGDPVPEPFSTLTTRIPSPQLACRVTATTPATHAIIRENLHRSAIHVGNISGVGPR
                     YCPSIEDKVKRFAARERHNIFLEPEGLNDPTVYPNGISTSLPEDVQQALVATIPGLEH
                     ARMVRPGYAVEYDYVDPVALSPGLALRALPGLFLAGQINGTTGYEEAAAQGLLAGINA
                     ARLAGGTDEVRLTRSEAYIGVLVDDLTLHGVSEPYRMFTSRAEFRLSLRADNADLRLT
                     EKGIAWGCVGRDRAVAFRAHQDAVADLMAQAKATGGTPAALARLGVNVRDDGRWRDVV
                     ELSGYDGVAWEALTRAFPFLLEAPAKAVAQMRAEAVYGGYLHRQQAEIRGFAREEAVS
                     LDNVAFDKVGGLSAELRDKLASVRPASFGAAARIQGMTPAALAALAAYLRKRDVAAAE
                     "
     gene            complement(4527..>4981)
                     /gene="petA"
                     /locus_tag="VHX39_02415"
     CDS             complement(4527..>4981)
                     /gene="petA"
                     /locus_tag="VHX39_02415"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEX3990007.1"
                     /translation="GQQIIVLWRGSPIAIVNRTPEALKVLQSPGLVQRLSDPDSSVHQ
                     QPPYAQNWHRSVKPEYAVLVAICTHLGCLPGYMPKPDPTSPAPNWPGGYFCPCHGSKY
                     DLAGRVWSGVPAPYNLPVPPYHFTNDHTIRIGENPPGETFNLASVVQM"
BASE COUNT          897 a         1645 c         1549 g          890 t
ORIGIN      
        1 caacccgtcg cgggtgtggc aggcgatcca acgcgcttcg gtgtagcgat cccggcgaaa
       61 cctcgaccac gggccgctgt cgagtcattg accggctccc gttccgcacc tacctgcacc
      121 gatgcagcac gcagaggagc ctgtcgatga acttcgatac cttgccgcac gtcaccggcg
      181 agatcaccta cctcgcgaaa atggatgaga aaccgcacac ttacgcgtat gacctgccgc
      241 ccgatatgcc gcgcagcaac atgctgccgg acgtccgcaa ggtgccgatt tatgacatgc
      301 gcccgctcgg cgatgccatg tcgctggacc gcgagggttt cgcgctgctc gacgcaccga
      361 ccgaggccgg cgatctgtac gacgaagacg aaatccgccg tgtctactac cccgagtcag
      421 agtggattat tgcggaggcc accggtgcca accgggtcgt catcttcgac cacacgatcc
      481 gccgtcgcac gcccggtgtc gccgatcgca cgcccggcat cccgcgccag ccggtgacgc
      541 gggtccatgg cgactatacg gaattgtccg gtccgcagcg ggtgcgcgac ctgatgggcg
      601 ccgaggccga cgaactgctg aaacaccggt atgccatcat caatttatgg cggccgatca
      661 agggaccgtt gctcgacgca ccgctggcgc tgtgtcacgc cggcagcatt gcggacggcg
      721 atctggtcgc ccaggatctg atttaccgcg accgtactgg ggaaatttac gcgctgtttt
      781 acaacgaggc gcatcgttgg ttctacgctc cggtgatgat ccgcgatgaa gtgttgctgc
      841 tgaaatgcta cgactcgatg cgcgacggac gggcgcggtt catgccgcat acgtcattcg
      901 aagaccccac cacgcccgcg gaaaagccgc cacgcgagag tatcgagttg cgcacgttgg
      961 tgttcttccc ggactaagcg tcgctcgtcg tggcgtaacg gggccggcgt gaaccctaca
     1021 cctggcgagg gcggtgtgtt gccgcctgac ctggccgcca aagacctgtc gccggaagcc
     1081 aaatcgccat acccaccggc tgcgtcgacg cctgttctat ggggaccgga tggcatccgt
     1141 tttgacttca accttggctg tcgcgtgctg ctgccaaaac gtgaagcggg ccgctggcga
     1201 gtgcggttga acgacctcga caccggcaac atcctgttcg aaagcgacaa caaaggcgcc
     1261 ttcgtcaact ccgccaagcg atggtacgtc cgcttccgag tggaaatttg gtcgatcgag
     1321 gacggctcgg ccggggaacc gatcccggtc atgacgcatg actacgaccc gagccatcag
     1381 gacgtactga tccagttccc gattggcact ttgggggaca ttctcgcctg gtttccctat
     1441 gccgcacgct ttgcggaagt gcggccgcaa tgccgggtca cctgcgcgct ctccggcctg
     1501 atcattccgc tgctgcgcga agcctacccg caattgcatc tcgttacgca tgatgaagtg
     1561 gtcgaacaac atctcgcgga caccatgtac gccacttatt cgcttggcgt gttttttggt
     1621 gacgaggcga acgattggca gccgaccgat ttccgcctcg tcggcctgca ccgcaccgcg
     1681 ggctacatcc ttggcgtcga cccggccgag gttgccccag gacttgtgct gccggatgag
     1741 agccggccga tcgccgagcc ctatgccgtc atcgccgtgc agagcagcag cggctgtaaa
     1801 tactggacga acccgaacgg ttggcgggag gtaatcggat ttctcagaga gcatggctat
     1861 cgggtgatct gcatcgacca aaagccggtg cacgggttcg gcctgatgtg gacccagatc
     1921 ccgaacggcg ccgaagacga aaccggcgac cggccgctga ccgagcgtgc gcgcctgctg
     1981 cgtcacgcct cgatgttcat tggcctatcc tccggtctcg cctggcttgc ctgggccgcg
     2041 ggttgtccgg tggtgctgat cagcggcttc acccatccaa gtaatgagtt cgcgacaccg
     2101 taccgcgtga tcaactggca cgcctgcaac agttgctgga acgatccgag gcatcagttc
     2161 gaccacaagg atttcctgtg gtgcccgcgc cataaggata cgccgcggca tttcgagtgc
     2221 acacgtttga tcacggcggc gcaggtgaag caggtgatcc gaaccattcc aggttttggt
     2281 atgcataata tacccaatgt gcacgcgctg aatgagatga ccggctcagt ggccggtcat
     2341 gacggtgagg gtgccagtgt gaagaagcgt tgagtcgtga tacactcagt cgtcatcccg
     2401 ccgtcgtcaa accgtcatcc ccaggcttgt ccaaccgtca tccccggact tgttccgggg
     2461 accgatcgcg gcaaggtgct gacgttggtc accgtgacaa gcacggtgat gacgaaaagg
     2521 ggaatcgcaa ctcacggtcc agtgattacg gataccaggg cctacctcat tccgctgcgg
     2581 caacatcccg cttgcgcaaa tacgcggcca acgccgccaa tgccgccggc gtcataccct
     2641 ggatccgcgc cgccgccccg aatgacgcag gccgcaccga cgcgagcttg tcacgcagct
     2701 ccgccgacag cccgccaacc ttgtcgaacg cgacattgtc caacgaaacc gcttcctccc
     2761 gggcgaaacc acggatttcc gcctgctggc gatgcagata gccgccatac accgcctcgg
     2821 cccgcatctg cgccacggct tttgcgggcg cttccagcag gaacgggaac gcgcgggtca
     2881 gagcttccca ggcgacgccg tcatagccgg acagctcgac cacgtcccgc caacgcccat
     2941 catcccgaac gttcaccccc aaccgggcca gcgccgccgg cgttccgccc gttgccttcg
     3001 cctgcgccat caggtcagcc accgcatcct gatgcgcccg aaacgccacc gcgcggtcgc
     3061 gcccgacgca gccccaggca atgcccttct cggtcagccg caaatcggca ttgtcggctc
     3121 gcaatgaaag ccggaactcg gcgcgtgagg taaacattcg atacggctcg ctgaccccat
     3181 gcaacgtcag atcgtccacc agcacgccga tataagcctc ggaacgggtc agtcggacct
     3241 cgtcagttcc gcccgccaac cgtgcggcgt tgatgccggc cagcagcccc tgcgctgctg
     3301 cctcctcata cccggtggtg ccgttgatct ggccggccag gaacaggcca ggcagcgccc
     3361 gcaacgccag tccgggcgac agtgcgaccg ggtcgacgta atcgtactcg accgcatagc
     3421 ccggccggac catccgcgcg tgctcgaggc cggggatcgt tgcgaccagg gcctgctgca
     3481 cgtcctcggg cagtgaagtc gatataccgt tcggatacac ggtcggatcg ttcaggcctt
     3541 cgggttcgag gaagatgttg tggcgctcgc gggcggcaaa ccgcttcacc ttgtcctcga
     3601 tcgaggggca gtagcgcggc ccaaccccgc tgatattgcc gacatggatg gccgagcggt
     3661 gcaggttttc ccggatgatg gcatgtgtcg ccggcgtggt cgcagtgacc cggcaggcca
     3721 attgtggcga gggaatgcgc gtggtcaggg ttgaaaacgg ctccggcacc gggtccccgg
     3781 gatcttcggc cagacctcgc cagtcgatcg tggcccgatc cagtctgggg ggcgtgccgg
     3841 tcttcagcct gcccatcggc agattaagcc gctccagcgt gcgggcgagg ccgattgccg
     3901 gcgcttcgcc aacccggccg gctggtgtgc tccaatcgcc gatgtgaatg accccgcgca
     3961 ggaaggtgcc ggtggtcagc accgcggcgg cgcaacggac acgggagcca tcggcacaga
     4021 tcaccgcggc cagacgcccg tccggcccga tttccaggtc ttccaccgga gccgcgcgca
     4081 ggctcaggcc ggggacggca tccaacgcag cccgcatcgc ccggcggtcg agggtccgat
     4141 ccgcctgtgc ccgcgggcct cgcacagctg gtcccttgct ccggttgagc agtttgaaat
     4201 ggatccctgc agcatccgcc actcggccca tcaggccgtc gagtgcgtcg acctcgcgca
     4261 ccagatggcc tttgccgatg ccgccgatcg aggggttgca cgacatctcc cccagcgttt
     4321 ccagcttgtg ggtcagcagc agggtacgcg cacccatccg ggctgccgcc gcggccgcct
     4381 cacatccggc atggccgccg ccgaccacca cgacgtcgaa gatttccggg ttttcgctca
     4441 tcggtggtgt gatgcgaggg ttgggcaggc cgagtcaatc ggttccgacg cgtcgggaca
     4501 ggctctgcgg ccaggccggg gtggttctac atctgcacga cggaggccag gttgaaggtc
     4561 tcgccgggcg gattttcgcc gatgcgaatg gtatggtcat tggtgaaatg atagggcggc
     4621 accggcagat tgtatggcgc cggcaccccg gaccaaacgc gtcccgccag gtcgtatttc
     4681 gacccgtggc atggacaaaa atagccgcca ggccagttcg gcgccgggct ggtcgggtcg
     4741 ggcttcggca tatagccagg cagacagcca aggtgcgtgc atatggcgac cagcacggcg
     4801 tattccggtt ttaccgagcg atgccagttc tgcgcataag gcggttgctg atgtacggac
     4861 gagtccggat cgctcagccg ctgcaccagt cctgggcttt gcagcacctt caacgcctcg
     4921 ggcgtgcgat tgacgatggc gatgggactg ccccgccaca gcacaatgat ctgctggccc
     4981 g
//
LOCUS       DATAVD010000133         5289 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3176347, whole genome shotgun sequence.
ACCESSION   DATAVD010000133 DATAVD010000000
VERSION     DATAVD010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5289
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3176347"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..638)
                     /locus_tag="VHX39_02420"
     CDS             complement(<1..638)
                     /locus_tag="VHX39_02420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX3990008.1"
                     /translation="MPDYAPLTLHVPEPAVRPGGTPDFSNVRIPHAGSVARPEIDADP
                     ESIRDLAYSIIRVLNRDAQAVGPWAGLLSNEELLAGLRDMMILRAFDARMVTAQRQGK
                     TSFYMQHTGEEAVSCAFRKALLPGDMNFPTYRQAGLLIAGGHSLVEMMSQIYSNELDP
                     LKGRQMPVLYSFKADGFFSVSGNLATQFIQAVGWAMASAITNDTKVAAGWIG"
     gene            832..1914
                     /locus_tag="VHX39_02425"
     CDS             832..1914
                     /locus_tag="VHX39_02425"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3990009.1"
                     /translation="MRVLVLGGGVIGTSIAFRLAARGADVTVLERSAIACAASGKAGG
                     FLARDWCDGTPLMHLARRSFDLHAELAEDFGGDWGYRRLTTYGGTLGRSSRTARGWIS
                     SDVEINGRLGSVGTTAQVQPAAFTNGMMRAAQARGAGLRMGTVTGLLRRGGHVIGVNL
                     NGEAIEADAVVVAMGPWSVLAARWISLPPVFGLKGHSMVFETGELIPPEAVFLEYEDA
                     DGSMLSPEVFPRPDGTTYVCAISSESALPVDPTSVVPDDGAMDRLKALCDRISPILAA
                     SRVVASGACFRPVTQDGLPLIGAVPGIRGLYVATGHSVWGILNAPATAEAIAELILDG
                     VARTTDLAAFDPARLPALDPGNIVLS"
     gene            complement(1955..3292)
                     /locus_tag="VHX39_02430"
     CDS             complement(1955..3292)
                     /locus_tag="VHX39_02430"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990010.1"
                     /translation="MANNAAGDRIAARPHLSGVIVAATIGNILEWYDFLVYGFFAATL
                     AEVFFPTGDPTLSLLITFGAFGLSYVVRPLGAIFIGNFTDRSGRKAGLTLSIALMMIG
                     TTMMVVTPAYATIGIAAPVIITIARLLQGFSVGGEFGSAVAFLVEHAGARKGYSASWQ
                     WSSTGVVAVIVALFGVALTTLLTHQQLVDWGWRIPWAFGLLIGPVGLWIRSRIAETPE
                     FLGATKPPSVPIGDLLQSHPIPVLLAIGASVISNSSYYLLLYIPTYAVRTLHLPAYTG
                     FVATLVGGVILAVFSVLAGHWSDRTARPRIMLAMAGLFIIAAYPVFWLMVAHPSLATA
                     MFAVGFLNLIKAGYSGVLPSLLAEQFPVALRAVGIAFSYSVSVVVFGGFAPFVATWLI
                     AWTGDPLSPSFYLMATAVLSMVALVAIERRTVRMSEEPGGSMPRSGSITSGAE"
     gene            complement(3458..4741)
                     /locus_tag="VHX39_02435"
     CDS             complement(3458..4741)
                     /locus_tag="VHX39_02435"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990011.1"
                     /translation="MSGSLPGFGAVPIPPTIETRKSWTVCLTALGITAISFAAPAITV
                     VGLRSIAEELGGERSVPALAYSLAWLGASFGGIAMGRAAERFGIRATVIFGSAMIAVG
                     LIVAQSGGRVSLLLGYGLFIGLLGNSGINAPLYIYVSHWFDRRRGTALALVGSGASVS
                     AAIWAPIFVVAEAHIGWRHTMLGFAVFQFVLITPTAALIFAPAPVLTGAARDRHGPKP
                     GARVLGLRPGIVLGLLCIAGFLCCVPMAMPQGHLVAFCGDMGIPASQGAAMLSVLLGA
                     AFVSRQFWGFMADRIGGPRTILAGSVCQITAMIGFLLTRNEAGLFMVSAWFGLGFSGI
                     IPAYVLAVRDLFPASEASWRVPTVLLFSGSGMAFGGWLAGAIYDAVGFYAAAFAAGIL
                     FNVAHLMVIGTVVWRQHHVTTWSRYGLPKSPNPSR"
     gene            complement(4840..>5289)
                     /locus_tag="VHX39_02440"
     CDS             complement(4840..>5289)
                     /locus_tag="VHX39_02440"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3990012.1"
                     /translation="LIQTVRMMRLALPHMKGRTGAAVINIASISGWIAQLAMSGQYGA
                     AKAALVFDTERWALEFVPHGVRVNTVSPGSILVAGNGWDRYRLGSQANYDDYVRHGFP
                     MGRLGTAEEVADVIVFLASPRANWINGRNVPVDGLEQPYPPIDRRPF"
BASE COUNT         1108 a         1654 c         1629 g          898 t
ORIGIN      
        1 tcgccgatcc atcctgcggc gaccttcgtg tcgttcgtga tggcggatgc catcgcccac
       61 ccgactgcct gaatgaactg ggtggcgaga ttgccggaaa cggagaagaa gccgtccgcc
      121 ttaaaggagt aaagcaccgg catttgccgc cctttcaacg gatccagttc gtttgagtaa
      181 atctgggaca tcatttcgac gagcgaatga cctccagcga tcagcaatcc ggcctgacga
      241 taggttggaa aattcatgtc gccgggcaaa agtgccttgc gaaacgcaca actgaccgcc
      301 tcttctccgg tatgctgcat gtagaacgat gtcttgcctt gtcgctgtgc ggtaaccatc
      361 cgcgcgtcga aggcacgcaa aatcatcatg tcgcggagac ccgcaagcaa ttcctcattg
      421 ctcagaagcc cggcccatgg ccccacggcc tgggcgtcgc gattgagaac ccgaatgatc
      481 gaataagcca ggtcacggat agattccgga tcggcgtcga tctccggccg cgcaaccgat
      541 cccgcatgcg gaatccgcac attcgaaaaa tctggggtgc cgccaggccg aaccgctggt
      601 tctggtacgt gaagggtcag aggggcatag tcgggcattt cgtcgcgtct ccctgaattg
      661 ggtcctggtg ggctggccac caatacattc gcagaccatc gtctcgggca ccaggctcct
      721 tggcttcttg cgtgtcgcaa aaaagtcccg catcgagaac caccaagaca acacgggttt
      781 ggcgatgaac gttcccggcg ttgatcgaac cccgaaccgg agcaggcagg catgcgtgtt
      841 ttagtcctgg gaggcggcgt tatcggcacg tccatcgcgt ttcgtctcgc ggcgcgaggc
      901 gccgatgtca cggttctcga acggagtgcg attgcctgcg ccgcgtccgg aaaggcgggc
      961 gggttcctgg cgcgggactg gtgcgacggg acccctctga tgcacctcgc ccgacgcagt
     1021 ttcgacctgc atgctgaact cgcggaggat ttcggcggcg attggggtta tcgccgcctg
     1081 accacgtatg gcggcacgct cggccgatct tcccgcaccg cgcggggctg gatttcgtct
     1141 gatgtcgaga tcaatggcag gctcgggtcc gtcggcacga cagcccaggt gcagccggcg
     1201 gcgtttacga atggcatgat gcgggcggca caggcccgag gtgccgggtt acggatgggc
     1261 acggtcacgg gactgctgcg ccgcggtggc catgtcatcg gcgtgaatct caacggagag
     1321 gccatcgaag ccgacgcggt cgtcgtcgcg atggggccgt ggtcggtgct tgcggcgcgt
     1381 tggatctcgc tcccgcccgt gttcggcctg aaaggccaca gtatggtctt cgagaccgga
     1441 gagctgatcc cgccggaagc cgttttcctc gagtatgagg acgccgatgg gtcgatgctt
     1501 tcacctgagg ttttcccacg accggatgga actacgtacg tctgtgcgat atcgagcgag
     1561 tctgctctgc cggtcgatcc cacctcagtc gtcccggacg atggtgcaat ggatcgcctg
     1621 aaggcactct gtgatcgcat atcacccatt ttggcagcct ctcgggttgt cgcgagcggt
     1681 gcctgctttc gaccagtgac ccaggacgga cttccgttga ttggcgccgt cccgggcatt
     1741 cgcgggctct atgtcgcgac gggccacagc gtttggggaa ttctgaacgc tcccgcaacg
     1801 gcggaggcga tcgctgaact gatcctcgac ggagtcgcgc ggacgaccga ccttgcagct
     1861 ttcgatccgg cgcgactccc ggcccttgat cctggtaaca tcgtcttatc gtaagcagtt
     1921 tcgaattcgg aatatttcgg cccgacgctc ggtatcattc cgctcccgag gtgatcgatc
     1981 cagaccttgg catactccca cccggttctt ccgacatccg cacggtccgt ctctcgatcg
     2041 ccaccaaagc gaccatgctc agcaccgccg tcgccatcag ataaaaactg ggcgacagcg
     2101 ggtcgccggt ccacgcgatc agccatgtcg cgacaaatgg ggcgaacccg ccaaaaacca
     2161 ccaccgaaac gctgtagctg aaggcaatcc caaccgcgcg caaggcgacc gggaattgtt
     2221 ccgccagcag agatggcaag actccgctgt accctgcctt gatgaggttg aggaagccga
     2281 cggcaaacat cgcagtggcg agcgacggat gcgccaccat cagccagaac accggatagg
     2341 ccgcaatgat gaacagaccc gccatagcca gcatgatgcg cggccgcgcc gtgcggtctg
     2401 accaatgtcc tgcaaggact gaaaagacgg cgagaatgac accgccaacc agtgtcgcca
     2461 cgaagccggt ataagctggc aaatgcagcg tcctgaccgc gtaggtcgga atgtagagca
     2521 acaggtaata tgaactgttc gagatgaccg aggcaccgat cgccagcagc accgggatcg
     2581 gatgactttg cagcaaatcc ccgatcggca cggagggcgg tttggtggca ccgaggaatt
     2641 ccggcgtctc ggcgatgcgt gagcggatcc agaggccgac aggtccgatc aacaagccaa
     2701 aagcccaggg aatgcgccat ccccaatcga cgagttgttg atgggtcagc aatgtcgtca
     2761 gagcaacgcc gaacaacgca acgataaccg cgacgacgcc ggtgctcgac cattgccagc
     2821 tcgcactgta acctttgcgg gcgccggcat gctcaacgag aaaagcaacc gcgctgccga
     2881 actcgccgcc gaccgaaaat ccctggagca gacgagcgat cgtaataatg acgggtgccg
     2941 cgatgccgat cgtggcatag gcgggcgtga cgaccatcat cgtcgtgccg atcatcatca
     3001 gcgcgatcga caatgtcagc ccggcttttc gcccagaccg gtcggtaaag ttgccaatga
     3061 agatggcgcc tagcggacgc acgacatagg acaggccaaa cgcaccaaac gtgatcaaca
     3121 gcgacagggt cggatcgccg gttgggaaga atacctcggc caacgtcgcg gcgaagaagc
     3181 cgtagacgag aaaatcatac cattcgagaa tgttgccgat cgtcgccgcg acgatcacac
     3241 cgctcagatg cggcctggcc gcgatcctgt ccccagcggc attattggcc atctgtgctg
     3301 cctcccgttt ccttggcagc tattcggtgg caaggcaggg atgcggtcaa gaggcctccc
     3361 aggcgaggcc tgtcattgcg ataacgagat tattgccgct ggtagtatct cccgatagcg
     3421 acgacaggtt ccgatcaggt ggaacacatc tcccaattca gcggctcggg ttcggcgact
     3481 tcggaagacc atatcggctc caggtggtaa cgtggtgctg tcgccagacg actgtcccga
     3541 tgaccatcag atgcgcgaca ttgaacagga tgccggcggc gaaggccgcg gcgtaaaagc
     3601 cgacagcgtc ataaatcgcg ccagcaagcc agcctccaaa cgccatgcct gacccgctga
     3661 acagcaggac cgtcggcacc cgccacgacg cctcgcttgc cggaaacagg tcgcgcaccg
     3721 cgagcacgta agccgggata atgccactga agccaaggcc aaaccaggcg gagaccatga
     3781 acagcccggc ctcgttccgt gtcagcaaga atccaatcat tgctgtgatc tggcagacgg
     3841 atccggcgag gatcgtcctc ggtccgccga tccggtcagc catgaacccc cagaactgtc
     3901 ggctcacgaa ggcggctccc agcagcacgg aaagcatcgc tgcgccttgc gacgccggga
     3961 tccccatatc gccacaaaac gcgaccaggt gaccttgcgg catcgccatc ggcacgcagc
     4021 acagaaaccc cgcgatgcat aacaagccaa gcacgattcc tggccggagc cccagcaccc
     4081 gggctcccgg cttcgggcca tggcgatcgc gcgcggcgcc ggtgagcacc ggcgccggcg
     4141 cgaaaatcag cgctgcggtc ggcgtgatga gcacgaattg gaatacggca aagccaagca
     4201 tcgtatggcg ccagccaata tgcgcctcgg cgaccacgaa aatcggcgcc cagatcgcgg
     4261 cggagaccga cgcgccgctg ccgaccaaag ccagcgcagt gccacggcgc cgatcgaacc
     4321 agtgcgagac gtagatgtag agcggcgcgt tgatcccgga attgcccaac aggccaataa
     4381 acaggccgta gccgagcagc aggctgaccc ggccgccact ttgcgcgaca atcaatccaa
     4441 ctgcgatcat cgctgagccg aatatgaccg tggcacggat gccgaaacgc tcggccgcac
     4501 gacccattgc gatgccgccg aacgacgcgc caagccaggc gagtgagtag gcgagcgccg
     4561 gcaccgaacg ttcgccgcca agctcctcgg caatcgagcg aaggccaacg acggtgatcg
     4621 ccggagccgc gaacgagatt gccgtgatgc cgagcgccgt caggcagacg gtccaggact
     4681 tgcgtgtctc gatcgtcggt gggatcggta cggcgccgaa acctggcaac gaaccgctca
     4741 tgtcggcgga taattcatta tggacgtccc ggtgttggcg tgtggaccat agctacctgc
     4801 gcaaaccgtc ggcaaggcgc ggcgccagct cgcggggtgt cagaacggcc gacggtcgat
     4861 cggcggatag ggttgctcca ggccgtcgac cggaacgttg cggccgttga tccaattcgc
     4921 ccgcggtgag gccaggaaca cgatgacgtc agcaacttcc tccgcggtac ccaggcggcc
     4981 catgggaaag ccatggcgaa cgtaatcgtc gtagtttgcc tgactgccga ggcggtagcg
     5041 gtcccaaccg ttccccgcga ccaggatcga cccgggtgag actgtgttga cccgcacgcc
     5101 gtgcggcacg aactccagtg cccatcgctc agtgtcgaac accagcgccg ccttggccgc
     5161 gccgtactga ccggacattg cgagctgcgc gatccagcct gagatcgagg cgatgttgat
     5221 cacggcggcg ccggtgcggc ctttcatatg cggcagggcg agccgcatca ttcgcaccgt
     5281 ttggatcag
//
LOCUS       DATAVD010000134         3463 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3176351, whole genome shotgun sequence.
ACCESSION   DATAVD010000134 DATAVD010000000
VERSION     DATAVD010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3463
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3176351"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..454
                     /locus_tag="VHX39_02445"
     CDS             <1..454
                     /locus_tag="VHX39_02445"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEX3990013.1"
                     /translation="FMFGWAKPVPVSAWKFPNPRRYMAIVALAGPAMNFFLVWVTALL
                     LRGLADANTGAWLTTILFDFMLVNMVLGLFNLLPIPPLDGGRVVVGLLPEQLARSWAG
                     LEKYGLIIVLVCILVLPNVLGINPIGDALDVVLPKAFHLAFWLAGYHE"
     gene            447..1253
                     /locus_tag="VHX39_02450"
     CDS             447..1253
                     /locus_tag="VHX39_02450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HEX3990014.1"
                     /translation="MSEAHPNPGADSNEAAPDTLLLKLDGFEGPLDLLLDLARAQKVD
                     LAKISILALVDQYLAVIEGARKVRLELAAEWLVMAAWLTWLKSRLLVPAGADDEEDPE
                     QIAEMLTERLKALELIRAAAAWLGRRPILGLDVFSLGAPEDLTVIDNSRLVIDQAGFL
                     ASYLRGRRRGTKRVAYQPRKLSWFTVQDALQRMTSLLGSMPDWASLEQFLPEIRGNHP
                     DDRLGHRAAMSSTLIASLELARGGQLRLRQETAFGPILVGRGGDALEEEA"
     gene            1250..2224
                     /gene="scpB"
                     /locus_tag="VHX39_02455"
     CDS             1250..2224
                     /gene="scpB"
                     /locus_tag="VHX39_02455"
                     /inference="COORDINATES: protein motif:HMM:TIGR00281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEX3990015.1"
                     /translation="MTDIQQDIPVGTDDEAAETVSTHTEASENAPVAAASECPAAVSD
                     VPAPNDCGDGSLTNDVEAEPALNTPSSVEPVIPAADFAATDPASDGGTDAVGATAGSI
                     QGDQAGMAPASPPLREPDEAALRLAEAAVLASATPMTPRALSQILADDLDPAAVIAAL
                     RARYDGRGFELCEIGGGLQFRTAADLAPQLRKVVQVPRRLPRVALETLAIVAYHQPIT
                     RPEIEDLRGTGLSQQTLDVLLENDLIVARGRKETPGRPTLWGTTAKFLEYFGLRDIRE
                     LPRRQDLLLEAVQPETADTDPLRPDTAAETEPVPPDGAQPGSEATQPA"
     gene            2380..2547
                     /gene="rpmG"
                     /locus_tag="VHX39_02460"
     CDS             2380..2547
                     /gene="rpmG"
                     /locus_tag="VHX39_02460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011179398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEX3990016.1"
                     /translation="MAKSNVVQIKLVSSADTGFFYVTKKNARAQTNKLELKKYDPVAR
                     KHVLFKEAKIK"
     gene            complement(2642..>3463)
                     /locus_tag="VHX39_02465"
     CDS             complement(2642..>3463)
                     /locus_tag="VHX39_02465"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX3990017.1"
                     /translation="TGAEVIANAARNSYDLIVISLQLADEDSLKLVSALRAADATHET
                     PLLLIAETGDRERVLRGFELGASDWLAMPVDENELRARARNQIRRKFYQDRFRSDLST
                     ALELALTDPLTSLYNQRYLRRHLSGLMQSGQGRPIAVLMIDVDHFKIVNDQYGHANGD
                     IALRLIADVFRNNIRAFDSLARYGGEEFVVVMPGSNPDDATAAAERLRLAVESVVFEP
                     VPGMRHNLSVSVGVSCTGEEVFTPERLLHTADLALYEAKRQGRNRVELAPLVSVA"
BASE COUNT          628 a         1109 c         1107 g          619 t
ORIGIN      
        1 gttcatgttc ggttgggcga agccggtgcc ggtctcggcc tggaagttcc ccaacccgag
       61 gcggtacatg gccatcgtgg ctctggccgg gccggcaatg aatttctttc tggtctgggt
      121 cacggcgctg ttgctacggg ggcttgcgga cgccaatacc ggcgcctggc tcaccacgat
      181 tctgttcgat ttcatgctgg tcaacatggt gctcggactg ttcaacctgc tgccgatccc
      241 gccgctcgac ggcggccgtg tcgtcgtcgg cctgctgccc gagcaactcg cccgctcctg
      301 ggccgggttg gagaagtacg gcctgatcat cgtgctggtt tgcattctgg tgctgcccaa
      361 tgtgctgggt atcaatccga ttggggacgc gctggacgtg gttttgccaa aagccttcca
      421 tctcgctttc tggctcgccg ggtaccatga gtgaagcgca ccccaacccc ggcgcagaca
      481 gcaacgaggc cgcgccggac accctgctgc tgaaactgga cggcttcgaa ggtccgctgg
      541 atctgctgct ggacctcgca cgcgcccaga aggtcgacct ggcgaaaatc tccatcctgg
      601 cgttggtcga ccaatacctc gcggtgatcg agggggctcg caaggtgcgc ctggaactgg
      661 cagcggaatg gctggtgatg gcggcctggc tcacctggct gaaatctcgc ctgctggtgc
      721 cggccggtgc cgacgacgag gaagatcccg agcaaattgc cgaaatgttg accgagcggc
      781 tgaaagccct ggaactgatc cgggccgccg ccgcctggct tggccgccgc ccaatccttg
      841 gtctcgacgt gttctccctg ggcgctcccg aggaccttac cgtgatcgac aactcgcggc
      901 tggtcatcga tcaggccggg ttcctggcat cgtatctgcg tggcaggcga cgcgggacga
      961 agcgggtcgc ctaccagccc agaaaactgt cgtggttcac ggttcaggat gccctgcaac
     1021 ggatgacctc gctgcttggc tcgatgcccg attgggcgag tctggagcag ttcctgccgg
     1081 aaatccgagg caatcatccg gacgatcggc tgggacatcg ggccgccatg tccagtacct
     1141 tgattgccag cctggaactg gcgcgcggcg gccagctccg gttgcgccag gagacagcgt
     1201 tcggcccaat tctggtcggc cgcggcggcg atgctttgga ggaggaggca tgacggatat
     1261 ccagcaagac atccctgtcg gcaccgacga tgaggcggct gagacagtct caacccacac
     1321 cgaagcgtcg gagaatgccc cggtcgccgc tgcgtcagaa tgccccgctg cggtatctga
     1381 tgtcccggcg ccaaacgatt gcggcgacgg gtctctgacc aatgacgtcg aggcggagcc
     1441 tgcgctgaac actccgtcct cggtcgagcc ggttatacct gcggccgatt tcgctgctac
     1501 cgacccggca agcgacgggg ggaccgatgc ggtcggggcc accgcaggct cgatccaagg
     1561 tgaccaagcg ggaatggctc cggcctcccc accgttgcgc gagcccgatg aagccgcgtt
     1621 gcgtctggcg gaagctgccg tgttggcgag cgcgacgccc atgaccccgc gggctttgtc
     1681 acaaatcctg gcggacgacc ttgaccccgc ggcagtgatt gccgcgttgc gggcccgcta
     1741 tgacggacga ggtttcgagc tttgcgaaat cggcggcggc ctgcagttcc gcaccgcagc
     1801 ggacctcgct ccacagttgc gcaaggtcgt gcaagtgcca cgccggttgc cgcgcgttgc
     1861 gctggagacc ctggcaatcg tcgcctatca ccagcccatc acgcggcccg agatcgagga
     1921 cctgcgtggc accggtctgt cgcaacaaac cctggacgtg ttgctggaaa acgacctgat
     1981 cgtcgcacgc ggccgcaagg aaaccccggg gcggccgacc ttgtggggga ccaccgcgaa
     2041 gttcctcgaa tatttcgggt tgcgggatat ccgcgaattg cccagacggc aggatttgct
     2101 gctggaggcg gtccagccgg aaacggctga tacagatcct ctccggccgg ataccgcggc
     2161 cgagacagag ccagtcccac cggacggtgc ccaacccgga tcggaagcga cgcagcccgc
     2221 gtagcaaccc ccggtgaatc gatccggggc aatcgatccg ggccaatcgc caccgggcca
     2281 atcgcagctt gacctggcag cccaggatgc gcatgttttg ggcccgtatc actatgccgc
     2341 acggttgctg cggcgtcccg tcgaccgagg atccaggcca tggccaaatc aaacgttgtg
     2401 cagatcaagc tcgtgtccag cgcggacaca ggctttttct atgtcaccaa aaagaacgcc
     2461 cgcgcgcaga caaacaagct ggaactgaag aaatacgatc cggtggcgcg caagcacgtc
     2521 ctgttcaaag aagccaagat caagtagccg cgtccggcat ctttaaagga caggcatctc
     2581 tagagaagtc cgccgcccgg gcggttcggc ccgacggcgg cgccgccccg tagcgggcag
     2641 ttcaggccac tgaaaccaga ggcgcgagtt ccacccgatt acggccctgc cgcttcgctt
     2701 catacagcgc gaggtcggcg gtatgcagca gccgctcggg cgtgaagacc tcctcgccag
     2761 tgcaagatac gccgacactg accgaaagat tgtgccgcat ccccgggacc ggctcgaaca
     2821 cgactgactc gaccgcgagg cgcaaccgtt cggccgcagc cgtcgcatcg tccgggttgg
     2881 agccgggcat cacgaccacg aattcctcgc cgccgtagcg ggccagcgag tcgaacgcgc
     2941 gaatgttgtt gcgaaacaca tcggcgatca gccgcagcgc aatgtcgcca ttggcatgac
     3001 catactggtc gttgacgatt ttgaagtgat cgacatcgat catcaggacg gcaatcgggc
     3061 ggccctggcc gctttgcatc aacccgctca gatgccggcg cagatagcgc tggttataaa
     3121 gcgaggtcag cggatcggtc agcgccagct cgagcgcggt gctcagatcg gaacggaacc
     3181 ggtcctgata gaacttccgc cggatttgat tgcgtgccct ggcccgcagc tcgttctcgt
     3241 cgaccggcat cgccagccag tcgctggctc ccagttcgaa tccgcgtaac acgcgttcgc
     3301 gatcgcccgt ttcggcgatc agcagcagtg gtgtctcatg ggtcgcgtcg gccgctcgca
     3361 gggcagacac cagtttgagt gaatcctcgt cggcgagctg cagactgatc acgatcaggt
     3421 cgtaagaatt tctggcggca ttggcgatga cctcggcccc ggt
//
LOCUS       DATAVD010000135         2201 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_12874, whole genome shotgun sequence.
ACCESSION   DATAVD010000135 DATAVD010000000
VERSION     DATAVD010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12874"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..516)
                     /locus_tag="VHX39_02470"
     CDS             complement(<1..516)
                     /locus_tag="VHX39_02470"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEX3990018.1"
                     /translation="MAFELPTLPYSTSALAAKKMCQETLELHHGKHHQAYVTALNGFV
                     ANDASLQGKSLDDIVKSTAGAGGPVFNNAGQHWNHILFWQCMSPSGGKIPPKLQAKID
                     SDLGGTEKFKTDFKAAGVTQFGSGWAWLVLAPDGKLKVTKTPNGSNPLATGEGKVLLG
                     CDVWEHSYYLDF"
     gene            651..1433
                     /locus_tag="VHX39_02475"
     CDS             651..1433
                     /locus_tag="VHX39_02475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene/phytoene synthase family protein"
                     /protein_id="HEX3990019.1"
                     /translation="MNEQIAALVRRHDPDRFLTALFAPPEDRDALMTLYAFDHELARA
                     REVASEPHLALIRLHWWREVVEGARRRHEVATPLGDLLDARRLEPHHLLPIVDAYEIE
                     SDPCIESLADWQAWLLAGAGGIAVAAGRLLRASDPEMFRPVGAAVGAARVIRWNLALA
                     HRQRSLLPADLLAETGLSVHAAIAAPESPQVASALRRLAMEGQSFLTRAPSGRVPRAV
                     LAAALPAILARRDLRRAPAAHPGPRGLADRLAVIWAGVSGRV"
     gene            complement(1506..>2201)
                     /locus_tag="VHX39_02480"
     CDS             complement(1506..>2201)
                     /locus_tag="VHX39_02480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019087901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990020.1"
                     /translation="AGPNRLDDYLANQRPLPDETRHYVAAIGPSLQYAQPQHISPAQQ
                     FAMNQLPLNIPSGPRYGYGTTVQYASASYSQPVFTQAAAQPVYSPPARPAAVAWNAAP
                     KPVYAAAPVQAYTPPPQRTEVARVEDDDDDDDAPVRRSRGSTHQAETRVAFAAMPTQH
                     GSHLHLISSAMAAEVYTTRRGRKAITEPVSFTRAPEHEHAHAATGWKLHASGPVQAAP
                     VCHKSHGKQVCGL"
BASE COUNT          319 a          694 c          753 g          435 t
ORIGIN      
        1 gaagtcaaga taatagctgt gctcccacac gtcgcagcca agcagcacct tgccctcgcc
       61 ggtcgccagc gggttcgagc cgttcggcgt tttggtcacc ttcagcttgc cgtccggggc
      121 cagcacgagc caggcccagc cggaaccgaa ttgtgtcacg ccggccgcct tgaagtcggt
      181 cttgaacttc tcggtgccgc ccagatcgct gtcgattttc gcttgcagct tcggcgggat
      241 tttgccgccg ctcgggctca tgcactgcca gaacaggata tggttccaat gctggcctgc
      301 attgttgaac accggcccac cggcgccggc ggtcgatttg acgatgtcat cgagcgactt
      361 gccctgcagc gaggcgtcgt tcgccacgaa gccgttcagc gcggtgacat aggcctgatg
      421 gtgtttgccg tgatgcagct ccagggtttc ctggcacatc tttttcgcgg cgagcgccga
      481 tgtggaatag ggcagtgttg gcagttcgaa agccattgga tcctccggag ttcgacggtg
      541 attggacgcg gtggtctgta tgggccgcct cgcacggggt caaccttgca cgactcggcg
      601 cctggcgcca cctcctgggc aatgcgattt gcgccattcc cgttcccccg atgaacgaac
      661 agattgctgc gctggtccgg cggcatgacc cggaccggtt tctcaccgcg ctgtttgcgc
      721 cgcccgagga tcgggacgct ttgatgacat tatatgcgtt cgatcacgag ctggcccgcg
      781 cgcgggaggt cgcctcggag ccgcatctgg cgctgatccg gctgcactgg tggcgcgagg
      841 tggtggaggg cgcgcgccgc cggcatgagg ttgccacgcc gcttggggat ctgctcgacg
      901 cacgtcgact ggaaccgcat cacctgctgc cgatcgttga cgcgtatgag atcgaatccg
      961 atccatgcat cgagtcgttg gccgactggc aggcatggct gttggccgga gccggaggga
     1021 tcgccgtcgc ggcaggccgg cttttgaggg catcggatcc ggaaatgttc cgtccggtcg
     1081 gtgcggctgt tggcgcagcg cgggtgatcc ggtggaacct cgcattggcg catcgacagc
     1141 gcagcctgct gccggccgat ctgctcgccg agaccggcct atcggtgcat gccgcgattg
     1201 cggctcccga gtcaccccag gttgcgtcgg cacttcgccg gttggcgatg gaagggcaga
     1261 gtttcctgac ccgggcgccg tccggtcgcg tgccgcgcgc cgtcctcgcg gcagcattgc
     1321 cggcgattct ggctcggcga gatttgcgac gtgcgccggc tgctcacccc ggtccgcgcg
     1381 gcctcgctga tcgactcgcc gttatctggg ctggagtctc tgggcgagtc tgaaccgacc
     1441 gcgtctgcat caacagggcc ggtcctgact gagaccggcc ctgccctgtt cagagatagc
     1501 gacggtcaga gaccgcagac ctgcttgcca tgggacttgt ggcacaccgg cgcagcctgc
     1561 accggaccgc tggcatgcag cttccacccc gttgccgcgt gggcgtgctc atgctccggc
     1621 gcgcgggtaa agctgaccgg ctcggtgatc gctttgcggc cccgccgtgt cgtgtagacc
     1681 tccgccgcca tggcgctgga gatcaggtgc aggtgagagc cgtgctgggt tggcatggca
     1741 gcaaaggcaa cgcgggtctc ggcttgatgt gtcgatccgc ggctccgccg gaccggcgca
     1801 tcgtcatcgt cgtcatcgtc ttcgactcgc gccacctcgg tccgttgcgg aggcggcgta
     1861 taggcctgca caggtgccgc cgcataaacc ggcttcggcg cggcattcca ggcaaccgca
     1921 gccggtcgtg cgggcgggct atagacgggt tgcgcggcgg cctgcgtgaa caccggctgc
     1981 gaataagagg ccgacgcgta ctggaccgtg gttccgtatc catacctcgg accagacggg
     2041 atgttcagcg gcagttggtt catcgcgaac tgctgggccg gcgagatgtg ttgcggttgg
     2101 gcgtattgca aggacggtcc gatcgccgcc acgtagtggc gtgtctcatc cggcaacggg
     2161 cgttgattgg cgaggtagtc gtccaaccgg ttcggcccgg c
//
LOCUS       DATAVD010000136         4430 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_385333, whole genome shotgun sequence.
ACCESSION   DATAVD010000136 DATAVD010000000
VERSION     DATAVD010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4430
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_385333"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            35..712
                     /locus_tag="VHX39_02485"
     CDS             35..712
                     /locus_tag="VHX39_02485"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEX3990021.1"
                     /translation="MIGAWRWAPSRPITAASSSFTARHSIATGRCFGKKRIRPPRQKR
                     LPEVLSDTQVRAVLGGVRNPVHKTCLALMYACGLRISEAAALQVDAIDSANLLLRIIG
                     KGDKERRVPLPQPMLYELRRLWRTHRHPRWLFPNRGGTGTLNQQVLSRTFKAAVRQAG
                     IKRRVTPHAPRHSYATRLLESGVDTRVVQILLGHVNIATTAIYTHLTEPTRVLLRDVL
                     DKVMSGL"
     gene            728..1279
                     /locus_tag="VHX39_02490"
     CDS             728..1279
                     /locus_tag="VHX39_02490"
                     /inference="COORDINATES: protein motif:HMM:NF025677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase zinc-binding domain-containing
                     protein"
                     /protein_id="HEX3990022.1"
                     /translation="MIEVADVFRRFAGDYLSAHGASMLPSHQRAITDIQACRTEALGG
                     HLWRCDQCSAEVFSYHSCKNRSCPKCHTDQTERWLKARKAEMLPTHYFHITATVPEEL
                     RPVLRANQRDGYAALMKAAAEAVIELARDPRYVGGTVGVLAVLHTWTQQLLYHPHVHC
                     LVTGGGISDDGGSAIEFWPRSAG"
     gene            1418..2884
                     /gene="istA"
                     /locus_tag="VHX39_02495"
     CDS             1418..2884
                     /gene="istA"
                     /locus_tag="VHX39_02495"
                     /inference="COORDINATES: protein motif:HMM:NF033546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEX3990023.1"
                     /translation="MAAKFGVHRRVVRRAIASALPPPHHYPGRRKPKLGAVETFIDKV
                     LDEDRSAPRKQRHTARRIHRRILTEFPGVVVAESTVRNHVRERKHQMGLLRRETFVPQ
                     SYSWAQEAQVDWYEAWVDFGDERTKVQVFVMRSMASGAAFHRAYLHATQQAFLEAHEY
                     AFAYFGGVFQLLRYDNLASAVRKILRGYRREETVRFMAFRSHWRFAAEFCTPGEGHEK
                     GGVEGEGGYFRRNHLVPVPSVADLDALNALLLSGCRADEVRVLDGRMQSVGTALAEER
                     DHLLACVAEGFDLADIVFPLVDKQGCVTVKTNFYSVPARAGTRVEARVHPLHIEVWHA
                     GRLIARHERCHSRRQHVLDLEHYLDVLGQKPGAFAGSKPLAQWRAAGRWPVCYDELWD
                     RLRARHGKQNGTRAMVEVIGLGREFGHDRLRTAVASTVSLGACDVAAVRYLLTEAGLH
                     KARPDSIDVGVLARYDRPMPSVADYDTLLISTPCVGTA"
     gene            2884..3645
                     /gene="istB"
                     /locus_tag="VHX39_02500"
     CDS             2884..3645
                     /gene="istB"
                     /locus_tag="VHX39_02500"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEX3990024.1"
                     /translation="MQDLQDQAIRQHCKTLRMPTIGGQFARLAEAATREGQSHVGYLE
                     ALLAAEMEERESRAITRLLHEAKLPRMKTLDAFEFDRSSVSAAQLRTLAEGDYVAKAE
                     PILLVGEAGTGKTHLATGLCVAACRQRRRVRFTTATALINELAEAAHANQLSRALARW
                     ERLDLICIDELGYVPLAETACELMFQVIADRAEKAAVIVTTNLPFSEWSQVIPNPRLC
                     KALIDRLTDQAHIITTGTDSYRFRRTTAQRRSVKS"
     gene            complement(3842..4057)
                     /locus_tag="VHX39_02505"
     CDS             complement(3842..4057)
                     /locus_tag="VHX39_02505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990025.1"
                     /translation="MFCSNRTTAPVTSAAIADAGKIRLGGGYRLPTSTADAGKIRLGG
                     GYRLPASTADAGKIRLGGGYRLPVNGA"
BASE COUNT          813 a         1397 c         1407 g          813 t
ORIGIN      
        1 gaggacgagg tgcgcggcta cctgcttgag ctgcgtgatc ggggcgtggc gctgggcacc
       61 ttcaagacca atcacggcgg catccagttc ctttaccgcc agacactcga tcgcgactgg
      121 ccgctgtttt ggaaaaaaaa ggattcgccc gccccggcaa aagcgtctgc ctgaggtcct
      181 gtctgacacc caggtccgcg cggtcctggg cggtgtccgg aatcccgtcc acaagacctg
      241 cctcgctctc atgtacgcct gcggcttgcg catcagcgag gccgcggccc tgcaagttga
      301 tgcgatcgac agtgccaacc tgctgcttcg tatcatcggc aagggcgaca aggagcggcg
      361 cgtgccgctg ccacagccaa tgctttacga actgcgcagg ctttggcgga cccatcgtca
      421 tccacgctgg ctatttccca atcgcggcgg caccggcacg ctcaatcagc aggtgctgag
      481 ccgcaccttc aaggccgccg tccgtcaggc ggggatcaaa cggcgggtga caccgcacgc
      541 gccgcgccac agctatgcca cgcggctgct cgaaagtggc gttgacaccc gggtcgtgca
      601 aatcctgctc ggtcacgtca acatcgccac caccgccatt tacacccacc tgacggaacc
      661 cactcgcgtc ttgctcagag acgtccttga taaggtgatg agcggcctct gacgcggcgg
      721 tcccggcgtg atcgaggtcg cggacgtctt ccgccgcttc gcgggcgact acctgtcggc
      781 gcatggcgcg tcgatgctgc catcgcatca gcgcgccatc accgatatcc aggcctgccg
      841 caccgaggct ctcggcggac acctctggcg ctgcgaccag tgcagcgccg aggttttctc
      901 ctatcattcc tgcaagaacc ggagttgccc gaagtgtcac actgaccaaa ccgagcgctg
      961 gctcaaggcc cgcaaggccg agatgctgcc gacccattac ttccacatca ccgcgactgt
     1021 gcccgaggaa ctccgccctg tgctgcgcgc caaccagcgg gacggttacg ccgcgctgat
     1081 gaaggccgcc gcagaggcgg tcatcgaact cgcccgcgat ccccgctatg tcggtggcac
     1141 cgtcggcgtg cttgctgttc tgcacacctg gacgcagcag ctcctgtacc accctcacgt
     1201 ccactgcctg gtgaccggcg gcggcatctc cgacgacggt ggctctgcta tcgaattctg
     1261 gcccaggagt gctggctaat tttggcccac cccccgtcct tcaacctacg gttcccggga
     1321 ttggatcggg gggccttttg tggactggaa agccaaagtg gatttgttcg agcagctccg
     1381 tcgggagcat gagtttggta tcggcacgat cgcgggtgtg gcggcgaagt tcggtgttca
     1441 ccggcgcgtt gttcgtcggg cgattgccag tgcgttgcca ccaccccatc actaccctgg
     1501 acgccgcaaa ccgaagctgg gtgcagttga gaccttcatt gacaaggtgc tcgatgagga
     1561 ccgcagcgcc ccgcgcaaac agcgccacac ggcgcgacgc attcatcggc ggatactgac
     1621 ggaattccct ggcgtcgtcg ttgctgagtc gactgttcgc aaccacgtcc gcgagcgcaa
     1681 acatcagatg ggtctcctgc ggcgcgagac atttgtgccg caaagctaca gttgggctca
     1741 ggaggctcag gtcgactggt atgaggcctg ggtcgatttc ggtgacgagc ggaccaaggt
     1801 ccaggtgttc gtcatgcgct cgatggccag cggcgcggca ttccatcggg cctatctgca
     1861 cgccacgcag caagcattcc tggaggcgca cgagtatgcc ttcgcttact ttggcggggt
     1921 gttccaactg ctgcggtacg acaacctggc cagcgcggtg cgtaagatcc tgcgcggcta
     1981 tcggcgcgag gagacggttc ggttcatggc gttccgctcg cattggcgat ttgccgccga
     2041 attctgcacg cctggcgagg ggcatgagaa gggcggcgtt gaaggcgaag gcggctactt
     2101 ccggcgcaac catctggttc cggtaccaag tgttgccgac cttgatgcgc tgaacgcgct
     2161 gttgctcagc ggttgccgtg ctgacgaggt gcgggtgctg gatggccgca tgcagtccgt
     2221 tggtaccgcg ctggccgagg agcgcgacca tctgctggca tgcgtggcgg aaggcttcga
     2281 cctggccgac atcgtgtttc cactggtgga caagcaaggc tgcgtgacgg tgaagaccaa
     2341 cttctattcc gtgccagcac gagcgggcac acgggtggaa gcacgggtgc atccgctgca
     2401 catcgaggtt tggcacgctg gccgcctgat tgcccgtcac gaacgctgtc acagccgccg
     2461 ccagcatgtg ctggatctcg agcattacct cgatgtgctg gggcagaagc cgggggcatt
     2521 cgccgggtcc aagccgttgg cccagtggcg cgcggccggt cgctggcctg tctgctacga
     2581 cgaactctgg gaccggctac gggcacggca tggcaagcag aatggcaccc gtgccatggt
     2641 ggaggtaatc ggacttggcc gggagtttgg ccatgaccgg ctgcggaccg ctgtcgcctc
     2701 cacggtatcg ctcggcgcct gtgatgtggc cgccgtgcgg tatctgctga cagaggcggg
     2761 cctgcacaaa gcccggccag actccatcga tgtcggtgtt ctggcccgct acgatcggcc
     2821 gatgccgagt gtcgccgatt acgacacgct gctgatctcc acgccctgcg tcggaaccgc
     2881 gtgatgcagg atcttcagga ccaggccatt cgccagcatt gcaagacgct acgcatgcca
     2941 acgatcggcg ggcagttcgc tcggctggcc gaggccgcaa cccgggaggg ccaatcccac
     3001 gtcggctatc tcgaggcgct gctggcggcc gagatggagg agcgcgagag ccgggcgatt
     3061 acccgcttgc tgcatgaggc aaagctgccg cggatgaaga ccttggatgc gttcgagttc
     3121 gaccgctcca gcgtctcggc cgcccaactg cgcacgctgg ccgaaggcga ttatgtggcc
     3181 aaggctgaac cgatcctctt ggtaggcgag gcaggcaccg gaaaaacgca tctggcgacg
     3241 gggctttgcg tcgccgcgtg tcgccagcgg cgacgggtgc ggttcacgac ggctacagcg
     3301 ctgataaacg aactggccga ggctgcgcac gccaaccaac tcagccgcgc gctcgcccga
     3361 tgggaacggc tcgacctgat ctgtatcgac gaacttggtt atgtgccgct ggccgaaacc
     3421 gcctgcgaat tgatgttcca ggtgatcgct gaccgggcgg agaaagcggc ggtgatcgtc
     3481 accaccaatc tcccgttctc agagtggtcc caggtcatcc ccaatccgcg tctgtgcaag
     3541 gcgctgatcg atcgtctgac cgaccaggcg cacatcatca cgaccggcac ggactcctat
     3601 cggttccgcc ggactacggc gcagcgaagg tcggtgaaat catgacaggg aaggcagaaa
     3661 aaacagggaa ggcagaaaaa cgccgctgat ctgctgagcc gggcctcggc ccggctcagc
     3721 agatcaaaca ccggagggtg ggccaatatt cattgtcaca gctaccgaat tccttcagtt
     3781 gcggattcgc gagatcagtc ctggcaagac gaaaccacca tgccagttga tgggtgtccg
     3841 atcaggcacc gttcaccggc aggcggtagc cgccacccag gcgaatcttg ccagcgtcag
     3901 cggtagacgc cggcaggcga tagccgccgc ccaagcggat cttgccagcg tcagcggtag
     3961 acgttggcag gcggtagccg ccgccaaggc ggatcttgcc ggcgtcggcg atggcggctg
     4021 acgtgacggg cgcggtcgtg cgattgctgc aaaacattga aatttccttg cttgttgaga
     4081 acacgtcaac ggggtcgggg ccgccaagct gccggccccg accgaaatcg tctcgatacg
     4141 cgttcctgaa acgtcgaagg ccttgtgtgc cgcctcgctt ccccttgggt gaggcggacg
     4201 gcttccaata cgcaagacat gactgtcccg ttgacgcatg caaggtagcg gaccgcctcg
     4261 cccgtgtcaa gctatttttt cctaatatcc tcgataataa gaaaacgatc ctcggtcagt
     4321 cgggcgtact tcctacgaag cagaatgtaa cggggctgga tgaccgcatt ctacagcgcg
     4381 tgggtccatg tctgcacacc aatgctcgac gcagcgacaa cgaaccaagt
//
LOCUS       DATAVD010000137         3342 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3363390, whole genome shotgun sequence.
ACCESSION   DATAVD010000137 DATAVD010000000
VERSION     DATAVD010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3342
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3363390"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..762)
                     /locus_tag="VHX39_02510"
     CDS             complement(<1..762)
                     /locus_tag="VHX39_02510"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3990026.1"
                     /translation="MNSQTTPELSRPLGVRAMEAAQGAPRLGAEITGIDLRRIDSVAF
                     EMIHRAWIDHQVLLFRDQQLTDLDLIAFSRRFGDLDHAPIQENGQRIANGMPEIYVVS
                     NVIENGVAIGSLGYGEAVWHTDMSYLTAPPKASMLYALEIPPSGGDTSFVDMYAAFDA
                     LPEALRQRAMGLRVKHDGTYNSGGYIRQGVTPTDDPRLAPGTLHPLVCTHPESGRRML
                     YLGRRKMAWLDGFDLAGSDALLDEIWQFATQPQFVW"
     gene            complement(865..1797)
                     /locus_tag="VHX39_02515"
     CDS             complement(865..1797)
                     /locus_tag="VHX39_02515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3990027.1"
                     /translation="MQGFSRPQLIAFVVMVGLIIVGPFVLYPVFLMRVLCAGLFACAF
                     NLMLGFVGLLSFGHAAFFGMGSYVTAWTMKFWHLDAFFAIGLGGLTGAVLGLCLGYLA
                     IKRSGIYFAMITLALAQLVYFVCLEAPFTGGEDGIQQVPRGHLFGFIDLSDDMTMYWV
                     VAVVFLGGFLMIHRIIHSPFGQVLKGIRENEPRATSLGYRTDDYKLIAFVLSCGLSGL
                     AGGTKALVFGIATLTDVNYPTSGEVVLTTLLGGLGTVFGPPMGAVIVTSMEQYLAQAG
                     AWVTVIQGAIFMICVLAFRRGVIGEIANWRKLTL"
     gene            complement(1798..2712)
                     /locus_tag="VHX39_02520"
     CDS             complement(1798..2712)
                     /locus_tag="VHX39_02520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3990028.1"
                     /translation="MDGILGYSFTFFGTTVSVSALLGQATLGLINGSFYACLSLGLAV
                     IFGMLNIINFAHGALFMMGAFVSWMLLNYLGIGYFPSLILAPLIVGAFGVVLEKTIIS
                     RLYKLDHLYGLLLTFGLALVIEGLFRNGYGSSGLPYRIPEVLTGAVNLGYMYMPKYRG
                     WVVICAAVVCFSTWAIIEKTSLGATLRAATENAPLVQAFGVNVPRLITLTYGAGIALA
                     AFAGVLAAPIYSVNPNMGSNFINTVFAVVVIGGMGSILGSIITGFGLGVIEGMTKVFY
                     PQASATVVFVVMIIILLTRPRGLFGKAA"
     gene            complement(2740..>3342)
                     /locus_tag="VHX39_02525"
     CDS             complement(2740..>3342)
                     /locus_tag="VHX39_02525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990029.1"
                     /translation="TSDFSSYLLQAQTSGAKVLGIANAGADTINTIKQAKEFGIKLRL
                     AGLLLFLTDIHSLGLDIAQGIVLTDSFYWDMNDRTRAFANRYSPSMNGARPTMVQAGV
                     YSSTLHYLKTASAMGVDKVKLDGAATIAAMKHMSTDDDCFGPGSIRADGRKLHPAFLW
                     EVKKPAESKGPWDYYKLLATTSADQAFRPIDKGGCPLVKS"
BASE COUNT          746 a         1052 c          979 g          565 t
ORIGIN      
        1 ccagacgaat tgcggctgcg tggcgaattg ccagatctcg tcaagcaatg cgtcggaccc
       61 cgcaaggtcg aacccgtcga gccacgccat cttgcggcgt cccagataca gcatccgccg
      121 tccgctctcc ggatgcgtgc aaaccagcgg atgcagcgtt cccggagcca aacgcggatc
      181 gtcggtcggg gtcacaccct gccgaatgta gccgccgctg ttataggtcc cgtcatgctt
      241 gacccgcagc cccatcgccc gttgccgcaa tgcttccggt aatgcatcga atgccgcgta
      301 catgtcgacg aatgatgtat cgccgccgga cggaggtatc tccagcgcat aaagcatgct
      361 cgccttggga ggcgcggtca gatacgacat gtcggtgtgc cacactgcct caccatagcc
      421 gaggctgccg atcgccacgc cgttttcgat cacattcgaa acgacataga tttccggcat
      481 tccattggcg atgcgctggc cgttctcctg aattggcgcg tggtccagat cgccgaaccg
      541 gcgggagaat gcgatcagat ccagatcggt cagctgctgg tcgcgaaaca gcaagacctg
      601 atggtcgatc caggcgcgat ggatcatttc gaaggccaca ctatcgatcc ggcgcagatc
      661 gatgccggtg atctccgcac cgagccgcgg cgcgccctgg gcggcttcca tcgcccgcac
      721 gccgagtggc cgcgaaagct cgggcgtcgt ttggctgttc atgggcctga ctcctctggc
      781 cgggggatga cggtcagccg tctgtatccc acaccagcga ggcaagggca aagcctgccc
      841 gcacctcaac tgaaacggcc gttgctaaag cgtcagcttc cgccagttgg cgatttcgcc
      901 aatcaccccg cggcggaacg ccagaacgca aatcataaag atcgcacctt ggatcaccgt
      961 cacccacgcc cccgcctggg caagatattg ttccatagaa gtgacgatca ccgcccccat
     1021 cgggggtccg aacacggtgc ccagtccgcc aagcagggtg gtcagcacga cctcgcccga
     1081 ggtggggtag ttcacgtcgg tcaacgttgc gatgccaaac accaacgcct tggtgccgcc
     1141 cgccaggccg ctcaggccac acgacaacac gaaggcaatc agcttgtaat catcggtgcg
     1201 atagcccaac gaggtcgccc gcggctcgtt ctcgcgaatg cccttcagca cctggccgaa
     1261 cggcgagtga atgatgcggt ggatcatcag gaacccaccc agaaacacca ccgcgacaac
     1321 ccaatacatg gtcatgtcgt cggacaaatc gatgaagccg aacaagtggc cgcgcgggac
     1381 ctgctggatg ccatcctcgc ccccggtgaa cggggcttcc agacacacga agtagaccaa
     1441 ctgtgccagc gccagtgtga tcatcgcgaa ataaatgccg gagcgcttga tcgccagata
     1501 gccaaggcac aatcccagta ccgcaccggt cagcccgccc agaccgatcg caaagaaagc
     1561 gtcgaggtgc caaaacttca tcgtccacgc cgtcacgtaa ctgcccatgc cgaagaacgc
     1621 cgcgtgaccg aacgacagca gcccgacaaa gcccaacatc aggttgaagg cgcaggcgaa
     1681 cagacccgcg cacagcacgc gcatcaggaa caccgggtaa agcacgaacg ggccgacgat
     1741 gatcagcccg accatcacca cgaacgcaat gagttgggga cgcgaaaacc cttgcattca
     1801 ggcggccttt ccgaacaggc cacgcggcct cgtcagcaga atgatgatca tcaccacgaa
     1861 cacgacggtg gccgaggcct gcgggtagaa caccttggtc atgccctcga tgacgccgag
     1921 accgaagccg gtgatgatcg agccgaggat cgaacccatg ccgccgatca ccacgacagc
     1981 gaacaccgtg ttgatgaaat tgctgcccat gttcggattg accgaataga tcggtgctgc
     2041 gagcacgccg gcgaacgccg cgagcgcgat gccggcgcca taggtcaatg tgatcagtcg
     2101 cggcacgttg accccgaacg cctgtaccag cggtgcattc tcggttgccg cgcgtaacgt
     2161 tgcaccaagc gaggtttttt cgatgatggc ccaggtggag aaacacacga cggcggcgca
     2221 gatgacaacc cagccgcggt atttcggcat gtacatgtag ccaaggttga cggcgccggt
     2281 cagcacctcg gggatgcgat agggcaggcc ggaactgccg tagccgttgc ggaacaggcc
     2341 ctcgattacc aaagcgaggc cgaaggtcaa cagcaggcca tacaaatggt cgagtttata
     2401 aagccggctg atgatggttt tttccagcac gacgccgaag gctccgacga tcagcggcgc
     2461 caggatgagg ctggggaaat aaccgatgcc gaggtagttc agcagcatcc aggacacgaa
     2521 ggcgcccatc atgaacagcg cgccatgggc gaagttgatg atattcagca tgccgaagat
     2581 gacggcgagg ccaagcgaaa ggcaggcgta gaatgagccg ttgatcaggc caagcgtcgc
     2641 ctggccaagc aatgctgaaa ccgacaccgt ggtcccgaag aacgtaaaac tatagcccag
     2701 aattccgtcc attcgcgtca gaccttcaga tgcgacaaat cagcttttca ccagcgggca
     2761 gccacctttg tcgatcgggc gaaacgcctg atcggccgag gtggtggcca gcaacttgta
     2821 atagtcccag ggacccttgc tctcggccgg ctttttgact tcccacagga aggccgggtg
     2881 cagcttgcgt ccgtcagcgc ggatcgaccc tggtccgaaa caatcgtcgt cggtggacat
     2941 gtgcttcatt gccgcgatcg tcgcggcacc gtcgagcttc accttgtcca cgcccatcgc
     3001 gctcgccgtc ttcaggtaat gcaatgtcga ggaatacacg ccggcctgca ccatggtcgg
     3061 ccgcgcgccg ttcatactgg gcgagtagcg gttggcgaag gcccgggtcc ggtcgttcat
     3121 gtcccaatag aaactatcgg tcagcacgat cccctgcgcg atatccagtc caagcgaatg
     3181 aatgtcggtc aggaacagca gcagaccggc gagccgcagc ttgatgccga actccttggc
     3241 ctgcttgatc gtgttgatcg tatcggcgcc ggcgttggca atcccgagca cttttgcgcc
     3301 gctcgtctgc gcctgcagca gatacgagga gaaatccgag gt
//
LOCUS       DATAVD010000138         4311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1128437, whole genome shotgun sequence.
ACCESSION   DATAVD010000138 DATAVD010000000
VERSION     DATAVD010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4311
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1128437"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..950
                     /locus_tag="VHX39_02530"
     CDS             <1..950
                     /locus_tag="VHX39_02530"
                     /inference="COORDINATES: protein motif:HMM:NF039910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX3990030.1"
                     /translation="RFKDKIAVKAYPVRVLGGLLWTYMGPDPAPCLPDWEPFSWKNGF
                     VQIVFAEVPCNWLQAQENSIDPVHFEWMHSNWSVRLGGQTGPYGPRHLKVEFEEFEHG
                     LLYKRIREDTDEASELWTVGRVCLWPNALFTGSHFEWRVPIDDATTLSVTWMFARVPK
                     EREPYVQETIPHWYGPVKDADGNWINSHVMNQDFIAWSGQGTIADRTKEHLGRSDRGI
                     VMMRKRFLDDIDAMRDGNDPKAVIRDPARNRNVRLPTVSRDLLLNGLTMEQVMANPAR
                     SGTITPGSYVFQAGQPERVRRAMQDALGRKITLDGVVKA"
     gene            969..1976
                     /locus_tag="VHX39_02535"
     CDS             969..1976
                     /locus_tag="VHX39_02535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HEX3990031.1"
                     /translation="MRKFFGPMGTVTRLNVASEVLKANILGDPSTRAVDVYVPAGHDG
                     SGLPLLVELVGITSSGLSQTNWQGFRENMPERLDRLIGEQRMKPAVVAFPDCFTRIGG
                     NQYINSAATGAWEDFLTREMLSAIEQRFGCGGQGRRGVYGKSSGGYGAIMHALRHSDV
                     WSAAACHSGDMGFELCYLPDMPATLRALAGAGNSIEQWWRKLEDATKRPDGIFTALNV
                     LAMAASYDPDPSEFLGMRLPVTFDTCEVIEDRWANWMRHDPVVAVETLGGNLRNLKAL
                     YIDCGERDQFNLLYGARRLARRLRELGITHRYEEFPDNHSGVEYRLDESLPFLVEALI
                     S"
     gene            1976..2356
                     /locus_tag="VHX39_02540"
     CDS             1976..2356
                     /locus_tag="VHX39_02540"
                     /inference="COORDINATES: protein motif:HMM:NF021525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2255 family protein"
                     /protein_id="HEX3990032.1"
                     /translation="MAQFEQDALEWLRTNKEVTILTAKHPDTAVIIWAVVAADDAVYV
                     RSVRGERGRWYRDLASDGRATLRVNDRNIQVQAIPAADDVSVARASEAFSAKYRGSAH
                     VGSIVRTEVLATTLRLEPLPDRTA"
     gene            2456..4066
                     /locus_tag="VHX39_02545"
     CDS             2456..4066
                     /locus_tag="VHX39_02545"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3990033.1"
                     /translation="MTTTNETQFDAIVIGAGISGLYQLYRLRELGLRVLVLEAGTGVG
                     GTWYWNRYPGARFDSESYSYAYSFSPELLAEWNWTEHFSPQPETLRYLNHAADRFDLR
                     RDIRFRSRVASAHYQDAARAWDVTLEDGTSFRSRFLITAIGVLSAPVMPRIEGVETFT
                     GESFHTARWPHQPVSFEGKRVAVIGTGATGVQTIQEVAKTAGHLTVFQRTPNWCTPLH
                     NRKIDAAEMAQLKAGYPEMFKRCQETFACFLHTPDPRGTFEVTPEEREAFFEKLYASP
                     GFGIWQGNFKDILTNREANAAISDFVASKIRQRVKDPQVAEKLIPRDHGFGTRRVPME
                     TFYYEVYNQPNVQLVDIKETPIERITPRGIKTTNADFEFDIIIFATGFDAITGAFDRI
                     DIRGENGLRLKDKWAGGPKTYLGVMVEDFPNMMMLMGPHTALGNLPRSIEYNVEWVTG
                     VLRHARDHRLTRVAATAVGVGSWTDHVKSLGVGLLSNEVDSWMTGVNRNIDGKDTRII
                     ARYSGSAPAYRARCDQVAAESYRELALA"
     gene            4091..>4311
                     /locus_tag="VHX39_02550"
     CDS             4091..>4311
                     /locus_tag="VHX39_02550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilotriacetate monooxygenase"
                     /protein_id="HEX3990034.1"
                     /translation="MARGKMRLGLSIRGHGYHPAAWRHPDVPADGPQHVEHYVRSAQI
                     AERGKLDMIFFADGAGIRQGDNPPGTLSRT"
BASE COUNT          862 a         1308 c         1342 g          799 t
ORIGIN      
        1 cccgcttcaa ggacaagatt gcagtcaagg cctatccggt gcgcgtcctg ggcgggctgc
       61 tctggaccta catggggccc gatccggcgc cctgcctgcc ggattgggag ccgttcagct
      121 ggaagaacgg cttcgtccag atcgtcttcg ccgaggtccc ctgcaactgg ctgcaggccc
      181 aggagaactc catcgacccg gtccacttcg agtggatgca ctccaactgg agcgtgcgcc
      241 tgggcggcca gaccggcccc tatggtccgc ggcacctgaa ggtcgagttc gaggagttcg
      301 agcacgggct gctctacaaa cgcatccgcg aggacaccga cgaggccagc gaattgtgga
      361 ccgtcggccg cgtctgcctg tggccgaacg cactgtttac cggttcgcat ttcgaatgga
      421 gggtgccgat cgatgacgca acgacgttga gcgtcacctg gatgttcgcg cgggtgccaa
      481 aggaacgcga accttacgtt caggaaacta tcccacactg gtacggtccg gtgaaggacg
      541 ccgacggcaa ctggatcaac agccacgtca tgaatcagga cttcatcgca tggtctgggc
      601 agggaacgat tgcggatcga accaaagaac accttggccg tagcgatcgc ggcatcgtga
      661 tgatgcgcaa acgatttctt gacgatatcg atgcaatgcg cgacggcaac gaccccaagg
      721 cggtgatccg cgatccggcg cgtaaccgaa acgtgagact gccgacggtc agccgcgacc
      781 tgctgctgaa tgggctgaca atggagcagg tcatggccaa tccggcccgc tcgggcacca
      841 tcacgcccgg cagctacgtc ttccaggccg gccagccgga acgtgtgcgt cgcgccatgc
      901 aggacgcact tggccgcaag atcaccctgg acggcgtcgt caaagcgtaa ctgccgagag
      961 gaacagtcat gcgtaaattc ttcggaccga tggggacggt gactcgtctt aacgtcgcca
     1021 gcgaagtgct gaaagccaat atcctcggcg atccctcgac acgcgcggtc gatgtgtacg
     1081 ttcctgccgg ccatgacgga agcgggctgc ctttgctggt cgagctcgtc ggcatcacca
     1141 gtagtggcct gtcgcagacc aattggcagg gctttcgcga aaatatgccg gaacgcctcg
     1201 atcgcctgat tggtgagcag cggatgaaac cggcggtcgt tgcctttccg gattgcttta
     1261 cccggatcgg cggcaatcag tacatcaact cggctgcgac cggcgcctgg gaagacttcc
     1321 tgacccggga aatgctgtcc gcgatcgagc aacggtttgg atgcggcggg cagggacgtc
     1381 gcggcgttta tggcaagagc tccggtggct acggggcgat catgcacgcg ttgcggcact
     1441 ccgacgtttg gtcggcggca gcgtgccact cgggcgatat gggattcgag ttatgttatc
     1501 tgcccgatat gccggccacc cttcgcgccc tcgccggtgc cggcaattcg atcgaacaat
     1561 ggtggcgcaa gcttgaggac gcaacgaaac gccctgacgg catcttcacc gctctgaacg
     1621 ttctggcgat ggcggccagc tacgatccgg atccgagcga gttcctcggg atgcggttgc
     1681 cggtcacatt cgacacctgt gaggtgatcg aagaccgttg ggcgaactgg atgcgccacg
     1741 atccggtcgt cgcggtcgag actcttggcg gcaatctgag gaacctcaaa gcgctctata
     1801 tcgactgtgg ggaacgcgat cagttcaatt tgctgtatgg cgctcgccgg ttggcgcggc
     1861 ggttgcggga gcttggcata acccaccgct atgaagagtt ccccgataac cacagcgggg
     1921 tcgaataccg gttggatgaa agtctgccgt tcctggtcga ggcgttgata agctgatggc
     1981 gcagttcgag caggacgctc tggaatggtt gcggaccaac aaggaagtga ccatcctgac
     2041 ggcgaaacat ccggatacgg cggtcatcat ctgggctgtc gtggcagccg atgatgcggt
     2101 gtacgtgcgc tcggtgaggg gcgagcgggg acgctggtat cgcgacctcg cctccgacgg
     2161 gcgcgccacg ttgcgggtga acgaccgaaa catccaggtg caagcaatcc cggcggcgga
     2221 tgacgtgtcg gtcgcgcggg ccagtgaggc gttttccgcc aaatatcggg gcagcgctca
     2281 cgtgggctcc atcgttcgga ctgaagtgct ggcgaccact ttgcgtttgg aaccccttcc
     2341 ggaccgcacc gcctgacagt tgccggaatg ccgggtctgt gccatagcta ctggtcagta
     2401 gtcaatccaa ccagtcggtt gggacacgcc gcacgaaccg gagcaaagac cgcagatgac
     2461 caccacgaac gaaacccaat ttgacgccat cgtcatcggc gctggcatct ccggcctgta
     2521 tcagctctat cgtttgcgcg aactgggtct gcgcgtgctg gtgcttgaag caggcaccgg
     2581 cgtcggcggc acctggtact ggaaccgtta ccccggcgcg cgtttcgatt ccgaaagcta
     2641 ttcttacgcc tactcgtttt ccccggaact gttggcggaa tggaactgga ccgagcattt
     2701 ctcaccgcaa cccgaaacgt tgcgctatct gaaccatgcc gccgaccgct tcgacctgcg
     2761 ccgcgacatt cggtttcgca gccgggtcgc cagcgcacac taccaggacg cagcccgagc
     2821 ctgggacgtg actctggaag atggcacaag tttccgctcg cgctttctga tcaccgccat
     2881 tggtgtgttg tcggcgccgg tcatgccgcg catcgaaggg gtcgagacat tcacaggaga
     2941 atccttccac accgcccgct ggccgcacca gccggtcagc ttcgaaggca agcgcgtcgc
     3001 ggtgatcggc accggcgcca cgggcgtgca gaccatccag gaagtcgcca agaccgccgg
     3061 tcacctgacc gtgttccaac gcaccccgaa ctggtgcacg ccactgcaca accgcaaaat
     3121 cgacgccgct gaaatggctc aactcaaagc cggttatccg gagatgttca aacgctgcca
     3181 ggaaaccttc gcctgtttcc tgcacacgcc cgaccctcgc ggcaccttcg aggtaacgcc
     3241 ggaagaacgc gaggcgttct ttgagaaact ctacgcgtct cccggctttg gtatctggca
     3301 gggcaatttc aaggacatcc tgaccaaccg ggaggccaat gccgcgatca gcgatttcgt
     3361 tgcaagtaag atccgccagc gcgtgaagga tccgcaggtc gccgaaaagc tcattccaag
     3421 agatcacggc ttcggcacac gccgcgtgcc gatggaaacg ttttattacg aagtctacaa
     3481 ccaaccgaat gtgcagctcg tggacatcaa ggaaacgcca atcgagcgga tcacgccgcg
     3541 cggcatcaaa accaccaacg ccgatttcga gtttgatatc atcatctttg ccaccggctt
     3601 cgacgccatc accggcgcgt tcgaccgcat tgacatcagg ggcgagaacg ggctgcggct
     3661 gaaggacaaa tgggcgggcg ggccgaagac ttacctcggt gtcatggtcg aagattttcc
     3721 gaatatgatg atgctcatgg gtcctcatac tgccctgggc aatttgccca gaagcatcga
     3781 gtataatgtt gaatgggtga ctggcgtgct gcggcacgcg cgagaccatc gtttaacccg
     3841 cgtcgcagcc actgcagtcg gggtagggtc ctggaccgac catgtgaagt ccctcggcgt
     3901 gggactgttg tccaatgagg tcgattcctg gatgaccggc gtcaaccgca atatcgacgg
     3961 caaggacacc cgcatcatcg cgcgctacag tggcagcgcg ccggcgtatc gggcgcgttg
     4021 cgaccaggtg gcggcggagt cctatcgaga actcgcgctg gcctgacctg ccggccggga
     4081 gaagaccgcg atggcgcgag gcaaaatgcg actgggcttg tcgatccgtg gtcatggcta
     4141 ccatccggcg gcatggcggc acccggatgt accggccgac ggcccacaac atgtcgagca
     4201 ttacgtgcgc agcgcgcaga tcgccgagcg cggcaagctc gatatgatct ttttcgctga
     4261 cggcgccggc atccgtcagg gcgacaatcc gcccggcacg ctgtctcgta c
//
LOCUS       DATAVD010000139         1828 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3550301, whole genome shotgun sequence.
ACCESSION   DATAVD010000139 DATAVD010000000
VERSION     DATAVD010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3550301"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            87..1580
                     /locus_tag="VHX39_02555"
     CDS             87..1580
                     /locus_tag="VHX39_02555"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3990035.1"
                     /translation="MRTPLNLSRRQLIAGAGAGALLLQQRSQAQSAAGTTVVFSHITV
                     VAADAVHNDVALAVDGDKIAAIGTTEEILRTYPRAEVYDGRGKALFPGLINCHAHLAA
                     TLARGFNEDFGFPNSMHLAVQPNSLISKEESTLMVTMGALEAIRSGTTTIVENAGGIA
                     GSATALAQTGLRCVFAESARDRENGSGPMSPESFAKSQTPRFSPKLRDEGMQRIDDLF
                     TTWHGAKQGRISVFPAVSLAEDGSPELMHAVRSFAEKHDLGYTVHLNQSHAEIDFMVK
                     YHGVRPATFLYQNDFLGPRLFAAHCRYVDDGEIALLGKTGTIISHQAAMAANRGVIPP
                     IPALRAAGCPIANGTDNNTNDMFEVMRVALLTERIRRNDPFPGVRPQPEDILEDATVG
                     GARAVRQEKLVGSIEVGKKADIIVLDTQRAHLVPAGRIVSAWIHNGQPSDIESVMVDG
                     QFVMRNRKVLTMDEASLIAEADKVGRRVWGQVLAAGPVPVPRLPRPL"
BASE COUNT          363 a          535 c          588 g          342 t
ORIGIN      
        1 gcccccctgt cgatcggctt cgaaacgccc cgtacgcata aggttcagcc gtgaagctcc
       61 tttggaatac caaagccgga gaaactatgc gtacacctct caatctcagc aggcggcaac
      121 tgatcgcggg cgccggggcg ggagccctgc tccttcagca acgcagtcag gctcaatcgg
      181 cggcaggcac gacggtcgtc ttttctcata taaccgtggt ggccgccgac gcggttcata
      241 atgatgtggc gctcgcggtc gacggcgata agatcgcggc gatcggcacc accgaagaga
      301 ttctcaggac atatccacgt gccgaggttt acgacgggcg gggaaaagcc ctgttcccgg
      361 gcctcatcaa ctgtcacgcc catctggcgg caacgctcgc gcgtggcttc aatgaagact
      421 tcggattccc caactccatg cacctggcgg ttcaacccaa cagcttgatc tccaaagagg
      481 aatcgactct gatggtgaca atgggcgctc tggaagccat acggtccggg accaccacca
      541 ttgttgaaaa tgccggcggg attgccggtt ctgcgacagc actggcccag acaggcttgc
      601 gctgcgtgtt tgccgagtcc gcgcgcgaca gggagaatgg gtccggcccg atgtcgccgg
      661 aatcgttcgc caaaagccag acgcccaggt tttcgcctaa gttgagagac gaggggatgc
      721 agcgcatcga cgacctgttc accacgtggc acggcgcgaa gcagggacgc atcagcgtgt
      781 tcccggccgt ctcgctcgcg gaggacggat cgcccgaact gatgcacgcc gtccgctcgt
      841 tcgcggagaa acacgatctc gggtatacgg tccaccttaa tcagagccat gccgagatcg
      901 atttcatggt caaataccat ggcgttcgtc cggcgacctt cctctatcag aacgatttcc
      961 tcggtccgcg gctgttcgcg gcgcactgcc ggtacgtgga cgacggcgag atcgcattgc
     1021 ttggcaagac gggcaccatc atttcgcacc aggctgccat ggcggctaac cggggggtga
     1081 tcccacccat tcccgcactg cgagcggcag gctgcccaat cgccaacggt accgataaca
     1141 acacgaatga catgtttgag gtgatgcggg tagctctgct gacggagaga atccggcgca
     1201 acgatccgtt ccccggcgtg cggcctcagc cggaagacat cctcgaagac gcgacggttg
     1261 ggggagcgag ggcagtgcgg caggagaagc ttgtcggttc gatcgaggtg gggaagaagg
     1321 cggacatcat tgtgctggat acgcagcggg cgcaccttgt gccggcgggg cgcatcgtgt
     1381 ccgcgtggat ccacaatggt cagccgtccg acatcgaatc ggtgatggtc gatggccagt
     1441 tcgttatgcg caaccgcaag gtcctcacga tggatgaagc tagtctgatc gcggaagccg
     1501 ataaggttgg ccggcgggtc tggggacagg tgctggcggc tggccctgtt ccggtgccac
     1561 ggctaccgcg cccgctgtga ggatgcgggg tttggggcgg caggggctta cggaactgga
     1621 gttgggaggg ttggaacccg cgacgtctgg cttggaaact ggcccctaat ggcagggggc
     1681 gtaatgccca ttgctgatag ctcctgcggg aaaccttcac agaaactatt cagccggcgc
     1741 ccgaaacgcg ccagtttagg cgcttgaagc ggatctcccc ttgtggacgg ctcatatagg
     1801 cgaagcttga accgttttct tgacggat
//
LOCUS       DATAVD010000140         2210 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1128615, whole genome shotgun sequence.
ACCESSION   DATAVD010000140 DATAVD010000000
VERSION     DATAVD010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2210
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1128615"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..715
                     /locus_tag="VHX39_02560"
     CDS             <1..715
                     /locus_tag="VHX39_02560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990036.1"
                     /translation="TRAFRSEPPIPTRHTKVPILFLARLAHQHNFPGIATQTGRSAMD
                     LSAYLLDQAIAATTPPGETEADARTRAEAIAEMLRAYAPGDMLETMMACQCIMMQFVA
                     AAAMRDASNPRQEPATLAKARAGAITASRALHQWVTKFENQRKRNELRAAQLAKAELA
                     KAGAAKVAAAKVETGAKPGPQTPPDVPEPQSSVVTTAPAAVRNGQITDDDVVTNQLLA
                     AAAEMRAASHVSGSARPGS"
     gene            complement(750..2108)
                     /locus_tag="VHX39_02565"
     CDS             complement(750..2108)
                     /locus_tag="VHX39_02565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
                     /protein_id="HEX3990037.1"
                     /translation="MSRLVVVSNRVAPIQEGEATAGGLAAGVLDALRHKGGLWLGWSG
                     NIRDVPEQQPEHAVGAISLFTIDLSRQDYDEYYRGFANGTLWPVLHYQIGLGRFEWPE
                     YDGYRRVNGLFAQALAKLVREDDLVWVHDYQLLYVAEAARASGLTNRIGLFLHTPFPA
                     PGVFMTIPAHADLFRAMCQYDLLGFQTEVDRAAFIDYAVRHAGGSVHGDRLSIFDRVV
                     RTGVYPIGVHVDEVRASAELPRNRRQATRIRAALLDRLILSVDRLDYSKGLPQRFASF
                     ERFLADYPAHHGLVTFMQIAPPSRSDIETYQAIRRQLEGEAGRINGRFAEVDWVPLRY
                     LNKSFERAVLMPLYAAAQACLVTPLRDGMNLVAKEFVAAQDPDDPGVLILSEFAGAAR
                     ELRDALVINPYDEAGVAAAIDRALLMPLEERQERHQAMLAVMRENSLERWRDRFEADL
                     RG"
BASE COUNT          448 a          772 c          649 g          341 t
ORIGIN      
        1 cacccgtgcg ttccggtcag aaccgccgat tcccactcgg cacacaaaag ttcctatttt
       61 gttcttggcg cggttggcgc accagcataa tttccctggc atcgccaccc aaaccggacg
      121 atctgccatg gatctcagcg cttacctgct cgaccaggcc attgccgcga ccacgccgcc
      181 cggcgagacc gaagccgatg cgcgaacccg cgccgaggcg atcgccgaga tgctgcgcgc
      241 ctatgctccc ggtgacatgc tggagaccat gatggcatgc caatgcatca tgatgcagtt
      301 tgtcgcagcc gctgccatgc gcgatgcgag caatccgcgt caggagcccg caaccctcgc
      361 caaagcccgc gccggagcga tcaccgccag ccgtgcgcta catcaatggg tcacgaaatt
      421 cgaaaaccag cgcaagcgca acgaactccg cgccgcccag ttggcaaagg ctgagttggc
      481 gaaggctggg gctgcaaagg ttgcggcggc gaaggtcgaa actggcgcga aacccggacc
      541 gcaaacgccg ccagacgtgc cggaaccgca atcctctgtc gtaacgaccg cccccgcggc
      601 cgtgcgaaac ggccaaatta cggacgacga cgtcgtaacg aaccaattgc ttgccgccgc
      661 ggccgagatg cgagcagcgt cacatgtctc gggctctgcc aggccggggt catgaccggt
      721 gcgagaggca ctgcccggcg cctgacattt caaccccgta aatccgcctc gaaccgatcc
      781 cgccagcgtt ccagactgtt ctcccgcatt accgccagca tcgcctggtg gcgctcctga
      841 cgctcctcga gcggcatcag caacgcgcga tcgatcgctg ccgcaacccc cgcctcatca
      901 tacgggttga tcaccagcgc atcgcgcaac tcccgagccg ccccggcgaa ctccgacaaa
      961 atcagcaccc cgggatcgtc cgggtcctgg gctgccacga actccttcgc caccaggttc
     1021 atgccgtcgc gcaacggagt caccagacag gcctgcgccg ccgcataaag cggcatcagc
     1081 acggcgcgct cgaaactttt gttcaaatag cgcaacggca cccagtcgac ctcggcgaac
     1141 cggccgttga tgcggcccgc ttcgccctcc aattgccggc gaatcgcctg ataagtctcg
     1201 atatccgaac gcgacggcgg cgcgatctgc atgaacgtca ccagaccgtg atgcgcggga
     1261 tagtctgcca gaaagcgctc gaacgaggcg aagcgttgcg gcaggccttt cgagtagtcc
     1321 agccggtcca cactcaaaat caaccggtcc agcagagccg ctctgatccg ggtcgcctgc
     1381 cgccggttgc gcggcaactc ggccgaggcg cggacttcat cgacatgcac gccgatcgga
     1441 tacactccgg tgcgcaccac ccggtcgaat atcgacagac ggtcgccgtg caccgagccg
     1501 ccggcatgcc gcacggcata atcgataaac gccgcgcgat cgacttcggt ctggaagccc
     1561 aacagatcgt actggcacat cgcgcggaac aaatccgcat gcgccgggat cgtcatgaac
     1621 acgcccggcg cggggaacgg cgtgtgcaga aacagtccga tccggttggt cagcccagag
     1681 gcgcgcgctg cctcggccac gtacaacaac tggtaatcgt gcacccagac cagatcatct
     1741 tccctcacca acttcgccag cgcctgggcg aacaatccgt tgacccggcg gtagccgtcg
     1801 tattccggcc actcgaaccg gccgagaccg atctggtaat gcagcaccgg ccataacgtg
     1861 ccattggcga agccgcggta atattcgtcg tagtcctgcc gcgacaaatc gatggtgaac
     1921 agggaaatcg caccgaccgc gtgctccggc tgctgttccg gcacgtcgcg gatgttgccg
     1981 ctccagccca accacagccc gcccttgtgg cgcaatgcgt cgagcacgcc tgcggccaga
     2041 ccacccgcgg tggcctcgcc ttcctggatc ggcgcgaccc ggttggaaac aacgacaagg
     2101 cgagacatgg aatccgagga ccttcgacgg cggcacccga caggatgaca ggcttcgggt
     2161 caatgggcta tcgcggcggg gtggtggact ggcaggcgtt cggggctccg
//
LOCUS       DATAVD010000141         2818 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1128621, whole genome shotgun sequence.
ACCESSION   DATAVD010000141 DATAVD010000000
VERSION     DATAVD010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2818
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1128621"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1425)
                     /gene="pyk"
                     /locus_tag="VHX39_02570"
     CDS             complement(<1..1425)
                     /gene="pyk"
                     /locus_tag="VHX39_02570"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEX3990038.1"
                     /translation="MAARPKLRRRRRTKIIATLGPASSSPEVLARLFQAGADVFRLNF
                     SHGTHEDHAARFAMIREMEEKFDRPIGILADVQGPKLRVGRFAAGRAHLQTGRPFRLD
                     LTATPGDSNRVNLPHPEIIEAATIGCMLLVDDGKLRLRVVHKRPDALETEIVVGGPIS
                     DNKGVNVPDVVLPIPALTEKDRLDLEFAVSHGANYIGLSFVQRAQDVAEAKELIGDRA
                     WTMVKLEKPQALDNLDAILALTDAVMVARGDLGVELPPEEVPLAQKRIVRLARQLGKP
                     VVVATQMLESMITAPAPTRAEASDVATAVYDGADAVMLSGETAAGQYPYEAVNMMDRI
                     VARVEQDAGWRSMIDSSRPAPEHSAAGAIASAASQVVHTIGARAIVAFTASGSTALRV
                     ARERPDSPVIGLTPLLDTARRMAVVWGVHAVVVPEVHSMGEAVNRAARVALTEGFATR
                     GEEIVVVAGVPFGQAGTTNALRVTT"
     gene            complement(1436..2713)
                     /locus_tag="VHX39_02575"
     CDS             complement(1436..2713)
                     /locus_tag="VHX39_02575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEX3990039.1"
                     /translation="MTWDDVRARTALRRLYDTAVAASDPRRVLAAHLPKKPSGGRCIV
                     VGGGKSAAVMAASLEEAWPDVALRGAVVTRYGHAVPTRRIEVIEASHPVPDANSERGA
                     RRLLELVQNLTPQDLVIALMSGGASALLAAPAPGLTLDDKQAINRALLACGASIGDMN
                     TVRKHLSAIKGGRLAAAAAPAQVVTLAISDVPGDDPAVIGSGPTVPDPTTFADARALI
                     ERYGITLSAAAMARLQQEADETPKPDDLPPTDFRLIATPMMALRAAAAQARDMGLTPV
                     ILGDALEGEAEDVGIVHAGIARSIQRHGEPAAPPVVLLSGGETTVTMKPHAAGRGGRN
                     TTFLLGLALKLDGCAGIWAIAGDTDGIDGMDDVAGAMLAPDTLARVRAKGLNPRAMLA
                     EHDSHGLFDAVGDAFRIGPTLTNVNDFRAILIA"
BASE COUNT          531 a          922 c          859 g          506 t
ORIGIN      
        1 ggtcgtgacc cgaagcgcat tggtcgttcc agcctggccg aacggcacac cggcgacaac
       61 aacgatctcc tcgccacggg tggcgaaccc ttccgtcaac gcgactcgcg ccgcacggtt
      121 gaccgcctcg cccatggaat gaacctccgg cacaacgacc gcgtgtaccc cccagaccac
      181 agccatcctt cgggccgtat ccagcaaggg agtcaaccca atcactggcg agtccgggcg
      241 ttcacgtgcc acgcgtaatg ccgtactacc cgatgcggta aaggccacaa tggcgcgcgc
      301 gccgatcgta tgaaccacct gactggccgc ggatgcgatt gcgcctgccg cagaatgttc
      361 gggtgcaggc cttgatgaat cgatcatgga tcgccagccg gcgtcctgtt ccacacgagc
      421 aacgatacgg tccatcatat tgaccgcctc gtaggggtac tgcccagcgg cggtctcgcc
      481 cgatagcatg accgcgtcag caccgtcgta taccgctgtc gcgacgtccg aggcttccgc
      541 ccgtgtgggc gcgggcgccg ttatcatgct ctcgagcatt tgggttgcca ccacgaccgg
      601 cttgccaagc tggcgggcca atcggacgat ccgcttttgt gcaagcggca cttcttcagg
      661 cggcaattcg acgccaagat cgccccgcgc gaccatgaca gcatcggtca gcgcgaggat
      721 tgcgtcgaga ttgtccaacg cctgcggttt ctcgagcttc accatggtcc aggcccggtc
      781 gccaatcagt tccttcgcct ctgccacatc ttgtgcgcgc tgcacgaagg aaagaccgat
      841 gtagttggcg ccatgactga cggcgaactc caggtccaaa cgatccttct cggtcagcgc
      901 gggaattggc aggacgacgt cgggaacgtt gacgccttta ttgtcggaaa tggggccgcc
      961 gaccacgatt tcggtttcca gggcatcggg gcgcttatgc acaacccgaa gccgcagttt
     1021 gccatcatcg accagcagca tgcatccgat cgtcgcagcc tcgatgatct ctggatgcgg
     1081 caggttgaca cggttggagt ctcctggcgt ggcggtcagg tccagtcgaa atggccggcc
     1141 ggtctgcaaa tgcgctcgtc cggcagcgaa ccggccaacc cgcaacttag gcccttgaac
     1201 gtcagccaaa atgccgattg gacgatcaaa cttctcctcc atctcgcgga tcatcgcaaa
     1261 acgcgcggcg tggtcttcat gggtgccgtg cgagaagttc aaacggaaca cgtctgcacc
     1321 ggcctgaaac aaccgtgcca aaacctccgg tgaggaactg gccggtccaa gtgtggcgat
     1381 gattttcgta cggcgccggc ggcgcagctt ggggcgtgct gccatggaat ctccttcagg
     1441 cgatcagtat ggcgcggaaa tcgttgacgt tggtcagcgt tggaccaatt cgaaacgcat
     1501 cgccgacggc gtcgaataac ccgtgactgt cgtgctcggc gagcatggcc cgcgggttca
     1561 accccttcgc ccgaactctg gccagcgtat ccggtgccaa catggctccg gcgacgtcat
     1621 ccatgccgtc gatcccgtcg gtatcgccgg cgatagccca gatgccggcg catccatcca
     1681 gcttgagggc gaggccaagc aagaacgtcg tattgcggcc gcctcgaccc gcggcgtgcg
     1741 gtttcatcgt gacagtcgtc tcgccgcctg acagcagtac cacgggaggc gcggccggtt
     1801 cgccgtggcg ctggatcgag cgggcaatgc cagcgtgaac gatgcccaca tcttctgcct
     1861 cgccctcgag cgcgtccccc aaaatcaccg gcgtcagacc catgtccctt gcctgtgcgg
     1921 cagcagcccg aagcgccatc atgggcgtcg cgatcaaacg aaagtcggta ggcggcagat
     1981 cgtctggttt tggggtttcg tcggcctcct gctgcaaccg tgccattgcg gcggccgaca
     2041 gggtgatccc atagcgctcg atcagggccc gcgcatcggc gaatgttgtc ggatcaggga
     2101 cagtggggcc ggaaccaatg acggccggat cgtcccctgg cacgtcgctg atcgccagcg
     2161 tcaccacctg agccggcgcg gcggcggcgg caagccgtcc ccctttgatc gccgaaagat
     2221 gttttcgaac cgtgttcata tcgccgatac tggcaccgca ggccaacaag gctcgattaa
     2281 tcgcctgctt gtcgtccaac gtcaggcccg gcgctggagc agccagtagc gccgatgcgc
     2341 caccggacat caatgcgatg accaaatcct ggggggtcag gttctggacg agttccagaa
     2401 gacgccgtgc tccacgctcg ctattggcgt ccggcacggg atgcgatgct tcgatcacct
     2461 cgatgcggcg agtcggaaca gcgtggccgt agcgggtcac cacggcacct cgcaaagcga
     2521 catccggcca tgcctcttcg agggaggctg ccataacggc ggccgacttg ccgccaccaa
     2581 cgacgatgca acgcccgccg ctgggctttt tgggtaaatg cgcggccagc acgcggcgcg
     2641 ggtcggaggc ggcaaccgct gtgtcgtaca agcggcgcaa agccgtgcga gctcgcacgt
     2701 cgtcccaggt catggcttgc tatctcccac cggacgcggc gaaactatgg cggatcgtga
     2761 tcgtcgacac caatttagcc gtgacgacag gagtaatacc atgcccgcac ccgaaacc
//
LOCUS       DATAVD010000142         1515 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_943262, whole genome shotgun sequence.
ACCESSION   DATAVD010000142 DATAVD010000000
VERSION     DATAVD010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_943262"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            538..840
                     /locus_tag="VHX39_02580"
     CDS             538..840
                     /locus_tag="VHX39_02580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990040.1"
                     /translation="MTDGFSPAGRPMPPRSDNEPRIEWDVATAVSHACNIATSTAGKD
                     DVVINVGVASAAHGRQSEVSADLTKRFALPPRTARALRDMLREVIANIDADRHHRP"
     gene            837..>1515
                     /locus_tag="VHX39_02585"
     CDS             837..>1515
                     /locus_tag="VHX39_02585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEX3990041.1"
                     /translation="MSETPFAPLAAASRPDYLVVDDFLRGFVEARVLKTAFEVGLIDR
                     LLEHGTGSVAALAPVVGLDQAGLRFLLDLLAAAGVVQEARGDVRLTRRFQDALRYRDL
                     LEVKLDYAGFTINDFADLFTPLVQTPSGFTSKARLFELFDYRRALDPTFENYARTRMW
                     VRLTSTLTRYEAPPCLDVHDIGSHRRMLDVGGNNGEFAVQACRRHPSLRATVFDLPLI
                     CELGLDHV"
BASE COUNT          283 a          472 c          475 g          285 t
ORIGIN      
        1 tccgcctccg ggcaagcacg gcatcacagt ttcagcggac cgaactcctg ggccctcctt
       61 gccacaccat gaagcagcga gaccagtact tccgttccgc tggcaaacag agcccccgga
      121 ttcctcaagc gagcgggtat accagcccgc cgaaagacgg atcggcgccc atttggcgaa
      181 gccgaccggt atagtgggcg gattcaggca gtcggcccaa tcagcgccgg gcatcaaggg
      241 tcgccaccaa tcgcctcggc gttgtgcgca ctgagatcgg tgccttcggg aaaatgctgg
      301 cgcagcagcc cattcagcca aaccgagcct atacccaagc aactgagcat gtgaggattc
      361 gtgagggcgc ccccaaaata ctcatcgccc ttccgccaac ggatgccaag gaaatcgctc
      421 gatttctgat gacaacgggc cgagctttgt ggttgcttaa cctgaattcc cacgatctct
      481 atttggtttc atgacgatac gcgctaggat cgcgctggaa atagaagcag ggacaccatg
      541 actgacggtt tctcgccggc tggcaggccg atgccgcccc gatcggataa cgaaccccgg
      601 atcgagtggg atgtggcaac ggcagtatcc catgcctgta atattgcgac atcgaccgcg
      661 ggcaaggatg acgtcgtcat caatgttggc gtcgcatccg ctgcccatgg acgccagagt
      721 gaagtgtcgg cggacctgac aaagcgcttc gcactgccgc cgcggactgc gcgggcgctg
      781 cgcgacatgc tgcgggaagt aatcgcgaat atcgacgcgg accggcacca cagaccatga
      841 gcgagacccc cttcgcgccg ctcgcagccg catcccgccc cgactatctt gtggtggatg
      901 acttcctgcg cggatttgtc gaggcgcggg tgctgaagac agcgttcgag gtcgggttga
      961 tcgaccggct tctggagcac ggcaccggct cagtggcagc ccttgcgccg gtggtcgggc
     1021 tggatcaggc cgggttgcgg ttcctgctgg acctgctggc cgcggccggc gtcgtgcagg
     1081 aagccagggg cgacgtccgg ctgacgcggc ggtttcagga tgcgctgcgg tatcgcgact
     1141 tgttggaagt gaaactggat tatgccggct tcacgatcaa cgatttcgcc gatctgttca
     1201 cgcccctggt gcaaaccccg tcaggtttta ccagcaaggc gcgtttgttt gaactcttcg
     1261 actaccgccg cgccctggac cccaccttcg agaattatgc ccggacccgc atgtgggtcc
     1321 gcctgacatc gacgctgaca cggtatgagg cgccgccgtg cctggacgtc catgacatcg
     1381 gctcgcaccg ccggatgctg gatgtgggcg gcaacaatgg ggagttcgcg gtgcaggcgt
     1441 gccggcgtca tccgtcgctg cgggcgactg ttttcgacct gccgctgatc tgcgaactcg
     1501 ggctggacca tgtgc
//
LOCUS       DATAVD010000143         2097 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2060727, whole genome shotgun sequence.
ACCESSION   DATAVD010000143 DATAVD010000000
VERSION     DATAVD010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2060727"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(117..404)
                     /locus_tag="VHX39_02590"
     CDS             complement(117..404)
                     /locus_tag="VHX39_02590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990042.1"
                     /translation="MKLSTPWVDQTQDQFNVLAVRENHPAVETLNQTFGEHTFFLGED
                     GLHIVEEVNEIQRGSEAHEVLKIASWGDEGRTTLVPQEREPVGVVLLTDPH"
     gene            753..2021
                     /locus_tag="VHX39_02595"
     CDS             753..2021
                     /locus_tag="VHX39_02595"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: protein motif:HMM:NF001614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase/3-isopropylmalate dehydratase large
                     subunit family protein"
                     /protein_id="HEX3990043.1"
                     /translation="MPMTITEKILARAAGQAAVKPGDLAVVDVETAVLMDMTFLPEGW
                     REVLHVHDPSKVVIAFDHLVPAPTVYAATAHSTGRRFAAHFGIARLHDVGLDQGIAHA
                     VVADRGYAIPGTVLVNGDSHTCAAGAFNCAARGVGGPDMLYAVTMGKAWFRVGETIRY
                     DFSGTLRPGVSAKDIFLHIAGHYGAHVNQNVEYGGPGMGTLNMNGRRTLATMGAELSA
                     EFTIFEPDDILAAYMRQANPTAVTFPTMPDPGCVYRERRGIDLGSLEPLIAMPDAVVN
                     NSVPVNDVAGEHIDQAFVGSCANGTLDDLAVVAHVVNGRRVAKGTRLIVTPGTQTIYL
                     AALKAGYVETITAAGGIVTPATCGACVGGHLGAVGPNEVCLTASTRNFKGRMGDPSAR
                     IYMGSPATCAASALAGVITHPGEFFAGDRA"
BASE COUNT          397 a          680 c          618 g          402 t
ORIGIN      
        1 atcggatcgg cactacgctc cgactccggt atcgacaaag atccggtcac gcggcgttgc
       61 cggctcgttg accgacgaac gccacggccg ggaattaccg tatcagaacg tcaggttcag
      121 tgcgggtcgg tcagcagaac gacaccgacc ggttcgcgct cctgtgggac cagagtagtc
      181 cttccttcgt cgccccaact ggcgatctta aggacctcat gagcttcgga gccgcgctgg
      241 atctcattga cctcttcaac gatgtgaagc ccgtcctcgc cgagaaagaa agtgtgttcc
      301 ccgaatgtct gattaagcgt ttcgaccgcc gggtgattct cgcgaacagc caggacattg
      361 aactgatcct gcgtttggtc gacccatggt gttgacagtt tcatcaccca ctcctttttc
      421 gattgggttc tccggagtct taggcacgac ttccggcgcg agtgccgcgc atcatgactg
      481 acgggcctgg caatcccgcc cccgccacct tggggtgatc tgccgcaaga tcaacccccg
      541 cagcaaaatt tgattgatta aatccccgga gtatcaccgg gttcgcaaaa gttcccggtg
      601 cgccatgtga aatgtttgta agcctcgcct tcgccagttt atttctgttc aacaacaata
      661 tcgccacggg atcgccggcg gatttgccag gatgacttta cattgcgcca catccggtgc
      721 accgaacccc gaacgaccag gggagcccgc ccatgccaat gaccatcaca gaaaagatcc
      781 tcgcccgtgc ggccggccag gcggcggtga agccaggcga cctcgccgtg gtcgacgtcg
      841 aaaccgccgt cctgatggac atgaccttct tgcccgaagg ttggcgcgag gtgctgcacg
      901 tgcacgaccc ctccaaggtc gtcattgcgt tcgaccatct ggtccctgcc ccaaccgtct
      961 acgcagcgac cgcgcacagc actggccgcc gcttcgccgc gcacttcggc attgcccggc
     1021 tgcatgacgt cggcctggac cagggcatcg cccatgccgt ggtcgccgac cgaggctacg
     1081 ccatccccgg cactgtactg gtcaacggcg actcccacac ctgtgcggcc ggcgccttca
     1141 attgcgcggc ccggggcgtc ggtggccccg acatgctcta cgccgttacc atgggcaaag
     1201 cgtggttccg cgtcggcgaa acgatccgct acgatttttc cggaacgtta cggcccggcg
     1261 tctccgccaa agacattttc ctccatatcg ccggtcatta cggcgcgcac gtcaatcaga
     1321 atgtcgagta tggcggccca ggaatgggga cgttgaacat gaacgggcgg cggacattgg
     1381 cgacgatggg ggcggagctt tccgcggaat tcacgatatt cgaaccggac gacatcctgg
     1441 ccgcctatat gcgccaggcc aatccgaccg ccgttacgtt tccgaccatg cctgatcccg
     1501 gctgcgttta ccgtgaacgg cgcggcatcg atctgggctc actggaaccg ctgattgcga
     1561 tgccggatgc cgtggtcaac aactccgtgc cggtgaacga cgttgccggc gagcacatcg
     1621 atcaggcctt cgtcggctcc tgcgccaacg gcacattgga tgatctcgca gtggtggcgc
     1681 acgtcgtcaa cggcaggcgc gttgccaaag gcacaaggct gatcgttacg ccgggcacgc
     1741 agaccatcta cctcgccgca ctcaaggcgg gatacgtgga aacgatcacc gcggccggcg
     1801 gcatcgtgac cccggccacc tgtggcgcct gtgtcggggg ccatctcggc gcggtcggcc
     1861 cgaatgaggt ctgcctcacc gccagcacgc gtaatttcaa aggccggatg ggggatccat
     1921 cggcgcggat ttacatgggc tcgccggcca cctgtgcagc gtcggcattg gcaggtgtga
     1981 tcacccatcc aggagagttc ttcgcaggag acagagcatg agcggcggtt ccaatgccct
     2041 cggcggcaag gtctggaaat tcggcgacaa catcaacacc gatctgatgc tgcccgg
//
LOCUS       DATAVD010000144         6474 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2804458, whole genome shotgun sequence.
ACCESSION   DATAVD010000144 DATAVD010000000
VERSION     DATAVD010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6474
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2804458"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..398)
                     /gene="bamD"
                     /locus_tag="VHX39_02600"
     CDS             complement(<1..398)
                     /gene="bamD"
                     /locus_tag="VHX39_02600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEX3990044.1"
                     /translation="MRTLSLALCCAVLLLGGCGGSDKDKPTGPTPPVEVLYNNGLDAL
                     TASRFSDANDQFNSLEQNYPFSSWAVNAQIMQAYSQYVQNKYSDAIATLDRFIQLHPV
                     HRDIAYIYYLRALCYYEQIADIERDQKGTE"
     gene            complement(488..1432)
                     /gene="lpxC"
                     /locus_tag="VHX39_02605"
     CDS             complement(488..1432)
                     /gene="lpxC"
                     /locus_tag="VHX39_02605"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEX3990045.1"
                     /translation="MNGPTGHTVSETNASLWSQRTLKSRIPCVGTAVHTGHRVSVTLL
                     PAPAGHGIVFRRTDLGRDIPATYNRVVDTMLCTTIGEGSARISTIEHLMAALAGAGVD
                     NVLIEVDGPEIPIMDGSAAPFCFLLECAGIVSLETPRKVIEIRQPLRVTDGKAFAELR
                     PHDDPASDVAIPTLDLEISIDFAEPAIGRQTGSLRLTPRNFREAVAPARTFALARDID
                     HMRELGFAKGGSLDNAIVVDGSKVLNPGGLRMKNEFVAHKLVDAVGDLALAGAALHGR
                     FIADRPGHTLNNKLLRALFARKAAWADITREPAEAVAA"
     gene            1706..2869
                     /locus_tag="VHX39_02610"
     CDS             1706..2869
                     /locus_tag="VHX39_02610"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3990046.1"
                     /translation="MITQFDSSYAGHIDLENVGYLGTPVNSRRYSNDQLITAHTKAEA
                     QAKAMDRLGYGAFWMAEHHFQPEGTECLPNIILLAVHLAHLTKRLKFHTGFNITPMWH
                     PLRLAEDFAVADILTNGRVVFGVGRGYHTREVETFGAPLIDQAANRELFEEQVDIIFK
                     AFNNDSFSHKGKYYTLPPEVPYRGYTLKELTLVPRPKQLPVECWQPIQGGTTRALDFM
                     AKHGIQGVIGGGSAEGGATDRIMREWQAAHERIGMNLELGARMAVGFQFHIAASKEAG
                     MKEAAAYYEENMKMFGELRLVRALTDEQIEAMRDPRLAPNAKLPRIEDAVKAGGFLTG
                     TPDDIIEQLKALEKRYPGLSRVTVAQPLGLPLSLCLEQLEWFAKDVMPAFKTT"
     gene            3913..5208
                     /locus_tag="VHX39_02615"
     CDS             3913..5208
                     /locus_tag="VHX39_02615"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEX3990047.1"
                     /translation="METNGPTRHYPWMTSDTEATQYLERAAHAARLASRVLAGTSEER
                     RNTALRVMATALRDHRREILAANAADLASYNGTNAFRDRLTLNDARVEAMASGLDDVA
                     NLPDPLGRILKDWTPPNGLRIQQVATPIGVIGMIYESRPNVGADASALCLKSGNAVIL
                     RGGSDSANSARAINQALVHGLETAGLPPACIQVPPNADRAYVAAMLAGAGLLDLIIPR
                     GGKSLVERVQREARVPVLAHAEGLCHTYVHAAADPDMARAVVANAKMRRTGVCGATET
                     LLIDRTIAAAQLPPIVADLRALGCDFRADASARAIVPELTAANDIDFDTEWLDAIISV
                     SVVDGLDAALAHIARHGSSHTDAIITEDAAIAERFLAGVDSAVALWNASTQFCDGGEF
                     GFGAEIGIATGRIHARGPVGLEQLTIYRYVIRGNGQVRA"
     gene            5201..6046
                     /locus_tag="VHX39_02620"
     CDS             5201..6046
                     /locus_tag="VHX39_02620"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: protein motif:HMM:NF000843.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HEX3990048.1"
                     /translation="MPDKLPRFGDRRRMRVGLLGGSFNPAHEGHRHVAELALARLGLD
                     QVWLMVSPGNPLKPSVGMAPFADRLRGATAIGDGRRVIATSIEAAVDTRYSVDTLQEL
                     RRRFTRVHFVWIMGADLLTQLPRWRRWQAIVHDLPFVVLPRPGYTLPALAGQAARRLR
                     RWRRPAHEAAVLADARSGWLFLPTSQNATSASAIRDALKNTKEPYHSSNAQTAILTRP
                     PPAQTEEACRQTGSDRGSCLAGFAAQEGHCRRTGQGCGAVANPEGGAVTAGFDAKDDR
                     GQPGG"
     gene            5940..6341
                     /gene="rsfS"
                     /locus_tag="VHX39_02625"
     CDS             5940..6341
                     /gene="rsfS"
                     /locus_tag="VHX39_02625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEX3990049.1"
                     /translation="MAAGPGKAAARSPTPKAEPSRLDSMQKMIVASLEDDKAENVVTL
                     DLIGKAMFCDRMVIASGLADRQITAMAQHLREKLHAAGQKRVQIEGLGGSDWVLIDAG
                     DIVVHLFKPEARTMYGLEKMWGEDLDEAVAG"
BASE COUNT         1264 a         1997 c         2040 g         1173 t
ORIGIN      
        1 tgctcggtgc ccttttgatc gcgttcgata tcggcgatct gctcatagta acaaagcgcc
       61 cgcaggtagt agatataggc gatgtcgcga tgcaccggat gcagctggat gaagcgatcc
      121 agcgtcgcga tcgcgtcgga gtacttgttt tgtacatact gcgaatacgc ctgcatgatc
      181 tgcgcgttga ccgcccagga cgagaacgga taattttgct cgagtgagtt gaactgatca
      241 ttggcgtccg aaaagcgact ggcagtcagc gcatcgaggc cattgttgta tagcacttca
      301 accgggggcg tcgggccggt cggtttatcc ttgtcggacc cgccacagcc tcccaggaga
      361 agaacggcgc aacacaaggc aagcgaaagc gtgcgcacgg acgaggcgcg gtggcacgtt
      421 atgggactca tgcaagggct cattggcgcg cttatatcac gccgcagcgt ggcgcgaaga
      481 gccgctatca ggccgcgacg gcttcggccg gctcccgcgt gatatcggcc caggcggcct
      541 tgcgggcgaa caatgctcgc agcagcttgt tgttcagggt gtggcccggc cggtcggcga
      601 tgaagcggcc atgcagcgca gccccggcca gtgcaaggtc gcccacggcg tccaccagtt
      661 tgtgcgccac gaactcgttc ttcatacgca gcccgccggg gttgaggacc ttcgatccat
      721 ccacgacgat cgcgttgtcc aggctgccgc ccttggcgaa gccgagctcc cgcatatgat
      781 cgatgtcgcg ggcgagcgcg aaagtacggg caggtgccac tgcctcgcgg aaattccgcg
      841 gggtgagccg caagctgccc gtctggcgac cgatcgcggg ttcggcgaaa tcgatcgaga
      901 tttcgaggtc cagagtcgga atcgccacgt cagacgccgg gtcgtcgtgc ggccgcagtt
      961 cggcaaacgc cttaccgtcg gtgacccgca gaggctgacg gatttcgatc accttgcgag
     1021 gcgtttcgag ggagacaatg ccggcgcatt ccaacaggaa gcaaaatggt gcggccgagc
     1081 cgtccatgat cgggatttcc ggtccatcta cctcgatcaa cacattatcg accccggcgc
     1141 cggcgagcgc ggccatcagg tgctcgatcg tgctgatccg cgctgaccct tcaccaatgg
     1201 tggtgcagag catggtgtcc accacgcggt tataggtagc gggaatatcg cgaccgaggt
     1261 cggtacggcg aaatacgata ccgtgtcctg ccggtgcagg gagcaatgtg acgctgacgc
     1321 gatggccggt atgcaccgcg gtaccgacac aggggatacg cgatttcagg gtccgctgcg
     1381 accagagcga cgcgttggtc tccgaaacag tgtggcccgt cggtccattc atcggcttag
     1441 aatcccgtcc tgtttcgtct cgatccggca agctgacgcc ggacttcaaa ttcctgtcta
     1501 ggccaagacg cccgggcagg ccattcaagg attgttgcca actatttctg atcaattcct
     1561 tgattttcca cgttttgacg caacgcggca ctttcaaatc cgcaacttat cacgcattcg
     1621 atggcggcgg agttgccatc ccggtcaggc agattaacat gcgcgcgaca ggttcagcgg
     1681 ccgcggtcgc ccggagggaa acgccatgat cacacaattc gacagttctt acgccggtca
     1741 catcgatctg gaaaacgttg gctaccttgg cacgccggtg aattcccgtc gttacagcaa
     1801 cgaccagctc atcactgccc ataccaaggc cgaagcccag gcaaaggcga tggatcgcct
     1861 tggctatggt gcattctgga tggccgagca ccatttccag ccggaaggca ccgagtgcct
     1921 gcccaacatc attttgttgg cagtgcatct tgcccacctc acgaagcggc tgaagttcca
     1981 caccgggttc aacatcacac cgatgtggca cccgctgcgt ctggccgagg attttgccgt
     2041 cgccgatatc ctgaccaatg gccgggtcgt gtttggtgtc ggtcgcggct accacacgcg
     2101 tgaggtggaa acgttcggcg cgccgttgat cgatcaggca gcgaaccggg aattgttcga
     2161 ggaacaggtc gacatcatct tcaaggcctt caacaacgat tccttttcgc acaagggcaa
     2221 gtactacacg ctgccgcccg aggttccgta ccgcggctat acgttgaaag agctcactct
     2281 ggtgccccgg ccgaagcagt tgccggtgga atgctggcag ccgatccagg gcggcaccac
     2341 gcgcgccctg gatttcatgg caaaacacgg cattcagggc gtgattggcg gcggctcggc
     2401 cgagggcgga gccacagaca gaataatgcg cgaatggcag gccgcgcatg aacggatcgg
     2461 catgaacctg gaacttggcg cgcggatggc cgtcggcttc cagttccaca ttgcggcgag
     2521 caaagaggcc ggcatgaagg aagcggcagc atattacgaa gagaatatga aaatgttcgg
     2581 cgagttacgg ttggtgcgag ccctgaccga cgaacaaatt gaggcgatgc gcgatccgcg
     2641 cctggccccc aacgcgaagc tgccgcgaat cgaggatgcg gtgaaggcgg gtggattcct
     2701 gaccggaaca cctgacgata tcattgagca actgaaagct ctcgaaaagc gctaccccgg
     2761 tctaagccgc gtcactgtcg cccaacccct gggcttgccg ctgtcgcttt gcctggagca
     2821 actggaatgg ttcgcgaagg acgtcatgcc ggcgttcaaa acaacatgat tggcgcctgg
     2881 cgctgagcgc accaacccga gaatgccgtt acctggggct ggagttccat ccgtgccagc
     2941 gcaatggaac ctcaggccca gagcatgacg gtatgccggg actctgacac atgcctcgcc
     3001 cggttttcga ccggcccggt ttcgaagtaa cgcgcagcga tcttccgagc gctcagatgc
     3061 tactgctatg ccagtctcgc tgatggaccg aatcgctcct ggcgtggtct cagttagggc
     3121 aggcgcctgg cgcagacctg acgagaccag cctcaacacg acgaaatgag cgaacccgca
     3181 cgcgatggat cctgcgccac cacgcaggca acaatttatc agacaggtga cgcagaggat
     3241 gagtcttgac ggatgcgaag ccaggattat cagcgcatga aaatcgaatt cggagagggc
     3301 gccggtttgt gaagacaacg cattggcaac tcaccatcgc cctggcgtgt ttggtggccc
     3361 tggctgactg cgcgcagccg ccggctgttg tccggaacgt atccggggac ggtgaatacg
     3421 ccggaactgc gacgcggcct cagtatcccc agcgccgtga ttgtccgcac tcccgtccat
     3481 ttcacctgac cgttcaagcc ggcgtgacgt actttctatg gggttatcag tacattccca
     3541 cacaggtact gagtaacggt actgtgacgg ggacactccc cggtgtacag ctgaccggaa
     3601 cccatgacga ctcatccatg caaggggaca tcacggatgg ccagtgctgg ctgcatttca
     3661 ccctgaagcg acgcgagttc tgagccaaag gttgcagcgg ccgagcgggc cggaaacaac
     3721 gcagataccc acagagatgc acagccagcc tctgatcgca gcctgggccc agtgcgactt
     3781 ccggccacat ttttcctgac gtcaatccgg ccgccttccg gccagctatc gtccttgccc
     3841 gagctttcgg ataattcgcg ttaaaccaag ccggatcgcc acaccggcgg cgagaccggt
     3901 caacagtccc ctctggaaac gaacggcccg acgcgccact atccgtggat gacgagcgac
     3961 acagaggcaa cccagtatct tgagcgcgcg gcccatgcgg cacgcctggc gtctcgcgtg
     4021 ctggcaggca ccagcgagga gcggcgcaac accgccctgc gcgtcatggc gacggcactg
     4081 cgtgatcatc ggcgggagat cctggcggcc aatgcagcgg accttgccag ctacaacggc
     4141 accaatgcgt tccgcgatcg tctgactctg aacgatgccc gggtcgaagc aatggctagt
     4201 ggcctcgacg acgtagccaa cctccccgat ccactgggcc gcatcctcaa ggactggacc
     4261 ccgcccaatg ggctacgcat ccaacaggtt gcgacgccca tcggcgtgat cggcatgata
     4321 tatgaaagcc ggccgaacgt aggggcagac gcctcggcgc tttgcctcaa gtcaggcaac
     4381 gcggtgatcc tgcggggcgg ctcggatagt gccaactcgg cgcgagcgat caatcaggcg
     4441 ttggtgcacg gtttggagac agcaggcctg ccgccggcgt gcattcaggt gccacccaat
     4501 gcggaccggg cctatgtggc ggcgatgctg gctggcgctg gcttgctcga cctgatcatc
     4561 ccgcgcggcg gcaagtcgct cgtcgagcgc gtgcagcgtg aggcgcgggt gccggtactg
     4621 gcccatgccg agggcctctg ccacacttac gtccatgccg ccgccgatcc cgatatggcc
     4681 cgcgctgtcg ttgccaacgc caagatgcgc cgtaccggcg tttgcggcgc caccgagacc
     4741 ctgctgatcg accgcaccat tgccgcggcg caactgcccc cgatcgttgc cgatctgcgg
     4801 gcgcttggct gcgacttccg ggctgacgcc tcggcgcgcg cgatcgtgcc ggagctgacc
     4861 gccgcaaacg acattgattt cgacaccgaa tggttggatg cgatcatttc ggtcagcgtg
     4921 gtcgatgggc tcgacgcggc cctggcacat atcgcgcgcc acggcagctc ccacactgac
     4981 gccatcatca ccgaggacgc ggccatcgcc gaacgcttcc tcgccggcgt cgacagtgcc
     5041 gtggcgctct ggaacgcctc aacccagttt tgcgatggcg gggaatttgg gttcggcgct
     5101 gaaatcggca tcgcaacggg ccgcatccat gcgcgcggcc cagtcggatt ggagcagctg
     5161 acgatctatc ggtacgtgat tcgcgggaat ggccaggtgc gtgcctgaca agctgccacg
     5221 atttggcgac cgccggcgga tgcgcgtggg acttctgggc ggctcgttca acccggcgca
     5281 cgagggccat cgccacgtcg cggaactggc cttggcgcgg ctcgggctgg atcaggtttg
     5341 gctcatggtg tcaccgggca atccgctcaa gccgtccgta ggcatggcgc cgttcgcgga
     5401 tcgcctgagg ggcgctacgg ccatcggcga tgggcgccgc gtgattgcca cgtcgatcga
     5461 ggccgcggtc gacacccgat attccgtcga cacattacag gaactgcggc ggcgctttac
     5521 gcgggttcat ttcgtctgga tcatgggcgc cgacctgctg acccaattgc caaggtggcg
     5581 ccgctggcag gcaatcgtgc acgacctgcc gttcgtcgtg ttgccgcggc ccggctacac
     5641 actgcccgcg ttggccggcc aggcagcgcg ccgcttgcgc agatggcgtc gtccggcgca
     5701 tgaagcggca gttctggcgg acgctcggtc cgggtggcta tttctgccga cgtcacaaaa
     5761 tgccacctcc gcctcggcga tccgtgatgc cctgaagaat acgaaggagc cgtatcatag
     5821 cagcaacgcc caaaccgcca tcctcacccg cccgccacca gcccagaccg aggaagcgtg
     5881 ccgtcaaacc ggttctgatc gaggttcctg cctcgccggg ttcgccgcgc aagaaggcca
     5941 ttgccgccgg accgggcaag gctgcggcgc ggtcgccaac cccgaaggcg gagccgtcac
     6001 ggctggattc gatgcaaaag atgatcgtgg ccagcctgga ggatgacaaa gcggaaaacg
     6061 tggtcacgct ggatttgatc ggaaaggcaa tgttttgcga ccggatggtg atcgcctccg
     6121 ggctggcgga ccggcaaatc actgcgatgg ctcagcactt gcgggaaaag ctgcatgcgg
     6181 ccggtcagaa gcgtgtgcag atcgagggtc tgggcggctc cgactgggtg ctgatcgatg
     6241 ccggggacat cgtcgtacat ttgttcaagc cggaagcgcg gacaatgtac ggattggaaa
     6301 agatgtgggg cgaggatctg gacgaggcgg tggccgggta gtcacacgat cggccatcgg
     6361 caaagctatc gcgccatttg ttcatgcctt cgggcgaggc gataaagccg gccagcgtca
     6421 gttcacgcct gacgcgctgc aatcgagcag gtggcagcgg accaacccgc cttc
//
LOCUS       DATAVD010000145         3311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1316038, whole genome shotgun sequence.
ACCESSION   DATAVD010000145 DATAVD010000000
VERSION     DATAVD010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3311
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1316038"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..922)
                     /locus_tag="VHX39_02630"
     CDS             complement(<1..922)
                     /locus_tag="VHX39_02630"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990050.1"
                     /translation="MNVIDVHGDNTPEVRHTERSTMAKVMRRIIPFLILCYFVSYLDR
                     INVGMAAIAMDKSIGLSPIAYGAGASIYFLGYFLFEVPSNLMMQKLGARVWIARIMIS
                     WGLVSGATAFVIGPHSFLVVRFLLGAAEAGFFPGLVLYLSWWFPAAYRARITGMFMAA
                     MPIAGIISAPLSGLLLGLNGGLGLQGWQWLFIVEAAPAIMLGFVVLRYLTDRPKDAAW
                     LPPPEREWLGARMEDERRAGEKKDFLSIGRAFAKPQIWALSAICFGANIANYGLTLWL
                     PQIVKAFGVSNLETGFITAIPSIFASASMIL"
     gene            complement(1067..2008)
                     /locus_tag="VHX39_02635"
     CDS             complement(1067..2008)
                     /locus_tag="VHX39_02635"
                     /inference="COORDINATES: protein motif:HMM:NF025694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate cyclase domain-containing protein"
                     /protein_id="HEX3990051.1"
                     /translation="MRMNDGTTSLVMEQIEDVIGRNVGRDIGRMVAFARGGVERAAGS
                     ITAASKPHVGIVTGFFIRHAEPPSPETDGLGGAAHLAAGLLNAGIPTTLISDAPCAKA
                     VWAMSTAVPGAVDLEIVSTRRDAVYQLRNRLSQAAQPITHLIAIERVAPGVDGKPHRE
                     HGWDMTAETAPLDLLFDDEGWTSPWTTIGIGDGGNEIGMGGLPPEIVANDIPNGGLIA
                     AKTRTDHLIVAGVSNWGAYGLLAAMAALCPERAADLLQYFTPEMDRQFLEAAVLIGQA
                     VDDSRPDRPGKPQLSVDRLSVEQHAEVINALRSIVVK"
     gene            complement(2061..3164)
                     /locus_tag="VHX39_02640"
     CDS             complement(2061..3164)
                     /locus_tag="VHX39_02640"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEX3990052.1"
                     /translation="MMQVSDSAPAGEPSGLEVSVPLDTPTPAFLVVEEVVRRNLAATI
                     AASGSAARFLPHLKTHRAPWLTEWLVAGGVTGCKVATPAEAELALAAGMRMVLWAYPT
                     VNPANIARFIANARRYPDAQLVGLVDSAAGVEAWLAALQHNRPMNLAFRVDLDPGMGR
                     TGVPIGSVALDLARRLHHEGCFVGWHVYDGNIKDLDRNVRQRQVDALVEAINDLRRQL
                     KAEGIPSDVVAGTSYTFEFWPEDAAAYVSSGSWTYSSDQHDRELRSVGWAPSAFVLAT
                     VISTRNGTATLDAGAKAIAPDKPVAERFRWDGRILLMNEEHTVVESQTLAVGDRVLLM
                     PRHACTTAYLYDEALVLTVDGKWEWRSQLASRR"
BASE COUNT          741 a         1000 c          936 g          634 t
ORIGIN      
        1 aaagaatcat actggcagat gcgaagatag acggaatcgc cgtaatgaac ccggtttcca
       61 gattgctgac accgaacgct ttgacgatct gcggcagcca cagggtcagg ccataattgg
      121 cgatattggc gccgaagcaa atagcgctga gcgcccatat ttgtggtttg gcgaaggccc
      181 gcccgatcga aaggaagtct tttttctccc cagcgcgccg ctcgtcttcc atccgggcgc
      241 caagccactc ccgctccggg ggaggcagcc acgccgcatc tttgggacga tcggttaggt
      301 agcgaagcac gacgaaaccg agcatgatgg ccggggccgc ctcaacgatg aacagccatt
      361 gccagccctg cagcccgagc ccaccattga gaccgaggag caatccggac aacggcgcgc
      421 taatgatccc cgcgatcggc atcgccgcca tgaacatgcc ggtgatgcgc gcgcgatagg
      481 cggcaggaaa ccaccaggac agatacaaaa ccaggccggg gaaaaatccg gcttcggcgg
      541 cgccaagaag aaaccgcaca accagaaacg agtgcggacc aatgacgaac gccgtggcgc
      601 ctgaaaccaa accccaactt atcatgatac gcgcgatcca cacgcgcgca ccaagctttt
      661 gcatcatcag attgctcgga acctcgaaca ggaagtaacc gagaaagtag atgctggcgc
      721 ccgccccgta agcgataggc gaaagaccga tgctcttgtc catcgcgatc gccgccatgc
      781 cgacattgat gcggtctaga tacgaaacaa agtagcagag aatcaaaaag ggaatgatcc
      841 gacgcatgac cttggccatg gtcgatcgct cagtatgtct cacttctgga gtattgtctc
      901 catgtacatc gatcacgttc acacgtctct cctacagaac caaaggttag gattgagaaa
      961 atcatttttt aaagtttgtt ttttttggcg cgtgccgtgt actggataga aggcttagga
     1021 attagggaag atttttaaaa aacggcagag ttatttaaaa aagaagttac ttgaccacga
     1081 ttgacctcaa tgcattgatc acctcggcat gctgttcgac cgacaggcgg tccacgctga
     1141 gctgaggctt gccagggcga tcaggccggc tgtcgtccac tgcctgccca atcagaacgg
     1201 cagcttcaag aaactggcgg tccatctctg gcgtgaaata ctgaagcaga tcagcggcac
     1261 gttccgggca aagtgctgcc attgcggcca gcaatccata ggcaccccag ttcgaaacgc
     1321 ctgcgacgat gaggtgatcg gtacgcgttt tcgccgcgat caatcctcca ttcggaatat
     1381 cgttggcgac gatctctggc ggcaacccgc ccatgccgat ttcgttacct ccatcgccga
     1441 tcccgatggt cgtccacgga gaggtccacc cttcgtcgtc aaagagcaga tcaagggggg
     1501 cggtttcggc cgtcatgtcc catccgtgct ctctatgggg cttaccatcg acgcccggtg
     1561 ccacacgttc aatggcaatg agatgagtaa ttggctgcgc cgcctgagag agcctattcc
     1621 gcagctgata tacggcatct ctcctcgtgg acacgatctc cagatcaacc gcaccaggta
     1681 ccgctgtact cattgcccag accgctttag cacagggcgc gtccgaaatc agggttgtcg
     1741 gaataccagc attcaatagt ccagctgcta aatgtgcagc acccccaagg ccatcggttt
     1801 ccggagatgg cggttcagcg tggcgaataa agaatcccgt gacgatgccg acatgcggtt
     1861 tggacgcggc ggttatcgac cccgcggcgc gctcgacgcc gcctctggca aaggccacca
     1921 tgcggccgat atcccggcca acatttcgcc cgataacatc ttcgatttgc tccataacaa
     1981 gcgaggtcgt accgtcgttc attcgcattt ttctactcct cgttgcttgc cgtttcggac
     2041 gcagcttgcg ccgtcggacg ttaccttctg ctggcaagtt gggaacgcca ttcccacttg
     2101 ccgtcgaccg tcaaaaccag cgcctcgtcg tagaggtagg ccgtcgtgca agcgtgccgg
     2161 ggcatcagaa gcacccggtc tcccactgca agcgtttggg attcgacgac ggtatgttcc
     2221 tcattcatca ggaggatcct gccatcccaa cgaaatcgct cggcaactgg cttgtcgggc
     2281 gcgatggcct tggcgccagc atcaagggtc gccgtgccat ttcgggtgga aatcaccgtc
     2341 gcgaggacga acgcgcttgg cgcccagcca acggagcgga gttcacgatc gtgctggtcg
     2401 ctggaatagg tccaactgcc cgacgaaaca taggccgcgg catcctcggg ccagaactca
     2461 aacgtgtagc tggtacccgc gacaacatcg gaggggattc cttcggcttt cagctggcgc
     2521 cgcaaatcgt tgatggcctc gacaagggcg tcgacctgcc gttgccggac gttacgatcg
     2581 aggtccttga tgttgccgtc gtagacgtgc cagccaacga aacagccttc gtgatgcagg
     2641 cggcgagcga gatccagggc cacgcttccg atcggcacgc ccgttcgccc catgccggga
     2701 tcgagatcga cacgaaaagc cagattcatc ggccggttgt gctgcaacgc cgccagccaa
     2761 gcctctactc ccgccgcgga atcaacgagc cccacaagct gggcatcagg atatcgacgt
     2821 gcattggcga tgaagcgcgc tatattggcg gggttgacgg tcggataggc ccacaggacc
     2881 atccgcatcc cggcggcgag cgcaagttca gcttccgcag gcgtggcgac cttgcagcct
     2941 gtcacacctc cggcgaccag ccattccgtg agccagggcg cccggtgggt tttcaaatgc
     3001 ggcaaaaacc gcgccgcaga cccactcgcc gcgatcgttg ccgcaaggtt gcggcgaaca
     3061 acctcctcta caaccagaaa ggccggggtc ggtgtatcaa gcggcaccga gacttcgagt
     3121 ccggagggtt cgcctgcggg cgcgctgtcg gacacctgca tcatgcctca cgctccgtag
     3181 gtgatgtcgc ggtgccaacg aaggcgatga cgtcgatttc gaccagcaca ccgttcagca
     3241 cactccccac cgtcgttctg acgggcggat tatcagggaa atatctggca taagtggtgt
     3301 cgaaacgcgg c
//
LOCUS       DATAVD010000146         3367 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2246367, whole genome shotgun sequence.
ACCESSION   DATAVD010000146 DATAVD010000000
VERSION     DATAVD010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3367
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2246367"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1862
                     /locus_tag="VHX39_02645"
     CDS             <1..1862
                     /locus_tag="VHX39_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HEX3990053.1"
                     /translation="LRLGEVWSGDAVLLRAERSQAEADPPFTLRWLVSIVLKQGKHLR
                     DLLIASVAISFLTIFPPLLVMQVVDRVLTHHSYSTLVLISLILATAVFYETMLGYARR
                     LIILVVGVRVDAQLNLQVFNRMIRLPLDYFERHPAGETMYRVGQVNQVRTFITGKLMT
                     TILDMITLLVLLPFLFWLNATLAWIVLVCGTAIMLIILAYLRPIRLIFAKVITAETLK
                     NAALGETIFGIKTVKSLALEPQRKALWDEKVAEVGKWRYQMGKLSNWPQTLVTPIERF
                     MWMGVILIGAYLALSDDSGYQVGSMFAFMMLSQRVSQPLVGLARLIEEWEEVAGSMAQ
                     AGEVLNRPLEVDAASGGLRPRFAGAVTFDDVTFTYAGTKLPALDRLNFSVPAGTMLGL
                     VGRSGSGKSTVTRLLQGINREYSGFIKIDGADLREINLRHLRSSFGVVLQENFLFRGS
                     IRENILAGRPGLTLDDAIRAARLAGAEEFIERMPNGYETWIEEGSPNLSGGQRQRLAI
                     ARALITDPRILILDEATSALDPESEALVNANLLRIARGRTMVIVSHRLSSLVNCDQIM
                     VLERGKVMDVAPHTVLLERCAIYRTLWNQQNRHMQQHQGSGHAAPAPTLLQGD"
     gene            1825..3234
                     /locus_tag="VHX39_02650"
     CDS             1825..3234
                     /locus_tag="VHX39_02650"
                     /inference="COORDINATES: protein motif:HMM:TIGR01843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HEX3990054.1"
                     /translation="MQLLPRPSSKAISTTRSDRLDPTLPAILEYQSPSSAIINLPMPR
                     LARGFAWTFSSMLGVMLLITGFISVDRVVTAQGLVVARSPTIVVQPLEASILKSIEVH
                     PGDVVHAGEILARLDPTFAQADLGTLVAQVSTLQAQVARMQSEVHDKPFSYDGNDPNM
                     ALQAAIYGQRHAEYNFKLENYQQKIASLASAFAKANSDIATNTDRLAYAKSLEAMRLQ
                     LEQLNVGSKLNTLSAKDSRAEMAGNLADAQHAARGAQRDLAAEIAERNGYIQGWHSDI
                     ADKLTDALGKLSDARESLNKAQLRRQLVVLRAERDGTVMSVGKVAVGSVLSAGQQLIT
                     LVPTDAPLEVEANVAGTDDGYIHVGDPVDIKFDTFPYSRYGLAHGVVRIISPNSFSAQ
                     DEERNPTGAVPVAQQQSGVWYRARITLDQIQLHGTPAGFHLVPGMPIVADVRVGKQTV
                     LRYMLGRTIPLVTEGMREP"
BASE COUNT          601 a         1188 c          983 g          595 t
ORIGIN      
        1 aactccgcct cggtgaggtc tggagcgggg acgccgtgct gctgcgcgcc gaacgctccc
       61 aggccgaggc cgatccgccg ttcaccctgc gctggctggt cagcattgtg ctgaagcagg
      121 gaaaacacct ccgcgacctg ctgatcgcct ccgtcgccat cagcttcctc accatttttc
      181 cgccgctcct ggtcatgcag gtggtggatc gcgtgctgac tcaccacagc tattcgacct
      241 tggtcctgat atccctgatc ctggcaacag ccgtcttcta tgaaaccatg ctcggctatg
      301 cccgccggct gatcatcctc gtggtcggcg tcagggtcga cgcgcaactg aacctgcagg
      361 tcttcaaccg catgatccgc ctgccgctcg actatttcga gcggcatccg gccggtgaga
      421 cgatgtaccg cgtcggccag gtcaaccagg tccgcacgtt catcaccggc aagctgatga
      481 ccacgatcct ggatatgatc accctgctgg tgctgctgcc gttcctgttc tggctgaatg
      541 ctaccctggc ctggatcgtg ctggtctgcg gcaccgcgat catgctgatc atcctggcct
      601 atctgcggcc gatccgactg attttcgcca aggtgatcac cgcggaaacc ctgaagaatg
      661 ccgccctcgg cgaaaccatc ttcggcatca agacggtcaa gtcgctcgcc ctcgaacccc
      721 agcgcaaggc gctgtgggat gaaaaagtcg ccgaggtcgg caagtggcgc taccagatgg
      781 gcaagctgtc gaactggccg caaacgctgg tgaccccgat cgagcgcttc atgtggatgg
      841 gggtgatcct gatcggcgcc tatctcgcgc tgtccgacga cagcggctac caggtcggca
      901 gcatgttcgc cttcatgatg ctgtcacagc gcgtcagcca gccgctggtc ggcttggccc
      961 gtctgatcga ggaatgggaa gaggtcgccg gctccatggc ccaggcaggc gaggtcctca
     1021 accgaccgct ggaagtggat gcggcatccg gcggcctgcg gccccggttc gccggcgccg
     1081 tcaccttcga tgacgtcacc ttcacctatg ccggcaccaa gctgccggcg ctcgatcgcc
     1141 tcaacttctc cgtccccgca ggcaccatgc tggggctcgt cggccggtcc ggttcaggaa
     1201 aatccaccgt cacccgcctg ttgcaaggca tcaaccgcga atattcgggc ttcatcaaga
     1261 tcgacggcgc cgacttgcgg gaaatcaacc tccgccatct gcggtccagc ttcggcgtcg
     1321 tgctgcagga aaacttcctg ttccgtggct cgatccggga gaacattctg gccggccgcc
     1381 ccggactcac cctggacgac gcgatccgtg ccgcgcgcct cgccggcgcc gaggaattca
     1441 tcgagcgcat gcccaacggc tacgaaacct ggatcgagga aggctcgccc aacctgtcgg
     1501 gcggccaacg ccagcgcctc gccattgccc gcgcgctgat caccgacccc cgcatcctga
     1561 tcctggacga agcaaccagc gcgctcgacc ccgaatcgga agccctggtg aacgccaatc
     1621 tgctgcgcat cgcacgcggc cggaccatgg tcatcgtctc ccatcgcctg tcgtcgctgg
     1681 tcaactgcga tcagatcatg gtgctggaac gcggcaaggt catggacgtc gccccgcaca
     1741 ccgtgctgct ggaacgctgt gccatctatc gcaccctctg gaaccagcag aaccgccaca
     1801 tgcagcaaca ccaaggatcc ggccatgcag ctcctgcccc gaccctcctc caaggcgatt
     1861 agtacgacgc ggagcgaccg gctggacccc actctgccgg ccatccttga gtaccagtcg
     1921 ccgtcgtccg ccatcatcaa cctgccgatg ccgcgcctgg cgcgtggttt cgcctggacc
     1981 ttcagcagca tgctcggtgt gatgctgctg atcaccggct tcatcagcgt cgaccgggtg
     2041 gtgaccgccc agggcctcgt cgtcgcccgc tcgcccacca tcgtcgtcca gccgctggaa
     2101 gcgtccatcc tgaagtcgat cgaggttcat ccgggtgacg tcgttcacgc cggcgaaatc
     2161 ctggcccgtc tcgatccgac attcgcccag gccgacctcg gcaccctcgt cgcccaggtg
     2221 tccacgctgc aggctcaggt cgcccgcatg cagtccgagg tgcacgacaa gccgttcagc
     2281 tacgacggca atgatccgaa catggcgttg caggccgcca tctacggcca gcgtcatgcc
     2341 gagtacaact tcaagctgga aaactaccag cagaaaatcg ccagcctggc gtccgccttc
     2401 gccaaggcca actccgacat cgccaccaat accgatcgcc tcgcttacgc gaaatccctg
     2461 gaggcgatgc gccttcagtt ggagcagctt aatgtcggct ctaagctcaa taccctgtcg
     2521 gcaaaggatt ccagggccga aatggcgggc aaccttgccg acgcgcagca cgcggcacgc
     2581 ggcgcccagc gcgacctcgc cgcggaaatc gcagagcgga acggctatat ccagggctgg
     2641 cactcggata tcgccgacaa gctgaccgac gcgctcggca aactgtccga tgcgcgggaa
     2701 tcgctcaaca aggcccagtt gcgccgccag ttggtcgtat tgcgcgccga acgcgacggc
     2761 accgtcatgt ccgtcggcaa ggtggcggtc ggatccgtgc tgagcgccgg ccagcaactg
     2821 atcaccctgg tcccgaccga cgccccgctg gaggtggagg ccaatgtcgc cggcaccgac
     2881 gacggctata tccatgtcgg cgatccggtc gacatcaagt tcgacacctt cccctacagc
     2941 cggtacggct tggcccatgg cgtcgtccgc atcatcagcc ccaacagctt ctccgcccag
     3001 gacgaggaac ggaacccgac cggtgccgtg ccggtggcac aacaacaaag tggtgtctgg
     3061 taccgcgcgc ggatcaccct ggaccagatc cagttgcatg gcacgccagc cggcttccat
     3121 ctggtgcctg gcatgccgat cgtggccgat gtccgtgtcg gcaagcagac cgtgctgcgc
     3181 tacatgcttg gcaggaccat acccctggta accgagggca tgcgggagcc ttaggccccg
     3241 ccccccgaac ggacgcaacg ccccatggct ctcctcgact ctctgatgtc tggcgtctcc
     3301 ccctccgccg ccctacggcg ggggctccgg cagttcgaac agggcgacgt caagggggcg
     3361 ttcgtcc
//
LOCUS       DATAVD010000147         4584 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_386198, whole genome shotgun sequence.
ACCESSION   DATAVD010000147 DATAVD010000000
VERSION     DATAVD010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4584
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_386198"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(298..1191)
                     /locus_tag="VHX39_02655"
     CDS             complement(298..1191)
                     /locus_tag="VHX39_02655"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3990055.1"
                     /translation="MALSIRPLDAVSRPFFGGEVSGIDITRKLTGAEAAAIEKGMDQY
                     GVLVFHGQHFDDETQLAFSRNFGGLEEASGDLNWGKARRIESALVNDISNLDNDNQVL
                     ARDSRRRLFSLGNRLWHSDSSFKEVPAKYSLLSARHIPSAGGNTEFADMRAGYDSLDD
                     ETKAEIENLVCEHSQMYSRALLGFDDFSEEDRVRFKPVLQRLVRRHPSTGRKSLYLAS
                     HAGAIVGWPVPEARALLRDLIEHATQRKFVYAHEWAQWDLVMWDNRATMHRARPFDPK
                     EVRDMHRTTVGCERSTMAEAA"
     gene            complement(1209..2822)
                     /locus_tag="VHX39_02660"
     CDS             complement(1209..2822)
                     /locus_tag="VHX39_02660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990056.1"
                     /translation="MDTNIASDAKGDSAVRGLYDRLEDRCLMRDQKGASDVYYELVRA
                     GRPLPEIVAQGVRIHAPFTHVPYHERIDDGYPNFVNNDHCLLSARATVNLNRMLPSHL
                     AMLPMAQTIWYIPTGLDIWNQKIDKAPGHYTRHRGNVQVEEAPPAPVVYWPDQQPIAQ
                     AGPLKERLNNWMTLVHRGQVIEAYRVFLGLMENTAERKDVLAEMVFAGLMDVQDRTLH
                     NRSYTTGHKAYRARATVEIGNAIGWDNAHDVVYAGALDIAVGPRWYSTYEVACNYIKM
                     MIEGETLRAVPYGGVSEAELAILRNNQPVNQQDAAELTDAVLRQGEVETLETVTKLLK
                     SGKDPRRILDVLQLAVGQIVLETRDPNAFNMPHHCYEYHNTLAWFFDNFDHPRRLRLL
                     YVAAMFANRVAHNQQGLGEVHPAPSQGPAGAGSLSADQLLDRVDTAICALNGDEAVGW
                     TRAYCENVGERDKLVQRIAVAACKMGNDPHNQEIAQCMLMDFGTNRQPDRDKLLLVAA
                     YHTAMHRKYGDPSEPSRRFGQAMGLAELH"
     gene            2922..3908
                     /locus_tag="VHX39_02665"
     CDS             2922..3908
                     /locus_tag="VHX39_02665"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990057.1"
                     /translation="MISSAWTVSILAGTGEQGYSGDGSTAANARLNNPFDLTFLPDGD
                     LVFSDTFNHCIRRVATATGIITTICGSGRKGFSGDGGPASHAELNEPYGVVADRSGRV
                     FFADRLNRRVRVIDTTGTISTLAGNDTGTYSGDGGPAAQAGLVEPNGLALSPDQTQLF
                     IADVAGHRVRVVDLTTNTIQTAAGTGDARHDGDSGPANQAAVFGARAVAFAPDGSLYV
                     MERQGSCIRRIRDGIIETVAGTGARGYAGDGGDAHLAVFDAPKEMAVDPDGNIFVVDT
                     ESHAIRLIDAKTWIVTTIASGLARPHGALVAPDGSLLVGDSEHHQVIRLTHG"
     gene            complement(4011..4280)
                     /locus_tag="VHX39_02670"
     CDS             complement(4011..4280)
                     /locus_tag="VHX39_02670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HEX3990058.1"
                     /translation="MANTRKLTAEEQAALEVVAAMPEDEIDTSDMPEVTDWSGAVRGG
                     LYRPVKHLTSLRLDSDLLEWFKRGGEGYQTRINAALREYVERHQT"
     gene            complement(4267..4446)
                     /locus_tag="VHX39_02675"
     CDS             complement(4267..4446)
                     /locus_tag="VHX39_02675"
                     /inference="COORDINATES: protein motif:HMM:NF016268.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HEX3990059.1"
                     /translation="MSRHDPHPDGDRWDTICEAHGVLLFIAHTWPDGDSAPGRIISAR
                     KATRKERKAYEDGEH"
BASE COUNT          865 a         1528 c         1314 g          877 t
ORIGIN      
        1 ttctcaacca cggcccaagc gcgcatgtct gtctcctgct ttctggcgtt cgaccgatgg
       61 atagcgcgtg caggagatta agcaagaccg ggctctgccc ggacccgcgt catgcgaagc
      121 gtgcatgcgc acgacgggcc ggcggcccta tgatcccgtt actttaggcg ggttggggga
      181 gaggggcgac cgaggcgttt gcaaccgctg tgtcgtccct ctcccccaac ccgcctaatt
      241 attggttcca aggggcgtcg ccccttggcg gggttcgggg cagcgccccg atcttcctta
      301 agccgcctcc gccatagtcg aacgttcgca cccaacggtg gtgcgatgca tatcccgcac
      361 ttccttcgga tcgaacggcc gcgcccggtg catcgtggcg cgattgtccc acatcaccag
      421 gtcccattgc gcccactcat gcgcgtagac gaacttcctt tgcgtggcgt gctcgatcag
      481 atcgcgcaac aacgcgcgcg cctccggaac cggccagccg acgatggcgc cggcgtggga
      541 cgcgagatac agcgacttgc gcccggttga cggatgccgc cgcaccagcc gttgcaacac
      601 cggcttgaac cgcacccgat cctcctcgga gaaatcatcg aaccccagca gcgcgcgcga
      661 gtacatctgg ctgtgctcgc acaccaggtt ctcgatctcg gccttcgttt catcatccag
      721 cgaatcataa cctgcccgca tgtcggcgaa ctccgtattg ccgccggccg aggggatatg
      781 ccgagccgac aacagcgagt atttcgccgg cacctccttg aatgaactgt cggagtgcca
      841 cagccggtta cccaggctga acaaccgccg ccggctgtcc cgcgccagca cctgattgtc
      901 gttatccaga ttggagatat cgttcaccag cgccgactcg atccgccgag ccttgcccca
      961 gttcagatca ccactggctt cctccagccc gccgaagttg cgcgagaacg caagttgcgt
     1021 ttcgtcatcg aaatgctgtc cgtggaagac cagcacgcca tactggtcca tgcccttctc
     1081 gatcgcggcg gcttccgcac cggtcagttt gcgggtgata tcgatgcccg agacctcacc
     1141 gccaaagaac ggccgggaaa cagcatcgag cggacggatc gaaagtgcca tgatatgagc
     1201 ccctgccttc agtgcagttc cgccaggccc atggcctgac caaaacggcg ggaaggctct
     1261 gacggatcgc cgtatttacg gtgcatggcg gtatgatacg ccgcgaccag cagcagcttg
     1321 tcacgatccg gctgccggtt ggttccgaaa tccatcagca tgcactgggc aatttcctgg
     1381 ttgtgcggat cgttgcccat cttgcacgcc gccacggcga tccgctgcac cagcttgtcc
     1441 cgctccccca cgttctcgca atacgctcgg gtccaaccaa ccgcttcgtc tccgttcagc
     1501 gcgcagatcg ccgtatcgac acggtccagc aactgatccg cgctcagcga cccggcaccc
     1561 gcgggaccct gcgacggcgc cggatgcacc tcgccgagac cctgctggtt gtgagccacc
     1621 cggttggcaa acatcgccgc gacataaagc agccgcaacc ggcgcgggtg atcgaaattg
     1681 tcgaagaacc acgcgagcgt gttgtgatac tcgtaacaat ggtgcggcat gttgaacgcg
     1741 ttcggatccc gggtttccag cacgatctgt ccgaccgcca attgcagcac gtcgaggata
     1801 cggcgcggat ctttcccgga cttcagcagt ttcgttaccg tttccagggt ttccacctcg
     1861 ccttgccgaa gcacggcgtc ggtgagttcc gcggcgtcct gctggttcac cggctgattg
     1921 ttgcgcagga tagccagttc ggcctcactg accccgccat acgggaccgc acgcaacgtt
     1981 tcgccctcga tcatcatctt gatgtagttg caggcgactt cataggtcga ataccagcgc
     2041 ggaccaacgg cgatatccag cgccccggca tagaccacgt cgtgcgcgtt atcccagccg
     2101 atcgcgttgc cgatctcgac cgtggcgcgc gcacgatagg ccttgtgacc agtggtgtag
     2161 gaccgattgt gcaacgtccg gtcctgcaca tccatcaatc cggcaaagac catttccgcc
     2221 agcacgtcct tacgttccgc ggtattctcc atcagcccga gaaacacccg atacgcctcg
     2281 atcacctggc cgcgatgcac cagcgtcatc cagttgttca gacgctcctt cagcggaccg
     2341 gcctgagcga tcggctgctg atcgggccag taaacgacgg gcgccggtgg ggcttcctcc
     2401 acctggacgt tgccgcgatg gcgcgtgtag tggccgggcg ccttgtcgat cttctgattc
     2461 cagatatcca ggccggtcgg aatgtaccag atggtttgcg ccatcggcag catcgccaga
     2521 tgcgacggca gcatgcgatt caggttgacg gtagcacgcg cactcagcag gcaatggtcg
     2581 ttgttgacga agttggggta accgtcgtcg atccgctcat gatagggcac atgggtgaaa
     2641 ggggcatgga tgcgaacacc ctgggcgacg atctccggca gcggccgccc ggcgcgcacc
     2701 agttcgtaat acacatcact cgcgcctttc tggtcacgca tcaggcagcg gtcttccagc
     2761 ctgtcgtaaa gaccgcgcac cgcgctgtca cccttggcat ccgaagcgat gttggtatcc
     2821 atctttaggt tccctccgac tatcccgtcg atttcgccga tcctacgctt gacatgccgg
     2881 ccgcgacaac catggtgcgg gtcctcaggg ggggaaatag catgatcagc agcgcatgga
     2941 ccgtcagtat cctggcggga accggtgaac aaggctattc cggagacgga tcgaccgccg
     3001 ccaatgcccg cttgaacaat ccgttcgatc tgacctttct ccccgacgga gacttggttt
     3061 tttccgacac tttcaatcac tgcatccgtc gtgtcgccac cgcaacaggg atcataacga
     3121 cgatttgcgg cagcggccga aagggatttt ccggcgatgg cggtcccgct tcccacgcag
     3181 agctgaacga accctacggc gtggtcgctg accgctccgg ccgggtgttt ttcgccgacc
     3241 gcctgaaccg gcgggtgcgc gttatcgata ccaccggcac aatctccacc ctggcgggca
     3301 acgacaccgg cacatacagc ggcgatggcg gccccgccgc ccaagccggc ctggtcgagc
     3361 ccaacggcct ggcactcagc cccgaccaga cccaactgtt catcgccgac gtcgccggcc
     3421 accgcgtccg cgtggtggac ctgacgacca acaccatcca gacagccgcc gggacaggcg
     3481 acgcacgcca tgacggcgac agcggccccg ccaaccaggc cgccgtcttc ggtgcccgcg
     3541 ccgtggcctt cgccccggac ggatcgctgt acgtgatgga gcgccaagga agctgcatcc
     3601 gccgcatccg ggacgggatc atcgagacag tcgccggcac cggcgcccga ggctacgccg
     3661 gtgacggtgg cgacgcgcat ctcgcggtat tcgatgcccc aaaggaaatg gcggtcgatc
     3721 cggacggcaa catcttcgtg gtagacaccg aaagccacgc gatccggctg atcgatgcaa
     3781 aaacctggat cgtaacgacg atcgcctcag gccttgcccg cccgcacggg gcactcgtcg
     3841 ccccggacgg cagtctcctg gtcggcgaca gcgaacatca tcaggtgata cggctgacgc
     3901 acggatgacg ttgcgaccgt tacaaggccg tgctgcgccg aatccctctc atccggccaa
     3961 cctgtttccg aaccttattt ggtagttacg gttgtgagac cagaaacatt ctatgtctgg
     4021 tgacgttcga cgtactcgcg cagggcagca ttgatgcgtg tctggtagcc ttcaccgccg
     4081 cgtttgaacc actccaacag atcggaatcc aatctcagag acgtaagatg cttcacggga
     4141 cgataaagcc cgccacgaac tgccccactc caatcagtga cctcgggcat gtccgaggtg
     4201 tcgatctcgt cctccggcat ggcggcaacc acctccaggg cagcctgttc ctctgctgtc
     4261 agcttcctag tgttcgccat cttcatatgc cttccgctct tttcgtgttg ctttcctggc
     4321 actgatgata cggcccgggg cgctgtctcc gtcaggccac gtgtgggcaa tgaacaggag
     4381 gacaccgtgg gcttcgcaaa tcgtatccca tcgatcgccg tctggatgag ggtcgtgccg
     4441 agacaacgcc aggggatcga caagcgctac ctcaccaata catcagcggc agccgatgtt
     4501 tagcgcgatt gatcgcgtcc ttgtccggat cccacgtcca aagcaactct ctctcctgta
     4561 tctacgaaaa ggtagataca ggag
//
LOCUS       DATAVD010000148         2907 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1502974, whole genome shotgun sequence.
ACCESSION   DATAVD010000148 DATAVD010000000
VERSION     DATAVD010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2907
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1502974"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            405..1235
                     /locus_tag="VHX39_02680"
     CDS             405..1235
                     /locus_tag="VHX39_02680"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3990060.1"
                     /translation="MASIMDRQARPVEDDRPISGQSTGLDLYPDASPRLGPRVMVIED
                     DPDIALVLQRYFQRSGIHADLVYTGAEAVALKPIAGPDVVLVDLELPDVEGSTLIRWL
                     KEQHDCGIIVVSGSHDEATRVLSLELGADDYVTKPPGLRELVARIRAVHRRVGERIVL
                     AANSIRKASERTTAAVGGFAVDIHARQVRDASGRLVNITAAEFAVLAALIEANGEPVS
                     RDRLSEVALHRPGHSEDRGVDQLIFGLRQKLSGPGARCRFIQSVRNTGYLIADAHSDP
                     "
     gene            1375..2826
                     /gene="sthA"
                     /locus_tag="VHX39_02685"
     CDS             1375..2826
                     /gene="sthA"
                     /locus_tag="VHX39_02685"
                     /EC_number="1.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019092393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003957 - NAD(P)+ transhydrogenase
                     (B-specific) activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Si-specific NAD(P)(+) transhydrogenase"
                     /protein_id="HEX3990061.1"
                     /translation="MPDGPSPIPLALPALAERPVSGSHDFIIIGSGPAGRRAAIQAAK
                     LGKSVLVVEKGRRVGGVSVHTGTIPSKTLRETVLNLTGWRERGFYGRAYRVKKDIQAK
                     DLMMRLHMTLDHEVDVLEHQFARNAVRTITGMARFLDPHHVEVVTEGDGSRVYRGERI
                     LLAVGTRPHRPSDVPFDGRTVLDSDEIVEIDHLPRSLTVIGAGVIGIEYATIFSALDV
                     AVTLVDAHETFLDFIDRELIDDFTHQLRDRGMTLRLGSKVTGIEFENSRPVTVLESGR
                     RIRSEMLLYAVGRMGATEPLNLECCGLATDLRGRLKVDAHTFQTSVPHIYSAGDAIGF
                     PSLASTSMEQGRIAACHAFGMKLPPAPEFFPYGIYTVPEISTVGMSEQEVRKLNIPYE
                     CGIARFRETSRGHIMGLNTGMMKMIFSIATGRLLGVHIVGEGATELVHIGQAVLNLKG
                     TLDYFIENTFNYPTLAEAYKIAALDAWNRMARV"
BASE COUNT          599 a          837 c          870 g          601 t
ORIGIN      
        1 cagcgcgcgt tgtggcaaag cattacaaca gttgatgcat tttcgcaccg taaccacagt
       61 gaaaggcatg ctgcctgcca atgacaaatg cgtatttaaa tgcaccggcg tcgcacgaat
      121 ttaagaaagt catttctgtg aaacacccga tgtccaagcg aaaccccagg tgtgccggtg
      181 gcagtcaact gggccttcat gacgctcgct caatctcagc ctttcgtcag ccgcagccgg
      241 aggcgatgtg gcaatacgtt gcgaaatcct tacatatttg gcgttcttcg cagcagtata
      301 caagtgagtc caaggttgaa atcgagttta ctccatctta ctctttaaca gttgcaacgt
      361 gatcgccgtg acggagcgtt ccgccgatca tcgcaggagt gggaatggct tcaattatgg
      421 atcgccaggc acggcccgta gaggatgacc ggccaatatc cggccaatcg accggtctcg
      481 atctttatcc tgacgcttca ccacggctgg gaccgagggt catggtgatt gaagacgatc
      541 ctgacatcgc attggtactc cagcgttatt ttcagcgatc cggaatccat gccgatctgg
      601 tttacactgg ggcagaggcg gtagcgctga agcccatcgc aggtcccgac gtcgtgttgg
      661 tcgacctgga gctgccggac gttgagggat cgacattgat ccgctggctg aaggagcaac
      721 acgattgtgg aattatcgtg gtgtcgggat cccacgatga ggcgactcgc gttctcagcc
      781 tggaacttgg cgcggatgat tacgtaacca aaccacctgg tctgcgggaa ctggttgccc
      841 ggatcagggc ggtgcaccgc cgggttggcg agcgcattgt gttggctgcg aacagcatca
      901 gaaaggcgtc agaacgaaca actgccgccg ttggcggatt tgccgtcgac atccatgccc
      961 gtcaggttcg cgatgcatcc ggcaggctgg tcaatatcac cgcggcggaa tttgccgtgc
     1021 tggcggcgct gatcgaggcc aatggcgagc cggtttcccg cgaccgtctt tcggaggtcg
     1081 cactgcaccg tccgggtcat tctgaggatc gcggggtcga ccagctgatt ttcgggctgc
     1141 gccagaaatt gtcgggaccc ggtgccaggt gccggtttat ccaatcagtt cgcaacacgg
     1201 ggtacctgat tgccgatgca cattccgacc cttgattgcg aggaccaaat tcttcgacgt
     1261 ctggcgaccc caacacaaat tcgccgaaat gccacatctc agcaagtttc ctcgcgccag
     1321 aatggttccg actggttatg atgcaccgca gcaccactca gggaaccaag gcccatgccc
     1381 gacggtccgt cgcccatccc gttggccctg cccgctctgg cggaacgacc ggtatcggga
     1441 agtcacgatt tcatcatcat cggcagcggc cccgccggac ggcgcgccgc gatccaggca
     1501 gccaaactgg gcaagtcagt tctggtcgtt gagaaaggcc gccgggtcgg tggcgtatcg
     1561 gtccacaccg gcaccattcc ctcgaagacg ctgcgggaga ccgtgctgaa cctgaccggc
     1621 tggcgggagc gcggattcta tggccgtgcc tatcgggtca agaaggatat ccaggccaag
     1681 gacctgatga tgcggctaca catgacgctc gatcatgagg tcgacgtgct ggagcatcag
     1741 ttcgcccgca acgcggtgcg tacaatcacc gggatggccc ggttcctcga cccacaccac
     1801 gtcgaagtgg tgaccgaagg cgacggttcg cgggtgtatc gcggcgaacg gatcctgctg
     1861 gcagtaggca ccaggccgca ccggccgtcc gatgtgccat tcgatggccg caccgtgctc
     1921 gacagcgacg agatcgtcga gatagaccac ctgccgcgca gcctgacggt gattggcgcg
     1981 ggggtgatcg gcatcgaata cgccaccatc ttcagtgccc tcgacgttgc ggtgaccctg
     2041 gtcgacgcac atgagacatt cctcgatttc atcgaccgcg aactgatcga cgattttacc
     2101 catcagttgc gcgatcgtgg gatgacgctg cggctcgggt ccaaggtcac cggaatcgaa
     2161 ttcgagaaca gccggccggt cacagtactt gaaagcgggc ggcgtatccg ctcggaaatg
     2221 ttgctttatg cagttggccg gatgggtgcc accgagccgc tcaatctcga atgttgtggt
     2281 ctggcgacgg atctacgcgg gcggctgaaa gtcgatgccc atacgtttca gacatcggtg
     2341 ccacacatat actcagcggg cgatgcaatc ggtttcccca gtctcgcttc gacctcgatg
     2401 gagcaaggac ggattgctgc ctgccacgcg ttcggcatga agctgccgcc ggctccggag
     2461 ttttttccgt acggaattta taccgtgccg gaaatttcga ctgtgggcat gagcgagcaa
     2521 gaggtacgga aacttaacat cccctacgaa tgcggtattg cgcgattccg ggaaacttcg
     2581 cgcggacaca tcatgggatt gaacaccggc atgatgaaga tgattttttc catcgccacc
     2641 ggccggcttc tgggggtgca catcgtcgga gagggcgcga ccgaactggt acacatcggc
     2701 caggctgtgc tgaacctgaa aggcacgctg gattacttca tcgagaacac gttcaattat
     2761 ccgacgctgg cggaggccta caagatcgcc gcattggacg cctggaaccg gatggcgcga
     2821 gtttagcgcc ggcctctact gaactttcat caattcagtg tcggcgcttc ggccggctgt
     2881 tgattgccca accgttcgcg aagtcgc
//
LOCUS       DATAVD010000149         1929 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_759477, whole genome shotgun sequence.
ACCESSION   DATAVD010000149 DATAVD010000000
VERSION     DATAVD010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1929
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_759477"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..594
                     /locus_tag="VHX39_02690"
     CDS             <1..594
                     /locus_tag="VHX39_02690"
                     /inference="COORDINATES: protein motif:HMM:TIGR03871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinoprotein dehydrogenase-associated putative
                     ABC transporter substrate-binding protein"
                     /protein_id="HEX3990062.1"
                     /translation="QVIGFVRNTLNALRCDVVIGVAVGDDLTQTTNPYYHTTYALVYK
                     PGTGLDGVQTLEDARLKGKRIGVIAKTPPSTVLVEDGLMAMAKPYPLTVDTRVEVPSA
                     TMVDDIAAGRIDAGVLWGPIAGYYAQHATPRLVVVPLLQEHEQMDFSIAMGVRHSDQD
                     WKRKLNRLIAENQPEIDRILQQYGVPLLDAQGKPMTP"
     gene            591..1157
                     /locus_tag="VHX39_02695"
     CDS             591..1157
                     /locus_tag="VHX39_02695"
                     /inference="COORDINATES: protein motif:HMM:TIGR03865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent catabolism-associated CXXCW motif
                     protein"
                     /protein_id="HEX3990063.1"
                     /translation="MRAAGHRIVALCVVLLVCAAGGAPAPPEQSGYRMDHYRAPTPAT
                     LRGAIVLSTAQARVDWERHDAVFIDVLPQAPRPLGLPTSTIWRPKPRYDIPGSLWLPD
                     TGYGALAPVMQDYFERGLQQATDGKHDRLIVFYCLTGCWMSWNAAKRALALGYTHVAW
                     YPDGTDGWAADGLPLEVRTPLDRPQAAE"
     gene            complement(1165..1797)
                     /locus_tag="VHX39_02700"
     CDS             complement(1165..1797)
                     /locus_tag="VHX39_02700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990064.1"
                     /translation="MTFPRARIAALTFGAVLLFGTLAKAAPPGPRDPDWPCQQIKVPQ
                     LSLAAVWAGPPVDPQQVDWQHDPSVADLVDDIAQRRVLLLQAQAKIRAFAAQQAEAQK
                     QQKLVAVLAGLFNVLDAERSAVIAGLDRFGARQQELAAEIRQNNEKLRQMQADSAADT
                     SQVNQMVQRVTWEAEVFQDRRQSLSYACDVPGKIEQRLFALARTIQQNLD"
BASE COUNT          334 a          563 c          664 g          368 t
ORIGIN      
        1 caggtcatcg gcttcgtgcg caatacgctg aatgccttgc gctgcgacgt ggtcatcggt
       61 gtggcggtcg gcgatgatct gacacagacc accaatccct attaccacac cacctatgcc
      121 ctggtttaca agccaggcac cgggttggat ggcgtccaga ctctggagga tgcacggctg
      181 aagggcaagc gtatcggtgt gattgccaaa acgccaccat ccaccgtgct ggtggaggac
      241 gggctgatgg cgatggccaa gccttatccg ctgaccgtcg acacgcgagt cgaggtgccg
      301 tccgcgacca tggtcgatga cattgcggcc ggacggatcg atgccggcgt gctgtggggg
      361 ccgatcgcgg gctattacgc gcagcatgcg actccacggt tggtggtcgt gcctttgttg
      421 caagagcacg agcaaatgga tttcagcatt gcgatgggcg tgcggcacag cgatcaggat
      481 tggaagcgca agctcaatcg gctgattgcc gagaaccaac cggagataga tcgtattctg
      541 cagcagtacg gcgtgccatt gctggacgca caggggaaac cgatgacgcc atgagggcgg
      601 ccgggcatcg gatcgtcgct ctgtgcgttg ttctgctggt ctgtgcggcc ggcggggcac
      661 ctgcgccgcc agagcaatcg ggctatcgca tggaccacta tcgcgcgcca acgccggcga
      721 cattgcgggg cgctatcgtg ttgtctaccg cgcaggcgcg ggtggattgg gaaaggcatg
      781 acgcggtgtt catcgacgtt ttgccgcagg cgcctcggcc gctgggattg ccgacatcga
      841 cgatctggcg gccgaagccg cgttacgaca ttccgggcag cctatggttg ccggacaccg
      901 gatacggcgc gttggcaccg gtcatgcaag attattttga acgtggtttg caacaagcga
      961 ccgacggcaa acacgatcgt ctgattgtgt tctattgcct gaccggctgc tggatgtcgt
     1021 ggaatgcggc gaaacgtgcg ctggcgctcg gttatacgca tgttgcctgg taccccgacg
     1081 gtaccgatgg ctgggccgcc gacggattgc cgttggaggt gcgcacgccg ttggaccgac
     1141 cgcaggcagc ggaatgagta aacttcagtc gaggttttgc tggatcgtgc gggccagtgc
     1201 gaacaatcgc tgttcgattt tgcccggcac gtcgcaggca taactcaagg actggcgccg
     1261 gtcctggaac acctcggctt cccaggtgac gcgttgcacc atctggttga cctggctggt
     1321 gtcggcggcg gaatccgcct gcatctgccg caacttttcg ttgttctggc ggatttcggc
     1381 ggcgagttcc tgttggcggg cgccgaaccg atccaggccg gcgatgacgg cgctgcgctc
     1441 cgcgtccagc acgttgaaca ggccggcgag gactgcaaca agcttctgct gtttctgcgc
     1501 ttcggcctgt tgcgcagcga aggcccggat ctttgcctgc gcttgcaaga gcagtacgcg
     1561 gcgctgggca atgtcgtcga ccaggtcggc gacggagggg tcgtgctgcc aatcgacctg
     1621 ttgcgggtcg accggcggac ccgcccaaac cgccgcgaga gagagttgcg gcaccttgat
     1681 ctgctggcac ggccagtcgg gatcgcgcgg acctgggggg gcggctttgg ccagcgttcc
     1741 gaagagcaat accgcgccga acgttagtgc ggcgatgcgg gcgcgtggga atgtcatccc
     1801 gcggctccgc cacgccgggc gatcagtccg cgcgccgggt cgtaggcaat gatcgcgccg
     1861 gcggtgaaca ggatcgtcat cgccgccacg acggcgagcg agaaccagtc gacctgcgcg
     1921 tacagcgcg
//
LOCUS       DATAVD010000150         3386 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1316450, whole genome shotgun sequence.
ACCESSION   DATAVD010000150 DATAVD010000000
VERSION     DATAVD010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3386
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1316450"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /locus_tag="VHX39_02705"
     CDS             <1..252
                     /locus_tag="VHX39_02705"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423023.1"
                     /note="catalyzes the formation of L-tryptophan from
                     L-serine and 1-(indol-3-yl)glycerol 3-phosphate; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEX3990065.1"
                     /translation="EHSWLHDIGRAEYVSATDQEALAAFQLCTRTEGIIPALEPAHAL
                     AYVTKLAPTMDSEKIILMNLCGRGDKDIFAVAEHLGVKL"
     gene            249..1064
                     /gene="trpA"
                     /locus_tag="VHX39_02710"
     CDS             249..1064
                     /gene="trpA"
                     /locus_tag="VHX39_02710"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010669038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEX3990066.1"
                     /translation="MSRIAARFADLKRQGRGALIPFLEAWDPDHATSMALLRGMPKAG
                     ADLIEIGMPFTDPMADGPIIQAAGKRGLAAGVKVADVLTMVRDFRAADDNTPVVLMGY
                     LNPILSYGPERFCIDAAAAGVDGLIIVDLPTEESDLLLPYSNANGLDFIRLIAPTTDD
                     ARLPHVLNGSSGFVYYVSITGITGTRSATAEHLEAAIPRLRKATNLPIAIGFGVRSPE
                     QAGTASRIADAAVVASALIDTLSANLAPDGKALPGAVEKVLDQVRALAAAVRR"
     gene            complement(1112..1963)
                     /locus_tag="VHX39_02715"
     CDS             complement(1112..1963)
                     /locus_tag="VHX39_02715"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HEX3990067.1"
                     /translation="MPDVIPVLAADGPVLLFGGCYSNLQATQALLDQAGRLGIPPDRI
                     VCTGDVVAYAADPMATVDLVRASGMHVVMGNCEESLGYGAVDCGCGFAAGSACDLLSV
                     AWYAHADARLDDDARAWMRGLPRRIDLIVGGHRLAVIHGSPDSINQFVFASVPDGTLL
                     DLIASSGCDGVIGGHCGIPFTRVANGRLWHNPGAIGVPAHDGTPRVWFSVISAQGREI
                     AIRHLPLDYNYVAAAAAMRTAGLPSGYADALGSGLWPSTDVLPAAERGKGGVPLAFAP
                     VIWSGKL"
     gene            complement(1956..>3386)
                     /locus_tag="VHX39_02720"
     CDS             complement(1956..>3386)
                     /locus_tag="VHX39_02720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990068.1"
                     /translation="QTLRTIGPWLVLLAFSALTWWVTPRRVNAAQFFDGRRDDGRPPG
                     VLMVAMSAAITWVFAKSIANASDLAYGYGLTGGIGYALYYLSFVVAGVAIYLLRTRGG
                     YLSLPHFLVSKYGASAAKLFMVLITFRLVNEIWSNTKVMSLYFGSEGSGAYWTAVVLI
                     SIFTVAYAWRGGMRASLTTDRIHIFLAFVLLALVLTVLFPRLAAKGIPTVAQATHDSG
                     VTFCLLALVQIFSYPFHDPVLTDRGFLNRPDQALRAFLLAAVLSGGFIFLFSIIGLYG
                     LAFGMQSPPSVTVPSAFGLAMLMVFNAIMLMTGGSTIDSTLTSIAKLTGRDWRNDALD
                     AVPRQVSTGRVAMVVVAIVGNLPLLTIYLGDKVGPAIIAATTISGTMVMGLAPAFLLS
                     WLRQAGGVSFHMAFWPGVAIGLTRAMETFGHLKIFPDAVKLGTGPFALDLGVNFWGVG
                     LCTVGFVVGALVAPRSAVVLAQAGNA"
BASE COUNT          722 a         1202 c          957 g          505 t
ORIGIN      
        1 gaacattcct ggctgcacga catcggccga gcggaatacg tctccgccac cgaccaggaa
       61 gccctggccg ccttccagct ttgcacaagg accgagggca tcatccccgc cctggaaccc
      121 gcccacgcgc tggcttacgt aacgaaactg gcgcccacga tggattcgga aaaaatcatc
      181 ctgatgaacc tctgtggccg aggcgacaaa gacatcttcg ccgtcgccga acacctgggc
      241 gtcaagctat gagccgtatc gccgcccgtt tcgccgatct caagcgccag ggccgaggcg
      301 ccctgatccc attcctcgaa gcctgggacc cggaccatgc cacctccatg gccctgctcc
      361 gcggcatgcc gaaggccggt gccgatctga tcgagatcgg catgcccttc accgatccca
      421 tggccgatgg cccaatcatc caggccgccg gcaagcgagg cctcgccgcc ggcgtaaagg
      481 tcgccgacgt cttgacgatg gtgcgcgact tccgcgccgc cgacgacaac accccggtcg
      541 tgctgatggg ctacctgaac cccatcctgt cctacgggcc ggaacgcttt tgcatcgatg
      601 cggccgccgc cggtgtggac ggattaatca tcgtcgatct gccgacggaa gaatccgatc
      661 tgctgctgcc ctacagcaac gccaacggcc ttgatttcat ccgcctgatc gcacccacca
      721 ccgacgacgc ccgtttgccg catgtcctca acggcagctc cggcttcgtc tactatgtca
      781 gcatcaccgg catcaccggc acccgcagtg ccaccgccga acatcttgaa gcggccatcc
      841 ctcgcctgcg caaggccacc aacctgccga tcgccatcgg cttcggcgtc cgctcgccgg
      901 agcaggccgg aaccgcgtcc cggatcgccg acgcggcggt tgtggcctcg gcgctgatcg
      961 atacgctgtc ggcaaacctc gcccccgacg gaaaagcatt gccgggggca gtagagaaag
     1021 tgctggacca ggtgcgggcg ttagcggcgg ccgttcggcg ctaaacgtct gtcttgccgg
     1081 tcggacagcc aacccgaacc gggcccggcc gttacaattt gccggaccaa atgacagggg
     1141 cgaacgccaa cggcacgcca cccttgcccc gttccgccgc cggcaggaca tccgtgctcg
     1201 gccacagccc ggatccgagg gcatcggcat aacccgacgg cagccccgcg gttcgcatcg
     1261 cggctgccgc cgcaacgtag ttgtagtcca acggcaaatg ccgaattgcg atctcccgcc
     1321 cctgtgccga gataacactg aaccagacgc gtggcgtgcc gtcgtgcgca ggaactccga
     1381 tcgcgcccgg attgtgccaa agccttccat ttgccacgcg ggtgaacggg atcccgcaat
     1441 gaccgccgat tacgccgtca cagcccgagg acgcgataag atcgagaagc gttccatccg
     1501 gcaccgaagc gaagacgaac tggttgatgc tgtcggggct gccatggata accgccagcc
     1561 gatgcccgcc gacgatcaga tcaatacggc gaggcaggcc gcgcatccaa gcgcgggcat
     1621 catcatcaag gcgggcatcg gcgtgcgcat accaggcgac ggacaacagg tcacacgccg
     1681 acccggcagc gaaaccacag ccgcaatcga ccgcgccgta acccagcgac tcctcgcagt
     1741 tgcccattac gacgtgcatg ccgctcgcac ggaccaggtc gaccgtggcc atcggatcag
     1801 ccgcgtatgc gaccacatcg cccgtgcaga cgatccgatc cggcggaatg cccagtcggc
     1861 cagcctgatc gagcaaagcc tgcgtcgcct gcaaattgct atagcagccg ccaaacagca
     1921 gcaccggccc atccgctgcc aggaccggga tcacgtcagg cattccccgc ctgggccaga
     1981 accaccgcgg atcgaggtgc caccagcgcg ccgaccacga aacccacggt acacaatcca
     2041 acaccccaaa agttgacgcc caggtccagc gcgaacggtc cggtcccaag cttgaccgca
     2101 tcggggaaaa tcttcagatg cccaaatgtc tccatcgcac gtgtcaaacc gatcgccaca
     2161 cccggccaga acgccatgtg gaaactgacg ccaccagcct gccgtagcca ggacaacagg
     2221 aacgccggcg ccaaccccat gaccattgtg ccgctgatag tggtcgccgc gatgatcgcc
     2281 gggccgacct tgtcgcccag gtagatcgtc agcaaaggca ggtttccaac gatcgccacc
     2341 accaccatcg ccacccgccc ggtcgaaacc tgtcttggta ccgcatccag cgcatcgttc
     2401 cgccaatccc gcccggtcag cttcgcgatg ctggtcaacg tcgagtcgat cgtcgaaccg
     2461 ccggtcatca gcatgatcgc attgaacacc atcagcatcg ccagcccgaa tgcgctcggc
     2521 accgtaacgc tcggcgggct ctgcatcccg aacgccagcc cgtacagccc gataatgctg
     2581 aacaggaaaa tgaacccgcc gctcagcacc gcggcaagga gaaaggcacg cagggcctga
     2641 tccggccgat tgagaaaacc ccggtcggtc agcaccggat cgtggaacgg ataggaaaat
     2701 atctggacga gcgccagcag gcagaaggtg acaccgctat cgtgcgtggc ctgcgcgacc
     2761 gtcggaatgc ccttcgccgc caaccgcgga aacagcacgg tcaggaccag tgccaataga
     2821 acgaacgcca ggaagatatg gatgcgatcg gtcgtcaaac tggcccgcat gccgcctcgc
     2881 cacgcatagg ccacggtaaa gatgctgatc agcaccacgg ccgtccaata tgccccgctc
     2941 ccctccgacc cgaagtagag cgacatcacc ttggtgttgg accatatctc gttgaccagc
     3001 cggaaggtga tcagaaccat gaacagtttc gccgcgctcg cgccgtattt cgagaccagg
     3061 aaatgcggca acgacaggta gccgccacgg gtccgcaaca gatagatcgc cacccccgcc
     3121 acgacgaagc tgaggtaata cagcgcatag ccgatgcccc cggtcagtcc gtagccgtag
     3181 gcgaggtcgg acgcgttggc gatcgacttg gcaaacaccc aggtgatggc ggcactcatg
     3241 gccaccatca ggacgccggg cggcctgcca tcatctcttc ttccatcgaa gaactgagcc
     3301 gcattcaccc gtctcggcgt cacccaccag gtcagggcac tgaaggccag aagaaccagc
     3361 catgggccga tcgtccgcaa tgtctg
//
LOCUS       DATAVD010000151         1553 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_571832, whole genome shotgun sequence.
ACCESSION   DATAVD010000151 DATAVD010000000
VERSION     DATAVD010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_571832"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..438
                     /locus_tag="VHX39_02725"
     CDS             <1..438
                     /locus_tag="VHX39_02725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990069.1"
                     /translation="GIDAPGKGDLWREYQDWRHSEKAQQALRNGLIGSPDTIRKRLRL
                     FEEAHVDQVILLNQAGKTSHQDICDSLELFAKEVMPEFHARQPAQEQWKQDVLDRKIV
                     LQDLDTERYDLYSHQNEDIVRLTPDQLRQRMAEKEKLAAAAGE"
     gene            458..>1553
                     /locus_tag="VHX39_02730"
     CDS             458..>1553
                     /locus_tag="VHX39_02730"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03860.1"
                     /note="This protein belongs to a clade of FMN-dependent
                     monooxygenases, within a broader family of
                     flavin-dependent oxidoreductases, the luciferase-like
                     monooxygenase (LMM) family, some of whose members use
                     coenzyme F420 rather than FMN; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NtaA/DmoA family FMN-dependent monooxygenase"
                     /protein_id="HEX3990070.1"
                     /translation="MRQMVMVGFLQAQNCTNLVSSWRHPESRTDTWSPEYYADLGRVL
                     EEGKFQVAFFDDRLAMPDRYGNDHKHTVENGIRCVKMDPLVVLMVMANATKRLGIGAT
                     RTTTYYEPFDVARAFATIDLMTHGRAAWNVVTSMNDGEALNMGKDLHPEHDGRYDQAE
                     EFMEIVMGHWQSWDDDAIVQDKQTGLFAHGDKVRRIDYRGKYFNSRGPFTVPRSEQGH
                     PVVIQAGQSARGKRFAAKWGELLFVGSPPTLDIGRRNYKQIKEAVAANGRNPDHCIIA
                     PSAYIICGESKSEAEDKLALTERLTPDIDALSLLSEAMNFDFASKGIDEPFTDDELDN
                     ISGTQSMRDRVLAVSGIKNPTPRDFVKFSSR"
BASE COUNT          363 a          422 c          490 g          278 t
ORIGIN      
        1 gggatcgatg cgccgggcaa gggcgatctg tggcgggagt accaggattg gcgccactcg
       61 gagaaagctc agcaggcgtt gcgcaatggg ctgatcggct cgccagacac cattcgcaag
      121 cggctgcggc tgtttgaaga agcgcacgtc gatcaggtga ttttgctcaa tcaggcgggc
      181 aagacctcgc accaggatat ctgtgacagc cttgagttgt tcgcgaagga agtcatgccg
      241 gaattccatg cgcggcagcc ggcgcaggag caatggaagc aggatgtatt ggaccgcaag
      301 atcgtgctgc aggatctgga taccgagcga tacgatttgt actcgcacca gaatgaggac
      361 atcgtgcgtc tgacgccgga ccaattgcgc cagcgcatgg cagagaaaga gaaattggcc
      421 gccgcggccg gcgagtaagc cgcacaggag acgttcgatg cgacaaatgg tgatggtggg
      481 ctttctgcag gcacaaaact gcacaaacct ggtgagttca tggcggcatc cggaatcgcg
      541 caccgataca tggagcccgg aatactacgc cgatctcggc cgcgtgctgg aggaaggcaa
      601 gttccaggtg gcgttcttcg acgaccgcct cgcaatgccg gaccgctatg gcaatgacca
      661 caagcacaca gtcgagaacg gtattcgatg cgtcaagatg gatccgctgg ttgtgctgat
      721 ggtcatggcc aacgcgacga agcgtttggg catcggagcg acgcgcacga cgacctatta
      781 cgaaccgttc gacgtcgctc gggcttttgc caccatcgat ttgatgaccc acggccgagc
      841 ggcctggaac gtcgtgacct cgatgaacga cggcgaggcc ctgaacatgg gcaaggatct
      901 gcatcccgaa cacgacggcc gctatgatca ggccgaagag ttcatggaaa tcgtcatggg
      961 tcattggcag tcgtgggacg acgacgcgat cgtgcaggac aagcaaaccg ggttgttcgc
     1021 acacggcgac aaagtgcgtc gcatcgatta tcgaggaaaa tatttcaact cgcgcgggcc
     1081 gttcacagtg cctcgatctg aacaaggtca cccggtggtg attcaggccg gtcagagcgc
     1141 acgcggcaaa aggttcgcag cgaaatgggg ggagttgctg ttcgtcggca gtccgccgac
     1201 attggatatc ggccgccgga actacaagca gatcaaggaa gccgtcgccg ccaacggccg
     1261 caatccagac cattgcatca tcgcaccgtc cgcttacatc atttgcggcg agtcgaagtc
     1321 ggaagcggaa gataaactgg cgctgaccga acgcctgacg ccggacatcg acgcgttatc
     1381 gctattgtcg gaagcaatga atttcgactt tgcgtcgaag gggatcgacg aaccgttcac
     1441 cgatgatgag ttggacaaca tctccggcac gcagtcgatg cgcgaccggg tgctggcagt
     1501 ctcagggatc aaaaacccga cgccgcgtga cttcgtcaaa ttcagcagtc gcg
//
LOCUS       DATAVD010000152         1700 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3365065, whole genome shotgun sequence.
ACCESSION   DATAVD010000152 DATAVD010000000
VERSION     DATAVD010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3365065"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..551
                     /locus_tag="VHX39_02735"
     CDS             <1..551
                     /locus_tag="VHX39_02735"
                     /inference="COORDINATES: protein motif:HMM:NF014136.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3990071.1"
                     /translation="GGVTPIAAAQKGGTTMIDLATTLAGCVARFADRHSDWPVFGFET
                     AKNPCFARIQRRYLGASGSVDSKDLRSSLPATAFTMSIQTVPVGNMIPKHCHEVEVVF
                     FILDGQCTVRCFAGDEVTELSLGRWNLMKVPVGLQHELHNTGDVDCQVQTSLSAPQPR
                     RPQYEDPELLALQAAVTEPVPA"
     gene            complement(529..735)
                     /locus_tag="VHX39_02740"
     CDS             complement(529..735)
                     /locus_tag="VHX39_02740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990072.1"
                     /translation="MDAVEDEIAAAQVADRAIRGGGSRDEDFGMGPAAAVRIASQNAA
                     FSACISGRLYIGRLACGIRPERVP"
     gene            complement(1303..1455)
                     /locus_tag="VHX39_02745"
     CDS             complement(1303..1455)
                     /locus_tag="VHX39_02745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990073.1"
                     /translation="MMFTLIDRPSIPVPTSPKTHRFRDPTVGNVPEDRIALVVIPQSL
                     DSPVFF"
     gene            1454..>1700
                     /locus_tag="VHX39_02750"
     CDS             1454..>1700
                     /locus_tag="VHX39_02750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990074.1"
                     /translation="MEFDRSYCLHDNDNLGLTLADGKLLLALVQQITAGGRQVFAAVA
                     KADTGNEAANSRLVSHRHADAARNAACQRIVNGRSCMH"
BASE COUNT          315 a          524 c          546 g          315 t
ORIGIN      
        1 tcggcggcgt cacgccgatt gccgccgctc aaaaaggagg aacgacgatg atcgatctcg
       61 caaccaccct ggccggttgc gttgcccgct tcgccgaccg gcactcggac tggccggtgt
      121 tcggatttga gacggcaaag aatccatgct tcgcccgcat ccagcgccgc tatctaggcg
      181 ccagcgggtc cgtcgattcc aaggacctgc gcagcagcct gcctgcgaca gcgttcacca
      241 tgtcgatcca gaccgtgccc gtcggcaaca tgatcccgaa acactgccac gaggtggagg
      301 tggtgttctt catccttgat ggccagtgca cggtgcgctg cttcgccggc gatgaggtga
      361 cggagttgtc gctcggccgc tggaacctga tgaaggtgcc ggtcggcctg caacacgagt
      421 tgcacaacac cggcgacgtc gattgccagg tgcagacctc gctctcggcc ccgcagccgc
      481 gccggccgca atacgaggat ccggagttgc ttgcgctaca agccgcggtc acggaacccg
      541 ttccggcctg atgccgcaag ccagcctgcc aatgtacaac ctgccggaga tgcaggcgga
      601 aaacgccgca ttctggctgg cgatccgcac tgcggcggcc ggacccatgc cgaagtcttc
      661 gtcgcgcgac ccaccgcccc gtatggctcg gtcggcgacc tgcgcggctg cgatttcgtc
      721 ttcaacagcg tccattcgaa ctcgggcgtg aacctgccgc gccgggcgat cgccgatctg
      781 gccgatggca ggccgttctt cgggtccatc gccgaaaccc acagccagcc tggcaacctg
      841 gagcgcgtgg cgcgtggccg ttgccacctg tggggactgt gtgacctatg ccgtcttcga
      901 ccgccatcgt ccggccttgg tgaaccacct tcgcgtgcta gccgcaacgc cgcagacccc
      961 ggcaatccct ttcgtcacgg caacggcccc cccctgcgtc gatcaagacg gcgctcgcag
     1021 aagcgctgcg gcgcgtggcc accgcgccgg aatgggcgct tgtgggggcc gcgatgatgc
     1081 tgttgggtgt tctgccgccg caccgagccg actatcaggt gccatgccgc tatgcggttg
     1141 aggcgagcgc gcttggttac gcatcctgca gtgacacggc gaattgctta aatcttcggc
     1201 aaaaaatgcc gccggattgg ggtgccaccc taaactgagc catgaaaatt aggcgcactg
     1261 ttctgtaacg agaacagaag tgtcgagcgg gaagaaaatg ggtcagaaga agacgggact
     1321 gtccagagat tgggggatga cgacgagagc gatacgatct tccggtacgt tgccgacggt
     1381 gggatcgcgg aagcggtggg ttttagggct ggttggaacg gggatcgatg gccgatcgat
     1441 cagcgtgaac atcatggagt tcgatcggtc ctattgtctt catgataatg ataacctggg
     1501 tctgacattg gccgacggga agctgctgct ggcgctcgtt cagcagatca ccgctggagg
     1561 gcgacaggtg ttcgcggcgg tggcgaaggc cgacactggt aacgaagccg ccaattctcg
     1621 attggtttca catcgtcatg cggatgcagc acgcaacgct gcctgccagc ggattgtcaa
     1681 cggacggtca tgcatgcatt
//
LOCUS       DATAVD010000153         1694 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1317067, whole genome shotgun sequence.
ACCESSION   DATAVD010000153 DATAVD010000000
VERSION     DATAVD010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1317067"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..537
                     /locus_tag="VHX39_02755"
     CDS             <1..537
                     /locus_tag="VHX39_02755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990075.1"
                     /translation="KRTKGRLLSLSTWRDEKSVVRWRTHGEHHVVQGKGRFQVFEDYH
                     LRVGQVTSDTAPPNEASMEPIRSDETEIGTAKFCTITEVLPTEKAIAAATLYQADANA
                     SGLLDHESFESITSPGKLLVLASWRDGSSAADWCAKRIISVSGIRHRQVRVIRDYGMF
                     DRREAPQFYPDVAAAERK"
     gene            629..>1694
                     /locus_tag="VHX39_02760"
     CDS             629..>1694
                     /locus_tag="VHX39_02760"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990076.1"
                     /translation="MSVNTTTRTRDWSAFAQSLTLAAMSLGFALVQLDVTVVNTALSS
                     IGRSLGGDVTELQWVVSCYTTAFAAFILTAGALGDRLGAKRIFMSGFAIFTTASVGCA
                     LAPGAIWLIAARTIQGVGAAILVPNSLALLNHAYPDATQRGRAVGIWAGGASIALTAG
                     PLAGGGLIALIGWRSIFLVNLPIGLIGLWLTRRYATETMPSPGRQLDLRGQIAAVAAL
                     ALLAATLIEAGAFGWDRGWMAGGFAAFAIAAVTFVVLEARAPQPMLPLSLFSNQLFSV
                     SSVIGLFANAAFYGIIFVLSLYFQQVDHLSPFNTGLAFLPMMAVVLPANLTAPRIAEH
                     IGAPPTIAIGATIAALGCAGL"
BASE COUNT          304 a          509 c          523 g          358 t
ORIGIN      
        1 aagcggacca aaggacgcct gctttcattg tcgacctggc gcgacgaaaa atcggtcgtg
       61 cggtggcgca cccatggtga gcatcatgtc gttcagggca agggccgttt ccaggtcttt
      121 gaggattatc atcttcgggt cggccaggtc acgtcggata ccgcgccgcc gaacgaagcc
      181 tcgatggagc cgatacgttc cgatgaaacc gagatcggca ctgcaaagtt ctgcaccatc
      241 accgaggtgt tgccaacgga aaaggcgata gccgccgcaa cactatatca ggctgacgcg
      301 aacgcctctg ggctgctcga ccatgagtcg ttcgagagca taacaagccc agggaagttg
      361 ctcgttctgg cgtcgtggcg ggacggttcg agtgcagcgg attggtgtgc gaaacgcatc
      421 ataagcgtga gcgggatcag acatcgccag gtccgcgtga tccgcgacta cggcatgttc
      481 gaccgtcgcg aagcaccgca attctatccg gatgtcgccg cggctgagcg gaaataggcc
      541 gcctcttctg acaaccaggc cacgagatgg cgctgcggcg cgtgacgtcg aacgtgccac
      601 ctcgtgccac gcaaggtttc tccgtgccat gtccgttaac acaacgaccc gaacacgaga
      661 ttggtcggca tttgcgcagt cactgacgct tgccgcgatg agcctgggct tcgctctggt
      721 tcaactcgac gtcaccgttg tcaacaccgc gttgagcagc ataggacgtt cgttgggtgg
      781 tgatgtcacc gaactgcaat gggtggtcag ctgctacacc accgcctttg cggcgtttat
      841 cctgaccgcc ggcgcacttg gtgaccgact gggcgcgaag cggatcttca tgtcgggctt
      901 tgcgattttc acgactgcgt cggtcggttg cgcgctcgca cccggcgcca tatggctgat
      961 tgcagccagg acgatccagg gcgttggcgc agccatattg gtcccgaatt ccctggcctt
     1021 gctcaaccat gcctacccgg acgcaaccca acgcggtcga gcggtcggga tctgggctgg
     1081 cggagcgagc attgcactca ccgctggtcc gttggcgggt ggtggtctga tcgctctgat
     1141 cggttggcgg agcatttttc tcgttaacct gccgatcggt ctgatcggcc tttggctgac
     1201 gcgacgatac gcgaccgaga cgatgccatc gcctggccgg caactcgacc tgaggggcca
     1261 gattgccgcc gtcgcagcgc tggcgttgct agcggcaacg ctgatcgaag ccggggcgtt
     1321 cggctgggat cgaggctgga tggccggcgg ttttgccgca tttgcgatcg cggcggtgac
     1381 gttcgtggtc ctggaagcgc gcgctcctca acccatgctg ccgctgtcgc tgttcagcaa
     1441 tcaattgttc tcggtatcct cggtcattgg attattcgcg aacgccgcgt tttacggaat
     1501 catcttcgta ctcagtctgt atttccaaca agtcgaccat ttatcgccgt tcaacaccgg
     1561 tctggctttc ttgccgatga tggccgtcgt gctgcctgcg aacctgacgg cgcctcgcat
     1621 cgccgagcac attggcgcgc caccaaccat cgccatcgga gcaacgatcg cagccctggg
     1681 ctgcgccgga ttga
//
LOCUS       DATAVD010000154         5222 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2247580, whole genome shotgun sequence.
ACCESSION   DATAVD010000154 DATAVD010000000
VERSION     DATAVD010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5222
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2247580"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(286..1467)
                     /locus_tag="VHX39_02765"
     CDS             complement(286..1467)
                     /locus_tag="VHX39_02765"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX3990077.1"
                     /translation="MTRIAIIGAGIGGLSAAVSLRQAGFQVDVYEQAPELTEVGGGIN
                     MGPNACRVLFRLGLGPALDHVGVRPLTGHQRRWDDGRTLQKAPLNPRCEQLYGAPHMT
                     FHRRDLLGVIASGMTAEQVHLGHRFAGFTDHGDHVEAWFENGARITTDVLVGADGIHS
                     TIRETLFGEAAPVFAGCVAYRGLVPAERIADLGLEIGNQSWLGPGGHFVHYFVSSGRL
                     LNFVGWTEHDVWNREDWTDRATIARARAAFTGWHPQIDRIISAAETAFIWALFDRDPQ
                     PNWSVGRVTLLGDACHPMYPFMGQGAAQAIEDGAALAASLRASDDVAKALRRYERARQ
                     PRVARLQAMSRANKIRFHMPDGPDQQARDAGWAQASDRAPDALRWLYEYDPAVLEQEA
                     E"
     gene            complement(1520..2347)
                     /locus_tag="VHX39_02770"
     CDS             complement(1520..2347)
                     /locus_tag="VHX39_02770"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3990078.1"
                     /translation="MPVIDVQVHPFDRNHPGRPWASPSHGLDSATGEEMVAAMTNVGV
                     DGAIMVSSFSAYEYNPSYALEVYNTYPDKFRVVTPVDATDPTIDDVVAKWAATPGARG
                     IRIRMRDGLPMDADHPGLNRAFAAAARHGLPVNLLCWGILDKGLPHIRQHPDTVIVID
                     HLGMLQPAKPPVPADVWADLPKLLDLAQYKNVRVKVSGACTMSHQPFPYDDIWEPVLR
                     VIDAFGLDRCMWGTDWTRTIGMLTYEQGVAPFRNTKRLSESDKAALMGGTLQKVYKW"
     gene            complement(2656..2922)
                     /locus_tag="VHX39_02775"
     CDS             complement(2656..2922)
                     /locus_tag="VHX39_02775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990079.1"
                     /translation="MMLYWATVFLVAFLWTFGIGLQTKAVARSNYLPAALMGVFLCGV
                     QIFIVRAAVYQDPWLFFAIGGIAYALGNISSIWVFDRMARPAPA"
     gene            3150..3578
                     /gene="msrB"
                     /locus_tag="VHX39_02780"
     CDS             3150..3578
                     /gene="msrB"
                     /locus_tag="VHX39_02780"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEX3990080.1"
                     /translation="MALFGRSGTQTQETYNVEHTDEEWKQLLNPQQFQVLRKHGTERA
                     GTSQLNEEKRPGTFICAGCAQALFDAKTKFESGTGWPSFWDPLDGAVGTTEDRSFFMT
                     RVEVHCANCGGHLGHVFPDGPRPTGQRYCMNGAAMKFKPA"
     gene            complement(3585..4928)
                     /locus_tag="VHX39_02785"
     CDS             complement(3585..4928)
                     /locus_tag="VHX39_02785"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX3990081.1"
                     /translation="MELTRYLGRFVADLSANHLPEDAVRVARMGFIDSIGTMMVGRNE
                     ASVRIMTEVLAPADGPATLTFSTRKAPAPEAAWINGTAAHALDYDDVSLRGHPSTVLV
                     PAILAEAETLDASGSDMITAYVAGYEVWAELALRETGLLHEKGWHPTGLYGAPAAAAA
                     CAKLRKLSSEKTAIAIALGASQASGLMANFGTMTKPFHAGKAAHAGIMAARLAAAGFT
                     ANTDALEHKRGFLHAISPEGREDRTSEPRAGREWAILTHGLGIKKYPMCYATHRSIDC
                     LLDLLAASPIQEGDVKKINVSISDNASQVLRNNQPDTGLAAKFSIQFAMASGIIAKRV
                     GLRELTDGFVRRPDVQALMRRVEVGTTTEYDPEMPGAAPYDMVTVELIDGRTLSGEPV
                     ARATGHPTRPLTDAQLYEKFADCLDAGESAIPADVLFKRLAEIQSISARELTALS"
     gene            complement(5090..5221)
                     /locus_tag="VHX39_02790"
     CDS             complement(5090..5221)
                     /locus_tag="VHX39_02790"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX3990082.1"
                     /translation="MVTGTTGGVGAYQKPPLWMKPGDTIEVEISNIGVLRNPIVAED"
BASE COUNT          980 a         1667 c         1587 g          988 t
ORIGIN      
        1 gtagcgtacc gtatcgcgac acgattcgct gtccctgcgc gcgttcgaat cgcgcaatga
       61 tttcgtttaa cgggtcggcg atgccgccgc cggccaggat ctggagttca gcgtccggca
      121 tagcaacagc gcgacgcgac aaagcgcttt tcagaggaac tcgccatggt tgcctccctc
      181 gtgaggtcgg gacatcatcc gccgcatact ggctctgacc acgcgcaagt tgcgcgattt
      241 ccgtaatctc cgcaaaccaa tgatgacgac ccggagagtg tcatcttact cagcttcctg
      301 ttccagtacg gcgggatcgt actcatacag ccaccgcagc gcatcgggcg cgcggtcgct
      361 tgcctgggcc catccggcgt cacgagcctg ttggtccggt ccatccggca tatgaaaccg
      421 gatcttgttg gcgcgcgaca tcgcctgcaa ccgggcaact ctgggctgcc gcgcccgctc
      481 gtaccgccgc agcgccttgg cgacatcgtc actggcgcga agcgacgccg ccagagcggc
      541 cccgtcctcg atcgcctgcg cggcgccctg acccatgaac ggatacatcg ggtggcacgc
      601 gtcgcccagc agtgtgaccc gcccaaccga ccaattgggc tgcggatcgc ggtcgaacaa
      661 agcccagatg aaagcggtct ccgcggccga aataattcga tcgatttgcg gatgccaacc
      721 ggtgaaagcc gctcgcgcac gggcgatcgt tgcgcggtcg gtccagtcct cgcggttcca
      781 tacgtcatgc tcggtccaac cgacgaaatt cagcagccgg ccggaggaca cgaagtagtg
      841 gacaaaatga ccgcctggtc cgagccagga ttggttgccg atctccaggc ccagatcagc
      901 gatgcgctcc gcggggacca atccgcgata ggcgacgcag ccggcgaaga ccggcgctgc
      961 ctcgccgaac agggtttccc ggattgtgga gtggatgcca tcggcgccca ccagtacatc
     1021 ggtggtgatg cgcgcgccgt tctcgaacca agcttcgacg tggtcaccgt ggtccgtgaa
     1081 ccccgcaaac cgatgcccga gatgcacctg ctcggcggtc atgcccgacg cgatcacacc
     1141 cagcaggtcg cggcgatgga acgtcatatg tggcgcgccg taaagttgtt cgcaccgcgg
     1201 attgaggggc gccttctgca aagtccggcc gtcgtcccag cggcgctgat ggccagtgag
     1261 cgggcgcaca cctacgtgat caagcgcggg acccaggcca aggcgaaaca ggacgcgaca
     1321 ggcattcggc cccatgttga tgccgccgcc gacctcggtc agttccgggg cctgttcgta
     1381 aacgtccacc tggaatccgg cctgtcgcaa tgacaccgcg gcgctgaggc cgccgatccc
     1441 ggcaccgata atggcaatgc gcgtcatgat cccggggtat tccgtaagag tgtcgcgcgg
     1501 ccggatcgcc gcggtcgcgt caccacttgt agactttctg caacgtgcct cccatgaggg
     1561 ctgccttgtc gctctcggac aggcgtttgg tattgcggaa cggtgcgacg ccctgctcat
     1621 aggtcagcat gccgatcgtc cgcgtccagt cggtgcccca catgcaacga tcgagcccga
     1681 aggcatcgat aacccgcagc accggctccc agatgtcatc gtatgggaat ggttggtgcg
     1741 acatcgtgca ggccccgctg accttcaccc tgacgttctt gtactgcgcc agatccagca
     1801 gcttcggcag atcagcccag acgtctgccg gaaccggagg cttcgccggt tgcagcatgc
     1861 cgaggtggtc gatcacgatg accgtgtcgg ggtgctgccg gatgtgcggc agacctttgt
     1921 ccaggatgcc ccagcacagc aaattgaccg gcaggccgtg ccgcgcggcg gcggcgaaag
     1981 cgcggttcag accgggatgg tcggcatcca tcggcaggcc gtcgcgcatg cggatgcgaa
     2041 tgccgcgcgc ccccggtgtc gccgcccatt ttgccacgac atcgtcaatc gttggatcgg
     2101 tcgcgtcgac cggcgtcacg acccgaaatt tgtccgggta ggtgttgtag acttcgagcg
     2161 cgtagctcgg attgtattca taagcgctga acgacgacac catgatcgcg ccgtcaacgc
     2221 cgacattggt cattgcggcg accatttcct cgcccgtggc agagtcgagg ccgtgtgagg
     2281 gactggccca tggccggcca gggtgattgc gatcgaacgg atgaacctga acgtcgatga
     2341 ccggcatggc cgtctcccag cttgttcggc ccattctccg tcatcgtgat cggattgcac
     2401 agagtgatgg gcgccgtaac aggcgcagcg cgaaccggcg ttcaagatat tggcgaaggc
     2461 ctgtgatgcc gcttcggaat tacgtccggt gggcgagcac gctcggcgtg cgttcagtac
     2521 tgggcggtgc cgggatggat gccatcgacc gtgttgcggt gacgtttgag atgcagcgcc
     2581 agccgcctga gtgggccgaa cgaccgatgt atcgccggcc tggttacgtc cgccacacac
     2641 cggacggaaa tcgcttcacg cgggcgccgg ccgcgccatc cggtcgaaca cccagatcga
     2701 cgaaatgttt ccgagcgcat aggcgatgcc gccgatcgcg aagaacagcc atgggtcctg
     2761 atagaccgct gcccgaacga tgaagatttg cacaccgcac agaaacactc ccatcagcgc
     2821 cgcgggcaaa tagttactgc gggcgacagc tttggtttgc agaccgatgc caaacgtcca
     2881 aagaaatgcg accaggaata ctgtggccca atacagcatc atgactgccc ctccggcgcc
     2941 accaaattca gaaattttgt agtgtgcata tgaaactcct gccactggac taaatctgta
     3001 ccgcacatgg caggtgcgtt gccgcattgc gagggtccat cggcgatttt tcctgccatc
     3061 ggacggaatc gtgccacccc ggtgctgcca ggctggttaa ctcagccgca gccgcctaca
     3121 ttccccagcg aaatccacgg agacgcccca tggcactgtt cggacgcagc ggcacccaga
     3181 cccaggaaac ctataacgtc gagcacaccg acgaagagtg gaaacaactg ctcaacccgc
     3241 agcagttcca ggtgctgcgc aagcatggca ccgagcgcgc cggcaccagt cagctcaatg
     3301 aggaaaaacg cccaggcacc ttcatttgcg ccggctgtgc gcaggcgctg ttcgatgcca
     3361 aaacgaaatt cgagagtggc accggctggc caagcttctg ggacccgctc gacggcgccg
     3421 tcggcaccac cgaagatcgc agcttcttca tgacccgcgt cgaagtgcat tgcgccaatt
     3481 gcggcggtca tctcggccac gtgttccctg acgggccgcg ccccaccggg cagcgttact
     3541 gcatgaacgg tgccgcgatg aagttcaaac cggcctgatc ggtattacga cagcgccgtt
     3601 agctcccgcg cggagatcga ctggatctcc gccagccgct tgaacagcac gtcggccggg
     3661 atggcggact ctccggcatc cagacaatcg gcgaacttct cgtagagctg tgcgtcggtc
     3721 agcggccggg tcggatggcc cgtggcacgc gccaccggct caccggagag ggtgcggcca
     3781 tcaatcagtt cgacggttac catgtcatac ggcgccgcac ccggcatctc cggatcgtat
     3841 tcggtggtgg tcccgacctc gacccgacgc atcagagcct gcacgtcggg gcgtcgcaca
     3901 aagccatcgg tcagttcacg cagtccgacg cgtttggcaa tgatcccgct ggccatggca
     3961 aactggatgc tgaatttcgc cgcaagcccg gtatccggtt ggttgttgcg cagcacctgg
     4021 gaggcattat cgctgatgct gacgttgatc tttttcacat cgccttcctg gatcggactt
     4081 gcggcgagca gatcgagcag gcaatcgatc gatcgatgcg tggcataaca catcggatac
     4141 ttcttgatcc ccaggccatg cgtcaggata gcccattctc tgccggctct tggttcgctg
     4201 gtacggtcct cgcgcccttc cggtgatatg gcatgcagga acccgcgctt atgttccagt
     4261 gcatcagtgt tggcggtgaa acctgccgca gcgaggcgcg cggccatgat cccggcatgt
     4321 gctgctttac cggcatgaaa cggtttcgtc atcgtgccga aattcgccat caggccggac
     4381 gcctgggatg cacccagcgc gatggcgatc gcggttttct ctgagctcag cttgcgtagc
     4441 tttgcacagg ctgccgccgc ggccggagca ccataaagcc cggtcggatg ccaacccttt
     4501 tcatgcaaaa gcccggtttc acgcagcgcc agttcagccc agacctcata gccggcgacg
     4561 taggcggtga tcatgtcgga accggacgca tcgagcgtct ccgcctcggc caggatcgcc
     4621 ggcaccagaa cggtcgacgg atggccccgt aacgaaacgt cgtcgtaatc aagtgcatgc
     4681 gctgcagtgc cattgatcca ggccgcctcg ggtgccggtg ccttgcgcgt gctgaacgtc
     4741 aatgtcgccg gtccgtcggc gggagcgaga acctcggtca tgatccgcac gctggcttcg
     4801 ttgcggccca ccatcatcgt tccgatgctg tcgatgaagc ccatgcgcgc cacacggacc
     4861 gcatcctccg gcaggtggtt cgcggagaga tcggcaacga accgacccag atatctggtg
     4921 agttccatac gtgggttctc ctgttatctg tctttgattg gttgcctttg agtcgtggtc
     4981 agcgcttttc gttgggtgtc aacttcgaca gctgtccgcc gattgtctcg accagaatcg
     5041 tctcatagtg ttgcacgatg gattccgccg gccgttggct gacgatggtt tagtcttccg
     5101 cgacgatcgg attgcgcaac acaccgatat tgctgatctc cacctcgatc gtgtcgccag
     5161 gcttcatcca cagcggcggc ttctgatagg caccgacccc gcccgtcgtt ccggtaacga
     5221 ta
//
LOCUS       DATAVD010000155         7239 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_14651, whole genome shotgun sequence.
ACCESSION   DATAVD010000155 DATAVD010000000
VERSION     DATAVD010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7239
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14651"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            263..2119
                     /gene="mnmG"
                     /locus_tag="VHX39_02795"
     CDS             263..2119
                     /gene="mnmG"
                     /locus_tag="VHX39_02795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019091536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEX3990083.1"
                     /translation="MSNQFDVIVIGGGHAGSEAAAAAARVGARTLLLTHSLGTVGEMS
                     CNPSIGGIGKGHLVREIDALDGLMGRAADAAGIHFKLLNRSKGPAVRGPRAQADRSLY
                     RRAVRSLLEDTANLSLRAAAAEDLETDRDGRITAVICSGGQRIGCRAVVLTTGTFLRG
                     VIHIGDHQTPAGRMGEAPSVGLAQTLSRLGLPLGRLKTGTPPRLDRRSIDWAGLRADP
                     GDDRPQPFSTMTSRLLNRQIECRVTGTTEATHTVIRENIHRSAVYSGQIAGRGPRYCP
                     SIEDKIVRFSDKDRHNVFLEPEGLDDPTVYPNGISTSFPEDVQRAILKTIPGLEHARM
                     VRPGYAVEYDYVDPRALTRGLELRAMPGLFLAGQINGTTGYEEAAAQGLLAGINAARL
                     SGGQNPVWLDRTESYLGVMVDDLTTQGVAEPYRMFTSRAEFRLSLRADNADLRLTGKG
                     IIWGCVSRARQVAFNAHHAALQAAMERAHQDGLPAVAMDRLGLVPATDGRWRSVLALA
                     GNDNISWASLCEAFPWLATLPERTAEQLRTDARYAGYLHRQHAEVRLSRREDSLDLGG
                     ISFEDIGGLSTEIREKLTRIRPESLGVAARIQGMTPAALASIAAFARKRTAA"
     gene            2187..4769
                     /gene="mutS"
                     /locus_tag="VHX39_02800"
     CDS             2187..4769
                     /gene="mutS"
                     /locus_tag="VHX39_02800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEX3990084.1"
                     /translation="MAQWFACKAEQPDALLIFRMGDFYVLFFADAEAAAAALDIALSH
                     RGEHAGTPIPMCGVPHHASEIYLSRLIRRGFRVAIVEQMEDPKARVGKLPIKREVVRV
                     ITPGTITEESLLEAGQPNLLMSLTWDRDGLGAAWVDVSTGLFETTALATSELPALLGR
                     LEPVEILAPQSLDLGEWAANRSPETVPSTPLIARRRLAETFGTASLDAFGTFTDGEAV
                     AATMAVDYIRSTQSGALPRLGRPEPRGQSGALLMDAATRASLEILKSRDGGTQHTLFS
                     VVQRTLTAAGARLLANWLSAPLTDRITITARQDAWSWCVANPEATDRLRVVLRTAPDM
                     ARALSRLSLNRGTPRDLAAIRDGLNAAFGGAKVLEGPLPAALADARSAIPCSSALAEE
                     LARALGDPVPARLEDGGAIRTGFDGELDAHRTLRDESRQVIAKLQLDFAQRFGVASLK
                     IKHHAQLGYIIEAPSVAVEKLRDFPELTLRQGMANGARFTTPELSELDQRIREAAEKA
                     TARERLVFAHLVRGVLAQADELAACAEAMAHLDATQSAAKLAQNGTWVRPILTDTNEF
                     RIESGRHPVVESALASHSAFVPNRCDLSPDQRVMLLTGPNMAGKSTFLRQNALFIVLA
                     QAGLPLPAETAVLGIVDRLFSRVGASDDLARGRSTFMVEMTETAAILHQAGPKSLVVV
                     DEIGRGTSTLDGLAIAWAVLEALHSATRCRTIFATHFHELAELADRLPRLKPHTMRVK
                     EWKGTVVFLHEVAEGAAGRSWGVHVAELAGVPAQVVRRAASLMAAMEKHGGPLAKSAS
                     LQALPLFAATAEQEEEAPAFDELAPLRDALNEINPDNMSPKQALDALYRLKTLVAGCA
                     DRAT"
     gene            4783..>7239
                     /locus_tag="VHX39_02805"
     CDS             4783..>7239
                     /locus_tag="VHX39_02805"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HEX3990085.1"
                     /translation="MLTPIPLPRAPEAAASLLSDALAGIAEESGTISREAAVGAFRRH
                     LARIQSYVQHAFEHEQITGLQAARLLGALIDGVVAALFEHSTTQTDLGFVENLSVAAT
                     GGYGRGVLAPFSDIDLLFLTAEDPTPETLRVVEYMLYFLWDLGLKVGHATRSIGDCLI
                     EGGKDTTIRTALLDARFLTGNNTLFGDFHRRFRAACKEAGAADYIAAKQAERALRHRR
                     YGESPFVVEPNVKEGRGGLRDLQTLYWIARYVFDTQTMGELADLGGILTQQEARHGRR
                     AWEFLWTVRFHLHYVAGRAEERLTFDLQPVVGARMGYTRHGRQDGVERFMRHYFLTAR
                     EIARLTRILEPAILRSALGPPALEAETDNALLSAGFVLAEGQLLPIAGRDFDAEPIQM
                     LRILQIARDRGLELHPLAIRSFIQNERRAVSLRGDLKAAAIFMDLLCGKEPDRHRPGG
                     PHPDGARWLGILNETGFFGRYLPDWARIVGQMQFDTYHIFTVDEHTIEAVRVLNTLER
                     GELSEVAPIASELVDNVQSRRSLYLAMLLHDIAKGRGGDHSALGAEVALEVGPALGMT
                     DEETETVSWLVLHHLLMSATAFKRDIDDPKTILDLADTIQSPERLRLLLILTVADMRA
                     VSSKVWNGWKATLLRELYSRVAEVLAGGLATTERDVRVARAKQAVATLLTDWSPEEIE
                     HFSELGYAGYWLSFDPETHARHARLVRDAEHRKSPLTVDTQPLPARAVTEVTVYCADY
                     AGLFSKISGALAVAGASIVDARIHTMTNGMALDTFWIQDTAGGTFDAPHRLARLSVLI
                     EQALSGRLRLSTEIRRVSKTL"
BASE COUNT         1334 a         2140 c         2353 g         1412 t
ORIGIN      
        1 gtctcgggcc gtggtgatgg gcttgctgat ccgcgtttcc agcttgcccg gtcggccggt
       61 agcatgcatg accagtgcct cttccgcgga aatccgtgcg gtgcgtgtat cgatcgcgcc
      121 atcagccatg gccgaatctc ccctattgct tattgatgcc ctgtcggggc tgcggtccca
      181 tcatggcctt gccgcgcatt cgacgaaaga ggcgacggta aggcatggcg agagggcgcg
      241 cttctatggc agaaaggtgg tcatgagcaa ccagttcgac gtgattgtta ttggcggggg
      301 gcacgctgga agcgaggcgg cagcggcggc cgcgcgtgtc ggtgcccgca cgctgctatt
      361 gacccactca ctgggcactg tcggcgagat gtcgtgcaat ccgtccatcg gcgggatcgg
      421 caaaggccac ctggtgcggg aaatcgacgc attggatggg ctgatgggac gggccgccga
      481 tgccgcgggt atccacttca agctgctgaa ccgcagcaag ggccccgcgg tgcgtggccc
      541 gcgtgcgcag gctgatcgct cgctttaccg tcgagcggta cgctcactgc tggaagatac
      601 cgcgaacctc agtttgcggg cggctgcggc cgaagacctt gagacagatc gcgacgggcg
      661 cattacggct gtcatttgtt cggggggaca acggatcggt tgccgcgcag tggtgctgac
      721 gaccggaacg ttcctccgcg gggtcatcca tattggcgac caccagacgc cagccggccg
      781 catgggggag gctccgtcgg tcggattggc gcaaacattg agccggttgg gattgccgct
      841 tggtcgtctc aagaccggga ccccgccacg attggaccga aggagcatcg actgggcggg
      901 cttgcgtgcc gacccgggtg atgatcggcc gcagccgttc agcacgatga cgtcccgcct
      961 gttgaaccgg cagatcgaat gccgcgtaac cggcacaacc gaggcaacgc atacggttat
     1021 acgagagaac atccaccggt cggccgttta ctcgggccag atcgcgggac ggggaccgcg
     1081 gtattgtccg tctatcgagg acaagattgt ccgcttctcc gataaagacc gccataatgt
     1141 cttcctggag ccggaaggcc tggacgatcc gaccgtgtat ccgaacggca tatccaccag
     1201 cttcccggaa gacgtccagc gggcaatcct gaagacgatt ccagggctgg aacatgctcg
     1261 catggtccgt ccaggctatg ccgtcgaata tgattacgtt gatccccgag cattgacccg
     1321 agggcttgaa ctgcgggcga tgccggggtt gttcctggcc ggccagatca acggtacgac
     1381 aggatatgag gaagccgccg cgcaaggtct gctggcgggg atcaacgctg cgcgtttgtc
     1441 cggcgggcag aacccggtgt ggctcgaccg gacggagtcc tacctgggcg tcatggttga
     1501 cgatttgacg acccaagggg tcgcggaacc gtaccggatg tttacctcgc gcgccgaatt
     1561 ccggctcagt ctgagggcgg ataacgccga tctgcggttg acaggcaagg ggatcatctg
     1621 gggatgtgtc agtcgggcac ggcaggttgc gttcaacgca caccatgcgg ccctgcaagc
     1681 ggcaatggag cgggcgcacc aggacggttt gccggctgtt gcgatggatc ggctggggct
     1741 tgttccggcc accgatgggc gctggcgatc ggtgctggct cttgcgggca atgacaatat
     1801 ctcctgggcg tccctgtgtg aggcgttccc ttggctcgct acattaccgg agcgaacggc
     1861 ggagcaactt cgtaccgatg cgcgctatgc cggctatctg catcggcagc acgcagaggt
     1921 gaggttgagt cggcgggagg atagcctcga cttgggaggt atttcgttcg aagatatcgg
     1981 cgggctgtcc acggaaatac gcgagaagct gacgcgcatc cgtccggagt cactaggtgt
     2041 ggcggcccgt atccagggca tgacaccagc ggccctggcg tcaatcgccg cctttgctcg
     2101 caaacgcacg gcggcgtagc gaaacggtgg acggcgtcag cccctccccc tcttccatgc
     2161 cgtcggccgc cggggcgacg cccgcgatgg cccaatggtt cgcatgcaag gccgaacagc
     2221 ctgacgcact gcttatcttc cgaatgggcg atttctatgt gctgtttttt gcggacgccg
     2281 aggctgcggc ggcggcgctc gatatcgcgt tgtcgcatcg tggagagcat gccggcacac
     2341 ccatcccgat gtgtggcgtt ccacaccacg cgtcggaaat ctatctctcc cgcctgatcc
     2401 ggcggggctt tcgggtggcc atcgtcgagc agatggagga tccgaaggcc cgtgtcggaa
     2461 agctgcctat caagcgcgag gtcgtccggg tcatcacacc cggcacgatc acggaagaat
     2521 ccctgctgga agccggacag cctaacctgt tgatgagctt gacctgggac agggacggac
     2581 ttggcgccgc ctgggtcgat gtctccaccg gcctcttcga aaccactgca ctggcgacat
     2641 cggagcttcc cgcgctgcta ggacgcttgg agccggtcga gattttggcg ccccagtcac
     2701 tcgaccttgg cgagtgggca gccaaccgtt cgcctgagac agtgccgtcg acaccgctca
     2761 tcgcacgacg ccggttggcg gaaacgtttg gcaccgccag cctggatgcg ttcggcacat
     2821 tcaccgatgg cgaggcggtc gccgctacca tggcggtgga ttatatccga agcacccagt
     2881 cgggcgccct gcctcgcctt ggccgtccgg aaccgcgggg tcagtcaggc gcgcttctga
     2941 tggatgcggc gacgcgcgcg agtctggaaa tactgaaatc acgggacggc ggtacccagc
     3001 acacgctatt ttcggtggtg caacgtactc taaccgcggc gggcgcgaga ttgctagcaa
     3061 attggctctc cgcaccactg acggatcgga taaccatcac tgcgcgccag gacgcgtggt
     3121 catggtgcgt cgcaaaccca gaggcgaccg atcggctacg tgtggtcttg cgaacagccc
     3181 cggacatggc gagagcgctg agccgtttgt cgttgaaccg cgggaccccg cgtgacctcg
     3241 ccgccattcg ggatgggctg aacgcggcgt ttggcggggc caaagttctc gaaggccccc
     3301 ttccggctgc tcttgcggac gcacggtccg cgatcccctg cagctctgct ctggctgaag
     3361 aactggcccg agcactgggc gatccggtgc cggctcgtct cgaagatggt ggcgcgatcc
     3421 gaactggttt cgatggggaa ctcgacgcgc atcggacctt gcgcgatgaa agccggcagg
     3481 tcattgccaa gctgcaactc gatttcgccc agcgcttcgg cgtggccagt ctcaagatca
     3541 agcatcacgc acaactcggc tacatcatcg aggcaccgtc cgtagcggtg gagaaattgc
     3601 gtgattttcc agaacttacg ctgcggcagg gaatggcgaa tggcgcacgc ttcaccacgc
     3661 cggaactgtc cgaactggac cagcggatcc gggaagcggc ggagaaagcg acggcgcgag
     3721 agcgtctggt gtttgcccat ttggttcggg gtgtccttgc acaagcggac gaattggcgg
     3781 cctgcgcgga agcgatggcc catctggatg caacacaatc ggccgcaaaa ctggcgcaga
     3841 atggcacttg ggtgcggcct atcctgaccg ataccaatga atttcgtatc gaatccggac
     3901 gacatccggt ggtggaaagt gcgctcgcca gccattcagc attcgtgccg aaccgctgcg
     3961 atctttcccc cgatcagcgg gtcatgttgc tgactggtcc gaacatggcc ggaaaatcta
     4021 cctttcttcg ccagaacgca ctgttcatcg tgctggcgca agccggattg ccgctgcccg
     4081 ccgagacggc tgtgctgggc atcgtcgatc ggcttttcag ccgggtgggg gcgtcggatg
     4141 atctcgcacg cggccgttcc accttcatgg tggagatgac ggaaacagcg gcgatcctgc
     4201 atcaagcggg accgaaatcg cttgtcgttg tcgacgaaat cggacgcggt acctcaaccc
     4261 tggatggatt ggccatcgcc tgggcggtct tggaggcttt gcactccgcg acacggtgcc
     4321 gcaccatttt tgccacacat ttccacgaac ttgcggagct ggcggatcgc ctgcctcggc
     4381 tgaagccgca tacgatgcgg gtcaaggaat ggaagggtac tgtagtgttc ctgcacgaag
     4441 tcgccgaggg tgccgctgga cgttcctggg gcgtacatgt cgcggaactc gccggggtcc
     4501 cggcacaagt agttcgccgg gcagcgtcat tgatggcagc catggaaaag catggcggac
     4561 cactcgccaa gtcggcgtcg ttgcaggcat tgcccctgtt cgccgcgacg gcggagcagg
     4621 aggaggaggc gccagccttc gacgaactcg cgccgttgcg ggatgctttg aatgagataa
     4681 atcccgacaa tatgtcgccc aaacaagcac tcgacgcctt atatcgcctt aagacgcttg
     4741 tggcgggttg cgcggacagg gccacatagt accatctata cgatgttgac ccccattccc
     4801 ttgccgcgtg cccccgaagc cgcggcctca ctgctctcgg atgcccttgc cggcatagcc
     4861 gaggagagcg gcacaatttc ccgagaagcc gccgtcggcg ctttccggcg gcatttggcc
     4921 cgtatccaat cctatgtgca gcacgctttc gagcacgagc aaatcaccgg cctgcaggcc
     4981 gctcggcttc taggcgcgtt gatcgacggt gtggtcgcgg cgctgttcga acatagtacg
     5041 acccaaaccg acctggggtt cgtcgagaac ctgagtgtcg ccgcgacggg cggttatggt
     5101 cgcggtgtgc tggcgccttt cagcgatatc gacctgctat tcctgaccgc cgaggatccg
     5161 acaccggaga cactgcgtgt cgtggaatac atgttgtatt tcctgtggga tctggggctg
     5221 aaggtcggac atgcgacgcg ctcgatcggg gactgtctga tcgagggggg caaggatacg
     5281 acaatccgga cggcgctgct cgatgcgaga tttcttactg gtaacaacac gctgtttggt
     5341 gactttcatc gccgcttccg agccgcctgt aaggaagcgg gtgcggccga ctacatcgcc
     5401 gcgaagcagg ccgaacgcgc gttgcgtcac cggcgctacg gcgagagccc gttcgtcgtc
     5461 gaaccgaatg taaaggaagg ccgaggcggc ctgcgcgatc tgcaaaccct gtattggatc
     5521 gcacgttacg tgttcgatac ccagacgatg ggcgaattag ccgaccttgg tggcatcctg
     5581 acacaacagg aagcgcggca tggcagacgg gcgtgggagt ttctgtggac tgtcaggttt
     5641 cacctccatt acgtggcagg ccgagccgag gaacggctga cgtttgattt gcagccggtc
     5701 gtcggggcgc ggatgggata cacgcgccat ggccgccagg acggcgtgga gcgattcatg
     5761 cgccactatt ttctgacagc ccgggaaatc gcgcggctta ccagaatcct ggagccggcg
     5821 atcctgcgat cagcgctcgg tccacccgca ctcgaggcgg aaaccgacaa cgcgctgctg
     5881 tctgccggct tcgtcctggc agaaggtcaa ctgctgccga ttgcgggacg tgatttcgac
     5941 gccgagccga tccagatgtt gcgtattctg caaatcgcac gtgatcgggg cctggaactt
     6001 cacccccttg ccatacgctc gttcattcag aacgaacgac gggcggtatc gcttcgcggg
     6061 gatttgaagg cagccgcgat cttcatggat ttgttgtgtg gcaaggagcc ggatcgacat
     6121 cggcctgggg ggccgcatcc agacggcgcg cgatggcttg gtatcctcaa cgagacaggt
     6181 ttttttggcc gctacctgcc tgactgggcc cgcatcgtcg gccaaatgca gttcgatacc
     6241 taccatattt tcactgtcga tgagcacacg atcgaggcgg tgcgcgtact taacacattg
     6301 gaacgaggcg aactctccga ggtggctccg atcgcttcgg aactcgttga caatgtccaa
     6361 tcacggcgtt cgttgtatct cgcgatgctg ctgcacgaca ttgccaaagg ccgtggggga
     6421 gaccactccg cgcttggtgc ggaggtcgcc ttggaagtcg ggccggccct gggcatgaca
     6481 gacgaggaaa ccgaaacagt ctcctggctg gttcttcacc acttgttgat gagtgctacg
     6541 gccttcaagc gcgacatcga cgacccgaaa acgatcttgg acctggccga cacgatccaa
     6601 tcgcccgagc gcttgcgatt gctgttgatt ctgacggtcg ccgacatgcg cgcggtttcg
     6661 agcaaagtct ggaatggctg gaaggcgacg cttctgcggg agttgtattc gcgtgtcgcg
     6721 gaggtgttgg ccggcggtct tgccacgacc gaacgcgacg tgcgcgtcgc acgggcaaag
     6781 caggcagtcg ccacattgct gactgactgg agcccggaag agatcgagca tttctcggaa
     6841 cttggctatg cgggatattg gctgtcgttt gatccggaaa cccatgcccg ccatgcaaga
     6901 ctggttcgcg acgccgagca tcgcaaatct ccgctgactg tcgatacaca gccattgccc
     6961 gcgcgggccg ttacggaagt gacggtttat tgcgctgact atgcagggct gttcagcaag
     7021 atttccggag cgctggccgt tgcgggagcc tcgatcgtag atgcgcgcat ccatacgatg
     7081 acgaacggca tggcgctgga tacattctgg attcaggaca ccgcaggcgg gaccttcgat
     7141 gcaccgcaca gattggcccg cctgtcagtc ctgatcgagc aggctctgtc cggccggttg
     7201 cggctttcga cggaaattcg ccgggtttca aagactctg
//
LOCUS       DATAVD010000156         1727 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_387472, whole genome shotgun sequence.
ACCESSION   DATAVD010000156 DATAVD010000000
VERSION     DATAVD010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_387472"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..452)
                     /locus_tag="VHX39_02810"
     CDS             complement(<1..452)
                     /locus_tag="VHX39_02810"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462610.1"
                     /note="catalyzes the formation of ribose 5-phosphate and
                     xylulose 5-phosphate from sedoheptulose 7-phosphate and
                     glyceraldehyde 3-phosphate; can transfer ketol groups
                     between several groups; in Escherichia coli there are two
                     tkt genes, tktA expressed during exponential growth and
                     the tktB during stationary phase; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX3990086.1"
                     /translation="MADVIRALAIDAVEAANSGHPGLPMGMADAATVLWTRFHKFDAG
                     APHWPDRDRFVLSAGHGSMLLYSLLHLTGYAGMGIEQIKRFRQLHSPAAGHPEVGESP
                     GIETTTGPLGQGLATSVGMALAERILAARFGKSLVDHRTWVIASDGDL"
     gene            763..1452
                     /locus_tag="VHX39_02815"
     CDS             763..1452
                     /locus_tag="VHX39_02815"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEX3990087.1"
                     /translation="MTDIGLFDAMYSARALRRLKPDPVPEEMITKLLDAAIRAPSAGN
                     AQNWIFMVVRDVAQRRRLGAVYRKASDEVAEIYAARGRPAHLTDAQYRSMMAGGAYLW
                     EHMQDAPVLLVPCLRKRDMPPREALPDAVAARYEAHLLHQEKIRGSSIYPAVQNIILA
                     CRALGLGTLITTNHILYEDEVRAILGLPDDVFTFAFMPIGFPLGKYGPLTRRPVSEVA
                     FADRWGTNWPG"
     gene            1534..>1727
                     /locus_tag="VHX39_02820"
     CDS             1534..>1727
                     /locus_tag="VHX39_02820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990088.1"
                     /translation="MSTTFAVGELTIHRVIESEGPLFDPLTFFPTLTADLLAENRSWM
                     QPTYVDPVSGHLVLCVQSYVV"
BASE COUNT          306 a          534 c          556 g          331 t
ORIGIN      
        1 atcaggtcgc cgtcgctggc gatgacccag gtgcggtgat caaccagcga tttgccaaat
       61 cgtgcggcga gaattcgttc cgcgagcgcc ataccgaccg aggtcgccaa cccctggccg
      121 agcggccctg tcgtggtctc gatgcctggg ctttcgccca cttcgggatg gcccgccgcg
      181 ggcgagtgca attgccgaaa ccgcttgatc tgctcgatgc ccatgccggc ataaccggtg
      241 aggtgcagca acgaatacag caacatcgag ccgtggccgg cggacagcac gaagcggtca
      301 cggtcgggcc aatgcggcgc gccggcgtcg aatttgtgaa accgcgtcca caacaccgtg
      361 gcagcgtcgg ccatgcccat cggcaggccg gggtggcccg agttcgccgc ttccacggca
      421 tcgatcgcca atgcgcgaat gacatcggcc atacgccggt tctcggtgat cgggcgagcc
      481 aggatctcgg cctgcagcgc aagcgcgctg gtgggtgccg aggcttcgat tgttgccgcc
      541 atgacgtctc cttcgacatt tgccgctata ggcggaggtg aggcgaaccg gcaagtggcg
      601 cgcccccgct ccgcgcactt ccgggcatcc ggcccgttgg caaaaagggc ggtattgcgc
      661 tggagttccc tcccgcgtgg tggatggcgt tggcgttgcc gtgttatgcc tgctgtccag
      721 gcacgagaac cgggcattca tccgcaaagg gggcacgata ccatgacgga catcggactg
      781 ttcgatgcga tgtacagtgc tcgcgctttg cggcgattga aacccgaccc ggtgcccgag
      841 gaaatgatca ccaagctgct cgatgcggca atcagagcgc catcggccgg aaacgcgcag
      901 aattggatct tcatggtcgt ccgggatgtg gcgcagcgcc gccgcctggg tgccgtgtat
      961 cgcaaggcct cggatgaggt agccgaaatt tatgccgcac gcggccggcc cgcgcatctg
     1021 accgacgcgc aataccgaag catgatggcg ggcggagcct atctctggga acacatgcag
     1081 gacgcgcccg tgctgctggt gccgtgcctg aggaaacgcg acatgccgcc gcgcgaggca
     1141 ctaccagacg cggtagcggc acgttacgaa gctcatcttc tgcatcagga gaaaattcgc
     1201 ggctcgagca tttatccggc ggtacagaac atcattttgg cctgtcgggc actgggcctt
     1261 ggcacgctga tcacgaccaa tcatatcctg tatgaggatg aagtgcgcgc gatcctgggt
     1321 ctgccggacg acgtgtttac gtttgctttc atgcccattg gatttccgct cggcaaatac
     1381 ggcccgttga cgcgccggcc ggtgtccgag gtcgcgttcg ccgatcgctg gggcaccaac
     1441 tggccggggt gagccgacgg tttatcgccg gctcggcttt ttgtcgggtc cgtggcaaca
     1501 tcggtgcaga tccaacctcg aaggacgtcc cgcatgagca caacattcgc cgtcggcgaa
     1561 ctgaccatcc atcgcgtcat cgagtccgaa ggtccgctgt tcgatccgtt gaccttcttt
     1621 ccgacactga ccgcggacct gttggcggag aaccggtcct ggatgcagcc gacctacgtc
     1681 gatccggtca gcggccattt ggtgctgtgt gtccagtctt atgtcgt
//
LOCUS       DATAVD010000157         8729 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1504297, whole genome shotgun sequence.
ACCESSION   DATAVD010000157 DATAVD010000000
VERSION     DATAVD010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8729
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1504297"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..970
                     /locus_tag="VHX39_02825"
     CDS             <1..970
                     /locus_tag="VHX39_02825"
                     /inference="COORDINATES: protein motif:HMM:NF013348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase"
                     /protein_id="HEX3990089.1"
                     /translation="LAARAREARYDVLLRACVAEGIPHLLLGHQRSDQAETVMMRALS
                     GSASRGLAGMPARLELRHVRLLRPLLDVAPGHLREYLAERAVSWIDDPSNHNPVALRS
                     RLRTAQGDFQGTGEGIHAIARAARSAGNQRSDQDLVIAQTLGERATIRPEGFAVLTPG
                     PIDPWSLAALLRCIAGAGHAPPIDRVAVLARSLRPATLGGVRIVCAGRLGAGWLLVRE
                     SRAMQDPVQVCCGVGWDGRFRLVGGPPDAFAHDGPSNALTIGALGADAARFRNQDRLP
                     ALVLHGLPALRLGETVVAVPHVGLGDPRWRVLFDPRNRAAGAPFSS"
     gene            1173..3101
                     /gene="ftsH"
                     /locus_tag="VHX39_02830"
     CDS             1173..3101
                     /gene="ftsH"
                     /locus_tag="VHX39_02830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEX3990090.1"
                     /translation="MSNFGRNLALWVIIALLLVVLFNLFQPGVTHTNATQMAYSDFLT
                     EVNTGRVRDVVIQGRTISGQESDGHTFQTYTPEDPTLVQRLTDKGVRVIAKPEDNDVN
                     PLLHLLLSWFPMLLLIGVWVFFMRQMQSGGGRAMGFGKSRARMLTEKQGRVTFDDVAG
                     IDEAKQELQEIVEFLKDPQKFQRLGGKIPKGVLLVGPPGTGKTLLARAIAGEANVPFF
                     TISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGAGLGGGNDERE
                     QTLNQMLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVPNPDVVGREKI
                     IRVHMRKVPLASDVDPKTIARGTPGFSGADLANLVNEAALLAARLGKRVVAMAEFEHA
                     KDKVMMGTERRSLVMSEAEKRMTAYHEAGHALCAMHEPECDPVHKATIIPRGRALGLV
                     MSLPEGDRYSKSKSKLTSELTMAMGGRAAEEIIFGPDKVSNGAAGDIKMATDQARRMI
                     TEWGMSDKLGMIAYGDNSQEVFLGHSVTQSKNVSEETARQIDGEIKTVISRAYDKARR
                     ILSENIEELHRLATGLLEHETLSGDELRTVLRGEKVIRTVVDEPAPESRRASVPTSGR
                     PATPPPPAGGAAPAPQPG"
     gene            complement(3254..3892)
                     /locus_tag="VHX39_02835"
     CDS             complement(3254..3892)
                     /locus_tag="VHX39_02835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990091.1"
                     /translation="MNFDALLTLVSTSVVKTGLLPDTRVYGRPERLQFKEDTIAKGTC
                     KDSACKVYNVTTAAAGGDSFLSYICDYKTGEINYQVLGPEANFCFTTTMNGCTFGIGS
                     PTSDGSVLVSHANMAVPSVPTAQTKALGPGLVPPGSQADRQLAVAKALHGPGASYLTP
                     DMYRHDHANVTLVGGRTTTGAWKFYYQRWAMAGSGNVRLLSFNEVITTKAEF"
     gene            complement(4084..5451)
                     /locus_tag="VHX39_02840"
     CDS             complement(4084..5451)
                     /locus_tag="VHX39_02840"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase family protein"
                     /protein_id="HEX3990092.1"
                     /translation="MTGMLTLDDLKAEADAGKIDTVVVAMADMAGQLVGKRFHAQYFL
                     ESGWAETHACDYLLANDIDMEPVPGYAAASWNRGYGDFVLRPDLATLRRIPWLEGTAL
                     VLADVLDHQHNPVPHSPRAILKRQLCRLAALNIRAFFASELEFYLFDESHATIAARDF
                     RAPQTIGRYIEDYHILQTTKEEPVMRAVRNGLQGAGIPVENSKGEWGPGQAEINVRYA
                     DALEMADRHVVIKNAVKEIAYAQDKAVTFMAKWRYDLAGSSAHIHQSLWDVAGAVPLF
                     ADASREHGMSALMRHYLAGQLAHAGEICYFLAPYINSYKRFQSGTFAPTRAVWSVDNR
                     TAGFRLCGDGTNAIRVECRIGGADLNPYLAFAALIAAGLAGIKDGAELEPAFGGDAYR
                     GRRLREIPATLRAATAALRRSKMLRAAMGDAVIDHYVHAAEWEQFEYDRRITDWELRR
                     GFERY"
     gene            5603..6322
                     /locus_tag="VHX39_02845"
     CDS             5603..6322
                     /locus_tag="VHX39_02845"
                     /inference="COORDINATES: protein motif:HMM:NF019378.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1614 domain-containing protein"
                     /protein_id="HEX3990093.1"
                     /translation="MGNLHYLPLPLPLFSILAAIFLVLVVLVQIGILRYAYIHLGLRP
                     GTVMLLLLGSLLGSYFNIPVVDLPGQQILAHREIYYFGMRYAVPVVVNWPGTILAVNV
                     GGALIPAIVSLYLVIKNELWGLGLVATACVTLVCHEVAHPVQGLGIALPVFVPALTAG
                     IVALVLSRRHAAPLAYIGGCIGTLVGADLLNLGAIRRMGAPVASIGGAGTFDGIFLAG
                     ILAVLIASLSGTREVQAQSRW"
     gene            complement(6328..7533)
                     /locus_tag="VHX39_02850"
     CDS             complement(6328..7533)
                     /locus_tag="VHX39_02850"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016717 - oxidoreductase activity, acting
                     on paired donors, with oxidation of a pair of donors
                     resulting in the reduction of molecular oxygen to two
                     molecules of water [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HEX3990094.1"
                     /translation="MGQCLAPSNLDPFPSWHRTAGKSHLRQRCGCASQHLTSGPIVGS
                     LPDRARPETGATSLISPIPDPDAALMQPAATWRTLVAPYLVPSSARALLQLINTALPF
                     LAVMTGMLIALHYGVLAGMALFPVGAFLLVRLFIIQHDCGHGSFFKSSWANGLLGRAL
                     SLATLTPYAFWRRDHAMHHATTGNLDRRGSGDVTVLTMAEYQALPLFRRIGYRLYRHP
                     LVMFGVGPAWLILWCLRVPRGSPWHRWRDWLSIVGTDAALAALITTLVLVLGPLPVLL
                     GWLPVMLLSATIGVWLFYIQHQFESAYWEPRPQWDFQTSALCGSSFYDLPPVLHWMTG
                     NIGFHHIHHLACRIPNYRLRECHEANPALQTAPRLTLLESLSCARLALWDPERRKLVP
                     FRAANSRHQ"
     gene            complement(7551..7757)
                     /locus_tag="VHX39_02855"
     CDS             complement(7551..7757)
                     /locus_tag="VHX39_02855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007398099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX3990095.1"
                     /translation="MSNGTVKWFNPQKGYGFIQPDDGSKDVFVHISAVERAGKTTLPE
                     GQKVSFEIEEGQRGKTSAVNLELR"
     gene            8172..>8729
                     /locus_tag="VHX39_02860"
     CDS             8172..>8729
                     /locus_tag="VHX39_02860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990096.1"
                     /translation="MPVHNETLRRLERLHVRAWPASETARIDGWLWRWSGGGSQRANS
                     VSTIDFIGNDMADALDQLESRYRARNSPSQVHTFDLSQPDGLPALLTSRGYAMGETTL
                     TMLATAPVSGQPSGPTADVGVANDPGAEWLDLYIAAITANRRAVNRQILRRIPDPRAF
                     FSVRSGGRIISIALGVVDGGHAIAEC"
BASE COUNT         1662 a         2658 c         2736 g         1673 t
ORIGIN      
        1 gttggcggca cgcgcgcgcg aggcccgcta tgacgtgttg ctccgagcct gcgtcgccga
       61 ggggattccg catctgctgc tcggtcatca gcgcagcgac caggctgaga ccgtaatgat
      121 gcgggcattg tccggcagcg cctctcgcgg cctcgccggc atgccggcac gattggagtt
      181 gcgccatgtc cggttgcttc ggccgttgct cgatgtcgct ccgggacact tgcgagaata
      241 cctcgctgag cgtgcggtca gctggatcga tgacccatcg aaccacaatc cggttgcgct
      301 gcgttcgcgt ttgcggactg cccagggcga tttccaggga acgggcgagg ggattcacgc
      361 catcgctcgt gccgcgcggt cagccgggaa ccagcggtcg gatcaagacc tggtcattgc
      421 ccaaaccctt ggcgagcggg cgacgatccg gcccgagggc ttcgccgtgc tgacgccggg
      481 tccgatcgat ccctggtcac tggcggcctt gttgcgctgc attgccggtg cgggccatgc
      541 gccgccgatt gatcgcgtcg cggtgctggc ccgctcactg cggccggcca ctttgggcgg
      601 cgtgcggatc gtgtgtgccg gacgcctcgg tgcgggatgg ctgctggtca gggaatcgcg
      661 ggcgatgcag gacccggttc aagtgtgctg cggcgttggt tgggacggac gcttccggct
      721 ggtcggcggc ccacccgatg cttttgccca tgacggcccg tccaacgcgt tgaccattgg
      781 cgcacttggc gcggacgccg cacggtttcg caaccaggac agactgcctg cgttggtctt
      841 gcatggctta cctgcgttgc gattgggtga gacggtggtt gcggttccgc acgttggcct
      901 cggcgacccg cggtggcgcg tactgttcga ccctcgcaat cgtgcagcag gcgccccatt
      961 ttcatcctga tcctatactg tgttaggatc cccatggcgg tttcggccaa gggagtgggt
     1021 ctgcataagg atcgcgacgt gaacgcaatg gcgatttcca aaaggcgggg gctgtgccgg
     1081 ccgtccgtgc gtgcttatac taacgttaat ctggttgcct ggcggtccgg ctgtgtgcga
     1141 ccctctttca tcgtgatcac ggatgagccc gcatgagtaa ttttggccgc aatctggcgc
     1201 tttgggtaat aatcgccctg ctactggtcg tgctgttcaa tctgtttcag ccaggtgtca
     1261 cgcataccaa cgcgacccag atggcgtact cggacttcct gaccgaagtg aacaccggcc
     1321 gcgtgcgcga cgtggtgatc cagggccgca ccatttccgg ccaggagagt gatggccata
     1381 cgttccagac ctacaccccg gaagacccga cactggtgca acggctgacc gacaaaggtg
     1441 tgcgcgtcat cgccaagcct gaggacaacg atgtcaaccc gctgctgcat ctgctgctca
     1501 gctggttccc gatgctgctg ctgatcggtg tctgggtgtt cttcatgcgg caaatgcagt
     1561 cgggcggcgg gcgcgccatg ggattcggca agtcccgcgc ccgaatgctg accgagaagc
     1621 agggccgcgt caccttcgac gacgtcgccg gcatcgacga ggcgaagcag gaactgcagg
     1681 agattgtcga attcctgaag gatccgcaga aattccagcg gctcggcggc aagatcccca
     1741 aaggcgttct gctggtgggt ccgcccggca ccggtaagac gttgctcgcg cgcgccatcg
     1801 cgggtgaggc gaacgtgccg ttcttcacca tttccggctc cgacttcgtc gagatgttcg
     1861 tgggtgtcgg cgcctcccgc gtgcgcgaca tgttcgagca gggcaagaag aacgcgccct
     1921 gcatcatctt catcgacgaa atcgacgcag tcggccgcca tcgcggcgcc ggactgggcg
     1981 gtggcaatga cgagcgtgag cagaccctga accagatgct cgtcgagatg gatggtttcg
     2041 agtcgaacga aggcgtgatc ctgattgccg cgaccaaccg gccggacgtg ttggaccccg
     2101 cgctgcttcg gcccggccgg ttcgaccgtc aggtggtggt gccgaatccg gacgtggtcg
     2161 gccgcgagaa gatcatccgc gtccacatgc gcaaggtacc gttggcgtcg gatgtcgatc
     2221 cgaagacgat cgctcgcggc acgccgggct tctcgggtgc cgatctggcc aacctggtga
     2281 acgaggcggc actgctcgct gcccgtttgg gcaagcgcgt tgtcgcaatg gcggagttcg
     2341 agcacgccaa ggacaaggtg atgatgggca ccgagcgccg ctcgctggtg atgagcgagg
     2401 ccgagaagcg gatgaccgcc tatcacgaag cgggccatgc gctgtgcgcg atgcatgaac
     2461 cggaatgcga tccggtgcac aaggcgacca tcatcccgcg tggccgcgct ctgggtctgg
     2521 tcatgagcct gccggaaggc gaccgctatt ccaagtcgaa gtccaagctg acctcggaac
     2581 tgaccatggc aatgggcgga cgggccgctg aggaaatcat ctttggcccg gacaaggtct
     2641 ccaacggtgc ggcgggcgac atcaagatgg cgaccgatca ggcccggcgg atgatcactg
     2701 aatggggcat gagcgataag ctcggcatga tcgcttatgg cgacaacagc caggaggtgt
     2761 tcctcggtca ctcggtgacc cagagcaaga atgtctccga ggaaaccgcg cggcagatcg
     2821 atggcgaaat caagaccgtg atcagccggg cctacgacaa ggcccgccgg atcctgagcg
     2881 agaacatcga ggaactgcac cggctcgcca ccgggctact ggagcatgag acgctgagcg
     2941 gcgacgaatt gcgcaccgtg ctgcggggcg agaaggtgat ccggaccgtg gtagatgaac
     3001 cggcccccga aagccggcgc gcgtcagtgc cgacgtctgg caggcctgcc acaccgccgc
     3061 cgcctgccgg aggggcagcg ccggcaccgc agccgggcta acactctgaa acgttgaacc
     3121 gtgcccacgt catccccggg cttgtcccgg ggaccgatcg cggcacggtg ctgatgttgt
     3181 ccccgggaca agcccggaaa tgacggagcc gcgactcacg gtccactgat tgtggacact
     3241 ggcgcgggtg ccttcagaac tcagccttgg tcgtgatgac ctcattgaag ctgagcaacc
     3301 ggacattccc cgaccctgcc atggcccaac gctgatagta gaatttccac gccccggtgg
     3361 tagtacggcc gccaaccagt gtcacgttgg catgatcatg ccgatacata tccggcgtca
     3421 gatagctggc accgggaccg tgcaaggcct tcgcgacggc cagctgacga tccgcctgac
     3481 tgccgggcgg caccaggcca ggcccgagag ctttggtttg ggccgttgga accgaaggca
     3541 ccgccatatt ggcatgcgag accagcacgc tgccgtcaga cgttggcgac ccgatgccga
     3601 aagtgcagcc gttcatagtg gtcgtgaaac aaaaattcgc ttccggaccg agcacctgat
     3661 aattgatctc cccggttttg taatcgcaga tgtaggacag gaaactatcg cctccggccg
     3721 ccgccgttgt tacgttatag accttgcaag ccgagtcctt gcaggttcct ttggcaatcg
     3781 tgtcctcttt gaattgcagg cgctccgggc ggccgtagac tctggtgtcc ggtaacaaac
     3841 cggttttcac gaccgacgtt gataccaagg tcaacaatgc atcgaaattc atggcccacg
     3901 ccctccatga tttctgggcg tgccactaat tcattgctat tccattaaca gattcggaaa
     3961 ggattgcccg caaccgattg gcgaatgcaa cgacagggcg cctcgtgtga gccggccggg
     4021 ctttgttacg aaaaccggta gaatacctgc cgccagactt attgcagcgg acggcggcac
     4081 tcttcaatag cgctcaaatc cgcgccggag ttcccaatcc gtgatcctgc ggtcgtattc
     4141 gaactgctcc cactccgctg cgtgcacgta atggtcgatc acggcgtccc ccatggccgc
     4201 gcgcaacatc ttcgagcgcc gcagcgcagc ggttgccgca cgcaaggtag ctggaatttc
     4261 gcgcaaacgc ctgccgcgat aagcgtcgcc gccaaaggcc ggctccagct ccgcgccatc
     4321 tttgatgccg gcgagaccgg cagcgatcaa cgcggcaaac gccaggtatg gattaagatc
     4381 cgccccgcca atccggcatt cgacgcgaat tgcatttgtt ccgtccccgc acagtcggaa
     4441 tccggcggta cgattatcga cgctccatac cgcccgggtt ggcgcgaacg taccgctctg
     4501 gaaacgctta taggagttga tgtaaggcgc cagaaaataa caaatctcgc cggcatgagc
     4561 gagttgaccc gcaagataat gccgcatcag cgccgacata ccatgttcgc gcgaagcatc
     4621 ggcaaataac ggcaccgcgc cggcaacatc ccatagcgac tgatggatat gcgctgacga
     4681 tcccgccaga tcgtaccgcc acttggccat aaatgtcacc gccttatcct gggcgtatgc
     4741 gatctccttt actgcatttt tgatgaccac atgacggtcc gccatctcca gtgcgtcagc
     4801 gtaacggacg ttgatttccg cctgacccgg cccccattcg cctttggagt tctcgaccgg
     4861 aattccggcg ccctgcaatc cattgcggac cgcgcgcatc accggctctt ctttggtggt
     4921 ctggaggatg tggtagtctt cgatgtaacg gccgatggtc tgtggcgcac gaaagtcccg
     4981 ggcagcgatc gtcgcgtggc tttcgtcgaa cagatagaac tcgagttcgg acgcgaagaa
     5041 ggcccgaata ttcaacgcgg caaggcgaca gagctgacgt ttcaggatcg cccggggtga
     5101 gtgcggtact ggattgtgct ggtggtcgag cacatcggcc aaaaccaggg ccgtgccctc
     5161 cagccatgga atgcgccgca acgtggccag atccggccgc agaacaaagt cgccatatcc
     5221 gcgattccaa ctggcggcgg cgtaacccgg caccggctcc atatcgatat cgttggccag
     5281 caggtagtcg caggcatgcg tttccgccca accactttcg agaaaatact gcgcgtggaa
     5341 ccgcttgccg accagctgac cggccatgtc ggccatcgcg acgacgacgg tatcgatctt
     5401 gccagcgtca gcctcggcct tcaggtcgtc cagggtgagc atgccagtca tttcgagcat
     5461 catcgccggt ggcaccgagt cgcggcaatt cagcgcctgg tcgagcctcg gagcgactgg
     5521 cggtcggcag ccggcacgtt gcggcaggat ttcggccgtg ccagtttcgc gatgaaatcg
     5581 cccggatggt cggagctagc ttatgggcaa cctgcattac ctgccgttgc cgctgccgtt
     5641 gttctcgatc ctggcagcga tttttctcgt acttgtcgtg ctggtccaaa tcgggatcct
     5701 gcgatatgcc tatattcacc tcgggttgcg acccggtacc gtgatgcttt tgttgttggg
     5761 atctttgttg ggcagttact tcaatattcc agtcgtcgat ctgccgggcc agcagatact
     5821 cgcccaccgc gagatatact attttggcat gcgctatgcg gtaccggtcg tggtcaattg
     5881 gcccggcacc attctcgcgg tgaatgtggg tggtgcgctg attcctgcga tcgtgtcgct
     5941 ttacctggtg atcaagaacg agttgtgggg gcttggcctg gttgcgaccg catgcgttac
     6001 gcttgtgtgc cacgaggttg cgcatccggt gcagggtctt ggaattgccc ttcccgtatt
     6061 cgtgccggca ttgacggcgg gaattgtggc gctggtgctg tcgcgccggc acgcggcccc
     6121 gctggcttat atcggcggct gcatagggac cctcgttggc gccgatctgc tcaatctggg
     6181 cgcaatacga cgcatgggcg caccggtggc ctcgatcggc ggggccggca cgttcgacgg
     6241 gatatttttg gccggtatcc ttgcggtgct gatcgcaagc ctgtcaggca cgcgcgaggt
     6301 gcaagcccag agccggtggt gatgcggcta ttggtgtcgg gaatttgctg cccggaacgg
     6361 caccagtttg cggcgctccg ggtcccacag cgcaagccgc gcgcagctca ggctttcaag
     6421 caaggtcagg cgaggtgcag tctgcaacgc cgggttcgcc tcgtggcact ctcgcagacg
     6481 atagttcgga atccggcagg caagatggtg aatgtgatgg aacccgatat tgccggtcat
     6541 ccagtgtagc acgggtggca aatcgtagaa tgaagaaccg cacagcgcgg acgtctgaaa
     6601 atcccattgt ggacggggtt cccaatacgc tgactcgaat tgatgttgaa tgtaaaacag
     6661 ccagacgccg atggtcgcag agagcagcat gaccggcagc cagccgagca gcaccggtaa
     6721 ggggccgagt accagcacca gcgtggtaat cagtgcggcc agcgcggcgt ccgtgccaac
     6781 aatgctcaac cagtcccgcc accggtgcca ggggctgccc cgcggcaccc gcaggcacca
     6841 caggatgagc caggccggac cgaccccaaa catcaccagt ggatgccggt aaagccggta
     6901 gccgatacgc cgaaacagcg gcaacgcctg atactctgcc atggtcagca cagttacatc
     6961 gccgctgccg cgccgatcga gattgcctgt ggtggcatga tgcatggcat gatcgcgacg
     7021 ccagaacgcg tagggcgtca gcgtcgcaag gctcagcgcc cggccaagca ggccgtttgc
     7081 ccacgaagat ttgaagaacg atccgtggcc gcagtcgtgc tgaatgatga acagccgaac
     7141 cagcagaaag gcgccgaccg gaaacaacgc catgccagcc agcacaccgt aatgcagcgc
     7201 gatcagcatt cccgtcatca ccgccaggaa cggcagcgca gtattgatca gttgcagcaa
     7261 tgcgcgggcc gaagacggca ccagataagg tgccaccagg gtacgccacg tcgcggcagg
     7321 ttgcatcagc gcggcatcag ggtcgggaat gggtgatatc agcgacgtgg ctccggtctc
     7381 cggccgcgcg cggtcgggaa gcgacccgac gatcggaccg gatgtcaggt gttgcgaggc
     7441 gcagccgcaa cgttgccgta aatgactttt gccggcagtg cgatgccatg agggaaacgg
     7501 atcgaggttc gacggggcaa ggcactgccc catcgccgac ttcagcaggg ttaccgaagc
     7561 tcgagattaa ccgccgaggt cttgccgcgt tgtccctctt caatttcgaa ggacaccttt
     7621 tggccttccg gcagggttgt tttacccgcg cgctcgaccg ccgagatgtg cacgaagacg
     7681 tccttcgagc catcgtccgg ctgaatgaag ccgtaacctt tttgtgggtt gaaccattta
     7741 actgtaccgt ttgacattga ctgctccgtt aacgtcgttc tgccacacga cattgcgtga
     7801 caggtctaac cgcggcgatg ggatagggaa ccgggttcga cgcctgaagc gaaacgaaat
     7861 acgggcctga ctcaaacaac agggcgacgg gccgtcatat aaggggcgca ctcgtcagat
     7921 gcaaggtcaa tcgttgggcc agttcagcgc ccgcctggcc cggcaaatct taatatctgc
     7981 ctggcggatt gcccccatcc tacgaatcag cgtcctgcga acaagggctc ggccacccag
     8041 catcttgcaa atcagccgat cacaaatcag gctctcacag gtcggtttgc gctctgcgat
     8101 caaccgcaac ctgccaggcg ctgaagctga gctgcgaaga gtggggccat tgcaaagtgg
     8161 atgatcgtcc gatgcctgta cataacgaaa ccttgcgccg cctggaacgg ttgcacgtcc
     8221 gtgcctggcc ggcatcggaa accgcgcgga tcgacggttg gctttggcgg tggtctggtg
     8281 gcggttcgca acgcgccaac tccgtatcga ccattgattt catcggaaac gatatggcag
     8341 acgcgctcga ccagcttgaa tcccgttatc gcgccaggaa ttcccccagt caggtgcaca
     8401 cattcgacct cagtcagcca gacgggcttc cggcactgct gaccagccga ggctatgcca
     8461 tgggcgaaac gactttgacc atgttggcca ccgcgcctgt ctccggccaa ccatccgggc
     8521 cgacagccga tgtcggtgtc gcgaacgatc cgggtgcgga atggcttgat ctctatatcg
     8581 cggcgatcac cgcaaaccgc cgcgccgtca accggcaaat cctgcggcgc attcccgacc
     8641 ccagggcgtt tttctcggtc cgctccggcg ggcgaatcat ttccatcgcg ttaggtgtcg
     8701 tcgacggcgg ccacgcaatc gccgagtgc
//
LOCUS       DATAVD010000158         2449 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_387754, whole genome shotgun sequence.
ACCESSION   DATAVD010000158 DATAVD010000000
VERSION     DATAVD010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_387754"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..436)
                     /locus_tag="VHX39_02865"
     CDS             complement(<1..436)
                     /locus_tag="VHX39_02865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990097.1"
                     /translation="MEYVCDAPNNRTWFRLLTEGEAIAESQDMRHAVEKHYRRERERA
                     IDSFHPLTSVFIEQDIGKEDHIRRAMPLFLTLRDEDGKALVTAMLPAKGKGAQGLGVP
                     SGGCIIVGPANADPYPGHADAIAALADHFGITLDRASCYPYRR"
     gene            536..2188
                     /locus_tag="VHX39_02870"
     CDS             536..2188
                     /locus_tag="VHX39_02870"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3990098.1"
                     /translation="MATDADTFDYVIVGSGAAGSVLCARLTEDPNVTVCVLECGPPDR
                     HPYIHIPAGFIKMLFNPTYTWQFHTEPGEGINGRSIPTTQGRTLGGSSSINGMIYNRG
                     QREDFDQWAQRGNRGWGYVDILPYFKRGERRLGVGDERIHGRGGNLPVTDNDWDHPAM
                     AAFIEGAQELGIPRCVDYNSGDNQMGVGYFQRLIHKGYRHSAARVFLHPARATGRLDV
                     RTDARAAQVLFDGTRATGVRYVNDKDGSVRHEVFARKEVIVSSGTANTAKLLQMSGVG
                     PAWLLRDLGIPVIVDLPVGENFRDHFSTRIVARVKNVRTMNEMSHGMGLIGQIARWVM
                     GKPSILAVSPSILHWFWKTEDTMRQPDIQGVFSPASYKQGFVGLLDDYPGMTCGVWQH
                     RPESIGYVRARGTDPFVDPMIQPNYLKDPMDQRVLVKGMHWARKLLHTQALAPYFESD
                     TLPGPDVHTDEEWLDYARQYGSTAYHLVGTARMGSVTDKTSVVDDQLRVHGLQGLRVV
                     DASIMPSMPSANTYSSTMMIAEKASDMIRGRSPLAPVEGVAA"
     gene            2254..>2449
                     /locus_tag="VHX39_02875"
     CDS             2254..>2449
                     /locus_tag="VHX39_02875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016453731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX3990099.1"
                     /translation="MAGFKSTEKYIATRDLEVAVNAAVTLERPLLVKGEPGTGKTVLA
                     HEVAAALNRPLIEWHIKSTTK"
BASE COUNT          445 a          728 c          814 g          462 t
ORIGIN      
        1 atcggcgata tgggtagcaa ctggcgcgat cgagggtaat cccgaaatga tccgccaggg
       61 ctgcgattgc gtcggcatgt ccgggatacg ggtcggcgtt ggcgggcccg acgatgatgc
      121 agcccccgct ggggacacca agcccttggg cgcctttgcc tttggccggc agcatggcgg
      181 tgacaagcgc cttcccgtcc tcatcgcgca gcgtcaggaa cagcggcatc gcccgccgta
      241 tgtggtcttc cttgccgatg tcctgctcga tgaacacgct ggtcaaaggg tggaagctgt
      301 cgatggcgcg ttcgcgttcg cgccggtagt gcttctccac cgcgtggcgc atgtcctgtg
      361 actcggcgat cgcctcacct tcggtcagga ggcggaacca ggtccggttg ttcggtgcgt
      421 cgcagacata ctccatgcac agaccttccg gtggcttgga ttgcttccgg ggctcagcat
      481 aaagtggata tggccggcgg gcaaaccacg gtgccgcgtt tgggggatct gaagaatggc
      541 gacggacgcg gatacgttcg attacgtgat cgtgggcagc ggcgcggcgg ggtcggtgct
      601 gtgcgcccgc ctgaccgagg acccgaacgt cacagtctgc gtgctggaat gcgggccgcc
      661 cgaccggcat ccgtacatcc atatcccggc cggcttcatc aagatgctgt tcaacccgac
      721 ctatacctgg cagttccaca ccgaaccggg cgagggcatc aacggccgca gcatccccac
      781 cacccagggc cgcacgctgg gcggatccag ctccatcaac ggcatgatct acaatcgcgg
      841 ccagcgcgag gatttcgacc agtgggcgca gcgcggcaac cgtgggtggg gctatgtcga
      901 tatcctgccc tatttcaagc gtggtgagcg tcgcctgggt gtcggtgatg aacgcatcca
      961 tgggcgcggc ggcaacctgc cggtcaccga taacgactgg gaccatcccg cgatggcggc
     1021 gtttatcgag ggtgcccagg aactggggat tccgcgctgc gtcgattaca acagcggcga
     1081 taaccagatg ggtgtcggct atttccagcg cctgatccac aaaggctatc gccattccgc
     1141 tgctcgggtt tttctgcatc cggcgcgcgc caccggccgg cttgacgtcc ggaccgatgc
     1201 ccgcgccgcc caggttctgt tcgacggcac gcgggcgacc ggcgtgcgct atgttaacga
     1261 caaagatgga tcggtgcggc acgaggtgtt cgcccgtaag gaggtaattg tgtcctccgg
     1321 caccgccaac accgcgaaac tgctgcaaat gtcgggcgtt gggccagcct ggctgctgcg
     1381 cgatctgggt attccggtga tcgtcgacct gccggtgggc gagaatttcc gcgatcattt
     1441 ttcgacgcgc atcgttgccc gggtgaagaa tgtgcgcaca atgaacgaaa tgtcacatgg
     1501 aatggggctg atcgggcaga tcgcccgctg ggtgatggga aagcccagca ttctcgcggt
     1561 ctcgccgtcg atcctgcact ggttctggaa gaccgaggac accatgcggc agcccgacat
     1621 ccagggggtg ttcagtcctg ccagctataa gcagggtttc gtcggcctgc tggacgatta
     1681 ccccggaatg acgtgcgggg tctggcaaca tcggccggaa agcatcggtt atgtcagggc
     1741 gcgtggcacc gatccgtttg tcgatccgat gatccagccg aattatctga aggatccgat
     1801 ggaccagcgg gtgctggtca agggcatgca ctgggctcgc aagctgctgc acacccaggc
     1861 gctggcaccc tatttcgagt ccgacacgct gccgggaccc gatgtccata ccgatgagga
     1921 gtggctggac tacgcccgtc aatacggatc gactgcgtat catttggtcg gcaccgctcg
     1981 gatgggttcc gtaacggaca agacttcggt tgtagacgat cagttgcgcg tccatgggtt
     2041 acaggggctg cgggtggtgg atgcttccat tatgcccagt atgccgtcgg ccaataccta
     2101 cagttcgacg atgatgatcg ccgagaaggc atccgacatg atccgtggcc ggtcgccgct
     2161 ggcgccggtg gagggggtgg cggcctaaac agcgggcttg cggcctgaac cgcttccccc
     2221 gacaatcggc gggacagcgg acgggagcat agcgtggccg gattcaagag taccgaaaaa
     2281 tatatcgcga cacgcgatct ggaggttgcg gtcaacgccg ccgtcaccct ggaacggccg
     2341 ttgctggtga agggcgaacc cggtaccggc aagacggtgc tggcgcatga ggtcgcggcg
     2401 gcgctgaacc ggccgctgat cgagtggcac atcaagtcca ccaccaagg
//
LOCUS       DATAVD010000159        17701 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2434749, whole genome shotgun sequence.
ACCESSION   DATAVD010000159 DATAVD010000000
VERSION     DATAVD010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 17701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17701
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2434749"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="VHX39_02880"
     CDS             <1..219
                     /locus_tag="VHX39_02880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990100.1"
                     /translation="LLVTAGPRDARSRWRKRAAMRNTGITEATDRDVSHDENAPAGQF
                     TSTAFFWEAGTLIAICLALGVLMQLLLG"
     gene            675..764
                     /locus_tag="VHX39_02885"
     CDS             675..764
                     /locus_tag="VHX39_02885"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF011342.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HEX3990101.1"
                     /translation="MILDYVLGAIVSVGLLIYLVYALIRPERF"
     gene            793..2532
                     /gene="kdpA"
                     /locus_tag="VHX39_02890"
     CDS             793..2532
                     /gene="kdpA"
                     /locus_tag="VHX39_02890"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010395161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HEX3990102.1"
                     /translation="MTFNGWLQIALYCVLLILLTKPLGGYMTRVFNGDRTFLSPVLGP
                     LERGLYRISGVDETQEQHWVTYAVAMLAFTFAGFVTLYGLQRLQDMLPFNPQDMSAVS
                     PDLSFNTSVSFVTNTNWQSYVPEQTMSYLTQMAGLTVHNFVSAATGIALAIALIRGFA
                     RRSAQTIGNFWVDLTRCTLYILLPIAIVVGLVFVALGMPQNLNAYAEATTLEGAKQII
                     AQGPVASQEVIKMLGTNGGGFFNANSSHPYENPSAITNLIQILLIFSLGASLTNVFGR
                     MVGSQRQGWAIFAVMGVLFLAGVTTAYWAESAGNPAFAAFNVDQTASALQPGGNMEGK
                     EVRFGIANSALFTTITTDASCGAVNNMHDSLLPIAGMVPIVNIMLGEIIFGGVGSGLY
                     GMMLFVIVAVFVAGLMVGRTPEYLGKKLEAKEVKMAMLGILILPMSMLGFTALAVVLP
                     VGTGAMANAGPHGFTEALYAYVSATGNNGSAFAGLSANVPFWNTTLGLAMFIGRFMMI
                     IPMLAIAGSLVRKKIVPVSTGTFPTDGGLFVGLVVGVIAITGGLIFLPSLALGPVVEN
                     LAMHAGTLYDTGS"
     gene            2537..4651
                     /gene="kdpB"
                     /locus_tag="VHX39_02895"
     CDS             2537..4651
                     /gene="kdpB"
                     /locus_tag="VHX39_02895"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014242081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HEX3990103.1"
                     /translation="MDSRTNRRASQSTMLDPAILFPAIGQSFVKLDPRLMIRNPVMFV
                     VEVVATLTTVIFVRDVLTHGEYLGFTFQIVAWLWVTVLFANLAEAVAEGRGKAQAATL
                     RKARTETVAKRLPAVTATQYQEVAAPDLKQGDIVLVEMGDLIPSDGDVIEGIASVDES
                     AITGESAPVIRESGGDRSAVTGGTRVLSDWIKVRITAAQGSTFLDRMIALVEGAERQK
                     TPNEIALNILLAGLTIIFVFAVVTIPSFATYAGGSLSVIILVALFVALIPTTIGALLS
                     AIGIAGMDRLIRFNVMAMSGRAVEAAGDVDTLLLDKTGTITLGNRQATDFFPLTGVTP
                     DELADAAQLSSLPDETPEGRSIVVLAKETFGIRGREMAPMGARFVPFSAMTRLSGIDF
                     DGSSIRKGAVDALLAWARETTDTAARSGGVTTAVQSSITDAAVREMTAKAEEIGKAGG
                     TPLAVAKDGRLLGTIYLKDIVKGGIRERFAELRRMGIRTVMITGDNPLTAAAIAAEAG
                     VDDFLAQATPEMKLKLIRDEQAQGKLVAMCGDGTNDAPALAQADVGVAMNTGTMAARE
                     AGNMVDLDSDPTKLIEIVEIGKQLLMTRGALTTFSIANDVAKYFAMIPAMFIAFYPQL
                     QALNVMHLSNPRSAILSAIIFNALIIVALIPLALKGIAYRPIGAAALLRRNLLIYGVG
                     GIIVPFVGIKLIDMAVSAIGLA"
     gene            4713..5318
                     /locus_tag="VHX39_02900"
     CDS             4713..5318
                     /locus_tag="VHX39_02900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012813135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit C"
                     /protein_id="HEX3990104.1"
                     /translation="MLQHIRPAIVMIVGMTLITGLAYPLGMTGLAQLLFHHQANGSLI
                     ERDGKVIGSSLIGQNFTSENYFHGRVSALTGTDPKDPTKTVPTPYDASNSGGSNLGPT
                     SKALVDRVKDDAATLQAENPGVPVPADLVTSSASGLDPDITPAGALFQVPRVAKARGL
                     SQDVVRQLVEAHTQARFLGLIGEPHVNVLELNMALDALGKS"
     gene            5915..7075
                     /locus_tag="VHX39_02905"
     CDS             5915..7075
                     /locus_tag="VHX39_02905"
                     /inference="COORDINATES: protein motif:HMM:NF028488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX3990105.1"
                     /translation="MAVDPPTVTQAILSLDGLRALIEALARLGYRVLGPTVRDGAIVY
                     DDVARLADLPTGWTDQQEAGRYRLERRSDNALFGYAVGPQSWRRFLQQPVQRMWQAQR
                     TEDGFTVVAADDTAPRFAFLGVRSCEIHAIAIQDKVFVEGPYVDTDYQRRRRDNFIVA
                     VNCGQAGGTCFCVSMNTGPKVDTGFDLALTELIDADSHRFLIETGSAAGASLLAQLPH
                     DVASPEDIAAAAAVVARTAGSMGRKLDTDGLKQLLQNNPTHPRWDDVASRCLACANCT
                     MVCPTCFCTTVEDHTDLTGQTAERVRRWDSCFTADYSFIHGGSVRPATKSRYRQWITH
                     KLASWIDQFGTSGCVGCGRCMTWCPVGIDITVEAAAIRATSTFPQEADHGGA"
     gene            7062..7526
                     /locus_tag="VHX39_02910"
     CDS             7062..7526
                     /locus_tag="VHX39_02910"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX3990106.1"
                     /translation="MEGLERIVLAHPFFAGFEKELGPVVSGCARNHRFNAGQYLAHEG
                     DPANEFFLIRHGKVALEILSPGQQPTVFSTESEGDIVGTSWLVPPYLWAFDARAVELT
                     RAIGIDARCLRDKCEADPRLGYDLMKRIVPIVVGRLHNTRIQMLDVYGTSRK"
     gene            7523..8356
                     /locus_tag="VHX39_02915"
     CDS             7523..8356
                     /locus_tag="VHX39_02915"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding protein"
                     /protein_id="HEX3990107.1"
                     /translation="MTVVVDPFVPLPYRVGRVRRETRDIRTLELAPVTGERPDYQPGQ
                     FNMLYVFGIGEVAISVSGNAGSGGSYVHTVRDVGVVSGAIAKLGVGATLGVRGPFGTP
                     WPVESAEGSDVVFVAGGLGLAPLRPAIYHVLARREHYGRVVILYGTRSPSDILFRHEV
                     ERWRRRLDLEVLVTVDRADAEWRGDVGVVPRLIARAGFDPHSAVAMVCGPELMMRFTA
                     NALQAAGVEPVRIYLSMERNMKCAIGLCGHCQFGPDFVCKDGPVMRYDRIADIMTVRE
                     I"
     gene            8358..9134
                     /locus_tag="VHX39_02920"
     CDS             8358..9134
                     /locus_tag="VHX39_02920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEX3990108.1"
                     /translation="MAEPRKPRLAVWKFASCDGCQLSLLDCEDELLAVAGAVEIAYFP
                     EASSVMAKGPYDLSLVEGSITTAHDAERIHRIRRQSKFLVTIGACATAGGIQALRNFS
                     DINDFVAAVYASPQYIKTLATSTPISAHIKVDFELNGCPIDKAQLLEVISAFLAGRKP
                     QIGNHTVCIECKLRGNTCVMVMGTPCLGPVTHAGCGAICPSFNRGCYGCFGPRERPNT
                     AALAAEWLKLGATPRDLHRVFRTFNASAEPFRQESDAHGD"
     gene            9124..10413
                     /locus_tag="VHX39_02925"
     CDS             9124..10413
                     /locus_tag="VHX39_02925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe hydrogenase subunit alpha"
                     /protein_id="HEX3990109.1"
                     /translation="MATKTIRVDYIARVEGEGALDLTIRDGRAVSAQLKIFEPPRLFE
                     ALLRGRGFAEAPDITARICGICPVAYQMSSVHAMEQALGITVGGQLRELRRLLYCGEW
                     IESHALHVVMLHAPDFLGFQDGIQMAAKHGDAVRGGLALKKIGNELMRVLGGREIHPV
                     NVRVGGFYRVPRRVEFAPVAEQLKHARDLAIATVRWVATFPFPDYERDYEFVSLRHPG
                     EYPINEGRVVSNHGLDIAVDDYDNEFEERHVAHSTALQSVLKRRGSYLVGPLARYNLN
                     FDRLPPDVQALAREVGLGPVCRNPFQSIIVRGLELVYACDEALRIIAAYEPPDAPAVK
                     CEPRAGVGHGCTEAPRGILYHRYEIAGDGSIVTARIAAPTSQNQLCIEEDLCEVANQS
                     LDLADDALRDRCEQTIRNYDPCISCSCHFLKLAVHRS"
     gene            10410..10895
                     /locus_tag="VHX39_02930"
     CDS             10410..10895
                     /locus_tag="VHX39_02930"
                     /inference="COORDINATES: protein motif:HMM:TIGR00072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation protease"
                     /protein_id="HEX3990110.1"
                     /translation="MTAAARVLVVGVGNPDRGDDGIGPLVVRQLRGRVSPDVAILERS
                     GDALALIDDWEGRDAVILVDAAAPGGTPGSIHRIDLLRDALPPELSLSSTHGFGVAEA
                     IGLADALDLLPAQVIAYAIEGVNFDPGAPISPQVAAVTGEVAERVAAELRSLAGEADH
                     A"
     gene            10888..11151
                     /locus_tag="VHX39_02935"
     CDS             10888..11151
                     /locus_tag="VHX39_02935"
                     /inference="COORDINATES: protein motif:HMM:NF013334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HEX3990111.1"
                     /translation="MHETGIIHNLVHRLEAAARDAGAERVSGATVWLGALSQMSADHF
                     REHFDTEVRGTVAEGAALTIEVSDDPAAPDAQSVVLRSVELEV"
     gene            11158..13476
                     /gene="hypF"
                     /locus_tag="VHX39_02940"
     CDS             11158..13476
                     /gene="hypF"
                     /locus_tag="VHX39_02940"
                     /EC_number="6.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003998 - acylphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HEX3990112.1"
                     /translation="MTLVQMLEAASEPVTRVRLDLTGAIQGVGFRPFVHRLANTERLG
                     GFVRNTGDGVSIEVEGAAPALERFLSRLDNEMPPRAVIFKRCTAALSPCGDSRFVVAP
                     STHASAGAAVVMADFATCPDCLRDILDPADRRFGYAFTSCMHCGPRYSIIEALPYDRA
                     RTTMRHFPLCAACQAEYNDPYCRRFQAEPIACPDCGPHLALWNDAGTVTATAQAALLE
                     AANAVRRGQIVALKGLGGFQLLVDAGNDAAVLRLRKRKQRPRKPFALMVPSLEAALGM
                     AHVGEGERRLLVSPEAPIVLLRARSYIPGLAASVAPDNPRLGVMLPYTPLHHLLLREF
                     NCPIVATSGNPGDESIVTDETEALERLAGIADCFLVHDRPIRRPVDDSVVRVMAGQPV
                     ILRRSRGYAPMPISYEPVANPVLALGGQQKNAVATGFAGHLFLSPHIGDLTAARTREV
                     FARTAEEQPVLHGIAPDVVACDTHPDYHSTGVALASGLPVARVPHHLAHILACMVDNG
                     LDGPVLGVAWDGTGDGGDGTIWGGEFLTVDAERFRRIAHLRPFRLPGGDAAVREPRRA
                     ALGLLHEIYGDDALANTELAPVAAFTTKERTVLATMLRRGINAPFTSSAGRLFDAIAA
                     ILGFCQRNSFEGEAAMALEFAASRARETVALPPFVIRENDGPLMIDWLPPVLESIQER
                     KHGAPAEPLAAALHDGLSAAIVDVARRVGRRRVVLTGGCFQNARLTERTVDLLCAAGF
                     APYFHQRIPPNDGGLAVGQAVFAARPLLEEKT"
     gene            13476..13715
                     /locus_tag="VHX39_02945"
     CDS             13476..13715
                     /locus_tag="VHX39_02945"
                     /inference="COORDINATES: protein motif:HMM:TIGR00074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HEX3990113.1"
                     /translation="MCLAIPGQIQSITGDDELTRQGRVAFGGIIKVVNLAFAPDAVIG
                     DYVLVHAGFAIAVIDAEAARKTLEYLAEMEPEETA"
     gene            13712..14812
                     /gene="hypD"
                     /locus_tag="VHX39_02950"
     CDS             13712..14812
                     /gene="hypD"
                     /locus_tag="VHX39_02950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HEX3990114.1"
                     /translation="MRYVDEFRDPSLARRYVEAIARITTRPWTLMEICGGQTHSIVRH
                     GIDQLLPPDVTLLHGPGCPVCVTPAESIDTAIAIANRPGVIFCSFGDMLRVPGHEGSL
                     LAARARGADVRMVYSPLDALAIARATPDRQVVFFAIGFETTAPATAMTLAQAKRDGVE
                     NFSLLVAHVLVPPAIEALLSAPDNKVQGFLAAGHVCTVMGYWQYEPIARRFGVPIVVT
                     GFEPIDLLQGLYLCIKQLEAGRAEVENPYSRLVRREGNGTAQSLMREVFTVRTQRWRG
                     MGEIADSGLGVAPDYAHFDASRRFGYMSDVPERPTECLSGEVLRGLRKPFECPAFGTR
                     CTPERPLGATMVSSEGACAAYYRYRRPVEALA"
     gene            14809..15855
                     /gene="hypE"
                     /locus_tag="VHX39_02955"
     CDS             14809..15855
                     /gene="hypE"
                     /locus_tag="VHX39_02955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HEX3990115.1"
                     /translation="MTDGFALSCPIPDNAGDIIEIAHGGGGLLMHRLIDGIIRPGFGL
                     SGDGGAHDGAVFKIGSGRLAFTTDSYVVRPLFFPGGDIGSLAVNGTVNDLAMCGAQPL
                     YLSVGLILEEGLPIAHLQRIVASMRQAADATGVRLVTGDTKVVERGKGDGIYINTAGV
                     GLVRSGIVLEPARVRPGDAVLLSGDIGRHGIAVMAAREGFGFEGDIASDCAPLSATVM
                     RLIDAGIELRCLRDPTRGGLATTLVEIAQAGGVVIRIDESSIAISDPVRGACELLGLD
                     PLYVANEGRFVAFVPQHEASTALAVLRGGPGGDGAAIIGRVEATGRTVLLDGLIGGTR
                     ALDMLSGEQLPRIC"
     gene            15935..16495
                     /locus_tag="VHX39_02960"
     CDS             15935..16495
                     /locus_tag="VHX39_02960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990116.1"
                     /translation="MPETPTFGRYAEIPYDQMTPEQQEGYRSMIETRGGLPGPSKIWV
                     HNPKLAKVAGPFGGHFHAGHYSLTEREREIAVCVITSHFHSAYPTAAHERRGKEVGLP
                     ADKVELIVAGQQTSFTDEREQVVYEMATTLANGRWVPRGLYERAVKALGHVSITDVIT
                     LMGHYSSVAMTLAFYDVPAGAVGLAR"
     gene            complement(16590..17219)
                     /locus_tag="VHX39_02965"
     CDS             complement(16590..17219)
                     /locus_tag="VHX39_02965"
                     /inference="COORDINATES: protein motif:HMM:NF019590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HEX3990117.1"
                     /translation="MIYEVRTYTLRAGATAEFEERYARRLPLREKHSKLGGFWHTEFG
                     PLNQVIHVYPYDDLQQRTAVRAALAQDTARAALPGGGELIVAQESEIMNPAPFMHPLG
                     SRDYGTGNVYEMRTYTFAPGDMPKVLDGWAKAIEARERLSPLAACWTSELGGLNKFIH
                     TWVYKDLNERARVREESRKPGGEWPPQTGVRPIRQENKLLIPAAFSPVR"
     gene            complement(17432..>17701)
                     /locus_tag="VHX39_02970"
     CDS             complement(17432..>17701)
                     /locus_tag="VHX39_02970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990118.1"
                     /translation="RPAPMRRYPDRRHITSTDWSGYPILRFPAAPESVEVHVLPAPGQ
                     PFLGTGEAGQGPMAAAIANALWDATGARVRDLPLSAARVKAAIGV"
BASE COUNT         3072 a         5411 c         5703 g         3515 t
ORIGIN      
        1 ctacttgtga ccgccggccc gcgggatgcg cgttcgcgct ggcgaaagag ggcggccatg
       61 aggaacacgg gaattaccga agcgacggat cgggatgtat cacatgacga gaacgcgcca
      121 gccggtcagt tcacctccac cgcgttcttc tgggaggccg gtaccctcat cgccatatgt
      181 ttggctctgg gcgtgctaat gcagcttctg ctggggtagc gtccgccggt tcatggcggc
      241 gcggtcccgg attgacgcag gtcaatgtgc ggccggcttg ccccgttatc taatctcgta
      301 ctgccacgaa acgaaacggc gactggcgga aacgaacgcc tgaattgcct gaacgtccgc
      361 gtttcacatc cttgggtggg gcgggggaaa atgatgcagc gtagcagatt cagacggaat
      421 ttaggcagcc ttaatgctcg gggaaccgcc tgcacatgga acctttacgt cccaccggct
      481 atctggacgc agcacctcgg ccagtaaccc ggaaacgaac actgctgccc gccgagccaa
      541 accatcttcc accgcctgac actctcgcaa ggagctatcc atgctcgaca tcgccttcct
      601 tgtgattggc gccatctttc ttacggcctg cgtgctttac gcaatcgcct gcgatcatct
      661 gtgaggaacg cgtcatgatc ctcgactacg tgctgggtgc gatcgtctcg gtcggcctgc
      721 ttatttacct cgtctacgcc ttgatccgcc cagaacgttt ctgatcgcgg acagtttgag
      781 gatggcccgg aaatgacttt caacggctgg ctgcagatcg cactgtactg cgtgctgctg
      841 atacttttga ccaaaccgct cggcggctac atgacgcgcg tgttcaacgg cgaccgcacg
      901 ttcctgtcgc cggtgctcgg accgctggag cgcggcctgt accggatcag cggagtcgat
      961 gagactcagg aacaacattg ggtgacctac gcggtcgcca tgctggcgtt cacttttgcc
     1021 ggcttcgtta cgctgtatgg actgcagcgg ctgcaggaca tgctgccgtt caacccccag
     1081 gacatgagcg cggtgtcacc ggacctgtcg ttcaacacct cagtcagttt cgtcaccaac
     1141 acgaactggc agtcctacgt gcccgaacag accatgagtt acctgacgca gatggccggt
     1201 ctgacagtgc acaactttgt gtcggccgcg accggcatcg cacttgccat tgcgctgatc
     1261 cgcggtttcg caaggcgttc cgcgcagacg atcggtaatt tctgggtcga tctgacccgg
     1321 tgcaccttgt acatcctgct gcccatcgcc atcgttgtcg gcctggtttt cgtcgccctg
     1381 ggcatgccgc aaaatctcaa cgcctatgcg gaagccacga ctttggaggg tgccaaacag
     1441 atcatcgccc agggaccggt ggcctcacag gaagtgatca agatgctggg caccaacggc
     1501 ggcggcttct tcaacgccaa ctcatcgcat ccgtacgaaa atcccagcgc gatcaccaac
     1561 ctgatccaga ttctgctgat cttctcgctc ggcgcgtcgt tgaccaacgt gtttggccgc
     1621 atggtcggca gtcagcggca gggttgggcg atcttcgccg tgatgggtgt gttgtttctc
     1681 gcgggtgtaa cgaccgcgta ctgggctgag tccgccggca accctgcctt cgctgccttc
     1741 aatgtcgacc agactgccag cgcattgcag ccgggcggca acatggaggg caaagaagtc
     1801 cgtttcggca tcgccaactc ggcgctgttc accaccatca ccaccgacgc gtcctgcggt
     1861 gccgtcaaca acatgcatga cagcctgctg ccgatcgccg gcatggtgcc gatcgtcaac
     1921 atcatgctgg gtgagatcat cttcggcggc gtcggctccg gtctctatgg catgatgctc
     1981 tttgtcatcg tcgccgtgtt cgttgccggt ctgatggttg gccgtacgcc ggaatacctc
     2041 ggcaagaagc tggaggcgaa agaggtcaag atggccatgc tgggcatcct gatcctgccg
     2101 atgtcgatgc tgggcttcac cgcgctggcg gtggtgctgc cggtcggtac cggcgccatg
     2161 gccaatgccg gaccgcatgg cttcactgaa gcgctgtacg cctatgtctc cgcgactggc
     2221 aacaacggca gcgcgttcgc cggcctctct gccaacgtgc cgttctggaa caccacgctg
     2281 ggtctggcga tgttcatcgg ccgcttcatg atgatcatcc cgatgctggc gatcgccggc
     2341 tccttggtgc gcaagaagat cgttccggtg tcaaccggca cgtttccgac cgatggcggc
     2401 ctgtttgtcg gcctcgtcgt cggcgtgatt gcgatcaccg gcggtttgat cttcctcccc
     2461 tcccttgccc tcggacccgt cgtcgagaac ctggcgatgc acgcgggcac tttgtatgac
     2521 acgggcagtt aatattatgg acagcagaac caaccggcgg gcctcgcaat cgacgatgct
     2581 ggatcccgcc attctcttcc ccgccatcgg ccagtcgttc gtcaagctcg atccgcggct
     2641 gatgatccgc aacccggtga tgttcgtcgt cgaggtcgtg gcgaccctga ccacggtgat
     2701 cttcgtgcgc gatgtgctca cgcacggcga atacctcggg ttcacctttc agatcgtggc
     2761 ctggctgtgg gttacggtgc tgttcgccaa cctcgccgag gcggtcgcgg aaggccgtgg
     2821 caaggcgcag gcggcgacgt tgcgcaaggc gcgcaccgag actgtggcca agcgcctgcc
     2881 cgctgtcacc gccacacagt accaggaggt ggcggcaccg gacctcaagc agggcgacat
     2941 cgttctcgtg gagatgggcg acctgatccc gagcgacggt gacgtgatcg aaggcatcgc
     3001 ctcggttgac gagtccgcca tcacgggcga gtccgccccg gtgatccgcg agtctggcgg
     3061 cgaccgttcg gccgtcaccg gcggcacgcg ggtgctgtcc gactggatca aggtgcgtat
     3121 taccgcagcc cagggctcga cgttcctcga ccggatgatt gcgctggttg aaggggcgga
     3181 acggcaaaag acgccgaacg agattgcgct gaacatcctg ctcgccggcc tgaccatcat
     3241 cttcgtcttc gcggtggtca ccattccgag tttcgccact tatgccggcg gctcgctgtc
     3301 ggtcatcatt ctggtcgcgc tgttcgtggc gttgatcccg accaccatcg gcgcgctgct
     3361 atcggcgatc ggcattgccg gcatggaccg gctgatccgc ttcaacgtga tggcgatgtc
     3421 gggccgtgcg gttgaggcag ccggcgacgt cgacacactg ctgctcgaca agaccggtac
     3481 gatcacgctt ggcaaccggc aggcgaccga cttcttcccg ttgaccgggg tcactccgga
     3541 cgaactggcg gatgcggcgc aactgtcatc gttgccggac gagacgccgg aaggccggtc
     3601 catcgtcgtt ctggccaagg agaccttcgg catccggggc cgcgagatgg caccgatggg
     3661 cgcgcgcttc gttccgttct cggcgatgac gcggctttca ggtatcgact tcgacggctc
     3721 ctcgatccgc aaaggcgcgg tcgacgcgtt gttggcatgg gcacgtgaga ccacggatac
     3781 cgcggccagg agcggcggcg tcaccacggc tgtgcagtcc tcgataaccg atgcggcggt
     3841 gcgcgaaatg accgccaagg ctgaggagat cggtaaggca ggcggcacgc cgctggcggt
     3901 ggcgaaagac ggacggctgc tcggcaccat ctacctgaag gacatcgtca agggcggcat
     3961 ccgcgaacgt ttcgccgagc tgcgccggat gggcattcgc accgtgatga tcaccggcga
     4021 caatccgctg accgcagcag cgattgcggc cgaggcgggg gtcgacgact tcctcgccca
     4081 ggcaacgccg gagatgaagt tgaagctgat ccgtgacgag caggcgcagg gcaaattggt
     4141 ggcgatgtgc ggcgacggca ccaacgacgc gccggctctg gcgcaggcgg atgtcggcgt
     4201 ggcgatgaac accggcacca tggcagcgcg cgaggccggc aacatggtcg acctcgatag
     4261 cgatcccacg aagctgatcg aaattgtcga aattggtaag cagctcttga tgacccgtgg
     4321 tgcgttgacc acgttctcca tcgccaacga cgtggcgaag tactttgcca tgatcccggc
     4381 gatgttcatc gcgttctacc cgcagctaca ggcgctgaac gtgatgcacc tgtccaatcc
     4441 gcgcagtgcc attctgtcgg cgatcatctt caacgcgctg atcatcgtcg cgttgatccc
     4501 gctcgcgctg aaaggcattg cttaccggcc gatcggcgct gccgctctgc tgcggcgtaa
     4561 tctgctgatt tatggcgtcg gcggcatcat cgtgccgttc gtcggcatca agctgatcga
     4621 tatggctgtc agcgccatag gccttgctta attttgttcc ggccgcggcg gaaccgtttt
     4681 ccgcccggcc gggtcacaaa ggatccactg caatgttgca acatattcgt cccgccattg
     4741 tgatgatcgt tgggatgacc ctgatcaccg gcctggctta tcctctgggc atgaccggtc
     4801 tggcccagtt gctgttccat catcaggcga atggcagcct gatcgagcgg gatggcaagg
     4861 tgatcggctc ctcgttgatc gggcaaaact tcaccagcga gaactatttc catggcaggg
     4921 tgtcagcgct caccggcacc gatccgaagg atccgaccaa gaccgtcccg acgccctacg
     4981 acgcgtccaa ttcgggtggc tccaatcttg gtccgacgtc caaggccctg gtcgatcggg
     5041 tgaaggatga cgcagcgacg ttgcaggcag agaaccccgg cgtgccggtg ccggcggacc
     5101 tggtcacttc atcggcgagc ggcctggacc ctgatatcac tcccgctgga gcactgttcc
     5161 aggtgcctcg cgtcgccaaa gcgcgcggcc tctcgcagga cgttgtgcgg cagttggtcg
     5221 aggcccatac ccaggcgcgg tttcttgggc tgattggtga gccgcatgtc aatgtgctgg
     5281 aactcaacat ggcactggat gcgttgggta aaagttaagt cgtttcgcat acgcgcaaga
     5341 tgacagtgga agcgccgcgg tgagggagca acctcaccgc ggcgtcttgc gttggcccgc
     5401 acccgcaaca tgccaggcgg agcgtcgtat cccaaccgga acgtcaaacc cgggacatta
     5461 gatgatacct cgtggttggt tccgtccatc catttctgga tccgtagcgc gcagcagtgg
     5521 actgcgcttc ctgacgacgc catacgctac gaaacccaac ccgaaaccct gagttgggtg
     5581 acaccgcacg cacaggaata gttttcggac cccaacgtgg acccgtttgc gggaggggtg
     5641 gcttgaccgc ttcgcacgaa cgtccaccat acctgcataa acggccagcg cggacacagg
     5701 ccatggcggg tcgggacgac gtttccgtgt cgggttgatg tggatcagtg aatgccgctg
     5761 cgtcgcacgg tgaacctgct gcaggtcgcc gggagctggc attttgggta cgatagcaac
     5821 attccatgcg cttgcccgac gctggcgaaa ttggtggcaa ttccacaact ataggatgta
     5881 ggttctcgca gggcggacag caacggagat tcagatggcg gttgatccac ccacagtgac
     5941 ccaggccatc ctgtccctcg acggtctgcg tgccctcatc gaagcgttgg cgcggctggg
     6001 ttaccgggta ttgggcccga ccgtgcgcga cggagccatc gtgtatgacg acgttgccag
     6061 gcttgccgat ctgccaaccg gatggactga ccaacaggaa gccggccgat atcggcttga
     6121 acgccgttcc gacaacgcat tgttcggcta tgccgttggc ccacagtcgt ggcggcgctt
     6181 cctgcagcaa cccgtccaac gcatgtggca ggcgcagcgc accgaggacg ggtttaccgt
     6241 cgtcgcggct gacgataccg cgccgagatt tgccttcctc ggcgtccgtt cctgcgaaat
     6301 tcacgcaatt gccatacagg acaaggtgtt cgtcgaggga ccgtatgtcg atacggatta
     6361 tcaacggcgg cgccgggata atttcatcgt tgcggtaaac tgcggccagg caggcggcac
     6421 ctgcttctgc gtgtcgatga ataccgggcc gaaggtcgac accggtttcg atctcgcatt
     6481 gaccgagctg atcgacgctg actcgcatcg ctttctgatc gagactggca gcgctgccgg
     6541 cgccagcctg ctggctcaat tgccgcacga tgtcgcatca cctgaggaca tcgccgccgc
     6601 tgcggctgtt gtggcgcgga ccgccggttc catgggccgc aagctggaca ccgatgggct
     6661 gaagcagttg ctgcagaaca accccaccca tccgaggtgg gacgatgtcg ccagccgctg
     6721 cctcgcctgt gccaactgca ccatggtttg cccgacctgc ttttgcacaa ctgtcgaaga
     6781 tcacactgac ctcaccggtc agacagccga acgagtccgc cgttgggact catgtttcac
     6841 ggcagactac tcctttattc acggtggcag cgtgcggccc gcgacaaagt cgcgctatcg
     6901 tcaatggatc acccacaaac tcgcgagctg gatcgaccag tttggcacct caggctgcgt
     6961 tgggtgtggc cgttgcatga catggtgccc ggtcggcatc gacatcacgg tcgaagcggc
     7021 agccatccgg gccacgtcga cgtttccgca ggaggccgat catggagggg cttgaacgca
     7081 tcgtcctggc gcatccgttc ttcgcggggt tcgaaaagga acttggcccg gtggtgtccg
     7141 gttgcgcgcg caaccatcgc ttcaacgccg gccagtatct ggcgcacgag ggcgatccgg
     7201 cgaacgaatt cttcctcatc cgccatggca aggtcgctct tgaaattctc tctcctgggc
     7261 aacaaccgac cgtgttttcc acagagagtg agggcgacat cgtcggcacc tcctggctcg
     7321 tgccaccgta tctctgggct ttcgatgcgc gcgcggtgga actcacccgc gcgattggca
     7381 tcgatgccag atgcctgcgc gataaatgtg aggctgatcc gcgtctcggc tacgacttga
     7441 tgaagcgcat cgtgccgatt gtcgtcggcc ggttgcacaa cacgcggatc cagatgctcg
     7501 acgtttacgg gacgtcccgc aagtgaccgt cgtggtcgat ccgttcgtcc ctctgccgta
     7561 tcgtgttggc cgggtgcggc gggagacccg cgacatcagg accctggaac tcgccccggt
     7621 cactggcgag cggccggatt accaacccgg ccagttcaac atgctctacg tgttcggcat
     7681 tggggaagtc gcgatcagcg tgagcggcaa tgcgggctcg ggcggcagct acgtgcacac
     7741 cgtgcgcgat gtcggcgtgg tcagcggggc aattgcaaag cttggcgttg gagccacgtt
     7801 gggtgtgcgc gggccttttg gcacaccgtg gccggtcgag agcgcagagg gcagcgatgt
     7861 ggtgttcgtg gccggcgggc ttggcctggc accgttgcgg cctgcgattt accatgtgct
     7921 ggcgcggcgg gaacactatg gacgcgtagt gattttgtac ggcacgcgca gtccgtcgga
     7981 catcctgttt cgtcacgaag tcgagcgttg gcggcgccgt ttggacctcg aagtcctggt
     8041 taccgtcgat cgcgccgatg cggagtggcg aggcgatgtc ggcgtcgtgc caagactgat
     8101 cgcgcgggca gggttcgacc cgcacagtgc agtcgccatg gtttgcgggc cggaactgat
     8161 gatgcgcttt accgccaatg ccttgcaggc agcgggcgtc gagccggtgc ggatttatct
     8221 gtcgatggag cgcaacatga agtgtgccat cggcctgtgc ggtcattgcc agttcggacc
     8281 ggacttcgtg tgcaaggacg gcccggtcat gcggtacgac cgtatcgccg atattatgac
     8341 tgtgcgggag atctgagatg gcagaacctc ggaagccgcg gctggcggtg tggaagttcg
     8401 cctcctgcga cggctgtcag ctttcgctgc tcgattgtga ggacgaactg cttgcagtgg
     8461 ccggcgcggt cgagatcgcg tatttcccag aagcctccag cgtaatggcg aaagggcctt
     8521 acgacctgtc gctggtcgag ggctcgatca ccaccgcaca cgatgcggaa cgcattcacc
     8581 ggatccgccg gcagtcgaaa ttcctggtaa cgatcggtgc ctgcgcgacc gccggcggca
     8641 tccaggcctt gcgcaatttc tccgacatca acgacttcgt agctgccgtc tacgcatcgc
     8701 cgcagtatat caaaacactg gccacctcga cgccgatttc tgcgcatatc aaagtggatt
     8761 tcgaactgaa cggctgcccg atcgacaagg cgcagttgct ggaagtcatt tccgcattcc
     8821 tggccggacg taagccgcaa atcggcaatc ataccgtctg tatcgagtgc aagttgcgcg
     8881 gcaatacctg cgtcatggtg atggggacac cctgcctcgg cccggtcacc catgccggct
     8941 gcggtgccat ttgtccctca ttcaatcgcg gctgttatgg ctgtttcggg cccagggagc
     9001 gaccgaatac cgcagcgctc gcggctgaat ggttgaaact gggtgcgacg ccacgcgatc
     9061 tgcaccgcgt attccgcact ttcaacgcca gtgcggaacc gttccgccag gagagcgatg
     9121 cgcatggcga ctaaaacgat ccgtgtcgac tatatcgcgc gtgtcgaagg cgagggtgcg
     9181 ctcgacctga ccatccggga cgggcgcgcg gtttctgcac aactgaagat cttcgaacca
     9241 ccgcggttgt tcgaagcgtt actgcgtggc cgcggctttg ccgaagcacc ggatatcaca
     9301 gcccgcatct gcggtatttg tccggtcgct tatcaaatga gttcggtgca cgcgatggag
     9361 caggcgcttg gcatcaccgt gggcggccaa ctgcgggagc tccgccggct gctgtattgc
     9421 ggcgaatgga tcgagagcca tgcgttgcac gtcgttatgc tgcacgcgcc ggattttctc
     9481 ggcttccagg atggtatcca aatggcagcg aagcacggtg acgcggtgcg cggcggcctc
     9541 gccttgaaga agatcggcaa cgaactgatg cgcgtactgg gcggacgcga aatccatccg
     9601 gtgaatgttc gcgtcggcgg attttaccgc gtgccgcgac gggtggagtt cgcgccggtc
     9661 gcagaacaat tgaagcacgc gcgcgatctg gccatcgcga ccgtgcgttg ggtggcgaca
     9721 ttcccatttc ccgactacga gcgcgactac gaattcgtct cgctgcggca tcccggcgag
     9781 tatccgatca acgaaggccg cgtggtctcg aaccacggcc tcgacatcgc ggtcgacgac
     9841 tatgacaacg agttcgagga acgtcacgtc gcgcactcga cggcattgca atcggtgctg
     9901 aaacggcgtg gcagttatct tgtcggaccg ctcgcgcggt acaacctgaa tttcgaccga
     9961 ttgccgcccg atgttcaggc actggcgcgt gaggtcgggc ttggaccggt ctgccgcaat
    10021 ccgttccaaa gcatcatcgt gcgcggcctt gagctggtct acgcctgcga tgaggcgttg
    10081 cgtatcattg cggcctatga gccgccggac gccccggccg taaagtgcga accgcgtgcc
    10141 ggcgtcggtc atggctgcac cgaagcgcca cgcggtatcc tgtatcaccg ctacgagatc
    10201 gccggcgacg gcagtatcgt gacggctcgc atcgccgcgc cgacctcgca aaaccaactg
    10261 tgcattgagg aagacttgtg cgaggtggcg aaccagtcgc tcgaccttgc cgacgatgca
    10321 ctgcgcgatc gctgcgaaca gacgattcgc aattacgatc cgtgcatatc ctgctcctgt
    10381 catttcctga agctggcggt gcaccggtca tgaccgcagc ggcgcgcgtc ctggtcgtcg
    10441 gcgttggcaa ccccgaccga ggcgatgacg gcatcggccc attggtggtg cgtcaactgc
    10501 gcggacgcgt gtctcctgat gttgccattt tggaacggtc cggcgacgcc ctggcgctga
    10561 tcgatgactg ggaaggccgt gatgcggtga tcctggtgga tgcggcagca cctggcggca
    10621 cgcctggaag tatccatcgc atcgacctgt tgcgcgacgc gttgccgccg gaactctcgc
    10681 tgtcctcgac ccatggtttt ggcgtggcgg aagcaatcgg tttggccgat gccctcgatt
    10741 tgttgccggc ccaggtgatc gcttatgcga tcgaaggggt gaatttcgat ccgggggcgc
    10801 cgatcagccc ccaggtagcc gccgtcaccg gtgaagtggc ggaacgtgtc gctgccgaac
    10861 tgaggtcact ggcaggagaa gccgatcatg catgagaccg ggatcattca taatctcgtg
    10921 catcgtctgg aggcagccgc gcgcgacgcc ggggccgagc gggtctcagg cgcgaccgtc
    10981 tggttgggtg cgctcagcca gatgtcggcc gatcattttc gcgagcactt cgacaccgag
    11041 gtgcgtggca ccgtcgccga aggtgcggcc ctgacgattg aggtatcgga cgatcccgcc
    11101 gcgccggatg cgcaatccgt tgtgctgcga tccgtcgaac tggaggtctg agccgcaatg
    11161 acccttgtcc agatgctcga ggcggccagc gagccggtaa cccgcgttcg gctggacctt
    11221 accggcgcca tccagggcgt cggctttcgc ccctttgtcc accgcctcgc caacaccgaa
    11281 cgactgggcg gtttcgtgcg caacaccggc gatggcgttt cgatcgaagt cgagggcgcg
    11341 gcgccggcgc tggaacgttt cctgtcgcgg ctcgacaacg aaatgccgcc ccgcgcggtc
    11401 atcttcaaac gctgcaccgc tgcgctcagc ccgtgcggcg acagccgctt tgtcgtggca
    11461 ccgagcaccc acgcaagtgc tggtgcggcg gtggtcatgg ctgacttcgc gacctgcccg
    11521 gactgcctgc gggacatcct ggatccggcc gaccggcgat ttggctatgc ctttacaagc
    11581 tgcatgcact gcggcccacg ctacagcatc atcgaggcgc tgccgtacga tcgtgcacgg
    11641 accacaatgc ggcatttccc gctctgcgcg gcctgtcagg cggagtacaa cgacccgtat
    11701 tgccggcgct ttcaggccga gccgatcgcc tgccccgatt gcggcccgca cctcgcgcta
    11761 tggaacgatg caggcacggt aacggcaacc gcgcaggcgg ccttgctgga ggcggccaat
    11821 gcggtgcgtc gcggccagat cgtggccctg aaaggactgg gtggcttcca acttctggtg
    11881 gatgccggca acgatgccgc agtgctccgc ttgcgaaaaa ggaagcagcg gccccgcaag
    11941 ccgttcgcac tgatggtgcc gtcgctggag gcagccctcg ggatggcgca tgtcggtgag
    12001 ggcgagcgcc gcctgctggt ctccccggaa gcgcccatcg tcctgttgcg agcgcgttcc
    12061 tatattcctg gccttgctgc ttcggtcgcg ccggacaatc cccgccttgg tgtcatgctg
    12121 ccctacaccc cgctgcatca tctgttgctg cgagagttca actgcccaat cgtggcgacc
    12181 agtggcaatc ctggcgacga gtcaatcgtt acagatgaaa ccgaggcgct cgaacggttg
    12241 gctggcattg ccgactgctt tctcgtgcac gaccgtccga tccggcggcc ggtggatgat
    12301 tcggtggtgc gtgtcatggc cggacaaccg gtgatcctgc gccgttcccg cggttacgcg
    12361 ccgatgccga tttcttatga gccagtggcc aacccggttc tcgctctggg cggccagcaa
    12421 aagaacgcgg tggcgacggg ctttgccgga catttgttcc tcagcccgca tatcggcgat
    12481 ttgacagcag cccgtactcg cgaggttttc gcgcgaacgg ccgaggaaca accggtattg
    12541 cacggtatcg ccccggacgt cgtggcctgc gacacgcatc ccgactacca cagcaccggc
    12601 gtcgctctgg cgtcgggtct gccggtcgcg cgcgttccgc atcacctcgc acacattctg
    12661 gcctgtatgg tggataacgg actggacggg ccggtactcg gcgttgcctg ggatggcacc
    12721 ggcgacggtg gcgacggaac gatctggggc ggcgagttcc tgacagtcga tgccgagcgc
    12781 ttccgccgga ttgctcacct gcggccgttc cggttgcctg gcggcgatgc ggcggtgcgt
    12841 gagccgcgcc gtgccgcact cgggttgttg cacgaaattt atggtgacga cgcactggcc
    12901 aacacggagc tggcgccggt tgccgccttt acgaccaagg aacgaaccgt cctggcaacg
    12961 atgctgcgcc gcggcatcaa cgcaccgttc acgtccagtg ccggccggct gtttgatgcg
    13021 attgccgcca ttcttggctt ttgccagcgg aacagcttcg agggtgaggc cgcgatggca
    13081 ctcgaattcg ctgcgtcgcg ggctcgcgag acggtggctc tgccgccctt tgtcattcgc
    13141 gagaacgatg gaccgttgat gatcgattgg ttaccgccag tgctggaatc gatccaggag
    13201 cgaaagcatg gcgcgccggc ggagccactc gctgcagcgc tgcatgacgg attgagcgcg
    13261 gcgatcgtcg atgtcgcccg cagggtaggc aggcgacgcg tggtgttgac cggaggttgt
    13321 ttccagaacg cgagactaac cgaacgaacc gttgacctgt tgtgcgccgc ggggttcgcg
    13381 ccgtatttcc atcagcgcat tccgccgaac gatggcggat tggccgttgg ccaggcggtc
    13441 ttcgccgctc gccctctgct tgaggagaaa acctgatgtg tctcgccatt ccgggccaga
    13501 tccagagcat cacgggggac gatgaactga cccggcaagg ccgtgtcgca ttcggcggca
    13561 ttatcaaagt ggtgaacctc gccttcgcgc cggacgctgt gatcggggac tatgtgctgg
    13621 tgcatgccgg tttcgccatc gcggttatcg atgcggaggc ggcacgcaaa acgcttgagt
    13681 atttggccga gatggaaccc gaggaaacgg cgtgagatac gtcgacgagt ttcgcgatcc
    13741 gtcgctggct cgccggtacg tggaggcgat tgcgcggatc acgacccggc cctggacact
    13801 gatggaaatt tgcggtggcc agacgcactc cattgtgcgg cacggcatcg atcaattgtt
    13861 gccacctgac gtgacgctgc tgcacggccc aggatgcccg gtttgcgtaa cgccggcaga
    13921 gagtatcgat acggcgattg ccattgccaa ccggccgggc gtcatctttt gctcgttcgg
    13981 tgacatgctg cgggtgccgg ggcacgaggg tagcctgctc gcggcgaggg cgcgtggcgc
    14041 ggatgtgcgg atggtctatt cgccgctcga tgcactggcc atagcgcgcg cgacgccgga
    14101 tcgtcaggtg gtgtttttcg caatcggttt tgaaacgact gcgcccgcca cggcaatgac
    14161 gctggcgcag gcgaagcgcg atggggtcga gaatttctcg ctgttggtgg cccatgtgct
    14221 ggtgccgccg gcgatcgagg ccttgctgag tgcgccggat aacaaggtgc aaggcttcct
    14281 ggcggcgggc catgtttgca cggtcatggg gtactggcag tacgaaccga tcgcgcgccg
    14341 ctttggcgtg ccgattgtgg tcaccgggtt cgaaccgatt gatctgctcc agggcctgta
    14401 tttgtgcata aagcagcttg aggccggccg cgcagaggtg gaaaacccct atagccgcct
    14461 ggtgcggcgg gagggcaatg gcaccgccca aagcctgatg cgtgaggtgt ttaccgtccg
    14521 aacgcagcgc tggcgcggga tgggggagat tgccgacagc ggtctcggcg tggcaccgga
    14581 ttacgcgcac ttcgacgcct cccgccgatt tggttacatg tccgatgtgc cggaacgtcc
    14641 caccgaatgc ctgtccggcg aagtgctgcg gggactgcgc aagccgttcg aatgtccggc
    14701 gtttggcaca cgctgcacgc cggaacggcc gctcggcgcg acgatggttt cctcggaggg
    14761 ggcgtgtgcc gcctattacc gctaccgccg tccggttgag gcgcttgcat gaccgacggg
    14821 ttcgcattgt cctgcccgat cccagacaat gccggcgaca ttatcgaaat cgcccatggc
    14881 ggcggtggcc tgctgatgca ccggttgatc gacggcatta tccgccccgg gtttggtttg
    14941 tcgggtgatg ggggcgcgca tgatggggcg gtgttcaaaa tcggtagcgg acggctggcg
    15001 tttaccaccg attcctacgt ggtgcggccg ctgttctttc cgggtggcga cattggctcg
    15061 cttgcggtca acggcacggt caacgacctg gcgatgtgcg gcgctcagcc gctgtattta
    15121 agtgtcggac tgatccttga ggagggtttg ccgatcgcgc acctgcaacg gattgtcgca
    15181 tcgatgcggc aagcagccga cgccaccggt gttcggctgg tgaccggtga taccaaagtt
    15241 gtcgagcgcg gcaaaggcga tggaatttat atcaataccg cgggcgtggg tttggtgcgc
    15301 tccggcatcg tgctggaacc ggcgcgggtg cggcctggcg acgccgtgtt attgagcggc
    15361 gacatcggcc gccatggcat cgccgtgatg gcggcgcgcg agggatttgg tttcgagggc
    15421 gacattgcca gcgactgcgc gccgctgtcc gcaacggtga tgcggctgat tgacgcgggg
    15481 atcgaactgc gttgcctgcg cgatccaacg cgcggcggac tggcaacgac attggttgag
    15541 atcgcccagg ctgggggtgt ggtcattcgt atcgatgaat catcgattgc aatctcggat
    15601 ccggtgcgtg gcgcctgcga gttgcttggg ctcgatccgc tgtatgttgc gaatgaaggc
    15661 cggttcgtgg cgttcgtgcc gcaacacgag gcgtcgacag ctttggcggt gttacgcggt
    15721 gggccaggcg gggatggtgc tgcaatcatc ggccgggtgg aggcaacggg ccgaactgtc
    15781 ctgctcgacg gcctgattgg cggcacgcgg gcgctggata tgctgagcgg ggaacaactg
    15841 ccgcgcatct gctgaggtct gtgccagcgc gtcgacagcg aaccctggct gtcgcaggat
    15901 gcgccgccaa tcaagcccag gaaggaaacc agatatgccc gaaacaccaa ccttcggccg
    15961 ttatgccgag atcccctatg accagatgac gccggagcag caggaaggct accgctccat
    16021 gatcgagact cgcggcggtc ttcctgggcc gagcaagatc tgggtgcaca atccgaaact
    16081 ggcgaaagtc gcgggaccgt tcggcggcca tttccacgcc ggccattact cgctgaccga
    16141 gcgcgagcgg gaaattgcgg tctgcgtcat caccagccat tttcattccg cctatccgac
    16201 ggccgcgcat gagcggcgcg gcaaagaagt cgggctgccg gccgataagg tcgaactgat
    16261 cgttgccgga cagcaaacgt cgttcaccga cgaacgcgag caggtcgtct atgagatggc
    16321 aacgacgctg gccaacgggc gctgggtgcc gcgtggcttg tacgagcgcg cggtcaaggc
    16381 actcggccat gtcagcatca ccgacgtgat cacgttgatg ggtcattaca gcagcgtcgc
    16441 gatgactctg gcgttttatg atgtccctgc cggcgcggtg ggactggcgc gctgagtgca
    16501 aaacggccgg gtcatacccg gccttttcgc gtggcgcagt cgccggatga tggtcgagtt
    16561 caacccgcat ccggcgaccg ttactcagct taccgtactg gcgagaacgc cgccgggatc
    16621 agtaacttgt tctcctgccg gatcggccgc acgccggttt gtggtggcca ctcgccgccc
    16681 ggcttacggg attcctcgcg gacgcgggcc cgctcattaa gatccttata cacccatgtg
    16741 tggatgaact tgttgagccc gccaagctcg ctggtccagc aggccgccaa cggcgataga
    16801 cgttcgcggg cctcgattgc cttggcccag ccatccagca ccttgggcat gtcgccggga
    16861 gcgaacgtgt aggtccgcat ttcatacacg ttcccggtgc cgtagtcccg gctgcccagg
    16921 ggatgcatga acggcgccgg gttcatgatc tcggactctt gcgcgacgat cagttcgccg
    16981 ccgccgggaa gcgctgcccg tgcggtgtcc tgcgcgagtg ctgcgcgcac cgccgttcgc
    17041 tgttgcagat catcataggg atagacgtga atgacctgat tgagcgggcc aaattcggtg
    17101 tgccagaagc cacccaattt ggaatgtttc tcccgcaagg gcagccgcct ggcataacgc
    17161 tcttcaaatt cggccgtagc cccggcgcgc aaggtatagg tgcgaacttc gtaaatcatt
    17221 ggtgcatcct ccaggattgg cgttgtcagc gaaccggtgg cgcattctgt cccgcctgag
    17281 ggcggccgag ctacgatcgg aacaaaatac gccgctccgt cgtccggtca tgaagccagg
    17341 ccgtgcgtgg ggcttcttgt gccaccaact gttgcgctta ctcctgtggg gccccgttgc
    17401 aaagcggccg atgggacggg agattgacct ttcacacccc aatcgccgcc ttcactctgg
    17461 cggccgacaa cggcaaatct ctgaccctcg cccctgttgc gtcccacagt gcattggcaa
    17521 tcgcagcggc catcggacct tgcccagctt ccccggtgcc caaaaacggt tgccccgggg
    17581 cgggcagcac gtgcacctcg acgctttccg gcgccgcggg aaaacgcagg atgggatagc
    17641 cgctccaatc ggtgctggtg atatgccgcc ggtcgggata tcgccgcatt ggtgccggcc
    17701 g
//
LOCUS       DATAVD010000160         4904 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_573202, whole genome shotgun sequence.
ACCESSION   DATAVD010000160 DATAVD010000000
VERSION     DATAVD010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4904
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_573202"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(116..1189)
                     /locus_tag="VHX39_02975"
     CDS             complement(116..1189)
                     /locus_tag="VHX39_02975"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3990119.1"
                     /translation="MKNIWATVAFVILLLIVPTVYFSGYHLFQLTMVVVYAVAILGMA
                     ILVGFNGQISLGSGAFYAIGAYTTAILMTTWDVPYWLTLPIAGVICAGFGFLIGLPAL
                     RLAGHHLALTTFALAVAVPQVLKYKLFEDWTGGVQGLVIDKPDPPFGLPLSSDQWLYL
                     FSFGVAVAMYVLAWNLVRGRIGRAMKAIRDHATAAEAMGINLAMIKTRTFAVSAMYTG
                     VAGSIGAIVVAFVAPDSFSIFLSITLFVGLCAGGASSIPGTIVGAAFIEFVPNFAEQV
                     SKAAPGAIYGVILIAMLFLMPMGAGGFLARIWRQSVGSQGTLGGEARPVALGHEATVP
                     VDLTGSLARADRMPVGGGEGVKP"
     gene            complement(1194..2063)
                     /locus_tag="VHX39_02980"
     CDS             complement(1194..2063)
                     /locus_tag="VHX39_02980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016452539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3990120.1"
                     /translation="MEGLIHQIIAGIATGGIYASVSLALVMIYQATHHINFAQGEMAT
                     FSTYITLTFINLGMPYWAAFFLAVAVSFCIGVAIERVLIRPMVNAPILSAIGVFIGLL
                     LIVNSMSGWLFDYTIKQFPSPFPDESLFGGYVSGHQLGSTGVTLAVLTAVYLFFRHTS
                     LGLAMRAAALNPVSARLVGVRVGWMLALGWGLAAAIGSVAGCMVAPVVFLDPNMMAGI
                     LLYAFAGALLGGIDSPLGAVLGGFAVGVIENLGGAYLVGTELKLTLALVIIISVLTVR
                     PSGLLGRTVQSRV"
     gene            complement(2076..2786)
                     /locus_tag="VHX39_02985"
     CDS             complement(2076..2786)
                     /locus_tag="VHX39_02985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012978041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3990121.1"
                     /translation="MPALLEAKGLHAAYGETRVLHGIDFSVEDGGVTALLGANGAGKT
                     TTLRAICGMVRAQGDIILGGEAIAGMATEDVVRRGVAHVPDGRGTFMELTVEENMRLG
                     SITRKDREVEADFERMFGYFPRLKERFRQQAGTLSGGEQQMLAITRALLLRPRLLLLD
                     EPSFGLAPLIVKEIFNIMRRIRDEEKVSILLVEQNASLALAFAEDAYLLETGRIVVSG
                     KAADISKDESIRRSYLGY"
     gene            complement(2770..3579)
                     /locus_tag="VHX39_02990"
     CDS             complement(2770..3579)
                     /locus_tag="VHX39_02990"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3990122.1"
                     /translation="MASASSQPLLRISGVQMRFGGVIALGGVSFDVDHGQICGLIGPN
                     GSGKTTLFNCISGIYRYNEGDIVFEGKSLTNVPRHRRAGIGLGRTFQNVALFRAMSVR
                     DNILVGAHSTATSGYIANALRLPIVRREQEDADRRLYELLDLLDLRQVTDTPAGAIPF
                     GWQKRVELARALMTQPKLLMLDEPAGGLNHSEVDELAVLMRRVREQLNLSILLVEHHM
                     NLVMRVSDKVVALEFGIKIADGTPDEVRAEPEVIRAYLGDTQEDEAHAGAA"
     gene            complement(3720..4472)
                     /locus_tag="VHX39_02995"
     CDS             complement(3720..4472)
                     /locus_tag="VHX39_02995"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014457234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX3990123.1"
                     /translation="MRLANKVAIVSGAASGMGAATARRFAKEGAKVVIADQLEGEGKI
                     VAGEIENAGGTAVYMSLNVTDEAGWNKVVAETVALYGHLDILVNNAGISGSAVNDLLE
                     SGIWHRVMEVNSTGVFLGTAAAVRQMQKNGGGSIVNLSSISGVVGQTMVHMAYNASKG
                     AVRTMTKATAVQFGKDNIRCNSVHPGLMPPMRTSGATADPTVRAKMLRAVPLGRSGEV
                     DEVANAILFLASDEASYITGAELYVDGGYLAM"
     gene            4582..>4904
                     /locus_tag="VHX39_03000"
     CDS             4582..>4904
                     /locus_tag="VHX39_03000"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3990124.1"
                     /translation="MAHRGLKFGIFLAPFHKVGENPTLAIGRDVELLQWLDELGYDEA
                     WIGEHHSAGWELIASPELIIAAAAEKTKYIKLGSGVTSLPYHHPFLVAQRWVQLDHMT
                     RGRAM"
BASE COUNT         1063 a         1573 c         1385 g          883 t
ORIGIN      
        1 gtcagcggat tttcacttcc gaggaagcag cgcggcccga tcagcgcgca acccttcctg
       61 ggccctcgcg ccagagcgtc tgtgccggaa attggatacg agaaaatcga cagacctagg
      121 gtttcacacc ctcgccacca ccgaccggca tccgatccgc ccgcgccagc gaaccggtca
      181 ggtcgacagg gacggtggcc tcatgaccca gggccacggg ccgcgcttcg ccgcccagcg
      241 ttccctggga cccgactgat tgccgccaaa tccgggccaa aaatcctccc gcgcccatcg
      301 gcatcaggaa cagcattgca atcagaatca caccgtagat tgcgccaggt gcggctttcg
      361 acacctgctc ggcgaagttt ggtacgaatt cgataaaggc agcccctacg attgtccccg
      421 ggatcgagga cgcaccaccc gcgcacagcc cgacaaacaa cgtgatcgac aggaatatcg
      481 agaagctgtc cggtgccacg aatgccacca cgatggcgcc tatcgagccg gcgaccccgg
      541 tatacatggc actgacggca aaggtacgcg ttttgatcat ggcaagattg atgcccatcg
      601 cctcagctgc cgtcgcatga tctctgatcg ccttcatggc gcgaccgatc cgtccgcgga
      661 ccaggttcca cgccagcacg tacatcgcga ctgcaacgcc gaagctgaac aaataaagcc
      721 actgatccga cgacaacggt agcccaaatg gtggatctgg cttgtcaatg acaaggcctt
      781 gcacaccccc tgtccaatcc tcgaacaatt tgtatttgag gacctgtggc acggccactg
      841 ccagcgcgaa cgtcgtcaaa gccagatgat ggccggccag ccgcaacgcc ggtagcccga
      901 tcaagaagcc aaagcctgca caaatcaccc cggcaatcgg cagagtaagc caatagggga
      961 cgtcccacgt cgtcatcagg atcgcggtcg tataggcccc gatcgcataa aacgccccgc
     1021 tgccgagcga gatttgcccg ttgaatccaa ccagaatcgc catgccaagg atcgcgaccg
     1081 cgtaaaccac taccatcgtc aactgaaaca ggtggtaacc gctgaagtag acggtcggca
     1141 caatcaacag cagaatgacg aaagcgaccg tagcccagat attcttcatg gcattaaacc
     1201 cggctttgaa cggtgcggcc cagcaggccg gagggtcgga cagtcagcac actgataata
     1261 atgaccagcg ccagcgtcag tttcagctcg gtcccaacga ggtaggcgcc gcccagattt
     1321 tcgatgacgc cgacagcaaa gccgccaaga acggcaccca acgggctgtc gatgccgcca
     1381 agaagcgcac cagcgaaagc atataataaa atgccggcca tcatgttggg atccaggaac
     1441 acgaccggcg ccaccatgca gcccgcgact gatccaattg ctgccgcgag cccccagcca
     1501 agcgccagca tccacccgac ccgcacaccc accaggcggg cggataccgg attgagtgcg
     1561 gccgcccgca tcgcaagacc gagactggtg tggcggaaga acaaatagac cgcggtcagg
     1621 actgccaacg tcacgccggt cgagccaagc tggtggcccg agacatagcc gccaaacagc
     1681 gactcgtcgg ggaacggtga ggggaattgc ttgatcgtgt aatcaaacaa ccagccgctc
     1741 atactgttta cgatcagcag caagccgatg aatacaccga tcgccgatag gatgggcgcg
     1801 ttgaccatcg gccggatcag gacgcgttcg atggctacgc caatacagaa tgacaccgcg
     1861 accgcgagga agaacgccgc ccagtacggc atgccgagat tgatgaacgt caaagtaata
     1921 tacgtcgaaa atgtcgccat ctcgccctgg gcgaaattga tatgatgcgt ggcctggtaa
     1981 atcatcacca aagccagtga gacactcgca taaatcccgc cagtggcgat cccggcgatg
     2041 atctggtgaa ttagtccttc cacggcgagt ttcctttagt aaccaagata ggagcggcgg
     2101 atcgactcgt ccttgctgat atcggcggcc ttgccggata cgacgatgcg gccggtttcc
     2161 aacagatacg catcctcggc aaacgccaaa gcaagactgg cgttttgctc caccagcaag
     2221 atgctgacct tctcttcatc acggatgcgc cgcatgatgt tgaagatctc cttgacgatc
     2281 agcggcgcca gaccaaacga cggctcgtcc aacagcaaca acctcggccg cagcaaaagc
     2341 gcccgcgtga tcgccagcat ttgctgctcg ccgccggaca gcgtgcccgc ctgctggcga
     2401 aaccgttcct tgaggcgggg aaagtagccg aacatccgct cgaagtccgc ttcgacctcg
     2461 cgatctttgc gggtgatcga gccaagccgc atgttttctt cgaccgtcag ttccatgaag
     2521 gtgccgcggc cgtccggcac gtgagcaaca cctcggcgga cgacgtcttc ggtcgccatg
     2581 ccggcgatcg cctcgccgcc aagaatgata tcgccctggg cgcgtaccat gccgcaaatc
     2641 gcacgcaatg tggtggtctt gccggcgccg ttggcaccca acaaagcggt gacgccgcca
     2701 tcctccaccg aaaaatcgat gccgtgcagc accctcgttt cgccgtacgc ggcgtgcagg
     2761 cctttggcct caagcagcgc cggcatgggc ctcgtcctcc tgcgtgtcgc ccagatacgc
     2821 tcggatcact tccggctcgg cgcgcacctc atccggcgtg ccatcggcga tcttgatgcc
     2881 aaattccagc gccacgacct tgtcggaaac gcgcatcacc aggttcatgt gatgctcgac
     2941 cagtagaatg ctgagattga gttgctcccg cacccggcgc atcagcactg cgagctcgtc
     3001 aacctcactg tgattgagtc cgcccgcggg ctcgtcgagc ataagcaact tcggttgtgt
     3061 catcaaagcg cgtgccaact cgacccgttt ttgccagccg aacgggatgg caccagcagg
     3121 tgtatcggtc acctggcgca ggtccagaag atccagcaat tcatacaacc ggcgatctgc
     3181 gtcctcctgc tcccgacgga cgatcggcag gcgcaaagca ttggcaatgt agccggaggt
     3241 tgcggtgctg tgagcgccca ctaaaatatt gtcgcgcacg ctcatggcgc ggaacaaggc
     3301 gacattctgg aatgtgcggc caagcccaat gccggccctg cggtgccggg ggacgttggt
     3361 cagcgacttt ccctcgaaga cgatgtcgcc ttcgttatag cggtagatgc cgctgatgca
     3421 gttgaacagc gtcgtcttgc cggaaccgtt tggcccgatc agcccacaga tctggccgtg
     3481 gtcgacgtcg aacgacacac cgccgagagc gatcacgccg ccgaaccgca tctgcacccc
     3541 agaaatgcgg agcagaggtt gagaggacgc gctggccatc acgcgctgcg tacaggcgtt
     3601 gtcatgtcgc gcatcattgg gcggcttccc atgcgtcccc tcatcttcgt tgtcgcatcc
     3661 cagactgcga gaaattggcg aagcccgcga acagtgtcaa ttgcggactt cgcgccgctt
     3721 tacatggcca gatagccgcc gtcgacataa agttctgcac cggtgatgta ggacgcttca
     3781 tccgaggcca ggaacagaat ggcgttggcg acttcatcga cctcgccgct gcggcccagg
     3841 ggaacggcgc gcagcatttt ggcacgcacg gtggggtcgg cggtggcgcc tgaggtgcgc
     3901 atcggcggca tcaggccggg atgaacggaa ttgcagcgga tattgtcttt gccgaactgc
     3961 acggcggtcg ctttggtcat cgtccgcacc gcgccttttg acgcattgta cgccatgtga
     4021 accatggtct ggccgaccac gcctgaaatc gacgacaggt tcacgatcga tccgccgcca
     4081 ttcttctgca tttgccgcac cgcggcggca gtgccgagga agacgccggt ggaattgact
     4141 tccatcacgc gatgccagat gccggattcc agcaggtcgt tgaccgcgct cccgctgatg
     4201 cccgcgttgt tcacgagaat gtccaggtgg ccgtacagag cgacggtctc ggcgacgacc
     4261 ttgttccagc ccgcttcgtc agtgacattc aacgacatgt atactgccgt gccgccggca
     4321 ttttcgattt caccggcaac gatcttgccc tcgccctcca attgatcggc gatcacgacc
     4381 ttggcacctt ccttggcaaa ccgccgcgcc gtcgcagcgc ccatacccga cgccgcgccg
     4441 ctgacgatcg ccactttgtt ggccaaacgc atggcatctt cctccatttc gagaatttcc
     4501 gggcaacctg ccatgcggtg acgggcttgg ctaccggcca gtaagacgcc agagtgcggc
     4561 aacctttccg gagtcacccc aatggcgcat cgcggtttga aattcggcat cttcctcgcc
     4621 ccgttccaca aagtcggcga gaacccaacc ctggcgatcg gccgcgatgt cgaattgctg
     4681 caatggctcg atgaacttgg ctacgatgag gcatggatcg gcgagcatca ctcggctggc
     4741 tgggaactca ttgcctcgcc cgaactgatc atcgcggcgg ccgcagagaa aaccaaatat
     4801 atcaagttgg gttcgggtgt gacgtcgttg ccgtaccacc acccgttcct ggtggcgcaa
     4861 cgttgggttc agcttgatca catgacccgc ggccgcgcca tgtt
//
LOCUS       DATAVD010000161         2417 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1691248, whole genome shotgun sequence.
ACCESSION   DATAVD010000161 DATAVD010000000
VERSION     DATAVD010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2417
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1691248"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..616)
                     /locus_tag="VHX39_03005"
     CDS             complement(<1..616)
                     /locus_tag="VHX39_03005"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX3990125.1"
                     /translation="MIFAAGLIRGFTGFGLSIAAVPLLSLILPPAQAIPIVLLLQLLV
                     SLSGLRASLQICNWRAVRTLAIGAVIATPLGAWALARLPAAPVRVAIAAAVLCAVFVL
                     ARGFRFKVGPGRLTLPFGLLSGLFNGLAGMPGPPVIAYFLMTPVGTAVARASMIVYFL
                     ATSAFALVPMAAFGLISLRSLAAAAIGFPVVMIGSALGGWMFRSS"
     gene            complement(871..1443)
                     /locus_tag="VHX39_03010"
     CDS             complement(871..1443)
                     /locus_tag="VHX39_03010"
                     /inference="COORDINATES: protein motif:HMM:TIGR04025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX3990126.1"
                     /translation="MAQVTSVEQLEAIYGTPHERSVRKEIAFLNEDYQAFVKASPLVV
                     LASVGDGGTDCSPKGDFPGFVRILDERTLAFPDRPGNNRIDNLRNIVVDPRVSLLFLV
                     PGVDETLRVNGRAEITVDPERLATFQVDGKLPRTVIIIRIDSAYFHCSKALVRSGLWD
                     PEKHVERSLLPRPAAMHKRLSGGAFGAVTA"
     gene            complement(1508..1960)
                     /locus_tag="VHX39_03015"
     CDS             complement(1508..1960)
                     /locus_tag="VHX39_03015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018981205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX3990127.1"
                     /translation="MPSAPDFALYLLVIGAGASLALQQVVNANLRVALASPWWPGFAS
                     YFVGMLLMLVLASFAPGPRLSLAAVSRTTLPAWSGGLFGSIFIITAILTVPRLGAATV
                     LALVVVGQMIGSLTFDQFGLLGLPQQPATLARLAGAGLLIAGVILVRT"
     gene            complement(2004..>2417)
                     /locus_tag="VHX39_03020"
     CDS             complement(2004..>2417)
                     /locus_tag="VHX39_03020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX3990128.1"
                     /translation="RDRCFSLVDLAAMVRAHREGAAVGASGASTVVLHLCAQDTVRDA
                     AERACMSREGFSRSFRRTHGVPPSVFRSMTKLNQARLLLRAGIPLAAVAAEAGFADQS
                     HLGRGFRRTFGVTPGQYRADWNRSHPFQTGARPGF"
BASE COUNT          533 a          758 c          774 g          352 t
ORIGIN      
        1 ggctggaccg gaacatccac ccgccgagcg ccgatccgat catcacgacc ggaaacccga
       61 tcgcggccgc cgcgaggctg cggaggctga tcagaccgaa agccgccatc ggtaccaacg
      121 cgaaagccga ggttgccagg aagtagacga tcatcgatgc acgggccaca gcggtaccca
      181 ccggcgtcat cagaaaatac gcgatcaccg gggggcccgg catgccggca agcccattaa
      241 agagacccga gagcagacca aagggcaaag tgagccggcc gggccccact ttaaagcgaa
      301 agccgcgcgc cagcacgaac acggcgcaga gcacagcggc ggcgatcgcg acgcgcactg
      361 gcgctgccgg cagccgcgcc agtgcccagg caccgagcgg ggtggcgatc accgcgccga
      421 tcgcgagcgt gcggacggcg cgccagttgc agatctgcag cgaggcgcgc aacccgctga
      481 gactgaccag cagttgcagc agcagcacga tcggtatcgc ctgggcgggc ggcaagatca
      541 ggctcagcag cggcaccgcc gcaatgctca agccaaatcc ggtaaagccg cggatcagcc
      601 cggccgcgaa gatcatggcg agcccgcatg cgatctggga cgttaaggac atcgcgtcat
      661 tcagccgggc atttcccggt cgagcctggc atcacaacgc gggtagaaca tgcaaccccg
      721 gagctggctg atgcaacgga acggcaaggc gtgcagcttc gatcccacgc agggctggaa
      781 atttaaccgg caaggcatca gtcaactgat gtagatgagt ggcgcgggac gcatcggcgc
      841 cgatatcgca ttcccgccgc cgttccgcaa ctatgcggtg accgcaccga acgcaccgcc
      901 gctaagacgt ttatgcattg ccgcagggcg gggcaggagg ctgcgttcaa catgtttttc
      961 cgggtcccaa aggccggaac gaaccagcgc cttcgagcaa tgaaagtagg ccgagtcgat
     1021 cctgatgatg ataaccgtac gcggtaattt tccgtcgacc tggaacgtgg cgaggcgctc
     1081 ggggtcgacc gtgatctcgg cgcgtccgtt gacacgcagt gtttcgtcca cgcccggcac
     1141 cagaaacaac agcgataccc gagggtcgac aacgatgttt cgcaaattgt ctattctgtt
     1201 gttgcctggc ctatcgggga aagcgagggt ccgctcatcc agaattctaa caaatcccgg
     1261 aaaatctcct ttgggagagc aatcggtacc gccatcgccc actgaagcca gaacgacgag
     1321 aggcgaagcc ttcacgaagg cctggtagtc ctcgttcagg aaggcgattt ctttccttac
     1381 agagcgctcg tgcggcgttc catagatcgc ctctaattgc tccacgcttg tgacctgcgc
     1441 catacagaac gctcctcgat atatgtggtt cattatgaat tggttatgat gaatggcatc
     1501 gcgccttcta ggtgcggacc aggatcacac ccgcgatcag caatcccgcg ccggcgaggc
     1561 gggccagagt cgcgggctgc tgcgggagcc cgagcaggcc gaactgatcg aaggtcagcg
     1621 agccgatcat ttgcccgacg acgacgaggg cgaggacagt cgcagcaccc aggcgcggga
     1681 cggtgaggat ggcggtgatg ataaagatcg atccgaagag gccgccgctc caagccggca
     1741 aggtcgtgcg cgacaccgcg gcaagcgaca ggcgcggtcc cggggcaaac gaagcgagca
     1801 ccagcatcaa cagcatgccg acaaagtaac tggcgaaccc gggccaccag ggggaggcga
     1861 gtgccacgcg caggttggcg ttcacgacct gttgcaaggc aaggctcgcc ccggcgccga
     1921 taacgagcag gtagagggcg aagtcagggg ctgatggcat aatggactcc caaagggcgc
     1981 gcttcgaggc gcgccgatgg accctagaag ccgggtcgcg cccctgtctg gaacggatgt
     2041 gatcgattcc aatccgctcg gtactgtccc ggcgtgacgc cgaaggtgcg ccgaaagccg
     2101 cggcccagat ggctttggtc agcaaaacct gcctcggcgg cgaccgccgc aagaggaata
     2161 ccggcccgca gcaaaagccg cgcctgattg agcttggtca tggacctgaa cacgctcggc
     2221 ggaacgccat gcgtccgacg aaagctacgc gagaacccct cgcggctcat acaggcgcgt
     2281 tccgccgcgt cacggaccgt gtcctgcgcg cagaggtgca acaccactgt gctggccccg
     2341 ctggcgccaa ccgcggcacc ttcccggtgc gcacggacca ttgcggccag gtccacgagg
     2401 gaaaagcaac gatctct
//
LOCUS       DATAVD010000162         3180 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2622034, whole genome shotgun sequence.
ACCESSION   DATAVD010000162 DATAVD010000000
VERSION     DATAVD010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3180
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2622034"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..438)
                     /locus_tag="VHX39_03025"
     CDS             complement(<1..438)
                     /locus_tag="VHX39_03025"
                     /inference="COORDINATES: protein motif:HMM:NF017454.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
                     /protein_id="HEX3990129.1"
                     /translation="MAIDLLMKFVKGSDPIDAECLASLDPKDRFLEDFKSGKFFEIDE
                     FSFGVGLEDDDSPKSEKHPGTGSSGKEMSRSRTRFDNWLSGERTKAYPVDLEPFSFTR
                     QMDQASPLIFEMCCNSQSFASATLVKRKAAGADVSGHGFLRIDF"
     gene            complement(471..1970)
                     /gene="tssC"
                     /locus_tag="VHX39_03030"
     CDS             complement(471..1970)
                     /gene="tssC"
                     /locus_tag="VHX39_03030"
                     /inference="COORDINATES: protein motif:HMM:TIGR03355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033104 - type VI protein secretion
                     system complex [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     large subunit"
                     /protein_id="HEX3990130.1"
                     /translation="MMLNTDFAALLERDVGVPTQGAPTQGALTQGALTQGALTRTEWC
                     VLADHVQAPDGNPPHRNLRHGNPRRAVESAIAAIDRKLTEQLNLILHHPDFQQMESTW
                     RGLAFLVNAGGNHGTQKIKILDIAKPDLARTLRKFRGSAWDQSPIFKRIYEEEYGQFG
                     GEPFGVLIGDYAFDHSPRDVQLLGDIAQIAAAAHAPFIAAAAPSVMQMESWSELANPR
                     DLTRIFQTPEYAGWRSLRESEDARYLGLCMPRFIARLPYGARTDPVEAFDFEEATDGP
                     DSRNHLWANAAYAMAANVVRAFQTYGWCVRIRGIDTGGVVEDLPVPTFPTADGMVDLK
                     GPVEIALSERREAELAQAGLIPLVHRKHAGSAAFISAQSLQMPHQYDDPAATASANLS
                     ARLPYLFACCRFAHHLKCMVRDKVGSSWDKAQLTEWLQEWLLSYVDGAPDRSNEEWKA
                     AHPLVEARVTLVDREDAPGQYEARFFLRPHYQLEGLTAVLRIVSRLPAS"
     gene            complement(1977..>3180)
                     /gene="tssI"
                     /locus_tag="VHX39_03035"
     CDS             complement(1977..>3180)
                     /gene="tssI"
                     /locus_tag="VHX39_03035"
                     /inference="COORDINATES: protein motif:HMM:TIGR03361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type VI secretion system tip protein TssI/VgrG"
                     /protein_id="HEX3990131.1"
                     /translation="HWSSELNLQPGAVTLNDYNFTTPSADLTSKSLHAGNHNHGSYEM
                     YEYPGPYGTVGDGQKLAAVRMQDFTARRQILNGTSNARALHTGSKFTMSHFIDEAQNR
                     EYLVTGSTCTVELAEGLSDDRGELTDTFRCAFTAIPGDVPFRLDRQTSRPVMHGPQTA
                     KVTGAQGDEITTDQYGRIKVKFFWDRTTVQDENSSCWIRVAQIWAGTNWGGMFIPRVG
                     QEVVVDFLDGDPDRPIITGSVYNANNGVPYTLPDNKTQAGIKTHSSTGSGNNELRFED
                     KAGSEEIFLHAQKDYNKVVLNNETVKITQDTTTTVEKGNRGVTVSQGNDGLTVSTGDH
                     TITVSAGNSTIKAGQSITLQVGGNSIKIDNTGITLTGTMISVTAQESMSADGGLSMTL
                     QAAQIAIN"
BASE COUNT          484 a          980 c         1049 g          667 t
ORIGIN      
        1 gaagtcgatt cgcaggaagc cgtggccgct gacatccgca ccggccgcct tgcgcttgac
       61 cagcgtggcc gaggcgaacg actgggagtt gcagcacatc tcgaatatca gcggtgacgc
      121 ctggtccatc tggcgggtga aagagaacgg ctccaggtcg accggatagg ctttcgtgcg
      181 ttcgccgctc agccagttgt cgaagcgggt ccgcgaccgt gacatctcct tgccggacga
      241 accggtgccg ggatgcttct cgcttttggg tgaatcgtcg tcttccaggc cgacgccgaa
      301 gctgaattcg tcgatttcga agaacttgcc tgacttgaaa tcctccagga agcggtcttt
      361 cgggtcgagg ctcgccaggc attccgcatc gatggggtcg ctgcccttga cgaatttcat
      421 cagcagatcg atcgccatgt tcttctccta tatgttacga atacagtatg ttacgatgcc
      481 ggcaggcggg atacgatgcg cagcaccgcc gtgagacctt cgagctggta gtgtggacgc
      541 aggaagaagc gggcctcgta ctggcccggc gcgtcttccc ggtccaccag tgtgacgcgc
      601 gcctccacca gcgggtgggc agccttccat tcctcgttcg accggtccgg tgcgccatcg
      661 acgtagctca gcagccattc ctgcagccac tcggtcagtt gcgccttgtc ccaggatgat
      721 ccgaccttgt cgcgcaccat gcatttcagg tggtgcgcga agcggcagca cgcgaacaga
      781 tagggcaggc gggcggagag attggcgctc gcggtggccg cggggtcgtc gtactggtgc
      841 ggcatctgca atgactgcgc gctgatgaag gcagccgagc cggcgtgctt gcggtgcacc
      901 agcgggatca gcccggcctg tgcgagctct gcttcccgcc gttcgctcag ggcgatctcg
      961 accgggcctt tcagatccac catgccatcc gcggtcggga aggttggcac cggcaggtct
     1021 tcgaccacgc cgccggtgtc gatcccgcgg atgcgcacgc accacccgta cgtctggaac
     1081 gccctgacaa cattcgccgc catggcatag gccgcattgg cccacagatg gtttcggctg
     1141 tcgggcccgt ccgtcgcttc ctcgaagtcg aatgcctcca ccgggtcggt gcgcgcgccg
     1201 tagggcaggc gggcgatgaa gcgcggcatg cagaggccga ggtagcgggc atcctcgctt
     1261 tcccgcaggc tgcgccagcc ggcgtattcg ggcgtctgga agatgcgggt caggtcgcgc
     1321 gggttggcga gttcgctcca gctttccatc tgcatgaccg acggtgcggc ggcggcgatg
     1381 aagggcgcgt gggcggcggc ggcgatctgc gcgatatcgc ccagcagttg cacatcgcgc
     1441 gggctgtgat cgaaggcgta atcgccgatc agcacgccga agggttcgcc gccgaactgg
     1501 ccgtattcct cttcgtagat tcgtttgaag atcggactct gatcccaggc cgagccgcgg
     1561 aattttcgca gcgtgcgggc aaggtcgggc ttggcgatgt ccaggatctt gattttctgc
     1621 gtgccgtggt tgccgccggc atttaccagg aatgccagtc cccgccacgt gctttccatc
     1681 tgctggaagt cagggtgatg caggatcaga ttcaactgct ccgtcagttt ccggtcgatc
     1741 gcggcgattg cgctttccac tgcacgacgg gggttgccgt gacgcaggtt cctgtgaggc
     1801 gggttgccat ccggcgcctg cacatgatcg gccagcacgc accattccgt tcgtgtcagc
     1861 gccccctggg tcagcgcccc ctgggtcagc gccccctggg tcggcgcccc ctgggtcggc
     1921 accccgacat cccgttccag caatgcggcg aaatcggtgt tcagcatcat gcgtctctaa
     1981 ttgatcgcga tctgcgcggc ctgcagcgtc atcgacaggc cgccatcggc ggacatcgat
     2041 tcctgcgccg tgacggagat catcgtaccg gtcagggtga ttcccgtatt gtcgatcttg
     2101 atggagttcc cgcccacctg cagcgtgatc gactggccgg ccttgatcgt gctgttgccg
     2161 gcggagacgg tgatggtgtg gtcgccggtc gaaacggtga gcccgtcgtt gccctgcgaa
     2221 accgtgacgc cgcggttgcc cttttccacc gttgtcgtgg tgtcctgggt gatcttcacc
     2281 gtttcgttgt tcagcaccac cttgttgtag tccttctgcg cgtgcagaaa gatctcctcc
     2341 gacccggcct tgtcctcgaa gcggagttca ttgttgccgc tgccggtgct ggagtgggtc
     2401 ttgatgccgg cctgcgtctt gttgtccggc agcgtgtagg gcacgccgtt gttggcattg
     2461 tagaccgatc ccgtgatgat cggccggtcc ggatcgccgt ccaggaaatc gaccaccact
     2521 tcctgcccga cgcggggaat gaacatgccg ccccagttcg ttccggccca gatctgtgcc
     2581 acgcggatcc agcaggagct gttttcatcc tgcaccgttg tgcggtccca gaagaacttg
     2641 accttgatcc ggccatactg gtcggtggtg atttcgtcgc cctgcgcgcc ggtcaccttg
     2701 gcggtctgtg gcccgtgcat gaccgggcgc gaggtctgcc ggtccaggcg gaacggcacg
     2761 tcgcccggaa tggcggtgaa ggcgcagcgg aacgtgtcgg tcagttctcc ccggtcatcg
     2821 gacagtcctt cggccagttc caccgtgcag gtcgatccgg tgaccaggta ttcgcggttc
     2881 tgcgcctcgt cgatgaaatg ggacatcgtg aacttgctgc cggtgtgcag ggcccgcgcg
     2941 ttgctggtgc cgttcaggat ctgccgccgg gcggtgaaat cctgcatgcg gacggcggcg
     3001 agtttctggc catcgccgac ggtgccgtag gggccgggat actcgtacat ctcatacgag
     3061 ccatggttat ggttgccggc gtgcagggac ttgctggtga ggtccgcgga tggcgtcgtg
     3121 aagttgtagt cgttcagcgt caccgcgccg ggctgcagat tgagttcgga cgaccagtgc
//
LOCUS       DATAVD010000163         2863 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_200902, whole genome shotgun sequence.
ACCESSION   DATAVD010000163 DATAVD010000000
VERSION     DATAVD010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2863
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200902"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..874)
                     /locus_tag="VHX39_03040"
     CDS             complement(<1..874)
                     /locus_tag="VHX39_03040"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3990132.1"
                     /translation="MAGIEPITGAEFFARSLAANGTTHVFFIDAVLRRTLIELGTLGV
                     TRVLGHSEKAVAYMADGYARIAGRPAVCFAQSVGAANLASGLQDAFLANTPVIAFTGR
                     KPPSMQHRNAYQEIPHQPIFSSVTKLSAFVDSAAELPRLMRQAFRESMTGAPGPAHLD
                     LNGLQADVIETGMVADNPVAEPAFQLAMPPHRPTPSDSEIEHAAATLRAAKKIAIVAG
                     TCAVQSNAGKELLALAEALHAPVATSLGGRGVIPTRHRLSVGCAGNYAAPPANKIVHA
                     AELVLFVGCHTGDQV"
     gene            complement(933..1709)
                     /locus_tag="VHX39_03045"
     CDS             complement(933..1709)
                     /locus_tag="VHX39_03045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HEX3990133.1"
                     /translation="MTAPTPSLLAPDEPVAVRVLREAGASDFLFTADHAGRRIPRSLG
                     NLGVAGSDLERHIAWDIGVAGVTEHLSTALDATAALQTWSRLVIDCNRDPSWPSAIPV
                     LSEFSEIPGNRDLTDAQRGARADAIFHPYHDRIAALIDARAAAGRRTVLVAMHSFTPV
                     FKGESRKLEVGVLYFHKTKLAEIMLDLLRREPDLTVGENAPYALTEASDYSIPFHAER
                     RGLEHVEIEIRQDLIATPDGQAEWANRFSHWFAAALPQLG"
     gene            complement(1720..1962)
                     /locus_tag="VHX39_03050"
     CDS             complement(1720..1962)
                     /locus_tag="VHX39_03050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990134.1"
                     /translation="MGADNFAVEVLPFAAGTVFPVHQRPIRDFGIPLLEGLALRPVAD
                     TGRRSFLFAASPLPVVGGTGSPMAILQHWQYRPCPA"
     gene            complement(2024..2602)
                     /locus_tag="VHX39_03055"
     CDS             complement(2024..2602)
                     /locus_tag="VHX39_03055"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004061 - arylformamidase activity
                     [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEX3990135.1"
                     /translation="MSRDNWDRWGSDDEKGALNHVDAAVVKHAATLVTSGQVISPAQS
                     LSPRTPFPAHRAGMQHFMGRSGGDYAAGARRPGGFQFAEDTLLKPAHIGTHIDALCHA
                     WYDDQLYNRFPCTGTRGTTGATRCGIDRMGPIVTRGLLLDIVAVHGGTLPDGTVIGVD
                     DLVQAVLTASTEPAKADVVLIRTGWADANHWL"
     gene            complement(2599..>2863)
                     /locus_tag="VHX39_03060"
     CDS             complement(2599..>2863)
                     /locus_tag="VHX39_03060"
                     /inference="COORDINATES: protein motif:HMM:NF024591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990136.1"
                     /translation="VLMRHPSVLLAGVVGVPDATQGELIAAFIVPMPGQRITEEALVA
                     HCRELASRYKVPDFIEFRDALPATATGKLLRRDLKTLAADLSK"
BASE COUNT          570 a          857 c          912 g          524 t
ORIGIN      
        1 tcacctgatc gccggtgtgg caaccgacga atagcaccaa ctcggccgcg tgcacgatct
       61 tgtttgccgg cggggcagca tagtttccgg cgcaaccaac cgacaggcga tgccgcgtcg
      121 gaatgacacc gcggccacca agcgaggttg cgacaggagc atgcagcgcc tcggccagcg
      181 cgagcaattc cttcccggcg ttggattgga cggcacaggt accggcgaca atggcgatct
      241 tctttgccgc gcgtaacgtg gccgcggcat gctcgatttc gctgtcagat ggtgtcggac
      301 ggtgcggcgg catggccagt tgaaacgccg gctcggcaac gggattgtcg gcgaccattc
      361 ctgtctcgat cacgtccgcc tgcagtccgt tcagatccaa atgggcgggt ccaggcgcgc
      421 ctgtcatcga ttcgcggaat gcctgacgca ttagccgagg cagctccgcc gcactatcga
      481 caaaggcaga gagtttggtt accgaagaga agatcggctg atgcggaatc tcctgatagg
      541 cattgcgatg ttgcatggag ggaggcttac gaccggtaaa tgcaatgacc ggggtattgg
      601 cgagaaatgc atcctgcagg ccggaggcga ggtttgccgc accgaccgac tgcgcaaagc
      661 acacggccgg acgtccggcg atgcgggcgt agccgtctgc catgtaagcg acggcttttt
      721 cgctgtgacc cagcacgcgg gtgacaccca aagtgccaag ctcgatcaga gtacggcgca
      781 acaccgcatc gatgaaaaac acatgcgtgg tgccatttgc ggcaaggctg cgcgcgaaaa
      841 attcggcacc ggtgatcggt tcgattccgg ccatgtgggt tccctccgtg caattgctcg
      901 gagattaggc tcccgcggac ggaggaacaa tctcagccca gttgagggag tgcggcggca
      961 aaccagtggc tgaaacgatt ggcccattcg gcctggccgt ccggtgtggc gatcaaatcc
     1021 tggcggattt caatttcaac atgctccagc ccgcgacgtt cggcatgaaa cgggatgctg
     1081 taatcgctgg cttcggtgag cgcgtagggc gcattctcgc ctactgtcag atcgggttcc
     1141 cgccgcagca ggtccaacat gatttcggca agttttgttt tgtgaaaata caatacaccg
     1201 acttcaagtt ttctggattc tcccttgaac acgggtgtga aactatgcat tgcgaccagg
     1261 acagtgcgtc tgccagccgc ggcccgcgca tcaatcaacg ccgcgatcct gtcatgatac
     1321 gggtgaaaga ttgcgtcggc gcgcgcgccg cgctgcgcgt ctgtcaggtc acggttgccg
     1381 gggatctcgg aaaattcgct gagcaccggt atggcggatg gccacgacgg atcgcggttg
     1441 caatcgatga cgagacgcga ccaggtctgc aacgcagcgg tggcgtccag cgctgtggac
     1501 aaatgttccg tgacgccggc gacgccgatg tcccaggcga tgtgccgttc caggtctgac
     1561 ccagcgacgc cgagattgcc caacgaacgt gggatccgtc tgccagcgtg gtcggcggtg
     1621 aacagaaaat ccgatgcgcc ggcctcacgc agcacgcgca cggcaacggg ttcgtcggga
     1681 gccagcagcg acggtgtggg tgcggtcatc tcgcgcatct tacgccgggc aagggcgata
     1741 ctgccagtgc tgcaggatgg ccatcggact gccggtaccg ccgacgaccg gcaacgggct
     1801 ggcagcaaac aggaaactac gtcggccggt gtctgcgact ggccgcaacg ccaaaccttc
     1861 gagcaaagga atgccgaaat cccggatcgg gcgttggtgc accgggaaca ctgtgcccgc
     1921 ggcgaacggc agcacctcga ccgcaaaatt atctgcgccc acgaccgcga cctaacgttc
     1981 ggcgagccaa tgtgcagcgg ccaggtcgat cccgggctcg cgctcaaagc caatggtttg
     2041 catccgccca accggtgcgg atcagcacga cgtcagcttt cgcgggctca gtgctggcgg
     2101 tgagtaccgc ttgcaccagg tcgtcaaccc cgatcacggt gccgtctggc aaagttccac
     2161 cgtgcaccgc aacgatatcg agcaacagtc cgcgcgtcac gatcggcccc atccggtcga
     2221 tgccgcaccg tgtggcgccg gtggtgccgc gtgtgccagt acagggaaac ctattgtaga
     2281 gttggtcgtc ataccaggcg tgacagagtg catctatgtg ggtgccgata tgtgcgggct
     2341 tcagcagagt gtcctcggcg aactgaaagc ctccgggacg gcgagcgccg gcggcataat
     2401 cgccaccgga tcggcccatg aaatgctgca tgcctgcacg atgcgctgga aagggcgtcc
     2461 gtggtgacaa agattgcgcc gggctgatca cctgaccaga ggtcaccaac gtagcagcgt
     2521 gcttgaccac agccgcatca acgtgattga gcgcgccttt ttcatcgtca ctgccccagc
     2581 ggtcccagtt gtctcggctc acttcgaaag atccgctgcc agggttttca ggtcgcgacg
     2641 caacagcttg ccggtggcag tggccggcag tgcatcacgg aattcgatga aatccgggac
     2701 tttgtagcgt gacgcgagtt cccggcagtg cgccaccaat gcctcttcgg ttatcctctg
     2761 gcctggcatc ggcacgatga aggcggcgat cagctcgcct tgggttgcat caggtacccc
     2821 gacaactccg gcgaggagga ccgatgggtg gcgcatcaac acg
//
LOCUS       DATAVD010000164         5644 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2622218, whole genome shotgun sequence.
ACCESSION   DATAVD010000164 DATAVD010000000
VERSION     DATAVD010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5644
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2622218"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..270)
                     /locus_tag="VHX39_03065"
     CDS             complement(<1..270)
                     /locus_tag="VHX39_03065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_273701376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UGSC family (seleno)protein"
                     /protein_id="HEX3990137.1"
                     /translation="MVTVLLDPTSEQSPTLRERLPRPERLRGLTVGLLDISKPRGDVF
                     LDRLDARLTELGITVKRYMKPTVARPAPLPLRRQIVGEVNVVIEGL"
     gene            complement(264..1715)
                     /locus_tag="VHX39_03070"
     CDS             complement(264..1715)
                     /locus_tag="VHX39_03070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990138.1"
                     /translation="MPRPVVTLPADGLIAVVKRDCPTCELTAPVLAELAAFGGLTVFT
                     QDDPAFPEAVPHRIDDTSLDVSHALQVEIVPTLIRRADGLDVDRTYGWDRAEWERVSG
                     FQGIGAGLPEFRPGCGALNVEPGTLEDLLVRFEETGLVARRVELGDDEDEFEATFARG
                     WSDGLPVVPPTEKRVLRMLAGTARDPAEVVGLCPPNLAALTVEKVAINAVMAGCKPEY
                     LPVVLAAVEAALDPAFSMHGVLATTMFVGPVLVVNGQVRRQIGMNARGNALGQGNRAN
                     ATIGRALQLIIRNVGGGRPQEVDRATLGNPGKYTYCFAEDEEGSSWEPLSVERGIARD
                     VSAVTVFAGFGLQGVVDQKSRDPESLSRSFAESLKAIHNVKLAPACDAMLVVCPEHER
                     TFRNAGWSKARLYEALYKLCEIPGDQLVAGARGIAEGHSPAVIGTIRNKFRPGGLLIV
                     RAGGGAGMFSGIIGGWSSGGPAGSLPVTREVKS"
     gene            1929..2870
                     /locus_tag="VHX39_03075"
     CDS             1929..2870
                     /locus_tag="VHX39_03075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3990139.1"
                     /translation="MLAYFIRRILATIPVVLTVALFVFSLLYIAPGDPAAIIAGDQAT
                     PEDVDRIRASLGLDRPFLVRFGEWLWHVMHGDLGTSIFTNLSVSHMIAQRIEPTVSLM
                     ALTLILSISVAIPMGVIAAWKHGSLIDRLVMVVAVFGYSTPVFVVGYLLAYLFALQLD
                     WLPVQGFTSITEGVVPFLRNLILPAVALGLIYMALLARITRATMLDVLSQDYVRTAKA
                     KGVAQKGILFVHALKNAAVPIVTTIGIGFATLIGGAVVTESVFAIPGLGRLTVDAILR
                     RDYPVIQGVVLLFSFSYVLVNLAVDLLYTVFDPRIRY"
     gene            2867..3826
                     /locus_tag="VHX39_03080"
     CDS             2867..3826
                     /locus_tag="VHX39_03080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3990140.1"
                     /translation="MSTSVIGAGGHAAAPALPNVLPEPRKRGRITGTIYRHPTIVLGG
                     TVVGIMVLIALLAPCGVTGCRVPFTELRLHLLGTVDPTALAPAKRTRPPSELYWFGTD
                     MLGRDVYSRVIWGSRVSLTIGFSVAAVASIIGTTLGLIAGFTRWVDTIVMRVMDGLMS
                     IPGILLAIALMALTRASMQNVIIAISVSEFPRVCRLVRGVVLSLREQPYVEAAIASGT
                     RIPVIIWRHILPNTLAPLMVQATFICASAMITEATLSFLGAGTPPIIPSWGNIMAEGR
                     ALWQVKPYIVFFPAIFLSITVLAVNMLGDGLRDALDPRLAKRL"
     gene            3826..4815
                     /locus_tag="VHX39_03085"
     CDS             3826..4815
                     /locus_tag="VHX39_03085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3990141.1"
                     /translation="MALLEVENLQTHFATPDGIVRAVEGVSFHVEAGETVAIVGESGC
                     GKSVTSMSILRLIAEPPGKIAGRITFEGRDLLALPEAEMRDIRGNAISMIFQEPMTSL
                     NPVLTVGRQIGETVQLHQGVNSAEAEKKAVEMLTLVGIPAPARRVKEYPHQLSGGMRQ
                     RVMIAMALACNPRLLIADEPTTALDVTIQAQILDLMRDLKTRLGSAIMLITHDLGVVA
                     EMAERVIVMYAGRKVEEAPVLEIFARPLHPYTRGLIGAVPKLGSSLEDGGRGKLAEIS
                     GLVPSLRQRIVGCPFAGRCELATELCRQIAPALEMKADGHWVACHYAERRLAA"
     gene            4812..>5644
                     /locus_tag="VHX39_03090"
     CDS             4812..>5644
                     /locus_tag="VHX39_03090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3990142.1"
                     /translation="MSGNRPLLEVNGLKKHFPIAGGLLGLATGYVYAVDGVSFDISRG
                     ETLSIVGESGCGKSTVGKAILRLFSITEGEVYLDGERIDNMPAAQLRPIRQRVQVVFQ
                     DPFSSLNPRMRVREILAEPITNFGLARGRRAVTEHVEALMDKVRLPRDAINRFPHEFS
                     GGQRQRIGIARALAPGADLIICDEAVSALDVSVKAQIINLLVDLQDELGLALLFISHD
                     LATVEHLTHRVAVMYLGKIVEICDRRTLFSMSHHPYTRALLSAVPVPDPTAKRRRIIL
                     TG"
BASE COUNT          978 a         1761 c         1772 g         1133 t
ORIGIN      
        1 cagcccttcg atgacaacat tcacctcgcc cacgatctgc cggcgtaacg gcaacggcgc
       61 gggcctggca accgtcggct tcatgtagcg cttcacggtg atgccgagtt cggtcagcct
      121 cgcatccagc cgatcgagga aaacgtcccc tcgcggcttg gaaatatcca gcaagccgac
      181 agtcagcccg cgcaaccgct cgggccgtgg cagccgttca cgcaacgtcg gactttgttc
      241 cgacgtcgga tccagtaaga cggtcacgat tttacctccc ttgttacggg cagcgacccg
      301 gcggggccac ccgaagacca gcctccgatg atcccggaga acattccggc tccacccccc
      361 gcccgtacga tcaaaagccc tcctggccgg aatttattgc gtattgtgcc aatcaccgcc
      421 ggactgtggc cctcggcaat gccgcgcgcc ccggccacca gctggtcacc gggaatttcg
      481 cagagtttgt aaagcgcttc gtacagccgc gccttgctcc acccggcatt tcgaaacgtc
      541 cgttcgtgtt cggggcacac taccagcatc gcgtcgcagg ccggcgccag cttcacgttg
      601 tggatcgcct tcagggattc ggcaaaactg cgcgacaggc tttccggatc gcgtgacttt
      661 tgatcgacga cgccttgcag tccgaagccg gcaaacacgg tgaccgcgga cacatcgcgc
      721 gcaattcccc gttctaccga cagcggctcc caactcgagc cttcctcgtc ctcggcaaag
      781 cagtaagtgt atttgccagg attaccaagc gtcgcacggt ccacttcctg tggccgcccg
      841 ccgccgacgt tgcgaatgat cagttgcagt gcgcgcccga tcgtggcgtt ggcgcgattg
      901 ccctgcccca gagcgttgcc gcgggcgttc atgccgatct gacgacggac ctgcccgttc
      961 accaccagca cgggtcccac gaacatcgtc gtcgccagca cgccatgcat ggaaaacgcc
     1021 gggtcgagcg ccgcctccac tgccgccagc acaaccggca gatattcggg tttgcagccg
     1081 gccatcaccg cattgatggc gactttttcc acagtcagtg ccgcgagatt aggcggacac
     1141 agaccgacca cttccgcggg atcgcgagcc gtgcccgcga gcatgcgcaa cacgcgtttc
     1201 tcggtcggcg ggaccaccgg cagcccgtcc gaccagccgc gcgcaaaggt tgcctcgaat
     1261 tcatcctcat cgtcaccgag ttcgacgcgg cgggcgacaa ggccggtttc ttcgaagcgg
     1321 acaagtaagt cttccagggt gccgggctcg acgttcaacg cgccacagcc gggccgaaac
     1381 tccggcaaac cggcgccgat gccctggaaa ccgctgacgc gttcccattc ggcccgatcc
     1441 caaccatagg tgcggtcgac atccagccca tcggcgcgac ggatcaaggt cggaacaatc
     1501 tcgacctgca aggcgtgcga gacgtcaagc gaggtgtcgt cgatccggtg cggcaccgcc
     1561 tcgggaaacg ccggatcgtc ctgggtgaat accgtcaatc cgccgaaagc ggcgagttcc
     1621 gccagcaccg gcgcggtcag ttcacaggtc gggcaatctc gcttgaccac cgcgatcagg
     1681 ccgtcggcgg gcagcgttac caccggtctc ggcacatgag cctcgtctga cgtgtgaggg
     1741 catacggtaa ctccgatgcc catcgcggtc cagccttggt ggcactggaa ttgcatcgcg
     1801 acctcaggca ggctaaccgt ttccggcgcc ggcgcggcat cacgactgac caggaatgca
     1861 aaacccaatg cggcgacgca accttctgcg tactacggaa agcagccggg ccttgagcct
     1921 aacctgacat gctggcgtat ttcatccggc gcattctcgc caccatcccc gtcgttctga
     1981 ccgtggcgct gttcgtattc agcctgcttt acattgcccc tggcgatccg gcggcaatta
     2041 ttgccggcga tcaggccacc cccgaggatg tggaccggat ccgtgcctcg cttggcctgg
     2101 accggccatt cctggtgcgc tttggcgagt ggctgtggca cgtcatgcac ggcgatctcg
     2161 gcacctcgat cttcaccaac ctgtcggtca gtcacatgat cgcacagcgg atcgagccga
     2221 ccgtctcgct gatggcgttg acgctgatcc tgtcgatcag cgtggccatt ccgatgggcg
     2281 tgattgcggc ctggaagcac ggctcgctga tcgaccggct ggtgatggtg gtggcggtgt
     2341 tcggctattc gacgccggtg ttcgtcgtcg gttatctgct ggcgtatttg ttcgcgctgc
     2401 aactggactg gctgccggtg cagggcttca cctcgatcac cgagggcgtc gtgccgtttc
     2461 tgcgcaacct gatcctgcct gcggtggcgc ttggtttgat ttacatggcg ctgctggcgc
     2521 gcattacccg cgccacgatg ctggatgtgc tgtcgcagga ctatgtgcgt accgcgaaag
     2581 cgaaaggcgt cgcacagaaa ggtatccttt tcgtgcacgc actgaagaac gccgcggtcc
     2641 cgatcgtcac caccatcggc attggcttcg cgacgctgat cggcggcgcc gtggtgaccg
     2701 agagcgtgtt tgccattccc ggcctcggcc ggctgacggt ggatgcgatc ctgcgccggg
     2761 actacccggt catccagggc gtcgtgctgc tgttcagctt tagttatgtg ctggtcaacc
     2821 tcgccgtgga cctgctgtat accgtatttg acccgaggat ccgctattga gcacttccgt
     2881 catcggtgcc ggcggccatg ctgcggcacc cgctctgccc aacgtgttgc ccgagcccag
     2941 gaaacgcggc cgcatcacgg gcacgatcta tcgccatccg acgatcgtac ttggtggcac
     3001 ggtggtcggc attatggtgt tgattgcgct gctcgcgccc tgcggcgtga ccggatgccg
     3061 ggtgcccttc accgagcttc ggctgcattt actgggcacg gtcgatccga ctgcgttggc
     3121 tcccgccaag cgcacaaggc cgccgtcgga gctgtactgg ttcggcaccg acatgctcgg
     3181 ccgggacgtt tattcgcggg tcatctgggg ctcgcgcgtg tcactgacaa tcggcttttc
     3241 ggttgcggcg gtggcctcga tcatcggcac cacgcttggc ctgatcgccg gctttacgcg
     3301 ctgggtcgat accatcgtga tgcgggtcat ggacgggctg atgtcgatcc ccggcattct
     3361 gctcgccatt gcgctgatgg cactgacccg ggcctcgatg cagaacgtca tcatcgcgat
     3421 ttcggtgtcc gagttcccgc gcgtctgccg gctggtgcgc ggagtggtgc tgtcgttgcg
     3481 cgagcaacct tatgtcgaag cggcaatcgc ttcgggcacg cgaatcccgg tgatcatctg
     3541 gcggcatatc ctgcccaata cgctggcgcc gctgatggtg caggcgacct tcatctgcgc
     3601 ctcggcgatg attaccgaag cgactttgtc gttccttggg gccggcacac cgccgatcat
     3661 ccccagttgg ggcaacatca tggccgaggg ccgcgcgctg tggcaggtca agccatacat
     3721 cgtgttcttc ccggcgattt tcctgtccat cacggtgctg gccgtcaaca tgttgggtga
     3781 cggactgcgg gacgcgctcg atccgcggct ggcgaaacgg ctctgatggc gcttctcgaa
     3841 gtcgagaatc tgcaaaccca tttcgccacg ccggacggca tcgtccgcgc ggtggagggc
     3901 gtgtcgttcc acgtcgaggc cggcgaaacc gtggccatcg tcggcgaatc aggttgcggc
     3961 aagtcggtca cctcgatgtc gatcctgcgg ctgattgccg agccaccggg taagattgcc
     4021 ggccgcatta ccttcgaagg gcgcgacctg ctggcattgc ccgaggcgga aatgcgtgac
     4081 attcgcggca atgccatctc gatgattttt caggagccga tgaccagtct taaccctgta
     4141 ctgacggttg gcaggcagat cggcgagacg gtgcagttgc atcagggtgt aaattctgcc
     4201 gaggccgaga aaaaagcagt cgagatgctg actttggtcg gcatccctgc cccggcgcgg
     4261 cgcgttaaag aatatccgca ccagctttcc ggcggcatgc ggcagcgggt gatgatcgcc
     4321 atggcactgg cctgcaatcc tcggctgctg atcgctgacg aaccgacgac ggcactggat
     4381 gtaacgatcc aggcacaaat tctcgatctg atgcgcgatc tgaagacacg gctcgggtcg
     4441 gcgatcatgc tgatcacaca cgatctcggc gtggtcgcgg aaatggccga acgggtgatt
     4501 gtcatgtacg ccgggcgcaa ggtcgaagag gcgccggtac tggaaatttt tgcgcgtcca
     4561 ctgcaccctt acacacgcgg gctgatcggt gcggtgccca aactggggtc ctcgctggag
     4621 gacggtgggc gcggcaaact ggcggagatt tctggcctgg tgccgagttt gcgacagcgg
     4681 attgtggggt gcccgtttgc gggacgctgc gaactggcga ccgagctgtg ccggcagatc
     4741 gcgccggcac tcgaaatgaa agccgacggg cactgggttg cctgtcatta cgccgagcgg
     4801 cggctggcag catgagcggc aaccggcctt tgctcgaggt caatggtctc aagaaacatt
     4861 ttcccattgc cggtggttta ctgggcctgg ccaccggcta tgtttacgcc gtcgatggcg
     4921 tcagtttcga catcagcagg ggcgagacgc tgtcgatcgt gggcgaatcc ggctgcggca
     4981 aatcgacggt gggaaaagcg attttacggc tgttttcgat caccgaaggc gaagtttatt
     5041 tagacggaga gcgtatcgat aatatgccgg cagcccagtt gaggccgatt cggcagaggg
     5101 tgcaggtggt gtttcaggat ccgttcagca gcctcaatcc acgcatgcga gtgcgggaga
     5161 ttctggccga gccaatcacc aactttggcc tggcgcgtgg ccgccgtgcg gtgaccgaac
     5221 acgtcgaggc gctgatggac aaggtccggc tgccacgtga cgccatcaac cggtttccgc
     5281 acgagttctc cggcgggcag cggcagcgga tcggcattgc ccgggcgctg gcgcctgggg
     5341 cggatctgat catctgtgat gaggcggtct cggcactgga cgtctcggtc aaagcccaga
     5401 tcatcaattt gctggtggat ttgcaggatg aactggggtt ggcactgctg ttcatcagtc
     5461 atgacctggc gacagtcgag catctgacgc atcgcgtggc agtgatgtat ctgggcaaaa
     5521 ttgtcgagat ttgcgatcgg cggacgcttt tctcgatgtc gcaccatccg tatacgcggg
     5581 cgctgttgtc ggcggtgccg gtgcccgatc cgacagcgaa acggcggcgg attatcttga
     5641 ccgg
//
LOCUS       DATAVD010000165         4267 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1691733, whole genome shotgun sequence.
ACCESSION   DATAVD010000165 DATAVD010000000
VERSION     DATAVD010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4267
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1691733"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..898)
                     /locus_tag="VHX39_03095"
     CDS             complement(<1..898)
                     /locus_tag="VHX39_03095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HEX3990143.1"
                     /translation="MPPAILKSRINEGSPHQRGATWDGLGVNFSLFSANATKVELCLF
                     DDSGERELERIELPEYTNEVWHGYLPDARPGTTYGYRVYGPYEPEAGHRFNPNKLCLD
                     PYAKAHVGTLQWDPAIFGYVMGQDDLTFDERDSARFMPKSRVIDPAFTWGRERPPSVP
                     WDRTIVYETHVRGYTMLHPAVPKHLRGTFAGLGRKEVVDYIKTLGVTSVELLPVHTFV
                     NDSHLLEKGLTNYWGYNSIGFFAPDPRYSAVPDFVFSEFKEMVARLHDAGLEVILDVV
                     YNHTAEGNENGPTLSFRGIDNLS"
     gene            complement(969..1199)
                     /locus_tag="VHX39_03100"
     CDS             complement(969..1199)
                     /locus_tag="VHX39_03100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HEX3990144.1"
                     /translation="MNDRVEGTVREFGGRVQEAVGNATGDAKTQAQGLYNQAAGQAQQ
                     AASQLSDVVKAQPILASLAALGIGYMLGRLTS"
     gene            1229..2077
                     /locus_tag="VHX39_03105"
     CDS             1229..2077
                     /locus_tag="VHX39_03105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HEX3990145.1"
                     /translation="MNAPERFGLHGIVLICRPSMAPPRRGQLGPAPLLDVMREQEPGC
                     RVAETGYAGGMLDIPPEALADDLAAQGYATRALLTAETCRTLAESYDDDRRFRKRIVM
                     EQHAYGKGEYKYFAYPLPDPVAVLRAALYPPLAMVANAWRRTLGETEMFPATLDSYLA
                     RCHAAGQTRPTPLLLRYGAGGFNCLHQDLYGDLVFPLQVTVLLNEPGVDFTGGEFVMV
                     EQRPRAQSRAMVVPLGLGEAVIFPVHHRPGVGTRGPYRLTMRHGVSRIHTGKRHTLGV
                     IFHDAA"
     gene            complement(2142..3761)
                     /locus_tag="VHX39_03110"
     CDS             complement(2142..3761)
                     /locus_tag="VHX39_03110"
                     /EC_number="1.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="choline dehydrogenase"
                     /protein_id="HEX3990146.1"
                     /translation="MAAETYDYIVTGAGSAGCVLAARLSESGRYKVLLLEAGGKDNKF
                     WIHVPMGYAKTFVDPKVNWKFESEPEQELNNRTMYQPRGKVLGGTSSINGMIYMRGNA
                     ADYDQWRQLGNQGWDYDSVLPYFRKAEDNERGADDFHGSGGPLRVSNQPYEWEIAKAL
                     LEACQQAGIPYNPDFNGAKQEGCGYYQTTTKDKRRWSTAAAYLRMAKGRPNLTIRTNA
                     HATRVLFDGTKATGVEFRTPQGMQTAHAGREVIVSGGAYGSPQLLQLSGVGPAQHLTE
                     TGIAVVHDMPGVGSNLQDHFNTYCTYRISKNLSLNALQYSLPHRLAAGAKYVFLRSGP
                     MSGNGMYVGALVRSDKRLERPDLQFNISAWSTIDRTADGIISHPFPGISISPVHLAPE
                     GRGSVRLRANDPFAPPEIKFNFLRSENDMRVMIAGVRIARSIARQHALQRLMMGETAP
                     GVAVHSDEDIAADVRQRGVSNLHPVGTCGMGSGPMAVVDPRLRVHGMTGLRVVDASIM
                     PVIVAGNTNAPTIMIAEKASDMIQEDARAAA"
     gene            complement(3797..>4267)
                     /locus_tag="VHX39_03115"
     CDS             complement(3797..>4267)
                     /locus_tag="VHX39_03115"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HEX3990147.1"
                     /translation="LRPEGRGTVRLGSPDPFAWPAVLFDYLRTDYDIQAALFGIRLVR
                     KIAAQPALQPYVVGELSPGSEITTDEDLLDFIRRTGVSNQHPTSSCAMGNGPTTVVDP
                     RLRVHGIAGLRVADASIMPVVVGGNTNAPTIMIGEKAATMILEDTRAGAPSLAA"
BASE COUNT          656 a         1192 c         1564 g          855 t
ORIGIN      
        1 aggacaggtt gtcgatgccg cggaacgata gggtcgggcc gttttcgttg ccctccgcgg
       61 tgtggttgta aaccacgtcc aggatgactt cgaggccggc gtcgtgcagg cgcgcgacca
      121 tttccttgaa ttcggaaaac acgaagtccg ggacggcgga atagcgcggg tcgggggcaa
      181 agaagccgat cgagttgtag ccccagtagt tggtcaggcc cttttccagc aggtggctgt
      241 cgttgacgaa tgtatggaca gggagaagtt ccaccgaggt gacgccgagg gtcttgatgt
      301 aatccaccac ctccttgcgg ccgaggccgg cgaaggtgcc gcgcaggtgc ttgggcacgg
      361 cggggtgcag catggtgtag ccacgcacat gggtctcata cacgatcgtc cggtcccagg
      421 ggaccgatgg cgggcgttcg cggccccagg tgaaggcggg atcgatcact ctggacttcg
      481 gcatgaagcg ggcgctgtcg cgttcgtcga atgtcaggtc atcctggccc atgacgtagc
      541 cgaagatcgc gggatcccac tgaagcgtgc cgacatgcgc cttggcgtag gggtcgaggc
      601 acaatttgtt ggggttgaag cggtggccgg cttcgggttc gtaggggccg taaacgcgat
      661 agccgtaggt ggtgccgggg cgggcgtcgg gcaggtagcc gtgccagacc tcgttggtgt
      721 attcgggcag ttcgatccgc tccagttctc tttctcccga atcgtcgaac aggcagagct
      781 cgacttttgt cgcgttggcg gagaacagcg aaaaattgac tccgagaccg tcccatgtcg
      841 cgccccgttg atggggggac ccttcattga tgcgggattt caagattgcc gggggcatgg
      901 ggacctctct ctttgcgacg cgggcacaaa aaagggggcg tgaacccccg ttttctgatc
      961 cgctgatgtc aggatgtcag gcgcccgagc atgtagccga tcccgagggc ggcgagcgag
     1021 gcgagaatgg gttgggcttt cacgacatcg ctcaattgtg aggctgcctg ctgggcttgg
     1081 ccggctgcct ggttgtacag gccctgggcc tgggttttgg cgtcgccggt tgcattgccg
     1141 acggcttcct gcacacggcc gccgaattca cggacggtgc cttcaacgcg atcattcatt
     1201 ccagcctcct ttgctgatgg ggaggtgggt gaacgcgccg gagcgatttg ggttgcatgg
     1261 gatcgtgctg atttgccgcc cgtccatggc gccgcctcgg cgaggacagc ttgggccggc
     1321 accgcttctt gacgtcatgc gggagcaaga accgggatgc cgggtggcgg aaaccgggta
     1381 tgctgggggg atgttggaca ttcctcccga agccctggcg gacgatctgg ccgcgcaggg
     1441 ttatgcgacg cgggcgctgc tgacggcgga gacgtgtcgc acgctggccg aatcgtatga
     1501 cgatgacagg cggtttcgta agcggatcgt gatggagcag cacgcctacg gcaaggggga
     1561 atacaaatat ttcgcctatc cgctgcctga tccggtcgcg gtgttgcggg cggcgctgta
     1621 tccgccgttg gcgatggttg cgaatgcgtg gcgtcgcacg ctgggggaga cggagatgtt
     1681 tcccgccacg ctggactcct atctggcacg ctgccatgcg gcggggcaga cgcggccgac
     1741 tccgttgctg ctgcgctatg gcgcgggcgg tttcaattgt ctgcaccagg atctgtatgg
     1801 ggacctggtg tttccgctgc aggtcaccgt gctgttgaac gaacccgggg tggatttcac
     1861 cggcggcgag ttcgtcatgg tggagcagcg gccgcgtgcg caatcgcgag cgatggtggt
     1921 gccgctggga ttaggggagg cggtgatttt tccggtccac catcgcccgg gggttggcac
     1981 gcgggggccg taccggttga cgatgcggca tggggtgagc cggattcaca ccgggaagcg
     2041 gcatacgttg ggggtgattt tccacgacgc ggcgtagcgg gcggggttgg cgacggaaaa
     2101 gtcgtacgcg gccgtgccaa gcccacccat ggctctaaca ttcaggcggc ggcgcgggca
     2161 tcctcctgga tcatgtcgga ggctttttcg gcgatcatga ttgttggggc gttggtgttg
     2221 cccgccacga tcaccggcat gatggaggcg tcgaccacgc gcaggccggt catcccgtgc
     2281 acgcgaagtc gcgggtcgac caccgccatc gggccgcttc ccatgccgca ggtgccgacc
     2341 ggatgcaggt tcgacacgcc gcgctgacgg acgtcggcgg cgatgtcctc atcggagtga
     2401 acggcgacgc cgggcgcggt ttcgcccatc atcagccttt gcagcgcgtg ctgacgggcg
     2461 atacttcgcg cgatgcggac gccggcgatc atcacgcgca tgtcgttctc gctgcgcagg
     2521 aagttgaatt tgatctccgg tggggcgaac gggtcgttgg cacgcagacg gacgctgccg
     2581 cggccctcgg gggcgagatg gacggggctg atggagatgc ccgggaacgg atgcgagatg
     2641 atgccgtcgg cggtgcggtc gatcgtgctc caggcggaga tgttgaattg caggtccggg
     2701 cgttccaggc gtttgtcgct gcgcaccagc gcaccgacat acatgccgtt gccggacatt
     2761 ggtccggacc gcaggaacac gtattttgca ccggcggcca ggcggtgcgg caggctgtac
     2821 tgcagcgcgt tcagcgacag gttcttcgag attcggtagg tgcagtaggt gttgaagtgg
     2881 tcttgcaggt tggacccgac gcccggcatg tcatgcacca cggcgatgcc cgtctcggtc
     2941 agatgctggg cgggtccgac gccggatagt tgcagcagtt gcggtgaacc gtaggcaccg
     3001 ccggagacga tgacctcgcg gcccgcatgg gctgtttgca ttccttgcgg ggtgcggaat
     3061 tcgacgccgg tggccttggt gccgtcgaac aggacgcggg tggcgtgcgc gttggtgcgg
     3121 atggtgaggt tcggacggcc tttcgccatg cgcagataag cggcggcggt gctccagcgg
     3181 cgtttgtcct tggtggtggt ctggtagtag ccgcagccct cctgtttggc gccgttgaaa
     3241 tcggggttgt acgggatgcc ggcctgctgg caggcttcca gcagggcctt ggcgatttcc
     3301 cattcgtacg gctggttgga tacgcgcagc gggccgccgg acccgtggaa gtcgtcggcg
     3361 ccgcgttcgt tgtcctcggc tttgcgaaaa tacggcagga cagagtcgta gtcccagccc
     3421 tggttgccga gttgccgcca ctggtcgtag tcggcggcgt tgccgcgcat gtagatcatg
     3481 ccgttgatgg agcttgtgcc gcccagcact ttgccgcgcg gctggtacat ggtgcggttg
     3541 ttgagttcct gttccggttc ggactcgaat ttccagttca ctttcggatc gacgaaggtc
     3601 ttggcgtagc ccatcgggac gtggatccag aacttgttgt ccttgccgcc ggcttccagc
     3661 agcaggacct tgtagcggcc ggattcgctc aggcgcgcgg ccaggacgca gccggccgaa
     3721 ccggcgccgg tcacgatgta gtcgtaggtt tcagccgcca cgttccgttt ctccgtctta
     3781 ttatgtttgg cgaatgttac gcggccaggg agggcgcgcc agccctggtg tcctccagga
     3841 tcatcgtggc ggctttctcg ccgatcatga tggtgggggc gttggtgttg ccgcccacga
     3901 cgaccggcat gatggaggcg tcggcgaccc gcaggccggc gatgccatgc acgcgcagcc
     3961 gtggatcgac cacggtggtc gggccgttgc ccatggcgca ggagctggtg gggtgctggt
     4021 tggacacgcc ggtgcggcgg atgaagtcca gcaggtcttc gtcggtggtg atttccgaac
     4081 ccggcgacag ttcgcccacg acgtagggtt ggagcgcggg ctgggcggcg atcttgcgca
     4141 ccaggcggat gccgaacagg gcggcctgga tgtcgtagtc ggtgcgcagg tagtcgaaca
     4201 ggaccgccgg ccaggcgaac ggatcgggac taccgagccg gacggtgcct cggccttcgg
     4261 ggcggag
//
LOCUS       DATAVD010000166         3178 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1131707, whole genome shotgun sequence.
ACCESSION   DATAVD010000166 DATAVD010000000
VERSION     DATAVD010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3178
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1131707"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..472
                     /gene="xoxF5"
                     /locus_tag="VHX39_03120"
     CDS             <1..472
                     /gene="xoxF5"
                     /locus_tag="VHX39_03120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lanthanide-dependent methanol dehydrogenase
                     XoxF5"
                     /protein_id="HEX3990148.1"
                     /translation="VSYTAGQPYVGATLAMFPPPGETNMGNFIAWDARTGKIVWTDHE
                     QFSVWSGALATKGGVVFYGTLEGYLKAVDAKTGKELYRFKTPSGIIGNVMTYEHGGKQ
                     YVAVLSGVGGWAGIGLAAGLTDPHAGLGAVGGYAALSNYTALGGTLTVFALPSN"
     gene            557..1081
                     /locus_tag="VHX39_03125"
     CDS             557..1081
                     /locus_tag="VHX39_03125"
                     /inference="COORDINATES: protein motif:HMM:TIGR03874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome, methanol metabolism-related"
                     /protein_id="HEX3990149.1"
                     /translation="MRHFSRVAVAAAVTLLLSSAVVYAVVDGSGDPTAVTSDDGKWSD
                     KDGNPTFKVAPDGTVDWYTNVGFIRYSSECLRCHGPDGMGSTYAPPLIESMKRLSYTD
                     FLAVVAGGKKDVSASQELVMPANGENKNVMCFVDAIYIYLRARADDAVGRGRPEKHAP
                     KPDSFTKAEDECMG"
     gene            1078..1920
                     /locus_tag="VHX39_03130"
     CDS             1078..1920
                     /locus_tag="VHX39_03130"
                     /inference="COORDINATES: protein motif:HMM:TIGR03871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX3990150.1"
                     /translation="MREHRFRMMALALVAALVISQIAIAQSPGLGESAELVDPKTFRV
                     CADPRNLPFSDEAGKGFENKLAELFASKLAEPVSYTYYPQVIGFVRNTLNALRCDVVM
                     GAAVGDDLMQTSVPYYHTTYALVFKPGSGLDGIDSLEDPRLKTRHIGIVAGTPPATIL
                     AEQGLMLLAKPYALTVDTRIDAPTQTMVDDIESGTIDIGVLWGPIAGYRAQNANPRLS
                     VVPLLKEHERMDFRIALGVRHSDQEWKRKLNRLITENRAEIDRILTDYGVPLLDDQGN
                     LVVP"
     gene            1917..2474
                     /locus_tag="VHX39_03135"
     CDS             1917..2474
                     /locus_tag="VHX39_03135"
                     /inference="COORDINATES: protein motif:HMM:TIGR03865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent catabolism-associated CXXCW motif
                     protein"
                     /protein_id="HEX3990151.1"
                     /translation="MNRIAAALAVTMLLGAAGDPGQPTEPSGFRNDNYRSPVPATLHG
                     AVVLTTEEARAKWQDHAAAFIDVLPQPPKPAGLPAATIWRPKPRQDIPGSVWLPDTGY
                     GALAPVMADYFDRGLRQATGNDRDRAVVFYCLANCWMSWNAAKRAIAMGYRHVAWYPG
                     GTDGWIAAGQPLETRTPEPRPQASE"
     gene            complement(2477..>3178)
                     /locus_tag="VHX39_03140"
     CDS             complement(2477..>3178)
                     /locus_tag="VHX39_03140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990152.1"
                     /translation="RREIDPGWAAALGCSCVAEMSVVGKPPRRCLRLVLAMLLIAGTL
                     DVTAQAAPPGPSDPDWPCQQIKVPRLSLAAIWSGPSPEQQQTEWRTDQAVADMVRETA
                     QRRMPIEQAQNAIHDFARATLDKQPKLLELLTGLFSVLDDERASVIAGLDRFGARQRE
                     LAANLRDDNAKLSALQSEPSPDASEVNQMTQKVTWGAEVFQDRRRSLSYACEVPGKIE
                     HRLFALARIIQSELP"
BASE COUNT          611 a          943 c         1007 g          617 t
ORIGIN      
        1 cgtatcgtac accgccgggc agccctatgt cggcgcaact ttggcaatgt tcccgccgcc
       61 cggcgagacc aacatgggca atttcatcgc ctgggatgcc cggaccggta agatcgtgtg
      121 gactgatcac gagcagttct cagtatggtc gggtgcgcta gcaaccaaag gcggtgttgt
      181 gttttacggc acgctcgagg gctacctgaa agcggtcgat gcgaagaccg gcaaggaact
      241 gtaccggttc aagacgccgt caggcattat cggcaatgtc atgacctatg agcatggcgg
      301 taagcagtat gtcgcggtgt tgtcgggagt cggcggttgg gccgggatcg gcctcgcggc
      361 tggtctcacc gatccacatg ccggactggg cgcggttggc ggatacgccg ctctcagcaa
      421 ctacacagcg cttggcggca cgctcacggt gtttgcgctg ccgtcgaatt gacctcgact
      481 ggaacgcagc gatctggtgg ccggcgccga agctcaggct ttggcgccgg cttctgtctg
      541 gcccaggaac gataatatgc gacacttctc gcgtgtggcg gtcgcggctg ccgtgactct
      601 gttgctgtct tcggcagtgg tttacgccgt tgtcgacggc tcgggcgatc cgacggcggt
      661 cacgtccgac gatggtaaat ggagcgataa ggacggcaat ccaaccttca aagtcgcacc
      721 ggatggcacg gtcgactggt acaccaacgt tggtttcatc cgctattcct ccgagtgcct
      781 gcgttgccat ggtcccgacg gaatggggtc gacgtacgcg ccgccgctga tcgagtcgat
      841 gaagcggctc agttacactg acttcctcgc ggtcgttgcg ggcggcaaga aggatgtgtc
      901 tgcgtctcag gaattggtga tgccggccaa cggcgagaac aagaatgtca tgtgtttcgt
      961 ggatgcgatc tatatctatt tgcgtgcgcg ggccgacgat gccgtcggtc gcggccgtcc
     1021 ggaaaagcat gcgccgaaac ccgattcatt taccaaggca gaggatgaat gcatgggatg
     1081 agagagcaca ggtttcgcat gatggcattg gcgctggtcg cagcgctggt catctcccaa
     1141 atcgcgatcg cccagtcccc tgggctcggt gaatcggcgg aactcgtcga tccaaaaaca
     1201 ttccgggtgt gcgcggatcc ccgcaatctg ccgttctccg atgaagccgg caaaggattc
     1261 gaaaacaaac tggcggaact gttcgcgagc aagctcgcag agccggtgag ctacacctat
     1321 tacccacagg tgatcgggtt cgtccgtaac acgttgaatg ccctgcgctg cgatgttgtg
     1381 atgggcgcgg cagtcggcga cgacctgatg cagaccagcg tgccgtatta tcacacgacc
     1441 tacgcgcttg ttttcaaacc aggcagtgga ctggacggca tcgactcgct ggaggatcca
     1501 cggctgaaga cccgccatat cggcatcgtc gccggcacac cgccggcgac gatcctcgcc
     1561 gagcaagggt tgatgttatt ggcaaaaccc tatgcgctga ccgtggatac gaggatcgat
     1621 gcgccgaccc aaacgatggt cgacgacatc gaaagcggaa cgatcgacat cggtgtgttg
     1681 tggggcccga tcgccggata ccgcgcacaa aacgccaatc cccgcctctc cgttgttcca
     1741 ctcttgaagg agcacgagcg catggatttc cgcattgccc tgggcgtgcg ccacagcgat
     1801 caggaatgga aacggaaact caatcggctg atcaccgaaa accgggccga aatcgatcgc
     1861 atcctgacgg actacggcgt gcctctgttg gatgaccagg gcaatctggt ggtgccgtga
     1921 accgcatcgc cgcagcactc gctgtcacga tgctgttggg tgccgccggg gatccaggtc
     1981 agccgaccga accgtcaggt tttcgcaacg ataactaccg atctccggtt ccggccacgt
     2041 tgcacggggc agtcgttctg acgaccgaag aagcccgggc gaaatggcaa gatcacgccg
     2101 ccgcgttcat cgatgtgttg ccacagccgc cgaaacccgc cggtctgccg gccgcaacga
     2161 tctggcgacc gaaaccgcgc caggacattc cgggaagtgt gtggttaccg gacaccggtt
     2221 acggtgcatt ggcgccggtc atggcggatt atttcgaccg aggtctgcgg caggcaaccg
     2281 gcaacgatcg agaccgcgcg gtcgtgttct attgtctggc gaattgctgg atgtcgtgga
     2341 acgccgcaaa gcgcgcgatc gccatgggct acaggcatgt cgcctggtat ccgggtggca
     2401 ccgatggttg gattgcggcg ggccagccac tcgagacccg tacgcccgaa ccgcggccgc
     2461 aagcctcgga atgacgtcag ggcaattcgc tttgaatgat gcgggctaac gcgaacaggc
     2521 ggtgctcgat cttgccaggc acttcacagg catagctcaa cgaccgccgg cggtcctgga
     2581 agacttcagc gccccaagtg accttttgcg tcatctggtt gacctcgctt gcgtcaggcg
     2641 acggttccga ctgcagcgcg ctgagcttcg cgttatcgtc gcgtagattg gcggcgagtt
     2701 cccgctgacg ggcgccgaac cggtccagtc ccgcaatcac cgaggctcgt tcgtcgtcga
     2761 gcacgctgaa cagaccggtg agcaattcaa gcaacttcgg ctgtttatcg agagtcgcgc
     2821 gcgcaaagtc gtgaatggcg ttttgcgctt gctcgatggg catgcggcgt tgcgcggttt
     2881 ctcgcaccat gtcggcgacg gcctggtcgg ttcgccattc ggtctgctgt tgctccggcg
     2941 acgggccgga ccagatcgcg gcgagcgaca gccgcggaac tttgatttgc tggcacggcc
     3001 agtccgggtc ggacggtcct ggcggcgctg cctgcgccgt aacatccagt gttcctgcga
     3061 tcagcagcat cgccagcacc agtcgaaggc aacggcgcgg gggcttgcca acgacactca
     3121 tttcggcgac acaactacac cccaaggcag ccgcccaacc gggatcgatt tcacgacg
//
LOCUS       DATAVD010000167         3943 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_16020, whole genome shotgun sequence.
ACCESSION   DATAVD010000167 DATAVD010000000
VERSION     DATAVD010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3943
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16020"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1259
                     /locus_tag="VHX39_03145"
     CDS             <1..1259
                     /locus_tag="VHX39_03145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEX3990153.1"
                     /translation="ADRLRPRTLDEVVGQDHLLGPDGAVTRMLARGSLASLILWGPPG
                     VGKTTIARLLAARAGLHFVQLSAVFSGVADLKKAFDDATRRRRLGEGTLLFVDEIHRF
                     NRAQQDGFLPVVEEGTITLIGATTENPSFALNGALLSRCQVLVLRRLDDPALDLLLTR
                     SETELHRTLPLTPEARTALRAMADGDGRYLLNMAEQIAAMPEATPPMDPGALSELLAR
                     RAALYDKDREEHYNLISALHKSLRGSDPDAALYWFARMLNGGEDPRYIARRLVRFAAE
                     DIGIADPNALTQALAGWETYERLGSPEGELAIAQVVVYLGTAPKSNAVYTALSAARAA
                     AKATGSLMPPAHILNAPTKLMKNLGYGAGYEYDHGTEDAFSGQNYFPDGIPRERFYQP
                     RDRGFEREISRRLEYWDKLREERAKS"
     gene            1259..1639
                     /locus_tag="VHX39_03150"
     CDS             1259..1639
                     /locus_tag="VHX39_03150"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3990154.1"
                     /translation="MLDHVSVAVRNLQTSADAYEQVLDAAGLRRLVNRPAMVGFGKNY
                     PEFWLNARTALAQLASDTGIHICLRVPDEDAVRMFHATAMRAGWKDAGAPGPRQGAMT
                     VYYAAFVQDPDGNKLEAATFPRKA"
     gene            1641..2633
                     /locus_tag="VHX39_03155"
     CDS             1641..2633
                     /locus_tag="VHX39_03155"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEX3990155.1"
                     /translation="MTAATQTVSDDEAEIRLDRWFRRHFPGVPQSAIQKLCRTGQIRV
                     DGRRTDAATRLASGQAVRIPPLPPAPPPAPAPQANPAAVREIEAMLLYQDDQLLVLNK
                     PYGLPVQGGPGISRHVDGMLEGFRNAAGDRPRLVHRLDRDTTGVLLIARTPGVAAKLA
                     AAFRGRDMEKTYWAVVAGRPVPVEGEIDLPLKRIGGDRGERTAPAERDDADAARAITE
                     YRTLDHAARKLAWLELKPHTGRTHQLRVHCVAIRAPILGDLKYARPDQNNAFAATVAG
                     LSEKMHLHARSLVFPHPAGGIMSVEADLPPHMTETFHTLGFSAPPARAPGRGGR"
     gene            2634..>3943
                     /locus_tag="VHX39_03160"
     CDS             2634..>3943
                     /locus_tag="VHX39_03160"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEX3990156.1"
                     /translation="MATDEIREIEEFREREPRPGLWLGLAGAVVVVGLVIGFLFWTLN
                     SGSLKPRLIEAVQRATGRTLTISGQTRFELSLSPTVSMENVALANPPGFSRANMITVA
                     RVEVGLDLLPLLEHRLEVDHVTLVQPDVVLETDASGRHNWLFSRENPPQASGTAPAAP
                     VQTAADAPADSEARQRLAVWFANASVTDGRVGWLDAKSGQHHEAQVPQLTLNAPPGDA
                     AQLTGAVVYLGRTITLTGRAEPTELADSGPGSGPWPVSLKLATGDADLTVDGQIEHPA
                     EARGYSLTIDAAAPDPSIFAPWLPGLPLASLKSLTAHAEVSDSGGTAPTLSTARIKVA
                     SVDVGMLGDGAKLENVTIGAKGDAPISVAAAVTRDGFESGITGTIGDLRWLNAGGTGP
                     VAVDLEWNAAAARAFVKGTVKAPAQMTGFDLDVAADVPKPVQIM"
BASE COUNT          680 a         1262 c         1311 g          690 t
ORIGIN      
        1 tcgccgaccg tctgcgcccg cgcacgctgg atgaggtcgt tggccaggac catctgctcg
       61 gtccggacgg tgcggtcact cgcatgctgg cacgcggttc gctggcctcg ttgatcctgt
      121 ggggcccgcc cggcgtcggc aaaaccacca tcgcgaggct gctggcggcc cgcgccgggc
      181 tacacttcgt tcaactctcg gcggtatttt ccggtgttgc cgacctcaag aaagccttcg
      241 acgacgccac ccgccgccgc cggcttggcg agggcacact gctgttcgtc gacgaaatcc
      301 accgtttcaa tcgcgcccag caggatggtt ttttgccggt cgtggaggag gggacgatca
      361 ctctgatcgg tgccaccacg gaaaatccgt cctttgcact gaacggcgcg ttgctctctc
      421 gatgccaggt cctggttctg aggcggctgg acgatccggc gctggactta ttgttgacgc
      481 gttccgaaac cgaactgcac cggacattgc cgctgacacc ggaggcgcgg actgcgttgc
      541 gtgccatggc ggatggcgac ggccggtatc tcctgaacat ggccgagcaa atcgccgcca
      601 tgccggaagc cacgccgccg atggacccgg gcgctctgtc agagttgctc gcccgccgcg
      661 ccgcgctgta cgacaaggat cgcgaggagc actacaacct gatctccgcg ctgcataaat
      721 cgctgcgcgg ctcggacccg gacgcggcac tttactggtt cgcccgcatg ctgaacggtg
      781 gcgaggaccc gcgctacatc gcgcgccgcc ttgtgcgttt cgcagccgag gacattggca
      841 tcgccgatcc caatgcgctg acgcaggcgt tggccggctg ggaaacctat gaacgtctcg
      901 gcagccccga aggtgaactg gcgatcgccc aggtggtggt ttatttggga acggcaccga
      961 aatcgaacgc ggtttatacc gcactcagcg ccgcgcgggc ggccgcgaaa gcaactggca
     1021 gcctgatgcc gccagcgcac attctcaacg cgcccacgaa gctcatgaag aacctgggct
     1081 acggcgccgg ctacgaatac gaccatggca ccgaggacgc cttctccggg cagaactatt
     1141 tcccggacgg cattccccga gagcggttct atcaacccag agaccgcggc ttcgaacgcg
     1201 agatttcccg gcgactcgaa tattgggata aattgcgcga ggaaagggcc aaatcctgat
     1261 gctggatcat gtgtctgtcg ccgtgcgcaa cctgcagacc agcgccgacg cctatgagca
     1321 ggtgcttgat gccgccggtc tcaggcggct cgtgaaccgt ccggcgatgg tgggattcgg
     1381 caaaaactac ccggaattct ggctgaacgc gcgaacggct ttggcgcagt tggcctcgga
     1441 taccggcatt catatctgcc tgcgtgtgcc cgatgaggat gccgtgcgca tgtttcatgc
     1501 cacggcaatg cgggcaggtt ggaaggatgc cggagcaccg gggcctcgac agggcgcgat
     1561 gacggtttat tacgcagcgt tcgtgcaaga cccggacggc aataaactcg aagcggcgac
     1621 gtttccccgc aaggcctgac atgaccgctg ccacgcaaac cgtctcggac gatgaggcgg
     1681 aaatccggct ggaccgctgg tttcggcggc actttcctgg cgtgccgcag agcgcgatcc
     1741 agaaactgtg ccgtaccggg caaatcaggg tcgatggtcg gcggactgac gcggcaaccc
     1801 gcctcgcgtc cggtcaggcg gtgcggatcc cgccgcttcc ccccgctccg ccgcccgctc
     1861 ccgcgcctca ggccaatccc gccgcggttc gggaaatcga ggcgatgctg ttgtaccagg
     1921 acgaccagct gcttgtcctg aacaagccct atggcctgcc ggtgcagggc gggcctggca
     1981 tctcccgcca tgttgacggg atgctggaag ggtttcgcaa tgcagccggc gatcggccgc
     2041 gtctggtgca ccggctggat cgcgacacga cgggcgtgct gttgatcgct cgcacccctg
     2101 gcgtcgccgc gaagctcgcc gccgctttcc gtggccgcga catggagaag acgtactggg
     2161 ctgttgttgc cggccgtccc gttccggtcg agggcgaaat cgacctgccg ctgaagcgga
     2221 tcggcggcga ccgtggcgaa cgcaccgcgc cggccgagcg tgacgatgcg gatgccgccc
     2281 gcgccatcac cgagtaccgc accctggacc acgccgcccg taagctggcg tggctggagt
     2341 taaagccgca taccggccgc acccaccaac tgcgcgttca ctgtgtcgcc atccgcgcgc
     2401 caattctggg cgatctgaaa tacgcccgtc cggatcagaa caatgccttt gctgccaccg
     2461 tcgccggatt gtcggagaag atgcatctgc acgcccggtc gctggtgttc ccccaccctg
     2521 ccggcggcat catgagcgtg gaggccgacc tgccgccgca catgacggaa acgtttcata
     2581 cgctcgggtt ttcggcaccg ccggcccgtg cgccgggccg cgggggacgc tgattggcaa
     2641 ccgacgaaat cagggaaatc gaggaattca gggagcgcga accccgcccc gggctttggc
     2701 ttggcctggc gggtgccgtt gtggtggtcg gcctggtgat cggctttctc ttctggacgc
     2761 tgaactcggg cagcctgaaa ccgcggctga ttgaggccgt ccagcgcgcg accggccgaa
     2821 cgctgacgat ctcaggtcaa acgcggttcg aactgtcgct gtcaccgacc gtgtcgatgg
     2881 agaatgtggc gctggccaat ccgccggggt tttcgcgggc caatatgata acggtggcgc
     2941 gcgtcgaggt cggcctggac ctgctgccac tgttggagca ccggttggag gtcgaccatg
     3001 tcacactggt gcagccggat gtggtgctgg agaccgatgc gtcgggtcgc cacaattggt
     3061 tgttttcacg cgaaaatccg cctcaggcga gcggtacggc gccggccgca cccgtgcaga
     3121 ccgccgcgga tgcgccggcg gactctgaag cgcggcagcg gctcgcggtc tggttcgcca
     3181 atgccagtgt cacggatggg cgggtcggct ggctcgatgc taagtccggg caacaccacg
     3241 aagcgcaggt gccgcaattg accctgaacg cccctccggg cgacgccgcg caattgaccg
     3301 gagccgtcgt ttacctgggc cgtacgatca ctctcaccgg gcgcgccgaa ccgaccgaac
     3361 ttgctgattc aggcccagga agcggacctt ggccagtgtc gctgaagctg gcgacgggtg
     3421 atgccgacct gacggtggac gggcagatcg agcacccggc ggaggctcgc ggttacagtc
     3481 tgacgattga cgccgcggcg ccagatccgt cgatctttgc accgtggctt cccgggttgc
     3541 cgctggcatc gctgaagtcg ctcacggcgc acgctgaagt cagcgatagt ggcggaacgg
     3601 ctcccacgct ttcgacagcc aggatcaagg tggcatcggt tgatgtcggc atgctcgggg
     3661 atggcgcaaa gctggagaac gtgaccatcg gtgcgaaggg cgacgcgccg atcagcgttg
     3721 ctgcagccgt cacccgggac gggtttgaat ccgggatcac cggcacgatc ggcgacctgc
     3781 gttggctcaa cgccggcggg acgggtccgg ttgcagtcga tttggagtgg aatgccgccg
     3841 cagcccgggc gttcgtcaag gggacagtca aggcgccagc ccagatgacc ggatttgacc
     3901 tggatgtggc ggccgatgtg ccaaaaccag tgcagatcat gaa
//
LOCUS       DATAVD010000168         1589 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2622821, whole genome shotgun sequence.
ACCESSION   DATAVD010000168 DATAVD010000000
VERSION     DATAVD010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2622821"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            48..1481
                     /locus_tag="VHX39_03165"
     CDS             48..1481
                     /locus_tag="VHX39_03165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein B"
                     /protein_id="HEX3990157.1"
                     /translation="MHVATSSAFKENAHRALADTGLQRALARSGSSFIARRAAAVENL
                     PEFEQLRDTARDIKNHTLANLDFYLEAYEAKVLESGGKVHWCADAGEARDAVLAICQA
                     AGARTVTKGKSMIGEEIAINEHLERHGIEPVETDLGEYIIQLRHELPSHIIAPAFHLN
                     MEDWEAAFRKSHTDLPADRVFAERRDILTEARGKLRSRFLAADVGITGANFLIAETGS
                     SVIVTNEGNGDLTQTLPRVHIVLASIEKMVPTIEDCTSLLRVLARSATGQEFSVYTTF
                     STGARREGDLDGPDEYHVVLIDNGRSAMIGSEFQEMLRCIRCAACMNHCPVYGAVGGH
                     AYGWVYPGPMGAVLTPGLIGVKQSGHLPNASTFCGKCESVCPVRIPLPKLMRHWRERE
                     FERHLTPASIRWNLGIWGFMARRPSLYRWVTRAVVLCLGWLGRRRGRFSRMPLAGGWT
                     EVRDLPAPEGDTFFARYAREQRARPLS"
BASE COUNT          297 a          466 c          520 g          306 t
ORIGIN      
        1 ctgacaacga ttgccaactt cggtagagtc tcccgaaagg agtcctcatg cacgtcgcca
       61 cctcgtccgc gttcaaggag aatgcgcacc gcgctctggc cgataccggt ctgcagcgag
      121 cgctggcccg tagcgggtcg agtttcatcg cgcgccgtgc ggccgcggtc gagaacctgc
      181 ccgagttcga gcaattgcgc gacaccgccc gcgacatcaa gaaccacacg ctggccaatc
      241 tggattttta cctggaggcg tacgaggcga aggtcctgga gtccggcggc aaggtgcatt
      301 ggtgcgccga cgccggagag gccagggatg ccgtactagc gatctgccag gcagccggcg
      361 cgcggaccgt caccaaaggc aagtcgatga tcggcgagga aatcgcgatc aatgagcatc
      421 tggaacggca cgggatcgaa ccggtcgaaa ccgatctcgg cgaatacatc atccagctgc
      481 gtcatgaact gccaagccat atcatcgcgc cggcgtttca tttgaacatg gaggactggg
      541 aggcggcatt tcgcaaatcc cacaccgatt tgcccgccga tcgcgtgttt gccgaacgcc
      601 gcgacatcct gaccgaggcg cgaggaaaat tgcgctcgcg gtttctggcc gctgacgtcg
      661 gcattacagg tgcgaacttt ctcattgctg aaaccggaag cagcgtgatc gttaccaatg
      721 aaggcaatgg cgatctgacg cagacgttgc ctcgggtgca catcgtgctg gccagtatcg
      781 agaaaatggt gccgacgatt gaggattgca catcgctgct gcgggtgctg gcacgctcgg
      841 cgaccggcca ggagttttcc gtctacacaa cgttttccac gggtgctcgg cgggaaggcg
      901 atttggacgg gccggacgag tatcacgtgg tgctgatcga caatggccgt tccgccatga
      961 tcggctccga attccaggaa atgctgcggt gtattcgttg cgcggcctgc atgaaccatt
     1021 gtccggtcta cggtgcagta ggcggtcacg cgtatggctg ggtttatccg ggtccgatgg
     1081 gcgccgtgct gacgccgggc ctgatcggcg ttaagcaatc cgggcactta ccaaatgcct
     1141 cgacattctg tggcaagtgc gaaagcgttt gtccggtgcg gattccgtta ccaaaactga
     1201 tgcgccattg gcgcgagcgg gaattcgaac gccatctgac cccggcttcg atccgatgga
     1261 acctggggat ttgggggttc atggcgcgcc gcccatcgct ctatcgctgg gtaacccgtg
     1321 cggtcgttct gtgtctgggc tggcttggcc gcaggcgcgg ccggttctcg cggatgccgt
     1381 tggccggtgg ctggaccgag gtgcgcgatc tgccggcgcc ggaaggcgat accttcttcg
     1441 cccgctatgc gcgcgagcaa cgggcacgac cgctgtcatg agcaaggaaa ccattctggc
     1501 cgcaatccgc cgaggcttgc ggcgcggagc ggtgcccgag gatcaggcag caatgttacg
     1561 cggccgtttg gaccggcatc cgcggcagt
//
LOCUS       DATAVD010000169         1808 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2993686, whole genome shotgun sequence.
ACCESSION   DATAVD010000169 DATAVD010000000
VERSION     DATAVD010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1808
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2993686"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..228
                     /locus_tag="VHX39_03170"
     CDS             <1..228
                     /locus_tag="VHX39_03170"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX3990158.1"
                     /translation="NGMHQWLANRGYAVLSVNFRGSTGFGKAFIKAADQEWGGRMQDD
                     LTDAAAWAVAEGYADPAKIGFAAPAMAAMRL"
     gene            296..736
                     /locus_tag="VHX39_03175"
     CDS             296..736
                     /locus_tag="VHX39_03175"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX3990159.1"
                     /translation="MTFLRASPPYWHTYFALLRQRLAAPETEAGRAWLMSRSPITFAD
                     RIVRPLLIFQGMNDVRVTPAESEQIVDALKRRDIPVTYVTFSDEGHGIVREENRLAYS
                     AVMEAFLAQHLGRAAEPVGDAFAGSTMRFVSGGELIPGVPSGRA"
     gene            complement(752..1573)
                     /locus_tag="VHX39_03180"
     CDS             complement(752..1573)
                     /locus_tag="VHX39_03180"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3990160.1"
                     /translation="MATDNQAVIVTGAASGMGLAMTIALLTSGHDVTAVDRNGAALAE
                     LAKRAANLRGKVNPVTADLAQPDSFAHVTGSALIKFGRIDALVNNAGIGQASIRSDQR
                     KDPIRFWDTTPEQWNHFVTVNAAAPINMARAVLPHMLTAKSGRIITVTTSLGTMVREG
                     YLLYGSSKAAAEAAMAVLAADLAGTGVTSNILVPGGTTNTPLVGEAGDPAKMLQPEIM
                     GAPLLWLLSDEAREVNGRRFIAADWDPSVPAGQAAEKAGAPIAWMSIARMPIQPT"
BASE COUNT          311 a          547 c          580 g          370 t
ORIGIN      
        1 aacggcatgc atcagtggct cgccaaccgc ggctatgcgg tgttgagcgt gaacttccgc
       61 ggctcgaccg ggttcggcaa ggcgttcatc aaggctgccg atcaggaatg gggcggtcgc
      121 atgcaggacg acctgacaga cgctgcggca tgggcggtgg cggaaggata tgcggatccg
      181 gcgaagatcg gttttgcggc gccagctatg gcggcaatgc ggctctgacg gccgcgacgc
      241 ggacgccgga gacgttcgcc tgcattgtgt cgacatcttc gggatatcga acctggtgac
      301 cttcttgcgg gcaagcccgc catactggca cacgtatttc gctttgttgc ggcaacgcct
      361 cgccgccccg gagacggaag ccgggcgcgc ctggttgatg tcacgctcac cgattacgtt
      421 cgccgatcgt atcgtgcgtc cattgctgat ttttcaagga atgaatgacg tgcgggtgac
      481 gcccgcggaa tcggaacaga tcgtcgatgc gctgaagcgg cgcgatattc ccgtcaccta
      541 tgtgacgttc agcgatgaag gtcacggcat cgttcgcgag gaaaatcggc tcgcgtacag
      601 cgcggtgatg gaggcgtttc ttgcgcaaca tctcggacgc gccgccgaac cggttggcga
      661 tgcatttgcc ggttccacaa tgcggtttgt ttccggtggc gaactgatac ctggagtgcc
      721 gtccggacgg gcctgacggg agcgtaacga tttaggtggg ctggatcggc atccgcgcaa
      781 tactcatcca ggcgatcggc gcccctgcct tttccgccgc ctgtcccgcc ggcacggatg
      841 gatcccaatc ggcggcgatg aagcggcggc cgttcacttc acgcgcttcg tccgacagca
      901 gccagagcaa cggcgcaccc ataatctcgg gttgcagcat ttttgccgga tcgcctgcct
      961 cgcccaccag cggcgtgttg gtcgtgccgc cgggcacgag gatgttggac gtgacaccgg
     1021 tgccggccag gtccgctgcc agcacggcca tcgccgcctc tgctgccgct ttggatgagc
     1081 cgtacagcag gtaaccttcc cgcaccatgg tgccgaggct cgtggtgacg gtgatgattc
     1141 tgccggactt tgcggtcagc atatggggca acacggcacg cgccatgttg atcggcgccg
     1201 cagcgttcac cgtgacgaag tgattccact gctcgggcgt ggtgtcccag aaacggatcg
     1261 gatccttgcg ctgatcggac cgtatcgagg cctggccaat gcccgcgttg ttcaccagtg
     1321 catcgatccg gccaaattta atcaaggctg aaccagtgac gtgcgcgaac gagtcgggtt
     1381 gcgccagatc ggcggtaacc gggttcactt tgcctcgaag gtttgccgcg cgctttgcga
     1441 gttccgcgag cgcagcacca ttgcgatcca ctgcggtgac gtcgtgcccg gaggtcagca
     1501 gcgcaatggt catggcgaga cccatgccgc tcgcggcgcc ggtgacgatg accgcctgat
     1561 tgtccgttgc cattgatgct ttctccattg ctgcggcgcg gtcaccctgt tcgctccgac
     1621 cgccgctgtc cagagcgagg acgttgcccg gtaccgatgc gacgaaaatt gtcgttaccg
     1681 aatttggcgc cagttcatgt gtctttcgtc ccgatggcaa acgatcattg cgccggtcgc
     1741 actcaacaac aggacggttg cgataatcaa tgcttctcgc aggcctggca tgaagctttg
     1801 cgtcccgc
//
LOCUS       DATAVD010000170         2918 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_573866, whole genome shotgun sequence.
ACCESSION   DATAVD010000170 DATAVD010000000
VERSION     DATAVD010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_573866"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..942)
                     /locus_tag="VHX39_03185"
     CDS             complement(73..942)
                     /locus_tag="VHX39_03185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3990161.1"
                     /translation="MLEILMSQIVSGLVVGSLYVLIAIGLSIIFGLLGIVNFAHGSFF
                     TLGAYFALSLYQYFGWPAVILAPIFVGIIGMAVERTLIQRLYDKEPLISLIVTFALAL
                     LIEASVRLVYGGIGQPFSPPPFLSGFLVWGPILITQYRMAMLAATAVLLLLLWLFLEK
                     TPFGRILRAGSRDPEMVGLLGINLPRVLTWVFGLGCAISGIAGVMAAPLWTVTPSMAT
                     NAIMPAFVVVAIGGLGSFAGAVIAGLMVGVVIALTIQFYPSASGAVMYVFMAVMLILR
                     PRGLLGERWERFE"
     gene            complement(1054..2289)
                     /locus_tag="VHX39_03190"
     CDS             complement(1054..2289)
                     /locus_tag="VHX39_03190"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990162.1"
                     /translation="MSSGYSGLLIPRRKALLGATALAAAPLAAPHIARAADPIRIGLL
                     LAKTGQIAAQTEYLANGSFLALEERNNMIMGRPAELVWLDEPTPQAATQNMQKLVQEN
                     KVSAILGGSLSSNALAEEATAAQLKIPFVCNNAAATEISGKNCNRYTFRLNTPVAVQC
                     RMLAPFALTHGKKWYFITASYAFGQDIIRSGRELLKEAGGTEVGSDEVPLNTPDFSSF
                     ILKIRQAKPDVVWGGLSAGDLSTFLKQWDAMGMRGKIPFLEIAIGDTDIWSVGPEAAT
                     GTFTALWWYKNPNNTPEEKKFAESYDKKYGKPAADKAWMGWITARSLFESIDAVKSLE
                     PMKIIEGLEAWKAPADGYSYSYRKFDHQMMMKNLAVSVKPKITDKWDYFNVEAALPKD
                     AADLGKVFGTEAEVGCKMG"
     gene            complement(2350..>2918)
                     /locus_tag="VHX39_03195"
     CDS             complement(2350..>2918)
                     /locus_tag="VHX39_03195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3990163.1"
                     /translation="LPMGRMDHFVLFYLALFGFIPEQLWEIPDTMGLIQSRTMTSAGH
                     EIRLPLNISESRETTTGRFLTTFSGAGVQHIAMASTDIRRTMEQLAARGARFLPIPGN
                     YYEDIEARWGLDDTRLEMLRAHNILYDRDDTGEFLHAYTDPFDDRFFFEIVQRIDFYQ
                     QYGAANASVRMAAQAKRRNALLESELLT"
BASE COUNT          551 a          931 c          897 g          539 t
ORIGIN      
        1 tcaggtgcca cagcccggtc agggcgacca gtacgacgaa gatcaccagg acggggtgac
       61 ggatggcgtt gctcattcaa agcgctccca gcgctcaccc agcaagccgc gtggtcgcag
      121 aatcagcatc acggccatga aaacatacat caccgcgccg gaggccgagg ggtagaactg
      181 gatggtcagg gcgatcacca cgccgaccat cagcccggcg atgacggcgc cggcgaacga
      241 ccccaggccg ccgatggcga cgacgacgaa ggccggcatg atggcgttgg tggccatcga
      301 cggggtgacg gtccacagcg gcgcggccat caccccggcg atgccggaaa tcgcgcagcc
      361 gagaccgaac acccaggtca gcacgcgcgg caggttgatg ccgagcaggc cgaccatttc
      421 cgggtcgcgc gatccggcgc gcaggatgcg gccgaacggg gtcttttcca ggaacagcca
      481 cagcagcaac agcagcaccg cggtggccgc cagcatcgcc atgcggtact gggtgatgag
      541 gatcgggccc cagaccagaa agccgctgag gaacggcggc gggctgaacg gctggccgat
      601 gccgccgtag accagccgca ccgatgcctc gatcagcaag gccagcgcga aggtgacgat
      661 caggctgatc agcggttcct tgtcgtacag gcgctggatc agggttcgtt ccacggccat
      721 gccgatgatg ccgacgaaga tcggcgccag aatgaccgcg ggccagccga aatactgata
      781 cagcgacagc gcgaagtagg cgcccagggt gaagaacgaa ccatgggcga aattgacgat
      841 gcccagcagt ccgaaaatga tcgacaggcc gatggcgatc agcacgtaga gactgcccac
      901 gaccaggcca ctgacgatct gggacatcag gatttccagc atgatggacc gggtcctccc
      961 cccttatcgt tggtggccag gtctgcctgg ccgcttgaaa gtgtgggcgt gcggcgggcc
     1021 ggccagggtg catccccgac cggccggacc gcgtcagccc atcttgcagc cgacttccgc
     1081 ctcggtgccg aacaccttgc ccagatcggc ggcatccttc ggcagtgccg cctcgacgtt
     1141 gaagtagtcc catttgtcgg tgatcttggg tttcacgctg accgccaggt tcttcatcat
     1201 catctgatga tcgaacttgc gataactgta ggaatacccg tcggccgggg ccttccaggc
     1261 ttccagcccc tcgatgatct tcatcggctc cagcgatttc acggcgtcaa tcgattcgaa
     1321 aagcgaacgc gcggtgatcc agcccatcca ggccttgtcg gccgccggct tgccgtattt
     1381 cttgtcatac gattcggcga atttcttttc ttccggcgta ttgttggggt tcttgtacca
     1441 ccacagcgcg gtgaacgtgc cggtcgccgc ttccggcccg acggaccaga tgtcggtgtc
     1501 gccgatggcg atttccagga acgggatctt gccgcgcatg cccatcgcgt cccactgctt
     1561 caggaaggtg gacagatcgc cggcggacag gccgccccac accacgtccg gcttcgcctg
     1621 gcggatcttc aggatgaagg agctgaaatc aggcgtgttc agcggcactt cgtcggaccc
     1681 gacttcggtc ccgcccgctt ccttcaacag ctcacggccc gacctgatga tgtcctggcc
     1741 gaacgcatac gatgcggtga tgaaatacca cttcttgccg tgggtcagcg cgaacggcgc
     1801 cagcatccgg cattgcaccg caaccggcgt attcagccgg aacgtgtagc ggttgcagtt
     1861 cttgccactg atttccgtcg ccgcggcatt gttgcacacg aaaggtatct tcagttgtgc
     1921 cgcggtcgct tcctcggcca gtgcgttcga cgacagcgat ccgccgagga tggcggacac
     1981 cttattttcc tgcaccagct tctgcatgtt ctgcgtggcc gcctgcggtg tcggttcgtc
     2041 cagccacacc agttccgccg gccggcccat gatcatgttg ttgcgctcct cgagcgccag
     2101 gaacgaaccg ttcgccaggt attcggtctg cgccgcgatc tgcccggtct tggccagcag
     2161 caggccaatc ctgatcggat cggcggcgcg cgcgatgtgc ggcgcggcca gcggcgcggc
     2221 ggccagggcg gtggcaccca gtagggcctt gcggcgcggg atcagcagac cggagtaacc
     2281 agacgacatt ttcacttccc ctcgtgttat ttacagttgt ccaggacgcg ttcgtttaac
     2341 gcgtctcctt tacgtaagca attcggattc cagcagtgca tttcgccgtt tcgcctgcgc
     2401 cgccatgcgt accgacgcat tcgccgcgcc gtattgctga tagaaatcga tccgctgcac
     2461 gatctcgaag aagaaccggt cgtcgaacgg atcggtgtag gcgtgcagga attcgccggt
     2521 gtcgtcgcgg tcgtacagga tattgtgcgc ccgcaacatc tccagccgcg tgtcgtccag
     2581 gccccagcgc gcctcgatat cctcatagta attgccgggg atcggcaaaa aacgagcgcc
     2641 gcgggccgca agttgctcca tcgtgcgacg gatatcggtg cttgccatcg cgatatgctg
     2701 cacgccggcg ccggaaaatg tcgtcaggaa ccgcccggtc gtcgtttccc ggctttccga
     2761 gatattcagc ggcagcctga tctcgtgccc cgcgctcgtc atcgtccggc tttgtatcaa
     2821 ccccatcgta tctgggattt cccaaagctg ctcggggatg aaaccgaaca gtgccagata
     2881 gaacagcacg aaatgatcca tccggcccat cggcaagg
//
LOCUS       DATAVD010000171         2747 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2993756, whole genome shotgun sequence.
ACCESSION   DATAVD010000171 DATAVD010000000
VERSION     DATAVD010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2747
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2993756"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..422
                     /locus_tag="VHX39_03200"
     CDS             <1..422
                     /locus_tag="VHX39_03200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990164.1"
                     /translation="SLTIFPNVTGLVYIAGCSFLLRHAGFEVALGIWVSFGVVFLLCS
                     LHMIQRAIGTEWWTQLKPMGSAVLPAAGMSVMLYGVSMLHPVNSMLGMLLLKIIVGAT
                     SYLLLVIALERPLLIQILGRSVPQRTAAQVGVTRPSS"
     gene            complement(819..1004)
                     /locus_tag="VHX39_03205"
     CDS             complement(819..1004)
                     /locus_tag="VHX39_03205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990165.1"
                     /translation="MAVLDCGILGDAGATPSPMLDWFHIAMRMNHLTQVVAAVQVDDP
                     ARTAAKAVIVNKVERLR"
     gene            complement(1065..1361)
                     /locus_tag="VHX39_03210"
     CDS             complement(1065..1361)
                     /locus_tag="VHX39_03210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990166.1"
                     /translation="MEYATDLAFRSAATLGPLYDQLVRESVIGVKADQVASFLGRKIA
                     PQRDQEVGSQFSTRIEGTCVKHRFGKASIKMYDKAGIVLRIETTANELIPTSKR"
     gene            complement(1367..2086)
                     /locus_tag="VHX39_03215"
     CDS             complement(1367..2086)
                     /locus_tag="VHX39_03215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990167.1"
                     /translation="MSQSLTKRYDDRIAGLLSCYDRVVITGTLPTICYAEGMTRFLYA
                     SGIKIFADPGFAQTLRDRVRDTAAALAAKAGVTIERSAKNHIRKEAVVQGVLEQRGDH
                     PGLVHIISAMEACDAYRPWHNKTTHQTFIRPDSGKCLHYYFYFMDAAFGLIYLRVPTY
                     CPFRLQFYCNGHNWLGRQLTAAGIGHAMLDNALRGSTTGRAPRNWPMGSRRTGCIGHW
                     TATPANAARWPMCSGKLTTGA"
     gene            2348..>2747
                     /locus_tag="VHX39_03220"
     CDS             2348..>2747
                     /locus_tag="VHX39_03220"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HEX3990168.1"
                     /translation="MQSPYSRTLADLLFEQADRHGHRPAVICDDRIISYADLARRATC
                     VAASLRARGLTRGDRVGLLVNNRVEWLEVFFGTAIAGGVTVAFSTWSTADELDWLLRD
                     SDVRVLVTLDRFSDNDFAALLRDRTSYSTLC"
BASE COUNT          485 a          857 c          822 g          583 t
ORIGIN      
        1 ccagcctgac gatctttccc aatgtgacgg gtttggtcta tatcgctggg tgctccttcc
       61 tccttcgtca tgccggtttc gaggtcgccc tggggatttg ggtctcgttc ggcgttgttt
      121 tcctgctctg cagccttcac atgattcaga gggcgatcgg taccgaatgg tggacccagt
      181 tgaaaccgat gggatctgct gttctgccgg ccgccggcat gtcggtcatg ttgtacggcg
      241 tgagcatgct ccatccggtc aactccatgc tggggatgtt gctgctgaag atcatcgttg
      301 gtgcaacgag ttacctgctg ctggtgatcg cgctcgagcg gccccttctg attcagattc
      361 tgggtcggtc cgttcctcag aggactgccg cacaagtggg ggtcacgcgg ccatcttcgt
      421 gagtaggttt ggatcgttgg cgggctggaa tttctgtcca aagccggtac taagcgtgcc
      481 attatagaca gtgcagcgcg cctgcagcag aagatcgggg ccacgtcctg accagcgcat
      541 ctgccgcgat ttattcatcc gacggttcac cggaaaattg gccgtccctt cggtgagtgc
      601 ggtcccgccc ccagcccggc gcaataccgc tcggcgtggt ttaccaacca gtcacgcgag
      661 ccagtcagat atcggtccag cgcgtgtagc gcagtccaca ccttacctga cggcatcgcg
      721 cgctttcgct caccttgatt atcttgaaaa tgatgcataa cggcatggat gcgctcgatg
      781 ctgatgcgag cattcgtggc tttgccattc cacagccgtc aacgcagccg ttcgacttta
      841 ttgacgatca cagccttcgc cgctgtccgt gcaggatcat cgacctgcac agcggcgacg
      901 acctgcgtca gatggttcat tcgcatagcg atgtggaacc agtcgagcat cggcgacggc
      961 gtggcaccgg cgtcgccgag gataccgcag tccaggacag ccatcagtga aggtggtcag
     1021 gagcgcgtcc tcggtgcgcc caacgacgtc gaggttccga cagatcagcg ttttgatgtc
     1081 ggtatcagct cgttcgccgt ggtttcgatc cgcaacacga tgccagcctt gtcgtacatc
     1141 ttgatcgacg ccttgccgaa gcggtgcttc acgcaggtcc cctcgatccg cgtcgagaac
     1201 tgagagccga cctcctgatc ccgttgcggc gcgatcttcc ggccaaggaa gctggccacc
     1261 tgatcggcct tcacgccgat caccgattcc cgaaccagtt ggtcgtatag cggcccaagc
     1321 gtggcggcgg agcggaacgc cagatcggtg gcgtattcca cttgcatcag gctccagtgg
     1381 taagcttccc cgaacacatc ggccaccggg cagcattggc tggcgtagcg gtccagtgtc
     1441 cgatgcaacc ggtccggcga gaacccatcg gccagttcct gggcgcgcgg ccagtcgtcg
     1501 atccgcgcaa ggcgttgtcg agcatggcgt ggccgatgcc tgccgccgtc agttgacgcc
     1561 ccagccagtt gtgtccgttg cagtagaatt gcaggcggaa cggacagtac gtgggcaccc
     1621 gcaggtagat caatccgaac gcggcatcca tgaaatagaa gtagtagtgc aggcacttgc
     1681 cgctgtccgg gcgaatgaag gtctggtgcg tggttttgtt atgccatggc cggtaggcgt
     1741 cacaggcttc catcgccgag atgatgtgga ccagcccggg gtgatcgccg cgttgctcca
     1801 gcacgccctg aaccaccgct tccttgcgaa tatggttctt cgcgctgcgc tcgatcgtca
     1861 ccccagcctt ggcggccagc gccgccgcgg tgtcccgcac acggtcccgc aacgtctgcg
     1921 cgaagcccgg gtcagcgaag attttgatcc cgctggcata cagaaaccgt gtcatcccct
     1981 cggcgtagca gatcgtcggc agggttcccg tgatcaccac acgatcatag caggacaaca
     2041 gccccgcgat ccggtcgtca tagcgcttcg tcagcgattg gctcatggca tcccccgcgc
     2101 gggtgacagg ttcgccaggg atgatatacc agacttattg gttccggctc cgccggctta
     2161 gggcctatct cagtagggcg ctttggattt ggaaattaca tctaagtcaa tagattatcc
     2221 gtcgggaggt ggcctactga gataagctct aagcctgggc gcatgccgtg tcagcctgcc
     2281 cacggcacgt ccgcttgaca cacacgtccg ccgcccataa aaagcgaata ttattcggaa
     2341 atgcccgatg cagtcaccct acagccgaac ccttgccgat ctgctgttcg aacaggcgga
     2401 ccgccacggt catcgccccg ccgtgatttg cgacgaccgg atcattagct acgcggacct
     2461 cgcccgacgc gccacctgtg tcgccgcatc cctgcgtgcc cgaggcctga cgcgcggcga
     2521 tcgggtcggt ctgctggtga acaaccgggt ggaatggctg gaagttttct tcggcaccgc
     2581 catcgccggc ggcgtgacgg tcgcgttcag cacctggtcc accgccgatg aactcgactg
     2641 gctgctgcgt gattcggacg tgcgcgtcct ggtcacgctg gaccgcttca gcgacaacga
     2701 tttcgcggcg ctgctgcgcg accgcacgtc ctactccact ctgtgcg
//
LOCUS       DATAVD010000172         2214 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2436535, whole genome shotgun sequence.
ACCESSION   DATAVD010000172 DATAVD010000000
VERSION     DATAVD010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2436535"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..877
                     /locus_tag="VHX39_03225"
     CDS             <1..877
                     /locus_tag="VHX39_03225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008892342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3990169.1"
                     /translation="ITVAEMGSFTHAADSLGIQKGRVSTAVRKLEEDVGVRLLHRTTR
                     SVQLTEDGRAFHARARDLLAEVDDLHSMFAGDRVALRGRLRVDLPTEVARTTIVPALP
                     DFMATHPELELEVSSTDRQVDLVQEGFDCVLRLGPIRDETLIARPLGLLRVVNAASPA
                     YLARYGVPRSPEDLPRQGHRSIHFSTMLGARPYGWEYPDGDSYATLQLPGALHVNSAQ
                     TYEAAALAGLGLIQAPLLGIGRYLESGALVEILPDFRRRSLAVSLVVAHRSNLSRRVR
                     AFMKWIEDVLTPYLE"
     gene            1349..>2214
                     /locus_tag="VHX39_03230"
     CDS             1349..>2214
                     /locus_tag="VHX39_03230"
                     /inference="COORDINATES: protein motif:HMM:NF012432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HEX3990170.1"
                     /translation="MTDAFHWLCEINKASAVMTVERGIVPRSLAAPIAHAIAEVIAAG
                     AKPGAERPGDYLKMEALLIAAGGPDVTRVHSGRSRQDINATFGRLFLREDLLATLTAL
                     NGARDALLTLAEAHADAIIPAYTWGVQAQPTSFGHWLGAYAAALARTAERIRQAYARV
                     NLCPLGSAALGTSSFPVDRPRLAELLGFDGVAENSFDATQISAVDLRAEACQVASTSG
                     LTIGMLIADITQQYAQTRPWLLLNQGAQTGVSSIMPQKRNPSGLVWLRKLASTVAGGA
                     TMFAFHAHNIASG"
BASE COUNT          391 a          684 c          701 g          438 t
ORIGIN      
        1 cattacggta gcggaaatgg gaagcttcac ccacgcggcc gatagcctgg gcatccaaaa
       61 ggggagggtc tcaacagcgg tccggaagct ggaagaggat gtcggtgtca ggctcctgca
      121 tcggacgacg cgcagcgtgc agttgacgga agacggacga gcatttcatg cgcgtgcccg
      181 cgatctgctt gctgaagtcg atgacttaca ctcgatgttc gcaggcgatc gcgtggcact
      241 tcgcgggcgt ttacgggtcg atcttccgac cgaggtggcg cgcacgacga tcgtgccggc
      301 gttgccggat ttcatggcga ctcaccccga gttggagctg gaggtgtcga gtacggatcg
      361 gcaagtcgat ctggttcaag aggggttcga ctgtgtattg cggcttggac ccatacggga
      421 cgagacgctg attgcccgcc cactgggcct gttgcgcgtg gtcaacgctg ccagtcccgc
      481 ctatctggcg cgctatggcg tccctcgatc gccagaagat ctcccgcgtc agggacatcg
      541 gtcaattcat ttttcgacga tgctgggcgc cagaccctat ggctgggaat atccggacgg
      601 cgacagctac gcgacgcttc agttgccagg tgcgctacac gtcaacagcg cgcagaccta
      661 cgaagccgct gccctcgccg gcctcggcct tattcaggcg ccacttctgg ggattggccg
      721 atacttagag agtggagcgc ttgtggagat cttgcccgat tttcgtcgcc ggtcgctcgc
      781 cgtgtccctc gtcgtcgcac atcggagcaa tctgtcgcgc cgagtccgtg cgttcatgaa
      841 atggatcgaa gatgtgctga cgccgtatct ggaatagcga gacgaaaatc ttcgtccggc
      901 tttcgaaatc aacattctga agttatgtct gcgggtcggc ggcccggcgg tccaacagaa
      961 tgcgacaccg aaaccgccga cctttgaagt ccgacctggg atgtcctcaa acttttccgc
     1021 cttctgtttc ccgaacgccg tgccaatgca acagaaccat tccgtatcag gttcggagat
     1081 atccggctgc cggcaacctt tgccggggcc gccgccgacg tccgtaaggc agcaaacggg
     1141 caatccgccg cgtcgacatg ccgccgcctg gaagcggcac tcggtttgat tgtgtcgaga
     1201 aagcaaaggt tgcgggatcg tgccgcagcg aggcttggat ccgcttcgct gccggcaagg
     1261 ccgtcgctgg acatcggctg ctgctgacca ttaaaattac tgccccggtt gagccctgtt
     1321 tccgggacct ggcccaggaa cacgcaacgt gacagacgct tttcactggc tgtgtgagat
     1381 caacaaggcg tccgcagtca tgaccgtcga gcgtgggatc gtgccgagat ccctcgctgc
     1441 cccgatcgcg cacgccatcg ccgaggtgat tgccgccggc gcgaagccgg gagcggaacg
     1501 accgggcgac tacctcaaaa tggaggctct cctcatagcg gccggcggcc cggacgtgac
     1561 gcgcgtgcat tccggccgca gccgtcagga catcaacgcc acctttggcc ggttgtttct
     1621 gcgcgaggac ctgttggcga cgcttacggc gttgaatggc gcccgcgacg cgctgctgac
     1681 cctggctgag gcccatgcgg atgccatcat ccccgcctat acctggggcg tgcaggcgca
     1741 gcccacatcc ttcggccatt ggctgggcgc ttatgccgca gccctggctc gcaccgccga
     1801 acggatccgg caggcttacg cgcgggtgaa tttgtgtcct cttggcagcg cggcgcttgg
     1861 cacctccagc tttccggtgg atcgccccag actggccgaa ttgctcgggt ttgacggcgt
     1921 ggcggagaat tcgttcgatg ccacacagat ctcggccgtc gacctgcggg cggaggcctg
     1981 tcaggtcgct tcaacatctg ggctcacgat cgggatgctg atcgccgata tcacccagca
     2041 atacgcccag acccggcctt ggcttttgtt gaaccagggc gcgcagaccg gcgtgtcctc
     2101 gatcatgccg cagaagcgaa acccgtccgg tctggtgtgg ctgcgcaagc tggccagtac
     2161 ggtggccggc ggtgccacga tgtttgcgtt ccacgcgcat aacatcgcat cggg
//
LOCUS       DATAVD010000173         7043 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_389232, whole genome shotgun sequence.
ACCESSION   DATAVD010000173 DATAVD010000000
VERSION     DATAVD010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7043
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_389232"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1604)
                     /gene="pbpC"
                     /locus_tag="VHX39_03235"
     CDS             complement(<1..1604)
                     /gene="pbpC"
                     /locus_tag="VHX39_03235"
                     /inference="COORDINATES: protein motif:HMM:TIGR02073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1C"
                     /protein_id="HEX3990171.1"
                     /translation="MIRRVSTCLGLALVVLAGTALILDRLFPLNLTRLSSNGTEVLDR
                     QGKTVALLPAPGGVWRFRASADDVAPVLLRTLVSTEDRHFWIHPGVNPISLLRASAQD
                     LRAGRIVSGGSTLTMQVARLLEPRPRTVRSKLVEIARAFQLEWHFSKREILGMWLTLA
                     PYGGNLEGVRAGAMAWFGASARNLDTAQAALLVGIPRRPEALRPDRHPEAAHAVRDRI
                     LAADGGDVPRARLPLPRHAPQAVARLAGPAQVTTTLDLPLQFALERLASDQLRRLPAR
                     ASLALLVVDAHTREIRAIVSGGEQTEQARSGALDLTMAVRSPGSAMKPFIYAMAFEAG
                     IAGPETRVEDLPRHFGAYAPEDFDRGFAGDVTAGEALRRSLNLPAVELLDQIGPAQFA
                     ARLKLAGITLHLPAGATPSLPLALGGAGITLRDLSGLYAALATDGSAGAPTILPQAVT
                     AGAPFLQPRAAEAIAAVLTQRFPDSSLPGIAWKTGTSWGGRDSWALGFDRTNVVGAWV
                     GRPDGTPLPGATGRSLALPLVARVFE"
     gene            complement(1675..6777)
                     /locus_tag="VHX39_03240"
     CDS             complement(1675..6777)
                     /locus_tag="VHX39_03240"
                     /inference="COORDINATES: protein motif:HMM:NF019323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0010951 - negative regulation of
                     endopeptidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin"
                     /protein_id="HEX3990172.1"
                     /translation="MGLRILLLLCFILLGLATSRADPVDLPGLQHDSQAYVTSLTKRF
                     PAGSTPAARHAAEQQAAAALAKQDWPAAATALETRIAQGDATAKQYLDLATAQSRRAP
                     PNPRLALYAAWMAVSGSQPGTAEVPGLLLMADALHALDRDGQAVLVWQAVVERAPDNP
                     AYQKSLTDMQHAVGVLVRKVHDETDADPPRACVEFTVPPVRHSDFAPQDWVRLTPPVP
                     DSAVTREGDQICVSGLPPGTTTQLTLRAGMPGEGGLTLVKETTLPIAVPNLPRRIVFD
                     TRVFVLPRGQSLSMTMTTVNLSAVSLRLIRLTERNVAQYLRDSKLGEAVDLWRANNLA
                     DQSGREVWTGTAQVTTWEPNKPVRTALPIPDALVASGPGLYELIATPGDGTSKDDDSS
                     AVQTILRTDLAPTVWRGSDGLTVQVRAYSDAKPRPDVRLALLAVNNDILAEARTDAQG
                     FARFPQSLLLGEGPQAPAALHAFGADNDFAALDLNVASFDLSDRGVEGIPHPGPIDAY
                     VWLDRGIYRPGETVQVMAMLRDSAGVPLDIPATVTIKRPNGQVFLRATPPHAGDASLY
                     LPVVLSSGAAAGTWHVEVNADPKAPPIGSMDFRVDAFVPDRMAVEAGPLPPALVPGHT
                     SDIPVSARFLYGAPAAGLTGKATLKLVLDPDPFPALTGYHIGLVGETYAPESRDLEMA
                     ETDAEGHTTLPVTIDQAPDVTQPVKAQIDVEVDDPAGRASRASVSIPVRPAGPFIGIK
                     PLFPDDAVDAQTEAAFDIAAVDPTGNRTSMAAKLRLVRERPDWRMVMRGSLARYETVW
                     KDEPLETSDVSLSDTQPFHYAKRLDFGRYRIEVAQANGMAITSYRFRSGWASSDSPDV
                     PDRVDVSADRKTVPVGQSVRIHIAPPFAGEATLLVLSDKVLASRDLTVPEGGTTVDVP
                     VDASWGPGAYVAVHVFRGGAGTRPGRSLGLTWVGVDPSARMLPVSITVPDKTLPRGRL
                     MVPVKAEPGAWLTMAVVDEGILRLTRFVSPDPAAHYLARRRLGLDIRDDWGRLIAPSD
                     GAATVLKQGGDDDGTPLPDIPIRTVTLFTPPVQAGADGTATIPVELPDFNGQVRLMVV
                     AWHGSKIGAAASDLVVRDPLIAEALLPRFLAPGDDARLAVLLHNIDLPAGEAKAVIST
                     DGPLTIVGSNTVSAVLETGQRAVPGTTLHATGAGRGVVKLTITGPGGFNLLRDTAITV
                     RPSRGLSSIVASNELQPGTDARITPATDRFIPGTWKASVRIGGPVRYDAAGVVQELAD
                     YPWSCLEQSTSRGFPLAVLPDGPMVGDDRAGRLQTAVASVLDRQRFDGGFALWTAAGD
                     AEPWLTPYAVDFLLRAKAAGAVVPDPALADALKFMRQAADDEPGDPEAKSAQAYRLYV
                     LARAGQGLPGAARVLAEDLDQLPTPLARAQLGAALMLAHDRPRAEAAFAAALDSPARK
                     WWYKDYGSALRDQLAIVVLLKESGVLPERLTALTAALPGADLQPDSLSTQESAWAVAA
                     AAALGKDGQPARIRMDGKEFPAAATITSALSGPVTVRNLGDRAVWQSVSVTGVLSEAP
                     PAARSGMRITRKFLHEDGTPLDLDTLRQNTTFVLLLEGRAEDGQDHHALIAQGLPAGW
                     EVVSRFNEGAVPGMAWLDKLSATDAQPAADDRYAAVVSLASDAPGFRVAVRLRAVTPG
                     AFELPGAEVADMYRPAVFAHQAAARINVLSAE"
BASE COUNT         1317 a         2317 c         2246 g         1163 t
ORIGIN      
        1 atctcaaaga ctcgcgccac cagcggcaag gcgaggctgc gtccggtcgc cccgggcagc
       61 ggtgtcccat ctggccgccc cacccacgcc ccgacaacgt tggtacggtc gaaacccaag
      121 gcccaggagt ctcggccgcc ccaactggtg ccggtcttcc aggcgatgcc gggcaggctg
      181 gaatcaggga accgctgtgt cagtaccgct gcaatcgcct ctgccgcccg tggctgcagg
      241 aacggtgcgc ccgcggtcac agcctgcggc aatatcgtcg gcgcgccggc tgaaccatcg
      301 gtggccaaag cagcatacag accgctcaga tcgcgcagcg tgattccggc gccacccagg
      361 gccagtggta atgacggcgt ggcacctgcg ggcaaatgta atgtaatacc tgccagtttc
      421 agccgggccg cgaactgggc tggtccaatt tgatccaaca gctccaccgc cggcaggttc
      481 agcgaccgcc ttaatgcctc gccggcagtc acgtcgccgg cgaacccacg atcgaaatcc
      541 tccggcgcgt aagcgccaaa atggcgaggc aagtcctcga cacgtgtctc aggcccggcg
      601 atccctgcct cgaacgccat ggcgtagatg aacggcttca ttgccgagcc cggcgagcga
      661 acggccatgg ttaaatccag agccccagat ctggcctgtt ccgtctgttc gcccccggaa
      721 acgatcgcgc gaatttccct cgtgtgcgca tctacgacca gcaaagccag cgacgcccgc
      781 gccggcaatc gccgcaattg atcggaggcc agccgttcaa gagcgaattg caacggcaga
      841 tcgagggtcg tcgtgacctg tgccggcccg gcaagcctcg cgactgcctg tggcgcgtgg
      901 cgcggcaatg gcagccgtgc cctcggaacg tctcctccgt ccgcggccag aatgcgatcg
      961 cgcacggcat gtgccgcctc cggatgccgg tccggccgca gtgcttcggg tcgccgcggg
     1021 atgcccacca gcaatgctgc ctgtgccgta tcaaggtttc gggcagacgc accaaaccat
     1081 gccatggccc cggcccgaac cccttcgaga ttgccgccgt atggcgccaa ggtcagccac
     1141 atgccgagga tttcgcgctt ggaaaaatgc cattcaagct ggaacgcccg tgcaatttcc
     1201 accagtttcg atcggaccgt tctgggccgc ggttccagca ggcgagcgac ctgcatcgta
     1261 agagtcgagc cgcccgacac gatccggccc gcgcgcaggt cctgggcgga ggctcgcagt
     1321 aacgaaatcg ggttgacgcc ggggtgaatc cagaaatgcc tgtcctctgt cgagaccagg
     1381 gtacgcagca gaaccggcgc cacgtcgtca gccgacgccc tgaaccgcca aacgccgccg
     1441 ggtgccggca atagcgcgac agttttgccc tgacggtcga gcacttcagt cccgttgctg
     1501 gagagtcggg tcaggttgag tggaaacaag cggtcaagga tcaaagcggt tccggccagc
     1561 acaaccaatg ccaggccgag acaggtcgat acgcgacgga tcatcgcgta tcgcctgtgc
     1621 ggcacggacc caaactggct cctgccaacc aaaccaacct gggcggctca gacctcactc
     1681 cgcactcaac acgttgatcc gtgctgcggc ctgatgggcg aacacagccg gccggtacat
     1741 gtcggcaacc tcggcaccgg gaagttcgaa ggcaccggga gtgaccgcac gcaaccgcac
     1801 ggcaacgcga aatcccggtg catcggatgc gagtgataca acggcggcat aacgatcatc
     1861 cgcggccggt tgcgcatcgg tggccgagag tttgtccaac caggccatgc ccggcacagc
     1921 accttcgttg aaccggctga ccacctccca cccggcgggc agtccctggg cgatcagcgc
     1981 atgatgatcc tggccatcct cggcacgacc ctccagcagc agcacaaatg tcgtgttctg
     2041 ccgcagcgta tccagatcga gcggcgtgcc atcctcatgc aggaacttcc gggttatgcg
     2101 catgccggac cgagcggccg gcggcgcctc tgacagtacg ccggtgacgg acacggactg
     2161 ccagaccgcc cggtcaccga gattgcggac agtgaccgga ccactcagtg cggaggtgat
     2221 cgtcgccgct gccggaaact ctttcccgtc catgcggatc cgggccggtt gcccatcctt
     2281 gccgagtgcc gcagcggcag cgactgccca cgctgactcc tgggtggaga gggaatcggg
     2341 ttgcaggtcg gcgccgggga gggcggctgt cagcgcggtc aaccgctccg gcagcacacc
     2401 gctttccttc agcagcacga cgatcgccag ttgatcgcgc aatgcactgc cgtaatcctt
     2461 gtaccaccat ttccgcgccg gcgagtccaa cgccgcggcg aacgcggctt ccgctcgtgg
     2521 ccggtcgtgc gccagcatca gagccgcacc aagctgtgcc ctggcgagcg gtgtcggcaa
     2581 ctggtcgaga tcctcggcca gaactcgagc ggcgccgggt aatccctgtc cggcacgagc
     2641 cagcacgtac aggcgataag cctgcgcaga tttggcctcg ggatcaccgg gttcgtcatc
     2701 tgccgcctga cgcatgaatt tcagcgcgtc ggccagcgcc ggatccggca ccactgcgcc
     2761 tgccgctttg gcacgcaaca ggaaatcgac ggcatagggc gtcagccacg gctccgcatc
     2821 tccggcggcg gtccatagcg cgaacccgcc gtcgaagcgt tgtctgtcca ggacagatgc
     2881 gaccgcggtt tgcaagcggc ccgcgcgatc gtcgcccacc attggcccgt ccggcaatac
     2941 tgccaagggg aacccacggc tggtgctttg ctccaggcag gaccagggat aatccgcgag
     3001 ttcctgaaca acccccgcgg cgtcatagcg aaccggtcca ccaattctca ccgaggcttt
     3061 ccaggtccct ggaatgaacc ggtccgtggc cggcgtgatc cgggcgtccg tgcctggctg
     3121 cagctcgtta ctcgcaacaa tcgacgaaag gccgcgcgac ggccgcaccg tgatcgccgt
     3181 gtcgcgtagc aggttgaagc cgccaggtcc ggtaatcgtc agcttcacga caccgcgtcc
     3241 ggcgccggtg gcgtgcaagg tggtcccggg taccgcgcgt tgacctgtct ccaacaccgc
     3301 ggagacggtg tttgaaccga cgattgtcaa tggtccgtcg gtcgagatga cagccttcgc
     3361 ctcgcctgcc ggcaggtcga tattgtgtaa caataccgcc agccgcgcat cgtcgccggg
     3421 agcgagaaag cgtggcagca atgcttcggc aatcaacgga tcgcgcacca caaggtcgct
     3481 cgccgccgcg ccgatcttgc tgccatgcca ggccacgacc atcagccgca cctgaccgtt
     3541 gaagtccggg agttcgaccg ggatggtcgc agtgccgtcc gcacccgcct gcactggcgg
     3601 cgtgaacagt gtcaccgtgc ggatcggaat gtccggcaac ggcgtgccgt cgtcgtcccc
     3661 gccttgtttc agcaccgtcg ctgccccgtc gcttggtgcg atcaaccggc cccagtcgtc
     3721 gcggatatca agacccaatc gccggcgcgc cagataatgc gccgcgggat caggggacac
     3781 gaaccgcgtg aggcgcagaa tgccctcgtc aacgactgcc atggtgagcc atgcgccggg
     3841 ttcagctttc accggcacca tcaggcggcc acgcggcagc gtcttgtcag gaaccgtaat
     3901 actgacaggc agcatacgcg ctgagggatc gacgccgacc caggtcagtc cgagggatcg
     3961 tccgggacgg gtgcccgcac cgccgcggaa gacatggacg gcgacgtagg caccaggccc
     4021 ccaactcgca tcgaccggca cgtcaactgt ggtcccgcct tccggcacag tcagatcgcg
     4081 tgacgccagc accttgtccg atagcacgag caacgttgcc tcgccggcaa acggcggcgc
     4141 gatatggatc cgcaccgatt gaccgaccgg caccgtcttc ctgtcggcag acacatcgac
     4201 ccggtcgggc acatccgggc tgtccgacga ggcccaaccg gagcggaagc gatacgacgt
     4261 tatcgccatc ccgtttgcct gcgccacctc gatccggtag cggccgaaat cgagtcgttt
     4321 ggcgtaatgg aatggttgcg tgtccgaaag cgagacgtcg cttgtctcca gcggctcatc
     4381 cttccagacc gtttcgtatc gtgcgagcga gccgcgcatg accattcgcc agtccggccg
     4441 ttcccgcacc aggcgcagtt tcgccgccat cgaagtgcgg ttgccagtcg gatcaaccgc
     4501 tgcgatgtcg aacgccgcct cggtttgcgc atccaccgca tcgtccggga acaggggttt
     4561 gatgccgatg aagggtcccg ctggccgcac cgggatagac acactggcgc gcgacgctcg
     4621 tccggcgggg tcgtcgacct cgacgtcgat ctgggctttg accggttggg ttacgtcggg
     4681 agcctgatcg attgtgaccg gcagagtggt gtgaccctcg gcatcagtct ccgccatctc
     4741 caggtcgcgg gattcaggcg cataggtctc gccgaccagg ccgatatgat agccggttaa
     4801 agcgggaaac gggtcgggat cgagcaccag cttcaacgtc gccttgccgg tgagacccgc
     4861 ggccggcgcg ccataaagaa accgggcgga aaccggaatg tcactggtgt ggccggggac
     4921 cagcgccggt ggcaaaggcc cggcttcgac cgccatgcgg tccggcacga aagcatcgac
     4981 gcgaaaatcc atggagccga tcggcggtgc cttcggatca gcgttgacct cgacgtgcca
     5041 ggttcccgcc gcggcgccgg atgacaggac caccggcagg taaagcgacg cgtcgcccgc
     5101 atggggtggc gttgcgcgta ggaaaacctg gccgttgggc cgtttgatcg tcaccgtcgc
     5161 cggaatatcg agcggcactc cggctgaatc acgcagcatc gccatgacct ggacggtttc
     5221 gcctgggcga tagatcccgc gatccagcca gacataggca tcgattggtc cgggatgcgg
     5281 gatcccttcg acaccgcggt cggacaggtc gaaggatgca acattcaggt cgagcgctgc
     5341 gaaatcattg tcagcaccaa atgcgtgaag cgcggccggc gcttgcggac cttcacccag
     5401 cagcaacgat tgcgggaacc gggcgaagcc ctgggcgtcg gtccgcgcct cggcgaggat
     5461 gtcgttgttg actgccaaca acgccagtcg cacgtcgggc cgcggcttcg catccgaata
     5521 ggctcgcacc tgaacggtca atccgtctga gcctcgccaa accgtgggag ccaggtcggt
     5581 gcgcagaatc gtctgaacgg ccgaggagtc atcgtctttg ctcgtgccgt cgcccggcgt
     5641 cgcaatcaat tcgtacaacc caggcccgga ggcgacgagg gcatcgggga tgggcagggc
     5701 agtgcgaacc ggtttgtttg gctcccatgt cgtcacctgt gcggttccgg tccaaacctc
     5761 gcggccggac tgatcggcaa ggttgttggc gcgccaaagg tcgaccgcct cacccaactt
     5821 tgagtcgcgg agatattgcg cgacattgcg ctcggtcagt cggatcaacc gtaacgatac
     5881 cgccgacagg ttcaccgtgg tcattgtcat cgacagcgac tgaccgcgcg gcaacacaaa
     5941 gacgcgagta tcgaaaacga tgcgccgagg cagattgggg accgcgatcg gcagcgtggt
     6001 ctctttgacc agcgtgaggc cgccttcgcc tggcattccg gcccgcagcg tcagttgtgt
     6061 cgtggtgccg ggaggcaagc cggagacaca aatctgatcg ccctcgcgag tcaccgcgct
     6121 gtcgggcacc ggcggcgtca ggcgaaccca gtcctggggt gcgaagtccg agtggcggac
     6181 cggcggaaca gtaaactcca cgcaggcacg cggcggatcg gcgtcggtct cgtcatggac
     6241 cttgcgcacg agtacgccga ctgcgtgctg catgtcagtc agcgactttt ggtacgccgg
     6301 attgtcagga gcccgctcca ccaccgcctg ccacaccaga actgcctgcc catcgcggtc
     6361 cagcgcgtgc aacgcatcgg ccatcagcag aagcccagga acttcggccg tcccgggctg
     6421 gctgccggag accgccatcc aggcggcata caacgccagc cgtggattgg gaggcgcgcg
     6481 tcgcgactgt gcggttgcca gatccagata ttgctttgcg gtggcatcac cttgcgcaat
     6541 gcgggtttca agcgctgtcg ccgcggccgg ccagtcctgt tttgcgagtg ccgcggcagc
     6601 ctgttgctcg gcagcatgcc gcgcggccgg tgtgctgccg gcgggaaagc gcttagtcag
     6661 actggtgaca tacgcctgcg agtcatgttg caggccgggg aggtcgacag gatcggcacg
     6721 cgacgtcgcg agacccaata ggatgaagca aagcaggagc aggattcgga ggcccattgt
     6781 acgtctcccc agccgatttg atcgtcgtgt agcagagcgc aagatcgttg atagaatgca
     6841 actgaaatgg ttaacggtta attgcatcac ccgagcagcg tggcagcatc gggcggtgaa
     6901 ttggccgcgc atgccgggaa ccgctttgca tgcactgcca ggaccatagg cgcgatcggc
     6961 gtactgcggt tcaaaaagcc ggaacacgtc acctaaagaa gtttggcgtc gatgtcacaa
     7021 tcgggagaag gcgggttggt ccg
//
LOCUS       DATAVD010000174         3468 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_16775, whole genome shotgun sequence.
ACCESSION   DATAVD010000174 DATAVD010000000
VERSION     DATAVD010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3468
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16775"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..311
                     /locus_tag="VHX39_03245"
     CDS             <1..311
                     /locus_tag="VHX39_03245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEX3990173.1"
                     /translation="FLLRQGFEVTPVNPGLAGQEILGQRVVANLAEATPLDMVDLFRN
                     PAEVEAPVREAIRLGAKTVWMQLGVVNETAAQLARDAGLTVVMDRCPAIEMPRLGLAK
                     "
     gene            complement(398..1597)
                     /locus_tag="VHX39_03250"
     CDS             complement(398..1597)
                     /locus_tag="VHX39_03250"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEX3990174.1"
                     /translation="MSLTDLAEGELARSGLRLAFASELEVRYRLDTAAERSRELRKIL
                     QIGTFLYFGIGVIMKLAGVTHASWRDCLLQLVGVSAAVLIASNFFRPKTVYVLRETTV
                     LGCCLAASLGAILVTYGKPETTQDLIIAALPANFVLMFVRLKFPFAAGFALVTFGSYT
                     ATILLRPAMALPHQMFLIVFMAILCLPALIGVHALEQASRRNYLHGLLQRLHIEDLAV
                     KNSTLALLSLTDPLTQVANRRRLDTELRAFCADEAQSGALLLIDVDRFKTLNDKYGHR
                     AGDLCLQQVAERFSARLRQCDLLARFGGEEFAVLLPRAGISEAVNVAEGLRAAIQARP
                     FVIEGAQLSITVSIGIAVLSSDMAPETLIEAADSALYSAKNAGRNQVRVYGTRVSPRR
                     QQRNDRF"
     gene            2041..2445
                     /locus_tag="VHX39_03255"
                     /pseudo
     CDS             2041..2445
                     /locus_tag="VHX39_03255"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
     gene            2494..>3468
                     /locus_tag="VHX39_03260"
     CDS             2494..>3468
                     /locus_tag="VHX39_03260"
                     /inference="COORDINATES: protein motif:HMM:NF012612.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEX3990175.1"
                     /translation="MLHDFSFRSGDQLLAGLTGKSMAEVSRMAHQTENVPAPAMAMSE
                     SVSDSQAMSQMPMGSMAMMSGPMPGMQMTSGTAMDLNDINYDAFLANERTLDDPEIVR
                     VARSGRLRLRIINGASSSQFWINLGALEGRVVAVDGHGVMPVRGSRFPISMAQRLDVL
                     IDVPAEGGAFPILAELEGTGKRTGIVLATNGARIPRIAQVSGTIAQPIDNRLEVRLTA
                     RRPLAPRTPDLRHRIVLSGSMQPYAWALNGEYWPNITPLMLTKGQRVEIEMVNHSMMA
                     HPMHLHGHAFQVIAVNGKPINGAVRDTVLVTPMMGSVRIAFDADNPGRW"
BASE COUNT          711 a         1056 c         1035 g          666 t
ORIGIN      
        1 attttttgct ccgtcagggg ttcgaggtga cgcccgtgaa tccgggcctc gccggccagg
       61 aaattctcgg gcagcgggtc gtcgccaacc tcgccgaggc gacgccgctc gacatggtgg
      121 acttgttccg caacccggcc gaggtggaag cgccggtgcg cgaggccatc cgcctcggcg
      181 cgaaaacggt gtggatgcag ctcggcgtgg tcaacgagac ggcggcccaa ctggcgcgcg
      241 acgccgggct gaccgtggtg atggaccgct gccccgcgat cgaaatgccg aggctggggc
      301 tagcgaagta gccgctcgtc acggcggctt tgcgcccaag cccggcgttc cgtcgtctcg
      361 ccgcgggatg caaaagcaga catacgagca ggtcactcta aaagcggtca ttgcgttgtt
      421 ggcgtcgtgg agagacccgg gtcccgtaaa cgcggacttg gttccgcccc gcgtttttgg
      481 cgctgtataa tgccgaatcg gccgcttcaa tcaaggtttc cggcgccata tcggagctga
      541 gcacagcaat gccaatgctt accgttatac ttaattgcgc gccttcaatc acgaacgggc
      601 gcgcctgaat cgccgcgcgc aagccttccg ccacgtttac ggcttcgctg attcccgccc
      661 ttggcagcag tacggcaaac tcctcgcccc cgaaccgtgc caacaagtca cattggcgca
      721 gacgcgcaga aaaccgctca gccacctgtt gcaggcataa atccccggcc cggtggccat
      781 acttgtcatt gagcgttttg aacctgtcca catcgatcag cagcagcgcc ccgctctgcg
      841 cctcgtccgc gcaaaatgcc cgtagttccg tatccaggcg gcggcggttg gcaacctggg
      901 tcaacgggtc ggtcagggaa agcaacgcaa gcgtgctgtt tttcaccgca aggtcttcaa
      961 tgtgcaggcg ttgcagcagc ccgtgaaggt aattgcggcg ggaggcttgt tctagcgcgt
     1021 gcacgccgat caacgccggc aggcacagga ttgccatgaa tacgatgaga aacatctggt
     1081 gcggcagtgc cattgcaggc cgcagcaaga tagtcgctgt atagctgccg aacgtcacca
     1141 acgcgaagcc ggccgcgaat ggaaacttta ggcgcacaaa catcaaaaca aaattcgccg
     1201 gcagcgccgc gatgatcaaa tcttgtgtgg tttccggctt gccgtatgtc accagaattg
     1261 cccccagact ggcggccagg caacagccta aaactgtcgt ctcacgaagt acgtagacgg
     1321 ttttcggccg gaaaaaattg ctggcgatca acaccgccgc cgacacgcca accaactgca
     1381 gcaaacagtc ccgccaggat gcgtgggtga cgccggccag cttcatgatc accccgatgc
     1441 cgaaatatag aaacgtgccg atctgcaaaa ttttgcgcag ttcacgcgaa cgctccgccg
     1501 ccgtgtcgag ccgataccga acttccagct cagatgcaaa agcaaggcgc agtccggatc
     1561 gcgcgagctc tccttcggcc aaatccgtca gggacatacc gagctgccac agatcgcgaa
     1621 gatcgctgcc tccatctcac gggcctttcc taccaaaccg atattatctc tctttcaatt
     1681 tatcctgcga ctgtaaaatg ttagtcgtgg cctatttgat cgcaggcggc tgcactggcg
     1741 ctcgaagcac agccttgtct atggcaccaa cgatctgatc gataataagc tggcggccac
     1801 tgtcgagatc gaagcgaccc ggtacgatgg caggccgatg tcgcggcaac caagacggat
     1861 ggttgctggc tgactcccct gtgtgccgcg catgggaggt caggcacatg gtgccttgac
     1921 cttcctatca tgggaacctc catctgcgac gggaatggag ttctggcgaa tatgcgcgcc
     1981 ccggcggggg catcactgaa ggatcgtaag ctcgtgaata atctctctcg gcgtcggttt
     2041 atggggactg cggtcgccgt cggaacgcta cctgcttttt gccatgccgc ggcggcggct
     2101 gttccgccaa tcaagcgcct tgtggccgac acccgcattc tcgacgtcaa cggcaagtcc
     2161 gccaaggtgt tccggcttac cggcccgaac ggaacacccg gcctgtccct cgcccccaac
     2221 gagcggttcc gggtggaact cgtcaatcgg ctcgatacaa gcacgatcat ccattggcat
     2281 ggtcagctgc ctccctggac tcaggacggg tttccttggc cccagacacc cgcgatcaaa
     2341 tccggagaaa ccagcgccta tgactaccag ccgatcccag gcacctattg gatgcactcg
     2401 catgaggggc ttcaggaaca aggcctgatg accgccccgc tgatcgttca tgacgcggcg
     2461 gaccttgcgg aagatcggca ggaaattgtc ctcatgctgc acgatttcag cttccggtct
     2521 ggggatcagt tgctcgcagg cttaaccggc aagagcatgg cagaggttag ccgtatggcg
     2581 caccagaccg aaaacgtccc cgccccggcg atggccatgt cggaatcggt gagtgacagc
     2641 caggccatgt cacaaatgcc aatggggtcc atggcgatga tgtcggggcc gatgccgggc
     2701 atgcaaatga cgtccggcac ggcgatggat ctcaacgaca ttaattacga tgcgtttctg
     2761 gccaacgaac ggacgcttga cgacccggaa attgttaggg tggcgcgatc cgggcggttg
     2821 cgtctgcgca tcatcaacgg ggcgtcgtcg agccagttct ggattaatct cggcgcgctc
     2881 gaaggccgcg tcgtggccgt cgatggccac ggggtgatgc cggtgcgcgg cagccggttt
     2941 ccgatctcca tggcccagcg tcttgacgtt ctgatcgatg ttccggccga aggtggtgcc
     3001 tttccaatcc tcgcagaact tgagggaacc gggaaacgca cggggatcgt tttagccaca
     3061 aacggcgcac gtatcccgcg tatcgcgcag gtgtccggga ccatcgcaca accgattgat
     3121 aatcgcctgg aagtgaggct gacggcacgc cgtcctctcg cgccacgcac gccggatctg
     3181 cgacacagga tcgtgctttc cggctcgatg cagccttatg cgtgggctct gaatggggag
     3241 tattggccaa acatcacgcc gctcatgctg accaaggggc agcgtgtcga gatcgaaatg
     3301 gttaatcatt caatgatggc gcatcccatg catctgcacg gtcatgcatt ccaggtgatc
     3361 gcggtcaatg gaaaaccgat caacggggcg gtacgggata cggtcctggt aacgccgatg
     3421 atgggcagcg tccgcatcgc cttcgatgcg gacaatccag gccggtgg
//
LOCUS       DATAVD010000175         3149 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_202201, whole genome shotgun sequence.
ACCESSION   DATAVD010000175 DATAVD010000000
VERSION     DATAVD010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3149
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202201"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..971)
                     /locus_tag="VHX39_03265"
     CDS             complement(<1..971)
                     /locus_tag="VHX39_03265"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010514246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex E1 component
                     subunit beta"
                     /protein_id="HEX3990176.1"
                     /translation="MATQILMPALSPTMTEGKLARWLKHVGDDVRAGEVIAEIETDKA
                     TMEVEAVDEGKLAQILVDEGTEGVPVNTPIAVLSMNGETVALAPKASPATAAAPVEAP
                     APAAPATPATHAVPPAAVAAAPEKDWGPSAPITVREALRDAMAAEMRADKDVFLIGEE
                     VAQYQGAYKISQGLLEEFGARRVIDTPITEHGFTGMAVGAALNGLRPIVEFMTFNFAM
                     QAMDQIINSAAKTLYMSGGQMGCPIVFRGPNGAAARVGAQHSQCYASWFAHVPGLKVV
                     SPWSAADAKGLLRAAIRDPNPVIFLENEILYGHTFDCPTDPDFVLPIG"
     gene            complement(975..2033)
                     /gene="pdhA"
                     /locus_tag="VHX39_03270"
     CDS             complement(975..2033)
                     /gene="pdhA"
                     /locus_tag="VHX39_03270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HEX3990177.1"
                     /translation="MAQTAETRKPEKAQGKTSAKAAGKGSAKQSGPAVDRSQLLNAYR
                     TMLLIRRFEEKAGQLYGMQLIGGFCHLYIGQEAVVTGMQMAISEGDEVITSYRDHGHM
                     LATGMEARGVMAELTGRAGGYSLGKGGSMHMFSKEKNFFGGHGIVGAQVSLGNGLAFS
                     NWYRGNDRVCLTYFGEGASNQGQVYESFNLAALFKLPVVFIIENNKYGMGTSVERASA
                     SHDLSKNGVPWSITGAQVDGMDVLAVKAAAEVAVAACRAGKGPYLLEAKTYRYRGHSM
                     SDPARYRPREELQLMRSQHDCIEHARQLLAIMGVEDKQFKTIDDEVKAIIQDAADFAQ
                     ASPEPDPAELWTNVLLEG"
     gene            complement(2315..>3149)
                     /locus_tag="VHX39_03275"
     CDS             complement(2315..>3149)
                     /locus_tag="VHX39_03275"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HEX3990178.1"
                     /translation="DAFTHIIGHLTDFALHVAPTIADIDSGTDAVHQMRVAVRRARSA
                     FALLPARIDNPCHTGAAEGLKQLGQMLGPARDWDVFMTETAPPVEAVLPEQPALHSLL
                     RAGARRRQTARAALADYLHSPAFRRLALELACLAAEDPPADDTPDTPLAEFAASVLRR
                     RWKKLLNAGRALEDLDNQALHGLRLKAKRLRYAAEFFAPLFPEKPTARFIRRLAVLQE
                     RLGLFNDTTVAEGLLRDLNAKQGYAAGLVLGFTAARGARSRQKIATSWARFRRRNPFW
                     N"
BASE COUNT          572 a          985 c          950 g          642 t
ORIGIN      
        1 ccgatcggca gcacgaaatc cggatcggtc ggacaatcga acgtatggcc atagagaatt
       61 tcgttctcca ggaagatcac cggattaggg tcgcggatcg ctgcgcgtaa caagcctttg
      121 gcatccgctg ccgaccaggg cgaaacgact ttaagtccgg gcacgtgtgc gaaccaactg
      181 gcatagcatt gcgagtgctg cgcgccgacc cgggccgctg cgccgttggg accgcggaac
      241 acgatcgggc agcccatctg accgcccgac atatacaagg tttttgccgc cgagttaatg
      301 atctggtcca tcgcctgcat ggcgaaattg aaggtcatga actcgacgat cggccgcagg
      361 ccgttcagtg cggcacccac cgccatgccg gtaaacccgt gttcggtgat cggggtatcg
      421 atgacccgcc gtgcaccaaa ctcctccagc aggccctggc tgattttgta ggcgccctgg
      481 tattgcgcga cctcctctcc gatcaggaac acgtctttgt cggcgcgcat ttctgccgcc
      541 atggcatcgc gcaacgcttc gcgtaccgtg atcggcgcgc tcggacccca gtctttttcc
      601 ggggcagcgg ccaccgccgc cggtggcacc gcatgagttg caggggtggc cggagcggca
      661 ggcgccgggg cctcgaccgg agcagccgcg gttgccgggc ttgcctttgg cgccagcgcc
      721 acggtttcgc cattcatcga caacacggcg atcggggtat tcaccggtac gccctcggta
      781 ccctcgtcaa ccaggatttg tgccagtttc ccttcgtcga ccgcctcgac ctccatcgtt
      841 gccttatcgg tttcaatttc cgcgatcacc tcgccggcgc gcacgtcgtc gccgacatgt
      901 ttcaaccagc gagccagctt gccctcggtc atggttgggc tcagcgcggg catcagtatc
      961 tgcgttgcca ccgctcagcc ctccaacaac acattggtcc acaactcggc cggatcgggc
     1021 tcggggctgg cctgagcgaa atcggcggca tcctggatga tggccttcac ctcgtcgtcg
     1081 atggttttga attgtttgtc ctcaaccccc attatcgcga gaagctgacg tgcatgttca
     1141 atgcaatcgt gctgcgatcg cattaattgc agttcctcac gcgggcggta gcgcgccgga
     1201 tcggacatcg aatggccgcg gtagcgataa gtttttgcct ccagcaaata gggccctttg
     1261 ccggcgcgac aagcagccac cgccacttcg gccgctgcct tcaccgcgag cacgtccatg
     1321 ccgtcgacct gcgcaccggt aatgctccag ggcacaccgt tcttcgacag atcgtgcgag
     1381 gccgaggcgc gttcgacgct ggttcccatg ccatatttat tgttttcgat gatgaacacg
     1441 acgggcaact taaacagcgc cgcgaggttg aagctttcat aaacctggcc ctggttcgac
     1501 gcaccttcgc cgaaataggt cagacagacc cggtcattgc ctcgatacca gttcgaaaac
     1561 gccaggccgt tgcccagtga tacctgtgct ccaacaatgc catgtccgcc gaagaaattc
     1621 ttctctttgc tgaacatgtg catggagccg cccttgccaa gcgaatatcc gcccgcgcgt
     1681 ccggtgagct ccgccatcac cccgcgtgct tccatgccgg tcgccaacat gtggccgtgg
     1741 tcgcggtatg acgtgatgac ctcgtcgcct tcggagatgg ccatttgcat gccggtgacc
     1801 accgcttcct ggccaatata caaatggcag aagccgccga tcagctgcat gccataaagc
     1861 tggccggcct tttcctcgaa ccgtcggatg agcagcatcg tccggtaagc attcagtagt
     1921 tggctgcgat cgacggcagg accggattgc ttcgccgatc ccttgcccgc agccttggcc
     1981 gatgtcttgc cctgagcttt ctcaggtttc ctggtttccg ccgtttgtgc catacttatg
     2041 cgcccccgct accatgggtc ggagttcccg gtcatctaag ggcgcatggg ccttaccgac
     2101 aagcgtcgga tgtgtgaaat ccctgatgat gcaatgcgaa atccacaatt aaccagtttc
     2161 tggttaattg cgtgacatgc cgtgtggacc atggaattcg gactgaggcg aattgcggta
     2221 gggcgcatct ttgcgcaata ttatttcatc acaggcggat atttcgcagc gtccttgcgg
     2281 ttggcgcggt ctgccgcaat accgacgcaa gggttcagtt ccagaacgga ttgcggcggc
     2341 ggaatcgcgc ccaggaggtg gcgattttct ggcgggagcg ggcgccgcgg gcggcggtga
     2401 agcccagtac caggccggcc gcatagcctt gtttggcgtt caggtcgcgc agcagaccct
     2461 cggctacggt ggtgtcgttg aacagaccga gacgctcctg caacacggct aaccggcgaa
     2521 tgaagcgcgc ggttggcttt tccgggaaca gcggggcaaa aaattcggca gcgtagcgca
     2581 gtcgtttggc cttcagtcga agcccatgca gcgcctggtt gtccagatct tccagtgccc
     2641 gtccggcatt cagcagtttc ttccagcgcc gtcgcagcac ggaggcggcg aattcggcca
     2701 acggcgtgtc cggtgtgtcg tcagcgggag gatcctcggc agccagacag gccagttcca
     2761 gagcgagccg gcgaaacgcc gggctgtgca gatagtcggc cagcgccgcg cgggcggttt
     2821 ggcgccggcg tgcccctgca cgcaacagac tatgcagcgc gggctgttcg ggcaggacgg
     2881 cctcgaccgg aggggctgtc tcggtcatga acacgtccca gtcgcgcgcc ggcccaagca
     2941 tttgccccaa ttgcttcaga ccttcggcgg cgcctgtgtg acaagggttg tcgatccggg
     3001 ctggtaacaa cgcgaaggcc gagcgggcgc gacgcaccgc cacgcgcatc tgatgcacgg
     3061 cgtcagtgcc gctgtcgatg tcggcaatcg tcggcgccac atgcagcgca aagtcggtca
     3121 aatgtccgat gatatgagtg aacgcgtcg
//
LOCUS       DATAVD010000176         1844 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2250375, whole genome shotgun sequence.
ACCESSION   DATAVD010000176 DATAVD010000000
VERSION     DATAVD010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2250375"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1844)
                     /locus_tag="VHX39_03280"
     CDS             complement(<1..>1844)
                     /locus_tag="VHX39_03280"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX3990179.1"
                     /translation="NRFGATVGGPVEKSKIFFFGSYGGLREVTPQNYNTVVPDALQRV
                     GNFSENLPTSTTIAHGLGACATTLSAADKAVTAYGGRFIVCDPVTHQPVPGNRLDLDP
                     NYVPDPVAAAVLAKNVPLPSANRPTPDNRFVGNQGLPQENNEFLIKGDVQTFVNHRVT
                     LSYFQANGSQIELPSGGTLPGWALSNYAFRQQNGNASDVWTVTPRSVNQVWLNFSRML
                     AGRISDPAESLSAYGSDINVQGTPSLPNISVSNFFTLSNAISGPLAGDNIYGLRDVFS
                     TTRGRHTINIGGEIYLEKDRLETLLNNYGVFSFTSATVPSTATGQATYTRTGVAMSDF
                     LIGHPNTMSQDSPDDANENYWNYGFFAQDDWRVFPKLTLNLGLRYDVQTAPTDTQRRI
                     AVFEPGVQSTVSPSAMLGQLFPGDPGVPAGGVDTNYNHFSPRVGFAYDPYNNGRTVFH
                     GGAGLFFDTISGNEWMLSQNFQPFAVRETNAFTHVVSLQHIYSTDCQDFAGCVSPFPY
                     IYDKANPHYVSPASLVFVQKGMRWPYNVQANFGVQQQLTRDLAVGITYTGAFSRKIPL
                     FIDQNAPTYNTANPAANTTGDVNCRRPYDAIPFATTNTCANPAIGSKY"
BASE COUNT          383 a          452 c          595 g          414 t
ORIGIN      
        1 tgtacttcga gccaattgcc ggattggcac aggtgttcgt cgtagcaaag gggatcgcat
       61 catacggacg gcggcagttg acgtcgcctg tggtattcgc agctgggttc gcagtgttgt
      121 atgttggcgc attctgatcg atgaatagcg gaatcttgcg gctgaacgcc ccggtgtagg
      181 tgatgccgac tgcaaggtcg cgagtaagct gttgctgtac gccaaagttt gcctggacgt
      241 tataaggcca acgcattcct ttctggacaa aaaccagtga ggccggggag acgtaatggg
      301 gattcgcctt gtcgtagata tatgggaacg gcgaaacgca accggcgaag tcctggcaat
      361 ctgtcgagta gatgtgctgc aagcttacga cgtgtgtgaa tgcgttggtt tcgcgtacag
      421 cgaatggctg gaagttttga gatagcatcc attcattccc cgagatggtg tcgaagaata
      481 atccggcacc tccgtggaag acggttctgc cattgttata ggggtcatac gcgaagccta
      541 cacgcggcga gaaatgatta tagttcgtgt cgacaccacc ggctgggacg ccaggatctc
      601 ctggaaagag ctgccccagc atcgcgctgg gtgaaacagt cgactggaca ccgggttcga
      661 agacggcgat gcggcgctgg gtgtcggtgg gcgcggtttg gacgtcgtag cgcaagccaa
      721 ggttcaacgt cagtttggga aatacgcgcc aatcgtcttg cgcaaagaat ccgtagttcc
      781 agtaattttc attcgcgtcg tcgggcgaat cctggctcat ggtgttggga tggcctatga
      841 ggaagtcgga catggcaacg ccggttctgg tataggtcgc ttgtccggtt gcggtgcttg
      901 gaaccgtagc gctcgtaaag gagaagacgc cgtagttgtt cagcagagtt tcaaggcgat
      961 ctttttccag gtagatttct ccgccgatgt tgatcgtatg ccggccgcgg gtcgtgctga
     1021 atacatcgcg caggccgtag atgttatcgc cggccagcgg cccgctgatc gcattggaaa
     1081 gcgtgaaaaa gttggaaacg ctgatgttgg gcagggaggg tgttccctgc acattgatgt
     1141 cggaaccata ggcggaaagt gactcggcag gatcgctgat gcgtccggcc agcatgcggg
     1201 agaagttgag ccacacctga ttcaccgacc gtggcgtcac cgtccataca tcgctggcat
     1261 tgccgttttg ctggcggaag gcatagttcg agagtgccca tccgggaagc gtgcctcccg
     1321 atggcagctc gatttgcgat ccgttcgctt gaaagtagga gagcgtcact cgatggttta
     1381 cgaaggtctg aacgtcaccc ttgatcagga actcattgtt ttcctgtggc aagccctggt
     1441 ttccgacgaa gcgattatcc ggcgtcggcc ggttggcaga gggcaaggga acattcttag
     1501 ccagcacggc ggcggcgacg ggatctggaa catagttcgg atccagatcc agccggtttc
     1561 cgggcactgg ttgatgggtc accggatcgc agacgatgaa ccgtccgccg taggccgtaa
     1621 cggctttgtc cgcggcggaa agcgtggttg cgcaggctcc aaggccgtgg gcgatggtag
     1681 tggaggtggg aagattctcg gaaaaattgc caaccctctg caaggcgtcg ggcacgaccg
     1741 tattgtagtt ctgcggggtc acttcccgca gtccaccgta gctgccaaag aagaagatct
     1801 tgcttttctc tacggggccg ccgacagtag cgccgaaccg attg
//
LOCUS       DATAVD010000177         1572 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2808397, whole genome shotgun sequence.
ACCESSION   DATAVD010000177 DATAVD010000000
VERSION     DATAVD010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1572
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2808397"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            220..1566
                     /locus_tag="VHX39_03285"
     CDS             220..1566
                     /locus_tag="VHX39_03285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990180.1"
                     /translation="MTISRRESLTLASASIAAASIPTIGAHAAVTDVPTANVKPLDYK
                     LEKGAELRVLRPAKFIDPDEVYWRENTKKYTAATGIPVRVDFLSWEDIRPQTAVVANT
                     GAGPDIVVGFSSDPQIYVSKIADMTDLANYLGAKYGGWQELSVLYGTKWKTKDWISIP
                     IGGGAGPVVYRQSWVKAAGYDKIPEDLPGFLTLCQKLHAAGHPFGMSLGHALGDANGF
                     ASWLLWSHNAMLVDEKGKVALDSKETIAALKYATELQKTQVSGNLSWNDSGNNKAYAA
                     GDIGMTFNGVSIYYFLKNAPDPKLNQMAVDTQHQLLPKGFAARSPMSATPMNAMVFKH
                     TKYPNAAKDYLRFMMEADQYGPWLSNCIGYWSNSLKAYSKMKFWSDDPKLAPYAAGMD
                     TPYYDGFKGPVTPASSAVTANYTVVDMFASVVTGNATPEDAAKRGAQQAQRYYKNT"
BASE COUNT          324 a          501 c          482 g          265 t
ORIGIN      
        1 cttcgcccgc catgacgtga aggggatgcc aggggccttc gcccgccatg atgtggaggg
       61 gatgccggag gccttcgctc gccgtcacgt gggaggcgtg tcgcgagtgc cgccccttta
      121 cctttccgtc tcccccgggg aataattccc ctcaaggggc tccggatctc cggtcgccga
      181 gggcccttcg gcaaaagacc ggaaagggag cccaagacca tgaccatcag ccggcgtgag
      241 tcactcacgc ttgcctccgc gtcgatcgcg gcggcgtcca tccccactat cggtgcccac
      301 gccgccgtaa ccgacgtgcc cacagccaat gtgaagcctc tggactacaa gctggagaaa
      361 ggcgccgaac tgcgcgtcct gcggccggcc aagttcatcg atccggatga ggtctactgg
      421 cgggagaaca ccaagaaata caccgccgcc accggaatac ccgtccgcgt cgatttcctc
      481 agttgggagg atatccgtcc gcagaccgcc gtggtcgcca ataccggcgc cgggccggat
      541 atcgtggtcg gtttcagctc cgacccgcag atctacgtgt cgaagatcgc cgacatgacc
      601 gacctcgcca actatctggg agcgaaatat ggcggctggc aggaattgtc ggtgctgtat
      661 ggcacgaagt ggaaaaccaa ggactggatc tcgatcccga tcggcggtgg cgccgggccg
      721 gtggtgtatc gccagtcctg ggtgaaggcg gcgggctacg acaagatacc cgaggacctc
      781 cccgggttcc tgacgctgtg ccagaagctg cacgccgcgg gtcatccgtt cggcatgtcg
      841 ctgggccacg cgctgggcga cgccaacggc tttgccagtt ggctgctgtg gtcgcacaac
      901 gcgatgctgg tggatgaaaa aggcaaggtc gcgctcgatt ccaaggaaac catcgcggcg
      961 ctgaaatatg ccaccgaact gcagaagacc caggtgtccg gcaacctgtc gtggaacgat
     1021 tccggcaaca acaaggccta tgccgccggc gatatcggca tgaccttcaa cggcgtgtcg
     1081 atctactact tcctgaaaaa cgcgcccgat ccgaagctga accagatggc ggtggacacc
     1141 cagcaccagt tgctgccgaa gggtttcgcg gcccggtcgc cgatgtcggc cacgccgatg
     1201 aacgcgatgg ttttcaagca caccaagtat cccaacgccg ccaaggacta tctgcgattc
     1261 atgatggagg cggatcaata cggcccctgg ctgtccaact gcatcggcta ctggtcgaac
     1321 tcgctgaaag cctactccaa aatgaagttc tggtcggacg acccgaagct ggcaccgtac
     1381 gcggccggta tggacacacc gtattacgac gggttcaagg gtccggtgac accggcatcc
     1441 tcggcggtga ccgccaacta caccgtggtc gacatgttcg cctcggtcgt caccggcaac
     1501 gcgacgccgg aggacgcagc caaacgcggc gcacagcaag cgcaacgcta ctataagaac
     1561 acctgacggg tg
//
LOCUS       DATAVD010000178         3658 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3367991, whole genome shotgun sequence.
ACCESSION   DATAVD010000178 DATAVD010000000
VERSION     DATAVD010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3658
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3367991"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(207..1379)
                     /locus_tag="VHX39_03290"
     CDS             complement(207..1379)
                     /locus_tag="VHX39_03290"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3990181.1"
                     /translation="MNIALIDPSLFTLPYDRDLARGLEGAGHHVTLYGRRPGPDDGGT
                     GGISIAEHFYRLADKPAIRAAPSGIRLGAKGADHAWSMLRLLTRLRRNRPDVVHFQWL
                     ALPLIDGRLLPAFRRIAPLILTVHDTNPFNGNPSARLQSAGFLSALRRFDALIVHTRQ
                     GLERLTARGLASERIKVLPHGLIEDTSTPQPVLDHTEAPETTFLLFGKMKPYKGIDLL
                     IKAFAQLSPELQNRARLRIVGKPYFDLGPLHSLASQLGVADRVAIEPRFVADDELPAL
                     FGPGTVAVFPYREIEASGVLTLAIRYGRPIVASRLGGFAETIVDGEHGHLVDPGDIVS
                     LAAALRHMAQEPQFVASCAAAVQHAARSGPKWADVARDTAALYATVRSWRENPYGG"
     gene            complement(1376..2542)
                     /locus_tag="VHX39_03295"
     CDS             complement(1376..2542)
                     /locus_tag="VHX39_03295"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3990182.1"
                     /translation="MSIALLVLGVLLACAAVHPFVTYPLSLTLFAHIRRRSQAGTGAH
                     GFVPQRVALCVCFYNEERVVRRKVENMLAMRAAAPGLELLAYVDAATDRTADILGEYA
                     DKLRLVVSPRRLGKTEGMNTLVGMTQADIVVFSDANVMFASDAIPQLLSTFAAPDVGC
                     VCGHLVYGRGTDSPTAATGSLYWRLEEKIKELESASGSVMGADGSIFAIRRALHVCPP
                     SDLIDDMYVSLSVLGQGARIVRADDALAFEETVSLPHEEFRRKIRIACQAFNVHRALH
                     SQIAKLSLFDQYKYVSHKLLRWLTAYLLAGSFACIMAGLLVDDAWQPAAALVSFTVLS
                     SVLIWRTDRGRFGQIRAILAAFIATAIGVWFSVRGERFQTWNSPQSARDMVPGT"
     gene            complement(2539..>3658)
                     /locus_tag="VHX39_03300"
     CDS             complement(2539..>3658)
                     /locus_tag="VHX39_03300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990183.1"
                     /translation="PGVRSARSDLAAIRGQIADQARRIVSSLGAQLQVARAHEADVKQ
                     QLVQARETAVKAQNTEAQLKELQADADSQRRVLQQLLIQAQQVVGPTGQAANNIPDVR
                     LLSGAVPSDVPSAPNTKMAGGMGLAGGAVLGCLLAFIRGVRTFGFADADGLATIADIS
                     NVVTLPGTGRGALVKRVTEEPGGVEAEALRLLRARLRSLAYAPRNVVFTALTCDPAVI
                     ATAFARVAAMSGERVLLAEGALAKPGIGKLLGLRDGAFDRVLRGDEDWHDVVEADPDT
                     PLDVLGSSEPASDQESLLASVALQNLLMEAREDYSMVVIAAAGDENAAVGTLAQRTDA
                     MVLVVDGRRDNQAAVRELAQHLTALSRSPVLGLLVTPA"
BASE COUNT          759 a         1190 c         1068 g          641 t
ORIGIN      
        1 gaaactctga tcgctggttc aaatcccact ggtgatgacc ggcgcatctt tgggcctgct
       61 ccgctattcc atttcggtgt taccgcctct aaagcaaatc atcaaagcgt gcgcgcacgg
      121 atgtggcagg tcaggacaat gtcatgtcga tgtcgggtca tgaagggcaa tagctgacca
      181 ccctcgacat cgggggccgg cggctgtcat ccaccgtaag ggttttcgcg ccacgaccgc
      241 accgtggcgt acaatgcggc agtatcccgc gcgacatccg cccattttgg cccggatcgg
      301 gcagcgtgct gcactgccgc agcacaggac gcaacgaatt gcggctcttg cgccatgtgc
      361 ctcagggctg cggccaaaga gacgatatca cccgggtcga caagatggcc atgctcgccg
      421 tcgacgatcg tttcggcgaa accacccagc cgagatgcaa cgatcggccg tccgtatcgt
      481 atcgccagcg tcagaacgcc actcgcctcg atctcgcgat agggaaacac ggcaacggtt
      541 ccaggaccga acaatgcagg cagttcgtca tcagcgacga agcgcggctc gatcgcaacc
      601 cggtcggcga cgccaagctg gctggcaagc gaatggagcg ggccgagatc gaaatacggt
      661 ttgccgacga tgcgcagcct ggcccgattc tgcaattccg gtgacagttg ggcgaaggct
      721 ttgatcagca gatcgatacc cttgtagggc ttcattttcc caaataacag aaacgtcgtc
      781 tcaggggcct ccgtatgatc gagcactggt tgtggagtgg acgtatcctc gatcaggcca
      841 tgcggtagaa ctttgattcg ttccgaagcc agcccgcgcg ccgtgagccg ttccaatcct
      901 tggcgcgtgt gcacgatcag cgcgtcgaac cgacgcaacg cgctcaggaa gccggcactc
      961 tgcagccgtg cagagggatt gccgttgaac ggattggtgt cgtggactgt caggatcagt
     1021 ggggcgatac gccgaaaggc cggcagcaat cggccatcga tcaacggcag agccagccat
     1081 tgaaagtgga cgacgtcggg tcgattccgc cgcaaccggg tcaacagccg caacatcgac
     1141 catgcatggt cggcgccttt ggcccccaat cgaatgccgg acggcgccgc gcggatcgca
     1201 ggtttgtccg ccaggcggta gaagtgttcc gctatcgaaa tgcccccggt cccgccatcg
     1261 tccggtcccg gacgcctgcc atacagggtg acatgatgtc ccgcaccctc cagaccgcgt
     1321 gcaagatcgc gatcatatgg caaggtgaac aacgacggat cgatcagcgc gatattcatg
     1381 ttccaggcac catatcgcgc gccgattgag gcgagttcca ggtctgaaaa cgttcgccgc
     1441 gcacggagaa ccagaccccg atcgcggtgg cgatgaaggc cgccaatatc gcccttatct
     1501 gcccgaaccg tccgcggtcg gtgcgccaga tcagcacact gcttagcacc gtgaagctca
     1561 ccagcgccgc ggcgggttgc cacgcgtcgt cgaccagaag gcctgccatg atgcaggcga
     1621 agctgccggc cagcagatag gcagtcagcc agcgcagcaa cttgtgcgac acgtatttgt
     1681 attgatcgaa caaggacagc ttcgcgatct gggaatgcag ggctcggtgg acgttgaatg
     1741 cttgacaggc gatgcggatc ttgcgccgaa attcctcgtg cggcagcgag acggtttcct
     1801 caaaggccag cgcatcgtcg gcgcgcacaa tgcgtgcccc ctgacccaat acgctgagcg
     1861 agacatacat gtcatcgatc agatcagatg gcgggcaaac atgcagtgcg cgacgaatcg
     1921 cgaagatcga tccgtcggcg cccatcactg aaccactggc actttccaac tccttgattt
     1981 tctcctccaa tcgccaatac agcgaaccgg tcgctgctgt cgggctgtcc gtaccgcggc
     2041 cgtagaccag atgaccgcag acgcagccga catcgggagc ggcaaacgtc gacagcaatt
     2101 gcgggatcgc atcggacgca aacatcacat tggcgtcgct gaacacgacg atatcggcct
     2161 gtgtcatccc gaccaacgtg ttcatgccct ccgttttgcc cagccgccgc ggcgagacca
     2221 caaggcgaag cttgtcagcg tactcgccta aaatgtccgc cgtgcgatct gttgccgcat
     2281 cgacataggc tagcaactcg agaccaggcg ccgcggcacg catggccagc atgttttcca
     2341 ccttgcgacg gaccactcgc tcttcattgt agaagcatac gcacaaggcg acccgttgcg
     2401 gcacaaaccc gtgcgcaccc gttccggcct gggaacggcg cctgatatgt gcaaacagcg
     2461 tcaggctgag cgggtatgtc acaaaaggat gcaccgccgc acatgccagc agtacaccca
     2521 gaaccaatag agcgatgctc acgccggcgt caccagcaag ccaagcacgg ggctacgcga
     2581 gagcgcggtg agatgctggg caagttcacg caccgcggcc tgattgtcac gccgcccgtc
     2641 cacaaccagg accatcgcat ccgtccgctg ggccaacgtt ccaaccgcgg cgttctcgtc
     2701 gccagcggcc gcgatgacga ccatgctgta gtcctcgcgc gcctccatca gcagattttg
     2761 cagcgccacg ctcgccaaca ggctctcctg atcgctggct ggttcgcttg atcccaatac
     2821 gtcgagcggc gtgtccggat cagcctccac gacgtcgtgc cagtcctcat caccgcgcaa
     2881 cacgcggtcg aacgcgccgt cgcgcaggcc aagaagcttt ccgatgccgg gcttggccag
     2941 ggcgccctcg gcgagcagga cacgttcacc gctcattgcc gcgacccgag cgaaggcggt
     3001 agcgatgacg gccggatcgc aggtgagagc cgtgaaaacg acattacgcg gtgcgtacgc
     3061 caatgatcga agccgagctc gtaacaaacg cagtgcctct gcttctacgc cgccgggttc
     3121 ttccgtgaca cgcttcacca atgcgcctcg tcccgtgcca ggcaacgtca cgacattcga
     3181 tatatccgcg atcgttgcca acccgtcggc gtcggcaaag ccaaaggtcc tgacgccacg
     3241 aatgaaggcc aacaggcaac ccagaaccgc acccccggcc aatcccatac cgcccgccat
     3301 cttcgtgttc ggcgcagagg gaacatcgga tggcacagcg ccgctgagca atcgcacatc
     3361 cggtatgtta ttggccgcct gcccagtcgg gcccacgacc tgctgcgcct gaatcagcag
     3421 ttgctgcagg acgcgccgct gcgagtccgc gtccgcctgc aactccttga gttgcgcctc
     3481 ggtgttttgc gccttgaccg cggtctcacg agcctgcacg agctgctgct tcacatccgc
     3541 ctcatgggca cgcgcaacct gcaattgggc accaagtgac gagacgatac gccgtgcctg
     3601 gtccgcgatc tgtcctctaa tggccgcaag gtccgaccgt gcgctacgta cgccggga
//
LOCUS       DATAVD010000179         2477 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2994966, whole genome shotgun sequence.
ACCESSION   DATAVD010000179 DATAVD010000000
VERSION     DATAVD010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2994966"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VHX39_03305"
     CDS             <1..298
                     /locus_tag="VHX39_03305"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3990184.1"
                     /translation="RRDLDEWRSVLDGVGVTFGIVGTVNEVLDDQQMRDSGALVPFAD
                     GEHLTVSSPFHIDGVDKVPAQRAPDLGQHSEIVLREAGYAADEIARLRTLGVLT"
     gene            319..657
                     /locus_tag="VHX39_03310"
     CDS             319..657
                     /locus_tag="VHX39_03310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990185.1"
                     /translation="MTAAVALGVAVALQYLRPTSPRGAFVGVIHGLTGALGIGLLIIA
                     LQGPRRGDAMGAGSFGIVAAVLFGLALLFGPFVRVLVRRFPRAAGLVLATHASIALTG
                     FVLFLAWASL"
     gene            complement(697..1740)
                     /locus_tag="VHX39_03315"
     CDS             complement(697..1740)
                     /locus_tag="VHX39_03315"
                     /inference="COORDINATES: protein motif:HMM:NF026220.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YCF48-related protein"
                     /protein_id="HEX3990186.1"
                     /translation="MAKSNFYAGVAGYVGRADQVGLVGVFSRAADAESWTHPVKEHET
                     YAVHVHPTDPNVVFAGTKDGVYRSTDKGKTFQRTNFPGARQIWSFLVDQQNPKLVYAG
                     GSPISIYRSEDTGETWKEMSDPGMPDRAVMPFACRVMRMAQHPTKPGTIYAALEVNGV
                     MRTNNYAESWTDCSADLLRLAEKPNLKSKIVSNTYNEGMLDGHAIAINPADPDGVIFA
                     ARMGLFQTHDGGETWQDMEVGRFSPTTYGRDIKVGADGKTLYAALSVAAASKDGAVYQ
                     STDKGQTWSRYDKVQVHGTIMSVAPHAKNSNVMAIGARYEGEIYATDDGGASWDALPL
                     PAGVKDIYSLAVS"
     gene            1853..>2477
                     /locus_tag="VHX39_03320"
     CDS             1853..>2477
                     /locus_tag="VHX39_03320"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEX3990187.1"
                     /translation="MPNVTAERLTEIEIGLLIAAGASAEEAAIIARYNVGANLVGHDS
                     HGIILIPQYIDRVKAGHIVPGAPWEIQQETATTTVIDGNWGFGYVVNDRAMRYTIEKA
                     KKQNVAVATVRRQSHIGRLASYPLLASAEGMIAMITADSGRSSKAVAPFGGAKARLGT
                     NPICFAIPSNLDGPLVFDMATSAAAAGKINVATARGEQVPAGWLIDAE"
BASE COUNT          427 a          764 c          764 g          522 t
ORIGIN      
        1 caggcgcgat ctggatgaat ggcggtccgt cctggacggt gtcggcgtga cgttcggcat
       61 tgtcggcacc gtcaatgaag ttctggacga tcagcaaatg cgggacagcg gggcgttggt
      121 gccgttcgcg gatggcgaac acctgaccgt ttcatcaccg ttccatatcg atggtgtcga
      181 caaggtgccg gctcagcgag cccccgatct tggccagcac agcgagattg ttttacgcga
      241 agctggctat gccgccgacg aaatcgcgcg tctgcgcact ctcggagtcc tgacatagtc
      301 cgagccgccg gctttgcgtt gacggcagcg gtggcgttgg gtgtggctgt ggcattgcag
      361 tatctgcggc cgacatcccc tcggggcgcg ttcgtcggcg tcattcacgg gctgacgggc
      421 gcactgggta ttggcctgct gataatcgca ctgcagggcc cgcgacgcgg tgacgccatg
      481 ggcgcgggct cctttggtat cgttgcagcg gtgctgtttg gcctggcgtt gctattcggg
      541 ccgttcgttc gcgtgctggt gcgacggttt ccgcgcgcgg cgggcctcgt tctcgcgacc
      601 cacgcctcca tcgcacttac cggttttgtc ctattccttg cctgggcgtc cttatgacgg
      661 gcggcctgtc tggcaggcca cccgtcacat ccaggattac gatacggcca gtgaataaat
      721 atccttcacg ccggccggca acggcagagc atcccagctc gcaccgccgt cgtcggtcgc
      781 gtagatttca ccttcgtaac gcgcgccgat cgccataacg tttgagtttt tcgcatgcgg
      841 cgccaccgac atgatcgtgc cgtgcacctg gactttgtcg taacggctcc aggtctggcc
      901 cttgtcggtg ctttgataga cggcaccatc cttactcgcg gcggcaacgc tcagcgcggc
      961 gtagagggtc ttgccatcgg caccgacctt gatgtcgcgc ccataggtgg tcggcgagaa
     1021 gcggccaacc tccatgtcct gccaggtctc accaccgtca tgcgtctgga acagccccat
     1081 ccgagcagca aaaatcaccc catccgggtc cgccggattg atcgcgatcg cgtgaccgtc
     1141 gagcatgccc tcattatagg tattgctgac gatcttgctt ttcaggttcg gcttttccgc
     1201 gagccgcagc agatcggcgc tgcagtcggt ccagctttcc gcataattgt tggtgcgcat
     1261 gaccccgttc acttcgagcg cagcgtagat ggtgccgggc ttggtcggat gttgcgccat
     1321 ccgcatgaca cggcaggcga acggcattac cgcgcggtcc ggcatgccgg gatcagacat
     1381 ttccttccag gtttccccgg tatcctcact gcgataaatc gaaatcggcg agccaccggc
     1441 ataaaccagc ttcgggttct gttgatcgac caggaacgac cagatttgcc gcgcacccgg
     1501 aaagttggtc cgctggaacg ttttgccctt gtcggtgctg cgatacacgc catccttggt
     1561 gcccgcgaac accacattcg gatcggtcgg gtgcacatgc acggcgtagg tttcgtgttc
     1621 cttgaccgga tgagtccagc tttccgcatc ggcggcacgg ctgaatacgc caaccagtcc
     1681 gacctgatct gctcggccga cataaccggc gacgccggca tagaaatttg acttcgccat
     1741 ggcacgctcc tcttctgaat ttcctactgt catcttatcg ggcctggctc ggcttggcca
     1801 gagcgctccg gatggcgtag cctgaagccg tgcctgcgaa gggagtggaa ccatgccaaa
     1861 cgtcaccgcc gaacgcctga ccgagatcga gatcgggctg ctgattgccg ccggcgcctc
     1921 ggccgaggaa gccgcaatca tcgcccgtta caatgtcggc gccaatctgg tggggcatga
     1981 ttcccacggg atcattctga tcccgcaata cattgaccgg gtcaaagccg gccacatcgt
     2041 ccccggcgca ccgtgggaaa tccagcagga gaccgcgacc acgacagtga tcgacggcaa
     2101 ctggggtttt ggttatgtcg tcaacgaccg ggcgatgcgc tacacgatcg agaaggcaaa
     2161 aaagcagaac gtcgccgtcg ccactgtgcg ccgtcaaagt catatcgggc ggttggcgag
     2221 ttatccgctg ctggcgtcgg cggagggcat gattgcgatg atcactgctg attccggacg
     2281 gtcctcgaag gctgttgcgc cgtttggcgg ggccaaagcg cggcttggca ccaatccgat
     2341 ttgtttcgcg atcccgtcga acctggatgg accattggtg ttcgacatgg cgacctctgc
     2401 cgccgccgcc ggcaagatca atgtcgccac cgcgcgaggc gagcaggtgc cggcaggttg
     2461 gctgatcgac gccgagg
//
LOCUS       DATAVD010000180         3646 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2250997, whole genome shotgun sequence.
ACCESSION   DATAVD010000180 DATAVD010000000
VERSION     DATAVD010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3646
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2250997"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..539
                     /locus_tag="VHX39_03325"
     CDS             <1..539
                     /locus_tag="VHX39_03325"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990188.1"
                     /translation="VSYSTVGYWMPLFLAQQHHWSTTEYGSFYIAWSLFSVTGFWVGG
                     WMIDYFGRRLGFGILLVEAAVVMTIWIFTENTVALWLLGMAWAWGFIGVWGPVTAYTA
                     EMYPTRIRGVGNGFSWSVAFLIGAVLWPYVSVWLRETTGSFVAAFLLIPVILLTMAAI
                     IWFYSPEHARKDLDQIAV"
     gene            complement(587..1543)
                     /locus_tag="VHX39_03330"
     CDS             complement(587..1543)
                     /locus_tag="VHX39_03330"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-alpha-hydroxyglycine alpha-amidating
                     lyase family protein"
                     /protein_id="HEX3990189.1"
                     /translation="MTIIVGDGDYRYEQIDNWAKVPPGWSIHEVGAVGVDKQDNVYVF
                     NRGEHPMMVFDRDGNFLRAWGEGLFPRAHGLHMAPDNTVFLTDDGDHSVRKCTLEGKV
                     LMTLGTPGKPAPFMSGEPFHRCTHTALSPQGDIYVSDGYGNARMHKYAPDGRKLMSWG
                     ESGTAPGQFNLVHNISCDPDGWVYVADRENHRIQVFDGNGRYETQFNNLHRPCGMFMP
                     YCSCPICYVGELGPATRTNRNYPNLGARLSIIDNKGNLLTRIGGQNVGTGIGDYIGPH
                     GLCVDSHGDIYVGEVSRTLWPQYFEGQPPADVRVLRKLRKIS"
     gene            complement(1556..1927)
                     /locus_tag="VHX39_03335"
     CDS             complement(1556..1927)
                     /locus_tag="VHX39_03335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3990190.1"
                     /translation="MKIERIDHLNLTVADIARSVAFYKQVLGMEAESMGEHRAALHFG
                     EQKIHLDAANPARPMGGDKRMPAHICFITKEPVPEVMAHLERCGVPVRMGPGPRVGAV
                     GTIQSIYIDDPDQNSIEISSY"
     gene            2048..3184
                     /locus_tag="VHX39_03340"
     CDS             2048..3184
                     /locus_tag="VHX39_03340"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3990191.1"
                     /translation="MKFSFSAEQAEFRSNLRRFLADRSPTKEVRRLMETDMGWERDDW
                     RRANEALGLTALRIPEAYGGAGFGFSEVGIVLEEMGRALFCAPYFATAVLATGAILNA
                     GTDAQKQALLPDIALGETIATLAAAEDNGRWEGVATTLLATPSASGHRLDGHKSFVLD
                     GHTADTIVVLARAPGSTGENGLSFLTVRGNASGLSRQLLKTMDPTRKLARLTFNGVEA
                     EPLGQPGAAAGPFARTMIEASVCLANEMVGGAERLREDALAYSKLRMQFGRQIASFQS
                     MKHKAADMLLDVELAKSAAYYAAAALDDGDADVAATASLAKACASDAYVQTAVHAIQI
                     HGGIGFTWDNDTHLWFKRAKSSEVLFGDASYHREQMMRHWGAAA"
     gene            3181..>3646
                     /locus_tag="VHX39_03345"
     CDS             3181..>3646
                     /locus_tag="VHX39_03345"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3990192.1"
                     /translation="MSDVTESSVRTEVRAWLEANWNPDLGLIEWRNKLADTGWGAPHW
                     PTAWHGRDLPVGLVPVVEEEFRRIGAVGVAKAGIRVLAAATILAHGTDMQKAKFLRPS
                     LTGEDTWCQLFSEPGSGSDVAGAVTRADLRGNQWVVNGQKVWTTSAHKADWGL"
BASE COUNT          664 a         1075 c         1149 g          758 t
ORIGIN      
        1 tggtgtccta cagcaccgtc ggatactgga tgccgctgtt cctggcgcaa cagcatcact
       61 ggtcgaccac cgagtacggc agcttctaca ttgcctggtc gttgttctct gtcaccggtt
      121 tttgggtcgg cggctggatg atcgattatt tcggacgacg gctgggtttc ggtatcctgc
      181 tggtagaggc ggcggtcgtg atgacgatct ggattttcac cgaaaacaca gtcgctctct
      241 ggctgttggg catggcatgg gcgtggggct tcattggcgt ctgggggccg gtgaccgctt
      301 ataccgcaga aatgtatcca acccggatcc gcggcgtggg caacgggttc tcctggtcgg
      361 ttgcgttcct gattggcgcg gtgctgtggc cgtacgtttc ggtctggcta cgcgaaacga
      421 ccggctcgtt tgtcgccgcc ttcctgctga tcccggtaat cctgttgacg atggccgcga
      481 tcatctggtt ctacagtccg gagcacgcgc gcaaagatct cgaccagatc gcagtctaac
      541 gcgaaagccc agccgcgccg atcgagcgcg actgggcttt gaaacctcaa ctgatcttgc
      601 gcagcttacg taggacgcgg acgtcagccg gaggctggcc ttcgaaatat tgcggccaca
      661 aggtgcggga aacctcaccg acatagatgt cgccatgcga gtcgacgcac agaccgtgcg
      721 ggccgatata atcgccgatc ccggtgccga cgttctgacc gccgatccgt gtcagcagat
      781 tgcctttgtt gtcgatgatc gatagccgcg cgcccaggtt cggatagttg cggttggtcc
      841 gcgttgccgg tcccagttcg ccgacgtaac agatcgggca cgagcagtac ggcatgaaca
      901 tcccgcacgg ccggtgcaga ttgttgaact gtgtctcata gcggccgttg ccgtcgaaca
      961 cctggatgcg atgattttcc cggtctgcga cgtaaaccca gccatccgga tcgcacgata
     1021 tgttgtgcac caggttgaac tggccaggcg ctgtgccgga ctcgccccat gacatcagct
     1081 tgcgtccgtc aggcgcatat ttgtgcatcc gcgcgttgcc atagccgtcc gaaacgtaaa
     1141 tgtcaccctg cggtgacagg gcggtatggg tgcagcgatg gaacggttcg ccgctcatga
     1201 atggcgccgg tttgccgggc gtgccaagtg tcatcagcac tttgccctct aacgtgcatt
     1261 tccgcaccga gtgatcgccg tcgtcggtca gaaacaccgt gttgtcgggc gccatgtgca
     1321 ggccgtgtgc gcgcgggaac aatccctcgc cccatgcacg cagaaaattg ccgtcccgat
     1381 cgaacaccat catcgggtgt tcgccacgat tgaacacata gacattgtct tgcttatcga
     1441 cgcccaccgc gccgacttcg tggattgacc agcctggcgg gaccttagcc cagttgtcga
     1501 tttgttcgta acggtagtcg ccgtcaccga cgatgattgt catggcctat ctccctcaat
     1561 agctggagat ttcaattgag ttctgatcgg ggtcgtcgat gtagatcgat tggatcgtac
     1621 cgacggcgcc gacccgcggg cctggtccca tccgaaccgg cacgccacaa cgttccagat
     1681 gcgccatgac ctcggggacg ggttccttgg tgatgaaaca aatatgcgcg ggcatccgtt
     1741 tgtcgccacc catcggccgt gccgggttgg cagcgtcgag atggatcttc tgctcgccga
     1801 aatgcagggc ggcgcgatgt tcgcccatgc tctcggcctc catgccaagc acctgcttat
     1861 agaatgcaac gctgcgggcg atatcggcga cggtcaggtt caggtggtcg atgcgctcga
     1921 tcttcatgga cttgctccct tgttgcattt tgaagcctgg cacggcgcgg cggatcaggc
     1981 cacctccggt ttgcgcttcc ggcgcctgct tgattggcct tacactgagg accggaggcg
     2041 accacccatg aagttcagtt tttccgccga gcaagccgag ttcagatcca atctccgccg
     2101 tttcctggcg gaccgttcgc caaccaagga agtccgccgg ttgatggaaa ccgacatggg
     2161 ctgggaacgc gatgactggc gccgcgccaa tgaggcgctt ggcctgaccg ctctacggat
     2221 cccggaagcg tacggcggtg cgggatttgg gttttcggaa gtcggcatcg tgctggagga
     2281 aatgggccgt gcgctgttct gtgccccgta tttcgccact gcggtactgg cgaccggcgc
     2341 gattctgaac gccggcaccg atgcgcaaaa gcaagcattg ctgccggaca tcgcattggg
     2401 cgagaccatc gccaccctgg ctgccgcgga agacaatgga cgttgggaag gtgtggccac
     2461 cacactgttg gcgaccccat cggcttccgg ccaccggctg gacggtcata aaagtttcgt
     2521 cctcgatggt cacacggccg atacgatcgt ggtattggcg cgggcacctg gatcgaccgg
     2581 cgaaaatggg ctgtcattcc tcacggtgcg aggcaacgcc tccggccttt cacgccagct
     2641 gttgaaaacc atggatccga cccggaaact ggcacggctg acgttcaatg gcgttgaagc
     2701 tgagccgctt ggccaacctg gtgccgccgc gggcccgttc gcccgcacca tgatcgaggc
     2761 atcggtttgc ctcgccaatg aaatggtcgg cggtgcggag cgattgcgcg aagatgcctt
     2821 ggcgtattcg aagttgcgga tgcagtttgg ccggcagatc gcctcgtttc agtcgatgaa
     2881 gcacaaggcg gccgacatgc tgctcgacgt cgagttggcg aaatccgctg cctattacgc
     2941 ggcggcagcg ttggatgacg gggatgccga cgtggcggcg accgcttcgc tcgccaaggc
     3001 ctgcgccagt gatgcctatg tgcagaccgc cgtccatgcc atccagatcc atggtggcat
     3061 cggcttcacc tgggacaacg acacgcatct ttggttcaag cgcgccaaaa gttccgaggt
     3121 gctatttggc gacgccagtt atcaccgcga acaaatgatg cgccattggg gagcagcggc
     3181 atgagcgacg taacagaatc ctcagtccgc accgaagtgc gagcctggtt ggaggcaaac
     3241 tggaaccccg acctgggttt gattgaatgg cgcaacaaac ttgcggacac cggttggggt
     3301 gcgccgcact ggccgacggc gtggcatggc cgcgatctgc ccgtcggcct cgtgccggtg
     3361 gtcgaggagg agttccgccg catcggtgcc gtcggcgttg ccaaggccgg tatccgagtg
     3421 ctggccgccg caacgatcct ggcgcacggc accgacatgc agaaagccaa atttctgcgg
     3481 cccagtctga cgggtgaaga tacgtggtgt cagttgttca gcgagccagg cagcgggtcc
     3541 gatgtggccg gcgcggtaac ccgggcggac cttcgcggca atcagtgggt ggtcaatggc
     3601 cagaaagtat ggaccacaag cgcgcataaa gccgactggg gtttgc
//
LOCUS       DATAVD010000181         1689 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_763360, whole genome shotgun sequence.
ACCESSION   DATAVD010000181 DATAVD010000000
VERSION     DATAVD010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_763360"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..493
                     /locus_tag="VHX39_03350"
     CDS             <1..493
                     /locus_tag="VHX39_03350"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: protein motif:HMM:NF005314.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HEX3990193.1"
                     /translation="ASSRTRCLRRPMTMRKPKPLNDAALPDVALTDGDHALIAAANAV
                     LEEYYRPFWHMVAAAIRSRDGRIWTGLHIGTTVGRLAVCAEAVAFGRALLEGDGTIQT
                     AVAVRHPKPEEENRELAVVAPCGACREMILDHAPDATIIIKDVDVLIKLPIRTLLPLP
                     YRR"
     gene            complement(551..>1689)
                     /locus_tag="VHX39_03355"
     CDS             complement(551..>1689)
                     /locus_tag="VHX39_03355"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX3990194.1"
                     /translation="TISTPNTQDVDDAAKLLLAASHPMILAGQGVLYAEASAELTELA
                     DLLQAPVMTTVDGKSAFPEDHPLALGSGGNTFNGPGRLYLHTKTDLIFGIGCGFTKHP
                     LTTPALPPNVAIIHATNDPRDLHKSYQTEVALLGDAKLTLASLIAAVKDRLGGKHLNR
                     SPAAELAAEREAWLAHWHAKLNSAETPMTPYRVMSEFMRVVDPAGAIVTHDSGSPRDQ
                     LLPFYRATRPRGYLGWGKSHQLGTGLGLIIGAKVAAPEKFCVNFMGDAAFGMTGLDLE
                     TAVRAGIPSLTIVLNNSTMAIEIPHMKLSHEKHHARDLGGRYADLAKDLGAWSERVAD
                     PGDIANAILRARRATEDGQTALLEFMTSAETAFSHRNGGATSIS"
BASE COUNT          273 a          468 c          598 g          350 t
ORIGIN      
        1 ggcgtcatcg cgaacacgat gcttgcggcg cccgatgaca atgaggaagc cgaagccgct
       61 gaatgatgcg gctctgccgg atgtcgcgct gacggacggc gaccatgcgt tgatcgcggc
      121 ggcgaacgcg gtgctggaag aatactaccg gccgttttgg cacatggtcg cggccgcgat
      181 cagatcgcgc gacgggcgca tttggacagg tctgcacatc ggaacgacgg tcgggcgtct
      241 ggctgtctgc gccgaagccg ttgcctttgg gcgggcgctg ctggagggag acggcacgat
      301 ccaaacggcg gtcgctgtgc ggcatccgaa gccggaggaa gagaatcgcg aactggcggt
      361 tgtcgcacca tgcggtgcgt gccgggagat gatcctggat catgcccccg atgcgacgat
      421 tatcatcaag gacgtggacg tcctgatcaa gctgccgatc cgaacgctgc tgccacttcc
      481 ctatcggcgc tagtatatgt ttttttgcgt ggttcacgcc ttctgacctt cggcttcagg
      541 cgatcacgct ctaactgatt gaggtggcgc caccgttgcg gtgtgagaac gcggtttcgg
      601 cgctggtcat gaattccagc agggcggttt gaccgtcctc ggtcgcccgt ctggcacgaa
      661 ggatggcgtt tgcgatgtcg cctggatcgg cgacccgctc cgaccaggcg cccaggtcct
      721 tggcgagatc ggcgtatctg ccgccgagat cgcgtgcatg gtgtttctcg tgggacagtt
      781 tcatgtgggg aatttcgatc gccatcgtac tgttgttcag cacgatggtc agacttggaa
      841 tgcccgcgcg aaccgctgtt tcgaggtcga ggccggtcat gccaaacgcc gcgtcgccca
      901 tgaagttgac gcagaatttc tcgggtgcgg cgactttggc gccgatgatc aggcccaggc
      961 cggttccgag ctgatgcgat ttgccccagc ccagatagcc gcggggccgg gttgcacggt
     1021 aaaacgggag gagttggtca cgggggctgc cggaatcgtg ggtgacgatc gctccggcgg
     1081 ggtcgaccac gcgcatgaat tcggacatga cccgataggg ggtcatcggg gtttcggcac
     1141 tgttgagctt ggcgtgccaa tgggcgagcc atgcttcccg ctccgccgcg agttccgccg
     1201 ccggggagcg gttgaggtgc ttgccgccca gtcggtcctt aaccgctgcg atcaggcttg
     1261 ccagggtgag cttggcatct cctagcaggg cgacctcggt ctggtatgat ttatggaggt
     1321 cgcgggggtc gttggtcgcg tggatgatcg cgacgtttgg cggcagggcg ggtgttgtca
     1381 ggggatgttt ggtgaagccg cagccgatcc cgaagatcag gtcggttttc gtgtgcagat
     1441 acaggcggcc tgggccgttg aacgtgttgc cgcccgaacc gagggccaac ggatgatcct
     1501 cggggaacgc gcttttcccg tcgaccgtcg tcatgacggg tgcctgcaga aggtccgcga
     1561 gttcggtaag ttcggcggac gcttcggcat ataggacgcc ttgcccggcc aggatcatcg
     1621 ggtgcgatgc cgcgagaagc aatttcgccg cgtcatcgac gtcctgcgtg ttgggcgtcg
     1681 agatggtgg
//
LOCUS       DATAVD010000182         2435 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3368496, whole genome shotgun sequence.
ACCESSION   DATAVD010000182 DATAVD010000000
VERSION     DATAVD010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3368496"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..875
                     /locus_tag="VHX39_03360"
     CDS             <1..875
                     /locus_tag="VHX39_03360"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEX3990195.1"
                     /translation="NPGGSVKDRAGLFIIADAEKRGVLPSGGTIVEGTAGNTGIGLTL
                     VGNARGYRCIIVMPETQSKEKIDFLRMIGADLRLVPAKPYRDPGNYVHVSRRMAEETG
                     GVWANQFDNLANREGHRATTGPEIWQQTEGKVDAFTCACGTGGTLAGVALALKEKHPA
                     VRIVLADCEGSGLYGWVKSNDLSMTGSSITEGIGNSRVTANMDGAPIDDAERIPDAEA
                     LACIYDVLIHEGLSVGTSSGINIAAAIRVAKALGPGHTVVTILADGGARYASKLFNLP
                     FLKEKGLPMPAWMG"
     gene            complement(1085..1876)
                     /locus_tag="VHX39_03365"
     CDS             complement(1085..1876)
                     /locus_tag="VHX39_03365"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX3990196.1"
                     /translation="MPSDPFVEPAGLSSLGAIRYLDARDQAAFDAGHAPGAVRVPVDA
                     WDKAIKGAGSGMGDPGFWRGSLGALGVGPGVTAVTYDTGAMTNAARVWWILQYFGLKC
                     VILNGGWAALSAAASVPAASAPSAGPIQTTAAAGAVGLVNRETLKQRLDGAARVFDSR
                     TRAEFTGEDSRGRSRSGHLPGARHLSHVDLMDHGVVHSAPVLRVMLEGVGFGPGDHIV
                     THCEGGGRAALAAAAAVRAGFDDVHVYYNSFADWARDESCPIVKD"
     gene            2006..>2435
                     /locus_tag="VHX39_03370"
     CDS             2006..>2435
                     /locus_tag="VHX39_03370"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3990197.1"
                     /translation="MANYVLVHGSYQGGWIWQRVAARLRQAGHTVYAPTLEGCAERRH
                     ELRAGIDTTMHGTEIAELLFYEDLHDVVLVGTSSGGMVVCRAAEQMRDRVGRLVLVDA
                     LALFNGERTRDIVNRSAPAPYGLAAGPSREDAEKSLFADLD"
BASE COUNT          466 a          759 c          775 g          435 t
ORIGIN      
        1 tgaaccccgg tggttcagtc aaagaccgcg cgggcctgtt catcattgct gatgccgaga
       61 agcgcggggt gttgccgtcc ggcggaacga tcgttgaagg cacggccggc aataccggca
      121 tcgggttgac gctcgttggc aatgcgcgcg gctatcgttg cattatcgtg atgccggaga
      181 cccagagtaa ggaaaagatc gacttcctgc ggatgatcgg cgccgatttg cggctggtac
      241 cggccaaacc gtatcgcgat cccggcaatt acgtgcatgt ctcccgccgc atggccgagg
      301 aaaccggcgg agtctgggcc aatcagttcg acaatctcgc caatcgcgag ggtcaccgcg
      361 ccaccacggg accggaaatc tggcagcaga ccgagggcaa ggttgatgcc ttcacctgcg
      421 cctgcggcac cggcggcacg ctggcagggg tcgctctggc actgaaagaa aagcacccgg
      481 cggtgcgcat cgtgctggcc gattgcgaag gcagcgggct gtacggttgg gttaaaagta
      541 acgatctcag tatgaccggt tcatcgatca ccgaggggat cggcaacagc cgggtgaccg
      601 ccaacatgga cggcgcaccg atcgatgacg ccgaacgcat tccggatgcc gaggctctgg
      661 cctgcatcta cgacgtgctg atccatgagg gtctgtcggt gggcacgtct tcgggcatca
      721 acattgcggc agcgatacgg gttgccaagg cgctggggcc aggccacacg gtcgtaacga
      781 ttttggcgga tggcggggcg cgctatgcgt cgaaactgtt caatctgccg ttcctgaagg
      841 aaaagggatt gccgatgccg gcgtggatgg ggtgaggcgc gggacgattg cttcgacctc
      901 aagcaatcgt gctggactga ttgcgccaat agtatcggca ccggttcaat atgccaacgg
      961 tccggcctcg ccgctgatta tggttccctc cccatcccgt agcggctgat cccacggcag
     1021 gctgttgccg ggaaggctat ccggttcgcc tgcactgtga aaaatcaaga tttctcccgg
     1081 tccgtcaatc cttcacgatc gggcaacttt catcgcgggc ccaatcggca aagctgttgt
     1141 aatacacatg gacatcgtca aatccggcgc gcactgctgc agctgcggcc aatgccgcgc
     1201 gtccgccgcc ctcgcaatgt gtcacgatat gatcacctgg tccgaagcca acgccctcca
     1261 gcatgacgcg cagcaccggt gccgaatgca cgaccccatg gtccatcaga tctacatgcg
     1321 acagatgcct cgcacctggc agatggccgc tgcgcgaccg gccgcgcgag tcctcgccgg
     1381 taaattccgc gcgcgtgcgg gagtcgaaaa cgcgcgcggc gccatcgagt cgctgcttca
     1441 gggtttcccg attgaccaac ccaacagcac ctgcggccgc ggtcgtctgg atcggtcccg
     1501 cggatggcgc tgacgccgcg ggcaccgaag cggcagcgga aagagccgcc caaccgccat
     1561 tcaggatgac gcatttcaga ccgaaatact gcagaatcca ccaaacccgc gctgcattcg
     1621 tcatcgcgcc ggtatcatac gtcaccgcag tcactcctgg gccgacaccc agcgcaccaa
     1681 gcgatccgcg ccagaagccc gggtcgccca ttccgctacc ggcgcccttg atcgctttat
     1741 cccaggcgtc gacggggact cgcacggcgc cgggcgcatg gccggcgtca aacgctgcct
     1801 ggtcgcgtgc atccaggtag cggatcgcgc ccaaagacga caaaccggcg ggctcgacga
     1861 aaggatcact cggcatggca ggactctcct ctgcgggttt tctgcaggat agcgcggttc
     1921 ggcgcgccgg gatatctggg cttctggatc agtctggcgc gtcattgact gacagcccag
     1981 tatggccggc aaacaggagg cagcgatggc aaactatgta ttggttcacg gctcctatca
     2041 gggcggctgg atctggcagc gcgtggcggc gcgcctgcgc caggcgggtc ataccgtgta
     2101 cgctccaacc ctcgagggct gcgccgagcg gcggcatgag ttacgcgccg gcatcgacac
     2161 cactatgcac ggcaccgaga tcgccgaact gctattctac gaagatttgc atgatgtcgt
     2221 gctcgtcggc accagttcgg gcggcatggt ggtatgccgt gcggcggaac aaatgcgaga
     2281 tcgagtgggc cgcctcgtgt tggtcgatgc gctggcactg ttcaacggcg agcggacgcg
     2341 tgacatcgtc aatcgttccg ctcccgcacc ctatggactg gcggctggcc catcgcggga
     2401 ggatgcggag aagagcctgt tcgccgacct cgatc
//
LOCUS       DATAVD010000183         2585 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1507158, whole genome shotgun sequence.
ACCESSION   DATAVD010000183 DATAVD010000000
VERSION     DATAVD010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2585
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1507158"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1072)
                     /locus_tag="VHX39_03375"
     CDS             complement(<1..1072)
                     /locus_tag="VHX39_03375"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX3990198.1"
                     /translation="MHGVRAFMPPQGLLLIAAYMPARWQVRFVDENIERASRADLDWA
                     DVVLVSGMHIQAPQIREVHRRAKAAGKVMVLGGPSASASPEMYPDIEYIHVGEIGDAT
                     DALIATLDDSVAPPAAQTRFETKERLPLSDFPIPAYGLIPLPRYLMCTLQFSSGCPYQ
                     CEFCDIPGLYGRQPRLKTSEQITAELDAMCKQAGHPPVVYFVDDNFIGNRKAAREMLP
                     HLIAWQKQHGYPMQFACEATLNIAKQTEILRLMREASFLGLFVGIETPEADALTAMRK
                     GHNNSLPMMDAIKTLNSYGLEVTSGIILGLDTDTADTETRLKDFIELSRIPMLTINLL
                     QALPKTPLWDRLNKAGRLTDHAH"
     gene            1394..>2585
                     /locus_tag="VHX39_03380"
     CDS             1394..>2585
                     /locus_tag="VHX39_03380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008946078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX3990199.1"
                     /translation="MNLRNIAIIAHVDHGKTTLVDRLLQQSGSFRENQRVIERALDSN
                     DLERERGITILAKATSLVWHGTRINIVDTPGHADFGGEVERILNMVDGALVLVDAAEG
                     PLPQTKFVVTKALKMGLKPIVVINKVDRSDARPSEVANAVFDLFAALDATEEQLDFPI
                     LYGSAKQGWMAASAEGPKDQGMAPLFDLVVRHVGPPQVEDGPFRMLGTILEANPYLGR
                     IVTGRIFSGSVKPNQNVKVLDHHGSLIEVGRVTKVLAFRGLERTPIDEGFAGDIVAIA
                     GLPEAFVSHTLCAPEVTEPLPAQPIDPPTLTMTFRINDSPLAGTEGDKVQSRVIRERL
                     LREAEGNVTLRISESVEKDSMEVAGRGELQLGILIETMRREGFELSVSRPKVLFQHDD
                     SGELL"
BASE COUNT          491 a          786 c          830 g          478 t
ORIGIN      
        1 cgtgcgcgtg gtcggtgagg cggccagctt tgttgaggcg gtcccacagc ggcgtcttcg
       61 gcagcgcctg cagcagatta atggtcagca tcggaatccg cgacagctcg atgaagtcct
      121 tcagccgcgt ttcggtatcg gcggtgtccg tatcgagtcc gaggatgatg cccgaagtca
      181 cttccaggcc atagctgttg agcgtcttga tcgcgtccat catcggcagc gaattgttgt
      241 ggcccttgcg catcgcggtg agcgcatcgg cctccggcgt ttcaatgccg acgaacaggc
      301 caaggaatga agcctcgcgc atcagccgca gaatttcggt ctgtttggcg atgttgagcg
      361 tggcctcgca ggcgaattgc atgggatagc cgtgctgctt ctgccaggcg atcagatgcg
      421 gcagcatttc gcgcgcggcc ttgcgattgc cgatgaaatt atcgtcgacg aaatacacca
      481 ccggcggatg gcctgcttgc ttgcacatgg catcaagttc ggcggtgatc tgttcggagg
      541 tcttcagccg cggctgacgc ccatacagac cggggatgtc gcaaaactcg cactgatacg
      601 ggcagccgct ggagaattgc agcgtgcaca tcaggtaacg cggcagtgga atgagaccgt
      661 aggccgggat cgggaaatcg ctcagcggca gtcgttcctt ggtttcgaag cgcgtctgcg
      721 ccgccggcgg cgccacgctg tcgtcaagtg tggcaatgag cgcgtcggtg gcgtcgccaa
      781 tttcgccgac gtggatgtac tcgatatccg gatacatttc gggagaggcg gacgccgagg
      841 ggccgcccag caccatgacc ttgccggccg ccttggcgcg gcgatgaacc tctcggattt
      901 gcggcgcctg gatgtgcatg ccgctgacca gcaccacgtc ggcccaatcg agatcggcgc
      961 ggctggcgcg ctcgatgttc tcgtcaacga accggacctg ccagcgcgcc ggcatgtagg
     1021 cggcaattag gagcagcccc tgcggcggca tgaaggcccg cacgccgtgc atcagccggt
     1081 aagcatggga aaaagtgccg aacgacggcg tataggcagg aaaaatgcac aaaacccgcc
     1141 gttggttggt aacggttaat gggcagcgca tgggcgacca cactttcagg atgtgtgccg
     1201 caaatcaagc ctgaacggca catttgacgg ccgatttggc gggcaaatat gaccgcaatt
     1261 tgagcgtcac aaattacctc cgctcgggcg ctgctgcggc gttgcgtccg cgacccggct
     1321 gactatattg cgggcacacg cgcgggcccc tcggggctcg tttttggttt agagccccac
     1381 aaaccttggc aaaatgaacc ttcgcaacat cgccatcatc gcccatgtcg accacggcaa
     1441 gaccacgctg gtcgaccggc tactccagca atcgggctcg ttccgcgaga atcagcgtgt
     1501 gatcgagcgg gcgctcgatt ccaacgacct cgagcgcgag cgcggcatta cgattctggc
     1561 caaggcgacg tcgctggtgt ggcacggcac ccgcatcaac atcgtcgaca cccccggcca
     1621 cgccgatttc ggcggcgagg tggaacgcat cctcaacatg gtggacggtg cccttgtgtt
     1681 ggtcgacgcc gccgaggggc cgctgccgca gaccaaattc gtggtcacca aagcgctcaa
     1741 aatgggatta aagcccattg tggtgatcaa taaggttgac cggtccgacg cgcggccgag
     1801 cgaagtggcc aatgcggtgt tcgacctgtt cgccgcgctc gacgccaccg aggagcagct
     1861 cgatttcccg attctctacg gttcggccaa gcagggctgg atggctgcca gcgccgaggg
     1921 cccgaaggac cagggcatgg cgccgctgtt cgaccttgtc gtccgccacg tcgggccacc
     1981 ccaggttgag gacggcccgt tccggatgct gggtaccatc ctggaggcca acccctatct
     2041 gggccgcatc gtcaccggcc ggatattttc cggcagcgtg aaaccaaatc agaacgtcaa
     2101 ggtgctcgac caccacggca gtctgatcga ggtcggccgc gtcaccaagg tgctggcctt
     2161 ccgcggcctg gagcgcactc ccatcgatga gggattcgcc ggcgacattg tggccatcgc
     2221 gggactgccc gaggctttcg tctcgcacac actgtgcgca cccgaagtga cggaaccact
     2281 gccggcgcag ccgatcgacc cgccgaccct gaccatgacg tttcgcatca acgattcgcc
     2341 gcttgctgga accgaaggcg acaaagtgca gagccgggtg attcgcgaac ggctgctgcg
     2401 cgaggctgaa ggcaacgtca cgctgcgtat ctccgagtcg gtcgagaagg actccatgga
     2461 ggtcgccgga cgcggtgaac tgcagctcgg cattttgatc gagaccatgc ggcgcgaagg
     2521 tttcgagttg tcggtgtcgc ggccgaaagt gctgttccag cacgatgact cgggcgaact
     2581 gctcg
//
LOCUS       DATAVD010000184         1818 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1879417, whole genome shotgun sequence.
ACCESSION   DATAVD010000184 DATAVD010000000
VERSION     DATAVD010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1879417"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            535..>1818
                     /locus_tag="VHX39_03385"
     CDS             535..>1818
                     /locus_tag="VHX39_03385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX3990200.1"
                     /translation="MDFRARRWRFGLLIGTAFVAGAALGPSLGALDSAFAQDSTHTDM
                     YQMLKVFGDVMQRVRADYVDPVNDKDLIENAINGMLTGLDPHSSYMNAKAFKDMQIQT
                     KGEFGGLGIEVNEDKGIIKVVSPIDDTPAAKAGIKPGDIITALDGKTLIGMSLNDAVD
                     KMRGPPNSKIMLTLKRQNVDKPIDVSLIREIIKIQVVKSRMEPHDIGYVRLSQFTEQA
                     DSGIRQAVKALQQQSGGKLRGLVLDLRNNPGGLLDQAVDVSSDFIDQGEIVSTRARHP
                     DDSQRWDAKGSDILHGAPMVVLINGGSASASEIVSGALQDHRRAILLGTRSFGKGSVQ
                     TVIPLPGDGAMRLTTARYYTPSGRSIQALGITPEVHVQETAEAAPTFGGEHESDYNKI
                     LTNQGGTGPDALPPRTDLPPIAKQIPEKPPANFPKF"
BASE COUNT          360 a          558 c          590 g          310 t
ORIGIN      
        1 gcgccctggc tgcggcccag cagttgactg ccgttgccgc cacacgccga gccggcagag
       61 ccagcctgct cggcgtattc aggacaggcc gttaccatcc catcaccgtc acccggtgta
      121 tgggataggg tcgttcggca aacaggtacg tcgtgtggca gatgatgacg agaaggatgg
      181 cgtagcggca tacacattcg atgttggcga aatggggccc ttgccgctcg ctcaccaacg
      241 cctcatgcgc tgagcgccgg ttcggcggca cggtgaggcg acaagcggcg accggactgc
      301 gcgcgagcac aggcgcgccc agcggttacg cgggggtgcg ctggatatcc gtccgggacg
      361 atgcactgct tagcgcacat ccgatcttac aaaatcaaca ctggacggcg gccgcttcgc
      421 cgcgcgacaa caacacgact caaaagtttg ctcgcatcgg atcggcctgt cgggtgtata
      481 ggtgccggtc atgcgctccg gcgttgtccg tgggcgtcga agggaacgga tagcatggat
      541 tttcgcgctc ggcgttggcg cttcggtttg ctgatcggca ccgccttcgt ggccggtgcc
      601 gcgcttggtc ccagcctggg tgcgctcgac agcgctttcg cccaggacag cactcacacg
      661 gacatgtatc agatgctgaa ggttttcggc gacgtgatgc agcgtgtccg cgccgactat
      721 gtggatccgg tcaacgacaa ggacctgatc gagaacgcga tcaacggcat gctgaccgga
      781 ctcgatccgc atagctccta tatgaacgcg aaggcgttca aggacatgca gatccagacc
      841 aagggtgagt tcggcggcct cggcatcgag gtcaatgagg acaagggcat catcaaggtc
      901 gtctcgccga tcgacgacac gcccgccgcc aaggccggta tcaagccggg cgacatcatt
      961 accgcgctgg acggcaagac cctgatcggc atgtcgctga acgacgcggt ggacaagatg
     1021 cgcggtccgc cgaattccaa gatcatgctg acactcaagc ggcagaacgt cgacaagccg
     1081 atcgacgtgt cgctgatccg cgagatcatc aagatccagg tcgtcaaatc gcggatggag
     1141 ccgcatgata tcggctacgt ccggctgtcg cagttcaccg aacaggctga ttccggcatc
     1201 aggcaggcgg tgaaagccct gcagcagcaa agcggcggca agctgcgcgg cctggttctg
     1261 gacctgcgca acaaccccgg cgggctgttg gatcaggccg tggacgtgtc ttccgatttc
     1321 atcgaccagg gggagatcgt atcgacacgg gcacgtcatc ccgatgacag ccagcggtgg
     1381 gacgccaagg gcagcgacat cctgcacggt gcgccgatgg tcgtgctgat caacggcggg
     1441 tcggcgtccg cgtccgagat tgtctcaggc gcgttgcagg accatcggcg ggcgatcctg
     1501 ctgggcaccc gcagcttcgg caaagggtcg gtgcaaaccg tgattccgct gccgggtgac
     1561 ggtgcgatgc gcctgaccac ggcacgctac tacaccccgt ccggccggtc gattcaggcg
     1621 cttggcatca caccggaagt gcatgtgcag gaaaccgccg aggctgcgcc gacattcggt
     1681 ggtgagcatg agtcggacta caacaagata ctgaccaacc agggcggcac cggtccggac
     1741 gcgttgccgc cgcggaccga tctgccgccg atcgccaagc agatccctga aaagccgccg
     1801 gcgaattttc cgaaattc
//
LOCUS       DATAVD010000185         1913 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_203353, whole genome shotgun sequence.
ACCESSION   DATAVD010000185 DATAVD010000000
VERSION     DATAVD010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1913
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203353"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            673..1422
                     /locus_tag="VHX39_03390"
     CDS             673..1422
                     /locus_tag="VHX39_03390"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3990201.1"
                     /translation="MPFYEKGDVRIHYQESGSGFPMLIIPGGGLNSTPAFFTGGSPFN
                     PMEEFKGEYRCITMDLRNAPDGQSTGPLEIDRPWDAHTDDQIGLMDHLGCKEFLVMGF
                     CIGGPFIWNLLKRASGRVPAAVLAQPSGFRPEMPSLSFTNNMKGWGPTLCSRRPNITM
                     AMVEPFLAKMYGDADFVYTVSRDFVRSCQTPVLILPDDVPAHPYAVAMESARLAPNSQ
                     VSLYPWKEPKDLVPLAVRHVRDFLRVNRPAR"
     gene            1621..>1913
                     /locus_tag="VHX39_03395"
     CDS             1621..>1913
                     /locus_tag="VHX39_03395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990202.1"
                     /translation="MLIVDAQVHIWSSGTPMAPHLQVSHYGADELLREMANAGVDAAL
                     IHPPSWDPRSHEIAVEAARAHPDRFAILGYLPPDQVQSHTLISSWKSQPGVLG"
BASE COUNT          375 a          561 c          602 g          375 t
ORIGIN      
        1 acatgcaatg agtggagcgc tttggcgctc gccgccgccg gtctggatat cgacccgtcc
       61 ggcgtcgtcc tggctggtca actcatgagc cgcgcccaga gattgccacc tgatcaatca
      121 gcgacggcgg tgttgccgca ctgagcgtta tctgcagggt ggctgcgtcc cgttactgca
      181 aacaacggac gatccttggg ggaccacaat tgtgcctggt gatgcgggcg tcgacccgcc
      241 gccgctggaa ctgctgcaag cggcaacgcc gatcatgagt aaagcggcga aactcaggcg
      301 cagagtggtc atgacggctc cttcggtccc gaagcaaacg cagttacgcc aggtaagttc
      361 ccgctgtagc aaacaattgt ccgagtggcg gttgggatag cccattgggg ggattgccgg
      421 gatcgaccgg tctcccccgc gccgcctgat ccgtcccatg tcggcgttca ttctcgcctg
      481 aaaatcttac gtttcgatca ttggaacgtg acgcgtcccg gaacgatgca gcggcgaggc
      541 aggcggggag ttgtgagcgc gggtgaacac agataagaag gcggcaacgt ggctgaaacc
      601 gcgaggatca gctcttgcac gctggttgag acacgcaaca gacgtcacca tgcaccgaag
      661 ggagagacca ccatgccatt ctacgaaaaa ggcgatgtcc gcatccacta ccaggagtcc
      721 ggttccggct tccctatgtt gatcatcccg ggcgggggtt tgaactcgac gccggcgttc
      781 ttcaccggag gttcgccgtt caatccgatg gaggaattca aaggcgaata tcgctgcata
      841 acgatggact tgcgcaacgc cccggacggt cagtcgaccg gtccgctgga gatcgaccgg
      901 ccatgggacg cccacaccga cgaccagatt gggctgatgg accatttggg ttgcaaggaa
      961 ttcctggtga tgggcttctg catcggcggt cctttcattt ggaacttgtt aaagcgcgct
     1021 tccgggcgcg tccctgccgc cgtgttggca cagcccagtg gattccggcc ggaaatgccg
     1081 agcctttcgt tcacgaataa tatgaagggt tggggcccga cgctgtgctc tcgccggccg
     1141 aacatcacga tggcgatggt ggaaccgttt ctggcgaaga tgtacgggga tgccgacttc
     1201 gtttacacgg tgtctcgtga tttcgtgcgc agctgccaga cacctgtgct gatattgccg
     1261 gacgatgttc cggcgcaccc gtacgccgtg gcaatggagt cagcgcgcct ggcaccgaat
     1321 tcgcaggtga gcctgtatcc ctggaaggaa ccgaaagacc ttgttccgct ggcggttcga
     1381 catgtgcgtg acttcttgcg ggtcaatcgt cccgcacgct gaaaagtttg cgcgttgcgg
     1441 ctggcgacgc cgggtcgcca gccgtttccg cggctcgcaa atgcgggctt cgaaccggta
     1501 tcgcatcgac cgcaagaggc cggacttctg caaacggaat gtccagaccg accaggcccg
     1561 atttccagat cgggtgctgc tcgcgtagca tcgcccgcag gaaccggagg acgcaacaac
     1621 atgctgatcg tcgacgcgca ggtgcatatc tggtcgagcg gaacgccgat ggcaccgcat
     1681 ttacaggttt cgcactatgg cgcggatgaa ctgctgcgtg aaatggcgaa cgccggcgtg
     1741 gatgcggcgc tgatccatcc gccgagttgg gaccccaggt cgcacgagat cgccgtcgaa
     1801 gcggcgcgcg cacatcccga ccggtttgcc atcctgggat atttgccgcc cgaccaggtg
     1861 caaagtcata cactgatttc cagttggaaa agccaacccg gcgtgctcgg att
//
LOCUS       DATAVD010000186         2868 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_575464, whole genome shotgun sequence.
ACCESSION   DATAVD010000186 DATAVD010000000
VERSION     DATAVD010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2868
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_575464"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..291)
                     /locus_tag="VHX39_03400"
     CDS             complement(<1..291)
                     /locus_tag="VHX39_03400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990203.1"
                     /translation="MTRLRNISLALRLQGMVALLILGFLIAIVDMLHIERDRALDARA
                     TELRTLVQVARGIANSLHAEEIAGKLTHAVALEDFRQSVHAMRYGGDDYIFAY"
     gene            complement(370..1350)
                     /locus_tag="VHX39_03405"
     CDS             complement(370..1350)
                     /locus_tag="VHX39_03405"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX3990204.1"
                     /translation="MRVVLIGVSHWHTPFFLDPCLAMEDVTIVGISDPDLARTDPVAA
                     KAGCKAFADYREMCAAVKPDFAFALARHCDMAELARFLIDQRIPFAMEKPCAINAAEA
                     ADIAARAEAAGVFAAVPYVIRYSPLIETILSLNEPIQYIMFKFIGGMVDRYHQQRVDW
                     VIDRKTSGGGPLLNLGVHFTDLCRVLLPGADLTVTGAMMSNRNAHLTIEDHAVVLMQG
                     GGASCMVETGYLYPAPNSVFDLHYSIRTENHYFAARDDSTLEIITNDRKRSTRPMKLT
                     NVHFYPTFVRDTLQRLKDGRKPIADLTDNAAAVALVEAAYVMSPLRTQSY"
     gene            1424..2335
                     /locus_tag="VHX39_03410"
     CDS             1424..2335
                     /locus_tag="VHX39_03410"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990205.1"
                     /translation="MITLSENFRALFYTPFYAAHATGAYERQGVDVAFRLSSDPNSTA
                     AALRSGEVEVMWGGPLRVMLTHDADPSSDVVCFCDVVARDPFFVIGREPRPAFRPADL
                     TAVRLGIVSEVPTPWLCLQDDIRRDGADPSIVARVTDGTMAENAEALGAGKLDAVQVF
                     QPYAEELLASGTGHLWYAAANRGLTAYTTLVTRRSVLDRKRDELLRMVRAMHQTLRWI
                     RATPGAEIQQVLASYFPDVPAAIFAAAIDRYRALELYGPDPVTRREGFDRLAAAMRSG
                     GALKHDVSFEACVDNSLAEQVIGEGVI"
     gene            2339..>2868
                     /locus_tag="VHX39_03415"
     CDS             2339..>2868
                     /locus_tag="VHX39_03415"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3990206.1"
                     /translation="MEMITAHGLRMPRLGLGTFRMTGARCQAAVESALSLGYRHIDTA
                     QMYGNQDAVGAGWQASGVARADIHLTSKGHHAIQDPDQIRAACAESLRLLRTDYLDLY
                     MLHWPRPGTNLPAALEAMMGLREAGLVRQIGVANCTVAHLRLAMEEVRAPIVCNQIEY
                     HVLIDQTPVLTYMRLNG"
BASE COUNT          523 a          839 c          925 g          581 t
ORIGIN      
        1 ataggcgaat atgtaatcat cgccgccata tcgcatggca tgcacgcttt gccgaaaatc
       61 ctccagcgct accgcatggg ttagctttcc cgcgatttcc tcggcgtgca gactattcgc
      121 gatgccgcgg gcaacctgaa ccagcgtgcg caactcggtc gcgcgggcgt ccagggcacg
      181 gtccctttct atatgcagca tgtcgacgat cgcaatcagg aagcccagga tgagcagggc
      241 gaccatccct tgcagacgca aagcgaggga aatattgcgc aagcgggtca tcgacggtcc
      301 tcgtgttatg acgcaccggc gatcatttag ggcaaagatg aaaaagcggt taacgctggg
      361 tcagcctggt caatatgact gcgttcgtag cggggacatc acataggctg cctccacaag
      421 tgcgaccgcc gcggcgttgt ccgtcagatc ggcgatcggc tttcgtccat ccttcagacg
      481 ttgcagcgtg tcccgcacga aggtcggata gaagtgcacg ttggtcagct tcatcggccg
      541 tgtgctgcgc ttgcgatcgt tggttatgat ctccagcgtg ctgtcatcgc gggcggcgaa
      601 gtaatggttc tccgtgcgga tggagtagtg caggtcgaac accgagtttg gcgcgggata
      661 cagatatccc gtctccacca tgcaactggc tccgccgcct tgcatcagca cgacggcatg
      721 atcctcgatg gtcagatgcg cgttgcggtt ggacatcatc gcgccggtca cggtcaggtc
      781 cgcgcccggc agcaggacgc ggcacagatc ggtgaaatgc acacccaggt tcagcaatgg
      841 gccgccgccg gaggttttgc ggtcgatcac ccaatcgaca cgctgctggt gatagcgatc
      901 gaccatgccg ccgatgaact tgaacatgat gtactggatg ggctcgttca acgacaagat
      961 cgtttcgatc aatgggctgt aacggatcac gtaaggcacc gccgcgaaca ccccggccgc
     1021 ctcggcgcgc gcggcgatgt cggccgcctc cgcggcattg atcgcgcacg gcttttccat
     1081 ggcgaacggg atacgctggt cgatcaggaa ccgggccagt tccgccatgt cgcaatgccg
     1141 agcgagagcg aaggcgaaat cgggtttcac ggcggcgcac atttcccggt agtcggcgaa
     1201 cgctttgcag ccggccttgg cggcgaccgg gtccgttcgc gccaaatcag gatcgctgat
     1261 tccaacgatg gtgacgtcct ccatcgccag gcacgggtcg aggaaaaacg gcgtgtgcca
     1321 atgtgaaacc ccgatcagga ccacgcgcat gatgtttccc ccccttttgt cagatcattc
     1381 cctggcgcat cgtggcggtt cccgcaagcc gaggagaccc gcaatgatca ctctgtcgga
     1441 gaatttccgt gcgctgttct acaccccgtt ctacgcggcg cacgcgaccg gcgcctatga
     1501 gcgtcagggt gtggatgtcg cgttccggct gtcctccgac cccaacagca ctgccgccgc
     1561 gctgcgttcg ggggaggtcg aggtgatgtg gggtggtcct ttgcgggtaa tgctgacgca
     1621 tgatgccgat ccatcctccg acgtcgtctg cttttgtgac gtcgtcgctc gggatccatt
     1681 ttttgtcatt ggccgagagc cccgtccggc cttccggccc gccgatctaa ccgccgtccg
     1741 cctgggcatc gtttccgaag ttccaacgcc ttggttgtgt ttgcaggacg atatacgccg
     1801 cgatggcgct gacccatcga tcgtggcgcg ggtcaccgac gggaccatgg ccgaaaacgc
     1861 cgaagcgttg ggcgcgggaa agctggacgc cgtgcaggtg ttccagccgt atgcggagga
     1921 gttgctggcc tccggtaccg ggcatctttg gtatgcagcg gccaatcgcg gcctgaccgc
     1981 ctatactacg ttggtgacga ggcggtctgt actggatcgg aagcgggacg aattgctacg
     2041 catggtgcgg gcgatgcacc agacgctgcg ctggatcagg gcaacgccgg gtgctgaaat
     2101 ccagcaggtg ctggcaagct attttcccga tgtccccgct gcgatttttg ccgcggcgat
     2161 cgaccgctat cgcgcgctgg aactgtatgg acctgatccg gtgacccgcc gtgaaggctt
     2221 cgatcggctt gccgcggcga tgcggtctgg cggtgcattg aagcatgacg tgtcgtttga
     2281 ggcctgtgtg gacaacagtc ttgccgaaca ggtgatcggc gagggggtaa tatagccaat
     2341 ggaaatgatc acggcgcatg gactgcggat gcctcgcctg gggctgggca catttcgtat
     2401 gacgggcgcg cgatgccagg ccgccgtgga gtcggcgctg tcactgggtt atcgccatat
     2461 cgatacggcc cagatgtatg ggaaccagga tgccgtcggt gccggctggc aggcgtcggg
     2521 cgtcgctagg gccgacatcc acctgaccag caagggtcat catgcgatcc aggatccgga
     2581 ccagatccgc gctgcctgcg ctgagagcct gcgtctgctg cggaccgatt acctggatct
     2641 ctacatgctg cactggccgc gtcccggcac caatcttccc gccgcgctgg aggcgatgat
     2701 gggtttgcga gaggcagggc tggtcagaca gattggtgtg gcgaactgta cggtagcgca
     2761 tcttcgcctg gcgatggagg aggtgcgggc accgatcgtg tgcaaccaga tcgaatatca
     2821 tgtgctgatc gatcagacgc cggtgctgac gtatatgcgt ttgaacgg
//
LOCUS       DATAVD010000187         2935 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1879634, whole genome shotgun sequence.
ACCESSION   DATAVD010000187 DATAVD010000000
VERSION     DATAVD010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2935
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1879634"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1319)
                     /locus_tag="VHX39_03420"
     CDS             complement(<1..1319)
                     /locus_tag="VHX39_03420"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HEX3990207.1"
                     /translation="MMPSFDVLRNWPTEAWAWFDRVVLTPDTLVQFVAAAAAFAAAWF
                     IAKPLSRGLNREVAALPPGPVRLVAQALTNAASPVLLLLFLWFATLAANAAGIRSDLL
                     RLAESLVLVWVLIRLSSRLVRNELLARSIALAAWVVAALNIAGLLGPVVDLLDAMAIP
                     IGNLRLSLLLLLKGFVTLALLIWLANAVSRIIEQRLRHFLPLTPAMQVLAGKLVRMTL
                     LTVAIVAALGSIGIDLTAFAVFSGAIGVGVGFGLQKVVSNLVSGVILLVDRSIKPGDV
                     IEVEGTHGSVSTLNARYVSVLTRDGKEYLIPNEDLITQRVTNWSYSNDLIRLHVKVGI
                     SYGSDPHKAIELTLEATRNVQRVMKTPEPTCLLVGFGDSSVDLELRFWITDPVNGTMN
                     VRSAVMLNIWDLFHTHGIEMPYPQRDLTLRNPEAFAQALAAVRHGTA"
     gene            complement(1467..2324)
                     /locus_tag="VHX39_03425"
     CDS             complement(1467..2324)
                     /locus_tag="VHX39_03425"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HEX3990208.1"
                     /translation="MHWTDRRERYREHVIHGSQCLHPASVFDAISARIAEDLGFEVGM
                     FAGSIGSFSVLGNPDLILLTLTEFAAQAYRINRAGKLPLMVDADHGYGNALNVMRTIQ
                     ELETAGVAGIMIEDTVLPRAFGEKKPTLISLEEGIGKMRAALSAREDKALTIIGRTSA
                     AAVTSPQDALARAKAYEKVGVDAMFFAGGTTHEVIEMLHAELKIPFMLGGGGGDHDKA
                     WLGSMGVRIALQGHQPFSAAVQAVHNTLKALREGTKPAALTGIASAEMMGKVTRSSNY
                     KTWTDDFLG"
     gene            2545..>2935
                     /locus_tag="VHX39_03430"
     CDS             2545..>2935
                     /locus_tag="VHX39_03430"
                     /inference="COORDINATES: protein motif:HMM:TIGR02293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin Xre-like helix-turn-helix
                     domain-containing protein"
                     /protein_id="HEX3990209.1"
                     /translation="MGAIADPVAEVLGIRVSGPLPLMSAVEKGLPLTVLDRVVRSVAP
                     ADNKFAFRIIPRATLARRRRLWASARSGGGGRLSAEEGTRLARLASVWALALEVWGSS
                     EAAREFMFAAHPLLNGRAPVDIVIESEL"
BASE COUNT          548 a          930 c          946 g          511 t
ORIGIN      
        1 tccgccgtgc catgccgcac agcagcaagt gcctgcgcaa acgcctccgg attgcgcaac
       61 gtcaggtccc gttgcggata gggcatctcg atcccgtggg tatggaacag gtcccatatg
      121 ttcagcatca ccgcgctgcg aacgttcatc gtgccattca ccggatcggt gatccagaac
      181 cgcagttcga ggtcgacgga gctatcgccg aaccccacca gcaggcaggt cggttccggc
      241 gtcttcatca cgcgctgaac gttccgggtc gcctcgagcg tcagttcgat cgccttgtgc
      301 ggatccgaac cgtacgagat gcccactttg acatgcagcc ggataagatc attggaatac
      361 gaccagttgg tgacgcgttg cgtgatcagg tcctcgttcg ggatcagata ctccttgcca
      421 tctcgtgtca gcaccgaaac gtagcgcgca ttcaaggtgc tgaccgatcc gtgggtgccc
      481 tcgacctcga tcacgtcgcc gggcttgatc gagcggtcga ccagcaggat cacgccgctg
      541 acaaggttcg acaccacctt ctgcaaaccg aagccgacgc cgacgccgat cgcaccggaa
      601 aacacggcaa acgcggtgag atcgatgccg atggacccga gcgcggcaac aatggccacg
      661 gtcagcaggg tcatccgcac caacttgccg gcgagcacct gcatcgccgg ggtcagcggc
      721 aggaaatgcc gcagccgctg ctcgatgatc cgcgatacgg cgtttgccag ccagatcagc
      781 agggcgaggg tgacgaaccc tttgagcagc agcagcaggc tcaaccgcag gttgccgatg
      841 ggaatcgcca tcgcgtcgag cagatcgacg accggcccga gcagccccgc gatgttcagt
      901 gccgccacca cccaggccgc cagcgcgatc gatcgtgcca gcagttcgtt gcgcaccagt
      961 cgcgaactga gacggatcag gacccagacg aggacaaggc tctcggccag ccgcagcagg
     1021 tccgatcgga tgccggcggc gttcgcagcc aacgtcgcga accacaggaa cagcaacagc
     1081 agcaccggcg aggcggcatt cgtcagcgcc tgcgcgacga ggcggaccgg gcccggcggg
     1141 agggcggcga cctcgcgatt cagaccgcga ctcagcggct ttgcgatgaa ccacgcggcg
     1201 gcgaacgcgg ccgctgccgc gacgaactgc accagcgtgt ccggcgtcag caccacgcgg
     1261 tcaaaccacg cccatgcctc cgtcggccag tttcgcaaga catcgaagga cggcatcatg
     1321 caagttgttt gccgttggaa cggcgccggt gcaatcgacc atgacccgcc ggtcgggcgc
     1381 gattgcccga cacggcaacg tcacggggaa ttgcgcaccc gaaccaggcg gcagaacact
     1441 gtcaccccgc ccggtcggga taaccgttag ccaaggaagt cgtcagtcca ggtcttgtag
     1501 ttactggaac gtgtgacttt ccccatcatt tccgccgatg cgatgccggt cagcgccgcc
     1561 ggtttggtgc cctcgcgcaa cgctttcagc gtgttgtgaa ccgcctgcac ggcggccgag
     1621 aacggctgat ggccctgcaa tgcaatccgc acgcccatgc tgccaagcca ggccttgtca
     1681 tgatcgccgc cgccgccgcc cagcatgaag ggaattttga gctcggcgtg cagcatttcg
     1741 atgacttcgt gggttgtgcc gccggcaaag aacatcgcat cgacgccaac tttttcgtac
     1801 gccttggcac gcgccagcgc gtcctgcggg ctggtgacgg cagcggcact ggtgcggccg
     1861 atgatggtca gcgccttgtc ctcgcgagca ctcaatgccg cgcgcatctt gccgatgcct
     1921 tcctccagcg aaatcagagt gggctttttc tcgccgaacg cgcgcggcag gacggtgtcc
     1981 tcgatcatga tgccggcgac accggcagtt tccagttcct ggatggtgcg catcacgttc
     2041 agtgcgttac cgtaaccatg atcggcatcg accatcagcg gcagcttgcc ggcacggttg
     2101 atccgatacg cctgggcggc gaattcagtc agcgtcaaca agatcagatc cggattgccc
     2161 aatacgctga acgagccgat cgagccggcg aacatgccga cctcaaagcc caggtcctcg
     2221 gcgatgcgtg cggagatggc gtcgaagacg gaggcggggt gcagacattg gctgccgtgg
     2281 atgacgtgtt cacggtagcg ctcgcggcga tcggtccagt gcatggtgtc ctccctggtc
     2341 ggttgggggc aggctagtgg cgttcgggtt gggtgggaag ggctgcgatg gcggaatgga
     2401 gtgggctgag cgacggccgc agctatctgc ctggatcacg tcggaaattg acgcaggccg
     2461 gtgccatgcc gggtccggtt gcctttgctc tcacctgaga ataaattacg tctcatgtga
     2521 taacaggcag aaaagggacg ggccgtgggc gcaatcgcag atccggtggc cgaggtcctt
     2581 ggcattcgag tgtccggccc gctgccgctg atgtcggccg tcgagaaggg attgccgctg
     2641 acggtgctgg atcgggtggt ccgctcggtc gccccggccg acaacaaatt cgcctttcgt
     2701 attatcccgc gtgccacgtt ggcgcggcgc cgcaggctct gggcttccgc cagaagcggt
     2761 ggcggaggcc ggctctcggc cgaggaaggc acccgcctcg cgcgacttgc cagtgtctgg
     2821 gctttggcgc tcgaggtctg gggcagcagc gaagctgcgc gcgaattcat gttcgcagcc
     2881 cacccactgc tgaacggccg cgcaccggtt gatatcgtga ttgaaagcga gcttg
//
LOCUS       DATAVD010000188         2314 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2625260, whole genome shotgun sequence.
ACCESSION   DATAVD010000188 DATAVD010000000
VERSION     DATAVD010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2314
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2625260"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1239
                     /locus_tag="VHX39_03435"
     CDS             <1..1239
                     /locus_tag="VHX39_03435"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX3990210.1"
                     /translation="WRTEGGHHDGERGFGMYGNWLYMETADDYVVSLDATTGKERWHK
                     QIADVKRGYFATNAPLVIGNHVLLGMGGDNLDMQGFLESVDPETGDLQWKWYTTPQKP
                     GDAGYDTWPDDYSRTHGGGMTWQPPTYDPDLNQVYIATGNPNPVGAAQSRKGDDLFTC
                     SVVALNPDTGKMVWYFQSSPHDTHDWDSTQVPVLFDGTWEGKPRKMMVQGTRNGYFFV
                     LDRTNGKNLLTKPLVDPQYVTWSKGIAPNGSPISNPEKDPSIDGVLVGPGSATNWQPP
                     SFSPQTGLFYVGTTEGLALDYLTDTDERPEGYGFSGSGGGAGGRSGIRAIDYHTGVMK
                     WFHAGGGAQGLMSTAGGLLFGGDGTNHFIAFDAATGKPLWHTLVGANPSNGPETFMLD
                     NFQYVLVGAGDTLYAFTLNR"
     gene            1521..>2314
                     /locus_tag="VHX39_03440"
     CDS             1521..>2314
                     /locus_tag="VHX39_03440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990211.1"
                     /translation="MKNSSSSSAVAPAVSSDPSSLPGSGGLAHRYRWDACAIGAVALI
                     CLVRAAFRSLPQRKNTTDLVIALDSAWRVLSGQRPHVDFYSALGPLSSLSTALGLALA
                     HHAADGINYGTALLGFVVGIWTFLIARSRLSPVWAALAAVFCTLLMTTPVGLGDPYSM
                     LSEAMFYDRYGFALLVPILIESYLRPREGSSDFVGGLSTGVSCGLLLFLKASYFFVAA
                     PLIVLLLLVRRQSRKRIAGILLGFGVVVLAVLGYLGFHVGAVISDLR"
BASE COUNT          434 a          717 c          689 g          474 t
ORIGIN      
        1 tggcgaaccg aaggcggcca ccacgatggc gagcgcggct tcggcatgta cggcaactgg
       61 ctttacatgg aaaccgcgga cgactacgtc gtatcgctcg atgccaccac cggcaaggaa
      121 cgctggcaca agcagatcgc cgatgtgaaa cgcggctact tcgcaacaaa tgcgccgctg
      181 gtgatcggta accatgtcct cctcggcatg ggaggcgaca acctggatat gcagggcttc
      241 ctcgaatcgg tcgatcccga aacgggcgat ctccagtgga agtggtacac cacgccgcag
      301 aagccaggcg atgccggcta cgatacgtgg cccgacgatt actcgcgcac gcacggcggc
      361 ggcatgacgt ggcagccgcc aacttacgat cccgatctga atcaggtcta catcgcaacc
      421 ggtaacccga atcccgtagg cgcggcgcag agccgcaagg gcgacgatct cttcacatgt
      481 tccgttgttg cgctcaatcc cgataccggg aaaatggtct ggtatttcca aagctcaccg
      541 cacgacacgc acgactggga cagtacgcag gtgcctgtgc tcttcgatgg cacgtgggaa
      601 ggcaagccgc gcaagatgat ggtgcagggc actcgcaacg ggtatttctt cgttctcgat
      661 cggacgaacg gcaagaacct gctgacgaag ccgctggtgg atccgcaata tgtgacctgg
      721 tcgaaaggga ttgccccgaa cgggagcccg atttccaatc cggaaaaaga tccgtcgatc
      781 gatggcgtac tcgtgggacc gggttccgca accaactggc agccgccgag cttcagcccg
      841 caaaccggac tgttctatgt cggcaccacg gaagggctcg ccctggatta tctgacggat
      901 accgatgagc gacccgaagg ctatggcttc tccggcagcg gaggcggcgc cggcggacga
      961 agcggcattc gcgcgatcga ctatcacacc ggcgtgatga agtggttcca tgcgggtggt
     1021 ggagcgcagg gtctgatgtc aactgcaggc ggactgctgt tcggcggcga cggcacgaat
     1081 catttcatcg ctttcgatgc cgcgaccggc aaaccgctct ggcatacgct cgtaggtgcg
     1141 aacccgagca acggcccgga gacgttcatg ctggataact tccagtacgt tctcgtcggc
     1201 gcgggcgata cactctacgc attcacgctg aacaggtaga ctgcgccagg acgttcctcc
     1261 agatcacaag gccaaggctc gctttaccgg aattcattaa tatacttgcc caccctggtg
     1321 gataatctaa agatgcccac acgctcgaac agggtggaat atccgaacgg gaaactgttg
     1381 tgtctatgag ccggaaggca gatagctcag ccgccctcaa ggacgccggc atcgtgattc
     1441 gccgggccag gcccactggc ctgggcgcag gccgccgctt ggatgaacct ggtctgcatt
     1501 tacgataagg attgcctgga atgaaaaata gctcttcttc cagcgccgtt gcgccggcgg
     1561 tatcttccga tccttcttcg ctgcccggat cggggggact tgcgcaccgg taccgatggg
     1621 atgcctgcgc gatcggcgcg gtagcgctca tttgcctcgt ccgcgctgcc ttccgctcgc
     1681 tgccccagag gaagaacaca actgacctgg taattgcgct cgactccgcc tggcgggttc
     1741 tcagcggcca gcggccgcat gtcgatttct attccgcatt aggcccgctt tcctctctga
     1801 gcaccgcgct tggcctggcg ctcgcgcacc acgccgctga tggcatcaac tatggaaccg
     1861 cgctcctggg tttcgtcgtg gggatctgga ctttcctcat cgcgcgatcg cgcctatcgc
     1921 cggtatgggc ggcgctggcc gcggtgtttt gcactctgct catgacaact cccgttggac
     1981 tcggcgaccc gtactccatg ctcagcgaag ccatgttcta cgaccgctac ggcttcgccc
     2041 tgcttgtccc gatcctcatt gaatcgtatc ttcggccgcg cgagggttct tcggatttcg
     2101 tcggtggatt atcgaccgga gtttcctgcg gcctgctgtt gttcctcaag gcttcctact
     2161 tcttcgttgc cgcgcccctg atcgtcctcc tcctcctggt gcggcgacag agccgcaagc
     2221 gaattgccgg cattctgctc gggttcggcg tcgtcgttct tgcggtcctc ggttacctcg
     2281 gcttccatgt gggcgccgtt ataagcgatc tgcg
//
LOCUS       DATAVD010000189         1600 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_576101, whole genome shotgun sequence.
ACCESSION   DATAVD010000189 DATAVD010000000
VERSION     DATAVD010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_576101"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..332
                     /locus_tag="VHX39_03445"
     CDS             <1..332
                     /locus_tag="VHX39_03445"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX3990212.1"
                     /translation="ELLDAAKIDGAGARQRFFRVILPLLGPTLAFVLIIALLNVLTQV
                     DHVIVMTQGGPSDATMLVLYYIYQQAHQNYDVGLASAATVVSVAFLFAVSMISLRSLE
                     RGIHYET"
     gene            322..1140
                     /locus_tag="VHX39_03450"
     CDS             322..1140
                     /locus_tag="VHX39_03450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020591945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX3990213.1"
                     /translation="MKRSAAWLVLPATAALLWILPFAWMALASIRQGGVGSMDLASLV
                     PAPPFSLGNFADAWQSGNFPLWYGNTVLLCGGILAAQCVTVSLAGYAFARLRFRGRDL
                     LFYAFLLQLMLVPPILIVPNMSTLVALHLYDTLAGVAAPYVASAFGVFLMRQTFRTIP
                     REYEEAAVVDGASRLQIIWHVLLPLARPGLAAFAIVSVTTHWNEFLWPLMATSSPSTQ
                     VLTVGLASFTSGAEAGSEWGVIAAGTFLVAAPLLVLFVLFQRQFVASFTYSGIK"
     gene            1156..>1600
                     /locus_tag="VHX39_03455"
     CDS             1156..>1600
                     /locus_tag="VHX39_03455"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3990214.1"
                     /translation="MRLLSAVAVAMGFAATTVSLPVYAATELDLFFPVPVQGKLAVEM
                     QRLIEKFDTDHPDIHVTAVYTGSYDDTNVKTRAAIEAGKPPGAVIMSANFVREYVIND
                     EVVPFDPMIAQDGETPAKFMEGFWPALRLNAMENGHVYGVPFQNST"
BASE COUNT          252 a          463 c          520 g          365 t
ORIGIN      
        1 acgagttgct cgatgcggcg aaaatcgacg gcgccggcgc acggcaacgt ttcttccgcg
       61 ttatcttgcc attactgggc ccgaccctgg cgttcgtgct gatcatcgcg ctgctgaacg
      121 tgctgaccca ggtggatcac gtcatcgtca tgacccaggg agggccgtcc gacgcaacga
      181 tgctggtgct atattacatt tatcagcagg cgcaccagaa ctacgacgtc ggtctggcct
      241 cggccgcgac ggtggtcagt gtggcgttct tgttcgcagt ttcgatgatc tcgctgcgca
      301 gcctggaacg tggcatccat tatgaaacgt agcgcggcct ggctggtact gccggcgacg
      361 gcggcgttgc tgtggatttt gccgtttgcc tggatggcgt tggccagtat tcgacagggc
      421 ggcgtgggct cgatggacct cgcgtccctg gtcccggcgc cgccgtttag tctgggcaat
      481 ttcgccgatg cctggcaatc gggaaacttt ccgttgtggt atggcaacac ggttctgctg
      541 tgcggcggca tcctggcggc gcaatgcgtg accgtcagcc tggcgggata cgctttcgcc
      601 cgtctgcggt ttcgcggccg agacctgctg ttttacgcct tcctgctgca actgatgctg
      661 gttccgccaa tcctgatcgt ccccaacatg agcacgctgg tggcgctgca cttgtacgac
      721 acgctggccg gggtcgcggc gccctacgtt gcctcggcct tcggcgtgtt cctgatgcgg
      781 caaacgtttc gcaccatacc gcgcgagtat gaggaagccg cagtggtcga tggcgcatcc
      841 cggctgcaga tcatttggca cgtgctgctg ccgctggctc ggcccggact cgcggctttc
      901 gcgattgttt cggtcacgac gcactggaac gagttcctgt ggccgttaat ggcgacatcc
      961 tcaccgtcga cccaggtgct gaccgtgggt cttgcgtcgt ttacgtcggg cgccgaggca
     1021 gggtcggaat ggggcgtcat cgcggccgga acgtttctgg tggcggcacc tctgctggtg
     1081 ttgttcgtgc tgttccagcg ccagttcgtg gcgagtttca cttattcggg aatcaaatag
     1141 gggggagtac cactgatgcg tttgctatct gccgttgctg tggccatggg ctttgcggcg
     1201 accaccgttt cgctgccggt ttatgccgcg accgaactcg acctgttttt cccggtgccg
     1261 gtgcagggca agctggcggt tgagatgcag cgcctgatcg aaaagttcga taccgaccat
     1321 ccggacatcc acgtgaccgc ggtctatacc ggcagctacg acgacaccaa cgtgaagacc
     1381 cgcgctgcga tcgaggccgg caaaccaccg ggggccgtga tcatgagcgc gaatttcgtg
     1441 cgcgaatatg tgatcaacga tgaggtcgtt ccatttgatc cgatgatcgc ccaggatggg
     1501 gagactccgg cgaagtttat ggaggggttc tggccggcat tgcggctgaa tgcgatggag
     1561 aacggtcatg tctacggcgt gccgttccag aattcgacgc
//
LOCUS       DATAVD010000190         1555 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2438815, whole genome shotgun sequence.
ACCESSION   DATAVD010000190 DATAVD010000000
VERSION     DATAVD010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2438815"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..558
                     /locus_tag="VHX39_03460"
     CDS             <1..558
                     /locus_tag="VHX39_03460"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX3990215.1"
                     /translation="RFIDPGALVSNAGANMTSSQPVLTIADTSKLRINIYVEQRDVPF
                     VHVGDLADVSDASHSDRTVQAKIARTAGQLDPRTRTLFAELEVDNKDGFLVPGSFAYV
                     TLHVPIESFPEIPAAALITRGVNTFVADVGDDTVVHMRPVRLARSDGMVVGLRDGVKV
                     GERVALNVPDEIVDGSRVQPMEAAR"
     gene            744..1322
                     /locus_tag="VHX39_03465"
     CDS             744..1322
                     /locus_tag="VHX39_03465"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX3990216.1"
                     /translation="MSAGKGFEQQALPHLDAAYSLAFWLMRDRADAEDVVQDAYVRAL
                     RGFGGFRGDAIRPWLLAIVRNVAWRALAVRRRSTNNVISIEAAFARPGETDSEPLGIA
                     ADEPSAEIRMIEAGDRALLNRALEAVSPLFREVLVLREIEEMSYAEIATVLGVPQGTV
                     MSRLSRARAELRLRYKDVAHEPPPKETGRHVV"
     gene            1312..>1555
                     /locus_tag="VHX39_03470"
     CDS             1312..>1555
                     /locus_tag="VHX39_03470"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX3990217.1"
                     /translation="MLCEEVQDLASAWLDDELSEPRAGAVAEHEARCEACHAYISDLR
                     ILAEQMAQLGREPAPPGLAERIRLSLAAEQGTTEPPG"
BASE COUNT          287 a          474 c          520 g          274 t
ORIGIN      
        1 cgcttcatcg atcctggagc gctggtttcc aacgccgggg cgaacatgac gagttcgcaa
       61 ccggttctga ccatcgcgga cacctcgaag ttgcggatca acatctatgt cgaacagcgc
      121 gacgtaccat tcgtccatgt cggcgacctc gccgatgtgt cggatgccag ccactccgac
      181 cgcaccgtgc aagccaagat cgcacgcaca gcgggccaac tcgatccgcg cacgcgtacg
      241 ctgtttgccg aactggaggt cgataacaaa gacgggttcc tggtgcccgg cagcttcgcc
      301 tacgtcacat tgcacgtccc gatcgagagc ttcccggaga tcccggcggc ggcgctgatc
      361 acccgcggcg tcaacacctt cgtcgccgat gtcggggatg acactgtcgt gcatatgcgg
      421 ccggtgcggc tggcacggtc cgacggcatg gtcgtcggac tgcgcgacgg tgtgaaagtc
      481 ggggagcgtg ttgcgctcaa cgtgccggac gaaatcgtcg acggcagccg ggtgcagcca
      541 atggaggcgg cgaggtagga gtaccagcct ccgtccgcaa tacgcggggc aacgcagtcg
      601 gctgacgttg gcatgcaggt gcttcgctgc gcccgcagta gtgcatttga ccgggcagga
      661 cgccagcaga aaatcggcgg gaataaaacg cgtcgccttg tatctctatc tccataatga
      721 tccggaatac caccgaggca cccttgtcgg caggaaaagg ttttgaacaa caggcgttgc
      781 cgcatctcga cgcggcatat tcgctggcgt tctggctgat gcgcgatcgc gccgacgccg
      841 aggatgtcgt gcaggatgcc tatgttcggg cattgcgggg atttggcgga tttcgcggcg
      901 acgccattcg tccctggctg ctggcgatcg tacgcaacgt ggcctggcgg gcgctcgctg
      961 tgcgccgccg cagcaccaac aacgtgatct cgatcgaagc cgcgttcgcc cgcccaggag
     1021 agactgattc cgagccactc ggcatcgcgg ctgacgaacc ctcggccgaa atcagaatga
     1081 tcgaagccgg cgaccgggcg ttgctgaacc gggcgctgga agcggtgagc ccgctgttcc
     1141 gcgaagtgct ggtgctgcgg gaaatcgagg aaatgtcgta cgccgaaatc gccaccgtcc
     1201 ttggcgttcc tcaggggacc gtgatgtcgc gcctgtcgcg cgcgcgggcg gaattgcggt
     1261 tgcgttacaa ggacgtggct cacgagcccc cgcccaagga gactggcaga catgttgtgt
     1321 gaggaggtcc aggatctggc gagcgcctgg ctggacgacg aactgtccga gcccagggcc
     1381 ggtgcagtgg ccgaacacga ggcgcgctgc gaggcctgcc atgcgtacat ttcagacctg
     1441 cggattttgg cggagcagat ggctcaattg ggacgtgaac cggcaccacc gggtttggca
     1501 gagcggatcc gcctgtcgct tgccgcggag cagggcacta ccgagccgcc cggat
//
LOCUS       DATAVD010000191         2718 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1694378, whole genome shotgun sequence.
ACCESSION   DATAVD010000191 DATAVD010000000
VERSION     DATAVD010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2718
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1694378"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1513)
                     /locus_tag="VHX39_03475"
     CDS             complement(<1..1513)
                     /locus_tag="VHX39_03475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HEX3990218.1"
                     /translation="MTDSPSDNTQSLPETVEALRALVLATFAERDAAVTERDTLLTQN
                     DRLRHLLLKLTRMHFGARSERLPEEQLQLGLEALEQAIAKDEAQAEKQDPELRKENAT
                     KRRASRGALPAHLPRVEVTLTPEDTACPCCRAPMTAIGEDTSERLDVIPAQFRVIVTK
                     RPKFACRACPGTVVQEPAPARLIEGGIPTEAMVAHVLVARYADHLPLYRQAQILERQG
                     VIIERSTLSFWMGYAAAEVAPVVARLREMMLASTRIFADETVVPVLDPGRGRTKQGYF
                     WAIARDDRPWAGDQPPAVVYSYAPGRGHIHATALLGGYHGILQCDGYSAYKKFGGSKS
                     ADPAVTLAFCWSHVRRGFYDLAKAKAPIAIEALKRIAALYAIEADIRGQTATERRIAR
                     QADSKPLIAELRVWFEAQLAKLPARGPTAEAIRYALNHWDGLQRFLDDGRIELDNNSV
                     ERAMRPVWTPGSLCIPSSSIWKHWKLTRGGDVTRAPFTASRLHHGRRVQVGGAD"
     gene            complement(1523..1879)
                     /gene="tnpB"
                     /locus_tag="VHX39_03480"
     CDS             complement(1523..1879)
                     /gene="tnpB"
                     /locus_tag="VHX39_03480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976048.1"
                     /note="TnpB, as the term is used for proteins encoded by
                     IS66 family insertion elements, is considered an accessory
                     protein, since TnpC, encoded by a neighboring gene, is a
                     DDE family transposase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HEX3990219.1"
                     /translation="MINVPAGARILLASRPIDFRKGAHGLAALAQEVLAEDPFSGTVI
                     VYRSKRADRVKILVWDTSGLVLIWKQLQQGSFRWPPIMDGVVKLSPVEFAALFDGIDW
                     TRVQTIKGILKPTVAA"
     gene            complement(2122..2316)
                     /locus_tag="VHX39_03485"
                     /pseudo
     CDS             complement(2122..2316)
                     /locus_tag="VHX39_03485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611734.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            2405..2584
                     /locus_tag="VHX39_03490"
                     /pseudo
     CDS             2405..2584
                     /locus_tag="VHX39_03490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612038.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
BASE COUNT          510 a          926 c          806 g          476 t
ORIGIN      
        1 gatccgcgcc gccgacttgg acacgccgtc cgtggtggag gcggctggcc gtaaagggcg
       61 cccgtgtcac atcgccaccg cgagtcaact tccaatgttt ccagatactt gaagagggga
      121 tgcacaatga cccaggcgtc caaacgggcc tcatggctcg ctcaacactg ttattgtcga
      181 gctcgatgcg cccgtcgtcc agaaatctct gcaacccgtc ccaatggttc agcgcgtaac
      241 ggattgcctc ggcggtcggc ccgcgggcgg gcagtttcgc aagctgcgcc tcgaaccaga
      301 cacgcagttc ggcgatcagc ggcttgctgt cagcctgacg ggcgatccgc cgctcagtgg
      361 cggtctggcc gcggatatcc gcctcgatcg cgtagagtgc ggcaatccgt ttcagtgcct
      421 cgatcgcgat cggcgccttc gccttggcca aatcatagaa gccgcggcgc acgtggctcc
      481 agcagaatgc cagcgtgacg gccggatcgg cagacttgga cccgccgaac ttcttgtagg
      541 ccgagtagcc gtcgcactgc agaatgccgt ggtagccgcc gagcagcgcg gtggcgtgga
      601 tgtgtccgcg cccaggcgcg tagctgtaga ccacggccgg cggctgatcg ccggcccaag
      661 gccgatcgtc gcgcgcaatc gcccagaagt acccctgctt ggtcctaccc cggcccggat
      721 ccagcactgg cacgacggtc tcgtcagcga aaatccgtgt cgaggccagc atcatctctc
      781 gcagccgtgc caccacgggg gcaacctccg ccgccgcgta ccccatccag aacgacaggg
      841 tagagcgctc gatgatcacg ccttgccgct ctaggatctg cgcctggcga tacagaggca
      901 gatggtcggc atagcgggcc accagcacat gcgcgaccat cgcctcggtc gggatgccgc
      961 cttcgatcag ccgcgctggc gctggctcct gcaccacggt gcccggacag gcccggcagg
     1021 caaacttcgg acgcttggtc acgatcaccc gaaactgcgc cgggatcaca tcgagccgct
     1081 cggatgtgtc ctcgccgatc gccgtcatcg gcgcccggca gcatggacag gcggtatcct
     1141 caggcgtcag cgtcacctcg acccgcggca aatgcgccgg cagcgcgcca cggctcgcgc
     1201 gccgcttggt tgcgttctcc ttgcgtagct cggggtcctg cttctccgcc tgcgcctcat
     1261 ctttggcgat cgcctgctcg agcgcttcca gacccagctg tagctgctcc tccggcaggc
     1321 gctccgaccg ggcgccgaaa tgcatccgcg tcagcttcaa cagcagatgg cgcaaccggt
     1381 cattctgcgt cagtaaagtg tcccgctcgg tgaccgccgc gtcgcgttcg gcgaatgtgg
     1441 ccagcaccaa cgcgcgcaag gcctcgacag tctcaggcag gctctgcgta ttgtcggagg
     1501 gcgaatcggt cacgtgcgaa tcctatgctg caacggtcgg cttgagaatc ccctttattg
     1561 tctgaacacg cgtccaatcg atgccgtcaa acagcgcggc aaattcgacc ggtgagagct
     1621 tcacgacgcc gtccatgatt ggcggccagc gaaacgatcc ctgctgcaat tgcttccaga
     1681 tcagtacaag accgctggtg tcccagacca atatcttgac gcggtcggcg cgcttgctgc
     1741 ggtagacaat gaccgtgcct gagaagggat cttcagccaa tacctcctgc gccagtgcgg
     1801 caagtccatg ggcacctttg cggaaatcga ttggccgtga ggccagcagg atccttgccc
     1861 cagcgggaac gttgatcatg tccgcgacgc cgatgcccga atcgcgcgca acaccgcggt
     1921 caactgggcc gcatcgtcca tgccggacgc aacgcgcacc acggcgccgg ccagcttgac
     1981 ctcgatcgca ggcgccgccg atggcggcgt cgcgcgctga accggcgcag ggagcgtgac
     2041 atcggttatg atcggaacga agttgggcga tggggcctgt gccctttttg tcgctacggt
     2101 cgtcacagtc cgacaagcgg cacgtcgcca gccaaatacc tgctgcgaac aaacctgcca
     2161 acgccgagcc acctctgaca cgcgggcacc aggtgccagg gcctcctcga cgatccgcgc
     2221 cttctcctcc gccgaccagc gacgacgacg gacaggtccc gtcagaatct caacccgccg
     2281 gaattcaccc ttcgcgtcat cattaacgtc aaacataacg atagctcgaa gccccctctg
     2341 ccttggggca actcaaccac cgtccggccg gtcattgaag aagggcgtca gagctccgct
     2401 tactgttgaa caggatcatc gagccatcaa acggctcata aaaccgatga tggggttcaa
     2461 atccttccgg tctgccgcgg tgacacttgc cggcatcgaa ctcatgcaca tgatccgcaa
     2521 gggtcagttg ctaccgatgg gcgaggtgcg cccagcgcag caattctgct cgctggcagg
     2581 ataaaccctg ttacctcctt gggtgtcgca tgtccgccta aaaacttgcg acagaaccca
     2641 atactcacgg cagacaccgt cgaacagtga ccgcggcgcg atcgcagacg gaacccgctc
     2701 tgccaccacg cgctcttc
//
LOCUS       DATAVD010000192         1671 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_948827, whole genome shotgun sequence.
ACCESSION   DATAVD010000192 DATAVD010000000
VERSION     DATAVD010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_948827"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..473)
                     /locus_tag="VHX39_03495"
     CDS             complement(<1..473)
                     /locus_tag="VHX39_03495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEX3990220.1"
                     /translation="MTSTISNRVARGREPRDWGLPWLTILALCLGIGTGFGAVLFRDL
                     IGLLHNLFFYGLATVHYDANVFTAPSRWGQFVFLAPVVGALIVTFVVSNFAPEAKGHG
                     VPEVMDAIYYNEGVIRPIVVLVKSLASAVAIGSGSSVGREGPIIQIGSALASTVG"
     gene            832..1230
                     /locus_tag="VHX39_03500"
     CDS             832..1230
                     /locus_tag="VHX39_03500"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX3990221.1"
                     /translation="MALYEGLAGFRLALRRFLAFSEAASRAAGVTPGQYQALLVIKAH
                     PTGAIMIRELADQMFLQHHGAVQLVDRLARAGLVSRRHSKVDRRSVLVGLTPKGGALL
                     RRLATVHRKELLQHEPLLAESLRRLRQIDV"
BASE COUNT          352 a          495 c          499 g          325 t
ORIGIN      
        1 tgcccaacgg tcgatgccaa tgcagaaccg atttgaatga tcgggccttc ccggcccaca
       61 gaggacccgc tgccaatcgc gacggcggat gccaaggact tcaccaaaac cacgatcggg
      121 cgaatcaccc cctcgttata atatatcgcg tccatcacct cgggtacgcc atggcccttt
      181 gcctccggcg cgaaattgga gaccacgaaa gtgacgatca aggcgccgac aactggagcc
      241 aggaacacga actgccccca tcggcttggc gcggtgaaga cgttcgcatc gtagtgaacg
      301 gtggcgagac cgtaaaaaaa caggttgtgc agtagaccaa tcagatcgcg gaacaggacg
      361 gccccgaaac cggtgcctat ccctaaacac agcgcgagga ttgtaagcca cggcaatccc
      421 cagtcgcgcg gttcacgtcc tctcgccacg cggttgctga tggtcgaggt cacggaattc
      481 tttcgtcctc tccgacaaga ccaaacagcg agtcatgaac ccgccgccgg ccggcctcag
      541 ctggcaagac aacaacacgc acacggaact cttgcttcac cggccgttga aacatggtgt
      601 cccaggcgaa tccagggata acatccgata gccatcggct ctctatcata ctatgacata
      661 ttccaatatc ggcggatcga ttgcaagcca cggagcacgc atcggtccag cgacgggctt
      721 gttcgaatgg gcccattgtg gtgtcgcaaa tgctcggata atccggccgc gaatttggaa
      781 ccaacgccga agggaggcac tatgtgccga ggtggcgacg ggcggtctga tttggctttg
      841 tacgagggcc tcgcggggtt ccgcctggcc ttgcggcggt ttcttgcctt cagcgaggcg
      901 gcaagccgcg cggcaggtgt cactcctggg caatatcagg cgctgctcgt cattaaagcg
      961 catcccaccg gcgcgatcat gatccgggaa ctcgccgatc agatgttctt gcagcaccat
     1021 ggagcggtac aactcgtcga ccggctcgca cgggcgggcc tggtctcgcg gcggcactcg
     1081 aaggtcgacc gacggagtgt actggttggt ctcacaccga aaggcggcgc actgctcaga
     1141 cggctggcga cggtgcatcg caaagagttg ctgcagcacg agccgttgct cgctgaatcc
     1201 ctgaggcgtc taagacaaat cgacgtttga gattgtcccg gtagggtgaa gtgcgaaatc
     1261 cgtctcggat gttggatcat tttcctgatc ttctccacct cctcgtgtgt tggccgctgg
     1321 gttgcccgat cgtagctcat gctcgtgcgc gggcccacgc gcttaagcat gccaaggaaa
     1381 tggcgcgcat aaaatcgttt ttgcaccggt tcattcgccg acgtcatcgg ctttggaatt
     1441 tcgcggcgcg ggacagccat acagaccgcg ccccggtgtg atgcaaggac cgcgaaacag
     1501 acggcggggt tgccccgccg cccatcacca gctgaagatg gtcgcgaacg tcagaccctg
     1561 agcgtgaatg tcgttgccga ttggggtggt cgtccggttt gcgccgttgg aatagaagtc
     1621 gaagctgccc tggtgcttct gaatgtagag atactcggcg gcaacgttga t
//
LOCUS       DATAVD010000193         2085 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1694545, whole genome shotgun sequence.
ACCESSION   DATAVD010000193 DATAVD010000000
VERSION     DATAVD010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1694545"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1819)
                     /locus_tag="VHX39_03505"
     CDS             complement(<1..1819)
                     /locus_tag="VHX39_03505"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3990222.1"
                     /translation="MATAAKNGLLPFVAKAAAMTLFQTLRLSHILDRIWPALGLRIRR
                     PILSFWSNATARMSDRWRSRFRGENAPNTEVGADPCRRRDITPESICLPQCDVPVVSV
                     IIPTYGHLSFTLRCLASIQVHFPVTPTEIIVVDDAFSGLEAEALARIQGIRLLRNPVN
                     RGFLRTCNAAAQAARGEFLLFLNNDTEVRGGWLDRLIEVFAHHPDCGLAGSKLIGADG
                     RLQEAGGILWQDASAWNYGWGADPDAPEFNYFRDVDYCSGASLMVRRKVFLSVRGFDE
                     KYAPAYYEDGDLAFRLRGMGLRTYYQPLSEVMHYGGTSHGSDVRFGIRACQVVNQATF
                     RETWQAVLTSDHFPHGTHILRAKDRARDRQVVLIVDRDIPQTHRDAGSCAIIAVIRAL
                     LAAGTVVKFWPFNLQRTPGHTEALQDMGVEVLYAPHHAWLSEWLAMNGADLDIVMLSR
                     PDVAEVCLPLVRSGTAARIVYFGHDIHFRRLMAHAALARNASEWLAAEAMRNLETRIW
                     RDADTVLYLSEEEAADVRSLEPRVDVRSVVPYSFAAGSETSILRDDRPGEPLILLVAG
                     FGHSPNEDAAIWLVREVLPLILTRIPDAQLAIVGSNPSPS"
BASE COUNT          453 a          634 c          617 g          381 t
ORIGIN      
        1 ccgacggcga aggattggaa ccaacgatcg ccagttgagc gtccggtata cgcgtcagaa
       61 tcaatggcag gacctcgcgg acgagccaga tagcggcatc ttcattcggt gaatggccga
      121 agcccgcaac aagaagaata agtggctcgc cgggccggtc gtccctcagg atgctggtct
      181 cggatccggc ggcgaaggaa tagggaacca cggaacgcac gtcgactctg ggctcgaggc
      241 tgcgaacgtc ggcggcttcc tcttccgaca aataaagcac ggtatcggcg tcgcgccaga
      301 tccgggtctc aaggtttcgc atggcttcag cagcaagcca ctcgctggcg ttccgggcca
      361 gagcggcatg cgccatcagg cggcggaaat ggatatcgtg accaaaatag acgatccgcg
      421 ctgcggtgcc cgaccgcacc agcggcaaac aaacctccgc cacgtcgggc cgactcagca
      481 tcacgatgtc gagatctgcg ccattcatcg ccagccactc agagagccag gcatggtgcg
      541 gggcgtacag cacctcgacg cccatgtcct gcagcgcctc ggtatggccc ggcgtccgtt
      601 gcaaattgaa tggccagaac ttcaccaccg ttccggcagc cagcagtgca cgaatgacgg
      661 cgatgatggc gcacgacccg gcatcgcggt gcgtttgggg gatgtcacga tcgacgatca
      721 gcaccacctg gcggtcgcgg gcacggtctt tggcgcgcag gatatgcgtg ccgtgcggaa
      781 aatgatcgct ggtcagcacc gcctgccagg tttcgcgaaa cgtcgcctga ttgaccacct
      841 ggcacgccct gatgccaaag cgaacatcgc tgccatgcga ggtgccgcca taatgcatca
      901 cttccgatag gggctgataa tacgtccgca aacccatgcc gcgcaatcgg aaggccaggt
      961 cgccgtcttc gtagtaagcc ggcgcatatt tctcatcgaa cccgcggacc gagagaaaca
     1021 ccttccgacg taccatcaac gacgcacccg agcagtaatc gacatctcga aaatagttga
     1081 attccggggc atccgggtcg gcaccccaac cataattcca ggccgacgca tcctgccata
     1141 agatccctcc ggcctcttgc aaccggccgt cggcgccgat cagtttggag ccggccagtc
     1201 cgcaatccgg gtggtgtgca aacacctcga tcagccggtc gagccagccg ccacgcactt
     1261 cggtatcgtt gttgagaaac aataagaatt cacctctggc tgcctgcgcg gccgcgttgc
     1321 aggtgcgcag gaaaccgcgg tttaccggat tgcgcagcag acgaatgcct tggattcgcg
     1381 ccaatgcctc tgcttccaac ccggaaaatg catcgtcgac aacgatgatt tcggtcgggg
     1441 tcacagggaa atgcacctgg atcgaggcaa gacagcgcag tgtaaaactc aaatgaccat
     1501 aagtgggaat gatcaccgaa acaaccggca cgtcgcactg tggcagacaa atgctttcgg
     1561 gcgtgatgtc ccgtcggcgg cacgggtctg cgccgacctc ggtgttcgga gcgttctcgc
     1621 cgcggaaccg gctgcgccac cggtcgctca tgcgcgcggt ggcgtttgac caaaacgaca
     1681 atatcggacg gcgtatccgc aagcccagag ccggccatat tcggtcgaga atgtgcgaca
     1741 ggcgcaaggt ttgaaacaat gtcattgcgg ccgctttcgc gacgaacggc agcaacccat
     1801 ttttggctgc ggtggccatg ttgtctcacc aggtgtttgc tcgagatcgc cccctgtgtg
     1861 atgcaaattc gttaggatat ggttaagaaa tcgctgaact cgccgaggtc ccgagccacc
     1921 ggtcggtgtc acgcggcagc aagatcgtta cgatatccaa cgcttgaccg gcttcgttcg
     1981 gccggcttat acgccgtgca atgtgtgtga ggcgcctgct aaaccatgaa tgacgtcaaa
     2041 tgcctacctg tttgatcacc ggcgtcaccg gacaggatgg ttcgt
//
LOCUS       DATAVD010000194         1523 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1134468, whole genome shotgun sequence.
ACCESSION   DATAVD010000194 DATAVD010000000
VERSION     DATAVD010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1134468"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..428
                     /locus_tag="VHX39_03510"
     CDS             <1..428
                     /locus_tag="VHX39_03510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990223.1"
                     /translation="QWLQKRTAELLPAEYFHVAFTVPNEIASVTFYNLADAIEAHGLP
                     SATDPGHPIPISETLCATSSKLSTWRVVDLLDRIRLSPGSAVGSLASARCGLPFAAFS
                     NSWQHFPAVLRCSPSTHFSSPRICNMPFITQQRLSMTSD"
     gene            445..603
                     /locus_tag="VHX39_03515"
     CDS             445..603
                     /locus_tag="VHX39_03515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990224.1"
                     /translation="MNSILLDQRLVPRAAATLPKHGFNAVHVSEIHMQKAQQAAFEGS
                     HRADEDLP"
     gene            complement(959..1171)
                     /locus_tag="VHX39_03520"
     CDS             complement(959..1171)
                     /locus_tag="VHX39_03520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990225.1"
                     /translation="MGRLKENSHESCRLLKYGGPLVFDHVPTPTVARDEILVKVKSTA
                     VNHLDLIEASGSKTDTFDPSAVDTWS"
     gene            complement(1143..>1523)
                     /locus_tag="VHX39_03525"
     CDS             complement(1143..>1523)
                     /locus_tag="VHX39_03525"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA family NAD(P)-binding protein"
                     /protein_id="HEX3990226.1"
                     /translation="WALGQSTKLQMIAVDDIGWFGARAFTDSAALNRREIDLAGDVRT
                     MAEAAEILTKALGRPIAFTQTPIEQVRQYSNDMALMFEWFERVGYSVDIAGLEREFGR
                     ALTKLPEWARRHGRPNGQTQGELA"
BASE COUNT          304 a          499 c          400 g          320 t
ORIGIN      
        1 cccagtggct tcagaagcgt accgccgagt tactcccggc cgaatacttt cacgtggcct
       61 tcaccgtacc gaacgagatc gcttccgtca ctttctataa cttggccgat gcaatcgagg
      121 cccatgggct cccgtctgcc actgatcccg gccatcccat cccgatatca gaaacactgt
      181 gcgctacatc gtctaaactg agcacatggc gggtggttga tttattagat cggattaggt
      241 tgagcccggg aagtgcggtg ggaagccttg catccgcgag atgcggatta ccgttcgccg
      301 cgttctcgaa ctcctggcag catttcccgg ccgtgctgcg ctgctcgccg agtacccatt
      361 tctcgagccc caggatctgc aacatgcctt tcattacgca gcagcggctg tcgatgacga
      421 gcgattgaat attgatcgcg ttgcatgaac agcattctgc tggatcagcg ccttgtgccg
      481 cgtgcggcgg cgactcttcc aaaacacggc ttcaacgccg tgcacgtctc cgaaatccac
      541 atgcagaagg cccagcaggc cgcttttgaa ggaagccatc gcgcagacga agatcttcca
      601 tgatggtggt tttgttctcc tcttagcgct ccaacaattt cgcggacccg acgagctcaa
      661 tgcccaggca cagccacgac aacgaccact ggaaaacgcg aaggccagta atgtctagaa
      721 cacgcgaagc acgatcttgc cgtgcgatcc gcgtctttcc gctcccggtc cactgggcgg
      781 catcccatga accacgcctc atcgttgccg cttgccgtga caatgacggt agcgccggca
      841 cgcgatgcca attgcaccgc ataggcgccc acagccctgc cgcgccgttt gagccgccac
      901 cggcatggcg catgtgccac aacgtcgccg ccaatctgtt cgacgaactc ctgaaaactc
      961 atgaccaggt atctacggca gatggatcga aagtatctgt cttgcttccg gaggcctcaa
     1021 taagatccag atgattgacg gcggtactct tgaccttcac caggatctcg tcgcgtgcga
     1081 ccgtcggcgt cggtacatgg tcgaacacca acggcccacc gtatttcaac aatcgacagc
     1141 tttcatgcga gttctccttg agtctgccca tttggccgcc cgtgcctgcg cgcccactcg
     1201 gggagcttcg tcaatgcccg gccaaactcg cgttccagac cggcgatgtc gacgctgtag
     1261 ccgacgcgtt cgaaccattc gaacatcaac gccatatcgt tgctgtactg ccggacctgt
     1321 tcgattggcg tctgcgtgaa cgcaatcggc cggcccagcg ccttcgtcag gatctccgcc
     1381 gcctccgcca tcgttcgtac gtcaccggcg agatcgatct cgcggcggtt caaggcagcg
     1441 gagtcggtga acgcacgcgc accgaaccat ccaatgtcgt ccaccgcaat catctgtagc
     1501 ttcgtgcttt gcccgagcgc cca
//
LOCUS       DATAVD010000195         2673 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3556266, whole genome shotgun sequence.
ACCESSION   DATAVD010000195 DATAVD010000000
VERSION     DATAVD010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2673
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3556266"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(38..1351)
                     /locus_tag="VHX39_03530"
     CDS             complement(38..1351)
                     /locus_tag="VHX39_03530"
                     /inference="COORDINATES: protein motif:HMM:NF039910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX3990227.1"
                     /translation="MTNAVESLELTRVGPGTPMGNMMRQYWLPALGSSEVTAGGDPVR
                     LMLLGEKLIAFRDASGKVGVMDHRCPHRCASLFYGRNEGDGIACVYHGWKFNTEGACL
                     VQPNLPPEQEFRDKVHAKTYKVREQAGVIWVYMGEREQAPPMPAIEAAMLPDAEVNVT
                     FTQRECNWLQALEGDIDTSHFSWLHVGSVTPDQVQDDNWVKYQVVNRAPGYEVADTDW
                     GTMYCATRPAEEGKTYWRFAHFAFPFWTFIPQGTFVDRVIARAWVPMDDTHVMFFSLQ
                     WKQASGTKPLANGKPIPGATPKPDYQPNSTDWHGRFRPVQRAANDYLIDREAQRNNTI
                     YTGISHIAMQDQAITESMGDIVDHSFEHLAPSDQMITRTRRRLLLAARALRDQGTAPP
                     TVDDPALFQKIRSGERILQADDWQTAYEDGMRAAVRPASYRQAAE"
     gene            1499..1882
                     /gene="hpxZ"
                     /locus_tag="VHX39_03535"
     CDS             1499..1882
                     /gene="hpxZ"
                     /locus_tag="VHX39_03535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxalurate catabolism protein HpxZ"
                     /protein_id="HEX3990228.1"
                     /translation="MQVNLPEVKAEVEAAFARYETALMANDVETLQSLFWNSPHTIRY
                     GIGEILYGWEEIGGFRSARSPIGLARVISRTVITTFGRDFATASTLFHRTTTPGKVGR
                     QQQSWARFDDGWHIVAAHVSVIDGA"
     gene            complement(1884..2447)
                     /locus_tag="VHX39_03540"
     CDS             complement(1884..2447)
                     /locus_tag="VHX39_03540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990229.1"
                     /translation="MPDTPTFGRYAELPVDKMTDAQRAGYRHLIDGPRGRLPGPYKVW
                     VHNPNLVHAASPLGTHFTPGQSALTERQREIAVVVITSKWNSDYPNASHEKRAREVGL
                     PADAVEAIIGGRPTAFADPLEQAVYEVALALANNHIIANGLYEKAVSVLGHERITDMI
                     VLMGYYTAVSLTMNFYAVPAGSPGMAR"
BASE COUNT          498 a          885 c          779 g          511 t
ORIGIN      
        1 gcccgattaa cacggcgccg cgccggaccc caccgttcta ctccgcggcc tgacgatacg
       61 acgccggccg caccgccgcg cgcatcccgt cttcgtaggc cgtctgccaa tcgtccgcct
      121 gcaggatccg ctcgccgctg cggatctttt gaaacagcgc cggatcgtcg accgtgggcg
      181 gagcagtgcc ctgatcgcgc aacgccctcg ccgccagcaa caaccgccgc ctggtccgcg
      241 taatcatctg atcgcttggc gccaaatgtt cgaaactgtg atcgacgatg tcgcccatgc
      301 tttcggtaat cgcctgatcc tgcatcgcga tatgcgagat accagtatag atcgtattgt
      361 tccgttgcgc ttcgcgatcg atgagatagt cgttcgccgc ccgctgcacc ggccggaacc
      421 gcccatgcca atccgtgctg ttcggctggt aatcaggctt tggcgtggcg cccgggatcg
      481 gcttcccgtt cgccaaaggc ttcgtccccg acgcctgctt ccattgcagc gagaaaaaca
      541 tcacatgggt gtcgtccatc ggcacccagg cgcgcgcaat cacgcgatcg acaaacgttc
      601 cctgcgggat gaacgtccag aatggaaaag cgaaatgggc aaaccgccag taggtcttgc
      661 cctcttccgc cggccgcgtg gcgcaataca tcgtgcccca atcggtgtcg gcaacctcat
      721 agcctggcgc gcgattcacc acctggtatt taacccagtt atcgtcctga acctgatcgg
      781 gcgtgacact gccgacatgc agccaactaa agtgcgaggt gtcgatgtca ccttccagag
      841 cctgcaacca gttgcattcc cgctgcgtga acgtaacgtt cacctcggcg tccggcagca
      901 tcgcggcttc gatcgccggc atcggcgggg cctgctcgcg ctcacccatg taaacccaga
      961 tgacgccggc ctgctcgcgc accttgtagg ttttggcgtg caccttgtcg cggaactcct
     1021 gttccggcgg caggttcggc tgcaccaggc aggcgccctc ggtgttgaac ttccagccgt
     1081 gatacacgca tgcgatgccg tcgccctcat tgcggccata gaacaaagag gcacagcgat
     1141 gcgggcaacg gtggtccatg acaccgacct tgccgctggc atcgcggaaa gcgatcagct
     1201 tctcgccaag cagcatcagg cgcacaggat cgccgccggc ggtcacttcg gaggagccca
     1261 gtgccggcag ccaatactgc cgcatcatat tgcccatcgg cgtgccgggt ccgacccgcg
     1321 tcagttcgag gctctcaacc gcgtttgtca tacgtacctc cgagttttcc cttggcggat
     1381 tgtctattgt cagtatgcca ccacgaaagc ggctcgccgt cgagaccatt cccattaaac
     1441 tggccgcgtg gcagaaccgg cgtcccgcaa ccagggacca acccccaggg accaaccgat
     1501 gcaagtcaac ctgcccgagg tcaaagccga ggtcgaagcc gccttcgccc gttatgaaac
     1561 cgccttgatg gcgaacgatg tcgagacgct gcagtcgctg ttctggaaca gcccgcacac
     1621 gatccgctac ggcatcggcg aaatcctgta cggctgggag gaaatcggcg ggttccggtc
     1681 tgcccgctcc ccaatcggcc tggcccgggt catttcgcgc acggttatca ccacctttgg
     1741 gcgggacttc gcgaccgcct ccaccttatt ccaccgcaca accacgcccg gcaaagtcgg
     1801 tcggcagcaa cagtcctggg cgcgctttga cgacggttgg cacatcgtcg cagcgcatgt
     1861 cagcgtgatc gacggcgctt aatctaacgc gccatcccgg gacttcccgc cggcacggca
     1921 taaaaattca tggtcagcga gacggcggta taatacccca tcagcacgat catgtcggtg
     1981 atgcgctcgt ggccgagcac cgaaaccgcc ttctcataca atccgttcgc aatgatatga
     2041 ttgttggcca gagccaatgc cacctcatac accgcctgtt ccaacgggtc ggcgaaggcc
     2101 gtgggccggc cgccgataat cgcctcgacg gcatcggccg gcagcccaac ctccctggcg
     2161 cgcttttcat gtgaggcatt gggatagtcg gagttccatt tgctggtgat caccacaacg
     2221 gcgatctcgc gttgccgctc ggtcaacgcc gactggcccg gcgtgaaatg cgtgccgagc
     2281 ggtgaggccg cgtgcaccag gtttggatta tgcacccaga ctttatacgg gccgggcaac
     2341 cggccgcgcg gaccgtcgat cagatggcgg tatccggccc gttgcgcgtc ggtcattttg
     2401 tcgaccggca gttcggcgta acgaccgaag gttggtgtgt cgggcatggt tttcctcctt
     2461 ggttccggat gcgcctcttc cgtgcgccgg gtggcagcgt tggtcaaccg cgccgaaccg
     2521 tggcacagtc cccccagagc aaagcagtgg aggaaaccat gcaaggcgtc gtgtttcatg
     2581 gggaacgtga actggaaatc atgaatttcc ccgacccgac cccgggaccg ggcgaggtcg
     2641 tggtcgagat gaaagcgtcc ggcatgtgcg gct
//
LOCUS       DATAVD010000196         4431 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1880260, whole genome shotgun sequence.
ACCESSION   DATAVD010000196 DATAVD010000000
VERSION     DATAVD010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4431
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1880260"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..980
                     /locus_tag="VHX39_03545"
     CDS             <1..980
                     /locus_tag="VHX39_03545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="1-phosphofructokinase family hexose kinase"
                     /protein_id="HEX3990230.1"
                     /translation="TDAPRGRGPGDPGDRLSDMTRIVTVTLNPAVDLGCSAELVRPTH
                     KIRTFDEHIDPGGGGINVARVLHALRADVLAVIAAGGVTGALIDELLTEGGVPHLTVR
                     CHGRSRISYTVFDRATKEEYRFVPLGPVAEPHDWTETLSLLDKIQCEWLVASGSLEPG
                     MPSDLYATIARSARARGIRVAVDSSGAALRAALDAGIDLVKPSLTELESYAGRALPDP
                     ADQEAEAMALVRTGRATMVAVTLGEAGAFLASAEGVVRIPAIPVPFQGAVGAGDSFFA
                     GLVWSLSQGHAPKEALGWAIAAGSATVARVGTARVRLEDVMEFHAKLAA"
     gene            complement(983..2023)
                     /locus_tag="VHX39_03550"
     CDS             complement(983..2023)
                     /locus_tag="VHX39_03550"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03617 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEX3990231.1"
                     /translation="MRVSMGLPVHDWSACAKAARQAEEDGVDVITSNELRHDPFTPLA
                     FAALATERVALVPSVAIAFPRSPMIVANHAWDLQRHSKGRFVVGLGSQVKAHNERRFS
                     VPWIAPAARLGEYVESLRAIFRCWEYGEKLNYQGKYYQFSLMTPEFSPGPQQLRLPPI
                     AMAAVGPLMLKTAARVADSVRLHSFATRKYVDEVVRPLLATELAANGKSFEHFEMTGG
                     GFIATGPDEKSVREAAEKVRYRVAFYGSTPAYRGVFDVHGVGDLGIKLNAMSRQGEWN
                     DMARQVPDDVLDLFVARAPYEGLAEAVQQRYGGIVDAVSVDFVAGTPASVRRETIAAL
                     QKIPGQFRGFVA"
     gene            2124..2888
                     /locus_tag="VHX39_03555"
     CDS             2124..2888
                     /locus_tag="VHX39_03555"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3990232.1"
                     /translation="MGSLTGKVIIVTGASRGIGAAASIALAKAGANVMLLARNGALAA
                     DVAQSIIASGGLAGAASCDVSDYAAVEALVSDTESRFGRVDALINNAGVIEPIASIAD
                     SDPAEWARNVQINLVGAFNPIRALLPRMIKAGGGTIVNVSSGAAIRPLEGWSAYCSAK
                     AGLAMLTQAIKVENPANGIRVFGFQPGTTDTDMQVTIRASGINVVSKIPRQNLTPVAH
                     PATAIVYLCTPEADDLNGQEFSLRDDPFRARLKLEG"
     gene            2891..4024
                     /locus_tag="VHX39_03560"
     CDS             2891..4024
                     /locus_tag="VHX39_03560"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3990233.1"
                     /translation="MPGPLDGVRVVELGQALAGPLAGVILADLGADVIKVEKPDGGDD
                     ARLWGPPFVDGDSISFHSNNRAKRSITLDIKNAEDVARLTALVEHADILIQNLRPGIV
                     DACGIGPEAMLAANPRLIYCSIWAFGHQGPLKLAPGFDPLLQCYGAVVSLTGRPDDPP
                     TFCAPAINDTATGMWCVIGALAALKQREATGKGCVVDTSLFESAVAWVQGPLNSFGVT
                     GKLPQRHGAASATLAPYQIFQTADRPICIAAGNDRLFVKLAQSMGCPEWVDDPRFCDG
                     RKRAANREALAAVMQPVLLGRTRRDWLGIIGEAGVPVAPVNDIADLAQSEQLQAMDMM
                     RTLPGSDLRVVGLPVSFDGKRPHPLADSPKLGEHNTEIFGDPV"
     gene            4021..>4431
                     /locus_tag="VHX39_03565"
     CDS             4021..>4431
                     /locus_tag="VHX39_03565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX3990234.1"
                     /translation="MSQTALERARSYQQELTGIRHDIHAHPELGLEEVRTADLVAKKL
                     EEWGIEVHRGVGVTGVVGVLRNGNGQASVGLRADMDALPILEASDLPYASQNPGRMHA
                     CGHDGHTTMLLGAAKYLAETRNFNGTVNFIFQPAE"
BASE COUNT          826 a         1393 c         1408 g          804 t
ORIGIN      
        1 gtacggacgc cccgaggggt cgaggtcctg gagatcctgg cgatcgacta tccgacatga
       61 cccggatcgt cacggtgacg ttaaaccccg cggtcgatct cggctgttcg gctgaactcg
      121 tccgtcccac tcataaaatc cgcaccttcg acgaacatat cgatcccggt ggcggcggca
      181 tcaacgtggc tcgcgtattg cacgcattac gggcggacgt cctggccgtg attgcggcag
      241 gcggcgtgac cggcgcgctg atcgatgagc tgctgaccga aggcggcgtg ccgcatctca
      301 cagtgcgttg ccacggccgt tcgcggatca gttacacggt attcgatcgc gccacaaagg
      361 aagagtatcg gtttgtaccg ctcggcccgg tcgccgagcc gcacgactgg accgaaaccc
      421 tgtccctgct tgataaaatc caatgcgagt ggctggttgc cagtggcagt ctggaacctg
      481 gcatgccgtc cgacctctat gccacgatcg ctcgatcggc ccgcgcgcgg ggcattcggg
      541 tcgccgtcga ttcgtccggt gcggcactac gagccgcact cgatgccggt atcgacctgg
      601 ttaaacccag cctgacggaa ctggaatcct atgccggccg agcgttgccc gatccggcag
      661 accaggaggc cgaagcgatg gctctggtcc gcaccgggcg cgcgacaatg gtggccgtca
      721 ctcttgggga agcgggcgca ttccttgcct cggccgaagg cgtggttcgg ataccggcca
      781 ttccggtccc gttccaaggt gcggttggcg ccggtgacag tttcttcgca ggcctggtgt
      841 ggtctttgtc acaagggcac gcgccgaagg aagccctcgg ttgggccatc gccgccggca
      901 gtgcgacagt ggcgcgcgtt ggtaccgcgc gcgtgcggct tgaggatgtg atggaatttc
      961 acgccaaact ggccgcctga ggtcaggcaa caaaacccct gaactggccg ggaatcttct
     1021 gcaacgccgc aattgtctcg cggcgtaccg atgccggcgt gccggcgacg aaatcgaccg
     1081 aaacggcatc gacaatgccg ccgtagcgct gttgcacggc ctcggcgagg ccctcatacg
     1141 gcgcacgggc gacaaacaga tccaacacgt cgtcgggcac ctggcgtgcc atgtcgttcc
     1201 actccccttg ccgcgacatg gcattcagtt tgatgcccag atcgccgacg ccatgcacgt
     1261 cgaagacgcc acgataggca ggcgtcgagc catagaatgc cacacggtaa cgcactttct
     1321 cggccgcttc gcgcacgctt ttctcatcgg gaccggtggc gatgaagccg ccgccggtca
     1381 tttcgaaatg ctcgaacgac ttgccgttgg cagccagttc ggtggcaagc aacggccgca
     1441 ccacctcatc gacatatttc cgggttgcga aactgtgcag ccggacactg tcggcaacgc
     1501 gagccgcggt cttcagcatc aacggtccga ccgcggccat cgcaatcggc ggcaaccgca
     1561 attgctgcgg tccgggcgag aattccggcg tcatcaatga aaactgatag tatttacctt
     1621 ggtagttcaa cttctcacca tactcccagc aacggaatat ggcgcgcaga gactcgacat
     1681 attcgccaag ccgggcagcg ggtgcgatcc acggcacact gaagcggcgc tcgttgtgtg
     1741 ccttgacctg cgagcccagt ccgacaacga aacgaccttt cgagtggcgt tgtaaatccc
     1801 aggcgtggtt ggcaacgatc atcggactgc gcggaaaggc aatggcgacc gacggcacca
     1861 gagcaacccg ctcggtcgcc aaagcagcaa acgccagcgg cgtgaaagga tcgtgccgca
     1921 gttcattgct ggtgatcacg tcaacgccgt cttcctccgc ctggcgggcg gccttggcgc
     1981 aggcagacca atcgtgcacc ggcagtccca tcgatacgcg cattgtcgct ctccccgttt
     2041 gccgcctggc tcgcggtctc gtaaacctgg gttggccaga ggagtcaaac tgcgaggagt
     2101 caaactgcat ggagtcaaac tgcatgggca gcctgacagg caaagtcatc atcgtcaccg
     2161 gagcgagccg cggcatcggc gccgctgcct ccatcgcatt ggccaaagcc ggagcgaacg
     2221 tgatgctgct cgccaggaac ggcgctctgg ccgcggatgt cgcgcaaagc atcatcgcgt
     2281 cgggcggcct tgccggcgcc gcgtcctgcg acgtgtcgga ttacgccgct gtcgaggcct
     2341 tggtgtccga caccgaaagc cgtttcggcc gggtcgacgc gctgatcaac aacgccggcg
     2401 tgatcgagcc gatcgccagc atcgccgaca gcgaccctgc cgagtgggcg cgcaacgttc
     2461 agatcaatct ggttggtgcg ttcaatccga tccgcgcact gctgcctcgc atgatcaagg
     2521 ccggcggagg caccatcgtc aacgtgtcct ccggcgcggc gatccggcca ctggagggat
     2581 ggagtgcata ttgctcggcc aaggccggcc tcgcgatgct gacgcaggca atcaaggtcg
     2641 aaaatcccgc gaacggcatt cgggttttcg gtttccagcc aggcacgacc gacaccgaca
     2701 tgcaggtgac gatccgggcg tccggcatca atgtggtcag caaaattcca cggcagaatt
     2761 tgactccggt cgcgcatccc gccacggcca tcgtctatct gtgcacgccg gaagccgacg
     2821 atctgaatgg ccaggaattc agtttgcgcg atgacccgtt tcgcgcccgt ctgaagttgg
     2881 aaggttgacg atgccaggcc cattggacgg cgtgcgagtg gtcgaacttg gtcaggctct
     2941 ggcgggaccg ttggccggag tcatcctggc cgatctcggc gccgacgtga tcaaggtgga
     3001 aaaacccgac ggcggcgatg atgcgcggct ctggggcccg cccttcgtcg acggcgactc
     3061 gatcagtttc cacagcaaca atcgcgcgaa acgttcgatc acgttggaca tcaagaatgc
     3121 cgaggacgtg gcgcggctga cggctctcgt ggaacacgct gacatcctga ttcagaacct
     3181 gcggccgggg atcgtcgatg cctgcgggat cggaccggag gcaatgttgg cggccaatcc
     3241 tcggctgatc tattgctcga tctgggcttt tgggcaccag gggccgttga aactggcgcc
     3301 cgggttcgat ccgttgttgc aatgctatgg cgcggtggtg tcgctgaccg gacggcccga
     3361 cgatccgcca accttctgtg cgccggcgat caatgacacg gcgaccggca tgtggtgcgt
     3421 aatcggcgcg ctcgccgcat tgaagcagcg cgaggccacc ggcaaaggtt gcgtggtcga
     3481 tacgtcgctg tttgagagtg cggtggcctg ggtgcaaggt ccgctgaaca gctttggcgt
     3541 caccggcaaa ctgccgcaac ggcatggcgc ggccagtgcg acgttggccc cctatcaaat
     3601 tttccagacc gctgaccggc caatttgcat cgccgccggc aacgaccggc tgtttgtgaa
     3661 gctggcgcaa tcgatggggt gcccggagtg ggtggacgat cctcggtttt gcgatggccg
     3721 taagcgggcc gccaatcgtg aggcgctggc ggccgtcatg cagccggtgc ttctgggccg
     3781 cacccgccgc gactggttgg gcatcattgg tgaggccggc gtgccggtcg ctccggtcaa
     3841 cgacatcgcc gacctcgccc aatccgagca gttgcaggca atggacatga tgcgcacact
     3901 gcctggcagc gatctgcgcg ttgtcggcct gcccgtctca ttcgacggaa agcgcccgca
     3961 tccgcttgcc gattcgccca aacttggtga acacaacaca gaaatattcg gagacccggt
     4021 atgagccaaa ctgccctcga gcgtgcccgt tcctatcagc aggaactgac cggcattcgc
     4081 cacgacatcc acgcccatcc cgagcttggg ttggaagaag tccgcacagc cgatctggtg
     4141 gcgaagaagc tggaagagtg gggcatcgaa gtgcaccgcg gcgtcggtgt caccggcgtc
     4201 gtcggggtgt tgcgcaatgg caatggccag gcctcggtcg ggttgcgggc cgacatggat
     4261 gccctgccga tcctggaggc aagcgacctg ccttacgcca gccagaaccc cggccggatg
     4321 cacgcctgcg gtcacgacgg ccataccacc atgcttctgg gcgcggcaaa gtacctggcg
     4381 gagacacgta atttcaacgg caccgtgaat ttcatcttcc aaccggccga g
//
LOCUS       DATAVD010000197         1519 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1134636, whole genome shotgun sequence.
ACCESSION   DATAVD010000197 DATAVD010000000
VERSION     DATAVD010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1134636"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..277)
                     /locus_tag="VHX39_03570"
     CDS             complement(<1..277)
                     /locus_tag="VHX39_03570"
                     /inference="COORDINATES: protein motif:HMM:NF013722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HEX3990235.1"
                     /translation="MLTVDKPADMKAHVGEDMGASNWLTVDQAMVDKFADATGDHQWI
                     HVDVDRAKREMPGGKTIAHGFLTLSLLAGLAHQTHEIRQRSRGINYGS"
     gene            409..1191
                     /locus_tag="VHX39_03575"
     CDS             409..1191
                     /locus_tag="VHX39_03575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990236.1"
                     /translation="MSQSRLSQRQAAFRADFRTRIAPAYHGWVHVALIAALGLAAIWF
                     CAMRIHDPAWYEFLVIPFAFGVSNVFEWWIHRYIMHRPVKGFMGIYKRHTLAHHQFFT
                     NVEPTFDNSRDFRIVFFPPYALVAFMALSIPPAAVLGLVGLPNAGWLLLITNVALYLN
                     YELFHFCCHVKDDRLVRYIPLINSIRRHHIAHHNTAIMMERNFNLTYPVADWFFGTSD
                     LDCGLLKHVFNGYDNSRVRRDLKRVRNTTDDVRAGHVSVAAE"
     gene            1188..1379
                     /locus_tag="VHX39_03580"
     CDS             1188..1379
                     /locus_tag="VHX39_03580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990237.1"
                     /translation="MSQSRSPIKTGRASLIGGIAVGVASFILWTLITHELGIDTPALL
                     FCGLLVAAAVGLWIRVADL"
BASE COUNT          256 a          474 c          448 g          341 t
ORIGIN      
        1 cggagccata attgatcccg cgcgaacgtt gcctgatctc atgcgtctga tgcgcgaggc
       61 cagccagcag cgacagcgtc aggaacccgt gcgcgatggt tttgccaccg ggcatctcgc
      121 gctttgcccg atcgacatcg acatggatcc attggtgatc gccggtcgca tcggcaaatt
      181 tgtcgaccat cgcctgatcg accgtcaacc agttgctggc ccccatatcc tcgcccacgt
      241 gcgccttcat gtcggccggc ttgtctactg tcagcatggt ccgctccttt gctggtcgct
      301 gcagcgactc tagcgcgggc cgcggcgcga ttcgaggcct ttgccgccac ggccgggacg
      361 gcgtatcgtt aattcgccgg aggataccgc cccaaaggac ccaccctgat gagccaatcc
      421 cgtctgtccc aacgtcaggc cgcgtttcgt gccgacttcc gcacccggat tgcgcccgcc
      481 taccacggtt gggtgcatgt tgcgctgatt gctgcgctcg ggctggcggc gatctggttt
      541 tgcgccatgc ggatccacga cccggcctgg tacgaattcc tggtcattcc gttcgcgttc
      601 ggcgtgtcga acgtgttcga gtggtggatc caccgctata tcatgcaccg gccggtgaag
      661 gggttcatgg ggatctacaa gcgccacaca ctggcgcacc atcagttctt caccaacgtc
      721 gaaccgacgt tcgacaattc gcgcgatttc cgcatcgtgt tttttccgcc ctacgcgctg
      781 gttgcgttca tggcgttgtc gatcccgccc gccgccgtac tgggcctggt gggattgccg
      841 aatgccgggt ggctgctgct gatcaccaac gtggcgctgt atttgaacta cgaactgttc
      901 catttctgct gccatgtgaa ggatgaccgg ctggtgcgat atattccgct gatcaactcg
      961 atccgccggc atcacatcgc gcatcacaac acggcaatca tgatggagcg gaatttcaac
     1021 ctcacctatc cggtcgccga ttggttcttt ggcacctccg atctcgactg cgggctgctg
     1081 aagcatgtgt tcaacgggta cgacaattcg cgggtccggc gcgatctgaa acgggtacgc
     1141 aacacgacgg atgacgtgcg ggccggtcat gtttcggtgg ccgccgaatg agccagtcgc
     1201 gttccccgat caaaaccggg agggccagcc tgatcggcgg gattgccgtc ggtgtcgcca
     1261 gcttcatcct ttggacgctg atcacgcatg aactcggcat cgatacgccg gcgttgctgt
     1321 tctgcggact gctggtagcg gcggcggtcg gtctttggat cagagtggcc gatctttagg
     1381 gcagcggcac ccgcattccc tgttgaccct tgtcatatcc gggctgatca tccggtatcg
     1441 tgccgaaaag gagccgttta ccatgccgtt ggaatcgatc gaaaccgccg aacttaacct
     1501 gtcggatacg cgctggcag
//
LOCUS       DATAVD010000198         2088 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2625921, whole genome shotgun sequence.
ACCESSION   DATAVD010000198 DATAVD010000000
VERSION     DATAVD010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2625921"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..894
                     /locus_tag="VHX39_03585"
     CDS             <1..894
                     /locus_tag="VHX39_03585"
                     /inference="COORDINATES: protein motif:HMM:NF028178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEX3990238.1"
                     /translation="KGSLQNLSDILYLRGIDIGFCQADALAYAKQHNMFPGLTQNIRY
                     IAKLYDEEVHVLARKDINQLSDLNGQRVNVDVAGSGSAMTAEILLDALGINAKVEHDK
                     QVNGVQKLKSGEIAAIIHVGGAPIPLFADVTADSGLHFLTVPLNPALAQTYLPDKFTH
                     DMYPALVPADAPVPTIAVGDVLAVFAWPPHTDRANNVNRFVNDFFSRFEEFQKPPRHP
                     KWREVNLTAEVPGWTRLREAQDWLDKQNSARTASPATQVRFNAFLTQNHPGMNSKLSD
                     ADREKLFQQFVAWDRQQSAAR"
     gene            1134..>2088
                     /locus_tag="VHX39_03590"
     CDS             1134..>2088
                     /locus_tag="VHX39_03590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990239.1"
                     /translation="MLCAGYLLTGNACSAAGDPSGSTPAAAIADRATEALLHRIVQQI
                     VGGRIISPPDDNAMQSWQLVLQRDIATHRSPEVLKALEDFDTFARARAADEKTAGHVL
                     VGAELIVFADQASHMMGRTPPIDLSGPAASAPDAAIGGTPPVRSDGGTSASTADATPS
                     ITDAVVQAAPRQQALGTTVVAKEVAGSDGRPVGPAGKAGSDPKGLDGAHQAADTASSS
                     ASGEPPKAASTDIVQAVQIASNGDVRPASPPAGPTSAATPVAFGDAPEAQSIRTPDGA
                     SGAALRSDVPFDKLSGQLRAQPAASAEAGPSGAAVTSTLAAA"
BASE COUNT          385 a          660 c          663 g          380 t
ORIGIN      
        1 aaggggtcgc tgcaaaatct gtccgacatt ctctacctca ggggcatcga cattggattc
       61 tgccaggccg acgcattggc ctacgcgaaa cagcacaaca tgttccctgg gctgacgcag
      121 aacatccgct acatcgccaa gttgtacgat gaagaggtgc atgtcctggc ccgcaaggac
      181 atcaaccaac tttccgatct gaacggccag cgcgtcaatg tcgacgtcgc cggcagcggt
      241 tccgcgatga ccgccgagat cctgctcgac gcgttgggca tcaacgccaa ggtcgagcac
      301 gacaagcagg tcaatggcgt ccagaaactg aagtccgggg agattgccgc gatcatccat
      361 gtcggaggcg cgccaattcc cttgttcgcc gacgtgaccg ccgatagcgg tctgcatttc
      421 ctgaccgtgc cgctgaatcc ggcgctggct cagacctacc tgccggacaa gtttacccac
      481 gacatgtatc ccgcgctggt cccggccgat gcgccggtgc caacgattgc ggtgggcgat
      541 gtgctggccg tgttcgcctg gccgccgcac accgaccgtg ccaacaatgt caaccgtttt
      601 gtgaacgatt tcttcagtcg gtttgaggag ttccagaaac cgccgcgtca tccgaagtgg
      661 cgcgaagtaa acctgaccgc cgaagtgccc ggctggacgc gcctgcgcga ggcgcaggac
      721 tggctggaca aacagaactc ggcccggacc gccagtccgg caacccaggt gcggttcaat
      781 gcattcctga cgcagaatca cccgggcatg aacagcaagc tgagcgacgc tgaccgggag
      841 aagttgtttc agcagtttgt cgcctgggat cggcagcagt cagcggcgcg ctgagcgtgc
      901 ctcgggtgcg ttcaatgtgg tcgcggtggc cacgggattg gaaccttggt ccgtggcggc
      961 ggaccgcggc gcagacccgc tggcactcaa tgtgtgttgc gttggggcag ttcatcgccg
     1021 acgatcgttg cccgccacgg cacatctgcg ccgatttgaa caagccgccg ttgccgcact
     1081 cagggtaccg tcttccgttc cgcttacctg ctccggtggg gcagattttg ctgatgcttt
     1141 gtgcgggtta tttgctgaca gggaatgctt gctccgcggc cggtgatccg tccggctcga
     1201 cgcctgccgc ggcgattgcg gatcgcgcga ccgaggcgct gttgcacaga attgtgcagc
     1261 agattgttgg cgggcgcatt atctctcccc ctgacgataa cgccatgcaa agctggcagc
     1321 ttgtgttgca acgggacatt gcaacacacc gctcgcccga ggtgctgaag gcgctggagg
     1381 atttcgacac ttttgcaagg gcacgcgcgg ccgacgagaa aaccgccgga catgtactgg
     1441 tgggcgccga attgatcgtg tttgccgatc aggcgagcca tatgatgggg cgcactccac
     1501 ccattgacct gtccggcccg gctgcttcgg cacccgatgc cgcaatcggc ggtacgccgc
     1561 ccgttcggtc ggatggcgga acttctgcgt cgacggctga tgccaccccc tcgataaccg
     1621 acgcagtcgt tcaggccgca ccgcgccagc aagcattggg caccacggtc gttgctaaag
     1681 aagtcgcggg cagcgacggg cggcccgtcg gaccggcagg taaggcagga tcggatccaa
     1741 agggcctcga tggagcccac caggcggcgg acaccgcttc ctcgtcggcc agtggcgagc
     1801 caccgaaagc cgcatctacc gacatcgttc aggcggtgca aattgcgtcc aacggggatg
     1861 tacgtccggc gtcaccaccg gccggtccaa cctctgctgc gacgccggtc gcattcggcg
     1921 atgcacccga ggcgcaatca atccgaacgc ctgacggagc gagcggtgca gcgctgcgca
     1981 gcgacgtgcc attcgacaaa ttgtctggcc agttgcgagc ccaacctgcg gcgtctgcgg
     2041 aggcgggtcc gagcggcgcc gcggtgacct cgactctggc ggccgctt
//
LOCUS       DATAVD010000199         1862 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_949459, whole genome shotgun sequence.
ACCESSION   DATAVD010000199 DATAVD010000000
VERSION     DATAVD010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1862
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_949459"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..1546
                     /gene="istA"
                     /locus_tag="VHX39_03595"
                     /pseudo
     CDS             1..1546
                     /gene="istA"
                     /locus_tag="VHX39_03595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015895319.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS21 family transposase"
     gene            1543..>1862
                     /locus_tag="VHX39_03600"
     CDS             1543..>1862
                     /locus_tag="VHX39_03600"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3990240.1"
                     /translation="MNITELKRALGQLRLGGMATVLETRLHQAQAEPMAPIDLISCLI
                     SDELTRRADRLLERRRKQAAFRDANRTLDSFDFTFNPKMNLSLIFDLATCGFIAKRED
                     ALFLG"
BASE COUNT          399 a          602 c          560 g          301 t
ORIGIN      
        1 cgaagagaag aagaaacaag tcatcgcgct gggccaactg ggctgggcgc tgcgtcgtat
       61 tgaggaggcc accggcgttc ggcgggagac cgcagccgga tatctgaagg ccgaaggaaa
      121 gcaaaaccgg ccaatgaggt gaccaccggc ccagagccgg caaaaccggc caatgccggc
      181 gaggtgacca ccgggtcaga tgcgccgaaa acgtccaacg gctctgccgc cagcacgagc
      241 gaaccctggc gagatctcat cgaagcggcc ttgtcgcatg gccgcaacgg ggtgtccatc
      301 tggcaggaac tggtggacca gcacggcttc accggcgcct acgaaagcgt caagcgttac
      361 gtgcgcaagc ttcgcggaac gcaatcgccg gaagcgcgcg cgatcatcca gaccgcgcca
      421 ggtgagaaag cgcaggtcga ttacggcacc ggccccatgg tgcgcgacgc gcaaaccggc
      481 aagtaccggc gcacgcgtct tttcgtgctg acgctcggct tcagccgcaa gtgcgtccgg
      541 ctgctctgtt tccattccgg cacgcgcatc tgggtcgaac tgcatgagca ggccttccga
      601 cgcctcggtg gagcgaccaa agtcgtggtg ctcgacaacc tcaaggaagg cgtactcacg
      661 ccggacgtct acgatcccgc cgtgaatccg ctctatcgcg acatgctggc acacctatgg
      721 cgctgtcgcg atgccctgtc gtatccgaga tccggatcgc aagggcaagg tggaatcggg
      781 cgttggacat gcccaaaaga cacctttgaa agggcagcgt ttcgagagtc tggaggcggc
      841 gcaatcatac ctcgaccgct gggaagagcg ctgggctgat caacgcattc acggcagcac
      901 caaacgccag gtggccgcca tgttcgccga agagaaaccc tcgctgctgc ccttgccgct
      961 ggaaccgttt cgctattacc agcatggcga acgaaccgtg catctggacg gctgcgtcga
     1021 ggtcgaggcg gcatactacg gcgcgccgcc gggctggatc ggccgcatca tggtgcgggt
     1081 gcagtgggac ggcctccacg tgcgtctgct cgatccgcaa accggacagt tgctgcgtga
     1141 acatcagcgc cagcagcgcg gacgtcatcg catcaaagat gaagaccgcc cgaagcgcac
     1201 accgctcggc atcgtgcaac tgctggcgcg ggccgcccag gccggacccc acatcggcca
     1261 gttcgccaaa gccctgcacg agcggcaggc cgaagccgcg gtgcggcgca ttcagggcat
     1321 tctgtccttc acaaagaagt acggcgtggc ccgcgtcgaa gatgcctgtg ccgccgcgct
     1381 ggaactggaa gcttacgact accgcttcgt gcgccggtat ctggaacgca gatcggaacc
     1441 accaatcagt cttcggcagg tcgatcccct gatccgccaa ctcactcttt accgcgacct
     1501 gattgaagaa cgtacacagc aagacaacga ggaacccaac gaatgaacat caccgaatta
     1561 aaacgcgcat taggtcaact ccggctcggc ggcatggcca ccgttctgga aacacgttta
     1621 catcaggcgc aggccgagcc tatggccccc atcgatctca tctcgtgcct gatctcggat
     1681 gaactcacgc ggcgcgccga ccggctgctg gaacgccggc gcaaacaggc cgctttccgc
     1741 gatgccaacc gcacgctcga cagcttcgac ttcaccttca atccgaagat gaatctcagc
     1801 ctgattttcg atctggccac ctgcggcttc atcgccaaac gcgaagatgc tttattcctc
     1861 gg
//
LOCUS       DATAVD010000200         1552 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2996143, whole genome shotgun sequence.
ACCESSION   DATAVD010000200 DATAVD010000000
VERSION     DATAVD010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2996143"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..339)
                     /locus_tag="VHX39_03605"
     CDS             complement(<1..339)
                     /locus_tag="VHX39_03605"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422410.1"
                     /note="part of NADH-ubiquinone oxidoreductase complex I;
                     shuttles electrons from NADH, via FMN and iron-sulfur
                     (Fe-S) centers, to quinones in the respiratory chain; NuoF
                     is part of the soluble NADH dehydrogenase fragment, which
                     represents the electron input part of NADH dehydrogenase;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit F"
                     /protein_id="HEX3990241.1"
                     /translation="MLADQDRIFTNLYGLHDPMLKGARSRGDWDNTKAILERGRDEII
                     NEMKASGLRGRGGAGFPTGLKWSFMPKTSDRPCYLVVNADESEPGTCKDRDIIRHDPH
                     KLVEGCLVAGF"
     gene            complement(344..973)
                     /locus_tag="VHX39_03610"
     CDS             complement(344..973)
                     /locus_tag="VHX39_03610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HEX3990242.1"
                     /translation="MAEPDFEQPAHFAFDEDSETEIASEIRKYPPGRQASAVIAALYA
                     AQDQMKRLTGSAWVPTKAMDAVAERLGMAPIRVYEIATFYLMFNIAPIGKYHLQLCTT
                     TPCWLRGSDDVVAACREVTGIKGWKETSADGMFTMTEVECVGACVNAPILQVDDDFYE
                     DMDAEKAKALLQALREGHPPPPGSMTGRQTSAPEGGPTTLTSLQFAPES"
     gene            complement(977..>1552)
                     /locus_tag="VHX39_03615"
     CDS             complement(977..>1552)
                     /locus_tag="VHX39_03615"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003625274.1"
                     /note="Catalyzes the transfer of electrons from NADH to
                     quinone; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HEX3990243.1"
                     /translation="VDIGVFSAEQALAWGFSGPPLRASGVPWDLRRAQPYDKYGEVEF
                     KVPVTRNGDCYDRYLIRLIEMRESVNIIKQCLAKMQPGPVKIEDRKFSPPRRSEMKRS
                     MEALIHHFKLYTEGYHVPAGATYSVVETPKGEFGVYLVADGTNKPYRCKIRPTGFAFL
                     QAVDVMAKRHMLADVCAIIGSLDVVFGEIDR"
BASE COUNT          306 a          495 c          429 g          322 t
ORIGIN      
        1 gaaaccggca acgaggcagc cttccaccag cttgtgcgga tcgtgccgga tgatatcacg
       61 atctttgcag gtgcccggct ccgactcatc ggcattgacc acgaggtagc acggccggtc
      121 ggaggtcttc ggcatgaacg accatttaag tccggtcggg aaccctgccc cgccgcgacc
      181 gcgcagaccc gacgccttca tctcattgat gatctcgtcg cggccgcgtt cgaggatcgc
      241 cttggtgttg tcccagtcac cgcgtgatcg cgcgcccttc agcatcgggt cgtgcagacc
      301 gtaaagattg gtaaagatgc gatcctgatc cgccagcatg gtctcaactc tccggcgcga
      361 attgcaacga cgtgagcgtg gtcgggccac cttccggcgc cgacgtctgg cgtccggtca
      421 tcgagcccgg cggcggcgga tggccctcac gcaaagcctg aagcagtgcc ttggcctttt
      481 ccgcgtccat gtcttcgtaa aaatcgtcgt cgacctgcag gatcggcgcg ttgacgcagg
      541 caccaacgca ctcgacctcg gtcatggtaa acatcccgtc ggcgctggtt tctttccagc
      601 ccttgatgcc ggtgacctcg cggcaggctg ccaccacgtc gtccgaacca cgcagccagc
      661 acggtgtcgt ggtgcatagt tgcaaatgat acttaccaat cggtgcgata ttaaacatta
      721 aataaaatgt cgcaatctcg tacacccgga tcggcgccat gccaagccgt tccgccactg
      781 catccattgc cttggtaggc acccaggcac tgccggttag ccgtttcatc tgatcctgcg
      841 ccgcatacaa tgcagcgatc acagcactgg cctggcggcc cggcggatat ttccggattt
      901 cgctggcgat ctcggtctcc gagtcttcgt cgaatgcaaa atgcgccggt tgttcgaagt
      961 cgggttcggc catggtctac ctgtcgatct cgccgaacac gacgtccagc gatccaatga
     1021 tcgcgcaaac gtcggccagc atgtgccgtt tcgccatgac atcgactgcc tgcaggaagg
     1081 cgaagccggt cgggcggatc ttgcaacgat acggtttatt ggtgccatcg gcgaccagat
     1141 acacgccgaa ctcgcccttc ggggtttcca ccaccgagta ggtagcgccg gcgggcacgt
     1201 gataaccctc ggtataaagt ttgaaatgat ggatcaacgc ctccatcgag cgcttcattt
     1261 cactgcgccg cggtggacta aattttcgat cttctatctt cacaggccca ggctgcattt
     1321 ttgcgagaca ctgcttgatg atgttgacgc tttcgcgcat ctcgatcagc cgaatgagat
     1381 agcgatcgta gcaatcgcca ttccgcgtca ccggaacctt aaactccacc tccccgtact
     1441 tatcatacgg ctgggctcga cgcagatccc agggcacgcc ggacgcacgc aacggcgggc
     1501 cggaaaagcc ccacgccaga gcctgctcgg cactgaacac gccgatatcg ac
//
LOCUS       DATAVD010000201         4209 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_391685, whole genome shotgun sequence.
ACCESSION   DATAVD010000201 DATAVD010000000
VERSION     DATAVD010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4209
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_391685"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..1370)
                     /gene="dctA"
                     /locus_tag="VHX39_03620"
     CDS             complement(3..1370)
                     /gene="dctA"
                     /locus_tag="VHX39_03620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006835 - dicarboxylic acid transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate transporter DctA"
                     /protein_id="HEX3990244.1"
                     /translation="MAVLAHDEPVDVGRSAFGIHLLGKLYVQVLLGVVAGALVGYFYP
                     HFAVGLKPFGDGFIKAIRVVVTPVIFTTVVVGLATMADIGRIARVGLKALVYFEVMST
                     LALIIGLIVGNVWPAGVGIHANAATLDAHAVAGYVTGASHMTITDFLMNIIPNTFIDP
                     FAKGDVLPVLFLAVLFGLALCHLGERARPLIDVLDMVSHTLFRMVRLIMVFAPIGAFG
                     AMAFTIGRYGISTVLSLGELVGSVYLVSALFVIIALGGALRLAGFRLWQVLGHFKEEI
                     LFVFAATSAETMIPRSMEKLEALGCEKEVVGLVMPTGFSFNMDGTAIYMSMAVLFMAH
                     ATDTPLSFVQQLGMLLVMLFTSKGAAGVTGGGFIALAATMPALGVLPVAALTLIVGVD
                     RFMAEIRAATNLTSNIVATLVVGRWVDAIDPAYAAAVMSGRSVLRTNSPPDAMARRAA
                     DSTGK"
     gene            complement(1447..2610)
                     /locus_tag="VHX39_03625"
     CDS             complement(1447..2610)
                     /locus_tag="VHX39_03625"
                     /inference="COORDINATES: protein motif:HMM:NF028222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX3990245.1"
                     /translation="MYSHPNVKTAPDFPVPETMKAWVLGDPGQLSLSEKPTPVPDRAE
                     VLVRIDAVAICATDLEIIYHGPPAMIEGGMPFNKRFTPGHEYMGTVVALGAGVDEYAI
                     GDRVTVEIHAGCGQCKRCREGMYTSCHNYGLNYGDVNKGHRANGFTTDGGFAEYAVNH
                     INTLIHIEDEMSDEEATLVVTAGTAMYGLTELGGLVAGESVVVTGPGPIGLMAVAVAK
                     ALGASPVFLTGTRDNRLKMGVELGADHVVNARVEDAVEAVRRLNGGKGVDYVIECSGA
                     PNAINEAASMLNRGGRICLAAFPHEPATIDIANIVRNNIYLYGIRGEGKSATHRAEAF
                     MRQKRFDATKIHTHTFPLADLPTALRYARERIDDAIKVVVKAKAVEQTRMAAE"
     gene            2721..3632
                     /locus_tag="VHX39_03630"
     CDS             2721..3632
                     /locus_tag="VHX39_03630"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3990246.1"
                     /translation="MDVRFDDRVAIVTGAGAGLGRQHALLLASRGAKVVVNDPGGAVD
                     GTGGANAAADAVVTQIKAAGGEAVASYASVAEEAAAQTIIDTAIKTWGRLDILVNNAG
                     ILRDKAFNNMTMADYEFVNQVHHFGTAYCIKAAWPIMRKQSYGRIVVTTSGSGTVGNF
                     GQANYGAAKMAVNGLINVLRHEGGKYNIRCNAISPSAYTRMTESLLPPDIAPWMKPEL
                     VSPAVAWLCSEECDQNGEIIAATAGGYARVQYFVSEGAQFDPAEPVTIEMVRDSLERI
                     RDLSTAKPYFGMMGNVVEKLREMGRIK"
     gene            3714..>4209
                     /locus_tag="VHX39_03635"
     CDS             3714..>4209
                     /locus_tag="VHX39_03635"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990247.1"
                     /translation="MGQTTTATGWSWVRDISRYQWMVFLIAWLGWSLDNTDFSLFALV
                     LHPAMTELIGGHPTAADIGRVGGILSMAGLLGWAFGGFIFGILGDYFGRVRTLMFSVV
                     LVAIFTALQGFTHSTLTFGICRFFTGVGTGAEIILGIPLVAEAFADTHRAKILGIMMT
                     GGGFG"
BASE COUNT          825 a         1403 c         1222 g          759 t
ORIGIN      
        1 ctctattttc cggtgctgtc cgctgcacgc cgagccattg cgtctggcgg gctgttcgtg
       61 cgcaacacgc ttcggccgga catcaccgcg gcggcatagg cgggatcgat cgcgtccacc
      121 cagcggccga ccaccagcgt cgccacgatg ttgctggtca ggttggtcgc ggcgcggatt
      181 tcggccatga aacgatcgac tccgacgatc agcgtcaacg ccgccaccgg cagtaccccc
      241 agcgccggca ttgtcgccgc cagcgcaatg aaaccaccgc cggtcacgcc cgccgcgcct
      301 ttcgacgtga acagcatcac cagcagcatg ccaagctgtt gaacgaagga aagcggtgtg
      361 tccgtcgcgt gcgccatgaa cagcaccgcc atgctcatgt agatcgctgt gccatccatg
      421 ttgaaggaga agccggtcgg catcaccagg ccgacgacct ccttttcgca gcccagcgct
      481 tcgagtttct ccattgaccg gggaatcatc gtttcggccg aggtggcggc gaagacgaac
      541 aggatctctt ccttgaaatg ccccagcacc tgccaaagcc gaaacccggc caggcgaagc
      601 gcgccgccaa gcgcaatgat cacgaacagt gcgctgacca gatagaccga acctactagc
      661 tcacccagcg acaggacggt ggagatgccg tatcgcccga tggtgaacgc catcgcgccg
      721 aacgccccga tcggcgcgaa caccatgatc aggcgcacca tgcggaacag cgtgtgcgaa
      781 accatgtcca gaacgtcgat caacggccgc gcgcgttccc ccagatggca cagcgccagt
      841 ccgaacagca ccgcaaggaa cagcaccggc agcacgtcgc ctttggcgaa cgggtcgatg
      901 aaggtgttgg ggatgatgtt catcaggaag tcggtgatcg tcatgtggga tgcgcccgtg
      961 acgtagcccg ccacggcatg ggcatcgagt gtcgccgcat tggcgtggat gcccacgccc
     1021 gccggccaga cattgccgac gatcaggccg ataatcagcg ccagtgtcga catgacctca
     1081 aaatacacca gcgctttcag tcccacgcgg gcgatgcgtc cgatatcggc catcgtcgca
     1141 aggccgacca ccacggtggt gaatatgacc ggggtcacga cgaccctgat cgccttgatg
     1201 aacccgtcgc caaacggttt caatccgaca gcaaaatgtg ggtagaagta tccgaccaat
     1261 gcccccgcaa cgaccccaag caggacctgc acgtaaagtt tgcccaacag gtggatgccg
     1321 aaagcggagc ggccgacatc gaccggttcg tcatgggcaa gaacagccat cgatagctcc
     1381 ccaccttgcg ggcacgcttc ttccgtcgtg cccgcgaata cgttgtccta ccaaaccaac
     1441 cgttggctac tcggcggcca tacgggtctg ctcgacggcc ttggccttca ccacgacctt
     1501 gatcgcatcg tcgatacgct cccgcgcata gcgcagcgcg gtcggcagat cggcgagcgg
     1561 gaatgtgtgc gtgtggattt ttgtcgcgtc gaaccgcttt tgccgcatga acgcctcggc
     1621 acgatgcgtg gcgctcttgc cttcgccgcg gatgccgtaa aggtagatgt tgttgcgaac
     1681 gatattggcg atgtcgatcg tcgccggctc atgcgggaat gccgccagac agatccgccc
     1741 accgcggttc agcatcgaag ccgcctcatt gatcgcgttc ggcgcccccg aacactcgat
     1801 cacgtagtcc acgcccttgc cgccgttcag tcggcgcacc gcctcgacgg catcctcaac
     1861 ccgggcattg acgacatgat cggcccccag ttcgacgccc atcttcaacc ggttgtcgcg
     1921 cgtgccggtc aggaacaccg gtgacgcacc cagcgccttg gcaaccgcca ccgccatcag
     1981 cccaattggc cccggtccgg tcaccaccac gctctcaccc gccaccagcc cgcccagttc
     2041 ggtcagtccg tacatcgccg tgccggcggt cacaaccaga gtcgcctctt catcggacat
     2101 ctcgtcttcg atatgaatca gcgtattgat gtggttcacg gcatattccg cgaacccccc
     2161 atccgtggtg aagccgttgg cgcggtggcc tttgttcacg tcgccatagt tcaggccgta
     2221 gttgtggcag gacgtgtaca tgccctcccg gcaccgcttg cactggccgc aaccggcatg
     2281 gatctccacc gtcacccggt cgccgatcgc gtactcgtca acaccggcgc ccagcgccac
     2341 cacggtgccc atatattcgt gacccggcgt gaaccgcttg ttgaacggca tgccgccttc
     2401 gatcatcgcc ggcggaccgt gatagatgat ctccaggtcg gtcgcacata tcgctaccgc
     2461 atcgatccgc accagcactt ccgcgcgatc aggcaccgga gtcggctttt cgctgaggct
     2521 caactgtccc ggatcaccca gaacccaggc cttcatcgtc tccggaaccg ggaagtccgg
     2581 cgcggtcttc acgttgggat ggctgtacat tggcatctcc ttcttcgccg aggcgttgtc
     2641 catggcatat cacgcaggta caatcgatat caacagcaac cccgggttgc tgttggaatg
     2701 caaaaaaagg aaaccgatcc atggatgtcc gttttgatga ccgagtggcg atcgtcaccg
     2761 gtgccggcgc tggccttggc cgccagcacg ctttgctgct cgcctcgcgc ggcgccaagg
     2821 ttgtggtgaa cgatcccggc ggagccgtag atggcaccgg cggcgccaac gccgcggccg
     2881 acgccgtggt gacgcagatc aaggccgccg gcggcgaagc cgtggccagt tacgcctccg
     2941 tcgccgagga agccgccgca caaaccatca tcgacacggc gatcaaaacc tggggccggc
     3001 tggacatcct ggtgaacaac gccggcatcc tgcgcgacaa ggcgttcaac aacatgacca
     3061 tggcggatta cgaattcgtc aaccaggtgc atcacttcgg caccgcctac tgcatcaagg
     3121 cggcctggcc gatcatgcgc aagcagtcct atggccggat cgtggtcacc acgtccggtt
     3181 ccggcaccgt cggcaatttc ggccaggcca actacggcgc cgcgaaaatg gcggtgaatg
     3241 gcctgatcaa cgtgctgcgc catgaaggcg gcaaatacaa catccgctgc aatgcgattt
     3301 cgccgtccgc ctatacccgc atgacggagt cgctcctccc gcccgacatc gccccctgga
     3361 tgaagcccga actggtttcc cccgccgtcg cctggctatg cagcgaggaa tgcgaccaga
     3421 acggcgaaat catcgccgcc accgccggcg gctacgccag ggtgcagtat ttcgtcagtg
     3481 aaggcgccca gttcgatcct gcagaaccgg taacgatcga aatggtccgc gacagtcttg
     3541 aacgtattcg cgacctgtcc accgctaagc cgtattttgg catgatgggc aatgtcgtgg
     3601 aaaaactgcg ggaaatgggg cgcatcaagt agcccattcc caaacgccga caaacctgcc
     3661 taagcttccc gacggagcgc gccgcaagaa gagcagcgcc cgcgggaggc agcatgggac
     3721 agacgacgac ggccactgga tggtcctggg tacgcgatat cagccgctat caatggatgg
     3781 ttttcttgat cgcctggctc gggtggtcat tggacaacac cgacttcagc ctgttcgctc
     3841 tggtgctgca cccggcgatg accgaattga tcggcgggca cccgaccgcg gcggatatcg
     3901 gccgtgtcgg cggcatcctc agcatggccg gactcctcgg atgggcattc ggcggcttca
     3961 tcttcggaat cctcggcgat tatttcggac gcgttagaac gttgatgttc agtgtcgttc
     4021 tggtggccat cttcaccgcg ttgcaaggct tcacccacag cactttgaca ttcggcatct
     4081 gccggttctt caccggcgtc ggcaccggcg cggaaatcat cctgggcatc cccttggtgg
     4141 ccgaggcctt cgccgacacg caccgcgcca agatcctggg catcatgatg accggcggcg
     4201 gcttcggca
//
LOCUS       DATAVD010000202         5518 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_764841, whole genome shotgun sequence.
ACCESSION   DATAVD010000202 DATAVD010000000
VERSION     DATAVD010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5518
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_764841"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..359
                     /locus_tag="VHX39_03640"
     CDS             <1..359
                     /locus_tag="VHX39_03640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3990248.1"
                     /translation="TIGGGIAGLAGCLFTNWGGFISPTVFSLSQSAQIIIFVLVGGLG
                     TLIGPILGAVAIEYLISIIGSQQTLNADLILGVVLVAFVLLVPEGVVPVLRNLLQRLI
                     PQRRVAPAPSAKVAQS"
     gene            356..1075
                     /locus_tag="VHX39_03645"
     CDS             356..1075
                     /locus_tag="VHX39_03645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3990249.1"
                     /translation="MSVPLLQTTGLTMRFGGVTAVDAVDFALAEMELRCLIGPNGAGK
                     STFFKMLTGQLQPTTGTIRFRGRETTGAKTHEIARLGVGIKTQVPNVFNGLSVYENVF
                     VAASRAHTLRRAQAIVDEVLTRTGLTDIAYRMVGQLAHGQRQWVEISAVLAQEPDLIL
                     LDEPAAGMTYEEVVRTSELIREINRAQALIVVEHDMQFIRMIAKTVTVFNQGRILVED
                     SVDAVLTNQAVRDVYLGKQAA"
     gene            1072..1779
                     /locus_tag="VHX39_03650"
     CDS             1072..1779
                     /locus_tag="VHX39_03650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3990250.1"
                     /translation="MMLTVSGLRSGYGRIPILGGISLSVGQGEFVGVLGHNGMGKTTL
                     LKALMGYLPATAGQVTLDDQDITRATPAMRARRGLGYVPQGRDIFPALSVHENLRMGC
                     LLSKTDERGTIDRVLTIFPRLTRLLERPGGALSGGEQQLLALARCLCGAPRLVLLDEP
                     TEGIQPSIVEEIVETLQSLRASHGLTMILVEQDLQFIAALADRVLIIQKGVITREMQP
                     RDATDPSLVAEFVGMGS"
     gene            1808..3322
                     /locus_tag="VHX39_03655"
     CDS             1808..3322
                     /locus_tag="VHX39_03655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX3990251.1"
                     /translation="MAVRRPTTEQMQELLFDLGMQMQPELMEEFRGLMEGSIASYDVV
                     DALPDEKPLVRYPRTPGYRPSGEENRYNAWYVKTTIKGAPGGKLAGKTVALKDNVCLA
                     GVPMMNGAATLEGFVPDLDATIVTRMLDAGATILGKAHCECFCLSGGSHTNATGPVHN
                     PHKHGYSAGGSSSGSGALVAAGEVDMAIGGDQGGSIRMPSSFCGIYGMKPTWGLVPYT
                     GVMPIESTIDHTGPMTATVADNALLLEVLAGEDGLDPRQYAPKVAAYTEALGRGVAGL
                     KIGIVREGFGWPNSEPDVDAKVKAAGALLAKLGASVEEIGLPMHRIGKDIWAPIALEG
                     LQVQMMNGNGMGFNWKGLYTVGLLDAHAAWRERANDLSDSLKISMFLGEYFVKHYRGR
                     YYAKAQNIARRLKAAYDAALSTYDLLLMPTLPMKATPIPPADAPLGLYLQRAFEMIAN
                     TAPFDVTGHPAMTVPCGMGDGLPIGAMLIGKQWDEVTIYRAAAAFEQAGDWKAF"
     gene            complement(3808..5145)
                     /locus_tag="VHX39_03660"
     CDS             complement(3808..5145)
                     /locus_tag="VHX39_03660"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX3990252.1"
                     /translation="MRIKSIVLTLAGIVIVAGAVAAGVAGWMVFQPGPYAFATGTPVT
                     LAAYKGPSPTGAPVELAKADAAARGAYIVRMADCEACHTAKGGVPFAGGRAFVLPFGT
                     IYTPNLTPDPQTGIGKWTDADFLNAVHRGVAPDGSRYYPAFPYPSYTLLTDDDVLAIK
                     AYLFALKPVKQANKPNTFAFPYDQRWLMTIWAVLFDPNHRFRPVEGQSAAWNRGAYLV
                     EAAGHCGECHTPRNLMQALDRRRKFAGGVAEGWNAYNISADTVSGIGDWSVEELTAYL
                     STGHAKGHGVASGPMREAVALSLSRLTKSDIAAIVTYLRTVPASAGDLPKLAGPAPAT
                     PRVAGIENPVGQRMFEGNCLSCHAWTGAGTVREDAQLTGVRAVNDPSAANVVQMILGG
                     GGKPDTPHPYMPGFGYAYSDAEIAAVANYVTARFGSTPSHVTPTDVANLRRQN"
     gene            complement(5149..>5518)
                     /locus_tag="VHX39_03665"
     CDS             complement(5149..>5518)
                     /locus_tag="VHX39_03665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004273313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX3990253.1"
                     /translation="AGDVRVTRVVVAADVGKVINPDILLAQIQGGVVFGLSAVLHGKI
                     TFAGGRVEQGNFNDYRILRIDETPPIEVHIAQSTENAGGIGEPGTVIVQPAVANAVFA
                     ATGVQLTRMPIDPALIAKVA"
BASE COUNT          965 a         1662 c         1894 g          997 t
ORIGIN      
        1 tcaccatcgg cggcgggatc gccgggctgg ccggctgcct gttcaccaac tggggcggct
       61 tcatcagccc caccgtgttc agcctgtcgc aatcggccca gatcatcatc ttcgtgctgg
      121 tcggtggcct gggcacgctg atcggcccca tcctcggggc ggtggcgatc gagtatctga
      181 tctccatcat cggatcgcag cagacgctga acgccgacct gatcctgggc gtggtgctgg
      241 tggccttcgt gctgctggtg ccggaaggcg tggtgccggt cctgcgcaac ctcctgcagc
      301 gtctgatccc gcaacgacgc gttgcgccgg cgccatcggc caaggtggcg caatcatgag
      361 tgtcccattg ctgcagacca ccggcctgac catgcgtttc ggcggtgtca ccgcggtcga
      421 tgcggtggac ttcgccctgg ccgaaatgga actgcgttgc ctgatcggtc cgaacggggc
      481 cggcaaaagc acgtttttca agatgctgac aggtcagttg cagccgacaa ccggaaccat
      541 ccgcttccga ggccgcgaga ccaccggcgc caagacgcac gagatcgctc gtttgggcgt
      601 cggcatcaag acccaggtgc ccaacgtgtt caacgggctg tcggtgtatg aaaacgtgtt
      661 cgtcgccgca tcacgagcgc acacgctgcg ccgagcgcag gcgatcgtcg atgaggtgct
      721 gacccgtacc ggcctgaccg acatcgccta tcgcatggtc ggccagttgg cccacggcca
      781 gcggcaatgg gtcgaaatca gcgccgtgct ggcgcaggaa ccggacctga tcctgctgga
      841 cgaacccgcc gccggcatga cctatgagga ggtggtccgc acctccgaac tgatccgtga
      901 gatcaaccgc gcgcaggcgc tgatcgtggt ggagcacgac atgcagttca tccggatgat
      961 agccaaaacg gtgaccgtgt tcaaccaggg ccgcatcctt gtggaggatt ctgtggacgc
     1021 ggtgctgacg aatcaggcgg tgcgcgacgt ttatttgggc aagcaggcgg catgatgctg
     1081 accgtgtccg gcctgcgttc gggttatggc cgcatcccca tcctgggcgg catttccctg
     1141 agtgtcggac agggcgaatt cgtcggcgtg ctcggccata acggcatggg caaaacgacg
     1201 ctgctgaagg cgctgatggg ctatctgccg gcgacggccg gccaggtgac actggacgat
     1261 caggacatca cgcgtgccac gccggcgatg cgggctcggc gcggcctggg ttatgtgccg
     1321 cagggccgcg atatcttccc cgcgctcagc gtgcacgaaa acctgcgcat gggctgcctg
     1381 ctgtcgaaaa ccgatgaacg cggcaccata gaccgcgttc tgacgatctt tccgcgactg
     1441 acacggttgc tggaacggcc cggcggcgcg ctgtcgggcg gcgagcagca attgctggcg
     1501 ctggcgcgct gtctttgcgg agcgccgcgt ctggtgctgc tcgatgaacc caccgaaggc
     1561 atccagccgt ccatcgtcga ggagatcgtc gaaacgctgc aatcgttgcg tgcctcgcat
     1621 gggctgacga tgatcctggt tgagcaggac ttgcagttta tcgcggcgct ggcggatcgg
     1681 gtgctgatta tccagaaggg tgtgatcact cgcgagatgc agccgcggga tgccaccgat
     1741 ccgtcgctgg tggcggaatt cgtcggcatg ggcagttaac gcgtacagtc agacagggag
     1801 aaagatcatg gcagtcaggc gtccgaccac ggagcaaatg caggagcttc tgttcgatct
     1861 cggtatgcaa atgcagccgg aactcatgga ggaatttcgc ggcctgatgg agggatccat
     1921 tgcgtcgtac gacgtggtgg acgcgttgcc ggatgaaaag ccgctggtgc gctatccgcg
     1981 gacaccggga taccgcccga gcggggagga gaaccggtat aatgcgtggt acgtgaagac
     2041 aacgatcaag ggcgcgccgg gcggcaagct ggctggcaag acggtggcgt tgaaggacaa
     2101 cgtctgcctg gccggcgtgc cgatgatgaa cggcgcggcg actttggaag gcttcgtgcc
     2161 cgatctcgat gcgacgatcg tgacgcgcat gctggacgcc ggcgcaacga tcctcggcaa
     2221 ggcgcattgc gaatgcttct gcctgtccgg cggcagccat accaatgcga ccggtccggt
     2281 acacaatccg cacaagcatg gttattccgc cggcggatcg tcttccggca gtggcgcgct
     2341 ggtcgcggcc ggtgaggtgg acatggcgat cggcggtgac cagggcgggt cgatccgtat
     2401 gccatcgtcg ttctgcggca tctacggcat gaagccgacc tggggcctgg tgccctatac
     2461 cggcgtgatg ccgatcgaat cgacgatcga ccataccggc ccgatgaccg ccaccgtggc
     2521 cgacaacgcg ttgctgctgg aagtcctggc cggcgaggac gggcttgatc cgcggcaata
     2581 cgccccgaag gttgcagcct ataccgaggc gctgggtcgt ggcgtggcgg gattgaagat
     2641 cggcatcgtc agggaaggtt tcgggtggcc gaattcggaa cccgacgtcg atgcgaaagt
     2701 gaaggcggcc ggcgcgttgc tggcgaaact gggtgccagc gtggaggaaa tcggcttgcc
     2761 catgcatcgc atcggcaagg atatctgggc accgatcgcg ctggagggcc tgcaggtcca
     2821 gatgatgaac ggcaacggca tgggtttcaa ttggaagggc ctgtacactg tcggtttgct
     2881 ggatgctcat gccgcgtggc gggagcgcgc caatgatctg tccgactcgc tgaagatatc
     2941 gatgtttctg ggcgagtatt tcgtcaagca ctatcgtggg cggtactacg ccaaggcgca
     3001 gaacatcgcg cgtcggctga aggcggcgta tgacgcggcg ctgagcacgt acgatctgtt
     3061 gctgatgccg acgctgccta tgaaggcgac gccgattccg ccggcggatg cgccgctggg
     3121 gctttatttg cagcgcgcat tcgaaatgat cgccaacacc gcgccgttcg acgtgaccgg
     3181 ccatccggcg atgacggtcc cctgcggcat gggggacggc ctgccgatcg gcgccatgct
     3241 gatcggcaaa caatgggacg aggtcacgat ctaccgcgcc gccgccgcgt ttgaacaggc
     3301 cggggactgg aaggcgtttt agcggggttt atcgcaagct tccatcgcgg acgtgccggg
     3361 cacggaacat ttgttggcga tgcaccgggg gacaggctca gtacggcgat cgtctgctgg
     3421 cgcccaaggc tgaggtgatc cgtttaatac caatcgccct tgatgttgac ccatcggcag
     3481 caccgagcaa ccgtcatggc gagcgcagac tcgccatcca tgcctttgtt tccgctcgta
     3541 aaaggcgtgg atagcggcat gcgccggcat gacggacggg gtcaaccgaa gagtttgcat
     3601 caatgccggt tggtataagc acttgcccgc agcaaccgag cattggaggg acgacgagat
     3661 gagccaatcc gcacctgacg gggaacacct catatgaggc gtggatagca cgcctccgcc
     3721 tgccatgacg gttgcgcaac ggcgccgggc aaaacttgtt ccctggaccg tcagcggctg
     3781 catttgcgca tgtctccagt ttttacgtca gttttgccgg cgcaaattgg cgacgtcggt
     3841 cggcgtgacg tgcgagggcg tgctgccgaa gcgcgccgtc acgtagttgg cgaccgcggc
     3901 gatctcggcg tcggaatagg cgtagccgaa gccgggcata tacggatgcg gggtgtccgg
     3961 cttgccgcca ccgccaagaa tcatctgcac gacattggcg gcactcgggt cgttgaccgc
     4021 ccgcacgccg gtgagctggg cgtcctcccg gaccgttccg gctccagtcc aggcgtggca
     4081 gcttaggcag ttgccctcga acatgcgctg gccgactgga ttctcgattc ccgcaacgcg
     4141 cggtgtcgcg ggggccggac ccgcgagctt cggcagatcg ccggcagaag caggcaccgt
     4201 gcgcagatag gttacgatcg cggcgatgtc ggatttagtc agcctcgaca ggctgagcgc
     4261 gacggcctcc cgcatcgggc cggaggcgac gccgtgtccc ttggcatggc cggtcgagag
     4321 gtacgcggtg agttcctcca ccgaccagtc gccgatgccg ctgaccgtgt cggcgctgat
     4381 gttgtaggcg ttccagccct cggcgacgcc gccggcgaat ttgcggcgtc ggtcgagcgc
     4441 ctgcatcagg ttgcgcggcg tgtggcattc gccgcaatga cccgccgcct ccacgagata
     4501 ggcgccgcgg ttccatgcgg cgctttgccc ctccaccggg cggaagcgat ggttcgggtc
     4561 gaacagaacc gcccagatcg tcatcaacca gcgctggtca taggggaagg cgaaggtgtt
     4621 gggcttgttc gcctgtttca ccggcttcag cgcgaaaagg taggctttga tcgccagcac
     4681 gtcgtcgtcg gtcagaagcg tgtaggaggg gtacggaaag gcgggatagt agcgtgaccc
     4741 gtccggcgcc acaccgcgat gtaccgcgtt gaggaagtcg gcgtcggtcc atttgccgat
     4801 gccggtttgc ggatcgggcg tcaggtttgg tgtgtagatc gtgccgaacg gcagcacgaa
     4861 tgcgcgcccg ccggcgaagg gcacgccgcc cttggcggta tggcaggcct cgcagtcggc
     4921 catgcggacg atgtaggcgc ctctcgcggc ggcatcggct ttagcgagtt cgaccggagc
     4981 gccggtgggc gaagggccct tgtaagccgc gagcgtgacg ggcgtacccg tggcgaacgc
     5041 atagggaccc ggctggaaca ccatccagcc ggccacgccg gcggccaccg cccccgcgac
     5101 gattacgatc ccggcaagcg tgagcacgat tgacttgatg cgcatggttc aggccacctt
     5161 cgcgatcagt gccgggtcga tcggcatgcg cgtcagttgg acgccggttg ccgcgaagac
     5221 ggcgttggcg accgcgggtt gcacgatcac ggtgcccggt tcgccgatgc cgcccgcgtt
     5281 ctcggtgctc tgcgcgatat gcacctcgat cggcggcgtc tcgtcgatac gcaggatgcg
     5341 gtagtcgttg aagttgccct gctcgacccg cccgccggcg aaggtgatct tgccgtgcag
     5401 cacggcggaa agcccgaaga cgacgccacc ctgtatctgc gccagcagaa tatcgggatt
     5461 gatgaccttg cccacgtccg cggcaaccac gacgcgggtg acgcggacgt cgcccgcg
//
LOCUS       DATAVD010000203         2030 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_764911, whole genome shotgun sequence.
ACCESSION   DATAVD010000203 DATAVD010000000
VERSION     DATAVD010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_764911"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /gene="rbsC"
                     /locus_tag="VHX39_03670"
     CDS             <1..200
                     /gene="rbsC"
                     /locus_tag="VHX39_03670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="functions to transport ribose at high affinity;
                     forms a complex with RbsA2C2B; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ribose ABC transporter permease"
                     /protein_id="HEX3990254.1"
                     /translation="GVALQGGRGTIVGTILAVILLGVLENGLIILNVNSFWQDIAQGA
                     LLVTAVVIQQRRAGAKGVGLP"
     gene            197..421
                     /locus_tag="VHX39_03675"
     CDS             197..421
                     /locus_tag="VHX39_03675"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HEX3990255.1"
                     /translation="MSATPGCLVFVGTVMRPVPHFAAQGGAAIALSPSGDNIYVSNRR
                     PGGISLLRPDAVTGALQLIGCRPSGGKTRR"
     gene            complement(455..>2030)
                     /locus_tag="VHX39_03680"
     CDS             complement(455..>2030)
                     /locus_tag="VHX39_03680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glucosidase"
                     /protein_id="HEX3990256.1"
                     /translation="SEHGADSGGAGGRETRNREWLHMVNDSIISMPDKWEYPWFAAWD
                     LAFHAMALSTVDIDFAKQQIDLMLDSFYLHPTGQMPAYEWNFSDVNPPVHAWATIFLY
                     RTEKALGREPDFEFMARVFTKLSINFTWWANRKDRFGKNLYEGGFLGLDNIGVFDRSA
                     PLPTGGYLEQADGTAWMALFCQNMLEIGGVLAVHDAAYEPLATKFVEQFLWIGRAMNG
                     VGAEGMWDEEDGFYYDVLRLPDGQAKRLKVRSVVGLLPICAVTVVEPEQRMRAPNIVR
                     IFTERLRRMPDLRDSVHATGAGHRGVGERGILALVSEARLRRILSRMLDENEFLSPHG
                     IRALSRYHADHPFVFSVQGHDYRVGYLPAESDSGMFGGNSNWRGPVWMPVNALIIRAL
                     LSYYLYYGDTFRIECPTGSGQWMNLFEVSREIAHRLTGIFLRDEQGRRPLFGGTETFQ
                     SDPHWRDCLLFFEYFHGDNGAGIGASHQTGWTGIVAKLIEIFGRVDMDAFLSEGKIAG
                     FTRTKEAEPEAASATH"
BASE COUNT          421 a          638 c          582 g          389 t
ORIGIN      
        1 gcggcgtggc gctgcagggc gggcggggca ccatcgtcgg caccattctt gcggtcattc
       61 tgctcggcgt gctggaaaac gggctgatca tcctcaacgt caacagcttc tggcaggaca
      121 tcgcgcaagg cgcgctgctg gtcaccgcgg tggtcattca gcaaaggcgt gcgggggcca
      181 aaggcgtcgg gcttccatga gcgcgacgcc aggctgcctg gttttcgtcg ggacggtgat
      241 gcgccccgtc ccgcatttcg cggcgcaggg cggcgcggcg atcgccttgt cgccctcagg
      301 cgacaatatc tacgtcagca atcgccggcc gggcggcatc agcctgctgc gccctgacgc
      361 tgtgacgggc gcgttgcagc tcatcggttg ccggccgtcg ggcggcaaga cgcgtcgttg
      421 atacggaagc caattaccca tggggctttg ccactcagtg cgtagccgag gcggcctcgg
      481 gttcggcttc cttcgtgcgg gtgaaccctg cgatcttgcc ttctgacaaa aatgcgtcca
      541 tgtcgacccg accgaaaatt tcgatcaact tcgccacaat accggtccat cccgtctggt
      601 ggctggcgcc aatgccggcg ccattgtcgc cgtgaaaata ctcaaagaac aatagacagt
      661 cgcgccaatg aggatcgctt tggaacgtct ccgtaccgcc aaagagcggc cttcgccctt
      721 gttcatcgcg gagaaagatg ccggtcagcc gatgagcgat ctcgcgactc acctcaaata
      781 gattcatcca ctggccggag ccagtcggac attcaatcct gaacgtgtca ccgtagtata
      841 agtagtaact cagtagggca cggatgatca gggcattcac cggcatccag accggaccgc
      901 gccaattgga gttgccgccg aacatgccgc tatcggattc cgccggaagg taacccacac
      961 gatagtcatg gccctgcaca gaaaacacaa aggggtgatc agcgtggtac cgggacagcg
     1021 cgcggatgcc gtgcgggctg aggaattcgt tctcgtcgag cattcgagag aggatcctgc
     1081 gcaacctcgc ctcgcttaca agagccagaa tgccccgctc gccgacgccc cgatggcccg
     1141 cccctgtcgc gtggacacta tcgcgaaggt cgggcattcg ccgaagacgt tccgtaaaga
     1201 tcctgacaat gttcggcgct ctcatccgct gctctggttc aacgaccgtg acggcacaga
     1261 tcggcagaag cccaacgacg gaacgaactt tcagccgttt tgcctgtccg tcgggcaggc
     1321 gcaggacgtc gtaatagaac ccatcctcct catcccacat cccctccgcg ccgaccccgt
     1381 tcatcgcccg accaatccag aggaactgtt cgacgaattt cgtcgccaga ggctcatagg
     1441 ccgcatcgtg cacggccaaa acgccgccga tttcaagcat attctggcag aatagggcca
     1501 tccaggccgt cccgtccgcc tgctcgaggt aaccccccgt cggcaagggt gcgcttcggt
     1561 cgaacacgcc aatattgtcg agaccaagaa agccgccctc gtagaggttc tttccaaacc
     1621 ggtccttgcg gttggcccac caagtgaaat tgatcgagag cttggtgaac acgcgtgcca
     1681 tgaactcgaa atccggctca cgcccgagtg ccttctcggt cctgtacaag aagatcgtcg
     1741 cccaggcgtg gaccggagga ttgacgtcgc taaaattcca ctcgtaagcg ggcatttgcc
     1801 cggtcgggtg cagataaaag gaatctaaca tcagatcgat ctgctgcttc gcaaaatcga
     1861 tatcgaccgt ggacagagcc atcgcatgaa aggctaaatc ccaggcagcg aaccagggat
     1921 attcccactt atccggcata gagatgatgc tgtcattcac catgtgcagc cattcgcgat
     1981 tccgggtctc gcgtccgcct gcgcctcccg agtctgcgcc atgttctgaa
//
LOCUS       DATAVD010000204         4045 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2626288, whole genome shotgun sequence.
ACCESSION   DATAVD010000204 DATAVD010000000
VERSION     DATAVD010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4045
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2626288"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..344
                     /locus_tag="VHX39_03685"
     CDS             <1..344
                     /locus_tag="VHX39_03685"
                     /inference="COORDINATES: protein motif:HMM:NF020694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1932 domain-containing protein"
                     /protein_id="HEX3990257.1"
                     /translation="KMSYAGITKGFTALGAAMMLAASRAGTAEALQAELSSSQPALFN
                     WLTRQMPRMYSKAYRWVAEMEEIAAFVGEDPAAAKFYQGAAQLYERIAADFEGPNKET
                     AMLDAFCTKKG"
     gene            351..1532
                     /locus_tag="VHX39_03690"
     CDS             351..1532
                     /locus_tag="VHX39_03690"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEX3990258.1"
                     /translation="MAQDMPRGIHRFPPMDRVVYGVPLAEALADEVRLRDSRAVYVMA
                     SGTLTRQTDVVDTVRDVLGNRLAGVCAKIGAHTPRVDVVAAANEARAAKADLVLTVGG
                     GSVTDAAKMVGLCLGNDVTAPEQLDAFRAWITPEGKNERPPTKPPGVRFVAVPTTLSA
                     GEFTSFAGCTDTARHVKESFGTALMMPSAVILDPAVTLHTPEWLFLSTGIRAVDHAVE
                     DICSINPTPFSDGASLHALRLLSRGLQAVRQDPGDLAARLDCQLGAWMSIMGSQNGVS
                     KGASHGIGHVLGGTADVPHGYTSCVMLPHVLRFNEPVNAARQVWVSEALGSPGVPAAD
                     AVAALIASLGLPATLRSVGVKPEQLDAIARQSMHDRWVHTNPRKIDGPPVVRELLDAA
                     W"
     gene            1942..2403
                     /locus_tag="VHX39_03695"
     CDS             1942..2403
                     /locus_tag="VHX39_03695"
                     /inference="COORDINATES: protein motif:HMM:NF015298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEX3990259.1"
                     /translation="MTQKGSREVTVTKVFPARLANKVRQHFKPILILGVAICSSLVGH
                     ARACSVSDGQTGVASWYGPGLQGNRTASGGTFDMWAMTAAHPCLPMGTKLLVTVLGTG
                     RSLVVTVNDRLPSRRRVLDLSAGAARVLGISGQGLAVVELSSASPRLITAW"
     gene            complement(2421..2840)
                     /locus_tag="VHX39_03700"
     CDS             complement(2421..2840)
                     /locus_tag="VHX39_03700"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX3990260.1"
                     /translation="MEILEMSFPLRVEEYALIPDSGGAGTWRGGLGVRRVWRVLERDA
                     HAAVCCERTVTPPFGLAGGLAGAPAKLTLRLPDGSARKLTSKGGFTAPAGSLVVVEAP
                     GSGGYGPPGGRDPKQLAEDLADGYVSAKAAARDYGAA"
     gene            complement(2822..>4045)
                     /locus_tag="VHX39_03705"
     CDS             complement(2822..>4045)
                     /locus_tag="VHX39_03705"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX3990261.1"
                     /translation="AEEMKIVLAKTAYSPLLKVAGDYSCGIFDVAGNMVAQGPDLPIH
                     LGSMPDAVRAVVQAFPDVAPGDVFIHNDPYQGGSHLPDVNVVAPAYYGTRLLGFGCVR
                     AHWPDIGSATPGSYGAVTEIYGEGLRLPPVRLYRAGKPDPGIEAIIFANVRTPAERLG
                     DLRAQVAANRRAETRLAALSEKYGVDVVLGIMAEVQDYSETMMRAALRRLPDGEASFE
                     DVFDGDGVIAAGDSEDRTFSVRLRVRKSGDSISVDFTGSDPQVAGPMNAPLTVTASGV
                     YCALKMIVDPGSLIPPNSGCWRPVSVTAPEGSVVNARLPAPVVYANHEMSHRIADMVM
                     AAMFQITPRTVMAGSQGTSAVVTFGGTDYRNGERYVSYESVKGGFGARPVKDGINAVA
                     STISNMMKRRSKFSK"
BASE COUNT          749 a         1294 c         1266 g          736 t
ORIGIN      
        1 tgaaaatgtc ctacgccggc atcaccaaag gctttaccgc cctgggcgcc gcgatgatgc
       61 tcgccgcttc gcgcgccgga actgccgagg cgttgcaggc agaactctcc agcagccagc
      121 ccgctttgtt caactggctg acccggcaga tgccgagaat gtactccaaa gcgtatcgtt
      181 gggttgcaga aatggaagag attgccgcat ttgttggtga ggacccggcg gctgccaaat
      241 tctaccaggg tgcagcacaa ctctatgaac gcattgccgc cgacttcgaa gggccgaaca
      301 aggaaaccgc gatgctcgac gcgttctgca ccaagaaggg ctgacccggc atggctcagg
      361 acatgccgcg cgggattcat cgcttcccgc cgatggaccg cgtcgtctat ggcgtgcccc
      421 tggcggaggc gctggccgat gaagtccgcc ttcgtgactc gcgcgccgtt tacgtgatgg
      481 cgagtggcac actcacgcgt caaaccgatg tcgtcgatac ggtgcgcgac gttctgggca
      541 accgcctggc cggtgtgtgc gcaaagatcg gcgcccacac gccgcgggtc gatgtggttg
      601 cggcggcgaa cgaggcgcgg gcagcgaaag ccgatctcgt gctgacggtt ggcggcggct
      661 cggtgaccga cgccgccaag atggtcgggc tgtgcctcgg caatgacgtt acggcgccgg
      721 agcaacttga cgcattccgt gcctggatca caccggaagg caagaacgag cgccctccta
      781 cgaagccgcc gggggtacgg ttcgttgcgg taccgaccac gctatcggcc ggcgaattca
      841 cctcgttcgc cggttgcacc gatacggcac ggcatgtgaa ggaaagtttc gggacggcat
      901 tgatgatgcc gtcagcggtg atcctcgacc cggcggtcac gctgcacact ccggagtggc
      961 tgttcctgtc gaccggtatc cgcgccgtgg atcatgccgt ggaagatatt tgctcaatca
     1021 atccaacgcc attctcggac ggtgcttcgc tgcatgcgct gcgcctgttg tcgcgtggcc
     1081 tgcaggcggt ccggcaagat ccaggcgatc tggcggcgcg gttggactgc cagttgggag
     1141 cgtggatgtc gatcatgggt tcacagaacg gtgtgagcaa gggcgccagc catggcatcg
     1201 gccatgtcct tggcggcacc gcggatgtgc cgcacggtta cacatcctgc gtcatgctgc
     1261 cgcatgtgct gcggttcaac gagccggtca acgccgcccg tcaggtctgg gtgtccgagg
     1321 ccctgggctc gcccggagtg cctgcggccg acgccgtggc ggcgttgatc gccagcctgg
     1381 gcctgccggc aacccttcgc agtgtcgggg tcaagccgga gcaactggac gccatcgccc
     1441 ggcagtcgat gcatgaccgg tgggtgcaca caaatcctcg taagatcgac gggccgccgg
     1501 tggtgcggga actgctcgac gcagcgtggt aaagtcgatc tgaccgcgcc gaaaagtgaa
     1561 ccgcccggca atcgatgggt gaccggcgga tgcctaccaa cccacgcaag attgacaggt
     1621 ctgttgtcgt gcggcggttg cagagcgccc ctgggtgttc aattgtaagt tcgacgattt
     1681 ctcacccctg agacttttct cgttttgtca cgcccgcggc ggcccggttc gcaaccatgc
     1741 attcatgatc gtttctgatc cgtgacagta caactgtatt ttcctgcaat gaaggggttg
     1801 ccatctaaat gaaaccgggg catgggtaga aagatccaca ggtccacaag caaaactgtg
     1861 gcaataatgc cagcacagtg tggcacatga gaggaaatct cagatcgtta cgggagcgat
     1921 caatccatcg gagacttcgt catgacccag aaaggttcac gagaagtgac tgttactaaa
     1981 gtttttcctg ccagactggc gaacaaggtc aggcagcact tcaagccaat ccttatactg
     2041 ggcgtggcga tatgctcgag tctcgtgggg cacgcgcgag catgctccgt ctcggacggg
     2101 caaacgggcg tggcgtcgtg gtacggccca gggttgcagg gaaaccgaac ggctagcggc
     2161 ggaacattcg atatgtgggc catgacagca gcacacccgt gtctgccgat gggcacaaag
     2221 cttctcgtga cggtgctcgg taccggccgc agcctggtcg tcacggtgaa tgaccggctg
     2281 ccgtcgcggc ggcgcgtgct cgatttgtcg gccggcgctg ctcgtgtgct tggcatctca
     2341 ggccagggtt tggccgtggt ggaactgtcg tcggcctcgc ccagactgat caccgcctgg
     2401 taattgctgc cgcgacgggc ctacgcggcg ccgtagtccc gcgccgcagc cttggccgag
     2461 acgtaaccat ccgccaaatc ctcggccaac tgcttcgggt ctcgcccgcc aggaggccca
     2521 tatccgccgg atcccggtgc ctcgaccaca accagcgatc cggccggcgc ggtaaacccg
     2581 cctttgctgg tcagcttccg agcgcttccg tccggcaatc gtaaggtcaa ctttgcgggt
     2641 gccccagcca atccgccggc cagcccaaag ggcggcgtca cggtccgttc gcaacacacg
     2701 gcagcgtgag cgtcacgctc caacacgcgc cagacccggc ggacgcccag gccgccacgc
     2761 caggtaccag cgccgccgct gtcggggatc agggcgtatt cctcgacccg gagcggaaag
     2821 ctcatttcga gaatttcgat cggcgtttca tcatgttgct gatggtgctg gcgaccgcgt
     2881 tgatgccgtc cttgacgggg cgggcaccga agccgccctt gaccgactcg taactcacat
     2941 aacgttcgcc gttgcgataa tcggtgccgc caaatgtcac gactgccgag gtcccctgcg
     3001 agcccgccat caccgtccgc ggtgtgatct ggaacatcgc cgccatcacc atgtcggcaa
     3061 tccggtgcga catctcgtga ttggcataga cgaccggggc cggcagcctg gcattgacca
     3121 cgcttccctc cggcgcggtc acggacaccg gtcgccagca gcctgaattg ggcggaatga
     3181 ggctgccggg atcgacaatc attttcagcg cgcaatagac cccggatgca gtcaccgtca
     3241 gtggcgcatt catcggcccg gctacctgcg gatccgagcc ggtgaaatcc acgctgatcg
     3301 aatcgccgga cttccgcacc cgcagccgaa ccgagaacgt gcgatcttcg ctgtcgcctg
     3361 ctgcgatgac gccgtcgccg tcgaatacat cctcgaacga cgcctcgcca tcgggcagtc
     3421 gccgcaacgc cgcgcgcatc atggtttcgg agtagtcctg cacctccgcc atgattccca
     3481 aaaccacgtc caccccatac ttttcggaca atgccgccag cctcgtctca gcccgccggt
     3541 tcgctgccac ctgggcgcgc agatcgccca gtcgttctgc gggcgtacgg acgttggcga
     3601 agatgatggc ctcgatgccc gggtccggct tccccgcacg atagagccgc accggcggca
     3661 gacgcagtcc ctcgccgtag atttccgtca cggcaccgta actgccgggc gtggcgctgc
     3721 cgatatccgg ccagtgggct cgcacgcaac caaacccgag caagcgcgtg ccataatacg
     3781 ccggcgcaac gacattcaca tcgggcagat gggagccgcc ctgatacgga tcgttgtgaa
     3841 tgaacacatc gcccggcgcg acatcgggaa acgcctggac aacggcgcgc accgcatcgg
     3901 gcatcgagcc gagatggatc ggcaaatccg gcccttgcgc caccatgttg ccggcgacgt
     3961 cgaagatgcc gcaggaatag tcgccggcga ccttcagcaa cggcgaatag gcggttttcg
     4021 ccaggacgat cttcatttcc tcggc
//
LOCUS       DATAVD010000205         2356 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_577184, whole genome shotgun sequence.
ACCESSION   DATAVD010000205 DATAVD010000000
VERSION     DATAVD010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2356
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_577184"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1121
                     /locus_tag="VHX39_03710"
     CDS             <1..1121
                     /locus_tag="VHX39_03710"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX3990262.1"
                     /translation="ELPDGTREIAQYANLPNKRRLLRLVDRPPNYATPVDVFSNVVTP
                     NDRFFVRYHLAGVPTADDMDGWTLSITGDAVTHPARLKMSDLLDLPSNDVLAVCQAPG
                     NRRGLISPHVAGVQWTDGGMGCAQWSGPALRDVLKAAGVKPNALEVWLSGADKPAMAG
                     TPPFQKSISMEKALDDKTIVAIAMNNAPLPLLNGYPARLVVPGWVGTYWMKHLTSIEV
                     SSSPLKNFWMQTADRVPAGLFPVLRPFVSQETSTTVPVTELVVNSLIADPLEGQERDR
                     SGFNIQGIAWDRGSGIDRVEVSIDGGKTWQDALLDRPLGPYAYRRFFLQTELMRRGTY
                     RLVSRATSHTGERQAERFKANPGGYHNNVPRPIAVTVT"
     gene            1118..1408
                     /locus_tag="VHX39_03715"
     CDS             1118..1408
                     /locus_tag="VHX39_03715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990263.1"
                     /translation="MKRLTIALFAALVSQHALADPPTPLTPGAGEDVTSARCGACHTS
                     DYIVMNSTFLTADQWKAEVTKMRTAFGAPIDDATAAQIVAYLAAHYAVPAKP"
     gene            complement(1949..>2356)
                     /locus_tag="VHX39_03720"
     CDS             complement(1949..>2356)
                     /locus_tag="VHX39_03720"
                     /inference="COORDINATES: protein motif:HMM:NF014691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEX3990264.1"
                     /translation="AEGIPSGRFGLTHLRAIHRHLFQDVYDWAGELRTVEIAKDGHQF
                     QFRRFIATGMQDVHQRLVRAAFLRGLSRTEFASAAGRIIGDVNYVHPFREGNGRPQLF
                     YREQLAERAGHPIDLAPAGTARLACRVACISCW"
BASE COUNT          439 a          785 c          732 g          400 t
ORIGIN      
        1 ccgagttgcc cgacggcacc cgggagatcg cccaatacgc caacctgccc aataaacggc
       61 gactgctgcg cctcgtcgac cgtccgccga attatgcgac cccggtcgac gttttctcca
      121 atgtcgtgac acccaacgac cgcttcttcg tgcgctatca cctcgccggc gtgccgacgg
      181 ccgacgacat ggacggctgg accctgtcca tcaccggcga tgccgtcacc catcctgccc
      241 ggctgaaaat gagcgacttg ctcgacctcc catccaacga tgttcttgct gtctgccagg
      301 cccccggcaa tcgccgaggc ctgatttccc cccacgtcgc cggggttcag tggaccgatg
      361 gcggcatggg ctgtgcgcaa tggagcgggc cggccctccg cgacgtcctg aaagcagccg
      421 gcgtcaagcc gaacgcgttg gaggtctggc tgagtggcgc cgacaagccg gcaatggccg
      481 ggacgccacc gtttcagaaa agcatttcga tggagaaggc actcgatgac aagaccatcg
      541 tggccatcgc catgaacaac gcgccgctgc cgctgctgaa cggctatccg gcccggctgg
      601 tggtgccagg ctgggtcggc acctattgga tgaagcacct gaccagcatc gaggtcagtt
      661 cgtcaccgct gaagaatttc tggatgcaga ccgccgatcg cgtccccgcc ggcctgttcc
      721 cggtgttgcg gccattcgtg tcccaggaaa cctcgacaac cgtccctgtc accgaactcg
      781 tcgtcaactc gctgatcgcc gacccgttgg aaggtcagga acgggaccgt tcgggtttca
      841 atatccaggg catcgcctgg gatcgcgggt cggggatcga ccgggtcgag gtctcgatcg
      901 acggcggcaa gacctggcag gacgcgctgt tggatcggcc gctcggtccc tacgcctatc
      961 gccggttctt cctgcagacc gagttgatgc gccgcggcac ctaccggttg gtgagccggg
     1021 ccaccagcca caccggcgaa cgtcaggccg aacggttcaa ggcgaacccg ggcggctacc
     1081 ataacaatgt gccgcgcccg atcgcggtga ccgtgacgtg aaacgcctca cgatcgcgct
     1141 gttcgccgcg ctggtcagcc agcacgccct ggccgatccg cccacgccac tgacacccgg
     1201 cgcaggtgag gatgtgacca gcgcgcggtg cggcgcctgc cacacctcgg actacatcgt
     1261 catgaacagc acattcctga cggcggacca gtggaaggcc gaggtaacga agatgcgcac
     1321 cgcgttcggc gccccgatcg atgacgccac cgccgcacag atcgtcgcct atctggcggc
     1381 gcactacgcg gtgccggcaa aaccctgagt tgcgcttcgc cggaggtgtg tcccgctgcc
     1441 gactttaccg ctgggcactg atcggagcgc agcgtgtgat ggggcccgaa ccgcaacgtt
     1501 taataccagt ccgcgttaag tccgactgcc agccgccgtc ccgtcatgcc gacggaggtc
     1561 ggcatccacg ccttttacac acgaacacag aggcttggat ggcgggttct tcgcccacca
     1621 tgacggtggg tggccgatgt cagtgtgtca taccaaccgg cgttgatgca gactcttcgg
     1681 ttgaccccgt ccgtcatgcc gacgaaggtc ggcatccacg ccttttacga gcggaaacaa
     1741 aggcatgtag aagcctgcgc tcgccatgac ggttgcacgg cggtgccgat gggtcaacaa
     1801 caagggcgat tggcatcagt ctttcgacag attgatgtaa gcagccgact ctgtgcccct
     1861 gttccgccgg agactcggcc tcgcaaatcg cctcggctac gggtggccgg tcagggcgcg
     1921 ggcgatctcg gccgccattg gctcataatc accagcatga gatgcacgcg acgcggcaag
     1981 ccagccgcgc ggttccagcc ggggcaaggt cgataggatg ccccgcccgc tcggccaact
     2041 gctcacggta gaaaagctgc ggccggccgt ttccttcgcg gaaggggtga acatagttca
     2101 cgtcgccgat gatacggccc gccgccgagg cgaactccgt ccggctcaag ccacgcaaaa
     2161 aggcggcccg cacaagccgc tgatgaacgt cctgcatgcc ggtggcgatg aagcggcgga
     2221 actggaattg atgcccgtcc ttggcgattt ccacggtacg aagctccccg gcccaatcgt
     2281 aaacgtcttg gaacaggtgc cgatggatgg cgcgaagatg ggtcaaaccg aaccggccgg
     2341 atgggatgcc ctcggc
//
LOCUS       DATAVD010000206         2653 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_577388, whole genome shotgun sequence.
ACCESSION   DATAVD010000206 DATAVD010000000
VERSION     DATAVD010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2653
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_577388"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1089)
                     /locus_tag="VHX39_03725"
     CDS             complement(<1..1089)
                     /locus_tag="VHX39_03725"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3990265.1"
                     /translation="MKYDVIIVGGGAAGSVMASRLAANTHTSVLLLEAGPDYPNPAHI
                     PDDVKFGHTRFAEAPDSPHNWALRGTITAEQGQIHVAQGKVIGGGSSINGQAMQRGFP
                     EDFDSWAALGNDEWAYDKILPYFRKSERDLDIQDECHGSDGPMPVRRRQTGPMPVLQQ
                     AFHSACLQAGFGTTNDTNGRQPAGLGVSPSNNIDGVRMSTAMTHLSSVRHHLNLTVRG
                     GVFVRKILIRNGEAVGVEAESGGQVFQIEAGRVVLSSGAIRSPHLLMLSGIGPQDHLR
                     EFGIATVCHLPGVGQSLWNHLSTQMTFKVKEGIPLTSQKDAVHFSLHYTAEGSPAEND
                     MVLRTSPVVDERRERVPGVRTKYLIGDVP"
     gene            1235..1696
                     /locus_tag="VHX39_03730"
     CDS             1235..1696
                     /locus_tag="VHX39_03730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX3990266.1"
                     /translation="MKQPPDRLRESFGSLIALTGRQWRRAVDRRLQPFGLTEATWLPL
                     IHLARAPVPPRQKDLAASLVLDGSSVVRLLDALETAGLIERREESGDRRAKTIGLTAR
                     ALSIIDQVEAASRDIRDAALIGLSAKDIEIATRALEQVSRNLEPALEKSAP"
     gene            1743..>2653
                     /locus_tag="VHX39_03735"
     CDS             1743..>2653
                     /locus_tag="VHX39_03735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX3990267.1"
                     /translation="MQQPNSGATTTMAVAEPGGMTSTTRLVITVCTVMATLMQSLDST
                     IANVALPYMQGTMSASEDEINWVLTSYIVAAAIMTAPTGFLAARFGRTRLFVTAVTGF
                     TIASILCGMAQSLGEVVLFRALQGVFGAALVPLSQAVMYDIYPPEKRGTAMALWTMGV
                     MVGPISGPMLGGWLTDNYSWRWVFYINVPFGIVTVLGLLTFLKETTHGNSARLDWIGF
                     GALSLAIGAFQTMLDRGETLDWFSSREIIVEAALAALGFYIFLVQFTLAPRPFLPPRL
                     FKDRNFVAGMALYFIMGSIMYATLALLV"
BASE COUNT          482 a          794 c          816 g          561 t
ORIGIN      
        1 cggcacatcg ccgatcagat atttggttcg cacgcctggc acgcgctccc gccgttcgtc
       61 gacgaccggg ctggtccgca gcaccatgtc gttctccgcg ggtgaccctt cggccgtgta
      121 atgcagcgag aaatgcaccg catctttctg gctggtgagc gggatgccct ctttgacctt
      181 aaacgtcatc tgggtgctga ggtgattcca caggctctgg ccgacgccgg gcagatgaca
      241 aaccgttgca ataccgaatt cgcgcaaatg atcctgcggg ccgatgcctg acagcatcag
      301 cagatgaggg gagcggatcg caccggagct cagcacgacc cggccggctt cgatctggaa
      361 gacctgaccg ccgctttcag cttccacacc gacggcctcg ccattcctga tcaggatttt
      421 gcggacaaac acaccgccgc gcaccgtcag gttcaggtga tgacgcaccg aactgagatg
      481 ggtcatggcc gtgctcatac gcacgccatc gatgttgttc gacggcgaca cgccgaggcc
      541 cgcgggttgc cttccattgg tgtcattcgt ggtgccgaac ccggcctgca aacaggcgct
      601 atggaaagcc tgttgaagca ccggcattgg gccggtctgg cggcggcgaa ccggcatcgg
      661 tccatccgag ccatggcact cgtcctgaat gtcgaggtcg cgttccgact tccggaagta
      721 cggcaggatc ttgtcgtacg cccattcatc gttaccaagc gctgcccagg agtcgaagtc
      781 ctcgggaaag ccgcgctgca tggcctgacc attgatggac gagccgccgc cgatcacttt
      841 gccctgcgcg acgtggatct gcccttgttc cgcggtgatg gtgccgcgca aagcccagtt
      901 gtggggtgag tccggcgcct cggcaaatcg cgtgtggccg aattttacgt cgtccggaat
      961 gtgggccggg ttgggataat ccggccccgc ttccagcagc agcacggacg tgtgggtatt
     1021 ggcagccaat cggctggcca tgaccgaccc ggcggccccg ccgccaacga tgatgacatc
     1081 gtatttcatc cggctctcct ttgttgacgc tccctcggac ccccggcccg tagtttcgat
     1141 cgtcccgcct ttttgcggga cccgcaacac gcgctggtac ttgtcaaaat agatggcatc
     1201 ccatataatg gcaagccatc tgattggaga cgagatgaag caacctccgg accggctgcg
     1261 cgaaagcttc ggcagcctca ttgctctgac gggccggcaa tggcggcggg cagtcgatcg
     1321 ccgcctgcaa ccattcggac tgaccgaggc aacgtggttg ccgctgatcc atctcgctcg
     1381 cgcaccggtg ccaccgcggc aaaaagatct tgctgcgtcc ttggttcttg atggttcgtc
     1441 cgtcgtgcgt ttgctggatg cgctggaaac cgccggttta atcgagcgcc gagaggagag
     1501 cggcgaccgc agagccaaga ccatcggcct gaccgctcgc gcattgtcga tcatcgatca
     1561 ggttgaggct gcgtctcgcg atatccgcga cgccgcactg atcgggctgt ccgcgaagga
     1621 tatcgaaatc gcaacccggg cactcgagca ggtcagccgc aatctcgaac cggcattgga
     1681 gaaatctgcg ccatgaccag gtttgtgatg tcgacgggct gatacgagat agcgaggatc
     1741 cggtgcagca accgaactct ggtgcaacga cgacgatggc ggtggccgaa ccgggaggaa
     1801 tgacctcgac gacccggctg gtgattacgg tctgcaccgt catggcaacg ttgatgcagt
     1861 cgctggacag cacgattgcc aacgttgcgt tgccatacat gcaaggcacg atgtccgcca
     1921 gcgaggatga gatcaactgg gtgctgacca gttacatcgt tgcagcagca atcatgacgg
     1981 cacccaccgg cttcctggcc gcccggttcg gacgcacgag actgttcgtc accgctgtca
     2041 ccggcttcac cattgcctcc atcctgtgtg gcatggccca gtcgttgggt gaggtcgtgc
     2101 tgttccgtgc gttgcaaggc gtgttcggcg ctgctctggt gccgctgtcg caagctgtga
     2161 tgtacgatat ctatccgccc gagaaacgcg gcaccgccat ggcgttgtgg accatgggcg
     2221 tcatggtcgg gccgatatcc ggtcccatgt tgggtggctg gctcaccgac aattacagct
     2281 ggcgctgggt gttttatatc aatgtcccgt ttggcattgt gacggtactg ggactgttga
     2341 cctttttgaa ggaaacaacc cacggcaact cggcacggct cgactggatc ggcttcggtg
     2401 cattgagtct ggccatcggg gcgttccaga ccatgctcga ccgtggcgaa actctggact
     2461 ggttcagttc gcgggaaatc attgtcgaag cggcgctggc agcgctcggg ttctatatct
     2521 tcctggtgca gttcactttg gcgccaaggc cgtttctgcc gccgcgattg ttcaaagatc
     2581 ggaactttgt tgccgggatg gctctgtatt tcattatggg atcgatcatg tatgcgacgc
     2641 tggctctgct ggt
//
LOCUS       DATAVD010000207         4526 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3183625, whole genome shotgun sequence.
ACCESSION   DATAVD010000207 DATAVD010000000
VERSION     DATAVD010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4526
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3183625"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..536
                     /locus_tag="VHX39_03740"
     CDS             <1..536
                     /locus_tag="VHX39_03740"
                     /inference="COORDINATES: protein motif:HMM:NF039733.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF6338 family protein"
                     /protein_id="HEX3990268.1"
                     /translation="VGSFIPSRRVREKEVLLLRYLTATAFNYAICSPLIYLLAFGVLF
                     RANPIGQAFSWFVIIFVAPIILALIRARIVQRDGLSWLYRLLGLRPISPIPTGWDWVF
                     GTTDPCFVLITLADGTEIAGFFGGRSMASSEQEHKDIYIEQVYTVPSDGGSWEAVEGS
                     LGMYVDGSKIVYIEFRR"
     gene            complement(783..1526)
                     /locus_tag="VHX39_03745"
     CDS             complement(783..1526)
                     /locus_tag="VHX39_03745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3990269.1"
                     /translation="MAASLRISGLEAGYGAVSVLHGVTIDVREGETVALLGTNGNGKS
                     TLMKCIMGMVLPSAGSIEAEIDGTRFNLVGMTTEAIVDLGIGFVPEGRRLFPRLTVTE
                     NLLMGAFRKVARPSIDRNLAFCFELFPRLAERRKQLAGSMSGGEQQMLALARALMSAP
                     KLLLIDEPSVGLAPLLVARTIDSIKALKEGYQLSVLMAEQNFIQAIRIADRGYVIVHG
                     RIEFEGASAEDLNNNDIIRELYLGAKGMA"
     gene            complement(1516..2253)
                     /locus_tag="VHX39_03750"
     CDS             complement(1516..2253)
                     /locus_tag="VHX39_03750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3990270.1"
                     /translation="MSAAPILQVSGLGKRFGGFVALADIELDVGHGERLGLIGPNGSG
                     KSTLVNCLCGTLRNESGSVRFEGRALDGLKAHQRTRLGLARTFQLPRPFGTLTLAENL
                     RIPLLYAVHGRESSAGHDIDRRCLDLLAMVALADKADRLPKDLTQIEMRKLELARAMA
                     AEPRMLIADEAMAGLSHGEVDDILALLVRLNEEQGITIVLIEHIMRAVLSFSQRLVVL
                     VAGRKIADGDPADVVRQDDVVAAYLGS"
     gene            complement(2250..3176)
                     /locus_tag="VHX39_03755"
     CDS             complement(2250..3176)
                     /locus_tag="VHX39_03755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3990271.1"
                     /translation="MKNPVFVLWLIVAAILTFVIARLIDNAYFYFAGYVVLQYIVLAT
                     AWNILGGYTGYVNFGISAFIALGAYSTVVLHKLTNLPLIVMILVAGGVTGLVGLGTGY
                     LTLRLRGTFFGIATLAMAVVVQTLVTNWDFVGGSRGAYIIRPAKVAYLGIDYIQYLFL
                     MMLGLCVLAVGIARAIEKSRLGYGFATIRDDELAAEASGVPTLRLKLIATALSGGLMG
                     MAGAPLPYYVTYLDPVSAFSLSYAVNTIAMPLIGGTSSWLGPIIGAILLGTLQQVATV
                     TISSALSLLIVGVMLVVFVVAAPKGIIGWFWK"
     gene            complement(3177..4055)
                     /locus_tag="VHX39_03760"
     CDS             complement(3177..4055)
                     /locus_tag="VHX39_03760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3990272.1"
                     /translation="MDLSFDLLGNALVSGLLLGGFYASATIGVSISFGMLDIVNIAHP
                     AFILLGSYVAYTMNSNFGFDPILVSIVAMPLFYCLGVAIYHVYDVSFERRGDTALRGL
                     AFFFGLLFITEVALVLIFGVDYRLVDAVYIQTTLHFGVIDVPLRLLVPALVSLAMMGL
                     LQLYLSRTFIGRAIQAVAQDPLALRLMAADPSRIKRIAFGLSIASASVAGAILIMVQP
                     IEPSVGRDYIGRIFAICVLGGLGSFAGTLVAAIILGVMENLTATFYGPSWSPAVSFGF
                     LLLTLAFRPSGLFGRA"
     gene            4275..>4526
                     /locus_tag="VHX39_03765"
     CDS             4275..>4526
                     /locus_tag="VHX39_03765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3990273.1"
                     /translation="MANLTGRIAWITGAGSGIGEAAALALAEDGATVILTGRTREKLE
                     GVARRIHNSAGQAHVQQADLTDKDQVRRVGAYIKATFDRL"
BASE COUNT         1017 a         1409 c         1291 g          809 t
ORIGIN      
        1 tggttggcag tttcattcct tcgaggcggg tcagggaaaa ggaggtcctt ctccttcgct
       61 accttaccgc aactgcgttt aactacgcga tctgctcacc cctgatttat cttctggcgt
      121 tcggagtgtt atttcgcgcg aatccaattg ggcaggcgtt ctcctggttc gtaatcatct
      181 tcgttgcccc gataattctg gccctgatcc gcgccagaat tgtgcagcgg gatggcttga
      241 gttggcttta tcggctgttg ggcctccgtc caatcagtcc gatcccaacc ggatgggact
      301 gggttttcgg aacaaccgac ccatgtttcg tgctgatcac gttagccgat ggcaccgaga
      361 ttgcgggatt ctttggcggg cggtccatgg cgtcatccga gcaagagcat aaggacattt
      421 atattgaaca ggtgtatacg gtgccttccg acggtggatc gtgggaggca gtcgaaggct
      481 ctcttggtat gtatgttgac ggttccaaaa tcgtgtatat cgaattcagg aggtgaactc
      541 tatggcaagt tctgaccggc gtatggccca ggacgattac gaacccctga ccgaaggcta
      601 tcagcctgga aaatcaacac ctctccagaa aggctatgcg ccgagcacca acggcagcca
      661 ggctcagcaa accgcgccgc ggccgccgag cggcggatcg agtgcctcca agccagcgca
      721 aaaatgaccg ctactggtcg aagacgaagc aagcgcggga aacctgagcc cggttggacg
      781 actcaagcca tgccttttgc ccccagatac agctcccgga taatgtcgtt attgttcaaa
      841 tcttctgccg acgcgccctc gaactcaatt cgcccgtgca cgatcacata gccccggtcg
      901 gcaatccgga tcgcctggat aaagttttgt tccgccatca gcacggacaa ctgatagcct
      961 tccttcaacg ccttgatact gtcgatcgtt cttgccacca gcaacggtgc cagtcccacg
     1021 ctcggttcat cgatcagcag cagcttcggc gccgacatca gcgcccgcgc cagcgcgagc
     1081 atctgttgct caccgccgct catggatcct gcgagttgct tgcgccgttc cgccaacctc
     1141 ggaaatagtt cgaagcaaaa tgccaggttg cggtcgatcg acggccgcgc cactttgcgg
     1201 aacgcgccca tcagcaaatt ctcggttacc gtcaggcgag gaaacaaccg ccgcccttcc
     1261 ggcacgaaac caatcccgag atcgacgatc gcctcggtcg tcatgccgac gaggttgaag
     1321 cgcgtgccat ctatttcggc ttcgatcgag ccggcggacg gcagcaccat tcccatgatg
     1381 catttcatga gtgtcgactt accgttgccg ttggtgccca acagggcaac cgtttcgcct
     1441 tcgcgcacgt cgatggtgac accgtgcagc acgctgacgg caccatatcc cgcctccagg
     1501 ccggagatgc ggaggctagc tgccaagata cgccgccacg acgtcgtcct gccgcaccac
     1561 atcggctgga tcgccatcgg cgatcttgcg gcccgcgacc agcaccacga gtcgttgcga
     1621 aaacgacagg actgcccgca tgatgtgctc gatcagcacg atggtaatgc cttgttcctc
     1681 attcagccgc accagcaagg ccagaatgtc atccacttcg ccatgcgaca aaccggccat
     1741 cgcttcatcg gcgatcagca tccgaggttc cgccgccatg gcgcgggcca gttccagctt
     1801 gcgcatttcg atttgagtca ggtcttttgg cagccggtcg gctttatccg ccagagcgac
     1861 catcgccagc aggtccaggc aacggcgatc gatgtcgtgg ccggcgctgc tttcgcgccc
     1921 atgcactgca taaagcagcg ggattcgcaa attctctgcc aatgtcagcg tgccaaatgg
     1981 gcgcggcaac tgaaacgttc gcgccaggcc cagtcgagtg cgctgatggg ctttcagtcc
     2041 gtccaacgcg cgcccctcga aacgcacgct cccgctttca tttcgcaacg tgccgcacag
     2101 acaattcacc agcgtgcttt tgcctgagcc gttgggcccg atcaaaccga gccgctcgcc
     2161 atggccgacg tccaactcga tatctgccag cgcaacaaac ccgccgaaac gtttgcccag
     2221 accggagacc tgcaagatcg gagcagcgct cacttccaga accaaccaat gatgcccttg
     2281 ggcgccgcga ccacgaacac caccagcata acgccgacga tcagcagcga cagcgcggac
     2341 gagatcgtga ccgtcgccac ctgctgcaac gtgcccaaca aaatggcgcc aatgatcgga
     2401 ccgagccaac tggaggtgcc accgattagc ggcatggcga tcgtattgac tgcgtaactc
     2461 aggctgaacg ccgagaccgg gtcgagatag gtcacgtaat acggcaacgg tgcacccgcc
     2521 atgcccatca gcccgcccga caatgcagtc gcaatcagtt tcaggcgcag ggttgggaca
     2581 cccgatgcct cggccgcgag ttcgtcgtcg cggatggtgg caaagccata accgaggcgg
     2641 gatttttcaa tcgctcgagc gataccgacg gccagcacgc acaaccccag catcatcagg
     2701 aacaaatatt ggatgtagtc gatgccgaga tacgccacct tcgccggccg gatgatataa
     2761 gcgccgcgcg aaccgccaac gaaatcccag ttggtgacca gcgtttgcac cacgacggcc
     2821 atcgccaggg ttgcgatccc aaagaacgtc ccgcgcaacc gcaacgtgag atagccggtg
     2881 ccgagcccaa ccagtccggt gacgcctccg gccaccagga tcattacgat cagcggcagg
     2941 ttggtcagct tgtgcagcac gaccgtgcta taggcgccca gggcgatgaa cgcggagatg
     3001 ccgaagttta cgtagccggt gtagccgccg agaatattcc atgccgtcgc cagcacgata
     3061 tattgtagca cgacatagcc ggcgaaatag aaataggcat tgtcgatcag gcgcgcgatg
     3121 acgaacgtca aaatggcggc cacgatcagc cacaggacga agaccggatt tttcacttat
     3181 gcccgcccga acaagccact gggccggaat gccagggtca atagcaggaa cccgaacgac
     3241 accgcgggcg accacgaggg tccgtaaaac gtcgctgtca aattctccat aacgccaaga
     3301 atgatcgctg ccaccagcgt gccggcgaaa cttccgagac cacccagcac gcagatcgca
     3361 aagatgcggc caatgtagtc gcggccgacc gacggctcga tcggctgcac catgatcaga
     3421 atcgcgcccg cgaccgaagc ggaggcaatc gacagtccga atgcgatacg tttgatccgg
     3481 ctcggatccg ctgccatcaa ccgcaaagcc agcgggtcct gggctaccgc ctggatcgcg
     3541 cggccgatga aggtgcgtga caaataaagt tgcaacaggc ccatcattgc cagcgaaacc
     3601 agcgccggca ccagcagccg caacggcaca tcgatgacgc cgaagtgcaa cgtcgtctgg
     3661 atatagacgg cgtccaccag acggtaatcg acgccgaata tcaggaccag cgcgacttcg
     3721 gtgatgaaca gcaggccgaa gaagaacgcc aggccgcgca aggcggtgtc gcctcggcgt
     3781 tcgaaggaca cgtcgtagac gtgataaata gcgacaccca ggcaatagaa cagcggcatg
     3841 gcgacgatcg acaccaggat cggatcgaag ccaaaattgc tgttcatggt gtaggcgacg
     3901 tacgacccca gcagaatgaa cgccggatgc gcaatgttga cgatgtcgag catgccgaac
     3961 gagatcgaca cgccgatcgt cgccgacgcg tagaaccctc ccagcaacag accggagacc
     4021 agggcattgc ccaataaatc gaacgacaga tccatgattc gcgcttgtga cgttaccccg
     4081 cggggcaatg tgaccgatgg cgcgtgggaa cgccagaggg gttaaccatg gattccgttc
     4141 gccgcacttg ttgcacgcaa acgtaggagc gttctgccga cgacgaactg agcgacgtaa
     4201 ccagcagaga ccttgctctc gcggctcagg gccatttgaa tgcgacctga cctcggtcag
     4261 gaaggacatt gcacgtggcc aatctcacgg gaagaatcgc ctggatcacc ggcgcgggca
     4321 gcggcattgg tgaggctgcc gctctggcgc tcgcggagga tggtgcgacc gtcatcctga
     4381 ccggccggac gcgggaaaag ttggagggtg tcgcccggcg catccacaat tccgccggtc
     4441 aggcgcatgt gcagcaggcc gatctgaccg acaaggatca ggtgcgacgc gtcggcgcat
     4501 acatcaaggc gacgttcgac cggctg
//
LOCUS       DATAVD010000208         7641 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1695526, whole genome shotgun sequence.
ACCESSION   DATAVD010000208 DATAVD010000000
VERSION     DATAVD010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7641
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1695526"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            148..1227
                     /locus_tag="VHX39_03770"
     CDS             148..1227
                     /locus_tag="VHX39_03770"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX3990274.1"
                     /translation="MNLIGISGMSQTKDKADLDGQIRATKIMTSPVVTVGPDASIPEI
                     ANLLLDKHISAVPVVGSGGIPLGIVSEGDLIGRTEPNRLARIDWWLRLIGGRLPLDEV
                     FIKRLKGEGRTARDVMSAPLVTVSENTDISEIARLFAIHHIKRVPVVRDGQLVGIVSR
                     ANLLRMVAAGHPNEKKPETERKRGGLLTSLFGEYHLPAWETVAGIKASMPSPTTHELP
                     LAAADFRELVKDFHSGEVIHRDEAHRQASARRRERAKQLIDEHVFDDGWRELIHRARV
                     AAENGERECMLLQFPSQLCIDGGRAINVHEKGWSASLRGRPAEIFLRWERELKSRGFL
                     LSARIITYPEGKPGDIGLFLVWADE"
     gene            complement(1493..2698)
                     /locus_tag="VHX39_03775"
     CDS             complement(1493..2698)
                     /locus_tag="VHX39_03775"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990275.1"
                     /translation="MKWFIAATAGLMAATCLAGVTMAADTPGVTANEIKIGNTMPYSG
                     PASSYGAIGKVEAAFFGMVNDQGGVAGHKINFISYDDGYSPPKTLEQVRRLIEEDQVA
                     FLFQTLGTPTNSAIVRYVNQKNVPHLFVATGAAKWGDYKQYPWTTGFQPDYRTEAQIY
                     AKYILKEKPDAKIGILYQNDDFGKDYLAGMKEVLGERYAKMVTEVSYEPTDATIDSQI
                     VSLQASGVNVLLAAAAPKPAAQAIRKVADLGWKPMFLMSNVSISVGSVIAPAGVDKAV
                     GLISTGYLKDPTDHQWDNDPGNKQWRAFMAKYMPGADLTDNNYVYGYAAATAMLQVLK
                     QCNGDFSRENIMKQAENLHDLELPTVLPGIKASTSHTDHRPLKAMRLEKWDGKTWVLF
                     GDIIEASPS"
     gene            3435..3680
                     /locus_tag="VHX39_03780"
     CDS             3435..3680
                     /locus_tag="VHX39_03780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990276.1"
                     /translation="MRTTLTLDTDVSIELEELRRKRGLSLKDAVNHALRRGLRAMANG
                     DKARPTFITRSVDLGLPRVPLDNVAEALVTADGESFH"
     gene            3677..4123
                     /locus_tag="VHX39_03785"
     CDS             3677..4123
                     /locus_tag="VHX39_03785"
                     /inference="COORDINATES: protein motif:HMM:TIGR00028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEX3990277.1"
                     /translation="MILVDANLLIYSVNEAAPQHVAVRSWLDACLNGTARVGLPWPSL
                     LAFLRLTTNPRVFARPLSMADAWSQVDAWLGSDLAWVPGPTERHAEILARFLVVPGVH
                     GNLVPDAHLAALAIEHGLELNSTDGDFARFAGLRWRNPIAPRQDAS"
     gene            complement(4193..4268)
                     /locus_tag="VHX39_03790"
     tRNA            complement(4193..4268)
                     /locus_tag="VHX39_03790"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4232..4234),aa:Glu,seq:ttc)
     gene            complement(4344..6125)
                     /gene="recJ"
                     /locus_tag="VHX39_03795"
     CDS             complement(4344..6125)
                     /gene="recJ"
                     /locus_tag="VHX39_03795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008297 - single-stranded DNA
                     exodeoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEX3990278.1"
                     /translation="MIADPPGLAGCAERGLSGRRWVWRSGDDRVAFGIAQRLAVPEIV
                     GRLLAARGIGIEAAAAFLEPTLRVLLPDPSLLIDMDAAAERLADAVTSGQTVGVFGDY
                     DVDGACSAALMVSWLRALGCTVVHHVPDRMREGYGPNGPALLGLVAQGAGLIVCVDCG
                     TAAAEALSSIAGKADAIVLDHHKSEGPPPTILATVNPNRLDCSSGLTMLCAAGVAFLT
                     VVAATRTLRRRGFFQARSEPDLMALLDLVALATVCDVMPLSGVNRALVYQGLRIMARR
                     ARPGVAALLEVTQAREKLSAFTCGYALGPRINASGRIAEADLGLRLLLCEDRIEALAL
                     AERLDGINRQRQDVEAGILEAAMYAASVQAEAGSAVLVVAGEGWHPGVVGIVSGRIKE
                     RFNRPACVAGIASGIAKGSGRSVPGLDLGGAVIAARQAGILATGGGHPMAAGFSLPAE
                     RIETFRAFLNERLAAAAALPGAVDLVVDGALQVPGATIDLARHVERLAPFGAGNDEPV
                     LVLQRARVIRSDRVGRESASIRVFLEGEGGGPRLKGMLFRARDGALSEALLSRNRVPL
                     HVAGYLRVEAWNGTENPGFIISDAALA"
     gene            complement(6136..7131)
                     /gene="glpX"
                     /locus_tag="VHX39_03800"
     CDS             complement(6136..7131)
                     /gene="glpX"
                     /locus_tag="VHX39_03800"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HEX3990279.1"
                     /translation="MAAPKPNADRHTDRNLAMELVRVTEAAALAASKWIGLGKKNEAD
                     GAATEAMRKAFDTIDIAGVVVIGEGEMDEAPMLYIGEKVGSGSHPMDIAVDPLEGTTL
                     TSKGGPGAIATIALAEQGNFLHAPDIYMDKIAVGGGLPDNLINLDDPVAKNLQNLARA
                     KKCEVADLVACILDRDRHKELIAKTREAGARIMLISDGDVAGVIATTMPDSLIDIYLG
                     SGGAPEGVLAAAALRCVGGQMQGRLMYEEEAQRERVRSMGHADPNKCFTCEDMAKGDV
                     MFAATGVTPGPMLRGVKRFGGGEITHSVVMRSHSGTVRYIEAHHNFTQKTWWEAP"
     gene            complement(7266..>7641)
                     /locus_tag="VHX39_03805"
     CDS             complement(7266..>7641)
                     /locus_tag="VHX39_03805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990280.1"
                     /translation="YAGAAAMPEPDGTQRALEVHLYPEAMRGTAEGHGSYDLRPRSTM
                     TNGTVGAVPGNPGRTFTLTYQDGAKTIVVPPDTPVVTFEPGSLALLVPGAHVIVTGIE
                     ASDGSLSATRILVGKNGLVPPM"
BASE COUNT         1452 a         2484 c         2312 g         1393 t
ORIGIN      
        1 cggcgtgcac cgtcgcctct cctcgtgttc aaatcgccag aagcggccag ctcccgggcg
       61 caagatggcc caaccttgtt ccgttccctc ggttgaccgg gatcaatgtt gtgaagctga
      121 gccattacta catagcccga gcagcggatg aacctcatcg ggataagcgg catgagccaa
      181 acaaaagaca aggctgatct ggacggacag attcgggcga ccaagataat gacgtcaccg
      241 gttgtcacgg tcgggcctga tgcatcgatc cccgagatcg ccaatttact gctggataaa
      301 cacatcagcg ccgtgccggt cgtgggaagc ggaggcatcc ccttgggcat cgtaagcgaa
      361 ggcgatctga tcggtcgaac cgaaccgaac cgcctggcgc gcatcgattg gtggctcaga
      421 ttaatcggcg gacgcctacc gctggatgag gttttcatta agcgtctgaa aggcgagggc
      481 cgcaccgcac gcgacgtgat gtcggcacct ctggtgacag tgagcgaaaa caccgacatc
      541 agtgaaatcg cccggctgtt cgctatccat cacatcaaaa gggtgccggt tgttcgcgat
      601 gggcaactgg ttggcattgt gagccgcgcc aatttgcttc gcatggtcgc cgccggacac
      661 ccaaacgaga aaaagcccga aactgagaga aagcgcggcg gccttctgac cagcctattt
      721 ggcgaatacc accttccggc gtgggaaacg gtcgcgggca tcaaagcgtc gatgccgtcc
      781 cccacgacgc acgagctccc tctcgctgcc gccgatttcc gcgagctcgt caaggacttt
      841 catagcggcg aagtcataca cagggacgaa gcgcatcgtc aggcatcggc gcgacggcgg
      901 gaacgcgcga aacagctgat cgacgaacat gtctttgacg acggctggcg cgaactgatt
      961 catcgcgcac gcgtcgccgc ggagaacggc gagagggaat gcatgcttct tcagttcccg
     1021 agccagctct gtattgatgg gggacgcgcg attaatgttc acgagaaagg atggtcagcc
     1081 tcgctgcgcg gcagaccggc tgaaatcttc ctgcgatggg aacgggaact gaagtcgcgc
     1141 ggatttttac tttccgcccg cattatcacg tatccggaag gcaagccggg ggatatcggc
     1201 cttttcctgg tctgggctga tgagtagcaa acgtgccccc accatccgac gccgcgactg
     1261 gccttgcgat ccatggcgga acaaagccga cccatttact cttgataagc tatttaatcg
     1321 agagttcggc gatggcgttc caggtgacat tgccgcgggg gctatcggct tttccatggg
     1381 acgcccggca cgcggacgcg ccgaaatcga cccaaggccg tcaggccgga tcgggccaga
     1441 cccggccaag cgcccaatgt ccgatagccc gtgttcgcga ccatgcggaa aatcaggacg
     1501 ggctcgcctc gatgatgtcc ccgaacaaga cccaggtctt gccgtcccac ttctccagcc
     1561 tcatcgcctt gagcggacgg tgatcggtgt ggctggtgct tgccttgatg ccgggcagca
     1621 ctgtcggcag ttccaggtca tgcaaattct ccgcttgttt cataatattc tcgcgggaga
     1681 agtcgccgtt gcactgcttc agcacctgta acatcgccgt cgctgcggcg tagccataga
     1741 cgtagttgtt gtcggtcaga tcggctcccg gcatgtattt ggccatgaac gcgcgccatt
     1801 gcttgttgcc ggggtcattg tcccattgat ggtccgtcgg atcctttaaa tagccggtgc
     1861 tgatgaggcc gacagctttg tccactccgg ctggcgcgat caccgacccg accgaaatcg
     1921 aaacgttgct catgaggaac atcggcttcc aacccaaatc cgcgactttc ctgatcgcct
     1981 gggccgccgg cttgggcgcg gcggcggcca gcagcacatt gactccggat gcctgcagcg
     2041 aaacgatctg gctgtcgatc gtggcatcgg tcggctcgta gcttacctcg gttaccatct
     2101 tggcatagcg ctcgccgagc acctccttca tgccggccag atagtccttt ccgaaatcat
     2161 cattctgata aaggatgccg atcttcgcgt ccggcttctc cttcaggatg tacttcgcgt
     2221 agatctgtgc ttcggtcctg tagtcgggct ggaaaccggt ggtccagggg tactgcttgt
     2281 agtcgcccca cttcgccgcg ccggtggcga cgaacagatg cggcacgttc ttctggttca
     2341 cataccgcac gatagccgag ttggtcggcg tacccagtgt ctggaacaga aacgcgacct
     2401 gatcttcctc gatgaggcgc cgcacctgct ccagggtttt cggcggactg tagccgtcgt
     2461 catacgaaat gaaattgatt ttgtggccgg cgacgccccc ctggtcgttc accattccaa
     2521 agaacgcggc ttcgaccttg ccgatggcgc cataagacga cgcgggcccg ctgtagggca
     2581 tggtgttgcc gatctttatc tcattcgccg tcacgcctgg cgtatcggct gccatcgtca
     2641 cgccggccag acatgtggcg gccattaacc cggccgtcgc cgcgataaac catttcatgt
     2701 cgtttccccc caattatccg tgccgggcca attatccacc ggcggactaa tcccgccaag
     2761 atggcaggat cagcccatcg tcaccccgac caaagctgac ttgctgaata gcacccaatt
     2821 cagacctggg ggactgggtt acacaatcgg cgcgaccgct gctggacggg taatcgggca
     2881 tatcgaccgc cgtgacacta ttgacacaac gttggcagtg ccgatgggcg gacacccgac
     2941 cggtcatagg ccggcgcgtg acactgttga cactgatgac ggttcctatc tcgcacacat
     3001 gcaagccgga ggaagtgtca accgtgtcgg caatgtcatg gcagcgagag acaggaggtc
     3061 gagcgctaca aacgagcggc ggaacaggcg cgcacggcga ggcaagcggt ggagcatctt
     3121 cgcaggccac aaaccgcgaa caaaagtgtc aaaccggctg gctgaaaagt gccaaacctc
     3181 cagcaggcat ttgatttggt ttgtaagtct taagcattgg cgtgccgggt gccatgaaac
     3241 cgggcactgg gagatggtcc tgagcctctg aacatggcga gcggcgcacg ctggccgaat
     3301 gattcccgga gccggcggag aaacaacgac cgcggcgctt gtcgcgatgg cggacttgtt
     3361 tgcggacatt gtgccagaga cccgccagcg agccgccttg acatcagacc atcagcacta
     3421 atacatcatg atgcatgcgg accactctga cactggacac agacgttagc atcgagcttg
     3481 aggaactgcg gcgaaagcgg ggactcagtc tgaaggacgc cgtgaaccac gcactgcggc
     3541 gcgggctacg ggcgatggcc aacggcgaca aggccaggcc cacgtttata accaggagtg
     3601 tcgatctggg gcttccgcgt gtgccgttgg acaatgtcgc tgaagcgctg gtgacggccg
     3661 acggcgaaag cttccattga tcctggtcga tgcaaatcta ctgatctact cagtcaacga
     3721 agccgcgccc cagcatgtcg ccgtgcggtc atggctcgat gcgtgcttga acggaacagc
     3781 gcgagtgggt ctgccctggc catctctgct ggccttcctt cggctgacca ccaacccgcg
     3841 ggtcttcgcg cgcccgctca gtatggcgga tgcctggagc caggtagatg cctggctggg
     3901 aagtgatctg gcctgggttc ctgggccgac tgaacgccac gccgaaatcc tggctcgatt
     3961 tcttgtggtt cccggagtgc acggtaatct ggttccggat gctcacctcg cggcattggc
     4021 gatcgagcac gggctggaac tcaactccac tgacggcgac ttcgcgcgat ttgccggact
     4081 gcggtggcgc aatcccattg cacctcgtca ggacgcaagc tgacagtacg catccgcccg
     4141 tgagattgac actgtcacag gcgaacggtg atcggttgca attgtcggat catggcgtcc
     4201 cgtaggggat tcgaacccct gttaccgccg tgaaagggcg gtgtcctggg cctctagacg
     4261 aacgggacca cgcgctctcg atcagggccg gcggtgggta gcggaccctc ccgccccggt
     4321 caagccaacg ctacaagccc gcctcaggcc agggcggcgt cggagatgat gaaacccggg
     4381 ttctccgtgc cgttccaggc ctccacccgc agatacccgg ccacatgcag gggcacccgg
     4441 ttccggctca acagagcctc gctcagcgcc ccatcgcgtg cccggaacag catgcccttc
     4501 aaccgaggcc caccgccctc accctccaga aacacccgaa ttgacgccga ctctcgcccc
     4561 acgcgatccg accggatcac acgggcacgc tgcagcacca gcacaggctc atcattcccg
     4621 gcaccaaacg gcgccaaccg ctcgacatgg cgcgcgaggt cgattgtcgc accggggacc
     4681 tggagagcgc cgtcgaccac cagatccacc gcgcccggca aggccgccgc tgctgccagc
     4741 cgctcgttca ggaacgcccg aaacgtctcg atccgctccg ccggtaagga aaatcccgcg
     4801 gccatgggat gtccccctcc agtcgccagg atacctgcct ggcgcgctgc gatcactgcc
     4861 ccgcccagat ccagcccagg aaccgagcgg ccggagcctt tggcgatgcc tgaggcgatc
     4921 ccggccacac aggccggccg attgaaccgt tccttaatgc gtcccgagac aatgccgacc
     4981 acgccgggat gccagccctc gccggccacc accagcaccg cgctgccggc ctcggcctga
     5041 accgaggcgg cgtacatggc ggcttccagt atcccggcct caacgtcctg acgttggcga
     5101 ttgatgccgt ccagccgctc ggccagcgcc aatgcctcga tgcgatcctc gcacaacaga
     5161 agccgcaacc ccaggtcggc ctcggcaatc cgtccggacg cgttgatgcg cgggccaagc
     5221 gcgtagccgc aggtgaacgc cgatagtttc tcgcgtgcct gggtcacctc gagtaacgcg
     5281 gcaacaccgg gccgcgcccg ccgggccatg atccgaagcc cctggtaaac cagcgcgcgg
     5341 ttcaccccgc tcaacggcat gacatcgcaa accgtcgcca gcgccacgag gtcgagcagt
     5401 gccatcaaat ctggctcgga acgcgcctgg aagaacccac gccgacgcaa ggtgcgagtt
     5461 gccgccacca cggtcaggaa cgccactcct gcggcacaca gcatcgtcag gcctgagctg
     5521 caatccagcc ggttcggatt gaccgtggcc aaaattgttg gtggcgggcc ctcggattta
     5581 tggtggtcca gcacaatcgc gtcggccttg ccggcgatgc tcgacagtgc ctccgccgcg
     5641 gcggtcccac agtcgacgca aacgatcagc ccggcaccct gcgccaccag gcccagtagg
     5701 gcggggccgt ttggaccgta accctcgcgc atgcggtccg gcacatgatg caccacggtg
     5761 caccccaatg cgcgcagcca gctgaccatc aacgcggcac tgcatgcgcc gtcaacgtcg
     5821 taatcgccga atacacccac tgtctgacct gacgtcacag catcggcgag ccgttctgcc
     5881 gccgcatcca tatcgatcag caacgaggga tcgggcagca gtacgcgcaa agtgggttcc
     5941 aggaaggcgg ccgccgcctc gatcccgatg ccgcgcgcgg ccagcagacg gccaacgatc
     6001 tcgggcaccg caaggcgttg ggcgatcccg aacgcgaccc ggtcatcgcc ggagcgccag
     6061 acccagcgcc gcccgctcag gccacgttcg gcgcagccgg caagccctgg gggatcggcg
     6121 atcaagccgg ggtccctacg gcgcctccca ccaggtcttc tgggtgaagt tgtgatgcgc
     6181 ctcgatataa cggaccgtgc cggagtggct gcgcatgact accgaatggg tgatctcgcc
     6241 gccgccgaac cgctttacgc cgcgcagcat cggaccgggc gtgacaccgg tcgcggcgaa
     6301 catgacatcg cctttggcca tatcctcgca ggtaaaacac ttgttcggat cggcatgccc
     6361 catcgagcgg acccgttccc tctgggcttc ctcctcgtac atcagccgtc cctgcatttg
     6421 cccgccgacg cagcgcaacg ccgccgccgc cagcacgccc tcaggagcgc cgccggaacc
     6481 gagatagatg tcgatcagcg agtccggcat cgtggttgcg atcacgccgg ccacgtcacc
     6541 gtcgctgatc agcatgatgc gcgcgccggc ctcacgggtc ttggcgatca gttccttgtg
     6601 acggtcgcga tccaggatac aggcgaccag atcggcaacc tcgcatttct ttgcccgcgc
     6661 gaggttctgc aggtttttcg ccactggatc gtcgaggttg atcaggttgt cgggaagccc
     6721 cccgccgact gcaatcttgt ccatgtagat gtcgggcgca tggaggaaat taccctgttc
     6781 ggccagtgcg atggtggcga tcgcgccggg tccgcctttc gaggtcagtg tcgtgccctc
     6841 cagtggatcg acggcgatgt ccatcgggtg gctgccggaa ccgaccttct cgccgatgta
     6901 aagcatcggc gcttcatcca tctcaccctc gccgatgacg acgacgccgg cgatgtcgat
     6961 ggtatcgaac gctttgcgca tcgcctcggt cgcggcgccg tcggcttcgt tcttcttgcc
     7021 gaggccgatc cacttggaag cggccagggc ggcggcctcg gtgacgcgga ccaactccat
     7081 cgcgaggttg cggtcggtat ggcggtctgc gttcggcttc ggtgcggcca tggtggtttc
     7141 ctcctgtcac gcgagtctgg ggggaacctg gcacgagacg ggggaaaagt ctcggatttg
     7201 tgttggattg gtcggcggcc gagaaatacc aggccactcg gttggtatgc tcacctggcg
     7261 cgtcattaca tcggcggcac caacccgttc tttccaacca aaatccgcgt cgccgagagg
     7321 ctaccgtcgc tcgcctcgat cccggtcacg atcacgtgcg ctcccggcac cagcagggcg
     7381 agtgaacccg gctcgaacgt caccaccggc gtgtcaggtg gcacgacgat ggtcttcgct
     7441 ccatcctgat aggtcagcgt gaacgtgcgc ccagggttgc cgggcaccgc gcccacggtg
     7501 ccattcgtca tcgtgctgcg cggcctgagg tcgtacgacc catgaccctc ggcggtgccg
     7561 cgcatggcct cgggatacag gtgcacctcg agtgcgcgtt gggtcccatc cggctccggc
     7621 atcgcagcgg cgccggcata c
//
LOCUS       DATAVD010000209         2449 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_577484, whole genome shotgun sequence.
ACCESSION   DATAVD010000209 DATAVD010000000
VERSION     DATAVD010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_577484"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(161..1222)
                     /locus_tag="VHX39_03810"
     CDS             complement(161..1222)
                     /locus_tag="VHX39_03810"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3990281.1"
                     /translation="MRNGLARRRLLGTAAALPLVFIRGARAATRSIQIGIYTAQQGEY
                     VRKQIIPKFETDNDCKVFTTEGVTLMQIAALRATRDNPKYSVMFMDDIGIELSKREGL
                     IDQLPADKIPNLAGLLPRFSFYDGFGAAFAISTGGMVYNPQVTKPLVSYADLWEPRFK
                     QRFLMMTPKATQSLYLLIATASFMTGKPLKEAQYEIDTVWPKMAELKTNVLSTYDSSS
                     QIMMVAQGQVDVAGIEYSKSIYPYTIQGAPMDMCFPKEGTFAGINCLSFVKGGPEPEL
                     AAAFINRMLDPAVQQGLATATLTSPSVNGATFPPEIGKYIAYPEAKMDAMGLFAADWA
                     YINPRRAGWLEKYNQVFGS"
     gene            complement(1238..2032)
                     /locus_tag="VHX39_03815"
     CDS             complement(1238..2032)
                     /locus_tag="VHX39_03815"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3990282.1"
                     /translation="MNSRGMAWVLYPLTASVMIFVLAPLLIVMAMSFSGGAFATFPPR
                     GFTLSWYANVLSDRDFRASLGFSALLATCATMGALAFGLPAAFALTRCALPGREALRV
                     MLLSPLIFPVLVVGVALLRLLSDWHSNSAPVNLLIGHILVTTPYVVRTVTASLLLADV
                     SLEEAARTLGAGVWRVFRRVTLPQIAPGVAAGTLFAFMVSFDNYPISMWLADAQYVPM
                     PMLIYRQVASVFTPAVPATSTLMILFAFAMVLVMERLTGLRRAMAL"
     gene            complement(2029..>2449)
                     /locus_tag="VHX39_03820"
     CDS             complement(2029..>2449)
                     /locus_tag="VHX39_03820"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3990283.1"
                     /translation="RLLYSETAVVIGSLHVFLPMMVLPLASALGRIDRNLEEAARTLG
                     MPVWRVFHRVTLPLSLPGLAVGLTLVFSLTAGSFVTPAMLGGTNAQMLGNLIDQQITA
                     IYDWPFGATIATVLVVIVISVNLISMRLLDRGRRAAA"
BASE COUNT          553 a          746 c          721 g          429 t
ORIGIN      
        1 cccagcagag ccagcatgct gcctggctcg accgtcaggg acagcgcatc gaccgcccgt
       61 tgtgcaccgt aatgcttgct gagttcgtgc agccggaccg tggtcgaccg cgtcttcagc
      121 gtgggtgcaa acaccggagg aacgtcttcg gtgtccacag tcagctcccg aacacctgat
      181 tatatttctc cagccagccc gctcgccttg ggttgatata agcccagtcg gcggcgaaca
      241 gacccatcgc gtccattttc gcctcgggat aggcgatgta cttgccgatc tcgggaggaa
      301 aggtcgcgcc gttgacggac ggtgaggtca acgtcgctgt cgccaggccc tgctgcaccg
      361 cagggtccaa catgcggttg atgaatgccg ccgccaactc cggttccggt ccacccttga
      421 cgaagctgag gcagttgatg ccggcaaacg tgccttcctt cgggaagcac atgtccatcg
      481 gcgctccctg gatggtgtat ggatagatgc tcttggaata ctcgatgccg gcaacatcca
      541 cctgcccctg cgccaccatc atgatctgcg aggaactgtc ataggtgctc aacacgttgg
      601 tcttcagttc ggccatcttt ggccagaccg tatcgatctc gtactgggct tccttcaatg
      661 gtttgccagt catgaaactt gctgtggcga tcagcaaata caggctctga gttgcctttg
      721 gcgtcatcat caggaaacgt tgcttaaatc gcggctccca taggtcggca tacgacacca
      781 gcggttttgt cacctgcggg ttgtaaacca tgccgccggt ggaaatggcg aatgcagcgc
      841 caaaaccatc atagaagctg aaccgcggca gcaaaccggc caggttgggt atcttatcgg
      901 ctggcaattg atcgatcagg ccttcgcgct ttgacagctc gatgccgata tcgtccatga
      961 acatcacgct gtatttggga ttgtcccgcg ttgcacgcag cgcggcgatc tgcatcaagg
     1021 tcacgccctc ggtggtaaat accttgcagt cgttatcggt ttcgaatttc ggaatgatct
     1081 gcttgcggac atattcgccc tgctgcgcgg tatagattcc gatctggatc gagcgcgtcg
     1141 cggcgcgggc cccacggatg aagaccaaag gcaacgcagc cgccgtgccc aacaagcggc
     1201 gcctagcaag accatttcgc atgcacaaat ctccttatta aagggccatg gcgcgtcgca
     1261 ggccggtcag ccgctccatg accagcacca tcgcaaacgc aaacaggatc atcagggtcg
     1321 aggtggccgg caccgcaggc gtgaacacgc tcgccacctg gcggtagatc agcatcggca
     1381 ttggcacgta ctgggcgtcg gccaaccaca tcgaaatggg atagttatcg aatgacacca
     1441 tgaacgcgaa caacgtccca gcggcgactc ccggcgcgat ttgcggcaac gtgacgcggc
     1501 gaaacacgcg ccagacgccg gcgccgaggg tccgagcggc ttcctccagc gatacgtcgg
     1561 ccagcagcag gctcgcggtc accgttcgca ccacgtaggg cgtggtcacc agaatatgac
     1621 cgatcaacag attcaccggt gcgctgttgg aatgccagtc ggacaacagg cgcaacagag
     1681 cgacgccgac aaccagtacg ggaaagatca gaggcgacag cagcatgacc cgcagcgcct
     1741 cgcgaccagg cagcgcacat cttgtcagcg cgaaagcggc cggcaggcca aacgccaggg
     1801 cacccatggt tgcgcaggtg gccaacaacg cgctgaagcc gagcgaggct cgaaaatcgc
     1861 gatcgctcaa tacgttggca taccaggaca aggtaaaccc acgcggggga aatgttgcga
     1921 atgctccgcc ggagaatgac atcgccataa cgatcagcaa cggcgccagc acgaaaatca
     1981 tcactgaagc ggtgagcgga tacagcaccc acgccatgcc tcgcgagttc atgctgccgc
     2041 acgccggccg cgatcgagca accgcatcga tatgagattg acgctgatca cgatgacgac
     2101 cagcacagtg gcaatcgtcg cgccgaacgg ccagtcgtaa atggcggtga tctgctgatc
     2161 gatcagattg cccagcatct gggcgttggt gccgccgagc atggcagggg tgacgaagga
     2221 gccggcggtc agcgaaaaca ccagagtcaa gccaaccgcc agaccaggca gactgagcgg
     2281 cagggtcaca cgatggaaca cgcgccagac cggcatgccg agcgtgcgtg cggcttcctc
     2341 cagattgcgg tcgatgcgac ccagagcaga ggcgagcggc agcaccatca tcggcaaaaa
     2401 cacatggagt gaaccgatga caaccgcagt ttccgagtac agcaaccgc
//
LOCUS       DATAVD010000210         7456 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2253021, whole genome shotgun sequence.
ACCESSION   DATAVD010000210 DATAVD010000000
VERSION     DATAVD010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7456
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2253021"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2254
                     /locus_tag="VHX39_03825"
     CDS             <1..2254
                     /locus_tag="VHX39_03825"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3990284.1"
                     /translation="ELQTGFQHELRRIRTEEAAARDSAAWRYQNSMSWRITAPLRAAA
                     LVLRGRGFGVRPPGLPAAQPMLTPATGPMTTSGMDHRGAMRAVLANRLNAFLAGSGTL
                     ALPRASEVETSIVLVLHNQAELTFGCLSSIAECLGSQSGVEVVILDNASTDATDSLLG
                     RVTGARSIFSRENLHFLRGVNLAVREARGRNILLLNNDAQVLPGTLEAAIRALRSGPN
                     IGAVGGRLVLPDGTLQEAGSILWQDGTATGYGRGHAPSEPEFDFRRDVDFCSGAFLLT
                     PREVFERLGGFDERYAPAYYEETDYCVRLHEAGLRVIYDPDVVVMHYEFGSSAGSAAA
                     LALQQRNHAVFLGRHAEWLAQRPARGRMLAGRSRPRGPRVLVLDDRVPHVRLGSGYPR
                     TRDMLHELNAAGAEVTFFPMVPYRETRTQVRETLDIEIEVMLGHHNRMLRGFLEERRG
                     HYDGIVVCRPHNMRDFRNAIGNDRTRIGGAVLIYDAEAIFAFREILQRRVAGNPVPER
                     TAQKMVADEVALIGDVDAVAAVSKREAAVFEAQGVNSVRVLGYPIVPDPGTTPFAARE
                     GFIFLGAVPGDESPNADSLRWFAAEVLPLLRREFGDGLRLRVVGQCDAPSIRALDGEA
                     LDLLGPIDDLRPIFEQARVMVAPTRFAAGIPLKMHQAAAFGVPVVSTTLIAELAGWRD
                     GHDLLAASDASGFAEACARLHRDETLWTAIRNSALDRCATDCSPAAFRQSVGVILDMI
                     AARSHAARTP"
     gene            2235..4601
                     /locus_tag="VHX39_03830"
     CDS             2235..4601
                     /locus_tag="VHX39_03830"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3990285.1"
                     /translation="MQQEPPDHMGDALELVPLHDLQQNGDGWIATGDDPYFLLRPRSG
                     RQPGGWSRLKFKLESEAVQLSPVLYVDDGTGFSETGARRISVFEAAGPGVLLRLPNKV
                     RALRLDPLSMRGCFRIDGVRIEHVGRAYAVLQRMAPVVSRLARNPGMARRYAAAAVHV
                     ARRSGWRGLLRYALRDRYTINERYADWVRAFDTLDATDRAAIAARIASMGNKPTISVI
                     VPLYNTPERMLRCCIDSVLSQLWPHWELCLADDASTAPHVQTICEQYARRDKRIRFTR
                     REANGHIAAASNTALGLARGEFVALLDHDDELAPHALYMVAEALNERPDLDLIFSDED
                     KIDEMGSRREPWFKSDWNYDLMLAQNAVVHLAVFRRRLIEEVGGFRSGFDGSQDYDLT
                     LRVAERTTPERIHHIPFILYHWRAILGSVALAVGEKKYPYVAAVRAIEEHLDRTGRIG
                     TRVERQVHPGYYRIHWPLPPDPPRVAIIIPTRDKVELLRVAVSSILKRTDYPAIEIII
                     VDNGSVEDQTLRYLQDLATIRCVRVLRYNQPYNFAALNNWAVAQTDAPLVGFLNNDVE
                     VITPNWLSEMAAQSLRPEVGAIGCKLYYPNGTIQHAGIVVGIGGRAGHPHLGLQRGAP
                     GYFGRAACTQRFSAVTAACMVMRREVFLRVGGFNERDFAIAFNDVDLGLRLNRAGLAV
                     VWTPHAELFHHESASLGAATSDRRQQQFELECANLVRCWPEAIKNDPFYNPNLTLDGG
                     DWSVAIPPRVRRPWQSFQAGTVPSPETVMQRSFETAGAPRLDETSGSP"
     gene            complement(4635..5585)
                     /locus_tag="VHX39_03835"
     CDS             complement(4635..5585)
                     /locus_tag="VHX39_03835"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX3990286.1"
                     /translation="MQTKKRTLRDINCLVLGGGGFIGTHLCQALLREGAQVRGFGRSR
                     TDAAALAGVVWTSGEFADRTALARAVEGCEVVFHLLGGSIPDSSNRDPLGDLLSSVVP
                     ALQLLEICRASLVRKVLFISSGGTVYGIPRAIPIPESASTEPISAYGISKLAIEKYLA
                     LYHHLYSCDFSVLRVANAFGPYQSPHRRQGLIAAFMHRIARGQPVEIWGDGGVVRDFI
                     YIADVIDAVLLAATYDGPHHVFNVGSGVGRSVLEVVTDIADVLGCPKIVPIHKSGRAT
                     DVPVNVLDIALIHRELGWSARTVWSDGLRLTADWIRTLQD"
     gene            5831..6808
                     /locus_tag="VHX39_03840"
     CDS             5831..6808
                     /locus_tag="VHX39_03840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990287.1"
                     /translation="MLLPRRLLLSATLPAVIAPLRAETLSKVRVGVLRFGTVSWELDV
                     MRHRALDTAEHIAVEPVELAAAQAAQVALQAGDVDVIVADWLFVARQRGAGADWTFVP
                     FSNAVGALITPADSPVHNVPDLVGHSLGVAGSPLDKSWLILRAYATQRYGIDLSAKTT
                     PSFGPPPLLAEQMKAGRLDALLTFWPFAAKAEAAGARRILAVEDAVSAMGIAVGVPYI
                     GYIFAHHWAQQNPALINGFIAASGAARAILASSDDEWQRIKPLTGAANDAELEHLRDW
                     YRRGMPTHWGAPERQAASRLFALMAKLGGSELVGPISEVPAGTFWPVTW"
     gene            6805..>7456
                     /locus_tag="VHX39_03845"
     CDS             6805..>7456
                     /locus_tag="VHX39_03845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX3990288.1"
                     /translation="MTNRLAFRFDSELLVRIAAAAAFLLVWQIGAGVAHSRLLPSFTA
                     VLTAMIGETESGTLPWNLAITLARVAAAFTVSLLLGGALGIAMGRWRRFDLLLDGAVT
                     VLLNLPALVIIVLIYVWFGLTETAAISAVALNKLPSTTVTLREGARALDPLLAEMAES
                     FRMPRWRVLRHVILPQLVPYIFAAARSGLALIWKIVLVVELLGRSNGVGFQIQIYFQ"
BASE COUNT         1362 a         2287 c         2282 g         1525 t
ORIGIN      
        1 ggagttgcag acggggtttc agcacgagct acgccgcatc cgcaccgagg aagcggcggc
       61 acgggactcc gccgcctggc gttaccaaaa ctcgatgtcc tggcgtataa cagcgccatt
      121 gcgtgcggca gcgttggtgc tacgggggcg gggcttcggg gtccgaccac ccggcttgcc
      181 tgcggcgcag cccatgctga cgccagcaac tgggccgatg acgaccagcg ggatggacca
      241 ccgtggtgcg atgcgtgcag tgcttgccaa tcgcctcaac gcgtttctcg ccggcagcgg
      301 gacccttgcc ctgccgcgag cctcggaagt agagaccagt attgttcttg tacttcataa
      361 tcaggccgaa ctgacctttg gctgcctgtc ctccattgca gaatgcctcg ggtcgcaaag
      421 tggtgtcgag gtcgtaatcc tggacaatgc ctcgacagat gcgacggaca gtctgctcgg
      481 gcgcgtcacc ggtgcgcggt cgatattcag ccgggaaaac ctgcactttc tgcgtggcgt
      541 taatctggca gtgcgcgagg cccgcggacg gaacatcctg ctgcttaaca atgatgcgca
      601 ggttctgccg ggtacactcg aggctgccat ccgcgcgctc cgctccggcc ccaatattgg
      661 tgccgtcggc gggcgccttg tcttacccga cggaacgttg caggaggcgg ggtcaatcct
      721 gtggcaggat ggcaccgcca caggctacgg ccgcggccac gcaccgagcg aacctgaatt
      781 cgacttccgc cgggacgttg acttctgctc aggcgccttc ctgctcacac cccgcgaggt
      841 attcgagcgt cttggcggtt tcgacgaacg ttacgctccc gcctattacg aagaaactga
      901 ttactgcgtt cggttgcacg aggccggcct tcgcgtcatc tacgaccctg atgttgttgt
      961 catgcactac gaatttggca gctcggcagg ctcggctgcc gcacttgcgc tgcaacagcg
     1021 caatcatgct gtgttcctcg gtcgtcatgc ggaatggctc gcacagagac ccgcgcgagg
     1081 ccggatgctc gccggccgtt cacgaccgag agggccgcgg gtgctggtat tggatgaccg
     1141 cgtacctcat gttcggctcg gctcggggta tccgcggacg cgcgatatgc tccacgaact
     1201 taatgccgcg ggggccgaag taacgttttt tccaatggtg ccctaccggg aaacccgtac
     1261 gcaggtacga gagaccctcg acatcgaaat tgaggtgatg ctcggccacc acaaccgcat
     1321 gctccgcggc ttccttgaag agcggcgggg ccattacgac ggtattgtgg tatgccgccc
     1381 gcataacatg cgcgattttc gcaacgcgat tggtaatgat cgaacacgca ttggcggcgc
     1441 cgtgctaatc tacgacgccg aggccatctt cgcattccgc gaaatcttgc agcgccgcgt
     1501 cgccgggaat cctgttccgg aacggaccgc ccaaaaaatg gtggccgacg aggtcgcgtt
     1561 gatcggcgac gtggacgcgg tggcggcggt ctccaaacgc gaagcggcag tttttgaagc
     1621 acagggtgta aactccgtgc gagtgctcgg ttatcccatc gtgccggatc ccggaacgac
     1681 gcccttcgct gcgcgggagg gcttcatctt tctcggcgca gtgccaggtg acgagtcgcc
     1741 aaatgccgac agtctgcgct ggtttgcggc cgaagtgctg ccgcttctac gccgtgaatt
     1801 cggtgacgga ctccgcctcc gggtcgtcgg ccaatgtgac gcaccatcga tccgcgctct
     1861 cgatggcgag gcgctggatt tgctcggacc gatcgacgac ctccgcccga tcttcgagca
     1921 ggcccgcgtc atggtggcgc cgacccgctt tgccgccggc attcccctca aaatgcatca
     1981 ggcggcggcg tttggtgtgc cggtggtatc aaccacgctg attgcggaac tggccggctg
     2041 gcgggatggg catgacctcc tcgcggcctc tgacgccagc ggttttgctg aggcctgcgc
     2101 tcgcctgcat cgcgacgaga cactttggac ggcgatcaga aacagcgcac tcgaccgctg
     2161 cgcgaccgac tgttcgcctg cagcattccg gcaaagtgtt ggcgtcatac tcgacatgat
     2221 cgctgcgcgg agccatgcag caagaacccc ctgaccacat gggcgacgcc cttgaactcg
     2281 ttccgctgca cgatctacag cagaatgggg acggttggat tgcgaccggt gatgacccgt
     2341 atttcctgct gcgcccacgc tccggccggc aacctggagg ctggagtcgg cttaaattta
     2401 aactggaaag tgaagctgtt cagcttagcc cagtactcta tgtggacgac ggcaccggct
     2461 tctccgagac cggagcgaga cgcatctcgg tgtttgaggc cgcaggaccc ggcgtgctgc
     2521 tgcgcttgcc caacaaggtc cgggcgctcc ggctcgatcc gctgagcatg cgtgggtgct
     2581 tccgaattga tggtgttcgg atcgaacatg tcggccgcgc ctacgccgtg ctgcaacgca
     2641 tggctccggt tgtatcgcgc cttgcccgca atcccggaat ggcacgccgc tatgccgcgg
     2701 ctgctgtgca tgtcgcgcgc cgatcgggtt ggcgcgggtt actgcgttac gcgctgcgtg
     2761 accgttacac tattaatgag cgctatgccg actgggtccg cgccttcgac acgttggatg
     2821 ccaccgatcg cgccgccatt gccgctcgta tcgccagtat gggcaacaag ccgacgatct
     2881 ccgttattgt gccgctttac aacacgccgg aacggatgtt gcggtgctgc atcgactcgg
     2941 ttctctccca actctggcct cactgggaac tctgcctcgc cgatgatgct tcgaccgcac
     3001 cccatgtgca aactatctgt gagcaatatg cgcgccgcga taagcgcatt cgtttcacgc
     3061 ggcgggaggc gaacgggcat atcgctgctg cgtccaacac cgctctcggc ctggcgcgcg
     3121 gcgagttcgt tgcattgctc gatcatgacg acgaattggc accccatgcg ctctacatgg
     3181 tggctgaggc gctaaacgag cgtcccgacc tggatttgat tttctccgac gaggacaaaa
     3241 tcgacgagat gggttcacgc cgagagccat ggttcaagtc tgactggaat tacgacctga
     3301 tgctggcgca gaatgcggtc gtccacctgg ctgtattccg ccgccgcctg atcgaggagg
     3361 ttggcggctt ccgtagcggc ttcgacggta gccaggacta cgatctgacg cttcgcgttg
     3421 cggaacgcac gacacctgaa cgcatccacc atattccctt catcctttat cactggcgtg
     3481 caattctggg gtctgtcgca ttggccgtcg gcgagaagaa atatccctac gtggctgcgg
     3541 tacgtgccat cgaggaacat ctcgaccgca cgggtcgaat tggcacgcgc gtggagcgtc
     3601 aggttcaccc cggatattac cgcattcatt ggccgctgcc gcccgacccg ccgcgcgtgg
     3661 caatcatcat cccgacccgt gacaaagtgg agttgcttcg ggtcgccgtt agctcgatcc
     3721 ttaagcggac cgactacccg gcaattgaaa tcatcatcgt cgacaatggc agcgttgagg
     3781 atcaaacgct gcggtacctg caagaccttg ccacaattcg ttgcgttcgc gtgttgcgtt
     3841 acaaccagcc ctacaacttt gccgcattga acaactgggc tgtggcgcag accgatgcgc
     3901 ctctggttgg gtttcttaac aatgatgttg aagtgatcac gcccaactgg ctgtcggaga
     3961 tggccgccca gtcgctgcgc ccggaggtcg gtgcgattgg ctgcaaattg tattatccga
     4021 atgggacgat tcaacatgcc ggaattgtcg tcgggatcgg cggacgcgcg ggacatccgc
     4081 atctgggcct tcagcgtgga gcgccggggt atttcggccg cgccgcttgt acgcagcgtt
     4141 tctcggccgt tacagcggcc tgcatggtga tgcgtcgcga ggtgtttctt cgcgtcggcg
     4201 gcttcaatga gcgcgacttc gcgattgcct tcaacgatgt ggatcttggc ttacggctta
     4261 atcgtgccgg cctcgcagtg gtctggacac cgcatgccga actctttcat cacgaaagtg
     4321 cgagtctcgg tgcggcaacc agcgatcggc gccaacagca gttcgaactg gaatgtgcca
     4381 atcttgttcg ttgctggccg gaggccatca aaaatgaccc tttctacaac ccgaacctga
     4441 cgctcgacgg gggcgactgg agcgtcgcca ttccgccgcg tgtaagaagg ccttggcaga
     4501 gtttccaggc cggcacagtt ccttctccgg aaaccgtgat gcagcgatct ttcgaaacag
     4561 cgggagcgcc ccggttggac gagacatcgg gatcgccctg agatttccga caccggagct
     4621 cgccagtccg ctgatcaatc ctgaagggtg cggatccagt ccgcggtcag ccgcagcccg
     4681 tccgaccaga cggtacgggc agaccaacca agctcacgat gtatcaaggc gatgtccaga
     4741 acgttgactg gtacgtcagt tgcacgcccg gatttgtgga tcggcacaat cttagggcag
     4801 cccagtacgt cagcgatgtc ggtcacgact tccagcacgc tgcgaccaac gccgctgcca
     4861 acattgaaca catgatgcgg gccatcatac gtggccgcca gcagcacggc gtcgatgaca
     4921 tcggcgatat agatgaagtc gcgaacgact cctccatctc cccagatctc aaccggttgt
     4981 ccccgcgcaa ttcggtgcat gaaggcggcg atgaggccct gtcggcgatg cgggctctgg
     5041 tacggaccaa acgcgttggc gacccgcaaa acgctgaagt cgcaactgta gagatgatga
     5101 tacagagcta aatatttctc gattgccagt ttactgatcc cgtaggcgga aattggttcg
     5161 gtggacgcgc tctccggaat cggaatagcg cgtggaatac cgtagactgt gccgcccgat
     5221 gaaatgaaca gaaccttgcg caccaatgaa gcgcggcaga tttccagcaa ttgcagcgcc
     5281 ggcaccacgg aactgagtaa atcgccaagc gggtctctgt tcgaactgtc cgggatgctg
     5341 ccgccgagca ggtggaacac cacctcgcag ccctccacgg cgcgggcaag cgcggtccgg
     5401 tcggcgaatt cgccgctggt ccacacgacg ccggccaaag ccgcagcatc cgtccggcta
     5461 cgcccaaagc cacgcacctg ggctccctcg cggagcaagg cctggcacag gtgggtccca
     5521 atgaagccgc cgccaccaag cacgaggcag ttaatgtcgc gcaaggtccg ttttttggtc
     5581 tgcatgcgtt ataacctgct gaagccagcg atatcagccg cctgattctc tgatcgcagt
     5641 tcgatggcgg catctatggc aacgccacga atacaggtcg ccagcaggac gatcaaggtc
     5701 ggtaaagcat gctcggatgc tccaatcgtg ttaaagcagg agatttgcaa ccgccggcca
     5761 attcgcccgg ccattgacat cgaatgccgc cgtgagggga taatcgcaga aagtacagga
     5821 gagaaacctt atgcttttgc cgcggcgcct gcttctgagc gcgacgcttc ccgccgtcat
     5881 cgcgccactg cgcgccgaaa cgctgtcgaa ggtccgcgtt ggcgtgctgc gcttcggcac
     5941 ggtgtcgtgg gaactcgacg tgatgcggca ccgagcactg gacaccgccg agcatatcgc
     6001 cgtcgaaccg gtcgaacttg ccgcggcgca agctgcgcag gtggcactgc aggccggcga
     6061 tgttgacgtc atcgtggcgg attggttgtt cgtggctcgt cagcgcggcg ccggcgcgga
     6121 ctggacgttt gttccatttt ccaatgcggt gggcgcgctg atcactccag cggattcgcc
     6181 cgtgcacaac gtgcccgatc tggtcggtca tagtctgggg gtcgccggca gtccgctcga
     6241 caaaagctgg ctcattctgc gggcttacgc gactcaacgc tatggcatcg atcttagtgc
     6301 caaaacgacg ccatcattcg gaccaccacc gctattggcg gaacagatga aagccgggcg
     6361 cctcgatgcg ttgctgacct tttggccctt tgctgcaaag gccgaggccg ccggcgcgcg
     6421 ccgcattctg gccgtggaag atgctgtctc cgcgatgggt attgccgtcg gcgtacccta
     6481 tatcggctac atcttcgcgc accattgggc ccagcaaaac ccggctctca tcaacggatt
     6541 tattgcagcc tccggcgcag cgcgggccat cctggcgtcg tcggatgacg aatggcaaag
     6601 gataaaacct ctgacaggcg ccgcaaacga tgctgaattg gaacatctgc gcgactggta
     6661 ccgccgtggc atgccgactc attggggtgc gccggaacgc caggccgcgt cccgcttgtt
     6721 tgcgctgatg gcgaagctcg gcggctcaga gctggtcggt ccgatcagcg aggtgcccgc
     6781 gggaaccttc tggccggtca cctggtgacc aaccgcctgg ccttccgttt cgatagtgaa
     6841 ttgctcgtgc ggatcgctgc cgccgcggcg ttcttgctgg tctggcagat cggagcaggc
     6901 gtggcacata gccggttgtt gccctccttc actgcagtgt taaccgccat gatcggggaa
     6961 actgaatcgg gtacgctgcc gtggaacctg gcgattacgc tggcccgcgt cgccgcggca
     7021 ttcacggtgt cgttgctgct gggtggcgcg ttaggtatcg ccatgggccg ttggcgccgg
     7081 tttgatctct tgctggacgg cgccgtcacg gtcctgctga acctgccggc actggtgatc
     7141 atcgtgctga tctatgtctg gtttggcctg accgaaaccg ctgcaatctc cgccgttgca
     7201 ctgaacaaac ttccttccac caccgtcacg ttgcgcgagg gcgcgcgtgc gctcgaccca
     7261 ctgctggccg aaatggcaga gagttttcgt atgcctcgct ggcgcgtgtt gcgtcacgtg
     7321 atcctgccac agttggttcc ctacatcttt gcggctgccc gttcgggcct cgccttgatc
     7381 tggaaaatcg tcttggtagt ggaactactg ggtcgcagca acggcgtcgg atttcagatt
     7441 cagatctatt ttcaat
//
LOCUS       DATAVD010000211        10173 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1136000, whole genome shotgun sequence.
ACCESSION   DATAVD010000211 DATAVD010000000
VERSION     DATAVD010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10173
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1136000"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(105..866)
                     /locus_tag="VHX39_03850"
     CDS             complement(105..866)
                     /locus_tag="VHX39_03850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3990289.1"
                     /translation="MIRYDLTGRTALVTGGASGIGFATAKMLSGFGATVAVNFLTDDP
                     RGPEAVDKLIAAGGKAVMAPGSVGDATDSARMVQQAVADLGRLDLLVNNAGTPGTRHR
                     IAPPDLDLITEELWSVLLETNLLGVFRCAKAAAPALKKAGGAIVNTASIAGLGRAGSS
                     LAYGATKAGVVSLTQNLARALAPEVRVNAIAPGAVDSAWMVEWTNEERQQSIERALLK
                     RRCQPEDLAEVIVVLGFGAAMVTGQTITVDGGLTL"
     gene            complement(863..1813)
                     /locus_tag="VHX39_03855"
     CDS             complement(863..1813)
                     /locus_tag="VHX39_03855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3990290.1"
                     /translation="MAEVAVVGAGLMGHALALVFALGGHQVRLTDNNAESLERAPGLM
                     ATALATLAEASEVDGTWNRQRLSKAVRCVPSLADTVKGASLVVEAVVERPDVKLALYE
                     QLQSLMEPDAILASNTSNLDIFPLVPAAMQERTVIAHWYTPPYLCDLVDLCPGPGTKP
                     GVIEIVRDMVAAMGKAPVVFKQMVQGYIANRLQAAMQLEVYRLLDEGLVTPKDIDDSV
                     LHGLALRIPILGIMAKADFTGLLLMQQGMRNRSYTPPVPQDRSEMLDKLIAEGRTGVM
                     AGKGYFDWGDRSPEELFRERDRKLLALKQALRAIGPMEGT"
     gene            complement(1815..3506)
                     /locus_tag="VHX39_03860"
     CDS             complement(1815..3506)
                     /locus_tag="VHX39_03860"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3990291.1"
                     /translation="MTYAEPVTGAEYLARSLAANGTTHVFFIDAVLRRTLIELGTLGV
                     QRVLGHSEKAIAYMADGYARIAGRPGICFAQSVGAANLASGLQDAYLGRTPVIAMTGH
                     KQPSMQHRNAYQEIPHTPLFAPVTKFSARVDQAADLPRLMRQAWREAMTGTPRPAHLD
                     LNGLQAEVIETGTVHEAPVADPAFQLTLPPHRPVASAAEIERAAERILRAKKVVIVAG
                     EGATASSAGKELLALGELLAAPIATSLGARGLIPTRHRLSIGCAGNYAAPPANQIVHE
                     AELVVFVGCETGDQVTHTWRIPAIDTACVQIDLDPTDIGRSYADTVGVMGDPRATVAA
                     LIAALGRPVRDTAFADRAAGIMAAWRQNRAAALASNASPIWPDRLCEEITRALPTDGI
                     LVADTGYSSIWSSSLIELNGEGQTYLRAAGSLGWSFPAALGAKCAAPHRKVICWSGDG
                     ALYYHLTELETARRRGIAVVLVVNNNSGFGQGWPNIQRQQGNKPGDVAELVRFGPTNF
                     ADVAKVFGLRGIRVEDPAQIGPALRDALASDETVVVDVATDIDCRAPEPWLPEGV"
     gene            3699..4469
                     /locus_tag="VHX39_03865"
     CDS             3699..4469
                     /locus_tag="VHX39_03865"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3990292.1"
                     /translation="MSDAASPRPFEGRTAIVTGSGQNIGRAIALAFARLGANVIVNGH
                     RNQAAIDAVAEEARALDVRAIAVLADVGDPAAVQSMVDRGAKEFGSVDIAVSNVSMRL
                     HTPFLDLSIEEWQRIINSNLSASFYLAHAVAPLMKAKNWGRIIHISGVDGFRAIPNRA
                     HNVTCKAGMFALSKAIAVELGPFGITANTVAPGVIDTTRDWTQYPHFANGYGERTKQI
                     PVRRVGHVDDIADACTYLAGAGFVTGQVLHVNGGDAMF"
     gene            complement(4540..6132)
                     /locus_tag="VHX39_03870"
     CDS             complement(4540..6132)
                     /locus_tag="VHX39_03870"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004612 - phosphoenolpyruvate
                     carboxykinase (ATP) activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase"
                     /protein_id="HEX3990293.1"
                     /translation="MKAAAAALAGTGVHSSRPVHANQTAPALVAEALRRHEGRLSVDG
                     AFMVETGVHTGRSVQDKFVVDEPSVTADIWWGKVNQPMSVDRFNALKGRVKAYLQGQE
                     LFTQDLYAGADPEHRVRVRLVTTQAWNALFARNMFIRPPEEDLAGFEPDYVILHAPLF
                     QTDPEVDGVRSSTTIALSFEQKLIVIAGSEYAGEVKKSIFGVMNWLLPPKGVMPMHCS
                     ANIGRDGDVALFFGLSGTGKTTLSSDPERKLIGDDEHGWGDNGTFNFEGGCYAKVINL
                     SQEAEPEIWAASNRFGSVLENVIGDAHGNLDLTDGSLTENTRSCYPVEFIPNVNLSGR
                     GGQPKNVFMLTCDAFGVLPPISRLTPAQAMYHFLSGYTAQVAGTEKGLGSEPKATFST
                     CFAHPFLPRRPEVYGRMFADLITKHGATCWLVNTGWSGGQFGVGKRMAIKHTRALLRG
                     ALDGSLTKMEFRKEPYFGLAIPAHVPGIPDDVLDPRQSWADKAAYDRVAKQLIDRFEE
                     NFATYEAGVGDDVKAAAIRAAA"
     gene            complement(6314..7759)
                     /locus_tag="VHX39_03875"
     CDS             complement(6314..7759)
                     /locus_tag="VHX39_03875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008942700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3990294.1"
                     /translation="MAVTCIRNAAWIIAWDPTLGRHAYLRDADLVFEDDRIRFIGRLY
                     TGAFDIEIPGTGLLVMPGLVNIHSHPSTEPFFRGIREEHGLPTMFMTGLYERGFAFRP
                     DAAGRVAGKTTAYCEMLLTGITTVADLSGIDEGWIDLAARSGLRVFLAPSYASARWHL
                     TNNWQLQYNWDEPAGRNGFDAALRLIDAAQVDPSGRLSGVISPAQIDTCTRDLLRDSH
                     DAAVERNLPFTTHCAQSVNEFNEMTNRHGITPVQWARDIGILGGSTVLGHAIFIDEHS
                     WLHWHTREDLGILAATSTSIAHCPSPFARYGQTLEDFGRYVRRGVNIGMGTDVAPHNL
                     IEEMRLAATLARVAAEDITATSLTDVFHAATAGGAQALGRIDIGRLAPGAKADLVLVD
                     LTNPWMMPARDPLRSLVYTAADRAIHKVFIDGRLVVDQGKVLTLDHAAALEALTEAQS
                     RMIAAVPGYDWARRHADQLTPMSLPMAQGLN"
     gene            complement(7775..8968)
                     /locus_tag="VHX39_03880"
     CDS             complement(7775..8968)
                     /locus_tag="VHX39_03880"
                     /EC_number="1.14.13.24"
                     /inference="COORDINATES: protein motif:HMM:NF006021.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybenzoate 6-monooxygenase"
                     /protein_id="HEX3990295.1"
                     /translation="MTRTRPILVAGAGIGGLAAALGLARSGFDVVVLERAAVLGEVGA
                     GIQLGPNAFHAFDWLGIGDAARAMAVYVEKLRLVDAMTAEDICSIDLGEAFRRRFGNP
                     YAVVHRGDMHGVFQRACLENPRITIRTGCTVEGYDQDGDSVTVRLAGGATVTGRLLIG
                     ADGLWSKVRHQVVGDGAPRVTGHSTYRSVIPTEQMPEDLRWNAATCWAGPKCHIVHYP
                     LSDWKMFNLVVTYHNDAPAPVAGLPVSDEDVMAGFHHVHPKAREVIRHGTDWKLWVLC
                     DRDPVENWIDGRVALLGDAAHPTLQYMAQGACMAMEDGVCLAHELAGSPDDHAAALER
                     YRRQRVLRTARIQLQSRAMGDHVLHPSGAHAALRNAIMSKKTDAEWYDSLAWLYGGTG
                     LGGAI"
     gene            9216..>10173
                     /gene="trpB"
                     /locus_tag="VHX39_03885"
     CDS             9216..>10173
                     /gene="trpB"
                     /locus_tag="VHX39_03885"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEX3990296.1"
                     /translation="MNSVPNSLRAGPNERGRFGEFGGRFVAETLMPLILEVERAYDAA
                     KADPAFDTELQYYLKHYVGRPSPLWFAERLTKHLGGAKVYFKRDELNHTGSHKANNCM
                     GQILLARRMGKTRIIAETGAGQHGVATATMCALFGLPCTVYMGATDVERQSPNVFRMK
                     LLGAEVKPVTSGAGTLKDAMNEAMRDWVANVADTYYLIGTVAGPHPYPMMVRDFQSVI
                     GEEAKQQLQEAEGRLPDAAVACIGGGSNAMGLFHPFLDDTTVRLIGVEAGGHGIETGE
                     HAASLTGGRPGVLHGNRTYLLQDDDGQIIEAHSISAGLDYPGI"
BASE COUNT         1930 a         3533 c         2915 g         1795 t
ORIGIN      
        1 aacagttcgt tcaccgccgc atctgacgtc gtcctgactt tctgaacctt gcttggatcg
       61 gataacaaca caggccaggg gtcgaaccct ggcctgtttg cttcctacag cgtcaaacca
      121 ccatccacgg tgatcgtctg cccggtcacc atcgcggcac caaatcccag gaccacaatg
      181 acctcagcca ggtcttcggg ctggcagcgc cgtttcagca gcgcacgttc gatcgactgc
      241 tgccgctcct cattcgtcca ttccaccatc caggcgctgt ccaccgcccc cggcgctatg
      301 gcgttcaccc gcacctccgg cgccagtgcc cgagcgaggt tctgtgtcag gctgaccacg
      361 ccggctttgg tggcaccgta agccaggctg ctgccggcac gacccagccc agcgatcgaa
      421 gcagtattga caatagcgcc ccccgccttc ttcagcgccg gtgctgccgc cttggcacag
      481 cggaacacac ccagcagatt cgtctccaac aggaccgacc agagttcctc ggtgatcagg
      541 tccaggtccg gcggcgcgat ccggtgccgc gttcccggcg tgccggcatt gttcaccaac
      601 aaatccagcc gccccagatc ggcaacggcc tgctgaacca ttcgcgccga atccgtcgcg
      661 tcgccaacgc tgcccggcgc catgacagcc ttgccacccg cggcaattaa tttgtcgacc
      721 gcctccggtc cacgtgggtc gtcggtcagg aagttcacgg ccacggtggc accgaacccg
      781 gacagcatct tcgcggtggc aaaaccgata ccggatgcgc cgcccgttac caatgcggtc
      841 ctgccggtca gatcgtaacg aatcatgtgc cctccatcgg gccaatcgcc cgcaatgcct
      901 gtttcagcgc cagcaacttc cggtctcgtt cccggaacaa ctcttccggt gaccgatcac
      961 cccagtcaaa ataacctttg ccggccatca ccccggtgcg cccttcggcg atcagcttgt
     1021 ccagcatctc gctgcggtcc tgcggcaccg gcggcgtgta actacggttc cgcattccct
     1081 gctgcatcag cagcagtccg gtgaaatccg ccttggccat gattcccagg atcggtatgc
     1141 gcaacgccaa cccgtgcagc accgaatcat cgatgtcttt cggcgtcacc agaccctcat
     1201 ccagcaaccg gtagacctcc agttgcatcg ccgcctgcag acgattggcg atgtaaccct
     1261 gcaccatctg cttgaacacc accggcgcct ttcccatcgc cgcaaccata tcgcggacga
     1321 tttcgatcac accgggtttc gtgcctggac cgggacacag atcgaccagg tcgcacagat
     1381 agggcggcgt ataccagtgc gcgatcacgg tacgttcctg cattgccgcc ggcaccagcg
     1441 ggaagatatc caggttggag gtgttgctgg ccaggatcgc atccggctcc atcagcgatt
     1501 gcagttgctc gtacagagcc agcttcacat ccggtcgctc caccaccgct tcgaccacga
     1561 gcgatgcacc cttcaccgtg tcggccagcg acggcacgca acgcacggct ttcgacaacc
     1621 gctgacggtt ccaggtccca tcgacttcgc tggcttcagc caaggtcgca agcgcggttg
     1681 ccatcaagcc cggtgcccgc tccagcgact cggcgttgtt gtcggtcagg cgcacctgat
     1741 gcccacccaa ggcaaaaacc agagccagcg catgccccat caggcccgcg ccgacaaccg
     1801 ctacttcggc catgctaaac tccctccggc agccaaggct ccggcgcccg gcaatcgatg
     1861 tcggtcgcca catcaacgac aacggtttca tcagaggcca gcgcgtcgcg caatgccggt
     1921 ccaatctgcg ccggatcctc tacgcggata ccgcgcaggc cgaaaacttt cgccacgtca
     1981 gcgaaattcg tcggcccaaa acgcaccagt tcggccacat caccaggctt gttaccctgc
     2041 tgccgctgga tattcggcca tccctgtcca aaccccgagt tattattgac caccagcacc
     2101 accgcgatgc cacggcggcg cgccgtctcc agttcggtga ggtggtagta caatgccccg
     2161 tcgcccgacc agcagatcac ctttcgatgc ggtgccgcgc atttcgcccc cagcgccgcc
     2221 gggaacgacc aacccaaaga cccggccgcc cgtagatacg tttgcccttc gccattcagt
     2281 tcgatcaacg aactgctcca gatgctggaa tatcccgtat cggccaccaa aatcccgtcc
     2341 gtaggcagcg cccgtgtgat ctcctcacac agccggtccg gccagatcgg cgacgcattg
     2401 ctcgccagcg ccgccgctcg gttttgccgc cacgccgcca tgattcccgc cgcccgatcg
     2461 gcaaaggcgg tgtcgcgcac cggccggccc aacgcggcaa tcagcgccgc caccgtcgcc
     2521 ctcgggtcac ccatcacacc cactgtatcg gcgtaggagc ggccaatatc ggtaggatcg
     2581 aggtcgatct gcacacaggc cgtgtcaatc gccggaatgc gccaggtatg ggtgacctga
     2641 tcgcctgtct cgcagccgac gaacaccacc agttcggctt catgcacgat ctggttcgcc
     2701 ggcggcgcgg catagtttcc ggcgcaacca atcgacagcc gatgccgggt cggaatcaag
     2761 cctcgtgcgc ccagcgacgt agcgatcggc gcggccagca actcacccaa tgccagcagt
     2821 tccttcccgg cggacgatgc tgtcgcgccc tcaccggcca cgatcacgac cttcttcgca
     2881 cgcagtatcc gttccgccgc ccgctcgatt tcggccgctg atgccacggg gcgatgtggc
     2941 ggcagggtaa gctgaaacgc cggatcggcg accggggcct catggacagt gcctgtctcg
     3001 atcacttccg cctgcaaccc gttcagatcg agatgcgctg ggcgcggcgt gccggtcatc
     3061 gcctcccgcc acgcctgccg catcagcctc ggcaaatcgg cggcctggtc cacccgagca
     3121 gagaattttg ttaccggcgc gaacaacggt gtgtgcggga tttcctggta ggcgttgcga
     3181 tgttgcatcg acggctgctt atgccccgtc atcgcgatca ccggcgtgcg gccaagatag
     3241 gcatcctgca atccggacgc caaattcgcc gcccccaccg actgcgcgaa gcaaatcccc
     3301 ggccgtccgg cgatgcgggc atagccgtcg gccatatagg cgatagcctt ttcactgtgg
     3361 cccaaaacgc gctgaacacc cagcgtgccg agttctatca gtgtgcggcg cagcacggca
     3421 tcgatgaaaa agacatgagt ggtgccattc gcggccaggc tacgcgccag gtactcggcg
     3481 ccggttaccg gttcggcgta tgtcatgaat gattcctccc gtggttggaa gaagtctaga
     3541 tcatcggtgt cgcgtgtaaa atcagaccat caggccgctc ggtatcctcc cgaatcgatc
     3601 cgtagaagcc aaaaacacac cgcaagtttg cgcgaaacat cagcaatgcc aaactcagcg
     3661 ctgtcttctc gcaattcaca cgccaaggat tccccgtgat gtccgatgcc gcctctcccc
     3721 ggcccttcga aggccgtacc gcgatcgtta ccggttccgg ccagaatatc ggccgagcca
     3781 ttgccctggc attcgctcgg ctaggcgcca acgtgatcgt caatggccac cgcaaccagg
     3841 ccgctatcga cgccgtcgcg gaggaggcgc gggccttgga tgtgcgtgcc atcgcggtgc
     3901 tcgccgatgt cggtgaccct gccgcggtcc agtccatggt ggatcgcggc gccaaggagt
     3961 tcggcagcgt cgacatcgcc gtctcgaacg tttcgatgcg gctgcacacc ccattcctgg
     4021 atctttccat cgaggaatgg cagcgcatca tcaactccaa cctcagcgcc tcgttctatc
     4081 tggcacacgc ggtcgcgccg ctgatgaaag cgaaaaactg gggccgcatc atccacattt
     4141 ccggtgtgga cgggttcagg gccatcccga accgagcgca caacgtgacc tgcaaagccg
     4201 gtatgttcgc cctgtcgaag gcgatcgccg tcgaactcgg accattcggc ataaccgcca
     4261 acaccgtggc ccccggcgtc atcgacacga cccgggactg gacgcagtat ccgcacttcg
     4321 ccaacggcta tggtgaacgg accaagcaga ttccggtacg gcgcgtcggc catgtcgacg
     4381 atatcgccga cgcctgcacg tatctggcgg gtgccggctt cgtcaccggc caggtgctgc
     4441 acgtcaacgg cggcgacgca atgttctgag gcaacacgtc cgtgggcgcg ctcgtttccg
     4501 acgcgaccac ggacgtcagt ccctgacgga gtcttcgccc tacgccgccg cgcggatcgc
     4561 cgccgccttg acgtcgtcgc ccaccccggc ttcgtacgtc gcaaagttct cctcgaaccg
     4621 gtctatcaac tgcttcgcca cgcggtcgta agctgccttg tcggcccagg actggcgcgg
     4681 atcgaggacg tcgtccggaa tgcccggcac gtgcgccggg atcgccaacc cgaaatacgg
     4741 ctccttgcgg aactccatct tcgtcaacga cccatccaga gcgccacgca acagcgctct
     4801 tgtgtgcttg atcgccatgc gcttgccaac accgaactgg ccaccgctcc agccggtgtt
     4861 caccagccaa caggtggccc cgtgtttggt gatcaggtcc gcgaacatcc gcccatagac
     4921 ttcaggccgg cgaggcagga acggatgcgc gaagcaggtg ctgaacgtgg ccttcggttc
     4981 actcccgaga cccttttccg tgccggcgac ctgcgcggtg taaccggaca agaagtgata
     5041 catcgcctgc gctggagtca gccgtgaaat cggcggcagc acaccgaacg catcgcaagt
     5101 cagcatgaac acgttcttcg gctgtccgcc acgaccgctc agattgacat tggggatgaa
     5161 ttcaaccggg tagcaggacc gggtgttctc ggtcagtgaa ccatccgtca gatccagatt
     5221 gccatgtgca tcaccgatga cgttctcgag caccgagccg aaacggttgg acgccgccca
     5281 gatctcgggt tcggcttcct gcgacagatt gatgaccttg gcgtagcagc cgccctcgaa
     5341 gttgaaagtt ccgttatcgc cccagccatg ttcatcgtcg ccgatcagtt tacgctccgg
     5401 atcggatgaa agtgtcgtct tgccggtgcc ggacaaacca aagaacagcg ccacgtcgcc
     5461 gtcgcgaccg atattggcac tgcaatgcat cggcatcaca cccttcggcg gaagcagcca
     5521 gttcatcaca ccgaaaatcg attttttcac ttcgcctgca tactcgctgc cggcgatgac
     5581 gatcagcttc tgctcgaacg acagcgcaat ggtcgtggac gaccgcacac catcgacctc
     5641 cggatcggtc tggaacagcg gtgcgtgcag aatgacgtaa tccggctcga accccgcaag
     5701 gtcctcctcc ggaggacgga tgaacatatt acgagcgaac agagcgttcc aggcctgcgt
     5761 ggtgaccagt cggacacgga cgcgatgctc cggatcggca ccagcgtata gatcctgggt
     5821 gaacaattcc tgtccctgca aatacgcctt gacccgccct ttcagcgcgt tgaaccggtc
     5881 caccgacatg ggctggttca ccttgcccca ccagatgtcg gccgtgaccg aaggctcatc
     5941 cacgacaaac ttgtcctgga cggagcggcc agtatgcaca ccggtttcga ccatgaaggc
     6001 accatcgacc gacagacggc cttcgtggcg gcggagtgcc tcggcaacca gggccggcgc
     6061 ggtctgattg gcgtgaacgg ggcgcgatga atgcaccccg gttccagcca gagcggcagc
     6121 ggcggctttc atcgatgcat tcttgttcgc gggggcgtgc gtcaagggtc ggtttcctac
     6181 cttcgtcagc gttgtcaaca cgccatgcaa gaatggcggg catccagcct catcggggcc
     6241 ggttcacctt ccaccagaag catggctttt ataagatgga ctatacgcaa cgtcacgccg
     6301 aatgaccaag atgtcagttc agcccctgag ccatcggcag gctcatcggc gtgagttgat
     6361 cggcgtggcg ccgcgcccag tcgtagcccg gcaccgcggc gatcatccga gactgggcct
     6421 cggtcaatgc ctccagcgcg gcggcatgat ccagcgtcag caccttcccc tggtccacca
     6481 caaggcgccc gtcgatgaac accttgtgaa tcgcacgatc ggcagcggtg tagaccagcg
     6541 aacgcagcgg atcgcgggct ggcatcatcc agggatttgt caggtcgacc agcacgaggt
     6601 cggctttcgc tcccggcgcc aggcggccga tatcgatacg gcccagcgcc tgcgcaccgc
     6661 ccgcggtggc ggcatggaag acatcggtca gggaagttgc ggtgatgtct tcggcggcga
     6721 cacgggccag cgtcgcggcg aggcgcatct cctcgatcag attgtgcggc gcgacatcgg
     6781 tacccatgcc gatgttcacg cccctgcgca catagcgccc aaaatcctcc agggtctgtc
     6841 catagcgggc gaacggcgac ggacagtgag cgatggatgt gctcgtcgcc gccaggatcc
     6901 caaggtcctc ccgcgtgtgc cagtgcagcc aggagtgctc atcgatgaag atcgcatggc
     6961 cgaggacagt gctgccgccg aggatgccga tgtcgcgcgc ccattgcacc ggcgtgatgc
     7021 cgtgccggtt ggtcatttcg ttaaattcat tgacactttg ggcgcaatgc gtggtgaagg
     7081 gcaggtttct ctcgaccgcc gcgtcatggc tgtcgcgcaa caggtccctc gtacaggtat
     7141 cgatctgcgc cggggaaata accccactca accgcccgct cgggtcaacc tgcgccgcat
     7201 cgatcagccg cagcgcggcg tcgaaaccat tccgcccggc cggttcgtcc caattgtatt
     7261 gcagttgcca gttgttggtc agatgccatc gggcggacgc gtagctgggg gcgagaaaaa
     7321 cccgcaatcc ggatcgcgcc gcgagatcga tccagccttc atcgatgccg gataaatcgg
     7381 cgacggttgt gatcccggtc agcagcatct cgcagtaggc ggtagtcttg ccagcgaccc
     7441 gccctgccgc gtccggacgg aaggcgaagc cgcgctcgta gagtcccgtc atgaacatgg
     7501 tgggcagacc gtgttcctcg cggataccac gaaagaatgg ctcggtgctg ggatgggaat
     7561 ggatgttcac cagtccgggc atcaccagca gacccgtccc cggtatttcg atgtcgaagg
     7621 caccggtgta caggcggccg ataaagcgga tgcggtcgtc ctcgaacaca aggtccgcat
     7681 cccgtaagta ggcgtgacgc ccgagggtgg gatcccatgc gatgatccag gccgcattgc
     7741 ggatgcaggt tacagccatg gtctcattcc ctcctcagat tgcgccaccc agccccgtgc
     7801 cgccatacag ccacgccaga ctgtcgtacc actccgcgtc ggttttcttt gacatgatgg
     7861 cgttgcgcag cgccgcgtgc gcgccggacg gatgcaggac atggtcgccc atcgcccgcg
     7921 actgcaactg aatccgagcc gttcgcagga cacgctgacg ccgataccgc tccagcgctg
     7981 cggcgtggtc gtcggggctg ccagccagtt cgtgcgccag gcagaccccg tcctccatcg
     8041 ccatgcacgc accctgggcc atgtactgca acgtcgggtg ggcggcgtca cccagcaggg
     8101 cgacccggcc atcgatccaa ttctcgaccg gatcgcggtc gcacaggacc cacaatttcc
     8161 agtccgtccc gtggcggatc acctcccgcg ccttcgggtg gacatggtgg aatccggcca
     8221 tcacgtcctc atccgagacc ggaagcccgg cgacgggtgc cggcgcatca ttgtggtacg
     8281 tgaccaccag attgaacatc ttccagtccg acaacgggta gtgaacaatg tgacatttcg
     8341 gtccggccca gcacgtcgcc gcattccagc gcaaatcctc cggcatctgc tccgtgggga
     8401 tcaccgagcg ataggtgctg tgcccggtca cccgaggcgc gccgtcgccg acaacctggt
     8461 gccgcacttt cgaccacagc ccgtccgcgc caatcagcaa acgaccggtc accgtcgcac
     8521 caccggccag gcgaaccgtg accgaatcgc catcctggtc gtagccttcg accgtacagc
     8581 cggtgcgtat ggtgatccgt ggattttcca gacaagcccg ctggaagacg ccatgcatat
     8641 cgccgcgatg taccaccgcg taggggttgc cgaaccgtcg ccggaacgct tcgcccagat
     8701 cgatcgagca gatatcctcc gcagtcattg catccaccag gcgcaacttt tccacataga
     8761 cggccatggc ccgggcggcg tcgccgatgc ccagccaatc gaacgcatgg aaggcgttcg
     8821 gacccaattg gatgccggcg ccaacttcac ccagcaccgc cgcacgttcc agtacgacga
     8881 catcgaagcc gctgcgtgcc agtcccagcg ccgccgccag gccgccgatt ccggcgcccg
     8941 cgacaaggat cggtcgggtt cgggtcacgc tgccctccac gtccgaacgc catgccctat
     9001 tgaaggattt ttatttgccg acacaacggt tcccctcagg tgtcgtttcc aacgtggacc
     9061 gcataccacg atagtcggca ttcgtcccct cgggcctgcc gcctcggcgc cgaaatcaca
     9121 aatccgcgcg gtgcggcctc gccttgacca aacagagcca acctctagaa ccgctgccgc
     9181 aaggagagtc cgtcttgaac accgcacccc caggtttgaa cagcgtgccc aacagcctgc
     9241 gcgccggccc caacgaacgc ggccgttttg gagaattcgg cggccgcttc gtcgccgaaa
     9301 cgctgatgcc gctgatcctg gaggtcgagc gcgcctacga cgccgccaaa gccgatcccg
     9361 ccttcgatac agagctgcaa tactacctga agcactatgt cggccgcccc agcccgctct
     9421 ggttcgccga acgcctgacg aagcatctcg gcggcgccaa ggtctacttc aagcgcgacg
     9481 aactgaacca caccggcagc cacaaggcca acaactgcat gggccagatc ctgctggccc
     9541 gccgcatggg caagacccgc atcatcgccg agaccggcgc cggccagcac ggcgtcgcca
     9601 ccgccaccat gtgcgccctc ttcggcctgc cctgcaccgt ctacatgggc gccaccgacg
     9661 tcgagcgcca atcccccaac gtcttccgca tgaaactgct gggcgccgag gtcaaacccg
     9721 tcacctccgg cgccggcacc ctgaaggatg cgatgaatga ggcgatgcgc gactgggtcg
     9781 ccaacgtcgc cgacacctac tatctcatcg gcaccgtcgc cggtccgcac ccctacccga
     9841 tgatggtccg cgacttccaa tcggtgatcg gcgaggaagc caagcaacag ctccaggaag
     9901 ccgagggccg tctgcctgac gccgccgtcg cctgcatcgg tggcggatcg aacgccatgg
     9961 gcctgtttca cccgtttctg gacgacacca ccgtccgcct gatcggcgtc gaagccggcg
    10021 gccacgggat cgagacgggc gagcacgccg ccagcctgac cggcggccgc cccggtgtgc
    10081 tgcacggcaa tcgcacctac cttctgcagg acgacgacgg tcagatcatc gaggcccata
    10141 gcatcagcgc cggcctcgac tatcccggca tcg
//
LOCUS       DATAVD010000212         1790 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2997119, whole genome shotgun sequence.
ACCESSION   DATAVD010000212 DATAVD010000000
VERSION     DATAVD010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2997119"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1212)
                     /locus_tag="VHX39_03890"
     CDS             complement(<1..1212)
                     /locus_tag="VHX39_03890"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyketide synthase"
                     /protein_id="HEX3990297.1"
                     /translation="MTTKPTVAEVAPVAIVGIGCRFPGDVADAAAFWRFLAAGRDAIA
                     EIPRDRIDLTHYYNEQPATPGRIMTRWGGFLAQIEGFDAAFFGMSPREAERLDPQQRL
                     LLETAWEALEDAGQDIAALEGSATGVFVGQWLSDFEARLFADPETVDFYMTTGSGRYA
                     SSGRLSYLLGLRGPSLTIDTACSSSLVAVHMAARSIRSGESKLALAGGVNVILQPHIS
                     VAYSQSRMMAPDGHCKFGDAAGDGYVRSEGAGLIVLKALDAALADGDRIYALIRGSAV
                     NNDGRSSGSMGTPSRVGQTELLREAYRDAQVSPGDVGYIEAHGTGTRAGDPVELGALG
                     AVLGEGRTSGKRARVGSVKTNLGHTEGAAGIAGLIKAALCLHHEAIPASLNCKQLNPA
                     IPWAELPVEIAL"
     gene            complement(1213..>1790)
                     /locus_tag="VHX39_03895"
     CDS             complement(1213..>1790)
                     /locus_tag="VHX39_03895"
                     /inference="COORDINATES: protein motif:HMM:NF013166.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thioesterase domain-containing protein"
                     /protein_id="HEX3990298.1"
                     /translation="ALVPVLRPHFDLPFAFFGHSMGAVLATELTMELLAAGGPAPQHL
                     FVSSRRPPDVPDPDTPLDGLSDAAFIAEINRRYGGIPTEVMQDAEMMALLLPSLRADI
                     SALENHAPRRPTRIPVPLSVFGGTHDSRVPRNQLEAWRQAAAGEFRIRIFTGDHFYIN
                     PRRSEVLAEISATLAPMLRTGVVAHPNVGGG"
BASE COUNT          374 a          593 c          519 g          304 t
ORIGIN      
        1 caaagcaatc tcaaccggca actccgccca gggaatcgca gggttgagct gcttgcaatt
       61 gagactcgcc ggaatcgcct cgtgatgcag gcacaacgcc gccttgatga gaccggcgat
      121 cccggccgca ccctcagtat gaccgaggtt tgttttcacc gagccgacgc gcgcacgctt
      181 tccggaagtg cgtccctctc ctaacaccgc accgagagcg ccaagctcga ccggatcgcc
      241 cgcgcgagta ccggtaccat gtgcctcgat gtaaccaaca tcgcccgggc tgacctgtgc
      301 gtcgcgatac gcctcgcgca gcaactccgt ctggcccacg cgactgggcg tgcccatgga
      361 gccactgctg cgaccatcgt tgttgactgc gctgccgcga atcaatgcgt agatccggtc
      421 gccatccgcc agcgccgcat ccaaagcttt caacacaatg aggccggcgc cttcactacg
      481 cacataaccg tcgcccgccg cgtccccgaa cttacagtgc ccatccggcg ccatcatccg
      541 actctgcgaa taggccacgc tgatatgcgg ctgcaaaatg acattcacgc cgccagccag
      601 agccaacttg ctctcgccac tgcggatgct gcgagccgcc atgtgcacag cgaccaacga
      661 cgatgagcac gccgtatcga tcgtcagact cggcccgcgc agtccgagaa gataagacag
      721 gcgtccggag gaagcgtaac ggccacttcc cgtggtcatg tagaaatcga cggtttccgg
      781 atcggcgaac aggcgcgctt cgaaatcgct cagccattgc ccgacgaaaa cgcccgtggc
      841 ggagccttcc aacgccgcga tatcctggcc ggcatcctcc agcgcttccc aggctgtttc
      901 caacagcagg cgttgttgcg gatccaaccg ctccgcctcg cgaggcgaca tgccgaagaa
      961 cgcagcgtcg aagccttcga tctgcgctag aaagccaccc caacgtgtca taatccggcc
     1021 aggtgtggcc ggctgctcat tataatagtg tgtgagatcg atacgatcgc gcggaatctc
     1081 ggcaatcgcg tcgcgacccg cggcgagaaa acgccagaaa gcggccgcat cggcgacatc
     1141 gccgggaaac cgacagccga tcccgactat cgcgacgggg gcaacttccg ccacggttgg
     1201 ttttgtagtc actcagccgc ctccgacgtt cgggtgtgcc acgacgcccg tccgcaacat
     1261 cggcgcaagg gtcgccgaga tttccgccag cacttcgctg cgacgcggat ttatgtagaa
     1321 atgatcgcca gtgaaaatgc gtatccggaa ttcaccggct gcagcctgcc gccacgcttc
     1381 caattggttg cggggcaccc gcgaatcgtg cgttccgcca aacaccgaga gcggaacagg
     1441 aatacgggtt ggccgccttg gcgcgtgatt ttccaacgca cttatgtctg cccgcaagct
     1501 tggcaacaat agggccatca tttccgcgtc ctgcatcact tccgtgggga tgccaccgta
     1561 gcggcgattg atttccgcaa tgaatgctgc atcggacaaa ccatcgagcg gcgtgtcagg
     1621 gtcagggaca tcaggaggtc gccgtgacga aacgaacaga tgttggggtg cggggccgcc
     1681 ggcggcgagt aactccatgg tgagctcggt ggcgagcacc gcgcccatgc tgtggccgaa
     1741 aaaggcgaac ggcagatcga aatgcggacg cagcaccggc accagcgccg
//
LOCUS       DATAVD010000213         2687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2253463, whole genome shotgun sequence.
ACCESSION   DATAVD010000213 DATAVD010000000
VERSION     DATAVD010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2687
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2253463"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VHX39_03900"
     CDS             complement(<1..317)
                     /locus_tag="VHX39_03900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990299.1"
                     /translation="MAYSEPRIDNPATPVAASWNTAIAREAKPPVSDCDAGQSFQTYE
                     IKSASDRAISMIFRRWEYCQGDAHGRHETKASNLALSPRPQPISLDGLFISGTNWRQF
                     LTD"
     gene            complement(343..762)
                     /locus_tag="VHX39_03905"
     CDS             complement(343..762)
                     /locus_tag="VHX39_03905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990300.1"
                     /translation="MIKGLALATMAFWCLAGTAFAQVPLPCPFAATPQEKIVCADPGL
                     TKLREQLEARYLQATAQLSQQGQDMLGNNLNAWRKYVSVVCAKTMTSDQKQCLRHVYE
                     EQLQIVSHAAKRIGPYPFTQLQQFHVQQNFDTTPGRK"
     gene            complement(759..1172)
                     /locus_tag="VHX39_03910"
     CDS             complement(759..1172)
                     /locus_tag="VHX39_03910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEX3990301.1"
                     /translation="MPFVLDASIVAYWALDDEDDRVADLTFERIRTDEARVPVLWWFE
                     VRNILIVNEHRSRLTKTATAAFLRELAQMRVLVDRSPDETDILSLASRHRLSVYGASY
                     LELARRGGISLATLDNELRAGALAAGVALLGENDG"
     gene            complement(1172..1417)
                     /locus_tag="VHX39_03915"
     CDS             complement(1172..1417)
                     /locus_tag="VHX39_03915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008219 - cell death [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HEX3990302.1"
                     /translation="MREVQASEAKTHLPQLLDEVERGETLVITRHGRAIARIIPETQR
                     RQEEIDKAIENMKALRKRTAKVTVDEILSARHEGHKY"
     gene            complement(1548..>2687)
                     /locus_tag="VHX39_03920"
     CDS             complement(1548..>2687)
                     /locus_tag="VHX39_03920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990303.1"
                     /translation="GSLPRPAALTALYSRRAAGEGVDPVAIDAAGKTATRHVVRQQIA
                     AGIDVGNNGEQQREAFFLYVRHRMTGFGGTWTRRPVADLTRYPKYQALAAAADSARPS
                     VSNRGALPSATGPVTYIDPALVEAECDEFQAAMDEVGAPGFLEPFMTAPSPGIIAAAM
                     RNEHYDTEAAYLAALGRALQVEYEVIVRHGFLLQIDAPDLALERHITYQDQPVSAFLD
                     FAERVVATINDALVNIPHDQVRIHACWGNYEGPHDCDVAMAEILPAIGKAHVGGWVLP
                     IANPRHQHEYRCLKDLPLDDGQVVVAGVIDPLTNFIEHPEVVADRLENVARVIGDPTR
                     LLAGTDCGFDTSAGRGRVTEDVVWAKLAAMTEGARIASRRLGMAG"
BASE COUNT          525 a          835 c          790 g          537 t
ORIGIN      
        1 caatcggtca ggaattgtcg ccagtttgtt ccgctgatga aaagcccgtc gagcgagatc
       61 ggttgcggcc tcggggacag tgccaggttg ctcgccttcg tttcgtggcg accgtgggcg
      121 tcgccttggc aatattccca acgccgaaaa atcatactga tcgccctgtc tgatgcactt
      181 ttgatttcat aggtttggaa gctttgcccg gcgtcgcagt cactgacggg tggcttggcc
      241 tcacgcgcta tcgcggtgtt ccaggatgca gctacagggg tcgcgggatt gtcgatccgg
      301 ggctcgctat aggccatgac caaaggtctg agcggagaat cgtcacttcc taccgggggt
      361 agtatcgaaa ttctgctgga cgtgaaactg ctggagctgg gtgaagggat acggaccaat
      421 ccgcttcgcc gcatggctca cgatttgcaa ttgctcctcg tatacatgcc gaagacattg
      481 cttctgatcg gatgtcatgg tttttgcgca gacgacggac acatactttc gccacgcgtt
      541 gaggttgttt cccaacatgt cctgaccctg ttgagacagt tgtgcagtcg cctgcaggta
      601 tcgcgcttca agctgctcgc gcaatttcgt cagaccagga tcagcgcaaa caattttctc
      661 ctgcggtgtc gccgcaaacg ggcagggcag agggacctgc gcaaacgccg taccggccaa
      721 acaccagaaa gccatggtcg cgagggccag ccccttgatc atccatcatt ttctccaaga
      781 agcgccacac cggcagccag cgccccggca cgtagctcgt tgtcgagagt ggcaagcgaa
      841 atcccacccc gccgcgcaag ttccaggtag ctcgcgccgt agacgctcag ccgatgccgg
      901 ctggcgagtg agagaatgtc agtttcgtca ggcgatcgat cgaccaacac gcgcatttgc
      961 gcgagttcac gcaagaacgc cgccgttgcc gtcttggtca atcggctgcg gtgctcgttc
     1021 acaatgagaa tattccgaac ctcgaaccac cacagcacgg gcacacgcgc ttcgtcggtg
     1081 cgaatacgct cgaatgtcag atcagcgaca cgatcgtcct cgtcatccag tgcccaatat
     1141 gcgacgatgg aggcatcgag aacaaagggc atcagtattt gtgcccctca tgccgagcgg
     1201 aaaggatttc gtccacggtg accttcgcgg tgcgctttcg gagcgccttc atattttcga
     1261 tcgccttgtc gatttcctcc tgtcgtcttt gcgtctcggg aatgatccgc gcgatcgcac
     1321 ggccgtggcg ggtaatcacc agagtttcgc cacgctccac ctcgtcgagt agttggggga
     1381 ggtgggtctt ggcttcagag gcctgaactt cgcgcatggc gggcacccat aaacgattgg
     1441 tcgatgtgac tggtcgatta tatgagccgg ccaggatgcg gcgtaaacca gtacggccga
     1501 tggccgacga attaatctgg cagctacgac tctcagcccg ggaacaacta ccccgccatc
     1561 cccaatcgcc gcgaggcgat ccgcgccccc tccgtcatcg ccgccagctt cgcccacacc
     1621 acgtcttcag tcacccgccc ccgcccggcg gaggtgtcga acccgcaatc cgtccccgcc
     1681 aacaaccggg tcggatcgcc aatcaccctc gcaacgtttt ccagccggtc cgccaccacc
     1741 tcgggatgtt cgataaagtt ggtcaacgga tcgatcaccc ctgcgaccac tacctgacca
     1801 tcatccagcg gcagatcctt caaacagcgg tactcgtgtt gatgccgcgg attggcgatc
     1861 ggcagcaccc agccgccgac atgggccttg ccgatcgccg gcagaatttc tgccattgcg
     1921 acgtcgcaat catgcggccc ctcgtagttg ccccaacagg catggatccg cacctggtcg
     1981 tggggaatgt tcaccagcgc atcattgatc gttgccacca cgcgttccgc aaaatcaagg
     2041 aacgccgaca ccggttgatc ctgataggta atgtgccgtt ccagtgccag gtccggcgcg
     2101 tcgatctgca acaggaagcc gtgccgcacg atcacctcat attcgacctg caaggcacgt
     2161 ccgagtgcag ccagatacgc cgcctcggta tcgtaatgtt cgttgcgcat tgctgcggcg
     2221 atgatgccgg gggagggcgc ggtcatgaac ggttcgagaa atcccggcgc gccaacttca
     2281 tccattgcag cctggaactc gtcgcactct gcctcgacca gcgcggggtc gatatacgtg
     2341 actggaccgg tcgccgaggg caaagcgccg cgattgctga cagagggccg cgcactgtct
     2401 gctgcggcag ccaaggcctg gtatttcgga tagcgggtga ggtcggcgac ggggcggcgt
     2461 gtccacgtgc cgccgaagcc tgtcatgcgg tggcggacat aaaggaaaaa tgcctcacgt
     2521 tgctgctcgc cgttattgcc gacgtcgatg ccggcagcga tctgttgacg cacgacatgg
     2581 cgggtggcgg tcttgcccgc ggcgtcaatg gcgaccgggt ccacaccctc accggcggca
     2641 cgacgcgagt acagcgcggt caaagcggcc ggacggggca ggctgcc
//
LOCUS       DATAVD010000214         5056 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_205657, whole genome shotgun sequence.
ACCESSION   DATAVD010000214 DATAVD010000000
VERSION     DATAVD010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5056
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205657"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..278)
                     /locus_tag="VHX39_03925"
     CDS             complement(<1..278)
                     /locus_tag="VHX39_03925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990304.1"
                     /translation="MKITVYTDYKSPYAYLANGPIFELAQELSVSLEWKPYILDIPKF
                     LGSARVDATGNVLEQDRNAHQWRRVRYSYMDCRRQARKQGLTIRGPQK"
     gene            complement(275..1228)
                     /locus_tag="VHX39_03930"
     CDS             complement(275..1228)
                     /locus_tag="VHX39_03930"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3990305.1"
                     /translation="MAIDPDTQAVLDMIRLAGRPPFETLSPDEARQAYTASRRLLQPQ
                     PEDVAESRDTVVPGPLGPIGVRLYRPAGTAASDVLPALIWYHGGGWLLGDLDSHDVPC
                     RRFANAARCRVIAVDYRMAPEHIFPAAVDDCATVTKFVFDNAASLGVDPGKVAVGGDS
                     AGGNLAAVMALMSRDGTLPPIAFQLLIYPATDMAMTTVSSTTIGPGVPLTSATMKWFI
                     DYYAKGHEIDWRASPIRAASVAGTAPALVLTCTHDPLRDEGIDYAKRLEREGVRVVHL
                     HYSDQIHGFMSMGRLIRAADQAIDMMARVLKQTLWPPGPVS"
     gene            complement(1240..2022)
                     /locus_tag="VHX39_03935"
     CDS             complement(1240..2022)
                     /locus_tag="VHX39_03935"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3990306.1"
                     /translation="MSEPQTSTIDVNGFSTRVWRAGTGPKLGFLAGFGGLPRWMPILD
                     ELARSRTLIVPSLPGFPGGDRGHSVLDSHLDWMLAVREILEKSDLVGADLAGSSVGAS
                     LALEVAALWPASVRRVAAIAPFGLFDESHPPTDPWAQRADQVPGLMCADPEIWKAMKA
                     TPEGANSIEWPIEQTRAAEAAARIFWPLGNTRIEKRLRLITAPVLLLWGENDKIMPRT
                     YAETFARGIAGKTTTQIVPGAGHLAELDKPAEVAKAILDFTA"
     gene            complement(2035..3315)
                     /locus_tag="VHX39_03940"
     CDS             complement(2035..3315)
                     /locus_tag="VHX39_03940"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3990307.1"
                     /translation="MKLMWFHLMPYTELPEDFRDANPSVWVDIHSSLFDPKRAHLMYN
                     DFMDELEYAAEVGFDAVCVNEHHSNGYGLMPSPNLIASALSRRTRDTAICVMGNSLAL
                     YNPPTRVAEEFAMIDCISGGRLIAGFPVGTPMDTCYAYGTNPSQLRQRYMEAHDLVVR
                     AWTEKDTFAFNGRFNQQRYVNIWPRPVQNPHPPIWVPGGGSVETWRWCAEMDYVYCYL
                     SYYGYKAGRATMDGFWSEMDRLGKQRNPYQAGFLQFIGVGESRQHAFDLYAEAAEYFY
                     GRCLHVDPKWATPPGYTSEGSQRAGIESQVKQAADANVRGKSTGERFASVAREMEAIV
                     DNGYVIIGSPDEVAEQLREVAVNLNVGHLMLLLQYGNMSKDLTRYNTRLFAEQVMPKL
                     KDLHSSWDDRWWPKPMQSSERADIAAFQPRLAAE"
     gene            3503..4708
                     /locus_tag="VHX39_03945"
     CDS             3503..4708
                     /locus_tag="VHX39_03945"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3990308.1"
                     /translation="MSDVVMTGPVAGLAVSGADCLARAHTLIPLLQSAAARIDSAREL
                     PDDVLDAMHDAGMFRLLIPRAYGGFELKPSEFVQCVEAIAIGDASAAWCMNQGSGCSM
                     TAAYLAPEVSREIWGGKRDVLAWGQGPGAKAIRAEGGWRCTGTWSFASGSRHATWLGA
                     MCPCFHADGSPVLHPDGKPWDRTMLFRREFSRIDDMWQVVGLRGTGSDTYSIEDLFVD
                     DAHSVTRESPSERRETGMLYRFQAMQLYASGFACVGLGTARAALDAFIALAKGKSQAW
                     SSDRLRDNHAVQHIIGYADAALKAAKSGLLNVLDEQWMAVGRTGELTVEGRIAVRQAA
                     TFAIHTARDVVHQVYHEAGSTAIFDSQPFERRLRDINSVSQQLQGRRTHFETVGLYLL
                     GGTPNLRWL"
BASE COUNT          964 a         1439 c         1647 g         1006 t
ORIGIN      
        1 attttctgcg gcccgcgaat ggtcagacct tgcttacgtg cctgacgccg gcagtccata
       61 taactgtagc gtacccgtcg ccattggtgg gcattgcggt cttgttccaa cacattgccc
      121 gttgcgtcga cccgcgccga accaaggaac ttcggaatgt cgaggatata gggcttccac
      181 tctaaactga ccgacagttc ctgggccagc tcgaaaatcg gcccatttgc aaggtaggcg
      241 tacgggcttt tgtagtcggt gtaaacggta atcttcaact caccggtccc ggcggccaca
      301 gcgtttgctt cagtacccgg gccatcatat cgattgcctg gtcggcggcg cggatcaacc
      361 ggcccatgct catgaagccg tggatttggt ccgagtagtg caaatggacc accctcacgc
      421 cttcgcgctc cagccgtttg gcatagtcga tcccctcatc gcgcaatgga tcgtgcgtgc
      481 aggtcagcac cagcgcgggt gcggttccgg cgacgctggc ggcacggatc ggcgaggcgc
      541 gccagtcgat ttcatggccc tttgcataat aatcgataaa ccatttcatc gtcgctgacg
      601 ttagcggcac tcctgggcct attgtcgtcg acgacacggt cgtcatcgcc atatcggttg
      661 ccggataaat cagcagttgg aaggcaatcg gcggcagcgt gccgtcgcgc gacatcagcg
      721 ccatgacggc ggcgagattg ccgcctgccg aatcaccgcc aacggcgacc ttgcccgggt
      781 cgacaccgag ggaagccgcg ttgtcgaaga cgaattttgt aacggtggca caatcgtcga
      841 cagcagcggg gaagatgtgt tcgggcgcca tgcggtaatc gacggcaatg acccggcagc
      901 gcgcggcgtt ggcgaagcgg cggcacggca cgtcgtgtga gtcgaggtcg cccagaagcc
      961 agccgccgcc gtgataccag atcagcgccg gcaggacgtc cgaggcagcg gttccagccg
     1021 ggcgatacaa gcgaacgccg atcggaccga gcgggccagg gacgacggtg tcgcgggatt
     1081 cagcaacatc ttcaggttgt ggctgcaaca atctgcggct ggcggtgtag gcctggcggg
     1141 cctcgtccgg agacaacgtt tcgaacggcg ggcggcctgc cagccggatc atgtcgagga
     1201 cagcctgagt atccggatcg atcgccatgt tggctcgtcc tatgcagtga aatcgaggat
     1261 ggctttggcg acctcagccg gcttgtcgag ctcggccaga tggcccgcgc ctggaacgat
     1321 ctgcgtcgtc gttttgccgg caatgccgcg ggcgaacgtc tcggcgtaag tgcgcggcat
     1381 gatcttgtcg ttctcacccc acaacaataa gacaggagcc gtaatcaggc gcaaacgctt
     1441 ctcgatccgc gtgttgccga gcggccaaaa gatgcgggcg gcagcttcgg ccgcgcgcgt
     1501 ttgctcgatt ggccattcga ttgagttggc accttcgggc gtggctttca tggccttcca
     1561 gatctccgga tcggcgcaca tgaggccagg cacctggtca gctcgttgcg cccagggatc
     1621 ggtgggagga tgggattcgt cgaacaggcc gaagggggcg atggcggcga cgcggcgaac
     1681 ggaggcgggc cacagggctg cgacctccag ggccagcgac gctccgacgg aactgccggc
     1741 gagatcggcg cccacgaggt cggatttctc caggatctcc cggactgcga gcatccagtc
     1801 aaggtgcgaa tcaagcacac tgtgtccgcg atcgccgccg ggaaaaccag gcagcgacgg
     1861 aacgattaaa gtacggctcc tggccagttc gtcgaggatg ggcatccagc gcggcaaccc
     1921 gccaaagcct gccaggaacc cgagtttcgg gccagtgccg gcgcgccaga cgcgggtgga
     1981 aaagccgttg acgtcgatgg tcgacgtctg aggttcgctc actgtggttg ctccttattc
     2041 ggcggcgagg cgaggctgga acgcggcgat gtcagcgcgt tcgctggatt gcatcggctt
     2101 cggccaccag cgatcatccc aactcgagtg tagatccttt agtttcggca tgacctgttc
     2161 cgcgaacaac cttgtgttgt agcgagtcag gtccttgctc atgttgccgt actgcaacag
     2221 caacatcagg tgcccgacgt tgaggttgac cgcgacctcg cgcagctgct cggcgacctc
     2281 atcgggagag cctatgatga catagccgtt gtcaacgatt gcctccattt cgcgtgcgac
     2341 gctggcgaaa cgttcgccgg ttgacttgcc gcgcacattg gcgtcggccg cctgtttcac
     2401 ctgactttca atgccggcgc gttggctgcc ttcgctggtg tagccaggtg gagtggccca
     2461 tttcgggtcg acatggaggc agcgaccgta gaaatattct gctgcctcgg cgtaaaggtc
     2521 gaaggcgtgc tggcggcttt cgccaacgcc gatgaactgc agaaagcctg cctgatacgg
     2581 attgcgctgc ttgcccagtc gatccatttc ggaccaaaaa ccatccattg tggcacggcc
     2641 ggccttgtag ccgtaatagg acagatagca gtacacgtaa tccatctcag cgcaccagcg
     2701 ccaggtttcc accgagccgc cgccgggtac ccagatcggc ggatgtggat tttgtaccgg
     2761 ccgcggccag atgttgacat accgctgttg gttgaagcgg ccattgaagg caaacgtatc
     2821 tttttcggtc caggcgcgga cgacaagatc gtgcgcctcc atataacgtt gcctcagttg
     2881 gctcgggttg gtgccatagg cgtaacaggt atccatcggc gtgccgaccg ggaagccggc
     2941 gatcaaccgg ccgccggaaa tgcaatcgat catggcgaat tcttctgcca cacgggtcgg
     3001 cggattgtac agcgccagtg agttgcccat aacacagatc gcggtatcgc gggtgcgtcg
     3061 cgacagcgca gaggcaatca aattcggcga cggcatcagg ccgtagccgt tcgagtgatg
     3121 ttcgttgacg cagactgcgt cgaacccgac ttcagcggca tattccagct cgtccataaa
     3181 atcgttgtac ataagatgcg cgcgtttcgg atcgaacagt gaggaatgga tatcgaccca
     3241 gacggacggg ttcgcatcgc gaaaatcttc cggcaattcc gtgtaaggca tcaggtgaaa
     3301 ccacatcagt ttcattcgtg cgggctccgg acaggtgaaa tgctgtccgc gctgatcgcg
     3361 gaaagctacc gatgagtatt gcggcgaccc agggggtatg tcaatcgagg ggcccttccg
     3421 cacgctgttc gcctgacccc ttccgacctg ttggggatgt ccatacactt cacggccgcg
     3481 agcggcgcaa gggagcaggc ggatgagcga cgtggtaatg accggaccgg tggccggttt
     3541 ggcggtctct ggggcagact gcctcgcgcg cgcccacacc ctgattccgt tgttgcagtc
     3601 tgcagctgca agaatcgatt cagcgcggga gttgccggac gacgttctcg acgccatgca
     3661 cgacgcagga atgttccggc tgttgatccc gcgtgcctat ggcggatttg agttgaagcc
     3721 atccgaattt gtgcagtgcg tcgaggcaat cgcgatcggc gacgccagtg cggcctggtg
     3781 catgaatcag ggctcaggct gttcgatgac tgcagcgtat cttgcgccag aagtgtcccg
     3841 ggagatctgg ggcggcaaac gcgatgtgct ggcctggggg caagggcccg gtgcgaaggc
     3901 gatccgggcg gagggtggct ggcgctgcac tggtacctgg agtttcgctt ctggctcgcg
     3961 ccacgcgacg tggttgggtg cgatgtgtcc gtgtttccac gccgacggtt caccggtgtt
     4021 gcacccggac ggcaaaccat gggaccggac gatgctgttc cgccgcgaat tttcccggat
     4081 cgacgatatg tggcaggtgg tggggctgcg tggcacgggt agcgacactt atagcattga
     4141 ggacctgttc gtcgacgatg cgcactcggt gacgcgagag tcgccatcgg agcggcggga
     4201 gaccggcatg ctgtaccggt ttcaggcgat gcagctttac gcctccggct tcgcctgcgt
     4261 tgggctgggg acagcacgag cggcgttgga cgcgtttatc gcacttgcga aaggcaagag
     4321 tcaggcctgg agctcggacc gcctgcgtga caatcatgca gtgcaacata ttatcggtta
     4381 cgcggacgcg gcactgaaag cggccaaatc cgggctgttg aatgtattgg acgaacagtg
     4441 gatggcggtc ggacgtaccg gcgaactgac ggtggagggc cgcattgcgg tgcggcaggc
     4501 tgcgacattc gcgatccata ccgcacggga tgtcgtgcat caggtgtatc acgaggcggg
     4561 gtcgacagcg attttcgata gccagccgtt cgagcgccgg ctgcgcgaca tcaacagcgt
     4621 gtcgcaacag ctgcagggac ggcgaaccca tttcgagacg gtcggtctgt atctactggg
     4681 cggaacaccg aacctgcgct ggttgtaatt ttcccccgga gggatgcatg ccaatccagg
     4741 gcggcggcca tgaaactcgg atcaaacgcc gcatttcccc atgctatcaa tgagttgaat
     4801 gagtttcgaa aaaattatcg tagaagccgt aatcgcgttg acacacgagg ggacggcgcc
     4861 tacaaggcgc ctcccgcgat gaacccaggg tttggggcgg accggggtct cccggcgttc
     4921 tttgacaatt gcatattcga tggaagggat acgttggcgg cgcccgtgtg ttttcccgtg
     4981 cgtgagtgtg ggaagcagtc tgggcatctg gtccgatcgg tgacggagta tgaccatgag
     5041 ctctgtattg attgag
//
LOCUS       DATAVD010000215         2822 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_766276, whole genome shotgun sequence.
ACCESSION   DATAVD010000215 DATAVD010000000
VERSION     DATAVD010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2822
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_766276"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..549
                     /locus_tag="VHX39_03950"
     CDS             <1..549
                     /locus_tag="VHX39_03950"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3990309.1"
                     /translation="RATIDLDDIVTVFQALLRIAEIEAGSRRASFRRVDIVTALDGVA
                     DLYGAVAEEKGVDLTVAHPNRLEINGDAALIQQAVANLVDNAVKFSPEHGMVRLAAAQ
                     DGRRIRITVTDQGPGIPEEDRSRATERFYRGDMARGTPGSGLGLALVQAVAYLHGGVL
                     RLEDARPGLRAALELAYAEDTD"
     gene            611..937
                     /locus_tag="VHX39_03955"
     CDS             611..937
                     /locus_tag="VHX39_03955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990310.1"
                     /translation="MMWYRPSLFGKALLAVLGLFSFALSPAATVIAPAVAQTRDPIVT
                     SDTPEYCDVLMDRITGITRATAQPPPTEAALLSQEGERMCVHGQTRGGILRLRRALEI
                     ILHGDD"
     gene            1129..2198
                     /locus_tag="VHX39_03960"
     CDS             join(1129..1618,1618..2198)
                     /locus_tag="VHX39_03960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611116.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEX3990311.1"
                     /translation="MSAAIPITRLELTASELRRAAGKCGDGAQVRRLLALALVLEGRS
                     RQEAAEQSGMDRQTLSDWVHRYNASGVDGLKSAHAPGAAPLLSETQKAELRELVVQGT
                     DPAKDKVVRWRCLDLRDEIARRFSVRVHESTVGKWLRQLGLTRLQPRPCHPKTDLAAQ
                     EAFKKNFVGLMKNALLGTTANTPIEVWFQDEARVGQQGSLTYIWAPIGSRPRMVRDNR
                     HDSAYLFGGICPARGVGAAIIMPAANAEAMNEHLNEISTQVTPGAHAVLICDGAGWHQ
                     TGGRLRVPDNITLLPLPPYAPELNSMENVWEYLRANKLSRLVWDSYDTIVLACKEAWD
                     FLINDPDRIRSIGYREWACVNV"
     gene            2306..2822
                     /locus_tag="VHX39_03965"
                     /pseudo
     CDS             2306..2822
                     /locus_tag="VHX39_03965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612206.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT          546 a          820 c          910 g          546 t
ORIGIN      
        1 cgagcaacga ttgatcttga cgacatcgtc acggtgtttc aggccttgtt gcggatcgcg
       61 gaaatcgagg cgggctcacg ccgtgcctcg ttccggcggg tcgacatcgt caccgcgctg
      121 gacggtgttg ccgatcttta tggtgcggtg gcggaagaaa agggtgtcga cctcacggtt
      181 gctcatccga atcggctgga aatcaacggc gatgccgcgc tgatccagca ggcggtcgcc
      241 aatctggtcg ataatgcagt caagttctcg cctgagcatg ggatggtcag gctggcggca
      301 gcgcaggacg ggcgccggat ccgaatcacg gtcaccgatc agggacccgg catcccggaa
      361 gaggatcggt cccgcgccac ggaacgcttt tatcgaggcg atatggcgcg cggcacgccg
      421 ggttccggtc tcggcctggc tctggtgcaa gcggtcgcgt acctgcatgg cggtgtgttg
      481 cgcctggagg acgcgcggcc cggactgcgt gctgcgctgg aattggcgta cgccgaggac
      541 acagattgat aacatcggtt tcatcccagc aacaccatcc cgtcaggcga ttcatggtag
      601 ctggcagcat atgatgtggt accggccctc tctgttcggc aaggcactcc tggccgtact
      661 tggtctgttc tcgtttgctt tgagtccggc ggcgacggtc attgcgcccg ctgttgcgca
      721 aacgcgcgat cccatcgtca ccagcgacac gccggaatat tgcgacgtgc tgatggaccg
      781 gatcaccggg attacccgcg cgacggccca accgccacca accgaggcgg ctttgttgtc
      841 gcaagagggt gagcggatgt gcgtacacgg ccagacccgc ggcggcatac tgcggttgcg
      901 ccgtgcactc gagattatcc tccacggtga cgattagcgc gagctgagga gatgcggggg
      961 ttcattctgg tccctgacca agggccgctg cctcggtctg cgccgaggtc gctgctgttg
     1021 cgatcaacta ataccaacct gcgttgacct tgactctcgc ctcttccgaa tcccttgacg
     1081 gttcgattcg atgccggcgt ggcgaacccc gcccgaggga ggcatcagat gagcgcggcg
     1141 atcccgatca cccgtttgga actgacagcg tcagagcttc ggcgtgccgc cggcaaatgc
     1201 ggcgacggcg cgcaggtcag gcggcttctg gcactcgcgt tggtcctgga gggtcgctct
     1261 cgccaggaag cggccgagca aagcggcatg gaccggcaaa cattgagtga ctgggtgcat
     1321 cgctacaacg cgtcgggcgt cgatggcctg aagtcggctc acgcgccagg cgccgccccg
     1381 ctgttgagtg agacccagaa ggcggagttg agagaactcg tcgtgcaagg cacggatccg
     1441 gcgaaggaca aggtcgttcg ttggcgctgc ctggatttgc gtgacgaaat cgctcgtcgg
     1501 ttctccgtgc gggtgcatga aagcacggtg ggtaaatggc tgcgtcaatt gggtctgacc
     1561 cggttgcagc ccagaccgtg ccatccaaag accgacctcg cagcacagga ggcttttaaa
     1621 aaaactttgt cggcctgatg aagaacgcgc ttctcgggac caccgcgaat acgccgatcg
     1681 aggtctggtt ccaggatgaa gccagggtcg gtcaacaagg ttctctcact tacatctggg
     1741 caccgatcgg ctcacgcccg cggatggtgc gcgacaatcg gcatgactcg gcctacctgt
     1801 ttggcgggat ttgcccggcc cgtggtgtgg gtgcggccat tatcatgcct gccgccaacg
     1861 ccgaggcgat gaatgagcat ctcaacgaga tcagcacgca ggtgaccccc ggcgcccacg
     1921 ccgtcctgat ctgtgacggt gccggttggc accagaccgg cgggaggcta cgcgtgcccg
     1981 acaatattac tttgctaccc ctgccgcctt atgcgccgga actgaactca atggagaatg
     2041 tgtgggagta tctgcgcgcc aacaaactca gccgcctcgt ctgggacagc tatgacacga
     2101 tcgtgctcgc ctgcaaggaa gcgtgggact tcctcatcaa tgacccagac aggatcagat
     2161 caatcggata ccgggagtgg gcatgtgtca atgtctaagt gtccgtccct gaagttcatg
     2221 agtctttaga atcgattggc atgggggctt gcccggctcg aatcggctgt gactctatct
     2281 acagcaccga atcgcgaggt gcttcatgtg gacgaccgag aaccgccccc aatacgagcg
     2341 gaaaggcctg cgctatccca gcgacctgac cgacgccgag tgggatttgg tgaaaccgct
     2401 gattccacac gcgaaacgag gcggccgtaa gcgcgaggtc gtggttcgcg atgtgttgaa
     2461 tggcattctg tatgttctca gcactgcctg tcagtggcga gccctaccga aggatctgcc
     2521 gccacgcagc actgtgcacg gatatctcca acgctgggac tacgacggaa ccctgatgaa
     2581 tatccacgac gtgctctatg tcgcctgccg cgagttggcg gaaagagtgc ccagtccgac
     2641 agcgtgtgtg atcgacagtc agagcgtgaa gagcgctgaa aaaggggggc ctcgatcgat
     2701 ccgccgggat acgatgcggg caagaaaatc aagggcaaga agcgacatgt cctggtcgat
     2761 atgctgggcc tgatgctgca tgcgatcgtg cattcggcgg acatccagga ccgcgatggt
     2821 gg
//
LOCUS       DATAVD010000216         2321 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1510129, whole genome shotgun sequence.
ACCESSION   DATAVD010000216 DATAVD010000000
VERSION     DATAVD010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2321
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1510129"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..218
                     /locus_tag="VHX39_03970"
     CDS             <1..218
                     /locus_tag="VHX39_03970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990312.1"
                     /translation="ITVQIVIAVVFGGRRTILGAILGSIFLILFDELLRPLGQLNTFV
                     VSGIALAVIMFFPDGVLGWVLRPREPR"
     gene            218..1714
                     /locus_tag="VHX39_03975"
     CDS             218..1714
                     /locus_tag="VHX39_03975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3990313.1"
                     /translation="MDELAQTSAQITAPLLEVSGLTKRFGGLVAVRDIGFSIRPGEIL
                     GLIGPNGSGKSTVMRLVMGIERPNAGSIRLAGTEIAGWPTHQIARSGVGIVFQHSRPL
                     HRQSVLENIRLALLPDSLWRLIAEPHVDRRAREIAERVGLGQVLDRRPATLPFADLRR
                     LEMAKALARNPKVVLIDEPFAGLTQGEVATFSELIDGFRRDGHAVLLVDHNVKSVAAL
                     VDRVLAMYLGERIAEGTADEVMRDETVRRVYLGGKIEAHPRRQLDAGGEALLEVRDVD
                     VLYGKAQALRQVSIHVNAGEFVSVVGLNGAGKTTLFNAISGLVPFDGEIRFDGANLRG
                     RTPAGIARGGVVQCPETRELFGDLSVRENLDLGGQHLATEAARQTQLAWLFELFPILN
                     ERQGQNARTLSGGEQQMLAIARALMMQPKLLVLDEPTLGLAPVILEQLSKALSRLRET
                     TPITVLLGEQNVTFALPHADRVYVLEHARIVWEGDPGKFAEEMGTGYL"
     gene            complement(1996..>2321)
                     /locus_tag="VHX39_03980"
     CDS             complement(1996..>2321)
                     /locus_tag="VHX39_03980"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX3990314.1"
                     /translation="ELGRYYRAYSDLMEHWRQVLPANAVLDVRYEDLVADLEGQSRRL
                     LDYCEIPWNDACLAFHRNRRPVRTASATQVRQPLYANSVSRWHAFGDLAQPLLQALNG
                     EVRKA"
BASE COUNT          395 a          692 c          790 g          444 t
ORIGIN      
        1 cgatcacggt gcaaatcgtc atcgcggtgg tgttcggcgg ccgccgcacc atcctcggcg
       61 ccatcctggg ctctatcttc ctgattttgt tcgatgaatt gttgcgcccg ctggggcaac
      121 tcaacacctt cgtcgtctcg ggcatcgcgt tggcggtgat catgttcttc cccgacggcg
      181 tcctgggttg ggtgcttcgc ccgagggagc cgcgctgatg gacgaactgg cccagaccag
      241 cgcgcagatc accgctccac tgctggaggt cagcggcctg accaagcgct tcggcggcct
      301 ggtggcggtg cgcgatatag ggttcagcat ccgcccagga gagatccttg gactgattgg
      361 gccgaacggg tcggggaagt ctaccgtgat gcgcctggtg atgggcatcg agcggcccaa
      421 cgcgggaagt atcaggctgg cggggacgga gatcgcgggc tggccgacgc accagatcgc
      481 ccgcagcggc gttgggatcg tgttccagca ctcgcgccca ttgcatcgcc agtcggtgct
      541 ggagaacatc cggttggcat tgctgccgga ctcgctgtgg cgcctgatcg ccgagccgca
      601 tgtggaccgg cgcgcccgcg agatcgccga gcgcgtcggt ctggggcagg tgcttgaccg
      661 ccggcccgcg acgttgccgt tcgcggacct ccggcggctg gaaatggcga aagcgctggc
      721 gcgtaacccg aaggtcgtgt tgatcgacga accgttcgcc gggctcaccc agggcgaggt
      781 ggccaccttc tccgagctga tcgacgggtt ccgccgcgat ggccacgccg tgttgctggt
      841 cgatcacaac gtgaagagcg tcgccgcgtt ggtcgaccgg gtgctggcca tgtatctggg
      901 tgagcgcatt gccgagggca ccgccgacga ggtcatgcgc gacgaaaccg tgcgccgcgt
      961 ctacctgggc ggcaaaatcg aggcgcaccc gcgccggcaa ctggatgccg gtggcgaggc
     1021 gctgctggag gtgcgcgacg tcgacgtgct gtacggcaag gcgcaggcgc tgcgacaggt
     1081 ctcgatccac gtgaatgccg gagaattcgt ctccgtggtc gggctgaacg gcgccggcaa
     1141 aaccacgctg ttcaacgcga tctccggcct cgtgccgttt gacggagaga ttcggttcga
     1201 cggcgccaac ctgcgcggac gcacgccggc ggggattgct cgcggcgggg tcgtgcagtg
     1261 cccggagacg cgggaattgt tcggcgatct gagcgtgcgg gaaaacctcg atttgggcgg
     1321 tcagcatttg gcgacggagg cggcgcggca gacgcaactg gcgtggctgt tcgaattgtt
     1381 tccgatcctg aatgaacgcc agggccagaa tgctcgcaca ctgtccggcg gtgagcagca
     1441 gatgttggca atcgctcggg cattgatgat gcaaccaaag ctgttggttc tggacgagcc
     1501 taccctgggc ctggcgccgg tgatccttga gcaattgtcc aaggcgctta gccggttgcg
     1561 tgagaccacg ccgatcacgg tcttattggg cgagcaaaat gtgacctttg cgctgccgca
     1621 cgctgaccgg gtctatgtgc tggaacatgc ccgtatcgtc tgggagggcg atccgggaaa
     1681 attcgccgag gaaatgggca cgggctactt gtgatccgcg ctgtctttgc cgcttcttcg
     1741 acgacacgcc cgaggtcggg ataggcttgc ccgttgccag cccaaatgtt cgcctgacac
     1801 aggggtgacc cgtctcacag tatgcaggct ttcgagggtt gcgtcgggtt gtccggcgcc
     1861 gacccttatg catcggagac gggccaagga acagcgtgtc atatatattg gtcttgatgt
     1921 gcataaggag acgattgcgg tcgcagccga cactgaggga agccttcaat gcgccgacgg
     1981 cgacccagcg tttctctatg ccttccgaac ctcaccattc aatgcttgaa gcaacggctg
     2041 cgccaggtca ccgaacgcat gccagcggct caccgaattt gcgtacagag gctggcgcac
     2101 ttgtgtggca ctggcggttc tcaccgggcg gcgattccga tggaatgcca ggcaagcgtc
     2161 gttccaaggg atctcgcagt agtcgaggag acggcgggac tgcccttcca ggtcggccac
     2221 aaggtcttcg tacctgacgt ccagcacggc gttcgccggc aatacctgac gccaatgctc
     2281 catcaggtcg ctgtatgcgc gataataccg accaagttct g
//
LOCUS       DATAVD010000217         1554 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2997650, whole genome shotgun sequence.
ACCESSION   DATAVD010000217 DATAVD010000000
VERSION     DATAVD010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2997650"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VHX39_03985"
     CDS             complement(<1..186)
                     /locus_tag="VHX39_03985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990315.1"
                     /translation="MIDSSPGNVQSLPETVEELRALVLATFAERDAVVTERDTLLTQN
                     DRLRHLLLKLTRMHFGAR"
     gene            complement(196..522)
                     /gene="tnpB"
                     /locus_tag="VHX39_03990"
     CDS             complement(196..522)
                     /gene="tnpB"
                     /locus_tag="VHX39_03990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976048.1"
                     /note="TnpB, as the term is used for proteins encoded by
                     IS66 family insertion elements, is considered an accessory
                     protein, since TnpC, encoded by a neighboring gene, is a
                     DDE family transposase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HEX3990316.1"
                     /translation="MLATRPVDFRKGAHGLAALAQEVLTEDPFSGAVIVYRSKRSDRV
                     KILVWDTSGLVLIWKQLQEGSFRWPPIMDGVMKLSPVEFAALFDGLDWTRVQMTKGIL
                     KPTVAA"
     gene            complement(792..986)
                     /locus_tag="VHX39_03995"
                     /pseudo
     CDS             complement(792..986)
                     /locus_tag="VHX39_03995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611734.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            1095..1331
                     /locus_tag="VHX39_04000"
                     /pseudo
     CDS             1095..1331
                     /locus_tag="VHX39_04000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012881221.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(1247..>1554)
                     /locus_tag="VHX39_04005"
     CDS             complement(1247..>1554)
                     /locus_tag="VHX39_04005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990317.1"
                     /translation="RDEICHHHAAHGQRPGTALVHLANRRRDYPSPGPLCDDALATDG
                     FRASGRQHSVQDRVGAWIGCWWRLLVRLAYQRTRAEAGMPGRAMRLSTLHPIFASVF"
BASE COUNT          333 a          529 c          434 g          258 t
ORIGIN      
        1 ccgggcgccg aaatgcatcc gcgtcagctt caacagcaga tgccgcagcc ggtcattctg
       61 cgtcagtaag gtgtcccgct cggtgaccac agcatcgcgt tcggcaaagg tcgccagcac
      121 cagcgcgcgc aattcctcga cggtttcagg caggctctgc acgttgccgg gggacgaatc
      181 gatcatacac gaatcctatg cggcaacggt cggcttgaga atcccctttg tcatctgaac
      241 tcgcgtccaa tcgaggccgt caaacagcgc ggcgaattcc accggtgaga gcttcatgac
      301 gccatccata atcggcggcc agcgaaacga cccctcctgc agctgcttcc agatcagaac
      361 gaggccgctg gtatcccaga ccagtatctt gacacggtcg ctgcgcttgc tgcggtagac
      421 aatgaccgcg cctgagaaag gatcttcagt cagcacctcc tgcgccagcg cagcaagtcc
      481 atgcgcacct ttgcgaaaat caaccggccg cgtggccagc aagatccggg tgccggcagc
      541 aacgttgatc atgtccacga tgccgatgcc cgaaccgcgc gtaacactgc ggtcagctgg
      601 gccgcatcat ctatgccaga cacaacgcgc accacagcac cggccagctt gatctcgatc
      661 gccgggcctc ctgccgccgc cgcgcgcgga accggcgcag gtagcgtgat atcagtgggg
      721 atcggaacga agtcgggcgc tgccgcccca gttgtcctcg acaccacggc cgccacgttc
      781 cggcacgctg cacgtcgcca gccgaatacc tgctgcgaac aaacctgcca gcgccgagcc
      841 acctctgaca cgcgggcacc aggagccagg gtctcctcga caatccgcgt cttctcctcc
      901 gccgaccagc ggcggcgacg gcccggccct gtcagcatct caacccggcg gtattcaccc
      961 ttcgcgtcat cattaacgtc aaacataccg atagctcgat gccctctgcc tcgggcaact
     1021 caatcaccgt cagagcaggc attaaagaag gccgtcagag caccgcttac gttgcagatg
     1081 gaaccaaagc aacacagcgc gatcgacatc tggcaatgat tgacgcgcac gggcggatgg
     1141 cttggcaaca tcgctcaggt tacaaccgcc ggagtctggt tgaaacagcg atgtttcgct
     1201 acaagaccat catcggccgg aaacttcagg ctcgaacttt gtccaatcaa aagaccgagg
     1261 caaaaatcgg gtgcaatgtg ctcaaccgca tggcgcggcc tggcatgccg gcctccgccc
     1321 gggtccgctg atacgcgagc cggaccagga gacgccacca gcagccgatc catgcaccaa
     1381 cgcggtcctg aaccgaatgc tggcgaccgg acgcccgaaa tccgtccgtt gccagcgcgt
     1441 catcgcatag cggcccggga ctggggtaat ctcgccttct attcgccaag tgcaccaacg
     1501 ccgtaccggg gcgctggcca tgcgcggcat gatggtgaca aatctcatcg cgtt
//
LOCUS       DATAVD010000218         1935 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_20678, whole genome shotgun sequence.
ACCESSION   DATAVD010000218 DATAVD010000000
VERSION     DATAVD010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20678"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(272..1042)
                     /locus_tag="VHX39_04010"
     CDS             complement(272..1042)
                     /locus_tag="VHX39_04010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX3990318.1"
                     /translation="MPADQPGRFIAIASGKGGVGKTWLAITLSHALIRAGRRVLLFDA
                     DLGLANVDVQLGLTPVVDLGSVLSGRTDVAGAITRHGATGLDVLAGRSGSGALSELPA
                     ETLELLLTRLRLELSSYDAVVLDLGAGIDRIVRRFALWSDRLLVVATDEPTSLTDAYA
                     VLKLHTKDQPDGDVQIVVNQALSATAGEQTYATLRRACLAFLHREPPLAGVIRQDPKV
                     RDAIRRQTSLLLRHPNCAAAQDVETLARTCFTSRPTTD"
     gene            complement(1032..>1935)
                     /locus_tag="VHX39_04015"
     CDS             complement(1032..>1935)
                     /locus_tag="VHX39_04015"
                     /inference="COORDINATES: protein motif:HMM:NF012662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HEX3990319.1"
                     /translation="ATGPRMQLKLFRAAVMAEAMAQVRAALGPDALILNTRNIPGGIE
                     ITAALEPETEPAQTDPARLAALTWHGVPRELHPTMAHGNLEAAIAAALTFGELLFGPH
                     APPIMLTGPPGAGKTLTTVRLATRLVMRGTAPLVITTDGKRAGATEQLAAFTRLLGVP
                     LLVASHPVSLARALLQRTEGAPVLIDTAGADPREPAPAGELRGLAATAGADMALVLPS
                     GLDPAEAAELAVAHAECGATSLIVTRLDLAHRLGSVIAAAAASRLPLVEAGIGDGAAD
                     GLVPFTPSLLAARLSRLQGKPHAG"
BASE COUNT          332 a          657 c          638 g          308 t
ORIGIN      
        1 ttcatgagtt cgtcgacccg acggtccagt tcggcgccac gatagccgcg tgccgcaagt
       61 ttcccgcgaa acttgcggcg aaagaccgct ttggcgtctt ctgcaggaac gtcgtagtca
      121 agcatcagat tgctccgatc cgccggcagc atgcggtctg gcatagcacc tttggaaggc
      181 ggccacgagt actctccaca tcagatgcct ccgctgtgac gccgatcagc cggtccggtt
      241 gagcatttgc cccgcccgcg tccggcgtaa atcaatccgt cgtcggtcgc gatgtgaaac
      301 aggtccgtgc caacgtctct acgtcctgtg cagccgcgca gttcggatgc cgcagcaaca
      361 gggacgtttg ccgccgaatt gcgtcgcgca ccttcgggtc ctggcggatc acaccggcga
      421 gcggcggctc acggtgcaga aacgccagac aagctcgccg caacgtcgcg taggtttgct
      481 ccccggcggt cgccgacagg gcctggttga cgacgatctg cacgtcgccg tccggttggt
      541 ccttggtatg cagcttcagc acggcgtaag cgtcggtgag gctggtcggc tcgtcagttg
      601 ccaccaccag cagccggtcg gaccacaagg caaaccgccg cacgatccgg tcgatcccgg
      661 cgccgagatc gagcacgacc gcatcatacg acgacagctc caggcgcaag cgggtcagca
      721 gcaattccaa cgtctccgcc ggcagttccg acagcgcgcc cgagccggac cggccggcca
      781 gcacatccag cccggttgcc ccatgccggg tgattgcgcc cgccacgtcg gtccggccgg
      841 atagcaccga gccgagatcg accaccggcg tcaggccaag ttgcacgtcg acgttggcga
      901 gccccagatc ggcgtcgaac aacaacacgc gccgcccggc gcggattagc gcgtgcgaaa
      961 gggtgatcgc gagccaggtc ttgcccaccc cgcccttgcc cgaggcaatt gcgatgaacc
     1021 gcccaggttg gtcagccggc atggggtttt ccttgcaagc ggctcaacct cgcggcgagc
     1081 agcgaggggg tgaagggaac cagaccgtct gctgctccgt cgccgatgcc ggcctcgacc
     1141 agcggcaggc gggaggcagc ggcagcggca atcacactcc ccaaccgatg ggcgagatcc
     1201 agcctggtga cgatcagcga ggtcgcgcca cattcggcat gggccaccgc caactcggcc
     1261 gcctcggccg gatctaatcc ggaaggcagt accagggcca tatcggcgcc ggcggtcgcg
     1321 gcaaggccac gcagttcccc tgccggtgcc ggttcacgcg ggtcggcccc tgcggtatcg
     1381 atcagcaccg gcgcgccctc ggtccgttgc agcagggcgc gagccagact gaccggatgg
     1441 ctggccacca acaacgggac gccgagcagg cgggtgaatg cagcgagctg ctcggtcgcg
     1501 ccggcccgtt tgccatctgt ggtgattacc agcggagcgg tcccgcgcat gaccaggcgg
     1561 gttgcaaggc ggaccgtggt cagcgtcttg cccgcaccgg gcggacccgt gagcatgatc
     1621 ggcggcgcat gcggcccgaa cagcagttcc ccgaacgtca gggcagcagc gatcgcggct
     1681 tccaggttgc catgcgccat ggtcgggtgc agttctcgcg gcacgccgtg ccaggtcagt
     1741 gcggcaagac gggccgggtc ggtctgggcc ggctccgttt cgggttccag agctgcggtg
     1801 atctcaatac cgcctggaat gttcctggtg ttcaggatca acgcatccgg tcccagagcc
     1861 gcgcgcacct gcgccatggc ttcggccatg acagcagcgc ggaatagctt caattgcatt
     1921 ctgggacccg tggca
//
LOCUS       DATAVD010000219         6234 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_951584, whole genome shotgun sequence.
ACCESSION   DATAVD010000219 DATAVD010000000
VERSION     DATAVD010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6234
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_951584"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..563
                     /locus_tag="VHX39_04020"
     CDS             <1..563
                     /locus_tag="VHX39_04020"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3990320.1"
                     /translation="FAYFQDPFGGWYGIRDIPPPQPSSLFTTLDKVPYYYLALALLLI
                     TCTVIYRVSLSWFGNVLWSIRESDLLASSIGINVPGNKLIAFIVSAFFAGLAGSLYAT
                     YFGYISPLVFTFDYSVNVLIYIVVGGFSSFAGPILGAVALTVVPELFRVTGKYQNLLF
                     GLILIVSMLTMPNGLIGAWHRLVRKK"
     gene            560..1339
                     /locus_tag="VHX39_04025"
     CDS             560..1339
                     /locus_tag="VHX39_04025"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3990321.1"
                     /translation="MSAILELNGASRRFGGLIAVNDVSLSVEPGEIRGLIGPNGAGKT
                     TLFNLISGTLPPTSGRVQFEGSDVTGLPMHDLVRRGLVRTFQHAQLFPTFTVLRSILA
                     GLHVHARSGFWSGLFDPPAVRRHNDALATRAHEIIAFTGLTGREHELAGSLPHGFKRI
                     LQVAIGVAPKPRLLLLDEPVAGMNHQDVDRMMMLVRELRDRQGITIVLVEHNIRAVMN
                     VCDNISVLNFGRLIAEGSPSEVAADPGVIEAYLGAVDDDAA"
     gene            1332..2036
                     /locus_tag="VHX39_04030"
     CDS             1332..2036
                     /locus_tag="VHX39_04030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014189040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3990322.1"
                     /translation="MLELRALSVSYDTAEVLHGISLQVDIGETVTLIGANGAGKTSCL
                     RAISGLVPMSSGEVWFCGKRIDTLAPRRRVEMGLVQVPEGKRLFPRMTVRENLEMGAF
                     LRNDPASVQSDLASMFDRFPILHSRQKQHAGSLSGGEQQILAFARGLMARPRLLLVDE
                     PSVGLSPIMVKELSKALRTIHADGTAILLVEQNAAMALRLASRGYLLETGQCVADGPT
                     SELLANDYVRKAYLGV"
     gene            complement(2051..3115)
                     /locus_tag="VHX39_04035"
     CDS             complement(2051..3115)
                     /locus_tag="VHX39_04035"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEX3990323.1"
                     /translation="MPASYEKHRAQLKAILLSWGMPENNAETTSDILSWADLHGVDSH
                     GMSMVPGYDALRRRGRAKMDARPKIVKETPVSALVDGGGGLGHVPAHFAMGVAIDKAK
                     KVGMAIAAVNNSAHFGATGYYTLMAAKAGLIGMACTSASGIQVAPTFGKQARLGTDPW
                     SFAAPSADGVPFLLDMATTTVAAGRIRNKANEGLPTPDGWVLDSEGRPSNDPLVAREQ
                     GGFLTSLGGSPENSSYKGYGLSAMVNILGSCLSGATLITDPMHTKKAQGMDIGHFFMA
                     IDPGLFRDGDDFQKDVAQFCGDLRSTTPMDPARPVMVAGDPQWTYAKQRMAEGIPVGP
                     GLLSQVRQIAQASAAQWVLD"
     gene            3201..4025
                     /locus_tag="VHX39_04040"
     CDS             3201..4025
                     /locus_tag="VHX39_04040"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEX3990324.1"
                     /translation="MADAQALLKARFGMELPGVEVPDAIAPLLDRRVVRRYTDQAVPD
                     SLLDALLAAAQSAPAKSDLQQYSVVVMRNAAHIKQIADWIGTMDWIATAPVFLVWCGD
                     MRRGQRLCESHNMPHANNNLDTFLNTAVDCSLAMAQFMMAAEAVGLGTCPISYVRSHI
                     ERVSPLLALPSGVYPVAGLTVGWPVFRRPTSMRLPPSIVVHRERYDDSALERETAAYD
                     ARRREREPKAPGSLKNTDIYPPREGVGWSEDVARQLSVPERFGFAAYLRTKGFDLA"
     gene            4018..4671
                     /locus_tag="VHX39_04045"
     CDS             4018..4671
                     /locus_tag="VHX39_04045"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEX3990325.1"
                     /translation="MPEDLHHHATLVDQRESQRPKTVRARHAASLLVWRAAVETTEIL
                     MGMRGARHRFMPNRLVFPGGAVDRADLSAPFVTGLSHRTEAALRRNANAKLAHGLGVA
                     AARELMEETGLSLGFPPALDGLDYLARAVTPTDSPIRFNARFFCIHASRVTGTLGGDG
                     ELDNLRYYGMTEALALDLAGPTRRMLEQLRTWLTLSDAEREKRTHVPVLKDRGWRLE"
     gene            4784..5443
                     /locus_tag="VHX39_04050"
     CDS             4784..5443
                     /locus_tag="VHX39_04050"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEX3990326.1"
                     /translation="MMTLTVRFVLIVVSSGAWVALAVIGRGGPAEFFSHTPLIALTCA
                     VGVLIIGSMFAGGNLSPGVQEDRNNRWVIAAFVLVGVLDGFLPAWADRNEFWIIDGET
                     IRWIGVVLFAVGGALRLWPVYVLGNRFSGLVAIQPDHTLETRGIYCFIRNPSYLGAIV
                     MTLGWGLAFRTGIGIVLTVLLIPPLIARMDAEEALLSAQFGKEYDAYRARTSRLIPWI
                     W"
     gene            complement(5447..>6234)
                     /locus_tag="VHX39_04055"
     CDS             complement(5447..>6234)
                     /locus_tag="VHX39_04055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3990327.1"
                     /translation="IMPGISRIVANNPGPMTYYGTNTYLIETEQGTVILDPGPEDHPE
                     HVEAIMRHTGGQVALILISHTHQDHVGAAEELKQKTGARTAGFKTSGLDSFNADIKLS
                     NGETIAGMAAVHTPGHALDHLCFSVRSRNGDKVLFSADHVMSWSTSVVSPPGGDMKDY
                     FNSLEVLLRRDDDVYLPGHGPALRDPRDLVRAMLAHRVMREHAIAEKLKEGAASTYTL
                     MDTLYSQVNPRLRRAAERNVLAHLLKMEIEGKVARDGENWRAA"
BASE COUNT         1155 a         1850 c         1867 g         1362 t
ORIGIN      
        1 tcttcgcgta ttttcaagat ccgttcggcg gctggtacgg gatccgggac attcctccac
       61 cgcaaccgtc ctcgctgttc accacgctgg acaaagtgcc gtattattac ctggcgttgg
      121 ctctgctgct gataacttgc accgtcattt atcgcgtcag tttgtcctgg ttcggcaacg
      181 tgctttggag tatccgtgaa agcgacctcc tggcgagttc cataggtatc aacgttccag
      241 gcaacaaact gatcgccttt atagtatcgg cgttcttcgc cggtctggcg ggcagtttat
      301 acgccacgta ttttggctac atcagtccgc tggtgttcac attcgactat tccgtaaacg
      361 tcctgatcta catcgtggtc gggggcttca gttcgtttgc cggtcccatc ctgggcgccg
      421 tcgcgctgac ggtggtgccg gaactgtttc gggtcaccgg caaatatcag aaccttttgt
      481 tcggactgat cctgattgtc tcgatgttaa caatgccgaa cggtctgatt ggtgcgtggc
      541 accggttggt gcgaaagaaa tgagcgcgat tctggagctc aacggcgcct cgagacggtt
      601 cggcggtctg atcgccgtca acgacgtctc attgtccgtt gaaccaggcg aaatccgtgg
      661 gctgatcggg ccgaacggcg cgggcaagac cacgcttttc aatttgatca gtggcacgct
      721 tccgccgacc tccggccggg tgcagttcga gggcagcgat gtcaccggcc ttccgatgca
      781 cgatctggtg cgccgcggcc tagttcggac cttccaacac gctcagttgt ttccaacctt
      841 taccgtttta cgcagtatcc tcgctggtct gcacgttcac gcacgctccg gattctggtc
      901 cggattgttc gacccgccag cggtaaggcg gcacaacgat gcgctggcca cgcgcgcaca
      961 tgagatcatc gcatttaccg gcctgacggg ccgcgagcat gagttggcgg gcagcctgcc
     1021 gcatggcttc aaacggatcc tgcaggtggc gattggggtg gcaccgaagc cgcgactgtt
     1081 gctgctggat gagccagtgg ccggaatgaa ccatcaagat gtcgatcgca tgatgatgct
     1141 ggtgcgcgag ttacgtgacc ggcaaggcat taccatcgtc ttggtagaac ataacattcg
     1201 cgccgttatg aatgtctgcg ataatatcag cgtgctgaac ttcggacgat tgattgccga
     1261 aggttcaccg tccgaggtcg cggcggatcc cggcgtgatc gaagcctatc tgggcgcggt
     1321 ggatgacgat gctgcttgaa ctccgtgcgc tgagcgtcag ttatgacacc gccgaagtgc
     1381 tgcatggcat ttctttgcag gtagacattg gtgaaacggt cacgctgatc ggcgccaacg
     1441 gagccggcaa gacatcgtgc ctgcgggcga tttcaggcct cgtgccaatg tcctccggcg
     1501 aagtgtggtt ttgcggcaaa cgaatcgaca cactggcgcc gcgccgtcgc gtggaaatgg
     1561 ggctcgttca ggttcccgag ggcaagcgct tgttcccacg catgaccgtg cgcgaaaacc
     1621 tggagatggg cgcgttcctt cgcaatgacc cggcgtcggt acaatccgat ctggcttcca
     1681 tgttcgatcg atttcctatc ctgcactccc gccagaagca gcatgccggc agcctgtccg
     1741 gcggcgaaca acagattctt gcgtttgccc gaggcctgat ggcgcgacct cggttgttgt
     1801 tggtggacga gccatcggtc gggttgtcac cgattatggt gaaggaatta tcgaaagctc
     1861 tgcggaccat tcatgcggat ggcaccgcca ttttgttagt ggaacagaat gccgccatgg
     1921 cactccgtct ggccagccgt gggtatttgc tggagaccgg ccagtgtgtc gccgatgggc
     1981 ccaccagcga gttgctggcg aatgattacg tgcgcaaggc ctatttgggc gtttgacgga
     2041 ggcgtgggtg ctaatccagc acccactgag ccgccgaggc ctgcgcaatc tgccgtactt
     2101 ggctcaacaa tcccggtccg accggaatac cctccgccat acgctgtttt gcataggtcc
     2161 attgcggatc gccggccacc atcactgggc gagccgggtc catcggcgtc gtcgaccgca
     2221 aatcgccaca aaattgtgcc acgtctttct gaaagtcgtc accatcccgg aacagacccg
     2281 ggtcgatcgc catgaagaaa tggccgatat ccataccctg cgccttcttc gtatgcatcg
     2341 gatcggtgat cagcgttgct cccgacaggc aggacccgag aatattcacc atcgccgaca
     2401 ggccatatcc cttatagctg gaattctccg gcgatccgcc caacgaggtc aggaatccgc
     2461 cttgttcccg cgcaaccaac gggtcgttac tcggccggcc ctcgctgtcg agtacccaac
     2521 catctggggt cggcagtcct tcattggctt tgttccgaat tctgcccgct gccacggtcg
     2581 tcgtcgccat gtccaacagg aacggcaccc catcggcact gggcgcggca aaagaccagg
     2641 gatcggtgcc cagacgcgcc tgcttgccga aggtcggcgc cacctgaata ccggatgctg
     2701 aggtgcacgc catcccaatc agccccgctt ttgcggccat tagcgtgtag tacccggtcg
     2761 cgccgaaatg cgccgaattg ttgacggctg ctatcgccat tccgaccttc ttcgccttat
     2821 cgatcgccac gcccatcgcg aaatgcgccg gtacgtggcc aaggccgccg ccgccatcga
     2881 ccagggctga caccggcgtc tccttcacga ttttcgggcg cgcgtccatc ttcgcccgac
     2941 ctcggcggcg cagcgcgtca taaccgggaa ccatcgacat cccgtgactg tcgaccccgt
     3001 gcaggtcagc ccaggaaagg atgtccgagg tggtctcggc gttattctcg ggcatgcccc
     3061 aggacagcag aatggctttc aactgggcgc ggtgtttttc ataggatgca ggcatgggtt
     3121 ccctccgtct ggccgcaacc ttgcgcgatc caggggttcc ggcaagtgtg acctgaggca
     3181 agaaaaggag gacacaggtc atggccgatg cacaggcgct gctcaaggcc cgcttcggga
     3241 tggaactgcc cggagttgag gtgccggacg cgattgcccc actgctcgac cgccgggtcg
     3301 tgcgccgata cactgaccaa gcggtcccgg attcactgct ggacgcactt ctggccgctg
     3361 cacaatcggc gccggcgaag tcggatttgc aacaatactc cgtcgtggtg atgcgcaacg
     3421 cagcgcatat caagcaaatt gccgactgga tcggcaccat ggactggatc gccaccgcgc
     3481 cggtatttct ggtctggtgc ggcgatatgc ggcgcggtca gcgcctgtgc gaatcgcaca
     3541 acatgccgca cgccaacaac aatcttgaca ccttcctcaa cactgccgtc gattgttcgt
     3601 tggcaatggc ccagttcatg atggcggccg aggcagtggg ccttggcacc tgccctattt
     3661 cgtacgtacg cagccacatt gagcgtgtgt caccactgct tgcattaccc tccggcgtct
     3721 atccggtggc cggacttact gtcggatggc cggtgtttcg ccggccgact tcgatgcgtc
     3781 tgccgccatc gatcgtcgtg cacagagaac gttacgatga cagcgcgctg gagcgcgaga
     3841 ctgccgctta cgatgctcgc cgacgggaac gcgaacccaa ggcgccgggc agcctgaaga
     3901 acactgacat ttacccaccg cgcgaaggag tgggatggag cgaagacgtt gcgcgccagt
     3961 tgtcggtccc ggaacggttt ggcttcgccg cttacttacg aacgaaagga ttcgatcttg
     4021 cctgaagacc tccaccacca cgccacgctg gtggatcaac gcgagtcgca acggccaaaa
     4081 accgtacgcg cgcgtcatgc cgccagcctg ctggtctggc gcgcggctgt agagacgacg
     4141 gaaatcttga tggggatgcg gggcgcccgc catcgtttca tgcccaatcg gctggtgttt
     4201 cccggtggag cggttgatcg ggccgatctc tctgcgccat tcgtcaccgg actgtcacat
     4261 cgcaccgaag ccgcacttcg cagaaacgcc aacgcaaagc tcgcccatgg tctcggcgtc
     4321 gctgccgcac gcgagctaat ggaagaaacc gggctttccc tcggatttcc gcccgctctt
     4381 gacgggttgg actacctcgc gcgggccgtc acgccgaccg acagcccaat tcgtttcaac
     4441 gctcgtttct tttgtatcca tgcctcacga gtcaccggca cgttgggcgg cgacggtgaa
     4501 ctggacaatt tgcgttacta tggcatgaca gaagcgctgg cgctcgacct cgctgggccg
     4561 acacggcgga tgctggagca attgagaacg tggttgacct tgagcgacgc ggagcgagag
     4621 aaacgcaccc acgtcccggt gctgaaagac cgtggctggc gcctggagtg atgcgagcac
     4681 ggaacacgga acaatcgtgg atttccggcg ttgcacagat tgtgaacgtg agttggtccg
     4741 gtccttttga attggtcggg ggagaagcag gcgggagtgt cggatgatga cgctgaccgt
     4801 ccgctttgtg ctgatcgttg taagcagcgg cgcgtgggtc gctttggcgg tcattggccg
     4861 tggcggtccg gcagaattct tttcccacac accgctgatc gcgcttactt gtgcggtggg
     4921 cgtactgatc atcggttcaa tgttcgccgg gggaaattta agccctggtg tgcaggaaga
     4981 tcgtaataat cgctgggtca tcgctgcatt tgtgctggtg ggcgtgctcg atggcttttt
     5041 accggcatgg gcggaccgca acgaattctg gattattgat ggcgaaacca tccgctggat
     5101 tggcgtcgtc ctgttcgccg tcggcggtgc attgcggctc tggccggttt acgttctggg
     5161 caatcggttc agcggcctgg ttgccatcca gcctgaccac acgttggaaa cccgaggcat
     5221 ttattgtttc atccgaaacc ctagctatct gggtgcgatt gtgatgacgc tcggctgggg
     5281 cctggcgttt cgaaccggta tcggcatcgt gctcacggtg ttgctgattc cgccgttgat
     5341 tgctcgcatg gacgcggaag aagcgttgct gtcggcacag tttggcaaag agtacgacgc
     5401 ctaccgggct cggacatcgc gcctgatccc ctggatttgg tagcgcctag gctgcccgcc
     5461 agttttcgcc gtcgcgagca acctttccct caatttccat cttcagcaga tgcgcgagaa
     5521 cgttacgttc cgccgcccgg cgaagccttg gatttacctg cgagtaaagc gtatccatga
     5581 gcgtatatgt gctcgccgct ccttccttca gtttctccgc gatggcatgt tcacgcatga
     5641 cccgatgagc gagcatggcg cgaaccaaat cccgagggtc acgcagcgcc ggaccgtgac
     5701 caggcaaata aacatcgtca tcacgccgca acagaacttc gagactgttg aaataatcct
     5761 tcatgtcgcc gcccggcggg ctgaccacgc tggtcgacca ggacattaca tggtctgcac
     5821 tgaacagcac cttatcaccg ttacgggaac gcactgaaaa acacagatga tccagcgcgt
     5881 ggcccggtgt atgaaccgct gccatgccgg caatcgtttc gccgttgctg agcttgatat
     5941 ccgcattgaa ggagtcgaga ccggaggtct tgaatcccgc agtgcgggca ccggtcttct
     6001 gcttcagttc ttcggccgcg ccgacgtgat cttgatgcgt atggctgatc aggatcaagg
     6061 caacctggcc gccggtgtgg cgcatgatcg cctcgacatg ttccgggtga tcttccgggc
     6121 cgggatcaag aattacagtg ccctgctcgg tttcgatcag gtaggtgttg gtgccataat
     6181 aggtcatcgg tcccgggttg ttcgccacga tgcggcttat tccgggcatg atgg
//
LOCUS       DATAVD010000220         1726 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1323364, whole genome shotgun sequence.
ACCESSION   DATAVD010000220 DATAVD010000000
VERSION     DATAVD010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1323364"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..143)
                     /locus_tag="VHX39_04060"
     CDS             complement(<1..143)
                     /locus_tag="VHX39_04060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003630976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEX3990328.1"
                     /translation="MQRIFSGIQPSGIPTLGNYLGALRNWAALQNGHECIYCVVDLHA
                     ITV"
     gene            397..648
                     /locus_tag="VHX39_04065"
     CDS             397..648
                     /locus_tag="VHX39_04065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990329.1"
                     /translation="MRAISILVVAVTVLAGCGTNQPDRSTGGAATGAGTGAVIGLLGG
                     PVGVGVGALIGAGVGAGAGAALSPGHINLGTPVWSDHNP"
     gene            complement(682..1116)
                     /locus_tag="VHX39_04070"
     CDS             complement(682..1116)
                     /locus_tag="VHX39_04070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX3990330.1"
                     /translation="MTIAAILKHKGHTVITIEPTATVPEIAARLADHRIGAVLVMDRA
                     EQVLGIVSERDIVRSIATNGARTLEMTAGQLMTRAVHVAHPDMTVEEAMRKMTLARIR
                     HLPVMHNDDLVGMVSIGDVVKSRIMRQDTEVDSLRAYIGSAA"
     gene            1412..>1726
                     /locus_tag="VHX39_04075"
     CDS             1412..>1726
                     /locus_tag="VHX39_04075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HEX3990331.1"
                     /translation="MSFRSLYQHGFVRVAACTTRTALADPATNAATILEMARSCHAQG
                     AALAVFPELGVSGYAISDLLQQTALLDAVEAAVATIVAASSELLPLLMVGAPIRHQGA
                     LYN"
BASE COUNT          279 a          537 c          555 g          355 t
ORIGIN      
        1 aacacggtga tcgcgtgcag gtcgacgacg cagtaaatgc actcgtggcc attctgcaaa
       61 gctgcccaat tgcgcagcgc ccccagatag ttaccgaggg tcgggatacc ggagggctga
      121 atgcccgaga aaatgcgctg catgaacgtt gatccctggc gtcgatcccc ctggggacca
      181 tggaccgtat ggcgtggcag cggacagatg gacgaacacc gcccgccatg caacccggct
      241 ccacgcgtgg cagcccgtag ttcaccactt gttgccgggt tcgtgcttag cgagccgggt
      301 catggatgcg cgcgtgatga cgcattgttc atctacgcgg gtgcccgcga atccatttcg
      361 cctggtaatg caacccgtct ctatgggagg ctacctatgc gtgcaatttc gatccttgtc
      421 gttgcggtca ccgttttggc gggttgcggc accaatcaac cggaccgctc aaccggcggt
      481 gcagccaccg gcgcaggcac cggtgcggtc atcggacttc tgggcggacc tgttggcgtc
      541 ggcgtgggcg ccctgatcgg tgccggagtg ggagccggcg cgggtgccgc tctctccccc
      601 ggtcacatca atctgggcac gccggtgtgg agcgatcata acccctgatc ggcacgccgg
      661 gtttgccaaa cgaacggtgc ctcaggccgc gctgccgata taggcgcgca ggctgtcgac
      721 ctcggtgtcc tgtcgcatga tgcgcgactt aacgacgtcg ccaatgctga ccatgccgac
      781 aaggtcgtca ttgtgcatca ctggcagatg acgaatgcgt gccagggtca ttttccgcat
      841 ggcttcctcg acagtcatgt cgggatgggc cacatgaacc gcccttgtca tcagttggcc
      901 ggcggtcatt tccagcgtgc gagccccatt ggtggcgatg ctgcgcacga tatcgcgctc
      961 gctgacgatg cccagtacct gttcggcacg gtccatgacg aggacggcac caatccggtg
     1021 gtcggccagc cgggcagcga tttccggcac cgttgcggtg ggctcgatcg tgatgaccgt
     1081 atgaccttta tgtttcagaa tcgccgcgat cgtcatgctc cgtcctcctt tgtcgggggt
     1141 ggcaaacgcg gggacggcga tccggtcgga tgtcgtgagg cgaggctcgg attccggccc
     1201 gcgcggtatt gattaatgca agcttacacg catcggttga ccggccgcaa ccggctctcc
     1261 gtgcggtgca ccatgagctt ttctgccatg atgacggtct cgcgttgatc tcggtcatgc
     1321 cggccttgtc ccgcggcctc tgtcccgctg ggttcactca agctcgcgtc acatggcaaa
     1381 acgccgtggc ccgtggcatg ctggcgggat catgagcttt cgctccctgt accagcatgg
     1441 atttgtcagg gtcgcggcct gcacgacgcg gactgccctg gccgacccgg cgaccaacgc
     1501 tgccaccatc ctcgagatgg cgcggtcgtg tcacgcgcag ggtgccgcgc tggcggtgtt
     1561 tcccgaactc ggtgtatccg gctacgcaat cagcgatttg ttgcagcaga cggcgctgct
     1621 ggacgcggtc gaggcggccg ttgcaaccat cgtcgccgcg tcgtccgaat tgttgccatt
     1681 gctgatggtt ggggcgccga tccgtcatca gggcgcgctg tacaac
//
LOCUS       DATAVD010000221         5070 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_393343, whole genome shotgun sequence.
ACCESSION   DATAVD010000221 DATAVD010000000
VERSION     DATAVD010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5070
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393343"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VHX39_04080"
     CDS             complement(<1..416)
                     /locus_tag="VHX39_04080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3990332.1"
                     /translation="MSDNAGTPPDSAPEDGDAYDAASISVLRGLDAVRRRPGMYIGDT
                     DDGSGLHHMAFEIIDNAVDEVQAGYATKVELTLNGDGSVTVRDDGRGIPIDIHLEEGI
                     SAAEVVLTRLHAGGKFNQNSYKVSGGLHGVGAAVVNA"
     gene            complement(460..1677)
                     /gene="recF"
                     /locus_tag="VHX39_04085"
     CDS             complement(460..1677)
                     /gene="recF"
                     /locus_tag="VHX39_04085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HEX3990333.1"
                     /translation="MPLPPPRVRCHVPHVLRLHRLILTDFRNYATLTWQPRASVSVLI
                     GPNGSGKTNLLEAVSLLVPGRGLRGARGTDLPRRDGPGNWAVAGRFSTVLGQTDIGTG
                     TAPDGSSDRRVFRLDGTAPRNQTEIASRAAAVWLTPRMDRLFQEGASGRRRFLDRLVW
                     ALDAGHAREVAAHDGAMAQRNRLLAEGRAEAAWLAGLEDAMARHGVAATAARLALVRR
                     LNDLPPANGGMGHAEFPAAQIGLVCGIADRLAVSPALEVEDWLRTTLAENRRRDAASG
                     TAAVGAHRADMVLTDAATRTESALASTGQQKALLIGLILSHARLVAEARGFAPLLLLD
                     EPAVHLDEARRASLFQALCSTPAQVIVTGTDAETFRPLADQAEAWRVDAGELHREKGF
                     LIGSPLSSGFATC"
     gene            2011..3699
                     /locus_tag="VHX39_04090"
     CDS             2011..3699
                     /locus_tag="VHX39_04090"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX3990334.1"
                     /translation="MTGRRRLRSLVLTFALLSATGFYARSWAQNTADVIDQTAMAIPR
                     IGMPGARSIALPQPLSPGDVARVRQIFAEQRSGDIADASREMEHLDSDMLRGAILADR
                     YLGTGYIPDAAELSVWLARYGDQPDAPAIRALLEMSPEPFAKAPAGPPLASPGAAKAR
                     RGQSAGTPRALLAQNDDQAAVNAALALLAGSPGAPTADAIFAGGVAAWREHNLAVAKA
                     LFEGAWRGADTASLRAAAAFWTARLAERMRDRGGRIFWLRRAARETDTFYGPIARHAL
                     NPIISCLPLIAAGKPVLTNVDVDALMETAAGRRSFALLQVGERARAEAELRTLWLDSG
                     PRPALGRSLILVAKAVGLNQFAAELRNDTDAAEAALGRFELPLLRPAGGFRLDPAFVY
                     AMVRHESNFQPLAVSPVGARGLMQVMPATAVGMGAIGEGQTDRLNDPATNLAVGQTYV
                     LQLSKNPLVGDDLLKLIAAYGEGPAGMSHWAETIRSHDDPFTFLEAIPVPFMRQFVED
                     VLVYQWQYAAALRLRASSLDDLAAGIYPRFTPIKTAPGGTRAQPESCPVLAAGE"
     gene            3766..4509
                     /locus_tag="VHX39_04095"
     CDS             3766..4509
                     /locus_tag="VHX39_04095"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3990335.1"
                     /translation="MNLTNKVAVVTGASGGIGAPTARRLAEAGARVIVGYNGKSAEAN
                     KIAAALPGTGHRAMRIPMLETNVIREVAATVEREFGRCDVLVNSAGFTRMVPHHDLEA
                     LDDDLIDAIFAANVRGPFATIRAFAPLLKKSGDAVIVNISSIAAITGTGSNIAYGGSK
                     AALDTMSLSLARVLGPEIRVFTVSPAAVDTAFVPGRTTAMVERVAATTPLKRVVQADE
                     VAQAVMAAITLLTSTTGIVIPVDGGKLVG"
     gene            complement(4633..>5070)
                     /locus_tag="VHX39_04100"
     CDS             complement(4633..>5070)
                     /locus_tag="VHX39_04100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990336.1"
                     /translation="LPVADIREMIDDDREMAMQGLLVQLRAAEAQLRERAHAVRKATL
                     DLATTSRDLAETTDTLAATRHDLDDARAMLQQTNRTLDQTRATLHCTEARFNATSADL
                     TTTRQELERVGNSGRLFIRQYLPKLRRHLSRQILRRSRSAAEP"
BASE COUNT          926 a         1609 c         1608 g          927 t
ORIGIN      
        1 gcgttgacca ccgccgcgcc gactccatgc agcccgccgg agactttgta ggaattctgg
       61 ttgaatttgc cgcctgcatg caatcgtgtg agcacgactt ccgccgccga aatcccctct
      121 tccaaatgga tgtcgatcgg aatgcctcgc ccgtcgtcac gcaccgtgac actgccgtcg
      181 ccattcaggg tcagttcgac cttcgtggcg tatccggcct ggacctcatc gaccgcgtta
      241 tcgatgatct cgaacgccat atgatgcagg ccagagccgt catccgtatc gccgatatac
      301 attcctgggc ggcgccgtac ggcatccaac cccctcagga ccgaaatcga cgcagcgtcg
      361 taggcatcgc cgtcctcggg cgcagaatcg gggggtgttc cggcgttgtc tgacatgccg
      421 acgagggact cctgcaggtg ttctgagtac tatagactct tagcacgtag cgaagccgga
      481 ggacagagga gacccgatca aaaacccctt ttcacgatgc aactctccgg catccacgcg
      541 ccatgcctca gcctgatccg cgagcggacg aaacgtctct gcatccgttc ccgtaacgat
      601 cacctgggcc ggcgtgctgc acagagcctg gaacaggctg gcccgacgcg cctcgtccaa
      661 atgcaccgcc ggttcatcca gcagcagcaa aggggcaaag cctcgcgcct cggcgacgag
      721 ccgcgcgtgc gacaggatca ggccgatcag caaggccttc tgctgcccgg tgctggcaag
      781 ggcggactcg gtccgggtcg ccgcgtcggt caacaccata tccgctcggt gcgcaccgac
      841 tgccgcagtg cccgaggcag cgtcgcggcg gcggttctcc gccagggtgg tacgcagcca
      901 gtcctcaact tccaaagccg gtgacaccgc cagccgatcg gcaatcccgc ataccaggcc
      961 gatctgagca gccgggaact ccgcatggcc catcccgcca ttagctggcg gcaggtcgtt
     1021 cagccgccgt accagggcca gccgggcggc cgtggcggcc acaccatggc gtgccatggc
     1081 atcctccagg ccagccagcc aggccgcctc ggcgcgtcct tcagccagca agcggttcct
     1141 ctgggccatg gcaccgtcat gcgcggcaac ctccctggcg tggccggcat ccaaagccca
     1201 caccagacga tcgaggaaac gccggcgccc tgacgcaccc tcctggaaca aacggtccat
     1261 tctgggagtg agccagacgg cggccgcccg gctggcgatc tcggtctgat tgcgaggcgc
     1321 cgtgccatcc agccggaaca cgcgccgatc gctggacccg tccggcgctg tgccggtgcc
     1381 gatatcggtc tggcccagta ccgtcgagaa ccgtcctgcg accgcccaat taccaggccc
     1441 atcgcggcgc ggcaggtcgg ttccccgcgc accccgcaag ccgcggccag gaaccagcaa
     1501 cgacacagct tccagcaggt tggttttgcc ggagccatta gggccaatca gcacgctgac
     1561 cgatgcgcgc ggttgccagg tcagcgtcgc ataattgcgg aagtcggtca ggatcagacg
     1621 atgcaggcgt aacacatggg gaacatggca gcggacccga ggcgggggaa gaggcacgca
     1681 accgcgactc gggcagcgtc aggtgtgcac gcggtgagga ttctgccgga gcaacacgaa
     1741 aaaccgagtg ggacgaaaaa aaatttcagc ccgttccgaa ctttcggctg aacagaacgg
     1801 gggttgcgat tgtgtggata tcttctgtcg aaaaccatgt attccagtaa ctttcgggca
     1861 gttgtggcca ccgtgactta tgttgaaacc gttaggaaac catgaaccgt aatcaccctg
     1921 gtttcgccca cagtgctggc gagatgagtt tggagtcttg ccacaatacg actgagccat
     1981 tattcgcgaa tgatgcacag gagacgcccc atgacgggac gccgccggct gcgatcactt
     2041 gtcttgacct tcgccttgct ttcggcgacg ggcttttacg ctcgaagctg ggcgcagaac
     2101 accgcagacg tgatcgatca gaccgctatg gcgatccccc gcattggtat gccaggcgcg
     2161 cgtagcattg cgttaccgca accactttca cccggggatg tggcccgcgt caggcaaatc
     2221 tttgccgaac aacgcagtgg cgacatcgca gatgcctcca gggaaatgga acacctcgac
     2281 agcgacatgc tgcgcggtgc catcctcgcc gaccgttatc tcggcacagg ttacataccc
     2341 gatgcggcgg agctttcggt ctggctcgca cggtatggcg accagcctga tgcgccggcg
     2401 atccgggcgt tgctggagat gtcaccggaa ccctttgcca aggcaccggc tggcccgccc
     2461 cttgcgagcc caggagcggc aaaagcgcgg agagggcaaa gtgctggtac gccgcgcgca
     2521 ctgttggcgc agaacgatga tcaggcggcg gtgaatgccg cgcttgcgtt gctcgccggc
     2581 tcgcctggcg caccgaccgc ggatgcgatt tttgccggag gcgtggctgc gtggcgcgag
     2641 cacaatctgg ccgtcgccaa agcactgttc gagggcgcct ggcgcggcgc cgacactgca
     2701 tcactacggg ctgccgcggc attttggacc gcaaggttgg ccgaacggat gcgtgatcgc
     2761 ggcggccgga tcttctggct acgccgggcc gcccgcgaga ccgacacgtt ctatggccca
     2821 attgctcgcc acgcattgaa cccgattatc tcttgcctgc ccttgattgc tgccggcaaa
     2881 ccggtgctca ccaacgtcga tgtcgatgct ctgatggaga ccgcggccgg ccggcgcagt
     2941 ttcgcattgc tccaggtcgg ggaacgcgcc cgtgccgaag ctgaattgcg tactttgtgg
     3001 ctggattcag ggccgcgacc agctttgggc cgctcgctga tcctggtggc caaagccgtc
     3061 gggctcaatc agtttgccgc tgaacttcgt aacgataccg atgcggccga agcggctctt
     3121 ggcaggttcg agctaccgct gttgcggccg gccggcgggt tccgtttgga cccggccttc
     3181 gtctacgcga tggtgcggca cgagtcgaac tttcagccgc tcgccgtttc gccggtcggg
     3241 gcgcgcgggc tgatgcaggt catgccggca accgccgtcg ggatgggagc catcggcgag
     3301 gggcagacag accggctgaa cgatccagcg accaacctcg ccgtcgggca gacctatgtg
     3361 ctgcagctca gcaaaaatcc gctggtcggg gacgatttgc tgaaactgat cgcggcatac
     3421 ggtgagggcc cggccggcat gagccattgg gccgagacga tccggtcgca cgacgatccg
     3481 ttcacctttc tggaagcgat ccccgtcccg ttcatgcggc agttcgttga ggacgtgctg
     3541 gtctatcaat ggcaatacgc tgccgcacta cgattgcgcg ccagcagtct ggatgatctc
     3601 gcggccggca tctatccgcg gtttaccccg atcaagaccg cgcccggtgg cacgcgggcg
     3661 caaccggaga gttgtcccgt tttggccgcc ggcgaataat ccgggtcgct ggcgatggcg
     3721 gcagacaccc gatagactga cacaagccaa atcgggagac gccgcatgaa cctgaccaac
     3781 aaagtcgctg tcgtgaccgg tgccagcggt ggcatcggcg caccgaccgc acggcgcctc
     3841 gccgaagcag gggcccgcgt cattgtcggc tacaacggca aatcggccga ggccaacaag
     3901 attgccgcgg cactgcccgg taccggtcat cgcgcgatgc gaatcccgat gctggaaacc
     3961 aatgtcatcc gtgaggtcgc cgcgacggtc gagcgcgagt tcgggcgatg cgacgtgctg
     4021 gtgaactctg ccggtttcac gcgcatggtg ccgcaccatg atctggaggc gctggacgac
     4081 gatctgatcg atgcgatttt cgcagccaac gtcagaggac cctttgcaac gatccgcgcc
     4141 tttgcaccgc tgctgaaaaa gtcgggcgat gcggtgattg tgaatatttc atcgatcgcc
     4201 gccatcaccg ggaccggcag caacatcgct tacggcgggt cgaaagcggc gctggatacg
     4261 atgtccctgt cgctggcgcg cgtgctcggc ccggaaattc gggtgttcac cgtctcgccg
     4321 gccgccgtcg atacggcttt cgtgccgggc cggaccacgg cgatggtgga gcgggttgct
     4381 gccaccacgc cgttgaaacg ggtggtccag gccgatgagg tcgctcaggc ggtaatggcg
     4441 gcgatcacgt tgctgacgtc gaccaccgga atcgtcattc cggttgacgg tggcaaactg
     4501 gtgggctgat cccgttctga ggccaggatt attggcttta tgaattgaac gcccgccgtg
     4561 cgcgatattg ccgatccatg ggcaatcgcc gcgggattgt gccggaattg caatgttatc
     4621 cgacggaagc cgttatggtt cggcagcaga ccttgaccgt ctcagtatct gtcgcgacag
     4681 atggcgccta agcttcggca aatattggcg gatgaacaaa cggcccgaat tgccgacccg
     4741 ctcgagttcc tgccgggtcg tggtgagatc ggccgaggtc gcgttgaacc gcgcttcggt
     4801 gcagtggagg gtggcgcggg tctgatcgag cgttcggttg gtctgctgca gcattgctct
     4861 tgcgtcatcg agatcgtgac gcgttgctgc cagcgtgtcg gttgtttcag caaggtcacg
     4921 actcgtggtg gccagatcga gggtggcctt gcgtacggcg tgggccctct cgcgcagttg
     4981 agcttcggcc gcccgcaact gcaccaacaa cccctgcatg gccatttccc ggtcatcatc
     5041 gatcatctcg cggatatcgg ccactggtaa
//
LOCUS       DATAVD010000222        12521 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2068306, whole genome shotgun sequence.
ACCESSION   DATAVD010000222 DATAVD010000000
VERSION     DATAVD010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 12521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12521
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2068306"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2229)
                     /locus_tag="VHX39_04105"
     CDS             complement(<1..2229)
                     /locus_tag="VHX39_04105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013641111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maltotransferase domain-containing protein"
                     /protein_id="HEX3990337.1"
                     /translation="MLLSLPRHLGTADIATLPPIAEAAATSGLHVQLDLNLDVAGNTA
                     SLINRHPDWYRAVGRRPADPREPPVPPGLHVVTFEAAAAIEAFVEYWAEQLRRLSDRG
                     IGGFRCKPNSLVPSTVWQQLIAALPGLEFAFWAPGVPAAALRTLPRDSFNTAYNSLAW
                     WDFGAGWLRDEMACLQTVAPVANTVGLPERPSSGATARQAAQRLLDVAASNGHGVLVP
                     MGFEFGLATDLTHPRYGADDWQHLNDHSLLDLAPVIQEANRRLAARSACAAGPTILSA
                     EDAPVAVMLEQPAQITLANRYLRRAATFDLTGVLPMLDGKLSGFTDATGSVLNDRVIL
                     LAPGEVQVFSGAPARPILTARPREASPKDDQATGRLAMATAAPRVAIEAIEPAVDGGR
                     FAVKRVVGERVTVSADIFADGHGKIGAVLQWRAGDEIAWHETVMRPEGNDRWSGRFLL
                     ERVGPYWFRVLSWPDRYATWRDELSKKHAAGLDVTLELEEGKRLIEAMAAQALGGLGA
                     IRSALRRRRADRMALLLDDNTAAEIARADTRPDAETSAEMPIVADRRAAEFASWYELF
                     PRNQSGDPARHGTFADVMRRLPAIRDMGFDVLYFPPIHPIGRTNRKGRDNATQAADGD
                     PGSPYAIGAEAGGHDAIHPALGTLEDFHALRDAAAAHGLELALDFAIQCSPDHPWLRE
                     HPEWFDWRPDGGLRYAENPPKKYEDIVNVDFHNAGAIPGLWLALRDVVGFWVKQGVRI
                     FRV"
     gene            3036..3112
                     /locus_tag="VHX39_04110"
     tRNA            3036..3112
                     /locus_tag="VHX39_04110"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3070..3072,aa:Arg,seq:tct)
     gene            complement(3365..3610)
                     /locus_tag="VHX39_04115"
     CDS             complement(3365..3610)
                     /locus_tag="VHX39_04115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990338.1"
                     /translation="MLFNSKCQFDRTILEKIKQGIPRPLRMRKQIDCFSQHRLANRQW
                     RFKFLDPIGGPEMISLRKIESGDEGPGISDASRSASL"
     gene            3685..4470
                     /locus_tag="VHX39_04120"
     CDS             3685..4470
                     /locus_tag="VHX39_04120"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX3990339.1"
                     /translation="MSTLFDLTGKIAIVTGSTKGIGLAIAKRMAEHGATVVVSSRKPD
                     ACEAVAQGIRDAGGKAIVVPCHVARKEELQNLVDKTVAQCGGIDIVVANAAVNPYLGP
                     QSGASDDVYERVMGTNIRSNFWLSNMVCPHLAARGGGSFIIISSIGGLIGSATLGLYG
                     ISKAADIALVRNLAVEWGPQNVRANAIAPGLVRTDFARALWEDPVRYKKTTRDAPLGR
                     IGEPDEIAGAAIYLASGAGSFTSGQTLVIDGGRMAGAPLHKDD"
     gene            4518..5630
                     /locus_tag="VHX39_04125"
     CDS             4518..5630
                     /locus_tag="VHX39_04125"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX3990340.1"
                     /translation="MTDAPLFDPRDFAIAPGITHVCAGGETACLRRHDAALSRYLHDK
                     SSGMAGRVAQEAEVARARAGIARLWGTDVGSIGLVSNVAEGIGIVAESLDWREGDNIV
                     IDANEYPSVAGPFLLHRHPTVTIRQARGDEPDRFAVCINDRTRVIGVSCVSYLTGERH
                     DLHALRTLADKVGALLIVDFTQASGYLPIDAAVADFAFSACYKWMLGITGIAVAYWNR
                     ARQPNWSPATAGWHSFAPGSRGYDEPPPLRADALRFTRGNPAHGPVYVLAQALDYLAA
                     FDMHDVQAHVQGLTTAMLDQLRALQLPTLTPTDPARHGASVCVPSLRAQAIVDGMAQN
                     GVLAWNGQGRVRFSFHGYNSTPDVDRAIDALRAEWH"
     gene            complement(5631..6581)
                     /locus_tag="VHX39_04130"
     CDS             complement(5631..6581)
                     /locus_tag="VHX39_04130"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3990341.1"
                     /translation="MKAGFIGLGTMGASMAANLQKGIQKDGHTVIVHDVRKDAAAPHI
                     KNGATWAETPAALAAECEVVFTSLPGPVEFDAVSFGANGLLSTIRKDTAYFDLTTNSP
                     TTVRKAAEEYTKKGAWLFDAPVSGGPRGAASGKLAIWCGGDQDVFEKWFPVLSTIGDQ
                     ARYIGPIGAGSVAKLVHNCYGYIATAAAAEVFSMGVKAGIEPLAIWEAVRQGAIGRRG
                     AFDSLTDQFLPNKYEPPAFALRLAHKDVSLATALGRELNVPMRLANLALADLSEGLNR
                     GWGNRDSRAIMVLQTERAGIEIKVDPQRLTEALDNKTKNG"
     gene            complement(6712..7080)
                     /locus_tag="VHX39_04135"
     CDS             complement(6712..7080)
                     /locus_tag="VHX39_04135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX3990342.1"
                     /translation="MALSFNPNGNPMEETMANPPSASRDAVRATVPYMIELTEKVLFG
                     DVWERPNLSKRDRSLIVCATLIATYRPEQLVGHLQRALDNGVTKAEISEMITHLAFYS
                     GWPASMSAANIARQVFEKNP"
     gene            7142..7888
                     /locus_tag="VHX39_04140"
     CDS             7142..7888
                     /locus_tag="VHX39_04140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3990343.1"
                     /translation="MTDERKVALVTGSALNIGRAIALALAADGFRIMTTARQSEADAR
                     ETARLVRDSGSDADTIMADISDHHQASGLVAATVQRFGRLDVLVNNASIRRQTKFADM
                     TPEEWREIMGTTIDGAFYCAHAAVPQIIAAGGGTIINLGGISSHVGAVGRVHAITAKA
                     GMIGLTRALAKELAADNITVNTVVPGSIETVRGFAAGGNHGRAALPDSPLGRRGTPEE
                     VAAMVRFLCSPEARYITGQAIHVNGGSFLS"
     gene            complement(7898..8344)
                     /gene="hemJ"
                     /locus_tag="VHX39_04145"
     CDS             complement(7898..8344)
                     /gene="hemJ"
                     /locus_tag="VHX39_04145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase HemJ"
                     /protein_id="HEX3990344.1"
                     /translation="MSILTALYPWTKALHIISMVAWMAGMFYLPRLFVYHCETIPGST
                     DSERFKVMEYRLLKQIINPAMIATWTFGILLVLTPGVISWHAGWWYVKLGCVLLMSGL
                     HGAMSKWRREFMEDRNTRSQKFYRIANEIPTVLLVVIVIMVIVRPF"
     gene            complement(8332..9048)
                     /locus_tag="VHX39_04150"
     CDS             complement(8332..9048)
                     /locus_tag="VHX39_04150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEX3990345.1"
                     /translation="MSEAAAAFLRARQRPLELVIFDCDGVLIDSEALCNRVVAEILTE
                     AGWPMTAEESNDRFIGSSFYAMQPVIEAQLGRSLGDDWVDRVVDVVTAAMAREAEPVA
                     GAREALDAVTAMRLQWRIASNSSHQEMAAKFGRAGWLELVDGRVHSSVDVIALGGAGK
                     PAPDLFLAAAAAAAVVPAHCLVIEDSVHGATAARAAGMDCLGFLPHGDAAALRAAGAV
                     PFHSMHDLPALLRAALACPF"
     gene            complement(9045..9839)
                     /locus_tag="VHX39_04155"
     CDS             complement(9045..9839)
                     /locus_tag="VHX39_04155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acyl homoserine lactonase family protein"
                     /protein_id="HEX3990346.1"
                     /translation="MTPWEVYAIRYARNDNAKRSTNFIGGDPHDAPMPLDYFVWAIRH
                     GSRTVILDTGFDEPMGKKRNRQFLRSPAVGLKAIGVEPDQVEDVILSHLHYDHCGNYD
                     MFPRAKYHVQEIEMAYCTGPCMCHDGLRGPFEEDDVVAMVRKVFARRVVFHDGNGQVA
                     EGITVHHVGGHSKGLQFARVFTQRGWMVLASDASHFYANFETGRAYPILHSHEATLRG
                     YETMKRMASAPNAIIPGHDPLVTARYPAAASGLEGIALRLDVEPSA"
     gene            complement(9836..11074)
                     /locus_tag="VHX39_04160"
     CDS             complement(9836..11074)
                     /locus_tag="VHX39_04160"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990347.1"
                     /translation="MALIKPISRRGALSLAGAAALAGKARADNPSEVKIAMEVPLSGP
                     WARSGLLEQMGARMAIEDVNAAGGVKALGGAKMKLMEYDAGDTAEKAKDAAQRMIAQE
                     PDLSGGFGAWLSTFTLAITEVTERAELPWLTLSYSDLITNRGFKYVFQSSPTADAQAE
                     QTVPIVMELATKATGKRPTKVAIVGDNTAATVSFLKPIRDHVLKNEKLDLVADEIYTP
                     PLADATTIVQKLRSGKPDFVLLQSTNVGDDKLLVEKFAEFGLTAKKMPLIGGGGHWCS
                     PELVKLTGPENLEGIIIALADWPGKKAADVAKRFIARTGEPWFGHDSIFAYAHVMILH
                     AAIEQAGSTDRHKVAAALHSMDLTNGPADLFPDGHVSYDEKGRRKGAGICIVQYRNGV
                     PMPVFPDAIATGEAFWPKTS"
     gene            complement(11095..11808)
                     /locus_tag="VHX39_04165"
     CDS             complement(11095..11808)
                     /locus_tag="VHX39_04165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014626647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3990348.1"
                     /translation="MLEVANLSVSYGGLRALTDVSLSVSEGQFVTVVGPNGAGKSTLF
                     KTISGVVRPTGGTIMFQGQNLLAMSAAERAHRGIAHVPEGRQVFKTLSVLENLEMGAY
                     PKAGRVHWNRTLERIHSLFPILAERSRQMAGTLSGGEQQMVAIGRGLASAPKLLMLDE
                     PSMGLAPAVTDTIFERISQIHADGVTILLVEQRVAEALELSDQGYVLETGHVVLQGPY
                     EILLADDRVRKSYLGLTEE"
     gene            complement(11801..>12521)
                     /locus_tag="VHX39_04170"
     CDS             complement(11801..>12521)
                     /locus_tag="VHX39_04170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3990349.1"
                     /translation="VENLSKSFGGLRAVSNVSFTVNAGEILGIIGPNGAGKTTLFNLL
                     NGVLPADEGTATLGGVSMLGKKVHQVCHMGVGRTFQVVRSFPRLPLIDNVIVGAYGAG
                     LSDQAAADEAIRALHRTGLAAQAGVPAGQLSNKQLRLMELARALAGRPRLLLLDETLA
                     GLGREECDDVLNVLHRLRQEGMTIGIIEHTMHAMLRIADRFVVLDHGAVLACGKPRDV
                     VEDRTVIEAYLGKKWLAKQDA"
BASE COUNT         2373 a         3871 c         3849 g         2428 t
ORIGIN      
        1 gacgcggaaa atccgcacgc cttgtttcac ccaaaacccg acaacgtcgc gcagtgccag
       61 ccacagccca ggaatggccc ctgcgttgtg aaagtcgaca ttgacaatgt cctcgtattt
      121 tttcggcggg ttttctgcgt agcgaagccc gccgtcgggc cgccaatcga accactccgg
      181 gtgctcgcgc agccacggat ggtcgggact gcattggatg gcgaagtcca gcgccagttc
      241 cagcccatgc gctgccgcgg cgtctcgcaa ggcgtggaaa tcctccaaag tgccgagagc
      301 gggatggatt gcgtcgtgcc cgccggcttc cgctccgatc gcgtaaggac tgccggggtc
      361 gccgtcggcc gcctgtgtgg cgttatcgcg acctttccga ttggtgcggc cgatcgggtg
      421 gatcggcggg aaatacaaca cgtcgaagcc catatcgcga attgcgggca atcgtcgcat
      481 gacgtcggca aacgtgccat ggcgcgccgg atcgccgctc tggttgcggg gaaacagttc
      541 ataccaagag gcaaattcag cggcgcggcg gtcagccacg atcggcatct cggcgctggt
      601 ctctgcgtcc ggccttgtgt ccgcccgcgc aatctccgcc gcagtattgt cgtcgagcaa
      661 caacgccatg cggtctgccc gacgacgcct caaggcggac cgaatggctc caagcccgcc
      721 taacgcctgc gcagccatgg cttcgatcag gcgtttgcct tcctcgagtt ccaatgtcac
      781 gtcgaggccg gctgcatgct tcttgctcag ttcgtctcgc caggtcgcgt accgatccgg
      841 ccaggacagg acgcgaaacc aatacggacc gacgcgttcc agcaggaatc gcccagacca
      901 gcgatcgtta ccctcgggtc gcatgaccgt ttcatgccag gcgatctcgt ccccggcgcg
      961 ccattgcaac acggctccga ttttcccatg cccgtcggcg aagatgtcgg cggaaacggt
     1021 cacccgctcg ccgaccaccc gcttcaccgc aaaacggccg ccatcgacag cgggctcgat
     1081 cgcctcgatg gcaacacggg gggcggcggt cgccatggca aggcgtcccg tggcctggtc
     1141 gtccttcggg ctcgcttcac gcggccttgc ggtcaggata gggcgagccg gcgctccgga
     1201 gaatacctgc acctcgcctg gcgccagcag gatcacccgg tcgttgagaa cactgccggt
     1261 tgcgtcggtg aagccggaca gtttgccgtc gagcatcggt agaacgccgg ttaggtcgaa
     1321 cgtggcggca cggcggagat accggttcgc cagtgtaatc tgggcgggct gttccagcat
     1381 gaccgccacc ggggcatcct cggcgcttaa aatcgtgggg ccggcggcac acgcgctgcg
     1441 ggcggcgagg cgccggtttg cttcctgaat gaccggcgcg agatcgagca ggctgtgatc
     1501 gttcagatgt tgccagtcgt ccgcgccata gcgggggtgc gtgaggtccg tagccaggcc
     1561 aaattcgaaa cccatcggta ccagaacgcc atggccgttc gaggcggcga cgtcgagcag
     1621 ccgctgcgcc gcctggcgcg ctgtcgcacc ggagctcggt cgctcgggca ggccaaccgt
     1681 attggcgact ggcgccacgg tctgcaggca cgccatttcg tcacgcagcc agccggcacc
     1741 gaaatcccac caggcgaggc tgttgtacgc cgtattgaaa ctgtcgcgcg gcaaggtccg
     1801 gagcgcggcc gccggtaccc cgggcgccca gaaggcgaac tccagcccag ggagtgcggc
     1861 gatcaactgc tgccagacag tggacgggac gagggagttt ggcttgcagc ggaagccgcc
     1921 gatcccgcgg tcgctgaggc gccggagctg ctcggcccag tactcgacga aggcctcgat
     1981 cgcggcggcc gcctcgaacg tgacgacgtg taggcctggt ggcactggcg gctcgcgggg
     2041 atccgccgga cggcggccga ccgcccggta ccaatccggg tgacggttga tcagggacgc
     2101 cgtgttccct gcgacatcaa ggttcagatc gagctgcacg tgtaggccgg atgtggccgc
     2161 agcctcggca atcggcggca gtgtcgcgat gtcggcggtg cccagatgac gaggaaggga
     2221 aagcagcacg gtatcaaatc ccagctcatt gatccggtcg atcaaagccg gctctggagg
     2281 acgtaatgag cgggtcaaat ccagtgcata gacccggcgg actcgatttg ccggcgattg
     2341 ctctgtgtgc cgtgtgtggg acactgttga acgcgacgac tctaacgtgg cttgccccat
     2401 tttaacgaaa ccgcaatcgg ggtgatttgt tgcattgcaa tcctgttaat cgatcgtgtc
     2461 gttcgcccgg cattgggcta tgcgttgcga actcacagaa agcgttggga ttgttcgaca
     2521 aaatcaagat ccttgtgtcc gaatgcaacg gtgggagttg gcccgcgaag gcttggtcga
     2581 agataattat cacgagtagg tggaaccgtg aggtgacagg ctgcgccgtg ccccaacttg
     2641 actctgtgca gggacagggt ccttcgttga atagcgcgcg gctggccgca agagcaaata
     2701 ccggcaggac tccagcaacg ctttctgtcg tcgggccggt cccatgcgcc tccgttgccg
     2761 taatagctgc cagctttttg cgggagcccg gctttttctc acggctggcg ctgcttcccc
     2821 cgtaggatgg cccgtgcctg agatatgtga ccggccatcg cgctcaatgc ggtgcggccg
     2881 ggcgtacgtt acccacaggt caaagccgga ccggcgtgca gcgatggagg ttgacatccc
     2941 aatcggtgtg gactgtagaa atacccgcct ggagtgggtc gatttcccca ccacaggctc
     3001 aaccatgcga ggtgggcaat cctgtaacct gttgcgcgcc cttagctcag gtggatagag
     3061 caacagcctt ctaagctgtg ggtcgcaggt tcgagtcctg cagggcgcgc caggttggca
     3121 atgagtcaag tacctattga cggcgacacg atgaaaacta ccgccgaact gccagacttt
     3181 accgccaggc aaagtccgag cggctctgtg tggtcgtatg ctcaaggatc cggtcgagga
     3241 acgactccgg cacgtaccca aagttccggc cagcaccacg cggcgcctcc ttccggagtt
     3301 ggtgaaatgc gcccgtggga tattttagtc cgatgtgccc gacctggctt cgaatcggag
     3361 caactcaaag actcgcggaa cgcgaggcat cgctgatacc gggtccctcg tcaccgcttt
     3421 cgatcttgcg caacgatatc atctccggac cgccgatcgg gtcaaggaac ttgaagcgcc
     3481 attgcctgtt tgcgagccgg tgctgactga agcaatcgat ttgcttgcgc attctcagcg
     3541 ggcgcgggat gccctgttta atcttctcca aaatggtgcg atcgaattgg catttcgagt
     3601 tgaagagcac atcgggcctt cacctgattg acgatcccgg tacgttgcgc atactcatgg
     3661 caaacgccag gaaagaggca tcacatgtca acgctgtttg acctcaccgg taagatcgcc
     3721 attgttactg gttcgaccaa agggatcggg ctggccatcg cgaaacgcat ggccgagcat
     3781 ggcgcaaccg tcgtcgtgtc aagccgcaaa ccggacgcct gtgaggcggt ggcgcaaggt
     3841 attcgcgacg ccggcggcaa agccattgtt gttccctgcc atgtcgcgcg gaaggaggaa
     3901 ttgcagaacc tcgtcgacaa aaccgtggca caatgtggcg gcatcgacat cgttgtcgcc
     3961 aatgccgccg tcaatccata tctgggtccg caatccggcg catcggacga tgtgtatgag
     4021 cgggtgatgg gcaccaacat tcgttcgaat ttctggctgt ccaacatggt gtgcccccat
     4081 ctggcggcgc gcggcggagg ttcgttcatt attatttcgt cgatcggcgg gctgattggc
     4141 agcgccacac tgggtcttta cgggatttcc aaggccgccg atatcgcgct ggtgcgcaat
     4201 ctcgcggtcg agtggggacc gcagaacgtg cgtgccaatg cgattgcacc aggcctcgtt
     4261 cgcaccgact tcgcccgtgc gctgtgggaa gatccggtac gctacaagaa aaccacgcgc
     4321 gatgccccgc ttggcaggat tggtgaaccc gatgagattg cgggtgcagc catttatctt
     4381 gcctcgggtg caggcagttt cacatccggt cagaccttgg tgatcgatgg tggacgaatg
     4441 gcaggggcgc cgttgcacaa agatgactga tctgtgggat cagtggtgcg ccgctttcca
     4501 ggcaaaggga ccgtgacatg accgacgcac ccttgttcga tcccagagac tttgccattg
     4561 cacctggcat cactcatgtc tgcgccggcg gcgaaaccgc ctgtctacgc cgccacgacg
     4621 ccgcattgtc gcgctattta catgacaaaa gcagcggcat ggcgggtcgc gtcgcacagg
     4681 aggcggaggt tgctcgcgcc cgcgccggga tcgcgcggtt gtggggaacc gacgtcggat
     4741 cgatcgggtt ggtcagcaat gtcgctgaag gaatcggtat cgttgcagaa agcctggact
     4801 ggcgggaggg cgacaacatt gtcatcgatg ccaacgagta cccctccgtg gccggaccgt
     4861 ttttgctgca ccggcatcca acggtaacga ttcgccaggc cagaggcgac gaaccggatc
     4921 gttttgcggt ctgcatcaat gaccgcacac gggtgattgg cgtcagctgc gtgtcgtatt
     4981 tgaccggcga gcggcatgat ttgcacgcac ttcgcacgtt ggcggacaaa gtcggtgcgc
     5041 tactgatcgt cgacttcacc caggcgtcgg ggtatttgcc aatcgacgct gcggtcgcgg
     5101 attttgcttt ctccgcctgc tacaaatgga tgcttggcat aaccggcatt gccgtcgctt
     5161 attggaaccg cgcccgccaa ccgaattggt cccccgccac ggccggttgg cactcgttcg
     5221 ctccgggttc acgcggctac gacgagccgc ctccgttgcg cgcggatgcc ttgcgtttca
     5281 ctcgaggcaa cccggcgcat gggccagtct acgtgctggc gcaggcgttg gattatctgg
     5341 ccgcgttcga catgcatgac gtgcaggctc atgtgcaggg gctgaccacc gcaatgttgg
     5401 atcagttgcg ggcactacag cttcctacat tgacgcctac cgatccggcg cgccacggcg
     5461 ctagcgtttg cgtgccgtcc ttacgtgctc aggcaatcgt cgacggcatg gcacagaacg
     5521 gcgtgctggc gtggaacggg caggggcgcg tgcggttcag ctttcatggc tacaattcga
     5581 caccggacgt cgaccgtgcg atcgacgccc tgcgtgccga atggcactga tcagccgttc
     5641 tttgttttgt tatccaacgc ctcggtcaac cgttgcggat cgaccttgat ctcgataccg
     5701 gcacgttcgg tttgcagcac catgattgcg cgcgagtcgc gattgcccca gccgcggttc
     5761 aggccctcgg acaggtctgc cagtgccaaa ttggccagtc gcatcggcac gttcagttcg
     5821 cggccaagcg cggtcgcaag cgaaacgtcc ttatgcgcga ggcgcaaggc aaacgccggc
     5881 ggctcgtact tattaggcag gaactgatcg gtcagagaat cgaacgcgcc gcggcggccg
     5941 atcgcgccct gccgtaccgc ttcccagatc gccaaaggtt caatgccggc ttttacgccc
     6001 atactgaaca cctcggcggc ggcagcagtg gcgatgtagc cgtaacaatt atgcaccagt
     6061 ttcgccactg acccggcgcc gatcggaccg atataccgcg cctgatcgcc gatcgtcgac
     6121 aacaccggaa accatttctc aaacacatcc tgatcgccgc cgcaccagat cgcgagcttg
     6181 ccggacgccg cccctcgagg tccgccgctg accggcgcat cgaacagcca ggcacccttt
     6241 ttcgtgtact cttccgcggc cttgcgcacc gtggtcggcg agttcgtcgt caggtcaaaa
     6301 taggccgtat ccttgcgaat cgtggacaac agcccgttgg cgccgaacga cacggcgtcg
     6361 aattccaccg gaccgggcag cgaggtgaaa accacctcgc attcagccgc cagcgcagcg
     6421 ggggtttcag cccaggtggc gccgttcttg atgtgcggcg cagcggcgtc tttgcggacg
     6481 tcgtgtacaa tgaccgtgtg gccatctttt tggatgccct tttgcaagtt ggcggccatg
     6541 ctggcgccca tggtaccaag gccgatgaaa cccgccttca tttgctacgc tcccttcgta
     6601 ctggtcggtc gtatcgacca gatgtcacaa gtcgttctgt gtatataacc aaattacctg
     6661 cccgccgggc agcccaaatg gcctgcgcca cggcgaggca ggttggccgt gtcacgggtt
     6721 cttttcaaag acctggcgcg cgatattcgc cgcggacatc gaagccggcc agcccgaata
     6781 gaacgccaga tgcgtgatca tttcggaaat ctcggccttg gttacgccgt tatccagcgc
     6841 gcgctgcaag tggccgacca gttgttccgg gcggtaggtt gcgatcaatg tggcgcacac
     6901 gatcaggcta cggtcgcgtt tggacaggtt cgggcgttcc cacacgtcgc cgaacagaac
     6961 tttctccgtg agttcgatca tgtacggcac ggtggcgcgg acggcatcac gggacgcgga
     7021 tggcgggttg gccatggttt cctccattgg attgccattg ggattgaatg acagcgccat
     7081 tgcacaccaa cccgctttcg ctgtccaatc gccgcctgtc acaaacgcgg aggcacggac
     7141 aatgaccgac gaacgcaagg tggcgctggt aaccggcagc gcactgaaca ttgggcgcgc
     7201 gatcgcgctg gcgctggcag cggacgggtt ccgaatcatg accaccgctc gtcagtcgga
     7261 agccgacgcg cgcgagaccg cccgtctggt acgtgactct gggtcggacg ccgacacaat
     7321 catggccgac atatccgatc accatcaggc gagcggactg gtcgctgcca cggtgcaacg
     7381 atttggtcgg ctggacgtgt tggtcaacaa cgcttcaatc cggcgtcaga ccaaattcgc
     7441 cgatatgacg cccgaggaat ggcgcgagat catgggcacc acgatcgacg gcgcgtttta
     7501 ttgtgcccat gccgcggtgc cacagatcat cgctgcaggc ggcggcacga tcataaatct
     7561 tggcggcatt tcctcgcatg ttggagcggt cggccgggtc cacgcgatca ccgcgaaggc
     7621 cggcatgatc gggctgacca gggctctggc gaaggaactt gcagcagaca acatcactgt
     7681 gaacaccgtc gtgccgggct cgattgaaac cgtgcggggt tttgctgcgg gcggcaacca
     7741 tggacgcgcg gcattgcccg acagcccgct tggccgtcgc ggtacgcccg aggaagtcgc
     7801 tgcaatggtc cgttttctct gctcccctga agcgcgctac atcaccgggc aggcaatcca
     7861 cgtgaacggc ggctcgtttc tgagttagac ggacacgtta aaacgggcgc acgatcacca
     7921 tgatcacgat tacgaccagc agcaccgtgg gaatctcatt ggcgatccga tagaactttt
     7981 gcgagcgtgt gttgcgatct tccatgaact cacggcgcca tttcgacatg gcgccgtgca
     8041 gccccgacat cagcagcacg caacccaatt ttacatacca ccagccggca tgccaactga
     8101 tcacgcccgg agtcagcacc aacagaatgc caaaggtcca ggtggcgatc atcgccggat
     8161 tgatgatttg cttcaatagc cggtactcca tcaccttgaa gcgttcgctg tcggttgatc
     8221 ctggtatggt ttcgcaatga tatacaaaca gccgcggcag ataaaacatg cctgccatcc
     8281 aggcgaccat cgagatgatg tgcagcgctt tggtccaagg atacaacgcc gtcagaatgg
     8341 acatgccaaa gccgctcgca gaagcgccgg gagatcgtgc atggaatgaa acgggactgc
     8401 tcccgctgcg cgcagtgcgg ctgcatcgcc atgcggaaga aatcccagac aatccatgcc
     8461 agcggcgcgc gctgcagttg cgccgtggac gctgtcttcg atcaccagac aatgtgccgg
     8521 tacgactgct gccgccgcgg cggcagcgag gaacaggtca ggcgccggtt tcccggcacc
     8581 gccaagcgcg atcacgtcga ctgagctgtg cacacggccg tcaaccagtt ccagccatcc
     8641 tgcacggccg aatttcgccg ccatttcctg atgcgacgaa ttggacgcga tgcgccactg
     8701 cagtcgcatt gccgtgaccg cgtccagtgc ctcgcgtgca cccgcgaccg gctcggcttc
     8761 acgagccatc gctgcggtca ccacgtccac gacacgatca acccagtcgt cgccaagcga
     8821 acggcccagt tgcgcctcaa tcacaggctg catcgcgtaa aaactactgc cgatgaaacg
     8881 gtcgttgctt tcctcggcgg tcatgggcca gcccgcttcg gtcaggatct cggcgaccac
     8941 gcgattacac agagcctcgc tgtcgatcag gacgccgtcg caatcgaaaa tcaccagctc
     9001 gagcggccgc tgccgcgccc gaaggaacgc agcggcggcc tcactcatgc gctgggttct
     9061 acgtcgagcc ggagtgcgat gccttccagg cctgacgccg cggccgggta acgtgcggtg
     9121 accagcggat cgtgacccgg aatgatcgcg ttcggcgcac tggccatccg cttcatggtt
     9181 tcgtagccgc gcaacgtggc ttcgtggctg tgcaggatcg gataggcgcg gccggtttca
     9241 aagttggcgt aaaagtggct ggcatcggag gccagcacca tccagccgcg ctgcgtgaac
     9301 acccgggcaa actgcaggcc cttgctgtgg ccgccaacgt gatggaccgt gatgccttcg
     9361 gcaacctggc cgttaccatc atgaaacaca acgcggcggg caaacacctt tcggaccatg
     9421 gcgacgacgt cgtcttcttc gaacgggcca cgcagcccgt cgtggcacat gcaaggcccg
     9481 gtgcaatacg ccatctcgat ttcctgcacg tgatacttcg cgcgcgggaa catgtcgtaa
     9541 ttgccgcaat gatcgtagtg caaatgcgac aggatcacat cttccacctg atccggctcc
     9601 acgccgatgg ccttcagacc aacggcgggg gagcgcagga actggcgatt gcgtttcttg
     9661 cccatcggtt catcgaagcc ggtgtccaga atgaccgttc tggacccgtg cctgatcgcc
     9721 catacgaaat agtccaacgg catcggtgca tcgtgcgggt cgccaccgat gaagttggtc
     9781 gaccgtttcg cgttgtcgtt acgcgcgtaa cggatcgcgt aaacttccca cggagtcacg
     9841 acgttttcgg ccaaaaggcc tcaccggtgg cgatcgcatc cggaaacacc ggcatcggaa
     9901 caccgttgcg gtactgcacg atgcaaatcc ctgccccctt ccgccggcct ttttcgtcgt
     9961 agctgacgtg cccatccggg aacaggtcgg cgggcccatt cgtcaagtcc atactgtgca
    10021 gtgccgctgc gaccttgtgc cgatcggtcg aaccggcctg ctcgatcgcc gcatgcagga
    10081 tcatcacgtg ggcgtaagcg aagatcgagt catggccgaa ccaaggctcg ccggtgcgcg
    10141 caatgaagcg tttcgctaca tccgccgctt tcttcccggg ccagtcggca agagcaatga
    10201 taatgccttc caggttctcg ggtccggtca gtttgaccaa ctcgggagag caccagtgtc
    10261 cgccaccgcc gatcaacggc atcttcttgg cagtcagccc gaattcggca aacttctcga
    10321 ccagcagctt gtcgtcgcca acgttggtcg actgcaacaa gacgaaatcc ggtttgccag
    10381 accgcaactt ttgcacgatc gtcgtcgcat cagccagcgg tggcgtatag atctcgtcgg
    10441 cgacaagatc cagcttttcg ttcttcaaaa cgtgatcgcg gatcggctta aggaagctga
    10501 cggttgccgc agtgttgtcg ccgacgatcg cgactttggt ggggcgctta ccagtggcct
    10561 tggtcgcgag ttccatgacg atcgggacgg tttgctcggc ctgcgcatcc gctgtcggcg
    10621 aggactgaaa cacgtattta aagccgcggt tggtgatcag gtcggaatag gacagcgtca
    10681 gccagggcag ttcggcacgc tcggtgacct cggtgatggc gagggtaaaa gtggacagcc
    10741 aggcgccgaa accgccggac aggtcgggct cctgcgcgat catgcgttgc gcggcgtcct
    10801 tggctttttc tgccgtgtcg cctgcgtcat actccatcaa cttcattttc gcgccgccca
    10861 atgctttgac gccgccggca gcattgacat cctcgatggc catgcgggca cccatttgtt
    10921 ccagcaggcc gctacgcgcc cagggaccgg agagcggcac ctccatggcg attttgacct
    10981 cggacgggtt gtccgcgcgg gctttgccgg ccagcgcagc agcacccgcg aggctcaatg
    11041 cgccgcgccg gcttatgggt ttgatcaatg ccatcttgtc ggtctccttt gcagtcattc
    11101 ttcggtcagg ccgaggtagg atttgcgcac ccggtcgtcg gccagcaaga tctcgtacgg
    11161 accttgcaaa accacatgcc cggtttctaa aacgtaaccc tgatcggaca gttcgagcgc
    11221 ctcggcgacg cgttgttcga ccagcaggat ggtaacgccg tccgcgtgga tctgcgagat
    11281 gcgctcgaag atcgtatcgg tgacggcggg cgccagtccc atcgacggtt cgtccagcat
    11341 cagcagtttc ggtgcgctgg cgagtccgcg gccgatggca accatctgtt gctcgccgcc
    11401 cgacaaggtt ccagccattt gccgggagcg ttccgccagg atcggaaaca atgagtggat
    11461 gcgttcgagc gtgcggttcc agtgcacgcg tccggctttc ggataggcgc ccatttccag
    11521 attttccagc accgacaggg tcttgaacac ctgtctgccc tcggggacat gggcgatgcc
    11581 gcgatgcgca cgctctgctg ccgacatggc caacaggttc tgaccctgga acatgattgt
    11641 tccgccggtg ggtcgaacga cacccgaaat ggtcttgaac agggtcgact taccggcacc
    11701 attagggccg accaccgtga cgaattggcc ctcggacacc gacagcgaga catcggtcag
    11761 ggcgcgcaag ccgccgtaag agacggacag gttggcaacc tcaagcatcc tgtttggcca
    11821 gccacttttt gcccaaatag gcctcgatca ccgtccggtc ctcgaccaca tccctgggct
    11881 tgccgcaggc gagcactgcg ccgtgatcca gcacgacgaa gcggtcggcg atccgtagca
    11941 tggcgtgcat cgtgtgctcg atgatgccaa ttgtcatgcc ttcctggcgt aggcgatgca
    12001 gcacgttcag cacgtcgtcg cattcctcgc ggcccaatcc ggcgagggtc tcgtcgagca
    12061 acagcaaacg aggccggccg gccagagcac gggccagttc cataaggcgc agttgcttgt
    12121 tcgacaattg tcccgcgggc acgccggcct gcgcggcgag gccggtacgg tgcaaggcgc
    12181 ggatcgcttc gtccgcggct gcctggtccg aaagacctgc gccgtaggct ccgacaatga
    12241 cattgtcgat caacggcaat cgaggaaaac tgcgcaccac ctggaaggtg cgtcctactc
    12301 ccatgtggca gacctggtgg acctttttgc ccagcatcga cacgccaccg agggtcgcgg
    12361 taccttcgtc ggctggcagc acgccattca gaagattgaa caaggtcgtc ttgccggcgc
    12421 cgttcggtcc gatgataccg aggatttcac ctgcattgac ggtaaagctg acattgctga
    12481 ccgcgcgcag gccgccaaag gatttggaca gattttcgac a
//
LOCUS       DATAVD010000223         2955 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_951849, whole genome shotgun sequence.
ACCESSION   DATAVD010000223 DATAVD010000000
VERSION     DATAVD010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2955
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_951849"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            235..1749
                     /locus_tag="VHX39_04175"
     CDS             235..1749
                     /locus_tag="VHX39_04175"
                     /inference="COORDINATES: protein motif:HMM:NF012664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator"
                     /protein_id="HEX3990350.1"
                     /translation="MTFAFRCLIVAGLVLGLLSTAHSQEAADTPPTHSETAKDNAREP
                     AKLPPEQTTHHVVELPGRTLKFTATAGAIRLSNDANEPQADVAYIAYQLEGADRTTRP
                     VTFAFNGGPGMASGWLQVGAIGPWRISIGGANGVPSAAPGPQPNADTWLDFTDLVFVD
                     PPGTGYSRILGKGDAARRRLWSVNGDIDALAETVRRWLDHAGRIVSPKYILGESYGGF
                     RGPRLVRALQSDHGVGVTGLVLISPLLDVHVMSGYNDPLSWEALLPSEVAAARALRGP
                     VTRADLADVEQYAETDYLADMMRGFHDAAAVARITERVAALTGIDRAVVARGGGRLDR
                     DVFLHELERAQGRVGSLYDATVTRTDPFPRDVLSDYPDPILEGLKAPVTSAMVAIYTD
                     QLNWRPDGVYQLSNDDASRQWNWGRGMGRPESLSRLQAALALDPRLHVLIAHGLFDLV
                     TPYFATVRELNQLPDAASAERVRLVVYPGGHMFYSEDASRAAFREAVSALFRGP"
     gene            1946..>2955
                     /locus_tag="VHX39_04180"
     CDS             1946..>2955
                     /locus_tag="VHX39_04180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990351.1"
                     /translation="MVRISTLTTIVASMGLLWSVLFVSPHAESAPVAAVQGSSGGPAE
                     SAPPAQPAFAVDCKKPTSDLPHGAEHGPISVTVNAATAWQPRGGEVLIAVAGDPADFS
                     GVSFKACFGWNDAGATDYFSADNLKRVDWYYGFVNVRPVDVSGTVNLGVIVPSLPWAP
                     TQFFTRWFGTGRSSGLGLVPVADLRLIAYTKDRVLFDEVRPVGITTVLLALIVAAGAL
                     VVAIIGLHRLTVGPKPPRPRQTRRQRVAAVRNAIFSPDWILTLIQTPDGRASLSAFQV
                     LLWTLVVAVSAMYVMTLSGNLINLTSGTLTLLGIAGAAGLIASYTDSPGTDSSGGPIS
                     GAG"
BASE COUNT          489 a          931 c          950 g          585 t
ORIGIN      
        1 cccggagagg ttaaaaaccg gtaaatatcg gcggcgattt tcctgttttg ttcgtgcgcg
       61 gcgttggcaa ttcgttaacc ctcgcgccac cggtccaggt tgccatcgcg agcaaagtga
      121 aacgatctgt gggcgctgac gccgggattg ccgcgccacg ttcacaacga cccgcacgct
      181 tgtaaaacgc cggcctgtag tggctcggca gcgggcaatt tgctacgcac cggcatgacc
      241 ttcgcattcc gctgcctgat cgtcgccggt ctcgttctcg gcttgctgtc cacagcccac
      301 agccaggagg ctgcggatac gccgccaact cattcggaga cggccaagga caacgccaga
      361 gaaccagcaa agctgccgcc cgagcagacc acccatcacg tcgtggaatt gcccggccgc
      421 acgctgaaat ttaccgccac cgccggggcc attcggctca gtaacgacgc gaacgaaccc
      481 caggccgacg tggcgtacat cgcttatcag ctggagggtg cggatcggac aacccggccg
      541 gtcacctttg ctttcaacgg cgggcccgga atggcgtcgg gctggttgca ggtcggcgcg
      601 atcggtccgt ggcggatctc gatcgggggc gccaacggcg ttccctccgc cgcccctggg
      661 ccgcagccga acgccgacac ctggctcgat ttcacggacc ttgtgttcgt cgacccgcct
      721 ggcaccggct attcccgcat tctgggcaag ggcgatgcgg cgcgccggcg gctctggtcg
      781 gtcaatggcg acatcgacgc attggccgag acggtgcgcc gttggttgga ccatgccggc
      841 cggatcgttt cgcccaaata cattctcggc gagagctatg gcgggttccg cggccctcgc
      901 ctggtgcggg cgttgcagtc cgatcacggc gtcggggtca ccgggctggt gctgatttcg
      961 ccactgctcg atgtacatgt catgagcggc tacaacgatc cgctttcgtg ggaagctctg
     1021 ctgccgtcgg aggtcgccgc cgcccgtgcg ttgcggggtc cggtgacgcg cgccgatctt
     1081 gcagatgtcg agcaatatgc cgagaccgac tacctggccg acatgatgcg cggatttcac
     1141 gacgccgccg cggtggcacg catcaccgag cgcgtcgctg cactgaccgg cattgaccgg
     1201 gcggtcgtgg cgcgcggcgg cgggcggctg gaccgcgacg tgttcctgca tgaactggag
     1261 cgcgcgcaag gccgcgtcgg cagcctgtac gacgcgacgg taaccagaac cgatccgttc
     1321 ccgcgagacg tgctcagcga ttatcccgat ccgatcctgg aaggcctgaa agcgccggtg
     1381 accagcgcaa tggtggcgat ttacacggat caattgaact ggcggccgga cggagtttat
     1441 cagctatcca acgacgatgc gtccaggcaa tggaactggg gccgcggcat gggccggccc
     1501 gagagtttga gtcgtttgca agccgcattg gcgctcgatc cgcggctgca cgtgctgatt
     1561 gcacacgggt tattcgacct ggtcacgccg tacttcgcca cggtgcgcga actgaaccaa
     1621 ttgccggacg ctgccagtgc cgaacgtgtt cggctggtgg tttatccggg cggccatatg
     1681 ttttattccg aggacgcctc ccgtgccgcg ttccgcgagg cggtcagcgc gttgtttcgg
     1741 ggaccgtgac ccggtcctcg gttcactgat tcgaaacgat ctgaaccgat tggacgatcg
     1801 tgcggtgcaa ttgtcacgca ttgctttcag gcgcataacg ggagggcgca aataccggcc
     1861 accggcgcgc atggcctgtg gcgatcgaac cggtccccgg caacgtttcg cccacagtgg
     1921 ccggccaggt cacggagagt atcgaatggt tcgtatatcc acccttacga cgatcgttgc
     1981 atcgatgggt ttgctttgga gcgtgctgtt tgtcagtccc cacgccgaaa gtgctcccgt
     2041 cgccgctgtc cagggctcat ccggcgggcc ggccgaaagc gcaccccctg cgcagcccgc
     2101 atttgcggta gattgcaaaa aaccgacgtc ggacctgccg cacggcgccg aacatggccc
     2161 gatcagcgtg accgtgaatg cggcgaccgc atggcagcct cgcggcggcg aggttctgat
     2221 cgccgtcgcg ggcgatccgg cagatttctc cggtgtgagt ttcaaggcgt gcttcggttg
     2281 gaatgacgca ggtgcaaccg attacttttc cgccgacaat ctgaagcgcg tcgattggta
     2341 ctacggtttc gtcaacgttc gcccagtgga tgtaagtgga accgtgaatt tgggcgtgat
     2401 tgttccgtcg ctgccctggg cgcccaccca attctttacg cgttggttcg ggaccggccg
     2461 ctccagcggc ctcggcctcg tgccggtcgc cgacctccga ctgattgcct atacaaagga
     2521 ccgcgtattg ttcgacgagg tccggccggt tggcatcacc accgttttgc tcgctctgat
     2581 cgtggccgcc ggcgcgctgg tggtcgcgat catcggtctt caccgcctca cggttggacc
     2641 gaagccgccg agaccgcggc agacgcgccg ccagcgcgtc gccgctgtgc gtaacgccat
     2701 cttttcgccg gactggattc tgaccctgat ccagacaccg gacggacgag cgagcctgtc
     2761 ggcctttcag gtgttgttgt ggacattggt cgtggcagtc agtgcaatgt acgtcatgac
     2821 gctgtccggc aatttgatca accttacgtc gggcacgctt acattgcttg gcattgccgg
     2881 ggccgcggga ttgattgcct cctatacgga ttcgccgggc actgattcgt caggcggacc
     2941 gatctccggg gcagg
//
LOCUS       DATAVD010000224         3151 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_579034, whole genome shotgun sequence.
ACCESSION   DATAVD010000224 DATAVD010000000
VERSION     DATAVD010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3151
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_579034"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..843
                     /locus_tag="VHX39_04185"
     CDS             <1..843
                     /locus_tag="VHX39_04185"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX3990352.1"
                     /translation="RPSLVVCSINGFGSTGPYKDRPAFDFIAQAMSGFMSVNGALDDP
                     PLRSGVPISDLIAGLYAALSIAAAVPHARSTGQGQRAEVSLTNGLVSLLAYIATNYFA
                     TGSVPPRSGNDHPIAAPYGLFPTRDGQIALAPADDAFFRRLADALGEPGLKDDPLYAT
                     QSVRVANRDRINAIVGGKLAGNTTAHWVEVLNKAGVPCGPVNSIAEVFQDPQILAQGM
                     VMDIEHPGYGIVRSLGFPIKFSDRPCQVRRPAPRLGEHSNEVLAELGYAAEDRDVLRR
                     DGVI"
     gene            complement(856..1839)
                     /locus_tag="VHX39_04190"
     CDS             complement(856..1839)
                     /locus_tag="VHX39_04190"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEX3990353.1"
                     /translation="MISAFACGNGRLDRLADTGSVDALQHAIWIDLRSAGPDEIDRVQ
                     RATGLTIPSEADLSEIESSSRMSSRDGTLYLSMPLVQMVDDGPRGVAAGFVLSPDRLI
                     TIRFSPSQIFDAYAEHLPRGSATAGCSAEIFVGLLEALVDRQADVLEKVRADLDIISH
                     AIFAMGVKQEGGRKGEDATLRRTLGQLGRIGDLISHVRDTQVGAARIVPYVETTAADW
                     LPKALLPRLTTLRQDIASVSDFDTHLNDKLQFLLDATLGFINIAQNNVMKVMAIASVV
                     GIPPVLIAGVYGMNFKNIPEYDWAWGYEWGWGLIILTTLIPLAVFRWRKWI"
     gene            complement(1984..3003)
                     /gene="ilvC"
                     /locus_tag="VHX39_04195"
     CDS             complement(1984..3003)
                     /gene="ilvC"
                     /locus_tag="VHX39_04195"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEX3990354.1"
                     /translation="MRVYYDRDSDVNLIKGKNVAIIGYGSQGHAHALNLKDSGVKQLA
                     IGLRAGSAGIAKAEGAGLKVMDPADAAKWADVVMVLTPDEGQGDLYRDKLGPNMKPGA
                     ALAFAHGLNVHFNLLDPRSDIDVFMIAPKGPGHTVRSEYQRGGGVPCLVAVSQNPSGN
                     ALEVALSYASAIGGGRAGVIETTFKEECETDLFGEQVVLCGGLVELIKGGYETLVEAG
                     YAPEMAYFECLHEVKLIVDLIYEGGIANMNYSISNTAEYGEYVSGPRIINAETKAEMK
                     RVLADIQSGRFARDWMLENKVNQSSFKATRRRLSEHPIEEVGAKLRAMMPWISKNALV
                     DKTKN"
     gene            complement(3030..>3151)
                     /locus_tag="VHX39_04200"
     CDS             complement(3030..>3151)
                     /locus_tag="VHX39_04200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010510064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEX3990355.1"
                     /translation="ELTGATDKIDAFIELMRDLGLAEVSRSGIAAIARGSRVI"
BASE COUNT          569 a          982 c          986 g          614 t
ORIGIN      
        1 cggccgtcac tggtggtatg ttcgatcaac gggttcggca gcaccggacc ttacaaggac
       61 cggccggcct tcgatttcat cgcccaggcg atgagtggct tcatgagcgt caacggcgcg
      121 ctcgacgatc cgccgttgcg ctccggtgtg ccgatcagcg acctgatcgc cgggctgtac
      181 gcggctttga gcatcgccgc cgctgtgccg cacgctcggt cgaccggcca agggcagcga
      241 gctgaagtca gcctgaccaa cggactggtc agcctgctgg cctatatcgc gacaaactac
      301 ttcgccaccg ggtcggtgcc gcctcgcagc ggcaacgacc atccgatcgc ggcgccgtac
      361 ggtctgtttc ccacccggga cggacagatt gcgctggcac cggcggatga tgcgtttttc
      421 cgacggctgg cggatgcgtt gggggagccg gggttgaagg atgatccgct ctacgcgacc
      481 caatcggttc gggtggcgaa ccgggatcgg atcaacgcga tcgtcggggg gaagctggcg
      541 gggaacacga cggcgcattg ggtggaggtg ctgaacaagg cgggtgttcc atgcgggccg
      601 gtcaacagca ttgcggaggt gttccaggac ccgcagatcc tggcgcaggg catggtcatg
      661 gacatcgagc atcccggcta cggaatcgtc cggtcgctgg ggtttccgat aaaattctcc
      721 gatcgtccgt gtcaggtgcg gcgtccggcc cccagactgg gcgaacattc gaatgaggtg
      781 ttggcggaac tcggttacgc ggcggaggac agggacgtgt tgcggcggga cggggtgatc
      841 tgacgctgcg ggtgttcaaa tccatttacg ccagcgaaac acggcaagcg ggatgagggt
      901 ggtcaggatg atcagccccc aaccccattc gtagccccag gcccagtcgt attcagggat
      961 attcttgaaa ttcatgccgt acacgccggc gatcagcacc ggcgggatgc cgacgaccga
     1021 ggcgatcgcc atcaccttca tgacgttgtt ctgggcgata ttgatgaagc ccaatgtcgc
     1081 gtcgagcagg aattgcagct tgtcgttcag gtgtgtatcg aagtcgctga ccgaagcgat
     1141 atcctgccgc aaggtcgtca acctgggcag cagcgctttg ggcagccagt ccgccgccgt
     1201 ggtctcgacg tagggtacaa tcctggccgc gccgacctgg gtgtcccgga catgtgaaat
     1261 caggtcgccg atccgcccaa gctgccccaa cgtccggcgc agcgtggcat cttctccctt
     1321 ccgcccaccc tcctgcttca cgcccatggc gaaaatcgca tgagaaatga tatcgaggtc
     1381 ggcccgcact ttctcgagca cgtccgcctg ccgatcgaca agcgcctcca gcaagccgac
     1441 aaatatctcc gcgctgcatc ccgccgtcgc agacccgcgg gggagatgtt cagcgtaagc
     1501 atcgaatatc tggctgggag aaaaccggat ggtgatcagc cggtcaggcg acagcacaaa
     1561 ccccgccgca acaccacgcg gaccgtcatc aaccatctgc accagcggca tgctgagata
     1621 aagtgtgcca tcgcggctgg acatacggct ggacgactcg atctcactga gatcggcttc
     1681 tgatgggatc gtcagtcccg tcgcccgttg cacccggtcg atttcatccg gtccggcgct
     1741 gcgcaggtcg atccagatcg cgtgttgcaa cgcatcgacg gacccggtgt cggccaggcg
     1801 atccagccgg ccattcccgc aggcaaatgc actgatcatc gcgaaccttt tccatcacag
     1861 atcggtttcg aacgccggga cggattcccg tgacgacgaa gccggtttcc agccgatgtt
     1921 agatggcagg gaatcgcttc gccgtcatgg tccttacgat gacaatcagc aattgttgaa
     1981 gcgtcagttc ttcgtcttgt ccaccagcgc gttcttgctg atccacggca tcatggcgcg
     2041 cagcttggcg cccacttcct cgatcggatg ctcgctcagc cgacggcgcg tcgccttgaa
     2101 gctggactgg ttcaccttat tctccagcat ccagtcgcgg gcgaaacggc cggactggat
     2161 atccgccagc acacgcttca tctcggcctt ggtttcggca ttgatgatgc ggggaccgga
     2221 gacatactcg ccatattcgg cggtgttgct gatcgagtag ttcatgttgg cgatgccgcc
     2281 ttcataaatc aggtcgacga tcagcttcac ttcgtgcagg cactcgaaat acgccatttc
     2341 aggcgcgtaa ccggcttcca ccagtgtttc gtagccgccc ttgatcagct ccaccagacc
     2401 gccgcacagc acgacctgct caccgaacag atcggtttcg cattcttcct tgaacgtcgt
     2461 ctcgatgacg ccggcgcggc cgccgccgat ggcgctggca taggacagcg ccacttccag
     2521 tgcgttgccg gacgggttct gcgagaccgc gacgaggcag gggacaccac cgccgcgctg
     2581 gtattcgctg cgcaccgtgt ggccggggcc tttcggcgcg atcatgaaca cgtcgatgtc
     2641 ggaacgcgga tcgagcaggt tgaagtggac gttcagcccg tgcgcgaagg caagggcggc
     2701 gccgggcttc atgttgggac ccagcttgtc gcggtacagg tcgccctggc cctcgtcggg
     2761 ggtcagcacc atcaccacat cggcccattt ggcggcatcg gccgggtcca tgaccttcag
     2821 gccggcgcct tccgccttgg cgatgccggc ggatccggcg cgcaggccga tggcaagctg
     2881 cttgacgccg ctgtccttca ggttcagcgc atgggcgtgg ccctggctgc catagccgat
     2941 gatggcgacg tttttcccct tgatcaggtt cacgtcggaa tcgcggtcgt agtaaacgcg
     3001 catggtactt cttcctctgt ccagtcgttt cagattacgc gggagccgcg ggcgatcgcg
     3061 gcgatgccac tgcgggagac ctcggccagg ccaaggtcgc gcatcagttc gataaaggcg
     3121 tcgatcttgt cagtcgcgcc agtcaactcg a
//
LOCUS       DATAVD010000225         5236 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_579059, whole genome shotgun sequence.
ACCESSION   DATAVD010000225 DATAVD010000000
VERSION     DATAVD010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5236
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_579059"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..778
                     /locus_tag="VHX39_04205"
     CDS             <1..778
                     /locus_tag="VHX39_04205"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX3990356.1"
                     /translation="GIGAADAVEEAINAHGADTIAAIIAEPVIGAGGVIVPSPTYFPR
                     LREICDRHNVLLIADEVITGFGRTGKWFALDHWGVQPDLMSFAKGVTSGYLPLGGIIV
                     SKRIHEAMENAPMDERYMHAATYSGHPACCAVGLANIDIIEREGLVERAQVEGDRFRA
                     GLMTLASLPNVGEVRGIGMLAAIELVEDKGSKQPALGLGGKVVGEFMKRGLLTRQRGG
                     ADGPPASGDTLVFAPPLMTPAATLDRIVQIVGDSIVAATA"
     gene            969..1811
                     /locus_tag="VHX39_04210"
     CDS             969..1811
                     /locus_tag="VHX39_04210"
                     /inference="COORDINATES: protein motif:HMM:NF024859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3990357.1"
                     /translation="MIFPVPTLDHVVINVRDRIDEGADTFRRLGFTLTPRGYHTLGSM
                     NHLAMFGTDYLELIAARPGDTKRPEIMEAPEGLNGLVLGTEDSAATYAAMQQAGVPML
                     PPGEFSRPVALPDGSSRDAVFRTVRLAPGTITAGRLYFCHHFTRDLVWRDEWRHHANG
                     ATGVVRAVIADTDPSKLGALFGRMFGSDAVRPIAGGLALTVGVSRFDIVTPEALQIEY
                     GELAPVAGGRESFMAALVFRTRSLDAAWGALESGGIGGVRRDNGQVIVPAASACGATL
                     AFCL"
     gene            1859..2236
                     /locus_tag="VHX39_04215"
     CDS             1859..2236
                     /locus_tag="VHX39_04215"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HEX3990358.1"
                     /translation="MPADSPLTTYIAHLERGELAYQFSPSAGGAVFYPRVIAPATGKA
                     DLEWRVSKGFGSVHATTVVHPQKGEPYNVALIDVDEGFRMMSRVEDIAPALVRIGMRV
                     KFRTHGAEGDEPPYPVFTPADAA"
     gene            2236..3381
                     /locus_tag="VHX39_04220"
     CDS             2236..3381
                     /locus_tag="VHX39_04220"
                     /inference="COORDINATES: protein motif:HMM:NF004811.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA acetyltransferase"
                     /protein_id="HEX3990359.1"
                     /translation="MKRGSAAIVGAAESDIGAVAALMSPIDLMAQGIQRALDDAGLSL
                     ADVDGVFSATSQARTSVMSLVEYLGLPDAYTDSTIVGGSSFEIHVAHAQAALEAGLCS
                     VAVIAYGSTQRTVGRRGASPREYNPYETPFRPFLPATAYAMAANRHMFEFGTTREQLA
                     EVAVAAREWALLNPAAWEKKPLSVADVLNARPISDPLTVRDCCLITDGGGAIVMTTAD
                     RARATRAKAVYVLGCGQSITHATISSMPDLTHTGAIQSGALAYRMAGMTASDIDVLAL
                     YDAFTINTILFLEDLGFCPKGEGGRFVSGGHIAPKGGLPVNTNGGGLSYCHPGMYGLF
                     LLIEAVRQLRGECGARQVPAANTAIVHGNGGVLSAQATVILGGAATL"
     gene            3397..3867
                     /locus_tag="VHX39_04225"
     CDS             3397..3867
                     /locus_tag="VHX39_04225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX3990360.1"
                     /translation="MPGRVELKLAELGISLPTTPMPPIANYVPYVVTGNLVAVSGQVP
                     AIDGKIAITGKVSWGVSVEQAKDAARLCFINVLGHLKVACGGDLDRVRRVVRLGGFVA
                     APSDFNQHAQVMNGASDLAVAVFGEAGRHARTTIGVPSLPADAAVEVEGLFEIE"
     gene            3878..5041
                     /locus_tag="VHX39_04230"
     CDS             3878..5041
                     /locus_tag="VHX39_04230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3990361.1"
                     /translation="MADDVTTTLTMSLHSAIKDIDRADWDACAGDGNPFVSHAFLSVV
                     EDSGSANARTGWVPQHAVLRNDGGTVVAVAPIYAKSHSYGEYVFDHGWANALERVGVN
                     YYPKLQVAVPFSPVPGPRLLRRPGTGVSIGVLADALEQACQAHDLSSVHVTFCQEDEW
                     HGLGDAGWLRRMGMQFHWENQGYTDFDDFLGALSSRKRKVLRRERRDAQGAGLTFQAL
                     SGADLKERHWDAFYRFYHSTVDRKWGSAYLTRKFFSMLGERLGDRVVLMVAENNGKPV
                     AGALNLAGSEALFGRNWGCIGDWPFLHFELCYYQAIDWAIAHGLKRVEAGAQGRHKIQ
                     RGYMPKPTYSAHWIAHTGLRRAVANFVDEERAGIEHDMRRLAEDSPFKKGGEE"
BASE COUNT          902 a         1477 c         1788 g         1069 t
ORIGIN      
        1 cggcattggc gcggccgacg cggtcgagga agcgatcaac gcccatggcg ccgacaccat
       61 cgccgcaatc atcgctgagc cggtaatcgg cgcgggtggc gtcatcgtac cgtcgccgac
      121 gtattttcct cggctgcggg agatttgcga ccgccacaac gtgctgctga tcgccgatga
      181 ggtgatcacc ggatttggcc gcaccggcaa gtggttcgct ctggaccact ggggcgtgca
      241 gcccgacctg atgtcgttcg ccaagggcgt caccagcggg tatctgccgt tgggcggcat
      301 catcgtctcg aagcgcatcc acgaagcgat ggaaaatgcg ccgatggatg agcggtatat
      361 gcacgccgcg acttattccg ggcatccggc ctgttgcgcc gtgggcctcg ccaatatcga
      421 cattattgaa cgcgagggcc tcgttgaacg cgcccaggtg gagggggacc gattccgggc
      481 ggggctgatg acgttggcgt cgttgcccaa cgtcggcgag gtgcgtggca tcgggatgct
      541 ggccgccatt gaactggtcg aggacaaagg cagcaagcag cctgcgctcg gtctgggtgg
      601 caaagttgtc ggagaattca tgaagcgggg cctgctgact cgccagcgcg gtggtgccga
      661 tggcccgccg gcgagcggcg atacgctggt gtttgcgccg ccgctgatga cgccggcagc
      721 gacattggac cggatcgtgc agattgttgg cgattcgatt gtcgcggcga ccgcgtaatc
      781 cggcccgccg cgtcgtttaa ccggggtctt gaacgggaac aaaccacgcc tatatccgct
      841 tgacagcgtg cgggagctta gctccgcgct gtgtgacgtt tcccccccaa acttggcggt
      901 gccttcgggc gccgcctttt tgtttgcgcc cgcccgcttc atggctacca tcctgggcgg
      961 aggctgccat gattttcccg gttccaaccc tcgatcacgt ggttatcaac gtccgcgacc
     1021 gcattgatga gggcgcggat acgtttcgcc ggctcggttt cacgctgacc cccaggggct
     1081 accacaccct gggttcgatg aatcatctgg cgatgttcgg cacggattac ctcgaattaa
     1141 tcgcggcgcg gccaggcgac acaaaacggc cggagatcat ggaagcgccg gagggcctga
     1201 atggccttgt gctcggcact gaagactctg ctgccacgta tgcggcgatg caacaggccg
     1261 gagtgccgat gttgccgcct ggcgagtttt cccggccggt cgccttgccc gacggcagca
     1321 gccgagacgc cgtcttccga acggtgcggc tggcacccgg aaccatcacg gcggggcgat
     1381 tatatttttg tcatcatttc acccgtgacc tggtttggcg ggatgaatgg cgccatcacg
     1441 ccaacggcgc gaccggcgtg gtccgcgcag tgatcgctga caccgaccca tccaaactcg
     1501 gcgcattgtt tggccgcatg tttggctcgg acgctgtccg cccgattgcc ggtggcctgg
     1561 ctttgacggt cggcgtatcg cgcttcgaca tcgttacgcc cgaagcattg cagattgagt
     1621 atggcgaact ggcgccggtt gccggtggca gggaaagctt catggcagca ctggtgtttc
     1681 gcacacgctc gctcgacgcc gcatggggtg cgttggagtc gggcggtatt ggcggggtgc
     1741 gccgggacaa cggtcaggtg atcgtgcccg ctgcctctgc gtgcggtgca acattggcat
     1801 tttgtctttg aaccgtcacg cggtagcctg agccgccaga ccaggagacg cccgcaccat
     1861 gccagccgac tcgcccttga cgacttacat cgcgcatttg gaacgcggcg agttggccta
     1921 tcagttcagc ccctcggcgg gaggcgcggt attctatcct cgcgtgatcg cccccgcgac
     1981 cggcaaggcg gatctggagt ggcgtgtcag caaggggttc ggctccgtcc acgcgacgac
     2041 ggtggtgcat ccgcagaagg gcgagccgta taacgttgcg ctgatcgacg tggacgaggg
     2101 gttccggatg atgagccggg tcgaggacat cgcgccagcc ctggtccgca tcggcatgcg
     2161 cgtgaagttc cgcacccatg gagcggaggg cgacgaaccg ccttatccgg tttttacccc
     2221 ggcggatgct gcgtgatgaa gcgaggttcc gccgctattg ttggtgccgc cgagtccgat
     2281 atcggggcgg tggccgccct gatgtcgcca atcgatttga tggcgcaagg gattcagcgg
     2341 gcgttggacg atgccgggtt gagcctcgcg gatgtcgacg gcgtattttc cgccacctca
     2401 caggcgcgca cctcggtcat gtcgctggtg gaatatcttg gcctgccgga tgcgtacacc
     2461 gattccacga tcgtcggcgg atcatcgttc gaaattcatg tggcgcatgc gcaggcggca
     2521 ctggaagccg gattatgttc ggttgccgtg atcgcttatg gcagcacaca gcgcaccgtt
     2581 gggcggcgcg gggcgagccc gcgggaatac aatccgtacg aaacgccatt ccggccattc
     2641 ctgcccgcca ccgcttatgc catggcagcg aaccggcaca tgttcgaatt cggcacgaca
     2701 cgggagcaac tcgcggaagt cgcagtggcg gcgcgtgaat gggcgctgtt gaatcctgcg
     2761 gcctgggaga agaagccgct gtcggttgcc gacgtgttga atgcgcggcc gatcagcgat
     2821 ccgctgacgg tgcgcgattg ttgtctgatc accgacggcg gcggtgccat tgtcatgacg
     2881 acagcggacc gagcccgtgc gacgcgggcg aaggcggttt acgtgctcgg gtgcgggcag
     2941 tcgatcactc atgcaacaat ttcgtcgatg ccggatctga cccataccgg tgcgatccag
     3001 tccggtgcgc tggcgtatcg gatggccggg atgacggctt ccgatatcga tgtgctggcg
     3061 ctgtatgacg cgttcacgat caatacgatc ttgtttttgg aagatcttgg cttttgccca
     3121 aaaggcgagg gcgggcggtt cgtgtccggc ggtcatatcg cgcccaaggg tggcctgccg
     3181 gtgaacacca acggtggcgg gctgtcctat tgccatcccg gcatgtacgg gttgttcctg
     3241 ctgatcgagg cggtcaggca gttgcgtggc gagtgcggtg cgcgccaggt tccggcggcg
     3301 aacacggcga tcgtgcatgg caatggcggc gttctttccg ctcaggcaac ggtcattctg
     3361 ggcggtgcgg caactttgtg atcaggagtg attgagatgc ccggtcgtgt cgaactaaaa
     3421 ctcgcggaac tgggcattag cctgccgacg acgccgatgc cgccaattgc gaattacgtg
     3481 ccttatgtgg tgaccggcaa tcttgttgct gtgtcgggac aggtcccggc gatcgacggc
     3541 aaaatcgcga ttaccgggaa agtcagctgg ggcgtctcgg ttgagcaggc gaaggacgct
     3601 gcccgtttgt gcttcatcaa cgtactgggc catcttaagg tggcgtgcgg cggtgatctc
     3661 gaccgcgtgc ggcgggtcgt ccgtctgggt ggcttcgttg ctgcgccgtc ggatttcaat
     3721 cagcatgcgc aggtgatgaa cggcgcctct gacctcgcag tcgcggtgtt cggcgaagct
     3781 gggcgtcacg ccagaaccac gatcggcgtg ccgtcgctgc ctgccgatgc ggcggttgaa
     3841 gtcgaaggtt tattcgaaat cgaataggaa gtgcgccatg gctgatgacg tgacgacaac
     3901 gctgaccatg agcctgcact ccgcgatcaa ggatatcgat cgggccgact gggatgcctg
     3961 cgcgggagat ggcaacccgt tcgtcagtca tgcgtttctg agcgtggtcg aggacagtgg
     4021 ctctgccaat gcgcgcacgg gatgggtgcc gcagcacgcg gtgttacgca acgatggcgg
     4081 aacggtggtg gcggtcgcgc cgatttacgc caaatcgcac agctacggcg aatatgtgtt
     4141 cgaccatggt tgggccaatg ccctggagcg agttggcgtg aactattacc ccaaactgca
     4201 ggtggcggtg ccgttcagtc cggttcccgg gcctcggctg ttgcgccggc cggggacggg
     4261 ggtgtcgatt ggggttctgg ctgatgcgct ggagcaggcg tgccaggcgc atgacctttc
     4321 ctcggtgcac gtaacgttct gccaggagga cgaatggcac ggcctgggtg acgccggctg
     4381 gctgcgccgt atgggaatgc agttccactg ggagaatcag ggatatactg atttcgacga
     4441 tttcctgggt gcgttgtcgt cgcgcaagcg gaaagtgctg cggcgggaac ggcgtgatgc
     4501 acagggcgcc gggttgacgt tccaggcgtt gtcgggggct gatctcaagg aacggcactg
     4561 ggacgcgttt taccggttct atcactcgac cgtggatcgc aaatggggtt cggcttacct
     4621 gacccgcaag ttcttttcga tgctgggaga acggcttggc gatcgggtcg tgctgatggt
     4681 tgccgagaat aatggcaagc cggtggccgg cgcactgaat ttggccgggt ccgaggcgtt
     4741 gttcgggcgc aactggggtt gtatcggcga ctggccgttt ttgcacttcg aactttgcta
     4801 ttaccaggcc attgattggg ccattgcgca cggactgaaa cgagtcgagg cgggggcgca
     4861 aggacggcat aaaattcaac gcgggtatat gccgaaaccc acgtattccg cacactggat
     4921 cgcgcatacc gggctgcgcc gcgcagtggc gaactttgtc gatgaggaac gggcagggat
     4981 cgagcatgat atgaggcggc tggcggagga ttcgccgttt aagaagggcg gcgaggagta
     5041 atcaccgcgg tcctgccggt taaggcttac gcagcgtctc gatacgcaac acgtcgggat
     5101 tgacaacgtt gatcggtcgt ccggcgtcat acgcaataat ctgagcgaag atatccgaaa
     5161 actgcgtctc gtattcgtcg cgtgacacgt agccgatatg cggcgtgcag atcacgttgt
     5221 ccatcgttaa taacgg
//
LOCUS       DATAVD010000226         2685 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1137529, whole genome shotgun sequence.
ACCESSION   DATAVD010000226 DATAVD010000000
VERSION     DATAVD010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2685
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1137529"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            250..627
                     /gene="rpsM"
                     /locus_tag="VHX39_04235"
     CDS             250..627
                     /gene="rpsM"
                     /locus_tag="VHX39_04235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEX3990362.1"
                     /translation="MARIAGVNIPTNKRVTIGLRYIYGIGPTKAAAICQQLSIPDDRR
                     VNQLSDEEILRIRELIDREYRVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQR
                     THTNARTRKGKAVAIAGKKKVTK"
     gene            709..1104
                     /gene="rpsK"
                     /locus_tag="VHX39_04240"
     CDS             709..1104
                     /gene="rpsK"
                     /locus_tag="VHX39_04240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEX3990363.1"
                     /translation="MAKPAAAARPRRKERKNIIAGVAHVAATFNNTVITITDAQGNAI
                     AWSSAGSQGFKGSRKSTPYAAQVAAEDAGKKAREHGMETLEIEVSGPGSGRESALRAL
                     QAVGFQVSTIRDMTPIPHNGCRPRKRRRV"
     gene            1223..2254
                     /locus_tag="VHX39_04245"
     CDS             1223..2254
                     /locus_tag="VHX39_04245"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010513068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEX3990364.1"
                     /translation="MRQSAVIQRNWQSLIKPEKLEVEPGADPSRVATVVAEPLERGFG
                     MTLGNAIRRILLSSLQGAAVTAVQIDGVLHEFSSVPGVREDVTDIVLNIKQLALRMHG
                     EGPKRMTLAATGPGEVRAGQIQSGHDIDIMNPELVICTLDDGVKLGMEFTVNLGKGYQ
                     PSSVNRPEDAPIGLIPVDSIYSPVRRVSYSVAPTRVGQVTDYDKLLLTVETNGAVTPE
                     DSVALAARILQDQLQLFINFDEPQQIRTEEPQDDLPFNRNLLRKVDELELSVRSANCL
                     KNDNIVYIGDLVQKSEQEMLRTPNFGRKSLNEIKEVLTSMGLGLGMSVAGWPPENIED
                     LAKRLEEPF"
     gene            2277..>2685
                     /gene="rplQ"
                     /locus_tag="VHX39_04250"
     CDS             2277..>2685
                     /gene="rplQ"
                     /locus_tag="VHX39_04250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEX3990365.1"
                     /translation="MRHGLSGRKLGVTSTHRLAMFRNMAHALLKHEQITTTLPKAKEL
                     RPVAEKLITLGKKGGLANKRLAYAELRDDVIVTKLFSTLADRYKTRAGGYTRVLKAGV
                     RYGDAADMAVIELIDRDVSAKGMDSGPVQEKEDD"
BASE COUNT          562 a          779 c          890 g          454 t
ORIGIN      
        1 aacggtggat gggatggcag atatcgacga agtcgcctgc caaatcgaca atgtcctggc
       61 gtcgacgtga caggattgtt gaaagtctca cgcagagttg ataagtcttc gttgactcct
      121 gcgcggcgga aactatagtc ccgcgctccg gcgcagcccc atatgggggt ttggcgccgc
      181 ttgcgcgtat ttcagccttt cggggcagtt agaggtccgg gtcagtcgcc ggacgacagg
      241 agagtaagcg tggcgcgtat tgccggcgtg aatatcccga cgaataagcg agtgaccatt
      301 gggcttcgct acatctatgg catcggcccg accaaggccg ctgcgatctg ccagcagctt
      361 agcattccgg acgatcgccg ggtcaaccag ctttcggatg aggagatcct ccgcatccgt
      421 gaactgatcg accgagagta tcgcgtggaa ggcgatctgc ggcgtgaagt ggcgatgaat
      481 ataaagcggc tgatggacct tggctgctat cgcggtctgc ggcatcgccg tgggttgccg
      541 gtgcgcggtc agcggaccca cacgaacgcc cgcacccgca agggtaaggc ggtggcgatc
      601 gccggcaaga agaaagtcac gaaataaagc aggcttaagg gcccgcctta tcgaatcatt
      661 atgccgtgcc ggttttcggc gcggcagttg aagcaggatc aaagacacat ggcgaaaccc
      721 gccgcagccg ctcggcctcg ccgcaaagag cgtaagaaca tcatcgcagg cgtggcgcat
      781 gtcgcggcta cgttcaacaa cacggtgatc acgatcaccg atgcccaggg caatgccatc
      841 gcgtggtcgt cggcgggaag ccagggcttc aagggcagcc gcaaaagcac cccctatgcg
      901 gcccaggtgg cagccgagga tgccggcaaa aaggctcgcg agcacggcat ggagacgttg
      961 gagatcgagg tcagcggacc tggttcgggg cgtgaaagcg ccctgcgggc tttgcaggcg
     1021 gtcggcttcc aggtttcgac catccgggac atgacgccga tcccgcacaa tggttgccgg
     1081 ccgcggaagc gccggcgggt ttgaagtttg agttcgcgcc ggccggcgcc gtccggccag
     1141 gggcggacca gaaggccgag gtttttgaca ctgtccaggg gacatcaacc gcgcccgacg
     1201 cggttcgaaa ggtgttggta gtatgaggca gagcgcagtt atccagagaa attggcaatc
     1261 tctgatcaag ccggaaaagc tggaagtcga gccaggcgcc gatccgtcgc gcgtcgccac
     1321 cgtcgtcgcc gaaccgctgg aacgcggctt tgggatgaca ctcggcaatg cgatccgccg
     1381 catcctgctg tcctcgctgc aaggcgcggc cgtcaccgcg gtgcagatcg acggcgtgct
     1441 gcatgagttc agcagcgtgc ccggcgttcg tgaggacgtg accgacatcg tgctgaacat
     1501 caagcagctc gcgctgcgga tgcacggcga ggggccgaag cggatgacgc tggcggccac
     1561 cggccccggc gaggtgcgtg ccgggcagat ccagtcgggc cacgacatcg acatcatgaa
     1621 cccggaactg gtcatctgca ccctggacga cggggtgaag ctgggcatgg aatttacggt
     1681 caacctgggc aaaggctacc agccgtccag cgtcaaccgt ccggaagatg cgccgatcgg
     1741 gctgatcccg gtggacagca tctactcgcc ggttcgccgc gtgtcctaca gtgttgcccc
     1801 gacccgcgtg ggtcaggtca ccgactacga caagctgctg ctgacggtgg aaaccaatgg
     1861 cgcggtgacc ccggaagact cggtggcgct ggcggcgcgc atcctgcagg accagttgca
     1921 gttgttcatc aacttcgatg aaccgcagca gatccgcacg gaggagccgc aggacgacct
     1981 gccgttcaac cgcaacctgt tgcgtaaggt ggatgagctg gaactgtcgg ttcgcagcgc
     2041 caactgcctg aagaacgata atatcgtcta tatcggcgat ttggtgcaga agtccgaaca
     2101 ggaaatgctg cgcacgccga acttcggccg caaatccctg aacgagatca aggaagtgct
     2161 gacctccatg ggtctcggcc tgggcatgag cgttgccggc tggccgccgg agaatatcga
     2221 agacctggcc aagcggcttg aagagccgtt ctgagctgga atagggaaac agatcaatgc
     2281 gtcacggatt atccggccgg aagctcggcg ttacctccac tcatcgcctg gccatgttcc
     2341 ggaacatggc gcatgcgctg ctcaagcatg agcagatcac cacgacgttg ccgaaggcga
     2401 aggagcttcg cccggttgcg gagaagctga tcaccctggg caaaaagggc ggcctcgcca
     2461 acaagcggct ggcctacgcc gaactgcggg acgacgtgat cgtcaccaag ttgttcagca
     2521 cgctggccga tcggtacaag actcgagccg gcggctatac gcgggtgctg aaagcgggtg
     2581 tccgctacgg cgatgcggcc gacatggcgg tgatcgaact gatcgaccgc gacgtctccg
     2641 ccaagggcat ggacagtggt ccggtccagg agaaggaaga cgaca
//
LOCUS       DATAVD010000227         2006 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2068688, whole genome shotgun sequence.
ACCESSION   DATAVD010000227 DATAVD010000000
VERSION     DATAVD010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2068688"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..226
                     /locus_tag="VHX39_04255"
     CDS             32..226
                     /locus_tag="VHX39_04255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990366.1"
                     /translation="MPTAFGVTVGVTRRVGIDAGGSCRGMWSRYLLVSMIEMPNALDV
                     DPSAPPCNRRGERRIRYPYL"
     gene            complement(1021..1740)
                     /gene="radC"
                     /locus_tag="VHX39_04260"
     CDS             complement(1021..1740)
                     /gene="radC"
                     /locus_tag="VHX39_04260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEX3990367.1"
                     /translation="MSFLPDLVPAPMDPVVAAGAEGHRMRMRQRLLRAGPDALADYEM
                     LEMILFIALPRRDTKPLARALLDRFRTFGGVLGAPPTELLAVDGIGEAGAAAIKLVQA
                     AALRMMRHEVAAQPILSTWERLTEYLTAAMGHERTEQFRVLFLDGRNKLIADEVQGTG
                     TINHAPAYPREVVRRCLELHASAVILAHNHPSGEPTPSREDVTLTGEIVRAAAVMGIA
                     VHDHIIIGRGKWLSFRAEKLF"
     gene            complement(1829..>2006)
                     /locus_tag="VHX39_04265"
     CDS             complement(1829..>2006)
                     /locus_tag="VHX39_04265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEX3990368.1"
                     /translation="MVNAGRPEVKVLDDGWTAVTRDRSLSAQFEHMIGVTDTGCEIFT
                     LSPAGLDKPPLGVS"
BASE COUNT          332 a          574 c          689 g          411 t
ORIGIN      
        1 tgactgtggt attgttgggt gaaaggcgtg gatgccgacc gccttcggcg tgacggttgg
       61 ggtcacccga agagtcggca tcgatgccgg tggttcttgt cgcggtatgt ggtcgcgtta
      121 tctgttggtt tcaatgattg aaatgccgaa cgcgcttgat gttgatccat cggcaccgcc
      181 gtgcaaccgt cgtggcgagc gcaggattcg ttatccatat ctttgatttt gctcgtaaaa
      241 ggcgtggata ccggcatgac gggcggggtc aacagacgag tcggcatcaa cgccggatgg
      301 tatgatatag cgaacgcgtt gggtgggacg tataacggtg cacagcgatg atcgctccat
      361 gcgggtcatt ccgtgtccgc cgtgttgacg gctgttggga gtgccaccct acttcgcggc
      421 gatggattgg gaagtaatca agcggatcgc ggagtttcgc tgagttcgcg cggagtttct
      481 cggaggagtg ctggatttga cttgtggatt cgatgccgat tgcgggtatt tcgcgcagtc
      541 ggcgagaggc gatcacggta ctggatgcta ctggctgaaa tttcttctcc gcgaggctcc
      601 gcgtgaactc agcggaactc cgcgtcattc ttgattactt tctcgcctac ggcattcacg
      661 gatcgtgcat ggttcgtgcg ggtgaaacaa cgaaatggcg gcagactacg gtatgattcc
      721 ggtccgctga aaaactgata ctgtgaagcc agcctctctc cgtcatgggg ggcgaagggg
      781 cgccgaccat gcctttgttt ccgcacatgc aggcgtggat gccgacctcc gtcggcatga
      841 cggacgaggc gaaccgaaga gtctgccgca aaacgacttg ggataagagc gatgccggtt
      901 gggatgagag cgatggcggt tgggataggc gctccagagg gagtgtggct gcctgatacc
      961 gtcgtggcga cgagaggcgg atgcactgtg cttgatgatt cgattattcc ttgcggcgct
     1021 tcaaaacagc ttctccgccc ggaaacttag ccacttgcct cgcccgatga tgatgtggtc
     1081 gtgcaccgcg atccccatca ccgccgccgc gcgcacgatt tcgcctgtca gggtcacgtc
     1141 ttcccgggac ggggtgggct cgccgctggg gtggttgtgc gccaggatca ccgcgctggc
     1201 gtgcagttcc aggcagcggc ggaccacctc gcggggatag gccggtgcgt ggttgatcgt
     1261 tccggtcccc tgcacttcat cggcgatcag cttgttgcgg ccgtccagga acagcacgcg
     1321 gaactgttcg gtgcgctcgt ggcccatcgc ggcggtcagg tattcggtca ggcgctccca
     1381 cgtcgacagg atcggttgag ctgcgacttc gtgccgcatc atccgcaggg ctgccgcctg
     1441 caccagcttg atcgccgccg cgccggcctc gccgatcccg tccacggcca gcagttccgt
     1501 tggcggcgcc ccgaggaccc cgccgaaggt gcggaaccgg tccagcagcg cgcgggccag
     1561 cggtttcgtg tcgcgccggg gcagcgcgat gaacaggatc atctccagca tctcgtaatc
     1621 ggccagtgcg tcgggtccgg cccgcagcag gcgctggcgc atgcgcatgc ggtgtccctc
     1681 ggcgcctgcg gcgacaacgg ggtccatcgg tgcgggcacc agatcgggca ggaacgacat
     1741 ttcggccata ccggccggct tcgggcgttt ggacatgggg ctcgcggcgt gacggtcgcc
     1801 gcgcagccta gaaggcaaat gttgccaatc agctaacgcc gagcggcggc ttgtccaatc
     1861 cggcggggga gagggtgaag atctcgcagc cggtgtcggt gacgccgatc atgtgctcga
     1921 actgggcgga caggctgcgg tcgcgggtga ccgcggtcca gccgtcgtcc agcaccttca
     1981 cctcggggcg gccggcgttc accatc
//
LOCUS       DATAVD010000228         1690 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3372532, whole genome shotgun sequence.
ACCESSION   DATAVD010000228 DATAVD010000000
VERSION     DATAVD010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3372532"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1690
                     /gene="dnaE"
                     /locus_tag="VHX39_04270"
     CDS             <1..>1690
                     /gene="dnaE"
                     /locus_tag="VHX39_04270"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEX3990369.1"
                     /translation="SEGAIKVDQIAALARAALMPAVAITDTGNLFGALEFSQYCSGKG
                     VQPIIGCQIALTRADNPRLAPDPLVLLARDAAGLANLQRLSSIGFLDTDPSLKPSLPL
                     DVIRAHADGLFLLTGGTNGPIARLLAEGQRPEAERLLAALAEAFPERTIMELHRHRLP
                     VEQAIEPGLIAMADALGLPLAATNDCMFATESMYEAQDALLCIAEGRLLSEQDRRRVT
                     PEHWFKPAPVMRALFADLPEACDNTIAIAQCCAVMAETRKPLLPVSPKVHDGATEEET
                     VRAMAIEGLQARLDDIEADAAARTKYRERLDYELDVIASMGFSGYFLIVADFIQWAKQ
                     QGIPVGPGRGSGAGSVAAWSLTITDVDPIRFNLIFERFLNPERVSMPDFDIDFCQEGR
                     DRVIEYVRQEYGADRVAQIITFGKLQARAAVRDVGRVLGLPYGQVNRVAELIPNNPAK
                     PVTLQQALDGEPRLQALRDSDEGIARLLEIALQIEGLYRHASTHAAGVVIGDRPLVEL
                     VPLYKDPKSDFLVTQYSMKHVELAGLVKFDFLGLTTLTILDRAENFLSKLGTPI"
BASE COUNT          317 a          520 c          511 g          342 t
ORIGIN      
        1 tcagcgaggg cgccatcaag gtcgatcaga ttgccgccct ggcccgtgct gccttgatgc
       61 ccgccgtcgc catcaccgac accggcaacc tgttcggtgc gctggagttt tcccagtatt
      121 gttccggcaa aggcgtgcaa cccatcatcg gctgccagat tgccctgacc cgcgccgaca
      181 atccccgcct cgcgcccgac ccgctcgtgc tgctggcgcg cgacgcggcg ggattggcga
      241 acctgcagcg cctgtcgtcc attggtttcc tcgacaccga tccatcgctg aaacccagtc
      301 tgccgctcga cgtgatccgc gcgcatgcgg acggactgtt cctgttgacc ggcggtacca
      361 acggtccaat tgcgcggctg ctcgcagagg ggcagcgacc ggaagcggaa cgcctgctcg
      421 cggccctggc cgaagcattt cctgagcgca ccattatgga attgcaccgg catcggctgc
      481 cggtcgaaca ggcgatcgaa cctggcctga tcgcgatggc agatgcgttg ggtctgccgc
      541 tcgccgcgac caacgattgc atgttcgcaa cggagtcgat gtacgaagcc caggatgcct
      601 tgctgtgtat cgccgagggg cggttgctgt cggagcagga ccgcagaagg gtaacgccgg
      661 agcactggtt caagccggca ccggtgatgc gtgctctgtt tgccgatttg ccggaagcct
      721 gtgataacac tattgcgatc gcgcaatgct gtgcggtgat ggcagaaacc cgtaagccct
      781 tattgccggt ttcaccaaaa gtccacgacg gcgccaccga ggaagaaacc gttcgcgcca
      841 tggcgatcga gggtttgcag gcccggcttg acgacatcga agctgatgcc gcggcccgaa
      901 cgaaataccg cgagcgtctc gattacgaac tcgatgtgat tgcctcgatg gggttctctg
      961 gttatttcct catcgttgcg gatttcatac aatgggcgaa acaacagggc atccctgtcg
     1021 gtcccggccg tggctccggt gccggttccg tcgccgcctg gtcattgacc attaccgacg
     1081 tggatccgat ccggttcaat ctgatcttcg aacgattcct gaatccggaa cgtgtgtcga
     1141 tgcctgactt cgacatcgac ttttgccagg aaggccgcga ccgggtgatc gaatatgtgc
     1201 gtcaggaata cggcgccgac cgcgttgcgc aaatcatcac attcggcaaa ctacaggccc
     1261 gtgcggcggt gcgtgatgtg gggcgagtcc tcggtctgcc atacggtcag gtcaaccggg
     1321 tcgccgaatt gatccccaat aacccggcaa aaccggtcac gctgcaacag gcgctggatg
     1381 gcgagcctcg tcttcaggcg ttgcgcgatt ccgatgaggg aattgcccgg ctgctggaaa
     1441 tcgcattgca aatcgagggt ctttaccgcc acgcttccac tcacgcggcc ggtgtggtga
     1501 tcggcgaccg gccactggtg gagctcgtgc cgctctacaa agatccgaaa tccgatttcc
     1561 tggtcacgca atactcgatg aagcatgtcg aactggcggg gctggtcaaa ttcgacttcc
     1621 tcggtttgac cacgctgacg atcctggatc gcgccgagaa tttcctgagc aagcttggca
     1681 cgccaatcga
//
LOCUS       DATAVD010000229         1627 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2999075, whole genome shotgun sequence.
ACCESSION   DATAVD010000229 DATAVD010000000
VERSION     DATAVD010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2999075"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..614
                     /locus_tag="VHX39_04275"
     CDS             <1..614
                     /locus_tag="VHX39_04275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020591564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX3990370.1"
                     /translation="YYALNTCVLASHIALKDAGAPYDLQRVDFRTTQQQSPDYVAINP
                     KARVPAMVTPGGILTETPAILAFIAQSFPAARLAPLDDPFAFAEMQAFNSYLCSTVHV
                     AHAHRMRGTRWADDPASFADMKRKVPQTVTACFKLIESRMLKGPWVLGEAYTVADPYL
                     FTLAQWLEDDGVDPAGIPKVMDHRVRMLERRNVQQALAEERAA"
     gene            786..>1627
                     /locus_tag="VHX39_04280"
     CDS             786..>1627
                     /locus_tag="VHX39_04280"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3990371.1"
                     /translation="MTLSRRSLIHLVGKAGGEAAAYQTMAAMGLLAVPSAYGGPPALP
                     PGRGRQVVIIGAGIAGMVLAFELRQAGYRPLVLEARSRPGGRNWSLRGGDTVVETGST
                     QHVPWDRDDHLYFNPGPARIPHHHEGILSYCRLLGVPLEVMCNDNRAALMQDDHAFGA
                     APQLNRRVVNDARGYVAELAAKAVDKDLLSQPVSTLDKERLRAFLRGFGALDQDLAYR
                     GSARAGWSLPPDATQGGTPNPPLDLRVLLASDFWQGPMQFGELPTMAATMLQPVGGMG
                     RIGEA"
BASE COUNT          289 a          515 c          519 g          304 t
ORIGIN      
        1 tgtactacgc tctgaatacc tgtgttctgg catcgcacat tgcgctcaag gacgccggag
       61 cgccgtacga cctgcaacgc gtcgacttcc gcacgacgca acagcagtcg cccgattacg
      121 tcgcgatcaa cccgaaagca cgcgtgccgg cgatggtaac gccgggcggc attctgaccg
      181 agactccggc gatcctcgcc ttcatcgcgc agagttttcc cgcggcacgg cttgctccac
      241 tggacgatcc attcgccttc gccgaaatgc aggcgttcaa cagttacctt tgctcgaccg
      301 tgcatgtggc ccatgcgcac cgcatgcgcg gaacccgttg ggctgatgat ccagcatcgt
      361 tcgccgacat gaaacgcaaa gtgccgcaga ccgtcacggc ctgtttcaaa ctgatcgaga
      421 gccgcatgct gaagggccct tgggtactgg gcgaggccta taccgttgct gacccctact
      481 tatttacgct agcgcaatgg ttggaggacg acggcgtcga tcccgcgggc attcccaaag
      541 tgatggatca tcgcgtcagg atgctggaac gccggaatgt gcagcaggcc ctggccgagg
      601 aacgggctgc ctgaccgccg gaatcatacg aatgcgatac gacccttctg gtcatcgcca
      661 gcgcaacgaa gcgatcgcgc aaaagttgca tatcgacaac gtgattgctt cgtgtcgtta
      721 tcggcaacga agatcagcaa cctacgagga cgttgcgatg acggccgccc gagcgttggg
      781 ctgacatgac cctgtcacgc cgatcgttga tccatctggt cggtaaggcc ggcggtgaag
      841 cggcggcgta ccagacgatg gctgcgatgg gcctgttggc ggtaccatcc gcctatggcg
      901 gtccgccggc actgccacct ggccgcgggc ggcaggttgt tatcatcggc gccgggatcg
      961 ccggcatggt gctggctttc gaactgcgtc aggccggcta ccggccactg gtcctggagg
     1021 cacggtcgcg cccaggcggc cgcaactggt cgcttcgcgg cggcgacact gtggtcgaaa
     1081 ccggctccac gcagcacgtc ccctgggacc gcgacgatca tctttatttc aatcctgggc
     1141 cggcgcgcat tccgcatcat cacgagggca ttctgtcgta ttgccgcctc ctcggcgtgc
     1201 cgctcgaggt gatgtgcaac gataatcgcg cggcgctgat gcaggacgac cacgccttcg
     1261 gtgctgcacc gcaactcaat cgccgggtcg tgaatgacgc acgcggctat gtggcggaac
     1321 tggcggccaa ggcggtggac aaggacttgt tgtcgcagcc ggtcagcacg ctggacaaag
     1381 agcggctgcg cgcctttctg cgcgggtttg gcgctctgga ccaggatctg gcctatcgcg
     1441 gctcggcccg cgccggatgg tcactgccgc cggatgccac ccaaggcggc acgcccaatc
     1501 ccccgttgga tctccgggtg ctgctggcgt cggatttctg gcaggggcca atgcaattcg
     1561 gcgaattgcc gaccatggcg gcgaccatgt tgcagccggt cggcggaatg ggccgcatcg
     1621 gtgaggc
//
LOCUS       DATAVD010000230         1708 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3372699, whole genome shotgun sequence.
ACCESSION   DATAVD010000230 DATAVD010000000
VERSION     DATAVD010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3372699"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..109)
                     /locus_tag="VHX39_04285"
     CDS             complement(<1..109)
                     /locus_tag="VHX39_04285"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3990372.1"
                     /translation="MGMLDGKVAVVTGAGGGIGRATAIALAANGAQVVVN"
     gene            complement(178..969)
                     /locus_tag="VHX39_04290"
     CDS             complement(178..969)
                     /locus_tag="VHX39_04290"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3990373.1"
                     /translation="MNWIEVNGTSLRYELSGSGPKTLVLIHEMGGTLDSWDQGLGALN
                     NDRRVLRYDTRGAGLSEKIRGVVTWNNMADDLKALLAALGITGKVAIAGIAVGAAIGM
                     HFAVRNPDRAAALVLHGPAPGVSAERRQQTLERAAAVEAGGMRGVVETSLANSYPPVV
                     RHNEEVFRNFRARWLANDPQSFAAINRMLAAEDISAELTKIACPTLVTAGRHDGLRAP
                     AVIGPMAKQIPGAEFLELNTGHFASIQTPGTMSQAIHYFLHALGL"
     gene            1038..1658
                     /locus_tag="VHX39_04295"
     CDS             1038..1658
                     /locus_tag="VHX39_04295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX3990374.1"
                     /translation="MMTLHWSPRSPYVRKVMIAAHEMGLSERLRIVRTTVGGTTPHAE
                     LMRINPLGKIPTLELEDGSVIYDSPVIIEYLDTLHTGPKLYPAAWPERLTALRRHALG
                     QGMLDNALPLLGEGFRPAERQSEPHKELWRAKLRACVDTLEHEAEALGASAFTVGHLA
                     IGVALAYLDFRFADMAWRDGHPGLAAWHATFDARPSVQANLPVDDR"
BASE COUNT          314 a          534 c          512 g          348 t
ORIGIN      
        1 cgttgaccac gacctgagcg ccattggcgg cgagtgcgat tgcagtcgcc cggccgatcc
       61 ctccaccggc accggtgacg acggcaacct tgccatccag cattcccatt gcatttcctc
      121 cttgaaaatc ggaaccgaga cagaatgcgt caggacgcga gccgtgtcat ctccccgtca
      181 cagccccaga gcgtgcagga agtaatggat cgcctgcgac atggtccccg gcgtttggat
      241 cgaggcgaaa tgtcctgtat tcaactccag aaattccgcg ccggggattt gcttcgccat
      301 cggtccgatc acggccggcg cgcgcagtcc atcgtgccgt ccggctgtca ccagtgtggg
      361 acaggcgatt ttcgtcagtt ccgcggaaat gtcctccgct gcaagcatgc ggttgatcgc
      421 cgcgaaactc tgcggatcgt tggccagcca gcgcgcacgg aaatttcgga acacctcttc
      481 gttgtggcgg acaacgggcg ggtaggagtt tgccagactg gtctcgacaa cgcctcgcat
      541 tccgccggcc tcgactgcgg cggcgcgttc cagcgtctgt tgccgccgtt ccgccgaaac
      601 cccgggcgcg ggcccgtgca ataccagcgc agcagcgcgg tccgggttgc gcacggcgaa
      661 atgcatgccg attgcagcac ccaccgcaat gccggcgatc gcgaccttgc cggtaatgcc
      721 caaagcagcc agcaaggctt tcagatcgtc cgccatgttg ttccaggtga ccacgccgcg
      781 aattttctcc gacaacccgg cgccgcgcgt gtcgtaacgc agcacgcggc ggtcattgtt
      841 cagtgcgccc agtccctggt cccaactgtc gagggtaccg cccatctcgt gaatcagcac
      901 caacgttttg gggccgctgc cgctgagctc ataacgcaga ctggtgccgt tgacttcgat
      961 ccagttcatg gtgaacgttc ccttgcatcc ctggtcgaag ttttgtccct gccgccgaat
     1021 tcgtaaaggt cctgcccatg atgactttgc actggtcgcc tcgttcccct tacgtcagga
     1081 aggtgatgat tgccgcgcat gagatggggc tgtccgagcg gctgcggatc gttcgcacga
     1141 ccgttggcgg gaccacgccg catgccgaac tgatgcggat caatccgttg ggaaagattc
     1201 cgacactgga actggaagat ggttcggtga tttacgattc accggtgatc atcgaatatc
     1261 tcgacacgtt gcatacgggt ccgaaacttt accccgctgc gtggccggaa cgtctgacgg
     1321 ctttgcgccg tcacgctctg gggcagggta tgttggacaa cgcactgccg ttgctgggtg
     1381 aggggttccg tcccgccgaa cgccaaagcg aaccgcataa ggaattatgg cgtgcgaaac
     1441 tgcgtgcctg cgttgacacg ctggaacacg aagcggaggc gcttggcgcc agtgccttca
     1501 ccgtcggtca cctggccatc ggcgtggcgc tggcgtatct ggatttccgc tttgccgaca
     1561 tggcctggcg agacggccat cctgggcttg ccgcctggca tgcaacattc gatgcgcgac
     1621 cctcggtgca ggcaaatttg ccggtggatg accgctagat aacacgccag gtaacgcaag
     1681 catcgatcaa tcagtctgag gacatttt
//
LOCUS       DATAVD010000231         1600 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2069217, whole genome shotgun sequence.
ACCESSION   DATAVD010000231 DATAVD010000000
VERSION     DATAVD010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2069217"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1383)
                     /locus_tag="VHX39_04300"
     CDS             complement(<1..1383)
                     /locus_tag="VHX39_04300"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF004816.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX3990375.1"
                     /translation="MAIEPARRTFLAGAAAAAIATEAMPARAAQADMAYRRATDLIEA
                     LVTKTVSSRELVDAAIARIEAHDSKINAVVVRDFAVARAAADAADAALARGERRPLLG
                     LPMTVKEQFNIAGLPTTWGQPAFKNWQPTEDALVVARLKAAGAVILGKTNVPLNLSDW
                     QSYNDIYGTTNNPWDLTRTPGGSSGGSAAALAAGYVALELGSDIGGSLRIPAHFCGVY
                     AHKPSLDLVPQRGGGPPETPAIPFRGDLAVTGPMARSATDLALELGVISGPDERWDGI
                     GYQLALPPARHAALKDFRVLVLDSHPLCPTASSITGALNRLAERLGKTGCSVLRTSPL
                     LPDLARTARIYVELLSAFRGVDLPADERQRVQSAASALHPGDESIRAWRLRGLTTNYL
                     DWVGASRVRAGLTQRWQALFRDVDVVLCPPMPSLAFSHDHSPGRTRRLDIDGKSVTYG
                     DQIVWISIATL"
     gene            complement(1418..>1600)
                     /locus_tag="VHX39_04305"
     CDS             complement(1418..>1600)
                     /locus_tag="VHX39_04305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990376.1"
                     /translation="WLGAPDPAGQDKAARALSHVAMTDVGATPVGQWYGKTAFRRSIT
                     GVLQGVSPYPWSVRPA"
BASE COUNT          286 a          526 c          519 g          269 t
ORIGIN      
        1 taacgtcgcg atgctgatcc aaacgatctg atcgccgtag gtgaccgatt tgccgtcaat
       61 atcgaggcga cgcgtacggc ccggcgaatg gtcatgcgaa aacgccaggc tcggcatcgg
      121 cgggcacagc acgacgtcga catcccggaa cagagcctgc cagcgttgcg tcaaaccggc
      181 gcggacgcgg ctggccccga cccagtcgag gtagttggtc gtcaaaccac gcaatcgcca
      241 ggctctgatg ctttcatcgc cggggtgcag cgcgctggct gcactctgga cgcgctgacg
      301 ctcatcagcc ggcaaatcga cgcctcggaa ggccgacagg agttccacgt aaattcgtgc
      361 ggttcgcgcg agatcgggta gcagcggact cgttcgcaaa accgagcaac cggtctttcc
      421 caaccgctcg gcgagccggt tcagtgcacc ggtaatgctg ctcgcggtgg ggcaaagcgg
      481 gtggctgtca agcactaata cgcggaaatc cttgagcgca gcgtgacggg caggtggcag
      541 ggcgagctgg tagccaatcc catcccacct ctcgtccggc ccagagatca cgcccagttc
      601 gagggccaga tcggtggcac tccgcgccat cgggccggtg accgcaagat cgccacggaa
      661 tggaattgcc ggcgtttcgg gcgggccgcc accgcgctgc ggcaccagat cgagacttgg
      721 cttatgcgcg taaactccac aaaaatgcgc cggtatacgc aacgaaccgc ctatgtccga
      781 accgagttcg agcgccacgt atccggctgc caacgccgcc gccgacccgc cggacgatcc
      841 gcccggtgtc cgggttaggt cccagggatt gttggtggtg ccatagatat cgttgtagct
      901 ctgccaatcg gacaggttga gcggaacatt ggttttgccg aggatcacgg caccggccgc
      961 cttcagccgc gccacaacca atgcgtcctc agtcggctgc cagttcttga acgccggctg
     1021 gccccaggtc gtgggcagtc cggcaatgtt gaactgttcc ttaacggtca tgggcaaacc
     1081 cagaagcggc cggcgctcgc cccgggccag agccgcatcg gcggcgtcgg cggcggcgcg
     1141 cgccactgcg aagtcgcgca cgaccacggc gttgattttg ctgtcgtggg cttcgatccg
     1201 ggcaatcgcc gcatcaacga gctcacgcga ggagacggtc ttggtgacca gcgcctcgat
     1261 caggtccgtt gcccggcgat acgccatgtc agcctgggcc gcacgcgccg gcatggcctc
     1321 ggtggcaatc gccgcggcgg cggcccctgc caggaaggtg cgccgagcgg gttcgatggc
     1381 catgggtcag ctcctttcgc gccggtgttc ttcgggccta agcgggccgg acgctccagg
     1441 gatacggcga tacgccctgc aaaacgccgg taatactgcg gcggaaagcg gtcttcccgt
     1501 accactgtcc gaccggtgtc gcgcccacgt cggtcattgc cacatgcgac agcgctctgg
     1561 ccgccttatc ctgaccggct gggtccggtg cgccaagcca
//
LOCUS       DATAVD010000232         7710 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_394299, whole genome shotgun sequence.
ACCESSION   DATAVD010000232 DATAVD010000000
VERSION     DATAVD010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7710
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_394299"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..831
                     /locus_tag="VHX39_04310"
     CDS             <1..831
                     /locus_tag="VHX39_04310"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3990377.1"
                     /translation="LANRVAMLDHLSEGRLLFGVAASGLPSDWAMFDVDGTTGKHREM
                     TREALDIILRMWSDEPTFEFKGKYWNVAKPELMYGFLKPHIKPFQKPHPRIGVAGLSP
                     NSDTLKMAGEHGFMPLSLNLNAGHLVTHWAAVEEGARRTGKTPKRADWRVFREVFVAE
                     TDEQAYELSVGGMMGRMMREYFLPLLGQFGYLKYLKHDESIPDSDVTPEYCAKHNWLI
                     GSPETVARKMEKIYNDVGGFGGVLVFGFDYSENPNAWHTSLRLLAEEVAPRIRHLTPA
                     "
     gene            828..2096
                     /locus_tag="VHX39_04315"
     CDS             828..2096
                     /locus_tag="VHX39_04315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEX3990378.1"
                     /translation="MSRVLHRTGAIPPVAVRGDGIWLHTADGRAIIDASGGAAVAALG
                     HGNRRVAEAIARQASTMAYAHTGTFSNQPAEELADILLADEPGGLTRAWFCSSGSEGN
                     EAALKLARQYFLEIGQPGRVRTIARRQSYHGTTLGALAAGGNMMRREYYEPILSRTHS
                     LVSPCFAYRFKFDGETDATYLERLGTELEAEFQRVGPDTVIAFLAEPVVGATTGCVTA
                     IPGYFRRVREICDRHGALLILDEVMCGMGRTGTMHAWEQEGVTPDIQVIAKGLGGGYQ
                     PIGGILIVDRIVHALAAGTGGFLHGQTYQAHPVACAAALEVQRVIRDDGLLDNVRVMG
                     ARLETALTERFGNHRHVGDVRGRGLFWALEFVADRGSKQVFDPGLKLNERVKAEAFAR
                     GLAGYPMGGTIDGKRGDHYIIAPPYIVTAA"
     gene            complement(2152..3021)
                     /locus_tag="VHX39_04320"
     CDS             complement(2152..3021)
                     /locus_tag="VHX39_04320"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3990379.1"
                     /translation="MSMTFKAGDATIHRIVEMECGFTPALEFLPNLTKQVLDENRSWL
                     HPAAMDASDNLVLCFQSYVIQTGKHNILVDSCIGNDKERTARPLWHKKKDNAFMQGLA
                     AAGLTVNDIDFVLCTHLHVDHIGWNTRLENGRWVPTFPKARYIFSKKELDFWLDEAKK
                     TDLPQIDDSVVPIVEAKMCDVVTSDHALNDLIALIPTPGHTIDHYAVTLGKGGKDAVF
                     TGDLIHTPLQALHPELTMRVDYDPAQGAASRRRFLETYCDTNTLCCFAHFPSPSKGFV
                     RRWGNGFKCDYVS"
     gene            3098..3610
                     /locus_tag="VHX39_04325"
     CDS             3098..3610
                     /locus_tag="VHX39_04325"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3990380.1"
                     /translation="MADAAALSPETVMRQMKQNGVTDIVWLPDSETNWLFLLMQADPD
                     LRLIGVTREGHACSIAAGLFAGGRKPMMLIQNTGMMESGDSIRGWLMGLKVPIVLLVG
                     YRGYTRHGVNSDTAATYTERFLMAFGIPFYLVENDGDADRIAIAFKEAEQIKGPVVVL
                     VGDEYHGFNR"
     gene            3623..4204
                     /locus_tag="VHX39_04330"
     CDS             3623..4204
                     /locus_tag="VHX39_04330"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX3990381.1"
                     /translation="MMHTADLLKVFAEHRGDAIVISGRGGRHWINISDTVMDVPLGDP
                     AMGGHSGFGLGLALAQPGRKVILFDSEGDILMSMGQLATIAEQAPTNFYHFILDNEVY
                     ATTGGQPVPNSKNVDYAMIARGAGYPRAVNFSEFGAFSAELPGILKTPGPVFVALKVW
                     PEVENTPIGQRVRWRKRSSDKVVQDLRGALAAG"
     gene            complement(4253..5512)
                     /locus_tag="VHX39_04335"
     CDS             complement(4253..5512)
                     /locus_tag="VHX39_04335"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3990382.1"
                     /translation="MRLMWFHLMPYTELPDDFREKHHSVWVDIHSSLFDPKRAHLMYN
                     DFMDEMEFAADCGFDAVCCNEHHSNGYGLMPSPNLIASALSRRTKDTAICVMGNSLAL
                     YNPPTRVAEEFAMIDCISGGRLIAGFPVGTPMDTTYCYGQNPSMLRERYLEAHDLVMR
                     AWTEKDTFAFNGRYNQQRYVNIWPRPVQNPHPPVWIPGGGSIETWQWCAEMDYVYAYL
                     SYFGYKDGKETMDGFWKEMARLGKDRNPNRAAFLQFVGVAETREKAMELYREPAEYFY
                     GRCLFTDPMWAGPPGYITEATQRAGLTSQVGRAATQSARTQARATEMADIVDKGYVIV
                     GSPDDVVAQLTEVAESLNVAHLMLLLQFGNMNKDLAKFNTKLFAEKVMPRLQPLFSEW
                     EDRWWPTPMQTTERAEVPAFVPGLAAE"
     gene            5646..6782
                     /locus_tag="VHX39_04340"
     CDS             5646..6782
                     /locus_tag="VHX39_04340"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEX3990383.1"
                     /translation="MASHWVGTWTATPAPADGVALSSPTIRMFPRVSIGGDTIRIRLS
                     NAAGTGDLVIGATHVARRAAGAAIQPATDRIVTFNGASSVKIPAGSFVVSDPVSLTVA
                     PLEDLAVSIHVPGDIPASFGVTGRYARQFNYLSPPGDFTSMEAMFASRVIDDWFFLSG
                     IDVLAPHDVGGIVALGDSITDGNISTHDAFCRWPDQLARRLIARGGRQFGVMNQGLGG
                     NRICHDGRGDSGVRRFDRDVLSQPGVTHAIVVLGVNDLRNRSGLAHEVVTADDLILGL
                     NQMAMRARARGIKMFGGTITPFENETFMLGAWSPEKEAKRIAVNEWMRGSGAFHAVID
                     FDKFLRDPDHPARMLPIYDNGDHLHPGDVGYNRMGDVIDLALFD"
     gene            complement(6779..>7710)
                     /locus_tag="VHX39_04345"
     CDS             complement(6779..>7710)
                     /locus_tag="VHX39_04345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HEX3990384.1"
                     /translation="LVLLVDDEARLWLYRWPPYVAIGIALVIFSPVCIWNADHHWASF
                     DFQAARAGGWHFHPLAPLTTLGGEALFVLPWFWLPMVILGARSFRAGWREQLLAWLAA
                     PPIVIFALVSAWSSQRVLFHWAAPGYLMLFPVLGRYVATRWERRGVRAAIIGTAVFCL
                     VSMTVVSSQLQFDWLRAVMPKKDPTAEGINWTSLRNDLAARGLLQPGTVVGVPDWRDA
                     GKIGYALGPQVTVLCLNHDSREFGFSDPPERWKGADILLLIVDHPDTVLPVLGNQFAR
                     IELLPPSSITLRGRVLRTVTVAIGRTFSPQPPG"
BASE COUNT         1492 a         2222 c         2453 g         1543 t
ORIGIN      
        1 ctggcgaacc gtgtggccat gctggaccac ctgtccgagg gccgtctgtt gtttggtgtc
       61 gctgcctccg gtctgcccag tgattgggcg atgttcgatg tcgatggcac gaccggcaaa
      121 catcgtgaga tgactcgcga agcgctggat atcatcctgc gtatgtggag cgacgagcca
      181 acctttgaat tcaagggcaa gtactggaac gttgccaaac cggagttaat gtacggtttt
      241 ctgaagccgc acatcaaacc gtttcaaaaa ccgcatccaa ggatcggcgt tgccggtttg
      301 tcgcccaact ccgacacgct gaaaatggcg ggtgagcacg ggttcatgcc attaagtctg
      361 aacctgaatg ccggccacct ggtgacccat tgggccgctg tggaggaagg cgcgcgccgc
      421 accggcaaaa cgccgaagcg cgccgattgg cgggtatttc gcgaagtgtt cgtggcggaa
      481 accgatgagc aggcctatga attgtcggtg ggcggcatga tgggccgcat gatgcgcgag
      541 tatttcctcc cgctactggg ccagttcggc tacctgaaat acctcaagca cgatgagtcg
      601 atcccggatt ccgatgtcac gccggaatat tgtgcaaagc ataactggct gatcggctcg
      661 ccggagacgg tcgcgcggaa aatggagaag atctacaacg acgtcggcgg attcggcggg
      721 gttttggtgt tcggatttga ttactcggaa aatccaaatg cctggcacac ttcgcttcgg
      781 ctgttggcgg aggaagttgc ccctcggatt cggcatttaa cgccggcatg agtcgggttc
      841 tacatcgcac gggtgccatt ccccccgtcg ccgttcgcgg cgacgggatc tggctgcaca
      901 cggctgacgg gcgagcgatt atcgatgcct cgggtggggc cgcagttgcg gctttgggcc
      961 acggcaatcg ccgggtcgct gaggcgattg cgcgtcaggc ttcgaccatg gcctatgctc
     1021 acactggaac gttttccaat cagccggccg aggaactggc ggatattctg ctggccgatg
     1081 aaccgggcgg tctgacgcgt gcgtggttct gttcgtcggg gtcagaaggg aatgaggcgg
     1141 cgcttaaact ggcgcggcag tatttccttg agatcggcca gccgggccgc gtgcgcacga
     1201 ttgctcggcg gcagtcgtat cacggcacga cgttgggcgc attggcggct ggcggcaaca
     1261 tgatgcgacg ggaatattac gagcccattc tgagtcggac acacagcctg gtgtcgccgt
     1321 gttttgcgta tcggttcaaa tttgacggcg agacggatgc tacgtatctg gaacggttgg
     1381 gaaccgaact ggaagcggaa ttccaacgtg tcggccccga taccgtcatt gcgttcctgg
     1441 ccgagccggt ggtcggcgcg acgaccggct gtgtcaccgc catcccgggt tatttccgcc
     1501 gcgtgcggga aatttgcgat cgccatggcg ctctgctgat cctggatgag gtgatgtgcg
     1561 gcatgggccg caccggcacc atgcacgcct gggaacagga gggtgtcaca ccggatatcc
     1621 aggtcatcgc caaaggcctt ggcggcggtt atcagccgat cggcggaatt ttgatcgtag
     1681 atcgtattgt tcacgcgctg gctgccggaa ccggcgggtt cctgcatggc cagacctatc
     1741 aggcgcatcc ggttgcctgt gccgccgcac tggaagtgca acgggtgatc cgcgacgacg
     1801 gcttgctgga caacgtgcgg gtgatgggcg cccgactgga aaccgcgttg acggaacgct
     1861 tcggcaatca ccgccatgtc ggcgacgtgc gcggccgtgg gctgttctgg gctttggagt
     1921 tcgtcgccga tcgcggctcg aagcaggtat tcgatccggg gttaaaactg aatgaacggg
     1981 tgaaagccga ggcatttgca cggggtcttg ccggctaccc gatgggcggc acgatcgacg
     2041 gcaaacgagg cgatcattac atcattgccc cgccgtacat cgtcaccgcg gcttaaatcg
     2101 ataccagcgt cgcccgcctg ggtgaggcgg tcgacgcggc gatttctttg gtcagctaac
     2161 gtagtcgcat ttaaacccgt tgccccagcg cctgacaaaa cccttcgacg gcgacgggaa
     2221 atgcgcgaag cagcacagcg tgttggtgtc gcaatacgtc tccagaaacc gcctgcgtga
     2281 ggcggcaccc tgcgccggat cgtaatcgac ccgcatcgtc agttccggat gcagtgcctg
     2341 cagcggcgta tggatcaggt cgccggtgaa taccgcatcc ttgccgcctt tgccgagtgt
     2401 tacagcgtaa tgatcgatcg tgtggcccgg cgtcgggata agcgcgatca ggtcgtttag
     2461 tgcgtgatcg ctggtaacaa cgtcgcacat cttggcctcg acgatcggca cgacgctgtc
     2521 atcgatttgc ggcagatcgg tcttcttcgc ctcgtccagc cagaagtcca gttccttctt
     2581 ggagaaaatg tagcgcgctt tcgggaacgt cgggacccag cggccattct ccagccgcgt
     2641 attccagccg atatggtcga catgaaggtg cgtgcacagc acgaaatcga tgtcgttcac
     2701 cgtcaggcct gccgcggcga ggccttgcat gaacgcgttg tccttcttct tgtgccacag
     2761 cggccgagcc gtgcgttcct tgtcgttgcc gatgcagctg tcgaccagaa tgttgtgttt
     2821 gccggtttga atgacatagg actggaagca aagcaccaga ttgtcgctgg catccatcgc
     2881 agcgggatgc agccaggagc ggttttcgtc cagcacctgt ttggtcaggt tcggcaggaa
     2941 ctcgagcgct ggcgtgaagc cgcactccat ttcgacgatc cgatggattg ttgcgtcgcc
     3001 ggccttgaat gtcatgctca tgatccgggt ctccttcccc tttgcgaggc gctgaggtta
     3061 actgacggag acggttacgg ccagagggag agacgagatg gcagacgcag cagcgctgag
     3121 cccggaaacg gtaatgcggc aaatgaagca gaacggtgtg accgacattg tctggctgcc
     3181 cgacagcgag accaactggc tgtttctgtt gatgcaggcc gatccggatc tgcggctgat
     3241 tggggtgacc agggaggggc acgcgtgttc gatcgccgcc ggtctgtttg ccggcgggcg
     3301 gaagccgatg atgctgatcc agaacaccgg gatgatggag tccggtgact cgatccgcgg
     3361 ctggctgatg gggctgaaag tgccgatcgt gttgctggtt ggctaccgcg gttatacgcg
     3421 gcacggggtg aacagcgaca cggccgcgac gtatacggaa cggtttctga tggcgtttgg
     3481 cattccgttc tatctcgtgg agaacgacgg cgacgccgat cggatcgcca ttgccttcaa
     3541 ggaagccgag cagatcaagg gaccggtggt cgtgctggtc ggcgacgagt accacggctt
     3601 caaccggtag gagcgaacaa ccatgatgca cacagcagac ttgctgaagg tgtttgccga
     3661 acaccggggc gatgcgattg tgatttccgg tcgtggtggc cggcattgga tcaatatttc
     3721 cgacaccgtg atggatgttc ctctgggcga tccggcgatg ggtggacatt ccgggtttgg
     3781 tctgggcctg gcattggcgc aaccgggccg taaagtgatt ctgttcgatt cggagggcga
     3841 cattctgatg agcatggggc agctcgccac catcgccgag caggcgccga cgaattttta
     3901 tcatttcatt cttgataacg aggtatatgc aacgaccggt ggacagccgg tgccgaattc
     3961 gaagaacgtt gactatgcaa tgattgcgcg cggtgcggga tatccgcggg cggtcaattt
     4021 ttccgaattt ggtgcattca gtgccgagtt gccgggaatc ctgaagacgc caggcccggt
     4081 gtttgtggcg ttgaaggtgt ggccggaggt ggagaatacg ccgatcggcc aacgggtgcg
     4141 ctggcgcaag cggagttcgg ataaggtcgt gcaggatttg cgtggggctt tggctgccgg
     4201 gtgacgcgcg cttgtcgtca tggcaccgcc atgacgacaa ggacgctcgt tactactccg
     4261 cggcgaggcc cggcacgaac gccggtacct cagcacgttc cgtcgtctgc attggcgtcg
     4321 gccaccagcg gtcttcccac tcgctgaaca acggctgcaa tcgcggcatg accttttccg
     4381 cgaacagctt cgtgttgaat tttgccaggt ctttgttcat gttaccgaat tgcaacagca
     4441 acatcaggtg cgcgacgttc agcgattccg cgacctcggt cagttgcgca accacatcgt
     4501 ccggtgagcc gacaatgaca taccccttgt cgacgatatc agccatctca gtggcccgcg
     4561 cctgagttcg cgcgctttgc gttgcggcac ggccgacctg gctggtcagg cccgcgcgct
     4621 gagtcgcttc ggtgatgtac ccaggcgggc cggcccacat cggatcggtg aacaggcagc
     4681 ggccatagaa gtattcggct ggctcgcgat acagttccat ggccttctcg cgggtttccg
     4741 ccacgccgac gaactgtaaa aacgccgccc gattcggatt gcggtccttg cccaatcgag
     4801 ccatttcctt ccagaaacca tccatggttt ccttgccgtc cttgtaaccg aaatacgaga
     4861 gatacgcata gacgtagtcc atttcggcgc accactgcca ggtctcgatc gagccgccgc
     4921 cgggaatcca caccggcgga tgtggattct gcacaggccg tggccaaatg ttgacataac
     4981 gttgctggtt gtagcggcca ttaaacgcaa acgtgtcctt ctcggtccag gcgcgcatca
     5041 ccaggtcgtg tgcttccaga tagcgctcgc gcagcatcga tgggttctgg ccgtaacaat
     5101 acgtcgtatc catcggcgtg ccgaccggaa acccggcgat cagccggccg ccggagatgc
     5161 agtcgatcat ggcgaattcc tccgccacgc gggtcggcgg attgtacaaa gccagcgaat
     5221 tacccatgac gcagatcgcg gtgtccttcg tccggcgcga caacgccgaa gcgattaaat
     5281 tcggcgatgg catcagccca tagccgttgg agtggtgctc gttgcaacat accgcgtcga
     5341 acccgcaatc ggcagcgaac tccatctcat ccatgaagtc gttgtacatc agatgcgctc
     5401 gcttcggatc gaacagcgag gaatgaatgt ccacccacac ggaatgatgc ttctcgcgaa
     5461 aatcatccgg caattcggtg tacggcatca gatggaacca catgaggcgc atgaccagaa
     5521 ccctgaactg aggaagcgtt accggtcagt aggccggcaa accggctggt tcgtcaagct
     5581 ggacgtgcga cttgacggca gcgctggctt cgcctccgtt attccccaaa agaggaggca
     5641 acgacatggc atcgcactgg gttggcacct ggaccgcgac ccccgctccg gcggatgggg
     5701 ttgcgctcag cagtccgacg attcgcatgt ttccgcgggt cagtattggc ggcgatacaa
     5761 ttcgtatccg gctgtcgaac gcggctggca ccggggatct ggtgatcggc gcgacgcatg
     5821 tggccaggcg cgccgccggt gccgcgatcc agcccgccac cgatcggatc gttacattta
     5881 acggcgcgag ttcggtgaaa attcccgccg ggtcgttcgt ggtcagcgat ccggtctcac
     5941 tgaccgttgc accattggaa gatcttgccg tcagcatcca cgttcccggc gatatcccgg
     6001 cgagcttcgg ggtcaccggc cgctatgcgc ggcagttcaa ttacctctcg ccgccgggcg
     6061 atttcaccag catggaggcc atgttcgcga gccgggtcat cgacgattgg tttttcctgt
     6121 ccggcatcga tgtgctggca ccgcatgatg tcgggggcat cgttgcactc ggtgattcga
     6181 tcaccgacgg caatatttcg acccacgacg cattctgccg gtggccggat caactggcgc
     6241 ggcgcctcat cgcgcgcggc ggcaggcagt tcggggtaat gaaccagggc ctcggcggca
     6301 atcgcatttg tcatgacggt cgcggcgaca gcggcgtgcg gcggttcgat cgcgacgtgt
     6361 tgtcgcaacc cggggtcacg cacgcgatcg ttgttctcgg tgtgaacgac ctgcgtaacc
     6421 ggagcggcct cgcccatgag gtcgtcaccg cagacgacct gatcctgggc ctgaaccaga
     6481 tggccatgcg cgcccgggct cgcgggatca aaatgttcgg cggcaccatc acgccgttcg
     6541 agaacgagac tttcatgttg ggcgcctggt cgcccgaaaa ggaagcgaaa cgcatcgccg
     6601 tgaacgaatg gatgcgcggt tccggggcct tccacgctgt gatcgacttc gacaagttcc
     6661 tgcgcgatcc ggaccatcca gcgcgtatgt tgccaattta cgacaacggc gatcacctgc
     6721 atcccgggga tgtcgggtat aaccggatgg gcgatgtgat tgatctggcg ttgttcgact
     6781 aaccaggtgg ttgcggcgaa aatgttctgc cgatcgcgac ggtcaccgtt cgcagaaccc
     6841 ggcctcgcaa cgttatcgat gatggcggca gcagctcgat ccgcgcaaac tggttgccca
     6901 ggactgggag cactgtgtcc gggtgatcga cgatcagcaa caggatatcg gcgcctttcc
     6961 atcgctcggg cggatcgctg aagccaaact cgcgcgagtc gtggttcagg cagagcaccg
     7021 taacctgagg tcccagggcg taaccgatct tgccggcgtc gcgccaatcc ggcacgccga
     7081 cgaccgttcc gggttgtaac agaccgcgcg cggccaggtc gttgcgcagc gaggtccagt
     7141 tgatcccttc agcggtcggg tccttcttcg gcatgaccgc acgcagccaa tcgaattgca
     7201 attggctgct gacgactgtc atgctcacaa ggcaaaacac tgcggtgccg atgattgccg
     7261 cgcggacgcc tcggcgctcc caccgggtgg cgacgtaacg gcccagtact ggaaacagca
     7321 tgagatagcc gggtgccgcc caatgaaaca gcacgcgctg cgaggaccag gcggaaacca
     7381 gtgcgaagat cacgattggc ggcgcggcga gccaggccag cagttgctct cgccaaccgg
     7441 cacgaaacga gcgggcgccc aggataacca tgggcaacca gaaccagggc aggacgaaca
     7501 gcgcctcgcc accgagcgtg gtcagcggcg ccaacgggtg aaagtgccaa ccgccggcac
     7561 gcgccgcctg aaagtcaaac gaagcccagt ggtgatcggc attccagatg cagacagggg
     7621 aaaatatcac cagggcgatg ccgatcgcga cataaggcgg ccaccggtac aaccacaggc
     7681 gagcttcgtc atcgaccaac aagaccaaac
//
LOCUS       DATAVD010000233         1977 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2629604, whole genome shotgun sequence.
ACCESSION   DATAVD010000233 DATAVD010000000
VERSION     DATAVD010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1977
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2629604"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..918)
                     /locus_tag="VHX39_04350"
     CDS             complement(<1..918)
                     /locus_tag="VHX39_04350"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX3990385.1"
                     /translation="MRPWLWAFILTVVLTSTVAYQLANWASWPSQSPVVADEANPQPL
                     DQKSDRLPPNTAEAQLQQSNAPAVVLKSDELPAAGEQAPPEDVPSTGTIELATPSETK
                     QNLSWLAYYAYSEYPPETKPAETVLDALKGIPPGTPIEEIKRVADILGLNVTFMKAVA
                     KIESGFNPNQRTGSYIGLFQLSENEFQKYGAGNIRDPRDNTVAAALKIMTEAILFETF
                     THKNPTLNDLYLIHQQGVDGAAEHVSHPNRLAWQSMCATFEGQEKGEKWCKRAIWGNT
                     LPAIKRAWKSVDKVTSAAFVAMWQQRVSYF"
     gene            complement(1016..1900)
                     /locus_tag="VHX39_04355"
     CDS             complement(1016..1900)
                     /locus_tag="VHX39_04355"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3990386.1"
                     /translation="MIDSNRRAVLTAGAAAAAATAAPQVFAQTPQAGAPQAAAALPAG
                     AKVGFYEKGNVRIRYAEIGSGFPLLALPGGGLNSRIANWPNAVINIPEVFKNDFRIII
                     MDQRNASNGESTGPVAVDDPWGAFADDQLGVMDHLGIRQFLFFGNCIGGPFGMKLMER
                     APQRVAAALLSQPVGHRPEKPDVMFDLSRDVWGKEFRERRPDVSTETIEKYLHNLYRV
                     QPDFVYSVSRDFAKSCQTPMLVLPDDIPAHPLVVSVAIASLAPNAEIAVFPWKEPSDL
                     KARTIDRARAFLKRHQPA"
BASE COUNT          338 a          599 c          626 g          414 t
ORIGIN      
        1 aaaataggac acgcgctgtt gccacatggc gacaaaggcg gctgaggtga ctttatcgac
       61 gctcttccag gcgcgtttga ttgccggaag tgtatttccc cagatagcgc gcttgcacca
      121 cttttcgccc ttttcctgtc cttcgaaggt ggcgcacatc gattgccatg caagccggtt
      181 ggggtggctc acatgttcgg ccgcgccatc aaccccctgc tgatgaatca ggtacaggtc
      241 attcaaggtt ggattcttgt gggtgaacgt ctcgaacagg atcgcttcag tcatgatctt
      301 caaggcagca gcgacggtgt tgtcgcgcgg atcgcgaatg ttgccggccc catacttttg
      361 gaattcattt tcgctgagtt ggaacaggcc gatgtaagaa ccggtgcgct gattgggatt
      421 gaagccggac tcgatcttgg caaccgcctt catgaaagtg acgttcaatc ccaatatgtc
      481 cgcgacccgc ttgatttctt cgatcggtgt tccaggcggg atgcccttca gagcatcgag
      541 gaccgtctcc gctggtttgg tctcaggggg gtattccgaa taggcgtagt aagcgagcca
      601 cgagagattt tgttttgttt cgcttggggt ggccagctcg atggtgccgg tactgggcac
      661 gtcctccgga ggcgcttgct ccccggcagc gggcaactca tctgatttca agacaacggc
      721 gggcgcgttg ctctgctgca actgcgcctc agctgtattc ggcggtagcc ggtctgattt
      781 ttgatcgagg ggctgcgggt tggcctcatc ggccacgacc ggggactgac ttggccacga
      841 cgcccaattg gcgagttgat aggcaaccgt ggatgtcagg accaccgtga gaatgaaggc
      901 ccacaaccaa ggtcgcattc gcccgttccc caagccccgc gtcggtccga gttccaacgc
      961 gctctctgcg gcgactcaaa tggcatcata gcgcggaggt cacgcctccg ccaactcaag
     1021 ccggctggtg ccgcttcagg aacgcgcgtg cgcggtcgat ggtgcgggcc ttcagatccg
     1081 acggctcttt ccaggggaac accgcgatct cggcgttcgg cgccagcgac gcgatcgcga
     1141 ccgataccac cagcggatgc gccggtatat cgtcgggcag caccagcatc ggcgtctggc
     1201 aggacttcgc gaaatcgcgc gaaacgctgt acacgaagtc gggctgcacg cggtagaggt
     1261 tgtgcagata cttctcgatc gtttccgtcg agacgtcggg ccggcgctcg cggaactcct
     1321 tgccccagac gtcccggctc aggtcaaaca tgacgtccgg tttctccggc cgatgcccga
     1381 ctggctggct cagcagcgcg gcagcgacgc gctgcggcgc gcgctccatc agcttcatcc
     1441 cgaatgggcc gccgatgcag ttgccgaaga ataagaactg gcggatgccg agatggtcca
     1501 tcacgccgag ctggtcgtcg gcgaacgcgc cccacggatc gtcgaccgcc accgggccgg
     1561 tggactcgcc gttgctggcg ttgcgctggt ccatgatgat gatacggaag tcgttcttga
     1621 acacctccgg gatgttgatc acggcgttcg gccagttggc gatccgcgag ttcaagccgc
     1681 cgcccggcag cgccagcagc gggaagcccg agccgatctc ggcgtagcga atgcggacat
     1741 tgcccttctc gtagaatccg accttggcgc ccgccggcag tgcagccgct gcctgcggcg
     1801 ctcccgcctg gggcgtttgg gcgaaaacct gcggcgcggc tgtggccgct gctgccgcgg
     1861 cgccggccgt cagaacggcg cgtcggtttg aatcgatcat cggttccccc cttatgtttc
     1921 gttggcgctg ctcattttag cacggattgt cccggcgtgg tccgggtggt gctgaca
//
LOCUS       DATAVD010000234         2168 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1698715, whole genome shotgun sequence.
ACCESSION   DATAVD010000234 DATAVD010000000
VERSION     DATAVD010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1698715"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1361
                     /locus_tag="VHX39_04360"
     CDS             <1..1361
                     /locus_tag="VHX39_04360"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3990387.1"
                     /translation="IPEKSVAVLPFVNMSSDKEQEYFSDGLSDELIQMLANVPDLRVP
                     GRTSSFYFKGRNETLDTIAKQLKVANVLEGSVRKADGRLRVTADLVRSDNGYRLWSAT
                     YDREAKDIFKVQDEIATAVVTALQAKLLPTGKVAARRTSSTDAYDQYLLALQFRKSAA
                     TVESGRQAAAALRKAIALDPNYAAAYAALATTESFIADRTADPASLKQAHADAEKAIA
                     IAPDEADGYAARGYLRGAFSWDWVGAEADTKKALSLNPADPEVQLTYATLLAELGRLP
                     EAIDMSRMAVAADPLSNSGWALLGRFLISTNDFDGADAALRESLRIYPDNSVPLTHLA
                     TLQLCRGQPTEALKTLGRIDDHQLEFYLVSAVQHSLGHSQESQAALDQTIARYAQVEA
                     YQIAETYAWRGEKDEAFNWLQRAYRQRDAGLGALKFDPLLANLRNDPRFTALLKQINL
                     PP"
     gene            complement(1365..1595)
                     /locus_tag="VHX39_04365"
     CDS             complement(1365..1595)
                     /locus_tag="VHX39_04365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990388.1"
                     /translation="MDEPRAADSKPRLRRTIVLCAIFVTASALGMVLARPVAAQFLHS
                     SPWILPAIAVGMLLILVIVALLVLPRLTMRQP"
     gene            complement(1677..>2168)
                     /locus_tag="VHX39_04370"
     CDS             complement(1677..>2168)
                     /locus_tag="VHX39_04370"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX3990389.1"
                     /translation="GDGLDPNTQYGPVQNATQFKKVNEYIEDARKNGKIIAGGKAHTG
                     RGYFVHPTIVRDIADNTRLVQEEQFGPVLPVLRYTSLDDAIARINNSEYGLGGTVWSS
                     NDKRAYETALRIDSGTVWVNKHLDLPVDVPFGGAKQSGFGAEMGQEGLEEFTQSKIIN
                     QAI"
BASE COUNT          413 a          706 c          658 g          391 t
ORIGIN      
        1 ccatccccga aaaatcggtt gcggtactgc cgttcgtgaa catgagttcg gacaaggagc
       61 aggaatactt ctccgacggc ctgtccgatg agctcatcca gatgctcgcg aacgttccgg
      121 acctgcgggt gccggggcgc acttcctcgt tctatttcaa gggccgcaac gagaccctcg
      181 acacgatcgc caaacagctc aaggtcgcga acgtactcga aggcagcgtg cgtaaggccg
      241 acgggcgctt gcgggtgacg gccgatctgg tgcggtcgga caacggctat cgcctttggt
      301 ccgcgaccta tgatcgtgag gcgaaggata tcttcaaggt ccaggatgag atcgccaccg
      361 ccgtggtcac ggcgctgcag gccaaactgc tgcccaccgg caaggtcgct gcccgacgca
      421 cctcgagcac cgatgcgtac gatcaatatc tgctcgcact gcaattccgc aagagcgctg
      481 caaccgtcga aagtggccga caggccgccg ccgcgttgcg caaggcgatc gcgctcgatc
      541 cgaattatgc ggccgcgtat gccgcactcg cgaccaccga gagtttcatc gcggaccgaa
      601 ccgcagaccc cgcatcgctc aagcaggcac acgcggatgc cgaaaaggcc atcgccatcg
      661 cgccggatga ggcagatggg tacgccgcgc gcggctacct gcggggcgcc ttcagctggg
      721 actgggtcgg cgcggaggcg gacacgaaaa aggccctttc gctcaatccg gccgaccctg
      781 aggtgcaact gacctacgcc acgttgctgg ctgagctcgg tcgcctgccc gaagccatcg
      841 acatgtcgcg aatggccgtc gcggccgatc cgttgtcgaa ttccggttgg gcgttgctgg
      901 gccgttttct gatatcgacc aatgacttcg acggtgccga cgccgcactt cgggagtcac
      961 tgcgcatcta ccctgataat tccgttccct tgacgcatct ggcgacgctg cagctgtgtc
     1021 gggggcagcc cacggaggcc ctgaaaacgc tcggcagaat cgacgatcat caactggagt
     1081 tctatctcgt ttcggcggtt cagcactcgc tggggcactc gcaggaatcg caggcggctc
     1141 tggatcagac gatagcccgc tacgcgcagg tcgaggcata ccagatcgcg gaaacctatg
     1201 cgtggcgcgg cgagaaggac gaagccttca attggctgca gcgggcctac cgacaacgcg
     1261 atgcgggctt gggtgcgctc aaattcgatc cgctattggc caatcttcgc aatgatccgc
     1321 gcttcaccgc gctgctgaaa cagatcaacc tgccgccctg acctctacgg ttgccgcatg
     1381 gtcagcctgg gcagcaccag cagggcgacg atgaccagga tcagcagcat gccgaccgcg
     1441 atcgccggca gtatccacgg cgaggaatgc aggaactgcg ccgcgaccgg acgcgccaga
     1501 accattccca gggcacttgc cgtgacgaaa atagcgcaca ggacaatcgt ccggcgcaac
     1561 cgcggcttcg aatcagcggc cctgggttcg tccatcatcc gctccttgtg aagccgtcac
     1621 cccaaaagca aaaggcggca cccttgcggg caccgccttg gcgttgaaca ccgaaatcag
     1681 atcgcctgat tgatgatctt cgactgggtg aactcctcca gtccttcctg gcccatctcg
     1741 gcgccgaagc ccgactgctt cgcgccaccg aacggcacgt ccaccggcag atccaggtgc
     1801 ttgttcaccc agacggtgcc cgagtcgatg cgcagcgcag tctcgtacgc acgcttgtcg
     1861 ttggacgacc agacggtgcc gcccaagccg tactcgctgt tgttgatgcg ggcgatcgca
     1921 tcgtccaggc tcgtgtagcg cagcaccggc aacaccgggc cgaactgctc ctcctggacc
     1981 agacgggtat tgtcggcgat gtcgcggacg atggtcggat gcacgaagta gccacgaccc
     2041 gtgtgcgcct tgccgccggc aatgatcttg ccgttcttgc gcgcgtcttc gatgtactcg
     2101 ttgaccttct tgaactgcgt ggcgttctgc accggtccgt actgggtgtt cgggtcgagg
     2161 ccatcccc
//
LOCUS       DATAVD010000235         4313 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2069840, whole genome shotgun sequence.
ACCESSION   DATAVD010000235 DATAVD010000000
VERSION     DATAVD010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4313
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2069840"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(150..770)
                     /locus_tag="VHX39_04375"
     CDS             complement(150..770)
                     /locus_tag="VHX39_04375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990390.1"
                     /translation="MSGAKSAPKTEMEMMGITNSYWGVCGFTSTFHAMYELNPGKRPL
                     VIGAGIATKVLAEIKTYLVMLKAGGNFTLLNEIEQFTQTFPAVKGADFKTFKLDTYIA
                     LINASVDKSEAEITGNANYSIGMPPQGVADYVNRMWDYKATVTKGDTGADGIIGVKRD
                     DRKMYDGLCHYMYRTGGKIYSWGNTYNGVTDANPAYQVILTIDVKP"
     gene            complement(966..1643)
                     /gene="pdeM"
                     /locus_tag="VHX39_04380"
     CDS             complement(966..1643)
                     /gene="pdeM"
                     /locus_tag="VHX39_04380"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     endonuclease PdeM"
                     /protein_id="HEX3990391.1"
                     /translation="MTAAPVHLAGERLMLDPLGGLFWPETGLLAVSDLHLEKGSSHAR
                     KGNLLPPWDTHATLDRLGLLLRRWRPRIVVTLGDSFHDPEGAGRLPKGELDRLNAMTE
                     AHRFIWVLGNHDPHPPNGIGGQFVEEFVTHPILFRHEAVPRADAGEVVGHHHPKASIP
                     ARGGHVSRPCFVVDARRLMMPAFGAYTGGLDVRDVAIARLFPRGGRVFLLGRDRLFSF
                     AIGQLSR"
     gene            complement(1640..4105)
                     /locus_tag="VHX39_04385"
     CDS             complement(1640..4105)
                     /locus_tag="VHX39_04385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response DEXH box
                     helicase"
                     /protein_id="HEX3990392.1"
                     /translation="MGTLPEPFQTWFAARGWSPRPHQLAMLDAARNGDSVLLIAPTGG
                     GKTLAGFLPSLVELFEAPRDGLHTLYVSPLKALTTDIARNLMAPVTEMALPVRIETRT
                     GDTPANRRVRQKQAPPHLLLTTPESLAVLIASPDAEGLFGSLSAIVMDEVHALAGTKR
                     GDQLALCVERLVELAPRLRRIGLSATVAHPEAIRAFTGASRIIAVADGAPPALSIMLP
                     EGRLSWGGHMGLEAAPQVMARIRDAAMTIVFVNTRAQAELMFQALWKLNDPMVPIGLH
                     HGSLEIEQRRKVEAAMAAGRLRAVVATSSLDLGIDWGGIDQVIQVGAPKGVSRLLQRV
                     GRANHRMDEASQAILVPANRFEVLECQAAIEGVAEKELDGDPPRPGGLDVLAQHLLGL
                     ACAAPFRPDDVYEEVRRAAPYAGLTRDVFDDVLRFVENGGYALEAYDQWRKLFRDSLG
                     LVHVRSERVALRHRMNIGTIVAAPMIKVRLVGRRGSLGPILGEIEEYFVGLLRPGDTF
                     MFAGRLLRFVRLRDMAIECQEGGDGDPMVPAYEGGRLPLTTNLADRVRDLLRAPATWD
                     AFPAPVHEWLDMQRGVSRLPGRNDLLVETFPRGDRWYLVAYCFEGRNAHQTLGMLLTK
                     RMERAGFAPLGFVATDYVIGIWSVNRPMNVAALFDQDMLGDDLEEWMADSSMLKRTFR
                     NVAVIAGLIDRHHPGQEKTRRQVTVNSDLIYEVLRKHQPDHILLRATRADAASGLIDL
                     NRVAAMLARIKGRVVHMVLSRVSPLAVPILLEIGRENVRAGDTEEAMLAEAEAIIAEA
                     TGERDPPQPRGRRRPVQASLFDA"
BASE COUNT          853 a         1434 c         1233 g          793 t
ORIGIN      
        1 atgcgtcttt ggcattggaa tttctcggct tctccgggcc cgaggtgaaa gagggcgtgg
       61 cctcgcatct ggcaaagcga aagccggagt ttccccccgg gtcggtggtg tagcggcgct
      121 tgaaacgtta ccggttcgca ataccggtat tacggcttga catcgatcgt caggatcacc
      181 tggtacgccg gattggcgtc agttacgccg ttgtaggtat tgccccagct gtaaatcttg
      241 ccgccggttc gatacatata gtgacataga ccatcataca tcttccggtc gtcgcgcttc
      301 acgccgataa tcccatccgc gccggtgtcg cccttggtca ccgtcgcctt atagtcccac
      361 atgcggttga cgtaatcggc gacgccctga ggcggcatac cgatcgaata gttggcattt
      421 ccggtgattt cggcttcgga cttgtccacc gaggcattga tcagcgcaat ataggtatca
      481 agtttgaaag tcttgaagtc cgcgcctttg accgccggga aagtctgggt gaattgctcg
      541 atttcattca acagagtgaa attgccgcct gccttgagca tgaccagata ggttttgatc
      601 tctgccaaca ctttggtggc aatgcccgcc ccgatgacca gtggccgctt gccgggattt
      661 aactcataca tggcatggaa cgtgctggta aaaccgcaga caccccaata actgttggtg
      721 atgcccatca tctccatctc ggtcttcggc gctgacttcg ctccggacat cgatcatctc
      781 ccacattggt ctggaagttg gttacgcgac tgcaatgcgc gcctatgggc gcttttcgcc
      841 gccgtttatg tcacggtcgg aaagccatag acaagagatt ttcacggcac acatctgctg
      901 aaataccctg agctgctgca gtgatttgcc cgcgcacatc cgtttcacgt ttgcaactcg
      961 cccatctacc tcgacaactg accaatggca aaactaaaca accgatcgcg ccccaaaaga
     1021 aacacgcgcc cgccccgcgg gaacaaccgg gctatcgcca cgtcccgcac gtcgagcccg
     1081 ccggtatagg caccgaacgc cggcatcatc aggcgcctgg catcgaccac aaaacacggc
     1141 cggctgacgt gaccgccacg agccggaatt gacgccttcg gatgatgatg gccaaccacc
     1201 tcaccggcat cggcgcgcgg caccgcctcg tgacggaaca ggattggatg ggtaacgaac
     1261 tcttccacga actgcccgcc aatgccgttc ggcgggtgcg gatcgtgatt gccgagcacc
     1321 cagatgaaac ggtgcgcctc ggtcatcgca ttcagccggt ccagttcgcc cttcggcagc
     1381 cgtccggcac cttccggatc gtgaaacgaa tcacccagcg taacaacaat gcgcggccgc
     1441 cagcgccgca acagcagacc aagccggtcc aacgtcgcat gcgtgtccca gggtggcagc
     1501 aaattgcctt tgcgcgcatg cgaagagcct ttttccaaat gcaggtcgga gaccgccaac
     1561 agacccgtct ccggccagaa tagtcctccc agaggatcca acatcaaccg ctcgccggcg
     1621 agatgcaccg gtgcggctgt catgcgtcga acaacgaggc ctgtaccggc cgtctccgtc
     1681 cgcgcggttg tggcggatcg cgttctccgg tcgcctcggc gatgatcgct tcggcttcgg
     1741 ccagcatggc ttcttcggtg tcgcccgcgc ggacattctc tcgcccgatc tccagcagga
     1801 tcggtaccgc gagcggcgag acccgggaca acaccatgtg cacaaccctt cctttgatcc
     1861 gcgccaacat ggccgccacc cggttcagat cgatcagccc cgaggcagcg tccgcccgag
     1921 tcgcccgcag caggatgtga tccggttgat gctttcgcaa cacttcgtaa atcagatcgc
     1981 tattgaccgt gacctgccgg cgggtttttt cctgcccagg atggtggcgg tcaataaggc
     2041 cggctatgac tgcaacgttg cgaaatgtgc gctttaacat cgagctgtcg gccatccact
     2101 cttcaagatc gtcacccagc atgtcctgat cgaacaacgc ggcgacgttc atggggcgat
     2161 tgaccgacca aatgccgatc acatagtcgg tcgcaacaaa cccgagcggc gcgaaccccg
     2221 cgcgctccat acgtttggtc agcagcatgc ccaaggtctg atgcgcgttg cggccctcga
     2281 agcagtacgc gacgagatac caacggtcac cgcgaggaaa cgtttcgacc aacaggtcgt
     2341 tgcgtcccgg caaccgagac acgccacgct gcatgtccag ccattcgtgc accggcgcag
     2401 gaaacgcatc ccacgttgcc ggggcccgca acagatcacg cacccggtct gcgagattgg
     2461 tggtcagcgg caatctgccg ccttcatatg ccggcaccat cgggtcgcca tcgccgcctt
     2521 cctgacattc gattgccatg tctcgcagcc ggacgaatcg cagcagccgg ccggcgaaca
     2581 tgaaggtgtc gccgggccgc agcaggccga cgaaatactc ctcaatttcg ccaaggatcg
     2641 ggccaagcga accgcgcctg ccaaccagcc ggaccttgat catcggcgcc gcaacgatag
     2701 tgccgatatt catgcgatgc cgcagtgcca cgcgttccga ccgcacatgc accaacccca
     2761 gactgtcacg aaacaatttg cgccattggt cgtaagcttc cagcgcatag ccgccgtttt
     2821 cgacaaaccg cagtacgtcg tcgaatacgt cgcgggttag accggcatag ggcgcggcgc
     2881 ggcggacttc ctcgtagaca tcatccgggc ggaacggcgc ggcgcacgcc agcccgagca
     2941 aatgttgcgc cagcacatcc aatccgccag gccgcggcgg atcgccatcg agctctttct
     3001 cggcgacacc ttcgattgcc gcctggcact ccagcacctc gaaccggttg gccggcacca
     3061 ggatggcctg actcgcttcg tccatccggt gattggcgcg gccaacacgt tgcaacaatc
     3121 gggacacccc tttgggcgca ccgacctgga tcacctgatc gatgccgccc cagtcgatgc
     3181 caagatccaa cgatgaggtg gcgaccacgg cgcgcaacct ccccgcggcc atcgccgctt
     3241 cgaccttgcg ccgctgctcg atctccagac tgccgtggtg caaaccgatc ggcaccatcg
     3301 gatcgttcaa cttccatagc gcctggaaca tcagttccgc ctgggcgcgc gtattgacga
     3361 acacgatcgt catggcggcg tcacgaatgc gcgccatcac ctgaggcgct gcctccagcc
     3421 ccatatggcc gccccaggac agccttccct cgggcaacat gatggacaac gccggcggcg
     3481 ctccatcggc caccgcaatg atccgcgatg cgccggtgaa ggcgcggatc gcctccggat
     3541 gagccaccgt tgccgacaac ccgatgcggc gcagccgagg cgccagttca accagccgct
     3601 ccacacacag cgccagttga tcgccgcgtt tggtgccggc cagcgcgtgc acctcgtcca
     3661 tcacgatcgc cgacagcgag ccgaacaatc cctccgcgtc gggcgaggcg atcagcacgg
     3721 ccaaactctc tggcgtggtc agtagcaggt gcggcggcgc ctgcttctgc cggacccggc
     3781 gattggcggg cgtatcgcca gtccgggttt cgatgcgcac cggcaacgcc atctcggtga
     3841 ccggcgccat cagattacgc gcgatgtcgg tggtcagcgc cttcaacgga ctgacataca
     3901 gggtatgcaa tccatcccgc ggcgcttcga aaagctccac caaactgggc aggaacccgg
     3961 cgagcgtctt gccgccaccg gtcggcgcga tcagcaacac gctgtctccg ttgcgtgcgg
     4021 cgtcgagcat cgcaagctgg tgcggccgag ggctccagcc tcgcgcggca aaccaggtct
     4081 gaaagggttc cggtaatgtt cccatcgcgg cggggagtta aaccggggcg ggcgggccgc
     4141 acaagggacc ggcaaccgtc ggggtagggt ggaccgcggg cgcgcattgc cggttactgc
     4201 tgtgggcaaa catggcccaa tgcgcgcgtc actgcgatgc ccgcctcatg cgagacgcgc
     4261 cgcgatgata atccgtgcta aatctgcgag ctgatccagt ctttcaaccg gct
//
LOCUS       DATAVD010000236         1536 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3186521, whole genome shotgun sequence.
ACCESSION   DATAVD010000236 DATAVD010000000
VERSION     DATAVD010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3186521"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..752
                     /locus_tag="VHX39_04390"
     CDS             <1..752
                     /locus_tag="VHX39_04390"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HEX3990393.1"
                     /translation="GFIGGAGIADQWWEDQRKEKRWRDTVLRIEGPSVAALQSVFAQN
                     WLRVSGEILTEPTQFQFSRGENGAPGMVVSSTPAAGSTPARILFQLLISSARKCIYMN
                     TPYFLPDRSARGAIIKAVRDRGVEVKIITPGDNSDQKLTRASSREIYGTLLKHGVKIY
                     EYKPSMIHVKALMVDDCWSVVGSTNFDYRSFDLNDEVNLALLDRDVTRRLAADFENDL
                     ANSREITYDEWRRKFRFRLAQWAFNILERQE"
     gene            749..1480
                     /locus_tag="VHX39_04395"
     CDS             749..1480
                     /locus_tag="VHX39_04395"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX3990394.1"
                     /translation="MNRIRVATYNIHKCRGMDWRVNTSRISKVIREIDADIIAVQEIF
                     GLQAECLAKDLKLAHVFGGVRELEGQEYGNAVFTRLSILEAQPFSLTIGGREPRGCLR
                     VCIAPGPVQFFAVHLGTSFFERRRQAMKLVSEEILEQPRFKGLRIVAGDFNEWTRGLA
                     SQLLSRCLRSADLAAHLNRSRTYPGLLPFLHLDHIYYDPAFHLSEMHLYRTPTALAAS
                     DHLPLLATFTGDHDSSMLRQCPVPS"
BASE COUNT          321 a          454 c          431 g          330 t
ORIGIN      
        1 tcggcttcat cggaggggcg ggaattgcgg atcagtggtg ggaggatcag cgcaaagaaa
       61 agcgctggcg agacacggtt ctgcggatcg aggggccgag cgttgcggcc cttcaatccg
      121 tatttgccca gaattggctg cgagtctccg gcgaaatctt gactgagccc acgcaatttc
      181 aattttcgcg aggcgagaac ggagcgcctg gaatggtggt cagcagtacc cccgctgccg
      241 gttccacgcc agcccgcatc ttgtttcagc tccttatttc ctcggcgcgc aaatgcatct
      301 acatgaatac cccctacttc ttacccgatc gaagtgcccg tggagcaatc atcaaagccg
      361 tccgggatcg gggcgtcgag gttaagatca tcactccggg cgacaattcc gaccagaagt
      421 tgacccgcgc ctccagccgc gagatctatg gcacgctcct caaacatggg gtcaagatct
      481 acgagtacaa accgtccatg atccacgtaa aggccttgat ggtggacgac tgctggtccg
      541 tcgtgggctc gaccaacttc gattaccgct cgttcgacct caacgacgag gtgaatctgg
      601 cattgctcga ccgcgacgta acccgtcggc tcgcggccga tttcgagaat gatctggcga
      661 acagcagaga gatcacctac gacgaatggc gtcgcaagtt tcgcttccga ctggcgcaat
      721 gggcgttcaa catcctggag cgccaggagt gaaccggatc cgtgtcgcaa cctacaatat
      781 ccacaagtgc cgcggcatgg attggagagt caataccagc cgcatttcga aagttattcg
      841 cgagattgat gccgatatca tcgccgtcca ggagattttt ggtctgcagg ccgaatgtct
      901 cgcgaaagat ctgaaacttg cgcacgtgtt cggcggcgtt cgcgaactgg aaggccagga
      961 gtacggaaat gcggtcttta cccgtctgtc catcctcgag gcccagccgt tcagtctcac
     1021 tatcggcgga cgggaacctc gcggctgttt acgcgtctgc attgcaccgg ggccggtcca
     1081 gttcttcgcg gtccacctgg gcacttcatt tttcgaacgg cggcgtcagg ccatgaaact
     1141 ggtgtccgaa gagattctgg aacaaccccg gttcaaagga ttgcgtattg tcgccggaga
     1201 cttcaacgag tggacgcgcg ggcttgcatc ccaactgctg agtcgctgcc tccgaagtgc
     1261 cgaccttgcg gcgcatctaa accgcagccg gacgtacccg ggtctgctgc ccttcttgca
     1321 cttggatcac atctactacg accccgcctt tcatttgagc gaaatgcact tataccgcac
     1381 gccaaccgct ctcgccgcct ccgaccatct gccgcttctt gcaaccttta cgggcgatca
     1441 cgattcgtca atgctgaggc aatgtcctgt tccatcatga aagcgatgga tattgccggt
     1501 tgggaaaaca tgtatcgctc cggtgagcga ggccgc
//
LOCUS       DATAVD010000237         1947 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2442987, whole genome shotgun sequence.
ACCESSION   DATAVD010000237 DATAVD010000000
VERSION     DATAVD010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2442987"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..822
                     /locus_tag="VHX39_04400"
     CDS             <1..822
                     /locus_tag="VHX39_04400"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX3990395.1"
                     /translation="SRGDFSLAYQPVCDTKSLHVVGFEALLRWRHPLLGPIQPDLFIP
                     LAEKSGLIVPLGRWVLETACADAAKWARPAHLNVNLSPLQFRQGDLPQQVAEVLARTG
                     LPASRLGLEVTEGLLLDESELVMKTMRALQAQGIRIVLDDFGTAYANMNYLRRFPFNG
                     LKIDKSFIRGLYADEITLAIVQAILSLAERLNLSVVAEGVETERELNVLRKLNCRFIQ
                     GYLTGRPADNQSANALLRQSWVGDAELDVLEIRDFARPTRAGNLLAALGQSATRS"
     gene            1304..1819
                     /locus_tag="VHX39_04405"
     CDS             1304..1819
                     /locus_tag="VHX39_04405"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3990396.1"
                     /translation="MTCPIARSLERVGEWWSILILRDAFLGATRFEQFQKSLQIAPTS
                     LTRRLNALVEAGMLERHQYSERPPREEYLLTARGRDFRPVLWALLAFGNRHFAPEGPS
                     VVIVDKETGAIADPILVDRNTLRPMTEATFRSAPGPAATEETLQRHGGFAGTSNSGSK
                     TTETRQTGSAR"
BASE COUNT          368 a          600 c          615 g          364 t
ORIGIN      
        1 agccgaggcg atttctcgct ggcgtatcag ccggtgtgcg acaccaaatc actgcatgtc
       61 gtcggcttcg aggcgctgtt gcgctggcgt catccgttgc tcggcccgat ccagccggac
      121 ctgttcatcc cgctggcgga aaaaagtgga ctgattgtcc cgctcggccg atgggtgctg
      181 gagacggcat gcgccgatgc cgcgaaatgg gcgcgtccgg cgcatctcaa tgtcaacctg
      241 tcgccgctgc agtttcgcca gggcgacctg ccgcaacagg ttgccgaggt cctcgcccgc
      301 accgggctgc ccgcctctcg tctgggtctg gaggtgaccg agggcttgct gctggatgaa
      361 tccgaactcg tcatgaagac gatgcgggcc cttcaggcgc agggcatccg gatcgtgctg
      421 gacgatttcg ggactgctta tgccaatatg aactatctgc ggcggtttcc attcaatggc
      481 ctgaagatcg acaaatcgtt cattcgaggc ctgtacgccg acgaaatcac tctggcgatc
      541 gtgcaggcga ttctgtcgct tgccgaacgg ctcaatcttt ccgtggtggc ggagggcgtg
      601 gaaaccgagc gcgaactgaa cgtgcttcgc aagctgaact gccgcttcat ccaggggtat
      661 ttgaccggcc ggccggcaga caaccagtcg gcaaatgcac tgctacggca gtcctgggtg
      721 ggcgatgccg aactcgacgt actggaaatc agggattttg ccagaccgac gcgagcaggc
      781 aacctgctgg ctgcgttggg gcagagcgcc accaggagct gagggcgcgt accacggttt
      841 gtcagtggat caagtacccg atgcggtgat tttcggtcgc ggttccgata ctcgccgtga
      901 gcccataact cgctctgccc cattgaggcg ctaacctggc atagtccaga tcacgcaatg
      961 ccgctggccg accaggttgt ggtagcgccc agattagttg aatcgtaaca cactcaatcg
     1021 tcctccccgg acttgttccg gggatcaatc gcagcacggt gctgatgttg atccccgtga
     1081 caagcgcggg aggacgaacg gggaagcgcg gctcgcggtc cgctggttaa ggctcgagag
     1141 cgacaccgtt ccgcgcccgc cagacgagtt ctgaccgcca ggggcgagcc tgggcgcctc
     1201 aattccccga tcaggcactt gcattatgaa agcgactccc atataagcta ccatcatgat
     1261 agccagatgg tcctgatcca tgcgccacac cagctttgag accatgacgt gccccatcgc
     1321 ccgcagcctg gaacgggtcg gcgagtggtg gagcatcctg atcttgcggg atgccttcct
     1381 cggcgcgacc cgcttcgaac agttccagaa aagcctccag atcgcaccga cctcgctgac
     1441 gcgccggctc aacgcgctgg tcgaggcagg gatgctggag cggcatcaat acagcgaacg
     1501 accgccgcgc gaggaatatt tgctgacggc gcgagggcgc gatttccgtc cggtgctgtg
     1561 ggcgttgctc gcctttggca accgccattt cgcgccggaa gggccaagcg tcgtcatcgt
     1621 cgacaaggaa accggtgcca tcgccgatcc cattctggtg gaccggaaca cgctccggcc
     1681 aatgacggag gcgacgttcc ggtcagcgcc aggccctgct gccaccgagg agaccctcca
     1741 gcgccacggc ggcttcgcgg gcacctccaa tagcggaagc aaaacaaccg agacccgcca
     1801 aaccgggtca gcgaggtagt catgtccagt gcagttatta ccaaggagat cgtggaggat
     1861 ctgccgaagg ttccggtgcg tcaggcccgg aaacgtcagt cgccgaagcg gctggctttg
     1921 gtgggcgcgg cgctcgcggt cctcgct
//
LOCUS       DATAVD010000238         3450 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2629949, whole genome shotgun sequence.
ACCESSION   DATAVD010000238 DATAVD010000000
VERSION     DATAVD010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3450
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2629949"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            361..2088
                     /locus_tag="VHX39_04410"
     CDS             361..2088
                     /locus_tag="VHX39_04410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX3990397.1"
                     /translation="MSATRYPSMAAGWRLPNMWDAAAFVCVIAILTAVGHVAEGTLTR
                     IDAPGATQITLDPWNLPNYAVRTTLRMFAALAASLLFTFTYGTAAAKSRRAALVLVPL
                     LDVLQSVPILGFLTFTVVFFMNLFPGQVLGLELAAIFAIFTSQAWNMAFSLYQSLKTV
                     PSDLAEASISFHLTAWQRFWKLEVPFAAPGLVWNTMMSMSGGWFFVVASEAVSVGNHT
                     WKLPGIGSYVALALEKQDIVAVFWAILAMLVVILLYDQLLFRPLVAWSAKFRFETTAG
                     ATASDPWMLRLMRRTRLLKFVGELVGDTAALIGGMRLSFGIRPRSMMSSEPSRTIDIA
                     WIALLLVLVGLAIWRVVLFASQLLTWHDIAVAVGLGLITLLRVVVLMIIASLIWVPIG
                     VWLGLRPVWARRAQPIAQFLAAFPANLLFPPFVVFIVYFHLSPDVWLTPLMVLGTQWY
                     ILFNVVAGAAAFPGDLKEVAANFRLGGWLWWRKVIIPGIFPYYVTGAITASGGSWNAA
                     IVAEVASWGDTKLQAHGLGAYIADATDRGDMARVVLGVVVMSAFVVLFNRLLWRPMYA
                     FAQRRLTLG"
     gene            2100..3413
                     /locus_tag="VHX39_04415"
     CDS             2100..3413
                     /locus_tag="VHX39_04415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008853755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/sulfonate/bicarbonate ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX3990398.1"
                     /translation="MDTTVDVRPCLVNVTGCRQAYHKDANADLVVLDDVNLTLHEGEI
                     VALLGRSGSGKSTLLRIVSGLLKPTAGSVTWRGTEINGPTDGVAMVFQSFALFPWLTV
                     QENVEIGLEARGVPRARRETLSEAAIDMIGLGGFENAYPKELSGGMRQRVGLARALVV
                     HPDLLLMDEPFSALDVLTAETLRTDLIDLWMEGKLPVKSVLMVTHNIEEAVLMCDRIL
                     VFQSNPGRVANELTVPFPHPRNRLDPDFRQMVDDIYGIMTRRPPAGPKAATTVPVSPL
                     ATPLPRVGTNIMSGLMETLATEPYDGRADLPALAASLQYEVDDLLPLGETLQLMRFAV
                     LEEGDILLTELGRRYVEGDTDERKAIFAEALRQHVPLVNMIRSVLDERWNHRASAVRF
                     RDELEDHMSPDYAEDTLRTVIAWGRYAELFSYDEEAEQFSLEDIE"
BASE COUNT          570 a         1187 c         1060 g          633 t
ORIGIN      
        1 cgaatgcgac tgctgcctta gatcccccat gcggtttatc ctggttcggc ggctcatccc
       61 gcacaaagca cacgttcggt cggaaaagcc tggatcagcg agccaccgga gcgcgacaaa
      121 ggcctttctc tccgcactct gcgccccgct ccgcgcgctt tgcgttgaaa gcggtgccgg
      181 tccaaggcgc cttcgccgac ccagggcaac gaacagtcac ggcccccctc ccccgacaac
      241 acccccaacc cgacaaaccc gatgtcacgg aactgcaacg ccattcgcgc gtgacagccc
      301 ggggtgcgca cgctaacagg gcgcgacgaa cccccaagcc ggaaaacacg gttcaccaac
      361 atgtccgcca cgcgataccc ttcgatggcc gccggctggc gcctgcccaa catgtgggat
      421 gcggcggcct tcgtgtgcgt gatcgccatc ctgaccgcgg tcggccatgt cgccgagggc
      481 acattgaccc gcatcgacgc ccccggcgcc acccagatca cgctcgatcc gtggaacctg
      541 ccgaactacg ccgtccgcac caccctgcgg atgttcgccg ccctggcggc gtcactgctg
      601 ttcaccttca cctacggcac cgccgccgcc aaaagcagac gagccgcgct ggtcctggtg
      661 ccgctgctgg acgtgctgca atcggtgccg atcctgggct ttctcacctt caccgtcgtc
      721 ttcttcatga acctgttccc cggccaggtg ctgggactgg aactggccgc gatcttcgcg
      781 attttcacca gccaggcctg gaacatggca ttcagcctct accagtcgct gaaaaccgtg
      841 ccgagcgacc tcgcggaggc ctcgatcagc ttccatctga ccgcctggca acgcttctgg
      901 aagctggagg tgccgttcgc cgcccccggc ctggtctgga acacgatgat gtcgatgtcc
      961 ggcggctggt tcttcgtcgt ggcgtccgaa gcggtgtcgg tcggcaacca cacctggaag
     1021 ctgcccggca tcggctccta cgtcgcgctg gcgctggaaa agcaggacat cgtcgcggtg
     1081 ttctgggcga tcctggcgat gctggtggtg atcctgctgt acgaccagtt gctgttccgc
     1141 ccgctggtgg cctggtcggc gaagttccgc ttcgagacga ccgccggcgc caccgcctcc
     1201 gacccctgga tgctgcggct gatgcggcgg acccggctgc tgaaattcgt cggcgaactg
     1261 gtcggcgata ccgccgcgct gatcggcggc atgcggcttt ccttcgggat acgcccacgg
     1321 tcaatgatgt cgtcggagcc gtcccgaacg atcgatatcg cctggatcgc gctgctgctg
     1381 gtgctggtgg gactggcgat ctggcgggtg gtgctgttcg cctcgcagtt gctgacctgg
     1441 cacgacatcg ccgtcgccgt cggactgggc ctgatcaccc tgctgcgcgt cgtcgtgctg
     1501 atgatcatcg ccagcctgat ctgggtgccg attggcgtct ggctgggctt gcgcccggtc
     1561 tgggccagac gcgcacagcc gatcgcccag ttcctggcgg ccttcccggc caatctgctg
     1621 ttcccgccat tcgtcgtgtt catcgtctac ttccatctca gtcccgacgt ctggctgacc
     1681 ccgctgatgg tgctcggcac acaatggtat atactgttca atgttgtcgc cggtgcggcg
     1741 gcattcccgg gtgaccttaa ggaagtcgcc gccaatttcc gcctcggcgg ctggctgtgg
     1801 tggcgcaagg tcatcattcc ggggatcttc ccctactacg tcaccggtgc catcaccgca
     1861 tccggcgggt cctggaacgc cgcgatcgtc gcggaggtgg catcctgggg cgacaccaaa
     1921 ttgcaggccc acggattggg cgcctatatc gccgacgcca ccgacagggg cgacatggcc
     1981 cgcgtcgtgc tgggcgtggt ggtgatgtcc gccttcgtcg tcctgttcaa ccgcttgctg
     2041 tggcgcccca tgtatgcctt cgcgcaacgg cgcctaaccc tgggctgagg aataccgtca
     2101 tggataccac ggtcgacgtt cgcccctgcc tggtcaacgt gacaggctgc cgccaagcct
     2161 accacaagga cgccaacgcc gacctcgtgg tgctggacga cgtcaacctg accctgcacg
     2221 aaggcgaaat cgtcgccctc ctcggccgct ccggctccgg caaatcgacg ctgctgcgga
     2281 tcgtctccgg cctgctgaaa ccgaccgccg gcagcgtcac ctggcgcggc accgagatca
     2341 acggcccgac cgacggcgtc gccatggtgt tccagagttt cgcgctattc ccctggctga
     2401 cggtgcagga gaacgtcgag atcggcctcg aagcgcgcgg cgttccccgc gccaggcgcg
     2461 agaccctgtc ggaggccgcg atcgacatga tcggtctcgg cggcttcgaa aacgcctatc
     2521 ccaaggaact ctccggcggc atgcgccagc gcgtcgggtt ggctcgtgcc ttggtcgtcc
     2581 atcccgacct gttgctgatg gatgaaccgt tcagcgcgct ggacgtactg accgccgaga
     2641 cgctgcgcac cgacctgatc gacctctgga tggagggcaa gctgccggtg aagtcggtcc
     2701 tgatggtgac ccacaacatc gaggaagcgg tgctgatgtg cgaccgcatc ctggtgttcc
     2761 agtccaaccc aggccgcgtg gcgaatgaat tgacggtgcc gtttccccac ccgaggaacc
     2821 gcctggaccc ggacttccgg cagatggtgg acgacatcta cggcatcatg acaaggcgcc
     2881 cgccagccgg ccccaaggca gcgacgacag tgccggtctc gcccctggca acgccgctgc
     2941 cccgcgtcgg caccaacatc atgtccggcc tgatggagac cctggcaacg gaaccctacg
     3001 acggccgagc cgacttgccg gccctggccg cgtcgctgca gtacgaggtc gacgacctgc
     3061 tgccactggg cgaaaccctg caattgatgc ggtttgccgt gctggaggaa ggcgatatcc
     3121 tgctgaccga actcgggcgg cgttatgtcg agggcgatac ggatgagcgc aaggcgatct
     3181 tcgccgaggc cctgcgccag cacgtgccgc tggtgaacat gatccgtagc gttctcgacg
     3241 aacgctggaa ccaccgtgcg tccgcggtgc gcttccgcga cgaactggaa gaccacatgt
     3301 cccccgacta cgccgaggac acattgcgca ccgtcatcgc ctggggccgc tacgccgaac
     3361 tgttcagcta tgacgaagaa gccgaacagt tcagtttgga ggatatcgag tagtcgaact
     3421 catccgacaa ggattgttcg tcacccgaag
//
LOCUS       DATAVD010000239         4339 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2813298, whole genome shotgun sequence.
ACCESSION   DATAVD010000239 DATAVD010000000
VERSION     DATAVD010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4339
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2813298"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..839
                     /locus_tag="VHX39_04420"
     CDS             <1..839
                     /locus_tag="VHX39_04420"
                     /inference="COORDINATES: protein motif:HMM:NF025214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyl transferase family 1"
                     /protein_id="HEX3990399.1"
                     /translation="YLGFIGPVPMPELDFLLCDEFVIPPTFAALYQPQPLYVGPNYQA
                     NDRKRVIGEPVSRSTVGLPEDRFVFCCFSNHYKITEAMFGAWMTILRRVPKSVLWLAS
                     DNAWSCDNLCAFASSAGVDPARILFAGRADPAEYMARLSLPDLFLDTFPYNAGTIASD
                     AIRMGLPLVTLSGESFASRMAARLLQAIGATAGIGETVEHYIEIAVACATQPVLFAGY
                     QALFTEANWAATIGDIATFTYHYEESLTQIEHALRTQYPSRIQPIADAMPDLVLAAAP
                     TC"
     gene            846..2825
                     /locus_tag="VHX39_04425"
     CDS             846..2825
                     /locus_tag="VHX39_04425"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990400.1"
                     /translation="MSDLHEPGPGTLIGGQYLVDPTKQIPDAGGGVAAFAVSSARAGS
                     SPLMALRVDRHAPARPRPVYNLTTKVDGLLNPLAHGLGPPIDGQPAWYVICQAPSGPP
                     VSSALRPWTETALIEFVMRPIAAVLEQLQSRGITHRAIRPSNIFQGEPNRPVTLGAAW
                     STPPAMHQPAICETPYAALCHPAARGEGRTADDVYALGVLLITLALGRMPMDGADDRT
                     VMYRKLELGDFVALTGSERMSPMLHDLTRSMLAEDPDHRPTPALLRDPSGARGRRVAA
                     RPASRAQRSFKIGAMTVWNNRTLALAIALDSAEALTSIQSGTLMYWLRRGLGDSGLAV
                     KLEELVRQNAQDVLTDKETALSLLAMRAITDLDNLMPLCWRNLAIFPDGLGPVLAAAL
                     ENEPALLRNLYDIVNCEAQGIWAAMREERAASGPQRLEARQRRAVMQIKGPAGSLPRL
                     AYTLNPLIPCASALLGGRWIANLADLASALDAVATASPDANLLEPRIAAFIGARSERM
                     LDSEVQALGHDGDPADRVLVTLKLLTEIQNRFHPVTMKGITGWIAARCHPLVERWKNR
                     ERREAVNEQLTGLAALGFLQPILTLLQDQAGHAEDLDGLRAARATVGEIDAALHGIVE
                     GTGLRAAFATRVGQEIAAGVGLAAIAITLILAALG"
     gene            2829..3332
                     /locus_tag="VHX39_04430"
     CDS             2829..3332
                     /locus_tag="VHX39_04430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990401.1"
                     /translation="MAAALRPPDTKLGPTRQGNGKIAGGNRSVIWLSGLACGVLAAIA
                     PGIATVAFGLLAPGVVALKLDREPGRPVARAVLTCGLAGCVHPVITLWNTGQSLETAI
                     TIVTDLTTIGTAWGAAAAGWLLSQIAPLVVRVALEAVALARTTRLRAARFRIVEAWGL
                     DEASNDE"
     gene            3514..4116
                     /locus_tag="VHX39_04435"
     CDS             3514..4116
                     /locus_tag="VHX39_04435"
                     /inference="COORDINATES: protein motif:HMM:NF015674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeD family acid-resistance protein"
                     /protein_id="HEX3990402.1"
                     /translation="MADMDPTLSDMQRAVTNAFSAHWKLFLFQGAVMVILGVLAILAP
                     VAASIAIAIYVGWLLLISGVIGLVSIVSTHHVHAFLWSLVTAALSVVIGVLLVLMPVQ
                     GAVTLTIVLTAFFIAEGVFQTTVAIASRHVLHGTWVWMLLSGIADLVLAAIIIEGWPG
                     TAIWALGLLVGINLLTSGWAVVAAALAGRRMAGAAGPAAA"
BASE COUNT          790 a         1331 c         1320 g          898 t
ORIGIN      
        1 cgtatctcgg cttcatcggc ccagtaccga tgccggaact ggacttcctt ctgtgcgatg
       61 agtttgtcat accgcccacg tttgcggcgc tgtatcagcc gcagccgctt tacgtgggtc
      121 caaactatca ggccaacgat cgcaaacggg tgatcggaga acctgtttca cggtcgacgg
      181 tgggtctgcc ggaggatcga ttcgttttct gctgtttctc caatcattac aaaatcaccg
      241 aggcgatgtt tggcgcctgg atgacgatcc ttcgacgcgt gccaaaatcg gtgctgtggc
      301 tggcctccga taatgcctgg tcttgcgaca atttatgcgc gttcgcctcc agcgccggag
      361 tcgatccggc gcgcattttg ttcgccgggc gcgccgatcc agccgagtac atggcccggc
      421 tttcattgcc cgatctgttc ctcgatacct tcccctataa tgccgggacc attgccagcg
      481 acgcgatccg aatgggattg ccattggtca cgctgagcgg tgagtcgttc gcctcccgca
      541 tggctgcccg attgttgcag gcaatcggcg ccacggccgg gattggcgaa acagtcgaac
      601 actacatcga aattgcggtt gcctgtgcca ctcagccagt tctgttcgca ggataccagg
      661 ccttgtttac cgaggccaac tgggctgcga ccatcggcga tatcgccaca tttacttacc
      721 attacgagga gtcactgaca cagatcgaac acgcacttcg aacccagtat ccgtcgcgga
      781 tacagccgat cgctgacgcc atgccggacc tggttctcgc cgcagcgcca acttgctgat
      841 cacaaatgtc tgatcttcat gagccgggac caggtaccct gatcggcggt caatatctgg
      901 tagacccaac caagcagata ccggatgcgg gtggcggggt cgcggcattt gccgtcagca
      961 gtgcgcgtgc cggttcctcc ccgctgatgg cactccgcgt ggaccgccat gcaccggccc
     1021 gcccccggcc cgtctacaac cttacgacca aagtggatgg cctcttgaac cctctggcgc
     1081 atggcctcgg cccaccgatc gatggtcaac ccgcctggta tgtgatttgt caggctccat
     1141 ccgggcctcc ggtttcgagc gcgcttcgtc catggactga aaccgcactg atcgagttcg
     1201 tgatgcgacc gatcgccgca gtgttggagc agctccagtc acgcggcatc acccaccgcg
     1261 cgatccgccc cagcaacata ttccagggcg aaccgaaccg acctgtgaca ctaggcgccg
     1321 cgtggtcaac accgcccgca atgcatcagc ccgcgatctg cgagacccct tacgccgccc
     1381 tttgtcatcc cgcagcgcgc ggcgagggac gtaccgccga cgacgtgtat gcacttggcg
     1441 tgctgctcat aacactggcc ctcggccgga tgcccatgga tggcgccgac gacagaacag
     1501 tcatgtatcg caagctcgaa cttggcgatt tcgtggcact gactggcagt gagcgtatgt
     1561 caccgatgct gcacgacctg acgcgcagca tgcttgccga agaccctgat caccggccaa
     1621 ctccagccct gttgcgagat ccgagcggtg cccgtggccg acgggttgcc gcccgtccgg
     1681 cctcccgcgc gcaacgctca tttaaaattg gcgcgatgac agtctggaac aaccgaacgc
     1741 tggcactcgc gatagcactt gattcggccg aggcgctgac atcgatccag agcggaacgc
     1801 tgatgtattg gctgcgccga ggtctcggtg attccggcct cgccgtgaag ttggaagaac
     1861 tggtccgtca gaacgcgcaa gacgtgttga cggacaagga aacggcgttg tcgctgctcg
     1921 cgatgcgtgc gatcaccgac ctcgataatt taatgccgct gtgttggcgg aatctcgcga
     1981 tattccctga cgggcttggc cccgtactgg cagcggcttt agagaacgag cctgcgctgc
     2041 ttcgcaatct ctacgacatc gtgaattgcg aggcgcaagg catctgggcc gcgatgcggg
     2101 aagaacgcgc agcttccggg ccgcagcgtc ttgaggcgcg gcagcggcgg gctgtgatgc
     2161 agatcaaggg gccagctggt agtctgcccc gcctggcata cacgcttaat ccattaattc
     2221 cgtgtgccag cgcactcctc ggcggacgtt ggatcgctaa tcttgcggac ctcgcgtcgg
     2281 cactggatgc cgtcgccacg gcttcaccgg atgccaatct gctcgagcca cggatcgccg
     2341 cattcattgg agcgcgctca gaacgcatgc tggatagcga ggtgcaggcg ctcgggcacg
     2401 acggtgaccc ggccgatcgc gtgctggtca cgctgaagct gctgactgaa atccaaaacc
     2461 gctttcatcc ggtgacgatg aaaggcatta ccggatggat cgccgcacgc tgccatccct
     2521 tggtcgagcg ttggaagaac cgcgaacgcc gggaggccgt gaacgagcag ctgacgggat
     2581 tggctgcatt gggtttcctg cagccaatcc tgacattgtt gcaggatcag gctggacatg
     2641 ccgaggacct ggacggatta cgcgcggcac gcgccaccgt cggggagatc gatgccgcgt
     2701 tgcacgggat cgtcgaagga accgggttgc gagcggcgtt cgcgacccgc gtcggtcagg
     2761 aaatcgccgc cggggtaggg cttgccgcca tcgcgatcac cctgatcctt gccgctttgg
     2821 gctgaatgat ggccgcggca ttacggccac cggacacgaa gctggggccg acgcggcaag
     2881 gcaatggaaa aatcgccggc ggcaaccgct ccgttatttg gttatcaggc ctggcgtgcg
     2941 gcgtcctggc ggcgattgcg ccggggatcg ctactgtcgc attcggtctg cttgcacctg
     3001 gagtggtcgc actcaaactc gaccgagaac ctgggcgccc ggtcgcgcgt gccgtattga
     3061 cctgtgggct ggccggctgc gtgcacccgg tgatcacact ttggaatacc ggacaatcct
     3121 tggagacagc gatcacaatc gtcactgatc taacgacaat aggcacagcc tggggggctg
     3181 ccgccgccgg ctggctcctg agccagattg ccccattggt cgtacgagtg gcactcgagg
     3241 cggtcgcgct ggccaggaca acccggctgc gcgcggcgcg gtttcggata gtcgaagcct
     3301 ggggtctcga cgaggcgtca aacgacgagt gataccgccc ctggcaggcc aagttccttc
     3361 cttggcgact gacggtcgtc aatccgtcgc gtcccgcggc gatgtgtcgg gtttcgcaaa
     3421 tgatattgat cgaaacctgg atagaaacga tatcacacct ggacgcgccc gtggatacgt
     3481 aacgaccccg gttggcgtgg caggaggaac ccaatggctg acatggatcc gacacttagc
     3541 gatatgcaac gagccgtgac gaatgctttc agcgcccatt ggaagctatt cctgttccaa
     3601 ggcgcggtaa tggtcatact tggcgtgctg gcgatccttg caccggtcgc ggcgtcgatc
     3661 gcgattgcga tttatgttgg ctggttgctg ctgatcagcg gcgtcatcgg cctcgtgtcg
     3721 atcgtctcaa cccaccacgt ccacgcattc ctttggagtc tcgttactgc tgcactttcg
     3781 gtcgtgattg gtgtgctgct cgtgctgatg ccggtacagg gcgcggtaac actgaccatc
     3841 gtgctcaccg cctttttcat cgcagagggg gtgtttcaga ccaccgtagc gatcgcctct
     3901 cgtcacgttc tgcacgggac ctgggtctgg atgctgctga gcgggatcgc cgacctcgtg
     3961 ttggccgcga tcatcattga aggttggcca ggaaccgcga tctgggcgct tggtctgctg
     4021 gtcggaatca atctcctcac gtcagggtgg gctgtggtgg cggcggcact tgccgggcgc
     4081 cggatggctg gcgctgccgg cccggcggcg gcgtaattta ccagcccaca cttctttttc
     4141 acctggcgat ttatcctatc gggtttgtca tttgatcgcc tcgccacaac gcgtgggtga
     4201 ccgaagttct tcgcgcgccc cccaatggcg aggcgatcgc agccgatggg gcgaaaaatt
     4261 ttgctcgcat tagtaaactg attgcctaac tgtctgcagt ccgatactaa ggcttatgct
     4321 taaccaatca atcggcctg
//
LOCUS       DATAVD010000240         1550 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_580400, whole genome shotgun sequence.
ACCESSION   DATAVD010000240 DATAVD010000000
VERSION     DATAVD010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1550
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_580400"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1257)
                     /locus_tag="VHX39_04440"
     CDS             complement(<1..1257)
                     /locus_tag="VHX39_04440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990403.1"
                     /translation="MFVRIGVLWALVLAMALSATAQVNVTQFHNHYTRDGLYVDSHFT
                     TAAAAGLTRDLNFNGTISGSVRAQPLYISGGPGGVPMIIAVTESDNVYALNATNGNVI
                     WHDSVGTGVTSGLQCSDSINPLGITGTPAVDLASRSLFFNAMSSAGGTIKHLIFSLNV
                     DTGATNSGWPVDVGATAAFGGNSFLAVAQTQLSACTVLNGYVCVAYCGCGDAPATYRG
                     WIVGVQISNPANVQAWDVGSRGGGSWGVGGVASDDGTNAFIATGNTYNPGSWTGGEAI
                     IRFQPGPVFSGLTNDYWVPTNWQALDTADLDLASSGPLMLDVPGATPSQLVVALGKDG
                     NGYLINRTNMGGITAPVAQKTLSLANIDQAAATYRTAQGTYFVCNVSTTSSSISSQTQ
                     LLGVRVSAANPPAMSTIWTNSQGGRAS"
BASE COUNT          319 a          474 c          467 g          290 t
ORIGIN      
        1 cgaggcgcgc ccgccctggc tgttcgtcca gatcgttgac atggccggcg gattggcggc
       61 cgatacgcgc acccccagca gctgggtctg gctcgaaatg gatgaggacg tggtgctgac
      121 attgcagacg aagtaggtgc cctgcgcggt ccggtaagtc gccgccgcct ggtcgatgtt
      181 ggccagggaa agggtcttct gggccaccgg cgcggtgatg ccgcccatgt tggtgcggtt
      241 gatgaggtag ccgttaccat ccttgccgag cgccaccacc aactgcgacg gagtcgctcc
      301 cggaacgtcc agcatcagcg ggcccgagct cgccagatca aggtcggctg tgtccagcgc
      361 ctgccagttt gtaggcaccc aataatcatt ggtcaggccg ctgaaaaccg gaccgggttg
      421 aaagcggatg atggcctcgc cgcccgtcca gctcccggga ttataggtat tgcccgtggc
      481 gatgaacgcg ttggtgccgt catcactggc cacgccgccc acaccccagg aaccgccgcc
      541 gcgcgatccc acgtcccaag cctgcacatt cgcagggttg ctgatctgga caccgacgat
      601 ccagccccga taggttgcgg gagcatcacc gcagccgcaa taagccacgc aaacatatcc
      661 gttcaacacc gtgcatgcgc tcagctgggt ttgagccacg gccaggaaag agttgccacc
      721 gaaagcggcg gtcgctccca catccaccgg ccagccgctg ttggtcgcgc cggtgtccac
      781 gttcaacgaa aagatcaggt gcttgatggt gccacccgcc gacgacatgg cgttgaagaa
      841 caaggagcgg gacgcaagat ccacggccgg cgtgccggtg atgccgaggg gattgatgct
      901 gtccgagcat tgcagcccgg aagtcacgcc cgtgccgacg ctgtcatgcc agatgacgtt
      961 gccattggtc gcgttcaacg cgtagacatt gtctgattcc gtcaccgcga tgatcatggg
     1021 cacgccaccg ggtccgccgg agatgtacag cggctgcgcc cggacactgc cggagatggt
     1081 gccgttgaaa ttcaggtcac gcgtcagccc ggcggcggcg gcggtcgtga aatgggaatc
     1141 gacgtaaagc ccgtcgcgcg tgtaatgatt gtggaactgc gtgacgttga cctgcgcggt
     1201 tgcagaaagc gccatcgcca gcactaatgc ccacaagact ccgatacgaa cgaacatttt
     1261 cataatcctt cctgtacggt cctatgaaat gctgctggag actttgcgag gtacacacgc
     1321 cttgttccac ttcccaaaac cagcaagcgg aaccaaggca cgtcgcttcg acacgtcgcg
     1381 gcggccggca ctacatggct aacccaccta gttggctcaa ttaaaccatc actgtccggg
     1441 aagtgcaacg gcaagttgcc cttaagggtg ggttttgcgt atcagaatgc gtatttatgt
     1501 cacttcatgg cgacatttcc gcgaaacatg tagaatataa tatgccaacc
//
LOCUS       DATAVD010000241         3499 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1139199, whole genome shotgun sequence.
ACCESSION   DATAVD010000241 DATAVD010000000
VERSION     DATAVD010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3499
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1139199"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            184..2328
                     /locus_tag="VHX39_04445"
     CDS             184..2328
                     /locus_tag="VHX39_04445"
                     /inference="COORDINATES: protein motif:HMM:NF014026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HEX3990404.1"
                     /translation="MNTSLTPDQRADLVLKEMTLDEKIAMLHGVGMPTDDPVTAENAA
                     SNRGVGYDVGVPRLGIPGIDMSDAAYGVRSSGVNGRYSTALPADEAAAASWDPKAAYE
                     YGALIGRELRAQGFNMTLGGGVDITREPRNGRTFEYLGEDPILAGTLVAKLIEGTQSE
                     HVIGDIKHYAFNDQESGRNSVNITIDRRAARESDLLAFEIGVEHGHPAAVMCSYNRVN
                     GDFACENKWLLTEVLKKDWEFPGFVLSDWGGTHSTERASAAGLDNEEPGRFWFGDKYK
                     AAVEAGTIPTTELDDHVHRILRSMFAAGVIDYPRQRSVIDPFAGFATARKIEEGGIVL
                     LKNNKAVLPIDAGRVHTIAVIGAHSDVGMISGGGSAQVDPIGGNAILPPGKGATRWQE
                     QIWFPTSPLKAIEARAPHASVKYDAGTDPAAAAAAAKGADVAIVFGYQWESEGMDLPS
                     LALPEYKEGEQKVDQNAVIAAVAAANPHTVVVLETGSPVTMPWVEAPAAILETWYSGS
                     DGADALGNILFGSVNPSGKLPNTFPKSEADLPHPTVTQPPPASEFAGASSPEDWAKGR
                     PPFQVAYDEGVKVGYKWYDAEHKPVLFPFGYGLSYTTYGYSGLTVTPGATVQVSFTVA
                     NTGSRAGSEIAEVYAALPASAQEPPKRLIGFTKVQLSPKEKKTVTVDVDPKYLSIFDV
                     DKNGWTLVPGEYTIMVGGSSDKLPLKATVSLK"
     gene            2669..3397
                     /locus_tag="VHX39_04450"
     CDS             2669..3397
                     /locus_tag="VHX39_04450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990405.1"
                     /translation="MFGAALALHGQEPVTVEPSAVPLPKLAQPEVFHSDLLDVTFTYP
                     KSMKAQTLPGLKEQHDAMAAQLKNAGRPEDPTTACSDKALLAERKDEGGKLAAGTGHA
                     VTAKIVMSRMGVSCMPASYQSQIDQVAASMSAALAQDKDLVPIDRPIWYNVGATRIYF
                     AAGETARPNQQAMPGSDGATNARWVGSAAFVWGGNLISVVVESNDLGYFNELLHAKLS
                     LGKAAGAALFPAAIGGGKPIQPTE"
BASE COUNT          675 a          921 c         1305 g          598 t
ORIGIN      
        1 gttgttagta tgggagccgt cccaagataa acgttttagc agagggagaa gtgaatgagg
       61 aaacatgaaa attgccgctc cgggggtgtg gtcccggcgc tggcacttgc cactcttttt
      121 ggcttggcgg catccggggt agcccagcgg ccccatgcag cgcccgcgcc caccggtccg
      181 tggatgaaca ccagcctgac tccggatcag cgcgccgacc tggtgctcaa agagatgacg
      241 ctcgacgaga agattgccat gctgcatgga gtcggcatgc cgaccgatga tccggtgact
      301 gcggagaacg cggcctcgaa ccgcggggtg ggttatgacg tgggcgttcc gcggctgggc
      361 attccgggga tcgacatgag cgatgcggcc tacggggtgc ggtcgagcgg agtgaatggg
      421 cggtattcaa ctgccctgcc ggcggacgaa gcggcggcgg cgagctggga tcccaaggcg
      481 gcgtatgaat acggcgcgct gatcgggcgg gagctgcggg cgcagggatt caacatgacg
      541 ctggggggcg gggtcgatat tacccgtgag ccgcgcaatg ggcgcacgtt tgaatacctg
      601 ggcgaagatc ccattctggc cgggacgctg gtcgcgaagc tcatcgaagg cacgcagtcg
      661 gagcacgtga tcggcgatat caagcattat gcgttcaacg accaggagag cgggcgcaac
      721 tcggtcaaca tcacgatcga caggcgcgcg gcacgggaga gcgacctgct ggcgtttgag
      781 atcggggtag agcacgggca tccggcggcg gtgatgtgtt cgtacaaccg tgtcaatggc
      841 gatttcgcct gcgaaaacaa gtggctgctg acggaagtgc tgaagaagga ctgggagttc
      901 cccggatttg tgttgtcgga ctggggcggg acgcactcga ccgagagggc ctcggcggcg
      961 gggctggata acgaggagcc gggacggttc tggtttggcg acaagtacaa ggcggcggtg
     1021 gaagcgggaa cgattccgac gaccgagctg gacgaccatg tgcatcggat tctgcgctcg
     1081 atgtttgcgg cgggcgtgat cgattatccg cggcagcgca gcgtgatcga tccgtttgcg
     1141 ggatttgcga cggcgcgcaa gatcgaggag ggcgggatcg ttctgctcaa gaacaacaaa
     1201 gctgtactgc cgatcgatgc ggggcgggtg catacgattg cggtgatcgg cgcgcactcc
     1261 gacgtgggca tgatctcggg cgggggttcg gcgcaggtcg atccgatcgg cggcaacgcc
     1321 atcctgcctc cgggcaaggg cgcgacacgc tggcaggaac agatctggtt tccgacatcg
     1381 ccgttgaagg cgatcgaggc gcgggcgcct catgcctcgg tgaagtatga cgcgggcacc
     1441 gatccggcgg ccgcggcagc cgccgccaag ggcgcggatg tggccatcgt gtttggctat
     1501 caatgggaaa gcgagggcat ggacctgccg tcgctggcac tgccggagta caaggaaggc
     1561 gagcagaagg tggaccagaa tgcggtgatc gccgcggtgg cggcggccaa tccgcatacc
     1621 gtggtggtgc tcgaaacggg cagcccggtc acgatgccgt gggtagaagc gccggcggcg
     1681 attctcgaaa cgtggtattc gggcagcgac ggcgccgatg cactgggaaa tatcttgttt
     1741 ggttccgtga acccgagcgg caagctgccc aacacgtttc ccaagagcga agcggacctg
     1801 ccgcatccta cggtgacgca gccaccgccg gcatcggaat tcgccggcgc cagctcgccg
     1861 gaggattggg ccaaggggcg gccgccgttc caggtcgctt acgacgaggg agtgaaggtc
     1921 ggctacaagt ggtatgacgc cgagcataag ccggtgctgt tcccgtttgg gtatgggctg
     1981 tcgtatacga cctatgggta ttcggggctg acggtcaccc cgggggccac ggtgcaggtg
     2041 tcgttcacgg tggcaaacac gggctcgcgg gcggggtcgg agattgccga agtgtacgcg
     2101 gctctgccgg ccagcgcgca ggaaccgccc aagcggctga ttgggttcac caaggtgcag
     2161 ctcagtccga aggagaagaa gacggtcacg gtggacgtcg atcccaagta cctgtcgatc
     2221 tttgacgtgg acaagaatgg atggacgctg gttccgggcg aatacacgat catggtgggg
     2281 ggatcgtcag acaagctgcc gctgaaggcg acggtaagcc tgaagtaaca cacggggcag
     2341 gggcgttggc ggcgcgggag agtcggggtt ctcatccttt ccgcggaaaa agcggaaagg
     2401 atggggcagg tgcggtgtgg ggattgagga tcgagctctc ccacatctgc gacaaaagcg
     2461 tcgcagatat ggggcacccg gcgatatgag gcacctggct gatatggggt acccggcaga
     2521 tgtagggcac ggggatgccc aggtcacgac atgaaatttt gcgcggcacg ggggccgggg
     2581 tttgccggat cgcaaattgg acagattgcg tggcgtatag aatggcgctg ggatagcgat
     2641 gcagcgaacc agatttctct atgcatgcat gttcggcgca gcgctggcgc tgcacggcca
     2701 ggagccggtc acggtggagc cgtcggcagt gccgttgccc aagctggcgc agccggaagt
     2761 gtttcacagt gatcttctgg atgtgacgtt cacgtatccg aagagcatga aggcgcagac
     2821 gcttccgggg ctcaaggagc agcacgacgc gatggccgcg cagttgaaga acgcggggag
     2881 gcctgaggat ccgaccaccg cgtgttcgga caaagccctg ctggcggagc gcaaggacga
     2941 gggcggcaaa ctggcagccg gaacggggca tgcggtgacc gcgaagatcg tgatgtcgcg
     3001 catgggcgta tcgtgcatgc cggcaagcta tcagagccag atcgaccagg tggccgcatc
     3061 gatgtccgcg gcgctggcgc aggataagga cttggtgccg atcgatcggc cgatctggta
     3121 caacgtcggc gctacgcgga tctacttcgc ggccggggag acggcgcggc cgaaccagca
     3181 ggcgatgccg gggtcggatg gggcgacgaa tgcgcgatgg gtggggtcgg cggcgtttgt
     3241 gtggggcgga aacctgattt ctgtcgtggt ggaatccaac gacctgggct atttcaacga
     3301 gctgctgcat gcgaagctga gcctgggaaa agcggcgggc gcggcgctgt ttccggcggc
     3361 gattggcggg ggaaagccga tccagccgac ggagtagatc gtcggatcct tccgttggac
     3421 tgaaccttgt cggccgattc tctgagggaa ccacgcggat gtacggctgg gggttctcct
     3481 ccgctcttcg gaaaaagcg
//
LOCUS       DATAVD010000242         3397 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3373585, whole genome shotgun sequence.
ACCESSION   DATAVD010000242 DATAVD010000000
VERSION     DATAVD010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3397
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3373585"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(122..1387)
                     /locus_tag="VHX39_04455"
     CDS             complement(122..1387)
                     /locus_tag="VHX39_04455"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX3990406.1"
                     /translation="MDALTREPVLAPPIRRTRRRMAALLCVLVTAVIATAIWRWPVAP
                     PVDKAALQREANQVVPVVQAEAMRRDMPVWLDGLGTVQAFQTVTVKTMVDGPLTDVAF
                     TEGQTVHVGDVLARIDPRVYRAALDNAVAKKALDEATLANARLDLARYQKLVVTNYAT
                     QQQADTAKATVAQTEALIRQDQAQIDTVQTQLSYTTITSPLDGKVGMRLMDKGNIVHA
                     ADSTGLVVITQLQPISVVFNLPQQTLTQVAATMAAAGSSGPEVLAYEQGSGTGRGRPL
                     DQGTLTVLDNQIDPTTGTIKLKATFPNKAGTLWPGGFVGIRLRIDTVRNATVVPQAAV
                     QRGPRGSFVYVVDPDSTAHRKDVTIGYEDELGSVVTSGIEPGNHVVVDGASRLTDGAK
                     VSVVAPEREAPTGISRPAAPGTRGTGQSG"
     gene            complement(1471..2952)
                     /locus_tag="VHX39_04460"
     CDS             complement(1471..2952)
                     /locus_tag="VHX39_04460"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HEX3990407.1"
                     /translation="MRTCLGFSLLAQTRCATGHDQAAPDLDIPAAYRASAATQAAAWP
                     AEDWWTGFASPELNDLIEQARKQNFDIQAAIARVRQADAQVRIAGAALLPTLNGTASA
                     DWEHFGLNTGSTSVRRGVGSNASADFRSYSIGLSAAYQVDFWGHNLSHRQSLVASAEF
                     SRFDQRTVALTVVTNVANAWFTALALADRLAVARRNVADSEQTLAVIRGRMQAGTASA
                     LDVANQATLVAGEQTNIPNFRNQLEQALISLGILVGEPPERITVRPGTLTALKLPLVY
                     AGLPSALLERRPDVASAEAQLVASGFDVTTARTAFYPAVNLTGSAGYQAAALNALISP
                     GGFIASLAAGLTAPIFDAGALRGALEQARGRQAELLADYRKAVVQAFTDVDNALTAWR
                     YGSEQEKLQVVAVDTARQAALIARQQMLAGTADVTAVLTAEAAAFTAEDTLVQVRLAR
                     VQALLNLYKALGGGWKRSDAEKFPGLSPGMLEGGVALPVGGNR"
BASE COUNT          593 a         1170 c         1027 g          607 t
ORIGIN      
        1 ggccctcttc cattccccaa ccaatggata gattgcaaag gtccgcgacc tttgctggag
       61 gtccaggagg caaagcctcc tggtgggttt cagggcgaag ccctgacgct tcttcccccg
      121 cttagccact ctgccccgtc ccgcgtgtgc ccggtgcggc ggggcggctg atgccggttg
      181 gcgcctcccg ctccggggca acgaccgaga ccttcgcgcc gtcggtcagt cgcgaggcgc
      241 catcgaccac aacgtgattg ccgggttcga tgccgctggt caccaccgag cccagttcat
      301 cctcgtaacc aatggtgacg tccttgcgat gggccgtgct gtcgggatcg acgacataaa
      361 caaagctacc gcgcggtccg cgctgcaccg cggcctgcgg caccacggtc gcgttgcgca
      421 cggtgtcgat ccgtaacctt ataccaacga aaccacccgg ccacagtgtg ccggccttgt
      481 tcggaaaggt tgccttcagt ttgatcgtac ccgttgtcgg atcgatctga ttgtccagca
      541 ccgtaagcgt tccctggtcg agcggccggc cgcgtcccgt accgctgccc tgctcatacg
      601 ccaggacctc cggcccggat gatccagccg cggccatcgt tgccgccacc tgcgtcagcg
      661 tctgctgcgg tagattgaac accaccgaga tcggctgcaa ctgagtgatc accaccaacc
      721 cggtggaatc cgcggcatgc acgatattgc ccttgtccat cagccgcatg ccgaccttgc
      781 cgtccagcgg cgaggtgatc gtggtatagc tcaattgtgt ctgaaccgta tcgatctgcg
      841 cctggtcctg ccggatcagc gcctcggttt gcgcgaccgt cgccttcgcc gtatccgcct
      901 gctgctgggt cgcgtaattc gtcaccacca gcttctgata gcgcgcgagg tccagccgag
      961 cattggccag cgtcgcctcg tccagcgcct tcttggccac cgcgttgtcc aatgccgccc
     1021 ggtaaacccg agggtcaatg cgcgccagca catcaccgac atggacggtc tggccttcag
     1081 tgaaggcaac gtcggtcaac ggcccatcga ccatggtttt cacggtcacc gtctgaaacg
     1141 cctgcaccgt cccgaggcca tccagccaga ccggcatgtc gcgccgcatc gcctcggcct
     1201 gcacgaccgg gacgacctga ttggcctccc gttgcagagc cgccttgtcg accggcggcg
     1261 cgaccggcca acgccagatc gcagtggcaa tgacggcagt taccaggacg cacagcagcg
     1321 ccgccatccg ccggcgggtg cggcggatgg gcggagcaag caccggctcc cgcgtcaacg
     1381 catccatttg ggctccctgt ttacaaccgg ccagaccggg cggtcatcgg tttattcccg
     1441 ctgaactgga ggactggtta attcgggcga tcatcggttg ccgccaaccg gcaatgcgac
     1501 gcctccttct aacatacctg gcgacaggcc tggaaatttc tccgcatccg agcgtttcca
     1561 gccgccaccg agcgccttgt acaaattcaa cagcgcctgc acccgagcca gcctgacctg
     1621 gaccagggtg tcctctgcgg tgaacgccgc cgcctctgcc gtcagcacag ccgtgacatc
     1681 ggcggtcccc gccaacatct gctgccgcgc gattaacgcc gcctgacgcg ccgtatcgac
     1741 cgcaacaacc tgcaacttct cctgttcgga cccgtagcgc catgcggtca gcgcattgtc
     1801 cacgtcagtg aatgcctgca ccacggcctt gcggtagtcg gccagcaact cggcctgacg
     1861 acctctcgcc tgctccagcg ccccccgtaa cgcgccggca tcaaagattg gcgcggtcag
     1921 gcccgccgcc agtgatgcga taaatcctcc tgggctgatc agcgcattca gcgccgccgc
     1981 ctgatagccg gccgaaccgg tcaaattgac cgccggatag aatgccgtgc gcgcggtggt
     2041 gacgtcgaag ccggatgcca ccaactgcgc ctcggccgag gcgacgtcgg gccgccgttc
     2101 caacagcgcc gatggcaggc cggcgtaaac caacggcaac ttcaacgcgg tcagcgttcc
     2161 tggccgcacc gtgatccgct ccggcggctc gcccaccagg atgcccaggc tgatgagggc
     2221 ctgctcgagc tggttccgga agttgggaat gttggtctgt tcgccggcga ccagcgttgc
     2281 ctgattggcg acatcgaggg cactggcagt gcccgcctgc atgcgccccc tgatcaccgc
     2341 gagcgtctgt tcgctgtcgg cgacgttacg cctggccacc gccagccggt cggccagcgc
     2401 cagcgcagtg aaccaggcgt tggcgacatt cgtgaccacc gtaagagcga cggttcgctg
     2461 gtcgaaccgg ctgaattccg ccgatgcgac cagggattgt cgatgcgaca ggttatgccc
     2521 ccagaaatcc acctgatacg ccgcactcag gccaatggaa tagctgcgga agtcggcact
     2581 ggcattgctg cccaccccgc gccggaccga agtgctgccg gtgttgagcc cgaaatgttc
     2641 ccaatccgcg gaagccgtgc cgttcagtgt cggcagcaaa gcggcacccg cgatacgcac
     2701 ctgagcatcg gcctgacgga cccgggcaat agctgcctgg atgtcgaaat tctgtttgcg
     2761 cgcctgctcg atcagatcgt tcagttccgg cgaggcgaag ccggtccacc agtcctcggc
     2821 tggccatgcg gcagcttgcg ttgccgcact ggcgcgatac gcggcgggaa tgtcgaggtc
     2881 cggcgccgcc tggtcatgcc cggtcgcgca acgcgtctga gccagaagcg agaaacccag
     2941 gcaggttctc acaaccgctc gtcgcgacca ggctgatctc aggcgtccca cggtaagctt
     3001 caatcgcctc atcattggca gcgagggaat gagccaccgg tcgcctgttc cccgcgttga
     3061 ccgagcgccg gtcaacgcgg gcaagaagac ggagtcagcc gcaacgcgcc gacatctctt
     3121 accacgggaa caccgtgccg gttcaggtgg gtggcttcac aatcaaagta tttccgtggc
     3181 gtgaggcgca gtttctgccg cttgcgcctg gattgccgtt gtgcgacacg ccgcgcgcac
     3241 attgcgccaa tatgacaagg agacggccgg gggtgagcga caccatcctg gagaccgacg
     3301 ggctgactcg cgagttcggc ggcttcctag ccgtcgacgg cgttaatttg cgcgtgaaaa
     3361 ccgggcaaat ccatgccctg atcgggccga atggcgc
//
LOCUS       DATAVD010000243         2229 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_395566, whole genome shotgun sequence.
ACCESSION   DATAVD010000243 DATAVD010000000
VERSION     DATAVD010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_395566"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(83..1189)
                     /locus_tag="VHX39_04465"
     CDS             complement(83..1189)
                     /locus_tag="VHX39_04465"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3990408.1"
                     /translation="MSELGNEPRTRRFALRAGLAAAALPVAGLFAGGAGAATRPVTKV
                     LDFTTCADVAKAEQEGTLLFYTHDGEAGAAAAMDAFNKDFPKIKASYVRLQTGALYSR
                     ILAERSAGRFDVDAIQFSDIGTAIDFQKRGGFDLYHSPESSAYDPVYLGPPPGYFFCS
                     GMTFAGIAYNTDRVKAEDAPKAWKDLLDPRWANVTSTKQSTSGMQFVEWYELRKLYGD
                     SYWKSFTKQRPHGFDSRAQLFDRLAKGDDKICALAEWAGYVLYHERKAPIAFVAPADG
                     LPATALATGVVEKAPHPEAARLFIDWLMSLRGQQVYQQSPDLLYGSVRKDAPPMPGGL
                     RLRDFKLLVPTDVQDLLASRKAFNTEWNNMLGLL"
     gene            1363..2196
                     /locus_tag="VHX39_04470"
     CDS             1363..2196
                     /locus_tag="VHX39_04470"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3990409.1"
                     /translation="MDIRRLTDHAGAEAVGIDLTQTVSEETKTELNRAFVEYSVLVVR
                     DQSLNPDQVLAAVKLFGSIFHQHNTRFALPECPQIHYISNQDRFPDGRRYIPGEGWHT
                     DHSNDSRPPKATVLHAVTLPDRGGDTQFANMAAAYAALPAATKDRIAELIAIHVYQNS
                     HSTRKLMGLSEANKERVPNAVLHPIVRTHPENGRKSIYLNPIRIEGIVGLDHKEALPL
                     LDELLEHAVQERFQYRHAWRPGDLVMWDNRCLLHKANGDYDMAQTRYLYRVMLQGDVP
                     R"
BASE COUNT          421 a          675 c          732 g          401 t
ORIGIN      
        1 ccgatcatcg cgatcccgac agtcgtctgg acagacggca aacgtgccgc ctgccttgtg
       61 gtcgtggtgg cggacatgtg ggctacagca gcccgagcat gttgttccat tcggtgttga
      121 aggctttgcg gctggcgagg aggtcctgga cgtcggtggg aaccagcagt ttgaaatcgc
      181 gcagccgcag gccgcccggc atcggcggcg catccttgcg gacggacccg tacagcaggt
      241 cggggctttg ctggtagacc tgctggccgc gtagcgacat cagccagtcg atgaacaggc
      301 gggcggcttc ggggtggggt gccttctcaa ccacaccggt ggccagcgcg gtcgcgggaa
      361 ggccatcggc gggcgcgacg aatgcgatcg gtgccttgcg ctcgtgatac aggacgtatc
      421 cggcccactc ggccagcgcg caaatcttgt cgtcgccctt ggccaaccgg tcgaacaact
      481 gagcccgcga atcgaagccg tgcggccgct gcttcgtaaa ggatttccag tagctgtcgc
      541 catagagctt gcgcagttcg taccactcaa cgaactgcat gccagaggtc gactgtttcg
      601 tgctggtgac attggcccag cgcgggtcca gcaggtcttt ccatgctttc ggtgcgtctt
      661 cggccttcac ccggtctgtg ttgtaggcga tgccggcgaa ggtcatgccg ctgcagaaga
      721 aatagccggg cggcggaccg agatacaccg ggtcataggc cgaggattcg ggggaatgat
      781 agaggtcaaa gccaccacgc ttctgaaagt cgatcgcggt cccgatatcg gagaactgta
      841 tcgcatccac gtcgaaccgg ccggccgaac gttccgccag gatcctgctg tacagcgcgc
      901 cggtctgcag acggacatag ctggccttga tctttggaaa atccttgttg aaggcatcca
      961 tcgccgccgc ggcgccggct tccccatcat gggtgtaaaa cagcagcgtc ccttcctgct
     1021 cggccttggc gacgtcggcg caggtggtaa aatccagcac cttcgtcacc ggccgggtcg
     1081 ccgccccggc cccgccggcg aaaagtccgg caaccggcag cgctgccgcc gccaggccag
     1141 cccgcaacgc aaaccgccgc gtcctcggtt catttccaag ctcggacatt ggtttcctcg
     1201 tcgattgttg tcgtgtctcg aatgccggtt gcatccctga cacgaagttt ggaattcggc
     1261 catagggaat aaaaggccgg ttgtccgcgt tcgtttggtc cggcgaccgt gacgcggccg
     1321 ggtgacgggg ctaggctggg ggaaagcggg agggttatgg caatggacat cagacgtttg
     1381 accgatcacg ccggcgcgga agcggtcggg atcgacctga cccagacggt ttcagaagaa
     1441 accaaaaccg agctcaaccg ggcgttcgtc gaatacagtg tgctggtggt gcgggaccag
     1501 tcgctgaacc cggaccaggt gctggcggcg gtgaagctgt tcgggtcgat tttccaccag
     1561 cacaacacgc gcttcgcgct gccggagtgc ccgcaaattc attacatctc caaccaggac
     1621 cgctttccgg acggcaggcg ctatatcccc ggtgaggggt ggcataccga tcactccaac
     1681 gactcgcggc caccgaaggc gacggtgctg catgcggtga cgctgcccga ccgcggcggc
     1741 gacacgcagt tcgccaacat ggcggcggcg tacgcagcgc tgccggcggc gacaaaggac
     1801 cggatcgcgg agctgatagc catccacgtc tatcagaaca gccacagcac gcggaagctg
     1861 atggggctgt cggaggcgaa caaggaacgc gtccccaacg ccgtgctgca tccgatcgtt
     1921 cgcacccatc cggagaacgg ccgcaagtcg atctacctca acccgatccg gatcgagggc
     1981 atcgtcgggc tggatcacaa ggaagcattg ccgctgctgg acgaattgct ggaacacgcc
     2041 gtgcaggaga ggtttcagta ccggcacgca tggcggccgg gtgaccttgt gatgtgggac
     2101 aatcgctgcc tgttgcataa ggcgaacggc gattatgaca tggcgcagac acggtatctg
     2161 tatcgcgtga tgctgcaggg cgacgttccg cggtaggcga ctgagtcgcc tgccgcggaa
     2221 cggtcaggc
//
LOCUS       DATAVD010000244         2630 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2255938, whole genome shotgun sequence.
ACCESSION   DATAVD010000244 DATAVD010000000
VERSION     DATAVD010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2630
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2255938"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(222..1118)
                     /locus_tag="VHX39_04475"
     CDS             complement(222..1118)
                     /locus_tag="VHX39_04475"
                     /inference="COORDINATES: protein motif:HMM:NF012874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HEX3990410.1"
                     /translation="MTTSVLTNTGAMIALQNLEMVNNQLNKAQNQVSSGLAVSSAADN
                     AATWVVSTTMNANIASLQEVSTGLGNAGSILGTAVSGATEIASLVAQIRAAVTSTQDP
                     ATDIAATQAQVDQLVGQINAAVNSSNFNGVNMLDGSNATGITFLASTANNYTVAGAAS
                     TTIATGNGADLTMSATSTDATMQALFNLVDSGGSGGGLAAITGTTIAAALATVDTANT
                     TVESTAAQFGAVDSNVQSQQTFVNNLVTTLQAGVGNMVDANMTQESAKLSALQVQQQL
                     GTQALSIANQAPQILIKLFANL"
     gene            complement(1267..1662)
                     /locus_tag="VHX39_04480"
     CDS             complement(1267..1662)
                     /locus_tag="VHX39_04480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990411.1"
                     /translation="MSAPSLTKAARQMAKSLQKETDCARMGSLGDLAEAVEAKRFAFQ
                     EFTVACAARGRTPPTTAAERVELRRLLAHADENALILEAVSVTLQDLAGKVRSAASEL
                     ADPGTYTVGGRSPRRSFRHVLAACVNASV"
     gene            complement(1659..1892)
                     /locus_tag="VHX39_04485"
     CDS             complement(1659..1892)
                     /locus_tag="VHX39_04485"
                     /inference="COORDINATES: protein motif:HMM:NF021638.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod-binding protein"
                     /protein_id="HEX3990412.1"
                     /translation="MHQVAKQFEAMFMTEMLHQAHSKSHAVGMFRTGEGESTMQPFMD
                     QALGDAVAARGGTGITQSIERLLNGPQIASKGK"
     gene            2217..>2630
                     /locus_tag="VHX39_04490"
     CDS             2217..>2630
                     /locus_tag="VHX39_04490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEX3990413.1"
                     /translation="MRDDRRGAEQPDPNSGKALQFAEGGQEAPRFSIMQVTPETAPSL
                     LALKRPGVRRNQSAVAAYAQAMQSGEWVLNGMPLIVSRKGVLLDGVQRLYACIEAAVP
                     FVTVLAENVSDDTVHTIDQQRRRSFSGVLETRGIRH"
BASE COUNT          467 a          769 c          846 g          548 t
ORIGIN      
        1 atgcggagtt cgatctcgcg tggccgctcg gtgtcgcgaa tgaccttgcc gtagatcgaa
       61 ccggcgccgg cggggccccc gccaaggggt gctgccagtg acaggtcggc aattggatat
      121 tccataagac gcgccttctt catcgtcgcg ttggccggca tcccccggcg tattctgcgc
      181 cgaggtggag gggccggcct gcgcggccgg cccgccgtca atcacaggtt ggcgaacagc
      241 ttgatcagga tctgcggcgc ctggttggcg atcgacagcg cctgtgtgcc aagctgttgc
      301 tgcacctgca acgcactgag tttggcggac tcttgcgtca tgttcgcgtc caccatgttg
      361 cccacaccgg cctgcagcgt ggtcaccagg ttgttgacga aggtctgctg tgactgaacg
      421 ttcgagtcca cggcgccgaa ttgcgcggcc gtgctttcga cggtggtgtt ggcagtgtcg
      481 accgtcgcca aggccgcagc gatggtcgtg cctgtgattg ccgccagccc gccaccgctg
      541 ccgccgctgt cgaccagatt aaacaacgcc tgcatggtcg cgtcggtgct cgtggcagac
      601 atcgtgaggt cggcaccgtt gccggtcgcg atggtggtcg aggccgcacc ggccacggtg
      661 tagttgttgg cagtggaggc caggaaggta atgccggtgg cattggagcc atcgagcata
      721 ttgaccccgt tgaagttgga actgttcacc gctgcgttga tctggccgac caattggtca
      781 acctgggcct gagtcgcagc gatgtctgtc gccgggtctt gcgttgatgt gacggcggcc
      841 cggatctgcg cgacgaggct ggcgatttcg gtcgctcccg acacagcagt gccaaggatc
      901 gaaccggcat tgcccaggcc ggtgctgacc tcctggagcg acgcgatgtt cgcgttcatg
      961 gtggtcgaaa cgacccaggt ggcggcgttg tccgcagcag aactgaccgc aaggccgctg
     1021 gagacctgat tttgcgcttt gttcagctgg ttgttcacca tctccaggtt ctggagggcg
     1081 atcatggcac cggtattggt gagaacagag gtggtcattg gttagctccc attcagggtg
     1141 gtttcgggag cgcctttctg acgcaggtgc cacacccctc gatgggggca atctttggcg
     1201 acatcgtggt atttagcgaa aatctgccag tgatgcaaga gaattattac cggatttcgc
     1261 ggacgctcaa acgcttgcgt taacgcaggc tgccagcacg tgacggaacg agcgcctggg
     1321 tgagcgtccc cctaccgtgt acgtaccggg atcggcgagt tcggaagcgg cgctgcgcac
     1381 tttcccggcc agatcttgca gcgtcacact aactgcctca agaataaggg cattttcgtc
     1441 agcgtgagcc agcagccggc gcagttcgac gcgctccgct gcagtcgtgg gcggggtccg
     1501 gccacgcgcc gcgcaggcca cagtgaactc ctgaaatgca aacctcttgg cctcgacagc
     1561 ttcagcaagg tcgccgagag aacccattcg ggcacagtct gtctcttttt gcagggattt
     1621 ggccatctgg cgtgcggcct tggtcagcga gggtgcgctc atttgccctt actcgcgatt
     1681 tgggggccat taagcagtcg ttcaatcgat tgagtgatac cggttccgcc gcgcgctgcg
     1741 actgcgtcac cgagtgcctg gtccatgaac ggttgcatgg tgctctcacc ttcgccagtg
     1801 cgaaacatgc caacggcatg cgatttgcta tgggcctggt gaagcatttc ggtcataaac
     1861 atggcttcga attgctttgc gacctgatgc actttggctc gtccgaccgt cctcgacacc
     1921 ggggcggccg tggcggcctg cgtaatagcg agggtttctg ttggtcccat gtcttggcta
     1981 tagtgatcgc atacttgcag catccctaca tatctgtgcg aaaatttacc acctggtgcc
     2041 gggaaaagat gctatgcagt accgccgccg gtccggagta ggaggcgatg tccttgaaac
     2101 ctgacacgcg caggttaatg acgccgcggg cacgcgagtc gtggggaaaa accccgcctg
     2161 acagcaaggc acgcacgggg attgaatacc cgagccagcc aaggaatgag ggtccaatgc
     2221 gggatgaccg ccgcggcgcc gaacaacccg acccaaactc gggcaaagct ctccagttcg
     2281 ccgaaggcgg ccaggaagcg ccgcgttttt ccatcatgca ggtaacgccg gagacggcgc
     2341 catctctgct ggccttgaaa cgaccgggcg tcaggcgaaa tcagtcggcc gttgcggctt
     2401 acgcccaggc gatgcaaagc ggcgaatggg tactcaacgg gatgccgttg attgtctccc
     2461 gcaagggcgt cttgctggat ggtgtgcagc ggctgtatgc ctgcatcgag gctgcggttc
     2521 cgtttgtcac cgtgctggcc gagaatgttt cggacgatac tgtccacacc atcgatcagc
     2581 agcgccgtcg gtcattctcg ggcgtgctgg aaacccgcgg catccggcac
//
LOCUS       DATAVD010000245         2370 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_769126, whole genome shotgun sequence.
ACCESSION   DATAVD010000245 DATAVD010000000
VERSION     DATAVD010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2370
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_769126"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1149)
                     /locus_tag="VHX39_04495"
     CDS             complement(<1..1149)
                     /locus_tag="VHX39_04495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007284381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEX3990414.1"
                     /translation="MTSTATPIKHLVVIFNENVSFDHYFATYPNATNPAGEPAFTALP
                     GTPQVNNLAKAKLLTRNPNLTNKANGADAAEPFRLDRTQAATADQNHAYTAEQQAYHA
                     GKADLFPRFTGKATAGGVGAFGTKGQVMGYYDGNTVAAMWYYAQHFAMSDNAYTDTYG
                     PSTPGLLNLVAGQTNGMQIVAASKNPSTLAAVSYYIGDGAAGLTMINDVDPGHDVCSV
                     PKDQAMMAGKNVGDLLNAARVTWGGFMAGFNLETKNANGTSGCKRSTHSTVVGTDVVD
                     YIAHHNWFQYFASTANPSHARPSSMQAIGNTFEADAKTRDPANHQYGLKDFYDTVKAG
                     NFPAVSFVKLPAYQDGHAGYSDPLDEQAGTATLINFLQQQACWKDTAVI"
     gene            complement(1386..>2370)
                     /locus_tag="VHX39_04500"
     CDS             complement(1386..>2370)
                     /locus_tag="VHX39_04500"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3990415.1"
                     /translation="ARSLLSLEVYIGVAATALLIALNLLLVREIRRRNQRELELTQEH
                     TALENARAALLAEQGKLANVNLELVLSTERAEAANLAKSQFLAQMSHELRTPLHAVIG
                     FSELISHNVAPMPSAGMIAGYADDIMKSGRHLLELINSILDLSKVESGNASLVEQDVS
                     LRDVIIDSLVTVREQAVEAGVAVDTSLPDDLPVVHGDATKLRQIFINLLSNAVKFTQR
                     DGTVTVSGRREPDNGFAVLFADTGIGMTDPELGIAMEPFGQVENSFSRSFEGTGLGLP
                     LARRMTELHGGRLTVRSVKGVGTTVEVYLPPGRVLWSDTALNPQPIPVASD"
BASE COUNT          412 a          694 c          788 g          476 t
ORIGIN      
        1 gatcacggcg gtgtccttcc agcacgcctg ttgctgcagg aagttgatca gcgttgcggt
       61 tccggcctgt tcgtccaaag ggtcggaata gcccgcatgg ccgtcctggt aggcgggtaa
      121 tttgacaaac gatacggcag ggaaattgcc ggccttcaca gtgtcgtaga agtccttcag
      181 gccgtactgg tggttcgccg gatcgcgcgt tttggcatcg gcctcgaacg tattgccaat
      241 cgcctgcatg gaactcgggc gggcatggct ggggttggcg gtcgatgcga aatactggaa
      301 ccagttgtgg tgcgcgatgt agtcgacgac gtcggtgccc accaccgtcg aatgcgtgct
      361 gcgcttgcac ccggaggtgc cgttggcatt cttggtctcc aggttgaagc cggccatgaa
      421 gccgccccag gtcacgcgcg cggcgttcag cagatcgccg acgttcttgc ccgccatcat
      481 cgcctggtct ttcgggaccg agcaaacgtc gtggccggga tcgacgtcat tgatcatggt
      541 cagtcccgct gcaccgtcgc cgatgtaata cgagacagcc gcgagcgtgg acgggttctt
      601 gctggcagcg acgatctgca tgccgttggt ctgcccggcg accagattca gcaagcctgg
      661 cgttgagggt ccgtaggtgt ctgtataggc gttgtcgctc atcgcgaaat gttgggcgta
      721 gtaccacatc gccgcgaccg tgttgccatc gtaatagccc atgacctggc ccttggtgcc
      781 gaaggcgccg acgccaccgg cggtcgcctt accggtgaac cggggaaaca gatcagcctt
      841 gccggcgtga taggcctgct gctcggctgt ataggcatgg ttctggtcgg cggtggcagc
      901 ctgcgttcga tccagccgga acggctcggc ggcatcagcg ccattcgcct tgttggtaag
      961 gttcggattg cgggtcagca acttcgcctt cgccaaattg ttcacctgcg gggtaccggg
     1021 tagcgcggtg aacgccggct cgcccgccgg gttggtggcg ttggggtagg tcgcgaaata
     1081 gtggtcgaat gaaacgttct cgttgaaaat gacgaccaga tgtttgatcg gcgtcgcagt
     1141 ggacgtcatg tcctgaggca ctgcgccgga aggagcgacg gccccctcgg cggcgaggct
     1201 ggggccggcg cgtaaggcga cggaaacagt gagggtaccg gcgacagcgg cgagcagaat
     1261 cctgcgcata ttcattgtgg ttccgtagcg tgatcagttg tttcggcgcc aaacgatacg
     1321 gtagctgccg gcgtttgttt gtgactgatt tatgacgtcg aaccaggtgg tggcgacggg
     1381 ccgcgtcagt ccgatgcaac aggtatcggc tgcgggttca gcgctgtgtc ggaccacagg
     1441 acgcggcctg gcggcaagta cacctcgacc gtcgtgccga cacccttgac gctgcgcacc
     1501 gtcaggcggc cgccatgcag ctcggtcatg cggcgagcga gcggtaggcc cagaccggtc
     1561 ccttcgaacg agcgggagaa cgaattctcg acctgaccga acggctccat cgcaatgccg
     1621 agttccggat cggtcatgcc gatcccggtg tcggcgaaca ggacggcgaa cccattgtcg
     1681 ggctcgcgcc gccccgatac cgtgaccgtg ccgtcgcgtt gcgtgaactt cactgcgttg
     1741 gacagcagat tgatgaaaat ctgccgcagc ttggtggcat cgccgtgcac caccggcagg
     1801 tcgtccggca ggctggtgtc gacggcaacg ccggcctcga cggcttgttc gcggaccgtc
     1861 acgaggctgt cgatgatgac atcccgcaac gacacatcct gttcgacgag gctggcattc
     1921 cccgactcga ccttcgacaa atcaaggatc gagttgatca gttccagcag gtggcggccc
     1981 gatttcatga tgtcgtcggc atagccggcg atcatcccgg ccgacggcat cggcgccacg
     2041 ttgtgcgaga tcagttcgga aaacccgatc acggcatgca agggggtccg cagttcgtgg
     2101 ctcatttgtg ccaggaactg ggactttgcg agattggcgg cctcggctcg ctcggtgctg
     2161 agcacaagtt caagattgac attggccaac ttgccttgct cggccagcaa cgccgcgcgg
     2221 gcgttctcca gcgcggtatg ctcctgcgtg agttcgagtt cccgctgatt gcgccggcgg
     2281 atttcgcgca ccagcagcag gttcagggcg atcagcaggg cggtcgcggc aacgccgata
     2341 tagacttcga ggctcaacag gctacgcgct
//
LOCUS       DATAVD010000246         1725 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1139566, whole genome shotgun sequence.
ACCESSION   DATAVD010000246 DATAVD010000000
VERSION     DATAVD010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1139566"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..413)
                     /gene="nadE"
                     /locus_tag="VHX39_04505"
     CDS             complement(<1..413)
                     /gene="nadE"
                     /locus_tag="VHX39_04505"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF014586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HEX3990416.1"
                     /translation="MIVDTVTGEGDQHATFPGDCEAVYEALVLGTRDYIRKCGFGSVL
                     IGLSGGIDSSLTAAIAVDAVGRENVRGVAMPGPFSSDHSVNDARALAERLRIRFDIVP
                     ISPAYHQMLGTLAPVFEGREPDVTEENIQARLRGLT"
     gene            375..1178
                     /locus_tag="VHX39_04510"
     CDS             375..1178
                     /locus_tag="VHX39_04510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990417.1"
                     /translation="MLIALAGYGIDNHQVFDERRCRGDNVSLGIHGETGSIENDLIVT
                     THLIDHDRRHFMAAHDSAKHFRAQFPLAQMEGRGVYTDEHIRPGLHQLIDGVAPIKPV
                     RPELLVVPGVFTDGERDVISAHFPDQLRIGGDEISHFIEHVISGKEDLGLPHRDLAAP
                     NDRRRVGCLFPGLFARSTDIPGDERQRQIRRRGRELVDRRFRPLNETWLFDQVARRVA
                     GYGQLGKDNQFGISRRRVTGETDHEPDIAGKVADGRIYLPESDPHLHLS"
     gene            complement(1411..>1725)
                     /locus_tag="VHX39_04515"
     CDS             complement(1411..>1725)
                     /locus_tag="VHX39_04515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990418.1"
                     /translation="QTDAYTMPIEDPGIAWNEADSPFLKVAALTIPAQIFDSAERVEF
                     GDNLSFNPWRCLAEHRPLGGISRARRQVYQALSKFRHEHNGVMQAEPFAETGGAAADG
                     SR"
BASE COUNT          354 a          555 c          482 g          334 t
ORIGIN      
        1 gtaagaccgc gcaaacgcgc ctgaatgttc tcttccgtga cgtcgggctc gcggccttcg
       61 aaaacgggcg cgagggtacc gagcatctgg tgatacgccg gagaaatcgg aacgatatcg
      121 aaccggatcc tcagccgctc cgcgagcgcc cgcgcatcgt tcacgctgtg atccgaagaa
      181 aacggccccg gcatggccac cccacgaacg ttttcccgac ccaccgcatc gaccgcgatg
      241 gcagccgtaa gagaggaatc gatccccccg ctcaaaccga tcagcacact gccgaaaccg
      301 catttgcgaa tgtaatcgcg cgtgcccagc accagcgcct catagacggc ttcgcagtcg
      361 ccgggaaaag tcgcatgctg atcgccctcg ccggttacgg tatcgacaat caccaggtct
      421 tcgatgaacg acgctgccga ggcgataacg tttccctcgg catccatggc gaaactggtt
      481 ccatcgaaaa cgatctgatc gttaccaccc acctgattga ccacgatcgc aggcacttta
      541 tggcggcgca cgatagcgcg aaacatttcc gtgcgcaatt cccgcttgcc cagatggaag
      601 ggagaggcgt ttatactgac gagcatattc gccccggcct gcatcagctc atcgacgggg
      661 tcgcgcccat aaagcctgtg cggccagaac tgcttgtcgt tccaggcgtc ttcacagatg
      721 gtgagcgcga cgtcatctcc gcgcattttc cagatcaact gcgtatcggc ggggacgaaa
      781 tttcgcattt catcgaacac gtcataagtg ggaaggagga tcttggtctg ccgcatcgcg
      841 accttgccgc cccgaatgat cgccgccgag ttggttgctt gtttcccggt ttgtttgcgc
      901 gatcgaccga catacccggc gatgagcgcc agcggcagat ccgccgtcgc ggccgcgagt
      961 tggtcgaccg ccgcttccga ccgctcaatg aaacttggct tttcgaccag gtcgcgcggc
     1021 gggtagccgg ttatggacag ctcgggaaag acaatcagtt cggcatttcg cgccgccgcg
     1081 tcacgggcga aacggaccat gagcccgata ttgccggaaa ggtcgccgac ggtcggattt
     1141 atctgcccga gagcgatccg catttacatt tatcttagcg gcagagcgtt ttcggtagcc
     1201 ccggcgatct cgttcgccgg caaccttgct cacacgagct tccgctcggc gcgaagcttt
     1261 acaaagtacg gcaacggtgc ggacctggtg ttcttcgaag cgacgaggcg gttcgcttcc
     1321 atgccttgaa ggtacgcgaa aaccggaagt gggcaacatc gggaacgaac gttctggaga
     1381 gatcggcagg acgcggtgga caccctgtct ctatctactt ccgtccgccg ccgcccctcc
     1441 ggtttccgca aacggctccg cctgcatcac cccgttatgc tcatgccgga acttcgaaag
     1501 cgcctgataa acctgtcttc gagcccggct gatcccgccg agcgggcggt gctccgccag
     1561 gcatcgccac ggattgaacg acagattatc cccgaactcg acccgctccg ccgaatcgaa
     1621 aatctgcgcc ggaatcgtca gcgccgccac cttaagaaag ggcgaatccg cctcattcca
     1681 cgcaattccc ggatcctcga tcggcatcgt atatgcatcc gtctg
//
LOCUS       DATAVD010000247         1731 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3561055, whole genome shotgun sequence.
ACCESSION   DATAVD010000247 DATAVD010000000
VERSION     DATAVD010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3561055"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..244)
                     /locus_tag="VHX39_04520"
     CDS             complement(<1..244)
                     /locus_tag="VHX39_04520"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase"
                     /protein_id="HEX3990419.1"
                     /translation="MTTTRRFLFAGGTIAVIAALHAMRSTAAPGTAETFDVVHGDAEW
                     RKLLTRAQYDVLRQSGTERPFSSALLHEERNGVFDCA"
     gene            438..1202
                     /locus_tag="VHX39_04525"
     CDS             438..1202
                     /locus_tag="VHX39_04525"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3990420.1"
                     /translation="MRLKERVAIITGAAGGIGGAVARRFAAEGAHLCLADRWGCVGLA
                     EELTASGSRLIDIAMDVRDRSDILSMVERTLEAFGRVDVLVTAAGVVSTGNAETLTEA
                     QWDRVIAVNLKGVFLSCQAVIPAMRAARYGRIVNIGSILAKNGGNPRPWLDRTEQDRA
                     GNVAYGAAKAGVHAMTMYLAKELAADNITVNCVAPGPIVSAMTTNLPETFKAMLPVGR
                     LGRAEEVADAVTYLAGEQASFTTGEILDVNGGAWTD"
     gene            1288..>1731
                     /locus_tag="VHX39_04530"
     CDS             1288..>1731
                     /locus_tag="VHX39_04530"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX3990421.1"
                     /translation="MSLPKYQVLIGGARQDAASGEYFETHDPYKGAPWALIPRCAEAD
                     ANRAVEAASAVFQTGAWPAMTATQRGALLRKLGDLIAERAEDLAQTEVRDNGKLITEM
                     LGQTRYVPQWYYYYGGLADKVEGGVLPIDKAGVFNFTRWEPLGVVV"
BASE COUNT          332 a          505 c          585 g          309 t
ORIGIN      
        1 cggcacagtc gaacacgccg ttccgttcct cgtgcagcag tgcgctggaa aacgggcgtt
       61 cggtaccgct ctggcgcagg acgtcgtatt gcgcgcgtgt cagcagcttg cgccattccg
      121 catcgccatg aaccacgtcg aacgtctcgg ccgtgccggg ggcagcggtc gaacgcatcg
      181 catggagggc tgcgatcaca gcaatcgtcc cgcccgcgaa cagaaaacgt ctggtggttg
      241 tcatactcat cctccgctgc cgatgtgaga tgtgactccg gtgcgccggg tgcgttacgg
      301 gacaataccc catcatcggg aatattgtgg cgcgaaccga attctatcat ccgggcccga
      361 tggacgaaca tggtgcaacg cgcgagtttc cacatcgtgg catgaaatcc gtctgaacca
      421 tccgcgggag caggtcgatg cggctgaaag aacgtgtggc gatcatcacc ggggctgctg
      481 gagggatcgg aggcgccgtc gcgcgccggt tcgcggcgga gggtgcgcat ctttgcctcg
      541 ccgaccggtg gggttgcgtg ggtctggccg aggaactgac cgcctccggg tcgaggctga
      601 tcgacatcgc catggatgtg agagatcggt ccgacatcct gagtatggtc gaacgcactt
      661 tggaagcgtt cggaagggtc gacgtgctgg tcacggcggc cggcgtggta tcgaccggca
      721 acgcggaaac cctgacggag gcgcaatggg atcgcgtcat cgcggtcaat ttgaagggtg
      781 tgtttctgtc gtgccaggcc gtgatcccgg ccatgcgagc cgcgcgctac ggccggattg
      841 tcaacatcgg ttcaatactg gcgaagaacg gcggcaaccc aaggccgtgg ctcgaccgta
      901 cggaacagga ccgcgcgggc aatgtcgctt acggcgccgc gaaagccggt gtgcacgcaa
      961 tgacgatgta tctggcaaag gaacttgccg ccgacaacat cacggtgaat tgcgtggccc
     1021 ccgggccgat cgtgtcggcg atgacgacga acttgccgga gacgttcaag gcgatgttgc
     1081 cggtcggcag gctgggacgc gctgaggaag tcgccgacgc ggtgacctat ctggccggcg
     1141 aacaggcttc gttcacaacc ggtgagatac tggacgtcaa cggaggtgcc tggaccgact
     1201 gagcccgagc aacctcgggt ggcttgcccg gacgccatac gctatatgta ctgaaataca
     1261 gcgcggcagg cacgggagag cggtcggatg tcacttccaa agtatcaggt cctgattggc
     1321 ggagcaaggc aggacgctgc ctccggcgaa tatttcgaga cccacgatcc ctacaaaggc
     1381 gcgccctggg ctttgatccc gcgttgcgcc gaggctgacg caaatcgcgc cgtcgaggcc
     1441 gcaagtgccg tatttcagac cggcgcctgg ccggcgatga ccgcgaccca acgcggcgcg
     1501 ctgctgcgca aactcggcga tctgatcgcg gagcgggctg aggacctggc gcagaccgag
     1561 gtgcgcgata atggcaagct catcaccgaa atgctgggtc aaacccggta tgttccgcag
     1621 tggtattatt actacggtgg cctggccgac aaggtcgaag gcggggtcct tcccatcgac
     1681 aaagcgggcg tcttcaactt tacccgttgg gaacctctgg gcgtggtcgt g
//
LOCUS       DATAVD010000248         2448 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1700214, whole genome shotgun sequence.
ACCESSION   DATAVD010000248 DATAVD010000000
VERSION     DATAVD010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2448
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1700214"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..884
                     /locus_tag="VHX39_04535"
     CDS             <1..884
                     /locus_tag="VHX39_04535"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEX3990422.1"
                     /translation="LWTGSRDAKAGLDQLRSARIPVFYTPDKLARGLASRLTYHTWRE
                     RRLADGFASTPPRTASQDEAIAQAVGLGHPTLSESESKQLLASWGVESAREHLVGSAE
                     AAVEAAEQLGFPVVLKVDSPDILHKTEAGVVRLHLGDAAQVRTAYAEVLASAKAYAPQ
                     ARITGVSVQEMVRNGIEVIVGVSSDPQLGPVLLFGSGGVMVEVYNDVALRRCPITRAE
                     AQAMIAEVKGARLLRGFRGRPAADVAALEDTLVRVSHFAMQMEGRLAELDVNPVMVLP
                     EGQGVKAVDALVVLRGT"
     gene            994..1290
                     /locus_tag="VHX39_04540"
     CDS             994..1290
                     /locus_tag="VHX39_04540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009618210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /protein_id="HEX3990423.1"
                     /translation="MAATTLVQTRVDPALKERAAAVLEKMGLTVSDAVRILLTRVANE
                     GALPFPLTADPAAHDTWFREKVREALEDFRPAAPDDEVEAHFAGRRAAALRKAG"
     gene            1557..1811
                     /locus_tag="VHX39_04545"
     CDS             1557..1811
                     /locus_tag="VHX39_04545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019087318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Arc family DNA-binding protein"
                     /protein_id="HEX3990424.1"
                     /translation="MASIIVRNLPDEVHRALRVRAAQNGRSAEAEIRNILERAVKPTK
                     RVRLGDALAALGRKIRLTDEDIAAIDQTRDTSAAKPMTFE"
     gene            2044..>2448
                     /locus_tag="VHX39_04550"
     CDS             2044..>2448
                     /locus_tag="VHX39_04550"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3990425.1"
                     /translation="MNDMADTAHEPSTGQKTDFDAIVIGAGVSGLYQLYRLRELGLTT
                     RVFEAGSGVGGTWYWNRYPGARFDSESWTYGYSFSQELLDEWDWEEHFAGQPETERYL
                     NHVTDKLDLRRDIQFRTTVTSAHYQEDSRCWKV"
BASE COUNT          471 a          754 c          792 g          431 t
ORIGIN      
        1 tcctgtggac cggcagccgg gacgccaagg ctggcctgga tcaactcagg agcgcccgga
       61 tcccggtctt ctacacgccg gataaattgg cccgaggcct cgccagccgg ctgacgtatc
      121 acacgtggcg cgagcgccgg ctggccgatg gctttgcctc cacgccgccg cgcactgcgt
      181 cgcaggatga ggcgattgcc caggcggttg gcctggggca tccgacattg tcggagtccg
      241 aaagcaagca gctgttggca tcctggggcg tagaaagtgc gcgtgaacac ctggtggggt
      301 ctgcagaggc cgccgtcgag gccgcggaac agcttgggtt tcccgtggtt cttaaggttg
      361 attcgccgga tattctgcac aagacagagg ctggggtggt tcggctgcac ctcggcgatg
      421 cagcccaggt gcggaccgcc tacgcggaag ttttggcgag cgccaaggct tatgcgccac
      481 aggctcggat caccggcgtg tcagtgcagg agatggtccg caacggtatc gaagtcatcg
      541 tcggcgtttc cagcgacccg caactgggcc ccgtgctgct gttcgggagt ggcggcgtga
      601 tggtcgaggt ctacaacgat gtggcgctgc gacgctgtcc gattacgcgc gcggaagcac
      661 aggccatgat cgctgaggtc aagggagcca ggctgctgcg gggatttcgc ggccggccgg
      721 cggcagatgt cgcagcgctc gaggatacgc tggtgcgggt gtcgcacttc gccatgcaaa
      781 tggaaggcag gctggcggag ttggacgtca atccggtcat ggtgctgccg gagggtcagg
      841 gcgtgaaggc ggtggatgcg ctcgtcgtgt tgcggggcac atagtggtcc acgtaccgcc
      901 ccgaacggcg acgttgggtt gaggggcctc ttctactcgt attgtcatgc aattgaatta
      961 cattgaagga cttcgacaca ggaggagcct gccatggcgg cgaccacgtt ggtgcaaacc
     1021 cgagtcgacc ccgcactgaa agagcgagcg gcggcagtcc tcgaaaagat ggggctcacg
     1081 gtctcggatg ccgtgcgcat cctgctgacg cgagtggcga atgagggggc gctaccgttt
     1141 cccctgactg ccgacccggc cgcgcacgac acctggttcc gggagaaggt gcgcgaggct
     1201 ctggaagact tccgtccagc cgcgccggat gatgaagtgg aagcacattt cgcgggccgc
     1261 cgcgcggcgg cgcttcgcaa ggcgggatga gccgtgaggt agcgtcaatc ctgacctgga
     1321 acgatttccg tagatcggca ttgctaatcg ctccttcatc gacaccccgg aattggttgg
     1381 cgggtttcag tctccatcaa aaaatcaccc gagatcagag cgtcctgata atcgggcaaa
     1441 tcgacctgga attcggcgaa agttgcggcg cgagcgatcc gcgggcaccc cagtgcgaca
     1501 ctgccggcaa ttctctatga tgcaatcatc cccagcactc cagatagttt gacatcatgg
     1561 cctcgatcat cgtcaggaac ctacccgatg aggtgcatcg cgccctgcgg gtgcgggccg
     1621 cccaaaacgg ccgcagcgcc gaggccgaga ttcgcaatat cctggagcgg gccgtgaagc
     1681 caacaaagcg cgttcgcctc ggcgacgcac tcgccgccct gggccgaaaa atcagactta
     1741 cggacgaaga catcgcggcc atcgaccaga cgcgtgacac atcagcggca aaaccaatga
     1801 catttgaatg atcgtattcg ggaccaatcg cgcccctcac ccaaccgcac cccgatcggc
     1861 ctgtgccgcc cccgtccttt gccgcaacgc cagcacgtca ccgccagcgc gtcgccgtgg
     1921 ctggcgtccc ggccatgctc ggggttatcc tgccgcaaac gtccctgaac caccggcggc
     1981 ccgttcccat gcggaacggc gggccgctca aaccgccagc acgcttacca aggagatgtg
     2041 cgaatgaacg acatggcaga taccgcgcac gaaccgtcca ctgggcaaaa aaccgatttc
     2101 gacgccatcg tcatcggtgc cggcgtttcc ggcctgtatc aactctaccg cctacgcgaa
     2161 ctcggcctga caacacgggt gtttgaggcc ggctccggtg tcggcggcac ctggtactgg
     2221 aaccgttacc cgggcgctcg tttcgattcc gagagttgga cttacggcta ctcgttttcc
     2281 caggagctgc tcgacgaatg ggactgggag gagcatttcg ccggccagcc ggaaaccgaa
     2341 cggtatctga accatgtcac cgacaagctc gacctccggc gcgacatcca gttcaggacc
     2401 acggtgacct cggcgcatta tcaggaggac agccgctgct ggaaagtg
//
LOCUS       DATAVD010000249         3371 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_954458, whole genome shotgun sequence.
ACCESSION   DATAVD010000249 DATAVD010000000
VERSION     DATAVD010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3371
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_954458"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            230..961
                     /locus_tag="VHX39_04555"
     CDS             230..961
                     /locus_tag="VHX39_04555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990426.1"
                     /translation="MPTATQPHTTPTRRSAIGFTLAALTAGLTVPVLASAAKPDVDAE
                     LINAYDRLVEVETELWLLPLHDEYAPDFGPNHTRYRQLLDEQDRLIDLAGECQSAVNA
                     AGMVALARAAMTWTARDHEGNAVCNDFGEEMMLKLAESVAAGFVWPPRPGSCSTAHWA
                     PPSSAREIAEHRAAWDAKTAAVDAKVQAQQEARAAEALRSVTPALMTDDKLRERLEGA
                     RNIGAVSDQIIREYTAEMARRGPAA"
     gene            958..1242
                     /locus_tag="VHX39_04560"
     CDS             958..1242
                     /locus_tag="VHX39_04560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990427.1"
                     /translation="MSAPVTDSHDHIEPWAATLILSGVNRLDCALTALGCVMMDLGDD
                     PEQDDASEVQAVRWLYDVLRDEAHNIRALVAMAQGQAGPPGTPISVLEGA"
     gene            1239..1451
                     /locus_tag="VHX39_04565"
     CDS             1239..1451
                     /locus_tag="VHX39_04565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990428.1"
                     /translation="MSEAQITPTMGSAELTGVLGDLLCVAELWKLLGAEDEVEGCVVA
                     WLAAQNDALITRANNIAASLRHKASR"
     gene            1560..1919
                     /locus_tag="VHX39_04570"
     CDS             1560..1919
                     /locus_tag="VHX39_04570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990429.1"
                     /translation="MSDTAKPTPAQIPLDLLHGADQRFLAAVREIVSPLAVRFSDQDR
                     ALDRVASRIDTIAQDVAHLKQELRYRRRNLRGATKRRHLIDIAAMGGRCPCCAAAEFR
                     AYQSKRRRLAGQDTRLL"
     gene            2055..2654
                     /locus_tag="VHX39_04575"
     CDS             2055..2654
                     /locus_tag="VHX39_04575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990430.1"
                     /translation="MSKTSNFALRTFPEFKEAAQALVAVRSLYERHPGEDGVMSALAL
                     GSINDAFNTLIAKGLPAVLAIVDQDLAIRQGALEIAQDIMRFLLYHPSARRAFAANFP
                     AGTPPHRILNEIGAANREAAENGGSVSKAGGGLSAGELEIWGDLFERSSDDQDGTSRE
                     VAADALASYQRRVEELTAAKGAIQRALATQREYGTLSPV"
     gene            3039..>3371
                     /locus_tag="VHX39_04580"
     CDS             3039..>3371
                     /locus_tag="VHX39_04580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990431.1"
                     /translation="MPAKVVVVLNDLAFANRAVETLAIQNYEAITLPSPLAALKALKN
                     AARVELLITSTEHAEGQPNGVSLALMARSKCQDVKVIFVGTPDQAPYTEGLGTFLTSP
                     TTVEEVVET"
BASE COUNT          684 a         1044 c         1052 g          591 t
ORIGIN      
        1 gatcagggac gtgaccgatc gtcgctcggc ctccgccatc cgctgggcca gatccattac
       61 cgcttcgtcg attcgcgtgg tgaaaggttt tttacccatg aacgtgcatt gcacttgcaa
      121 acccctatga gacgtgcatc ataagggcgt tgcacgtgca acgcaagcag cacggccagg
      181 gcgctgccaa caccccgacc ggcctaacca aaaagcacgg gagttatcca tgcccacggc
      241 tacccaacca cataccacgc ccacccgccg atccgcgatc gggttcaccc tggcggcgct
      301 gaccgccggc ctgacagtgc cggtcctggc cagcgctgcg aagccggacg tcgatgcgga
      361 actgatcaat gcctacgatc gcctggtgga ggtcgaaacc gaactctggt tgctgcccct
      421 ccacgacgaa tacgcgccgg attttgggcc gaaccataca cgctatcggc aacttctcga
      481 cgaacaggat cgtctgatag atctggctgg cgagtgccaa tccgcggtca atgcggccgg
      541 tatggttgcg ttagcccgtg cggcaatgac ctggacggcc cgcgaccacg aaggcaacgc
      601 ggtgtgcaat gattttggtg aggagatgat gctcaagctg gccgaaagcg tcgcggccgg
      661 tttcgtgtgg cctccccgtc ctggcagttg ctcaacagca cattgggcgc cgccgtcgtc
      721 agccagggag atcgccgagc atagggcggc gtgggacgcg aagacggctg cggtagacgc
      781 gaaggtccag gcccagcagg aagccagggc ggccgaggcc ctccgatcgg ttacgccggc
      841 cctcatgacg gacgacaagt tgcgagagag gctcgaaggc gcacggaaca tcggggccgt
      901 aagcgaccaa ataatccgcg aatacactgc cgagatggcg cggcggggac cggcggcatg
      961 agcgcgccgg tgaccgattc ccacgatcac atcgaacctt gggccgcgac cttgatcctg
     1021 tccggcgtca accgcctgga ctgcgccctc accgcgcttg ggtgcgtcat gatggacctt
     1081 ggcgacgatc ccgaacagga cgacgccagc gaggtgcaag ccgtccggtg gctctatgac
     1141 gtgctgcgcg acgaggccca caatatccgc gcgttggtgg cgatggcgca ggggcaggcc
     1201 gggccgcctg gaacgcccat cagcgtgttg gagggcgcat gagcgaggca caaatcaccc
     1261 cgaccatggg aagcgccgaa ctgaccggcg tgctaggcga ccttctctgc gtcgccgaac
     1321 tctggaagtt gctcggcgcg gaggatgagg ttgaaggctg cgttgtcgcg tggttggcgg
     1381 ctcagaacga cgccctgatc acccgagcca acaacatcgc cgcgtccctg cggcacaagg
     1441 ccagccgatg acccgctcgt tcctggccgc tggggaggcg cctccagcca agccgcctac
     1501 gttcccctac aagccaccgg cgaacagccc gccccgacga aaaccgaagc cggcgcccag
     1561 tgtctgacac ggccaagccc acacccgcac agatcccgct cgatctgctg cacggtgctg
     1621 accaacgctt cctggcggcg gtgcgagaga tcgtatcgcc gctggctgtt cggttctccg
     1681 accaggaccg cgccctcgat cgtgtcgcat cccggatcga caccatcgcc caggacgtgg
     1741 cgcacctgaa gcaggaacta cgctaccggc ggcgcaacct gcgtggcgcg acgaagcgcc
     1801 ggcacctcat cgatatcgcg gcgatgggtg gacgctgccc gtgctgtgcc gcggcggagt
     1861 tccgggcgta tcaatcgaag cggcggcggt tggccggaca ggatacgcgg ttgctgtagg
     1921 ttattgcccg cggcggcaaa aactcagggc cgtctcgaaa gggcggcctt ttcgtatccg
     1981 atatcgcaca gcgaatttga tatcatcgta tatatatgat agcgtactcg gtcaataata
     2041 tcaggaaggc cgttatgtcg aaaacgtcaa atttcgcgct ccgtacattc ccggagttca
     2101 aagaggccgc gcaagctttg gttgcggtgc gttctctcta tgaaagacac cctggggaag
     2161 atggcgtgat gtcggcactc gccttgggta gcatcaacga tgccttcaac accctgatcg
     2221 ccaaggggct gcctgctgtt ctggcgatcg tggaccagga tctggccata aggcagggcg
     2281 cattagagat cgcccaggac atcatgcggt tcctgctgta tcacccatcc gcgcggcggg
     2341 cgttcgcagc aaactttcca gccgggacgc cgccacatcg tattctgaac gagatcggcg
     2401 ccgcgaaccg cgaggcagcc gagaacggtg gcagtgtgtc gaaggctggc ggcgggttga
     2461 gcgctggaga gttagaaatt tggggcgacc ttttcgaacg ctcttcagac gaccaggacg
     2521 gtactagtcg ggaagtggct gccgacgcgc tggcctcata ccaacggagg gtagaggaac
     2581 tcaccgccgc caagggggcg atccagcggg cgctggcgac tcaacgcgaa tatggcacct
     2641 tgtcaccggt ctagggcatc acctggcgca aaaggaggtt ctccgctctc accggagaac
     2701 atcgaccgcg cacggtgcgc cgaacattga attcaatcaa ccaactggcg caacgccgga
     2761 tcgttccgaa cgggcacggc gcccagagca ttgattttga acggcacgaa atggtgccgg
     2821 cggaaatggg ggtccgctta ctgtgcggag cctttgacgc cccagataga ccgaccatcc
     2881 ggcgcgttcg taagcatcag tgggtatcgg atcgcccttc gcagcggctc ttcaattcca
     2941 ggcataaaat tcgccactta cattgccata ctagaacgat atgggttccc tttcagcgaa
     3001 aatagcgtat catgccacgg ctctgattgg aggctgcgat gcctgccaaa gttgtcgtgg
     3061 tgctgaacga tttggcattt gctaatcggg cggtcgagac actcgccatt caaaactatg
     3121 aggcgatcac tctgcctagt ccgctggccg cgctcaaggc gctgaaaaac gctgctcgtg
     3181 tggaactgct gatcacctcc accgagcacg cagagggcca gcctaacggc gtgtccttgg
     3241 cgctgatggc tagatcgaag tgccaggatg tcaaagtgat cttcgtcggg acgcccgacc
     3301 aagcccccta cacagagggc ctcggtacct tcctgacgtc gccgaccacg gtggaagagg
     3361 tggtcgagac c
//
LOCUS       DATAVD010000250         3046 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_23824, whole genome shotgun sequence.
ACCESSION   DATAVD010000250 DATAVD010000000
VERSION     DATAVD010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3046
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23824"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1004
                     /locus_tag="VHX39_04585"
     CDS             <1..1004
                     /locus_tag="VHX39_04585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990432.1"
                     /translation="YSNFNQSGLNGTSDYNNIGVKASDNNTGYGNGGSCNVGYGYNGS
                     SYCDTGYNGYGGGFGFGYNSCGWQGSSSDCAGTPENQNTSNNCGNGNSGGGYNFGGGY
                     GDSYGYGCGGGNSNSGSSCGDSGSVTQTQGNILGAADTVTVSATTTSNTTVTASDTKE
                     VQVLGNNSNISVNGTATTSSLTKIYGTADTLEFTYNPGNTVSLKQMQTGLATVTGTNS
                     NSMAFIEISNNANPFASNASIYFEGAVTSGEKIYADATTNELTNTAITGGHFSTTAGA
                     DMFAYVFTSQAAFQSGAAPVQMMAYNTSGSQAMHLGDTIGSLSLVGFVGSSGGHLVS"
     gene            complement(1064..1915)
                     /locus_tag="VHX39_04590"
     CDS             complement(1064..1915)
                     /locus_tag="VHX39_04590"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3990433.1"
                     /translation="MGKLAGKVAIVTGASRGIGQQIAELFASEGAKVICAARTLNEGD
                     HRMLEGSLSRTVELIRGKGGEATAVTADVSLEQDCIALVQAGRLAYGPIDILVNNAAL
                     NYYLPTETYPTSRWVRCFAVNVHAPFILAKEVLADMIPRRSGAIVNISSGSAIGPGRG
                     PYDDKTAHGGVMYGATKAALERFTQGLGQEVAQYDGITVAAVSPSQVVPTPGTIHHKL
                     VNGIDDPRGEPPMMMARAALLLASEAAEKVNGRVTYSQQILKEFGWIEGAKGRGVTIR
                     GSGYSLV"
     gene            complement(1915..2706)
                     /locus_tag="VHX39_04595"
     CDS             complement(1915..2706)
                     /locus_tag="VHX39_04595"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX3990434.1"
                     /translation="MRWIRFSKDGKTAHGSLAGETITEIEGEPWGNTAPTGRTLALSE
                     VKLELPVIPRTFYCAGINYAAHIREMAHKRGVEPVFPEKADIGYRANNALIAHNENVV
                     IPHHAPPKVNYEGELVVIIGKQVKHLTEANAMSCVFGYTIGNDVSERTWQRGDRTFWR
                     GKNTDTFKPMGPWIETDVDLDAMETIVSVNGKEDLRFKTNDMIFGIAHYIATMTQYLT
                     LYPGDVIWMGTDGTSPDLVDGDVVEVELTGIGVLRNPFVLEKGSA"
     gene            complement(2709..>3046)
                     /locus_tag="VHX39_04600"
     CDS             complement(2709..>3046)
                     /locus_tag="VHX39_04600"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3990435.1"
                     /translation="LLLTHPITGRKVLYCNEGYAIRINELSQAESDGMLDYLFRHQLE
                     MRFRYTHDWNENDLLIWDHLGTIHRAIADYGPDEIRLMRRCQVMATKVFDPAFLRPAF
                     EASRLQKVH"
BASE COUNT          616 a          985 c          869 g          576 t
ORIGIN      
        1 gctacagcaa cttcaaccag agcggcctga acggcaccag cgactacaac aatatcggcg
       61 tcaaggccag cgacaacaac accggatacg gcaacggcgg ctcgtgcaac gtcggctacg
      121 gctataacgg gtcgagctac tgcgataccg gctacaacgg ctatggcggc ggttttggct
      181 tcggctacaa tagctgcggc tggcaaggat cttcctccga ctgcgccgga acgccggaaa
      241 accagaacac cagcaacaat tgcgggaacg gaaattccgg aggcggatac aacttcggcg
      301 gcggatacgg cgacagttat ggctacggct gtggcggcgg caacagcaac agcggcagtt
      361 cctgcggcga ctcaggctcc gtgacgcaga cccagggcaa catccttggc gccgcggata
      421 cagtcaccgt ttccgccacc acgaccagca acacgacggt aacggcctcc gacaccaagg
      481 aagtccaggt actcggcaac aacagcaaca tctcggtcaa tggcacagcg accacgagca
      541 gcctgaccaa gatctacggc acggccgaca cgctggaatt cacctacaac cccggcaaca
      601 ccgtctcgct gaagcagatg cagaccggtc tggcgactgt cacgggcacc aacagcaatt
      661 cgatggcgtt catcgagatc agcaacaacg ccaacccgtt cgcctcgaac gccagcatct
      721 atttcgaggg cgcggtgacc tccggcgaga aaatctatgc cgacgccaca acaaacgaac
      781 tgacgaacac cgcgatcacc gggggccatt tctcgacgac ggcgggcgcg gacatgttcg
      841 cctatgtctt caccagccag gcggccttcc agtcaggcgc ggcgccggtg cagatgatgg
      901 cctacaacac cagcggcagc caggcgatgc acctgggtga caccatcggc agcctttcgc
      961 tggtcggctt cgtcggcagc agcggcggcc acctggtctc ctgacgctac cggaacggcg
     1021 ctgaaagcgg ggcgggtggc aatgcccacc ccgtttcatt tgatcagacc agcgaatagc
     1081 cggacccacg gatggtgacg ccgcgaccct ttgcgccctc gatccagccg aactccttca
     1141 atatctgctg gctataggtc actcggccgt tgactttctc cgccgcctcg ctcgccagca
     1201 gcaacgcggc ccgcgccatc atcatgggcg gctcacccct cggatcatcg attccattga
     1261 ccagcttgtg gtggatcgtc cccggcgtcg gcaccacttg cgatggcgaa accgccgcca
     1321 cggtgatccc atcgtattgc gcgacttcct gccccaggcc ttgggtaaac cgttccagcg
     1381 ccgccttggt cgcgccatac atgacgccgc cgtgcgcggt cttgtcgtcg tatggccctc
     1441 tgcccgggcc gatcgccgac cctgaactga tgttgacaat tgcgccggac cgtcggggaa
     1501 tcatgtcggc cagcacttct ttcgccaata tgaacggcgc atgcacattg accgcgaaac
     1561 agcgcaccca gcggctggtc ggataggtct cggtgggcaa atagtagttc agcgcggcat
     1621 tgttcaccag aatatcgatc gggccgtagg ccaaccgacc cgcctgtacc agagcgatgc
     1681 agtcctgttc gagcgagaca tcggccgtca ccgccgttgc ctcaccgccc ttgccacgaa
     1741 ttagttcgac cgtccgcgac agcgaacctt ccagcatccg gtggtcgcct tcgttcagtg
     1801 tgcgcgccgc gcagatcacc ttcgcccctt ccgaagcaaa caactcagca atctgctgcc
     1861 cgatgccgcg gctggcaccc gtaacgatgg cgactttgcc cgcgagtttg cccatcaggc
     1921 gctgcctttc tcaagcacga acgggttccg cagcaccccg atgccggtca gctccacttc
     1981 gacgacgtcg ccgtccacca ggtccggcga ggttccgtcg gtgcccatcc agatgacatc
     2041 gcccggatac agcgtcaggt actgggtcat cgtcgcgatg taatgtgcga tgccaaagat
     2101 catgtcgttg gtcttgaagc gcaggtcttc cttgccgttg acactgacga tggtttccat
     2161 tgcatccaga tcgacgtcgg tctcgatcca cggccccatc ggcttgaacg tatcggtgtt
     2221 cttgccgcgc caaaacgtgc gatcgccacg ctgccacgtc cgctcactga cgtcattgcc
     2281 gatggtgtag ccgaacacgc aggacatcgc attggcctcg gtcagatgct tgacctgctt
     2341 gccgatgatc acaaccagtt cgccctcgta attgaccttc ggcggagcat ggtgtgggat
     2401 caccacgttc tcgttgtgtg cgatcagagc gttgttggcg cgatagccaa tgtcggcctt
     2461 ttccggaaaa accggctcga cgccgcgctt gtgtgccatc tcgcggatat gggctgcgta
     2521 gttgatgccc gcgcagtaga aggttcgggg tattaccggc aattccagct tcacctcgga
     2581 cagagccagg gtgcgccctg tcggcgccgt gttgccccac ggctcgcctt cgatttcggt
     2641 gattgtctca ccagccagag agccatgggc cgtcttgccg tctttgctga accggatcca
     2701 acgcatgatc aatgtacctt ctgcaaacgg gacgcctcga acgcgggacg caggaacgcg
     2761 gggtcgaaaa ccttggtggc catgacctgg cagcgccgca tcaggcgaat ttcgtcagga
     2821 ccgtaatcgg cgatggcacg atggatagtg ccaagatgat cccagatcag aagatcgttc
     2881 tcgttccagt cgtgcgtgta gcgaaaccgc atttccaact gatggcggaa cagataatcc
     2941 agcattccgt cgctttctgc ctgcgacagt tcattgatgc ggatcgcata gccttcgttg
     3001 cagtacagaa ccttgcggcc agtgatcggg tgtgtgagga gcagcg
//
LOCUS       DATAVD010000251         3417 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3561517, whole genome shotgun sequence.
ACCESSION   DATAVD010000251 DATAVD010000000
VERSION     DATAVD010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3417
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3561517"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..910)
                     /locus_tag="VHX39_04605"
     CDS             complement(<1..910)
                     /locus_tag="VHX39_04605"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3990436.1"
                     /translation="MSATTSAVAVSAEPGRRWLPAIIVWALLLTVPFWLPLMGGYTAL
                     AGRVLVLGLAAMSFNLLLGFTGFMSFGHAAYFGLGAYGAGLVLRYVAASTPLAILAGV
                     LLGGLAGTLFGLLIVRRRGVYFAMVTVAFGQIAFYVAYSWNDLTGGYDGLRGFSRAPL
                     DLGFTTIDIANSDKAFYYFLLVVFAIATGLQGLLLASPFGRTLLAIRENERRARFLGI
                     PIERHVWMSFSISCAFTALAGALYALLNNFADPMGLHYSLSGEIVIMAVMGGMRAFWG
                     PLVGAAVFVVVQDYISSMTVNWMSFVG"
     gene            complement(907..1776)
                     /locus_tag="VHX39_04610"
     CDS             complement(907..1776)
                     /locus_tag="VHX39_04610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011930591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3990437.1"
                     /translation="MLQLVLFNVTNGLIIGAFYVLMALGLSLILNLSNVINFAHGNFL
                     ALGGYIAYVLTPYIGFWGALVVSPILTAVFGFVIERLMIRRVYSRDPVYSLLLTFGLA
                     FIMQDACRYIWGPNGLSTTMPDALAAPLSPALFFITWYRIFMVVIVIAAVVGLFAFLR
                     YTRVGIRIRAGTLDLDTVAALGVNVGMLRSFNFAVGSLLAGLAGVLAAGQIGLNPNMG
                     DDLLMPSFIAIIVGGVGSLTGTLLGGLLIGVAAALTTVFWPAASEAVIYVIMLVVLIV
                     RPRGLMGEEGMLI"
     gene            complement(1815..2957)
                     /locus_tag="VHX39_04615"
     CDS             complement(1815..2957)
                     /locus_tag="VHX39_04615"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990438.1"
                     /translation="MPVKIGMVDPLTGILSALAASEVEGAKYAVGIINKNNGILGRQV
                     QLLVEDSANDVGTGVQKTHKLIERDKVDVIFGDVNSGIAYAMSQVTSEAKVFHIVPGG
                     HTDPITGKDCKWNVFRICNTTSMDAAAVTGDLVKRFGKKFFFITPDYAYGHTLQDSFI
                     KNLKALGGEYQAEMLPINTTEFSATLIKAKAYKPNVLLNNMGGLAQIDCMKQFTQFGM
                     QKEMHLGGALFELESIRAVPPEAQAGSWDMEWWWNQPNVPEVVKFVADFRKANGKTPS
                     ARHWFGYVAVNSVKLGAEKAKSLEGPKMSLAMEGLVLPPEIALQPGPVAYRAGDHQLM
                     SNIFVGDVHPPKGGNPDDVFTVSTLVPGEKAAGPVSETGCKMVHPA"
BASE COUNT          739 a         1111 c         1014 g          553 t
ORIGIN      
        1 gcccgacaaa cgacatccag ttgaccgtca ttgaggaaat atagtcctgc acaaccacga
       61 acaccgcggc accgaccagc ggaccccaga acgcccgcat gccgcccatg accgccatga
      121 taacgatctc acccgacagc gaataatgca ggcccatcgg atcggcgaag ttgttcagca
      181 aagcgtacag cgccccggcc agcgccgtga aagcgcagga gatcgagaac gacatccaga
      241 catgccgctc gatcggaatg cccaggaagc gggcgcgccg ctcattctcc cgaatcgcca
      301 gcaaggtgcg gccgaaggga gacgccagca gcagcccttg cagcccggtc gcgatcgcga
      361 acaccaccag caggaagtaa taaaacgcct tgtcgctgtt ggcgatgtcg atcgtggtga
      421 agccaaggtc caacggcgcc cggctgaaac cgcgcaggcc gtcgtagccg ccggtcaggt
      481 cgttccagct ataggcgaca tagaaagcga tctggccgaa cgcgacggtg accatggcga
      541 aatagacgcc gcggcgcctg acgatcagca ggccgaacaa cgtgccggcc aacccgccca
      601 gcagcacccc cgccaggatc gccaacggcg tgctggccgc cacgtatctc agcaccagcc
      661 cggccccgta ggcgcccagg ccaaaatacg cggcgtgccc gaagctcatg aagccggtga
      721 agcccagcag caggttgaac gacatggcgg ccaggccaag cacgaggaca cggccggcaa
      781 gcgcggtata gccgcccatc agcggcagcc agaacggcac cgtcagcaac agtgcccaga
      841 cgatgatggc aggtagccag cggcggccgg gttcggccga caccgccacg gcggatgtcg
      901 tggcgctcat atcagcattc cctcttcgcc catcagtccg cgcggacgaa cgatcaggac
      961 aaccaacata atgacataga tcaccgcctc actggccgcc ggccagaaca cggtggtcag
     1021 cgcggcggcc accccgatca gcaatccccc cagcaacgtg ccggtcaggc tgccgacacc
     1081 gccgacgatg atggcgatga agctgggcat cagcaggtcg tcacccatat tcgggttcag
     1141 gccgatctga cccgccgcca ggacacccgc cagaccggcc agcaacgagc cgaccgcgaa
     1201 attgaacgac cgcagcatgc cgacgttgac acccagcgcg gcgacggtgt ccaggtccaa
     1261 cgtgccggcg cgtatacgga tgccaacacg ggtgtagcgc aggaaggcga acagcccgac
     1321 caccgcggcg atgacgatca ccaccatgaa gatgcgatac caggtaatga agaacagcgc
     1381 cggcgacagc ggtgcggcca gcgcgtccgg catcgttgtc gacaggccat tcgggcccca
     1441 gatgtagcga cacgcgtcct gcatgatgaa cgccagcccg aaggtcagca gcaggctata
     1501 gaccgggtca cgcgaataca cccggcggat catcagccgc tcgatgacga agccgaacac
     1561 cgccgtcagg atgggggaca ccaccagcgc cccccagaac ccgatataag gcgtcagcac
     1621 gtaggcgata tagccgccca gggcgagaaa attgccatgg gcgaagttga tgacgttgga
     1681 cagattgaga atcagcgaca ggcccaacgc catcagcacg tagaacgcgc cgatgatgag
     1741 accgttcgtg acgttgaaca gtacaagctg cagcatcggc cgcctttcgg tggtcggagt
     1801 tcagggcgtg ggcgtcaggc gggatgaacc atcttgcaac cggtctctga aaccgggcca
     1861 gcggcctttt ccccgggaac caaggtgctg accgtgaaca cgtcgtccgg attgcccccc
     1921 ttcggcggat gcacatcgcc gacgaagatg ttggacatca gctggtggtc gccggcacga
     1981 taggcgaccg ggcccggctg caacgcgatc tccggcggca ggaccagccc ttccatcgcc
     2041 agggacatct tgggcccctc cagcgatttg gccttctccg cgcccagctt caccgaattg
     2101 accgccacgt agccgaacca gtgccgagca ctgggggtct tgccgttggc cttgcggaag
     2161 tccgcgacga acttcacgac ctcggggacg ttgggctggt tccaccacca ctccatgtcc
     2221 cacgatcctg cttgcgcttc cggcgggacc gctcggatcg attcaagctc gaacagcgca
     2281 ccgcccaggt gcatttcctt ctgcatgccg aactgggtga actgcttcat gcagtcgatc
     2341 tgcgcaaggc cgcccatgtt gttcagcagc acgttgggct tgtaagcctt cgccttgatc
     2401 agcgtcgccg agaactcggt cgtgttgatc ggcagcattt cagcctgata ctcaccgcca
     2461 agcgctttga gattcttgat gaagctgtcc tgcagggtat ggccgtaggc atagtcgggc
     2521 gtgataaaga agaatttctt gccgaaccgc ttgaccaagt cgccagtgac cgccgccgca
     2581 tccatcgacg tcgtgttgca gatgcggaac acgttccact tgcagtcctt gccggtgatc
     2641 gggtcagtat ggccgcccgg cacgatatgg aacaccttcg cttcgctggt cacctgcgac
     2701 atcgcatagg caatgccgga gttcacgtcg ccgaagatga catcaacctt gtcgcgctcg
     2761 atcagcttgt gggtcttctg cacaccggtg ccgacatcat tggcggaatc ttccaccaga
     2821 agctgcacct ggcggccaag aattccattg ttcttgttga tgatgcccac agcgtacttg
     2881 gcgccttcga cctcgctggc ggccaaagcg gacaggatgc cggtcagcgg atcaaccatg
     2941 ccgatcttca ccggcacctc accgcgggcg gcgataatcg ccggcgcgct gagcaggccc
     3001 gccgcagcgg tggccttgaa caatgtccgc cgtccgaatc cagtcgagat tgtggtccgc
     3061 atcttctatc gtctcccatg tcgggcgatt gcgcccgctc gttccccgtg gccagcccgt
     3121 tgcaagcctg tatcagtgat atctgctcag gatcggggcg tcgagagcaa attcaacccg
     3181 aatcacagga tggccttaat ttcatggttc gaaacagaca gccgggaatg acaaaagatc
     3241 agcggccgga gacgccaacg acgccgtgaa accaacagcc atctccgtgc ttggcgatgc
     3301 tgccccggat gggtatatgc tatcaaagct gtaggtgccc gaatgagaat acttatctgg
     3361 cagtggggga gacgcggcgc aggcccgcgc ttcgcaacct gtcttgccga ttcgttg
//
LOCUS       DATAVD010000252         1884 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2444871, whole genome shotgun sequence.
ACCESSION   DATAVD010000252 DATAVD010000000
VERSION     DATAVD010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2444871"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1545
                     /locus_tag="VHX39_04620"
     CDS             <1..1545
                     /locus_tag="VHX39_04620"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEX3990439.1"
                     /translation="GFSYVISTGNEADLSMADFLDYMVEDPHTHAVMLFCEAVRNGPG
                     FVAALEKARRLSKPVIAIKVGRSDAGTRATASHTASLSGSHTAYHAIFERYGVIEAED
                     ADEAVAIAGLVVTCPLPKGRRVGVITVSGGGGAWMADTLSAFGLVVPNLSPASQVALR
                     PLMPSYGASGNPVDVTAQGSNTGPAMMTVMEHLAHSDEIDILVLVASLASETRVSLDA
                     DRVRAVAESCGKPMAVWTYTLPSMFGRTSAAGCGLFVHSDLRNVGVAMGKLAGYAEAI
                     QRDLPEPFTPVSGRLYPGLPTIVPEYLAKQVLAAWLPDTREKLTSSAEDAADAAQRLG
                     FPVVLKVQSPQLPHKTEAGGVRLNLADREAVTAAYTAMMTDVARHAPDATIDGVLVQR
                     MAPKGHELVIGMVDDPTFGPIMMLGFGGTTVELFGDVVHALAPVDEVEATRMIVSLKS
                     ARLLTGFRGAKPIDLAPIATLVAALSRAALTLREQVREFELNPVIVHADGSGLTVADA
                     LLTMKT"
     gene            1559..>1884
                     /locus_tag="VHX39_04625"
     CDS             1559..>1884
                     /locus_tag="VHX39_04625"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3990440.1"
                     /translation="MLSIEPTGAILGATIRGIDLSQPISETEFGHILLALGQHGVLRF
                     PGQQLDIGDVKRFSELFGEIQGSPISAVDATRPYPEVGIRSNIKEGGAYIGSPDAGQD
                     WHTDMS"
BASE COUNT          322 a          563 c          634 g          365 t
ORIGIN      
        1 ggcttcagct acgtcatctc caccggcaac gaagccgacc tgtcgatggc cgacttcctg
       61 gattacatgg tcgaggaccc gcacacgcac gcggtcatgc tgttctgcga ggcggtccgt
      121 aacggccctg gttttgttgc cgccctggag aaagcccgcc gcctgagcaa gccggtcatc
      181 gccatcaagg tcggccggtc cgatgccggc acacgagcga ctgcctccca taccgcgtcg
      241 ttgtccgggt ctcacacggc gtatcacgcg atattcgagc ggtacggcgt gatcgaggcc
      301 gaggatgcgg acgaagccgt cgcgatcgct gggcttgtgg tgacctgccc gctgccgaag
      361 ggccggcgcg tcggggtcat caccgtttcc ggcggtggcg gcgcctggat ggccgacacg
      421 ctgtccgcgt tcggattggt cgtgccgaat ttgtcgccgg cctcgcaggt ggcgctgcgc
      481 ccgttgatgc cgtcctatgg tgcctcgggc aatcccgtcg atgtcacggc gcaaggttcc
      541 aacaccgggc cggcgatgat gacggtgatg gaacatcttg cccattcgga cgaaatcgac
      601 attctggttt tggtcgcctc gttggccagt gagacgcgcg tgtcgctgga cgctgaccgc
      661 gtgcgtgccg tggcggaaag ctgcggaaag ccgatggcgg tatggaccta tacgctgccg
      721 tcgatgttcg ggcggacctc ggccgcgggc tgtggtttgt tcgtgcatag cgatcttcgg
      781 aatgtcggcg tggcgatggg caagctggcg ggctatgccg aggcgattca gcgcgatctg
      841 ccggaaccgt tcacgcccgt gtccggccgc ctgtatccgg ggctgcccac tatcgtgccg
      901 gaatatctgg ccaaacaggt cctggctgcg tggctgcccg atacgcggga gaaactgacg
      961 tcatcagccg aggatgccgc cgatgcggca cagcggctgg gctttccggt tgttttgaaa
     1021 gtgcaatccc cgcaattgcc gcacaaaacc gaggccggtg gggtgcggct gaacctggcg
     1081 gatcgagaag cggtgacagc ggcctatacg gcgatgatga cggatgttgc acgccatgcg
     1141 cccgacgcga cgatcgatgg ggtcctggtg caacgcatgg cgcccaaggg ccatgaactg
     1201 gtcatcggca tggtggatga tcccacattc ggtcccatca tgatgctggg ctttggcggc
     1261 acgacggtgg aactgttcgg cgacgtcgtg catgcgctgg cgccggtcga tgaggtggaa
     1321 gccactcgga tgatcgtgtc gttgaagtcc gcccgcttgc tgaccggatt ccgcggtgcc
     1381 aaaccgatcg atctggcacc gattgcgacc ctggtcgcgg cactatcccg agcggcattg
     1441 acgctgcggg agcaggttcg ggagtttgaa ttgaatccgg tgatcgtgca tgccgacggc
     1501 tccggcctga cggtcgccga tgcgttgctg acgatgaaaa cctgaggagg attcgaccat
     1561 gctcagcatc gaaccgaccg gcgcgattct tggcgccacg atccgaggca tcgacctttc
     1621 acagccgatt tccgaaacgg aattcgggca tatcctattg gcgctcggcc agcatggcgt
     1681 gctgcggttt cccggccagc aactggatat cggcgatgtc aagcggttct cagaattgtt
     1741 cggcgagatc cagggcagcc ctatcagcgc cgtcgatgcg acacggccat acccggaggt
     1801 cggcatacgt tccaacataa aggagggggg cgcctacatc ggcagtcccg atgccgggca
     1861 ggactggcac accgacatgt cgta
//
LOCUS       DATAVD010000253         2468 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_954881, whole genome shotgun sequence.
ACCESSION   DATAVD010000253 DATAVD010000000
VERSION     DATAVD010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2468
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_954881"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            169..1317
                     /locus_tag="VHX39_04630"
     CDS             169..1317
                     /locus_tag="VHX39_04630"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3990441.1"
                     /translation="MPCLNEAETLATCIGKAMAYLQRSGIQGEVLIADNGSTDGSQAI
                     AVAAGARVQPIPLKGYGSALLGGIRAAHGRYVIMGDSDDSYDFSDLDAFVDKLRDGHA
                     LVMGNRFKGGIRPGAMPPLHRYLGNPVLTAVGRIFFRSPCGDFHCGLRGFDRAAILDL
                     DLQAPGMEFASEMVVKATIHNLKITEVPTTLSPDGRSRPPHLRSWRDGWRHLRFLLLF
                     SPRWLFLYPGLGLMALGVASMVWLLPEPRMVGRITLDIHTLFYASLAVVVGFHSALFY
                     VFARLYGMREGLVPPDERFLRMTGALTLEAGLLAGLILLLVGIGLAVVALSAWSQTAF
                     GVLSPETAMRLVIPSGTCVLLAFQTAYGAFFLSVLGIRSRRRSPATDT"
     gene            complement(1371..>2468)
                     /locus_tag="VHX39_04635"
     CDS             complement(1371..>2468)
                     /locus_tag="VHX39_04635"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3990442.1"
                     /translation="FRSDLDAACDRFVSWPERAPTRLDRVISLARTVPVAVASDRSKA
                     GSVCIRRALTANPDVVVVDFPHAGVLLPGNIDAASVMFTHNVEAEIFERHATRAKGLW
                     RPIWVDQSRKMARFESDTLRRFDTVIAVSQRDADMLSKRYELARVEAIDTGVDLEFFA
                     PAAPDSGADLAPEGGTVVFTATMSWPANVEGIHFLLDEVWPTLTAARPGIKALIIGRN
                     PPASLTDKIKQRGLNVTLTGFVDDIRPYVAQSHVYVIPLFVGSGTRIKAFEAMAMGRP
                     VVSTSLGIEGLDVTDGEHFLRADNAKAFSREILRLLDDAALRTRLAGAARALMEQRFS
                     WKNVAAQFEAICLNAFERRRMATAGPRHDSD"
BASE COUNT          467 a          766 c          732 g          503 t
ORIGIN      
        1 gtttcaatcg catggcaccg tgcgcaaggc acatcggaat gcttgtgtca cgccgggcca
       61 acggtccgat ggatcgcata acagcgcgtc gcattcatga atgatgcggt cattcaaaca
      121 tcaaatcttc cagttgccca atgcccgccg tgcgaactca caatcctcat gccgtgtctg
      181 aatgaggcgg aaacgctggc gacctgtatc ggcaaggcaa tggcgtacct gcaacgctct
      241 gggatccagg gtgaggtcct gattgccgac aacggcagca ccgatgggtc gcaggcgatt
      301 gcggttgctg ccggcgcccg cgtccaacca attcctttga aaggctatgg cagcgctctt
      361 ctgggcggca ttcgggctgc gcacgggcga tacgtcatca tgggcgattc agacgacagt
      421 tacgatttca gcgaccttga cgcgttcgtt gacaagttgc gcgatggtca cgcgctggtc
      481 atgggcaatc gctttaaggg cggcatccgg cccggcgcga tgccacctct acatcgctac
      541 ctgggcaacc ccgtgctaac cgccgtaggc cgcatattct tccgcagccc atgcggcgac
      601 ttccactgtg gtctccgggg cttcgatcgc gccgcaattc tggacctcga cttgcaggca
      661 cccggaatgg aattcgccag cgagatggtg gtcaaggcca ctatccacaa cctgaaaatc
      721 accgaggtgc cgacaaccct gtcccccgac ggccgctctc gcccgccgca cctgcgaagc
      781 tggcgcgacg gatggcgcca tttgcggttc ttgctgctgt tcagcccacg ctggctgttt
      841 ctttatccgg gcctcggact gatggcctta ggcgtggcaa gtatggtgtg gctgctgccg
      901 gagcccagaa tggttggccg gattacgctc gacatccaca cgctgtttta cgcgtcgctc
      961 gccgtggtgg tcgggtttca ttcggcgctg ttttacgtgt tcgcgaggct gtacggcatg
     1021 cgcgagggat tggtgccgcc cgatgaacga tttcttcgaa tgaccggagc gctgacgctg
     1081 gaagccgggc tactcgccgg acttatattg ttgctggtgg gcatcgggct tgcagtcgtc
     1141 gctctgtcgg cgtggagcca gactgcgttc ggcgtgttgt ctcccgagac ggcgatgcgc
     1201 ctggttatcc cgtcaggtac ctgcgtgttg ctggcatttc agaccgccta cggtgcgttt
     1261 tttctgagtg tcctgggaat tcgctcccgc cgacgctcgc ctgcaaccga cacgtgatcg
     1321 gatcgatgtc gcgctcgtga ggaacacaac ttcgtgaacc tcgcgtcagg tcagtcgctg
     1381 tcgtgtctcg ggccagcagt cgccatccgc cgccgttcga acgcgttcag acatatcgcc
     1441 tcaaactggg ccgcgacatt tttccatgag aaacgttgct ccatcagagc gcgcgccgcg
     1501 ccggccagtc gggtacgcaa agcggcatcg tccagcaacc gaagaatctc acgggaaaaa
     1561 gccttggcat tgtccgcgcg cagaaaatgt tcgccgtctg tgacatccaa tccttcgatt
     1621 cccagcgacg ttgaaacgac aggccgtccc atcgccatcg cctcgaacgc cttgatacgg
     1681 gtgccgctgc cgacaaacag cgggatcacg taaacgtggc tttgtgccac gtagggacgg
     1741 atgtcatcca caaagccggt cagagttacg ttcaggccgc gctgtttgat cttgtccgta
     1801 agagacgcag gcggattgcg gccgatgatc aatgccttga tccccggacg tgcagcggtc
     1861 agtgtcggcc aaacctcatc caacagaaaa tggatgccct ccacattggc cggccaactc
     1921 atggtcgcgg tgaacaccac ggttcccccc tccggagcca gatcggcgcc gctgtccggc
     1981 gcggcaggag cgaaaaattc caggtcaacg ccagtatcga tggcttccac ccgggccagc
     2041 tcgtagcgct ttgacaacat gtcggcatcg cgctgcgata ccgcgatgac cgtatcgaag
     2101 cggcgcaatg tgtcagattc gaaacgcgcc atcttgcggc tctggtcaac ccagatcgga
     2161 cgccagagac cctttgcccg tgtcgcatgg cgttcaaata tctcggcttc gacattgtgc
     2221 gtgaacatca ccgaggcggc atcgatgttg cccggcagca gcacgcccgc atgcggaaaa
     2281 tccacgacca cgacatcggg gttcgcggtc agtgcgcgcc ggatgcagac gctacctgcc
     2341 ttcgatcgat cgctggccac tgcgaccggg acggtgcgcg ccaacgaaat tacccgatca
     2401 agtctggtcg gcgcgcgctc aggccaggag acgaaccgat cgcatgcggc atccagatct
     2461 gaacggaa
//
LOCUS       DATAVD010000254         1533 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3561821, whole genome shotgun sequence.
ACCESSION   DATAVD010000254 DATAVD010000000
VERSION     DATAVD010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3561821"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..1038
                     /locus_tag="VHX39_04640"
     CDS             124..1038
                     /locus_tag="VHX39_04640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3990443.1"
                     /translation="MPGLMEGKVAVVTGAGGGIGREIAIMMAGAGAKVIVADIGASLS
                     GDGGSNTPAQQTKALIEQNGGQAEICTESVAAWGSARKIIQAALDHYGRIDAVVNNAG
                     ILRDGIFHKMSEDDWLSVISVHLNGGFFVSRAAAEHYRTQESGSFVHITSTSGVIGNI
                     GQANYAAAKLGITALSKSIALDMQRYNVRSNCLAPWAWSRMTSSIPTTTPEQKAAVDK
                     LQKMTPDKNAPLAVFLSSDAAQGVTGQVFGTRMNEIYLFSSPRPIRIVHNAAGWTPES
                     IASHAAPALQQAFMPLDTSEQVFGWDPL"
     gene            complement(1042..>1533)
                     /locus_tag="VHX39_04645"
     CDS             complement(1042..>1533)
                     /locus_tag="VHX39_04645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="EmrB/QacA family drug resistance transporter"
                     /protein_id="HEX3990444.1"
                     /translation="MTGWTPAVSDMTVIVNTMLQGAGLGFVFVPLQVIAFATLEPALR
                     TEGTALLSLTRNVGSAIGISVTSALVSQNTQIAHATLASHITPLNRLFEGAAKSLMPT
                     TSHAAQVLNGMVTHQAQIIAYNDDWKLMMLLALPMLPLLLLMRGPKQGAHGAGPEHPA
                     VID"
BASE COUNT          300 a          484 c          473 g          276 t
ORIGIN      
        1 catcgtacga tcgcttgacc ctcgtaggct gtatcgcaca gttgccaata gattaccttc
       61 ggttgacgga cgttccttac cttacatgct tgcctccgaa caacataacg caggagatcc
      121 cgaatgcccg gcctgatgga aggcaaagtc gccgttgtga ccggcgccgg tggcggcatc
      181 ggtcgagaga tcgcgatcat gatggcggga gccggtgcga aagtcatcgt tgccgacatt
      241 ggtgcatcgc tcagcggcga cggcgggtcc aacacgcccg cgcaacaaac caaggccctg
      301 atcgaacaga atggcgggca ggccgagatc tgcaccgaat ccgtcgctgc ctggggatcg
      361 gcgcgcaaaa tcatccaggc cgctctggat cactacggcc gtatcgacgc ggtggtaaac
      421 aatgccggca tcctgcgcga cggcatcttc cacaaaatgt cggaagacga ctggctgtcc
      481 gtcatttccg tccatctcaa cggcggtttc ttcgtatccc gagcggcggc ggaacactat
      541 cggacgcagg aaagtggatc gttcgtccat atcacgtcta cgtccggtgt gatcggcaat
      601 atcggccagg ccaactatgc cgccgccaaa ctgggcatca ccgcgctgtc gaaatcgatc
      661 gccctggata tgcaacggta caacgtcagg tcgaattgcc tggcaccctg ggcctggagc
      721 cggatgacca gttcgatccc caccacgacg ccggaacaga aggccgcggt ggacaagttg
      781 cagaagatga cgccggacaa gaacgcgccg ctggccgtgt tcctgtcgtc ggacgcagcg
      841 cagggcgtga ccggacaggt gttcgggacg cggatgaacg agatctatct gttcagttcg
      901 ccgcgcccga tccgcatcgt gcacaatgcc gcgggctgga cgccggaaag cattgccagc
      961 cacgccgcgc cggcactgca gcaggcgttc atgccgctgg atacgtccga acaggtgttt
     1021 ggctgggatc cgctgtagcg gtcaatcgat gaccgccgga tgttcgggcc ccgcaccgtg
     1081 ggcgccctgc ttggggccgc gcatcagcag aagcaacggc agcatcggca acgccagcag
     1141 catcatcagc ttccagtcgt cgttgtaggc gatgatctgc gcctggtgcg tcaccattcc
     1201 gttcagcacc tgcgcggcgt gcgacgttgt cggcatcagg cttttcgccg ccccttcgaa
     1261 caggcggttc agcggcgtga tatggctcgc cagcgtcgcg tgggcgatct gcgtgttctg
     1321 tgacaccaga gcgctggtca ccgagatacc gatcgcgctg ccgacatttc gggtaaggct
     1381 caacaacgcc gtgccctcgg tgcgcaacgc cggttccagg gtcgcgaagg cgatcacctg
     1441 cagcggcacg aacacgaagc ccagcccggc gccttgcagc atcgtgttga cgatcaccgt
     1501 catgtccgac accgccggag tccagccggt cat
//
LOCUS       DATAVD010000255         4857 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1700779, whole genome shotgun sequence.
ACCESSION   DATAVD010000255 DATAVD010000000
VERSION     DATAVD010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4857
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1700779"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..568
                     /locus_tag="VHX39_04650"
     CDS             <1..568
                     /locus_tag="VHX39_04650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990445.1"
                     /translation="LVFGFVRQSGGHISIDSKPGFGTTVRIYLPAAIGASPGVEASDA
                     DASRRLAQLDQHSDQLTKTGSNMALNLGVAVPSPRNFDRIDQLAAATPDQDTLLPVLW
                     HRAETAVFASVAIPPGQLRCRLIVEPLPRQNGWDWAVWQPGAHGQRSRSGRASSVVSA
                     MAAAEDAARHWVKTDSPDNGLAASPADP"
     gene            897..3221
                     /locus_tag="VHX39_04655"
     CDS             897..3221
                     /locus_tag="VHX39_04655"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HEX3990446.1"
                     /translation="MVEHRNLEIIRDPSSWICRSIVPYATNNSNAFRNNMVLLMADDL
                     RTIYERTHLRFGEEVWLRLSAHEQTKAVYEEWRLLDTGQNGAWEQNGSTNGELVSSAT
                     TGRAVVRLRLTGHMSAWTVTNENILPTGRKTRALLAAVALSAPRPASRGRLAELLWSR
                     RPDEQARASLRQEIQLLLKALAPAKTEILHVTRDQLSLVQGVTWVDVDEIMRASNPRP
                     AALSLLDGELLEDLDGIDPAFDMWLTAERERLRDRARSMAEALLREQTDPGTVISAAR
                     RLLQIDRAHEEAWRALMRAHAGQGERGMAIQAYDRCRAVLAEMLDAAPSAETQTLLNE
                     IRGPSSKRLPPRPPRPVLVAEPVRPATPEPASGNVVTPDLLQQGVARVGVLPMRCVSL
                     PDDVAWLGPSLATEITTALSRFRWMSVISLNSLARFKQNGIDGTPPGQACGIDFLLDG
                     AVQRSRNKLRITLRLLDLRADNQVVWARRFDRPADDLLAVQEDIAGEVAAQIDPVMLL
                     IQARRGIANAEAGSSAHQLILRSVLLITRLERDGFRQAGDQLAQAIALEPDHGSAHAW
                     YAAWHVLLISQGWATDPRAAGERATELAQRAVVLDPYSAAVFAVAGHVRAVVDRSLQE
                     AAALHERALDLNPNLAAAWALSAVTHVLLGDVKEAERRFSRYKVLSPLDPYSFLFDAL
                     FGVVHLLKRDCLAAVTVGRTVTQLNPSYAAGHKLYLAALGHLGRGDETGIVQRRLRAI
                     EPDVTVERCLATFPLERPADRDYFAEGLRLAGLS"
     gene            3543..>4857
                     /locus_tag="VHX39_04660"
     CDS             3543..>4857
                     /locus_tag="VHX39_04660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
                     /protein_id="HEX3990447.1"
                     /translation="MARLVVVSNRVPVPGDRSPAAGGLAIGLADAVTAGSLWFGWSGR
                     RGHIASKGPTVTEIRGITYATIDLTEADYRHFYSGFSNGVLWPLLSYRLGQVNFRRHD
                     YAVYRTVNQTFATALAPLLRSDDLIWIHDYQLLAVGDALRALGAEQRIGFFLHTPFPP
                     PAIFCALPRAEELLEAMCACDVIGFHTVDYRDAFLQCVSVLLNTATNADGTFTWRGRR
                     VTAIVDPIGIDVGGFAATAVRSVENAAARRLADSLGGRPLGVSADRLDYAKGLPNRVQ
                     ALDHLFASHPEHRNHLIFLQVAAPSREELAVYRALRRELDRAVGDINGRYSEADWTPV
                     RYLTRTVGRTTLAAYYRLARLGIVTPLRDGMNLVAKEYIAAQNAADPGVLILSRFAGA
                     AEDMTDALIVNPFDAEEIAEAMHQGLAMPLDERQARHKSLLARIKA"
BASE COUNT          888 a         1475 c         1524 g          970 t
ORIGIN      
        1 cctggtgttc ggcttcgtcc ggcaatcagg cggccacatc agtatcgata gtaaaccagg
       61 gttcggaacg acggtgagga tctatcttcc tgccgcaatc ggcgcgagcc ccggcgtcga
      121 agcttcagac gccgatgcat cccgaaggct cgcccaactc gatcaacaca gcgatcaatt
      181 gacaaagacc ggtagcaaca tggcgttgaa tttgggcgtt gccgtcccga gtccgcgcaa
      241 cttcgatcgc atcgaccaac tggccgccgc cacgccggac caggacacgc tgttacctgt
      301 attgtggcac agggcagaga ctgcggtgtt cgcttccgtc gcgattccgc caggccagct
      361 tcgctgccgc ctcatcgtcg aacccctgcc ccggcaaaac ggttgggact gggcggtctg
      421 gcaacccggt gctcacgggc aacggtcgcg cagcggtcgt gcgtcgtcgg ttgtgagcgc
      481 catggcggcc gccgaagatg ctgccagaca ttgggtaaag accgattcgc ctgacaacgg
      541 attggccgcc tcgccagcgg acccgtaacg aatttccgac cgtccggccc ctgtccgcat
      601 cgaagccgag gcgtgacggt aatcattgaa taagatctgt gagagtgatt ccgatcgcaa
      661 gcgggttgcc agatggcggc caattgattc atgcattata aacatctaaa tattcaaccg
      721 attcatctga gtttcttcaa ttctttgccg tggaaatatt tatgatccag gacccttatt
      781 tgcgacacct gaaattacat tcgtgccaat gtggcgcttg aaccaaccgg ttggtcgaca
      841 tagtatcccg gcaactggcc agggaacggg cgattgactg aatatgatga cattccgtgg
      901 tcgaacaccg gaatctcgaa atcattcgcg atccctccag ttggatctgc cgtagcattg
      961 tcccgtacgc aaccaataat tccaacgcat tccgcaataa tatggtgttg ctgatggcgg
     1021 atgacctgcg aaccatctat gaacgcacgc atttgcgatt cggcgaagag gtctggctaa
     1081 ggctttctgc gcacgagcaa accaaagccg tctatgaaga gtggcgtttg ctggacactg
     1141 gccagaacgg cgcgtgggag cagaacggtt ccaccaacgg cgaactggtt tcatctgcga
     1201 cgaccggccg ggccgttgtg cgcctgcgtc tgactggcca catgagtgca tggacggtaa
     1261 caaatgaaaa cattttgccg acaggacgca aaacccgcgc cctgctggcc gccgtggcat
     1321 tgtcggcgcc tcggcccgcc tcgcgcggcc gcctggccga attgctctgg agccgccggc
     1381 cggacgagca ggcacgcgcg tcgttgcggc aggaaatcca gttgcttctg aaggcgcttg
     1441 ccccggcaaa aaccgagatc ctgcatgtca cccgcgacca gctttcgctg gtccagggtg
     1501 tgacctgggt cgatgtcgac gagatcatgc gggccagcaa tccccggcct gccgcgttgt
     1561 cgctgctgga tggcgaattg ctcgaagacc tggatgggat cgatcccgcg ttcgacatgt
     1621 ggctgaccgc ggagcgtgag cgtttgcggg accgggcccg cagcatggcg gaggcgttgt
     1681 tgcgcgaaca gaccgacccc ggcacggtca tttccgcagc acgccgattg ttacagattg
     1741 atcgcgccca tgaagaggcc tggcgcgccc tgatgcgcgc gcatgccgga cagggcgagc
     1801 gcggcatggc cattcaggcc tacgaccggt gccgtgccgt attggcggaa atgctcgatg
     1861 cggcaccgtc ggcggaaacc cagactctgc tgaatgaaat tcgtggcccc tcaagcaagc
     1921 gcctgccgcc gcgaccgcct cgcccggtac tggtcgcgga acccgtgcgt cctgcgacgc
     1981 ctgaacctgc ctcagggaac gttgtgacgc cggatctgct gcagcaaggc gttgcacgtg
     2041 ttggcgtgct gccgatgcga tgtgtcagcc tgccggacga cgttgcctgg ctcggaccca
     2101 gtctggccac ggagataacc accgctctgt cccggtttcg ctggatgtcg gtgatttcac
     2161 tgaattcgct cgcgcggttc aagcaaaacg gtatcgacgg cacgccgcca ggacaggcgt
     2221 gcggcatcga cttcctgctc gacggcgcgg tccagcgaag tcggaacaag ttacgcatta
     2281 cgctgcggtt gctggatctc agggccgaca atcaggtggt ttgggcgcgg cgattcgatc
     2341 ggccggcgga cgatctgctg gcagtgcagg aggacattgc cggcgaagtc gccgcgcaga
     2401 tcgatccggt gatgctgttg atccaggcgc ggcgcggcat cgccaatgcg gaggccggca
     2461 gttcggccca tcagctcatc ctgcgctccg tgctcctcat aacgcgcctg gaacgggatg
     2521 gcttccggca ggccggtgac cagttggccc aggcgatcgc attggagccg gatcacggtt
     2581 ccgcccatgc atggtacgcc gcctggcacg ttctgctgat cagccagggt tgggctaccg
     2641 acccgcgggc agcaggcgag cgtgccaccg aacttgcgca gcgggcggtc gtgctggatc
     2701 cttactctgc cgcggtgttt gccgtcgcgg gtcacgtacg cgccgtcgtc gatcgcagtc
     2761 ttcaggaggc ggcggcgttg catgaacgcg cccttgacct aaacccgaac cttgctgcgg
     2821 catgggcgct gtccgcggtt acgcatgtgc tgttgggcga tgtgaaagag gctgagcggc
     2881 gtttcagccg ctataaagtg ttgtcgccac tcgacccgta ttcgttcctg ttcgacgcac
     2941 tgttcggcgt cgtgcattta ttgaaacgtg attgcctggc agcggtgacg gtcgggcgga
     3001 cagtgaccca gctcaatccg tcgtatgcgg cgggccataa gctgtatctt gcggctctgg
     3061 gccacctcgg ccgtggggac gagactggga ttgtacagag gcggctgcgg gcgatcgagc
     3121 cggacgtaac cgtcgagcgc tgtctggcaa catttccgct ggaacgccct gccgaccgcg
     3181 actatttcgc cgagggcctg agactcgccg gactgtcctg atcccaccgc atggcggtgc
     3241 aggacattgt ccgcgctcct gtttggtgtc cggcctgcat cgtcacggct cagatcattg
     3301 gggtattcag ctcggttccc caattcatgg agatctttta acggcagttg ccgatcccag
     3361 aatttgccgg gcgttacctc gttttggatg gccaataccg gcacacagta gtcaccgtta
     3421 catgaaaact ccgcgacgcc ttaacgtaac agggaaccga gcaacatgat cggacgttga
     3481 accgagggtt accgttccgt tactccgtgc gagtgcggca cgcgaagcag gaaggaattc
     3541 atatggcacg ccttgtggtc gtatcaaacc gggtgccggt tccgggcgac cgcagcccag
     3601 cggcgggagg tctcgcgata gggctggccg atgcggtgac agctggctcc ctgtggtttg
     3661 gatggagcgg gcggcgggga cacatcgcct cgaagggccc aacggtcacc gagatccgcg
     3721 gaatcaccta cgcgaccatc gacctgaccg aagctgatta tcgccatttt tactcgggtt
     3781 tctccaatgg cgtgctttgg ccgctgttgt cctaccggct tggccaggtc aacttccggc
     3841 gccacgatta tgccgtctac cgcaccgtca atcagacttt tgcgacggcg ttggcgcctt
     3901 tgctgcgcag cgacgacctg atctggatcc atgactatca gttgctggcc gtcggcgacg
     3961 cattgcgcgc gttaggggcc gagcaacgca ttgggttctt cttgcacaca ccatttccac
     4021 cgccggcgat cttttgtgca ctcccacgcg ccgaagaatt gctcgaggcc atgtgtgcct
     4081 gcgacgtgat cggctttcac acggtggact atcgggatgc atttctgcaa tgcgtgtccg
     4141 tcctgctcaa taccgccacg aacgccgacg ggacgttcac ctggcgcggg cgtcgcgtaa
     4201 cggcgatcgt cgatccaatc ggcatcgatg tcggcggctt tgccgcgact gcggtccgca
     4261 gcgtcgaaaa tgctgccgct cggcgtctgg ccgatagtct cggagggcgg cctctgggcg
     4321 tcagcgccga tcggctggac tatgccaagg gcctgcccaa tcgcgtccag gcgttagacc
     4381 atctgttcgc aagccatccg gagcaccgca accatttgat atttttgcag gtcgccgcac
     4441 cgtctcgcga ggaactggcg gtctaccgcg cattgcgccg cgaattggac cgcgccgtgg
     4501 gcgacatcaa tggccgctat tcggaggcgg actggacgcc ggtccgttac ctgaccagga
     4561 cggtcgggcg gacaacgctg gccgcatatt atcgcctcgc ccgactgggg attgtgacgc
     4621 cgttgcggga cggcatgaac ctcgtggcaa aggaatacat cgccgcgcaa aacgccgctg
     4681 atccgggcgt gctgatcctc tcgcgttttg ccggtgccgc agaggacatg accgacgcgc
     4741 tgatcgtcaa tccgttcgac gcggaggaaa ttgccgaggc gatgcatcag ggactggcca
     4801 tgccgttgga cgaacgccag gcgcggcaca agtcgctgct ggcgcggatc aaggcgt
//
LOCUS       DATAVD010000256         2794 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3001286, whole genome shotgun sequence.
ACCESSION   DATAVD010000256 DATAVD010000000
VERSION     DATAVD010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2794
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3001286"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            232..741
                     /locus_tag="VHX39_04665"
     CDS             232..741
                     /locus_tag="VHX39_04665"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA];
                     GO_process: GO:0019439 - aromatic compound catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic-ring-hydroxylating dioxygenase subunit
                     beta"
                     /protein_id="HEX3990448.1"
                     /translation="MPSTAQRSASGVTRQQVEEFLFAEADLLDTWRLREWLALFDPEA
                     SGYYMPTTDLPDGDPGSDLFLIADDMGKLRSRVDQLLSGVTWAENPRSRTRRMISNVK
                     IDAADGDVLRIRANFVVYRMRFQNIDPYIGEYRYTLKVNGESFAFLERRAVLDLEALR
                     PHGKVSFIV"
     gene            761..1351
                     /locus_tag="VHX39_04670"
     CDS             761..1351
                     /locus_tag="VHX39_04670"
                     /inference="COORDINATES: protein motif:HMM:NF025178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX3990449.1"
                     /translation="MTWLTDRLTKLMTDRDQSVPALARQLGIERSRLSNILAGSALPN
                     ENLLRRLAQSFDEAPDEWVAQARRAEPDAPTRDVPAGFVRIASLSEIPDGVMKIVFND
                     LVVVANTAGRLHAFGNVCPHAAGPIGEGWLEGCVVECPWHNGQWDITTGKALTELATA
                     DIPVFEVRVVGDAIEVRLTPSVLAQKSPGGGETQAP"
     gene            1478..2320
                     /locus_tag="VHX39_04675"
     CDS             1478..2320
                     /locus_tag="VHX39_04675"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3990450.1"
                     /translation="MTGEHEAKMMLNNKVALVTGTSPNIGGGIAEALAAAGAALVAVD
                     ALADNAADCARYVESIGGRAIGITADVTDEAQVEAAVEQAVAAFGSIDILVNGAAFFN
                     RKGVLDMSLAEWDRQTKVILGGTFLFTKYVARRMIARGTGGAVINIASTAGHQGEPGN
                     IAYSTSKGGLLNFTRSAAMELVGHGIRVNSLTPTATDRSESYDRAERWGRTVTRPAAN
                     AGGPMDRFRSRVPMQRLPLPSDYGRAAVFLASDDAAMITGTDLRVDAGAIARYWAWDP
                     AADV"
     gene            2447..>2794
                     /locus_tag="VHX39_04680"
     CDS             2447..>2794
                     /locus_tag="VHX39_04680"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3990451.1"
                     /translation="MQDFSGKIAVVTGGGSGMGRELVRLLVAEGCAIAMCDVSPRGMA
                     ETRRLCEAAGLPQGLRLTSHVADVSNETDVLRFRDEVAAQHATDRIHLLFNNAGISGG
                     GSMIVNEQAEWERT"
BASE COUNT          515 a          876 c          944 g          459 t
ORIGIN      
        1 cgcgtagcgg tgctgaacgc ccactcgaga gagggcatag tgggtcagcg tgcgacctaa
       61 atgggtcgga agcggccgca acgtaaccac caccgcgcca agtacccgga tctggaatgc
      121 ccctcgcgca accgatcaaa atccccttgc cgacaagcca gccatcagtt gcgggcgcgc
      181 cggcgttcca atacgacttc ccgcgttttg aagcccaggg gagtcctgac catgcccagt
      241 accgcgcaac gctcggcaag cggcgtgacg cgacagcagg tcgaagagtt cctgttcgcc
      301 gaagccgatc tgctggacac ctggcggttg cgcgaatggc tcgcgctgtt cgatcccgag
      361 gccagcggct attacatgcc gaccaccgat ctgcccgacg gcgatcctgg cagcgatctc
      421 tttctcatcg ccgacgacat ggggaaactg cgctcccgcg tcgaccagtt gctcagcggc
      481 gtaacctggg cggaaaaccc gcgctcacgc acaagacgca tgatcagcaa cgtcaagatc
      541 gacgcagcgg acggcgatgt cctgcgcatc cgcgccaact tcgtcgtcta ccgcatgcgc
      601 tttcagaaca tcgatcccta tatcggcgaa tatcgttaca cgttgaaagt gaacggcgaa
      661 tcgttcgcgt tcctggaacg gcgtgccgtg ctggacctcg aggcgttgcg gccgcacggc
      721 aaggtcagct tcatcgtatg accagaggaa gcaaccgact gtgacctggc tgaccgatcg
      781 attgacgaag ctgatgacgg accgcgacca gagcgtgccg gccctggccc gccagttggg
      841 catcgaacgg tcgcggctga gcaacatcct cgccgggtcg gcgctgccga acgaaaacct
      901 gctcaggcgg ctggcccaga gtttcgacga ggcgccggac gaatgggtgg cgcaggcgag
      961 gcgggcggag ccagacgctc ccacacgaga cgtgccggcc gggttcgtcc ggatcgcaag
     1021 cctgtccgaa atcccggacg gcgtcatgaa gatcgtgttc aacgatctcg tcgtggtggc
     1081 gaacaccgcg ggccggctgc acgcgttcgg caatgtctgc ccgcatgccg cgggcccgat
     1141 cggtgagggc tggctggaag gctgcgtcgt cgagtgcccc tggcacaatg gtcaatggga
     1201 catcacgacc ggcaaggcgc ttacggagct ggcgacggcc gacattccgg tgttcgaggt
     1261 ccgcgtggtg ggcgatgcta tcgaggtcag gctgacgcct tccgtgctgg cacagaagtc
     1321 acccggggga ggcgagacgc aagcgccgtg agaccggtgg agccaggttc tgaccgatcg
     1381 cgatcgcccc ccacggcatg gccggccttg tgccgccggt ccacgacgtc atgatcccgt
     1441 gagtccaaga aggttggtgg ccggcacaag gccggccatg acgggtgaac acgaggccaa
     1501 gatgatgctg aacaacaaag tcgccctggt aaccggaacc agccccaata tcggcggggg
     1561 catcgccgag gcgctcgcag cggcgggcgc ggcgctcgtc gcggtcgacg cgctggcgga
     1621 caacgcggct gactgcgcgc gctatgtcga aagcatcgga ggccgggcca tcgggattac
     1681 cgccgacgtg actgacgaag cccaggttga agcggcggtc gagcaggcgg tggccgcgtt
     1741 tgggtcgatc gatatcctcg tgaacggagc agcgttcttc aacaggaagg gcgtgctgga
     1801 catgtctctc gccgagtggg accggcagac gaaggtcatt ctgggcggca cgtttctgtt
     1861 caccaaatat gtcgccaggc gaatgatcgc gcgaggcacg ggtggtgccg tcatcaacat
     1921 cgcctcgacc gccggccatc agggcgagcc aggcaatatc gcctattcca cgtccaaggg
     1981 tggattgctc aacttcaccc ggtcggccgc gatggaactg gtcggccacg gcatccgggt
     2041 caacagcctg acgccgaccg cgaccgatcg atccgagtcc tacgatcgcg cggagcggtg
     2101 gggtcgcacg gtcactcgcc cggcagcgaa cgctggtggg ccaatggaca ggtttcgttc
     2161 gcgggtgcca atgcagcgcc tgccgctgcc aagcgactat ggtcgcgctg cggttttttt
     2221 ggcctctgac gacgcggcga tgatcaccgg gaccgacctg cgcgtcgatg ccggggccat
     2281 cgcgcggtac tgggcctggg atccggccgc cgacgtctga gcgccgccgc agcgacttgc
     2341 cgccgccggc tcgctggggg aacctgccga tcggccatct gaaacggata ccgcaaggcc
     2401 cgcccggcct gatcgccggc ggcgcgagca cgagggaggc aagccaatgc aggatttttc
     2461 tggcaagatc gccgtggtga ccggcggagg gtccggcatg ggccgcgagc tcgtgcgtct
     2521 gctggtcgcc gagggctgcg ccatagccat gtgcgatgtg tctcctcggg gcatggcgga
     2581 aacgcgacgt ttgtgtgaag cggccggcct gcctcagggt ctgcgtctca cgtcgcatgt
     2641 cgccgacgtt tcaaatgaaa ccgatgtgtt gcgtttccgt gacgaggttg cagcccaaca
     2701 cgcgaccgat cgcattcacc tgctgttcaa caacgcgggg atcagtggcg gcggcagcat
     2761 gatcgtcaat gagcaggcgg aatgggaacg tact
//
LOCUS       DATAVD010000257         3544 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_770338, whole genome shotgun sequence.
ACCESSION   DATAVD010000257 DATAVD010000000
VERSION     DATAVD010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3544
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_770338"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..452)
                     /locus_tag="VHX39_04685"
     CDS             complement(<1..452)
                     /locus_tag="VHX39_04685"
                     /inference="COORDINATES: protein motif:HMM:NF041278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CmcJ/NvfI family oxidoreductase"
                     /protein_id="HEX3990452.1"
                     /translation="MSAFAELRDRSDLGLPYVEAELHYLARMTERPRNYTYDPPPGVP
                     RSNTVHESHIVPIHDLRGIEAEISLDREGFELLGQVSKVRDFYDDDEVRGVYYPEAER
                     FIAEATGASRVFIFDHTVRRRVAGASDRVAGTPRQPATRVHVDHTARSG"
     gene            complement(503..736)
                     /locus_tag="VHX39_04690"
     CDS             complement(503..736)
                     /locus_tag="VHX39_04690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990453.1"
                     /translation="MMPIAVTNPLINCQCDQTHGTARISTAAQSLVRTLRVWRARIRE
                     RQAFPVLDERDLRDLRISRWDVEHELAKPFWRE"
     gene            917..1825
                     /locus_tag="VHX39_04695"
     CDS             917..1825
                     /locus_tag="VHX39_04695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GcvA"
                     /protein_id="HEX3990454.1"
                     /translation="MLLPSLNGLRAFEAAARHMSFTRAAAELNVTQTAISHQIRRLEE
                     QLGLTLFIRRNRTLELTREALDYLPSIRSAFADLHRATAKLRRNDREGRLTVSTTASL
                     ATKWLISRVAAFQDANPGIEVRISTSTHLVDFQREEVDIAVRYGHGVWPGLRADWLMA
                     EHIFPVCSPDLPNDARPLRTPEDLAHHTLLHTTVSREDWQLWLTAAGLPGSIATRRGM
                     TFDEGFMAIQAAMEGLGVALGRFHLVEADIAAGRLVAPFDTVLPQDAGYYVVAPEATA
                     ETAKIVRFRDWLITSATPGALASVPG"
     gene            1967..2377
                     /locus_tag="VHX39_04700"
     CDS             1967..2377
                     /locus_tag="VHX39_04700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990455.1"
                     /translation="MRLILFFVGTVFVFAVGVSQGFIPLPAQMAMAVRGFSGDPTHGK
                     TVNFNPVDGLNRHLPEILKGNSPEDPGLHVATVTKPPGSLRSVNGAAASAAAAAQNGF
                     ASGLVSQMQQNNLRAQATATDARNPAASHGALPH"
     gene            complement(2404..3186)
                     /locus_tag="VHX39_04705"
     CDS             complement(2404..3186)
                     /locus_tag="VHX39_04705"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3990456.1"
                     /translation="MPFNEAWVEADGFRIRYLTAGEGPPLVHLHGAGGLRLNQGHDLL
                     ARQFRVIAFEMPGFGTEENQRTRDMAELAATMAKAAQALGLQQFNLMGTSFGGRTALF
                     LALQSPELVRALVLEAPAAIRQAGMQPPSGSPEAVAQRLYAHPERMPPLPKVDPRVAM
                     QIAVLTQRLRGPDRDADLEARLPGLKVPVLGVFGTRDTVIPPDLGHLYKDLIPDAHLV
                     FVYDAGHAIMAERPDAFVEVVGDFLEREDAFVISRVKTVILP"
     gene            complement(3200..>3544)
                     /locus_tag="VHX39_04710"
     CDS             complement(3200..>3544)
                     /locus_tag="VHX39_04710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990457.1"
                     /translation="IVLAETDAEAQRAMEAYPARAPFALGNGIATALLELDSRNIAGE
                     ARPASINRALPINFIGGPDTVVEQIRRCRELTGAGIIDLGFNTPGTADPNAHMAALEL
                     FGHKVLPRIRDI"
BASE COUNT          637 a         1131 c         1117 g          659 t
ORIGIN      
        1 cccgaccgtg cagtatgatc gacgtgcacg cgcgttgccg gctggcgcgg cgtgcccgca
       61 acccgatcgc tcgcgccagc aacccgccgg cgaacggtgt gatcgaagat gaacacacgg
      121 ctcgcgccgg tcgcctcggc aatgaaccgc tcggcctcgg gataatagac gccacggact
      181 tcgtcgtcgt catagaagtc gcgcaccttg ctgacctggc caagcagttc gaagccctcg
      241 cgatcgagcg aaatctccgc ttcgatgccg cgcagatcat ggatcggcac aatatggctc
      301 tcatgcacgg tattcgaccg cggcacacct ggcggaggat catacgtgta gttccttggc
      361 cgctcggtca tccgggcgag gtagtgcagt tcggcctcga catacggtag gccgaggtcg
      421 gaacgatcac gcagttcggc aaaagcgctc atgtttgggt catccttgag tggtaacggt
      481 ggactgtggc tgggcgggaa attcactcgc gccagaacgg tttcgcgagt tcgtgttcga
      541 cgtcccagcg cgagatgcga agatcgcgta ggtcgcgttc gtcgaggacg ggaaacgcct
      601 ggcgctcccg gatccgcgcg cgccagacgc gtaatgtgcg aaccagcgac tgcgccgccg
      661 tactgatacg ggcggtgcca tgggtctggt cacactgaca atttatcagc ggattggtca
      721 cggcgatcgg catcatgggt ctccatcctg tgtcccgtcc cgctccaccc tgcgcgccgc
      781 gatagcgccg aaagttcgat tggcggcagc gggtcgagac gtgcgactgc tgggaaactg
      841 gacgttcagg gcgccggcga caaacgatgc tttgtcctgc tttacatgac aaaatttcat
      901 attatatcgg tccgccatgc tgctcccgtc gctgaacggc ctgcgcgcgt tcgaagccgc
      961 cgcccgacat atgagtttca cccgcgccgc ggccgaactg aacgtgaccc agaccgcgat
     1021 cagccatcag atccgccggt tggaggaaca gcttggcctc acgctgttca tccggcgcaa
     1081 ccggacgttg gagttgacgc gcgaggcgct cgactatttg ccgtccatcc gctcagcctt
     1141 cgccgacctg catcgggcga cggcgaagct gcgccgtaac gaccgcgagg ggcggctgac
     1201 cgtaagcacc accgcttcgc tggccaccaa atggctgatt tcccgggtgg cggcattcca
     1261 ggatgccaat ccggggattg aagtccggat ttcgacctcc acgcacctgg tcgatttcca
     1321 gcgtgaggag gtcgacatcg ccgtccgtta cggtcacggc gtctggcctg gcctgcgcgc
     1381 cgattggcta atggccgagc acatatttcc ggtctgcagc cccgacctgc ccaacgatgc
     1441 gcggccgctg cgcacgccgg aggatctggc gcatcacacg ctgctgcaca ccacggtgtc
     1501 gcgcgaggac tggcagctat ggctgaccgc cgctggtttg cccgggtcga ttgcgacccg
     1561 gcgcggcatg acgttcgacg agggcttcat ggcgattcag gccgcgatgg aaggcctcgg
     1621 cgttgcactg ggccggttcc acctggttga agcggatatc gcggcgggcc ggctggtcgc
     1681 gccgttcgac acggtgctgc cgcaggacgc cggctactac gtcgtcgcgc ccgaagcgac
     1741 cgcggaaacc gcaaaaatcg ttcgcttccg cgactggttg atcacctccg caacgccggg
     1801 cgcgctcgca tctgtgccgg gatgaatatg cactgcggtt cgcagttgca gtgcgtccgc
     1861 caatacagcg gcaggctgta tggtctcggg gttgccgcac gcgcgcagct tgccataggg
     1921 ttttcgtgag gattgcggaa agccgcccag ggccaggaga gtagccgtgc gccttatcct
     1981 ttttttcgtc gggactgtct ttgtgttcgc ggtcggtgtg tcacaagggt tcatcccatt
     2041 gcccgcgcaa atggcgatgg ccgtccgcgg atttagcggc gatcccacgc atggcaagac
     2101 ggtcaatttt aatccggtgg acggattaaa ccggcacctt ccagaaatcc tcaaaggcaa
     2161 ctcgccggag gacccaggcc ttcatgtcgc tacggtgacg aaaccacccg ggagtcttcg
     2221 aagcgtgaac ggtgccgccg ccagtgccgc agccgctgcc caaaacggtt tcgcgtcggg
     2281 tcttgtttca caaatgcagc aaaataacct tcgggcgcag gccacagcga ccgatgcgcg
     2341 caatccggca gcctcgcatg gcgcgctgcc gcattgatgc gaaatgcttg gttgaccggc
     2401 gcgctacggt aaaatcaccg ttttcacccg gctgatcaca aacgcatcct cgcgttcaag
     2461 aaaatcgccg acgacttcca cgaaggcatc cggccgctcg gccatgatcg cgtggccggc
     2521 gtcgtagaca aacaccagat gcgcgtccgg aatgagatcc ttgtacagat gacccagatc
     2581 cggcgggatc acggtatccc gcgtgccgaa cacgcccagt actggaactt tcagaccggg
     2641 caatcgcgcc tcgagatcgg cgtcgcgatc cggaccgcgc aaacgttgcg tcaggaccgc
     2701 gatctgcatt gcgacccggg gatcgacctt cggcagtggc ggcatccgct cgggatgcgc
     2761 gtacagccgc tgtgcgaccg cctcaggcga gccggacggt ggctgcatgc ccgcctggcg
     2821 gattgccgcc ggcgcctcca gcaccagcgc gcggaccagc tcgggtgact gcaaggccag
     2881 aaacagcgcc gtcctgccgc cgaatgaggt gcccatcagg ttaaactgct ggaggccaag
     2941 cgcctgcgcc gctttcgcca tcgtggccgc cagttcggcc atgtctcggg tccgttggtt
     3001 ctcctccgtg ccaaagcctg gcatttcgaa cgcaatgacg cggaactggc gagccagcaa
     3061 atcatggccc tggtttaacc gtaagccgcc ggcgccgtgg aggtgcacca acggcggccc
     3121 ctcgccggcc gtcagatatc ggatgcggaa gccgtccgcc tcaacccagg cttcgttgaa
     3181 tggcacggtc gttgctccct caaatatcgc gaatgcgtgg cagcactttg tggccgaaca
     3241 gttccagtgc cgccatgtgc gcgttcgggt cggcggtgcc cggggtattg aagcccagat
     3301 cgatgatgcc ggcgccggtc agttcgcgac agcggcggat ttgttccacg accgtgtcgg
     3361 gaccaccgat gaaattgatc ggcaacgcgc ggttgatact ggcaggccgt gcttcgccgg
     3421 caatgttgcg actgtccagc tccagtaacg cagtggcaat tccgttgccc aaagcaaacg
     3481 gtgcccgcgc gggataggct tccattgccc gttgcgcttc ggcatcggtc tcggcgagca
     3541 cgat
//
LOCUS       DATAVD010000258         1812 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2071853, whole genome shotgun sequence.
ACCESSION   DATAVD010000258 DATAVD010000000
VERSION     DATAVD010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1812
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2071853"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            198..1463
                     /locus_tag="VHX39_04715"
     CDS             198..1463
                     /locus_tag="VHX39_04715"
                     /inference="COORDINATES: protein motif:HMM:TIGR03506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein"
                     /protein_id="HEX3990458.1"
                     /translation="MSSTFSIALSALKAESQAINATGNNLANMNTTGFKGSAVDFKDL
                     FSEYLGTGGGSQYGLGVGIPITNAQYSQGSIANSTSPLSAAIQGNGFFVVNSSSGQQL
                     YTRDGNFVQDTNGVLRTETGEAVQGWTASSAGLDTSGVPGDIVLPVGSLLAANATQNF
                     SLNGNLDSSGTAGASTGTFSQPMQVVDSLGKTHNLTVTFTKTAGVNNAWTYDVTIPGG
                     DLASGTAGTQQSVLTGAPGALTFNSDGTLDTSGATSSSVAINGLADGAGDMSINWSLL
                     NSTGDATLTQYAEASAVSSSTQDGKQAAQLTTVAIQTGGQVIATYSDGRTQVAAQLAL
                     AAIANPDSLQNVGNNNLAVSASTATPAIGTEGTGGRGTIDGSALEGSNVDMATEFTNL
                     IVYQSGYQAASRVISTENTISQDLLNLIH"
BASE COUNT          359 a          581 c          549 g          323 t
ORIGIN      
        1 gaaaaatcag gatccttcgc aaccgatgga tgggaccacc ttcgtgacgc agctcgcgca
       61 gttcagcgac ctcgagcaga acctggcctc gcgtcaggac ctggacgcga tcgcgagcca
      121 gtacacaggt aactcttcga cgacgcccac caccccgaca agcggcagct aagcaaagaa
      181 aggaaaacgt aaagcccatg tcaagcactt tttcgatcgc cttatcggct ctgaaagcgg
      241 aatcgcaggc catcaacgcc accggcaaca acctggcgaa tatgaatacc accgggttca
      301 aaggctcggc ggtcgacttc aaagatttat tcagcgagta tctggggacg ggcgggggat
      361 ctcaatacgg cttgggcgtc ggtattccga tcaccaatgc gcagtattcc cagggatcga
      421 tcgccaacag cacgtcgccg ctctccgccg cgattcaggg aaacggcttc tttgtcgtca
      481 atagctcgtc cggccagcag ctctacacgc gcgatggcaa ctttgtgcag gacaccaacg
      541 gcgtattgag gaccgaaacc ggcgaagcgg tgcagggctg gacggcttct tccgccgggc
      601 tggacacctc gggtgtgccc ggcgatatcg tgctgccggt aggatccctg ctcgcggcca
      661 atgccactca gaatttctcc ctgaacggca atctcgattc gtccggcacg gccggcgcca
      721 gcacgggcac gttttcgcag cccatgcaag tggtggattc gctcggcaag acccacaacc
      781 tgacggttac gttcaccaag actgcgggcg tcaataacgc ctggacttac gacgtgacga
      841 ttccgggcgg cgatctggcc agcggcaccg ccggcaccca gcaatcggtg ctgaccggcg
      901 cgcccggcgc gctcaccttc aacagcgacg gtacgctcga caccagcgga gcaacgtcgt
      961 cgtcggtcgc catcaacggc ttggccgatg gcgccggcga catgagcatc aactggagtc
     1021 tgctgaactc gacgggcgac gcgactctca cccaatacgc ggaagcgtct gccgtgagct
     1081 cctcgacgca ggatggcaag caggcggcgc agttgacgac cgtggctatc caaacgggcg
     1141 gccaggtaat cgccacctac tcggatggcc ggacccaggt ggcggcgcaa ttggcgctgg
     1201 ccgccatcgc caacccggat tcgctgcaga acgtcggcaa taacaacctg gcggtcagcg
     1261 cctcgacggc cacgccggcg ataggcacgg agggaaccgg cggtcgcggc accatcgacg
     1321 gcagcgcgct cgaaggttcg aacgtggaca tggccaccga gttcacgaac ctcatcgtct
     1381 atcagagcgg ctatcaggcg gcttcgcgcg tcatcagcac ggagaacacc attagccagg
     1441 acttgttgaa tctgatccac taaaccgaag cccttcgcca cgttccgcca ttccttatgt
     1501 tgcagcagtt tcttgcggtc tttctggtgc tggccctgtt gtttgcggcc ttgtggctat
     1561 tgcggcgcaa gggtctcgcg agcctgccgc tgaggctcgc acggccgtcc gccgggcggc
     1621 gtcaaatgcg agtggtcgag cgtattccgc tttccgccca gcattcgctt cacctggttt
     1681 cggtttccgg ccgcatgctc gtgatcggcg tgtcgccagg tggctgcagt ccgctcgcca
     1741 gttggccgca ggcgtcgcag ggattgggac ccgaggaggc attgactcca tgaaccgcgg
     1801 cgtcagacgc ac
//
LOCUS       DATAVD010000259         3722 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_770373, whole genome shotgun sequence.
ACCESSION   DATAVD010000259 DATAVD010000000
VERSION     DATAVD010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3722
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_770373"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..1328)
                     /gene="wecC"
                     /locus_tag="VHX39_04720"
     CDS             complement(75..1328)
                     /gene="wecC"
                     /locus_tag="VHX39_04720"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: protein motif:HMM:NF008286.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0089714 - UDP-N-acetyl-D-mannosamine
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0009246 - enterobacterial common antigen
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HEX3990459.1"
                     /translation="MTSKVCVVGLGYIGLPTAAMLASRGYEVIGCDVNERAVAAINGG
                     RAHFQEPDLQMLLAASVQTGQLRAQLKPCEADYFILAVPTPFKENHKPDMKFVEAATD
                     AIAPYLAPGNTVILESTSPVGTTERMASRLQEARPDLVFPNYMESGDSSEANIRIAHC
                     PERVMPGQMVRELVSNDRIIGGMTDECAQSAMTLYESFVSAQLFTTDCRTAELVKLVE
                     NSFRDVNIAFANELSLICEHLGVDVWRAIELANKHPRVNILQPGAGVGGHCIAVDPLF
                     VIDAAPEQSRLIRTAREVNDRKPHWVAEHLMSLSSRFREPVIACYGITYKANVDDLRE
                     SPSVEIVRLLSERPDLRVLVVEPNITELPSCLQGLRNVTLVDADTARQNADIVALLVG
                     HRQFRRMDKKLLLSKVVLDVIGLMA"
     gene            complement(1325..2437)
                     /gene="wecB"
                     /locus_tag="VHX39_04725"
     CDS             complement(1325..2437)
                     /gene="wecB"
                     /locus_tag="VHX39_04725"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR00236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HEX3990460.1"
                     /translation="MTVFGTRPEGIKMMPVVREIRTRQSMQQIVCVTGQHREMLAQVF
                     AAFDERPDIDLDIMAPGQTLGDITAKVIVRMGEVIAREKPDLVLVHGDTTTAMAAALA
                     AFYARVPIGHVEAGLRSYDLNRPWPEEFNRVAIDSIADFMFAPTEQSAANLREEYNRR
                     GHITVTGNTGIDALLYVANSRTQEPWIAAEIVARYSFLNSPRRLILVTGHRRESFGAG
                     FQAMCDGLTSVASRGDVEVVYPVHLNPQVQGVVKDRLSGCANIHLIEPVEYLDMVLLM
                     QRSTLIITDSGGIQEEGPALGKPVLVTRDVTERPEALATDVVRLIGTDPALMRREVDA
                     LLDNPAEYARRARPFFPYGDGTAAKKIVDAIEGSRL"
     gene            complement(2483..>3722)
                     /locus_tag="VHX39_04730"
     CDS             complement(2483..>3722)
                     /locus_tag="VHX39_04730"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide biosynthesis tyrosine autokinase"
                     /protein_id="HEX3990461.1"
                     /translation="NYPGLIDAQRDKKALDARIAAEIGRIADSIRNDYETAVSRRDEL
                     KSMLGTRVDTTQDDTNSTGRVKLREAQRIVEANQAFYDAQLRRLREAELLKSRQDVEA
                     RILSPADAPTAPKFPKRSIFLILGAVVGLMGGVAVAGSRLLMENRFVTAAWTEDTLGL
                     PILGLLPLVRRREMAGIGRHSGIQEYLRAKPLSRFAESLRSLRAGLRNSTPIAPRIIH
                     VTSSVPGEGKSTVAAALATSAAIAGLRTVLVDLDIRNSSVSNLFNLQDSKGVVDVIKG
                     DSMIGTALQTFDELPLTVMAVGQSSRLSPDMIGSPRFGAMIQKLASDFDMVILDSPPI
                     LAVSDSVLIANVSDATMFVIQWRTTPKDIVRQGIKVLRSNGATLAGVVFNKMDLSKAP
                     QYEGAGYGAYYRGIDNYVSN"
BASE COUNT          789 a         1169 c         1033 g          731 t
ORIGIN      
        1 cagataaccc tcccctggtc agaccagagg agggtcaaaa cgcaccgtcc aacggtagtg
       61 cgaaacgctg acgatcaggc catcagcccg atcacatcca gcacaacctt gctgagcagc
      121 aacttcttat ccatccggcg gaactgccga tgtccaacca gcaacgcaac gatatcggcg
      181 ttctgtcgag cagtgtcggc gtcaaccaat gtcacgttcc gcaagccctg caggcaggac
      241 ggcagctcgg tgatattcgg ctcaacaacc agcacccgca gatccggccg ttccgacaaa
      301 agtcggacga tttcgaccga ggggctttcc cgcaaatcgt cgacattggc cttgtaagta
      361 ataccgtagc aggcaatcac cggctcgcgg aagcgtgacg acagcgacat cagatgttcg
      421 gccacccaat gtggcttgcg atcgttcact tcgcgcgcag tgcggatcag tcgtgactgc
      481 tccggcgccg catcgatcac gaacaacggg tctactgcga tgcaatggcc gcccacgccg
      541 gcaccgggtt gcagaatgtt cacccgcgga tgcttgttgg ccagctcaat ggcgcgccat
      601 acatcgacac ccaaatgttc gcagatcaac gacaattcat tggcgaaggc gatgttcacg
      661 tctcggaacg agttttcaac cagcttgacc agctcggcag tccggcagtc ggtggtgaac
      721 agttgcgcag agacgaagct ttcatacaac gtcatcgcac tttgagcaca ttcgtcggtc
      781 atcccaccga tgatgcggtc gttcgatacc agttcccgca ccatttgtcc gggcatcacc
      841 cgctcggggc aatgcgcgat gcggatattg gcctcgctgc tgtcgcctga ttccatgtaa
      901 ttcggaaaca ccaggtcagg cctcgcctct tgcaggcggg acgccatacg ttcggtggtg
      961 ccgaccggcg aggtcgactc aagaatgacc gtgttgcccg gcgccaaata cggcgcaatg
     1021 gcatcggtcg cggcctcgac aaacttcatg tcgggcttgt ggttctcctt gaacggggtc
     1081 ggcacggcca aaatgaaata atcggcctca cagggtttga gttgcgcccg cagctggccc
     1141 gtctgcaccg aggcagccag cagcatttgc agatcgggtt cctggaaatg cgcccgtcca
     1201 ccgttgatcg ctgcgacagc gcgctcattc acgtcgcagc caatgacctc atagccacgg
     1261 ctggccaaca tcgctgctgt cggcaggcca atatagccca atccgacaac acaaacttta
     1321 ctcgtcataa tctcgatcct tcaatcgcat cgacaatctt ttttgccgca gtaccgtcgc
     1381 catagggaaa aaacggccgc gcgcgacgtg catattcagc cggattgtcg agcaaggcat
     1441 cgacctcacg gcgcatcaac gccggatcgg tgccgatcag cctgaccacg tcggtggcca
     1501 gtgcctcggg tcgttcggtg acatcgcggg tgaccagcac cggcttgcct agtgccggcc
     1561 cctcttcctg gatgccgcca gagtccgtaa taatcagcgt cgaacgctgc atcagcagga
     1621 ccatatcgag atattcgacc ggctcaatca aatggatatt ggcacagccg gatagccggt
     1681 ctttcaccac gccctggacc tgcggattga ggtgcaccgg ataaaccacc tcgacatcgc
     1741 cgcgcgaggc gaccgaggtc agtccgtcac acatcgcctg aaacccggcg ccgaaacttt
     1801 cccgccgatg cccggttacc aaaatcaatc gtctgggcga attgaggaac gagtacctgg
     1861 cgacgatctc ggcagcgatc cagggctcct gtgtccggct gttcgcaacg tagagcaacg
     1921 catcgatccc ggtattgccg gtcactgtga tatggccacg ccgattgtat tcctcgcgca
     1981 ggttcgctgc ggactgctca gtcggtgcaa acatgaaatc ggcgatcgaa tcgattgcga
     2041 ctcgattgaa ttcctccggc cagggccgat tgaggtcgta cgaacgcaaa cccgcttcga
     2101 catggccgat tggaacacga gcgtaaaatg ccgccagagc cgcagccatc gcggttgtgg
     2161 tatcgccatg caccaacaca aggtccggct tttcgcgggc gatcacctcg cccatcctga
     2221 cgatgacctt ggccgtgata tcgcccagtg tctggcccgg tgccatgatg tcgagatcga
     2281 tatccggacg ctcgtcaaaa gcggcaaaca cctgggcgag catctcccgg tgctgaccgg
     2341 tgacacagac aatctgctgc atcgattgac gggtccggat ctcgcgcacc accggcatca
     2401 tcttgatgcc ttccggcctg gtgccaaaga cggtcataat gcgctgtttc aacatgtgcg
     2461 tatggccata atcatgacaa cttcaatttg acacatagtt gtcaattcct cgatagtaag
     2521 caccatagcc ggcgccctca tattgcggcg ccttcgacaa gtccatctta ttgaacacca
     2581 cgccggccaa ggttgccccg ttcgaccgca gcaccttgat accttgcctg acaatatctt
     2641 tcggagtggt tctccattga atgacgaaca ttgtggcatc ggagacattg gcgatcagca
     2701 cggagtcgga gaccgccagg atgggcgggc tgtccagaat taccatgtcg aagtcactgg
     2761 ccagcttctg gatcatcgcg ccaaagcgcg gcgagccgat catgtccggg cttaaccgtg
     2821 aggactgacc aaccgccata accgtcagcg gcagctcgtc aaaggtctgc aacgcggtac
     2881 cgatcatcga atcgcccttg atgacgtcga cgacaccttt tgagtcctgc aaattgaaca
     2941 ggttcgacac cgaggaattg cgaatatcga gatcgaccag aaccgtgcgc aggccagcga
     3001 tcgcggcaga cgtcgccagc gccgccgcca cggtcgactt gccctcgccc ggcaccgagg
     3061 aggtgacgtg gatgatccgc ggtgcgatcg gtgtcgaatt acgcaatccg gcgcgcagcg
     3121 agcgcagcga ttcagcgaag cgcgacaatg gcttcgcccg cagatactcc tggatgcccg
     3181 agtgacggcc gatccctgcc atttcgcgcc ggcgcaccag cggcagcaat ccgaggatcg
     3241 gcagtccaag ggtatcctcg gtccaggcgg cggtgacgaa acggttttcc atcagcaacc
     3301 gcgagccggc aacggctact ccgcccatta aaccgaccac tgcacccagt atcaggaaaa
     3361 tactgcgttt cggaaacttc ggagcagtcg gcgcatccgc cggcgacagg atccgtgctt
     3421 ccacatcctg ccgggacttc aacagctcgg cttcccgcag ccggcgcagc tgtgcgtcat
     3481 agaatgcctg gttggcttcc acgatccgtt gcgcctcacg caatttcacc cggcccgtac
     3541 tgttcgtatc gtcctgcgtg gtatcgaccc gcgtgcccaa catcgacttg agttcgtcgc
     3601 gccgggagac cgccgtctcg taatcgttgc ggatgctgtc ggcgatgcgg ccgatctcgg
     3661 ctgcgattct ggcgtccagc gctttcttgt cgcgctgggc atcgatgagc ccaggatagt
     3721 tg
//
LOCUS       DATAVD010000260         2989 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3188287, whole genome shotgun sequence.
ACCESSION   DATAVD010000260 DATAVD010000000
VERSION     DATAVD010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2989)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2989)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2989
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3188287"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..576
                     /locus_tag="VHX39_04735"
     CDS             133..576
                     /locus_tag="VHX39_04735"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX3990462.1"
                     /translation="MASTIDERLRHLEDLEEIRALLTAYGNLLDRRDLAGYAALFSRQ
                     GKWTGPYIGAAEGPAAIQALLTEKLDTLAGTEREGAHHIMSNMTIAIGTDTASAWSRW
                     TYIIPAEQRKPSLALSGHYDDVLVREDGRWKFKSRVVSGDLPGVT"
     gene            597..1052
                     /locus_tag="VHX39_04740"
     CDS             597..1052
                     /locus_tag="VHX39_04740"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX3990463.1"
                     /translation="MQDLQAKLRGLSDIEDIRRLLVEYGRTLDRRDFRAYSQLFARDG
                     AWIGVGTIGSAQGPAAIQAFMEKNIGVTPVRCNHLMTNMLVDVDEDSGTAWSRWTLID
                     ADPGDKPILIYSGHYEDVLTRENGVWKFQTRKAFVDIPDVSNTQAPAPP"
     gene            complement(1071..2519)
                     /locus_tag="VHX39_04745"
     CDS             complement(1071..2519)
                     /locus_tag="VHX39_04745"
                     /inference="COORDINATES: protein motif:HMM:NF015043.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carotenoid oxygenase family protein"
                     /protein_id="HEX3990464.1"
                     /translation="MTLRFPDTVGFSGHDAPSRIEADIFDLEVHGQLPPDLAGTWYRC
                     GPDPQYPPLMGDDVYINGDGMMSMFRFADGHVDYKSRYVVTERFLAERKARRSLFGLY
                     RNSFTDHPSVAGVNRTTANTTAIWHAGRLLALKEDSRPYEIDPDTLATRGVYDWGGHL
                     RTKTVSAHPKIDPHTGELLFYGYESSGDGSRDMAFCVADRSGKLVKEEWFEAPYAAMV
                     HDFAVTEKYAIFPIFPAITDLERMRAGGPHWMTDLSRKSYIGVLPRDGTAQDLRWFSR
                     PGGQSFHTINAYSEGTTVHLDLLLSEINPFPYVPDVSGAPYDPQKAAPIPTRFSMDLA
                     GGDATIQERPLGPISGDVPRMDERFVGRDYRYAYMGMVDPTRAMVKSGPIGVGFNMAG
                     RLDVTTGETHTWFGDDTDGFQEPIFVPSGAQEGQGYLLAIVERHAEHRADVGVFDAAA
                     VHNGPLAIVRLPMRLRMAFHGCWVPASERSAR"
     gene            complement(2521..>2989)
                     /locus_tag="VHX39_04750"
     CDS             complement(2521..>2989)
                     /locus_tag="VHX39_04750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990465.1"
                     /translation="SSPLYILSFMTPNAGVAAILLTLASICIFLYYTPTQVVLQNMAQ
                     PRMRATVAFVFFLVVGLVGVGVGPALVGLFSDIFAAHAFSLGDYAARCPGGVTLLPSD
                     HLNEICLAASSAGLRSALICVACVGFWAALHFLLAARTIRQDMSSVTATTGVV"
BASE COUNT          601 a          920 c          936 g          532 t
ORIGIN      
        1 gaagatcccc ggggcccgga cgtgctcgtg gaggcgcaac cggtatggcc caacacgcgc
       61 aacgttccct tccactacaa gcatccggtc accggaaaac cgttcgcgga atgacgcacg
      121 cggagagaca ccatggcgag cactatcgac gagcggttgc ggcatctcga ggatctcgag
      181 gagatcaggg ctctgctcac tgcctacgga aacctgctgg accgtcgcga tcttgccggc
      241 tacgcagcgc tttttagccg gcaaggcaaa tggacgggcc cttacattgg cgcggccgag
      301 ggacccgcgg cgattcaggc cctgttgacg gagaagctcg acacgctggc cgggacggag
      361 cgcgagggag cgcaccacat catgtccaac atgacgatcg cgatcggaac ggataccgcg
      421 agcgcgtggt cgcgctggac ctacatcatt ccggcagagc agcgtaagcc cagcctggcg
      481 ctcagtggcc attatgacga cgtcctggtt cgcgaggacg gtcggtggaa attcaaatca
      541 agggtggtct ccggcgatct gccgggcgtc acctgaagca gtggaggaag tcggttatgc
      601 aagatcttca agcgaagttg cgcggtttga gcgatatcga ggacatccgg cggctgctcg
      661 ttgaatacgg gcgtaccctg gatcggcggg acttcagggc ctattcgcaa ctgttcgcgc
      721 gtgacggcgc ctggatcggg gtagggacca taggttccgc gcaagggccc gcggccatcc
      781 aggcctttat ggaaaagaac atcggcgtga cgcccgttcg ctgcaaccat ctcatgacca
      841 acatgctggt cgacgttgac gaggattccg gcacggcctg gtcccggtgg acgttgatcg
      901 atgccgaccc gggcgacaag ccgattctga tttacagtgg ccattacgag gacgtgctta
      961 ctcgtgagaa cggcgtttgg aagttccaga cgagaaaggc cttcgtcgac attccagacg
     1021 tgtcaaatac tcaggccccg gcgccgccat agggccgccc tccgcgatct tcagcgggca
     1081 cttcgttcgc ttgcgggaac ccaacacccg tggaacgcca tccgcaagcg cattggcaga
     1141 cgcacgatcg ccagcggccc gttgtggacc gccgcggcat cgaacacgcc tacatccgct
     1201 cggtgttcgg cgtgccgctc gactatcgcc agcaggtagc cctgcccttc ttgcgcgcct
     1261 gacggcacga atatcggttc ctgaaagcca tcggtatcgt ccccgaacca ggtgtgcgtc
     1321 tcgccggtcg tcacgtcgag gcgccccgcc atgttgaatc cgacaccgat cggtcctgac
     1381 ttcaccatcg cgcgcgttgg gtcaaccatg cccatgtagg catagcgata gtcgcggccg
     1441 acgaaacgtt cgtccattcg cgggacatct ccggagatag ggccgagcgg ccgctcctgg
     1501 atcgtcgcat cgcccccggc aaggtccatg ctgaagcggg tcggaatcgg cgccgctttt
     1561 tgcgggtcgt agggagcacc ggagacgtcg gggacatacg gaaaggggtt gatttccgag
     1621 agcagcaggt cgagatggac tgtcgtgcct tcagagtacg cgttgatggt gtggaagctt
     1681 tgccctcccg ggcggctgaa ccagcgcagg tcctgcgccg tcccgtcgcg aggcaacacc
     1741 ccgatataac ttttccggct gaggtccgtc atccaatgag ggcctcctgc gcgcattctt
     1801 tccaggtcgg tgatcgcggg aaaaatcggg aaaatcgcat acttctcggt gaccgcgaaa
     1861 tcgtggacca tcgccgcata gggcgcctcg aaccactcct ctttcaccag cttaccgcta
     1921 cggtccgcaa cgcagaacgc catgtcgcga ctgccgtcgc cgctcgactc gtatccgtag
     1981 aacaacagct cgccggtgtg cggatcgatc ttagggtggg cggacactgt cttcgtccgc
     2041 aggtgcccgc cccagtcgta tacaccccgg gtcgccagcg tatcgggatc gatctcgtac
     2101 gggcgactat cctctttcaa cgccaagagg cgtcccgcat gccagatcgc ggtggtgttg
     2161 gcggttgtgc ggttgacgcc ggctacactc gggtgatcgg tgaaggagtt ccggtacaga
     2221 ccgaaaagtg agcgccgtgc cttgcgctcg gccaggaagc gctcggtgac cacatagcgg
     2281 ctcttgtaat ccacatgacc gtccgcgaaa cgaaacatcg acatcatgcc atcgccattg
     2341 atgtagacat cgtcgcccat gagcggcgga tactgggggt ccggtccgca gcgataccac
     2401 gtgcccgcaa gatccggcgg cagctgcccg tgcacttcga ggtcgaaaat gtccgcctcg
     2461 atccgtgagg gagcgtcgtg cccgctgaac ccgaccgtgt ctggaaaccg aagggtcatg
     2521 tcaaacaact cccgtcgttg cggttaccga cgacatgtcc tggcggatgg tgcgagcggc
     2581 aagcaagaaa tgcagtgcgg cccagaagcc gacgcaggcc acgcagatca aagcacttcg
     2641 caagccggca ctcgatgcgg cgagacagat ttcgttcagg tgatccgacg ggagcagcgt
     2701 cacgccacca gggcaacgcg cggcgtagtc tccgagtgag aacgcgtgcg ctgcaaaaat
     2761 atcgctgaat aaacccacca gtgccggtcc cactccgaca cccaccagtc ccaccaccag
     2821 gaagaacacg aacgccaccg tcgcgcgcat gcgtggttgc gccatgttct gcagcacgac
     2881 ctgcgtcggg gtgtaataaa gaaaaatgca gatgctggcc agcgtcagga ggatcgcggc
     2941 gacaccggcg ttgggggtca tgaaggacag gatgtagagc ggtgagctc
//
LOCUS       DATAVD010000261         1568 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1326910, whole genome shotgun sequence.
ACCESSION   DATAVD010000261 DATAVD010000000
VERSION     DATAVD010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1326910"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..296
                     /locus_tag="VHX39_04755"
     CDS             <1..296
                     /locus_tag="VHX39_04755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990466.1"
                     /translation="AEAWVYDPDDERRRAALEIGKQGDSNDPLTWLALGAGWSGGALL
                     AHPQHLVPVPPYMTPRAVRIAILLSARIFEPEQYTARMQACIVDGIKLAERGL"
     gene            491..>1568
                     /gene="tagH"
                     /locus_tag="VHX39_04760"
     CDS             491..>1568
                     /gene="tagH"
                     /locus_tag="VHX39_04760"
                     /inference="COORDINATES: protein motif:HMM:TIGR03354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system-associated FHA domain
                     protein TagH"
                     /protein_id="HEX3990467.1"
                     /translation="MTTLPDGGPLSVSIKGKRGLDIGRDQYLDWTLPDSSRFISGKHC
                     EVRWHDGGYWLHDVSTNGTFMNGAESRLKAPHRLRNGDRFVIGQYIIAATMDEELAEP
                     GDAAPRPPSRDDNLWDGVPDAADPIDPRQLKGPHDAVPVRPDFLDWAVDVPVPTMHSA
                     PSPAAPVSSIQRMPIATEHDSWAEGPPPAPAPQPEVIPVPTPRRPHTGEAKQPWTAPE
                     STPPVASQRNVDADATAKFTQLLARGAGLPDDAFAGRDPGELAEQLGRLMKLATDNMK
                     QLLEARQQAKRLARSPNQTTVQAINNNPLKFAPTAEDALRIMFGSQNRSYLDSERAFA
                     QGFDDLKKHQIKTYVAMQQAVTMLM"
BASE COUNT          332 a          496 c          465 g          275 t
ORIGIN      
        1 ccgctgaagc gtgggtgtat gatcccgatg acgaacgccg gcgggccgcg cttgaaatcg
       61 gcaagcaggg cgacagcaac gaccccttga cctggctcgc cctgggcgcc ggatggtcgg
      121 gcggcgcact cctggcgcat cctcagcacc tggtcccggt gccgccctat atgaccccga
      181 gggcagtgcg tatcgccatc ttgctaagcg cccgaatctt cgagccggaa cagtacaccg
      241 cgcggatgca agcatgtata gtggacggta ttaaactggc cgagagagga ttgtgacgtc
      301 tcgtatgctc gggtgccggc tgaataaacg tcattcgata ctccaatcca cgggatcgcc
      361 gatattgctt gaacaaggcc tgactgaaac taagccgaag tgcaaatgtg aaagttaagc
      421 gctacgcctc aaagcatcga ccgatttcaa tagatcgacc gcaatgaccc tgacgctgcg
      481 aatagagaac ttgacgaccc tgcctgacgg cggcccgctg agtgtttcga tcaagggcaa
      541 gcgtggtctc gatataggtc gcgatcagta tctcgattgg accctgcctg attccagccg
      601 gttcatctcg ggcaagcatt gcgaggtgcg ctggcacgat ggcggctatt ggctccacga
      661 tgtctcgacc aacggcacgt tcatgaacgg tgctgaaagt cgcctcaagg ccccgcatcg
      721 attgcgtaac ggcgatcgat ttgtcatcgg tcaatacatc atcgccgcga cgatggacga
      781 ggaactcgcc gaacccggcg atgcagcgcc gcgcccgcca tcccgcgatg acaacctgtg
      841 ggacggggtg ccggacgcag ccgatccgat tgacccgcgg cagctgaagg ggccgcatga
      901 tgcggttcca gtccgacctg attttctcga ttgggcggtc gacgtgcccg taccgaccat
      961 gcattctgca ccgtcgccgg cagcccccgt gtcctccatc cagaggatgc ccatcgccac
     1021 cgaacacgat agttgggccg agggtccgcc gccggcaccc gctccgcagc ccgaggtcat
     1081 ccccgtgccg accccgcggc gtccgcacac cggtgaggcg aagcaaccct ggaccgctcc
     1141 ggaatcgact ccgccggtgg cctcgcagcg caacgttgac gcggatgcaa cggcgaaatt
     1201 tacccagctt ttggcgcgcg gcgcgggcct gccggacgat gcgttcgcgg ggcgcgatcc
     1261 cggcgaactg gccgagcaat tgggccggct gatgaaactc gccaccgaca atatgaaaca
     1321 attgctcgag gcccgtcagc aagccaaacg gctggcgcgc agtcccaacc agacgacggt
     1381 tcaggcgatc aacaataacc cgctcaaatt cgcaccaacg gcggaagatg cccttcgcat
     1441 catgttcggc tcccagaacc ggagttatct cgactcagaa cgagcgttcg cccagggttt
     1501 cgacgatttg aagaaacatc aaatcaagac ctatgtggcg atgcagcagg ccgtcacgat
     1561 gctcatga
//
LOCUS       DATAVD010000262         4684 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2257785, whole genome shotgun sequence.
ACCESSION   DATAVD010000262 DATAVD010000000
VERSION     DATAVD010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4684
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2257785"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1870
                     /locus_tag="VHX39_04765"
     CDS             <1..1870
                     /locus_tag="VHX39_04765"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEX3990468.1"
                     /translation="VRAFFLIMVASFVLWGVGDMLRVVGTSTWVAKVGNTTIEAPQLE
                     AEYRRDLSVMTRNLPSGQEPSAELRREVGQQALQSLVGQAAMNQELRSLHIVVSDSVL
                     VATTHKLPAFLDANGQFDKARLDAVLRSQNLTEAGFIELMRGEIAQRQLLDAVAAGAQ
                     VPNAEAAAIYAARFEKRSADMAQFPIASVPEPAVPDEATERRWYDNHPDLYATPEYRR
                     ITVIVLSPATLASEVTVTDQDVQAAYDAHKAEYTTIAKRSAQVISITDATKATALADQ
                     WRAGADWAAMQAAAQTDGAAAIEQNDATQTQFPDPDLAKAVFSAPVDTVPAPIKGALG
                     WFVIRVTHAVQGGVESFDQVKDRLRQRLVTEKALGLVYDKANKIDGELGNGTSLAALP
                     PDPGVANITVTLDQNGDTPEDRPAALPGEAEIRSAIPAAAFAAQKGDPPQLTEVQTPS
                     VGGSGYYALSVDDITPAGEKPFDAVRDNVVQDWRADQRRHSAETAAAAMLQAVKAGKP
                     FSDAARDAGILPTLSPLVTRNQPDPAMPRQVQQVLFSLKKGEPTMVETPEGFLVATAV
                     EIVAPDPATDPTRFDQLRAAESRTLADDMGAAFSEALRLRANPSINQTNVDQIVQP"
     gene            1887..3416
                     /gene="trpE"
                     /locus_tag="VHX39_04770"
     CDS             1887..3416
                     /gene="trpE"
                     /locus_tag="VHX39_04770"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HEX3990469.1"
                     /translation="MNVTLAPGYAAFRSAYDAGRGSLVWRRGVADLETPVAAYLKLAH
                     GRPNAFLLESVEGGTTRGRYSVIGMAPDLIWRCQDGKAAINRSVHSAPHAFVPEARPP
                     LESLRALINETRLDVPSNLPPMAGGLVGYLGYDMVRQMEQLPAKNVDVIGVPEGLMTR
                     PSLFAIFDNVNDELTLVAPVYPSPEVSADAAWAAAQARLDDAETALERPLPRQPPPVM
                     LPDPPEPVSNFTHDGFLAAVARCKDYVMAGDTFQIVISQRFAVPFALPPFALYRSLRR
                     VNPAPFMVYLDFGTFSVVASSPEVLVRLRDGTVTIRPLAGTRRRGVTREEDLALEQQL
                     LADPKERAEHLMLLDLGRNDVGRVAALGSVKVTEQFVIERFSHVMHISSNVEGRLAEG
                     LDALDALIGGFPAGTLSGAPKVRAMQIIEELEPDRRGIYAGCIGYFAANGTMDTCIAL
                     RTALVKDGTMYVQAGAGIVADSDPESEFEECRQKALALVRSAEEAVRFAAGKGGGNNA
                     G"
     gene            3413..4561
                     /locus_tag="VHX39_04775"
     CDS             3413..4561
                     /locus_tag="VHX39_04775"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX3990470.1"
                     /translation="MIAGRTRDEHLFGPGPKRILALDGGGVRGIISLAYLERLEAILR
                     ERFGPDTVLADYFDLIGGASTGAIIATGLALGLPVQRLIATYLELADKGFRRSSRFAF
                     LAPKFQAGALLEQIRAHVGDVTLGSARVKTGLAIIAKRIDTGSMWVFHNNPRGRWFDV
                     SGSDPDAVPNKDLKLTQLIRASTAAPSYFAPESIEIARGVSGTFVDGAVSPHGNPGLL
                     LFLLATLGGYGFRWPTGSGQLLLASVGTGHHPMTPSRMPPKRAPPLLLAALALKSVMD
                     DCNWLNQTLLQYLGQSPQPWHIDGEIGDLSGDQLGSAPALHYLRYDMVYSSHWFDGEI
                     GVRLEQRELDGLTRFDEPAISPRLLELARLAAGKQIAEAHLPVGFDLR"
BASE COUNT          826 a         1469 c         1503 g          886 t
ORIGIN      
        1 cgtccgcgcc ttcttcctga tcatggtagc ctccttcgtc ctctggggtg tcggcgacat
       61 gttgcgcgtt gtcggcacct ccacctgggt tgccaaggtc ggcaacacga cgatcgaagc
      121 gccccagttg gaggccgagt atcgccgcga cctgtccgtc atgacccgca acctgccgtc
      181 cggccaggag ccctcggccg agctgcgccg cgaggttggg cagcaggcat tacagagcct
      241 ggtcggccag gccgcgatga accaggaact gcgcagcctg catatcgtgg tgtccgactc
      301 tgtgctggtc gcgacgaccc acaagctccc cgccttcctg gatgccaacg gccagttcga
      361 caaagccagg ttggatgcgg tgttgcgtag ccagaacctg accgaagccg gcttcattga
      421 gttgatgcgt ggcgagatcg cgcagcgcca actgctggac gctgttgcgg ctggcgcgca
      481 ggtccccaac gccgaagctg cggcaatcta tgcagcaagg ttcgaaaagc gctctgcgga
      541 catggcccag tttccgatcg ccagtgtgcc tgagcccgcg gtgccggatg aggcaaccga
      601 gcggcgctgg tacgataacc accccgatct ttacgccaca ccggaatacc ggcgcatcac
      661 ggtgattgtg ctctcgcctg cgacccttgc atcggaagtg accgtcacag accaggacgt
      721 tcaggcggcg tacgacgcgc ataaggccga atatacgacc atcgcaaaac gctcggcaca
      781 ggtgatttcc atcaccgacg caaccaaggc gacagctttg gcagatcaat ggcgcgccgg
      841 cgccgactgg gctgcgatgc aggcggcagc gcaaaccgac ggggccgcag cgatcgagca
      901 gaatgatgca acccaaaccc agttccctga tccggatctg gccaaagccg tgttcagtgc
      961 gccggtcgac acggtgcctg cgccaatcaa gggagcgctc ggctggttcg tcatccgggt
     1021 cacccacgcc gtgcaaggcg gtgtggaatc gttcgaccag gtaaaagatc ggttgcggca
     1081 acgtctggtg acggaaaagg cgcttggcct ggtttacgac aaagccaaca agatcgacgg
     1141 cgagcttggc aacggcacct cgctggccgc tttaccgccc gatcctggcg tggcgaacat
     1201 tacggttact ctggaccaga acggcgatac gcccgaagac cgaccggcgg cgctgccggg
     1261 tgaggcagag atccgttcgg ccatccccgc ggctgcattc gctgcacaaa agggtgatcc
     1321 gccgcaattg accgaggtgc agaccccgtc cgttggtggt tccggctact acgccttgtc
     1381 ggtggacgac atcacgcccg ccggtgaaaa gccgttcgat gccgttcggg acaacgtggt
     1441 tcaggactgg cgcgccgatc aacgccgcca ctcggcggaa accgcagcgg ctgcgatgct
     1501 gcaggcggtc aaagccggca agcccttctc cgatgccgcg cgcgatgcgg gcatattgcc
     1561 aaccctgtcg ccgctggtaa cccgcaacca gcccgatccg gcaatgccgc gccaggtgca
     1621 gcaggtgctg ttcagcctga aaaaaggcga gcccaccatg gtggaaacgc cggagggctt
     1681 cctggtcgcg acagccgtgg aaatcgtcgc acccgacccc gccaccgacc ccacgcgctt
     1741 tgatcagctt cgcgcggcgg aatcgcgcac cctggcggat gacatgggtg cggccttctc
     1801 cgaggcgttg cgcctgcgcg ccaacccgag catcaatcag accaacgtcg atcaaatcgt
     1861 gcaaccgtaa gccattgaga ccaggtatga acgtcactct cgcgccgggc tatgccgctt
     1921 ttcgttccgc ctacgatgcc ggacgaggca gcctggtctg gcgtcgcggc gtcgccgatc
     1981 tggaaacccc ggtcgcggct tatttgaagc tggcgcacgg caggccgaat gcgtttctgc
     2041 tggaaagcgt cgagggcggc accacccgcg gccgatattc cgtgatcggc atggcgccgg
     2101 acctgatctg gcgctgtcag gatggcaagg ctgcgatcaa tcgctccgtc cactcggcgc
     2161 cgcacgcctt tgtgccggag gcacggccgc ctctggaaag cctgcgcgca ctgatcaatg
     2221 aaacccggct cgatgtgccg tcgaacctac cgccgatggc gggagggttg gtcggttacc
     2281 tcggttacga catggttcgg caaatggaac agctgccggc gaagaatgtc gacgtgatcg
     2341 gcgtgccgga agggttgatg acccggccgt cgctgttcgc cattttcgac aacgtcaacg
     2401 acgaactgac tttggttgcg ccagtttacc catcgccgga ggtttcagcg gacgctgcct
     2461 gggctgcggc tcaggcgcgc ctggacgatg ccgagacagc gttggaacgg ccgctgcccc
     2521 gccagccgcc gcctgtgatg ttgcccgacc cgccggaacc ggtgtcgaat tttacccatg
     2581 atgggttttt ggctgcggta gcgcgatgca aggactacgt catggccggc gataccttcc
     2641 agatcgtcat cagccagcgg tttgccgtgc ccttcgcact gccgccgttt gcgctgtatc
     2701 gctcgttgcg gcgggtcaat ccggcaccat tcatggttta tctcgacttt ggcacgtttt
     2761 ccgtggtcgc ttcctcgccc gaggtgctgg tgcggttgcg cgacggcacc gtgacgatcc
     2821 ggccgctggc cggcaccagg cggcgcgggg tgacgcgcga ggaggacctc gcactggaac
     2881 agcaactgct ggccgatccc aaggaacgcg ccgagcattt gatgttgctc gatctcggtc
     2941 gtaacgatgt tgggcgagtg gcggcgctgg gttccgttaa ggtgaccgag cagtttgtca
     3001 tcgagcggtt cagccatgtc atgcatatct catccaatgt ggaaggccgg ctggccgagg
     3061 ggctggacgc attggacgcg ttgatcggtg ggttcccggc cggaaccctg tctggtgcgc
     3121 caaaagtccg cgccatgcag atcatcgagg agctggaacc ggaccggcgc gggatttatg
     3181 ccggttgcat tggttatttt gccgccaatg gcacgatgga cacctgtatc gcgctgcgca
     3241 ccgcactggt gaaggacggc acgatgtatg tgcaggccgg ggcagggatc gtcgctgact
     3301 ccgaccctga atccgagttc gaggagtgcc ggcaaaaggc cctcgccctg gtgcgctcag
     3361 ccgaggaggc ggtgcggttt gccgcaggca aaggcggggg gaacaacgcg gggtgatcgc
     3421 cggccgaacc cgcgacgagc atttgtttgg tcctgggccg aaacggatcc tcgcgctgga
     3481 cggcggcggg gttcggggca ttatcagcct cgcctacctg gaacggttgg aggcaatcct
     3541 gcgcgagcgg ttcggtccgg ataccgttct cgccgattat ttcgatttga tcggcggcgc
     3601 ctcgaccgga gcaatcatcg ccaccggact tgctttgggc ctgccggtcc agcggttgat
     3661 cgccacttat ctcgagcttg ccgataaagg ctttcgccgg tcgtcgcgtt tcgcgttttt
     3721 ggcgccaaaa ttccaggccg gcgcgctgct ggagcaaatc cgcgctcatg tcggcgacgt
     3781 aacattgggt tcagccaggg taaagaccgg gctggcgatc atcgccaagc ggatcgacac
     3841 cggcagcatg tgggtgtttc acaacaaccc gcgtggccgc tggttcgatg tgtccgggtc
     3901 cgatccggat gcggtgccga acaaggacct gaagctcacg caattgatcc gcgccagcac
     3961 tgcggcacca tcgtattttg cgcccgaatc gatcgagatc gcgcgcggag tttccggcac
     4021 tttcgttgac ggcgcggttt ctccgcacgg caatcctggg cttttgctgt tcctgctcgc
     4081 gacgcttggg ggatatggct tccgctggcc caccggctcc gggcaattgt tgctggcctc
     4141 ggttggaacc gggcatcacc cgatgacccc ttcgcgcatg ccgccgaaac gcgcgccgcc
     4201 gctattgctc gctgccctgg cactgaagtc ggtgatggac gactgcaatt ggctcaatca
     4261 gacgctgttg caataccttg gacaatcgcc tcagccctgg cacatcgacg gcgagatcgg
     4321 cgatctttcc ggcgatcaac tgggttccgc gccggcgctc cactatcttc gctacgacat
     4381 ggtgtattcg tcgcattggt tcgatggcga aatcggcgtg cggctggagc agcgggaact
     4441 ggacgggttg acccgattcg acgaaccggc gatttcgccg cgcttgctgg aactggcgcg
     4501 gttggccgca ggcaagcaaa tcgccgaggc gcatctgcca gtgggattcg atcttcgctg
     4561 acggtgggcc gaagccggat ttcatgggtt atgggctccc aatcgcggcc cacccgccta
     4621 tctatccact gatgcaagcg cacgacgtcc tgacccagac acctgccggt ttgtattgtc
     4681 ccgc
//
LOCUS       DATAVD010000263         1769 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_210375, whole genome shotgun sequence.
ACCESSION   DATAVD010000263 DATAVD010000000
VERSION     DATAVD010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210375"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            132..1382
                     /locus_tag="VHX39_04780"
     CDS             132..1382
                     /locus_tag="VHX39_04780"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX3990471.1"
                     /translation="MSWLSRLGCGLLPFAMLAGAAAQAAEPFTFGMSISQTGGLAPGA
                     RAVLLGMQIWIEDTNAKGGLLGRPVKLLTYDDQSNPALVPGIVAKLLDVDKVDFLLGG
                     QGTNLIAPLMPAAMQRNLTVIGMFGLDVNSEFHYPNYFSIIPTGGAHPKEALAEPFFA
                     TAATMNPGPQTIALVGADAEFARNAVDGARTLAKRAGLKIVYDKTYPPTTQDYAPIVR
                     AIQATSPDLVFVGSYPTDTVGMIRAVNEVGLNVKMFGGAMVGSQLGSLKSQMGPMLNG
                     LVNYDFWLPVGAYATPEAKAFIAKYQSRVGDSGADTLGYYQPPFAYADLQVIGEAIRE
                     TGGTDQAKLADYLRSHTFHTLVGDIKFGPNGEWTEPRVLEVQFHDVKGHDLDQFRTMD
                     TQTVLYPPELKTGTVRYPYSSNHQ"
     gene            complement(1439..>1769)
                     /locus_tag="VHX39_04785"
     CDS             complement(1439..>1769)
                     /locus_tag="VHX39_04785"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX3990472.1"
                     /translation="TQYMMANLGEPISLADIATATGLSRMHFAAQFRVATGMRPHEYL
                     LQRRIERAQELLMSSQLPLVDIAFDVGFKTQAHFTTVFTRLVGETPNVWRRSNREASS
                     SAILEAA"
BASE COUNT          387 a          538 c          501 g          343 t
ORIGIN      
        1 caccgcaaca attctaccat cacatgcgaa ctcaacgcgg gtccggcgct acttgacagc
       61 gcgtggccga gcaaccagcg tatagcgcat catagaaaat aatagaccaa cacaacgagg
      121 aaacgagcac gatgtcctgg ctatcacgtc tcggctgcgg actgttgcca tttgccatgc
      181 tggcaggcgc cgccgcacag gcagccgagc ccttcacctt cgggatgagc atcagccaga
      241 ccggcggatt ggcccccggc gccagggctg tgctattggg catgcaaatc tggatcgagg
      301 ataccaatgc gaaaggcggg ctgcttggcc ggccggtgaa actgctcacc tatgacgacc
      361 aatccaaccc ggcactcgtg ccgggcatcg ttgccaagtt gctggacgtc gacaaggtcg
      421 actttctcct gggcggccag ggcacaaacc tgatcgcacc gctcatgccc gcggcaatgc
      481 aacgcaatct gaccgtcatc ggaatgttcg gcctggacgt aaatagtgag tttcactatc
      541 cgaattattt ctcgatcatt cccaccggcg gagcccatcc caaggaagcg ttggcggaac
      601 cgttcttcgc gacagccgcc acgatgaacc ctgggccgca aaccatcgct ttggttgggg
      661 ccgatgccga attcgcccgc aatgcggttg atggcgcccg cactctggcg aaacgcgccg
      721 gacttaaaat cgtctacgat aaaacctatc ccccaacgac gcaggattat gcgccgattg
      781 tccgcgcgat tcaggcaaca tcgcctgacc tggtattcgt cggctcctat ccgaccgata
      841 ccgtcggcat gatccgggcg gtgaacgagg tcgggctgaa cgtgaaaatg tttggcggcg
      901 cgatggttgg atcacaactt ggctcactga aaagccagat gggtccgatg ctgaacggac
      961 tcgtcaacta cgatttttgg ctcccggtcg gcgcctatgc gacgccggag gccaaggcgt
     1021 tcatcgccaa ataccaatcc cgtgtcggtg acagcggcgc cgatacgctt ggctattacc
     1081 agccgccctt cgcctatgcc gatctgcagg tcattggcga ggcgatccgc gaaaccggcg
     1141 gcaccgatca ggccaaactg gcggactatc tacggtccca tacattccac acgttggttg
     1201 gcgacatcaa attcggtccc aatggcgaat ggacagagcc gcgcgtcctg gaggtccagt
     1261 ttcatgacgt caaagggcat gatctggacc agttccgcac catggatacg caaacggtat
     1321 tgtatccgcc ggaattgaag acagggacgg tgcgatatcc ttactcgtcc aaccaccagt
     1381 gatgcagcct gatgctgctc agccatcttg agcagcgcac gaccccgatc gcggagtgtt
     1441 acgcggcttc caggattgcg ctcgacgaag cctcgcgatt gctccgccgc catacgttcg
     1501 gcgtttctcc gacaagccga gtgaacaccg tagtgaagtg cgcctgagtc ttgaaaccaa
     1561 cgtcaaaagc gatatccacc aacggcagtt gagagctcat cagcagctcc tgagcacgct
     1621 cgatccgtcg ctgcagcaga tattcgtgcg gccgcatgcc ggtcgccacc cggaactgag
     1681 ccgcgaaatg catgcgtgac aggccggtgg cagtggcgat gtcggcaagg ctgattggtt
     1741 cgccgagatt tgccatcata tattgggtt
//
LOCUS       DATAVD010000264         4285 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_398091, whole genome shotgun sequence.
ACCESSION   DATAVD010000264 DATAVD010000000
VERSION     DATAVD010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4285
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_398091"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1453
                     /locus_tag="VHX39_04790"
     CDS             <1..1453
                     /locus_tag="VHX39_04790"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEX3990473.1"
                     /translation="GLSASARNCLVDWSMIMLDPGDPGPLYLQIATRLRSAIATGALS
                     SGARLPSARTLSAQLGVARGSVVAAYDLLAGEGAIEPRGAAGTIISTRLTGLVQPPAQ
                     RALRLAKPLATSPEAILPFQRGLPALDAFPRKLWSALTAKAARAMTEADLAYPDVCGA
                     IALRQQIVAYLGLARGIVCSPHQVLITNGYQGALTLVRQALLRPGDAVWMEDPGHPPA
                     FQALEIGGASLIPVPVDAEGMRIAAGLTAQPKARLAVVTPTHQSPLGVSLSLPRRLAL
                     LAWAEEARAWVLEDDYNAEFRYTGAIPPSLKSLDRGERVLFAGSFSKTLFPSLRLGYL
                     VVPDALVETMTRAARLITRGPPLLEQSVTAAFMAGGHFARHVKRMRGLYRRRRAALAA
                     ALTGHFPVELPAGGMHLLIRLPDGVDDGDAARRALGVGLAPTALSGLSIAHHTGRGLL
                     LAFTNVREEDAAGLVGQLLAVIVPGTSPGMTIE"
     gene            1553..2956
                     /locus_tag="VHX39_04795"
     CDS             1553..2956
                     /locus_tag="VHX39_04795"
                     /inference="COORDINATES: protein motif:HMM:NF012946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX3990474.1"
                     /translation="MDPNRHGGNATNPPTLETPRICVIGAGPSGLTTLKNLLALGLTN
                     VACFDEADAIGGNWVFREDKPSVHEATHIISSKRLSEFEDFAMPAEFPDFPSHHEIRA
                     YFEDYAAHFQLRPFIRLQERVNSATRCADGSWSVRIATSHGVEEATFDYLLVCSGHHR
                     VAQIPEYPGQFAGEVLHSGSYKHAADFANKRVLVVGGGNSACDIAAEISRFATRTCIS
                     MRRGYHILPKKLFGYPIDRLYATFRWLPRPLFKAVLRMKVGRSEDYGLQAPRSEPTAM
                     HPTLNSNVLKALRSGAVIPRTGIARLHENGAEFADGTVEAFDTIIWATGFRTGFPFLD
                     ASVVDWNMAECPPLYLKMLHRDVANLFFIGLFQPLGCIWRLADHQARIAALQIAGHLE
                     RPVDLGARIAREMELRHTRFDQSARHAIEVDYHVFRKELLEHLKTARTTSRSPFRRGG
                     STAAASPFTYSYRPKVG"
     gene            complement(2925..3467)
                     /locus_tag="VHX39_04800"
     CDS             complement(2925..3467)
                     /locus_tag="VHX39_04800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990475.1"
                     /translation="MTSVVVAFVLALSACSSAGDEVSNAGSYDAAAAAPVAATPYYVE
                     FRTRPYFSITHTFIVYGAQDANGHPLEAKSAGFFPNAGAIGPFIGIIAIGGEVGDETY
                     YVPLPSSTIFHRNLTAEQYGRLTAYIDKERAESKVYNLIFNNCNDFVAGAADAIGLKV
                     PFVHVLPPPVFIRLLADMNT"
     gene            3729..>4285
                     /locus_tag="VHX39_04805"
     CDS             3729..>4285
                     /locus_tag="VHX39_04805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HEX3990476.1"
                     /translation="MDKASGRLPSLHSLLAKPEAAGLIDRFGRPEVIDALRQTLDAHR
                     LQRRFGLPAAAVLEFATETLCRRIAPSQRPVFNLTGTVLHTNLGRALLPPEAAKAAAA
                     ALQGATNLEYDLDAGGRGERDDHISGLLRELTGAEAATVVNNNAAAVMLVLNTLALGR
                     QVPVSRGELIEIGGAFRIPDIMARSG"
BASE COUNT          743 a         1356 c         1336 g          850 t
ORIGIN      
        1 tggactatca gccagtgcca gaaattgcct ggttgactgg tccatgatca tgctcgaccc
       61 cggtgatccg gggccactct acttgcagat cgcgacgcgg ttgcggtcgg ccatcgccac
      121 cggcgcattg tcgtcgggcg cgaggctgcc atcggcgcgg acgttgtcgg cgcaactcgg
      181 ggtcgcccgc ggctcagtcg ttgcagccta tgatctgctg gcgggcgagg gtgcgatcga
      241 accccggggt gctgcgggga ccatcatttc cacccggctg accggacttg ttcagccacc
      301 ggcacagcgt gccctgcggc tggcaaagcc actcgctaca tcgcccgaag ccatattgcc
      361 gttccaacgc gggttgccgg cactggacgc gtttcctcgc aagctttggt cggcactgac
      421 cgcgaaagcg gcgcgggcca tgaccgaggc tgacctcgcc tatccagatg tgtgcggggc
      481 gatcgcgttg cggcagcaga tcgttgccta tctcggcctc gcccgcggca ttgtctgctc
      541 gccgcatcag gtgctgatca ccaatgggta tcagggcgcc ttgaccctgg tacgccaggc
      601 actgctgcgg ccgggcgatg cggtgtggat ggaggacccc ggccatccgc ctgcttttca
      661 ggccctggag atcggcggcg ccagcctgat accagtgccg gtcgatgccg aagggatgcg
      721 cattgccgcc ggcctgacgg cacagcccaa agcgcggctg gcggtggtga caccgacgca
      781 ccaatcgccg ctcggcgtct ccctgtccct cccccgccgt ctcgccctcc tggcctgggc
      841 cgaagaagcg cgggcctggg tgctggagga cgattacaac gctgaattcc gctacaccgg
      901 ggcgatcccg ccgtcgttga aatcgctcga ccgaggcgaa cgtgtgctgt tcgccggcag
      961 cttcagcaaa acactgtttc cgagcctgcg tctgggttac ctggtggtgc cggatgctct
     1021 ggttgaaacg atgacgcggg cggcgcggct gatcacccgc ggcccaccgt tactcgagca
     1081 atcggtgact gccgctttca tggcgggagg ccatttcgca cggcatgtga agcgcatgcg
     1141 cgggctttac cggcggcggc gcgcagcgtt ggcggcggct ctgacgggcc atttcccggt
     1201 ggagttgccc gccggcggga tgcatttgct gatccggctg cccgatggag tggacgacgg
     1261 cgacgctgcc cggcgagcgc ttggcgtcgg actggcgccg actgcgttgt ccggactgtc
     1321 gatcgcgcat cacaccgggc gcggattgct gttggccttc accaatgtgc gggaggaaga
     1381 cgcggccgga ctggttgggc agctgcttgc ggtgattgtc cccggaacaa gtccggggat
     1441 gacgattgag tgagtcacga ttctgggtat caggcgctgc gcgcgttccg acggcctggc
     1501 gcatcccgca ggaaagtggc aagaacaacg attatatccg atacgaggtg ccatggatcc
     1561 gaatcggcat ggcggtaacg caaccaaccc gccgacactc gaaactcccc gtatttgcgt
     1621 tatcggcgcc gggccttctg gcctcacgac tctcaagaac ctgctggcgc ttggcctgac
     1681 caatgtcgcg tgcttcgacg aggcggacgc gatcggcggc aactgggtgt ttcgcgagga
     1741 caagcccagt gtgcatgaag cgacacatat tatatcgtcg aaacggttgt cggagttcga
     1801 ggacttcgca atgccggcgg agttccccga tttcccctcg catcatgaaa tccgcgcgta
     1861 tttcgaggac tatgcagccc attttcaact taggccgttc attcgtttgc aggaacgagt
     1921 caactcggcc acccggtgcg ccgatggcag ttggtcagtg cggatcgcga cctctcacgg
     1981 cgtcgaggaa gcgacattcg attatctgct ggtttgttcc ggacatcacc gggttgccca
     2041 aattccggaa tacccgggcc agttcgccgg cgaagtcctg cattccggta gctacaagca
     2101 cgcggcggat ttcgcgaaca agcgcgtgct ggtcgttggc ggcggtaact cggcctgcga
     2161 catcgcggcc gagatttcgc gtttcgcgac gcgcacctgt atcagcatgc ggcgaggcta
     2221 ccatatcctt cccaaaaagc tgttcggcta tccgatcgat cgtttatacg ccacgtttcg
     2281 gtggttgccg cgaccattgt tcaaagcggt gctgcggatg aaggtcgggc gttccgaaga
     2341 ctacgggctg caggcgccgc gctccgagcc gacggcgatg catccgacac tcaattccaa
     2401 cgtgttgaag gcgttgcgca gtggggcggt catccctcgc accggcatcg cgcggctgca
     2461 cgagaacggc gccgagtttg ctgatggcac ggtcgaagcg ttcgacacca tcatttgggc
     2521 caccggattt cgtaccggat ttccgtttct ggacgcctcg gtggtcgatt ggaacatggc
     2581 tgaatgtccc ccgctgtatc tgaaaatgct ccaccgggat gtcgccaatt tgtttttcat
     2641 cggcttgttt cagccacttg gttgcatctg gcgtttggcc gaccatcagg cccgcatcgc
     2701 tgctctccaa attgccggac atctggaacg cccagttgac ctgggcgcgc ggatcgcacg
     2761 cgagatggag ctgcggcata cgaggttcga tcagtcggcg cgtcacgcca tcgaagtcga
     2821 ttaccacgtt ttccgtaagg aattgcttga acacctcaaa accgcccgaa cgacatcgcg
     2881 cagcccgttc cgtcgcggcg gctcgactgc cgccgcttcg ccgttcacgt attcatatcg
     2941 gccaaaagtc ggatgaatac cggtggtggc agcacgtgca cgaacggcac tttgagtccg
     3001 atggcatcgg ctgcgcccgc cacgaaatcg ttgcagttat tgaatatgag attatagact
     3061 ttggactccg cccgctcctt atcgatatac gctgtcaggc gcccatattg ttcggctgtc
     3121 agattccggt gaaatatggt cgatgacgga agcggcacgt agtacgtttc gtcgcctacc
     3181 tcgccgccga tcgcgatgat gccgatgaag ggtccgatgg cccccgcgtt gggaaagaac
     3241 ccggcgctct tcgcctccag cggatgtccg ttcgcatcct gcgcgccgta cacgataaat
     3301 gtgtgggtga tgctgaagta cggccgggtc cggaattcga cataatatgg cgtagcggca
     3361 accggcgcgg cggctgccgc gtcgtacgag cccgcattcg aaacttcgtc gccagccgaa
     3421 ctacaggcgg acaacgccag aacgaaagcg accacaacgg atgtcaaccc gtaagcgccg
     3481 gcttttgccc acagcgctgt cagtgaccat cgacccatca tcctcggccc aaaatctacg
     3541 cactccccgg agcacaggga gcatttttgc acacctgaaa tggccggtta acccctgttt
     3601 ccgattcgct cgatgtcttg cgttcgcaag cgcagcaaaa ccggggtgtt ccgcctcgtg
     3661 tggacggtca aaacatggtg ccgcccagtg gtttaccccg cgtctggtcc ggccttagtg
     3721 tcacctcgat ggacaaagca tcaggccgcc tgccctcgct gcattccctg ttggcgaaac
     3781 ccgaggccgc cggcctgatc gaccggttcg gccgcccgga agtcatcgac gcgttacgtc
     3841 agacgcttga cgcgcaccgg ttgcaacgcc gtttcgggtt gccggcggcc gcggtgctgg
     3901 aattcgcaac cgagaccctg tgccgtcgca tcgccccttc ccaacgcccg gttttcaacc
     3961 tcaccggcac ggtgctgcat accaatctgg gccgcgcttt attgccgccg gaggccgcga
     4021 aggctgcggc ggccgctctt cagggggcca cgaacctgga gtacgacctg gacgccggcg
     4081 gccgtggcga gcgcgacgac cacatttccg gtctgctccg ggaactgacc ggggccgagg
     4141 ctgccacggt cgtcaacaac aacgccgctg ccgtgatgct ggtgctgaac accctggcgt
     4201 taggccgtca ggtcccggtc tcccgcggcg aattgatcga aatcggcggc gccttccgaa
     4261 tccccgacat catggcccgc tccgg
//
LOCUS       DATAVD010000265         4284 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3376129, whole genome shotgun sequence.
ACCESSION   DATAVD010000265 DATAVD010000000
VERSION     DATAVD010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4284
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3376129"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2267
                     /locus_tag="VHX39_04810"
     CDS             <1..2267
                     /locus_tag="VHX39_04810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX3990477.1"
                     /translation="HVRPNRDGLKVGGHQASCASSISILTALYLEIARPQDRIAVKPH
                     AGPVFHAINYLLGRQSQEKLEGLRRFGGIQPYPSRVKDGAEVDFSTGSVGLGVAMTTF
                     SALMADYVRLHGLGRADLPPGRHIAIAGDAELDEGNIYEALLEGWKHDVRDVWWVVDY
                     NRQSLDSVVPDRLFGRIEGLFRDMGWNCVTIKFGRALEAAFAREGGEDLRRWIDDCPN
                     SLYSALTFQGGAAWRQVLLADLGRSRARASIIDPLNDAELGALMTNLGGHDIETLIEH
                     FRAADALGDQPTCFIAYTIKGMGLPFAGHKDNHAGLMTKEQMEQFRTDMGIRPGHEWD
                     LFEGLDLSAADFEKFLAATPFATKLTAEGRALSAPIIAVPATLPTPKTTGRKMSTQGG
                     FGDILAELGRGLGDLKELAAHVMTTSPDVTVSTNLGPWVNRRGIFDRHTRNDVFRDSK
                     LASAQRWGMSPLGQHVELGIAEQNLFLLLGAAGLTPEMTGARVLPIGTVYDPFVNRGL
                     DALLYACYQDARFLLVSTPSGLTLAPEGGQHQSVNTPLIGMAADRLASFEPAHVDELA
                     ILLRHALEFMQQPNGSAVWLRLSTRTLAQPDRPLDPADVIAGAHWVVKPADGARLALA
                     YQGPVATEVMEAFDAIAEDVAGAGLLAITSPDRLHAGWLDAMQARRDGDRSARSHIER
                     ILAPLAPGAALVTVLDGHPATHAWLGSVRGQRVVPLGVDHFGQGGDIPDLYRAYGLDT
                     DAILDACAQALLAN"
     gene            2303..2740
                     /locus_tag="VHX39_04815"
     CDS             2303..2740
                     /locus_tag="VHX39_04815"
                     /EC_number="1.-.-.-"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF013412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX3990478.1"
                     /translation="MARIPKVLQEHINTAFPDFVTLVGTALPDGYAQITPRGGTLVYD
                     DEHLALWERGKGSTAANMKDGTKVTVYFRKPSLRADGTLPLGGIARFYGTAKIEKSGP
                     AYEEVWRRLVQPEKDRDPEKKGFAVLIKIERAEDLNGAPLAGS"
     gene            3052..3594
                     /locus_tag="VHX39_04820"
     CDS             3052..3594
                     /locus_tag="VHX39_04820"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEX3990479.1"
                     /translation="MTLPDFLIWEERQELRYEFDGHAPRAMTGGTYEHDTITFNVRRA
                     LDQRLEGNLCRACGPNLKIIVQGKARYPDCLVTCSPIKRGSTVIDEPVVVIEVISEDS
                     ARTDRIEKLREYQATASIQRYIIVEQRGVGALVLARDGDRWVATAATAEDTLAMPEIG
                     IDVPLSEFYFGLDLDEADQG"
     gene            complement(3623..>4284)
                     /locus_tag="VHX39_04825"
     CDS             complement(3623..>4284)
                     /locus_tag="VHX39_04825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990480.1"
                     /translation="SPPDEASAGVDQIAIGRRLGLPPARIVAPVIAAGLMWGSFNAGV
                     VGYFSFVPALLAERGGMTMTQSGALTSLALWVGMLSIPFGGVIAQWLRKPGTTIVLFC
                     SCAATALALIAAGVPPLFACIAFGLAIGPPPGVITSLPTRIMTPAERPGGFGVFYTCH
                     FLLQAAGPAVAGWLHDSAGGAAAVSFAAAMFLVPLPMLAVFKRLVRNLQRPGPNPELA
                     A"
BASE COUNT          799 a         1335 c         1374 g          776 t
ORIGIN      
        1 atcatgtccg gccgaatcgg gacgggctga aagtgggcgg gcatcaggca tcctgtgcct
       61 ccagcatttc gatcctcacg gcgctgtatc tggagatcgc ccgtccccag gaccgcattg
      121 ccgtcaaacc gcatgccggt ccggtattcc acgcgatcaa ttatttgctc ggccggcaga
      181 gccaggaaaa gctcgaagga ttgcgccggt ttggcggcat ccaaccctac ccgagccgcg
      241 taaaagacgg cgccgaggtc gatttctcga ccggctcggt cggccttggc gtcgcgatga
      301 cgaccttctc tgcgctcatg gcagactacg tccgtctgca tggcctgggc cgagccgatc
      361 tgccaccggg ccggcacatc gccatcgcgg gcgacgccga actcgatgaa ggcaacatct
      421 acgaggcgtt gttggaaggc tggaagcacg atgtccgcga tgtctggtgg gtcgtcgact
      481 acaaccgcca aagcctggac tccgtcgtgc ccgaccgcct gttcggccgc atcgagggcc
      541 tgtttcgcga catgggctgg aactgcgtca ccatcaagtt cggccgcgcg ctggaggctg
      601 ccttcgcgcg cgagggcggc gaggacctcc ggcgctggat cgatgactgc ccgaacagcc
      661 tgtattccgc tctgaccttt cagggaggtg cggcctggcg tcaggtcctg ctggccgacc
      721 tcggccgttc ccgagcccgc gccagcatca tcgatccgct caacgacgcc gaactgggcg
      781 cgctgatgac caacctgggc ggtcacgaca tcgaaaccct gatcgagcat tttcgcgccg
      841 ccgatgcgct tggcgatcaa ccgacctgct tcatcgctta taccatcaag ggcatgggac
      901 tgccgtttgc cggccacaaa gacaatcacg ccgggctgat gaccaaggag caaatggaac
      961 agttccgcac cgacatgggc atccgtcccg gtcacgagtg ggacctgttc gaggggctcg
     1021 atctgtcggc agccgatttc gaaaagttcc ttgccgccac accgttcgcc acaaagctaa
     1081 cggccgaggg acgcgcttta agcgccccca tcattgcggt tccggccaca ctcccgacgc
     1141 cgaaaaccac cggccgcaag atgtccacgc aaggcggttt cggcgacatc ctcgccgaac
     1201 tgggccgcgg tctgggtgat ctgaaagaac tggcggcgca cgtcatgacc accagcccgg
     1261 acgtgacggt gtcgaccaat ctcggaccct gggtgaaccg gcgcgggatc ttcgaccggc
     1321 atacccgcaa cgatgttttt cgcgattcga aacttgcctc ggcgcagcgc tggggcatgt
     1381 cgccacttgg tcaacacgtc gaactgggca ttgccgagca aaatctgttt ctgctgctgg
     1441 gtgctgcagg tttgacgccg gagatgaccg gcgctcgggt tttgccgatc ggcacggtgt
     1501 atgatccgtt cgtcaaccga ggcctcgatg cgctgctcta cgcctgttat caggacgcac
     1561 gatttttgct cgtttcgacc ccgtccggac tgaccctggc gccggagggc ggacaacacc
     1621 agtcggtcaa tacgccgttg atcgggatgg ccgccgaccg gctcgccagt ttcgagccgg
     1681 cgcatgtcga cgaactcgcg atcctgctgc gccatgctct ggagttcatg cagcagccga
     1741 acggttcggc ggtctggttg cggctgtcga cccgcaccct ggcgcagccg gaccggccgc
     1801 tcgatccggc cgacgtgatc gccggcgcgc attgggtggt gaagccggcg gatggcgcac
     1861 gtctggcatt ggcctatcag ggaccggtcg ccaccgaagt catggaagca ttcgacgcca
     1921 ttgccgagga tgtggccggt gccggactgc tggcgattac ctcgccggac cggttgcacg
     1981 ccggttggct ggatgcaatg caggcccggc gagacggcga tcgctcggcg cggtcgcata
     2041 tcgaaagaat tctggcgcca ttggctccag gtgcggccct ggtgacggtg ctggacgggc
     2101 atcccgccac gcatgcatgg ttgggctcgg tccgcgggca gcgcgtggtg cctctgggcg
     2161 tggatcattt cggccagggc ggcgacattc cggacctgta tcgcgcctat gggctggaca
     2221 ctgacgcgat tctggatgcc tgtgcgcagg ccttactggc gaactgaggc cttaccggcc
     2281 aactgacaac ggggagaaga cgatggcgcg tattccgaaa gtcctgcagg agcacatcaa
     2341 cacggcgttt ccggattttg tgaccttggt tggcaccgcg ttgccggatg gctacgccca
     2401 gatcacgcca cgcggcggca cgctggtcta tgacgatgag catctggcgc tgtgggaacg
     2461 cggcaagggc tccacggcgg cgaacatgaa ggacggcacc aaggtaacgg tctatttccg
     2521 caagccgtcg ctgcgcgctg atggcacgtt gcctctgggc gggatcgccc ggttctacgg
     2581 cacggcaaag atcgaaaagt cgggtccggc gtatgaggaa gtgtggcggc ggctggtgca
     2641 gcccgagaag gatcgcgatc ccgagaagaa gggcttcgcg gtgctgatca agatcgagcg
     2701 ggcggaggat ctgaacgggg caccgctggc gggctcgtga gggtcgacgg gcaggctgta
     2761 ttcgcacgat cagtctattg ccgtggagcc cgagaataag ccggtccaga tcgcaaatcc
     2821 ggccgtggcc gccaaaatcg aacctggccg ccgcgaccgg tatgacccgg aggcaaggca
     2881 acttttacgg ccgtcttgtt gatgctcctt tttgacgaat gctgcttgcc acactttcat
     2941 cccggatttt cggtctgcta tcgggtttct gggaggcgtc aacacaaagc cattcctccc
     3001 agccacactt catgatacca ggtcggcatg gccgttgtgt cgcaaaaccc gatgacactc
     3061 cctgacttcc tgatctggga agaacgccag gaattgcgct acgagttcga tggtcatgcg
     3121 ccacgcgcca tgaccggagg cacgtatgag catgacacaa tcacattcaa cgtccggcgg
     3181 gcgttggacc agcgtctcga aggcaatctc tgtcgtgcat gcggccccaa cctcaagatc
     3241 atcgtgcagg ggaaggcgcg ttatccggac tgtctggtga cctgctcacc gatcaagcgt
     3301 ggctcgaccg ttatcgacga accggtcgtg gtgatcgagg tgatcagcga ggacagcgcc
     3361 cgcaccgatc gcatcgaaaa actgcgcgaa tatcaggcaa ccgcgtcaat ccaacgatac
     3421 attattgtcg agcaacgcgg cgtcggtgct ctggtgcttg cgcgagacgg cgaccgctgg
     3481 gttgctacgg cggccacggc cgaagatacg ctcgcgatgc cggagatagg gatcgatgtg
     3541 ccgttgagcg aattctactt cggtctcgat ctcgatgagg ctgatcaggg ctgaaccggc
     3601 tgccgaagtg tcggttgcgg gatcacgcag caagttccgg gtttgggcca ggtcgttgca
     3661 aattccttac cagtcgtttg aacaccgcca gcatcggcag cggaacaagg aacatcgcgg
     3721 ctgcgaagct caccgcggcg gcgcccccgg cgctgtcgtg cagccagccg gcaaccgctg
     3781 gtcctgctgc ctgcagcaga aagtgacagg tgtagaacac gccaaacccg cctgggcgtt
     3841 ctgccggagt catgatacgg gttggcaatg acgtgattac gcccggcggc gggccgatcg
     3901 caaggccaaa tgcgatgcag gcgaacaacg gcggcacgcc ggcggcgatc agcgccaggg
     3961 ccgtcgcggc acaactgcag aacagcacga tcgttgtacc gggcttgcgg agccattgcg
     4021 cgatgacgcc gccaaatggg atcgacagca tcccgaccca cagcgccaga ctcgtcagtg
     4081 cgccgctctg ggtcatggtc atgccgcctc gctcggcgag cagggccggg acaaagctga
     4141 aatatcccac cacgccggcg ttgaatgaac cccacatgag cccggccgca atcactggcg
     4201 caacgatccg cgccggcggc aagcccagac gtctgccgat ggcaatttgg tccactcccg
     4261 ccgacgcttc gtcgggcggc gagc
//
LOCUS       DATAVD010000266         3054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_956191, whole genome shotgun sequence.
ACCESSION   DATAVD010000266 DATAVD010000000
VERSION     DATAVD010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3054
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_956191"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..301)
                     /locus_tag="VHX39_04830"
     CDS             complement(<1..301)
                     /locus_tag="VHX39_04830"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HEX3990481.1"
                     /translation="MPVRLLSITSAFWLACTAQSSAQALMASHLLTAEAANTMVMAAL
                     AECQKNGYRVSAAVVDRGGNLLAFVRDPTAGPHTAESSRRKAFTAATFGMTSAAFA"
     gene            complement(321..2603)
                     /locus_tag="VHX39_04835"
     CDS             complement(321..2603)
                     /locus_tag="VHX39_04835"
                     /EC_number="1.1.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HEX3990482.1"
                     /translation="MADGGIDTRTAHVSAEEALAMHAGGRPGKLEIRVTKPIVTARDL
                     SLAYSPGVAEPCLHIARDESLAYDYTAKGNMVAVISNGTAVLGLGNLGAVASKPVMEG
                     KIALFKRFADIDGIDLELGTEDVDEFVNAVRFLRGFGGINLEDIKAPECFVIEQRLRE
                     CMDIPVFHDDQHGTAIVAAAGLINACHLTNRELRDAKLVVNGAGAAAIACVELLKAMG
                     MRPEHVILCDTRGVVYQGRTDGMNQWKSAHAAQTRARTLSEALEGADIFFGLSVKGAM
                     TQGMVRQMAAKPIIFAMANPDPEITPEEARAASPDAIIATGRSDYPNQVNNVLGFPYI
                     FRGALDVRASTINDTMKIAAAEALAQLAREDVPDEVHSASAGRRLTFGPEYIIPNAFD
                     PRLITRVPPAVARAAVESGVARRPIMDLKRYARDLSGRLDPTAGALDAIMERVRSEPR
                     RVVFAEGEEEKVVRAAVAYRDAGYGRPVLIGREDRVLATLASLGLGRTDGIEIHNARL
                     SGANPKYVDFLYDRLQRKGYLRRDVQRMVNQDRNVFAACMVATGDADAMVTGLTRSTS
                     VCLADVGHVIGSKPGQINFGLTLLFGPHGRTIFIADSQVHFRPDAEQLADIVVGAAAA
                     AKLLGHEPRVALLSHSTFGDPAHDRVAPMLDAVKLLDGRKVDFEYDGEMSPDVALEAS
                     IRALYPFCRLTGDANVLVMPGLHSAHILARIMHHLGGGTTIGPLLIGMERPVQIVPMD
                     ATVSQIVDVACLAAYQAVAR"
     gene            complement(2689..>3054)
                     /locus_tag="VHX39_04840"
     CDS             complement(2689..>3054)
                     /locus_tag="VHX39_04840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3990483.1"
                     /translation="DIYLGWFFRNYGHRPDVIPDGDIAEYLRVYRQPGALRAGFGYYR
                     AIPRDISDNEAINATFKLPMPVLALGGDSGWGRRMEVVESLRRLATDVRGGIIENCGH
                     WMPEEQPAALLKQLLAFFA"
BASE COUNT          565 a          994 c          940 g          555 t
ORIGIN      
        1 tggcgaaggc cgcgctggtc atcccgaatg ttgccgcggt gaatgccttc cgccgcgatg
       61 actctgccgt atgcggacct gcggtcgggt cacggacaaa cgccagcaga ttgccgccgc
      121 gatcgaccac ggcggcggaa acccggtacc cattcttctg gcattccgcc agcgccgcca
      181 tcaccatcgt attggccgcc tccgccgtca gcaaatgact tgccatcagc gcctgcgccg
      241 aactctgggc tgtgcacgca agccagaacg cagacgtgat gcttaagagt cgaaccggca
      301 tgggtgaaac ccctccaatt ttaccgcgcc accgcctgat acgcagcgag gcaggcgaca
      361 tcgacgatct ggctgaccgt ggcatccatc ggcacgatct ggaccggccg ctccatgccg
      421 atcagcaacg gtccgatcgt cgtgccacca ccaagatggt gcatgatccg cgccaggata
      481 tgggccgaat gcaagcccgg catcaccagg acattggcat ctccggtcaa ccggcaaaat
      541 gggtacaacg cccgaatgga tgcttcgagc gccacgtcgg gactcatttc gccgtcatac
      601 tcgaaatcga ccttgcgtcc gtccagcagt ttcactgcat ccagcatggg cgccacccgg
      661 tcgtgtgccg gatcgccaaa cgtcgaatgc gacaacagcg cgaccctcgg ctcgtgcccc
      721 agcagcttcg cggcggcggc ggcgccaacg acaatgtccg ccaactgttc ggcatccggc
      781 cggaagtgca cctgcgagtc ggcaatgaaa atcgtccgtc catgcggtcc gaacagcagc
      841 gtcaggccga aattgatttg accgggcttc gatccgatga cgtgccccac atcggccaga
      901 cacaccgacg tggaacgcgt aaggccggtg accatcgcgt cggcgtctcc ggttgccacc
      961 atgcaggcgg cgaacacgtt gcggtcctga ttgaccatcc gttgcacgtc acgccgcaga
     1021 tagcctttgc gctgcagcct gtcgtacaga aagtcgacat atttcgggtt ggcaccggac
     1081 aggcgagcat tatggatctc gatcccgtca gtccggccaa ggcccaggct ggcaagcgtg
     1141 gccaggacgc ggtcctcgcg tccgatcagc accggcctgc cgtaacctgc atcgcgatac
     1201 gcgacggcgg cgcggacgac cttctcctcc tcgccctcag cgaacacgac acggcgaggc
     1261 tcactgcgta cccgttccat gatcgcatcc agtgcgccgg ccgttggatc gagccggcct
     1321 gacaggtcgc gcgcgtaacg tttcaggtcc ataatgggcc ggcgcgccac gcctgactcg
     1381 accgcggctc gggccacggc agggggcacc cgcgtgatca accgtggatc gaacgcattc
     1441 gggatgatgt attccgggcc aaaggtcagc cgcctgccgg ccgaggcgga atgcacctca
     1501 tccggcacgt cctcgcgggc caattgcgcc agagcttcgg cggcggcgat cttcatggtg
     1561 tcgttgatcg tgctggcgcg cacatcgaga gcaccgcgga agatataagg aaagccgaga
     1621 acgttgttga cctgattggg ataatcgctg cgcccggtgg cgatgatggc atccgggctg
     1681 gcagcgcggg cttcctccgg agtgatttcc ggatcgggat tggccatggc gaaaatgatc
     1741 ggtttcgccg ccatctgacg caccatgccc tgggtcatcg cgcccttgac cgagagaccg
     1801 aagaaaatgt cggcgccttc cagcgcttcg ctcagtgtgc gagccctggt ttgcgccgca
     1861 tgcgccgatt tccattgatt catgccgtcg gtgcggccct gatacacaac gcctcttgtg
     1921 tcgcacagaa tcacatgctc gggtcgcatg cccatggcct tcagcaattc cacacaggcg
     1981 atcgccgcgg cgccggctcc gttcaccacc agctttgcat cgcgcagttc gcggttggtc
     2041 aggtggcagg cattgatcag accggccgcg gcgacgatgg cggtgccgtg ctgatcgtca
     2101 tggaacaccg gaatatccat gcactcgcgc aaccgttgtt caatgacgaa acattccggg
     2161 gccttgatgt cttccagatt gatgccgccg aatccgcgca ggaatctcac tgcgttgacg
     2221 aattcatcga cgtcctcggt gccgagttcg aggtcgatgc cgtcgatgtc ggcaaaacgc
     2281 ttgaacaggg cgatcttgcc ctccatcacc ggtttcgatg cgaccgcgcc gagattgccc
     2341 agtccgagga cggcggttcc gttggaaatc accgcgacca tgttgccttt ggcggtgtag
     2401 tcgtacgcca gcgactcatc gcgcgcgatg tgcaaacacg gctccgcgac gccgggcgaa
     2461 taggccagcg acaggtcgcg cgcggtgacg atcggcttgg tgacacggat ctccagcttg
     2521 cccggacggc cgccggcgtg catggccaag gcttcttcag ccgagacgtg cgcagttctg
     2581 gtgtcgatgc cgccgtcagc catggcgttc ctcctcggga ttttctggat cggccatcat
     2641 ggtcgaggtt cccccggatc ggaaggcccc tcaaccaagg cgtgtgcgtc aggcgaagaa
     2701 cgccagcaac tgcttcagga gtgcggcggg ctgttcctcc ggcatccaat ggccgcagtt
     2761 ctcgatgatg ccgccgcgca cgtcggtggc caggcggcgt aacgattcga ccacctccat
     2821 ccggcggccc cagccactgt cgccgcccag agccaggacg ggcatcggga gcttgaaggt
     2881 ggcgttgatc gcctcgttgt cggagatgtc gcgggggatt gcccggtagt agccgaagcc
     2941 cgcccgtagt gcgcccggct gccggtagac gcgcagatac tcggcaatgt cgccgtccgg
     3001 aatgacatcg ggacgatgcc cgtagtttcg aaaaaaccag ccgagataga tgtc
//
LOCUS       DATAVD010000267         5642 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_771410, whole genome shotgun sequence.
ACCESSION   DATAVD010000267 DATAVD010000000
VERSION     DATAVD010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5642
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_771410"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(168..1565)
                     /locus_tag="VHX39_04845"
     CDS             complement(168..1565)
                     /locus_tag="VHX39_04845"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990484.1"
                     /translation="MLELLDKQQKLTMNQWKIAIAATLGDMLDFFDFFLIGFVLAFIV
                     KDWHLTYGQSGLILLASGISAPFGSLFYGWLADKIGRRKVMILTVLNFSLATGAMALT
                     PQGGWIFLVICRFIVGLGVTGLYSVDITLVQEFVPTRKRGWLTGLTTTMLPAGVLLGA
                     LLGAYTTPFIGWRGLFAIGLLPALLTLYIRAWVPESPYWLMRMGRPEEARRSVAWALQ
                     IDPETIPLPALVPTIEHTRWTEVFKYPRSLIAGCLTGLTQTGGVALGLWMVTLFVMVL
                     KISPAEASGLVIWVSLSAIAGRFFCSWISDAMGRRASGVLSCLVAATFMSLAGYMHNI
                     FIGGMSMFFVMIVAQNFFGSGNYSIVGPYMGELWPARLRGSGMGLVYGVGNLGKFIGP
                     AGLALIAGSSNFVKPQATLDALIPAFNYFAFWYVLGAAAFWFVGFETGNRSIAEIDAE
                     LSTQSAAAAERLRTS"
     gene            1672..2391
                     /locus_tag="VHX39_04850"
     CDS             1672..2391
                     /locus_tag="VHX39_04850"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3990485.1"
                     /translation="MTRSQNRNPADASQQWEYFRPDWHAAPYAPHSPPMDQLPGLPEW
                     AFEKADPSPDAEFYVPPRLVTHIDDGAIATVTQVYRQTFPSGGAVLDLMSSWVSHLPD
                     DVEYASVVGHGMNAQELAANPRLSRWFVQDLNLEPALPLDDAAFDGAGLCVSVQYLQR
                     PVEVFREVARVLRPEARFVVSFSNRCFPTKAVAIWQALSGPDQQRLVGNYMQAAGFNT
                     IADHAATPMDGDPLWVVVGKV"
     gene            2412..2858
                     /locus_tag="VHX39_04855"
     CDS             2412..2858
                     /locus_tag="VHX39_04855"
                     /inference="COORDINATES: protein motif:HMM:NF037170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3990486.1"
                     /translation="MATKPRLVGINHVAIEVDDIDAALEFYGKIFDFTLRGKGERNAF
                     IDIGDQFINLTKATPRPSSEPERRHIGFVVDDRSSVRASAEAAGATILPGKFLDFLDP
                     WGNCIEVVEYSNVQFTKAPQVLRGMKLELAKNENARRELAEKGLGE"
     gene            complement(2874..3968)
                     /locus_tag="VHX39_04860"
     CDS             complement(2874..3968)
                     /locus_tag="VHX39_04860"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3990487.1"
                     /translation="MRIGLFYQIQVPKPWSATSEAERIYEALEQIPYAEQQGFSSVWF
                     SEHHFRPVWSHNSAPDLTLAAVSQRTSRIRLGIGVVLAPIHHPLHVAARMATLDILSH
                     GRVDVGLGRTGYPYQLTPFGSDLGDTRGMWQEFADVLPRIWSQDEIEYQGSYFQIPRR
                     EVLPKPLQKPHPPLWSACGSDETARLTANLGMGGLFGGEGGPDRVKQLMALYRDALPS
                     HKPAPRTALMTAGFCHEDPRVVAERGTELVGWYIEQQRERARLVWRDYDPATVPPDYQ
                     DYYKRDQRLAAGPHPGEPTPHEVRERGTSFCVGTPAECIRFLEMYEALGIEEVFMLCA
                     IGPAQHQEVLHTIRMFGEHVIPHFQAKAAA"
     gene            complement(3974..5002)
                     /locus_tag="VHX39_04865"
     CDS             complement(3974..5002)
                     /locus_tag="VHX39_04865"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3990488.1"
                     /translation="MTAAPRFQFGLVVRGQFPASADIAEGFAETIAMVRRADALGFDS
                     LTKTAHYSAHPFQMLQLVPMLARFAAEAPRLRLNAGVLLLPLMSPLHVAEEFATLDVI
                     CGGKIILGVGLGYRDVEFKAFGVPRAQRARRFEANLVAIKRLWTEDKVRMKATHFELD
                     DASCLPKPLQKPHPPIWVGANADPAVERAARLGDCWYIGPAVEITTVERQMELYRRAL
                     DGAGKPFPAELPMRREVFVAKTKAEAIRLCAPYLGAKYEAYHNWRQEIPGDDSGIGQN
                     FEDLIGDRFLIGSPDEVAEQILALRRRVGVNHLVMSTEWAGMPESLATETIEMIATEL
                     FPRVQQGI"
     gene            complement(4999..>5642)
                     /locus_tag="VHX39_04870"
     CDS             complement(4999..>5642)
                     /locus_tag="VHX39_04870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990489.1"
                     /translation="RWGRAWLERGSAECRFAKPVYDGAIAVVTAAEDPAGLELRVESR
                     GVVCATGRAGLPTAAEVPSPVPDSFADAAERAVRPPADEVSLAVGTRLGMAPFAVTPD
                     IAAQYVADVRETLPLYAAEGLIHPVVVLRTCNWVLSRNVVLGPWMHVGSRVQNLSAAR
                     VGEALSVRALVSANYEQKGHWFVDLDALVLADGRPVAQVGHLSIYRPRQIAAA"
BASE COUNT         1110 a         1756 c         1774 g         1002 t
ORIGIN      
        1 cagcttcagg taagccggac ctctggccac ccggcgattg cgtgcagtga gcctggcaca
       61 tgtcattatg tctgcacgcc gtatccgtgg atgtacggcc aggtaatcgt ggaaccgccg
      121 tagccgtcgc gtcgggtccc ccggacaagt gccgggggag acgatgctca gcttgtccgc
      181 aaccgttcgg ccgccgctgc cgactgcgta gacaattcgg catcgatttc cgcgatcgag
      241 cggttgcccg tctcgaagcc cacgaaccag aacgccgcgg cgcccagtac gtaccagaac
      301 gcgaaataat tgaacgccgg gatcaatgcg tccaacgttg cctgcggctt aacgaagttc
      361 gacgatccgg caatcagcgc cagcccggcc ggcccgatga acttgccgag gttgccaacg
      421 ccatagacca gccccattcc gctgccgcgc agacgtgcgg gccacagctc acccatatac
      481 ggcccgacaa tcgagtaatt gccgctgccg aagaaattct gcgcgacaat catcacgaag
      541 aacatcgaca tgccgccgat gaagatgttg tgcatgtaac cggcgagcga catgaatgtt
      601 gctgcgacga ggcagctcag gacaccggac gcacggcggc ccatcgcgtc ggaaatccac
      661 gagcagaaga accggcccgc gatcgctgac aggctgaccc agatcaccag accggacgct
      721 tccgccggcg agattttcag caccatgacg aacaacgtca ccatccacag gccaagcgcc
      781 acgccgccgg tctgagtaag accggtcagg cagccggcga tcaggctgcg cggatacttg
      841 aatacttcgg tccagcgcgt gtgctcgatc gtcggcacca gggccggcag cggaatcgtc
      901 tcgggatcga tttgcaacgc ccaggcaacg gaacggcgag cttcttcggg gcggcccatg
      961 cgcatgagcc aatagggcga ttccggcacc caggcacgga tgtaaagcgt cagcaaagcg
     1021 ggcagcagac cgatggcaaa cagcccgcgc cagccgatga atggtgtggt gtaagcgccc
     1081 aaaagtgctc ccaacagcac acccgccggc agcatcgttg tggtcaggcc ggtcagccag
     1141 ccacgcttac gggtcggcac gaactcctgc accaacgtga tgtcgaccga gtagaggccg
     1201 gtcacgccga ggccgacgat gaagcggcag atcaccagga aaatccatcc gccctgggga
     1261 gtcagcgcca tcgcaccggt ggccagcgaa aaattcaata cggtgaggat catgaccttg
     1321 cggcggccga tcttgtccgc cagccagcca taaaacagcg acccgaaggg cgcgctgatg
     1381 ccggaggcca acaggatcag gcccgattgg ccataggtca aatgccaatc cttgacgatg
     1441 aatgccagca caaacccgat caggaaaaag tcgaagaaat cgagcatgtc gccgagtgtt
     1501 gcggcgattg cgatcttcca ctgattcatg gtcaacttct gctgcttgtc gagcagttcg
     1561 agcatctcgg ttactccctg tacgccgctc gcctgccaga gttcagtccg tgcggcagtc
     1621 aacgttacgt tagtagcact atcttgttcg tcgtagcgcg ttggcgcgtc ggtgacgcgc
     1681 agtcaaaacc gtaacccagc cgatgcctcc cagcaatggg aatatttccg gcccgattgg
     1741 cacgccgccc cttatgcccc acactcccct cccatggacc aattacctgg gctgccagag
     1801 tgggcctttg aaaaggcgga cccgtccccg gacgcagagt tctacgtccc gccacggctc
     1861 gtcacccata tcgacgatgg cgcgatcgcc accgtgacgc aggtctatcg acagaccttc
     1921 ccgtccggcg gcgctgtgct cgacctgatg agcagttggg tgagtcatct cccggacgat
     1981 gtcgagtatg cctcggttgt cggccacggc atgaatgcgc aggaactggc ggcgaaccct
     2041 cggctgtcac gatggtttgt gcaggacctc aatttggagc cggcgttgcc gctggatgac
     2101 gcggcgtttg acggggccgg tctgtgcgta tcggtgcaat atctgcagcg gccggtcgag
     2161 gtgttccgcg aggtggctcg cgtgctgcgg cccgaggcgc gcttcgtggt gtcgttctcc
     2221 aaccggtgct ttccgaccaa agctgtggcg atctggcagg ctctctccgg tccggaccaa
     2281 cagcgtttgg ttgggaacta catgcaggca gcggggttca atacgatcgc cgatcacgct
     2341 gcgacaccga tggacggcga tccgttgtgg gtcgtggtcg gcaaggtctg aggtcttaag
     2401 gagcaagaac catggcaacc aaaccaaggc tggtcggcat caatcacgtg gcaattgaag
     2461 tcgacgatat cgatgcggca ctggaatttt atgggaagat cttcgacttc acgctgcgcg
     2521 gaaagggcga acggaacgcc ttcatcgata tcggcgatca gttcatcaac ctgacaaaag
     2581 caacgccgcg gccatcgtcc gagccggaac gccggcatat cggcttcgtt gtcgatgacc
     2641 ggtcgagcgt gcgagcgagc gctgaagccg ccggcgccac gatactgcca ggcaaatttc
     2701 tggactttct cgatccgtgg ggcaactgca tcgaggtcgt cgaatattcc aacgtgcagt
     2761 ttaccaaggc acctcaggtg ctgcgaggca tgaagctgga gctagccaag aacgagaacg
     2821 cccggcgcga actggcagaa aaaggtctgg gcgaatagcg tagcgaagta gcgctacgct
     2881 gctgccttgg cctggaagtg cgggatgacg tgctcgccaa acatgcgaat ggtgtgcagc
     2941 acttcctggt gttgtgctgg tccgatggcg cacagcatga acacttcctc gatgccaagt
     3001 gcttcgtaca tctccaggaa gcggatgcat tcagccggcg tcccgacgca gaacgatgtg
     3061 ccgcgctcgc gcacctcatg cggcgtcggt tcccctggat gcgggcccgc ggcgaggcgc
     3121 tggtcgcgtt tgtaatagtc ctgataatcg ggcggcacgg tagcgggatc gtagtcgcgc
     3181 cataccagac gtgcccgttc gcgttgttgt tcgatgtacc agccgacgag ttcggttccg
     3241 cgttcggcaa cgacccgtgg atcctcatgg cagaagcctg cggtcatcag cgcagtgcgc
     3301 ggggcgggtt tgtggctcgg gagcgcatcg cgatacagcg ccatcagttg cttcacccga
     3361 tcgggtccgc cttcgccgcc gaacaggccg cccatgccca ggttggcggt gaggcgggcg
     3421 gtttcatcgc tgccacaggc ggaccagagt ggggggtgcg gcttttgcaa cggtttcggc
     3481 agcacctcgc ggcgcggaat ttggaagtag gagccctggt attcgatttc gtcctggctc
     3541 cagatgcgcg gcagtacatc ggcaaattct tgccacatgc cgcgcgtgtc accgagatcg
     3601 gaaccaaacg gcgtgagctg atagggatat cccgtgcggc ccaatccgac atcgacccgc
     3661 ccgtgcgaga gaatgtcgag ggtggccatg cgggcggcca catgcagcgg atgatggatc
     3721 ggtgccaaaa cgacgccaat gccgagcctg atccggctgg tgcgttggct gactgcggcg
     3781 agggtcaggt cgggtgcgct gttgtgcgac cacaccggac ggaaatggtg ctctgagaac
     3841 cagacgctcg aaaagccttg ctgttcggcg taggggattt gttccagcgc ttcgtaaatg
     3901 cgctcggctt cgctggttgc gctccagggt ttggggacct ggatctgata gaacaagcca
     3961 attcgcatcg gagttatatc ccctgttgga cgcgagggaa cagttccgtc gcgatcattt
     4021 caatcgtttc ggtggccaga ctttccggca taccggccca ttccgtgctc atgacgaggt
     4081 gattgacgcc gacccggcgg cggagtgcca ggatttgttc cgcgacctca tcgggcgaac
     4141 caatcaggaa acgatcgcca atcaggtcct cgaagttttg gccaatgccg ctgtcgtcgc
     4201 cggggatttc ctgccgccag ttgtggtatg cctcatactt cgcgcctaga tagggcgcac
     4261 acaggcggat cgcctcggct ttggtcttcg caacgaagac ctcgcgccgc atcggcagct
     4321 ccgctggaaa cggtttgccc gcgccatcca gcgcgcgacg atacaattcc atctggcgtt
     4381 caacggtcgt gatttccacc gctggtccga tataccagca gtcgcccaga cgagcggcgc
     4441 gttcgaccgc cggatcggcg ttggcgccaa cccagattgg cggatgcggt ttttgcaatg
     4501 gcttcggcag gcacgacgca tcgtcgagtt caaaatgggt ggctttcatg cgcactttgt
     4561 cctcggtcca caggcgtttg attgcaacga gattggcctc gaaccggcgt gccctctggg
     4621 ctcgcggcac gccaaacgcc ttgaactcga cgtcgcgata gccgagcccg acacccagaa
     4681 tgatcttgcc gccgcagatg acgtcgagcg tggcaaactc ctcggcaaca tgcagcggcg
     4741 acatcaatgg cagcagcagc acaccggcat tcagccgcag ccgaggcgcc tcagcggcaa
     4801 agcgggccaa catcggaaca agttgcaaca tctggaacgg gtgggcgctg taatgcgcgg
     4861 tcttggtcag cgagtcgaag ccgagcgcat cggcgcgccg caccatcgca atcgtctcgg
     4921 caaaaccttc ggcgatgtcc gcgctggccg ggaattgccc gcggacgacg aggccgaact
     4981 ggaaccgcgg cgccgccgtc acgccgcggc gatctggcgc ggccggtaga tcgacagatg
     5041 cccgacctgc gcgaccggcc gtccgtcggc caggactagc gcgtcgagat cgacgaacca
     5101 atggcctttc tgttcgtagt tggccgacac aagggctcgc accgatagcg cctcgccgac
     5161 ccgcgcggcc gacaggttct gcacccggct gccgacatgc atccacggcc caagcacgac
     5221 gttgcggctc aacacccagt tgcaggtgcg caacaccacg accgggtgga tcaggccctc
     5281 cgcggcataa aggggcaagg tctcgcgcac gtcggcgaca tattgcgcgg cgatgtcggg
     5341 ggtcactgca aacggcgcca tgccgaggcg ggtgccgacc gcgagcgaga cctcgtcggc
     5401 cggcggacgc actgcgcgct ccgcggcatc ggcgaatgaa tcgggcaccg gcgaaggcac
     5461 ctcggcggca gtgggcaagc ccgcccggcc ggtcgcgcac accacgccgc ggctttcgac
     5521 ccttagctcc agccctgccg gatcttcggc tgcggtgacg acggcgatcg cgccgtcata
     5581 gaccggcttg gcgaaacgac attcggcgct gccgcgttcg agccaggcgc ggccccagcg
     5641 cg
//
LOCUS       DATAVD010000268         3142 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_956400, whole genome shotgun sequence.
ACCESSION   DATAVD010000268 DATAVD010000000
VERSION     DATAVD010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3142
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_956400"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..325)
                     /locus_tag="VHX39_04875"
     CDS             complement(<1..325)
                     /locus_tag="VHX39_04875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX3990490.1"
                     /translation="MPDLVQTTRFTLRDRAWQTIYRLAFLLARRWWRLRGQNHEGALV
                     AVWVDQALLLVRSSYRVAWNFPGGSVHQGETPEAAARRELFEEIGLAVPSLIPAGTVQ
                     GIWDNR"
     gene            552..1427
                     /locus_tag="VHX39_04880"
     CDS             552..1427
                     /locus_tag="VHX39_04880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3990491.1"
                     /translation="MYASIRGTRIYFDIEGAGLVPDGPEMCEKPTAFIIHGGPGGDHS
                     GFKPVMSPLADTAQLVYFDHRGQGRSGLADPGGDPARFTLDENVEDMEALRRCLGFGP
                     IVSIGTSYGGMVAMAHAARYPDAVSRLILVVTAAHGGFIPRAQAIVRARGTEAQQRVC
                     ETLWAGGFRSREELRHFYDVMGPLYSLRHDPAAAAATQGRAIHTPEPLNRAFGPDGIL
                     RSFDLRPELGRIIAPTLILCGRHDWICPPEFSREIAGLIPGSRLIELENSSHSVRVDA
                     PDVLLREVTAFIEDL"
     gene            1564..1767
                     /gene="rpmI"
                     /locus_tag="VHX39_04885"
     CDS             1564..1767
                     /gene="rpmI"
                     /locus_tag="VHX39_04885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010669172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEX3990492.1"
                     /translation="MPKMKTKSSVKKRFKITATGKVLAGPGMKRHCLMARTQKAKRSN
                     RGSQTLTEMDAKTVKQWAPYGLV"
     gene            1780..2136
                     /gene="rplT"
                     /locus_tag="VHX39_04890"
     CDS             1780..2136
                     /gene="rplT"
                     /locus_tag="VHX39_04890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008853585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEX3990493.1"
                     /translation="MARVKRGVTTHARHKKVLKQSKGFYGRTSTTYRAARERLEKSLQ
                     YAYRDRRVKKREFRGLWIQRINAAVRQHGLTYSRFINGLKKAGIEMDRKVLAAIAYDD
                     AETFKAIIDKVQAALV"
     gene            2253..>3142
                     /gene="pheS"
                     /locus_tag="VHX39_04895"
     CDS             2253..>3142
                     /gene="pheS"
                     /locus_tag="VHX39_04895"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003622905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEX3990494.1"
                     /translation="MTDDLLALKNETDIALAAATDLRAWDAVRIAVLGRNGSLTGLLR
                     DLGKTPPEQRRDRGAALNQLKDALTSAIETRKTELDAVALDQRLARERIDPTLPPRPR
                     ETGLIHPIARTMEEIAAIFGAMGCTLAEGPDLESDWFNFGALNIPAHHPARADHDTFY
                     LPPQGNEPPPVLRTHTSPVQIRTMLTQKPPIRTIVIGRTYRADHDATHSPMFHQCEGL
                     IIDRDLTLGHLKGCLIDFLRTFFAIADLPVRFRSSYFPFTEPSMEVDIGWNRRTGELG
                     RGDDWLEILGSGMVHPRVLA"
BASE COUNT          591 a         1059 c          951 g          541 t
ORIGIN      
        1 gccggttgtc ccagatacct tggacggttc cggccgggat cagcgatggc acggcgagac
       61 cgatctcctc aaacagttcc cggcgcgccg ccgcctccgg tgtctctcct tggtgtacgc
      121 tgccgcccgg aaaattccag gcaacccgat aggaggagcg gaccagcaac agcgcctgat
      181 cgacccagac ggcgacgagc gcaccttcat ggttttggcc acgcagccgc caccagcgtc
      241 gggcaagcag aaacgccaga cggtagatcg tctgccaagc acggtcgcgg agggtgaacc
      301 gcgtcgtctg taccagatcc ggcatcgaat gacctctcgt tggccgttgt gttggaatgt
      361 ttgcttatgc cgtcgccccc tttaacgcat ccagaacgca gttggcgcac cgacctgcgc
      421 cgcacctttt gggcagctgc tgcaggcgtg acggcctcat ccgactatcg cgccgttctg
      481 cgtcccatgg ttgacgccgg ccctcacgcg acttcttgat gccgcgttcc aaccaccgaa
      541 cggagccacc aatgtacgcc tccattcgcg gcacgcgcat ctatttcgac atcgagggcg
      601 ctggcctcgt gcccgacggc ccggaaatgt gcgaaaagcc cactgcgttc atcatccatg
      661 gcgggcctgg cggcgaccac agcgggttca aaccggtgat gtcgccgctc gccgataccg
      721 cccagttggt gtatttcgac catcgtgggc aaggcaggtc cgggcttgcc gatccgggag
      781 gtgatccggc acgtttcaca ctcgacgaaa acgtcgagga catggaggcg ctgcggcgct
      841 gccttggctt tggcccaatc gtgtcgatcg gcacatccta tggcggcatg gtcgcgatgg
      901 cgcatgccgc acgctatcca gatgcggtct ctcgcctgat cctggtagtg accgccgcgc
      961 atggcgggtt cattccgcgg gcgcaggcga tcgtccgcgc acgtggcacc gaggcgcagc
     1021 aacgggtctg cgaaaccctc tgggccggcg gtttccgctc acgggaggaa ctgcgccatt
     1081 tctacgacgt catgggccca ctttattccc tgcgtcacga tccggcggca gcagcagcga
     1141 cacagggccg ggcgatccac acccccgagc cgctgaaccg cgcctttggt cccgacggca
     1201 tcctgcggtc cttcgacctg cgcccggaac ttggtcgtat cattgcgcca acgctaatcc
     1261 tgtgcggccg gcacgactgg atctgcccgc ccgaattttc ccgggagatc gccggcctga
     1321 tccctggctc ccgtctgatc gaactggaga acagcagcca ctcggtgcgc gtcgacgcgc
     1381 cggacgtgtt attgcgcgag gtgaccgcgt tcatcgagga cctctgaccg aacaccttgc
     1441 agcatccccc acccgccgct ataccccgcg ccttgtctgc gagaccgggc ctgaaatggg
     1501 catgcccggc cgcgacagcc gcccatctct ccagacggag cggtccacat aaaggagagc
     1561 caaatgccca agatgaagac caagtcgtcg gtcaagaagc gattcaagat caccgcgacc
     1621 ggcaaggtgt tggccggccc aggaatgaag cggcattgcc tgatggcgcg cacgcagaag
     1681 gccaagcgat ccaatcgcgg cagtcagacg ctgaccgaaa tggatgcgaa gacggtcaag
     1741 caatgggccc cctacgggct ggtctgaggg agcaccaaca tggcacgcgt caaacggggc
     1801 gttaccaccc acgcccgtca caaaaaggtc ctgaagcaat ccaagggctt ctacggccgt
     1861 acctccacca cctatcgcgc ggcgcgcgag cggctggaga aatcgctgca atacgcctac
     1921 cgcgaccggc gggtgaaaaa gcgcgagttc cggggactgt ggatccagcg catcaacgcg
     1981 gcggtgcgtc agcacggcct gacctactca cgatttatca acggcctgaa aaaagccggg
     2041 atcgagatgg accgcaaagt gctcgctgcc attgcttacg atgacgccga gacgttcaag
     2101 gccatcatcg ataaggtcca ggccgcgctc gtctgacgcg gctttcccct ggacctgatt
     2161 ccgcggccac ccggtctcga tctgggtggc cgttcgcgtt aatgggcgcc gggggatgat
     2221 ccgtcccagc gccgcacgca tgagacaaat cgatgaccga tgacctgctc gcactgaaga
     2281 acgagacgga tatagcgctc gccgccgcga ccgacctgcg cgcctgggat gccgtgcgca
     2341 tcgccgtgct tggccgcaat gggtcgctga ccggattgct gcgcgatctt ggcaagacgc
     2401 cgcccgaaca gcggcgcgac cggggcgccg cgctgaacca gttgaaggac gcgctgacgt
     2461 cagcgattga aacccgaaaa actgagcttg atgccgtggc gctggatcag cggctggcgc
     2521 gtgagcggat cgatccgacc ttgcccccgc gcccacgcga gaccggcttg atccacccga
     2581 tcgcccgcac catggaggaa atcgctgcca ttttcggcgc catgggctgc acgctcgccg
     2641 aggggcccga cctcgaaagc gactggttca acttcggtgc gctgaacatt ccggcgcacc
     2701 acccggcgcg ggctgatcac gacacgttct atttgccacc gcagggtaac gagccaccgc
     2761 cggtgcttcg cacgcacacc tcgcccgtgc aaatccgcac catgctgacg cagaagccgc
     2821 cgatccgtac gatcgtcatc ggacggacct atcgcgccga tcatgacgcc acgcactcac
     2881 cgatgttcca tcaatgcgag gggctgatta tcgatcgcga cctgaccctc ggccacctga
     2941 aaggttgcct gatcgacttt ctgcgcacgt tcttcgccat cgccgacctg ccggtgcggt
     3001 tccgctcgtc atatttcccg ttcaccgaac cctcgatgga agtcgacatc ggttggaacc
     3061 ggcgcaccgg cgaacttggc cgaggcgacg attggctgga aatcctcggc tccgggatgg
     3121 tccatccgcg ggtcctggcc aa
//
LOCUS       DATAVD010000269         2153 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2446493, whole genome shotgun sequence.
ACCESSION   DATAVD010000269 DATAVD010000000
VERSION     DATAVD010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2446493"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(595..1719)
                     /gene="dnaN"
                     /locus_tag="VHX39_04900"
     CDS             complement(595..1719)
                     /gene="dnaN"
                     /locus_tag="VHX39_04900"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019085734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEX3990495.1"
                     /translation="MKLKADRAVLIKALAHVQSVVERRNTIPILANVMIAVRDGKLTL
                     TATDMEIAIVEDVPASSSRNGACTAPAATLYEIVRKLPDGAEVELDHPGGDAQLSLRA
                     GRYDTKLTVLPVEDFPSMTAGSLPHKFSLSALTLRALIDRTKFAISTEETRYYLNGIY
                     LHHADSEGTPVLRAVATDGHRLARVEEPLPDGAATMPGVIIPRKTVNELRKLLDEVTG
                     NVEVALSDTRIQFHADQMLLTSKLIDGTFPEYERVIPRGNDKVLRVGKKDFADAVGRV
                     AAISSERSRPVKLSLARDLLVLTASNPEQGTATEELDADHVKYDAGPLEIGFQARYLN
                     DITDQIPEQVEFRFADGSAPTVVQDAGDSSALYVLMPMRV"
     gene            complement(1921..>2153)
                     /locus_tag="VHX39_04905"
     CDS             complement(1921..>2153)
                     /locus_tag="VHX39_04905"
                     /inference="COORDINATES: protein motif:HMM:NF014025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEX3990496.1"
                     /translation="LFAGLGWFFLGMTAAAVAMTAVIWVTYAYADRLTRMMGPTGTRT
                     ITRVSAFLLLCIGVQILITGVEDVLGPLLAGR"
BASE COUNT          395 a          753 c          631 g          374 t
ORIGIN      
        1 cccgatgatc catgcctaat gtcctgcccc agaagttcgt cgcatcgtgc ggcgggcttc
       61 tgggaccagc aggccactga aaacaaccag ccagtatccg atcgcgggaa agcgcgagtc
      121 accagttgac tgcgatgtcc cgcctgaacc ggttactcag acaacactgc gacgtagcgc
      181 gcttctctga tgcgcaatac tggcgtgatc ggccaggtcg gaacgccgcc cggccgcgcc
      241 tcgtcatgcc gacggcggtc ggcatccaca ccttttgcct ttccaatcag acgcatggat
      301 ggcggccgtc acccaccatg acggtgagag gccggcttcg gtgtgtcact ctttcggcgg
      361 gctggtataa ggcgccacca ggacttgccg ttgggctgga gcgattacgc gtcaggtttg
      421 ggacagtttt tgcgtgccgg atgtgcaatt acagtggagg ggcacgtagc ccagcgtcgc
      481 ggcggtcggg caggtccacc cgaccgcgaa ggatgcttct gtcaggatcg gaccgctagg
      541 tgatgatccc gcgatccggg cgggtaacga accgtcgccg aggtttgtcc cgcactacac
      601 ccgcatcggc atcagcacat acagcgcact ggaatcaccc gcatcctgca ccaccgtcgg
      661 cgccgatccg tcagcgaagc gaaactccac ctgctcgggg atctggtcgg tgatgtcgtt
      721 cagataccga gcctggaacc cgatctccaa cggaccggcg tcatacttca catggtcggc
      781 gtccagttcc tcggtcgccg tgccctgttc cggattggac gcggtcagca ccagcaggtc
      841 acgcgccagc gacagcttca ccggccgcga ccgttccgag gaaatcgccg ccacgcgtcc
      901 gaccgcatcg gcgaagtcct tcttccccac ccgcagcacc ttgtcgttgc cgcgcggaat
      961 aacccgttca tattccggaa aagtcccgtc gatcagcttg ctggtcagca gcatctggtc
     1021 ggcatggaac tggatgcggg tgtccgatag cgccacctcc acattgccgg tgacctcgtc
     1081 caacagcttc cgcaactcgt tcaccgtctt ccgagggata atgacgcccg gcatcgtcgc
     1141 cgctccatcc ggcagcggct cctcgacgcg cgccagccga tgaccgtccg tggcgaccgc
     1201 gcgcagcacc ggcgtgccct cgctgtcggc gtgatgcagg tagatgccgt tcaggtagta
     1261 gcgcgtctcc tccgtgctga tcgcgaattt cgtccggtcg atcaacgccc ggagcgtcag
     1321 cgcggacagg ctgaacttgt gcggcaggct gcccgcggtc atcgacggaa aatcctcgac
     1381 cggcagcacc gtcagcttcg tgtcgtaccg cccggcccgc agcgacaatt gcgcatcgcc
     1441 gccgggatga tccagctcga cctccgcccc gtcgggcagc ttgcggacga tctcatacag
     1501 cgtcgccgcc ggcgccgtgc aggcaccgtt gcgcgacgat gacgccggca cgtcctcgac
     1561 aatggcgatc tccatatccg tcgcggtcag cgtcagcttg ccgtcccgca cggcgatcat
     1621 gacgttcgcc aggatgggga tggtgttgcg ccgctccacc acgctctgga cgtgggccag
     1681 cgccttgatc aagacggcgc ggtcggcctt gagcttcatg gtctgtttcc tacttgggtc
     1741 cggccgccgc ttctgatccc cgcacggcga ggaagcaagc gaatcgcaca acggagtgta
     1801 gcaagccggc cgaaggtccg ccaaggaccg tcatgcggtt cgcggccgtc gaggcaaggt
     1861 ttcccgaaca accccggcaa accggccact acggggcgaa cttcaccccg accaggcacg
     1921 ctatcgcccc gccagtaacg gccccagcac atcctcaacc ccggtgatca ggatttgcac
     1981 cccaatgcac agcaacagaa acgccgacac ccgcgtgatc gtccgcgtcc ctgtgggacc
     2041 catcatccga gtcaaccgat cagcatacgc ataagtaacc cagatcaccg ccgtcatcgc
     2101 caccgccgcc gcggtcatcc ccaggaagaa ccatcccagc ccggcaaaca acc
//
LOCUS       DATAVD010000270         4190 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_582886, whole genome shotgun sequence.
ACCESSION   DATAVD010000270 DATAVD010000000
VERSION     DATAVD010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4190
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_582886"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..612)
                     /locus_tag="VHX39_04910"
     CDS             complement(<1..612)
                     /locus_tag="VHX39_04910"
                     /inference="COORDINATES: protein motif:HMM:NF013482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3990497.1"
                     /translation="MSNAEMLQVGRPVSRVDGRLKVTGQAQYAAEYSSPDLLYGYIVS
                     STIAVGRITSIHADAARAMPGVVEIFTHENHGKAARLDRSWRDEVAPPGHPFRPLHSE
                     RILFDGQPIALVVADSFEAARDAASLIRVDYALGPHGTELEKKRSQAYVPPEKRSGIP
                     PPPDPRGDAEDAFSKAAVKISRDYRVSAEHHNPMEMFASTCVFE"
     gene            complement(621..1634)
                     /locus_tag="VHX39_04915"
     CDS             complement(621..1634)
                     /locus_tag="VHX39_04915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEX3990498.1"
                     /translation="MNRFEYVRADTIADAVSALAAPGARALAGGTNLVDLLKYDVAKP
                     SLVVDINRLPLKQIEQTPDGGLTIGALVTNSEVAWEPRVAKGYPLLASAILAGASPQL
                     RNAATTGGNLLQRTRCYYFYDPSTPCNKRDPDSGCSAIGGVNRIHAILGASDACIAVH
                     PSDMCVALAALDAVVNVEGGDGKRSIPFSDFHRLPGNEPQHDNTMRPGELIVSVSLPP
                     TDFGRHHSYLKVRDRLSYAFALVSVAAALKVENGRIGEARVALGGVAHKPWRDFDAEQ
                     GLKGQKPETTAFAAFAEQVLRQAKGQGANDFKIALARSTIVRALRQAAAGTPQQQSEK
                     SIR"
     gene            complement(1631..2095)
                     /locus_tag="VHX39_04920"
     CDS             complement(1631..2095)
                     /locus_tag="VHX39_04920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX3990499.1"
                     /translation="MNGVRHELTVGPWVTLLDLLRERLQLTGTKKGCDQGQCGACTVL
                     IDGVRINSCLVLAVSRDGAEITTIEGLAAGAELHPLQAAFIEHDAFQCGYCTPGQICS
                     AAGLLAEGHAHSRAEIREHMSGNLCRCGAYTNIADAIEDVLKQRASAQEAAE"
     gene            2466..3119
                     /locus_tag="VHX39_04925"
     CDS             2466..3119
                     /locus_tag="VHX39_04925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEX3990500.1"
                     /translation="MQIFRPGANAVATALLASLGVIPVLAAGLAYQIADSPYVTNQNV
                     TLDQPVPFSHEHHVGGLGLDCRYCHTSVEKARFAGLPPTETCMTCHSQIWTNAEMLAP
                     VRTSLAENIPIRWHRVNRLPGYVYFDHSVHVAKGVGCSTCHGPIHEMKLTRQAQPLTM
                     QWCLDCHRDPARSIRPPEAVFDPDWSAPENNEESGRKLMAVYHIQTDHLTDCSICHR"
     gene            3107..>4190
                     /locus_tag="VHX39_04930"
     CDS             3107..>4190
                     /locus_tag="VHX39_04930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S ferredoxin"
                     /protein_id="HEX3990501.1"
                     /translation="MSPVNELCVKGSQFFSRGPGALNRRQALSLLASGIATGLAACSK
                     PTDPIIPYVSMPEGLVPGGKLKFATTLPLSGFGRGVIVTSIDGRPIKVDGNPRHPASL
                     GATDVFAEAAVLSLYDPDRSRTILNDGAISSQDAFKLALQLQLQQLHKSGGEGFRLLT
                     GRVTSPTLLRQIDDLLQLFPKAAWHAYEPIDEDNESSGTALAYGRPLRAVPRLEKVQV
                     LLTLDADPLGQGPDQLRNARGFSVRRSPQAGGFSRIYSVEAAPTLTGAKADHRIALHP
                     HLMGEVAIAVANSMGAGLREAVLPEPVMRFARQAAADVSANPGSGLVLAGRSLSSETH
                     ALVHWINAHVQAPVDLIDPVDRTVGGR"
BASE COUNT          807 a         1303 c         1250 g          830 t
ORIGIN      
        1 ctcgaacacg catgtagagg caaacatttc catcggattg tggtgctcgg cgctgacgcg
       61 atagtcgcgg ctgatcttga ccgccgcttt tgaaaacgcg tcttcggcgt cgccgcgggg
      121 atcgggtggc ggagggattc cgctgcgctt ttccggcggg acataggcct gtgagcgttt
      181 cttttccaat tccgtaccgt gtggcccaag ggcataatcg acgcgaataa gggacgccgc
      241 atcgcgcgcg gcctcaaagc tatcagccac gaccagcgcg atcggttgac catcgaacag
      301 gatccgctcc gaatgaagcg gccgaaacgg atggccggga ggcgccactt cgtcgcgcca
      361 gcttcgatcc agccgggccg ctttgccgtg attttcgtgc gtgaatatct cgaccacgcc
      421 gggcatcgcg cgtgcagcgt ccgcatggat ggaggtaatt cgtccgaccg caatcgtgct
      481 gctgacgata tagccataga gcaggtccgg ggatgaatat tccgcagcgt attgcgcctg
      541 tccggtaacc ttgaggcgac catcgacgcg gcttaccggc cggccgacct gtagcatttc
      601 ggcgttcgac atcgtggctc ctaccttata gacttctctg attgttgttg cggcgtaccc
      661 gcagcggcct gccgtaacgc ccggacaatg gtgctccggg caagggcgat cttgaagtcg
      721 ttggcgccct gccctttcgc ctgccgcagg acctgctcgg caaatgccgc gaatgccgtt
      781 gtctccggct tctgaccttt taaaccttgc tcggcatcga agtctcgcca tggcttgtgc
      841 gcgacgccac ctaacgcaac acgcgcctcg ccgatccgac cattctcgac ctttaacgcg
      901 gcagcgaccg ataccaacgc aaacgcataa gagagccgat cccgcacctt gagatagctg
      961 tgatggcgtc cgaaatcggt cggcggaagc gagaccgaaa cgatcagctc gccggggcgc
     1021 atggtgttgt cgtgttgcgg ttcgttcccg ggcagccggt gaaaatccga aaacgggata
     1081 ctgcgttttc cgtcgccacc ctccacgttg actacggcat ctagtgctgc caatgcgacg
     1141 cacatatccg atggatggac cgcgatgcag gcgtcgctgg cacccaggat ggcatggata
     1201 cgatttaccc cgccgatcgc cgaacatccg ctgtctggat cgcgcttgtt acatggcgtg
     1261 gagggatcat agaagtagta gcaacgggtg cgctggagca agttgccgcc ggttgtggcc
     1321 gcgtttcgca actgcggcga agcacccgcc aggatcgcgc tcgccaatag tggatagcct
     1381 tttgcgacgc gaggctccca cgccacttcg gaatttgtca ccagcgcgcc gatcgtcagc
     1441 ccgccatccg gagtttgctc gatctgcttg agcggcagcc ggttgatatc gaccacgagc
     1501 gatggcttgg cgacatcata cttcagcaga tcgacgagat tggtaccgcc ggcgagagcc
     1561 cgcgcgccgg gcgcggccag agcacttacc gcatcggcga ttgtatccgc acggacatat
     1621 tcgaaccggt tcattccgct gcctcctgcg ccgaggcgcg ttgtttcaac acatcttcga
     1681 tggcatcggc aatgttggta taggcgccgc agcggcagag gttgccgctc atgtgctccc
     1741 ggatttcggc gcggctgtga gcgtgtcctt cagccagcaa tcctgccgcg gagcagattt
     1801 gccccggcgt gcagtagccg cactggaacg catcatgctc gataaaggca gcctggagcg
     1861 gatgtagttc ggctcccgcc gccagaccct caatggtcgt aatctcggcg ccatcccgcg
     1921 acacggccag gaccagacag gaattgatcc gaaccccgtc gatcaagacg gtgcaggcgc
     1981 cgcactgtcc ctgatcacag cccttcttcg ttccggtaag ctgcaagcgc tcgcgcagca
     2041 ggtccagcaa ggtgacccag gggcccaccg tcaattcgtg acggacaccg ttgatgacga
     2101 acgataccgg aaaaccggcg gttgctgctg agcggtccac ggggtcctcg ctatgcgtct
     2161 gaactgaatg agaaccagtt cgaccgttta gcgttccgca ctaaaggagt gagcgaatga
     2221 cgcaggcgag acccatcagg gcctaccgca aacagcggca attgctcgcg cggtaacctg
     2281 agatgtgcgt tgagcgacat aggcgagggt ccgagcctgt ctgaaacgga aatgaggcgc
     2341 tggcgtagcg atggaaccgt ttcggtagga aatcgttgca attttgtgaa cgggttcttc
     2401 gcggatagat cgattgccgt gcttacgcgg gcgcggcggt tgcgcattct tgaaaagacg
     2461 gacgcatgca gatcttccgt ccaggggcga acgctgttgc aactgcgctg ctggcctcgc
     2521 tcggcgtgat ccccgtttta gccgccggtc ttgcctacca gatcgccgat tcgccttacg
     2581 tcacgaacca aaacgtaacc ctcgaccagc cggtgccttt cagccatgaa caccatgtcg
     2641 gcggtctggg tctggattgc cgctactgtc atacgtcagt ggaaaaggcg cgtttcgcgg
     2701 ggctgccacc gaccgaaacc tgcatgacct gtcattcgca aatctggacc aatgccgaga
     2761 tgctggcgcc ggtgcggacg agcttggctg agaacatccc tatccgttgg caccgcgtca
     2821 accggctgcc aggctacgtg tatttcgacc attcggtcca tgtcgccaaa ggcgttggct
     2881 gttccacatg ccacggcccg atccacgaaa tgaagctgac ccgccaggcg cagcctctga
     2941 ccatgcaatg gtgtctcgat tgccaccgcg accctgccag gtccattcgg ccgccagagg
     3001 cggtgttcga tccggactgg agtgcacctg aaaacaacga ggaatccggg cgcaagttaa
     3061 tggccgtgta ccacattcaa accgaccacc tcacggattg ctcgatatgt caccggtgaa
     3121 tgaactctgc gtcaagggtt cgcaattctt ctcacgtggc cccggcgcgc tcaaccggcg
     3181 gcaagcgctt agcctgttgg caagcgggat tgcgactggc cttgccgcct gcagcaagcc
     3241 caccgatccg atcattccct atgtcagcat gcccgagggc ttggtcccgg gcggcaagct
     3301 gaaatttgcg accacgttac cactctcggg ctttggacgc ggcgtgatcg tcacatctat
     3361 cgatggccgc ccgatcaagg tcgacggcaa cccgcggcat cctgccagcc tcggagccac
     3421 cgacgtcttt gccgaagcgg cggttctgtc cctctatgat ccggaccgct cgcgcacgat
     3481 cctgaacgat ggcgcaattt catcgcagga tgctttcaag ctggcgcttc agcttcaact
     3541 tcaacagctg cacaaatccg gcggtgaagg ttttcggcta ctcaccggac gcgtaacctc
     3601 gcccacgctg ttgcggcaga tcgacgatct gctgcagtta tttccgaagg cagcctggca
     3661 tgcctatgag ccgatcgacg aagacaacga aagttccggc accgcactgg cttacggccg
     3721 accactgcga gccgtgccgc gactggaaaa ggtccaggtt ttactcaccc tcgacgcgga
     3781 cccgctgggc caaggccccg atcagctacg caacgcgcgt ggtttctcgg tccgccgatc
     3841 gccgcaagcc ggtgggtttt cgagaatcta cagtgttgag gcggcaccga cgctcacggg
     3901 tgccaaagcg gatcatcgaa tcgcgctgca tccgcatttg atgggcgaag tggcgatcgc
     3961 tgtcgccaat tcgatgggcg ccggattacg cgaagcggta ctgccggagc ccgtgatgcg
     4021 cttcgctagg caagcagccg cagacgtctc ggcaaaccca ggcagcggtc tcgtccttgc
     4081 aggacggtcg ctctcatccg agactcatgc gctggtgcac tggatcaatg cccatgtgca
     4141 agcaccggtc gacctgattg accccgttga tcgaaccgtc ggcggccggc
//
LOCUS       DATAVD010000271         2173 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2258653, whole genome shotgun sequence.
ACCESSION   DATAVD010000271 DATAVD010000000
VERSION     DATAVD010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2173
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2258653"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(304..1353)
                     /locus_tag="VHX39_04935"
     CDS             complement(304..1353)
                     /locus_tag="VHX39_04935"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3990502.1"
                     /translation="MELGIYHEFPVLPGRSQAECFAAGFDIVDASEEYGLDVMWLAEI
                     HFDKRRCLGASPLILGTAIAARTERIKIGTSVQVVPLANPLRIAEESAILDHVSKGRL
                     IFGVGRSGVVKTYEAMNIAYSESKDREVECLEIIQRAWQEDNFSYKGKFYDIKDVTVV
                     PHPVQQPTPEIRLAAASVETFPAAGKAGQGLFLSARHEDVRMHKQHIDVYRKAWTDAG
                     HPGQAPVYLRCPGFVAKTDAAAQEAYRPTLMQHFQNQNRLLSDSARRQNSPPDHPRFK
                     TAQRLTEITFEEVLRGSVFIGSPDTVVAKLKDLQRDIGLSGVQLETNCAGLADHAAER
                     EAIRLLAQEVKSAFR"
     gene            complement(1601..>2173)
                     /gene="istB"
                     /locus_tag="VHX39_04940"
     CDS             complement(1601..>2173)
                     /gene="istB"
                     /locus_tag="VHX39_04940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011930761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEX3990503.1"
                     /translation="RLRYARLRHQAVVEDVDYRAARGLDRALFHKLAAGEWIDAHDNL
                     ILCGPTGVGKSWLACALAHKACRDNRSVLYQRVPKLFADLALARGDGRHARIMPSLNG
                     AQLLILNDWGLEPLDGGARRDLYEILEERYGRRSTILTSQVPIDKWHEVIGDPTYADA
                     ILDRLVHNANRIDLAGDSLRRTRPKSAVKD"
BASE COUNT          393 a          653 c          700 g          427 t
ORIGIN      
        1 tgatcccgaa agcaacatag gaaaacccac tacagccccg gtttctgcca atacagaccg
       61 ataccagccg cactggctgt gacaatgatg cctcgcgtgc cacaacgccg actacaacga
      121 aattgttcgg tgtttcctta atggacttag taaaaggtcc gcggccacct gacacgggcg
      181 ccggggcgac cgacaaacgg ccgttaccgg cgcattacgg tcagcttcac cagactagcc
      241 attgtcgcaa gctggcccca ctcccgtatt cacgatcgtc gccgcgtagg ctcgaacccg
      301 cgttcagcga aacgccgact taacctcctg cgccagcaac cggattgcct ctcgctccgc
      361 cgcgtgatcg gcgaggcccg cgcaattcgt ttccagttgc acgcccgaca gcccgatatc
      421 gcgttgcagg tctttcaact tcgccaccac cgtatcgggt gagccgataa ataccgaacc
      481 gcgcaaaact tcctcgaacg taatttcggt gaggcgctgc gcggttttga agcgcgggtg
      541 gtccggcggg ctgttctgcc gccgggcgga gtcggaaagc aggcggtttt ggttctggaa
      601 atgctgcatc agggtgggcc tataggcctc ctgcgccgcc gcatcggttt tggcgacgaa
      661 acccggacaa cggagataga cgggcgcttg cccgggatgc ccggcgtcgg tccaggcttt
      721 gcggtagaca tcgatgtgct gcttgtgcat ccgcacatcc tcgtgccgcg cggacaggaa
      781 caggccctgg cccgccttac cggccgcggg gaaggtttcg acactcgccg ctgcgaggcg
      841 gatttcgggc gtcggttgct gcaccgggtg cggcacgacc gtgacgtctt tgatgtcgta
      901 aaacttgccc ttgtaggaga aattgtcctc ctgccaggcg cgctgaatga tctcgaggca
      961 ctcgacctcg cgatccttgc tttcggaata cgcgatgttc atcgcctcgt aggtcttgac
     1021 gacgccgcta cgcccgacgc cgaagatcag ccggcccttg gagacgtggt ccaggatcgc
     1081 cgattcctcg gcgatgcgaa gcgggttcgc caaagggact acctgcacgc tggtcccgat
     1141 cttgattcgc tcggtgcggg ccgcgatcgc ggtgccgagg atcagcgggc tggcgccgag
     1201 gcagcgccgt ttgtcgaaat gaatttccgc gagccacatc acatcgaggc cgtattcctc
     1261 gctggcgtcg acgatgtcga acccggcggc gaagcattcg gcctggctgc ggccgggcag
     1321 caccggaaac tcgtgataga tacctaattc cattaaatgg gaccttcaca acacggtctt
     1381 atccgacatt caccagattg cgagcggtga cgacgccacg gtcgctgtct tcggcgattt
     1441 gagcaacggc aaatcgcgcg ctgcataccc ggcaggctgc ggattccgac gatgtcgctc
     1501 ggtcattccg agatcatgtc gctcgctgtt ccgacatgat gtcgcccgct tgagggggcg
     1561 tcttgctggt agttgtttgt ggcgggaagc aggctgcggg tcaatccttc acggctgatt
     1621 ttggtcgggt ccgtcgcagg ctgtcgccgg ccagatcgat gcggttggcg ttgtggacga
     1681 ggcggtcgag gatggcatcg gcgtaggttg ggtcaccgat gacctcgtgc catttgtcga
     1741 taggcacctg gctggtcagg atggtcgagc ggcggccgta gcgttcttcg aggatctcgt
     1801 agagatcgcg tcgggcaccg ccgtcgagcg gttcgaggcc ccaatcattg aggatgagga
     1861 gctgggcgcc gttgaggctt ggcatgatgc gggcatggcg gccgtcgccg cgggccagcg
     1921 cgagatcggc gaagagtttg gggacgcgct gatacagaac ggaacggttg tcgcggcaag
     1981 ccttgtgagc gagagcacag gcaagccaac ttttgccgac gccggttggc ccgcacagga
     2041 tcagattgtc gtgcgcatcg atccattcgc cggcagcaag cttgtggaac agggcgcgat
     2101 cgaggccgcg cgcggcacgg taatcaacgt cctcgaccac ggcctggtgg cgcaatcggg
     2161 catagcgcag ccg
//
LOCUS       DATAVD010000272         1518 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3002866, whole genome shotgun sequence.
ACCESSION   DATAVD010000272 DATAVD010000000
VERSION     DATAVD010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3002866"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1518
                     /locus_tag="VHX39_04945"
     CDS             <1..>1518
                     /locus_tag="VHX39_04945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990504.1"
                     /translation="SWGLIKGQDGNLYMGSYNEGKLMCFDPHTKTWLPMPQASAEFRK
                     QNPIITDLIQAPDGSIYFGTFPGAHLARYDPRTKTVEDLGKVADEKYVRWLAVTRDGI
                     ILCGVGPQHARVIAYNPRTRSFRTLTPKEDQTRGAFSKPLVSNRYVVEAQHSPGGKVL
                     VYDPATLNLLHVYRVPLRNNGSGNQSIFTLVDPTHVLYQDDDLRLMQLDVATGARSVV
                     FADPDTAANNRWYFDSEGNVLGLLVQSYVYLNRSTGKVIHEPIPIRHPAQDILWLNTA
                     PDGTIYGGPPFGQNMFAFDPKSHRLTSYDQVVDRTGEIYYGIPYDGKIYNISYAEGIL
                     SVFDPRRAWDPGLHSASNPRTVLFLGDDQYRPVGGIHLGPGHRMYIGTQPDYGLLGGA
                     LSIFDPSTGSIETLRNIIPGEEISAITADDRYVYCEADRSGGMGAVPTATHVHFFVWD
                     PANRRIIFDHPLPKDGGFDSIATVNGHAYFVSGSAVMDYDATGRSLSTLLRLDHPA"
BASE COUNT          300 a          494 c          433 g          291 t
ORIGIN      
        1 tcctggggcc ttatcaaggg gcaagatggc aacctctaca tgggttctta caacgaaggc
       61 aagctgatgt gcttcgatcc acacacgaag acctggctgc cgatgccaca ggcgtccgcg
      121 gagtttcgca aacagaatcc catcatcacc gatctcatcc aggctcccga cggcagcatc
      181 tatttcggaa cgtttcccgg agcgcatctc gcgcggtacg atccgcgcac aaaaacggtg
      241 gaagatctcg gcaaggtcgc ggatgagaag tacgttcgct ggctcgccgt gacgcgcgat
      301 ggaatcatcc tgtgcggcgt ggggccgcag cacgcaagag ttatcgcata caacccgcgc
      361 acgcgcagtt tccgcactct cacgccgaaa gaggatcaga cgcgcggcgc gttctcaaag
      421 cccctcgtca gcaatcgata tgtcgtcgag gcgcaacaca gccccggtgg caaggtgctg
      481 gtctacgatc cggcaacgct gaacctgctg catgtgtatc gcgtgccgct gcgcaacaat
      541 ggctcgggta accagtcgat cttcactctc gtggacccca cgcacgtcct ctaccaggac
      601 gacgatctcc ggctcatgca actggacgtc gcgacgggag cacgctctgt cgtctttgcc
      661 gatccagata ccgcggcgaa caatcgctgg tacttcgaca gcgagggcaa tgtgctgggg
      721 ctgctggtgc agagctacgt gtacctgaat cgctcgacgg gcaaggttat ccacgagccg
      781 attcccattc ggcacccggc gcaggacatc ctgtggctca acaccgcgcc ggacggaacg
      841 atttacggcg ggccgccctt tgggcagaac atgttcgcct ttgatccgaa gagccaccga
      901 cttacctcgt acgatcaggt cgtcgaccgc acgggtgaga tctactacgg cattccttac
      961 gacggaaaga tttacaacat cagctacgcg gaagggattc tctccgtctt cgatcctcgc
     1021 cgcgcatggg acccgggcct gcactccgca tccaacccgc ggaccgttct cttccttggc
     1081 gacgaccagt accgtcccgt gggcgggatt cacctgggcc ccggacacag gatgtatatc
     1141 ggtacgcagc cggactacgg actgctcggc ggcgcgctct ccatcttcga tccctctacc
     1201 ggatcaatcg agacgctccg caatatcatt cccggcgagg agatctccgc tatcacggcg
     1261 gacgaccggt acgtttactg cgaggccgat cggtccggcg ggatgggcgc cgttcctacc
     1321 gcgacacacg tccatttctt tgtgtgggac ccggcgaatc gccgtatcat cttcgaccat
     1381 ccgctgccga aggatggcgg ctttgactca attgccacgg tgaacggaca cgcctacttc
     1441 gtcagcggca gcgccgtcat ggactatgac gccacggggc gctcgctgtc cacgctgctt
     1501 cgactggacc acccggct
//
LOCUS       DATAVD010000273         1537 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3563726, whole genome shotgun sequence.
ACCESSION   DATAVD010000273 DATAVD010000000
VERSION     DATAVD010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3563726"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..993
                     /locus_tag="VHX39_04950"
     CDS             <1..993
                     /locus_tag="VHX39_04950"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX3990505.1"
                     /translation="YLSEPAFVGEVRTGSLFNVPALLIVMLLSWLLVRGVKESAGANN
                     VMVLIKVAAVLIFVLGAAHAVKSTNVHPFLPNGFQGVLTGSAIIFFTFIGFDSVSTAA
                     EECKNPQRNMPVGIIGTLVVCTILYTSVAFVLTGIVSWKTLDNAAPVANALHAIGMDR
                     LRFVVTLGALLGMLSSLLVYQYGQARVWFAMSRDRLLPDVFSRVHKKSQTPYISTWIA
                     GLAVGIPAGLWDIDTFADLSNIGTLFAFVVVSAGVIILRHTQPGRQRSFRVPFSPFTP
                     LLAIVCCFGLMLGLPLETWIRFVVWLLIGLVIYFAYSRHRSSLQQPALEKTKIA"
     gene            1022..>1537
                     /locus_tag="VHX39_04955"
     CDS             1022..>1537
                     /locus_tag="VHX39_04955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990506.1"
                     /translation="MKKLTPQYAVLALLLLWALLAEGAFSIHFVYGMAVAGRQVPFPF
                     RLHSYTNRIESVMAEYQNGPLRRGDEILGVNGRELRGRQDLDRFRNELQAGQLLRVSV
                     RRKYSAGTSDKTYFIRLQDVSSRTLGWVALLTLMLLPFSCLVIGFFIAFVRPDDGLAW
                     ITMAMLASFGQI"
BASE COUNT          285 a          436 c          427 g          389 t
ORIGIN      
        1 tatctttcgg aacccgcatt cgtcggtgag gtgcgaacag gaagcctgtt caacgtcccg
       61 gcgcttttaa tcgtgatgct tttgagctgg ctgctggtcc ggggcgtcaa agagagcgcg
      121 ggcgcaaaca atgtaatggt gctgatcaaa gtagcggcgg tactgatatt tgtactcgga
      181 gccgctcatg ccgtgaagtc cacaaacgtg cacccctttt tgcctaacgg gtttcagggc
      241 gtccttacgg gatcggcaat cattttcttc acgttcatcg gtttcgattc ggtctcaacg
      301 gccgctgaag aatgtaagaa cccccagcgc aacatgccgg tgggcatcat tggaaccttg
      361 gtggtctgta cgatccttta tacatcggtg gcgtttgttc tcaccgggat cgtaagctgg
      421 aaaactctgg ataatgcggc acccgttgcg aatgcgctgc acgctatcgg catggatcga
      481 ctgcgcttcg tggtcaccct gggagcttta ctcgggatgc tatcttcgct gctggtttat
      541 caatatggac aggcccgcgt ctggtttgcg atgtcgagag accgtctgct cccggacgtt
      601 ttctcgcgcg ttcacaagaa gtctcagacg ccttacatca gcacctggat cgccgggctc
      661 gcagtgggaa ttccggcggg actgtgggac atcgatacgt tcgccgacct ctcgaacatt
      721 ggaactctat ttgcattcgt tgtcgtatct gctggtgtga tcatactgag gcatacgcag
      781 ccggggcggc aacgttcctt tcgcgttccg ttctctccat tcacaccgct actcgccatc
      841 gtatgttgtt tcggcctcat gctcggtctg cctctcgaaa catggatcag atttgtcgtc
      901 tggctcctta tcggcctagt catctacttt gcctacagcc gtcaccgcag ttctctgcag
      961 caaccggcgc tcgaaaaaac gaaaatagcc tgagcgcgtc tgttagtaac tggccgtctt
     1021 catgaaaaag ctgaccccgc agtacgcggt gctcgccctg ctgctgcttt gggcgcttct
     1081 cgcggagggc gcgttctcca tccatttcgt ttatggcatg gcggtcgccg ggagacaggt
     1141 cccgtttccc ttccgtcttc actcctacac taaccgcata gaaagcgtga tggccgagta
     1201 tcagaacggg ccgttgcgac gtggcgacga gatacttggc gtcaacggaa gggagttgcg
     1261 aggaagacaa gacctcgacc ggtttcggaa cgagttacag gcggggcaac tcctgcgcgt
     1321 ttcggtgcgc cgtaaatact ccgccggcac gtcggacaaa acctatttca tccgactgca
     1381 ggatgtctcg tcccgcacac tcggatgggt agcgcttctg acgctgatgc tcctgccgtt
     1441 cagttgcctg gttattggct tcttcatcgc cttcgttcgg cccgatgacg gactggcctg
     1501 gatcaccatg gccatgctgg cttccttcgg acagatc
//
LOCUS       DATAVD010000274         3861 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_583230, whole genome shotgun sequence.
ACCESSION   DATAVD010000274 DATAVD010000000
VERSION     DATAVD010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3861
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_583230"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1056)
                     /locus_tag="VHX39_04960"
     CDS             complement(<1..1056)
                     /locus_tag="VHX39_04960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990507.1"
                     /translation="MPRFLALWATALVAMLAVVAGFNAAINPYEVFAWHRFPGINEYK
                     PGTRNHVALAKAWQVERARPVTVILGTSRAYLAMDAASPAWPDADRPVYNYGTPGSNM
                     SEVLFRELQQAWATGGLRHAVAILDVPAFLTPDPPLSRGPDEKRLTLLDDGTPNPDRR
                     AQYFSDAFLSVLTMGALIDAVHTVLARHGGNTVLDLRPDGNANAADFIDVARAEGMNA
                     LFTQKDQYDLSRIAGFKRVLGDWHGPMPNIGVLQRMIGFCLQHDISLTLILGASHVDQ
                     MEIYRQAGLWPYIEKLKVDLAQLVADAHSDKITAWDFVEYAPYTTETVPPQGDRATRL
                     RWFWEPVHFQRALGEIML"
     gene            complement(1056..2678)
                     /locus_tag="VHX39_04965"
     CDS             complement(1056..2678)
                     /locus_tag="VHX39_04965"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HEX3990508.1"
                     /translation="MLFNSYEFIFGFLPAVLIGFYALGARRREWALLWLTLASLGFYA
                     WWRPINVLLIAPSILINLGLARLIERHREARPALARAVLICGIGFNLCFLGYFKYIMF
                     LRGAVNDVFGTGLVLTRIILPLGISFITFQKIAFLADVHAGRVTAFTFRDYALFVLFF
                     PQLIAGPIVHYREMMPQFRAISTRFNAEDAAVGVTLFFMGLAKKLVLADPMALVVAPL
                     YARAANGEALAWADGWIAALGFTFQIYFDFSGYTDMALGLARFFGIKLPVNFNSPLKA
                     ASIIEFWQRWHVSLTRFLTAYIYNPLSLHLARKRMAAGKPGFGGRDTTVASYSTLLLL
                     PTMLTMFISGLWHGAGYTYIVWGLMHGAMISINHAWRLIRPRIWPGAKDHPRLLAGSG
                     FALTFVSVAVAMVMFRAPTVRAAGSIWSDLVGVHGVTLPEGLLARLGPVAHWLHTVGV
                     QPDSSSGSQMLEGLLRVGVLLAIALGLPNTLQILARYEPALGVRPAKQEPWLVRAAQW
                     TPSGSWAIGLAAVSAAGILSLGQLSEFLYWQF"
     gene            complement(2910..>3861)
                     /locus_tag="VHX39_04970"
     CDS             complement(2910..>3861)
                     /locus_tag="VHX39_04970"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HEX3990509.1"
                     /translation="APVSFLFAWAGAVGFTLQMYFDFSGYSEMALGLARMVGIKLPMN
                     FNSPLKALSVVDYWSRWHITLTRFLTAGIYNPIAIRLARRRAAAGKPGNALSASIGVI
                     ALPTLVTMFLSGLWHGAGNQFLLFGMLHGAALVINHAWRLVRPRFWPDTAHYQRTTRP
                     IAWLMTFLLVVVALTWFHAASVAAGGNIVLGMVGLHGLLLPDAVATSVPSLAVTLGQF
                     GVGFTADGMGGLAMLYGWIALLLAIALLPPNTLETLRVWQPAVTMPAATASGRIDPWH
                     GLASRLQLSLTPVWALATAVVLTLGMLGVNRVSEFLYWQF"
BASE COUNT          930 a         1188 c         1130 g          613 t
ORIGIN      
        1 caacatgatc tcgcccagtg cgcgctggaa atgcaccggc tcccagaacc agcgcaaccg
       61 ggtggcccga tcgccctgcg gcggcactgt ctcggtcgtg tagggagcgt attcgacgaa
      121 gtcccaggcc gtgattttgt cgctgtgtgc atcggcgacg agttgtgcaa ggtccacctt
      181 gagtttctcg atgtatggcc aaagtcccgc ctgacgataa atctccatct gatcgacatg
      241 ggaagcgccg aggatcaagg tcagcgaaat gtcgtgctgc aaacagaagc cgatcatgcg
      301 ctgcaaaaca ccgatgtttg gcattgggcc gtgccagtca ccgagtacac gcttaaaccc
      361 ggcaatccga gacagatcgt attgatcctt ctgggtgaac agagcgttca tcccctcggc
      421 gcgggccacg tcgataaagt cggcggcatt tgcatttccg tcgggccgca ggtccaacac
      481 cgtgttgccg ccatgccgag ccagcaccgt atggacggcg tcgatcagtg cacccatggt
      541 cagcaccgag agaaacgcgt cgctaaagta ctgtgcacgg cggtccgggt tgggcgtacc
      601 gtcatccaac aacgtcagcc gcttttcgtc cggccctcgg ctcagtggcg gatccggcgt
      661 gaggaaggcc ggaacatcca ggatcgccac cgcatgacgc aacccaccgg tcgcccaggc
      721 ctgctgtaat tcgcgaaaca acacctcaga catattggat ccaggggtgc cgtaattgta
      781 gaccggacga tctgcgtccg gccacgccgg gctcgcggca tccatcgcga gataggcgcg
      841 cgatgtcccc aggatcaccg tgacaggccg cgcgcgttca acctgccagg ccttggccaa
      901 cgcgacatga ttgcgcgtcc ctggtttgta ttcattgatg ccggggaagc ggtgccacgc
      961 gaacacctcg tacggattga tggcggcatt gaagccggcg accactgcga gcatggcaac
     1021 caaagcagta gcccaaagcg ccaagaagcg tggcatcaga attgccaata cagaaattcg
     1081 ctcagctggc ccaaagacaa gatgcctgcc gccgaaactg ccgcaagacc aatcgcccat
     1141 gagcccgacg gtgtccattg ggcggctcgc accaaccacg gttcttgctt cgcaggccga
     1201 acaccgagcg ccggctcata acgcgccaga atttgcaacg tgttgggaag gcccagagcg
     1261 atcgccaata gcacgccgac gcgcagcaaa ccttccagca tctgcgatcc gctggagcta
     1321 tcgggctgca ccccaaccgt gtgcaaccaa tgagccaccg gaccaagacg ggcgagcaat
     1381 ccctcaggca gggtcacgcc atggacgccc accagatcgc tccagatcga gcccgccgcg
     1441 cggacggttg gcgcacggaa catcaccatc gcgaccgcga cagaaacaaa cgtcagtgcg
     1501 aaaccactgc ctgcgagcaa tcgaggatga tccttggcac ccggccagat gcgtggccgg
     1561 atcagccgcc aggcatgatt gatgctgatc atcgcgccgt gcatcaggcc ccagacgatg
     1621 taggtatagc cggcgccatg ccacagcccg gaaataaaca tggtcagcat tgtcggcaac
     1681 agcagcaatg tcgaatatga ggcgacggtg gtatcccgtc cgccgaatcc cggcttgccc
     1741 gccgccatgc gcttgcgagc caaatgcagg ctgagcggat tgtaaatata cgcggtcagg
     1801 aaccgcgtca gactgacatg ccagcgctgc cagaattcaa taatactcgc cgccttcagg
     1861 ggagaattga aattgaccgg cagtttgatc ccgaaaaacc gtgccaggcc cagagccatg
     1921 tcggtgtaac cggaaaaatc gaaataaatt tgaaacgtga acccaagtgc tgcgatccag
     1981 ccatcggccc aagctaaagc ctcgccattg gcagctcggg cgtacagcgg cgcgacgacc
     2041 agtgccattg gatcggcaag caccagcttc ttggccagtc ccatgaagaa cagcgtgaca
     2101 ccaaccgcag catcctcggc attgaagcgg gtcgagatgg cgcggaactg cggcatcatc
     2161 tcgcggtaat gcacgatcgg acccgcgatc agttgcggaa agaacaaaac gaacagcgcg
     2221 taatcacgaa atgtgaaagc tgtgacgcgg cccgcatgca catcggcgag aaacgcgatc
     2281 ttctggaacg taatgaacga gatgcccaac ggcaggatga tgcgcgtcag caccaggcca
     2341 gtgccaaaca catcgttgac cgcaccgcgc aggaacatga tgtatttgaa atatccgagg
     2401 aaacacagat tgaagccaat gccacagatc agcaccgcac gcgccagcgc aggtcgtgct
     2461 tcgcgatggc gctcgatcag gcgcgcgagg ccgagattga tcaggatcga tggtgcaatc
     2521 agcaggacat tgattggccg ccaccatgca tagaagccga gagacgcgag agtgagccag
     2581 agcaatgccc actcgcgccg gcgtgcgcca agcgcataga agccgatcag tactgccggc
     2641 agaaagccga aaataaattc gtaagagtta aacagcatga gcgacgctca cggcaagggc
     2701 gttcatgccc atgatggagt gagagacacg gcggcaatgc taaaggcaac gacgatcgtc
     2761 cggtcctccg ctattctgga atccccctga tcgcaggcgc catcttctga cacagcgccg
     2821 cgcgctctgt ccatcacgca ttgcttcccc gccgactttg ctaaccagag caatggtaac
     2881 aacgcggtag cccagtaccc gaggaacaat cagaactgcc agtagaggaa ttctgagacc
     2941 cggttcacgc ccaacatgcc aagcgtcagg accacggcgg ttgccaaagc ccagaccggg
     3001 gtcagtgaaa gctgcagtcg cgacgccagg ccgtgccacg gatcgatgcg ccctgacgcc
     3061 gtggcggccg gcatggtcac cgcaggctgc cagacccgca gcgtttccag cgtgttcggc
     3121 ggtagcaggg cgattgccag caacaaggcg atccaaccgt agagcatcgc caacccgccc
     3181 atgccgtccg cggtaaaacc gaccccgaat tgacccaggg tgacggcaag gctcggcacg
     3241 ctggtcgcca cggcgtctgg caggagcagg ccgtgcaggc cgaccattcc gagcacgata
     3301 ttgcctccag ccgcgacaga agcggcgtga aaccaggtca gcgccacaac aaccaacagg
     3361 aacgtcatca accaggcgat tggcctggtg gtacgctggt aatgcgccgt gtccggccag
     3421 aagcggggac gcaccaaccg ccaggcgtgg ttaatcacca gagcggcgcc atgcagcatg
     3481 ccgaacagca ggaactgatt gcccgcgcca tgccacaggc cggacaggaa catcgtcacc
     3541 agagtgggca gcgcaatgac cccgatagat gcgctcaatg cgttgccagg ttttcctgct
     3601 gcggcgcgcc gtcgggccaa acgtatggcg atcggattgt agatgccggc ggtcagaaac
     3661 cgggtcagcg tgatatgcca gcgcgaccag tagtcgacga cactcaatgc tttcagcggc
     3721 gaattgaaat tcatcggcaa tttaatgccg accatacggg caagacccaa tgccatttcc
     3781 gaatacccgg agaaatcgaa atacatctgc aaggtaaatc cgacggcgcc ggcccaggcg
     3841 aacaggaagg agacaggggc g
//
LOCUS       DATAVD010000275         4236 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_583247, whole genome shotgun sequence.
ACCESSION   DATAVD010000275 DATAVD010000000
VERSION     DATAVD010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4236
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_583247"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..559)
                     /locus_tag="VHX39_04975"
     CDS             complement(<1..559)
                     /locus_tag="VHX39_04975"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3990510.1"
                     /translation="MDFWLSYVTLASIYVLLGLSTNLLVGIAGIFSVSQAAVFGVGAY
                     IVAYLLMNEITSFLPAMLVASAFCVLLNVLVTLPTLRVSGDYFVVTSFGIQLLATAVF
                     TNWTAGTGGANGLPGIPPADLFGKTLDDISQLVTLCVVAMVLGCLAFWLIMRAPFGRL
                     LRAIREDELAVAAAGKNVLRAKVSAA"
     gene            complement(563..1429)
                     /locus_tag="VHX39_04980"
     CDS             complement(563..1429)
                     /locus_tag="VHX39_04980"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3990511.1"
                     /translation="MLALQLLFNGLATGCALGVVAVTFSLVYSTTKLFHVAHAGVFTL
                     GGYLAWSLTVHGAPFILAFAVAVVACAAMGAFIQAALYARLERRHATHLVILIASLGT
                     LAVMQNIIAAIYSPNILQFSLSWASEVIAGGGQIRLTVIQVLIVVASLASYSGLMWFA
                     HATILGKQMRAVASNPFLAEITRLQPRRVHVYVMAIASAVVCVPGALVPVDLGLQPYN
                     GVTPLLTATIAMIAGGVGSITGAFVLAIAIAELQNLSLLIIPGEWSIGITFFIFLIFM
                     LFRPTGLFSAVR"
     gene            complement(1433..2527)
                     /locus_tag="VHX39_04985"
     CDS             complement(1433..2527)
                     /locus_tag="VHX39_04985"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990512.1"
                     /translation="MRRIGLAAITASLLMIAAAWADTIRIGAILPLTGPGALIGTQQM
                     RGIQFAIDQANAKGGVHGAKIEVVFEDDQAKPDQSILSFNKLTDLEHLQVIFTAYSGP
                     SLAMAPLATRKKVLMINAGAQADKLAMASPYLINTLPTIGAEIAVIAKYVAGEGKKQA
                     AVLFENDAAGVSGRDDYVDTFPEAGGTIVAQEPTLFGQTDFRPALLKLADAKPDVMLV
                     SITAALDNMAQQYKQLGLKFTVAGTTFFQDPDVIKDPAAEGFVHTQIRIEAPPELADE
                     FKHKYGVEMEFFVRQYYNASQIVVTAMDQLLADGQPITGENMRTVIFKIRKFQGLIPL
                     EFKTNTATVPLDINVMHDGKDVTIKKMSTD"
     gene            2646..3062
                     /locus_tag="VHX39_04990"
     CDS             2646..3062
                     /locus_tag="VHX39_04990"
                     /inference="COORDINATES: protein motif:HMM:NF025178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske (2Fe-2S) protein"
                     /protein_id="HEX3990513.1"
                     /translation="MSKHVVATVSEIPPGQRKLVTVRGRSIAVFNLDGEFYGLFNRCP
                     HQGGPMCEGILTGLIQSREPGRYEYSRPGEILRCPWHGWEFDVKTGQSFCDPSKISVR
                     NYPMEVVPGQTVVQGPYVAETLPVTIEEQYVIVEMA"
     gene            complement(3043..>4236)
                     /locus_tag="VHX39_04995"
     CDS             complement(3043..>4236)
                     /locus_tag="VHX39_04995"
                     /inference="COORDINATES: protein motif:HMM:NF005720.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin-dependent oxidoreductase"
                     /protein_id="HEX3990514.1"
                     /translation="QIGVDCLVFESVDTIEPLGVGINTLPHAVRELFEIGLRAPLEAA
                     AVATARLAYYSSHGQQIWSEPRGAAAGYHWPQLSINRGELQMILLAAARERLGSDRIL
                     TGHQLTGWDETATGVRAHFVHRRTGAKRDDAEGALLIGADGIHSAVRSVLYPNEGPPI
                     WNGAIMWRGITLGLPFLDGRTMIMAGHEAQKFVAYPIARDGAVVNWIAERRFRPDHVW
                     RREDWNRPGNRNDFLPWFAGWQFDWLDVPSVINNAAQYFEYPMVDRDPLDRWTFGRVT
                     LLGDAAHPMYPIGSNGASQAILDARVLAREIQARGEVPDALVEYEAERRPATARIVLA
                     NRRNGPEQVMQLVEERAPKGFARIEDVLTREELEDAASGYKRIAGFDKDELNARPPIV
                     TPSRR"
BASE COUNT          911 a         1233 c         1313 g          779 t
ORIGIN      
        1 cggcggccga cactttggca cgcagcacgt tcttgccggc ggcggcgacg gccagctcgt
       61 cctcgcggat cgcgcgcaac aggcgcccaa acggtgcgcg catgatcaac cagaaggcga
      121 gacagcccaa taccatcgcc acgacacaaa gcgtaaccaa ttgcgaaatg tcgtcgagcg
      181 ttttgccgaa caggtcggcg ggcggaattc ccggcaaacc gttggcgccg ccggtaccgg
      241 cggtccagtt ggtgaagacc gcggttgcca gcaactggat gccaaacgac gtgaccacaa
      301 aataatcgcc ggatacccgt agtgtgggca aggtgaccag cacgttcaac agcacgcaga
      361 acgccgacgc taccagcatg gcaggaagga acgacgtgat ctcgttcatc aacaaatacg
      421 caacgatata agcgccgacc ccaaacacgg cggcctgcga gaccgagaat atgccggcaa
      481 tcccaaccag cagatttgtc gacaggccga gcagcacata gatcgacgcc agggtcacgt
      541 agctgagcca gaaatccatg gctcaacgca ccgcagagaa caggccggtg ggccggaaca
      601 acatgaagat caaaaatatg aagaacgtga tgccgatgct ccattcgccc gggatgatca
      661 gcagcgacag gttttgcagt tcggcgatgg cgatggccag gacgaaggct ccggtgatgc
      721 tgccgacgcc gccggcgatc atggcgatgg tcgcggtcag caaaggggtc acgccgttat
      781 aaggttgcag tccaagatcg accggcacca gagcgccggg gacgcaaacc acggccgagg
      841 caattgccat gacataaaca tggacccgcc gaggctgcag ccgggtgatt tccgcaagga
      901 atggattcga tgcgaccgcc cgcatctgtt tgccgaggat tgtggcgtgc gcgaaccaca
      961 ttaatccgct gtaggacgcg aggctcgcta cgacgatcag cacctgaatg acggtcaggc
     1021 ggatctgacc gcctccggcg atgacctcgc ttgcccagga aagggagaat tgcaggatgt
     1081 tgggggaata gatggcggcg atgatgttct gcatgaccgc caatgtgcca agcgaggcga
     1141 tcagaatgac caaatgggtc gcgtggcgtc gttccagtcg cgcatagagg gcggcctgga
     1201 tgaatgcgcc catggcagcg caggcgacga ctgccacggc aaatgccagg ataaatggtg
     1261 cgccatggac ggtcagcgac cacgccaggt aaccgcccaa ggtgaaaacg ccggcatggg
     1321 cgacatgaaa taatttcgtt gtggaataga ccagggaaaa tgttacggcg acaaccccca
     1381 gagcgcagcc ggtggcgagg ccgttgaaca gcagctggag ggcaagcatc gatcagtctg
     1441 tggacatttt cttgatcgtc acatccttgc cgtcgtgcat cacgttgatg tccaagggaa
     1501 cggtcgccgt gttggtcttg aactccagcg ggatcaggcc ctggaatttg cggattttga
     1561 agatgacggt gcgcatgttc tcgccggtga tcggctgacc gtcggccagc agctggtcca
     1621 tcgcggtcac gacaatctgc gaggcgttgt agtactggcg gacgaagaat tccatttcca
     1681 cgccgtactt atgcttgaat tcgtcggcga gttcaggggg ggcctcgatc cgaatctggg
     1741 tatggacgaa gccctcggca gcagggtctt tgatcacgtc gggatcctgg aagaacgtgg
     1801 tcccggcaac ggtaaatttc aggccgagct gcttatattg ttgcgccatg ttatccaggg
     1861 cggcagtgat cgagaccagc atcacgtcgg gtttcgcatc cgccagtttc aacaaagcag
     1921 gccggaagtc ggtttggcca aatagcgtgg gctcctgtgc cacgatggtt ccaccggctt
     1981 cgggaaacgt gtcgacatag tcatcgcggc cggaaactcc ggcggcgtcg ttctcgaaca
     2041 ggaccgcggc ctgttttttg ccctcgcccg cgacgtattt tgcgatgacc gcgatctcgg
     2101 caccgatcgt cggcagggtg ttgatcaaat agggtgacgc catcgccagt ttatcagcct
     2161 gcgcgccggc gttgatcatc agcactttct tccgggtcgc caacggagcc atcgccaacg
     2221 acggcccgga atacgcggtg aagatcactt gcaaatgctc cagatcggtc aacttgttga
     2281 aactgaggat cgactggtcg ggctttgcct ggtcatcctc gaacaccact tcgattttgg
     2341 cgccgtgcac accgcctttg gcgttggcct gatcgattgc aaactgaata ccgcgcatct
     2401 gttgcgtgcc aatcaaagcc cctgggccgg tcaacggcag aattgcgccg atccgaatgg
     2461 tgtcggccca ggctgccgcg atcataagca aagacgccgt aatggcggcc agaccaatcc
     2521 gtcgcatgga acgttgctcc gcttgaacgg cggcaggctt gggcgggcgg ccaaatgagg
     2581 tcaaggttgc ccgcatcgca cctgccagat aacttttgca caggttcaca cgggaagcgc
     2641 agcccatgag taagcacgtc gtcgcaacag tcagtgaaat tcctcccggt cagcgcaagt
     2701 tggtcacggt gcgaggccgc tccatcgccg tgttcaacct ggacggggaa ttttatgggt
     2761 tgttcaaccg ttgcccgcat cagggcgggc cgatgtgcga gggcattctg accggactga
     2821 tccagtcgag agaacctggc cgctacgaat actcaaggcc cggggaaatt ctgcgttgcc
     2881 cgtggcacgg ctgggaattc gacgtcaaaa ccgggcagag tttctgcgat ccctcgaaga
     2941 tcagcgtgcg gaattatccg atggaggtcg tgccgggcca gaccgtcgtg caaggtcctt
     3001 atgtcgcgga aacgttgcct gtcacgatcg aggaacaata cgtcatcgtc gagatggcgt
     3061 gacgatcggc ggcctggcgt tcaactcatc cttgtcgaaa ccggcgatgc gcttgtagcc
     3121 ggaagcggcg tcttcgagtt cctcgcgggt gaggacgtct tcgatccggg cgaagccctt
     3181 cggcgcgcgt tcctcgacca gttgcatcac ctgctcgggg ccattgcggc gattggccag
     3241 gacgatgcgg gcggtcgcgg gacggcgttc cgcttcgtat tccaccaacg catccggcac
     3301 ctcgccgcgc gcctggattt cccgcgccag aacacgcgcg tcgaggatcg cctgcgacgc
     3361 gccgttagag ccaatcggat acattgggtg cgccgcatcg cccagtaacg tcacgcggcc
     3421 aaaggtccag cggtcaagcg gatcgcggtc gaccattgga tattcgaagt actgggctgc
     3481 attattgatc accgacggca catcgagcca atcgaattgc cacccggcaa accacggcag
     3541 gaagtcgttt cgattgccgg gacgattcca gtcctcgcgc cgccacacat gatcggggcg
     3601 gaagcggcgt tcggcgatcc agttaaccac ggcgccgtca cgggcaattg gataggcaac
     3661 gaacttctgt gcttcatggc cggccatgat cattgtgcgg ccatcgagaa acggcagccc
     3721 caacgtaatg cctcgccaca tgatggcgcc attccagata ggtggccctt cgttcggata
     3781 cagaacagag cgaactgcgg aatgaatgcc gtcggcgccg atcagcaacg cgccctcggc
     3841 atcgtcacgt ttcgcgccgg tgcggcgatg gacgaagtgc gcgcgcacac cggtcgcggt
     3901 ctcatcccaa ccggtcagtt gatgcccggt gagaatgcgg tccgagccca gacgttcccg
     3961 cgcggccgcc agcagaatca tctgcagttc gccgcgattt atcgagagtt gcggccagtg
     4021 atagccagcg gccgcaccgc gcggttcgga ccagatttgc tgaccgtgac tggaataata
     4081 cgccagccga gcggtcgcca cggcggctgc ttcaagcgga gcgcgtaggc caatttcgaa
     4141 taattcacgc acagcgtggg gaagggtatt gatgccaacg cccagtggct caatcgtatc
     4201 gacgctttcg aagacaaggc agtcgacgcc gatctg
//
LOCUS       DATAVD010000276         1527 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2632958, whole genome shotgun sequence.
ACCESSION   DATAVD010000276 DATAVD010000000
VERSION     DATAVD010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2632958"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1442)
                     /locus_tag="VHX39_05000"
     CDS             complement(<1..1442)
                     /locus_tag="VHX39_05000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990515.1"
                     /translation="MVACYQDAGKRHDQASAGALANANRALLGLLPRTNAALQKARND
                     SDTVRKELGALPASAELGCGIDILLKENPGQPDLNAVRTLPREVADPIWKLAQVVMNL
                     SDADRTTLWQALQERLKTIETNLTDDATKQITAATGDASGLIALTDIRMRVAAFSDPD
                     AKAKLIQTIDTKAKTIRDTLHQAKPPVWVPPTCLDVYRWSAAPGAVNATVLGRRTLVT
                     AFLDDRVVPVFGLSVADWTDNDIATFKTLRTACHTASLPQSGTVPPETTELVQTANHG
                     RWIDGADQQIADARTGLVEYRKAQRDLTALRAQMDALPNTAASILNLAVMANSPVLAA
                     VSQDDRVAFTNAINQKRAAIGAAAADAAVKGLDSIKVASTADLAKLFAYANQTLPMIP
                     DQRGQHVFAAAFNQNLETVTKRFLPDYTAQLDAAPATADGLAQVNAADAAPGDGGRVA
                     AFKPFHDAAHARSDAIAKSERDHPCADLLTS"
BASE COUNT          272 a          470 c          467 g          318 t
ORIGIN      
        1 gacgtcagca gatcggcgca gggatggtcg cgctccgatt tggcgatcgc gtcggagcgt
       61 gcgtgcgccg catcgtgaaa tggtttgaag gccgcgacac ggccgccatc gccaggcgcc
      121 gcatcggccg cgttcacctg agcgagccca tcagccgtcg ccggcgcggc atccagttgc
      181 gccgtatagt ccggcagaaa ccgtttcgtg accgtctcta aattctggtt gaacgcggca
      241 gcaaacacat gctgtccacg ttgatcgggg atcatgggca gcgtctggtt ggcatacgcg
      301 aacagctttg cgaggtcggc cgtcgatgcg accttgatgc tgtcgaggcc tttcaccgcc
      361 gcgtcggccg ctgccgcgcc gattgcggca cgcttttgat tgatggcgtt ggtgaatgcc
      421 acccggtcgt cctgcgaaac cgccgccagc accggactgt ttgccatcac ggccaggttg
      481 aggatcgagg ccgcggtgtt cggcagtgca tccatctgtg cccgtaacgc cgtcagatcc
      541 cgctgtgcct tgcgatactc caccagaccc gtccgagcat cggcgatctg ctggtcggcc
      601 ccgtcaatcc agcgcccgtg attggcagtc tggaccaatt ccgtcgtctc cggtggtacg
      661 gtacccgatt gcggcaacga cgcggtatga catgccgtcc gcagggtttt gaacgttgcg
      721 atgtcgttgt cggtccagtc agcaacagaa agtccgaata ccggaacaac ccgatcgtcg
      781 aggaatgcgg tcaccaaagt gcgacgcccc agcactgtcg cattcacggc ccccggcgcg
      841 gcgctccagc gatagacatc aagacatgtc ggtggcaccc aaaccggagg cttcgcctga
      901 tgcagcgtgt cccggatcgt cttcgccttg gtatcgatgg tctgaatcag tttcgctttc
      961 gcatccgggt cgctgaatgc ggcgacgcgc attcggatat ccgtgagagc aatgaggccg
     1021 ctcgcatcac cggtggcggc ggtaatttgt ttcgtggcgt catcggtaag attcgtttca
     1081 atggtcttaa gccgctcctg caacgcctgc cacaacgtgg tgcgatccgc atcactcagg
     1141 ttcatcacga cctgagctaa tttccaaatc gggtctgcaa cttcgcgagg cagggtccgt
     1201 acggcgttca gatcgggctg gccgggattt tctttcaaaa ggatatcgat tccgcagcca
     1261 agttcggcgg aagcgggcag ggcgcccagt tccttcctga ccgtatcgct atcgttcctg
     1321 gccttctgca atgccgcatt ggtgcgcggc agcaaaccca gcagcgcacg attggcattg
     1381 gcgagtgcac cggcagaggc ctggtcgtgc cgtttgccgg cgtcctggta acaggcgacc
     1441 attgcctggc tggcggcctg gatatcgtcc tgacttcagg ccattacggg aaggccgaat
     1501 atcggcacca catcagcatc ctggaac
//
LOCUS       DATAVD010000277         5103 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_211421, whole genome shotgun sequence.
ACCESSION   DATAVD010000277 DATAVD010000000
VERSION     DATAVD010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5103
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211421"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..232
                     /locus_tag="VHX39_05005"
     CDS             <1..232
                     /locus_tag="VHX39_05005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990516.1"
                     /translation="ELPPISPAPPVAVADADELSATVVLTIAVALPPSPPAPAEPPEP
                     PAPPTPPAPPVTVNVLEVSLLLDPDASVSDND"
     gene            685..4254
                     /locus_tag="VHX39_05010"
     CDS             685..4254
                     /locus_tag="VHX39_05010"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX3990517.1"
                     /translation="MPPINEETFSFQQFTLDLRRGCLRDAAHEIELRPKSFAVLRHLV
                     ENAGRLVSKDELIELVWANVTVSDVSLARCVSDVRLALRDQAQRIIRTVPRRGYLFAV
                     PVARIANPTRPVLQDPDKTRSVHHAGEYRQLTVLACELAGLAELSARLDPEDLREATT
                     SCYRRCAGIVERHHGYVAHDAGGDLLAWFGYPEALEQDAENAVRAALALQDSATQLSR
                     DFGTRLQPSIGIATGIVMIDEEPATSERKATGEPLTLSARLQAQAEPGQIVIAQSTRR
                     IAGGLFEYQDLGPVLLKGLAAPVEIARVVGESEAENRFAAYHPAGLTPLVGREEEIAL
                     LLRRWRQAKGGEGSTVLLEGEPGIGKSRITQTLLDLLRGEDHERPRLFCSPHHRDSPL
                     YPAIGYLARVAGLRRTDGGEQRLARLETALAATAADFPDAAPLLADLLAVPVGDRYAP
                     VTLTPQARKTQILRVLLGQIEALAAVRPVLLVIEDVHWADPTTLELIDLIVERTPCLP
                     LLLIITFRPEFISPWDGRIQTTSITIGRLPPRRCAEIVSGVLHGKQLPQAITTEILDR
                     TDGIPLFVEELTKAVVESGALIETGDGYTVTGSLPPRAIPMTLRASLLARLDRLGLAP
                     RDVAQIGAALGRRFSHDLIAAVAALPAGELDDALARLTGAGLMSRRGMPPDAEYTFKH
                     ALVQDAAYGTLLREPRRALHARIAATLAARFGDIAENQPDLLAHHCTEAGLIEQAAGL
                     WGKAGQLSLARSALREAAAQLTKAVGQIETLPGTPARRREQITLQIALANALMHTKGY
                     AAPETKVALDQARRLVEPAEAFGEPPDDPLLLYSVLHGFWVANHVAFNGDVVRELADR
                     FMAMAQKQGARFPLVLGHRLVGTSLLFLGDVVGGREHLDRALELYDPPAHRPLATRFG
                     HDVGVAILSNRPYALWLLGYPQAARDDCAEALRQAREIGQAASYLYALTRIASFNLVS
                     GDFGAATAQSRELVAIAEEKDGSYWKAAGMMTQGCLFALTGEPGMAVQLITAGMTASQ
                     STGANLRLPWSLSCLARAHAGLGQHDEAWRRIDQAMEVMEATKETWQEPELHRVAGDL
                     TLLLPEPNASQAQAHYERALAVAREQKAKSWELRVALSLGRLWRDQGEPQRAHDLIAP
                     ICSWFSEKVDPPDLIEAKTLLTELGDCGEVVCRAANTLTFSGR"
     gene            complement(4892..5103)
                     /locus_tag="VHX39_05015"
                     /pseudo
     CDS             complement(4892..5103)
                     /locus_tag="VHX39_05015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611189.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS630 family transposase"
BASE COUNT          926 a         1580 c         1627 g          970 t
ORIGIN      
        1 tgagttgccg ccaatctcgc ccgcaccacc ggttgcggtg gcggatgcag acgaactgtc
       61 tgcgaccgtc gtgctgacaa tagcggtcgc gttaccaccg tcgccgcccg cgccagcgga
      121 gcctccggaa ccgcccgcgc caccgacgcc gcccgcgccg ccggttactg tcaatgtgtt
      181 ggaggtgtcg ctattgctcg atccggacgc cagcgtctcg gacaacgatt gacccggccc
      241 gcccgcggtt ccgaaaccgc ccgaacttgt gccagctgtg ccctgattgc cagtaaatgt
      301 ctcattcatt gacgcctccc ctttcgagta tttgtcgggc gcctgttcgc gtcagggttg
      361 aaacaaccga caaatcacaa attcaaattg cagaatcaga ccaaacctcc gtcgtcgtta
      421 cgcgcaacaa ttgcgagcgg tgaatgcggt ctggtcgtgt gttcgttact tattcagcac
      481 gctttggatg ctgcccaatg tcatgcaatg ctcaggtttt ctcgcggcca ccaggcgcag
      541 gatccaatcc gtcatgcagt tgcctgcatc gtgtggatca aagcgcgacc caagtggtat
      601 gtcttgaaat gagagtgcaa aaactttgaa aagatgttga aatccggtac cggcggcgga
      661 tagccggtca aaaacggacg caagatgcca ccgatcaacg aggaaacctt ttcgttccag
      721 caatttacgc tcgatctgcg gcgcggctgc ctgcgcgacg cggcgcacga gatcgaattg
      781 cggccaaaga gttttgcggt cctgcggcat ctggttgaga acgccggccg cctggtgtcg
      841 aaggacgaat tgatcgaact ggtgtgggcc aacgtcaccg tctctgacgt gtcgctggct
      901 cgctgtgtga gcgacgtgcg tctcgccctc cgggatcagg cgcaacgcat catccggacc
      961 gttccgcggc gcggctatct gttcgccgtc ccggtcgcac gcatcgccaa cccgacccgg
     1021 cctgtcctgc aggaccctga caaaacgcga tcggtgcacc atgccggtga gtaccgccag
     1081 ttgacggtcc tggcttgcga actggccgga ctggcagaac tttcagcccg cctcgatccc
     1141 gaggatctgc gcgaggcaac gacatcctgt taccggcgct gcgccggcat cgtcgaacgc
     1201 caccacggtt atgttgccca tgatgccgga ggcgatctgc tcgcctggtt cggctatccc
     1261 gaggcattgg aacaagacgc tgaaaacgcg gtgcgtgctg cgttggcgct gcaggactcg
     1321 gcaacccagc tcagtcgcga tttcggcacg cggttgcagc cgtccatcgg aattgccacc
     1381 ggcatcgtaa tgatcgatga ggaacccgcc acaagtgagc gcaaggccac cggcgagccg
     1441 ctgaccttgt ccgctcgctt gcaggcacag gcggagcccg gtcagatcgt catcgcccaa
     1501 agcacgcggc gcattgccgg cggtcttttc gaatatcagg acctcggccc agtactgctc
     1561 aaaggcctgg ctgcgccggt ggagatcgca cgggtcgtcg gcgaaagcga ggccgagaac
     1621 cgtttcgcgg cgtaccatcc agccggcctg acaccattgg tgggccgtga ggaagaaatc
     1681 gctctcctgc tccgtcgctg gaggcaggcc aagggcggcg agggttcgac cgtgttgctc
     1741 gaaggcgagc ccggcatcgg caagtcgcgc atcacgcaga ccctgctgga cctgttgcgc
     1801 ggcgaggacc acgaacgccc acgcctgttt tgctcaccgc atcaccggga cagtccgctt
     1861 tacccggcaa tcggttatct cgcccgggtc gctgggctgc ggcgcaccga tggcggcgag
     1921 cagcggctgg ccaggcttga gacggccctg gcggcgaccg ccgcagattt ccccgacgct
     1981 gcgcctctgc tggcagacct gttggcagtg ccggtgggcg atcgctacgc accggtgacc
     2041 ctgacgccgc aggcccggaa gacacagatt ctacgagtgt tacttggcca aatcgaagcg
     2101 ctggccgccg tgcggccggt gttgctggtg atcgaggacg tccattgggc tgatcccacc
     2161 acactcgaac tcattgatct catcgtcgag cgaacgccgt gcctgccgtt gctgctcatc
     2221 atcaccttcc gccccgaatt catctcaccc tgggacggcc gcatccagac gacctcgatc
     2281 accatcggcc gattgccgcc gcggcggtgc gcggagatcg tatccggcgt tttgcatggc
     2341 aagcagttgc cgcaagcaat tactaccgag atcctcgacc gcacggatgg catcccgttg
     2401 ttcgtcgaag aactgaccaa ggccgtggtc gagagcggcg cgttgatcga gaccggcgac
     2461 ggctacacgg tgaccgggtc gcttccgccg cgagccattc cgatgacgct ccgggcatcg
     2521 ttgctggccc gcctcgatcg actgggtctc gcgccccgcg acgttgcgca aattggcgcc
     2581 gctttgggcc gtcgtttctc gcatgatctg atcgccgccg tcgcggcgct gcccgccggc
     2641 gagcttgacg acgcactggc ccggttgacc ggcgcgggat tgatgtcccg gcgcggcatg
     2701 ccgccggacg cagaatatac gttcaagcat gctctggtgc aggacgctgc ctatggcacc
     2761 ctgctgcgcg aaccgcggcg cgctctacac gcccgtatcg cggcaacgct ggcagcccgg
     2821 tttggggaca ttgcggagaa ccagccggac ctgctggcgc atcattgtac tgaggcgggc
     2881 ctcatcgagc aggccgccgg tctttggggc aaggccgggc aattatcgct ggcccggtcg
     2941 gcgctgcgcg aggcagcggc gcaattgacc aaggcagtcg gtcagatcga gaccttgcca
     3001 ggcactccgg cccggcgccg tgagcaaatc accctgcaga tcgcgctagc gaatgcgctg
     3061 atgcacacga aaggctatgc ggcacccgaa accaaggtcg cactggacca ggcgcgccgg
     3121 ttggtcgaac cggcggaagc gttcggtgag cctccggacg atccgttact tctttactcg
     3181 gtgctgcacg gcttctgggt ggcgaaccat gtggcgttca acggcgatgt ggtccgcgaa
     3241 ctggccgatc ggttcatggc gatggctcag aagcaggggg cgaggtttcc gcttgtgctc
     3301 ggacatcggc tggtcggcac gtccctatta tttctgggcg atgtcgtcgg aggccgagag
     3361 catctcgatc gggcgctcga attgtatgat cccccggcgc accgaccgct ggcgacgcgg
     3421 tttggtcatg acgtcggggt ggcgattttg tccaaccggc catatgcctt gtggctgctt
     3481 gggtatcctc aggcagcgcg cgacgactgc gctgaggcgc tgcgtcaggc gcgcgagatc
     3541 ggtcaggccg ccagctacct ttacgctctg acccggatcg cttcattcaa tctggtcagc
     3601 ggcgattttg gggccgcgac ggcgcaatcc cgggagcttg tcgcgatcgc tgaggagaag
     3661 gatggctcct actggaaggc ggccggcatg atgacgcagg gctgcctttt tgcgctgacc
     3721 ggcgagcccg gcatggcggt ccaactgatc acggcgggga tgaccgcgtc gcagtcgact
     3781 ggtgcgaatt tgcggctgcc gtggagtctg tcctgtctgg ctcgcgccca tgccggtctt
     3841 ggccaacacg acgaggcgtg gcgccggatc gaccaggcca tggaggtgat ggaggcgacc
     3901 aaggagacct ggcaggagcc ggaactgcat cgggttgcag gcgacctgac cctgctgttg
     3961 ccggagccga acgcatcaca ggcgcaggcg cactacgagc gggctctggc ggtcgcgcgg
     4021 gaacaaaaag ccaaatcctg ggaattgcgg gtcgcgttga gcctggggcg gctatggcgc
     4081 gaccaaggcg agccgcaacg cgcgcacgac ctgatcgcgc cgatttgttc ctggttctcc
     4141 gagaaagtcg acccgcctga cctgatcgag gctaaaacgc ttctgaccga gctcggggat
     4201 tgcggcgagg tggtgtgccg ggctgccaac acgttgacgt tctccggcag gtagcgaggg
     4261 cctccgaaga ccaacctgaa ctgctttggc ggcagtgggc caggcaaaaa aagcgggcgc
     4321 gacgatcgcc ttgcagcgga tcgcgcgccc aggagggggg ttgggctgcg cgggggacag
     4381 attccacgcg cattgggtca acgcgggaat gccatcgtgg ttcccgcagt gagcaaaaaa
     4441 atttgagttt aattttgccg ccggttgagc agcagtggat atgccgatac cgtaataaac
     4501 ctggctcgtt tcagcgatcg cttgcgggca gatttggcct gagccggggg cgtatatctg
     4561 ctgcggaaac cgacgtcttt cgtcctgtat atgtgacaag cttcttaatg accggtatcc
     4621 acaaaacgat tttcatacca tcgaagggcc cctcttcctt gggcgtcacc agcggatgaa
     4681 taagcgcacc ctctgtacct ctgcgactct ttgcctctga aaaaaatcgc gcgcgtgggc
     4741 ggaccggggc gtaagaatgg agccaccaat ggcagcggca atgccgcggc gagcgccgtt
     4801 ttatatccga tcaggttgaa gcgtaacctt ggtgggccag gaagtttcgg cattcctgct
     4861 cggagaacgc ggtcatcagt tcaccgatac gatcacatcg tagcgccgcg ttgaaggtcg
     4921 tgatgttcca gtgaccgtgc ggaactttgc cgatcaggcg ttgcccctcc ggagcacggc
     4981 cgcgcaaccg ggtcatattc gtactcacac cggtttcatc aatgaaaacc agatattgag
     5041 gcgtgagcaa tatctggttc tcgcgccaaa acgtcgcgcg ccgccttgac gccggacaat
     5101 cca
//
LOCUS       DATAVD010000278         1957 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_772120, whole genome shotgun sequence.
ACCESSION   DATAVD010000278 DATAVD010000000
VERSION     DATAVD010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1957
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_772120"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1000
                     /gene="nrfD"
                     /locus_tag="VHX39_05020"
     CDS             <1..1000
                     /gene="nrfD"
                     /locus_tag="VHX39_05020"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEX3990518.1"
                     /translation="AGMFPVLHTGRPWLAYWLFPYPNTMDLWPQFRSPLLWDVFAVST
                     YFTISAVFWYVGLLPDLATLRDSAKQRWKQVAYGAAAMGWRSSARHWQRYEKASLLLA
                     GLATPLVVSVHTVVSFDFAVSIVPGWHTTIFPPYFVAGAIYSGFAMVLTLMIPVRTFY
                     GLEDIITMRHLNNMAKVTLATGLIVGYGYMMEAFFGYFSADVYERFATWNRLFGPYAP
                     FYYCLIFCNIITPQFLWFKRIRTNPLVLWVISIVVNIGMWLERFVIVVVSLHRDFLPS
                     SWSMYWPTVWDWAVFTGTLGFFMFCIFLFIRLLPLITIFELRMLLPGARVKEPVKI"
     gene            997..1554
                     /locus_tag="VHX39_05025"
     CDS             997..1554
                     /locus_tag="VHX39_05025"
                     /inference="COORDINATES: protein motif:HMM:NF023249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3341 domain-containing protein"
                     /protein_id="HEX3990519.1"
                     /translation="MSAGRDQETSPLYGLMAEFETAGELVSAARRTRDEGFRKFDAYS
                     PVPLHELDEAMDLHDNRVSLCTLIGGLVGCVGGFSLCSWVEAVALPLNIGGRPMISVP
                     MFIPITFELTILVGGLTAAISMLVMNGLPRPYHPVFNVERFVATASRSKFFLCIESED
                     PKFDREATAGFLESLDPEEIAEVAR"
     gene            1551..>1957
                     /locus_tag="VHX39_05030"
     CDS             1551..>1957
                     /locus_tag="VHX39_05030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990520.1"
                     /translation="MKTIAKSLGVALIGLSLAGCSRLDMQDQPKYRPQRPSDFFADGR
                     SERQPVEGTIARGALDEDAAFYEGKDAAGNDIEAFPIAVDKDVILRGQDRYDIYCSPC
                     HGRIGNGLGMIVRRGFKQPPSYHIDRLRDAPVG"
BASE COUNT          324 a          586 c          617 g          430 t
ORIGIN      
        1 cgcgggcatg ttcccggtgc tgcataccgg tcgcccgtgg ctcgcctact ggctgttccc
       61 ctatccgaac acgatggacc tctggccgca gttccgcagt ccgctgctct gggatgtgtt
      121 cgcggtttcc acgtatttca cgatttccgc ggtgttctgg tatgtcggcc tgctgcccga
      181 tctggccacg ctccgcgatt cggcaaaaca gcgctggaag caggtcgcgt acggagcggc
      241 ggccatgggc tggcgaagct cggcgcggca ttggcagcgg tatgaaaagg cctcgctgct
      301 gcttgccgga ctggccacgc cgctggtggt ttcggtccac acggtggtca gcttcgactt
      361 cgcggtttcc atcgtgccgg gctggcacac cacgattttc ccgccgtact tcgtcgcagg
      421 cgccatttat tccggtttcg cgatggtgct cacgctgatg atcccggtgc ggacattcta
      481 cgggctcgaa gacattatca cgatgcgcca tctgaacaat atggcgaagg tgacgctcgc
      541 gaccgggctg atcgttggct acggctacat gatggaggct ttcttcggct atttcagcgc
      601 cgacgtctac gaaagattcg ccacctggaa ccggctgttc ggcccctacg ctcccttcta
      661 ctattgtttg attttctgca acatcatcac gccgcagttc ctgtggttca agaggattcg
      721 caccaaccct ctggtgctgt gggttatttc aatcgtcgtg aatatcggga tgtggcttga
      781 gcggtttgtg atcgtggtgg ttagtctgca ccgcgacttt ctgccttcga gctggtcgat
      841 gtactggccg acggtgtggg actgggcggt cttcacgggc acgctgggct tcttcatgtt
      901 ctgcatcttc ctgttcatcc ggctgctccc cctgatcacg atcttcgagc tgcgcatgct
      961 cctgcccggg gcgcgcgtca aggagcccgt caaaatatga gcgctggtcg cgaccaggag
     1021 acgagtccgc tttacggcct gatggcggaa ttcgagacgg cgggcgaact ggtgagcgcg
     1081 gctcgccgga cccgcgacga gggtttccgg aagttcgacg cttattctcc cgtcccgctg
     1141 catgagctgg acgaggcgat ggatctgcac gacaaccggg tgtcgctctg tacgctcatc
     1201 ggaggtcttg tagggtgcgt cggcgggttc agcctgtgca gctgggtcga ggccgtggct
     1261 ctgcccctca atatcggcgg gcgccccatg atcagcgtgc cgatgtttat tccgatcacg
     1321 ttcgagctta cgattctggt gggcggcctg acggccgcga tcagcatgct tgtgatgaac
     1381 ggcctgccgc ggccttacca ccctgtgttc aacgtggagc gattcgtcgc cacggcatcg
     1441 cgcagcaagt ttttcctgtg catcgaatcc gaagatccga agtttgaccg ggaagccacg
     1501 gcgggctttc tcgagagtct cgacccggaa gagatagcgg aagtcgcccg atgaagacga
     1561 tcgcaaaatc tctcggagtg gccctgatcg ggttgagcct ggccggctgt tcgcggctcg
     1621 acatgcagga tcagccgaaa taccggccgc agcgccccag cgatttcttc gccgatgggc
     1681 gcagcgagcg gcaacccgta gagggaacca tcgcgcgggg cgcactcgac gaggatgcag
     1741 ccttttacga gggcaaggat gccgcgggga acgacatcga agcattcccg atcgccgtcg
     1801 acaaggacgt gatcctgcgc ggacaggaca gatacgacat ctattgctcg ccctgccacg
     1861 gccgcatcgg aaacgggctt ggaatgatcg tgcggcgcgg cttcaagcag ccgccttcgt
     1921 atcacatcga ccgcttgcgc gacgcgccgg tggggca
//
LOCUS       DATAVD010000279         2195 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3378015, whole genome shotgun sequence.
ACCESSION   DATAVD010000279 DATAVD010000000
VERSION     DATAVD010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3378015"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1156)
                     /locus_tag="VHX39_05035"
     CDS             complement(<1..1156)
                     /locus_tag="VHX39_05035"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX3990521.1"
                     /translation="MTEISRNAQELALVALARRVLPGGSFGNLSSDIVIAEGRAGRVW
                     DVSGNEYVDFLLGSGPMFIGHAHPDVVAAVQAQIPRGVTFFANSEPGIRLAAAIVDAV
                     PCADKVRFTSTGTEADVYAMRVARAFRGRDKVMKFEGGFHGMSEYSLQSLAPKRPGNF
                     PQAVADGPGIPRSVSGDMLIAPFNNADLAASLIREHRDELAAVIVEPFQRLLKPRPGF
                     LEALREVTAECGIPLIFDEIVTGFRFAYGGAQEYYGVIPDICTLGKIVAGGFPLAAVC
                     GRAEIMRHFDRSEVGDNVLPQIGTLSGNPVASVAGLTTLEVLRQAGTYERVFATGRRL
                     MDGLAGMIRERGLLAQVIGEPVLFDIIFADGEIFDYRSGLQQDSDALRRFN"
     gene            1264..>2195
                     /locus_tag="VHX39_05040"
     CDS             1264..>2195
                     /locus_tag="VHX39_05040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990522.1"
                     /translation="MTVAPDIDPTLVLTDGAIRTIFAPATLEAGRIYELRGRVRNLRI
                     TSHGALIFAETHGTAPDPYLQRITVGHGRNGGIGISGMCSCPVGRDCKHVAAVLVAAH
                     REELAAGGSDVPPMTSSRPDTSHDPLLPYDLAGWLSTLHADDSQETEDFPPSVHQRLH
                     YVISGTEASRGAPCMLIRPFTVRLLLNGKVSHPKQYALHQVGTPARYLRPSDRLILAR
                     LRRYAADQMNRATDEDPVDTLRRVIATGRAFWGSVDGPRVTEGKPRNGNVVWKLAQDG
                     TQQTVLALEEGLQPLDATMLWYVEPRTGTVGPITL"
BASE COUNT          451 a          726 c          634 g          384 t
ORIGIN      
        1 cgttgaagcg ccgcaacgcg tcggaatctt gctgcaagcc ggaccggtag tcgaagatct
       61 caccgtccgc gaagatgata tcaaacagca ccggctcgcc gatgacctgc gccagcaacc
      121 cgcgctcacg gatcatccca gccaacccat ccatcagacg ccgcccggtg gcgaaaacgc
      181 gctcataggt gcccgcctgg cgtagcacct ccaatgtcgt aagaccggcg acggaagcta
      241 ccggattgcc cgacagcgtc ccgatctgcg gcagcacgtt gtcgccgacc tcgctacgat
      301 cgaaatggcg catgatctcg gcgcgtccac agacagccgc caaaggaaag ccgcccgcga
      361 cgattttccc caacgtgcaa atatcgggaa taacgccgta gtactcctgc gcaccaccat
      421 aggcgaagcg gaacccggtc acgatctcat cgaaaatcag cgggatgccg cattccgcag
      481 tcacttcgcg caatgcttcc aggaaccccg gacgcggctt caacaaacgc tggaacggct
      541 ccacgatcac tgcggccaac tcgtcgcgat gctcgcggat taaactcgct gcgaggtcgg
      601 cattgttgaa tggcgcgatc agcatatccc ccgacactga cctaggaatc cccggcccgt
      661 ctgccaccgc ctggggaaaa tttcccggcc gcttcggtgc caggctttgc aggctatatt
      721 cgctcatgcc atgaaagccg ccttcgaatt tcatgacctt gtcacggcca cgaaacgccc
      781 gcgcgacacg catcgcataa acatctgcct cggttccggt gcttgtgaac ctcaccttgt
      841 cggcgcacgg tacggcatcg acaatcgcag ctgcgaggcg aatcccgggc tcgctattgg
      901 caaagaatgt cacgccgcgc gggatctgcg cctgcacggc agccacgaca tcaggatgcg
      961 catggccaat gaacatcggg ccggatccca acagaaaatc gacatattcg ttgccggaga
     1021 cgtcccagac acggcccgcg cgaccttcgg caatcacgat atccgaggaa agattgccga
     1081 aacttccgcc cggcaacacg cgccgtgcca acgcaaccag cgccagttcc tgcgcattgc
     1141 gtgaaatttc cgtcattgtc ggtctcctcg aaaactatcc acagggaaaa gaacattttc
     1201 gagggctgcc atgcaagctg gcggcgactc gacacagcag tccatgctaa tccgatgcat
     1261 gttgtgacag ttgccccaga catcgatccc acgctcgttc tgaccgatgg tgcgatccgc
     1321 accatctttg ctccggcgac cctggaagcc ggacgaatct atgagctgcg tggccgcgtg
     1381 cgaaatctgc gcatcaccag ccatggtgcg ctgattttcg ccgaaaccca cggtaccgcc
     1441 ccggacccct acctgcagcg cattaccgtt ggtcacggtc gaaacggcgg gatcgggatc
     1501 agcggtatgt gctcctgccc ggttgggcgc gactgcaagc acgtcgccgc agtgctggtt
     1561 gccgcgcacc gcgaggaact cgccgccggc ggtagcgatg tgccaccgat gacgtcctcc
     1621 aggccggaca cgtcgcacga tccgctgctg ccttatgatc tggcgggttg gctctcgacg
     1681 ctgcacgccg atgactcgca ggaaaccgag gatttcccgc cgtcagtgca tcagcggctg
     1741 cattatgtga tttcgggcac ggaggcttcg cgtggcgccc cttgtatgct tatccggccg
     1801 ttcacggtgc ggctgctgct gaacggcaag gtcagccacc cgaagcaata tgcgctgcac
     1861 caggttggca ctccggcgag gtatctgcgg ccgtccgatc ggctcatcct ggcccgacta
     1921 aggcgctacg ccgccgacca gatgaaccgc gctaccgacg aagaccctgt cgacacccta
     1981 cgccgcgtca ttgccactgg gcgggcgttc tggggctcgg tcgatgggcc gcgggtgacg
     2041 gaaggcaaac cgcgcaatgg aaacgtggta tggaagctgg cccaggatgg aacgcagcaa
     2101 acagtgctgg cgctggagga agggctgcag ccgctcgacg cgacaatgct ttggtacgtc
     2161 gagccgcgga ccggtaccgt tggtccgatc acgct
//
LOCUS       DATAVD010000280         2277 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2633796, whole genome shotgun sequence.
ACCESSION   DATAVD010000280 DATAVD010000000
VERSION     DATAVD010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2633796"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..366
                     /locus_tag="VHX39_05045"
     CDS             <1..366
                     /locus_tag="VHX39_05045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEX3990523.1"
                     /translation="VPFRAGHHFASDLVSFGRANQLRPGEIPYAEAQRLYAQTAAVFG
                     LPTALPLTEAGFRRALSAEGMVRASQGLGGPQPAEVARMLIGHRNRLATDRDWLAAAR
                     DRLTQGAVKRDMAFAALQS"
     gene            complement(388..1065)
                     /locus_tag="VHX39_05050"
     CDS             complement(388..1065)
                     /locus_tag="VHX39_05050"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HEX3990524.1"
                     /translation="MTSIDADPYPWPFDASLAPDTTAMIVIDMQTDFCGVGGYVDKMG
                     YDLGLTRAPIGPISDVLAALRPRGYTIIHTREGHRPDMSDLPENKRWRSRRIGAGIGD
                     PGPCGRILTRGEPGWQIIPELFPLPGEIVIDKPGKGSFCATDLELILRTRGIRNILLS
                     GITTDVCVHTTMREANDRGFECLLLEDCCGATDAGNHAAAVKMVKMQGGVFGAVSDSA
                     TLIEALQ"
     gene            1681..>2277
                     /locus_tag="VHX39_05055"
     CDS             1681..>2277
                     /locus_tag="VHX39_05055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990525.1"
                     /translation="MKRLLIMIAAALGLVASQGRAQNFSDTSIGVRDGLTESNPGGNF
                     AQIVGKGTRDVNKVIVNLGHFDVWDYGTNFFNVDVLFSNPNEAAVNSSGGSTEFYAVY
                     RAQLSPDKIFGINTAIGPFKAINFEIGGDAEAENNAFSPAKKLLVAGPNFNIGLPAGF
                     LNIGVHVSKEWNHNAFCADACTKPGGPVSFDVTPEFEFV"
BASE COUNT          452 a          676 c          704 g          445 t
ORIGIN      
        1 gtgccgtttc gtgccggcca ccatttcgca tccgacctgg tgagcttcgg ccgtgccaac
       61 caacttcgcc cgggcgaaat accctatgcc gaagcccaga gactgtacgc ccagaccgct
      121 gccgtattcg gcctgcccac cgccctgccg ctgaccgagg caggcttccg ccgtgcattg
      181 tcggcggagg ggatggtgcg cgccagccag gggttgggcg gcccgcagcc agccgaggtt
      241 gcgcggatgt tgatcggaca ccgtaatcga cttgccaccg accgggattg gctggcggcg
      301 gctcgcgacc gcctgacgca gggtgcggtg aagcgcgaca tggcgttcgc cgcgttgcag
      361 tcataggctc cttcggtcag gcgcgtttca ctgcagcgcc tcgatcagtg tcgcgctgtc
      421 gctgaccgcg ccgaacacgc cgccttgcat tttgaccatt ttcactgcgg cggcgtgatt
      481 gccggcgtcg gtggcgccac agcaatcctc cagcagcagg cactcgaagc cgcgatcgtt
      541 ggcctcgcgc atcgtggtgt ggacgcagac atcggtagtg atgccgctca acagaatgtt
      601 gcggatgccg cgggtccgga gaatcaactc cagatcggtg gcgcaaaaac tgcctttgcc
      661 gggtttgtcg atgacgatct ccccgggcaa cggaaacagt tccggaatga tctgccagcc
      721 cggctcgccg cgggtcagaa tgcggccaca cggacccgga tcgccgatgc ccgcgccgat
      781 ccggcgggac ctccagcgtt tgttttccgg caaatccgac atgtcggggc gatggccttc
      841 gcgggtatgg atgattgtgt agccgcgtgg ccgtaacgcc gccagcacgt ccgagatcgg
      901 cccgatcggc gcgcgggtca gccccaggtc atagcccatt ttgtcgacat aaccgccaac
      961 cccgcagaaa tcggtctgca tgtctatgac gatcatggcg gtcgtgtccg gtgccagcga
     1021 ggcatcgaat ggccacggat acggatcggc atcgatactg gtcatgctcg tctcccggtc
     1081 gaacggtgcc gcggccttcg caggacggtg tcggtcgccg gcaggcacag gccacaggct
     1141 atcggccgtg gactgcggaa catcgaggca agccatgtgc caggcaacca tcgctcgatg
     1201 ggctcgcagc ccaactggca attgaacagg cacaatggag agaaacttaa ccatatgttc
     1261 ataatatgat ctatattatg tgacattcgg tgcataagac gaaatattgt gcaattcagg
     1321 taacgcgtaa tggtccgggt ccccatggcg ccacagcgtg ccgaccgggc attggacttg
     1381 ctcccacgag cggcgcgcgc ctgccacgga aacctgactg agatctgatg ccgcctttcg
     1441 tcggcccgga acagaaatgt ggcatttccg ccacggtgtc gcgtcagcac atattctgcc
     1501 cgccggtggc atatcgattg cttggatccc gaccagagat cgtcggtgga cggcatagga
     1561 ggggacgttc ctgaaccagg actaaccgcg ggggcggcat cttaaccggg cggacggcaa
     1621 cgaccgacgc cgatccggag gaggccggtg ggttcatgag aacaaaggac agacaagacc
     1681 atgaaacgat tgttgataat gatcgcggcg gcgctcggcc tcgttgcgag ccaggggcgc
     1741 gcgcaaaact ttagtgatac ctcgatcggt gtgcgtgatg gcctgaccga atcgaatccc
     1801 ggcggaaatt tcgcgcagat cgttggcaaa gggacgcggg acgtcaacaa ggtcatcgtg
     1861 aatctcggac atttcgacgt ttgggattac ggcacgaatt tcttcaatgt cgatgtgctg
     1921 ttctccaatc ccaatgaggc agcggtgaat tcatccggcg gttcaaccga attttatgct
     1981 gtctatcgcg ctcagttgag cccggacaaa atctttggca tcaacaccgc aatcgggccg
     2041 ttcaaagcga tcaatttcga gatcggcggc gacgccgagg cagagaacaa tgccttctcc
     2101 ccggccaaga agctcctggt cgctgggccg aacttcaaca ttggcctgcc tgccggattt
     2161 ctgaatatcg gtgtgcatgt atcgaaagag tggaatcata atgccttctg tgcggacgcc
     2221 tgcaccaaac ccggtgggcc ggtcagtttc gacgtgacac cggaatttga attcgtt
//
LOCUS       DATAVD010000281         2320 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1143789, whole genome shotgun sequence.
ACCESSION   DATAVD010000281 DATAVD010000000
VERSION     DATAVD010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2320
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1143789"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..736
                     /locus_tag="VHX39_05060"
     CDS             <1..736
                     /locus_tag="VHX39_05060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089521.1"
                     /note="LivHMGF is the membrane component of the LIV-I/LS
                     branched-chain amino acid transporter; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease LivH"
                     /protein_id="HEX3990526.1"
                     /translation="GITAVPIALALTLVFAAALAALYGWTVERVAYRPLRGSFRLAPL
                     ISAIGMSITLQNFVQVSQGARVKPIPALIPGGFQIMETDGFTVRLEGMQILIVVTTLL
                     VLTLFTWLVTRTPLGRRMRACEQDLRMASLLGIDTDLTISITFIIGAALAAVAGLLFL
                     LYYGVIDFYIGFIAGVKAFTAAVLGGIGSLPGAVLGGLLIGLIEVFWSAYFSVAYKDV
                     AAFSILIVALIFLPNGILGRAEVEKV"
     gene            759..2042
                     /gene="livM"
                     /locus_tag="VHX39_05065"
     CDS             759..2042
                     /gene="livM"
                     /locus_tag="VHX39_05065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter permease LivM"
                     /protein_id="HEX3990527.1"
                     /translation="MKRAFRDAGLSALIALGLFAPLIGLVTDNGDNGLILRARPIAVV
                     VVVVLVFAGRLLLLTRAAHVALPGVTKPPSAAMHRAGRAVAPALLVFALLLPFGGSRY
                     YVDLATLVLTYIMLGWGLNVVVGLAGLLDLGYVAFYAVGAYSYALLAVNFGLGFWTCL
                     PLAGILAAFWGVLLGFPVLRLRGDYLAIVTLAFGEIIRIVLNNWVSLTNGPNGITGIP
                     RPTLFGLTFSMEGGEGTFAGFFNMEPATIQRVIYLYYVILGLALLTNWFTLRLRRTPL
                     GRAWEALREDETACRSLGINVTNTKLTAFAIGAMFGGFAGAFFATRQAFISPESFTFI
                     ESATVLAIVVLGGLGSQLGVALAAIVMVGGLELLRSFLSFLADQMGSPLFAGIANELP
                     LYRMLVFGLALVIVMVLRPRGMVSTRTPTVILGRA"
     gene            2042..>2320
                     /locus_tag="VHX39_05070"
     CDS             2042..>2320
                     /locus_tag="VHX39_05070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012978411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3990528.1"
                     /translation="MLSVTGLTMRFGGLSAVDDLSFEAAAGDITAVIGPNGAGKTTVF
                     NCITGFYRPTVGDIALTNPQGVRFALDRMPGHQIASRAKVARTFQNVRL"
BASE COUNT          327 a          709 c          741 g          543 t
ORIGIN      
        1 cggcatcacc gccgtgccga tcgcattggc actgactttg gtgttcgcgg cggccctcgc
       61 ggcactgtat ggctggacgg tggagcgggt cgcctaccgg cccctgcgcg gctcctttcg
      121 cctggcaccc ctgatcagcg ccatcggcat gtccatcacg ttgcagaatt tcgtccaggt
      181 cagccagggc gcgcgggtca agccgatccc ggcactgatc cccggcggct tccagatcat
      241 ggagactgac ggcttcacgg tccggctcga ggggatgcag atcctgatcg tcgtcacgac
      301 gctgctcgtg ctgacgctgt tcacctggct ggtgacgcgg acgccgcttg gccggcgaat
      361 gcgcgcctgc gagcaggacc tgaggatggc gagcctgctc ggcatcgata ccgacctgac
      421 gatcagcatc accttcatca tcggcgcagc actcgccgcc gtcgccggac ttttgttcct
      481 gctgtattac ggcgtcatcg acttctacat cggcttcatc gcgggggtga aggcgttcac
      541 cgcggccgtc cttggaggca tcggcagcct gccgggcgcg gtccttggcg ggctgctgat
      601 cggcctgatc gaggtatttt ggtcggcgta tttcagcgtc gcctataagg acgtcgccgc
      661 cttctccatt ctgatcgtgg cgctgatttt ccttcccaac ggcatattgg gacgtgctga
      721 ggtggagaag gtatgacctc gggccggtgc gcagcgcgat gaagcgtgcg tttcgcgatg
      781 ccggactgtc cgccctgatt gcccttggcc tgtttgcgcc gctgattggt ctggtaacgg
      841 acaatggcga caatgggctc attttgcggg cgcggccgat cgctgtcgtt gtcgtcgttg
      901 tcctggtgtt cgccggccgc ctgttgctgc tgacgcgagc ggcacacgtg gccttgccgg
      961 gcgtgaccaa accgccgagc gcggcgatgc accgagcggg acgcgcagtg gcaccggcgt
     1021 tactggtgtt tgcgttgctg ctgccgttcg gcggatcgcg ttactacgtc gatctcgcaa
     1081 cgctcgtgct gacctacatc atgctcggct ggggtctcaa cgtggtcgtc ggcctcgccg
     1141 gcctcctgga cctgggctat gtcgcgttct acgcggtcgg tgcctattcg tacgcgttgc
     1201 tggcagtgaa tttcgggctt gggttttgga cctgcctgcc attggccggc atcctggcgg
     1261 cattctgggg tgtcttgctt ggtttccccg tgctgcggct gcgcggcgac tatctcgcca
     1321 tcgtgacgtt ggcgttcggc gaaatcatcc gcatcgtgtt gaataattgg gtgtcactga
     1381 ccaatggccc caacggcatt accggtatcc cgcggccaac gttgttcggc ctgaccttca
     1441 gcatggaggg cggggagggc acgttcgccg gattcttcaa catggaaccg gcaacgatcc
     1501 aacgggtgat ttatctgtat tacgttattc tgggtctcgc cctcctcacc aactggttca
     1561 ccctccgctt gcgccgcact ccactgggcc gtgcgtggga ggcattgcgt gaagacgaaa
     1621 ccgcctgccg ctcgcttggc attaacgtga caaatacgaa actgactgcg tttgccattg
     1681 gtgccatgtt cggcggcttc gccggcgcgt tcttcgccac caggcaggcg ttcatttcgc
     1741 cggagagttt taccttcatc gaaagcgcca cggtcctcgc gatcgtggtg cttggcggcc
     1801 ttgggtcgca acttggtgtc gcgctggcgg cgatcgtcat ggtgggcggc ctggaattgc
     1861 tgcgttcgtt cctgagcttt ttggccgacc agatgggcag tccgctgttt gccggcatcg
     1921 cgaatgaact gccgctgtat cgcatgctgg tgtttgggtt ggcattggtc atcgtgatgg
     1981 tgctgcggcc tcgcggcatg gtttccacgc gcaccccgac cgtcattctc ggccgcgcct
     2041 gatgttgtcg gtcaccggtc tgaccatgcg tttcggcggg ttgagcgccg tcgatgatct
     2101 ttcgttcgaa gccgcagcgg gtgacataac cgccgtgatc ggccccaacg gtgccggaaa
     2161 aaccacagtc ttcaactgta tcaccggatt ttaccggccc actgtcggcg acattgcgct
     2221 gaccaatccc cagggcgtgc ggttcgcatt ggatcggatg ccgggtcatc agattgcctc
     2281 ccgggccaag gtcgcgcgga cgtttcaaaa tgtccgtctg
//
LOCUS       DATAVD010000282         1618 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_957904, whole genome shotgun sequence.
ACCESSION   DATAVD010000282 DATAVD010000000
VERSION     DATAVD010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_957904"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1016
                     /locus_tag="VHX39_05075"
     CDS             <1..1016
                     /locus_tag="VHX39_05075"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3990529.1"
                     /translation="EELGFTHTWFYDTQMLVADPFVAMGGAALKTSRIRLGTGVLVPT
                     NRIPAVTAAGFATLNAMAPGRIDFGVGTGFSARRAMGLGAMKLADMEEYIRVVYALLN
                     GETTEAEVDPGVRKKIRFLNPELGLINIKDPIKLHISALGPKGRQMTARHGAAWKTVM
                     SGVDDGLAALRGMQKTWADSGRPAGDLYASAWVWGCLLRDGETLDSPRVRAEAGPRAA
                     VLLHRAADVDMEGWLNTSPVPDSVKAVLQGYVEAARRFEPADARYLMNHTGHCVAIKP
                     EEERFISAELIRQTTFTGTEQDIKQRIEAMRDGGLSQLVIPIVPGHEAAIEDWGRIAK
                     AFH"
     gene            complement(1024..>1618)
                     /locus_tag="VHX39_05080"
     CDS             complement(1024..>1618)
                     /locus_tag="VHX39_05080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003629619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEX3990530.1"
                     /translation="RAALYDKDREEHYNLISALHKSLRGSDPDAALYWFARMLNGGED
                     PRYIARRLVRFAAEDIGMADPNALTQALAGWETYERLGSPEGELAIAQVVVYLGTAPK
                     SNAVYTAFGQARAAAKNTGSLMPPAHILNAPTKLMKQLGYGAGYEYDHGTEDAFSGQN
                     YFPDGMDRVAFYQPKDRGFEREIGRRLEYWAELRAKR"
BASE COUNT          305 a          583 c          479 g          251 t
ORIGIN      
        1 ccgaggaact ggggttcacc cacacctggt tctacgacac ccagatgctg gtggccgatc
       61 cgttcgtcgc catgggcggg gccgccctga agacctcccg catccgcctg ggcaccggcg
      121 tgctggtgcc aaccaaccgc atccccgccg taaccgcggc cggtttcgcg accctgaacg
      181 ccatggcccc cggccgcatc gatttcggcg tcggcaccgg gttttccgcc cgccgggcaa
      241 tgggcctggg cgccatgaaa ctggccgaca tggaagaata catccgcgtc gtctacgcgc
      301 tgctgaacgg cgagaccacc gaagccgagg tcgatcccgg cgtccgcaaa aagatcaggt
      361 tcctcaaccc ggagctgggg ctgatcaaca tcaaggaccc gatcaagctg cacatctccg
      421 ccctcggacc caaaggccgc cagatgaccg ccaggcatgg cgccgcctgg aaaacggtga
      481 tgtcgggcgt cgacgacggc ctggcagccc tccgaggcat gcagaaaacc tgggccgaca
      541 gcggccggcc cgccggcgat ctgtacgcct ccgcctgggt ctggggctgc ctcctgcgcg
      601 acggagagac cctggacagc ccccgcgtgc gggccgaagc aggccctcgt gcggccgtcc
      661 tgctgcaccg cgccgccgat gtggacatgg agggctggct gaacacctcg cccgtgcccg
      721 acagcgtgaa ggccgtactg caaggctacg tcgaagcagc acgcaggttc gaaccagccg
      781 acgcccgcta cctgatgaac cacaccggcc actgcgtagc gataaagccc gaggaagaac
      841 gcttcatcag cgccgaactg atccgccaga caacgttcac cggcaccgaa caggacatca
      901 agcaacgcat cgaggcaatg cgcgacggcg gcctctccca actggtcatt ccgatcgttc
      961 cgggccacga agcggcgatc gaggactggg gccgcatcgc caaggccttc cactgaaccc
     1021 gaattaccgt ttcgcccgca gttccgccca atactccagc cgccggccga tctcgcgttc
     1081 gaacccgcga tccttcggct gatagaacgc gacccggtcc atcccatccg gaaaatagtt
     1141 ctggccggag aacgcatcct ccgtcccatg gtcgtattcg taccccgcgc catagccgag
     1201 ttgcttcatc agcttggtcg gcgcgttcag gatatgggcc ggcggcatca ggctgccggt
     1261 attcttcgcc gccgccctgg cttggccaaa cgcggtatag accgcattcg atttcggcgc
     1321 cgtgccgaga tagacaacga cctgagcgat cgccaactcc ccctccggcg accccagccg
     1381 ttcgtacgtt tcccaccccg ccagcgcctg agtcagcgca ttgggatcag ccatcccgat
     1441 atcctcggcg gcaaaacgaa ccagccggcg agcgatatac cgcgggtcct cgccgccgtt
     1501 cagcatgcgg gcgaaccaat acagcgcggc gtcgggatcg gacccccgca gcgacttatg
     1561 caaggccgag atcaagttgt agtgctcttc ccggtccttg tcgtacagcg ccgctcgg
//
LOCUS       DATAVD010000283         5576 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1888434, whole genome shotgun sequence.
ACCESSION   DATAVD010000283 DATAVD010000000
VERSION     DATAVD010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5576
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1888434"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..605
                     /locus_tag="VHX39_05085"
     CDS             <1..605
                     /locus_tag="VHX39_05085"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEX3990531.1"
                     /translation="VSPATQRVMSSALPKPMTLSEFLAWEERQELRYEFDGFAPVAMT
                     GGTAAHDRITFNLQKALDAQLTGKPCQPWGPNMKIIVDGRARYPDAFVVCQPVLSTAT
                     VADNPVVVFEVVSEGTTNTDLIDKNREYRATPSILRYVILQQTRAAAIVFVRHGRDWL
                     SEIVAGPDAILQLPEIDIEPPLAGIYANVVVEGQPTAPTE"
     gene            complement(607..1446)
                     /locus_tag="VHX39_05090"
     CDS             complement(607..1446)
                     /locus_tag="VHX39_05090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014250179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3990532.1"
                     /translation="MRTVQLRSGEQVSAIGQGTWYMGDRRTDAAREIAALQLGIDLGM
                     TLIDTAEMYADGGAERIVAQAVAGRRDEVFIVSKVYPQNASRSGVPAACERSLKRLNT
                     DRIDLYLLHWRGGHPLAETVAAFEALRKAGKIRYWGVSNLDVSDMEELFRAPGGDNCA
                     ANQVLYHPNSRGIEYELVPWCEQRQVAIMAYSPLGHTTSRLLRSPGLVSVAKRHGVTP
                     AQVALAWGLRFPHVISIPKASDPGHVRENAAAIDVALTDEDFAEIDAAHRPPGRKQPL
                     DLL"
     gene            complement(1446..2474)
                     /locus_tag="VHX39_05095"
     CDS             complement(1446..2474)
                     /locus_tag="VHX39_05095"
                     /EC_number="3.4.13.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006115163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HEX3990533.1"
                     /translation="MNDALAPDALALHRALVTLDTHIDIPWPPGPEPFQDGPRKVDMP
                     KMQRGGMSAGCFVAYVPQAARTPGGEDAAFARAIAMLDHINAMGRTENAITARVTPSA
                     DAVEAAKRDGVLAIVPCVENGFAIGTDLSRLAEFRARGARYLTLTHNGHNALADSCNP
                     RRDLGDRDSEHGGLSPIGQRAIHELNRLGIMVDVAHTSRDTMMQAAETSRTPIVSTHS
                     CVSALCDHSRNMTDWQLDIIRDVHGVIQITAVSAFLKPNARPEDVTTADFVNHIDYAV
                     KRIGIDHVGISSDFDGGGWFKDWRDAGDTANITIELVRRGYDRGALEKLWGGNFLRVM
                     RVVEEAAA"
     gene            2597..3178
                     /locus_tag="VHX39_05100"
     CDS             2597..3178
                     /locus_tag="VHX39_05100"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX3990534.1"
                     /translation="MLTLYFSPGSSAMATHIALHEVGVPFDTKYVALHKKENRSPDYL
                     ALNPEGKVPTLMIDGHILTEVAGTLYYLARRFPEAKLFPAGDIEAEAQVISWMSFIAS
                     TIHPARRVGPARLQEVFAIAEQKLAGRTWTVGEYSIADIHLFRLFWRWMDAGGPAPGS
                     LPGISAHYDRMMQRPAVRRVLEIESAVGYNLPA"
     gene            complement(3182..3502)
                     /locus_tag="VHX39_05105"
     CDS             complement(3182..3502)
                     /locus_tag="VHX39_05105"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3990535.1"
                     /translation="MERTPPPVSLAAALALPRTPGRSAEVFVDGDLEVRFAAKPTDGP
                     QVPHDKDELYFIAAGTARYRVADRVTEVGPGDVCFCAARVPHGFENNSDDFSVWVLFY
                     GPKQ"
     gene            3543..3980
                     /gene="tsaE"
                     /locus_tag="VHX39_05110"
     CDS             3543..3980
                     /gene="tsaE"
                     /locus_tag="VHX39_05110"
                     /inference="COORDINATES: protein motif:HMM:TIGR00150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEX3990536.1"
                     /translation="MLLTLPDLAATERFAADIAAVARPGDAILLSGPLGAGKTAFARA
                     FLRAAADDPTLEVPSPSFTLVQAYETRLGPVHHFDLWRLDGPAALAELGWEDARDDIV
                     LVEWPDRLGALTPPDALSLDFEPAEGSERIVRVDGWSGSLVHP"
     gene            complement(3957..4514)
                     /locus_tag="VHX39_05115"
     CDS             complement(3957..4514)
                     /locus_tag="VHX39_05115"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3990537.1"
                     /translation="MAKLLSNAPQRLHHHAYVVKDQEKNRQFFEDVLGIPLTATWCEK
                     HQSPWVNREVAFCHTFYSLADGGALAFFSFADDEVYEKTQAAKPAEIRSFDHIAFKVD
                     EAGYDELVARITAHGVPLRETDHGYCKSMYVESPDGLITEFTYDPPMEGGMTLLNRSD
                     AHAELARWMGGDHRTNNDLRVHETA"
     gene            4664..>5576
                     /locus_tag="VHX39_05120"
     CDS             4664..>5576
                     /locus_tag="VHX39_05120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3990538.1"
                     /translation="MDFDLFVIGGGSGGVRCARIASGHGARVGVAEERFWGGTCVNIG
                     CVPKKLLVQAGEYGAWADDAAGFGWTIAKEGHDWAALIAAKDREITRLEGIYRRLLAN
                     AGVTIFDARATFIDAHTLDVGGQRITAEKIVIATGGHPERPPIPGAELGIISDDAFYL
                     KELPKRIVVCGSGYIAVEFAGIFQALGAETHLVYRQPLPLRGFDEDIRVALAEALTAQ
                     GVIQHPSSQLKSLTADGDQRTLTFGAGETLTADLVFFATGRKPNTSGLGLDRAGVTAN
                     ANGAVIVDHKRQTLRKHIYAIGDVTDHM"
BASE COUNT         1034 a         1825 c         1698 g         1019 t
ORIGIN      
        1 gggtcagccc tgctacacaa cgcgtcatga gttctgccct gcccaaaccg atgaccctgt
       61 cggagttcct cgcatgggaa gaacgccagg agttgcgtta cgagttcgat ggcttcgcac
      121 cggtcgcgat gaccggagga actgcggcgc atgatcggat caccttcaat cttcagaagg
      181 cgctggacgc gcagttgacg ggaaagccct gccaaccatg gggcccgaac atgaaaatca
      241 tcgtcgatgg ccgcgcccgt tacccggacg cctttgtggt ttgtcagccg gtgctgtcca
      301 cggccacggt cgccgacaac ccggtggtgg tttttgaggt cgtcagcgaa ggcaccacca
      361 acaccgacct gatcgacaag aaccgggagt atcgcgctac gccatcgatc ctgcgctacg
      421 tcatcctgca acagaccagg gcggccgcga ttgttttcgt gcgccacggg cgggactggt
      481 tatccgagat cgtggccggt cccgatgcga tcctgcaact gccggagatc gatatcgaac
      541 cgcctctggc cgggatctac gcgaacgtcg tcgttgaggg acagccaacc gcgccgactg
      601 agtaggctac agcaagtcca acggctgctt gcgtcccggc ggccggtgcg ccgcgtcaat
      661 ctcggcaaaa tcctcatcgg ttagcgccac atcgatcgcc gccgcgtttt cccttacatg
      721 ccccggatcg gacgctttcg ggatcgaaat cacatgcggg aaccgcagcc cccaggccag
      781 cgcaacctga gccggtgtca ccccatgccg cttcgccacg gaaaccaacc ccggagaccg
      841 taacaaccgg ctggtcgtat ggcccagggg agaataggcc atgatggcca cctggcgctg
      901 ctcgcaccag ggcacaagtt cgtattcgat gccgcggctg ttcggatgat acagcacctg
      961 attggcggca cagttgtcac cacccggcgc acgaaacagt tcctccatgt cggagacgtc
     1021 caggttcgat acgccccagt accgtatttt acccgctttg cgcagtgcct cgaacgccgc
     1081 gactgtttcg gccagcggat ggccgccacg ccagtgcaac aaatacagat cgatgcggtc
     1141 ggtattcagt cgcttcaggc tgcgctcaca cgctgccggc acgcccgacc gagatgcgtt
     1201 ttgcggatac accttactca caataaaaac ctcgtcccgg cgtcccgcca ccgcctgggc
     1261 cacgatccgt tccgcaccgc catcggcgta catctccgcc gtgtcgatca gtgtcatccc
     1321 aagatcgatc cccagttgca acgctgcaat ttctcgggcc gcgtccgtcc ggcggtcacc
     1381 catgtaccag gtgccctggc cgattgcgct gacctgctcg ccggaacgaa gctgaactgt
     1441 gcgcattatg ccgccgcctc ctccaccacg cgcatcacgc gaagaaaatt gccgccccag
     1501 agtttttcca gcgcgcctcg gtcgtagccg cggcgcacca gctcgatggt gatgttggcg
     1561 gtgtcgccgg catctctcca atccttgaac cagccgccac catcgaaatc ggacgatatt
     1621 ccgacatgat cgatgccaat gcgtttcact gcgtaatcga tatgattgac gaagtcggcg
     1681 gtggtcacgt cctccggcct ggcattcggt ttcaggaatg ccgacaccgc ggtgatctgg
     1741 atgacgccgt gcacgtcacg gataatgtcc agttgccagt ccgtcatgtt ccgcgagtga
     1801 tcgcataatg cactgacgca ggaatgcgtg gacacgatcg gcgtgcgcga cgtctccgcc
     1861 gcctgcatca tggtatcgcg cgaggtgtgc gccacatcga ccatgatccc cagtcggttc
     1921 agctcgtgga tcgctcgctg gccaatgggt gacaacccgc catgctcgct gtcccgatca
     1981 ccgaggtcgc ggcgcggatt gcaactatcc gccagcgcgt tgtgcccgtt atgggtcagc
     2041 gtcagatagc gtgccccgcg agcccggaat tcggccagcc gcgacaaatc cgtgccgatg
     2101 gcaaaaccgt tctccacaca gggcacaatg gcgaggacac cgtcgcgttt cgctgcctcg
     2161 accgcatcgg cggatggcgt cacgcgggcg gtgatcgcat tttcggtccg gcccatggcg
     2221 ttgatgtggt cgagcatggc gatggcgcga gcaaaagcgg catcctcgcc tcccggagtg
     2281 cgagccgcct gcggcacata ggcgacgaaa cagcccgcgg acatgccgcc gcgctgcatc
     2341 ttcggcatgt cgaccttgcg cggaccgtcc tggaacggtt cggggccggg cggccaggga
     2401 atgtcgatat gcgtgtccag cgtgaccagg gcacggtgca gggcaagtgc atccggggcg
     2461 agagcgtcat tcatgccgcc agtctcgcgg aaattcggct gtaaaggaag aggctcgggc
     2521 ccaccgcttc ccgccggcgc gagaaaatgc caaatctggt ccgcttccgg ctccgtccaa
     2581 aacaagggat acgccaatgc tgaccctgta tttttccccc ggctcaagtg cgatggcgac
     2641 ccatatcgcg ctgcatgagg tgggcgtgcc gttcgatacg aagtacgttg ctctgcacaa
     2701 gaaagaaaac cgctcgcccg actacctggc gctgaaccct gaaggcaaag tgccgacgtt
     2761 gatgatcgat gggcacatcc tgaccgaagt cgccgggacc ctgtattacc tcgcccgccg
     2821 ctttccggag gcaaagctgt tccctgccgg cgacatcgaa gccgaagccc aggtgatttc
     2881 gtggatgtcg tttattgcgt caacgatcca tccggcacgg cgcgtggggc cggcgcggct
     2941 gcaggaggta tttgcgattg ccgaacaaaa actcgcaggc cggacctgga cggtcggaga
     3001 atactcgatt gccgacatcc acttgttccg gctgttctgg cgctggatgg atgccggcgg
     3061 accggcgccc ggaagcttac ccggcatcag cgcacattat gaccgcatga tgcagcggcc
     3121 cgccgtgcgc cgcgtgctgg agatcgagtc agcggtcgga tacaatttgc cagcgtaacg
     3181 actactgctt cggcccgtaa aacagcaccc agacgctgaa gtcatccgag ttgttttcaa
     3241 acccgtgcgg cacccgggct gcgcaaaaac acacgtctcc tgggccgacc tcggtcaccc
     3301 gatccgcgac ccgatagcgg gcggttccgg cggcgatgaa gtacaactcg tccttgtcgt
     3361 gcgggacctg cggtccgtca gtgggctttg cagcgaacct gacctcaaga tcgccgtcga
     3421 caaacacctc ggcagagcgt cccggcgtcc gcggcaacgc cagtgcggcg gcgagcgaaa
     3481 ccggtggcgg cgtgcgttcc atgactggtt ctccaggcag ataaaggctt cactggcaaa
     3541 cgatgctgct gaccttgccc gatctcgccg ccacggaacg tttcgcagcc gacattgcgg
     3601 ctgtcgcacg gccgggcgat gcgatcctgc tgtccggtcc gttgggcgcc ggcaaaactg
     3661 cgttcgcccg tgccttcctg cgtgcggctg cagacgaccc gacgctggag gtaccaagcc
     3721 ccagtttcac cctggtgcaa gcttacgaaa cgcgcctcgg cccggtgcat cacttcgacc
     3781 tgtggcgact cgacgggccg gccgcgctgg ccgaactcgg ctgggaggat gcgcgcgacg
     3841 acattgtgct ggtcgaatgg cccgaccgat tgggcgcact aacgccgccc gacgccctca
     3901 gcctggattt tgaaccggcg gaaggcagcg agcggatcgt ccgggtcgac ggctggtcag
     3961 gcagtctcgt gcacccgtag gtcgttgttg gtacgatgat cgccacccat ccatcgcgcc
     4021 agctcggcgt gcgcgtccga ccggttcagc aacgtcatcc cgccttccat cggcgggtcg
     4081 taggtgaact cggtgatcag gccgtccggc gactcgacat acatcgactt gcagtagccg
     4141 tggtcggttt cgcgcagcgg cacgccgtgc gccgtgatgc gggccaccaa ctcgtcatag
     4201 ccggcctcgt cgaccttgaa cgcgatgtgg tcgaagctgc ggatttccgc cggtttcgct
     4261 gcctgagttt tctcatagac ctcgtcatcg gcgaacgaga agaacgcgag cgcgccgccg
     4321 tccgccaggc tgtagaacgt gtggcagaat gcgacctcgc ggttcaccca cgggctttgg
     4381 tgcttctcgc accaggtggc ggtcagcgga atgccgagca cgtcttcgaa gaactgccgg
     4441 tttttctcct gatccttcac gacataggcg tggtggtgca ggcgttgcgg agcgttcgac
     4501 aacagtttgg ccatggttca cctcccagga tgtggcatcc accttgctac gaccgggctc
     4561 cgcgatcaag ttgtgtaacg cagagacggg cccacgcgcc cgcccgcaac gaggcaacac
     4621 tgacgcggac caaacaacgc cgctgatatg aggaatgagc cagatggact ttgatctttt
     4681 tgtcataggc ggcggctcgg gcggagtgcg ttgcgcacgc attgcctccg gccacggcgc
     4741 ccgtgtgggc gtcgccgagg aacggttctg gggcggcacc tgtgtcaaca tcggttgcgt
     4801 gccgaaaaaa ctcctggtcc aggccggcga atacggtgcc tgggctgacg atgccgcggg
     4861 cttcggctgg acgattgcca aggaagggca tgactgggcc gcgctgatcg ccgccaagga
     4921 ccgcgaaatc acccgcctgg aggggatcta tcgccggctg ttggccaacg ccggcgtgac
     4981 catcttcgac gcccgcgcca ccttcatcga tgcgcacact ctggatgtcg gcggccagcg
     5041 catcaccgcg gaaaagatcg tcatcgccac cggcgggcat cccgaacgcc cgccgattcc
     5101 cggagccgaa ctcggcatca tttccgacga cgcgttttac ctgaaggaac tcccgaagcg
     5161 catcgtcgtc tgcgggtccg gttatatcgc cgtcgagttc gccggcatct tccaggcgct
     5221 tggcgccgag acccacctgg tttaccgcca gccgctgccc ttgcgtggct tcgacgagga
     5281 catccgcgtg gccctggcgg aagccctcac cgcacaaggc gtcatccagc atcccagcag
     5341 ccaactgaag agcctgacgg cggacggcga ccaacgcacc ctgacgttcg gcgcgggcga
     5401 gacactgacc gccgatctgg tgtttttcgc taccggccgc aagcccaaca cgtccgggct
     5461 tggcctcgac agggctggcg tgacggccaa tgccaacgga gccgtcatcg tcgaccacaa
     5521 acggcaaaca ttacggaagc acatctatgc catcggcgac gtcaccgatc acatga
//
LOCUS       DATAVD010000284         3346 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2818055, whole genome shotgun sequence.
ACCESSION   DATAVD010000284 DATAVD010000000
VERSION     DATAVD010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3346
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2818055"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3105)
                     /locus_tag="VHX39_05125"
     CDS             complement(<1..3105)
                     /locus_tag="VHX39_05125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990539.1"
                     /translation="MTLVLATAPAFAQRGGRGGAPALPQNLAFRFMGPAVGNRIASAA
                     GVPSDPTVYYAGAASGGVWKSTDSGRTWAPIFDSQPVQAIGALAVSTSDPRQVWAGTG
                     EAWAIRDSDMIGNGIYKSMDAGATWQHMGLDETGRIGRIIVHPTNPNIVYACALGRTT
                     GPQEERGVFKTTDGGQNWTRVLFADPNTGCSGLNIDANDPNTLFAGMWQVEMHTYAMF
                     SGGPGSAIYVTHDAGAHWSRIEGHGLPKSPVGKIDVAPAPSNSKRVYALIQTADQGSI
                     WRSDDGGVNWTNGSWQRELIGRAGYYIKLAVNPKNPDEVFVANSSFWGSKDGGKSFTT
                     LGWGGDTHDIWIDPGNPNRILMTHDGGMFMTTDHGATSNRVTLPIGQMYHVAVDNDVP
                     YKVYGNMQDDGTMRGLSTVQEAGNNVPGQTPVAGRGGRAGRGGGGAGAWEHGLGGCES
                     GFTLPDLTNTDIVWASCYGNEVTRYDAKTKIARSISPWLHTLDSEPNKAKYRCHWTPP
                     LAVDPFDHNAVYYGCQVVFRTTSGGQAWSVISEDLSTRDPKYIVSSGGIVPDNLGQFY
                     GEVVFAIAPSEIQRGLVWAGTNDGKVWYTRDSLASSPRWTDVTKNIPNLPPQGVISKI
                     EPSHFDAGTAYICVDFHLADNRDPWVYKTTDFGKTWTKISGNLPTHGALTYARVIAEN
                     PNKKGMLFVGTGNALYYTLNDGQNWKQLNEGLPAAPVSWVVLQKAAHDVVVSTYGRGI
                     YIMNDITPLEQGLMEPSFTEAVALAAPRTAFREPRGGSADLSFKLAAAPKNPIEVDVL
                     DAKGALVAKLPPVTGHSGLNRIAWNMRYPGPRRVALRTTPPENPHIWEEPRFQGQDTR
                     PITHWGIEQAGNGPFAAPGDYTVKLTVDGQTVSKPLHIALPPDAHGSEADIQASVKLQ
                     LKVRDDISTVADMTNQLEWMRRQIEDEHKDVQGKTDLLKAMEAIDKKMKAVELNLVTE
                     SDMLSDDKYYPEQYKLLLNLIWLGGEIGGGAGDVAGTGDYGPTETDTAMVLDQERQLQ
                     TVQVE"
BASE COUNT          598 a          980 c         1043 g          725 t
ORIGIN      
        1 ttccacctgc actgtctgaa gttgccgctc ctggtccagc accatggcag tgtcggtttc
       61 cgtggggccg tagtcgccgg tgcccgccac atcgcccgcg ccgccgccaa tttcgccgcc
      121 cagccagatc aggttcagta agagcttgta ttgttccgga taatacttgt cgtcactcag
      181 catgtcggac tcagtgacca ggttcaactc gacagctttc attttcttgt cgatggcttc
      241 catggccttc agcagatccg tcttgccctg tacatccttg tgctcgtctt cgatttggcg
      301 ccgcatccat tccaactggt tggtcatatc ggcaaccgtg ctgatatcgt cgcgcacctt
      361 taactgaagt ttcacggaag cctggatgtc agcttcgctt ccatgcgcat cgggtggcag
      421 cgcaatgtgc agcggcttgg agacggtttg gccgtccacg gttagtttaa ccgtgtaatc
      481 gcccggagct gcgaatgggc cattaccagc ctgctcgatg ccccagtgcg tgatcggccg
      541 ggtatcctgg ccttggaagc gcggttcttc ccaaatgtgc ggattctccg gcggagtggt
      601 gcgcaaggcc acgcgccgcg gccctgggta gcgcatgttc cacgcgattc ggttcaggcc
      661 ggaatggccc gtaacgggcg gcagttttgc caccagcgcg cctttcgcat cgagcacgtc
      721 gacctcaatc ggattcttgg gcgcggcggc taacttgaaa cttaaatcgg cgcttccgcc
      781 gcgcggttcg cggaacgcgg tccgcggcgc cgccagggcg acggcttccg taaatgaggg
      841 ctccatcagt ccctgttcca gcggcgtgat atcgttcatg atatagatgc cgcgcccgta
      901 agtggaaact accacgtcgt gcgccgcctt ttgcagcact acccaggaaa ccggcgcggc
      961 gggaaggcct tcgttcaact gcttccaatt ctggccgtcg ttcagagtgt aataaagcgc
     1021 gttgccggtt cccacaaaga gcattccctt tttgttcggg ttctcggcga tcacgcgggc
     1081 gtaggtcagg gcgccgtgcg tgggcaggtt gccgctgatc ttagtccagg tcttgccgaa
     1141 atcggtggtc ttatagaccc acggatcgcg gttgtccgcc aagtggaaat ccacgcaaat
     1201 atacgccgtt cccgcgtcga aatgcgatgg ctcgatcttg gaaatcaccc cttggggagg
     1261 caggttgggg atgttcttgg tgacatcggt ccaacggggg gacgacgcca gcgagtcgcg
     1321 cgtataccag actttgccgt cgttggtgcc ggcccaaacc aagccgcgtt ggatttcaga
     1381 aggcgctatg gcgaagacca cttccccgta gaactggccg agattgtcgg gaacaatgcc
     1441 gccggaggag acgatatact tcggatcgcg tgtggaaaga tcctcgctga ttacagacca
     1501 ggcctggcct ccgctggtcg tgcggaaaac cacctggcaa ccgtagtaga ccgcattatg
     1561 gtcgaacgga tcgacagcca gcggcggcgt ccaatggcag cggtatttgg ctttattggg
     1621 ttcggaatcg agcgtatgca gccaaggact gatggatcgc gcaattttcg ttttggcatc
     1681 gtagcgagtc acctcgttac cgtagcagga tgcccaaaca atatcggtat tcgtcaaatc
     1741 gggcagagta aaaccggatt cgcagccacc caagccgtgt tcccaggcgc cggctcctcc
     1801 gccgccgcgg cccgcgcgtc cgccgcggcc ggccaccgga gtctgtccgg gcacgttgtt
     1861 gccggcttcc tgcaccgtgc tgaggccgcg catcgtgcca tcgtcttgca tatttccgta
     1921 gactttgtaa ggcacatcgt tatccacggc cacgtggtac atctgaccaa tcggcaaggt
     1981 gacgcggttc gatgtcgccc cgtggtcggt agtcatgaac atgccgccgt cgtgcgtcat
     2041 caggatgcgg ttggggttgc ccggatcgat ccagatatcg tgagtgtcgc cgccccatcc
     2101 gagggtggtg aagctcttgc caccgtcttt cgacccccag aagctgctgt tggcgacgaa
     2161 tacttcgtcg gggttcttag ggttgacggc gagcttgatg taatagccgg cgcggccgat
     2221 gagctcgcgc tgccagctgc cgttggtcca gttgacgccg ccatcgtcgg agcgccagat
     2281 ggacccctga tcggccgtct gaatcagggc gtaaacacgc ttggaattgg agggcgcggg
     2341 ggctacgtcg atcttgccga cgggcgattt gggaaggcca tggccttcaa tcctggacca
     2401 gtgcgcgccc gcgtcgtggg tgacgtagat ggcgctgccg ggtccgccgc tgaacatcgc
     2461 ataggtgtgc atttctactt gccacatgcc cgcgaacagg gtgttcgggt cgttcgcatc
     2521 gatgttcaga ccggagcagc cggtgttggg gtcggcgaaa aggacgcgcg tccagttctg
     2581 cccgccatcg gtggtcttaa aaacgccgcg ctcttcctgc ggcccggtgg tgcggcccag
     2641 cgcgcaggcg taaacgatgt tggggttggt gggatggacg atgatgcggc cgatgcggcc
     2701 ggtctcgtcg agtcccatgt gctgccaggt ggctccggcg tccatcgact tgtagatgcc
     2761 attaccgatc atgtcgctat cgcggatcgc ccaggcttcg ccggtaccgg cccacacctg
     2821 cctggggtcg gaggtagaaa cagccagcgc gccgatggcc tgcacaggct ggctatcgaa
     2881 aatgggagcc caggtacggc cgctgtcggt agatttccag acaccgccgg aggccgcccc
     2941 ggcataatat acggtggggt cgctcgggac gcccgcggcg gatgcgattc gattgccgac
     3001 ggccggtccc ataaagcgga atgcgaggtt ttgagggagt gcgggggccc cgccgcggcc
     3061 gccgcgctgt gcgaaagctg gcgcggtcgc cagcaccagt gtcaaaatgg atagtccaaa
     3121 gaaggtttta gaacctttgt ggcagaaaag gttagctcgt cgcataaatt gtactgagga
     3181 ttctataata ccttggatca actgtctcgg aagcatgttg gactcgatag aaggcgcgta
     3241 gccagccagt taccgcgggt tcgctgtcat agaggaacga tgcccggttg tcgtctccca
     3301 gtaatccatc cagcgttctc gaatcccctt agttcgctcg atcagt
//
LOCUS       DATAVD010000285         2651 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_958137, whole genome shotgun sequence.
ACCESSION   DATAVD010000285 DATAVD010000000
VERSION     DATAVD010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2651
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_958137"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            211..1344
                     /locus_tag="VHX39_05130"
     CDS             211..1344
                     /locus_tag="VHX39_05130"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX3990540.1"
                     /translation="MPAANSSIAYTNPYGVRLGPCNLCGFCERFGCFLYSKASPQTTI
                     LPILADRPTLEVRTNAYVTKILRDNTGKIATGVLYIDESGNEVEQPADLVILSAFQMH
                     NVRLLLLSGIGTPYDPATGKGVVGKNYAYQMCSQTAAFFSEDVEINPFIGAGAAGLRA
                     IDDFNGDHYDHSRFGFIGGSVIYAGATGGRPIEQMMLPPGTPRWGAGWKAAIRKHYRH
                     SAPIGTQGTVMSYRDRYLSLDPTYKDSHGLPLLRMTFDWHDNEYKMAAYSAAKMEQIV
                     RAMKPENQATLVMRKGNHYDTRIYQSTHTTGGAIIGSDPSNSVINRYSQSWDVSNLFI
                     YGASAFPQNIGYNPTGLLAGLAYFSAAKIRDTYLKSPGPLVPA"
     gene            1341..>2651
                     /locus_tag="VHX39_05135"
     CDS             1341..>2651
                     /locus_tag="VHX39_05135"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX3990541.1"
                     /translation="MKWRAALIAIGSAGVVGLLAAIGISYISDRNAGDADVSAVASTP
                     ELIARGAYLAKLGDCAACHSIQGKPAFSGGLRMVTPIGAIYSTNITPDDTDGIGRFTL
                     ADFDRALRFGVADGHTLYPAMPYTSYYNTTPQDVAALYAYFKHGVAAAGIPSRPSGIP
                     FPLSMRWPLTYWRWLFASRPEPFRPAPGMTQEVARGAYFVNGLGHGGECHTPRAITMQ
                     LKAIGPSDGPAYLSGAVIENFFAPSLRNGGPGTIGTWTDSELARFLKTGANPPGIAFG
                     SMTDVIVHSTQYLTDQDALAVAKYLKTIHAPGDPPAAPFTYDKAEHEALRNGDASKPG
                     AMVYLDNCAACHRPDGLGYARVFPRLAGNPVAEADNPLSLVTVVLQGSETPRTQGTPA
                     QFVMPAFAWRLSDQEVADAINFIRTSWGNHASPVTPKDVARVREQ"
BASE COUNT          511 a          847 c          784 g          509 t
ORIGIN      
        1 tcgaggaact ggaacctcat ttcgaccact tcgaaaaagt ctgcggtgtt tccggcacag
       61 cgggaaatct gaacggtcag atcaagccgg gggggcaatc cattcgaggg cccacgcagc
      121 gacgaattcc cgaccccgcc cattccgtcg atttatgcgg ctgatctgtt cgcgaaggcg
      181 gcggccgagt tcggctataa atcctttccg gtgccggccg ctaacagttc gatcgcctac
      241 acgaatccct atggcgtacg cctaggtccg tgcaatctct gcgggttctg cgagcgcttc
      301 ggctgttttc tctactcgaa agcgtcccca cagacgacga tcctgccgat tctcgcggat
      361 cgcccgacgc tggaggtccg aaccaacgcc tacgtaacga aaatcctcag ggacaacacc
      421 gggaagatcg cgaccggggt tctgtacatc gacgaaagcg gcaatgaggt cgagcagccg
      481 gcggatctcg ttatcctctc cgcgttccag atgcataacg tgcggctgct tctgctctca
      541 ggcatcggca cgccctatga tcccgccacc ggcaaaggcg tggtcggcaa gaactacgcc
      601 taccagatgt gcagccagac ggccgccttt ttcagcgagg atgtggagat caatccattc
      661 atcggtgccg gcgcggctgg tctgcgtgcg atcgacgact tcaacggcga tcattacgac
      721 cactcccggt tcgggtttat cggcggttcg gtgatctatg cgggcgcgac gggcggacgt
      781 ccgatcgagc agatgatgct gccgcccggc acgccgcgct ggggcgccgg ttggaaggcg
      841 gccatccgca agcattaccg gcattccgcg ccgatcggca cccagggcac ggtgatgtcg
      901 tatcgtgacc gttatctctc gcttgatccc acctacaagg actcgcacgg gctgccgctg
      961 ttgcgcatga ccttcgactg gcacgataac gagtacaaaa tggccgccta ttccgccgcg
     1021 aaaatggaac agatcgtgcg tgccatgaag cccgaaaacc aagcgacgct ggtcatgcgg
     1081 aagggcaatc actacgacac gcgcatctac cagtcgacac ataccaccgg cggcgcgatc
     1141 atcggttccg atccgtccaa tagtgtcatc aaccgctatt cgcagagttg ggacgtttca
     1201 aaccttttca tctacggtgc gtcggcgttt ccgcaaaata tcggctacaa tccaaccggt
     1261 ctgttggcgg gacttgccta tttttccgcg gcgaagatcc gggacaccta cctgaagtcg
     1321 cccggtccgc tggtgcccgc atgaaatggc gagcggctct tatcgccatc ggatcggctg
     1381 gcgtcgtggg gctactggcc gcgatcggga tctcctacat atcggatcgc aatgccggag
     1441 atgcagacgt ttccgccgtg gcgtccacgc ccgagttgat cgcccgaggt gcctatctcg
     1501 ccaagcttgg tgattgtgcc gcttgccaca gcatccaagg caagccagct ttctcgggcg
     1561 gccttcgaat ggttaccccg atcggcgcga tctacagcac gaatatcacg cctgacgata
     1621 ctgatggcat cggacgcttc accctggccg atttcgatcg cgcattgcgc ttcggcgtcg
     1681 cggatgggca cacgctgtat ccagcaatgc cctacacgtc ctactacaat acgactcccc
     1741 aggacgtcgc ggcgctatac gcctatttca agcacggcgt agccgccgcg gggattccca
     1801 gccggccgag cggcattccg tttcctcttt cgatgcggtg gccgctgacc tactggcgat
     1861 ggcttttcgc gtccagaccc gaaccattcc ggcctgctcc aggaatgacc caagaggtcg
     1921 cgcgaggcgc ctacttcgtc aacggcctgg gccatggcgg cgaatgccac accccgcgcg
     1981 cgatcacgat gcagctaaag gccatcgggc cgagcgatgg gccggcctac ctgtcgggcg
     2041 cggtgatcga gaattttttc gcgcccagcc tgagaaacgg cgggccggga acgatcggca
     2101 catggaccga tagcgaactg gcgcggttcc tcaagacggg tgccaatcct ccgggtatcg
     2161 cgttcggttc gatgaccgac gtcattgttc acagcacgca atacctgacc gaccaggacg
     2221 cgctggcggt agccaaatac ctgaagacga tccacgctcc gggcgacccg ccggcggctc
     2281 cgttcactta tgacaaggcg gagcatgaag ccttgcggaa cggcgacgcc agcaaaccgg
     2341 gtgcgatggt ttatctcgac aattgcgcgg cctgccatcg gccggatggc ttggggtatg
     2401 cgcgcgtctt cccgcgcctg gcaggcaacc cggtcgcgga ggccgacaat ccgctgtctc
     2461 tcgtgaccgt tgttctccag ggttcggaga caccccggac acaaggtacg ccggcgcaat
     2521 tcgtgatgcc cgccttcgca tggcggttgt ccgatcagga ggtcgccgac gccataaact
     2581 tcatccgcac cagttggggc aaccacgcct cgccggtaac gcccaaggac gttgccaggg
     2641 tcagggagca g
//
LOCUS       DATAVD010000286         3581 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1144139, whole genome shotgun sequence.
ACCESSION   DATAVD010000286 DATAVD010000000
VERSION     DATAVD010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3581
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1144139"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..710)
                     /locus_tag="VHX39_05140"
     CDS             complement(30..710)
                     /locus_tag="VHX39_05140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990542.1"
                     /translation="MTLRLTRRWALLLPLLLAACGGDDEVPAPVNDGGNFPPLRYGYL
                     PPIKLNVQRVEMVRDFSLPTGEDEMIGLSPVDPIETLFAMARDRLKPVAQSGSATFRV
                     VNASITRHRNTLTGVLAVRVDVHDGDNTGFAVARATADHSGEITSQRAAVYDLLKTMM
                     FQMNVELEYQIRNKLKAWVVDNQVAPAPQAQPAAPAAPPEPAPVAPSETPPEAAPEPP
                     PTEMPQPD"
     gene            complement(707..1663)
                     /locus_tag="VHX39_05145"
     CDS             complement(707..1663)
                     /locus_tag="VHX39_05145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEX3990543.1"
                     /translation="MSDTPAFLDGGRPPVPDIVVPRGVTPFFLPRRPVRGRIVRLGPL
                     ADRLLTRHANHPVVTALTGQALALAAALSTALKFEGSFSLQAKGDGPVRLLLADCTDT
                     GALRGYAQMNSERLEALLATDPAPSAEALLGKGFLAFTVDPGTGADRHQGIVAIEGAS
                     LADMALHYFRTSEQLRCLVHLACDQTPDGWRAAAFVLEKIAGAGGIDPEMSEDAQEEE
                     WRTATILAGTLTDAELLDDDLEPERLLLRLFHAEGVAVGRARALSFGCRCSRARLAGI
                     LEGFSTDDLDHMAVDGDIVMTCEFCNYDFRFPRGGVLGLEQR"
     gene            1734..2279
                     /locus_tag="VHX39_05150"
     CDS             1734..2279
                     /locus_tag="VHX39_05150"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3990544.1"
                     /translation="MSQTKGRIRHVALSVEDPWEPAEFYKDALGLQEVSELDGPLAEG
                     VFLTDGVVNLAILHFKTDEAAQGTGKDFVGLHHIGFWVDDVVEQGKIVRGTGAEWIMG
                     DPNNPDGYEVKHLDLSGIIFDIAAHGWAGAQKEPGQADNVVHPNPQRRLAKFDDRRAA
                     AKAKLAARKAKALMEAAIAAE"
     gene            complement(2393..2971)
                     /locus_tag="VHX39_05155"
     CDS             complement(2393..2971)
                     /locus_tag="VHX39_05155"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HEX3990545.1"
                     /translation="MKLWLTLGLVVLASHAARAADLFNLDQRYGSIAFSVTNFGAFSS
                     LGSFPRFMGKLQIDRAHPEQTKIDVEADATSVRVPWDNGTELLRGPEFFDIAHYREVR
                     FVSDAIKGIDPRHFLIQGTLEIRGIRRPLTLDATLEREHANTANGDEVADFSVSGTLH
                     RSDYGMTSQQIMISDQVTLQIAARIELPPQTK"
     gene            complement(2968..>3581)
                     /locus_tag="VHX39_05160"
     CDS             complement(2968..>3581)
                     /locus_tag="VHX39_05160"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEX3990546.1"
                     /translation="WLVLTKVRAVMVPRSGPKTVQLAQVLGLQETPMPVVWFSAEDSA
                     RAAALIPADRPVIALAPTANWALKVWPAERFVALFQRLSETHIPGAVPAVLAGPGETE
                     ALMATPVLQALPNAIDLVGRLSLPEIAAFLSRASLFVGNDSGLMHLAAAAGTPTLGLF
                     GPTDAVEYGPAGRRRSIVIGMDTQMASISVDAVVEAAARLLTA"
BASE COUNT          704 a         1159 c         1128 g          590 t
ORIGIN      
        1 cagacggaat gatgtcgccc gcgttatgat cagtccggct gtggcatctc ggtgggcggc
       61 ggttccggag cagcctctgg cggggtttcc gaaggcgcca caggcgcagg ctccggcgga
      121 gcggccggcg ccgcaggttg cgcctgcggg gcaggcgcaa cctgattgtc gaccacccag
      181 gccttgagtt tgttgcgaat ctgatattcc agttcgacgt tcatttggaa catcatggtc
      241 ttcagcagat cgtagaccgc cgcccgttgg ctcgtaatct cgccggaatg atccgccgtt
      301 gcccgcgcca cggcaaagcc cgtgttgtcg ccgtcatgga catccacccg aaccgcaagc
      361 acaccagtca gcgtgttgcg atgccgcgtg atggatgcat tgacaacccg gaacgtggcc
      421 gacccgcttt gcgcaaccgg tttcagccgg tctcgcgcca tcgcaaacaa agtctcgatc
      481 ggatcgaccg gcgaaagtcc gatcatctca tcctcgccgg tcggcaacga aaaatctcgg
      541 accatctcca cgcgctggac gttcagtttg atcggcggca gatagccgta acgcaacggc
      601 ggaaaattgc cgccgtcatt cactggagca ggcacttcgt cgtcgccgcc gcaggctgcc
      661 agcagcaacg gcaagagcag cgcccagcgg cgggtcaaac gcagcgtcat cgctgctcca
      721 ggccgagcac gccgccacgc ggaaaccgga aatcgtagtt gcaaaattca caggtcatga
      781 cgatgtcgcc atcgactgcc atgtgatcga ggtcatcggt tgaaaatccc tcgagaattc
      841 ccgccagccg cgcacgcgag cagcggcagc cgaacgacaa cgcccgcgcc cgccccaccg
      901 ctacgccctc ggcatgaaac agccgcaaca gcaaccgttc cggctccaga tcgtcgtcga
      961 gcagttccgc atcggtcagc gtgccggcca ggatcgtcgc ggtgcgccat tcctcttcct
     1021 gcgcatcctc gctcatttcc ggatcgatgc cgccggcgcc ggcgatcttt tccagcacga
     1081 acgcggcggc gcgccagcca tccggcgttt gatcgcaggc gaggtgaacc aggcagcgca
     1141 actgctcact ggtccggaag taatgcaggg ccatgtccgc cagagacgcg ccctcgatcg
     1201 ccacgatgcc ctgatggcgg tcggcgccgg tcccgggatc aacggtgaac gccaggaagc
     1261 ctttgcctaa cagcgcctcg gcactcggcg ccgggtcggt ggccagcaac gcctccaatc
     1321 gctcactgtt catctgcgca tagccgcgca gcgcgccggt gtcggtgcaa tcggccagca
     1381 acagcctcac cggtccgtcg cccttggcct gcaggctgaa cgagccttca aacttcagcg
     1441 cggtcgacaa agcggcagcc agtgccaggg cctgcccggt cagcgcggtc accacaggat
     1501 ggttggcgtg ccgggtcagc agcctatctg ccagagggcc aaggcggacg atgcggccac
     1561 gcacggggcg gcgcggcagg aagaacggcg tgacgccgcg cggcacgacg atgtcgggca
     1621 ccggcgggcg gccgccatcg agaaaggcag gggtatcgga catgcactca gcatataggc
     1681 ggcgcgtcca ttttcgacta ccatgcactg gcagaggaac caggaggctg ttcatgtcgc
     1741 aaaccaaagg ccgtatccgt cacgtcgcac tgagcgtcga ggacccgtgg gagcccgcgg
     1801 aattctacaa ggacgccctg ggattgcagg aagtgagcga actcgacggg ccgctcgccg
     1861 agggcgtgtt cctgaccgac ggggtggtga acctcgcgat cctgcacttc aagaccgacg
     1921 aagcggcgca gggcaccggc aaggatttcg tcggactgca tcacatcggc ttctgggtcg
     1981 atgacgtggt cgagcaaggc aagatcgtgc gcggcaccgg cgccgagtgg atcatgggcg
     2041 atccgaacaa tcccgatgga tatgaggtaa agcacctcga tctgtccggc atcatcttcg
     2101 acatcgccgc acacggttgg gctggcgcgc agaaggaacc gggtcaggcc gacaacgtcg
     2161 tgcacccgaa cccgcaacgc cggctggcga agttcgacga ccggcgcgcc gcggcgaagg
     2221 ccaagcttgc cgcacgcaag gcgaaggcgc tgatggaagc tgccatcgca gcagagtagt
     2281 cgccaaccgc aacgtcatgg ccgggcgcgt cccggctaac tccctgctgt gacaggtccc
     2341 cgggacgtag cccggggatg acggtgaggg gcggagacga ccgtgtgcgc tgctatttcg
     2401 tttgcggcgg caactcgatg cgtgcggcga tctgcagcgt gacctggtcg gaaatcatga
     2461 tctgttgcga ggtcatgccg taatccgacc tgtgcagcgt cccgctgacg gagaaatccg
     2521 caacctcgtc gccgttcgcc gtgttggcgt gttcgcgctc caacgtggcg tccagcgtca
     2581 gtgggcgcct gatgccgcgg atttccagcg tgccctgaat cagaaagtgc ctggggtcga
     2641 tgcccttgat ggcatcactg acgaaccgca cctcgcgata atgtgcgatg tcaaagaact
     2701 ccggcccgcg cagcaactcg gtgccgttgt cccagggcac tctgaccgat gtcgcgtcgg
     2761 cctcgacgtc gattttggtt tgctcggggt gggcgcgatc gatctgcaat ttgcccatga
     2821 atcgaggaaa cgacccgagt gacgaaaacg cgccgaaatt cgtcaccgaa aatgcgatcg
     2881 agccgtagcg ctggtccaaa ttgaacaaat cggcagcccg cgctgcgtga ctcgccagca
     2941 cgaccaaccc caaagtcagc cacaatttca tgcggtcaac aggcgggctg ctgcctcgac
     3001 cactgcatcc accgaaatgc ttgccatctg cgtatccatg ccgatcacaa tactacgacg
     3061 tcgtccggcc ggtccgtatt ccacagcgtc ggttggtccg aacagaccaa gggtcggtgt
     3121 gcccgccgcc gctgcgaggt gcatcagccc ggaatcgttg cccacgaaca gactggcgcg
     3181 agacaggaac gcagcaattt cgggcaaact gaggcgaccg accagatcga tcgcgttggg
     3241 caaagcctgc aaaaccggtg tggccatcaa tgcttcggtc tcccccggcc ccgcaagcac
     3301 cgccggcacc gcaccaggga tatgggtttc ggagaggcgc tgaaaaagag ctacgaacct
     3361 ctccgccggc caaactttca gcgcccagtt ggcggtgggg gcgagggcga tgacgggccg
     3421 gtcggcgggg atcagggcgg cggcacgggc actgtcctca gccgagaacc acacaacggg
     3481 catcggcgtt tcctgcaatc ccaatacctg ggctaactgc actgtctttg gaccggacct
     3541 ggggaccatc acggcacgga cctttgtcag taccagccac g
//
LOCUS       DATAVD010000287         3232 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_212794, whole genome shotgun sequence.
ACCESSION   DATAVD010000287 DATAVD010000000
VERSION     DATAVD010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3232
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212794"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            192..818
                     /locus_tag="VHX39_05165"
     CDS             192..818
                     /locus_tag="VHX39_05165"
                     /inference="COORDINATES: protein motif:HMM:TIGR03481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990547.1"
                     /translation="MVVIAAAPLSRRALAETAPSGATSTIQRFNGALLAAMKAGGQTD
                     FNRRFQALAPEIDQAFDLSAVLSVSVGSGWASFSPDQQSQLLAAFRRYTVASYVANFD
                     SYTGQDFIVSPDTRSLGADRVVVRSRIVKISGDATELDYVMKQTPLGWKVVDVLAGGS
                     ISRVAVQRSDFRRILSSGVDALLASLQRKTSDLSGGALGYRMSGNFLR"
     gene            1285..1554
                     /gene="acpP"
                     /locus_tag="VHX39_05170"
     CDS             1285..1554
                     /gene="acpP"
                     /locus_tag="VHX39_05170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011253554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEX3990548.1"
                     /translation="MGDETFKRVQSIIAAYLEIVPSKVMLPTSFVDDLHADSLDMIEL
                     IMAFEDAFDVMIPDIAMGTIVTVQDAVDYIKQQQRKPRRSGVPGS"
     gene            complement(1670..1822)
                     /locus_tag="VHX39_05175"
                     /pseudo
     CDS             complement(1670..1822)
                     /locus_tag="VHX39_05175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032492304.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
     gene            complement(1838..2038)
                     /locus_tag="VHX39_05180"
     CDS             complement(1838..2038)
                     /locus_tag="VHX39_05180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990549.1"
                     /translation="MSTMLFRAGVDNYLPVLTAEQTLYPAQQTLLSLKLAQLANLVTL
                     YKALGGGWNEHTVAIASAPPPL"
     gene            2599..>3232
                     /locus_tag="VHX39_05185"
     CDS             2599..>3232
                     /locus_tag="VHX39_05185"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3990550.1"
                     /translation="MQRGGLTDLTSFIAVADNLSFRAAASQLGVTPSALSHSMRQLEE
                     RLGIRLLHRTTRSVSVTDAGFRLLERLRPAMDQIGDALENLNQERSRPVGRLRIYATH
                     TAATAVIAPVWRRFLSTYPEVHLEVQVSEAPADIVAKGFDAGIGTQDRAAADMIAVRV
                     MGPLKVAVSGAPSYFAQRNPPRSPDDLARHRCIQYRRHVDGAIYDWWFERN"
BASE COUNT          612 a          965 c          999 g          656 t
ORIGIN      
        1 ggtgcacgaa tatggagagg gcgtccggct ccgggccgct ttgggcggac gaaatgaacc
       61 atcacggtta cgtcacgaac cggcttggta catgtatccc agagatagag ggggaagctg
      121 ccatgtttcc gaatgcaaat atcgctattg catccgttgt cctaggcttt acgcggcgat
      181 cgttgcttgg aatggtggtg atcgccgcgg cgccgctgag ccggcgcgct cttgccgaga
      241 cagccccgtc gggcgcgacc tctacgatcc agcgcttcaa cggggcactg ctcgccgcga
      301 tgaaggccgg tgggcagacc gacttcaacc gccggttcca agcactggcc ccggagatcg
      361 atcaggcatt cgatttgtct gccgtgctgt cggtttcggt cggctctggc tgggcgagct
      421 tttcgcccga tcagcagagc cagcttctgg ccgcgttccg ccgctacacg gtggcgagtt
      481 acgtggccaa ttttgatagc tataccggcc aggacttcat cgtttcgccc gatacacgca
      541 gccttggcgc agaccgggta gtcgtgcgga gccgaatcgt gaagatcagc ggtgacgcaa
      601 ccgaacttga ctacgtaatg aagcagacac ccttgggatg gaaggtggtc gatgtgctcg
      661 ccgggggttc gatcagccgc gtggcggtgc agcgctccga cttccggcgc atcctgtcca
      721 gtggcgtcga tgcgctgctg gcgagtcttc agcgcaaaac ctccgatctc tcaggcggcg
      781 cgctgggata ccggatgagc ggcaatttct tgcggtgatg gtaacagaac atgccatgtt
      841 acgagaacgg accagcccga tcatcgtcat tggttgcacc ggcctgatgg ccgagttcat
      901 cctaccgtgg tcggtaatct ggctctccaa caagtttttc tttgatatcc ctggatggtc
      961 gctgtggctc ctgttcggcg gtcccccggc cctcagcctt gcggccgcac tgatccattt
     1021 ggccttgcgg gcatggttaa agccaaccac ctcgtgcatg gggccacgaa ctacaagggc
     1081 gatagcccaa ctttcgcggt ctccagggca acgccggcca tgaccacagc cgagacagcg
     1141 aaaccgcggg aggcgtgcca ccaccctgcc aaggcggccg cgaatgcgga tttccgaagt
     1201 tcgtaccagg gcgaggctga tgatgttctt ccctgggata tgccgaaata cagaagtact
     1261 ttcacggggc gcagggacgg tctgatgggc gacgaaacat tcaaacgagt ccaatcaatc
     1321 attgcggcct atcttgagat cgtgccgagc aaggtgatgc tcccgacttc attcgtcgat
     1381 gacctgcatg ccgacagcct cgacatgatc gaactgatca tggccttcga ggatgcattc
     1441 gatgtcatga tcccggacat cgcgatggga accatcgtca ccgtgcaaga cgccgtggac
     1501 tacatcaaac agcagcaaag gaagccacgg cgttcaggcg taccgggttc gtagagcggc
     1561 ctggagaggt ctcgatattc tccgcggtcg ggctgcctgg cgtgattgat ccagtggctg
     1621 gtcgagaaca gcaatgaaca ggatcaaacc gcccagaacc tgagggggcc tacgctgctc
     1681 gccgaaacgg acgacgggcc caacactcgg cgacagcatg atcctggtcg agcgtcccgt
     1741 tcacgacgga ggctcgcatc ttcagcatca aatgagcgac cctcggaaac cagcgcatct
     1801 gctgtcatga gcgggaccgc tttcttgctg tcctgcgcta tagcggtggg ggcgcggagg
     1861 cgatcgcgac tgtatgttca ttccagccgc cgccgagtgc cttgtagagt gtcacgaggt
     1921 tggcgagttg tgccagcttc aggctcagta gcgtctgttg tgctggatac agggtttgct
     1981 ccgccgtcag gaccggaaga tagttgtcca cgccggctcg gaacagcatc gtggacaatc
     2041 ggacgctgtc tcctgccgcg tgtactgcgc caaactcgct tgggctgtat caaccgctgt
     2101 ctcggccatg ccatggctcg gcgcggcggt tcgccggatc gtcataaatc tacctcactc
     2161 aggtctgcgt atcgggggaa gaagaaggcg gcaaacggct ctcgccgcgc gtctcgcacg
     2221 gcgtccgcac cgccagcaat ctacgaagac ccgttcgcat ccgcagaccg gatggcagta
     2281 ctttgccatc tccatcatga tgtttccgcc aactttcggg gacttccatt caataacgcg
     2341 gcttgaccac ctggctatgc gggatttccg ccttattggc cggagcctca gcggcgtcac
     2401 ggcgccggcg cttaaccgtt caatgcggca gcttgaggaa cgtatgtgac gttgaccggc
     2461 accgggcgtc cgcctcctgg agcgtcttct ggcatgcaag ttcctcgcgc ggctggatgc
     2521 gcggccggaa acctgtcggc attgacaaaa attgaagctc tatattttat cgcatgcagt
     2581 actgagggga attcaggaat gcagcgcggc ggcctcacgg acctgacctc gttcatcgcc
     2641 gttgctgata acctcagctt tcgggcggcc gcatcccaac tcggcgttac accgtcggca
     2701 ctcagtcact ccatgcgcca gttggaggag cgtcttggta tacgcctgct gcatcgcaca
     2761 acgcgcagcg tatcggtcac cgacgcaggg tttcgtttac tggagcggct gcgtccggcg
     2821 atggatcaga tcggcgatgc cttggagaac ttgaaccagg agcgaagccg gccggtcggg
     2881 cgactgcgga tctacgcaac ccatacggcg gcaacggcag tgattgcacc ggtttggaga
     2941 cgcttcttat cgacctaccc ggaggtccac cttgaagtgc aggtgagcga ggcgcccgcc
     3001 gacatcgtgg cgaaggggtt cgacgccggt atcggaacgc aagaccgggc ggccgccgac
     3061 atgattgccg tccgggtgat gggaccgctt aaggtggccg tgtccggcgc gccgtcatac
     3121 ttcgcgcagc ggaacccgcc gcgctctccc gatgatctcg cccgccatcg ttgcatccag
     3181 taccgccggc atgtcgatgg cgccatttac gattggtggt tcgagcggaa tg
//
LOCUS       DATAVD010000288         1753 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1144433, whole genome shotgun sequence.
ACCESSION   DATAVD010000288 DATAVD010000000
VERSION     DATAVD010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1753
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1144433"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1111
                     /locus_tag="VHX39_05190"
     CDS             <1..1111
                     /locus_tag="VHX39_05190"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012226563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HEX3990551.1"
                     /translation="GDLQAAVQNAEAVFIAVGTPPRRGDGHADLTYVYAAVEQVAQAL
                     TAPTVIVTKSTVPVGTGRRIKEIVAAVRPDLEIDVASNPEFLREGSAIVDFMRPDRVV
                     IGSETDRAREVLSQLYRPLNLIETPIVHTGIETAELTKYAGNAFLAMKVTFINEMADL
                     CEKVGADVHDVARGIGLDGRIGRKFLHPGPGYGGSCFPKDTLALVRTAQDHGVPSRLV
                     ETTVLVNDARKSSMAMRVINACGGSVRGKTIAVLGLTFKPETDDMRDSPALPIVSRLT
                     GDGATIRAFDPEGMDQARPLLPESVIWCRDALDAAAGADAVVLVTEWNEFRALSPVRL
                     RDTMRGRVLVDLRNAWDPVAMRQAGFDYQGIGRPG"
BASE COUNT          329 a          574 c          510 g          340 t
ORIGIN      
        1 cggcgacctc caggccgccg tgcaaaacgc cgaggccgtg tttatcgccg tcggcacgcc
       61 cccccgccgc ggcgacggcc atgccgacct cacctacgtc tacgccgccg tcgagcaagt
      121 ggcacaggcg ctgactgcgc ccaccgtcat tgtcaccaaa tccaccgttc ccgtcggcac
      181 cggccgccgc atcaaggaaa tcgtcgccgc cgtccgcccg gacctcgaaa tcgatgtcgc
      241 ctccaacccc gagttcctgc gcgaaggcag cgccatcgtc gacttcatgc gcccagaccg
      301 cgtcgtcatc ggctccgaga ccgaccgcgc ccgcgaggtg ctgagccagc tgtaccgccc
      361 gctgaacctg atcgagaccc cgatcgtcca taccggcatc gaaacggccg aactgaccaa
      421 atatgccggc aacgcgttcc tcgccatgaa ggtcactttc atcaatgaga tggccgacct
      481 gtgcgagaag gttggcgccg acgtgcacga cgtcgctcgc gggattggcc tcgacggccg
      541 catcggccgg aagtttcttc accctgggcc cggctatggc gggtcctgtt tccccaagga
      601 cacgttggcg ctggtgcgca ccgcacagga tcatggtgtg ccgtcccgcc tcgtggaaac
      661 caccgtgctg gtcaacgacg cccgcaaatc cagcatggcg atgcgggtca tcaacgcgtg
      721 tggtggctcg gtgcgcggca agacgattgc tgtgcttggc ctgaccttca agccggaaac
      781 cgacgacatg cgtgattccc cggcgctgcc gatcgtttcg cgactgaccg gcgacggggc
      841 cacgatccgc gccttcgacc ccgagggcat ggaccaggct cgaccgctgc ttcctgagtc
      901 cgtgatctgg tgccgcgacg cgctggatgc cgcagcgggc gccgacgccg tcgtgttggt
      961 taccgaatgg aacgagtttc gcgcgctgtc gccggtgcgc ctgcgcgaca ccatgcgcgg
     1021 ccgcgtgctg gtcgacctgc gcaacgcctg ggacccggtc gcgatgcgcc aggcggggtt
     1081 cgactatcaa ggcattggcc ggcccggctg acgcgatacc gggcaatcca tttgaaataa
     1141 accgacgcat ggccggtgcg ccctgtcatt ccatccgggc ccgcagcggc caaaggatcg
     1201 cggcgcttaa attgagcctc attaatattt cgttaatccc gcgaggactt tcatcaaggt
     1261 caacccttta aattatgaat ccctccgcaa attatgaatc cctccgccag gcaaccgaat
     1321 cgctcacaca tggtgtcggg cagatagctt gattgatcgg accagcaccg agcaaataca
     1381 gacgtatgtt tcggatagtt gcaggcgaga tcgaatgcac cccacttcct cgttctgttc
     1441 tggcgaactg cgaactgatt tgtcgttcca cctcctcact acctgtgtcg attgcgccac
     1501 accggcagaa aaccccggaa ttctgcggtc tttggagggc tcctcgatat ctgctttctt
     1561 gtcaggaacg aagcgaagct gcaatcttag tgtcgtcagg gttcatgctt cgctttgctc
     1621 gccatgattg gttccttatt gccatgacgt gcggattgca ggggctgttg ggggttgaaa
     1681 acaacgatcg ctgggttgag aggacgcaat ggcaagcttt ccgtcggcaa aaatccgtga
     1741 ccggtaacac aaa
//
LOCUS       DATAVD010000289         2489 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3191406, whole genome shotgun sequence.
ACCESSION   DATAVD010000289 DATAVD010000000
VERSION     DATAVD010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2489
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3191406"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..224)
                     /locus_tag="VHX39_05195"
     CDS             complement(<1..224)
                     /locus_tag="VHX39_05195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009263 - deoxyribonucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HEX3990552.1"
                     /translation="MDGPPTLNGITHAADEHPVHFDLLTENPVYKPFRYPWAYEAWLT
                     QQRVHWLPEEVPLADDVKDWHRNLTDGERNL"
     gene            complement(428..760)
                     /locus_tag="VHX39_05200"
     CDS             complement(428..760)
                     /locus_tag="VHX39_05200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HEX3990553.1"
                     /translation="MEGNLSDRADRLTATLNTAFAPEVLCVTDDSAHHAGHVGIQGSA
                     GQGAVGQTHFSVLLVSETFRGMTRVARSRAVHAALAGEFGAVEAGGMHAMALTLRTPE
                     EHRTLERS"
     gene            825..1427
                     /locus_tag="VHX39_05205"
     CDS             825..1427
                     /locus_tag="VHX39_05205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HEX3990554.1"
                     /translation="MSRRPDRARAYAPDPAAPGRCCDLPGCGAPGEYRAPKSRRNLRE
                     YWWFCLEHVRAYNSSWDYYKGMSPAELEQELRSDTAWQRPSWPLGRLGSAAWEDEVLR
                     DPLHILASGGINTGGNRSRADKSRETPGDLREPLMALGLTWPTTLDAVKTRYKELAKR
                     HHPDANGGSRDAEERLKTINLAYATLRSRLVAEPRLASAG"
     gene            1629..>2489
                     /locus_tag="VHX39_05210"
     CDS             1629..>2489
                     /locus_tag="VHX39_05210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX3990555.1"
                     /translation="MNDAVEIRPTSAIDAPDTKVSVREMFDLDVDLEVPAFSVRTEHV
                     PDLDTSYKFDRETTLAIVAGFAHNRRVMIQGYHGTGKSTHIEQVASRLNWPCIRVNLD
                     SHISRIDLIGKDAIVLKDGKQITEFREGILPWCLQHACALVFDEYDAGRPDVMFVIQR
                     VLEVEGKLTLLDQNRVIRPHRSFRLFSTANTVGLGDTTGLYHGTQQINQGQMDRWNIV
                     ATLNYLPHAMETGIVLSKMGIDPKDMATKKRVESMVALADLTRAGFINGDISTVMSPR
                     TVITWAENARI"
BASE COUNT          485 a          778 c          756 g          470 t
ORIGIN      
        1 aggttgcgct caccgtccgt caggttgcgg tgccagtcct tgacgtcgtc ggcgagcggc
       61 acttcctcgg gcagccaatg gacccgctgc tgggtcagcc aggcctcata agcccaggga
      121 tagcggaacg gcttgtagac ggggttttcg gtgagcaggt cgaagtggac cggatgctca
      181 tcggcagcgt gggtgatgcc gttcaaagtg ggcgggccgt ccattatatg caccccatcg
      241 gcattgctcc ggttgcggtg gcggccccga atccgtgccc cgcgtcacca cggattgtgg
      301 tcgggtctcg gtgcgggcgc aagttgtagt gggccaggaa tgttgcgttc tcgcattttg
      361 caactgtcgg tagtttaaat tgaaccgccg gttgcagccg gcagtgcgct gatgccgttc
      421 gcaagtttca cgaccgttcc agagtgcggt gttcctcggg cgttcgcaga gtcagcgcca
      481 tcgcatgcat accgcccgcc tccaccgcgc cgaactcgcc ggcgagtgct gcatgcaccg
      541 cacgcgaacg agcgacgcgt gtcatgccgc ggaatgtctc gctgaccagc aggacgctga
      601 aatgggtctg gccaacagcc ccctgtcccg cgctgccctg aatgcccaca tgaccggcgt
      661 ggtgcgcgct atcgtctgtc acgcataaca cctcgggcgc aaacgccgtg ttcagcgtcg
      721 ccgtcaatcg gtccgcccgg tctgacaaat ttccttccac ccatgcagct aaccagtggg
      781 tttcgccatt gccaatcccc caccctgatg ctcatagtca ccctatgtcg cgacgacctg
      841 accgagccag ggcctacgcg cccgacccgg ctgctccggg ccggtgctgc gacctgcccg
      901 gttgcggcgc gcccggcgaa taccgcgcac cgaaatcccg ccgcaacctg cgcgaatatt
      961 ggtggttctg cctggagcat gtgcgcgcct acaacagttc ctgggactac tataagggta
     1021 tgtcgccggc ggagttggag caggaattgc gttccgatac tgcttggcag cgtccatcct
     1081 ggcctctggg ccgcctcggc tccgccgcgt gggaagacga ggtgctgcgc gatccgctgc
     1141 acatcctggc cagtggcggg atcaataccg ggggcaaccg gtcccgcgcc gataagtcac
     1201 gggaaacgcc aggcgatttg cgggaaccgc tgatggcgtt ggggctgacc tggccaacca
     1261 cactggacgc cgtcaagaca cgctataaag aactggcgaa acgacatcac ccggatgcca
     1321 acggcggtag ccgggatgcc gaggagcgtc tgaagaccat caatctcgct tatgcaaccc
     1381 tgcgctcgcg ccttgtggcg gaacccaggc tggcatctgc gggatagcgc tgcgctgatc
     1441 gaggaatttg actcgggaat tatgttgggc ggaacgaggg aaaccagtaa tgtatcgaaa
     1501 taatcaggcg cgggcgagga tgacccgtcc gtcaggacca taaacggctg aaccggaacg
     1561 ccggcagcct tgcatgggcg cgcaatcggc gtagactttc ccgaaattgc aacaggatac
     1621 tctggcctat gaacgacgcc gtggaaattc gcccgacctc cgcgatcgac gcgccggaca
     1681 ccaaggtgtc ggtccgcgaa atgttcgacc tcgatgtcga tctggaggtg ccggcattct
     1741 cagtccgcac tgaacatgtg cccgaccttg atacatccta caaatttgac cgggaaacca
     1801 cgctcgcgat cgtcgcgggc tttgctcaca atcgccgggt gatgatccag ggctatcacg
     1861 gcaccggcaa gtcgacccat atcgaacagg tcgcctcgcg gctcaactgg ccatgcatcc
     1921 gggtcaatct ggacagtcac atcagccgta tcgacctgat cggcaaggat gcgatcgtac
     1981 tcaaggacgg caagcagatc accgagttcc gcgaaggaat tcttccgtgg tgcctgcaac
     2041 acgcctgtgc gttggtgttc gacgaatacg atgccggccg gccggacgtc atgttcgtga
     2101 tccagcgcgt gctggaggtc gaaggcaagc tgacgttgct ggatcaaaac cgcgtcattc
     2161 gcccgcaccg ttcattccgc ttgttttcca ctgccaacac ggtcgggctc ggcgacacca
     2221 cgggcctgta tcacggcacg cagcaaatca atcaaggcca gatggaccgt tggaacatcg
     2281 ttgcgacctt gaactatctg ccgcacgcca tggagaccgg gatcgtgctg tccaaaatgg
     2341 gcatcgatcc gaaggacatg gcgaccaaga aacgggttga gagcatggtg gcactggccg
     2401 atctgacccg cgccggtttc atcaacggcg acatctccac cgtcatgtct ccacgcaccg
     2461 tcatcacctg ggctgagaac gcccgcatt
//
LOCUS       DATAVD010000290         8225 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3004605, whole genome shotgun sequence.
ACCESSION   DATAVD010000290 DATAVD010000000
VERSION     DATAVD010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8225
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3004605"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..198)
                     /locus_tag="VHX39_05215"
     CDS             complement(<1..198)
                     /locus_tag="VHX39_05215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HEX3990556.1"
                     /translation="MEWTIKLEARSGWGEVEIIEVGRLKRRVVGLTGDEVGLTLAEGK
                     DLLSELQRLVLQTQMEEYTMCA"
     gene            complement(252..584)
                     /locus_tag="VHX39_05220"
     CDS             complement(252..584)
                     /locus_tag="VHX39_05220"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX3990557.1"
                     /translation="MTPGKSILNVMRPDASEAPPACGPAPVPDQIGIVGLGHIGAAMA
                     TNLAAAGHQVIAYVRQPDQLDKLAKLGLTATNNFSSLFGCGTVITMLPDDAAVREVVL
                     GGSGKTQV"
     gene            complement(894..1535)
                     /locus_tag="VHX39_05225"
     CDS             complement(894..1535)
                     /locus_tag="VHX39_05225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEX3990558.1"
                     /translation="MAFTIEGIGVPDSGLARQITEFVRDTESPLLFHHSSRVFFWGAL
                     TGARRGLKFDAELLYAGAMFHDLGLTHQYSTPNERFEVDGANAARDFLRSNGIAQGDI
                     DTVWTAIALHTTPGIPQHMHPVIALVTAGVEMDVLGIAFTEFADAEREAVVQAHPRSD
                     RFKENIIQAFYDGIRHKPATTFGNVKGDVLADKDPQFVRANFCSVIRSSAWPA"
     gene            2115..3578
                     /locus_tag="VHX39_05230"
     CDS             2115..3578
                     /locus_tag="VHX39_05230"
                     /EC_number="1.11.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004096 - catalase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HEX3990559.1"
                     /translation="MSESKAFTNATGAPVADNTNIVTAGPRGPALLQDIWLIEKLAQF
                     DREVIPERRMHAKGWGAYGTFTVTHDITRFTRAKIFGAVGKQTPMFARFSTVAGERGA
                     ADAERDIRGTALKFYTEEGNWDIVGNNTPVFFFRDPLRFPDLNHAIKRDPRTGLRSAD
                     NNWDFWTLLPEALHQVTIVMSDRGIPKSFRHMHLFGSHTFSMINAANERVWVKFHFRT
                     QQGIANLTDAEASALVANDRESHGRDLLNAIEAGDSPRWTMFIQVMTESRAKSHKHNP
                     FDLTKVWPKRDYPLIEVGVMELNRYPDNFFAEVEQAAFSPANIVPGIGFSPDKMLQAR
                     LFSYGDTQRYRLGVNFNHIPVNAPKCPFQSYHRDGQMRADGNLGGTLSFHPNSAGLWS
                     NQPDFDEPPMPVDGDGAHWDHRVDDDHWEQPGNLFRNMTPAQQKVLFENTARAMGDAR
                     PHIKRLHVENCMRADPAYGTGVARALGMEFLPPATAQ"
     gene            3727..4053
                     /locus_tag="VHX39_05235"
     CDS             3727..4053
                     /locus_tag="VHX39_05235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX3990560.1"
                     /translation="MHRIPIVLLPLVALLVAAAKPDGSLIAHNGNGHGAPACTTCHGQ
                     HFEGTPTIHAPALAGLSAAMILARLAHYAGPTGHNAMMRQVATALSPAERQKVASYLA
                     ALPRPQ"
     gene            complement(4179..4604)
                     /locus_tag="VHX39_05240"
     CDS             complement(4179..4604)
                     /locus_tag="VHX39_05240"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3990561.1"
                     /translation="MAGRLVRSISVPTMPLIAIVDDDESVRLALQGFIRSIGLAAQVF
                     DSAADFLASANTSHVHCLILDVNMPGMSGLALHRQLVTSGQAIPTVLITANPDDATRA
                     EALRQGALCYLCKPFADNDLLACINIALGRAGPAGAKPP"
     gene            4908..5543
                     /locus_tag="VHX39_05245"
     CDS             4908..5543
                     /locus_tag="VHX39_05245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3990562.1"
                     /translation="MTETDPTIVVIDDDPDVREALGSLLRSVGLQARLLASVPEFLQA
                     GRPNGPTCMVLDVRLPGRSGLDFQRELTSANIHLPIIFMTGHGDIPMSVQAMKGGAIE
                     FLTKPFRDQDLLDAIQVGLAEDRARLEREKSLADLRARFGTLTAREREVMSLVVTGRL
                     NKQIAGDIGVSEMTVKVHRGQVMRKMRAGSLPDLARMADKLTLASEGGRRI"
     gene            5847..6758
                     /gene="rpoH"
                     /locus_tag="VHX39_05250"
     CDS             5847..6758
                     /gene="rpoH"
                     /locus_tag="VHX39_05250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HEX3990563.1"
                     /translation="MPSVTHNIPFDGGLSRYLQATRLAPMLTAEEESRLAHLWRDKSD
                     TEAADKLVTSHLRLVARIAAGYRGYGLPYGDLISEGNVGMMQAVRRFDPDRGFRLATY
                     AMWWIRAAIQEYVLHSSSLVKMGTTAAQKKLFFNLRRLKGQMNALDSGDLPPEQASQI
                     AAALDVPVCDVMTMNQRMAVPDQSLNAPVYDDGVEQWQDHMPDESESHETMLADQEEF
                     AMRKARLAKVFHVLDEREYHIVSERWLKEYPTTLEKLASRYRVSRERIRQLEVRALAK
                     LRKAMKVPVAPGPKAAVTGAVQTTAYA"
     gene            7094..7786
                     /locus_tag="VHX39_05255"
     CDS             7094..7786
                     /locus_tag="VHX39_05255"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HEX3990564.1"
                     /translation="MFGLLMDEAHARTVEGALPWSPGAAAPPAEAHPGPWLFFTPEEA
                     STVEALVDRLIPPDEKAPGGKDAGCAVFIDRQLAGSFGNASGRYMQPPFAAGTPQQGD
                     QSPLTPAQRYRSSLTALDRLSRARFAGKGFSAIAAGDQDTLISGLESGAVKLDGVDGK
                     AFFELLLQNTREGFFADPVYGGNRDMAGWKMIGFPGARYDYRDWIDRHNQRYPLQPVG
                     IMGRPAWNVAGD"
     gene            7824..>8225
                     /locus_tag="VHX39_05260"
     CDS             7824..>8225
                     /locus_tag="VHX39_05260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX3990565.1"
                     /translation="MARKLPATDVVVIGLGWTGAMLSHELLQEGLRVVAIERGPWRDT
                     ASSFPPGYAPDELRYAIRNGLLVQPAQTAMTFRNKPGQTALPIRSWSSFLPGNGAGGA
                     GVHWNGQTWRFLPTDFVARSHLTQRYGAGFLP"
BASE COUNT         1576 a         2573 c         2555 g         1521 t
ORIGIN      
        1 ggcacacatc gtatattctt ccatctgggt ctgcagcacg aggcgctgaa gttccgaaag
       61 gaggtctttg ccctcagcca gagttagccc aacttcgtca cccgtcagac cgacgacacg
      121 ccgcttgagc cggcccacct caatgatttc gacctctccc caaccgctgc gtgcttccag
      181 cttgatcgtc cattccatgg tctgcccctc ccgcacccta cattggggca atcgttcaca
      241 attcgagcca gtcagacctg tgtttttcca ctccccccaa gcacgacctc acggacggcg
      301 gcgtcatccg gcagcatagt gataacggtt ccgcaaccga acaggctgct gaagttattc
      361 gtggctgtga gaccgagttt tgcgagcttg tccaactggt ccggctgacg cacataggcg
      421 atcacctgat ggccggcggc agcgaggttg gtcgccatcg ccgccccaat gtgaccaagg
      481 ccgacaatgc cgatttggtc cgggaccggc gcgggaccgc atgcgggcgg ggcttcggac
      541 gcgtcgggac gcattacatt gaggatcgat ttcccggggg tcatgcgttg cctcgtgatt
      601 gcacgattga gtgacgcgac ttgcatctgc atcttgcgat cggtttcacc tgtcgacgtc
      661 ttaaagaata cttgcctcga tggtactcat cggctcgcga attggcgggt gacggccgat
      721 catgttgcgg gccgctctcc cagctatcga accagtgcca tttcctccat tttcaaggtc
      781 tgtgccatgc ccgcgatgta agccggctcc gaaccggcgt gccggtcgcg atggtgaata
      841 tcttggacga cgcccatggc agctcatgag ctacgatcag cccgagggaa tgcttacgcg
      901 ggccaggcgg agctgcggat cacgctgcag aaattcgcgc gcacgaactg cgggtccttg
      961 tcggcgagca cgtcgccctt gacgttgccg aacgttgtgg ccggtttatg ccggattccg
     1021 tcgtagaaag cctggataat gttttccttg aaacgatcgc tgcgtggatg cgcctgcacc
     1081 acggcctcgc gctccgcatc ggcgaattcg gtgaaggcga tgcccagcac gtccatctcc
     1141 acgcccgccg tcaccagcgc gatcaccgga tgcatgtgct gcggaatacc cggcgtggtg
     1201 tgtagcgcaa tggccgtcca cacagtgtcg atatccccct gcgctattcc gttgctacgc
     1261 aggaagtcac gggcggcatt cgcgccgtcc acttcgaagc gctcgttggg ggtgctgtat
     1321 tgatgcgtca gacccaggtc gtgaaacatc gcaccggcat agagcaattc ggcatcgaac
     1381 ttcaggccgc gccgcgcccc ggtcagcgcc ccccaaaaga agacgcggct ggagtgatgg
     1441 aacagtagcg gtgattccgt gtcgcgcacg aactcggtga tttggcgcgc cagtccgctg
     1501 tcgggcaccc cgattccttc gattgtgaaa gccatctcgt ttctcccgct tgatgtcgct
     1561 tactctgccg gccgggcttc ggagcgatcc ggcaagccgc ccctgaaatt gcgatgccgt
     1621 agctggaaac aagcactact agggaagggg gggattatac ttacgtttaa tacagcactc
     1681 tcgatttccg acgttgtctc ggcatcagtt ccttgcgaac gagagcatct cggcagggca
     1741 tcgtcgcgca gccttgtctc tgccagtcct tggtcggtgt gaagcgcatc ttcgcggtgg
     1801 cttgcccgtc cacggcagca cctggaatat ggtagaagac gattagacga aggtatagga
     1861 atgcccttcc gccggagtaa ttccctccca ctctgatttt gcgacgatgc ggcccgcttg
     1921 tcggcccaca ccggatccct atcgggcagt gcgcgtgatc ttgatcggag aacaagactg
     1981 gcggttgaaa ttgcagaaat cggagatcct gacagcagac ttgcccaaga gatcaccgaa
     2041 ctcgtgtgcg acaaacctcc caacgtggca tccgccggcg cacgaagcct tggctgttaa
     2101 tacaggagcc catcatgtct gaatcgaagg cattcaccaa cgccaccggc gcaccggttg
     2161 ccgacaacac caatatcgtg accgcgggcc cgcgggggcc ggcgctgctg caggatatct
     2221 ggctcattga gaagctggcc cagttcgaca gggaggtgat cccggagcgg cggatgcacg
     2281 cgaaaggctg gggcgcctac ggcacgttta cggtgacgca cgacatcacc cgcttcacac
     2341 gcgcgaagat cttcggcgcc gtcggcaagc aaaccccgat gttcgcacgt ttctccaccg
     2401 ttgccggcga gcgcggtgcc gcggatgccg agcgcgacat tcgcggcacg gcgctgaaat
     2461 tctacaccga ggaaggcaac tgggacatcg tcggcaataa cacgccggtg ttctttttcc
     2521 gcgacccgct gcgcttccct gacctcaacc acgccatcaa gcgcgaccca cgcaccggac
     2581 tgcgcagcgc cgacaacaac tgggacttct ggaccctgct gcccgaggcg ctgcaccagg
     2641 tgacgatcgt gatgtcggac cgcggcatcc cgaaaagctt ccgccatatg catctgttcg
     2701 gcagccacac cttctccatg atcaacgctg cgaacgagcg cgtgtgggtg aaattccatt
     2761 tccgcacgca gcagggcata gccaacctca ccgatgccga ggcatcggcg ctggtcgcca
     2821 atgaccgcga gagccacggg cgggatctgc tgaacgcgat cgaggcaggt gactcccccc
     2881 gctggacgat gttcatccag gtgatgacgg aatcccgggc gaaatcccac aaacacaacc
     2941 cgttcgacct caccaaggtc tggcccaagc gagactatcc gttgatcgag gtcggcgtga
     3001 tggaattgaa ccgctatccg gacaattttt ttgcagaagt ggagcaagcg gcgttctcac
     3061 cggcgaatat cgtgccgggc atcggcttct cgcccgacaa gatgctccag gcgcggttgt
     3121 tctcctatgg cgacacgcag cgctatcggc tcggcgtcaa cttcaaccat attccggtga
     3181 acgcgccgaa atgcccattc caaagctacc atcgcgacgg gcagatgcgc gcggacggca
     3241 atctgggcgg cacgctcagc ttccatccca acagtgccgg cctgtggtcg aaccagcccg
     3301 atttcgacga gccgccgatg ccggtggacg gcgacggggc gcattgggac catcgcgtgg
     3361 acgacgacca ttgggagcag cctggcaatt tgtttcgtaa catgactcca gcgcagcaga
     3421 aggtcctgtt cgagaatacg gcgcgcgcga tgggtgatgc acggccgcac atcaagcggc
     3481 ttcatgtgga gaattgcatg cgggccgatc cagcctatgg cacgggtgtg gcgcgtgccc
     3541 tgggcatgga gttcctgccg ccggccacgg cgcaatagcc gacagagcca aacacttccg
     3601 ccgccgtcgc ctgagaacgg cagcggcgtt gacaatgatt cacgcggcgc gtgcgcggtc
     3661 gccctactcg aaaacatccg gagcgatcgg ttaccgttcg tccatcgacg caaaaaggct
     3721 cgtcacatgc atcgcatacc tatcgtgttg ctcccgctgg tcgcgctcct cgtagctgcg
     3781 gcaaaaccgg atggcagcct tatcgcccac aacggcaatg gccatggcgc cccggcttgc
     3841 acgacctgcc atgggcaaca tttcgaaggc actcccacca tccacgcacc ggcactcgcc
     3901 gggctgtcgg cggcgatgat tctggcgcgg ttggcgcatt atgccggtcc gacgggacac
     3961 aacgcgatga tgcgccaggt ggcgactgct ttgagcccgg ccgagcgcca gaaggtcgcc
     4021 agctatctcg ctgccctgcc tcgaccgcag taacgggccc agcggttacc cgatcggcgg
     4081 ggatggcatg tcgatgcccg atagatgcgg tgctctcgca tcggtcaccc gcccggttcc
     4141 agacagaatc tgccgccgcc atgcgaaagc ggcggcgttc acggcggctt cgcgccggcc
     4201 ggcccggccc tgccaagagc aatgttgatg caggcaagca gatcgttgtc cgcgaagggt
     4261 ttgcacagat agcacaacgc cccttggcga agggcctcgg cgcgggttgc atcgtccggg
     4321 ttggcggtga tcaggacagt cggaatcgcc tgccccgacg ttacgagttg ccggtgcagc
     4381 gcgaggccgc tcatccccgg catgttcaca tccaggatca ggcagtgcac gtgcgacgtg
     4441 ttggccgagg ccagaaaatc cgctgccgaa tcgaaaacct gcgccgccag accgatcgac
     4501 cggatgaaac cttgcagtgc gagacggacg gactcgtcat catccacaat ggcaatcagc
     4561 ggcatcgtcg gcaccgaaat actcctgacc agacgaccag ccatgtggca tgccgcagcg
     4621 tcaggcccgg acgccgcagc ccgcataaag gtaggtcgcc ccgcaggact atgggagcgg
     4681 taacgtcctt agaccttggt acgggtgagg tgcgtccaag gtagcatctg tgtcgacttt
     4741 cgtccgcctg taacagccgg gtagactgcc cagcgtgcat gcgcttatcg tgcgaaacaa
     4801 ggttccggct gtgccaacca gggaccggat gatccggggt tgaccgcagc acgggatcgg
     4861 tctcacggag gccgaatggt gctggtgttg tggcaaaagc gctaacgatg actgaaacag
     4921 acccgaccat cgtcgtcatc gacgacgatc cggacgtgcg agaagcgctt ggcagtctgc
     4981 tccgctcagt tggcttgcag gcgcgattgc tcgcgtcggt gccggaattc ttgcaggcgg
     5041 ggcggccgaa cggtccgacc tgcatggtgc tggacgtccg gctgcccggg cgcagcgggc
     5101 tggatttcca gcgcgagctg acgtcagcca acatccacct gccgattatc ttcatgaccg
     5161 gccatggcga catcccgatg tcggtgcagg ctatgaaggg tggcgcgatc gagttcctga
     5221 ccaagccgtt ccgcgatcag gatcttctgg acgcgattca ggttgggctg gccgaagacc
     5281 gcgcccggct ggagcgagag aagtcgctgg ccgacctgcg cgcccggttc gggaccctga
     5341 cggcgcgcga gcgcgaggtg atgagcttgg tcgtcaccgg cagactgaac aagcagatcg
     5401 ccggcgacat cggcgtcagc gagatgaccg taaaggtcca ccgcggccag gtgatgcgga
     5461 agatgcgcgc cggttcattg cctgatctgg cgcgcatggc cgacaagctg acgctcgcct
     5521 cggaaggcgg ccggcggatc tgacccggcg gccggcaatc caacacgcgg ttgatggttc
     5581 ggttcgatgc cccccgcctt gccgcggccg cgtaccctcc gcggcggctc aggcgttaaa
     5641 ccttggtatc aggtgactgc ccattattga ttgccgactc ttcctctcgg ccaatagaac
     5701 cggccggtgt ctgaccacta tctttgccat gcttccagcg cggcccatct gaaccggccg
     5761 ttgtctgaca aagcaatgac gcaaaacacg gcggcctctg gcttttcgga cggagaccga
     5821 atgctgctca gggaaggtgg tcagtcatgc cctctgtcac tcacaacata ccgtttgacg
     5881 gcggtttatc acgctatctg caagcaaccc gcttggcgcc gatgttgacg gccgaggagg
     5941 agtcccgcct cgcccatctg tggcgcgata aaagcgacac tgaagcggcc gacaaactgg
     6001 tcacatcgca cctgcgcctg gtggcgcgga tcgcggcggg ctatcgcggt tacgggctgc
     6061 cgtacggcga cctgatcagc gaaggcaacg tgggcatgat gcaggccgtc cgacgattcg
     6121 atccggatcg cggcttccgc ctcgcgacct atgcgatgtg gtggatccgc gcggccattc
     6181 aggagtacgt gctgcattcc tcctcgctgg tgaagatggg caccacagcc gcccagaaga
     6241 agttgttctt caatctgcgc cggctgaagg ggcaaatgaa cgccttggac agcggcgatt
     6301 tgccgccgga gcaggcgagc cagatcgcag cggcgctgga tgtgccggtg tgtgacgtga
     6361 tgacaatgaa ccagcgcatg gcggtgccgg atcaaagcct gaatgccccc gtatatgacg
     6421 acggtgtgga acaatggcag gaccacatgc cggacgaatc ggaaagccac gaaacgatgc
     6481 tggccgatca agaggaattt gcaatgcgca aggcgcgact cgccaaggtt tttcatgttc
     6541 tggacgagcg tgagtaccac atcgtgagcg aacgctggct gaaggaatat ccaacgactc
     6601 tcgagaaact cgcctcccgg taccgcgtct cgcgcgaacg catccgccaa ctcgaagtgc
     6661 gggccttggc caagctgcgc aaggcgatga aggtaccggt ggcgccaggc ccgaaggcag
     6721 ccgtgactgg tgcagtccag accacggcct atgcctgatt tgcgcgcggc atgcagattc
     6781 tttcgatggt cgcgttcgct gggaacaacg gttgttccgc gcagaacagc gcccaggaca
     6841 tggcgcaggg ggacatggcg taggtggaca tggcgtaggt ggacatggcg taggtggatt
     6901 agacaaaggt gtaagccgct cctccggaat catgctcgct tctgcctctg atttcgcgac
     6961 gatgaaagtc acggttcgga ccacgccctg ccctggcgca ggccgcacca gaaaggcaat
     7021 tccgatgcta tcgcaagacc cccgatatcc tcgtcaccgc cgtcgcgaac tgctcgccgg
     7081 gatatcgacc ctcgtgttcg gtctgcttat ggatgaagcg cacgcccgga cggtcgaggg
     7141 cgctttgcca tggtcacccg gcgccgcggc gccgcccgcc gaggcccacc cggggccgtg
     7201 gctctttttc acacccgagg aagccagcac tgtcgaggcc ttggtcgatc gcctgattcc
     7261 gcctgacgag aaggcgccgg gcggcaagga tgcagggtgc gccgtgttca tcgatcgcca
     7321 gctcgcaggg tccttcggca atgcaagcgg gcgctacatg cagccaccgt tcgccgccgg
     7381 aacgccccag cagggcgacc agtcgccgct cacgccggcc caacgctatc gcagctcgct
     7441 caccgcactc gatcggctga gccgtgcaag gttcgccggc aaaggcttct ccgcgattgc
     7501 tgcgggcgac caggacacgc tgatcagcgg cctggaaagc ggcgcggtga aactcgatgg
     7561 cgtcgacggc aaggctttct tcgaactgct tctgcagaac accagggaag ggttcttcgc
     7621 cgatcctgtg tatggcggca atcgcgacat ggccggttgg aagatgatcg ggttccccgg
     7681 tgcccgttac gactatcgcg actggatcga tcgtcacaac caacgttatc cgctgcagcc
     7741 ggtcggcatc atgggtcgcc cggcatggaa tgtcgccggc gactgaggcg gggataaccc
     7801 aacaaaagac gcacgaggtc agcatggcaa ggaagcttcc ggctaccgat gtcgtcgtga
     7861 ttggtcttgg atggaccggc gcgatgcttt cgcatgagct gctgcaagaa ggactgcggg
     7921 tggtggcgat cgagcgtggg ccgtggcgcg ataccgcgtc cagctttccg ccgggttacg
     7981 cacctgatga gctgcgttac gcgatccgca acgggctgct cgtgcagccg gcgcagacgg
     8041 caatgacttt tcgcaacaag cccggccaga cggcgttgcc gatccgcagc tggagttcat
     8101 tccttcccgg caacggggcc ggcggtgcgg gcgtccattg gaacgggcag acctggcgct
     8161 tcctgccgac agattttgtc gcgcggagtc acctgaccca acgctatggc gccggcttcc
     8221 tgccg
//
LOCUS       DATAVD010000291         9513 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3378913, whole genome shotgun sequence.
ACCESSION   DATAVD010000291 DATAVD010000000
VERSION     DATAVD010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9513
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3378913"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..635)
                     /locus_tag="VHX39_05265"
     CDS             complement(<1..635)
                     /locus_tag="VHX39_05265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990566.1"
                     /translation="MAVLAAFGVSRGALAASVALATGNSVTTANGLTYTITGCTYILS
                     GVAQSSCATDNADLETSGAGRSAIMEVLSATPGGSVLSLAGTGTQTYSDLTFDLTVTS
                     TSPGVSLTSFTDMLAGSGSSAAAAEVTAGVSSSSTSPNINLTTSLSNLTDTASFTAFN
                     TATAPISLNVDLKVTTIPGNDGGITLTSVTYQAPEPASIALFGTALTGLVAV"
     gene            complement(830..1729)
                     /locus_tag="VHX39_05270"
     CDS             complement(830..1729)
                     /locus_tag="VHX39_05270"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX3990567.1"
                     /translation="MDGPAVRAQLAPAPSPSPLAPGNLKKPIFDTQTPVYDTAHAAEK
                     SASTVVAEVDGRAVTLGDVGDAIKELPANVAAMPFAELYPTVLAKLVRQQALVIRAQQ
                     QALDEDPTVRRRVKAAGDQVMANALLHEEISRGITEQALLDRYNKEVAGKPGPEEVHV
                     RVIMAPTEQAATALIAELKSGADFATLAKRSSQDSTAAIGGDLGYARRDGLNPEVGAV
                     AFSLQPGQFTPFPVRSAGGWFIVKVEDRKRAGTPTFAEVRERLVQEMLREGVAGVVTK
                     ALAGTTVREYNINGKEVASGASN"
     gene            complement(1894..2568)
                     /locus_tag="VHX39_05275"
     CDS             complement(1894..2568)
                     /locus_tag="VHX39_05275"
                     /inference="COORDINATES: protein motif:HMM:TIGR02595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-CTERM sorting domain-containing protein"
                     /protein_id="HEX3990568.1"
                     /translation="MAGPACAQTVALSTSSATQIVAGTIYQFGDTTFSFTCTTGCSSL
                     ALLGVTNGDGSEIEIEGNPPSSVIFSGAAGGTQYGNTLGITVGQITGSKGISSVTNIV
                     SGSLAVSGDTADENLVSSGLSSFSNPLTNVSPASATSNLSTPLTTVSFNNSLSSFSFD
                     DQLLDSTGSGKPNDALTLTNVALLFQPAPEPASIALFATGLIGLTAARRRFSRCAKRK
                     AATAHC"
     gene            complement(2814..3494)
                     /locus_tag="VHX39_05280"
     CDS             complement(2814..3494)
                     /locus_tag="VHX39_05280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEX3990569.1"
                     /translation="MNPVVAIFGNQAELAEHLLAALGSEGDDGSHDRSHLLRVWRNAI
                     AIANEEPGCDRTVLTAAVILHDCVAVEKNSPQRSAASRLAATRARLILAELGWDAVRI
                     DATAHAIEAHSFSAGIVPETVEARIVQDADRLDAIGAIGIARCFYVAGRMGSGLYDPG
                     DPLAARRDLDDRRFALDHFGAKLFKIAGNFQTKAGQAFADTRTRAMREFVGALMNEIG
                     DLAGNDEQ"
     gene            complement(3614..4633)
                     /gene="dctP"
                     /locus_tag="VHX39_05285"
     CDS             complement(3614..4633)
                     /gene="dctP"
                     /locus_tag="VHX39_05285"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HEX3990570.1"
                     /translation="MSAAVGRRILLGSALAAPFIRTARANPIQMRVSVDTTPTHGRTR
                     SIADFLKKLEAASQGEIAPRLFDSGQLFADRDVIKALVLGQVEMAAPGTWLVSSYVPE
                     ADFAQLPIFYGQPIETTHRAIDGIPGDIVNQQVAKKLRVKIPGRWIDLGFTNWYGTRK
                     PLTSLADLKGLKIRNSGGFAQPWRARFFGAVPSMTAWPDVPLALSQGTFDALQSTNES
                     CASAKLWDAGLRYGLIDHQSMGDYIPMISNAFWDTLSPAMKTLITDLWAANIGIYRTN
                     LATDQETAEKTLQAKNVKLSFVPKPELEAARKQMMADQEKVAQEMRISPDILARINEA
                     VAAAN"
     gene            complement(4630..6003)
                     /locus_tag="VHX39_05290"
     CDS             complement(4630..6003)
                     /locus_tag="VHX39_05290"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX3990571.1"
                     /translation="MTLTSSPLTRSLGQFVADLSPNRLPEEAARIARMGFIDTIGTMI
                     AGRNEDSVRIMTETLAPGDGPATLTFGDRKAPAPDAAWINGTAAHALDYDDVALRGHP
                     STVLVPAILAEAEHLGSSGADMITAYVAGYETWAELFRRDTGLLHQKGWHPTGLYGAV
                     GAAAACAKLRKLDAEKSAIAIALGASQSAGLMSNFGTMTKPFHAGKAAHAGIMAARLA
                     EAGFTANTDALEHPQGFLHAISPTGTEDRVSESKAGTEWAILTQGLGIKKYPTCYCTH
                     RAIDCMLDLVKASPIRVDDVEKITVNISDYFSTVLRNHQPDTGLAAKFSIEFCMASGI
                     VAQRVGLRELTDDFVQRPDIQALMKKVEIVTTSTYDPELPGAAPHDQVTVTLAGGRRL
                     EGDPVARATGHPTRPLTDQQIFEKFADCLDAGDSPIPADILFKRLSAIQSINARDLTA
                     PASINRA"
     gene            6245..6670
                     /locus_tag="VHX39_05295"
     CDS             6245..6670
                     /locus_tag="VHX39_05295"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HEX3990572.1"
                     /translation="MLRRSLALAGFAVLLAGTASAATEKFSATLTPAAEVPPTKSTGS
                     GMATVSLDTTTHEITYNVTFSGFSSAVAAAHIHGPAAAGKNAGVVVPLGNKPTSPIHG
                     TAKLTAEQQKELVAGQYYVNVHTKNNPGGAIRGQLAAAQ"
     gene            complement(6736..7269)
                     /gene="ppa"
                     /locus_tag="VHX39_05300"
     CDS             complement(6736..7269)
                     /gene="ppa"
                     /locus_tag="VHX39_05300"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEX3990573.1"
                     /translation="MRIDAIAIGKNPPDDVNVIIEVAIGGEPIKYEMDKEAGTLVVDR
                     FLYTPMRYPGNYGFVPHTLSDDGDPIDVLVANTRPIVPGAVINCRPVGVLKMTDESGG
                     DEKIIAVPSPKLTQRYTNVYNYTDLPAITLEQIQHFFEHYKDLEPGKWVKVDGWGDAA
                     EAKALIVDAIQRSKSKG"
     gene            complement(7384..8205)
                     /locus_tag="VHX39_05305"
     CDS             complement(7384..8205)
                     /locus_tag="VHX39_05305"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HEX3990574.1"
                     /translation="MEFLGVHTFGFIWDRDAAQATEDLAAEGFRHFQYLAGSPHLDPW
                     SADRAVLTATRRAVDRIGGSILAVDLPSSETNLASVNGAVVDFSVSAYLKALDLASDL
                     GARWLTINSGRKHGLLPPPDDRLLGIYRGALERLVRAAQPRGVRLLLENIPGMLLAEA
                     PAAKAFLDHEDYGNVDVLYDVTNAAAIGEDPADGIRTLAERISLVHLSDAPPGQWRHD
                     PIGTGVIDFGAIRGALTDVGYTHGVVIEAISQDTLPDLIASRQRLDAMGWHFSQG"
     gene            complement(8369..>9513)
                     /locus_tag="VHX39_05310"
     CDS             complement(8369..>9513)
                     /locus_tag="VHX39_05310"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEX3990575.1"
                     /translation="PFFLYALGNCQFLTGDCTEAAVALTTATRIDPTRAEAFNDLAAT
                     LFVLGRDAEALACLRRSLTLRPDLPEAQETDAMWLLRYGRFHEGWRKYEARFRTRANR
                     HLWRSFAQPNWEGEKLGGRTILLHAEQGLGDALQFARYAPLVAARGGRVILQAYAEIV
                     PLLTKLPGVATLIDTATAPPRFDVHCSLLSLPRVFGTDLDSIPAAVPYLTVPEARMAH
                     WRHKLGPRRALRVGVAWSGNPKHRDDARRSIPFDVFATLLTDRPDIELHVLQTGLRPA
                     DRAGLQDRPWVRNHADVPQDFGDAGALVSLMDVVISVDTSIAHLAGALDRPVWLLLAN
                     LADWRWMMERDDTPWYPSMRLLRQPERGDWASVLSVVAARLGEMLP"
BASE COUNT         1696 a         2926 c         3079 g         1812 t
ORIGIN      
        1 acggcgacca atccggtcaa agcggttccg aacagcgcga tcgaagcggg ctccggtgcc
       61 tgataagtaa cgctggtcag ggtgattcca ccatcgtttc cgggaatcgt cgtcactttc
      121 agatcgacgt tgagagatat cggtgctgtc gccgtattga aagccgtgaa gcttgcggta
      181 tcggtcaaat tggaaaggct cgtggttaaa ttgatattgg gtgatgtgga tgacgaactg
      241 acaccggccg tgacttcggc tgcggccgct gaactgccgc taccggcgag catatcggtg
      301 aaggatgtga ggcttacgcc cggggaggtt gatgtcaccg taagatcgaa ggttaggtca
      361 ctgtacgttt gtgtgccggt tccggcgaga ctgagcacgc tgccaccggg tgtggcgctc
      421 aacacctcca tgatggccga gcggcctgcg ccggatgttt cgaggtccgc attgtctgtc
      481 gcgcaactac tctgtgcgac accggacaaa atgtacgtgc agccggtaat cgtgtaggtc
      541 agtccgttcg cggtggtcac ggagttgccg gtcgccaacg caacagaagc ggccaatgca
      601 ccgcggctta cgccgaacgc ggcgaggact gccaagctca gaacctgata tttccagcct
      661 gatcgcaaag gtcagccctc aacttcaacc cgcgcgcttt ttggggcgaa atcgccgggt
      721 aacgatgatg tatcataacc aaatctgaga gtaaacagcg ttcgatgcgt cttttatgat
      781 ataattgcgg gaaaatgcgc ctgtattgga atcatgagat ttggggatat cagttgctcg
      841 cgccgcttgc gacctctttt ccgttgatat tgtattcgcg cacggtggtc cctgccagcg
      901 ccttggtcac cacgccggcg acgccttcgc gcagcatttc ctggaccagc cgctcccgaa
      961 cctcggcgaa tgtcggcgtg ccggctcgct tccggtcctc gaccttgacg atgaaccatc
     1021 cccccgcgct gcgcaccgga aagggagtga actggccggg ttgcaaggag aacgcgaccg
     1081 cgccgacctc cgggttcagc ccatcccgcc gggcgtaacc caggtccccg ccgatggcgg
     1141 ccgtggaatc ctggctcgat cgcttggcga gcgtcgcgaa gtcggcgccg gatttcagtt
     1201 cggcgatcaa ggccgtggcc gcctgttccg tcggtgccat gatgacccga acgtgcactt
     1261 cctccggacc gggtttgccc gcgacctcct tattataccg gtcaagcagc gcctgttcgg
     1321 tgattccgcg cgaaatctcc tcatgcaaca gtgcattcgc catcacctgg tcgccggcgg
     1381 ccttgaccct gcgccgcact gtcggatctt catcgagcgc ctgctgctgg gcccggataa
     1441 ccagcgcctg ctgccggacc aatttcgcca ggaccgtggg gtacaactcg gcaaacggca
     1501 tcgccgccac gttggccggc agttccttga tggcgtcccc cacgtcgccc agggtgaccg
     1561 cgcgtccgtc gacttcagcc accacggtgc tggcgctttt ctccgctgcg tgggcggtat
     1621 catacaccgg cgtctgcgtg tcgaagatcg gcttcttcag gttgccgggt gccaggggtg
     1681 aagggctcgg ggcaggcgcg agctgcgccc gaaccgccgg gccatccatg ctcgcgcaga
     1741 taaggaggat aagcgcgcaa gatagccatc gattgcgagg agacatgtct aaccgtttga
     1801 actcattgcc tgccgaccgc ccatagcaca gtccggccgg gcgacgcgac aacgcaatat
     1861 cgtggcaaga gacgctgcgc cgctggtggc gtctcagcaa tgcgctgtgg cggcctttcg
     1921 cttggcgcag cgagaaaatc ggcggcgagc agcggtcaag cctatcaggc cggtggcgaa
     1981 cagggcgatc gaggcaggtt ccggtgccgg ttggaagagt agcgccacgt tggtcagcgt
     2041 cagcgcgtcg ttcggctttc cgctgccggt actgtcaagc aattgatcgt cgaacgagaa
     2101 tgaactgagc gaattgttga aactcaccgt ggtcagtggc gtggacagat ttgatgtggc
     2161 cgatgcagga ctgacattgg tcaggggatt gctgaagctg ctcaacccgg aggaaaccag
     2221 attttcgtcg gcggtgtccc cggataccgc cagcgaacca cttactatat tggtaacgga
     2281 tgagatgccc ttactgccgg ttatctggcc aacggtaata ccgagggtgt tcccatattg
     2341 cgtgccgccc gcggcaccgc tgaaaatcac ggaagagggg ggattccctt ctatttcgat
     2401 ctccgacccg tcgccgttcg tgaccccgag cagtgcgagg ctgctgcagc cggtggtgca
     2461 ggtgaaactg aaggtcgtat cgccaaactg gtagatggtt ccagcaacaa tctgcgtagc
     2521 ggaggaggtg gacagcgcta cggtttgagc gcaggccgga cccgccacgc caagaaccgc
     2581 cagcagcgca atcccggagc tggcgtactt ccaaacgtct gacatatccc cccgcaaccc
     2641 catcgaaaat cacgtccgtc aagtccccgg aagtggtatg gcagggggat tcgttggtgt
     2701 aaagtccaat atttataact tatcgccgat caggaatttt acactattct tggatatgaa
     2761 accaatttga aactcttttc tggtagcgcg aagcattttg cttcatgaca attttattgt
     2821 tcgtcattcc cggccaaatc gccgatttca ttcatcaggg caccgacgaa ttcacgcatc
     2881 gcgcgggttc ttgtgtcggc gaatgcctgg cccgccttgg tctgaaaatt tccggcgatc
     2941 ttgaacagtt tggcgccaaa atggtcgagc gcgaagcgcc ggtcatccag atcccggcgc
     3001 gccgctagcg ggtccccggg gtcgtagaga cccgatccca tgcgtccggc cacgtagaag
     3061 cagcgggcga tgccgattgc gccgatcgcg tccaaccggt cggcgtcctg cacgatgcgt
     3121 gcctccaccg tttccggcac gataccggcg gagaaactgt gcgcctcgat cgcatgcgcc
     3181 gtggcgtcga tccgaaccgc atcccagccg agttccgcca ggatcaaacg agcacgggtc
     3241 gcggccagtc gagacgccgc ggaccgctgc ggcgagttct tctctaccgc cacacagtcg
     3301 tgcaggatga ctgcggcggt caggacggtc cggtcgcatc ctggctcctc gttggcgatg
     3361 gctatcgcgt tccgccagac gcgcagcagg tgggaccggt cgtgcgatcc gtcatcgcct
     3421 tcgctgccga gtgcggccag aaggtgttcc gccaattccg cctggttacc gaagatagca
     3481 acgaccgggt tcatatctgt cttcctggtg acggagcgcg atagcgtcgg gaccggcagg
     3541 actgtaaaat agtatttcga ggtaacgaaa ccgaagcacg cgttgccagc aggtgcttca
     3601 ccatccttgc cgatcagttc gctgcggcga cggcctcgtt gatgcgggcc aggatatcgg
     3661 gggaaatcct catttcctgg gctacttttt cctggtcggc catcatctgc ttgcgcgccg
     3721 cttccagttc cggtttcgga acgaaagaca acttgacgtt cttggcctgg agcgtcttct
     3781 ccgcagtctc ctggtcggtc gccagattcg tccggtagat gccgatgttc gccgcccaca
     3841 gatcggttat cagggtcttc atcgccgggg acagcgtatc ccagaaggca ttgctgatca
     3901 tcgggatgta atcgcccatg ctctgatggt cgatcagccc gtagcgtagt ccggcatccc
     3961 acagcttggc gctggcacag ctttcgttgg tgctttgcag tgcgtcgaac gtgccctgcg
     4021 acagggcaag cggtacatcc ggccatgccg tcatgctggg cacggcgcca aagaaccgcg
     4081 cccgccaggg ctgcgcgaag ccgccggaat tgcggatttt caagcctttc aaatccgcca
     4141 gtgaggtcag tggcttgcgg gtgccatacc agttggtgaa ccccagatcg atccagcgcc
     4201 cggggatctt gacccgcagc ttcttggcga cctgctggtt cacgatatcg ccggggatgc
     4261 cgtcgatggc gcggtgagtg gtctcgatcg gctggccgta gaagatcggc aactgggcga
     4321 aatcggcctc gggcacgtag gacgacacga gccaggtgcc gggtgctgcc atctcgacct
     4381 gcccaagcac cagggccttg atgacgtcgc gatcggcgaa aagctgcccg ctgtcgaaca
     4441 gtctcggtgc gatctcaccc tgcgatgcgg cttccagctt cttcaggaaa tcggcgatcg
     4501 atcgggtgcg gccatgcgtg ggggtcgtat cgaccgagac gcgcatctgg atcggattcg
     4561 cccgcgccgt ccggatgaag ggcgcggcaa gtgccgaacc cagaaggatc cggcgcccaa
     4621 ccgcggcgct catgcccgat tgatcgaagc gggagcagtg aggtcgcgcg cgttgatcga
     4681 ctggatcgcc gatagccgct tgaacaatat atcggctggg atcggcgaat cccccgcatc
     4741 gaggcagtcg gcgaatttct cgaagatctg ctggtcggtc agcggtcgtg tcggatggcc
     4801 agtggcccgg gcgaccgggt ccccttccaa ccggcggccg ccggccaggg tgacggtcac
     4861 ctggtcgtgc ggtgccgcac cgggcagttc tggatcgtag gtggaggtcg tgacgatctc
     4921 caccttcttc atcagtgcct ggatgtcggg gcgctggacg aaatcgtcgg tcagttcgcg
     4981 caatccgacg cgttgggcga cgatgccgct ggccatgcag aactcaatgc tgaacttcgc
     5041 cgccaggccg gtgtcgggct ggtggttgcg cagcacggtg gagaaataat cgctgatgtt
     5101 gacggtgatt ttctcgacgt cgtcgaccct gatcggactg gccttgacca ggtccagcat
     5161 gcagtcgatg gcacggtggg tacagtagca ggtggggtat ttcttgatcc ccagtccctg
     5221 ggtgaggatc gcccattccg tcccggcctt gctctcgctg acgcggtcct cggtcccggt
     5281 gggggagatc gcgtgcagga agccctgggg gtgctccagc gcgtcggtgt tggcggtgaa
     5341 accggcttcc gccagacgcg ccgccatgat ccccgcatgg gccgccttac cggcgtggaa
     5401 tggcttggtc atggtgccga agttcgacat caggccggcc gactgtgacg cgcccagggc
     5461 gatggcgatg gccgatttct cggcgtcgag cttccgcagc ttggcgcagg ccgcggcggc
     5521 accgaccgcg ccgtaaaggc ctgtggggtg ccagcccttc tggtgcagca aaccggtgtc
     5581 gcgccggaac agctccgccc aggtctcata tcccgcgacg taggcggtga tcatgtcggc
     5641 gccagaggag ccgaggtgtt cggcctccgc caggatcgcc ggcaccagga cggtgctggg
     5701 atggccgcgc agggcgacgt cgtcgtagtc cagcgcatgt gcggcggtgc cgttgatcca
     5761 tgcggcgtcg ggggcagggg ccttgcggtc gccgaacgtc agggtggcgg gcccgtcgcc
     5821 gggggcgagg gtttcggtca tgatgcggac gctgtcttca ttgcggccgg cgatcatggt
     5881 gccgatggtg tcgatgaacc ccatgcgggc gatccgagca gcttcctccg gcaggcgatt
     5941 tggtgacaaa tcggcgacga attggcccag cgatctggtc agcggcgatg atgtcaacgt
     6001 cattggacgg ttcctccgtg tgcggacggc agcttgggcg cccgatattc ccccgatccg
     6061 ccggaacgtc aaccgccgcg gcgaacccgc ttgccgctgc ctcgcattca cctcaaggtg
     6121 acatgagcat tgcgaaaaat gccgccggac ccatctggat caagggaaat cgtgcggccg
     6181 gagaaatccc gcgggaccct gtgaagaaga acggccatca caaaagatcg aaacgggagg
     6241 ttttatgctt cgacgttcat tggctcttgc cggctttgct gtactgttgg ccgggaccgc
     6301 ctcggcggcg accgagaaat tcagcgcgac gctgacgccc gcggcggagg ttccccctac
     6361 caagtccacc ggctcaggga tggcgacggt ttcgctcgac accacgacgc atgaaatcac
     6421 ctacaacgtg actttcagcg ggttctccag cgcggtggcc gcggcccaca tccacgggcc
     6481 agccgcagcg ggcaagaacg cgggtgtcgt tgtgccgctg ggcaacaagc ccaccagtcc
     6541 gatccacggc accgccaagc tgaccgcgga acagcagaag gagctggtgg cgggccagta
     6601 ttatgtgaac gtgcatacga agaacaaccc tggcggggcc attcgtggcc agttggccgc
     6661 agcgcagtag cgtcgggcgc ccgtgccccc tgtcgcaaga ggggcacggg cgtcgcctgt
     6721 cggcgtgacg aggcttcagc ccttcgactt cgagcgctgg atggcgtcga cgatcagcgc
     6781 cttcgcctcg gcggcgtcac cccagccgtc gaccttgacc catttgcccg gctccagatc
     6841 cttgtagtgc tcgaaaaagt gctggatctg ctccagcgtg atcgccggca gatccgtgta
     6901 gttgtacacg ttcgtgtaac gttgggtgag cttcggcgat ggcacggcga tgattttctc
     6961 atctccgccg ctctcgtccg tcattttcag cacgccgacg gggcggcaat tgatcaccgc
     7021 gcccggcacg atcgggcggg tgttcgccac cagcacgtcg atcgggtcgc cgtcatcgga
     7081 caatgtgtgc ggcacgaagc cgtagtttcc gggataccgc atcggtgtgt agaggaagcg
     7141 atccaccacc agcgtgccgg cttccttgtc catctcgtat ttgatcggtt cgccgccgat
     7201 ggcgacttcg atgatcacgt tgacgtcgtc cggcgggttc ttgccgatgg cgatggcatc
     7261 gatgcgcatg cgtgttctct ccttcgatcg cgtcgccggc ccggcgggca ggcgacgggg
     7321 attcggtcag gcgcacgtcc cggcgacgcc acgccacaca gatagcagat atacgggccg
     7381 caatcagcct tggctgaagt gccagcccat cgcgtcgagg cgctgacgcg aggcgatcag
     7441 gtcaggcagc gtgtcttggc tgattgcctc gatcaccacg ccgtgtgtgt aaccgacatc
     7501 cgtcagggca ccgcggatcg cgccgaagtc gataacgccg gtgccgatgg gatcgtggcg
     7561 ccactggccc ggcggcgcgt ccgacaaatg gaccaggctt atgcgctcgg ccagcgtgcg
     7621 aatgccgtcg gccgggtctt cgccgatcgc ggccgcattc gtcacgtcgt agagcacatc
     7681 gacattgccg tagtcttcgt ggtcgaggaa cgccttggcc gccggtgcct cagccagcag
     7741 catgccggga atattctcca gcagcaggcg gacaccgcgc ggttgcgcgg ccctgacaag
     7801 gcgttccagc gcgccgcgat aaatgcccag cagccggtca tcgggcggcg gcagcagtcc
     7861 atgcttccgc cctgaattga tcgtcagcca gcgcgcgcca aggtccgacg ccagatcgag
     7921 cgccttgaga taggccgaga cggagaaatc cacgaccgcc ccgttcacgc tcgccaaatt
     7981 ggtctcgctg ctgggtagat cgactgcgag gatcgagccg ccgatgcggt cgacggcgcg
     8041 gcgcgtggcg gtcagcaccg cccggtcggc gctccagggg tcaaggtggg gtgaaccggc
     8101 cagatactgg aagtgacgga agccttccgc cgccagatct tcggtcgcct gcgccgcatc
     8161 acggtcccaa atgaagccga aggtgtgaac gcctagaaat tccatctggt cccttatcgt
     8221 ctgtcgcggt ctgtctttcg cccgaaggcg gcggcagttc aagctcgatg aacaaagcag
     8281 caagcggtat tgtcgcagcg cctccgcccg tccatgtcga tatcgttgac gcagcgttcg
     8341 ggcggaacgg atgtgtggtg ccggacgatc atggcagcat ttcccccagc cgcgccgcga
     8401 ccacggacaa aacgctggcc cagtcgccgc gttccggctg acgcagcagc cgcatcgagg
     8461 ggtaccacgg ggtgtcgtcg cgttccatca tccagcgcca gtccgccagg tttgccagca
     8521 acagccagac cggccggtcc agcgcgccgg cgagatgggc gatcgatgta tcgacggata
     8581 tcaccacgtc catcagcgaa accagcgcac cggcgtcgcc gaaatcctgt ggaacgtccg
     8641 cgtggttccg cacccatggt cggtcctgca gccccgcccg gtccgccggg cgaagcccgg
     8701 tttgcaggac gtgcaactcg atgtccggcc gatcggtcag cagtgtcgca aacacgtcga
     8761 acgggatgct gcggcgggca tcgtcacgat gcttcggatt gcccgaccag gcgaccccca
     8821 cgcgcaaggc tcgccgcgga cccagtttgt gccgccaatg tgccattcgg gcctcgggga
     8881 cggtcagata ggggacagcg gccggaatgc tgtcgagatc ggtgccgaat acccgcggca
     8941 ggcttagcag cgagcaatgc acgtcgaacc gcggtggtgc tgtcgcggta tcgatcagcg
     9001 tggccacgcc gggcagtttc gtcagcagcg gaacgatctc ggcgtaggcc tgcaatatca
     9061 cccgcccgcc gcgcgcggcc accaggggcg cataacgggc gaactgcaat gcatcgccca
     9121 gaccctgttc ggcgtgcaac aggatggtgc gcccacccag cttctcgcct tcccagttcg
     9181 gctgggcgaa tgaacgccac agatgccgat tggctcgggt gcgaaacctg gcttcgtatt
     9241 tgcgccagcc ctcgtggaac cggccgtagc gcagcagcca catggcgtcg gtctcctgcg
     9301 cttccggcag gtcgggacgc agggtgaggg atcggcgcaa gcaggcgagg gcctcggcgt
     9361 cgcgccccag gacgaacagg gtggcggcga gatcgttgaa tgcttcggcg cgcgtcgggt
     9421 cgatgcgggt ggcggtggtc agggcgaccg cggcttcggt gcagtctccc gtcaggaact
     9481 ggcaattgcc cagggcgtag aggaagaaag gat
//
LOCUS       DATAVD010000292         8171 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_400381, whole genome shotgun sequence.
ACCESSION   DATAVD010000292 DATAVD010000000
VERSION     DATAVD010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8171
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400381"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..129
                     /locus_tag="VHX39_05315"
                     /pseudo
     CDS             1..129
                     /locus_tag="VHX39_05315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611167.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            228..1021
                     /locus_tag="VHX39_05320"
                     /pseudo
     CDS             228..1021
                     /locus_tag="VHX39_05320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611116.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            1134..1565
                     /locus_tag="VHX39_05325"
     CDS             1134..1565
                     /locus_tag="VHX39_05325"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX3990576.1"
                     /translation="MSSHKSARIAPLELITRGERRRRWTVEQKQMIAAESLTPGASAT
                     DVARLHGIGTGQLYNWRKALLAAQPSAAVPGSFACVEVVTAKPLLCTARDSVSPVSTP
                     LPKPVQPASLIEIVLPDGTMLRVDAQVDPRALRRILAALRG"
     gene            1562..1909
                     /gene="tnpB"
                     /locus_tag="VHX39_05330"
     CDS             1562..1909
                     /gene="tnpB"
                     /locus_tag="VHX39_05330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017183759.1"
                     /note="TnpB, as the term is used for proteins encoded by
                     IS66 family insertion elements, is considered an accessory
                     protein, since TnpC, encoded by a neighboring gene, is a
                     DDE family transposase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HEX3990577.1"
                     /translation="MITLPSGVRVWLACGYTDMRKGMDGLAMLAQQALTEDPFGGALF
                     AFRGKRGGLVKLLWFDGQGMCLFSKRLEQGHFVWPSTQTGRVSLTPAQLSILLEGIDW
                     RMPVRVRRPELAG"
     gene            1973..3526
                     /locus_tag="VHX39_05335"
     CDS             1973..3526
                     /locus_tag="VHX39_05335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012169816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HEX3990578.1"
                     /translation="MFEAPTDLPEDPAALQAILRAALAEIERLQFQLAGLQRNRFGRR
                     SEKLADETVQQASEDLEQSVAEKMAGLEAATQAKTGPSAGKPPKRNRGALAAHLPRVE
                     VIVDVQDKACACCGGSLHQIGEDQAEMLDYVPAQFRVRLIRRPRYGCRACENAVAQAP
                     APDRPIDGGMATEALIAQVLIGKYGDHLPLYCQSQIFARQGIELDRSTLCNWVGRACW
                     WLAPLHDLMLSTVLSSPKVFADDTTLPVLDPGNGCTKTGRLWCYAVDNRPWQGPGHPI
                     AAYAYSEDRKAEHPASHLKGFRGLLQVDGYAGFGSLMKAATDGGLQLAFCWAHTRRKF
                     YDIHVATKSPLAEQALRRIAELYAIEADIHGRTADKRRAIRQERSRPLVEAMHAWLTE
                     TLGRISGRSELAKAIRYALNHWSGLALFLDDGRLELDTNTVERAMRPVALGRKNALFA
                     GADSGGEHWALVATLIQTAKLNKLDPLAWLTDVLERIVSGQTKRNQLHMLLPWYWTSA
                     KQPSVISSA"
     gene            3585..3965
                     /locus_tag="VHX39_05340"
     CDS             3585..3965
                     /locus_tag="VHX39_05340"
                     /inference="COORDINATES: protein motif:HMM:NF024408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX3990579.1"
                     /translation="MQFQLAGLQRNRFGRRSEKLADEAVQQATEDLEQSVAEKMAWLE
                     AATKAETGSSAGKAPERNRGALPTHLPRVDVIVDVQGCPSHGEPSLTLCPNFRDHLKR
                     PHSSLDARTPDQAYFNHLPLAAAA"
     gene            4116..4850
                     /locus_tag="VHX39_05345"
                     /pseudo
     CDS             4116..4850
                     /locus_tag="VHX39_05345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611883.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            complement(4847..6028)
                     /locus_tag="VHX39_05350"
     CDS             complement(4847..6028)
                     /locus_tag="VHX39_05350"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX3990580.1"
                     /translation="MSSTPTLTITASKARTVRFEALDGLRGIAALVVVLSHCTLLYET
                     LWNTIYLHDKTQGLLDPVFWITRTPLSMFVSGTQAVYIFFVLSGFVLTLTFTKGDGNN
                     ILPYLCKRIPRLWLPMAFAVSLSAIIFTFVHRPPLAMGQSDWCGYCYVVHPFSLVFQQ
                     LSLTDASSPMNALDPPTWSLVHEMRISIVLPAIIFALIRWRSLALAASSLLSLAAVMI
                     MHRIQNPLILNLVDILQYICLFAIGAAIYLSLQKVRSFLIRLPKFAVPAGWCISIILF
                     ILTYRQDVFLLHAQWKIVASIAATIMMIVAVDSRRNVVLMSRPVLWLGKVSYSLYLVH
                     TSILLSTLYICGGRLPLLIPIAITIPVSLLAAEGMNRWIERPSQSIGRQLAAKAVSIW
                     H"
     gene            6403..7587
                     /locus_tag="VHX39_05355"
     CDS             6403..7587
                     /locus_tag="VHX39_05355"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3990581.1"
                     /translation="MIENSVPYVVLQSLNDILISVVVPVFDEEAVIGLFHARLASVME
                     QIGVPWEVIYVNDGSRDRSLPILLGLSTHDPHIAVLNFSRNFGKEIAMTAGFDHAEGD
                     AVIVIDADLQDPPELIPALVAAWREGFDVVYAQRRGREGETWLKKATAACFYRVMQGI
                     GGTARLPLNTGDFRLMSRRACQALLQLREQHRFMKGLFAWVGFPSKAVQYDRAARAAG
                     GTKWNYWKLWNLSLEGITSFTVAPLKVATYVGLLTAFVAVLYGGLIIVRTLLFGNPVP
                     GYPSLLVVVLFLGGGQLVTLGIIGEYLGRVFNETKGRPLYIVERFLKSEASACPVQQG
                     RQTASEGLAHWLDPSVGPATATQLDRRLHEPLQSAGGHTGNRKRRRPDHDNVAASPEM
                     RF"
     gene            7584..>8171
                     /locus_tag="VHX39_05360"
     CDS             7584..>8171
                     /locus_tag="VHX39_05360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990582.1"
                     /translation="MNQMSPAAHAATLDQLDQRTTHTRKSRLAWALLRVPVLLVLAFL
                     FRDLILSIDLAQITVFVIGIASTPAAHALIFLIAAATLAVISLTTRRFGPTYGYAAVV
                     IIAAPLALVAFHLLGTQRRLALLVVALLVTNLMPDAFFARLFATRRLRDGFMALGVGV
                     AELFFFRRYLVWAFQARLGSRIAQANTVMAMLPAII"
BASE COUNT         1686 a         2427 c         2480 g         1578 t
ORIGIN      
        1 atttggtagc cgaggcagac aacgaatacg cgatgatcga tggcaccatt gtgcgtgccc
       61 atcggcacag tgccggcgtg aaaaaaagcc ggcgacgacc aagcgattgg gcggtcacgt
      121 ggcggactga taccaaccga ctcatgagtt gactctaccg tgatttcgtc cggctcggga
      181 ctacgtaatt gatcttttgc cgatcctgga tgaggggtgg gacggcgatg acggtgcgga
      241 tcacacggct cgaacacgat gccaacgccc tgcgtcagca cgcggcgcgc acttccgcag
      301 ccgctattgc acggcggctt ctggcgttag tcttggtttt ggaaggacat ggccaggccg
      361 acgcggccaa gagctgcggc atggatcggt aaacgctgcg tgactgggtc attcgttaca
      421 acgagcatgg catagctggc ctgtcggacc ttccaaagcg cggcggcgcg gccccaaaac
      481 tgtccgttga agagaaggcc gtgctgacag agtgggttca acaaggcccg gatctcgcgg
      541 aagatggggt cgtgcgctgg cggttatgcg atctgcggga ttggatattg gcgagcttct
      601 tcgtggtgat gaacgaacgc agtgtcgggc ggatcctgaa gacgttgacc ttcagccaca
      661 tctcggtgcg cccacgccat ccgcaggccg atgccgatgc ccaggagacg cacaaaaaaa
      721 ctttgccgcg ctcgtcgccg ccgccattcc cgatgccgca caaggccagc cgatcgagtt
      781 atggtggcag gatgaggccc gcatcggcca gcaaggcagc ctgacccgca tctgggcgag
      841 gctgacccaa ggttccgtcg ggcgaagtcc gatggaatgg tcagacgagg ggcagcgcgg
      901 cagccgaccc acagcgccac gcgatcagcg ctatcagtcg gcctatctgt tcggcgcggt
      961 ctgtccagac tgcggtgtgg gcgccgggct cgttttaccg cgcgccaatg ttcatgcgat
     1021 gtaagcgtcg cgtccggacc acatggcatt ggcgggcaag actatgatcg acttgcttca
     1081 tggagaggga agcgaaccca gccgaggatg ctgatcaaat agagagcgct catatgagca
     1141 gtcataagag cgctcgcatt gcaccgcttg agttgatcac ccgcggcgag cgacgccggc
     1201 ggtggacggt cgagcagaag cagatgattg cggcagaaag cctgacgcct ggtgcatccg
     1261 cgacggacgt ggcccgtctg cacggcatcg gcacgggcca actgtataat tggcgaaagg
     1321 cgttgctggc ggcgcagcca agtgcggcgg tacctggcag ctttgcctgt gttgaggtgg
     1381 tgactgccaa accgctgctg tgcactgcac gggacagcgt gagcccggtg tccacgccgc
     1441 tgcccaaacc ggtccaaccg gcaagcctga tcgagattgt cttgccagac ggcacgatgc
     1501 tgcgtgtgga tgcgcaagtt gacccgcgtg ccttgcgtcg cattctggcg gcgctgcgtg
     1561 gatgattact ctaccatccg gcgtgcgagt gtggctggcc tgcggttata ccgatatgcg
     1621 caaaggcatg gacgggctgg cgatgctggc tcagcaggca ctgacagaag atccatttgg
     1681 cggcgccttg tttgccttcc gcggcaagcg cggcggcctg gtcaaactgc tttggttcga
     1741 cggccagggc atgtgtctgt tcagcaaaag actggagcag ggtcacttcg tctggccgtc
     1801 cacccagact ggccgggtgt cgctgacccc ggcgcaactg tcgatactgc tggaaggcat
     1861 cgactggcgc atgcccgtcc gcgtccgccg tccggaactg gcgggctgat gcaccagcgg
     1921 ctcacgccag attcattgga cccgattcgc aacgacgcta cagcctgctg gtgtgttcga
     1981 agcacccaca gacctgcccg aggatcccgc cgcactgcaa gcgatcctgc gcgcggcgct
     2041 ggccgagatc gagcggctgc agtttcaact tgctggcctg cagcgcaatc gcttcggccg
     2101 gcgatcggag aagctggccg acgaaacggt gcagcaggcg agcgaggacc tggaacagtc
     2161 tgtggccgag aagatggccg ggctggaggc ggcgacccag gcgaagaccg ggccgtccgc
     2221 cggcaagccg cccaagcgca accgcggtgc cttggccgcc catctgccgc gggtcgaggt
     2281 catcgtcgac gtccaagaca aagcctgcgc ctgctgcggc ggttcgctgc accagattgg
     2341 cgaagaccag gctgagatgc tggattacgt ccccgctcag tttcgggttc ggttgatccg
     2401 ccggccgcgg tatggctgcc gcgcctgcga aaatgctgtc gcccaagccc cggcgccgga
     2461 ccgtccaatc gacggtggca tggcgacaga agccctgata gcgcaggtgc tgatcggcaa
     2521 gtacggcgac catcttccac tgtattgcca gtcgcagatc tttgctcgtc agggcatcga
     2581 gctggatcgt tccacattat gcaactgggt aggtcgtgcc tgctggtggc tcgccccact
     2641 gcacgacttg atgctgagca cggttctgtc ctcgcccaaa gtgtttgctg acgacacgac
     2701 cctgccggtg ctcgatcccg gcaatggctg caccaaaacc ggacggttgt ggtgctacgc
     2761 ggtcgacaat cggccatggc agggtccggg tcacccgatt gctgcctacg cttacagcga
     2821 ggatcgcaag gcggaacatc cggctagcca tctgaagggc ttccgcggac tgcttcaggt
     2881 cgacggctat gccgggtttg gcagtctgat gaaggcagcg acggatggcg gtttgcaatt
     2941 ggcgttctgc tgggcgcaca cgcggcgcaa gttctacgac atccacgtcg caacgaagtc
     3001 gccgcttgcc gagcaagccc tgcggcggat cgccgagctg tatgcgatcg aagccgacat
     3061 tcacggtagg accgccgaca agcgccgcgc catccgccaa gagcgcagcc gcccgctggt
     3121 ggaggcgatg catgcttggc tgaccgagac attgggccgt atctcaggcc gatcagagct
     3181 ggccaaggcc atccgctatg cactcaatca ctggagcggg ttagccctgt tcctggacga
     3241 cggccgcctg gagctggata ccaacactgt cgagcgcgcc atgcgcccgg tagctcttgg
     3301 acggaaaaac gcgttgttcg ccggcgccga cagcggcggc gaacattggg cactggtcgc
     3361 aacgctgatc cagacggcta agctgaacaa actcgatccg ctggcgtggt tgaccgatgt
     3421 cctcgaacgc atcgtgtcgg gacaaactaa acggaaccaa ttgcacatgc tactgccgtg
     3481 gtactggacg tccgcaaagc agccgtcggt gatcagttcg gcttagccgt caaacgccct
     3541 gtggtgctgg cgcgacgctt accccgctgg ccgagatcga gcggctgcag tttcaacttg
     3601 ccggcctgca gcgcaatcgc ttcggccggc gatcggagaa gttggccgac gaggcggtac
     3661 agcaggcgac cgaggatctc gaacagtccg tggccgagaa gatggcctgg ctggaggcgg
     3721 cgaccaaggc ggagaccggg tcgtccgccg gcaaggcgcc cgagcgcaac cgcggtgcct
     3781 tgcccaccca tttgccgcgg gtcgacgtca ttgtcgacgt ccaaggctgt ccttctcacg
     3841 gcgaaccgag cttaaccctc tgtccgaatt tccgggacca cctcaaacgt ccgcattcga
     3901 gccttgacgc ccggacaccg gatcaagctt acttcaatca cctgccgctc gctgcggcgg
     3961 catgaatttc gccgccgttg ccgggttgtc gttccggtgg ggctacgccc tccctccacg
     4021 acaccccggc aacggcatcg taacatcaac cggcaggtac tccacttatc gaagacgtaa
     4081 cgctgtccag agaaacccga ccacctctat cgggcgcgat ggcccaccac attggcctca
     4141 gcgtcagttc ggtgcagctt atatggcgca aacacggtct gcagccgcac cgcacaggcc
     4201 tgttcaagct gtccaacgac ccacaattcg ccgagaaggt catcgacatc gttgggcttt
     4261 acgtcgctcc gcctgagcat gccgtggtcc tgtcgatcga cgaaaagagc caaattcaag
     4321 cacttgaccg gacccaaccg ggccttccta tgaagaaggg ccgctgcggc accatgacgc
     4381 acgaccacaa gcggaacgac accaccacgt tgttcgctgc cctgaacgtg ttggacggca
     4441 ctgtgatcgg gcgctgcatg cagcgtcacc ggcatgagga gtttatccgc tttctgaatg
     4501 tcaccgaggc tgccgttccc aagggcaagg ccatccacgc catcgtcgac aactacgtca
     4561 cccacaagca tccgaaggtc aaggaatggc tggaacgcca tccgcgatgg acgttccact
     4621 tcactcccac atccgcgtgg ctgaatgccg tcgaagggta ttttgccaag ctcaccaagc
     4681 ggagactgca gcggggtgtg ttctgctcgg tcgtggaact ccaggtcgcc atcaagcggt
     4741 tcctcgccga gaccaacacc gatccacagt cattccggtg aacaaacgac actgccaaga
     4801 tcatcgccgc cgtcaaaaga ggacgccacg tgttaaattc tatccactag tgccatatcg
     4861 atacggcctt ggcggccaac tggcgcccaa tagactgcga tggccgctca atccacctgt
     4921 tcatgccttc ggcagcaagc agggacacgg gtatcgtaat ggctatcggt atgagcagcg
     4981 gtagcctccc gccacagatg tagagcgtcg acagaagaat cgacgtgtgg acaaggtaca
     5041 ggctgtagga gactttgccg agccacagga cgggacgaga catgaggacc acatttctcc
     5101 tggagtccac agctactatc atcatgattg tcgcagcgat agacgccacg atcttccatt
     5161 gcgcgtgtag cagaaacacg tcctgccggt aggtgagaat gaacaagatg atgctgatgc
     5221 accagccagc gggcacggca aatttcggaa ggcggatcag aaaactccga actttctgaa
     5281 gggagagata gatggcagcg ccgatagcaa aaagacaaat gtattgaagg atatcaacca
     5341 ggtttaatat gagtggattt tgaattctgt gcatgatcat cacagcggcc aagcttagaa
     5401 gcgatgaagc ggctagggct aaggaacgcc accttatcag ggcgaagatg atggccggca
     5461 atacgatgga aatccgcatc tcatggacca ggctccacgt cggcgggtca agggcgttca
     5521 tcggagacga tgcatccgtc agactcagct gctgaaagac gagggaaaag ggatggacca
     5581 catagcagta tccgcaccag tcgctctggc ccattgccaa tggcggccga tgaacaaacg
     5641 taaagattat cgcggacaag ctcactgcaa aagccatcgg aagccaaagg cgtggaatcc
     5701 ttttgcagag atatggtaaa atattgtttc catcaccctt agtaaaagtg agggtaagca
     5761 caaatccgct caacacaaag aatatgtaca ccgcctgtgt acccgaaacg aacatactca
     5821 gtggcgttcg agtgatccaa aaaactggat caagaagccc ttgcgtcttg tcgtggaggt
     5881 aaatcgtgtt ccacagcgtt tcgtagagca gcgtgcagtg cgatagcaca accaccagag
     5941 cagcaatgcc acgcaatccg tccagggcct cgaaccgtac agtccgggct tttgacgccg
     6001 tgatggtcag tgtaggcgtg gaactcatca aggcccccga aaatgggttt gtgacgcgtg
     6061 cggtaccatt gctccagcga tggtgcgtcg tagggcttgg tcagccgact taaagggccg
     6121 cctgtgacga acacggccaa ccccaagtcg ccgacttgcc tagcaccagg ggctcaccgc
     6181 acgtccgcca agctgttgcg actgaaagcg ttgccgggcc cgcattgtac aatcccacgc
     6241 accagtttca aaggacgcct tggtcctcaa aggtactatt cggctgcatc cttatggctg
     6301 ataccgatcc gttccgtagt caaggtagag ttcaaccaga taatgaaaga tccgcaaagc
     6361 gggcccggtg catgtgcaat gataaaaacc gcggattaga aaatgatcga aaactccgtc
     6421 ccttacgtag tgctacagag cctcaatgat atactcatct cggtcgtagt acccgtcttc
     6481 gacgaagagg cagtcatcgg gctgtttcac gcccgtctcg cgtccgtcat ggagcaaatc
     6541 ggcgtgccat gggaagtgat ctacgtgaat gatggatcgc gtgatcgcag cctcccgatt
     6601 ctgctcgggc tgagcaccca tgatccgcac atcgccgttc ttaatttctc acgcaatttt
     6661 ggcaaagaga ttgcgatgac cgcgggtttt gatcacgcgg agggagacgc ggttatcgtc
     6721 attgatgccg atctacaaga tccgccagag cttattccgg cgctcgtcgc ggcctggcgc
     6781 gagggattcg acgtcgtcta cgcgcaacgt cgggggcgcg agggtgagac gtggctcaag
     6841 aaggcgaccg ctgcctgctt ctatcgcgtc atgcagggta tcggcggcac cgcccgactg
     6901 ccgctgaaca cgggcgactt ccggttgatg agccgacgtg catgtcaggc cctgctacaa
     6961 ctgcgtgagc agcaccgctt catgaagggt cttttcgcct gggtcggctt tcccagcaag
     7021 gccgttcaat acgaccgcgc tgcacgtgcc gccggcggca ccaaatggaa ctactggaag
     7081 ctgtggaacc tgtcgctcga gggcatcacg agcttcaccg tagcgccact gaaggtcgca
     7141 acatacgtcg gactgctcac ggcgttcgtg gcggttctgt acggtgggct gatcatcgtg
     7201 agaaccttgt tgttcggcaa tcctgtacca ggctacccga gccttctcgt tgtcgttctt
     7261 ttcctgggag gcggccagct cgtgacgttg ggcatcattg gtgagtatct cgggcgggtt
     7321 ttcaacgaaa cgaaaggccg gccgctatac atcgtcgagc gctttctgaa gagcgaagct
     7381 tcggcctgcc ctgttcaaca gggcaggcag acggcgagtg aggggttagc ccattggctt
     7441 gacccgagtg tggggccggc gactgcgact cagctagacc gcaggttgca cgagccactc
     7501 caaagcgccg gcgggcacac aggcaaccga aagcgtcgca gaccagatca tgacaacgtg
     7561 gcggcctcgc cggagatgag attttgaacc agatgtcccc tgcggctcat gccgcgactc
     7621 tagaccaact agatcagcgg acaacgcata ccagaaagtc ccggctcgcc tgggctcttc
     7681 tgcgtgtgcc ggtgctcctc gttctagctt tcctgttcag ggatttgatc ttatcgattg
     7741 atctcgcgca gattacggtc ttcgtcatcg gaatcgcaag cacacctgct gcccatgcct
     7801 tgatttttct gatcgcggcc gcaacgctcg cggtcatctc tctgaccact cgacgcttcg
     7861 gccccaccta tggttacgct gccgtcgtaa ttatcgccgc gccgctcgca ctggttgcat
     7921 tccacctgct cgggacacag agacggctgg cccttttggt tgtggccctc ctcgtgacga
     7981 acctgatgcc ggacgcgttc ttcgcgcggc tgttcgcgac acggcggttg cgtgacggtt
     8041 tcatggcact tggcgttggt gtcgccgaac tttttttctt tcgccgttat ctggtttggg
     8101 ccttccaggc gaggctgggc agccggattg cgcaagccaa caccgtcatg gcgatgctgc
     8161 ctgcgatcat t
//
LOCUS       DATAVD010000293         1690 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1517226, whole genome shotgun sequence.
ACCESSION   DATAVD010000293 DATAVD010000000
VERSION     DATAVD010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1517226"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..405)
                     /locus_tag="VHX39_05365"
     CDS             complement(<1..405)
                     /locus_tag="VHX39_05365"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990583.1"
                     /translation="MLTWLRDLTPRERRTMTACWAGWTLDGFDQQLYSYVVPTMIGLW
                     GLTPGSAGTIGTVTLLTSSLGGWFAGALADRFGRVRVLQFAILWYSLFTFLCAFAQNF
                     EQLFILRALHGIGFGGEWAAGSVLMGEVIRDKY"
     gene            complement(547..>1690)
                     /locus_tag="VHX39_05370"
     CDS             complement(547..>1690)
                     /locus_tag="VHX39_05370"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990584.1"
                     /translation="KVFILTVLNFSIASGLLYFTPDNGWIYLSVMRFFVGFGVGGLYC
                     VDLPLVQEFVPARMRGFIGGLVTVFIPLGVMIASSFAAFFTNTIGWRGLFLIGLLPAA
                     FTLVIRGWVPESPHWLMSQGRSEEARRSIAWALQVAPETLPLTNEVPMQEHAAWSDLF
                     KYPRSLAVSWMASIGAQTAGYGIILWAPTLFVLQLGVTPAQAAGLFVWVSAAGIAGRV
                     AFSVLSELIGRRPAGIILGFGGMICIITAGLGHNVMFGSVSLFWLMIVCADFFYDGGF
                     AVIGPYMAEVWPTRLRTTGMGSAYGFGGLGKIIGPLGLALMIGASDVIKPQATIAAIV
                     PGFMYFAAWMALCGCAFLFFGFETGRQSLTEIDASLQANPREQEAD"
BASE COUNT          411 a          538 c          473 g          268 t
ORIGIN      
        1 gtatttatcg cgaatgacct cacccatcag caccgacccg gccgcccact cgccgccaaa
       61 accgatccca tgcagggccc gcaggatgaa cagctgctcg aaattctgtg cgaaggcaca
      121 caggaacgta aacagcgagt accacaagat tgcgaattgc aaaacgcgca cacgaccgaa
      181 acgatccgcg agcgcgccgg caaaccagcc accaagcgac gacgtcagca atgtcaccgt
      241 gccgatcgtc cccgccgagc cgggggtcaa tccccacagt ccgatcatcg ttgggacgac
      301 gtaactgtaa agttgctggt caaatccgtc caacgtccac ccggcccaac aggccgtcat
      361 cgtccggcgt tccctgggcg tcaggtcgcg aagccacgtc agcattacgt ttcctcctca
      421 gaacgcaacc gccgtgttga ccacggtcgg ccgcctcgaa ctgcctcggg atctgtccca
      481 ggcaatatga ttgcggtcag gctgcgacgg tttcgtcaac ctgacctttt gttgtggctt
      541 ccatgctcaa tccgcttcct gctcgcgcgg gtttgcctgc aaggaggcgt cgatctcggt
      601 cagcgattgc cgtccggtct cgaacccaaa gaacaggaag gcgcatccgc acaacgccat
      661 ccatgccgcg aaatacatga acccgggcac gatcgcagcg attgtcgcct gcggcttgat
      721 cacgtcggag gcgccaatca tcagcgcaag accgagtggg ccgatgatct tgcccagtcc
      781 gccgaacccg tacgcggagc ccatgccggt ggtgcgcaag cgggttggcc agacctcggc
      841 catgtaaggg ccgatcaccg cgaaaccgcc atcgtaaaag aaatcagcgc agacgatcat
      901 cagccagaac agcgacactg acccgaacat cacgttgtgc ccgagacctg cggtgatgat
      961 gcaaatcatg ccgccaaatc caaggatgat accagccggc cgccggccga tcagttccga
     1021 aagcaccgag aaggccacac gaccggcaat gccggcagcc gatacccaaa cgaacagacc
     1081 ggcagcctga gcgggcgtga cgccgagttg tagaacgaac agtgtcggtg cccacagaat
     1141 gataccgtaa cccgcggttt gcgcaccgat actcgccatc caggagactg ccaaactgcg
     1201 cgggtactta aacagatcgc tccacgcggc atgttcttgc atcggtacct cattggtcag
     1261 cggcaatgtt tcgggtgcga cctgcaaagc ccatgcgatg gagcggcgag cctcttcgga
     1321 acggccctgg gacatgagcc agtgcggtga ttccgggacc cagcctcgga tgaccagtgt
     1381 gaacgccgcg ggtaacaagc cgatcaggaa cagtccgcgc catccgatcg tgttggtgaa
     1441 gaacgcggcg aaggatgagg cgatcatcac gccaagcgga atgaacacgg tgacgaggcc
     1501 gccgataaat cctcgcatgc gagccggcac gaactcctgc accaacggca ggtcgacgca
     1561 ataaagtccg ccgactccga agccgacaaa gaaacgcatg acggaaagat agatccagcc
     1621 attatccggt gtgaaataca gcaatccgct ggcaatcgag aaattgagca cagtcaggat
     1681 gaacaccttg
//
LOCUS       DATAVD010000294         2660 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3565619, whole genome shotgun sequence.
ACCESSION   DATAVD010000294 DATAVD010000000
VERSION     DATAVD010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2660
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3565619"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..613
                     /locus_tag="VHX39_05375"
     CDS             <1..613
                     /locus_tag="VHX39_05375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990585.1"
                     /translation="SELHIFVRPEINSLSDLKGKKVNFNTPGTAAAYSGPLIFDQLKL
                     DVQKTFIPHQVAIEQMKAGTDDMAAVVFITSKPIDAFRNGNFPPGFKFLPVSFQDYKF
                     YLPSTLTNRDYPKLIPEGQQIETIAVPTILASYNWPKNSDRFRRVARLTNYLFDRMSK
                     LQQPGFHPAWKDVNLKAPVPGLTRFSVAQDWLDQHAPKTPPAH"
     gene            726..1211
                     /locus_tag="VHX39_05380"
     CDS             726..1211
                     /locus_tag="VHX39_05380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990586.1"
                     /translation="MQWIKGAVIGGTTLALIAAAALPCVAQPKQQSAMTQSQKAKVHR
                     VIVQVTQNDPAVMNMALNNVENLVSYFHDKGEKVEIEVVAYGSGLTMMRSDTSPVKDR
                     LAALGGNKSITFSGCGNTLAKQSASESKQISLVPEAHIVSAGIARVVELQEEGWTYVR
                     P"
     gene            1650..>2660
                     /locus_tag="VHX39_05385"
     CDS             1650..>2660
                     /locus_tag="VHX39_05385"
                     /inference="COORDINATES: protein motif:HMM:NF024793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3990587.1"
                     /translation="MQDVRLISLTPLAGSRGQIATALARGIGDDDLLIMLSGPEGSGK
                     SAILAAVAATLAYGGMRTIRVSNPDGSTMGQRELAARILGRPTMGSPAQLVAEAITSL
                     IATTDNGQVVLVVDDAHTLTDQAMELLLVISSPVRPGGSGPQLILAGRGAFWDRPWRD
                     ELRSLTDLAEKIELEPLTIEDARDFVMAEAAAAAGTVISVTPDALAALVRCSSGLAAG
                     MNRIVTEAVVLGNHRQITVLTEEIVDAVVTHDTLIEPPCTNADLSTPRDAAVIVPDVA
                     APEPVIQKKPRGRWPAIAATAVIALAGASVGLVPSLRTQVASLFGGSTPEAARGTSPV
                     TDA"
BASE COUNT          538 a          833 c          798 g          491 t
ORIGIN      
        1 atccgagcta cacatcttcg ttcggccgga aatcaattcg ctgagcgatc taaaaggcaa
       61 aaaggtcaat ttcaacacgc ccgggaccgc tgcggcctac tccggaccgc tgatcttcga
      121 tcagttgaag ctcgatgtgc agaagacgtt cattccccat caggtcgcaa ttgagcaaat
      181 gaaggccggc acggacgaca tggcggctgt ggtgttcatc acgtcgaagc cgatcgacgc
      241 gttccgcaat ggcaacttcc cgccgggctt caagttcctg ccggtttcgt tccaggatta
      301 taagttctac ctgccctcga ccctgaccaa ccgggactac ccaaagctga tccccgaagg
      361 ccagcagatc gagaccatcg ccgtgccgac gatcctggca tcctataatt ggccgaaaaa
      421 ttcggaccgg ttcagacgcg tggcccgcct gacgaattat ctgttcgacc gcatgagcaa
      481 gctgcaacaa cccggcttcc acccggcctg gaaagacgtc aacctgaagg caccggtgcc
      541 cggcctgacc cgattcagcg tggcgcagga ttggctcgac cagcatgcgc caaagacgcc
      601 gccagcccat tgagcatcca cccctgggtt ccccgttccc gccacgcctg gatgttacga
      661 aaacaggcca tgtcaaccgg ttcacgatgg tataacgctc gggccagcat ttccggagaa
      721 gtttcatgca atggataaaa ggcgccgtga tcggcggcac gaccctcgcg ctgattgccg
      781 cagccgcact gccttgcgtc gctcaaccca agcagcaatc cgcgatgacg caatcgcaga
      841 aggcaaaggt ccaccgggtg atcgtccagg tgacccaaaa cgacccggcg gtcatgaaca
      901 tggcgctgaa caacgtggag aacctggtca gctacttcca cgacaaaggc gagaaggttg
      961 aaatcgaagt tgtcgcttac ggctctgggc tgacaatgat gcgcagcgac acatcgccgg
     1021 tgaaagaccg gcttgcggcg ctcggtggca acaaaagcat tactttctcg ggatgcggca
     1081 acacattggc caaacagtcc gccagcgaaa gcaaacagat cagcctggtc ccggaagccc
     1141 atatcgtatc ggccggtatt gcccgggtcg tggaacttca ggaagagggc tggacctatg
     1201 tccgaccgtg atcggtcatc tcctgacaca taggggtcgc catcgagcct ccgaggccca
     1261 ggcgcgagtg tggtcgtccg cgcgcgcaat cgctgcaatc acatgtctga tcgcagtggc
     1321 cgtgctggtc cccaatgcaa cggcacaacc gacgacctgc gagacctgcg tcaaagccgc
     1381 cgcctgcgag ccgaaccgcg ccaactgtgt cgccgaatgc cgggcgcggc tgttcagcgt
     1441 cgatcctcga cgcgctggtt gtatcgccgc ttgctccgat gccgccgcgg gttgcacgcg
     1501 aagcgctgtt gaaacctgcc atgggcaaaa aagctgccca taaaggcctg actgccgagc
     1561 ctacggtaca cttttgcctc acacgtgact attttttcgg ctatagtgcg ggcaagttca
     1621 atcaaacata aagggttggg attgtgtcgg tgcaggatgt caggctgatc agccttacac
     1681 cgctggcagg aagtcggggc caaatcgcga ccgcgttggc gcgcgggatc ggcgatgacg
     1741 acctcttgat catgctgagc ggcccagagg gttccggtaa atccgccatt ctggcggcag
     1801 tagccgccac gttggcgtac gggggtatgc gcactatcag ggtcagcaac ccggatggtt
     1861 cgaccatggg ccagcgcgag cttgcggcgc ggattttggg ccggcccacc atgggctcgc
     1921 cagcgcagct cgtcgccgag gcgatcacca gtctgatcgc gaccactgac aatggtcagg
     1981 tcgttttggt cgtcgatgac gcgcacaccc tgaccgatca ggcgatggaa ttgcttctgg
     2041 tgatttcgtc gcccgtgcgt ccgggcgggt caggtccgca actcatcctc gctggcagag
     2101 gggctttttg ggatcgcccc tggcgcgacg aattgcggtc gctcacggac ctcgccgaga
     2161 agatcgagct cgagccgctg acgatcgaag atgcacggga cttcgtcatg gctgaggcgg
     2221 cggcagcggc tggcactgtc atctcggtca cgccagatgc gctggccgcc ctcgtgcgct
     2281 gctcgtctgg ccttgccgca gggatgaacc gcatcgtcac cgaggcggtc gtactgggca
     2341 accaccggca gatcacggtt ctgaccgagg aaatcgtcga tgccgtggtc acgcacgaca
     2401 cgttgattga gccgccatgc accaacgccg acctttcgac gcccagagac gcagctgtca
     2461 tcgtgccgga cgttgcagcg ccagagccgg tcattcagaa gaaacctcgc ggccgttggc
     2521 ccgccatcgc ggcaacggct gtgattgccc tggccggcgc gtcggtcggg ttggttccgt
     2581 cgcttcgcac ccaggttgca tccctgtttg gcggaagtac accggaggct gcgcgcggca
     2641 catccccggt gaccgacgcc
//
LOCUS       DATAVD010000295         4223 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_28444, whole genome shotgun sequence.
ACCESSION   DATAVD010000295 DATAVD010000000
VERSION     DATAVD010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4223
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28444"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..512
                     /locus_tag="VHX39_05390"
     CDS             <1..512
                     /locus_tag="VHX39_05390"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990588.1"
                     /translation="YTFLPLWIGRRNAGQLAGYVGAVFLLAMSVFNSGFIIGVPVFLL
                     LLMGMMFFFDGGLSNATPYSAEVFPVELLGRGTGLVQACNGIGKILGPLVLAVIAGAG
                     NLVTPHATVEAIFPAFLVLTACAVAVGLCFTLVPTERVRTPLSMHAHEDAPTALTVGA
                     RSRVSRETR"
     gene            533..1882
                     /locus_tag="VHX39_05395"
     CDS             533..1882
                     /locus_tag="VHX39_05395"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX3990589.1"
                     /translation="MGRQVEELAQFVAGASWEVVPDQVRHHTKMVFLDTLGVILAGSV
                     RPEVKRLRQQLAGGAGATVFAPGWPSNDVRTAALLNGIAGRSIELCEGLRFVSGQAAM
                     QVLPGVLAVGEQVGAGGRDMLMALLLGYDVAARLAEGFTPRPLAHQNGQVSLLASAAA
                     GARLRGLDAAGVSRAMRIATTLVLTPSYTNAVAGATALNVAGGMSGFAAALAPELALA
                     GFEAQDDAVELALGQLVGDGFTPDRLLDQLGTTWHITQNYFRLYACCNPIHPALDCLV
                     AALAELRPRPEEIVRIAFETYRFASVMRDPDPRNYFASKYSLPHAAATLAVRGSAGFA
                     ALDDTAVNDPVIAALRQRVTVVEDPAMTALAPRLRPARVTVALSDGRRAIHARDSHRG
                     DFQDPFSESELREKFRELAAVALTPKGVMLVEQAVDRWEEWDDVGVLTTLCRSNGHG"
     gene            1987..>4223
                     /locus_tag="VHX39_05400"
     CDS             1987..>4223
                     /locus_tag="VHX39_05400"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX3990590.1"
                     /translation="MTQPAEQPFRLEEATIDDLHRAIRDGRTTCVAVVQQYIDRVRAY
                     NGVSSMLVTGDGTPVADAPGVVRGGAPIRFPTQTLKASLILPDLDKYRGPPLEFGRME
                     PTASDPSVQQQFGMIVGIPNAGQVNALGTLNIRGERSVTCRGDFDRHPSQGPLPPGAP
                     PVCEMFRRQPDALERAGELDATYGRNPDLGVMPMYGVVFSFKDPFDTRDMRSTGGGDA
                     AYDIDFPARDHILVEQLRAKGAIIFAKAVNTEYNGRAGDPGGRNHPDKVLPSTLGYQR
                     STWAGNPSNPYDTTRAASLGSSSGSALSVSTNMVMISLGEETRASCRGPSNHNSVALL
                     LPHKAMIAFDGGAIGADIYCDRSGIHARRIGDAAKVLDAMKDPVNGYYDPRDPYTTVP
                     RSSVLHTGYAPHAEMSGEPNALSGVRIGVIRESMLNPGTIHVEPITTAAALEIKTVLG
                     GKLGATLVESCDPVWVPDPDMEQMETDFRTALARLVPVFMPELLFRLGDDGRPVFSDF
                     AAAIQPTEFMPGKVFGSGVMAPIDYMVEMAEGRIAPPSNLDIATVQHQELAMSFRFHI
                     PQYLTRRAADWKKLGFSETMVGFPELNARSKFWGDDQRAAFKNWEEVTDPRNALGGRQ
                     GVDERIMLRELLRRVDMMVLLENRLDALVRLHTPLPPGKIGGAIEPGTPGNLRPETLY
                     GPNAGLTEVLIPAGYVKTVYDPVFKLSADGKRYIPTLSDEPTTVADPGMPFSLVFRAE
                     PGCEDV"
BASE COUNT          714 a         1294 c         1423 g          792 t
ORIGIN      
        1 tctacacgtt cctgccgctg tggatcgggc gtcgcaacgc cggacaactg gcgggttatg
       61 tcggcgcggt tttcctgctc gccatgtcag tgttcaacag cggtttcata atcggggtgc
      121 cggtatttct gcttctgttg atggggatga tgttcttttt cgatggaggt ctgtccaatg
      181 ccacgcccta ttcggccgag gtttttccgg tcgagttgct gggccgggga accgggcttg
      241 tccaggcgtg caacgggatc ggcaagattc ttggtccgct ggtgctggcg gtgatcgccg
      301 gcgccggcaa tctggtgacg ccacacgcga cagtcgaggc gatcttcccg gcattcctcg
      361 tgctgaccgc ctgtgccgtc gcggttgggc tgtgcttcac actggtgccg accgaacgcg
      421 tgcggacccc gctatcgatg catgcgcatg aggacgcacc caccgccctt actgtgggcg
      481 cccggtcaag ggtgagccgg gaaacccgat aaggcacagg gggaaggcca tcgtgggacg
      541 gcaggtcgag gaactggcac aattcgtcgc cggcgcatca tgggaggttg tgcccgatca
      601 ggtgcggcac cacaccaaga tggttttcct cgacacactc ggcgttatcc tggccggttc
      661 ggtgcggccg gaagtgaagc gattgcgtca gcaactcgcg ggtggcgccg gcgccacggt
      721 ttttgccccg ggttggccgt cgaatgacgt gcgcaccgcg gcgctgctga acggcatcgc
      781 cggccgctcg atcgagttgt gcgagggcct gcgcttcgtc tcgggccagg cggcgatgca
      841 ggtattgccg ggcgtgcttg cggtcggaga acaggtcggc gccgggggcc gcgacatgct
      901 gatggcgctg ctgctgggat acgatgtcgc ggcgcgcctt gccgaagggt tcactccgcg
      961 gccattggca catcaaaacg gacaggtatc gttgctcgca tccgcggcgg ccggcgcgcg
     1021 tttgaggggg ctcgacgcgg ccggcgtcag tcgtgccatg cgcatagcca cgacacttgt
     1081 gctgacaccg agctatacaa acgcggtggc cggtgcgact gccttgaacg ttgccggcgg
     1141 catgagcgga ttcgcggcgg cgttggcgcc ggagctcgcc ctggcggggt tcgaagcgca
     1201 ggacgatgcg gtcgaactgg cactcgggca gttggtgggc gatggtttca cgccggacag
     1261 actgctggac caactcggca cgacctggca catcacccag aattattttc gcctctacgc
     1321 gtgctgcaac cctattcacc ccgcgcttga ttgtctcgtg gcggccttgg ccgagttgag
     1381 gccgcgtccc gaagagattg ttcgaattgc gttcgagacg tatcgcttcg catccgtcat
     1441 gcgcgatccg gatccgcgta actacttcgc ctcgaagtat tcattgccgc atgcggccgc
     1501 cacgctggcg gttcgaggca gcgccgggtt cgccgccctg gatgacaccg cggtgaacga
     1561 cccggtcatc gccgcgctgc gtcaacgggt gacggtcgtg gaggacccgg cgatgaccgc
     1621 gcttgcccct cgcctgcgcc ctgcgcgcgt gactgtcgcg ctgagtgacg gcaggcgtgc
     1681 catccatgcc cgcgacagtc accgcggcga tttccaggac ccgttctccg aatcggagtt
     1741 gcgggaaaaa ttccgcgaac tcgccgcggt ggcactgacg cccaaaggtg tcatgctggt
     1801 cgaacaggcc gtggatcgat gggaagagtg ggacgacgtt ggcgtgttga cgacgctttg
     1861 tcgaagcaac ggccacggct gatggtttcg tggccttcat gatggatcgt gctggactgc
     1921 caatgaattg accggcgcat gaggttgctt acgctgccgg cgacccggat acgaaaggga
     1981 ttcccgatga cgcagcccgc cgagcagccg tttcgattgg aggaggccac gatcgatgat
     2041 ctgcaccggg cgatccgcga cggcaggacc acctgcgtcg ccgtcgtgca gcagtacatc
     2101 gatcgcgtgc gggcctataa tggcgtcagc agcatgctgg tcaccgggga cggcacaccg
     2161 gtcgccgacg cacctggcgt ggtccgtggc ggggcaccga tccgtttccc gacacagaca
     2221 ctgaaggctt cccttatcct gcccgacctg gacaagtacc ggggcccacc actggagttc
     2281 ggacgcatgg agccgacggc ttcggacccg tcggtacagc agcaattcgg catgatcgtg
     2341 ggtatcccca atgccggcca ggtcaacgcg ctgggcacgc tgaacatccg cggtgagcgt
     2401 tccgtcacct gccgcggcga tttcgaccgc catccctcac agggtccgct gccgcccggc
     2461 gcacccccgg tctgcgagat gtttcgccgg cagcccgatg cgctggagcg cgccggcgaa
     2521 ctggacgcga cgtatggccg caacccggac ctgggggtga tgccgatgta tggggtcgtg
     2581 ttctccttca aggatccgtt cgacaccagg gacatgcgct ccaccggcgg cggcgacgcg
     2641 gcctacgaca tcgattttcc cgcccgcgac cacatcctgg tggaacagct tcgcgccaag
     2701 ggggcgatca ttttcgccaa ggcggtgaac accgaataca acggcagggc aggggacccc
     2761 ggcgggcgga accatccgga caaagtgctg ccctccacat tgggctatca gcgcagcacc
     2821 tgggccggca atccgtccaa cccgtacgac accacccgcg ccgcctcgct cggttccagc
     2881 tccggatcgg cgctgtcggt cagcacgaac atggtcatga tcagcctggg tgaggaaacc
     2941 cgagcgtcct gtcgcggtcc gtcgaaccat aattcggtgg cgctgttgct gccgcacaag
     3001 gcgatgatcg ccttcgatgg cggggcgatc ggcgcggaca tctattgcga tcgcagcggc
     3061 atccacgcgc gccgcatcgg cgatgccgcc aaagtgctcg atgcgatgaa agatccggtc
     3121 aacggctact acgatccacg cgatccgtac acgacagtgc cgcgttcatc ggtgcttcat
     3181 acgggctacg cgccgcatgc ggagatgtcg ggcgaaccga acgccttgtc gggcgtacgc
     3241 attggcgtca ttcgggaatc gatgctgaat ccgggcacga ttcacgttga gccgatcacc
     3301 actgccgccg cgctggagat caagacggtg cttggcggaa aactgggcgc gaccctggtg
     3361 gaatcgtgcg acccggtgtg ggtgccggat cctgacatgg agcaaatgga gacggatttc
     3421 cgcacggccc tggcgcgtct tgtgccggtg ttcatgccgg agctgttgtt ccgactgggt
     3481 gacgatgggc ggccggtgtt ctcggatttc gctgctgcca tccagccgac cgagttcatg
     3541 cccggcaagg tgttcggcag tggagtgatg gcgccgatcg actacatggt ggagatggcg
     3601 gagggccgga ttgctccgcc gtcgaatctg gacattgcga cggtgcagca tcaggaactg
     3661 gcgatgtcgt tccgattcca tatcccgcag tatctgaccc gccgcgccgc ggattggaag
     3721 aaactgggct tcagtgaaac tatggtgggc ttccccgagc tgaatgcacg ctcgaaattc
     3781 tggggtgacg atcagcgggc cgcattcaag aactgggagg aagtgaccga cccgcgcaac
     3841 gcgctcggcg ggcggcaggg cgtcgatgaa cgcatcatgc tgcgcgagct gctgcgccgg
     3901 gttgatatga tggttctgct ggagaaccgg ctggatgcgc tggtacggct gcatacgccg
     3961 ctgccgccgg ggaagatcgg cggcgcgatc gagccaggca cgccgggcaa tttgcgtccg
     4021 gaaacactgt atgggccgaa cgccggcctg actgaggtgc tgattcccgc aggctatgtg
     4081 aagaccgtct acgatccggt gttcaagctg agtgccgacg gcaaacgcta catacccaca
     4141 ttgtcggatg aacccacgac cgttgccgat cccggaatgc cattctcgct ggttttccgt
     4201 gccgagccgg ggtgcgagga cgt
//
LOCUS       DATAVD010000296         5078 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2634903, whole genome shotgun sequence.
ACCESSION   DATAVD010000296 DATAVD010000000
VERSION     DATAVD010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5078
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2634903"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..1784)
                     /locus_tag="VHX39_05405"
     CDS             complement(78..1784)
                     /locus_tag="VHX39_05405"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3990591.1"
                     /translation="MAYDLLIKNGLVVDGSGMPAFRGDVGVRNGKIAEIGKLSGPATR
                     TVDASGLAVTPGFIDNHAHYDGQVTWDPLCTFSPQHGSTTVIFGNCSLALAPVRPGRE
                     HRTAEFLSYVEAIPMEVLNTIDVDWETIPQYMDKLDKTLGVNAGTLIGHTPVRHYVMG
                     DDCQGRAATDGEIKAMQDVVRDGLTAGALGLSLSRQKGHFDPQGVPIPALWADDKEIF
                     ALADVLRELSTGTIQVGGGVDQELKDGMMARLAEATGRTVVYNNLAQTVRNPDKWKIH
                     MARVDETVAKGIKAYPMCSPNRVTQDFTMRNCQVFRGLPTWHPILISTDEEKLRAYSD
                     PVVRQKLHEEAVERKGDLSMANGFSKTWWDYMWVNEPALEKNREFQFKTIGEIAKLTN
                     KRVIDAFLDLVVEENLDTRFLQAENNIDDEAMTKILTYPNAIVGLGDGGAHVQFHGGY
                     GYTTRLLGEWVRKRQVLTLEQAIRKLTFESASTFGIHDRGMLRPGLAADIVLLDPQTV
                     NAGEETVVHDFPGGGWRIEEKAIGIHMTIVNGQVLLEDGKHTGNLPGRVIRNSWYHEH
                     RN"
     gene            complement(1888..2481)
                     /gene="recR"
                     /locus_tag="VHX39_05410"
     CDS             complement(1888..2481)
                     /gene="recR"
                     /locus_tag="VHX39_05410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HEX3990592.1"
                     /translation="MGGPEVEHLIGLLAKLPGMGPRSALRAALRMLQHPEARMLPLAA
                     ALAEAARAVKSCADCGNLDSRDPCSICADQNRDRSVICVVEGVGDLWALERAGVHHGL
                     YHVLGGTLSALGGVRPEDLNVSTLISRLADGSVKEVILALGATVEGATTAHWLTDRLR
                     PLGVTVTRVGQGVPMGGALDALDDGTLAAALRARRVS"
     gene            complement(2491..2814)
                     /locus_tag="VHX39_05415"
     CDS             complement(2491..2814)
                     /locus_tag="VHX39_05415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEX3990593.1"
                     /translation="MKNLAGLMKQAQQMQSKMQEMQEQLTRLEMIGEAGAGLVRVTLN
                     GKGEMRSVTIDPKVVDPADTEMLQDLIVAAHRAAREKIDAASQAEMQKVTGGLQLPPG
                     MKLPF"
     gene            complement(2811..4676)
                     /locus_tag="VHX39_05420"
     CDS             complement(2811..4676)
                     /locus_tag="VHX39_05420"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEX3990594.1"
                     /translation="MAGLFQDVAPEDEPPPAGPGLFGDALPVSPPPPEHAAAYRVLAR
                     KYRPTTFDDLIGQESMVRILRNAFAIGRVAHAFMLTGVRGVGKTTTARIIARALNCVG
                     PDGNGGPTADPCGVCGNCLAILAEREPDVFEMDAASRTGVDDVREIIEVSRSRPMKIR
                     TKVFIIDEVHMLTRNAFNALLKTLEEPPPHVKFAFATTEIRKVPITVLSRCQRFDLRR
                     VRVSELHAHFARIAEQEAVAIEPAALDLIARAADGSVRDGLSMLDQAIAQAEGTISGA
                     QVAEMLGQADRDAVFDLLEAVMGGKPAAALAITDRAYERGADLGAVLQDLLELLHTTT
                     RLKSIPGLRDSAELPETERTRGAAIADRLSVPVLARAWQMLLKGVGEVETAPDRRAAA
                     EMVLVRLCHVSDLPSPADLVRRLSTGGTAAPATTVPAGPPGGGGARAMSRAVGAAAAQ
                     PVPLTELAPAGPVLNSFRDVAALVKDHREAMLHAHLLHSTHLVRFAAPVIELRTEPDA
                     PRDLAPKLAALLSNATGTRWTIALSTAEGEPTLAEQGNAADATRREAAADHPLIRAIM
                     AAFPGARIDSVHDRNVDDYGLPDAPPTLALGEPDMPDFAPPDAEFSDDTPWESDP"
     gene            complement(4739..4837)
                     /gene="ffs"
                     /locus_tag="VHX39_05425"
     ncRNA           complement(4739..4837)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VHX39_05425"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
BASE COUNT          960 a         1728 c         1487 g          903 t
ORIGIN      
        1 ggcagatcag actcacggca acgcctgacc ggcatcgggg ccactccccg atgccggtcg
       61 cgcaacaatc agacctctta gttccggtgc tcgtgatacc aggaattccg gatcacccgg
      121 cccggcaggt taccggtgtg cttgccgtcc tcaagcaaca cctgaccgtt gacgatggtc
      181 atatggatac cgatcgcctt ttcctcgatg cgccagccgc cgcctgggaa gtcgtgcacg
      241 acggtttcct cgccggcgtt caccgtctgc ggatccagca acacgatgtc cgccgccagg
      301 cccggccgca gcatgccgcg gtcgtgaatg ccgaacgtcg acgccgattc aaacgtcagc
      361 tttcgaattg cctgctccag cgtcagcacc tggcgtttgc gcacccactc gcccaacagc
      421 cgcgtggtgt aaccgtatcc gccatggaac tgcacgtgcg cgccgccgtc acccagacca
      481 acaatcgcgt tgggataggt gaggatcttc gtcattgcct catcgtcgat attgttctcg
      541 gcctgcagga accgcgtatc gagattttcc tcgacgacca gatcgaggaa cgcgtcgatc
      601 acccgcttgt tggtcaactt ggcgatttcg ccgatcgttt tgaactggaa ctcgcggttc
      661 ttctccagtg ccggctcgtt gacccacata taatcccacc aggtcttcga gaacccgttg
      721 gccatggaca gatcgccctt ccgctccacc gcttcctcat gcagtttctg ccgcaccacc
      781 gggtcggaat aagcccgcag tttctcctca tcggtagaaa tcagaattgg atgccaggtc
      841 ggcaggccgc ggaacacctg gcagttgcgc atggtaaaat cctgcgtcac ccgattcggg
      901 ctgcacatcg gatacgcctt gatccccttg gccaccgtct catcgacgcg tgccatgtgg
      961 attttccact tatccggatt gcgcacggtc tgcgccagat tgttgtagac cacggtgcgg
     1021 ccggtcgcct cggccagacg cgccatcatg ccatccttaa gttcctgatc gacaccgccg
     1081 ccaacctgga tcgttccggt gctgagttcg cgcaatacat cggcgagcgc aaagatctcc
     1141 ttatcgtccg cccacagcgc ggggatcggc acgccctgcg gatcgaaatg ccccttctgc
     1201 cgagacagcg acaaaccaag cgcacctgcc gtcaggccat cgcgcaccac atcctgcatc
     1261 gccttgattt caccgtcagt ggcggcacgc ccctggcagt cgtcacccat cacgtagtgc
     1321 cgcaccggcg tgtgcccgat caacgtcccg gcattgacgc ccaaggtctt gtcgagcttg
     1381 tccatgtatt gcgggatcgt ttcccaatcg acatcgatgg tgttcagcac ctccatcgga
     1441 atcgcttcga cataggacag gaactccgcc gtccgatgct cgcggccagg ccgcaccggc
     1501 gccagtgcca gtgaacagtt accaaaaatc accgtggtcg aaccatgctg cggcgagaac
     1561 gtgcacaacg gatcccaggt cacctgaccg tcataatgcg cgtgattgtc gataaagccc
     1621 ggcgtgactg cgaggccact ggcgtcgacg gtccgtgtcg ccggaccact caatttgccg
     1681 atttcggcaa ttttaccatt acgcacgccg acgtcgccgc ggaatgccgg catgccggaa
     1741 ccgtccacga ccaatccatt tttgatcagc agatcgtatg ccattcttat gccctcctgg
     1801 atttccctgg gcgcgcgaac caccaggcgc ggaacgccgc ctcgcgatca gcctggcacc
     1861 aacaaccctg gctggcaaac agccaggtca ggacacgcga cgggctcgca acgctgcggc
     1921 gagcgtgccg tcgtccagcg cgtccaatgc gccgcccatc ggcacgccct gtcccacgcg
     1981 cgtaacggtc acgccaagcg gacgcagccg gtcggtcagc caatgcgccg tggtcgcacc
     2041 ttcgactgtt gcacccaggg caaggatcac ttccttgacc gacccatcgg caagccggct
     2101 gatcagtgtc gaaacgttta aatcctcggg ccggacgccg cccagtgcgg agagggtgcc
     2161 gccgaggacg tgatacaggc cgtggtggac cccggcacgt tcaagtgccc aaagatcgcc
     2221 gacgccctct accacgcaga taacggaacg atcgcgattc tggtcggcac agatcgagca
     2281 tggatcccgg ctgtccaaat tgccacaatc ggcgcaggat tttaccgcgc gcgccgcctc
     2341 ggcgagggcg gcggccagcg gcagcatgcg ggcttccgga tgttgcaaca ttcgcaaggc
     2401 ggcacgcagc gcactgcgcg gccccatgcc aggcagtttc gccaacaaac caatcaggtg
     2461 ttcaacttcg ggaccaccca taggaagcag tcagaacggc agtttcatac caggtggcag
     2521 ttgcaggccg ccggtcactt tttgcatttc cgcctgcgac gcagcgtcga tcttttcgcg
     2581 ggcagcccga tgcgcggcca cgatcagatc ctgcagcatc tcggtatcag ccggatcgac
     2641 caccttcgga tcgattgtga cgctgcgcat ttcacccttg ccgttcaacg tcacacgcac
     2701 caaaccggcg cccgcctcac cgatcatttc caggcgagtc agctgctcct gcatctcctg
     2761 cattttggac tgcatctgct gcgcctgttt catcaggccg gcgaggttct tcatggatcg
     2821 gactcccacg gagtgtcatc ggaaaattcg gcatcgggcg gggcgaaatc gggcatatcc
     2881 ggttccccta aggcgagcgt cggcggcgca tccggtagcc catagtcgtc aacattacgg
     2941 tcgtgcacgg agtcgatgcg cgcgcccgga aacgccgcca tgatcgcgcg gatcaacgga
     3001 tgatcggccg ccgcctcgcg gcgcgtcgca tcggcggcat tgccttgctc ggccaaggtc
     3061 ggctcgccct cggcagtgga caacgcaatg gtccagcgcg tgcccgtggc gttcgacaac
     3121 aacgccgcca gcttcggcgc cagatcgcgc ggtgcgtccg gctcggtacg caactcgatt
     3181 accggtgcgg cgaaacggac caaatgtgtg gaatgcaaca gatgtgcatg gagcatggct
     3241 tcgcgatggt ctttcaccaa agcagcgaca tcgcggaaac tgttcagaac cgggccagcg
     3301 ggcgccaatt ccgttaaagg caccggctgt gcagcggcag cgccaacagc gcggctcatg
     3361 gcacgcgctc cgccgccacc gggcggtcca gccggcacgg tggtggcagg agcggccgtt
     3421 ccacccgtgc tcaatcgccg taccaggtcc gccggcgagg gcagatcgga aacatgacac
     3481 agccgcacca gaaccatttc ggcagcggcc cgacgatccg gcgcggtttc cacctcgccg
     3541 acgcctttca ataacatttg ccaggcgcgg gccagcaccg gaacgctcag ccggtcggcg
     3601 attgcggcgc cgcgggtacg ttcggtttcg ggcagttcgg cgctatcgcg caaacccgga
     3661 atcgatttca gccgcgtcgt cgtgtgcaac agttcgagca ggtcctgcag cacagcgcca
     3721 agatcggcgc cgcgctcata ggcgcggtca gtgattgcca gcgcggcggc gggtttgccg
     3781 cccatcacag cctccagcaa atcgaacacc gcatcgcgat cggcctggcc caacatctcg
     3841 gcaacctgcg cgccggatat ggttccttcc gcctgcgcaa ttgcctgatc caacatcgac
     3901 agcccgtcac gcaccgaccc atccgccgcc ctggcgatca ggtccagcgc cgcgggttcg
     3961 atcgcaactg cctcctgctc tgcgatgcgg gcgaaatggg cgtgcaactc cgacacccgc
     4021 acccggcgta aatcgaaacg ctggcagcgg gacagcaccg taatcggaac tttgcggatt
     4081 tccgtcgttg caaacgcaaa cttaacgtgt ggcggcggtt cctccaaagt cttcaacagc
     4141 gcgttgaagg cgttccgcgt cagcatatgc acttcgtcga tgataaacac tttcgtgcgg
     4201 atcttcatgg gccgcgagcg gctgacctca atgatctcgc gcacatcgtc gacgccggtg
     4261 cgggaagccg cgtccatctc gaacacgtcc ggctcgcgct cggccagaat ggcgagacaa
     4321 ttgccgcaga cgccgcacgg atcggccgtc ggccctccgt tcccgtcggg tccgacacag
     4381 ttcaatgcgc gcgcgatgat gcgcgccgtc gtggttttgc cgaccccgcg caccccggtc
     4441 agcatgaacg catgcgcaac gcggccgatg gcgaaggcat tgcgcaggat gcgaaccatc
     4501 gactcctggc cgatcaggtc gtcaaacgtg gtcggccggt atttgcgagc caacacccgg
     4561 taggccgcag catgttccgg cggcggcggc gagaccggca gcgcatcgcc aaacagccca
     4621 ggacccgccg ggggaggctc gtcttccggt gcgacatcct ggaacaggcc ggccatgcgt
     4681 gcgtgggcct cctgccgccg gggcggcatg gccagggcgg cgtgaaccga tgggagaaag
     4741 tgagaggccg ggcaacgacc cgggcggaac tcgccgcggc tgcttccttc cggacctgac
     4801 cagggtagac aaggcgcccg tccgccgccg acctctcgaa tcttatctaa tgggtcggtg
     4861 gttgggcggc aaggcggctt cgatcacccc cgccgaacga gacgtcagaa cccgaactcg
     4921 tcaaccaacg tggccagacc gcacagcgct tcccgccgca ccgaagccag cctcgcctga
     4981 aatgctcgca attccctggg cgataacacg taatggccac catccttgcg ggacgacaat
     5041 tcgccgcgag caatcaggcg catcaccgac ggacgggc
//
LOCUS       DATAVD010000297         4006 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1517461, whole genome shotgun sequence.
ACCESSION   DATAVD010000297 DATAVD010000000
VERSION     DATAVD010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4006
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1517461"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..272)
                     /locus_tag="VHX39_05430"
     CDS             complement(<1..272)
                     /locus_tag="VHX39_05430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990595.1"
                     /translation="MSQTTAPEPIVTHRAPEAENSRPPGRRRTRTIALSAILLAALTA
                     AGVGEWAWRGNATTAAPLPPPPRVTVSTPLRDTVAATTIILGQFSAV"
     gene            441..1049
                     /locus_tag="VHX39_05435"
     CDS             441..1049
                     /locus_tag="VHX39_05435"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX3990596.1"
                     /translation="MKVTSVKVSEHREALLATANRLMQERGFDGAAVADICREAGLTQ
                     GALYGQFKSKDALAAEAIRRTCADGAAVWGGLRDGGPDALSAFIDAYLCETHASNPGM
                     GCTLAACVSEIGRQDPAIISAYAEGFRRMSDLVRQALPAGTSPEEAHSRAMVLLAGMV
                     GAVAIARALEPADPKLSRDVLASARVELKRLALGSASAPDAG"
     gene            complement(1084..1851)
                     /locus_tag="VHX39_05440"
     CDS             complement(1084..1851)
                     /locus_tag="VHX39_05440"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3990597.1"
                     /translation="MGRLDGKVAAITGGASGIGEATVRRFIAEGASVAFCDRDGERGQ
                     RVAAELQAAGAKVAFTQADVGTEAACLNFVNAAAQKFGRLDILINNAGIRKYEKVDEA
                     SGASWAEILNVNLMSYVYCAKAAVPLMRRNGGGAIVNTASVRSVVAGGGNLQYDTTKA
                     AIAGLTRGLAADHSAEGIRVNAVGPGPIFTPFHARRIAAAGETVDQYNAKAAQGTMMK
                     RPGRAEEVAAAILFLASDDASYVTGALLFVDGGMTAM"
     gene            complement(2048..2287)
                     /locus_tag="VHX39_05445"
     CDS             complement(2048..2287)
                     /locus_tag="VHX39_05445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990598.1"
                     /translation="MPLKVLSAAGKPDDDSEWDDGITVEFSQGGTAETPISAQQAGIH
                     YQSTLRRDPAFVIRVLVTRINISTLPRLSPEQVRG"
     gene            2941..>4006
                     /locus_tag="VHX39_05450"
     CDS             2941..>4006
                     /locus_tag="VHX39_05450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton-translocating pyrophosphatase"
                     /protein_id="HEX3990599.1"
                     /translation="MLLAQILIIACGVAALIYGLITSRQVLAHDPGNARMQEIAAAVQ
                     EGARAYLNRQYMTIGIVGIVILIVLGVLLGIHTAIGFIIGAVLSGAAGYIGMNVSVRA
                     NCRTAQAARDGLAAGLDVAFKAGAITGMLVVGLGLLGVAGYYFVLRAGLAPGADIRPV
                     LEAMVALGFGGSLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNV
                     GDNVGDCAGMAADLFETYAVTIVATMLLAAIFFTGETRDALLMLPLGIGGICILTSIV
                     GTYFVKLGPDNGIMKALYKGLIVTGALSIVGVAIVIASFVGFSTPLAVTGGGSVTGWS
                     LFVCAVVGLVITGAIVWITEY"
BASE COUNT          644 a         1253 c         1341 g          768 t
ORIGIN      
        1 accgcggaga actggcccag gataatggtg gtagcggcga cggtatcgcg cagcggcgtg
       61 ctgaccgtga cacgaggcgg cggcggcagt ggagcggctg tggtggcatt gccccgccac
      121 gcccactcgc cgacgcccgc agcggtgagc gccgccaaaa ggatagcaga cagcgcaatg
      181 gtcctcgtgc gccgccggcc ggggggacgg ctgttctcgg cctcaggcgc acgatgggtg
      241 acaatgggct ctggcgcggt tgtttgtgac atcggtgttg ctcgcccttg acttaaggaa
      301 tatggccgtt ggcacggtct gggttattgc ccttgcggga cgagcgccgg tgccccattt
      361 atgggacaat catagcgcgt tctatcaatg gcgttagata ggggccgcta tgaatagatc
      421 aagggagaca ggagcgatcc gtgaaggtca cgagtgtgaa ggtttcggaa catcgtgagg
      481 cgctgctcgc aaccgcaaac cgcctgatgc aggagcgcgg gttcgacggc gcagcggtgg
      541 ccgatatttg tcgcgaggca ggcctgactc agggcgcgct gtacggccag ttcaaatcga
      601 aggacgctct ggccgccgag gcgatccggc ggacctgtgc ggacggagcc gcggtctggg
      661 gcgggctacg cgatggcgga cctgacgcgt tgtcggcctt catcgacgcg tatctatgcg
      721 agacgcatgc cagcaatccg gggatgggct gcactttggc ggcctgcgtg tcggagatcg
      781 gacggcagga cccggcgatc atctcggcgt atgccgaagg gtttcgccgg atgagcgacc
      841 tggtgcgcca ggcgctgccg gcaggcacgt cacccgagga agcccacagc cgcgcgatgg
      901 tgctgcttgc aggaatggtt ggcgctgtgg cgatcgcgcg ggccttggag ccggccgatc
      961 ccaagctgtc cagggacgtg ctcgcctccg ctcgggtgga gttgaaacgg ctggcactcg
     1021 ggtcagcgag cgcgccggac gccggctgac cggatcagca ggcgtggccc agatgccggg
     1081 tcctcacatg gcagtcatgc cgccgtctac aaacagcagg gcgccggtga cgtaggacgc
     1141 atcgtcggaa gccaggaaca ggatcgcagc ggcgacctcc tcggccctgc ccgggcgctt
     1201 catcatggtg ccttgcgcag ccttggcgtt gtactgatcg acggtctcac cggccgcggc
     1261 gatgcggcgt gcatggaatg gcgtgaagat cgggccaggc ccgacggcgt tcactcgaat
     1321 gccctccgcc gaatggtccg cggccagccc ccgtgtcaaa cccgcgatcg cagccttggt
     1381 ggtgtcgtac tgcaggttgc cgccgcctgc gacgacagat cgcaccgagg cggtgttaac
     1441 aatggcgccg cctccgttgc ggcgcatcag cggcaccgcc gccttggcgc aatagacgta
     1501 actcatcagg ttgacgttga ggatctcggc ccaacttgcc ccgctcgcct catcgacctt
     1561 ttcgtattta cgtatgccgg cgttgttgat gaggatgtcg aggcgcccga atttttgcgc
     1621 ggcagcgttg acgaagttga ggcacgcggc ctcggtgccg acatcagcct gggtgaaggc
     1681 aaccttggcg ccggcggcct ggagttcggc cgccacgcgc tggccgcgct cgccgtcgcg
     1741 gtcgcagaat gccacgctgg cgccctcggc gatgaagcgg cggaccgtcg cctcgccgat
     1801 gccggatgct ccgccggtta ttgccgcgac cttgccgtca agcctgccca tgttgttctc
     1861 ccgttcactg gattgccaaa cgcgcaccca cgatacgccg tatccatcgg gcgagcttgc
     1921 cctgttggcc ggcgcggatg tccgacctta acaggctgca cgggaacccc gaaatctcga
     1981 gtgtttgccg gccacgttgt ccgcagagct ggttcccgga atcggtgaat cgtggcccac
     2041 tcaaccgtca tccccggact tgttccgggg acaatcgggg caaggtgctg atgttgatcc
     2101 gcgtgacaag cacgcggatg acgaaagcgg gatcgcgacg cagggtcgac tgatagtgga
     2161 tgccagcctg ctgggcggag atcggcgttt cggcagttcc accctggcta aattcgacgg
     2221 tgatcccgtc atcccattcg ctgtcgtcgt ccggtttgcc ggcggcgctc agtaccttaa
     2281 ggggcactca gtaccttcgg tgcggacgtg tcacgcccag ccgggaggct tgtcctcagg
     2341 agcggcggcg tgtcgcgctc ttcgattgca gttcgcgtct ggcaagttcg atcaacgggt
     2401 cggcgtgccg attctcataa cgaaccctgg cctgggagcg ttcgtgcacg tgctccatca
     2461 ccgcaaggag ttccgtcgcc gttcggatgt cacctcggta gagggcgagt tggaggacct
     2521 cattaatagc atccgccaga cgccggccgg cccaacggcc cgtcaccgca ggttcccccg
     2581 aaccttcatt ctgagacggc atatcactcg caggcgatgg atcttccatc gtggcaactc
     2641 caaatttgct ggcagggaac tgtagcggac tgctcccctg tatcggcacc aacgttgcgg
     2701 cttccttacg ggccgtctta acgaaaaact aaccgatcgt gcccggggtg gttcctgtgg
     2761 gccgatggcc cgcaatgggc cggagcattc gaactgaccc acgaccaccg gttgaacata
     2821 tttgcgtctc cgcaaaggaa ctggcatacc gccgcgccac ttccaccctg ggcttcgggg
     2881 cgggcgcgct tgcccatacc cctggtccat ccgtaagaca gaccaagggg aacatttcgg
     2941 atgctattgg cccaaatttt gatcatcgcc tgcggtgtcg cggcgttgat ctacggcctg
     3001 atcaccagcc ggcaggtgct cgcgcacgac cccggcaacg cccgcatgca ggagatcgcc
     3061 gcggccgtcc aggagggcgc gcgcgcctat ttgaaccgcc aatatatgac gatcggcatt
     3121 gtcggcattg tcatcctgat cgtgcttggc gtgctgctgg ggatccatac cgccatcggc
     3181 ttcatcatcg gcgccgtgct gtccggtgcc gcgggctata tcggcatgaa cgtctcggtc
     3241 cgcgccaatt gccggaccgc tcaggccgcg cgggacggcc tcgcggctgg ccttgacgtc
     3301 gccttcaagg ccggagcgat caccggcatg ctggtggtcg gcctcggcct gttgggcgtt
     3361 gccggctact acttcgtgct gcgagccggc ctggcgccgg gcgccgacat ccggccggtg
     3421 ctcgaggcaa tggttgctct cggcttcggc ggctcgttga tttccatctt cgcccggttg
     3481 ggcggtggca ttttcaccaa gggggctgac gtcggagccg acctggtggg caaggtcgaa
     3541 gccggcatcc ccgaggacga cccccgcaac cccgccgtca tcgccgacaa cgtgggcgat
     3601 aacgtgggcg actgcgccgg catggccgcc gatttgttcg agacctatgc ggtcaccatc
     3661 gtcgccacca tgctgctcgc cgcgatcttc ttcaccggcg agacgcggga tgcgctgctg
     3721 atgctgccgc tggggattgg cggcatttgc atcctgacct cgatcgtcgg cacctatttc
     3781 gtcaaactgg gcccggataa cgggatcatg aaggcgctgt acaagggcct gatcgtgacc
     3841 ggggcgctgt cgatcgtcgg cgtcgccatt gtgattgcca gctttgtcgg cttcagcacg
     3901 ccgctggcgg tcactggcgg cggttcggtg accggctggt cgctgttcgt ttgcgctgtg
     3961 gtcggcctgg tgattaccgg agcgatcgtg tggatcaccg aatact
//
LOCUS       DATAVD010000298         6114 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_773986, whole genome shotgun sequence.
ACCESSION   DATAVD010000298 DATAVD010000000
VERSION     DATAVD010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6114
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_773986"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..360)
                     /locus_tag="VHX39_05455"
     CDS             complement(<1..360)
                     /locus_tag="VHX39_05455"
                     /inference="COORDINATES: protein motif:HMM:NF014635.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF169 domain-containing protein"
                     /protein_id="HEX3990600.1"
                     /translation="MTKDWAKLVADLERLLKLRNPPFGMKLFERAEDMEAIPRIRRPK
                     VVHAFDQVVAQAARLGWTVGVTAENLVGAQCRAVIGLGNAKDDEWKSGQRMVGVWYST
                     PDDAGAHQAAMNCVDDGQ"
     gene            485..2419
                     /locus_tag="VHX39_05460"
     CDS             485..2419
                     /locus_tag="VHX39_05460"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX3990601.1"
                     /translation="MIVTTFPHAIREIEQLWIPLADGTRLAARIWLPQDADRNPVPAV
                     LEYLPYRKRTGTYERDALTHPYLAGNGYAAVRVDIRGSGESDGLLFDEYALQEQDDAL
                     EVIAWLAAQPWCNGAVGMMGISWGGFNALQVAARRPPALKAIITLCSTDDRYRDDVHY
                     MGGALLRSGFGWASFLFTAMCHPPDPALVGAGWRATWLNRLQNLPLFLEPWLRHQRRD
                     AYWQHGSVCEDYDAIQCPVFAVGGWTDGYTNAIPRLLTHLSVPRKGLVGPWAHGYPHV
                     ALPGPQIGFLQEALRWWDQWLKGKDTGVMDEPMLRAWMTESVPPAPFHRALPGRWVAE
                     TTWPPPGVVPHRLHLADAGLQTTDTGLTPRAVCSPLTIGKDGGSWCPFGSAPDQAGDQ
                     QDDDAMSLLFETAPLATRMETLGAAVVVLDVASDKKLANLAVRLCDVHPDGASLRISY
                     GILNLAYRDSYESPALLQPGLRYRIRIQLNDAGSVFPAGHRIRLALSTNYWPMIWPTP
                     DRPTVTVFSGTVELPIRPVNPSDALLPALPEPETATPEPTTQTQQGGVRIDRLGLELS
                     TDGDFRTHMEPDDPLSAVVEMRQSQTVSRGSWRTRFETTTRISCTRNTFNLHATMCAW
                     EGEVEVCRRTWDTSVPREFI"
     gene            complement(2416..3129)
                     /locus_tag="VHX39_05465"
     CDS             complement(2416..3129)
                     /locus_tag="VHX39_05465"
                     /inference="COORDINATES: protein motif:HMM:NF024676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family protein"
                     /protein_id="HEX3990602.1"
                     /translation="MRRADRLFDIIQTLRVATKPLTAATLAEQLEVTVRTVYRDIAAL
                     QASRVPIEGAAGIGYVLRRGFDLPPLMFTADELDAITVGARLVRRLRDPGLQDAADSV
                     LAKITTILPETLRHGVVDAPFYVSAGQAETPTGIDLSDVRYAIRETRKMRVTYTDARG
                     QRSNRTIWPIAMAYYVDATLIGAWCELRQDYRHFRVERIVTSTLLDETFPTGGGKLME
                     GWLAQRAMDEAAVSLLVRT"
     gene            3232..4524
                     /locus_tag="VHX39_05470"
     CDS             3232..4524
                     /locus_tag="VHX39_05470"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990603.1"
                     /translation="MSISHLSTASARRDLKSRIAASETEFRRGWPAVLACFCVAVFAW
                     GFGFYGQAVFLAELHRTHGWPTSTIGAATTVFYLCGALLMPFIQQTLDRTGARSLLIG
                     GVLLLGLGAAGFSNAAQPWQLFVAGVVMAAGWAASSGPAIATILALWFDRRRGFAISL
                     ALNGASASGFTIAPLLVHLSQTIGLQRAVVETVLAGWIILIPIVLYCARPGTAALPSV
                     IMPTRTGPDGRSDTLRSWHFWSVALPFALAIAAQVGFIVHMVAYLLPLLGAAGTGAAV
                     MCSSLAAMVGRLGLGAVIDRLPRRATTAVCFASQACGLGLLLAMPDSAAATYLGIALF
                     GLSVGNVITLPAVIVHAEFSAASFGLIIGLSGAITQFALALAPGAFGMLHDLTGNYDA
                     VLLVCIGLQLVGAGLVLCRRRGGSIAGPGLRRRSRRSA"
     gene            complement(4477..5775)
                     /locus_tag="VHX39_05475"
     CDS             complement(4477..5775)
                     /locus_tag="VHX39_05475"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990604.1"
                     /translation="MPHDLERATIRTVAWRLLPLVFLLYLLSLIDRVNLGFAALTMNK
                     DLGLTPYTYSLGVAAFFFGYIPCEVPSNLILERIGARRWIGRIAITWGLTASAMALVS
                     GQPSFLLVRFLLGAAEAGLFPGMLLYLTYWFPRAYRARVNVALVLAIPASSAIGGPIA
                     TSLLELNGLFGITGWKWLFLLEGIPTILLGFVVLRLLTDRPANAAWLPPENRAWLEET
                     MARERASVEAVHSQLSVRKGLTDPRAMLLCFVYFAFGTISYSMGYFLPLIVKGWGVSN
                     FQVGWIVAVPSIVGIFAMIAGNVFADRIEDKRPMLSALMILCAIGWTGMGIYATSAWA
                     LIAVTLVEIGIGIARPMFWTVPPLFLSGAALAAVMALISVFANFGGIIGPVVIGWLKT
                     TTNSFSGGLYYIACCAFVSAIAILALRTAPRASAQPRAGD"
BASE COUNT         1096 a         1881 c         1993 g         1144 t
ORIGIN      
        1 ctggccgtca tccacacagt tcattgccgc ctgatgagcc ccggcatcgt ccggcgtcga
       61 gtaccaaacc ccaaccatcc gctggccgga cttccactca tcgtcctttg cgttgccaag
      121 tccgatcact gcccggcatt gcgcgccgac caaattctcg gcggtcacgc cgacggtcca
      181 acccagacgt gccgcctggg ccaccacctg atcaaaggcg tggaccacct tcggccggcg
      241 gatgcgaggg atcgcctcca tgtcctccgc ccgctcgaac agcttcatgc caaacggggg
      301 attgcggagc ttcaacaggc gttcgaggtc ggcgaccagc ttcgcccaat ccttggtcat
      361 gtcggtgtcc ctccgggttt cacggcatga tcggtcatcg cgcgtgcaat gttaaggagg
      421 gtggcgcgag cccgccgccc agggatatat cgacggaccg ttcacgccga agcgagccgc
      481 acgcttgatt gtcaccacgt tccctcatgc gatacgcgag atcgaacagc tatggatccc
      541 gttggccgac ggcacccggc tggcggcccg gatctggctg ccccaggatg cggatcgcaa
      601 cccggttccg gccgttctcg aatatctccc ctatcgcaaa cgcacgggca cgtacgagcg
      661 cgacgcgctg acccatccgt acttggccgg caatggctat gccgcagtcc gcgtcgacat
      721 tcgcggcagc ggcgaatccg acgggctgct gttcgacgaa tacgcgttgc aggagcagga
      781 tgacgcgctc gaagtgatcg cctggttggc agcgcagcct tggtgcaatg gcgcggtcgg
      841 catgatgggg atctcctggg gcggcttcaa tgcgttgcag gtcgccgcac gtcgcccgcc
      901 ggcacttaaa gcgatcatta cgctctgctc gacggacgat cgttaccggg atgatgtgca
      961 ctacatgggt ggcgcattgc tgcgatccgg tttcggatgg gcatcgtttt tgttcaccgc
     1021 gatgtgccac ccgccggatc ctgcactggt cggcgcaggc tggcgcgcga cgtggctcaa
     1081 tcggctgcag aacctgccat tgtttctgga accatggctg cgccatcagc gccgggacgc
     1141 gtactggcag cacggttcgg tgtgcgaaga ttacgacgcg atccaatgtc cggttttcgc
     1201 agtcggcggc tggaccgatg gctacaccaa tgccatcccg cggctgctta ctcacctgtc
     1261 ggtgcctcgc aagggcctcg ttgggccatg ggcgcatggc tatccgcacg tggcacttcc
     1321 gggtcctcag atcggcttcc tgcaggaggc gctgcggtgg tgggatcaat ggctaaaagg
     1381 caaagacacc ggcgtgatgg atgagccgat gctgcgggcc tggatgacgg agagcgtgcc
     1441 gcccgcgccc tttcaccgcg cgttgcccgg acgatgggtc gccgaaacga catggccgcc
     1501 gcccggggtt gttccgcatc gtctgcacct cgccgatgct ggcctgcaaa ccaccgacac
     1561 cgggttgacg ccgcgtgcag tgtgctcgcc gctgacaatc ggcaaggatg gcggaagctg
     1621 gtgcccattc ggcagcgctc ccgatcaggc cggcgatcag caggacgatg acgcaatgtc
     1681 gctgctgttc gagactgcgc ctctcgcgac acggatggag accctcggcg ccgcagtcgt
     1741 cgtgctcgat gtcgcgtccg acaagaagct ggcaaacctg gcggtgcgat tgtgcgacgt
     1801 gcacccggat ggagcgtcat tacggatcag ctacgggatc ctgaaccttg catatcgcga
     1861 cagttacgaa tcgcctgcac ttttacaacc tgggcttcgc tatcggatcc gcatccaact
     1921 caatgatgcg ggctcggtgt ttcctgccgg ccatcggatc agactggcac tgtccacgaa
     1981 ctactggccg atgatctggc ccacccccga tcgtccgacc gtgacggtgt tcagcggcac
     2041 agtcgagctt ccgatccgac cggtaaaccc ctctgatgca ctgctgccgg ccctgccgga
     2101 accagaaacc gcgacgccgg aaccgaccac tcaaacgcag caaggcggtg tgcggattga
     2161 ccggctgggg cttgaacttt ccaccgacgg cgacttccgg actcacatgg aaccggatga
     2221 tccactcagc gctgtcgtcg agatgcgtca gtcgcagacc gtgtctcgcg gcagttggcg
     2281 cacaaggttc gagaccacga cccgcatatc ctgcacgcgc aatacattca atctgcacgc
     2341 gacgatgtgc gcctgggagg gcgaggtgga agtttgccgt cgcacgtggg acaccagcgt
     2401 gccgcgcgaa ttcatctagg ttcgcacaag caacgacaca gctgcctcat ccatcgcccg
     2461 ctgcgccaac cagccttcca ttagcttgcc gccaccggtc ggaaacgttt cgtccagcag
     2521 tgtcgaggtt acgatccgtt cgacccggaa atgccggtaa tcctggcgca actcgcacca
     2581 cgccccgatc agcgtggcgt ctacgtaata cgccatggcg atcggccaga tcgtgcgatt
     2641 gctgcgttgc cctcgcgcgt cggtgtaggt gacgcgcatc ttcctggttt cgcggatcgc
     2701 gtaacgaacg tcggaaaggt cgatcccggt tggcgtttcg gcctgaccgg cggacacata
     2761 aaacggagcg tcaacgactc catggcgcaa cgtttccggc aaaattgtcg tgatttttgc
     2821 cagcacgctg tccgccgcgt cttgcagccc aggatcgcgg aggcggcgaa cgaggcgggc
     2881 gccaacggtg atcgcatcga gttcgtcggc ggtgaacatc aacggtggaa gatcaaagcc
     2941 gcgccgcaga acatagccga tgccggccgc gccctcgatc ggtacgcggc ttgcctgcaa
     3001 ggcggcgata tcgcgataga cggtgcggac ggtaacctcc aattgctcgg cgagagtcgc
     3061 ggccgtcagc ggtttggtgg cgactcgcaa ggtctgaatg atgtcgaaca gccgatctgc
     3121 ccgccgcatg ggtggctccc gcggatgtga agtgtctcct gacataacgc tgtcaggagg
     3181 gtggcgctag tgtccatcgc tccctcactc gccccccaga ggccagcgat catgtcgata
     3241 tcgcatcttt caaccgcgtc ggcgcgccgg gacctcaaaa gccggatcgc cgcatccgag
     3301 accgagtttc gccgcggctg gccggctgtc ctggcctgtt tctgcgtggc tgtgttcgcc
     3361 tggggcttcg gcttctacgg ccaggcggtc ttcctggccg agttgcaccg cacgcatggt
     3421 tggccgacct ccaccatcgg tgccgccacg acagtgtttt atctgtgcgg cgctctgctg
     3481 atgccgttca tccagcagac cctcgaccgc accggggcac gctcgttgct gatcggcggc
     3541 gtgttgcttc tgggcctggg tgccgccggc ttcagcaacg ccgcccaacc ctggcaactg
     3601 tttgtcgccg gagtggtcat ggcagcggga tgggcagcgt cctccggccc ggccatcgcg
     3661 acaatcctgg cgctgtggtt cgatcgccgg cgcgggttcg cgatcagcct ggcgttgaac
     3721 ggcgccagcg cgagcggctt caccatcgcg ccactcctgg tgcacctgag ccaaacgatc
     3781 ggattgcagc gagcggtggt ggagaccgtg ctggccggct ggatcattct gattccgatc
     3841 gttttgtact gcgcacgacc cggtactgct gcactgccgt cggttattat gccgacgcgc
     3901 accggcccgg acgggcgcag cgatacgttg cgcagttggc acttttggtc ggtcgccttg
     3961 ccattcgcgt tggcgatcgc ggctcaggtc gggttcatcg tgcatatggt ggcatatttg
     4021 ctgccgttgc tcggtgctgc cggcaccgga gcggcagtga tgtgttccag tcttgcggcg
     4081 atggtgggac gactcgggct gggtgcggtg atcgatcggt tgccgcggcg agccacgacg
     4141 gcggtgtgct tcgccagcca ggcgtgcggg ctgggactgc tgctggccat gccggactcg
     4201 gctgccgcga cctatctggg cattgcgttg tttgggctct cggtcggcaa tgtcattacg
     4261 ctgccggcgg tgatcgtgca cgcggagttc agcgccgcat cgttcggcct gatcatcggg
     4321 ttgagcggag caatcactca gttcgcgctg gccctggcac caggggcgtt cggaatgttg
     4381 cacgatctga caggcaatta tgacgcggtg ctgctggtct gtatcggctt gcagttggtg
     4441 ggtgccggac tggtactttg tcgccgacgc ggcggttcaa tcgccggccc ggggttgcgc
     4501 cgacgctcgc ggcgcagtgc gtaaggcgag gatggctatg gccgaaacaa acgcacagca
     4561 agcgatgtaa tacagtccgc ctgagaaact gtttgtcgtg gtcttgagcc aaccaatcac
     4621 caccggaccg atgatgccgc cgaagttggc aaaaacgctg atcaacgcca tcacggctgc
     4681 caacgccgcg ccgctcagga acaacggcgg gacggtccag aacattgggc gggcgatgcc
     4741 gatgccgatc tcgaccagcg tgacagcgat caaagcccag gcggaggttg cgtagatccc
     4801 catgccggtc caaccgatcg cgcacaggat catcagcgcc gacagcatcg gacgcttatc
     4861 ctcaatccgg tcggcgaaaa cgttgccggc gatcatggca aaaatgccga caatcgaggg
     4921 cacggcgacg atccagccaa cctggaaatt gctgacgccc cagcctttga cgatcagcgg
     4981 caggaagtag cccatggaat acgaaatcgt gccgaaagcg aaatagacga agcagagcag
     5041 catggcgcgg gggtcggtga ggcctttccg gacgctgagt tgactgtgga cggcttcgac
     5101 ggaggcgcgt tcacgggcca tcgtttcctc aagccaggcg cggttctcgg gtgggagcca
     5161 ggcggcgttg gcgggccggt cggtcaacag gcggagcacg acgaagccga gcaagatggt
     5221 cgggatgccc tccagcagga acagccattt ccagccggtt atgccgaaaa gaccgttgag
     5281 ttcgagcagg ctggtggcga ttggtccgcc gatggcgctc gaggcgggga tcgccagcac
     5341 cagagcgacg ttgacccggg cgcggtaggc gcgggggaac cagtaggtga gatagagcag
     5401 catgccgggg aacaaccccg cctcagcggc gccaagcagg aagcgaacca gcaggaaact
     5461 gggctgaccg gagaccagcg ccatggcgga ggcggtgagg ccccaggtaa tggcgatgcg
     5521 cccaatccac cgccgcgcgc cgatccgttc caggatcaga ttactgggca cctcgcaagg
     5581 gatgtagccg aagaagaagg cggcaacgcc cagggagtag gtgtacgggg taaggccgag
     5641 gtccttgttc atggtgagcg cggcaaagcc gaggttcact cggtcgatga ggctgagcag
     5701 gtagagcagg aagacgagcg gcagcagacg ccacgcgacg gtgcggatgg tcgcgcgttc
     5761 gaggtcgtga ggcacttgtt tctcccggtt tggccggtcc cgttgggcgg gatggctggc
     5821 ccgtcagtcg tggctgacgg tttgtattgg cgtggttagc gaacgccgcg ttgtgtggga
     5881 agtaaacacc gttctgacgc attgagaagg ccgacgcctg gccggcgcgg gtcagtggca
     5941 aatggaagat cgatccggct ggctgacgag gagagtgacg gccgatcgag cgctaccata
     6001 acggattcgt gatcaaatcg atcgatacgg tagtgtccac aatcagtgga tcgtgagtcg
     6061 caattcccct ttcgtcatca ccgtgcttgt cacggtgtcc aacatcagca cttt
//
LOCUS       DATAVD010000299         2742 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2635428, whole genome shotgun sequence.
ACCESSION   DATAVD010000299 DATAVD010000000
VERSION     DATAVD010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2742
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2635428"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..378)
                     /locus_tag="VHX39_05480"
     CDS             complement(<1..378)
                     /locus_tag="VHX39_05480"
                     /inference="COORDINATES: protein motif:HMM:NF014668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RecX family transcriptional regulator"
                     /protein_id="HEX3990605.1"
                     /translation="MSLGNPSRPHDLPIRPAPDAASLHEAALNYIARYATTEAGLRQV
                     LQRRIEAWVRQAGAEDDVRDLAAAAKAAIAGVIARLVELGLLNDATFAENRARGLALS
                     GRSHRAITARLMAKGIDPERARAV"
     gene            560..1756
                     /locus_tag="VHX39_05485"
     CDS             560..1756
                     /locus_tag="VHX39_05485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEX3990606.1"
                     /translation="MIPALLPNYARADLAFERGEGAWLWTVDGRRLLDFGSGIATASL
                     GHGHPHLVKAIAEQAAKVMHTSNLYRIPQAERLAARLVEATFADSVFFCNSGAEANEG
                     MIKMMRRAMYDAGKPERFRFICFEGAFHGRTLATLAATGNEHYLHGFGPVVEGFDHVP
                     FGNMNAVRDKIGPGTCGIIVEPIQGEGGVRAPDPQFLRDLRAVCDEYDIILGMDEVQS
                     GMGRTGKLFAHEWSGITPDVMSSAKGIGGGFPLGAVLAKERFAKALVPGTHGTTYGGN
                     PLACAAGNAVLDVLLAPGFLVEVDRKGRKLGADLDKIAAEFPTVFVDARGMGLLRGLK
                     CAMPQGDVQRACVAEGLMAITAGENVLRLAPPLVVTDEDLDQAMVMLRRAAANCAGSA
                     AKAAAQ"
     gene            1753..2709
                     /gene="argF"
                     /locus_tag="VHX39_05490"
     CDS             1753..2709
                     /gene="argF"
                     /locus_tag="VHX39_05490"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEX3990607.1"
                     /translation="MSASARRPRRSTSDATSPRHFLDLRDFDTATLRQMLDVAANYKK
                     AAGVSSRPLAGKTLALIFEKPSTRTRVSFEVGMRQLGGEVIFLSAADMQSSRGESPAD
                     TARVLSRYVDAIVMRTSHVAKIRELASFATVPVINGLTDLSHPCQLMADVLTFEEHRG
                     PIAGQVVAWCGDGNNVARSWIEAAVRFGFILRLATPDALRPPAELIEWARAQGGKIEL
                     TDDPLAAVKDARCVVTDTWVSMSDDPNSNRHNMLAPYQVTSALMAQAAGDAIFMHCLP
                     AHRGEEVTGDVIDGPQSVVFDEAENRLHAQKGVLAWVLGVAR"
BASE COUNT          467 a          833 c          939 g          503 t
ORIGIN      
        1 caccgcgcgg gcccgttccg gatcgatccc cttggccatc aaccgcgccg tgattgcgcg
       61 gtgcgagcgt ccgctcagcg ccaggccacg cgcccggttc tcagcaaacg tcgcgtcatt
      121 cagcaaaccg agttcaacca ggcgtgcgat caccccggca atggcggcct ttgcagccgc
      181 cgcgagatca cgcacgtcat cctcggcgcc ggcctgacgc acccacgcct cgatgcggcg
      241 ctgcaaaacc tgacgcaggc cggcctccgt cgtcgcgtag cgggcgatat agttcagcgc
      301 ggcctcgtgc aacgacgccg catccggtgc cggccggatc ggcagatcgt gcgggcgcga
      361 cggattaccg agggacatgg cacaacgatg ccacggcgga ccgggcaggc aaactgccgg
      421 tggaccgctc actgtccagc cgcgggtacg tttgactttt ccgggcatgc tggcgaaaga
      481 tgtttgcttc cgtggagccc gccccgaatg gtcgcgggtg ggtggcccat tggaagcaac
      541 gcaacaatgg tcaaatgtca tgatcccggc tctgttaccg aactacgcac gtgccgacct
      601 cgccttcgag cggggcgagg gcgcctggct gtggacggtc gacggacgac gacttttgga
      661 tttcggatcg ggcattgcca ccgcttcttt gggacacggc catccgcatc tggtcaaggc
      721 gatcgccgag caggctgcca aggtgatgca cacctccaac ctgtatcgca ttccgcaggc
      781 ggaacgtctg gcggcacggt tggtcgaggc gacgtttgcc gacagcgtgt tcttctgcaa
      841 ctcgggcgcc gaggcgaacg agggcatgat caaaatgatg cgccgcgcca tgtacgatgc
      901 cggtaagccg gagcgcttcc ggttcatttg cttcgaggga gcgttccacg gccgcacgct
      961 ggcaaccctc gccgccaccg gcaatgaaca ttatttgcat ggcttcggac cggtcgtgga
     1021 aggattcgac cacgttccgt ttggcaacat gaacgcggtg cgcgacaaaa tcggtccggg
     1081 cacctgcggc atcatcgtcg agccgatcca gggcgaaggc ggcgtgcgcg cgcctgatcc
     1141 gcagttcctg cgcgatctgc gcgcggtttg cgatgagtac gacattatcc tcgggatgga
     1201 tgaggtgcag tcgggaatgg ggcgcaccgg caagttgttc gcccatgaat ggtccggcat
     1261 cacaccggat gttatgtctt cggcgaaagg gatcggcggc ggtttcccgc tcggtgccgt
     1321 tcttgccaag gaacgtttcg ccaaggcgct ggtgcccggc acgcacggca cgacgtacgg
     1381 cggcaacccg ttggcctgtg cggctggcaa tgccgtgctc gatgtgttgc tggctcccgg
     1441 cttcctcgtc gaggtcgatc ggaaaggccg caaactgggt gccgacctgg acaaaatcgc
     1501 tgcggaattc cccacggtgt tcgttgatgc ccgtggcatg ggcctgttgc gcggcctgaa
     1561 atgcgccatg ccgcagggcg acgtgcagcg cgcctgtgtt gccgagggac tgatggcgat
     1621 caccgccggt gaaaatgtgc tgcgtttggc accgccgctg gtggtgacag atgaggacct
     1681 cgaccaggcg atggtcatgc tgcgccgtgc ggcagccaac tgcgccggca gtgctgccaa
     1741 ggctgcggcg cagtgagcgc gtcggctcgg cggcccaggc ggtcgacgtc ggacgctacc
     1801 agtccgcggc acttcctgga tttgcgcgat ttcgacaccg cgacgttacg gcaaatgctg
     1861 gacgtcgcgg cgaactacaa gaaagcggcg ggcgtttcgt cgcggccact ggcgggcaag
     1921 acgctggcgc tgatcttcga aaagccctca acgcgcaccc gcgtgtcctt cgaagtcggt
     1981 atgcggcaac tgggtggcga ggtcatcttc ctgagcgccg ccgatatgca gagcagccgc
     2041 ggggaaagcc cggcggatac cgcccgcgtg ttgtcccgtt atgtcgacgc gatcgtgatg
     2101 cgcaccagcc atgtggcgaa gatccgcgaa ctggcgagct ttgcgacagt gccggtgatc
     2161 aacggcctga ccgacctgtc gcacccctgc cagttgatgg cagatgtgct gacatttgaa
     2221 gagcaccgcg gcccgatcgc cggtcaggtg gtggcgtggt gcggcgacgg caacaatgtc
     2281 gcgcgcagtt ggatcgaggc agcggtgcgg ttcggtttta tcctgcgcct cgcaacgccc
     2341 gatgcgctgc gtccgccggc tgagctgatc gagtgggcgc gcgcccaggg tgggaagatt
     2401 gaattgacgg acgacccgtt ggcagcggtg aaggatgcgc ggtgcgtggt gaccgacacc
     2461 tgggtgtcga tgtcggacga tccgaactcg aaccggcaca atatgctggc accgtatcag
     2521 gtcaccagtg cgttgatggc gcaggcggcc ggggatgcga ttttcatgca ctgcctgccg
     2581 gcgcatcgcg gcgaagaagt gaccggggac gtcatcgacg gcccgcaatc ggtggtgttc
     2641 gatgaggccg agaaccggtt gcacgcgcag aagggtgtgc tggcgtgggt actgggggtg
     2701 gcgcggtagc tattttttct ccaattattt gggcttctga cc
//
LOCUS       DATAVD010000300         1699 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_774029, whole genome shotgun sequence.
ACCESSION   DATAVD010000300 DATAVD010000000
VERSION     DATAVD010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_774029"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1699
                     /locus_tag="VHX39_05495"
     CDS             <1..>1699
                     /locus_tag="VHX39_05495"
                     /inference="COORDINATES: protein motif:HMM:NF012861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEX3990608.1"
                     /translation="FTWLATGKSEFGQGGYVASTHLPWLGLAFYVIIPIIGGLLYGPL
                     VYRFAREARGHGVPEVMVAVAENGGRIRPQVAAVKALASALTIASGGSVGREGPIVQI
                     GSALASGLGQWVRMPENRMRILVACGAGGGIAATFNAPITGVFFGVEIILREFSVEAM
                     FAVMLSAMVADAVAIPFLGDHAFLTGFPSGIALHNPTDYLLVAVLAVVAALIGLLFKS
                     ALYKIEDLWDLIWKKRPEWARPAVGGLVLGLLLLALPQMYGVGYPVMFKAIAGNYALW
                     FLLILMLGKILATSLTLGIGGSGGIFAPSLFIGVTSGMAFGLTADHLFGPAAGNPALY
                     AAVAMGAVFTSAARAPLTSLASVVEMTGDFTLTLPVMLAVGIATAVSRGISYGTIYTT
                     KLLRRGQDIDRAAPWRVFSDLTAEQAMKPFARPLDLTLGRRSTPQEQEQPNSLPGQVR
                     LIREPQAVFATESLADVLRQLQVYGRDGLPVLSEDGRHVDGWVTNQSVLDTVTQELGR
                     RPPRRAVTPIGKDRSAAEQSDIGRPATPLTGFQIAEVTIMPSSAEVGRTLGEFPWPRG
                     "
BASE COUNT          278 a          595 c          503 g          323 t
ORIGIN      
        1 ttcacttggc ttgccaccgg taagtccgag ttcgggcaag gcggatacgt tgccagtacg
       61 cacctgccgt ggctgggatt ggccttctac gtcatcattc ctatcatcgg tggcctcctt
      121 tacgggcctc tggtttaccg cttcgcgcgg gaggcgcgcg gccacggcgt accggaggta
      181 atggtcgccg tcgccgagaa cggcggacgc atccgacccc aggtcgccgc ggtcaaagcc
      241 ctcgcctccg ccctgacgat tgcttcaggg ggatcggtcg gccgcgaagg acccatcgtg
      301 caaatcggat ccgcactggc gtcaggactg ggacagtggg tccggatgcc cgagaaccgg
      361 atgcgcatcc tggttgcgtg cggcgccggc ggaggcattg ccgccacctt caacgcgccc
      421 atcaccggag tctttttcgg agtcgaaatc atcctgcggg agttctccgt cgaggcgatg
      481 ttcgcggtca tgctctccgc aatggtcgcc gacgcggtag cgatcccgtt cctcggcgac
      541 cacgctttcc tgaccggatt tccctccggc atcgcccttc acaaccccac cgactacctg
      601 ctcgttgccg tactcgctgt cgtcgccgcc ctcatcggtc tcctgttcaa gagcgcgctc
      661 tacaagatag aagacctgtg ggacctcatc tggaagaagc gcccagagtg ggctcgcccc
      721 gcagtgggcg gcctcgtcct cggcctcctg cttctggcgc tgccgcaaat gtacggggtc
      781 ggctatccgg tcatgttcaa agccatcgcc ggcaactacg cgctctggtt cctcttgatc
      841 ctcatgctcg ggaagattct ggccacgagt cttaccctcg gcatcggagg ttccggcgga
      901 atcttcgccc catccctctt tatcggggtc acctcaggca tggcattcgg gttgaccgcc
      961 gaccacctgt tcgggccagc tgcgggcaac cccgcgcttt acgccgccgt tgcaatgggc
     1021 gccgttttca cctccgccgc acgggcaccg ctcacatcgc ttgccagcgt cgtcgaaatg
     1081 acgggcgact ttacccttac gctgccggtg atgctcgccg tcggtatcgc gaccgcggtc
     1141 tcacggggca tcagttatgg aaccatctat acgaccaaac tcctccgtcg cggacaggac
     1201 atcgaccgcg ccgcaccgtg gcgggtgttc tccgacctca ccgccgagca ggcaatgaaa
     1261 ccgttcgctc gcccgctgga cctcaccctc ggccgccgaa gtacccccca ggagcaagag
     1321 cagcccaaca gtcttccggg gcaggtgcgg ctaattcgcg aaccccaggc cgtattcgcc
     1381 accgaatccc tcgccgacgt cttacgacag ctgcaggtct atgggcgcga cgggctcccg
     1441 gtgttgtccg aagatgggcg ccacgtcgac ggctgggtca ccaaccagtc cgtactcgac
     1501 acggtcaccc aagaactcgg ccgacgaccg ccgcgccggg cagtcacgcc catcggcaaa
     1561 gaccgatccg ctgccgagca gtcggacatc gggcgaccgg caacacctct gaccggcttc
     1621 cagatcgccg aggtcacaat catgcccagt tcggctgaag taggtcggac gttgggtgag
     1681 tttccctggc cgcgcgggc
//
LOCUS       DATAVD010000301         1518 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2819344, whole genome shotgun sequence.
ACCESSION   DATAVD010000301 DATAVD010000000
VERSION     DATAVD010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2819344"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..265
                     /locus_tag="VHX39_05500"
     CDS             <1..265
                     /locus_tag="VHX39_05500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990609.1"
                     /translation="VWGGKTPQIDLREAEALGFKLAIVPGLLLKAAIGACDAALAALK
                     ETHIHPAPRDGMTVRAAFDRVGATEWDAFRTKFRAPEAKRAAE"
     gene            294..1253
                     /locus_tag="VHX39_05505"
     CDS             294..1253
                     /locus_tag="VHX39_05505"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-alpha-hydroxyglycine alpha-amidating
                     lyase family protein"
                     /protein_id="HEX3990610.1"
                     /translation="MVTLGSGDYTYEPVENWAKLPPGWTFKEIGGVGVDSKDNVYVFN
                     RGEHPMIVFDRDGNFLRSWGEGGMFPRAHGVFVAPDETLWLTDDGDHTVRQCTTEGKV
                     LLTLGTSGKPAPYMSGEPFHRCTHTAMAPNGDLYISDGYGNSRVHKYSPDGKLIMSWG
                     GPGTDPGEFNIVHNITCDADGWVYVADRENHRVQVFDGNGKYETQWNNLFRPCGLFMP
                     PGKCPICYIGELGPVQPVNRDMPNLGPRVTIVDNTGKRLARLGGLHAGLGPDQFMAPH
                     GLTVDQHGDIYVGEVSWTNWPQSFPDKPRPDNLRSLQKFRRIK"
     gene            1270..>1518
                     /locus_tag="VHX39_05510"
     CDS             1270..>1518
                     /locus_tag="VHX39_05510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase"
                     /protein_id="HEX3990611.1"
                     /translation="MTDAVSAALPSDAASATLAGRVWRPDRNGPSVVAIRDGAVFDIS
                     AVSPTMRDLCETEDPAARVRTTQGEPLGSLAALLANTPP"
BASE COUNT          315 a          490 c          449 g          264 t
ORIGIN      
        1 cgtttggggt ggcaaaacgc cacaaatcga tctgcgtgaa gcggaggcct tgggctttaa
       61 gctggcgatc gtgcctgggc tcttgctgaa ggctgccatc ggcgcctgcg acgccgcgct
      121 ggcagcgctg aaagaaaccc acattcatcc cgccccacgc gacggcatga cggttcgcgc
      181 cgcgttcgac cgggtcggtg ccaccgaatg ggacgcattt cgcacaaaat tccgcgcccc
      241 tgaagcaaag cgcgccgcgg aataacaccg aaaaaatacc ggaggatccc atcatggtca
      301 cccttggcag tggcgactac acctacgaac ccgttgaaaa ctgggcgaaa ttgcctccgg
      361 gttggacgtt caaggaaatc ggcggcgtcg gcgtcgactc gaaagacaac gtctacgtct
      421 ttaatcgcgg cgagcatccg atgatcgtgt tcgaccgcga cggcaacttc ctgcgttcct
      481 ggggtgaggg cggcatgttc cctcgcgcgc acggcgtatt tgttgcgcct gacgaaacat
      541 tgtggctgac cgacgacggc gatcacaccg ttcggcaatg cacaaccgaa ggcaaggtgc
      601 tgctcaccct gggcacctcc ggcaaacccg cgccctatat gagcggcgaa ccgttccacc
      661 gctgcaccca taccgccatg gcgccgaatg gcgatctgta catctcagac ggctacggca
      721 attcccgggt gcacaaatac tcgcccgacg gcaaactgat catgtcatgg ggcgggcccg
      781 gcaccgaccc gggtgagttc aacatcgtgc acaacatcac ctgcgatgcc gacggctggg
      841 tttacgttgc cgaccgtgaa aaccatcgcg ttcaggtgtt cgacggcaac ggcaaatacg
      901 aaacccaatg gaacaatctg ttccgtccct gtggcctgtt catgccgccc ggcaaatgcc
      961 cgatctgcta catcggagaa ctcggacctg tgcaaccagt gaaccgggac atgccgaacc
     1021 ttgggcctcg cgtcaccatc gtcgacaaca ccggcaagcg gctcgcgcga ctgggcgggc
     1081 tgcacgccgg cctcggaccg gatcagttta tggcgccgca cggcctgacc gtcgaccagc
     1141 atggcgacat ttatgtcggc gaggtttcct ggaccaattg gccgcaaagc tttccggaca
     1201 agccgcggcc ggacaatctg cgatcgttac aaaagtttcg gcgcatcaaa tgaacgcggg
     1261 aaccacgcca tgaccgatgc ggtaagcgcg gcactcccct cggacgccgc gagcgcgacg
     1321 ttggccggac gcgtctggcg gcctgaccgc aacggtccct cggtagtggc gatccgcgac
     1381 ggtgcagtat tcgacatttc cgccgtcagc ccgaccatgc gtgatttgtg tgaaactgaa
     1441 gaccccgccg cgcgcgtgcg tacaacgcaa ggtgaaccgc ttggcagcct ggcagcctta
     1501 ttggccaaca cgccgccg
//
LOCUS       DATAVD010000302         2704 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3566708, whole genome shotgun sequence.
ACCESSION   DATAVD010000302 DATAVD010000000
VERSION     DATAVD010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2704
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3566708"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1266
                     /locus_tag="VHX39_05515"
     CDS             <1..1266
                     /locus_tag="VHX39_05515"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX3990612.1"
                     /translation="NDSNPILDDQADQQTELSNDDAAAAIQQFSNELAVEQQDVRNRM
                     TLEALNQIAAYVAGIKGRKNLVWFTDGMPINIFPSGGVNDLEGLTDYAKELRKTNDLL
                     TAAEVALYPVDARQLFSNLANGADQHLDRITVRTGAVQAANDQAFRNKKGGQLLGMEA
                     VAEETGGAAIYNTNDLKSAVAKAIQNGANYYTVSYVPPDLAYDGRYHTIDVEVDRPDV
                     HLAYRKGYNADDILHNAITPELSLATSAPEPYGNNMQASMGRGVPTASQVLFDVRVAP
                     STDPAKPTDAPVMGTLDPKLAGRPLVRYDVLYLVPARQITFTPGPGGTRKCSLAFDIA
                     AYDVYGKLITGLSQTISSPAMTAAQYQRFVQRPFQPLQQIDLPPGEIFLRVGVLDGGS
                     DKVGTLEIPLNVSKKLARPASPPGRKDGP"
     gene            1459..>2704
                     /locus_tag="VHX39_05520"
     CDS             1459..>2704
                     /locus_tag="VHX39_05520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990613.1"
                     /translation="MLFRKHIVSTRTLLQLTVATIFFVGGVGAAFAATSGAAPLLVPY
                     TINTIAGTPQFQANSAIIPTAGYFGENVPATTSLANPFNPGQTSYTATLDAPYDLAVD
                     SVGNVYITDTGNDIIREVNAQTGLITTIGGVIPKGCTGTSCTLRTPGCADGLPAAGNP
                     IGEHIQGIAVDAYGNIYFDDTTTQTVSVIYRSGTQVANFIKLEDPAGVSASAGTVQPG
                     YVYHVAGTYSASGCSGTKGAVDNVLASQGQLSGPEILSLDSAGNIYIGETGNATTRVI
                     NTQSTPQTFFQYTVQPGFIRSISDCNAALTIACPTGTVTPQGTAPQLNTGINGPVNAL
                     TFNSQFKNATVDAYGNLYQLNGTGSGTGPPGIYSATTYAGGPALTNLLTAEAPMLSGY
                     YGTTIGNAPNELSGAGGTSGLPT"
BASE COUNT          587 a          838 c          789 g          490 t
ORIGIN      
        1 aacgacagta accctatcct ggacgaccag gctgaccagc agacggaact gagcaacgac
       61 gacgccgcag ctgcgatcca gcagttttcc aacgagctgg cggtagagca gcaggacgtg
      121 cgcaatcgca tgacgctgga agcgctcaac cagattgcgg cgtatgtcgc gggcatcaag
      181 ggacgcaaga acctggtctg gttcaccgat gggatgccga tcaatatttt tcccagcggc
      241 ggtgtgaacg atctcgaggg cctgaccgac tatgccaagg agctgcgcaa gaccaacgac
      301 ctgctgaccg cggccgaggt ggcgttgtat ccggtagacg cgcggcagtt gttcagcaat
      361 ctggccaacg gcgccgatca acatcttgac cggattaccg tcaggaccgg cgcggtacag
      421 gcggcgaacg accaggcttt ccggaacaag aagggtggcc agttgctggg catggaggcg
      481 gtggccgagg aaaccggcgg cgccgccatc tacaacacca acgacttgaa gtcggcggtc
      541 gcgaaggcga tccagaacgg cgcgaattac tacaccgtgt cctatgttcc tccagacctg
      601 gcgtatgacg gccgctacca caccatcgat gtggaggtcg accgtccgga cgtccatctg
      661 gcctaccgca agggatacaa cgcggacgac attctgcaca atgcgatcac tccggagttg
      721 tcgctggcga cctcggctcc agagccttat gggaacaaca tgcaggcgtc catggggcga
      781 ggcgtgccca ccgcgagcca ggtgctgttc gacgtccgcg tggcgccgag cacggacccc
      841 gcgaagccca ccgacgcgcc ggtgatgggg acgctcgatc ccaaactcgc gggtaggcca
      901 ctggtgcgct acgacgtgct gtatcttgtc cccgcccggc aaatcacgtt tactccgggc
      961 ccgggcggga cccgcaaatg ttccctcgca ttcgatattg ccgcctatga tgtgtacggc
     1021 aagttgatca ctggtttgag ccagacaatc agttcgccgg caatgaccgc ggcgcagtac
     1081 caacgcttcg tgcagcgacc atttcagccc ttgcagcaga tcgacctgcc ccccggagag
     1141 atatttctcc gggtgggtgt tctcgacgga ggatcggaca aagtgggcac tttggagatc
     1201 ccgttgaacg tatcgaaaaa actggccagg ccggccagtc cacccgggag gaaagatggc
     1261 ccatagctcc ttctccccaa gaggcacagg gctttgaaga tttctcttgc aagtctttcc
     1321 agccaagacg tattatgccg cttatttttg gaaaccgttt ccgatgggaa atcagccagg
     1381 aaaacaactg gcggtcgggc gccttaccgc tcggccagcc ggaccgcaaa tgtactaatc
     1441 aaggatcagg tgacccagat gctctttcgt aaacacatcg tttcgacgcg aacgctcctc
     1501 caactgacgg tagccacaat ctttttcgtg ggcggagtag gagccgcatt tgccgcaacc
     1561 agcggtgcag cgccattgct ggttccgtac acgatcaata cgattgccgg gaccccccag
     1621 ttccaagcga actcggccat cattcctacg gcgggctact tcggagagaa cgtgccagcg
     1681 accacctcgc ttgccaatcc atttaatccg gggcaaacgt cgtatacggc gaccctcgac
     1741 gcgccctacg atttggccgt cgactcggtc gggaatgtct acatcactga caccgggaac
     1801 gacatcatcc gcgaggtgaa tgcccagacg ggcttgatca ccaccatcgg cggcgtcatc
     1861 ccgaagggct gcaccggcac cagttgcacg ctccggaccc cgggttgcgc ggacgggctt
     1921 cctgccgcgg ggaatccgat tggagagcat atccagggta ttgcggtcga tgcctacggc
     1981 aatatttatt tcgacgacac cacgacgcaa accgtctccg tgatctaccg ctctggtacg
     2041 caggtcgcga acttcatcaa gctcgaggat ccagccggag tgtcagcctc tgccggcacc
     2101 gtgcagcccg gctatgtcta tcacgttgcc ggcacgtaca gcgccagcgg ctgctcgggc
     2161 acgaaaggcg cggtagataa tgtattggcc tcgcaagggc agttgtcagg cccggaaatc
     2221 ctgagcctgg acagcgccgg aaatatctat atcggggaaa ccgggaacgc gaccacacgc
     2281 gtgatcaata ctcaatccac ccctcagacc ttcttccaat acacggtgca gccgggattt
     2341 atccggtcca tctcggactg caatgccgca ctcacgatcg cctgtccaac tggcacagtg
     2401 acgccccagg gcacagctcc ccagttgaat acaggcatca acggtccggt gaacgcactg
     2461 accttcaata gtcagttcaa gaacgccacg gtggatgcgt atggcaatct ctatcaacta
     2521 aacggaaccg gcagcggtac cgggccgccg ggaatctatt cggcgaccac gtatgcgggc
     2581 ggaccggcgt tgaccaatct gctcaccgcg gaggcgccga tgctgtcggg ttactacggc
     2641 acgaccatcg gaaacgcgcc gaacgagttg agcggcgccg gcgggacctc tggactgcct
     2701 acct
//
LOCUS       DATAVD010000303         3576 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2636278, whole genome shotgun sequence.
ACCESSION   DATAVD010000303 DATAVD010000000
VERSION     DATAVD010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3576
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2636278"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..260)
                     /locus_tag="VHX39_05525"
     CDS             complement(<1..260)
                     /locus_tag="VHX39_05525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ion channel"
                     /protein_id="HEX3990614.1"
                     /translation="MSRFDMRNPYHLAIALTSRQFIATLLTIYLLVNIAFATCFWLVP
                     GSVANARPHSFSDAFFFSIETLATVGYGWMYPMTPYGHVIAAT"
     gene            748..1128
                     /locus_tag="VHX39_05530"
     CDS             748..1128
                     /locus_tag="VHX39_05530"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX3990615.1"
                     /translation="MDKNDIRHALDRHWAASDANDFDIEHDIYRDDAVLEYPQSGERI
                     RGRHNIQASRTAQPNHKRFTVRRIVGAGDLWVTEFILTYDGQPSYTVSIMEFLNGKVS
                     RETQYFGDPFEPGPSRAQLVERID"
     gene            1174..1563
                     /locus_tag="VHX39_05535"
     CDS             1174..1563
                     /locus_tag="VHX39_05535"
                     /inference="COORDINATES: protein motif:HMM:NF019887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIB family hydrolase"
                     /protein_id="HEX3990616.1"
                     /translation="MHYPALATDYDGTIADDGVVDQPTLAALERLRDGARRLILVTGR
                     DLTSVQRIMPRLDICDLVVAENGALLTTSTKPHHVQENLKISALPEDAMQEIRDCIMT
                     NVRFNSVVSTGVPGFIPRTGHASSEVA"
     gene            1653..3317
                     /locus_tag="VHX39_05540"
     CDS             1653..3317
                     /locus_tag="VHX39_05540"
                     /EC_number="2.8.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC and FAD-binding oxidoreductase
                     domain-containing protein"
                     /protein_id="HEX3990617.1"
                     /translation="MTGRVIARRLNLDGDGQGDLRGHGGEQRAIMVYQLDSYRHWSDF
                     FGRSDLVNGNFGENLTVEGLADNEVCIGDRFRIGGAIVEVSQPRDTCYRVGIRLNHPG
                     IAALLVAHHRPGFYFRVITEGDIGAGDRVEKLSDGPERMTVAEIDGLLYSAEHPPEAL
                     RRAIRIPALSKDWQGSMQALLDAAEAGGKSGNAGLGLGASAPLAWRGFRPVVVVESRQ
                     ESADVRSFEIAAEDSSPLPSAQPGQYIMVRVTPGPDTAAVTRNYSLCGPPAKPIYRIG
                     VKNERGLASGFLHQSVRAGSRLEISAPRGSFTLAAGTTPVVLISAGVGVTPMLAMLHG
                     AAAGASRPVWWIHSARDRMHHSFAGEADDLLGALREARRCVIYSRPAPGDVIGQDFDR
                     SGHLSPDLLHELGVPQDAEFYLCGPPGFLEEIQKGLAARGVPWPRVHVEVFGGVTTLT
                     PGIAKGATALPHRPDGPEGNGPMVTFLRSGLAVRWDTRFGSLLDLAEACAVPVRWSCR
                     SGVCHNCESGLVEGELAYAPEPLDLPAEGNALICCSMPRTAVALDL"
     gene            3376..>3576
                     /locus_tag="VHX39_05545"
     CDS             3376..>3576
                     /locus_tag="VHX39_05545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3990618.1"
                     /translation="MTEYDAIIIGTGQSGPPLARRLASEGMKVAIIERGRFGGTCVNT
                     GCTPTKTLVASAYAAHVARRGAD"
BASE COUNT          720 a         1068 c         1109 g          679 t
ORIGIN      
        1 gtcgccgcga tgacatggcc gtacggcgtc atcggataca tccagccata gccgaccgtc
       61 gccagcgtct cgatgctgaa gaagaacgcg tccgagaaac tgtgtggcct tgcgttggcc
      121 accgaaccag gtaccaacca aaagcatgtg gcgaaggcaa tgttcaccag gagatagatc
      181 gtcagcaggg tggcgatgaa ttgtcgtgag gtcagtgcga tggcaaggtg ataagggttc
      241 cgcatatcga agcgagacac tcccttcttc ctgaaatcaa gagagccaag gtgaacccac
      301 gctgatttct cacgaggctt ccgccggagt ccaatgtgca acttgtgtcc ctttcgcagg
      361 actgactgga gtgcgaaagc cggatgcgag ctcgtgatgg acacgtaaga acgaccaggc
      421 aaccaacgaa tacccgcgac acggcataca ctctttcgca ccgcgataaa ctcgccagcc
      481 acactggcac gggatggcgc tgcaaagggc ggacgcggcg tgtcctttac cgcccctcga
      541 tgcggcaatt gggcgttcct tttcagaaat cccgttagtt cacgaaatac ccaagggcgc
      601 caaatatggc atttccagat ctcccaacgt ggatcgcggg attcgaacca tcagccccgc
      661 ccgccatggc ctccgccaag aaagtcgata gaaccgccca atggagcagg tatccacaag
      721 gcagacgttt ggaacaggaa caagaccatg gataagaatg acattcgaca cgcactcgac
      781 cgtcactggg ctgcatcgga cgcaaacgac ttcgatatcg agcacgacat atatcgcgat
      841 gatgcagtcc tcgaataccc gcaatccggt gagcgcatca ggggtcggca caacatccag
      901 gcctctcgca cagcgcagcc aaaccacaag cgtttcacgg tacgccggat cgttggcgcg
      961 ggcgacctct gggtcacgga attcatcctc acctatgacg gccagccatc ctacacggtg
     1021 agcatcatgg agtttctgaa cggcaaggta tcccgcgaaa cgcaatactt tggcgatcca
     1081 ttcgagccgg ggccttcgcg tgcgcaattg gttgagcgga tcgactgaca tccggtcggc
     1141 ggctttgtag ccagcactga aagggaaagg tgcatgcact atccggccct ggcgaccgat
     1201 tacgacggta ccatcgctga cgacggtgtt gtcgaccagc cgacgctcgc ggctttggaa
     1261 cgattgcgcg acggtgcgag gcgcctgatc ctggtcactg gtcgcgacct gaccagcgtg
     1321 cagcggatca tgccacggct ggacatctgc gatctcgtgg tcgctgaaaa cggtgcgctg
     1381 ctgaccacct ccaccaaacc gcaccacgtc caggaaaacc ttaagatatc tgccctgccg
     1441 gaggacgcca tgcaggaaat ccgagattgc atcatgacaa acgtccgatt caactcggtt
     1501 gtatcgaccg gtgtgcctgg cttcattccc cgcaccggtc acgcgtcatc cgaggttgca
     1561 taatgggtgt ggtcgtttcg gttaatgtcg gacttcctcg ggacattgcc tggcagagca
     1621 ggaccgttcg gactgcggtg tggaagacac cggtgactgg gcgggttatc gcccgacgtc
     1681 tgaatttgga tggcgacggc cagggcgacc tccgcggtca tggcggcgag caacgggcga
     1741 tcatggtgta ccagctcgat tcctatcggc attggtcgga cttttttggt cggtcggatc
     1801 tggtgaacgg aaatttcggc gagaacctca ccgttgaggg cctcgccgac aacgaagtgt
     1861 gcatcggcga tcgtttcagg atcggcggcg cgatcgtgga ggtcagtcag ccacgcgaca
     1921 cctgctatcg ggtcggcatc cggctaaacc atccggggat tgctgcgctg ctggttgcac
     1981 accaccggcc cggtttttac ttccgcgtca taacagaagg cgacatcggc gctggcgatc
     2041 gcgtcgaaaa actttccgac ggccccgagc gaatgaccgt cgctgagatc gatggcctcc
     2101 tatattccgc cgagcacccg cctgaagcgt tacgccgcgc catccgaatt ccggcactca
     2161 gcaaagattg gcaaggctcg atgcaggcgc tgctcgacgc ggccgaggcg gggggcaaat
     2221 cgggcaacgc cggtctcggg ttaggcgcat cggcgccgct tgcatggcgg gggtttcgcc
     2281 cggtcgtggt tgttgagtca cgtcaggaaa gcgcggacgt gagatcgttc gaaatcgccg
     2341 ccgaagacag ttcgccgcta ccgtcggcac agcccggtca atacatcatg gtgcgggtga
     2401 caccggggcc ggatactgcc gccgtcacgc gcaactattc gctgtgcggt ccgcccgcga
     2461 agcccatcta tcgcattggc gtcaagaatg agcgtggcct cgcgagcggg tttctgcacc
     2521 aaagcgtcag ggcgggaagt cgcctggaga tcagtgctcc tcgtggttcg ttcacgcttg
     2581 cggccggaac gacgcccgtg gtccttatca gcgccggtgt cggtgtcacg ccgatgttgg
     2641 cgatgttgca tggcgcggcc gccggagcgt cgcggccggt ttggtggata cattcagccc
     2701 gcgaccggat gcaccactcg tttgccgggg aggcggacga cctgcttggc gcgctccgcg
     2761 aggcccgtcg ttgcgtaatc tacagccgac cagcgccagg tgacgtgatc ggacaggact
     2821 tcgatcgatc gggtcatctt tcgcccgacc tgctccacga gctcggggtt ccgcaggacg
     2881 ccgagttcta tctgtgtggc ccgcccggat ttcttgagga aatccagaaa ggtctggcgg
     2941 cgcggggtgt gccctggccc agggtccacg ttgaggtgtt cgggggcgtg accactctga
     3001 cgccgggcat cgccaagggc gccacggcct tacctcatcg gcccgatggc ccggaaggca
     3061 acggacccat ggtgactttt ctgcgaagcg gtcttgccgt gcgctgggat acccgtttcg
     3121 gtagcctgct cgacctggcg gaagcctgtg ctgttccggt gcgttggtcc tgtcgatcag
     3181 gcgtgtgcca taactgcgag agtggcctgg tcgaaggcga actcgcctac gcgccagaac
     3241 cattggacct gccagccgaa ggcaacgcgc tgatctgctg ttccatgcca agaaccgccg
     3301 tcgcgctcga cctttagtcg gtgcggtagc gaaatacttg caaatggcag gcggctcacc
     3361 ggccaggagt ataaaatgac ggaatacgac gcaattatca tcggaaccgg gcaatccggg
     3421 ccacccctcg cgagacggct ggcgagtgaa gggatgaaag ttgccatcat cgagcgcgga
     3481 cgtttcggtg gcacctgcgt caataccggc tgtacaccga cgaaaacttt ggtcgccagt
     3541 gcgtatgccg cacatgtggc ccgccgcggc gcggac
//
LOCUS       DATAVD010000304         2532 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_959777, whole genome shotgun sequence.
ACCESSION   DATAVD010000304 DATAVD010000000
VERSION     DATAVD010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2532
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_959777"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..555
                     /locus_tag="VHX39_05550"
     CDS             <1..555
                     /locus_tag="VHX39_05550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3990619.1"
                     /translation="DIVVKSDNSVWFTDPAFGLLGYYEGEMHPQELPMCVYRIDGQSG
                     EVTMVADDVEGPNGLAFSPDESILYVVASRAQPNRLIRAFDVVGGTRLSNNRVFIDAG
                     PGSPDGFRVDIHGNLWCGWGMGEPALDGVRIFNSSAQPIGHIGLPERSANLCFGGRWR
                     NRLFMAASHGLYALYVNTQGAPGG"
     gene            complement(552..1211)
                     /locus_tag="VHX39_05555"
     CDS             complement(552..1211)
                     /locus_tag="VHX39_05555"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEX3990620.1"
                     /translation="MWEYDGHTFVSTAFGFVAQHPDWALIVAFLAAIIEAVAIIGTLL
                     PGTVIVMGVAGAAAAAGQPMLPFLAVAALGAVLGDYLSYWIGYRYRFVVRQWWPLAQR
                     PQLMAGADRFFKRYGAYSVALCRFSPVLRSTVPLVAGITGMSRGRFLIANVTSGLLWA
                     AVHIWPAQIAGLSIDRLRDGNWQTASLLGVGVLVCGVAFWALHRRVAPLITATKQSSR
                     P"
     gene            complement(1367..2290)
                     /locus_tag="VHX39_05560"
     CDS             complement(1367..2290)
                     /locus_tag="VHX39_05560"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: protein motif:HMM:NF005091.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HEX3990621.1"
                     /translation="MRIAVIGAGGVGGGFGAALAKAGADVTFVARGAHLAAMQQNGIR
                     VFGDRGETLVRPVQATDDPASIGPVDIVLFCVKLWDVESAGEQIKPLIGPDTAVIPLQ
                     NGIDASDRLAPILGASHVMAGTVSISATIASPGVIRQTGTFMSLAFGERDGRTTPRAG
                     AFRALCQTAGFDITLSADIAVPIWQKFVLLTAMSGGTAITRLSIGYLRDDPEVFSLFE
                     NVMRETEAVGRAEGVKLPATVVEDQIAMIRSTPPSGVASMAVDLSRGNRLELPWLAGK
                     VVALGRKHGIPTPANATIFAALKPYANGKPA"
     gene            2385..>2532
                     /locus_tag="VHX39_05565"
     CDS             2385..>2532
                     /locus_tag="VHX39_05565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3990622.1"
                     /translation="MEEVDCVVVGAGAVGLAVARALALAGREVIILEAAEGIGTETSS
                     RNSEV"
BASE COUNT          474 a          778 c          812 g          468 t
ORIGIN      
        1 gacatcgtgg tgaagtccga caactcggtg tggttcactg acccggcatt cggcttactc
       61 ggttattacg aaggtgagat gcatccgcag gaactgccaa tgtgcgtcta ccggatcgat
      121 ggccagagcg gcgaggtcac gatggtggcc gacgatgtcg aggggccgaa tggtctggca
      181 ttctcgcccg acgaatcgat cctttacgtt gtcgcgtcac gcgcgcagcc gaaccggctg
      241 atccgggcgt tcgatgtcgt tggcgggacc aggctgagca acaatcgggt gttcatcgat
      301 gctggtccgg gctcacccga tggattccgc gtcgacatcc acggcaatct gtggtgcggc
      361 tggggcatgg gggagcccgc cctcgatggt gtacggattt tcaattcttc ggcgcagccg
      421 attggccata tcggcctgcc ggagcggtcg gccaatttgt gtttcggtgg ccgttggcgg
      481 aatcgcctgt tcatggccgc cagccacggc ctgtatgcac tctatgtgaa cacgcagggt
      541 gctccggggg gctagggccg ggaggactgc ttcgttgcag tgatcaacgg cgccacccgc
      601 cgatgcaaag cccaaaaggc aacaccgcag accagcacgc caacgccgag caatgacgcg
      661 gtttgccagt tgccgtcgcg caaccggtcg atggacaggc cggcgatctg ggctggccag
      721 atgtggacgg ccgcccaaag caagcctgag gtgacgttcg caatcaaaaa ccgcccacgc
      781 gacatcccgg tgatcccggc taccagcggc accgtggagc gcagtactgg gctgaaccgg
      841 catagcgcca cgctataggc gccgtatcgt ttgaagaatc ggtccgctcc agccatcagc
      901 tgtggccgct gtgccaacgg ccaccactgc cggaccacga agcggtagcg gtagccgatc
      961 cagtacgaca ggtaatctcc cagcaccgcg ccaagcgccg ccactgcgag aaatggtaac
     1021 atcggctgac ccgcggcagc ggctgcaccc gcgacaccca tgacgatgac ggtgccggga
     1081 agcaatgtcc cgatgatcgc cacggcttcg ataatcgcag cgagaaacgc gacgatcagt
     1141 gcccaatcag gatgttgcgc gacaaatccg aaagcggtgg agacaaatgt gtggccgtcg
     1201 tattcccaca tggcgtgtgc ttccgagcgc tcctggcgca gcttccggtt aaaggcagac
     1261 cagggtaacg gactttgtca gcctatgatg catttccgtc cggttacatt cccactacgc
     1321 gcaacacgcc agggtgggtg ttttcgtccg cctgcgacgg ctggtatcac gccggtttgc
     1381 cattcgcgta aggcttcaac gcggcgaaaa tggtcgcatt cgctggggtc ggaatgccat
     1441 gtttgcggcc caacgcaaca actttgccgg cgagccaggg cagttccagg cggttcccgc
     1501 gcgacagatc gacggccatc gaggcgaccc cgctcggcgg tgtcgatctg atcattgcaa
     1561 tctggtcctc gacgacagtg gcgggcagct tgacgccctc cgcgcgaccg accgcctcgg
     1621 tctcgcgcat cacgttctca aacaatgaaa acacctcggg gtcgtcgcgc aggtagccaa
     1681 tcgacaggcg tgtgattgcc gtgccgccgc tcattgcagt gagcagcacg aatttctgcc
     1741 agatcggcac agcgatatcg gcgctgaggg tgatgtcgaa gccggcggtt tggcacagcg
     1801 cgcgaaatgc cccggcacgc ggtgtggtcc tgccatcgcg ttcgccgaac gccaacgaca
     1861 tgaacgtgcc cgtctgacgg atgacccctg ggcttgcgat cgtggcactg atggagaccg
     1921 tgccagccat gacatgcgat gccccgagga tcggtgccag ccggtcgctc gcgtcaatgc
     1981 cattttgcaa cgggatgacg gctgtatcag gaccgatcag gggtttgatc tgctcgcccg
     2041 cgctctcgac atcccagagc ttcacgcaga acagcacaat atccacagga ccgattgacg
     2101 ccgggtcatc ggttgcctgc accggacgaa ccagggtttc gccgcggtcg ccgaagacgc
     2161 gtattccgtt ctgttgcatg gcggccaaat gagcgccgcg cgccacgaat gtgacgtcgg
     2221 caccggcctt ggcgagggcc gcgccgaagc ctccaccgac gccgcccgcg ccgattaccg
     2281 cgatccgcat gactggactc ctgtttgctt gcagcttaac ccgttcgcca gttatcggcg
     2341 agtagctttg tcgaagttcg gcgtgcagcg aagagggttt gggcgtggag gaagtcgact
     2401 gcgtcgttgt tggtgccggg gctgtcggcc tggcggtggc tcgtgcgctg gccttggccg
     2461 gccgggaagt gatcatcctg gaggccgcgg agggcatcgg caccgaaacg tcttcccgca
     2521 acagcgaggt ta
//
LOCUS       DATAVD010000305         6122 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1890392, whole genome shotgun sequence.
ACCESSION   DATAVD010000305 DATAVD010000000
VERSION     DATAVD010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6122
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1890392"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..1305)
                     /locus_tag="VHX39_05570"
     CDS             complement(40..1305)
                     /locus_tag="VHX39_05570"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX3990623.1"
                     /translation="MLRRAKTTFLSGALLAASVLFAGAPAAQAANPITIGFGMALTGG
                     LAPNGKAALLAMQVWESDINAKGGLLGRPVKLVYYDDQSNPANIPALYTKLLDVDKVD
                     IAVSGYATNMVVPAIPIMMQQKRTFLGLLALDGNAEFHYPNYFSISPTGGPHPKQSFS
                     TGFFAVAKNLSPAPKTIAFVGADAEFSRNGLQGAHELAKEQGLKIVYDRTYPPSTTDY
                     TPIVRAIQASNPDLVFVASYPSDTVGILRAANEVGLKARLFGGGMVGLQATAIKTQMG
                     PLLNNVVDYDFWLPIGKFATPEALAFLKEYQAKAATAGVDLLGYYLPPFAYADMQVLQ
                     ASVEGTKSLDQQKLADYMRSHTFKTVAGDITFGANGEWTDARVMEVQFQNVKGHDVDQ
                     FKDPKVEVVLYPPDLKDGNVVTPYVGPKN"
     gene            1423..2325
                     /locus_tag="VHX39_05575"
     CDS             1423..2325
                     /locus_tag="VHX39_05575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0018576 - catechol 1,2-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0009712 - catechol-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HEX3990624.1"
                     /translation="MQDLDEFTVTDEALRQMAKTENPRLKEIMDSAVRHLHAFARDVN
                     LTPEEWLQGLQFLTAVGQACTPLRQEFILLADVLGLSAVVNALHDKKARELGSQSSLL
                     GPFFREGAPELPLGAQIVEKPTEPEIVVYGRVTDNDGSPLAGALIQIWQTSERGLYDM
                     QERNGESMDMRGNFRTDADGRYHFRTVRPLGYSIPMDGPVGAMVHLQNRHGFRPSHIH
                     CLIGADGYRELVTALYFGDDVNIDSDTVFGVSKALVVEAKDDPASPIPGLRAVHYDFR
                     LAKAAPGESGRVGADPTKLMKAAE"
     gene            2325..3113
                     /locus_tag="VHX39_05580"
     CDS             2325..3113
                     /locus_tag="VHX39_05580"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEX3990625.1"
                     /translation="MVRRIVDISSPLKAGIRSDPPHMLPQIEYSDHHKTAPAMAEYMG
                     VRVDQFPGGEYAAVETVQISTHNGTHMDAPYHFFSSMNHALKPGGEPSWRIDDVPLDW
                     CFQPGVKLDFRHLPDGYVATPGDVEAELKRIGHELRPLEIVVVNTAAGARYGEDDFVD
                     TGCGMGKAATMWLTERGVRVVGTDAWSWDAPFSFTREKVKTTGDVSLIWEGHRAGREI
                     GYFQMEKLGNLAQLPATGFDIVCFPVKVHRASAGWTRAVAIFND"
     gene            3229..3426
                     /locus_tag="VHX39_05585"
     CDS             3229..3426
                     /locus_tag="VHX39_05585"
                     /inference="COORDINATES: protein motif:HMM:NF012621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HEX3990626.1"
                     /translation="MTQFRIPDIHCDGCIRSLTGAVRDLDEHATLQVDLTTKLVRVET
                     TADNDAVAEAIRDAGFTVEPA"
     gene            complement(3450..4334)
                     /locus_tag="VHX39_05590"
     CDS             complement(3450..4334)
                     /locus_tag="VHX39_05590"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEX3990627.1"
                     /translation="MKLVLAEDADTAAAAITTADAAFGTLPSALLAKAQRLRWLQAPQ
                     AAPPAGYYYPELIAHSLAVTNFREIYNDHISAHIMAFVLAFARGLHVFIPQQLRRVWA
                     KPPEDHGVVPLPGSTALIVGLGGIGAETARLLAAFGVQVLAVDARRTDQPDDVAELHR
                     PDALDSLLPRADFVILTVPHTPATEGFFNRSKFRLMKPSAFFINIGRGMTTKLDDLVA
                     ALQAKEIAGAALDVYEQEPLPAEHPLWGMPNVLLTPHMAGYGPHLNERRFQIIEDNCR
                     AFAEGRPLRNVVDKATWF"
     gene            complement(4488..5192)
                     /locus_tag="VHX39_05595"
     CDS             complement(4488..5192)
                     /locus_tag="VHX39_05595"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX3990628.1"
                     /translation="MPPIVGNLPFPEVYQRTAVQLVEQEALVLRGERAGLEKDPAVRR
                     RMQNAADQAMATEVLRRSLAPNLTDKALLETYKALVANKPAPEEVDARLIMVDSREQA
                     DTLIQRLQGGADFSALARDYSKDGTAANGGELGYVRLDMLAPEIGSVMFALAPGQTTA
                     YPIRSHNAWFIVRVEGRREPPAPDFASARDALEQDIIHAGAPELMREAVKDAPVTYYG
                     QTGKKATGKKATDKTP"
     gene            5791..>6122
                     /locus_tag="VHX39_05600"
     CDS             5791..>6122
                     /locus_tag="VHX39_05600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990629.1"
                     /translation="MLQSICLGGLLIWLWRRDRGQPALASWGAGRLIGGFALPLLASR
                     GHIPTWGSLDVANGLVCLGYGLTWAGARQFEGLRARPVSVMAGVAVWLLACQVPGFVN
                     SLQARVTLL"
BASE COUNT         1044 a         1854 c         2053 g         1171 t
ORIGIN      
        1 cccgccgtcc gggcggcggg ggtgtcgatc agaaaaccgt cagttcttcg ggccgacgta
       61 aggcgtgacc acgtttccgt ccttcaggtc tggcggatac aggacgacct cgaccttggg
      121 atccttgaac tggtcgacgt cgtgcccttt cacgttctgg aactgcactt ccattacgcg
      181 ggcgtcggtc cactcaccat tggcaccgaa agtgatgtca ccggcgaccg tcttgaaggt
      241 gtgcgaccgc atgtaatcgg cgagtttttg ctgatccagg cttttggtgc cctcgacgga
      301 cgcctgcagt acctgcatgt cggcataggc gaagggcggc agataatagc caagcaaatc
      361 aaccccggct gtggcagcct tggcctggta ttccttgagg aaggccagcg cctcgggcgt
      421 tgcgaatttg ccgatcggca gccagaagtc ataatcgacg acgttgttca gcagcggccc
      481 catctgggtc ttgatggcgg tcgcctgcaa tccgaccatg ccgccaccga acagcctggc
      541 cttcaacccg acttcgttgg ccgcgcgcag gatgccgacc gtatccgacg ggtaggaggc
      601 gacgaacacc agatccgggt tgctggcctg gatcgccctt acgatcgggg tgtaatcggt
      661 ggtcgagggc ggataggtgc gatcgtagac gattttcagc ccttgctcct tagccagctc
      721 atgggcgcct tgcagcccat tgcgggagaa ttccgcgtcc gcgccgacaa atgcgatcgt
      781 cttgggtgcc gggctcagat tcttggcgac cgcaaagaaa cccgtggaga agctttgctt
      841 cggatgcggg ccgccggtcg ggctgatgga gaaatagttc gggtagtgga actccgcatt
      901 accgtcgagc gcgagcagac cgaggaaggt gcgcttctgc tgcatcatga tcgggatggc
      961 gggaaccacc atgttggttg cgtagccgct gacggctatg tcgactttgt cgacgtccag
     1021 cagcttcgtg tagagcgccg gaatgttggc ggggttggac tgatcgtcat aatacaccag
     1081 cttgaccggg cgcccgagca gcccaccctt ggcgttgatg tccgattccc agacttgcat
     1141 ggccagcagc gcggctttgc cgtttggtgc cagtccaccg gtcagcgcca tgccgaagcc
     1201 gatggtgatg gggttggcgg cctgtgccgc gggcgctccg gcgaacagga cactggcggc
     1261 gagcaatgca ccgctcaaaa aggtcgtctt ggcgcgtctc agcatgatct tcgtttcctc
     1321 cgggttgttt tattatcggt atcctacggc acggcaggcc actggcaaag tggccatgtt
     1381 tcgccatatg ctgccatcga gacgaccttt gggaggccta aaatgcagga cctggacgaa
     1441 ttcaccgtca ccgacgaagc gctgcggcag atggccaaga ccgagaaccc gcggctgaag
     1501 gagatcatgg actccgccgt gcgccacctc catgcctttg ccagggacgt caacctgaca
     1561 ccggaagaat ggctgcaagg cctccagttc ctgaccgccg tcggccaggc gtgtacgccg
     1621 ctgcggcagg agttcattct gctggccgat gtgctgggcc tgagcgccgt ggtcaatgcg
     1681 ctgcatgaca agaaagcccg tgaactgggc agccagagca gtctgcttgg tccgttcttc
     1741 cgcgaagggg cgccggagtt gccgttgggc gcacagatcg tggagaagcc gactgaacct
     1801 gagatcgtcg tctatggccg ggtcaccgac aatgacggct ccccgctggc cggcgcgctg
     1861 atccagattt ggcagaccag tgagcgcggg ctgtatgaca tgcaggagcg caacggcgag
     1921 agcatggaca tgcgcggcaa tttccgcacc gatgcggatg gtcggtatca cttccgcact
     1981 gtccggccgc tgggctactc gatcccgatg gacgggccgg ttggcgcgat ggtgcatctg
     2041 caaaaccgcc acggcttccg cccgtcgcat atccactgcc tgattggggc ggatggctac
     2101 cgcgagttgg tgaccgcatt gtatttcggc gatgacgtaa atatcgactc ggacaccgtg
     2161 ttcggcgtgt cgaaggcgct ggtggtggaa gccaaggacg atccggcctc gccgattccc
     2221 ggcctgcgcg cggtgcatta cgatttccgc ctggccaagg cggcgccggg tgagagcgga
     2281 cgtgtcggcg ccgatccgac caagctgatg aaggcggcgg aataatggtg cggcggatcg
     2341 tcgatatctc ctcgccgctg aaggcgggga tacgcagcga cccgccgcac atgctgccgc
     2401 agatcgaata ctcggaccac cacaagaccg ccccggcgat ggcggaatac atgggggtcc
     2461 gggtcgatca gttccccggc ggcgaatacg cggcggtcga gacggtgcag atcagcaccc
     2521 ataacggcac gcatatggat gcaccgtacc acttcttctc cagcatgaac catgcgttga
     2581 agccgggtgg ggaaccgtcc tggcggatcg acgacgtgcc gctggactgg tgttttcagc
     2641 ccggcgtgaa gctggatttc cggcacctgc cggacggcta cgtggcgact cccggtgatg
     2701 tcgaagcgga actgaagcgg atcgggcatg aattgcggcc gctggagatc gttgtcgtca
     2761 ataccgccgc gggtgctcgt tatggcgagg acgatttcgt cgataccgga tgcgggatgg
     2821 gcaaggctgc gaccatgtgg ctgaccgaac gcggagtgcg ggtggtcggg acggatgcgt
     2881 ggagctggga cgccccgttc tccttcaccc gcgagaaggt gaagacgacc ggggatgtga
     2941 gcctgatctg ggaaggccac cgcgcggggc gggagatcgg ctattttcag atggaaaagt
     3001 tggggaacct tgcccagtta ccggcgaccg ggttcgacat cgtgtgtttc ccggtgaaag
     3061 tgcatcgcgc ctcggcgggc tggacccgag ccgtggcgat tttcaacgac tgaggactgg
     3121 gcaccgactt ttctccatcg tgtcatggtt ttgctgcttc ccggctgacg gccggccatg
     3181 aggcgaggag agcggccggg ctttgtcccg taggcaggtc tctgattcat gacgcaattc
     3241 cgaattcccg atatccattg cgatggctgc attcgttcgc tcaccggcgc ggtgagagac
     3301 ctcgacgaac acgcgacctt gcaggtcgac ctgacgacca agctggtgcg tgtcgaaacc
     3361 accgccgaca acgacgcggt cgccgaggca atccgcgacg ccggcttcac cgtggagccg
     3421 gcgtaggtct cgggcgtcag gcggtcacgc taaaaccagg ttgccttgtc gaccacgttg
     3481 cgcagtggcc gcccctcggc gaacgcccgg cagttgtcct cgatgatctg aaaccgccgc
     3541 tcgttcaggt gcgggccgta tccggccatg tgcggcgtga gcagcacgtt cggcatgccc
     3601 cagagcggat gttccgccgg cagcggttcc tgctcataca catccagcgc ggcgccggcg
     3661 atctcctttg cctgcaacgc ggcgacaaga tcgtccagct tcgtcgtcat cccgcgcccg
     3721 atgttgatga agaacgcgct gggtttcatc aggcggaatt tcgagcgatt gaagaagccc
     3781 tcggtcgcgg gcgtgtgggg caccgtcaga atgacgaagt cagcccgggg aagcagggag
     3841 tccagtgcgt cgggtctgtg tagttccgcg acgtcgtccg gctgatcggt gcggcgggcg
     3901 tccacggcca ggacctgcac gccgaacgct gccagcaggc gggcggtctc ggcgccgatc
     3961 ccaccaagac cgacgatcaa cgcggtcgag ccgggcagcg gaaccacgcc atgatcctcg
     4021 ggcggcttcg cccaaacgcg gcgcaactgc tgggggatga agacgtgcag cccccgggcg
     4081 aaggccagaa cgaaggccat gatgtgggcg ctgatgtggt cgttgtagat ttcccggaaa
     4141 ttggtcaccg ccaaggaatg cgcgatcagt tcagggtagt agtagccggc gggaggtgca
     4201 gcctgcggtg cctgcagcca gcgcagccgc tgagccttcg cgagaagcgc tgatggcagc
     4261 gtaccgaacg cggcatccgc ggtcgttatg gccgcggcgg cggtgtcggc gtcttcggcg
     4321 agcaccagtt tcatgccggg gacggcatgc gccagccgag ctgcccattg gcgggtcagc
     4381 gcggtctgcg gcggcaacat caggaaggtg aattcgttgt tcatgggacg tctccgggct
     4441 ggtgccaggc ctgcgccgaa gcggcggcct ttccgcgcga tcatactcta cggcgtctta
     4501 tcggtcgcct tcttgccggt cgccttcttg ccagtctggc catagtaggt cacgggcgcg
     4561 tccttgaccg cctcgcgcat cagttccggt gcgccggcat gaatgatgtc ttgttccagc
     4621 gcatcccgcg ccgacgcaaa atcgggggcg ggcggctcac ggcgtccctc gacgcgcacg
     4681 atgaaccagg cgttatgact tctgatcgga taggccgtgg tctggcctgg cgcgagcgcg
     4741 aacatcaccg aaccgatctc cggggcgagc atatcaagcc tgacgtatcc gagttccccg
     4801 ccgttcgcgg cggtcccgtc cttgctgtaa tcccgcgcca gggcactgaa atccgcaccg
     4861 ccctgtagcc gctggatcag ggtgtcggcc tgttcgcgcg agtccaccat gatcagcctt
     4921 gcatccactt cctcgggggc gggcttgttg gcgaccaggg ccttgtatgt ttcaagcagg
     4981 gccttgtcgg tgagattggg ggcgagcgaa cggcgcagga cctcggttgc catggcctgg
     5041 tcggcggcat tctgcatccg ccgccgtaca gccgggtcct tctccagccc ggcgcgttcg
     5101 ccgcgcagta ccagggcttc ctgctcgacg agttgcaccg cggttcgctg gtacacctct
     5161 ggaaacggca ggttgccgac gatcggcggc aaggcgcgaa ttgcgtcggc gacgtcgccc
     5221 caggtgatcg tgtgcggtcc gacctccgcg acgacagtgt tcgcggaccg atcgagtacg
     5281 gccaaagcgg catccagcgc ggcgtcggat ctgatatccg gcggcgccag acctcccgga
     5341 ctcggggtgc cggtttgcgc gaccgccggt gttgccagcg cgaaggcggc gacggcgagg
     5401 agaggtcgaa tccttgagcg cgcgtgagcc aacagcaccg tctatacctc gatcgacttt
     5461 cggccatgcg tccccggacc ggctgatcct gtcgccggcc gatgtcacac cgggaggatc
     5521 gacccggctt tgcgcaacga gcgcgaaata ccctggaccg gcatgatgcc gcaagccacg
     5581 aagcggccgc tctgccaacg gcgaggttcg acgatccgaa gcgccggcgt gcccgaaccg
     5641 cttggcagcc atcccgcgca tgccccatct cggtgtaatg attttgacag atcatgtggt
     5701 acattcactg gggtcagacg tcgtgatcgt cctcatgggc cgtgtgccag aatgcttgcc
     5761 atccaccttc cgacgctctt cgcgttcacc atgctgcaat ccatctgcct cggtgggctg
     5821 ctgatctggc tgtggcggcg tgatcgcggc cagccggccc tggcaagttg gggggcgggg
     5881 cgtttgattg gcggtttcgc actgccgctg ctggcgtcac gcgggcacat tccgacatgg
     5941 ggttcgctcg atgtggcgaa cggtcttgtt tgcctgggtt acgggctgac atgggcgggg
     6001 gctcggcaat tcgaaggttt gcgtgccagg ccggtgtctg tcatggcagg tgtggcggtg
     6061 tggctgcttg cctgccaggt gccaggcttc gtcaacagcc ttcaggcgcg cgtaacactg
     6121 ct
//
LOCUS       DATAVD010000306         8042 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_214292, whole genome shotgun sequence.
ACCESSION   DATAVD010000306 DATAVD010000000
VERSION     DATAVD010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8042
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214292"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..496
                     /locus_tag="VHX39_05605"
     CDS             <1..496
                     /locus_tag="VHX39_05605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chlorophyllide reductase subunit Z"
                     /protein_id="HEX3990630.1"
                     /translation="AGVKPDNAAVRAALRAKPPLVLFGSYNERMYAAEMGNRSMYIPA
                     SFPGAIIRRATGTPYMGYAGATYIVQEFCNALFDALFNILPLGTDLDKVEPTPSRLNA
                     SCPWDDDARELFDDYLETEPFLVRISAAKRMRDRIEATIRQAGEDRVTAGRVVDALAE
                     RQLA"
     gene            635..865
                     /gene="pufB"
                     /locus_tag="VHX39_05610"
     CDS             635..865
                     /gene="pufB"
                     /locus_tag="VHX39_05610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030096 - plasma membrane-derived
                     thylakoid photosystem II [Evidence IEA];
                     GO_process: GO:0015979 - photosynthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="light-harvesting antenna LH1, beta subunit"
                     /protein_id="HEX3990631.1"
                     /translation="MALTPGGPSLTGLTEAEAKEFHGIFITSFIVFTVIAIIAHFLAW
                     EWRPWLPGPHGYATSWLYDGGGLLHQAISQLV"
     gene            878..1063
                     /gene="pufA"
                     /locus_tag="VHX39_05615"
     CDS             878..1063
                     /gene="pufA"
                     /locus_tag="VHX39_05615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="light-harvesting antenna LH1, alpha subunit"
                     /protein_id="HEX3990632.1"
                     /translation="MWRLWLLFDPRRVLVALSIFLFVLALLIHFILLSTDRFNWLEGP
                     HHGATAAEMAPLPSTAK"
     gene            1170..1997
                     /gene="pufL"
                     /locus_tag="VHX39_05620"
     CDS             1170..1997
                     /gene="pufL"
                     /locus_tag="VHX39_05620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009521 - photosystem [Evidence IEA];
                     GO_function: GO:0005488 - binding [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="photosynthetic reaction center subunit L"
                     /protein_id="HEX3990633.1"
                     /translation="MAMLNFEPKYRTRGGTLIGGDLFDFWVGPFYVGFFGVTTIFFAV
                     LGTLLIVWGAALGPTWNLWRISIAPPDLSYGLAFAPLKQGGLWQLITICALGAFCSWA
                     LRQAEIARKLGMGLHIPFAFGFAIFAYFSLVVIRPVLMGAWGYGFPYGIMSHLDWVSN
                     TGYQYLHFHYNPAHMIAVSFFFTNVLALALHGSLVLSAANPGRGEAVKSAEQENAYFR
                     DTIGYSIGTLGIHRLGMFLAVSAAFWSAVCIIISGPFWSRGWPEWWGWWLNLPIWAH"
     gene            2019..3005
                     /gene="pufM"
                     /locus_tag="VHX39_05625"
     CDS             2019..3005
                     /gene="pufM"
                     /locus_tag="VHX39_05625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009521 - photosystem [Evidence IEA];
                     GO_function: GO:0005488 - binding [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="photosynthetic reaction center subunit M"
                     /protein_id="HEX3990634.1"
                     /translation="MAEYQNIFTRVQVRGPTHMGVALPRGSWARSGRPGFSRLLGIIG
                     DAQVGPIYLGFTGIASLICGFISIEIIGLNMWASVDWSPIQFVRQLPWLALEPPPPAY
                     GLKILPPLNEGGWWLLAGFFLTSSILLWWVRMYRRAIALGLGTHTAWAFAAAIWLYLV
                     LGFIRPILMGSWSEAVPFGIFPHLDWTAAFSLRYGNLFYNPFHMLSIVFLYGCAVLFA
                     MHGATILAVSRFGGEREVEQITDRGTAAERAALFWRWTMGFNATFESLHRWGWWFAVL
                     CPLVGGIGILLTGTVVDNWYLWGVKHGIAPMYPHVFPNVVDPATLSAAGGAK"
     gene            3002..4015
                     /gene="pufC"
                     /locus_tag="VHX39_05630"
     CDS             3002..4015
                     /gene="pufC"
                     /locus_tag="VHX39_05630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="photosynthetic reaction center cytochrome PufC"
                     /protein_id="HEX3990635.1"
                     /translation="MSFALRMAAGVIGVAAAAVILTQAERPPMDSIQRGYRGTAMDQI
                     YNPRIVADELAANKIPASLPPLGNGGPKAGTIYKNVQVLNNVGVGEFTRLMASITTWV
                     APTQGCAYCHDVKDMASDSLYTKVVARRMIQMVQHVNADWKQHVADTGVTCFTCHRGQ
                     PVPANVWFDNPGPVQAGGFAQMPAGKNHPTAVAGGSSLPFDPFTPFLEHDEDIRVVSQ
                     TALPTTDHQSIKQTEWTYALMMNFSQSLGVNCTYCHNSRSFTDWDQSTPQRATAWYGI
                     RMVRDLNTTYLDPLHGTFPTARLGVEGDSPKVNCATCHNGIYKPLFGVGMAKGFPELT
                     AAH"
     gene            4083..5072
                     /locus_tag="VHX39_05635"
     CDS             4083..5072
                     /locus_tag="VHX39_05635"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c family protein"
                     /protein_id="HEX3990636.1"
                     /translation="MDSMEVNKTVAAVLVAGIVFFLTGTAGMNLVVEKPLKQPAIKID
                     VPEPAASPGKAAPQLPPIAPLLAKADPAAGEADTKKLGCVACHTFNEGGKAGIGPNLY
                     NVVGGPHAHMKGFDYSTALKSKTGPWTFPELNEWLHQPSAYAPGTRMTFTGIKKDQER
                     ADVIDYLRTLSPKPEPLPSPTEAPPPAAAPAASGSAPAPASATAPAGDPPVETLLASA
                     DPKQGEADTRQLGCVACHTFNEGGKAGVGPNLYGVVGAPHGHMPGYNYTAALKSKAGP
                     WTYDELYLWLKKPSAYAPGTRMTFVGIPKPKERADVIAYLRTLSHNPEPLPTK"
     gene            complement(5106..5426)
                     /locus_tag="VHX39_05640"
     CDS             complement(5106..5426)
                     /locus_tag="VHX39_05640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990637.1"
                     /translation="MTKPNTQQKELPEVTTRQRESRTRRQIMRAGLAAIGGVAAVSAR
                     AQAQADAKIAQAQVQYQLMPKDGAKCSTCVNFEPPASCKIVAGTISPNGWCIAYGPKD
                     QPKG"
     gene            complement(5423..6634)
                     /gene="hemA"
                     /locus_tag="VHX39_05645"
     CDS             complement(5423..6634)
                     /gene="hemA"
                     /locus_tag="VHX39_05645"
                     /EC_number="2.3.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003870 - 5-aminolevulinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-aminolevulinate synthase"
                     /protein_id="HEX3990638.1"
                     /translation="MNYEAFFRDQLDGLRREGNYRIFADLERQVGSFPRATHHREKGR
                     VPVTVWCSNDYLGMGQHQSVLDAMHEALDRCGAGAGGTRNIAGTSHYHVILERELADL
                     HGTEAALVFNSGYMSNWATLSTLAARLPNCVVLSDEFNHASMIEGVRHSRAEKRIFRH
                     NDPEDLQRQLDKLDPATPKLVAFESVYSMDGDIAPITELCDVADRYGAMTYLDEVHAV
                     GLYGPRGGGISQREGIAHRLTVIEGTLAKAFGVVGGYIAGSAVLCDFVRSFASGFIFT
                     TALPPAIAAGAVASIRHLKISQLERTRHQERVASVRRQLDMIGVPHHDNPSHIVPVMV
                     GDPILCKQISDRLLEEFAIYVQSINYPTVPRGTERLRITPSPLHTDADIARLVEALGA
                     IWSELSLRRAA"
     gene            complement(6631..7461)
                     /gene="puhE"
                     /locus_tag="VHX39_05650"
     CDS             complement(6631..7461)
                     /gene="puhE"
                     /locus_tag="VHX39_05650"
                     /inference="COORDINATES: protein motif:HMM:NF023711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0015979 - photosynthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative photosynthetic complex assembly protein
                     PuhE"
                     /protein_id="HEX3990639.1"
                     /translation="MLQHGLPALHGLLIWWVSTCLILFLDSLPRRTFRWSFTTATAVL
                     VGAIYGLITSATDTTVTGAYTAFTCGVLIWGWLEISFYMGYITGPRNHHCHQGCSGWR
                     HFGHAIQASLYHELAVLALAGLVLMLTRGRPNQFGMWTFVVLWWMHQSARLNVFLGVS
                     NLNADFLPEHLAHIRSFFRSAPMNLLFPFSVTASTICAMLMAQQALSSGADTFNATGY
                     TLLTTMMVLAILEHWFLILPVSAARFWNRMWQWSVASRRDRGKTPQPLPREATIGGHP
                     "
     gene            complement(7461..>8042)
                     /gene="acsF"
                     /locus_tag="VHX39_05655"
     CDS             complement(7461..>8042)
                     /gene="acsF"
                     /locus_tag="VHX39_05655"
                     /EC_number="1.14.13.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0048529 - magnesium-protoporphyrin IX
                     monomethyl ester (oxidative) cyclase activity [Evidence
                     IEA];
                     GO_process: GO:0015995 - chlorophyll biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium-protoporphyrin IX monomethyl ester
                     (oxidative) cyclase"
                     /protein_id="HEX3990640.1"
                     /translation="IFYAVYLSEKIGYARYISIFRQLERHPENRIHPIFKWFREWCGD
                     EFRHGEAFALIMRANPQVLTGLNRLWIRFFLLAVFATMFVRDHGRPIFHRALGLDTTE
                     YDMQVFRITTEISKQVFPVTLDLDNPAFLAGLQRLLRISDSMATTKGQYGLGGMIKRV
                     GLMAAAGWTFGRLFLMRPQKHELPRQVRVAPAW"
BASE COUNT         1528 a         2397 c         2499 g         1618 t
ORIGIN      
        1 cgccggcgtg aaaccggaca atgccgcggt gcgggccgcg ctgcgcgcga agccgccgct
       61 ggtgcttttc gggtcttaca atgaacgcat gtacgcggcc gagatgggca accgcagcat
      121 gtatatcccg gcgtcgtttc ccggcgccat catccgccgg gcaaccggca cgccgtacat
      181 gggatatgcg ggtgcgacct atatcgttca ggaattctgc aacgccctgt tcgatgcgct
      241 gttcaacatc ctgccgctgg gcacggacct ggacaaggtc gaaccgacgc cgtcgcggct
      301 gaacgcgagt tgtccgtggg acgacgatgc ccgcgaactg ttcgatgact atctggagac
      361 ggaaccgttt ctggttcgta tctctgccgc gaaacgaatg cgtgaccgga tcgaagccac
      421 cattcgccag gccggcgagg atcgcgtcac cgccggccgc gtcgtcgatg cgctcgccga
      481 gaggcaactc gcatgacgtc gcgctcagac aaaatcgaag agattccgcc ggtttaccgg
      541 atggaatggg tgccgtggcc cgatcatcac ggcaatccca gtcgcgcggg atgggcgcga
      601 caagggccgc aaggccgttc cggagactaa acatatggct ctaaccccag gaggaccctc
      661 acttacaggg ttgacggagg cggaggcgaa ggagttccac ggaatcttca tcaccagctt
      721 catcgtgttc accgtaatcg ccatcatcgc gcatttcctt gcgtgggaat ggcggccttg
      781 gctgcccggc ccccacggat acgccacatc gtggctgtac gacggtggtg gcctgctaca
      841 ccaagccatt tcgcaactcg tttaggagga agcgaaaatg tggagactgt ggcttctatt
      901 cgacccgagg cgcgtactcg tcgctctgag tatcttcctg ttcgttctgg cgttgctgat
      961 ccacttcatt ctgctcagca ccgaccggtt caactggctg gaaggtcccc atcacggcgc
     1021 aaccgcggcg gagatggcac ctttgccatc aaccgcgaaa taggatgccc gagcggaagt
     1081 agcggcggcg gtcagacgta gggcctcctc cgttacttct ctccaaggat cgatttcgac
     1141 ggcctgacgt tctactggag aacctggcga tggcgatgct caattttgaa ccgaaatacc
     1201 gtacgcgcgg gggaactctg attggcggcg atctgttcga cttttgggtc ggtccgttct
     1261 atgtcgggtt ctttggcgta accacgatct tctttgccgt tctcggaacc ctgttgatcg
     1321 tctggggcgc ggcactcggg ccaacctgga atctctggcg catcagcatt gcgccgccgg
     1381 acctgagtta cggcctggcc ttcgcaccgc tgaagcaggg tgggctatgg cagttgataa
     1441 ccatctgcgc gttgggtgcg ttctgttcct gggcgctacg ccaggcagag atcgcacgaa
     1501 agctgggcat gggactgcat attccattcg ccttcggctt cgccatcttc gcctatttca
     1561 gtctggtggt gatccggccg gtgctgatgg gggcgtgggg ctacggcttt ccctatggca
     1621 tcatgagcca cctcgattgg gtgtctaaca caggctatca atatctgcat ttccattaca
     1681 acccggcaca tatgatcgcg gtgagctttt tcttcaccaa cgtgctcgcg ctcgcgttgc
     1741 acgggtcgct ggtgctgtcg gccgccaatc ccggccgggg cgaggccgtg aaatcggcgg
     1801 agcaggagaa cgcgtatttc cgcgatacca tcggctattc gatcggcacc ctgggcattc
     1861 atcggctggg catgttcctg gctgtttcgg cagcgttctg gagtgcagtg tgcatcatca
     1921 ttagtggtcc attctggagc cgcggttggc cggaatggtg gggctggtgg ctcaatctgc
     1981 cgatctgggc gcattgatcc gcggcggggg aggaagaaat ggcagagtat caaaacatat
     2041 tcacccgtgt gcaggtgcgt ggcccgaccc acatgggagt cgcgctgccc aggggtagtt
     2101 gggcccgctc cggccggccc ggattctccc gcttgctcgg gataatcggc gatgcacagg
     2161 ttggtccgat ttacttgggt tttaccggga tcgcgtcgct gatctgcgga ttcatctcga
     2221 tcgagatcat cgggctgaac atgtgggcgt cggtggactg gagtccgata cagttcgttc
     2281 gccaactgcc ctggctcgct cttgaaccgc cgccgccggc ttatggcctg aaaatcctgc
     2341 cgccgctcaa cgaagggggc tggtggctgt tggcgggatt cttcctgacg tcgtctatac
     2401 tgctgtggtg ggtgcggatg tatcgcagag ccatcgcgct gggcctgggc acacacaccg
     2461 cctgggcgtt tgcggcggcg atctggctgt acctggtgtt gggtttcatt cgtccgatcc
     2521 tgatgggcag ttggtccgag gctgttccgt tcgggatatt cccgcacctg gactggacgg
     2581 ccgcgttttc gctgcgctat gggaacctgt tctacaatcc gtttcacatg ctgtcgatcg
     2641 tcttccttta tggatgcgcg gtgctgttcg cgatgcatgg cgcaacgatc ctggctgtca
     2701 gccgtttcgg tggcgaacgc gaagtggaac agatcaccga tcgcggcacc gccgcggaac
     2761 gggcagcgtt gttctggcga tggacgatgg gcttcaacgc cacgttcgaa tcgctgcatc
     2821 gctgggggtg gtggttcgcc gtgctgtgcc cgctggtggg cggcatcggc atcctgctga
     2881 ccggcacggt ggtggacaac tggtacctgt ggggtgtgaa gcacggcatc gccccgatgt
     2941 atccgcacgt cttcccgaat gtcgtcgacc cagccacgct ttcagccgcg ggaggtgcaa
     3001 aatgagcttc gcccttcgca tggcggctgg agtcatcggg gtcgccgccg cggcggttat
     3061 cctgacccag gcggagcggc ccccgatgga cagtattcag cgcgggtatc gcggaaccgc
     3121 gatggatcag atctacaacc cccggatcgt tgccgacgaa ctcgccgcca acaagatccc
     3181 tgcgtcactg ccgccgctgg gcaatggagg ccccaaggca ggcacgattt acaagaatgt
     3241 acaagtgttg aataatgtcg gcgtcggcga gtttacccgg ctgatggctt cgatcacgac
     3301 ctgggtcgcg ccgacacaag gatgtgccta ctgccatgac gtgaaagaca tggcgtccga
     3361 ctcgctttat accaaggttg tcgcgcgccg gatgatacag atggttcagc atgtcaatgc
     3421 cgactggaaa cagcacgtcg ctgacaccgg cgtgacctgc tttacctgcc accgcggaca
     3481 gcccgtcccg gccaacgtgt ggttcgacaa tcctggcccg gtacaggccg gtggatttgc
     3541 tcagatgccc gccggcaaga accatcccac ggccgtggcc ggcggctcat cgttgccgtt
     3601 tgacccgttc acaccgttcc tggagcatga cgaggacatt cgtgtcgttt cgcaaacagc
     3661 gttaccgaca accgatcacc agtcgatcaa gcagaccgag tggacctatg ccctgatgat
     3721 gaatttctcc caatccctgg gcgtgaactg cacctactgc cataacagcc gatccttcac
     3781 cgactgggat cagagcactc cgcagcgcgc gaccgcatgg tatggcatcc gaatggtccg
     3841 cgacctgaac accacgtatc tcgaccccct gcacggcacg ttcccgacag cgcgtcttgg
     3901 tgtcgaaggc gattccccaa aagtgaattg cgcgacgtgc cacaacggca tttataagcc
     3961 tttgttcggc gtggggatgg cgaagggatt tccggaattg acagcggcgc actagtcaaa
     4021 ccgtgccacg cgccaatttc cggataacac agaactgtgc gcgtttgagg agcggggact
     4081 gaatggactc aatggaagtc aacaagaccg tcgcggcggt attggtcgcc gggattgtgt
     4141 ttttcctgac cggcacggcc ggcatgaatc ttgttgtcga gaagccactg aagcaacccg
     4201 cgatcaagat cgacgtgccg gaaccggcgg cttcgcccgg gaaggccgcg ccgcaattgc
     4261 cgccgatcgc gccgttgctg gccaaggcgg atccggccgc cggcgaggca gacaccaaga
     4321 agctcggttg tgtcgcctgc cacaccttca acgagggcgg caaggccggc atcgggccga
     4381 atctgtataa cgtcgtcggt ggaccgcacg cgcatatgaa gggcttcgat tattccaccg
     4441 ctttgaaaag caagaccggt ccgtggacat tccccgaact gaatgaatgg ctccatcaac
     4501 ccagcgccta tgcgcccggc acgcgcatga ccttcaccgg tatcaagaaa gaccaggaac
     4561 gggccgacgt gatcgactac ctgcgaacgc tgtcgccgaa gccggagccg ttgccgtcgc
     4621 cgaccgaggc acctccgccg gcggcggcgc ctgccgcgag cggtagcgcc ccggcccctg
     4681 cctcggccac cgcgccggcc ggtgatccac cggtggaaac attgctggcc agtgcggacc
     4741 cgaaacaagg ggaggctgat acaaggcaac ttgggtgtgt ggcctgccac acgttcaacg
     4801 agggcggtaa ggccggggtg ggacccaacc tgtacggtgt cgtcggggcc ccgcatggtc
     4861 atatgccagg ttataattac acggccgcac tgaagagcaa ggcgggtcca tggacttatg
     4921 acgagctata tctgtggttg aaaaagccca gcgcctatgc gccaggaaca cgcatgacgt
     4981 tcgtgggcat tcccaagccg aaggaacggg ccgacgtgat cgcctacctg cggacattgt
     5041 cacacaatcc ggagccgctg ccgacgaaat agggcccgcg ccggatttgt ccggcgcggc
     5101 cgaaatcatc ccttgggctg gtctttcgga ccataagcga tgcaccagcc gttggggctg
     5161 atcgttcccg caacgatctt gcaggaagcg ggtggttcaa aattcacgca cgtgctgcac
     5221 ttggcgccat ctttgggcat cagttgatat tgcacctgtg cctgggcgat tttcgcgtcg
     5281 gcctgagctt gggcgcgggc gctgacggcc gccacgccgc caatcgccgc aagtccggcc
     5341 cgcatgatct gccgccgcgt tctgctttcg cgttgtcgtg tcgtcacctc gggcaactcc
     5401 ttttgttgtg tattgggttt ggtcatgcag ctcgccgcag gctgagctct gaccagatcg
     5461 cgcccagtgc ttccaccagg cgggcgatat cggcgtcggt gtgcagcggt gacggtgtga
     5521 tccgcagccg ttccgtaccg cgcggcacgg tgggatagtt gatggattgg acatagatcg
     5581 cgaattcttc cagcaggcga tcgctgatct gcttgcagag gatcggatcg ccaaccatca
     5641 ccggaacgat atggctggga ttgtcgtggt gcggaacgcc tatcatatcg agttggcgcc
     5701 gtaccgatgc gacacgttcc tggtggcggg tacgctcgag ttgactgatc ttcaggtggc
     5761 gaatggatgc caccgcgccg gctgcgatcg ccggcggcag tgccgtcgtg aaaatgaacc
     5821 ccgatgcgaa gctgcgcacg aaatcacaca gcacggctga ccccgcgatg tagcccccca
     5881 ccacaccgaa agctttcgcc agggttccct caatcacggt cagccggtgc gcgatgccct
     5941 cgcgctgact gatgccgccg ccgcgcgggc cgtagaggcc cacggcatgt acttcatcga
     6001 gatacgtcat cgccccgtac ctgtccgcga cgtcgcacaa ctcggtgatg ggggcgatgt
     6061 cgccgtccat cgaatagacc gattcgaagg ccacgagttt cggcgtcgcg ggatcgagct
     6121 tgtccaattg ccgctgcaga tcctccgggt cattgtgccg gaagatgcgc ttttccgctc
     6181 ggctgtgacg tacgccctcg atcatggaag cgtggttgaa ctcgtccgaa agcacgacac
     6241 aattcggcaa ccgagcggcg agcgtgctga gggtcgccca gttggacatg tagccggagt
     6301 tgaagaccag cgcggcctcc gtgccatgca ggtcggccag ttcgcgttcc agtatcacat
     6361 ggtaatgact tgtgccggcg atgttgcgcg tgccacccgc gcctgcgccg caccggtcca
     6421 gtgcctcatg catggcatcc agtaccgact gatgctggcc cattccaagg tagtcgttgg
     6481 agcaccagac cgttaccggc acccgcccct tttcccgatg atgcgtcgca cgggggaaac
     6541 tgcccacctg ccgttccaga tcggcgaaga tgcgatagtt tccttcccgg cgcaggccgt
     6601 ccaactgatc acggaagaaa gcttcgtagt tcatggatgt cccccgattg ttgcttccct
     6661 gggaagtggt tgcggcgtct tgccgcgatc acggcgcgag gccacgctcc attgccacat
     6721 ccggttccaa aaccgagcgg cggagacagg caggatcagg aaccagtgtt ccaggatcgc
     6781 cagtaccatc attgtcgtga gcagggtgta gccggtcgcg ttgaacgtat cggctccgga
     6841 agagagtgcc tgctgggcca tcagcatggc acagatcgtc gaggcggtga ccgaaaatgg
     6901 aaaaagcaga ttcatcggcg cgctgcgaaa gaaacttctg atatgggcga gatgttcggg
     6961 caggaagtcg gcattcaggt tgctgacacc aaggaacacg ttcagccggg cgctctggtg
     7021 catccaccac agaacgacga acgtccacat cccaaactga tttggtcgcc cccgggtcaa
     7081 catcagcact agcccggcga gggcaagcac tgcgagttca tggtaaagac tggcctggat
     7141 cgcgtggcca aagtgacgcc agccggagca tccctggtgg cagtgatggt tgcgcggccc
     7201 ggtgatgtat cccatgtaaa agcttatttc gagccagccc catatcagga caccacaggt
     7261 gaacgcagtg taagcgcccg taacggttgt atcggttgca ctggtgatga ggccatagat
     7321 cgcgccgacg agaaccgctg tcgcggtcgt gaagctccat cggaaggtgc gccgcggcaa
     7381 actgtcgagg aacaggatca gacaggtgct gacccaccag atcagcaggc catgcagcgc
     7441 gggaagaccg tgttgaagca tcaccaggcc ggcgccacgc ggacctggcg gggcagttcg
     7501 tgcttttgcg gccgcatcag gaacaggcgc ccaaacgtcc acccagcggc cgccatcagc
     7561 cccacgcgct tgatcatgcc gccaagtccg tattggcctt tggtcgttgc catgctgtcg
     7621 ctgattctca gcagacgctg tagcccggcg aggaatgccg ggttatccag atccagtgtg
     7681 actggaaaga cctgcttgct gatctccgtc gtgatgcgga acacctgcat gtcgtattcc
     7741 gtggtatcta gaccaagcgc gcggtggaaa atcggccgtc catggtcgcg gacgaacatg
     7801 gtcgcgaaca cggccaatag gaaaaaccgg atccacaatc tgttgaggcc agtcaacacc
     7861 tgagggtttg cccgcatgat cagcgcaaag gcttcgccgt ggcggaattc atcgccgcac
     7921 cattcccgga accatttgaa gatcgggtgg atacggtttt cgggatgccg ttcgagttgg
     7981 cggaaaatgg agatgtagcg ggcatagccg atcttttccg acagatagac agcgtagaaa
     8041 at
//
LOCUS       DATAVD010000307         4918 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3193194, whole genome shotgun sequence.
ACCESSION   DATAVD010000307 DATAVD010000000
VERSION     DATAVD010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4918
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3193194"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1056
                     /locus_tag="VHX39_05660"
     CDS             <1..1056
                     /locus_tag="VHX39_05660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990641.1"
                     /translation="DGDRAYIGHMDAPHGTSVVDVSDPKHPRITASVDIPPGLHSHKV
                     RVANDLMLVNRERTRGDMPNADFVGLRVFDVSNPDKPRDIHHWHCVGTGVHRFTFDGR
                     FAYISAEQEGYIGTIVMILDFANPEKPEEVGRWWMPGQWTAGGETPSWKGRNHRCHHP
                     IRRGDRLYVSYWYGGGVILDISDMSKPRTISTIDWSPPFGWPTHSLVPIDVPIAGHKW
                     MLVADEHVQPLDPKLSPELPAMVWMVNITDETNPVPVSTFQLPELVGVASPLMTGCHQ
                     PVETIVGNEVPAAWFASGLRIIDISNPLALKQAAWWMPDVPSGAQRVCSNDVYVDHRG
                     LIYMIDRNRGLSILERI"
     gene            1133..3754
                     /locus_tag="VHX39_05665"
     CDS             1133..3754
                     /locus_tag="VHX39_05665"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX3990642.1"
                     /translation="MDGTVGTIRGVTRLRDGRRWLRALRLAPELLVILVCIAVMWGAV
                     SFALWQARVAAVKSARQQTATLARAFAESTERISADRDRELLSLRASFAEKGSAFDLS
                     EWLRTQSSPDGMTLQIGITDRAGIVTQNSVPMNGRRFDLSDREHFRVHLDNDRDAIFI
                     SQPVIGRITGRCSVQYTRKLLDRDGGFAGIGVNSVSCDDLSRFYQTVDIGDGFVMLAG
                     FDGVIRGYGPVRRDVVGTDLKQASDFAATFAMKDGTFTASPPWDSVRRIISFRRLEHY
                     PLVVLVGYGDAKVFAQYWPMRGRAIEVGGAMTLIILCLGFFWIQQRIRSAASRQALVL
                     TLENMSQGILMIDQDGRMPVVNRRAAELLGLPAGLLEPGREMRCAEADGLGMLIQSDD
                     SDPGTIEHGTLHKNGRIIEILSQHLRGGGQVRTFTDVTERRIADARIRHMAHHDTLTG
                     LANRAMLNERLAELLDHPDVDQFGLLCLDLDGFKLVNDTLGHEAGDRLLRDVGRRLHT
                     LVGDSTFLARTGGDEFAILCLDGPQPEATEAFADVILTAMTDPIDIDGALFRLSASIG
                     LAVHPADGASAVELIRHADTAMYQAKTRGRGFAVRFDPEMDRNQHERSMIERDLRHAL
                     GGHEFEVWFQPRFETKGLRVTGFEALARWRHPDWGFISPVRFIPVAEQCGLIAELGLR
                     VLNDACDFAVSLPDGRIAVNLSPAQFRLDNLADIIANVLADKKLPTRRLELEITEGVL
                     IGDETQALSTLNRLHDRGLQLALDDFGTGYASLSYLRRFPFDRIKIDQSFVRAQEHDP
                     ATRAITETILTMASRLRLEVTAEGVETDRQLNLLLDQGCPEVQGFLLGRPMPAAQARA
                     FYTGRGLPEPVRRMTAA"
     gene            complement(3777..>4918)
                     /locus_tag="VHX39_05670"
     CDS             complement(3777..>4918)
                     /locus_tag="VHX39_05670"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3990643.1"
                     /translation="ALEHLLVLDLTSHLSGPYCAMLLADHGAEVIKIEPPSGDSARNM
                     PPFVNGESAPFMTWNRNKRSVVMDLKQATDRNALLKLIDRADVLVENYRPGVLARLGL
                     GWDVLHQRNPRLILGSISGFGQTGPYSSRGGFDLITQAMSGLMSTNGPADGEPFRLPI
                     AISDVTAGMFLAFGILAAIEARHRTGLGQHVETSLLEAATSLSVYESAHYFATGTRPP
                     RIGQAHRGSSPYQCFATADGHITVGASQQHFFAKLCDIVGQPELAADPRFRTLADRVA
                     HNDVLVARLAETLRGQPSAHWLTALEAAGIPAGPVLHYDEVFTDPHILAREMVVQTDH
                     PVTGTFHTLGVTVKLSDTPGAIRRPAPRLGEHTEDVLGRRGDAAE"
BASE COUNT          923 a         1456 c         1554 g          985 t
ORIGIN      
        1 gatggcgatc gtgcttatat cggacacatg gatgcaccgc acggcacctc ggtggtcgat
       61 gtgtcggatc cgaaacatcc gcgcatcacc gcctcggtcg acattccgcc tgggctgcat
      121 tcccataagg tacgcgttgc caacgatctg atgctggtga atcgcgagcg cacgcgcggc
      181 gacatgccga acgccgattt cgtcgggctg cgcgttttcg atgtcagcaa cccggacaag
      241 ccgcgcgaca ttcaccattg gcactgcgtc ggcaccggcg tgcatcgttt cacgttcgac
      301 ggccgctttg cttatatttc tgccgaacaa gaaggctata tcggcaccat cgtcatgatc
      361 ctggacttcg ccaacccgga aaaaccggag gaggtcggac ggtggtggat gcccggccaa
      421 tggaccgccg gtggcgaaac gccgagctgg aaaggccgca atcatcgttg ccaccatccg
      481 attcgccgcg gcgaccggct gtatgtcagt tattggtatg gtggcggcgt catcctcgac
      541 atcagcgaca tgagcaagcc gcgcacgatc tccacgatcg attggagccc tccgtttggc
      601 tggcctacgc acagcctggt gccgatcgat gtgccgatcg ccggccataa gtggatgctg
      661 gtggccgatg agcacgtgca gccgcttgat cccaaattgt cgcccgaatt gccggcgatg
      721 gtctggatgg tgaacattac ggatgaaacc aatccggttc cggtcagcac gtttcagttg
      781 ccggaactgg ttggggtcgc ctcaccgctg atgaccgggt gtcatcaacc ggtcgaaacg
      841 attgtcggca atgaggtgcc ggcggcgtgg tttgccagtg gcctcagaat tatcgacatc
      901 agcaatccgc tggcgttgaa acaggcggcg tggtggatgc ccgatgtgcc gtccggtgcg
      961 cagcgggttt gcagcaatga cgtttacgtc gaccatcggg gcctgatcta tatgattgac
     1021 cgcaaccggg ggttgtcgat tctcgagcgc atttagcaaa tcgcccggcc gtttaacagt
     1081 aagttaacca ttctcgccga cactgcgcca gcgaacacgg acgagggcca ggatggacgg
     1141 cacggtcggc acgatccgcg gggtgacccg tctgagggat ggccgacgtt ggcttcgcgc
     1201 gctgcgcctc gctccggaat tgctggtgat cctggtgtgc atcgcggtca tgtggggggc
     1261 ggtgtcgttc gctctgtggc aggcccgggt cgcagccgtt aagtccgccc gccaacagac
     1321 cgcaacgctg gctcgcgcct ttgctgagag caccgagcgt atcagtgccg atcgggaccg
     1381 ggaactgctc agcttacggg ccagtttcgc ggaaaaaggc agcgcgttcg acctgtcgga
     1441 gtggctgcga acgcaatctt cgcctgatgg tatgaccttg cagatcggta taaccgatcg
     1501 cgcggggatc gttacccaga actccgtgcc gatgaacggc cggcgtttcg acctgtcgga
     1561 ccgcgagcat tttcgtgtgc atctcgacaa tgatcgggac gccattttca tcagtcaacc
     1621 cgtgatcggc cgcatcaccg gtcgatgctc ggtgcaatat acccgcaaac tgttggatcg
     1681 cgatggaggt ttcgctggta ttggagtcaa ttcggtgagt tgcgacgatt tgtcgcgatt
     1741 ttaccaaacc gtcgacatcg gcgatgggtt cgtcatgctg gccggattcg atggagtcat
     1801 tcggggctac ggcccggtac gccgcgatgt tgttggcacg gatctgaagc aggcatcgga
     1861 ttttgccgct acgtttgcga tgaaggacgg gacgtttacc gcttcgccgc cgtgggacag
     1921 tgtccggcgg atcatcagct tccgccgcct ggagcactat cccctcgtcg ttctggtcgg
     1981 ttatggcgac gcgaaagtgt ttgcccaata ttggccgatg cggggccggg cgatcgaggt
     2041 cggcggcgcg atgacactga tcatcctgtg tctgggcttt ttctggattc aacagcgcat
     2101 acgctcggcg gcatcgcggc aggccttggt gctcacgctg gagaacatga gccaggggat
     2161 cctgatgatc gaccaggatg gccggatgcc ggttgtcaat cgccgtgccg cggagttgct
     2221 cggcttaccg gcgggattgc tggaacccgg acgggagatg cgttgtgcag aagccgacgg
     2281 tctcggcatg ctgatacaat ccgacgacag tgatcccggg acaatcgagc atggtactct
     2341 acataagaat ggtcgcatca ttgagatcct cagccagcac ctgcggggcg gtgggcaggt
     2401 gcgaaccttt accgatgtca ctgagcggcg gatcgcggac gcacgcattc gccatatggc
     2461 gcaccacgat acgctgaccg gcctggcgaa tcgggcaatg ttgaatgagc ggctggcgga
     2521 attgttggac cacccggacg tcgaccagtt tgggttgctg tgtctcgatc tcgatggctt
     2581 caaactggtc aatgacacgt tgggtcacga ggcgggcgac cggctgctgc gggacgtggg
     2641 ccggcgactg cacactctgg tgggcgacag tacgtttctg gcacgtaccg gtggcgatga
     2701 attcgccata ctatgtctcg acggtccgca gccggaggca accgaggcct tcgccgatgt
     2761 catcctgacc gccatgaccg atccgatcga catcgatgga gctctgtttc ggctgtccgc
     2821 aagcatcggc ctcgcggttc atccggccga tggagcgagt gccgtcgaac tgatcaggca
     2881 tgccgatacc gcgatgtatc aggccaagac gcgtggccgc ggctttgcag ttcggttcga
     2941 tcccgagatg gatcggaacc agcatgaacg cagcatgatc gagcgcgacc tgcgccatgc
     3001 cctgggcggc cacgaattcg aggtttggtt tcaaccacgg tttgaaacca aaggactgcg
     3061 cgtcaccggc tttgaggccc tggcacgctg gcgtcacccg gactggggtt ttatctcgcc
     3121 tgtccggttc attcctgttg ccgaacaatg tggcctgatc gccgagcttg gcctgcgggt
     3181 gctgaacgac gcctgtgact ttgcggtcag cctgccggac ggccgcattg cggtgaattt
     3241 gtcgcccgcg cagtttcgcc tggataacct ggcggacatc attgccaatg tgctggctga
     3301 taaaaaactt ccgaccaggc ggctggaact ggagattacc gaaggcgtgt tgatcgggga
     3361 tgaaacgcag gctctaagta ccctgaaccg cctgcacgac cgcggattgc agctcgcgtt
     3421 ggacgacttc ggcaccggtt acgccagcct gagttatttg cggcgatttc cgttcgaccg
     3481 catcaaaatc gaccagtcgt tcgtgcgagc gcaggaacac gatccggcga cccgcgccat
     3541 caccgagacc atcctgacca tggcgagccg gcttcggctg gaggtcaccg ccgagggcgt
     3601 ggaaaccgat cgccaactca atctcctgct cgatcagggc tgtccggaag tgcaggggtt
     3661 cttgcttggc cggccgatgc cggcggccca ggcgcgggca ttttatacgg gccgcggcct
     3721 gcccgagccg gtgcgacgaa tgacggctgc gtgacatcgg caaacggcgt tgcgcgtcac
     3781 tccgccgcat cgcctcggcg accgagaacg tcttccgtgt gttcgcccag acgcggcgcc
     3841 ggccgccgaa tcgcgcccgg cgtgtcagac agcttgaccg tgacgccaag cgtgtgaaac
     3901 gttccggtaa ccggatgatc ggtctgcaca accatctctc gggccaggat atgcgggtcg
     3961 gtaaagactt catcgtaatg caggaccggc ccagcgggga tgcctgccgc ttcgagcgcc
     4021 gtgagccagt gtgccgatgg ttgccctcgc aacgtttcag ccagccgcgc caccaacacg
     4081 tcattatgcg cgacgcgatc ggcgagggtg cggaaccgtg gatcggccgc cagttcaggc
     4141 tgaccgacga tgtcgcaaag tttcgcaaag aaatgttgct gtgacgcacc gacggtgatg
     4201 tgcccgtctg cggtggcgaa acactgatac ggcgaactcc cccgatgcgc ctggccgatc
     4261 cgtggaggtc ttgtgccggt agcaaaataa tgcgccgact cgtaaaccga aagcgaggta
     4321 gcagcctcca acaatgacgt ctccacatgc tggccgaggc cggtgcgatg ccgcgcctcg
     4381 atcgctgcga gtataccgaa ggccagaaac atgccggcgg tgacgtcgga tatcgcgatc
     4441 ggtaagcgaa acggttcgcc atccgcgggc ccgttggtgc tcatcagccc ggacatcgcc
     4501 tgcgtgatca gatcgaaccc gcctcggctg ctgtatggcc cggtctgccc aaaccccgag
     4561 atcgacccca aaatgagccg aggattgcgt tgatgcagca cgtcccaccc cagaccgaga
     4621 cgggccagca ccccgggacg gtaattttcc accagcacgt cggctcggtc gatcaatttc
     4681 agcaatgcgt ttcgatccgt cgcctgcttc aggtccatga ccaccgagcg tttgttacgg
     4741 ttccacgtca tgaacggcgc gctctcgcca ttcacgaagg gcggcatgtt gcgtgcggaa
     4801 tcaccggacg gtggctcgat tttgatcacc tcggcgccat gatccgccaa cagcattgca
     4861 caatacggac cagaaagatg gctggtcagg tcgagcacca ataagtgttc cagggcgc
//
LOCUS       DATAVD010000308         2432 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3567168, whole genome shotgun sequence.
ACCESSION   DATAVD010000308 DATAVD010000000
VERSION     DATAVD010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3567168"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            316..1290
                     /gene="cysK"
                     /locus_tag="VHX39_05675"
     CDS             316..1290
                     /gene="cysK"
                     /locus_tag="VHX39_05675"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEX3990644.1"
                     /translation="MARIAANITELIGHTPLVRLNRVAAGLAATVVVKLESQNPLSSV
                     KDRIGNAMIEDAEKKGRIKPGETVLIEPTSGNTGIALAFVAAVKGYKIILTMPETMSL
                     ERRVLLLAFGAEIVLTPGPNGMKGAIAKANEILAKTPNGYILQQFDNPANPAIHVATT
                     GPEIWEDTDGKADILISGVGTGGTLTGVARYIKERKPEFKAIAVEPTDSAVLSGGKPG
                     PHKIQGIGAGFVPSILDTHLIDEVVQVTNDESIAMGRRLPLEEGLFVGISSGAAVAAA
                     LKVAARPENAGKLIVVIVPSFGERYLSSALFDSLRQEALALPTQPVTV"
     gene            1441..2172
                     /gene="cysE"
                     /locus_tag="VHX39_05680"
     CDS             1441..2172
                     /gene="cysE"
                     /locus_tag="VHX39_05680"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEX3990645.1"
                     /translation="MPLFARIREDMHSVLERDPAARSRLEVLTCYPGLWAVWIHRVSH
                     LLWRARFRLPARMLSQVGRFYTGVDIHPGALLGRRLFIDHATGVVIGETAIVGSDVTL
                     YQGVTLGGTGKGHGKRHPTLCDGVFVGNNANVLGNITVGANSRVGAGSVVLADVPPNS
                     TVVGVPAHIVYRNGERVLITDPHDIKDPLSDALIALAARVDELEKRLGGEQKAEPFAA
                     EEADRTAYREELERVSYFVSMGEGI"
BASE COUNT          454 a          783 c          758 g          437 t
ORIGIN      
        1 caaatgatcg cgacccggtg ctgtcgcggg aagcggccct ggtatcgaac cggccgaaac
       61 cggcgcgggc gtagcgtggc agtgcgcgtg ccggttccaa ctccattgca ttctgaggcc
      121 tgccgcttgc cacatcgagc atcaggggac taccctgttg gcatgcgtcg atgtcgctga
      181 caccgccctg gtgagagctc cgatgcccgg cgtgcgcccc gattcgcgcg cgtttttccc
      241 cgtctgacag ctccaccgcc actcccaact catcccaaag catgtccggg acgtttcctg
      301 gacgaggaga tcatcatggc gcgtattgcc gcgaatataa ctgaactgat tggacacacc
      361 ccgctcgtgc gtttgaaccg cgtggccgcc ggactggccg cgacggtagt cgtcaaactg
      421 gagagccaga acccgctgtc gagcgtcaag gaccgcatcg gcaacgccat gattgaagat
      481 gccgagaaaa agggcaggat caagcccggc gagaccgttc tcatcgagcc gaccagcggc
      541 aacaccggca tcgcgctggc cttcgttgcg gccgtcaagg gttacaagat catcctcacg
      601 atgcccgaaa ccatgagcct cgagcgccgc gttctgctgc ttgccttcgg cgccgagatc
      661 gtgctcacgc ctggacctaa cggcatgaaa ggcgccatcg ccaaggccaa cgaaatcctg
      721 gccaagacac ccaacggcta tatcctgcag cagtttgaca atcccgccaa cccggccatt
      781 cacgtggcca cgacgggccc ggagatctgg gaagacaccg acggcaaagc cgacattctc
      841 atctccggcg tgggaacggg cggcacgctg accggcgtgg cccgctacat caaggagcgc
      901 aagccggagt tcaaggccat cgccgtggag cccaccgaca gcgcggtact ctccggtggc
      961 aagccggggc cgcacaagat tcagggcatc ggcgccggct tcgtgcccag cattctggac
     1021 acgcacctga tcgacgaagt ggtccaggtg accaacgacg agtcgatcgc catgggccgc
     1081 cgactgccgc tcgaagaagg gctgttcgtg ggtatttcct ccggcgcagc ggtggccgcc
     1141 gccctcaaag tggccgcgcg gccggaaaat gcaggcaagc tgatcgtcgt catcgtgccc
     1201 agcttcggcg agcgctacct gtccagcgcc ctgttcgatt cgctgcgcca ggaagcgctg
     1261 gcgctgccca cgcaaccggt cacggtgtag gagatctctt tgttcctcct tcggcagtag
     1321 cgcaaatctc ggatccccac cctcgcgacc agcgtatttt cgtcgccggg gtgagaaacc
     1381 gcgattctca acagaaaccg ttctcgctga accaggcgaa cggccaccag acgtgtcgcc
     1441 atgcccttgt tcgctcgtat ccgcgaagac atgcactccg tgctggagcg ggatccggct
     1501 gcgcgttcgc ggcttgaggt gctgacgtgc tatcccgggc tctgggcggt gtggattcat
     1561 cgcgtttccc acctgctgtg gcgggccaga ttccgactgc cggcgcgcat gctgtcgcag
     1621 gtggggcgct tctatacggg ggtcgatatc catccgggag cgctgctcgg ccggcgcctc
     1681 ttcatcgacc atgccacggg cgttgtgatc ggcgagaccg cgatcgtggg cagcgacgtc
     1741 accctctacc agggtgtcac gctgggcggc accggcaagg gacatggcaa gcggcatccg
     1801 acactctgcg acggcgtctt tgtcggcaac aacgccaatg tgctgggcaa catcacggtg
     1861 ggcgcgaact cgcgcgtggg cgcaggctcc gtggtgctgg ccgatgtgcc gcccaactcg
     1921 acggtcgtcg gcgtgccggc gcacatcgtt taccgcaacg gcgagcgggt gctcatcacc
     1981 gatccgcacg acatcaagga tccactctcg gacgcactga tcgccctggc cgcccgcgtc
     2041 gatgagcttg aaaagcgtct cgggggcgaa cagaaggctg agcctttcgc ggccgaagaa
     2101 gccgaccgca cagcctaccg ggaggaactg gaacgggtca gttattttgt gtcgatggga
     2161 gaagggattt agccgtttcg gaacacacgc agactctctc aaggccttga aaggcgatgt
     2221 tttctagagg aaaaggccac ttcgctgtgt tctgacggcc cctcaacaat tccgaaacgg
     2281 ctcgggcgta tccttcctca tcatttcggc agttgcgtcg tatcccatcc gccaccgagg
     2341 gcgcggatta actgcacaga ggcggcgaac tgccgtgtct gcaggtcggt gagggtacgc
     2401 tggttgctga taagagtcgt ctccgcggtc ag
//
LOCUS       DATAVD010000309         2913 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2262046, whole genome shotgun sequence.
ACCESSION   DATAVD010000309 DATAVD010000000
VERSION     DATAVD010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2913
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2262046"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(246..707)
                     /locus_tag="VHX39_05685"
     CDS             complement(246..707)
                     /locus_tag="VHX39_05685"
                     /inference="COORDINATES: protein motif:HMM:NF022182.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HEX3990646.1"
                     /translation="MRWICALIVGLALPLAAQGETLPDGGVTGPEVASVLRHAGYPSD
                     PINDRAGTPVIHSSTGKVLFNVNFYQCNAELRCASIQFIAEYRHKGVAPAVIAAWNRE
                     KHFGRAWQDRYGNSWVAMDVETSHGMTTEALAANISRWITVLNGFGAFLNE"
     gene            complement(904..1914)
                     /locus_tag="VHX39_05690"
     CDS             complement(904..1914)
                     /locus_tag="VHX39_05690"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3990647.1"
                     /translation="MLSLSVLDQSTIVTGRPPDASIRESIRLAQFCETLGYARYWCAE
                     HHNSDSQAGTAPEILISAIAATTQRIRVGSAGVMLPHYAALKVAEQFRVLDAIAPGRI
                     DLGLGRAPGSDGRTAYALNPRADVAADEFPAAVRDLIGWTSGEKLVEGHPFRDIRAQP
                     MAPTRPEIWILGSSDYGAQVAAYFGLPFCFAHFITEGRGLEQPFALYREGYRPSTAHP
                     TPHGAICVWAVTAETPAEAARLFSSREISRLNRDRGIYAALPSPDEAAAQVLSDAEKA
                     RVERIRSRSIYGTPDVVAAKLRALAEEFQIEEIAILTTVHDPEARRRSYALLAAEFGM
                     SG"
     gene            2202..>2913
                     /locus_tag="VHX39_05695"
     CDS             2202..>2913
                     /locus_tag="VHX39_05695"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEX3990648.1"
                     /translation="MDIIQPESYAIPSSVSISNNLPAKSPYKPYIKHAKTEPATRPSD
                     AKPWDVAALCWAYDWPVGLVGGGVIAIVELGGGWVSSDLEKFCMHNNIPVPSVTDVSV
                     DGTRNRPGADADSDGEVALDIQVAAAAYSVATGKPAIIRVYWANDIAAAVRAALQDGC
                     DVCSISWGADEAEWGRPAAEDMEHAAAAAVAAGMVVLAASGDNDSSDGGPNRANVDTP
                     ASCPHVIACGGTRKTATKE"
BASE COUNT          587 a          885 c          902 g          539 t
ORIGIN      
        1 actcatcggt tggacctcgg gcgttgaagc gggttgcctg ccagcaaggt gtcaggccca
       61 ggcggcgtga cggttacggg atgaccggga aacgacctca ggcacgatcg ggttccgaac
      121 gtctgactgt acggccaaat gcgccactac cgcatcaaac aacacgccat tggcggaccg
      181 gtcaatgcgt gtgcgaatct tgcgccatgg cgcccagggt gatcacggac gattgcaaca
      241 cgacattact cattgaggaa tgccccgaat ccattcaaca ccgtgatcca tcggctgatg
      301 ttggcggcca gcgcctcggt cgtcatgccg tgactggttt cgacatccat cgccacccag
      361 gagttaccgt atcggtcctg ccaggcccgg ccgaaatgct tctcccggtt ccaggctgcg
      421 atgactgccg gcgctacgcc cttgtgccga tattccgcaa tgaactggat cgacgcgcag
      481 cgaagttccg cattgcactg gtagaagttt acattgaaca acaccttgcc cgttgaactg
      541 tgaatgaccg gtgtgccggc ccggtcgtta atgggatccg acggatatcc ggcgtggcgt
      601 aacacggacg caacttccgg tccggtcact ccgccatcgg gcaaagtctc tccctgggcg
      661 gcgagcggca aggccaggcc cacgatcaag gcacaaatcc agcgcatcca aggtctccgg
      721 ttgggcggac atgtgccgga ccgaacggca ctctggcaag cgcagcactg tgacggaatg
      781 gacacgatcg cccccgtgga cgatccggat tattcgatgg caaccgccgg ccggcgttgc
      841 gcgcagagcg ccatcctccg ggctgcggct gtcacgacat cagcgaccga agtgcttggc
      901 aaatcatcct gacattccga attctgcagc cagcagcgca taagatcgcc gccgcgcctc
      961 gggatcgtgc acggtcgtca agatggcgat ttcttcgatt tggaattcct cagccagcgc
     1021 ccggagtttc gccgcgacga catccggcgt cccgtaaatc gaccgcgacc ggatccgctc
     1081 gacgcgggct ttttcagcat cggacaacac ttgtgcagcg gcttcgtcgg gcgagggcag
     1141 ggcagcatat attcccctgt cccggttcag ccgggaaatt tcccgcgaac tgaacaaccg
     1201 cgctgcctcg gccggcgttt ctgcggtaac agcccagacg cagatcgcac cgtgcggcgt
     1261 gggatgcgcg gttgaggggc ggtaaccctc gcgataaagc gcgaacggct gctcgaggcc
     1321 gcgtccctcg gtgataaaat gcgcgaaaca gaacggcagg ccgaaatagg ccgcgacctg
     1381 ggcgccataa tcggaactgc cgaggatcca gatttccggc cgggtcggtg ccatcggttg
     1441 ggcgcgaatg tctcgaaatg gatggccctc gaccagtttt tcgccgctgg tccaaccgat
     1501 caggtcgcgc acggcggcgg gaaattcatc cgccgccaca tcggcgcgcg ggttgagtgc
     1561 gtaggccgtg cgtccgtccg agccgggcgc tcgcccaagc cccagatcga tccttccggg
     1621 agcaatcgca tcgagcacgc gaaattgctc cgctaccttg agcgccgcgt agtgcggcaa
     1681 catgacaccg gccgacccga cacggatccg ttgggtcgtt gcggcgatgg cactgatcag
     1741 aatttccggt gcggtgccgg cctgactgtc ggaattatgg tgctcggcac accaataccg
     1801 cgcgtagccc agggtctcgc agaactgggc gaggcggatg ctctcccgga tcgaggcgtc
     1861 gggcggtcgt ccggttacga tggtagactg atctaggacg gagaggctca gcacgctgta
     1921 ctcctgcgaa ccggaaagac ctatgatgat ggcgccggtg agcggtgcaa gggtagtcct
     1981 tgcgcagaag ctgtcttgcg taccgcacct cggtgatctg ggcacacgat tgcccgcttg
     2041 aatcgaacga ttgtttctgt tattatgatt aacgtgttca gaggcggctc aatgtcggcc
     2101 ggggcacgat atggtcggtg acgatgtctg aatccggcgg ccgattgggc gtatctcacc
     2161 ggtcatagaa ttttcaaacc agatatcgat caaaggaaga catggacatc attcaaccgg
     2221 aatcttacgc gataccgtcc tcagttagta tatctaataa tctaccggca aaatcgccct
     2281 ataaacccta tatcaaacac gcgaaaaccg aaccggcaac ccgcccatcc gacgcaaagc
     2341 cgtgggacgt tgccgcgtta tgctgggctt acgactggcc ggtcggcctc gtcggcggcg
     2401 gagtcatcgc catcgtcgaa ctgggtggcg gctgggtttc gtccgacctc gaaaagttct
     2461 gcatgcacaa taacataccg gtgccttccg tcaccgatgt ctcggtcgac ggaacgcgca
     2521 accggccagg agccgacgcc gattccgacg gggaggtcgc tctcgacatc caggtcgcgg
     2581 cggcagccta ttcggtggca accggcaagc cggccatcat ccgggtctac tgggccaatg
     2641 atattgctgc agccgtcaga gccgcgctgc aggacggctg cgacgtttgc tccatctcat
     2701 ggggagcgga cgaggccgaa tggggaaggc ctgcggctga agacatggaa cacgccgccg
     2761 cggcagctgt ggcagcggga atggtggtgc ttgcggcatc cggtgacaac gattcctcgg
     2821 atggcggccc aaaccgggcc aatgtcgata cgcccgcgag ttgcccgcac gtgattgcat
     2881 gcggtggcac acgcaagact gcgaccaaag aaa
//
LOCUS       DATAVD010000310         7868 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1145977, whole genome shotgun sequence.
ACCESSION   DATAVD010000310 DATAVD010000000
VERSION     DATAVD010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7868
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1145977"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            177..1241
                     /locus_tag="VHX39_05700"
     CDS             177..1241
                     /locus_tag="VHX39_05700"
                     /inference="COORDINATES: protein motif:HMM:NF033545.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEX3990649.1"
                     /translation="MIRPHFLDPESRRDLIELARDGSAAHRLARRANALVLLDDGMSC
                     AAIAKVLFLDDDTIRTWYQLYQQDGIEGLAGFGHEGGFCRLTVEQQDKLKAWINETLP
                     RTTRQIGAWIALECGIDYQTRSGLIALLHRLDMEHRKPKAISRKLDPVKQEGFIKAYE
                     VLMNQLSADEVVVFADAVHPTHAVRPVGCWAPKETPVAVQQSSGRNRLNIHGAIDLET
                     GQTIMKDVLTVDALSTIMLLMAIQAKYPGLGSIHVFLDNARYHHAKLVQTWLAQPGCR
                     IKLHFVPAYCPHLNPIERLWGLMHRHITHNKCYAMFKDFRMAMLTFLRDSVPRNWQTF
                     RDEVTDNFRIINPTGFRIIA"
     gene            1238..3010
                     /locus_tag="VHX39_05705"
                     /pseudo
     CDS             1238..3010
                     /locus_tag="VHX39_05705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014001292.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
     gene            complement(3085..3756)
                     /locus_tag="VHX39_05710"
     CDS             complement(3085..3756)
                     /locus_tag="VHX39_05710"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3990650.1"
                     /translation="MAEAAGSIHAEIMRRIHGTNIYSGFAPTFAEDLQGWNSEHTSFE
                     EIISGLRPSVVIDVGVWKGASTIYLANVMKRHGLAGAVIGVDTFLGSVEHWDPKSAFS
                     GLIPFRFGMPMLYEQFLSNVVRCGAQDRIVPLAQTSMVAGELMRRLGIRAGLIHIDAS
                     HDYEDVLQDARTYWEILTPGGFLVGDDYNQDWPDVMRAANQFAEEKSAKVLTSKPKWI
                     IRKAP"
     gene            complement(3934..5313)
                     /locus_tag="VHX39_05715"
     CDS             complement(3934..5313)
                     /locus_tag="VHX39_05715"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX3990651.1"
                     /translation="MTTLATQIAQRIHALRYEDITPDVLTWTTSAFVDTVGVTLAGIQ
                     EDGPRILLKVPGIAAAPGPALILGTTRRTSVLDAALVNGTASHALDYDDVAGSMGGHP
                     SAMLVPALIPLAESLGSSGRDLVLAYVAGFETECRIARGVHHHHYDKGWHPTATLGIF
                     GTVAGAASLLHLSIDQTAIALGMAASFAAGLKANFGTMTKPLHVGHGVRDGLFAALMA
                     QQGFTANPAAFEHKQGFLDVFNGPGTYDTARILDAWYNPFECGGAGDPGLKPYPCCGS
                     THPSIGRMIDLAHRHDLHPERVARITVLPHPRRLPHTNNPDPRTPLAAKFSMQYCVAR
                     ALTDRAVKLSHFEGNAPFDPTVRALMQRLDARPHPDMAEDWGTEIIVETTDGARYASR
                     LDDYPSRGPAGDPMTHAELWTKFADCAERSLPRANLAAAFNTLMGIATLRTIADLTTQ
                     LQPEQARAA"
     gene            complement(5403..6710)
                     /locus_tag="VHX39_05720"
     CDS             complement(5403..6710)
                     /locus_tag="VHX39_05720"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990652.1"
                     /translation="MANVERVPCTRRVRTIQNTSLLLIFIICVVNYMDRGTLSVANPL
                     IRNELGLSIAEMGVLLSAFLWPYAFTLLVAGAIVDRGKPRRVLTISLIVWSIAQGAAG
                     FIASYGQFLLARALLGVGEAPMFPTAARVVKDWYHENDQALGVGIWNGAPSLGTAIAP
                     ALLTPLMLVFGWRWMFIIMAGVGVVLAAVWYAVYRDFNAETLDEMDRHYLYAGGEAPE
                     SHPVHAAAWGKLFSFRATWGLILGFFGNVYIGWLFIAWLPGYLEMQRHMSIPKTGFVA
                     SVPFLFGLVGSILGGYLADRLTSRGMTSIASRKLLTVIGMVAMSLATFVAAETASNFI
                     AVASISVAIFFGFSASGTSWSLANACAPPSYAASLGAIMDFGGFIGGALAPMVTGFVV
                     QATGSFTPALLVAGAIGLCSAAAYVVFIPAEPIRTTTLARGLA"
     gene            complement(6936..>7868)
                     /locus_tag="VHX39_05725"
     CDS             complement(6936..>7868)
                     /locus_tag="VHX39_05725"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3990653.1"
                     /translation="VACLDLVSNGRVEFGMGEGASITELGPFGRQMEDKQAVWEDGVR
                     CVLPMFKDGGWEYDGPYFKFPLRNVLPKPIQKPHPPLWVACSQLETIEMAGRCGIGAL
                     GFQFLSAEMAHAWVHAYYNSFVLRQKKLADYQSNCNIAMVSYFMCAETDEEARRRADG
                     VTFFQFSLAYYSSSRNRERAAPGTVSLWEEYLKWKAENPELAEKALTGGLIGSPETIR
                     KKLRRFESSHVDQIILLNQAGKNTHPHICESLELFAREVMPEFTAKEPEHQEWKRKVL
                     AREIELEDIDTTPYKDRAGVGKGVAINRLATAAA"
BASE COUNT         1421 a         2327 c         2673 g         1447 t
ORIGIN      
        1 ctggatgacc cgaaaggtct gtagtaccca cacggcatca aggtcgagcc gatcttgtgt
       61 tccatccaca accggaaggt cagaacaata ctcgacaaga gcgatgatat accccgactc
      121 ttcgggaacc cgaaaaattc cttgccatcc agccctaagg cgattctgct ccctggatga
      181 tccgccctca cttcctggac ccggaatcgc gacgcgatct gatcgaactg gcgcgtgacg
      241 gctcggccgc gcatcggctg gcccggcgcg ccaatgccct ggtgctgctt gacgatggaa
      301 tgagctgtgc ggccatcgcc aaggtgctgt ttctcgacga tgacacgatc cgaacctggt
      361 accagttgta tcagcaagac gggatcgaag gtttggcggg tttcggccac gaaggcggtt
      421 tctgccggtt gacggtggaa caacaagaca agctgaaagc gtggataaac gagaccctgc
      481 cacgcacaac acgccagatc ggcgcgtgga tcgcgctgga atgcgggatt gattaccaaa
      541 cccgatccgg cctgatcgcg ctgctgcatc ggctggatat ggaacatcgc aagccgaaag
      601 ccatctcacg caagttggat ccagtaaagc aggaaggctt catcaaggcc tacgaggtct
      661 tgatgaacca gctatccgcc gatgaagtgg tggtcttcgc ggatgcggtg catccgaccc
      721 atgcagtcag gcccgtaggc tgctgggcgc cgaaagagac gcctgtcgcg gttcaacaaa
      781 gcagtgggcg gaaccgtctg aatattcatg gcgccatcga cctcgagacc ggtcagacca
      841 tcatgaaaga tgtgctgacg gtcgacgccc tgagcacgat catgctgttg atggcgatcc
      901 aggcaaagta tccaggcctc gggtcgatcc atgtctttct ggataatgcc agataccatc
      961 atgcgaaatt ggtccagacg tggctggcgc agccgggatg ccggatcaaa ctgcacttcg
     1021 tccccgctta ttgcccgcat ctcaatccga tcgagcggtt gtgggggcta atgcacagac
     1081 atatcaccca caataaatgt tacgccatgt ttaaggattt ccgtatggcg atgctgacct
     1141 tcctgcgcga cagcgtaccc cggaactggc aaacattccg cgacgaggtc actgacaatt
     1201 ttcgtatcat aaacccaacg gggttccgga ttatcgcgtg aacggggtat atatcggatc
     1261 cgtgccgaac cggaactcac ccccagccat cctgctgcgc gaaagttacc gcgaggccgg
     1321 caaggtccgg aaacgcacgc tctgcaacct ctccgattgg gcactcgccc acattgaagg
     1381 cctgcgcggc gtgctcaagg gcggcaccgt tatcgcccct gatcgcgacg ccattaccgt
     1441 cacacgctcg ctgccgcatg gccatgccgc cgccatcctc ggcaccgccc ggaaatcggc
     1501 ctcgacacca tcatcggccc cgcgggcaac cgatgccgcg acctcgtcct ggccatgatc
     1561 acggcgcgga tcatcgatcc cggctcgaaa ctgcccaccg tacgggggct ttcccccgag
     1621 accgcgacgt ccagcctggg cacgctgctc aatctgggcg tggtcgatga ggacgagctt
     1681 tacaccgcgc tcgactggcc gggcgaacgc caatccgcca tcgagacgac gctggccagg
     1741 cggcatctgc gacatggcac gctggtgctt taccacctct cctccagcta catggaggga
     1801 agctgctgtc cctggcccat cgcggtgaca gccgggacgg ccgcaagcat accttgcaaa
     1861 ttgtctatgg gctgctctgc gcgctcgacg gctgcccagt cgccagccgg ctgaccgctt
     1921 tgcgtggcat cagtccgctt cgcggcctga ttgagttatt tgacggcaac accggcgatc
     1981 cggcgacgct cgccgcgcaa atcgccaagc tgaaacagcg cttctggctc gatcgtgtcg
     2041 tgctggtggg tgatcgtgac atgatcaccg tggcccggtt gaccgaagac gtcaaaaccg
     2101 ccgggttcga ttggatcacc gcgttgcgag ccccgccgat caaggatctt gtgaaaggcg
     2161 gggccttgca gttgtcgctg ctcgacgagc gcgccatggc cagcatcacc aaccaggact
     2221 ctccgggtga gcgtctgatc gtttgccgca atcgcgatct cgccgccaag cgcacccgca
     2281 agcgcaagga gctgctggca gccatcgaac ccgatctcgc gcgtatccgg ccaccgcacg
     2341 ccaacgccag ccgctgcgtg gcatcatcga catcgtgctg gccgtgggcg gcgtgatcga
     2401 caagcataaa atgcgcaaac atttcgatct gaccatcacc gatacgagct tcggctttgc
     2461 gcgcaaaacc ggcgcgatcg aagcggaggc cgccacggat gaaatttata tcgtgcgcat
     2521 cagcctcggt tccgaggtca tggacgacgc ggccaccgtg cgcagctaca aatccctgtc
     2581 ccgggttgag cgcgccttcc gctgcatcaa gaccgtcgat ctccaggtcc gcccggtccg
     2641 tcgctggctg gagggccggg tccgggctca cgtcttgctg tgcatgctgg cctactacct
     2701 cgaatggcac atgcgccggg cgcgcgcgcc gctgctgttc gacgacaccg ataaagaagc
     2761 cgctgaggcc gcacggaaaa gccccgtcgc caaggctcaa tgctcgccag cggcgatccg
     2821 caagcagacc accggcctga cgccggatgg cctaccggtg cacagcttcc acacactgct
     2881 cgccgatctc gagacactgg cacgcaacac catcgtcgtc gcgattacac ccgatctgcc
     2941 gtcgtgcgtg atgacccgcc caacccccgt ccaacgccgg gcgttcgagt tgctcgacct
     3001 ggcattgtag ccagtaacgc aagcactaat ataagaattg ttgtttttca gtggtttatg
     3061 ttattgcgaa gagggaagtt cgggctaagg ggccttgcgg atgatccatt tcggcttgct
     3121 ggtgaggacc ttggcggatt tttcctcggc gaactggttg gcggcgcgca tgacgtcggg
     3181 ccagtcctgg ttgtagtcgt cgccgaccag aaatccgccg ggggtcagga tttcccagta
     3241 ggtacgggcg tcttgcagca catcctcata gtcgtgcgag gcgtcgatgt ggatgaggcc
     3301 ggccctgatc ccgaggcggc gcatcaattc gcccgcgacc atggatgtct gtgccagcgg
     3361 cacgatccgg tcctgcgcgc cgcagcggac gacgttgctg aggaactgct cgtaaagcat
     3421 gggcatgccg aagcggaagg ggatcaggcc ggaaaaggcg gatttggggt cccagtgctc
     3481 gacgctgccg aggaaggtgt ccacgccgat gacggcgccg gccaggccgt ggcgcttcat
     3541 cacgttggcc aaatagatgg tcgaggcgcc tttccagacg ccgacgtcga tcaccacgct
     3601 cgggcgcagg ccgctgatga tttcctcgaa ggaggtgtgt tcgctgttcc agccttgaag
     3661 gtcctcggcg aaggtcgggg cgaacccgct gtagatgttg gtgccgtgga tgcggcgcat
     3721 gatttcggcg tgtatcgatc ccgctgcttc ggccacgatg gggtacgctc ctgagtgttc
     3781 gcggccacgc ttagcctaac ggattggcgg ctgtcatcca tgcaagatgc ttcgcgtgat
     3841 tcacaccttc cggcctgcgg cctcaggcga tcacggctcg atgtttgatc gcgtgattca
     3901 cgccttgcgg cctgcggcca caggcgatca cgctcaggcc gcgcgtgcct gttccggttg
     3961 cagctgtgtg gtgaggtcgg cgatcgtgcg cagggtggcg atccccatca aggtgttgaa
     4021 ggccgcggcc aggttggctc ggggtaggct gcgttcggcg cagtcggcga atttcgtcca
     4081 gagttcggcg tgggtcatcg ggtcgccggc ggggcctcgg ctggggtagt cgtcgaggcg
     4141 ggaggcatag cgggcgccgt cggtggtttc gacgatgatc tcggtgcccc agtcttcggc
     4201 catgtcgggg tggggacggg catcgaggcg ctgcatcagc gcgcggacgg tggggtcgaa
     4261 gggggcgttg ccctcgaagt gggacagttt gacggcgcgg tcggtgaggg ctcgggcgac
     4321 gcagtattgc atgctgaact tggcggcgag cggggtgcgc gggtcgggat tgttggtgtg
     4381 cggcaggcgg cgggggtgcg gcagcacggt gatgcgggcg acgcgttcgg ggtgcaggtc
     4441 gtggcggtgg gcgaggtcga tcatccgtcc gatcgacggg tgagtgctgc cgcagcatgg
     4501 gtagggcttc aggccaggat cgccggcacc gccgcactcg aacgggttgt accaggcgtc
     4561 caggatgcgg gcggtgtcgt aggtgccggg gccgttgaag acgtcgagga agccttgctt
     4621 gtgctcgaac gcggcggggt tggcggtgaa gccctgctgc gccatcagcg cggcgaacag
     4681 gccgtcgcgg acgccgtggc cgacgtgcag gggcttggtc atggtgccga aattggcctt
     4741 gaggccggcg gcgaaggagg cggccatgcc cagggcgatg gcggtctggt cgatggacaa
     4801 atgcagcagg cttgcggcgc cggcgacggt gccgaagatg ccgagcgtgg cggtggggtg
     4861 ccagcctttg tcgtagtggt ggtggtgtac gccgcgggcg atgcggcact cggtttcaaa
     4921 gccggcgacg taggcgagga cgaggtctcg gccgctgctg cccagggatt cggccagggg
     4981 gatcagggcg gggaccagca tggcggaggg gtggccgccc atcgagccgg cgacgtcgtc
     5041 gtagtccagc gcgtgggagg cggtgccgtt gaccaaggcg gcgtccagca cgctggtgcg
     5101 acgtgtggtg cccaggatca gcgccgggcc gggtgcggcg gcgatgccgg ggactttcag
     5161 caggatgcgc gggccgtcct cctgaatgcc ggcgagggtg acgccgacgg tgtccacgaa
     5221 ggcgctggtg gtccaggtga ggacgtcagg cgtgatgtcc tcgtagcgga gggcatggat
     5281 gcgctgggcg atctgggttg ccagggtggt catggacggt ccccttgttc ctgggtggtt
     5341 gccgatcgta ggccgagtgg atcgagcgtg gccagggtca gaggtggggg accgtccttg
     5401 ggtcaggcca atccgcgggc aagtgtcgtg gttcggatcg gttcggcggg gatgaagaca
     5461 acataggcag cggcggagca caggccgatc gcgccggcca ccagcagcgc cggggtgaac
     5521 gatccggtgg cctggacgac gaagccggtg accatcgggg ccagcgcgcc gccgatgaag
     5581 ccgccgaagt ccatgatggc gccgagggac gccgcatagc ttggcggagc gcaggcattg
     5641 gcgagcgacc aggaggtgcc ggaagcactg aagccgaaga agatcgccac cgagatcgag
     5701 gcgacggcga tgaagttgct ggcggtctcg gccgcgacga aggtggcgag cgacatcgcg
     5761 accatgccga tgactgtcag cagcttgcgg ctggcgatcg aggtcatgcc tcgggaggtc
     5821 agccggtcgg cgagatagcc gcccaggatg ctgccgacca ggccgaacag gaatggcacg
     5881 gaagcaacga atccggtttt cgggatgctc atgtggcgct gcatttccag gtagccgggc
     5941 agccaggcga tgaacagcca accgatatag acgttgccga agaagcccag gatcagtccc
     6001 caggttgctc ggaagctgaa cagtttgccc caggcggcgg cgtggaccgg gtgcgattcg
     6061 ggggcttctc cgccggcata caagtaatgc cggtccattt cgtccagcgt ttcggcgttg
     6121 aagtcgcgat agaccgcata ccagacggcg gcgaggacga cgcctacgcc ggccatgatg
     6181 atgaacatcc agcgccagcc gaacaccagc atcagcgggg tgagcaaggc cggggcgatc
     6241 gcggtgccaa gcgaaggggc gccattccag atgccgacgc ccagggcctg gtcgttttcg
     6301 tggtaccaat ctttcaccac gcgcgccgcg gtggggaaca tcggcgcctc gccgacgccc
     6361 agcaacgccc gagcgaggag gaactggcca tagctggcga tgaatccggc ggcaccctgg
     6421 gcgatcgacc agacgatcag cgagatcgtc agcacgcgcc ttggcttgcc gcgatcgacg
     6481 atggcgcccg ccaccagaag ggtgaaggcg tagggccaga gaaatgccga gagcagcacg
     6541 cccatctcgg cgatcgaaag gccgagttcg ttgcggatga gcggattggc gacggacagt
     6601 gtgccgcgat ccatgtagtt cacgacacag atgataaaga tcagtaacaa actggtgttc
     6661 tggattgtcc ttacgcgccg ggtacaagga acccgttcca cgtttgccat ggcaacctcc
     6721 ctgttcgttc acccgtctga ggtgcgggtg tcacggatgc ggcggcgtgg cggtcgggca
     6781 agcgttggac gttactggtt cccacgacgc ctaattgcgg catgagccgg cgtggagggt
     6841 tcagtcaaga taaaggcacg tgatccaact cacgatcttg agagtgatag acatcatggt
     6901 tcggggttgc tggacctcga accatgatgg atgggtcatg ccgcggcggt ggccaggcgg
     6961 tttattgcga cgcctttgcc aacgccggcg cggtccttgt agggggtggt gtcgatgtcc
     7021 tccagttcga tttcacgagc gaggaccttg cgcttccatt cctggtgttc gggttccttg
     7081 gcggtgaatt ccggcatgac ctcgcgggcg aacagttcga ggctttcgca gatgtgcggg
     7141 tgggtgttct tgccggcctg gttcagcagg atgatctggt cgacgtggga ggattcgaag
     7201 cggcggagct ttttgcggat cgtctcgggg gagccgatca ggccgccggt cagggctttc
     7261 tccgccagtt cggggttttc cgccttccac ttcaggtatt cttcccacaa gctgaccgtt
     7321 ccgggggcgg cgcgttcgcg gttgcgggag ctgctgtagt aggccaggga gaactggaag
     7381 aatgttacgc cgtcggcgcg ccggcgcgcc tcttcgtcgg tttcggcgca catgaagtag
     7441 ctgaccatgg cgatgttgca gttggactgg tagtcggcca gtttcttctg ccgcagcacg
     7501 aaggaattgt agtaggcgtg gacccaggcg tgggccattt ccgctgagag gaactggaag
     7561 cccagggcgc cgatgccgca gcggccggcc atctcgatcg tttccagttg ggagcaggcg
     7621 acccagagcg ggggatgcgg cttctggatc ggcttgggca ggacgttacg cagcgggaat
     7681 ttgaaatagg ggccgtcgta ttcccagccg ccgtccttga acatcggcag cacgcagcgg
     7741 acgccgtcct cccagaccgc ctgcttgtcc tccatctgcc gcccgaacgg ccctagttcg
     7801 gtaatgctcg caccctcacc catgccgaac tccacccggc cattgctgac cagatcgagg
     7861 cacgcgac
//
LOCUS       DATAVD010000311         5210 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_401665, whole genome shotgun sequence.
ACCESSION   DATAVD010000311 DATAVD010000000
VERSION     DATAVD010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5210
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_401665"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(437..1153)
                     /locus_tag="VHX39_05730"
     CDS             complement(437..1153)
                     /locus_tag="VHX39_05730"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX3990654.1"
                     /translation="MNMSNVKALCFDTGGTILDWHTGMRTALAAVGARHGVERDWAEL
                     ANEFRRRSLKLIVNHGEHAPATMTFDDAHRDALDQVLADNGLGVFSEQERRTLWWDTI
                     HGLKTWPDFPDSLARLRGKFMCVSFTLLSFRIVMDTARQNGISWDAVISCEAIGKYKV
                     LPEAYKTCARFLQLDPSECCMVACHNFDLNAAKGCGYRTAFVRRPDEWGPAGPPDPEP
                     HPQHDLVVASFPELAEKLGA"
     gene            complement(1260..1655)
                     /locus_tag="VHX39_05735"
     CDS             complement(1260..1655)
                     /locus_tag="VHX39_05735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990655.1"
                     /translation="MSDVTVIVRPVIEGTRQALVLTEDRLGHYPEFRAFFVRTFDLDR
                     VGLSEPGFVRAPSGLAYALVFVGRSGEPFPSGLEINAIVEALEPLDDTAVDTDLWAIL
                     GWMIGGVGAPWTVEDLHATGRLYRIPAAG"
     gene            complement(1655..2575)
                     /locus_tag="VHX39_05740"
     CDS             complement(1655..2575)
                     /locus_tag="VHX39_05740"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3990656.1"
                     /translation="MTVSALENIDGFRDKWPFAARYARVNGWRMHYVDEGAGDPILLL
                     HGNPTWGFLYRDVIPPLVSAGYRVIVPDMIGFGLSEKPAREQAHSLDGHIANLTGLVR
                     QLDLQRLMVVCHDWGGPTGLGFAMSNPDRVRALTVMSTWAWPTPPAEFHTRLFPWRMM
                     HAPLVGPYLLGRHNVLARRGVYLSVVDRERFRREAQPVYEAVMPDAETRLLTWVWPRW
                     IPLDDTARAQARFAWLEAELAKSRLPTLIIWGREDEVFDAATFAERFKRLLPHADGPH
                     MVTGRHFLQEDSGREIAGLIAAFLDRQGGA"
     gene            complement(2586..3428)
                     /locus_tag="VHX39_05745"
     CDS             complement(2586..3428)
                     /locus_tag="VHX39_05745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990657.1"
                     /translation="MPAGHEPRSDPVPAITEAAATGETAAIFADIRQVLGVDVVNLIW
                     RHLATIDGALPWAWATLCPLYADGSVIGEATALHKALVLPPMPAIPAEVFAALGLGPG
                     DMTAIRDVLAAYDHTNAMAAVALTALRARLDGRTPHDAAAAEPTPVAAAARIGLPKLL
                     DLTDMQRETAALVTTLNGLGTRRPGAVLASMYRHLAHWPPYLSFAWLLLAPLDSDGRL
                     EGAIEQARHAASVRADRLLVRLAASPPPPEQAAAISSAIEPFAGDVIVKMLVICAFLR
                     RVTA"
     gene            3897..4154
                     /locus_tag="VHX39_05750"
                     /pseudo
     CDS             3897..4154
                     /locus_tag="VHX39_05750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032492304.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
     gene            complement(4240..4833)
                     /gene="gspM"
                     /locus_tag="VHX39_05755"
     CDS             complement(4240..4833)
                     /gene="gspM"
                     /locus_tag="VHX39_05755"
                     /inference="COORDINATES: protein motif:HMM:NF040576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspM"
                     /protein_id="HEX3990658.1"
                     /translation="MLDHLPEGRRGQFAALALLAVVFGVVWIAVAAPLLGWHAERTER
                     LAERRQLLDHMEQIVAALPALRQEAGRPGSDLPPPTALLGGATDAIAGATLQSVMQDM
                     AASAGATLASSEALPGDQQGGFRRIRLRVAVHGDWPQLIALLRLANESPLRLLVTSLE
                     LHATAQPQSNGSAPIEASFVVQGFRLGTESKPVGAAE"
     gene            complement(4895..>5210)
                     /locus_tag="VHX39_05760"
     CDS             complement(4895..>5210)
                     /locus_tag="VHX39_05760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990659.1"
                     /translation="LQAIFVLAAPPAVNSSHDSPTQGGPPPKGTTAGAGEKPIVVGRD
                     GIVAGWTVTDIRDGSVALERDGRTMTLPLSYANDPVATHIVAPEAIVLLHDKRTNPFL
                     QP"
BASE COUNT          944 a         1715 c         1648 g          903 t
ORIGIN      
        1 acgatcatca aggtgggcct cgccaagccg tcgcactgac tgataccaac cggcattgat
       61 gttgacccat cggcagcgcc gtgcaaccgt catggcgagc gcaggctcgc catccatgcc
      121 tttgttttcg cacgtaaaag gcgtggatac cagcatgcgc cggcatgacg gacggggtca
      181 accgaagagt ctgcatcaac gccggttggt atgatatgag atggttgccg ttcagtctcg
      241 ccgtcatcga accttcgctc ctgaaaaagg gtgcgcctgt aaccttatcg ggcgtcctcg
      301 gaacgaagtc gtggcaaaat ggcaacgtac gacggcgccc ggcgggattt gcggcgcctc
      361 acagcgtcgt cgtcccgact ctcaacgagg cgggagccat cggtggcctg atccacaaca
      421 tcccggcggc gtatcgttac gccccgagct tttccgcaag ttcggggaag cttgcgacga
      481 cgaggtcgtg ctgtggatga ggctccggat cgggtgggcc tgcggggccc cattcatcgg
      541 gccggcgcac gaaagccgtc cggtagccgc accccttggc ggcgttgaga tcaaaattat
      601 ggcaggcgac catgcaacat tcgctgggat cgagttgcag gaacctggcg caggtcttgt
      661 aggcctcagg gaggactttg tatttgccta ttgcctcgca ggagatgacg gcatcccagg
      721 aaatgccgtt ttgcctggcc gtatccatga cgatgcggaa gctcagcagc gtgaaggaaa
      781 cgcacatgaa ctttccgcgc agccgcgcca gtgaatcggg aaagtccggc cacgttttca
      841 ggccatggat cgtatcccac cacaatgtgc ggcgttcttg ttcgctgaac acgccaagcc
      901 cgttgtcggc gagcacttga tcgagcgcgt cacgatgggc gtcgtcgaac gtcatcgtgg
      961 ccggcgcgtg ttcgccgtgg ttcacgatca gtttgagcga gcggcgacgg aattcgttgg
     1021 cgagctcggc ccagtcgcgc tcgacaccat gccgagcgcc aaccgcggca agcgccgtcc
     1081 gcataccggt atgccagtca agaatcgtgc cgccggtatc gaaacaaagt gccttgacat
     1141 tgctcatgtt cattgtgtcg ctcctctctt tgcaaatgca ccgcgtgccg gtgacggttc
     1201 cgaccggttg gtaaaaagtt tcatatgata tttccttcga tcgttccaac cggaccgatt
     1261 catcccgccg ccggaatgcg atacaaccgg ccggtcgcgt gaaggtcctc caccgtccat
     1321 ggcgcgccca cgccgccgat catccagccg aggatcgccc acaggtccgt gtcgaccgcc
     1381 gtgtcgtcga gcggttccag cgcttcgacg atcgcgttga tttccagccc cgacgggaac
     1441 ggttcgccgc tgcgcccgac gaacaccagc gcataagcca gcccggatgg cgcgcggacg
     1501 aaacccggtt cggacagccc cacccgatcg agatcgaagg ttcgcacgaa aaaggcacgg
     1561 aattcaggat aatgaccaag ccggtcttcc gtcagcacca gcgcctggcg ggtgccttcg
     1621 ataacgggcc tgacgatgac cgtgacgtca gacatcacgc gcctccctgc ctgtcgagga
     1681 aggcggcgat cagaccggcg atctcccgcc cggagtcttc ctgcaggaag tgccggccgg
     1741 tcaccatgtg cggcccatcg gcgtgtggca gcaggcgctt gaagcgttcg gcgaaggtcg
     1801 cggcatcgaa cacctcatcc tcgcgtcccc agatgatcag cgtcggcaac cgcgactttg
     1861 ccagttccgc ttccagccag gcaaagcggg cctgggctcg ggccgtgtca tccaggggga
     1921 tccagcgtgg ccagacccag gtcagcaagc gtgtctcggc gtcgggcatg acggcttcat
     1981 agaccggctg cgcctcccgc cgaaaccgct cgcgatcgac caccgagagg tacaccccgc
     2041 gccgcgccag gacgttgtgc cggcccagca gatagggtcc gaccagcggt gcgtgcatca
     2101 tgcgccacgg gaacaggcgg gtgtgaaatt cggcaggcgg cgtcggccag gcccaggtgc
     2161 tcatgacggt cagcgcacgc acccgatcgg gattgctcat cgcgaagccc aggccggtcg
     2221 ggccgcccca gtcgtggcag accaccatca ggcgttgcag gtcgagttgc cggaccaggc
     2281 ctgtcagatt cgcgatatgc ccatcgaggc tgtgcgcctg ctcgcgggcc ggcttctcgg
     2341 acaggccgaa gccgatcatg tcggggacga tgacgcggta tccggcgctc accagcggcg
     2401 ggatgacatc gcgatacagg aaaccccagg tcggattgcc gtgcagcagc aggatgggat
     2461 cgccggcgcc ctcatcgacg tagtgcatcc gccagccatt gacccgcgcg tagcgggcgg
     2521 cgaacggcca cttgtcccga aacccgtcga tgttttccag agcgctgacg gtcatgtcct
     2581 gcctcttatg cggtgacgcg gcggaggaat gcgcagatca ccagcatttt cacgatcaca
     2641 tccccggcga acggctcgat ggcggagctg atcgccgcgg cctgctcggg cggtggcggt
     2701 gaggcggcca gccggaccag caatcggtcc gcccgaaccg atgccgcgtg ccgcgcctgt
     2761 tctatcgcgc cttccaaccg cccatcgctg tcgagcgggg cgagcagcag ccaggcaaac
     2821 gacagatacg gcggccagtg ggcaagatgg cggtacatgc tcgccaggac cgcgcccgga
     2881 cgccgggtgc cgagtccgtt cagcgtagtc accaacgcgg cggtctcgcg ttgcatgtcg
     2941 gtcaggtcga gcagcttcgg caatccgatc cgtgccgcgg ccgccaccgg cgttggttca
     3001 gcggcggccg cgtcatgcgg tgtccgccca tccagccgcg cgcgtagagc agtcagcgcc
     3061 accgccgcca tcgcattggt atggtcgtag gcggccagga cgtcccggat ggcggtcatg
     3121 tcgcccggac ccaggcccaa cgccgcgaag acctctgccg ggatcgcggg catcggcggc
     3181 agcaccagcg ccttgtgcag cgctgttgcc tcgccgatga ccgatccgtc ggcatagagc
     3241 gggcacagcg ttgcccaggc ccaaggcaag gccccgtcga tcgttgcgag atggcgccag
     3301 attaggttga cgacatccac gcccagcacc tgccggatat cggcgaaaat cgccgcggtt
     3361 tcgccagtcg cggcggcttc ggtgatggcg ggaaccgggt cggaacgcgg ttcgtggccg
     3421 gcaggcatga atgcttcctc tctgctcccc atcattcaca acgctctgtt ctatatcgtt
     3481 cgtactagaa tggaccggat gtccatcgga agcaatcccg tgacccgccc ggctcgcgga
     3541 ggatgaaaaa gcctcacgag acacgtcgat cttttgcacg tggccggacc tcatcgtcca
     3601 cgctgatcag tccacctcgg gcaagcgaga tgcagccgag gatatgtcat tggcgaccac
     3661 cgctgtccgc aaggtgacga gtcttccggg cgatctcgag acttataccg atcgcccttg
     3721 atgttgatcc atcggcagcg ccgtgcaacc gtcatggcga gcgaaggctc gccacctatg
     3781 tctttgtttc cacacgtaga aggcgtggat accggcatgc gccggcatga cggacggggt
     3841 caaccgacat gacggacggg gtcaaccgaa gagtctgcat caatgccggt tggtattacg
     3901 tgttcggcca atccgacatc atcgactatg cgacagcccg ccgatgcgag gaaccgattt
     3961 caacggtcat cactgagagc accgtgcaat ggctgctgca tcggcggatg aatgcccaac
     4021 agcagatgct ctggtcgccg aggggcgccc gtttgatgct gaaagtgcgg acctccgtcg
     4081 tgaacggcac cctcgatcgg gaccatgccg tcgctgaacg ttgggcccgc cgtccgtttc
     4141 ggagagcggc ctgacccccc cacgtcctgg acggcctcag ccagattgac gcccatctgg
     4201 ccggctagcg ccacacatcc cggacatcct catgctctcc tattctgccg ccccgaccgg
     4261 cttgctctcg gttcccagcc ggaacccctg cacgacgaag ctggcctcga tcggagccga
     4321 accgttgctc tgtggctgcg cggtggcgtg cagttccaga ctggtcacca gcaatcgaag
     4381 cgggctttca ttcgcaagtc gcagaagcgc gatcaattgc ggccaatcgc catgcaccgc
     4441 cacgcgtagc ctgatgcgac gaaaaccgcc ctgctggtcg ccgggcagcg cttcggaact
     4501 cgcgagtgtc gcgccagcgg acgccgccat gtcctgcatg acgctctgca gcgtcgctcc
     4561 ggcaatcgcg tcggtcgcgc cgccgagcaa tgcggtcggc ggtgggaggt cagagccggg
     4621 ccgccccgct tcctgccgca gcgccggcag cgcagcgacg atctgttcca tatgatcaag
     4681 caactgccgc cgttccgcca accgttccgt ccgttccgcg tgccagccaa gcagcggggc
     4741 cgccacggcg atccaaacca cgccgaacac gaccgccagc agcgccaagg cggcgaactg
     4801 tccccgccgg ccctccggca gatggtcgag cacgccggtc aagacacgaa ccgggcgccg
     4861 ttcacgcgca ggctggtccc ataagccggc atggtcacgg ctgcaggaaa gggtttgtac
     4921 gcttgtcatg cagcagcaca atggcctccg gcgcgacgat atgtgttgcg accgggtcgt
     4981 tggcatagct gagaggcagc gtcatggtgc gtccgtctcg ctccagcgcc accgagccat
     5041 ccctgatgtc agtgactgtc caccccgcca cgatgccgtc acggccgacg acgatcggct
     5101 tttcaccggc acccgcggtc gtgccctttg gcggagggcc gccctgggtt gggctgtcgt
     5161 ggctggaatt gaccgccggc ggagcggcca ggacgaagat ggcttgcagg
//
LOCUS       DATAVD010000312         4352 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1331622, whole genome shotgun sequence.
ACCESSION   DATAVD010000312 DATAVD010000000
VERSION     DATAVD010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4352
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1331622"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..405
                     /locus_tag="VHX39_05765"
     CDS             <1..405
                     /locus_tag="VHX39_05765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990660.1"
                     /translation="LHSLLNGASAAVNLSKVILMKHDQRNACDQFGADDENCDEISGA
                     FSQPWCRCGFDGCGYSVGVHFTSVPISMQAMPISARNTPKPENAAVTAFAFQRGNGSV
                     VLLVASAGTIIFVELWRAGSRRGGDCCVRSSK"
     gene            complement(729..1910)
                     /locus_tag="VHX39_05770"
     CDS             complement(729..1910)
                     /locus_tag="VHX39_05770"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990661.1"
                     /translation="MLIAVVAMFLQQTCGSVARVLPAVLAPLIIHELNADPSWVGVYF
                     GLVAIAALVGQLGSGGFIIRHGAIRMSQIALLSTGAGLAVAVIGGTAGFVLSALIGNG
                     IAAVATPASSQLLGRWAVRRYAPFAFSITQTAIPVGILLGGSIAPTLAQSVGWRGTML
                     VSAVACWCFVLVLQPLHGRLDTEASPSHRIHLSDFYTTITGVLAVTELRGLSFACFAF
                     NGLQAVFIAYFVTYLVALGYNLVAAGALFSAVIAIAIPCRILWGWVGSFYVAPRLVMS
                     GLAFGMAVSVALTGAFTEAWPAIAIGVVTGALSATAMSWHGILLSESARLAPAGRVGS
                     VTGGVLSFGQMGAFLCPSVFSLLLRLTGGYTAGWVVCGIPAVLVGMNLLRKTSQVERR
                     L"
     gene            complement(2000..3805)
                     /locus_tag="VHX39_05775"
     CDS             complement(2000..3805)
                     /locus_tag="VHX39_05775"
                     /inference="COORDINATES: protein motif:HMM:NF040606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-heme-cytochrome C peroxidase"
                     /protein_id="HEX3990662.1"
                     /translation="MSRVHATLMAITASILFAAAAHAQPTACATNVACLDQGWKAADR
                     TTFYTTVQGSHIMPYVWFKALRRLDVDEPFAADQLARYGYIHSDSSTGLPIGFVIDGT
                     PAQGQIGMTCAACHTGQLEYQKSGVTHAIRLDGAPALSDFQQFLTDLRDASGATIDQP
                     GRFTAFAASVLGSGNTPAKAAQLKKDFGAWAQQFSEFMNKSLPPSPWGPGRLDAFGMI
                     FNRVTARDINVAGNFKVADAPVSYPFLWNAHRQDHTQWNGGVPNGYYITALARNSGEV
                     FGVFADFTPTVARQATDFTPKLIDYHNNSIVYSGLQTLEEKIADLKPPPWPQDIFPLN
                     QDMAAKGKDLFDSNCGKCHNPQTSKKAPNAWDTPVVAVGTDPRMFTNSQNESDPGIFT
                     DAALPPPEFLKRYPACPTTADCASNVDLLASSVVGGLVADALSKKMFDPIAIRQNGVV
                     RALARDLGSLQGGQNPKDLTASAVQHLGDLQTVINTRLGNMYKSQPATAIGAAYESRV
                     LQGIWATAPYLHNGSVPNLWELLTPPAQRKTTFMVGSRLFDPKNVGYATDTSPFKTGK
                     FVVDPSNGNGNGGHDFGTGLTDDQKWQIIEYMKMM"
     gene            complement(3831..>4352)
                     /locus_tag="VHX39_05780"
     CDS             complement(3831..>4352)
                     /locus_tag="VHX39_05780"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX3990663.1"
                     /translation="NTGGLLIGAVETTSHAAVNAIEILLQRPDVLAQACAAAKGEDMA
                     AFDGFVYEALRFKPAFPYFFRTCEQDTVIGRGSDRETTVAKGTTVLAVTHSAMFDPRS
                     VSNPERFDPTRDRGNEFHFGLGLHECLGLAIGQVMIPEIVRQSLRLRGLTAAAVDYKG
                     GPVPEAWQWTWQH"
BASE COUNT          897 a         1302 c         1309 g          844 t
ORIGIN      
        1 ctccattcgt tgctgaacgg agcgtccgcg gcggtcaacc tatcaaaagt cattctaatg
       61 aagcatgacc aacgtaatgc gtgcgatcag ttcggtgccg acgacgagaa ctgcgatgag
      121 atatccggcg ccttctctca gccatggtgc cggtgcggat ttgacggatg cggatattct
      181 gttggcgttc atttcacatc agtccccata tcgatgcagg caatgcctat ttctgcacgc
      241 aatactccga aaccagagaa cgcggcggtt accgctttcg ccttccagcg cggaaacggc
      301 tcggttgtgc ttttggttgc atccgcaggc acaattattt tcgttgaact gtggcgtgcg
      361 gggagccggc gaggcggcga ctgctgcgtg cgcagcagca aataagtcgg gaggccaatc
      421 aaggaatggc aagggagcca tcggtcatac cccttcaaag tcgttacgga accgctctgg
      481 cgcgccatac cattaacgca ggtagccacg ttttcgttcc ggcctgacac gcgtttggcg
      541 cgtggaattc tgtgggtgac ttcccagtac gtttcgcccg catcattttc tgcctcggac
      601 aggtcctcag ggttcggtga caacagagaa acctgtcgca gacttcgttg aggtttcgtt
      661 tcgaccggag atgcgtcgtc agcgagcgca atcgctacga atattcattg caatatcgtt
      721 gcctgatgct acaggcgacg ttcgacctgt gacgtttttc gtaacagatt cattccaacc
      781 agcacggccg gaatgccgca gaccacccat ccggcagtgt agccgccggt cagacgcagc
      841 agtaacgaaa ataccgacgg acacagaaac gcgcccattt gtccgaacga caggacgccg
      901 ccggtgaccg aacccacccg gccggccggc gcgagccgag ccgactccga cagcagaatg
      961 ccgtgccagg acattgccgt ggcgctcagc gcgccggtca ccacgccgat cgcgatggca
     1021 ggccaggcct cggtaaacgc gccggtcagc gcgacgctga ctgccatgcc gaacgccaga
     1081 ccggacatca ccagccgtgg tgcgacatag aagctgccaa cccagcccca gaggatccgg
     1141 cagggaatgg cgatggcgat cacggcggag aacaacgctc ccgctgccac gagattgtaa
     1201 ccaagcgcca ccagataggt cacgaaatag gcgatgaaca ccgcctgcag cccattgaac
     1261 gcgaaacacg caaaggacag cccgcgtaac tccgtcaccg ccagcacgcc ggtgatcgtg
     1321 gtataaaagt cggacaaatg gatccggtga gagggtgacg cctcggtatc gagacgccca
     1381 tgcaacggtt gcagcaccag cacaaagcac caacaggcca cggcgctgac cagcattgtg
     1441 ccgcgccagc ccaccgattg ggcgagggtg ggggcgatcg acccgccgag caggatgccg
     1501 accggaatgg cggtctgcgt tatcgagaaa gcaaagggtg cgtatcgccg cacggcccaa
     1561 cggccgagca gttgggaact ggcgggtgtc gcaacggcgg cgatgccgtt gccgatcagc
     1621 gccgacaaca cgaagcccgc agtgccgccg atgaccgcga ccgccaggcc tgcgccggta
     1681 gaaagcaatg cgatctggct catgcggatc gcgccgtgac gaatgataaa tccgcccgaa
     1741 ccgagttggc cgaccaatgc ggcgatcgcg acaaggccga aatacactcc aacccaggac
     1801 ggatcggcgt tcagctcatg gatgatcagt ggcgccagca ccgccggcag cacgcgggcc
     1861 accgagccgc aggtttgttg cagaaacatc gccacgacgg cgatcagcat gcggctcacg
     1921 tggcttgctt cccttggacc gatctgttcc agcccaatgg ggacgcggcg tcaacgctta
     1981 tgccactgtg acgatgcggc tacatcattt tcatatattc gatgatctgc catttctggt
     2041 cgtcggtcag accggtgccg aaatcgtggc cgccgttgcc gttgccattg ctggggtcga
     2101 ccacgaattt gcccgttttg aacggcgaag tgtcggtcgc atatccgacg tttttggggt
     2161 cgaacaggcg gctgccgacc atgaatgtcg tcttgcgttg cgccggcggg gtcagcagct
     2221 cccaaaggtt gggcactgag ccgttgtgca ggtagggcgc cgtagcccag atcccttgca
     2281 atacgcgcga ttcgtaggcg gctccgatgg cggtcgcggg ttggcttttg tacatgttgc
     2341 cgagccgggt gttgatcacc gtttgcaggt cgcccaaatg ttgcacggcg gacgctgtga
     2401 gatcctttgg attctgaccg ccctgcagtg accccaggtc cctggccagc gcacgaacga
     2461 caccattctg gcgaattgcg atcggatcga acatcttctt gctgagcgcg tcggcgacca
     2521 gccctccgac gaccgagctg gcaagaagat cgacattcga cgcgcaatcg gccgttgtgg
     2581 gacacgccgg gtaccgcttg agaaactccg gcggcggcaa tgccgcatcc gtgaagattc
     2641 ccggatcgga ttcattctgc gagttggtga acattcgcgg atcggttccg accgccacca
     2701 ccggtgtatc ccacgcgttc ggcgcttttt tcgaagtttg cggattgtga catttaccgc
     2761 aattactatc gaagagatct ttgcccttgg cggccatgtc ctggttgagg gggaagatat
     2821 cctgcggcca tggcggtggc ttcaggtccg cgattttctc ctccagagtc tgcaggccgg
     2881 aatacacgat agagttgtta tgatagtcga tgagctttgg cgtgaagtcc gtcgcctgcc
     2941 gcgccacagt tggtgtgaaa tccgcaaaga cgccgaacac ttcaccggaa ttgcgggcca
     3001 gcgcggttat gtaatatccg tttggtacgc cgccgttcca ttgagtatgg tcctgccggt
     3061 gcgcattcca taaaaacggg tagctgacgg gagcatccgc aaccttgaaa tttccggcca
     3121 cattgatgtc acgagcggtg acccgattga agatcatgcc gaacgcatca agccgtcccg
     3181 gaccccaggg tgagggcggt aggctcttgt tcatgaactc gctgaattgc tgcgcccagg
     3241 ctccgaagtc cttcttgagt tgcgcggcct ttgccggcgt gttgccgctg ccaagcactg
     3301 acgctgcaaa tgccgtgaac cggcccggct gatcgatcgt cgcgcccgac gcatcccgca
     3361 aatcggtgag aaactgctga aaatccgaca gtgccggcgc gccgtccagg cggatcgcgt
     3421 gggtcacacc gctcttttga tactcgagtt ggccggtgtg gcaggcggca caggtcatgc
     3481 cgatctgacc ttgcgccggc gtgccgtcga tcacgaaacc gatcggcagg ccggtcgagc
     3541 tgtcgctgtg gatatagccg taccgggcca attggtccgc cgcgaaaggc tcatccacgt
     3601 ccagccggcg cagtgccttg aaccacacgt aaggcatgat atgcgagccc tggaccgtgg
     3661 tatagaacgt ggttcggtcg gctgctttcc agccttgatc gagacatgcg acattggtcg
     3721 cgcacgcggt gggctgcgca tgggcggcgg cggcaaacaa gatcgacgcg gtgatagcca
     3781 taagtgtcgc gtgaactcgg ctcattgttt ttgtcccccc aaccgtcagt tcaatgctgc
     3841 cacgtccatt gccaggcttc cgggactggc ccgcccttgt aatcgactgc tgccgcagta
     3901 agcccgcgca gccgcaggct ttggcgcacg atctccggaa tcataacctg gccaatggcg
     3961 agaccgagac actcgtgtag tccgagaccg aaatgaaact cgttaccccg atcacgggta
     4021 ggatcaaaac gttcgggatt agagacagag cggggatcga acatcgcgga atgggtgacc
     4081 gccagcacgg tggttccctt ggcgaccgtc gtttcacgat cggagccgcg gccgatcacc
     4141 gtatcctgtt cgcaggtgcg gaagaaatac ggaaatgcgg gtttgaaacg cagtgcctca
     4201 tagacaaaac catcgaacgc tgccatatcc tcaccttttg ccgctgcaca cgcctgggcc
     4261 agcacgtcgg gccgttgcaa caggatctca atggcgttga ctgcggcatg cgaggtcgtc
     4321 tcgaccgcac caatcaacaa ccctccggta tt
//
LOCUS       DATAVD010000313         1967 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_960735, whole genome shotgun sequence.
ACCESSION   DATAVD010000313 DATAVD010000000
VERSION     DATAVD010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1967
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_960735"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(214..1590)
                     /gene="murC"
                     /locus_tag="VHX39_05785"
     CDS             complement(214..1590)
                     /gene="murC"
                     /locus_tag="VHX39_05785"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR01082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEX3990664.1"
                     /translation="MFATSQHAHFIGIGGIGMSGIAEILLNQKMKVSGSDLRRSPVTD
                     RLAQLGAIIYEGHEAGHVAGATVVVTSSAVGTTNPEIVEARALKIPVIQRAEMLAELM
                     RLKYGIAIAGMHGKTTTTSMVASVLGAGGLDPTVVVGGRVDAMGSNARLGTTQYLVAE
                     ADESDRSFLKLSPILAVVTNLDREHMDCYSDMDDVERAFLAFMDKVPFYGAVTACIDN
                     PQLAAILPRAHRRVFTYGTAPAADYRLQRLDAAPDCYSRFQVTTATGVLGPFNLHVPG
                     RHNVLNATAAIAIAHQLEVDAVRIAEGISRFRGVDRRFQLRGQANGVAVIDDYGHHPT
                     EIRATLSAARECAYKRIHVLFQPHRFTRTLDLLDQFASAFTDADTVIVLPIYAASEAP
                     IPGVTAEVLAQMIAGPRVEFAPDFASAISAIVANAGQGDLILTLGAGSVSQLAPQILA
                     ALESVHVA"
BASE COUNT          394 a          535 c          682 g          356 t
ORIGIN      
        1 tccgaaactg ctgcagcggc gacctgttgc aagtagtttg ttatcccccc ccccgcatgg
       61 cccaaaaaca agaaaatgcg cgggatgcgg tggaaagtcg cccaaagagc acaaagcgct
      121 ttccttggta accacatact aaggcggaat acggcgtcgg tccagaattg tttgcaatcc
      181 ggacacacgc gagtcgcgca ggcggaaacc tgatcaggcg acgtgaactg attcgagagc
      241 cgcaagaatc tgcggagcga gttgactgac gctgcccgcg ccgagggtga ggatcaggtc
      301 gccctgtccg gcattggcaa cgatggccga aatggcagat gcgaagtcgg gcgcaaactc
      361 gacgcggggg ccggcgatca tctgggccag cacttcggct gtcacgccgg ggatgggcgc
      421 ctcgctggcg gcatagatgg gaaggacaat cactgtatca gcgtcggtga aggcgctcgc
      481 aaactggtcg agaaggtcaa gagtcctggt gaaccggtgc ggctgaaaaa gcacatggat
      541 gcgcttgtag gcgcactcgc gcgcggcgga cagcgtggcc cgtatttcgg tgggatggtg
      601 gccatagtcg tcgatgaccg cgacgccatt agcctgtccg cgaagctgaa agcggcggtc
      661 cacgccgcgg aagcggctga tgccttcggc gatcctgacc gcgtccacct caagctggtg
      721 cgcaatagca atagcggcag tggcgttcaa cacgttatgg cggccgggca catggagatt
      781 gaagggcccg aggaccccgg tcgcggtcgt gacctgaaaa cgggagtagc agtccggtgc
      841 tgcgtccagc cgttggagac gatagtccgc cgcgggagcc gtgccatatg tgaagacgcg
      901 gcgatgcgcg cgaggcagga tggcggccag ctgcggattg tcgatgcagg cggtgacggc
      961 gccgtaaaac ggcaccttgt ccatgaaggc gaggaaggcg cgctccacat cgtccatatc
     1021 gctgtagcag tccatgtgtt cgcgatcgag attggtcaca accgcgagga tgggcgagag
     1081 cttgaggaag gagcggtcgc tttcgtcggc ttcggcgacc aggtactggg tggtgccgag
     1141 acgcgcgttg gagcccatgg catcgacccg gcccccgacc acaacagtcg gatcgagtcc
     1201 gcctgcgccg agtacgcttg cgaccatcga ggtcgtcgtg gtctttccat gcatgcctgc
     1261 gatggcgatg ccgtacttga ggcgcatgag ttcggccagc atctcggcgc gctgaatgac
     1321 aggaatcttg agggcgcgtg cctccacgat ttcagggttg gtggtgccca cagcggagct
     1381 ggtgacgacg accgtcgcgc cggcgacatg gcccgcttcg tgtccctcgt aaatgatggc
     1441 gccaagctgc gcgaggcggt cggtgaccgg gctgcggcgc aagtctgagc cggagacctt
     1501 catcttctga ttgagcagga tctcggcaat gccgctcatg ccgatgccgc cgatgccaat
     1561 gaagtgtgcg tgctgcgaag tggcgaacat ttggattcga aaggttaggg taccattcgc
     1621 ggctgttttc gatggttttg aggcgcttta tggccctgtt tggaccccta aaccggccga
     1681 tctgaacgcc gcgatcctgc gaaagctggg ccgatttgtt ttcgggctga ggccgcaacc
     1741 ttctgatgga caggtgtttg aacagggcct aaccggcgca ttgggcaggc agcaggatcc
     1801 aagcctcctg ggaaagccgg gatggactct tcgctggaga gcgcgggtca ggtgggatgg
     1861 agggaatatg aaaaacacgc ggaaatggag gctgggtgcg gcgctgatag cgggtggatt
     1921 gggcctgggc acaacggcgg cctgaccaac cggatgacaa aatggct
//
LOCUS       DATAVD010000314         2080 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_215288, whole genome shotgun sequence.
ACCESSION   DATAVD010000314 DATAVD010000000
VERSION     DATAVD010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2080
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215288"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..423
                     /locus_tag="VHX39_05790"
     CDS             <1..423
                     /locus_tag="VHX39_05790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HEX3990665.1"
                     /translation="LIHGVAIWAWHAPAFFDAALANVVFHRLQHLSFLATAVLFWWSV
                     LRRSNAGVAAWHLFITMLHTSVLGALMALAPRVLYEVQTAAAADWGLTPLEDQQLAGI
                     IMWVPAGTVYAGAVLALTTVWIRHSGRTGRVTDAVRTV"
     gene            404..811
                     /locus_tag="VHX39_05795"
     CDS             404..811
                     /locus_tag="VHX39_05795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX3990666.1"
                     /translation="MLFALSRHSWSVLAAVLIALSAAGAAMTWSAQHESEAVARAMTG
                     GDASRAPLLIRRYGCAGCHAISGIPGGDGRVGGPLTNIKHRVYVGGVLPNSADNLVRW
                     IVSPQAFSPRSAMPATGISEAEARDVAAYLYSQ"
     gene            complement(818..1735)
                     /locus_tag="VHX39_05800"
     CDS             complement(818..1735)
                     /locus_tag="VHX39_05800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX3990667.1"
                     /translation="MRAGAWLAILVVTAGVAGTAAWVLSAPRPAFSKDPAGALEQPGD
                     PAKGQLVFAAGDCASCHASPGQPDRLRLGGGLALASPFGTFRVPNISMDPVDGIGTWR
                     TIDLANALLSGVSPDGSHYYPVFPYPSFAKMQLGDVRDLMAYLRTLPAVAGRPPPHDL
                     ALPFRIRRLIGFWKLLFFDRTPVVPDPNRNGGWNRGQYLVEAMSHCDECHSSRNVLGA
                     IKPGTRFAGGEDPEGVGFVPNITPTRIGAWKEEDIAEMLKSGNTPDQGRVGASMSDVV
                     TNTAMLPQSDRDAIAAYIKSLPARPTPRP"
BASE COUNT          360 a          649 c          664 g          407 t
ORIGIN      
        1 ctcatccacg gcgttgcgat atgggcctgg catgcgccag catttttcga cgccgcgctc
       61 gccaatgtgg tatttcacag gctccagcac ctcagtttcc tggcgaccgc ggtgctgttc
      121 tggtggtcgg tgcttcgacg cagtaacgcc ggagtagcgg cttggcacct gttcatcacg
      181 atgctgcata cgagcgtgct cggtgccttg atggcgcttg cgccgcgcgt gctctatgag
      241 gtccagaccg cagcggcggc agactgggga ttgacgccgc tggaagacca gcagcttgcc
      301 ggaatcatca tgtgggtgcc tgcgggaacc gtctatgccg gcgcggttct tgctctcacc
      361 accgtatgga tacggcattc gggcagaacg gggagggtca cggatgctgt tcgcactgtc
      421 tagacattcg tggtcggtcc tcgcggcggt tctgatcgct ctgtcggcgg cgggcgctgc
      481 tatgacctgg agcgcgcagc acgaatccga agcggttgca cgcgctatga caggtggcga
      541 tgcctcgcgg gcgccccttc tcatccgccg atacggttgt gccggatgcc acgccatctc
      601 cggcattccc ggcggcgacg gccgggtcgg cggtcccctg acgaacatca agcatcgcgt
      661 ctatgtcggc ggcgttctgc caaactcggc agacaatctg gtccgctgga tcgtgtcgcc
      721 gcaggccttt tcgccgcggt cggcaatgcc ggcaaccggc atctcggaag ctgaagcgcg
      781 tgacgtcgcg gcgtatcttt attcgcaatg aaagccgtta tggtcgcggt gtcggccgcg
      841 cgggcaggga cttgatgtag gccgcgatgg cgtcccgatc gctttgcgga agcatcgcgg
      901 tattcgtcac gacgtcgctc atggaagctc ctacacgccc ctggtccggc gtgttgccgc
      961 tcttgagcat ctcggcgata tcctcctctt tccacgctcc tattcgcgtt ggcgtgatgt
     1021 tcggaacaaa accgacacct tccggatcct cgcctcccgc aaaacgagtg cccggcttga
     1081 tcgcgccaag cacgttccgg gaggaatgac actcgtcgca atgcgacatc gcttccacca
     1141 ggtactggcc tcgattccag cccccgttac ggttcgggtc aggaacgacc ggcgtccgat
     1201 cgaagaacag gagcttccag aagccgatca ggcgtcggat gcgaaagggc agcgccagat
     1261 cgtgcggcgg tggtctgcct gcgacggcgg gcagcgtgcg caagtaggcc atcaggtcgc
     1321 gcacgtcgcc gagttgcatc tttgcaaagc ttggataggg aaatacgggg tagtagtgcg
     1381 aaccgtccgg cgaaaccccg ctcaacaggg cgttagccag gtctatggtc cgccatgtcc
     1441 cgatgccgtc gacagggtcc attgatatgt tgggcacgcg gaatgtgcca aagggcgacg
     1501 caagcgccaa gccgccgccg agccggagcc ggtccggttg gcccggggag gcatggcagg
     1561 atgcgcaatc gccggcggcg aataccagtt gcccttttgc cgggtcccct ggctgctcca
     1621 atgcgccggc tgggtctttc gaaaatgccg ggcgcggcgc actaaggacc cacgccgctg
     1681 ttcctgcaac tccggcggtg acgaccagga tcgccagcca ggcgcccgca cgcattgccc
     1741 gtctccatgc cacgacccca acaatgctgc aggcagtaac cggttccgtg gtggctttgc
     1801 ggagtcgcca agatcttttt atggacatcg caacggcatt gggcgccgcg gcgatgttga
     1861 acgtgaggac tacgtgctcg tctctacgac ggcgacacgt caaagcgacg agcactgcgc
     1921 ggtagtcgcc gcaaatcgac caagccggtc gcctcgacaa tgaacctggg gacttctatc
     1981 cctatcgata aaatttcgcg gttcggcctg tcgcccgtca ggcgccaggt aagtaccgag
     2041 gctactaacc cggcgtgaac tgagctaggt cgttgatgcc
//
LOCUS       DATAVD010000315         4597 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1146460, whole genome shotgun sequence.
ACCESSION   DATAVD010000315 DATAVD010000000
VERSION     DATAVD010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4597
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1146460"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1386
                     /locus_tag="VHX39_05805"
     CDS             <1..1386
                     /locus_tag="VHX39_05805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3990668.1"
                     /translation="KTLWDLLDDDYGMEPAEATQKLVADIKTGLLEPAEEAALPVVPP
                     AAASPSDSAATKTHETRLWLSVREVAMREIDPARSHLVSEFRQHLIASLIRFREWQVT
                     DPPATTIKSAPGTAGRYEVQMVAYQTGRAVQILITLKETDSNLYIWTESFELELENWF
                     QYQRHVVRRIAMGLNIHLSAERLNRFSDQPDISLGLYDRWLRCQTQVRTFDPRFWSRL
                     KEQFAEIVREAPGFTRAHGGLADLNNIEHIVHPGVFRSPDRERAALGYAREAVRLDPS
                     DMRAHLCLAWSHSMMKQYDQAIMHLEVAHELNPNDSWHTISAANLLAFCGKLDRASEL
                     AALAIDMTLAPSLTHWAYHAEIHYLRGDYEAAIRDADLSQNVIWDIPAWRAAALAKLG
                     RTEEAKIEAARFIERIRAHWYGSQEPTEEAIMKWQLHIHPICRREDWLHLHDGLTRAG
                     LPTQAAKHGIW"
     gene            complement(1398..1793)
                     /locus_tag="VHX39_05810"
     CDS             complement(1398..1793)
                     /locus_tag="VHX39_05810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990669.1"
                     /translation="MKVNFDNTEQNWRLWGELVELWIYNLHPKPTDTVQLVNQMTAHG
                     IKNPSVPGDPNRKVMFYSYTDADPLVMLLPTEDMLKAARKTVLAGEVYPLPVFYDDAY
                     SGARKILSEDEDTLLAACRVGEYTINNCC"
     gene            1904..3199
                     /locus_tag="VHX39_05815"
     CDS             1904..3199
                     /locus_tag="VHX39_05815"
                     /inference="COORDINATES: protein motif:HMM:NF014661.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcaO-like family protein"
                     /protein_id="HEX3990670.1"
                     /translation="MPDSDNTISFQLRAAAVALAGSARDPATTRLLRALGYDDGNLDA
                     TVSRIRLLRSAALFRRLFRLPVPDAPGLTFFGAEADPACLGPHNAGLPVGGFAGSGLD
                     PGRAFESCVGEGIEYLSQFAQPDDRFADCAETLDPVVRGFVEAVLSACGVPADRAIDW
                     MPVRRLTDGAASWYPADLCLRRAARDFVPPMKLSTGCAAGVTREAATLRGLLELIERD
                     AVALWWRGGRRGRSMPVAGETAALLGRVRAGQAGRETTLLDITSDLGVPVVAAFSTRP
                     DGFGFAIGTAARVDFAEAARSAIFEMCQSELSLHVIAAKQREAGQAGLNESDLRQLAR
                     ASVLDRNGCLLLRADDGAAAPRVVSGETVDAMVRRLAERGVVAWSVDLTRPAFGVPVV
                     RVIAPGLQAEPSEIVGDRLGRAIGETGGGAQYSGGVALL"
     gene            complement(3352..4449)
                     /locus_tag="VHX39_05820"
     CDS             complement(3352..4449)
                     /locus_tag="VHX39_05820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3990671.1"
                     /translation="MTETRDLIVIGGGLVGGAIAWGAQSKGASVVLLDEGDIAYRAAR
                     GNFGLVWVQSKGAGMPPYAQWTRQSAALWPELAAALHDATGTDTALHQPGGLAFCLSD
                     EEFEQRAALIHRMHNESGDIGTRMLSRDEVRQMVSGLGDEVTGASFCPIDGHASPLHL
                     LQALHQTLDYRPNRHVERIDARPALFTVHAGGETYIAPRIVIAAGLGSRDLAPMVGLH
                     MPVSPLQGQIIVTERMRTLLDYPTHVLRQTDEGTVMLGDSQEDVGFDTTTKVEVLKKI
                     ADRNTRIFPALKDASIIRMWAALRVMSPDGFPIYEQSERFPGAFAATCHSGVTLAGAH
                     ALALAPAILAGVLPDGLSAFASTRFKKTTAT"
BASE COUNT          768 a         1355 c         1568 g          906 t
ORIGIN      
        1 aagacgctgt gggacctgct ggacgacgat tacggcatgg agccggcgga ggcgacgcag
       61 aaactggtcg ccgacatcaa gacgggactg ctggagcccg ccgaggaagc ggcgctgccc
      121 gttgttcccc cggcggcggc cagcccatcg gattcggcgg cgacgaaaac gcatgagacc
      181 cgcctgtggc tgtccgtcag ggaagtcgcc atgcgcgaga tcgaccctgc gagatcccat
      241 ttggtgtccg aatttcgtca gcaccttatc gcttcgctga tccggttccg ggagtggcag
      301 gttaccgatc cgccggcgac gacaatcaaa tcggcgcccg ggaccgcggg acgttacgaa
      361 gtgcagatgg tcgcctatca gacgggccgc gccgtgcaga tcctgatcac actgaaggag
      421 acggattcca atctctacat ctggaccgaa agcttcgaac tggaacttga gaattggttc
      481 cagtaccaac gacacgtcgt gcgccggatc gcgatgggtc tgaatataca tctgtcggcc
      541 gagagactta atcgcttttc cgaccagccg gacatctcat tgggtcttta tgatcgttgg
      601 ttacgctgcc agacccaggt gcgcacgttc gatccccgat tttggtcgcg cctgaaggaa
      661 cagttcgccg agatcgttcg tgaagctccg gggtttacgc gggcgcatgg cgggttggcc
      721 gacctcaaca acatcgaaca catagttcac cctggcgtat tcaggtcgcc ggaccgggag
      781 cgtgcggcgc tggggtacgc ccgtgaggct gttcgactgg atccgtcgga tatgcgtgcc
      841 catctctgcc tcgcctggtc tcatagcatg atgaaacaat atgatcaggc gatcatgcac
      901 ctcgaggtgg cgcatgagct taacccgaat gactcctggc acacgatttc cgcggcgaat
      961 ctgctggcat tttgcggcaa gctcgaccgc gcatcggaac ttgcggcact ggccattgac
     1021 atgacccttg cgcctagcct cacccactgg gcctatcacg ccgagatcca ctatctgcgc
     1081 ggtgactacg aggccgcgat acgagatgcc gatttgtccc aaaatgtgat ctgggacatc
     1141 ccggcgtggc gtgccgccgc attggccaag ctcggccgga cggaggaagc gaagatcgaa
     1201 gcggcgagat tcatcgagcg tattcgagcg cactggtacg gctcgcagga gccgacggag
     1261 gaagccatca tgaaatggca gttgcatatc cacccgatct gccgccgcga agattggctg
     1321 catcttcacg acggcctgac ccgagccggc ctgccgacgc aagcggcgaa acatggcatc
     1381 tggtgacggg caacgggcta acagcaattg ttgatggtat attcacccac gcggcacgcc
     1441 gcgagtaacg tgtcttcgtc ctccgatagt attttgcggg cgccactata ggcgtcgtcg
     1501 taaaagacgg gcagcggata gacttcaccg gcaagaaccg tctttcgcgc tgctttcagc
     1561 atgtcttcgg tcggaagcaa catgaccagt ggatcggcgt cggtgtagga gtagaacatc
     1621 actttccggt ttgggtcgcc ggggacgctc gggttcttta tgccgtgcgc tgtcatctgg
     1681 ttgaccaatt ggacggtatc ggtgggtttc ggatgcaggt tatagatcca caactcaacg
     1741 agttcgcccc acaggcgcca attctgctcg gtattgtcaa aattaacttt cattggcacc
     1801 ctcattttct gcgttacttt aaggctggca caacctcgga cgaacttgcc gaagcgaaac
     1861 gtgggccatt agccgtgatt cgaacgtgag tggaaaacag ccaatgcctg attcggacaa
     1921 cacgatttcg ttccaactgc gcgctgcggc tgtggctctg gccggaagcg ctcgcgatcc
     1981 agcgacaacc cggctgctgc gcgcccttgg atacgatgac ggcaacctag acgcaactgt
     2041 cagtcgcatt cgcctgttgc gttcggccgc actattccgc cggctgttcc gcttgccggt
     2101 gccggacgca ccgggtttga cgttctttgg cgccgaggcc gaccccgctt gtctggggcc
     2161 gcacaatgcg gggcttccgg tgggcggctt tgcgggttcg gggctcgatc cggggcgtgc
     2221 tttcgagtcc tgtgtcgggg agggtatcga atatctcagt cagttcgcgc aaccggacga
     2281 tcggttcgcc gactgtgcgg agacgctcga tccggtggtg cgtggctttg tcgaggcggt
     2341 cctgtcggcg tgtggcgtgc ccgctgaccg tgccatcgac tggatgccgg tgcggcggct
     2401 gacggatggt gcggcgtcat ggtacccggc cgatctgtgc ctgcgccggg cggcacgcga
     2461 tttcgttccg ccgatgaagt tgagcaccgg atgtgccgcc ggcgtgacgc gtgaggccgc
     2521 gacgctgcgg gggctgttgg aactgatcga gcgagacgcc gtggcgttgt ggtggcgggg
     2581 ggggcggcgt ggccgttcga tgccggttgc cggtgaaacc gccgcgttgt tgggtcgggt
     2641 tcgggcaggg caggcgggtc gggagaccac gttgcttgat atcaccagcg atcttggcgt
     2701 tccggtggtc gcggcgtttt ccactcggcc ggatggtttc ggtttcgcga tcggaacggc
     2761 ggctcgggtt gatttcgcgg aggccgcccg ttcggcgatt ttcgagatgt gccagtcgga
     2821 actcagcctg catgtgatcg cggcgaagca gcgggaggcg gggcaggcgg ggctgaacga
     2881 gagcgatctg cggcagttgg ctcgggcatc ggttcttgac aggaacgggt gcctgttgtt
     2941 gcgggcggat gatggggcgg cggcgccccg ggtggtttcc ggtgaaaccg ttgatgcgat
     3001 ggtccggcgg ttggccgaac gcggggtcgt tgcgtggtcg gtcgatttga cccggcctgc
     3061 gttcggggtg ccggtggtgc gcgttatcgc gcctggattg caggcggaac cgagtgagat
     3121 tgtcggcgac cggttgggtc gggctatcgg cgaaaccggt ggcggggcgc aatattcggg
     3181 tggtgtggcg ttgttgtagg gcgtcgttgg cagtgcagca aaggcgtgga tggcgtgcct
     3241 tcgcacgcca tgacggacgc gcggacgtgc cttcgcacgc catgacggac gcgcggacgt
     3301 gccttcgcac gccatgacgg acgcgcgggg gtgccttcgc gcgcgatgtc gttacgtggc
     3361 ggtggttttc ttgaagcggg tgctggcaaa cgccgaaagg ccatccggta acacacccgc
     3421 aaggatcgcc ggggcgaggg ccagcgcgtg tgctccggcc agggtcacgc cgctgtggca
     3481 ggtggcggcg aaggcgccgg ggaatcgttc cgactgttca tagatcggga agccgtccgg
     3541 cgacatcacc cgcagcgccg cccacatgcg gatgatcgat gcgtccttca atgcggggaa
     3601 aattcgtgtg ttgcggtcgg cgattttctt caatacctcg accttggtgg tggtgtcgaa
     3661 gccgacgtcc tcctggctgt cgcccagcat gacggtgcct tcgtcggtct gccgcagcac
     3721 atgggtgggg tagtccagca gcgtccgcat ccgttcggtg acgatgatct gcccctgcaa
     3781 cggagacacc ggcatgtgca gcccgaccat cggcgccagg tcgcggctgc ctagccccgc
     3841 cgcgatgacg atacgcggcg cgatatacgt ctcgcctccg gcatgaacgg tgaacagggc
     3901 aggccgagcg tctatacgtt cgacgtgacg gttggggcgg taatcgaggg tctggtgcag
     3961 cgcctgcaac agatgcagcg ggctggcgtg gccgtcgatc gggcagaagc tggcgccggt
     4021 cacttcgtcg cccaggcccg acaccatctg gcgcacttcg tcccgcgaca gcatccgcgt
     4081 gccgatgtcg ccgctttcgt tgtgcatgcg gtggatcagg gccgcgcgtt gctcgaattc
     4141 ctcatcggac aggcagaacg ccaggccgcc gggctgatgc agcgccgtat cggttccggt
     4201 ggcgtcgtgc agcgccgcgg ccagttccgg ccacagcgcc gccgattgcc gggtccactg
     4261 cgcgtagggc ggcatacccg cgcctttgct ctgcacccat accagcccga aattgccccg
     4321 ggcagcccgg taggcgatgt caccctcgtc gagcagcacc accgacgcgc ccttggactg
     4381 cgcgccccag gcgatggcgc cgccgaccag tccgccgccg atgacgatca ggtcgcgggt
     4441 ctcggtcatg gcgcgccgct tagtatcgca tcggagaagc gcgatacgtc gcaggtttgt
     4501 ctgagtgacc gagtcacgcg ggaaatcgcg gtcactgcgt gactcgcgct tcaccgagat
     4561 cgggcaccag gatgacgccg gcggccgcca tccggtc
//
LOCUS       DATAVD010000316         1523 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2820876, whole genome shotgun sequence.
ACCESSION   DATAVD010000316 DATAVD010000000
VERSION     DATAVD010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2820876"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            19..>1523
                     /locus_tag="VHX39_05825"
     CDS             19..>1523
                     /locus_tag="VHX39_05825"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3990672.1"
                     /translation="MYQDFRDRNQVFSGMMCRYSMTATVGVSSQSEAVGIELVSGNYF
                     PMLGIGAAAGRVFTAADDLHAGAHPWAVLSNAYWRSRFAADPRAIGQTIRLNNYPLTI
                     VGVLKPGFDGMEPGLPAEIFVPIMMAQSVRPSFTDMFNRRQRWVNVFGRLKPGFDIAR
                     AKAGMQPLFHQIIDNEVLAPAFRTASPQAKQAFLRMSINVMPGSQGNSYLRRTYEKPL
                     LVLMGVVALVLLIACANLASLYTARATARRKEIAIRLAMGSTRGRLVRQLLAESMLLS
                     LAGAAAGAGLAVVMVKALLGFLPVNITGYNISAAPDATALAFTAGLAVLAGVMFGLAP
                     ALQSTKPDIAPTLKDQAGSVASAGIGFRKVLVAVQVTFSLILLIGAGVFVRSLAKLQL
                     LDPGFRTRGLVQFTLNPRFVGYDPDRASAFFRRLDESLAASPGVRADGMADVAILAGN
                     EWDMWVTIEGYTAGSGEPPDVHFNAVTPGYFDALGIHLIAGRGFRVSDDQTA"
BASE COUNT          256 a          542 c          428 g          297 t
ORIGIN      
        1 aacgcgttgt cctaccccat gtaccaggat ttccgcgacc ggaaccaggt cttcagcgga
       61 atgatgtgcc ggtacagcat gaccgcgacc gttggcgtct cctcccaatc ggaagccgtc
      121 ggcatcgaac tcgtctccgg aaactacttc cccatgctcg gtatcggcgc ggccgccgga
      181 cgcgtattca ccgccgccga cgacctccat gcaggcgccc acccgtgggc cgtcctgagc
      241 aacgcttact ggcgatcgcg tttcgccgcc gacccgcgcg ccatcggcca gaccattcgc
      301 ctcaacaact acccgttaac catcgtcgga gtcctgaaac caggcttcga cggcatggag
      361 ccaggtctcc ccgcggagat cttcgtcccg atcatgatgg cgcaatcggt gcgtccttcc
      421 tttaccgaca tgttcaatcg ccgccagcga tgggtgaacg tcttcggccg cctgaagcca
      481 ggcttcgaca ttgcccgcgc caaagcggga atgcagcccc tgttccacca gatcatcgac
      541 aacgaggttc tggcgcccgc gttccgcacc gcgtccccac aagccaaaca ggcgttcctc
      601 aggatgtcca tcaacgtgat gcccgggtcg caaggcaact cctacctccg gcgtacctat
      661 gaaaagccgc tactggtcct gatgggagtc gtcgcgctcg tattgttgat cgcctgcgcc
      721 aatcttgcca gcctgtatac cgcgcgcgcc accgcccgtc gcaaagagat cgccatacgc
      781 ctcgcgatgg gttccacgcg cggccgcctt gttcgccagc ttctcgccga aagcatgctg
      841 ctctccctgg ccggagcggc agccggcgcg ggccttgccg tcgtaatggt gaaagccctg
      901 ctcggatttc taccagtcaa catcaccggt tacaacatct ccgcagcgcc ggacgccacg
      961 gcgctggcct tcaccgccgg cctcgccgtg ctcgcgggcg taatgttcgg gcttgcgccc
     1021 gcgctccagt cgacgaagcc cgatatcgcg cccactttaa aagatcaggc cggatcggtc
     1081 gcatcggccg ggatcggttt tcgcaaggtg ctcgtcgcgg tccaggtcac cttctcgctc
     1141 atcctcctca tcggagcggg cgtgttcgtt cgcagtctgg ccaaactgca actgctcgat
     1201 cccggctttc gcacgcgcgg tctggtgcaa ttcacgctca atccccgctt cgtcggctat
     1261 gatcctgacc gcgcctccgc cttcttccgc cgcctcgacg aaagcctcgc cgccagtccc
     1321 ggtgtccgcg ctgacggcat ggcggatgtc gctatccttg cgggtaacga atgggacatg
     1381 tgggtcacca tcgagggcta taccgcggga tccggcgaac cgccggacgt gcacttcaac
     1441 gcagtcacgc cgggctattt cgatgcgctc gggattcacc taattgcggg gcgcgggttc
     1501 cgtgtcagcg atgaccagac tgc
//
LOCUS       DATAVD010000317         2141 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1146547, whole genome shotgun sequence.
ACCESSION   DATAVD010000317 DATAVD010000000
VERSION     DATAVD010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2141
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1146547"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            105..584
                     /locus_tag="VHX39_05830"
     CDS             105..584
                     /locus_tag="VHX39_05830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX3990673.1"
                     /translation="MPQVTLTVNGKQHTVEVENRTLLVELLREKLALTGTHVGCDTSQ
                     CGACVVHVDGISAKSCTMLAVQAAGTNVLTIEGLAAADGTLHPMQEMFREHHALQCGF
                     CTPGMVMSAIDLVNSHPDSITEQEIRDGLEGNLCRCTGYHNIVKAIAAAHPLMHGKA"
     gene            609..>2141
                     /locus_tag="VHX39_05835"
     CDS             609..>2141
                     /locus_tag="VHX39_05835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3990674.1"
                     /translation="MPFEGIGASVRRKEDARFLNGRGHYTDDINRPGQLYAYVKRSDR
                     PHAKINAIDTAAAAKAPGVAAVFTGADMAAESIGGLPCGWQIHNKDGSPMAEPPHPVI
                     AVGKVRHVGDPVAVVIAETKQQAKDAAELISIDYSDLTGVATMAAALAPGAATVHDDV
                     AGNVCYDWHIGDKAVVDSVFASAAKVVRLDLINNRLIPNAMEPRAAIGDYDVNSGEYT
                     LYTTSQNPHVIRLLMGAFVLHIPENKLRVVAPDVGGGFGSKIYHYAEEAIVTWASAKV
                     RRPVKWTAERTESFMSDAHGRDHVSTAEMAIDAQGTFLGLRVSTQANMGAYLSTFAPC
                     VPTYLYATLLAGTYKTPVIYCEVKAVFTNTVPVDAYRGAGRPEATFLLERLVDAVAHD
                     TGIDRVELRRRNFIPADAFPYQTPVALQYDSGDYQTTLAVALKNADWAGFETRRTAAK
                     AGGKLRGIGVSTYLEACGIAPSAVVGSLGARAGLYEVANIRVHPTGSVTVFTGSHSHG
                     QGH"
BASE COUNT          444 a          655 c          656 g          386 t
ORIGIN      
        1 acttcccggg tgcaaccgat tgcccgacac gccaccgctt gaccggcgca cggcgcatga
       61 ccacactcgg aacgggcgtt tggatgagat aaagggagag cgcgatgcct caggtcaccc
      121 tgacggtaaa cgggaagcag cacacggtag aggtggaaaa tcgcactctg ctggtggaac
      181 tgttacgaga aaaactggcg ctgaccggga cccatgtcgg ttgcgacacg tcgcagtgcg
      241 gcgcctgtgt ggtgcatgtt gacggtatct cggccaaatc gtgcaccatg ttggcagtgc
      301 aggcggcggg gaccaacgtt ctcaccattg agggccttgc tgcggcggac ggcacactgc
      361 atccgatgca ggaaatgttc cgcgagcatc acgctctgca atgcggcttc tgtacccccg
      421 gcatggtgat gtccgccatc gacctggtga acagccatcc cgacagtatc acggagcagg
      481 aaatccgtga tgggctggag ggcaatctgt gccgctgcac cggttatcat aacatagtaa
      541 aagcgatcgc ggccgcgcat ccgttgatgc acggcaaagc ataatcgcca gaacagggag
      601 ataacgccat gcccttcgaa gggatcggtg catccgttcg ccgaaaggaa gacgctcgtt
      661 ttctcaatgg ccgaggccat tacaccgacg atatcaaccg acctggccag ttgtatgcgt
      721 atgtaaaacg gtcagaccgg ccgcacgcaa aaatcaacgc tattgacacc gccgccgcgg
      781 cgaaggcgcc tggggtggcc gcggtgttta ccggtgccga catggcggct gaaagcatcg
      841 gcggcctgcc ctgcggctgg cagatccaca acaaggatgg ctcgccgatg gccgagccgc
      901 cgcatccggt gatagcagtc ggcaaggttc gtcacgttgg cgatccggtc gcagtggtca
      961 tcgccgagac caaacagcag gccaaggacg ccgccgaact gatatccatc gactactccg
     1021 accttaccgg ggtcgcaacc atggcagcgg ctttggcacc cggtgcagca accgtgcacg
     1081 acgacgtggc gggtaatgtt tgttacgact ggcatatcgg cgacaaggcc gtggtcgata
     1141 gcgtattcgc aagcgcggca aaggtcgtgc gcctcgattt gatcaacaac cggctgatcc
     1201 ccaacgccat ggagccgcgc gcggcgatcg gtgattacga cgtcaactcc ggcgaatata
     1261 cgctgtacac caccagccag aacccgcatg tgatccggct gctgatgggc gcattcgtgc
     1321 tgcatattcc ggagaacaag ctgcgcgtcg tcgccccgga cgtcggaggt ggtttcggct
     1381 ccaaaatcta tcattacgcc gaagaagcca tcgttacctg ggcttcggcc aaagtgcgcc
     1441 gtccggtcaa gtggacagcg gaacgaaccg aaagcttcat gtctgacgcg catggccgcg
     1501 atcacgtcag caccgccgaa atggcgatcg acgcccaggg cacgttcctc gggttgcgcg
     1561 tttcgacgca ggccaacatg ggcgcgtatc tctcgacttt cgcaccatgc gtgccgactt
     1621 atctctatgc cacgctgctt gccggaactt acaaaacccc ggtgatttac tgtgaggtca
     1681 aggcggtatt caccaacacg gtcccggtcg atgcctatcg cggcgccggc cggcccgaag
     1741 cgacattcct gctggaacgc ctcgtcgatg ccgttgcgca tgacaccggg atcgatcgcg
     1801 tcgaactgcg ccggcgcaat ttcatcccgg ccgatgcatt cccgtatcaa acgccggtag
     1861 cgctgcaata cgacagcggc gattaccaga cgacgcttgc tgttgccctg aagaacgccg
     1921 attgggctgg atttgaaact cggcgcacgg cagccaaagc cggcggcaaa ctgcgcggca
     1981 ttggcgtgtc gacctacctg gaagcctgcg gcatcgctcc atcggccgtt gtcggttcgc
     2041 tcggcgcgcg tgccgggctg tacgaggtcg ccaacattcg ggtgcatccg accggcagtg
     2101 tgacggtgtt caccggctcg cacagccacg gtcaggggca c
//
LOCUS       DATAVD010000318         1641 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_215733, whole genome shotgun sequence.
ACCESSION   DATAVD010000318 DATAVD010000000
VERSION     DATAVD010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215733"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..370
                     /locus_tag="VHX39_05840"
     CDS             <1..370
                     /locus_tag="VHX39_05840"
                     /inference="COORDINATES: protein motif:HMM:NF022646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2891 family protein"
                     /protein_id="HEX3990675.1"
                     /translation="SPCLAEADFMRRVLDKQAYREWLSGFLPGIPLNPVTQWLQPGVV
                     TDRADPKLAHIDGLNLSRAWMLEGIAHGVGPDDRRSGALLAAANSHREAALPAVTGEH
                     YEGGHWLGTFAVYLTSHAGY"
     gene            complement(373..1539)
                     /locus_tag="VHX39_05845"
     CDS             complement(373..1539)
                     /locus_tag="VHX39_05845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016846 - carbon-sulfur lyase activity
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019343 - cysteine biosynthetic process via
                     cystathionine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HEX3990676.1"
                     /translation="MSVEGDKQRFATRVIHGGQQPDPLTGAVMPPIYATSTYVQSSPG
                     VNQGYDYSRTRNPTRDALQAAVANLEGGSAGFAFASGMATTSTVLELLDSGSHIVAMH
                     DLYGGSYRLFENVRKRSAGLDVSLVDLTNSAALEAAIRPNTRMVWVETPTNPLLKLVD
                     LGAIAVIARKHGLISVCDNTFATPFVQRPLEHGFDIVVHSATKYLNGHSDCVGGVAVV
                     GGNASLQERLAYLQNAIGAISGPFDSFLILRGIKTLALRMERHCANALAIAQFLEKHP
                     KVERVYYPGLESHPQHALAKRQMTGGYGGIVTAVLRGTIDDARRVLERCHLFSLAESL
                     GGVESLIEHPGLMTHASIPAPVRASLGISDTLIRLSVGIEDLGDLTAELRHALG"
BASE COUNT          336 a          555 c          466 g          284 t
ORIGIN      
        1 gtctccgtgc ctcgcagagg cggacttcat gcgccgggtg ctggacaagc aggcctaccg
       61 cgaatggctg agtggttttc tgccgggcat tccgctcaac ccggtcacgc agtggttgca
      121 acccggcgtc gtcaccgatc gcgccgaccc gaagctcgcg cacatcgacg gtttgaatct
      181 cagcagagcg tggatgctgg aaggaatcgc gcacggcgtg ggccccgacg accgtcgcag
      241 cggcgcgctc ctggccgcag ccaacagcca ccgggaggcg gcgttaccag ccgtgaccgg
      301 cgagcactac gagggcggcc actggctcgg cacgtttgcc gtatatctga ccagtcacgc
      361 cgggtattag actcaaccca acgcgtgccg caattccgca gtcagatcac ccaggtcttc
      421 gatgcccacc gacagccgga tgagggtatc gctgataccc agtgacgccc gcaccggagc
      481 cggtatagac gcatgagtca tgagccccgg atgctcaatc aaactctcga cgccgcccag
      541 actctccgca agcgaaaaca agtgacagcg ctccaacacg cggcgcgcgt cgtcgatcgt
      601 ccctcgtaga accgccgtca cgatgccacc gtaaccgccg gtcatctgcc gcttcgccag
      661 cgcgtgttgc ggatggcttt cgagacccgg gtagtagacc cgctcgacct tcgggtgctt
      721 ctccagaaac tgtgcgatcg ccaacgcgtt ggcgcagtgc cgctccatcc gcagcgccag
      781 ggtcttgata ccgcgcagga tcaggaacga atcgaacggc cccgaaatag cgccgatcgc
      841 attctgcaga taagccaacc gctcttgcag cgacgcgtta cctccaacca ccgccacgcc
      901 gccgacgcaa tcggagtgcc cgttcaaata tttcgtcgcc gaatgcacga cgatgtcgaa
      961 gccatgctcg agaggccgct gcacaaacgg cgtggcaaac gtattgtcac aaacgctgat
     1021 caagccgtgc ttgcgagcaa tcactgcaat agcgcccagg tcgaccagct tcagcaacgg
     1081 attcgtcgga gtttccaccc acaccatccg cgtgttcggg cggatcgccg cctcgagcgc
     1141 ggctgaattc gtcagatcga ccagcgagac atccagacca gccgagcgct tgcgcacgtt
     1201 ctcgaacaat cgatagctac cgccatacag gtcgtgcatg gcgacaatgt gcgagccgct
     1261 gtcgaggagc tccaacaccg tcgaggtggt cgccatcccc gaggcgaacg cgaatccggc
     1321 gctgccgccc tcgagattcg caacagccgc ctgcaatgca tcccgagtcg ggttccgggt
     1381 gcgggaataa tcatatccct ggttgacgcc cgggctcgat tgcacatacg tcgaggtcgc
     1441 atagatcggc ggcatcaccg caccggtcaa cgggtcgggc tgctgtcctc catggatcac
     1501 ccgcgtggca aagcgttgct tatcaccttc gacactcatc agcttctccg ccgcagccag
     1561 ttcaacacat cgatacgggt gaccaatcct tggaacacat tgtccttcat gacaatcgcc
     1621 accaggccgc gcttgaagat t
//
LOCUS       DATAVD010000319         1715 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_776442, whole genome shotgun sequence.
ACCESSION   DATAVD010000319 DATAVD010000000
VERSION     DATAVD010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_776442"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..277)
                     /locus_tag="VHX39_05850"
     CDS             complement(<1..277)
                     /locus_tag="VHX39_05850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990677.1"
                     /translation="MAEILGLGCTHRPVMLRKNEEWTGMMKVTLDDPAMPAAMKDPAN
                     WPAQLREELGNDWGAGAAGRAREVYRRHFAETRQALDDFKPDLIVMWG"
     gene            complement(290..1159)
                     /locus_tag="VHX39_05855"
     CDS             complement(290..1159)
                     /locus_tag="VHX39_05855"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HEX3990678.1"
                     /translation="MKIGVFSTFMSPLATPAMIRDFGRRAEDIGLESIWMGEHVALFD
                     KNTFGYPSSKDGRIPMPAGGGMLDVTATFGFLAAVTSNVRFGTGVALVPQRNPIYTAK
                     ELCTLDWLTDGRIDFGIGVGWNKEEVEACGYRWEDRGARCDEFLEVMRRLWTEPVVDF
                     AGKWIKFETMRMDPKPIQRPHVPIIVGGYADAAFRRAVRFGAGWYGFNRDVASTKDML
                     NRLDAAFAKAGRTRDKNFEIIITPPLAMPNDAMQEYEALGVDRLVVNLGSQRPERVNQ
                     RMAEIEKLVKMAA"
     gene            1281..>1715
                     /locus_tag="VHX39_05860"
     CDS             1281..>1715
                     /locus_tag="VHX39_05860"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3990679.1"
                     /translation="MPRLNFGAFLAPHHPIGEHPMLQFRRDLDLVERLDNLGYDEFWC
                     GEHHSSGWEMIASPEMFLAAAGERSKRIKLATGVISLPYHHPFNVAQRMVQLDHMTGG
                     RAIFGSGPGALASDAHTLGVDPMVLRDRQDEAISVIRRLFNGE"
BASE COUNT          315 a          579 c          476 g          345 t
ORIGIN      
        1 cgccccacat cacgatcaga tcgggtttga aatcatcgag cgcctgacgc gtctcggcga
       61 aatggcgacg atacacctca cgcgcacggc cggcggcgcc ggcaccccag tcgttgccaa
      121 gttcctcgcg cagttgcgct ggccagtttg ccgggtcctt cattgccgcc ggcatcgcgg
      181 gatcgtccag ggtgaccttc atcatccctg tccactcctc attcttcctt agcatcactg
      241 ggcggtgggt acacccaagt ccgaggattt cagccatgtg ctttctccct tatgccgcca
      301 ttttaaccaa cttttcgatc tccgccatgc gctggttcac ccgctcgggc cgctggctac
      361 cgaggttcac caccagccgg tcgaccccca gcgcttcata ttcctgcatc gcatcgtttg
      421 gcatcgccag cggtggcgta atgatgatct cgaagttttt atcgcgcgtg cgaccggctt
      481 tggcgaaggc cgcatcaagc cggttcagca tgtccttggt gctcgcgacg tcacgattga
      541 aaccgtacca acccgcaccg aaccgcacgg cgcgccggaa cgccgcgtcg gcataaccgc
      601 caacaataat cggcacgtga ggccgttgga tcggcttggg gtccatccgc atggtctcga
      661 actttatcca tttgccagca aaatccacca ccggttccgt ccataaccgg cgcatgacct
      721 cgagaaactc gtcacagcgc gcaccgcgat cttcccaacg ataaccgcag gcctcgactt
      781 cttccttgtt ccaaccgaca ccgatgccga aatcgatgcg gccgtcggta agccagtcca
      841 gcgtgcacag ttccttggcg gtgtagatcg ggttgcgctg cggcaccaat gcgacgccgg
      901 taccgaaccg cacgttgctg gttaccgccg ccagaaaccc aaaagttgcg gtcacgtcga
      961 gcatgccgcc gccggccggc atagggatgc ggccgtcctt cgaactgggg tagccgaacg
     1021 tgttcttgtc gaacaacgcg acatgctcgc ccatccagat cgattcgagg ccgatgtctt
     1081 cggcacgtcg gccgaaatcg cggatcatgg ctggcgtcgc cagcggcgac atgaaggtgg
     1141 aaaacacgcc gatcttcatg ttggtactcc tggctattct ctgaacagtt aggccgcagg
     1201 ccggtccgta gcaatcctcc cgcacgtttt gcattgctgc gccaggcgct atgctcaatc
     1261 aacacccata ggagacccgc atgcctcgcc tgaatttcgg cgccttcctg gcgccccacc
     1321 atccgatcgg cgaacacccg atgttacagt tccgccgcga tctcgacctt gtcgagcggc
     1381 tggacaacct cggctacgac gagttctggt gtggcgagca tcattccagc ggctgggaaa
     1441 tgatcgcgtc ccccgaaatg ttcctcgccg cggcgggcga gcgttcaaag cgcatcaaac
     1501 tcgccaccgg cgtcatctcg ttgccgtatc accatccgtt caatgtggcg caacgcatgg
     1561 tgcagctgga tcacatgacc ggcgggcgag cgatcttcgg ctctggaccc ggcgccctcg
     1621 cgtccgacgc gcacacgctt ggcgtcgatc cgatggtcct gcgtgaccgg caggacgagg
     1681 cgatcagcgt catccggcgc ctgttcaacg gcgag
//
LOCUS       DATAVD010000320         2377 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1519932, whole genome shotgun sequence.
ACCESSION   DATAVD010000320 DATAVD010000000
VERSION     DATAVD010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2377
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1519932"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..275
                     /locus_tag="VHX39_05865"
     CDS             <1..275
                     /locus_tag="VHX39_05865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990680.1"
                     /translation="MCQLEDLGFCKKGEGGAFVQDGALGLNGRLPVNTHGGLLSQAHM
                     AGMNHIVELTRQLRGEAAAQVPDAEIGLVTGYGDMGDGAVAIMRRG"
     gene            279..689
                     /locus_tag="VHX39_05870"
     CDS             279..689
                     /locus_tag="VHX39_05870"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon domain-containing OB-fold protein"
                     /protein_id="HEX3990681.1"
                     /translation="MDAVYEKLVPSPTPETQPYWTGLNEGRLRLQRCADCGKVRHYPR
                     PMCDACWSMNTDWVDASGKGTVHSWTITHYAFHPALKGDLPYILLTIDLPEGVRMNAQ
                     ARGIDPSALRVGLPVTVAFDRVKDDLTLPVFEAG"
     gene            complement(694..2175)
                     /locus_tag="VHX39_05875"
     CDS             complement(694..2175)
                     /locus_tag="VHX39_05875"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3990682.1"
                     /translation="MRLVDLPRTSSFRLALRFLILFGVASSVLFGFLYWQTNHYIIGR
                     IDAWLAHEQTIFHPIDRSDLLQRLTAHVVADPTLERPLTLFDPVGMRLAGTPLTLTAA
                     ALAAMPQDAPFDFRFKQDGRPVSFRAVVHRRPSGDYLLVALDIDALHAFAAVLINAFI
                     WVAVITTLIGLAGAAFIGAGAVRRIDGVTQSIQRIVNGDLSERLPTHGQTDDLDRLAI
                     VINGMLGEIERLMQEVKGVCDNIAHDLRTPLTRLLAGMERMRRRAISSEDYAMAVDEA
                     IIETKDVLNTFAAILRISEVESGARRAGFTEADISEVVADAVEFYEPVAEARGVRLIQ
                     IAPDATPVMMRGDPSLLFEAVGNLVDNALKFTPGGGHVTVGCFARAGTIGFEVTDTGP
                     GIPASEAACVLRRFYRAESSRNTPGSGLGLALVAAVARLHGMDLAISDARPGCRITIA
                     RHENAFGPAELPVRAAEFGPDNAAGRAVAARRVVVEGTRNASR"
     gene            complement(2162..>2377)
                     /locus_tag="VHX39_05880"
     CDS             complement(2162..>2377)
                     /locus_tag="VHX39_05880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3990683.1"
                     /translation="EFRLLEFLMRHADQVVTRTMLFEEVWNYRTVEPTNLIDMHISKL
                     RRKLDSESTEPMIRTVRGAGYMLHAAG"
BASE COUNT          421 a          755 c          802 g          399 t
ORIGIN      
        1 tcatgtgcca actggaagac ctcggcttct gcaagaaagg cgagggcggt gccttcgtcc
       61 aggacggcgc cctgggcctg aacggccgcc tgccggtcaa cacccatggc ggcctgctgt
      121 cccaggcgca tatggccggc atgaaccaca tcgtcgaact cacccgccaa ctccggggcg
      181 aagcggccgc ccaggtcccc gacgccgaaa tcggcctcgt caccggctac ggcgacatgg
      241 gcgacggcgc cgtggccatc atgcggaggg gctgaacgat ggacgccgtt tacgaaaaac
      301 tcgtcccgtc cccaaccccg gaaacccaac cctactggac cggcctgaac gaaggccgcc
      361 tgcgtctgca acgctgcgcc gattgcggca aggtccggca ttatccgcgg ccgatgtgcg
      421 acgcctgctg gtcgatgaac accgactggg tcgacgcatc cggcaaaggc acggtgcata
      481 gctggaccat cacccactac gccttccacc cggccctgaa aggcgacctg ccctacatcc
      541 tgctgaccat cgacctgccc gagggcgtca gaatgaacgc ccaggctcgc ggcatcgatc
      601 cgtcagcgtt acgcgtcggc ctgccggtga cggtggcgtt cgatcgggtg aaagacgatc
      661 tgacactgcc ggtgttcgag gcgggatagg aatttacctc gaagcgttcc gcgtgccctc
      721 gacgacgacc cttcgagcgg ccaccgcgcg tccggcggcg ttgtcagggc cgaattccgc
      781 ggcgcgaacc ggcagttcgg ccggtccgaa cgcattctcg tgacgggcga tggtgatccg
      841 gcatccgggc cgggcgtcgc tgatcgccag gtccatgccg tgcagccgcg ccaccgcggc
      901 gaccagggcc agacccaatc cgcttcccgg cgtgttgcgg ctggattcgg cgcgatagaa
      961 ccggcggagg acacaggcgg cttcgctggc ggggatgccg ggtccggtgt cggtcacctc
     1021 aaagccgatt gtgccggccc gagcgaaaca gccgacggtg acgtggccgc cgccaggggt
     1081 gaatttcagg gcgttgtcga caagattgcc tactgcctca aacaacaggc ttggatcgcc
     1141 gcgcatcatt accggggtcg cgtcgggggc gatttgaatg agccggacgc ctctcgcttc
     1201 cgcgaccggt tcatagaatt cgacggcatc ggcgacgacc tcggaaatat ccgcttcggt
     1261 gaagccggcg cgccgggcgc cgctttccac ttccgagatg cgcaggatgg cggcgaatgt
     1321 gttcaggacg tccttggttt cgatgatcgc ttcgtcgacc gccatcgcgt agtcctcgga
     1381 cgagatggct cggcggcgca tgcgctccat gccggcgagc aggcgtgtca ggggtgtgcg
     1441 caagtcgtgc gcgatgttgt cgcagacccc cttgacctcc tgcatcaggc gctcgatttc
     1501 gcccagcatg ccgttgatga cgatggccag ccggtcgagg tcgtcggttt gcccgtgcgt
     1561 cggcagccgt tccgacaggt cgccgttgac gatgcgctgg atggattggg tgacgccgtc
     1621 gatgcggcgg acggcgccgg cgccgatgaa cgccgcgccg gccaggccga tcagcgtggt
     1681 tatgacggca acccagatga acgcgttgat cagcaccgcg gcgaaggcgt gcagcgcgtc
     1741 gatgtccagg gcgaccagaa ggtagtcccc cgatggcctg cggtggacca cggcgcggaa
     1801 gctcaccggc cggccgtcct gcttaaacct gaaatcgaac ggggcgtcct gtggcatggc
     1861 ggccaacgcc gcggctgtca gcgtcaacgg ggttccggcc aggcgcatgc ccacggggtc
     1921 gaacagcgtc agaggacgct ccagcgtcgg atcggcgacg acgtgggcgg tcaatcgttg
     1981 cagcaggtcg ctgcgatcga tcgggtggaa gatcgtttgc tcatgcgcca gccaggcgtc
     2041 gatgcggccg atgatgtagt ggtttgtctg ccaatacaga aaaccgaaca ggacagacga
     2101 cgcgacaccg aacaggatga gaaaacgcag tgcgagccga aagctcgatg tccggggaag
     2161 gtcaaccagc cgcatggagc atgtagcctg caccgcgtac ggtgcggatc atcggttcgg
     2221 tgctctcgga gtcgagcttg cggcgcagtt tgctgatgtg catgtcgatc aggttggtcg
     2281 gctcgacggt gcggtagttc cacacctcct cgaacagcat ggttcgtgtg acgacctggt
     2341 cggcgtgccg catcaggaat tcgagcaggc gaaactc
//
LOCUS       DATAVD010000321         1753 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_216071, whole genome shotgun sequence.
ACCESSION   DATAVD010000321 DATAVD010000000
VERSION     DATAVD010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1753
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216071"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..603)
                     /locus_tag="VHX39_05885"
     CDS             complement(<1..603)
                     /locus_tag="VHX39_05885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX3990684.1"
                     /translation="MTSPNFAGLGLPDSLLHALTAHKFTTPTPIQVDAIPPLLKGRDL
                     LGIAQTGSGKTFAFSLPILTHLMAEPRRPAPFQTRALILAPTRELALQIDEAIRSVTA
                     GARIRTVVIIGGASRFRQCEAMRRGAEIVIGTPGRVRDLMNTRELSIATAERFVLDEA
                     DRMLDLGFIKDIRHIVSALPTRRQSALFSATMPAEIAQLAA"
     gene            complement(899..>1753)
                     /locus_tag="VHX39_05890"
     CDS             complement(899..>1753)
                     /locus_tag="VHX39_05890"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3990685.1"
                     /translation="GVNLIDTAAVYGTEPVVGRALAGVARDSVVVCTKASKPINDPAF
                     TVAQIVESLDGSLSRLGMDYVDVFQLHAVPPAAYHYVRNEIVPALLREKEKGKFRFLG
                     ITETSPNDHEQQMMQQAAADTPWDTAMFAFNLMAQVARENVFPLTLKNRVGTLMMFAV
                     RSIFARPDQLAATVKDLAAKGLVPADLAASDEPLGFLVHPDGASSVTDAAYRYVRHEP
                     GVDVVLFGTGSPEHLKANVASILKPPLPEADRAKLQTLFSHLRGVGLELPPFARERRA
                     AAAKGGGG"
BASE COUNT          340 a          553 c          548 g          312 t
ORIGIN      
        1 ggcggccagt tgggcgatct cggccggcat ggtcgcagag aacaaggctg actgccggcg
       61 cgtgggcagc gcgctgacga tgtgccggat gtccttgata aagcccagat cgagcatgcg
      121 gtcggcttcg tcgaggacga agcgttcggc ggtggcaatc gacaattccc gcgtattcat
      181 caggtcgcgg acccggccgg gcgtgccgat gacgatttcg gcgccgcgcc gcatggcctc
      241 gcattggcgg aaccggctgg cgccgccgat gatcacgacg gtgcggatac gggcgccagc
      301 ggtgactgag cgaatggcct catcgatctg cagggcaagt tctcgggtgg gtgccaggat
      361 cagcgcacgg gtctggaacg gcgccggacg ccgaggttcg gccatcagat gggtcaggat
      421 cggcagggaa aaggcgaagg tcttgccgct gccggtttgc gcaatgccca gaaggtcgcg
      481 gcccttgagc agcggcggga tggcatcgac ctggattggg gtgggggtgg tgaatttgtg
      541 cgccgtcagc gcatgcaaca ggctatcggg caggccgagg cccgcgaagt tcggacttgt
      601 cacgagggat gaatgctcca gcaccagcca tgccggtgcc tgttgtccat gtcccagcgc
      661 gatccaatgg ggacggacgg tcggtggatg agaaattcct ggaagacgtc cgggccggag
      721 tttgggccca gggcgtcaat cacgcgatcc tggaatgacg agcgctatat cgtggtgcgg
      781 cgcggaagat gcaagcgaat tcgggccggt gtgggcggag tcatggaagt gtcgcgacga
      841 aacaccataa aacgagtccg catttgatat cgacacgcag atacgcgagc agcagcggtt
      901 aacccccacc gcccttcgcc gctgctgccc tccgctcccg cgcaaacggc ggcaactcca
      961 acccaacccc gcgcaagtga ctgaacagcg tttgcagttt cgcccgatcc gcctctggca
     1021 acggcggctt cagaatggat gcaacgttgg ccttcaaatg ctcgggcgat cctgtgccaa
     1081 acagcaccac atcgacgccc ggctcgtgtc tcacataccg atacgccgcg tcggtcaccg
     1141 aacttgcccc gtccggatgc accagaaatc ccaacggctc atcgcttgcc gccaggtcag
     1201 ccggcaccag tcccttggcc gcaaggtcct tcaccgtcgc cgccagttgg tcgggacgtg
     1261 caaagatgct gcgcactgcg aacatcatca acgttcccac cctgttcttc agtgttaacg
     1321 gaaatacgtt ctcccgtgcc acctgggcca tcagattgaa tgcgaacatc gcagtgtccc
     1381 acggcgtgtc tgccgccgcc tgctgcatca tctgctgttc gtgatcgttc ggcgacgtct
     1441 cggtgatgcc gaggaaacga aattttccct tctccttctc ccgtaacaaa gcaggaacga
     1501 tctcgttgcg cacataatga tacgccgcgg gcggcaccgc atgcagctgg aacacgtcga
     1561 cgtaatccat gccaagccgc gacaacgatc catccagact ctcgacgatc tgcgccaccg
     1621 tgaacgccgg atcgttgatc ggcttcgagg ccttggtgca caccacgaca ctgtcgcgag
     1681 ccacgccggc caatgcccgc ccgaccaccg gctcggtgcc ataaaccgcc gccgtatcga
     1741 tcaggttgac ccc
//
LOCUS       DATAVD010000322         2431 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2263282, whole genome shotgun sequence.
ACCESSION   DATAVD010000322 DATAVD010000000
VERSION     DATAVD010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2431
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2263282"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..488)
                     /locus_tag="VHX39_05895"
     CDS             complement(<1..488)
                     /locus_tag="VHX39_05895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990686.1"
                     /translation="MAKLVAGFGSSHSPMLACQVEDWLDHAFLNRDRARQFVDFDGNP
                     CRYDDLLERAPEDAAARIDSAVLRQRHANMSAAIARLKDDVAAAKLDALIIIGDDQEE
                     MFDHSNMPAIGVYYGKTITNAQATPATAPLDRARMRIQEPDGNVDYPCHVPLAHHLIA
                     SL"
     gene            complement(547..1164)
                     /locus_tag="VHX39_05900"
     CDS             complement(547..1164)
                     /locus_tag="VHX39_05900"
                     /inference="COORDINATES: protein motif:HMM:NF019590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HEX3990687.1"
                     /translation="MIIEMRTYTLRPGSIAEAEKRFGEALPARQKHSRLAAFWHSEVG
                     PLNQIIHVWGYDSFEHRAAVRAAASKEAGWPPNIREFVQTQHSEVFLPAPFSPPLEPK
                     QVGPIFEIRQYTLAAGAIPGMIDRWAEKIEGRQKFSPLVGAWYTEFGALNKWCHIWAY
                     KDANQRFEVRDKARAAGAWPPGSPPGTVVSQVNAIVMPSAFSPIR"
     gene            complement(1255..>2431)
                     /locus_tag="VHX39_05905"
     CDS             complement(1255..>2431)
                     /locus_tag="VHX39_05905"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3990688.1"
                     /translation="QVVGDSSRLRQILVNLINNATRFTNVGGITVGVRMIATDRQTLT
                     LDIAVTDTGIGIDADQQQELFSAFTQVDGSISRRVGGTGLGLAICRHLVTLMGGTIGV
                     DSTQGQGSTFRFDIRLRRVPAEQLAPPSEQPAAKPAQHLKVLLAEDNPTNRHVASRML
                     TRMGHTVDAVEDGAQAISAAATGDYDVILMDVMMPEVDGLAATRAIRAGEAPRSNTMI
                     IGLTANALPADRDACFAAGMNDFVTKPVTLERMRAALEQAAVADPVGPVIVSGAVTLD
                     AAFLNRLGQEISPDGVTEMIHIFLEDAPARMAAIRRGMANGAIQTVRREAHALAGAAS
                     NVGLSRLAEASGALQNAVERSAVDDVMIEAVAAALRDSLPLAAAWAEAHEGMATTSA"
BASE COUNT          419 a          778 c          775 g          459 t
ORIGIN      
        1 tgcagggacg cgataagatg gtgcgccagc ggaacgtgac agggataatc gacattgcca
       61 tcgggttcct gaatgcgcat ccgcgcccgg tccaacggcg ccgtggcggg cgttgcctga
      121 gcgttggtga tggtcttgcc gtaatacaca ccgatcgccg gcatgttact gtggtcgaac
      181 atttcctcct gatcgtcgcc gatgatgatc agggcatcga gcttcgcagc agccacgtcg
      241 tccttgagcc gggcgattgc tgccgacatg ttggcgtggc gttgccgcag cacagcggag
      301 tcgatgcgcg cggcggcgtc ttccggcgca cgttccagca aatcgtcata tcggcaggga
      361 ttgccgtcga agtcgacgaa ctggcgggcg cgatcgcggt tgaggaacgc atggtccagc
      421 cagtcctcga cctgacacgc caacatcgga ctatgggaag atccaaatcc tgccaccaac
      481 tttgccatga gccctctccg tcaggcgatg ggccgcacca gcgccggtgc ggcccgaatt
      541 tgcagttcag cgaattggcg agaatgccga cggcatcacg atggcgttga cctgactcac
      601 caccgtgccg ggcgggctgc cgggcggcca cgcaccggcg gcgcgggctt tgtcgcgcac
      661 ctcgaagcgc tgattggcat ccttgtaagc ccagatgtga caccatttgt tcaaggcgcc
      721 aaactcggtg taccacgcgc ccaccagggg cgagaacttc tgccggcctt cgattttctc
      781 cgcccaacga tcgatcatgc cggggatagc gccggccgcc agggtgtact gacggatctc
      841 gaagatcggc ccgacctgct tcggctccag cggcggggag aacggcgccg gcaggaacac
      901 ttcgctgtgc tgcgtctgga cgaattcccg gatgttcggc ggccagccgg cttccttcga
      961 cgcagccgcg cgcaccgcgg cgcggtgctc gaaactgtca tagccccaga catggatgat
     1021 ttggttcagc gggccaactt cggagtgcca gaaggccgcg agcctggagt gtttttgccg
     1081 cgccggcagt gcctcgccga accgcttctc ggcttcggcg atcgagcctg gccgcaatgt
     1141 gtaagtacgc atttcgatga tcatggggcg ccctcctgtt accttgcgcg gcaacagtag
     1201 aacatttttg gccccggtga aaaccgggtg ctcctggtcg cccgggcagc gcgtttatgc
     1261 gctggttgtt gccatccctt cgtgggcttc agcccaggcg gcggcaagcg gcaggctgtc
     1321 gcgcaacgcg gcagcaacgg cctcgatcat gacgtcgtcc acggcagatc gttcgacggc
     1381 attttgcagc gctccggatg cctcggccag ccgcgacagc ccgacgttac tggcagcgcc
     1441 tgccagtgcg tgggcttcgc gccgcacagt ctgaatggcg ccattcgcca tgccgcgccg
     1501 gatcgccgcc atccgggcgg gtgcatcctc cagaaagatg tggatcattt cggtgacacc
     1561 gtccgggctg atctcctgac cgagccggtt cagaaatgcc gcatccaacg ttacggcacc
     1621 ggacacaatc accgggccga ccgggtcagc aacagcggct tgctccaacg cggcgcgcat
     1681 tcgctccagt gtaaccggct tggtaacgaa atcgttcatg ccggccgcga aacaggcgtc
     1741 ccggtctgcc ggcagagcat tggcggtcag gccgatgatc atggtgttgc tgcgaggcgc
     1801 ctccccggcc cggatcgccc gggtcgcggc cagtccgtcc acctcgggca tcatcacgtc
     1861 catcaggatg acgtcgtagt cgcctgtcgc ggccgcgctg attgcctgag cgccgtcttc
     1921 cactgcatcg accgtatggc ccattcgggt cagcatgcgg gaggcgacgt gacggttggt
     1981 cgggttgtcc tcggccagca agactttcag gtgctgcgcc ggtttggcag ccggttgctc
     2041 cgacggaggc gccaattgct ccgccgggac gcggcgcagg cggatgtcga agcggaacgt
     2101 actgccctgg ccctgtgtgc tgtcgacgcc aatcgtgccg cccatcaagg tgacaagatg
     2161 tcggcagatg gccagcccga ggccggtgcc cccgacccgc cgggaaatcg aaccatcgac
     2221 ctgggtgaac gctgaaaaca gctcctgttg ctgatccgca tcgattccaa taccggtgtc
     2281 ggtgactgcg atgtccaggg tgagcgtttg ccggtccgtc gcgatcattc ggacaccgac
     2341 cgtgatgcca cccacgttcg tgaacctggt cgcattgttg atcaaattca ccagtatctg
     2401 gcgcaatcgt gatgaatcgc caacaacctg g
//
LOCUS       DATAVD010000323         5407 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_588156, whole genome shotgun sequence.
ACCESSION   DATAVD010000323 DATAVD010000000
VERSION     DATAVD010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5407
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_588156"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            66..632
                     /locus_tag="VHX39_05910"
     CDS             66..632
                     /locus_tag="VHX39_05910"
                     /inference="COORDINATES: protein motif:HMM:NF012344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990689.1"
                     /translation="MSDGALPDQDENGGERLEHRWAVVATCIIVLLTGMAVFAGVHEA
                     SLPQSRVETVDPRTLHLGGEFIESNLGSALQPDGSVVVRAIGQQYSFTPQCIVVPADT
                     PITFRVTSSDVIHGFLITGTSINLMLVPGFISSIPARFSTPGERHMPCHEFCGFGHEG
                     MWGRVKVIDRAEFLRMAADTRRLSCVAQ"
     gene            622..2244
                     /locus_tag="VHX39_05915"
     CDS             622..2244
                     /locus_tag="VHX39_05915"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="b(o/a)3-type cytochrome-c oxidase subunit 1"
                     /protein_id="HEX3990690.1"
                     /translation="MPSRRMILAHFWLAFGSFGAALLLGEWQMFVRSPLHAWIGDPEL
                     YYRSVTAHGTTMAYVFPTLVAMGFGYFVTEASLHRPLVGLRWAWTGLALVAIGTVMAV
                     VPVALGRASVLYTFYPPMIGNAFYYIGVVVVVVGSWIWVALMSVNLYIWKRDNPGAPV
                     PFAMFASVAGSYLWGWTAVGAALELIFQIIPGAIGLTDTIDAGLARVFFSWTLHAIVY
                     FWLMPAYIAYYTIVPRAIGGRLFSDQMGRISFILFLVVAMPIGVHHLFEDPEVGSGFK
                     FLHSVYTGLVTIPTLLTVFTICASVEIAARRRGGSGALGWLTKLPWRNPVMLGVALSF
                     IMLGFGGAGGIINMSYQLNSTIHNTQWVTGHFHLIVAGAIVIMYFVIAYDTWPHLTGR
                     AMDSLGLMRTQLWLWFIGMIVLTFPWHYVGILGMPRRMAFYDYTDPVIAEQAASVVMS
                     VIGGAILVLSGALFLLVLIHGQFAAREEPGIYRFSVALHPPRRLPAALNGFGLWLSLM
                     IGLTLVNYGFPIAHLLATPGTDVPIIRVGGAR"
     gene            2241..3023
                     /locus_tag="VHX39_05920"
     CDS             2241..3023
                     /locus_tag="VHX39_05920"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX3990691.1"
                     /translation="MNWNWLRDRWVVTSVGATAGIAVVAIVLGFAWLPYEQPGEQFRG
                     VWDAICSAAGLLRPVSGSQPIVQASYPTSQVELFPGMLGNASAESIGRGATLALRCTM
                     CHGARGMSQANAPNLAGQYAGAIYKELADFKSGARGSAIMQPLVADLSDQDMRELAAY
                     YAYLPRVHDALAVDGGTPRIVADGAPMRNIAPCGACHGEPGSKAGAPWLKGQPVAYLQ
                     AQLDAFANGTRRNDIDQQMRNVVRGMTPAEIAAASRYYAGGP"
     gene            3395..3979
                     /locus_tag="VHX39_05925"
     CDS             3395..3979
                     /locus_tag="VHX39_05925"
                     /inference="COORDINATES: protein motif:HMM:NF013979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvoyl-dependent arginine decarboxylase"
                     /protein_id="HEX3990692.1"
                     /translation="MAALRPDEETKMFPTRTRMFLTKGVGVHRHALTAFEFALRDADI
                     EQQNLVYVSSILPPRCEVIAREAGVELLRPGDITFCVLARSETNEFGRHIYASLGLAR
                     SSEPGMYGYISEDHGFGMTEAASGEQAEDLAATMLASTLGLDFDPDAAWNERKQIYEH
                     GSVTINSTSITATAICGPDNRWTCAIAAAVFLFV"
     gene            complement(3994..4800)
                     /locus_tag="VHX39_05930"
     CDS             complement(3994..4800)
                     /locus_tag="VHX39_05930"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEX3990693.1"
                     /translation="MLRTIATTLCKNRSRVVLVLLQFVCIFGIDAMAARARNDQTAAA
                     TSLTQPVSTSAPKAPAQTEMPPLSSPPMLSPEAERVGQIALQNGDQQFLMVDKARGEI
                     ILFESGKPIFSGPALTGAGLGDRVPPVVLTFSGLHPLTLEQKVTPSGRFTVTTELDPD
                     YGRVWNLNEIHGKDWDFAIHQVFLGIASEHRDARFHSANAADRHITWGCINVEHSTIQ
                     TLWQHLLHKDKIPLYILPNDERLVPALFPLKHPSSVTKSVTAAEVNDHTH"
     gene            5186..>5407
                     /locus_tag="VHX39_05935"
     CDS             5186..>5407
                     /locus_tag="VHX39_05935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990694.1"
                     /translation="MAEILALGISHYPPLTGQDDRMAGILKRMLRNPKLPESLRTPEG
                     WPAAMRAEWGNDEGTTSAAKHRAALVGWME"
BASE COUNT          942 a         1582 c         1708 g         1175 t
ORIGIN      
        1 ttcgttgtcg tggcggtctg gttcgccttt tacctgctgg tattcgtgcc gcgcgcgggt
       61 gccccgtgag cgacggcgcg cttccggacc aggacgagaa cggcggcgag cgcctggaac
      121 atcggtgggc tgtcgtcgcc acctgcatca tcgttttgct gaccgggatg gcggtgttcg
      181 ccggggtgca cgaggcctcg ctgccgcaaa gccgcgtcga gaccgttgat ccgcgcacgc
      241 tgcatctcgg cggcgagttc atcgagagca acctcggcag tgccctgcaa cctgacggtt
      301 cggtggtggt gcgcgcgatc ggccagcaat actcgttcac gccgcaatgc atcgtggtgc
      361 cggcggacac gccgatcacg ttccgcgtca ccagttcgga tgtgatccat gggttcctga
      421 tcaccgggac cagcatcaat ctcatgctgg tgccaggctt catttccagc attccggcgc
      481 gcttctccac tccgggcgaa cggcacatgc catgtcacga gttttgcggc tttggccatg
      541 aaggcatgtg gggccgggtc aaagtcatcg acagggctga gtttctccga atggctgcgg
      601 acaccaggag gttgagctgt gttgcccagt agacggatga ttttggcgca cttttggttg
      661 gcgttcggaa gttttggcgc ggcgttgctt ctgggcgaat ggcagatgtt cgtgcgcagc
      721 ccgctgcatg cctggatcgg cgatcccgaa ctgtattacc gctcggtcac cgcgcacggc
      781 accacgatgg cctacgtgtt tccaacactc gtcgcgatgg ggttcggtta tttcgttacc
      841 gaggcgtcat tgcaccgccc gctggttggc ctgcggtggg cgtggaccgg cctcgctttg
      901 gtcgccatcg ggacggtcat ggccgtggtc cccgtcgcgt tggggcgagc ctcggtgctc
      961 tatactttct acccgccgat gatcggcaat gcattctatt acatcggggt tgtcgtcgtc
     1021 gttgttggct cctggatctg ggtcgcgctg atgtcggtca atctgtacat ctggaagcgg
     1081 gacaaccccg gagcgccggt gccatttgcg atgttcgcgt cggtggcagg atcctacctt
     1141 tggggctgga cggcggttgg tgccgctctc gaactgattt ttcagatcat tcccggtgcg
     1201 atcggcctga ccgatacgat cgacgcgggt ctcgcgcggg tgttcttctc ctggaccttg
     1261 cacgcaattg tctatttctg gttgatgccg gcttatatcg cttattatac gatcgttccg
     1321 cgcgcgatcg ggggtcgatt gttcagcgac cagatgggca ggatctcgtt catcctgttc
     1381 cttgtcgttg ccatgccgat cggtgtgcac cacttgttcg aagaccctga ggtcggctcc
     1441 gggttcaagt ttctgcactc ggtttacacc ggcctggtga ccataccgac cctgctgacc
     1501 gtgttcacca tttgtgcatc ggtcgaaatc gcggcacgcc ggcgcggcgg cagcggggcc
     1561 ctgggatggc tgacgaaatt gccatggcgc aaccctgtca tgctcggcgt cgcgctttcc
     1621 ttcatcatgc tgggctttgg cggcgccggc ggcattatca acatgagcta tcagctcaac
     1681 agcacaatcc ataacacgca gtgggtcacc gggcacttcc atctgatcgt cgccggcgcg
     1741 atcgtcatca tgtatttcgt cattgcctac gacacgtggc cgcatttgac gggtcgcgca
     1801 atggacagtc tcggtctgat gcggacccag ctttggctgt ggttcatcgg gatgatcgtg
     1861 ctgacgttcc cgtggcatta cgtcggcatc ctcggcatgc cacggcgcat ggcgttctac
     1921 gactacaccg atccggttat cgccgagcag gcggcatcgg tcgtgatgtc ggtgatcggc
     1981 ggcgccattt tggtgttatc cggggcgctg ttcctgctgg tgctgataca cggccagttt
     2041 gccgcgcgcg aggagccggg catctaccgc ttcagcgtcg ccctgcatcc cccgcgcagg
     2101 cttcccgccg cgctgaatgg gttcggtctg tggctcagtc tgatgatcgg cctgaccctt
     2161 gttaattacg gctttccgat tgcccatctg ctcgcgacac caggcaccga cgtgccaatc
     2221 atacgcgttg gaggcgcacg gtgaactgga actggctgcg cgatcgttgg gtcgtgacca
     2281 gcgtcggggc aactgccggt atcgcggtcg tcgccatcgt tctgggtttc gcgtggctgc
     2341 cgtacgaaca acccggcgag cagtttcgtg gcgtttggga tgcgatatgc tcggcggctg
     2401 gcctgctgcg gccggtttca ggcagtcaac ccatcgtgca ggccagctat ccgacctcac
     2461 aggttgaact cttcccgggc atgctgggta acgccagcgc ggagtcaatc ggtcgtggcg
     2521 cgacactggc cttgcgttgc acgatgtgcc acggcgcgcg cggcatgagc caggcgaatg
     2581 cgcctaacct tgccggtcag tatgcaggtg cgatctacaa agaactggcg gatttcaaga
     2641 gcggcgcgcg tggcagcgcg atcatgcagc ctctcgtggc cgacctgagc gatcaggata
     2701 tgcgtgagct tgccgcttac tatgcctatt tgccccgggt ccacgatgcg cttgcggtgg
     2761 atggcgggac gccacggatc gtcgcggacg gtgcgccgat gcgcaacatc gcaccatgcg
     2821 gcgcgtgcca tggcgaaccg ggtagtaaag ccggtgcccc atggcttaag ggccagccgg
     2881 tcgcatacct gcaggcgcag ctcgatgcct tcgccaacgg aacgaggcga aacgatatcg
     2941 atcagcagat gcgcaacgtc gtacgcggga tgaccccggc tgagatcgct gccgccagcc
     3001 gctattacgc cggcggccca tagcggtttt tgcccgcgca gagtcgcagg cagcaatagc
     3061 ccgctgatcg gaattcaggc gtggaaatcg accgtgccgt tgcgcgggct aatcgacgtc
     3121 cccgaagcga ctgacgaatc cgttgacctg gacgtgggtt ggacccgcgc actgtggatg
     3181 tcggatggga atggagccgg gaggcggggg tgatagatcc cctgcggcgc gctattcatc
     3241 acctgaagcg tgagcgaact gatggaaatg accatgggat ggtttccgtg acaagcgcgg
     3301 aattcttcca cgtggcatgc ggcgaatcgt acagcagctt cgatgtcata aaactccaat
     3361 ggttgcattg gcgttgcagg agtacggtaa gccgatggcc gccctccggc ccgacgagga
     3421 gaccaagatg ttccccacgc ggacccgcat gttcctgacc aaaggcgtcg gtgtccatcg
     3481 tcacgccctc acggcgtttg agttcgcctt gcgcgacgcc gacatcgaac agcaaaacct
     3541 ggtttacgtg tcgtccattc tgccgccgcg ctgcgaagtg atcgcccgcg aagccggcgt
     3601 tgaattgctc cggcccggcg atatcacgtt ctgcgtcctg gcgcgctcgg aaaccaacga
     3661 gttcggccgc catatttatg ccagcctcgg tttggcccga tcctcggagc cgggtatgta
     3721 cggctatatc tcggaagatc atggctttgg catgactgaa gcggccagtg gcgagcaggc
     3781 cgaagacctg gctgcgacca tgttggcttc caccctcggt ctggatttcg atcccgacgc
     3841 ggcgtggaac gagcgcaagc agatctacga acacggcagc gtgaccatca acagtacatc
     3901 gatcaccgcg acggcgatat gcggccccga caatcgctgg acctgcgcga tcgctgcagc
     3961 ggtgtttttg ttcgtttagt gcaaccgaag atctcagtgc gtgtggtcgt ttacctcggc
     4021 tgcggtaaca gatttagtga cagaagacgg gtgcttcagt ggaaataatg cgggaaccag
     4081 tctttcgtcg ttcgggagaa tatacagcgg tatcttatcc ttatgtaaca ggtgctgcca
     4141 aagcgtctga attgtgctgt gctctacgtt aatgcaaccc caggtgatgt gacggtcggc
     4201 agcgtttgcc gaatggaacc ttgcgtcgcg atgctcggac gcgatgccca gaaacacctg
     4261 gtggattgcg aaatcccagt ccttaccgtg aatttcgttg aggttccaaa ctcttccgta
     4321 gtcgggatcg agttccgtgg taacggtaaa tcgtccagaa ggcgtcactt tctgctcgag
     4381 agtcagcgga tggaggccag aaaaagtcaa gactaccggc ggaacacgat cgcccaagcc
     4441 ggcgcctgtg agtgcgggtc cgctgaatat cggcttcccg ctctcgaaca atatgatttc
     4501 accccgggct ttatcgacca tcaggaattg ttgatcacca ttttgcaagg cgatctggcc
     4561 gacccgctct gcctcgggcg acagcattgg cggggaggag aggggcggca tttcggtttg
     4621 cgccggagct ttgggtgcgc tggtggacac tggttgcgtc agcgacgttg ctgcggccgt
     4681 ttggtcattt cgggcccgcg cggccattgc atcaataccg aaaatgcaga cgaattgtaa
     4741 tagtaccagc acgactcgcg aacggttttt gcacagcgtc gttgcaatcg tccgaagcat
     4801 ccgattgttt ctgccggact cgcactgcaa tctcactggt ggtttccccg ccaactttgc
     4861 cagtcataaa taataccctg caattccggg cctgccaaga atttggaatc gccggcgaat
     4921 tgcaacccgg acgcggcagc ttcttccgtg cgaccgcgtc cttgggccag tttgagatgg
     4981 ccattgggat cggtcgttgc gccgccgcca gtgggggacc ggctaatgga gggtgcccag
     5041 gagcggacga gctctcgatc cgggccaccg ccctgcctgg tttctcgctg ggcgaaatcg
     5101 ctgtatgatg ccaaaacgtt gcgcgatcac gatcgcggca ggctggcgtc gccgaaggtt
     5161 accgaagcac atccaggagg gaaccatggc cgagattctg gcacttggaa tatcgcatta
     5221 cccaccgctg accgggcagg acgaccgcat ggccggtatc ctgaagcgca tgctgcgcaa
     5281 cccgaagctg cccgaaagcc tgcgcacgcc ggagggctgg ccggctgcca tgcgtgccga
     5341 gtggggcaat gacgaaggca ccacctcggc ggcaaagcac cgggccgcgc tggttgggtg
     5401 gatggaa
//
LOCUS       DATAVD010000324        10504 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_31430, whole genome shotgun sequence.
ACCESSION   DATAVD010000324 DATAVD010000000
VERSION     DATAVD010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10504
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31430"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(109..1350)
                     /locus_tag="VHX39_05940"
     CDS             complement(109..1350)
                     /locus_tag="VHX39_05940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014189011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX3990695.1"
                     /translation="MRNRVALLIAGLLSLGAAARALAAADRQDTASIERGRYLTILGD
                     CGACHNEPGNGTPFAGGRAIPTPFGQMLAPNITPDGETGIGDWSDDEFIDSLQKGTGR
                     HGEPLYPAMPYSYFTHITRDDAKAVRSYLATVSAVRHKVVANQLPFPFDVRLSMRAWD
                     RLFFRPGRFKPSPQKSAEWNRGAYLVEGLEHCGMCHTPKNVLGGDKDSERLQGYAVQG
                     WFAPNISDNGYDGLGGWTVDDIVQYLKTGHNRMAAASGPMAEEVENSGALTTDADLHA
                     IAVYLKDQPGGPAKPAPLAANDPAMRVGAVIYADECSACHTPNGSGVPGLFPTLPGAA
                     SVQSRQPDSLLHVVLAGARSASTTGAPTAPAMPPFGWLLNDHQIASVATYVRNAWGNA
                     GSTVTEAEVGKVRKKLAQTPQ"
     gene            complement(1343..3121)
                     /locus_tag="VHX39_05945"
     CDS             complement(1343..3121)
                     /locus_tag="VHX39_05945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014189012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX3990696.1"
                     /translation="MARKLPAKDVVIIGLGWTGSILAHELTEEGLDVVAIERGPWRDT
                     ASDFPPAYAPDELRYRTRHELFLRTKQATLTFRNHRQQAALPVRSWGAFMLGNGAGGA
                     GVHWNAETWRFLPSDFVVKSHLTQRYGSSFLPEGMTIQDWGITYDDLEPYYDKFEYLC
                     GTSGTAGNLKGQIQPGGNPFEGPRSRPYPTPAQPQPFSHTLFAETAKRMGYKPFPQPS
                     GNLSVAYTNPLGVQMGPCTYCGFCEWFGCGNYSKASPQTTILPALLRKPNFQARSLCE
                     VKQINLDRSRKRATGVTYVDTSGEEWEQPADLVILCAFQLFNVQLLLLSGIGTPYDPA
                     TGQGQIGRNFTHQVISNAVGFFDNKKFNFNPFIASGAIGMCIDEFNGDNFDHGPLGFV
                     GGGYMGQMQTNGRPIEKTPVPPGTPGWGAEWKKAVKDNYLSTVYTGTAVHASSYSYKA
                     NYLDLDPTYKDRFGRPLVRMTMNWYDNEVKMSNWLTDRYAEIIRKMGAKQVFAYPRTA
                     PYDITKYQTSHLCGGAVMGDNPGNSALNQYLQSWDVPNLFVQGATAFPQNAGYNPTNT
                     VGALAFRSVEAIRNQYLKNPGPLIHA"
     gene            complement(3124..3849)
                     /locus_tag="VHX39_05950"
     CDS             complement(3124..3849)
                     /locus_tag="VHX39_05950"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HEX3990697.1"
                     /translation="MPDQKRRNLLALTAAVVVAAPAARAALIRNGLPWVPSAADPPSQ
                     AGAGGWQYFTPEEADAMEAIVDRLIPPDPETPGGKDCGCAVFIDRQLAGPYGRADSSY
                     MMGPFHEGTKEQGEQSPQTPAERYRAGLAALDRYCKEQFGGARFAQLADDKKDSLLKG
                     LETGSVTLPGADSKVFFRHALIDTQQGFFADPVYGGNRDMASWKMIGFPGARYDYRDW
                     VHRHNERFPLPPISIREHPNWKG"
     gene            complement(3967..5364)
                     /locus_tag="VHX39_05955"
     CDS             complement(3967..5364)
                     /locus_tag="VHX39_05955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016738213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045735 - nutrient reservoir activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3990698.1"
                     /translation="MEPPRRPVAQTCLPEKYTDRRFERSRFDAGSAHAKQKGTPMIVS
                     RRNILSATAAGGVMTTTLAQAARFGNPDSPAQGSDAAKGNPASITDPGPRNPTLGSQF
                     PNSEAPPSTDHGSLPNFWFPFEQANKRIQDGGWTREVTERELPIAKTLAGVDMRLTAG
                     GIRELHWHKPAEWAIVLYGNARITGFDQAGRSFVDDVSAGDLWNFPSGIPHSIQGLEP
                     DGTEFLLVFDDGAFSEYSTFLPTQWMAHTPPEVLAKNFGIPAVAFSKIPLHELYIFQS
                     IVPGPLAADQQAAKGPQGSTPETFSYRLMKQKPNFSSPAGEVRIVDKSNFPIASTIAA
                     AHVIVRPGAMREMHWHPNADEWQYYIAGDGRMGVFAAGENINTKDFHAGDVGYVPRSM
                     GHYIENTGSTDLVFLEIFRSPYYSSISFSQWLSHLPPALVQAHFNLSTETLNALSKTE
                     QTVIAGKPLANGKTG"
     gene            5724..6851
                     /locus_tag="VHX39_05960"
     CDS             5724..6851
                     /locus_tag="VHX39_05960"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03557 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEX3990699.1"
                     /translation="MKVAAAMAGSAPLGLSAAQAAPTKVQPVPQVEGKSNAGAAIGKG
                     LIGYMLAHEQFTVPELVSIGSQAAHGGFHLLATSDHFQPWQANEGHSGEAWVTMGALT
                     THVHQAWMGTTVTCPILRYSPAVVAEAFASLSHLAPGRIFLGVGSGEALNEEAATGAW
                     PKWRGRWDRLIEAIDIIRALWSGETVSHKGKYYNVDAKLYDPPARPIPLLTAANGRKS
                     MRLAGQYGDGLVTDPLTWKQHKAEWQDATYAAGKNPDDMPVLVEQYVVVGGDTEARKA
                     AELWRFGPQAFKSLYNVRDPAEIQRRAVAGTPLDQVMKGWPVSTDPAPHIQKIHELQE
                     SGVSIVNIHAGQSDQRRVVEFYATRVLPHVRQPSPPRQSAI"
     gene            complement(6883..7617)
                     /locus_tag="VHX39_05965"
     CDS             complement(6883..7617)
                     /locus_tag="VHX39_05965"
                     /inference="COORDINATES: protein motif:HMM:NF013252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990700.1"
                     /translation="MRLHPAASRIRRLSAKTPARLIVFDVLAAPDGAVVMDRPFQHRR
                     RLLKAFMAEAAIPKRFVISAATPDLGAAQAWLRNAGRGPTDGVVAKELARPYASGKRV
                     MIKVKQLRMADCVVGGFRYKRASRKVGSLLLGLYDAQGKLDHVGFTATITDEERPNLT
                     RRLEALRKALGFTGKAPGGPSRWSTELSGEWEPMLPELVVELLFYHVTGDRLRHRTKL
                     TRWRPDKAPHQCIFKRIKAALAEVKP"
     gene            complement(7618..7908)
                     /locus_tag="VHX39_05970"
                     /pseudo
     CDS             complement(7618..7908)
                     /locus_tag="VHX39_05970"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            8040..8879
                     /locus_tag="VHX39_05975"
     CDS             8040..8879
                     /locus_tag="VHX39_05975"
                     /inference="COORDINATES: protein motif:HMM:NF033580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEX3990701.1"
                     /translation="MLFRLAVPWVKLERGDLRYGRQPFDTVDLQVGLAVAEKRHKFQK
                     IGGTRYGMALKELLAVGNPDDPHRVYFEGRLPLARLSGGVWSAHYDLQSVQPMVEGWH
                     LADDAGSAGRAGIGRSAEHRQHHLQGPSLRRRGKRGAQEQAIGRSRGGRTTKIHAVAN
                     ASGRLIAFDLTAGQMGDIRSAPGLIEKLPKAAQVLADTAYESDKFREFLIARGSTPVT
                     KPNPTRKKIPPFDAASYKGRNVIKRAFSHLKDWRRVATRYDKLARSFRATVTLALLFR
                     WWI"
     gene            complement(9071..>10504)
                     /locus_tag="VHX39_05980"
     CDS             complement(9071..>10504)
                     /locus_tag="VHX39_05980"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011930745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HEX3990702.1"
                     /translation="DLLLYWAQMISDPALAAHIGERFDHVLVDEYQDTNRLQSSILLA
                     LKPVGAGLTVVGDDAQSIYAFRAASVRNILDFPSQFSPPAAIVTLDRNYRSTQPILAA
                     ANGVIGLAAERFTKNLWTERQSSELPALVSVRDEADQARYVVERVLENREGGTELKQQ
                     AVLFRTSSHSGPTEIELTRRNIPFVKFGGLKFLDTAHAKDLLALLRFVENPRDRVAAF
                     RILQLLPGVGPTSAQRVLDAIASQVDPIEALSEIDPPPRAGEGWTDLVATLLQLRSGK
                     AGWPGDIGCARLWYTPHLERMHEEASGRHADLLQLEQIAAGYPSRARFLTDLTLDPPD
                     ATSDQAGVPLLDEDYLILSTIHSAKGQEWKSVFVLNVVDGCMPSDLGTGTTAEIEEER
                     RLLYVAMTRAKDTLHLITPHRFFTHGQPSMGDRHIYAARSRFIPVSLLTLLESVTWPI
                     LATEVARQAAVNQVRIDVAARMRSMWG"
BASE COUNT         1915 a         3224 c         3335 g         2030 t
ORIGIN      
        1 aatccgggtc tatgcccgcc accacccgat cctcattcca tactgctcga tgaggctttt
       61 ctgggcgccg cggtctttcg ccggtcccaa cagcataggc tgtggcgcct attgcggagt
      121 ctgcgccagt ttcttccgaa ccttccccac ctcagcttca gtgacagtgg atccggcatt
      181 gccccaggcg ttgcggacat aggtggcaac ggacgcgatt tggtgatcgt tcaacaacca
      241 gccgaagggg ggcatcgcgg gtgctgtcgg tgcccccgtc gtgctggcgc tgcgggcgcc
      301 ggcgagaaca acgtgcagca gcgaatccgg ctgacgcgat tgcaccgagg cggcgccggg
      361 cagcgttggg aacaagcccg gcacaccgct accattaggg gtatggcagg cagagcattc
      421 gtcggcatag atgaccgccc ccacgcgcat ggcggggtca ttggccgcca gcggtgccgg
      481 tttcgccggc ccgccaggct ggtccttcaa gtagacggcg atggcgtgca agtcggcatc
      541 ggtggtcagg gcgccggagt tctcaacttc ctccgccatg ggaccggatg cggcggccat
      601 gcggttatga ccggtcttca ggtattgcac gatgtcatcc accgtccagc cgcccagccc
      661 gtcatagccg ttgtcgctga tattgggcgc gaaccacccc tgcacggcgt aaccttgcag
      721 ccgctcactg tccttgtcgc caccgagaac gttcttgggc gtgtgacaca tcccgcagtg
      781 ttccaacccc tcgaccaggt aggcgccgcg gttccattcg gcggattttt gcggcgacgg
      841 cttaaagcga ccgggacgga agaacagccg gtcccacgcg cgcatgctca ggcggacgtc
      901 gaacgggaac ggcaactggt ttgccaccac cttgtgcctg accgccgaca ccgttgccaa
      961 atacgaccgg accgccttcg catcatcccg agttatgtgc gtgaaatacg aatagggcat
     1021 cgccggatac agtggttcgc cgtggcggcc agtccctttc tgcagcgaat cgatgaactc
     1081 gtcgtcggac cagtcgccga tgccggtctc gccgtctggc gtgatgttcg gggccagcat
     1141 ttgtccgaac ggcgtcggga tcgctcgtcc gccggcgaac ggtgtgccgt tgcccggttc
     1201 gttgtggcag gcaccgcagt cgcccaggat cgtcagatag cgcccacgct cgatcgaggc
     1261 ggtatcctgg cggtccgccg ctgccaatgc gcgtgcagcg gcgccgagcg acagcagacc
     1321 cgcgatcagc agcgcgaccc ggttacgcat ggatcagcgg gcccggattt ttgaggtact
     1381 gattgcggat tgcctcgaca gaccgaaacg ccagcgcacc caccgtattg gtggggttgt
     1441 agccggcatt ctgcgggaac gcggtggcgc cctgcacgaa cagattgggc acgtcccagg
     1501 actgcaggta ctgattcagc gcgctgttgc ccggattgtc acccatgacg gcgccgccgc
     1561 acaaatgcga cgtctggtat ttcgtgatgt catagggggc tgtgcgcgga tacgcgaaga
     1621 cctgcttcgc ccccatcttc cggatgatct ccgcataccg gtcggttagc caattgctca
     1681 ttttgacttc gttatcgtac cagttcatcg tcatccgtac caacggccgg ccgaaccggt
     1741 ctttgtatgt cggatcgagg tcaagatagt tggctttgta actgtacgac gaagcgtgaa
     1801 ccgctgtccc ggtgtagacg gtgctcaggt aattatcctt caccgccttc ttccattccg
     1861 ccccccagcc gggtgtgccg ggcggaacag gggttttctc gatcggccgt ccgttggttt
     1921 gcatctgtcc catgtagccg ccgccaacga agcccagcgg cccatgatcg aaattgtcgc
     1981 cgttgaattc gtcgatgcac atgccgatcg caccggaggc gatgaacgga ttgaaattga
     2041 acttcttgtt atcgaagaat ccgacggcgt tggaaatcac ctggtgggtg aaattgcggc
     2101 cgatctggcc ttggccggtg gcgggatcgt atggcgtgcc gatgccggac agcagcagca
     2161 actggacatt gaacaactgg aaagcacaca ggatgaccag gtccgccggc tgttcccatt
     2221 cctcgccgga cgtatcgaca tacgtcacgc cggtggcacg cttgcggctc ctgtcgaggt
     2281 tgatctgttt cacctcacag agagaccgag cctggaagtt gggcttgcgt agcagggccg
     2341 gcaggatggt tgtctgcggg ctggccttcg aatagttgcc gcagccgaac cattcgcaga
     2401 acccgcaata cgtgcatggg cccatctgga cgcccagcgg attggtatac gcgacggaca
     2461 aattgccgga cggctgcggg aagggtttgt agcccatccg cttcgccgtc tcggcgaaca
     2521 gggtatggct gaacggctgc ggttgcgccg gcgtgggata ggggcgagac cgcggtccct
     2581 cgaacggatt gccgcccggc tggatctggc ccttcaggtt gccggcggtg cctgacgtgc
     2641 cgcacagata ctcgaacttg tcgtaatacg gctccaggtc gtcgtaggtg atgccccaat
     2701 cctggatcgt catgccctcc ggcaggaacg acgacccata gcgctgcgtc aaatgcgatt
     2761 taacaacgaa atccgacggc aggaagcgcc atgtctcggc gttccagtgt acgccggcgc
     2821 cccccgcgcc gttgcccagc atgaaagcac cccagctacg caccggcagc gccgcctgct
     2881 ggcgatggtt gcggaacgtt aacgtcgcct gcttcgtgcg taggaacagt tcgtgccggg
     2941 tacggtagcg cagttcgtcc ggcgcatagg ccggcgggaa atccgatgcg gtatcgcgcc
     3001 atggtccgcg ctcgatggcc acaacgtcca ggccttcctc ggtcagttcg tgcgccagga
     3061 tactaccggt ccaaccgagg ccgatgatga cgacgtcttt cgccggcagt ttgcgcgcca
     3121 tcgtcagcct ttccagttcg ggtgctcgcg gatgctgatc ggcggcagcg gaaatcgctc
     3181 attgtggcgg tgcacccagt cgcgatagtc gtagcgagcg cccgggaaac caatcatctt
     3241 ccacgacgcc atgtcgcgat tgccgccata gaccgggtcg gcaaagaatc cctgctgtgt
     3301 atcgatcagc gcatggcgga agaatacctt gctgtcagcg ccgggcagcg tcaccgaccc
     3361 cgtctccagg cctttgagca agctgtcttt cttgtcgtcc gcaagctggg cgaaccgagc
     3421 gcccccgaac tgctccttgc aataccgatc gagggccgcc aatccggcac gataccgttc
     3481 ggcgggggtt tgcggggatt gctcgccctg ctccttcgtc ccctcatgga agggccccat
     3541 catgtatgaa ctgtccgctc ggccgtacgg gccggccaac tggcgatcga tgaagacagc
     3601 gcagccgcag tccttgccgc cgggcgtttc cggatcaggc gggatcaacc gatcgacgat
     3661 ggcttccatc gcgtcggctt cttcgggggt gaaatactgc cagccccctg ccccggcctg
     3721 cgatggcgga tcggcggcgc ttgggaccca gggcaatccg ttcctgatta atgcggcccg
     3781 agcagcgggg gctgccacca cgacggcggc ggtcaatgcg agcagattac ggcgcttctg
     3841 gtccggcacg ttcgcctctc catcccacag agccaacctg gcaggaaaac gaaacagggc
     3901 tgacctgcgt tctgcgcggt cggcagtgct tgcggaaatg tgaccgcgga cggagcgatg
     3961 cccacgtcac cccgttttgc cattcgccag cggctttccg gcgatgaccg tctgctctgt
     4021 cttggaaagg gcgttcagtg tctctgtgga aagattaaaa tgcgcctgca ccaaggccgg
     4081 cggcaggtgg ctcagccatt gcgagaacga gatggagctg tagtaggggc tgcggaaaat
     4141 ctccaggaat accaagtcgg tgctgccggt gttctcaatg taatggccca tcgagcgggg
     4201 cacgtagccg acgtcgccgg cgtggaagtc cttagtgttg atattttcgc cggcggcgaa
     4261 cacgcccatg cggccatcgc cggcgatgta gtactgccat tcatcggcgt ttgggtgcca
     4321 atgcatctcc cgcatcgcgc cggggcgcac gatcacgtgt gccgccgcga tggtcgacgc
     4381 gattgggaaa ttgctcttgt cgacgatgcg gacctcaccg gcgggagaac tgaaattcgg
     4441 cttctgtttc atcagccgat agctgaaggt ttccggcgtg ctgccctgcg gccccttcgc
     4501 cgcctgctgg tcggcggcga gcggtcccgg cacgatggac tggaagatat agagttcatg
     4561 cagcgggatc ttgctgaagg caacggcagg gatgccaaag ttcttcgcca gcacctccgg
     4621 gggcgtgtgg gccatccatt gggtcggtag gaacgtgctg tactcgctga aggcgccgtc
     4681 gtcgaacacc agcaggaatt cggtgccgtc cggctccagg ccctgtatgg aatgcgggat
     4741 tcccgacggg aagttccaca ggtcgccagc cgagacatcg tcaacgaagc tgcggccggc
     4801 ctggtcgaag ccggtgatgc gggcgttgcc atagaggacg atcgcccact cggctggctt
     4861 gtgccagtgc agctcacgga tcccgccggc cgtcagccgc atgtcgacgc cagccagtgt
     4921 cttggcgatc ggcagttccc gttcggtgac ctctcgcgtc cagccgccgt cctgaatgcg
     4981 cttgttcgcc tgttcgaaag ggaaccagaa attcggcagg ctgccatgat cggtggaggg
     5041 gggtgcttcg ctgttgggaa attggctgcc gagcgtcgga tttcgcggtc cgggatcggt
     5101 tatgctcgct ggattgcctt tcgccgcgtc cgatccttgc gctggtgagt ctggattgcc
     5161 gaaccgtgcg gcctgcgcga gggtggttgt catgacgcct ccggctgctg tggcggagag
     5221 aatgttgcgg cgtgagacaa tcatcggtgt gcctttctgc ttcgcgtgtg ccgatccggc
     5281 gtcgaacctg ctacgttcga agcggcggtc ggtgtacttc tccggcaagc acgtttgagc
     5341 gaccgggcgc cgtggcggct ccaccaagcc aaatctgaac gaatgcgact ttccgaacgg
     5401 aagtctcgta agaacctttc gaggccgcgc cggaacaccc tggagcgggc caaaacgagc
     5461 ctgcgcaaag tccttcaccc ccgtgaggcc taatagggcg cgctgctggt tttgttcgat
     5521 tgcggttcgg aattgtggtc aggggccgaa gggcctgccg ttcacactga aagttgcgtt
     5581 cgcggccacc gaacgactga cggcagactc gattagggaa gcagccatgg ttcgtggcgt
     5641 atccctgctc cacccccaac atagcggaac tgcttatgct cgctttatcc acagcatctg
     5701 aagatcaagg caggcgtcgt ctgttgaagg tcgccgctgc aatggccggt tcggcaccat
     5761 tgggtctgtc cgcagcgcag gctgcgccga ccaaggtgca gcctgtgccg caggtcgaag
     5821 ggaagtcgaa cgccggtgcg gccatcggca aggggttgat cggctatatg cttgcgcatg
     5881 agcagttcac ggtacccgag cttgtcagca tcggcagcca ggcggctcat ggcgggttcc
     5941 atctgctagc caccagcgat catttccagc cgtggcaggc aaacgaaggc cactccggcg
     6001 aggcctgggt caccatgggt gcgctgacga cgcacgttca tcaggcctgg atggggacga
     6061 ctgtgacctg tccaatcttg cgctattccc cggccgtggt ggcggaagcc tttgcttctc
     6121 tgagccatct ggcgccgggg cgcattttcc tgggtgtcgg atcgggtgaa gcactgaacg
     6181 aggaagccgc gaccggtgca tggccgaaat ggcgtgggcg gtgggatcgg ctgatcgagg
     6241 cgatcgacat cattcgggcc ctttggtctg gcgagacggt gtcgcacaag ggcaaatatt
     6301 acaacgtcga tgcgaagctt tatgatccgc ccgcgcggcc cattcccctg ctgaccgccg
     6361 cgaacgggcg caaatcgatg cggctggcgg ggcagtatgg tgacgggctg gtcaccgatc
     6421 cgctgacctg gaagcagcac aaggcggagt ggcaggatgc cacgtatgcc gccggcaaga
     6481 atcccgacga catgcctgtg ttggtcgagc aatatgtcgt cgtcggtggt gacaccgagg
     6541 cgcggaaggc cgccgaactg tggcgttttg gaccgcaggc cttcaaatcc ctgtacaacg
     6601 tacgggatcc tgctgaaatc caacggcgcg cggtcgccgg gacgccgctg gatcaggtca
     6661 tgaagggatg gccggttagc accgacccgg cgccgcacat ccaaaagatc catgaacttc
     6721 aggaaagtgg cgtcagcatc gtcaacatcc atgccggcca gtcggatcag cggcgtgtgg
     6781 ttgaattcta cgccacgcgt gtattgccgc acgtcaggca gccttcgccg ccgcggcaat
     6841 cggccatata ggtcctctcg acccatcccg actgcagact gatcacggct tcacttcggc
     6901 caaggccgcc ttgattcgtt tgaatatgca ttggtggggc gccttgtcag gacgccaacg
     6961 cgtcagcttc gtcctatggc gaagccggtc gccggtgacg tggtagaaca gcagctcaac
     7021 aacgagttca gggagcatcg gctcccattc cccgctgagt tcggtgctcc agcggctggg
     7081 accgcccggc gcttttccag tgaagccgag cgctttgcgc agagcctcca gccgcctggt
     7141 caagttcggg cgttcttcat cggtgatggt cgcggtgaaa ccgacatggt cgagcttgcc
     7201 ctgagcatca tatagtccga ggagcaacga tccgactttc cggctggcgc gtttatagcg
     7261 gaagccgccg acgacgcagt cagccattcg aagctgcttt accttgatca tcacccgttt
     7321 gcccgacgcg tatgggcgtg ccagttcctt tgcgaccacg ccatccgtcg ggccgcggcc
     7381 cgcattgcgc aaccatgcct gcgccgcgcc caagtcgggt gtggcggcag aaatgacaaa
     7441 ccgctttgga atcgctgctt cagccatgaa ggctttcagc agccggcggc ggtgctggaa
     7501 ggggcggtcc atgaccacag cgccatcggg cgccgccaac acgtcgaaga caatcaggcg
     7561 cgccggcgtt ttggcggaga gtcgtcggat gcggcttgcg gcgggatgca ggcgcattgg
     7621 atcggtatcc ggcttcacct gtgtccaagt cagcggcatc gaaacggtgg cacccggacg
     7681 ggcgcgtggc gacaaaggtg cgacagccgt cgccatccgg tcattccgca gatagtcgag
     7741 aaagatccgt ccgtcgcgca ggcgctttgt catgttgacg acatagcgat ccgggttttc
     7801 gcgagccagc cgcaggcaga cttcacgggc gaagcttttg gcttccggcc atgtcagctt
     7861 gctgttctcg gcgagcgccc gtgggtgacc atgtgcagcc gttgccaccg gccgtcttgc
     7921 agaagctcac aagaccaagg acatccagcc gctcccgcat ttctttcgcc gcattggccc
     7981 tgcccggaag gcacatctgg cccagggtcc aaatcaaaaa ccaagtggcc aggaacttcg
     8041 tgctgtttcg gctggcagtt ccatgggtaa agctcgagcg cggcgacctg cgctacggcc
     8101 gccagccctt cgacacggtt gatttgcagg tagggcttgc ggtcgccgaa aaacgtcaca
     8161 agttccagaa gattggaggt acccgatatg gcatggcgct gaaagaattg ctcgccgtcg
     8221 ggaaccctga tgatccgcat cgtgtatatt ttgaaggtcg attgccgttg gcgcgactgt
     8281 ccggaggtgt atggtccgca cactacgatc tacaatcggt tcaaccgatg gtcgaaggat
     8341 ggcatctggc agacgatgct ggaagcgctg gtcgagccgg gatcggccgg agcgcagagc
     8401 atcgacagca ccacctccaa ggcccatcgc tgcgccgccg ggggaaaagg ggggcccaag
     8461 agcaggcgat cggacgcagc cgcggcgggc ggacgaccaa gatccatgcc gtcgccaacg
     8521 cttctggccg cctgattgcc ttcgacctga ccgctgggca gatgggcgat attcgctcgg
     8581 cgccaggcct tatcgagaag ctgccgaaag ccgcccaggt gctggccgac accgcctatg
     8641 agagtgataa atttcgcgaa ttcctgattg cacggggcag caccccggtc accaagccca
     8701 atccaacccg caagaaaatc ccacccttcg acgcggcctc ttataaaggc cgcaatgtga
     8761 tcaagcgcgc cttctcccat ttgaaagatt ggcgccgggt cgcaacacga tacgacaaac
     8821 tggccagaag ctttcgcgcc accgtcaccc tcgctcttct cttcaggtgg tggatctaat
     8881 tgagtccgga tggcgggctt gggcgcgtat acacccggga atggcggcaa attgcggctg
     8941 ctatcggtca tgacggcggc tcacaacggc ggatcgcctg ctgccctttc gtcatcgaat
     9001 agaggttgcc caagatccgt ctcctcaacg gcgcatgccg tacatggcag cgccggtttc
     9061 gacgcgaact tcaaccccac atgctgcgca tacgcgcggc gacatcaatg cgaacctgat
     9121 tgaccgccgc ctgcctcgcc acctcggtcg cgagaatggg ccaggtcacg ctctccaaca
     9181 gcgttagcag gctgaccggt atgaaacgtg agcgcgcggc atagatgtga cgatcgccca
     9241 ttgaaggctg cccgtgcgtg aagaagcggt gtggtgtgat cagatgcagc gtgtcctttg
     9301 cccgtgtcat ggccacgtac agcaggcgcc gttcctcctc gatctccgcc gtcgtgccgg
     9361 tgccgaggtc agagggcatg cagccatcca ccacgttcaa cacgaagacc gacttccatt
     9421 cctgaccctt ggctgagtgg atggtagaca agatcaggta gtcctcatcc agcagcggca
     9481 cacccgcctg gtcactcgtg gcgtccggcg gatcgagggt aagatcagtc aaaaagcgcg
     9541 cccgcgacgg atagccggcc gcaatttgct caagctgcag caagtcggcg tgccgcccgg
     9601 aggcctcctc gtgcatccgc tccaaatggg gcgtgtacca gagccgcgcg cagccgatgt
     9661 cgcccggcca gcccgccttg cccgaacgca gttgtagaag cgtagcgacg aggtcagtcc
     9721 atccctcacc agcccgtggc ggcgggtcga tctctgacag cgcttcgatc ggatcgacct
     9781 gactcgctat ggcgtccagc acgcgctgcg ctgatgtcgg acccacaccg ggcaggagtt
     9841 gcagaatgcg gaaggctgcc acccggtcac gcgggttctc cacgaagcgc agcagcgcca
     9901 gcagatcctt ggcgtgggcc gtgtcgagga acttgagtcc gccgaatttg acgaagggga
     9961 tgttacggcg ggtgagctca atttcggtcg ggccactgtg gctggacgtc cggaacagca
    10021 cggcctgttg cttcaactct gtgccgcctt cccggttctc tagcacgcgc tcgaccacgt
    10081 agcgggcttg atcggcctcg tcgcgtacgc tgaccaatgc cggcaattca ctcgactgcc
    10141 gctccgtcca aaggttcttg gtgaagcgtt cggcggcaag gccgatgacg ccattggcgg
    10201 cggccagaat gggctgagtg gaacggtagt tacgatccag cgtgacaatg gcggccggcg
    10261 ggctgaactg gctcgggaag tcgaggatgt tgcgcactga cgctgcccgg aacgcgtaga
    10321 tcgactgggc gtcgtcgccc accactgtca gcccggcacc aaccggcttc aaggccagga
    10381 ggatgctgga ttggaggcgg ttggtgtcct ggtactcgtc gaccagcacg tgatcaaagc
    10441 gctcaccaat atgggctgcc agagccggat cgctgatcat ctgcgcccag taaagcaaca
    10501 gatc
//
LOCUS       DATAVD010000325         3308 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2637996, whole genome shotgun sequence.
ACCESSION   DATAVD010000325 DATAVD010000000
VERSION     DATAVD010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3308
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2637996"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1435
                     /locus_tag="VHX39_05985"
     CDS             <1..1435
                     /locus_tag="VHX39_05985"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3990703.1"
                     /translation="FDNGGGYLSVIDAGTGTVLMFGPNPKLDGTQPAIDAATKQTISQ
                     LVITALRSSDEGTATYMFPRAGQTEAIRKIVPVARFAPWNMAIYGGAYVDDLDASFNA
                     TMIRTSAVGGIILLVMLLAAWLIDSNITRSLGGLRDAMVRLAHGDLAAEIPGTVRGDE
                     VGQMAAAVLVFKTSMNEAESLRMANDTAKVLAVADRKADLNRMAAGFEGQVGSLVGML
                     SSASTELEATARAMTDAADQSKQQAATVAATAEEATSGLQTVAAAAEELSASIGEISR
                     QVAQSSKITGRAVDDTRRTDVIVRILSEGAEKIGTVVGLITNIASQTNLLALNATIEA
                     ARAGDAGRGFAVVASEVKSLATQTGKATEEIGTQVAQIQTATKEVVEAIRNISSTMEE
                     VSTIATAIASAVEEQGAATSEISRNVHQTARAAHEVTVGISAVSHAASETGTSAGQVL
                     RSASDLAKQAEQLSSGVTTFVAGVRAA"
     gene            1628..2689
                     /locus_tag="VHX39_05990"
     CDS             1628..2689
                     /locus_tag="VHX39_05990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HEX3990704.1"
                     /translation="MVPRSNAAEPAGLLASPVRNLVVGVSFVLVVVALATLGYWLAGW
                     PLGDAFYMVVVTVYTVGYGEVHPIDTPLLRGLTIATIVLGCTGMIFLTGALVQFITLN
                     QLNQIFGLRRMNIQIDKLDRHVIVCGFGRLGTALAQELQAGGTSFVLLEQDEAGAAHA
                     RHLGFLCMQGDATDAAVLRDAGVMRARTLATVLPNDAANVFITLRARGLNPDIEIIAR
                     GEQPGTEAMLLQAGANKVVLPTHIGAERIAELIMYQETARFIHGSAQMRDFEQVLHSL
                     GLELELIEAAADSKMVGQTIEAVEQQANGAVFIVQVNRPGTTAMTDPDPGTVIRAGDG
                     VVIVGRGAKARALGGLFNT"
     gene            complement(2727..3143)
                     /locus_tag="VHX39_05995"
     CDS             complement(2727..3143)
                     /locus_tag="VHX39_05995"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX3990705.1"
                     /translation="MSGKQFATGHCLCGAVHFTIRAEPVGTGHCHCKDCQRSSGSGHM
                     SIARFRRTDVTLSGQTASYAVTADSGNTNTRHFCPTCGSRLFGENSGHPELINIAVGC
                     VDDNNWFVPGRVVYAKDRPIWDATTGDAPNFDRMPP"
BASE COUNT          651 a         1017 c         1078 g          562 t
ORIGIN      
        1 gttcgacaac ggcggcgggt atttatcggt tatcgatgcc ggcaccggga cggtgctcat
       61 gttcggcccg aacccgaagc tggatgggac gcaaccggcg atcgacgccg ccacgaagca
      121 gacaatctcg cagcttgtca ttacggccct gcgatcctcc gacgagggca cggcgaccta
      181 catgttcccg agagcgggcc agaccgaagc gattcgaaag atcgtccccg tcgccaggtt
      241 cgcgccatgg aacatggcga tctacggcgg ggcgtacgtt gatgatctgg acgcctcctt
      301 caatgcaacg atgatacgga ccagcgcggt gggcggcatc atactgctgg tcatgctgct
      361 ggcggcatgg ctgatcgaca gcaatatcac ccgctctctg ggcgggctgc gcgatgcgat
      421 ggttcgcctg gcccatggcg acctcgccgc agaaatccct ggcactgtac gcggcgatga
      481 ggtgggccaa atggctgcag ccgtgctggt attcaagacc agcatgaacg aggccgagag
      541 tctgcggatg gcaaatgaca ccgccaaagt gctcgccgta gcggatcgta aagccgacct
      601 gaaccggatg gcggccggct tcgagggcca ggtcggctcg ctggtcggca tgctgtcgtc
      661 tgcctcgacg gagttggagg ccaccgcccg agccatgacc gacgcggcgg accaaagcaa
      721 gcagcaagcc gcgaccgtcg ctgcgactgc cgaggaggcc acgtcaggat tgcagaccgt
      781 cgcagctgct gcggaggaat tatcggcttc catcggcgag atcagccgtc aggtcgcgca
      841 atcgtccaag atcaccggac gggcagtgga cgataccagg cgcaccgacg tgatcgtgcg
      901 catcctgtcc gaaggcgccg agaagatcgg cactgtggtc ggactgatca ccaatatcgc
      961 cagccagacc aacctgttgg cgctgaacgc cacgatcgag gcggcacggg cgggagatgc
     1021 cggaaggggc ttcgctgtcg tcgcctcgga ggtcaaaagc ctggccactc agaccggtaa
     1081 ggcaactgaa gagatcggca ctcaggtggc ccaaatccag accgccacca aggaggtggt
     1141 cgaagccatt cgtaacattt ccagcaccat ggaggaggtg agcaccatcg cgaccgcgat
     1201 cgcctcagcg gtcgaggaac aaggggccgc aacctcggag atcagccgaa atgtgcacca
     1261 gacggcccga gctgctcacg aggtgacggt cggcataagc gcggtgagcc acgccgcaag
     1321 tgagaccggc acctccgctg ggcaggtcct gcggtcggca tccgatttgg cgaaacaagc
     1381 cgagcaactc tccagcgggg taacgacctt cgttgccggc gtaagggctg cgtaaaccgt
     1441 tcatcaggca cgcgacccgc caaagattgc ggcctcagac ccaggctgac cgagacgatc
     1501 cccgacaggg tcaggcgagc gccatgacgc cgcgcacctc ggccgcgaag gtcgttgctc
     1561 ggcacccgga attccaacac tctgcggcgg tcacgatgaa gggacgccgc gattaacaat
     1621 gccccggatg gtgccccgtt cgaatgcggc agaaccggcc ggactgctgg cctcgccggt
     1681 gcgcaatctg gtggtcggcg tcagcttcgt gctggtggtg gtggcgctcg cgacactggg
     1741 ctactggttg gccggttggc cgctcggcga tgcgttctac atggtggtcg taacggtcta
     1801 tacggtcggc tacggcgagg ttcatccgat cgacacgccg ttgttgcgag gcctcacgat
     1861 cgcaaccatc gtgcttggct gcaccggcat gatcttcctg accggtgcgc tggtgcaatt
     1921 cattacgctc aatcaactca accagatttt cggtctcagg cgcatgaaca tccagatcga
     1981 caaactcgac cgccacgtca tcgtttgcgg cttcggccgg ctcggcacgg cgctcgcgca
     2041 ggagctgcag gctggcggca caagcttcgt tctgctcgag caggatgaag ctggcgcagc
     2101 ccatgccagg cacctcggat ttctttgcat gcaaggcgac gccaccgatg cggcagtgct
     2161 gcgcgatgcc ggcgtgatgc gcgcgcggac cttggccacg gtgctgccga acgacgctgc
     2221 caacgtcttc atcaccttgc gcgcccgagg tctcaatccg gacatcgaga ttattgcgcg
     2281 cggcgaacag ccaggcaccg aggccatgct gctgcaggcc ggagcgaaca aggtcgtgtt
     2341 gccgacccat atcggtgccg agcgcatcgc cgaactgatc atgtatcagg agaccgcccg
     2401 gttcatccac ggttcagccc agatgcgcga cttcgagcag gtgctgcatt cgctcggcct
     2461 ggaactggaa ctgatcgaag cagccgccga cagcaagatg gtcggccaga cgatcgaggc
     2521 ggtcgaacaa caagccaacg gggcagtgtt catcgtgcag gtcaatcgtc ccggaacaac
     2581 cgcaatgact gatccggacc ccggcaccgt gatccgggcg ggtgacggcg tggtgatcgt
     2641 cggccgcggc gccaaggcac gcgcgcttgg cggtttgttc aacacgtagc gagcgcacgg
     2701 gtccaaggtc ggatgttgct cagccgttat ggtggcatgc ggtcgaagtt gggagcatcg
     2761 cccgtggtcg catcccagat cggccggtct ttcgcgtaaa ccacccggcc aggcacaaac
     2821 caattgttgt catcgacaca accgaccgcg atgttgatca gctcggggtg gcccgagttc
     2881 tcgccgaaca atcggctgcc gcatgtcggg cagaagtgtc gcgtattggt gttgccgcta
     2941 tcggcggtca cggcgtagct ggcggtttgg ccgctgagcg tgacgtcggt tcggcggaaa
     3001 cgggcaatcg acatgtggcc ggagccagaa gagcgctgac agtccttgca atggcagtgc
     3061 ccggtgccaa ccggttcggc acggatggta aagtgaacgg caccgcacag gcagtggccg
     3121 gtggcgaatt gtttgccgga catggtgtct ccttccaggc aggaaccaga tcatgatcac
     3181 gggaggcacc agtaacgatg ctccccaacg tcaactgtca cggcacctgc gtgcggatgc
     3241 cggactggcg attgaacacc agcccggcat cctgcggtca ttgcaaagcc cggtcgttac
     3301 tcggcagc
//
LOCUS       DATAVD010000326         6036 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2821906, whole genome shotgun sequence.
ACCESSION   DATAVD010000326 DATAVD010000000
VERSION     DATAVD010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6036
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2821906"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1437
                     /locus_tag="VHX39_06000"
     CDS             <1..1437
                     /locus_tag="VHX39_06000"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3990706.1"
                     /translation="VNWCYETEPDPGAGGRRIFWPRGKVLGGSSSINGMVYIRGQHED
                     FDHWRQLGNQGWAASDVLPYFRRAEHQTRGEDAFHSTGGPLCVSDVKDAHPLCEAFIK
                     ACNDAGYQRNDDFNGRDQEGVGYHQTTTKNGKRCSTAVGYLHPVRSRSNLQVITGAHT
                     QKVLFDGKRAVGVAFRQNGADRSVRARKEVILCGGAIGSPQLLLLSGVGPQDQLAEFG
                     IPVVQHLPGVGQSLQDHYSAPIKLKCSFPITLNDVMQSKFKKLKAGLDYFMFRRGPLT
                     VITADVALFARTRPELATPDVKLSIATFSADRPQDGLHSWPGFTLVVYQLRPDSRGEI
                     RLKSANPGDPPAMRPNYLSAATDQRTIVDGLKLGRALLASSPMQAFIASEYVPGPEVT
                     TDEQWLDYARNNGGTVFHPTSTCKMGTDAMAVVDPELRVRGIEGLRVVDASVMPTVVS
                     GNTNAATIMIAEKASDLVRRRSPLAAAA"
     gene            complement(1455..2645)
                     /locus_tag="VHX39_06005"
     CDS             complement(1455..2645)
                     /locus_tag="VHX39_06005"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEX3990707.1"
                     /translation="MATVSDMTAQGIYQNFAIDRVVYGKPAAEALVAEAARLGAKRVF
                     LVVSRTLDTETTWVHEMRTVLGARYAGSFAGVPSHTPRQSVLDAAAHAREVNADLIVT
                     FGGGSGTDAGKMIRLALKHDIRAIEDFDRFVVRVAPDGSRAVLDYDAPDVPQIAIPTT
                     LSGGDFNPSAGATDTRTMLKEIFRHPRLVPSVIVLDPAVTVRTPQRLWLSSGVRAFDH
                     AVETVCAPAADARSRLEAVSAISLLARALPRTHQEPNDLGARLDAQLAVWLSMEHNRF
                     GISMGASHGIGHVLGGTCNVPHGYTSCVMLPAVLRYNESANVDRQAMVAEAFGRTGEP
                     AWRVVHEFVAGLGLPRSLAEVSVTAEKFETVAKAAMLDHYLHTNPRPIDGVGDIMEIL
                     RMAA"
     gene            complement(2629..3171)
                     /locus_tag="VHX39_06010"
     CDS             complement(2629..3171)
                     /locus_tag="VHX39_06010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990708.1"
                     /translation="MARIPQIAGKADVPEAQQYVVDQVLEVFGRVRGPFSVLLHSPAL
                     AERLLPMVPFNREMTVVDAPLRLVGILATVREKDANYVWAAQVRSARENGVSEATIDV
                     LRAKGDVNALPAEQRDVATYARQLARTNRVDQSVFDTLLKRHGTKWLVELTAIMSFYG
                     ALSGVVNAFEVPAPDDGDRF"
     gene            complement(3171..3809)
                     /locus_tag="VHX39_06015"
     CDS             complement(3171..3809)
                     /locus_tag="VHX39_06015"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEX3990709.1"
                     /translation="MDDVFEIMSTTRSMRRLKPDPVPDELIEKILHAGLGAANGGNTQ
                     KWRFMVVKDPAKKKAVQEWYKKAFDEVVGPRYASSAPPPGSDPSKYKRQHGAVEYLTD
                     HYHEAPVWIVACLEDGPNPGRSAGASVYPAVQNMLLAIRALGLGSTLTTRHLQFEKET
                     EAALGLPPGVHSYAILPVGYPMGKFGPTGRGKMSEFVYGDKYGETWAPLAGK"
     gene            complement(3824..4618)
                     /locus_tag="VHX39_06020"
     CDS             complement(3824..4618)
                     /locus_tag="VHX39_06020"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX3990710.1"
                     /translation="MDFTGKVALITGGGGGIGRATALGFALRGAKVMVVDHDAESGRV
                     TTEVVAQQGGESKFTRADVTKSASVQDYVKATLDTYGRIDCFFNNAGIEGKVVPTQDY
                     DEAVFDQVIAVNLKGVFLGLRYVLPEMLKQGSGTVVNTASVAGLFGGPGMPAYVASKH
                     GVLGLTKVASSDVAPHGIRVNAVCPGPVETRMMRSLETQRNPNDPEGVHRAYSATMPT
                     GRYTLPEEVAGVVLYLSSELSGNVTGTHIVVDGGRSGSGGAPATRR"
     gene            complement(4857..5927)
                     /locus_tag="VHX39_06025"
     CDS             complement(4857..5927)
                     /locus_tag="VHX39_06025"
                     /EC_number="1.1.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009027 - tartrate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0046395 - carboxylic acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tartrate dehydrogenase"
                     /protein_id="HEX3990711.1"
                     /translation="MARKHRIAVLPGDGIGKETVPESLKVLDAASRKFGFGLELTHFD
                     WSCETYKATGSMMPADGLDQLAKSDSVLLGAVGWPGVPDHVSLWGLLIPIRRGFDQYV
                     NLRPCKLLPGVRTPLANRTEADIDFYVVRENTEGEYSSVGGRMFEGTEREFVSQQSVF
                     SRVGVDRILKFAFELAMTRPKKHLTSATKSNGIIHTMPYWDERFAAMGQAYPEIRTDQ
                     FHIDILCAHFVQHPDWFDVVVGSNLFGDILSDLGPAVAGSIGIAASANINPEKKFPSM
                     FEPVHGSAPDIAGKFICNPIGQIWSAALMLEHLGEAAAGKAIVDAIETLLRESGPKTR
                     DMGGQAGTADVGTAIAQLVAAG"
BASE COUNT         1189 a         1932 c         1757 g         1158 t
ORIGIN      
        1 gtgaactggt gttacgaaac cgaacccgat ccgggcgccg gcgggcgccg gattttctgg
       61 cctcgcggca aggtattggg tggttcatcg tcgatcaacg gcatggtcta catccgcggc
      121 cagcacgaag acttcgacca ctggcgtcaa ctgggcaatc aagggtgggc ggcctccgac
      181 gtgttgccgt atttccgccg tgccgaacat caaacccgcg gcgaggacgc gttccattcc
      241 accggcggac cattatgcgt gtccgacgtg aaggatgcgc atccgctgtg cgaggccttc
      301 atcaaagcct gcaacgacgc cggctatcag cgcaatgacg acttcaatgg acgcgatcag
      361 gagggcgtcg gttatcatca gaccacaacg aaaaacggca agcgttgctc cacagcggtg
      421 ggatatctgc atccggtgcg cagccgaagc aatcttcagg tgatcaccgg tgcgcatacg
      481 caaaaggtgc tgttcgacgg taagcgcgca gttggcgtgg cgttccgaca gaatggcgcc
      541 gaccgttcgg tacgtgcacg caaggaagtg atcctgtgcg gcggcgcaat cggctcgccg
      601 cagctattgc tgctgtcagg cgttggaccg caggatcagt tggcggaatt cggcattccg
      661 gtggtgcagc atttgccggg cgtcgggcag agcctgcagg atcattactc ggctccgatc
      721 aaactgaaat gctccttccc catcacgctc aacgatgtga tgcagagcaa attcaaaaag
      781 ctgaaagccg gcttggacta cttcatgttt cgacgcggtc cgctgacggt cattaccgct
      841 gatgtggcgc tgtttgcgcg cacccggccg gagcttgcga cgcctgacgt caaactctca
      901 atcgccacgt tcagcgccga ccggccgcag gacggattgc atagctggcc ggggttcacg
      961 ttggtggtct atcaattgcg gcccgacagt cgcggcgaaa tccgattgaa atccgccaat
     1021 cccggcgatc cgccggccat gcggccgaat tacctgtccg ccgcaacaga ccagcgcacc
     1081 attgtcgacg gcctcaaact gggccgcgcc ttgctggcgt cgtcacctat gcaggcgttt
     1141 atcgcatccg aatatgttcc gggtccggaa gtgacgaccg atgaacagtg gttggattat
     1201 gcgcgtaaca atggcggcac ggtgtttcat ccgaccagca cctgcaagat gggcaccgat
     1261 gcgatggccg ttgtcgatcc ggaacttcgg gtccgcggca ttgaggggtt gcgggtggtc
     1321 gatgcttcgg tgatgccgac ggttgtgtca ggaaacacca acgcggcaac cattatgatt
     1381 gcggagaaag cctcggatct ggttcgccgg cgttcgccct tggcggcggc ggcttagtgg
     1441 agggcaggtc cccgctacgc cgccatccgc aaaatctcca tgatgtcacc gacaccatca
     1501 atcggccgtg gattggtgtg caaatagtga tccaacatgg cggccttcgc caccgtctcg
     1561 aatttctccg cggtgacgct gacctcggcg aggctgcgcg gtaaccccag accagcgacg
     1621 aattcgtgaa cgacgcgcca ggccggttcg ccggtccgcc cgaacgcttc cgccaccatg
     1681 gcctgacgat ccacgttggc actctcgttg tagcgcaaga ccgctggcag catcacgcag
     1741 gatgtataac catgcggaac attgcaggtg ccgccgagga catgaccgat gccgtggctg
     1801 gcgcccatcg aaataccgaa acggttatgc tccatcgaca gccataccgc gagttgcgcg
     1861 tccagtcgtg cgcccaggtc gttcggctcc tggtgggtgc ggggcaacgc gcgggcgagc
     1921 agggaaattg ccgacaccgc ctccaaccgc gaacgcgcat ctgcggccgg agcacaaacc
     1981 gtttcaaccg cgtgatcaaa tgcccgaacg ccggaggaca gccacaaccg ttgcggcgtc
     2041 cgcaccgtca ccgccggatc gagcacgatc acgctcggaa ccagtcgcgg atgccgaaaa
     2101 atttccttca gcatcgtgcg cgtatcagtg gcgccggcgg acgggttaaa atcgccacct
     2161 gacaaggtcg tcggaatggc aatctgcggc acatccggtg catcgtaatc gagcaccgcg
     2221 cgcgaaccgt ccggcgcaac ccggaccaca aaccggtcga aatcctcgat cgcacggatg
     2281 tcgtgcttta atgccaaccg gatcatcttg cccgcatcgg tgccggagcc gccgccgaat
     2341 gtgacaatca ggtcagcgtt cacctcacgc gcgtgcgccg ccgcatccag caccgactgg
     2401 cgcggtgtat gcgacggtac gcccgcgaaa cttccggcat aacgcgcgcc cagtacggtg
     2461 cgcatttcgt gaacccaggt ggtttcggta tcgagcgtgc ggctgacaac gaggaaaacg
     2521 cgtttcgcac ccagccgggc agcttcggca acgagggctt ccgccgccgg tttgccgtaa
     2581 accacccggt cgatggcaaa gttctgataa atgccctggg cggtcatatc agaaacggtc
     2641 gccatcgtcg ggtgccggca cctcgaacgc attgaccacg cctgacagcg caccatagaa
     2701 actcataatg gcagtcagtt cgaccaacca tttggtgcca tgccgcttca gcaacgtgtc
     2761 gaacaccgac tgatcgacgc gattggtgcg agccagttgc cgagcgtaag tcgcgacatc
     2821 ccgctgctcg gccggcaagg cgtttacatc ccccttggcc cgcaacacat caatcgttgc
     2881 ctcacttacc ccattttccc gagccgacct tacctgagcc gcccagacat aattcgcatc
     2941 cttttcgcgc acggttgcca ggatgcctac caaacgtaac ggcgcgtcaa ccacggtcat
     3001 ctcgcggttg aacggcacca tcggcaacag gcgttcggcg agtgcgggac tgtgcagcag
     3061 gacgctgaag ggtcctcgga cacgaccgaa gacctccagc acctgatcga cgacgtattg
     3121 ctgcgcttcc ggaacatccg ccttgccggc gatttgcgga atgcgtgcca tcacttgccg
     3181 gccagtggag cccacgtctc tccatattta tcgccataga cgaattcgga cattttgccg
     3241 cgcccggtcg gaccgaattt gcccattgga taaccaaccg gaaggatcgc ataggagtgc
     3301 acgccggggg gcaaaccaag cgccgcttcg gtttcctttt cgaactgcag atgccgtgtg
     3361 gtcagggtcg agccaaggcc gagtgcgcgg atcgcgagca gcatgttctg cacggccgga
     3421 tacactgacg caccagccga ccggcccgga ttcgggccgt cttccaggca ggcaacgatc
     3481 cacaccggcg cttcgtgata gtgatccgtc agatattcca ccgcaccgtg ctggcgttta
     3541 tattttgacg gatcgctgcc cggcggtggc gcgctggagg cgtaacgcgg cccgacaacc
     3601 tcatcgaacg ctttcttgta ccactcctgg acggccttct ttttggccgg atccttgacc
     3661 accatgaagc gccatttctg cgtattgccg ccgttggccg cgcccagtcc ggcgtggagg
     3721 attttctcga tgagttcgtc cgggacggga tccggcttca accgccgcat cgagcgagtg
     3781 gtgctcatga tttcaaacac gtcgtccatc ttgacctcct gtattagcgc cttgtcgccg
     3841 gcgcgccgcc ggacccggag cggccgccat caaccacgat atgtgtgccg gttacgttgc
     3901 ccgaaagctc ggacgaaaga tacagcacga ccccggcgac ttcctcgggc agcgtgtaac
     3961 gcccggtcgg catggtggcg ctgtaggcgc gatgcacgcc ctctgggtcg ttaggattcc
     4021 gttgcgtctc aagcgagcgc atcattcgcg tttccaccgg tcctgggcag acggcgttga
     4081 cccggatgcc gtgcggcgcc acgtcggatg acgcgacttt cgtcaaaccc agtacgccgt
     4141 gtttcgatgc gacataggcg ggcatcccgg gaccgccaaa caaccccgca accgaggctg
     4201 tgttgaccac cgtgccgctg ccttgcttca gcatctccgg cagcacgtac cgcaacccca
     4261 gaaacacacc ctttaagttg accgcgatga cctgatcgaa caccgcttca tcgtaatcct
     4321 gggttggcac aactttgcct tcgatgccgg cgttgttgaa gaagcagtcg atccggccat
     4381 aggtatccaa cgtcgctttg acgtagtcct gcaccgaggc cgatttcgtt acatcggctc
     4441 gggtgaactt cgactcaccg ccttgttgtg cgacgacttc ggtggtgacc ctgccggatt
     4501 ccgcgtcatg atcgacgacc atgactttcg cgccgcgcag agcgaagcca agcgcagttg
     4561 cgcgaccgat cccgccgccg ccgccggtga tgagcgccac ttttccggtg aaatccatgc
     4621 tgttgcttcc tcctgagccg cgactgtagc ccgcgtttca ggctcaatcc aggccggacc
     4681 cgccgccacc agaaagaaag ctccgtgccc ttagtgaact ccgcgtccgt tgtgatttat
     4741 gagacttctg cacgcacacg gacatgtgga gcacacccca atccaacgcc cgacgacgcc
     4801 gcatcgcccg caatccacaa aggtctcagg ttcactaagg ccacgaagct tgcttactac
     4861 cccgctgcca ccagttgcgc gatcgcggtt ccgacatcgg cggtgcccgc ctgtcctccc
     4921 atgtcacgcg tcttcggccc actctcgcgc aacaatgttt cgatcgcgtc gacaatcgcc
     4981 ttgcccgccg cggcctcacc cagatgttcc agcatcaacg cggcagacca gatctggccg
     5041 atcggattgc aaatgaattt gccggcaatg tcgggggcgg aaccgtgcac cggctcgaac
     5101 atcgagggaa atttcttctc gggattgatg ttggcggacg ctgcgatgcc gatcgagcct
     5161 gcgactgccg gacccagatc gctgaggata tcgccgaaca ggttcgatcc gacaacgaca
     5221 tcgaaccagt cggggtgttg cacgaaatgc gcgcacagaa tgtcgatatg gaactgatcc
     5281 gtgcggattt cgggataagc ctggcccatc gcggcaaacc gttcatccca gtatggcatc
     5341 gtatggatga tcccgttcga ctttgttgcc gacgtcagat gcttcttcgg ccttgtcatc
     5401 gccagctcga acgcgaactt caggatccgg tccacaccca cgcgggaaaa cacgctttgc
     5461 tgcgagacga actcgcgctc ggtgccttcg aacatgcggc cgccgacaga ggaatactca
     5521 ccctcggtgt tttcccgcac cacatagaaa tcgatgtcgg cctcggtacg attggccaat
     5581 ggcgtgcgca cgcccggcag caacttgcac ggccgcaggt tgacatattg gtcgaagcct
     5641 cggcggatcg ggatcagcag cccccacagc gacacgtgat ccggcacgcc cggccagccg
     5701 accgcgccca gaagtaccga gtcggacttc gccaactggt ccagtccgtc cgccggcatc
     5761 atcgagccgg tcgccttata ggtctcgcac gaccaatcaa aatgcgtcag ttccagcccg
     5821 aagccaaact ttcgcgacgc cgcgtcaagc actttcaggc tttccggcac agtctccttg
     5881 ccgatgccgt cgccgggcag gaccgcgatg cggtgtttgc gggccatctg gactgtctcc
     5941 tggtttagtt gtcgggtatg aggccccggg tttcacatat cgggtttcag atagaggaca
     6001 gagcgcaaat ggccaagcca gcacagggca ccaccg
//
LOCUS       DATAVD010000327         5102 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1707379, whole genome shotgun sequence.
ACCESSION   DATAVD010000327 DATAVD010000000
VERSION     DATAVD010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5102
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1707379"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(88..1320)
                     /locus_tag="VHX39_06030"
     CDS             complement(88..1320)
                     /locus_tag="VHX39_06030"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX3990712.1"
                     /translation="MHRSSFVDQEILARERALIFDKSWLFAGHASEFPNPGDFVTRSV
                     GGRPLILAHGDDGEIRVFLNTCRHRGNLVCREQKGRGSTFRCFYHGWVFGNRGELKAV
                     PGEEAYSDAFDRDALGLEPVPRMHNHRGCIFISFDPDIESFASYMADALPLLNNTLDL
                     GEMEFAHGQFKYSMRANWKLLVENSMDGYHLAFTHERWVDQWLPSEGIARAPAPPPGP
                     ERNMRWGAAALGHGHTTTSLPVAGRQPPYTSYLEKYAGDELKRSYEALAKRFGPEKSR
                     VVQGGAGNYLIFPNLMVIDGWFVFRTFYPTSPDYMEINAWACLPKDDPPALRKARLDW
                     YLAFQGPGGFATPDDVEGLEGCQMGFAAHKEVEWSDISRGMKGNMKGGPGELQMRVFW
                     REWQARLTTGGHAADTGE"
     gene            1682..2071
                     /locus_tag="VHX39_06035"
     CDS             1682..2071
                     /locus_tag="VHX39_06035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HEX3990713.1"
                     /translation="MTNIDGTWRFVRATARDDAGNPRPLTYDGQGMGRIVIGDGRMAV
                     MMIDWRHDVPGGQKREYSGYTGTYTFNGEQLVTTVDAAPDASRIGTKQPRGVRFENGL
                     MILIPPPRVVDGVTEHREIAWEKVSDV"
     gene            2163..3224
                     /locus_tag="VHX39_06040"
     CDS             2163..3224
                     /locus_tag="VHX39_06040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HEX3990714.1"
                     /translation="MSNFLYVCLQDENKIAAFSMDAATGQLTRQADFPAMGGPSVLAI
                     SLDRRVLYVGHRNEPSISSFRIDQGGGTLTPLGAIAPPHAPTFLALDRTGAWMLSAYY
                     QGGFVAVHRIAADGSVVDEPVEWLATEVGAHAVQTDPTNRFAFVPHIARLNDNVLEPQ
                     RDNPGPNMIAQFRFDAGTGRLHPNSPFRIEPAERSGPRHLCFHPSQNLVFFSNEQGCG
                     ITGYRLDPAHGTLTAEQTVSSLPPGHAVRNTCSQIHLTPSGRFLYVANRGHNSIAGFS
                     VDASTGRMALVGHVPTEAVPGAFALDPLGKFLFAAGTASGRLAAYRIDQETGVLIPTA
                     TYEVGRRPAALLLTDPAFA"
     gene            3288..4421
                     /locus_tag="VHX39_06045"
     CDS             3288..4421
                     /locus_tag="VHX39_06045"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3990715.1"
                     /translation="MPTVHPQIQKARDLAPLVAAASVENDENRQLTRPVVKALIDGGF
                     FTMLKTKSVGGMELKPSIFAQVTEAIASADGSTGWVVCQSNGCSTTSAYLAPHLALEI
                     FGRPDGIVAWGPPGSPYEATQVEGGYRISGKWRFMSGSQNATWLGAHLRVAGTKETKT
                     FLYPKSSATFHDIWHTLGLRGTASNEYSVCDLFIPNERAIYRDDPRDRRSDSPLYRFS
                     SNQLYSIGFGGVALGIARGTMDAFLALPQEKTRRGAGKPMVENNVVQSHVAQSEARWR
                     SARYFLHAAADEALETIEEKGAMDPDQRTRLRLASTWAIQSSREIVNTLYHDCGSMAV
                     FEENPFERRLRDIHTVAQQGQGRILHYETVGQILLGLPPDNIF"
     gene            complement(4599..4934)
                     /locus_tag="VHX39_06050"
     CDS             complement(4599..4934)
                     /locus_tag="VHX39_06050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990716.1"
                     /translation="MIVRIYTGDDSQTHFEDLPPPGNETQNVALQASGNLVFRSFPAD
                     YFSDWHTAPRQQYIFILSGLMEIGIGDGTARRFGPGDVVLADDLTGKGHTTRSLGVPR
                     ISATVAVAV"
BASE COUNT          985 a         1621 c         1556 g          940 t
ORIGIN      
        1 aactttacca tgtccccagc tcccacccat tgggggacct tgaatcgcac ccgccgtgac
       61 cggatcaaga cctaattggg tgtgcagcta ctcccccgta tccgccgcat gcccccctgt
      121 ggtcagtcgc gcctgccact cccgccagaa cacccgcatc tgcaactccc ccggcccacc
      181 cttcatattc cccttcatgc cgcgcgaaat gtccgaccat tcgacttcct tgtgcgcagc
      241 gaagcccatc tggcacccct ccagcccctc cacgtcgtcc ggcgtggcga acccccctgg
      301 gccctggaac gcgagatacc agtccagccg ggccttgcgc agcgctggcg gatcgtcctt
      361 cggcagacag gcccaggcgt tgatctccat atagtcaggg ctggttggat agaaggtgcg
      421 gaagacgaac cagccgtcga tgaccatcag gttcgggaaa ataagatagt tccccgcgcc
      481 gccctggacc acccgagact tttcgggacc aaaacgtttc gccaacgcct cgtacgatcg
      541 tttcaattcg tcgccggcat atttctccag atacgacgtg taaggcggtt gccgtccggc
      601 caccggcagc gatgtcgtgg tatggccatg gcccagagcc gccgcgcccc atcgcatgtt
      661 acgctccggg cctggtggtg gcgcgggcgc ccgtgcgatt ccctccgacg gcagccattg
      721 gtcgacccag cgttcatgcg taaaagcgag gtgatagcca tccatgctgt tctcgacgag
      781 cagcttccag ttcgcccgca tcgaatattt gaactggcca tgggcgaact ccatctcgcc
      841 gaggtcgagc gtgttgttca acagcggcag cgcgtcggcc atgtagcttg caaagctttc
      901 gatatccgga tcgaagctga tgaagatgca gccccggtga ttgtgcatcc gaggcaccgg
      961 ttccaacccg agcgcgtcgc gatcgaacgc gtcgctatag gcttcctcgc ccggaacggc
     1021 cttcagttcg ccgcgattgc cgaacaccca gccatgataa aagcagcgaa atgtgctgcc
     1081 cctgcccttt tgctcgcggc agaccaggtt gccgcgatgg cggcaggtgt tcaggaagac
     1141 gcgaatttcc ccgtcatcgc catgcgcgag gatcagcgga cgtccaccca cggagcgagt
     1201 cacgaaatcg ccgggattcg gaaactccga ggcgtgacca gcgaacagcc agctcttgtc
     1261 gaagatcagg gctcgttctc gcgccagtat ttcctggtcg acaaaagagc tgcgatgcac
     1321 gcggaatatt ccgttctcgc gatcatcgag aaccaatccg gaatacctgc cgccgtcgtt
     1381 tatcatttct tccctttcac gcggagggcg ccgccgtccg gtattggaac gcctcgtcga
     1441 cggtgggact catgcgacgt cgcccgcctc accggtgcga gcggtcagac cttttcgccg
     1501 tttgtccagg ctgtcaatcc gcactgggcg gcgcgttcgt attgtcagcg ttttgtgatc
     1561 gcgctgtcgg gggcatcacg ccaggggccg ccgaaaccat tgccgggcag gccaggacgg
     1621 cttgaccggc cagccgatcc ccgcactgtg cgaggtgcgt gacaacaggg ggggtgggac
     1681 catgaccaac atcgacggaa cctggcggtt tgtgcgagcg acagcgcgcg atgacgccgg
     1741 gaacccgagg cccttgacct acgatggcca gggcatggga cgcatcgtca tcggtgacgg
     1801 gcgtatggcg gtcatgatga tcgactggcg ccacgacgtt cctggcggcc agaaacggga
     1861 atacagcggc tataccggca cttacacatt caacggcgag cagcttgtca cgaccgtcga
     1921 tgccgcgccg gatgcgagcc ggatcggcac gaaacagccg cggggggtgc ggttcgagaa
     1981 cgggctgatg attctgatcc cgccaccgcg ggtggtcgac ggtgtgaccg aacaccgtga
     2041 aatcgcctgg gagaaggttt cggacgtttg aggcgatgca cgggccaggc tgcggtcgtg
     2101 gacccggtag gaacatgcgc ctcggcccat cgtggtgacg gcaaagcgag gaagaccaac
     2161 acatgtcaaa ctttctttat gtctgccttc aggacgaaaa taagatcgcg gccttctcga
     2221 tggacgccgc taccggacaa ctgacacgcc aggcggactt ccccgccatg ggcgggccat
     2281 cggtgctggc aatcagcctg gatcgtcgcg tgctgtacgt tggccatcgt aacgagccct
     2341 cgatctccag cttccggatc gaccaaggcg gcggtacatt gacgccgctg ggcgccatcg
     2401 cgccgccgca cgcgccgacg ttcctggcgc tcgaccggac cggcgcctgg atgctgtcag
     2461 cgtactatca aggcgggttc gtcgccgtgc atcgcatcgc ggcggatgga tccgtggtgg
     2521 acgaaccggt tgaatggttg gcgaccgaag ttggcgcgca cgcggtgcag actgatccga
     2581 cgaaccgttt tgccttcgtg ccgcacatcg cccggctgaa tgacaatgtc ctggaaccac
     2641 agcgtgacaa ccctggcccg aacatgatcg cacagttccg gttcgatgcc ggaacaggcc
     2701 ggttgcaccc caactcccca tttcgcatcg agccagccga acgatcagga ccgcggcatc
     2761 tctgctttca tcccagtcag aacctggtgt ttttctcgaa cgagcagggt tgcggcatca
     2821 ccggttatcg cctggatccg gcgcatggca ccctcacggc ggagcagaca gtttcgagtt
     2881 tgccgccagg tcatgccgtg cggaacacct gttcacagat tcacctcacc ccatcaggac
     2941 gcttcttgta cgtggcgaat cgcggccata acagcatcgc cgggttcagc gtggatgcat
     3001 caaccgggcg aatggcgctg gtcgggcatg tgccgaccga agctgtaccc ggtgcattcg
     3061 cgctggatcc gttgggaaag tttctgttcg ctgcggggac cgcgtcaggt cgtttggccg
     3121 cgtatcgcat tgaccaggaa accggtgtgt tgatcccaac ggcgacgtat gaagtgggcc
     3181 ggcggccggc ggctttgttg ctgaccgatc ccgccttcgc ttgaccaaat ctccggccgc
     3241 atgagtaatc caccgacacc gcgccgtcgc ggacctggag aaacaccatg ccaaccgtcc
     3301 acccgcaaat tcagaaggcc cgcgatctgg cgccactcgt cgccgcggcc tcggtggaga
     3361 acgacgagaa ccgtcaactc accagacctg tggtcaaggc cctgatcgac ggcggcttct
     3421 ttaccatgct gaagaccaaa tcggttggcg ggatggaatt gaagccctcg atatttgccc
     3481 aggtgaccga ggcgatcgcg agtgccgatg gatcgaccgg atgggtggtg tgtcagagca
     3541 acgggtgctc caccaccagc gcctatctgg cgccgcacct ggccctggag attttcgggc
     3601 gccccgacgg catcgtggcc tgggggccgc ccggttcgcc gtacgaggcc acccaggtcg
     3661 aaggcggata tcgcatcagc ggcaaatggc gctttatgag tggcagtcag aacgccacct
     3721 ggttgggagc gcatctacgg gtcgcgggca cgaaagaaac gaagaccttt ctctatccga
     3781 aatcgagtgc caccttccac gacatctggc acacgcttgg cttgcgcgga acggccagca
     3841 acgaatattc cgtgtgcgat ctgttcatcc cgaacgaacg tgccatctat cgcgacgatc
     3901 cgcgcgaccg gcgaagcgac agcccgctgt atcgtttcag cagcaaccaa ctctactcga
     3961 tcggcttcgg cggcgtcgca ctgggcatcg cgcgcggaac aatggatgcg tttctggcat
     4021 tgccgcagga aaagactcgc cggggcgcgg gcaagcccat ggtggagaac aatgtcgtcc
     4081 agtcccacgt ggcccaatcc gaggcgcggt ggcgctccgc gcgctacttc ctgcatgcgg
     4141 cggcggatga ggcgctcgaa acgattgaag aaaagggcgc gatggaccca gaccagcgca
     4201 cccgcctgcg ccttgcctcc acctgggcca ttcaatcgtc gcgggagatc gtcaatacct
     4261 tgtaccacga ttgtggctca atggcggtgt tcgaggaaaa cccgtttgag cggcggttgc
     4321 gcgatatcca caccgtcgcg cagcaaggcc agggccggat actgcactac gagacggtcg
     4381 ggcagatcct gctcggactg ccgcccgaca acatcttctg atcacgagca tgcgccgcat
     4441 gccatcggga acagcgggtc accggcatca accacgataa atcgaccaaa ccgatccgcg
     4501 cacgaaactg ggcagttctg gcggcaactc acaccagggt gcctcgcctt gttcagtggc
     4561 gcccgagtgc ccggcgtatc gtccgatgtg ggtgcgggtc agacagccac cgcgacagtg
     4621 gcgctgatcc gcggaacccc caacgagcgc gtcgtgtgac ccttgcctgt gaggtcatca
     4681 gcgaggacca catcacccgg tccaaaacgg cgcgcggtgc catcaccgat cccgatctcc
     4741 atcagcccag agagaatgaa gatgtattgt tgccggggcg cggtgtgcca atcgctgaaa
     4801 tagtccgcgg gaaaactacg gaacacgagg ttgccactgg cctgaagcgc aacgttctgg
     4861 gtctcgttgc ccggcggcgg gagatcttca aaatgggtct ggctgtcgtc gccggtatat
     4921 atccgtacga tcatgcgcga cactcctgtt cacggaaggc gcatcgtgcg cgcaaaagag
     4981 tcctgtcgca aatcggcgtg tggggatagc cccagggcaa ctttcgcgac gacgagtctg
     5041 ggggatcagc cggcgatgat ctcgttcagt tccggctgac ctcttgtaat cgaccgcgag
     5101 cg
//
LOCUS       DATAVD010000328         3870 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_588447, whole genome shotgun sequence.
ACCESSION   DATAVD010000328 DATAVD010000000
VERSION     DATAVD010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3870
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_588447"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1143
                     /locus_tag="VHX39_06055"
     CDS             <1..1143
                     /locus_tag="VHX39_06055"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990717.1"
                     /translation="VVLRHARGEAAIKIGMPLALTGPAGEIGLQMRHGAEFWAKELNA
                     KGGLIGQQIELHVEDTAGDPATCVRKAQLVVERDNCHLLFGMVLSSEALAVVPKLAEW
                     NAIFMSSDNGDGRLTGSSFVPNFFRANTSGPMGTRAVALYLRSAGFKNFYGLGMDYAW
                     GHNSIGVFKDEVTKAGKNFIADVYSPIGTKDFSTYITKIRQSGADACYLVLQGDDNNA
                     FLAQAKQYRLGDKVQLLTEIVDLNSIHAVGDAAIGLIGGSRYTFTFPGDANAQFVAAW
                     QKEYGNVPDVFEGEQWQACQMLQAGIEKAGSIDADKLRPALETVEIDSIKGKVAMRAC
                     DHQAVQRGFMVKVGRKEGFKDPIPELIATFPADQITPACRQMTYDS"
     gene            1143..2012
                     /locus_tag="VHX39_06060"
     CDS             1143..2012
                     /locus_tag="VHX39_06060"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3990718.1"
                     /translation="MEFLAFLVTQCLNALSQAALLFFLGCGLTLIFGIMRIVNFAHGA
                     FFMLGAYVGYSSVHWTGSFWIALVIAPIIVGGFGAAFELGILRRLYGRDGHAFLMVTF
                     GLTLVMGEVIRLIWGVEALQVTPPAALSDIVFILDEPFPVYRLFLVGSGIVVALVIWQ
                     FLERTRLGLLIRATSQNAEMVYALGTDVRLVRSAVFGIGCGLAGIGGVMAAPLVTASL
                     GMAPNAVIDTFVIVIIGGMGSFLGSLIGAVLVAFVQVFGTYYFPDFALAFMYLIMVTV
                     LVVRPGGLLGKEA"
     gene            2016..2939
                     /locus_tag="VHX39_06065"
     CDS             2016..2939
                     /locus_tag="VHX39_06065"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3990719.1"
                     /translation="MRFALAAAALLALLPLGLPPYAMTLLTEALILGLFAMSLDLMVG
                     YARLISFGHAAAYGFGAYACGNFLLHTSMPLPFAVLLAGVLGGIVAIGVGWVCTQATG
                     VSFSMLTLAYAQLLYAVAFKWTPVTGASDGLAGIPRNPGPFGVSWSTHAGFYYLALAF
                     LLGAFLFCHTLVRSPFGAVLRGIRENEAKTIALGYNTRRYKIAIVAISFGLAGVAGAL
                     YAPFAGFANTELLFWLLSGQVLIMVIVGGAGTLIGPIVGAMFFLYVQQKLSSYTDSWA
                     LFFGVMFILFVLFMPEGIWGLVLSRFKPKPA"
     gene            2940..3689
                     /locus_tag="VHX39_06070"
     CDS             2940..3689
                     /locus_tag="VHX39_06070"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3990720.1"
                     /translation="MALLELDDLTKRYGGIVAVDHVTMRIEAGEVRAVIGPNGAGKTS
                     LFHLITGVVKATEGIVRFADQDVSGLPAHVRCQRGMSRTFQLTSLFPEMSARDNTKLA
                     AQARDGKRWVPFGGSGVFQTAAQRGDAALERLGLTHVADRPAGLLSHGDQRLLEVAMA
                     LAQQPRLLLLDEPTQGLSVEETAQAVEVLSSLFASGGQTVLLVEHDMEVVFRLAHKIT
                     VLHRGSVIADGDPDTVKADEGVQNAYLGGFA"
     gene            3689..>3870
                     /locus_tag="VHX39_06075"
     CDS             3689..>3870
                     /locus_tag="VHX39_06075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3990721.1"
                     /translation="MLAIKGLNTHYGASHILQGVDLEVPDGRIIALLGRNGVGKSTTL
                     RTVMGLVPASGGSVEL"
BASE COUNT          629 a         1093 c         1255 g          893 t
ORIGIN      
        1 gtggtgctgc gtcacgcgcg cggcgaggcg gcgatcaaga tcggcatgcc gctcgcactg
       61 accggcccgg ccggcgagat tgggttgcag atgcgccacg gtgccgagtt ctgggccaag
      121 gaactcaacg ccaagggcgg cctcatcggc cagcagatcg agctgcacgt cgaggacacc
      181 gccggcgatc ctgccacctg cgtgcgcaag gcgcagctcg tggtggaacg cgacaactgc
      241 cacctgctgt tcggcatggt gctgtcgtcc gaggcgctgg cggtggtccc gaagctcgcc
      301 gaatggaacg cgatcttcat gtcgtcggat aacggcgacg gaaggctgac gggctcgtcg
      361 ttcgtgccca acttcttccg cgccaatacg tcgggtccaa tggggacacg ggcggtcgcg
      421 ttgtatcttc gcagtgcagg cttcaagaat ttctacggac ttggcatgga ttacgcctgg
      481 ggacacaaca gcatcggcgt gttcaaggac gaggtgacga aggccggtaa gaatttcatc
      541 gccgacgttt attcgccgat cggcacgaag gacttttcga cctacatcac gaagatccgg
      601 cagtcgggag ctgacgcttg ttacctcgtg ctgcaaggtg acgacaataa cgcgtttctt
      661 gcgcaggcaa aacagtatcg gttgggcgac aaggttcagc tgctgacgga aattgttgac
      721 ctgaacagca ttcatgcggt gggtgatgcg gcgatcggac tgatcggcgg ctcgcgttac
      781 accttcacct ttccgggtga cgcaaatgcg cagttcgtcg cggcctggca gaaggaatac
      841 ggcaacgtgc ctgacgtgtt cgagggcgag caatggcagg cctgccaaat gctccaggcc
      901 ggcatcgaga aggctggcag tatcgatgcc gacaaactgc gtcccgccct ggaaaccgtt
      961 gagatcgaca gcatcaaggg caaggtcgca atgcgcgcct gcgatcatca ggccgtgcaa
     1021 cggggcttca tggtaaaggt cgggcgtaag gaagggttca aagatccgat cccggaactg
     1081 attgccacct tcccggctga tcagatcact ccggcctgcc gtcagatgac ctacgacagt
     1141 tgatggagtt tctggcgttc ctggtcaccc agtgtctcaa cgcgttgtcg caggctgcgc
     1201 tgttgttctt cctcggctgc ggcctgacgt tgatcttcgg catcatgcgt atcgtcaatt
     1261 tcgctcatgg cgccttcttc atgttgggtg cctatgtcgg ctattcgtcg gtgcactgga
     1321 ccggaagttt ctggatcgcc ctggtcatcg ccccaatcat tgtcggcggt tttggcgccg
     1381 ccttcgaact gggcattttg cgtcggctgt acggccggga cgggcacgcc ttcctgatgg
     1441 tgacattcgg cctgacattg gtcatggggg aggtgatccg gctgatctgg ggcgtcgagg
     1501 cattgcaggt gactccgccc gccgctctgt ccgacatcgt ctttattctc gatgaaccgt
     1561 tcccggttta ccggttgttc ctggtcggct cgggtatcgt tgttgctttg gtgatctggc
     1621 aatttctgga acgcacccga ttgggcctgc tgattcgtgc cacatcgcaa aacgccgaaa
     1681 tggtttatgc gcttggtacg gatgttcggc tggtgcgctc tgcggtgttc gggattggct
     1741 gcgggcttgc cggcatcggg ggcgtgatgg ccgcaccgct ggtcaccgcc tcgctcggca
     1801 tggcgccgaa cgcggtcatc gatacgtttg tcattgtcat catcggtggc atgggaagtt
     1861 tccttggctc gttgatcggc gcagttctcg tggctttcgt gcaggtgttc ggcacttact
     1921 atttccccga tttcgctctc gcgttcatgt atctgatcat ggtcacggtg ctggtcgtcc
     1981 ggcccggcgg tttgctcggc aaggaggcgt aggcgatgcg gtttgcactt gccgccgccg
     2041 cgctgctggc gctgctgcct cttggtctgc cgccgtacgc gatgaccttg ctgactgagg
     2101 cgctgatcct tggcttgttc gccatgagcc tcgatctgat ggttggctat gcaaggttga
     2161 tttcgtttgg tcacgcggcg gcctatgggt tcggcgctta tgcctgtggc aactttctgc
     2221 tccacaccag catgccgctg ccttttgcag tcttgctggc cggtgtgttg gggggaatcg
     2281 tcgcaattgg cgtcgggtgg gtttgcaccc aggccaccgg cgtatcgttt tcaatgctga
     2341 cgctcgccta cgcgcaattg ctgtatgctg tggccttcaa atggactccg gtcaccggcg
     2401 cgtccgacgg tcttgccggc atcccgcgca atccaggccc gttcggcgtg agctggagca
     2461 cgcatgcggg gttttattat ttggcgcttg cgttcctgct cggcgctttt ctgttttgcc
     2521 ataccctggt gcgctcgccg tttggtgccg tgttgcgcgg catccgtgag aacgaggcga
     2581 aaaccatcgc acttggctac aacacacgcc gctacaaaat cgcgattgtg gcgatatcat
     2641 ttggcctcgc cggtgtggcg ggcgcgcttt atgcaccatt cgccggcttc gccaataccg
     2701 agctgctgtt ctggttgttg tccggtcagg tgctgatcat ggtcatcgtc ggtggcgccg
     2761 gcacgctgat cggtcccatc gtcggtgcga tgttttttct ttatgtgcag cagaagttat
     2821 cttcctacac cgattcatgg gcgttgtttt tcggggtgat gttcatcctg tttgttttgt
     2881 tcatgcccga gggcatctgg ggtttggtcc tgtcgcgctt caagccaaag cccgcctgaa
     2941 tggcgctgct ggaactggac gatctgacca aacgctacgg cgggatcgtc gccgtcgatc
     3001 atgtgacgat gcggatcgag gccggcgaag tgcgtgcggt gatcggcccc aacggcgccg
     3061 gcaagaccag tctgtttcac ctgatcaccg gtgtggtgaa ggcgaccgaa ggcattgttc
     3121 ggttcgctga tcaggatgtt tccgggctgc cggcgcatgt ccgctgccaa cgcggcatgt
     3181 cacgaacctt ccagttgacg tcgctgttcc cggagatgtc ggcccgcgac aacacgaagc
     3241 tcgcggccca ggcgagagat ggcaaacggt gggtgccgtt cggcgggagc ggggtgttcc
     3301 aaacggccgc gcaacggggt gacgcggcgc tggagcggct tggcctgacc catgtcgcgg
     3361 accggcccgc agggttgctg tcgcatggcg atcagcggct gctggaagtg gccatggcgc
     3421 tggcgcaaca acccaggttg ctgctgctgg atgaaccgac gcagggtctg tccgtcgagg
     3481 aaacggcgca ggccgtcgaa gtcctgtcct cactgttcgc ctccggaggg cagactgtgc
     3541 ttctggtgga acacgatatg gaggttgtct tccgccttgc ccacaaaata accgtgctgc
     3601 atcgcgggtc ggtgatcgcg gacggagatc ccgatacggt aaaagccgat gagggcgtgc
     3661 agaatgcgta tctcggaggc ttcgcctgat gctggcgatc aagggcctca atacgcatta
     3721 cggcgcgagc catattctgc agggtgtcga tctggaagtg ccggacggcc gcatcatcgc
     3781 gctgcttggc cgcaatggtg tcggcaaaag cacgacatta cgcacagtga tgggactggt
     3841 gccggcgagc ggcggctccg tcgaactcga
//
LOCUS       DATAVD010000329         3081 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2451840, whole genome shotgun sequence.
ACCESSION   DATAVD010000329 DATAVD010000000
VERSION     DATAVD010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3081
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2451840"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2105
                     /locus_tag="VHX39_06080"
     CDS             <1..2105
                     /locus_tag="VHX39_06080"
                     /inference="COORDINATES: protein motif:HMM:NF020683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="galactose oxidase-like domain-containing
                     protein"
                     /protein_id="HEX3990722.1"
                     /translation="ASAANIGAWSDVFAMPNATIHSHLLPNGKVLFWGRRDSPDGTLN
                     DHFCTPHVWDPATRTSVPTPQPKAIDGSTVNLFCSGHTMLPDGKLLVTGGHFKDSMGI
                     EQASLYDFTANSWTPLPAMNHGRWYPSAVTLADGQAVVLSGSFATTDGKNIQNNPIPQ
                     VWDGTGWRELAAFPGDGSPTPAPIELFPCLHVIPDGRVFMSGPAARSYFLDTGGAGKW
                     TLLEGNGGIRDNMRRDYAPSVMYDVGKIIYIGGGNDQGPQQTPSAEVEAIDLTVPNPA
                     WRPIKPMHFARRQHNATLLPDGTVLVTGGTQGAGFNDLVQGSPIHAAELWDPATEAWT
                     IVAAEAVDRCYHSTAILLPDATVLSGGGGEYDIGNGTVNPAKDTHRDAQIYHPPYLAR
                     GARPEISAAPEQVAYGATFVVGTPTPQAIGKVTLLRLASTTHTNNMNQRINFLAFTVT
                     AGELRVTSPERPELCPPGHYMLFVLNRDGVPSVAKIVHITAPAAPRVMEQARPTAPAE
                     VAAAPVHAATLEDLDRNIRQAAHGTQAAIGLTSKCPYGLGACWGGAYEALTKLDGVTA
                     IRPIANAEDSTADVWLAGDTLPNVDRWAEQIAQTANGSYDFRGVEVSVTGVPVAAGTG
                     LVLTGKQLPAPLPLQPLGSAEKVQFDRAAREPRPATPEEQAAFARLTGNTGPVRVTGP
                     LVRDGDHWVLHVRALEKA"
     gene            complement(2106..>3081)
                     /locus_tag="VHX39_06085"
     CDS             complement(2106..>3081)
                     /locus_tag="VHX39_06085"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX3990723.1"
                     /translation="LRVAGILSRPVDPYRLHVLLLSNPLSPRSEMRLATSYPTAQELD
                     QALRDGELHTEYQPKTDLVTGEIVGVEALARWHSPTLGVIPPDQFVPVAEQSDLISRL
                     TFRILQDAISACRKWREIRPDCSVAVNLSPRVLADPRLLSMVESILGESSLPPGALIA
                     EVTESTLISSLPAATELLTRLSTKGVRVSIDSFGTGYTSLTSLFRIPFAELKIDRSFI
                     GVCRTDPDAWKLVRTTVALARELGMNVVAEGIETEAVRDRLRDVGCDVGQGWYFGRPM
                     QSDALLRWLAPEQTTQVEQLRELATPIEDKLASATPRQIGAKALSRVV"
BASE COUNT          582 a          983 c          954 g          562 t
ORIGIN      
        1 ccgcaagtgc tgcaaatatc ggtgcgtgga gcgacgtgtt tgcgatgccc aacgccacca
       61 tccattcgca tctgctgccg aatggcaaag tgctgttctg gggacggcgg gattcaccgg
      121 acggaacgct caacgatcac ttttgcacgc cgcacgtgtg ggacccggcg acacgcacat
      181 ccgtgccgac gccgcaaccg aaagcgatcg acggctcgac cgtcaacctg ttctgttccg
      241 gccatacgat gctgcccgac ggaaagttgc tggttaccgg cggtcatttc aaagacagca
      301 tgggcatcga gcaggcgagc ctgtacgact tcaccgccaa cagctggacg ccgctcccgg
      361 cgatgaacca cggccgctgg tatccgtccg ccgtaacgct tgccgatggc caggcggtgg
      421 tactgtctgg aagcttcgcc actaccgacg gcaagaatat tcaaaacaac ccaattcccc
      481 aggtctggga tgggaccggg tggcgggagc ttgccgcctt cccgggcgac ggatcgccaa
      541 cgcccgcgcc gatcgagttg tttccgtgcc tgcatgtcat accggatggc cgcgtgttca
      601 tgtcgggtcc tgctgcacgc agctatttcc tcgataccgg cggggccggc aaatggacct
      661 tgttggaggg caatggcggc atccgtgaca acatgcggcg cgattatgct ccgtcggtga
      721 tgtacgatgt cggcaagatc atctatatcg gtggcggcaa cgatcaggga ccgcaacaga
      781 caccgtccgc agaagtcgag gcaatcgatc tgacggtacc caacccggcg tggcggccga
      841 tcaaacccat gcatttcgct cgccgccagc acaacgcgac attattgccc gacggcaccg
      901 tgctggttac cggcggtacc cagggcgccg gctttaacga tcttgtccag ggcagtccga
      961 tccacgcggc cgagctttgg gatcccgcca ccgaagcctg gaccatcgtt gccgccgagg
     1021 cggtcgaccg ctgctatcat tccaccgcca tcctgttgcc ggatgcgacg gtgttgagcg
     1081 gcggcggcgg cgagtacgac atcggcaacg gcacggtgaa tcctgccaag gacacccatc
     1141 gtgacgcgca aatttatcac ccgccctacc tggcccgcgg tgctcgaccg gaaatcagcg
     1201 cggcgcctga gcaagtcgct tacggcgcca cttttgttgt cggtacgccg accccgcagg
     1261 cgatcggcaa ggtgaccttg ttgcggcttg cctccaccac gcacaccaac aacatgaatc
     1321 agcggatcaa tttcctcgcc ttcacagtga ccgcagggga attgcgggtc accagcccgg
     1381 agcggcccga actctgccca ccgggccact atatgctgtt cgtgctgaac cgcgacggcg
     1441 tgccgtcggt tgccaaaatt gtccatatta ccgcgccggc cgcaccgcgt gtgatggaac
     1501 aagcccgacc caccgcaccg gcagaggttg ccgccgcgcc ggtgcacgcc gccacgcttg
     1561 aagatctcga ccgcaacatt cgccaggcgg ctcacggcac ccaggcggcg atcggcctca
     1621 cgtcgaaatg tccttatggc ctcggtgcct gctggggcgg cgcgtatgag gctttgacga
     1681 aactcgacgg ggtgaccgcg atccggccga tcgccaacgc cgaggattcg acggccgatg
     1741 tctggctggc cggtgacact ttgccgaacg tcgaccgttg ggccgagcaa atcgcgcaaa
     1801 ccgccaacgg cagctacgat tttcgcggcg tcgaggtttc tgttaccggc gtgcccgtcg
     1861 ctgccggtac cgggttggtt ttgaccggga aacagttgcc ggcgccgttg ccgttacagc
     1921 ctctgggctc ggccgagaag gttcaattcg accgtgcggc acgcgagccg cgtccggcca
     1981 cgcctgaaga gcaggcagcg ttcgcccggt tgaccggcaa taccgggccg gtgcgtgtga
     2041 cgggaccgtt ggtgcgcgac ggagatcact gggtcttgca cgtccgtgcg ctcgagaagg
     2101 cgtgactaaa ccacccgtga cagcgctttg gccccaatct ggcgaggcgt cgccgaagcg
     2161 agcttatcct cgattggggt cgcaagctcc cgcagttgct caacctgcgt ggtttgctcc
     2221 ggggcaagcc aacgcagcaa tgcatcgctt tgcatcgggc gcccgaaata ccagccttga
     2281 ccgacgtcgc aaccgacgtc gcgcagccga tctctgactg cctcggtctc gataccctcg
     2341 gcgacgacgt tcatgccgag ttcgcgcgcc agtgccacgg tggtacggac cagcttccag
     2401 gcatccggat cggtgcggca gacgccaatg aacgatcggt cgatcttgag ttcggcgaac
     2461 ggtatccgaa acaacgatgt gagtgaagta taaccggtgc cgaaactatc gatcgaaacc
     2521 cgcacgcctt tggtgctgag tctggtcagc aattcggtgg ccgcgggcag gctcgatatc
     2581 aaggtgcttt ccgttacctc ggcgatcagt gcgccaggcg gcagactgct ttcgccgagg
     2641 attgactcca ccatcgacaa caaccgggga tcggccaata cccgcgggga aaggtttacg
     2701 gcaacgctgc agtccggccg tatttcccgc cacttgcggc aggctgaaat ggcatcttgc
     2761 aggatgcgaa acgtcagtcg gctgatcagg tccgattgct ctgccacagg aacgaactgg
     2821 tcgggcggga tgacgccgag cgttgggctg tgccagcggg caagcgcctc gacgccgacg
     2881 atctcgccgg tgacaaggtc ggttttcggt tgatattccg tatgaagctc gccatccctc
     2941 agggcctgat ccagttcctg ggcggtcggg taactggtgg ccaatcgcat ttccgaacgc
     3001 gggctcagag gatttgacag cagcagcaca tgcaggcggt atggatcaac cggccggctt
     3061 aaaatgcccg caacccgcag c
//
LOCUS       DATAVD010000330         6898 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2638294, whole genome shotgun sequence.
ACCESSION   DATAVD010000330 DATAVD010000000
VERSION     DATAVD010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6898
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2638294"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2357
                     /locus_tag="VHX39_06090"
     CDS             <1..2357
                     /locus_tag="VHX39_06090"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HEX3990724.1"
                     /translation="AVRLILLAFLAVAIPGTHTAFAQDTTASAPVPAMSAADAQQLIA
                     TLQDPARRAALIATLQNLQKIVPPAPPTTAQTTIASPGAAPVAPAPNNLGAQLVAHGT
                     RLADTVSASLLAAVRGVANIPDLLRWLQGIAQDPETLLAMTIVAGRLLCVLLLAFGCE
                     FLALRMTRRLYRSLAADAREQESTASTNPAALPEHEPVAVSPVQRVRLVDGWLMLLRL
                     PIIVMALTIDLLPPLAFLAIAYLLAGTPLVGSGDVRAAALAVIDAYVIVRMAGAVGRA
                     AFGAPYARLRLLPVSDATARYLMRWVRRIFLVVIFGYAVSRFAVLFGMDEDTRQGVLR
                     LISLLVHVMLIVMVIQCRASVAARLSGGGEGFFGTLRQRVASAWHIYAIIVIAAAWVI
                     YAYEIPDGMAELLHFVLWTLVVALAARVADIVLVGGLDRGFALAHERASGFVHIEARA
                     SRYHQPLRILLRVAIAAVAFVFLAQVLGFDVGYWFGEGAPGGRLANSLVTLLVTLGVA
                     IALWEAINVGMQAYLDRLTQEGAAVRAARLQTIVPLLRNSLLIVLMVLIGLTAMSELG
                     VNIGPLLAGASIFGVAIGFGSQKLVQDFITGIFLLLENAMQVGDFVTAGGLSGTVENL
                     SIRTLRLRAGDGSVHVIPFSSVSTVTNSNRGLGNASVAVTVDYQEDSEHVAGVLTGIV
                     KEMRDDKAFATGMLSDLQLWGVDRVDGATMTLAGQIVCSDSARWGVQREFNRRVKIAF
                     QKEGIRMMPVNTTVTALQRPFEIKMAPSGKATPAAYAMPDSEKG"
     gene            complement(2443..2622)
                     /locus_tag="VHX39_06095"
     CDS             complement(2443..2622)
                     /locus_tag="VHX39_06095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990725.1"
                     /translation="MRNHVPLDLLTADQLRERAREYREMAETATSDATSAGLARLADQ
                     FEALAETRQSRAAAG"
     gene            complement(2804..3388)
                     /locus_tag="VHX39_06100"
     CDS             complement(2804..3388)
                     /locus_tag="VHX39_06100"
                     /EC_number="1.-.-.-"
                     /EC_number="1.6.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEX3990726.1"
                     /translation="MHVLLIHCHPRADSFSAALRDAAVAGLTAGGHSVEQRDLYAEAF
                     DPVLSTQQRGVYFDESANALGLEDHVAALCRAEALVLVYPTWWFGMPAMLKGWFDRVW
                     VPGVAFRLGGPKALLPLLTGLRKIVVVTTYGSPWWLLWWVGWPDRRLVRRGLRPLCAA
                     GCRIQWLGLTGMDVDRPSRRARFLAKVSRQLSRW"
     gene            complement(3404..3709)
                     /gene="clpS"
                     /locus_tag="VHX39_06105"
     CDS             complement(3404..3709)
                     /gene="clpS"
                     /locus_tag="VHX39_06105"
                     /inference="COORDINATES: protein motif:HMM:NF009564.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HEX3990727.1"
                     /translation="MDEIVTTPNTKDEIKVERPRLHKVILVNDDYTPREFVVMVLKSV
                     FRMSEDQAMRVMITAHRRGTCVVAVYTKDVAESKATNATDTARSKGYPLLFTTEPEE"
     gene            3859..4899
                     /locus_tag="VHX39_06110"
     CDS             3859..4899
                     /locus_tag="VHX39_06110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative FMN-dependent luciferase-like
                     monooxygenase"
                     /protein_id="HEX3990728.1"
                     /translation="MTRSPEFQRLAFFTRLLDAAPAAERYRLAAEQIAHAERFGFDAA
                     WVAQHHFHEHEGGLPSPFVFLGHLAARTSRIRLGTGIITLPLELPVRVAEDAIVLDLI
                     SGGRLELGVGNGGNPTAFAGFGLDGERRNDLFADNLAQLRNALRGDRIPGGDTLYPQQ
                     PDLVERIWQATFSVTGGARAGLAGDGLMLSRTQPRPPENPHATLAELQEPIIDAYLAA
                     LPPGRRPRIVGSRSVFVAESRAEALQLADVGLRTAVRRFIDRGHRVPGNTLADLIRAF
                     DVHVGTPDDVIASLRADKTLARVTDLAVQVHSIDPPHPLILRSIELVAQHVAPAFGWR
                     PEQHRAEAESVA"
     gene            4896..5492
                     /locus_tag="VHX39_06115"
     CDS             4896..5492
                     /locus_tag="VHX39_06115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMD domain protein"
                     /protein_id="HEX3990729.1"
                     /translation="MSNDDVIDRLAGLAAGSPLAMIRDRKPVTRQQAQESFRALFEAG
                     EAGDVTLQERFALARFVAGLHAQEEAAAFYAAGLARTGPSEAFVAALSDEIANGRAVG
                     PYGAYPKGPLSIEDLAGPVYAVTEENRSVLGVRMSAAMAHVHLLVFHPRDASASGLQR
                     LLDAGWSNAGIVTLSQLVAFLAFQLRAAAGLRTLAASA"
     gene            5503..6096
                     /locus_tag="VHX39_06120"
     CDS             5503..6096
                     /locus_tag="VHX39_06120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkylhydroperoxidase domain protein"
                     /protein_id="HEX3990730.1"
                     /translation="MTETVITHPENHEPVAFTLALLDWLPWLEPPAEAALTERQRASL
                     VDTARSKSAYFRLLARDPAILEARTRTDKDIFFNTSSGLPRAERELAAAATSRHNGCI
                     YCASVHARHATTYSKRADDVRRLLDVGVGADLGERWNAIVAASVALAATPIAFGTAHV
                     QRLRAAGLDDPEIVDVINSAAFFNWANRLMLSLGEPA"
     gene            6172..>6898
                     /locus_tag="VHX39_06125"
     CDS             6172..>6898
                     /locus_tag="VHX39_06125"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase domain-containing protein"
                     /protein_id="HEX3990731.1"
                     /translation="MTEPAALFTRLPTDVAGLNRVVQGLLVHCELLDKYSDDPGAFGP
                     VSRATLPVQQRLAALLEMDGRPLDEVRPPTLRGVGTCRDFALMVCAFLRATGTAARVR
                     CGFAAYFADAWEDHWVCEYWNAAEARWCLSDAQLDDVQRKVFRIVFNTADVPRDVFLT
                     AGEAWLRCRARHDQPERFGQGPTRGIWFLKVNVVRDALAVNNRETSPWDRWREAPPAL
                     RVVFDDEIATLDSLARNPGQAVDL"
BASE COUNT         1152 a         2152 c         2204 g         1390 t
ORIGIN      
        1 ctgccgttcg cctgattctg ctggcttttt tggccgttgc gatccccggg acccacaccg
       61 cctttgctca ggacaccacc gcttcggcgc cggtaccggc catgagtgct gccgatgcgc
      121 agcagctcat cgccaccctt caggatccgg ctcgccgggc cgcgctgatc gcgacattgc
      181 agaatctgca gaagattgtc cctccggcgc cccccactac agcccagacc accatcgcca
      241 gcccgggggc cgcgcccgtt gctccggcgc ccaacaacct cggcgcgcaa ctggtggcgc
      301 atggcacaag gctggcggat accgtttctg ccagcctgtt ggcggccgtc agaggcgtcg
      361 ccaacatccc cgacctgttg cgttggttgc aaggcatcgc gcaggatccg gagacgcttt
      421 tggcaatgac gattgtggcc ggccggttgc tgtgcgtgct gctgttggcc tttggctgcg
      481 agtttttggc gttgcggatg acccgccggc tgtatcggtc gcttgccgcg gatgcccgcg
      541 agcaggagag tacagccagc accaatcccg cagccctgcc ggaacacgag cccgtcgcgg
      601 tctcgccggt gcaacgggtc cgcctggtgg atggctggct gatgctgctg cgactgccca
      661 tcatcgtcat ggcgctgaca atcgatttgc tgccgccgct ggccttcctg gcgattgcgt
      721 acctgctggc gggaactcct ctcgtggggt cgggcgacgt ccgagccgcc gctctcgcgg
      781 tcatcgacgc ttatgtcatc gtccgcatgg caggtgccgt cggccgcgcg gcctttggcg
      841 ctccctacgc gcggttgcgt ctgctgccgg tctccgatgc caccgcacgg tatctgatgc
      901 gctgggtgcg ccgcattttc ctcgtcgtca tcttcggtta cgcggtctcg cgatttgccg
      961 tgctgttcgg catggacgag gacacgcggc aaggcgtgct gcgcctcatc agtttgctgg
     1021 tccatgtgat gctgatcgtg atggtcatcc agtgccgcgc cagtgtcgcc gcccggctga
     1081 gcggtggcgg cgaagggttt ttcggcacac tgcggcagcg cgtcgcgagc gcctggcaca
     1141 tctacgcaat catcgtcatt gccgctgcgt gggtgatcta cgcgtacgaa attcctgacg
     1201 gcatggcgga attgctccat ttcgtgctgt ggaccctggt ggtcgcactg gccgcgcgcg
     1261 ttgctgacat tgtgctggtt ggcgggctcg atcgcggctt tgcgctggcg cacgagcgtg
     1321 cctcgggctt cgtgcatatc gaagcgcgcg ccagccgata ccaccagccg ctccgtatcc
     1381 tgctccgggt cgcgattgcc gccgtggctt tcgtgtttct ggcgcaagta ctgggctttg
     1441 acgtgggtta ttggttcgga gagggcgctc ccggcggcag gctggcgaat tccctggtga
     1501 ccctgctggt cacacttggc gtcgcgatcg cgctgtggga ggcgatcaac gtcggcatgc
     1561 aggcctatct ggaccggctg acacaggagg gcgccgcggt ccgcgcggct cggctgcaaa
     1621 ccattgtgcc gctgttgcgc aattcgctgc tgatcgtgct gatggtgttg atcgggctca
     1681 ccgcaatgag cgagcttggc gtcaacatcg ggccattgct ggcgggtgcg agcatcttcg
     1741 gcgtggcgat cgggttcggc tcgcagaaac tcgtgcagga tttcatcacc gggatttttc
     1801 tgctgctgga aaacgccatg caggtcgggg atttcgtgac ggcgggcggg ctttccggta
     1861 cggtggagaa tttgtcgatc cgcacgttgc ggttgcgggc cggcgacggc tcggtccatg
     1921 tcatcccatt cagttccgtt tcaactgtaa ccaattccaa tcgtggtctt ggcaatgcct
     1981 cggtcgcggt caccgtcgat tatcaggagg acagcgaaca tgtcgccggc gttctgaccg
     2041 ggattgtgaa ggaaatgcgg gacgacaagg cgttcgcgac cgggatgctg agcgatctgc
     2101 aactttgggg ggtcgaccgg gtcgatggtg caacgatgac gctcgcgggc cagatcgttt
     2161 gtagcgacag cgcgcgttgg ggcgttcagc gggaattcaa tcgacgggta aagattgcgt
     2221 ttcaaaagga gggcatccgg atgatgccgg tcaacaccac ggtcaccgca ttgcagcggc
     2281 cgttcgagat caagatggca ccatcaggaa aggcgacgcc ggcggcttat gccatgccgg
     2341 attccgaaaa gggataggca cgtcaggctg catcggcacc gccaagggtc gtatcgacaa
     2401 accgtcaggc ggcatgattg cctgacccgc tccgttgttg cgctatcctg cggccgcgcg
     2461 cgactgcctg gtctctgcca acgcttcgaa ttggtcggcg agacgggcca ggcccgcaga
     2521 cgtcgcatcc gatgtcgcgg tttccgccat ttcccggtat tcgcgcgccc gttcgcgaag
     2581 ttgatctgcg gtcaggagat cgagcggcac atgattgcgc atcgagttta ccccgtgatc
     2641 ctgttaaccc ggacctgtca gcacacatgt cccaggctgt tggccaccgt caatcccggt
     2701 gactgagatc aattctggtt attcacagaa aaccgctttt atccacaact ttaaagttct
     2761 gcaaagtgca gcggcaaata tcaggcgccc aaaatccgtt cggttaccac cgggaaagct
     2821 gccggctgac cttggccagg aaccgtgccc gtcgcgacgg ccggtccaca tccatcccgg
     2881 tcagacccaa ccattggatg cgacatccgg cagcgcacag cgggcgcagg cctcgcctga
     2941 ccaggcgccg atccggccaa cccacccacc acagcagcca ccacggcgag ccgtacgttg
     3001 tcacgacgac gatcttgcga aggccggtca gcaacggcaa cagcgccttc ggtccaccca
     3061 gccggaacgc caccccgggg acccataccc ggtcaaacca tcctttcaac atcgccggca
     3121 tcccgaacca ccaggttggg tagaccaaca ccaaagcctc ggcccggcac agcgccgcaa
     3181 cgtgatcttc cagaccgagc gcattggcag attcgtcaaa atagacgcca cgttgctgcg
     3241 tcgacagcac cggatcgaac gcctcggcgt aaaggtcgcg ctgttcgacg gaatgcccgc
     3301 cggcggtcag gcctgccacc gccgcatcac gcaatgcggc actgaaactg tccgctcgag
     3361 gatgacaatg gatcagcagc acgtgcatcg ccgatgccgc gtcctattcc tccggttccg
     3421 tcgtgaacaa caacggatag cctttgctgc gagcggtgtc ggtggcgttg gttgccttgg
     3481 attccgccac gtcttttgta tagacggcga cgacacaggt gccacggcgg tgcgccgtga
     3541 tcatcactcg catggcctga tcctcgctca tgcgaaacac tgacttcagc accatgacga
     3601 caaactcgcg cggtgtgtaa tcgtcattga ccagaatgac cttatgcaga cgaggacgtt
     3661 caaccttgat ctcgtctttg gtgttgggcg tggtgacgat ctcatccatc ggtgggaccc
     3721 tcctgacacg ggcaacgcgc tgcgacggca attttgcagc gccgggtgga ttaagcacac
     3781 atggaccggg tttgcgaagc cgaccccatt gaagccgccc cattgaagcc tgggtcaggg
     3841 gggacatagg atcggccgat gacccgttca cccgagttcc agcgtctggc ttttttcacc
     3901 cgcctgctcg acgctgcacc tgccgcggaa cgctatcgcc tggccgcgga acagatcgct
     3961 catgctgagc gcttcgggtt cgatgccgcg tgggttgcgc aacaccattt tcatgaacat
     4021 gagggcgggc tgccgtcacc cttcgtgttt ctcggtcatc ttgcggcgcg gacctcgcgc
     4081 attcgtctcg gtaccggaat aatcacgctc ccgctggagc tgccggtgcg cgtggcggaa
     4141 gacgccattg tgctggacct gatcagcggc ggccggctgg aacttggcgt cggcaatggc
     4201 ggcaatccga cggcgttcgc cggatttggc ctcgacggtg aacgccgcaa cgatctcttc
     4261 gccgacaatc tcgcacaatt gcgcaacgca ctaaggggcg accggattcc gggcggcgac
     4321 acgctgtatc cacaacagcc cgatctggtc gaacgaattt ggcaggcgac gttttcggtg
     4381 accggcgggg cacgggccgg actggccggt gatgggttga tgctgtcacg cacccagccg
     4441 cgtcccccgg aaaatccgca cgccacgctc gccgaattgc aggagccgat catcgatgcc
     4501 tatctggctg cgctgccgcc gggacggagg ccgcgcatcg ttgggtctcg cagcgtgttt
     4561 gtcgcggaaa gccgcgccga ggcgttgcag ctggccgatg tcggcttgcg caccgcagtg
     4621 cggcgtttca tcgatcgcgg ccatcgcgtt cccggcaata cgctcgccga tctgatccgc
     4681 gcgtttgacg tgcatgtcgg cacgccggat gacgtgatcg cctcgttgcg agccgacaag
     4741 acgctggcgc gggtcaccga tctggctgtg caggtgcatt cgattgaccc gccgcatccg
     4801 ctgatcctac ggtcgatcga actggtggcg cagcatgtgg cgccggcctt tggctggcgt
     4861 ccggaacagc atcgcgccga ggcggagagt gttgcatgag taacgatgat gtcatcgacc
     4921 ggttggccgg cctggcggct ggttcgccat tggcaatgat ccgcgaccgc aaaccggtca
     4981 cgcgtcagca agcccaggag agctttcggg cgctgtttga agcgggtgaa gcgggtgatg
     5041 tgacgctcca ggaacgtttc gctctggcga ggtttgtcgc cggcctgcat gcgcaggagg
     5101 aggctgccgc gttctatgcc gccggtctgg cgcgcaccgg cccatctgaa gcgtttgtcg
     5161 cggctttatc ggacgaaatc gccaacggcc gcgcggttgg accgtacggc gcatatccca
     5221 aagggccgct gagtattgag gacctggccg gcccggtgta cgctgtgacg gaggagaatc
     5281 gttccgtgct tggcgttcgg atgtcggcgg caatggctca cgtgcatctg ctggtgtttc
     5341 atccgcggga tgcctcggcg tccgggctgc agcgtttgct cgatgcaggc tggtcgaacg
     5401 ccggcattgt cacgttatcg caacttgtgg cgttcttggc gtttcagctt cgcgccgccg
     5461 ccggactgcg aaccctggcc gccagcgcgt gaggagtgtg ccatgaccga gaccgtcatt
     5521 acgcatccgg aaaatcacga accggtggcg ttcactctgg cactgctgga ttggttgccg
     5581 tggctggaac ctccggccga agccgccctg accgagcggc agcgcgccag cctggtcgac
     5641 accgctcgat ccaaatcggc gtatttccgg ttgctggcgc gcgatccggc tattctggag
     5701 gcgcgcactc gcaccgataa agacatcttt ttcaacacat cgtccgggct gccgcgcgcc
     5761 gaacgggaac tggccgcagc ggcgacctcg cgtcacaacg gttgcatcta ttgcgcctcg
     5821 gttcatgccc gtcacgccac cacgtattcg aaacgagccg acgatgtgcg gcggttgctg
     5881 gatgtcggag tgggtgccga tctgggcgag cgatggaatg cgatcgttgc cgcgtcggtg
     5941 gcactggcgg caacgccgat tgcgttcggc acggcgcatg tgcaacgact gcgtgcagca
     6001 ggactggacg atcccgaaat cgtcgacgtc ataaactctg ccgccttctt caactgggct
     6061 aaccgcctga tgctgtctct gggtgagcca gcgtagtgtc ccggtacgag cgtggtccca
     6121 actgaaagaa agccgacgca gccgccgtcc cgctggctcg cccattcacc gatgacagag
     6181 ccggccgcat tgttcactcg gctgccgacc gacgtggctg gtcttaatcg ggtggtgcaa
     6241 ggccttctcg tgcactgcga gttgctcgac aagtacagcg acgaccccgg cgcttttggc
     6301 ccggtcagtc gcgccacatt gccggtgcag cagcgccttg cagccctgct cgagatggat
     6361 gggcggccgc tcgatgaagt tcgcccaccg acgctgcgag gggttggcac ctgccgcgac
     6421 tttgccctga tggtatgcgc attcctgcgc gcaactggta ccgctgcccg cgtgcgttgt
     6481 ggcttcgctg cgtatttcgc ggacgcatgg gaggaccatt gggtttgcga atactggaac
     6541 gcagccgaag cacgttggtg cctgtccgat gcacagctcg atgacgtgca aagaaaggtt
     6601 ttccggattg tgttcaacac agcagatgtg ccccgagatg tctttctcac cgcgggtgaa
     6661 gcgtggctac gatgtcgcgc ccgtcatgat cagccggagc ggtttggcca aggccccacg
     6721 cgagggattt ggtttctgaa agtgaacgtt gtccgggacg cgctcgcggt caacaatcgg
     6781 gaaacctctc cctgggatcg atggcgcgaa gcaccgcccg cgttgcgcgt ggtatttgac
     6841 gacgaaatcg cgacacttga ctcgctggca cgcaatcccg ggcaggcggt tgacctta
//
LOCUS       DATAVD010000331         1703 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3008103, whole genome shotgun sequence.
ACCESSION   DATAVD010000331 DATAVD010000000
VERSION     DATAVD010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3008103"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..226
                     /locus_tag="VHX39_06130"
     CDS             <1..226
                     /locus_tag="VHX39_06130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990732.1"
                     /translation="EAAEPTTFQLLIEAPGDASFKMSSEGASTSHSRGTEVSGGFLAS
                     LKELAVAELHARRAVVLKELGVLGVDTAEI"
     gene            403..690
                     /gene="gatC"
                     /locus_tag="VHX39_06135"
     CDS             403..690
                     /gene="gatC"
                     /locus_tag="VHX39_06135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEX3990733.1"
                     /translation="MALDPATVRRIATLARIRMEDAEVATLVGELNTIFGWIEQLNEV
                     DISGVDPLTGAAHMALKMREDVVTDGGYPDAILFNAPERIGDFFAVPKVVE"
     gene            690..>1703
                     /locus_tag="VHX39_06140"
     CDS             690..>1703
                     /locus_tag="VHX39_06140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX3990734.1"
                     /translation="MSAATELTDLTIVQGRDGLRAGAFTAVDLTMAHLHAIEALNPRL
                     NAYLSVGHAQSVELARAADVALAEGDTRPLLGIPLAIKDLFCTTGVRTTAGSKILMPF
                     VPPYESTVTANLLRDGAVFLGKTNMDEFAMGSSNMTSHYGPVENPWKRRQDPTAVLVP
                     GGSSGGSAAAVAARLAMGGTGTDTGGSIRQPASFCGLVGVKPTYGRCSRWGVVAFASS
                     LDHPGPFARTVRDAAILLGSMAGHDAKDSTSADVPVPDFEAACDRPVKGLRIGVPREY
                     RSDGMPGEIETLWQQGVAWLREAGAEIVDVSLPHTKYGLATYYIIAPAEASSNLARYD
                     GVRF"
BASE COUNT          295 a          525 c          572 g          311 t
ORIGIN      
        1 ggaagccgct gaacccacca cctttcagtt gctcattgag gcgccgggcg acgccagctt
       61 caagatgtcc tccgaggggg cgagtacgtc ccattccagg ggcaccgaag tatctggagg
      121 tttccttgcc agcctcaagg aactcgcagt ggccgaattg cacgcgcggc gagcggtcgt
      181 gctgaaggaa ctgggagtgc tcggcgtcga taccgccgaa atttgagcca ggttccgggt
      241 ccacgcgcag gccgaagggc gtcggtgctc ttcgcgtcgt aaccattgtc gaggcggtcg
      301 gatccagctg ggaaaccacc gcagtaccct cctgtcattg aacgacaagg cacccatggt
      361 tatgttcctc gcctcaccgg caaccgagga caccaagacc ccatggcgct cgatcccgcc
      421 accgttcgcc gtatcgccac gctcgcccgc atccggatgg aggatgccga ggtggcaacg
      481 ctcgtgggcg aactcaacac catcttcggc tggatcgagc aactgaatga ggtggacatc
      541 tccggcgtcg atccgctgac cggggccgcc cacatggcgc tgaagatgcg tgaggacgtg
      601 gtcaccgacg ggggttatcc cgatgccatt ctgttcaacg cgcccgagcg gattggcgat
      661 ttcttcgccg tgcccaaggt cgtcgagtaa tgtccgccgc cactgaactc acggacctga
      721 cgatcgttca gggacgcgac ggtctgcggg ccggggcgtt taccgcagtc gacctgacca
      781 tggcgcattt gcacgcgatc gaggcgctga acccaaggct caacgcgtat ctgtcggtcg
      841 gtcacgccca gtctgtggag ctggcgaggg cggcggatgt tgcactggcg gagggcgata
      901 cgaggccgct tctgggcatc ccgctggcga tcaaggacct gttctgcacc acgggagtac
      961 ggacgacggc gggcagcaaa atcctgatgc cgttcgtgcc gccttacgag tcgaccgtca
     1021 ccgccaacct gttgcgtgac ggggcggtgt ttctcggcaa gaccaatatg gacgagtttg
     1081 ccatgggctc gtccaacatg acctcccact acggcccggt ggagaacccg tggaagcggc
     1141 gtcaggaccc caccgcagtg ctggtgccag gcggatcgtc gggcggttcg gcggcagcgg
     1201 tggcggctcg gctggcgatg ggcgggacgg ggaccgatac cggcggctcg attcggcagc
     1261 cggcgtcgtt ttgtggcctg gtgggggtga aaccgactta cggccgttgc tcgcgttggg
     1321 gcgtggtcgc gttcgcatcg tcgctcgatc atccgggacc gttcgcgcgg acggtgcggg
     1381 atgctgccat attactcggc tcgatggcgg ggcacgatgc gaaggattcg accagcgccg
     1441 atgtcccggt gccggatttc gaagccgcct gcgatcggcc ggtcaaggga ctgcggatcg
     1501 gcgtgccgcg agaatatcgc tccgacggaa tgcccggtga aatcgagacg ctgtggcaac
     1561 aaggtgtcgc ctggctgcgc gaggcgggcg ccgagatcgt cgacgtgtcg ttgccacaca
     1621 ccaaatacgg cctggccacg tattacatca ttgctcctgc cgaggcatcg tcaaatctcg
     1681 cccgttatga cggcgtccgc ttc
//
LOCUS       DATAVD010000332         2489 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1893584, whole genome shotgun sequence.
ACCESSION   DATAVD010000332 DATAVD010000000
VERSION     DATAVD010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2489
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1893584"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..752
                     /locus_tag="VHX39_06145"
     CDS             <1..752
                     /locus_tag="VHX39_06145"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX3990735.1"
                     /translation="RQPGLARSPDPEVVIKKLTADAVVYEVRFWYFPDRLSPAIAAGT
                     VLKALHNVLWLNEVPLPVTQIEMTEPPNLAFTLGDREMRDALKEADLFENVLNAEQFE
                     VLALHSRTLELARSAVLMKQGDPPSSMFIIMEGAASVSVTGKDGEVNEVAISATGDVA
                     GEMSLMTGAHRNATVSALSRMRVLEIRKEAIEALLKNSPELVERFSRILAKRQHELDE
                     LANRPSKREVVETDILTRMKNFFARALSDDF"
     gene            complement(756..1136)
                     /locus_tag="VHX39_06150"
     CDS             complement(756..1136)
                     /locus_tag="VHX39_06150"
                     /inference="COORDINATES: protein motif:HMM:NF023178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3307 domain-containing protein"
                     /protein_id="HEX3990736.1"
                     /translation="MGLSLVLWALFAFQLKHFLCDFVLQTKFQVDKKKVYGHVGGLVH
                     AGLHAIMTVPIVIVMGASATIVVLLFLGELILHYHVDWLKGQIDIWSGWTEKDHTYWV
                     VFGADQLVHQITYVGVVAFLAGAL"
     gene            complement(1290..1364)
                     /locus_tag="VHX39_06155"
     tRNA            complement(1290..1364)
                     /locus_tag="VHX39_06155"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1330..1332),aa:Gln,seq:ttg)
     gene            complement(1440..2063)
                     /locus_tag="VHX39_06160"
     CDS             complement(1440..2063)
                     /locus_tag="VHX39_06160"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX3990737.1"
                     /translation="MILVGQYDSPFTRRIAISLMVLGIPFSRDTRSVFGDFDSMFAIN
                     PMGRIPALVLDDGQVLIESSAILDWIDRSVGPARALLPAKGPERTRALQRVALATGGV
                     EKIGAAAYERLIRPEAYRWPEWIARCRRQGEGALKALAREDWPADAPFDQPQISTGCL
                     LSYVRMADPELMPPGRYPSLDALAARCDARPEFVATAVTAYAVPRGE"
     gene            2217..2293
                     /locus_tag="VHX39_06165"
     tRNA            2217..2293
                     /locus_tag="VHX39_06165"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2251..2253,aa:Pro,seq:cgg)
BASE COUNT          503 a          757 c          785 g          444 t
ORIGIN      
        1 tgcgccagcc cggtctggcg cgatcgcccg atccggaagt cgtgatcaag aagctgacgg
       61 cggatgcggt cgtctatgaa gtgcgcttct ggtatttccc cgatcgcctc tcgccggcga
      121 tcgccgccgg cactgtgctc aaggcgctgc acaatgtgct ctggctcaac gaagtgccgc
      181 ttcccgtgac gcagatcgaa atgaccgagc caccgaacct cgcgttcacg ctcggcgatc
      241 gggagatgcg cgacgcgctg aaggaggccg acctgttcga gaacgtgctg aacgccgagc
      301 agttcgaagt gctggcgtta cactcaagga cgctggagct ggcgcgcagt gcggtgttga
      361 tgaagcaagg cgatccgccg tcttcgatgt tcatcatcat ggaaggcgcc gccagcgtct
      421 cggtgacggg caaggacggg gaggtcaatg aggtcgcaat ctccgccacc ggcgatgtgg
      481 cgggcgagat gtcgctgatg accggtgccc accgcaacgc aaccgtttcg gcgctctcgc
      541 gcatgcgtgt gctggaaatc cggaaagaag cgatcgaggc gctgctcaaa aattcgcccg
      601 agctcgtgga acgcttcagt cgcatcctgg ccaagcgtca gcacgagctc gacgaactcg
      661 ccaaccggcc gagcaagcgc gaagtggtgg aaacggacat cctgacccgg atgaagaact
      721 tcttcgcccg cgcgctcagc gacgatttct aaggatcaga gcgcgccggc gagaaacgcc
      781 acgacgccga cataggtgat ctggtgcact agttgatcgg cgccgaacac gacccagtag
      841 gtgtgatcct tttcggtcca gccgctccag atgtcgatct gacctttgag ccagtcgacg
      901 tggtagtgca ggatcaattc gcccaggaac agcagcacga cgatcgtggc ggatgcgccc
      961 atcacaatga cgatcggtac ggtcatgatc gcatgcaggc cggcgtgcac caggccaccg
     1021 acgtgcccgt agactttctt cttgtcgacc tggaatttgg tctgcagcac gaaatcgcac
     1081 aggaaatgct tcagctggaa cgcgaacagc gcccacagca ccaagctcag acccattacc
     1141 gtgtccttcg ttcccgccgg gtttccccgc cggtacgcca tgccccgagc cgatcatacc
     1201 ggcggcggaa gcccgcgaaa gcgcgcagcc gttcgcagtg tgatcggttg agtgacattt
     1261 ttacaaaatc cgcgttccga aaacgttact ggctggggcg ggagggttcg aacctccgaa
     1321 tgccggaatc aaaatccggt gccttaccac ttggcgacgc cccaagattt tgcggaagga
     1381 cacggcaaat tcgtggaggc gcggaccata cccacggccc gcggaattgc aaatcggtcc
     1441 tattcgccgc gcgggacggc gtaagcggtt acggctgttg cgacaaattc cggccgtgcg
     1501 tcgcatcgcg ccgcaagcgc gtccagcgat ggataacgcc ccggcggcat cagctccgga
     1561 tcggccatcc ggacgtaaga aaggagacag ccggtggaaa tctgaggctg atcgaacggc
     1621 gcgtctgccg gccagtcttc gcgcgccagc gctttgagtg caccttcacc ctgcctgcgg
     1681 cagcgcgcga tccactctgg ccagcgatag gcctccggac ggatcaggcg ctcataggcc
     1741 gcagcgccga tcttctcgac gccaccggtg gcaagcgcga cgcgctgcag ggctcgggtg
     1801 cgctccggcc ctttggcggg cagcagcgcg cgtgcggggc cgacgctgcg gtcgatccag
     1861 tccaggatgg cggaggactc gatcagcacc tggccgtcgt ccagcaccag cgccggaatc
     1921 cggcccatcg gattgatggc gaacatgctg tcgaaatccc cgaacacgga ccgggtgtcg
     1981 cgggaaaacg ggattccgag caccattagc gagatggcga tgcggcgggt gaagggcgaa
     2041 tcgtactggc cgaccaggat catgcggcga tcctgacggc cccgcagaac ctgttcaacg
     2101 gtggttgcgg ggtagggggg ccatcgttat aagggcgcct cccgcgagca cgttttggcc
     2161 cgaaaccggc caaaattggc tttgccctca aggcgaaacg gtcttgggga agagttcgga
     2221 gagtagctca gcctggtaga gcactacgtt cgggacgtag gggccggagg ttcgaatcct
     2281 ctctctccga ccatttttcc catacctgca accagttaga ggttcgacca aggcccgaca
     2341 ggggctttgg ggcggtccaa aggaccgatc cgaggcgctt ggcgctgagg acgaaaacag
     2401 gctcaggcct gttttcgcca atcctttctc tccgacaatt ttattaataa aatcagtgta
     2461 ttacaaagac tgcccggcgt cttttacgg
//
LOCUS       DATAVD010000333         5810 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2452308, whole genome shotgun sequence.
ACCESSION   DATAVD010000333 DATAVD010000000
VERSION     DATAVD010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5810
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2452308"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            365..940
                     /locus_tag="VHX39_06170"
     CDS             365..940
                     /locus_tag="VHX39_06170"
                     /inference="COORDINATES: protein motif:HMM:TIGR00413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEX3990738.1"
                     /translation="MIKRRAALVAWLICGVVCAALAGPLPAQAPGAKREAEMLDKLPP
                     IRASRPGHIDHSGRKEKGRASYYARRFDHRKMADGRRLNPNMNEAASKTLPFGSVVKV
                     TNLENGRTAMVQIEDRGPYVRGRVVDLARRPARQLGIGRQGTAPVVVKPITLPRQDGS
                     VVLGAGAAEASPQEVRRAVQVTKELIAQKAA"
     gene            complement(953..1822)
                     /locus_tag="VHX39_06175"
     CDS             complement(953..1822)
                     /locus_tag="VHX39_06175"
                     /EC_number="2.4.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017061 - S-methyl-5-thioadenosine
                     phosphorylase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5'-thioadenosine phosphorylase"
                     /protein_id="HEX3990739.1"
                     /translation="MIQPVIGIIGGSGLYDIDGLEDKAWRKVGTPWGDPSDELLFGRL
                     AGVQCVFLPRHGRGHPTSPTHLNYRANIDALKRSGVTDVLSLSAVGSLKAELPPGHFV
                     VVDQFIDRSFAREKSFFGDGVVAHVSMAHPVCGRLGGALFGAASSLSLPVTNGGTYLV
                     MEGPQFSTKAESELYRSWGCSVIGMTNMPEAKLAREAELCYATMAMVTDFDCWHPDHD
                     HVTVEAVVRILLGNAEKARDLVRTIVPDIGRKRALCPCGCDRALDNAVITAPDRRDTA
                     LIAKLDSVAGRVL"
     gene            complement(1827..2621)
                     /locus_tag="VHX39_06180"
     CDS             complement(1827..2621)
                     /locus_tag="VHX39_06180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004271673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HEX3990740.1"
                     /translation="MRPLRSLLAGVFAPALLVPVLLAMSFLATPAVAQEEGPLPHEYW
                     SFENLFGTFDLAAAQRGFQVYANVCSNCHSMQYLHYRDLVGIGLTEDQIKGIAAGITV
                     PSGLDDQGNPKDGPATPASQFKSPFPNEAAARAANNGAAPPDLSLIVNAREGGPNYVY
                     GILTGFAQAPAGFKVGEGLYYNKMFPGHQIHMPQPLQDGTVTYTDGTNSDLDQEAHDV
                     VTFLSWAANPELVERKQIGVRVVLFLVFMTGITYAVKRKLWSDVHH"
     gene            complement(2621..3895)
                     /locus_tag="VHX39_06185"
     CDS             complement(2621..3895)
                     /locus_tag="VHX39_06185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6"
                     /protein_id="HEX3990741.1"
                     /translation="MAGLNKSDFANPVINWIDTRLPIFTMMQKEYGVFPTPKNFNYLW
                     NFGALAMVNLLIMIVTGIFLAMNYQPNTELAFGSVQHIMRDVNYGWLIRYVHQNGASM
                     FFIVTYIHIFRGLYYGSYKAPRELLWMLGVVILLLMMATAFMGYVLPWGQMSYWGATV
                     ITNLFSAFPVVGPKIVTLLWGGFSVDNPTLNRFFALHYLLPFVLVGVIFLHVAALHIT
                     GSNNPLGIDVKSPQDTLPFHPYYTVKDSVGVCAFLAIFAVFVFFFPNVLGDPNNFIPA
                     NPLQTPADIVPEWYFLPYYAILRSVPDKLLGVCMMFGSLLMLFVLPWLDTSRVRSARF
                     RPVFRWLIWVWVAAVIALGVCGAHKPIGIWVILSRVCTIYYYLHFLVILPILGKLERP
                     LPLPESISQPVLGGRGGGPLPGGAAAKPMEKA"
     gene            complement(3945..4505)
                     /gene="petA"
                     /locus_tag="VHX39_06190"
     CDS             complement(3945..4505)
                     /gene="petA"
                     /locus_tag="VHX39_06190"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEX3990742.1"
                     /translation="MADSAAAIHHAPSGDVSKRDFLQLITAAGAVVGAGAIAWPLVDS
                     MNPSKDVLALSAIDVNLAPIVEGQGIVVSWQGKPVFVRHRTAVEIKEAQAVKLADLIE
                     PETDAARVKSGHDQWIVLIGICTHLGCIPLGNKPSDPRGEWGGWFCPCHGSQYDTSGR
                     VRHGPAPLNLWVPPYAFESDSKIKVG"
     gene            4722..5615
                     /gene="hemF"
                     /locus_tag="VHX39_06195"
     CDS             4722..5615
                     /gene="hemF"
                     /locus_tag="VHX39_06195"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013641122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HEX3990743.1"
                     /translation="MIENPPTVAHEPLKPAAKAWFERLRDRICAAFEAIEDAHEGPLS
                     DRPPGRFERIAWHRPTEDDQDGGGGVISLMKGRVFEKVGVNVSTVWGEFSPDFRAQIP
                     GAAEDPRFWASGISLVAHMQSPLVPAAHFNTRMLITTKGWFGGGGDLTPMRLETEPAV
                     IDAADFHAAFRTACDRHDPAYYGTFKAWCDRYFYLPHRQEPRGAGGIFFDHHATGDVE
                     ADFAFTRDVGEAFLDVYPRIIRRRMGQSWTPAERDHQLVRRGRYVEFNLIHDRGTLFG
                     LKTGGNVEAILMSLPPEVRWP"
     gene            complement(5624..>5810)
                     /locus_tag="VHX39_06200"
     CDS             complement(5624..>5810)
                     /locus_tag="VHX39_06200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990744.1"
                     /translation="DSVLGVLCVLNVRAGNRPDAAPDDLWIRRWEGWVLGQTAMPREG
                     HGFALDPQRAGGPLIPL"
BASE COUNT         1183 a         1898 c         1780 g          949 t
ORIGIN      
        1 cgcttcacct tttgaaacca cggctgtgcg cggtccaatt gcacggctcg gatgatcacc
       61 atcagcatga tcaccgaact gaacataatc ccgaacaggt cgagcatcag tcactcccgg
      121 tcgtagcgca tgatcgcccg aggcccaagg ccagaaagca tgaatcatgc gagaaaacaa
      181 acacttacag tgcaagatcg ggtcaacccg caccaatcgc attctagtga tcgtagcgtg
      241 gaaattccac actgctatac aggctcgcct atccgggagt cacgaattga tccgccgcgc
      301 ccggccgtgc gcggaacttt cgtaccgaaa cacgtcttta tgccgcgaca tcagaggaca
      361 aaggatgatc aaacgaaggg ccgcgcttgt tgcgtggttg atttgcggtg tggtctgcgc
      421 ggccctcgcg ggaccgcttc cggcgcaggc tccgggtgcg aaacgggaag cggaaatgtt
      481 ggacaagttg ccgccaatcc gtgccagccg gccaggacac atcgaccatt ccggccgcaa
      541 ggagaaaggt agggcctcct attacgccag gcgcttcgat catcgcaaaa tggcagatgg
      601 acgccggctg aacccgaaca tgaatgaggc ggcaagcaag accctgccct tcggcagcgt
      661 cgtcaaggtc acgaatctgg aaaacggccg gaccgcgatg gtgcagatcg aggatcgggg
      721 accttacgtg cgtggtcgcg tggtcgatct tgcccggcgc cccgccaggc agcttggcat
      781 cggtcgccag ggcaccgccc ccgtcgtggt caagccgatc acgttgcctc ggcaggatgg
      841 cagcgtggtc ctgggcgccg gcgcggcgga ggcgagtccg caggaagtgc gacgggccgt
      901 ccaggtcacc aaggagctga tcgcgcagaa ggccgcctga gggacagcgc cgctacagca
      961 cccggccggc aactgagtcc agcttggcga tcagcgccgt gtcgcgccgg tcgggggccg
     1021 tgatcaccgc attgtccagc gcccgatcgc agccacacgg acaaagtgcc cgcttccggc
     1081 cgatgtcagg cacgatggtt ctgacaaggt cccgcgcctt ctcggcattg cccagcagga
     1141 tgcgaaccac ggcctcaacc gtcacgtgat catggtccgg atgccagcag tcgaaatccg
     1201 tcaccatcgc catcgtcgcg tagcaaagtt cagcctcccg ggcgagcttg gcctccggca
     1261 tgttggtcat gccgatgacg ctgcagcccc aggaccgata cagttcgctc tccgccttgg
     1321 tggagaattg cggcccctcc atcaccaggt aggtgccgcc gttggtcacc ggcagcgata
     1381 gcgacgacgc cgcgccgaac agcgcgccgc caagccggcc gcaaaccgga tgcgccatcg
     1441 agacgtgggc gacgacaccg tcgccgaaga agcttttctc ccgcgcgaag ctgcgatcga
     1501 tgaactggtc gaccacgacg aagtggccgg gcggcagttc cgctttcagg ctgcccaccg
     1561 ccgacaagga cagcacatcg gtcacgccgg agcgcttcag cgcgtcgata ttcgcccggt
     1621 agttcagatg cgtcggagac gtcggatgtc cgcgcccatg ccgaggcagg aacacgcatt
     1681 gaacacccgc cagccgcccg aacagcaact catccgacgg atcgccccaa ggggttccga
     1741 ccttacgcca ggctttatcc tccagcccgt cgatatcgta caggccggag ccgccgataa
     1801 tgccgataac gggctggatc atggtgtcag tgatgaacgt cggaccaaag cttgcgcttc
     1861 acggcatacg tgatgccggt catgaacacc aggaacagga ccacgcgaac accaatctgc
     1921 ttccgctcca ccagttccgg atttgccgcc caggacagga acgtgaccac gtcgtgtgct
     1981 tcctgatcca ggtcgctgtt ggtcccgtcg gtatacgtca cggtgccatc ctgcagcggt
     2041 tgcggcatgt ggatctgatg cccagggaac atcttgttgt agtacaatcc ttccccgacc
     2101 ttgaacccgg ccggcgcctg cgcgaaaccg gtcagaatgc cgtagacgta gttgggaccg
     2161 ccctcccgag cattgacgat cagcgacagg tcgggcggtg cggcaccgtt attggcggcg
     2221 cgagccgccg cctcgttcgg gaacggcgac ttgaactggc tcgccggcgt ggccggtccg
     2281 tccttcgggt tgccctggtc gtccagcccg gacggcaccg tgattccggc ggcgatcccc
     2341 ttgatctggt cctcggtcag gccgatgcca accaggtcac ggtaatgcag gtactgcatc
     2401 gagtggcagt tcgaacacac gttggcgtag acctggaagc cgcgttgcgc ggcggcgaga
     2461 tcgaacgtcc cgaacagatt ctcgaagctc cagtactcat gcggcaacgg gccttcttcc
     2521 tgcgctacag ccggcgtagc gagaaacgac atcgcaagaa ggaccgggac gagaagggct
     2581 ggggcgaaaa ccccggcaag aagggaacgc agcgggcgca tcacgctttc tccatcggct
     2641 tggccgcggc gccgccgggc agtggtccac cgcctcgtcc gcccagaaca ggctgactga
     2701 tgctctcggg cagcggcagc ggccgctcca acttgccgag gatcggcaga atcaccagga
     2761 aatgcaggta gtagtagatg gtgcagaccc ggctcaggat gacccagatg cctatcggct
     2821 tatgcgcccc gcacacgccc agcgcgatca ccgcggcaac ccagacccag atcagccagc
     2881 ggaacaccgg gcggaaccgc gcgctgcgca cccgggacgt gtccagccac ggcaacacga
     2941 acagcatcag cagggagccg aacatcatgc acacgcccag cagcttgtcc ggcaccgatc
     3001 gcaggatggc gtagtacggc aggaagtacc actccggcac gatgtcggcg ggtgtctgca
     3061 gcggattggc agggatgaag ttgttcggat cgcccaggac gttcgggaag aagaacacga
     3121 acacggcgaa tatcgccagg aacgcgcaga cgccgacgct atccttgacc gtgtagtacg
     3181 gatggaacgg cagggtgtcc tgcggcgact tcacgtcgat gcccagcgga ttgttcgaac
     3241 cggtgatgtg caacgccgcg acatgcagga agatcacgcc gaccagcacg aacggcagca
     3301 ggtaatgcag cgcgaagaac cggttcagcg tggggttgtc gacgctgaaa ccaccccaca
     3361 gcagggtgac gatcttcggt cccaccaccg ggaaggccga gaacaggttg gtgatcaccg
     3421 tcgcgcccca gtaggacatc tggccccacg gcagcacgta gcccatgaac gcggtcgcca
     3481 tcatcagcaa caggatgacc acgcccagca tccacagcaa ctcacgcggt gccttgtagg
     3541 acccgtagta caggccgcgg aaaatgtgga tgtaggtgac gatgaagaac atcgacgcgc
     3601 cgttctggtg aacatagcgg atcagccagc catagttcac gtcgcgcatg atgtgctgga
     3661 ccgaaccgaa cgccagctcg gtattcggct gatagttcat cgccaggaag atcccggtga
     3721 cgatcatgat caggaggttc accatcgcca acgcgccgaa attccacagg tagttgaaat
     3781 tcttcggcgt cgggaacacc ccgtactctt tctgcatcat cgtgaagatg ggcagacgcg
     3841 tgtcgatcca gttgattacc ggattggcga aatcgctctt gttaaggccg gccatggttg
     3901 gttcccactc gggttcaggg ggcacgggtc aaagactgaa cggatcagcc gaccttgatc
     3961 ttgctatcgg attcgaatgc gtagggcggt acccaaagat tcaatggcgc cggcccgtgg
     4021 cgcacccgcc cggacgtatc gtattggctg ccatggcagg ggcagaacca gccgccccac
     4081 tcgccgcgcg gatcggacgg cttgttgccc agcggaatgc agcccaaatg ggtgcagata
     4141 ccaatcagga cgatccactg gtcgtgcccc gacttcaccc tggccgcgtc ggtttccggc
     4201 tcgataagat cggccagctt gaccgcttgc gcttccttga tctccactgc ggtacggtga
     4261 cggacgaaga ccggcttgcc ctgccaggac accacgatac cctggccttc cacgatcggc
     4321 gccaggttca cgtcgatcgc cgacaacgcc aatacgtcct tggaagggtt catcgagtcg
     4381 accagcggcc aggctatcgc accggctccg accaccgcgc cagcggcggt gatgagttgc
     4441 agaaagtcgc gcttgctcac atcgccggaa ggagcgtgat ggatagcggc agcggagtcg
     4501 gccatacttt ccctcgagtt accgtttcag ccaaaccccc gcctctcccc ggcagacatg
     4561 tctgaccgcg agccgaccct gcggccggct cggaattcca attcgttgcc tgccgggttg
     4621 ccccgaaagt ggcgttcggc gcagtctagg gaccggcctc gcctgctgca acaagctgcc
     4681 agcaggggtt atcccgactg tcgcgcagga acaagccccc gatgatcgaa aatccaccta
     4741 ccgtggcgca cgaaccactc aaaccggccg ccaaagcctg gttcgaacgg ctacgcgatc
     4801 gaatctgcgc ggcattcgaa gcgatcgagg acgcccacga aggcccgctg agcgatcgtc
     4861 cgcccggacg attcgaacgc atcgcctggc accgtcccac agaggacgac caggacggtg
     4921 gcggcggcgt catcagcctc atgaagggcc gcgtgttcga aaaagtggga gtgaacgtct
     4981 ccacggtctg gggtgaattc agcccggatt tccgagcgca aatccccggc gcggccgagg
     5041 acccgcggtt ctgggccagc ggcatcagcc tcgtcgccca catgcaaagc cccctggtcc
     5101 ccgccgctca cttcaacacc cgcatgctga tcacgacgaa gggctggttc ggcggcggcg
     5161 gcgacctgac cccgatgcgg ctggaaaccg aaccggcggt gatcgacgcg gccgacttcc
     5221 acgccgcctt ccgaaccgca tgcgaccgcc acgatccggc ctactacggg acattcaagg
     5281 cctggtgcga tcgctacttc tatctgccgc accggcagga gccgcgcggc gccggcggca
     5341 tcttcttcga ccaccacgcc accggggacg tcgaggccga cttcgccttc acccgcgacg
     5401 tgggagaggc attcctggac gtctatcccc ggatcatccg acggaggatg ggccaatcgt
     5461 ggacccctgc agagcgagac catcaactcg tccgtcgcgg ccgctacgtc gaattcaacc
     5521 tgatccacga ccggggaacg ctgttcggcc tgaagaccgg cggcaacgtg gaggcgatcc
     5581 tgatgagcct gccgccggag gtgcgctggc cataaagtcc ggattacagc gggatcaaag
     5641 ggccaccagc cctttgtggg tccagggcga agccatggcc ttccctgggc atcgccgtct
     5701 gcccaagcac ccagccctcc caccgccgga tccacagatc gtccggcgcc gcgtccggcc
     5761 ggttgcctgc ccgaacgttc aatacgcaca gcactcccag gacactgtcg
//
LOCUS       DATAVD010000334         1985 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3382522, whole genome shotgun sequence.
ACCESSION   DATAVD010000334 DATAVD010000000
VERSION     DATAVD010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1985
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3382522"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..358)
                     /locus_tag="VHX39_06205"
     CDS             complement(<1..358)
                     /locus_tag="VHX39_06205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990745.1"
                     /translation="MPVAQADDAEHFPIGQSGASVAIYPYHHAERPHAGGGHWGMLLV
                     DGFPFLVTTRHIFFTTPEKVGNEGPGKKFYHDHLRPQQIVTTPFEHPILIAEVDGWTE
                     LDYLVSGFSDAHRVQGI"
     gene            complement(592..1416)
                     /locus_tag="VHX39_06210"
     CDS             complement(592..1416)
                     /locus_tag="VHX39_06210"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3990746.1"
                     /translation="MLIVDGQIHLWEKGTPSPHHRQEPYSAEQAIAGMDAAGVDRALI
                     HPVLWDPDSNEIAMQAVRKYPDRFAIMGWFYLDDPNGKALVEHWKQQTGMLGLRFYFN
                     DRHKEEWVTDGTLDWLWPAAERAGVPVSLGAATFLPTVGKIAERHPGLKLIVDHMGVP
                     RASKGESAYRFQPELLALAKYPNVAVKATGQAGYAEDAYPFRSLHPHLHRCFDAFGPD
                     RMFWGTDITRMHCTWRQCVTLFTEELPWLKGRDLDLVMGEAVCNWLGWPLPASKMR"
     gene            1694..>1985
                     /locus_tag="VHX39_06215"
     CDS             1694..>1985
                     /locus_tag="VHX39_06215"
                     /inference="COORDINATES: protein motif:HMM:NF014816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3990747.1"
                     /translation="MLRLYYAPGTCALATHIALEEAGASYEAVKVDFGAQAQRSPEYL
                     ALNPKGRVPALVTDNGILTETPALLCFVAQQFPAAELAPLSDPFVLAQIQDFN"
BASE COUNT          366 a          625 c          600 g          394 t
ORIGIN      
        1 ggatcccttg cacgcggtgg gcgtcgctga acccgctcac gagatagtca agttcggtcc
       61 agccatcgac ctcggctatc agtatcggat gctcgaacgg cgtggtgacg atctgctgcg
      121 gccgcaaatg gtcgtggtaa aatttcttgc ccggtccttc gttgccgacc ttctcggggg
      181 ttgtgaagaa gatgtgccgg gtggtgacga gaaacggaaa gccgtcgacg agcagcatgc
      241 cccagtggcc gccaccggca tgcggacgct ctgcatggtg atagggatag atcgcgacgc
      301 ttgcgccgga ttgcccgatc gggaagtgct ctgcgtcatc tgcttgcgcg accggcatcc
      361 gccagtctgc ttcgttgaat aacgaacttc tgtccatgtc gtatcccttc tgttcagcat
      421 ccgcacactg cgtgcacagc taagactgcc gggctcagac tgccggcgcc cggggttcac
      481 cggggttaat aaatccagct tccattcgac ggcctttttc aactgccaac aaagcaaatt
      541 cttggggtgt tgaccacccc aaggctgtgt gccgacggct gttgaggcac gtcagcgcat
      601 cttcgatgcg ggcaagggcc agccgagcca gttgcagacg gcttcgccca tcaccaggtc
      661 gagatcgcgc cccttaagcc agggtagttc ctcggtgaat agggtcacgc attggcgcca
      721 ggtgcagtgc atccgggtga tgtcggtgcc ccagaacatc cggtccgggc cgaacgcatc
      781 gaagcagcgg tgcagatgcg gatgcaggct gcggaatgga tacgcatcct cggcatagcc
      841 ggcttggccg gtcgccttga ccgcgacgtt gggatatttg gccaatgcca acaattcggg
      901 ctggaagcga taggcggatt cgcccttgct ggcgcgcggc acgcccatat ggtcgacgat
      961 cagcttgaga ccggggtggc gctcggcgat cttgcctacg gtcggcagga acgtcgcggc
     1021 acccaacgag accggcacgc cggcacgttc agcggccggc catagccagt cgagggtacc
     1081 gtcggtgacc cattcttcct tgtgccggtc gttgaaataa aagcgcaggc cgagcatgcc
     1141 ggtctgctgc ttccaatgtt cgaccagcgc cttgccgttc ggatcatcga gatagaacca
     1201 gcccatgatg gcaaagcggt cgggatattt ccgcaccgcc tgcattgcga tctcattcga
     1261 gtccgggtcc cacagcaccg gatggatcag ggcgcgatca acgccggcgg catccatgcc
     1321 ggcgatcgcc tgttccgccg aatagggttc ctggcgatgg tgcggtgacg gcgtgccctt
     1381 ttcccaaaga tgtatctgtc catcgacgat cagcatttgg cgtcctccct ttaagattgc
     1441 caggttgccg gttcagccgg cgaacggcgt cagcaattcg cgtgcatccg ccagtgtttc
     1501 caaacctgtg atggcggccg ataccgcatc gatgctcatg gtcgtttcca ccccggttcc
     1561 gatcggccga tattactcgt tctcgccact ccggccatgc cgcgaacgcc ccgcaacgcc
     1621 gaatgatagg ctggcggaag cggccgccgc ctgctaagtg ccggtcccaa accccgtcgc
     1681 aaggacaagg cttatgctcc ggctttacta cgctcccggc acctgcgcgc tggcaacgca
     1741 tatcgcgctc gaagaagccg gcgcatccta tgaggcggtc aaggtcgatt tcggcgcgca
     1801 ggcccagcgc agccccgaat acctcgcgct caacccgaaa gggcgcgttc cggcgctcgt
     1861 caccgacaac ggcatattga ccgaaacacc ggcgctgctg tgctttgtgg cacagcaatt
     1921 cccagccgcc gaactcgccc ccctgtcgga tccgttcgtg ctggcgcaga ttcaggattt
     1981 caaca
//
LOCUS       DATAVD010000335         1830 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1148214, whole genome shotgun sequence.
ACCESSION   DATAVD010000335 DATAVD010000000
VERSION     DATAVD010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1830
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1148214"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..594)
                     /locus_tag="VHX39_06220"
     CDS             complement(<1..594)
                     /locus_tag="VHX39_06220"
                     /inference="COORDINATES: protein motif:HMM:NF012242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HEX3990748.1"
                     /translation="MPVRCGIDLGTTYSSISWFDPYNNRVDTIDLETADGAKVIRSVV
                     YYPGQGDPVVVGETAWNARQQFPERVVVGIKRSMGMGYRTAAIDGVEYTPPQVSAEIL
                     KVLARDAQAYLGEEVKDVVITVPAYFGDNERAATLEAGQLAGLNVLALLPEPHAAALA
                     FAVDKVADIVDRYLLVYDLGGGTFDVTLIHATTVRDPG"
     gene            complement(817..1440)
                     /gene="grpE"
                     /locus_tag="VHX39_06225"
     CDS             complement(817..1440)
                     /gene="grpE"
                     /locus_tag="VHX39_06225"
                     /inference="COORDINATES: protein motif:HMM:NF013212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEX3990749.1"
                     /translation="MNEVSEQVASTEIQAGDSPEKEQGENPILALIAERVGAVERQVA
                     FLPPQVRQLRDKVESLATSFTEPRLKALLLGLVGVYDLVAQLVRATEASQEDSGQNHL
                     RNYRVLQSQLYMLLESNGITEITAEGAFDPLLHCALQSVPVDDPARDNLVLETIRPGF
                     RTERAVLRYAEVVVAKHSPPSQVATGPATASEESDASALQGTDGSCE"
     gene            complement(1513..>1830)
                     /locus_tag="VHX39_06230"
     CDS             complement(1513..>1830)
                     /locus_tag="VHX39_06230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990750.1"
                     /translation="MDEGISLAVSLVLRAPAEADRDVVMVTDGMPDPNRRENTLVAAV
                     EARNKKVSLSSLGVGSENVDLNFLSQLSPMSLVIDRVDGLGDAMTTLLTKSASARAGG
                     LLG"
BASE COUNT          355 a          558 c          530 g          387 t
ORIGIN      
        1 tccggggtcc cgtaccgtgg tggcgtgaat cagagtgaca tcgaatgtgc cgccgccgag
       61 atcgtaaacg agtaggtagc gatcgacaat gtcagcgact ttgtccaccg cgaatgccag
      121 cgcggctgcg tggggttccg gcagaagggc gagcacattc agcccggcca gttggccggc
      181 ctcgagcgtg gcggcgcgct cgttgtcgcc aaaatacgct gggaccgtaa tcaccacgtc
      241 tttgacttcc tcgcccaggt aggcttgggc gtcgcgcgcc agcaccttaa gaatttcggc
      301 ggagacctgc ggcggggtgt actcgacgcc atcgatcgcc gccgtcctgt aacccattcc
      361 catcgagcgt ttgatgccaa cgaccacccg ctcagggaat tgctggcgag cgttccatgc
      421 ggtttccccc acgacgacgg gatctccctg gccgggataa tagacgacgg accgaatcac
      481 cttcgccccg tcagcggtct cgaggtcaat tgtgtcgacg cggttgttat acggatcgaa
      541 ccacgagatc gatgaataag tagttcccag atcaattcca catcggacag gcatactatt
      601 ctccggacct gatttcgttc gcagcttgca tcggttctgg cggcgtgctc gcgtcgctgc
      661 cttcagcagc ggttgccggc gctgtcgtcc tgtccgcact gtccaggttg attgcgtcga
      721 cacggttgct atacggatcg aaccatgaga tagatgaata agtagttccc agatcaattc
      781 cacatcggac aggcatacta ttctccagac ttgatttcat tcacagcttc catcggtacc
      841 ttgcagcgcg ctcgcgtcgc tttcttcaga tgcagttgcc ggtcctgtgg caacctgcga
      901 cgggggtgaa tgtttggcca cgacgacctc cgcataccgg agaacggcac gctcggtacg
      961 gaaaccgggg cggatggttt ccagaacgag attatcccgg gccgggtcgt caactggtac
     1021 actttgcagc gcgcagtgca gcaaaggatc gaaggcgccc tccgcggtta tttcggtaat
     1081 gccgttggac tccagcagca tgtaaagctg cgattgcaga acccggtaat tacgcaggtg
     1141 gttctggccg gagtcttcct gtgacgcctc cgtcgcccgc accaactggg cgaccagatc
     1201 gtagactccc acaagcccca gcaacaaagc tttgaggcga ggctcggtga acgacgtcgc
     1261 aagactctcc accttgtctc tcagctgacg cacctggggc ggcagaaagg cgacctgcct
     1321 ttccacggct ccaacacgct ccgcgataag ggcaaggata ggattctcac cctgttcttt
     1381 ttccggcgaa tcgccggcct gtatttccgt tgacgcgacc tgttctgaga cttcgttcat
     1441 gattcactcc agatatgtcg atgggcggac ttttgtttcg cgaccagtgc ggagcacgga
     1501 ccggcggggg tctcagccaa gcaggccccc tgccctggcc gacgccgatt tcgtcaggag
     1561 tgttgtcatc gcatcgccaa gcccgtccac ccggtcgatg accagcgaca tcggtgacag
     1621 ctgactgagg aagttcaggt cgacattttc gctgccgacg ccgagggatg acagagagac
     1681 ctttttgtta cgcgcttcta cagccgccac caacgtgttc tcgcgccggt tggggtccgg
     1741 catgccgtcg gtcaccatca caacgtcgcg atcggcctca gcgggcgcgc ggagaacaag
     1801 gctgactgca agactgatcc cttcatccat
//
LOCUS       DATAVD010000336         2239 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_32658, whole genome shotgun sequence.
ACCESSION   DATAVD010000336 DATAVD010000000
VERSION     DATAVD010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2239
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32658"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /locus_tag="VHX39_06235"
     CDS             complement(<1..470)
                     /locus_tag="VHX39_06235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990751.1"
                     /translation="MANSVHLRRLIMVFGMTALIVLTAPAVWAADAAGCADPAGLKRY
                     DGSSIVMCVKRDFAKYVLPTGKTLTYDLSAKKGTFEDSLELEGRLAQNVYAVPENVSS
                     EDVLRNYKADLAAKGFTVLFEAARAETGPRLGEYFAGTGPGTQIWAYSPDEARYV"
     gene            654..>2239
                     /locus_tag="VHX39_06240"
     CDS             654..>2239
                     /locus_tag="VHX39_06240"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3990752.1"
                     /translation="MPPTAGETFDYIVTGAGSAGCAVAARLSESGRHRVLLLEAGPPD
                     RNPWIHIPMGFTRLFADPSINWMYESEPEPQLGNRTLYQPRGKVLGGTSSINGMVYMR
                     GNAADYDEWRQRGCTGWDYDSVLPFFKRAENQQRGPNEFHGVGGPLTVSDQPGRYELA
                     DAVVAGAIESGLPPNDDFNGAGQEGAGYFQSTTGKSRRWSTATAYLKPARSRANLIVR
                     SNALATKIQIENGTATGVSYVSNGVTHTAKANAEVIVCGGVFNSPQLLQLSGIGPGEL
                     LRQHGIEVIRDTPAVGAHLQDHFYVRLAYRCPKPITMNELANSLPRKIVAMARYVFFK
                     NGPLAANGVTAGGFGRSDPRLERPDLQFNFSPFSYASRGPQGAIAHDFPGFSLSAVHL
                     RPDARGTVKLKSPDPLMPPVIRFNFLQTQYDLQALTTGMRMARGFTKQPSLAPYVAEE
                     IVPGPQVNTDAEFEAAIRENALSNLHPVGTCRMGPEPTDSVVDPRLRVHGIGRLRVVD
                     AAIMPTVPAGNTNAPTIMIA"
BASE COUNT          438 a          744 c          662 g          395 t
ORIGIN      
        1 acatagcgcg cctcgtccgg gctatacgcc cagatctgcg tccccggccc ggtgccggca
       61 aaatactcgc cgagccgggg accggtttcg gcccgcgcgg cctcgaacaa caccgtaaag
      121 ccttttgccg ccagatccgc cttgtagttt cgcaatacgt cctccgagga gacgttctcc
      181 ggcacggcgt acacattctg ggctaaccgt ccctcgagct ccagagagtc ttcgaacgtt
      241 cccttcttgg cgctgaggtc ataggtaaga gtttttcccg ttggcagcac atacttcgcg
      301 aaatcgcgtt tgacgcacat gacgatggac gagccgtcgt agcgcttcaa cccggcaggg
      361 tcggcgcatc ccgcagcgtc ggcagcccag accgcgggcg ccgtcagaac gatcagggcc
      421 gtcatgccga agaccatgat caggcgacgg aggtgaacag agtttgccat cgatgtctcc
      481 aggctgtcgc gaagggtccg taatgatgac ccggcgaccg accgggtcac aaggccatgg
      541 gcctcgctcg ccggagcgtg ttcgcaatga ctgccgccca gggttgctcg cgccctggtc
      601 acgtgaggaa atccccgcca tcctccggcg taagcaagtc cggggtaaac accatgccgc
      661 caaccgcggg ggaaacgttc gactacatcg tcaccggcgc cggctcggcc ggctgcgccg
      721 ttgccgcccg cctcagcgag tcaggccgcc atcgcgttct gttgctcgaa gccggcccac
      781 cggatcgcaa cccctggatt cacattccca tgggtttcac tcgattattt gccgaccctt
      841 cgatcaactg gatgtacgag tccgaacccg agccgcaact tggcaaccgc acgctgtatc
      901 agccacgcgg caaggtgctt ggcggcacca gctcgatcaa cggcatggtc tacatgcgag
      961 gcaacgccgc tgactacgac gaatggcggc aacgcggctg caccggctgg gactacgaca
     1021 gcgtcctgcc gttcttcaaa agagccgaga accaacaacg cggccccaac gaattccacg
     1081 gcgtcggcgg cccgctgaca gtctccgacc aaccgggccg ctacgaactg gccgacgcgg
     1141 tggtcgccgg agcgatcgaa tccggcctgc cgccgaacga cgattttaac ggggcgggcc
     1201 aggaaggcgc tggatatttc cagagtacca caggcaaaag ccgtcgctgg agcacggcca
     1261 ctgcgtatct gaaacccgcc cgatcgcgcg ccaacctcat tgtccgctcc aacgcgctgg
     1321 cgacgaaaat ccagattgaa aatggcacgg cgaccggcgt gagctatgtc agcaacggtg
     1381 tcacccacac ggcgaaagcc aacgcggaag tgattgtgtg cggcggcgtg ttcaattcgc
     1441 cgcaattgtt gcaactctcc ggcatcgggc cgggcgagtt gctgcgtcaa cacggcatcg
     1501 aagtgattcg tgacacgcct gccgtcggcg cacatttgca ggatcatttc tacgttcgcc
     1561 tcgcgtatcg ttgccccaaa ccgatcacca tgaacgaact cgccaacagc ctgccgcgca
     1621 aaatcgtcgc gatggcgcgt tacgtgtttt tcaagaatgg tccgctcgcc gccaacggtg
     1681 tgactgccgg aggtttcggc cgcagcgatc cgcgcctgga acggccagac ctgcagttca
     1741 atttttcccc gttcagctac gcctcgcgcg gcccccaggg cgctatcgcg catgatttcc
     1801 ctggcttcag cctcagcgcg gtgcatttgc gtccggacgc gcgcggaacg gtgaagctga
     1861 aaagtcccga cccgctgatg ccgccggtga tccggttcaa cttcctgcag acgcaatacg
     1921 atcttcaggc gttgaccacc ggcatgcgca tggcacgtgg tttcaccaaa cagccatcat
     1981 tggcgccgta cgtggcagag gaaatcgtgc ccggcccgca ggtcaacacc gatgccgagt
     2041 tcgaagcggc gatccgggaa aatgcgttat ccaacctgca tccggtcggc acctgtcgga
     2101 tgggaccgga accgaccgac agcgtggtcg atccgcggtt gcgcgtgcac ggtatcggca
     2161 ggctgcgtgt cgttgacgcc gcgatcatgc cgaccgtgcc ggccggcaac accaatgcgc
     2221 caaccatcat gattgccga
//
LOCUS       DATAVD010000337         4325 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2265629, whole genome shotgun sequence.
ACCESSION   DATAVD010000337 DATAVD010000000
VERSION     DATAVD010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4325
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2265629"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..613
                     /locus_tag="VHX39_06245"
     CDS             <1..613
                     /locus_tag="VHX39_06245"
                     /inference="COORDINATES: protein motif:HMM:NF013964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEX3990753.1"
                     /translation="RRLPTVIQGCALMAISKRLRFEILRRDNHTCRYCGAQAPDVPIT
                     VDHVIPGTLGGNDEPSNLVAACKDCNAGKSSVPADAPLVADVAADAIRWAAAMKIVAE
                     RRAQEIEDRMETFGWFNEIWCRWTDWRDDPFEVPGGYYPILGYLNAGLSKREMEDLVA
                     VAMRANNVRDRWSYFCGCCRKRLEQNAELAAEIIQLEGGRTDG"
     gene            606..1496
                     /locus_tag="VHX39_06250"
     CDS             606..1496
                     /locus_tag="VHX39_06250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990754.1"
                     /translation="MANAAGMLKESIWRDKEFRALPRTAQATYAQLISQLDLNRAGLQ
                     PLLVAKWIKGCDEISAEDLLADLKVLEQHRFVFVDDDTDELFVRSYMRHCDVGRYPNI
                     LKNALRCASLVASEKLRFELAQELRRLRKADADRVADAIEPTSFEPETRNRSGTQMNG
                     SGTVPDGLKGSETVREPQGSGSGSGSVTLGSSSGGEDPAESRIDESAAVPNFPDHCID
                     HRQLPDPPPCHRCRKTREANEAQARTNSDAAYQAAAAERAQRAASQAACTACDPEGWL
                     LDIWGEPTDPAIRCQHPGVA"
     gene            1493..1771
                     /locus_tag="VHX39_06255"
     CDS             1493..1771
                     /locus_tag="VHX39_06255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990755.1"
                     /translation="MTDHADRASLDDDSEAAFWRDLRNDAGKDRTNFGDQNDWFKAER
                     AKANRVICFDCGACAGDNCRRIGDINSVELQRFPAHARRVNTAKALFG"
     gene            1768..2169
                     /locus_tag="VHX39_06260"
     CDS             1768..2169
                     /locus_tag="VHX39_06260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990756.1"
                     /translation="MNDKQHDIDAEFRNIVFGDGLPPAKPMCECNCNSGPYRHADRLC
                     GRHAVVHVALHRWADCDKPADWDGPAAQVDVDGNICAVMCARCANFAVQAAKQSIRKL
                     AGAFPSGVIPHCPSCGRPTIEAADICKVTTL"
     gene            2166..2339
                     /locus_tag="VHX39_06265"
     CDS             2166..2339
                     /locus_tag="VHX39_06265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990757.1"
                     /translation="MTVADLIEQLRNYAPDTPVLVVVEDEFDSSQPVDIAVVQRRCPL
                     DRSGPYIELVGSL"
     gene            2354..2932
                     /locus_tag="VHX39_06270"
     CDS             2354..2932
                     /locus_tag="VHX39_06270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990758.1"
                     /translation="MDLSLVNAGVVVVTDDAGVACPTIIRSCGRDGREGETYRQRSRR
                     VRKQVRDVLELLDPAGELDMAVLEGPIYGGNFTGSYFDRAILWGGVYGALDARNVPVA
                     VIPPTTGHIFTTGKGSMPKDPKAFKALIVSSVQKMLPNSPIANHDVADAAGLALMGAM
                     SLGISMPFRAQRWQYEAVHTAVWPHGKPVRYG"
     gene            2925..3239
                     /locus_tag="VHX39_06275"
     CDS             2925..3239
                     /locus_tag="VHX39_06275"
                     /inference="COORDINATES: protein motif:HMM:NF014520.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WhiB family transcriptional regulator"
                     /protein_id="HEX3990759.1"
                     /translation="MGSVRRSRQVVPSQAPSWRLHAACRPDNGHDPALWFPRETPEWA
                     TREEKRVAQRIRHEMTEQARGICMTCEVRAECMQYATDTNESEGIWGGLTPEERGVTP
                     LR"
     gene            3379..3786
                     /locus_tag="VHX39_06280"
     CDS             3379..3786
                     /locus_tag="VHX39_06280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990760.1"
                     /translation="MLMGEGQNIDMWCLDDTDNEPVSYVDYPPILGVWIVGTGHPMPD
                     ELAARGMLDGLTGTGFHGYEIPVDERIDYRDTCVMANGLVWHVFTAVVGQVQPVETGY
                     GKVSTVGDIADKVAERRRDELQHVADMERENHA"
     gene            3779..3952
                     /locus_tag="VHX39_06285"
     CDS             3779..3952
                     /locus_tag="VHX39_06285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990761.1"
                     /translation="MPSVDLLWVCAAAWFGSFAGMVAVLLRVKAAIERLIEKDIADNN
                     IAGVDVEITVRHA"
     gene            3999..4325
                     /locus_tag="VHX39_06290"
     CDS             3999..4325
                     /locus_tag="VHX39_06290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990762.1"
                     /translation="MRRNHGNVVIAEVLFRRVTFQSTYMANVDVPGGVLIDADGALGP
                     LSTAVRAGVQTLVAIRQTDELLWVPVKADLNPTGYWAIEIVPLVDYARAALKPDEDII
                     REAHQR"
BASE COUNT          881 a         1306 c         1356 g          782 t
ORIGIN      
        1 tcgccgatta ccaacagtca tccaggggtg cgcactgatg gccatatcaa aacgactccg
       61 cttcgaaatc ctgcgccgtg acaaccacac atgccgatat tgcggtgctc aagccccgga
      121 tgttcctatc actgtcgacc atgtcattcc gggaacacta ggcggaaacg acgaaccatc
      181 caatctcgtt gccgcctgca aagactgcaa cgctggaaaa tcttctgtgc cagccgacgc
      241 gccgttagtg gccgatgtcg cggccgacgc tatccggtgg gcagcagcca tgaagatcgt
      301 cgcggaacgg cgtgcacaag agatcgaaga ccgcatggag acattcggtt ggttcaacga
      361 gatctggtgc cgctggactg actggcgcga tgacccgttt gaggtacccg gcggttatta
      421 cccgatcctc ggatacctca atgccgggct gtccaagcgc gagatggagg atctcgtcgc
      481 cgtcgctatg cgcgcgaaca acgtacgtga ccgatggtcg tacttctgcg gatgctgtcg
      541 aaaacggctt gagcagaacg cggaattggc cgcagaaatt atccagttgg agggtggccg
      601 caccgatggc taacgcggca ggcatgttga aagaatccat ttggcgcgac aaggaattcc
      661 gcgcgctacc tcgcactgcg caggccacct acgcacagct gatcagccag ctcgacctca
      721 accgcgccgg cctacagccc cttctagttg ccaaatggat caagggttgc gacgagatct
      781 cggccgaaga cctcctggcc gacctcaagg tgctcgagca gcaccgattc gtgttcgtcg
      841 acgacgacac cgacgagcta ttcgtgcgct catacatgcg gcactgcgac gtcggacgct
      901 acccgaacat cctcaagaac gcgctccgct gcgccagcct ggtcgcctcc gagaagctcc
      961 gttttgagct cgcgcaggag cttcgacgcc tacggaaggc ggacgcggac cgggtcgcgg
     1021 acgcgatcga accgaccagt tttgagcccg aaacgcggaa ccgttccgga actcaaatga
     1081 acggttccgg aacggttccc gatgggttaa agggttccga aaccgttcgc gaaccccagg
     1141 gatctggatc tggatctgga tcagtcacct tgggtagttc ttcaggtggg gaggatcccg
     1201 ctgaatctcg catcgacgaa agcgctgccg taccgaattt tccggatcac tgcatcgacc
     1261 accgacaact accagaccca ccgccgtgcc atcgctgccg aaaaacccga gaagctaacg
     1321 aggctcaagc ccgcaccaac tccgatgccg cctaccaggc cgccgccgcc gagcgcgccc
     1381 agcgagccgc atcgcaagcg gcgtgcaccg cttgcgatcc cgagggctgg ctgctcgaca
     1441 tctggggcga gccaaccgat ccagccatcc gatgccaaca tccgggggta gcatgaccga
     1501 ccatgccgac cgcgcgagcc ttgacgacga ttctgaggcc gcgttctggc gcgatctgcg
     1561 caacgatgcc ggtaaggatc ggacgaattt cggggatcaa aatgattggt tcaaagccga
     1621 acgcgcaaaa gcgaatcgcg ttatctgttt cgactgtggt gcctgtgcgg gcgataactg
     1681 tcggcgtatc ggagatatca attccgtaga actgcaaagg ttcccggcgc acgcccgtcg
     1741 cgttaatact gctaaggcgt tgttcgggtg aacgacaagc agcacgatat cgacgcggag
     1801 ttccggaaca tcgttttcgg cgacggcctt ccgccggcca agccgatgtg cgaatgcaac
     1861 tgcaactcgg gcccgtatcg gcacgctgac cggttgtgtg ggcggcatgc ggtggtgcat
     1921 gtggcgttgc atcgttgggc ggattgtgac aagccggcgg attgggatgg gccggccgcg
     1981 caggttgatg tggacggcaa catttgcgcg gtgatgtgtg cgcggtgcgc gaacttcgct
     2041 gtgcaggccg ctaagcagag tatccggaag cttgctggcg cgttcccgtc tggggtgatt
     2101 ccgcattgcc cgtcgtgcgg gcgcccgacg atcgaggccg ccgatatctg caaggtgacc
     2161 acgctatgac cgtcgcagat ttgattgagc agctgaggaa ctatgcgccc gacacgccgg
     2221 tgctcgtcgt tgtcgaggac gaattcgatt catcgcagcc cgtcgatatc gcggtggttc
     2281 aacgccggtg tccactagac cggtccggcc cctatatcga gctggtgggc tcgctatgac
     2341 atcgattgcg ggcgtggact tgtcgctagt caatgcgggt gtcgtggtgg tcaccgatga
     2401 cgccggcgtt gcttgtccga cgattatccg atcgtgtggg cgcgatggcc gcgagggcga
     2461 aacatacagg cagcgatccc gccgtgtccg taagcaggtg cgcgatgtgc tggagctcct
     2521 cgatccggcc ggggagctgg acatggcggt gctcgagggt ccgatctacg gcggcaattt
     2581 caccggcagc tatttcgatc gcgcgattct gtggggtggt gtctacggcg cactggatgc
     2641 ccgcaatgtg ccggtcgcag tcattccgcc gacgaccggc cacattttca caaccggcaa
     2701 ggggtcaatg ccgaaggatc ccaaggcatt taaagctctg atcgtgtcga gcgtgcagaa
     2761 gatgttaccg aattcgccga tcgcgaacca tgacgtcgcc gacgctgccg ggttggctct
     2821 catgggtgcc atgtcgctgg gcatcagcat gccgtttcgt gcgcagcgct ggcagtacga
     2881 ggccgtgcac accgctgttt ggccgcacgg aaagccggtg cgatatgggt agcgtccgta
     2941 ggtcgcggca ggtggtgccg tcgcaggccc cgtcgtggcg gttgcatgcg gcgtgccgcc
     3001 ccgacaatgg gcatgatccg gcgttgtggt ttccgcgcga aacaccggaa tgggcgaccc
     3061 gcgaggaaaa acgcgtggcg caacgtatcc ggcacgagat gactgaacag gcgcgcggta
     3121 tctgcatgac gtgtgaggtg cgtgcggaat gcatgcagta cgcgacggac accaacgaga
     3181 gcgaaggcat ctggggtggt ctcacgcccg aagaacgcgg cgtgacaccg ctccgctgac
     3241 ccaactacga aaggatgcac gatgcgaatt gtccgatacg agctggaaat cgttgactac
     3301 caacagattc agccactatg gcctggacgg atcctagcgg tcaaaccggg ccgaatacgc
     3361 cagcacgtcc gaaattcgat gctgatgggc gaaggacaga acatcgacat gtggtgcctc
     3421 gacgacaccg acaacgagcc cgtgtcgtat gtggactacc ctccgattct cggcgtgtgg
     3481 atcgtcggca ccggacatcc aatgccagac gaactcgctg ctcggggaat gctcgacgga
     3541 cttacgggca ccggatttca cggctacgag atcccggtag acgaacgcat cgactaccgg
     3601 gacacctgcg tcatggcgaa cggcctcgtg tggcacgtgt ttacggccgt cgtcggccag
     3661 gtgcagcccg tcgaaaccgg ctacgggaag gtgtccaccg tcggagacat cgccgacaaa
     3721 gtcgccgagc gcagacgcga tgaactgcaa cacgtcgcgg acatggagcg cgaaaaccat
     3781 gcctagcgtt gacctgttgt gggtgtgcgc cgcagcgtgg ttcggatcat tcgccggaat
     3841 ggtcgcggtg ctgctccgcg tcaaagccgc gatcgaacgc ctgatcgaga aagacatcgc
     3901 agacaacaac atcgccggcg tcgacgtcga aatcacggtc cgccatgcct agcccgccga
     3961 gcctccgcaa cgccctgatc cgggtgtaca gcctggacat gcgccgcaac cacggcaacg
     4021 tcgtgatcgc cgaagtgctg ttccgaaggg tcactttcca atccacatac atggccaacg
     4081 tcgacgtgcc cggcggcgtt ctgatcgacg ccgacggcgc gctcggcccg ctgtcaaccg
     4141 cggtgcgcgc cggcgtgcag accttggtgg cgatccggca aaccgatgag ctgctgtggg
     4201 ttccagtcaa agccgacctg aacccgaccg gctactgggc aatcgaaata gtgccgctcg
     4261 tcgactacgc acgggccgcg ctgaaacccg acgaagacat catccgggaa gcgcaccaac
     4321 gatga
//
LOCUS       DATAVD010000338         2505 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_589417, whole genome shotgun sequence.
ACCESSION   DATAVD010000338 DATAVD010000000
VERSION     DATAVD010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_589417"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..402
                     /locus_tag="VHX39_06295"
     CDS             <1..402
                     /locus_tag="VHX39_06295"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3990763.1"
                     /translation="RGAVVNTASVAGLVASPGMPAYVASKHAVIGLTKTAAGEVARSG
                     VRVNAVCPGPIDTRMIHSLESMLNPGDPASVGSRYQENIPIGRYGTAEEVANLVQFLC
                     SDLASNITGAQYVVDGGRTATGGAVTNNLIR"
     gene            419..1834
                     /locus_tag="VHX39_06300"
     CDS             419..1834
                     /locus_tag="VHX39_06300"
                     /inference="COORDINATES: protein motif:HMM:NF016224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HEX3990764.1"
                     /translation="MHSILRSTGRLWNSLDNLINDRPIKVAITGLSRSGKTVFLTSLI
                     ANLLAMGTGKPTMPALRAHIDKGGKDRLRSIRLVPARAGTTPRFDYRGKLVDLAAAQP
                     KWPARTEDLAEIELELEIRAGNGLLGQMRGLSGTPRVRLQLLDYPGEWLLDLPMLDQS
                     YRRWSADTLDRLRQKPRSDVAAEFLSFVSHIDPTRPADDALILRGHRLYKAALERCRA
                     EFGMRYLQPGRFLTMGARNDAPFLWFFPADNLPSYARQNSIADLLDARFVAYKTEVRA
                     SFFDTNFRAFDRQIVLVDTLGALHAGRGAFEDTETAIGDIAACLAASDSILPRFLGGT
                     GIEHIAFVATKADHVPELHRNNLRALMRDMVRLAREHGTDAVSYHAAASVVSTTDGWA
                     DQPDGHREPVVWGTKLGETQSRAYRVGNVPIAHPPDSFWSSRYFELPAFTPPPIDPNA
                     VNGIPHLGLDQILVDLIGDRL"
     gene            1831..>2505
                     /locus_tag="VHX39_06305"
     CDS             1831..>2505
                     /locus_tag="VHX39_06305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990765.1"
                     /translation="MNAFQPGFVGDPKQPDPPPLPTETIERPLDPGFIDTISAPPQAV
                     AVLVPAAPPSVGLGALGWIGTGLGILVVGGSLLSLIGFIVDQMARSSALGWATLATVA
                     AGVLAVLYGVGREIRSYRRLTRVDRLRSLLRPPAVPVEIARTECTEWLQSVADKLADP
                     GSVRLAMNGCTNTDEVRAMLAHRAIEPLREQATAIGARAASQGAAMVAIIPSPALEGL
                     AAGLRSL"
BASE COUNT          443 a          760 c          794 g          508 t
ORIGIN      
        1 agaggcgcag tggtgaatac tgcctctgtc gccggcctgg tcgcctcgcc cggcatgccg
       61 gcttacgtgg catcgaagca cgcggtgatt ggtctgacca agaccgctgc cggcgaggtt
      121 gcgcggtccg gtgtgcgggt gaacgccgta tgcccaggac cgatcgatac gagaatgata
      181 cattctttgg aatcgatgct gaaccccggc gatcccgcca gtgttggttc gcggtatcag
      241 gagaacattc cgattggccg ctacggcacg gccgaagaag tcgcgaatct ggtgcaattc
      301 ctgtgttccg acctcgcctc aaacatcacg ggtgcgcaat atgtggtgga cggcggccgc
      361 acggcgacag gtggcgcggt caccaacaat ctgatccgct aagcgctgcg ttccaaactt
      421 gcacagcatt ctgcgttcca ctgggcggct ttggaactcg ctcgacaatt tgatcaatga
      481 ccggccgatc aaggtggcga ttaccggatt gtcgcgctcg ggcaagacgg tgtttctgac
      541 ctcgctcatt gcaaatctgc tggcaatggg aaccggcaag cccacaatgc cggcgttgcg
      601 ggcacatatc gacaagggtg gcaaggaccg gttgcgcagt atccggttgg ttccggcgcg
      661 ggctggaacc accccgaggt tcgactaccg gggaaagctt gtcgatcttg cggcggcgca
      721 accaaaatgg cccgcgcgga ccgaggatct tgcagaaatc gaactcgaac tggagatccg
      781 cgccggcaac ggcttgcttg gacaaatgcg cggcctgtcg ggcacgccca gggtgcgttt
      841 gcagttgttg gattatccgg gcgaatggtt gttggacctg ccgatgttgg accagtcata
      901 tcgccgctgg tcggctgaca cgctcgatcg cctgcggcag aagccacggt cagacgtcgc
      961 ggctgagttc ctgtcgttcg tgagccatat cgatccaacc cggccggccg acgatgcgct
     1021 gatcctgcgt ggccatcgtt tatacaaagc ggcgctggag cgatgccgtg cggaattcgg
     1081 tatgcgctat ctgcagccgg gccggtttct gacgatgggc gcgcgcaacg atgccccctt
     1141 cctgtggttt tttcccgccg ataatctgcc gtcctatgct cggcagaact cgatcgcgga
     1201 cctgctcgat gcacggttcg tggcgtacaa gaccgaagtc cgcgcatcct ttttcgacac
     1261 aaatttccgt gccttcgatc gccagatcgt cctcgtggac acgctcggcg cactgcatgc
     1321 cggccgtggc gcattcgaag ataccgaaac tgcgattggc gatatcgctg cctgcctcgc
     1381 ggcgagcgac tcgatcctgc cacgcttcct aggtggcacc gggatcgagc atattgcctt
     1441 cgtggcgacc aaagcggatc acgtgccgga gttgcaccgc aacaatctgc gtgcgctgat
     1501 gcgtgatatg gtgcgtttgg cacgcgaaca cggaaccgat gcggtctcct atcatgctgc
     1561 agcttcggtc gtttcgacga ctgacgggtg ggctgaccaa cctgacgggc atcgcgaacc
     1621 ggtagtgtgg ggaacgaaac ttggggaaac gcagtcgcgg gcctatcgcg tcggcaacgt
     1681 cccgatcgcg cacccgccgg acagcttctg gtcaagccgt tatttcgagc tgcccgcttt
     1741 cacgccgccg ccgatcgacc caaatgcggt gaacggtatc ccgcatctcg gtctggacca
     1801 gatcctggtg gacctgatcg gagacaggtt atgaacgcct tccagcccgg ctttgtcggc
     1861 gacccgaaac aaccggaccc gccgcccctg ccaaccgaaa cgattgagcg tccgcttgac
     1921 ccgggcttca tcgacaccat aagcgcgccg ccccaggcag ttgccgtact tgtgcccgcc
     1981 gccccacctt cggttggcct cggtgctctt ggttggatcg gcactgggct tggcattctg
     2041 gtcgtgggcg gttcgttgct gtcgttgatt ggcttcatcg tcgatcaaat ggcccgttcc
     2101 tcggcgcttg gttgggccac cctggcgaca gtcgcagcgg gcgtgctcgc ggtgctttat
     2161 ggggtcggtc gcgaaatccg ctcgtatcgc cgtctgacac gggtcgacag gctgcggagt
     2221 ttactacgac cgcccgcggt gccggttgag atcgcgcgca cggaatgcac cgagtggctg
     2281 caatcggtgg cagacaaact ggcagatccg ggctcagtcc gtctcgcgat gaacggctgc
     2341 acgaacacag atgaagtacg cgccatgctg gcacatcgag cgattgaacc gctgcgcgaa
     2401 caggcgactg cgattggtgc acgggcggct tcacagggcg cggcaatggt cgcgatcatt
     2461 ccgtctccgg cgctggaagg actggccgcc ggcttgcggt cgttg
//
LOCUS       DATAVD010000339         2525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_32858, whole genome shotgun sequence.
ACCESSION   DATAVD010000339 DATAVD010000000
VERSION     DATAVD010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2525
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32858"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..577)
                     /locus_tag="VHX39_06310"
     CDS             complement(<1..577)
                     /locus_tag="VHX39_06310"
                     /inference="COORDINATES: protein motif:HMM:NF018458.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1217 domain-containing protein"
                     /protein_id="HEX3990766.1"
                     /translation="MSSIVSGVDYNLLFAPDSTANTSAAILNALYSSTPTSVGTFAST
                     GDSLLDLKLAQKNQTADVALVAKEPVVQQAIAAFTTAVNSATNIKTALSNPNVQQVLL
                     TASGLSNYIGQTALVQKAFMSDPTDPKSLVNQLGDSTLLATVQTYDFAKNGLAELKNP
                     QILATLTNGYAEVTWRQSLNAATPGLSNALDF"
     gene            complement(735..1622)
                     /locus_tag="VHX39_06315"
     CDS             complement(735..1622)
                     /locus_tag="VHX39_06315"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX3990767.1"
                     /translation="MRLQQRIRRDQARHTDDWLITYADTITLLLCLFVITLTMKTGVK
                     PPMSEAAAPGNQTTSQEGVFWGLPAIRSFTPITEAATDAISPAPSRPAAAAAATEAQA
                     TEDTERFAYTPPPVRTPPTAPPEQAVRPAQVETEPVRSSLPEVVARLSSQGTPIVAQS
                     GDRITTLQIGSAAFFGSGSAALSNAGKAILSDVAATLVSREFAAYHITIEGHTDDTPI
                     STPQFQSNWELSAARAAAVVRFLLDLGVPAGKLTASGYADTVPIAPNRGADGTVIAEN
                     QARNRRVVIRLEKIDKAKQ"
     gene            complement(1619..>2525)
                     /locus_tag="VHX39_06320"
     CDS             complement(1619..>2525)
                     /locus_tag="VHX39_06320"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEX3990768.1"
                     /translation="VPPYARGPVVGAVFGLVMLVSPIAFSGNGFLMLFGLTGLIIVGG
                     GVIATAFMSFSAVDVRCALHAIPAMLRHADAAPTDLRSDMTDIIHWARQIRPNGINAL
                     RGSLDTDSVRYPFINYGLNMVLSEYRPEDVRAMMETAADATYDRDCVPVDVLRAMTSH
                     APAFGMVGTLIGMIVMLCELNDNISSTGAALAVAFLSTLYGVVSARMIYMPAAARLQQ
                     QVDEDQRRHTLITEGMVMLASGETPSHIQDRLNGFLRPEQHDYFDVIANATETSAAVA
                     GNSSSRPGGPNASPRTPKLLGLVGT"
BASE COUNT          465 a          747 c          806 g          507 t
ORIGIN      
        1 gaaagtcgag cgcattcgac agcccaggag tcgcggcgtt aagcgattgg cgccacgtga
       61 cctcggcata gccattggtg agcgtggcca ggatttgcgg gttcttcagt tcggcaaggc
      121 cattttttgc gaagtcatag gtctgcacgg tggccagcaa cgtgctgtcg cccagttggt
      181 tcaccagcga tttgggatcg gtcggatcgg acatgaatgc cttttgcacc aatgccgtct
      241 gcccaatata attggagagg ccacttgcgg tcagcaagac ttgctgaacg tttggattgc
      301 tgagggcagt tttgatgttg gtcgcactgt tcacggcggt ggtgaacgcg gcgatggcct
      361 gctgaaccac gggttccttc gccaccagcg ccacatcggc ggtctggttt ttctgcgcca
      421 gcttgaggtc gagcagcgag tcgccggtcg atgcgaaggt gcccaccgac gtcggcgtgc
      481 tgctatagag agcgttcagg atcgccgcag acgtgttggc cgtgctgtcc ggcgcaaaca
      541 gcaggttgta gtcgacgccg ctgacaatac tgctcatgtt cgctgcatcc gtgctgccct
      601 ctgggcccgg gaggaggacc caccgtctgg gctgggatcg acctccgaac cgaaacgcaa
      661 tcgatccgcc ggtttaaata ataccaccga aaacatgaat aattccttaa cgcccgcgtt
      721 cgacaccggc ggcgttactg tttcgctttg tcaatcttct ccagtctgat caccactcgc
      781 cggttccgcg cctggttttc cgcaatgacc gttccgtcag caccccggtt gggtgcgatg
      841 ggaaccgtgt cggcataacc cgaagcggtg agtttgcctg ccggaacacc cagatcgagc
      901 aagaaacgca caacggcggc ggcgcgcgct gcggacagtt cccaattgga ttggaattgc
      961 ggcgtgctga tcggcgtatc gtcggtgtgg ccctcgatcg tgatgtggta tgcggcgaac
     1021 tcccgcgaca ccaacgtggc ggctacgtcg ctgaggatag ctttcccggc attgctcagg
     1081 gctgcggaac cgctgccgaa aaacgccgcg ctgccgattt gcaaggtggt gatccggtcg
     1141 ccgctttggg caacgatcgg cgtgccctgg gaactcagac gcgcgacaac ttcaggcagc
     1201 gaagaccgta ccggttcggt ttccacctgc gccggacgaa ccgcctgctc cggcggtgcc
     1261 gtcggcgggg tgcgaactgg cggcggcgta taggcaaatc gttcggtgtc ctcggtcgcc
     1321 tgcgcctcgg tcgcggcggc agcagcggcg ggcctgctcg gcgccggcga aattgcgtcg
     1381 gtcgcggcct cggtgatcgg tgtgaacgaa cgaatggctg gcagacccca gaagacacct
     1441 tcctgtgaag tggtctgatt gccgggtgcc gctgcctcgg acatcggcgg cttcacgccg
     1501 gtcttcattg tcagagtaat gacgaacaga cacagcaaca gcgtgatcgt atcggcgtag
     1561 gtgatcagcc agtcgtcggt atgcctggcc tgatcgcgcc ggatgcgttg ttgcagcctc
     1621 atgtgcccac caggcccaga agtttcggcg tgcgcgggct ggcattgggt ccgcctgggc
     1681 ggcttgagct gttgccggcg actgcggcgc tggtctcagt cgcattggcg atcacgtcga
     1741 aataatcgtg ctgctcgggc cgtaggaaac cgttgagccg gtcctggatg tgtgacggcg
     1801 tttccccgct tgcgagcatc accatgcctt cggtgatcag ggtgtgacgg cgctggtcct
     1861 cgtccacctg ttgttgcagt cgtgctgcgg cgggcatgta aatcatacgg gccgaaacga
     1921 caccgtacag cgtggacagg aacgccactg cgagtgcggc cccggtgctg gaaatattgt
     1981 cattcaattc gcacaacatc acgatcatgc cgatcagcgt gccgaccatg ccgaaggccg
     2041 gtgcgtgact ggtcatggcg cgcagcacgt cgaccggaac gcaatctcgg tcataggttg
     2101 catcggctgc ggtttccatc atggcgcgca cgtcctccgg ccgatattcg ctcaacacca
     2161 tgttgagccc gtaattgatg aacgggtacc gcacactgtc cgtgtcgagg ctgccgcgta
     2221 aggcgttgat gccatttggc cggatctgcc gagcccagtg aatgatgtcg gtcatatcgg
     2281 agcgcagatc ggttggcgcg gcgtccgcat ggcgcagcat cgccgggatc gcgtgcagag
     2341 cgcaccggac gtcaactgcc gaaaagctca tgaaagccgt cgcaatcacg ccgccgccga
     2401 cgatgatcaa tccggtcaga ccgaacagca tcaggaagcc attgccgctg aaagcaatcg
     2461 gactaaccag cataacgagg ccaaaaacgg cgcccaccac tgggcccctc gcgtaaggcg
     2521 gcacg
//
LOCUS       DATAVD010000340        12230 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1521436, whole genome shotgun sequence.
ACCESSION   DATAVD010000340 DATAVD010000000
VERSION     DATAVD010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 12230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12230
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1521436"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3373)
                     /locus_tag="VHX39_06325"
     CDS             complement(<1..3373)
                     /locus_tag="VHX39_06325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990769.1"
                     /translation="MADPATALANLRAAIASAIAGPSGFALDSAFLTSGLNDPGVTVP
                     ATYDTDLGKAFQVAATAFTVTGSAGGVGPVVNGQFIVTGAQVPVINGNGTASATLLFT
                     TTSDGSGGVVLVVQIASAPGAWTWTNSFPYATGYPFNIMPVTAAQFYFSTATGAYPWA
                     QPAGVPVVAGPKQTLLAKIAFPQPANAYLALFAGLLAPSAPLDFSGTFDLSSYGGPDF
                     TTGTILPSGTFTALLSTAQYTFATYLTVSRPTLSISIPQPSDDDISKQNFAQYATLAF
                     ATDLLLQGVSAGAYTLEVEVAPATTGPAITYAVALTPQTAQLLGPASAIELIGGKGSY
                     FDGTPTFLQQYLTSFGLAGMTLSGTLAASSVSVNQVTVKLGTAPGHDLNWQPLPAPTP
                     DFAFTVQSFALDWSVSNPFTKATFSYLFSTSFSILPTVFRKPDGSPGGVFTVVFTSDQ
                     VFIASFDGSASLADFLAVVSGGLISSPASIPVGITVSDISLQLDYNSQTFVFSSGVTV
                     DFPFLKIDGTDIFAVSGGLITLSAVSASSNSGTQLQTGSGTVWSGSIGGLVTICGLDV
                     NVSVAYVGGGDDAGWTLAADLAEPVDVSALIAQFFVTTTGYVFPSFLLGSLTITSLGA
                     TCFIPDDNTAKNTYTVSTTFDWVFSFGDQSVGIKDAAIDLSYDGTAFSGSASGTWLYT
                     PINLSLGFGYTFEADGNQTLFVTWQGFTATYASAQETVTFTLKGWSIGTLIESLVSTL
                     FEPNFSLPAPWSLLNQISLDGLSITVSLSNDKPITLTGSYTLSSPLDLGFITIKGISL
                     TRTPADGTSPGKVMLSIDGSAPPGLEGSLGNLLKPEGQSVQDMPDVPGQGNEYFKLNL
                     LALGQRVGIQGYKDFTSTQAAITALAGVPQTKGTQNPVVPNNTTTGQPYYNAESNWLI
                     ALHFNVLKVGDIWAVDVQLVFNDPDLYGMRLALNGEKTGGLAGFVIDILYKKITDDVG
                     LFQIDFTFPDSIRNLNFGAVSVVLPMIGVQIYTNGDFLIDLGFPYNMDFSRSFSISAI
                     VYGVPVLGSGGVYFGKLSNATATQVPKTQLGTFNPVIVIGIGLQLGLGYNFTKGPLSA
                     GFALTVFGIVEGVFATYHPYQPTDGSATNLQDVNYF"
     gene            complement(3418..4857)
                     /locus_tag="VHX39_06330"
     CDS             complement(3418..4857)
                     /locus_tag="VHX39_06330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990770.1"
                     /translation="MTNILYWNVRQFSINLINSPDNNVIPGLGGVTYTGASHQRLGLI
                     VNVIAAAAADIVTIVETQTGSRVPGDLATDSGGLQASRLLLQVLRFIFPAQGWRMVPP
                     LWLGTRWGAARPARTETVTVLYRGTTGNVTRYFTGPNFWSGGVGGISVDPVAAPGVPA
                     AYPNPIDTYLQPARAIPAASLYRPNVQEDQSAARIKYLDQVRRAGLRQNTRRRLQDVE
                     RYGGFRPPYMTSFFEQDLVAGTARTLTVFSIHSPPKAGPAKTLMRYFSQTPEILAAPG
                     LGEIKILCGDFNLDFLNAAGTYTNIYNPVTGIGYQSQMPTNLVPPAAGGDALRAYRGY
                     FATHLRDQPPPANFAATAFLWSIGGTNATYPGYGYPSTGSTASIDNILVRPAVAYPFT
                     VLNLVTGTPYVASALLTAPNPVVPVPLGAVVMGTGFAAAPAGAPAGPWPLEPTAAIYN
                     HPNALMLCAWPNYNKVYGTSDHLPLVTTL"
     gene            complement(4868..8500)
                     /locus_tag="VHX39_06335"
     CDS             complement(4868..8500)
                     /locus_tag="VHX39_06335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990771.1"
                     /translation="MAAGFTFVATSAKSAYSLYEADYQADTYWSGYLLPPQTGAPPES
                     ISYTDSLRSVLNKGSYTAAYAGSFLFAPTRPPDTANFIDGVVSYLQSQKLIAGSQTVL
                     WIPTVDPLSFGQPFAAYCIVFTCNGQNGRFIASGNWNAQIGQNFTFNILLNATLQIAP
                     SGDRIQFSVPPLSQGISFARGHTNLGIVVTGDATGLSAYLPFTGNSAGCCLFAATIQP
                     AVTFAAGGLPFGFFYSALDTSGGGTQTDNFYYPAFSIADLPASLACIGTVDVLDPFNQ
                     AMPATVLQAGGLRTGFVLPGGAALQSCLRNVPGNQIGLLPLGGVAVVPAEIPRQAGAL
                     ALTTGATVPGNPASAVPALTLTGQFAVSAAQQAAGATVQLLCGLYGSEFISLTSYDPS
                     AGGNDALLFYLASPAFAPVFPFVVATLNAPSSGNVVTPLTPAASTAWVTVVQGAATAP
                     TYHAEPAGSPQFGFPADIGGAAIVLQSRPPALPVPQGVAHAFPMVPYAGISATTPPGP
                     TLASFESSILAATRKQIISGGAQQTWAARSSALTLSRARRRAAEPGVAADPPPGTAYV
                     STPQGLIATVDTASGAYLSVALGQTVSDAGTALPFVFNHPTIALQDALQTNQLFLVVV
                     NPANLVDVPADFENAVEIAGWSMAAEVGVGVSATQYANVMILKYCSGSFKDRIANPNQ
                     WTAQADFSLPAGTDPNSDLAGVSYTGLSSWLQGVVKTAEIAVAANPGSPYANFVNLVN
                     DPAWNGVLVLQASLDANSLPAGLAGIVAGIDLTRFVAHHFGFTASRVSVNASNTITFN
                     GNSSTFGLVDYINPTFAANLAMGLPPDTPITLPIADNYAFSVLQLQVLFDNAAIKSFV
                     SYIELGADALFQTLVLSTTFNGTRMPSNGVVLDGSYIDQNGTGIYIFVQALPTVFALD
                     SNVLRAVAFNRVQFNSLGTIDDGATMLNRFLVWGHFDFTALTDGLDQPLDILSFGDPN
                     AVPGQTPSGSGLSFSNLLIDMTYPRTTPNAVTFVENTQNLSYDLPDSQSRDGSLFKGF
                     ALQLSGFIAATGNERPADYGYLTVGTSINATSLGNPWYGVTYNVTMGGPGALASAAGF
                     NSSLLLAWSPASAADDKQYAVFTGLSLPGAAPGAKLLSLQGVFKVSVDSITLSLQTVP
                     DEAATYYCLRLANIGLKILGIKKLPSDSSINFFLFGDPGGTGSLGWYAAYNATAPQAA
                     LPPPGP"
     gene            complement(8613..8876)
                     /locus_tag="VHX39_06340"
     CDS             complement(8613..8876)
                     /locus_tag="VHX39_06340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990772.1"
                     /translation="MTSTSATVAFQIQPTDSAYWTPTVTTAFVSVSNPTAKGTGVVMF
                     DVGLTVTLNPQQGGGFVVLVSGPITDSGSTYNLQGQVVGTYTG"
     gene            complement(9140..9640)
                     /locus_tag="VHX39_06345"
     CDS             complement(9140..9640)
                     /locus_tag="VHX39_06345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990773.1"
                     /translation="MIDWVIPCRPAGRAPSGPGRRGCGWTQYSTVTVLTIALLSASVV
                     PAWAAPDQAAPPAAKSCGQPQTTVLTPDSDALVSSVGNANDALTIALRIRGITHWTAL
                     LSTANVDIASPADQGNAVVTFKAGLGLHLTANGAAGFNVFLTGTIIDDGVTYDLKGAY
                     LGNFSC"
     gene            complement(9818..10789)
                     /locus_tag="VHX39_06350"
     CDS             complement(9818..10789)
                     /locus_tag="VHX39_06350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlxA family transcriptional regulator"
                     /protein_id="HEX3990774.1"
                     /translation="MTPNPRRIDFLAYADVQLLDVTGPFQVFASANRLADETGQSRPY
                     QLQVVSADPGPIESSSGLALVAQPLPPADQPLDTLVIAGGIGVNRVRADPDLVAWVRA
                     RAGVTRRVTSVCSGAFLLAATGLLDGRRATTHWSRCAELAAAFPAVRVEDDPIFVNDG
                     AIWTSAGVTAGIDMALALVEADLGRSVATSVARYLVVFAKRPGGQAQFSAGLALAGSD
                     GTFDDLHDWMKRNLRGNLAVPALAEQAGMSERTFLRHYRQVTGVTPARAVERVRVEAA
                     RQALGESGLPVKRIARDCGFGSEETMRRSFLRILAVPPHAYRERFPV"
     gene            10865..11542
                     /locus_tag="VHX39_06355"
     CDS             10865..11542
                     /locus_tag="VHX39_06355"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HEX3990775.1"
                     /translation="MIQIGLLAFPAMTQLDMTGPLQVFAGLPDAEIHVLWKTLDPIKA
                     HGGLTLLPDTTLADCPKLDVICVPGGAGVLDLMEDPEVLSFLRTQAAEATFVGSICTG
                     ALVLGAAGLLRGRKATTHWAWIDLLAPLGAIPTQGRVVRDGKFMTGGGVTAGIDFALT
                     MVSEIAGRDVAESIQLGIEYAPAPPFDSGSPDTARPEILAAVRTRMTSTRVEREARVA
                     KVAAAMP"
     gene            complement(11608..12201)
                     /gene="recR"
                     /locus_tag="VHX39_06360"
     CDS             complement(11608..12201)
                     /gene="recR"
                     /locus_tag="VHX39_06360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010500692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HEX3990776.1"
                     /translation="MGGPEVDRLIGLLAKLPGLGPRSARRAALKMLQQPEARMLPLAA
                     ALTEAAGAVRPCADCGNIDSQDPCSICADEHRDRSIICVVEGVGDLWALERARVHHGL
                     YHVLGGTLSAMSGIGPEDLTVPGLLHRIGEGGVAEVILALGATVDGAATAHWLTDQLR
                     PTGVVVTRVGQGVPMGGALDVLDDGTLAAALRTRRGV"
BASE COUNT         2354 a         3776 c         4009 g         2091 t
ORIGIN      
        1 aaaaatagtt gacatcctgc agattggtcg cgctgccgtc ggtcggctgg taaggatgat
       61 aggtggcgaa cacgccctcg acgatgccga acacggtcaa cgcgaagccg gccgacagcg
      121 ggcccttggt gaaattatag ccaagcccca gttgcaggcc gatgccgatg acgatgacgg
      181 gattgaaggt gcccagttgc gtcttcggga cctgcgtcgc ggtggcgttc gacagcttgc
      241 cgaaatagac tccgcccgac cccagcaccg ggacgccgta gacgatcgcc gaaatactga
      301 acgagcgtga gaaatccatg ttgtagggaa agccgaggtc gatcaggaaa tcgccgttcg
      361 tgtagatctg aacgccgatc atcggcagca cgacactgac cgcgccgaaa ttcaggttgc
      421 ggatgctgtc ggggaaggtg aagtcgatct ggaacaagcc gacgtcatcg gtgattttct
      481 tgtacaggat gtcgatgacg aagccggcga gcccgcctgt cttttcgccg ttcagcgcca
      541 gacgcatccc gtagagatcg gggtcgttga acaccagttg cacatcgacg gcccagatgt
      601 ccccgacctt cagcacattg aagtgcagcg cgatcagcca gttgctttcg gcattgtaat
      661 agggttgccc ggtggtcgta ttgttgggaa ccaccggatt ctgggtgccc ttggtctgcg
      721 gcacgccggc cagcgcggta atcgccgcct gcgtcgaggt gaagtccttg tacccctgga
      781 tgcctacgcg ctgaccaagg gcgagaaggt tcagcttgaa atactcgttg ccctgccccg
      841 gcacgtccgg catgtcctga accgactgcc cttccggctt cagcaggttg ccgagcgaac
      901 cctccagccc cggcggcgcg gacccgtcga tcgagagcat gaccttgccg ggggacgtgc
      961 cgtcggcggg ggtgcgggtg agggagatgc ctttgatcgt gatgaagccg agatcgagtg
     1021 gcgagctgag ggtatagctg ccagtcagcg taatcggctt gtcgttggac agcgacacgg
     1081 tgatcgacag gccatcgagc gaaatctggt tcagcaggct ccacggcgct ggcagcgaga
     1141 agttgggctc gaacaacgtc gaaaccaggc tttcgatcag cgtgccgatc gaccagcctt
     1201 tgagcgtaaa ggtgacggtt tcctgcgcgc tggcgtaggt cgcggtgaaa ccttgccagg
     1261 tcacgaacag ggtctgattg ccgtccgcct caaacgtgta gccgaaaccg agagaaagat
     1321 tgatgggcgt atagagccag gtgccgctgg cgctgccgga gaacgcggtg ccgtcgtagg
     1381 acaggtcgat ggcggcatcc ttgatgccaa ccgactgatc gccgaagctg aacacccagt
     1441 cgaacgttgt gctgacggta taggtgtttt tggcggtgtt gtcgtccggg atgaagcagg
     1501 tcgccccgag cgaggtgatg gtcaaactgc cgagcaggaa actcggaaag acgtaaccgg
     1561 tcgtggtgac gaagaactgg gcgatcagcg cgctgacatc gaccggttcg gcgaggtcgg
     1621 cggccagggt ccagccggca tcgtcgccgc cgccgacata ggcgacgctg acattgacat
     1681 cgaggccgca aatcgtgacg agaccgccta tgctgccgga ccagaccgtt ccgctgccgg
     1741 tttgcaactg cgtgccggaa ttgctgctgg cgctcaccgc ggacagcgtg atgagacccc
     1801 cggaaacggc gaaaatgtcg gtgccgtcga ttttgaggaa cggaaaatcg acggtgacgc
     1861 cggacgaaaa tacgaaggtc tgggaattat agtcgagttg cagcgagata tcggaaaccg
     1921 tgatcccaac cgggatcgag gcgggggacg atatcagtcc gccggagacg acggcgagga
     1981 agtcggcgag cgacgcggag ccatcgaaac tggcgatgaa aacctggtcc gacgtgaaca
     2041 cgacggtaaa caccccgccg gggctgccat cgggtttcct gaacaccgtg ggcagaatgg
     2101 aaaaactggt gctgaacagg tagctgaagg ttgccttggt aaacggattg ctgacggacc
     2161 agtccagcgc gaaactctga accgtaaacg cgaagtccgg tgtcggcgcg ggcagcggct
     2221 gccagttcag atcgtggccc ggcgcagtgc cgagcttgac ggtgacctgg ttgacgctga
     2281 cggatgaggc agcgagcgtt ccgctcaatg tcatgcccgc cagcccgaac gatgtcaggt
     2341 attgctgcag gaatgtcggt gtgccatcga aatagctgcc cttcccgcca ataagttcga
     2401 tggcggacgc gggaccgagg agctgtgcgg tttgcggcgt gagagccacg gcataggtga
     2461 ttgccggccc ggtggtggcc ggcgccacct ccacctccag cgtgtaggcc ccggccgaca
     2521 cgccttgcag cagaagatcg gtggcaaacg ccaaggtggc gtattgggcg aagttctgct
     2581 tggagatgtc gtcatcactg ggctgcggga tgctgatcga cagcgtcggg cggctgacgg
     2641 tgaggtatgt cgcgaacgtg tactgggccg tgctcagcag cgccgtaaac gtgccggacg
     2701 gcaatatcgt tccggttgtg aaatccgggc cgccatagct cgacagatcg aacgtgccgg
     2761 aaaaatcgag cggggcgctg ggcgcgagca agccggcgaa caaagcgaga taggcgttgg
     2821 cgggttgcgg gaaggcgatt ttcgccagca gcgtctgctt cgggccggcg accaccggga
     2881 cgccggcggg ttgagcccag ggataggcgc cggtggccgt cgaaaaatag aattgagccg
     2941 cggtgaccgg catgatgttg aacggatagc cggtcgcgta cgggaagctg ttggtccagg
     3001 tccacgcgcc gggtgcggag gcgatctgca caaccagcac cacgccgccg cttccgtccg
     3061 atgtcgtcgt gaacagcaag gtggccgatg ccgtcccatt gccgttgatc accggaacct
     3121 gcgcgccggt gacgatgaac tggccgttga cgacgggacc cacgccgccg gcactgccgg
     3181 tgacggtgaa cgcggtggcg gccacctgga aggccttgcc gagatcggtg tcgtaagtgg
     3241 ccggcacggt cacgcccggg tcgttgagac ccgaggtcag aaacgcggaa tccagcgcga
     3301 agccactcgg accggcgatg gcgctcgcga tggcggctcg caagttggct agggcggtgg
     3361 ccgggtctgc catgggcgtt atggcctttc aggtttagcg gcggcttcga tgcagcctca
     3421 aagggtcgta acgagaggca agtggtcgct tgtgccgtag accttgttgt agttgggcca
     3481 ggcgcagagc atcagggcat ttggatgatt gtagatcgcg gcggtcggtt ccagcggcca
     3541 gggtccggca ggggcaccgg cgggcgcggc ggcgaagccc gtccccatca ccacagcccc
     3601 gagcggaacc gggacaacgg ggtttggcgc ggtcaacagg gcggaggcca catagggcgt
     3661 cccggtgacc aggttcagca ccgtgaaggg ataagccacg gcgggtcgga cgaggatatt
     3721 gtcgatcgat gccgtgctgc ctgtgctggg ataaccataa ccggggtagg tggcattggt
     3781 cccgccgatg gaccacagga aggcggtggc agcaaaattt gccggcggcg gctgatccct
     3841 taaatgcgtt gcgaaataac cgcgatacgc gcgcaacgcg tcgccgcccg ccgccggagg
     3901 caccaggttc gtcggcatct gcgactggta gccgatcccc gtcaccgggt tgtagatgtt
     3961 cgtataggtt cccgccgcgt tcaggaaatc gagattgaaa tcgccgcaaa ggatttttat
     4021 ttcgccgagt ccgggcgccg cgaggatttc cggtgtctga gagaaatacc gcatcagcgt
     4081 cttcgccgga cccgccttgg gtggcgaatg aatggagaag acggttagcg ttcgagccgt
     4141 acccgcaacc agatcctgct cgaagaagct ggtcatgtat ggcgggcgga atccaccgta
     4201 gcgctcgaca tcttgcagcc gacgccttgt gttctgtcgt aatcccgccc gccgtacctg
     4261 atcgaggtat ttgatgcgtg ccgcggactg atcttcctga acgttcgggc ggtacagcga
     4321 cgcagcgggt atcgcgcgtg ccggttgaag atacgtatcg atcggatttg ggtaggcggc
     4381 gggcacaccc ggcgcggcga cgggatcgac cgatatgcca cccacgccgc ccgaccagaa
     4441 attggggccg gtgaagtaac gcgtcacgtt gccggtggtt ccgcgataca gcacggtcac
     4501 ggtttccgtt ctcgccggac gagccgcccc ccatcgtgtt cccagccaga gcggcggcac
     4561 catgcgccag ccctgcgcag ggaaaatgaa acgcaatacc tgcagaagaa ggcgcgacgc
     4621 ctgtaggccg ccggagtcgg tcgccagatc gccgggtacc cggctaccgg tctgcgtttc
     4681 gacaatcgtg acgatgtcgg cggccgcggc ggcgatgacg tttacaataa ggcccaggcg
     4741 ctggtgcgag gcgcccgtat aggtcacacc accaagtccc ggaataacgt tattgtccgg
     4801 actgttaatc aaatttatgg agaactgcct gacattccag taaagaatat tggtcatgcc
     4861 cgcatcctca tggcccgggt ggcggaagtg ctgcctgcgg agcagtcgca ttataggcag
     4921 cgtaccaacc caggctgccc gtgccgccgg gatcgccgaa cagaaagaaa ttgatcgacg
     4981 aatccgacgg aagctttttg atgcccagga ttttcaggcc gatattggcg aggcgcaggc
     5041 agtaatacgt cgccgcctcg tccggaacgg tctgcagcga caacgtgatg ctgtcgaccg
     5101 aaaccttgaa caccccctgc aaactcagaa gcttcgcccc aggcgccgca ccgggcagcg
     5161 acagtccggt aaatacagca tattgcttgt cgtcggccgc actcgccggc gaccacgcca
     5221 gcagcagcga cgaattgaac cccgccgccg aagccagcgc acccggcccg cccatggtga
     5281 cgttgtaggt tacaccgtac cagggattgc cgagcgaggt ggcattgatc gatgtgccga
     5341 cggtgaggta gccgtaatcc gccggacgct cgtttccggt cgcggcgatg aagccgctga
     5401 gctgcagggc aaaccccttg aacaggctgc cgtcgcgcga ttggctgtcc ggcaggtcat
     5461 aggacaggtt ttgcgtgttc tcgacgaacg tgacggcgtt gggcgtggtc cgcggatacg
     5521 tcatgtcgat cagcagattg gagaaactca gaccgctgcc ggatggcgtc tgcccaggca
     5581 cagcattcgg gtcgccaaag gaaagaatat cgagcggctg gtccagccca tcggtcaacg
     5641 cggtaaaatc gaaatgcccc cagaccagga agcgattgag catggtggcg ccgtcatcga
     5701 tcgttcccag gctgttgaac tgcacccgat tgaaggcgac cgcacgcagc acattgctgt
     5761 cgagcgcgaa aaccgtcggc agcgcctgca cgaaaatgta gatgccggtg ccgttctggt
     5821 cgatataact gccgtccagg accaccccgt tgctcggcat gcgcgtgccg ttgaatgtcg
     5881 tgctcagcac aagggtctgg aacaacgcat cggcacccag ctcgatatag ctgacgaacg
     5941 acttgatcgc cgcgttgtcg aacagcacct gcaactggag caccgagaac gcataattgt
     6001 cggcgatcgg cagcgtgatc ggggtgtccg gcggcaggcc catcgccagg ttggcggcga
     6061 acgtggggtt gatgtagtcc accaggccaa acgtgctcga attgccgttg aacgtaatgg
     6121 tgttgctggc gttgacggac acgcggctgg cggtgaagcc gaaatgatgc gcgacgaacc
     6181 gggtgaggtc gataccggcg acgatccctg ccaggcccgc cggcaggctg ttggcatcga
     6241 gactggcctg caacaccaga accccgttcc aggcggggtc gttgaccagg ttgacgaagt
     6301 tggcatacgg cgaacccggg tttgccgcga cggcgatctc ggcggtctta acgacaccct
     6361 gtagccagct cgacaaaccg gtgtagctga ccccggccag gtcggagttg ggatcggtgc
     6421 ccgcggggag tgagaagtcc gcctgcgcgg tccactggtt cgggttggcg atgcggtcct
     6481 tgaagctgcc gctgcagtac ttcaagatca tgacgttggc gtactgggtg gccgagacgc
     6541 cgacaccgac ctcggcggcc atggaccacc ccgcgatctc caccgcgttc tcgaaatccg
     6601 ccggcacgtc gaccaggttg gccgggttga cgacgaccag aaacaactga ttggtctgca
     6661 gcgcgtcctg cagggcgatg gtgggatgat tgaagacgaa cggcagtgcc gtcccggcgt
     6721 cggaaacggt ttgccccagc gcgaccgaga gataggcacc gctcgcggtg tccaccgtgg
     6781 cgatcaggcc ctgcggcgtg ctgacatagg ccgtcccggg cggcgggtcg gctgccacgc
     6841 cgggttcagc cgcacggcgg cgcgcgcgcg acagggtgag ggcgctgctg cgcgccgccc
     6901 aggtctgctg ggcaccgccg gagatgatct gcttgcgtgt ggccgccagg atgctgcttt
     6961 cgaagctggc gagcgtcggg ccgggtggcg tcgtggcgct gatcccggca tacggcacca
     7021 tcgggaaggc gtgtgccaca ccctgcggca ccggcagcgc gggcggccgc gattgcagga
     7081 cgatcgccgc gccgccgata tcggcgggga agccgaattg cgggctgccg gccggttcgg
     7141 cgtggtaggt cggcgccgtg gcagcccctt gcaccaccgt gacccaggcc gtgctcgcag
     7201 ccggcgtcag cggggtcacg acattgccgg aactcggtgc gttcagcgtc gcgacgacga
     7261 agggaaacac cggcgcgaag gcgggcgacg cgaggtagaa caacagcgca tcgttcccgc
     7321 cggcactggg gtcgtagctg gtcagcgaga tgaattcgga cccatagaga ccgcacagaa
     7381 gctgcacggt cgcgccggcc gcctgttgcg cggccgagac ggcaaactga cccgtcagcg
     7441 tcagcgccgg caccgcactc gccggattgc ccggcaccgt ggctccggtc gtcagcgcca
     7501 aggcgccggc ttgccggggg atttccgccg gcacgacggc gaccccgccc aacggcagca
     7561 agccgatctg gttgcccggc acgttgcgca ggcatgactg caacgccgcc cctcccggta
     7621 gcacgaaacc ggtgcgcagt ccgccggctt gcagcaccgt tgccggcatc gcctgattga
     7681 acgggtccag cacgtcgacg gtgccgatgc aggcgagcga cgccggcaga tcggcgatac
     7741 tgaacgccgg gtagtaaaag ttgtcggtct gcgtgccgcc gcccgaggtg tcgagcgcgc
     7801 tatagaagaa accgaacggc aggcctccgg cggcgaatgt gaccgcgggc tgaatggtgg
     7861 ccgcgaacag gcagcagccc gcactgttgc cggtgaacgg caggtaggcg ctcaggccgg
     7921 tggcgtcgcc ggtcaccacg atcccgagat tggtgtggcc gcgggcgaaa ctgatcccct
     7981 ggctcaaggg cggcaccgag aactgaatgc ggtcgcctga gggtgcgatt tgcagggtcg
     8041 cgttcagcag aatgttgaag gtgaaattct gcccgatctg ggcattccag ttgccggacg
     8101 cgataaacct gccgttttgc ccgttgcatg tgaaaacaat gcaataggcg gcgaacggct
     8161 gaccaaagct gagtggatcg accgtgggga tccacaggac ggtctggctg ccggcgatca
     8221 gcttctgact ttgaagatac gatacaacgc cgtcgatgaa attcgccgtg tcgggcggac
     8281 gcgtgggtgc gaacagaaac gagccagcat aagcggctgt atacgagcct ttatttaaaa
     8341 cggagcgaag cgagtcagta taactgatcg attccggcgg cgcgccggtt tggggtggga
     8401 gcagataacc cgaccaatat gtatcggcct ggtaatcggc ttcgtataaa ctataggcgc
     8461 tcttcgcact ggtcgcgacg aaggtgaagc cggccgccat gggcaccgcc tttcctgacc
     8521 gaagcgcgcc gtcgccatca ctgtcgacgt caggctgtta taggagcgac cggacacagg
     8581 ccggcatgac ctgtgtccag caagccgtgg cgttagccgg tgtaggtgcc gacgacctga
     8641 ccctgcaggt tataggtcga gccggagtcc gtgatcgggc cggagaccag gacaacaaag
     8701 ccgccgcctt gctgaggatt cagcgtcacc gtcaagccga catcaaacat caccacgccg
     8761 gtgcctttgg cggttgggtt cgatacagat acgaaagccg tcgtgaccgt cggtgtccaa
     8821 taggcgctgt ctgtgggctg gatttggaat gccaccgtcg ctgacgtgct tgtcatggtg
     8881 caaacacttt ggctgttcgg tgtaagctgc gttgttgttg gtccgctgcc tgacataggt
     8941 ccccctccga gattttgtga cgcggccgca acctgactag cgacacgggg caagtcaagc
     9001 acgatttcaa agattctttg taagaaatgt tatatcgtgg acttcagtcg aattatgatt
     9061 gcgatctgcg gaacaaaaaa tgtctgtgag acatttgtac atttttgcac gcgacatacg
     9121 gccgcgggca gagccggcct cagcaactga agttgccgag gtaggcgccc ttcaggtcat
     9181 aggtcacgcc gtcgtcgata atcgtgccgg tcaggaacac gttgaacccc gccgcgccgt
     9241 ttgcggtcag gtgcaggccc agacccgcct tgaatgtgac aaccgcgttg ccttggtcgg
     9301 ccggcgaggc aatatcgaca ttggcggtcg acagcagcgc ggtccaatgc gttatgccgc
     9361 gaatgcgcag cgcaatggtc agcgcgtcgt tggcgttgcc gacgctggaa acaagcgcgt
     9421 cgctgtcggg cgtcaggacg gtcgtttgcg gttggccgca gcttttggcg gccggtggtg
     9481 cggcttgatc cggcgccgcc caggcgggta cgacagaagc tgaaagcagc gcgatcgtta
     9541 gcaccgtgac cgtactatac tgcgtccagc cacagcctcg ccggccaggc ccagacggcg
     9601 cacggccggc cggccggcaa ggaatgaccc agtcaatcat gcagtccgga acgccagcac
     9661 gttgctctcc agtcctaatg ctcctttgac tatctatgtt tacagtcgga tttggatgtc
     9721 aagtatcaaa catatcgtcg cagacggcgt atccggccat agcgacggat gccgctgccc
     9781 gcatcaggtc attcgatccg ccgggccggc atgatggtca gaccggaaac cgttcccgat
     9841 acgcatgcgg cggcaccgcg aggatgcgca agaaactgcg ccgcatggtt tcctccgatc
     9901 cgaacccgca atcccgagca atccgcttta ccggcaagcc ggattccccc agcgcctggc
     9961 gcgccgcctc cacccgcacc cgttcgaccg cgcgcgccgg cgtcaccccc gttacctgcc
    10021 ggtaatgccg caggaacgtc cgctcgctca tgcccgcctg ttccgccagc gccggcaccg
    10081 ccagattgcc gcgcaggttt cgtttcatcc agtcgtgcaa gtcgtcaaac gtcccatccg
    10141 accctgccag cgccagcccc gcactgaact gagcctgccc gcccggtcgt ttcgcgaaca
    10201 ccacaaggta gcgcgccacc gaggtcgcca cggaacgccc gaggtccgcc tccaccagag
    10261 ccagcgccat gtcgatcccc gccgtcaccc cggccgaggt ccagatcgcg ccgtcattga
    10321 cgaagatcgg atcgtcctcc acccgcaccg ccggaaatgc cgccgccagt tcggcgcagc
    10381 gcgaccaatg ggtggtcgcc cgccgcccgt cgagcaaccc ggtcgcggcc agcagaaacg
    10441 cacccgaaca caccgacgtc acccgacgtg tgacgccggc cctagcccgc acccaggcaa
    10501 ccaaatccgg gtccgctcgg acgcggttga cgccgatacc gccggcgatg accaacgtgt
    10561 ccaatggctg gtccgccggc ggcaacggct gcgccaccag cgccagcccc gaggacgact
    10621 cgatcggccc gggatcggcc gacaccacct gcaattggta cggccgcgac tggccggttt
    10681 cgtccgccag gcggttggcg ctggcgaaca cctggaacgg accggtcacg tccaacagtt
    10741 gaacgtcggc gtaggccaga aaatcgatcc ggcgcggatt tggcgtcatt tgtggctcat
    10801 ttggcatttc cgccaaaccc tgccatgcca cactccgcct gtccacaaac agaagggact
    10861 gaaaatgatc caaatcggcc tgctcgcctt cccggccatg acccaactgg acatgaccgg
    10921 cccattgcaa gtgttcgccg gccttccgga cgctgaaatc catgtgctgt ggaagaccct
    10981 cgatccgatc aaggcgcatg gcggcctgac cctgctgccg gacaccacgc tggcggactg
    11041 cccgaaactg gacgtgatct gcgtccccgg cggcgccggc gtgctggatc tgatggagga
    11101 tcccgaggtt ctgtccttcc tgcgcaccca ggcggccgag gcgacgttcg tcgggtcgat
    11161 ctgcaccggc gcgctggtgc tgggcgcggc gggcctgctg cgcggcagga aagcaacgac
    11221 gcattgggcc tggatcgatc tgctggcgcc gttgggcgcc atccccaccc agggccgggt
    11281 ggtgcgcgac ggcaagttca tgaccggcgg cggcgtcacc gccgggatcg attttgccct
    11341 gaccatggtt tccgaaattg ccggccgcga cgtcgccgaa agcatccagc tcgggatcga
    11401 atacgcccct gccccgccat tcgactcagg cagtccggac accgcccgcc ccgaaatcct
    11461 ggccgccgtc cggacccgca tgacaagcac ccgggtagaa cgcgaagcca gggttgcgaa
    11521 agtcgcggcg gcaatgccgt agccacaaca cccgggccca aagtggactg atcgctttgg
    11581 gccggaactg ccgtttaccc gggtccgcta aacccctcgc cgcgtccgca acgccgccgc
    11641 cagcgtcccg tcatccagca cgtccagcgc gccgcccatc ggcacccctt gcccaacccg
    11701 ggtcacgaca acgcctgtgg gccgcaactg gtcggtcagc cagtgcgccg tggccgcgcc
    11761 atcgaccgtc gcgcccagtg ccaggatcac ctccgccacg ccgccttcgc cgatccggtg
    11821 gagcaggccg ggtaccgtca ggtcctccgg cccgataccg gacatcgcgg acaaagtccc
    11881 gcccaataca tggtacaggc cgtgatgcac acgagcccgc tccagcgccc acaggtcgcc
    11941 gaccccttcg accacacaga tgatcgaccg gtcacgatgc tcgtccgcac agatcgagca
    12001 tgggtcctgg ctgtcgatat tgccgcaatc ggcgcagggc cgcacggcgc cggccgcctc
    12061 ggtcaacgcg gcggcaagcg gcagcatgcg cgcctccggc tgttgcagca tcttcaacgc
    12121 cgcccgccgg gcactgcgtg gacccaggcc cggcaacttg gccaacaatc cgatcagacg
    12181 atcgacttca ggaccgccca cgccgttcgc ccttcttcgt cacaaccggt
//
LOCUS       DATAVD010000341         7957 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_404051, whole genome shotgun sequence.
ACCESSION   DATAVD010000341 DATAVD010000000
VERSION     DATAVD010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7957
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404051"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..747)
                     /locus_tag="VHX39_06365"
     CDS             complement(<1..747)
                     /locus_tag="VHX39_06365"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3990777.1"
                     /translation="MFRVALLDDYQDVALRMADWGRLAGRADVEAIHEHIPDIERLAE
                     RLLPFDAVMMVRERTKFPRALFERLPNLKLLITAAMWNVAIDLDAATDHGVQVTGTGD
                     WSFATAELALGLMIALSRHITHEDRAMRAGLWQTRLGAGLHGKTLGVLGLGSLGGQMA
                     RFGRMMGMEVLAWSQNLTPEAAAAGGAHYVPKDELLARSDFISIHLKLSDRTRGLLGG
                     RELGLMKPTGYLINTSRGPIVDEAAMLAALR"
     gene            complement(765..2651)
                     /locus_tag="VHX39_06370"
     CDS             complement(765..2651)
                     /locus_tag="VHX39_06370"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3990778.1"
                     /translation="MSFYAVQIFNGLVNGGFIALMSLGLSIVFGMMRVVNFAHGAMYM
                     LGAFVAFIGGQFFGVSLWLALILAWVLVGGFGVILERLLLSRLYRLDPAYNLLLTFGL
                     TLIIEDLMRSFFATTGGQFLVPHVLSGAVNLGFTYYPRYRLFVLMVSVLVCLAAWFVL
                     ERTRAGALVRAATERPDLLKCFGGNVPRLISGTFFCAAGLAGLAGALAAPIRSISPFM
                     GQEMIALTFAVVVAGGMGSIAGSVLMGFIVGVVSALAAIWYPPVAVAITYIIMLVVLV
                     VRPGGIFRGVDISNFPLHYTPMTERARRIFLSPRLSLAALAVAAVLPWVIYPVVATDI
                     ILWGLCALGFDLLFAFAGLLSFGQAAYWGAAAYITGVLVSHFGFPGWSGFLLGVVGST
                     TIGVVFGFIIAQKKGIYFSMITFAFAEIVYFVVNQFATYTGGEDGLHDVLRGSLFGIS
                     LADDRVFYYLALFFVALMVAFVFRILKSPYGMSLVGARENERRMLSVGYNVYLIRVQA
                     YALSAFIISVAGALYVLNHQFISLEAVYWRASGEPVMMTLLGGAGTIFGPFVGAGVVL
                     LMRNTLSTITDSGSLVLGCLFVVIVMVFRRGILGELVHHLAHRGHDNSSVAATDAERV
                     PSGR"
     gene            complement(2688..3800)
                     /locus_tag="VHX39_06375"
     CDS             complement(2688..3800)
                     /locus_tag="VHX39_06375"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990779.1"
                     /translation="MITDLSTVFSDTSGKGSVDGVKMAVDDFGGSVNGVPINVIVLDN
                     KLDVALTINKTREIIDSQGVNLITDVTSSAAAIAVAKLANERKITTTFVSPGTTALTN
                     EDCSKYTWHYAWDTTAMATAAGRVTDEGFKKWYFITADYAFGHSLLEQFSKTVKAKGG
                     TVLGNDMVPFPNDDFSSYLLKAQSAGAQAIGILEAGQDLRNGVKQAREFGLLGNGKIQ
                     IVPGQMNFTDVRSTGIDTWSGITAGEIWYWNYDQQTRDWAARFKKRFGMIPASLYAGN
                     YSAVTQILNTVKKIGTDDPDKIAEALEGSKFSDFFARNATWRKKDHSVIHDMYVIKVK
                     KPNEVKQPEDYYDVVATIPGKDVFIPESESTCKHDW"
     gene            complement(3797..4018)
                     /locus_tag="VHX39_06380"
     CDS             complement(3797..4018)
                     /locus_tag="VHX39_06380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990780.1"
                     /translation="MNHNRKRMQNAFYKMLDNGPGPPQLRGNETTQVKGGIMRKTLLG
                     TVAAVLMAGMTLFNQPAEAAMIGKNSPSW"
     gene            4057..4842
                     /locus_tag="VHX39_06385"
     CDS             4057..4842
                     /locus_tag="VHX39_06385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008942935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3990781.1"
                     /translation="MGEATSTGLDGLGLEAVTKSFGGFIAVNDVTLDFPAGAIYGIIG
                     PNGAGKTTLFNLLSGFLKPTRGRLRHRGQDVTRLSPEAIARRGVVRSFQITSIFSNLT
                     VAENIVLPLQRRDRGGTGFLRKSNWGRRYGDEIDDILQRVHIPAEWRDRGASALPYGL
                     KRSLELGISLAANPDILLLDEPTAGMTVRDIVKVTELIGQLAVGRTVIVVEHNLGVIA
                     DLAQEIVVLQQGQLLTRGRYDDVRRDPRVIDAYLGTKGRHAHA"
     gene            4835..5527
                     /locus_tag="VHX39_06390"
     CDS             4835..5527
                     /locus_tag="VHX39_06390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3990782.1"
                     /translation="MLEIRGLDASYGETQVLRGISLDVAEGEIVTLIGRNGAGKSTTM
                     KAIMGDIPRRSGSIKFRGQEIIGLGAERICKLGIGYVPEDRGMFGTLSVLENLTIAKP
                     QNPSAWSLERIFGLFPVLNARAHQRATTLSGGEQQMLAIARPLYMGSSFLLLDEPTEG
                     LAPVIIDAIGQVVGQLKKAGLTVLLVEQNLPFATSVADRHNLMENGRIIRTMTNDDVI
                     REEGELLAHLGV"
     gene            5553..6227
                     /locus_tag="VHX39_06395"
     CDS             5553..6227
                     /locus_tag="VHX39_06395"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX3990783.1"
                     /translation="MSFATKQESVAEIIRERIIVGIYDRGTKLKQADLADELGVSITP
                     VREALLALEAEGYVRGLPHKGLMVPEIVPERLGEICDLRIALERDLTAAALDNMEPSG
                     LGKLLSLQRELEVALESDDLLKVRTANYRFHFCLYDMAERSQTLHFVRVLWAKYPFTL
                     QDLKQDRPRRMRSEHDLFLERVQQGDKRGAVEAMVRHIRNGWREITVRRGGGTVTNAM
                     AAEASP"
     gene            6291..7424
                     /locus_tag="VHX39_06400"
     CDS             6291..7424
                     /locus_tag="VHX39_06400"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3990784.1"
                     /translation="MAKKLMETQDQRPYSGVRIIDLTRELGSYCTRLFADLGAEVIRV
                     EPPQGRSDRLHPPFVADVGSIPFAFLNLNKKAVRVDTSTESGRGVFADLVGAAHVVVH
                     EPGATDVSLADVVAIPGARVVTSVSYFGLTGPYAGFAGCDLIAQALGGIAWLSGEPGK
                     PPLKLAGEQSVFVTSLYAAAATALALWDLEKTGTGHLLDVSSQEAIAHSLQNAPQVYD
                     LEGQVMSRGGEGVRDATEAAFACRDGYVFLAAPLSLSVSWNALLKWMQDEGFEGVDRL
                     LQDDWKDRPTRATAAMKAEFRPLFECFVASKTKAELSAEALKRKLVMAPVSRIADLQA
                     DPQLLFRQFFHTVPMPGLGKDVAFPGPPYRLSEPLWRIERAGG"
     gene            7434..>7957
                     /locus_tag="VHX39_06405"
     CDS             7434..>7957
                     /locus_tag="VHX39_06405"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3990785.1"
                     /translation="MFPQFLKGIRFVDLTWAGAGPFSTKLFSDYGAEVIKIESRSRPD
                     PVRVGGPYKDAIPGINRSGYFASRNTGKKSFAINLKAPASKAILFELIRDADVVSNNF
                     GPGAMERLGLGYDALKEIKPDIIYLSMPMYGEDGPLANLTGVGMTISAASGLMWQTGY
                     EGEGPLGPGTHFPD"
BASE COUNT         1628 a         2382 c         2473 g         1474 t
ORIGIN      
        1 gcggagcgcg gccagcatgg ccgcttcatc gacgatcggg ccgcgcgagg tgttgatgag
       61 atatcccgtc ggcttcatca accccagttc ccggcccccc agcaggcccc gtgtgcgatc
      121 ggacagtttc aaatggatcg aaatgaaatc cgaccgggca agcagctcgt ccttcggaac
      181 gtagtgggca ccgcccgcgg cagcggcttc gggtgtcaga ttctggctcc aggccagcac
      241 ctccatgccc atcatccggc caaaccgagc catttgaccg cccagggaac ctaggccgag
      301 cacgccgagg gttttgccat gcaggccagc cccgagtctt gtctgccaca gcccggctcg
      361 catcgcacgg tcttcatggg tgatgtggcg ggacagcgcg atcatcagcc ccaatgcgag
      421 ttcggcggtc gcaaaagacc agtcaccagt gccggtcacc tgcacaccgt ggtccgtcgc
      481 cgcgtccagg tcgatcgcca cattccacat cgcagcggtg atcaacagct tgaggttcgg
      541 caaccgctcg aacaaggcgc gcggaaattt agttcgctcc cgcaccatca tcaccgcatc
      601 gaacggaagc agccgttccg ccagccgttc tatatccgga atatgctcgt ggatcgcctc
      661 gacgtccgct cggcccgcca gccgtcccca gtccgccatg cgcagtgcga catcctggta
      721 gtcgtcgagc aacgcgacgc gaaacatggc gtgggtcttt cggttcagcg gccggagggg
      781 acgcgttcgg cgtcggtggc ggcgacgctg ctgttgtcgt ggccgcgatg cgccaggtgg
      841 tggaccagct cacccaggat gccgcggcgg aacaccatta cgatgacgac gaagaggcat
      901 cccagcacga ggctgccgct gtcggtgatc gtggacagcg tgtttcgcat cagcagaacg
      961 acaccggcgc caacgaaggg cccaaagatg gttccggcgc cgcccagcaa agtcatcatc
     1021 accggctcac ccgacgcgcg ccaatagacc gcttccaggc tgatgaactg atggttcagc
     1081 acatacagcg ccccggcgac gctgatgatg aatgccgaca gcgcataggc ctgcacgcgg
     1141 atgagataga cattgtagcc gacgctgagc atgcggcgtt cattctctcg tgcgcccaca
     1201 agcgacatgc catagggcga tttcaggatg cggaagacga atgccaccat cagcgcaacg
     1261 aaaaacaaag ccaggtagta gaatacccgg tcatccgcca ggctgatgcc gaacagcgat
     1321 ccgcggagca catcgtgcag cccgtcctcg ccgccggtgt aggtggcgaa ctggttgacg
     1381 acgaaataga cgatctcggc gaaggcgaag gtgatcatcg agaagtagat gcccttcttc
     1441 tgcgcgatga tgaagccgaa gaccacaccg atcgtggtgc tgccaaccac ccccagcagg
     1501 aacccggacc aacccggaaa gccgaagtgg ctgaccagca caccggtaat ataggccgcc
     1561 gcgccccagt aggcggcctg tccgaacgac agcaggccgg caaaggcaaa cagcaggtcg
     1621 aaccccaggg cgcacagccc ccacaggatg atatcggttg caacgacagg atagatgacc
     1681 cagggcagca ccgccgccac ggctagcgcc gcgagcgaaa gccgcggact gaggaagatg
     1741 cgccgtgccc gttccgtcat cggcgtgtag tgaagcggga agttggagat atcgacgccg
     1801 cggaagatgc caccgggccg caccaccagc acgaccagca tgatgatgta ggtgatggcg
     1861 acggcaaccg gcggatacca gatggcggcc agcgcggaca cgacgccgac gatgaagccc
     1921 atcagcaccg aaccggcgat ggatcccatg ccgccggcga caacaaccgc gaacgtcagc
     1981 gcgatcattt cctggcccat gaagggggag atgctgcgga tcggtgcggc cagggcccca
     2041 gccagccccg ccagcccggc agcacagaag aacgtgccgg agatcagccg aggaacgtta
     2101 ccaccgaaac atttcaacaa atccggccgt tccgtcgccg cccgcacgag cgcccccgct
     2161 cgggttcgtt ccagcacgaa ccacgcggcg aggcatacca ggaccgaaac catcagcacg
     2221 aacaaccggt atctcggata gtaggtgaac cccaggttga ccgcgcccga cagcacatgc
     2281 ggcaccagga attggccgcc ggtggtggcg aagaaactgc gcatcaaatc ttcgataatc
     2341 agcgtcaaac cgaaggtcag cagcagattg tacgccgggt ccagccgata cagccgggac
     2401 agcagcagcc gttccaggat caccccgaac ccgcccacca gaacccaggc gaggatcagc
     2461 gccagccata aggacacacc gaagaactgg ccgccgatga aggcaacgaa cgcccccaac
     2521 atatacatgg cgccatgcgc gaaattgacg acgcgcatca tgccgaagac gatgctgagg
     2581 ccgaggctca tcaaggcgat gaaaccgcca ttgacgagcc cgttgaagat ctggacggca
     2641 tagaaggaca tcgaagtctc ccgcggcgcc tgcctggcac gcgcgcctta ccaatcgtgc
     2701 ttgcaggtgc tttcggactc cggaatgaaa acatccttgc cggggatggt cgcgaccacg
     2761 tcgtaataat cttccggctg cttcacctcg ttcggcttct tcaccttgat cacgtacata
     2821 tcgtggatca cactgtggtc cttcttccgc caggtggcgt tgcgggcgaa gaagtcacta
     2881 aacttgctgc cctccagcgc ctcggcgatc ttgtccggat cgtcggtacc gatttttttg
     2941 acggtgttca ggatctgggt aaccgccgaa taattgccgg cgtacaggct ggcggggatc
     3001 atgccgaacc gcttcttgaa gcgtgcagcc cagtcccggg tctgctggtc atagttccag
     3061 taccagatct cgcctgcggt gatgccgctc caggtgtcaa tgccggtaga acgcacgtcg
     3121 gtaaagttca tctgaccggg aacgatctgg atcttgccgt tgccgagaag gccgaactcg
     3181 cgggcttgct tgacgccgtt acgaagatcc tggccggctt ccaggatgcc gatggcctgc
     3241 gctccggccg actgagcctt cagcagatag ctggagaagt catcgttcgg gaacggcacc
     3301 atatcgttgc ccaggacggt gccgcccttg gccttcacgg tcttgctgaa ctgttccagt
     3361 agggaatggc cgaaggcata atcagcggta atgaaatacc acttcttgaa accttcgtcg
     3421 gtcacgcggc cggcggcggt ggccatcgcc gtggtgtccc acgcataatg ccaggtatac
     3481 ttgctgcaat cctcattggt cagcgcggtc gtgccgggac tgacgaacgt cgtggtgatc
     3541 ttacgctcat tagccagctt ggcgaccgcg atggcggcgg cggagctcgt cacatcggta
     3601 atcaggttca cgccttggct gtcgatgatt tccctggtct tgttgatggt cagcgcgaca
     3661 tccagcttgt tgtccagtac gatgacatta atgggcacgc cattgactga tccgccgaaa
     3721 tcgtcgaccg ccatttttac gccatcgacc gatcccttgc cggaggtatc agaaaacacc
     3781 gtcgacagat cggtgatcac caggatggtg aatttttgcc aatcatggca gcctcggccg
     3841 gctgattgaa cagcgtcatg cccgccatca ggacggcggc gactgtcccg agaagtgttt
     3901 tccgcattat tccccccttg acctgggtag tttcgttgcc gcgaagctgt ggcgggcctg
     3961 gaccgttgtc aagcatttta taaaaagcat tttgcattct tttgcggttg tggttcactg
     4021 gcggggtatc gaacgcaggc cggaagaacg gaaaagatgg gggaagcgac aagcacgggg
     4081 ttggacggac tgggcctgga agcagtcacc aagtcgttcg gcggcttcat cgccgtcaac
     4141 gatgtgacgc tcgatttccc tgccggtgcg atctatggaa tcatcggccc gaacggtgcc
     4201 ggaaagacaa ccctgttcaa tctgctgagc ggtttcctta agccgaccag gggccggctg
     4261 cgtcatcgcg gccaggacgt tacccgcttg tcgcctgaag ccattgccag acgaggcgtg
     4321 gtgcgcagct ttcagatcac cagtatcttc agcaacctga cggtcgccga gaacatcgtg
     4381 ctgccgctgc aacgccgtga tcgtggcggc accggcttcc tgcgcaaaag caactgggga
     4441 cggcgttatg gggacgagat cgacgatatc ctgcagcgcg tccacattcc cgcggagtgg
     4501 cgcgaccgcg gcgcgagcgc cttgccctac ggcctgaagc gctcactgga attggggatc
     4561 agccttgcgg ccaaccccga catcctgctg ctggacgaac ccaccgccgg gatgaccgtt
     4621 cgcgatatcg tcaaggtcac cgaactgatc ggtcaactcg cggtgggccg cacggttatt
     4681 gtggtcgagc acaatctggg cgtgatcgca gacctggcgc aggaaatcgt cgtgctgcag
     4741 cagggccaac tgctaactcg cggtcgttac gatgacgtgc ggcgcgaccc cagggtgatc
     4801 gatgcctatc tgggcaccaa agggcgccac gcacatgctt gagattcgcg gcctcgacgc
     4861 atcctatggt gaaacgcaag tattgcgcgg cataagcctc gacgtcgcgg aaggggagat
     4921 cgtcacgttg attggccgca acggtgccgg caaatcgacc accatgaaag ccatcatggg
     4981 tgacattccg cgccgcagcg ggtcgatcaa gttcaggggc caggaaatca tcggcctggg
     5041 tgcggaacgt atttgcaagc tgggtatcgg ttacgtgccg gaagaccgcg gcatgttcgg
     5101 cacattgtcg gtgctggaga acctgacgat cgccaagccg cagaacccat cggcctggtc
     5161 gctggagcgg atcttcgggc tgtttcccgt tctgaatgcc cgagcgcacc agcgtgcaac
     5221 gactttgtcg gggggtgagc agcagatgct ggcgatcgct cggccgctct acatggggtc
     5281 gtcgttcctg ttgctggatg aaccgacgga aggcttagcg ccggtcatca tcgatgcgat
     5341 cggtcaggtg gtggggcaac tgaagaaagc cggactgacg gttttgctgg tggaacagaa
     5401 tctgccgttc gcgacatcgg tggctgatcg tcacaatctg atggaaaacg gccgtatcat
     5461 ccgcaccatg accaacgacg acgtaatccg ggaggagggc gaattgctcg cccatctcgg
     5521 tgtctgactc atttcgaaag ccggtgtagc ctatgtcgtt cgcgaccaag caggaaagtg
     5581 tagccgagat catccgcgaa cggatcattg tcggtatcta cgaccgaggc accaagttga
     5641 aacaggctga cctggccgat gaactcggcg tttcgatcac cccggtgcgt gaggctcttc
     5701 tggcgctgga agcggagggc tatgtgcgcg gcctgccgca caagggcctg atggtgccgg
     5761 agatcgtgcc cgaacgattg ggcgagatat gcgatttgcg aattgccttg gaacgtgacc
     5821 tgaccgcggc cgcactcgac aatatggaac cttccggtct ggggaaattg ctgtcgctcc
     5881 aacgcgagtt ggaggtggcg cttgaaagcg atgatctcct gaaggtacga acagcaaatt
     5941 accggtttca cttttgcctg tacgacatgg cggaacggtc gcagacgctg catttcgttc
     6001 gcgtgttgtg ggcgaaatat ccgtttacgt tgcaagattt gaagcaggat cgtcccaggc
     6061 gcatgcgatc ggaacacgat ctgttcctgg aacgtgtcca gcagggcgac aagcggggtg
     6121 ccgttgaagc catggtgcgg cacatccgaa acggctggcg ggagatcacg gtccgccgcg
     6181 gcggcgggac ggtaaccaat gccatggccg ccgaagcttc gccatgaacc tgcgccatcg
     6241 gggattgcga atgcctttta tatgatgcat tatctttgca gacacaaacg atggccaaaa
     6301 agcttatgga aacgcaggac caacgtccgt atagcggcgt gcgcatcatc gatctgacgc
     6361 gcgaactcgg gtcttattgc acacggctgt ttgccgatct cggggccgag gttatccgcg
     6421 tcgagccgcc acagggccgt tcagacaggc tgcatccacc gtttgtcgcg gatgtcggaa
     6481 gtattccctt cgcttttctg aatctgaaca aaaaagcggt gagggtcgat accagcaccg
     6541 aatccgggcg cggcgtgttc gccgatctcg tgggcgcggc acacgtcgtg gtgcatgaac
     6601 cgggggcaac cgacgtctcc ttggctgatg tcgttgcgat ccccggcgcg cgtgtcgtta
     6661 catccgtatc gtatttcggc ctgaccggcc cgtatgccgg gttcgccggc tgtgacctga
     6721 tcgcgcaggc gctgggcggc atcgcctggc tgtccggcga accgggcaag ccgccattga
     6781 aacttgccgg tgagcaaagc gtgttcgtca cctcgttgta tgccgcagcg gccaccgcgc
     6841 tggcgctgtg ggatctcgaa aagaccggca ccgggcacct gctggatgtt tcgtcgcagg
     6901 aagcgatcgc gcattcgttg cagaacgcgc cgcaggtcta cgacctggaa gggcaggtga
     6961 tgtcgcgcgg cggtgagggt gttcgtgatg cgaccgaagc cgcctttgct tgcagggacg
     7021 gctacgtgtt cctcgccgct ccgctgtcgt tgagcgtgtc gtggaacgcg ctgctgaagt
     7081 ggatgcagga cgaaggtttc gagggcgtgg accggttgct gcaggatgac tggaaggacc
     7141 gcccgacgcg ggcgaccgcg gcgatgaagg ccgaattccg gccgctgttc gaatgtttcg
     7201 ttgccagcaa gaccaaggcg gaactcagcg ccgaggcgct gaagcggaag ctggtgatgg
     7261 cacccgtcag tcgtatcgcc gatctgcagg ccgatccgca actgctgttc cggcaatttt
     7321 tccacacggt gccgatgccc ggtctgggca aggacgtcgc attccccggc ccgccgtacc
     7381 gtctgtcgga gccgctatgg cgtattgagc gagcgggcgg gtaggggggg cagatgtttc
     7441 cgcaattcct taagggcatt cgcttcgtcg acctgacatg ggccggcgcc gggccgtttt
     7501 ccaccaagct gtttagtgat tatggcgcag aggtcatcaa gatcgaaagc cgttcccgcc
     7561 ccgatccggt tcgcgtcggt ggtccctaca aggacgcgat tccggggatc aaccgcagcg
     7621 gctacttcgc gtcccgcaac accggcaaaa agagtttcgc gatcaacctg aaggcgccgg
     7681 ccagcaaggc gattttgttc gagctgatcc gcgacgccga tgtcgtcagc aataatttcg
     7741 gaccgggcgc gatggagcgt ctcggtctcg gctacgacgc actgaaggaa atcaagcctg
     7801 acatcatcta tttgtctatg ccgatgtatg gcgaagacgg cccgctggcc aatctgaccg
     7861 gtgtcggcat gacgatcagc gccgccagtg gcctgatgtg gcagaccggc tacgaaggcg
     7921 aaggcccgct gggacctggc acgcatttcc ccgacca
//
LOCUS       DATAVD010000342         3439 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2079497, whole genome shotgun sequence.
ACCESSION   DATAVD010000342 DATAVD010000000
VERSION     DATAVD010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3439)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3439
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2079497"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..559)
                     /locus_tag="VHX39_06410"
     CDS             complement(<1..559)
                     /locus_tag="VHX39_06410"
                     /inference="COORDINATES: protein motif:HMM:NF023697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3618 domain-containing protein"
                     /protein_id="HEX3990786.1"
                     /translation="MNRREPGASLVPYSANGPTRLSEIERNISDTRAALEQTLDELSE
                     RLLPAERLVTTGMDIAGGSIGQASLNRCLQFVRAHPVPAAVIGCGIVLAVLGTSDDPG
                     ASAPAVTEWKRLRIGAPSVFGEKRVSDTGETGPKATLPGTQIVIALGLVAGLVAAVLM
                     MRKGKGAAPRHSGERPSEKARGSETQ"
     gene            complement(556..960)
                     /locus_tag="VHX39_06415"
     CDS             complement(556..960)
                     /locus_tag="VHX39_06415"
                     /inference="COORDINATES: protein motif:HMM:NF018980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HEX3990787.1"
                     /translation="MIAPGAGREAERPIGVLLSNLVSEVVLLLRQEIELLKSEVQQKV
                     TSKTRAAGMLAVGGGLLLSGWFVLLAAATLGLAKVLPAWAAALIVAGVALVVGFAFLR
                     VGMRRLAREDLIPHRTFRSLHDDAVWLKERFR"
     gene            complement(957..1397)
                     /locus_tag="VHX39_06420"
     CDS             complement(957..1397)
                     /locus_tag="VHX39_06420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990788.1"
                     /translation="MSDIVETVIQPITNAVAGMRDQITSIATPLRRQARSGALAYLDE
                     QKQSAAHEVSAFADIVRRAAQPQDGQEASPVAGCATQFADRIDEFAGTLRDRSAADVI
                     ADTEALARREPALFLLGAVAVGFLLGFLLKSPDGATAKSAERYT"
     gene            1631..1990
                     /locus_tag="VHX39_06425"
     CDS             1631..1990
                     /locus_tag="VHX39_06425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990789.1"
                     /translation="MDEQHTTNAANTTTNAANTTTEAASDLLKQGKARIGEWQDAAGA
                     ALDQAKTTAQQVGTRVQEAARQAQDTAKATTDVLYEQSTQARDYVVRSVEERPLTALL
                     IAGAVGYGLAYLIHHRA"
     gene            complement(2110..>3439)
                     /locus_tag="VHX39_06430"
     CDS             complement(2110..>3439)
                     /locus_tag="VHX39_06430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990790.1"
                     /translation="LTGGSGADTLNLTSSGAANLSGVSNFEAIDLAVGGNAVTIADKT
                     LSGSAVTIQGGTGGNNTVNAGGTTKSSGKTLTYVAGNAIDKFTGGDETDAIKVSAAAI
                     GGDTLTGGTATKNTLTLTTAGAANLAGVSNFATITLAKGGNQVTVTDHTLSGGNVTIN
                     HGAGGSNAVDASGDTASSGRTLTYVAGTGTDTFTGGGEKEVVKVTAAAVGGDTLTGGS
                     AKTNTLTLTTAGTVNLGGVSNFETINLAAGNGTVTVTDATLSGGTVALNDSTSGNNTI
                     TVSDSAASAGTSLTYTAKTGTDSFTGGAENDTVVAGAGSSTFAAGTGSDFFVFTQSIL
                     PSQTINGFLVPSDHIVVYGIHQTGTGFDLGTADNGLNPTTDHAITAAIFTSNASGTFD
                     AGNTKERFVYNTTNGQLTYGSQGSGSASTTVVATLTGTPAISSANILFLH"
BASE COUNT          593 a         1127 c         1071 g          648 t
ORIGIN      
        1 cttgagtttc ggacccacgc gctttttccg acggcctctc gccgctatgg cgtggcgcag
       61 cgcctttccc cttgcgcatc atcaggactg cggcaacgag cccggcgacc aagccaaggg
      121 cgattacgat ctgggtgccg ggcagcgtcg ctttcgggcc tgtctctccg gtgtcggaaa
      181 cccgcttctc gccaaacacc gacggagcgc cgatccgcag ccgtttccat tccgtcactg
      241 ccggtgcgct cgcgccggga tcgtccgagg ttcccaagac ggcaagcaca attccgcagc
      301 cgatcaccgc ggccggcacc gggtgcgcac gcacgaattg gaggcatcga ttgagactgg
      361 cctggccgat cgacccaccc gcgatgtcca tcccggtggt gaccaggcgt tcggccggca
      421 acagcctttc ggaaagctcg tccaaggtct gttccaaggc ggcgcgcgta tcggagatgt
      481 tgcgctcgat ctcgctcagt ctcgtcgggc cgttcgccga atacggaacc agcgatgcgc
      541 cgggctctcg gcgattcatc ggaaacgctc tttgagccag accgcatcgt catgcaacga
      601 gcggaacgta cggtgcggta ttaagtcctc gcgcgctaac cgccgcattc cgactcgcag
      661 gaaagcgaaa ccgacgacca acgcaacgcc ggcgacaatc aaagccgcag cccacgccgg
      721 caataccttt gcgagcccaa gtgtcgccgc ggccaacaga acaaaccacc cgctgagcag
      781 caaccctccc ccgaccgcga gcatcccggc ggctcgggtt ttgctggtga ccttctgctg
      841 aacttcgctc ttcagcagtt cgatttcctg ccgaagcagc aggaccacct cgctcaccag
      901 gttcgacagc agcacgccga tcgggcgctc ggcctcccgg ccggccccag gcgcgatcat
      961 gtgtagcgtt ccgccgattt tgccgtcgct ccatcgggag atttcagaag aaagccgagc
     1021 aggaacccga cggcgaccgc tccgagcaga aacaacgccg gctcacgccg cgcgagtgcc
     1081 tcggtatcgg cgatgacatc ggcagccgat cgatcgcgaa gggtcccggc aaactcgtcg
     1141 atacgatcgg cgaactgcgt tgcgcaaccc gcgacggggc tcgcctcttg cccatcctgt
     1201 ggctgagcag cacggcgcac aatatcggcg aaagccgaca cttcatgggc ggcgctctgc
     1261 ttctgctcgt cgagataggc cagcgccccc gacctcgcct gtcggcgcag gggcgtggca
     1321 atgctggtga tctggtcacg catgccagcg acggcgttgg taatcggctg gatcaccgtc
     1381 tcaactatat cggacatact gttctccgga acttctaccg cagatccgcg gtttggtcag
     1441 cggttgaggt gtcatctgag aacgattggc tgccatcggg gttccaccgc cgcgttcggc
     1501 gtgtcctcga aaacccggcg aacgcgttcc cgagcgcgcg gacttttctg gaggccgccg
     1561 gcgttatgca tgcgagttag tcggaaccgg cccccgcggg gtccttccgc ttaaacagga
     1621 ggagagtgtt atggacgagc agcacaccac caacgccgcc aacaccacca ccaacgcggc
     1681 caataccacc accgaggccg ccagcgacct cctcaagcag ggcaaagcac gcatcggcga
     1741 gtggcaagac gctgccggcg ccgcactcga tcaagccaag accacggcgc aacaggtggg
     1801 cactcgtgtg caggaggcgg cgcgccaggc gcaggatacg gcgaaggcga ccaccgacgt
     1861 cctttacgag caaagcacgc aagcgcgcga ttacgttgtc cgcagcgtcg aggaacgccc
     1921 cctaaccgcg cttctcatcg cgggcgcggt cggctatggg ctggcctatc tgatccatca
     1981 tcgcgcataa ccggcagctc ggtttcaccg gtgacgcagt cgcggcgtca ccgggcgcgc
     2041 ccctacagtg cacgcgaccc cgaggacgac ggctccgcag aagactgcgg agccgttgtc
     2101 gttttcgtgt cagtgcagga ataaaatatt agcggaactg atcgcgggag taccggtgag
     2161 ggtggcgaca actgtcgtcg acgcgcttcc gctcccctgg gatccgtagg ttagctggcc
     2221 gttcgtcgta ttgtagacga agcgttcctt cgtattgccg gcgtcaaaag tcccgctggc
     2281 gtttgacgtg aagatcgccg cggttatcgc atggtccgtg gtcgggttca ggccgttgtc
     2341 ggcggtgccg agatcgaacc cggtgccggt ttggtggatg ccatagacga caatatggtc
     2401 gctcggcacc aagaacccgt tgatcgtttg gctgggaagg atcgactggg tgaaaacgaa
     2461 gaagtcgctg ccggtgccgg cggcaaaggt gctggaccca gcccccgcaa cgaccgtgtc
     2521 gttttccgcc ccgccagtaa agctgtccgt accggttttc gcggtgtagg tcagcgatgt
     2581 tccggcgctg gcggcgctgt cggacaccgt gatcgtattg ttgccgctgg tggaatcgtt
     2641 gagcgccacc gtgccgccgc tcagggtcgc atcggttacc gtgaccgtgc cgttgccggc
     2701 ggctaggttg atcgtttcga aattgctgac accgccaagg tttaccgtgc cggcagtcgt
     2761 caaggtcagt gtgttcgtct tggcgctgcc gccggtcagc gtgtcaccgc ccaccgcagc
     2821 ggctgtcacc ttgaccactt ctttctcgcc gccgccggtg aacgtatcgg tgccggtgcc
     2881 ggcgacatag gttaacgtcc tgccgctgct cgcggtatca ccggaggcgt cgaccgcgtt
     2941 gctgccgccg gcgccatgat tgatcgtcac gttgccgccg cttagcgtat ggtcggttac
     3001 ggtcacctgg ttgccgccct tggccagcgt tatcgtggcg aaattgctga cgccggccag
     3061 attcgcggcc ccggcagtgg tcaaggtcag cgtatttttg gtggcggtgc cgccggtaag
     3121 cgtatcgccg ccgatcgcag cggcggaaac ctttatcgca tcggtttcat caccgccggt
     3181 gaacttgtcg atcgcgtttc cggcgacgta ggtcagtgtc ttgccgctgc tctttgtcgt
     3241 cccgccggca tttaccgtat tgttcccacc ggtcccgccc tggatggtca ccgcggagcc
     3301 gctgagcgtc ttgtcggcaa tggtaacggc gttgccgcct accgcgaggt cgatcgcttc
     3361 gaagttgctg accccggaca gattggcggc cccggagctc gtcaggttca aggtatccgc
     3421 gccgctgccg cccgtcagc
//
LOCUS       DATAVD010000343         3581 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2453271, whole genome shotgun sequence.
ACCESSION   DATAVD010000343 DATAVD010000000
VERSION     DATAVD010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3581
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2453271"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..398)
                     /locus_tag="VHX39_06435"
     CDS             complement(<1..398)
                     /locus_tag="VHX39_06435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990791.1"
                     /translation="MHTGFLRFLSCGLPFICVRRAPIVSLLLACALLGLPAGAEAQGF
                     DPAKVGSPASGAPAELYLPAATPPPGAIVILHGCDGVGPHYRQWARRLTEWGYGALLI
                     DSFGPRGFHTKSNFNQEFQRVTGKSPSAWRT"
     gene            561..2183
                     /locus_tag="VHX39_06440"
     CDS             561..2183
                     /locus_tag="VHX39_06440"
                     /EC_number="1.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="choline dehydrogenase"
                     /protein_id="HEX3990792.1"
                     /translation="MTTSGEYDYIIVGAGSAGCVLANRLTADPRNRVLLLEAGGNDSD
                     PWIHIPAGFYRNIYNPKVAWYFETEPVPELNNRRISWPRGKTLGGSSSINGLIYIRGQ
                     SQDFDLWRQFGNAGWSYDDVLPYFRKAEDQERGANEFHGKGGPLGVSDLQTDHPLHDA
                     FIEAAQEAGYPLNHDFNGAQQEGVGPLQLTVRGRRRCSTAVAYLNPVRDRPNLRVEVR
                     ALTHKVLMQGKRAVGVRYSQNGVLHDAKARREVLLCGGAINSPQILQLSGIGPGALLQ
                     SVGIETVHDLPGVGENLQDHIGGRMIYRCIDGTVTMNEIYHSWLRRLYAGAEWILARK
                     GPLMTGAGPIGLFVKTRPELDSPDVQYQFLAGSSERTGEPMHKFPACTMVAIPCRPES
                     RGWLRITSADPTRPPAMQPNYLSTQRDRETIVAGLRVIRSIFATEAMRHWVTEEYLPG
                     PQATTDEDLLEHVRATSGTTFHQTSTCMMGPGPMAVVDTELRVKGTQGLRVIDAAIMP
                     TVVSGNTNATVIMIAEKAADMILNQATMRQAA"
     gene            complement(2187..3206)
                     /locus_tag="VHX39_06445"
     CDS             complement(2187..3206)
                     /locus_tag="VHX39_06445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3990793.1"
                     /translation="MIIDCHGHYTTAPKQHEAWRRQQIDEHTAGRKTPPRPAISDDEI
                     RETIVNGQLKVQRERGTDVTIFSPRAAGMGHHLGDAGTSEIWAVACNEMIHRVCSLFP
                     RNFIGACMLPQSPGVSPANCIAELERCVRDYGFVACNLNPDPSGGYWTDPPLTDRHWY
                     PIYEKLVELDVPAMVHVSMACNPAFHTTGSHYLNGDTAAFMQLLQGDLFKDFPTLKLI
                     IPHGGGAVPYHWGRFRGLAQVLKKPELTEHLLKNVFFDTCVYHLPGQELLTKVVPLEN
                     ILFASEMIGAVPGIDPDTGYNFDDTKRYIDQLPLSAEARATLYEGNVKRVYGRLAKQL
                     EKQFA"
     gene            3354..>3581
                     /locus_tag="VHX39_06450"
     CDS             3354..>3581
                     /locus_tag="VHX39_06450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP synthase (glutamine-hydrolyzing)"
                     /protein_id="HEX3990794.1"
                     /translation="MSDPVGSAPHTPDPAATTERVLVLDFGSQVTQLIARRLRESGVY
                     CEIWPFNADPARIAAFKASAFILSGGPASVYA"
BASE COUNT          697 a         1126 c         1103 g          655 t
ORIGIN      
        1 gtgcgccagg cgctcggact cttgcccgtt acccgctgga attcctggtt gaagttggac
       61 ttggtgtgaa agccgcgcgg cccaaaactg tcgatcaata acgccccgta tccccactcg
      121 gtgagacggc gagcccattg acgatagtga ggcccgacgc cgtcgcagcc atgcaggatg
      181 acgatcgcac ccggcggagg cgtggcggca ggtagataca actcggcggg agcgccgctc
      241 gctgggctac cgaccttggc tggatcgaac ccctgtgcct cggcgccggc gggcaagccc
      301 agcagcgcgc aggccaacaa cagcgaaacg ataggagcgc ggcgaacgca aatgaacggc
      361 agaccacaac tcaagaagcg caaaaagccc gtgtgcatga tgttcccaac ttagcattgc
      421 ctgtggcacc acgttcgcgt ttcctgacga tcgcgacaca aattcgaccc gcaccgctgc
      481 cgatcggcag cccaggactg gccaattccc ccgccatccg cttgactgcg cccaatcggc
      541 aatcggggga gcagcacacc gtgaccacca gcggagaata cgactacatc atcgtcggtg
      601 ccggatcggc cggctgcgtg ctggccaatc gcctgaccgc cgatccccga aaccgcgtgc
      661 ttctgctgga ggccggcggc aacgacagcg atccctggat ccatattccc gccggattct
      721 atcgcaacat ctacaaccca aaggtcgcct ggtatttcga aaccgagccc gtcccggaac
      781 tgaacaaccg ccgcatctcc tggccgcgcg gcaagaccct tggcggctca tcctcgatca
      841 acggactgat ctacatccgt ggccagagcc aggacttcga cctgtggcgg cagttcggca
      901 atgccggctg gtcctatgat gacgtgctgc cgtacttcag aaaggccgaa gatcaggaac
      961 gcggtgccaa cgaatttcac ggcaagggcg gaccgctcgg cgtgtccgat ctgcagaccg
     1021 atcatccatt gcacgacgcg ttcatcgagg ctgcgcagga agcgggatat ccgctgaacc
     1081 acgacttcaa tggcgcacaa caggaagggg tcggtccgct gcaattgacg gtgcggggcc
     1141 ggcggcgttg ctcgacggcc gtggcgtatc tgaatccggt tcgcgatcgc ccgaacctgc
     1201 gcgtcgaggt ccgcgcgctg acccacaaag tcctgatgca aggcaaacgt gcggtcggcg
     1261 tccgctattc tcagaacggc gttctgcacg acgcgaaagc gcggcgcgag gtgttgctgt
     1321 gcggcggtgc gatcaactcg ccacagattt tgcagttgtc cgggattggt ccaggagcgt
     1381 tgttgcaatc agtgggcatc gaaaccgtgc atgatctgcc gggcgtcggt gagaacctgc
     1441 aggatcatat cggcggccgc atgatctatc gttgcatcga cggcaccgtg accatgaacg
     1501 aaatttatca cagttggctg cgccggcttt acgccggagc cgagtggatc ctcgcccgca
     1561 aaggcccgct gatgaccggc gcaggtccca tagggctgtt cgttaaaacc cggcccgaac
     1621 tggacagtcc ggatgtgcaa tatcagttcc tggccggcag ctcggaacgg accggcgaac
     1681 cgatgcacaa gtttccggcc tgcaccatgg tggcgatccc atgccggccg gagagccgcg
     1741 gctggctgcg catcaccagc gccgatccga cgcgcccgcc ggcgatgcag cccaactacc
     1801 tttcgacgca acgagacagg gaaaccatcg ttgccggcct gcgggtgatc cgcagcatct
     1861 ttgccaccga ggcaatgcgc cactgggtca ccgaggagta cctgcccgga ccacaggcca
     1921 ccactgatga ggatctgttg gaacatgttc gtgccacctc gggcaccacg ttccaccaga
     1981 ccagcacttg catgatgggg ccgggaccga tggcggtggt cgataccgaa ctgcgcgtga
     2041 agggcaccca aggattgcgg gtgatcgacg ctgccatcat gccgaccgtg gtgtccggca
     2101 acaccaacgc cacggtcatc atgatcgccg aaaaagccgc cgatatgatt ctgaaccagg
     2161 ctacgatgcg gcaggccgcc tgacggtcag gcgaactgtt tttccaactg cttcgccagc
     2221 cggccataga cccgctttac gttgccctcg taaagcgtcg cgcgtgcttc cgcggacagc
     2281 ggcaattggt cgatgtagcg cttcgtgtcg tcgaaattat atccggtgtc cgggtcgatg
     2341 ccgggtaccg cgccgatcat ttctgaggcg aacaggatgt tttcgagcgg gaccactttg
     2401 gtcagcagtt cctgacccgg caggtgataa acgcaggtat cgaagaacac attcttcagc
     2461 aaatgctcgg tcagttccgg cttcttcagc acctgggcca gaccgcggaa ccgtccccaa
     2521 tgatagggca ccgcacctcc gccgtgcggg atgatcagtt tcagcgtggg aaaatctttg
     2581 aacagatcgc cttgcagcaa ctgcatgaag gcagcagtgt cgccgttcag atagtgtgag
     2641 ccggtggtgt ggaacgccgg attgcaggcc atgctgacat ggaccatggc cggaacgtcc
     2701 agctcgacca gcttctcgta gatcggatac caatggcgat cggtcaacgg cggatcggtc
     2761 caatagccgc cggacggatc ggggttcagg ttgcacgcca cgaacccgta atcgcgcacg
     2821 cagcgctcca gttcggcgat gcagttggcg ggagacacgc caggcgactg cggcaacatg
     2881 caggcgccga tgaagttgcg aggaaacagc gagcaaacgc ggtggatcat ttcgttgcag
     2941 gcaacagccc agatttcgct ggtgccggcg tcgccgaggt gatgacccat cccggccgct
     3001 ctgggtgaga aaatcgtgac atccgtgccg cgctcgcgtt gcaccttgag ctggccattg
     3061 acgatcgtct cgcgaatttc atcgtcgctg atcgccggcc ggggcggcgt tttgcgtccg
     3121 gcggtgtgtt cgtcgatctg ttgccgccgc catgcttcgt gctgctttgg cgctgtggtg
     3181 tagtggccgt gacagtcgat gatcatttgc tgattgctcc cttgcaccgg acgactccca
     3241 gggacgatta cggcacgtcc aatcgggacg caacacgcgg gccttgccag tgccggccga
     3301 tccgtggtcc aaggcgccga tcacacctgg acggagaccg tatgcccgac tccatgtctg
     3361 atccggtggg gtccgcgccc catactcccg atcccgccgc caccaccgag cgcgtcctgg
     3421 tgctggattt cggcagtcag gtgacgcagt tgatcgctcg ccggctgcgc gagtccggcg
     3481 tttattgcga gatctggccg ttcaatgccg atccagcccg tattgctgcg ttcaaggcca
     3541 gcgcattcat cctgtccggc ggcccggcga gcgtgtacgc c
//
LOCUS       DATAVD010000344         2175 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3383361, whole genome shotgun sequence.
ACCESSION   DATAVD010000344 DATAVD010000000
VERSION     DATAVD010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3383361"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..720)
                     /locus_tag="VHX39_06455"
     CDS             complement(<1..720)
                     /locus_tag="VHX39_06455"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3990795.1"
                     /translation="MPISKSARSDALNAWIRALGNTGALAKNPSITLPALIDDLAARY
                     SEHPALLSAGSNLTYRGLAERSNQYARWALANGLQPGEVVGLLMPNRPEYIACWLGIT
                     HVRGVVALLNTNLTGDVLAHSIGIVAPKHVIVDASLAHAMTQLLPGVQYWMHGDRPDC
                     GLSRIDLAIERYSGATLDASEQRPPSIEDRALHIYTSGTTGLPKAANISHFRLLEWSY
                     WFAGMMDTKPSDRMYNCLPLYH"
     gene            complement(763..1716)
                     /locus_tag="VHX39_06460"
     CDS             complement(763..1716)
                     /locus_tag="VHX39_06460"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3990796.1"
                     /translation="MFDADSEETVVSQGSITTRPFVSVVIPHYNDLARLRVCHGRLVQ
                     QSWPRNQFEIVVADNNSSCGLAAVQAAASSALVVPAPIQGAGPARNAGVAASHGSVIA
                     FIDSDCVPELDWIAEGVAALARFDFAGGRVGSFAQFPERPTSIEAYEIVFNFNFRRYI
                     ETVGFTGTGNMFVPRDTFDRVGGFRAVVAEDMEWSFRARALGYRLGYAERAGVGHPAR
                     RSWKELEQRWDRMLHEDFALILEQHYGRTRFALKALAMPASVLPHAAKVMCTADLPSL
                     GAKLGAIGVLTRLRLWRAARMLRLVFDNMMPRTLRPETRLR"
BASE COUNT          464 a          666 c          632 g          413 t
ORIGIN      
        1 gtgatacagc ggcaggcaat tgtacatccg gtcggacggc ttcgtatcca tcatgccggc
       61 aaaccaatag ctccattcca aaagccggaa atggctgatg tttgctgcct tgggcaagcc
      121 ggtggtgccc gaggtataaa tatgtaacgc ccgatcctcg attgacggcg gccgctgttc
      181 cgacgcgtcg agcgtggcgc cggaataacg ttcgatcgcc agatcaatgc gggaaagtcc
      241 gcaatccggg cgatcgccat gcatccaata ctgcacgcct ggcagcaatt gtgtcatcgc
      301 atgcgccagc gaggcatcga cgatcacatg ctttggtgcc acgatgccga ttgaatgcgc
      361 caatacatcg ccggtgagat tggtgttgag caacgccacg acacctcgga catgggtaat
      421 ccccagccag caagcgatat attcgggccg gttcggcatc agcaaaccta ccacttctcc
      481 gggctgcagg ccgtttgcca gtgcccatct tgcatactgg ttcgaccgct cggcgagacc
      541 gcggtaggtc aggttgctac cggcggacaa caaggcggga tgttcgctgt acctggcagc
      601 cagatcgtca atcagcgccg gcaaggtgat ggagggattt ttcgccagcg ctccggtgtt
      661 tcccaacgcg cggatccacg cattcagggc atcgctgcgg gcgcttttgg agatgggcaa
      721 cttcgtcctc gcctcaatga tgcagcgaat ttaatttcgc gattatcgca gccgcgtttc
      781 tggccgcaag gtccgcggca tcatattgtc aaacaccagc cgcagcatgc gcgcagcccg
      841 ccacaaccgc aaccgtgtca gcacaccgat cgcgccaagc ttcgctccca gggatggcag
      901 gtccgctgtg cacataacct tcgccgcatg cggcagcact gaggccggca tggccagcgc
      961 cttgagcgca aagcgagtcc gcccgtaatg ctgttccagg atcagggcga agtcctcgtg
     1021 caacatacga tcccaacgct gctcgagttc cttccaactg cgccgcgcgg gatggcccac
     1081 gcccgcgcgc tcggcgtagc ccaatcggta gccgagagcg cgggcgcgga acgaccactc
     1141 catgtcttcg gcgaccaccg cgcggaaacc gccaacccga tcgaacgtgt cccgaggtac
     1201 gaacatgttg ccagtgccgg tgaacccaac tgtttcgatg tagcgacgga aattgaagtt
     1261 aaacacgatc tcgtacgctt cgatcgaagt cggtcgttcc ggaaactggg cgaaggaacc
     1321 gacacgcccg ccggcaaaat cgaaccgcgc cagcgcggcg acgccttctg cgatccagtc
     1381 gagctcgggc acgcaatcgc tgtcgatgaa cgcaatcacc gaaccgtggc tggcagcaac
     1441 gccggcgttg cgcgctggcc cagcaccctg gatcggcgcc ggcacaacca acgcggacga
     1501 tgcggccgcc tgcaccgccg cgaggccgca ggaggagttg ttgtcggcca cgacgatttc
     1561 aaactgattg cgtggccagc tttgctgcac cagccgccca tggcaaaccc gcaatcgggc
     1621 caggtcattg taatgtggga tgacgaccga aacgaacggc cgcgtagtga tgctgccttg
     1681 cgaaaccaca gtttcctcgg aatctgcgtc gaacatttgc tcgcctattg taagcaggcc
     1741 actagctgag gggaagtgtt ttcattttcc tcggactttg tctctgcagg tgtatggttc
     1801 tcggctgata cctcgaaagt tcagggtgaa ccttacaaca ttgctaccga cacgtataaa
     1861 caaaccggtg gcgccggagg ccgccgagat tgccgatcag atatacccac aacgtatgga
     1921 tcgtcatacc tgagtaactt caacggcgtg cccaggattg agttcgagcg gtggacgggt
     1981 ttggatctgc agcgccaaag cactgcgttg cgtcatcgat tgctgttatc ggatactcag
     2041 cagcgtatgc tatgatcagg atcggtcacc gaaccggcgg tcactccgat gaaaccattc
     2101 tgccagtgcc agtcgcatac agtcgcacaa cagcggattc gaagcgccag cccagacccg
     2161 cggtcgggca tggga
//
LOCUS       DATAVD010000345         1590 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1149252, whole genome shotgun sequence.
ACCESSION   DATAVD010000345 DATAVD010000000
VERSION     DATAVD010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1149252"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..505
                     /locus_tag="VHX39_06465"
     CDS             <1..505
                     /locus_tag="VHX39_06465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990797.1"
                     /translation="YRGDGEANWQLLQTNIHHSYTSFDLTRIPDGGYTLRVMASDAPS
                     HPTGDALTGYKDSEHFLLDTTPPVLSALRATLRDGTIHVAFDAQAKLSTIARAYYSVD
                     AGPWQYMEPVGHLSDALEEHYDVSVPLPPRNANAALAPALPQQHVIAVRVLDRAGNAA
                     TGKTVVE"
     gene            514..>1590
                     /locus_tag="VHX39_06470"
     CDS             514..>1590
                     /locus_tag="VHX39_06470"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3990798.1"
                     /translation="MRFELFIASRYLRAKRRQALVGVITAISIVGVAAGVAALIIALA
                     ITNGMRRDLQQRLLGSTAHVELMRIASDGIEDWRALTDRLRHLPHVTAAAPALYGQVL
                     ISRGARSGGALIKGVLPGEERTVSTLLNNVKEGSAAELAPASSPDGNTPPPLVLGSDL
                     ADQIGASVGSTVLVTSPQGELTPFGLVPKYQRFRVAGIFHSGFYQYDSSFALARLADV
                     QHLFGEPNVVSVISFKVDDLYHADRIGREIEKAAGKGFMTTNWMEQNRELFRALRLEQ
                     VVTFIVIGLIVCVAALNILIALTMMVMEKTRDIAVLMSYGVKPAQVRRIFLWQGMLIS
                     ILGTIIGLIVGYGLSWAGGHYRFIH"
BASE COUNT          285 a          463 c          507 g          335 t
ORIGIN      
        1 ctaccgtggc gatggtgagg cgaactggca gttgctgcag acgaacatcc accactcgta
       61 tacatcgttc gatctgacgc gcataccaga tggcggctat acgctgcgcg tgatggcgag
      121 cgacgcgcct tcgcatccga caggcgatgc gctgacggga tacaaagaca gcgagcattt
      181 cctgctcgac accacgccgc ctgtgctgtc ggccttgcgg gcaactttgc gggatggaac
      241 gatccatgtt gcgttcgacg cgcaggcgaa gctttcgacg attgcgcgcg cttactattc
      301 cgtcgacgcc gggccatggc aatatatgga accggtcggc catctgagcg atgcacttga
      361 ggagcattat gatgtcagcg taccgctgcc tccgcgcaac gcgaacgcgg cgttagcacc
      421 agccctgcca cagcagcatg tgattgccgt ccgggtgctg gaccgcgcgg gcaatgcagc
      481 tacgggcaag accgttgttg agtaacctta tccatgcgct ttgagctttt catcgccagc
      541 cgttatcttc gcgccaaacg tcgccaggcg ttggtgggcg tgattacggc catctctatc
      601 gtgggggtgg cggcgggcgt ggcggcgctg atcattgcac tcgccatcac taacggaatg
      661 cggcgcgatc tgcagcagcg cttattgggc tcgaccgcgc acgtggagct gatgcgtatc
      721 gcgagcgatg gcatcgagga ctggcgcgct ctgacggatc gtctgcgcca tctgccgcat
      781 gtgaccgccg cagcccccgc actctacggg caggtgttga tctcgcgcgg tgcgcgttcc
      841 ggcggtgcgc tgatcaaagg cgtgctgcct ggcgaggaac gcaccgtcag cacactgctc
      901 aacaacgtga aggaaggcag cgcggcggaa ctggctcctg catcttcacc tgacggaaat
      961 actccgccgc cgctggtgct gggctccgac ctggcggatc agattggcgc cagcgttggc
     1021 tcgaccgtgc tggtgaccag cccgcaaggc gagctgacgc cgttcggtct ggtgccgaag
     1081 tatcagcggt tccgggtcgc ggggatcttt cattccggct tctatcaata cgactcctcc
     1141 ttcgcgctgg cgcggctggc ggatgtgcaa cacctgttcg gcgagccgaa tgtggtctcc
     1201 gttattagct tcaaagtgga tgatctgtac catgccgacc ggattgggcg cgaaatcgag
     1261 aaggcagccg gcaagggatt tatgaccacc aactggatgg agcagaatcg tgagctgttc
     1321 cgcgcgctgc gcctggaaca agtcgtcacc ttcatcgtga ttggcctgat cgtctgtgta
     1381 gcggcgctga atattctcat cgcgctcacc atgatggtga tggagaagac gcgcgacatc
     1441 gccgtgctga tgtcttacgg cgtgaagccc gcgcaggtac gccgcatttt tttatggcag
     1501 ggaatgctga tcagcatcct gggcacgatc atcggtttga ttgtgggcta tgggttgtcc
     1561 tgggcgggcg ggcattaccg cttcatccat
//
LOCUS       DATAVD010000346         5109 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1149372, whole genome shotgun sequence.
ACCESSION   DATAVD010000346 DATAVD010000000
VERSION     DATAVD010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5109
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1149372"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..311
                     /locus_tag="VHX39_06475"
     CDS             <1..311
                     /locus_tag="VHX39_06475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990799.1"
                     /translation="ALSLAYVALAVLHPVSSTLQLLNRQKLAAAWQISRVAMLVGAAI
                     SAQRYGLSAVAALWVCSTIQALACTGMLTTMAVCIHREAENSVSSKRTAAPLMSQSGD
                     "
     gene            338..1888
                     /locus_tag="VHX39_06480"
     CDS             338..1888
                     /locus_tag="VHX39_06480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990800.1"
                     /translation="MSHRRAAMPLQRASVQRWRSTSVAEAFLWSLIIAGCLRAFSFGV
                     TGLDWDESFYAVVAQRWLNGGVPYADIWDIHPMGVPALYALAIWLVGDGLLAARLLAW
                     FAVAGTATLLWAFAERYLRLWPAGLLAGVSYLAYMARPEGLAANTEVFNNLAVAAASF
                     VLAGELISARVVPVFAGSLLLGVGLQFKYVVFPEAAMLCGTLLLYQLRNGATLRRTIG
                     LAGIAIAGGLLPTLIATAYYWWAGALPAYLDATLRANIAYVDEPLVWSTIFLRLRYGL
                     LPISGLLVWPFVLAVLARRRVFDSRQRVICLWVIIWLVAACIDVIMPLKFWKHYFNAL
                     VPPLCLISALGATLLAHEMAANFGRVLAVGVTLTLLPAAVEIAGHISDSRSFGRTNVP
                     REIADRINAGGSNGHDVYVFDYDPLVYVWSDNAPPSRFVLGVELAEFAAGTGTSAEAE
                     IGRILDTRPRWIVLERPSPYHYTDAILGELNTALRNYKLDATFPETDYIQPTVEVALY
                     RRVGEHGE"
     gene            3729..4046
                     /locus_tag="VHX39_06485"
     CDS             3729..4046
                     /locus_tag="VHX39_06485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990801.1"
                     /translation="MSWLDTARADGIDATEDLRLRPWPMPVTAQVIGVFRTGMTMATW
                     LVVGQNGLWTVVSVAEGTVLATRPTLAAALAVIHSPPATDANANAEPAVAHDDKVTAE
                     TSN"
     gene            4195..4842
                     /locus_tag="VHX39_06490"
     CDS             4195..4842
                     /locus_tag="VHX39_06490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990802.1"
                     /translation="MQQRLLILAAVLVAVPTLVWARPLMLPIHDVVVEYHSRGMVPGP
                     SGTLTTTVMVRFAGNGDRLRVDGPYGGFYALVEVDEARMIMVMPDQRIYVDQPADPDL
                     IALLQADDPSFQRIGMERVAGFDCTDYNANINGHYGRVCLTDDGVLLRAQIDEPDRRP
                     ELEAVSVTYAPQPSDMFEVPDGFRRVFLPRVPHGLGMGPLGNAAPDSQIFGRQGR"
BASE COUNT          889 a         1582 c         1602 g         1036 t
ORIGIN      
        1 acgccttgag tttggcctat gtggcactcg ccgtgctgca tccggtttcc tcgacattgc
       61 agttgctgaa ccggcagaaa ctggcggcgg catggcagat ttcccgggtc gcgatgctgg
      121 tcggcgcagc catctctgcg caacgttacg gactttcggc ggtggcggcg ttatgggtct
      181 gctcgacgat ccaggcactg gcgtgtaccg gcatgctgac gaccatggcg gtgtgcatcc
      241 accgtgaggc cgagaacagt gtttcatcga aacggacggc cgcgccactc atgtcgcagt
      301 ccggagactg attgtggctc acaacgaaac tcagacgatg agtcatcggc gcgctgcgat
      361 gccgttgcag cgcgcgtcgg tgcaacgttg gcggtcaacg tcggtcgccg aggcgttttt
      421 atggtcgttg atcattgccg gctgccttcg tgccttttca ttcggtgtca ccggactgga
      481 ctgggacgag agcttctatg ccgtcgtcgc acaacgctgg ctgaatggcg gcgtgccgta
      541 tgccgacatc tgggatatcc acccgatggg cgtgccggcc ctgtacgcgc tggccatctg
      601 gctggtaggc gacgggctgc tcgccgcgcg cctgctggcg tggttcgctg tcgccggcac
      661 cgcaacgttg ctgtgggcat ttgccgagcg ttatctgcgg ctgtggccgg ccggattgtt
      721 ggctggcgtg tcttaccttg catatatggc gcgccccgaa ggactcgccg caaacaccga
      781 ggtgttcaat aatttggctg ttgccgctgc gagtttcgtg ctcgccggcg aactgatttc
      841 cgcccgcgtg gtgccggtgt tcgcaggttc gttgcttctg ggcgttggcc tgcaattcaa
      901 atatgtcgtg ttccccgagg cggcaatgct gtgcggcact ctattgctgt atcagctgcg
      961 caacggtgcg acgttgcggc ggacgatcgg gctggccggc atcgccattg ccggcggcct
     1021 gctgccaacc ttgattgcca cagcttatta ttggtgggcc ggggcgctgc cggcttacct
     1081 cgacgccacg ttacgagcca atattgccta tgtcgacgaa ccgctcgtct ggagcacgat
     1141 cttcctgcgt ttacggtatg gattattgcc gatctccggc ctgctcgtct ggccgttcgt
     1201 gctggcggtg ttggcacgcc gacgagtatt cgactcgcgt cagcgggtga tctgtctgtg
     1261 ggtcataata tggcttgttg ctgcctgcat cgatgtcatc atgccgctta aattctggaa
     1321 gcactatttc aacgctttgg tccccccact ttgtttgatt tccgcactcg gtgccaccct
     1381 gctggcgcac gaaatggcgg cgaactttgg ccgggtgctg gctgtcgggg ttacccttac
     1441 cctgctgccc gctgcggtcg aaatcgcagg acatatcagc gacagccgca gcttcggccg
     1501 caccaacgtg ccgcgcgaga tcgccgatcg gatcaatgcc ggcggcagca atggtcatga
     1561 tgtctatgtg ttcgactacg atccactggt ctacgtctgg tcggacaatg caccgccatc
     1621 gcggtttgtg ctcggcgttg aactggcgga gttcgccgcc ggcaccggca ccagcgcgga
     1681 agccgaaatt ggccggatac tggacaccag gccgcgctgg atcgtgttgg agcggccatc
     1741 gccttatcac tacaccgatg caatcttagg ggaactcaat accgcattgc ggaattataa
     1801 gctggatgcc acgttccccg aaactgacta cattcagccc acggtcgagg ttgcgttata
     1861 tcgccgcgtc ggcgagcacg gagaatgaac atcgtgtcat gttgcggcat gtgccagcga
     1921 gcagcaattc gtgactggac agcaccgcat ctgtcatggc ttgatgaaat caacgttgag
     1981 cgggagccgg gaacatcacc acgctgacat tcatacggat cgttgaggac ggtgacgatg
     2041 gtccacatca acccaggtga tttgccagcc cttccggtgg agcaactggc gcaattcctg
     2101 ctgggatgcg cccgcgagga tccgactctg ctggcgcgtt caaacagcgg cccgatacta
     2161 cggcgagatg cgaacatccg ggtgcccgtg ggcaggccgg tagacacaac ggtaacgccg
     2221 agtgacgcgg ttaccaggcc aattgacgcg acagcaagac ccgttgtcgg gaggccggac
     2281 gaagcgccgg cccgcccaat cgaagcgttc gccaggcagg gtaaccccgc agcgccaatc
     2341 gagtggacgg acttgccgaa tgacccgtct gcgcgcccgg tcgaggcgct ggaggggccg
     2401 attgattcga cttccagacc gaatgtccca tccttcggat ggattgacag cccgccggtg
     2461 ccaatcgagg cgttgaccgg accggctgac tccactccca ggccaatcgt cccgtccttc
     2521 gggcggactg atggcccgag tgtgccaatc gaagcgttga ccggaccggc tgatctcgct
     2581 cccaggccga ttgtcccatc cttcgggcgg attgacagcc cgaccccacc aatcgagcca
     2641 ttaactgggc cggttgaccg ctcagccaga cccattgtcc catctttcag tcggttagcg
     2701 gcgacgtccg atgcggttga ccaaacagcc aggctggccg cgcagaagct acagcttcgc
     2761 cggtcggacg gcagggacga cccggagctg gaagaactgg tctccatagc cgtcgcctgc
     2821 gcacggcggg ctgaggacgc cttgcaacag gcgcgcgaaa tcagctggat ggcgcgccgg
     2881 aggatgtcca tcgtcgctgc cgtcaccggt gctggcgtat tggcagcgtc aggggtgggt
     2941 attctcgatc gttatcatgc aatcggtgag caccacctgc ccacgattgc cagcgcgatc
     3001 atcacaggtg ggccaatcgc tgctcccgtt ctgccggccg gccccgctcc cgcacctgct
     3061 gtggttgcat cttcgtctgg cgggcccgtg tctccggcag ccaaacccgc gccggttctg
     3121 gatacggtcg ccgtgagacc accggccggg actgccgagc cagtttcggt tgcctctgcc
     3181 gtgccgtcgc cacacgagcc cgccgtcgcc gtcccagttg ctgccgtgcc ggcgcaagcc
     3241 gcgcccccgc cggttgcagc cgtggagccg ccgctggtca gacaggccga atccacacca
     3301 ggcacaaaag tcggtccagg aggttcgccc gctacatcgg ttaatccggt ggcgcctgct
     3361 gctaccgtcg cgcgagccgg gtcgccggcg ccaaatggtg attcccccgg cgcagttccg
     3421 gctggccaat caagtgtggt gtctgcctcg ctcgacgttg cgccggttcc cccgccggca
     3481 cagatttcgc acccgttccg gcatgtccgt cgggccagcc gtcacgtgac ctactatgca
     3541 agcggcccag gagtgctgct tgctcaggtc gtgtatgggg tgcggcggaa tatttacgag
     3601 atcttccact aaatcgcccg agcacagcca tgcggacaca atcttcagaa ccacgggcca
     3661 ccaccgcatc atccggttct tcgggaccgg gttccctcgg gctgtccgtc gaggatcgcc
     3721 ggcatctgtt gagctggttg gacactgccc gcgcggacgg cattgacgca acagaggacc
     3781 tgcgcctgcg gccgtggccc atgccggtca ccgctcaggt gatcggcgtg ttccgtaccg
     3841 gaatgaccat ggcgacctgg ttggtggtcg ggcaaaacgg tctttggacc gttgtttcgg
     3901 tagcggaagg caccgtactg gccacgcggc cgaccctggc agccgcattg gcggtcatcc
     3961 actcgccgcc ggcgaccgac gccaatgcga acgcggaacc ggccgtggct cacgacgaca
     4021 aggtcacggc cgaaacttcg aactgacgga ccgcgccaac ggagtaggat gatcggttgc
     4081 atcacgccga tatcgattcg gcaacaaaac acacgggcca gacaataaaa gcggaattca
     4141 tcaaccgcat ccacgctttg gggtctgggc tgccgctctg caaggaggcc gagagtgcaa
     4201 caaaggttgc tgattctggc tgcggttttg gtcgccgtgc caactctggt ctgggccaga
     4261 ccgctgatgt tgccgatcca cgatgtcgtc gtcgagtacc actccagagg catggtgccc
     4321 ggaccctccg gcaccttgac cacaacagtc atggtgcgat ttgccggcaa cggagaccgg
     4381 ttgcgcgtcg acgggcccta tggcggcttc tacgcactgg tcgaggtcga tgaggctcgc
     4441 atgatcatgg tcatgccgga tcaacggatt tatgtggacc agccggcgga tcctgacctg
     4501 atcgctctgc tgcaggccga tgacccttcg ttccagagga tcggtatgga gcgagtcgcc
     4561 ggcttcgact gcaccgatta caacgccaac atcaacgggc attatgggcg agtgtgcctg
     4621 accgatgacg gcgtgttgtt gcgggcgcaa atcgatgaac cggatcgccg ccctgaactg
     4681 gaagcggtga gcgtcaccta tgccccgcaa ccctcggata tgttcgaagt tcccgacggg
     4741 ttccgccgcg tgttcctgcc cagggtgccg catggcctgg ggatggggcc gctcgggaat
     4801 gcggcgccag atagccaaat cttcgggcgg cagggacgct gacgcggttt gacgccgtgt
     4861 tcccgcttag gagcatggtt gcgccagcca gactgagtgc accctgcggc ttcagcattt
     4921 ggctggtcga acatgccgac gccgcacgct ttttcctctt ccatgttccg gaccagaatg
     4981 ccatcgaccc acctgggata ttcaatcggg acgtagctgt gcatcatcgc gacatttcaa
     5041 gcgttgatca tggcaatgga atagcagagg aaagacattt gccgaggcca ttcgcctggg
     5101 agacctatc
//
LOCUS       DATAVD010000347         2404 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1149428, whole genome shotgun sequence.
ACCESSION   DATAVD010000347 DATAVD010000000
VERSION     DATAVD010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1149428"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..295)
                     /locus_tag="VHX39_06495"
     CDS             complement(<1..295)
                     /locus_tag="VHX39_06495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990803.1"
                     /translation="MDQSPLASLLDWLKKPEPEVELAQLERSTVPDAPMSLFMRIQTA
                     DGPRTMIASGVTVAAASQISEALALSGHYAEFVDQCFTKDTVLERVRRKRLEKL"
     gene            complement(631..>2404)
                     /locus_tag="VHX39_06500"
     CDS             complement(631..>2404)
                     /locus_tag="VHX39_06500"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX3990804.1"
                     /translation="NTANGFSAAPGTPGAGLNPRTGTVISSGQAGNLFSSSLVNSQTG
                     ALLPTATGEPTLGTAAELVFDPTGFRPMEVLKEDDYQYNVGEKFNLAGWAFDMDIGYG
                     KDIDMIYTWNSGNRSLFIDTHSSPTNFYDGSFTASQLTGTIDATHAYNVGMASPLTVA
                     IGGEVREDTYAIGAGDPASYYKEGAQSYPGFPPSGTSDHSRKNYAGYVDFALAPIEAL
                     QLDVAGRVEHYTDFGDAEIGKITARYDFNPQWAVRGTISTGFRAPTLAEEFFTAVNVS
                     PTNATVQLPADSAAANFLGLSNLKPEISTSYSVGIVAHPLQDLSATVDAYSITIGDRI
                     AASSELYGLGGTPLVPSIVNPAIALAGVTLDPTVTQYGVTAFLNDVSTLTQGVDATVN
                     YPTDFGDKGLVNWTLAGNFNETTITRIAPPPAPVLLASSTATFFSFGSEFGYTHSLPN
                     WKIGLTGDWSLDEYGATVRETYYGPSHGYASPNGGGEYTPSNQASVVLTDLELRYNFT
                     DQLQFAFGGNNIFDIKPDILGAAPATCGAGVIIIPGGSCTAGPNKASGQVLAGGNGSV
                     YQTPLGTAFDPNGGYYYARVNFNF"
BASE COUNT          481 a          700 c          761 g          462 t
ORIGIN      
        1 gcaatttctc cagccgcttg cgccgcacgc gctcaaggac cgtgtctttg gtgaagcatt
       61 ggtcgacgaa ttccgcgtaa tgaccggaca gcgccaaggc ctcgctgatc tgggacgcgg
      121 ccgcgaccgt gacacccgaa gcgatcatcg tgcgcgggcc gtcagcggtc tggatgcgca
      181 tgaacaggct catgggcgcg tcgggaacgg tgctccgttc cagctgtgca agctccactt
      241 ccggctccgg cttcttcagc caatcgagca gagaagcaag ggggctttga tccatcgcgg
      301 tacaccttcg ggcggttact aaccctctcc cgcacaagcc gtaccagcga gaaaagccca
      361 tcaaaccagc acaatccggg gtggtgacgg cgtgcgttgt cccaagcctg gaaaggcgtg
      421 ccaaagtggc taggggttcg gcgcgagcgg ccgataagtt ccatcctgcc aatcataggc
      481 caggaccgcc ggtggaaccg gcgcggcaaa gcgaatccgc aactctctgc cgaaatcgat
      541 atcgccatcc ttcagaaaac ggcccaggcc agagcctggg ccgtgcttgc cttgccgtcc
      601 ggggagacat tgaaacgcaa ggaggcgcag tcagaagttg aagttgacgc gggcatagta
      661 atagccgcca ttgggatcga acgcagtgcc caacggggtt tgatacacac tgccattgcc
      721 gccggccaga acctggccac tggccttgtt ggggcccgca gtgcaagagc cgcccgggat
      781 aatgatcacc cctgccccgc aggtggccgg tgctgcgcca agaatgtcgg gcttgatgtc
      841 gaagatattg ttgccgccga acgcaaactg gagctgatcg gtgaaattat accgcaactc
      901 caagtcggtc agtacgacgc tggcctggtt ggatggggta tactcaccac caccattcgg
      961 gctggcatag ccgtggctcg gaccataata agtctcgcgc acggtggcgc catattcatc
     1021 cagcgaccag tcgcccgtca ggccgatttt ccagttgggg agagagtgcg tatagccgaa
     1081 ctcgcttccg aagctgaaga aggttgcggt cgagcttgct agcaggacag gtgccggcgg
     1141 gggggcgatg cgggtaatcg tggtctcgtt gaagttgccc gccagagtcc agttcaccag
     1201 acccttgtcg ccgaagtcgg tgggatagtt gaccgttgca tccacgccct gcgtgagcgt
     1261 ggaaacgtcg ttcaagaacg ctgtcacgcc atactgcgtc acggtgggat cgagcgtgac
     1321 acctgccagc gcgatcgccg gattcacaat cgacggcaca agaggggttc cccccaggcc
     1381 atagagctcg cttgaggcgg cgatgcggtc gccgatagtg atcgaatagg catccaccgt
     1441 ggcgctgaga tcctgcagcg gatgggcgac aatgcccacg ctatagctgg tggagatttc
     1501 aggcttcagg ttgctgaggc ccaaaaaatt ggccgccgcc gaatcggcgg gcaactgcac
     1561 cgtggcattg gtcggcgaca cattgacggc ggtgaagaat tcctccgcca gggtcggcgc
     1621 acggaagccg gtcgagattg tgcctcggac cgcccattgc gggttgaagt cgtaccgcgc
     1681 cgtgatcttg ccgatctcgg cgtcgccgaa gtcggtgtaa tgctcgacgc gtccggcgac
     1741 gtcgagctga agcgcttcga tcggtgccag cgcgaagtcg acataacccg cataattctt
     1801 gcggctgtga tcgcttgtac ctgacggcgg gaagccaggg taggactgcg cgccttcctt
     1861 gtaataggag gccggatcgc cggcaccgat ggcgtaagta tcttcgcgca cttccccgcc
     1921 gatcgccacc gtcaaaggcg aggccatgcc cacattgtag gcatgggtgg catcaatggt
     1981 gccggtcaat tggctggcgg tgaagctgcc gtcatagaaa tttgtcggcg agctgtgggt
     2041 atcgatgaac agcgagcggt tgccggagtt ccaggtatag atcatgtcga tatctttgcc
     2101 gtagccgata tccatatcga acgcccagcc ggcgagattg aatttctcgc cgacattgta
     2161 ctgataatcg tcttccttca gcacttccat cgggcggaag ccggtcggat caaagaccaa
     2221 ttcggctgct gtgcccaatg tcggttcgcc agtggccgtc ggcagaagcg cgccggtctg
     2281 ggagttgacc aagctcgagc tgaatagatt gcccgcctga cccgacgaga tcacagttcc
     2341 tgtgcgcggg ttcaggcccg cgcccggtgt gcctggcgcg gcactgaaac cattggcggt
     2401 attg
//
LOCUS       DATAVD010000348         1886 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2639697, whole genome shotgun sequence.
ACCESSION   DATAVD010000348 DATAVD010000000
VERSION     DATAVD010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1886
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2639697"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1294
                     /locus_tag="VHX39_06505"
     CDS             <1..1294
                     /locus_tag="VHX39_06505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydrogenase expression protein HypE"
                     /protein_id="HEX3990805.1"
                     /translation="ALLDADDQHRIGVITLPCPEGYYPSVGATHPPAIRLERAIRDLF
                     GFEPVGLQDPRSWLDHREGANYPFLPVEGEGLHQIPVGPVHAGIIEPGHFRFTCDGET
                     VVRLEQRLGYVHKGVDELFVGASLEQAARLACRVSGDSAVAISLGFARAVEAALDFTP
                     PRRAVRLRALMAELERIANHLGDFGAVCNDASFAMIHAHCAVLRERVLRAADGAFGHR
                     LMMDQIVPGGVTVDLNAQNMAAIVGLVGEVRDRFTAVVKLYDETASLQDRTVGTGILH
                     PELARQFGAGGYVGRASGRAFDARKHPGYAPYDSLTFDVPVLSQGDVNARLWVRVAEV
                     KQSLSLIEDLLHGMPYGEVMAQVPIRSGEALTLTEAFRGDVLVWLRVNEGFVDRCHVR
                     DASWFQWPLLEAVIEGNIVADFPLCNKSFNCSYSGHDL"
     gene            1335..1838
                     /gene="nuoB"
                     /locus_tag="VHX39_06510"
     CDS             1335..1838
                     /gene="nuoB"
                     /locus_tag="VHX39_06510"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HEX3990806.1"
                     /translation="MLRFLSEGLRRPLTDRRRPVDPAFAALAANLNETVQRRLGHSLA
                     IRQVDAGSCNGCELEIHALNNAFYDIEQFGIRFVASPRHADVLLVTGPVTHNMQEALE
                     RTWRATPDPKWVVAVGDCGADGGIFAASSAVVGGVAAVVPVDLVITGCPPSPTRLLTG
                     LLSLFKD"
BASE COUNT          306 a          541 c          640 g          399 t
ORIGIN      
        1 ggccctgctg gacgccgacg atcagcaccg tatcggtgtg atcacgctgc cgtgtccgga
       61 aggctactat ccctcggttg gtgcaaccca tccgccggcg attcggctgg aacgcgcgat
      121 ccgcgacctg tttggcttcg agccggtggg tttgcaggat cctcggtcct ggctcgatca
      181 ccgcgaaggc gcgaattatc cgttcttgcc ggtcgagggc gagggtctgc atcagatccc
      241 ggtcggtccg gtgcacgccg gcattattga gcctgggcat tttcgtttca cttgcgacgg
      301 cgaaacggtc gtgcggttgg agcaacgact tggctacgtg cacaaaggcg tcgatgaatt
      361 gttcgtcggt gcgtcattgg agcaggcggc gcggctggcc tgccgggtct caggcgacag
      421 tgcggtagcg atcagccttg ggtttgcacg cgcggtcgag gcggcgctgg atttcactcc
      481 accgcggcgc gccgtccggt tgcgcgcgct gatggccgag ttggaacgga ttgccaacca
      541 cctcggcgat ttcggtgcag tctgcaacga tgcgtcgttc gcgatgatcc atgcccattg
      601 cgcggtgttg cgggagcgtg tgctgcgtgc cgcagacggt gcgttcgggc atcgattgat
      661 gatggaccag atcgttccgg gcggtgtgac ggtggacctg aatgcgcaga acatggctgc
      721 gatcgtcggg ctcgtgggtg aggtgcgcga taggtttacc gcggtggtga agttgtatga
      781 tgaaacagcg tccttgcagg atcgtacggt cggaactgga atactgcacc cggagctggc
      841 gcggcaattt ggcgcggggg gctatgttgg ccgtgcctcg ggccgagcct tcgatgcacg
      901 caagcatccc ggatatgcac cgtacgactc gctgacgttc gacgttccgg tgctgagcca
      961 gggcgacgtc aatgcccgcc tctgggtccg tgtcgccgag gttaagcaaa gcctgagcct
     1021 gatcgaggat cttctgcacg gcatgccgta tggtgaggtt atggcccagg tgccgatacg
     1081 gtctggcgag gcattgacct tgaccgaggc attccgtggc gacgtgctgg tctggttgcg
     1141 ggtcaacgaa gggtttgtcg atcgctgcca cgtgcgcgat gcgtcgtggt ttcaatggcc
     1201 gctgttggag gcggttatcg agggcaacat cgtggccgat ttcccgctgt gcaataagag
     1261 tttcaattgt tcgtattcgg ggcacgatct gtgaaacatc gaggaacggt gcggacgcgg
     1321 aggatccttg tccaatgctg agatttctga gcgaaggctt gcgccggcca ctgaccgatc
     1381 ggcgccggcc ggtggatccg gcattcgccg ccctcgctgc caatctcaat gagacggtgc
     1441 agcgtcgatt gggccatagt ctcgcgatcc gccaggtgga cgccggttct tgcaacggct
     1501 gcgaactgga aatccatgcg ctgaacaatg cattttacga tatcgaacag ttcggcattc
     1561 gttttgttgc gtcaccgcgc cacgccgatg ttctgctggt gaccggaccg gtgacgcaca
     1621 acatgcaaga agcactcgag cgcacctggc gcgccacgcc cgacccgaaa tgggtggttg
     1681 cggtcggaga ttgcggcgcc gatggcggca tattcgccgc cagttccgcc gtcgtgggcg
     1741 gcgtcgcggc ggtggttccg gtcgacctgg tcatcaccgg ctgcccaccg tcgcctaccc
     1801 ggctgctcac gggcctgtta tcgctgttca aggactgacg cgcagccgga acccccgccg
     1861 ttcacgccgc gccaaaaaac taccgt
//
LOCUS       DATAVD010000349         2363 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_779534, whole genome shotgun sequence.
ACCESSION   DATAVD010000349 DATAVD010000000
VERSION     DATAVD010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2363
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_779534"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1106
                     /locus_tag="VHX39_06515"
     CDS             <1..1106
                     /locus_tag="VHX39_06515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990807.1"
                     /translation="VAEAFRLNREGDDVLIDFGRLDGVPVPAGLVSIQITDRVTLPLE
                     SARRLLLWLDDAVAPHAARMRAEQIKGLAPAAAAVATRPDHVPQRPRHDPSGERAAQL
                     LQAVGAWQVPHQYERSLRMTQASLQANRFLLTVNTKDIPGDAAPAVLAICDQFTMPPQ
                     LRSDAAENFAMAKCIHFGFEGEPDSIVCKLYLEANVSADEANLARNMKQPVLLHLAFK
                     WDLVKGGGVTSRYLWHPFLSAAEIGHRLDRIYQDGPAASVAVARAVLQAAAERAPAEK
                     LQYLEVEEPQTSRRSFDLNLYNSTMHVRDIQSLLLRLREQYGIRPGQFQALYDQIKGM
                     RLGHLAGGVHRDKRDFFNVYYGATGLPRFNGRL"
     gene            1130..1999
                     /locus_tag="VHX39_06520"
     CDS             1130..1999
                     /locus_tag="VHX39_06520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990808.1"
                     /translation="MGIEEWFEYVTSQDPSLNYCLWPYQAPAPGEDKFRSVNLLYQSF
                     AFAGINERAFAVVDAIRDGIGAFKTVFGVKLADGRLGWEFYFYDYKRRQRVVSMSHVL
                     RAIHDYMPTRIRPNERLPYFMFSLDLNNALVTGAVPLDVVHMYIGNPGSQVSSGIAYA
                     IREDSISLENFYFFFDARTQLADVAGKIGSAAVFDDTVLPIDAVLRPELRRCQTICLA
                     NKQSHDCIYFSGVDVDQLQWFLDWQQYPPEVTAFIRTNRSNLDHLLFDVGFDYRMVGD
                     RLLVIKSGYYGVF"
BASE COUNT          462 a          668 c          741 g          492 t
ORIGIN      
        1 tcgtggccga ggcgttccgc ctgaaccgcg aaggcgatga cgtgctgatc gatttcggcc
       61 gcctggatgg cgtgccggtg cccgcgggcc ttgtctccat ccaaatcacc gaccgcgtga
      121 ccctgccgct ggagagcgcc cgccgtctgc tgctctggtt ggatgacgcg gtggccccgc
      181 acgcggctcg gatgcgggcg gagcagatca aaggactcgc gcccgcggcc gcggcggtgg
      241 caacaagacc cgaccacgtg ccgcagcggc cccggcacga tccgtccggc gaacgcgctg
      301 cccaactgct gcaagcggtg ggcgcctggc aggtgccgca tcaatatgaa cgctctttgc
      361 gcatgacgca ggccagcctg caggcaaacc gtttcctgct cacggtgaac acgaaggaca
      421 ttcccggcga tgcggccccg gccgtgctgg caatctgcga tcaattcacc atgccgcccc
      481 agctacggtc ggatgcggcg gagaatttcg cgatggcgaa atgcatccat ttcggcttcg
      541 aaggtgaacc ggacagtatt gtctgcaaac tctatttgga agccaatgta tcggcggatg
      601 aggccaatct ggcccggaac atgaagcagc cggtgctgct gcatctggcg ttcaagtggg
      661 accttgtgaa gggcggcggc gtgacgtcac gctatctgtg gcacccgttc ctgtcagccg
      721 cggaaatcgg gcaccggctg gaccggatct accaggatgg accggcggcg tcggtcgccg
      781 ttgcgcgtgc cgtgttgcag gccgccgccg aacgtgcacc cgcggaaaag ttgcagtatc
      841 tggaggtcga ggagccacag acgtcccgcc ggtcgttcga cctcaatctc tataacagca
      901 cgatgcacgt gcgggatatt caaagccttc tgctgcggtt acgggaacag tacggtatcc
      961 ggccggggca gtttcaggcg ctgtacgacc agatcaaagg gatgcgcctg gggcacctcg
     1021 ccggcggcgt gcatcgtgac aaacgagact tcttcaatgt gtattacggg gcgacgggcc
     1081 tacctcggtt caacgggcga ctgtagcagc ccagcggcag gaacgatcga tgggcatcga
     1141 ggagtggttt gaatatgtaa ccagccagga cccgtcgttg aactattgcc tgtggcccta
     1201 tcaggcaccg gcaccgggcg aggacaagtt ccggtcggtg aatctgctgt atcagagctt
     1261 cgcgtttgcc gggatcaacg aacgggcgtt cgccgttgtt gatgccatcc gcgatggaat
     1321 cggggcgttc aagaccgttt tcggggtcaa gctggccgac ggacgattgg gttgggaatt
     1381 ctatttctac gactataagc ggcggcagcg cgtggtttcc atgtcacacg tattgcgggc
     1441 gatccatgac tacatgccga cgcgcatcag gccgaacgag agactgccgt atttcatgtt
     1501 ttcgttggac ctgaataatg cgctggtgac cggggccgtg ccgctggacg ttgtgcatat
     1561 gtatattggc aatccgggaa gccaggtctc ctccgggatc gcatacgcga tccgagaaga
     1621 cagcataagc ctggaaaatt tctacttttt ctttgatgcg cgaacccagc tcgcggatgt
     1681 tgcgggtaag atcggcagcg ccgcggtgtt cgatgatacg gtgttgccga tcgatgcggt
     1741 actgcggccg gagctgcgcc gctgccaaac gatatgtctg gcaaacaagc aaagccacga
     1801 ctgcatctat ttctcaggtg ttgatgtcga tcaattacag tggttcctgg actggcaaca
     1861 gtatccgccg gaggtgacgg cgtttatacg gacgaatcgg tcgaatctgg atcatctgct
     1921 gttcgacgtg gggtttgatt accggatggt gggtgaccgc ctgcttgtga tcaaaagcgg
     1981 ttactacggc gtcttctagc ggtccgatcc cgacagaagc atccccatgc cgtcgagtga
     2041 atcataccaa tcgcccttga tgttgaccta tcggcaccgc cgtgcaaccg taatgacgag
     2101 cgcaggctcg ccatccatgc ctttgtttcc gctcgtaaaa ggcgtggata ccggcatgcg
     2161 ccggcatgac ggacggggtc aaccgaagag tctgcatcaa tgccggttgg tatcagccca
     2221 caaaatcaaa ggctggtagt tcaaattggc tggcactatc cgtctgattt gaaccaccgg
     2281 caacgcgtca cggaattgtg atgcttcagt cctggtttga agtaatccga ttcgcgcgat
     2341 gtttcgtggt tgcgtcacgg ctc
//
LOCUS       DATAVD010000350         3720 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_218658, whole genome shotgun sequence.
ACCESSION   DATAVD010000350 DATAVD010000000
VERSION     DATAVD010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3720
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218658"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..243)
                     /locus_tag="VHX39_06525"
     CDS             complement(<1..243)
                     /locus_tag="VHX39_06525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX3990809.1"
                     /translation="MPKITFIEHNGTPHTVSVAVGKSVMQAAVDNNVPGIDADCGGEC
                     ACATCHVYVEAAWLPIVGLPAAGSQEASMLSFAAVTQ"
     gene            complement(314..1537)
                     /locus_tag="VHX39_06530"
     CDS             complement(314..1537)
                     /locus_tag="VHX39_06530"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3990810.1"
                     /translation="MIHDRIIIAGAGHAGGSAAAMLRQLGWKTGITLVGEEPLPPYQR
                     PPLSKAWLTGEADADSLALRPLGFYNDADIELKLCTSVTKIDPAEHKVTFSDGDTMHY
                     AHLILATGSRARRIPLPGIDQANVLELRTAADADKLKAALGPGKRLAVVGGGYIGLEA
                     AASGRALGADVTIIELMPRVLARVACETLSTFFQDFHRSQGVTIELGAGVQALEGNGT
                     VTGVRLADGRVIPCDAALIGVGGVPNEELARDAGIACDGGIVVDLDARTSDPDIFAIG
                     DCTKRPLPLYNRTMRLESVPNALEQAKQAASAICGRPQPPPEVPWFWSDQYDLRLQIV
                     GIPFDATEVVIRGDISAGKFALFHLTADGTVQAVEAVNASTEFMGGRRIIQRRRKLTA
                     ARIADPAVTMQELAS"
     gene            complement(1540..3282)
                     /locus_tag="VHX39_06535"
     CDS             complement(1540..3282)
                     /locus_tag="VHX39_06535"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3990811.1"
                     /translation="MAVERMLTEAEPAAELVGRVLHEAGIEYVFGISGGHTGRIVSGL
                     AKYQNSVKMMMVREESLAGVMAEVYGRLTRRPGVLIGQGPWVLGNGLIGTMEAYLSSS
                     PMLLLTDFSDATGFHLHAPYQQATGDYGSWDARRAFSGVTKQVMQAHEPVAAVQATQL
                     AIKHAMAGQPGPVAVLFAQDALGGKVEMDARPVLYPTRHYLPPAPPPADTDAVEAAAD
                     ALLAAKNPVVIAGNGVRIAQGYDALHALAEAAGLPVCTTAAGKGTFAETHPLALGVFG
                     TFGTPAANACLAEADLILAIGTKLGPSDTAWENKDLLDPTRQTFIQIDVEPKNASWNF
                     PAEHVLIGDATVVLRQLLRAVEAKSAGPRRAGAVRRVAAWRAEKGYFNDPKYLSDEAP
                     LLPQRVIGEIAKALPPEGIVTCDAGENRILMTHYYQTKKAGGFLQAAGSGPMGFAIPA
                     ALAAKLVNPNSPVVAVCGDGGFAMTMNGLMSAIEHDIPITVVIFNNNALGWVHHGAGP
                     FAAEFKDFDHAAIARAMGCEGERITEPVALAPALKRAIASRVPTVLDVRTSMSVSFRD
                     ITSPLADAASPRRR"
     gene            complement(3348..>3720)
                     /locus_tag="VHX39_06540"
     CDS             complement(3348..>3720)
                     /locus_tag="VHX39_06540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990812.1"
                     /translation="WDNLGGGFPFEPILAEMRALGFNPPQAPSVGASRVDAMHELWAG
                     AGLQAVETREITVSRTFTDFEDFWSQSTLTGSTRPMIAAMQPDDIERVKARVRARMTA
                     DAQGRITHSARANAIKGRVPE"
BASE COUNT          657 a         1179 c         1213 g          671 t
ORIGIN      
        1 ctgagttact gccgcgaaac tcagcatgct ggcttcctgc gaaccggcgg ccggcagacc
       61 gacgatcggc agccaggcgg cctcgacata gacgtggcag gtggcacagg cgcactcccc
      121 gccgcaatcg gcatcgatac ccgggacatt gttatccacc gcggcctgca tgacggattt
      181 accgaccgca accgacaccg tgtgtggggt cccgttgtgt tcgatgaagg taatcttcgg
      241 catgagcgct ccctgggctg gcttatccga cggttataag cagaattcgg cgggcggcgc
      301 cacgtccgat gagtcaggag gccagttcct gcatggtcac ggccggatcg gcaatccggg
      361 cagcggtcaa cttcctgcgg cgctggatga tccgccgtcc gcccatgaat tcggtggagg
      421 cattgaccgc ctcgacggcc tgaacggtgc cgtccgcggt cagatggaac agggcgaatt
      481 tgccggctga gatatcgccg cggatgacga cttcggtggc gtcgaacgga atgccgacga
      541 tttgcaggcg cagatcgtat tgatcggacc agaaccaggg cacttcgggc ggcggctgcg
      601 ggcggccaca aatcgccgag gccgcttgtt tggcttgttc cagcgcgttc ggcacgcttt
      661 ccagccgcat ggtgcgatta tacagcggca acggacgctt cgtgcagtcg ccgatggcga
      721 agatgtccgg atccgaggtg cgggcatcca gatcgacgac gatgcctccg tcgcaagcga
      781 tgccggcatc gcgggcgagt tcctcgttgg gcacgccgcc gacgccgatc agagcggcgt
      841 cacagggaat gacccggccg tcggccagcc gcacgccggt gacggtacca ttgccttcca
      901 gtgcctgcac gccggcgccc agttcgatgg taacgccctg ggaacgatgg aaatcctgga
      961 agaatgtcga cagcgtctcg caggcgacgc gggcgagaac gcgcggcatc agctcgataa
     1021 tcgtgacatc cgcaccaagc gcgcggcccg atgcagcggc ttcgagtccg atataaccgc
     1081 cgccgacaac ggcgagacgc tttcctgggc cgagggccgc ctttaacttg tcggcatcgg
     1141 cggcagtgcg cagttccagc acattcgcct ggtcgatccc cggcaatgga atacgccggg
     1201 cgcgggaccc ggtggcgagg atcagatgcg cgtagtgcat ggtatcgccg tcgctgaacg
     1261 tcaccttgtg ctcggcggga tcgattttcg taacgctggt gcacagtttc agttcgatat
     1321 cggcatcgtt gtaaaacccg agcggacgca gcgcgaggct gtcggcgtca gcctccccgg
     1381 tcagccaggc tttcgacaat ggcgggcgct ggtagggcgg cagcggttcc tcacccacca
     1441 aagtgatgcc ggttttccag cccagttgac ggagcatggc ggcagcggag ccgccggcgt
     1501 ggccggctcc ggcgatgatg atgcgatcgt ggatcatggt cagcggcgcc tcggtgaagc
     1561 agcatcggca aggggcgagg taatgtcgcg gaacgacacc gacatcgagg tgcgcacatc
     1621 cagcacggtc ggcacgcgag acgcgatggc gcgtttcaat gccggggcga gtgctacggg
     1681 ttcggtgatc cgctcaccct cgcagcccat ggcgcgcgcg atggccgcgt gatcgaaatc
     1741 cttgaattct gcggcgaacg ggccggcgcc gtggtgcacc caaccgagcg cgttgttgtt
     1801 gaagatgacg acggtgattg gaatgtcgtg ttcgatcgcg ctcatcaggc cgttcatggt
     1861 catggcgaag ccgccgtcgc cacagacggc aacgaccgga ctgttcgggt tgaccagttt
     1921 ggcggcaagg gccgcgggaa tggcgaaccc catcggtccg gagccggccg cctgcaggaa
     1981 cccaccggct ttcttggtct ggtagtaatg cgtcatcagg atgcggtttt ccccggcgtc
     2041 gcaggtgacg atgccctccg gcggcagcgc tttggcaatt tcgccgatga cgcgctgcgg
     2101 cagcagaggc gcctcgtcgg acaggtattt cgggtcattg aagtaacctt tttcggcccg
     2161 ccaggcggcg acccgcctga ccgcgccggc gcgccgaggg ccggcggatt tggcctcgac
     2221 ggcgcgcagc aactggcgca gcacaaccgt ggcgtcgccg atcagcacat gttcggcggg
     2281 aaagttccac gatgcgttct ttggttcgac atcgatctga atgaatgtct gccgtgtggg
     2341 atcgagcagg tccttattct cccacgccgt gtcgcttggc ccgagcttgg tgccgatggc
     2401 aaggatcaaa tcagcctcgg ccagacaggc gtttgccgcg ggtgtgccaa aggtgccgaa
     2461 cacgccaagc gccaaaggat gcgtttcggc aaacgtgccc tttcccgctg ccgtagtgca
     2521 aaccggcagc cccgccgcct ctgccaacgc atgtaacgca tcatatccct gggcgatccg
     2581 cacaccattc cctgcgatga ccactgggtt tttcgctgcc agtaaagcgt cggcggcagc
     2641 ctcgacagcg tccgtatcgg ccggaggtgg ggccggcggc aaatagtgcc gggttggata
     2701 caataccggc cgcgcatcca tttccacctt gccgcccagc gcatcctgcg cgaacagtac
     2761 tgcgaccggc ccaggttggc cggccatcgc gtgcttgatc gcgagttggg tggcctgtac
     2821 cgcggcaacc ggttcgtgcg cctgcatcac ctgtttggtg acgccactga aggctcgccg
     2881 cgcatcccaa ctgccgtaat ccccggtcgc ctgctgatac ggcgcgtgca aatggaaccc
     2941 ggtcgcatcg gaaaaatcgg tcagcagcag catgggcgag gacgagagat acgcctccat
     3001 cgtgccgatc agtccgttgc caagcaccca aggcccctgc ccgatcagta cgccgggccg
     3061 gcgggtcagg cggccgtaca cctcggccat cacgccggcg agggattctt cacgcaccat
     3121 catcattttc acggaattct ggtatttggc caggccggag acaatgcggc cggtgtggcc
     3181 gccggaaatc ccgaacacat actcaatccc ggcctcgtgc agcacgcggc caacgagttc
     3241 ggcggcgggt tcggcttcgg tcagcatccg ttccacggcc attggcgttt cctcctggtc
     3301 aggcggcggg attggagcaa gggaacggcc catgggcaag cggaggacta ttcgggcaca
     3361 cgccccttga tggcattggc ccgcgcgctg tgcgtgatgc gtccctgggc gtccgccgtc
     3421 atccgcgccc gcacccgagc cttcacccgc tcgatatcgt caggttgcat cgccgcgatc
     3481 atgggacgcg tgctgccggt cagtgtactc tgggaccaga aatcctcgaa atcggtgaat
     3541 gttcggctca ccgtgatctc tcgggtttca acagcctgca gtcctgcacc cgcccacagc
     3601 tcgtgcatgg cgtccacgcg cgatgcgccg acgcttggtg cctgcggtgg gttgaagccc
     3661 agagcacgca tctcggccag aatgggctca aacggaaatc cgccgcccag attatcccag
//
LOCUS       DATAVD010000351         3628 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2639966, whole genome shotgun sequence.
ACCESSION   DATAVD010000351 DATAVD010000000
VERSION     DATAVD010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3628
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2639966"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(140..1006)
                     /locus_tag="VHX39_06545"
     CDS             complement(140..1006)
                     /locus_tag="VHX39_06545"
                     /EC_number="3.1.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008495499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3990813.1"
                     /translation="MSTFELVWDARCGVAESPVWDQANRRLLFCDINGKKIHALDVDS
                     GARETWILPEVVGSFGLCRSGRLVVALRHRVVLFDPATQAITELTQAVAEPDTNRLND
                     GKVGPDGAFWVGSMDENLPRQPLGSLYRVTADGRIEKRSEGYAVSNGLAWSPDGRTMY
                     HSDSTAAIIQAWDFDPSTGGMSNHRVIVKLTNEDGRPDGAAMDADGNYWSAGPSAGCI
                     NCFSPTGRLLTKLPFPVPGPTMPAFADEFLYVTSLREGKSPEILAQYPTLGGLFRTPA
                     PAEGAPVSLFAD"
     gene            1115..1783
                     /locus_tag="VHX39_06550"
     CDS             1115..1783
                     /locus_tag="VHX39_06550"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEX3990814.1"
                     /translation="MTEPFAPYQALAGFLLSAFDANEAGGAHDVSHIVRVWRNAVRIG
                     RTEPECDTEILLAASILHDCVAVEKSSPQRPFASRLSAVRAREIVAPLQWTPERVDAL
                     AHVIETHSFSAGQVPETLEAKIFRDADRLDAIGAIGVARCFHIGGRMDGALYHLGDPG
                     AETRPLDDRAYALDHFAVKLFKEARTFLTSEGQRLAAARTQRMADFVTAFRAEIEGAE
                     IEGK"
     gene            1785..2780
                     /locus_tag="VHX39_06555"
     CDS             1785..2780
                     /locus_tag="VHX39_06555"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX3990815.1"
                     /translation="MINAAIVGLGRWGRNLVNSTEGSSALRFTTANSRTRQTAESFCR
                     EKSLLWAADLDAILNDPAIDAVVFATPHSQHPEQVRRAAAAGKHVFVEKPFALSLAEA
                     DEMLDAVAKAGIVLAVGFNRRFSPSMVRLRNAVRGGQLGTISTISAEQTALHGLTLTE
                     AAWRAQPAESPGGAMTPIGVHLVDGMIDLLGPIDHVYAKVNRHAASHADDTTDVLLTF
                     KSGASGHIFCSTAATPHYRMAVYGTGGFAEISGHQMGTYRFVASLTGEAFGAAIPETF
                     ETKGFNLLTAELEALAASIEAGTPFPTPLADIRHGVAVFEAIVRSASSGHAETVG"
     gene            complement(2984..>3628)
                     /locus_tag="VHX39_06560"
     CDS             complement(2984..>3628)
                     /locus_tag="VHX39_06560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004448940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HEX3990816.1"
                     /translation="EGDSAGGSAKQARNRDTQAILPLRGKILNVASASADKLRQNQEL
                     RDLIEALGCGVGDRFDRAKLRYGRVIIMTDADVDGAHIASLLMTFFYRELPELVRYGH
                     VYLAQPPLYRLTQGAKSVYAMDDADLQRKSKSEFKTGAKVEVSRFKGLGEMPPTQLRE
                     TTMDPAKRTLLKVVAAPDERAATADLVESLMGRRPELRFQFIQEHAKTVEELDV"
BASE COUNT          676 a         1139 c         1125 g          688 t
ORIGIN      
        1 ataaaacggc acctcgtcga cgtcacgcag gaagtcgccc ggagcatgac aaaccgggca
       61 acgcgtcccg ctatcctggg ctatcccatc ggcggctgcg cggtcatggc aaacatgctc
      121 cgctcaaccc accggcaggt caatcggcga acaaactgac cggggcacct tcggccggag
      181 cgggcgtgcg gaacagtcca cccaatgtgg ggtattgggc caggatttcg ggcgatttgc
      241 cctcgcgcag cgaggtcacg tacaggaact cgtcggcgaa agcgggcatt gtcggaccag
      301 gcacgggaaa cggcagtttg gtcagcaatc ggccggtggg cgaaaaacaa ttgatgcagc
      361 cggccgaggg gccggccgac caatagttgc cgtccgcatc catcgctgca ccatcgggac
      421 ggccatcctc gtttgtcagt ttgacgatca cccggtggtt gctcatgccg ccggtcgagg
      481 gatcgaaatc ccacgcctgg atgatcgcag cggtggaatc ggaatgatac atcgtgcgcc
      541 cgtcgggcga ccaggcgaga ccgttggaca cggcgtagcc ctcggatcgc ttctcgatcc
      601 ggccatcggc ggtgacccgg tatagcgagc caagcggctg gcgtggcaag ttctcgtcca
      661 tactgccgac ccagaatgcg ccatccggcc cgactttgcc gtcgttcagc cggttggtat
      721 ccggctcggc aacagcctgt gtcagttcag tgatcgcctg cgtcgccggg tcgaacagca
      781 cgacacgatg gcgcaatgca acgaccaggc ggccggagcg gcacaggcca aaactgccga
      841 cgacctcggg caaaatccag gtttcgcggg cgccgctgtc cacatcgagc gcatgtattt
      901 tcttgccgtt gatatcgcaa aacaacagtc gccggttggc ctgatcccag accggggact
      961 ccgcgacgcc gcaccgtgca tcccagacga gttcaaatgt gctcatggcg ttccctctgc
     1021 caggctttgc cggcctgggc acgatacggg cgagacgcag cggcagcaat gcagtatggc
     1081 agagcgtcgg caaaccctgc gggagaactt tcggatgacc gaaccgtttg caccgtatca
     1141 ggcgctcgcg ggttttctgt tgagcgcgtt tgacgcaaac gaagccggtg gtgcacatga
     1201 tgtgtcgcac atcgttcggg tctggcggaa cgcggtgcgc attggccgga ccgaacctga
     1261 atgcgacacc gagattttgc tggccgcttc gatcttgcat gactgcgtgg cagtggaaaa
     1321 aagctcgccg cagcgcccat ttgcctcgcg cttgtccgcc gttcgggcgc gcgagatcgt
     1381 cgcgccattg caatggacgc cggaacgcgt ggatgcgttg gcgcacgtca tcgagacgca
     1441 cagtttctca gcaggccaag tgccggaaac gctggaggca aagattttca gagacgccga
     1501 ccgactcgat gcgatcggcg cgattggtgt cgcgcggtgc tttcatatcg gtggcagaat
     1561 ggatggtgcg ttgtatcatc tcggcgatcc gggagccgaa actcggccct tggacgatcg
     1621 tgcctatgcg ctggaccatt tcgccgtgaa actgttcaaa gaggccagga cgtttctgac
     1681 ctcggagggt cagcgtttgg ctgcagcacg tactcagcgc atggcagatt tcgttactgc
     1741 gtttcgcgcc gagatcgaag gggccgagat cgaagggaaa tgaaatgatc aatgcggcga
     1801 ttgtcggcct cggccggtgg ggacggaacc tggtcaacag cacggaaggc agctcggcac
     1861 tgcgctttac cactgcgaat agccgtaccc ggcaaaccgc agagtcattc tgccgcgaaa
     1921 aatccctgct ctgggcagca gatctggacg caatcctgaa tgacccggcg atcgacgccg
     1981 tggtgtttgc gaccccgcat agccagcatc cggaacaggt ccgacgcgcc gcggcagccg
     2041 gcaagcacgt cttcgtggaa aaacctttcg ccttgtccct ggccgaagcc gacgagatgc
     2101 tcgatgccgt tgccaaggcc ggcatcgttc tggcggtggg cttcaatcgc cggttcagcc
     2161 cctcgatggt ccgtctgcgc aatgccgtac gcggtggcca gcttggcacc atcagcacga
     2221 tcagtgccga gcaaaccgcc ctgcacggtt taacgctgac cgaagccgca tggcgtgcgc
     2281 aaccggctga gtcgccgggc ggcgcgatga ccccgatcgg agtccacctg gttgacggca
     2341 tgatcgattt gctcgggcca atcgatcatg tgtacgccaa ggtcaaccgc catgccgcga
     2401 gccatgctga cgataccacc gatgtgcttt tgacgttcaa aagcggtgcg agcggccaca
     2461 tcttctgctc gaccgctgcg acgccgcatt atcgaatggc ggtttatggc acgggcgggt
     2521 ttgcggagat ttccgggcat caaatgggca cgtaccggtt tgtcgcctcg ctgacgggtg
     2581 aagcattcgg tgccgccatt cccgaaacat tcgaaaccaa aggcttcaac ttgctgactg
     2641 ccgaacttga agcattggcc gcgagcatcg aagccggcac gcccttcccc accccgctcg
     2701 ccgatatcag gcacggcgtg gcggtgttcg aggcgattgt gcgatcggcc agctccgggc
     2761 atgcggagac cgtcggctag cgatccggtc ggctccggca acttgagtgg cttcttggct
     2821 cgaccgtctg ggccaggccg ccccgcgagc tgttcgccag cacgcccgcg accgaagcgc
     2881 ctgccacccg catcagttgg cgctgtcggc aggcgtttac gtcgctgcgg gcatcacctg
     2941 ttgccgccag ccggaaccac tcatcccggt catggctcag aaatcagacg tccagctctt
     3001 cgactgtctt cgcgtgttcc tgaatgaact ggaaccgcag ttccggccgc cgccccatca
     3061 ggctttcaac cagatcggcg gtcgcggctc gctcatccgg tgccgccacg actttcagca
     3121 gcgtgcgttt tgccggatcc atcgtcgtct cccgcaattg cgtcggcggc atctcgccca
     3181 gtcctttgaa gcggctgacc tcgaccttgg caccggtttt gaactcggac ttcgacttgc
     3241 gttgcaggtc ggcgtcatcc atcgcataga ccgatttcgc accctgggtc agccggtaca
     3301 gcggcggttg cgccaaatag acgtgtccgt atcgcaccag ttccggcagc tcgcggtaaa
     3361 agaacgtcat cagcagcgag gcaatgtgcg cgccatcgac gtcggcgtcc gtcatgatga
     3421 tcacgcgccc gtaacgcaat ttcgcccggt cgaagcgatc gccgacgccg caacccagag
     3481 cctcgatcag atcgcgcagt tcctggtttt ggcgaagctt gtcggccgag gctgaggcca
     3541 cgttcaagat cttgccgcgc aatggcagaa ttgcctgggt gtctcggtta cgcgcctgct
     3601 tggcggagcc tcccgcgctg tccccctc
//
LOCUS       DATAVD010000352         2006 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1709574, whole genome shotgun sequence.
ACCESSION   DATAVD010000352 DATAVD010000000
VERSION     DATAVD010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1709574"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1204)
                     /locus_tag="VHX39_06565"
     CDS             complement(<1..1204)
                     /locus_tag="VHX39_06565"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011251680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEX3990817.1"
                     /translation="MRLTQGFIPTIKETPNEAQIASHRLMLRAGLVRQTSAGIYAWLP
                     LGLRVLHNIERIVREEQDASGAQELLMPTIQSADLWRESGRYDDYGAEMLRIRDRHER
                     DMLYGPTNEEVITDLFRQSVRSYRELPKILYHIQWKFRDEVRPRFGVMRGREFLMKDA
                     YSFDLDHAGAVVSYRKMMLAYMRTFQRLGLKAIPMVADTGPIGGDLSHEFIILAPTGE
                     SQVFYDAAFEEIDFLSGGAGGFSHDSAPDLERFFREMTSHYAATDEKHDTAKWDQVAA
                     ERRREGRGIEVGHIFNFGTKYTKAMNATVTGADGSQVFPEMGSYGIGVSRLVGAVIEA
                     SHDDAGIVWPDSIAPFRAAILNLKVGDAACDALCARLYEALGADALYDDRDDRAGVKF
                     NDADLMGHP"
     gene            complement(1650..1913)
                     /locus_tag="VHX39_06570"
     CDS             complement(1650..1913)
                     /locus_tag="VHX39_06570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1467 family protein"
                     /protein_id="HEX3990818.1"
                     /translation="MNWFTGIMLYILIWWVALFAVLPIGTHAVEQPDETSGWRGAPAR
                     PRIWMKVAVTTIVACVIWLAAFALIESDWISFRHGYFAAPKIY"
BASE COUNT          403 a          614 c          592 g          397 t
ORIGIN      
        1 agggatgccc catcagatcg gcgtcattga atttaactcc ggcgcggtcg tcgcgatcat
       61 cgtacagcgc atcggcgccc aatgcctcgt acaacctggc gcacagtgca tcgcaggcgg
      121 cgtcgcccac tttcaggttg aggattgcag cgcggaatgg ggcgatggaa tccggccaga
      181 cgatgccggc gtcatcgtgg cttgcctcga tcaccgcgcc aaccaggcgg gacacgccaa
      241 tcccgtagct gcccatctcg gggaatactt gtgagccatc cgcaccggtc accgttgcgt
      301 tcatcgcttt ggtgtatttg gtgccgaagt tgaatatgtg gccgacttcg atccccctgc
      361 cctcgcgccg ccgttcggct gcaacctgat cccacttcgc ggtatcgtgc ttctcgtcgg
      421 tcgcggcgta gtgggaggtc atttcccgga agaaccgctc cagatcgggc gcgctgtcgt
      481 gactgaaccc gccggcgcca ccggacaaaa agtcgatttc ctcgaaggcg gcatcgtaga
      541 acacctggct ttcgccggtc ggcgccagaa tgatgaactc gtggctgaga tcgccgccga
      601 tcggtccggt atcggccacc atcgggatcg ccttcaggcc aagacgctgg aaggtccgca
      661 tgtaggccag catcattttg cggtaactga ccaccgcgcc ggcgtgatcg aggtcgaacg
      721 aataagcatc cttcatcagg aattcccgcc ctcgcatgac gccaaaccga ggccgcacct
      781 cgtcgcggaa cttccactga atgtgataaa gaattttcgg cagttcgcga tagctgcgca
      841 ccgactgacg gaacaggtcg gtgatcactt cctcattggt cggcccatac agcatatcgc
      901 gctcatggcg gtcgcgaatg cgtagcatct cggcaccgta atcgtcgtag cggccgcttt
      961 cccgccagag gtcggccgat tggatggtcg gcatcagcag ttcctgcgca ccggaggcat
     1021 cctgttcctc gcgcacgatc cgctcgatgt tgtgcaggac ccgcaagccc agaggcagcc
     1081 aggcgtagat gcctgccgag gtctggcgca ccaggccggc ccgcagcatc agacggtgcg
     1141 aggcaatctg tgcctcgttc ggtgtctcct tgatggtcgg tatgaaaccc tgggtcaggc
     1201 gcatcggtgg ttcgattccc gtttggtcag tgggcccgtt tagtcagtgg gcggggcgga
     1261 ccctaggcgg agttgcgcgc tttgtcacac cacaggcttt gcgcgcagcc tgcgttgagc
     1321 ttcggacgtt atcgccgtcc ggtctgttca gcaggcggga agccaatcca cgtacgggat
     1381 cgtttgtcgg attaaagaca acccatgcat tccatgaaac atgcccacga aattattgtg
     1441 caatgcacaa gagaattctg aaataataag ccaaattctg gcgaataaac ggtcgaaccg
     1501 tagtgacaaa tggatgtcat ttggttaaca cagcgacggc ccagattggc gcttacgggg
     1561 gccaggtttg gggaggaaac ggcaaccgcc cgccaggctg aggatgatct ttccctcgcc
     1621 tggcagaggc ggttgtagca tttctacgat cagtaaattt tcggcgccgc gaaatagccg
     1681 tggcgaaagc tgatccagtc gctctcaatc aacgcaaacg ccgcgagcca gatcacgcag
     1741 gcgacgatcg tggtcaccgc aaccttcatc catatccgcg gccttgccgg ggcaccgcgc
     1801 cagccggacg tttcgtcggg ctgttcgacc gcgtgcgtcc cgatgggaag cactgcaaac
     1861 agcgcgaccc accagatcag aatgtaaagc atgatgccgg tgaaccagtt catcgcccgc
     1921 cggagccccc gatcaacccc tcctgggctt tgccacggtg ctcgggtctg caggcccaga
     1981 ccaaatcaaa cccgaagcaa atggac
//
LOCUS       DATAVD010000353         2652 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1335805, whole genome shotgun sequence.
ACCESSION   DATAVD010000353 DATAVD010000000
VERSION     DATAVD010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2652
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1335805"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            359..2263
                     /locus_tag="VHX39_06575"
     CDS             359..2263
                     /locus_tag="VHX39_06575"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX3990819.1"
                     /translation="METAHHKIGLGRLPFRAAGFVALVCVAILGLSATREWSAREAAL
                     KAAEVDQANLARSLTQQAEDSFDFLDTSILGAVSRLETDGTGPATLSKLRDILVARKA
                     ASKRVSGLAIVDEHGNWLASSGAMGKNLSDREYFQHHRQSTERTVFIGRPVTSSMNGE
                     SVITLSRRFNHPDGSFAGIVITSIGSAYFAEFYSQFDIGASGTVSLVSNDGIILARVP
                     DNAANVGRDVSDGPIFNAIRSGGVSGAHYLKSYLDGSERIGFHQKSSRYPFVVLVTRT
                     QDEVLAPWRHATITRMAIVLGLVVLIAVMGFYLVRQLLRGQHMAAALASKEANFRVVA
                     EGSSDMVTRVGLDERIYYASPSSVRIVGWQPDQLVGTPALAGVNPLDLPRVQEVVAAL
                     KRGEIEETRITYRTRHRERSEIWVESTLRVTRNSGEIDGVVVITRDVTQQKKLEGKLE
                     TLATVDGLTGLANRRRFDERLLEEWGRAYRERTNLSLLMIDLDHFKAYNDQYGHPAGD
                     ECLRAVAHVLAAEAKRTTDLAARYGGEEFALLLPNTDAAGCRRIGERVLREIRDLGIA
                     HRLNFPSRIVTASLGGAICRPGVERSAGHASLVEAADHALYAAKDHGRNQVMMAKSGA
                     RKLETLSSAH"
     gene            complement(2349..>2652)
                     /locus_tag="VHX39_06580"
     CDS             complement(2349..>2652)
                     /locus_tag="VHX39_06580"
                     /inference="COORDINATES: protein motif:HMM:NF016028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HEX3990820.1"
                     /translation="AAGAANVSCSTSASRSATGCGSGKCNGHPMSDEKALGNRIDALE
                     AKLMFQEETIETLNKTITQQWQKIDALTRQVLSLSERLQEAEANAPGPANERPPHY"
BASE COUNT          485 a          811 c          836 g          520 t
ORIGIN      
        1 tcaatcatcc cgccaacgat tctccgcgta gcggcagttc gaagcaggtg acacccgtgt
       61 tgtggtgtgc cgtcgtggtg gcggccgttg ccgtggcaac gtggttcgcg gtcgggctat
      121 aggccccggg tagaacgcag cgtgatcgac ggttcggctg gctggcgcct ggcgcggcgg
      181 cctcctcccg catgggcgct atgcgtaatc ctttgcacac cataccgccg attggcggtg
      241 tcgtcggatg cccgtaatac tacggaatta cccgtagaat gacgtgcttc ggaagcttca
      301 cttcagagat aaataagatg tgcatgggag cttccgccgt tcggagaatc cctgctggat
      361 ggaaaccgcg catcacaaga ttggcttggg ccgcctgcct ttccgggcag cgggtttcgt
      421 tgccttggtt tgcgtagcca ttctcgggct cagcgcgacg cgcgagtgga gtgcgcgaga
      481 agccgccttg aaggctgcgg aagtcgatca ggccaatctc gcacgctcgc tcacccagca
      541 agccgaggac agcttcgact ttctggacac cagcattctt ggcgccgtaa gccggctcga
      601 aaccgatgga acaggtccgg caacgctgtc aaaactccgg gacattctgg tggcgcgcaa
      661 ggcggcctcc aagcgcgtca gcgggctcgc tatagtcgac gaacacggca actggctcgc
      721 atcgtcgggc gccatgggga aaaacctcag cgatcgcgaa tatttccagc atcaccggca
      781 atcgaccgag cgcaccgtgt tcatcgggcg gccggtgacg agcagcatga acggtgaatc
      841 ggtgataacg ctttcgcggc gcttcaatca tcctgacggc agctttgccg ggatcgtgat
      901 tacgagtatc ggctccgcgt attttgcgga attctattcc caattcgaca tcggcgcgag
      961 cggcaccgtc tcgctggtct ccaacgacgg aattattctg gcgcgcgtcc cggacaacgc
     1021 cgccaatgtc ggccgcgacg tgtcggacgg gccaattttc aacgccattc gctccggcgg
     1081 agtctcgggc gcgcactatc tcaaatccta tctggatggg tcggagcgta tcggctttca
     1141 ccagaaaagc agccgctatc cctttgtcgt cctggttacc aggacgcagg atgaggtatt
     1201 ggcgccttgg cgtcacgcca ccatcacccg catggctatt gttctcggcc tggtcgtgct
     1261 gatagccgtc atggggttct acctcgtccg gcaattgctg cgaggccagc acatggcggc
     1321 ggcgctggcc tccaaggaag ccaattttcg cgtggtggcg gaaggctcca gcgacatggt
     1381 gacccgcgtc gggctggatg agcggatcta ctatgcttcg ccgtcatccg ttcgcatcgt
     1441 cggctggcag cccgatcaac tggtcggaac gcccgcactg gcgggtgtca acccgctgga
     1501 tttgccccgt gtccaggagg tcgtcgcagc gctgaagcgc ggcgagatcg aggagacgcg
     1561 catcacctat cgcacgcggc atcgggaaag atccgaaatc tgggtggaat ccaccctgcg
     1621 cgtgacgcga aacagcggcg agatcgacgg cgtcgtcgtt atcacgcgcg acgtcacgca
     1681 acaaaagaaa ctggaaggaa agctggaaac gctggcgacg gtggacggtc tcaccggcct
     1741 cgccaatcgc cgccgcttcg acgagcgcct gctcgaggaa tggggacggg cctatcgcga
     1801 gcgcaccaac ctgtcgctgc tgatgatcga tctcgatcat ttcaaggcgt acaacgacca
     1861 gtacggtcat ccggcgggcg acgaatgcct gcgtgccgtc gctcatgtcc tggcagcgga
     1921 ggccaaacgc accacggatc tcgcggcgag atacggcgga gaggagtttg cgctgctgct
     1981 gcccaatacc gatgcggccg gatgcaggcg catcggcgaa agagtgttgc gcgagatccg
     2041 ggatctcggc atcgctcaca ggctgaattt tccgtcgcga atagtcaccg cgagcttggg
     2101 cggggctata tgccgtccgg gcgtcgaacg ctcggcgggc cacgcctcgc tggtcgaggc
     2161 cgccgaccac gcgctctatg ccgccaagga tcacgggcgc aatcaggtga tgatggcaaa
     2221 atcgggagcg cggaagctcg agaccctgtc ctccgcgcac tgaagggcgg ttgagatttc
     2281 gatcgccggt ccctgtttga gcgtgcccgt atcaggaaaa cctgttccaa ctttagggac
     2341 catgcgcgct agtaatgcgg cggccgctcg ttcgcggggc cgggcgcatt ggcttccgcc
     2401 tcctgcaggc gttcgctcag actcaggacc tgccgcgtca gcgcatcgat cttctgccat
     2461 tgctgggtga tggtcttgtt cagcgtctcg atggtttctt cctgaaacat cagcttcgcc
     2521 tcgagcgcat cgatacggtt gccaagggcc ttttcgtcac tcatcggatg gccgttgcat
     2581 ttgccgctcc cgcaacccgt ggccgagcgc gacgcgctcg tcgaacacga aacattcgcc
     2641 gcgccagcgg ct
//
LOCUS       DATAVD010000354         1698 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2824906, whole genome shotgun sequence.
ACCESSION   DATAVD010000354 DATAVD010000000
VERSION     DATAVD010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2824906"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..338)
                     /locus_tag="VHX39_06585"
     CDS             complement(<1..338)
                     /locus_tag="VHX39_06585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990821.1"
                     /translation="MSGTTLSGTYTSGVTLLTNPTTIAATGNVSNTTTSGIAVSGPAG
                     TVWTLTNQGLVSETASGGIGVSFAQSGTVINATGGMITAAGDGVLLNGGGYVTNASGG
                     TITGALGVDA"
     gene            complement(891..1559)
                     /locus_tag="VHX39_06590"
     CDS             complement(891..1559)
                     /locus_tag="VHX39_06590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEX3990822.1"
                     /translation="MRDAEAFIRANTVLATAPHVPEIRLHLATEITPIWQATETWMVE
                     QGVEPPFWAFAWPGGQALARHVLDHPAPVAGKRVLDFAAGGGIAAIACVMAGAATVEA
                     AEIDPLALAAIGLNAAVNGCDLVQARDVVGAACRWDLILCGDVCYEAPMTGHIMPWLT
                     DMARTADVWIADPGRAYLPKSGLTRFATYQIETTLELEDRVSRDVAIYRFVSTEDRMA
                     GRSW"
     gene            complement(1556..>1698)
                     /locus_tag="VHX39_06595"
     CDS             complement(1556..>1698)
                     /locus_tag="VHX39_06595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019091611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HEX3990823.1"
                     /translation="LALPAVLLGRQVVTLDIDDPAGCLRLFRANREVGLAVGLAILVG
                     WF"
BASE COUNT          337 a          565 c          494 g          302 t
ORIGIN      
        1 ttcgcatcga cacccagggc gccggtaatc gtgccgcccg aagcgttggt gacgtaaccg
       61 ccgccgttca gcaggacgcc gtcgccggcg gcggtgatca tgccaccggt cgcgttgatg
      121 acggtaccgg attgggcgaa gctgaccccg atgccgccgc tcgccgtctc gctgaccagc
      181 ccctggttgg tcagcgtcca cactgtgcca gcggggccgg acaccgctat gccgctggtt
      241 gtggtgttgc tgacattgcc ggtcgccgcg atcgtcgtcg ggttggtcag cagcgtcacg
      301 ccactggtgt aggtgccgct gagtgttgtt cctgacacga tctctccttg actccaatcg
      361 cacggcgtca gcgcctgccg ggcaggcttg ccgtgctgta tcgcaaaatt tctagcgtcg
      421 aatggttgaa gggcgcaaga ttttataact gttacgttac ataatttatc aagtatcact
      481 tgtaatgatt tcggtcggcg accgtgactg gcaatgacgt cccgaacgcg agacgacgca
      541 ctctcgattc gacaaaattg agactaattc gaaggaattt gatctgatcg tcggcgaggc
      601 gaacatcatg gcgcgggaac acgtgggcat cgttttatta tggagcgact accgccaatt
      661 tgatacgatg acagaccatg taaggagaaa gcatcatcgc gcatgggata tgattgttaa
      721 atgataacga aaatgcacat aaaccggcct tatggcggcg agccagccga ccaactggag
      781 catcgaccga tccgcgggac aagccgaccc gcataattgc catccgtcac ccctcggtta
      841 tcgcatgatt tctcggggca gaaaccacac gccattcaag cacaggctga tcaccatgaa
      901 cggcccgcca ttcgatcctc agtcgataca aaccgataga tcgccacatc acggctgaca
      961 cggtcctcca gttccagcgt cgtctcgatc tggtacgtcg cgaaccgcgt cagcccactc
     1021 ttcggcaaat acgctcggcc cggatcggcg atccagacgt cggcggtccg ggccatgtcc
     1081 gtcagccacg gcatgatgtg cccggtcatc ggcgcctcgt agcaaacgtc accgcacagg
     1141 atcagatccc accggcaggc ggcgccgacc acgtcgcgcg cctgcaccag gtcgcaacca
     1201 ttgaccgctg cgttcagccc gatcgcggcc agcgccagtg ggtcgatctc ggccgcctcc
     1261 accgtcgccg cgccggccat gacgcaggcg atggccgcga tcccgccacc ggcggcgaag
     1321 tccagcacgc gcttgccggc gaccggcgcc ggatgatcga ggacatgacg cgccagcgcc
     1381 tgccctccag gccatgcgaa ggcccagaac ggcggctcga ccccctgctc gaccatccag
     1441 gtttccgtcg cctgccagat gggcgtgatc tcggtggcga gatgcaaccg gatctccggc
     1501 acatgcggcg cggtggccag aacggtgttg gcgcgtatga aagcttcggc gtccctcaaa
     1561 accagcccac caggatcgcc agcccgaccg ccagcccgac ctcccggttc gctcggaaca
     1621 gccgcaagca ccccgccgga tcgtcgatgt ccaaggtcac gacctgccgc cccagcaaca
     1681 ccgccggcag cgccaacg
//
LOCUS       DATAVD010000355        11314 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2266769, whole genome shotgun sequence.
ACCESSION   DATAVD010000355 DATAVD010000000
VERSION     DATAVD010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 11314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11314
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2266769"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..670)
                     /locus_tag="VHX39_06600"
     CDS             complement(<1..670)
                     /locus_tag="VHX39_06600"
                     /inference="COORDINATES: protein motif:HMM:NF017730.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     large subunit"
                     /protein_id="HEX3990824.1"
                     /translation="MNDSSSAIEEIIAATAPPDGGVATPEPASPDLRGAILSGRFLGL
                     RDYALEDALTGFLAAENDAALAHWLPQGWTGSADDVRGLLDRDIVAIDAMLSEQLDAI
                     LHHDRVRRLEGTWRGLAWLVGGIESGSRLKTKILNIGWGEICRDLERAVEFDQSNLFR
                     KIYEEEFGMPGGEPYGLMIVDHDIRHRAGPNSRTDDVSALAALAGVAAAAFCPTLVGA
                     SPVLL"
     gene            complement(705..2198)
                     /gene="tssC"
                     /locus_tag="VHX39_06605"
     CDS             complement(705..2198)
                     /gene="tssC"
                     /locus_tag="VHX39_06605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033104 - type VI protein secretion
                     system complex [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     large subunit"
                     /protein_id="HEX3990825.1"
                     /translation="MSGAQTATQTAGAEAAEGVSILDQVVAATKQTAPDATQDLMKNL
                     VEQAMSGTVTFDKNISRTFERAIAAIDQKLSEQLNAIMHDPKFLKLEGSWRGLHYLIM
                     NSETSTTLKIRLLNASKRDLSRDLQRAVEFDQSQLFKKIYENEFGTPGGEPYAALIGD
                     YEWTQHPDDIETLRLISNVAAGAFAPFISAAGPGMFGFDSYTELAKPRDLAKIFETSD
                     YMKWRSFRDSEDARFVSLVMPRTLARLPYGAATKQIDEFNYEEAPFDAAGAAKPMDHG
                     EYCWMNAAYAMGTRLTDAFAQYGFCTAIRGAEGGGKVENLPTHVFTSDDGDMDAKCPT
                     EIAITDRREFELSNLGFLPLCHYKNTDYSVFFGAQTAQKPKKYDRPEATANAAISARL
                     PYIMASSRFAHYLKVMARDKIGSFMEASDVERWLNRWILNYVNSNEQAGQETKARYPL
                     REAQVRVQEIPGKPGSYNAVAYLRPWLQMEELTTSLRMVARIPAASG"
     gene            complement(2201..2710)
                     /gene="tssB"
                     /locus_tag="VHX39_06610"
     CDS             complement(2201..2710)
                     /gene="tssB"
                     /locus_tag="VHX39_06610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system contractile sheath
                     small subunit"
                     /protein_id="HEX3990826.1"
                     /translation="MSASIHSKLDRVRKPRVHITYDVETEGAAIVRELPFVMGVMGDF
                     SGDPTAPLQSMTDRKFVQIDRDNFNDVMARMNPGLKLRVDNKLSEAGGQMAVDLKFNA
                     IEDFEPARVAQQVPALRALMETRAKLRDLMSKVDRSEELEGLLEKVLQNENELKTLSG
                     QLGIEPKEG"
     gene            complement(2916..4037)
                     /gene="tssA"
                     /locus_tag="VHX39_06615"
     CDS             complement(2916..4037)
                     /gene="tssA"
                     /locus_tag="VHX39_06615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system protein TssA"
                     /protein_id="HEX3990827.1"
                     /translation="MRMVDFPDGFDLAALLEPIPGDAPQGVDIREDFSSQSPYNRLRD
                     ARSDARDAEKMIDNGDPNAGDPTPSWRIVRDVGLKTLQEAAKDLEVAAWVTEAYVRSH
                     GLVGLYAGASLIKGLAEQYWDGIFPLPDDYGVETRVAPLTGLNGRDGGGSLIQPLYKL
                     HFFDRRDGTPVTFFTYQSSEQLPALPAERRDARIAAGAVPWDDMENEARAAGAAMARL
                     RDQSAAALEAWEGMASVLDEKASEDPPSTSHVRDMLRHIHTVAIRYAPAATEQPEEAT
                     SEPTAAASDATATPGAPGPAGFSAGARTVSRDDALKTLETIATFFRRTEPASPLAYTL
                     DDAIRRAKLTWPELLEEVVPDISVRQAILTSLGIRPASE"
     gene            4183..6834
                     /gene="tssH"
                     /locus_tag="VHX39_06620"
     CDS             4183..6834
                     /gene="tssH"
                     /locus_tag="VHX39_06620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033104 - type VI protein secretion
                     system complex [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system ATPase TssH"
                     /protein_id="HEX3990828.1"
                     /translation="MATIDLKQLIARLNDTCRRALEAAAGLTLSRTHYNVEIEHWLVK
                     LADRADGDVAAILRHYEVDNARFLTDLNRSLEKMKTGNGRAPSLAPEITDLVKQAWLF
                     ASLEQASGKIRSGHLLWALLADETLARSARDASGQLLKIQPDLLKRDFAAITANSAEA
                     AESGTLVTQTAEDGSPGVSEGGVPRPGGSGALDQFTIDLTAQAKAGKIDPILGRDSEI
                     RQVIDILTRRRQNNPIMTGEAGVGKTAVVEGFAIRLASGDVPPALKGVTLRTLDLGLL
                     QAGAGMKGEFENRLRGVIDEVKASPKPIILFIDEAHTMIGAGGAAGQNDAANLLKPAL
                     ARGELRTIAATTWAEYKKYFEKDAALTRRFQVVKVEEPSEPIAIAMIRGLVSTLEKHH
                     KVRILDEAVSEAVRLSARYIPSRQLPDKAVSLIDTACARVSMSQAAVPPAIEDRERRI
                     SLIDTEVAILDREMASGEDHAERREALLAERTVKASELVALHERWEQEKALATEITDI
                     RTKIESPEDTADKAVLREKLTATSKQLRELQGEEPLIYPVVDGVAVSEVVAGWTGIPM
                     GRMQSNEIRTVLNLRETMEHRIVGQSHALEAVAQAIQTSRAGLTDPRKPIGVFLMVGT
                     SGTGKTETALTLADLLYGGEQNMTVINMTEFKEEHKVSLLMGSPPGYVGYGEGGVLTE
                     AVRRRPYSVILLDEMEKAHPGVQDIFFQVFDKGNMKDGEGRDIDFKNTVIIMTSNAAT
                     DLIVRLCADPDTMPDAAGLAEALMPELMKTFKPAFLGRVTLVPYFPLSPDIIKKIVEL
                     QLNRVRRRVQESYGAKFLWDGSLIDTIAARCTETSSGARNVEKILSRTLLPELSAEVL
                     SRLAEGDAIDQISVGVDPTGSFQYAIN"
     gene            6870..7346
                     /locus_tag="VHX39_06625"
     CDS             6870..7346
                     /locus_tag="VHX39_06625"
                     /inference="COORDINATES: protein motif:HMM:NF017454.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
                     /protein_id="HEX3990829.1"
                     /translation="MAIFMKFGDKKGDVDTTQYKQWIMCHSFQFGSGRGISSATASGG
                     NRQGSHASVSEVTISKILDPASLHLWRDSLDGKLNTTVDISFTVADQDNSEYLHVTLW
                     DTGVSGWSVSSGGDRPSESISLNFSKIQLKDTSKKADGTAGDNLAIVYDLGKQTAG"
     gene            7515..9476
                     /locus_tag="VHX39_06630"
     CDS             7515..9476
                     /locus_tag="VHX39_06630"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3990830.1"
                     /translation="MESKFRQALGLHQQGRLADAEQGYQEVLRDQPHHFDASYLLGVI
                     ALQTRRLDLASDLFSTAIALRPDFTEAYNNRGAALADLGHLEGALSDYDHAIVLQPDH
                     FGAHNNRGAALARLGRFAEALSSYDRAIALRPDAADPYVNQGAALAKLGRTGEAMSRF
                     DTAIALQPDHPWAFYNRGNALRDLQRHAEAVESYDRAIALQPNHAEAYNNRGAALADL
                     GAPEAALSNYAGAIALRPNFVEAHNNNGTALALMDRLDEAVASYDRAIALNPNHAAAY
                     KNRGVALAGSGRFDAAVADFDRAIGLQPDYAEAHSDRAAALANLGRRREALASCDRAI
                     ALKPDSPEARFNRAACHLALGDYERGWEEYEWRWQTRHAAALPDLPGPLWQGNANQTI
                     LVHAEQGFGDSLQFCRYVPMLAKRATVVLDVPRPLVRLLSSLDCDVRIVARGDDLPPF
                     DAWIPMLSLPRAFNTTLATVPAAVPYLRADPEQASRWRDRVAALPGRKVGLVWAGSPL
                     SPQPRALAMDRRRSMTLQQFAPLAALPGLCLISLQKGDAATQKPPAGMVLHDWTEELH
                     DFADTAALVAAMDLVISVDTSVVHLAGALARPVWVLNRYDQCWRWLSDRTDSPWYPTA
                     RLFRQPEPGDWSSVIGEVAKALRNDQTLP"
     gene            complement(9461..10246)
                     /locus_tag="VHX39_06635"
     CDS             complement(9461..10246)
                     /locus_tag="VHX39_06635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HEX3990831.1"
                     /translation="MIADRICSWHATHAGTKRKHNEDTWVDRPDLGIWAVADGAGGHQ
                     AGEYASGLIAEALDSMPSELSAAELLGEVRVRIAATHQALREEAERRGGNTMIASTLV
                     ALLARGDHFACLWAGDSRAYMLRDGEMRQITRDHSLVQELVDAGSITAEQAEHHPHAN
                     IITRAVGADIEELVLDKVSGRLQPGDRFLLCSDGVCKTVPFEQLAELLRSDTGVPAPQ
                     SLIAAALALEVSDNVTAVAIEVPMATAETARSMDETMATQGSV"
     gene            complement(10243..10824)
                     /gene="tagF"
                     /locus_tag="VHX39_06640"
     CDS             complement(10243..10824)
                     /gene="tagF"
                     /locus_tag="VHX39_06640"
                     /inference="COORDINATES: protein motif:HMM:NF021393.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system-associated protein
                     TagF"
                     /protein_id="HEX3990832.1"
                     /translation="MSGHLAPEPLRGFSGKVPARGDFVHAGLPRDFTDPWHDWQSLVI
                     AGSRELMGDGWLDAFLEAPVWRFILPPGLCGARAAVGLIMPSVDKVGRYFPLTLAALP
                     EIGTPVADDWAEWLDSAEALGRLALDEDAPPERLMPPPSPVSASVSSETTSLWWTDGG
                     PLVTASQLALPLLPDVACYAAMLGYLAPTGSAP"
     gene            complement(10809..>11314)
                     /locus_tag="VHX39_06645"
     CDS             complement(10809..>11314)
                     /locus_tag="VHX39_06645"
                     /inference="COORDINATES: protein motif:HMM:NF018454.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type VI secretion IcmF C-terminal
                     domain-containing protein"
                     /protein_id="HEX3990833.1"
                     /translation="WKLQSAGDVEPPISPGDLAQFQRAAAIRDLFFGPGGKDPAVRFD
                     ITPLSADNVTKQVTIDLGDQQIVYAHGPTRPITVNWPGTNRIISARLAFDPPPSSGPP
                     VIQTDGPWALFRLFDHGTLRQTGSADRYNLDFVLGNRSASFEIRAGSVLNPLAPGLLR
                     AFSCPGI"
BASE COUNT         2177 a         3468 c         3481 g         2188 t
ORIGIN      
        1 ccagcagcac cggagatgcg ccgacgaggg tcgggcaaaa tgccgcagca gcgacgccgg
       61 ccaaagcagc gagtgcactt acgtcatcgg tgcgcgagtt cgggccggcc cgatgcctga
      121 tatcatggtc gacgatcatc aggccgtacg gctcgccgcc gggcatgccg aactcttctt
      181 cgtaaatttt ccgaaacaga ttgctctgat cgaattcgac cgcgcgttcc aggtcgcggc
      241 agatttcccc ccacccgata ttgaggattt tggttttcag gcgagagccg ctttcaatcc
      301 cgccgaccag ccaggcgaga ccgcgccagg ttccctccag ccggcgcacc cggtcatggt
      361 gcaggatggc gtcgagctgc tccgacagca tggcatcgat ggcgacgatg tcgcggtcca
      421 gcaggccacg cacgtcatcg gcggagccgg tccagccttg cggcaaccag tgcgccagcg
      481 ctgcatcgtt ctccgcggca aggaagccgg tcagcgcatc ttcgagcgca taatcccgta
      541 agcccagaaa ccggccggac agtatcgcgc cacggaggtc tgggcttgcc ggctcaggcg
      601 tcgcaactcc gccatccgga ggtgccgtag cggcgataat ctcctcgatg gcggagctgg
      661 aatcgttcac ggcgcgttgt cctacggcgc ctggcggcga cgcgtcagcc tgaagcggcc
      721 gggatacgcg ccaccatgcg caggctggtg gtcagttctt ccatctgcag ccacggccgc
      781 agatacgcca ccgcgttgta agacccaggc ttaccgggga tttcctgcac ccgcacctgt
      841 gcctcacgca acggatagcg ggccttggtt tcctggccgg cctgttcgtt gctgttgacg
      901 taattgagga tccaccggtt cagccaacgt tcgacatcgg aggcttccat gaagctgccg
      961 atcttgtcgc gggccatcac cttcaggtag tgcgcgaacc ggctggacgc catgatatac
     1021 ggcagccgag cagagatcgc ggcattggca gtcgcttccg gccggtcgta cttcttcggc
     1081 ttctgtgccg tctgcgcacc gaagaacacc gaatagtccg tgttcttgta gtggcacagc
     1141 ggcaggaagc cgaggttgga cagctcgaac tcacgccggt cggtgatggc gatttcggtc
     1201 gggcacttgg cgtccatgtc gccgtcgtcg gaggtaaaca cgtgggtcgg caaattctcc
     1261 accttgccgc cgccttcggc gccgcggatg gcggtgcaga agccgtactg cgcgaaggcg
     1321 tcagtcagcc gtgtgcccat cgcgtacgcc gcgttcatcc agcaatactc gccgtgatcc
     1381 atcggcttgg cggcaccggc cgcgtcaaac ggcgcttctt cgtagttgaa ctcatcgatt
     1441 tgcttggttg ccgcgccata cggcaggcgc gccagcgtgc gcggcatcac cagcgagacg
     1501 aagcgagcgt cttcgctgtc gcggaagctg cgccatttca tgtagtcgct ggtctcgaag
     1561 atcttcgcca gatcgcgcgg cttggccagt tcggtatagc tgtcaaagcc gaacatgccg
     1621 ggacccgctg ccgaaatgaa cggtgcgaag gcaccggccg caacattgga gatcaaccgc
     1681 aacgtctcga tatcgtcagg atgctgcgtc cattcatagt cgccaatcag cgcggcatag
     1741 ggttcgccgc ccggcgtgcc gaattcattt tcgtagatct tcttgaacaa ctggctctgg
     1801 tcgaattcca ccgcgcgctg caggtcgcgc gacagatcgc gcttcgacgc attcagcagg
     1861 cggatcttca acgtcgtgct ggtctcgctg ttcatgatga ggtagtgcag tccgcgccag
     1921 ctgccttcca gcttgagaaa tttcggatcg tgcatgatcg cgttgagctg ctcggacagc
     1981 ttttggtcga tcgccgcgat cgcacgctcg aacgtccggc tgatgttctt gtcgaacgtc
     2041 accgtccccg acatggcctg ttcgaccaaa ttcttcatca gatcctgggt cgcatcgggc
     2101 gccgtctgct tggtcgccgc caccacctgg tcgaggatcg atacgccttc cgcggcttct
     2161 gcgccggcgg tctgggttgc cgtttgtgcg cccgacataa tcagccctcc ttcggttcaa
     2221 tgccgagctg gccgctcagc gtttttagtt cattttcgtt ctgaaggacc ttttccagca
     2281 ggccttcgag ttcttccgaa cgatcgacct tgctcatgag gtcgcgcagc ttcgcgcggg
     2341 tttccatcag cgcccgcaac gccggaacct gttgcgcgac gcgtgccggc tcgaagtcct
     2401 cgatcgcgtt gaacttgagg tcgaccgcca tctggccgcc cgcttcggac agcttgttgt
     2461 cgacccgcaa cttcaggccg gggttcatcc gggccattac gtcgttgaaa ttgtcgcgat
     2521 cgatttgcac gaacttgcga tcggtcatgg attgcagcgg agcagtggga tcgccggaga
     2581 aatcccccat gacgcccatg acgaacggca attcccgtac gatcgcagcg ccttccgtct
     2641 ctacgtcata ggtgatgtga acccgcggct tgcggactcg atcgagcttc gaatggatgc
     2701 tcgcgctcat gggtctcttt ccctctgcca gaattaggat gtttcagaac agtttctctc
     2761 cccgccgacc attctgaaag ggcttcggcc gcgatactag cgagccgggt caatccaggt
     2821 caaccagagt atgttaaact accgcagcca cctttcgctg tgatttcgct cacaactttc
     2881 cgtgatgacc ggtagaaacg cgtccccgtg accggctatt ccgatgccgg acgaattcca
     2941 agcgaggtca ggatcgcctg ccgtacgctg atgtcgggta ccacctcctc caacagctcc
     3001 ggccaggtca gcttcgcgcg ccggatcgca tcgtcgagcg tataggccaa tggcgaggca
     3061 ggctcggtgc ggcggaaaaa agtggcaatg gtttccagcg tcttaagcgc atcgtcgcgc
     3121 gaaacggtgc gtgcgccggc agagaagccg gcgggaccgg gggcaccagg cgtggcagtg
     3181 gcatcgctcg ctgctgccgt tggttcgctg gtggcctcct ccggctgttc cgtggctgcg
     3241 ggagcgtaac ggatcgccac cgtgtgaatg tgccgcagca tgtctcgcac gtgggacgtg
     3301 gagggcgggt cctcgctggc cttttcgtcc agcacgctgg ccatgccctc ccatgcttcg
     3361 agtgccgccg ccgactgatc gcgcagccgc gccatggcgg ctcctgctgc gcgggcctcg
     3421 ttttccatgt catcccacgg aacggcgccg gcagcgatgc gggcatcgcg acgctccgcc
     3481 ggcagtgcgg gcaattgttc cgaagattga taagtgaaaa atgtgaccgg cgtaccgtcc
     3541 cgccgatcga agaaatgcag cttgtaaagt ggctgaatca gtgagccgcc gccatcgcgg
     3601 ccattcaggc cggtgagcgg cgccacccgg gtttccactc cgtaatcatc cggcagcgga
     3661 aatatcccgt cccagtactg ctccgccagg cctttgatta atgatgcgcc cgcatacagc
     3721 ccgacaaggc cgtgactgcg cacataggct tcggtcaccc aggccgctac ctcaaggtcc
     3781 ttggcggcct cttgaagagt cttgagtccg acatcccgca cgatgcgcca actcggcgtg
     3841 ggatcgccgg cattgggatc gccattgtcg atcatttttt cggcgtcccg tgcgtccgac
     3901 ctggcatcac gcaatctgtt gtaaggagat tgtgaggaga aatcttccct gatatctacc
     3961 ccctgcggag catcgccggg gattggctcg aggagtgcag ccagatcgaa cccatcggga
     4021 aaatctacca tgcgcatgcc tttctttctg gacaatgcct caaaataaca tctaaagtat
     4081 cggaacggaa gggttcgttg ggttcgccgg acaactggta tcagcaatga tatcggcaac
     4141 atgcttgcga gtcattgcgt acgctccggc gagagggaaa aaatggctac catcgatctg
     4201 aaacaactca ttgcgcggtt gaacgatacc tgccgccgtg cgttggaagc tgccgcaggt
     4261 ctgaccctgt cccgcaccca ttacaacgtt gagatcgagc actggctggt caagctcgcc
     4321 gaccgggcag atggcgacgt ggccgccatc ctgcgccatt acgaggtcga caatgcgcgc
     4381 tttctgaccg acctcaaccg ctcgttggag aagatgaaga ccggtaatgg gcgcgcgcct
     4441 tcgctggcac cggaaatcac cgatctggtc aaacaggcgt ggctgttcgc ttcgcttgag
     4501 caagccagcg gcaagatccg ctcggggcat ttgttgtggg ctctgctcgc cgacgagacg
     4561 ctggcacgca gtgcgcgcga tgcgtccggc cagttgctga aaatccaacc cgacctgttg
     4621 aaacgcgact tcgctgcgat caccgccaac agtgccgagg cagcggaatc gggcacgctc
     4681 gtcacacaga ccgcggaaga tggcagccca ggtgtgtcag aagggggtgt gccgcggcca
     4741 ggcggaagtg gcgcgctgga tcaattcacc atcgacctga ccgcccaggc gaaggccggc
     4801 aagatcgatc cgatcctggg acgggattcg gaaatccgcc aggtcatcga tatcctgacc
     4861 cggcgtcggc aaaacaatcc aatcatgacc ggggaggctg gggtcggaaa gaccgcggtg
     4921 gttgaaggct tcgcgataag gctggcctcg ggcgatgtgc ccccggcact gaaaggcgtc
     4981 accttgcgca cgctcgatct cgggctcttg caggccggcg ccggcatgaa aggcgagttc
     5041 gaaaatcgtc tgcgcggcgt aatcgatgag gtgaaggcca gtcccaaacc catcattctg
     5101 ttcatcgacg aagcacacac gatgattggc gccggcggtg ccgccggcca gaatgatgcc
     5161 gccaatttgc tgaagcccgc tctcgctcgt ggcgaactcc gcaccatcgc cgccaccacc
     5221 tgggccgaat acaagaagta cttcgagaag gatgccgcgc tgacccgccg cttccaggtg
     5281 gtgaaggtcg aggagccgag tgaaccgatc gcgatcgcaa tgatccgcgg tttggtgtcg
     5341 acgttggaaa agcaccacaa ggtgcgcatt ctcgacgaag cggtcagcga ggcggtgcgg
     5401 ctttccgcgc gctatattcc gtcccggcaa ttacccgaca aagcggtcag cctgatcgat
     5461 accgcctgtg cgagggtatc gatgagtcag gcggcagtgc ctccggcgat cgaagaccgc
     5521 gaacggcgga tcagtctgat cgataccgag gtcgccattc tcgatcgcga aatggccagt
     5581 ggcgaagatc acgccgaacg ccgtgaggcg ttgctggcgg aacgcacggt caaagcgtcg
     5641 gaactggtgg cgttgcacga acggtgggaa caggaaaaag ccctggccac cgaaatcacc
     5701 gatatccgca ccaagatcga aagccccgag gataccgccg acaaggccgt gctgcgcgag
     5761 aaactgacgg ccacgtcaaa acagttgcgc gagctgcagg gcgaagagcc gctgatctat
     5821 ccggtcgtcg atggcgtcgc ggtcagtgag gtcgttgccg gttggaccgg cattccgatg
     5881 ggccggatgc aatcgaatga aattcgcacc gtgctcaatt tgcgcgaaac catggagcac
     5941 cggattgtcg gtcaatcgca cgctcttgag gcagtggccc aggcgataca gacgagccgg
     6001 gcggggctga cggatccacg caagccgatc ggcgtgtttc tgatggtcgg cacgtcgggc
     6061 accggcaaga cggaaaccgc gctgactctg gccgacctgc tgtatggcgg cgagcagaat
     6121 atgaccgtta tcaatatgac ggagttcaag gaagaacata aagtcagtct gctgatgggc
     6181 tcgccacccg gctatgtcgg ttacggcgag ggcggcgtgc tgaccgaggc agtccgtcgc
     6241 cggccgtatt ccgttatcct gctggatgaa atggaaaagg cgcatcccgg cgtgcaggac
     6301 attttcttcc aggtgttcga caagggaaat atgaaagacg gtgaaggtcg cgacatcgac
     6361 ttcaaaaata ccgtcatcat tatgacatcg aatgccgcca ccgatctgat cgtccggctg
     6421 tgcgccgatc ctgatacgat gccggatgca gccggtctcg ccgaggcgct gatgccggaa
     6481 ctgatgaaga ccttcaagcc ggcgtttctg ggccgggtga ccttggtgcc gtatttcccg
     6541 ctgtcaccgg acatcatcaa gaaaatcgtc gaactacaac tcaatcgcgt gcgacgccgg
     6601 gtgcaggagt cgtacggagc aaaattcctg tgggacgggt cgctgatcga tacgatcgcc
     6661 gctcgctgca cggaaacctc gtctggcgcc cgtaacgtgg agaagatcct gtcgcgaacg
     6721 ctgctgccgg aattgtcagc cgaagttctg tcgcgcctcg ccgaaggtga cgcgatcgat
     6781 cagatctccg tgggagtgga cccgaccggt tcgttccagt acgcgatcaa ctgacaacgt
     6841 tatcaccgca ataagggagt agtagaacaa tggctatctt tatgaagttt ggcgacaaaa
     6901 agggtgacgt cgatacgacg cagtacaaac agtggatcat gtgccactcg ttccagttcg
     6961 ggtccggccg cggcatcagt tccgccaccg cgagcggcgg caaccgtcag gggtcgcacg
     7021 cgtcggtgtc cgaagtcacc atttcgaaaa tcctcgatcc tgcgagcctg cacctgtggc
     7081 gtgactcgct cgatggcaaa ctcaatacga cggtcgacat ttcgtttacc gtcgcggacc
     7141 aggacaactc ggagtatctg catgtgacgc tttgggacac cggcgtgtcc ggttggtccg
     7201 tttcgtccgg cggcgaccgt ccctcggaaa gcatctccct gaacttctcc aagatccaac
     7261 ttaaagacac ttccaagaaa gccgacggca cggccggcga caatcttgcg atcgtttatg
     7321 acctgggcaa gcagacggcc ggctaatccg ccgattgccg ctcgttccaa tggggccgga
     7381 ggaagttcct ctggcccttt tttgttggcg caagcggtgt tgccggggct tccgatccgg
     7441 ggctaacctg ccggcatcgc caatcttgca cataagggtt tccgccgcat atgcaggagc
     7501 cgaagagcgc ggcagtggaa agcaaattcc gtcaggcgct tgggctgcat cagcagggca
     7561 ggctggccga cgccgaacaa ggttatcaag aggttctgcg cgatcagccg caccatttcg
     7621 atgcgtccta cctgcttggc gtgatcgcac tgcagaccag acggcttgac ctcgccagtg
     7681 atttattcag cacggcgata gcgctgcgtc ccgacttcac tgaagcttac aataaccggg
     7741 gtgccgcgct ggcagatctg ggtcaccttg agggcgcgtt atccgactac gatcacgcca
     7801 tcgtgctaca gccggatcat ttcggagccc acaacaaccg cggcgcggca ttggctcgcc
     7861 tgggtcgttt cgccgaggca ttgtcgagct atgaccgcgc gattgcattg cgaccggacg
     7921 cggccgaccc gtatgtgaac caaggtgcgg cattggcgaa actgggacgc accggcgaag
     7981 caatgtcgcg tttcgacacg gcaatcgcgc tgcaacccga tcatccctgg gctttttaca
     8041 accgcggcaa tgcgttgcgg gatttacaac gccatgcaga ggcggtggaa agttacgacc
     8101 gcgccatcgc gctgcaaccc aatcacgctg aggcgtacaa caaccgcggc gccgcactcg
     8161 ccgatctggg cgcgcccgag gcggcattgt cgaattacgc tggcgcaatc gcactgcgac
     8221 ccaatttcgt tgaagcgcac aacaacaatg gcaccgcgct cgcgctaatg gatcggcttg
     8281 acgaggcggt ggcgagttac gatcgggcaa tcgcactgaa cccgaaccat gcggcggcct
     8341 acaaaaaccg aggtgtcgcg ttggcggggt caggtcgttt cgatgctgcg gtggccgact
     8401 tcgatagggc gatcgggctg caaccggact atgccgaggc acactccgac cgggccgctg
     8461 cgttggcaaa tctgggacgt cgcagggaag cactggcgag ttgcgatcgg gcaatcgcac
     8521 tgaaaccgga ttctcccgag gcgcgcttca accgggctgc ctgccatctg gcgctcggtg
     8581 attatgaacg tgggtgggag gagtacgaat ggcgttggca aaccaggcac gctgccgcgt
     8641 tgcctgatct ccccggacct ttatggcaag gcaacgctaa ccagacgatc ctggtccacg
     8701 ccgaacaggg atttggcgat tcgttgcagt tttgccgcta tgtgccgatg ctggccaaac
     8761 gcgcaaccgt tgtgctggat gtgcctcgtc cgctggtgcg gttgctgtcg agcctggatt
     8821 gcgacgttcg gatcgtcgcg cgtggcgacg acctgccgcc gttcgatgcc tggatcccca
     8881 tgctgagtct gccgcgcgca ttcaacacga cacttgcgac cgttccggct gcggtgccgt
     8941 atttgcgtgc tgatccggaa caggcgtccc gctggcgcga tcgcgttgct gccttgccgg
     9001 gccgcaaggt cgggctcgtt tgggctggtt cgccgctgag tccgcagccg cgggctttgg
     9061 caatggatcg gcggcgttcg atgacattgc aacagtttgc gccactcgcg gcacttcctg
     9121 ggctctgcct gatttcgttg caaaagggtg acgccgcaac tcagaagccg cccgctggca
     9181 tggtgctgca cgactggacc gaagaactgc atgactttgc cgatacggcg gctcttgttg
     9241 cggccatgga cctggtgatc agcgtcgaca cttcggttgt gcatctggca ggcgcgcttg
     9301 ccaggccggt gtgggtgctc aatcgatacg atcaatgttg gcgctggtta tccgaccgca
     9361 ccgacagccc ctggtatccg acggcgcggt tgttccgtca gcctgaacca ggcgattggt
     9421 ccagcgtgat cggcgaggta gccaaggcgt tacgcaacga tcagacgctg ccctgagttg
     9481 ccatggtttc gtccatcgac cttgcagtct cggccgtcgc catcgggacc tcgatcgcca
     9541 cggcggtcac attgtcggac acctcgagcg ccagcgccgc ggcgatcaag gattgcgggg
     9601 cagggacgcc ggtatcacta cgcaataatt cggccagttg ctcgaacggc acggttttgc
     9661 acactccgtc actgcacagc agaaaccggt cgcccggttg cagccgtccg gagaccttgt
     9721 ccagcacgag ttcctcgatg tcggccccga ctgcgcgggt aatgatgttc gcatgcggat
     9781 ggtgctcggc ctgttccgcg gtaatcgagc ccgcgtccac gagttcctgc accaggctgt
     9841 gatctctggt gatctgacgc atttccccgt cgcgcaacat ataggcgcgc gaatctccgg
     9901 cccacagaca ggcgaaatga tcgccacgcg ccagcagcgc gaccaacgtc gatgcgatca
     9961 tcgtgttgcc gcctcggcgt tcggcttcct cgcgcagcgc ctggtgggtc gcagcgatcc
    10021 gcacccgcac ctcgcccagg agttctgcgg cggatagttc cgatggcatc gaatccaacg
    10081 cctcagcgat cagtccggag gcgtattctc cggcctgatg gcctcccgcg ccgtcagcca
    10141 cagcccagat gcccaggtcg gggcggtcca cccaggtgtc ttcgttatgt ttccgtttgg
    10201 taccggcgtg ggtcgcgtgc caggagcaaa tccggtcagc gatcatggcg cactccccgt
    10261 tggcgcgaga tagcctagca tggccgcata gcatgcaaca tcgggcagca aaggcaacgc
    10321 cagttgggac gctgtaacaa gcggcccgcc atcggtccac catagacttg tcgtttcgct
    10381 gctgacggaa gccgacaccg gcgatggcgg cggcatcaat cgttccgggg gagcatcctc
    10441 atccaatgcc agtcgcccca gcgcttcggc gctatcgagc cattccgccc aatcatccgc
    10501 caccggcgtt ccgatttccg gcaatgccgc caacgtcaac gggaaatacc gtccgacctt
    10561 gtccacactt ggcatgatca gaccgaccgc agcgcgtgcg ccgcacaggc cgggcggcag
    10621 aatgaaacgc cagaccggcg cttcaagaaa tgcatcgagc caaccatcgc ccatcaattc
    10681 gcggctgccg gcgatgacca gagactgcca gtcgtgccac gggtcggtga agtcgcgcgg
    10741 cagtccggcg tgcacgaaat caccgcgcgc cggcactttg ccggagaagc cacgcaatgg
    10801 ttcgggggct aaatgcccgg acaagaaaag gctcgcagca gaccaggcgc cagcggattg
    10861 agcaccgatc cggcgcggat ttcgaatgat gccgagcgat tgcccagaac gaagtcgaga
    10921 ttataacgat cggcactgcc ggtctgccgc aacgtgccat gatcgaacag ccggaacaaa
    10981 gcccagggac cgtcggtctg aatgacggga gggcccgagg aaggcggcgg gtcgaaagcg
    11041 aggcgggcac tgatgattcg attggtgcca ggccaattga ccgtgatcgg ccgggtcggt
    11101 ccgtgggcgt aaacgatctg ttgatcgccc agatcgatcg tgacctgttt cgtgacgtta
    11161 tcggccgaca acggtgtgat atcgaaccgg accgccgggt ctttgcctcc cggtccaaag
    11221 aacaaatcac ggatcgctgc ggcgcgttga aactgcgcca gatcgcccgg cgaaatcggc
    11281 ggctcgacgt caccggcaga ctgcaacttc cagt
//
LOCUS       DATAVD010000356         1893 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2266835, whole genome shotgun sequence.
ACCESSION   DATAVD010000356 DATAVD010000000
VERSION     DATAVD010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1893
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2266835"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(432..1754)
                     /locus_tag="VHX39_06650"
     CDS             complement(432..1754)
                     /locus_tag="VHX39_06650"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990834.1"
                     /translation="MTAFQFGIIAVLFCLNAMDGFDVLAISFAAPGIVREWAISSQAL
                     GVVISLGLFANAFGSLVVAPFADRIGRRPMIFLSLVAMTAGMLLSALATGLGMLSAGR
                     LITGVGVGALVPVISALAAEYSNTRYKDFGVIIMAIGFPVGGLVGGQGAALLLQHFDW
                     HSIFLGGAAASAVLLLAPLWLVPESVEYLVSRRPTGALESINAVLLRLGHPGIGTLPA
                     IPQVKGASSALDILVRPALLVVALTITLSYALHNSTLYYALNWIPKIVVDLSFTQSQA
                     AAVAAWCSGGGILGSVLAAWLATRMKIRTLTAGALFATAIFLCLFAYTPASLAYLTGA
                     SMLLGACVYGAQVSLYALMTRSFPVHVRATGVGFVTGVGRLGGIISPLVSGHLIGIGL
                     PYSEVSLVMSSGSALAALALLLSVLWLSPARVATPVPGKQSQRPSASP"
BASE COUNT          402 a          574 c          618 g          299 t
ORIGIN      
        1 cgtcaacttg cgggagctcg ctgatgcgcg cgcaggccgt cgcaccgata tcggctgcca
       61 cttgtgtggc gaggccgggc tcggaatcca ggactgtgac ctggtgtccc ccttttacga
      121 tgttcgcggc catgggcttg cccatattgc ctacgccgat aaacgcaact ttcatgaaat
      181 cttgtcctgt tgttgaatcg cggaagcgat gcgggcacgc caacatagcg ccccgtctgt
      241 cgtgatgtaa acaaccgcaa cgcgcgacgg gcgtgccgtg gttgcgtagt cacgattgtg
      301 tggaaatcaa catttgctat tcgcgaaaac tgtttacgcg aaatgcgcgc gcggacactg
      361 ctagcatgac tggcataata aaagtacgca cggagcgttc ggcggtagca gcgttagagc
      421 gcgcgtgcgg gctatggaga agcactgggg cgttgagatt gcttccccgg gaccggagtc
      481 gcgacgcggg cagggctgag ccacagaacc gacagcagca gcgccagcgc cgccagtgcc
      541 gagcccgagg acatgacgag cgacacctcc gagtaaggta gtccgatgcc gatcaggtga
      601 cccgaaacga ggggagagat gatgccgccc aaccggccga cacccgtcac gaaaccgacg
      661 cccgtggccc gaacgtggac cgggaatgag cgcgtcatca acgcgtagag actgacttgc
      721 gcgccgtaca cacatgcacc caacaacatg gaagcacccg tgaggtacgc gaggctggcg
      781 ggcgtgtagg cgaacaggca caggaagatt gcggtcgcga acaacgcacc tgcggtgagc
      841 gtgcggattt tcatccgtgt ggcgagccac gccgccaaca ccgaccccag aattccgccg
      901 ccgctgcacc aggccgccac cgcggccgct tgcgattggg tgaacgacag gtccacgaca
      961 atcttcggga tccagttcag ggcgtagtag agcgtcgagt tatggagggc gtaggacagt
     1021 gtgatggtga gcgccaccac caacagagcg ggtcggacca ggatgtccag agcggagctg
     1081 gcccctttga cttgcgggat tgccggcagg gtgccgatcc ctgggtggcc cagacgaagc
     1141 aggactgcgt tgatgctctc cagggcaccc gtcgggcggc gcgagaccag gtactctacc
     1201 gattccggta ccagccacag cggcgccaac agcaacacag cactcgcggc cgcaccgccc
     1261 aggaagatgg agtgccagtc gaagtgttgc aggagcagtg ccgctccttg tcctccgacg
     1321 agtcccccga ccgggaaccc gatcgccatg atgattacgc caaagtcctt gtagcgggta
     1381 ttgctgtatt cagcggcgag cgcgctgatc acgggcacca gggctccgac gccgactccg
     1441 gtgatgaggc gtcccgcgga caacataccc aggcccgtcg ccagcgcact caacaacata
     1501 cccgccgtca tggcgacgag gctcagaaag atcatgggcc ggcggccgat gcgatccgcg
     1561 aacggcgcca ccaccagcga gccgaaggcg ttcgcgaaca gtccgagcga gatcaccacg
     1621 cccaaggcct gcgaggagat cgcccattcg cgcacgatgc cgggtgcggc gaaggagatc
     1681 gcgagcacgt cgaagccgtc catcgcattc agacaaaaca gcacggcgat gatgccgaac
     1741 tggaaagccg tcatcggccg ggtcgcgatg accgcgcgtg gatcgttgcc ggcgtagtcg
     1801 gagtcgatag gcgttgtgat tgtcatggga aatatgcggt cagggcagcg cgtaggcctg
     1861 cacgtaaagg ccctggttgg gcccgaattt tga
//
LOCUS       DATAVD010000357         6289 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_405670, whole genome shotgun sequence.
ACCESSION   DATAVD010000357 DATAVD010000000
VERSION     DATAVD010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6289
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405670"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(192..1109)
                     /locus_tag="VHX39_06655"
     CDS             complement(192..1109)
                     /locus_tag="VHX39_06655"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX3990835.1"
                     /translation="MSCRLARCTCGITGAVLAILLPAAGFAQQPVAPDVASTSALPVP
                     AGTDPVIGSVDGKLIYLSDLTRATNALPEQMRKLPFDSIMPVLLDRLIDHAAATMTAR
                     RADLDKQPEIRREMQAAADQVLERAWLAQVTSEKVTDAAIQARFDQEYAHRPATDEVR
                     ARHILVGSEAEAKSVLAELKGGADFATVARVVSKDPDARQGGDLGFFRRDQVWPGFAD
                     VAFSLQPGQISPVPIHNEFGWHILKVEERRLVAPPVLSEMRDKIRQELTTETVREAIA
                     DARSRLIIHKFNLDGSEIDTDPQSIHTGP"
     gene            1231..2988
                     /locus_tag="VHX39_06660"
     CDS             1231..2988
                     /locus_tag="VHX39_06660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3990836.1"
                     /translation="MKAPIDSSTTRALLGRLWRDQLRHYKPALALVLLLSAAMAAATA
                     MYPVVLRYAGILFADKDPRIAWQIPLLVILVTLIKAITQYFQSVEAQALVLKVIRDLQ
                     NRMFVHLTRTDLARIEREAPAQLATRFTTDAATIREALTRAVNGIADVVTVIGLVASM
                     IYMDWLLSLLSAVLYPLAAVPIQRIGRRVRRASGGMQETIGETAALLNESFAQARTVR
                     AYRLEETETKRAEIAFRSLYRTLLNITKSRSRVEPVLEVLGGIAVALVIAFEAWRATV
                     SDHTLGDFGAFVGALLLAARPLRALGSLNSALQEGLAGLVRVFAVIDEPARIQDVPNA
                     QPLRAGHGHVRFEQVGFVYPDGRVGLNGLTFEALPGQTVALVGPSGAGKSTALALIPR
                     LHDATAGVVRIDGADVRGVTLASLRDSIAYVGQDALLFDDTVAANIAMGRPGASREAI
                     EAAAEAAQAASFIATLPRGYDTVVGPGGGRLSGGQRQRIALARALLRDPRVLLLDEAT
                     SALDTENEAAVQMALARLRAGRTTIVIAHRLSTVRDADVVVAMTDGRAAETGTHASLL
                     AEDGLYARLVRSQALAVVA"
     gene            3320..3805
                     /locus_tag="VHX39_06665"
     CDS             3320..3805
                     /locus_tag="VHX39_06665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990837.1"
                     /translation="MPGLATGAIVSAGLLVRDWATPGRHPKILEIGTTVLFVALTLYA
                     ILGGGIQSVIGVRLCVDAGLLLIVVLSMAVGRPFTMEYAREQVASEFWESPQFRRTNY
                     VITAIWAVAFSVMVIAELALLFVPVLPPRVGIIAIILALVGAVKFTGWYPEQVKSRPA
                     S"
     gene            4007..5209
                     /locus_tag="VHX39_06670"
     CDS             4007..5209
                     /locus_tag="VHX39_06670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3990838.1"
                     /translation="MAKLQTTRRRVLGGAVGLSALGAGLNPGSARAAAAPALPSAPVA
                     LNVVDVAGQLQLTQRAMDSFAHANPKLVSKITYSQAPAPELPGKIKAQQAAGAVDIDL
                     VLTGTDGLSAGIDQRLWVPIVTDYASELPNLKQIYQPGALKMQGLAENQAVCVVFCPA
                     GPIIEYMPDAVKQPPKTAQELLDWAKAHPKRFMYARPANSGPGRTFLQGLPYILGDKD
                     PMDPDKGWDKTWAYLVELGKTIEYYPTGTGAVMKELAEGSRDMIASHIGWDLNPRILG
                     VVPKEAEVGTLQGFHWVTDAQYWAIPKGVSNDKLAVLLEMTKYMLSKPAQAMTYDKGY
                     FYPGPAVKDVPLSMAPEDSQKLINEFNRPIYAKLIADVPSEVPLPADKLVFAFQRWDQ
                     QVGARVGK"
     gene            5216..6268
                     /locus_tag="VHX39_06675"
     CDS             5216..6268
                     /locus_tag="VHX39_06675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012978363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3990839.1"
                     /translation="MAVVSRDFQELRLEQISRDFGQVHALRDVTLTVKRGEFVALLGP
                     SGCGKSTALNCIAGLLQVTGGAIYLDDRRLDELGPEDRGFGMVFQNYALFPHMSVRRN
                     VGFGLVTQRRPRAEIARRVDEALALVRLEAQRDRLPGQLSGGQQQRVAIARAIVVGPP
                     LVLMDEPLSNLDAKLRLEMRAEIRRIHAMLGCSTIYVTHDQEEALSLADRIVVMIEGQ
                     ARQIGTPEELYARPENAEVAEFMGYRNLFSAATEAVDGGIAVRIGGARLMGTPVGPIC
                     ARATVAIRPDDMRLTAGGPIAATVEIAEYHGRDFYAVARLADGAEVYFRCDQRVAVGE
                     PVRLDAAPSRVLVYAA"
BASE COUNT         1125 a         1958 c         2041 g         1165 t
ORIGIN      
        1 accagcgcat cgatccctgg cgcgccgctg ccgccaagaa tgcagccgaa cgtgtcgagg
       61 atgtcgcgct tcgttgccgc cacggtcgca gccggcaaat ttgcaaacga ggtgcgggtg
      121 acgtgagcgg ccaactcgaa cgcgggatcc tgaaccatct gaagtctcca acggtgaaaa
      181 ctacgcgctt ttcaaggtcc ggtatggatg gattgcggat cggtatcgat ctcggaacca
      241 tccagattga acttgtgtat gatcaaccgg ctcctggcgt cggcgatggc ttcgcgcact
      301 gtctcggtgg tcagttcctg gcgaattttg tcgcgcatct cagacaatac cggtggagca
      361 accaagcgcc gttcctcgac ctttagaata tgccagccga attcgttgtg gatcggcacc
      421 gggctgattt gccccggctg aagggagaac gcgacatcgg caaagccggg ccagacctgg
      481 tcacgccgga aaaaccccag atcgccgcct tgcctggcgt caggatcctt gctgacgacc
      541 cgggcaacgg tggcaaagtc ggcgccgccc ttcaactcgg ccaggaccga tttggcctcg
      601 gcctcgctgc caaccaggat atgtcgggct cgcacttcgt ccgtcgcggg tcgatgcgca
      661 tattcctggt cgaagcgagc ctgaattgcc gcatcggtca ctttctccga cgtaacctgg
      721 gccagccacg cacgttcgag cacctgatcc gcggcggctt gcatctcacg ccggatctcc
      781 ggttgcttat cgagatcggc tcgccgtgca gtcatggtcg ccgctgcatg gtcgatgagc
      841 cgatcgagca aaaccggcat gatcgaatcg aacggcaatt tccgcatttg ctccggcagt
      901 gcgttggtgg cccgggtcag gtcactgaga taaatcagct taccgtcgac actaccgata
      961 accggatcgg ttccggcggg aaccgggaga gccgaggtgc tcgcgacgtc aggtgcgacc
     1021 ggctgttggg caaacccagc ggcaggcagc aggatcgcca gcaccgcgcc ggtgatgccg
     1081 caggtgcaac gggcgagacg gcacgacatg ctgacctccg gagggccata tgcctgtttg
     1141 tgcgttagaa cgccagggac gcgggcggcc cgaccgcgtt cgtcatggcg catttgagtt
     1201 acctcggcca ctccggcaaa cactgccgcc atgaaagccc cgatcgactc gtccaccacc
     1261 cgtgcccttc tgggccggct ctggcgcgac cagcttcgcc actacaagcc ggcgctggcg
     1321 ctggtgttgc tgttgagtgc cgcgatggcc gcggcgaccg caatgtatcc agtggtgctg
     1381 cgctacgccg ggatcctgtt cgctgacaaa gatccccgga ttgcctggca aatccccctg
     1441 ctggtaatcc tggtcacatt gatcaaggcg atcacgcaat acttccaaag cgtcgaagcc
     1501 caggcgctgg tgctgaaagt catccgcgac ctgcagaatc gcatgttcgt gcatctcacg
     1561 cggaccgacc tcgcccgcat cgagcgcgag gcgccggcgc aacttgccac ccgcttcacc
     1621 acagatgccg ccaccatccg cgaggcattg acccgcgccg tcaacggcat cgccgatgtg
     1681 gtgacggtca tcgggctggt tgcgtcgatg atttacatgg actggctgct gtcgttgctc
     1741 tcggccgtgc tgtacccgct ggccgccgtg ccgatccagc gcatcggccg gcgggtgcgg
     1801 cgcgcctcgg gcggcatgca ggaaacaatc ggcgagaccg cggcgctgct gaacgagagt
     1861 ttcgcccagg cgaggacggt gcgcgcctac cggctggagg aaaccgaaac gaaacgggcg
     1921 gagatcgcgt ttcgctcgct gtaccgcacg ctgctgaaca tcaccaaaag ccgttcccgg
     1981 gtcgaaccgg tgttggaagt cctgggtggc attgcggtcg ccctggtcat tgcgttcgag
     2041 gcctggaggg ccaccgtctc cgatcacact ctgggcgatt tcggtgcctt cgtcggggcg
     2101 ttgctgctgg cggcgcgacc gttgcgtgcg cttggctcat tgaattcggc gttgcaggag
     2161 gggctggcag gtctcgtgcg ggtgtttgcc gtgatcgacg aaccggctcg gatccaggat
     2221 gtcccgaacg cgcagccgtt gcgcgcagga cacgggcatg tgcggttcga gcaggtggga
     2281 ttcgtctatc ccgacggccg cgttggcctc aatggtctaa cgttcgaggc attgccggga
     2341 cagaccgtgg ccctggtcgg gccctcggga gcggggaagt cgacggcttt ggcactgatc
     2401 ccacggctgc atgacgcgac ggccggagtg gtgcggatcg acggcgccga cgtgcgcggc
     2461 gtcactttgg caagtctgcg agacagtatc gcctatgtcg gccaggacgc gttgttgttc
     2521 gacgatacgg tggcggcgaa tatcgcgatg ggccggccag gcgcgagccg ggaggcgatc
     2581 gaggctgcgg ccgaggcggc tcaggctgct tcattcattg cgaccctgcc gcggggttac
     2641 gatacggtgg tcgggccggg tggcggccgt ttgtccggcg ggcagcggca gcggatcgct
     2701 ctggcgcgtg ctttgctacg cgatccgcgg gtgctgctgc tggatgaggc gaccagtgct
     2761 ctggacaccg agaacgaagc cgcagttcag atggctttgg ctcggctgcg ggcaggtcgg
     2821 acgacgatcg tgatcgccca ccggctgtcg acggtgcgtg acgcggatgt tgtcgtggcg
     2881 atgacggacg gacgagcggc agagaccggg acccacgcgt cgctgctcgc ggaagatggg
     2941 ttgtacgcgc ggctggtgcg gtcacaggcg ttggcggtgg tggcgtaacc ggaccgattg
     3001 ttggtttggg accgttccgg cctggctacg gacgatcaaa tgggcgggag accgcggtta
     3061 tccgccgatg gtcagaacgc gatgttcgag acatctgcaa cggacgctgg tcaggccgcg
     3121 aaataccacg cagaaacacg gtggcgaaac gacgtactat ctgagcgaag cacatatcga
     3181 ggtttcgatc tggcggcgcg agggcaactc gtcacatctg gcgcaacaca cgacaacacc
     3241 gggaaagcaa ataatgggaa tcctcttggc cttcgcaccg ttcatcgctt tcgccgtcat
     3301 cgacagaatt tttggcgcaa tgccagggtt ggccaccggc gcgatcgtat ccgccggtct
     3361 gctcgtgcgg gattgggcga ctccggggcg ccatcccaaa atcctcgaga ttggcacgac
     3421 ggtcttgttt gtcgcgctca cgctctacgc aattttgggc ggcggcatcc agtctgttat
     3481 cggggtcagg ctttgcgtcg atgccggcct gctgctgatc gtggtcttgt cgatggcagt
     3541 cggccgaccg tttacgatgg agtatgcccg cgaacaggtt gcctccgaat tctgggagag
     3601 cccgcaattc cgtcgcacca actacgttat cacagcgata tgggccgttg ccttttcggt
     3661 catggtgatc gctgagctcg ccctgctttt tgtgcctgtg ctgccgcccc gggttggtat
     3721 catcgcgatc atcctcgccc tggtcggcgc ggttaaattc accggctggt atccggaaca
     3781 agtgaagagc cgaccggcat cctgaggttc gcggcaggcc agggtcgccg agcccgatgc
     3841 cggagcgcat ccccgaacct ggaaaacccc ggaaaatcag accgctggtc ctcgcaatcc
     3901 gggacgttcc ccaacttcac aaccaggtcc cttcgctata gacgaccccc aacggtgctg
     3961 ccgactgcaa cgtccatgag ccgagcaaca cccagggagg acacatatgg caaagcttca
     4021 aacaactcgc cgccgcgtgc ttggcggggc ggtcggcctc tccgcattgg gcgccggact
     4081 taacccgggc agcgcacgcg cggccgctgc tcccgcgtta ccatctgctc cggttgccct
     4141 gaatgttgtt gacgttgccg gccagctgca gctgacccaa cgtgcgatgg acagttttgc
     4201 ccacgccaac ccaaaactgg tgtcgaagat cacctattcg caggccccgg cgcccgagtt
     4261 gcccggcaag atcaaagccc agcaggccgc cggagcggtc gatatcgatc tggtgctgac
     4321 cggcactgac ggattgtctg ccgggatcga ccagaggctg tgggttccca ttgtgaccga
     4381 ctacgcctcg gagctgccca atctgaagca aatctaccag cccggagcgc tcaaaatgca
     4441 gggactggcg gagaaccagg cggtctgcgt cgtgttctgc cctgccggtc cgatcatcga
     4501 atacatgccc gacgccgtga agcagccgcc gaagaccgcg caggaactgc tcgactgggc
     4561 caaagcccat ccgaaacgtt tcatgtatgc aaggcctgcc aattccggcc caggacggac
     4621 gttcctgcaa ggcctgccct atattctggg cgacaaggac ccgatggacc ccgacaaagg
     4681 ctgggacaag acctgggcct acctcgtcga actgggcaag accatcgagt attacccgac
     4741 cggcaccggc gcagtgatga aagaactggc cgaagggtcc cgagatatga tcgcctcgca
     4801 tatcggctgg gatctgaacc cacgcattct gggcgtcgtg ccgaaggaag ccgaggtcgg
     4861 gactctgcaa ggcttccatt gggtcaccga cgcacagtac tgggccatcc cgaaaggcgt
     4921 ctcgaacgac aagctcgccg tgctgctgga aatgaccaaa tacatgctga gcaagccggc
     4981 ccaggcgatg acttacgaca aagggtattt ctacccggga ccggcggtga aggatgttcc
     5041 gctgtcgatg gcacccgaag acagtcaaaa actgatcaac gaattcaacc ggcccatcta
     5101 cgcgaaactc atcgccgatg tcccgtcgga ggtgccgttg cccgctgaca agctggtctt
     5161 tgccttccag cgctgggatc agcaggtcgg cgccagggtc ggcaagtaac ccagcgtggc
     5221 cgtcgtctca cgcgacttcc aggagttgcg gctggagcaa atcagccgcg acttcggcca
     5281 ggtgcatgcc ctgcgcgatg tcacactgac cgtcaaacgc ggcgagttcg tggctctgct
     5341 cggcccgtcc ggctgcggca agtcgactgc gctcaattgc atcgccggcc tgctgcaggt
     5401 gaccggcggg gcgatttatc tggacgatcg gcggctcgac gaactgggcc cggaagatcg
     5461 cggcttcggc atggtgttcc agaattacgc tttgttcccg cacatgtcgg tgcgccgcaa
     5521 cgtcggcttt ggcctggtaa cccagcgccg cccgcgggca gaaatcgccc gtcgggtcga
     5581 cgaggccctg gccctggtgc gcctggaggc ccaacgcgac cggctgccgg gccagctatc
     5641 cggcggtcag cagcaacgcg tggcgattgc gcgcgccatc gtggtcggtc cgccgctggt
     5701 gctgatggat gagccgttgt ccaacctgga cgccaagctc cgcctggaga tgcgggcaga
     5761 gatccgccgc atccacgcga tgctcggctg ttccacgatc tacgtgaccc acgaccagga
     5821 ggaggcgttg tcgctcgccg accgcatcgt cgtgatgatt gagggccagg cccgccagat
     5881 cggcacacct gaagaactct acgcccgtcc ggagaatgcc gaggttgcag aattcatggg
     5941 ttatcgcaac ctgttctcgg cggccaccga agcggtagac ggcggcattg cagtgcgcat
     6001 cggcggcgcc cggctaatgg gcacgccggt cggcccgatt tgcgctcggg ccacggtggc
     6061 gatccgccca gacgacatgc ggctgaccgc cggcggaccg atcgcggcaa cggtcgagat
     6121 cgccgagtat cacggtcgcg atttttatgc ggtggcgcgg ttggccgacg gtgctgaagt
     6181 gtatttccgc tgcgaccagc gcgtcgcagt gggtgagccg gtgcggctgg atgcggcgcc
     6241 atctcgtgtg ctggtctatg ccgcatgacc gctgcccgcc tgccgctac
//
LOCUS       DATAVD010000358         3056 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_219573, whole genome shotgun sequence.
ACCESSION   DATAVD010000358 DATAVD010000000
VERSION     DATAVD010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3056
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219573"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..233
                     /locus_tag="VHX39_06680"
     CDS             <1..233
                     /locus_tag="VHX39_06680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990840.1"
                     /translation="VYLAPAGSGHWGDNQALNDKDKEVDSSERLQIKDIERGRFDVKV
                     VDKAGRTCIKRDIDLGKDTTFDIRDSDLKDCH"
     gene            278..586
                     /locus_tag="VHX39_06685"
     CDS             278..586
                     /locus_tag="VHX39_06685"
                     /inference="COORDINATES: protein motif:HMM:TIGR02118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EthD family reductase"
                     /protein_id="HEX3990841.1"
                     /translation="MIVSVMYQVGSGHKFDLDYYMKTHVPLVGRLWGPAGLKGAQVLQ
                     GTGSPSGDPAMFHIIALLDFESLDAFKAAAAAHGKEVLGDIPNFTDVQPVIQFNDRLA
                     "
     gene            complement(640..1029)
                     /locus_tag="VHX39_06690"
     CDS             complement(640..1029)
                     /locus_tag="VHX39_06690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014242500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c family protein"
                     /protein_id="HEX3990842.1"
                     /translation="MSRWGMIIVALGCAVSVRAVAQDVAAGEKTFVVCRACHQIGPNA
                     KNFVGPVLNGVVGRPAGTYPGYDYSTANKTSGLTWDEATLQKYLANPQQVVKGTKMIF
                     PGIKDPAKVKDVIAFLKTYKADGSRTQ"
     gene            complement(1176..1430)
                     /locus_tag="VHX39_06695"
     CDS             complement(1176..1430)
                     /locus_tag="VHX39_06695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990843.1"
                     /translation="MLAGIDRPETAEVAMNIVELIVMVCSLLNPNACSEKHFSFESNG
                     SLKSCMMQAQPYLAQWAGEHPDDRIASYRCAWPGQERENL"
     gene            1616..2098
                     /locus_tag="VHX39_06700"
     CDS             1616..2098
                     /locus_tag="VHX39_06700"
                     /inference="COORDINATES: protein motif:HMM:NF023113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3280 domain-containing protein"
                     /protein_id="HEX3990844.1"
                     /translation="MAAAVLGGLLLAAPAARADAPRTAVFGFELDDTSLQGSMQGADK
                     ADQVRLQRLDGQLRAALAQSSRFDVVAVATDPSAPSWWTCDGCEVDAARKAGAAYSVV
                     GWVQKVSNLILNINIVVRDVKTGKRVAAGSVDIRGDTDESWSRGLSFLVRNRILNGGW
                     "
     gene            2469..>3056
                     /locus_tag="VHX39_06705"
     CDS             2469..>3056
                     /locus_tag="VHX39_06705"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3990845.1"
                     /translation="MRAATQASVAVTGDGENWLLVGASPDLRQQISQTPQLWPRSAGR
                     DSPITSVLLIGGDIDAIAGLLVLRERQPFTVYAPAELLDLLAANRVFDVLDPAVVRRV
                     PVRPGEPFECAGGMTVTLLSMPGKVPLFLEGDRNAVEPESAPGYAALVRAGGRRVIVA
                     PACADITDSVRGQLRQADVLFFDGTLFTDDEMIAAG"
BASE COUNT          554 a          819 c         1082 g          601 t
ORIGIN      
        1 gcgtttatct ggcgccggcc gggtcggggc actggggcga taaccaggcg ctcaacgaca
       61 aggacaagga agtcgattcg tcggagcgat tgcagatcaa ggatatcgaa cgcgggcggt
      121 tcgacgtcaa ggtcgttgac aaggcgggcc gaacttgcat caagcgtgac atcgacctcg
      181 gtaaggacac cacattcgat atcagggaca gcgatctgaa ggattgccat tgaagcagca
      241 agccggggca acggcatcag cgagaaggga gaacagcgtg attgtatcgg tcatgtatca
      301 ggttgggtcg ggtcacaaat tcgatctgga ttattatatg aaaacgcatg tgccgctggt
      361 tggccggctt tgggggccgg cggggctgaa gggtgcgcag gtgttgcagg gaaccggttc
      421 acccagcggc gatccggcga tgttccacat tatcgcattg ctggattttg aatcgctgga
      481 cgcgttcaag gccgctgccg ccgcgcatgg caaggaagtg cttggcgata tcccgaattt
      541 caccgatgtg cagccggtga ttcagttcaa cgaccggctg gcctgaggtc gaaccgaaac
      601 cgggggcgca caataggaat gcgcgcccgg cgccggcggt tattgggtgc gggagccgtc
      661 tgccttgtag gtcttcagga atgcgatcac gtccttgacc ttcgccggat ccttgatgcc
      721 ggggaagatc atcttggttc ccttcaccac ctgctgcggg ttggcgagat acttctgcaa
      781 ggtcgcctca tcccaggtaa gaccggacgt cttgttggcg gttgagtagt cgtagccggg
      841 gtaggttccg gccggccggc cgacaacgcc gttcaggacc ggaccgacga aattcttcgc
      901 gttcgggcca atctgatggc aggcgcgaca gacgacgaac gtcttttcgc ccgccgccac
      961 atcctgtgcg accgctcgga cggaaaccgc gcagccaagc gcgacgataa tcatacccca
     1021 acgcgacacg aaacctccca ccgttctctc aggaacgttg ccatataaaa ccgaggatga
     1081 tcggcttttt cgtgggtgat agtttcccga agcgtccggt gggtgtcaat cgccgggttg
     1141 ggtgggattt ttgtgcggag gaagggggtg cgggatcaga gattctcgcg ttcctggccg
     1201 ggccaggcgc agcgatagga ggcgattcga tcgtcggggt gctcgccggc ccattgagcg
     1261 aggtaaggct gcgcctgcat catgcagctt ttcagggagc cgttcgattc gaaactgaag
     1321 tgcttctcgg agcacgcatt cggattgagc agggagcaaa ccatcacgat gagctcgacg
     1381 atgttcatgg caacctccgc ggtttcgggc cgatcgatgc cggcgagcaa ggatgttgcc
     1441 gagccgggcg tgagcgaatg accattattt aagatattgt agccaccatg tgatcttaaa
     1501 gggtcgcgcg tcgcgggcga cggagtgtgg atactgtccg tggcgtccgg actggtaaga
     1561 atggcgttat ccgggtgctg gggagagaac aggggtcatg acatcggttc tgagggtggc
     1621 tgcggccgtg ctgggtgggt tgctgctggc cgcccccgcc gcgcgcgcgg atgcgcctcg
     1681 gacggccgtg ttcggcttcg agctggacga taccagcttg caagggtcga tgcagggggc
     1741 cgacaaggcg gaccaggttc ggttgcagcg gctcgacggg caattgcggg cggcattggc
     1801 gcaatcgtcg cggttcgacg tggttgcggt cgccaccgat ccgtcggcac cgtcctggtg
     1861 gacgtgcgac gggtgcgagg tggatgccgc gcggaaggcc ggtgccgcgt attcggtggt
     1921 cgggtgggtg cagaaggttt ccaacctgat cctgaacatc aacatcgtgg tgcgggacgt
     1981 gaagacgggc aagcgggtgg cggcgggcag cgtggatatt cggggtgata ccgacgagtc
     2041 ctggtcgcgc ggcctgtcct ttcttgtacg taaccgtatc ctgaacggcg gctggtagcg
     2101 gttgtacgga gagggcggcg gacgatccag tgcggcggcc gcgttcatac cacctttcct
     2161 gccggcggaa gatgcgctaa catcttgggc gctgggagct gtcgccccca gagtctttga
     2221 tttctcgaaa gaaaaagata ggagacgacc catggcatgg actcgcccga cactacgtga
     2281 aatctgcctc ggcatggaaa tcaacgggta ctttaccgcc cgcatctgat gacgcggctg
     2341 ttttgatcaa gcaaaactgg caacctaagc cggttgccgt cgtgcttggg tcggctgcag
     2401 gagggggttt tccacaatgg aattgtggat gccgccaatg cagtctggcc cgcacgggcg
     2461 actcgcgtgt gcgggccgcg acccaggcga gcgtcgcggt gaccggggac ggcgaaaact
     2521 ggctgctggt cggggcatcg ccagacctgc ggcagcaaat atcgcagaca cctcagcttt
     2581 ggccgcgctc cgcggggcgt gattcaccga tcacgagcgt gttactgatc ggcggcgaca
     2641 tcgatgcgat cgccgggttg ctggtgctgc gggaacggca gccattcacg gtctatgcgc
     2701 cggccgaatt gctggacctg ctggcggcca accgggtgtt cgacgtgctg gacccggcgg
     2761 tggtgcggcg ggtgccggtg agacccgggg aaccgttcga gtgcgccggc ggtatgacgg
     2821 tgacgctgct gtcgatgccg gggaaggtac cgttgttcct ggagggggac cggaacgctg
     2881 tcgagccgga atcggcaccg ggttacgccg ccctggtgcg ggccggtggg cgtcgcgtga
     2941 tcgtggcgcc ggcttgtgcc gacatcaccg attcggtgcg ggggcaactt cggcaggcgg
     3001 atgtgctgtt cttcgatggc acgttgttca ccgatgacga aatgatcgcc gcgggg
//
LOCUS       DATAVD010000359         4473 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_405993, whole genome shotgun sequence.
ACCESSION   DATAVD010000359 DATAVD010000000
VERSION     DATAVD010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4473)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4473
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405993"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..1034
                     /locus_tag="VHX39_06710"
     CDS             141..1034
                     /locus_tag="VHX39_06710"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX3990846.1"
                     /translation="MLTAAQIEEYNEVGAIIVPDVLTGEEVAGLRAVTDSFVEQARGV
                     TAHNEIYDLEDSHTAENPRVRRIKTPHLHDPAYAALVRHPKILAVLRDLWGPDIRFDT
                     TKLNLKCAGFGAPVEWHQDWAFYPHTNDDLAAVGVMCDDMAMENGPLMIIPGSHRGPI
                     YDHHAEGVFCGAMNPENRDVDYRSALPLLGKAGSITVHHVRAIHGSAPNVSDRDRRLL
                     LLQFRAADAWPLLGFRDGIEKFNSLMVAGESREPRLEHLPVRLPLPPAAKQGSLYENQ
                     KGMTHRFFAVPETARAVEMAK"
     gene            1031..2485
                     /locus_tag="VHX39_06715"
     CDS             1031..2485
                     /locus_tag="VHX39_06715"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX3990847.1"
                     /translation="MSGRLPVEPIFDQTPHLFGDGPPDPVVYDASERALRQRTVNFAA
                     KRYVDMMFVSGLDRATADRHFRPRAATVPAGLSGRPAGVALQDSLRAAHKSGRLVVET
                     DPSARRVTVTWSDPAFGELVKGSAAAYPGYGGIVLGEHLAPKFEPRTIARQTGDASRA
                     WPIGNAVEKPPAAMAAALDAFFASSPGTYGVLIGSPDRVLAERYSEFGAPDRATPSWS
                     MTKAITCTVIGRMIHEGWLHSIHDPAPAPLWRDPRGIHRLIRLDHLVRMRSGLGFPVR
                     HADGSVTLGFENSAVYQDAADAFDTAQRMIVATAPGSVFRYINSGMNVLGSVIRDQIV
                     RRGLPYHQTLYAMLADRLGMSSYQHSADIVGNLIGSGAGFATLRDYAKLGVLYLNDGV
                     WNGERLLPDGWVDYATTATHTGTSYAACFRTNIDGRFPSLPAETAWAAGASDNRVFIL
                     RRHRLTVAVSNESDHPMDLVALDKMIAAAIATFA"
     gene            2498..3280
                     /locus_tag="VHX39_06720"
     CDS             2498..3280
                     /locus_tag="VHX39_06720"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX3990848.1"
                     /translation="MTVRNVAREKLEKDQLSLGVGVRMTRSVEIAAAMVSAGFDWLFL
                     DMEHGTMSLDACAQIAAAALEAGITPIARVPNGQYSIATRALDNGALGIVMPHVDTAA
                     EAREVVERLKYPPVGHRSMGGTGPHYSLRNASAGDAAKALNAANLTVVMLETPTAIAN
                     ADEIAAVPGVDVLLIGTNDLCAEMGIHGDFGNERVADAYGKMIAACKKHKKFPGMAGI
                     YNETIMPRYIEMGARFILSGQDANFMLAAAGARTAFLHKLHA"
     gene            complement(3293..3757)
                     /locus_tag="VHX39_06725"
     CDS             complement(3293..3757)
                     /locus_tag="VHX39_06725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic-ring-hydroxylating dioxygenase subunit
                     beta"
                     /protein_id="HEX3990849.1"
                     /translation="MIDRDTLRDFYDDYYTVLDDLRLDEWPAFFAEDCLYRVIPRENY
                     EAGYTLSTIYAESRGMLIDRVMGLTRTQMYAPRYYRRFPGPLKIVARDGETVRVRHNL
                     LVVQTLIDKKTEIVLSAVCHDLLVPGDERPLLRQRIVVFDSEMLPNSLIYPA"
     gene            complement(3754..>4473)
                     /locus_tag="VHX39_06730"
     CDS             complement(3754..>4473)
                     /locus_tag="VHX39_06730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX3990850.1"
                     /translation="ERFWQHYTRVYDGRKLEIMGYNRQHIPGNWKLMQENIKDPYHAS
                     LLHVFFVTFGLFRADQKSATEIDPTGRHGILISRTGKQEVNDVTSGMRTFRNDITLAD
                     TRIMEGVKEFPGDDTVGMITVFPSVVLQQNINSLSTRHIVPTGPDGFDFHWTHWCYAD
                     DPPEMRLRRMRQANLFGPAGFVSADDGEIIEMSQQGFSHSPDEDALVIMGGREIESVE
                     HMVTEVGIRGMYRYWRSAMGL"
BASE COUNT          864 a         1319 c         1410 g          880 t
ORIGIN      
        1 agaggggatg ttctgaagag ggggatgttc tgaagaacag acgctcgggc cacgacgttc
       61 gtgacacgtc gtccgccgct tgtggcggcc tgtgtcccgg tgcgctacac tggaggaaat
      121 ctttggctca ggagaacgtc atgctcactg ccgcgcaaat cgaggaatac aacgaggtcg
      181 gcgccatcat cgtgccggac gtgctgaccg gggaagaggt cgccggcttg cgcgcggtga
      241 ccgacagctt tgtcgaacag gcgagggggg tgaccgccca caacgagatc tacgacctcg
      301 aggacagtca tacggcggaa aatcctcggg tccggcggat caaaaccccg catctgcacg
      361 atccggccta cgcggcgctg gtccggcatc cgaagatcct ggcggtgctg cgtgacctgt
      421 gggggccgga cattcgcttc gacacgacca aactcaatct gaagtgcgcc gggttcggtg
      481 cacccgtgga atggcatcag gactgggctt tttacccgca caccaatgac gatctcgcgg
      541 ccgtcggcgt gatgtgcgac gacatggcga tggagaatgg tccgctgatg atcattccgg
      601 gcagccatcg cggcccgatc tacgaccacc atgccgaagg cgtgttctgc ggcgcaatga
      661 acccggaaaa ccgcgacgtc gactacagaa gcgcgctgcc gttgttgggc aaggcgggct
      721 cgatcacggt gcatcatgtg cgggcgatcc acggctcggc gccgaacgtt tcggatcgtg
      781 accggcgtct gttgctgctg cagttccgtg cagcggatgc ctggccgctg cttggcttcc
      841 gcgacgggat cgagaaattc aacagcctga tggtggccgg cgaatctcgg gaacccaggt
      901 tggagcattt gccggtaagg ctgccgctgc cgccggcggc gaagcaaggc tcgctgtatg
      961 agaaccaaaa gggcatgacg caccggttct ttgccgttcc ggagaccgct cgcgcggttg
     1021 agatggcgaa atgagcggtc ggctgccggt cgaaccgatc ttcgatcaga cgccgcatct
     1081 gttcggcgat ggaccaccgg atccggtggt ctacgacgcc tcggagcgcg cgttgcggca
     1141 gcgcacggtc aatttcgcgg cgaaacgtta cgtcgacatg atgttcgtca gcggactgga
     1201 tcgcgccacg gcagaccggc attttcggcc gcgagcagca accgttcctg cgggcctgtc
     1261 ggggcgccca gcgggtgtgg cgttgcagga ttcattacgt gcggcacaca aatccggacg
     1321 tttggttgta gagaccgacc cgtctgcgcg tcgcgtgacg gtaacctgga gcgatccggc
     1381 gttcggcgag ctggtcaagg gcagcgcagc cgcttatcca ggttatggcg gcatcgttct
     1441 cggcgagcac cttgcaccga agttcgagcc gcgaactatt gctcggcaaa ccggggatgc
     1501 cagccgcgcc tggccaatcg gcaatgcagt ggaaaagccg ccggccgcga tggcagcagc
     1561 tttggacgcg ttctttgcca gttcacccgg tacttatggc gtgctgatcg gctcaccgga
     1621 tcgggtattg gccgagcggt acagcgaatt tggcgcacct gatcgcgcga cgccgagttg
     1681 gtcgatgacc aaggccatca cctgcacggt gatcggacgg atgatccacg agggatggtt
     1741 gcattcgatc catgatccgg caccggctcc tctgtggcgc gatccgcgag gcatccatcg
     1801 gctgatccgg ctggatcatt tggtgcgcat gcgatccggc ctcggatttc cggttcgcca
     1861 tgcggacggt tcggtcacgc tcgggttcga gaacagcgcg gtttatcagg atgcggccga
     1921 tgcgttcgac acggcgcaac ggatgatcgt tgccaccgcc ccgggctccg tgttccgcta
     1981 tatcaacagc ggcatgaatg tattgggctc ggtgatccgt gaccagatcg tgcggcgtgg
     2041 tttgccgtat catcaaactc tgtacgccat gctggccgat cgcctcggca tgagcagcta
     2101 tcaacattcc gccgatatcg tcggcaacct catcggctcc ggtgccggat tcgcaacgtt
     2161 acgcgactat gccaaactgg gcgtactgta tttgaacgac ggcgtttgga atggtgagcg
     2221 attgctgcct gacggctggg tcgactatgc aacgactgcg acccacaccg gcaccagtta
     2281 cgccgcctgc ttccgcacca acatcgacgg gcggttcccg tcgctgccgg cggagaccgc
     2341 gtgggctgcg ggtgcctcgg acaaccgggt gttcattctg cggcggcatc ggctgaccgt
     2401 cgcggtcagc aacgaatccg atcatccgat ggatctcgtg gcgctcgaca agatgatcgc
     2461 cgccgccatc gccactttcg cctgaggaat tcaaccaatg accgttcgta acgtcgctcg
     2521 cgagaaactc gagaaagacc agttgtcgct tggcgttggc gtgcgtatga cgcgcagcgt
     2581 ggagatcgct gcggcgatgg tatcggccgg cttcgactgg ctgttcctgg acatggaaca
     2641 tggcacaatg tcgctcgatg cgtgcgcgca gatcgctgcc gcagcgttgg aggctggtat
     2701 tacgccgatc gcgcgtgtgc caaacggaca atattcgatt gccacccgag ccttggacaa
     2761 cggtgcgctg ggcattgtca tgccgcatgt cgataccgct gcggaggcgc gcgaggtcgt
     2821 cgagagactg aaatacccgc cggttgggca tcgctcgatg ggcggtaccg ggccgcacta
     2881 cagtcttcgc aatgccagcg ccggcgatgc tgcgaaagcg ttgaatgcag caaacctgac
     2941 cgtggtgatg ctggaaacgc cgaccgcgat cgccaatgcc gacgagatcg ccgcggttcc
     3001 gggagtcgat gtgttgctga tcggtaccaa cgatctgtgc gccgagatgg gaattcacgg
     3061 cgatttcggc aatgaacgag tcgcagatgc ttatggaaag atgattgcgg cgtgcaaaaa
     3121 gcacaagaaa ttccctggca tggcgggcat ttacaacgaa acgatcatgc cgcgctacat
     3181 cgagatgggc gcccggttca tcctgtccgg ccaggacgcc aatttcatgc tggcggcggc
     3241 gggtgcgcgg accgcgttct tgcataagct gcacgcctga agcgggcaga ttttacgccg
     3301 gatagatcag gctgttcggc agcatctcgg aatcgaagac cacgattctc tgccgtaaca
     3361 gaggccgctc gtcaccaggc accagcagat cgtggcacac cgccgacagc acgatctcgg
     3421 ttttcttgtc gatcaacgtc tggaccacca gaagattgtg acgcacgcga accgtttcgc
     3481 cgtctcgcgc aacgatcttc agcggtccgg gaaaccggcg ataataccgc ggtgcgtaca
     3541 tctgagtccg ggtcagtccc ataacccggt cgatcagcat gccccggctt tctgcataaa
     3601 tcgtcgaaag tgtgtagccg gcctcgtaat tttcgcgcgg gatgacgcga taaaggcagt
     3661 cctccgcaaa gaatgccggc cattcgtcga gccgtaaatc gtccagcaca gtgtaataat
     3721 cgtcgtagaa atcgcgcagc gtgtcgcggt cgatcatagc cccatcgccg aacgccagta
     3781 acgatacatt ccgcggatgc cgacttcggt gaccatgtgt tccacgctct cgatttcccg
     3841 gccgcccatg atcaccaggg catcctcatc cggcgaatgg gaaaacccct gctggctcat
     3901 ctcaataatt tcaccatcgt ccgccgaaac aaatcccgct gggccgaaca aattggcctg
     3961 gcgcatgcgc cgcagccgca tctcgggagg atcgtcggca taacaccaat gggtccagtg
     4021 gaagtcgaac ccgtcaggcc cggtcgggac gatatgacgg gtactgagcg aattgatgtt
     4081 ctgctgcagc accacgctgg ggaacacggt gatcatgccg acggtgtcgt cgccggggaa
     4141 ttccttcaca ccctccatga tgcgtgtgtc ggcaagcgtg atatcgttgc ggaacgtgcg
     4201 catgccggag gtgacgtcgt tgacctcctg cttgccggtg cgactgatca ggatgccatg
     4261 ccgtccggtt gggtcgatct cggttgccga tttctggtcg gcccggaaca acccgaaggt
     4321 cacaaagaac acgtgcagca atgaagcatg gtacgggtcc ttgatgttct cctgcatcag
     4381 cttccagttg cccgggatgt gctgacgatt gtagcccatg atttccagct ttcgcccgtc
     4441 atagacgcgc gtgtagtgct gccagaaacg ttc
//
LOCUS       DATAVD010000360         4702 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_406092, whole genome shotgun sequence.
ACCESSION   DATAVD010000360 DATAVD010000000
VERSION     DATAVD010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4702
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_406092"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1204)
                     /locus_tag="VHX39_06735"
     CDS             complement(<1..1204)
                     /locus_tag="VHX39_06735"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990851.1"
                     /translation="MTQPVHNTTGLRTLLTTPAFLRLWAIGGCVNTMRFFELLAAALF
                     TLDVTGSGLAVAVVSASRTMPMLLFGAFSGVVTESVSRKHVLQIGQLLTCASAVIIAT
                     LAVLGLVRPWHLAVASFVSGMVWSTEMATRRRMVGESVDGHLVSRALALDTMSNSGAR
                     LVGPIAAGIVYQHLGIAGSYGVSAVVYAVAAWITRGVRYHQQSRRFVVAQVPRDLAEG
                     VAFARGHITIAGVLAVTIAMNLLAFPYSALVAPIGRQVFFVSPTLVGILAASEAFGAF
                     LGGMWLSGGEPRLTGRTLMVGGSLLFVACVFLMPLAPAFPLACSLLSIGGFGSAAFAN
                     MQTSLIVLHAPAPIRSRLMGLLTVCIGMGPLGILLVGFLADRVGPMRAIDIVESACFV
                     WVIWIGLRW"
     gene            complement(1301..2020)
                     /locus_tag="VHX39_06740"
     CDS             complement(1301..2020)
                     /locus_tag="VHX39_06740"
                     /inference="COORDINATES: protein motif:HMM:NF036686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990852.1"
                     /translation="MIQIERRHFGVLVPSTNTTVEIEYTNYLPASLQFHTARLGKGSA
                     GPFSPGKDEDVIYQSKMLGDAKVEVVALAQTSASLFDDGYDAKVKAYMSKNAGVPGIT
                     SAEAIGEAIQALRMKRIGIVTPYSTQVIESAKRYYERKYGLQVLGMESLGATDSYAIA
                     KFDANVAFEGMRRVNRPDIELLIVPGGNFPTLPWIAEWERVLGKPVITTNQAALWGAL
                     GVMKLNYPLPGLGRLLEQMPR"
     gene            complement(2086..2949)
                     /locus_tag="VHX39_06745"
     CDS             complement(2086..2949)
                     /locus_tag="VHX39_06745"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX3990853.1"
                     /translation="MPRIVLLPVSGSTADPEVFAMALAVARLFDSHLVALHVRPDVRR
                     DIASLAASDGGMTSGIDTLMEQMETDADKREKAASDGWHAFCSQNKIAGTETAGTTGL
                     TAEWVSEVGVEADWLAEYGRTADLIVVGRGQEKWGPDYVLMEAALMDTGKPVLIAPRA
                     AGPAMNGVVGIAWKDTRESAGAVRAAMLFLEAAAQVIVFIVPEGEDGDKSHLRLVRML
                     RWHNANITIQSLHGEDQAPAALLQDAAMKAGCGLLVMGGYGHTRLREAVFGGFTRAML
                     EAAPLPVLMAH"
     gene            complement(2983..4032)
                     /locus_tag="VHX39_06750"
     CDS             complement(2983..4032)
                     /locus_tag="VHX39_06750"
                     /inference="COORDINATES: protein motif:HMM:TIGR03476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HEX3990854.1"
                     /translation="MKQLSYVLALAGVLIGVVLVAYFGVGNVVTAISRIGWPQFALIV
                     GWQLVLFVVLGIAWDIIMPAREGRRFWVPIWGRMVRDAAANCLPFSQVGGFIFGARAV
                     TLQNVEWHTATASTVVDVTAEFLAQIVFACIGLAILILRVPSSKIAGPVEAGIGLAVA
                     ACFGFIWVQKGVGSIFARLGTRIAGSRFEDAKERVDVLQAELGLIYGHTTRLAIGVFV
                     HLIGWICTGVACWIGYHALGVPIDFDDAMAIEALLSAAAAVAFLVPVNAGVQEAGYAG
                     LGAVFGVSPELSLGVSLVRRGRDIVVGVPILLLWQAIEMRHLRRIAAQQSGETATHSA
                     VPVRRPGIRESQPME"
     gene            4136..>4702
                     /locus_tag="VHX39_06755"
     CDS             4136..>4702
                     /locus_tag="VHX39_06755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019088854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX3990855.1"
                     /translation="MTTLITGATGFVGSAVARTMARRGHALRLLVRQSSDRRNLDGVD
                     ADVVTGDLTDPASLARAAAGCRYVIHVAADYRLWVPVPEDMMRANVDGAVAMIRAAAD
                     AGAERIVHCSSVAALGQIGDGTPADEATPTNEADFVGIYKRSKYRAERAVLELAARES
                     LPVVVVNPAAPVGPRDIKPTPTGKMVLDT"
BASE COUNT          969 a         1615 c         1391 g          727 t
ORIGIN      
        1 gccagcgcag gccgatccag atgacccaga cgaagcacgc actctcgacg atatcgatgg
       61 cccgcatcgg gccgacacgg tcggccagaa acccgaccaa caggatccct aacggcccca
      121 taccgataca gaccgtcaac aatcccatca accgcgagcg tatcggcgcc ggtgcgtgca
      181 gcacgatcaa ggacgtctgc atgttggcga acgccgcgga gccgaagcct ccaatggaca
      241 acagactgca cgccaaggga aaggccggcg ccaatggcat gagaaacaca caggcaacga
      301 acagcagcga gcccccgacc atcaaggtcc ggccggtcaa acgcggctca ccgccgctca
      361 gccacatgcc acccagaaaa gcgccaaagg cttcggaggc ggccaggatt ccgaccaatg
      421 tcggggacac gaagaacacc tggcggccaa tcggtgcgac cagtgcggag tatggaaacg
      481 ccagcaggtt cattgcgatg gtgaccgcca gcacacccgc aatggtgata tggccacgtg
      541 caaaagccac cccttccgcg aggtcgcgcg gcacctgggc gaccacgaac cgccggcttt
      601 gctgatggta acgcacacca cgggtgatcc atgccgccac agcataaacc accgcggaaa
      661 cgccgtaaga tccggcaatg cccagatgct ggtaaacgat accggcggcg atcggtccaa
      721 ccagccgcgc acccgagttc gacatcgtat cgagtgccag ggcgcgcgag accaggtgcc
      781 cgtccacact ctcccctacc atgcggcggc gcgttgccat ttcggtcgac cacaccatcc
      841 ccgaaacaaa cgatgcaacc gccaggtgcc atggccggac cagccccaga accgccaacg
      901 tcgcaatgat gacggcagac gcgcaggtca gcagctgacc gatttgcaag acatgtttgc
      961 ggcttaccga ctcggtcacc acgccggaga aagcgccgaa caacaacatc ggcatggtgc
     1021 gagatgccga aacgacggcc accgcgaggc cggatccggt gacgtccagg gtgaacaagg
     1081 ctgctgccag cagctcgaag aatcgcatgg tgttgacgca gccgccgatc gcccaaaggc
     1141 gcaggaatgc cggcgtggtc agcagcgtgc gcagtccggt cgtgttgtgg accggttgcg
     1201 tcatgcgccg cgaggtggcc gggacaagcc cagcagggac aagcccagcc gggacaagcc
     1261 cagccgggac aagcccagac gtgacgaccg caacaccgtg tcagcgcggc atctgctcca
     1321 gcaaccgccc cagtccgggc aacggatagt tgagcttcat gaccccaagc gcaccccaca
     1381 gcgccgcctg attggtggtg atcaccggct tgcccaacac gcgctcccac tccgcgatcc
     1441 acggcaaggt cgggaagttg ccacccggaa cgatcagcag ctcgatatcc ggccggttga
     1501 cccgtcgcat gccctcgaac gcgacattgg catcgaattt ggcgatggcg taggagtcgg
     1561 tggcacccag gctctccatg cccaacacct gaagtccata cttccgttca tagtatcgct
     1621 tcgcgctttc gatcacctgg gttgaataag gcgtgacgat gccaattcgt ttcattctca
     1681 gtgcctggat tgcctcgcca atggcctcgg ccgaggtgat gcccggcacg ccggcatttt
     1741 tcgacatata cgccttcacc ttggcatcgt acccatcgtc gaacaggctg gccgaggtct
     1801 gcgcgagagc cacgacctcg accttggcat cgcccagcat tttggactga tagatgacgt
     1861 cttcgtcttt gccgggagag aaggggccgg cgctgccttt acctaaacgg gcagtgtgga
     1921 actgcaagct tgcaggcagg taattggtat attcgatttc gactgtggtg ttggtagacg
     1981 ggaccagcac gccgaaatgc cgccgttcga tctggatcat tttaacctca acctcccttg
     2041 gagaaaccac gcggaggcgt cgcacctcca cgcggcgaac gcaagtcagt gtgccatcag
     2101 caccggcagc ggcgccgctt ccagcatggc gcgagtgaag cctccgaaca ccgcctcccg
     2161 cagccgcgtg tggccatagc cgcccatcac cagcagccca cagccggctt tcatcgccgc
     2221 atcctgcaac aacgcggcgg gcgcctgatc ctcgccatgc aacgactgga tcgtaatgtt
     2281 ggcattatgc cagcgtaaca tcctgacgag ccgaaggtgc gacttatcgc catcctcgcc
     2341 ttccggcacg atgaacacga tcacctgagc agcggcctcc aggaacagca tcgccgcccg
     2401 tactgcgcca gccgattcgc gggtgtcctt ccaggcgatc ccaaccacgc cattcatcgc
     2461 agggcccgcc gcccgaggcg caatcagcac cggcttgccg gtgtccatca gagccgcctc
     2521 catcagcacg taatccgggc cccatttctc ctggccgcgt ccaaccacga tgaggtcggc
     2581 agtgcggcca tattcggcca gccagtccgc ctcgaccccg acttcgctca cccactcggc
     2641 agtcaaaccg gttgtcccgg cggtttcggt accggcgatt ttgttctggg aacaaaacgc
     2701 atgccagcca tccgaggcgg ctttttcccg cttgtcggcg tcggtttcca tttgctccat
     2761 caacgtatcg atgccggacg tcataccgcc gtcgctcgcc gccagggagg cgatgtcacg
     2821 gcgcacatcg ggccggacat gcagtgcgac cagatgcgaa tcgaacaagc gcgccacggc
     2881 cagggccatg gcaaaaacct ccggatcggc agtcgagccg ctcaccggca gcaatacaat
     2941 cctgggcatg cggacctccg gagcttcagt gtcccggcat tcctactcca taggctgact
     3001 ttcgcgaatg ccaggccgtc gcaccggcac tgcactgtgc gtcgcggtct caccgctctg
     3061 ctgcgcggcg atccgccgta aatgccgcat ttcgatcgcc tgccacagca gcaggatcgg
     3121 caccccgacc acgatgtcgc gccctctgcg gaccagcgaa acgcccagag agagctccgg
     3181 cgacacaccg aacaccgcgc ctaagccggc gtaacctgcc tcctgcacac cggcgttgac
     3241 cggcaccaga aacgccacgg cggcggcggc actcaacagc gcctcgatcg ccatcgcgtc
     3301 gtcgaagtcg atcggcacac ccagcgcatg atagccgatc cagcaggcca ccccggtgca
     3361 aatccagccg atcaggtgca caaacacacc gatcgcaagc cgtgtcgtgt ggccatagat
     3421 caatcccagt tctgcctgca gcacgtccac gcgttccttg gcgtcctcga acctggatcc
     3481 cgcgatacgg gtgcccaatc gggcgaagat tgagccgaca cctttctgga cccagatgaa
     3541 gccgaagcag gctgccaccg cgagcccgat ccccgcctcc accggtccgg caattttgga
     3601 actgggcaca cgcaagatca gaatcgcgag gccaatgcag gcgaacacaa tctgggccag
     3661 gaactcggcg gtcacgtcga ccacggtcga ggcggtggca gtgtgccact cgacgttctg
     3721 caatgtgacc gcgcgggcgc cgaagatgaa gccgccgacc tgggaaaacg gtaggcagtt
     3781 ggcggcggcg tcgcgcacca tgcggcccca tatcggcacc cagaagcggc gtccctcgcg
     3841 ggccggcatg atgatgtccc aggcgatgcc aaggacaacg aacagcacca actgccatcc
     3901 gacgatcagc gcaaactggg gccagccaat gcggctgatc gcggtcacga cgttgccaac
     3961 gccgaaatac gccaccagga cgacgccgat cagcacgccg gccagtgcaa ggacatagga
     4021 cagttgcttc atcgccgccg cttctgcccg tgcgggcagg gtggagcaag cccgcggccc
     4081 cccgcaaccg acgtcgcctt tccctgtatg tgcgggaacg tctatggaac gggcgatgac
     4141 aacgctgatc acaggtgcca ccggcttcgt cggctccgcg gtcgcccgaa ccatggcacg
     4201 ccgaggccac gccttacggc tgctggtgcg gcaatcgagc gaccggcgca acctggacgg
     4261 ggtcgatgcg gacgtcgtca ccggcgacct gaccgacccc gcctcgctcg cccgcgccgc
     4321 tgccggctgc cgctatgtca ttcatgtcgc tgcggattac cggctttggg tgccagtccc
     4381 ggaggatatg atgcgggcca atgtcgacgg cgccgtagcg atgatccggg ccgccgccga
     4441 tgccggtgcg gaacgtatcg tgcattgcag ttcggtcgcc gctctgggac agatcggcga
     4501 cggcactccg gcggacgagg caaccccgac caacgaggcc gatttcgtcg gcatctataa
     4561 acgctccaag tatcgtgccg agcgggccgt gctggaactt gcggcacgcg agtcgctgcc
     4621 ggtggtcgtg gtcaatccgg ccgcgccggt ggggccgcgg gatatcaagc cgaccccgac
     4681 cggcaagatg gtgctggata cc
//
LOCUS       DATAVD010000361         3341 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1710704, whole genome shotgun sequence.
ACCESSION   DATAVD010000361 DATAVD010000000
VERSION     DATAVD010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3341
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1710704"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            186..1406
                     /locus_tag="VHX39_06760"
     CDS             186..1406
                     /locus_tag="VHX39_06760"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX3990856.1"
                     /translation="MRHRTLLDDRHVFRESEYLAIYPGIAEAIEKRNFPSGWAHYQEF
                     GRVEGRAPCLFEETFYLRSYPLVGTELAEGRTGSAFDHYVLFGRGRGYLPHPKAERPS
                     NPSGGLWIDSGDASDRIRGRYETGQITEHQAALLEAFVCNGYVVMPAVVPDSVLQAAA
                     TDLERGYRGEIPQLRFQCDALGHGSGPWRPEMLSEATKALDIHYCSKPIRQLIFTPAI
                     AAFLALIFESKALASQTLGFLRGSADAIHQDTAYVPYTCPTSFAASWIALEDVSPGGG
                     ELFYHPGSHRLPDFRYDGKFKSQHEAMRANSNLEGNQAANHQRSLLDNANRFGLERKQ
                     FAAKRGDVLIWHADLVHGGSPVSERLTRKSIVTHYCPRHHAPLFCEQHQVALHEHEGH
                     LFTSSHYAGMSPAD"
     gene            complement(1432..2379)
                     /locus_tag="VHX39_06765"
     CDS             complement(1432..2379)
                     /locus_tag="VHX39_06765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HEX3990857.1"
                     /translation="MVDPFDITAGWLEEHLLIPALYQFGLMNWEDVSYGWALFAVYGA
                     VQVAITFAVCLPLERWRPVERWPDSGAVWVDVIYTVVSRVGILPLVTYVMFYRAQVFV
                     TGWITDEGWVPPTLEGIFPFLLGRQVITFVLYAIILDCAEYWRHRLSHQFRWWWALHS
                     LHHAQRQMTFWSDDRNHLLDDVISFVWFGFIALLIGVSPLQFPLLVLVLRFLESLSHA
                     NVRLSFGWLGDRLLVSPRFHRAHHGVRAAGDRSCNYGAVLPWWDMLFGTADFARDYVQ
                     TGDPSGEEALATGTYWQQQMAGLRRFIRSFGRRRVRLGL"
     gene            complement(2379..>3341)
                     /locus_tag="VHX39_06770"
     CDS             complement(2379..>3341)
                     /locus_tag="VHX39_06770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HEX3990858.1"
                     /translation="RLTVLLFLSFMTLAGLSPAWARGIAFIVNSGGASISVIDMATHK
                     EVRRIPALREPHHVALSPDGHSLLVGDTTGNQMMFLDPNTGEVQKRMPITDPYQLGFS
                     PNGKFLTVNGLARNQVDIYDAATMKLIKRFPVVATPSHLAYSPDSSTVFVSLQDSNKL
                     EAFDLRTMTEKWAVPIGKTPAGVLWLNGKVLVADMGTDYIAVVDPETGKVLEHVVTGK
                     GAHQLFLSPNGKILWVNNRAGGTTVSLDSTTLKLIRRYAIPGGPDDLAFAPDGKIWIT
                     RRWAEKVAILDPVTGSYDTIDVGRSPHGLFLNPNAPSLTVLSSR"
BASE COUNT          709 a         1093 c          968 g          571 t
ORIGIN      
        1 gacaagccgg aatggcagca cacccaggac tactggacgg aacaggagac gttccccgcg
       61 atcgacctgg acgatgaggt gttcgtttac gggtgaaacc atcggcatcc tgtgtcgtca
      121 cgatgccacc ccggtcgaca tcgacaccgt cggcagattg gcggccgttt cgggcggagg
      181 gagatatgag gcaccgtacg cttctcgacg atagacatgt atttcgtgaa tccgaatacc
      241 tcgcgattta tcccggtatc gcggaggcga tcgagaagcg gaactttcca agcggatggg
      301 cccattatca ggagtttggc cgcgtcgagg gccgcgcgcc gtgtcttttc gaggaaacgt
      361 tttacctccg ctcctatccg ttggtcggaa ccgaacttgc cgagggccga accgggagcg
      421 cattcgatca ttacgtgttg ttcggtcgcg gtcgcggcta cttgccacat ccgaaggccg
      481 agagaccgtc gaatccctcg ggcggcttgt ggatcgactc gggggacgcc tcggaccgca
      541 tacgcggtcg ttacgagacc ggccagatta ccgaacatca ggcggcattg ctggaagcgt
      601 tcgtttgcaa cggctatgtg gtgatgcccg cggttgttcc cgattccgtg ctgcaggcag
      661 cagcgacgga tctcgaacgg ggctatcgtg gcgaaattcc gcaactgcga tttcaatgcg
      721 atgccttggg ccatggatcg ggaccgtggc ggcccgagat gctgtcggaa gccaccaagg
      781 cgctggacat ccactactgt tcgaagccga tccggcaact catcttcaca ccggcgattg
      841 ccgcgtttct ggcattgatt ttcgagagca aggccctcgc ctcgcagaca ctcggctttc
      901 tgcgcggttc cgccgatgcg atccaccagg acaccgcata cgtgccctac acatgcccga
      961 caagcttcgc cgcatcttgg attgccctgg aggacgtaag ccccggaggc ggagaactct
     1021 tctatcatcc cggaagccat cgcctgccgg attttcgcta cgatggaaaa ttcaagagcc
     1081 agcatgaggc gatgcgcgcc aacagcaacc tggaaggcaa ccaggcagcc aaccatcagc
     1141 ggtcactgct ggacaacgcc aaccgatttg gtctcgaaag aaagcaattt gccgccaagc
     1201 ggggggatgt gctgatctgg cacgcggacc tggtgcatgg aggcagtccc gtgtcagaac
     1261 gactcaccag aaaaagtatc gtgacacact attgtcccag gcatcatgcg ccactgttct
     1321 gcgagcagca tcaggtggcg ctgcacgaac atgaaggtca cctgttcacc agcagccact
     1381 acgccggaat gtcgccggcg gattgacgtt atggtgccac cgggcgaacg ctcacagtcc
     1441 cagccgtacc ctgcgccgcc cgaagctgcg gatgaagcgc cgcaaacccg ccatctgctg
     1501 ctgccagtat gtccccgtcg ccagcgcttc ctcacccgag ggatcgccgg tctgcacgta
     1561 gtcgcgcgca aaatcggcgg tgccgaacag catgtcccac caaggcagca ccgcaccata
     1621 attgcagctt cggtccccgg cagcccttac accatgatgc gcccgatgga accgcggcga
     1681 caccagcagc ctgtccccca gccaaccgaa cgacagccgc acattggcat gcgacagcga
     1741 ttcaaggaac cgcagcacca gcaccagcaa cggaaactgc agcggggaaa caccgatcag
     1801 cagcgcgatg aacccgaacc agacgaatga gatgacatcg tccagcagat ggttccggtc
     1861 atccgaccag aaggtcatct gccgctgcgc gtggtgcagg gaatgcagcg cccaccacca
     1921 gcgaaactgg tgcgacagcc gatgccgcca atactcggcg cagtccagga tgatcgcata
     1981 caacacgaac gtgatcacct gccgccccag caggaagggg aaaatgccct ccagagtcgg
     2041 cggaacccag ccctcgtcag tgatccagcc ggtcacgaac acctgcgccc ggtaaaacat
     2101 cacgtaggtc accagcggca gaatgcccac ccgcgacacc accgtgtaga tcacgtctac
     2161 ccagacggcg ccgctgtccg gccagcgctc gaccgggcgc catcgttcca gcggcaggca
     2221 gacggcgaag gtgatcgcca cctgcaccgc cccataaacc gcgaacagcg cccagccata
     2281 cgacacgtcc tcccagttca tcaggccgaa ctggtacagc gcggggatca gcagatgctc
     2341 ttccagccac cccgcggtga tgtcgaacgg atcgaccatc agcggctgga caggaccgtc
     2401 agcgacggcg cattcggatt caggaacaac ccatgcggcg accggcccac atcgatcgta
     2461 tcataggaac cggtcaccgg atcgaggatg gccactttct ccgcccaccg gcgcgtgatc
     2521 cagatcttgc cgtccggcgc gaacgccagg tcatccggcc cacccggaat cgcataccgg
     2581 cggatcagct tcagcgtcgt cgaatccagc gacaccgtcg tcccgcccgc tcggttgttg
     2641 acccacagga tcttgccgtt cggcgacagg aaaagctgat gcgcgccctt gccggtcacc
     2701 acgtgctcca gcaccttgcc ggtctccgga tcaaccaccg cgatataatc ggtgcccata
     2761 tcggccacca gcaccttgcc gttcagccac agcacgccgg ccggggtctt gccgatgggc
     2821 accgcccact tctccgtcat cgtccgcaga tcgaacgcct ccagcttgtt gctatcctgc
     2881 aagctgacaa aaaccgtcga ggaatccggc gaatacgcca aatggctcgg tgtcgcaacg
     2941 actgggaagc gcttgatcag cttcatcgtc gccgcgtcgt agatatccac ctggttgcga
     3001 gccagcccgt tcaccgtcag gaacttgccg ttcgggctga atcccaactg atacggatcg
     3061 gtgatcggca tgcgcttctg cacctccccc gtgttgggat cgaggaacat catctggttg
     3121 ccggtggtgt cgcccaccag caggctgtgc ccgtcgggac tcagcgcgac gtggtgcggc
     3181 tcccgcagcg ccgggatgcg acgcacctcc ttatgcgtgg ccatgtcgat cacgctgatc
     3241 gatgcgccac cggaattgac gatgaaggcg atgccgcggg cccatgcggg cgacaggcca
     3301 gccaaggtca tgaatgatag gaataacaaa acggtaaggc g
//
LOCUS       DATAVD010000362         1817 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_591683, whole genome shotgun sequence.
ACCESSION   DATAVD010000362 DATAVD010000000
VERSION     DATAVD010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1817
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_591683"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            196..1185
                     /locus_tag="VHX39_06775"
     CDS             196..1185
                     /locus_tag="VHX39_06775"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HEX3990859.1"
                     /translation="MQSIRLHRFGDPEVMVLEQLPTPSPGPGEILVRVAAAGINFKDT
                     QFRGGLYQGALPVSLGTEGAGVVEAAGTGVDDVKSGDRVCWMYSTGHHPPAHGSYSTH
                     AIVPAASTVPLPSQVDFRQAAAVLFQGITAHHLSHSTYPLEPGEICLVHSAAGGVGNL
                     LCQMAKMRGAMVIATVSSDAKAEVARQSGADHVINYTHQDFAAEVKLITGGTGAHVVY
                     DAVGLRTYLQSLDSLRRRGLLALYGEASGVVPPLDPRLLTSKGSIYLTRTGAQHYIAD
                     RAEFLQRSQAVLGWVAAGDLRVRIHHAYPLAQAADAHRALENRETMGKLLLIP"
     gene            1236..>1817
                     /locus_tag="VHX39_06780"
     CDS             1236..>1817
                     /locus_tag="VHX39_06780"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX3990860.1"
                     /translation="MTNLKNTLIGRIAACALFILAGPALAAAQTYPTHGVTIVVGSQP
                     GGTTDLLARILAKGFSTAWGKPVVVENKVGANNQIAGDFVGRAAPDGYTLWVTPDSFV
                     TNPLLNNKLSHDSFDPISGLARAHHALVASPSFPPNSVPELIAYAKSHSGQISYGTSG
                     LASAGHLSMEYLLSLTGLKFTAVHYKGATPAYND"
BASE COUNT          350 a          585 c          523 g          359 t
ORIGIN      
        1 acagcattgc acccgtcagg cgccagcttg agtgccgatt tcggcacccg accggtcgca
       61 atgcgcggcg cagcgctcag ccacgcgccg tccagataag ttaatccatt gtcttatttt
      121 gacatccgcg gcgtttcttc ggaagatgat tatcgagcag cggcaccggc ccgcatcgcc
      181 gcgaggagac acgaggtgca atcgatccgg ttacatcggt ttggcgatcc ggaagtcatg
      241 gttctggaac agcttccaac gccatctccc ggaccgggtg agattttggt tcgcgtagcc
      301 gccgctggga tcaacttcaa ggacacgcag ttccgtggcg gtttgtatca aggcgcgctt
      361 ccggtctcgc tcggcaccga aggcgcaggc gttgtcgagg ccgccggcac cggcgtcgac
      421 gacgtgaaat ccggtgatcg ggtgtgctgg atgtactcga ccggccatca tccgcccgct
      481 cacggcagct actccacgca tgcgatcgtc cccgcagcca gcaccgtgcc gcttccctcg
      541 caagtcgatt ttcgacaggc cgctgcggtg ctgtttcagg gcatcaccgc acaccacctt
      601 tcccattcga catatccgtt ggaacccggc gagatttgtc tggtgcattc cgccgcgggc
      661 ggcgtcggaa atttgctttg tcaaatggcc aaaatgcgtg gcgctatggt gatcgcgacg
      721 gtttcaagcg atgccaaggc agaagtggcc cgccaaagcg gcgccgatca cgtcatcaac
      781 tatacgcacc aggattttgc cgccgaagtc aaactcatca ccgggggcac cggcgcgcat
      841 gtcgtctatg acgccgttgg actgcgcacg tatctgcaaa gcctggatag tttacgccgc
      901 cgcggcttgc tggcgcttta cggcgaagcg agcggagtcg tgccgccgct cgatccacgc
      961 ctgctgacat ccaaaggatc aatctatctc acgcgcaccg gcgcgcaaca ctacattgcc
     1021 gaccgggcgg aattcctgca gcgctcgcaa gccgtgctgg gttgggtcgc ggccggcgat
     1081 cttcgggtcc gaatccatca cgcctatccg ctggcgcaag ccgccgatgc gcaccgtgcg
     1141 ctcgagaacc gcgagaccat gggaaaactg ctgctgattc cttgatgctg cgccggcatg
     1201 gcacagcact ttactccggg tgggcaccga acgtgatgac gaatctcaag aacacactta
     1261 ttggtcgcat agccgcttgt gccttgttta ttctggcagg ccccgcgttg gccgcggcac
     1321 agacctaccc gacgcatggc gtgacgatcg tcgtcggctc ccagccgggt ggcacgaccg
     1381 atctgctcgc ccgcatcctg gcaaaagggt tcagcacagc ctggggaaaa cccgtggtgg
     1441 tcgaaaacaa agtcggggcg aacaatcaga tcgccggcga tttcgtcggc cgcgcggctc
     1501 cggacggcta caccttgtgg gtgacacccg attcattcgt caccaatccg ctgctcaaca
     1561 acaaactctc ccacgacagt ttcgatccga tctcgggttt ggcacgcgcg catcatgcgc
     1621 tggtggccag cccatccttt ccgccaaatt cggtaccgga attgatcgct tatgcaaaaa
     1681 gccattccgg gcagatcagc tacgggacat ccggcctggc gtccgccggt catctctcga
     1741 tggaatatct tctcagcctg acgggcctca aattcaccgc ggtccactac aaaggtgcga
     1801 cacccgcgta caacgat
//
LOCUS       DATAVD010000363         2940 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2268128, whole genome shotgun sequence.
ACCESSION   DATAVD010000363 DATAVD010000000
VERSION     DATAVD010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2940
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2268128"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..791
                     /locus_tag="VHX39_06785"
     CDS             <1..791
                     /locus_tag="VHX39_06785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase-F iron-sulfur
                     binding region domain-containing protein"
                     /protein_id="HEX3990861.1"
                     /translation="DFDLEVRVGAGAYVCGEETSLLESLEGRRGQVRAKPPLPAHKGL
                     FGQPTVINNVITLASVPVILRDGAEAYQALGFGRSRGTMPIQLAGNVRFGGLFEAGFG
                     LTLGEIVNDIGGGTRSGRPVRAVQVGGPLGAYFPPALFDTKFDYEAFAAKDGLIGHGG
                     VVVFDDTVDLAVQARFAMEFCSIESCGKCTPCRIGSTRGKETLDKIMAGIAVDANLEL
                     IRDLCHTMKFGSLCALGGFIPYPVMSALEHFPEDFRRPRLAPAA"
     gene            806..>2940
                     /gene="fdhF"
                     /locus_tag="VHX39_06790"
     CDS             806..>2940
                     /gene="fdhF"
                     /locus_tag="VHX39_06790"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0015942 - formate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HEX3990862.1"
                     /translation="MSLIQELDHGTKFVPSETMVTLTVDGHSVTVPEGTSIMRASMEA
                     GIKVPKLCATDSLESFGSCRMCLVEIEGRNGTPASCTTPVAPGMKVRTHTDKLRQLRR
                     GVMELYISDHPLDCLTCSANGNCELQDTAGEVGLREVRYGYDGANHLQSPVDASNPYF
                     QFDPSKCIVCSRCVRACEEVQGTFALTVEGRGFASKIAAGMDEPFLTSECVSCGACVQ
                     ACPTATLMEKSVVEMGQPEHSVVTTCAYCGVGCNFKAELRGDQVVRMVPWKDGKANHG
                     HSCVKGRFAWGYANHRDRILNPMLREKITDPWREVSWEEAIGRVASEFKRIQASYGNG
                     AIGVITSSRCTDEEAYLVQKLARATFANNNTDTCARVCHSPTGYGLGATFGTSAGTQD
                     FDSVEDADVILVMGANPTDAHPVFASRMKKRLRDGAKLIVIDPRRIDLVRTPHVEAAW
                     HLPIRPGTNVAILNSLAHVIVTENLVNIDYVRERCELDVFADWAAFVSQPANSPEAME
                     AITGVPAALVRGAARLYATGGNGAIYYGLGVTEHSQGSTAVMGIANLAMATGNLGRRG
                     VGVNPLRGQNNVQGSCDMGSFPHELPGYRHVSEPAVRAIYEKEWGVSLDPEPGLRIPN
                     MLDAAVEGTFRAIYIQGEDIAQSDPDTRHVTAGLSAMECVVVHDLFLNETANYAHVFL
                     PGATFLEKDGTFINAERRINRVRKVIEPRA"
BASE COUNT          536 a          910 c          936 g          558 t
ORIGIN      
        1 acgatttcga tctcgaagtc cgggtcggcg ccggcgccta cgtttgcggc gaggaaacct
       61 cgctgcttga aagcctggag ggccgccgcg gccaggtgcg cgccaagccg cctttgcccg
      121 cgcacaaggg tctgttcgga cagcccacgg tgatcaacaa cgtcatcacc ttggccagcg
      181 tcccggtgat cctgcgcgat ggagccgaag cataccaggc gctcggtttc ggtcggtcgc
      241 gcggaaccat gccgatccaa ctcgccggca atgtccgttt cggcggtctg ttcgaggccg
      301 gtttcggcct gacgctcggg gaaatcgtca acgacattgg cggcggcacg cggtccggcc
      361 ggccggtccg cgcggtacag gttggcgggc ctttgggcgc gtattttccg ccggctttgt
      421 tcgatacgaa gttcgactac gaggcattcg cggcgaaaga cggtctgatc ggccatggcg
      481 gtgtcgtggt gttcgacgac accgtcgatc tcgcggttca ggctcggttc gcgatggagt
      541 tctgctcgat cgagtcctgc ggcaaatgca cgccatgccg catcgggtca acgcgcggca
      601 aggaaacgct ggacaagatc atggcgggca tcgccgtcga tgcgaacctg gaactgatcc
      661 gcgatctttg ccacaccatg aagtttggtt cgctgtgcgc gctgggcggc ttcattccgt
      721 acccggtgat gagcgcgctg gaacattttc cggaagattt tcgccgtcca cggctcgcgc
      781 cggcggcctg aaaggagcgg ttgcgatgtc gctgatccag gaactcgacc acggaacgaa
      841 attcgtgccg tcggagacga tggtgacgct gacggtcgat ggtcattcgg taaccgttcc
      901 ggagggcaca tcgatcatgc gtgcatcgat ggaagccggc atcaaggtgc caaaactttg
      961 cgccaccgat tccttggaga gtttcggcag ttgccggatg tgtctcgtgg agatcgaggg
     1021 ccgcaacggc acgcccgcat cctgcaccac gccagtcgca cccggaatga aagtgcgtac
     1081 gcataccgac aagttgcggc aactgcggcg cggcgtgatg gaattgtata tttccgacca
     1141 tccgctggac tgcctcacgt gctccgccaa cggcaattgc gagctgcagg ataccgccgg
     1201 ggaagtcggc ctgcgcgaag ttcgttacgg atacgacggc gccaatcatt tgcaatcgcc
     1261 ggtcgatgcg tccaatccat atttccagtt cgatccttcg aaatgcatcg tttgctcgcg
     1321 ctgcgtgcgc gcctgcgagg aagtgcaggg cacgtttgct ctcacagtcg aggggcgcgg
     1381 cttcgcatcc aagatcgccg ccggcatgga cgaaccgttc ctcaccagcg aatgcgtgtc
     1441 ctgcggcgcc tgcgtgcagg cctgcccgac cgcgacgctg atggagaaat ccgtggtgga
     1501 gatgggccag ccggagcact cggtcgttac gacctgcgct tactgcggcg tcggttgcaa
     1561 cttcaaggcc gagctgcgcg gcgaccaggt cgtgcgcatg gtgccgtgga aagacggcaa
     1621 ggccaatcac ggacattcct gcgtcaaagg ccgcttcgcc tggggttatg cgaaccaccg
     1681 cgaccgcatt ctcaatccga tgttgcgcga aaaaatcacc gacccctggc gcgaggtcag
     1741 ttgggaggaa gcgatcggcc gcgtcgcctc ggagttcaaa cgcattcagg cgagttatgg
     1801 caatggcgcc atcggcgtca tcacttcgtc gcgctgcact gacgaggaag cctatttggt
     1861 gcagaaactg gcgcgggcga cattcgccaa caacaacacc gacacctgtg cccgcgtctg
     1921 ccactcaccc accggctacg gactgggcgc caccttcggc acctcggccg gcacgcagga
     1981 ttttgattcc gtcgaggatg cggacgtgat tttggtcatg ggtgccaacc cgaccgatgc
     2041 gcatccggtg ttcgcctcgc gcatgaagaa gcgtttacgc gacggtgcga aactgatcgt
     2101 catcgatccg cggcggatcg atctggtgcg cacgccgcat gtcgaggcgg cgtggcatct
     2161 gccgatccgg cccggcacca acgtcgcgat cctcaattct ttggcgcacg tgatcgttac
     2221 cgagaacctg gtgaacatcg attacgtccg cgaacgttgc gagctcgacg tattcgccga
     2281 ttgggctgcg ttcgtctcgc agccggccaa cagtcccgag gcgatggagg caatcaccgg
     2341 cgtgccggcg gctttggtcc gcggtgcggc gcggctttac gccaccggcg gcaatggggc
     2401 gatttattac ggcctcggcg ttaccgagca cagccagggc agcaccgcag tcatgggcat
     2461 cgccaacctt gccatggcca ccggcaatct tggccggcgc ggcgtcggtg tgaacccgtt
     2521 gcgtggacaa aacaacgtcc agggctcctg cgacatgggt agtttcccgc atgaactgcc
     2581 tggctatcgc cacgtctcgg aacctgccgt gcgggcgatc tacgagaagg aatggggcgt
     2641 ttcgctcgac cctgagccgg gcctgcgcat tcccaacatg ctggacgccg cggtggaggg
     2701 caccttccga gccatctaca tccagggcga ggacatcgca caatccgatc ccgacaccag
     2761 acacgtgacc gccggcctgt cggccatgga atgcgtggtg gtgcacgatc tgttcctgaa
     2821 cgaaacggcg aattacgcgc acgtgttttt gcccggcgcc actttcctgg aaaaggacgg
     2881 cacctttatc aatgccgaac gccgcatcaa ccgcgtgcgc aaggtgatcg agccgcgcgc
//
LOCUS       DATAVD010000364         2149 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3011301, whole genome shotgun sequence.
ACCESSION   DATAVD010000364 DATAVD010000000
VERSION     DATAVD010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2149
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3011301"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /locus_tag="VHX39_06795"
     CDS             <1..272
                     /locus_tag="VHX39_06795"
                     /inference="COORDINATES: protein motif:HMM:NF015823.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC-type transport auxiliary lipoprotein family
                     protein"
                     /protein_id="HEX3990863.1"
                     /translation="LGDNRVLAVDDPTSPSGTKTLTLSIRQFIANPNGEVVLDADWTL
                     QGTGTDASPHHATVATKASAKSADAVAQAMSQALARLSDRIARAL"
     gene            718..822
                     /locus_tag="VHX39_06800"
     CDS             718..822
                     /locus_tag="VHX39_06800"
                     /inference="COORDINATES: protein motif:HMM:NF022150.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KGG domain-containing protein"
                     /protein_id="HEX3990864.1"
                     /translation="MGSGKGHDPNNFANSPERAAAAGRKGGHESHKPD"
     gene            1003..>2149
                     /locus_tag="VHX39_06805"
     CDS             1003..>2149
                     /locus_tag="VHX39_06805"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX3990865.1"
                     /translation="MRRGRGVQWMVCFLALATGVPRIAVAQDANHFDPLTDINTSNVS
                     RMKLVFSFRTGQAGGQSDAPAVAGNLLLLQTVFPHKVYALDIHQQAAPVRWSFSPPSD
                     HRAAGLSCCDATVGGPVVANGQIVLDTLDGHTIALDAATGHIRWEVTVASLANGETLA
                     TSPLVAGDRIIIGSAGDDFGARGWVAALDASAGATVWKRFNTGPDDDVGIGAGFNPPY
                     PRDRIHDGGVDTWPPQAWQQGGGGLAGNLAYDPGRGLLLYGTGHPAPWNPEPRPGDDK
                     WTSGLFARDVRTGDARWFVSIDPHDLYALGAAGSVLLADMSWQGQNRALAVHPDANGQ
                     VYVLDRQTGRILSVAPFVQVNATEGVDITADTLRRNVAMDVSPNAITR"
BASE COUNT          420 a          689 c          709 g          331 t
ORIGIN      
        1 gcctgggcga caaccgcgtg ctggcagtcg acgatcccac atcgccgtcc gggaccaaga
       61 cgctgacgct gagtatccgg caattcatcg ccaatccgaa cggagaggtc gtgctggatg
      121 cggactggac actgcaaggc accgggaccg atgcgtcgcc gcatcatgcg accgttgcga
      181 ccaaggcctc cgccaagagc gccgacgcgg tggcgcaggc gatgagccag gccctcgctc
      241 ggctctcgga ccgtatcgcg cgcgccctct gatcttgatc gagcactcta ccatccccgg
      301 accgaccgag cgccaaacgc cggtcggagc gcatcgtctc ggcgagacgc cgagatttcg
      361 tgccgacgga aaagaacatg cggacgaacg atatcgatca agaaccgaac cgggcactgc
      421 tgatcctgcc ggcgatgccg gcggaaccgg catccgccta tgttctgctg gtgtcggacg
      481 aagccagttg catgaggggt gatggattga agtgcggacg ttcaggaagg gcagcgacaa
      541 cgggcaggtt tacggatgta gccgcacgcc gccgcgatcc ggtgaaaccg gctcagcgac
      601 cgcgcgtttg aaacattgct ttcaacagca aaggtacgaa acacgccgac caaaagcgag
      661 cattcaaaga aatccgataa agaggcggcc gggaaaaagg gcgtaacgca ggaccaggtg
      721 ggcagcggca agggccatga cccgaacaac ttcgccaaca gcccggaacg cgctgccgcc
      781 gctggccgca agggaggcca cgagagtcac aaacccgact aaagcctgtg gcgggcagga
      841 gcccgcgtag caggcgcttg gtgaaggact gacacttcgg cgcacggggc cgcaagggaa
      901 ccaagcccgt gcgccagcgt ttcgcatctg cctatcgacg aagccaggcc ggcgagcccg
      961 ccgggttcgc acggagtcca taatgacggg agatccttga cgttgcggcg tggccgcggg
     1021 gttcaatgga tggtctgctt cctcgccctg gctacgggcg tgccgcgaat agccgtggcg
     1081 caggacgcca atcactttga tcccttgacc gacatcaaca ccagcaacgt ctctcgaatg
     1141 aagctggttt tctcattccg cacaggtcag gcgggcggcc agtcagacgc accagcggtc
     1201 gcgggcaacc tgctgctgct tcagacagtg ttcccacaca aggtgtatgc gctcgacatc
     1261 caccagcagg cggcgcccgt ccgctggtcc ttctccccgc catccgacca tcgagccgcg
     1321 ggcttgagtt gttgcgacgc gacggttggc ggaccggtgg tggcaaacgg acagatcgtg
     1381 ctggacacgc tagatggcca cacgatcgcg ctggatgccg cgaccggcca tatccgttgg
     1441 gaggtgacgg tcgccagcct agccaacggt gaaaccctgg ccactagtcc gctggtagcc
     1501 ggcgaccgga tcatcatcgg cagcgcgggc gacgattttg gcgcacgcgg ttgggtggcg
     1561 gcattggatg caagcgccgg cgcgaccgtg tggaagcgct tcaacaccgg tccggatgac
     1621 gacgtcggca tcggcgccgg gttcaatccg ccatacccgc gcgaccggat ccacgacggc
     1681 ggcgtcgaca cctggccgcc gcaggcgtgg cagcagggcg gcggcgggct agccggcaat
     1741 ctggcatatg atcctgggcg aggcctcctg ctgtacggca ccggccaccc ggcaccctgg
     1801 aaccctgaac ctcggccagg tgacgacaaa tggacctccg gcctgtttgc ccgagacgtg
     1861 cggacgggcg acgcgaggtg gtttgtctcg attgacccgc atgacctgta cgcgctgggc
     1921 gccgctggtt ccgtgctgct cgcggacatg tcgtggcaag ggcagaatcg cgccctggcg
     1981 gttcatccgg acgccaatgg acaggtctac gtgctggatc gccagaccgg gaggatcctg
     2041 tccgtcgcgc ccttcgtcca ggtgaatgca accgagggcg ttgatatcac cgccgacacg
     2101 ctgcggcgca acgtcgccat ggatgtcagc ccgaatgcca tcacccgcg
//
LOCUS       DATAVD010000365         1783 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1151230, whole genome shotgun sequence.
ACCESSION   DATAVD010000365 DATAVD010000000
VERSION     DATAVD010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1151230"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..899
                     /locus_tag="VHX39_06810"
     CDS             <1..899
                     /locus_tag="VHX39_06810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990866.1"
                     /translation="NFDLRGSTLGGLDLSGATVGGDLRLGGMTVNGEQIWTKWTVPDG
                     TAPWVALRNAKVGDLQDDEHSWDGTTLVLEGFTYGHLGGVGGVNRQDMRYRKVSSWRD
                     WLDRDSVYSPQPYTQLASVLVASGNSEAASEIRYAGRERQRNELLRGCSWLHPTAPAA
                     TAAPQPPCDLGGWLGLTVLQVTVGYGIGPYTFRALWWTLGLTAAGTAILAFAPGVRGA
                     AYLVDRGRAPRQKSLLWCFGATLNHVLPVVSLNPEFNDFFNDPKRERLYPWQQIAFAV
                     LALSGWALSFFVIAALSGLTQG"
     gene            complement(901..1689)
                     /locus_tag="VHX39_06815"
     CDS             complement(901..1689)
                     /locus_tag="VHX39_06815"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX3990867.1"
                     /translation="MKWVRFTANGHTAYGSLSGDTINEISGEPWGDDAQPNGRHHSLA
                     DVKLEVPVIPKTFYCAGINYATHIREMAEKRGVQPVFPEKADIGYRANNALIAHEEDV
                     VIPAHAPPKMNYEGELVVVIGKQAKHLTEDNAFDCIFGYTIGNDVSERTWQRGDRTFW
                     RGKNTDTFKPMGPWIETDVNLNAMDTVVRVNGREDLRFKTNDMIFGIAHYIAAMTKYM
                     TLYPGDVIWMGTDGTSPDLVHGDVVEVELTGLGVLRNRFVREGQ"
BASE COUNT          304 a          537 c          561 g          381 t
ORIGIN      
        1 gcaatttcga tctgcgcggc agcacgcttg gcggcctgga cctgtccggc gccaccgtcg
       61 gcggcgacct gcgtctgggt ggcatgactg tcaacggcga acagatatgg acgaaatgga
      121 cagttcctga tgggacggcg ccatgggtgg cattgcgcaa cgccaaagtc ggcgatttgc
      181 aggatgacga gcattcctgg gacggaacga cattggtgct cgaaggattt acttacggac
      241 atctgggcgg ggtcggcggc gtgaaccgcc aggatatgcg ttatcgcaaa gtcagttcgt
      301 ggcgtgactg gcttgaccgg gattcagttt acagccccca gccatacacc cagcttgcgt
      361 cggtcctggt ggccagcggc aacagcgagg ctgccagcga aatccgctac gccggccgcg
      421 agcggcagcg caacgaactg ctgcgtggct gcagctggtt gcatcccacc gcgcccgctg
      481 cgacagcggc accgcaaccg ccatgcgatc tgggcggctg gctcggtctg accgtgctgc
      541 aggtgaccgt cggttacggc atcggcccgt acacgttccg tgctctgtgg tggacactgg
      601 gtctgactgc ggcgggtacc gccatcctgg cattcgctcc tggcgtgcgc ggggccgcgt
      661 atctggtcga ccgcggccgg gcgccacggc agaagtcatt gctttggtgc tttggcgcca
      721 cgctgaacca cgtactgccg gtggtttcac ttaacccgga gttcaacgac ttcttcaatg
      781 atccgaaacg cgagcggctt tacccctggc aacagatcgc cttcgccgtt ctcgcactct
      841 ccggatgggc actgagcttc ttcgtgatcg ccgcgctgtc ggggctaaca caagggtaag
      901 ttattgtccc tcgcggacga accggttgcg caacacgccg agcccggtca gctccacctc
      961 gacaacatcg ccatgcacca ggtccggtga ggtcccgtcg gtccccatcc agatcacatc
     1021 gcccggatac agcgtcatgt atttcgtcat cgcggcgata taatgcgcga tgccaaagat
     1081 catgtcgttg gtcttgaagc gcaggtcttc gcggccattg acccgcacga cagtgtccat
     1141 cgcattgagg ttcacgtcgg tctcgatcca tggccccatt ggcttgaacg tgtcggtatt
     1201 cttgccgcgc cagaaggtgc ggtcgccacg ttgccaggtg cgctcgctga catcgttgcc
     1261 gatggtgtag ccgaatatgc aatcgaacgc gttgtcctcg gtcagatgct ttgcctgttt
     1321 gccgatcacc acgacaagtt cgccctcata gttcattttg ggcggagcgt gcgccgggat
     1381 gacgacgtct tcctcgtgcg cgatcagtgc gttgttggca cggtagccaa tgtcggcctt
     1441 ttcgggaaac accggttgga caccacgctt ttccgccatc tcgcggatgt gcgtggcata
     1501 gttgatgccg gcgcaataga atgttttcgg gatcaccggg acttccaact tcacgtcggc
     1561 caggctgtgg tgccggccgt tgggttgcgc atcgtcgccc cacggctcgc cggagatttc
     1621 gttaatcgtg tcgccggata acgatccgta agcggtgtga ccgttggcgg tgaacctgac
     1681 ccatttcatg acacggtctc ctgtgcggcg gcgcgggcga gttgttggaa cgccggatcg
     1741 aagattttcg tcgccatgac ctggcagcgg cggatcaggc gga
//
LOCUS       DATAVD010000366         3842 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2826302, whole genome shotgun sequence.
ACCESSION   DATAVD010000366 DATAVD010000000
VERSION     DATAVD010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3842
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2826302"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1149)
                     /locus_tag="VHX39_06820"
     CDS             complement(<1..1149)
                     /locus_tag="VHX39_06820"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEX3990868.1"
                     /translation="MTSIDYAKLYSEGLPDPAPKWAPFPPYYFVGGNNDPEQIPIEGL
                     VEAAASVLRREGSKLAIYNLGLGPQGYPGLRQFVADRCKRHRGMDMPIDDVMIVTGSG
                     QGIDMISKLLVNPGDTVLCEEFCYQGAMNRFRKIGAKIEAMKLDADGIVIDALEAQLA
                     ALKARGITPKFIYTIPTIQNPTASILPLDRRHALIKLAREYNVAIFEDECYADLLWEG
                     VEAPPALYALDPGCVIHLGSFSKSLAPALRLGYVVAEWEIMRRLLPLKGDSGTGALDQ
                     MVVAEYFSRNFDRHLNHLNGVLHDKLNTMVEAVEREFGAAAECWHPKGGIFLWIKLPE
                     TVDVRKLLKPAAAAGIIFNEGPAWAVSPDNSSSHLRLCFAMPSKQTIRD"
     gene            complement(1259..2263)
                     /locus_tag="VHX39_06825"
     CDS             complement(1259..2263)
                     /locus_tag="VHX39_06825"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX3990869.1"
                     /translation="MRAAVFLGPGQPLSIEDRQTPVARLGDIVLQVAYCGICGSDLHA
                     TEPGPTALETGTVLGHEFSGVVTESASAAFQAGDRVIGLPLQECDECRPSGQGCRDRL
                     GILCPRNRIIGLSAASPGGYAEYLRMPAHHALKIPDGLDFRLAALTEPLAVGAHAVRA
                     AGNLLGARVLIIGAGPIGLAVALLAQLAGAREVVVSEIAAGRRAKAASLGARVVDPVT
                     DKPDPAEIIFECVGVPGLLRQCIELAPLHGRIVVVGVCRAEDRIFPRVALRKELGIQF
                     VLGYTADEFALVLDLLASGRIDAAPLITAVIGLHQTPAMFEALRQPGDHAKVLIDPRL
                     "
     gene            complement(2265..3050)
                     /locus_tag="VHX39_06830"
     CDS             complement(2265..3050)
                     /locus_tag="VHX39_06830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3990870.1"
                     /translation="MISGARTPLTVDLGGFRVAISAGANGIGKVIADSFAACGASVFV
                     SDIDERALASCGHPGVRADAGDPADCEAFVDAAVGHLGGLDVLVNNAGIAGPTALVEH
                     VTPAELDATLRIDLAAMFHCSRRAIPALRANGGGAVINLSSAAGRFGFPLRAPYSAAK
                     WGVIGFTKSLSIELGPDGIRVNAILPGPVDGPRIRAVIKAKAEVEKVSENEMTERMVS
                     TTSLKSFVTQQDIANMALYLASPFGTTISGQAISVDADMQSTV"
     gene            complement(3047..3340)
                     /locus_tag="VHX39_06835"
     CDS             complement(3047..3340)
                     /locus_tag="VHX39_06835"
                     /inference="COORDINATES: protein motif:HMM:NF020317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYD domain-containing protein"
                     /protein_id="HEX3990871.1"
                     /translation="MPTYVMLANWTDQGVRTVDDGPKRVDIARKSLEDMGGRFLSVYM
                     TMGIHDMIITYDAPDDAVAARFTLLLGKQGNVRTQSLKAFPEEAYRQIVNSLR"
     gene            3399..>3842
                     /locus_tag="VHX39_06840"
     CDS             3399..>3842
                     /locus_tag="VHX39_06840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990872.1"
                     /translation="MMNDEGKRNIEFVGYTDQGGKGDGVQVMVAGGYAYVGTRVQRGI
                     MVTDVRDPRNPKPVNLVATHPKSVSMHLQAADGLLLHIQEADQRAILSAQEYYGGSGR
                     VDSSRFGKRGEDYAAGITIYDLKDPVNPRKIGFLEVEGLGCHRIWY"
BASE COUNT          732 a         1204 c         1213 g          693 t
ORIGIN      
        1 gtcccggatc gtctgcttgc tcggcatggc gaagcatagc cgcaggtgcg aactggagtt
       61 atctgggctg accgcccagg ccggcccttc gttgaagatg atgccggccg cggcggcggg
      121 tttcagcagt ttccgcacgt ccaccgtttc aggcaatttg atccacagga agatgccgcc
      181 tttcggatgc cagcactcgg cggcagcgcc aaactcgcgt tccacagcct cgaccatggt
      241 gttcagtttg tcgtgcagca caccgttcag gtggttcaaa tgccggtcga agttcctgga
      301 aaaatactcc gccacgacca tttgatcgag cgcacctgtg ccgctgtcgc ccttcaacgg
      361 caacagccga cgcatgatct cccactccgc gacgacgtag ccaagccgca acgccggggc
      421 cagcgatttg gaaaacgatc cgagatggat cacgcagccg ggatcgagcg cgtacagcgc
      481 gggtggcgcc tcgacacctt cccacagcag gtcggcgtaa cactcgtcct caaagatcgc
      541 gacgttgtat tcgcgcgcca gcttgatcaa cgcatgccgg cggtcgaggg gcaaaatgct
      601 ggcggtcggg ttctggatgg tggggatcgt gtagatgaat ttcggtgtga tgccgcgcgc
      661 ctttaacgcg gccaactgag cttccagcgc atcgatgacg atgccgtcgg catccagttt
      721 catggcctcg attttcgcac cgattttgcg aaaccggttc atcgcgccct ggtaacagaa
      781 ctcctcgcac agcacggtat cgccgggatt gaccagcagc ttgctgatca tgtcgatgcc
      841 ctggcccgag ccggtgacaa tcatcacatc atcgatcggc atatccatgc ctcggtgacg
      901 cttgcagcga tcggcgacga attggcgcag cccaggatag ccttgcgggc ccaagcccag
      961 attgtagatg gcgagtttcg acccctcgcg ccgcagcacg gaggcggccg cttcgaccag
     1021 gccctcgatc gggatttgtt ccggatcgtt gttaccgcca acgaaataat acggcgggaa
     1081 cggcgcccat ttcggcgccg gatccggcag tccctcgctg tagagtttag catagtcgat
     1141 cgatgtcatt ggggtgtccc gttgctggcc gcctcatccg cctggcagga ttgggtcttg
     1201 ccgccgggat gtcaaatcac cgtggcaaat taccgccggg caaatcacag cgatcaagtc
     1261 atagccgggg atcgatcagc accttggcat ggtcgccagg ttggcgcagc gcctcgaaca
     1321 tcgcgggtgt ctggtgcaga ccgatgaccg cggtgatcag cggcgcggca tcgatccggc
     1381 cgctcgccag caggtccagc accaatgcga attcatcggc ggtatagccc agtacgaact
     1441 ggataccgag ttccttgcgc agtgcgacac ggggaaagat ccgatcctcg gcccggcaga
     1501 cgccgacgac gacgatgcgg ccgtgtaacg gtgcgagctc gatacactgg cgcagcaacc
     1561 ccggtactcc gacgcattcg aagatgatct cagccggatc aggtttgtct gtcaccggat
     1621 cgacgacgcg ggcgccaagc gaggcagcct tggcccgccg tccggcagcg atctcgctga
     1681 ccacgacctc gcgcgcgccg gccagttgcg ccagcagtgc cacggcgagg ccgatcgggc
     1741 ccgctccgat gatcagcacg cgcgcaccca gcagattgcc cgccgcgcgg accgcatggg
     1801 caccgaccgc cagcggttcg gtcaaggctg ccagccggaa gtccaggcca tcggggattt
     1861 tcaaggcgtg atgcgcgggc atccgcagat actccgcgta gcctccgggt gaggcagccg
     1921 acaggccgat gatccggttg cgcggacaca gaatgcccaa ccggtcgcgg caaccctgac
     1981 cggacggccg gcattcgtca cactcctgca acggcaagcc gatcacccgg tcgccggcct
     2041 ggaacgcggc cgaggccgac tcggtcacca cgccggaaaa ttcgtggccg agcactgtgc
     2101 cggtttccaa cgctgtcggt ccgggctcgg tcgcgtgcag atcggagccg cagatgccgc
     2161 aataagccac ctgcagcacg atatcgccca accgcgccac cggggtttgc cggtcttcga
     2221 tcgacagtgg ctggcccggt ccaagaaaca cggcagcgcg catgtcacac ggtgctttgc
     2281 atgtcggcat cgacgctgat ggcctgaccg ctgatcgtgg taccgaacgg gctggccaga
     2341 tacagcgcca tgttggcaat gtcctgttgc gtaacgaaac tttttagcga cgtggtagag
     2401 accatccgtt cggtcatttc attctcggaa actttctcca cttccgcctt cgccttgatc
     2461 acggcacgaa tgcgcggccc atccaccggc ccgggcagga tcgcgttgac ccgaatgccg
     2521 tccgggccga gttcgatgga gagcgatttg gtgaacccga tgactcccca tttcgctgcc
     2581 gaatagggcg cacgcagcgg aaaaccaaag cggccggcag ccgaactcag attgatgact
     2641 gcgccaccgc cgtttgctcg cagtgccggg atggcgcggc gcgaacaatg gaacatcgcg
     2701 gcgaggtcga tacgcaatgt ggcgtccagt tcggcgggcg tcacgtgctc caccagtgcc
     2761 gtgggcccgg cgatgccggc gttgttgacc agcacgtcga ggccgcccag atgaccgacg
     2821 gcggcatcga cgaaggcttc gcagtcagcg ggatcgccgg cgtcggcacg caccccggga
     2881 tgcccgcagg aggccagcgc ccgttcgtcg atgtccgaaa cgaaaaccga ggcgccacat
     2941 gcggcaaaac tgtcggcgat cactttgccg atgccgttcg caccggcgga gatcgccact
     3001 cggaagccgc ccagatcgac ggtcagaggg gtgcgcgcgc cgctgatcat cgcaggctgt
     3061 tcacaatctg acgataggct tcctcgggga acgctttcag cgattgggtg cgcacattgc
     3121 cctgcttgcc cagaagcaaa gtgaagcgcg ccgcgaccgc gtcgtccggc gcgtcatagg
     3181 tgatgatcat gtcgtggatg cccatggtca tgtagaccga gaggaacctc ccgcccatgt
     3241 cctccagaga cttccgtgcg atatcaacac gtttcggccc gtcgtcgact gtgcggacac
     3301 cttgatcggt ccagttcgcc agcatgacat acgttggcat ggtcgcttcc ttcccaggag
     3361 gaagctatac tgtgcctctg gcgcaggggg aggcaagcgt gatgaatgac gagggcaaac
     3421 ggaacatcga attcgtcggc tacaccgatc agggcgggaa gggcgacggt gtgcaggtga
     3481 tggtcgccgg tggctacgcc tatgtcggca cgcgggtgca acgcgggatc atggtgaccg
     3541 acgtgcgcga ccctcgaaat ccgaagccgg tcaatcttgt ggcgacgcat ccgaagtcgg
     3601 tgtccatgca tttgcaggct gccgatggcc tgctgctgca tatccaggag gcggaccagc
     3661 gggccatcct gtcagcccag gagtattatg gcggatcggg gagggtggac agcagccggt
     3721 ttggtaagcg cggcgaggac tatgccgccg gcataacgat ttatgacctc aaggacccgg
     3781 taaaccctcg caagatcggc tttctggagg tcgagggtct cggctgccat cgcatttggt
     3841 at
//
LOCUS       DATAVD010000367         4968 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_220326, whole genome shotgun sequence.
ACCESSION   DATAVD010000367 DATAVD010000000
VERSION     DATAVD010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4968
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220326"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1133)
                     /locus_tag="VHX39_06845"
     CDS             complement(<1..1133)
                     /locus_tag="VHX39_06845"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3990873.1"
                     /translation="MAEQLDYDVIVVGAGISGLYQLYRLRQLGLSVRVLEAGTGVGGT
                     WYWNRYPGARFDSESYSYSYSFSDELLAEWDWSEHFAAQPETLRYLNHVADKFDLRRD
                     IQFRSRVASAHFQDAANVWDVTLEDGGRLRCRFLVTAIGPLSAPTMPTIPGVGDFLGE
                     SFHTARWPHEPVSFAGKRVAVIGTGATGVQTIQEVAKTAGSLTVFQRTPNWCAPLLNG
                     KIDAAEMATIRAGYPEMFQRCRETFACFIHTVDPRGTFEVSDEEREATYERLYASPGF
                     GIWQGNFRDMLTDRKANALISEFVARKIRQRVKNQAVAEKLIPKNHGFGTRRVPMETK
                     YYEVYNQDNVTLVDILETPIERSTPAGVRTSQAEHEFDIIIFAT"
     gene            1326..2162
                     /locus_tag="VHX39_06850"
     CDS             1326..2162
                     /locus_tag="VHX39_06850"
                     /inference="COORDINATES: protein motif:HMM:NF013757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator C-terminal
                     domain-containing protein"
                     /protein_id="HEX3990874.1"
                     /translation="MDNISPPEHGRAAGETSITRVLGILDLFTPETPVWTVDLLVDRL
                     LLGRATIYRYVRALCDAGFLVPVAGAGYVLGPRFIEFDRSIRLADPLLHIVPPVMAEL
                     RDVVNGGQLLCAFYGLRVLTVLQDKTDPNITMSMERGRPFSLFRGSPSRVILANLPTY
                     QLRNLALNHQQDIAEAGLGQNWTEFRDAMRTIRRNGYLVASDIDKALVGISAPIFHAP
                     GAVAASLCLVRTKQNVSPEDATFLGRLAVDACRRISSELQAFRPGDADFGAPAFPISR
                     VR"
     gene            complement(2170..3006)
                     /locus_tag="VHX39_06855"
     CDS             complement(2170..3006)
                     /locus_tag="VHX39_06855"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX3990875.1"
                     /translation="MRTVAIAVAAAVLVIWTVLPFVWILLTSLKNPGDIISVPPKFVF
                     KPTVSNYVALVLGNHRGNYASARPDFPLFFLNSVIVSTGAVALSVLASIPAAYALARF
                     TFPLKGALGFIFMSFRFVPFLAFVIPLYLLYQRVGLYNTHIGLILAYQLITLPFTIWM
                     LRSFFMEIPLEIQEAAQIDGCSWLGTLTRVILPLSMPGIAVTVILGFMFCWNAFNYPL
                     MLAGRETFPVTVGAIQFISYEQVLWGQMAAATIVSALPQLVLSLMVQKYIVRGLTMGA
                     VR"
     gene            complement(3042..3947)
                     /locus_tag="VHX39_06860"
     CDS             complement(3042..3947)
                     /locus_tag="VHX39_06860"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX3990876.1"
                     /translation="MATVSVRRRRRRGRFLPYLLLAPALILLVGMVYPFGLGLYYSLN
                     DYWLQFPKRFHFIGLGNYVNLFGKPLFARAVEFTLGYTLVAVTIQVGLGLAVALFLHA
                     RVPGRKTMRAMMLMPLMIPPVIAALMWKVMMDSTRAGILNYLLSFIGVDPVNWLGSPH
                     AAIVSVLIIDTWGNLPFVSLILLGGLQALPTEPYEAARVDGAGPAAMLRYITLPLLRP
                     FIILAATFRVMDSLRIFDVIYATTMGGPDDATTNLSIMSYQYAFQWYQMGMAVAETIV
                     LLAMVVIASYVLLRMWNRSAESAAQ"
     gene            complement(3952..>4968)
                     /locus_tag="VHX39_06865"
     CDS             complement(3952..>4968)
                     /locus_tag="VHX39_06865"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3990877.1"
                     /translation="DPKLTDPSWYKMEDFYPALIEANRWDGKIGGGVGKGSLYSIPVM
                     EESYILAYRKDIFDRYHIDVPTTYEGMAEAARQVKKNAGIAGIVARGTPSIASLGTGF
                     ISGLKSYTNNQWSELNAKMKADFDDPRSVKYTEMWVDMIRESGPPNWADMQWYDAMDA
                     FTAGQAGMIADCDFFAAGYEDPSKSKIAGKVGYAMLPPGSDGKTYSGLWTWALGINKA
                     AKSKEAAWLFVQWATSQHTLLEATVSYRNYNPSRASITKDPRVQKTVGAWGDGSYVKT
                     VEKNLETAQVAWVPEPLRVRLGNIWARALQAIYFRRMSAADALKNASKECDQVFQEVG
                     LSGQ"
BASE COUNT         1033 a         1732 c         1333 g          870 t
ORIGIN      
        1 gtggcaaaaa tgatgatatc gaattcgtgc tcggcctgac tggtcctgac ccccgccggc
       61 gtactccgct cgatcggggt ctccagtata tccaccagcg tcacattatc ctgattgtag
      121 acctcgtaat acttcgtctc catcggcacg cgccgtgtcc cgaacccgtg gttcttcggg
      181 atcagcttct ccgccaccgc ctggttcttc acccgctgcc ggatcttccg cgccacaaac
      241 tccgaaatca gcgcgttcgc tttccggtcc gtcagcatgt cacggaaatt gccctgccag
      301 ataccgaacc cgggcgaggc atacagccgc tcatacgtcg cctcccgctc ctcgtccgag
      361 acctcgaacg tcccccgagg atcgacggta tggataaaac acgcaaacgt ctcccggcac
      421 cgctggaaca tctcgggata accggcgcga atcgtcgcca tctccgccgc atcgatcttc
      481 ccgttcagca gcggcgcgca ccagttcggc gtgcgctgga acaccgtcag cgacccggcg
      541 gtcttggcga cttcctggat cgtctgcacc ccggtggcac cggtgccgat caccgccacc
      601 cgcttgcccg cgaaactgac cggctcatgc ggccagcgcg ccgtgtggaa cgactcgccc
      661 aggaaatcac caacccccgg gatcgtcggc atcgtcggcg ccgacaacgg cccgatcgcg
      721 gtgaccagga agcggcagcg caaccgcccc ccatcttcca gcgtcacatc ccagacattc
      781 gcggcatcct ggaaatgcgc cgacgccacc cggctgcgga actggatatc ccgccgcaga
      841 tcgaacttgt cggcgacatg gttcaaatac cgcaacgtct ccggctgcgc cgcgaaatgt
      901 tccgaccaat cccattccgc cagcaattcg tccgagaacg agtaactgta ggaatagctc
      961 tccgaatcga aacgagcccc cggataccgg ttccagtacc aggtgccgcc aacaccggtg
     1021 ccggcctcca gcacacgcac cgacaaccca agttgccgca accgataaag ctggtacagc
     1081 ccggaaatac ccgcgccaac gacaatcaca tcgtagtcca gttgctcggc cacgtcttaa
     1141 cactcccaat tcagaggcgc ggttcatgcg cagccttctg ttgcattcag ttggaatggt
     1201 gaaaatcctc ataatgagag atttttcccc agtcaacggg aatcccgcac tcggctggaa
     1261 tttttctatt tctcacattc cgggaatcac gctaaaccca ccccaacgtc gcgaggtcat
     1321 ggcaaatgga caacatcagc ccccccgaac acggccgagc ggcgggtgaa accagcatca
     1381 cccgcgtcct cggcatcctg gacctgttca cgccggaaac cccggtctgg accgtcgacc
     1441 tgctcgttga ccgcctcctg ctcggccgag ccaccatcta tcgctacgtg cgcgccctgt
     1501 gcgacgccgg cttcctggtg cccgtggccg gcgccggcta cgtcctgggt ccccgcttca
     1561 tcgaattcga ccgcagcatc cgcctcgccg acccgctgct gcacatcgtg cccccggtga
     1621 tggccgagct gcgggatgtg gtgaacggcg gccagctcct ctgcgccttc tacggcctgc
     1681 gcgtgctgac cgtgctgcag gacaagaccg accccaacat caccatgagc atggaacgcg
     1741 gccgcccgtt ctccctgttc cgcgggtcgc catcccgggt gatcctggca aatctcccca
     1801 cctaccagtt gcgcaacctc gccctgaacc accagcagga catcgccgag gccggcctgg
     1861 gccagaactg gaccgaattc cgtgacgcca tgcgaaccat ccgccgcaac ggctacctgg
     1921 tggcgagcga catcgacaag gcgttggtcg gcatttctgc cccgattttc cacgcccccg
     1981 gcgcggtcgc cgccagcctg tgcctggtgc gcaccaagca gaacgtctca cccgaggacg
     2041 ccactttcct cggccgcctc gcggtagacg cctgccgccg catctccagc gaactccagg
     2101 cgttccgccc gggcgacgcc gatttcggtg cgccggcgtt tccgatttcc cgagtgcggt
     2161 aggtgcgaat caccgcaccg cccccatggt aagcccccgc acgatgtatt tctgaaccat
     2221 caggctcagc accagttgcg gcagtgccga aacgatcgtc gcggcggcca tttgccccca
     2281 tagcacctgt tcataggaaa tgaactggat cgccccgacc gtgaccggaa acgtctcccg
     2341 ccccgccagc atcagcggat agttgaacgc attccaacag aacatgaacc ccaatatgac
     2401 cgtgaccgcg atacccggca tgctcagcgg cagtatgacg cgggtcaaag tacccagcca
     2461 cgaacatccg tcgatctgtg cggcctcctg gatttccaac ggtatctcca tgaagaagct
     2521 gcgcagcatc cagatcgtaa acggcagcgt aataagctga tacgcgagga tcagcccgat
     2581 atgggtattg tacagcccca cacgctggta gagcagatac agcggaatca cgaacgccag
     2641 gaacggcacg aaccggaaac tcatgaaaat gaagcccagc gcccccttca gcggaaaggt
     2701 gaaccgcgcc agcgcatagg ccgcagggat gctcgccagg actgaaagcg cgaccgcacc
     2761 cgtggaaacg atcacgctat tcagaaaaaa taacggaaaa tccgggcgcg cggacgcgta
     2821 gtttccacga tgattcccaa gcaccagcgc cacgtagttg ctgaccgtcg gcttgaagac
     2881 gaacttcggc ggcacggaga tgatgtcccc cggatttttc agcgacgtca gcaggatcca
     2941 gacgaacggc agcaccgtcc agatgaccag cacggccgcg gccaccgcga tggcgacagt
     3001 ccgcacatgg tgccgccgcc ggcgcctctg cgacccgccc ctcattgcgc cgcgctctcg
     3061 gccgaccggt tccacatacg caacaacaca tagctggcga tcaccaccat cgccagcagc
     3121 acgatcgttt cggccacggc catgcccatc tgataccact ggaacgcata ctgatacgac
     3181 atgatggaga ggttggtggt cgcatcatcc ggcccgccca tcgtcgtcgc gtagatcacg
     3241 tcgaaaatcc gcagcgaatc catcacccgg aaggtcgcgg caaggatgat gaacggccgc
     3301 aacagcggca gcgtgatata gcgcagcatg gcggcgggac cggcaccgtc aaccctggcc
     3361 gcctcgtacg gttcggtagg cagcgcctgc aacccgccaa gcaggatcag tgaaacgaat
     3421 ggcaggttgc cccacgtatc gatgataagc accgaaacga tcgccgcgtg cggggaaccc
     3481 agccagttga ccggatcgac tccgatgaac gacagcaggt aattgaggat gcccgcccga
     3541 gtcgaatcca tcatcacctt ccacatcagc gcggcgatca ccggcgggat catcaacggc
     3601 atcagcatca tggcgcgcat cgttttgcgc ccggggacac gcgcatgcag aaacagcgcc
     3661 accgcgagtc ccagcccaac ctggatcgtg accgcaacca gcgtatagcc cagtgtgaac
     3721 tcgaccgctc gggcgaacag cggcttgccg aacagattga cgtagttgcc aagcccgatg
     3781 aaatggaatc gcttaggaaa ctgcaaccaa tagtcgttca gactgtaata caggccgagg
     3841 ccgaacggat acaccatccc caccagcaga atcagcgccg gcgcaagcag caggtacggc
     3901 agaaacctgc cacgccgcct gcgccggcgg acggacactg tcgccaccgt gctattgccc
     3961 cgacagcccg acctcctgga acacctgatc gcattccttg ctggcatttt tcagggcatc
     4021 ggcggccgac atgcggcgga agtagatcgc ctgcaacgcc cgagcccaga tgttgcccag
     4081 ccgcacccgc aacggttcgg gaacccaggc cacctgcgcc gtctccagat tcttctcgac
     4141 cgtcttcaca taactgccgt cgccccaggc cccgacagtc ttctgaaccc gcgggtcctt
     4201 ggtgatcgat gcgcgtgacg gattgtagtt gcgatagctg acggtcgctt ccagcagagt
     4261 atgctgcgag gtcgcccact gcacgaaaag ccaggccgct tctttgctct tggccgcctt
     4321 gttgatgccc agcgcccagg tccacaggcc ggaataggtc ttaccgtcgg aaccaggcgg
     4381 cagcatcgca taacccacct tgccggcgat cttcgacttg ctcggatcct cgtacccggc
     4441 ggcaaagaaa tcgcagtcgg cgatcatccc agcctgaccc gcggtgaacg cgtccatcgc
     4501 atcgtaccat tgcatatccg cccagttcgg cggcccgctc tcacggatca tgtcgaccca
     4561 catctcggtg tatttgaccg aacgcggatc gtcgaaatcc gccttcatct tggcattcaa
     4621 ctcgctccac tgattgttcg tgtacgattt gagtccgctg ataaagccgg tgcccaggct
     4681 cgcgatgctc ggcgtgccac gtgccacgat cccggcgatt ccggcattct tcttcacctg
     4741 ccgagccgcc tcggccatgc cttcataggt cgtcggcacg tcgatatgat agcgatcgaa
     4801 gatgtccttg cggtatgcga gaatatagct ctcctccatc accggaatcg aatacagcga
     4861 acccttgccg acaccgccgc cgatcttgcc gtcccaccgg ttggcctcga tcagcgccgg
     4921 atagaaatcc tccatcttat accagctcgg gtcagtcaat ttcggatc
//
LOCUS       DATAVD010000368         3709 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_965890, whole genome shotgun sequence.
ACCESSION   DATAVD010000368 DATAVD010000000
VERSION     DATAVD010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3709
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_965890"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1389
                     /locus_tag="VHX39_06870"
     CDS             <1..1389
                     /locus_tag="VHX39_06870"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3990878.1"
                     /translation="ISTLIGRLISRPILTMNKAMRRLADGDLELEIPAVDRADEVGQM
                     AQTLLVFRSNALETRSLQAAADKEHAAKDHRQAAMDRCTSDFGTTTAGVLSGLVRSAE
                     TMRSTAAEMSEAAQRTRVDASNTAEGAEQSARNLETVAAAAEQMSASIAEIGQQVARA
                     TQAAQEAVERTSATDAKVSDMAAAADRVGHVVQLINAIAAQTNLLALNATIEAARAGD
                     AGKGFAVVAGEVKALAAQTAKATEEIGRNIGEIHAATAQAVNAVREVGVSIGQVEHVA
                     AAIAAAVEEQSAVTQGIVSSVQTVSVATQDATRAMHAVSQAAEVTNTASRTVLAGADD
                     VSANAARMRDEVSQFLRAMANTSDEERRLYQRIPGNGTFVRLRTSGGELRASVQDISR
                     GGLALSCNWHSEPGAEVMAVLPGTETAVATRVVRAGGGHLALAFLQDATTLALVDQAL
                     RHIGQSATRAAA"
     gene            1532..2473
                     /locus_tag="VHX39_06875"
     CDS             1532..2473
                     /locus_tag="VHX39_06875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3990879.1"
                     /translation="MHLGNRIAQIIPTLLLVSIMVFGLQQLMPGDPAMVLAGEERGDP
                     QVLAQIRAELWLDRSLPVQYLHWMNNVVHGDLGYSWRIRQPVLTLIETRLPVTLQLSV
                     MAFAFALAIGVPAGIVAAVQRNRFRDYLANAIGLAGLSTPTFWLGIMLILLVSVDLGW
                     LPPSGYVPLTEDWRQSLATTIMPAFVLGNAIAAILMRHTRAAMLTALDQDYVRTARAK
                     GLAESRVVLRHALRNALIPVVTLGALELGTLLSGAVLTEQVFSIPGFGKMIVDAVFNR
                     DYPVVQGVVLVTAFLYVVLNLLADILYVVINLRLRGS"
     gene            2470..3234
                     /locus_tag="VHX39_06880"
     CDS             2470..3234
                     /locus_tag="VHX39_06880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3990880.1"
                     /translation="MTDPFYRIAPALFGVLALVLWEAAVRLFDVPVYLVPGPLAVLAA
                     FMQDPVGLLLSLAATLAVTFAALVASAVLGAAMAIAMSTNRLAQAAIQPWAVILQVTP
                     IVAIAPLIIVWVGNPFASLVVCAMIVAFFPVFANTATGLASAPPELSDLFRLYGGSRW
                     RTLTLLQLPASLPYFLSGLRISGGLALVGAVVAEFVAGSGGFASGLAYRILEAGYRLQ
                     IPRMFAALFLLSLAGIAINFGLGLFGRLILQTRGGV"
     gene            3231..>3709
                     /locus_tag="VHX39_06885"
     CDS             3231..>3709
                     /locus_tag="VHX39_06885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3990881.1"
                     /translation="MNTLLIFGLGYCGRAVADAATDFNVMATSRSIDAPDRAMAVESG
                     SSVGRVESSQLTRIPFAAAEPAIVAATHVLVTVPPDADGDPVLNRYSDAIAAAPMLRW
                     IGYLSSTVVYGDQGGAWVDEATPPSPSQPRGQRRLEAERAWSRFSSRYAVDLFRLAG"
BASE COUNT          604 a         1160 c         1229 g          716 t
ORIGIN      
        1 atttcaacgc tgatcggcag gctgatctcg cggccgatcc tgaccatgaa caaggcgatg
       61 cgccgcctgg cagacggcga cctcgagctc gaaatcccag ccgtggatcg tgccgacgaa
      121 gtcggacaga tggcacagac gctgctggtg ttccgttcga atgccctgga gacgcgttca
      181 ctgcaggccg ctgccgataa agaacatgcc gccaaggacc accggcaggc ggcgatggat
      241 cgttgcacca gcgacttcgg taccaccacc gcgggcgtcc tgagcggact ggtccggtcg
      301 gcggagacca tgcgctcgac cgcggccgaa atgtcggagg ctgcccaacg tacccgcgtc
      361 gatgcgagca acactgccga gggtgccgag caatcggctc gcaacctcga aaccgtggcc
      421 gccgctgccg aacaaatgtc ggccagcatc gcagaaatcg gccagcaggt tgcccgcgcc
      481 actcaggcgg ctcaggaggc ggtcgagcga acgtcggcaa ccgacgcgaa ggtcagcgat
      541 atggcagcag cggcggaccg ggtcggtcac gtggtgcagt tgatcaatgc catcgccgca
      601 cagaccaacc tgctggcgct gaatgcaacg attgaggcgg cacgcgccgg tgatgcgggc
      661 aaggggttcg ccgtggtcgc cggagaggtg aaagctctgg ctgcgcagac ggcaaaggcc
      721 accgaagaaa tcggccgcaa cattggggaa atccacgctg ccactgccca ggcggtgaac
      781 gctgtccgcg aggtgggagt atcgatcggt caggtcgagc acgtcgccgc cgccatcgct
      841 gccgcggtgg aggagcagtc cgcggtaacc cagggcattg tgtccagcgt gcaaacggtc
      901 agcgttgcga cacaggacgc gacacgggca atgcacgccg tatcacaagc ggccgaggtc
      961 acgaacaccg cgagccgcac cgtgttggcc ggtgccgatg acgtcagcgc caacgctgcc
     1021 agaatgcggg atgaggtcag ccagttcctg cgtgccatgg ccaacaccag tgacgaggag
     1081 cgccggttgt accaacgcat tccgggcaac gggacgttcg tgcgattgcg gacctcgggc
     1141 ggggaactgc gcgcgtcggt ccaggacatc tcgcgcggtg gactggcatt gagttgcaac
     1201 tggcacagcg agccgggcgc ggaggttatg gcggtattgc ccggtacgga aacagccgtc
     1261 gcaacgcggg ttgtcagagc aggcggcggg cacctcgcgc tcgcgttcct ccaggatgcc
     1321 acgactctgg cgctggtcga tcaggcattg cggcacatcg gccagtcagc gacgcgcgcg
     1381 gccgcctgac acggcattcc gcggttggcc tgatgttctg cgccagcaaa cgcctgacct
     1441 gctcctcgcg gccaggccaa cgatcggcct gcctttgaca acccgctcgc cgacgccatg
     1501 atccggcggc aatccaggcg acgtacccca gatgcatctc ggcaaccgga tcgcgcagat
     1561 catcccgacg ctactgctgg tcagcatcat ggtgttcggc ctgcaacaac tcatgcccgg
     1621 cgatcccgcc atggtactgg ccggagagga acgcggcgat cctcaggtgc tggcgcagat
     1681 ccgtgccgaa ctgtggctcg accggtcgtt gccggtgcaa tatttgcact ggatgaataa
     1741 cgttgtgcac ggcgatctcg gctattcctg gcgcatccgc cagccggtac tgaccctgat
     1801 cgagaccagg ctgccggtga ccctgcaact gtcggtgatg gcattcgcct tcgcgctggc
     1861 gatcggcgta ccggccggga tcgtcgcagc ggtgcaacgc aaccggttcc gggactatct
     1921 cgccaacgca ataggcctcg ccggtttgtc cacgccgacc ttctggctcg gcatcatgtt
     1981 gatcctgttg gtatcggtcg atctcggctg gctgccgccg tccggctacg tgccgctgac
     2041 cgaggactgg cggcagtcgc tggcgaccac gatcatgccg gctttcgtac ttggcaacgc
     2101 gattgccgcg atcctgatgc ggcacacgcg ggccgcaatg ctgaccgcgc tggaccagga
     2161 ttatgtgcgc actgcgcgcg ccaagggtct ggcggaatcc cgcgttgtgc tgcggcatgc
     2221 gttgcgcaat gcgctgatcc cggttgtgac gttgggcgct ctcgaactcg gcacgctgct
     2281 gtccggtgcg gtgctgaccg agcaggtgtt ctcaatcccc ggctttggca agatgattgt
     2341 cgatgccgtg ttcaatcgcg actacccggt ggtgcaaggc gtcgtgctgg tgacggcgtt
     2401 tctttatgtg gtgctcaatc tgctggcgga tattctttac gtggtgatca atctcaggct
     2461 gcgcgggtca tgaccgatcc gttttatcgt atcgctccgg cgctgttcgg ggtgctcgcg
     2521 ttggtgctgt gggaagccgc ggtacgactg ttcgacgtgc cggtttatct ggttcccggc
     2581 ccgctcgcgg tgctggcggc gttcatgcag gatccggtgg gattgttgct gtcgttggct
     2641 gccaccctcg cagtcacatt cgccgccctg gtggcgtccg cggtattggg cgcggcgatg
     2701 gccatcgcga tgtccaccaa tcgtttggct caggcagcga tccagccatg ggcggtgatc
     2761 ttgcaggtga cgccgatcgt tgcgatcgcg ccgttgatca tcgtttgggt cggcaatccg
     2821 tttgcttccc tggtcgtgtg cgccatgatc gtggcgttct ttccggtgtt cgcgaatacc
     2881 gcgacgggtc tggcctccgc tccgccagag ctgtcggacc tgttccgcct gtatggcggc
     2941 agccgatggc ggacgctgac gttgctgcag ttgccggcgt cactgcctta tttcctcagc
     3001 ggcctgcgca tttccggagg cctcgcgctg gtcggcgcgg tggtcgcgga attcgtcgca
     3061 gggtccggcg gatttgcttc cgggctggcg taccgcatcc tcgaggcggg ctatcgattg
     3121 caaattccgc gcatgttcgc ggcactcttt ttgctgtctc tggccggcat cgcgatcaat
     3181 ttcggcctcg gattgttcgg ccgcctgatc ctgcagacga ggggaggggt gtgaacacgc
     3241 tgctgatatt tggtctcggt tattgcgggc gtgcggtggc ggatgccgcc acggacttca
     3301 atgttatggc aacgtcacgg tcgatcgatg cgcctgaccg ggccatggca gtcgagagcg
     3361 gctcctcggt tggtcgcgtg gaatcgtcac agctaacaag aatcccgttc gccgctgccg
     3421 aaccggcaat tgttgccgcg acccacgtgt tggtgacagt gccgcccgat gccgacggcg
     3481 atccggtact gaaccgttac tcagacgcaa tagccgccgc gccaatgctg cgctggatcg
     3541 gctatctgtc gagcaccgtc gtctacggcg accagggcgg tgcctgggtt gatgaagcaa
     3601 ccccgccgtc accctcgcaa ccgcgcggcc agcgccgact cgaggccgaa cgcgcgtggt
     3661 cacgcttcag ctcacgttac gctgtcgatt tgttccgcct cgccggcat
//
LOCUS       DATAVD010000369         1597 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2268517, whole genome shotgun sequence.
ACCESSION   DATAVD010000369 DATAVD010000000
VERSION     DATAVD010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2268517"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..480)
                     /locus_tag="VHX39_06890"
     CDS             complement(<1..480)
                     /locus_tag="VHX39_06890"
                     /inference="COORDINATES: protein motif:HMM:NF015857.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpW family outer membrane protein"
                     /protein_id="HEX3990882.1"
                     /translation="MKRILLASAMLSAIAVASPAKAQSMFDLSQPPVGKQAGTVMIRL
                     RAIGVIPLDASSSISGIGGKVNTTAQAAPEIDGSYFFTNNIAVELIAATTQHSLSASG
                     TAVGKVDVGSTWVLPPTLTVQYHFMPASQISPYVGAGVNASFFYGTRPAGPTVRSMSV
                     "
     gene            complement(605..>1597)
                     /locus_tag="VHX39_06895"
     CDS             complement(605..>1597)
                     /locus_tag="VHX39_06895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX3990883.1"
                     /translation="ARGYDTAAKGLSSYFVWLNRGKQSLVADIKDPNDAALLHRILAR
                     TDVFIQNLAPGAAARSGFGSTDLRKKYPRLITVDISGYGETGDYATMKAYDLLVQAES
                     GLAMITGHPAGPGRVGVSACDIACGMAAHAGVLEALIARGISGQGDALKISLFDGMAD
                     WMNVPLLYYEGTGQAPARLGLAHPSICPYGAFETADHGLVLISIQNEREWLEFCTKFL
                     DEPNLPEQPGFETNVIRVASRPMVDAHVGTMFSRLTRDQAAAKLRAANTAYGFVNDVA
                     AFSRHPALRRQTVATPNGPVAIAAPPVIHDDPRPLGAVPAIGEHSSAIRAEFTV"
BASE COUNT          310 a          462 c          506 g          319 t
ORIGIN      
        1 gacgctcatg cttctgacgg tcggaccagc cggtctcgtt ccgtaaaaga agctcgcgtt
       61 gacgcccgca cccacatagg gactgatctg tgaagccggc atgaaatgat attggaccgt
      121 cagggttggc ggtaacaccc aggtgctgcc gacatcgacc ttgccgacgg cggtgccact
      181 cgccgaaagc gaatgctgtg tcgtggcagc aatcaattcg acggcaatat tgttagtgaa
      241 gaagtaagaa ccatcgattt ccggtgcggc ctgcgctgtc gtattaacct tgccgccgat
      301 gccggaaatg gaactgctgg cgtcgagcgg gatcacaccg atcgcgcgta gccggatcat
      361 cacggtaccg gcctgtttcc cgaccggcgg ctggctcagg tcgaacatgc tctgcgcttt
      421 tgcagggctg gcgaccgcta ttgcgctcaa cattgccgac gccagcagaa tacgtttcat
      481 gatcgctcct tcgtcgcgcg catttgcgcg gcttcacagg agacagatca cactgaacgc
      541 gtcgcggcgt tgaggtatgt caaagcctgc cgtgcagctt cgtcatgtgg ccgatatgcc
      601 acgatcagac agtgaactcc gcgcggattg cagacgagtg ctcgccgatt gccggcactg
      661 cgcccaatgg acggggatcg tcgtggatga ccgggggcgc tgcgatggca accggaccgt
      721 tcggcgttgc caccgtttgc cgtcgcagtg cgggatggcg ggaaaacgca gcgacatcgt
      781 taacaaaacc ataagcggtg ttggcggcac gcagtttggc agccgcctga tcgcgggtga
      841 gccggctgaa catcgtgccg acgtgcgcgt cgaccattgg gcgactggcg acacgaatca
      901 cgttggtttc aaagcctggc tgttctggca ggttgggttc gtccaggaat ttcgtgcaga
      961 attcgagcca ttcgcgttcg ttctgtatcg agattaaaac cagcccgtgg tctgcggtct
     1021 caaatgcgcc atacggacag attgacggat gtgcgagacc gaggcgtgcc ggtgcctggc
     1081 cggtgccttc atagtacagc agcggaacgt tcatccagtc ggccatgccg tcgaacaggc
     1141 tgattttcag tgcatcgccc tgaccggaaa tgccgcgggc aatcaatgcc tcgaggaccc
     1201 cggcgtgtgc ggccattcca caggcgatgt cgcaggccga cactcccacc cgccccggtc
     1261 cggccgggtg gccggtgatc atggcaaggc cggattccgc ctggaccaac aaatcgtagg
     1321 ctttcatggt ggcgtaatcg ccggtttcgc catagccgga gatgtcgacc gtgatcaggc
     1381 gagggtactt tttccgcagg tcggtcgacc cgaacccgga acgtgcggcg gcgccggggg
     1441 cgaggttctg aatgaacacg tcagttcggg cgagaatacg atgcagcaat gccgcgtcgt
     1501 tcgggtcctt gatatcggcg accagacttt gcttgccgcg attgagccaa acgaaatagc
     1561 tcgaaaggcc tttggcagcc gtgtcgtagc cgcgcgc
//
LOCUS       DATAVD010000370         2794 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_966014, whole genome shotgun sequence.
ACCESSION   DATAVD010000370 DATAVD010000000
VERSION     DATAVD010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2794
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_966014"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VHX39_06900"
     CDS             complement(<1..368)
                     /locus_tag="VHX39_06900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3990884.1"
                     /translation="MISKFFIDRPVLANVLAIIMVVIGAVALYALPVAQYPNVVPPTV
                     SVTTRYPGASATTVMNTVALPIEEQVNGVQGMLYMQSTSSSDGTYSLTVTFAIGTDLN
                     FAQVLVQNRVSAALASLPQAV"
     gene            complement(365..1528)
                     /locus_tag="VHX39_06905"
     CDS             complement(365..1528)
                     /locus_tag="VHX39_06905"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX3990885.1"
                     /translation="MLATDKRIIRHCCGLVLVVLLSLAGCKKQNAFVAPPPPQVGVAH
                     AVQQEVTPYLELTGNAQAVNQVDLVARVQGFLQEIDYQDGAAAKQGDTLFVIEPAPYQ
                     AKLQQAQASLASAQAQLSQTAAEYKRQASLGRTDYSSQSQVDVALAAQQTNQANVDNQ
                     QSGVTQAAITLAYTRVTAPFDGQVEAHQVSIGSLVGFSGPTTLATIVQLDPIRVIGSI
                     SEQDVLRIKDTMPKRAFGLAEIRKVPIEVGRMDEPDYPHHGTLDYVAPAIDTASGTLT
                     IRGILPNTDRPLLPGMFVRMRIPLTPQKALALLVPDIALGSDQGGRYLLVVDKDDVVQ
                     QRPVQTGSAIGDLRVITSGLTTDDRVVVSDLQKASPGAKVVPNEVQINGSPKQ"
     gene            1715..>2794
                     /locus_tag="VHX39_06910"
     CDS             1715..>2794
                     /locus_tag="VHX39_06910"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX3990886.1"
                     /translation="MDATRKYAVIDPVTGKIDRRIFSDQAVYDDEMEKIFGRAWLMIG
                     HESLVPAPDDYFHTYMGEDPVILTRDGQGKLHALLNMCRHRGNRVVRCDDGNARRFMC
                     SYHGWTYRNDGSLETVPGETEAYYDTLDRPSLGLLEARLETYAGIVFATWAKDAPSLE
                     AYLGDARWYLDTLFNRLDGGMQALGPMKWLEPANWKTMVDNCSDNYHVPTSHLSSASV
                     QSRFLGRPRLSHEDQFSSPNKHVFVNGHSITFRDADDNAPRYVHGVSDKLMQMFKEYH
                     EAKTPEVERRLGRFRAHQVQLGNHSIFPNGILGFRLALPRGPLRTEFWHFVLLERDAP
                     EELKHAMRVGSQANNGAAGMFEQDDV"
BASE COUNT          532 a          869 c          854 g          539 t
ORIGIN      
        1 accgcctgcg gcagcgacgc cagcgccgcc gatacccggt tttgcaccag cacctgtgcg
       61 aaattcagat cggtgccgat cgcgaacgta acagtcagcg aataagtgcc gtcgctcgag
      121 ctggtcgact gcatgtacag catgccctgc acgccattga cctgctcctc gatcggcaag
      181 gcgacggtgt tcatgaccgt ggtggcactg gcacccggat accgcgtggt aacactcaca
      241 gttggcggca cgacattggg atattgcgcc accggcaatg cgtacagcgc gacggctccg
      301 atgaccacca tgatgatcgc cagaacgttg gcgagcaccg gccggtcaat gaagaatttc
      361 gagatcattg ctttgggctg ccgttaatct gcacctcatt tggcaccact ttcgcgccgg
      421 gagaggcttt ctgcagatcc gacaccacga cccggtcgtc ggtcgtcagg ccggaggtga
      481 tcacccgcaa atcgccaatc gcgctaccgg tctggaccgg acgttgctga acaacatcgt
      541 ccttatcaac cacgagcaag taccgcccac cctggtcgga acccagggcg atatcgggca
      601 ccagcaacgc gagcgccttc tgcggcgtca acggaatgcg cattcgcaca aacattcccg
      661 gcagcaaagg gcggtccgtg ttcggcagga tcccgcggat ggtcaacgtg ccgcttgcgg
      721 tatcaatcgc cggtgccacg taatcgagcg tgccgtggtg cggatagtcg ggctcatcca
      781 tccggccgac ctcgatcggc actttccgga tttcagccag cccgaaggcg cgctttggca
      841 tggtgtcctt gatccgcagc acgtcctgct cgctgatcga gccgatcacg cggatcggat
      901 caagttgcac gatcgttgcc aaagtggtgg gtccgctgaa acccaccaga ctgccgatcg
      961 aaacctgatg cgcctccacc tgaccatcga acggcgccgt gacccttgta taagccaagg
     1021 ttatcgcggc ctgggtcact cccgactgct gattgtcgac attcgcctga ttggtttgtt
     1081 gcgcggcgag tgccacatcg acctgcgact gcgacgaata gtcggttcgg cccagtgagg
     1141 cctggcgttt gtactcggct gcggtttgcg agagctgcgc ctgcgctgac gccagcgacg
     1201 cctgagcttg ctggagcttc gcctgatacg gtgccggctc gatcacgaac agagtatcgc
     1261 cctgcttcgc cgccgcgccg tcctgatagt cgatttcctg caggaagcct tgcacacggg
     1321 ccacaaggtc gacctggttc actgcctgag cgttaccggt cagttcaaga tacggcgtca
     1381 cctcctgctg gaccgcatgc gcgacgccga cctgaggcgg cgggggcgcg acaaaggcgt
     1441 tttgcttctt gcagccggcc agcgacaaca ggacgaccag caccaggcca cagcagtggc
     1501 ggataatccg tttatcggtt gcgagcaccg tcaactcccc ctcttggccg ttgcccggcg
     1561 cctgccgcgc gaacctgtgc tgcgccgcat cgattggacg atgccgttgc gtttggtgcg
     1621 gcgtcaactc ggcatggctg actgtagtcc aaacgaagcc gctatgatcc ctccggtctg
     1681 ctgttatcat ggtggggcga cagaggatcc ggatatggac gccactcgga aatacgccgt
     1741 catcgacccc gtcaccggca aaatcgatcg ccgcatcttc agtgaccagg cggtctacga
     1801 tgacgaaatg gagaagatct tcgggcgcgc ctggttgatg atcgggcatg agagcctggt
     1861 gcccgcgccg gacgattatt tccacaccta tatgggcgag gacccggtca ttctgacccg
     1921 cgatggccag gggaagctgc acgcattgct gaacatgtgc cgccatcgcg gcaatcgggt
     1981 ggtgcggtgc gatgacggca atgccaggcg cttcatgtgc tcctatcacg gctggactta
     2041 tcgcaatgac ggcagcctcg agaccgtccc tggtgagacc gaagcttact acgacacgct
     2101 cgatcggcca tcgctggggc tgcttgaggc ccggctggaa acttatgcgg ggatcgtctt
     2161 tgccacctgg gccaaggatg cgccgagcct cgaggcctac ctcggcgatg cgcgctggta
     2221 tctcgacacg ctgttcaatc ggctggacgg cggcatgcag gctttggggc cgatgaaatg
     2281 gctcgagccg gccaattgga agacgatggt ggacaattgt tcggacaact accacgtgcc
     2341 gaccagccat ctgtccagcg cttcggtgca gtcgcggttc ctcggccggc cgcgcctgtc
     2401 gcacgaggac cagttcagca gccccaacaa gcacgtcttc gtcaacgggc actcgattac
     2461 gttccgcgat gccgatgaca acgcgccgcg ctacgttcac ggcgtgtcag ataagttgat
     2521 gcagatgttc aaggaatatc acgaagccaa aacgcccgaa gtcgagcgcc ggcttggcag
     2581 gttccgcgcg caccaggtgc aactgggcaa tcattcgatt ttcccgaacg gcatccttgg
     2641 gtttcggctg gcgctgcctc ggggtccgct gcgcacggaa ttctggcatt tcgtgctgct
     2701 ggaacgggat gcgcccgagg aactgaaaca cgcgatgcgg gttggcagcc aggccaacaa
     2761 cggggcagcc ggcatgttcg agcaggacga tgtc
//
LOCUS       DATAVD010000371         1674 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2826789, whole genome shotgun sequence.
ACCESSION   DATAVD010000371 DATAVD010000000
VERSION     DATAVD010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2826789"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..289
                     /locus_tag="VHX39_06915"
     CDS             <1..289
                     /locus_tag="VHX39_06915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990887.1"
                     /translation="VSPSDPMTLFACVANAARGKAGRLYRSQDLGQSWTQFDHAIEVR
                     STMMAVTVHGRQQVHCVTRGGQTFSTLDGGGSWREFPLPEGAGAAVAVACG"
     gene            297..>1674
                     /locus_tag="VHX39_06920"
     CDS             297..>1674
                     /locus_tag="VHX39_06920"
                     /inference="COORDINATES: protein motif:HMM:NF023222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3990888.1"
                     /translation="MRTGADYRAALRDGRKVFVMGEGRIDDITTHPATSAMVEQYVTW
                     YDRHSDPEWADRLLNSAGVPWAFVLPRNSAEAAAIGRCIQETIFLSAGNITHTPLYGH
                     LIALGVLTAAETRNAGPHHAANAMAYRNKIAETGRFLTFCGGASVIGQRMQPDPKDRV
                     SVKRVSENDKGMVVRGRLGMHTSPAYAEDVYVGSLTGLQIDGHPAGFIVPVSAPGVTV
                     LCRKAALRDRDPFVSPLSGRYDELDGQMWLDDVFIPWEMVFAVDPEPEAIPRWLRWHH
                     LRGWLARAEFSLGVALALADAMGLKQNDATVEYVVDLIAEVQTVRSCLTAAELDPEFT
                     ESGYCVPRHSHLAAGGISLFKARQRIAEILRILPGSSLVVAPDDSDLSLPELAEGLEE
                     VFGGGGYSARQRSALLKLAWDHASSALDGRESAFELHASAGMPGWRAWLRRSFTDYNR
                     LANAVLKEI"
BASE COUNT          311 a          461 c          564 g          338 t
ORIGIN      
        1 cgtatcgccg agtgatccga tgacactgtt tgcgtgtgtc gccaatgccg cacgcggcaa
       61 ggcgggacgg ctgtatcgca gccaggatct gggacaaagc tggacgcaat tcgatcatgc
      121 gatcgaagtg cgaagcacga tgatggcggt caccgttcat ggtcggcagc aggtgcattg
      181 cgtcacacgt ggcggccaga cgttcagcac gttggatggc ggtggtagct ggcgcgaatt
      241 tccattgccc gagggcgccg gcgctgcagt ggccgttgca tgcgggtaac ggcagcatga
      301 gaaccggcgc cgactaccga gccgccttgc gcgacggtcg caaggtcttc gttatgggcg
      361 agggccgtat cgatgacata accacccacc ccgccaccag cgccatggtg gagcaatacg
      421 tcacttggta cgaccgtcat tccgatcccg aatgggctga caggttgcta aatagcgccg
      481 gtgtgccctg ggcttttgtg ctgccgagaa acagtgctga ggcggcagcg attgggcgat
      541 gcatccagga aacgattttc ttgagtgcag gcaacattac gcacactccg ttgtacggcc
      601 atctgattgc gcttggcgtc ctgacggcgg cggagacgcg caacgcagga ccacaccatg
      661 ccgccaacgc aatggcctat cgcaacaaga tcgcagagac gggacggttt ctgacatttt
      721 gcggcggggc ctcggtgatt ggccagcgca tgcagcccga tccgaaagac cgggtttcgg
      781 tgaaacgtgt cagtgaaaac gacaaaggca tggtggtgcg ggggcggctt ggtatgcaca
      841 ccagtcctgc ctatgccgag gacgtgtatg tcggctcttt gaccggcctg caaatcgacg
      901 gccacccggc cggcttcatc gttccggtga gtgcaccagg cgtcaccgtg ctgtgcagaa
      961 aggccgcgtt acgcgaccgc gacccgtttg tctcaccgtt atctggccgt tacgatgagc
     1021 tggacgggca gatgtggctg gatgacgtgt tcattccgtg ggaaatggtg ttcgccgtcg
     1081 atccggagcc ggaggcgatc cctcggtggc tgcgctggca tcatttgcgg ggctggctgg
     1141 ccagggccga gttcagtctc ggcgtggccc tcgcattggc ggatgcgatg gggctgaaac
     1201 aaaacgacgc aaccgtcgaa tacgttgtcg atctgatcgc cgaggtgcag accgtacgat
     1261 cgtgcctgac cgctgcggag ctcgatccgg aattcacgga aagtggttat tgcgtgccgc
     1321 gtcattcgca tttggcggca ggcgggattt ctctgttcaa ggcgcgccaa cggatcgcgg
     1381 aaattttgcg gatattacct ggttcgtcgc tggtggtggc accggatgat agtgatttat
     1441 cgctgcctga actggccgag ggactggagg aagtgtttgg cggcggtggc tattcagccc
     1501 ggcaacgttc ggcgctgttg aagctggcgt gggaccatgc atcgtctgcg ctcgacgggc
     1561 gcgagtcagc gtttgaactg cacgccagcg ccggcatgcc cggctggcgc gcctggctgc
     1621 ggcggagttt taccgattac aaccgactgg ctaacgcggt gctgaaggaa atca
//
LOCUS       DATAVD010000372         3243 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2455940, whole genome shotgun sequence.
ACCESSION   DATAVD010000372 DATAVD010000000
VERSION     DATAVD010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3243
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2455940"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..669
                     /locus_tag="VHX39_06925"
     CDS             <1..669
                     /locus_tag="VHX39_06925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HEX3990889.1"
                     /translation="GELGVRGWLAALDVTTGKILWRAYATGPDKDVLIRPGFHSFYPS
                     DRGTDLGVTTWPKDAWQTGGGTMWGWIAYDSDLNLIYYGAGNPGPWNQEQRPGDNKWT
                     TTLFARDPDTGFAKWALQYNPHDEHDYDGINEHILVDLNVNGRARNLMLHPHRNGHLY
                     MIDRESGEILSAEPYGYVNSILSVDLKTGRPVLNPDKLTKVGTVVHDICPTVSVCKWW
                     ALTR"
     gene            666..956
                     /locus_tag="VHX39_06930"
     CDS             666..956
                     /locus_tag="VHX39_06930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990890.1"
                     /translation="MNTPPAHALSRRGIVQNVRGYMLYGDYRQPHPPSAIIDAVKNGD
                     VDIAIVWGPLAGYFAAQGSTPLTVEPVQPWSDGVPHFDGGSPRRHSAAATPQ"
     gene            1100..2290
                     /gene="fdhA"
                     /locus_tag="VHX39_06935"
     CDS             1100..2290
                     /gene="fdhA"
                     /locus_tag="VHX39_06935"
                     /EC_number="1.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007091353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018467 - formaldehyde dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0046292 - formaldehyde metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formaldehyde dehydrogenase,
                     glutathione-independent"
                     /protein_id="HEX3990891.1"
                     /translation="MSRNRGVVYTRPGEVQVQDIADPKFENPQGRKIEHGVILKVVST
                     NICGSDQHMVRGRTTAPAGMVLGHEITGEVIEKGSDVEMVDLGDLVSVPFNVACGRCR
                     CCQETNTGVCLTVNPGRAGGAYGYVDMGGWIGGQARYVMVPYADFNLLKFPDKQQAMS
                     KIMDLTMLTDILPTGFHGALMAGVKPGSTVYVAGAGPVGLAAAASAQLLGAAVIMIGD
                     MNETRLGHARNVGFVPIDLTKHDRLGEQVAAIIGEPTVDAVVDAVGFEAKGHGGGDQP
                     AIVLNQAMEIIRPAGAIGIPGLYVTEDPGAHDAAAKTGNLSLRLGLGWSKSNSFHTGQ
                     TPVLRYNRQLMMALLNDRLPIAKIVNARAISLEDAPKGYAEFDKGVAAKFVLDPHGLL
                     AKAA"
     gene            2318..2716
                     /locus_tag="VHX39_06940"
     CDS             2318..2716
                     /locus_tag="VHX39_06940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HEX3990892.1"
                     /translation="MMTMNKAQRIIEAATAKAKEIGQPMNIAVVDAGTNLTAFARMDG
                     AWLGSIDIAINKAFTAKAFDLSTQDLGKNSQPGDQFFGIHVSNHTRVMIFAGGIPIKE
                     NGQVVGAVGVSGGSGVQDQTAAEAAVAALL"
     gene            2779..3183
                     /locus_tag="VHX39_06945"
     CDS             2779..3183
                     /locus_tag="VHX39_06945"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX3990893.1"
                     /translation="MMTIVQESQWSSRMMRALIAGLLLAGFATGSLAADPAAGQKVFN
                     TQCGICRSASEGKNGLGPSLFDVVGRRAGSVPDFNYTADHKKLGISWTTAALDKYLTN
                     PRAMVPDTSMIYPGLKDNAQRANLIAYLATLH"
BASE COUNT          682 a          983 c          973 g          605 t
ORIGIN      
        1 ggcgagctcg gcgtgcgcgg ctggttggcg gcgctcgatg tcaccaccgg taagatcctg
       61 tggcgggcct acgccaccgg gccggacaaa gacgtgctga tccggcccgg gtttcactcg
      121 ttctaccctt cggatcgcgg caccgatctc ggcgtcacca cctggccgaa ggacgcttgg
      181 cagaccggag gcggaacgat gtgggggtgg atcgcctacg attctgacct gaacttaatt
      241 tattacggag ccggcaatcc gggcccgtgg aaccaggagc agcgtccagg cgataacaaa
      301 tggactacca ctcttttcgc acgcgatccc gataccggtt tcgccaaatg ggcgctgcaa
      361 tataacccgc atgacgagca cgactacgac gggatcaatg aacacattct ggtcgatttg
      421 aatgtgaacg gcagggcgcg taacttgatg ctgcatccgc accgcaacgg tcatctttac
      481 atgatcgatc gtgagagcgg cgagatcttg tctgccgagc cctacggcta cgtcaattcg
      541 attctcagcg tcgatcttaa gaccgggcga ccggttttga acccggacaa gctcaccaag
      601 gtcggtaccg tggtgcacga catctgcccg accgtatcgg tgtgcaaatg gtgggctctg
      661 acgcgatgaa cacgcctccg gctcacgccc tctcccgccg cggcatcgtg cagaacgtgc
      721 gcggctacat gttgtatggc gattaccgcc aaccgcaccc gccatcggcg atcatcgatg
      781 cggtgaaaaa cggcgacgtc gatattgcga tcgtttgggg ccctctggcc ggttacttcg
      841 ccgcacaggg ttccacgccg ttgaccgtcg agccggtgca gccatggagc gatggcgttc
      901 cacatttcga tgggggctcg ccgcggcgac atagcgctgc tgcaacgcct caatgactca
      961 ctcgaacgaa accattccga aatcgcggca attctcgccg catatcacgt gccggttctg
     1021 cgcgaggatt ttgcattgcc acaatcggca ccgcattgaa acgaaatcgc ttcgacccac
     1081 ccagcaagag aggtttgtca tgagtagaaa tcgcggcgtc gtctatacca ggccaggtga
     1141 ggtccaggtt caggatatcg ccgatccaaa gttcgagaac ccgcaaggcc gcaagatcga
     1201 gcatggcgtg atcctgaagg tcgtttcgac caatatctgc ggatccgacc agcacatggt
     1261 ccgcggtcgc acgactgctc cggccggcat ggtgctcggg cacgagatca ccggtgaggt
     1321 gatcgagaaa ggctccgatg tcgaaatggt cgatctgggg gatctcgtgt cggtgccgtt
     1381 caacgttgcc tgtggacggt gccgctgctg ccaggaaaca aatacgggcg tctgcctcac
     1441 ggtcaatcct ggtcgtgccg ggggggccta tggctatgtc gacatgggtg gctggattgg
     1501 cggccaggcg cgctacgtca tggtccccta tgccgacttc aacctgctca aattccccga
     1561 caagcagcag gcaatgtcca agatcatgga cctgaccatg ctgacggaca tcttgccgac
     1621 cggcttccac ggcgccttga tggcgggcgt caagccgggc tcgacagtct atgttgccgg
     1681 cgccggtccg gtcggcttag cggcggccgc ctcagcccaa ctactgggtg cggccgtgat
     1741 catgatcggc gatatgaacg agacgcgtct gggccacgcc aggaacgtcg gctttgtccc
     1801 gatagatctg acgaagcacg accgcctggg ggaacaggtg gccgcgatta tcggcgaacc
     1861 cacggtcgat gcggttgtcg atgctgttgg cttcgaagcc aagggccatg gcggtggcga
     1921 tcaacccgcc atcgtgctga accaggcgat ggagatcatc cgcccggccg gtgccatcgg
     1981 cataccggga ttgtacgtca ccgaggatcc cggagcgcac gacgccgctg ccaagaccgg
     2041 caatctcagt cttcgactgg gccttggctg gtcgaagtcg aattcgtttc acaccggcca
     2101 gacacccgtc ctgcgctaca atcgccaact catgatggca cttctgaacg accgcctgcc
     2161 gatcgcgaag atcgtcaatg ccagagccat aagccttgag gatgcaccga agggctatgc
     2221 cgaattcgac aaaggcgtcg ccgccaaatt tgtgctcgac ccgcatggcc tgttggcgaa
     2281 ggcggcctag gtaacctcaa tcaggagttc aactgtcatg atgacaatga acaaggccca
     2341 gaggatcatt gaagcggcga ccgccaaggc caaggagatc ggccaaccga tgaatattgc
     2401 ggtggtcgat gccggcacca atctcacggc tttcgcacgg atggacgggg cgtggcttgg
     2461 cagcatcgac attgccatca acaaagcctt cacggcgaaa gcgtttgacc tctcgacgca
     2521 ggacctgggt aaaaacagcc agccgggcga ccagttcttc ggcatccacg tatcgaacca
     2581 cacaagagtg atgatcttcg cgggtggcat tccgatcaag gagaatggcc aggtcgtagg
     2641 cgccgtaggc gtcagcggag gcagcggcgt acaggaccaa acggccgccg aagcagcggt
     2701 cgccgctttg ctttagcgtc acgcggcaaa cttttctgtg ggacctgcaa atcccacgga
     2761 aaagtcaggc tgcaccaaat gatgacgatc gtccaggaaa gccagtggag ctcacgcatg
     2821 atgcgcgcct tgattgccgg cttgttgctc gcaggatttg ccaccggctc tctggccgcc
     2881 gatcccgccg ccggtcagaa agttttcaac acgcagtgcg gcatctgccg ctccgcgtca
     2941 gagggcaaga acggcctcgg cccgagcctg ttcgacgtgg tcggccgacg ggccggcagt
     3001 gtgccggatt tcaactacac cgcggaccac aagaagctcg ggattagctg gaccaccgcc
     3061 gcgctcgaca aatatctcac caatcctcga gcgatggtgc cggacacgtc aatgatctac
     3121 ccgggcctga aggacaacgc gcagcgcgcc aacctgatcg catatcttgc aacgctgcac
     3181 taagggtctg attacatcgg acaaatctcc cggactcagt gcatcccaga acgcaagcac
     3241 tgc
//
LOCUS       DATAVD010000373         1570 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_782197, whole genome shotgun sequence.
ACCESSION   DATAVD010000373 DATAVD010000000
VERSION     DATAVD010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_782197"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..>1570)
                     /locus_tag="VHX39_06950"
     CDS             complement(3..>1570)
                     /locus_tag="VHX39_06950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEX3990894.1"
                     /translation="ADVIAALQGYAASPLVLRQMPLAEDGRVGGYVDLMSERAYRYRK
                     GQASELIRIPDSVVAEEAAERGRLVETLADRDDVLLEKVLEDIRPTPEELYLDMRKDL
                     LAGAVIEVLLAAGEASHGVRRLWKALRHETPNAAETCERKGIDPEGPPLAQVFRTEYA
                     GHTGKLSYARVWRGEIKDGATLGGTRLGGIYHFVNSELSKSPGCVSGDIVALGRLDGV
                     PTGATVSPGSTPEQLPFPPAPTPVYALAVTTTDRKDDVRLSDALRKLAEEDQSLTVTQ
                     DHETGETVMHGQGEMHLLNAIEHMAKNYNLKMTTRRPSIAYRETIKAAVHEHGRLKRQ
                     TGGHGQFADVKIDIAPRERGSGFQFVDKVVGGSVPRNFIPVVGESAEEAAKKGPFGYP
                     VVDISVTLVDGGFHAVDSSDMAFRTATQIAMREGLAKAEPVLLEPIDHVTISVPNDLT
                     PRAQRLLTGRRGQILGFGEREGWPGWDDVEALVPEAELHDLIIDLRSQTQGLGTYRKR
                     FDHLAETKAPAKA"
BASE COUNT          285 a          532 c          439 g          314 t
ORIGIN      
        1 tatcacgcct tcgccggcgc cttcgtttcg gccaggtggt cgaaccgctt acgatacgtt
       61 cccaaccctt gcgtctgcga ccgcaaatcg atgatcagat cgtgcagttc ggcctccggc
      121 accagcgcct caacatcgtc ccagcccggc cacccctcgc gctccccgaa ccccaggatc
      181 tggccgcgcc gtccggtcag cagccgttgt gcgcgtggtg tcagatcgtt tggcacactg
      241 atcgtcacgt gatcgatcgg ttccagcagc acaggctcgg ctttcgccag tccttcgcgc
      301 atggcgattt gcgtcgccgt gcgaaacgcc atgtcggagc tgtcgacagc atgaaaacca
      361 ccgtccacca gcgtcaccga gatgtcgacc acgggataac caaatggtcc tttcttcgcg
      421 gcctcttccg ccgactcgcc gaccaccgga atgaaattgc gcggcaccga gcctccgacg
      481 actttgtcga caaactggaa tccgctgccg cgctcccgtg gcgcaatatc gatcttcacg
      541 tcagcgaact gaccatgtcc gccggtttgc cgcttcaatc tgccatgctc gtgcaccgcg
      601 gctttaatgg tttcccgata tgcgatcgac ggacgccgcg tcgtcatctt cagattgtag
      661 ttttttgcca tgtgctcgat ggcgttcagc aggtgcatct caccctggcc atgcatgacc
      721 gtttcgccgg tttcatgatc ctgcgtcaca gtcagagatt gatcttcctc tgccagttta
      781 cgcaacgcat ccgacaggcg gacatcatcc ttgcgatcgg tagttgtgac ggccaaggca
      841 taaaccgggg taggcgccgg cgggaacggc aattgctcgg gcgtgctgcc aggcgaaacc
      901 gttgccccgg tgggcacgcc gtccagccgg cccaatgcaa cgatgtcgcc ggagacacaa
      961 ccgggagatt tcgataactc gctgttgacg aaatgataaa tcccgccaag ccgtgtgccg
     1021 cccagcgtgg cgccgtcctt gatttcgccg cgccagaccc gggcgtatga caacttgccg
     1081 gtgtggccgg cgtattcggt gcgaaacacc tgcgccaacg gcggtccttc cgggtcgatg
     1141 cccttacgct cacaggtttc ggccgcattc ggcgtttcgt gacgcaacgc cttccacagg
     1201 cggcgcaccc cgtgactggc ctcaccggcg gcaagcagga cctcaatcac cgcgccggcc
     1261 agcaggtcct tgcgcatatc gagataaagt tcctccggcg taggccgaat atcctccagc
     1321 actttttcca gcagaacatc atcacggtcg gccaacgtct cgaccaggcg gccgcgttcg
     1381 gcggcctcct ccgcgacgac ggaatctgga atgcggatca gttccgatgc ctgacccttg
     1441 cgatagcggt aggcacgctc gctcatcaaa tcgacatagc cgccgacccg gccgtcttcc
     1501 gccagcggca tttggcgcaa caccagcggt gaggcggcgt atccctgcaa tgcggcgatg
     1561 acatcggcga
//
LOCUS       DATAVD010000374         2073 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3386344, whole genome shotgun sequence.
ACCESSION   DATAVD010000374 DATAVD010000000
VERSION     DATAVD010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3386344"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..613
                     /locus_tag="VHX39_06955"
     CDS             <1..613
                     /locus_tag="VHX39_06955"
                     /inference="COORDINATES: protein motif:HMM:NF015803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HEX3990895.1"
                     /translation="RPAIDGISVRLSKGMDILGATTDGQASTAPRIGEQTNLLKFNFQ
                     LSRTQTLFYPWQGASVALMGLLTGQWSNSILPPSEQFYLGGAQFTRGYYSGQVAGDKA
                     LATTAELQLNTGIDLSHVGLSAEVNSQFYLFYDWGEVWQNQSNTLAPRLASTGGGVRL
                     QATRYVEVDFEGLARLNRYPTGVGTGISALNGGAFYWRVLTHF"
     gene            680..>2073
                     /locus_tag="VHX39_06960"
     CDS             680..>2073
                     /locus_tag="VHX39_06960"
                     /inference="COORDINATES: protein motif:HMM:NF017658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HEX3990896.1"
                     /translation="MAKASERGQVRLLGVIGRRRSELLIGTALQTTTLLVLSSPVWAQ
                     PAPTAMPTGGVVVGGSAAISQSANTTTVNQASARAAINWQSFNVGSQRQVTFAQPSAS
                     AIALNRVTGPDPSQIAGKISANGQVVLVNQAGVTFYKGAQVSAQSLIVSTSNVSTANF
                     MAGKLAFDQPGNANASVVNQGTITVKQAGLAALVAPSVANSGVINAQLGHVVLAGAKT
                     ATLDLYGDGMLSLDVTNQITKAPVGADGKPVAALVTNTGVIRADGGTVQLTAAAADGV
                     LQTLVQAGGKITANSVGTQTGTVTVAGIGGSVTVTGVLRAAGTAAGTKGGQVAVNATG
                     DVTLAATARIDASGVAGGGTVAVGTTLQRATGGPGTVSAITAANVTIRKGATITANDT
                     KVGNGGRVTVLSAGTTTMNGAISAMGGSQSGNGGFAEVSGNNLGLSGSVNLSAPNGLV
                     GTLLLDPTDLNIIAS"
BASE COUNT          401 a          626 c          668 g          378 t
ORIGIN      
        1 acggccggca atcgacggca tctccgtccg actatccaaa ggcatggaca tattgggcgc
       61 gaccaccgat ggtcaggcga gcacggcgcc acgcatcggc gaacagacaa acctgcttaa
      121 attcaatttt caactcagcc gtacgcagac gttgttctat ccgtggcaag gtgcgagcgt
      181 cgcattgatg ggcttgctga cgggacaatg gagcaattca attttgccgc cttctgagca
      241 gttttatctc ggtggcgcgc aattcacccg cggctattat tccggccagg ttgcggggga
      301 caaggcgttg gcgaccacgg ccgaactgca attgaacact ggcatcgatc tctcgcatgt
      361 tggcttgtcg gcggaggtca acagtcagtt ctacctgttc tacgattggg gtgaggtttg
      421 gcagaaccag tcgaacactc tggcgccgcg gcttgcctcg accgggggtg gcgtaaggct
      481 ccaggcgacc cgctatgttg aagtcgattt tgagggattg gcgcggttga accgctatcc
      541 cacaggggtc ggcactggca tatcggcact gaatggcggc gctttttact ggcgtgtgct
      601 gacccatttc tgatccaaag cgcacgccga aaaacgaacg gaccggtcca gatttccgga
      661 cgacggggag gattgtctga tggcaaaagc cagcgagcga ggccaggtgc gactgctcgg
      721 cgtaatcggc cgccggcgtt ccgaactgct gatcggcact gctttgcaga ccaccacgct
      781 gctcgtgctg agctctccgg tctgggcgca gccagcgcca accgcgatgc cgaccggtgg
      841 tgttgtcgtg ggcggaagtg cggcgatctc acaatccgcc aacaccacga cggtcaatca
      901 ggccagcgcg cgggccgcga tcaattggca aagctttaat gtcggcagcc agcgccaggt
      961 tacgttcgct caaccatccg ccagtgccat cgcgttaaat cgcgtgaccg ggccggaccc
     1021 atcacaaatc gctggcaaga tcagcgccaa cggtcaggtt gttttggtga accaggcggg
     1081 cgtgactttc tacaaaggcg cccaggtcag cgcccagagt ctgatcgttt ccacgtcgaa
     1141 cgtttccacc gccaacttca tggccggcaa gctggccttc gaccagccgg gcaacgccaa
     1201 cgcgagcgtg gtgaaccagg gcaccatcac cgtcaaacaa gccggcctcg cggctttggt
     1261 ggcgccaagc gttgccaatt ccggggtcat caatgcgcag ttgggtcacg tcgtactcgc
     1321 cggagcgaag actgcgacgc tcgaccttta cggcgatggg atgctgtcgc tcgacgtcac
     1381 caatcagatc accaaggctc ccgtgggagc cgacggcaaa ccggtcgccg cgcttgtcac
     1441 caacaccggc gtgatcagag ccgacggcgg caccgtgcaa ctgaccgcag cggcggcgga
     1501 cggtgtgctg caaaccctcg ttcaggccgg cggcaagatt accgccaact cggtcggtac
     1561 gcagaccggc acggtgacgg tggctggcat cggcgggtcg gtgacggtga ccggtgtcct
     1621 gcgcgctgct ggtacggcgg cgggaaccaa gggcggtcag gttgcagtca acgccaccgg
     1681 cgatgtgacg ctggccgcaa cggcacggat tgatgcgtcg ggcgtggcgg gcggcggcac
     1741 tgtggcggtc ggcacgacgt tgcaacgtgc cactggcggc ccagggacag tctccgcgat
     1801 caccgcggca aatgtgacga tacgcaaggg cgccacaatc accgccaacg acaccaaggt
     1861 gggcaatggc gggcgggtca ccgtgctgtc tgccggcacg accacgatga acggcgcgat
     1921 ttctgccatg ggcggctcgc agtcgggcaa cggcggcttc gccgaggtat cgggtaacaa
     1981 tctcggtctg tcgggtagcg tgaatctttc ggcaccgaac ggtttggtgg gaacgctgct
     2041 gctcgatccg accgatctca acatcattgc gtc
//
LOCUS       DATAVD010000375         3206 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_966510, whole genome shotgun sequence.
ACCESSION   DATAVD010000375 DATAVD010000000
VERSION     DATAVD010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3206
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_966510"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..174)
                     /locus_tag="VHX39_06965"
     CDS             complement(<1..174)
                     /locus_tag="VHX39_06965"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3990897.1"
                     /translation="MNTIAEPAALDVRDVSHAYGTTKALQNVSLKVPQSRFTALLGLD
                     GAGKTTLFSLITRL"
     gene            complement(272..1450)
                     /locus_tag="VHX39_06970"
     CDS             complement(272..1450)
                     /locus_tag="VHX39_06970"
                     /inference="COORDINATES: protein motif:HMM:TIGR03863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990898.1"
                     /translation="MIAATAGATLAASTRSVRAETAPIRIGYIRWTEQQPTISRLDKA
                     PPDNGLAGAMLGVSDNNTTGRFMNQQFEISGAPLAVDDDPSARLGAMASDEIAFILTD
                     APADRVLALAAASRTAGITLFNIRAPDDSLRQQDCRDNVIHVAPSRSMLTDALGQYLV
                     WKKWLRWVLAYGSHPEDALLADAWRRSAKRFGANIVKELEFKDTGGARQTDSGVVQVQ
                     QQLPVFTQELPDYDVLIAADENEVFAGYLPYRTWDARLVAGSAGLRPVSWDPNSESWG
                     GAQLQDRFIRMAHRLMTELDMQAWTACRMIGEAASRSASVDPAKILHEMQQPGFGVAA
                     YKGEKLSLRDWDWQLRQPILLSDGRTIVSVSPQPGFLHQVTALDTLGFDRPETKCQFR
                     "
     gene            complement(1624..>3206)
                     /locus_tag="VHX39_06975"
     CDS             complement(1624..>3206)
                     /locus_tag="VHX39_06975"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX3990899.1"
                     /translation="HRPHLEGDFDMKRDFAAVAGLLMLSGCGMERIEVRPASVGLSTV
                     SPAERAYQEGKADLAAGRPGLAIVAFETALANDPGSVKVLNGLGAAYDGLQRFDVAQS
                     FYKQALQREPNSPDVMNNMAISLQMAGKPEAMQWFARAERLDPKNPVIDANVNLAQTT
                     PAATPSATMMASRYDPSAIPMDRPRIERASPLEYDVELPADRPTDLGKMVRSDSPRSV
                     ASVQPKISVPPIVDASGPAPPIRNLIVPTPPVDETANPTSLGRDTAGPARPASPAPRI
                     GNITSQATPPATVPEAITATLIPAPVVVTSSQPTPLARPAVTVFDPTLLACAPNVAPT
                     TLNAIIQVESGGNPLALHVNGTDQQPPPARDPAEAARMAESYVGKGYSVDVGLMQVNT
                     RNLAATGHSIQQALDPCTNILHGSTILSADYARASRTRGDDPYALLSALSAYNTGDFH
                     RGFDNGYVAQVVSSNQSAGPRRQHASSPAVHHVAAAEQRKTVEVSERMRVLKQELDRL
                     EQTANQSNAEKLMASGSM"
BASE COUNT          588 a          979 c          996 g          643 t
ORIGIN      
        1 gagcctcgta atcagcgaaa acaacgtcgt cttgccggcg ccgtcgagac cgagcaaagc
       61 ggtgaagcgc gattgcggta ccttcaggct gacattctgc agagctttgg tggttccata
      121 agcgtgactg acatcacgca cgtcgagcgc ggccggctcg gcgatcgtat tcatttcggt
      181 gacaccacaa cgtcccggtt tgataccacc acctcaggcg cggcgaaatc gattggcgag
      241 atgtcgttcg cgcagcaccc gacacggcag ttcatcgaaa ttggcacttg gtttccgggc
      301 gatcgaaacc aagcgtgtca agcgccgtca cctggtgcag gaagcctggc tgcggcgata
      361 ccgaaacgat cgtgcggccg tcggacagca agatcggttg gcgaagttgc cagtcccagt
      421 cacggagact cagcttttct cccttatagg ccgcgacacc aaacccgggt tgttgcattt
      481 catgcaggat cttcgccgga tcgaccgacg cgctacggct ggcggcctcg ccgatcatgc
      541 ggcacgcggt ccaggcctgc atatcaagtt cggtcatcaa tcgatgcgcc atacgaatga
      601 agcggtcctg gagttgcgcg ccgccccagg attcgctgtt cggatcccag ctcaccggtc
      661 gcagtccggc cgagcctgcg accaggcgtg catcccaggt gcgatatggc aaatagcccg
      721 cgaacacctc gttctcatcc gcggcaatga gcacgtcata gtcgggcaac tcttgcgtaa
      781 acaccggtaa ctgttgctgt acctgcacca cgccggaatc agtctgccgc gcacccccgg
      841 tgtccttgaa ttcgagttct ttgacgatgt tggcgccgaa acgtttcgcc gagcgacgcc
      901 aggcgtctgc caacaaggca tcctccgggt gcgaaccata cgccaaaacc caacgtagcc
      961 acttcttcca caccagatat tggcccaaag catcggtcag catactgcgc gatggcgcga
     1021 cgtggatcac attgtcacgg cagtcctgct gcctcagcga gtcgtcgggc gcccggatat
     1081 tgaacagcgt gatccccgcg gtgcggctgg ctgcggcgag ggcaagcacc cggtccgccg
     1141 gagcgtcggt caaaatgaac gcaatttcgt cgctcgccat ggcgcccaac cgcgctgacg
     1201 gatcgtcgtc aacagccagt ggtgcgcccg agatctcgaa ttgttggttc atgaagcgac
     1261 cggttgtgtt gttgtcgctc acgccgagca tggcgccggc caacccgtta tcgggggggg
     1321 ccttgtccag tcgggagatc gtcggctgtt gctcggtcca gcgaatgtat ccgatgcgga
     1381 tgggcgctgt ttccgcacgt accgagcgtg tcgaggccgc cagggtggca ccggccgtcg
     1441 ctgcgatcat ggctcgtctg ctgaaccagt cgcgtggggt cagcgaagga cgtttcattg
     1501 cggcgaggat ggaggacttc ccgcgccgat tcaagctgcc atgtgccgga aaccggtgcc
     1561 ataaccaaac ccagccccgg cgcgccgtgt cgactgcccg cttagatcag gcagcgcgtg
     1621 gagtcacatt gaaccagacg ccatcaactt ttccgcgttg gattgattgg cggtttgttc
     1681 cagacgatcg agctcctgtt tgagaacacg catccgctcg ctcacctcaa ctgtcttgcg
     1741 ttgttcagcg gcggcgacgt gatgaaccgc cgggctcgat gcatgctgcc ggcgtggtcc
     1801 cgcagactga ttgctcgaca ccacctgtgc cacgtagccg ttgtcgaagc cccggtgaaa
     1861 atcgccggta ttgtaggcac tgagtgccga cagcaaggca taagggtcgt cgcctcgcgt
     1921 ccgcgaagcc ctcgcatagt cggcggaaag aattgttgag ccgtgcagga tattggtgca
     1981 cggatcgagc gcttgctgga tactgtgtcc ggtcgccgcc aggttacgcg tgttgacctg
     2041 catcaggcca acatcgacac tgtaaccttt gccaacatag ctttccgcca tacgcgccgc
     2101 ttcggccgga tctcgcgccg gtggcggttg ttggtcggtg ccgttgacat gcaacgcgag
     2161 cggattaccg ccgctttcca cctgaatgat cgcgttgagg gtggtgggag ccacgttggg
     2221 tgcgcaggcg agcaatgttg ggtcaaacac ggtcaccgcc ggtcgcgcca aaggtgtcgg
     2281 ctgactgctg gtaaccacca cgggcgctgg tatgagggtg gcggtgatcg cctctggcac
     2341 cgtcgcgggt ggcgtggcct gactggtgat attgcctatg cgaggcgctg gcgaggcagg
     2401 ccgcgccgga ccagcggtat cgcgaccgag cgatgtagga ttggcggttt cgtccaccgg
     2461 gggcgtcggg acaatcaggt tgcgaatcgg cggcgctggg ccactggcgt cgacaatggg
     2521 cggcacactg atcttcggct gcaccgatgc gacgcttcgt ggcgagtcag accgcaccat
     2581 cttgcccaga tcggtcgggc gatctgccgg gagttccacg tcgtattcca gagggctggc
     2641 gcgttcgata cgaggacgat ccatcggaat ggcgctggga tcgtaacggc ttgccatcat
     2701 cgtcgcgctc ggcgttgcgg cgggcgttgt ctgggccaga ttgacattgg cgtcgatcac
     2761 cggattcttc ggatccagtc gttccgcgcg ggcaaaccat tgcattgctt ccggtttgcc
     2821 ggccatctgc aacgaaatcg ccatgttgtt catgacgtcc ggactattcg gttcccgttg
     2881 caatgcttgc ttgtagaacg attgcgccac atcgaagcgc tgcaatccgt cgtaggcggc
     2941 gccgagcccg ttgagtacct tgaccgagcc tggatcgttg gccagggcag tctcaaaagc
     3001 cacgatcgcc aggccaggcc ggcccgccgc cagatcggcc ttgccttcct gatacgctcg
     3061 ttccgctggt gaaaccgtcg acaacccaac gctggccgga cgaacttcaa tccgttccat
     3121 gccacagccg gaaagcatca gcagaccggc gactgccgcg aaatctcgct tcatatcgaa
     3181 atccccttcc aggtgtggac gatgtg
//
LOCUS       DATAVD010000376         5915 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1712021, whole genome shotgun sequence.
ACCESSION   DATAVD010000376 DATAVD010000000
VERSION     DATAVD010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5915
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1712021"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..777
                     /locus_tag="VHX39_06980"
     CDS             <1..777
                     /locus_tag="VHX39_06980"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3990900.1"
                     /translation="NRINQALLVDQLNRAGFSTFAASDGKEAVEAVRRGGFDAILMDV
                     QMPEIDGIEATRRIRTSERRYRIPIIGLTAHTGSVVRKRCLDAGMDLVLHKPVDFSCL
                     PLRLREVIAAAHVATTGEADGDTARIIAGGLEIDDEYLEILLAEVGVKRARICVTAFL
                     ADTTVHLSAMARLMNGNEWDELGRLAHSLSGIAGTLGAINLADGLLMLEDAARLEGQV
                     HVDTALNDVRSTWERTRIMILPRFEALAAARTRAAANRAA"
     gene            complement(809..1354)
                     /locus_tag="VHX39_06985"
     CDS             complement(809..1354)
                     /locus_tag="VHX39_06985"
                     /inference="COORDINATES: protein motif:HMM:NF014494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavoprotein"
                     /protein_id="HEX3990901.1"
                     /translation="MALGGMAESERFDVAYLVLSGTTTAARCPGLLRDLVGLGFSRVI
                     AIPTPNAARVIAPRELADIAGVQVVESYFDAAIRPRPPRGVVLFAPCSFNSLNKLAQG
                     IADNLALSVVAEAIGRATPVIVAPSLNQPLLDHPVAQASLRMLPKWKVIIVPPVDEGE
                     GPRLAPSERLIDAVRPFVGHG"
     gene            1543..3174
                     /locus_tag="VHX39_06990"
     CDS             1543..3174
                     /locus_tag="VHX39_06990"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3990902.1"
                     /translation="MDADYVIVGAGSAGCVLANRLTEDANTHVVLIEAGGRDWHPMIH
                     IPAGYMKLLDHPTLTWGYKADAASGLDGREINYPRGRVLGGSSSINGMIYIRGQPEDF
                     DHWAQLGNRGWSWDDVLPFFRKAENWEGDADAVHSKGGPLFTSPTRDQPPLCQAAVEA
                     GQQMGWEYRPDVNDLPPGLGDHIGWVQQTRGGRFRASTARSYLRPVMKRPNLQVVTGA
                     LVHRVVFDGNRATGVEFSRGGAVERANAAGEVILSAGAIGSPHILQLSGVGDPDHLER
                     AGINVHHALRGVGKNFQDHFLVRVSCDVQGIASMNERSRGLGLAGEVLRYVLSGRGLL
                     TYAASLVAASVKVLPESETPDIQALFASASYAPGPTRQLDNKPGMTSGIWQMRPLSRG
                     HVEARTPRPEDQPSINPRYMDDERDRRAVIGGMRIVREWFKAPALARYVVAETLPGRD
                     VQTDDEFIAYARQTGTTVFHASCSCRMGPDALSVVDDQLRVHGLEGLRVIDASVMPAV
                     TSTNTNAPTIMIAEKGAAMVGDARGSVRVAAAAEG"
     gene            complement(3209..4060)
                     /locus_tag="VHX39_06995"
     CDS             complement(3209..4060)
                     /locus_tag="VHX39_06995"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX3990903.1"
                     /translation="MSDTETTRKLQREFWNSEATHRWVTEQARIDRLFAEVTNAALTA
                     AAPKPGESVLDIGCGTGTTVLRLADAVGPGGTVLGVDISEQQLALARRRIEAAGAAQA
                     QVVVDDAATRDFVPGGFDLAFSRFGVMFFADPVAAFSNIRRAMKSGGRLAFAVFRPGS
                     DNPWTTASAAAIRHLVTPPAPPGPEEPGQFSWGDPNRVRRILGGAGFRDVALAPIDPL
                     ITLGSSAAEAAEFAMFIGQGSRLLQGVSDATRQAARVALEAFFKTHEGPNGVSLPGGL
                     WLVSARN"
     gene            4346..5821
                     /gene="zwf"
                     /locus_tag="VHX39_07000"
     CDS             4346..5821
                     /gene="zwf"
                     /locus_tag="VHX39_07000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEX3990904.1"
                     /translation="MAKIIPVDTFDCVVFGATGDLTLRKLLPALYYRCRDGQVPEDSQ
                     IIGAARSDLDDNAYRDRAVAALKDHVDKKDLDPEVMRQFLDRVHYVKVDATAAKADWS
                     ALKALLDPKRVRVFYLATAPDLYGPICRNLGANGLVTEKSRVVLEKPIGHDLESARTI
                     IGRVGEVFTEAQTFRIDHFLGKETVQNLMALRFANTIFERLWSTDVIDHVQITVAETV
                     GLEGRAGYYDRSGAMRDMVQNHLLQLLCLIAMEPPVSLQADRVRDEKLKVLRALRPME
                     PHEVGTLTVRGQYTQGAIDGKPVGGYLTDLGNDEPSETESFVALKAEVQTWRWANVPF
                     YLRTGKRLPQKVSEIVIQFRAQPFSIFPAKAAEIEPNRLIIRLQPEEGMRLEMMTKDP
                     GPGGMRLSPTGLDIRFEKTFHIRFPDAYERLLMDTVRGDATLFMRHDEVEAAWTWVEP
                     ILNAWAGRPDHPRPYPAGSWGPTAAIALIERDGRTWHEDLE"
BASE COUNT         1150 a         1830 c         1847 g         1088 t
ORIGIN      
        1 aaccgcatca accaggcttt gctggtcgac cagctcaatc gggccggatt ttcaacgttt
       61 gctgccagtg acggcaagga agccgtggag gctgtgcggc gcggcggctt cgatgcgatc
      121 ctgatggacg tgcaaatgcc ggaaatcgac ggcattgaag caacgcgccg tattcgcacc
      181 agcgagcggc gttacaggat tccgatcatt ggactgaccg cccatactgg ctcggtggta
      241 cgcaagcgat gcctcgatgc cggcatggac ctggtgctgc acaaacccgt cgacttttcc
      301 tgcctgccgt tgcggctgcg tgaggtcata gccgccgcgc atgtcgccac gactggagaa
      361 gccgatggcg acacagcccg gataatcgcg ggcgggctcg agattgacga tgaatatctg
      421 gagattctcc tggccgaagt tggtgtcaag cgcgcccgta tctgtgtgac ggcgtttctc
      481 gctgatacga ccgtccattt gtcggcgatg gcacgactga tgaacggcaa cgaatgggat
      541 gagctcggac gcctggcaca tagtctgtcc gggatcgccg gcacactcgg tgcaatcaat
      601 ttggccgacg ggctgctgat gctggaagac gcagcgaggc tcgaggggca ggtgcacgtc
      661 gataccgcgc tcaacgacgt gcgttcgacg tgggaacgga cacgcatcat gatcttgcca
      721 aggttcgagg cgctggctgc cgcacgcact cgcgcagcag cgaaccgggc ggcttagcgg
      781 caaatggtgt cacctggcgc ggatattgtt atccgtgacc aacgaacggc cgaaccgcat
      841 cgatcagccg ctcggatggc gcgagccgag gtccctcgcc ctcatcgacc ggcggcacga
      901 tgatcacctt ccatttaggc aacattctca gcgaggcctg cgcaacgggg tggtccagca
      961 gcggttgatt aagcgatggg gccacgatta ccggtgttgc ccgcccgatc gcctccgcga
     1021 ccacggacaa tgcaagatta tcggcgatac cctgcgccag cttgttgagc gaattgaagc
     1081 tgcacggcgc gaacagcacc acgccacgcg gcggtcgcgg acggattgcc gcgtcgaagt
     1141 atgactcgac gacttgcacg cctgcgatgt ccgcaagttc gcgcggcgcg atcacgcggg
     1201 cggcatttgg ggtcgggatc gcaatgacac gcgagaagcc gagcccaacc agatcgcgca
     1261 acagcccagg acagcgggcc gctgtggtcg tgccgcttag cacgaggtag gcgacgtcaa
     1321 aacgttcgct ttctgccatg ccacccaaag ccattgcgtt tgtccttcca aattgccagg
     1381 gctgatcagt ctgcgtaggc atgttgttcc atcgccgatc ggccatgccg tcagagggga
     1441 gcttggcacc gtcgcaccct ctccgttaga tgccaacgcc atcaggccag cgtggtcaac
     1501 gatcggctcg ggcctttaac aatcagtttg ggggaaacgc caatggatgc cgattacgtg
     1561 atcgtcggtg cgggatcggc cggctgcgtc cttgcaaacc gcctgaccga ggacgccaat
     1621 acgcacgttg tgctgattga ggccggaggg cgcgactggc atccaatgat ccacattccc
     1681 gccggttaca tgaagctgct cgaccatccc accctgacct ggggctataa ggcggacgcc
     1741 gcatccggcc tggacggacg tgaaatcaac tacccacgcg gccgggttct cggcggatcg
     1801 agttcgatca acggcatgat ctatatccgc ggccaacccg aggatttcga ccattgggcg
     1861 caactcggca atcgtggttg gtcgtgggac gacgtgctgc cattcttccg gaaggccgag
     1921 aactgggagg gcgatgccga cgcagtccat tccaagggcg gaccgttgtt cacctctcca
     1981 acccgggacc agccgccgct ctgccaggca gccgtcgagg ctgggcagca gatgggatgg
     2041 gagtaccgtc cggatgtgaa cgacctgcca ccgggacttg gcgatcatat cggctgggtg
     2101 cagcagaccc gtggcggccg gttccgcgcc agcacagccc ggtcatatct ccgtccggtg
     2161 atgaaacggc ctaatctcca ggtcgtcact ggcgctttgg tgcaccgcgt ggtgttcgac
     2221 ggcaaccgtg caaccggcgt cgaattctct cgcggcggcg ccgtggagcg ggccaacgcg
     2281 gcgggcgagg tgatcctgtc agccggcgcg atcgggtcgc cgcacattct gcagctttcc
     2341 ggcgtgggcg atcctgacca cctcgagcga gccggcatca acgtgcatca cgcgctgcgc
     2401 ggcgtcggta agaatttcca ggaccacttc ctggtccggg tatcatgcga tgtgcagggc
     2461 atcgcctcga tgaacgagcg gtcgcgtggc ctggggttgg cgggtgaggt actgcgttac
     2521 gtgctgtcag gccgcgggct gctgacctat gccgcatcgc tggtcgccgc ctcggtgaaa
     2581 gtcctgccgg aatctgagac gccggatatc caggcactgt tcgcctccgc cagctatgca
     2641 cccggcccaa ccaggcagct cgataacaag ccgggcatga cgtccggtat ctggcaaatg
     2701 cgcccgctga gccgaggtca cgtcgaagcc cgtacgccca gacctgagga tcagccgtcg
     2761 atcaatcccc gctacatgga cgacgaacgc gaccggcgag cggtgattgg cggcatgcgg
     2821 atcgtccgcg agtggttcaa ggctcctgct ttggctcgct acgtcgtggc ggaaacgctg
     2881 cctgggcgtg atgtgcagac ggatgacgag ttcattgctt atgccagaca aaccggcacg
     2941 accgtgttcc acgcaagctg ctcctgccgg atgggtccgg acgcgctatc agtggtcgac
     3001 gaccagttgc gtgtgcacgg gctggagggg ctgcgggtga tcgatgcctc ggtgatgccg
     3061 gcggtaacct cgacgaacac gaacgcgccg accatcatga tcgccgaaaa aggtgcagcg
     3121 atggtagggg atgcgagagg cagcgtgcgc gtcgccgcgg cagcggaagg ttaaagcctc
     3181 gcgcggaacc gaagcgcccg ggtgccgttc agttccgggc cgaaaccagc cacaggccgc
     3241 ccggcaaact cacaccattt ggcccttcgt gggttttgaa gaatgcctcg agtgcgaccc
     3301 gcgcggcctg ccttgtcgcg tcagacacgc cctgcagaag tcgggaacct tggccaatga
     3361 acatcgcgaa ttcagcggct tcagcagcgc tcgaacccag cgtgatcagc ggatcgatgg
     3421 gcgcaagtgc aacatcccgg aagccggctc cgccgagaat tcgcctgacc cggttcgggt
     3481 caccccaact gaactggccg ggctcctccg gtcccggcgg agccggcggc gtcaccaaat
     3541 ggcgaatcgc ggccgcgctg gcagtcgtcc agggattgtc cgagccaggc cggaagaccg
     3601 caaatgccag gcggccacct gatttcatcg cgcgcctgat gttgctgaag gcggcaacag
     3661 gatcggcgaa gaacatcacg ccaaagcggc tgaacgccag atcgaagccg ccaggcacaa
     3721 agtcgcgggt ggcggcatca tccaccacca cctgggcctg agccgcacca gcggcttcga
     3781 tccttcggcg tgccagagcc aactgctgtt ctgagatatc gacgcccagt accgttcccc
     3841 cgggtccgac cgcgtcggcc aaccgaagca cggttgtacc ggtgccgcag ccgatatcca
     3901 gaacgctttc cccgggcttc ggcgcagcgg ccgtcagcgc agcattggtc acctccgcga
     3961 acagccgatc gatccgtgcc tgttcggtca cccaacggtg cgtcgcctcg ctgttccaga
     4021 attcccgctg gagctttcgt gtcgtttcgg tgtcgctcat tcgttgccct cctgcgatct
     4081 ggtttctgct ttaactccga cctcgcggtc ccgccacgaa tcgcccgcgg aacccgccat
     4141 cataccgtcg acgaagaacc tgtcgatcaa ccctaccact ccatggacga gatcccaggc
     4201 tgcacgtatg cttggccggc tacctaaggc cgttcggcga cagatcaggt tccctgacga
     4261 gtccgctcgc caggccggag gggcaacgcg ggcaggtcgt tagcgacggc aggccgggct
     4321 acccataggg ctcacggcgg acacaatggc aaaaattatc ccggttgaca ccttcgactg
     4381 cgtggtcttc ggcgcgaccg gcgacctgac actgcgtaaa cttctgccgg ccctctacta
     4441 ccggtgccgc gacggccagg tgccggagga ttcccaaatt atcggagccg cccggtcaga
     4501 tttggatgac aacgcgtacc gtgatcgcgc ggttgcggcg ttgaaggatc atgtcgacaa
     4561 aaaggacctc gacccggagg tcatgcgtca gttcctcgat agagtgcatt atgtaaaggt
     4621 cgacgcgact gccgccaaag cggattggag cgcgctcaaa gccttgctcg atcccaagcg
     4681 ggtcagggtg ttttatctgg ccacggcgcc ggacctctac ggtccgatct gccgcaacct
     4741 gggtgccaac ggattggtaa ccgagaagtc ccgcgtcgtg ctggaaaagc cgatcggcca
     4801 tgatctggaa tcggcacgca ccattatcgg ccgcgttggc gaagtcttca ccgaggctca
     4861 gacattccgc atcgatcact tcctcggcaa ggaaaccgtg caaaatctga tggcgttgcg
     4921 ctttgccaac accatcttcg agcggctttg gtcaaccgat gttatcgatc acgtgcaaat
     4981 caccgttgcc gagacggtgg gtcttgaggg ccgtgccggc tattatgacc gctcgggtgc
     5041 gatgcgcgat atggtgcaga accacctgct gcaattgctc tgtctgattg caatggaacc
     5101 gccggtttca ctgcaggccg accgggtgcg cgacgaaaag ctcaaagttc tgcgcgcatt
     5161 gcggccaatg gagccacacg aagttggcac gcttaccgtg cgcggccagt acactcaagg
     5221 tgccatcgac gggaaaccgg ttggtggata cctgaccgac ttaggtaacg atgagcccag
     5281 tgaaacggaa tccttcgttg cgctcaaagc cgaggtgcag acgtggcgtt gggccaatgt
     5341 tccgttttac ctgcgcactg gcaagcgcct gccacaaaaa gtatccgaga tcgtgatcca
     5401 gttccgcgcg caaccgtttt cgatcttccc ggcaaaggcg gcggagattg agcccaaccg
     5461 cctgatcatc cggttgcagc cggaagaagg catgcggctg gagatgatga caaaggatcc
     5521 cggcccaggc ggaatgcgcc tgtcgccgac cggtctggat attcgttttg aaaagacctt
     5581 ccacatacgc ttccccgatg catatgaacg actattgatg gacactgtgc gaggcgatgc
     5641 cacactgttc atgcgccacg acgaagttga ggctgcatgg acctgggttg aaccgatcct
     5701 caacgcctgg gctgggagac ccgatcaccc gcgcccttat cctgccggaa gctggggccc
     5761 gaccgcagca atcgcgctaa tcgagcgaga tggacggacc tggcacgagg atttggaata
     5821 ggcaaaacga tccggcagtt gctttcgcag tgatagtctg ctcaggcgat ttgtttctgc
     5881 ccggtctccg ccgccctcac gatcatatcc agcaa
//
LOCUS       DATAVD010000377         6177 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1897661, whole genome shotgun sequence.
ACCESSION   DATAVD010000377 DATAVD010000000
VERSION     DATAVD010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6177
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1897661"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            666..1127
                     /locus_tag="VHX39_07005"
     CDS             666..1127
                     /locus_tag="VHX39_07005"
                     /inference="COORDINATES: protein motif:HMM:NF021438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2147 domain-containing protein"
                     /protein_id="HEX3990905.1"
                     /translation="MSSYVRTLTMTGCAVIIAIAAVMASATARASRLPVGNWSTANGH
                     GVIAIAQCGDALCGRIVGIDRRPSDPMPTDVNGRSQCGLTIITNERPDAGGTWLGEVT
                     DPRDGGTYQAKLWLDEAGNLRLRGFVGIPLLGATQIWHPFTGHLTADCGLT"
     gene            1158..1805
                     /locus_tag="VHX39_07010"
     CDS             1158..1805
                     /locus_tag="VHX39_07010"
                     /inference="COORDINATES: protein motif:HMM:TIGR03481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990906.1"
                     /translation="MTHDFPLVGRRGFMSSLAIPAVAVAIPWHRAAAATDNDADAIAP
                     VQRLDAALLVAMRASQGTPFEQRYAALAPVVEQTFDLSAVLAGSVGLRWSGLPDDQKA
                     QLLAAFRRYSVASYTASFDHFSGQTFQVLPAVRPVGNGEVIVQSKFISGDGSVTPLNY
                     VMRNGPSGWKAVDVLAGGSISRVAVQRSDFRSLLESGGVSQLVAALQTKVANLAT"
     gene            1809..4040
                     /locus_tag="VHX39_07015"
                     /pseudo
     CDS             1809..4040
                     /locus_tag="VHX39_07015"
                     /inference="COORDINATES: protein motif:HMM:TIGR03480.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
     gene            4102..4488
                     /locus_tag="VHX39_07020"
     CDS             4102..4488
                     /locus_tag="VHX39_07020"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEX3990907.1"
                     /translation="MVLLPLPLNFANIIALPLLLGVGVSFNIYFVMNWRAGRREMLAS
                     ATARAVVFSALTTGSSFGSLALSGHPGTASMGELLLISLGCTLVATLCFVPALLVSMP
                     RGGRASRIHLRNSLAGMMARKDLEAR"
     gene            4588..5586
                     /locus_tag="VHX39_07025"
     CDS             4588..5586
                     /locus_tag="VHX39_07025"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004364 - glutathione transferase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX3990908.1"
                     /translation="MGLLVDGSWIDHRPDDAAGDGRFKRQDTMFRNWITPDGAPGPTG
                     DGGFRAAPGRYHLYVSLACPWAHRTLIFRALKGLEKAVSVSVVHWLMGEQGWTFNDGP
                     GVIPDPVGGARYLHEVYVRSDPTYTGRVTVPVLWDKQRNVIVSNESSEIIRMLNSAFD
                     TVGAAPGDFYPVELRDVIDRFNGRIYDTVNNGVYKAGFATTQAAYEEAVRPLFATLDM
                     LENHLATNRYLSGDRLTEADWRLFTTLVRFDAVYVGHFKCNLRRIVDYPHLWDFAREL
                     YQRPGVAGTTNFSHIKHHYYQSHTSINPTRIVPVGSDLDFLRPHGRKDVPRRTAVD"
     gene            complement(5606..>6177)
                     /locus_tag="VHX39_07030"
     CDS             complement(5606..>6177)
                     /locus_tag="VHX39_07030"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HEX3990909.1"
                     /translation="ATEGGLGDVTFTPFIEWSKLPVWQRQLSIRLAIQATAPTGQYSP
                     NDPINAGSDAWQVSPYLAFTWRVFGRWEISGRSIYDWSGRSGRPPVSLDAANTQAGDQ
                     FAQNLSVSAAITDHWRLGVAGYGLWQLGDTRVDGHAVPKSRQQAIAVGPGLLWSDGHA
                     TVIANVYEEVEAQNRPRGTSIVLRFLYPL"
BASE COUNT         1153 a         1835 c         1875 g         1314 t
ORIGIN      
        1 acgtattagc aaccacccat cccgggccgc ccgctaacgc ccgggatgga accagcgatg
       61 ccgatcttat cacttctgtc cggtagcccc ctgggcggct tgcaggggag agggcattaa
      121 gtcctgcgtc cgctgcttgc agtcggggtc ggcgcccggg ttggcattga aaggcaggct
      181 gcaatgctct ggataagtag acccaccttc ttgtgtcggc tgcttttgcg cctggaccgt
      241 ttgagcgaaa gccggtcctg tgacaagcaa gccggcagcc atcagcgcgg cagaaagtta
      301 cctggtgttc atttggctct ccaggtcggt gttatcgggt tgaggcctta tgattccggc
      361 cacagctata aatatggttt cgcctggcgc aaaaatctct tcaatatgcc tgagttcttc
      421 tgagaacaat ggatcagcgc aggcaaagtt tgttggtgat cggaatgatc ggaagcccgg
      481 ctcggtagta ttgtgcgacc gcgtgaggtg ggattgatgt catccggagg gcaggcctga
      541 cccgaagggg acagaatccg acaattcgtg cggttaatgc ataattgttt tgagatcaaa
      601 cggtataacc aaagtctggc ggtcgaacga cattccggca acgtgaacaa gcggattttt
      661 ggtcgatgtc cagctacgtc agaacgctca cgatgactgg ttgcgcggtc ataatcgcaa
      721 tcgccgcggt catggcctcg gcgacggcca gggccagccg gctcccggtc ggcaattggt
      781 cgacggcgaa tggccatggc gtcatcgcga tcgcccaatg cggtgacgcg ctctgcggca
      841 ggatcgttgg gatcgatcgt aggcccagcg acccgatgcc cacggatgtg aacgggcgtt
      901 cgcaatgcgg acttaccatt atcacgaatg agaggccgga tgcgggcggc acctggctcg
      961 gcgaagtcac cgatccgcgt gacggtggca cgtatcaggc gaagctgtgg ctagatgaag
     1021 ccggtaacct gcgattgcga ggcttcgtcg gcatcccact gctgggcgcc acccagatct
     1081 ggcatccgtt caccggacat ctaaccgccg attgcggtct gacatgaata tcgtatccca
     1141 tggaatggag agcagcgatg acgcacgatt tccccttggt tggacgccgc ggttttatgt
     1201 catcgctcgc gattccggcg gtcgccgtag ctattccctg gcatcgggcc gccgccgcga
     1261 ctgacaacga cgcggatgcc atcgcgcccg tacagcggct cgatgccgcg ttgcttgtag
     1321 cgatgagggc gagccaaggc acgccgttcg agcaacgata tgcagcactg gcaccggttg
     1381 tcgaacaaac cttcgatttg agcgctgtgc tggcgggctc ggttggcctg cgatggtccg
     1441 ggctgccgga cgatcagaaa gcccagttgc ttgccgcgtt ccggcgttac tcggtggcca
     1501 gttatactgc gagtttcgac catttcagtg gccagacatt ccaggttttg cccgcggtgc
     1561 gcccagttgg aaatggcgag gtaatcgtgc agagcaaatt catttcaggc gatggttcgg
     1621 tcacaccact caactatgtg atgcggaatg gcccgtccgg ctggaaggca gtcgacgttc
     1681 tggccggcgg ttcaatcagc cgtgtcgccg tgcaacgctc ggactttcga tccctgctcg
     1741 agagtggggg tgtgtcgcaa ctggtggccg ccctacaaac caaagtcgcc aatctggcga
     1801 cctgacccat gacaaagcac acttcctggg cttcactcct gaccggcggc ctggcgagcc
     1861 ttgccgacca atgccgccgg cacgcgttgt gggtggtgat cgccggggtt gcgctgaccg
     1921 gtgcatctgg cgttttcgcc agtcgccacc tcggaattaa cactgacacc gaccagatgt
     1981 tcgacgccag tctgccatgg cgtcagcacg cgatggcgct ggatcgtgcc tttccacagt
     2041 ttcaaggctt gctggtcgca gtcatcgacg ccgatgtgcc ggaggaggcg gatgccaccg
     2101 cgcgcaacct ggcacaggct ctttcgagcg accacgctga cttcagcatg gttcgccgac
     2161 cggacgcctc gccatatctc cgccacgaag ggttgctgct gctttccacg acgcaactca
     2221 ccgatctgct ggatcggaca attgatgcac aaccatttat tggcaaactc gtggctgacc
     2281 ccaccgcgcg aggcttgttt ggcgctcttg aactgcttgg ccagggggtg acgcatgggg
     2341 atgcggatct caggccatat gccggtgaat tgcaggcctt ccacgaggtt atggcagctg
     2401 cactcaacgg ccgcccggaa ccgctgtcat ggcaaaaact gttgagtgga aaactgggtg
     2461 accttggcgg caagtatgaa ttcgttctgg caaagccgag gttggatttc agttctctgc
     2521 agccaggcgc caaggcaacg gaagcgatac gttcgagtgc ggcaaagctc gaattcgtga
     2581 aaagcggcac cgctcatgtg cgtatcaccg ggcctgtcgc attggccgac gcccagttcg
     2641 cgacagtcgc tcaaggggcg gtcgtcgggc tgatcggcag cgttgcgctg atcacgattt
     2701 ggctgatttt ggcgttacgc acctggcgac tcattttgcc cgttctgggt acgctggtgt
     2761 tggggctgat gctcacgctg atgtttgcgg cggcggcgat cggcacgctc aacctggtgt
     2821 cagtcggatt tggtgtgctg ttcgtcggca tcgcggtaga cttcgccatt cagttctccg
     2881 tgcgataccg cgaggcgcgt cacgatctca acgattcggc tgctgcgatc aggcaaaccg
     2941 cgcgacgtgc cggcggagcg atcctcgtcg cagcgctggc aaccgcggcg gggtttctcg
     3001 cttttgtgcc gaccgctttc agtggcgtcg cggagttggg cctgatcgcc ggcgtcggca
     3061 tgttgatcgc tttcctgtgc acgctgactt ttctccccgc tgcaattacc gtgtgcaagc
     3121 ctgccggtga aaaggtcgag atcggctttg cctggggagc cagggtcgat gggctgataa
     3181 cgcgttcgcg ccgtgcgatt ctggccgggt tcgttgcctt ggcggtactc gctctggcgc
     3241 tcgccccaag cttgcagttc gactccgacc cgctggacac acagagtccc aacaccgaag
     3301 cgatgcgtac gctgcgggac ctgatgaact cgccgcttac caatccgtac agcatcgaca
     3361 ttctgaccgg gaacgtcggc caggcgcagg cgcttgcatc gcgactgaaa gaactgccca
     3421 ccgtatcgag cgtcctcaca atcgatagct tcgttccaca ggatcagaca caaaaactcg
     3481 ctttggtagc cgacgcggcg aacctccttg ctcccacgct gctggcacca acttccgtgt
     3541 caccggtgac cgctgcggat atccgtactg cggcacattc cgcgcttgac gagatcaatc
     3601 ctgcgcttgt gttgttgccg cccactcatc ctttggcggc gattgctgag gacctgcgac
     3661 ggctcgccgt cagctcggat cagaccgtga tgtcaaccaa caccgcactg acgcgtttcc
     3721 tgccggagca actcgaccgg ctccgcacag cgctcgatgc caaggcagtc gacctctcgt
     3781 cagtgcctcc ggatatcgca cgggactggg tgctcgctga tggacgggca cgagtacagg
     3841 tactacctca accggcatat cgcaccagtc agggcctgcg tgagtttgtt gaccaggtga
     3901 cacacgtggc cccggacgcc ggcggtactg ccgtaacgat cgaagcaacc agtgccacaa
     3961 tcatcggtgc attccgctct gcagcgatgt tggctgtggt agcgatcgcg gtgatcctgc
     4021 ttgtcgcatt gcgccgtccc cgcgatgcgg ccctcgttct ggcgccactg ctgctttcgg
     4081 cggcactcac agtttttggt catggtactg ctgccgttgc cgctgaattt cgccaacatc
     4141 attgcactgc cactgctgct tggcgttggt gtttcgttca acatttactt cgtgatgaac
     4201 tggcgcgccg gacgccggga aatgctggcc tcggccactg cgcgcgcggt agtgttttcc
     4261 gcgctgacca cgggcagctc attcggttcg ctggcgttat cagggcatcc cggcaccgcg
     4321 tcgatgggtg aactgctgtt gatcagtctg ggatgcacat tggtggcaac gctatgcttt
     4381 gttccagctc tgctggtatc gatgccccga ggaggcaggg cttcccgaat tcacttgcgc
     4441 aattccctgg caggcatgat ggcaaggaaa gatctggagg cccggtaaca actcgatctg
     4501 gttgagtgct tgtagacacc ttcctgatga gccatttaaa tctgcaggac gccgcggcct
     4561 cacccagcca gcttcggagg taacgacatg ggtctactcg tcgatggaag ctggattgat
     4621 catcgcccgg acgatgccgc aggtgatggt cgcttcaagc gtcaggacac catgttccgg
     4681 aactggatca ctccggacgg ggcgccagga ccaaccggcg acggcggctt cagggcagcg
     4741 cctgggcgct atcatctcta cgtttcactt gcctgtccct gggcccacag aaccttgatc
     4801 tttcgcgcgc tgaaagggct tgaaaaggca gtctccgttt cagtcgtgca ttggttgatg
     4861 ggagaacagg ggtggacatt caacgatggg ccaggagtta ttccggatcc cgtcggtggc
     4921 gcgcgctatc tccatgaggt ctatgtccgg tcggatccga cctataccgg ccgggttacg
     4981 gtaccggtgc tgtgggacaa gcagcgcaac gtgatcgtat cgaacgagtc atccgaaatc
     5041 attcggatgc tgaactcagc ctttgacacg gtcggggcgg ctcctggcga tttttatccc
     5101 gtcgaactgc gagacgtcat cgatcgcttc aacgggcgta tctatgacac cgtcaacaat
     5161 ggcgtgtaca aagccggctt cgcgacgaca caagcggcct atgaggaagc ggttcgcccg
     5221 ctgttcgcga ccctcgacat gctggagaat cacctcgcga caaatcgata cctttctggc
     5281 gatcgtctga ccgaggcgga ttggcggctc ttcacgacat tggtgcgatt cgacgcggtc
     5341 tacgtcgggc acttcaaatg caatttaagg cggatcgtgg attacccaca tctctgggat
     5401 ttcgcccgcg aactttatca gcgtccgggt gtcgccggaa caacgaattt cagtcatatc
     5461 aagcaccact attaccagag ccacacgtcg attaatccaa cgcgaattgt gccggtcggg
     5521 tcggacctcg atttcctgcg tccacacggc cgcaaagatg taccgcggcg aaccgcggtc
     5581 gactgattcc aacgcaccgg aaccctcaaa gcggatagag aaacctcaac acaatgcttg
     5641 tgcccctcgg ccggttctgc gcctcgacct cttcgtaaac gttggcgatg actgtcgcat
     5701 gcccatccga ccacagcaga cctgggccga cggcgatcgc ttgttggcgt gacttcggaa
     5761 cagcatggcc atccacccgc gtgtcgccga gttgccaaag gccgtagccg gccacgccaa
     5821 gccgccaatg gtccgtaatg gccgccgaca ctgaaagatt ctgtgcgaat tgatcgccgg
     5881 cctgagtgtt ggccgcgtcg agcgaaaccg gcggacggcc ggacctgccg ctccagtcgt
     5941 agatactccg gccgctgatc tcccatcggc cgaacacacg ccaggtgaag gcgagatagg
     6001 gcgaaacctg ccaggcgtcc gagcccgcgt tgatcggatc gtttggggaa tactgtcccg
     6061 tgggcgccgt ggcctggatg gcgagccgga tcgatagctg ccgttgccaa actggcaact
     6121 ttgaccactc gatgaatggg gtgaaggtca cgtcgcccag acccccctcg gtggcct
//
LOCUS       DATAVD010000378         2118 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1524815, whole genome shotgun sequence.
ACCESSION   DATAVD010000378 DATAVD010000000
VERSION     DATAVD010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1524815"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..482)
                     /gene="atpH"
                     /locus_tag="VHX39_07035"
     CDS             complement(<1..482)
                     /gene="atpH"
                     /locus_tag="VHX39_07035"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit delta"
                     /protein_id="HEX3990910.1"
                     /translation="MASEATTIAKGGGLADRYAAALYAHADDTGALDAVVSEMESLGL
                     LIDNSGDFRRLIESPLIDVTTGTRAALAVLQQEGFGKAVRDFVGVVSANRRLRALREI
                     VTAFAALVADRRGIITAHVTSAQPLNDLQRQQLRARLIEAGYGNVNILEQIQPDLLGG
                     L"
     gene            812..1249
                     /locus_tag="VHX39_07040"
     CDS             812..1249
                     /locus_tag="VHX39_07040"
                     /inference="COORDINATES: protein motif:HMM:TIGR04222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04222 domain-containing membrane protein"
                     /protein_id="HEX3990911.1"
                     /translation="MPLNPLDWTAQPFLTLYVAVAAAAVLLVLVLRRSAGTGPDPMGS
                     ANADPVMLAWLTGGPRRAADTVLVAFLESGVANQFGLRGQLSVDMAQGTVPSGLRRFG
                     EPANNPRSVTAFRRAIQPGLEEVRDNLVQRGLAPAREVIERWW"
     gene            1507..1848
                     /locus_tag="VHX39_07045"
     CDS             1507..1848
                     /locus_tag="VHX39_07045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990912.1"
                     /translation="METRLIDFAQARVNRIADAIDGLGEHIKATNLHVERLHREVGEL
                     RSEVGSLRSEMDRRFSEVDRRFDHLHHELRDARSEVILQANQILNAQQQATRAMLRLD
                     DIERPPDEPVS"
     gene            complement(1873..>2118)
                     /locus_tag="VHX39_07050"
     CDS             complement(1873..>2118)
                     /locus_tag="VHX39_07050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990913.1"
                     /translation="SHEWANREQTLRSYELFARWVMPRFQGSADSTWDSREWCSENRA
                     GIFGPAMGALKKAFVDAGQEAPDMMRMRLHTGKTEVD"
BASE COUNT          387 a          663 c          668 g          400 t
ORIGIN      
        1 aggccgccaa gcaaatccgg ttggatctgt tccaatatgt tcacgttgcc gtagccggcc
       61 tcgatcagcc gggcgcgcaa ttgttgccgc tgtaaatcgt tcagcggttg cgccgacgtc
      121 acatgtgcgg tgatgatgcc gcggcgatcg gcgaccagtg ccgcaaacgc cgttacgatc
      181 tctcgcaacg cccgcagccg gcggttggcg gagacgacgc cgacgaaatc gcgcaccgct
      241 ttgccgaagc cttcctgctg caataccgca agcgcggctc ttgtgccggt tgtgacgtcg
      301 atcagcggag attcgatcag gcgtcggaag tccccactgt tgtcgatcaa caagcccagt
      361 gattccattt ccgagacgac ggcgtcgagt gcgcccgtat catcggcatg cgcgtagagc
      421 gctgcggcat agcggtcggc caggccgccg cctttggcga tcgtggtagc ttcagacgcc
      481 acgtgcgttt ccatctttct ggcctcgcgc gcaccgtaca agcgtgggca cgcgggcatg
      541 accgggcaaa agagccggcc cgaaccggcg gcgaccctct agcaggggtt ccctggccac
      601 gcaacacacg gaaacatgat gagcgccgga atgcgggcgg attcggttat tccgaacgtc
      661 ggttcttcgg tctgccgccg gagcagttct ggcaggcggc ccacatccgc ttcgccgccc
      721 gcccgcgatt tcggaccgtc gacgtgtttc gttggctcgt cgcgccgcgg ccctcgacaa
      781 tctggctcaa gatcagaacc ggtatccaat catgccgctg aaccccctgg actggaccgc
      841 gcaacccttt ctgacgcttt acgttgcggt cgcggccgcc gcggtcttgc tggtcctggt
      901 gctgcgccgg tccgccggga ccgggcctga cccgatggga tcggcgaatg cagaccctgt
      961 catgctcgcg tggctgacag gcgggccacg acgggctgcc gatacggtgc tggtggcatt
     1021 tctggagagc ggtgttgcca atcaatttgg gctgaggggc cagctttcgg tcgatatggc
     1081 gcaaggcacc gtgccatcgg gcctccgccg atttggtgag ccggccaaca acccaaggtc
     1141 ggtgacagcg ttccgccgcg caatccaacc cggactggaa gaggtccgcg acaacctcgt
     1201 tcaacgaggt cttgcgccag cgcgggaggt gatcgagcgg tggtggtgac ggcggcggtg
     1261 gaggcggttg aggcagcggc agcagtggct gagtgcacgt ggaggtcacg gttcgatgaa
     1321 ctgaatggca agagggttcg gaccgccggt ctgccagcaa tgtattcgaa tcttgtcggt
     1381 gggttattga gacgcacccg catggcacgg ctcgcaggac ggagtcgcgg acggctacat
     1441 gccatggtga tccaggttcc catcgcaccg accgagccca catgctaaat caggtgaatg
     1501 ggtccgttgg aaacacgtct tatcgatttt gcacaggctc gggttaaccg tatcgcggac
     1561 gcgatcgacg gccttggtga gcatatcaag gccactaacc ttcacgtcga acgattgcac
     1621 cgcgaagttg gcgagttgcg cagcgaggtc ggctcgctcc ggtccgaaat ggaccggcgc
     1681 ttctcagaag tggacaggcg cttcgatcac ttacaccacg agttacgcga cgcgcgcagc
     1741 gaagtcatcc tccaggccaa tcaaatcctc aacgcacagc agcaagcgac tcgcgcgatg
     1801 ctccgactgg atgacatcga acgtccgccg gatgagccag tttcctgacg catccgggga
     1861 cgcagcaagg ggctaatcga cctcggtctt accggtgtgc agccgcatcc gcatcatatc
     1921 cggtgcttcc tggccggcat cgacgaacgc ttttttcaat gcgcccatcg ccggaccaaa
     1981 gatccctgcc cggttctcgc tgcaccattc ccgagaatcc caggtcgagt cggcgctgcc
     2041 ctggaaccgc ggcatgaccc agcgggcaaa caactcgtaa ctgcgcaacg tttgctcgcg
     2101 attggcccat tcgtggct
//
LOCUS       DATAVD010000379         4141 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2827443, whole genome shotgun sequence.
ACCESSION   DATAVD010000379 DATAVD010000000
VERSION     DATAVD010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4141
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2827443"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(17..1171)
                     /locus_tag="VHX39_07055"
                     /pseudo
     CDS             complement(17..1171)
                     /locus_tag="VHX39_07055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611774.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(1609..2043)
                     /locus_tag="VHX39_07060"
     CDS             complement(1609..2043)
                     /locus_tag="VHX39_07060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010400577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3990914.1"
                     /translation="MERAFLSIGDLARATDTKIETVRYYERVGLLPTPARTGGNYRMY
                     SQENLGRLSFIRRSRDLGFSLDQVRELLRLADQRDQSCEEVDVIAREHLTEVERKIAD
                     LTALGDELRHILGQCGHGTVAECRIIEALSPVPAHRDNNDPP"
     gene            2110..2754
                     /locus_tag="VHX39_07065"
     CDS             2110..2754
                     /locus_tag="VHX39_07065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007284432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEX3990915.1"
                     /translation="MATGCCNQCPTPPTQDPRWRRVLWVALCVNAGFFAAEIVAGAAA
                     GSSALQADAPDFFGDAANYAISLGVVGMALTWRSRAAVAKGGTMTMFAVWVLANTAWH
                     AFHGTLPQAEVMGVVGIAALIANGGVALMLYRFRTSDANMRAVWICSRNDAIGNAVVV
                     LAALGVFGTGTGWPDVIVATIMGGLGLWGGRQIVSQAYGELRAETTPRRFMTVE"
     gene            3631..4050
                     /locus_tag="VHX39_07070"
     CDS             3631..4050
                     /locus_tag="VHX39_07070"
                     /inference="COORDINATES: protein motif:HMM:NF021873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2442 domain-containing protein"
                     /protein_id="HEX3990916.1"
                     /translation="MSQEVFSRYDSVGYLKTEEDIAAYLEAAAVEGGDDPAFLARSLS
                     VVARARATVPWRVRDVTALPGYRLAVTFLDGTAGTVDMSEMIKSEAAGVFATLRDPEL
                     FAAVTVELGAVTWPNGLDLAPDAMHEEILAHGEWRLL"
BASE COUNT          798 a         1176 c         1237 g          930 t
ORIGIN      
        1 agttaatccg gtggttttag gccgtggctg atttgaacga ggccgcgttg ttggacacca
       61 gttgcggtgc gggccatatc aatacctctg gtgctggcgg cctgtaaccg agggatgagt
      121 ggggccggat cgtgttattg ccggcgccag gcttcgatca aaatcctggc ttcctgcaaa
      181 gtgtagaaga tttctccgtt gaggaattcg tcgcgcaggc gtgcattgaa gctctcgata
      241 taaccgttct cccacggact tcctggcgtg atataggcgg tctgggcgcc gacggcggcg
      301 atccaagcct gcactgcttt agcgatgaac tcggggccgt tatcagagcg aatatgctcc
      361 ggcacaccgc gcaggatgaa caggtcgaag aggacatcga tgacatcggt cgaattcaac
      421 ctccgggcta ctcggatcgc cagcgcctcg cgggtgaatt catcgacgat gttcaacatc
      481 cggatcttgc ggccgtcatg cgtgcgatcc tcgacaaagt cataggacca cacatggttg
      541 gggcgctcag cacggagccg gatgcacgaa gcctcgttca gccaaagccg tgccctcttc
      601 ggctgccgtt gcggaacctt aagcccctct ctgtgccaaa tacgcgctac acgtttcttg
      661 ttaacggccc agcctgcctg atgcagtagt gctgtgatgc ggcgatagcc gtagcggcca
      721 tactgccgtg ccaattcgat gatgtccgct gtcaatgtgg cttcgtcatc ggcggtcttg
      781 ggaaccaaac gctgtgtggt gcgatgctgt ccgattacgc ggcatgcaaa ccgctccgac
      841 acgccgagcg tctcaacaac atgttggatg ccagcccggc ggcgtgccgg gcttaaaact
      901 ttcccgaagc cacttccttc aaaaccagct tctccagcgt caaatccgac accgcacgcc
      961 gcagtcgggc gttctctgcc tccaactcct tcatgcgctt cacctgggcg accttgagcc
     1021 cgccatactc ctggcgccac cggtaatacg tcgcgtccgt cacaccagtc gaccggatcg
     1081 catcaacagc cgacttgccc tgagaggtca aaacctcgac ctggcgaagc ttcgcaatga
     1141 tctcctcagg cttgtaaatc ttccgcggca tcaaaaacct ccaccaaaaa actacatcaa
     1201 tggtggagca gttctagggg gctggaccac tcaaagctgt ctatcccgcc gtttggggat
     1261 ttctccagat cgtcacgggc tcgctcagcg atcgcatcgg ccggcgcacc ttgatcgccg
     1321 caggtatgtg ggtgcaggcg gccgggctcg ttctcacggc agtgactggg accttcacct
     1381 ggtggctgct tggcgccgtt ctgatgggcg ccgggaccgc catggtttat cctaccttgc
     1441 ttgcagcagt atcagatact gcgccgcctg cctggcgcgc gcggtctttc cgtttatcgg
     1501 ttctggcgcg accttggcta tgcgatcggc gccctcgcgg caggtctgct tgcggatcag
     1561 tttgggctca cgatgccgat catcgcggtt ggcctgctta ccgccttttc agggaggatc
     1621 attattgtcg cgatgcgccg ggaccggcga tagcgcctcg atgatccggc attcggcgac
     1681 ggtgccatgc ccgcactggc caaggatatg gcgcagctca tcaccaagag ccgtgaggtc
     1741 ggcgatctta cgctcaactt cggtcaagtg ttcccgtgcg ataacatcaa cctcctcgca
     1801 cgactggtcc cgctgatccg ccagccgcag cagctcgcgt acttggtcca gcgagaagcc
     1861 gaggtcacga gaacgtcgaa tgaaacttaa tcgccccaaa ttttcctggc tgtacatgcg
     1921 ataattaccc cctgtacgcg ccggcgttgg aagcagtccg acgcgctcat agtaccgaac
     1981 ggtctcaatt ttggtgtccg ttgctcgggc cagatcgccg atactgagaa aagcccgttc
     2041 catgatgttg accctgtagt tgctacaggg tctatatcgg gcacctgtcc cgtctcgtcg
     2101 aggtccatca tggctacagg ttgctgcaac caatgcccca cgccccctac tcaggatcca
     2161 cgctggcgcc gcgtgctgtg ggtggcgcta tgtgtcaatg ccggtttctt cgcggccgag
     2221 atcgttgccg gcgccgccgc cggttcgtcg gcgctgcaag ccgatgcgcc cgatttcttc
     2281 ggtgatgccg ccaactacgc catcagcctc ggcgtggtcg gcatggcgct gacctggcgc
     2341 agccgggccg ccgtcgccaa aggcggcacc atgaccatgt tcgcggtgtg ggtgctggcc
     2401 aacaccgcat ggcacgcctt tcatggcacg ctgccgcagg ccgaggtcat gggcgtcgtg
     2461 ggcatcgcgg ctttgatcgc caatgggggc gtggcactaa tgctctatcg attccgcacc
     2521 agcgatgcga atatgcgagc ggtctggatt tgctcgcgca atgacgcgat cggcaatgct
     2581 gtggtggtgc tggccgccct gggcgtcttc ggtaccggga caggctggcc cgatgtaatc
     2641 gtcgccacga tcatgggggg gcttggcctc tggggcggac ggcagatcgt cagtcaggcg
     2701 tacggtgaat tgcgcgccga gaccacgccg cgccgtttca tgacggttga ataattgcct
     2761 tagctaacca ccgcgtctgg tgcggcttgg tgcggcgatc gacgatgaca tgctgcacca
     2821 catctccgga tagctgaggg agcgtttcgg catcagtcat acgttccgga aaatccgaaa
     2881 gtcttgagtt ttgaacaagc ttggcaacta gaccttgatg tagtgcgtga tgttggaagt
     2941 actcgccaat cagacaggac cttgatagct ttcacttatg tggacagcga tcataactgc
     3001 gtttgtaacg ataattgttt cagcaggcac cttcttcttg accaagcaca aagaacgaga
     3061 agcgatctgg cgcgccaaga agctgtcgta ttatgaagag ttttttggtg ctgcgagcgg
     3121 tatcgtgggg attgcaacgc cacctgaggc gaaagttagg ttcgctacag cagtaaataa
     3181 cctccatctg ataggatcac tagcggtaat acacgctctt catgcgttca cggatgagat
     3241 ttcatgcgtt cacggatgag atttcggtgt caaacagcgc ggcaatgacg atggaaaaac
     3301 atgacgaatt atggtctcgt ctggtttggg aaattcgtgt cgatctgaac gatccacccg
     3361 gcagaaatcc aacgaccttt aaggctcggc tttgggcttc gggaaccggt cgaaactctt
     3421 gaactttgca ccagctaggc ggttatggga cccggcacag gaatggggcg gcccttgggc
     3481 gtggtgctgt tcggcccaga aaattcgcaa tttatacggc gatcaggctg ctgcagtccg
     3541 gtatatggta tgctcaatgt tgctgatagg atgaataagg aagatcgtgt tcaagctacg
     3601 agttcggccg ggtagtagaa ggggtgagat atgagccagg aagttttcag ccgctacgat
     3661 tctgtgggct atctcaaaac tgaagaggac attgcggcct accttgaggc cgccgccgta
     3721 gaaggaggag atgatcctgc ttttctggcc cgttcactta gtgttgtggc tcgcgcccgg
     3781 gccactgtgc cgtggcgcgt tcgtgacgta accgcgttgc cgggttaccg gctggctgtg
     3841 acgtttcttg atggcacggc cggcaccgtc gatatgtcgg agatgattaa gtcggaggcg
     3901 gcgggcgtgt tcgcgacgct gcgggacccc gagctgttcg cggcggtgac ggtcgagctc
     3961 ggcgctgtga cgtggccgaa tggtctagac ctggcccccg acgccatgca cgaagaaatc
     4021 ctcgcccatg gcgaatggcg gcttctgtaa ccttcaatag cggaaacaaa ccaacacgcc
     4081 taacgccaga ggtgtttagg ggtttgagct ttgggtggcc ttttgttcgc ttttgatctg
     4141 a
//
LOCUS       DATAVD010000380         2286 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2082251, whole genome shotgun sequence.
ACCESSION   DATAVD010000380 DATAVD010000000
VERSION     DATAVD010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2082251"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..915
                     /locus_tag="VHX39_07075"
     CDS             136..915
                     /locus_tag="VHX39_07075"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX3990917.1"
                     /translation="MAQRPRCGEMAIRPGGGRSGGYALIARMLRLGLVIGLTTVFDPF
                     ASAQVTDRPPDTMEARLRACAACHGDQGQGTDNDYFPRLAGKPAGYLLNQLVAFRDAR
                     RHYTPMNYLLEYLPDSYLHEMADYLSALRPPAQPPAIADVSPAILARGQTIVAKGDPV
                     RGVPACSGCHGPTLTGMQPAIPGLVGLHASYISAQLGAFRYGTRTAAAPDCMQLVAAS
                     LTESDVTAVAAWLASRPVPADPSAVPQGSLAMPMACGSEPK"
     gene            932..2182
                     /locus_tag="VHX39_07080"
     CDS             932..2182
                     /locus_tag="VHX39_07080"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX3990918.1"
                     /translation="MRNCHTLLIAVLFAGLLSIGGSRLVFGQDAALLAKGEYLARAGD
                     CIACHTNPGGALFAGGLAMLTPFGTLYSSNITPDRDTGIGTWTADQFYAALHTGRFPD
                     GGLMYPAMPYGSYTKVTRADSDAIYAYLRSAQPVHQPNRPHDLRFPYDNRSLILGWRT
                     LFFNEGEFQPDKAKSAEWNRGAYLVEGLGHCGMCHTPINALGGNSQSQAFQGGLIPMQ
                     NWYAPSLTSNKEAGLGDWSIPEIVELLRSGTSHRAAVYGPMAEVVFDSTQYLNDTDVR
                     AMAVYLKGLAEGTPPATEITAIPTPESSLLLHFGQTVYEARCAICHASDGSGMPPAYP
                     PLAGNPSIQMQSAVNPIRMVLNGGYPPGTQGNPKPYGMPPFAQSLSDDQVAAVVTYIR
                     AAWGNRGTPVSARDANQLRTSPLD"
BASE COUNT          401 a          775 c          685 g          425 t
ORIGIN      
        1 gcgaccccgt caccgcaccc cgattgaacg attatgctcg gtcaaagcgg cggactcatt
       61 aaatcagtgc tttttcgaaa gcgtcgtcgt cggtcccgtg ccaacatccg gcgacagtga
      121 gggggagttt gccgagtggc gcaacgccca cgatgtggcg agatggcaat ccggccgggc
      181 ggcggtcgga gtggaggcta cgcccttatc gcacgcatgc tccggttggg cctggtcatc
      241 ggcctgacaa ccgttttcga tcctttcgcg tccgcgcagg tcacggatcg tccgcctgat
      301 acgatggagg cgcgcctccg ggcctgtgcg gcttgccacg gcgaccaggg tcagggcacc
      361 gacaacgact atttcccgcg tctcgcgggc aaacccgccg gctacctgtt gaaccaactg
      421 gtcgcctttc gcgacgccag gcgccactac acgccgatga actatttgct cgaatacctg
      481 cctgactcgt atttgcatga gatggcggat tatctctcgg cacttcgccc accggcccag
      541 ccgccggcga tcgctgatgt aagtcccgca atactggcgc gcggacagac gatcgtggca
      601 aaaggcgacc cggtgcgagg cgtccccgct tgctcaggtt gccacggccc cacactcacc
      661 ggaatgcaac ctgccattcc cggtcttgtc ggcctccatg ccagttacat cagtgcgcaa
      721 ctgggcgcat tccgctacgg cacacgaacc gctgccgcgc ctgattgcat gcagttggtt
      781 gccgccagcc tgaccgagag cgacgtgacc gccgtcgccg cctggctcgc gtcccgcccg
      841 gtaccagccg acccatcggc cgttccgcaa ggttcgttgg caatgccgat ggcgtgcggc
      901 agcgaaccga aatgagagcg gggtgattgt catgcgcaac tgccacaccc tgttgatcgc
      961 cgtcctgttt gccggcctac tttcgattgg cgggtctcgc ctggtgttcg gtcaggatgc
     1021 ggcgctgctt gccaagggcg aatacctcgc ccgcgccggc gactgcattg cctgccacac
     1081 caatcccggc ggagcattgt ttgccggcgg gcttgccatg ctgacgccgt ttggcacgct
     1141 gtattcgtcc aacatcacgc ccgaccgcga caccggcatc ggcacttgga ccgcagatca
     1201 gttctacgcc gccttgcata ccggacgctt cccggatggc gggctgatgt acccggccat
     1261 gccctatggc tcatacacca aggtcacgcg cgccgactct gatgcgattt acgcgtatct
     1321 tcgttcggcc cagccggtgc accagccgaa ccgtccgcac gacctgcgtt tcccttatga
     1381 caaccgctcg ctcatcctgg gttggcgcac gctgttcttc aacgaaggag agtttcagcc
     1441 tgacaaggcg aagtcagccg agtggaatcg cggcgcctac ctcgtcgaag gccttggcca
     1501 ttgcgggatg tgtcacacgc caatcaacgc cttgggcggc aactcgcagt cgcaggcgtt
     1561 ccagggcggc ctgatcccga tgcagaactg gtacgcgccg tcgctgacct ccaacaaaga
     1621 agccggcctt ggcgactgga gcatcccaga gatcgtggaa cttctgcgct ccgggacgtc
     1681 gcaccgcgcc gccgtctatg gaccgatggc cgaagtggtg ttcgacagca cgcaatatct
     1741 gaacgacacc gatgtccgcg ccatggcggt gtatctgaaa ggcctcgccg agggcacgcc
     1801 gcctgcgacg gaaatcaccg ccattccgac gccggagagc agtctgctgc tgcatttcgg
     1861 ccagaccgtc tacgaggcgc gttgcgcgat ctgtcatgcg agcgatggca gcggcatgcc
     1921 gccggcgtat ccgccgctgg ccggcaatcc atccattcag atgcaatctg cggtgaaccc
     1981 gatccgcatg gtgctgaacg gcggttaccc gccgggcacg caaggcaacc cgaagcccta
     2041 tggcatgccg cccttcgcgc aaagcctgtc cgatgaccag gtggccgcgg tcgtcactta
     2101 catccgcgct gcctggggca accgcggcac cccggtgtcc gctcgcgatg cgaaccaact
     2161 gcgtacctcc cctctggatt gatgtttcga tgttgaactc ggacccaatc gaaaccggcg
     2221 taatcgaaac cggcccaatt gaaaccggcc ctcgggacgc gcccgtgcgg ccgatgtcta
     2281 gcgggg
//
LOCUS       DATAVD010000381         6584 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_407664, whole genome shotgun sequence.
ACCESSION   DATAVD010000381 DATAVD010000000
VERSION     DATAVD010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6584
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407664"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..240
                     /locus_tag="VHX39_07085"
     CDS             <1..240
                     /locus_tag="VHX39_07085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0019685 - photosynthesis, dark reaction
                     [Evidence IEA];
                     GO_process: GO:0030494 - bacteriochlorophyll biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-vinyl bacteriochlorophyllide hydratase"
                     /protein_id="HEX3990919.1"
                     /translation="FGRYLFADAFFWEDVFSMLVLALHTAYLAALVTGAFDARSQMAI
                     ALAAYAAYIVNATQFVLKLRAARLQGSLTPMQASA"
     gene            237..1508
                     /locus_tag="VHX39_07090"
     CDS             237..1508
                     /locus_tag="VHX39_07090"
                     /EC_number="1.3.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016730 - oxidoreductase activity, acting
                     on iron-sulfur proteins as donors [Evidence IEA];
                     GO_process: GO:0015995 - chlorophyll biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin:protochlorophyllide reductase
                     (ATP-dependent) subunit N"
                     /protein_id="HEX3990920.1"
                     /translation="MSAILSACSAPPAELPAIRERGQREVFCGLTSIVWLHRKIQDAF
                     FLVVGSRTCAHLIQSAAGVMIFAEPRFATAIIEERDLAGMADANDELDAVVTQLLQRR
                     PDIKLLFLVGSCPSEVIKLDLSRAALRLGQQFGPDVRVLNYSGSGIETTFTQGEDACL
                     AALVPVLPATEAHELLVVGALADVVEDQFARLFAAMGIYAVRFLPPRRANDLPPVGPR
                     TRFLLAQPFLADTARALEERGATRIAAPFPLGVEGTTLWLQAAASAFAVPTASFRSAT
                     DIARERGRRAVTRYRSELAGKRIFLFPDSQLEIPLARFLARELSMQVIEAGTPFLHRQ
                     HLAEELALLPDSVPVSEGQDVDRQLERCRAAKPDLVVCGLGLANPLEAEGLTTKWSIE
                     LLFTPVQGYEQAGDLAELFARPLVRRMRLAV"
     gene            1513..3012
                     /gene="bchB"
                     /locus_tag="VHX39_07095"
     CDS             1513..3012
                     /gene="bchB"
                     /locus_tag="VHX39_07095"
                     /EC_number="1.3.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0015995 - chlorophyll biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin:protochlorophyllide reductase
                     (ATP-dependent) subunit B"
                     /protein_id="HEX3990921.1"
                     /translation="MKLTLWTYEGPPHVGAMRVATAMEGLHYVLHAPQGDTYADLLFT
                     MIERRAKRPPVTYTTFQARDLGGDTAELSKTAAREAYERFKPQALLVGASCTAELIQD
                     DPGGLARALGLPIPVVAVELPAYQKKENWGSAETFYQLVRAFAVRRESSTRPRCNILG
                     PTALGYRHRDDVAEIVALLGRLGVAVNVIAPLGATPADLTRLGDASFNVVLYPETGMQ
                     AASWLSQSFGQGMTKIVPIGVGATRDFIAEVAALAGVDPSGVLEADESRLPWYSRSVD
                     STYLTGKRVFIFGDATHVTAAARIASEELGFTVVGLGTYSREFAREIRATAAKFGIEA
                     LVTDDYLEVEAQIEDLRPELVLGTQMERHVAKRLAIPCAVISAPVHVQDFPARYSPQM
                     GFEGANVIFDTWVHPLMMGLEEHLLGMFRGDTEFHDDAGPSHLGETTPILPAQHKLGW
                     DSAAEKELKKIPFFVRGKARRNTERFALDRGLTDITLETLYDAKAHFGR"
     gene            2987..6580
                     /locus_tag="VHX39_07100"
     CDS             2987..6580
                     /locus_tag="VHX39_07100"
                     /EC_number="6.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium chelatase subunit H"
                     /protein_id="HEX3990922.1"
                     /translation="MPKRISAADRTCVRVVVVTMDSHLGGSLARAEGALRQDLPNIEV
                     TMHAADEWTGNPSALAACHANIARADIVIAAMLFLEDHIRAVLPALTARREYCDAMIC
                     MLSAGEVVRLTRVGKFNMSTEATGAIAWLKRMRGKGGTGSNARGQMKMLRQLPKLLRF
                     IPGTAQDVRAYLMALQYWLAGSEENLANMVRLLVGRYAAGDRAHLAGSLRAAPPVEYP
                     EVGLYHPRAAGRIVERIDQLPAAGVNGRIGVLLLRSYAISSNAGHYDGVIGALEAAGL
                     QVIPAFASGLDQREAVRHYFVRDGKATVDAVVSLTGFSLVGGPAYNDARAAEELLASL
                     DVPYIAAHPVEFQTLEQWKDDSRGLLPIEATMMVAIPELDGGIWPMTFGGRSSAEGAD
                     RRRDMVPNLERAATLAARVARLVSLRHKARSERKVAVVLFNFPPNAGTVGSAAYLSVF
                     ASLFNTLRGMAAAGYTVDVPDSVDTLRNRLLGGNASLFGANANVLARMPVDDHVRQQR
                     WLEEIEAQWGPAPGRQQTDGSSLFILGETFGNVFVGIQPAFGYEGDPMRLLFEQGFAP
                     THAFCAFYRWINQEFGADAVLHFGTHGALEFMPGKQAGMSGDCWPDRLIGDLPNFYLY
                     ASNNPSEGMIAKRRAGAALISYLTPPVAHAGLYRGLLDLKASLDRWRALPPDADAGQR
                     EALTALVQAQAVTVDLAAAEPAWTDESRLQGLAAALLEMEYTLIPHGLHVVGEGLDPE
                     QRASMLNAASVTDPAERKRLDGLLAVDHEVPAIVHALDGGYIRPAPGGDLLRTTDVLP
                     TGRNLHGFDPFRIPSAFAVRDGARQADRLLDRHTAESGKLPETVAMVLWGTDNLKTEG
                     GPIAQALWLLGAEPRTDSYGRVSGARLVALDILGRPRIDVLATLSGIFRDLLPLQTKL
                     LAEAALMAATAEEPVELNFVRKHALTFVAENGGTMEDAALRVFGNADGAYGANVNNLV
                     GSGTWNDEDELAEAYLKRKGFAYGVDGPPRRHNAVLAHALAHVDVTYQNLDSIEVGVT
                     TVDHYFDTLGGITRAARQARGGSATTVYVGDQTRGDGTIRTISEQVALETRTRALNPK
                     WYEALLKHGYEGVREIEAHVTNTFGWSATTGDVAPWIYEKLSETFMLDPEMRERLAAL
                     NPTACAKIANRLIEAHERNYWSPGEAMREALQRAGEELEDRLEGIGLGVAA"
BASE COUNT         1172 a         2065 c         2115 g         1232 t
ORIGIN      
        1 ttcgggcgat atttgttcgc tgacgccttc ttctgggaag acgtcttcag catgctcgtg
       61 ctggcgctcc acaccgccta tctggcggcg ctggtgaccg gcgcattcga cgcgcgctcg
      121 cagatggcga tcgcgctcgc ggcctatgcc gcctacatcg tcaacgccac gcagttcgtg
      181 ctgaagctgc gcgcggcgcg gttgcagggc tcgctgaccc ccatgcaggc gtcggcatga
      241 gcgcgatcct ctccgcctgc tcggcgcctc ccgcggaact ccccgctata cgtgaacgcg
      301 gccagcgcga ggttttctgt ggactgacca gcatcgtctg gctgcatcgc aagatccagg
      361 acgcgttctt tctggtggtc ggctcgcgca cctgcgccca cctcattcag tccgccgccg
      421 gcgtcatgat cttcgccgaa ccgcgattcg ccacggcaat catagaggaa cgcgatcttg
      481 cgggcatggc ggatgcgaac gacgaattgg acgccgtcgt cacccagctt ctgcaacggc
      541 ggcccgacat caagctgctg ttcctggttg gctcctgccc atcggaggtg atcaagctcg
      601 acctttcgcg cgccgcattg cgcctggggc agcaattcgg gccggacgtg cgggtgctga
      661 actactcagg cagcggcatc gagacaacat tcacccaagg cgaggacgcc tgcctggcgg
      721 ctctggtccc ggtgctgccg gcaacggaag cacacgaact gctggtcgtc ggtgcgctgg
      781 ccgacgtggt ggaagaccag tttgcccggt tattcgcggc gatgggcatc tacgccgtgc
      841 gtttcctgcc gccccgccgg gccaacgatc ttccccccgt cgggccgcgg acacgcttcc
      901 tgctggcaca gccctttctg gccgacacgg cccgagcgct ggaggaacgt ggcgcgaccc
      961 gaatcgccgc gccgtttccg cttggggtgg aagggaccac gttgtggctg caagccgccg
     1021 catcggcctt cgccgtcccc accgcctcct tccgctccgc caccgatata gctcgcgaac
     1081 ggggccgtcg tgcggttacc cgctatcgat ccgaattggc cggcaagcga atatttctgt
     1141 ttcccgattc gcaactggaa atcccgctcg ctcggttcct cgcgcgtgag ctgtcgatgc
     1201 aagttatcga ggcaggcact ccattcctgc atcgccagca tctggccgag gagctggcgc
     1261 tattgcccga ttccgttcct gtttctgaag gacaggatgt cgaccggcaa ctggaacgat
     1321 gccgtgcggc aaagccggat ctggttgttt gcggtctggg actggcaaat ccgctggaag
     1381 ccgaagggct gacgacgaaa tggtcgatag aacttctgtt cacaccggtg cagggatacg
     1441 agcaggctgg tgacctggcg gaactgttcg cgcgcccact ggtgcgacgc atgcgattgg
     1501 cggtgtgatg ccatgaagct caccctgtgg acatatgaag gccctcccca cgtcggtgcg
     1561 atgcgcgtcg ccacggcgat ggaggggctg cattatgtgc tgcatgcccc gcagggcgac
     1621 acctacgccg atctgctgtt caccatgatc gagcggcgcg cgaaacggcc cccggtcaca
     1681 tacacgacgt tccaggcgcg cgacctcggt ggcgacacgg cggaattgtc caaaactgcc
     1741 gcgcgcgagg cgtacgagcg gttcaagcct caggcgctgc tggtgggtgc gtcctgcacg
     1801 gccgaactga tacaggacga tcccggcggc ttggcacgcg cgctcggctt gccgatcccg
     1861 gtggtcgcgg tcgaactgcc agcgtatcag aagaaagaga actggggttc cgccgagaca
     1921 ttctaccagt tagtgagggc attcgccgta cgccgcgaat caagcacccg cccccgctgc
     1981 aacatcctgg gaccgacagc cctgggctat cgccatcgcg acgacgtcgc ggaaatcgtt
     2041 gcgttgctcg gccgcctcgg cgtggccgtc aacgtgatcg cccccttggg cgcgacgccc
     2101 gccgatctga caaggctcgg cgatgccagt ttcaatgtcg tgctgtatcc ggaaaccggc
     2161 atgcaggcgg cgtcttggct gtcccagtcg ttcgggcagg gaatgacgaa gatcgtgccc
     2221 atcggcgttg gggccacccg cgatttcatt gccgaggtag ccgcactggc cggcgtcgat
     2281 ccgtccggtg tgttggaggc cgacgaaagc aggctgccat ggtactcgcg gtcggtcgat
     2341 tcgacctacc tgaccggcaa acgggttttt atcttcggcg atgcgaccca cgtgaccgcg
     2401 gcggctcgta tcgcatccga ggaacttggc ttcaccgtcg tcggccttgg cacctattcc
     2461 cgcgagtttg cgcgcgaaat ccgcgccact gccgcgaagt tcggcatcga ggccctggtt
     2521 accgacgatt atctggaagt cgaggcacag atagaagacc tgcggccgga actcgttctt
     2581 ggcacgcaga tggaacgaca tgtcgccaag cggctggcaa ttccatgtgc ggtcatctcg
     2641 gcaccggtgc atgtgcagga tttcccggcc cgctactcgc cgcagatggg tttcgagggt
     2701 gccaacgtga tcttcgacac ctgggtccat ccgttgatga tggggctgga ggaacacctg
     2761 ttgggcatgt tccgtggcga caccgaattt cacgacgacg ctggcccttc gcacctcggc
     2821 gaaaccaccc ccatcctgcc cgcgcaacac aagcttggtt gggacagcgc tgctgaaaag
     2881 gaactgaaga aaatcccctt cttcgtcaga ggcaaagcgc gccgcaacac ggaacgtttt
     2941 gccctggatc gtggcttgac cgatatcacc ctggaaacgt tgtacgatgc caaagcgcat
     3001 ttcggccgct gatcgcacct gcgtgcgagt tgtcgtggtg acaatggaca gtcacctcgg
     3061 tggatcgctg gcgcgggccg agggcgcgct gcgtcaggat cttccgaata tcgaagtaac
     3121 aatgcacgcc gccgacgaat ggaccggcaa cccctcggcc ctcgcggcct gccatgccaa
     3181 tatcgcccga gcggatatcg tgatcgcggc gatgctgttc ctggaagacc atattcgcgc
     3241 cgtgctgcca gccctgaccg ccaggcggga atactgcgac gcgatgatct gcatgctgtc
     3301 cgcaggcgaa gtcgtcagac tgacccgcgt cggcaaattc aacatgtcga ccgaggcgac
     3361 cggcgccatc gcctggctga aacgaatgcg cggcaagggc ggaaccggct ccaacgcccg
     3421 cggccagatg aagatgcttc gccagttgcc gaagctgctc cggttcattc cgggaacggc
     3481 acaggatgtg cgggcatatc tcatggcact gcaatactgg ttggccgggt ccgaggaaaa
     3541 cctcgccaat atggttcgcc tgctggtcgg tcgctacgct gcgggggacc gcgcccatct
     3601 cgccggttcg ttgcgtgcgg cgccgccggt cgagtacccc gaagtcgggt tgtatcatcc
     3661 gcgcgccgcc ggccgcatcg tcgaacgtat cgatcaattg ccggccgccg gcgtcaatgg
     3721 ccgcatcggc gttctactgc tgcgatctta tgcgatatcc agcaacgccg gccactacga
     3781 cggggtgatc ggtgcgctgg aggcggcagg gttgcaggtc ataccagcgt ttgccagcgg
     3841 tctcgaccag cgagaagccg tgcgacatta tttcgtccgc gacggcaaag cgactgtgga
     3901 cgccgtggtg tctctgaccg gtttcagcct tgtcggcggc cccgcctaca acgacgctcg
     3961 ggcagccgag gaactgctgg ccagtctgga tgttccctat atcgccgccc atcccgtcga
     4021 attccagacg ctggaacaat ggaaagacga ttcccgcggc ctgctgccga tcgaggccac
     4081 gatgatggtg gccatccccg aactggacgg cggaatctgg ccgatgactt tcggcggccg
     4141 ttcaagcgcg gaaggggccg acaggcgccg ggacatggtg ccgaatctgg agcgggccgc
     4201 gacgctggcg gcgcgtgtcg cccggctggt ttcactgcgc cacaaggctc ggtccgagcg
     4261 gaaagttgct gttgtcctct tcaacttccc accaaacgcc ggcaccgttg gttcggcggc
     4321 atatttgtcg gtcttcgcat cgctgttcaa cacgctgcgc ggcatggcgg cggccggata
     4381 cacggtcgat gtcccggata gcgtcgatac gctgcggaac cgtctgctgg gtggcaatgc
     4441 ctccttgttc ggcgccaatg cgaacgtctt ggcgcggatg cccgtcgacg atcatgtgcg
     4501 gcagcagcgc tggctcgaag aaatcgaggc acaatggggg ccggcgccgg gacggcagca
     4561 gaccgacggg tcatctctgt tcatcctggg tgagacgttc gggaacgttt tcgtgggcat
     4621 ccaaccggcc tttggatacg agggcgatcc gatgcgtctg ctgttcgagc agggcttcgc
     4681 gccgacgcat gccttctgcg ctttctaccg ctggatcaac caggaattcg gtgcggatgc
     4741 ggtgctgcac tttggcaccc acggcgcgtt ggagttcatg ccgggcaaac aggctggcat
     4801 gtccggcgac tgctggcccg accggttgat cggcgatcta cccaatttct acctgtatgc
     4861 ctccaacaac ccgtcggaag gtatgatcgc gaagcgccgc gccggcgccg ccttgatcag
     4921 ctacttgacg ccgcccgttg cacatgccgg gctgtatcgt ggcctgctgg acctgaaggc
     4981 gtcgttggac cgttggcgcg cattgccgcc ggatgccgat gcgggacagc gcgaggcgct
     5041 gacagccttg gtgcaggcgc aagccgtgac cgtggatctg gcggcggccg aaccggcctg
     5101 gaccgatgaa tcgcgtcttc aagggctggc tgccgccctg ctggaaatgg aatacacgct
     5161 gatcccgcac gggctgcatg tggttggtga gggcctggat ccggaacagc gtgcgtcgat
     5221 gctgaatgcc gccagcgtaa cggatccagc ggaacgtaag cggctggacg gattgctggc
     5281 cgtggaccac gaggtgccgg cgatcgtgca tgcattggac ggcggctata tccgtcccgc
     5341 accgggcggt gacctgctgc gaacaaccga tgtgctgccg acaggccgca atttacacgg
     5401 tttcgatccg tttcgtatcc ccagcgcctt cgccgttcgg gatggtgcgc gccaggccga
     5461 ccgcctgctg gatcggcaca cggccgagag cggcaagcta cccgaaaccg tagccatggt
     5521 actgtggggc acggacaacc tgaagacgga aggcggcccg atcgcccagg ctctttggct
     5581 gcttggcgcc gaaccccgca ccgacagcta cggccgtgtc tccggcgccc gcctggtggc
     5641 gctggatatc ctgggacgcc cgcgtatcga tgtcctggca acgttgtcgg gcattttccg
     5701 agacctgctg ccgttgcaga cgaaacttct ggccgaggcc gcgctgatgg cggcgacggc
     5761 ggaagaaccg gtcgaattga acttcgtccg caagcatgcc ctgaccttcg ttgccgaaaa
     5821 tggcggcacg atggaagacg cggcattgcg tgtgttcgga aacgccgatg gtgcctacgg
     5881 cgccaacgtc aataatcttg tcggcagcgg cacatggaat gacgaagatg aactcgccga
     5941 ggcctatctg aagcgcaaag gctttgcata cggcgtcgat ggaccgccgc gccggcataa
     6001 cgccgtgttg gcccatgcgc tggcccatgt cgatgtgacc taccagaatc tcgattcgat
     6061 cgaggtcggc gttaccaccg tggaccacta tttcgatacg ctcggtggca taacccgagc
     6121 ggcgcggcag gctcgcggcg gatcggcaac gacggtctat gttggcgatc agacgcgcgg
     6181 tgacggaacg atccgaacca tttcggaaca ggtcgcactg gaaacccgca cgcgtgcact
     6241 gaacccgaaa tggtatgagg cactgctcaa gcacggctac gaaggtgttc gggaaattga
     6301 agcccatgtc accaacacct tcggatggtc cgcgacgacc ggcgacgtcg cgccctggat
     6361 ttatgaaaag ctgtccgaaa cgttcatgtt ggaccccgag atgcgggaaa gactggcggc
     6421 actaaatccg acggcttgcg cgaaaatcgc caaccggctg atcgaagcac acgaacgaaa
     6481 ctactggtcg ccgggtgaag cgatgcgaga agccctacag cgcgccggcg aggaacttga
     6541 agaccgtctt gaaggcatag gtttgggggt ggcggcatga cggt
//
LOCUS       DATAVD010000382         2558 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_593506, whole genome shotgun sequence.
ACCESSION   DATAVD010000382 DATAVD010000000
VERSION     DATAVD010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2558
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_593506"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(182..1390)
                     /locus_tag="VHX39_07105"
     CDS             complement(182..1390)
                     /locus_tag="VHX39_07105"
                     /inference="COORDINATES: protein motif:HMM:NF024241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990923.1"
                     /translation="MPDETLHWRRNMYVCLFGSFTNVTAMTLVLPFLPIYVEHLGVQG
                     HAAIVQWSGIAYGIPFLGAGLLAPLWGKMADLYGRKLILIRASLAMAICMSLIGVAQD
                     IYQLVGLRLLAGLLGGYASGAVVLVATQTPKEHSGWALGTLSTGAMAGTLLGPLIGGV
                     LPGLIGIRATFFLAGGVIFLAFLATTLLIHEDRQHLQPGVRRVTRGAWSMIPDRRPVI
                     AMLTTAMLLMLANMSIEPIITVYVGQLMPPGGDVVFTAGLVMAASAVGSVLAAPRLGR
                     MADRIGHWNLIIICLLACGVLLIPQAFVSNSWELIGLRFLMGVALAGLLPAIGATIRH
                     SVPHGAAGTILGYNTSAQYAGQVLGPLAGGFVGGHVGMRAVFLATTLIMFGGAAFNWI
                     ITRQVIRPAT"
     gene            complement(2071..>2558)
                     /locus_tag="VHX39_07110"
     CDS             complement(2071..>2558)
                     /locus_tag="VHX39_07110"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990924.1"
                     /translation="EFRLWDKQHAAVFGLQMNDVVSIGPAHMQGVVHDSIFYWDLNDK
                     TRDFGERFWKRNGKPPSETHAVNYSAVTQYLKAIRAAGTKETGAVLKALHDMPVEDLV
                     TPGGTVRGDGRLVRPTFLLKVKPADQVKRKYDVFELLRQVPGSEAYRPLAQSACPLVK
                     T"
BASE COUNT          563 a          795 c          730 g          470 t
ORIGIN      
        1 cagaccgaat ccatcggggt caaggggttt ttcagcggcc tgctaaagcg cgagtcttta
       61 aggaccggcg gggggccacg acgcgttgtg ccctccgccg ctatgaccgg ggcctgcaaa
      121 cgttcattga tcgcaggctt cccggaccga cggattccga aaatcaagag tttcggatcg
      181 ctcaggtcgc cggcctgatg acctgtctgg tgataatcca gttgaacgcc gcaccgccaa
      241 acatgatcag cgtcgttgcc agaaagacgg cgcgcatgcc gacatggcca ccaacaaagc
      301 cgcccgcaag cggcccaaga acctgcccgg catattgagc cgacgtgttg tagccaagaa
      361 tcgtgccggc agcgccgtgt ggcacgctgt gccgaatggt cgcgccgatc gccggcagca
      421 gcccggcgag tgcgaccccc atcagaaaac gcagtccgat cagttcccaa ctattgctga
      481 cgaaagcctg ggggatcagc agtaccccgc acgccagcag gcagatgatg atcagattcc
      541 agtgcccgat gcgatcggcc atgcgcccca ggcgcggggc ggcaagcacg ctaccgacgg
      601 cggacgccgc catcaccagt cccgcagtga acaccacatc gccgcccggc ggcatgagtt
      661 gcccaacata aacggtgatg atcggctcga tcgacatgtt cgccagcatc agcagcatcg
      721 ccgttgtgag catggcgatg accgggcgcc gatcagggat catggaccag gcaccgcgcg
      781 tcacgcgccg gacacctggt tgcaaatgct ggcgatcctc atggatcagc aacgtggtcg
      841 ccagaaaggc cagaaaaatg acaccgcctg cgaggaagaa cgtcgcgcga atgccgatca
      901 gacctggcaa aacgccgcca atgagcggac cgaggagcgt gcccgccatg gctccggtgg
      961 ataacgtgcc aagcgcccag ccggaatgtt ctttcggggt ttgggtggca accaatacga
     1021 cggctcccga cgcataaccg ccgagcaggc ccgccagcag gcgtagccca acaagctgat
     1081 aaatatcctg tgcaacgcca atcagcgaca tgcagattgc catggccaga ctcgcgcgta
     1141 tcaaaatcaa tttgcgaccg tagagatccg ccattttgcc ccagagggga gccagcagcc
     1201 cggcgcccag gaagggaatg ccgtaagcga tgcccgacca ctgcacgatg gcggcgtgac
     1261 cctggacgcc gaggtgttcg acgtaaatcg gcaggaacgg caaaaccaga gtcatcgccg
     1321 tgacattcgt aaatgagccg aacaggcaca cgtacatgtt gcgccgccaa tgcaatgtct
     1381 catctggcat cgatttcgtt ccgtaaaaaa atcgggttgg gccggaggga tgattgagcc
     1441 gagccggttg ttgcgcagga agcgtcgcaa aaattggcaa cgctccgcat cgtcgatacg
     1501 ggcccgaaag tgtcttgggt cccgcttcca ttcaggatca ggccccaggc ggagcaacgt
     1561 tccgcctgct ggcagagtgt ttcggccgtt ccgcaccgct gcggttcgtc acgcgacagg
     1621 cgtccatcgc gccccttcga aaaccggtgc aacaaatgca taagtgtctg tccggaaaca
     1681 aatgttacca cggcgaggcg ttgggtggga cccggaacgg ttcaaaccgc attgatccat
     1741 ctgcgtcaat cttcgtccat cccttttctg atttgcgttg aaattcttat cgcggatcaa
     1801 tcgtcggcgt ttggcctggc aaaaggactt aacgaagata agaaaaggga tggacgaaga
     1861 ttcacgcaga tgctctcgga ccatgctccg ttcgggaaac caatcggacc tcgattccga
     1921 ttcctttcaa taggatgatt ccggacggac actaagagtg cgggctatca gggctgatcc
     1981 tgatattgcc gacacacagc gccaaattgc cggtatctcg tgactttcgg acaggacgcc
     2041 gcgactccct tgcctggctc tgtcagcgga tcatgtcttc accagcgggc acgcgctttg
     2101 tgccagcgga cggtatgcct ccgatccggg aacctgccgc aggagttcga atacgtcgta
     2161 ttttcgtttc acctgatcgg ccggcttcac tttcagcaaa aaagtcggtc ggaccaaccg
     2221 cccatcgcct cgcacagtgc caccgggggt taccaggtct tccaccggca tatcatgcaa
     2281 cgccttcagc acagcgcccg tctccttggt tcccgccgcg cggatcgcct tcaagtactg
     2341 cgtcacagcg ctgtagttca ccgcatgcgt ctctgacgga ggcttcccat tccgcttcca
     2401 gaagcgctca ccgaaatcgc gcgtcttgtc gttcaggtcc cagtaaaaaa tgctgtcgtg
     2461 caccacgcct tgcatgtgcg ccggaccgat cgaaacgacg tcgttcatct gcaggccaaa
     2521 caccgccgcg tgctgcttgt cccacaacct gaactcgt
//
LOCUS       DATAVD010000383         1819 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_967038, whole genome shotgun sequence.
ACCESSION   DATAVD010000383 DATAVD010000000
VERSION     DATAVD010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_967038"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..615)
                     /locus_tag="VHX39_07115"
     CDS             complement(<1..615)
                     /locus_tag="VHX39_07115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004273962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3990925.1"
                     /translation="MDLAICNKVAVVTGPAKGMGAAVTRAFAAEGCKLALLGRDTQAI
                     EPIAAEVRAMGGEALILRCDLTDDASCDAAIAATMQAFGRIDILVNIAGGSGPIGKTG
                     AQTTPEEFDEIVTLNMNGCFHTIRAVAPFMIAQGGGKIVNVGGTFGMRGRAGRLAYSA
                     SKWGLRGITKSFALELGPHNINVNYVAPGMVDGNRFRTKVVPEMA"
     gene            732..1646
                     /locus_tag="VHX39_07120"
     CDS             732..1646
                     /locus_tag="VHX39_07120"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3990926.1"
                     /translation="MRHVRIWQYVDEAARCGSIRRAAERLNITPSALQRRIQDVEEDL
                     GTELFERTPSGVKLTAAGEIFIHWIRSHTAALQHAQSRIEDLSGLRRGQVRIACSQAM
                     AVSFLPAEIETFRSEYPMVRFSVMVNDHGTAIAALRQYEADLALVFQPERYADFQPLM
                     AIGQRLMAIFAKGHPLEQKATVRLRECADYPLALADRSFSGRRIVDDIMASVSTPMQV
                     ELESNSFELLRNFVRRGRAVMLQIELGAVEDLPDSGLVGRPIDDRDLAFGSLVLGQLK
                     GRTLPVAVAKFADQIARRMDQLRTLPTV"
BASE COUNT          317 a          552 c          598 g          352 t
ORIGIN      
        1 cgccatttcc ggcaccacct tggtgcgaaa acggttgccg tcgaccatgc cgggcgcgac
       61 atagttgacg ttgatgttgt gggggccaag ttccagcgcg aagctcttgg tgatgccccg
      121 cagtccccat ttcgaagccg agtaggcgag gcgcccggcg cggccgcgca tgccgaaggt
      181 gccgccgaca ttgacgatct tgccgccgcc ctgggcgatc atgaagggcg ccaccgcacg
      241 gatcgtgtgg aagcagccgt tcatgttgag ggtgacgatc tcgtcaaact cttccggcgt
      301 ggtctgggcg ccggtcttgc cgatcggccc cgaaccaccg gcgatgttga ccaggatgtc
      361 gatccgcccg aacgcctgca tcgtggccgc gatcgcggcg tcgcagctag cgtcatccgt
      421 caggtcgcag cgcaggatca aggcctcgcc gcccattgcg cggacctcgg cggcgatggg
      481 ttcgatcgcc tgggtgtcgc gacccagcag ggccagcttg cagccttccg cggcgaaggc
      541 ccgcgtcacc gctgcgccca tgcccttggc gggtccggta acgaccgcga ctttgttgca
      601 aattgccaga tccatccggg atcgtccttc tctgtagcgg ggaaaaggtg ccgaaacccg
      661 gtgactcatt cgaatgccga tttcgattga ggtggatacg aaaaagtata cgctcgcttg
      721 aggaggcctc catgcgccac gtgcggatct ggcaatatgt cgatgaggcg gcccggtgcg
      781 ggtcgatccg gcgggcagcg gagcggctga atatcacgcc atccgcgctg cagcggcgta
      841 tccaggatgt cgaggaggat ttgggaacag agctgttcga gcgaacgccc agcggcgtaa
      901 aactgaccgc cgccggcgag atcttcatcc attggatcag gtcccatacg gcggcccttc
      961 aacacgcaca gtctcggatc gaggacctgt cagggctgcg gcgtggccag gtgcggatcg
     1021 cgtgcagcca ggcgatggcg gtttcgttcc tgccggcgga gatcgaaacg tttcgttccg
     1081 aatacccgat ggtgcgcttt tcggtgatgg tgaacgacca tggcaccgcc atcgcggccc
     1141 tgcggcagta cgaggcggat cttgcgctgg tattccagcc ggagcgctat gccgacttcc
     1201 agccgttgat ggcgatcggc cagcgcctga tggcgatctt cgccaagggt catccgctgg
     1261 agcaaaaggc gacggtgcga ttgcgcgaat gcgcggacta tccgctggcg ctggccgacc
     1321 gcagcttctc cgggcgccgg atcgtggacg acatcatggc gtccgtatcc acgccgatgc
     1381 aggttgagct tgaatccaac tccttcgaac tgttgcgcaa cttcgtccgg cgcggtcgcg
     1441 ccgtgatgtt gcagatcgaa ctgggggcgg ttgaggattt gccggattcc ggccttgtgg
     1501 gccggcctat cgacgatcgc gacctggcgt tcggatcatt ggtgctgggt caattgaagg
     1561 ggcggacatt gccggtcgcc gtggcgaaat tcgccgacca gatcgcccgc cgcatggacc
     1621 agttgcgcac gctgccgacg gtctagtggt ccgatcccga cagaagcatc cccatgcggt
     1681 cgggtgaacc ggcccacaaa atcaaaggct ggtggttcaa attggacggc actatccgtc
     1741 tgatttgaac cactaatggt ctgaatctga agtccgtcac actgggcgac cctcggtttc
     1801 gaagcaccgg ctctgtgtt
//
LOCUS       DATAVD010000384         2820 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1525404, whole genome shotgun sequence.
ACCESSION   DATAVD010000384 DATAVD010000000
VERSION     DATAVD010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2820
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1525404"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(105..1388)
                     /gene="mnmE"
                     /locus_tag="VHX39_07125"
     CDS             complement(105..1388)
                     /gene="mnmE"
                     /locus_tag="VHX39_07125"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEX3990927.1"
                     /translation="MNDDTVFALASGAGRAAIAIFRISGPDSAAALTALCGTLPLPRR
                     AVVRALRDPDGALLDRAMVLWLPGPQSYSGEDSAELHVHAGRAVIDAVADRLGALGIR
                     PAEAGEFTRRAFLNGKLDLVSAEAVHDLVAAETDAQRRQALRQLDGALGDLYRDWSER
                     LRSALARQEALIDFPDEDLPPEVEADLLASVQSLRGEIAAHLDDHQRGEKLREGLCFA
                     ITGAPNVGKSSLINALAERDVAIVSATPGTTRDAIETRIVLAGVPVTLVDTAGLRDTT
                     DPTEAEGVRRARARAAAADLVITVIEASTSSIHDAGGLVVANKSDLHPERPVDGLAVS
                     ALTGAGMNALRTRLAAEAKALTQASGPPPLTRARHRTALMAAARWLADAEDAIEPELR
                     GEAMRLALRALGTITGQVGVEDILDSIFREFCIGK"
     gene            complement(1385..2059)
                     /locus_tag="VHX39_07130"
     CDS             complement(1385..2059)
                     /locus_tag="VHX39_07130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit B"
                     /protein_id="HEX3990928.1"
                     /translation="MSGTKGLNRQQMADLIARQFQDGWVVNLGVGIPTMCSNTDIGDT
                     DIVYHSENGVIGYGPVAAEGHEDLNLVNAGGQNVTLKPGAAVVHHADSFAIIRGGHID
                     VTVMGAYQVSCRGDFANWKLKGQKGGGIGGAMDLAACAKRVFIILEHTTRDGSSRLVA
                     QCDLPVTARGVVKLVATNYGLFEPTGDGFLLREIAPGMTVDEVRAATATKLTVADPLP
                     VVRLAG"
     gene            complement(2056..>2820)
                     /locus_tag="VHX39_07135"
     CDS             complement(2056..>2820)
                     /locus_tag="VHX39_07135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit A"
                     /protein_id="HEX3990929.1"
                     /translation="RRTRREETMAAKSKVVPSFREAVADIPDGSVIAFGGFAMPGVPY
                     NLIQALLEQGAKRLTLVGNTTGGAQQPRMPDMGMLVENGQVAKVICAFTAATRPSDAL
                     PFTKYYESGECDAELVPQGTLAERLRAAGAGIPAFYTPTAVGTELAEGRETRVINGRE
                     YLLEYALPLDYAFIRAHRADDFGNLQFHRAQRNFNPVMATAARCTIVEVDEPIVPCGE
                     IDADAVHCSGLFVQRLVRVPPPPEGLWPTKRQERRR"
BASE COUNT          523 a          958 c          849 g          490 t
ORIGIN      
        1 ccgtcgagcg gcgtggtcgc ggtcgggatc gaaatcagct cggttctcat tgcggctcct
       61 tgtcagcccg gaaaaggtgg ccaccgcgac cggcgacggc gaggttactt cccaatacag
      121 aactcgcgaa agatagagtc cagaatatct tccacgccga cctgaccggt gatcgtacca
      181 agcgcacgca atgcgagccg catcgcctcc ccgcgcagtt ccggttcgat cgcgtcctcg
      241 gcgtccgcca gccagcgcgc ggccgccatc agcgcggtgc gatggcgggc tcgggtcaag
      301 ggcggcgggc cgctcgcctg ggttaacgct ttggcttctg ctgccaggcg agtccgaagc
      361 gcattcatcc cggcacctgt cagtgcactg acggcaaggc catcaaccgg tcgttccggg
      421 tgaagatccg atttgttggc aacgaccaga cctccggcgt catgtatcga cgacgtgctt
      481 gcctcgatta ccgtgatcac aagatcggcc gccgctgctc gcgcgcgggc gcgccgcacg
      541 ccctcagcct cggtcgggtc ggtggtatcc cgcagaccgg cggtatcgac cagagtgacg
      601 ggaacgccgg ccagcacgat ccgcgtttcg attgcgtcac gggtggtgcc cggggtggcc
      661 gacacgatcg ccacatcgcg ttccgccagc gcattgatca acgaggattt gcccacattg
      721 ggtgcacccg tgatggcgaa acacagacct tccctcagct tctcgccgcg ctggtgatcg
      781 tcgagatgag cagcgatctc accgcgtaac gactgcaccg atgccaacag gtctgcctcg
      841 acctccggcg gcaaatcttc atcgggaaag tcgatcagcg cttcctgccg cgccagagca
      901 ctccgcagac gctccgacca gtctcggtac aaatcgccca gggcgccatc caactggcgc
      961 agcgcctggc gccgttgcgc atcggtttcg gcagcgacaa ggtcgtgcac cgcctcggcg
     1021 gataccagat ccagcttgcc attcaaaaac gcccgtctgg tgaattcccc cgcctccgcc
     1081 gggcgtatgc ccagagcgcc cagacggtca gcgacagcgt cgatcaccgc acggccggca
     1141 tgcacgtgaa gttcggcgga gtcttcaccc gagtaagact gcgggcctgg cagccacaac
     1201 accatggcac ggtcgagcaa cgcgccatca ggatcgcgca atgcccgcac cacagcccgt
     1261 cgcggtaacg gcagagttcc gcacagtgcc gttaacgccg cagcgctgtc cggcccgctg
     1321 atccgaaaaa tcgcaatcgc tgcacggccc gccccggacg caagggcgaa gaccgtatcg
     1381 tcgttcaccc cgcgagccgt accacaggca acggatcggc caccgtcagc ttcgttgcag
     1441 tcgcggcgcg gacttcgtcg actgtcatcc ccggtgcaat ctcgcgcaac aaaaacccgt
     1501 cgccggtggg ttcgaacaat ccgtagttgg tggcaacgag tttcaccacg ccgcgagccg
     1561 tgaccggcag atcgcattgc gccacaagac gcgacgaacc atcgcgcgtg gtgtgctcca
     1621 ggatgatgaa cacccgtttg gcacaggcgg cgaggtccat ggcaccaccg atcccgccac
     1681 ccttttggcc cttcaatttc cagttggcaa agtcgccgcg gcaggacacc tgatacgcac
     1741 ccatgaccgt gacatcgatg tggccgcctc ggatgatggc gaaactatcg gcgtgatgca
     1801 ccaccgcagc acccggtttc agcgtcacat tctgcccgcc ggcattgacg aggttcagat
     1861 cctcatgccc ctcggccgcc accgggccat agccgatcac gccgttttcc gaatgataga
     1921 cgatgtcggt atcgccgata tcggtgttcg agcacatcgt cggaatgccg acgcccagat
     1981 tgacaaccca gccatcctgg aattgccgcg cgatcagatc ggccatctgc tggcggttga
     2041 ggcctttggt tccgctcatc ggcgtcgctc ctgccgtttg gtgggccaga gcccctcggg
     2101 cggcggcggc acccgcacca accgctgcac gaacaatccc gagcaatgga ccgcatcggc
     2161 atcgatctcg ccgcacggca cgatcggctc gtcgacctca acgatcgtgc aacgggcggc
     2221 ggtcgccatc accggattga agttgcgctg cgcacggtgg aattgcaggt tgccgaaatc
     2281 gtcggcgcga tgcgcgcgaa tgaacgcgta atcgagcggc agagcatatt ccagcaaata
     2341 ctcgcggcca ttgatcacgc gggtttcacg gccctcggcg agttcggtac caaccgcggt
     2401 cggtgtgtaa aatgccggaa tgcccgcgcc ggccgcacgc agacgttccg ccagagtgcc
     2461 ttgcggcacc agttcggcgt cgcactcgcc ggactcgtaa tattttgtga acggcagcgc
     2521 atcggacgga cgcgtggcgg cggtgaaggc gcagatcact ttggcgacct gtccgttctc
     2581 caccaacatc cccatgtccg gcatgcgcgg ctgctgcgca cccccggtgg tgttgccaac
     2641 cagggtcaga cgtttcgcgc cttgctccag caaagcctgg atcaaattat acggaacccc
     2701 gggcatggcg aagccgccaa atgcgatgac gctgccgtca ggaatgtcgg ctaccgcctc
     2761 ccggaagctg gggaccactt tggatttcgc ggccatcgtt tcctcgcgtc gtgtgcggcg
//
LOCUS       DATAVD010000385         1505 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3013510, whole genome shotgun sequence.
ACCESSION   DATAVD010000385 DATAVD010000000
VERSION     DATAVD010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3013510"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..888)
                     /locus_tag="VHX39_07140"
     CDS             complement(<1..888)
                     /locus_tag="VHX39_07140"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990930.1"
                     /translation="MTLQTEEKPQSRSIRWDRGIWMMAAYGFVSGLPLPLSTFTLRYW
                     LSESGAARSLIGFTAYIGLAYSFKFVWSPMLDQVAPPGFMRHLGQRRGWLATIQPALA
                     CAAVLLALTNPGTSPATSIAAAALVAFLSASQDIAIDAWRIETFPQRQQGEALAAYVW
                     GYRFAMLAATTGAIWASGIVGWHIALLGIAVLLVLGPVVTLLAEEPKSEAGGPTRDGT
                     RETLARRVRHSVLDPLQDFLTRPGALIILAFVAIFKLGEAMGGIMTAPFYRELGFTRD
                     AIAGSGPFSLVATLAGITFG"
     gene            complement(952..>1505)
                     /locus_tag="VHX39_07145"
     CDS             complement(952..>1505)
                     /locus_tag="VHX39_07145"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3990931.1"
                     /translation="LMPKMPAQDPDMIIRDATEADVPEIQSIYAHHVLTGTGTFEEEP
                     PSVEQMLARYRHIVDHGWRWLVAADDTGVLGYGYYSQFRARTAYRYCVEDSVYVRENV
                     RGQGVGKALVRELVDICTAAGMRQMIAVIGDSENVGSIGVHASLGFQKVGTLRASGIK
                     FGRWLDSVYMQRGLGRGDLDIPA"
BASE COUNT          301 a          501 c          463 g          240 t
ORIGIN      
        1 gccgaacgta atcccggcca gagttgcgac cagggaaaaa ggccccgacc cggcgatcgc
       61 gtcgcgcgtg aaaccgagct cgcggtaaaa tggtgcggtc atgatgccgc ccattgcctc
      121 gcccagtttg aagatggcga cgaaggcgag gatgataagg gcgcccggcc gggtcagaaa
      181 atcctgcagc gggtcgagca ccgagtgcct tacccgacgc gccagcgttt cacgtgtccc
      241 gtcgcgtgtc ggtccgccag cttccgattt cggttcctct gccaacagcg tcaccactgg
      301 gcctagtacc aacagcacag cgattccgag cagggcgatg tgccagccga cgatgcccga
      361 agcccagatg gccccggtcg tcgccgccag catcgcgaac cggtagcccc agacgtaggc
      421 tgccagcgcc tcgccctgct gcctttgggg aaaggtctcg atccgccagg cgtcgatcgc
      481 gatatcctgg ctcgcggaaa gaaacgccac cagcgccgcc gcggcgatcg aagttgccgg
      541 cgaggtcccc ggattggtca acgccagtaa aaccgcggcg cacgcgagcg ccggctggat
      601 cgtcgccaac cagccgcgcc gctgccccag atgccgcatg aatccgggcg gtgccacctg
      661 gtcgagcatc ggcgaccaaa cgaacttgaa cgaataggcc agaccgatgt aggcggtgaa
      721 accgatcagc gatcgcgccg ctccactttc agacaaccaa tagcgcagcg tgaacgtgga
      781 cagcggtaac ggcagcccgg agacgaaccc gtaggctgcc atcatccaga tgccacggtc
      841 ccaacggatc gaccggctct gaggtttctc ctcggtttgc aaagtcacgg acggcgtttc
      901 agtgccacga ggcgcgagcg ggccagcagc ggagcccgac tccgccaacc gtcacgccgg
      961 aatgtcgaga tcaccgcgtc ccaaccctcg ctgcatgtag accgagtcca gccaccgccc
     1021 gaatttgatc cccgacgcgc gaagggtccc gactttctga aatcccaggc tggcgtgcac
     1081 gccgatcgag ccaacgtttt cggagtcgcc aatgaccgca atcatttggc gcatcccggc
     1141 agcggtgcag atatcgacca gctcgcgcac caatgccttg ccgacaccct ggccgcgcac
     1201 gttctcccgc acgtagacgc tgtcttccac gcagtagcgg taggccgttc gcgcacggaa
     1261 ttgcgaataa tagccatagc cgaggacgcc ggtgtcatcc gcggcaacca gccagcgcca
     1321 accgtgatcg acgatatggc ggtaacgggc aagcatctgc tcgaccgagg gcggttcctc
     1381 ctcgaacgtg ccggtgccgg tcaggacgtg atgggcgtag atggactgga tttcaggaac
     1441 gtcggcctcg gttgcgtcgc ggatgatcat gtccggatcc tgtgcaggca ttttcggcat
     1501 taggc
//
LOCUS       DATAVD010000386         2573 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1712761, whole genome shotgun sequence.
ACCESSION   DATAVD010000386 DATAVD010000000
VERSION     DATAVD010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1712761"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(31..837)
                     /locus_tag="VHX39_07150"
     CDS             complement(31..837)
                     /locus_tag="VHX39_07150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX3990932.1"
                     /translation="MTDPYARYTRLRFDRPHPKVLRITMDNGRMNTADDAMHGELADI
                     WRDVDRDATVNAVIITGAGKVFSAGGDFGMIQQNIDDFDARARQWKEARDIVYNVINC
                     SKPVVSAMRGVAVGAGLVCGMLADVSIATKDCRIIDGHTRLGVAAGDHAAIIWPLLCG
                     LAKAKYYLLLCEQILGAEAERIGLISLAVEDGELDAKALEIATRLAEGAQSAIRFTKY
                     ALNNWLRQAGPTFDASLALEFLGFTGPEVKEGLASHLEKRKPAFPPGSVV"
     gene            complement(990..1292)
                     /locus_tag="VHX39_07155"
     CDS             complement(990..1292)
                     /locus_tag="VHX39_07155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014457273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid stabilization protein"
                     /protein_id="HEX3990933.1"
                     /translation="MPRGDKSAYTDKQTRQAEHIEESYEHRGVPEGEAERRAWATVNK
                     ETGGGKRSGSGRGKPVNTAPSRKGGKLGGEASASRPAAARSAAAKKAAATRKRTSG"
     gene            complement(1356..1931)
                     /locus_tag="VHX39_07160"
     CDS             complement(1356..1931)
                     /locus_tag="VHX39_07160"
                     /inference="COORDINATES: protein motif:HMM:NF017238.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009312 - oligosaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009877 - nodulation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEX3990934.1"
                     /translation="MTESRPPSHFQELYQANPDPWGFETSAYERTKYRNSLLALGGRH
                     FVSGLEVGCSIGVLTRMLASRCDRLLGVDIVEAPLPAARMRCADMPSVRFARMQVPLD
                     WPDEPFDLIVFSEVLYFLSAGDIACCARRVLDTLLPGGAVLLVNWTGETGDPSQGNAA
                     PDRFIAGVGGRLRVVYRERQQNYRLELLVGA"
     gene            complement(1928..>2573)
                     /locus_tag="VHX39_07165"
     CDS             complement(1928..>2573)
                     /locus_tag="VHX39_07165"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PIG-L deacetylase family protein"
                     /protein_id="HEX3990935.1"
                     /translation="APHPDDESLGCGGLIAACVAEQKPPLVVVLTDGAGSHPNSRAYP
                     PDRLRALRAREVREAVACLGLAADRVVLLGQPDTAAPHEGPGFDAVVRQLVALIRRDA
                     GCTAILAPWRHDPHCDHLAASRAAEAAAGSTGIRNVAFPVWGWRLPDATPIPEPLSSG
                     WRLDIRDDLPAKRAAIQAHRSQYGDLITDDPDGFRLPPALLSVFDRPWETYLRS"
BASE COUNT          471 a          904 c          752 g          446 t
ORIGIN      
        1 acagacgcca gaacgatatc gttactcatg tcagacaacc gatccgggcg ggaacgccgg
       61 tttgcgcttt tccaggtggg acgccagacc ttccttgacc tccggcccgg tgaaccccag
      121 gaactccagc gccagcgaag catcgaatgt cgggccggct tgccgcagcc agttgttcag
      181 tgcgtatttg gtgaaacgaa tggcactctg cgccccctcc gccaggcggg tggcaatttc
      241 cagcgccttg gcgtccagtt cgccatcttc gaccgccagg ctgatcagac cgatacgttc
      301 cgcttccgcc cccaggatct gctcgcacag cagcagatag tatttcgcct tggccagacc
      361 gcaaagcagc ggccagatga tggcggcatg gtcacccgcg gcgacgccca gccgcgtatg
      421 accgtcgatg atgcggcaat ccttggttgc gatcgaaacg tccgccagca tgccgcacac
      481 cagtccggca ccaaccgcga cgccgcgcat cgcgctgacc accggcttgg agcagttgat
      541 cacgttgtag acgatatcgc gcgcttcctt ccactgccgg gcacgcgcgt cgaaatcgtc
      601 gatgttctgc tggatcatgc cgaagtcgcc accggccgag aacaccttcc cggcaccggt
      661 gatgatcacc gcattgaccg tcgcatcgcg gtcgacgtcg cgccagatat cggccagttc
      721 gccgtgcatg gcatcgtcgg ccgtgttcat gcggccattg tccatggtga tgcgcaacac
      781 cttgggatgc ggacggtcga aacgcaggcg ggtgtagcgg gcatagggat cggtcatcgg
      841 cagctccacg gtctggatga ccattttgct cggaacatcg ctgaggcgcg aatcatcgcc
      901 tccgccgcct gcgattccgg ctgtcccttg ttgccgtgtc acaacgaagt gcgagtcatc
      961 ctcccgcccg ccggcgtgca acaaaccgct cagccgctcg tgcgttttcg ggttgccgcc
     1021 gccttcttcg cggcagccga acgggcggcg gcaggccggg atgccgaggc ctcgccgccc
     1081 aatttcccac ctttgcggga tggtgcggta ttgaccggct tgccccggcc gctgccgctg
     1141 cgcttgccgc ccccggtttc cttgttcacc gtggcccagg cacgccgttc cgcttcgccc
     1201 tcgggtacgc cccgatgctc gtaactctcc tcgatatgtt cggcttgtcg ggtctgcttg
     1261 tccgtgtaag cggatttatc gccacgtggc atgttcgtgt tcccatgcag aaatcactcg
     1321 aaccgcgccg aaaacgtcca tgcgacccgc cggtttcagg cgcccacaag caattccagc
     1381 cgatagtttt gctgccgttc ccgatatacc acccgcagcc ggcccccgac gccggcgata
     1441 aagcgatccg gcgcggcatt cccctggctg ggatcgcccg tctcgccggt ccaattcacc
     1501 aacagaacgg cgccgccggg tagcaatgtg tccaaaaccc gccgagcaca acaagcgata
     1561 tcgccagcgg acagaaaata gagcacttcg gaaaacacga tcaagtcgaa tggctcatcc
     1621 ggccagtcca gcggcacctg catccgcgcg aaccgcacag atggcatgtc ggcacagcgc
     1681 attcgggctg ccggcaacgg cgcctcgacg atgtcgacgc ccagcaagcg gtcgcaacgc
     1741 gacgccagca tccgagtcaa cacgccgatc gagcagccga cctccaaccc cgatacaaaa
     1801 tgccgccccc ccaaagccag caacgagttc cggtatttgg tccgttcata agcactcgtc
     1861 tcgaaacccc aggggtccgg attggcttga tacagctctt gaaagtggct gggtggtcgc
     1921 gattccgtca tgatcgcaga taggtctccc aaggcctgtc gaacaccgac agcaacgccg
     1981 gcggcagccg gaaaccgtcc gggtcgtcgg tgatcaggtc gccgtattgc gaccgatgcg
     2041 cctgtatcgc tgcccgcttc gccggcaggt cgtcgcggat gtccaggcgc catccggaag
     2101 acaacggttc ggggatcggc gtcgcatccg gcagcctcca cccccaaacc gggaaggcaa
     2161 cgtttctgat cccggtagaa ccggccgcgg cctccgcggc acgtgacgca gcgaggtgat
     2221 cgcaatgcgg atcgtgccgc cagggcgcca gaatggctgt gcatcccgca tcccggcgga
     2281 tcagtgccac caattgcctg acgaccgcgt cgaaacccgg cccctcatgc ggggcggccg
     2341 tatccggttg gcccagcagc accacgcgat cggccgccaa tcccagacac gccaccgcct
     2401 cccgcacctc gcgagcccgc agcgcgcgca gccgatccgg cggataggcc cgcgaattgg
     2461 gatgcgaccc tgcgccgtcg gtcagcacca caaccaaagg cggcttttgc tcggcaacac
     2521 acgcggcgat cagcccgcca catcccaagc tttcatcatc cgggtgcggc gcc
//
LOCUS       DATAVD010000387         2829 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3013565, whole genome shotgun sequence.
ACCESSION   DATAVD010000387 DATAVD010000000
VERSION     DATAVD010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2829
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3013565"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..446
                     /locus_tag="VHX39_07170"
     CDS             <1..446
                     /locus_tag="VHX39_07170"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX3990936.1"
                     /translation="ALNKFPGEYAKLRANPDLVPKMVPEIIRYQSPVVHMRRTALCDA
                     ELNGKTIRKGEKVAMWYISGNRDDEEIEDADSFIIDRARPRQHLSFGFGIHRCVGNRL
                     AEMQLAILWEEILKRFPVIEVLEEPKRSYSNLIHGITSMKVRIPA"
     gene            627..1958
                     /locus_tag="VHX39_07175"
     CDS             627..1958
                     /locus_tag="VHX39_07175"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990937.1"
                     /translation="MAETSATMDGMSDDEHRRQLRRALLASTVGTTIEWYDFLLYGTV
                     TGLVFGRVFFPGSSQLIGVLQAFGVFFIGFVGRPIGAAIFGHYGDRIGRKATLIATLL
                     ITGIATFCVGLVPSYDSIGVWGAVLLTLIRLVQGIGVGGEWGGSVLLAMEWAQTNKHR
                     GFIASWPQFGAPCGLFLANAAVLFFSWWSGDQFLVWGWRIPFFISIVMVGVGLWIRLG
                     ILETPVFQKILDEERTERVPVLEVLKRQPKQVLLTALLRMPEQAPGYIVGAFIFTYGT
                     TVLHQSREFLLWGVIVQTILGFLWVTVSGYLSDVVGRKNMFMFGCVLMGVFGFIYFAM
                     LDTMNPTIIFIAISISLLPVMTLYGPEAALIAESFSPRLRYSGASLGYQLASIIAGGP
                     SPFIATALFASYHSSLPIAIYILGTAIVGLVATALLTDYTGKEISAEYESV"
     gene            complement(2020..>2829)
                     /locus_tag="VHX39_07180"
     CDS             complement(2020..>2829)
                     /locus_tag="VHX39_07180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEX3990938.1"
                     /translation="LTRLFVGSEGTLGVITEIQLRLHGIPEAMSSATCQFPTLRDAVE
                     TVIAIMQTGIPVARMELLDEVQVEASIAYSKLTGLQRLPSLFFEFHGTPAGVQEQAQQ
                     TEDIARECNGSGFRWATDTAERNQLWQARHDAYWACLALKPGHQGIATDAIVPISRLN
                     EAILGAKEDIAASGLTAPIVGHVGDGNFHTVILVPPEPDGLARAWELDKKIVARALEL
                     GGSCSGEHGVGIGKREFLEREHGQDALAVMYSVKQAIDPRGIMNPGKIFLN"
BASE COUNT          492 a          804 c          902 g          631 t
ORIGIN      
        1 gggcgctgaa taagtttccc ggcgaatacg cgaagctgcg cgcgaacccc gatctggtcc
       61 caaagatggt gccggaaatc attcgctatc agtcgccggt cgtgcatatg cggcgcacag
      121 ctctgtgtga tgcggaactg aacggcaaga cgatccgcaa gggcgaaaag gttgcgatgt
      181 ggtatatctc gggtaaccgg gacgatgagg aaatcgagga cgccgacagt ttcatcatcg
      241 accgtgccag accgcggcag catctttcgt tcggcttcgg aatccatcgc tgcgtcggca
      301 accggctggc cgaaatgcag ttggcgatcc tgtgggagga gatcctgaag cggttcccgg
      361 tcatcgaggt cctggaggaa ccgaagcgga gctattccaa cctgatccac gggatcacgt
      421 cgatgaaggt gcgcatcccg gcctgattct ggctggagcg ccgctttggt tgtcacgttg
      481 cttacgatcc cggtccgtgc gaacctcgct ttggctggta ctcgtggtag aagagcgtcg
      541 gatgcagttg ctccgccgat gtcgtcaagt gggagcagca taacaaaggc catttgtgcc
      601 cgcccatcat aatgggagga acgaaaatgg ctgagacttc cgcaacaatg gatggaatgt
      661 ccgacgacga gcatcgtcgt cagttacgtc gtgctttgtt ggccagcacg gtcggcacga
      721 cgatcgagtg gtacgacttc ctgctgtacg gcacggtcac cggtctggta ttcggaagag
      781 tgtttttccc gggttcgtcg caattgatcg gcgtgctgca ggcgtttggc gtattcttca
      841 tcggcttcgt cggccggccg atcggagcgg cgatattcgg ccattacggt gatcggatcg
      901 gccgcaaggc aaccttgatc gccaccctgt tgatcacggg catcgcaacg ttctgcgtgg
      961 gcctggtgcc gagttacgac agtatcgggg tctggggtgc cgtcttgctg accctgatcc
     1021 ggctggttca gggcatcggc gtcggcggcg aatggggcgg gtccgttctg ctcgcgatgg
     1081 aatgggcgca gaccaacaaa catcgcggct tcatcgcctc ctggccgcaa ttcggcgcgc
     1141 cctgcgggct gttcctggca aatgccgccg tgctgttttt cagttggtgg tcgggtgatc
     1201 agttcctggt gtggggctgg cgcattccgt tcttcatcag catcgtcatg gtcggcgtcg
     1261 gtctgtggat ccggcttggc attctcgaaa cgccggtgtt tcagaagatc ctcgacgaag
     1321 aacgtaccga gcgtgtgccg gtgctggaag tgctgaagcg gcagccgaaa caggtcctgt
     1381 tgacggcgtt gctgcggatg ccggagcagg caccgggata tatcgtcggc gcgtttatct
     1441 tcacctatgg cacaacggtg ctgcatcaat cgcgcgagtt tttgttgtgg ggcgttatcg
     1501 tacagaccat tctggggttt ctgtgggtca ccgtctcggg atatttgtcc gatgtcgtcg
     1561 gccgcaagaa catgttcatg ttcggttgcg tgctcatggg ggtgttcggc ttcatctact
     1621 tcgccatgct tgatacgatg aatccgacca tcatcttcat tgcgatttcg atctcgttgc
     1681 tgccggtgat gacgctctat ggacccgagg cggcgctgat cgccgaatcg ttctcaccgc
     1741 ggctgcgcta tagcggtgca tcgcttggtt atcagttggc ctcgatcatt gccggcggcc
     1801 catcgccgtt tatcgcgacg gcattgttcg ccagctatca ctcgagttta ccgatcgcga
     1861 tttacatcct gggcactgcg atcgtcggtc tggtggcgac tgctttgctg accgactaca
     1921 ccggcaaaga gatttctgcc gaatacgaaa gcgtctgaac ggcatgggtg ggcggcgcac
     1981 tcatggcgcc gcccgctcgt aacatcccaa acgggtggtt cagttcagaa agatcttccc
     2041 cgggttcatg atcccgcgcg ggtcgatggc ctgcttcacc gaatacatca ccgcaagcgc
     2101 atcctggccg tgctcgcgct ccaggaattc gcgtttgccg atgccgaccc cgtgctcgcc
     2161 gctgcacgat ccgccgagtt cgagcgcgcg ggcgacgatc ttcttgtcca gttcccaggc
     2221 tcgggccagt ccgtcaggct cgggcggcac caggatcacg gtatggaaat tgccgtcccc
     2281 gacatgaccg acaatcggcg cggtcaggcc ggatgcggcg atatcttcct tggcgccaag
     2341 gatggcttcg ttgagacgag agatcggcac gatcgcatcg gtggcgatgc cctgatggcc
     2401 gggcttcaat gcgagacagg cccaatacgc gtcatgccgt gcctgccaca gttggttccg
     2461 ctcggcggta tcggtcgccc accggaagcc gcttccgttg cactcccggg cgatgtcctc
     2521 ggtttgttgc gcctgctcct gcacgcctgc gggcgtccca tggaactcga aaaacaaact
     2581 gggcagacgc tgcaagccgg ttaacttcga ataggcgatg ctggcttcga cctgcacctc
     2641 gtccagcagt tccatgcggg caaccgggat gccggtttgc atgatggcga tcacggtttc
     2701 gaccgcgtcg cgcagcgtgg ggaactggca ggtggcggac gacatcgcct cggggatgcc
     2761 gtgcaggcgc agttggattt cggtgatgac gcccagggtg ccttcggagc cgacgaagag
     2821 ccgggtcag
//
LOCUS       DATAVD010000388         4059 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3013635, whole genome shotgun sequence.
ACCESSION   DATAVD010000388 DATAVD010000000
VERSION     DATAVD010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4059
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3013635"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..772
                     /locus_tag="VHX39_07185"
     CDS             <1..772
                     /locus_tag="VHX39_07185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990939.1"
                     /translation="LGQFAPAIAAADELIETMPEAFLRIPSPPMANFFEAYVAIRLHV
                     LIRFGKWQEIIAQELPADAELYCNTVAMMHYAKGVAHAALGDVPAAEAEQKLFREAAI
                     RVPESRYIHNVACVKLLAIAEQMLDGEIAYRRGEHDAAFAHLRAAIALEDDLPYDEPW
                     GWMQPVRHALGALLLEQGRTAEAEEVYREDLGLGGTLPRAQIHPDNLWALRGLLDCLE
                     RRGEKAEAALIRQRVEFAAARADLPVAVSCFCARGEAA"
     gene            884..2614
                     /gene="ilvD"
                     /locus_tag="VHX39_07190"
     CDS             884..2614
                     /gene="ilvD"
                     /locus_tag="VHX39_07190"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEX3990940.1"
                     /translation="MPTRSWDKSHMPSRHVTVGPGRAPHRSYYYAMGLTEAEIDQPFV
                     GVATCWNEAAPCNIALSRQAQSVKKGVAETGGTPREFTTITVTDGIAMGHQGMKSSLV
                     SRDLIADSVELTMRGHCYDALVGLAGCDKSLPGMMMAMLRLNVPSVFMYGGSILPGKF
                     KGRDVTVVDVFEAVGMHSAGHMSDEDLHELECIACPSAGACGGQFTANTMAMVSEAIG
                     LALPGSAGSPAPYEERDRFAVESGRAVMALLASKLRPRDIVTRKALENAAVVVGATGG
                     STNGALHLPAMAHEAGIRFTMDDVVEIMRRTPYIADLKPGGKYVALDVHRIGGIPVVL
                     KALLDGGLLHGDCMTVTGKTMAENLKDVVFPTDQDVIYPVSKPISQTGGVVGLKGNLA
                     PDGAVVKIAGLEELRFEGTALCFDSEEEAFEAVRLRAYKPGDVIVVRYEGPKGGPGMR
                     EMLSTTAAIYGQSEHKGKEVALITDGRFSGATRGFCVGHVGPEAALGGPIALLKNGDR
                     IVIDATKGTIDVMLSDAELAARRAAWQPRRTDYNSGAIWKYAQLVGPAHLGALTHPGA
                     ESETHCYADI"
     gene            2682..3059
                     /locus_tag="VHX39_07195"
     CDS             2682..3059
                     /locus_tag="VHX39_07195"
                     /inference="COORDINATES: protein motif:HMM:NF016056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DCC1-like thiol-disulfide oxidoreductase family
                     protein"
                     /protein_id="HEX3990941.1"
                     /translation="MITKLTVWYNTKCPVCNAGINWQKSRLVAAARSGAIEYRDINVE
                     PDALAHFGASVNDVRRRLHGVDADGQFYAGIDCAIAIWQRTPGDGWLARVIGVPGIRQ
                     IAGFGYDRFADLLYAWNRWKRHW"
     gene            3395..3721
                     /locus_tag="VHX39_07200"
     CDS             3395..3721
                     /locus_tag="VHX39_07200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990942.1"
                     /translation="MPDGDPEKPVYATMAALRAPNFAALRIGLTEGGQVVVEVEHRKL
                     VTPFITNDIENPGEFAKIQKGFRQIIEHFERMAGIARHGLFGRFASDPDYRKVAERRL
                     AAIRAG"
     gene            complement(3730..>4059)
                     /locus_tag="VHX39_07205"
     CDS             complement(3730..>4059)
                     /locus_tag="VHX39_07205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990943.1"
                     /translation="PWAGDYIYSRDVAAGLVRIADAPALSRAVYNLGSGQAVTAIGWC
                     TALAPLIPGFRWRSAAAGEAYNVESHTGFDRGAFDISKIAAESGFAPKFDFNSAPKDY
                     LNWLNAA"
BASE COUNT          751 a         1190 c         1349 g          769 t
ORIGIN      
        1 cctcggtcag ttcgcgcccg ccatcgctgc cgccgacgag ttgatcgaaa ccatgcccga
       61 ggcgttcctg cgcattccct cgccgccgat ggcaaatttc ttcgaggcat acgttgccat
      121 ccgcctgcac gtgctgatcc gtttcggcaa atggcaggag atcatcgcgc aggaactgcc
      181 ggcggacgct gagctttatt gcaacaccgt ggcgatgatg cattacgcca aaggcgttgc
      241 gcacgccgct ctgggtgatg tgccggcggc ggaggccgaa cagaagctgt tccgcgaggc
      301 cgcgatccgt gtgccggagt cgcgatatat ccacaatgtg gcctgcgtga agctgctcgc
      361 catcgccgaa caaatgcttg acggcgagat cgcctatcgg cgtggcgagc acgacgcggc
      421 attcgcgcat ctgcgagccg ccatcgcgct ggaagacgat ctgccgtacg acgagccctg
      481 gggctggatg cagccggtcc gccacgcgct tggtgcgttg ttgttggagc agggccgcac
      541 cgcggaggcc gaggaagtgt atcgcgaaga tctcggcctt ggcggcactc tgccgcgagc
      601 acaaatccac ccggataatt tgtgggcctt gcgcgggctg ctcgactgcc tcgagcggcg
      661 cggggagaaa gcggaagcgg cgctgatccg ccagcgcgtg gagttcgctg cggcgcgggc
      721 cgacctgccg gtagcggtgt cctgtttctg cgcccgtggc gaagccgcct gagccaccgg
      781 ctgccgtcgc aattgtatct atggcctgga tccgggtcag acacctggcc ccttgcggcc
      841 agccgtgata acccacgccg acgatcacag aaggaaaccc gccatgccaa cccggtcctg
      901 ggacaaatcc cacatgccgt cccgccatgt cacggtggga cccggccgtg cgccgcatcg
      961 ttcgtactac tacgcgatgg gcctgaccga ggcggaaatc gatcaaccct tcgtcggcgt
     1021 tgccacctgc tggaatgagg ctgcgccatg caacatcgca ctcagccggc aggcgcagtc
     1081 ggtgaagaaa ggcgtggccg agaccggcgg cacaccgcgg gagttcacca ccattacggt
     1141 caccgacggc attgcgatgg ggcatcaggg gatgaagtcc tcactggtgt cgcgcgacct
     1201 gatcgctgac tcggtggaac tgaccatgcg cggtcattgc tatgacgcat tggtcggtct
     1261 ggccggctgc gacaaatcgt tgccgggcat gatgatggcg atgctgcggc tgaatgtgcc
     1321 cagtgtgttc atgtatggcg gctcgatctt gcccgggaag ttcaagggcc gtgatgtgac
     1381 tgtggtcgat gtgttcgagg cggtcggcat gcactcggcc ggtcacatgt cggatgagga
     1441 cctgcatgaa ctggaatgca ttgcctgccc ctcggccggc gcctgcggcg gtcagttcac
     1501 cgccaacacg atggcgatgg tcagcgaggc catcggtctc gcactgccag gttcggccgg
     1561 ctcaccggcg ccgtacgaag aacgcgaccg tttcgctgtg gaatcgggcc gcgcggtgat
     1621 ggcgctgttg gccagcaagc tgcggccgcg cgatatcgtg acccgcaagg cgttggagaa
     1681 tgccgcggtt gtcgtcggtg cgacaggcgg atcgaccaac ggcgcgctgc atctgccggc
     1741 gatggcgcat gaggcgggca ttcgtttcac catggacgat gtggtggaga tcatgcggcg
     1801 taccccatac atcgccgacc tcaagccagg cggcaaatac gtggcgctgg atgtgcaccg
     1861 catcggcggc attccggtgg tgttgaaggc gttgctggat ggcggcttgt tgcacggcga
     1921 ttgcatgacc gtgaccggca agaccatggc cgagaacctg aaggacgtgg tgttcccgac
     1981 cgatcaggat gtcatctatc cggtgtcgaa accgatttca caaaccggcg gcgtggtcgg
     2041 gttgaaggga aacctggcgc cggacggagc tgtcgtgaag atcgccggtc tggaggaact
     2101 gcgcttcgag ggcaccgcac tgtgcttcga ctctgaggag gaggcgttcg aagccgttcg
     2161 cctgcgcgcg tacaaacctg gcgatgtgat cgttgtgcgc tacgaaggtc cgaaaggcgg
     2221 cccaggaatg cgggagatgc tgtcgacgac ggcagcgatc tatggccaga gcgagcataa
     2281 gggcaaggaa gtcgcgctga tcaccgatgg ccggttctca ggcgcaacca gagggttctg
     2341 tgttggccat gtcggaccgg aagcggcgct tggcgggccg atcgcgctgc tgaagaacgg
     2401 cgatcgcatc gtcatcgacg ccaccaaagg caccatcgac gtgatgcttt cggatgcgga
     2461 actggcggct cggcgcgctg cgtggcagcc ccggcgcacc gattataatt ccggtgcgat
     2521 ctggaaatat gcgcaactgg tgggaccagc gcatctggga gcattgacgc atccgggcgc
     2581 cgagtcagag acccattgtt acgcggatat ttgacggcat cctgtctgcg ccgcaccggt
     2641 tggaattctg ccccggcgtt gcctgggccg agcggaatgg aatgatcacc aaactcaccg
     2701 tctggtacaa caccaaatgt cctgtctgca acgccggcat caactggcag aaaagccggt
     2761 tggtggcggc ggctcggtcg ggtgcgattg aatatcgcga catcaatgtt gaaccggatg
     2821 ctctggctca cttcggagcg agcgtgaatg atgtgcgtcg ccggctgcat ggcgttgatg
     2881 cggacgggca attttatgcc gggatcgatt gcgcaatcgc catatggcag cgaaccccgg
     2941 gcgatggctg gctcgcgcgg gtgattgggg tgcctgggat ccgccagatc gcgggcttcg
     3001 gctacgatcg gtttgccgat ctgctctatg cctggaaccg gtggaagcgg cactggtaat
     3061 atcggcgtgc ccaagaaatg ggcgggtggt caggggcaag gaacttgtaa ccgcggtcgg
     3121 gcgttactct gccctgtggg ccgcaccttg ccggtgctcc atacacgggt tacggttggc
     3181 cgcctgggta agcccacggg cttgctgcgg caatgccgat gaagtgctgt cgagggtagt
     3241 ggatatgggt gcaacgcctg gtcacgaccg atccgatgat cccttccggg accagttcgt
     3301 cctctccttg aaagaggtgc ttcaggcgta cgcaacggct accccgggat tcgatcatga
     3361 taaacggtcg cgctgggcgt acgcttttaa cccattgccc gacggcgatc cggagaagcc
     3421 ggtttacgca acgatggccg cgctccgagc gcccaatttt gcggcgttac gcatcggcct
     3481 gaccgaaggc ggccaggtcg tggttgaagt cgaacaccgg aagttggtga ctccgttcat
     3541 taccaacgat atcgaaaacc ccggcgagtt cgccaaaatt cagaaggggt tccgacagat
     3601 catcgagcat ttcgaaagga tggccggcat cgcgcgccac ggtcttttcg gtcgctttgc
     3661 gtctgatccg gattatcgga aagttgccga gcggcgcctc gctgccatcc gggccggctg
     3721 aatcacattt caggcggcgt ttagccaatt taagtaatct ttgggcgccg agttaaaatc
     3781 gaactttggt gcgaagcccg actcagccgc gatcttgctg atatcgaatg cgccgcgatc
     3841 gaaaccggtg tggctttcta cgttatacgc ctcacctgcc gcggcggacc gccagcgaaa
     3901 tcccggaatc aacggtgcca atgcggtgca ccatccgatc gcggttaccg cctggccgga
     3961 gccgagatta taaaccgcgc gagacaacgc cggtgcgtcg gcgatccgca cgagaccggc
     4021 agcgacatcg cgcgagtaaa tgtaatcgcc ggcccaggg
//
LOCUS       DATAVD010000389         1610 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_408293, whole genome shotgun sequence.
ACCESSION   DATAVD010000389 DATAVD010000000
VERSION     DATAVD010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1610
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408293"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..874
                     /locus_tag="VHX39_07210"
     CDS             <1..874
                     /locus_tag="VHX39_07210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990944.1"
                     /translation="FGAAAALDAPVRQTFVGELVGDEYLPKAVALNSTSFFAGQMIGP
                     AVAGLVIAKIGTGWAFLMNGLSFGAVLLSMYLLRVQDLRTNARASRAAGGFVEGLRYV
                     WARPDLRSIVVMLFLIGTFGLNFPIFISTMAVSVFHTDARGFGLLSSIMAVGTISGAL
                     LAAGRDRPKFGTLLAGSAVFGVGCTLAAFSPGYWWFAAALAVIGGAALTFTTATNSMM
                     QLSTKPTMRGRVMAIRVGVALGGTAVGAPIVGWVADRFGPRWSLGLGAISAFLAALVA
                     ASIMTKAVAVPLDA"
     gene            complement(901..>1610)
                     /locus_tag="VHX39_07215"
     CDS             complement(901..>1610)
                     /locus_tag="VHX39_07215"
                     /inference="COORDINATES: protein motif:HMM:NF015948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF362 domain-containing protein"
                     /protein_id="HEX3990945.1"
                     /translation="LGNYKQYVRTKVPWGGYAYPAYHLNPAFYQCDVYASMAKLKNHW
                     IAGVTMTMKNNFGNTPCALYGGDCGPSGNERPTKERGPVLHDGTTPAPSGVDAELHPD
                     SPRDPGYRVPRILVDQNGIRPIDLAIVDGVETVRGGEGPWLPGLERMTPGVIIAGRNA
                     VNVDAVGMAVMGYDPYAERGTSPFIRGDNSLRLAEEAGIGTRNLKRIEVVGVSIKDAH
                     INFGPGAVGKKMSELKS"
BASE COUNT          256 a          466 c          521 g          367 t
ORIGIN      
        1 ctttggggct gcggcggcgc tggatgctcc cgtgcggcaa acctttgttg gggagctggt
       61 gggtgacgaa tacctgccca aagcagtcgc gctcaactca acctcgttct ttgccggcca
      121 gatgatcggc ccggctgtgg ccggtctggt gattgccaag atcgggaccg gctgggcatt
      181 tctcatgaat ggactctcct ttggcgctgt cctgctgtcg atgtatcttc tgcgcgtaca
      241 ggatctcagg accaatgcga gagcttcgcg tgcagcgggc ggtttcgtcg aaggacttcg
      301 ctatgtatgg gcgcgaccgg acctccgatc catcgtggtc atgctctttt tgattggaac
      361 attcggttta aatttcccaa tcttcatctc caccatggcc gtgagtgttt tccataccga
      421 cgcgcgcgga ttcggtttgc tgtcgtcaat catggcggtc ggcaccatca gcggagcgct
      481 gctggcagca ggacgcgaca ggccgaagtt tgggacgcta ctggcggggt ccgcggtctt
      541 tggggtcggt tgcaccttgg ctgcgttctc tcccggatac tggtggttcg ccgcagccct
      601 ggctgtgatc gggggagcgg ccctcacctt tacgacggcg acgaacagca tgatgcagct
      661 ttcgaccaag cccaccatgc gcggccgggt gatggcgatt cgtgtgggtg tggcgctggg
      721 gggaaccgcg gtgggggctc ctattgtcgg ttgggtagcg gatcgtttcg gcccgagatg
      781 gtcgctcggt ctcggcgcga tttccgcgtt cctggcggcg ctggtcgcag catcgatcat
      841 gacgaaagct gtggctgtgc cgctagacgc ctagatacat cgtcgggccg ggtgggcgat
      901 ctaggatttc agttcgctca tcttcttgcc aaccgcgcct gggccgaaat taatgtgagc
      961 gtccttgatc gacacaccga ctacttcgat acgcttcagg ttccgggttc cgatgccggc
     1021 ttcttccgcc agacggagcg agttgtcgcc gcggatgaac ggggaagtac cccgctccgc
     1081 atagggatcg tagcccatga cggccatccc gacggcgtct acgttcacgg cgttgcggcc
     1141 ggcgataatc acgcccggtg tcattctttc caggcctggt agccaggggc cttcgcctcc
     1201 ccggacggtt tcgaccccat ccacgatggc gagatcgatg ggccgaatac cgttctgatc
     1261 gaccagaatg cgcggaaccc gatagcccgg atcgcgcggc gaatcaggat gtaactcggc
     1321 atcgactccc gagggcgcag gggttgttcc gtcatgcagt acggggccgc gttctttcgt
     1381 cgggcgctcg ttaccgctgg ggccgcagtc cccgccatag agggcgcagg gcgtgttgcc
     1441 gaagttgttc ttcatcgtca tggttacgcc ggcaatccaa tgattcttca gcttggccat
     1501 cgaggcgtat acgtcacact gatagaacgc cgggttgagg tgataggcgg gataggcgta
     1561 gccaccccag ggcactttcg tgcgcacata ctgcttgtag ttgcccaggt
//
LOCUS       DATAVD010000390         4365 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1898805, whole genome shotgun sequence.
ACCESSION   DATAVD010000390 DATAVD010000000
VERSION     DATAVD010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4365
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1898805"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..493)
                     /locus_tag="VHX39_07220"
     CDS             complement(<1..493)
                     /locus_tag="VHX39_07220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015074355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEX3990946.1"
                     /translation="MKEFTYARAHSPAQAATIAAASGTKVIAGGTNLLDLMKLQIETP
                     SQLVDINRLPLDRIEDTPDGGLRIGTLVRNSDLAADQRVRTRYGVLSRALLSGASAQL
                     RNKATTGGNLLQRTRCMYFYDTTKPCNKRTPGSGCAALAGFNRMNAILGGSDQCIAVH
                     PSDM"
     gene            complement(490..1146)
                     /locus_tag="VHX39_07225"
     CDS             complement(490..1146)
                     /locus_tag="VHX39_07225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX3990947.1"
                     /translation="MYDNENRQGAVTRRVVLEVGTAASAVLISGRPSSALAADVPNPQ
                     PPAPPVTVELLINGHEHSVSLDPRTTLLDALREHLALTGTKKGCDHGQCGACTVLLEG
                     RRINSCLTLAVMHDGQAITTIEGLADGARLQPLQALFVAHDGFQCGYCTSGQICSATG
                     MLSEHQAGMPSLLTADLATPRPELTEAEIRERMSGNICRCGAYPNIVAAIKQAAEIPA
                     "
     gene            1779..3284
                     /locus_tag="VHX39_07230"
     CDS             1779..3284
                     /locus_tag="VHX39_07230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEX3990948.1"
                     /translation="MRTIGSRRGFLGSTFAAGILASAHSAASPVPRRLIVGTRVLEVN
                     GRPAKVFGLLGPDGRSGIDLAPGERFRIGLANEAGVPTLIHWHGQLPPWKQDGFPWPE
                     TPPIANGVVQDYDYVPIAGTYWMHSHHDLQEQRLMVAPLIVHDNATLLEDWQEVVLLL
                     HDFTFRSPDEVLAGLTGTGVADVMARNAAGGDERTGGRTLPLSGAGDMLAMPGSRMAM
                     AGKDMSRPAAMRMDLNDVRYEAFLANDRTLADPEIVRVERGGRVRLRIINGASSSQFW
                     IDLGALNGRVVATDGHPVHPVTGNRFPMAIAQRLDILIDLPSSGVFPVLARLEGAGRQ
                     TGIVLATAGARIPLFADNSQTNPPVDNSLEIRLAAANPLSVRPADLVHTIALGGQMKP
                     YAWSMNGEYWPHVAPLMLSEGQRVEIELVNHTMMAHPIHLHGHTFQVIAINGQPVLGA
                     VRDTVLVPPMMGRVRIAFDADNPGRWAIHCHNLYHMVTGMMTEFRYQGVAI"
     gene            3349..3705
                     /locus_tag="VHX39_07235"
     CDS             3349..3705
                     /locus_tag="VHX39_07235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016246488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX3990949.1"
                     /translation="MLDWNEYRNKLTAGVKEVGQLSPDTIKGYLELSSAGQKKDLLGA
                     KFRELIALAVAVTARCDGCITVHTEAAIRQGATKEEIVEALGVAVAVNAGAALVYSTR
                     VMDAVKEYPGAAPLPK"
     gene            complement(3895..4239)
                     /locus_tag="VHX39_07240"
     CDS             complement(3895..4239)
                     /locus_tag="VHX39_07240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990950.1"
                     /translation="MAEDLDKAGGDISKALRTGIWIQFVCHVQGPIGSRQRIGPPDGP
                     GAIAGIDFPAVQQSLEGYGELSQIASPMYRFFPPDASLLEFAFLDHGCNSDKSRWNRS
                     AMPQLENYGLID"
BASE COUNT          856 a         1289 c         1304 g          916 t
ORIGIN      
        1 ccatgtcgga cggatgcacg gcgatgcatt ggtcgctacc accgagtatg gcgttcattc
       61 ggttgaaacc ggccaatgct gcgcagccgg aaccgggtgt gcgcttgtta cacggctttg
      121 tcgtgtcata aaaatacatg cagcgtgtcc gctgcagcag gttgccgccc gtggtggcct
      181 tgttccgaag ctgtgcactg gcacctgaaa gcaaggcacg gctcaggaca ccatagcgcg
      241 tacgtacgcg ctgatcggcc gcaaggtcgc tgttgcgcac caacgtgccg atccgaagtc
      301 cgccgtccgg tgtatcctcg atcctgtcga gcggcagcct attgatatcg accaattgcg
      361 acggtgtctc tatctgcagt ttcatcaggt cgagcagatt ggttccgcca gcaatgactt
      421 tcgttccaga tgcggccgcg atagtcgccg cctgcgccgg ggaatgggcg cgcgcgtaag
      481 taaattcctt catgctggta tctccgccgc ctgcttgatc gccgcaacga tgttcgggta
      541 ggcaccgcag cggcagatat tgccgctcat gcgttcgcgg atctccgcct cggtcagttc
      601 cggtcgtggc gttgccaggt cggcggtcag caggctcggc atgccggcct gatgctcgct
      661 cagcattccc gtcgcagaac agatctgacc ggacgtgcaa tagccgcatt ggaagccgtc
      721 atgcgcgacg aacaaggcct ggagcggttg aagtctggcg ccgtccgcaa ggccctcaat
      781 tgtcgttatg gcctgtccgt catgcatcac ggcaagcgtc aggcaagagt taatgcgacg
      841 tccttccaac agaacggtac acgctccgca ttgaccgtga tcgcaacctt tcttcgtgcc
      901 ggtcagggcc agatgctcac gcagcgcgtc aagcagggta gtacgcggat cgagggatac
      961 actgtgctca tgaccgttga tcagcagttc gacagtcacc ggcggagcgg gtggttgcgg
     1021 attgggcacg tcggcggcaa gcgctgatga tggtcggccc gaaatcagga cggccgatgc
     1081 cgcggttccg acttccaata cgacccgacg cgtcaccgca ccctgtctgt tctcgttatc
     1141 gtacataaat gctcctgttg cgttgttcga ttgccttcga tacttggccg cacagtcctg
     1201 tggcgattca tcagcgtttc ggtcggatta agtccgtgac atgcggtaca gcgagaaaga
     1261 aacgaacctt tgtctgtctg gttgccgaga tcatacatgt gaccctcgga tccggttcca
     1321 attatcggca attcctgcat gagacttatg cacgggaaga tgggatcatg aacctgaatc
     1381 aggtcagttg agctgtttgc tcaccaggcg ataacttaca ggtcattgga taatttcgct
     1441 gtttaaggtt tcggcgatcc atccattgaa tcgcgtcctg gcccggttgg actcacccgt
     1501 gcagcctggc tccatgcata gtctcatgaa aactcacccg gcttccaagg atttctcagt
     1561 cgctcagggg taaattccga accacgacat gacgcgacca atgaggcgcc gcggctgagc
     1621 cgtccgggcc ttcggcgagg tttgtttgag cgtttgacac acttcctgtt tcaggacagc
     1681 agcatcatgc gattcgaccg aatgcatcgt cgccatcgtg agtccacagt gcgtgtcagc
     1741 cacatccatc atggcgatat gacagacggg agacggccat gaggacgatc ggctcccgcc
     1801 gcggttttct cggcagcacc ttcgccgccg gtatcctggc gtccgcgcat tccgcggcat
     1861 cgcccgtgcc caggcggctc attgttggaa cgcgcgtact cgaggtgaat ggacgaccag
     1921 ccaaagtctt cggcctgctc ggacccgacg gacgttcagg catagatctc gcaccaggtg
     1981 agcgattccg catcggactc gcgaacgagg ccggtgtgcc aaccctcatt cattggcatg
     2041 ggcagcttcc gccgtggaag caggatgggt tcccatggcc tgaaacacca ccgatcgcga
     2101 acggcgttgt ccaggattac gactacgttc caatcgccgg cacctattgg atgcactcgc
     2161 atcacgactt gcaggaacag cgcctgatgg tcgcaccact tattgtccac gataacgcga
     2221 cgctgcttga ggactggcag gaagtcgtgc tgttgctgca cgattttacc ttccgatcgc
     2281 ctgacgaggt actcgcgggc ctcaccggga ccggcgtggc agatgtcatg gcgcgaaacg
     2341 ccgcaggtgg cgatgagcgc acgggcggcc gcactttgcc gctttcgggc gctggagaca
     2401 tgctggccat gccgggctcg cgcatggcca tggccgggaa ggatatgtcc cggccggcag
     2461 cgatgcggat ggatttgaat gacgttcgct atgaggcctt cctcgccaat gatcgaaccc
     2521 tcgccgatcc ggagatcgtg cgcgtcgagc gaggcggccg ggtcaggctc cgcatcatca
     2581 acggtgcgtc ctcaagccag ttctggatcg atctcggtgc gctgaacggc cgcgtggtcg
     2641 cgaccgatgg gcatccagta cacccggtaa ccggaaaccg ttttccgatg gcgattgcgc
     2701 aacgacttga catcctgatc gatctgccca gctctggcgt ttttcccgtt cttgctcgac
     2761 tggaaggcgc gggccggcag accggaattg tcctcgccac tgcgggtgcg cgaattccgc
     2821 tgttcgcgga taattcgcaa acgaacccac ctgtcgacaa ttcgcttgag atccggcttg
     2881 ccgcggcgaa tccactgtca gtgcgcccgg cggatcttgt tcacacgatt gctctcggcg
     2941 gccaaatgaa accctatgcc tggtccatga acggcgaata ctggccgcat gttgcgcccc
     3001 tgatgttaag cgaggggcag cgcgtggaga tcgagctggt caaccacacg atgatggcgc
     3061 acccgattca tctgcacggc cacacgttcc aggtgatcgc gatcaacggc cagccagtac
     3121 tgggcgccgt tcgcgacacc gtgctcgtgc cacccatgat gggccgcgtc cggatcgctt
     3181 ttgatgccga caatccgggg cgatgggcga tccattgcca caatctctat catatggtga
     3241 ccggcatgat gacggagttc aggtatcagg gagtcgccat ctgatggtcg ggctccaaga
     3301 ccgcagtctt tggcaatgtc ccacgctcgc aacggaggca ctcacatgat gctggactgg
     3361 aatgaatatc gcaataaact gacggccggt gtgaaagaag tcggccaact cagtcccgac
     3421 acgatcaagg gctatctcga actcagttcg gccggccaga agaaggattt gctcggtgca
     3481 aaattccgcg agctgattgc tcttgcggtt gccgtgacgg cgcggtgcga tggttgtatc
     3541 acggtccata ccgaggccgc cattagacag ggcgcgacca aggaggagat cgtggaagct
     3601 cttggcgtcg cggtcgcggt caatgcggga gcggctctcg tatactccac gcgtgtgatg
     3661 gacgcggtca aggaatatcc gggcgccgca ccgctgccta aatgaggcgt cctcagcagg
     3721 ccgcacgcgt ggaccggtgc cggattggag catccccatt gttccatagg tccggcgttt
     3781 cgcacagcag gcccgacatg ttgttcgtcc cacttaacag cttcgaaccg gtggatgatg
     3841 catgcaccaa ccatggatca tctcatgaaa actcaacgag gtcccaagga cttctcagtc
     3901 gatcaggcca taattctcca attgaggcat ggcagatcgg ttccaccggc tcttatcgga
     3961 gttgcaacca tggtccagga aagcaaattc cagcagcgac gcgtctgggg ggaagaagcg
     4021 atacatcggg ctggcaattt gcgacagctc gccatatccc tccaacgatt gctggacagc
     4081 gggaaaatcg ataccggcga tcgccccagg accatcaggc gggccaatgc gctggcgcga
     4141 gcctatcgga ccttggacat ggcagacgaa ctggatccat attcctgtgc gcagggcctt
     4201 agagatatcg ccgccggcct tgtcgagatc ttcggccata ccgtaggttc gctggtatta
     4261 tctttggatg tccaaccgtt gtcgctgcca ggagaagggc gccgggcgtt gctgctcgcg
     4321 gtatccgaac tcgtgatcaa tgcgctgcgc cacgcgttca tcgac
//
LOCUS       DATAVD010000391         2188 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3387386, whole genome shotgun sequence.
ACCESSION   DATAVD010000391 DATAVD010000000
VERSION     DATAVD010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2188
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3387386"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..945
                     /locus_tag="VHX39_07245"
     CDS             106..945
                     /locus_tag="VHX39_07245"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX3990951.1"
                     /translation="MRPNRFRALLNANQPTIGTHLLSTWPTLVELVGQAGNYDYVEFT
                     AEYSPFDMHDLDNLGRALELKDLAGMIKVEQTQWTHQAMRAIGSGFQSILFADLRSVA
                     DAHACVAAVRAETPGTGGRLGVGMRRDVGTVRDGGSPAYVDALNEVVIAIMVEKRECV
                     EDLDAILSVKGIDMVQFGSSDYSMSLGLTGQRSHPDVKAAERKTIEMALKKGLHPRVE
                     LANIKDAAPYLEMGVKHFCIGWDVRVLHEWWRVNGEGMRAMLDANGGGAAVARPKETA
                     SSY"
     gene            1154..1687
                     /locus_tag="VHX39_07250"
     CDS             1154..1687
                     /locus_tag="VHX39_07250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEX3990952.1"
                     /translation="MPMRLVFIYGQVASGKLTIGRELAALTGLPLFHNHLVVDAVSAV
                     FPFGSEPFVGLRERLWLEVIAEAATAGRSIIFTFAPESTVDESFPERVRALVRNRGGE
                     VLFVRLLVAPDEQERRLMDPSRTAFGKLRSPELLRCLREDFARCMAVMPAADVTIDTG
                     TLEPRIAAGQIADLITP"
     gene            complement(1807..>2188)
                     /locus_tag="VHX39_07255"
     CDS             complement(1807..>2188)
                     /locus_tag="VHX39_07255"
                     /inference="COORDINATES: protein motif:HMM:NF020922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2461 family protein"
                     /protein_id="HEX3990953.1"
                     /translation="PGLFYIHIEPARCFVAACFWHPEPPMLDRLRQQIIATPDRFLKL
                     VRALDAKGMPLEPDGEGTKRLPRGCEAAKDTPIEPFLKHRNLIVRHALADADVFAPSL
                     PTRLLERFTAARPLLDFGWAAVDG"
BASE COUNT          379 a          604 c          769 g          436 t
ORIGIN      
        1 cacctaagaa atctgccgcg acagtttcgg cctgctccag cacttgcgcg ctcgtcgcag
       61 aaccccgacg atgtcccgac cccaacccgc aaagggaata ccgacatgcg tccgaaccgt
      121 ttccgcgctc tgctgaacgc caatcagccc acgatcggca ctcatttgct gtccacctgg
      181 ccgacgctgg tggaactggt ggggcaggcc ggcaactacg actatgtcga gttcaccgcc
      241 gaatactcgc cgttcgacat gcatgacctc gacaatctgg gccgggcgct ggaactgaag
      301 gacctggccg ggatgatcaa ggtcgagcag acgcagtgga cgcatcaggc gatgcgggcg
      361 atcgggtcgg gcttccagag catcctgttt gccgatctcc gttcggtggc ggatgcgcat
      421 gcctgtgttg cggctgtccg agcggagacg ccggggacgg gcgggcgtct tggggttggg
      481 atgcggcgcg atgtggggac ggtgcgggac ggcgggtctc cggcttatgt cgatgcgctg
      541 aatgaggtcg tgattgcgat catggtcgag aagcgagaat gcgttgagga tctggatgcc
      601 atcctgtcgg tcaagggcat cgatatggtg cagtttggtt cgtcggacta ctcgatgagc
      661 ctcgggctga ccggccagcg cagccatccg gatgtgaagg cggcggagcg gaagacgatc
      721 gagatggcgc tgaagaaggg gctgcatccg cgggtggaac tggccaacat caaggacgcg
      781 gcgccgtatc tggagatggg cgtgaagcat ttctgcatcg gctgggatgt ccgcgttctg
      841 cacgaatggt ggcgagtgaa tggcgagggc atgcgggcga tgctggatgc caacggcggt
      901 ggcgccgcgg tggcccgccc gaaggaaacc gccagcagct actagaccag gggttcgccg
      961 ggggccggcg atcccgctcg gggtaaccgg ctggatttcg atacgcgggc gttctggatt
     1021 tatcgtggga ttttgccgta acgattttct cggaagaatc ggctgatcaa cgaattctgt
     1081 aacggctttg ctggctaaca gtggccggca atcggtgtcg aggatggaaa gcagccgcaa
     1141 ggcgcgctaa tttatgccga tgcggctcgt gttcatctat ggccaggtag cctcgggaaa
     1201 actgacgatc gggcgggaac tcgcggcgct taccggtctg ccgctgtttc acaatcattt
     1261 ggtcgtggac gcggtgagcg cggtctttcc gttcggatcc gaaccttttg ttggtttgcg
     1321 cgaacgcctt tggctggagg tcatcgctga agcggcgacc gctggccgtt caatcatctt
     1381 caccttcgcg cctgagtcga cagtcgatga aagctttccg gagcgggtgc gtgccctggt
     1441 gcggaatcgt ggaggagagg tcctcttcgt tcgattgctg gtcgctcccg acgaacagga
     1501 gcgccgcctt atggacccca gccgcaccgc gttcggcaag cttcggtcac ctgaattgct
     1561 ccggtgttta agggaagatt ttgcgcgctg catggcggtg atgccagcgg ctgacgtgac
     1621 gatcgacacg gggacgcttg agccacgcat tgccgcagga cagatcgccg acctcataac
     1681 gccttaggat cgctgaccgt ttgcgttttc gccgttgatc agacgttggg tagaaggcgt
     1741 ggctctgggc agctacggcg cacgaatggc tggccggcgt ttcctggttc gaatgctgcc
     1801 tggcggtcat ccatccaccg ccgcccagcc gaaatccagc agcggtctgg cggcggtgaa
     1861 acgttcgagc aggcgcgtcg gcagggaggg ggcgaagacg tcggcgtcgg ccagtgcatg
     1921 cctgacgatc aggtttcggt gtttcaggaa cggctcgatg ggcgtgtctt tggcggcctc
     1981 gcagccgcgc ggcaggcgtt tcgtgccctc cccatccggt tccagcggca tgcccttggc
     2041 gtcgagtgct cgcaccagtt tcaggaaccg atcgggggtg gcgatgatct gctggcgcaa
     2101 ccggtcgagc atgggtggtt cggggtgcca gaagcaggcg gcgacgaagc agcgggccgg
     2161 ctcgatgtgg atgtagaaca ggccgggg
//
LOCUS       DATAVD010000392         2116 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2083114, whole genome shotgun sequence.
ACCESSION   DATAVD010000392 DATAVD010000000
VERSION     DATAVD010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2116
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2083114"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            271..1035
                     /locus_tag="VHX39_07260"
     CDS             271..1035
                     /locus_tag="VHX39_07260"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX3990954.1"
                     /translation="MASFDAPTAIESFWAARARGEWFPAAWQNKLSTAQAYEVLFGLM
                     ARRLAAGERQIGWKVGLTSKAIQQQFNVHEPVFGCILESQPSGHVFASGDLISPGFEN
                     ELCLRLGKDLSGSITPDDARAAIDVAYPSLEIIETRGNLTEQLALALADNAQQKTVIL
                     GSPVKLPAQLEAVEARVIINGEVVATGTGDAVLGNPLNSVVWLAAKLGEFGRSLKAGE
                     IIMSGSFTRQFPIRPGDSIRCEFSGIGAVETSMTTA"
     gene            1032..2063
                     /locus_tag="VHX39_07265"
     CDS             1032..2063
                     /locus_tag="VHX39_07265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX3990955.1"
                     /translation="MNQIRALQMLSDTDLALRSIDPPPQPGPGEVQLRVRFVGINHID
                     VFGLRGMAFAKRLYPLSVGAEAACEVVSVGEGVTNVAPGDRVVPFSAYTCGKCRQCLR
                     GRDNLCENVLGIRGFHVDGWAQDLTNHPARLMVKIPDTVAMQDAACVAVAYSTVEHML
                     FDNAQLEPGETILIQAGASGIGSIAVKIAKSIGCTVITTVGSDEKAAKVKALGADHVI
                     NYREDRFEGVTRKLTGRKGVDVVFEHVGADTWQGSLLCLKRGGRLVTCGATSGPAATI
                     NLMQLFQQQYRITGSFGSPIAALSRALDRIASGVLPVIDTIYPLDDFRAGVERLAHRD
                     VFGKILVEL"
BASE COUNT          402 a          655 c          659 g          400 t
ORIGIN      
        1 gcagcggtac ctcaggcgga accggaagcc ggcggtgcca ggcgtgcagc tgcggcaagg
       61 atgcagaggt ccgccaatca cgtcgcaccg cacagaacgg ttatggcgat ggcaaacggc
      121 gggctgccgc acatttgagc cgggaatgcc gcggtcgtca gaaaacgacg tgggccccga
      181 accatcgttt agcaccccgc tcttgccatt tccgccggtc cccttatccc ctcccccacc
      241 gtttatctcg gccgcaatcg ggggaggccc atggcaagtt tcgacgcacc aaccgccatc
      301 gaatcgttct gggctgcccg cgcccgcggc gagtggttcc cggcggcctg gcaaaacaaa
      361 ctctcgaccg ctcaggctta tgaggttttg ttcggcctca tggcccgccg gctggccgcc
      421 ggtgaacggc aaattggctg gaaagtcggt ctgacctcca aggccatcca gcagcagttc
      481 aatgttcacg aaccggtgtt cggctgcatt ctcgagtcac aaccgtccgg acatgtcttc
      541 gcctcgggcg atttgatcag cccagggttc gagaatgaat tatgcctgcg gctcgggaag
      601 gatctgtccg gcagcatcac accggatgac gcgcgcgccg ccattgacgt cgcttacccc
      661 tcgctcgaga tcatcgagac gcgcggcaac ctgactgagc aactggcgtt ggcgcttgcc
      721 gacaacgcgc agcagaaaac cgttatcctg ggctcgccgg tgaagttgcc ggcgcagttg
      781 gaagcggtcg aggcacgcgt catcatcaat ggcgaggtcg ttgccaccgg cacgggcgat
      841 gcggtgctcg gcaatccgct caattcggtc gtctggctgg cggcaaaact gggcgaattc
      901 ggacgctccc tgaaggcggg cgaaatcatc atgagtgggt cgttcacccg tcagttcccg
      961 atcagaccgg gcgacagcat acgctgcgag ttctccggca tcggggcggt ggagacgagt
     1021 atgacaaccg catgaaccag atccgcgcct tgcagatgct gtccgatacg gacctcgcgc
     1081 tgcgttcgat cgatccgccg ccgcagccgg gacctggcga ggtgcagttg cgggtccgct
     1141 ttgtcgggat caatcacatc gacgtctttg gcctgcgcgg catggctttc gccaaacgcc
     1201 tttacccatt gtcggttgga gccgaggcag cgtgcgaggt cgtttcggtt ggcgagggcg
     1261 tcacgaacgt cgcgcccggc gatcgcgtgg taccgttctc ggcctatacc tgcggcaaat
     1321 gccggcagtg cttacgcggc cgcgacaatc tctgcgaaaa cgtcctcggc attcgcggtt
     1381 tccacgtcga cggctgggcg caggacctga ccaaccaccc tgcccgactg atggtgaaaa
     1441 tccccgatac ggttgcgatg caggatgctg cctgtgttgc cgtcgcgtat tccactgtcg
     1501 agcatatgct gttcgacaac gcccaattgg agccaggcga aacgatcctg atccaggccg
     1561 gcgcctccgg catcggcagc atcgcggtga agatcgccaa atccatcggt tgtaccgtga
     1621 tcaccaccgt cggcagcgat gaaaaagccg ccaaggtaaa agccctgggc gccgaccacg
     1681 tcatcaacta ccgcgaagac aggtttgagg gcgtaacacg caaactcacc ggtcggaaag
     1741 gcgtcgacgt cgtgttcgaa catgtcggcg ccgatacctg gcaaggctcg ttactgtgtt
     1801 tgaaacgagg tggcaggctg gtcacctgtg gtgcaacctc ggggccggcg gcgaccatca
     1861 acctgatgca gttgtttcag cagcagtacc gaatcaccgg ctcgttcggt tcgccgatcg
     1921 cggcactcag ccgggcactg gaccgcatcg cgagcggcgt gctgccggtg atcgacacga
     1981 tctatccgct cgacgatttc cgagccgggg tggaacgcct ggcgcatcgg gacgtatttg
     2041 gcaaaatcct ggtggaactt taaatccgac aatgaaactt tttatgcggc gggttggcaa
     2101 cggcattgtc ggcggc
//
LOCUS       DATAVD010000393         5558 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_37611, whole genome shotgun sequence.
ACCESSION   DATAVD010000393 DATAVD010000000
VERSION     DATAVD010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5558
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37611"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1300
                     /locus_tag="VHX39_07270"
     CDS             <1..1300
                     /locus_tag="VHX39_07270"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HEX3990956.1"
                     /translation="HDPLTFLPFAGFLALGFVAQRSTREGSAPHLFVALLVVTVAAFF
                     WLKRYSFLPSATFLPFPYVLIGLSYVFFRVLHLIIDSHQGALENRVGLISYLNYTLNF
                     TSLTSGPIQRYQDYHRMEIERLPLDLVIAGRATERIIVGYFKVAVVSMLLALAQHQAI
                     DDLSIDQTFADRLWSGILIAAIYPVYLYFNFSGYVDVVIGVARFFRIELPENFNRPFS
                     SENFMVFWSRWHITLSNWLKTYVYNPLMMLGMERITAPNLAPYISVVAFFITFFLVGL
                     WHGRTSEFLFFGFLQGGGVAANNLYQVLMRAGMGRAGFRALSANPIYVACSRGLTFTW
                     FAFTLFWFWSDWAQIRGFVAVLGAESLLVWLAIFVAAVLILAAMEAIRTACLRLTWKQ
                     HQIARSRYLRTAWDTALCVVTVALIGLLDSPAPDIVYKTF"
     gene            1679..3265
                     /locus_tag="VHX39_07275"
     CDS             1679..3265
                     /locus_tag="VHX39_07275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990957.1"
                     /translation="MQRRTFLKATAVAPGLIRLASPAIAQPAKGATLRFVPQANLTLL
                     DPVFTTATVTSNHGYYVFDTLYSVGPDGMPHPQMAEGHTIADDKLTWRIRLREGLWFH
                     DGTPVRATDCIASIQRWSARDPFGQALAAAVDKYAAADDRTIVITLRQPFPLLATALG
                     KPDSSVPFIMPERLAATAADKPVTEMVGSGPYRFVTNEYVSGSRVVYERFEKYVSRPE
                     PAVWATGAKVAYFPRIVWNIIPDAATAGAALQNNEVDWWEQPLADLLPQLIADKNIAV
                     QIDQPWGRLSWLITNQLQPPFNDVRIRRAMMMAVRQEDYMRATFGDDQSLWRVCKDVF
                     PFGTPYYSGADGDLMQGDLAAATKMLQQAGYAGQKVVVINPTDFPAIHPLGLVTADTL
                     KKIGMNVELQETDWGTVVQRRASMEPVEKGGWSVFHTFASAAAASTPATHPLINGRGT
                     KGWFGWWNNEAARSLTSQWLAAPDTAGQNDAAKALSHVAMTDVGAIAVGQWYGKTAYR
                     RSITGVLQGVSPYPWNVRTA"
     gene            3398..4957
                     /locus_tag="VHX39_07280"
     CDS             3398..4957
                     /locus_tag="VHX39_07280"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF004816.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX3990958.1"
                     /translation="MGNDPNRRALLKGAGAVAVIAQTATSGAAAEPQPPADLPYRRAT
                     DLVEALANKTVSSRELVDAAIARIEALDGKINAVVVRDFAAARNAAKAADDALAHGER
                     RPLLGLPMTVKEQFNVAGLPTTWGKPAFKDWRPAEDALAVARLKSAGAVILGKTNVPL
                     DLSDWQSYNDIYGTTNNPWDLTRTPGGSSGGSAAALAAGFVSLELGSDIGGSLRAPAH
                     FCGVYGHKPSLDLVPQRGGGPPGTPAIPFRLDLAVAGPMARSATDLSLELGVISGPDE
                     RWDGIGYRLALPPSRHDTLKDFRVLVLDSHPLCPTAGSVTSALNRLAERLGKSGCSVS
                     RTNPLLPDLARTTQVYTELLSAFRGVELSPDDRQRTQTAANALDAGDGSIQAYRLRGL
                     TISHPDWVRTDRVRIGMAQRWQALFREVDVVLCPPMPTPAFPHDHSPGRTRKLDIDGK
                     SVMYGDQYAWISFATLCGLPATAAPIERSDTGLPIGVQIIGGYLEDNTTIGFARLMER
                     EYGGFVAPPSL"
     gene            5032..>5558
                     /locus_tag="VHX39_07285"
     CDS             5032..>5558
                     /locus_tag="VHX39_07285"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3990959.1"
                     /translation="MNDVTAVSQSLAPVARAREIGRFIAEAADQIERDQQIPAPLLTQ
                     IVAARLPRMLLPRSVGGDEIQPWIYLHAIEEISRHDASVGWNLFVANSAALIAPFIPV
                     SAAKAIFDDPRGWIAWGPPNEHTATAVPGGYRISGEWHFASGSRQATWMGAHAHVVEP
                     DGSLRHNRFGRPTTKT"
BASE COUNT         1019 a         1731 c         1701 g         1107 t
ORIGIN      
        1 ccacgatccg ctgacgtttc tgcctttcgc cggcttcctg gcactcggct ttgtggcgca
       61 acgtagtacg cgggaggggt cggcacccca cctgttcgtt gctctgctgg tcgtgacggt
      121 ggcggcgttc ttctggctga aacgttacag ctttttgccg tctgcgacat ttctcccatt
      181 cccttacgtg ttgatcggcc tgtcttatgt gttcttcagg gtattgcacc tgatcatcga
      241 cagccaccag ggcgctttgg aaaaccgcgt cggcctgata tcctacctga actacacact
      301 gaactttacc agcctgacct caggtcctat ccagcggtac caggattatc accgcatgga
      361 gatcgagcgc ctgccactcg acctggtgat cgccgggcga gcgacagagc gcatcattgt
      421 cggctacttc aaggttgcgg tcgtttcgat gttgttggcg ctcgcgcaac accaggcgat
      481 cgatgatctg agcatcgacc agaccttcgc ggaccggttg tggtccggga tactcatcgc
      541 ggcgatctac ccggtgtacc tgtatttcaa cttctccggc tatgtggacg tggtcatcgg
      601 agtggcacgg tttttccgga ttgagttgcc ggagaacttt aatcggccat tctcatcgga
      661 gaatttcatg gtgttctgga gccgctggca cattacacta tcgaactggc tgaaaactta
      721 tgtttataat ccattgatga tgttgggcat ggagcggatc acggcaccca atttggcccc
      781 ttatatctcc gtcgtcgcgt tcttcatcac attctttctg gttggattgt ggcatggccg
      841 aacatcggaa ttcctgttct tcggtttctt gcagggtggc ggggtggccg cgaacaatct
      901 ttatcaggtg ctcatgcggg ccgggatggg gcgcgccggc ttccgtgcgt tgtctgccaa
      961 tccgatttac gttgcgtgct cgcgcggact gacattcacc tggttcgcct tcactttgtt
     1021 ctggttctgg tccgactggg ctcagatccg cggattcgtg gcagtgctcg gggcggagtc
     1081 gctgctggtt tggttggcga ttttcgttgc ggcggtactt atcctggccg ccatggaagc
     1141 cattcgaacc gcgtgcctgc ggctcacatg gaagcagcac cagattgcgc ggtcccgcta
     1201 tctgcgcacg gcatgggata ctgcgctgtg tgtcgtgacc gtggcgttga tcggtctgct
     1261 cgattcacca gcgccggaca tcgtctacaa gacgttttag ggtcgaaaca ggagcgggtc
     1321 gggacgccag tgggccgaat gctagcactg ggttgcttaa ttctccaaca gagacacgcc
     1381 ctttcgccgg tacacaatgc caggtccggc ggatcgagtt gaccgaggtc aacgggcagg
     1441 aaatgccgat aatggtggtc cagctctccc gaagaccagc ctcctacacg actgaacgtc
     1501 cggccgccac gccgtgtcgc tcttgcgcga ggcgcaccgc ccattcaatg taacggtgct
     1561 gccggacggc caaagcccgg tctccggcgg ggctttcgac ccacaaattg gcgcgacggc
     1621 ggcgggaaat cctgccgacg atctgcagcc ttaacaataa gcccacggga gggccgccat
     1681 gcagcgccgc acatttttga aggcaaccgc ggttgcgccc ggactgatac gcctggcctc
     1741 acctgcgatc gcccaacccg cgaaaggtgc gactttacgg ttcgtgcccc aggcgaacct
     1801 gacgctgctc gacccggtgt tcaccacggc aaccgtgacc agcaaccacg gctattacgt
     1861 tttcgacaca ttgtactcgg ttggacccga cggcatgccg catccgcaaa tggccgaggg
     1921 ccacaccatt gcggatgaca aactgacctg gcgcatccgg ctgcgtgaag gcctgtggtt
     1981 tcacgacggt accccggtca gagcaacgga ctgcatcgcc agcatccaac gctggtccgc
     2041 gcgtgacccg ttcggtcagg cgctggccgc tgccgttgac aagtacgcag ccgccgacga
     2101 ccgcacaata gtcatcactt tgcggcaacc ctttcccctg ttggccaccg cactgggcaa
     2161 acccgattcc tcggtgccgt tcattatgcc ggaacggctg gcggcaaccg cagcagacaa
     2221 gccggtgacc gagatggtcg gctccggccc ctatcgtttc gtcaccaacg aatatgtcag
     2281 cggcagccgt gtggtttacg agcgtttcga aaagtacgtc tcgcgtccgg aacctgccgt
     2341 ctgggcgacc ggtgccaagg tggcttactt cccgcgtatc gtctggaaca tcatccccga
     2401 tgccgccacc gccggggccg cgctgcagaa caacgaggtc gactggtggg aacagccatt
     2461 ggcagatttg ttgccgcaac tgatcgccga caaaaacatc gccgtgcaga tcgaccaacc
     2521 ctgggggcgg ctgtcctggc tgatcaccaa ccagctgcaa ccgccgttca acgatgtgcg
     2581 gatccgccgc gcgatgatga tggcggtgcg tcaggaagac tatatgcgcg ccaccttcgg
     2641 cgacgatcaa tcgctgtggc gggtttgcaa ggacgtgttc ccgttcggca caccgtatta
     2701 ctccggcgcc gacggtgacc tgatgcaagg cgacctcgcg gccgcaacga aaatgctgca
     2761 acaggccggt tacgccggcc aaaaggtcgt ggtcatcaac ccaaccgatt tcccggcgat
     2821 ccatcctctg ggcctggtga ctgccgatac gctgaaaaaa atcggcatga acgtggagct
     2881 acaggaaacc gactggggca ccgtcgtgca gcgccgagcc agcatggagc ccgtcgaaaa
     2941 gggcggttgg agcgtgttcc acaccttcgc ctctgcagca gccgccagca cgcccgcaac
     3001 gcatccattg atcaacggac gtggcaccaa gggatggttc gggtggtgga acaatgaagc
     3061 ggcgcgctcg ctgacgtcac agtggctggc tgctccggac accgccggtc agaacgacgc
     3121 ggcgaaggct ttgtcgcatg tggcgatgac cgacgtgggt gcgattgcgg ttgggcaatg
     3181 gtacggcaag accgcatacc gccggagtat tactggcgtg ctgcagggcg tctcgccgta
     3241 cccgtggaac gtgcggacgg cgtaacaccg cttggtgtgt cgcaatctcc accagcagac
     3301 tgttcaaccc aggcgacagt aatggcgctt gacgtcgctt gacaaaagtc tggcggtccg
     3361 gtgctaatat ggtaccgcgt agtaccgcga ggtgtcaatg ggaaacgatc caaaccgccg
     3421 tgcgttattg aagggagccg gtgccgtggc cgttatagcc cagaccgcaa cctcgggtgc
     3481 tgcggcagag ccacaaccgc ccgccgacct gccgtatcgc cgtgccaccg acctggtcga
     3541 ggcgctcgcc aacaagaccg tctcgtcgcg tgaactcgtc gatgccgcga tcgcccggat
     3601 tgaagcgttg gacggcaaaa tcaacgctgt cgtggtgcgc gatttcgctg ccgcccgcaa
     3661 cgctgcgaaa gccgccgacg acgctctggc ccacggcgag cgccgcccgc ttctgggctt
     3721 gccgatgacc gttaaggagc agttcaacgt cgccggcctg cccaccacct ggggcaagcc
     3781 ggcgttcaag gactggcggc cggccgagga cgctctggcg gtggctcgat tgaagtccgc
     3841 aggcgccgtc atcctcggca agaccaacgt cccgctcgat ttgtccgact ggcagagcta
     3901 caacgacatt tacggaacca ccaacaatcc ctgggacctc acgcgcacgc caggcggatc
     3961 gtcgggtggc tcggcggcgg cactggcggc cgggttcgtt tcgctcgagc ttggctcgga
     4021 catcggcggt tcgttacggg cgccggcaca tttttgcggc gtttacgggc ataaaccaag
     4081 cctcgatctg gtgccgcagc gcggcggcgg cccacctgga acgccggcga tcccgttccg
     4141 tctcgatctc gccgtcgccg gtccgatggc ccgaagtgcc accgatcttt cactcgaact
     4201 gggcgtcatc tctgggccgg acgaacgatg ggacgggatc ggctaccggc tcgctctgcc
     4261 gccgtcgcgc cacgatacgc tcaaggactt tcgcgtgctg gtgctcgaca gccacccgct
     4321 ttgtcccact gccggcagtg taacgagtgc gttgaaccgg ctggccgagc gcctcggtaa
     4381 gtccggctgc tcggtttcgc ggacgaaccc attgctgcct gatcttgcgc gtacaaccca
     4441 ggtgtacacg gaactcttgt cggccttccg aggcgtagaa ctgtcccccg acgatcgcca
     4501 acgtacccag actgcggcca atgcactgga tgcgggcgac gggagcatcc aggcgtatcg
     4561 attgcgaggc ctgacgatca gccaccccga ttgggtgcgg acagaccgcg tccgtatcgg
     4621 gatggcgcaa cgctggcagg cgctgttccg cgaggtcgat gtcgtgctgt gcccgccgat
     4681 gccgaccccg gcgtttccgc atgaccattc tccaggccgg acacggaagc tcgatatcga
     4741 tggcaaatcc gtcatgtacg gcgatcaata cgcatggatc agtttcgcaa cgttatgcgg
     4801 cttgccggcg acggcggcgc cgatcgaacg ctcggacacg ggattaccga tcggcgtgca
     4861 aatcattggc ggctatctcg aggacaacac aacgattggg ttcgcccggt tgatggagcg
     4921 ggaatatggg gggtttgtcg cgccgccgtc attgtagtgc ggatgcagtt tgacaaacgc
     4981 cccgtcgcga ggcgctaatc gctgcggcca acgttgtacg gactgcttac gatgaatgat
     5041 gtcaccgccg tgtcccaaag cctcgccccc gtcgcaaggg ccagggaaat cgggcggttt
     5101 atcgccgaag ccgccgacca gatcgaacgg gatcagcaga ttcctgcgcc gttgctgacg
     5161 caaatcgtcg ccgcccgcct gccgagaatg ctgctgccgc gctcggttgg tggcgacgaa
     5221 atccagccgt ggatttatct gcacgcaatc gaggagatca gccggcacga cgcctcagtc
     5281 ggctggaacc tgtttgttgc caacagcgcg gcactgattg cacccttcat tcctgtcagc
     5341 gcggcaaaag cgatcttcga cgatccgcgc ggctggattg cctggggacc gccgaacgaa
     5401 cacacggcta cggcggttcc gggtggttat cggatcagcg gcgaatggca tttcgccagc
     5461 ggttcgcgcc aggccacctg gatgggcgcg cacgcccatg ttgtcgaacc ggacggctcg
     5521 ctacggcaca atcggttcgg ccgcccaacg acaaaaac
//
LOCUS       DATAVD010000394         9861 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2828659, whole genome shotgun sequence.
ACCESSION   DATAVD010000394 DATAVD010000000
VERSION     DATAVD010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9861
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2828659"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..617)
                     /locus_tag="VHX39_07290"
     CDS             complement(<1..617)
                     /locus_tag="VHX39_07290"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3990960.1"
                     /translation="MSESVAHFYDHYGWVKQGAGESGEDQLHRSFPPHYAEYNARSEK
                     RTLAVLTKNSGSLLIAGCGDLPESHVRIAASFGQVTCMDFSATALSIAQHKLGTLASY
                     RHESILNSTLPDGVFDTTFCAHVIFHIDKDQQETAVRELVRVTKPGGRVVILYANPHS
                     PFYIPGAVMRGVKRRIGRRHTGNVGRPPPLYYHAHTLGWWNRFTT"
     gene            complement(762..1679)
                     /locus_tag="VHX39_07295"
     CDS             complement(762..1679)
                     /locus_tag="VHX39_07295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990961.1"
                     /translation="MQAALSHPGTPRWLVPVLLGIVVPLLLAALPGESWQIVARDADL
                     VKHVRAEVALLHEVQTRFAQAEQDGVSGRSPQARQHAISDVQRAIAMIANENPAIANV
                     EALRDAIATYAQAITQDLTVEGYVDPETQARLVSAQAHAVGSILGQLQSGDEARLREP
                     LQAMRVAETTELYDRDPHAADQFSRLAGIFTARVDGMAIPQGTRASLTARLVAYEHAV
                     LSLPNALARQHVEAAAASARAVEAALDNVDRALTAEQRRLNRTFEAACKGFVWSIIAA
                     LGASLLIVGTGVFGRAAFDHGLVRIRHAR"
     gene            1880..2638
                     /locus_tag="VHX39_07300"
     CDS             1880..2638
                     /locus_tag="VHX39_07300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3990962.1"
                     /translation="MRQTEARIMTQNIYDNPEFFAGYSQLGRSVDGLDGAAEWPALRA
                     MLPAMEGINVVDLGCGFGWFCRWARRHGAAHVRGLDVSEKMLERARSETPDPAIAYAI
                     ADLEQFDLPAASFSLAYSSLALHYVEALDRLLDTVHRALVSRGHLVFSVEHPIYTAPS
                     NPGWVTDAAGGKRWPVDGYLLEGPRSTDWLTKGVIKQHRTIAHYLNTLLRHGFRILQV
                     EEWGPTDAQIAARPLLADERQRPPFLLVSAQRTN"
     gene            complement(2897..3298)
                     /locus_tag="VHX39_07305"
     CDS             complement(2897..3298)
                     /locus_tag="VHX39_07305"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX3990963.1"
                     /translation="MSTIEHPRPEGLLHNAGFSQVVVASGTRSIHTAGQVSIDEHGTL
                     VGGDDLAAQTAQAMRNVGLALAAAGASFSDIVKLTTYVVNYKPEHRSVIGQARAPFFA
                     GSPPPASTLVGVTALALPEWLVEVEAIAVVD"
     gene            complement(3295..3678)
                     /locus_tag="VHX39_07310"
     CDS             complement(3295..3678)
                     /locus_tag="VHX39_07310"
                     /inference="COORDINATES: protein motif:HMM:NF016854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HEX3990964.1"
                     /translation="MVASAGFAEFLREQLAPLGHVTMRRMFGKSGVFCNGLMFGMVTD
                     DTLYVRVDELNKAVFKEAGSAPPLNYEKQGRSIDLAFWRVPERLLDEPEELVSWARAA
                     LAAARRVAAQRGRTVSKSKAKEPEI"
     gene            3825..4628
                     /locus_tag="VHX39_07315"
     CDS             3825..4628
                     /locus_tag="VHX39_07315"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX3990965.1"
                     /translation="MPVVETERHGQILVIRMNRPERLNALSHEMRTLLAEAWTGFRHD
                     DKLEVAIFTGTGRGFCAGEDMQESLKNGAPGGRRPDVEDPFMSGALEKPVIAAVNGFA
                     MGGGFMLVERTDLRLAVRGAIFEVSEAKRWLLGGYNHGHIANVPYPIAMEMALGFRFT
                     AERFYDIGFLNRITEPDDLMPEALKMAEHLLTLPPASRVNTVHMMRQMRPSPGPDMQR
                     LAAALHEHGAKSDLMESRAAFAEKRKPQFKGWNDPQDRYRTPTLDTLKD"
     gene            complement(4638..4919)
                     /locus_tag="VHX39_07320"
     CDS             complement(4638..4919)
                     /locus_tag="VHX39_07320"
                     /inference="COORDINATES: protein motif:HMM:NF016162.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF427 domain-containing protein"
                     /protein_id="HEX3990966.1"
                     /translation="MQAILKDHEIAASDDVVSVGGYEYFPPSAVRREWLEKSPKTPHD
                     LECPHGVQFYDVVINGERHARNAWSYESPQPKMEPVRDRFGFWEDVVIR"
     gene            complement(5386..6057)
                     /locus_tag="VHX39_07325"
     CDS             complement(5386..6057)
                     /locus_tag="VHX39_07325"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HEX3990967.1"
                     /translation="MKICVVTPYFQESLEWVVHAHASVKSQTIEARHVLVCDGTTPAQ
                     IPDFQGTQIVLQRNYRDYGNTPRLIGCFHAITALEADAIAFLDADNWYYPDHLRMLSG
                     IAANTQLEAVASARMLHRLDGTPMMKCPTVDGANYIDTSCLMVFRPAFRHLIAWVLQS
                     QNMAAETDQFLWRLLREAGVPMAFVDRPTVAYRTRHQVHYEQAREPVPPGAVMRSDLH
                     GERYQ"
     gene            6145..6654
                     /gene="ruvC"
                     /locus_tag="VHX39_07330"
     CDS             6145..6654
                     /gene="ruvC"
                     /locus_tag="VHX39_07330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010515151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEX3990968.1"
                     /translation="MVRLLGLDPGLRFTGWGVIDVDGNRLRHVGDGVIATDSTSPVPE
                     RLKILHDALLALLERLRPDEAAVEETYVNRNGAATLKLGYARGVALLAPALAGVTVTE
                     YGAKSVKKAVVGTGGADKDQVEMMVRRLLPGALIRRADAADALAVAICHAHHRASKLA
                     WAERVAVAP"
     gene            6753..6941
                     /locus_tag="VHX39_07335"
     CDS             6753..6941
                     /locus_tag="VHX39_07335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001088011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HEX3990969.1"
                     /translation="MADTEIRSIFDIEPDEAAEAEADAAADAEIDAGRFVPHDKVVEW
                     LKSWGTPNESPCPEPEPR"
     gene            6938..7087
                     /locus_tag="VHX39_07340"
     CDS             6938..7087
                     /locus_tag="VHX39_07340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEX3990970.1"
                     /translation="MSKVVWSTMALGHLRFIRAYLEQFNPRAAQDLAEGLMAAGDSLA
                     TFPRR"
     gene            7094..7219
                     /locus_tag="VHX39_07345"
     CDS             7094..7219
                     /locus_tag="VHX39_07345"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEX3990971.1"
                     /translation="MPGTDTRELVTAYPYIIRYRIVGDQVRILRVRHTSRRPTAR"
     gene            complement(7277..8299)
                     /locus_tag="VHX39_07350"
     CDS             complement(7277..8299)
                     /locus_tag="VHX39_07350"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3990972.1"
                     /translation="MPKPLRLGAVYDFRNPPESGMATPDFYAAIMEQVTWLDGLGLDL
                     VWFTEHHFVADGYLPSWIPVASAMAARTKHARFSCDVCLLPFNHPIRLAEDLAVLDNL
                     SNGRVEIGVGMGYAPHEFRGFGLPVSRRLSLTDEGLAVLRHAFTGETFSFHGKRYDFT
                     DVKITPGYVQPGGPPLWVAALAEPGALRAARFDTNLLPQGPRVRALDPWRDALSASGR
                     NPENYRIGIIRPCLVTDDPERDWPIVRAGERRRMEVYSRFREEAGGHGGVAGITEETR
                     IPQTWIVGNVDHCVNELSSFIREYSLTDIVTWAVPPGMRPEQMNHSLERFARDVAPRL
                     RAMFPG"
     gene            complement(8362..8661)
                     /locus_tag="VHX39_07355"
     CDS             complement(8362..8661)
                     /locus_tag="VHX39_07355"
                     /inference="COORDINATES: protein motif:HMM:NF018717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEX3990973.1"
                     /translation="MPKGFLYAEFEVLDAAEFEKYREKVGAVSASFGGRYVVRRAEPV
                     VLDGEWSPKRLVIIEFDSPEQVRAFYDSPDYQAILPFRLRSTKGHVLLLTGANIG"
     gene            8694..9590
                     /locus_tag="VHX39_07360"
     CDS             8694..9590
                     /locus_tag="VHX39_07360"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEX3990974.1"
                     /translation="MVRPERNHPHQPRGGRRLTKPRPRWRSIALRTINASTSDHMSLA
                     AAGCAFYATLSLFPAISMLISVYGLVFDLNSVLPQLEVLRHLLPSPAFALIEDRVTQL
                     VAQPRGHLTIGLGIAFLVSFWSSASASKAVLSAMNVAYDTTERRSFLRFQLIGLAMTL
                     TAVIGVVLAIAVLLVMPRLIQFSGLSAFGAALIQITSFLLVIGFFGVGLAVLYARGPS
                     RTPPPGARVVPGAALATLLWLVSSYVLSLYVAKLANFDATYGSIGAVVGIMLWFYVSA
                     YASLLGAELNAQLELAGRAEQE"
     gene            9597..>9861
                     /locus_tag="VHX39_07365"
     CDS             9597..>9861
                     /locus_tag="VHX39_07365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990975.1"
                     /translation="MIRWFAAALFAIADLTADANAQAPDTVFDGTARTGTDTRAVRFR
                     FFCSSNNGPNITGVLGVELEVPQYEQLRPVFDFDPFEGPDAHAG"
BASE COUNT         1822 a         3082 c         3079 g         1878 t
ORIGIN      
        1 tcagtcgtaa aacgattcca ccagccgaga gtgtgtgcgt gatagtacag agggggtggc
       61 cggccgacat ttccggtgtg ccgcctgcca atccttcgct ttaccccccg catgacagcc
      121 ccagggatat agaagggcga atgagggttg gcgtatagga tgacaacgcg cccgccaggt
      181 tttgtaaccc gcaccagttc acggacggca gtctcctgct ggtccttatc aatatgaaag
      241 ataacgtggg cgcagaaggt cgtgtcgaaa acaccatctg gcagtgtgga atttaagatt
      301 gattcatgcc gatacgaagc caaggtcccg agcttgtgct gtgcgatact tagcgcggtg
      361 gccgagaagt ccatgcaagt gacctgacca aagctggcgg caattcggac atgactttcg
      421 ggcaagtcgc cgcagccggc aatcagcagc gagccactgt tcttggtcag gactgcaaga
      481 gtccgcttct cactccgtgc gttgtattcc gcgtagtgcg gcgggaagga gcggtgaagc
      541 tgatcttcgc ccgactctcc ggcaccttgt ttcacccagc cgtaatggtc gtagaagtga
      601 gcgacacttt ccgacacgga ttgctttacg tcggtcttcc catgttccac aatttacccc
      661 cctgctaaaa tgggtttggg cacaacgatg caaccgcgcc tgaggggtgt caaggcggag
      721 tccagtcaga cagtcgcggc tggttgggcg agtggcctta gtcacctcgc atggcggatg
      781 cgcaccagcc catgatcgaa cgccgcgcgt ccgaacacgc ccgtaccaac gatcaacagc
      841 gaggcgccca gagcggcgat aatcgaccag acaaatcctt tgcatgcggc ctcgaacgtt
      901 cggttcagac gccgctgttc ggcggtcagg gcgcggtcga cattgtccag tgcggcctcg
      961 accgcgcgag ccgacgccgc ggctgcttcc acgtgttgtc gggccaacgc attgggcaga
     1021 ctcagtacgg catgttcgta agccaccaac cttgccgtga gactggcccg cgtcccttgt
     1081 ggtatcgcca tcccgtccac tcgcgcagtg aaaatcccgg ccaaacgaga gaattggtcc
     1141 gccgcgtgcg ggtcccgatc gtacaattcg gttgtctcgg cgacgcgcat ggcctgcaac
     1201 ggctcccgca agcgggcttc gtcgcctgat tgcaattgtc caagtatcga cccgaccgcg
     1261 tgagcctgtg cgctgaccaa ccgtgcttgt gtttccgggt cgacgtaacc ctcaactgtg
     1321 aggtcctggg tgatagcctg agcgtaggtc gcgatcgcgt cccgcaaggc ctcgacgttc
     1381 gcaatggccg ggttctcgtt ggcgatcatc gcaattgccc gttggacatc ggaaatcgcg
     1441 tgttgccgag cctgggggga tcggccggaa acaccatcct gctcagcctg cgcaaacctg
     1501 gtttgaacct cgtgcaacaa ggcaacttcg gcccgaacgt gctttaccag gtcagcgtcc
     1561 ctggcgacga tttgccacga ttcgccgggc agagccgcca acagcaacgg cacaacgatg
     1621 ccgagcagga caggcaccag ccaacgcgga gtaccaggat gtgacaatgc cgcttgcact
     1681 tgaatctcca accgccagac ttcgaacctc gtgcgcggca gcatggtgga taacgatgaa
     1741 tgaactgtta acggcgccgc tgtcgatgca tccaccgcac gaattccggc gttatcacaa
     1801 tggcatgtgg caaagccggg tcccgcggcg gccttgactg atccggcgcc tcgggtcacc
     1861 ccacccgcgg cacctgccca tgcggcaaac cgaggcccgg atcatgaccc agaacatcta
     1921 cgacaacccc gaattcttcg ccggctacag tcaactcggc cgctcggtcg acgggctgga
     1981 tggtgcggcg gagtggcccg ctctacgcgc catgctgccg gcgatggagg gcatcaacgt
     2041 tgtcgatctc ggctgcgggt tcggctggtt ctgccggtgg gcacgccggc atggggcggc
     2101 ccatgtgcgc ggcctcgatg tatcggaaaa gatgctcgag cgggcgcgat cggagacgcc
     2161 ggatccggcg atcgcatacg ccattgcgga cctggaacag ttcgacctgc cggccgcatc
     2221 gttcagcctc gcctatagct cgttggcgtt gcattacgtc gaggctctgg accggttgct
     2281 cgacactgtg caccgcgcgc tggtcagccg cggccacctg gtattttcgg tcgagcatcc
     2341 gatttacacc gcgccgtcaa accccggttg ggtgaccgac gcggccggcg gcaaacgatg
     2401 gccggtcgat ggctatttgc ttgagggccc acgcagcacg gactggctga ccaaaggcgt
     2461 gatcaagcag caccgcacca tcgcgcatta tctgaatact ctgctgcgcc acgggttcag
     2521 gattttgcag gtcgaagaat ggggcccgac cgatgcgcaa atcgccgccc gcccactcct
     2581 ggcagacgag cgccaacgcc cgccattcct tctggtcagt gcgcaacgga cgaactgagc
     2641 gtccacgaca aaagtcacga cttctggttg ccggcattct gctggtttcc acagtcagta
     2701 gaccgtgagc cacgcccccc tttcgccacc ctcgtgcttg tcacgaggat catcatcagc
     2761 acctcgccgg gattgtcccc ggaacaagtc cggggatgac gattgagtgt gtcacggttc
     2821 aacgattgag tgtgtcacga tcagcgattc tgggcaccag gcacgaaccg atcgccggag
     2881 atcagtgttg ggtcgctcaa tcgacaacag cgatcgcctc aacctcgaca agccactccg
     2941 gcagcgcgag tgcggtcacg ccgacgaggg tgctcgccgg cggtgggctt cccgcaaaga
     3001 atggagcgcg cgcctggcca atgacacttc ggtgttccgg cttgtagttc acgacatatg
     3061 tcgtgagttt cacaatgtcg gaaaagctcg caccggcggc agcgagcgcc agaccgacat
     3121 tgcgcatggc ctgagccgtc tgtgcggcaa gatcgtcacc accgaccaat gtgccgtgct
     3181 cgtcgataga aacctgtccg gcggtgtgga tcgagcgggt gcccgaggca acaaccacct
     3241 gtgaaaatcc tgcgttgtgc agcagtccct ccgggcgggg atgttcgatc gtgctcatat
     3301 ctcaggttcc tttgctttcg actttgaaac tgtccgtcct cgctgtgccg ccacccgtcg
     3361 tgccgctgcc agcgcggccc gagcccacga gaccagctct tcaggttcgt cgagcagccg
     3421 ttccgggaca cgccaaaatg cgagatctat gctgcggcct tgtttctcgt aattgagtgg
     3481 cggcgcggac ccggcctcct tgaagactgc cttgttgagc tcgtcaaccc ggacatagag
     3541 cgtatcgtcc gtcaccatcc cgaacatcag cccgttgcag aatacacccg atttgccgaa
     3601 catacgccgc atcgtaacgt gtcccaacgg cgcaagttgt tcacgcagga actccgcaaa
     3661 accagcgctg gcgaccattc gtttggcttt cccggatcag gcgaaatggc gcaggatatc
     3721 tgcatcgcat cgatcgaacg ggtggtccgt tgcgcaccgg ctgctggata tcgcttcccc
     3781 caatccacct gctaccctca ggaacccaat cacggagccc tcccatgcct gtcgtcgaaa
     3841 ccgaacgcca cggccagatc ctcgtcatcc ggatgaaccg gcccgagcgc ctgaacgccc
     3901 tcagccacga aatgcggact ttgctggcgg aagcctggac cggattccgc cacgacgaca
     3961 agctggaggt cgccatcttc accggcaccg gccgcggctt ctgcgccggg gaagacatgc
     4021 aggagtcgct caaaaacggt gccccgggcg gtcgccggcc cgacgtcgag gacccgttca
     4081 tgtccggcgc gctggaaaag cctgtcatcg ccgcggtcaa cggctttgcc atgggcggcg
     4141 gcttcatgct ggtcgagcgt accgacctcc gcctcgccgt ccgcggcgcc atcttcgagg
     4201 tctccgaagc caagcgctgg cttctgggcg gctacaacca tggccacatc gccaatgtgc
     4261 cgtacccgat cgcgatggag atggccctcg gcttccgctt caccgccgag cggttttacg
     4321 acatcggctt tctcaaccgc atcaccgagc ctgacgacct gatgcccgag gcgttgaaaa
     4381 tggccgagca tctgctgacc ttgccgccgg cctcccgggt caacacggtc cacatgatgc
     4441 gtcagatgcg gccgtctcca ggcccggaca tgcagcgcct ggccgccgcg ttgcacgagc
     4501 acggggcaaa gagcgatctg atggaatccc gcgccgcttt tgccgagaag cgcaagccgc
     4561 agttcaaagg ctggaacgat ccgcaggacc gttaccggac gccgacgctt gatacgctga
     4621 aggactgaac ggcgcggtca gcggatgacc acgtcctccc agaagccgaa ccggtcgcgc
     4681 acgggctcca ttttcggctg tggcgattca taggaccacg cgttgcgtgc atggcgctcg
     4741 ccgttgatca cgacgtcgta gaactgcacg ccgtgcgggc attccagatc gtgcggggtt
     4801 ttcggcgact tttccagcca ctcccgccgg acggcggatg gtggaaaata ttcgtagcca
     4861 ccgacggata cgacgtcgtc gctggcggct atttcgtggt ctttcaggat ggcctgcatg
     4921 gttggctcct ttgcaaattc gatgcgggtg cctggcacct cgccccggca cctcggatcg
     4981 acccgaaatt ggtaccgccc tcggaccatg gcggcaagac cccggcggtt cgccgccagg
     5041 tcaccaatca accggtgcgt gagcaaactt attcccgaat cggttgcagt tcgtgcaaag
     5101 agccgggcag gaccacaaaa gcccaggatc ataaaggtcc aggatcataa aggtccagga
     5161 tcataaaggt agtgtcatgc acatcgccag cggactgact ttcgtcagac gcaacccggc
     5221 tcaatcggac gatgctacca ggggttcggc ccggctggcg tggaggtgga cgccggaacg
     5281 gagcagtaca atccgcaacc ggttgcggaa gatgcttccc ggcgtgatcc tgctgagcgt
     5341 gcttgtggcc cttggggcgc tgttcccgat cctgttctga ccgggctact ggtaccgctc
     5401 cccatgcaaa tccgagcgca tgaccgcccc gggggggacc ggttcacgcg cctgctcgta
     5461 atgcacctgg tggcgggtcc ggtaggcgac cgtcggccgg tcgacgaagg ccatcggcac
     5521 gccggcctcg cgcagcagcc gccagaggaa ctggtcggtc tccgccgcca tgttctggct
     5581 ctgcaaaacc caggcgatca ggtgccggaa cgccggccgg aacaccatca ggcaactggt
     5641 gtcgatgtaa ttggcgccat ccaccgtcgg gcatttcatc atgggcgtgc catccagccg
     5701 gtgcagcatc cgcgccgagg ccaccgcctc caattgagtg ttcgccgcaa ttccggacag
     5761 catccgcaga tggtccggat aataccagtt gtccgcgtcg aggaaggcga tcgcatcagc
     5821 ctccaacgcg gtaatcgcat gaaagcaccc gatcagccgc ggcgtgttgc cgtagtcgcg
     5881 gtagttccgc tgcaacacga tctgggtgcc ctgaaaatcc gggatctgcg ccggtgtcgt
     5941 gccatcgcaa accagcacat ggcgagcctc gatcgtctgc gacttcacgc tggcgtgagc
     6001 gtgcaccacc cattcgaggc tttcctgaaa gtacggcgtt accacgcaga tcttcattga
     6061 gccattcgct ttcccgctat gcgacaaaca ctgtgccagg ggtttatatc agcctggttg
     6121 ccgtaacgga gactggattc gcacatggtg aggcttctcg gcctcgatcc cgggttgagg
     6181 ttcaccgggt ggggggtgat cgacgtcgac ggcaaccggc tgcgccatgt cggcgacggc
     6241 gtgattgcca ccgacagcac gagcccggtg ccggagcggc tgaaaatcct gcacgacgcg
     6301 ttgctggcgc tgctggaacg gctgcgcccg gatgaggcgg cggtcgagga aacctatgtc
     6361 aaccgcaacg gcgcggcgac cctgaaactg ggctatgcgc gcggtgtggc gctgctggcg
     6421 ccggctctgg caggtgtgac ggtaacggaa tacggcgcca agtcggtgaa gaaggcggtg
     6481 gtcgggacgg gaggcgcgga caaggatcag gtcgagatga tggtgcggcg gctgttgcct
     6541 ggcgcgttga tccggcgggc cgatgccgca gacgctttgg ccgtggcgat ctgtcatgcc
     6601 caccaccggg cctccaaatt ggcctgggct gagagggtgg cggtggcgcc ctgaggggaa
     6661 attccccttg tcggtggtca taccgactgg ctacatatca tgccgcgcct ggcactgacc
     6721 tgtgctactg gtcaagcggc gggatggtga ccatggctga cactgaaatc agatctatct
     6781 tcgacatcga gccggatgaa gccgctgagg ctgaagctga cgcagcggcc gatgctgaaa
     6841 tcgatgcagg gcgattcgtg cctcacgaca aagtcgttga atggctgaaa tcctggggca
     6901 ccccgaacga gtcgccctgt ccagagccgg agcctcgttg agtaaagtcg tttggtcgac
     6961 catggctctg ggtcacctgc ggttcatccg tgcctatctc gagcaattta atccgagagc
     7021 ggcgcaggac ctggcggagg gattaatggc ggcgggcgac agcctcgcaa ccttcccacg
     7081 tcgttgacgt ccggtgccgg gtaccgacac gcgagaactg gttaccgcgt atccctatat
     7141 cattcgttat cgcatcgtcg gagaccaggt tcgcatattg cgagtccgcc acacttcgcg
     7201 caggccaacg gcccgctgaa gattccgtcc cgccaggggc caatgatgat ccaggagacc
     7261 ttcagttacc ggctcatcac cccggaaaca ttgcccgcag ccgtggtgcc acatcgcggg
     7321 cgaaacgttc caggctgtgg ttcatttgct ccggccgcat gccgggtggg accgcccagg
     7381 taacgatgtc ggtgagagag tattcgcgga taaaggagga aagttcgttg acgcaatgat
     7441 cgacattgcc aacgatccag gtctgcggaa tgcgggtttc ctcggtgatg ccggcgacgc
     7501 cgccatggcc gccggcttcc tcgcggaacc gactgtagac ttccatccgg cggcgctcgc
     7561 cggctcggac gatgggccag tcgcgctcgg ggtcgtcggt gaccagacaa gggcggatga
     7621 tgccgatccg atagttttcc gggttgcggc cggatgccga cagcgcatcc cgccacggat
     7681 cgagcgcgcg gacgcgcggt ccttgcggca acagattggt gtcgaagcga gcggcgcgca
     7741 gtgcgcccgg ctcggcaagg gccgcgaccc ataacggcgg gccgcccggt tgcacataac
     7801 cgggagtgat cttcacgtcg gtgaagtcgt agcgcttgcc gtggaagctg aacgtctcgc
     7861 cggtgaaggc gtggcgcagc accgcgaggc cttcgtcggt cagggacagc cggcgtgata
     7921 ccggcagccc aaatccacgg aactcgtgcg gggcgtaacc catgccgacc ccgatctcga
     7981 cgcgtccgtt gctgagattg tcgagcacgg cgagatcctc ggccagccgg atcggatggt
     8041 tgaatggcag caggcacacg tcgcaggaaa atcgtgcgtg cttcgtgcgg gcggccattg
     8101 cggaggcgac cgggatccag gacggcagat atccgtcagc cacaaaatga tgttcggtga
     8161 accacacgag atcgaggccg agcccgtcga gccacgtcac ctgctccatg atcgcggcgt
     8221 agaagtcggg ggttgccatc ccggactcgg gcggattgcg gaagtcgtaa acggcgccga
     8281 ggcgtagtgg ttttggcatg gtttcctccg atccggagca ttcgtgtccg gaatgagttg
     8341 ctccggctgt tggatcatag gttacccgat attcgccccg gtcagcagca acacatgccc
     8401 cttcgtggaa cgcaaccgaa acggcaggat cgcctggtag tcgggcgaat cgtagaacgc
     8461 ccggacctgt tccggactgt cgaactcgat gatcaccagc cgtttcggcg accattcccc
     8521 atccagcacc accggctcgg cccgccgcac gacgtaacgg ccaccgaacg aggccgacac
     8581 ggcgccgacc ttctcgcggt atttctcgaa ctccgcggcg tccagcacct cgaattcggc
     8641 gtagaggaaa cctttgggca tggtcgatcc tttcgtatcc tgccagggtc gcaatggtgc
     8701 ggcccgagcg caaccatccg caccagccga ggggaggacg tcgcctgacc aaaccacgcc
     8761 cgcgctggcg cagcatcgcc ctgcgcacaa tcaatgcgag caccagcgac cacatgtccc
     8821 tggccgccgc cggctgcgcg ttttacgcca cgttgtcgct gtttccggcg atctcgatgc
     8881 tgatctcggt ctacggtctg gtgttcgacc tcaacagcgt cctgccgcag cttgaggtgc
     8941 tgcgccatct gctgccgtcg cccgccttcg cactgatcga ggaccgggtg acccagcttg
     9001 tcgcccaacc gcgcgggcat ctgacgatcg ggctgggcat tgcatttctg gtgtcgttct
     9061 ggagtagtgc gtccgcctcg aaagcggtgc tgtcggcgat gaatgtcgct tatgacacga
     9121 ccgaacggcg ctcgttcctg cggtttcagt tgatcggcct cgccatgacg ctgacggcgg
     9181 tgatcggcgt ggtgctggcg attgccgtgt tgctggtgat gcctcggctg atccaattct
     9241 ctggactatc ggcgttcggc gcggcgctga tccagatcac gagcttcctt ctggtgattg
     9301 gatttttcgg cgtgggactg gcggtgcttt acgcgcgggg cccctcacgt acgccgccgc
     9361 ccggggcacg ggtagtgccg ggcgcggcac tggcgacatt gctgtggttg gtcagttcct
     9421 atgtgttgtc gctttatgtg gcgaaactgg cgaatttcga cgcgacctac ggctcgatcg
     9481 gcgcggtggt cggcatcatg ctttggttct acgtttccgc ctatgcgtcg ctgttagggg
     9541 cggaactgaa cgcgcaactg gaactggccg gacgtgctga acaggaatga tggcggatga
     9601 tccgatggtt tgccgcggcg ctgtttgcaa ttgccgacct gacggctgac gcgaacgcac
     9661 aggcgccgga caccgtgttt gacggtacgg cacggaccgg caccgatacg cgggcggtgc
     9721 ggttccgttt cttctgctca tcgaacaacg gccccaatat caccggcgtt ctcggggtgg
     9781 aactggaggt cccgcagtac gaacagttgc gtccggtctt cgatttcgac ccgttcgagg
     9841 gccccgatgc ccatgccgga c
//
LOCUS       DATAVD010000395         1683 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_223766, whole genome shotgun sequence.
ACCESSION   DATAVD010000395 DATAVD010000000
VERSION     DATAVD010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1683
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223766"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..892
                     /locus_tag="VHX39_07370"
     CDS             <1..892
                     /locus_tag="VHX39_07370"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3990976.1"
                     /translation="FSVILLPRIASATCAPVAGAEPRVWHAAAEDSTVRIRFLGHASF
                     LIETPNNVRAITDYSGVYTTDPAPDIVTMNHAHPSHYTLQPDPRIGIVLHGWQEGPKP
                     PSYDIVLRDLRVTNLATNIRDWGGGTERNGNSIFVFETVGLCIAHLGHLQHLLEPADL
                     DALGHIDIVMIAVDGGYTIGQADVRTVVEQLHPRIVLPMHYFTADNLARFLDMMRDLY
                     AIDVRHEPRIRYRERPCPTAPRSSRCLADFDWQHPGDVLAGRRRICDQKPAGQSPHQN
                     DHGSCGPARNALTTKEGTRS"
     gene            889..>1683
                     /locus_tag="VHX39_07375"
     CDS             889..>1683
                     /locus_tag="VHX39_07375"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEX3990977.1"
                     /translation="MTARTAPPFRADHVGSLLRPKELQSARAAWKGGNLTHDALREVE
                     DRCIVAAIAKQEAIGLRAATDGEYRRAYWHYDFVAGLDGVEIYEPEQKIQFKGGVPLT
                     HMLRVNGRIGFSKPIMLDDYKYVASHVHAAMPKQTIPSPSVVHFRGGRNAIDQTSYPG
                     LDSFFADLGEAYNQAVASFGAAGCKYLQIDEVNIAYLCDPEQIAALKARGEHVDNLLH
                     IYGAMLNRAIEARPPGMTISMHLCRGNFRSTFVATGGYEPVAEVLFN"
BASE COUNT          327 a          538 c          487 g          331 t
ORIGIN      
        1 gttttcggtt atattgttgc cacgaattgc atcggcgacc tgcgcgccgg ttgccggtgc
       61 cgaaccacgc gtgtggcacg cagccgccga ggattcgacc gttcgtatca ggttcctcgg
      121 ccatgccagt tttttgatcg aaacgccgaa caacgtgcgt gccatcacgg actacagcgg
      181 cgtctacacc accgatccgg cacccgacat cgtaacgatg aaccacgcgc atccgtcgca
      241 ctacacgctg caaccggatc cgcgcatcgg catcgtgctg catggatggc aggaggggcc
      301 aaaaccgcct tcctacgaca tcgtgctgcg cgacctccgc gtcaccaatc tggcaacgaa
      361 tattcgtgac tggggcggcg ggacggagcg caacggcaac tcgatcttcg tcttcgagac
      421 cgtcggcctg tgcatcgccc atctcggtca tttgcagcat ttgctggaac cggccgacct
      481 cgacgcgctt ggccatatcg atattgtgat gattgcggtt gatggtggtt acaccatcgg
      541 tcaggcggac gttcgtaccg tcgttgagca actccacccg cgcatcgtgc tgccgatgca
      601 ttatttcacg gcggacaatc ttgcgcggtt tctggacatg atgcgcgacc tctatgccat
      661 cgatgtccgg catgagccga ggatcaggta tcgcgagcga ccctgcccga ccgcccctcg
      721 gtcatcgcgc tgcctggcgg actttgattg gcagcatccg ggcgacgtgc tggccggacg
      781 acgccgaata tgcgatcaga aacctgccgg ccagagtccg catcagaacg atcatggatc
      841 gtgcggcccg gcgcgaaacg ccctcaccac caaggaagga acccgatcat gaccgctcgt
      901 accgccccgc cgttccgtgc cgatcatgtc ggaagtttgc tgcggcccaa agaactgcaa
      961 tcggcgcgcg ctgcgtggaa aggcgggaac ctgacccatg acgcgctgcg tgaagtcgag
     1021 gatcgttgca tcgtcgctgc aatcgcgaag caggaggcga tcgggctccg cgccgccacc
     1081 gatggcgaat accgccgcgc ttattggcat tatgacttcg tcgccggtct ggacggcgtc
     1141 gagatctatg agccggagca gaaaatccag ttcaagggcg gcgtgccgct gacgcacatg
     1201 ctgcgggtca atggccgcat cggcttcagc aaaccgatca tgctggacga ttacaaatac
     1261 gtcgcctcgc acgtccacgc ggcgatgccg aaacaaacca tcccgtcacc ttcggtcgtg
     1321 catttccgcg gtgggcgcaa tgcgatcgac caaacatcgt atccgggatt ggacagtttc
     1381 ttcgccgacc ttggtgaggc ctataaccag gccgttgcct ccttcggcgc cgccggttgc
     1441 aaatatctgc agatcgacga ggtcaacatt gcctatctgt gtgatcccga acagatcgcc
     1501 gcccttaaag cccgcggtga gcacgtcgac aatctgctgc atatttacgg cgccatgctg
     1561 aaccgcgcga tcgaggcgcg gcctccgggc atgaccatct ccatgcatct ttgccgcggc
     1621 aatttccgtt ccacattcgt cgcaaccggc ggctacgaac cggtcgccga ggtgctgttc
     1681 aac
//
LOCUS       DATAVD010000396         2205 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_967905, whole genome shotgun sequence.
ACCESSION   DATAVD010000396 DATAVD010000000
VERSION     DATAVD010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_967905"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            285..1070
                     /locus_tag="VHX39_07380"
     CDS             285..1070
                     /locus_tag="VHX39_07380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007396944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HEX3990978.1"
                     /translation="MGYWGKVLGGMAGFAMGGPFGAAIGAALGHAADTGMGQGFSFPF
                     STTANSIAGQAKVAALLGQKQQLFSIAVVALSAKLAKCDGPVKRAEIDTFRRQFRIPD
                     TGVREIGRLFDRARESTDDFRSYATQLGDAFADNHPMLELVLGSLFAIARADGEVNAR
                     EKDFLWGVHRAFRLDRTAWDRASGAAPPRPSADEPDPYEILGVARSADGTELRAVWRK
                     LMRENHPDALAARGVPPEFIEKASASVARINAAWDRIKRERGL"
     gene            1138..1872
                     /locus_tag="VHX39_07385"
     CDS             1138..1872
                     /locus_tag="VHX39_07385"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEX3990979.1"
                     /translation="MTLTIRERLSPNHDERPIDEPVDMLILHYTGMQTAQEAIDRLCD
                     PEAKVSSHYVVDEDGSILRLVPEDRRAWHAGVSFWRGHSVLNGRSIGIEIVNPGHEWG
                     YRDFPALQMAAVCDLCLAILSRHRIAARNVVAHSDVAPDRKEDPGERFDWEGLARNGV
                     GLWPVEVPDRGTGGVVRDAGGLRPVRAALTRVGYDVAPEGALDPALATVLRAFQRHWR
                     QEAVSGQADAGTVARLEAIAEMVGGG"
     gene            1926..>2205
                     /locus_tag="VHX39_07390"
     CDS             1926..>2205
                     /locus_tag="VHX39_07390"
                     /inference="COORDINATES: protein motif:HMM:NF022115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2478 domain-containing protein"
                     /protein_id="HEX3990980.1"
                     /translation="MGTAIETIAVVQGAPDATVQQIFRTLIDQWRPSARIVGVTAETH
                     GLAGRACSAGFLRNVGTDELFPIFQDLGPGSTACHLDGASMLPATEAVR"
BASE COUNT          380 a          651 c          782 g          392 t
ORIGIN      
        1 cgtcgtatcg cggggcatac aagggtccgc gcggatgatg ctgattgtag gcgaccatac
       61 atccctccgc ggcctggatg ttcgagaagg ttgtcgcata gagcggaatc gccacagctg
      121 acaagtcaac aatgttcggg acagagaacg gccggacccc gctacccgat tggcggcagg
      181 tgccgctgga ccgcacatcg aacgttcccg cccgcattcc gttttgctcc ggtaaacctt
      241 cgcgtgctaa gcgcatgcag agtcggcagg tgccagtcac gcgcatggga tactggggca
      301 aggttctcgg aggtatggcc gggttcgcca tgggcggccc gttcggcgct gcaatcggcg
      361 ccgcactggg ccatgccgcg gataccggca tgggacaggg gttttcgttc ccgttttcga
      421 cgacggcaaa ctcgatcgcc gggcaggcaa aggtggcagc cctgctcggc cagaagcagc
      481 agttgttctc gatcgccgtg gttgcgttgt cggcaaagct tgccaaatgc gacggtccgg
      541 ttaagcgcgc cgaaatcgac accttccgcc gccagttccg cattcccgat accggcgtgc
      601 gggagattgg ccggctgttc gaccgggcgc gcgagagcac cgacgatttc cggagctacg
      661 ccacgcagct tggcgatgcc ttcgccgaca atcacccgat gctggaactg gtcctcggtt
      721 cgttgttcgc cattgcccgg gcggacggcg aggtcaatgc cagggagaag gattttctgt
      781 ggggtgtgca ccgcgccttt cgtctcgacc ggacggcgtg ggaccgggcc agcggggcag
      841 cgccgccgcg accgtccgcc gatgagccgg atccctacga gatactgggc gtcgcccgct
      901 cggccgatgg cacggagctg cgagcggtct ggcgaaagct gatgcgggag aatcacccgg
      961 atgctctggc ggcccgcggg gtgccgccgg agtttatcga gaaagccagc gcttcggtcg
     1021 cccgtatcaa cgcggcctgg gatcgcatca agcgggagcg cgggttgtga ggttttccac
     1081 cgctgagcgc aggcgggagc agtcgtggca gctcgtcatg tggagcggct ggccggcatg
     1141 actctgacga tccgcgaaag actcagcccc aatcacgatg aacggccgat agacgaaccg
     1201 gttgacatgc tgatcctcca ttacaccggt atgcagacag cccaggaggc gatcgatcgg
     1261 ctgtgtgatc cggaggcaaa agtttcgtcg cactacgtcg tggacgagga cggctcgatc
     1321 ctgcgtctgg tgcccgagga tcggcgggcc tggcacgcag gggtgtcgtt ctggcgaggc
     1381 catagcgtgt tgaacggccg ctcgattgga atcgagatcg tcaatccggg ccacgaatgg
     1441 ggttatcgcg acttcccggc gttgcaaatg gcggcagtgt gtgatttgtg cctggcgatc
     1501 ctgtcacggc accgtatcgc ggcgcgtaac gtggtggcgc acagcgacgt ggcgccggac
     1561 cggaaagaag acccaggcga gaggttcgac tgggaggggc ttgcccggaa tggcgtcggg
     1621 ctttggccgg tcgaggtacc ggaccggggt acgggcgggg tggtccgcga tgcaggtggg
     1681 ctgcggccgg tgcgagcggc gctgacccgg gtcggatatg atgttgcgcc agagggcgcg
     1741 ctcgatcccg cgctggccac cgtactgcgc gcgttccagc ggcattggcg gcaggaggcg
     1801 gtgagcggcc aggcagatgc cgggaccgtg gcgcggctgg aggcaatcgc ggagatggtg
     1861 ggcggcggat aaaggaagtc ttgaccaggt tctggacacg atgaccagga aggaggcacg
     1921 acgccatggg taccgccatc gagacgatcg ccgtggttca gggcgcgcca gacgcgactg
     1981 tccagcagat tttccgcacg ctgatcgatc agtggcggcc gtcggctcgt attgtcggcg
     2041 tcactgccga aacccatggt cttgccggtc gggcctgtag tgccggcttc cttcgcaacg
     2101 tcggcaccga tgaactgttt ccaatcttcc aggatctcgg acctggctcg acagcatgcc
     2161 atctggacgg cgccagcatg cttcccgcaa ctgaagcagt ccggc
//
LOCUS       DATAVD010000397         3713 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_38006, whole genome shotgun sequence.
ACCESSION   DATAVD010000397 DATAVD010000000
VERSION     DATAVD010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3713
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38006"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..897)
                     /locus_tag="VHX39_07395"
     CDS             complement(<1..897)
                     /locus_tag="VHX39_07395"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990981.1"
                     /translation="MDDKTVLYRQLIRLPNVLALLSATGLSRLANRIFAIAIVFHALA
                     AFGSPTIAGWTAFAAFAPGLLISPLAGALLDRAGAIRGIVADLSFSAALALLLAWAIQ
                     AGWASPPVVIGLAAAYALSSPLSAAGIRVLLPRLVPAAALDRANALDTAVDAIVDVAG
                     PSFAGVLVGFAGSTIAFVVSAAVYAAATLCVVLIRGTSPPTQPTAAFLSQALQGLGFV
                     LGRPVLRGLALGYALNMVTWGMLWVVVPVSVARNVSTGNWETVSGLLLAGTGIASGAG
                     ALLAGQIGLFGREVRGMTVGMIV"
     gene            complement(983..2323)
                     /locus_tag="VHX39_07400"
     CDS             complement(983..2323)
                     /locus_tag="VHX39_07400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019825 - oxygen binding [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="globin-coupled sensor protein"
                     /protein_id="HEX3990982.1"
                     /translation="MAQPNDDDLATRTRFIGLDPASCASLSAFWPAIEPELPAILDGF
                     YQHVMTIPPLRKMVGVQVPRLKQAQIAHWRRLFSGRFDAAWLSGVRSIGQIHHKIGLE
                     PRWYIGGYTYVLNRLVALALRIHRWSPGKLAPLIGAVNAAVMLDMDVSFSVYQEALLE
                     EQAQHGKRLNVLLRMFEGKTAGLVAMVASAATQLEATAREMSATTGETTAQAANVATA
                     VETASINVQTVASAAEELSASVGEIGRQVTQSSEIANQAVADANRTDRIVKTLAEGAQ
                     KIGEVVSLISAIAGQTNLLALNATIEAARAGDAGKGFAVVAAEVKGLANQTAKATDDI
                     RQQVAQIQVATKEAVTAIEAISFTIGELSQIATAIASAVEEQGTATQEIARNVHEAAM
                     ATKHVSDNISGVSRGAMQTGKAASGVLGAASDLSRQAEQLSGEVHQFTVDVKAA"
     gene            2547..2867
                     /locus_tag="VHX39_07405"
     CDS             2547..2867
                     /locus_tag="VHX39_07405"
                     /inference="COORDINATES: protein motif:HMM:NF015597.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LOG family protein"
                     /protein_id="HEX3990983.1"
                     /translation="MLRTQVRCILRFGCADRETFEVLNPVQTRKIAPLPVVLVGEAYW
                     RRVFDPDFLVDEGMIDPEDRELFWFAETAEATWHTILRWYETAGTPLLDPDGNEGKPA
                     EGAV"
     gene            complement(3033..3422)
                     /locus_tag="VHX39_07410"
     CDS             complement(3033..3422)
                     /locus_tag="VHX39_07410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007400229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEX3990984.1"
                     /translation="MLAIDKTVIVRYLTGDHPAQSARARALIDAELVFVSLTVLLDTE
                     RVLRNVYGYEPTQIARALRGFAGLSQVTTEDPALVAQGLEWLEGGMDFADALHLAKAA
                     GCAEFVTFDRRLVRSANWPGAVPVRRI"
     gene            complement(3406..>3713)
                     /locus_tag="VHX39_07415"
     CDS             complement(3406..>3713)
                     /locus_tag="VHX39_07415"
                     /inference="COORDINATES: protein motif:HMM:NF015947.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HEX3990985.1"
                     /translation="SLTTNRSNPMAVPGQFTTIVSTKGQVILPKPVRDQHRWDSGTRL
                     IVESTGDAVVLKAASVFPPTRAQDVFGSLPRRGGPKTVAEMKAGSETETDRRHARDR"
BASE COUNT          710 a         1175 c         1173 g          655 t
ORIGIN      
        1 tacgatcatt cctacggtca ttccgcggac ttcacggcca aacagtccga tctggccggc
       61 gagcagcgca cctgccccgc tcgcgatccc ggtgccggcc aggagtaagc cggagacagt
      121 ttcccagttg ccggtcgaga cattcctggc gacggacacc ggcacgacga cccagagcat
      181 gccccaggtg accatgttca gagcgtaacc tagtgcgagg ccgcgcagca ccggcctgcc
      241 gaggacaaaa cccagacctt gcagcgcctg gctgaggaaa gctgcggtcg gttgggttgg
      301 cggcgaggtt ccccggataa gcacgacgca gagcgttgcc gcagcgtaaa cggccgcgct
      361 cacaacgaag gcaatggttg atccagcgaa accaaccaat acgcctgcaa acgacggtcc
      421 cgccacgtcc acgatggcgt cgaccgcggt atccaacgcg ttcgcccggt caagcgcggc
      481 tgccggcacc aggcgcggca acaggacccg gatccccgcg gcactgagcg ggctgctcag
      541 agcgtaggcc gcggccaacc caatcacgac gggtgggctc gcccatccag cctggatggc
      601 ccaggcgagc agaagtgcca gagcggcgct gaaactgaga tcggcaacga tgccgcggat
      661 cgctccggct cgatcgagca acgcgccggc gagcggactg atcaggaggc cgggtgcgaa
      721 ggcggcgaag gccgtccaac cggcaatggt cggtgacccg aacgcggcca gcgcgtgaaa
      781 cacgatcgcg atggcgaata ttcggttggc cagacgggac aaaccggtcg ccgacagcaa
      841 cgcgagcacg ttgggcaacc ggatcaattg cctgtacaaa accgttttgt cgtccatccg
      901 ccgaccctaa catcggccca caccgagagt cagacacagg ccgatcctca gggcgcagat
      961 ccccgggcca gcggtccgcc gctcacgccg ccttgacgtc aacggtgaac tgatggacct
     1021 cgccgctgag ttgctccgcc tggcgcgaca ggtcggacgc ggcgcccaac accccggagg
     1081 ccgccttgcc cgtctgcatg gcgccgcggc tgaccccact gatgttgtca ctgacgtgtt
     1141 ttgtcgccat cgccgcctca tggacgttgc gggcgatttc ctgggttgcg gtgccctgtt
     1201 cctcgaccgc tgaggcgatc gcggtggcga tctggctcag ttcgccgatg gtaaacgaga
     1261 tcgcttcgat cgcggtcacc gcctccttgg tggccacctg aatttgagca acctgttggc
     1321 ggatatcgtc ggttgccttc gcggtctggt tggccaggcc cttgacctcg gcggcgacca
     1381 cggcaaagcc cttgccggca tcgcccgccc gtgctgcctc gatcgttgca ttcagcgcaa
     1441 gcaaattggt ctggccggcg atggcgctga tcaggctgac aacctcgccg atcttctgcg
     1501 cgccttccgc cagggtcttg acgatacggt cggtgcggtt ggcgtccgca acggcctggt
     1561 tggcgatttc cgacgactgg gtcacctggc ggccgatttc gccgacggaa gccgacaatt
     1621 cctcggcagc ggaggcaacg gtttgcacgt tgatactcgc tgtctcaacc gcggtggcga
     1681 cgttggcggc ctgcgcggtg gtctcaccgg tggttgccga catctcccga gcggtggctt
     1741 ccagttgtgt cgccgctgac gcgaccatcg cgacgagacc cgcggttttc ccctcaaaca
     1801 tgcgcaacag gacgttgagg cgtttgccgt gttgcgcctg ttcctccagc agcgcttcct
     1861 gatacacgga aaacgaaacg tccatatcga gcatgaccgc ggcgtttacc gcgccgatga
     1921 gtggagcaag cttgcccggg gaccagcgat ggatgcgcag cgccagcgcc accagccggt
     1981 tgagcacata ggtgtagccg ccgatatacc aacgcggctc gagcccgatc ttgtgatgga
     2041 tctgaccgat cgaccggacg ccggagagcc aggcagcatc gaagcggccg gagaataacc
     2101 gccgccaatg cgcgatctgt gcctgcttca gtctgggaac ctggactccg accattttcc
     2161 ggagcggcgg gattgtcatg acatgttgat agaaaccatc gaggatggca ggcagttccg
     2221 gctcgatggc gggccagaat gcgctcagcg aggcgcagga ggctggatca agcccgataa
     2281 agcgggtgcg tgttgcgaga tcgtcatcat tcggttgtgc catacgatcg ggctcctgag
     2341 ccggcggttg ctgcgtcccc cgggtcaacc tggcgagcgg agcggcagta tcgcgctgga
     2401 tgatgaacag gaagtaaatg cgtcctgcgt caaaagcgaa atttcaagcg tcagtttggc
     2461 tccccacaga acgggcgagg cactatcaga ttcgagcttt caccaggcaa tgcgctgcct
     2521 tcggtcatca actgcgcagg tcgcagatgc tcaggacgca ggttcggtgc atcctccgct
     2581 tcggctgcgc tgacagggaa accttcgagg tgctgaaccc ggtgcaaacc cgcaaaattg
     2641 cgccgctgcc ggtcgtgttg gtcggcgagg cttattggcg gcgcgtgttc gatccggact
     2701 ttctggtcga cgagggcatg atcgacccgg aagaccgcga attgttctgg ttcgcggaaa
     2761 ccgctgaggc aacctggcac accattctac gctggtacga aacggcgggc acgccgctgc
     2821 tggacccgga tggaaacgaa ggaaaaccgg ctgaaggcgc ggtttgaccc gcactccatg
     2881 atcgctggcg acgggcagcg tgaggcggaa cattccgtca ttatcgcatc aggcgaacaa
     2941 accacaatca aaccaggaac acgatggaat ggtgtttccg ctcagtaccc cgacggcgac
     3001 cggggactgg cctgcgccga ttcggcagcc gcctaaatcc tgcgcaccgg cacagcgcca
     3061 ggccagttcg ccgagcgtac gagccttcgg tcaaaggtga cgaattcggc gcaaccagcg
     3121 gcctttgcca aatgcagtgc atcggcaaaa tccattcctc cctccagcca ctccaatccc
     3181 tgggcgacca gcgccgggtc ttccgtggta acctgagaaa gcccggcgaa cccgcgcaaa
     3241 gctcttgcga tctgggttgg ctcgtagccg taaacgttac gcaggacccg ttccgtgtcg
     3301 agcaaaacgg tcaaactgac gaacactagt tcggcgtcga tcaaagctct cgcccgcgcc
     3361 gactgggcgg gatggtcgcc agtcaaatag cggacgatta cggttttatc gatcgcgagc
     3421 atggcgccga tccgtttcgg tctcgctgcc ggctttcatt tccgcaacgg tttttggccc
     3481 gccgcgccgt ggcagggagc cgaacacatc ctgcgcccgg gttggcggga acaccgaagc
     3541 agccttcagc accacggcgt cgccggtgct ttccacgatc aggcgggtac cggaatccca
     3601 gcgatgttgg tcgcggacag gcttgggcaa gatgacctgg cccttggtcg acacgatcgt
     3661 cgtgaattgt cccggcacgg ccattgggtt gctcctgttg gtagtaagac tct
//
LOCUS       DATAVD010000398         3628 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_408831, whole genome shotgun sequence.
ACCESSION   DATAVD010000398 DATAVD010000000
VERSION     DATAVD010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3628
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408831"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..253)
                     /locus_tag="VHX39_07420"
     CDS             complement(<1..253)
                     /locus_tag="VHX39_07420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3990986.1"
                     /translation="MTLTDLLLQQTINGLSLGAMYALLALGFTLVYGILELINFSHFN
                     VFMVGSFIAMGVLQLFGLKGQDIILTGLPLAGVLLVTFAV"
     gene            complement(276..1517)
                     /locus_tag="VHX39_07425"
     CDS             complement(276..1517)
                     /locus_tag="VHX39_07425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX3990987.1"
                     /translation="MITRRAAARLFVGTAATAALGTGTTPAWAEDKVVKIGADLSLTG
                     ADAENALRVKNGIVMAIDAANAKKTVKGYTFELLTLDDGTATAGQYDPAQAATNARKM
                     VSDPAVVAAVGPEMSGSGKAMAPILSQGDLATITPSSTNPDITSPKFAEQYRPAGKPI
                     YFRTVTTDAFQGPNMANFMAEKLKIKTVYILDDSGAYGVGLADAYQAQIEKKGVKVLG
                     RDRLDPKAADYSAVLTKIKALDPQALYYGGVGQAGTKLAKQAFDIIPGTIKAGGDGVY
                     GATFLTGVGFPAAEGWYATIASPHLTDNSKAATFVKEYSARFGVAPTDYSITAYDATL
                     VIIDAVKRVAATGKPVERSAVRDAIQKSKVETIQGIVSFDENGDLADRTVSVFQIKKD
                     TNAKLDDVSAQYHYIDVAPQV"
     gene            complement(1652..2545)
                     /locus_tag="VHX39_07430"
     CDS             complement(1652..2545)
                     /locus_tag="VHX39_07430"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3990988.1"
                     /translation="MTISVRRLHDLFVGEVSGVDLTQPVVPADVAALEAAIAEHAVLV
                     FRDQRITDDQQLVFSRHFGELEETRGTGISKPGEQRLHPAFADVSNLDKDNTVLARDN
                     RRRLYSLGNMLWHSDSSFKTIPAAYSLLSGRVVVEHGGATEFADMRAAYDTLDAATKT
                     EIADLICEHSLIYSRELLGFDDLTEAERATMRPVRQALTRIHHISGRKSIYLASHIGK
                     IIGWPVPEARAFIRDLTEHATRPQFVYSHQWRPFDLVMWDNRCTMHRVRRYDASQVRD
                     MRRTTVAGTAPTVAQVSIAAE"
     gene            complement(2549..3445)
                     /locus_tag="VHX39_07435"
     CDS             complement(2549..3445)
                     /locus_tag="VHX39_07435"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3990989.1"
                     /translation="MSIRAVQNGFVGEVTGIDICKPLSSDQVAEIERGMDQYAVLTFP
                     DQPLTDEQQVVFSQSFGSLEITLAGQMAKPEDRRFQQLELGDISNFNGADTTRLRARD
                     DKRRMYALANRLWHSDASFRAIGAGYTLLHARIVPNRGADTQFADMRAAYDALSPSEK
                     AEVEDLVCEHSIVFSREQIGFGDYNPGHEEHLKPVPHRLVITHPKTGRKSLYLSSHIG
                     GIVGWPVPEARAFIRDLAEHATQPQFVYSHKWRVGDMVIWDNRTVMHRATRFRDLEEV
                     RDLRRTSIKGTGLEVKQAMAAE"
BASE COUNT          688 a         1074 c         1114 g          752 t
ORIGIN      
        1 tgacggcgaa cgtgaccaac agcacgcccg ccagcggcag gccggtcagg atgatgtcct
       61 gacctttgag gccgaacagt tgcagcactc ccatggcgat gaacgagccg accatgaaga
      121 cgttgaagtg ggaaaaattg atcagctcca ggatgccgta aaccagggtg aacccgagcg
      181 cgagcaaagc gtacatcgcg cccagactga gaccgttgat ggtctgctgg agcagcaggt
      241 cagtcagggt cattgttgtg gtcaggtctg agggatcaga cctgcggcgc cacgtcgatg
      301 tagtggtatt gcgctgacac gtcgtccagt tttgcgttgg tgtctttctt gatctggaac
      361 acgctgacgg tgcggtccgc aaggtcgccg ttttcatcga acgacacgat gccctggatg
      421 gtctctactt ttgacttctg gattgcgtcg cgcactgcgc tacgctcgac cggcttaccg
      481 gtggcagcga cgcgtttgac cgcgtcgatg atcaccaaag tcgcgtcgta ggcggtaatg
      541 gaatagtccg tcggggcgac gccgaaccgt gcagaatact ccttgacgaa ggtcgccgcc
      601 ttggaattgt ccgtcaaatg cggcgaggcg atcgtggcat accaaccttc cgccgccggg
      661 aagccgacgc ctgtcagaaa ggtggcgccg taaacgccgt cgccgcccgc tttgatcgtg
      721 cccggaatga tgtcgaaggc ctgcttggcc agtttggtgc cggcctggcc gaccccgcca
      781 tagtatagtg cctgcgggtc cagcgccttg atcttggtga gcaccgccga atagtccgcg
      841 gctttcggat ccagccggtc gcggccaaga accttgacac ccttcttctc aatttgcgcc
      901 tggtatgcgt ctgccagtcc gaccccgtat gcgccgctgt cgtcaagaat atagacggtt
      961 ttgatcttga gtttttcggc catgaagttg gccatgttag gtccctggaa ggcatccgtg
     1021 gtgaccgtgc ggaaatagat cggtttgccg gccgggcggt actgttcagc gaacttagga
     1081 ctggtgatgt ccgggttcgt cgaactgggc gtaatggtgg ccagatcgcc ttgactcaga
     1141 atgggcgcca tcgccttgcc ggaaccactc atttccgggc cgaccgccgc cacgacagcg
     1201 ggatcggaca ccatcttgcg ggcgttggtc gccgcctgcg ccggatcata ttggcccgca
     1261 gtggcggtgc catcgtccag cgtcagcagt tcgaacgtgt agcccttgac ggtttttttg
     1321 gcgttggcag catcgatcgc cataacaatg ccgttcttga cccgcagggc attttccgcg
     1381 tcggcgccgg tcagcgacag atcggctccg atctttacca ccttgtcctc cgcccacgcg
     1441 ggagtggtcc cggtgccaag cgcggcggtg gctgcggttc caacaaacaa acgagcggca
     1501 gcgcgacgtg tgatcattat ggtctccctg ctcatcgagc actattgcca gcgacccgcg
     1561 acagcgagcc cagtgattcg agcacgacgc agaattgaac ggtccgccca ttctgggcaa
     1621 ggggggattg gtgaggggag cccgacagcg gttattctgc tgcgatcgac acctgagcca
     1681 cggtcggcgc ggtgcctgcc accgtcgtgc gccgcatgtc tcgaacctgc gacgcatcgt
     1741 agcggcgaac gcggtgcatc gtgcagcgat tgtcccacat cacgaggtcg aacggccgcc
     1801 attgatgcga gtacacgaac tgaggccggg ttgcatgctc ggtcaggtca cggatgaagg
     1861 cgcgtgcctc gggcaccggc cagccgatga ttttgccgat gtgcgacgcc agatagatcg
     1921 acttccggcc actgatgtga tggattcggg tcaacgcctg acgcaccggt cgcatcgtgg
     1981 cacgttctgc ctcggtcaga tcgtcgaacc caagcagctc gcgcgagtag atcaacgagt
     2041 gttcgcagat cagatcggca atttcggttt ttgtcgcagc gtcgagcgtg tcgtaggcgg
     2101 cacgcatgtc ggcgaactca gtcgcaccgc catgttcgac cacaacgcga ccggatagta
     2161 acgaatatgc ggccgggatc gttttgaacg aactgtccga atgccacaac atattgccaa
     2221 ggctgtacaa ccggcgacgg ttgtcgcgcg ccagcacggt attgtcctta tccagattgg
     2281 acacatcggc gaaggcagga tgcagccgct gctcgccggg cttgctgatg ccggtgccgc
     2341 gggtttcctc cagttcgcca aaatgacgac tgaataccag ttgctgatcg tcggtgatgc
     2401 gctgatcgcg gaacaccagg acggcatgtt ccgcgatcgc tgcttcgagc gcggcgacat
     2461 ccgccggcac gacaggctgt gtcaggtcga cgccgctgac ttcgccgaca aacagatcat
     2521 gcaggcgccg gacgctgatc gtcatggatt attccgccgc catcgcctgt ttcacttcga
     2581 gcccagtacc cttgatcgag gtgcggcgca gatcacgcac ttcttcgagg tcgcggaacc
     2641 gcgtggcgcg gtgcatgacg gtacggttgt cccaaatcac catgtcaccg acacgccatt
     2701 tgtgactgta aacaaactgc ggctgcgtcg cgtgttcggc gagatcgcgg atgaacgcgc
     2761 gcgcttccgg caccggccag ccgacgatgc cgccgatatg cgacgacaga tacagcgact
     2821 tacgtccggt tttcggatgc gtgataacca gccgatgcgg cacgggcttc agatgttcct
     2881 catggccggg attatagtcg ccgaaaccga tttgctcgcg agagaagacg atcgagtgtt
     2941 cgcagaccag gtcttcgact tcggcctttt ccgacgggct tagcgcgtca taggcggcac
     3001 gcatatcggc gaactgggtg tcggctccgc gatttggtac aatacgggca tgcaacaacg
     3061 tgtagccggc gccaatcgcg cggaacgagg catccgaatg ccacagccga ttggcgagag
     3121 catacatccg gcgtttgtcg tcgcgagcgc gcagccgcgt ggtgtccgcc ccattgaagt
     3181 tggagatgtc gccgagttca agctgttgga aacggcgatc ctcaggtttg gccatctggc
     3241 ccgcaagggt gatctcgagt gaaccaaaac tctgcgagaa gacgacctgt tgttcatcgg
     3301 tcagcggctg gtcgggaaag gtcagcacgg cgtattggtc catgccacgc tcaatttccg
     3361 ccacctggtc gctgctgagc ggcttgcaga tgtcgatccc ggtgacctcg ccgacaaagc
     3421 cgttctgaac cgcacgaata ctcattccat tgatctcctt atattacgct gcttcctgga
     3481 tttgggccgt ggtcacgcca tcaccccgga tggtggtacg ccgcatgtcg cgcacctccg
     3541 tcagatcgtt gtagcgccgt gctcgatgca ttgtggtgcc attgtcccag atcaccaggt
     3601 cccattgccg ccagacatga gcatagac
//
LOCUS       DATAVD010000399         2457 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2644021, whole genome shotgun sequence.
ACCESSION   DATAVD010000399 DATAVD010000000
VERSION     DATAVD010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2457
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2644021"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..530
                     /locus_tag="VHX39_07440"
     CDS             <1..530
                     /locus_tag="VHX39_07440"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3990990.1"
                     /translation="GRLDILVNNAGAPQGADRNEIEDVPVEAWDETMAVNARGAFLMS
                     RAAVPAMRKAGWGRIVCVSSKAAFRPGKRRATYAASKAAIVGFVKSLSLDLAAAGITV
                     NAVLPGPIRTTRAISTNRREFGDDLERGFAERSKAIPVGRFGSPDEVAAAIAFLASDG
                     ASFVTGQTIGVDGGW"
     gene            527..1279
                     /locus_tag="VHX39_07445"
     CDS             527..1279
                     /locus_tag="VHX39_07445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3990991.1"
                     /translation="MSTIEVSAGGYRYIPGAFQYSSGVGALDGFQIERVSLQTPVPLV
                     AGFAFIERYMTSQGVPLLAFCACELRSPAPFTEDGFISFNRHYCGTLERWGIMTGDNN
                     PVARSNVCPELDKPAEPSFHAFCFARKTPGAPGSFVIAGSGEAEEGHASYRERIVRFG
                     DTGPAGMREKAVFVLGCMERRMAALGKAWSDTTSVQAYTVYDLHPFLQDEIVLRGAAR
                     HGLTWHLARPPVQGLDYEMDCRSVPVEHHVNI"
     gene            1396..>2457
                     /locus_tag="VHX39_07450"
     CDS             1396..>2457
                     /locus_tag="VHX39_07450"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3990992.1"
                     /translation="MAIASPSHADFEPISSGRRRVLSVACCAHALHDGYTDLIYVLLP
                     VWQTEFALSYAALGALRMLYTGAMAGMQMPAATLAGRLGVPLVLALGTALAAGAYLTV
                     GLGSAGFVLLAAALLAGGVGSSTQHPLASALIARAYDRPAARAALGTYNFAGDLGKMA
                     VPATLSGLLVLMPWRSALGLIGVGGLVVAFAVLLLLPRGLAEPRTPPKAALHHAAAQP
                     RDRFAFPLLLTIGVLDSGTRMGFLAFLPFILREKGATAPMIGLALTLVFAGGAAGKLT
                     CGLLGAKLGVLRTVLLTEFGTAAGIVLLAHLPLPGALASLVLIGVALNGTSSVLYGTV
                     PELVTSERCEKAFSLFYTGT"
BASE COUNT          383 a          765 c          813 g          496 t
ORIGIN      
        1 acggtaggct ggatatcctg gtgaacaacg ccggcgcccc gcaaggggcg gatcgtaacg
       61 aaatcgagga cgtgccggtc gaggcctggg acgaaaccat ggcggtcaat gcgcgcggtg
      121 cctttctgat gtcgcgcgcc gcggttcccg ccatgcgcaa ggccggctgg ggacgcatcg
      181 tttgtgtgtc atccaaggcc gccttccggc ccggcaaacg gcgcgccacc tacgccgcat
      241 caaaagccgc gatcgtcggc ttcgtgaagt cgctgtcgct cgatctggcc gcggcaggga
      301 ttaccgtgaa tgccgttctg ccgggcccca ttcgcactac gcgggcgatc agcaccaacc
      361 ggcgggaatt cggcgacgat ctggaacgcg gttttgccga gcgatccaag gccatcccgg
      421 tgggccgctt cggctccccc gatgaggtgg cggcggcgat tgcgtttctg gcctcggatg
      481 gcgccagctt cgtgaccggt cagaccatcg gtgtggacgg cgggtggtga gcacgatcga
      541 ggtctctgcc ggcggttacc gttacattcc gggtgcgttc cagtactcgt ccggcgtcgg
      601 tgcgctggat ggtttccaga tcgagcgggt gagcctgcaa actccggtgc cgctggtggc
      661 aggctttgcc tttattgaac gatatatgac gtcccagggg gtgccattgc tggcgttctg
      721 cgcctgtgag ctgcgctccc ccgcgccatt caccgaggat ggcttcatta gtttcaaccg
      781 gcactattgc ggcacgctgg agcgttgggg aatcatgacc ggcgacaaca atccggtcgc
      841 ccgtagcaac gtctgcccgg agctcgacaa acccgccgag ccgtcgttcc acgcgttctg
      901 cttcgcccga aaaacgccgg gtgcgccagg gtccttcgtc atcgccggca gcggtgaagc
      961 cgaagagggc catgcgtcgt accgggaacg catcgtccgt ttcggcgata ccggtcccgc
     1021 cggtatgcga gagaaggccg tgttcgtgct tgggtgcatg gaacggcgca tggcggcatt
     1081 gggcaaagcc tggtcggaca cgacttcagt gcaggcttac acagtgtacg acctgcatcc
     1141 gtttctgcag gacgaaatcg tcctgagggg tgcggcgcgg cacgggctga cctggcatct
     1201 ggcaaggccg ccggttcagg gtctcgatta cgaaatggat tgccggtctg tgccggttga
     1261 gcatcatgta aatatttgat atctaacaaa gtcccgtcgc cagtcatata gacatctaga
     1321 caaatcgaat catcctccgt cttcacccta ccgccaccag ggcccatatc tgtgtcccaa
     1381 ccggaggacg caggaatggc catcgccagt ccctcgcacg ccgactttga acccatctcg
     1441 tccggccgcc gccgggtcct gagtgtcgcg tgctgtgcgc acgctttgca cgacggctat
     1501 accgacctga tctacgtcct gctgccagtc tggcagaccg agttcgcgct gagctatgcc
     1561 gcacttggcg cgttgcggat gctttacacc ggcgcgatgg ccggaatgca aatgcccgcc
     1621 gccacgctcg ccggccgttt gggcgtgcca ctggtgttgg cgcttggcac agcgctggcc
     1681 gccggcgctt atctgacggt cggtctcggc tcggccggct tcgtgctgtt ggcggcagca
     1741 ctactggccg gcggggtcgg atcgtcaacg caacatccgc tcgcatcggc actgattgcg
     1801 cgcgcctacg accggccagc tgcgagggcg gcgctcggga cctacaactt cgccggcgat
     1861 ctggggaaga tggcggtccc ggcaacgctt tctgggctgt tggtgctgat gccgtggcgt
     1921 tccgcgcttg ggctgatcgg cgtgggcggg ttggtggtcg cgttcgcggt gctcctcctg
     1981 ctgccccgcg gtttggccga accgcgcacg ccgcccaagg ccgctttgca tcacgcggcg
     2041 gcccaaccac gcgaccggtt cgcattcccg ctgttgctga ccatcggagt gctggacagc
     2101 ggcacacgga tggggttcct ggcctttctg ccgtttatct tgcgcgagaa aggcgccacg
     2161 gcaccgatga tcgggctcgc tttaaccttg gtgtttgccg gcggagcggc gggtaaactg
     2221 acgtgcggtc ttctgggcgc gaaactcggt gtgttgcgaa ccgtgttgct gacggagttt
     2281 ggcaccgctg cgggcatcgt gctgctggcc catctgccgt taccgggtgc actggccagc
     2341 cttgtgctga tcggcgtggc actgaacggc acctcgtcgg tgctctacgg aacggtaccg
     2401 gaactggtca catccgagcg gtgcgagaag gcattcagtc tgttctatac cggaacg
//
LOCUS       DATAVD010000400         5160 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3014417, whole genome shotgun sequence.
ACCESSION   DATAVD010000400 DATAVD010000000
VERSION     DATAVD010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5160
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3014417"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1514
                     /locus_tag="VHX39_07455"
     CDS             <1..1514
                     /locus_tag="VHX39_07455"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3990993.1"
                     /translation="RVYNPSVASLRLTIKVLRPTTGASTWRWRVSVYKKRPRLWRITG
                     TGRIIMDRTVKGPGSHIVTRRGLLKTGMGVGAAGLLVPLTTPHVWAKTYPTMGTFPEG
                     VQGKSVFAAGLFPLTGAYASLGNDEKKGFELAIEHLNNGSQVTEAVPSLKKGGGVLGK
                     KVEYGIADSQTHSNPAVQAASRFIDTNKAMVMTGAISSAIAVALEELGQRKKVLYFGD
                     VTASNDTTGKDCQRFGFRLMPDNYMFCQALAPVLAKQLGHNLKAAYLVPDYTFGTSLY
                     SSLTQAFAKYGWTSVSEQLAPIGTTDFTSYLLDIANSGAQVMFNETVGADEVTSSKQA
                     VQFGIMQKMKFVIPLASPFIEKPLGPEVLGGMYITLPWYWGMQDKFPLAKYFNEAFHK
                     KFNYVPRYCAAQCYNSMIVWADAVERAGTFYPPEVIKALESGYKVDTIAGQVWFRAED
                     HQGVSPVPVLQGKTKSEIHGDADNYKIIEIVSGEKMMEPLKDNGCHMPDVAAA"
     gene            1563..2441
                     /locus_tag="VHX39_07460"
     CDS             1563..2441
                     /locus_tag="VHX39_07460"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3990994.1"
                     /translation="MPSMALLLSQAFSGFAFGCLLALMSSGLTIIFGTLGFVNFAHGA
                     MFMMGAYVAYVVLASTHSYLLALLAGAVVLAVVAVVLERGLLRFFYTRPPEDQLLVTF
                     GLSVMLIEAMRYIFGSDSQQVSPPSWGDGIVNFGGLFYYPLYRVEVIGVTAAFLLALY
                     LLLYHTSLGLMVRAGIEDRRMVSLLGIDVRKMFLLVFVIGAVAAGVAGVIFAPLSAVI
                     PDMGTPFLIQAFVVVVIGGLGSFGGAIVGGLVVGELLSLTTAFDPAYAQASIYLVMTL
                     VLVLRPRGLFGAVGRI"
     gene            2438..4270
                     /locus_tag="VHX39_07465"
     CDS             2438..4270
                     /locus_tag="VHX39_07465"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     ATP-binding protein/permease"
                     /protein_id="HEX3990995.1"
                     /translation="MSTRAMSRRGGRWVPEIIVAALLISLPFGCAAAFSSVDLLSRIL
                     LWGLFGIGFDLLFGYSGLLSFGQAAFYGTGGFVTAYLLTTHTLSSVWLAMLAGVLAAS
                     VFSLLVGYLALRRVGLYFAMITLAFAQLSFFVENSPLAPWTGGENGLPGIPPPTIHIG
                     SLVYSFAGEWRIYELIATLFFLGYVLARFIVRSPAGAVLAGIRQNADRTAALGHSVPG
                     YKLSVFVLAAAYAGLAGALLGIFQSYMPPGAFSIDTSGQLVFQTVIGGVGTLLGPAIG
                     AAVWLFLRAELQQIPGIGSLWMFILGAIFVLLVTLLRKGLYGSVVAWWQSRRAVAVAP
                     AFVRPRPSAVPATPRVVADASVPSVLEACAVSKHFGGIRAVSDVSLSVPAGEIYAVIG
                     PNGAGKTTFLRMLSGEMVPSAGRILLRGQDITGRSVTAVNQAGIAKSYQVNQLFNDLT
                     GRQNLRIAALARHRGPLRFDVFRAAESIPAVEQSIAGLIEELGLAASADLPVATLAYG
                     EKRRIELGLALATQPSVLLLDEPLAGLSPGERQDVIRLIRRLAEGRTIVLVEHDMDAV
                     FALAARIMVMHEGRPLAEGTPSEIRCDAQVRRAYLGGMAAHVHA"
     gene            4257..4985
                     /locus_tag="VHX39_07470"
     CDS             4257..4985
                     /locus_tag="VHX39_07470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3990996.1"
                     /translation="MSMLEVDAINSFYGDSHVLFDISLRVEEHEVVALLGRNGAGKTT
                     TLNTIAGIIAPRSGSIRFGGTPIEGLASHVIARRGLQLVPEERRIFITLTVEENLQLA
                     ALNAPEAKSMDEIFSIFPRLRERRKATGGTLSGGEQQMLAIARALIRSPRLILLDEPF
                     EGLAPVIVEDLVTLCGGLAEAGTTIVIVEQDVRSALELARRVYVLNNGHVVFEGTRDA
                     LLADPEITSRYLGMGLEIAESLEP"
BASE COUNT          819 a         1439 c         1808 g         1094 t
ORIGIN      
        1 ctcgagtcta taacccctcg gtggcgtcgc ttcgtctgac gattaaagtg ttgcggccaa
       61 caaccggcgc atcgacttgg cgctggagag tgtctgtgta caaaaaaagg ccccgccttt
      121 ggcggataac tggaacaggg agaataatca tggacaggac cgtcaagggc cccgggtctc
      181 acattgtgac gcggcgcggc ttactcaaaa ccggaatggg cgtgggcgcg gccggactgt
      241 tagttccgtt aacgaccccg catgtctggg ccaagacata tcccaccatg ggcacgtttc
      301 cggagggtgt acaaggcaag agcgtctttg cggccgggtt gtttccgctg accggcgcct
      361 atgcgtcgtt ggggaatgac gagaagaagg gcttcgaact tgccatcgag catttgaaca
      421 acggcagcca ggtgaccgag gcggtgccgt cgctgaagaa gggcggcggt gtgctgggca
      481 agaaagtcga atacggcatc gctgacagcc agacccattc caaccccgcg gttcaggctg
      541 cttcgcggtt tatcgacacc aacaaggcga tggtcatgac cggtgccatc agcagtgcga
      601 tcgccgtcgc cctggaggag ttggggcagc gcaagaaagt gctctacttt ggagacgtca
      661 ccgcatccaa cgatacaacc ggcaaggact gtcagcgttt cgggttccgt ctgatgccgg
      721 acaactatat gttctgccag gcgctggccc cggttctcgc caagcaactc ggccacaacc
      781 tgaaggcggc ttacctggtg ccggattaca cgttcggcac gagtctctat agttcgctga
      841 cccaggcctt tgccaagtat ggctggacgt ccgtcagcga acagcttgcg ccgatcggca
      901 ccaccgactt caccagttat ctgctcgata tcgccaacag cggggcgcag gtgatgttca
      961 acgagaccgt gggtgccgac gaagtcacgt catcgaagca ggctgtccaa ttcggcatca
     1021 tgcagaagat gaagttcgtc atcccgcttg ccagcccgtt catcgagaag ccgctgggcc
     1081 cggaagtact tgggggtatg tacatcaccc tgccgtggta ttggggtatg caagacaagt
     1141 ttccgctggc caaatatttc aatgaggcgt tccataagaa attcaattat gtaccacgct
     1201 actgcgctgc ccagtgctac aacagcatga tcgtgtgggc ggatgcggtc gaacgcgccg
     1261 gcacgttcta tccgcctgag gtcatcaagg cgctcgagtc cggctacaag gtcgatacga
     1321 ttgccggcca ggtgtggttc cgagcagagg atcatcaggg cgtcagcccg gtgcctgtct
     1381 tgcaaggcaa gaccaagtcg gaaattcacg gcgacgccga caactacaag atcatcgaaa
     1441 tcgtttcggg tgagaagatg atggagccgc tgaaggacaa cggttgccac atgcctgatg
     1501 tcgcagcggc ctaacgggct ggtgccgctt cgtccacaac agaccagccg ggagaaaagc
     1561 tgatgccttc gatggcactg ctgctttcgc aggcgttcag cggtttcgcg ttcggctgtc
     1621 ttttggcgct gatgagcagc gggttgacga tcatttttgg tacgctgggg ttcgtcaact
     1681 tcgctcatgg cgcgatgttc atgatgggag cctacgtggc ttacgtcgtg ctggcctcca
     1741 cgcattcgta tttactggcg ctgttggccg gagccgtggt cctggcggtc gttgcggtcg
     1801 tgctcgagcg cggcctgctg cgcttctttt acacacggcc gccggaggac caactgctgg
     1861 tgacgttcgg cctgtcggtc atgctgatag aggcgatgcg ctacattttc ggcagtgaca
     1921 gccagcaggt ctcgccgcca tcgtggggcg acgggatcgt caattttgga ggcttgttct
     1981 actacccgct gtaccgtgtc gaggtgatcg gtgttaccgc ggcattcctg ctcgcactgt
     2041 atttgctgct gtatcacacg tcgctggggc tgatggtgcg ggccggcatc gaggaccggc
     2101 ggatggtcag cctgctgggt atcgacgtgc gcaagatgtt tctgctggtg tttgtgatcg
     2161 gcgcggtggc ggcgggcgtt gccggtgtca tctttgcgcc gctatcggca gtgatccccg
     2221 acatgggcac gccgtttctg atccaggctt tcgtcgtggt ggtgatcggt gggcttggat
     2281 cgtttggcgg cgctattgtt ggcggcctgg ttgtcggtga gttgctgagt ctgacgacgg
     2341 cgttcgaccc ggcctatgcc caggcatcga tctacctggt catgaccctg gtgctggtgc
     2401 tgcgaccgcg cggcctgttc ggcgcggtgg gccggatatg agcacgcgcg cgatgtcccg
     2461 ccggggtggg cgctgggtcc ccgagatcat cgtcgccgcc ctgctgatca gtttgccgtt
     2521 cggttgtgcc gcggcattct cctcggtcga tctgctgagc cgcatcctgc tgtggggtct
     2581 gttcggcatc ggattcgacc tactgttcgg ctacagcggg ctgctgtcat tcggtcaggc
     2641 ggcgttctac ggcaccggcg gcttcgtgac cgcgtatctg ctgaccactc acacgctgag
     2701 cagtgtgtgg ctggcgatgc tggccggggt gttggcggcg tcggtgttca gcctgctggt
     2761 cgggtatctg gcgctgcggc gtgtcgggct gtactttgcg atgatcacgc tcgccttcgc
     2821 gcaattgtcg ttctttgtgg aaaattcccc gttggcgcct tggaccggcg gcgagaacgg
     2881 gcttcctggc atcccgccgc cgacgatcca tatcggatcg ctggtttact ctttcgctgg
     2941 cgagtggcgg atttatgagc tgatcgcgac gctgttcttc ctcgggtatg tgctggcgcg
     3001 gtttatcgtg cgctcgccgg ccggggcggt gctggccggc attcgccaga acgctgatcg
     3061 gacagccgcg ctgggtcatt cggttcccgg ctacaagctg tcggtgttcg tgctggccgc
     3121 ggcctatgcc ggactcgccg gcgcgttgct gggcattttt caaagctata tgccgccagg
     3181 ggcgttttcg atcgacacgt cggggcagtt ggtgttccag accgtgatcg gcggtgtggg
     3241 gacgttgctg ggtccggcga tcggcgccgc ggtgtggctg ttcctgcgcg ccgagctgca
     3301 gcagattccg gggatcgggt cgctgtggat gttcatcctg ggcgcgatat tcgtgctgtt
     3361 ggtgacgctg ctgcgcaaag gactgtacgg ttcggttgtc gcctggtggc aatcgcgccg
     3421 ggcggtggcg gtggcgccgg cttttgtgcg gccgcgtccg agtgcggtgc cggcgacgcc
     3481 gcgggtggtc gccgacgcct cggtgccgtc tgtgctcgag gcttgtgcgg tcagcaagca
     3541 tttcggcggt atccgggcgg tgtcagacgt atcgctttct gtgccggcgg gggaaatcta
     3601 cgcggtgatc ggtcccaatg gcgccggcaa gaccacgttc ctgcgtatgc tgtcggggga
     3661 aatggtgccg agtgcggggc gcatcctgct gcgcgggcag gacatcaccg ggcgcagcgt
     3721 caccgcggtc aatcaggcgg ggatcgccaa aagctaccag gtcaatcagt tgttcaacga
     3781 cctgaccggg cggcagaacc tgcgcatcgc ggcactggcg cggcaccggg gtccgttgcg
     3841 gttcgacgta ttccgagcgg cggagagtat tccggcggtt gagcagtcga tcgcggggct
     3901 gatcgaggaa ctcgggttgg cggcgagtgc cgacctgccg gtggcgacgc tggcgtacgg
     3961 ggaaaagcgg cgcatcgaac tggggctggc gctggcgacg cagccttctg tgctgctact
     4021 ggacgagccg ctggccggtc tctcgccggg ggagcggcag gatgtgatcc ggctgatccg
     4081 gcgcctcgcc gaggggcgca ccatcgtgct ggtcgagcac gacatggacg cggtgttcgc
     4141 gctggccgct cggatcatgg tgatgcatga gggccggccg ctcgccgagg gcacgccgtc
     4201 ggaaattcgt tgcgacgcgc aagtgcgccg cgcctatctg ggggggatgg ccgcgcatgt
     4261 ccatgcttga ggttgacgca atcaacagct tctacggcga ttcgcacgtg ctgttcgata
     4321 tcagcctgcg cgtggaggag cacgaggtgg tggcgttgct ggggcgcaac ggtgccggca
     4381 agaccacgac gctgaacacg atcgccggga tcatcgcgcc tcgatctggg tcgatccggt
     4441 ttggcgggac gccgatcgag gggctggcga gccatgtgat cgcgcgccgg ggcttgcagc
     4501 ttgtgccgga ggagcggcgg atcttcatta cgctgacagt ggaggagaat ctgcaactgg
     4561 cggcgctgaa cgcgcccgaa gcgaagtcga tggacgagat tttctcgatc ttcccgcgac
     4621 tgcgcgaacg gcggaaggcg actggcggca cactgtcggg gggtgagcag cagatgctgg
     4681 ccattgcgcg ggcgctgatc cggtcgcctc ggctgatcct gctggatgag ccgttcgagg
     4741 ggttggcgcc ggtgattgtc gaggatcttg tgacgctgtg cggggggctc gccgaggctg
     4801 ggacgacgat cgttatcgtg gagcaggatg tgcggtcggc gctggagctg gcgcggcggg
     4861 tgtatgtgct gaacaacggt catgtcgtgt tcgagggcac gcgggacgcg ctgctggccg
     4921 atccggagat taccagccgg tatctgggta tggggttgga gatcgcggag tcgttggagc
     4981 cgtagggtgg gtgggcggcg gagcggcaaa tctgcaacgg acccggcatt gggccgaatg
     5041 tccgatcctg gcacttgctt gcctgcaagt ggaccggccg aaagtaacgc attgcggcgc
     5101 tagggtgact gcctgcgcca ccgttggaat cgagcccggc ctgctcagcg ccaagtcgtc
//
LOCUS       DATAVD010000401         2477 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_224246, whole genome shotgun sequence.
ACCESSION   DATAVD010000401 DATAVD010000000
VERSION     DATAVD010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224246"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..536
                     /locus_tag="VHX39_07475"
     CDS             <1..536
                     /locus_tag="VHX39_07475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX3990997.1"
                     /translation="AMAYNNAWANHRLLHACADLSQAEFVAPRIGFFPDLRATLNHIL
                     IVDQFYVDAMEGGTLGPAAWENPVPCETVALLQDAQAAVDHRLIAVVNGLDDAGLQRI
                     VDVHRGTRIQHERMDRLLMHLFQHQIHHRGQAHCLLSGTSIPPPQLDEFFSIGEAPLR
                     AAEFAELGWTEDTIWQN"
     gene            complement(694..1359)
                     /locus_tag="VHX39_07480"
     CDS             complement(694..1359)
                     /locus_tag="VHX39_07480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEX3990998.1"
                     /translation="MFAVVFEVQPRSDRWETYLGLAGALRPELVAIDGFIDNVRYGSL
                     RREGWLLSLSTWRDEKALVRWRTNAPHHAAQEQGRGGVFRDYHLRVGQVTADSRPPQG
                     YAVHERRFDETEDGVAKLLTIVELRRPPGLPEDATPEQVGRSLGLQESAHGLVAWDVF
                     DAILTPGDLLLLLAWRDTAAAELGERGLPVDARQRTVRVVRDYGMFRRNEAPQYYPEV
                     APH"
     gene            complement(1480..>2477)
                     /locus_tag="VHX39_07485"
     CDS             complement(1480..>2477)
                     /locus_tag="VHX39_07485"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX3990999.1"
                     /translation="PQNVICELLKTFSGVVRGMDPLGHTEIWSRLFSLTSPRPGGLGG
                     WDGLPPPLPRNQRPQIMAAIGGIDIALWDIKGKALGLPVFRLLGGTRTEVFTYSTGGY
                     YVEGEPLGSAAKELGGFAADGYRAVKLKTGALSLQDEVTRIRLVREAIGPEVLFMLDM
                     NAPYDVADCIAFAKAVAPYDIFWLEEPLHWYLQPADFTRLAAESPIPLAHGEREWHRF
                     TVRDFIDSGAIRFVQFDSTRHAGFTESLRIAHYAEQKRVTIAPHSVAHLHSHLVSAFG
                     DAAFAAESHGNPARHPLHHEIFEGGAHAKNGMVRLSEAPGFGLEINWQAVARFRT"
BASE COUNT          517 a          812 c          720 g          428 t
ORIGIN      
        1 gagcaatggc gtacaacaac gcatgggcca atcatcggct gctgcacgcc tgcgccgacc
       61 tctcgcaagc cgaattcgtc gcaccccgca ttgggttttt cccggacctg cgagccacgc
      121 tcaatcacat tctgatcgtc gaccagttct atgtcgacgc gatggaaggc ggtacgctcg
      181 ggcccgccgc gtgggagaac ccggtgccgt gcgaaacggt tgcattgctg caggatgcgc
      241 aggccgcggt tgatcaccgc ctgatcgcgg tcgtgaacgg cctggacgac gcgggtctcc
      301 agcgtatcgt cgacgtgcac cgaggcacac ggatccagca tgagcgaatg gatcgtctgc
      361 tgatgcattt gtttcaacac cagatccatc atcgcggcca ggcgcattgc ctgttgagcg
      421 gcacatcaat cccgccgccg caacttgacg aattcttctc cattggcgag gcaccgttgc
      481 gtgcggccga atttgccgag cttggctgga ccgaagatac catctggcag aactgaagcg
      541 tgattggctc aggttggtgt gccgtttcgt cgtcatggcc cgactcgttc gggccatcgg
      601 aaccggcaca gtgcaaggtc aggtggcccg gacgagccgg gccatgacgg gaagatacgt
      661 caaccccaag caatcatact caaagcccac aactcagtgc ggcgccacct ccggataata
      721 ttgcggtgcc tcgttgcgcc ggaacatacc gtagtcgcgc accacgcgga ccgtgcgttg
      781 acgtgcgtca accggcagac cgcgttcgcc gagttcagcc gccgccgtat cgcgccaggc
      841 gagcagcaga agcaaatcgc ccggcgtcag aatggcatcg aacacgtccc acgcgaccag
      901 cccatgagca ctttcctgca agcccagtga acggccgacc tgctcgggag tggcgtcttc
      961 gggcaacccg ggaggccgcc gcaactcaac gatggtgagc aacttcgcaa cgccatcctc
     1021 cgtctcgtcg aaccgccgct cgtgcaccgc gtagccctgg ggcggacggg aatccgcggt
     1081 cacctgcccc accctcaaat gataatccct aaacacccca ccccgcccct gctcctgggc
     1141 tgcatgatgc ggcgcattgg tgcgccaccg cacgagagcc ttctcgtcac gccaggtgga
     1201 cagcgacagc agccagccct cgcgccgcag cgagccgtaa cgaacattgt cgataaatcc
     1261 atcgatcgcg accagttcgg ggcgcagcgc tccggcgagg ccaagatatg tctcccaacg
     1321 gtcggaccgc ggctggacct caaagacgac ggcgaacatt ggcgggctcc ttgattctgc
     1381 ggtcatgctg ctgcgggcgg cgcaacgaga tggtcatcat cactttgtcg catccaacat
     1441 cgctctcccc aacgccggcc actgctcaat cgtgaaatgt caggtgcgga atctggcaac
     1501 cgcctgccag ttgatctcaa gtccgaaacc cggtgcttcg gacaaacgaa ccatgccgtt
     1561 ttttgcgtga gccccgccct cgaatatttc atggtgcaac ggatggcgag ccgggttgcc
     1621 gtgtgactct gcagcgaacg cagcatcacc aaacgccgat accagatggc tgtgcaaatg
     1681 tgccactgaa tgcggtgcaa tggtcacccg tttctgttcg gcataatgcg cgatgcgcaa
     1741 cgattcggtg aacccggcat gccgcgtgga atcgaactgg acaaaacgga tcgcacctga
     1801 atcaatgaaa tcgcggaccg tgaaccggtg ccattctctc tcaccatgcg ccaggggaat
     1861 cggagactca gcggccaacc gggtgaaatc ggctggctgc agataccagt gcagcggttc
     1921 ctccagccaa aagatgtcgt acggcgcgac agctttggcg aacgcgatgc aatcggcaac
     1981 gtcataggga gcgttcatat ccagcatgaa cagcacctcg ggaccgatcg cctcgcgcac
     2041 caggcggatg cgggtcacct catcctgcaa agacaatgca ccggtcttca actttaccgc
     2101 ccggtagccg tcagccgcga agccgccaag ttctttcgca gccgaaccga gcggctcgcc
     2161 ttcgacgtag taaccgccgg tggaataagt gaacacctcg gtccgggtgc cgccgagcag
     2221 ccgaaacacc ggcaacccga gcgccttccc cttgatatcc cacagcgcga tatcgatgcc
     2281 gccaatggca gccatgatct gcggacgttg attgcgcggc agcgggggcg gcagcccatc
     2341 ccagccacca agcccgcccg gccgcggcga ggtcagagaa aacaaccggc tccagatctc
     2401 ggtgtggcca aggggatcca tgccgcgcac gacgccggag aatgtcttca aaagctcaca
     2461 gatgacgttc tgcggcc
//
LOCUS       DATAVD010000402         2525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1339835, whole genome shotgun sequence.
ACCESSION   DATAVD010000402 DATAVD010000000
VERSION     DATAVD010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2525
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1339835"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..725)
                     /locus_tag="VHX39_07490"
     CDS             complement(<1..725)
                     /locus_tag="VHX39_07490"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03860.1"
                     /note="This protein belongs to a clade of FMN-dependent
                     monooxygenases, within a broader family of
                     flavin-dependent oxidoreductases, the luciferase-like
                     monooxygenase (LMM) family, some of whose members use
                     coenzyme F420 rather than FMN; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NtaA/DmoA family FMN-dependent monooxygenase"
                     /protein_id="HEX3991000.1"
                     /translation="MTRQLHLNLFIHGRGHHEAAWRHPSASPLALSDIRYYIDLAQQA
                     EAGCFDSVFLADTLAAGEDIANAPRIWLEPLTALAALAGATQRIGLIATCSTTYTEPF
                     NLARQFASLDHITGGRVGWNIVTTWLVAASGNYGGQGQLSHAERYERAEEYLRVVTAL
                     WDSWTDDAVIDDRAGGVYARPGTIRPINHHGTYYQVTGPLNVPRGPQGRPVFVQAGSS
                     ETGRRFAARHAEAVFTAQMEKATA"
     gene            1025..1357
                     /locus_tag="VHX39_07495"
     CDS             1025..1357
                     /locus_tag="VHX39_07495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter"
                     /protein_id="HEX3991001.1"
                     /translation="MKLYWTALALAITTSMAGQTLLKAGASAPTFITQLFDLRTVTGL
                     GLYGGSALLYIVALRRIPMSVALPSTAVSYIVAALIGHYGFAEPMSIAKVAGIAMICV
                     GVLMLTVV"
     gene            complement(1383..2264)
                     /locus_tag="VHX39_07500"
     CDS             complement(1383..2264)
                     /locus_tag="VHX39_07500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX3991002.1"
                     /translation="MARIVQHTDPPLVGPLTPYAMCEAAIASAEATTKLPARVLNAIA
                     LRESGRLDPDTGRWRAWPWTINVGGIGHFYDTKEAAIAAVQSIQASGEASVDVGCMQV
                     NLMHHPYAFASLDDAFDPGHNAAYAGRFLMELFASSGDWGTAIASYHSRTPGVGEPYR
                     DQVVATWNPTDPTVLAKLSFQPLPPLAASMSGPGVIYAPFAQQGPIQISPNLAYRAFL
                     PSAAVYRSFRPTSVVYGDFAQHIMKQPRGRPLDFRVNMGLLNSGRALVVPTGVVVPGH
                     EKFIQMRSPPKRHGQAG"
BASE COUNT          484 a          824 c          765 g          452 t
ORIGIN      
        1 gcggtcgcct tttccatctg cgcggtgaac accgcctcgg catgccgggc agcaaagcgg
       61 cgcccggtct cggacgagcc tgcctgcaca aacaccggcc gtccttgcgg cccacgcggc
      121 acattcagcg gcccggtcac ctggtaatat gtgccgtgat ggttgatcgg ccggatcgtt
      181 ccgggccgcg cataaacgcc gccggcacga tcgtcgatca ccgcgtcatc ggtccagctg
      241 tcccacaacg cggtgaccac ccgcaaatac tcttccgccc gttcataccg ttccgcgtgg
      301 ctcaactggc cctgtccgcc gtaattgcca gaggcagcaa ccagccaggt cgtgacgata
      361 ttccagccaa cccgtccgcc ggtgatatgg tccagcgagg caaactgccg cgccagattg
      421 aacggctcgg tatacgtggt ggaacaggtg gcgatcagcc cgatccgctg tgtcgctccg
      481 gccagagccg ccaacgcggt cagcggttcc agccagatgc gcggtgcgtt cgcaatgtcc
      541 tcgcccgccg ccagcgtatc cgccaggaac accgagtcga aacaccccgc ctcagcctgc
      601 tgcgcgaggt cgatgtagta acgaatatcg ctcaacgcca gcggcgaggc cgaggggtgc
      661 cgccacgccg cctcgtgatg gccgcggccg tgaatgaaca gattgaggtg caattgccgt
      721 gtcatactgc gtcacccaca cgtgtgatcg gttgggtctt atcggtcatc ccccgatctt
      781 accggctgcg atgtgccttt gaccatacag catggcaaac gggcctcccg cgtctctgcc
      841 catcggccag aactcatgcg tatcgcacat cccgctggtc gccagaggca accaccttcg
      901 ccgattgtga aaccgcagga attgcgtcag acacacgcat tggccggtta ccatcgccgt
      961 tctcgcaacc acccaacgtc acggccacgc ggcacaatgc gaaccgagcg gcaacggagc
     1021 cggaatgaaa ctgtattgga ccgctctggc gttggcgatc accaccagca tggccggcca
     1081 gaccttgctc aaagccggcg ccagtgcgcc gacctttata acccagttgt tcgacctgcg
     1141 gacggtgacc ggacttggcc tgtatggcgg ctcggcgctg ctctacatcg ttgcactgcg
     1201 gcgcattccg atgtcggtcg ccttgccgag caccgctgtc tcctacatcg tggccgcgct
     1261 gatcgggcat tacggcttcg ccgagccaat gagcatcgca aaagtggccg gcatcgccat
     1321 gatttgtgtc ggcgtgctga tgctgaccgt ggtctgatcc tgctctgcga aggaccggaa
     1381 aactatcccg cctggccgtg ccgctttggt ggcgacctca tctggatgaa cttctcgtgg
     1441 cccggcacca cgactccagt ggggaccacc aacgcccgcc cggagttcag cagccccatg
     1501 ttgacgcgga aatccagcgg acgtccgcgc ggttgtttca tgatgtgctg agcaaaatca
     1561 ccgtaaacga ccgaggtcgg acggaacgac cgataaaccg cagcacttgg caggaacgca
     1621 cggtaggcca aattcggcga gatctggatc ggcccttgct gcgcaaaggg cgcatagatc
     1681 actcctgggc cggacatcga ggcggcaaga ggcggcagcg gctggaagct gagctttgcc
     1741 aggacggtcg gatcggtcgg gttccaggtg gcaacgacct gatcgcgata cggctcacca
     1801 acgcctggcg tgcgagagtg atacgacgca atcgccgtgc cccaatcacc cgacgaggcg
     1861 aacaattcca tcagaaaacg cccggcgtag gccgcgttgt ggcccgggtc gaacgcgtca
     1921 tccaggctgg caaacgcgta cgggtgatgc atcaggttga cctgcatgca accgacgtcg
     1981 accgatgcct cgccggacgc ctggatgctt tgcaccgccg caatcgccgc ttccttggtg
     2041 tcatagaagt ggccgattcc cccgacattg atcgtccagg gccaggcccg ccagcgcccg
     2101 gtatccgggt cgagccgacc cgactcgcga agcgcgatgg cgttcaacac gcgggcgggg
     2161 agcttcgtcg tggcctcggc actggcgatc gccgcctcac acatggcgta cggcgtgagc
     2221 ggcccaacca gcggcgggtc ggtgtgctga acgattcggg ccatggcgag gcctggcagc
     2281 agagccaggc agagggcgag gcaacggatc atggtaggcg tttgtgcacg aaatcagcag
     2341 gatggaaagc gttttttcac ctcggccaca ttacatttgc cgcccggaca tcagtcgagc
     2401 agccacaaag caaacaaatc gttggaatcg gaccattttt tcgtcacgga ccaacccgcc
     2461 gcggccacca cctcctgcat acggggaggt gcgtatttgt agctgttttc ggtatggatt
     2521 gtctc
//
LOCUS       DATAVD010000403         2955 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_968311, whole genome shotgun sequence.
ACCESSION   DATAVD010000403 DATAVD010000000
VERSION     DATAVD010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2955
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_968311"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..625)
                     /locus_tag="VHX39_07505"
     CDS             complement(53..625)
                     /locus_tag="VHX39_07505"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX3991003.1"
                     /translation="MTERVTMVSLDRAQQLGEEWGTPGPRTTRSAFRMLANNPPLAKA
                     TFALLSQLLEHNTFDARLRELMIMRIGWVTGSAYEWTQHWRVATSVGVPPEDVLAVRD
                     WRASDRLTAADKAVLAAVDESLAGKAISDVTWAEVTKYIAEPGQQVEFIVAMGNWTMF
                     SMLLRNLKIPVEDGVAVWPPDGVPSPAAEA"
     gene            986..>2955
                     /locus_tag="VHX39_07510"
     CDS             986..>2955
                     /locus_tag="VHX39_07510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
                     /protein_id="HEX3991004.1"
                     /translation="MSGPIRVWGAPEGWDAFLLAQRRREYSGPVLHVTRDDARMARLA
                     EALAFAMPEAEILRFPAWDCLPYDRVSPNPALVSERIATLTRLLDKPAGPRIVLTTVN
                     ALVQRVPPRSAFAGARLDVTVNGQVKPEELARFLEANGYGRAGTVMEPGEYAVRGGIF
                     DIFPAGESEPLRLDMFGDTIESIKPFDPSTQRSGGKGRRALSLRPVSELALDKESISR
                     FRTGWRDTFGPEAAQDPLYLSISEGRRHPGMEHWVPLFHPVMENLLDYLPDASVSLDH
                     QSNEVLESRLEMIADHAQARQAPPRDGEVPYRALPPARLYLDRDEWDEMLSFGPLLAF
                     TPFGRPDGVSEVDGGGRPGPVFAQSAGGPGISVFEQLRSQAERWRIEGRRIIIAAWTR
                     GSRERLTLLLKEHGFKDVAQEDDWAAVRRKEAGSVSLITLGVERGFVAERLALVGEQD
                     LLGERISRPPRRRMRADQFIAEATEISEGDLVVHQEYGIGRYDGLTTLTVTGAPHDCL
                     RLIYDGDEKLFLPVENIEVLSRYGSDQQGATLDKLGGVAWQSRKAKMKQRIRDMAGEL
                     IKIAAARQLHDAEIMAPPEGSFDEFCARFPFAETEDQSRAIADVLEDLASGRPMDRLI
                     CGDVGFGKTEVALRAAFIAAMSGAQVAVVVPTT"
BASE COUNT          502 a          913 c          988 g          552 t
ORIGIN      
        1 gaacgggtat tccatgatgc cgataccgag agcgatggta cgtgccattg tcttatgcct
       61 ccgcggcggg tgaaggaacg ccgtcgggcg gccagaccgc gacgccatcc tccaccggga
      121 ttttcaggtt gcgtagcagc atcgaaaaca tcgtccaatt gcccatggca acgatgaact
      181 ccacttgctg gcctggctcg gcgatgtatt tggtcacttc agcccaggtg acatcggaaa
      241 tggctttgcc ggcgagagat tcgtcaacgg cagccagcac cgctttgtcc gccgcggtca
      301 accggtccga tgcacgccag tcgcgcacgg ccaacacatc ctccggcgga acgcccacgc
      361 tggtcgcgac gcgccagtgc tgcgtccact catacgccga gccggtgacc caaccgatgc
      421 gcatgatcat caactcgcgt agccgcgcat cgaacgtgtt gtgttccaac agttgcgaca
      481 acagagcgaa cgttgccttg gccaatggcg gattgttcgc cagcatgcgg aacgccgagc
      541 gggtggtgcg cggcccgggg gtgccccact cctcgccgag ttgctgcgcg cggtcgagag
      601 ataccatcgt cacgcgttcg gtcatcgccg gccctccagt cgttcggctg atcgtccccc
      661 gccgcgcggc tggccgcaat ccccggcatg gggacgggtc agggcttcgc ccttggacct
      721 accaagggag cgctgctccc ctggacccct cggctaaggg cgaggccctt agcaatctat
      781 ccattgggtg ggtgggggag gagggcttac agtgccatat caacgttcgt gtaagccctc
      841 ctcccccacc cacccaaatt aatggttcca agggccactg cccttggcgg agttccaaga
      901 ggcagagcct cttggtcggg gtccggggcg aggccccggc actttctcag ctccaggcca
      961 cccccccaac gcccgagccc gcgcgatgag cggccccatc cgcgtttggg gtgcgcctga
     1021 ggggtgggac gcgtttctgc ttgcgcagcg cagacgagag tattcggggc cagttctgca
     1081 tgtgacccgg gacgacgccc gaatggcccg gctggctgag gcgctggcct tcgcgatgcc
     1141 cgaagcggag attttgcgtt tccccgcctg ggactgtttg ccctacgatc gtgtgtcgcc
     1201 caatccagcg ctggtgtcgg agcggattgc cacactgacc cggctgctcg acaagcccgc
     1261 cgggccacgg attgtgctga caacggtgaa tgcgttggta caacgggtgc cgccgcgctc
     1321 tgccttcgcc ggagcccgat tggatgtaac ggtcaacggc caggtgaagc cggaggaact
     1381 ggcacggttc ctggaggcca acggctatgg ccgggccggc accgtcatgg agccgggcga
     1441 atacgccgtc cgcggcggca tctttgacat attcccggcc ggcgagagcg aaccgctccg
     1501 gcttgacatg tttggcgaca cgatcgaatc gatcaagcca ttcgacccgt cgacgcaacg
     1561 gagtggcggt aagggccgcc gcgcgttgtc gttacgaccg gtatccgaac tggcgctgga
     1621 caaggagtcg atttcccggt tccgcaccgg ctggcgcgac actttcgggc cagaggcggc
     1681 gcaggatccg ctgtatttgt cgatctccga ggggcggcgg catcccggca tggagcactg
     1741 ggtgcctttg ttccatccgg taatggaaaa tctgctggat tatctgccgg acgcttccgt
     1801 cagtctcgat catcagtcca atgaggtgct ggaatcgcgc ctcgaaatga tcgccgatca
     1861 tgctcaggcg agacaagcgc ccccgcgtga tggcgaggtg ccgtaccggg cgttgccgcc
     1921 tgcgcgtttg tatctcgacc gtgatgaatg ggatgagatg ctgtcgttcg gcccattgct
     1981 ggcctttacc ccattcggcc gtccggacgg cgtctctgag gtcgatggcg gcggacgccc
     2041 agggccggtg ttcgcgcagt cggcgggtgg gccggggatc agcgtgttcg agcaattgcg
     2101 ttcgcaggcg gaacgttggc gcatcgaggg acggcgcatc atcatcgccg cctggactcg
     2161 cggctcacgc gagcggctga ctttgctgct gaaggaacac gggttcaagg acgttgcgca
     2221 ggaggacgac tgggcagcgg ttcggcggaa ggaagccggg tcggtatcgc tgatcacgct
     2281 tggtgtcgag cgcggcttcg tcgccgaacg tcttgcattg gtcggcgaac aggatttgtt
     2341 gggggagcgg atttctcgcc cgccgcggcg ccgtatgcgc gcggatcagt tcatcgccga
     2401 ggcgacggaa atctccgaag gcgatctggt cgtgcaccag gaatacggca ttggccgtta
     2461 cgatgggttg acgacactga cggtcaccgg cgcgccgcat gattgtttgc gcctgatcta
     2521 cgacggcgac gaaaaacttt tcctgccggt ggaaaatata gaggtgctgt ctcgctacgg
     2581 cagcgaccag caaggcgcca cgctggacaa actgggcggc gttgcatggc agagccgcaa
     2641 ggcgaagatg aagcagcgca tccgcgacat ggcgggcgag ttgatcaaga tcgccgccgc
     2701 gcggcagttg cacgacgccg aaatcatggc accgccggag ggcagctttg acgaattctg
     2761 tgcccgcttc ccgttcgccg agaccgagga tcagtcgcgc gccatcgccg acgtgttgga
     2821 ggacctcgcc tctggccggc cgatggaccg gctgatctgt ggcgatgttg gcttcggcaa
     2881 gaccgaggtt gcgttgcgcg ccgctttcat tgccgccatg tcgggcgcgc aagtcgcggt
     2941 ggtggtcccg acgac
//
LOCUS       DATAVD010000404         1693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1899753, whole genome shotgun sequence.
ACCESSION   DATAVD010000404 DATAVD010000000
VERSION     DATAVD010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1899753"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1693
                     /locus_tag="VHX39_07515"
     CDS             <1..>1693
                     /locus_tag="VHX39_07515"
                     /inference="COORDINATES: protein motif:HMM:NF014850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /protein_id="HEX3991005.1"
                     /translation="SAAMESTSVDGAAVTARRLDAGWEFRKGPIDGIWGAWRTEDNDL
                     WQPAALPHCFNAMDACDPDQPYFRGEGWYRTRLEVSNPFAEGRTILHLQGAGQTTALW
                     VGSRLIGTHKGGYDEFVFDITEALRGLTAAETKGGVPIAVLCDNSPDLDRVPSDLSDF
                     CLYGGLYRHVNLAYLPALALDAVHILPTVSEDGAAQVSVKTRLFNPTNRKLPCTVSVE
                     VWDAGGRSVHRATQTIPVWDGTSEVTAFRIATPMLWSPETPHLYRCQVTLTTAAGKTS
                     LDERFGVRKTEFVENGPFKLNGKRVLLRGTQRHADHAGVAAAMPDDLVRQEMQLIRDM
                     GANFIRLAHYQQDRLILDLCDELGLMVWEEVPWCRAGIGSKAFQQNAKDMLTHMIDQH
                     YNHPSIILWGLGNEDDWPDEYPNVDQQAIRGFMTELRDLAHARDNSRLTSFRRCDFAR
                     DIPDVYSPSIWAGWYSGNYREYEQSLVTQRARVERFIHIEWGADSQAGRHSEDPEAAL
                     RKVATGKGTAEVGLAYLKTGGEARVSRDGDWSETYACNLFDWHLKTQEKLEWLTGS"
BASE COUNT          320 a          522 c          559 g          292 t
ORIGIN      
        1 gtcggccgcg atggagtcga cgtcggtcga tggagcggcg gtgaccgcgc ggcgcctgga
       61 tgccgggtgg gagttccgca aaggtccgat cgacggaatc tggggagcct ggcggacgga
      121 agacaacgac ctttggcaac cagcagccct tccccattgc ttcaacgcga tggacgcctg
      181 cgatcccgac cagccctact tccgcggcga gggctggtac cggacgcgcc tcgaggtcag
      241 caaccccttc gccgaagggc gaaccattct gcaccttcag ggcgcgggtc agaccaccgc
      301 gctgtgggtt ggttccaggc tgattggaac gcataagggc gggtatgacg aattcgtgtt
      361 cgacatcacc gaagcccttc gcgggttgac ggctgccgag accaagggcg gggtgccgat
      421 tgccgtcctg tgcgataact cgcccgacct ggaccgtgtg ccctccgacc tgagcgactt
      481 ctgcctgtat ggcgggctct accgccatgt gaacctggcg tatctgccgg cgctcgcgct
      541 ggacgcggtc catattctgc ccactgtttc tgaggacgga gctgcccagg tctcggtcaa
      601 gaccaggctc ttcaatccca ccaaccgcaa gctgccctgc acggtttcgg ttgaggtctg
      661 ggatgccggc ggacgatcgg tccatcgcgc gacgcaaacc atcccggttt gggacggcac
      721 cagcgaagtc acggcgttcc gcattgccac cccgatgctc tggtcgccgg agactccgca
      781 tctctatcgc tgccaggtga cgctgacgac cgccgcaggc aagaccagcc tcgatgagcg
      841 gttcggcgtc cgtaaaacgg agtttgtgga gaacggcccc ttcaagctga atggcaagcg
      901 cgtattgctg cgcggcaccc agcgacatgc ggaccacgcg ggcgtggcgg cagcgatgcc
      961 cgacgatctg gtgcggcagg aaatgcaact gatccgcgat atgggcgcca actttatccg
     1021 gctggcgcac taccagcagg atcgcctgat cctggacttg tgcgacgaac tcggcctgat
     1081 ggtgtgggaa gaggtgccgt ggtgccgcgc cggcatcggc agcaaagctt tccagcagaa
     1141 tgcaaaggac atgctgaccc acatgatcga ccagcactac aatcacccgt cgatcattct
     1201 gtggggcctg ggcaacgagg acgactggcc ggacgaatat ccgaacgtcg atcagcaggc
     1261 gattcggggc tttatgaccg agctgcgcga cctggcccac gcgcgtgaca actcacggct
     1321 gacgtcgttc cgccggtgcg acttcgcgcg cgacatcccg gacgtctatt cgccatcgat
     1381 ctgggcgggc tggtatagcg ggaactatcg agaatacgag cagagtctgg tgacgcagcg
     1441 cgcccgcgtc gagcgcttca tccatattga atggggagcg gacagccagg ccggccgcca
     1501 ctccgaagat cccgaggcgg ctctgcgcaa ggtggctacg ggcaagggga cagcagaggt
     1561 gggattggct tacctgaaga ccggcggcga agcgcgcgtt tccagggacg gtgactggtc
     1621 ggagacctac gcctgcaacc tgttcgactg gcacctgaag acacaggaaa agctggagtg
     1681 gctgaccgga tcg
//
LOCUS       DATAVD010000405         7986 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3014917, whole genome shotgun sequence.
ACCESSION   DATAVD010000405 DATAVD010000000
VERSION     DATAVD010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7986
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3014917"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..318
                     /locus_tag="VHX39_07520"
     CDS             <1..318
                     /locus_tag="VHX39_07520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX3991006.1"
                     /translation="AWAAGCSRPWIILREILPNIAHHLVVIATIEMAIAILLEAALSF
                     LGLGVPPPLPSWGLMIAEAKDYMFFKPWVIEIPGLALLILVLGINLLGDGLRDALGAR
                     SER"
     gene            315..1289
                     /locus_tag="VHX39_07525"
     CDS             315..1289
                     /locus_tag="VHX39_07525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3991007.1"
                     /translation="MTPVLDIADLDVRFPSLHAVRGISLSVAAGETHCLVGESGSGKS
                     LSALAMMGLLPRGARRAATHIRFEDTDIARLSERQMARLRGDRMAMIFQEPMTSLNPA
                     YTVGSQMTEVLRRHRGLRQDAAVERSAAMLTRVGISAASMRLGQFPHQLSGGLRQRVM
                     IAMALLCEPKLLIADEPTTALDVTVQAQILRLLAELQRDLGLAVLLITHDLGVVARVA
                     HRVSVMYAGEIVEQAPVTELFARPTHPYTRGLLASIPIPGKVRRGERLGSIRGTVPHI
                     APGFVGCAFRDRCDYALPSCAVAAPVRDAAADHMYRCRLDPSWRAAAA"
     gene            1286..2224
                     /locus_tag="VHX39_07530"
     CDS             1286..2224
                     /locus_tag="VHX39_07530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX3991008.1"
                     /translation="MTAAIEIIGLSRTFEQSGGTMAAPRHVVAVDDVSLSLRAGEALA
                     IVGESGCGKSTLARILLGLLPPSSGSVRIDGRLLATIDRRERARLIQPVFQDPMSSLN
                     PRRRVRDIVALPLIAAGDVGRTERQERVAAILKQVGLGPDIAERFPGQLSGGQRQRVA
                     IARALVLRPRILICDEPTSALDVSVQAQILNLLADLRSAFELTLVFISHNLAVVEHVA
                     DAVAVMYLGRIVEHDVADAVFRSPRHPYTKALLASVLTPDPGLGLPDVSLGDDYPDPA
                     HIPSGCRFHTRCPVAIPRCRTEPPARKAVECHLVPA"
     gene            2256..3770
                     /locus_tag="VHX39_07535"
     CDS             2256..3770
                     /locus_tag="VHX39_07535"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3991009.1"
                     /translation="MKRRTFLGTAAAGAVVGSAAQAQKSDDTLRVTWRDAVPDVDPYR
                     NSLRTGIIVSHEAWDMLVYRDPNTFKIVPALATSWTFSDPTTLDFTLRPGVKFHNGDP
                     FSADDVVYTFNTIISDPKTSVPSNFAFIAGAEKLGDLKVRIKLKTVFPAALEYFAMAL
                     PIYPKAYREKVGGAEYSQKPIGTGPYRITRVNGSSEIDMERFEDYYKDSPKGRAAIKY
                     LKINQVLDAAGELTAFISGQADWIWQYNPDQFDNLKMLPGKTAIRAGSMRIGYLQLDA
                     AGRTGAGNPLTKQKVRQAICHAIDRHAIAHDLVQGDSHPIDAPCYPTQFGCDAKAAID
                     YDYDPKLAKQLLTEAGYPNGFSTSLVTYLLSSFSAAVQNYLKVIGITADIQQLQVGAE
                     IQKVMAGQTPMNFGTWGSYSINDVSAILPYFFGGGANDYARDPQVTADVKQGGLVIDP
                     EGRIKHYSAAIKRITEQAYWLPMFTSVTQYAFAKNLKFTPFPDELPRFYLCAWV"
     gene            3865..4182
                     /locus_tag="VHX39_07540"
     CDS             3865..4182
                     /locus_tag="VHX39_07540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdhR family protein"
                     /protein_id="HEX3991010.1"
                     /translation="MITAIVLYDLPPNIDKEACRAHFHSIAPGFLDVPGLVRKQFIHA
                     TEGGVAGGCYLWESQAAAETFYSGPWREGIILRYGAPPRITYFDTLAIADVPARQAVA
                     FHD"
     gene            4273..5574
                     /locus_tag="VHX39_07545"
     CDS             4273..5574
                     /locus_tag="VHX39_07545"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03860.1"
                     /note="This protein belongs to a clade of FMN-dependent
                     monooxygenases, within a broader family of
                     flavin-dependent oxidoreductases, the luciferase-like
                     monooxygenase (LMM) family, some of whose members use
                     coenzyme F420 rather than FMN; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NtaA/DmoA family FMN-dependent monooxygenase"
                     /protein_id="HEX3991011.1"
                     /translation="MAKQPFHLGWFVMKGYGPKGWRNLWGGPNPHGWVKPDLLVHLAK
                     ELERAAFDYVMIEDSCNVPYTYKNSHETYLRLAVDSPKLDPAVLAPFMIQATQRIGII
                     TTLSTTEYNPFLLARLTNALDHVSDGRAGWNLVTGSNDGGAQNFGHERQFPHDERYDM
                     ADEYVELVQKLWDSWDADAMVIDQENEIFADPAKVRPVFHEGKYFRSRGPLSAPRSPQ
                     GHPVICQAGGSPRGRAFAARWADTVIASAGSVAGMKAYRDDIRTQAAAFGRNPDDIKV
                     MFLIAPIIDEFMDTALARKQARLADTESHIEFALANMSRVTGIDFSKYDLDEKLPELT
                     SNGHLSVAKAYSGRTPREIAMQGRSLSDADLVGTPDRVAAQMAEIMEAVGGDGFLFMD
                     PDFTRRYITEIADGLTPALQKLGLVRKKYEHAMLRDNLRAF"
     gene            5804..7357
                     /locus_tag="VHX39_07550"
     CDS             5804..7357
                     /locus_tag="VHX39_07550"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3991012.1"
                     /translation="MTYRLTRRSGLLAGAASVLSASWLRTAVADETGTLTVALSTNPV
                     TCDPINSSSHDWEIISESIFENLVEFDIDGNLKPQLAKALPEISADALVYTFDLRDDV
                     LFHDGTPMTSEDIKYSLEYIINPANKASRGPIFNRLSHVETDGPHRVHVHLKVPFAPW
                     TAFLTKFMGVFPKGSREKYGNEYFRVSPKGVGTGPAMFEEWKPNDYISMRRNPHYWQK
                     GLPHWDRVVVKIVPEDATRVAYLLAGQADIIGAPPAREFSRLKTRKGIQGAAVPTFGG
                     WTVMFQNISKPPFDDIEFRRCIQHAVDRKTIADKIYYGLVEPSGIPAPASAWWYDKQA
                     DEMTAYNPDLAKQHLAKSRYPNGTEFEMEVSAEPYLLDAKDAAVFVQSELAKLNIKVN
                     LRVSSSQIVQSNIMGGTYQSGLANFMSPGEATYFLMASFTANSFMSKTVGNFTDPEVA
                     AALKIAFAETDREKLKPVYAKLMRYLADTSYFTWIGYFAAANLWRDRVKNFRPSRGLT
                     INVYDVSMS"
     gene            7357..>7986
                     /locus_tag="VHX39_07555"
     CDS             7357..>7986
                     /locus_tag="VHX39_07555"
                     /inference="COORDINATES: protein motif:HMM:NF040248.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3991013.1"
                     /translation="MLALLLRRVGFSLLSLVLVSSCLFVLTRAIPDSPARIVLGQDGT
                     QAQIAQFEHDHGLDRPVAVQYGLWLKGMLLHGSLGTSFITGRPVGPDIAATLPVTLEL
                     VVVAFVFSCVLSILAGTLSALLRDTVLDYGTRLVAVLGVSVPGFWLALVLIMAFAVDR
                     DWFPPGGVAPWSAGVLQHLDSIALPTFCLGIFYMAVLSRMTRSSMLEVLG"
BASE COUNT         1463 a         2418 c         2541 g         1564 t
ORIGIN      
        1 gcctgggccg caggctgctc ccgcccctgg atcatcctgc gcgagatcct gcccaacatc
       61 gcccaccacc tcgtcgtcat cgccacgatc gagatggcga tcgccatcct gctggaagcg
      121 gcgctgtctt tccttggcct cggcgtgccg ccgccgctgc cgtcctgggg cctgatgatc
      181 gccgaagcca aggactacat gtttttcaag ccgtgggtga tcgagatacc cggcctggcg
      241 ctgctgatcc tggtgctcgg tatcaacctt ctgggcgatg gcctgcgtga cgccctcggc
      301 gccaggagcg agcgttgacc ccggtactcg atatcgccga tctggatgtg cgattcccat
      361 cgctgcacgc cgtgcgcggc atcagtctga gtgtcgccgc cggggagacg cattgcctgg
      421 tgggcgagtc cggcagcggc aagtcgctgt cggccctggc gatgatgggg ctgctgccgc
      481 gtggcgcccg tcgcgccgcc acccatatcc ggttcgaaga caccgacatc gcgcgattga
      541 gcgagcggca gatggcgagg ctgcgcggcg atcgcatggc gatgatcttc caggagccga
      601 tgaccagttt gaacccggcc tacactgtcg gttcccaaat gaccgaggtc ctgcgccggc
      661 accgcggact gcggcaggac gcggcggtcg aacgatcggc ggcaatgctg acgcgggtcg
      721 gcatcagcgc ggcatcgatg cggctcgggc agttcccgca ccagctttca ggcgggctgc
      781 gccagcgggt gatgatcgcc atggcgctac tgtgcgagcc aaagctgctg atcgccgacg
      841 agccgacgac cgctctggac gtgacggtac aagcccagat cctgcggctg ctggccgagt
      901 tgcagcgtga cctcgggctg gcggtgctgc tcatcacgca tgacctgggt gtggtggcac
      961 gcgtcgcgca tcgtgtctcc gtcatgtacg cgggtgagat cgtcgaacag gcgccggtga
     1021 ccgagctgtt cgcgcggccg acgcacccgt atacgcgggg cctgctggcc tcgattccga
     1081 taccgggaaa ggtgcgtcgt ggtgagcggc tgggcagcat tcgcggcacc gtgccgcata
     1141 tcgcgccggg attcgtcggc tgtgcgttcc gagaccgttg cgattacgct ctgccgtcgt
     1201 gcgcggtggc cgcgccggtg cgcgatgcgg ccgcggacca tatgtatcgc tgtcgactcg
     1261 atccctcatg gcgggccgcc gccgcatgac ggccgccatc gaaatcatcg ggttgtcgcg
     1321 gaccttcgaa caaagcgggg gcaccatggc cgcaccccgg catgtggtgg cggtggacga
     1381 cgtctcgctt tcgcttcggg ccggtgaagc gctggcaatc gtcggtgagt ccggctgcgg
     1441 caagtcaacc ttggcgcgta ttctgctcgg gctgctgccg ccgtcgtccg gctccgtgcg
     1501 gatcgacggc cgcttactgg cgacgatcga tcggcgggag cgtgcgcggc tgatccagcc
     1561 ggtgttccag gacccgatga gttcgttgaa cccgcgccgc cgcgtacggg atatcgttgc
     1621 gctgccgctg atcgcggccg gcgatgtcgg gcgcaccgag cggcaggagc gtgtcgccgc
     1681 gatattgaag caggtggggc ttggtcccga tatcgctgaa cgctttccgg ggcaactctc
     1741 tggcggccag cgccaacgcg tcgccatcgc gcgtgcgctg gtgctgcggc cgcgcattct
     1801 gatctgcgat gagccgactt ccgcgcttga tgtgtccgtg caggcgcaaa tactcaatct
     1861 gctcgccgat ctgcggagcg cgttcgaact gacactggtg tttatcagcc acaacctcgc
     1921 ggtggtcgag catgtcgccg atgcggtcgc ggtcatgtat ctcggtcgta tcgttgagca
     1981 tgacgtggcg gacgcggtat tccgttcacc gcgtcatcct tacacgaagg ctttgctggc
     2041 ctcggttctg acaccggatc cggggctggg gctaccggac gtgtcactgg gcgacgacta
     2101 tcccgacccg gcgcatattc cctccggttg ccgcttccat acgcgctgcc ctgtggcgat
     2161 accgcgttgc cgaacagagc cgccggcgcg caaggcggtg gagtgtcatc tcgtccccgc
     2221 ataggttttg tcaggttcgg aaacaggaga ctgctatgaa acgtcggact ttccttggca
     2281 ccgctgccgc cggtgcggtt gttggctctg cggcgcaggc gcagaagtcg gacgacacgc
     2341 tgcgtgtgac atggcgcgat gccgttccgg atgtggaccc ttaccgcaac agcctgcgta
     2401 ccgggatcat cgtgtcccac gaggcatggg acatgctggt ttaccgcgat cccaatacct
     2461 tcaagatcgt gcccgccctg gccacatcgt ggacgttttc ggacccgacg acgttggact
     2521 tcacattgcg cccgggggtg aagttccaca acggcgaccc gttctcggcg gacgatgtcg
     2581 tctatacatt caacacgatc atcagcgatc cgaagacgtc ggtaccgagc aacttcgcgt
     2641 tcattgccgg tgcggaaaag cttggcgatc tgaaggtgcg gataaagctg aagacggtgt
     2701 tccccgcggc gctggaatac ttcgccatgg cgttgccaat ctatccgaaa gcgtatcggg
     2761 agaaggtcgg cggggcggaa tattcgcaga agccgatcgg cacggggccg tatcgtatca
     2821 ctcgcgtcaa tggctccagc gaaatcgata tggagcggtt cgaggactac tacaaggaca
     2881 gtccgaaagg gcgggcggcg atcaaatatc tcaagatcaa ccaggtgttg gatgcggccg
     2941 gcgaactgac ggcgttcatc agcgggcagg ccgactggat ctggcagtac aaccccgatc
     3001 aatttgacaa cctgaagatg ctgccgggca agacggcgat ccgagcggga tcgatgcgta
     3061 tcggctatct gcaactcgat gcggcggggc gaacgggcgc gggcaatcca ctgacgaagc
     3121 agaaggtccg tcaggcgatt tgccacgcga tcgatcggca cgcaatcgcc cacgacctgg
     3181 tgcagggtga ttcccatccg atcgacgccc cctgttaccc aacgcaattc ggctgcgatg
     3241 caaaggccgc gattgattac gattacgacc caaaactggc taaacagttg ctgacggagg
     3301 cgggttaccc caacggcttt tccacctcgc tggtgacgta tctgctgtcg tcgttcagtg
     3361 ccgcggtgca gaactacctg aaggtgatcg ggatcaccgc cgacattcag cagcttcagg
     3421 taggggcgga gatccagaag gtgatggcag gccagacgcc gatgaatttc ggtacctggg
     3481 gcagctattc gatcaacgat gtgtcggcga tcctgccgta tttcttcggc ggcggagcga
     3541 acgattatgc gcgcgatccg caggtgacgg ccgatgtgaa acagggcggc ctggtgatcg
     3601 atcccgaggg caggatcaag cattacagcg cggcgatcaa gcgtatcacc gagcaggcat
     3661 attggttgcc gatgttcacg tcggtaacgc agtacgcctt cgcgaagaac ctgaagttca
     3721 ccccgtttcc ggatgagttg ccgcgcttct atctatgcgc ctgggtgtag ccacgagcgc
     3781 gatgcggtat cgtcagatgc gcgaccggcc gatgacgccg ggcgccattc cgaggggccc
     3841 gcgaaccatg gaggagagtt tactgtgatc acggcgatcg ttctctatga cctgccgccg
     3901 aacatcgaca aagaggcctg ccgggcccat ttccactcca ttgcgccagg cttcctcgat
     3961 gttccaggat tggtccgcaa acagttcatc cacgcgaccg agggtggggt cgccggcggg
     4021 tgttaccttt gggaaagcca ggccgcagcc gaaacgttct attccgggcc gtggcgcgag
     4081 ggcatcatac ttcgatacgg tgcgccaccg cgtatcacct atttcgatac gctcgcgata
     4141 gccgacgtac cggcccggca ggcggttgca tttcacgact gattggtacc cggcgttcgc
     4201 cgggaccggc tccggcgctg tagtggcatc tgtcttgcag gcctgcacat gcggacatgg
     4261 agtcgaatgc ggatggcaaa gcagcctttt cacctgggat ggttcgtcat gaagggctac
     4321 ggcccgaaag gatggcggaa cctgtggggc gggccgaatc cgcatggctg ggtcaagccc
     4381 gaccttctgg tccacctcgc caaggagctg gagcgggcgg ccttcgacta cgtcatgatc
     4441 gaagattcct gcaacgtccc gtacacctac aagaattcgc acgagaccta cctgcggctc
     4501 gcggtcgatt caccgaagct ggacccggcc gtgctggcgc cgttcatgat ccaggcaacc
     4561 cagcggatcg gcatcatcac cacgctgtcg accaccgagt acaacccgtt tctgctggcc
     4621 cgcctgacca acgcactgga tcacgtcagc gacggacgcg ccggctggaa tctggtcacc
     4681 ggcagcaatg acggcggtgc ccagaatttt ggccacgaac ggcaatttcc gcatgatgag
     4741 cgttacgaca tggcggacga atatgtcgaa ctggtgcaga agctctggga ttcctgggac
     4801 gccgacgcga tggtgatcga ccaggaaaac gagatcttcg ccgacccggc aaaggtccgc
     4861 ccggtgttcc atgagggcaa atattttcgc tctcgcggac ctctgtcggc accccgatca
     4921 ccgcagggac atccggtgat ctgccaggcg ggaggctcgc cccgaggccg cgcctttgcc
     4981 gcgcggtggg cggacacggt catcgcctcg gccggcagcg ttgcgggaat gaaggcgtac
     5041 cgcgatgaca tccggaccca ggcggcggcg ttcggtcgta acccggatga catcaaggtg
     5101 atgttcctga tcgccccgat catcgacgaa ttcatggaca cggcgctggc ccgcaagcag
     5161 gcgaggctcg cggacaccga gagccatatc gagtttgccc tggcgaacat gtcgcgggtg
     5221 accggcatcg atttctccaa atacgatctg gatgaaaagc tgccggaact gacctcgaac
     5281 ggtcatctgt cggtggcaaa agcctattcc ggacgcaccc cgcgtgagat cgccatgcaa
     5341 ggccggtcgt tgagcgatgc cgatcttgtg ggcacgccgg atagggtcgc ggcccagatg
     5401 gcggagatca tggaggccgt cggtggtgac ggcttcctgt tcatggatcc ggacttcacc
     5461 cggcgctaca taaccgagat cgccgacggg ctgaccccag ccctgcagaa gctcggtctc
     5521 gtgcgcaaga aatacgagca cgccatgctg cgcgacaacc tgcgtgcctt ctgacaggca
     5581 gccgaaattt ggcagggggt caaacgcctg tccttcagtc acccggcgcc cgcattctat
     5641 gcacaggcgg cattcagccc gggcgtgatc gtggcacgcc gcttgctgcg tgtagataca
     5701 gcgacgccgg acacacggcg cgcctgggag caaacgttcc gcctgacttc aagcaggagg
     5761 atcgatcgga cgtgataacc caggccctaa ggaacagcac gcgatgacgt atcgactaac
     5821 ccgccgctcc ggcttgttgg caggtgccgc ttcagtgctg tcggcttcct ggctccgcac
     5881 cgcagtggcg gatgagaccg gcacgttgac ggtcgcgctg tccaccaacc cggtgacctg
     5941 cgatccgatc aacagctcca gccatgactg ggaaatcatc agcgaatcga ttttcgagaa
     6001 ccttgtcgag ttcgatatcg acggcaacct gaagccgcag cttgccaagg cattgccgga
     6061 gatttccgcc gatgcgcttg tctatacgtt tgacctgcgc gacgacgtgc tgttccacga
     6121 cggcacgccg atgacgtcgg aggatatcaa gtacagtctg gaatatatca tcaatccggc
     6181 gaacaaggca tcccgcggac cgattttcaa ccggctgtcg catgtggaga cggatggccc
     6241 acatcgtgtg catgtgcacc tgaaggtgcc gtttgcgcca tggacggcat tcctgacgaa
     6301 attcatgggt gtgttcccga aaggctcgcg ggagaagtac ggcaacgagt attttcgcgt
     6361 gtcgcccaag ggtgtgggca ccggccccgc catgttcgag gaatggaagc caaacgacta
     6421 tatcagcatg cgccggaatc cgcactactg gcagaagggc ttgccgcact gggaccgggt
     6481 ggtggtaaaa atcgtgcccg aggatgcaac acgcgtggcg tacctgctgg ccggacaggc
     6541 agatattatt ggggcgcccc cggcgcgcga gttcagtcgc cttaaaacac gcaaaggcat
     6601 ccagggggca gccgttccga cattcggcgg ctggacagtg atgttccaga atatctccaa
     6661 gccgcctttc gacgatattg aattccgcag gtgcattcag catgcggtgg atcgcaagac
     6721 catcgccgat aagatctact acggcctggt ggaaccgtcc ggcattccag cacccgcctc
     6781 ggcgtggtgg tacgacaagc aggccgacga aatgaccgcg tacaatccgg atctggccaa
     6841 gcagcatctg gcgaaatccc gctacccgaa cggcaccgag ttcgagatgg aagtcagtgc
     6901 cgagccgtat ctgctggatg ccaaggatgc ggcggtattc gtgcagtcag agctggcgaa
     6961 gttgaacatc aaggtcaatc tgcgggtgtc atcgtcgcag atcgtgcaga gcaatatcat
     7021 gggtggaaca tatcagtccg ggctggcgaa tttcatgtcg ccgggcgagg caacgtattt
     7081 cctgatggcg agtttcaccg ccaacagctt catgtcgaaa acggtgggca actttaccga
     7141 ccccgaggtt gccgctgcgc tgaagattgc gttcgccgag accgatcggg aaaagctgaa
     7201 gccggtctat gccaagctga tgcgttacct cgccgacaca tcctatttta cctggatcgg
     7261 ttatttcgcc gcggccaatc tgtggcgcga ccgggtcaag aacttcaggc ccagccgcgg
     7321 tcttaccatc aacgtttacg acgtttcgat gtcctgatgc tcgcactgct gctccgccga
     7381 gtcggctttt cgctgctgtc cctggtgctc gtctcatcgt gtctgttcgt gctgacccga
     7441 gcaatcccgg acagcccggc ccgtatcgtg ctggggcagg acgggacgca ggcgcagatc
     7501 gctcagttcg aacatgatca cggcctggat cgtccggtgg ccgtgcagta tggcctctgg
     7561 ctaaaaggca tgctgctgca tggcagtttg ggaacatcgt tcatcactgg ccggccggtc
     7621 ggacccgaca ttgccgccac attgccggtg acactggaac tcgtcgttgt ggcattcgtc
     7681 ttttcctgcg tgctgtcgat acttgcgggc acgctatccg cattgttgcg cgacaccgtg
     7741 ctcgactacg gcactcgcct ggtcgcagtg ctcggtgttt ccgtgccggg gttctggctg
     7801 gctctggtct tgatcatggc attcgcggtg gatcgggatt ggtttccgcc cggcggtgtc
     7861 gccccttggt cagcgggcgt attgcaacat cttgattcaa tcgccttgcc aacgttttgc
     7921 ctcggcattt tctatatggc ggtactcagc cggatgactc gctccagcat gctggaggtg
     7981 ctgggc
//
LOCUS       DATAVD010000406         5982 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_784703, whole genome shotgun sequence.
ACCESSION   DATAVD010000406 DATAVD010000000
VERSION     DATAVD010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5982)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5982)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5982
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_784703"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1842)
                     /gene="glgX"
                     /locus_tag="VHX39_07560"
     CDS             complement(<1..1842)
                     /gene="glgX"
                     /locus_tag="VHX39_07560"
                     /inference="COORDINATES: protein motif:HMM:TIGR02100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004133 - glycogen debranching enzyme
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HEX3991014.1"
                     /translation="MTSGWPSESEPEPLGVSLSGDGVNVAVFSANASAIEFCLFDGDR
                     EIRRVPLRGRTGDVFHDHVPDIAVGARYGLRAHGPYHPAEGHRFNPAKLLLDPYAMAI
                     DRPFVLHASMLDYRAGSAADNLSPDDTDSAPFMPKGIILGPRAARELSPPITPWSDTV
                     LYELHVRGFTIAHPDIPQPLRGRFAGLAHPAAIEHLLRLGVTTVEIMPAAAWVEERHL
                     AALGLRNYWGYNPVTFMAPDPGLAPAGWEGIRAAVGALASAGIEVVLDVVLNHTGEGD
                     ALGPTLSLRGLDNATYYRALPGAPWRYANDTGCGNTLALDRPAPLRLMMDALRLWAQE
                     SGLHGFRFDLATTLGRRADGFDPAAPLLSAIAQDPFLRDLKLIAEPWDIGSGGYQVGA
                     FPSGWGEWNDRFRDSVRRFWRGDPGQLGELATRLAGSSDLFGKRGVASRSINFVVAHD
                     GFTLADLVSYTHKVNAANGEANRDGTDANFSWNNGAEGPVDDPAILTARRKDQRALLA
                     TLLLARGTPMLGMGSELGHSQGGNNNAYAQDNATAWLDWAAADAGLLAWTSQLLQIRQ
                     AFPLLRGNRFLTGAPFDGGSLPDVEWRDAAGKGMTSDAWWAPAGNTLV"
     gene            complement(1880..3325)
                     /gene="glgA"
                     /locus_tag="VHX39_07565"
     CDS             complement(1880..3325)
                     /gene="glgA"
                     /locus_tag="VHX39_07565"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HEX3991015.1"
                     /translation="MNVLSVASEIFPLVKTGGLADVIGALPAALAEQGIAVRTLIPGY
                     PAVTETIEQVQTVRSEIDLFGGAAQLLAARAADLDLLVLDAPHLYARPGNPYLGPDGR
                     DWPDNALRFAALSQMAADICTGALQSYAPEVLHAHDWQTGLAPAYLHYRGGARPGTVM
                     TVHNLAFAGKASRDLLGLLGLPPQSYAIDSLEFYGTVSFLKAGLQFADRITTVSPTYA
                     AEICTDDASMGFGGLLRSRSGVLSGILNGIDTEVWDPATDTLLAAPFDRTTLARRALN
                     KAALQARLGLDQDPGAPLFGIVSRLTWQKGTDLVLACLPVLQELGVQLALIGTGEAGI
                     EAGFRSAAERTPNRIGCFIGYDETLAHLVQAGADALLVPSRFEPCGLTQLCALHYGAV
                     PVVARVGGLADTVIDANAAALAAGVATGVQFAPVDAAMLDLALRRTVALYREPSVWHT
                     LQENGMATDVSWRGPARQYAALYRKLVAARA"
     gene            complement(3334..4599)
                     /gene="glgC"
                     /locus_tag="VHX39_07570"
     CDS             complement(3334..4599)
                     /gene="glgC"
                     /locus_tag="VHX39_07570"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_025319829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008878 - glucose-1-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HEX3991016.1"
                     /translation="MYPTRTVTAPLARHAMAFVLAGGRGSRLMELTDRRAKPAVYFGG
                     KLRIVDFALSNALNSGIRRMAVATQYKAHSLIRHLQRGWNFFRPERNESFDILPASQR
                     VADDKWYLGTADAVFQNIDIIESYDPRYIVILAGDHVYKMDFEPMLQQHVEQGADVTV
                     GCLEVPRSDATGFGVMHVDATDRILAFQEKPANPPPMPGRPDMALASMGIYVFNTRYL
                     FDQLRADAADPNSSHDFGRDIIPRLVGSAKAVAHPFERSCVRSSAESPPYWRDVGTLD
                     SYFSANIDLTDVVPDLDLFDRDWPIWTYGEMTAPAKFVHDEDGRRGAAYSSVIAGGSI
                     ISGATMRRSLVFTGVKVHSYADVAFAVILPEVEIGNSAYLRNVIIERGVRIPPGLVVG
                     QDPLLDGQRFRRTANGVCLITQPMIDQLR"
     gene            complement(4784..>5982)
                     /gene="glgB"
                     /locus_tag="VHX39_07575"
     CDS             complement(4784..>5982)
                     /gene="glgB"
                     /locus_tag="VHX39_07575"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003844 - 1,4-alpha-glucan branching
                     enzyme activity [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HEX3991017.1"
                     /translation="LGVILDWVPAHFPTDVHGLAHFDGSPLYEHADPKKGFHPDWNTA
                     IYDYGRREVVNVLAASALYWMDRFHIDGLRVDAVASMIYLDYSRQPGEWTPNADGGRE
                     NWDAVRFLRQVNTLTYGLYPGTVTIAEESSEWPAVSGPADTGGLGFGFKWNMGWMHDT
                     LDYISQEPAHRRWHHDKLTFGLLYGFSENFILPLSHDEVVHGKRSILGRVPGDAWQRA
                     ATGRTYYAFMWAYPGKKLLFMGQEFGQLAEWNFASQLDWHLLNEPLHAGLLRCVRDLN
                     RVYSENPALHVRDCEGEGFHWIVVDDASQSVFAWLRRGFSNDPPVAVICNFTPVPRHD
                     YRIGLPLAGRWRELLNTDASEYGGSGLGNLGGVQAAESPSHGMPASATLLLPPLAALY
                     LQYEAA"
BASE COUNT         1268 a         1923 c         1790 g         1001 t
ORIGIN      
        1 caccaacgta ttaccagccg gcgcccacca ggcgtcagaa gtcatgcctt tgccggccgc
       61 atcgcgccat tcgacatcgg gcagcgaacc gccatcgaac ggcgcgccgg tcagaaagcg
      121 attgccgcgc agcagcggaa acgcctgccg gatttgcagc aactggcttg tccaggcaag
      181 caacccggca tccgccgctg cccaatcgag ccatgccgtc gcattatcct gggcataggc
      241 attgttgttg ccgccttgcg aatggcccaa ctcagagccc atgcccagca tcggtgtgcc
      301 gcgcgccaac agcagcgtcg ccagtaaggc ccgctgatcc ttccgtcgcg cggtcaatat
      361 ggcaggatcg tcgaccgggc cttccgcacc attgttccag gagaagttcg cgtcggtacc
      421 gtctcgattg gcttcgccat tggcggcgtt cactttgtgc gtatacgaaa cgaggtcggc
      481 gagggtaaag ccatcatgcg ccacgacgaa gttgatcgaa cgcgaggcaa cgccacgctt
      541 gccgaacaaa tcggacgaac cagcgagacg tgtcgccagt tcgcccagtt ggcccgggtc
      601 gccacgccag aaacgccgca cgctgtcgcg aaaccgatcg ttccactcgc cccagccaga
      661 cgggaacgcg ccaacctgat aacccccgga cccgatatcc cacggttccg caatcaactt
      721 taaatcccgc agaaacggat cctgggcgat cgccgacaac aagggcgcgg ctggatcaaa
      781 accgtccgct cgccgcccca gagtggtcgc gagatcgaag cggaagccat gcagaccaga
      841 ctcctgcgcc cacaggcgaa gcgcatccat catcagccgc aatggcgccg gacgatccag
      901 cgcaagtgtg ttgccgcaac cggtatcatt ggcatagcgc cagggcgcac cgggcagcgc
      961 gcggtaatac gtcgcattat ccagaccgcg cagcgacaac gtcgggccaa gagcgtcgcc
     1021 ctcgccggtg tgattcagca ctacgtccag aacgacctcg atgccggcgg aggccaacgc
     1081 gccgaccgcg gctcggatcc cctcccagcc tgccggagcc agtccgggat ccggcgccat
     1141 gaaggtaacc gggttataac cccagtagtt tcgcaaaccc aacgcagcca ggtggcgttc
     1201 ctcgacccat gccgcagccg gcatgatttc gacggtggta acgccgagcc gcaataaatg
     1261 ctcgatggca gccggatgtg cgagaccggc gaagcggcca cgcaacggct gcggaatatc
     1321 gggatgggcg atggtaaagc cccgcacatg caattcgtac agcacggtat cggaccacgg
     1381 cgttatcggt ggcgataatt cccgcgcagc gcgaggtccg agaatgatcc ccttgggcat
     1441 gaagggcgca ctgtcggtat cgtcagggga cagattgtcc gcggcagaac cggctcggta
     1501 gtcgagcatt gaagcgtgca atacgaacgg ccgatcgatt gccatggcgt atggatcaag
     1561 cagcagcttg gccggattaa atcgatggcc ctcggccgga tgatatggcc catgtgctcg
     1621 caatccataa cgcgcgccca cggcgatatc cggaacgtgg tcgtgaaaca cgtcgccggt
     1681 acggccgcgc aatggtaccc ggcgaatttc gcggtcgccg tcaaacaggc aaaattcgat
     1741 tgcactggcg ttggcggaga agacggcgac attgaccccg tcaccgctca ggctcacccc
     1801 aaggggttct ggttcgcttt ccgatggcca gcccgatgtc attcctgccg tcccgccaga
     1861 tgttcgcagt caggccgcat catgcccgtg ctgctaccag tttgcgataa agcgcggcgt
     1921 actgacgcgc gggaccgcgc cacgagacgt cggtggccat gccgttctcc tgaagcgtgt
     1981 gccaaacgga cggctcgcga tacaatgcca cggtgcgccg gagcgccaaa tccagcatcg
     2041 cagcatcgac cggggcaaat tgcacgccgg tcgcgacgcc ggccgccagc gctgcggcgt
     2101 tggcgtcgat caccgtgtcg gcaaggccgc cgacccgtgc gacaacaggg accgcgccat
     2161 agtgtaacgc gcacaactgg gtcagaccgc agggttcgaa acgcgagggt accaacaatg
     2221 cgtccgctcc cgcctgcacc aggtgggcca gtgtctcatc ataaccgatg aagcagccga
     2281 tccggttcgg cgtccgctcc gccgcgctcc gaaatcctgc ctcgatgccc gcttctccgg
     2341 taccgatcaa cgccagttgc acaccgagtt cctgcagcac gggcagacag gccaacacga
     2401 gatcggtccc cttctgccag gtgagccggc tgacgatccc gaataacggc gcgcccgggt
     2461 cctgatccag gccaagccgt gcctgaagcg ccgccttatt tagcgcccgc ctggccaggg
     2521 tcgtgcgatc gaatggtgcg gcgagcagcg tgtctgttgc gggatcccag acctccgtat
     2581 cgatgccgtt cagaataccc gacagcacgc cggaacgtga acgcaacaaa ccaccaaacc
     2641 ccatgctggc atcgtcggtg caaatctccg cggcataggt cggcgatact gtcgtgatcc
     2701 ggtcggcgaa ctgcaagccg gctttgagaa agctgacggt accgtaaaac tccaaactgt
     2761 cgatggcata agactgcggc ggcagaccga gcaagcccag taaatcgcgt gatgccttgc
     2821 cggcaaaggc gaggttatgc acggtcatca ccgttcccgg ccgggcgccg ccccgataat
     2881 gcagataggc aggtgccagg ccggtctgcc agtcatgtgc gtgcaggact tcgggtgcat
     2941 aagattgcaa cgcgccggtg cagatatcag ccgccatttg cgacaaggcc gcaaatcgta
     3001 gtgcattgtc cggccagtcc cgcccgtccg ggccaagata tggattaccc ggccttgcgt
     3061 agagatgcgg cgcatcgagt accagtaaat cgagatcagc cgcgcgggcc gccaacaatt
     3121 gcgcagcgcc gccaaacaaa tcgatttcgc tacgaactgt ttgcacctgt tcaatcgttt
     3181 cggtaacggc ggggtagccc ggtatgagag tgcggaccgc gatcccctgc tcggccagtg
     3241 cggcgggcaa tgcaccaatg acatcggcca gccctccggt cttgaccaac ggaaagatct
     3301 ccgaggccac cgacaaaacg ttcagaggct gcattaacga agctggtcga tcatgggctg
     3361 ggtgatcaaa cagacaccat tggccgtgcg gcggaagcgt tgcccgtcga gcagcgggtc
     3421 ctgaccgacc acaaggccgg ggggaatgcg cacgccgcgt tcgatgatga cgttgcggag
     3481 atacgccgaa ttgccgattt cgacctccgg caaaatgacc gcgaaggcaa catcggcgta
     3541 ggaatgcacc ttgacgccgg taaacaccag cgatcgccgc attgttgcgc ctgaaatgat
     3601 cgaaccaccg gcgatcaccg aggagtaagc cgcgccacgg cggccatcct cgtcgtgcac
     3661 gaactttgcc ggcgcggtca tctcgccata ggtccagatt ggccagtcgc gatcgaacag
     3721 atcgagatcc ggaacgacat cggtcagatc tatgttcgcg gaaaaatagg aatccagtgt
     3781 cccgacatcg cgccagtacg gcggcgactc ggccgacgat cgcacacagg atcgttcgaa
     3841 cgggtgcgcc acagccttcg cgctgccgac cagacgcgga atgatgtcgc ggccgaaatc
     3901 gtggctcgaa ttcggatcgg ccgcatccgc acgcaactgg tcgaacaaat agcgcgtgtt
     3961 gaaaacgtag atacccatgc tggcgagcgc catgtccgga cgtcccggca ttggtggagg
     4021 gttcgccggc ttctcctgaa acgccaggat gcggtcggtc gcatcgacat gcatgacgcc
     4081 aaaaccagtg gcgtcgcttc gtggaacctc gagacagccg acggtcacgt cggcaccctg
     4141 ctcgacgtgc tgttgcagca tcggctcgaa gtccattttg taaacgtgat cacccgcgag
     4201 gatgacaata taacgcggat cgtaactttc gataatatcg atattctgaa atacggcgtc
     4261 ggcggtgcca agataccatt tgtcatcagc gacgcgttgg ctcgccggca gaatatcgaa
     4321 actttcgttg cgctccggcc ggaagaaatt ccagccgcgt tgcaaatggc gaatcaggct
     4381 atgggccttg tattgcgttg caaccgccat gcggcgaatg ccggaattca gggcgttgga
     4441 cagggcgaag tcgacgatac gcagcttgcc accgaaataa accgcgggct tggcgcggcg
     4501 gtcggtcagc tccatcagac ggctgccccg cccacccgcg agcacgaagg ccatggcatg
     4561 ccgggccagc ggggcggtga cggtccgggt cgggtacatc gacggctcct tcctggtgtt
     4621 gtgtgcgctg gtctgccaac gcaccccccg atgacgaacg cacggtcgcg ccaggctccg
     4681 cccatgggca ttcaggcgac aacccagact cggcacgggg tcggccaagg gtcaccacgg
     4741 acccgtccac cccgcaacat gatggagcgg ccaccttcgc ttgtcacgcc gcttcgtact
     4801 ggagatacaa cgcagccagc ggcggtagca gcagcgtcgc agaggctggc atgccatgcg
     4861 acggtgactc ggcagcctgg acgccgccaa ggttgccaag tccggagccg ccgtactcgg
     4921 aggcatcggt attcagtaac tcccgccagc gtccggcaag cggcagacca atacgataat
     4981 cgtggcgcgg gaccggggtg aaattacaga tcaccgccac cggaggatcg ttcgaaaatc
     5041 cccgccgcag ccaggcgaac accgactggc tggcgtcatc gaccacaatc cagtgaaatc
     5101 cttcgccctc gcagtcgcgc acgtgcaacg ccgggttttc gctatacaca cggttgagat
     5161 cccgcacgca acgaagcagc ccggcgtgca gcggctcatt caacagatgc cagtcgagtt
     5221 gcgaggcaaa attccattct gcgagctgcc cgaactcctg tcccatgaac agcagtttct
     5281 tgccgggata agcccacatg aatgcgtagt aggtccgccc agtggcggcc cgctgccacg
     5341 cgtcacctgg cacccggccg aggatcgagc gcttgccgtg cacgacctcg tcatgcgaca
     5401 gcggcaagat gaaattctcc gaaaatccat agagcagacc gaatgtcagc ttgtcgtggt
     5461 gccagcgtcg atgcgccggt tcctggctga tatagtcaag cgtgtcatgc atccagccca
     5521 tgttccactt gaagccaaag cccagacctc cagtgtcggc cggccccgac acggcgggcc
     5581 actcggagga ctcttcggca atggtaacgg tgccggggta cagtccatac gtcagcgtat
     5641 tgacctggcg cagaaagcgg accgcgtccc agttctcgcg tccaccgtct gcattcggcg
     5701 tccactcacc aggctgccgc gaataatcga gataaatcat cgaggcgacc gcatcgaccc
     5761 gcaacccgtc gatgtgaaac cgatccatcc aatacaacgc gcttgccgcc agcacgttca
     5821 ccacctcacg ccggccgtaa tcgtaaatcg ccgtgttcca gtcaggatgg aagccctttt
     5881 tggggtccgc atgctcgtac aggggcgaac catcgaagtg tgccaggcca tgcacgtcgg
     5941 tcggaaagtg cgccgggacc cagtcgagga tcacgccaag tc
//
LOCUS       DATAVD010000407        11510 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_595736, whole genome shotgun sequence.
ACCESSION   DATAVD010000407 DATAVD010000000
VERSION     DATAVD010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 11510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11510
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_595736"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(210..1586)
                     /locus_tag="VHX39_07580"
     CDS             complement(210..1586)
                     /locus_tag="VHX39_07580"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX3991018.1"
                     /translation="MTGLPDILASERLAAHVAAVRFDCLPESAVVAAKVWILDTLGVG
                     IAGSSAAGMEAVRAAAAGWGNGDEATIWGTSRRAPAPAAAFINGTQVHNQEFDCLHEG
                     AVVHAMATLLPALLAMAERKGGVSGRDLIAAVVAGIDIAANLGLAATAGFRFFRPATA
                     GGFGAVAGLATILGLDAERTADAFGLQYGQTSGTMQPHAEGNALLPMQVGFNAQSAIR
                     AADLAAAGVSGPRDIFEGRYGYFPLFEGSWDLQPIWAGLGRDWRVCEMSHKPWPAGRA
                     THGGIEGLLALREAHGFRASDVRRVRVIVPPLTHRLVARPDVPAPNAFYARLCMAFIG
                     AKALLTGTVDIDHCRGEALTDKATHDLALRIVTEMNGNPDPNALAPQRVEVSLRSGET
                     LRWTCETMLANPARPLTRGQHVQKFTRCLEFAQEPLAAIGLIDLVDRLEQVEDVRALC
                     ALLAPVTS"
     gene            complement(1583..2509)
                     /locus_tag="VHX39_07585"
     CDS             complement(1583..2509)
                     /locus_tag="VHX39_07585"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HEX3991019.1"
                     /translation="MRPDQLSNAPGTTRRRTLMVGSLASIALRPTRGWADSPGIVASF
                     SILADMVHRVGGNLVSVTSLVPPDADVHVYQPTAADSRSLTTASMLVENGLGLEGWMA
                     RLAEASDFRGVRVVASNGVTPRQMREGDAITLDPHAWQNPRNGVIYVRNIADGLVAAD
                     QRHAETWRSNAAAFVAEIEQTDAWIAGQIATIPATARRIVTTHDAFGYYGDRYGVTFL
                     AAEGISTDAEPSAKGIAALVRQVKQERVRMVFLENMTDSRITKTLAQETGAIVSGPLY
                     SDALSRPDGPAPDYLTMLRYNTAWFVRAMQAG"
     gene            2558..3436
                     /locus_tag="VHX39_07590"
     CDS             2558..3436
                     /locus_tag="VHX39_07590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014457529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase"
                     /protein_id="HEX3991020.1"
                     /translation="MLAPMSSFPVHVVGASGRSGAALARVLGSRIVPVVRDAAKWAAL
                     GFDVTPMIADLTDPLALARALCGATHVVSCAHARFAPELIAAAPEGARLVLLGSTRKF
                     TRWPDAHGNGVLAGEAAFLQSGRAGVMLHPTMIYGAQGEDNVQRLAALIRRLPVLPLP
                     AFGRSLVQPIHQSDVTRAILVALEHPWTGPQTMVIAGPEPMSYRDFIRAVAVASGARQ
                     PHTLSVPAGPLIALARLTRFLPGVPTIDGAEIRRLLEDKAFDIAPMRDVLGVTPISFR
                     EGLALTFPPLHRSSLD"
     gene            3464..4639
                     /locus_tag="VHX39_07595"
     CDS             3464..4639
                     /locus_tag="VHX39_07595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20 aminoacylase family protein"
                     /protein_id="HEX3991021.1"
                     /translation="MPIINRIAEFQTDMTEWRRDLHAHPELSMQEFRTSAMVQEKLKS
                     FGIDEIITGMAGTGVVGVIRAGTSDRAIGLRADMDALPIQEETGLDYASQTPNVMHAC
                     GHDGHTTMLLGAAKYLAETRNFDGTVYLVFQPAEEFEGGADRMVQDGLFTRCPMEQIF
                     GLHNWPQSPEGTFLWRSGDVMAAVGWIDITITGKGSHGAFPHQGVDPVVVASTIVTAL
                     QTIVSRNMEPIQGGVVSIGHISGGDAYNILPERVVMKGTARWFRPQVGDIIEAGVHRL
                     ATGIAASFGAIAEVKFTRHCPATVNDEDATVLAVAAAETISGRAKVKHMPMPTMGGED
                     FAYMLEKKQGAYLMLGGGRGKDEPLLHHPRYDFNDAILPIGSSWYSTLVERHLARKN"
     gene            complement(4647..5465)
                     /locus_tag="VHX39_07600"
     CDS             complement(4647..5465)
                     /locus_tag="VHX39_07600"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3991022.1"
                     /translation="MQSQSSERQTRTICPACASEHLTAQFDRQSWSRQFEHSTDVRET
                     FAEMMCADPRLAFDKMLICDNCGTLFPDQVPPIEALSDFYTSHYGDAVHVGKMAKKLG
                     LEKRRIFLLKWLTRGRRFLDVGCNIGCAVEAARWNGFNATGIELNPEAVRIARENFPN
                     NQFLHSTLDEVAATQAFDMVYCTEVVEHVPDTNAFIESLSRALTPGGILFLSTPDAGH
                     FSVRRQLFTWEAVKPPEHLTLFTKAGLRHALKPHFKSLWFFPNQKPGIQLIARR"
     gene            complement(5557..6447)
                     /locus_tag="VHX39_07605"
     CDS             complement(5557..6447)
                     /locus_tag="VHX39_07605"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HEX3991023.1"
                     /translation="MRDDLPVWRSLMFVPVNVDKFVRTGADRGADGIILDLEDAVAPS
                     QKDLARTLIAGAIPQVSRNGADVLVRVNRPWRMLVRDVEAAVIPGICALMLTKVDSPE
                     HVLAVAEIVDELEAERNLPAGSVKFAVLVETTRGFFRMEEIAKCHPRIVSLSLGSEDF
                     AADAGMQSEPEALFYPKQHMLFAARAAGVMPMGFVGSIADFRDQDAFRAIVRRSRRLG
                     FVGASAIHPLQVPVLNEEFSPPPAEVARAEQMVAAYDDAYARGLGAVQFEGAMIDVPV
                     VERARTVLKRAAAIRKRVGA"
     gene            complement(6523..7743)
                     /locus_tag="VHX39_07610"
     CDS             complement(6523..7743)
                     /locus_tag="VHX39_07610"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3991024.1"
                     /translation="MIPRVEFDPAAPVPLAGLRVVDLSRLVAGNMVSLQLADQGAEVI
                     KIEDPTVGDPLRAWRVKGLSLHWKVYARNKKSLALNLRPQAGKDVLHDLLAKSDVLIE
                     NFRPGTLEEMGFGPDVLHRRNPRLIIVRITGFGQDGPYRDRPGFGTLVEAMSGFASKN
                     GFEDRPPVLPPLAMADMISGLYGAYAIMVALRVVERGGKGQVIDLPLLEPMISVLGPD
                     AAIYKVSGQKPRRTGSRSLTTSPRNVYETSDNRFIAISASIQAMAERVFRAIGKPEMI
                     DDPRFRTNTDRVRNIDTCDQAVGAFIAARTLAENMAIFEAAEVTANPVYEIDQLLEDP
                     HVHGRGVLVEAPDADAGSVLMHNIIPRLSDTPGRFRLPAPGLGQHSRSILESIGVDTA
                     RIDALAVDGVIKEA"
     gene            8129..8905
                     /locus_tag="VHX39_07615"
                     /pseudo
     CDS             8129..8905
                     /locus_tag="VHX39_07615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006115104.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
     gene            8897..9277
                     /locus_tag="VHX39_07620"
     CDS             8897..9277
                     /locus_tag="VHX39_07620"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HEX3991025.1"
                     /translation="MVILSHVVGRPKGGKLVRPLSATVLLVGLLAGGTQVHAEDAAVQ
                     LAFTQHRFVPDRLVVPANVKFRVMVKNNDDTADEFESVDLNREKLVPSGQTITVFLGP
                     LSPGQYKFFGDFHQDTAQGVMVAK"
     gene            9274..10053
                     /locus_tag="VHX39_07625"
     CDS             9274..10053
                     /locus_tag="VHX39_07625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991026.1"
                     /translation="MTYGKFVLAAALVILAPVGAHADFHVVSPYEIDLGELEIEHNGD
                     AVFDRRPDQRGATSYTTELGTGLTSWWHSEIELGFDRAPGDGQPTLLTQAVWENMIEL
                     TEPGEQFADLGFYFEYGQSTTTGHNAASNEITFGPVIAKDIGRTTHTINLFFTRQLGP
                     DQTSQGLDFSYAWQSRWNIWAPLSPAIEIYGDTGTLGSVPRLSQQELLLGPVGVGRLQ
                     LNELGLGHAGVVKYEIGWLFGTTPATARGTLRWRLEVEIPF"
     gene            complement(10094..>11510)
                     /locus_tag="VHX39_07630"
     CDS             complement(10094..>11510)
                     /locus_tag="VHX39_07630"
                     /inference="COORDINATES: protein motif:HMM:NF017183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="putative Ig domain-containing protein"
                     /protein_id="HEX3991027.1"
                     /translation="GSSSDIIIQAPHLASQEWAGVAASSVVIYELDTPIVADTTGSCS
                     IAFHATLSLGPLFSATDPASRTITEWQIYDTATGDFLVLNGIDYGDHSAASALTVASL
                     SSVALLAGSVATTDTLDVRAYNGTYWGDWTALSVAVAGSAASAPVLKMQTPAQTWKGG
                     TAISLAVAFTDPQNEALTYGAQLANGQTLPSWLVFNAATDTFSGTPPATAQTLNIVVT
                     ATDTSHLAATDSFTATILGAPLVTAQTSSQTWTEGKAVSLTLAANSFTDPQGEKLAYT
                     ATLSNGQALPAWLRFNATTETFSGTAPSTAQTLGIKVTATDSSGLATSESFTATIQPA
                     PAPTPRPGITVSDPTPNQIWTDAQNVTLVLPANTFTDALGLKMSFAAYEVSGPNVTSW
                     LHFNASTDTLSGAVPANASGTIGLLVLATDAQNVRAEDMFNVTFASSSLHGAAAVTIG
                     LPGAASLSGNEPMSGLVAFHS"
BASE COUNT         2165 a         3488 c         3639 g         2218 t
ORIGIN      
        1 cgtgacacac cgttcacggt gcgggagact tctgcacaag gcccgataaa accggccggt
       61 gcgaccgagg gcgatgttgt caatgtacgc caggcaatct ttggcgtttg actccctgca
      121 agactacagc atgcagttca cgatcagcat gaaacgctgc aaatccgcag agcgcaatgc
      181 ggtcgatgcg gcgttttgca ggagacgaat cacgaagtca cgggtgccag cagagcgcac
      241 aacgctcgca cgtcctcaac ctgttccagc cggtcgacca aatcgatcag cccaatcgcc
      301 gccagcggtt cctgcgcaaa ctccaggcag cgggtgaatt tctgcacatg ctggcctcgg
      361 gttaaaggcc gtgccgggtt ggccagcatt gtctcgcacg tccaacgcaa tgtttcgccg
      421 ctgcgtaacg agacctcgac gcgttgcggt gccaaagcgt tggggtccgg attgccgttc
      481 atctcggtca cgatgcggag tgccagatcg tgggttgcct tgtcggtcag tgcctcgccc
      541 cggcaatggt cgatatcgac agtgcccgtc agcaaggcct tggcgccgat gaacgccatg
      601 cacagccgtg catagaatgc attcggtgcc ggcacatcag gtcgtgcgac aagacgatgg
      661 gtcagcggcg gcacgatcac ccgcacgcgg cgcacgtcac ttgcgcggaa gccatgtgct
      721 tcgcgcaacg ccagcaggcc ttcgatcccg ccatgcgtcg cgcggccggc gggccagggc
      781 ttgtggctca tttcgcaaac ccgccagtca cggccaagac cggcccagat cggttgcaga
      841 tcccagctgc cctcgaacag tggaaagtat ccgtagcggc cttcgaaaat gtcgcgtggg
      901 ccagaaacgc cggcagcggc gaggtcagcg gcgcggatcg cactctgcgc gttgaacccg
      961 acctgcatcg gtaacagcgc gttgccttcc gcatgcggct gcatcgtgcc actggtctgc
     1021 ccatattgca gaccgaaagc atccgccgtc cgttcggcgt ccagacccag aatggtcgcc
     1081 aggccagcga cagcaccgaa gccgccggcg gtggcaggcc ggaaaaagcg aaaccccgcc
     1141 gtggccgcca ggccgagatt ggcagcgata tcgatgccgg caacaacggc ggcgatcagg
     1201 tcgcgcccgg agactccgcc cttgcgctcg gccattgcca gaagcgccgg taacagtgtt
     1261 gccattgcgt gcacgacggc cccttcgtgc agacaatcga actcctgatt atggacctgg
     1321 gtcccgttga tgaacgcagc cgccggtgcg ggagcgcgtc ggctggtgcc ccaaatcgtt
     1381 gcctcgtcgc cgttgcccca gccggcggcg gcggcgcgga ctgcctccat gccggctgcc
     1441 gacgatccgg cgatgccgac gcccaacgtg tccaaaatcc agactttcgc cgcaacgacg
     1501 gcagattccg gaaggcagtc gaaccgcacc gcggcaacgt gagcagccag acgttccgag
     1561 gcgaggatat ccggcaatcc cgtcatcccg cctgcatcgc tcgaacgaac caggccgtat
     1621 tatagcgcag catcgtgaga taatccggcg cgggcccgtc gggccgcgac aaggcgtcgg
     1681 aatacagcgg accggacacg atcgcacccg tctcttgcgc caacgttttc gtgatcctgg
     1741 aatcggtcat attctccaga aacaccatgc gaacccgttc ctgtttgacc tgtcggacca
     1801 gcgccgcgat ccccttcgcg gagggttcgg catctgtgga aatgccctcg gctgcgagga
     1861 acgtcacgcc ataacggtcg ccgtaatagc cgaacgcgtc atgtgtggtg acgatgcgcc
     1921 gcgccgttgc gggaatggtg gcgatctgac cggcgatcca tgcgtcggtc tgttctatct
     1981 ctgcaacaaa ggcggcagcg ttgctgcgcc aggtttcggc atggcgctga tccgccgcga
     2041 ccagcccgtc ggcgatgttt ctgacataaa tgacgccgtt gcgcgggttc tgccaggcgt
     2101 gcggatcgag tgtgatggca tcgccctcgc gcatttgccg cggcgtcacg ccgttggagg
     2161 cgacaactcg cacgccccga aaatcggacg cctcggccag acgtgccatc cagccctcca
     2221 ggccaagccc gttctcgacc aacatgcttg cggtggtcag agatcgagaa tctgccgcag
     2281 ttggctggta gacgtggacg tccgcatcgg gcggaaccag gcttgtgaca ctgacgagat
     2341 tgccccccac gcggtgcacc atatcggcca aaatcgagaa acttgccaca attcctgggc
     2401 tgtcagccca tccgcgcgtt ggccggagtg caatcgaggc cagcgaacca accatcaaag
     2461 tgcggcggcg cgtggtcccg ggtgcgttcg aaagctggtc cggtcgcatt cgattggcgg
     2521 tccttctgct atggcgcaat gttcggctga atgcgacatg ctcgctccca tgtccagctt
     2581 cccggttcac gttgtcggcg cctctggccg atccggtgcc gccttggccc gcgtactggg
     2641 ctcccgcatc gtgccggtgg tgcgagacgc ggcgaaatgg gcggcgctcg ggttcgatgt
     2701 gacaccgatg atcgccgatc tgacggatcc gctggcgctg gcccgagccc tgtgcggggc
     2761 gacccacgtg gtgagctgcg cacatgcaag gtttgcaccc gaactgattg cagccgcacc
     2821 ggaaggggcg cgcctggtgc tgttgggtag tacgcggaaa ttcacacgct ggccggatgc
     2881 gcacggtaac ggtgtcctgg cgggcgaggc agcgttcctg caatcgggcc gagccggcgt
     2941 catgctgcac ccgaccatga tctatggcgc tcaaggtgag gacaatgtgc agcggttggc
     3001 cgccctgata cggcgattgc cggtgctgcc tctgcctgct ttcgggcgat cgctggtgca
     3061 gccgattcat cagagcgatg tcacgcgtgc gatccttgtg gcgttggagc atccctggac
     3121 cggcccgcaa accatggtga tcgccggacc ggagccgatg agctaccgcg atttcatccg
     3181 cgcggtggcg gtggcctctg gagcgaggca gccgcacacg ctgagtgtcc ctgcgggccc
     3241 gttgatcgcg ctcgccaggc tgacgcggtt cttgccgggc gtgccaacga tcgatggtgc
     3301 cgaaatccgc cggctgcttg aggacaaggc gttcgacatc gcgccgatgc gtgatgtcct
     3361 gggggttacg ccgatctcgt tccgcgaggg gcttgcgttg actttcccgc cccttcatcg
     3421 ttccagcctg gattgagccg gccattcgag acgggagcac tgcatgccca tcatcaaccg
     3481 tatcgctgaa ttccaaaccg atatgaccga atggcgccgc gacctgcacg cgcatcctga
     3541 gctgtcgatg caagaattcc gtacctcggc gatggtgcag gagaagttga aatcgtttgg
     3601 catcgacgaa atcattactg gcatggctgg caccggcgtg gtcggtgtga tccgcgccgg
     3661 cacgtctgac cgcgcgatcg gcctgcgggc ggatatggat gcgctgccga tccaggagga
     3721 gaccggcctc gactatgcca gccagacgcc caacgtgatg cacgcctgcg gccatgacgg
     3781 ccatacaacg atgctgttgg gtgcggcgaa atacctcgcc gagacgcgca acttcgatgg
     3841 cacggtttat ctggtgttcc agccggccga ggaatttgaa ggcggcgcag acaggatggt
     3901 gcaggacggg ctgtttaccc gttgcccgat ggagcagatc ttcggcctgc acaactggcc
     3961 gcagtcaccc gagggaacgt ttctgtggcg ctccggcgac gtcatggcgg ctgtcggttg
     4021 gatcgacatt acgatcaccg gcaaaggcag ccatggcgcg ttcccgcatc aaggggtcga
     4081 tccggtggtg gtggcgtcga cgatcgtgac cgcgctgcag acgatcgttt cgcggaacat
     4141 ggagccgatc cagggcgggg tggtttcgat cggccatatc tcgggcggcg atgcgtataa
     4201 catcttgcct gagcgcgtgg tcatgaaggg aacggctcgg tggttccgcc cgcaggtggg
     4261 agatatcatc gaagcgggcg tgcatcgtct ggccaccggg atcgctgcga gctttggcgc
     4321 aatcgccgaa gtgaagttca cccggcattg cccggctacg gttaatgatg aagatgcaac
     4381 agtgctcgcc gtggcggcgg cagagacgat ctccgggcgt gcgaaagtga agcacatgcc
     4441 aatgccgacc atgggcggcg aagattttgc ctatatgctg gagaagaaac agggcgctta
     4501 tctgatgttg ggcggcggcc gggggaaaga cgaaccgttg ctgcatcacc ctcggtatga
     4561 cttcaatgat gccattctgc cgattgggtc gtcgtggtat tcgacgttgg tggaacggca
     4621 tctggcgcgg aagaactgac ctggcgttac cgccgggcga tcagctggat gccaggcttt
     4681 tggttcggga aaaaccatag cgacttgaaa tgcggtttga gtgcatgcct gaggccggct
     4741 ttggtgaaca gggtcagatg ctcgggcggc ttgacggctt cccaggtgaa caactgacgg
     4801 cgcactgaaa aatgccctgc atcgggcgtc gacaggaaca ggatcccgcc gggcgtcaat
     4861 gcgcgggaca gcgactcaat gaatgcgttc gtatcgggaa catgttcgac gacttcggta
     4921 caatatacca tgtcgaacgc ctgggttgcg gcaacttcgt caagcgtgct gtgcaagaat
     4981 tggttgttcg gaaaattctc gcgagcaatt ctcaccgctt ccgggtttag ctcgatgccg
     5041 gttgcattga atccattcca tcgcgccgct tcgacagcac aaccaatgtt gcagccgacg
     5101 tccaggaagc gacgtccacg ggtcagccac ttcagcagga atatccggcg tttctcaagc
     5161 ccaagtttct ttgccatctt gccgacatgg actgcatcac cgtaatggct cgtgtagaaa
     5221 tcactgagtg cctcgatcgg gggtacctgg tctggaaaca acgtcccaca gttgtcgcaa
     5281 atcagcatct tatcaaatgc caggcgaggg tcggcgcaca tcatttcagc gaaagtctcg
     5341 cgcacatctg tggaatgttc gaactgacgc gaccagctct gccggtcaaa ctgcgctgtg
     5401 aggtgttccg aggcgcaggc cggacaaatg gtgcgtgttt gccgttcgct cgattgggac
     5461 tgcatgaaaa gcgcctcgat tcctgccggc tatgcgatcg tcgagatgta cccggcggcg
     5521 tcccggccta caagacactg cgaccggggc agtcgatcag gcacccaccc gtttgcggat
     5581 cgctgctgcc cgcttaagga cggtccgggc tcgctctacc acgggaacgt cgatcatcgc
     5641 gccttcgaac tgcacggcgc ccagtccgcg ggcgtaggca tcgtcgtagg cggcgaccat
     5701 ttgttcggcg cgcgcaactt cggccggtgg tggcgaaaac tcttcgttga ggaccggcac
     5761 ctgcagtggg tggatcgcac tggcgccgac gaacccgagc cgtcgggagc ggcgaacaat
     5821 ggcacggaat gcgtcctgat cgcggaaatc ggcgatcgat ccgacgaagc ccatcggcat
     5881 gacgccggca gcacgggcgg cgaacagcat gtgctgtttg ggatagaaca acgcctcagg
     5941 ttccgactgc atgccggcat cggcggcgaa atcctctgat cccaggctca gcgagacgat
     6001 gcgcggatgg catttggcga tctcctccat gcggaagaag ccgcgcgtgg tttccaccag
     6061 aaccgcgaac ttcaccgatc cggcgggcaa atttcgttct gcttcgagtt cgtcgacgat
     6121 ctcggcgacg gcgaggacat gctccggact gtcaactttg gtcagcatca gggcgcaaat
     6181 gcccgggatg actgcggcct cgacgtcgcg caccaacatc cgccatggcc ggttgacccg
     6241 caccagcacg tcggcgccat tgcgggacac ctgagggatg gcaccggcga tcagcgtgcg
     6301 ggcaaggtct ttctgcgacg gcgcaaccgc gtcctccaga tcgaggatga tgccatccgc
     6361 gccgcggtcc gctccggtgc ggacgaactt gtccacgttg accggaacga acatcagtga
     6421 acgccagaca ggcaaatcat cgcgcatggg ctttcctccg tggtccggac tttgcgatgg
     6481 gacagtgtgc ggcgggcgat ggccgggtca aggccagccg aatcaggcct ccttgatcac
     6541 gccatcgacg gccagagcat cgatccgtgc cgtgtcaaca ccaatggatt ccagaatgga
     6601 acgagaatgt tgccccagac cgggtgccgg caggcgaaac cgtccgggcg tgtcggacag
     6661 ccgtggaatg atgttatgca ttagcaccga tccggcgtcc gcgtccggcg cctcgaccag
     6721 cacgccgcgg ccgtggacat gcgggtcctc gagtaactgg tcgatttcat agaccggatt
     6781 ggcggtgact tcagcggctt cgaaaatcgc catgttctcg gccaacgtcc gagcggcgat
     6841 gaacgcgccc actgcctgat cgcaggtgtc gatgttgcgc acgcgatccg tattggtgcg
     6901 gaacctcggg tcgtcgatca tttccggttt gccgatagcg cggaacacgc gctccgccat
     6961 tgcctggatc gatgccgaga tcgcaatgaa gcggttgtcg ctggtttcgt aaacgttgcg
     7021 cggcgaggtg gtcagcgacc ggctgccggt ccgccgcggt ttctggccac tgaccttgta
     7081 aatcgccgca tccggtccca gcacggaaat catcggttcc aataaaggca aatcgatcac
     7141 ctggcctttg ccgccgcgct ccaccacccg caacgcaacc atgattgcat aagcgccata
     7201 aagtccggag atcatgtcag ccatcgccag cggcggcagc accggtggac gatcctcaaa
     7261 tccgttcttc gaggcaaagc cggacatcgc ctcaaccagt gtgccgaaac caggacgatc
     7321 ccgatagggc ccgtcctgac caaatccggt gatccggacg atgatcaatc gcggattgcg
     7381 ccgatgcagg acatccggac caaaccccat ttcctccagt gttccgggcc ggaagttctc
     7441 gatcaacaca tcggatttgg ccagcaggtc gtgcagcacg tcttttccgg cctggggacg
     7501 caaattcagc gcgagactct ttttgttgcg ggcatagacc ttccaatgta acgacaggcc
     7561 tttgacacgc caggcacgca acggatcgcc gaccgtcgga tcttcgatct tgatcacttc
     7621 agcgccctgg tcggcgagtt gcaaactcac catgttgcca gcaacaaggc gtgacaaatc
     7681 gacaacgcga agtccggcca gcggcaccgg ggctgcgggg tcgaattcaa cgcgtgggat
     7741 catatcagtc tctctcgccc gcaatcgcac tgagcaaacg taggtcttca caagccgatc
     7801 gcaaaagcgc cggaacatgg cccatgtctg cgacagacac tggtggcccg caaggcctga
     7861 aacaggaatt gctgaggggt ggaaacgcca tgtcggcggc gcagtgcatg tgctcggcgc
     7921 ccgcatcttc aatgccggct tcgaggcggt gcaactctgt cagactccgg gtcgccgatg
     7981 agcgctcgca tccgagtgcg ccggtcatcc gcgacggcga tgtttttcca atccggcccg
     8041 caaacgacag gcttgcattg ccccggtcgg ctgtgccagg atgcctcaat tgcgagtggt
     8101 tcgcatttgc acgacgggaa gcggccttat gttcgtcagt atgattattg tgttccggga
     8161 ggtcatggaa gccggcctaa ttgtcgggat agtcctggcc gcgaccaaag gcgtcccaca
     8221 gcgaggccgc tgggttgccg gcgggatcgc agccggggtg gccggcgcca gcctggtcgc
     8281 tgtgttcgcc accacattgt ttgacgcatt ccagggcgcc ggccaggaag tgtttaccgc
     8341 ggcaattctg ggttttgctg tggtgatgct gacgtggcac gtcggttgga tggcgcatca
     8401 cggacgcgaa atggcggccg aaatgcgcaa ggtcggtgag gcggtacggc tcggtcaccg
     8461 ctcgcttgcg gcgttggcgg ctgttgtcgc ggtcgcagtg atgcgcgagg gatccgaggt
     8521 cgttctgttc ctgtttggca ttgtcgccgg gtcgaacacg acgccgctgt cgctcgccgt
     8581 cggcggtgcc gccggacttg ctctggccag ccttgtttcc tggttgctgt atcgggggtt
     8641 ggtgatcatt ccgctgcacc ggctgttcac tgtgacaaac acattgattg ctctgctcgc
     8701 cgccggcatg gctgggcagg ccgccgcgac gttgcatgcc gccgatctgc tgcctggctg
     8761 gggcgagcaa tggtggaaca ccagcgccat cctggccgat gacagtttcc ttggccggag
     8821 cttgcatgca ttggttggct attccgcgcg gcccagtggc attcaactgg cggcgtggct
     8881 cggaacattg gcgatgatgg tgatactgtc gcatgtcgtg ggtcgcccta aggggggcaa
     8941 actggtgcgc cctttgtccg ccacggtgtt gttggtcggg ttgctggctg gtggaacgca
     9001 ggtccatgcc gaagatgccg ccgtgcaatt ggccttcacc cagcatcgct tcgtgccgga
     9061 tcgccttgtg gttccggcca atgtcaaatt ccgggtgatg gtgaagaaca acgacgacac
     9121 tgccgatgag ttcgagagcg ttgacctgaa tcgcgagaag ctggtgccat caggccagac
     9181 gatcaccgtg tttctcggcc cgctgtcgcc cggccaatac aaattctttg gcgacttcca
     9241 ccaggatacc gcgcaaggcg tgatggtggc caaatgacct acggaaaatt cgtgctggcc
     9301 gcggcgctgg tcatactggc gccggtgggg gcccacgccg acttccatgt ggtttcgccc
     9361 tatgaaatcg atcttggtga actggaaatc gaacacaacg gtgacgcggt gttcgatcgc
     9421 cggcccgacc agcgcggagc gacgagctac accaccgaac tgggcactgg tctgacctcg
     9481 tggtggcaca gcgaaattga gctcggcttc gatcgcgcgc ccggcgatgg tcaaccgacg
     9541 ctgctaacgc aagcggtttg ggaaaatatg attgagctta ccgaacccgg cgaacagttc
     9601 gccgatctcg gattttattt cgagtacggg caatcgacca cgaccggcca taacgccgca
     9661 tcaaatgaaa tcacgttcgg cccggttatc gccaaggata tcggccgaac cacacacacg
     9721 atcaatctgt ttttcacccg ccagttgggg ccggaccaaa ccagccaggg cctcgatttc
     9781 agctatgcat ggcagagccg ctggaatatc tgggctccgc tgtcgccggc gattgagata
     9841 tacggagaca ctggcacgct tggcagcgta ccgcggctgt cgcaacagga actgctcctc
     9901 ggcccggttg gggttgggcg gctgcagctg aacgaacttg gtctcggcca cgcgggcgtt
     9961 gtgaagtacg aaatcggctg gctgttcggc acaacgccgg cgaccgcccg cggcacgttg
    10021 cgctggcggt tggaggtgga gattccgttc tgacgcgccg gcacgaggtt acgctgtgtc
    10081 ctcccgggaa gccttacgaa tggaaggcga ccaaccctga catcggttcg ttacctgaca
    10141 acgaagcggc cccaggcaat ccaatcgtca ctgccgccgc accgtgcaac gaactcgagg
    10201 caaaggtgac attgaacata tcctccgccc tcacgttctg cgcgtccgtt gcgagcacca
    10261 gcagcccgat cgttccgctt gcgttggctg gaacagcacc ggaaagcgtg tcggtgctcg
    10321 cattgaagtg cagccatgag gtgacgttcg gaccgctcac ctcatacgcc gcgaaactca
    10381 ttttcaggcc cagggcgtct gtgaaagtgt tggccggcag caccaaagtc acattctgag
    10441 cgtcagtcca gatctggttc ggcgtcggat cggacacggt gatccccggc ctcggggtcg
    10501 gagccggcgc cggctgaata gtggcggtga aactttccga cgtggcgagg ccgctgctat
    10561 cggtcgccgt caccttgatg cccagggttt gcgcggtcga cggcgccgtg ccgctgaacg
    10621 tttcggtggt tgcattgaaa cggagccagg ctggcagcgc ctggccgttg gacagggtgg
    10681 ctgtgtaagc gagcttctcg ccttgcgggt ccgtgaagct gtttgccgcc agcgtcagag
    10741 aaaccgcctt gccctcggtc caggtctggc tagacgtttg cgccgtcacc agtggtgcac
    10801 ccagaatggt ggccgtgaac gagtcggttg ccgccaggtg gctggtatcg gttgcggtta
    10861 ccacaatgtt caaggtctgc gcggtggcag ggggagtgcc actgaacgta tcggtcgctg
    10921 cgttgaagac cagccatgac ggcagcgtct gaccgttcgc caattgagcg ccataggtca
    10981 gtgcctcatt ctgcggatcg gtaaaggcca ccgcgagtga aatcgccgtg ccgcccttcc
    11041 atgtttgagc tggagtttgc atctttagca ccggcgccga tgcagccgat ccagcgaccg
    11101 ccacgctcag cgccgtccaa tcgccccaat aagtgccatt ataagcgcgc acatccagcg
    11161 tgtcggtcgt cgcaaccgag ccggcaagca acgcgaccga gctcaacgac gcaacggtca
    11221 aagctgatgc ggccgaatgg tcgccgtaat cgatgccgtt gagcacgaga aaatcgccgg
    11281 tcgccgtgtc gtaaatctgc cattcggtaa ttgttctgct cgccgggtcc gtcgcactga
    11341 acagtggtcc caacgacagt gtcgcatgga atgcaatact gcacgatcct gtcgtgtcgg
    11401 ccacaatcgg tgtatccagc tcataaatca ccaccgatga ggccgcgaca cccgcccatt
    11461 cctgcgacgc gaggtgcggt gcctggatga tgatatcgct cgatgaaccg
//
LOCUS       DATAVD010000408         1603 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3388732, whole genome shotgun sequence.
ACCESSION   DATAVD010000408 DATAVD010000000
VERSION     DATAVD010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3388732"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(7..915)
                     /locus_tag="VHX39_07635"
     CDS             complement(7..915)
                     /locus_tag="VHX39_07635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991028.1"
                     /translation="MARSSRIERVIFLFRASGTVAYDAAKVMASMPDHGKPGEDVFAR
                     YCLLIAALLLPACIARADDSPPTQDQAMALLHAGKRREALHAFDAIIAANPPDPSQAL
                     YTASLIDLQNDDWRSAKSYVQRLIKLRPASFQAWELMVQIDQASGDHEDCDLAIESLR
                     SAWRDASDPQTRSQVSFVRDRIVGPKHTLIAQQTLDTGGDEILRFLFQPADEAGKARH
                     LIVVQSDGETNERWRENGTVPYGTVVYHLDTVETLASGQSVARPYKFYLEPPAYDEVR
                     AMVVTILAGTAKPLSGDADPFWAGPP"
     gene            1039..>1603
                     /locus_tag="VHX39_07640"
     CDS             1039..>1603
                     /locus_tag="VHX39_07640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991029.1"
                     /translation="MSRFVRLFATVVPILLLLATPGCAAAGPPGPTDTTQGWDAGGRA
                     AWYMTSQGSRLIPRSWLDNLEQPDNAGMFLDPAYIQTFRYLPNQAVAGETTDPTCPYD
                     TALPLGFTVDCQSDKDLTGTRLQWVSNQSDKAPWVGMNCSACHTTQMTYKGTVFRADG
                     GPSLADFQSFTAKLARVMHETAPDGPKF"
BASE COUNT          298 a          526 c          484 g          295 t
ORIGIN      
        1 ctgacgctac ggcgggccgg cccagaacgg atcggcatcg ccgctcagcg gcttggcggt
       61 ccccgccagg attgtgacga ccatggcgcg tacctcgtca taggcgggcg gctccagata
      121 gaatttgtac ggccgggcga ccgactggcc gctggcgagg gtctcgacgg tatcgaggtg
      181 atacaccacc gttccgtacg gcacggtgcc gttttcccgc caccgctcat tggtctcacc
      241 gtccgactgt acgacgatca ggtggcgtgc ttttccggcc tcgtcggccg gttggaacag
      301 aaagcgcagg atttcgtcgc cgccggtgtc cagcgtctgc tgcgcgatca acgtgtgctt
      361 cggtccaacg atacggtcgc gcacaaacga gacctgcgac cgggtttgcg gatccgacgc
      421 gtcacgccat gccgaccgaa gcgattcgat ggccagatca cagtcctcat gatcgcccga
      481 cgcctgatcg atctgcacca tcagttccca ggcctgaaac gaagccgggc gcagcttgat
      541 cagccgctgc acataggatt tggccgaccg ccagtcatcg ttctgcaaat caatcaaact
      601 tgcggtgtac agcgcctggc tcgggtcggg cggattggcc gcgatgatgg catcgaacgc
      661 gtgcaaagcc tcccgccgct tgccagcgtg cagcagcgcc atcgcctgat cctgggtcgg
      721 cggcgaatcg tcggcgcgcg cgatacaggc gggcagcagc aaggccgcga tcagcaggca
      781 atatcgagcg aacacgtctt ccccaggctt cccatggtcc ggcatcgacg ccatgacctt
      841 ggccgcgtca tacgcgacgg ttccgctggc gcgaaagaga aaaatcaccc gctcgatccg
      901 gcttgaccgg gccacgcgcc gtctgcccgt aatggaattt gttgcaagac cacatcatgc
      961 gcattacggt tgccagtaat gaccgatcaa ggtgagtgaa tctccactct tgggtcaaca
     1021 gtcgaaaaag ggaacgtcat gtcacgtttc gtccgcttat ttgcgactgt tgtcccaatt
     1081 ttacttctgc tggcgacccc cggatgcgcc gccgccggtc cgcccggacc aaccgacacg
     1141 acacagggct gggacgccgg cggccgagcg gcgtggtaca tgacgtcgca gggctcgcgg
     1201 ctgatcccac gctcctggct ggataatctc gagcagcccg acaacgccgg gatgttcctc
     1261 gatccggcct atattcagac gttccgctac ctgcccaatc aggccgtcgc cggtgagacg
     1321 acagacccga cctgccccta cgacacggcg ctgccgctgg gcttcaccgt cgattgccag
     1381 tccgacaagg atttgaccgg cacccggttg cagtgggtgt ccaaccagtc cgacaaggca
     1441 ccctgggtcg ggatgaattg ttcggcctgc cacacgaccc aaatgaccta caagggcacg
     1501 gtctttcgcg cggatggtgg cccctcgctg gccgattttc agtccttcac cgcgaaactg
     1561 gcccgggtga tgcatgagac cgcgccggat ggcccgaaat tcg
//
LOCUS       DATAVD010000409         1596 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1340430, whole genome shotgun sequence.
ACCESSION   DATAVD010000409 DATAVD010000000
VERSION     DATAVD010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1340430"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..191)
                     /locus_tag="VHX39_07645"
     CDS             complement(<1..191)
                     /locus_tag="VHX39_07645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991030.1"
                     /translation="MNGQSDFTVTLLGTGVPVPSPDRFGSSTLIEAGDQKLLIDAGRG
                     AAIRLFQLEIPLGRLDALL"
     gene            complement(188..1138)
                     /locus_tag="VHX39_07650"
     CDS             complement(188..1138)
                     /locus_tag="VHX39_07650"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX3991031.1"
                     /translation="MAVAALVFAAGAPADADSFPSRSIRVIVPASVSTPPDIITRIVA
                     NALSESEGWNVVVEDRPGAVQTLGAHEVLKQPADGYTILSVGVPLSAAQTLVPDIGFQ
                     LDSDFAPIVQLSESGNVLVVNPSVPVKSVAELVQYLKQNPDKLTYSSGGFGTPAHLIG
                     ELFKLQTGVRVTHVPYNDFPRAITDLLQGVNAYQFITVLPVLGFIKSGQLRALAVTPP
                     KRVPQLPDVPTLAEAGYPALTNFDWVGWSARAGTPPEVIGRVNAAVNKVLKMPKVIDA
                     FDKVGSQTVGGPPGQLGELVKSQVALWAKVVADAGLKLQQ"
     gene            1304..>1596
                     /locus_tag="VHX39_07655"
     CDS             1304..>1596
                     /locus_tag="VHX39_07655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991032.1"
                     /translation="MNHLPYWTLRCKAGALLVLMVLAAARPAAADDVADFYRGKSLTL
                     VISYTVGGGYDLYARVLAHTLGKYIPGHPTIVPENMPGAGGLRASNYLYNAAP"
BASE COUNT          319 a          511 c          473 g          293 t
ORIGIN      
        1 aacagcagcg catcgagccg ccccagcggt atctcgagct gaaacagtcg gatcgcggca
       61 ccacggccgg catcgatcag gagcttctgg tcgccggctt cgatgagcgt actcgagccg
      121 aaccgatccg ggctgggcac cggcacgccg gtgcccaaaa gtgtgaccgt aaaatcgctt
      181 tgtccgttca ttgctgcaac ttcagtcctg catctgcaac gaccttggcc cacagtgcga
      241 cctgcgattt gacgagctcg ccgagttgac cgggcgggcc gcccacggtc tgcgatccga
      301 ccttatcaaa ggcgtcgatg accttcggca tcttgagaac cttgttgact gccgcgttga
      361 cgcggccaat cacctccggc ggcgtgccgg ccctggcgga ccatccgacc caatcaaagt
      421 tcgtcagcgc gggataacct gcttccgcga gcgttggcac gtcaggcaat tgcggcacgc
      481 gtttcggcgg cgttacggcg agcgcacgca actgcccgga tttaatgaag ccgaggaccg
      541 gcagcacggt gatgaattgg taggcgttga ctccctgcaa caggtcggtg atggcgcgcg
      601 gaaaatcatt atacggaacg tgggttacgc gtacgccggt ttgcagcttg aatagttcgc
      661 cgatcaggtg cgcgggcgtt ccgaaaccac cggaagagta tgtcagttta tccggattct
      721 gcttcaggta ttgaaccaac tcggcgacgg acttgactgg caccgatgga ttcaccacca
      781 acacattccc cgactccgac aattggacga tcggcgcgaa atcgctatcg agctgaaaac
      841 caatatcggg caccagagtc tgcgcggcgc tcaacggcac gccaaccgag aggatcgtgt
      901 atccgtcggc gggctgcttg aggacctcgt gggcgccaag cgtctgcacg gcgcccggcc
      961 tatcctcaac caccacgttc cagccttcgc tctcgctcag ggcattcgcg acaatgcgag
     1021 tgatgatatc gggaggcgta ctgaccgaag caggcacaat gacgcgaatc gaccgggacg
     1081 ggaatgagtc ggcatccgcc ggagcgccag ccgcaaatac gagcgcggcc accgccatca
     1141 gtagccatat gcccctgcgg cagtcctgcg cctggatacg cctcattccg ccctccccga
     1201 ccgttgcctg ctgcgatgga ctatgcgcga catgtcgagc gatttccagc ggtcgcggag
     1261 tccgcttatg atgccatgtc gggactccag agttgagggc gacatgaacc accttccgta
     1321 ttggacactc cggtgtaagg caggcgcact cctcgtactc atggtgcttg ccgcagcgcg
     1381 accggcagcg gccgatgacg tcgccgactt ctaccgcggc aaaagcctta ccctggtgat
     1441 ctcctacacc gtgggcggcg gctacgacct ttacgcgcgg gtgcttgccc atacactcgg
     1501 aaagtacatt cccggccatc cgaccatcgt gccggaaaac atgcccggcg ccggcggcct
     1561 gcgggcgagc aactatcttt ataacgcagc cccgaa
//
LOCUS       DATAVD010000410         6098 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3015343, whole genome shotgun sequence.
ACCESSION   DATAVD010000410 DATAVD010000000
VERSION     DATAVD010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6098
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3015343"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1007
                     /locus_tag="VHX39_07660"
     CDS             <1..1007
                     /locus_tag="VHX39_07660"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX3991033.1"
                     /translation="VVGLDHRHVYDLTAGLLAAGAVCIGHDPETTDPRVLEGFRKRFP
                     DVPAVSRDRLLDDPSVGFVVLGSVPRDRAALAIEAMRHGKDVMVDKPGVTTPEQLTAV
                     EAAVSETGRIWSVSLGRLTSPSTQAALQVARSGELGRLISLTSLAPHRLNRALRPAWF
                     FEREAYGGIINDIGVHSIDLFLAFAEVTDATIAASTIGCFGTPPPGFEDFAEITLRSE
                     TMMGTMRLDWFTPDGLSDWGDGRLFLIGTEGTLELRKNLDIEGRAGGNHMFVSNGQRT
                     RYQNCSTLPVTYYHDFLEDVRDRTGRMLDSGRVFSTCRLALRCQAEAVRFIPGDIESV
                     "
     gene            complement(1016..2275)
                     /locus_tag="VHX39_07665"
     CDS             complement(1016..2275)
                     /locus_tag="VHX39_07665"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX3991034.1"
                     /translation="MSGVVVIGGGVVGIVSAIELLRGGHEVTIVEPGTPGGEQAASYG
                     NGTLLNPSSVVPMSSPGLWKKVPGFLLDPLGPLTIRWSYLPRLLPWLRRFVQAGSTAA
                     KVAATGRALQPLLANAPALHRALAEQAGVGDLITRHGVLFAFPDRSAFEAEALSWKVR
                     RDNGVKWLELDADELRQREPSLDRHYTFAVLIEENGQCRDPGAYVAALAAHAVAQGAE
                     IIRSGATGFRIEAGRLRAVTTRDGEVACDKAVIAAGAWSKVLAAAAGDKVILETERGY
                     HAVIADPGIEPRYPMMPSDGKMACVMTPAGLRLAGQVELAGLEAAPNWKRAEVLLAFA
                     RRVYPGLPADLPPERVKLWMGHRPSTPDGLPYLGLASGCADIVHAFGHGHVGLTAAAT
                     SGKVVAALVAGGKPPFDLAPYAVTRFR"
     gene            complement(2272..3081)
                     /locus_tag="VHX39_07670"
     CDS             complement(2272..3081)
                     /locus_tag="VHX39_07670"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3991035.1"
                     /translation="MTFSAASAPDSLLAIRDHYLGPSLLAPFADDMARRLSRISIGPL
                     LETSADTGVLTQAIASAVSVGLTIVATDPCLEMIEHASTKPGMARVNWQTADPHALPF
                     KDATFGIVTSHFSVASMPDRIQLFQEARRVMKQGGRFVFSVPGPLRHNPAADCLQHVM
                     EALFPTDPPGFVAHVFHGYSDNEAVDDDLTAAGFTDAIYTTVALPYAVASARDVAMGY
                     CRGTPLRMEIEARAPGETERVTQAATAALERRFGTGPINTTMRAHVVSAAG"
     gene            complement(3088..4668)
                     /locus_tag="VHX39_07675"
     CDS             complement(3088..4668)
                     /locus_tag="VHX39_07675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3991036.1"
                     /translation="MKRRNVLKGAAAVSAVLAAPRISRAEGPKTVNFAPQADLASIDP
                     VWTTADVTRNYSLAVFDTLYGYDAQFQVQPQMVEGHKVEDDGKTWELTLRDGLGFHDG
                     QKVLASDCVASIQRFAKRDPFGQALFKRVQEISAPSDSVIRFRLDKPFPLLRTALAQV
                     YCAIMPTRLAQTDPFKQIPEAIGSGPFKFVADERIPGSRTVFAKNAAYVPRKDGVASF
                     NAGPKIVNVDRVVWNFIPDPATASAALHQGEVDWWENPSLDLLPQIKTFKSIVVTVKD
                     RTGELGCLRFNQLHPPFDNAAIRRVVVAAMDQKEVMEGVAGAEPSLYKTDIGIFVPGT
                     PMASTAGVEVTRGPKDYAKLKKDLAAAGYNGEKIVVLAASNFPTIWAEAQVANDILTK
                     TGFNVDLQALDWGTVVQRRASREPVDKGGWNIFYTYLGGFGNISPAPNIAIRGNGTSA
                     WFGWPSNPKIEELYSSWFEAPDQATQQKICEAMQIAFWQNPTYAPLGMYDQPTAFQGY
                     MHDIHDGWPQFYGLKKAI"
     gene            complement(4739..5605)
                     /locus_tag="VHX39_07680"
     CDS             complement(4739..5605)
                     /locus_tag="VHX39_07680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3991037.1"
                     /translation="MAASPTSWIVDLTPLVASPGAATLPYFDPAFPDRQLILHAARPT
                     AWHPGLPVLFVHHGVARNGRDYRDYWLPHADTANILVIAIEFPEASFPEYLWYNFGNL
                     HAADGTPNPREQWTFGIDTRLFQALRDQGMTTTQRHGLFGHSAGGQYVHRMLSFGYRQ
                     HVAVAVSANAGTYAMPDLGVDWPWGLGATDVTRDDLCNLLAFPLTVMAGTADIKTTGR
                     FFPKGPSSLKQGATRHARAHTYVRIGREAAERLGITMAWTVIDVPDVGHDGRRMSDAA
                     APLIAAALHRAV"
     gene            complement(5727..5909)
                     /locus_tag="VHX39_07685"
     CDS             complement(5727..5909)
                     /locus_tag="VHX39_07685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991038.1"
                     /translation="MEFFEVRSDDTTTTGRSEKLTDYATLAFLRCQVLLEQISVGTTL
                     LIRDPVTPDRQRALRR"
BASE COUNT         1094 a         1879 c         2023 g         1102 t
ORIGIN      
        1 ctgtcgtcgg cctggatcat cgccacgtct acgatctgac ggctggtctg cttgctgccg
       61 gcgcagtctg tatcggccac gatccggaaa ccacggatcc gcgcgtgctg gaaggctttc
      121 gtaagcgctt tccagacgtg ccggcggtgt cgcgggaccg attgctcgac gatccatccg
      181 tcggctttgt cgtactgggt tcggtaccac gcgatcgggc cgcattagcg attgaggcga
      241 tgcgccatgg caaggacgtc atggtcgaca agcccggcgt gacgacgccg gagcaactga
      301 ccgctgtcga ggcggctgtg agcgaaaccg ggcggatctg gtcggtctcc ttgggccggt
      361 tgacctcgcc ttcgacacag gcggcgttgc aagtggctcg gtctggcgaa ctgggcaggc
      421 tgatcagcct gaccagcctg gcgccgcacc ggttgaaccg ggcgctgcgg cccgcttggt
      481 tctttgaacg ggaggcatat ggcgggatca tcaacgatat cggcgttcac tcgatcgatc
      541 tgttccttgc gtttgccgag gtgaccgatg cgacgatcgc tgcaagcaca attggatgtt
      601 tcggcacacc gccaccgggc ttcgaggatt ttgccgaaat caccctgcgc agcgaaacga
      661 tgatgggaac aatgcggctc gactggttca caccagatgg cctgtcggac tggggcgacg
      721 gacggctgtt tctgatcggg accgagggca cgctggaact gcggaaaaat ctggatatcg
      781 agggcagggc gggcggcaac cacatgttcg tatcgaacgg gcagcggacg cgttatcaga
      841 attgcagcac actgccggtg acttattacc acgatttcct tgaagacgtc cgggatcgca
      901 ccggccgcat gctggatagc ggacgggtct tttcgacctg ccggttggca ctccgatgcc
      961 aggcagaagc ggtgcgattc atcccaggtg atattgagtc agtttgaccc atgtgctacc
     1021 ggaaccgcgt cactgcgtat ggcgccagat cgaagggcgg tttccctccg gcgaccaggg
     1081 cggccacgac cttgcccgag gtcgcggctg ctgtcagtcc gacatggcca tgtccgaagg
     1141 catgcacgat atccgcgcac cctgacgcca ggccaaggta tggcagccca tccggtgtcg
     1201 agggccgatg gcccatccat agtttcaccc gttccggcgg cagatcagcc ggcagccccg
     1261 gatagaccct gcgcgcaaag gcaagcagaa cctcggctcg cttccagttc ggcgccgcct
     1321 ccagtcccgc cagttccacc tgtccagcca gccgcagtcc ggccggtgtc atgacgcatg
     1381 ccatctttcc atcgctcggc atcatcggat agcgcggctc gatccccgga tcggcgatca
     1441 cggcatggta tccgcgctcg gtttccaata tcaccttgtc gccggccgcc gcggccagca
     1501 ccttcgacca cgccccggca gctatcacgg ccttgtcgca cgcgacctcg ccgtcgcgcg
     1561 tggtcaccgc gcgcagccga ccggcctcaa tccggaaccc cgtcgcaccg gaccggatta
     1621 tttccgcccc ttgcgctacc gcgtgggcgg ccagagccgc gacataggca ccgggatcgc
     1681 ggcactggcc gttctcttcg atcaaaacgg cgaatgtata gtgccggtcc agcgacggtt
     1741 cacgctggcg caattcgtcg gcgtccagtt ccagccattt cacgccgttg tcgcggcgca
     1801 ctttccacga caaggcctcc gcttcgaacg ccgagcgatc ggggaaggca aacaggacgc
     1861 catgccgggt gatcagatcg cccacaccgg cttgctcggc aagcgcacga tgcagcgccg
     1921 gggcattcgc cagcagcggc tgcaaggcgc gtccggtggc agcgactttc gccgcggtgg
     1981 acccggcctg gacgaagcgc cgcagccagg gcagcaggcg tggcagatag gaccagcgta
     2041 tggtcagtgg acccagggga tccagcaaaa agccgggaac cttcttccat agccccggcg
     2101 aggacatcgg aacgaccgaa ctggggttga gcagtgtgcc gttgccgtag ctggcggcct
     2161 gttcgccgcc gggagtgccg ggttcaacga tggtgacctc atggccgccg cggagcagtt
     2221 caatggcgct gacgatgcca actacgccac cgccgatcac gacgacacca ctcatcccgc
     2281 ggcggacaca acatgcgcgc gcatggtggt gttgatcggg cccgtgccga accggcgctc
     2341 aagcgccgcc gtggccgcct gggtcactcg ttcggtctcg cccggcgcgc gcgcctcgat
     2401 ttccatccgg agcggcgtgc cacggcaata acccatcgcg acatcccgag cggacgccac
     2461 cgcatagggc agcgcgaccg tcgtgtagat ggcgtcggtg aaacccgcgg ccgtcaggtc
     2521 gtcatcgacc gcttcgttgt cggagtagcc atgaaacacg tgcgccacga acccgggcgg
     2581 gtcggttgga aacaatgcct ccatcacgtg ttgcaggcag tcggcggccg ggttgtggcg
     2641 cagaggcccc ggcacgctga aaacgaagcg gccaccttgc ttcatgaccc tcctggcttc
     2701 ctggaacaat tggatgcggt cgggcatgct ggcgacgctg aagtgcgagg tcacgatgcc
     2761 gaacgtcgca tccttgaatg gcagggcatg cggatcggcc gtctgccagt tgacccgcgc
     2821 catgcccggc ttggtcgagg catgctcgat catttcgagg cacggatcgg tggcgacgat
     2881 ggtcagcccg accgacactg cggatgcgat cgcctgagtg agcacgccgg tatcggccga
     2941 cgtttccagc agcggcccga tactgatgcg ggacagccgc cgcgccatgt catccgcgaa
     3001 cggcgcgagc aggcttggcc cgagatagtg gtctcggatc gccagcagcg agtcgggagc
     3061 agacgcagcg gaaaacgtca tgggcggcta aattgccttc ttcaacccat agaactgtgg
     3121 ccagccatcg tggatgtcat gcatgtagcc ctggaatgcc gtcggctgat cgtacatccc
     3181 gagcggagcg taggtaggat tttgccagaa cgcaatttgc atcgcctcgc aaattttctg
     3241 ctgcgtcgcc tgatccggtg cctcgaacca ggaactgtaa agttcctcga tcttggggtt
     3301 ggacggccag ccgaaccaag ccgatgtacc attgccccgg atcgcgatat tcggcgcggg
     3361 ggagatgtta ccaaagccgc cgagatacgt gtagaaaatg ttccagccgc ccttgtcgac
     3421 cggttcacgg ctggcgcggc gctgcacgac cgttccccag tcgagcgcct gcagatcgac
     3481 gttgaagccg gtcttggtca ggatatcatt ggcgacctgc gcctcggccc agatggtcgg
     3541 aaaattggaa gcggcgagga cgacgatctt ctcaccgttg tacccagccg cggccaggtc
     3601 cttcttcagc ttggcataat ccttggggcc gcgggtaact tcgactccgg cggtgctcgc
     3661 catcggcgtt cccggcacga aaatgccgat gtcagttttg tagagtgacg gttccgcgcc
     3721 ggccacgcct tccatgacct ctttctggtc catcgcggca acgaccacgc ggcggatcgc
     3781 ggcattatca aacggcggat gcaactggtt gaaccgtagg cagcccagtt ctccggtgcg
     3841 gtccttcact gtgaccacga tgctcttgaa ggtcttgatc tgcggcaaca ggtccagcga
     3901 ggggttttcc caccagtcaa cctcgccctg atgcaaggcg gcggatgccg tggcggggtc
     3961 gggaatgaaa ttccatacga cccgatcgac gttgacgatc ttcggaccgg cattgaagct
     4021 cgcgactccg tccttgcgcg gcacataggc ggcgttcttg gcgaacacgg tgcgggaacc
     4081 gggaatgcgc tcatcggcca cgaacttgaa cggaccgctg ccgatcgcct ccgggatctg
     4141 cttgaacggg tcggtttgcg ccagccgcgt cggcatgatg gcgcaataaa cctgggccaa
     4201 ggcggtgcgc agcagcggga atggcttgtc gaggcggaag cggatcaccg agtcggacgg
     4261 ggcggagatc tcctgcaccc gcttgaacag ggcctggccg aatggatcgc gcttggcgaa
     4321 gcgctggatg ctggcgacgc agtcgctagc caggaccttt tgtccgtcgt ggaaacccag
     4381 cccgtcacgt agcgtcagtt cccaggtctt gccgtcgtcc tcgaccttgt ggccctcgac
     4441 catctggggc tgcacctgga actgggcatc gtagccatac agcgtatcga acaccgccag
     4501 cgagtagttg cgggtgacat cggcggtggt ccagaccgga tcgatcgacg ccaagtcggc
     4561 ctgcggggcg aaatttaccg ttttcggccc ttccgcgcgg ctgatccgcg gcgcggcgag
     4621 tacggcggag accgcggcag cgcccttgag tacgttccgt cgcttcatcc gttcaggccc
     4681 ccgtgttttt taggtttggg aggttaggcc gtaaaccggt accaatccaa ggggggcatc
     4741 acacggcgcg gtgaagcgcc gcagcgatca gtggcgcggc ggcgtcggac atgcgccgtc
     4801 cgtcatgccc gacatccggc acatcgatga cggtccaggc catcgtgatg ccgagacgct
     4861 ctgccgcctc ccgtccgatg cgtacataag tatgtgccct tgcatgccgc gtcgcgccct
     4921 gtttcagcga actcgggccc ttggggaaga agcggccggt ggttttgatg tcggcggtgc
     4981 cggccatgac ggtcagcggg aaggccagca ggttgcacaa gtcgtcacgg gtgacatccg
     5041 tggccccgag gccccaaggc caatcgaccc cgaggtctgg catcgcatag gtgcccgcgt
     5101 tggcgctgac cgcgacggcc acgtgctgac gatagccgaa cgacagcatc cgatggacgt
     5161 attgcccgcc ggccgaatga ccgaacagac cgtggcgctg ggtggtagtc atcccctggt
     5221 cccgcagggc ctggaacagc cgtgtgtcga tgccaaatgt ccattgctcg cgcgggttgg
     5281 gggtaccgtc ggcggcgtgc aggttgccga aattgtacca gaggtattcc ggaaaactgg
     5341 cttcgggaaa ctcgatggcg atgacgagaa tgttggcggt gtcggcgtgc ggcagccagt
     5401 agtcgcggta gtcgcggcca ttgcgggcca cgccgtggtg gacgaacagg acgggcaggc
     5461 cagggtgcca agctgtgggg cgggcggcgt ggaggatcaa ctgtcgatct gggaacgcgg
     5521 ggtcgaaata gggcaaggtt gcggcgccgg gcgaggcgac cagcggcgtg agatcaacta
     5581 tccatgatgt gggcgaggcg gccatgcggc atcgtaggct tgtcggggcg gatcgcaaga
     5641 aatctggtgc tggccttggt tgggaggcta ggccccgaca gaatgcggcg agcggcagca
     5701 cgatctcgag gccgggcaaa agcaggtcac cgtcgaagtg cgcgctgacg gtcaggggtg
     5761 actggatcac ggatcaacag cgtggtgcca accgagatct gctccaagag cacctggcag
     5821 cgcaggaagg ccagcgtggc atagtcagtc agtttctcgg agcggccggt ggtggtggtg
     5881 tcgtccgacc gcacctcaaa gaattccatt gcgttggtat ggagcggttt gtctggtcga
     5941 gggaatcggc gcagcccagg acttccaaag agcggacgcg cgtgcccgcg cgacgcggca
     6001 tcttgtgcac agttctgatc ggacggtcgg ccggcagcgg tccggtagca tccgcaagct
     6061 gaaggcgatg tcctaatggg cgaggctacc gccggtca
//
LOCUS       DATAVD010000411         3398 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1340810, whole genome shotgun sequence.
ACCESSION   DATAVD010000411 DATAVD010000000
VERSION     DATAVD010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3398
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1340810"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /locus_tag="VHX39_07690"
     CDS             <1..375
                     /locus_tag="VHX39_07690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEX3991039.1"
                     /translation="ADVVFAVVGEEFGLIVCLLLVSVFAFIVLRGLLRLMREQDLFVV
                     FAGAGLLSGFGLQTMVNLFSTLGMMPTKGMTLPLISYGGSSAVAVGLGMGMLLSMTRA
                     RARDERTRESRLPDAMVLREAA"
     gene            458..1696
                     /gene="murG"
                     /locus_tag="VHX39_07695"
     CDS             458..1696
                     /gene="murG"
                     /locus_tag="VHX39_07695"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEX3991040.1"
                     /translation="MRGPEVRPIVIAAGGTGGHFYPAEALAAVLVRRGHWVVLMTDAR
                     TVIARGSVFDARNQYVVPAAGIAGRGAARAGKAIFSLAAGVARARGILARIRPAAVIA
                     FGGYPAIPPVLASRLVRCRPPVILHEQNAVLGRANRFLARHARVLALSFAETSRVPPK
                     VNRLVTGNPVRPAVAALSEAAYEPPPGPKHDGSILGGSIRILVLGGSLGARVFSEIVP
                     SAIARLPDAIRARLMIIQQCRAEDLEQVRATYAAKGVSAELATFFADVADRLNAAHLV
                     IARAGASTVAELAVAGRPSILVPLPGAIDDHQSANARALADAGGSWVMPQSGFTVDAL
                     AERLTSLLSDSASLAQGAMHARLVARVGAADALADLVEQVMRETAPAPIEPASAAPLR
                     GQSGRPKTTRAGEQPRMGQS"
     gene            1693..3126
                     /gene="murC"
                     /locus_tag="VHX39_07700"
     CDS             1693..3126
                     /gene="murC"
                     /locus_tag="VHX39_07700"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006558221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEX3991041.1"
                     /translation="MRALPLSIGRIHFVGIGGIGMSGIAEVLHTLGYSVQGSDLSDSA
                     NVYRLREAGIPVTIGHEAANLGDARVVVVSTAVKRDNPEVAAARARLIPVVRRAEMLA
                     ELMRLKWSIAVSGSHGKTTTTSLIACMLEAAHLDPTVINGGIINASGTNTRMGDSDWM
                     VVEADESDGSFLRLPAVIAVVTNMDPEHLDYWGTPEAMIAGFDQFVANIPFYGFAVLC
                     IDHPAVQQMIPRMSDRRIVTYGFSPQADVRADKVRPDKSGSTFEVVVTDRARNRERRM
                     GPFRLPMLGEHNVQNALAAIAVGVEMEISDTVLRDAFLGFKGVSRRFTKTGEAGGITV
                     IDDYGHHPVEIAAVLKAARQAGARDVVAVVQPHRFTRLQSLFNDFCACVNDAGTVIVA
                     DVYAAGEAPIQGIDRDALVEGMRARGHRSVVPLPAPARLAEMVHAIAKPGDFVVCLGA
                     GSITQWAAALPAQLAELQANSRRGVGT"
     gene            3123..>3398
                     /locus_tag="VHX39_07705"
     CDS             3123..>3398
                     /locus_tag="VHX39_07705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylenolpyruvoylglucosamine reductase"
                     /protein_id="HEX3991042.1"
                     /translation="MTAAARVDLPPEDLGLPPIRGRIQADTPLAPFTWFRAGGHAEFL
                     VRPADAADLATLLRALPSTTPVQVIGAASNLIVRDGGLPGVTIRLARG"
BASE COUNT          549 a         1076 c         1101 g          672 t
ORIGIN      
        1 gccgacgtcg tctttgccgt ggttggcgag gagttcggcc tcatcgtgtg tctgctgctg
       61 gtcagcgtgt ttgctttcat cgtcctgcgt ggcctgctgc gtttgatgcg agagcaagat
      121 ctgttcgtcg tgttcgcggg agcagggcta ctctccggct tcggattgca gacgatggtc
      181 aatctgtttt cgactcttgg catgatgccg accaagggaa tgacactccc attgatctcg
      241 tacggcggct cctcagcggt cgctgtgggt ctgggtatgg gaatgttgct gtcgatgacc
      301 cgggccagag ccagggacga gcgcacgcgg gaaagccgct tgcccgatgc gatggtactc
      361 cgggaggccg catgaccaga cccagcacca tgccccggtt catccgcatt ggcgcgaccc
      421 ttggtcggac acagcgtctg ccagaaaggc acctgtcatg agaggcccgg aagtgcgtcc
      481 gatcgttatc gctgctggcg gaacaggcgg gcatttttac ccggccgagg cgctcgctgc
      541 cgtgttggtc cggcgcggac attgggttgt tctgatgaca gacgctcgca ccgtcatcgc
      601 acggggaagc gtgttcgatg cgcgcaatca atatgtggtg ccggccgcgg gtatcgcagg
      661 acgcggtgcc gcgcgtgccg gcaaagccat attctcactt gccgcgggag tggcgcgagc
      721 gcgcggcatc ctggcccgca ttcggcccgc cgcggtaatt gcattcggcg gttatccggc
      781 cattccgccg gtccttgcct ctcgcctggt acgctgccgt ccgccggtca tcctgcatga
      841 acaaaacgca gtgcttggcc gggccaatcg atttctggcg cggcacgccc gtgttcttgc
      901 actcagtttt gccgagacca gccgggtgcc gcccaaggtc aaccgcctgg tgacaggcaa
      961 tccggttcgg cctgccgtgg cagcattgtc cgaggccgcc tatgaaccgc cgcccggccc
     1021 aaaacacgac ggatcgatcc tcggcggctc catccggatt ttggtattgg gcggctcgct
     1081 tggcgcgcgc gtcttcagcg aaatcgtccc ttccgccatc gcgcgtttgc ccgacgccat
     1141 tcgggccagg ctgatgatca tccagcaatg ccgcgccgaa gacctggagc aggttcgggc
     1201 aacctatgcc gccaaagggg tcagtgcaga attggcgacg tttttcgccg acgtcgcaga
     1261 ccggctgaat gccgcgcatc tggtgatcgc tcgcgcggga gcctctactg ttgcggagct
     1321 tgccgtcgcc gggcggccct cgatcctggt gccgctgccc ggcgcgatcg atgaccatca
     1381 gagcgccaat gcaagggcgt tggctgacgc cggtggctca tgggtcatgc cgcagtcagg
     1441 tttcacggtc gatgctttgg cggaacggct gaccagcctg ttgtcagact cggcgtcgtt
     1501 ggcccaaggc gcgatgcacg cgaggctggt ggcgagggtc ggggccgcag atgctcttgc
     1561 cgacctggtg gaacaagtga tgcgcgagac agcgcctgcg ccgatcgaac cagcgtctgc
     1621 cgcaccgtta cgcgggcaat ccggacgacc aaaaaccaca cgagccggcg aacagcccag
     1681 gatgggacag tcatgagggc gctgccactc tcgattgggc ggatccactt cgtcgggatc
     1741 ggcggtattg gcatgtcggg catcgccgag gtgctgcata cgcttggcta ttccgtgcag
     1801 ggctccgacc tctccgacag tgccaatgtc taccggctgc gcgaggccgg catcccggtg
     1861 acgatcggtc acgaggccgc caatctgggg gatgctcgcg tggtcgtggt ttccaccgcc
     1921 gtgaaacgcg acaatcccga ggtcgccgcc gctcgcgccc gactcattcc ggtggtccgc
     1981 cgtgccgaga tgctggccga gttgatgcgg ctgaaatggt ccatcgcggt cagcggctcg
     2041 cacggcaaga ccaccaccac cagcctcatc gcttgtatgc tggaggcggc ccatctcgac
     2101 cctaccgtga tcaatggcgg gatcatcaac gcctccggca ccaatacccg tatgggcgac
     2161 agcgactgga tggtcgttga ggcggatgag agcgacggca gtttcctgcg cctgcccgcg
     2221 gtcatcgctg tggtcaccaa catggacccc gaacacctcg attattgggg tacacccgag
     2281 gcaatgatcg ccggcttcga ccagtttgtc gccaatatcc cgttctacgg cttcgccgtg
     2341 ctgtgcatcg accacccggc ggtgcagcag atgatccctc ggatgtcgga tcgtcggatc
     2401 gttacctacg gcttttcacc gcaggccgat gtgcgtgccg acaaggtgcg cccggacaaa
     2461 tccggctcaa catttgaggt cgtggtgacc gatcgcgctc gcaaccgcga gcggcgcatg
     2521 ggtccgttcc gcctgccgat gctgggcgag cacaacgtac aaaacgccct ggccgcgatt
     2581 gccgttggtg tcgagatgga gatcagcgac actgttctgc gtgacgcgtt cctgggcttt
     2641 aagggggtca gtcgccgttt caccaaaaca ggtgaggcag gtggtatcac cgtcatcgac
     2701 gactatggcc accatccggt agaaatcgca gcggtgctca aagccgcccg tcaggctggc
     2761 gcgcgagacg ttgtcgcggt cgtgcaaccc caccgtttca cgcggctgca atcgttgttc
     2821 aatgatttct gcgcctgtgt gaacgacgcc gggaccgtga ttgtcgccga cgtctatgcg
     2881 gcgggcgagg caccgatcca aggtatcgac cgcgacgcgt tggttgaggg catgcgtgct
     2941 cgcggtcacc gcagcgtcgt tccgttgccg gcaccagccc gtctcgccga gatggtgcat
     3001 gccatcgcga aaccaggcga ttttgtcgtc tgtttgggtg ctggttcgat cacgcaatgg
     3061 gccgcagcac ttcccgccca actggcggag ttgcaggcaa attcccgacg tggagttggc
     3121 acatgacagc cgccgcgcgt gtcgatttgc ctccggaaga cctgggcttg ccgccgatcc
     3181 gcggtcgcat ccaggccgat acgccgctgg ccccgttcac ctggtttcgc gcaggcggac
     3241 acgccgagtt cctcgtccgg ccggccgacg ctgcggacct tgccacattg ttgcgggcgt
     3301 tgccttcaac caccccggtg caggtgatcg gcgcagcgtc caatctgatc gttcgagacg
     3361 gcggtctgcc tggtgtaacg atccgcctcg cacgcggc
//
LOCUS       DATAVD010000412         5046 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3202942, whole genome shotgun sequence.
ACCESSION   DATAVD010000412 DATAVD010000000
VERSION     DATAVD010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5046
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3202942"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..553
                     /locus_tag="VHX39_07710"
     CDS             <1..553
                     /locus_tag="VHX39_07710"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEX3991043.1"
                     /translation="LVIDHGMGVVIGETAEIGDDCYFYHQVTLGVARTGSGKRHPTVG
                     NNVIIGAGAKVLGPITIGDNARIGSNAVVVDSVPPDTTVVGVPARPVDRKLPRRSAGT
                     AADFDPYGMPCDDSLDPLLRDLEGLRAELTEVEARVARIQAAQGEFGASESDVALFDG
                     NDGNRNGGGQRQPAQSQSQPAAE"
     gene            557..1042
                     /locus_tag="VHX39_07715"
     CDS             557..1042
                     /locus_tag="VHX39_07715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEX3991044.1"
                     /translation="MQLSTRGRYAVMAMADLASRQSLGCECGPVCLAEIAASQQLSLS
                     YLEQLFARLRRAGLVASSRGPGGGYRLARDSDRISIAAIIAAVDEPIRATRCNETSGP
                     CLALPGQMTERCQTHDLWAELGRQIGLFLGGVTLADVVLGQVRGRALAPTRGFARVSA
                     E"
     gene            1059..2156
                     /locus_tag="VHX39_07720"
     CDS             1059..2156
                     /locus_tag="VHX39_07720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019085135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX3991045.1"
                     /translation="MHYLDANASEPLRPEARVAMQATFEVTGNPSSVHAAGRAARRIL
                     EDARERIAGRFGVRDQDVVFTSGGTEADALAVHALRPGRRVMLCATEHDAIRAAAPDA
                     SVLPVDCNGIADLEVLRRWLSSGPMALVCLMLANNETGVIQPIAEAARLCREHDALLH
                     VDAVQAAGRIPVDMTDLGCHSVALSAHKLGGPAGVGALMLASELTAITPLIAGGGQER
                     GRRGGTPALGAVAGFAAVCDRVADQSRLAALRDRVEAAAVHHGAIVCGGGAERLANTT
                     SLALPAVRADAQVIALDLDGIAVSAGAACSSGKVQTSHVLTAMGLGCLAGQAIRVSLP
                     WNVEVEAVEAFEAAYARMAARFRAGLVATAA"
     gene            2193..3392
                     /locus_tag="VHX39_07725"
     CDS             2193..3392
                     /locus_tag="VHX39_07725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX3991046.1"
                     /translation="MTNDPARPNRPVYLDNQATTRCDPRVLAAMLPWFTEQYGNPHSS
                     EHIMGRIAEAAVETARGQVASLLGADTREVVFTSGATESNNIAIKGAARFAARYGTGD
                     RRRIVTVATEHKCVLESVGDLKDEGFEPVFLPVGSDGLVDPDVLRDALAVPTLLVSVM
                     AVNNEIGVVQDIPGLARLAKEAGALFHCDLAQAVGKIPLDLTGWKVDLASVSGHKIYG
                     PKGIGVLFVRRRPRARVLPLFSGGGQERGYRSGTLPAPLVVGLGEACRLAAAEMAEDN
                     ARIGALRDRLFAALHDHIPGIVINGSSAHRIAGNLNVTFPTETALAMLERMPDLCLST
                     GSACSSAAVEPSYVLRALGLSDEAAARTLRIGIGRFTSPADIDYAASALAAAHSGRHA
                     ADHFAKA"
     gene            3398..3730
                     /locus_tag="VHX39_07730"
     CDS             3398..3730
                     /locus_tag="VHX39_07730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family 2Fe-2S iron-sulfur cluster
                     binding protein"
                     /protein_id="HEX3991047.1"
                     /translation="MPKMTFIERDGTRREVDAPAGLSVLEIAHKHKVDIEGACEGSLA
                     CSTCHVLVDPGWYKKLSKATEDEEDMLDLAFGLTETSRLGCQIIMSDALDGLVVTLPA
                     GVNNMFKG"
     gene            3730..4800
                     /gene="mnmA"
                     /locus_tag="VHX39_07735"
     CDS             3730..4800
                     /gene="mnmA"
                     /locus_tag="VHX39_07735"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010515076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEX3991048.1"
                     /translation="MRVLVAMSGGVDSSVVAGLLHEQGHEVVGVTLQLYDHGVASGRK
                     GACCAGQDIHDARRVADRLGIAHYVIDAQARFSQAVIADFADSYAAGETPVPCIRCNQ
                     SVKFADLTALATGLGAERLATGHYVRRVDGPDGPELHRSADPERDQSWFLFATTLAQL
                     QQCWFPLGGMPDKRAVRDVAARLGLAIAEKPDSQDICFVPSGSYTEVVARLRPDALEA
                     GEIVAQDGSVVGRHDGVARFTVGQSKRLGAAAMAGGERQMVVATEPGTRRVVVGPRTV
                     STDQVRLRDVNWLVSPIAGPVRCTVKLRARDTLRPAVVEACAEGTTVRLDDPALPAPG
                     QACVFYDGDRVLGGGFITRMAN"
     gene            complement(4781..>5046)
                     /locus_tag="VHX39_07740"
     CDS             complement(4781..>5046)
                     /locus_tag="VHX39_07740"
                     /inference="COORDINATES: protein motif:HMM:NF025292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipocalin-like domain-containing protein"
                     /protein_id="HEX3991049.1"
                     /translation="DAARATMFNETIAYSGQVRMQSPGSFVTKVEMSLFPEEIGTEKL
                     RLFAIDGDRLTITRPEQTSRVTKGRRAVSNLVWQRESVSSPSA"
BASE COUNT          844 a         1513 c         1705 g          984 t
ORIGIN      
        1 tctcgtcatc gatcacggca tgggtgtcgt gatcggtgaa accgctgaga ttggcgacga
       61 ctgttatttt tatcaccagg tcactttggg cgtggcgcgc accggcagcg gcaaacgcca
      121 tccgaccgtc ggcaacaatg tcatcatcgg cgccggcgcc aaagtcctcg gaccaattac
      181 aattggtgat aatgcccgaa ttgggtcaaa tgccgttgtc gttgactccg ttccacctga
      241 taccaccgtc gtcggcgtcc ccgcccgtcc ggtcgatcgc aagttgccac gccgatcagc
      301 cggtacagca gcggatttcg atccctacgg gatgccgtgc gacgacagcc tggatccgtt
      361 gttacgcgat cttgaagggc tgcgtgccga actgaccgag gtcgaggcac gcgttgcgcg
      421 catccaggcc gcccagggtg agtttggtgc cagcgagtcg gatgtcgcat tattcgatgg
      481 caacgatgga aatcgtaacg gcggcgggca acgccagcct gcgcaatcgc aaagccagcc
      541 ggcggcggag tgaaacatgc aactttcgac acgtggccgc tacgcggtca tggcgatggc
      601 cgatctggcg tctcgccaat cgcttggttg tgaatgcggc ccggtttgcc tcgctgagat
      661 cgctgcaagc cagcaactaa gtttgtcgta cctggaacaa ttgtttgcca ggttgcggcg
      721 tgccggtctg gtcgcctcgt cgcgcggacc tggcggcggg taccggctgg cgcgcgactc
      781 cgaccggatt tccatcgccg ccattatcgc cgccgtcgac gagccgatcc gtgccacacg
      841 atgcaacgaa acctccggcc cgtgtctcgc actgcccggc caaatgaccg aacgttgtca
      901 aacccacgat ctatgggctg aactcggtcg ccaaatcggt ttgtttctgg gcggggtgac
      961 attggccgat gtcgtcctcg gccaggtgcg cggccgcgca ctcgcgccaa cgcgcggttt
     1021 cgcccgcgtg tcggcagaat aggtcacatc ggaattccat gcattacctc gatgccaacg
     1081 ccagcgagcc acttcgcccc gaggcaaggg tcgcgatgca ggcgacgttc gaggtaacgg
     1141 gcaatccgtc ctcggttcac gccgccggcc gcgctgccag gagaattctg gaggacgcgc
     1201 gcgagcgaat cgccggtcgt tttggcgtgc gcgaccagga cgtcgtgttc acatcggggg
     1261 gcaccgaggc tgacgcgctt gcggtgcatg cattaaggcc aggccggcgg gtcatgctat
     1321 gcgcaaccga acatgacgcg atccgagccg cggcgccgga tgcttcggtg ctgccggtcg
     1381 attgtaacgg catcgctgac ctggaggttt tgcgccgctg gctgagttcc gggccgatgg
     1441 ctctggtctg cctgatgctc gccaataacg agaccggcgt catccagcca atcgctgagg
     1501 cagcccggct gtgccgagaa cacgatgcct tgttgcatgt cgatgcggtg caggccgccg
     1561 gccgcattcc ggtcgatatg acggatcttg gttgtcattc cgtcgctttg tccgcgcaca
     1621 aacttggcgg cccggccggt gtgggtgcgt tgatgttggc gtccgaactg actgccatca
     1681 ccccgttgat tgctggtggt ggacaggagc gtggccgccg tggtggcacg cccgccctgg
     1741 gtgccgttgc cggcttcgct gccgtctgtg acagggttgc cgaccagagt cggcttgctg
     1801 cgttgcggga tcgtgtggag gccgctgcgg tgcaccatgg agcaattgtc tgcggcgggg
     1861 gggctgaacg tctcgccaac acaacctcgc tcgcgctgcc ggctgtgcgg gccgatgcgc
     1921 aggttatcgc tttggacctc gacgggattg ccgtcagtgc cggtgccgca tgcagttctg
     1981 gaaaggtcca gaccagccac gtgctgaccg ccatgggtct gggctgcctc gccggccagg
     2041 caattcgcgt ctcgctgccg tggaacgtcg aggtcgaggc ggtcgaggcg ttcgaggctg
     2101 cctatgcgcg catggccgct cgttttcggg cgggtctggt cgcaacggcg gcgtgacacc
     2161 atagagtaaa ggtgtgaccg aagagtaaat ccatgaccaa cgatcctgct cgcccgaacc
     2221 ggccggttta cctggataat caggcaacga cccgatgtga ccccagagtc ctggccgcca
     2281 tgctgccctg gttcaccgag cagtacggca acccgcacag ctccgaacac atcatgggcc
     2341 ggatcgccga ggcagccgtc gaaaccgcgc gcggccaggt tgcgtcgttg ctcggggctg
     2401 acacccgcga ggtcgtgttc acctccggcg cgaccgagag caacaatatc gccatcaaag
     2461 gcgccgcccg ttttgccgcg cgctacggca ccggtgaccg ccggcggata gtgaccgtcg
     2521 ctaccgaaca caagtgcgta ctggagtcgg tcggcgacct gaaagacgaa ggtttcgaac
     2581 cggtgtttct gccggtcggc tccgacggcc tggtggatcc ggacgtgttg cgcgacgcgt
     2641 tggccgtccc gacattgctg gtctcggtca tggccgtgaa caatgaaatc ggtgtggtgc
     2701 aggatattcc tggcctcgcg cgcctggcca aagaggcggg ggcgttgttc cattgcgacc
     2761 tcgcacaggc ggtcggaaaa atcccgttgg atctgaccgg gtggaaggtc gacctcgcct
     2821 cggtcagtgg tcataaaatt tacggcccga aggggatcgg cgtgctgttc gtgcgacgcc
     2881 ggcccagggc gagggtgttg ccgctgtttt cggggggtgg gcaggagagg ggttatcgct
     2941 cgggcacgtt gccggcgccg cttgtcgtcg ggttgggtga ggcgtgccgg ctggcggcgg
     3001 cggaaatggc cgaggacaac gcgcggattg gcgccttgcg cgaccgcctg ttcgccgcat
     3061 tgcatgatca tattcccggg atcgtcatca acggcagcag cgcgcaccgc atcgccggca
     3121 acctgaatgt gaccttcccg accgagaccg cactggcgat gctggagcgt atgccggacc
     3181 tgtgtctctc gaccgggtcc gcctgttcct ccgccgcggt tgagccatcc tatgtgctgc
     3241 gggcgcttgg gctttcggac gaggcggcgg cccggacctt gcgcatcggg atcggacgct
     3301 ttacctcgcc cgccgatatc gactacgcgg cgtccgctct ggcggcggcc cactctgggc
     3361 gacacgccgc ggatcacttc gccaaggcct gaacacgatg ccgaaaatga cgttcatcga
     3421 gcgcgacgga acgcgccgcg aggtcgacgc gcccgccggc ctgtcggtgc tggaaatcgc
     3481 gcacaagcat aaagtggata ttgaaggcgc ctgcgaaggt tcgctcgcct gttcgacctg
     3541 tcacgtgctc gtcgatccgg gctggtacaa aaaactcagc aaggcgaccg aggatgagga
     3601 ggacatgctg gacctcgcgt tcggcctgac cgagacctcg cggcttggtt gccagatcat
     3661 catgagcgac gcgttggacg gtctggtggt gacgttgccg gcgggcgtca acaacatgtt
     3721 caagggttga tgcgcgtcct ggttgccatg tcgggcgggg tcgacagcag cgtcgtcgcc
     3781 ggcctgttgc acgagcaagg ccacgaagtg gtcggtgtga cattgcaact atacgatcac
     3841 ggcgttgctt ccgggcggaa aggcgcgtgt tgcgctggtc aggatatcca tgatgcaagg
     3901 cgggtcgccg atcggttggg gattgcgcat tatgtcattg acgcacaggc gcgattttcg
     3961 caggcagtga ttgccgactt tgccgacagc tacgcggcgg gcgaaacgcc ggtgccgtgc
     4021 atccgttgca accagtcggt caaattcgcc gacctcactg cgctggctac cggtctgggt
     4081 gcggagcggt tggcaaccgg acattacgtg cggcgcgtgg acggacctga cgggccggag
     4141 ctgcatcgat ctgccgaccc ggagcgcgac cagagttggt ttctgtttgc aacgactttg
     4201 gcgcagttgc agcaatgctg gtttccgctc ggtggcatgc cggacaagcg cgcggtgcgc
     4261 gacgtggcgg cacggttggg gctggcgatc gccgaaaagc ccgatagtca ggatatttgc
     4321 ttcgtgccgt cagggtcgta caccgaggtc gtcgcacggt tgcggccaga tgcactggag
     4381 gcgggagaga tcgtagccca ggatggctcg gtcgttggaa ggcatgacgg cgtggcgcgg
     4441 ttcaccgtgg gccagagcaa acggctgggt gctgcggcga tggctggcgg cgagcggcaa
     4501 atggtggtcg ccaccgaacc aggaactcgt cgggtggtcg ttggcccgcg gaccgtcagc
     4561 acggatcagg tgaggctgcg cgacgtcaat tggctggtgt cgccgattgc gggtccagta
     4621 cgttgcactg tcaagctgcg cgctcgcgat acgctgcggc ccgccgttgt tgaggcgtgt
     4681 gcggaaggaa ccacggtacg actggatgac cccgcattac cggcacccgg tcaggcctgt
     4741 gtcttttacg atggcgaccg tgtcctgggt ggcgggttca tcacgcggat ggcgaactga
     4801 ccgactcgcg ctgccaaacc aaattcgata ccgcgcggcg acctttggtc acacgactgg
     4861 tttgctccgg tcgagtgatg gtcaggcgat cgccatcaat tgcgaacagc cggagttttt
     4921 ccgtgccgat ctcctccgga aacagcgaca tttccacttt cgttacaaaa cttcctgggc
     4981 tttgcatgcg aacctggccg gaataggcga tcgtttcatt gaacatcgtt gctcgcgcgg
     5041 cgtcat
//
LOCUS       DATAVD010000413         1976 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2830387, whole genome shotgun sequence.
ACCESSION   DATAVD010000413 DATAVD010000000
VERSION     DATAVD010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1976)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1976)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1976
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2830387"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..657)
                     /locus_tag="VHX39_07745"
     CDS             complement(<1..657)
                     /locus_tag="VHX39_07745"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3991050.1"
                     /translation="MANIIRAASRRDVLKISALSTVGGLLGAAQAHAAPKSMTMMHES
                     SFIPPYDAYIKTTMAAAYEKATGIKINYDIVSVGSLQTRVTTAAETGSGPDMSCVYFN
                     WPYLFDEKLVDVSDIAEEIGKKAGGWHENVKEAVVVNGKWKAIPFGNVGQLMNYRMDW
                     FSEVGVKDFPDTWDGLLEAGIKLKKAGHPFGYELGHGFGDNHGWLYPLLWSYGGREVD
                     T"
     gene            complement(840..1973)
                     /locus_tag="VHX39_07750"
     CDS             complement(840..1973)
                     /locus_tag="VHX39_07750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEX3991051.1"
                     /translation="MTEGHTDIETDIAARTDSYFTRTRKIVERFGDKRVTYAIFLRRP
                     VICAPGLMAEWLGAAARERAIEIELTLTHQEGEWVGAGEPLAYLTGSMQHLSQMETIL
                     LQKIGPPCVAAHNAWQMCLMLPNVAFLAMEARHCAGAEMQDMMAYACSVGSTAAKREG
                     AIGFVGNANDATAHWFGTARGLGTMPHSLIGYAGSTLRAAEMFVEVFPDEPMTVLADY
                     FGQEITDALAVCARFPELVEQGRLSFRLDTHGGRFLEGLDPASSYAVLERHAPGAIRH
                     YRDDTELRHLIGTGVSAAAIWRMREALNDAGYRRARIVASSGFGAAKCRVMADARAPI
                     DVVGTGSFIPDSWHETYATADIVEYDGKPMVKLGREFLLRRAD"
BASE COUNT          379 a          634 c          566 g          397 t
ORIGIN      
        1 ggtatcgacc tcacgcccgc cataggacca tagcagcgga tagagccagc cgtgattgtc
       61 gccgaagccg tggccgagtt catagccgaa cggatgaccc gcttttttca gtttgatgcc
      121 agcctccagc aggccgtccc aggtatccgg gaaatccttg acgccgacct cactgaacca
      181 atccatacga taattcatca actggccgac attgccaaag ggaatggcct tccacttgcc
      241 gttgaccaca acggcttcct tgacgttttc gtgccagccg cccgccttct tgccgatctc
      301 ctcggcgatg tcgctgacgt cgaccaactt ctcatcgaac agatacggcc agttgaaata
      361 aacgcagctc atgtccggcc cggacccggt ttccgcggca gtggtaacgc gggtctgcaa
      421 gctgccgaca ctgacaatgt cgtaattgat cttgataccg gtggcttttt cgtaggctgc
      481 ggccatcgtc gttttgatat aggcatcgta cggcggaatg aacgaactct cgtgcatcat
      541 cgtcatgctt ttcggcgcgg cgtgagcctg cgcggcgccg agcaagccgc ccaccgtcga
      601 taacgccgaa atcttcaaaa cgtcgcgccg cgacgccgcg cggatgatgt tcgccattta
      661 cccacccttt tctgttcccg gccctcaggg acggattatc atttgtcacg caacgaatga
      721 tcgccgtatc gcgaggttag aggccgggaa tcgtcgaagt caaccgtgaa ccacacgatt
      781 cccggccatg atgcgggccg caaccggtgc acgcgcaacc caggttttct gcaaccagtc
      841 taatccgccc ggcggagcag gaactcacgg ccgagtttca ccatcggctt gccgtcgtat
      901 tccacgatgt cggcggtggc ataggtttca tgccacgaat ccggaatgaa actgccggta
      961 ccgaccacat cgatcggcgc acgtgcgtcc gccatgaccc ggcatttcgc ggcaccgaag
     1021 ccagacgacg cgacgatccg cgcgcgacgg tagcccgcgt cgttcagtgc ctcgcgcatg
     1081 cgccagatgg ctgccgcgga aactccggtg ccgatcaaat ggcgcaattc cgtgtcgtcg
     1141 cgataatgcc ggattgctcc tggtgcatgg cgttccagca ccgcgtagct gctcgccgga
     1201 tcgaggcctt cgaggaagcg tccgccatgt gtgtccagcc ggaacgacag gcgtccctgt
     1261 tcgaccagtt cagggaaccg tgcgcaaacg gcaagcgcgt cggtgatttc ttgcccgaaa
     1321 tagtccgcca aaacggtcat cggctcatca gggaacactt cgacgaacat ttccgcggcg
     1381 cgtaacgtgc tgccggcgta accgatcagc gagtgcggca tggtgccgag gccgcgcgcc
     1441 gtaccgaacc aatgcgccgt ggcatcgttg gcgttgccaa cgaaaccgat cgcgccctct
     1501 cgtttcgccg cggtactgcc gaccgagcag gcgtaggcca tcatgtcctg catctcggcg
     1561 cccgcacagt gccgcgcctc catcgccagg aacgcaacgt tcggcagcat caggcacatt
     1621 tgccatgcat tgtgcgcggc gacgcagggc ggaccgatct tttgcagcag gatggtttcc
     1681 atttgcgaca aatgctgcat gctgccggtc agataggcca gcggctcgcc ggcaccgacc
     1741 cattcgcctt cctgatgcgt cagggtcagc tcgatttcga tcgcacgttc ccgcgctgct
     1801 gcgccgagcc attctgccat cagcccagga gcacaaatga ccggacgccg gaggaagatc
     1861 gcataggtga cgcgtttgtc gccgaaccgt tcgacgatct tccttgtgcg cgtgaagtaa
     1921 ctatcggtgc gggcggcgat atccgtttcg atgtctgtgt ggccttccgt catggc
//
LOCUS       DATAVD010000414         2602 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1715093, whole genome shotgun sequence.
ACCESSION   DATAVD010000414 DATAVD010000000
VERSION     DATAVD010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2602
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1715093"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..1325)
                     /locus_tag="VHX39_07755"
     CDS             complement(36..1325)
                     /locus_tag="VHX39_07755"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEX3991052.1"
                     /translation="MANVAVIGAQWGDEGKGKVVDWLASRADVVVRFQGGHNAGHTLV
                     VGNETYKLALLPSGLVRGKLCIIGNGVVVDPEALLAEIARVQAQGLKVSPETLRIAEN
                     AALILPFHPALDKARELARGDAKIGTTGRGIGPAYEDRVARRAIRVADLAEPETMSHK
                     LDELLRHYNTLLRELGAETFTKEAMLAHLMALAPQILPFAEPVWERMDTLRKEGKRIL
                     FEGAQAVMLDVDHGTYPFVTSSNTVAATAASGSGIGPWAVGFILGIAKAYSTRVGSGP
                     FPSELHDATGQLLGDRGNEYGTNTGRRRRCGWFDAAMVRQAVKIGGIQGIVLTKLDVL
                     DGLPELKICTGYRINGERVRHLPAGMAAQAAAEPEYETIEGWTGSCRGARSWVDLPAQ
                     AIKYVRRIEELVEAPVTMVSTSPQRDDTILVRDPFEG"
     gene            complement(1329..2492)
                     /locus_tag="VHX39_07760"
     CDS             complement(1329..2492)
                     /locus_tag="VHX39_07760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013641024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEX3991053.1"
                     /translation="MTDDLPNPALLPAGLRDLLPPDAETEASAVEALMDVFAAHGYQR
                     VKPPLLEFEDSLLAGSGAAVAEQTFRLMDPDSQRMMGVRADTTPQVARIATTRLVNAP
                     RPLRLSYAGQCLRVRGSQIAPDRQIAQAGVELIGHDSPEADAEIILVAAEALAAIGLS
                     RVSFDLTLPMLTPTLMDTAGITGAARTALARALDRKDAAEVATHGGSLAPVLTELLLA
                     SGPADRALATLRAAELGQAGRALALRLADAVAAIRTRNPSLRLTVDPVEFRGFRYENG
                     VSVSIFAPGKHEVLGRGGRYICGDTEPATGLTLYPDAILRIAPKREARTRVFIPAGSS
                     QARAAALRREGYATVAALSASGDELAEAARVGCTHVLKNGTVVPLVPETHTGD"
BASE COUNT          450 a          913 c          805 g          434 t
ORIGIN      
        1 cgatgtccgc cggtcgttga taaccggaac cctggctaac cttcgaacgg atcgcgaacc
       61 aaaatcgtat catcgcgttg cgggctcgtg ctgaccatcg tcaccggcgc ctccaccagt
      121 tcctcgatcc gccgcacgta cttgatcgcc tgagccggga gatcgaccca cgaccgagcc
      181 cccctgcacg atcccgtcca gccctcaatc gtttcatatt ccggctctgc tgccgcctgc
      241 gccgccatgc ccgccggcag gtggcgcacc cgctcgccat tgatccgata cccggtgcag
      301 atcttcaact ccggcaaccc gtccagcacg tccaacttgg tcagcacgat cccctggatg
      361 ccgccgatct tcaccgcctg ccgcaccatt gctgcatcga accaaccgca acgccgccgc
      421 cgccccgtgt tggtgccgta ctcgttgcct cggtcgccca gaagctgccc cgtcgcatca
      481 tgcagctcgg aagggaaggg gcctgagccc actcgagtgg agtacgcctt ggcgatcccc
      541 agaatgaagc cgaccgccca gggaccaatg ccggaaccgg aggcagcggt cgcggcaacg
      601 gtgttcgatg acgtaacgaa cggataggtc ccgtgatcca cgtccagcat cactgcctgg
      661 gcgccctcga acaggatgcg cttgccctcc ttgcgcagcg tatccatgcg ttcccacacc
      721 ggctcggcaa atggcaggat ttgtggagcc agcgccatca ggtgcgccag catcgcctcc
      781 ttggtgaagg tctccgcccc cagttcccgc agcaacgtgt tgtagtggcg cagcagttca
      841 tccagcttgt gcgacatcgt ttctggctcg gcgaggtcgg caacccggat cgcgcgccgt
      901 gccacacgat cctcgtacgc cggtccgatg ccgcgtcccg tggtgccgat tttggcatcg
      961 ccgcgagcca gttcgcgagc cttgtccaac gccggatgga acggcagaat cagcgcggca
     1021 ttttccgcaa ttcgcaaagt ttccggtgaa acctttaacc cttgcgcctg gacccgggcg
     1081 atttccgcca gcagtgcctc gggatcgacc acgacgccat tgccgatgat gcaaagtttg
     1141 ccgcgcacca gccccgacgg cagcaacgcc agcttatagg tctcgttgcc gacaaccaac
     1201 gtatggccgg cgttatgacc gccctggaac cgcaccacga catccgcccg gctggcgagc
     1261 cagtcgacga ccttgccctt gccctcgtcg ccccattggg cgccgatcac ggcgacattt
     1321 gccacgccct agtctccggt gtgagtttca ggaaccagcg gcaccacagt gccattcttt
     1381 agcacatgcg tgcagcccac gcgcgcggct tctgccagct cgtcgcccga ggccgacaat
     1441 gcggcgacgg tcgcataacc ctcgcggcgc aacgcggctg cccgcgcctg gctggagccg
     1501 gcggggatga agacccgggt gcgagcctcg cgctttggcg caattcgaag aatcgcgtcg
     1561 ggatagagtg tcagtccggt cgccggttcc gtgtcgccac agatataccg tccgccacgg
     1621 ccgagcacct cgtgtttgcc gggtgcgaag atgctgacgg acacgccgtt ctcgtaacga
     1681 aagccgcgga actccaccgg atcgacggtc aaccgcaacg acggattgcg ggtgcggatc
     1741 gccgccacgg catcggcgag gcgtagtgca agggctcggc cggcctggcc cagttcggcg
     1801 gcgcgaaggg tggcgagggc tcggtcggca ggaccggagg ccagcagcaa ttcggtcagc
     1861 accggggcca gagagccgcc atgcgtggca acctcggcgg cgtccttgcg gtccagcgca
     1921 cgtgccaagg cagtgcgagc ggcaccggtg atccccgctg tatccatcaa agttggcgtc
     1981 agcatcggca gggtcaggtc gaagctgacg cggctcaggc cgatcgcggc gagcgcctcg
     2041 gccgcaacca gaatgatctc cgcatccgcc tccggactat catgaccgat cagttcgacc
     2101 cctgcctggg cgatctgccg gtcgggcgcg atctgcgagc ctcgcacgcg caggcattgg
     2161 cccgcgtagg acaaccgcaa tggccgaggc gcattgacca gtcgcgtggt cgcaatccgc
     2221 gccacctgcg gcgtggtgtc ggcgcgcacg cccatcatgc gttggctgtc ggggtccatc
     2281 aggcggaacg tctgctcggc caccgcggcg ccggagccag ccagcagact gtcctcgaac
     2341 tccagcagag ggggtttgac gcgctgatag ccatgggccg cgaatacatc catcaacgcc
     2401 tcgaccgcgg acgcctcggt ttcggcgtcg ggcggcagca ggtcgcgtag gccggcgggc
     2461 aacagcgcgg gattgggcag gtcgtcggtc atggcaggcg cctatcatca aacccgccgg
     2521 ggaggaacac ccgatcggac aatttccggg agactgcaca ggctctcctt gtcgcccggg
     2581 ccgaccatca cccgtcatcc cg
//
LOCUS       DATAVD010000415         5354 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2645402, whole genome shotgun sequence.
ACCESSION   DATAVD010000415 DATAVD010000000
VERSION     DATAVD010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5354
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2645402"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1277)
                     /gene="istA"
                     /locus_tag="VHX39_07765"
     CDS             complement(<1..1277)
                     /gene="istA"
                     /locus_tag="VHX39_07765"
                     /inference="COORDINATES: protein motif:HMM:NF033546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEX3991054.1"
                     /translation="MELFEQLRREHEFGIGTIAGVAAKFGVHRRVVRRAIGGALPPVQ
                     HYPQRTKPKLGAVAEFIDKVLDEDRRAPRKQRHTARRIHRRILREFPDAAVAESTVRN
                     HVRERKRQMGLDRRETFVPQSYGWAQEAQVDWYEAWVDLGDERTKVQVFAMRSMASGA
                     AFHRAYLHATQQAFLEAHEHAFAYFGGVFKLLRYDNLASAVRKILRGYRREETVRFIA
                     FRSHWRFAAEFCTPGEGHEKGGVEGEGGYFRRNHLVPVPRVADLDGLNELLLNGCRED
                     ETRVLDGRTQTVGTAMSEERGHLLSRVTEGFELADVVFPLVDKQGCVPVKTNFYSVPV
                     RPGIRVEARVYPLHVEIWHTSRRIARHERCHSRRQHVLDLEHYLDVLSYKPGAFAGST
                     PLAQWRAAGRWPACYDELWDRLRTRHGKQNGTRA"
     gene            1674..2066
                     /locus_tag="VHX39_07770"
     CDS             1674..2066
                     /locus_tag="VHX39_07770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991055.1"
                     /translation="MAWIVRLVQLGADGSEPFADVMTINRPDDLGDIANLGLTVADGK
                     RVLAGLQQEIVAAQARSHSVRRPECRSCSGVCHVKDYRNHAVATHFGQVSVRLPGFHG
                     AGCSAIEAGVRWPSHCRSKSGTHMMKFP"
     gene            complement(2348..4321)
                     /locus_tag="VHX39_07775"
     CDS             complement(2348..4321)
                     /locus_tag="VHX39_07775"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEX3991056.1"
                     /translation="MTALRMRHLAWIGIPVVLIVLIVAFWNWDWFIPLVQARVSAALG
                     RPVTIEHLHVRLGRISQLTADGVVVANPPDWSTDDPPFVAIRALTIQADAWGYILGKG
                     LVLPLIGIDGPSVLLVETTKGAANFRLSSGGSGTSPKIGEIRIADGDAHIVIPKLKAN
                     FNTRIETQGNGDSVKVLVEAKGTYAAQPITGHLVGGALLSLRDTQNPWPVALNVTNGP
                     TRVTLDGTIRDPLAFQGADLKLGFSGPDMGLLEHLVGFPIPKTPAYRITGKLDLEGFS
                     KIRFRDFRGRLGNSDLEGTIEEQPGGTEQNKQAKPVVTLNLRSNRVDLVDLNGFIGGK
                     PGRPTTADATPAERRAAAEARASRKLLPDTPLSIPKLQWADIHLRYRAAHIEGRDMPL
                     DDLSVAMEVVGGRISVHPISFGIGKGRLSGDVDLTPTNGRDVHAKIDLRMQNLDVSRM
                     MAATHTFQGAGSVSGVGAIDGTGDSLASLMANGNGEVKMAMAGGNLSAVLVDLTGLQF
                     GNALLSRLGIPKQTPVECFIGDLGLRRGVLDVKAMTLDTGEAIVNVVGDVDLSKEAID
                     LGLKTDSKHFSIGSLPGRLNIVGTFKDPSIRPGTEETGRLGAAAGLGVLFAPLAILPT
                     IQFGTSAQEDARCGRLLEQARASAGGKALPAPR"
     gene            complement(4675..5061)
                     /locus_tag="VHX39_07780"
     CDS             complement(4675..5061)
                     /locus_tag="VHX39_07780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX3991057.1"
                     /translation="MKHPVRVLFAIAIAAMFSAQSFAQGVPQTAGIMKVDPATVATGY
                     RVSKVLGSTVVNQANETVGTIDDLIVTPNEVVPFAVLSVGGFLGMGTKYVVVPFNSIK
                     IQDKKMVLPGATKESLKALPDFKYAS"
BASE COUNT         1014 a         1670 c         1644 g         1026 t
ORIGIN      
        1 gcacgggtgc cgttctgctt gccgtgccgc gttctcagcc ggtcccacag ttcgtcgtag
       61 caggcgggcc agcgacccgc cgcgcgccac tgcgccagtg gcgtggaacc ggcaaaggcg
      121 ccgggcttgt aactcaaaac gtccaggtaa tgctcgagat ccaagacgtg ctggcggcgg
      181 ctgtggcagc gctcgtggcg ggcaatccgg cggctggtgt gccagatctc gacgtgcaac
      241 ggatacaccc gtgcctctac ccggatgccg ggacgaaccg gcaccgagta gaagttcgtc
      301 ttcaccggga cacagccctg cttgtccacc agtggaaaca ccacgtcggc cagttcgaag
      361 ccctcggtca cgcgtgacag taaatggccg cgttcttcgg acatcgcggt gccgacggtt
      421 tgcgtgcggc catccagcac ccgtgtctcg tcctcgcggc agccgttcag cagcagctca
      481 ttcagcccat caaggtcggc gacacgcggc acgggtacca ggtggttgcg ccggaagtag
      541 ccgccttcgc cctcaacgcc gcccttctcg tgcccttcgc ccggcgtgca gaattccgcg
      601 gcaaaccgcc aatgcgagcg gaacgcgata aaccgcaccg tctcttcgcg ccggtaaccg
      661 cgcaggattt tgcgtaccgc gctggccaga ttatcgtaac gcagcagctt aaatacgccg
      721 ccgaaatagg cgaaggcgtg ctcatgcgcc tcgaggaagg cctgctgcgt ggcatgcagg
      781 taagcccggt ggaacgccgc cccgctcgcc atcgagcgca tcgcgaacac ctgcaccttg
      841 gtccgctcat cgccgagatc gacccaggcc tcataccagt cgacctgcgc ctcctgagcc
      901 caaccgtaac tttgcggcac gaaggtctcg cgccggtcca gccccatctg gcgtttacgc
      961 tcgcgcacgt ggttgcgcac cgtcgactcg gcgaccgctg cgtcggggaa ctccctcagg
     1021 atccgccgat gaatgcgccg ggcggtgtgg cgctgcttgc gcggcgcgcg acggtcctcg
     1081 tcaagcacct tgtcgatgaa ctccgccacc gcccccagct tcggcttggt ccgctgtggg
     1141 taatgctgca ccggcggcag cgcgccgccg atcgcccgcc gcacgacgcg ccgatgaaca
     1201 ccgaactttg cggccacgcc cgcgatcgtg ccgatcccaa actcgtgctc ccgacggagc
     1261 tgctcgaaca attccacttt ggctttccag tccacgaaag gccccccgat ccgatcgggc
     1321 tgaccgtagg ttcaaggacg gggggtgggc caagattggc cagcactcct gggccaaagt
     1381 tcgatagcat tgccagacgt cctcagcggt cggtctgaga ccccatcgcc gtaggacgcg
     1441 gttggaccgc ttgctgagag cacctaagaa gaacagggtg catggcatcc cgccgcgaca
     1501 ccaaccgcac cgggtgaccc accgcctcgt cacgcgctca agttcgataa catcgtcagc
     1561 gcgttctgcc gaaactgcga ccctcatgcc gaggttgacg ggaccgccgc aagtttgggg
     1621 tgcgggggcc agagcggtat tttcgcgtct tttgtcctac caggggtgga cgcgtggctt
     1681 ggattgtgag gctggtgcaa ctcggggctg acggcagcga gccgtttgcc gacgtcatga
     1741 cgatcaaccg gccggatgat ctcggcgata tcgccaatct gggtctgacc gtggctgacg
     1801 ggaagcgggt gctggcgggc ctccaacagg agatcgttgc cgcacaagct aggagccact
     1861 cggttcggcg gccagagtgc cggagctgta gtggcgtctg tcatgtgaag gactaccgga
     1921 accatgcggt cgcgacgcat ttcggccagg tctcggtgcg gcttcccggt tttcacggtg
     1981 ctgggtgtag cgcgatcgag gctggtgttc gttggccatc gcattgccgc tcgaaatcag
     2041 ggacgcacat gatgaaattc ccctgacaga ggcatcccca tacgaggccg gcctcctcca
     2101 gcgtcagccc aatcatttgc ggggcgtatt cggccacagc cgcgcgacgg ccgatctcaa
     2161 taacgccaac gaccccgccc ggtccaacca gctccaacat aacccgccac ttcatcccca
     2221 actcccggct ataacgaccg ggaagtccca tagcaccccc acctttggga tggtgatcat
     2281 gctacaaaga aagcaccgtt cgttcattgg ggccaaaaga cactcccttc ggcctcaggc
     2341 gatcacccta acggggcgcc ggtaatgcct tacctccggc acttgcacgg gcctgttcca
     2401 gcagtcggcc gcagcgagcg tcctcctgcg cagaagtccc aaattgaatg gtgggcagga
     2461 tcgccaacgg cgcgaacagg acgcccagac cagcggcggc accgagtcgg ccggtttcct
     2521 cggtgccggg gcggatggag ggatccttga atgtgccaac gatattcagg cggccgggca
     2581 gcgagccgat gctgaaatgc ttggaatccg tcttcagccc cagatcgatg gcttctttcg
     2641 acagatcgac atcgccgacg acgttcacga tcgcctcgcc ggtgtccagc gtcattgcct
     2701 tcacgtccag cacgccgcga cgcaggccca gatcgccgat gaaacattcc actggcgtct
     2761 gttttggtat accaagtcgc gagagcagag cgttgccgaa ttgcagaccg gtcaggtcga
     2821 ccagcacggc cgagaggttg ccgccggcca tcgccatctt aacctccccg ttgccgttcg
     2881 ccatcagcga ggccagcgaa tcgccggtcc catcaattgc cccaacacca ctgaccgaac
     2941 cggcaccctg gaacgtgtgc gtcgccgcca tcatgcgcga gacgtcgagg ttctgcatcc
     3001 tcaggtcaat cttggcatgg acgtcccggc cgttcgttgg cgtcaggtcg acatcgccac
     3061 tcaaccggcc tttaccgatg ccgaagctga tcggatggac ggagattcgg ccgcccacca
     3121 cctccatcgc gaccgaaaga tcatccagcg gcatatcacg gccctcgata tgggcggcgc
     3181 gatagcgcag gtggatgtcc gcccattgaa gcttgggtat actaaggggg gtatcgggta
     3241 gcagcttccg actggcgcgc gcctcagcgg ctgcccgacg ttcggccggt gtagcgtcgg
     3301 cggtggtcgg gcggcccggt ttaccgccga taaagccgtt caaatcgacc agatcgactc
     3361 ggttggatcg caggttcagc gtgaccaccg gctttgcctg cttgttctgc tcggtgccgc
     3421 cgggttgttc ttcgattgtg ccttcgaggt cggagttgcc gaggcggccc cggaaatctc
     3481 gaaaccgaat cttgctgaat ccttccagat cgagtttccc ggtgatccgg taggccggcg
     3541 ttttggggat tgggaagccg accagatgct ccaacaatcc catgtcggga ccgctgaacc
     3601 ccagcttcag atcggcgccc tgaaatgcca gcggatcgcg gatggttccg tcgagggtta
     3661 cccgggtcgg gccgtttgtc acattcaaag ctaccggcca aggattttgg gtatcgcgta
     3721 gtgacagaag tgcgccgccg accaagtgcc cggtgatcgg ctgcgcggca taggtgcctt
     3781 tggcctcgac cagtaccttg acgctgtcgc cgttaccctg ggtctcgatc ctggtgttga
     3841 aattggcttt gagcttgggg atcacgatgt gggcgtcgcc gtcggcgatg cggatctcgc
     3901 cgattttcgg cgacgtgccg ctgccgccgg aggataggcg gaaattcgcg gcacctttcg
     3961 ttgtctctac cagcaggacg gaggggccat cgatgccgat cagcggaagg acaaggccct
     4021 ttccgaggat gtatccccag gcgtcggcct ggatggtcaa agcgcggatg gccacgaagg
     4081 gtggatcatc agtggaccag tcgggcggat tagcgaccac aacgccgtcg gcggtgagct
     4141 gggagatgcg gccgaggcgc acgtgtaaat gttcaatggt aacggggcga ccgagtgccg
     4201 cggagacgcg ggcctggacg agggggatga accagtccca attccagaat gcgacaatga
     4261 gcacgattag aacgacggga atgccgatcc aggccagatg ccgcatgcgt agagctgtca
     4321 tggaatgcgc aacgattgac aacgcggtga gttccgcctc gttgatcaat tcattcggcg
     4381 cgccggtgag ttgttgttcg catggaacgc ggcttccgac agtcggcctc aggcgatcat
     4441 gccagtgtgg tgcgtggatc agatgtgtag gcgcatcgac ctcggcgccg cttcggaaga
     4501 gcattcaaag ctgtggggct tgttcagagt tcgaccgcga cccggccgtt gtcccagcag
     4561 catgatcccc cgacgtctgg acagtcccgc ggctgggcgc agcgcaagtc ggtgccaact
     4621 taactgaaca tctttagcaa gatctaccgt ttattattgc aaccatcgct tacgctaaga
     4681 cgcgtattta aagtcgggga gtgctttgag tgattcttta gtggcgcccg gcagcaccat
     4741 tttcttgtcc tgtatcttaa tcgagttgaa tggcacgact acgtattttg ttcccatacc
     4801 aagaaagcct ccgactgaga gaacggcgaa cggcacgacc tcgttcgggg tgacaatcag
     4861 atcatcaatc gtgccaacgg tctcgttggc ctggttgacg accgtgctgc cgagcacctt
     4921 cgagacgcga tatcccgtgg caaccgttgc cgggtcgacc ttcataatcc ccgcagtctg
     4981 gggtacgccc tgcgcaaagg attgcgcgct aaacatcgcc gctatcgcga tggcaaataa
     5041 aactcggacc ggatgtttca tgattcgact ccacttagac aacggcgcgc cctaggtggg
     5101 cacctaactc agtctaaacg aactggataa cgtaaggttc atgtggctca cgggaccgtg
     5161 cggtcgcagg gattagaaac acaatctgca gatgaggtgg cgatgctcag tcacctcggg
     5221 tggcccacag cgataaatgc gccatcatgt agcaaccgcc accagcccga cgttgaagta
     5281 taggatgggg tattccaggt tctgtcgcaa atttggtcga ccgatccgtc tggtgtacgt
     5341 ttgccggcgg cgat
//
LOCUS       DATAVD010000416         2181 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1900867, whole genome shotgun sequence.
ACCESSION   DATAVD010000416 DATAVD010000000
VERSION     DATAVD010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1900867"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(38..1150)
                     /locus_tag="VHX39_07785"
     CDS             complement(38..1150)
                     /locus_tag="VHX39_07785"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3991058.1"
                     /translation="MADSPNAALPLKLRRLARDMTMEIGWYHEFHRQVDKQSDTDAFA
                     MGLDQVSQAEEWGLDAVWLAEIHQQAARSVMSAPMTVLSAIAGRTSRVKLGTGVQVLP
                     LTHPLRLAEETGTVDQISRGRLLMGVGRSGNPRAYGAYGVPYSESRERFFETLDILKL
                     AWTQPTFSFQGKYHSFNEARAVPRPFQTPHPPIRIAGASEDTFPVLGALGYPLFVAVR
                     SGTLEGLAPDLVAYRAAYTAAGHPGKGETHLRLTVHVAETDAEAQAQAHDSVMAGYKK
                     LVTQLEGSPNARRRAQLADVQTLTYEAAMREKVVIGSPDTVAARLSELQDHLGIDGIL
                     AELNFGAMVPPEHMMRSLQLLLQEVRPRIRQLQVAA"
     gene            1194..>2181
                     /locus_tag="VHX39_07790"
     CDS             1194..>2181
                     /locus_tag="VHX39_07790"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3991059.1"
                     /translation="MRFGLFGSAAARRGSGEFDSTEGYRDFIEYNVEAEALGFHGTFV
                     VEHHFTGFGQVSATLNLLTWLGARTKTLRLGTAVMVLPWHNPVLLAEQAATLDLLSGG
                     RLDFGIGTGYRYKEFRGFDTGLDEAREKFEESIEVILKAWTSEERFSHKGKYWTFNDV
                     IVEPPPFRKPHPVVWMGAGSDRSIREVARRGFNLLLGQYASPADVKHAVAIFREAVEA
                     RGEMWDPMRVGITRAFFVAETDHERDEALERRLANRMRQLKLATAPDGTVLGGPDRAG
                     GDPVAVNVNSAIYGTPDEIARKLHDLQAAGAGYLLMNGGGSGGGERGRRSLRR"
BASE COUNT          426 a          665 c          678 g          412 t
ORIGIN      
        1 aaattgtgcg gaacgaaaaa actttgctac gcgcaggtta cgccgccact tgcaattgcc
       61 ttatccgcgg ccgcacttcc tgcaacagca gttgcagcga acgcatcatg tgctcgggcg
      121 gcaccattgc gccgaaattc agctccgcca gaatgccatc gatacccagg tggtcctgca
      181 attcggacaa tcgtgctgcg accgtatcgg gcgagccaat caccaccttt tcccgcatcg
      241 ccgcctcata ggttagcgtc tgaacatctg ccagttgtgc gcggcgcctg gcattcggtg
      301 atccttccag ttgcgtcacc agtttcttat accccgccat cacactatcg tgtgcctggg
      361 cttgcgcctc cgcatcggtt tcggcgacgt gtacggtcag acgcagatgc gtctctccct
      421 tgccgggatg gccggccgcc gtataggccg cccggtaggc aaccagatcc ggcgcgagcc
      481 cttccaatgt cccactgcgc accgcaacga acagcggata gccaagcgcg ccgagcaccg
      541 gaaacgtgtc ctcggaagcg ccggcgatgc ggatcggcgg gtgcggcgtc tggaacggcc
      601 gcggcacggc gcgcgcttcg ttgaagctgt gatacttgcc ttgaaacgaa aatgtcggct
      661 gcgtccacgc gagcttcagt atgtccagcg tttcgaagaa ccgctcgcgg ctttccgaat
      721 acggcactcc ataggcgcca taagcccgcg ggttgccgct gcgaccaaca cccatcagca
      781 gccgtccacg actgatctga tcgaccgtgc cggtttcctc agccagccgc agcggatgag
      841 tcagcggcag cacctgaacg ccggtgccga gcttcaccct cgacgtgcgg cccgcgatgg
      901 cagacagcac ggtcatcggc gcgctcatca ccgagcgggc ggcctgttga tggatctccg
      961 ccagccatac tgcgtcgagg ccccattctt cggcctggga gacctgatca aggcccatcg
     1021 cgaaggcgtc ggtgtcggat tgcttatcca cctggcggtg gaactcgtga taccagccga
     1081 tttccatggt catgtcccgt gcaaggcggc gcaacttaag cggcaacgcg gcatttggcg
     1141 agtcagccat taccgattaa gctaatccgg aagaatgtaa caaggagata caaatgcggt
     1201 tcggtctgtt cggcagcgct gcggcacggc gaggcagcgg tgaattcgac agcacggaag
     1261 gttatcgcga ctttatcgaa tacaatgtcg aagccgaagc gctaggtttc cacggcacct
     1321 tcgtggtcga gcatcatttt accgggttcg gtcaggtgtc ggcgacattg aacctgctga
     1381 cctggcttgg cgcgcggacc aaaaccttgc ggcttggcac ggcggtaatg gtgctgccct
     1441 ggcacaatcc ggtgctgctg gcggaacagg cggcgacgct cgatttgctg tccggcgggc
     1501 gactcgattt cggcatcggc accggctacc gctacaagga attccgtggt ttcgacaccg
     1561 gattggatga agcgcgcgag aaattcgaag agtcgatcga ggtgatcctg aaggcgtgga
     1621 catcggaaga acgcttctcg cacaaaggta aatactggac attcaacgat gtcatcgtgg
     1681 agccgccgcc atttcgcaag ccgcacccgg tcgtgtggat gggagcgggc agcgaccgct
     1741 cgatccgcga ggtggcgcgc cgcggtttca acctgctgtt ggggcaatat gcatcgcctg
     1801 cagacgtgaa gcacgccgtt gctatcttcc gcgaggcggt cgaggccaga ggcgagatgt
     1861 gggacccaat gcgggtcggc atcacccggg cattcttcgt tgccgaaacc gatcacgagc
     1921 gtgatgaggc actggaacgg cgattggcga accggatgcg ccaattgaaa ctggccaccg
     1981 caccggatgg caccgtgctc ggcggcccgg atcgagccgg cggcgatcct gttgcggtta
     2041 acgtgaacag tgccatctac ggcacaccgg atgagatcgc ccgaaaattg cacgatttgc
     2101 aagcagccgg tgccggatat cttctgatga acggcggcgg ctcgggcggc ggagaacgcg
     2161 ggcggcgcag cctgcgccgt t
//
LOCUS       DATAVD010000417         1991 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_785796, whole genome shotgun sequence.
ACCESSION   DATAVD010000417 DATAVD010000000
VERSION     DATAVD010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1991
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_785796"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..325)
                     /locus_tag="VHX39_07795"
     CDS             complement(<1..325)
                     /locus_tag="VHX39_07795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991060.1"
                     /translation="MGTGRQGRWLQVTLPLAGVVLGVVLIAGPFAATVARSLLVWGPD
                     GAAVSAGNFIGLFTDPRFAAAAINTLISGSCTTVLALMLGFTLAWLVARTDMPGRGWF
                     ETANLV"
     gene            431..1462
                     /locus_tag="VHX39_07800"
     CDS             431..1462
                     /locus_tag="VHX39_07800"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3991061.1"
                     /translation="MQFGLFGAATAQRGGGPDVDSAAGFKDYIDYVIEAEALGYASAF
                     IVEHHFTGFGQVSATLNLLTWIGARTSTLRLGTAVIVLPWHNPVLLAEQAATVDLLSG
                     GRLDFGVGKGYRHNEFASFRIPMTEAEPRFEEAIDIITKSWVSNERFSFHGKYWQFDD
                     LIVEPPTIQKPHPPFWQGAGHPDSIRRVAARGHNLLLDQFASFEETGRRFNIYREAMI
                     ANGLGFDPRQVGVARAFYVANTDAEKEAALDRRLMAQRRLHTISQTPDNNNKASIMAF
                     SDTREASEESALYGNPDQICRKIEKLRDMGVEYMLLNGGGTSRDNLRRFAKEVMPHFR
                     TEASRRAAE"
     gene            complement(1576..>1991)
                     /locus_tag="VHX39_07805"
     CDS             complement(1576..>1991)
                     /locus_tag="VHX39_07805"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3991062.1"
                     /translation="RAFDSWVQQFGRVIDGQDRIVHTAGYAAYLELKAKGAPLGFSFP
                     PDGMPVDPTAIGVLGNAPHPQAARLFIDWMLGLPGQKALVAEAFSYSVRPDMGPPEGG
                     VPLSQLKLLLPKDWASLEATQRQFVRDWDKITGVR"
BASE COUNT          383 a          633 c          637 g          338 t
ORIGIN      
        1 gcaccaggtt ggcggtttcg aaccagccgc gtcccggcat gtcggttctg gcgaccagcc
       61 acgcgagcgt gaaccccagc atcagtgcca gaaccgtcgt gcaactgccg gatatgagcg
      121 tattgattgc ggccgctgcg aagcgggggt cggtgaacag gccgatgaaa ttgccggccg
      181 atacggcggc gccgtcgggt ccccagacca ggaggcttcg ggccaccgtt gcggcgaagg
      241 ggccggcaat cagcaccaca cccagcacca cccctgcgag gggcagtgtc acctgcaacc
      301 aacgcccttg ccggccggtg cccaccgtcg gtttccccct gaatcgattc gcgtggatcc
      361 gcgcctcttg tgatcggggc ggactttacg caaagtgcgg ccgcaggcca agcgtggcag
      421 gagaatatcg atgcaattcg gacttttcgg cgcggccacc gcgcagcgag gcggcggccc
      481 ggacgtcgac agcgccgccg gattcaaaga ctacatcgac tatgtgatcg aggccgaggc
      541 cctgggctat gccagcgcct tcatcgtgga gcaccatttc accggtttcg gccaggtctc
      601 cgccacgttg aatctgctga catggatcgg cgcccgcaca tccaccctgc ggctgggaac
      661 tgccgtgatc gtgctgccct ggcacaatcc ggtgctgctg gcggaacagg ctgcgaccgt
      721 cgacctgctg tccggtgggc ggctcgattt cggcgttggc aaggggtacc ggcacaacga
      781 gttcgcgagt ttccgcattc cgatgacgga agccgagccg cggttcgagg aagcaattga
      841 tattatcacg aaatcatggg tctctaacga gcgtttcagc ttccacggca aatattggca
      901 gttcgatgac ctgatcgtcg agccgcccac catccagaag ccccacccgc cattctggca
      961 gggcgccggt catccggatt cgattcgccg cgttgccgcg cgcgggcaca acctgctgct
     1021 ggaccagttt gcgtcgttcg aggaaaccgg ccggcgattc aacatctacc gggaggccat
     1081 gatcgccaac ggcctcggct tcgatccaag gcaggtcggt gttgctcggg cattctatgt
     1141 ggcgaacacg gacgccgaaa aggaagccgc actggaccgg cggttgatgg cgcagcgccg
     1201 gttgcacacg atcagccaga cgccggacaa caacaacaag gccagcatca tggcattctc
     1261 cgacacgcgg gaagcgagcg aggagagcgc gctgtacggc aaccccgacc agatttgccg
     1321 caagatcgaa aagctgcggg acatgggtgt ggaatacatg ctgctgaacg gcggcggcac
     1381 atcgcgcgac aacctgcgtc gttttgccaa ggaagtgatg ccgcatttcc ggaccgaggc
     1441 gtcgcgccgg gcggctgaat agcctgacgg gtctgaccgg aaagacaact gccagttcgc
     1501 atcccagcga cgttcagtca ccatgaacct cgtgtcacgg ccgtggcgag cgtgacacga
     1561 ggggggcgtg cgacgtcatc tgaccccggt gatcttgtcc caatcccgga caaattgccg
     1621 ttgggtggcc tccagcgatg cccaatcctt cggcagcaac agcttgagct ggctgagcgg
     1681 aacgccgcct tccggcggtc ccatatcggg ccggacggaa taggagaacg cctctgccac
     1741 cagggctttc tgtcctggca gccccagcat ccagtcgatg aacaggcgtg ccgcctgcgg
     1801 gtgcggcgca ttgcccagga ccccgattgc ggtgggatcg accggcatcc cgtccggcgg
     1861 aaaggaaaat cccagcgggg cgcccttggc tttcaattcc agatacgcgg cgtagccggc
     1921 tgtgtgaacg atacggtcct gaccgtcgat cacccggccg aattgctgca cccaggaatc
     1981 gaaggcgcgc g
//
LOCUS       DATAVD010000418         1954 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_785990, whole genome shotgun sequence.
ACCESSION   DATAVD010000418 DATAVD010000000
VERSION     DATAVD010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1954
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_785990"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..395)
                     /locus_tag="VHX39_07810"
     CDS             complement(<1..395)
                     /locus_tag="VHX39_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010667955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEX3991063.1"
                     /translation="MTSLVLLEFDATGIKQPSRSAVAAASALGEVHVLVAGAGLADAT
                     AAAAKLPGVAKVLVADNPALDHLMAEPTAALLLGLAPAYSHMLAATTAVGKNVMPRVA
                     ALLDVQPISDIAGVEDADTFIRPIYAGNGL"
     gene            complement(398..1147)
                     /locus_tag="VHX39_07815"
     CDS             complement(398..1147)
                     /locus_tag="VHX39_07815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEX3991064.1"
                     /translation="MKIIVPVKRVVDYNVKVRVKSDGSGIETAGVKMSMNPFDEIAVE
                     EAVRLKEKGVATEIIAVSMGVPQCAETIRTALAMGADRGILVESTEDLQPLAVAKLLK
                     AIADKEEPKLIILGKQAIDDDMSATGQMLAALLGWSQGTFASKLTVEGETLTVIREVD
                     GGLETVALTLPSIVTTDLRLNEPRYASLPNIMKARKKPIANMKPGDLGVDVTPRLTVL
                     KVSEPPKRKAGQKVKTVEELVSKLRTEAKVI"
     gene            complement(1311..1502)
                     /locus_tag="VHX39_07820"
     CDS             complement(1311..1502)
                     /locus_tag="VHX39_07820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin transmembrane helix small protein"
                     /protein_id="HEX3991065.1"
                     /translation="MRVFLTVLVGILMLATLGVLLVGMVGMVREGNPRRSNKLMQWRV
                     LLQGVTILLFMILMSLLRS"
     gene            1710..>1954
                     /locus_tag="VHX39_07825"
     CDS             1710..>1954
                     /locus_tag="VHX39_07825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019090836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991066.1"
                     /translation="MIRLVLILLCALLAGVPTPSSAQKPATPAAGQPAISAEQARAAL
                     QVLNDPAKRAAFEATLNAIVKAQPATAAHAAAPATTPA"
BASE COUNT          348 a          720 c          553 g          333 t
ORIGIN      
        1 agcccattgc ccgcatagat cggccgaatg aacgtatccg cgtcttccac cccggcgatg
       61 tcactgatcg gctgcacatc cagaagcgcc gcgacccgag gcatcacgtt cttccccacc
      121 gccgtcgtcg ccgccagcat atgcgaatac gccggcgcca gcccgagcag cagggccgcc
      181 gtcggctccg ccatcaggtg atccaacgcc ggattgtcgg cgaccagcac cttggcgact
      241 ccgggcagct tcgccgcggc ggcagtggcg tcggccagac ccgcgccggc aaccaggaca
      301 tgcacttcgc ccagggcgga ggcggcggcg accgcgctcc gcgacggctg cttgatgccc
      361 gtcgcgtcga actcgagaag aacgagactc gtcatcgtca gatcaccttc gcttcggtcc
      421 ggagtttgct caccagttct tccaccgtct tgaccttctg cccggccttg cgcttcggcg
      481 gttccgacac cttcagcacc gtcaaccgag gcgtcacatc gacccccaga tcacccggct
      541 tcatattggc gatcggcttc ttgcgcgcct tcatgatgtt cggcagcgag gcataccgcg
      601 gctcgttcaa ccgcaaatcg gtggtgacaa tggacggcag cgtcagcgcc accgtctcca
      661 acccgccatc aacctcgcgt atgacggtca acgtctcgcc ctcaaccgtc aacttcgagg
      721 caaacgtccc ctgcgaccat cccagcagcg cggccagcat ctgccccgtc gcgctcatgt
      781 cgtcatcgat cgcctgcttg cccaggatga tgagcttcgg ctcctccttg tccgcgatcg
      841 ccttcagcag cttggcgacg gccagcggct gcaggtcctc ggtgctctcc accaggatgc
      901 cgcgatcggc gcccatggcc agcgcggtgc ggatggtctc ggcgcattgc gggacaccca
      961 tcgacaccgc gatgatctcg gtcgccacgc ccttttcctt caggcgcacg gcttcctcga
     1021 ccgcgatctc gtcgaacggg ttcatcgaca tcttcacgcc ggcggtttcg atccccgacc
     1081 catcggactt cacgcgaacc ttcacgttgt agtcaacaac ccgtttgacg gggacaataa
     1141 tcttcatggg aaaccgcacc gcttcctaac gacgttggac aacagacata taaggcgctc
     1201 ggtaccatcc tggttccgaa cgccagttcg cacctgcgag agggcgccgg accatatggg
     1261 tgaggtttcc gcctgtcaaa cgccagtgtt accggcgggt aagatgcagg tcaggaacgc
     1321 aaaaggctca tgaggatcat gaacagcagg atcgtcacgc cctgcagcag gacacgccat
     1381 tgcatcagct tgttggaccg tcgcgggttg ccctcccgca ccatcccgac catgccgacc
     1441 agcagcacac ccagcgtggc gagcatcagg ataccgacca ggaccgtcag gaaaacgcgc
     1501 atgagatgat agtaggcagc attgcccccg gcgtcatccc cacgtcacgg tcggaccgcc
     1561 cccgtcgggg tccatcggag tcgaaccgcg gccctggccc gaaatgccgc tggcccgaaa
     1621 tgccgccggc ccgaaatgcc cccggcctga aatgcccccg gtctgaaatg cgttgacccg
     1681 gcgccgccac ctgtggtcgt acccgcggca tgatccgcct cgtcctcatc cttttgtgcg
     1741 cgttgcttgc tggcgtccca acgccgtcat ccgcgcaaaa gcccgccacc ccggcagccg
     1801 ggcagcccgc gatctccgcc gaacaggcgc gcgcggcgtt gcaggtgctg aacgatccgg
     1861 ccaagcgtgc cgccttcgag gcgaccttga acgcgatcgt caaggcacag ccggcgaccg
     1921 ccgcgcacgc cgctgctccc gccaccacgc ccgc
//
LOCUS       DATAVD010000419         5003 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2272923, whole genome shotgun sequence.
ACCESSION   DATAVD010000419 DATAVD010000000
VERSION     DATAVD010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5003
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2272923"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1238
                     /locus_tag="VHX39_07830"
     CDS             <1..1238
                     /locus_tag="VHX39_07830"
                     /inference="COORDINATES: protein motif:HMM:NF039910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX3991067.1"
                     /translation="PMGEMFRRYWIPALLAEELAEPDCPPVRVQLLSERLVAFRDSNG
                     RLGLIDEFCAHRHVSLWFGRNEECGLRCPYHGWKYDVTGQCVEVPSEPESTGFRARIK
                     LRSYPLIERGGVLWTYMGPPEHQPGLPEYEFALVPPEQNYVSKRLQYCNWLQALEGGI
                     DSSHVSWLHRDALHSDPLMQGARGNQYNMGDMAPVFEIADHPAGLFIGVRRNAEPGTY
                     YWRITPWCMPAFTMIAPRGDYSVHGHFWIPIDDENCWAWSFDYHPTRALTAAEVEAMR
                     DGKGIHTRTIPGTYIPVANRDNDYLMDRTGQRAGKTFSGVSGIAMQDASLQESMGPII
                     DRSQEHLTTTDNGIILARQRLMRAARALAQQGVAPPGTDPATHRVRSAAVVLPADEVF
                     HVAAREALTARPGVPPASV"
     gene            1249..2148
                     /locus_tag="VHX39_07835"
     CDS             1249..2148
                     /locus_tag="VHX39_07835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1/P1 nuclease"
                     /protein_id="HEX3991068.1"
                     /translation="MRNAFKLCIAVALLCNLAWSGPVCAWGDEGHEIIALVAQSRLDP
                     VARNHVDALLAADTDTLTAPNIAAAATWADKFRDTNRNGARQNTGRWHFVDLELSAPD
                     LNQACFGHPALPAGTLASNGPAQDCIVDKIDEFAAELAKPTTDPAERVVALKFLLHLV
                     GDLHQPLHASDDHDRGGNDKRVSAAGLHAATLHHYWDTEFVEQLGPNPQQIAALLITR
                     ISAADATRWAQGNPAEWAMESFNVAKDDTYGRLPAPGARGRYRLTDTYVAMADQDAAM
                     QLSKAGVRLAVMLNRAIGQGKAQ"
     gene            complement(2375..3871)
                     /locus_tag="VHX39_07840"
     CDS             complement(2375..3871)
                     /locus_tag="VHX39_07840"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3991069.1"
                     /translation="MKFLTDEMISGLLPAEIASFPSPVPTQIVSSDEYLPVPQTPRQR
                     EVEARLIDLSDRLAARQGQSRRRFFQTASGMAASFVALNQVFGPLFDVSEAEAATPEL
                     AQTRADALAGQFVIDGHTHFLRDDTRLMGFVKGREAVGQFGWNKELSGKEQTIADLKY
                     GNYVKEIYMDSDTKVALLSNSPSDVPEDWFIPQEQVFKTREMVNKQAGSRRMLAHFTI
                     TPGKPGWLDQVDEAIERFQPDSWKGYTVGDNTHKELAAYPWHADDQKLMYPFYEKIAK
                     TGIRNVCIHKGLFAPAVEEKFPRLRPYADVNDIGRAAKDWPQLNFLVYHSGYRWVGGN
                     PADGMAEFDNTGRSSWASDLADIPEKYGVNNVYGDLGQLFAWTSVAEPRLSAALMGTL
                     IKGLGVDRVVWGTDAVWTGAPQWQIEGLRRLEIPEDMQKKYGFKPLGAADGPVKTAVF
                     SGNSARLYALEKHAEVVNQDRFAALKSDYQANGIGRSNLRYGYVSKPG"
     gene            complement(4121..>5003)
                     /locus_tag="VHX39_07845"
     CDS             complement(4121..>5003)
                     /locus_tag="VHX39_07845"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3991070.1"
                     /translation="SRLGVTPSALSHSMRQLEERLGVRLLHRTTRSVSATDAGQRLLR
                     RLRPAIDQIAGALENLNQERLRPLGRLRIYATSHLVATEVVVPIWDRYLSTYPEVHLE
                     LHVGDAPIDIVAEGYDAGLGPQDRAAADMIAVRVTGPMKIAIVGAPAYFARQRTPRTP
                     DDLIRQSCIQYRLATGGTLVWPLVRNGKTRRISVDGRVMVNDADLAIRAAIDGLGIAF
                     TPETLAEPFLRSGQLVRVLEEWSPSFEGLFVYYPGHRQVPASLRAFIDMIRTARGSVS
                     PRNSRKNPFAEDQAIGR"
BASE COUNT          969 a         1565 c         1500 g          969 t
ORIGIN      
        1 cgccgatggg cgagatgttc cgccgctatt ggattcccgc gctgctggcc gaagaacttg
       61 ccgaacccga ttgccctccc gtacgcgtgc aattgctgtc cgagcggttg gttgccttcc
      121 gtgacagcaa cggacgcctc ggcctgatcg acgaattctg cgcgcatcgt catgtctcgc
      181 tgtggttcgg ccgcaatgag gaatgcggtt tgcgttgtcc ctaccacggt tggaaatacg
      241 acgtgaccgg acaatgcgtt gaagtgccgt cggaaccgga gtcaaccggg ttccgtgcaa
      301 ggatcaaatt gcgttcctat ccgttgatcg aacgaggcgg cgtgctgtgg acctacatgg
      361 ggccgccgga acatcaaccc gggcttcccg aatacgaatt cgctcttgtg ccgccggagc
      421 aaaactacgt ctccaaacgg ttgcagtatt gtaactggtt gcaggcgttg gaaggcggca
      481 tcgattccag ccatgtgtcc tggctgcatc gcgatgcatt gcactccgat ccgttgatgc
      541 agggcgcgcg cggcaaccaa tacaacatgg gcgacatggc gccggtgttt gaaatcgccg
      601 atcacccggc cggtttgttc atcggcgtgc gccgcaatgc ggaacccggc acgtattact
      661 ggcggatcac gccgtggtgc atgccggcct tcaccatgat cgcgccgcgc ggcgattact
      721 cggtccacgg gcatttctgg atcccgatcg atgatgaaaa ctgttgggcc tggagtttcg
      781 attaccatcc gacacgagca ctgaccgccg ccgaggtcga ggcgatgcgc gatggcaaag
      841 gcatccatac gcgcaccatt ccggggacat atattccggt tgcgaaccgg gacaacgact
      901 atctgatgga tcgtactggg cagcgggccg gcaaaacatt cagcggcgtg tcgggcatcg
      961 ccatgcagga tgcatcgttg caggaaagca tgggtccgat catcgaccga tcgcaggagc
     1021 acctgaccac gaccgacaat ggcatcatcc tggcccggca acgtttgatg cgagcggcgc
     1081 gtgcgctggc gcagcagggc gtggcaccgc cgggaactga ccccgcgacg catcgcgtgc
     1141 gctcggccgc ggtggtgttg ccggcggatg aggtattcca tgttgccgcg cgtgaggcac
     1201 tgacggcccg cccaggggtg ccgccagcgt cagtgtaacg ggtcgcccgt gcgaaacgcg
     1261 ttcaaactgt gcatcgcggt cgcgttgtta tgcaatctcg cgtggtccgg accggtctgc
     1321 gcatggggcg atgaaggcca cgagatcatc gcgctggttg cacaatcccg gctcgatccc
     1381 gtcgcacgca accacgttga tgcgctgttg gccgctgata ccgacaccct gaccgcgcca
     1441 aacattgccg ccgccgccac ctgggccgac aagtttcgcg ataccaatcg caatggcgca
     1501 cgtcagaata ccggccggtg gcacttcgtc gatctggaac tcagtgcgcc ggacctcaac
     1561 caggcgtgct ttggccatcc ggcgttgccg gccgggactt tggcgtccaa cggaccggcg
     1621 caagactgta tagtcgacaa gatcgacgaa tttgccgcgg aattggcaaa accgacgacg
     1681 gatccagcgg aacgcgttgt ggcgctgaag ttccttttgc atttggttgg cgatttgcac
     1741 caaccgctgc acgcctcgga cgaccatgac cgcggcggca atgacaagcg ggtttcggca
     1801 gcgggattgc acgcggcaac actgcaccac tattgggaca ccgagttcgt tgagcaactt
     1861 ggaccaaacc cacaacagat cgcagcactt ctgatcacgc gtatttcggc ggccgacgca
     1921 acgcgttggg cgcaaggcaa tcccgctgag tgggctatgg aatcattcaa cgttgcaaaa
     1981 gacgacactt atggccggct tcctgcacca ggtgcgcgcg gccgttaccg gctgacggac
     2041 acgtatgtcg ccatggcgga ccaggacgcg gccatgcaac tcagtaaagc cggcgtgcga
     2101 cttgctgtga tgctgaaccg ggcgattggg cagggaaaag cgcagtagct tcggccactg
     2161 tcaatccggc aggtcgaaca accggcacca tccgttcgga ctgatatccc cctgcacgac
     2221 ctggcacgat tgcggccggc ggaagaacgt gcacccaacg caactcaagc cgccgcgcgg
     2281 cgtagcctga taatttgcct ccgtctgaga cattttcgcg gacgtgtccg ccgaagccca
     2341 gatcgctgcc gtcagcacaa accgtcgcga cgtttcaccc cggtttgctg acatacccgt
     2401 accgcagatt gctccgccca ataccgttgg cctgatagtc ggacttcaac gcagcgaagc
     2461 gatcctggtt caccacctca gcgtgtttct ccagcgcgta cagccgcgcc gagttaccgc
     2521 tgaacaccgc ggtcttgacc gggccatccg cggcacccag tggcttgaac ccgtatttct
     2581 tttgcatgtc ctcggggatt tccaaccgcc gcaagccctc gatctgccat tgcggcgcac
     2641 cggtccacac cgcgtcggtg ccccatacca cgcgatccac accgagcccc ttaatcagcg
     2701 tccccatcag cgccgccgac aaccgaggtt ccgccacact cgtccaggcg aacagctgcc
     2761 cgagatcacc gtatacgttg ttgaccccat acttctccgg gatatccgcc agatcgctgg
     2821 cccaggaact gcggccggtg ttgtcgaact ccgccatgcc gtcggccgga ttgccgccga
     2881 cccagcgata tcccgagtga tagacaagga aattcaactg cggccagtcc ttggcggcgc
     2941 gcccgatgtc gttgacatcg gcgtagggcc gcaggcgcgg gaatttttct tcaacggccg
     3001 gcgcaaacag gcctttgtgg atgcaaacat tacggatgcc ggttttggca atcttctcgt
     3061 agaacggata catcaatttt tgatcgtcgg catgccacgg atacgcggcc agttctttgt
     3121 gcgtattgtc gccgacggta tagcccttcc atgaatccgg ctggaaccgc tcgatcgcct
     3181 cgtcgacctg gtccagccag cccggcttcc cgggagtgat cgtgaagtgg gccagcatgc
     3241 ggcgagagcc ggcctgtttg ttcaccatct cacgcgtttt gaacacttgc tcctgcggaa
     3301 tgaaccaatc ttccggcaca tcggatggag aattcgacag caacgccacc ttggtgtcgc
     3361 tatccatata gatttctttc acgtaattgc cgtatttcag atcggcaatc gtctgttcct
     3421 tgccgctgag ttccttgttc cagccaaact gacctaccgc ttcccggccc ttgacgaagc
     3481 ccatcagccg cgtgtcgtcg cgcagaaaat gcgtgtgccc atcgatcacg aactgtcccg
     3541 ccagtgcgtc cgcccgagtc tgggccagtt ccggcgtggc ggcctcggcc tcactgacat
     3601 cgaacagcgg accgaatacc tgattgagtg cgacgaacga agccgccatg cccgaagcgg
     3661 tctggaaaaa ccgccggcgt gactggcctt gacgggctgc gagccggtcg ctcaggtcga
     3721 tcagacgggc ttcaacttcg cgctgccgtg gggtctgcgg cacaggcaga tattcatcgc
     3781 tggacacgat ctgtgtcggt accggcgagg gaaacgacgc gatttctgcc ggcagcagcc
     3841 cgctgatcat ttcatcggtc aggaacttca tggaactctc cccagattgg cgccgcgaac
     3901 ggcgctgttt gacgcacgct aacgctcaat tcgggagtcc ggcaaggctt gccacgtcgc
     3961 ccgggtcaga acgccggcga gcggaaagcg gacatcgtgt cgaagtcatg cggtatgttg
     4021 ctgcgcttta atgcctgcca aagccaggag cgtcgcccga cgcggacttc aggcgtttgc
     4081 caaagtctgt ggcaatgatg tgcgcgattg ggaccaaccc tcagcgcccg atcgcctgat
     4141 cctcggcgaa cggattttta cgtgagtttc tgggcgacac cgagccgcgg gcggtgcgga
     4201 tcatgtcaat gaacgcgcgc agacttgctg gcacctggcg gtgcccggga taataaacga
     4261 agagaccttc gaacgatggc gaccactcct caagcacgcg gaccaattga cctgaacgca
     4321 ggaatggttc ggccagggtt tcgggcgtga aggcgatgcc taacccatca attgccgcgc
     4381 gaatggccaa atcagcgtca ttgaccatga cacgtccgtc caccgaaatc cgccgcgtct
     4441 tgccgttccg caccagcggc cacaccaacg tgccgcccgt ggcaagacgg tattgaatgc
     4501 agctttggcg gatgagatca tcgggcgtac ggggcgtgcg ttgtcgcgcg aagtaggctg
     4561 gcgcgccaac aatggcaatc ttcattggtc ccgtgacccg gacggcaatc atgtctgccg
     4621 cagcgcggtc ttgcgggcct aacccggcgt cgtagccttc cgccactatg tcgataggtg
     4681 cgtcgccgac gtggagttcg agatggactt ccgggtaggt cgacaagtag cggtcccaga
     4741 tcggcaccac cacctcggtc gcgaccaaat ggctcgtcgc gtagattcgc agacggccca
     4801 acggacgcag gcgttcctgg ttcaggttct ccagcgcacc ggcgatttga tcgattgccg
     4861 gtcgaagccg cctgagcaaa cgttggccag cgtcagtggc tgatacgctg cgcgtcgtgc
     4921 ggtgcagcaa tcggaccccg agccgctcct ccagctgacg catcgagtgg ctgagcgccg
     4981 acggcgtgac gccaagacgc gat
//
LOCUS       DATAVD010000420         2300 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_786046, whole genome shotgun sequence.
ACCESSION   DATAVD010000420 DATAVD010000000
VERSION     DATAVD010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2300
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_786046"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1618
                     /locus_tag="VHX39_07850"
     CDS             <1..1618
                     /locus_tag="VHX39_07850"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX3991071.1"
                     /translation="GAGLNPTTGQVISSGGHGTYTAPGELIMYPEGFRPLEVLKEDDY
                     QYNVGEKFNVLGWAVDADVGYGKDIDNIYTWNSGNRSLFIDTHTSPSNFYDGSFTASQ
                     LTGTIDATHPFNVGLASPLTVAVGVEARQDEFAIGAGDPDSYYKEGAQSFPGFTPSAA
                     GDHSRKNYAGYIDLAVAPIEQLQIDVAGRAEHYTDFGDTQIGKITARYDFNPQWAIRG
                     TVSTGFRAPTLAEEFYTAVNVSPNSATVQLPADSAAARVLGLNNLMPEVSTSYSAGIV
                     AHPLDDLSVTLDAYSIAIGNRITSSSTVNSAGGTINTPLVNQAIAADGVILDPTATQN
                     GATAFLNGISTLTQGVDVTANYPTDLGAYGLVDWTFAANYNETAISRVAPTPSVLTAS
                     NAGATFFYPDTLYNFTHSAPQTKVGLTANWSLDEFGVTLRETLYGAQHYYTSPEGCTT
                     LDTCVFDPQAAVGLTDLEVRYNVTDQLQFALGANNLFNIRPDTVPYDQNAYGAGSGAP
                     ADGGNVIGAPVAAAFDPNGGYYYGRITFNF"
     gene            1834..>2300
                     /locus_tag="VHX39_07855"
     CDS             1834..>2300
                     /locus_tag="VHX39_07855"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEX3991072.1"
                     /translation="MAAPARNLGSKSKTLFWVASVTPCDKSLKFDPGAFKDVLAWFKH
                     NGADGVVVLGSTGEYPSFNTEERMQIMEVAGKYKDGMNIICSTGTADFPDTIKLSKHA
                     ADHGAEGVLVIPPFYYKQPPLAGLIRYYSLVFDALPQSLAVNLYHFPSMSAVPV"
BASE COUNT          444 a          734 c          670 g          452 t
ORIGIN      
        1 aggtgcgggc ctcaacccga cgaccggcca ggtgatttcg tcaggtggcc acggcactta
       61 caccgcgccc ggcgaactga tcatgtatcc ggaaggcttc cgtcccctgg aagtgctgaa
      121 ggaagacgat taccagtaca atgtcggcga gaagttcaat gtgttgggct gggcggtgga
      181 cgccgatgtc ggttacggca aggacatcga caatatctat acttggaact cgggcaaccg
      241 ctcgctgttc atcgataccc acacttcgcc gagcaatttc tatgacggca gcttcaccgc
      301 cagccagttg accggcacca tcgacgccac gcatcccttc aatgtgggtc tggcttcgcc
      361 tctgacggtt gcggtcggcg tggaggcacg ccaggacgag ttcgccatcg gcgctggcga
      421 tcccgactcc tattacaagg aaggcgcgca atccttcccc ggcttcactc cgtcagcggc
      481 gggcgatcat agccgcaaga actatgccgg ttatatcgac ctggcggtcg cgccgatcga
      541 gcagttgcag atcgacgtgg cgggccgcgc cgagcattat accgacttcg gcgacaccca
      601 gatcggcaag atcacggcgc gttacgactt caacccgcaa tgggcgatcc gcggcacggt
      661 ctcgaccggc ttccgcgcgc cgaccttggc ggaagaattc tacaccgccg tcaacgtctc
      721 gccgaattcg gcgaccgtgc agctgcctgc cgactccgcg gcagccaggg ttctaggcct
      781 gaacaatctg atgccggaag tctcgaccag ctattcagcc ggcatcgtgg cccatccgct
      841 ggacgatctc agcgtgacct tggacgccta ttcgatcgcc ataggcaatc gcatcaccag
      901 ctccagcacc gtgaacagcg ctggtggcac gatcaacacg ccgctggtca atcaggcaat
      961 cgcggcggac ggtgtcattc tcgaccccac cgccacccag aatggcgcga cggcgttcct
     1021 gaacggcatt tccacgctga cccagggcgt cgacgtcacg gcgaattatc cgaccgactt
     1081 gggcgcttac ggcctggtcg attggacctt cgcggccaac tacaacgaga ccgccatctc
     1141 ccgggtcgcg ccgaccccgt cggtgcttac cgcttccaac gcgggtgcga ccttcttcta
     1201 tccggacacg ctgtataact tcacgcacag cgcgccgcag acgaaagtcg gtcttactgc
     1261 gaattggtcg ctggatgagt ttggcgtcac cctgcgtgag accctctatg gtgcgcagca
     1321 ttattacacc agcccggagg gctgcacgac gctcgacact tgcgtgttcg atccgcaggc
     1381 agccgtgggc cttaccgacc tggaagtccg gtataacgtc accgaccagc ttcagttcgc
     1441 tctcggcgcc aacaacctct tcaacatccg tcccgacact gttccgtacg atcagaatgc
     1501 gtatggcgcc ggctcgggcg ctccggctga tggcggtaat gtcatcggcg ctccggtggc
     1561 cgcggcgttc gatccgaacg gcggctatta ctatggccgc atcacgttca acttctaagt
     1621 ctctgacgcc ttaaagatcg acccgtccat ttcccccaag gaaatggacg ggtttttctt
     1681 tgcgcgggcg gcaaaccagc cgtgcgcttt tttgctgcgc cgaaaaggcg tagagattga
     1741 atcatgatcg aagggagagc gcctatggag acgacacgca gggatgcatt ggctttggta
     1801 ggcggagcgg ccttggctgc ggccggtccg gcaatggccg cgcccgcccg caatctgggc
     1861 agcaagtcca agaccctgtt ctgggtcgcc agcgtcacgc cctgcgacaa gagcctgaaa
     1921 ttcgatcccg gcgccttcaa ggacgtcctg gcctggttca agcataacgg cgccgacggc
     1981 gtggtggtgc tgggttcgac gggcgaatat ccgtcgttca ataccgaaga acgcatgcag
     2041 atcatggaag tggccggcaa gtataaggac ggcatgaaca tcatctgctc gaccggcacc
     2101 gcggacttcc ccgacacgat caagctgtcg aagcatgctg ccgatcacgg cgccgaaggc
     2161 gttctggtga tcccgccctt ctattacaag caaccgcctt tggccggctt gatacgctat
     2221 tactcgctgg tgtttgatgc gctgccgcag agcctggcgg tcaatcttta tcatttcccg
     2281 tccatgagcg cggtgccggt
//
LOCUS       DATAVD010000421         2786 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1528466, whole genome shotgun sequence.
ACCESSION   DATAVD010000421 DATAVD010000000
VERSION     DATAVD010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2786
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1528466"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            200..292
                     /locus_tag="VHX39_07860"
     tRNA            200..292
                     /locus_tag="VHX39_07860"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:234..236,aa:Ser,seq:gct)
     gene            421..834
                     /locus_tag="VHX39_07865"
     CDS             421..834
                     /locus_tag="VHX39_07865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991073.1"
                     /translation="MTRLMLAALLACAPALAVMGQGNPVDRAIKAVAGRDAEVAFYTD
                     IRPDCTSGPLPAIRLAVPPLHGTVAVKRATLKATNLKQCLGLEVPAFVAFYHATPGFA
                     GADIFELEVTMPDGRKRHERVSVTVTSGTGSGQGI"
     gene            1438..>2786
                     /locus_tag="VHX39_07870"
     CDS             1438..>2786
                     /locus_tag="VHX39_07870"
                     /inference="COORDINATES: protein motif:HMM:NF014577.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEX3991074.1"
                     /translation="MKMVKSLLLGSAAGLVAVTAGQAADLPVKAKPVEYVKICSLYGA
                     GFYYMPGTDLCIKVGGWVRAEIAAGEINGSVTWGPFNGNQLNRTTSNYVARARAYITA
                     DVRNQTEYGTARGYVALGVNTNDVGLNTSANTFSSNRAFVQWAGLTAGLSQSFYDFYS
                     VPAAQYRGGYLPASDTGDPGWWVWAYTAQFGGGFSATISAEARRVNQICNANTIGAGS
                     CSIAPGGFASTTTGGAASVAPTPGAYGGEQAPDVIGNLRLDQAWGGAQIMGALHEVNP
                     VYYGGGSSITSGHPTDQFGWAAGAGLKINFPSIAAGDYFQGQVNASQGALRYLFFTPN
                     TNWGMVNGNREAFGVLSDCVYGGSVAGGSASGCELTSAWGFNASFEHYWTPSWHQSLY
                     GAYYQVSYDTAANNMLCSAESFGTGTGTAARAGAGCSNNWSDWGIGTRLQWDVTKTF"
BASE COUNT          502 a          828 c          901 g          555 t
ORIGIN      
        1 cgctgctctt gattcatggc gttcatcgac ggctctgtgg gagggatgcc aagtgctatc
       61 caacaggcca caaggggtca acggcgcacc gggcgcagtt tcggggcgcc caagcggcgg
      121 cgccctcgcg cgtaaattaa ggtcggccgt ttgacgtcgg ggtgccggga gcataggtat
      181 tccgccatcc agagcatccg gagaggtggc cgagtggctg aaggcggcgg tttgctaaac
      241 cgttatacgg tctaaagccg tatcaagggt tcgaatccct tcctctccgc catgctattg
      301 ccgtcaggtc cttgagctgt cgggtctcgg gcgaaggcct gcgcggtgag gtttccttcc
      361 acgcgttggt ctcgagacgg cagcgaaaat gcaagtcaag tccttgctga cgggcgttcg
      421 atgacacgat tgatgctcgc cgccttgctc gcctgcgccc cagcacttgc ggtgatgggg
      481 caaggcaatc cggtcgatcg tgcgatcaag gcagtggcag gccgcgacgc tgaggtcgcg
      541 ttttacaccg acattcggcc ggactgcacc tcagggccgc taccggcgat tcggctcgcg
      601 gtgccgccgt tgcatgggac ggtggcggtc aagcgcgcta ccctcaaagc gaccaatctc
      661 aaacaatgtc tgggcctgga agtgcccgct tttgttgcct tttatcacgc caccccaggc
      721 ttcgccgggg ccgacatttt cgagcttgaa gtcaccatgc cggacggccg caagcggcac
      781 gagcgcgtca gcgtcacggt gacaagcggg accggttccg gccaggggat ttgagggcga
      841 ctggccaagc cccgccgctg taacgcgaag cggcgagatt cacccggttc tggcgaatcg
      901 cggccacgca aagcgaaagt tacgcgggtt ttcacctcca aatgcgggct ggagcacgcc
      961 taaatgagct tcggcggcct tgtttcctgc catttcctcg ccgcgatccg gcctaggtcc
     1021 tgttctcagc gctcatggcc gatgggttcg agcccgaagc tgaggcagca ggcgggggtc
     1081 tcgtttcgag ccggtttatc tgcataagcg attgatactt cgtcatattc ttcgggcggc
     1141 tgccgcaagc atccgcgagc ggaatggtaa aacgccgggt aagatttgcg tgttttttac
     1201 gcaacacctt cccgaaaacg gcaaaactgg gctgtgactc gggcggttct tgattgcgcg
     1261 gcggaactcc ttggttaaag gtgcgctggc gacggagggg ggaaccccaa gtcgcccaga
     1321 ccgtccctcg gggattttga aggtcggact gggaactggg gctcaagggg gaccttccag
     1381 ggtggcagca cccggcgggg aatggaccct cccacggcaa acaactggag gttcaagatg
     1441 aagatggtga aaagcctcct cctcggctcc gcggccggtt tggttgcggt tactgcgggg
     1501 caggcagctg atcttcccgt caaggccaag ccggtcgagt acgtgaagat ttgtagcctc
     1561 tacggggcgg ggttctacta tatgcccggt accgaccttt gcattaaggt cggcggctgg
     1621 gttcgggctg aaatcgctgc aggcgagatc aacggcagcg tgacctgggg gccgttcaac
     1681 ggcaaccagc tcaaccggac cacgagcaac tatgttgcgc gcgcccgggc ttacatcacc
     1741 gcggacgtcc gtaaccagac cgaatacggt acggcccgtg gctatgtcgc ccttggtgtc
     1801 aacaccaacg acgttggtct caacacgtca gccaatacgt ttagttccaa ccgcgccttc
     1861 gtgcagtggg cgggactaac cgctggtctg tcgcagtcgt tctacgactt ctacagtgtc
     1921 ccggcggcac agtaccgggg cggctatctg ccagcttcgg ataccggcga tcctggctgg
     1981 tgggtgtggg cctatacggc gcagtttggt ggcggcttct cggccacgat ctcggccgaa
     2041 gcgcggcgcg tcaaccaaat ctgtaacgcc aatacgatcg gtgctggctc ctgcagcatc
     2101 gcgcctggcg gctttgccag cactacaaca ggtggagcag cttcggttgc tcctacgcct
     2161 ggggcttatg gtggtgagca ggcgcccgac gtcatcggca atttgcggct cgaccaggcc
     2221 tggggcggcg ctcagatcat gggcgcgttg catgaggtca accccgtcta ctacggcggt
     2281 ggttcatcga taaccagcgg gcatccgacc gaccagttcg gttgggcggc cggcgctggc
     2341 ctgaagatca atttcccgag catcgctgcg ggcgattact tccaaggcca ggtcaacgcc
     2401 agccagggcg cgttgcggta cctgttcttc acgcccaaca ccaattgggg catggtgaac
     2461 ggcaatcgtg aagcctttgg cgtgctgtcc gactgcgtct acggcggcag cgttgctggc
     2521 ggtagcgcca gcggctgtga actgaccagc gcctggggct tcaacgcctc gttcgagcat
     2581 tactggacgc cgtcatggca ccagtcgcta tacggcgcct actaccaggt gagctacgac
     2641 actgcagcca acaacatgct ttgctcggcg gagtccttcg gtaccggcac cggtacagcc
     2701 gccagggcag gtgcgggttg cagcaacaac tggtcggatt ggggcatcgg cacccgtctc
     2761 cagtgggacg tgaccaagac gttcta
//
LOCUS       DATAVD010000422         4317 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3390191, whole genome shotgun sequence.
ACCESSION   DATAVD010000422 DATAVD010000000
VERSION     DATAVD010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4317
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3390191"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="VHX39_07875"
     CDS             <1..299
                     /locus_tag="VHX39_07875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TRCF domain-containing protein"
                     /protein_id="HEX3991075.1"
                     /translation="PEEVDNLLGVVALKRSCREAGVEKLEAGPKGMVLSFRGNAFSNP
                     AGLVRWLSSKGGLVRLRPDHKLAISRDMDVVTRLKFARDTLKSLDQIVRQAKAA"
     gene            complement(302..892)
                     /locus_tag="VHX39_07880"
     CDS             complement(302..892)
                     /locus_tag="VHX39_07880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008942845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEX3991076.1"
                     /translation="MIDQLKTNNKAWAARMVAADAGFFKRLEGQQAPEYLWIGCSDSR
                     VPANEIVDLDPGELFVHRNVANLAPPQDANYLSVLQFAVDVIKVKHVIVVGHYGCGGI
                     AAAVDGKRLGLVDHWLHPIREVFNDNRAELEAIADQRTRLNRLCELNVIRQVRNVSSD
                     VFVQDAWARGQPLSVHGWVYALGNGLVRDLNVTVSQ"
     gene            complement(933..2255)
                     /locus_tag="VHX39_07885"
     CDS             complement(933..2255)
                     /locus_tag="VHX39_07885"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3991077.1"
                     /translation="MTKPIAPPSIRGKQRAALIMLVVAGTLNYLDRSTLSIANPLIRQ
                     ELGLSIADMGLLLSAFLWAYAFAQLPGGALVDRVGPHRLLAGGLGLWSIAQAVAGFVT
                     SFWQFSIARVFLGLGEAPMFSSAVRVVRDWYNVRDRGLPTGIWNCTSSLGPAIAPPIL
                     TVLMISFGWRWMFGIMGVVGIVVAATWYLLYRDPAEAHFTEEERHYLTDGEEHRTYAP
                     VRLAEWLGLFRFRTTWGLVLGFFGVVYMGWLYLAWLPGYLEIQRHMSIPKTGIVAAIP
                     FAFGVVGSISGGWIADWLMRRGFSPVNSRKVPVIVGLLGMVIFTVVAAETPSDTLAVA
                     AISAALMFGASASGMSWALASVAAPANCTASLGAIQNFGGDLGGALAPTVTGFIVQAT
                     GSFVPALLVSASIGLVSALMYLVVIRGEPISSAELDAVAGLATSNPTV"
     gene            2466..2837
                     /locus_tag="VHX39_07890"
     CDS             2466..2837
                     /locus_tag="VHX39_07890"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX3991078.1"
                     /translation="MAGNAQKIIDLDHQRMTAMARKDVATLTKILSNDLIYTHSSARM
                     DTKQTLIGAMESGATVYTSVEPSDVVAQDLGDAVVLTGIAAISVNSGGNPNSFRVRFT
                     DVYANKSGEWQMVTWQSTKLA"
     gene            2853..4001
                     /locus_tag="VHX39_07895"
     CDS             2853..4001
                     /locus_tag="VHX39_07895"
                     /inference="COORDINATES: protein motif:HMM:NF018180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxide hydrolase"
                     /protein_id="HEX3991079.1"
                     /translation="MAPIPFTLSVPDEAIADLRARLALTRFPDQAPDAPWAYGTDLGY
                     MKTLVPYWKDQFDWRAQEAALNAFPQFKVAMPDVDLHYLHVPGVGPSPTPLLLMHGWP
                     GSVFEFVDIIPRLTDPARFGGDPADAFTVVAPSLPGYGLSFKPNQKRFNIEAIAACFA
                     SLMTDVLGYTRYAAQGGDYGAFTASRLGHSHAENLIGIHINLLTIPRDRAPPANPTEE
                     ERRYFAELAAWLKEETGYQWIQGTKPQTLAYGLTDSPAGLAGWIAEKFRTWTDCDGDP
                     ESVISRDHLLANVSLYWFTGAIGSSFWPYYARMHGPWPIPAGGTVDVPMGYCAFPKEI
                     IRPPRSIAQQTYTNIQRWTPMPKGGHFAAMEQPEALATEIRAFFKGLR"
BASE COUNT          834 a         1437 c         1325 g          721 t
ORIGIN      
        1 tgccggagga ggtggacaat ctgctggggg tcgttgcgtt gaagcggtcg tgccgggagg
       61 cgggggtgga gaagctggaa gccggtccga aaggcatggt gctgtcgttc cgcggcaacg
      121 ccttctccaa ccccgcaggc ctggtgcgct ggctatccag caaaggtggc ctggtgcggc
      181 tgcgacccga ccacaaactg gcgatctccc gcgacatgga tgtggtcacg cggctgaaat
      241 tcgcccgcga cacgctgaag tcgctggacc agatcgtgcg gcaggcgaaa gcggcgtgat
      301 attactgtga tactgtaacg ttcaggtccc gcaccagccc gttgcccagc gcataaaccc
      361 agccatgcac gctgagcggc tgtccccgcg cccaggcgtc ctgaacgaat acgtcggatg
      421 aaacgttgcg cacctggcgg atgacgttca actcgcacaa ccggttcagc cgcgtccgct
      481 gatccgcgat cgcctccagt tccgctcggt tgtcgttgaa cacttcccgg atcggatgca
      541 gccaatggtc caccagcccg agccgcttgc catccactgc ggccgcgatg ccaccacagc
      601 cgtagtgacc caccacgatg acgtgcttca ccttgatgac atcgacggcg aactgcagca
      661 cggagaggta gttggcgtcc tgcggcggcg ccaggttggc gacgtttcga tgaacgaaca
      721 gctctcccgg gtcgagatcg acgatctcat tcgccggcac ccggctgtcg gagcagccga
      781 tccagaggta ttccggcgcc tgctggccct ccagccgctt gaagaaccct gcatccgccg
      841 caaccatccg agcggcccag gccttgttgt tcgtcttcag ttgatcgatc atgccccatc
      901 caaaagacga acaaccggca tcggtcaaga ggtcatacgg ttggattgct cgtggcgagg
      961 cctgccaccg cgtccagttc cgccgaggag atcggctcac cacggatcac caccaggtac
     1021 atcagcgccg acaccagccc gatcgaggca ctgaccagca gcgccggcac gaaactgccg
     1081 gttgcctgaa cgatgaatcc ggtcaccgtg ggggccagcg cgccgcccag gtcgccgcca
     1141 aaattctgga tcgcgcccag cgaggcggtg cagttcgccg gcgccgcgac cgaggccagc
     1201 gcccaggaca tgccgctggc cgatgcgccg aacatcagcg ccgccgagat tgccgcaacc
     1261 gccagcgtgt cgctgggtgt ttcagccgcg accaccgtga agatcaccat gcccagcaat
     1321 ccgacgatca ccggcacctt gcggctgttg accggcgaaa acccccgccg catgagccaa
     1381 tcggcgatcc agccgccgct gatgctgccg acgacgccga atgcaaaggg aatcgccgcg
     1441 acgataccgg ttttcgggat cgacatgtgc cgctggatct ccagatagcc cggcagccag
     1501 gccaggtaca gccagcccat atagactacg ccgaaaaatc ccagcaccag gccccaggtg
     1561 gtgcggaacc ggaacaagcc cagccactcg gccagccgga ccggggcata ggtccggtgc
     1621 tcctcaccgt cggtcagata atgccgttct tcctcagtga aatgcgcctc ggccgggtcg
     1681 cgatacaaca gataccacgt cgcggcgacg acaatgccga ccacgcccat gatgccgaac
     1741 atccagcgcc agccgaagct gatcatcagc acggtcagga tcggcggcgc gatagccggc
     1801 cccagcgacg acgtgcaatt ccatatgccg gtgggcaatc cgcggtcgcg cacgttgtac
     1861 cagtcgcgca ccacgcgaac ggcggaggag aacattggcg cctcgccaag ccccaggaac
     1921 acgcgggcaa tggaaaactg ccaaaacgac gttacgaatc ccgccaccgc ctgggcgatc
     1981 gaccacaacc caaggccgcc cgccagcaac cggtgcggac caacacggtc aacaagcgcg
     2041 ccgccgggca actgcgcgaa cgcataggcc cacaggaacg ccgacagcag cagccccata
     2101 tcggcgatcg acagcccgag ttcctgccgg atcagcgggt tggcgatcga gagcgtcgag
     2161 cggtcgagat agttcagcgt cccggcgacc accagcatga tcagggcggc acgctgtttg
     2221 ccgcggatgc tgggcggggc gattggtttg gtcatggaat gtcctccggc gaaggtctca
     2281 cgcgccctcg ctgaacggat catgatacag gcggcggttt ctcggacaat gcccgatggc
     2341 gtcagcgcgg aggcatcgga tcgggcattt cggaagtcct ggtatgcgtc cccggttcga
     2401 cagcgcttcg tcctctcggc tagactttcc gagatacgga aacccccagg aaggatgccc
     2461 caaaaatggc cggaaacgcg cagaaaatca tcgatctcga ccatcagcgg atgaccgcga
     2521 tggcgaggaa ggatgtcgcg acgctcacca agatcctctc caacgacctc atctacacgc
     2581 attcctccgc tcggatggac accaagcaga ccctgatcgg cgccatggaa tccggcgcca
     2641 ccgtctatac ctcggtcgag ccgtcggacg tggtcgcgca ggatctgggg gacgcggtgg
     2701 tgctgaccgg catcgccgcc atcagcgtga attccggcgg caatcccaat tcgttccggg
     2761 ttcggttcac cgacgtctac gccaacaaaa gcggcgaatg gcagatggtc acctggcaga
     2821 gcaccaaact ggcttagata gggaggtcag gcatggcccc gatcccgttt accctctctg
     2881 tcccggatga ggccatcgcc gaccttcggg cgcgtctcgc gctgacccgt tttcctgatc
     2941 aggcgcccga cgcgccctgg gcgtacggca ccgacctcgg ctacatgaaa accctggtgc
     3001 cgtattggaa agatcaattc gactggcgcg cccaggaggc cgcgctgaac gcgtttcccc
     3061 aattcaaggt ggcaatgccg gatgtcgatc tgcactacct gcacgtgccg ggtgtcggcc
     3121 cgtcgcccac gccattgctg ctgatgcatg gctggccggg gtcggtgttc gagttcgtcg
     3181 acatcatccc ccgcctgacc gatcccgccc gtttcggtgg cgatccggcc gacgcgttca
     3241 ccgtcgtcgc accgtcgtta ccgggatacg gcttgtcgtt caaaccgaac cagaaacgtt
     3301 tcaacatcga ggctatcgcc gcctgcttcg cctcactgat gaccgacgtt ctcggctata
     3361 cgcgctatgc ggcgcagggt ggcgattatg gagcgttcac cgcgtcgcgg ctggggcatt
     3421 cgcacgccga aaacctgatc ggcatccata tcaacctgct gaccatcccg cgcgaccgag
     3481 cgccaccggc caacccgacg gaggaggagc ggcggtattt cgcggaactc gcggcgtggc
     3541 tgaaggagga aaccggctac cagtggatcc agggcaccaa gccgcaaacc ctggcctatg
     3601 ggctgacgga ttcaccggcg gggctcgccg gctggatcgc ggagaagttc cgcacctgga
     3661 ccgattgcga cggcgatccc gaatccgtca tcagccgcga tcacctgctg gcgaacgtgt
     3721 cactctactg gttcactggc gcgatcgggt cgtcgttctg gccatactat gctcggatgc
     3781 acggtccgtg gccgattccc gccggcggga cggtcgatgt gccgatgggc tactgcgcct
     3841 ttccgaagga aatcatccgg ccgccccgtt cgatcgcaca gcagacatat accaatatcc
     3901 agcgctggac cccgatgccc aaaggcggcc acttcgccgc gatggaacag ccggaagccc
     3961 tcgccacgga gatacgcgcg tttttcaaag ggctgaggta ggaagggcgg gctctgcccg
     4021 aacccgcaaa gggccggcgg ccctttgatc ccattcattt agggtgggtg gctaggaggg
     4081 ggcaactcag gtgtcgcagc cgacacggtc gccccctcct agccacccac cctagaccgg
     4141 ggttccaagg gcggtccgcc cttggtgggg tgcggggcaa aggcccgccc ttccttacct
     4201 cagaactttg aaacgcgggt ttctttcgcg gtgatgaact ccagcagggc tggtttgccc
     4261 gcctgggtct gttcgatacc gcgctggatc gccgccttga tgtcgcccgg ttgcgtc
//
LOCUS       DATAVD010000423         1608 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2646090, whole genome shotgun sequence.
ACCESSION   DATAVD010000423 DATAVD010000000
VERSION     DATAVD010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2646090"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            142..1143
                     /locus_tag="VHX39_07900"
     CDS             142..1143
                     /locus_tag="VHX39_07900"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HEX3991080.1"
                     /translation="MLNRRITLQSRPTGIPGAAHFTQDEVAVRPLEAGELLVETMYIS
                     IDPAMRSWIADTSGYARGVAIGNVMRAGGIGRVLQTTVESFAIGDLVQGRTGWQSHPI
                     LRARDTQKLDLALGSLDDWMGPLGTSALTAYFGVRDIGALKPGETLLVSAAAGGVGQI
                     AAQIGMIDACRVIGTAGGPDKCQFLRQTLGLHGVIDYKAENDLEAAIRRECAGGVDVY
                     FDNVGGPTLDAALANLRTDARVVLCGRISQTVAAEPYGVRNLGRLGGRRITMRNFLVF
                     DYHDRYAEARTWLSAQIRDGRLQQKLHIVNGLENAPTALGMLFRGENTGKLVIKAAG"
BASE COUNT          320 a          463 c          504 g          321 t
ORIGIN      
        1 gctcatgttt cctcccatta tcgggtctga ccgctgacag catgccgtcg gccgccgcaa
       61 cctgtcgagg tccggtgcac caattggcgg accggcaaca gcctgcttca atgccgcaac
      121 tgaattttgg gagcgcgtgc catgttaaac cgccggatca cgttgcaatc gcgacctacc
      181 ggcattccag gggccgcgca tttcacccag gatgaagtgg cggtgcggcc gctcgaagcg
      241 ggcgaattgc ttgttgaaac catgtatatt tccatcgatc cggcgatgcg atcctggatc
      301 gctgatacgt ccggctatgc ccgaggcgtt gcaattggca atgtgatgcg cgccggtgga
      361 attggccgtg tcctgcaaac cacggtggag agttttgcga tcggagacct ggtgcaagga
      421 cgcaccggct ggcaatcgca tccgatcctg cgcgcgcgcg acacacagaa actggatctt
      481 gctttgggtt cgctggacga ctggatgggt ccgctcggca cctccgcgtt gacggcgtat
      541 ttcggcgtac gggacatcgg cgcattgaaa cccggggaga cgttgctggt ctcagcagcc
      601 gcaggtgggg tcgggcaaat cgctgcccaa atcgggatga tcgacgcctg tcgggtgatc
      661 ggcaccgccg gagggccgga caaatgccaa ttcctcaggc aaacgctcgg tttgcatgga
      721 gtgatcgact acaaagccga aaacgatctc gaggcggcaa ttcggcgtga gtgcgccggc
      781 ggggtcgatg tctacttcga caacgttggt ggcccgacat tggatgcagc actggccaat
      841 ttgcggaccg acgcgagggt cgtactctgt ggacgaattt cccagaccgt tgcggccgag
      901 ccgtacggcg ttcgcaattt ggggcgtctg ggcggtcgac gtatcacaat gcggaacttc
      961 ctcgtcttcg attaccacga tcggtatgct gaagcgcgca catggctgtc ggcacagatc
     1021 cgcgatggtc gccttcagca gaaacttcac atcgtaaatg ggttggagaa cgcaccgact
     1081 gcgttgggga tgctgttccg aggcgaaaac accgggaagc tggttatcaa ggccgccggt
     1141 tgaccccgct tcgcaaccac gacggccgcc tggcgaaata gccgggccaa tcttaaggtg
     1201 acacgcgggt ccacaagtac cagaacgtgt gcttcccgcc atcgccgcca ggacccttct
     1261 gccggaactg tcgaatttcg gcgcaaccgc tgcattagct gctgctgcat gcgtcggttc
     1321 cacccaggcg gcatgcggtg agacaaagga ttccaggctg tcacgaagac gccggcgcgt
     1381 gagttgtgtg tggccaacaa ttggtccatc gccggtgacc ggcggccaat ccgtacttca
     1441 actttgcccg cggtgtaggt tgtcttgcgg taggcgttca acaagcgcgc gggtcgtgtc
     1501 atcagtcgcc gtctgaaccg agggacggat cattgtccga agtcaagcaa ccggaaacat
     1561 caatgccatg atgactccaa cgcggcgtcg gatacgcggg aatcaata
//
LOCUS       DATAVD010000424         1596 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_970511, whole genome shotgun sequence.
ACCESSION   DATAVD010000424 DATAVD010000000
VERSION     DATAVD010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_970511"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1121)
                     /locus_tag="VHX39_07905"
     CDS             complement(<1..1121)
                     /locus_tag="VHX39_07905"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3991081.1"
                     /translation="MTDAIEASAIRKVYMRLLPIALLTYFLCYVDRINVGFAALTMRG
                     DLHMSATDFGFAAGTFYWGYFLFEVPSNVIMEKVGARIWIARIMITWGILAGATAFAT
                     GSTSFAVIRFFLGLAEAGFFPGLILYFTYWFPHYHHARIVSGFLVALPIAVAAGSPLS
                     TAILGLDGWLGLRGWQHMYLLEGIPTVLIGIVVLFVLTDRPEQATFLTAEEKHWLATR
                     LAAEKKAKDDVKKISMWQSFFNPQVILLSINYLGIVTASLGLLLFAPQIIKSLGVSSN
                     MTVGWLTMVPYLCAAVSLVVWGWLSDRMKERRWNLFFACVMSTVGLVIAGATMGTWWA
                     MVGMTIATCGFYGSKGPFWAMPPMFLTGPAAAAAIAWINS"
     gene            complement(1182..>1596)
                     /locus_tag="VHX39_07910"
     CDS             complement(1182..>1596)
                     /locus_tag="VHX39_07910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX3991082.1"
                     /translation="PDSGGAGRTRGGMGQIMQIATKGDLEFAVNASFDRIANAPRGRE
                     GGLNGAAGRVAEKTGKLLRTKGFQIIPDGERLILELPGGAGMGDPTQRDPLTVARDVR
                     DGLVSVENARALYKVVVTTAGAVDEAETTRIRLHS"
BASE COUNT          311 a          522 c          494 g          269 t
ORIGIN      
        1 gagttgatcc aggcgatcgc cgcagccgcg gccggcccgg tcaggaacat cggtggcatc
       61 gcccagaacg gacccttgga gccgtagaac ccgcaggtcg cgatcgtcat cccgaccatg
      121 gcccaccagg tccccatcgt cgcgccggcg atcaccagcc cgaccgtgga catcacgcag
      181 gcgaagaaca ggttccaccg ccgctctttc atccggtccg acagccatcc ccagacgacc
      241 agtgacaccg cggcgcagag atagggcacc atcgtcagcc agccgaccgt catgttgctg
      301 ctcacgccca gggatttgat gatctgcggg gcgaagagca gtaacccgag gctggccgtg
      361 acgatgccca ggtagttgat cgaaagaaga atgacctgcg gattgaagaa cgactgccac
      421 atgctgatct tttttacgtc gtccttcgcc ttcttctccg cggcgaggcg cgtggcgagc
      481 cagtgctttt cctcggccgt caggaacgtc gcctgctccg gcctgtcggt cagcacgaac
      541 agcacaacga taccgatcag caccgtggga atgccttcca gcagatacat gtgctgccag
      601 ccgcgcaggc cgagccagcc atccaggccc agtatcgccg tggaaagcgg cgagccggcc
      661 gccaccgcga tcggcagggc gaccaggaag cccgatacga tccgcgcatg atggtagtgc
      721 ggaaaccaat aggtgaaata caggatcagg cctgggaaga agccggcttc ggcgaggccc
      781 aggaaaaacc ggatcaccgc gaagcttgtc gatccggtgg caaacgcggt cgcccctgcc
      841 aggatgcccc aggtgatcat gatgcgcgcg atccagatgc gcgcgccgac tttctccatg
      901 atcacgttgc tgggcacttc gaagaggaag tagccccagt aaaacgtgcc ggcagcgaat
      961 ccgaaatccg ttgcgctcat gtgcaggtcg ccgcgcatgg tcagcgcggc gaagccgaca
     1021 ttgatacggt ccacatagca aaggaaatag gtcagcaggg cgatcggcag caggcgcata
     1081 tacaccttgc ggatcgccga tgcctcgatg gcgtcggtca ttgaagtctc cctgttcgcc
     1141 ttttttgcag gcttgtaaca gggagcctat gcgcaggccg gttagctgtg caagcgaatc
     1201 cgcgtggttt cggcctcatc caccgcaccg gcggtggtca cgacgacttt atacagcgcg
     1261 cgggcgttct cgacagagac caggccatcg cgcacgtcac gcgccacggt caggggatcc
     1321 cgctgcgtcg gatcgcccat gccggcccca ccgggcagtt ccaggatcag tcgttcgcca
     1381 tcgggaatga tctggaatcc cttggtacgc agcagcttgc cggttttctc cgcgacccgg
     1441 ccggccgcgc cgttcaggcc gccctcccgg ccacgtggcg cattggcgat gcggtcgaaa
     1501 ctggcgttga ccgcgaattc caggtcgccc ttggtggcga tctgcatgat ctggcccatg
     1561 ccgccgcggg tgcggccggc accacccgag tccggc
//
LOCUS       DATAVD010000425         3020 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2460320, whole genome shotgun sequence.
ACCESSION   DATAVD010000425 DATAVD010000000
VERSION     DATAVD010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3020
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2460320"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..598
                     /locus_tag="VHX39_07915"
     CDS             176..598
                     /locus_tag="VHX39_07915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucR family transcriptional regulator"
                     /protein_id="HEX3991083.1"
                     /translation="MTEDVLALTAQIVSAHVTKNTVDVGDLPALIRDVFRTLSTLGDA
                     APAPVPEATKPVVPAARSVFASHIICMECGKKMTMLKRHLMTEHGLTIDQYRAKYNLP
                     GTYPMVAPDYAKTRSSLAKEMGLGKSRSAAPKKAARRK"
     gene            complement(640..1431)
                     /locus_tag="VHX39_07920"
     CDS             complement(640..1431)
                     /locus_tag="VHX39_07920"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX3991084.1"
                     /translation="MTEERQYVDYERNGSIVTIAMNRPEKLNAVSDEVVRQLMTAFRQ
                     FDADPEAHVAILCGRGRAFCSGADVHQRQLRSREEFERLGGPQGHGANSGDLLMQSVN
                     WKPVIAAVHGYVLGLGLGMVLDCDLIVAEAGTKFHLTETSRGLGSAKQWAQLHFRSGA
                     FADEIALTGRYFTAEEALAANVINRVAPTANVMAMAQELAEAVAANPPLSVRATVRTR
                     RWRLGQAVREAAFQQAPMRLYLTEDFHEAALAFKEKRKPRAFKGR"
     gene            1505..2293
                     /locus_tag="VHX39_07925"
     CDS             1505..2293
                     /locus_tag="VHX39_07925"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX3991085.1"
                     /translation="MPLLYEKRGHVAVLTLSRPEARNAWCAEYNERFIELLPALEDDR
                     DIRCVVLTGDPAGNAFSAGADLKNPKTHTHDSIADFIEEVPSRRRQSAIALVTDFSKP
                     IIAAVNGYAIGIGCIVTYCCDMIVASEAAEWRLPQAGLGIIPAQGGTIRLARWVGKGQ
                     AMRAALGFPMHADEAFRIGLAQWLVPPAALMDKAMEVANHIASLPPLAARLTKESLRS
                     GLEQPLPEAVLGDLYRFAMLEMTEDKAESHRSWRERRRPDFKGR"
     gene            2296..>3020
                     /locus_tag="VHX39_07930"
     CDS             2296..>3020
                     /locus_tag="VHX39_07930"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3991086.1"
                     /translation="MAMPLSGVTVLDFGQIFQGSYATLLMAKAGANVIKIEPLGGEPL
                     RRRTPPGDTTTLPFAMLNANKRGVTLNLKAEKGRALLFEMVKRADVVLENFAPGTMDA
                     LGIGWSVLHPLNSRLIYATASGYGISGPNRSDLAMDLTVQAASGIMSVTGFADGPPVR
                     TGVTVADFMGGIHAYGAIMTALYEREHSGIGRLVEVAMQEAVYFTLAGPMEQYRRRGT
                     VPPRSGNGAGGATAPYGVFEVKDG"
BASE COUNT          571 a          895 c          985 g          569 t
ORIGIN      
        1 cgttcagacc gagatccatt ccggcgttcc ccacgtgcct gctcgacaag catgccggga
       61 ttggcgaaaa ggagcaactt tccgcgagat tccgtgtcgc agatcacaac agaaacttgg
      121 aactcgtgcg aggttcgggt actttgaagc aacctaacga acaggaaaag accgtatgac
      181 agaggatgta ttggccctca cagcgcaaat cgtcagcgcc catgtgacga agaacaccgt
      241 ggatgtcgga gacctgccgg cacttattcg tgacgtcttc cgcacacttt cgacgttggg
      301 cgacgccgcg cccgctccgg tgccggaggc gacgaagccg gtggtgcctg ccgccagatc
      361 ggtctttgcc tcgcacatca tttgcatgga gtgcgggaag aagatgacca tgttgaaacg
      421 tcatctgatg accgaacatg gactgacgat cgatcagtat cgggcaaagt acaatctgcc
      481 gggaacctac ccgatggttg cacccgatta cgccaaaacc cgttcctccc tcgccaagga
      541 aatgggactg ggcaagagcc ggtccgcggc accaaagaag gccgcgcggc gcaaatagag
      601 gaattgtgga cctggccata cctcaggggc ggggtgtggt cagcgtccct tgaatgctct
      661 gggcttgcgt ttttccttga acgccagggc ggcttcgtgg aaatcctcgg tcaggtaaag
      721 ccgcatcggg gcctgctgga acgccgcctc gcgcactgcc tgaccaagcc gccaccgccg
      781 tgttcgcacc gtcgcacgaa cactcaacgg cgggttggct gcgacggctt cggcaagctc
      841 ctgcgccatc gccatgacgt ttgcggttgg cgccacgcgg ttgatcacat tggcagccaa
      901 tgcctcctcg gccgtgaagt aacgtccggt caaggcgatc tcgtcggcaa aggcgccact
      961 gcggaaatgc aactgcgccc attgcttggc cgaaccgagg ccgcgcgagg tctcggtcaa
     1021 gtggaacttc gttccggcct cagcaactat cagatcgcaa tccagtacca tgcccagtcc
     1081 gaggccgaga acatagccgt ggacggcagc gatgacgggc ttccagttga ccgactgcat
     1141 cagcagatcg ccggaattgg cgccgtggcc ttgtggcccg cccagtcgct cgaattcttc
     1201 gcgggagcgg agttggcgct ggtggacatc ggcaccgctg cagaacgccc ggccgcgccc
     1261 gcacaggatc gcgacatgcg cttccgggtc ggcatcgaac tgccggaacg cagtcatcaa
     1321 ctggcgcacg acctcgtcgc tgacggcatt cagtttctcg gggcggttca tcgcgatggt
     1381 gacgatgctg ccgttgcgtt cataatcgac gtattggcgt tcctcggtca ttcctcgtcc
     1441 ccgtggcttt ttcgggctcc gggtgtaccg tagcgacgcc agaggggaaa gagggaacgg
     1501 tccgatgcca ttgctgtatg agaaacgcgg tcacgttgcg gtgctgacgc tgagccggcc
     1561 ggaagcgcgc aacgcatggt gtgccgaata taatgagcgg ttcatcgagt tgctgcccgc
     1621 gctggaagac gaccgcgaca tccgctgcgt cgtgctgacc ggcgatccgg caggcaacgc
     1681 gttcagcgcc ggtgccgatc tgaagaaccc gaaaacccac acccatgact cgattgccga
     1741 cttcatcgag gaagtgccaa gccgccgccg tcagagtgcg atcgctctgg ttaccgactt
     1801 ttccaagccg atcattgctg cagtgaatgg ttacgcgatc ggcatcggct gtatcgtcac
     1861 ttactgctgc gacatgatcg tcgcgtccga ggcagcggaa tggcgcttgc cgcaggccgg
     1921 cctggggatc atcccggcgc aaggcggtac catccgcctc gcccgctggg ttggcaaagg
     1981 tcaggcgatg cgtgccgcac tgggctttcc gatgcacgcg gacgaggcgt ttcgcatcgg
     2041 gctcgcgcaa tggctggtac cgccggcggc gttgatggac aaggcgatgg aggtggcgaa
     2101 ccacatcgcc tcgctgccgc cgctggccgc aaggctgacc aaggaatcgt tgcgctcggg
     2161 tttggagcag ccgttgccgg aggcggtact cggcgatctg taccgctttg cgatgttgga
     2221 gatgaccgag gataaagcgg aaagtcaccg ctcctggcgg gagcgccgca gaccagactt
     2281 caaaggacgc tgatcatggc gatgccgctt tcgggtgtga cggtactgga ttttggccag
     2341 atatttcagg gatcctatgc cacgctgctg atggccaagg ccggcgccaa tgtgatcaag
     2401 atcgagcctc tgggtggcga accattacgg cggcgcacgc cgccgggcga cacgacgacc
     2461 ttgccgttcg ccatgctgaa cgccaacaag cgcggggtga cgttgaattt aaaggcggag
     2521 aagggccgcg cgctgctgtt cgagatggtg aagcgggccg atgtcgtgct ggagaatttc
     2581 gctcccggca ccatggacgc tttgggtatt ggctggtcgg tgctgcatcc gttgaactcg
     2641 cggctgattt atgcgaccgc ctctggttac ggcatcagcg ggccgaaccg gtccgatctg
     2701 gcgatggatc tgaccgtgca ggctgcctcc ggcatcatga gcgtcaccgg atttgccgat
     2761 gggccgccgg tgcggaccgg cgtgacggtc gccgacttca tgggcggcat ccatgcttac
     2821 ggcgccatca tgactgcgtt gtacgagcgc gagcacagcg gcatcgggcg gctggtcgag
     2881 gtcgccatgc aggaggcagt gtatttcacc ttggccggtc cgatggaaca ataccgtcga
     2941 cgcgggacgg tgccgccgcg cagtggcaat ggcgcaggcg gggcgacagc gccgtacggc
     3001 gtgtttgagg tgaaggatgg
//
LOCUS       DATAVD010000426         2620 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_786437, whole genome shotgun sequence.
ACCESSION   DATAVD010000426 DATAVD010000000
VERSION     DATAVD010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2620
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_786437"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            610..843
                     /locus_tag="VHX39_07935"
     CDS             610..843
                     /locus_tag="VHX39_07935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991087.1"
                     /translation="MRSSAGLVCTCWHTEARAQRREEALALFGNGLTHRNPLGLRPDD
                     IAPDNGTLWGNLSQTWSRIGRIFAGTEGMWHAS"
     gene            828..2237
                     /locus_tag="VHX39_07940"
     CDS             828..2237
                     /locus_tag="VHX39_07940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
                     /protein_id="HEX3991088.1"
                     /translation="MARLVIVSNRVPAPFERGPRAGGLEVALADALRPGSLWLGWSGR
                     RNAKPADTPEMAQADGITYATVDMTEAEYRAYYVGFANGALWPLLHFRLGLMTYRRED
                     FQGYCAVNRRFAAALAKVLQPDDLIWVHDYHLIPLAQELRLLGVRNRVGFFLHIPFVP
                     PVMLEVLPCARELLEGLAAYDVVGFHTEAYRLAFLQCVRQLLGVAPRHNSFVHNGAKV
                     DAIVDPIGIDTETFAKDALRVAHGAESRRLRDSMGDRALAIGVDRLDYSKGLPNRLIG
                     FGRLLATYPEHRRKVNFLQVAARSREDNSDYQQIRRELDRIAGNINGSYSEFDWIPLR
                     YITRALSRSTLAGFYRIARVGVVTPLRDGMNLVAKEFIAAQNGSDPGMLVLSRFAGAA
                     EELTEALIVNPFDPDEIAAAVHRALTMELEERRARQKTLLEKVHRSNARRYCEVFLRH
                     LMANERDQSVAAVVRMIAG"
     gene            2553..>2620
                     /locus_tag="VHX39_07945"
     CDS             2553..>2620
                     /locus_tag="VHX39_07945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEX3991089.1"
                     /translation="MQVLVRDNNVDQALKALKKKMQR"
BASE COUNT          503 a          746 c          874 g          497 t
ORIGIN      
        1 atggccgggg acccagtacg ggccattcca gtgcggtcgg atccaggccc ggccgggaac
       61 aacgggcggc ggcgcataga caaccggagg tgcaacggca acgacgggcg gagcgacacc
      121 gacgacgacg cccggagccc aacagcagcc gcgttttgtt ttgcggacat aatgtatttc
      181 cggtggttcc gaagtgatcg attcaagaat gaacggctaa atcaatcatg gaaggtgcgc
      241 gatttcccga tatggcgccg gaggtttccg gcggttccgt tggtcgcgat caactccggg
      301 agtccgaaga accttacgct cagtagattc agatgctatc gtcctcggcg cggtaggatg
      361 caggccggat atatcggccc gttcagggct tcaaaaacca ccatcggcgc gataatccca
      421 tcgcaccgaa atgccgccgc gaaggtctcg ttgttcccat ggtcgggcgc gccttcggaa
      481 gccaaaggaa actggccggc caattgcgac aacagatctt cggatgaggt cacgacaaat
      541 cacgctcagg ggagcagcga cgaaatgatt gagatctcgg atgttggcaa cgccaagggg
      601 tcataaggaa tgaggagcag tgcaggcctc gtgtgcacgt gctggcacac cgaagcccgc
      661 gcccagaggc gcgaggaagc gttggcgttg ttcgggaacg gcctgacgca ccgcaatccg
      721 ctcggcctgc ggccggacga cattgcccca gataatggca cgttgtgggg caatttatcg
      781 cagacctggt cccggatcgg ccggattttt gcggggacgg agggcatgtg gcacgcctcg
      841 taatcgtttc taaccgggtc cctgcgccgt ttgaacgtgg gccgcgggcc ggcggcctgg
      901 aggtggcgtt ggcggacgcg ttgcggcccg gttcgctgtg gcttggctgg agcgggcggc
      961 gcaacgcgaa accggcagat acaccggaaa tggcgcaggc ggacggcatc acctacgcca
     1021 ctgtcgacat gacggaagcg gagtaccgcg cctactacgt tggcttcgcc aatggcgcgt
     1081 tgtggccgtt gctgcacttc cggcttggcc tgatgaccta tcggcgcgag gactttcaag
     1141 gctattgcgc cgtcaatcgc cgcttcgccg ccgcgcttgc caaggtattg caaccggatg
     1201 atctgatctg ggtgcacgac taccacctga taccgctggc ccaggagttg cggcttctgg
     1261 gggtaagaaa ccgggtcggg ttcttcttgc atatcccgtt tgtgccgccg gtgatgcttg
     1321 aggtactgcc ctgcgcgagg gagctgctgg aagggctggc ggcctatgac gtggttggct
     1381 ttcataccga ggcgtatcgc ctcgctttcc tgcaatgtgt gcggcagctg cttggcgtgg
     1441 cgccgcggca taactcgttc gtccacaatg gcgccaaggt cgatgccatc gtggacccga
     1501 tcggcatcga taccgagacg ttcgccaagg atgccctgcg ggtcgcgcat ggggcagagt
     1561 cgcggcggct gcgcgacagc atgggggacc gcgcgctggc gatcggcgtg gaccggttgg
     1621 actactccaa gggcctaccc aatcgcctga tcggcttcgg ccggctgctg gccacgtatc
     1681 ccgagcatcg ccgcaaggtg aatttcctcc aggtcgccgc ccgttcgcgg gaggacaaca
     1741 gcgactacca gcaaatccgc cgcgaattgg atcgtatcgc gggcaatata aacgggagtt
     1801 attcggaatt cgactggatc ccgttgcgct acattacgcg cgcgctgagc cggagcactc
     1861 tggccggttt ctatcgtatc gctcgcgtcg gcgtcgtgac gccgctgcgt gacgggatga
     1921 acctggtggc aaaggaattc attgctgcac agaacggatc agatcccggc atgctggtgc
     1981 tgtctcggtt tgccggcgca gcggaggaac tgaccgaggc actgatcgtc aacccgttcg
     2041 atccggacga aatcgctgcg gcggttcacc gggcgctgac catggaactg gaggagcgcc
     2101 gcgcccggca aaaaacgctg ctggagaagg ttcaccggtc caatgcgcgg cggtactgcg
     2161 aggtgttcct gcggcacctg atggcaaacg agagggatca atcggttgcg gctgtcgttc
     2221 ggatgatcgc aggttgagca ggcggtttcc gatcagggtg ccccacggac cgtacccgtc
     2281 gttgttgggg tggacggcgt cacgtgccag agttgggact gttggaacac ctcggccaac
     2341 atctcgatcc gaaggaaacg caagcggtcc gggtggtccg acgagttcgc tcgatccctc
     2401 ccgggtcgaa tgcgatagcc ctgcgaaaaa gcttgtgctg cctggcaggc atgatatgta
     2461 tcggaaatag ccgcacggga atctggtcat cgttggccgg atgctgtgtg attcggtaag
     2521 ttggcggcac cactgatcag gagacgggct tcgtgcaagt cctagttcgc gataacaacg
     2581 tcgaccaggc gctcaaagcg ctcaaaaaga agatgcagcg
//
LOCUS       DATAVD010000427         2970 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_597668, whole genome shotgun sequence.
ACCESSION   DATAVD010000427 DATAVD010000000
VERSION     DATAVD010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2970
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_597668"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..646
                     /locus_tag="VHX39_07950"
     CDS             <1..646
                     /locus_tag="VHX39_07950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3991090.1"
                     /translation="PAERSARVEAMLAAVGLDASALRRYPHEFSGGQLRRVALARILL
                     LRPQLLILDEPTSGLDMSVQATVLNLLLELRAKFGLTYLFISHDLSVVERLSDRVAIM
                     YLGRIVETALTREVFARPAHPYTRSLLAAAPRLDRTNRRDRVRLDGDPPGHSHLPPGC
                     AFFGRCPNAVEQCGTVPPPLQSIAPDHDVACHFAATETAPVARRVCATDTVVPQ"
     gene            complement(662..2239)
                     /locus_tag="VHX39_07955"
     CDS             complement(662..2239)
                     /locus_tag="VHX39_07955"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease/ATP-binding
                     protein"
                     /protein_id="HEX3991091.1"
                     /translation="MHFLTYMASPFLLRGALLALKIAALAMVLGLLLGLLLALARLSR
                     HSAIRGAAWFYIWLMRGTPLLLQLVFIFDVLPSIGLTLDTFTTAVVGFSLNEAAFSAE
                     IIRGGILAVNRNQGVAAAALGMPPLLTLRRIILPQAMRSILPGIANQSISMIKGTSIA
                     SVIFVNELTFNAEQIVGQNFQFFQVFAAAGLIYLIMTSAIALGQIALERHFDFLRDEG
                     DGFAQRAWSLLGIGRAPLPELPLAHGGRERLPALIGELCRDIASAEGPSVICHNVQKS
                     YGGREILQGIDLTVNAGEVVVIMGPSGSGKSTLLRMINHLEPLDWGEITVNGQLVGYE
                     PLPGGGVRPVRKRLAQARAAARIGMVFQHFNLFEHLTALENVIEAPLMVYHQRPEEAR
                     AAALRLLAAVGLGRHVGHLPHRLSGGQQQRVAIARALAVAPRVMLFDEPTSALDPELV
                     GEVLAVIRGLAEAGMTMIIVTHEVRFAREVADRILFMDDGVIVEQGPPAAVLDRPVQD
                     RTRRFLRMVEKVEEAVV"
     gene            complement(2280..2699)
                     /locus_tag="VHX39_07960"
     CDS             complement(2280..2699)
                     /locus_tag="VHX39_07960"
                     /inference="COORDINATES: protein motif:HMM:NF013331.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group 1 truncated hemoglobin"
                     /protein_id="HEX3991092.1"
                     /translation="MDEPSGQHSLFLRLGGASGLARLIDRQYEQLLADDYLGEYFMGA
                     DIGRLKTAQLGFLRTMFGDAEASYHGTPLRQAHHDQLVTEHAFDQFVDMFVTAAREAG
                     VDDADQTEIRALLKSLRANVITEFKPNPAYDYQSKPF"
     gene            complement(2713..>2970)
                     /locus_tag="VHX39_07965"
     CDS             complement(2713..>2970)
                     /locus_tag="VHX39_07965"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3991093.1"
                     /translation="GRVDVMLSNAVIAAAIAEQKPLLEAGFSFLPGIKVGVAVAKGHT
                     ELEHALSDAIAAVQASGEMAKIYEHYKLDPAWIRPPEILTQ"
BASE COUNT          602 a          944 c          867 g          557 t
ORIGIN      
        1 cccggccgag agatctgcgc gtgtcgaggc gatgttggcc gcggttggtt tggacgcatc
       61 tgccctccgc cgctatccgc acgagttttc cggcggacag ctgcgccggg tcgcgctggc
      121 gcggatcctg ttgctgcgcc cacaactgct gattttggat gagccgacat caggactgga
      181 catgtccgtc caggcgactg tcctgaacct gctgctcgag ttacgcgcca aattcggcct
      241 gacctatttg ttcatatcgc acgacttatc ggtagtggag cggctgtcgg accgagtggc
      301 gatcatgtat ctcggccgca tcgttgaaac ggcactgaca cgggaggtct ttgcgcggcc
      361 ggcacatccg tacacacggt ctttgttggc ggcggcgcct cggctggatc ggaccaaccg
      421 ccgagatcgc gtgcggctgg acggtgaccc gccgggccat tcacatctgc ctcccggatg
      481 cgcgtttttc gggcggtgtc cgaacgcggt cgaacagtgc ggaacggtcc ctccgccgct
      541 gcaatctatc gcgccggatc atgatgtggc ctgccatttt gccgcaaccg agactgcacc
      601 ggtcgccagg cgggtttgcg cgaccgatac ggtcgtgccg caataatcca acgcgcctgt
      661 gtcagaccac cgcttcctcg accttttcga ccatgcgcag gaaacgccgc gtgcggtcct
      721 gtaccgggcg gtccagcacc gcggcaggcg gcccttgctc cacgatgacg ccgtcatcca
      781 tgaacaggat gcgatcggcg acctcacggg cgaagcggac ctcgtgcgtc acgatgatca
      841 tggtcatgcc ggcctcggca agtccgcgaa tcacggccag cacttcaccc acaagttcgg
      901 gatcgagcgc cgacgtcggt tcatcgaaca acatcacccg cggcgccacc gccagcgcgc
      961 gagcgatcgc cacccgttgt tgttgtcctc cggacagacg gtgcggcaaa tgaccgacat
     1021 gccgccccag accgactgcc gcgagcaaac gcaaagcggc tgcacgcgcc tcctccggtc
     1081 tctgatgata aaccatcagc ggcgcttcaa tgacattttc cagcgcggtc agatgttcga
     1141 acaaattgaa gtgctgaaag accatgccga tgcgcgccgc ggcacgggcc tgtgccagtc
     1201 gtttccgcac cggccgtacg ccgccaccag gcaatggttc gtagccgacg agctgaccgt
     1261 tgacggtgat ctcaccccag tccagcggct ccagatgatt gatcatgcgc aacaacgtac
     1321 tcttgccgga gccgctcgga cccatgatca ccacgacctc gccggcgttc acggtcaggt
     1381 cgatgccctg cagaatttcc ctcccgccgt atgacttctg cacattgtgg caaatcacac
     1441 tggggccttc ggcagaggcg atatcgcggc acaattcgcc gatcagcgcg ggcagccgtt
     1501 cgcgtccgcc gtgggccaga ggcagttccg gcagcggtgc ccgaccgatt cctaaaagcg
     1561 accaggcacg ttgcgcaaat ccgtcgccct cgtcgcgcag aaagtcgaag tgccgttcca
     1621 gggcaatctg tcccagggca atcgccgagg tcatgatcag ataaatcagc ccggcggcgg
     1681 cgaagacctg gaagaactga aaattctggc caacgatctg ttccgcgttg aaggtcagct
     1741 cgttgacgaa gatcaccgat gcgatcgagg ttcccttgat catactgatc gactggttgg
     1801 cgatacctgg caggatcgat cgcatcgcct gcggcagaat gatccgccgc aaagtcagca
     1861 acggcggcat gccgagcgcg gctgccgcga ctccctggtt ccgattgact gccaatatcc
     1921 cgccgcgaat gatttccgcg ctgaatgctg cttcgttcaa ggaaaatccg accaccgcgg
     1981 tggtgaacgt gtcgagcgtc aggccgatcg acggcaacac atcgaaaatg aacaccagtt
     2041 gcagcaacaa aggtgtcccg cgcatcaacc agatatagaa ccacgctgca ccgcgaatgg
     2101 cggaatgccg cgacagccgc gccaatgcca acaaaagtcc aagcagcaat cccagaacca
     2161 tcgcaagcgc ggcgatcttc aacgcaagca gcgcgccgcg cagcaggaac ggcgatgcca
     2221 tataggtcag gaaatgcatg gcatacctgc gacgttacgg caccacggag aggacctggt
     2281 caaaacggct tcgactgata atcgtatgcc ggatttggtt tgaattcggt gatcacattg
     2341 gcgcgcaggg atttcagtaa cgcgcggatc tctgtctgat cggcatcgtc gactccggct
     2401 tcgcgcgcag cggtcacaaa catgtcgacg aactgatcga acgcgtgttc cgtcaccaac
     2461 tgatcgtgat gcgcctgccg caacggggtg ccgtggtatg acgcctccgc gtcgccgaac
     2521 atcgtgcgca aaaaccccag ttgtgcggtc ttcagtcggc cgatgtccgc gcccatgaaa
     2581 tattcgccga gataatcgtc ggccagcaac tgttcgtatt gccgatcgat caaccgtgcg
     2641 agaccggacg caccgccgag acgaaggaag agactgtgct ggccggaagg ctcgtccatg
     2701 tcgcaaacct cattattgcg tcaggatttc cggcggcctg atccacgccg ggtcgagctt
     2761 gtaatgctca tagatctttg ccatctcgcc gcttgcctga actgcggcta ttgcatcact
     2821 caaagcatgc tcaagttcgg tgtggccttt cgccaccgcg acaccgacct tgatacccgg
     2881 cagaaagctg aagccggctt caagcaacgg cttttgctcg gcaattgcgg cggcgatcac
     2941 agcgttggaa agcatgacgt cgacgcgtcc
//
LOCUS       DATAVD010000428         1901 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3390687, whole genome shotgun sequence.
ACCESSION   DATAVD010000428 DATAVD010000000
VERSION     DATAVD010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3390687"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..957
                     /locus_tag="VHX39_07970"
     CDS             <1..957
                     /locus_tag="VHX39_07970"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3991094.1"
                     /translation="AMTSTAILASYGRSNAADDSGLLDEFADGVIAENPVHANFLAAS
                     RVALSDENRGELIGYLNYCLGRGLTMAYLVDCYNTIVIDTQMEQLYFRKHNRYRCSSF
                     KEVADRVYFDTDYMSKYMYGLAITSFLWPNHTAMYAFFVGTFPTGARGTYLEIGPGHG
                     YYFRQAGILGNFDRMVGVDISAASIALTKDIVERLGVKSHAKIELIESDFLKMADDEL
                     GCSCIVMGEVLEHVEDPAMFLRAIARRSRPDTHVFITTCVNAPAIDHISLFRTPGEVE
                     DLIQANGLHIVEALGVPYAGKTLQECEAQRLAVNVAYTLRKA"
     gene            954..1400
                     /locus_tag="VHX39_07975"
     CDS             954..1400
                     /locus_tag="VHX39_07975"
                     /inference="COORDINATES: protein motif:HMM:NF025050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3991095.1"
                     /translation="MTPFNLTFHHLGLAVRRPNEALSFLQGLGYRCAEPVFDGLQNVH
                     LIMCAHQAMPAVEIIYPGAGTTPIDGYLARQPNGLVYHACYGSPDLAESLAQWEAAGI
                     AAVCVSEPKPAILFGGRKVSFYNVLGVGLIEIIETEAGPATALMSA"
     gene            1692..>1901
                     /locus_tag="VHX39_07980"
     CDS             1692..>1901
                     /locus_tag="VHX39_07980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991096.1"
                     /translation="MNVGTGPDDGLVEVTSGTPALFGPAVTAGAGVAAATVAGAVVGA
                     AGCAACCGGAAATVVDAVPPLLGVPP"
BASE COUNT          322 a          588 c          610 g          381 t
ORIGIN      
        1 gccatgacca gcaccgccat cctggccagc tacggcagat cgaacgcggc cgatgactcg
       61 ggactgctcg atgaattcgc ggacggcgtg atcgcggaaa atcccgtcca tgccaatttc
      121 ctggcggcct cccgggtggc gttgtcggac gagaatcgcg gcgagctgat cggctatctc
      181 aactattgcc tcggccgggg gctgaccatg gcttacctgg tagattgcta caacaccatc
      241 gtgatcgata cccagatgga gcaactctac tttcgcaagc acaatcgata tcgctgcagc
      301 agcttcaagg aagtggcgga tcgggtctat ttcgatacag actacatgag caagtacatg
      361 tacgggctcg cgatcacctc ctttctttgg cccaaccaca ccgccatgta cgcgttcttc
      421 gtggggactt ttccaaccgg agcgcgcggc acctacctgg agatcggccc cggccacggc
      481 tactatttcc gccaggccgg catcctcggc aactttgacc gcatggtcgg cgttgacatc
      541 agcgccgcca gcatcgccct gaccaaggac atcgtcgagc gtctgggcgt gaagtcccac
      601 gccaagatcg agttgatcga atccgatttt ctcaagatgg cggacgatga gctgggctgc
      661 tcctgcatcg tcatgggtga ggtgctggag catgtcgaag atccggcaat gttcctgcgc
      721 gcgattgcgc gccgcagccg ccccgacact cacgttttca tcaccacctg cgtcaatgcc
      781 cccgccatcg atcacatcag cctgttccgg acccccggtg aggtcgaaga cctgatacag
      841 gcgaacggcc tccacatcgt ggaggccttg ggggtgccct atgcgggcaa aactctgcag
      901 gaatgtgaag cgcagcggct tgcggtcaac gtggcctata cgctgcgcaa ggcatgacgc
      961 cgttcaatct gacgtttcac catctcggac tggcagtgcg gcgccccaat gaggcactga
     1021 gctttttgca gggcttgggc taccgctgcg ccgaaccggt gtttgacggc ctgcagaatg
     1081 tgcacctcat catgtgcgcg catcaggcga tgccggcggt cgaaatcatc tatcccggcg
     1141 cgggcaccac gccgatcgat ggttatctgg cacggcagcc gaacggcttg gtctatcacg
     1201 catgctatgg ctcgccggat cttgctgaaa gcctggcgca atgggaggct gccgggatcg
     1261 ccgccgtgtg cgtctcagag ccaaagcctg cgatcttgtt tggcggacgc aaagtatcct
     1321 tttacaatgt cttgggcgtc ggcctcatcg agatcatcga gaccgaggct gggccggcca
     1381 ccgcgctgat gagcgcataa ggtagagacg gcggcttcac tgcagccgcg cccggcccga
     1441 gccgttactt gttttgcggc ggctgtgcgg gaggcgtcat agccggcgtg ctgggtcgcg
     1501 tcgttgatga cggcgcgctc ggcggcattg gaacagtgct ggttgacggc cctggagcgg
     1561 gaacgggcgt agtgcttgtt gttgctgccc ctggagtagg catcggcatc ttgcttgtag
     1621 gcggtcccgc gaccggaccc ccggacgacg atcccgacgc ctgaggcacc gggggcgctc
     1681 cctccgccac cttgaacgtt ggcaccgggc cggacgacgg tttggttgag gtgacctccg
     1741 ggactcccgc gttgtttggc ccggccgtaa cggccggtgc tggtgtcgcc gcagctaccg
     1801 tggcgggcgc tgtcgtcgga gcggcggggt gcgctgcttg ttgcggtggg gctgcggcca
     1861 cggtggtgga cgccgttccg cctttgctcg gcgtgccacc g
//
LOCUS       DATAVD010000429         2077 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3016985, whole genome shotgun sequence.
ACCESSION   DATAVD010000429 DATAVD010000000
VERSION     DATAVD010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2077
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3016985"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..243
                     /locus_tag="VHX39_07985"
     CDS             <1..243
                     /locus_tag="VHX39_07985"
                     /inference="COORDINATES: protein motif:HMM:NF018219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009486 - cytochrome bo3 ubiquinol oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="COX aromatic rich motif-containing protein"
                     /protein_id="HEX3991097.1"
                     /translation="PPDRFAEWVRSVRGQGQRLDEAGYRTLLTQSQNDAPKSYGTVQS
                     QLYEMIVTQHLPPGPGPAEGQPNRDVSPRSEAGNAR"
     gene            233..>2077
                     /locus_tag="VHX39_07990"
     CDS             233..>2077
                     /locus_tag="VHX39_07990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019087776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX3991098.1"
                     /translation="MLGKLTWAAIPFDQPIPLVAGATVVVIMLGVLVFIAVKGWVPYL
                     WREWITSVDHKRIGVMYVLLALLMLVRGFIDAVMMRSQQALAYHAPGYLPPDHYDQIF
                     SAHGTIMIFFAAMPLVIGLMNFAVPLQLGVRDVAFPTLNSVGFWLTATGALLVNISLV
                     VGEFARTGWLPFPPLSEQQYSPGVGVDYYLWALQISGLGTLLTGINFVTTILKVRAPG
                     MNYLRMPMFCWTALASNLLIVAAFPILTATLAMLLLDRYLGFHFFTNTAGGNMMMFMN
                     LIWAWGHPEVYILVLPAFGIFSEVVSTFSGKPLFGYRSMVAATMAICIISFCVWLHHF
                     FTMGAGPNVNAIFGIASMIIAVPTGVKIFNWLFTMYGGRIRFATPMLWSIAFMVTFAV
                     GGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGAVVFGGFAGISYWFPKAFGFRLHEG
                     WGKAAFWLTLAGFFAVFGPLYWVGLMGMTRRLQHYDVAAWQPFILAAGVGIVIMAAAA
                     ACQVIQIVVSIRRRDELRDLTGDPWDGRSLEWGTPSPPPAFNYAVLPQIEAGEAYWTV
                     KQRARAQKQWDDEPQYEPIEMPRNSPTGFACAFFATLMGFALIWHIWWL"
BASE COUNT          330 a          617 c          651 g          479 t
ORIGIN      
        1 ccgccggatc gctttgcgga atgggtccga tcggttcgcg gccaaggtca gcggctcgat
       61 gaggccggct atcggacgtt gctgacacaa agccaaaacg acgcacccaa aagttacggg
      121 acggtccagt cgcaacttta cgagatgatc gtgacccaac atttgccgcc aggtccagga
      181 ccggcggagg ggcaaccgaa cagggacgtg tcgccgcgtt cggaggctgg caatgctcgg
      241 taagctcacc tgggccgcca tcccgttcga tcagccgatt ccgctcgtgg ccggtgcgac
      301 ggttgtggtc attatgctcg gcgtgctggt gttcatcgcg gtcaagggct gggtgccgta
      361 tctgtggcgc gaatggatta ccagtgtcga tcacaagcgg atcggcgtca tgtacgtgct
      421 gctggctctg ctgatgctgg tccgagggtt tatcgacgcg gtgatgatgc ggtcgcagca
      481 ggcgctggcc tatcacgcgc cgggatattt gccacccgac cattacgacc agatcttctc
      541 ggcccatggc accatcatga tattctttgc cgcgatgccg ctggtgatcg ggttgatgaa
      601 ctttgcggtg ccgttgcaac tgggtgtgcg cgacgtcgct ttcccaacgc tcaattctgt
      661 cggcttctgg ctgaccgcga cgggtgcact gctggtcaac atctccctgg tggtcggcga
      721 attcgccagg accggatggc tgccgtttcc accgctgtcg gaacagcaat attcgccagg
      781 cgtcggcgtc gattattacc tctgggcatt gcaaatctcc ggcctgggca cgctgctgac
      841 cggcatcaac ttcgtcacca cgatcctgaa agttcgtgcg ccgggcatga actatctgcg
      901 catgccgatg ttctgctgga cggcgctcgc gtcgaacctg ctgatcgtcg cggcgtttcc
      961 gatcctgacc gcgacactcg cgatgctgct gctcgaccgt tatctcggct tccatttctt
     1021 cacgaatacg gccggcggca acatgatgat gttcatgaac ctcatatggg cctgggggca
     1081 tcccgaggtt tacatcctgg tgctgccggc gttcggcatt ttttctgagg tggtgtcaac
     1141 gttttccggc aaaccgctgt tcgggtatcg ctcgatggtg gcggcgacga tggcgatctg
     1201 catcatttcg ttctgcgtct ggctgcatca tttcttcacg atgggagccg ggcccaatgt
     1261 caatgccatc ttcggcatcg catcgatgat tatcgcggtg ccgaccggcg tgaagatctt
     1321 caattggctg tttaccatgt atggcgggcg catccgcttt gcgacgccaa tgctgtggtc
     1381 gatcgctttc atggtgacgt tcgcggtcgg cggcatgaca ggcgtgctgc tggcagtgcc
     1441 cccggccgat ttcgttctgc acaacagcct gtttctcgtc gcgcattttc acaacgtgat
     1501 catcggtgcc gtggtgttcg gcggctttgc cgggatctcc tactggttcc ccaaggcgtt
     1561 tggcttccgg cttcatgagg gctggggcaa ggcggcgttc tggctcaccc ttgccggttt
     1621 tttcgccgtg ttcgggccgc tctattgggt ggggttgatg ggcatgacgc ggcggctgca
     1681 acactacgac gtcgctgcct ggcagccgtt catcctcgcc gcgggagtcg gcatcgtgat
     1741 catggccgca gcggccgcct gtcaggtgat ccagatcgtc gtcagcatcc gtcgccgcga
     1801 tgaactgcgc gacctcaccg gtgacccgtg ggacggacgt tcgcttgaat gggggacgcc
     1861 ctccccgccg ccggccttca actatgcggt gctgccgcag atcgaagccg gcgaagccta
     1921 ttggaccgtc aagcagcgcg cccgcgcgca aaaacaatgg gacgacgaac cgcagtacga
     1981 gccgatcgag atgccgcgca acagcccgac tggctttgcc tgcgcgtttt tcgcgacgtt
     2041 gatggggttc gcgctgatct ggcacatctg gtggctg
//
LOCUS       DATAVD010000430         3388 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2646617, whole genome shotgun sequence.
ACCESSION   DATAVD010000430 DATAVD010000000
VERSION     DATAVD010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3388
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2646617"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1418)
                     /locus_tag="VHX39_07995"
     CDS             complement(<1..1418)
                     /locus_tag="VHX39_07995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991099.1"
                     /translation="MSGLTIRLFGGMAIRDADGTDFLPRSRKTRAIVAVLTLTAPKSS
                     LRSHLTALLWSRRGTEQGRASLRQSVHELQGILGSSWNRILVAERHSLAFVLDDVTVD
                     AIEAARAAASKTALLRLFEDGFLEELGGLDPAFDAWLVKERGRLVAHARIGGEAFLEE
                     AHPREAIILTARSLLRLDPANDGAWRALIEAHIQASDRAAARFACEQWAEAMGLATNE
                     MPPPELATFLSRIRFGSGQHKSDIRSGVMEDVQLPEGPVAEGVRPLPNGVSDRGNSRN
                     GPGVLDGGIPQQSQPDEVTLSHVSEDVVVPERPPMRDRALPFRLMPGGVTGDRVDPAA
                     APTGRVAEATILPGQPETARDRAMPNVIAPAWGVARRMMPDGDSPNAGTPIGVSENRV
                     VPGAPTRNGAISGGGHVGHARAGGHSATAEAWKPAHRPSSTAIRRPSRSSLRLGIREM
                     RVVGPDVDAALSVGVAEEVTTA"
     gene            1813..2868
                     /locus_tag="VHX39_08000"
     CDS             1813..2868
                     /locus_tag="VHX39_08000"
                     /inference="COORDINATES: protein motif:HMM:NF015558.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative sulfate exporter family transporter"
                     /protein_id="HEX3991100.1"
                     /translation="MTVPPTVIIAPRATRALPGWAKLLPGFGLCVVIAGIALLAGDAV
                     PVVGAPLFAIAIGVLVANTLRDALHLGTLKISEISKLCLKTGIVILGGSLDLSQIAHT
                     GGSSLGFLAVTVTAGLVTALLLGKWLGLDWRMRCLIGMGTTICGASAIAALAPVIRAK
                     GEEIAYAVTVVFFFNMIAVFLFPTLGHLFGLSDNGFGIWTGTAVNDTSAVVAAGFAFS
                     PAAGTIATIVKLTRTTLIIPLVIGFGLALPWLDPEAPKQSVSLARRVYDSFPVFILLF
                     LGASIARTVGLTGGHAADIQLLGRWVLVIALAAVGLLGHWRAFAGAGARPLLLGGLTW
                     FAVAAASLLMQGITQQL"
     gene            3047..3334
                     /locus_tag="VHX39_08005"
     CDS             3047..3334
                     /locus_tag="VHX39_08005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991101.1"
                     /translation="MAVYQLVDQLSRDPESRERWFIERSVPGGAPIRLLFQGTRRQAQ
                     SEVTRLNAFLKSKTGGSGPRAAENQGFRTQVDTLTLSAWSMSGFGLSGSVD"
BASE COUNT          577 a         1078 c         1079 g          654 t
ORIGIN      
        1 aacgctgtcg tgacttcctc ggcgacgcca acagacagcg ccgcatccac atcgggtccg
       61 accacccgca tctctcgtat gccaagccgg aggctcgatc gggacggccg gcgtatcgct
      121 gtgctggatg gccggtgcgc gggcttccag gcttctgccg tagcgctgtg gccgcccgcc
      181 cgcgcgtgtc cgacatgtcc gccacccgat attgctccgt tccgcgtggg tgctccgggc
      241 accacacgat tttccgagac ccctattggc gtacctgcgt ttggcgagtc accgtcgggc
      301 atcatccggc gggccacacc ccaggcgggc gcgatcacgt ttggcatagc tcggtcacgc
      361 gccgtctccg gctggcccgg caggattgtg gcttcggcca ctcggcctgt tggcgcggcg
      421 gctggatcga cgcgatctcc ggttacccca cccggcataa gcctgaacgg caaagcccgg
      481 tcccgcatgg gaggccgttc cggcacgacc acgtcttccg agacgtgcga cagtgtgact
      541 tcgtccggct gagactgctg cgggatgccg ccgtcgagaa caccaggacc gttgcgtgaa
      601 ttgccgcggt ccgatacgcc attcggaagg ggcctgacac cttctgcaac gggcccttcc
      661 ggcaactgca catcttccat gacgccggag cgtatgtcgg acttgtgttg ccccgagcca
      721 aagcggatgc gggacaaaaa cgttgccagt tccggcggag gcatctcgtt cgtcgcgaga
      781 cccattgcct cagcccattg ctcgcaggca aaccgagcgg cggcgcgatc gctggcctgg
      841 atatgcgcct cgatcagtgc ccgccaggcg ccgtcattcg ccgggtccaa tcgcagcaac
      901 gaccgcgcgg tcaggatgat ggcctcgcgc ggatgggctt cttcgaggaa tgcctcgccg
      961 ccgatccgcg cgtgcgccac cagacgccct cgctccttca ccagccaggc gtcgaacgcc
     1021 ggatcgagac cgccaagctc ctcgagaaac ccatcttcga acaaccggag caacgccgtc
     1081 ttgctggcgg ccgcgcgggc ggcttcaatc gcatcgacgg tgacgtcatc caggacgaac
     1141 gccaaagagt ggcgctcggc caccagtatc cggttccagc ttgatcccag gatgccttgc
     1201 aactcatgca ccgactggcg caaggacgcg cggccctgct cggtgccgcg cctgctccac
     1261 aacaatgcgg tgaggtggct ccgaagcgac gacttcggcg cggtcagcgt caggactgcc
     1321 acaatggcgc gggtcttgcg cgaacgagga agaaaatccg tgccgtcggc atcccggatt
     1381 gccattccgc cgaatagccg gatggtcaaa cctgacacgg acgtcggttc acgggttggc
     1441 tcatcgcgac gcatttgccc gtgaaacctc acgatccggc cgatgctccg tccgagtgcc
     1501 cgacgtccag gccgcggagc atttcgagcc ggtctcctag cccgcaatcc ttaataacca
     1561 gtggcgaaac agggtcatct gttcgttaat tcgtggacct gtggttgatt tggtacaggc
     1621 gcgagtttgt tgcgaaaccg gactttccgg ctgcgcctga cagccaggct gccgttacgg
     1681 cggcggcgcg aacgaccgag gcgggagaga ctccggcttg tgcaacggcg ccatccgggc
     1741 caaaatttct ccgcggaccc agcctcgtgc caggtttccg ctaaccgggc tcatgcccaa
     1801 gggaggaccc ggatgaccgt cccgccgacc gtgattatcg caccaagggc gacacgcgcc
     1861 ctgccggggt gggccaaact tttacccggc ttcgggcttt gcgtggtcat tgccggcatt
     1921 gcgctgttgg ctggcgatgc cgtgccggtc gttggcgcgc cgctattcgc gatcgccatc
     1981 ggggtgctgg tggccaatac gctgcgcgac gcgctgcatc tgggaacgct gaagatcagc
     2041 gaaatcagca aactctgcct gaagaccggc atcgtcattc tgggcggcag cctggatctc
     2101 agccagatcg cgcataccgg cggcagttcc ctgggctttc ttgcagtcac tgtgaccgca
     2161 ggcctggtga cggcgctgct gcttggcaaa tggcttgggc tcgactggcg aatgcgctgc
     2221 ctgatcggaa tgggcacgac gatttgcggc gcctccgcga ttgccgctct ggcaccggtg
     2281 atccgcgcca aaggcgagga aatcgcctac gcggtcacgg tcgtattctt cttcaacatg
     2341 atcgccgtgt ttctgtttcc aaccctgggc catctgttcg gattgtcgga caacgggttc
     2401 ggcatttgga ccggcacggc agtgaacgat acctcggccg tggtggcggc cggctttgca
     2461 ttcagcccag cggcgggaac gattgcaaca atcgtgaaac tgacgcggac gacattgatc
     2521 attccgttgg tgatcgggtt tggcctggcg ctgccctggt tggacccgga ggcaccgaag
     2581 cagagcgtgt cgctggctcg ccgggtctat gattcatttc ctgtattcat cctgctattc
     2641 ctgggggcat cgatcgcccg gaccgtcggg ttgaccggag gccatgccgc cgacattcag
     2701 cttctgggcc gctgggtttt ggtgatcgca ctggctgcgg tcggattgct ggggcattgg
     2761 cgagcgtttg cgggggctgg cgcgcggccg ctgttgttgg gtggcctgac gtggttcgcc
     2821 gtcgcggcgg cgagtttgct gatgcagggg attacgcagc agctttagcc atgccagccc
     2881 gcaaactccg cgaggcaagc ggcctgccgc catacaaggc agagcaagca cctgcgcgat
     2941 aaaatcagcc ggaccaattg cattacggtg gcgcagcgta actgtttcga aagaagtttt
     3001 gcgtatcagt tgccggcaac tcccattttg cggggtacat cggccaatgg cggtttatca
     3061 acttgtcgac caactgtccc gcgatcccga atcccgggag aggtggttca tcgagcgatc
     3121 tgtccctggt ggggccccca tacgcctgct gttccagggc acccgacgcc aggcgcaatc
     3181 cgaagtgacg cggctgaatg cattcctcaa atcgaaaacc ggtgggtcag ggccgcgcgc
     3241 cgctgaaaac cagggtttcc gcactcaggt ggacacgctg acgctcagtg cctggagcat
     3301 gtcggggttc ggactgagcg gctccgtcga ctgatatcgg ggatgcattg acccgagtgt
     3361 cgcaaattat ccgggcaacc tggcgtaa
//
LOCUS       DATAVD010000431         2847 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1156523, whole genome shotgun sequence.
ACCESSION   DATAVD010000431 DATAVD010000000
VERSION     DATAVD010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2847
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1156523"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..893)
                     /locus_tag="VHX39_08010"
     CDS             complement(<1..893)
                     /locus_tag="VHX39_08010"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEX3991102.1"
                     /translation="MRVFPAGSARAAYLASSALALVFATGAHAQSAGSANNGSQQETV
                     VVTGTQIVGSTITGALPVTVIDQSTLAAVAPISSDDLVRSIPQMGAINFNSQYLPGSS
                     ATARGDIGSIDLRNIGEGATLLLVNGRRVAQDPRNQASAGLLAPTVTYNSNAVPITDA
                     QRTEVLLDGAAALYGSDAIAGVVNVITNQNMNGVKFNAQHGEADGTHYNTSTLDAMGG
                     TDFAGGKGNITASFNYTQEAALLASDQYWTASSDKTPLFAGTPYAGIASLNGDTTTGT
                     PWGTFTTTPAATVRSGATTLTT"
     gene            complement(1055..>2847)
                     /locus_tag="VHX39_08015"
     CDS             complement(1055..>2847)
                     /locus_tag="VHX39_08015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991103.1"
                     /translation="PLVPNNQLPHNDLPLPVPPTMWHFSQSIAYTMSMDRAILDFAAR
                     NREALLYNIYKMGANSIQRGSQDSWTITDDRILALKTAAKEEQDSKSGNAGAPRQDVM
                     TGRVPVDVSLYAKILHDPAKRDARGYIVPADQADFPTAIVFLNALIKSGIEVERANAP
                     FTVNGQSYPSGSFVVMAAQAYRPEVRDMFEPQDHPQDFEYPGGPPIRPYDVAGWTLAM
                     QMGIHYDRVTDGFSGPFAPVKGLIKPPAGHILGSGQAGWLVDHATINSYVLTNRLLKA
                     SLPVSWLKGATQSAGHQFAPGAIWVPRQGAAADIMSKAVNGLGIDAYAVDATPSVAAM
                     PLKPVRIGLVDVYGGSMTSGWTRWLFEQLEFPFTKVYPQRLDSGDIKRDFDVIVMTDG
                     IYNSAVRRPPTRVRQPQPDEIPEQFRSWLGTVTDDKTVPQLDTFVKQGGTLIAVGSSS
                     HIAEAMKLPVQDALLEQGPDGKTKPISGTKFYIPGSLLAASVDPNQPLAYGMPAKADV
                     FFEDSPTFKVPQGAANVTPIAWYSDADPLRSGWAWGQKVLQGTDAVLDITDGGGKVFV
                     LGPEVTQRGQSYGTFKLFFNGLYYGPAVAH"
BASE COUNT          562 a          850 c          878 g          557 t
ORIGIN      
        1 gtcgtcagag tcgtggcgcc cgacctgacc gtggctgccg gcgtggtggt aaaggtgccc
       61 cagggcgtgc cggtggtggt gtcgccattg agcgaggcta tgccggcata aggggtaccg
      121 gcaaacaacg gcgtcttgtc cgaggatgcg gtccaatatt ggtccgaggc aagaagcgcc
      181 gcttcctggg tatagttgaa cgaggctgtg atattgcctt tgccgcccgc aaaatccgta
      241 ccgcccatgg catcgagcgt cgacgtatta tagtgcgtgc cgtcggcctc gccatgctgg
      301 gcattaaact tcacgccatt catgttctgg ttggtgatca cattgaccac gccggcaatg
      361 gcatcagagc catagagcgc ggcggcgccg tccagcagga cttccgtgcg ttgcgcatcg
      421 gtgatcggga cggcattcga attgtacgtg acagtggggg ccagcaatcc agcggaggct
      481 tggttcctgg gatcctgcgc gacccggcgg ccgttcacca acagaagcgt ggcgccctcg
      541 cctatgtttc tcagatcgat cgaaccgata tcgccgcggg ccgtggcgct gctgcccggc
      601 aaatattgag agttaaaatt gatggcgccc atctggggga tggagcggac gagatcgtcg
      661 ctggagatcg gagcgaccgc ggcgagagtg ctttggtcga tgacggtaac cggcaatgcc
      721 ccggtaatgg tggaaccgac gatctgggta ccggtgacca ccacggtttc ctgctgcgag
      781 ccattgttgg cggaccccgc cgactgcgcg tgagcgccgg tcgcaaaaac aagcgcaagg
      841 gcgctgctcg ccaaatatgc cgcacgcgca ctgccagccg gaaacactct cattttcgaa
      901 aacccctatg tcacacgtca tcatgagacg gaggcggagc ggcaacccgt aacggattta
      961 tgaaaaaagt ggggtggtga tgcctggaag cgacaaactc ttagaccctg acggcacgat
     1021 ccgtcaggcg cgttccaacg aaccacccct ccattcagtg cgcgaccgcc ggtccgtagt
     1081 aaagaccgtt gaagaacagc ttgaaagttc catagctttg gccgcgctgc gtgacctctg
     1141 gacccagcac aaacaccttt ccgccgccgt cagtgatatc caacaccgcg tcagtcccct
     1201 gcaggacttt ttgcccccaa gcccaacccg agcgcagcgg gtcggcgtcg gaataccaag
     1261 cgatgggcgt cacatttgcc gcaccctgcg gcactttgaa cgtcgggctg tcctcgaaaa
     1321 acacatcggc cttggctggc atgccatacg ccagcggttg attgggatcg acagatgctg
     1381 ccaagagcga accaggaata tagaatttcg tgcccgaaat cggcttggtc tttccgtccg
     1441 gaccctgctc gagaagcgcg tcctgcaccg gcaacttcat cgcctcggcg atgtggctgg
     1501 acgacccaac tgcaatcagg gtgcccccct gcttcacgaa cgtatctagc tgtgggactg
     1561 tcttgtcgtc cgtgacggtg cccagccaag accggaattg ctccgggatt tcgtcaggct
     1621 gcggttgcct tacgcgggtc ggcgggcgcc taaccgcgga attatagatg ccgtcagtca
     1681 tgacgatcac atcgaagtcc cgcttgatat ctccgctgtc gagacgttgc ggatagactt
     1741 tggtgaaggg aaattcgagt tgctcgaaca gccagcgggt ccagcccgac gtcatcgagc
     1801 cgccatagac atccaccagc ccgatccgga caggtttgag cggcatcgcc gccacggacg
     1861 gcgtggcatc gacggcatag gcatcgatcc ccaagccgtt gaccgccttc gacatgatat
     1921 cggcggcggc cccttggcgc ggtacccaga tcgcgcccgg cgcaaactgg tgcccggcgc
     1981 tttgcgtcgc gcccttcagc catgaaaccg gaaggctcgc cttcagcaga cggttggtga
     2041 ggacatagga attaatggtg gcgtgatcga ccagccaccc ggcctgaccg gagcccaaaa
     2101 tgtgaccggc cggcggcttg atcaagccct tgacgggcgc gaatggcccc gaaaatccgt
     2161 ccgtgacccg gtcatagtga atgcccatct gcatcgccaa tgtccatccc gccacgtcgt
     2221 agggcctgat cggcggaccg ccgggatatt cgaagtcctg cggatgatcc tgcggctcga
     2281 acatatccct gacttcgggc cgataggctt gcgcagccat caccacaaag gacccggagg
     2341 gatagctctg accgttgacc gtgaatggcg cgttggcccg ttcgacttcg atgccggact
     2401 tgatcaaggc attgagaaag acgatcgcgg tgggaaagtc cgcctgatcg gcggggacga
     2461 tgtagccccg cgcatcgcgc ttggcgggat cgtgaagaat ttttgcgtat aatgagacat
     2521 caacgggaac gcgcccagtc atcacgtcct gtcgcggcgc gccggcgttt ccactcttgc
     2581 tgtcctgttc ctccttggct gctgtcttga gcgccaggat ccgatcgtcg gttatagtcc
     2641 aggaatcctg cgagcctctt tggatcgagt tcgcgcccat tttgtagata ttatagagga
     2701 gcgcctcgcg gttgcgcgcc gcgaagtcca ggatcgcccg gtccatcgac atggtgtagg
     2761 cgatcgactg agagaagtgc cacatggtcg gcgggaccgg cagcggcagg tcgttgtgcg
     2821 gcagttggtt gttgggcacc aacggaa
//
LOCUS       DATAVD010000432         1534 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3017163, whole genome shotgun sequence.
ACCESSION   DATAVD010000432 DATAVD010000000
VERSION     DATAVD010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3017163"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(561..743)
                     /locus_tag="VHX39_08020"
     CDS             complement(561..743)
                     /locus_tag="VHX39_08020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991104.1"
                     /translation="MIRLRSMLTLAALGLVAVLGGCVAYPAYPGYPAYGYSGYGYAAP
                     AYYAGGYYGYRGGWRR"
     gene            complement(1256..>1534)
                     /locus_tag="VHX39_08025"
     CDS             complement(1256..>1534)
                     /locus_tag="VHX39_08025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-loop NTPase"
                     /protein_id="HEX3991105.1"
                     /translation="SFYCCPACGHRADIFGHGGAKAEAARLGTEFLGEIPLLLDIRVA
                     SDGGTPIAASAPESDAAKAYAALAARVWEKVSGTAVARGGGGPRIVID"
BASE COUNT          332 a          509 c          441 g          252 t
ORIGIN      
        1 ataacgtaaa tatagtgtcc cgtgtgtttc acccgccgat tcaaccggcg tttagtcatc
       61 gcgcggctcg ttgccatgcc gggcttctgc cggccgcggc agagccggtt gcggatgaaa
      121 catcatcgta aaacagagca agcgcgacca gtgtcgccat caccggtagc acgaaaattg
      181 tccgcgccaa tccaggcaac cgccagttgg atacaaagga aacctttgtc ccgacccgga
      241 ggggttcacg acagcggcca ccgaggatgc caacgcttgc atgatcggcc ggtcatcgac
      301 cgctatccta acggactacg cctttcggtg gtgcactaac aggcggcaga gtaaaaggcc
      361 caggaaacgc catgactgtc gcaacgataa tcatctccgg cagcgctaaa gcgcagcagg
      421 ggcgaattta gttgctgtgc cgaagcaaga aatagcgccg cactggggat aggccactat
      481 tcggcaggcc ggcgaagtgg aagcgctcgg gtcggtcctc acggtcgggc acaccgcctc
      541 aacgctcggc cggccgctgc tcagcggcgc cacccgcccc ggtaaccata atacccgccc
      601 gcgtaataag ccggtgcggc atacccgtaa ccagaatagc cgtatgccgg ataaccagga
      661 tacgccggat aagccacgca gccacccagc accgcaacca gccccagcgc agccagggta
      721 agcatcgaac gcaggcgaat catcgcttcg ctcctccgat tgaacttact cgacatgatg
      781 tctcatcaag gcgctttcac ggcgaagaag cgttcaaccc atgtcgcttg gtaacgggct
      841 agacaccgca gccgggcgcc agcgccgctg ccaaatgccc ctcgggggac tcccgtgtcc
      901 cgcccgtagc gtgtcattcg gcagagtggc acccagcacg tgcaaaatat gtgtcggcaa
      961 ggatgtcccg cttcagctca cagcgatcac cagaagcacc ttgcgcgccg gtctggaaaa
     1021 tgaaacgacg gacgtccagg gcaccgttcc tgtcgaatat tgataaaaat ctatccagat
     1081 ccggcccccg ttgcctaacg ggaccatgtt tatggtcgga gttattgtga ttcgattaca
     1141 gaactgtacg gttatgtggc gaagcgtcag cccgcgatac ggaatgcgac gtccgcgctt
     1201 gtccggccgg attggccgcg gcgttcaaaa gcccgatgac agcgagggcc cgagatcagt
     1261 caatgacgat ccggggaccg ccgccgccgc gcgccaccgc cgtgccggac accttctccc
     1321 agaccctggc ggccagggcg gcataggcct tcgccgcatc gctctccggc gccgatgccg
     1381 cgatcggcgt acccccgtcc gaggccacgc ggatatccag cagcagcggg atctcgccca
     1441 ggaattccgt ccccagccgc gccgcctcgg ccttcgcccc gccatgcccg aagatgtccg
     1501 cccggtggcc acacgcgggg cagcaataaa aact
//
LOCUS       DATAVD010000433         7455 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1902070, whole genome shotgun sequence.
ACCESSION   DATAVD010000433 DATAVD010000000
VERSION     DATAVD010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7455
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1902070"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..731
                     /locus_tag="VHX39_08030"
     CDS             <1..731
                     /locus_tag="VHX39_08030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019085596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3991106.1"
                     /translation="ENVHFGYKPNREILHGISFAIPAGKRLAIVGPTGSGKSTISRLL
                     FRFYDVTGGRVLIDGKDIRDVTQASVRAAIGVVPQDTVLFNDTIRYNIGYGNPNASPR
                     EIEQAARLAQVHDFVMRMPEGYDTMVGERGLKLSGGEKQRVAIARTILKDPRILILDE
                     ATSALDTRTEQDIQGAFRAAMSHRTTLVIAHRLSTVVDVDEIIVLRDGAIEERGSHAA
                     LLARDGLYARMWAMQADEPTPALV"
     gene            769..1014
                     /locus_tag="VHX39_08035"
     CDS             769..1014
                     /locus_tag="VHX39_08035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991107.1"
                     /translation="MASESGQEPPAELSLAGSVVDKAIEYMMGQNVPPVAIASALLGG
                     CMALLAQTLGDEAIVGILNNAVTSVRSGELRGNQPGS"
     gene            1038..1994
                     /locus_tag="VHX39_08040"
     CDS             1038..1994
                     /locus_tag="VHX39_08040"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HEX3991108.1"
                     /translation="MPTKMTALSFSQYGAPSVLSLIERDIPTLNRGEVLVEVKAAAIN
                     PSDIRIVEGLFHSPLPRVPGRDYAGTVVAGDAPAGQEVWGSGPRFGIDRDGAHAKYVV
                     VAADWISAKPAGLSMEQAASVGVPFITAWSALVTSGNIQAGETILIIGAAGAVGRAAT
                     QIAVWKGAKVIPAIRAKGEVPSGTINTLTDDIPRAVRDLNGGEGADLVLDCVGGALFE
                     PALTSLREGGRHLVIVSKGMRRVSFDLTDFYHNKSHLIGVDSLGLTGTEIASIMDRLR
                     PGFEACMLRPFEVTSWPLARAIDAYEAAERDGARAKHVLLPS"
     gene            2052..2630
                     /locus_tag="VHX39_08045"
     CDS             2052..2630
                     /locus_tag="VHX39_08045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HEX3991109.1"
                     /translation="MNKERLTAFSDGVIAIIITIMVLELKVPLSATFTALSGLLPVFL
                     SYVLSFVFVAIYWNNHHHLLHACRRVNGTVLWANMHLLFWLSLIPFTAGWMGENNFAE
                     LPVALYGVSMLMPALAYYLLQNQIVRANGSDHRLAEALGRDIKGKISFVICVAGIVLA
                     FVNHWAGFAAYVLLALLWLIPDRRIERAIAEL"
     gene            complement(2708..3982)
                     /locus_tag="VHX39_08050"
     CDS             complement(2708..3982)
                     /locus_tag="VHX39_08050"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3991110.1"
                     /translation="MALSATANQIPWWREPSKDQWYAFIAAWLGWTLDAFDFTVFLLI
                     MHPIAEYFNVPFISVTLVFTITLWMRLLGATASGWLCDRIGRKTPLMIAILGYSLCNL
                     AAGVAPTFTFLFVARAVLGFFMGAEWPAGSALAMETWPQRSRGLIGGILQGSWGIGFM
                     MSFALYGLFYNTIGWRGMLIAGVLPALATVYVRFFVKEPEVWLENRRLQKAQQREVHV
                     PLLSIFKRGMLPNTLNACWWMASAFICYYSVTVLFATHLQVDLKMSPGAIGEVGVAAN
                     LVTFLASIGWGWVADKYGRRAAMIIPAIIAIPLAPVYLLSTDFTLIWWGFVLQGAAAA
                     GGMQGQLATFMNERFPTEVRATASGFCYHQGAIWGGLVAPIIAYFANTWHLGYAIPMM
                     VGTMLFATSYIAALLVGPETKGKELVAELSIA"
     gene            complement(4612..5886)
                     /locus_tag="VHX39_08055"
     CDS             complement(4612..5886)
                     /locus_tag="VHX39_08055"
                     /inference="COORDINATES: protein motif:HMM:NF024241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3991111.1"
                     /translation="MMSDTTSRAIPWWKEPTRDQWYAFIAAWLGWTLDAFDFTVFLLI
                     MHPIAQTFGVSMTAVTFVFTITLWMRLIGATASGWLGDRIGRKTPLMIAILGYSICNF
                     AAGFSPTFMFLFCARAVLGLFMGAEWPAGASLAMETWPIRSRGLMSGLLQGSWGLGFL
                     LSFAIYGLFYNSIGWRGMLWVGIVPALAVVYVRYFVKEPEVWVENRRIQRAENREVKA
                     PLISIFKRGMIWNTLNCCWFMASGFVLYYSINVLFVTHLQVDLKLAPAQIGEIGVAAN
                     LVVFLASMSWGWVSDRYGRKVAQILPALIAIPLAPIYLLSGNFTLIWWAFVAQGAFGS
                     GGFASQAPSYLAERFPTEVRATASGFCYHQGAVWGGLTAPILAYLATDLQYGYVIPML
                     VGTIVAAASFAIAIALGPETRGKELVSDVVVA"
     gene            6764..>7455
                     /locus_tag="VHX39_08060"
     CDS             6764..>7455
                     /locus_tag="VHX39_08060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEX3991112.1"
                     /translation="MNDAPVTGAPPGAPRDYRDTVFLPQTSFPMRGDLPKKEPAILAR
                     WEAMDLWGKLRAASKGRKVFILHDGPPYANGHLHIGTALNKILKDVINRTRQMAGYDA
                     NYIPGWDCHGLPIEWRIEEDYRAKKKDKDAVPILDFRAECRAYATHWMEIQAREFRRL
                     GVEGAWRDRYATMDLPSEGAIAHEILKFLLNGALYRGLRPVMWSPVEKTALAEAEIEY
                     HDHTSVTIWVRFP"
BASE COUNT         1493 a         2243 c         2326 g         1393 t
ORIGIN      
        1 tcgaaaatgt ccatttcggc tacaagccga atcgggagat cctgcacggc atcagcttcg
       61 ccattccggc tggcaaacgt ctggcgatcg ttggtccgac cggcagcggc aagtcgacca
      121 tcagccggct gctgttccgc ttctacgacg tcaccggcgg tcgcgttctg atcgacggca
      181 aggacattcg cgacgtgacc caggccagcg tccgtgccgc catcggcgtg gtgccgcagg
      241 acaccgtgct gttcaacgac accattcgct acaacatcgg ctacggcaat cccaacgcct
      301 cgccgcggga gatcgagcag gccgcccggc tggctcaggt gcatgatttc gtcatgcgta
      361 tgccggaagg ctacgacacc atggtcggcg aacgcgggct gaaactgtcc ggtggcgaga
      421 agcagcgggt ggcgattgcc cgcaccatcc tcaaggaccc gcgcattctg atcctcgatg
      481 aggcaaccag tgctctggat acccgcaccg agcaagacat ccagggcgcc ttccgggccg
      541 ccatgagcca tcgcaccacg ctggtgattg cgcatcgcct gtccaccgtg gtcgatgtcg
      601 atgaaatcat cgtgctgcgc gacggcgcga tcgaggaacg cggttcccat gcggcgttac
      661 tcgcgcgcga tggactttat gcccggatgt gggccatgca ggccgatgaa cccactccgg
      721 ccctggtgta accgaggttg gggtatgacc ggaacaggag agcgacaaat ggcatcggag
      781 tctggtcagg aaccccccgc cgaactgagc cttgccggtt cggtggtgga caaggcgatc
      841 gagtacatga tgggacagaa tgtccccccg gtggcgatcg cttcggcatt acttggcggc
      901 tgcatggcgt tgctggccca gacgctgggc gatgaagcga tcgttgggat tttgaacaat
      961 gcggtgacca gcgtgcgctc gggagagttg cgcggcaacc agcccggatc gtgaacccgc
     1021 cgcgggatgg aaccgccatg ccaacgaaaa tgaccgcttt gagtttttcg cagtacggcg
     1081 ccccctcggt gctgtcgctg atcgaacgcg acattccgac gttgaaccga ggcgaagtac
     1141 tcgttgaagt caaagccgct gccatcaatc ccagcgatat tcgcatcgtc gaagggctgt
     1201 ttcattcgcc gttgccgcgt gttcccggcc gggattacgc cggcaccgtc gtcgccggcg
     1261 atgcgcctgc ggggcaggag gtctggggca gcgggcctcg gttcggcatc gaccgagacg
     1321 gagcgcacgc caagtacgtc gtggttgcgg cggattggat atcggcaaaa cccgccggtt
     1381 tgtcgatgga acaggcggcc tcggtcggtg tgccgttcat tacggcgtgg tcggccctgg
     1441 tgacatcggg aaacattcag gcgggcgaaa cgatcctgat catcggtgcc gccggtgcgg
     1501 tgggtcgcgc tgcgacgcag atcgcggtgt ggaaaggcgc caaggtgatt ccggcgatcc
     1561 gggccaaggg cgaggtgccc tcgggcacga tcaatacgct gaccgacgat attccgcggg
     1621 ccgtccgaga cctgaacggg ggtgagggcg ccgatctggt gctcgactgc gtgggcgggg
     1681 cgttattcga accggcgttg acctcattgc gcgagggtgg ccggcatttg gtcatcgtca
     1741 gcaaagggat gcggcgggtc agtttcgacc tgacggattt ttaccacaac aaatcccatc
     1801 tcatcggcgt tgattcactc gggctgacgg gcaccgagat cgcttcgatc atggaccggt
     1861 tacgcccagg atttgaggct tgtatgctga ggccgttcga ggtgacgagt tggccgctgg
     1921 cccgtgcaat tgacgcctat gaggcggcgg aacgggatgg cgccagagca aagcacgtgt
     1981 tgctgccgtc gtaaggccgg ggcctactcg ccaccgtcgg tgtggaggcc atgcccggac
     2041 gaggagcacc aatgaacaaa gaacgattga ctgccttcag tgatggcgtg atcgccatca
     2101 tcattacgat catggtgctg gaactgaaag tcccgctcag cgcaacgttc acggcgctgt
     2161 cgggcctgtt gcccgtgttc ctgagctacg ttctgagctt cgttttcgtg gcgatctact
     2221 ggaacaacca ccaccatctg ctgcacgcgt gcaggcgggt gaacggcacc gtcctttggg
     2281 ccaacatgca tttgctgttc tggctttcgc tgatcccgtt cactgcgggc tggatgggcg
     2341 aaaacaattt cgccgagctg cccgtcgccc tctatggcgt ttcgatgctg atgccggcgt
     2401 tggcgtatta cctgttgcag aaccagatcg tgcgggccaa cggctccgac caccgccttg
     2461 ccgaggccct gggccgcgac atcaaaggca agatctcgtt tgttatttgc gtggccggaa
     2521 tcgttctggc attcgtcaat cattgggcgg ggttcgcagc ctatgtgctg ctggcgttac
     2581 tttggctcat tccggaccgc cggatcgaac gcgcgattgc ggaactttaa tggggacatc
     2641 cgctacgacg ccgtgggagc cggccggcca gaccggctcc gcaacgacag gtgcaccccg
     2701 tttgtgctca ggcgatcgat agttccgcca cgagttcttt gcctttggtc tcaggcccga
     2761 ccagcagtgc cgcgatatag ctcgtcgcaa acagcatggt cccaaccatc atcgggatcg
     2821 cgtagccaag gtgccaggta ttggcgaagt aagcgatgat cggcgccacg aggccgcccc
     2881 agatcgcgcc ctggtgatag cagaaaccgc ttgcagtggc gcgcacctcg gttgggaacc
     2941 gttcgttcat gaaggtcgcc aactgaccct gcatcccgcc ggcggccgct gctccctgca
     3001 gcacgaaccc ccaccagatc agggtgaaat cggtgctcag cagatagacc ggcgcgagtg
     3061 gaatggcgat gatggcgggg atgatcatcg cggcacgccg cccgtactta tcggcaaccc
     3121 agccccatcc gatactggcc aggaacgtga cgagattggc ggcgacgcct acctcaccga
     3181 tcgcgccggg cgacatcttg agatcgacct gaagatgcgt cgcgaacagc accgtgaccg
     3241 aatagtaaca gatgaaagcg ctggccatcc accagcacgc gttcagagtg ttggggagca
     3301 tgccgcgttt gaaaatactg agcagcggca cgtggacctc acgttgttgc gctttctgga
     3361 gccgccggtt ttccaaccag acctcgggct ccttgacgaa gaagcgcacg tagacggtcg
     3421 ccagggccgg cagcaccccg gcgatcagca tgccgcgcca gccgatcgtg ttgtagaaca
     3481 gaccatagag ggcaaacgac atcatgaagc cgatgcccca tgatccttgc aggatgccgc
     3541 cgatcagtcc gcgcgaccgc tgtggccagg tttccattgc caaagccgat ccggccggcc
     3601 attccgcgcc catgaaaaag cccagtacgg cgcgcgcgac aaacagaaac gtgaaggttg
     3661 gcgcgacgcc ggcggcaagg ttgcacagcg aatagccgag gatcgcgatc atcaacggcg
     3721 tcttgcgtcc gatccggtcg cacagccagc cggaggcggt ggctcccaac agccgcatcc
     3781 acagggtgat ggtgaacacc aacgtcaccg aaatgaacgg cacgttgaag tattccgcga
     3841 tcggatgcat gatcagcagg aagacggtga aatcgaacgc gtcgagcgtc cagcccagcc
     3901 atgcggcgat gaaggcgtac cattgatcct tggatggttc tctccaccac gggatctgat
     3961 ttgcagtcgc ggatagtgcc attggtgttg cttcccgtat tatgtcgttt ttgacgaacg
     4021 tttctgtgta gtggtacggc gcgcccatac attatggtga agtaatgata tcggcacggc
     4081 tttcccgtgc acccgatgcc atgggattgc ggcagggtac tgaggacggc tcccacctgg
     4141 cgtggtcagg cgcccggtcg gtcggattgc gctcgatgct ctgcttcagc cgcccaaaag
     4201 ggcgcgtcgg gacattcggt cgttgtcctg gccgatgcca tggtgggtca ggtgcagagg
     4261 gtcgaaagca aattagccaa gcttacgacg gatagcacct atgcgttcgc cgcggaagat
     4321 aaaatatcgt gagtgatgac ttttttggcg caaaagtcac acgactgccc ccaacgccag
     4381 caccgggcag tcgagttgcc agttggcccc tggcgttctc acaatcggat cgtttcgtcg
     4441 ctctcctgtt caagtgccgg gatcgccaaa tcgtttcgta agtcgtcaac catgggcgaa
     4501 agtcacatgg ctggccgcgt cggggcttag gtcttgacaa aacgcggcga ctgttggcgc
     4561 gccaccggcg tggccggccg gcggcgcatc tccgggcgcc gctcgcccgg gtcaggcaac
     4621 caccacgtcc gacacgagtt ccttgcctcg ggtttccggg ccaagcgcga ttgcgatagc
     4681 gaagctcgcc gctgccacta ttgttccgac cagcatcgga atgacatagc catactgtag
     4741 gtcggtcgcg agataagcca ggatcggcgc cgtcaggccg ccccacacag cgccctgatg
     4801 gtagcagaag cccgacgccg tcgcgcgcac ctcggtcggg aaccgctcgg cgagatagct
     4861 cggcgcctga ctggcgaagc cgccgctgcc gaacgcgccc tgggcgacga aggcccacca
     4921 gatcagggtg aagttgccgc tgagcagata gattggtgcg agcgggatcg cgatcagggc
     4981 gggaaggatc tgcgccacct tgcggccgta gcgatcggac acccaccccc agctcatgct
     5041 ggcgaggaag acgaccaggt tggccgcgac gccgatctcg ccgatctggg ccggcgccag
     5101 cttcaggtcc acctgcagat gtgtgacgaa caatacgttg atggagtagt agagcacgaa
     5161 gccgctcgcc atgaaccagc aacaattcag cgtgttccag atcataccgc gtttgaaaat
     5221 gctgatgagt ggcgccttga cctcgcggtt ctcagcgcgc tggatgcgcc ggttttcgac
     5281 ccagacctcg ggttccttga cgaagtagcg gacatagacg accgccaggg cgggcacgat
     5341 gccgacccac agcatgccac gccagccgat cgaattgtag aacagcccgt agatcgcgaa
     5401 cgacaacagg aagccgaggc cccacgagcc ctgcagcagc cccgacatta atccgcgcga
     5461 acgaattggc caggtttcca tcgccaaaga ggctccggcg ggccattcgg cgcccatgaa
     5521 caagcccagt accgcgcgcg cgcagaacag gaacatgaag gtgggcgaga agccggcggc
     5581 gaagttgcat atcgagtagc cgaggatcgc gatcatcagc ggcgtcttgc ggccgatccg
     5641 atcaccgagc caacccgagg ccgtggctcc gatcaggcgc atccacagcg tgattgtgaa
     5701 aacaaacgtc acggccgtca tcgacacgcc gaaggtttgt gcgatcggat gcatgatcag
     5761 caagaatacc gtgaagtcga acgcgtccag cgtccagccc agccatgccg cgatgaaagc
     5821 gtaccactga tccctggtgg gttccttcca ccatgggata gcccgcgaag ttgtatcaga
     5881 catcattgtt actttcttta tttcgtggtt gccgagatgc attgatgata caggccggtg
     5941 cgccaacacg ttttggaata gtaacatttc tgccgcagac agtgcttcac atgcccgggg
     6001 tttgcggcat cgtgttaacg aacgttctct cccggcagca gcaggcaccg ggtcggtcga
     6061 aacctggtcc gacattccgc ttccggacgg catccgtgca gggaaactcg tccggaccaa
     6121 atactcgcag cggcaaccgg ctgtttcgtg cgcttccggt gtcggacgcc ggtggcgagg
     6181 ttcgaaagac ggatcagcta agcgtgagac aaatagcacc catgcgtctg tcgcgtaaga
     6241 tcaaatatca tgaataaacg gttagtcgca gctgtggccg tcgggattcg tccgtcagaa
     6301 ttttcctgtc gggatttatc cgtcgggaaa tgcctgttgt gaactgtcat ataaatgccg
     6361 acactatgcg ttaatttatc aagattcaca ctgatttcgt atgatacgaa atcgtatgcg
     6421 ccgaacaagg ccggcattgt tgttcggtgc atggccggca aagccggtgc cagccggatt
     6481 acgatcggtg ggaacttcgg ccgcgatcgc atgcggtttg gacgactgga tgcggccgca
     6541 gccaattggc cgatcgccgg tgaaacggct gatctcggcc gtcgccgccc gacaatatac
     6601 gtacttgacg gcggcgcgga cgaagccaca tggtccgaac catggcaaac gtgtacagac
     6661 aggcgcgaat taccggcccg gacgctcttt gagcgccggg agccttgacg cgacctgaac
     6721 gcggcccaat acgccgcact cgtaagcctg tgatggatca gccatgaacg acgctccggt
     6781 aacgggtgcc cctccagggg cccctcgcga ctaccgcgac acggtctttt tgccgcaaac
     6841 ctctttcccc atgcgcggcg atttgccgaa gaaagagccc gcgatactcg cccgctggga
     6901 ggcgatggat ctgtggggca aactgcgcgc cgcctccaag ggacggaagg tattcatcct
     6961 gcacgacggc ccgccgtacg cgaacggcca tctgcatatc ggcacggcac tgaacaaaat
     7021 tctcaaggat gtcatcaacc ggacccgcca gatggccggc tatgacgcca attacatccc
     7081 ggggtgggac tgccacgggc tgccgatcga gtggcgcatc gaggaagact atcgcgccaa
     7141 gaagaaagac aaggacgctg tcccgatcct cgatttccgc gccgagtgcc gcgcctatgc
     7201 cacccactgg atggagatcc aggcccgcga gttccgtcgg cttggcgtcg aaggcgcctg
     7261 gcgcgaccgc tacgccacca tggatttgcc ctcggaaggg gcgatcgcgc acgaaatcct
     7321 gaaattcctg ctgaacggcg cgctgtatcg cgggctgcgt ccggtgatgt ggtcgccggt
     7381 cgaaaagaca gcgctggccg aggccgagat cgagtatcac gaccacacct ccgtgacgat
     7441 ctgggtccgc ttccc
//
LOCUS       DATAVD010000434         2252 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2647061, whole genome shotgun sequence.
ACCESSION   DATAVD010000434 DATAVD010000000
VERSION     DATAVD010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2647061"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            523..1977
                     /locus_tag="VHX39_08065"
     CDS             523..1977
                     /locus_tag="VHX39_08065"
                     /inference="COORDINATES: protein motif:HMM:NF013124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX3991113.1"
                     /translation="MSERDQNLVYETGYWQIHLGRRELSARGVSVDIGGRAFEILEVL
                     AQSANKLVTKDELMDRVWPGATIGENTLQVHISAIRKAFGQDRAMLETASGRGYRLLG
                     SWTLRHRDTASAASAGREPETAPANNFPLVITRLIGRAAAARQLQDLVSAYRVVTLTG
                     PGGIGKSTLALDVARGILTDFDGGGWFVELASLSDPGLVPGAVARTLGAEFSGETISA
                     EAVARAIGSAKLLLLLDDCEHVIDAVADLIETIVRLCPDAKVITTSREVLRVSGEYVF
                     RVPPLEVPALESIEPDHILGHSAVELFVSKIAALDSAFLPRAEDILSIAAICRHLDGI
                     PLAIEFAAARAATLGVLPVTVGLSDRFTMLTNGRRTALPRHQTLRATLDWSYQLLPAP
                     ERLLLCRLAIFPAGFTLDAAVAAMQDAGIDAPSVIEGIANLVAKSLVAVDQSDAAARW
                     FLLETIRAYALEKLTADSNTDPHHPPDFGYRRTT"
     gene            complement(1980..>2252)
                     /locus_tag="VHX39_08070"
     CDS             complement(1980..>2252)
                     /locus_tag="VHX39_08070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991114.1"
                     /translation="RLGESLDTFNPAVRSFLDQASAPFLQQTGDPVAAQQLALQTLAN
                     LRERQASSLAYFDVFWVLAVVMVALVFAVLLMKRSVAEKGARIGSE"
BASE COUNT          455 a          668 c          667 g          462 t
ORIGIN      
        1 agctgggacc cggcaaaccg aattggcggc gcagactgtt tcacctgaca ctccttccat
       61 acggtcctgc ggcgcttgat tgcgaacaat atcgcgcccg accaaaagac gtccattata
      121 cttaggtatc agtgctctgg ccagttcgcc tgcttcgagc ccgaatgcgc cgaccgatag
      181 acggacagtc gggtgcgctt gaagtcagaa ttcatctggc cgcaatgaaa tcccaccgac
      241 cgatacgatg gtatcgacga taccttcgtc caatggcccc atcgccacgc ccctgctttg
      301 atccgcttcg tgatcagata tcggaccggc ctacaggata cagggggcaa tgtcatgtcc
      361 acgacaccat ggttgccgat caggaaatcg ccgtcgattg actttcgtaa cgatgtttgg
      421 gtgaccggcg tgccaccacc gatgccaacg cgaaggatga acaggcggtg ggaccgcagc
      481 tcgctgatca gaagcggcaa tctctttacg aggggcactc gagtgtcgga acgtgaccag
      541 aacctggtct atgagactgg ttattggcaa atccatctcg ggcgacgcga attgtcggca
      601 cgcggtgtct cggtcgacat cggtggccgt gcgttcgaga tcctggaggt cctcgctcag
      661 tcagccaata aactggtgac caaggatgag ttgatggacc gcgtgtggcc gggcgccacg
      721 atcggagaaa acacgctcca ggttcatata tcagcaatcc gcaaagcgtt tggtcaggat
      781 cgagccatgc tggagaccgc ctcgggtcga ggttatcgcc ttctcggaag ctggactttg
      841 cgacatcggg atacggcgag cgccgcctcg gcaggtcgcg aacccgaaac cgctccggca
      901 aacaatttcc ccttggtcat cacacgcctg attggccggg ccgctgctgc gcgacaatta
      961 caggacctcg tctctgccta tcgcgtggtg acgttgaccg gacccggtgg cattggaaag
     1021 tccaccctcg cccttgacgt cgctcgcggc atcctcaccg actttgacgg cggcggatgg
     1081 tttgtcgaac tggcgtcgct gtcggacccc ggtctggtac ccggcgcagt ggccaggaca
     1141 ctcggtgcgg agttcagcgg cgaaaccatt tcggcggagg ccgttgcacg cgcgatcggc
     1201 tcagcgaaac tgctgttgct gcttgacgat tgtgaacacg tcatcgacgc cgtggccgac
     1261 ctgattgaaa cgatcgtgcg gctgtgtcca gacgcgaagg tcataacgac aagccgcgag
     1321 gttttgcggg tcagtggcga gtatgtcttt cgcgtgcctc cgctcgaggt gccggccttg
     1381 gaatcaattg aaccggatca catcctcggc cacagtgcgg tcgagctctt cgttagcaaa
     1441 atagcggcgc ttgattcagc attcttgccg cgtgccgaag atattctgtc gattgccgca
     1501 atctgtcggc accttgatgg gataccgctc gccatcgaat ttgccgctgc gcgtgcggcc
     1561 acgctcgggg ttcttccggt gaccgtcggc ctgagcgatc gtttcacgat gttgacaaac
     1621 ggacgccgga ccgcgttgcc aaggcatcag acactgcgtg cgacactcga ttggagctac
     1681 cagttgctgc cagcccctga acggctgttg ctgtgtcgcc tcgccatctt tcccgccggc
     1741 tttaccctcg atgcagctgt ggctgccatg caggatgccg gcatcgacgc accttcggtc
     1801 atcgaaggaa tcgcgaacct ggtggcaaag tctctggtgg cagtggatca atcggatgca
     1861 gccgcgcgct ggttcttgct ggaaacaatt cgagcctacg cgcttgaaaa actgaccgcg
     1921 gactcgaaca ccgacccgca ccacccgccg gatttcggtt atcgacgaac gacttagtgt
     1981 tattccgatc cgatccgggc gcctttctcg gcaacagaac gtttcatcag cagcactgcg
     2041 aacaccagcg cgaccataac aacggcgagt acccagaaca catcgaagta ggcaagcgac
     2101 gatgcctgtc gctcacgtag gtttgcgagt gtttgcaagg ctaattgctg cgcggcaacc
     2161 ggatcgccgg tttgttgcag gaacggcgcg gaagcctgat cgaggaacga acggacggcc
     2221 ggattgaagg tatcgagcga ctccccaagg cg
//
LOCUS       DATAVD010000435         2694 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2831580, whole genome shotgun sequence.
ACCESSION   DATAVD010000435 DATAVD010000000
VERSION     DATAVD010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2694
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2831580"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..415)
                     /locus_tag="VHX39_08075"
     CDS             complement(<1..415)
                     /locus_tag="VHX39_08075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991115.1"
                     /translation="MADQQDHLTAATDIDADDAQAPAAPPCAMVIFGAAGDLTKRLVV
                     PALYNLANSKRLSEGFQIVGVDLAAKSAEDWSQGLTDMMNEFVTKGGGEFEADHIDQT
                     AWKWLTSRMTYVQGDLNDPAMYLRLGEHLTGLRGCE"
     gene            complement(440..2494)
                     /gene="tkt"
                     /locus_tag="VHX39_08080"
     CDS             complement(440..2494)
                     /gene="tkt"
                     /locus_tag="VHX39_08080"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010514131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX3991116.1"
                     /translation="MNNDDLDLLAINTIRTLSIDAIQKANSGHPGAPMALAPLVYTIW
                     NRVMNFDPKDPIWPNRDRFVLSNGHASMLTWSILHLTGVQAVNADYERVGHASVTLDD
                     IKHFRQLGGVPGHPEYHLRSGVEVTTGPLGQGIANSVGMAIARKWLADRYNKPGFELF
                     DYDMYVVCGDGCLMEGVGSEAASLAAHLGLDDLCWIYDNNHITLDAPTNVTFTEDVAA
                     RFLGYGWNVLRVGDANDITRIEQALTVFRETKGRPTLIILDSHIGYGSPHRVDTPAAH
                     GEPLGEEEVKLAKRAYGWPEDAQFLVPDGVYEHFNQGIGARGADARAGWEALFARYRE
                     KFPALALEIEQMQHRDLPAEWDRNLPTYKADPKGIAGRDASGQVLNVLAQNIPWFLGG
                     SADLASSNRTALKFEGAGDFQAASPGGRNLHFGVREHAMAAILNGLALSKIRAFGGTF
                     FIFSDYARPSIRLAALMELPTIYVFTHDAMGDGEDGPTHQPVEQLISMRAMPGLCLLR
                     PADANEVVEAYRYALRLRHQPAALVLSRQPLPTLDRSRYAAASGLAQGAYVMADAAGG
                     QPEIILIASGSEVSLAVTAHETLTGLGIRSRVVSMPSWDIFEHQPQSYRDSVLPPGVT
                     ARLAIEQGSVLGWDRYVGPSGRVIGMQTFGASAPLKELLRNFGFEPERVVATAKEMLG
                     RS"
     gene            complement(2496..>2694)
                     /locus_tag="VHX39_08085"
     CDS             complement(2496..>2694)
                     /locus_tag="VHX39_08085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008850548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="6-phosphogluconate dehydrogenase
                     (decarboxylating)"
                     /protein_id="HEX3991117.1"
                     /translation="GRVSDSGEGRWTIKAAIDEGVPAHVLSSALYERFSSRGEADFGD
                     KLLSAMRYEFGGHLEKPASGA"
BASE COUNT          542 a          859 c          780 g          513 t
ORIGIN      
        1 cttcgcaccc gcgcaatcct gtgagatgtt cgcccaaccg caggtacatt gccggatcgt
       61 tcaggtcgcc ctgcacatag gtcatgcggc tggtcagcca cttccacgcg gtctgatcga
      121 tgtgatcggc ttcgaattcg ccaccgccct tggtgacgaa ctcgttcatc atgtcggtca
      181 gaccctggct ccagtcctcg gcacttttgg cagccagatc gacaccgacg atctgaaacc
      241 cctcggacag gcgctttgag ttggccaggt tgtacaaggc cggcacgacg aggcgtttgg
      301 tcagatcacc ggcagcacca aaaatcacca tggcacaagg tggcgcggcc ggtgcctgcg
      361 cgtcatctgc atcgatgtcg gttgccgccg tgagatgatc ctgttggtcc gccattgcct
      421 tgctccaatc ctgttctttt cagctgcgtc caagcatctc tttggcagtc gcgacaaccc
      481 gttccggctc gaaaccgaaa ttgcgcagca actccttcag cggcgcagat gcgccaaagg
      541 tctgcatgcc aataacccgg ccggacggac cgacatagcg gtcccagcca agcacggaac
      601 cttgctcgat cgcgaggcgc gccgttacgc cagggggcag cacactgtcc cgataggatt
      661 gcggctgatg ttcaaaaatg tcccatgatg gcatggaaac gacccgagac cggatgccca
      721 ggccggtgag cgtttcgtgc gccgttaccg ccagactcac ttcgctgcct gatgcgatca
      781 gaatgatctc aggctgtccg cccgctgcgt cggccatcac gtacgccccc tgcgccaacc
      841 cggaggccgc ggcgtagcgg cttcgatcga gcgtcggcaa tggctggcgc gacagcacga
      901 gggcggcggg ctgatgacgc aaccgcaagg cgtaacgata cgcctcgaca acctcattgg
      961 catccgccgg ccgcagcaga caaaggccgg gcatggcacg catcgaaatc aactgctcaa
     1021 ccggctgatg cgttggtcca tcctcgccat cgcccatggc gtcgtgcgtg aagacataga
     1081 ttgtcggcag ctccatcaac gcggcaagcc ggatggacgg ccgcgcgtaa tcgctgaaga
     1141 tgaaaaaagt cccgccaaag gctcggatct tcgacagcgc caaaccgttc aggatagccg
     1201 ccatggcgtg ctcgcgaaca ccgaagtgca gattgcggcc accgggtgaa gccgcctgga
     1261 aatcgccggc gccctcgaat ttcaacgctg tcctgttgga cgaagcgagg tcggccgaac
     1321 caccgagaaa ccacggtatg ttctgcgcca gaacgttcaa cacctggccc gatgcatcgc
     1381 gtccggcaat gcctttggga tcggctttat aagtcggcaa attccggtcc cactccgccg
     1441 gtaaatcgcg gtgctgcatt tgctcgattt ccagcgcgag cgcggggaat ttttcccgat
     1501 agcgggcgaa cagtgcttcc caaccggcac gcgcatcggc gccccgcgcg ccaattcctt
     1561 gattgaaatg ttcgtatacg ccatcgggca cgaggaattg cgcgtcctcg ggccacccgt
     1621 aggcccgttt ggcgagtttc acctcctcct caccgagcgg ttcgccatgt gccgccgggg
     1681 tatcaacacg gtgcggcgag ccataaccga tatggctgtc gagaatgatc agcgtcggcc
     1741 gtcctttggt ttcgcggaac accgtcagtg cttgctcgat acgcgtgata tcgttggcgt
     1801 cgccgacccg cagcacattc cagccgtagc cgaggaaccg tgctgcaacg tcttcggtga
     1861 acgtaacgtt cgttggcgca tcaagggtga tgtgattgtt gtcgtagatc cagcacaaat
     1921 cgtcgagacc gagatgcgca gccaacgaag cggcctccga tccgacgccc tccatcagac
     1981 agccatcgcc gcatacgacg tacatgtcgt agtcgaacag ttcgaaacca ggcttgttgt
     2041 agcggtcggc aagccacttg cgcgcgatcg ccatgcccac gctgttggcg atgccttgac
     2101 ccagtggacc cgtggtcact tcgacacccg accggagatg atattccgga tgacccggca
     2161 cgccgccaag ctggcggaag tgcttgatgt catcgagcgt gaccgaggcg tgaccaaccc
     2221 gctcatagtc cgcgttgaca gcctgcacgc cggtcagatg caggatcgac caggtcagca
     2281 tcgacgcatg accgttggag agaacgaagc ggtcacgatt gggccagatc ggatccttcg
     2341 gatcgaaatt catgacccgg ttccagatcg tatagaccag tggcgccaac gccataggcg
     2401 caccgggatg gcccgagttc gccttttgaa tcgcgtcgat cgacagcgta cggatcgtat
     2461 tgatcgccaa caggtcgaga tcgtcgttgt tcatatcacg ctcccgatgc cggtttctcg
     2521 agatggccgc caaattcata acgcatggcg gacagtagct tgtcgccgaa gtccgcctcg
     2581 ccgcgcgagc tgaaccgctc gtacagcgcc gaggacagca catgggccgg cacgccttca
     2641 tcgatcgccg ccttaatggt ccaacggccc tcgcctgaat ccgataccct gccg
//
LOCUS       DATAVD010000436         2470 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1529258, whole genome shotgun sequence.
ACCESSION   DATAVD010000436 DATAVD010000000
VERSION     DATAVD010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2470
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1529258"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /locus_tag="VHX39_08090"
     CDS             <1..356
                     /locus_tag="VHX39_08090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="bile acid:sodium symporter"
                     /protein_id="HEX3991118.1"
                     /translation="GIWHQLDAATLGTLLLVDAALLAAVLSLTTLASRALGFSRGDEI
                     VAVFCGSKKSLASGLPMATVLFAGQSAGLIVLPLMLFHQIQLMACAALARRYAARSEA
                     TDRVAASAGLAFQAH"
     gene            557..763
                     /locus_tag="VHX39_08095"
     CDS             557..763
                     /locus_tag="VHX39_08095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin"
                     /protein_id="HEX3991119.1"
                     /translation="MPETTYKIVEIVGTSEVSISKAIEGAIAKASGSLRHLGWFEVGQ
                     IRGNIADGKVNRYQVTLKVGFTLE"
     gene            1268..>2470
                     /locus_tag="VHX39_08100"
     CDS             1268..>2470
                     /locus_tag="VHX39_08100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991120.1"
                     /translation="MSGTETAGANHSTRAVEDQQSLSDLLTFNSDVNEVFLLIDHISG
                     RSEKSLKDLDTTDIELPVAQGVAGPLPAQADAKDPTSGKPSLADVLHRLCQIGYPPHS
                     DAMTKAHKAAFVLMLKDRLNVLAIPARGVTIAYTAMFVSATDGCQLHIWSKQRAPDGR
                     HATRGDLAREAYPGLASHARCFAKMYRWYPWLMAFVLVLTASAYWDVGFGRTIVQRIE
                     QLEQSRSLVLHPDSKGAPGITAFDEISCKSPNRPPPDQAQTCDRLSYLADRISDSRRD
                     LSDFAVATTSGHGSNWFLRCIAWIRPLSYGFMFDGLAPSPERPEATVASVLSLFSTYV
                     LPAMFGLLGTLSAIMRSVQAKVRDSLLGPRDFPLTALGLVIGPVAGLAVGLFFTPTEA
                     TTSGATGLA"
BASE COUNT          463 a          755 c          745 g          507 t
ORIGIN      
        1 agggcatctg gcatcaattg gacgcagcaa cgctcgggac cctgctgttg gtcgacgccg
       61 ctttgctggc cgcagtgttg agcctgacca cgctcgcgag ccgcgcgctt ggtttctcgc
      121 gcggcgatga aatcgtggcg gtgttttgcg gctccaagaa gagcctcgcc agcggtcttc
      181 ccatggccac cgtgctgttc gccggccagt ccgctgggct gatcgtgctg ccgctgatgc
      241 tgttccatca aatccagctg atggcgtgtg ccgcgctggc gcgccggtac gcagcgcgtt
      301 cggaggccac ggaccgtgtc gccgcgtccg caggtctggc gttccaggcg cattgatctg
      361 ccgacggatc cggccccgcc gggaagttcg gacaatccgg caccgaattc cttgaccgcg
      421 gttttcgccg ccccaagtta cctaatgccg gggtactcac gtccccccag cggcgccgcc
      481 gcgtgccgac cagcctggtg aacccgaaac gggtctcgcg gccaatgatg attcaaaacc
      541 acgcagggag atcgaaatgc ctgagacaac ttacaaaatc gttgaaatcg tcggcacctc
      601 ggaagtcagc atctcgaagg cgatcgaggg cgccattgcc aaagcgtctg gatcgctccg
      661 ccatctgggc tggttcgagg tcggacaaat ccgcggcaat atcgccgacg gtaaagtcaa
      721 tcgttaccag gtcacgctga aggtcggctt taccctcgaa tagctgcccg gggcaccatg
      781 gccacgctga taaccgccca gtacaatctg ggcggatagg tgctgcgtga ccaactgggc
      841 gcaccggatg cgatacgccg gttgagggtt ttttaacagg tattagcctg cgtcacgcca
      901 aacagtggct atggcgatgc aggtggcctt ccgagccgga ccgcggcccg caatttggaa
      961 accgcaattc tacgcgtgcg tgtcgcaaac tttcagtttc ccaccgccgg caatgccggc
     1021 gaactgacgg atgtcaaacg acgattgccg acttcaatac ggtatcgaaa ctggtgctgt
     1081 ccacaggact ccgatgtctc ggagggcagc gccgcgattg ccgggcgctg acggcaggtc
     1141 atcggctggg accggcgtga tacggcgaaa cgttggtgaa acgtttttgt tgacagatta
     1201 attacataat gtttcggtgg cggcgcggcc cgggtttctc accaatcaaa atgagggaga
     1261 gatctcgatg tcaggcacgg aaacggccgg cgcgaaccat tcaacgcgag ccgtagagga
     1321 ccaacagtcg ctgtcggacc tgttgacgtt caacagcgat gtgaacgagg tgtttctgct
     1381 gatcgaccat atttccggtc gttccgagaa atcactgaaa gacctcgata ccacggatat
     1441 cgaactgccg gtcgcgcaag gcgtcgccgg cccgctgccg gcgcaagcgg atgcgaaaga
     1501 cccgacttcc ggcaaaccgt cgcttgccga cgtgctgcat cggctttgcc agatcggcta
     1561 cccaccgcat tccgatgcca tgacgaaagc gcataaggcg gccttcgtgc tgatgctgaa
     1621 agaccggttg aacgtgctgg ccatcccggc acgcggcgtc actatcgcct ataccgctat
     1681 gttcgtgtcg gcgaccgacg ggtgccaact ccatatttgg tcgaagcaac gagccccgga
     1741 tgggcgtcat gccacccgcg gcgacctggc gcgagaggcc tatccaggtc ttgcatcaca
     1801 cgcgcgatgt ttcgccaaaa tgtaccgctg gtatccctgg ctgatggcgt ttgtattggt
     1861 gctgacggca tcggcttact gggatgtcgg atttggtcga acgatcgtgc aacggatcga
     1921 gcaacttgaa caatcacgct cgcttgtatt gcaccccgac agcaaagggg caccgggcat
     1981 cactgccttc gacgaaatat cctgcaagtc tcccaatcgc ccgccaccgg accaggcgca
     2041 gacgtgcgac cggttgtcct acctggccga tcgcatctcg gactcccgca gggacctgtc
     2101 tgatttcgct gtcgctacca cctctggaca tgggtcgaac tggttcctgc gctgcatcgc
     2161 atggattcgc cctttaagtt acggcttcat gttcgatggt ctcgcgccat cgcccgaacg
     2221 gccggaggca acggtcgcct cggtactgtc actgttcagc acttacgtat tgcctgcgat
     2281 gttcggcctt ctgggtacct tgtctgcgat catgcgctcg gttcaggcca aggtgcgcga
     2341 cagcctgttg gggccacggg atttcccgtt gacggcgctt ggcctggtga ttggtccggt
     2401 cgccggtctg gcagtgggac tgttttttac gccgaccgaa gccaccacgt ctggtgccac
     2461 cggcctcgcg
//
LOCUS       DATAVD010000437         7972 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2647155, whole genome shotgun sequence.
ACCESSION   DATAVD010000437 DATAVD010000000
VERSION     DATAVD010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7972
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2647155"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..524
                     /locus_tag="VHX39_08105"
     CDS             <1..524
                     /locus_tag="VHX39_08105"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TIGR02281 family clan AA aspartic protease"
                     /protein_id="HEX3991121.1"
                     /translation="TPAEHVAQSAPVMPPRAERVVVAPPPPIPGVQRPTGVSSNVEVN
                     GAISGPNEAISQRGNDGSFAFDAVVNGSHVRMLFDTGATVVGLRAEDAERLGIPIGDL
                     NYSAKIKTANGTAEVAPITIDSMIIGNITLRKVSGFVAREGALPQNLLGQTFLTRLSG
                     FNVENNLLILHGH"
     gene            complement(665..1660)
                     /locus_tag="VHX39_08110"
     CDS             complement(665..1660)
                     /locus_tag="VHX39_08110"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3991122.1"
                     /translation="MVPLSVLDLSPIAEGSDAGQALRNSLDLARHVEALGFRRFWMAE
                     HHNLPGIASAATAVALAHIAAGTDHIRIGAGGIMLPNHAPLVIAEQFGTLAALHPGRV
                     ELGLGRAPGSDQITAQAMRRNLQGDVDDFPRDVVELMAYFQPVQPGQHVQAVPGANSQ
                     IPIWILGSSTYGAQLAAILGLPFAFASHFAPGMMQQAVAIYRERFRPSAQLVAPNVML
                     GVNIVAADTDDEAKFLFSSLQQSFLNIRSGRPGRLPPPMADFERQIDRYGAAMLADAL
                     SCAIVGGPDTVRQGIADFVKRTGADELMVTANIFDHAKRKRSFEIVAEQNGQNAE"
     gene            complement(1663..2526)
                     /locus_tag="VHX39_08115"
     CDS             complement(1663..2526)
                     /locus_tag="VHX39_08115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HEX3991123.1"
                     /translation="MQAQSAAMKALLEQPGLQVMPGCGDAMGARLIEEAGFRTAFISG
                     SSISAMRLAMPDMDLLTFPEMRDVVETVIAAAPKVLWLADGDTGYGNALAVQRTVHAY
                     ARAGAAAVLIEDKQWPRPLGHNGAKLVIERDAAILRCRAAAEACREAGILLLARTDAR
                     TSRGFDEALARIKAFVAEGADILFLDSPQSEAEMRAGIEACAGRPSLSVTSPAGRHFM
                     PNDAELERLGIKIAVYPQEILAATVYAIKAVLAGMQGGTKPPLAGPPELASAIRSQHY
                     LASDARWPDPR"
     gene            2638..4722
                     /locus_tag="VHX39_08120"
     CDS             2638..4722
                     /locus_tag="VHX39_08120"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3991124.1"
                     /translation="MALLTGLTVVQAGSGLAVAVCGRMLSDLGATVRCVEPDLSTPLA
                     VHLNSGKAKATVTDADLILCQDFPDIASIRERNARAAVVTISPFGQTGPAANDPATDL
                     TLLYASGIARLLTGQVDDLAEAPIRPVGEQSAFIGGLAAACAGMHAVLAPEPGASVDV
                     SMQEALATLAMTELARAGMTGRSARRKRLTDGNGATVCILPASDGYVAISPREEKQWA
                     AWLEAMGSPSWGSESRFAGKADRVANWDALHALMSKWSRGHAKQWIADTAQAAHVPSF
                     PLRELSEHLTSAQLQHRGFWHGETVQMPGAPFGLTLYPGAGHPGAGPVGWRGPGPLPL
                     SGVRVLDFSWVIAGPTATRYLAAMGAEVIKVEAPGRGDPGRATELHSVLGQAKKAIVL
                     DLKRPEHREAARRLVQTSDVLVENFATGVMDRLGLGAEALRAINPDMIYVSASGMGRT
                     GPEAHAVAYGTLLQCYAGFAGLNRHPGIAPRVGFAWLDPMLGMMLAFATAASLWRRRT
                     TGSVARVDCSMIEAILWTLSGPLLATQTGAPAEPMGNRSDCYAPHGAWRCMGDDDWIS
                     IAVRNDAEWRSLCRLVPALAQMSDLDFAARCAHDADIDNALTVWAGGQDASEAATTLR
                     RCGIPAAALADSCDLVADPHLRARGFWDRQAEGVLPALPWHASFGRATGPAPALGADT
                     DAVLDTIKGRTQ"
     gene            4719..5873
                     /locus_tag="VHX39_08125"
     CDS             4719..5873
                     /locus_tag="VHX39_08125"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX3991125.1"
                     /translation="MTQRTDRIAQLLSNGNVPGVAVAAVFPDGEIVAAAAGVRDVSTG
                     AAILPDSVVWIASMTKAITSTAAMQLVEQGRLSLDAPIAGVLPQLANLQVLEGFDAGG
                     KPRLRPAHVAVTLRHLLTHSSGFVYDMWNADMSRYLEVSGTPGIISCTNAALDLPLVF
                     DPGTAWDYGIGIDWAGKAVEAISGQSLGVYLADHLFGPLGMRDTGFRIRDDQRARLAR
                     VHARTPEGTVPIDFEIPQAPEFEMGGGGLYSTVGDYLRFTRMILGGGALDGVRVLAAP
                     TVAQMSQNAMGDLRCRPMKSVAPDSTNDVDFLAGMQWGLSFLINPDALPTGRSAGSLA
                     WAGLANSYFWIDPTKQVAGVYAAQILPFFDADAVALFGAFESAVYEMANG"
     gene            complement(6027..>7972)
                     /locus_tag="VHX39_08130"
     CDS             complement(6027..>7972)
                     /locus_tag="VHX39_08130"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEX3991126.1"
                     /translation="VGRAIPIVADEYADPEKGTGAVKITPAHDFNDFEVGRRHALPMP
                     SVLDKTAHVTLTEIEPVFVEGVADPAFVAGLDGLDRFAARRAIVAELERLGLVERIEP
                     HTHQVPHGDRGGVPIEPLLTTQWYCNAEVLAKPAIEAVESGRTVFVPKQWENTFFAWM
                     RDIQPWCISRQLWWGHRIPAWYGPDGHVFVAYDDAEAAALASAHYGHAAPLVQDEDVL
                     DTWFSSGLWPFSTLGWPEQTAELARYYPGDVLVTGFDIIFFWVARMMMMGLHFMGDVP
                     FRTVYIHGLVRDERGQKMSKSKGNAIDPLELIDRYGADALRFAICALTGPGRDVKLGE
                     SRVKDYRGFVTKLWNAARFCEMNEIRVAPGFDPGAVRSPLCRWILDAANAAIEEATAA
                     LEDYRLDEYAQGGYRFVWNTYCDWFLEFAKPVFADGADVVVAAETRATAAYVLGVILR
                     LLHPAMPFVTEELWDRFGYDGVWSLIREPWPAVVAVPEAAEARAELDWVVRLIGLVRS
                     VRTEMNVPPSALAPVLLRDAAPETLARAERWIEAIRRMARASEVRALDGAMPAGSAQA
                     VLDEATVVLPLEGLIDVAAERKRLAGVRDKATGEGAKIALKLANADFVSRAKPEVVEE
                     NRERLAAFQAEAARLEAALARIR"
BASE COUNT         1463 a         2540 c         2494 g         1475 t
ORIGIN      
        1 ctacgccagc cgagcacgtc gcccagtctg cgccggtgat gcctccgcga gccgagcgtg
       61 tcgtcgtggc cccgccgccg cccattcccg gcgtgcaacg gcccaccggc gtatcctcca
      121 acgtcgaagt gaacggcgca atcagtggcc ccaacgaagc gatctcccaa cgcggcaacg
      181 acggaagttt cgcgttcgat gcagtcgtga acggcagcca tgtgcgaatg ttattcgata
      241 ccggcgccac cgtcgtcggc ctgcgcgccg aggacgccga gcgattgggc attccgatcg
      301 gcgatctgaa ctactccgcg aaaatcaaga ccgccaacgg cacggcggag gtcgcgccga
      361 tcaccatcga ttcgatgatc attggcaaca tcacacttcg aaaagtttcc gggtttgtgg
      421 cgcgggaggg cgcgttgcca cagaacctgc tgggtcaaac ttttctgacg cggctgtcgg
      481 gattcaatgt ggagaataat ttgctgatcc tgcacgggca ctgatatcca acatcagtgg
      541 accgtgagtc gctcctttcg tcatcaccgt gcttgtcacg gtgaccatca tcggcacctg
      601 tccccggaac aagtccgggg aggacgatca ggagtgttac gatgcagcaa ttccaggtgc
      661 cagttcattc cgcattttgg ccgttttgtt ctgccacgat ctcgaacgat cgtttgcgtt
      721 tggcgtgatc gaagatattt gcggtcacca tcagttcatc ggctccggta cgtttgacga
      781 aatcggcgat cccctggcgc acagtgtcag ggccgccgac gatggcgcag gataacgcat
      841 cggccagcat cgccgcaccg taacgatcga tctgccgttc aaagtctgcc atcggcggcg
      901 gcagacggcc cggccggcca cttctgatgt tcaggaacga ctgctgcaac gaagaaaaca
      961 ggaatttcgc ttcgtcatcg gtgtccgctg cgacgatgtt gacacccagc atgacgttcg
     1021 gcgcgaccag ttgcgcggac ggacggaaac gctcgcggta gatggcgacc gcctgctgca
     1081 tcatccctgg tgcaaaatgc gaggcaaacg caaacggcaa gccaagaatc gcggccaatt
     1141 gagcgccata tgtgctggag cccagtatcc agatggggat ttgggagttg gcaccgggaa
     1201 ccgcttgcac gtgctggccg ggctgcaccg gttggaagta ggccatcagt tcgacgacat
     1261 cccgcggaaa gtcgtcgaca tcgccttgca gattgcgccg catcgcctgt gccgtgatct
     1321 gatccgagcc cggcgcgcgc cccagaccga gttcgacacg acccggatgc agtgcggcga
     1381 gcgtgccgaa ctgctcggcg atcaccagag gtgcgtggtt gggcaacatg atcccgccgg
     1441 caccgatgcg gatatggtcc gttccggcag cgatatgggc gagtgccacg gccgttgccg
     1501 cactggcaat tcccggcaga ttgtgatgct cggccatcca gaagcggcga aaaccaagtg
     1561 cctcgacgtg gcgtgcgagg tcgagcgaat tgcgcaacgc ctggccggcg tcgctgccct
     1621 cggcaatggg cgagagatcg agaacggaga gcggcacgat catcagcgtg ggtccggcca
     1681 gcgggcgtca gacgccagat aatgctgcga tcggatggcg gacgccaact ccggcgggcc
     1741 tgccagcggt ggttttgtac ccccttgcat gccagccagc acggccttga tcgcatacac
     1801 cgtggcggcg aggatttcct ggggatagac cgcgattttg atgcctaagc gttccagttc
     1861 ggcatcgttc ggcatgaaat gccggccggc gggtgacgtc actgacaagg atggtctgcc
     1921 ggcgcacgcc tcgatgcccg ctcgcatctc ggcttccgac tgcggcgagt cgaggaacag
     1981 gatgtcggcg ccctcggcga caaacgcctt gatccgcgcg agtgcttcat cgaagccgcg
     2041 cgaggtccgt gcgtcggtgc gggcaagcaa caaaattccg gcctctcggc aggcttcggc
     2101 ggcggcgcgg cagcgcagaa tcgcagcgtc acgctcgatc accagcttgg caccgttgtg
     2161 gccaagcgga cggggccatt gtttgtcctc gatcagcacc gcggcggcgc ccgctcgggc
     2221 ataggcatgc accgtgcgct gcaccgcaag cgcattgccg taaccggtgt cgccgtccgc
     2281 cagccacagc accttcggcg ccgccgcgat gactgtttcg acaacgtcac gcatctccgg
     2341 aaacgtcagc aggtccatgt ccggcatcgc cagacgcatc gcggagatgc tggagcccga
     2401 gatgaacgcc gtgcgaaagc cggcttcctc gatcaggcgc gcgcccatgg cgtcgccgca
     2461 accgggcatc acctgcagtc caggttgctc gagaagtgct ttcatcgccg ccgactgggc
     2521 ttgcatgctg ggtcctttcg ggtctgctgc accgatgatg gggccagcgg tgaagaatgc
     2581 aaaatcttgc cacgcaggct ggttatcggc catcgtcgca tgatcggagg aaacgggatg
     2641 gcattgctga cgggtcttac tgtggttcag gccggttcgg ggctcgcagt tgccgtgtgc
     2701 gggcgaatgc tttccgatct gggcgccacg gtgcgctgcg tcgagcccga tctatcgacg
     2761 ccgttggccg tgcacctgaa cagcggcaag gcgaaagcga ccgttaccga tgcggatctg
     2821 attttgtgtc aggactttcc cgatattgca tcgatccgtg agcgcaacgc acgtgcggct
     2881 gtggtgacga tctcgccgtt tgggcagacc ggaccggcgg cgaatgatcc cgcgaccgat
     2941 ctgacattgc tttatgccag cgggattgcg cggctgctga ccggtcaggt ggacgatctg
     3001 gcggaggctc cgatccgtcc ggttggcgaa caatccgctt tcattggcgg tctggcagcg
     3061 gcctgtgccg ggatgcacgc agtactggcg ccggagcctg gcgcctcggt cgacgtttcg
     3121 atgcaggaag cactggccac cctggcgatg accgaactgg cgcgtgccgg catgaccggc
     3181 cgtagcgccc gccgcaaacg gctgactgat ggcaacggcg ccacggtgtg cattttgccg
     3241 gcgagcgatg ggtatgtcgc gatctcgccg cgggaggaaa agcaatgggc ggcgtggctg
     3301 gaggcgatgg gttcgccttc ctggggcagc gagtctcgtt tcgccggcaa agcggatcgg
     3361 gtggcgaact gggatgcgtt gcacgcgcta atgtcgaaat ggagtcgtgg ccatgccaaa
     3421 caatggattg ccgacaccgc gcaggcggcg cacgtgccga gctttccatt gcgcgaattg
     3481 tcggaacatc tgacgtcggc gcaattgcag catcgcggtt tctggcatgg tgagactgtg
     3541 cagatgcctg gcgcgccatt tgggttgacg ctgtatccgg gcgcggggca tccgggcgcg
     3601 ggtccggtgg gttggcgcgg gcctggtccg ctgccactgt ccggtgtgcg ggtgctggat
     3661 ttcagttggg tgatcgccgg tccgacggcc actcgttatt tggccgcaat gggcgccgaa
     3721 gtcatcaaag ttgaggcccc cggccgcggc gatcctgggc gtgccaccga attacacagc
     3781 gtgctcggcc aggcgaaaaa ggccatcgta ctggatctga aacgaccgga gcaccgcgaa
     3841 gccgcccgcc ggctggtgca aaccagcgat gtcctggtgg agaattttgc caccggcgtg
     3901 atggatcgtc tcgggctcgg ggccgaggcg ctgcgtgcaa tcaacccgga catgatttac
     3961 gtttccgcgt caggcatggg ccgcaccgga cccgaggcgc acgcggtcgc ctatggtacg
     4021 ttactgcagt gctatgccgg gttcgccggc ctgaaccggc atcctggcat cgcaccgcgg
     4081 gttgggtttg cgtggctcga tccgatgctg gggatgatgc tggctttcgc cactgcggcg
     4141 agcctgtggc gaaggcgcac caccggcagc gtggcgcggg tggattgttc catgatcgag
     4201 gcaattctgt ggacgctgtc cggtccgttg ctggcaacgc aaaccggggc tccggccgaa
     4261 ccgatgggca accggtctga ttgttatgct ccgcatggtg cgtggcgatg catgggcgac
     4321 gacgactgga tcagtatcgc cgtgcgcaat gatgccgaat ggcgctcgtt atgccgcctg
     4381 gtcccggcgc ttgcgcagat gtctgacctt gatttcgcgg cccggtgcgc gcacgacgcg
     4441 gacatcgaca acgcattgac ggtctgggct ggcggacagg atgcatcgga agcggcaacg
     4501 acgctgcgtc gctgtggaat tccggcagcc gcgttggccg actcgtgcga tctcgtcgcg
     4561 gacccgcatc ttcgagcgcg tggcttctgg gatcggcaag cggagggagt actgcccgcc
     4621 ctgccctggc acgccagctt cgggcgcgcc accggtcccg caccggcact cggggcagat
     4681 accgatgccg tacttgacac cataaaaggg aggacacaat gacccagcga accgatcgga
     4741 ttgcgcaatt gctgtcgaac ggcaacgtcc ccggcgtggc agtcgcagcg gtgtttcccg
     4801 acggcgagat cgtcgccgcg gcagctggtg tgcgcgatgt ctccacgggt gctgcgattt
     4861 tgccggacag cgtggtgtgg atcgcctcga tgaccaaagc cattacctcg acggcggcga
     4921 tgcaactggt tgagcaagga cggctgtcgc tcgatgcgcc gatcgccgga gtgctcccgc
     4981 aactggcaaa ccttcaggtg ctggaagggt tcgatgcggg cggcaaaccg cggttgcggc
     5041 cagcccatgt ggcggtcacc ctgcgccacc tgctgaccca cagttccggc ttcgtctatg
     5101 acatgtggaa tgccgacatg tctcgctatc tggaagtaag cggcacgccg ggcatcatct
     5161 cctgcaccaa tgcggcgttg gatttgccgc tggtgttcga tcccggcacc gcgtgggatt
     5221 acggcatcgg catcgattgg gcgggcaaag cggtcgaggc catcagcggt caatcgcttg
     5281 gcgtgtatct tgcggatcac ctgttcggac ctcttggtat gcgcgacacc gggtttcgca
     5341 tccgggacga tcagcgcgcc cgtctggcac gggttcatgc gcgcacgccg gagggaaccg
     5401 tcccgatcga ctttgaaatc ccgcaggcgc cggaattcga aatgggcggc ggcgggcttt
     5461 attccaccgt cggcgactac ctacgtttca cccgcatgat tttgggcggt ggcgcactgg
     5521 acggggtgcg cgtgctggca gcgccgaccg ttgcgcaaat gagccaaaat gccatgggcg
     5581 atctgcgttg caggccgatg aagtcggtgg cacctgattc aaccaatgat gtcgactttc
     5641 tggcagggat gcagtgggga ctaagttttc ttatcaaccc tgacgcgttg cccacagggc
     5701 gctcggctgg atcgctggca tgggccgggt tggccaattc gtacttctgg atcgatccaa
     5761 cgaagcaggt ggccggggtt tatgcagcac aaatactgcc gttcttcgat gctgacgcgg
     5821 tggcgctgtt cggcgcgttc gaaagcgcgg tttacgagat ggcgaacggc tgacgtatcg
     5881 cgcttttacg cggcttatac gattgaccga tcgaagtggg ttggattccc gtcaaggccg
     5941 gacatctcga tcggcggcat cagaccaacc ggccgaacga ccgccgtgcg cccgtccaat
     6001 gcacgcaaca tttccgtcgg tcaaacttat ctgatccgtg ccagcgccgc ctccaatcgc
     6061 gcggcctcag cctgaaacgc tgccagccgc tcgcgatttt cctcaacgac ctccggtttc
     6121 gcgcgcgaca cgaaatcggc gttggcgagt ttcaaagcga ttttcgcgcc ctcgcctgtt
     6181 gccttgtccc gcacgcccgc cagccgcttg cgttctgcgg caacgtcaat caggccctcc
     6241 aacggcaaca ccaccgtggc ttcatccagc acggcctgcg ccgatcccgc aggcatcgcg
     6301 ccgtccagag cgcgcacctc agacgctcgc gccatccgcc ggatcgcctc gatccagcgc
     6361 tcggcccgcg ccaacgtttc cggcgcagca tcacgcagca acaccggcgc aagcgcggat
     6421 ggcggcacgt tcatttccgt tcgcaccgag cgcaccagac caatcagccg caccacccaa
     6481 tccaactccg cccgcgcttc cgccgcttcc ggtaccgcaa cgaccgccgg ccacggttcc
     6541 cggatcaacg accagacacc atcgtagccg aaacgatccc acaactcctc ggttacgaac
     6601 ggcatcgccg ggtgcagcag ccgcaggatt acgcccagta catacgccgc cgttgcacgc
     6661 gtttccgccg ccactacaac gtccgcaccg tcagcgaaca ccggcttggc aaactccaga
     6721 aaccagtcgc aatacgtatt ccaaacgaaa cgatatccac cctgggcgta ttcatcgagc
     6781 cggtaatctt ccagcgctgc cgtggcttcc tcaatcgcag cattcgccgc atccaggatc
     6841 cagcggcaca atggcgatcg caccgctccc ggatcgaatc ccggcgccac gcgaatctcg
     6901 ttcatttcgc aaaaccgtgc ggcgttccac agcttggtaa cgaagccgcg ataatccttc
     6961 acccgggact cgccaagctt cacgtcccgt cccggaccgg tcagcgcaca gatggcaaaa
     7021 cgtaacgcat cggcgccata acgatcgatc agttccagcg gatcgatcgc attgcctttg
     7081 gacttcgaca tcttctggcc gcgctcgtcg cgcacgaggc cgtgaatgta caccgtccgg
     7141 aacggcacat cgcccatgaa atgcagaccc atcatcatca tccgggccac ccagaagaag
     7201 atgatgtcga acccggtcac cagcacgtcg cctggatagt accgcgccag ttccgcggtt
     7261 tgctccggcc agcccaatgt ggaaaacggc cagagtcccg aactgaacca ggtatccagc
     7321 acgtcctcat cctgaaccag tggcgcggca tgcccgtaat gggccgacgc cagcgccgcc
     7381 gcctccgcat catcgtaagc cacgaagaca tggccatccg gtccatacca ggccggaatc
     7441 cggtgtcccc accacaattg acgcgatatg caccagggct ggatatcgcg catccaggca
     7501 aagaacgtgt tttcccattg tttcggcacg aagacggtgc ggccggattc caccgcctcg
     7561 atcgccggct tcgccagcac ttcggcgttg caataccact gcgttgtcag caaaggctcg
     7621 atcggcacgc cgccgcgatc gccgtgcgga acctgatgcg tgtgcggctc gatccgctcc
     7681 accaggccca gtcgttccag ttcagcgacg atcgcgcggc gggcggcgaa ccggtccaac
     7741 ccgtccaaac cagccacgaa cgccgggtca gccacacctt caacaaacac cggctcaatt
     7801 tccgtcaacg tcacatgagc ggttttgtcc agcaccgacg gcatcggcaa agcatgccgc
     7861 cgcccaacct cgaaatcgtt gaagtcatgt gcgggcgtaa tcttcaccgc gccggtgccc
     7921 ttttccgggt cggcatactc atccgcaacg atcgggatcg cccgcccaac ca
//
LOCUS       DATAVD010000438         3282 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2647474, whole genome shotgun sequence.
ACCESSION   DATAVD010000438 DATAVD010000000
VERSION     DATAVD010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3282
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2647474"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(195..956)
                     /gene="pgeF"
                     /locus_tag="VHX39_08135"
     CDS             complement(195..956)
                     /gene="pgeF"
                     /locus_tag="VHX39_08135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HEX3991127.1"
                     /translation="MAESLHAELLPLPHGFFTRRGGVSIGPFASLNCSLSSQDDRDTV
                     LQNRSRVADTFGLSQQYLVGCTQVHGTAVVEVDVPWAPGSGPRADAMVTRRPGLALGI
                     ITADCAPVLFADAEAGVVGAAHAGWRGAVAGVIEATIDAMLRLGARTDRIVAAVGPCI
                     GQRSYEVAADLRDAVMARAPEDARFFADGSREARWQFDLPGYCATRLYAAGVAKVEVT
                     GIDTLTVEDRFFSHRRRTLAGGGPIGHQISVIAVG"
     gene            complement(1047..2081)
                     /locus_tag="VHX39_08140"
     CDS             complement(1047..2081)
                     /locus_tag="VHX39_08140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006557154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-2,3-aminomutase-like protein"
                     /protein_id="HEX3991128.1"
                     /translation="MDTPRTTMTIRDTEGLIDAGLLGPSDRTAIDAVATRYAVALTPT
                     MRALIEAPDDPIARQFVPSTEELTTAPHEHVDPIGDGRFSPVKGVVHRYADRALLKPL
                     LVCPVYCRFCFRREHVGPDGGVLTTAELEAAYAWFAAHPAVREVILTGGDPLMLSPRR
                     LSAIVSRLSAMPHIETLRIHTRVPTTDPDRVDAAMTAALDTDRSLWLVLHANHAREFS
                     EAAKAALARLRRAGIPLLGQSVLLRGVNDNAAALEALFRAMVAAWVKPYYLHQLDAAP
                     GTARFHVPIAEGQRLLAALRGRVTGLAWPTYVLDIPGGYGKVPIGPEFLLPDGGVRDP
                     GGVRHRIAEP"
     gene            2243..3256
                     /gene="epmA"
                     /locus_tag="VHX39_08145"
     CDS             2243..3256
                     /gene="epmA"
                     /locus_tag="VHX39_08145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P lysine aminoacylase EpmA"
                     /protein_id="HEX3991129.1"
                     /translation="MSSATPVWHRRSLEGRLPFLRRRAALTAASRAFFAARGYLEVET
                     PYAVPVPGEEVHLSAFATQRLHPDGRTEPLWLHTSPEFAMKRLLVGGSGPIFQFARVW
                     RNGEASALHAPEFTMLEWYRPGADMNALIDETIAFLRAVLPERVTVRGVTTSLAQAER
                     LTVADAFDRYVGADVLATEGDAAALAAQAGTRLRDKETWEDLFFRLLLERIEPKLGFG
                     VPTFLTHWPAAQAALARRDPADPRVAERFELFVCGIELANAFVELTDPVEQRNRFIAD
                     RARRHALHGADWDIDEDFLAALAEGLPQSAGIAMGFDRLAMIASGADRIGQVLWLPPA
                     DLA"
BASE COUNT          572 a         1103 c         1070 g          537 t
ORIGIN      
        1 tttcagccca gacaggcggg accgccaacg tggccaggat cagcccgggc agaatatccc
       61 gccaaatcgc aaaaagccgc gccgcacacc ccaccccgat cgtccggcac cggtcagcaa
      121 acgtcgcgca acctatgacg cgcctggtgt ccacgtattt ttccttatgg cgttccctgc
      181 agccggcagc ccactcaccc gacggcaatc accgatatct gatgtccgat cggtccgcca
      241 cccgccagcg tgcggcggcg atggctgaag aaccggtcct ccaccgtcag cgtatcgatc
      301 ccggtaacct cgacctttgc cacgccggca gcgtacaggc gggtcgcgca atagcccggc
      361 agatcgaact gccagcgtgc ctcgcgtgag ccgtcggcaa agaaccgcgc atcctccggc
      421 gcgcgagcca tcaccgcgtc gcgcaggtcg gcggccactt cgtaggacct ctggccgatg
      481 caaggaccaa ccgcggcaac gatccggtcg gtgcgggcgc caagccgaag catcgcgtcg
      541 atcgtcgcct cgatcacgcc ggcgaccgcg ccgcgccaac cggcatgggc tgcgccgaca
      601 acgccggcct cggcatcggc gaacagcacc ggcgcgcaat ccgctgtgat gatgccaagc
      661 gccaggcctg gccgccgcgt gaccatcgcg tccgcccgcg gcccgctgcc gggcgcccac
      721 ggcacatcga cctcgaccac ggcggtgcca tggacctggg tgcagcccac aaggtattgc
      781 tgcgacaggc cgaaggtgtc ggcgacgcgg gagcggtttt gcaacaccgt atcgcggtcg
      841 tcctgacttg acaggctgca gttcaggctg gcgaacggcc cgatggagac gccgccgcgg
      901 cgggtgaaga acccgtgtgg cagcggcagc aactcagcat gcagtgattc ggccatttgt
      961 gtctcgaact ggtcccgcct attcgcgcag ccgattccgg cggtcaacgg ggaaccacag
     1021 gatacccgcg gaagattgct gcccggtcac ggttcagcga tacggtgccg cacccctccc
     1081 ggatcgcgca caccaccgtc cggtagcaga aactccggac cgatcggcac tttgccatag
     1141 ccgcccggga tatccagcac gtaggtcggc caagccagcc cggtgacccg cccgcgtaat
     1201 gcggccagca ggcgctggcc ctcggcaatc ggcacgtgga accgagcggt ccctggcgca
     1261 gcgtccagtt gatgcaggta gtacggcttg acccaggccg cgaccatggc gcggaacagc
     1321 gcctccagtg ccgcagcatt gtcgttgaca ccgcgcagca gcaccgattg ccccagcagc
     1381 gggatgccgg cgcgacggag gcgggccagt gccgctttcg ccgcttcgga aaactcgcgc
     1441 gcgtggttgg catgcagcac gagccagagc gaccgatccg tgtccaatgc cgccgtcatc
     1501 gcagcatcga ctcgatcggg gtcggtggtc ggcacccgag tgtggatgcg caacgtctcg
     1561 atatgcggca tcgcggacaa ccgggaaacg atcgcgctca gacgccgtgg cgacaacatc
     1621 agcgggtcgc cgccggtcag gatcacttcc cgaaccgcgg gatgcgcggc gaaccaggcg
     1681 taagccgctt ccaactccgc tgtcgtcaac acgccgccat ccggccccac atgttcccgc
     1741 ctgaagcaaa atcggcaata cactgggcac accaataaag gcttcagcag cgcccgatcg
     1801 gcataacgat gcacgacccc cttgaccggc gagaacctgc cgtctccgat cgggtccacg
     1861 tgctcgtgcg gcgcggtggt cagttcttcg gtactgggca cgaactggcg cgcgatcggg
     1921 tcgtccggag cctcgatgag tgcgcgcatg gtgggcgtca gggcgaccgc gtaacgtgtg
     1981 gcgacggcgt cgatcgctgt gcggtccgac ggtcccagca aaccggcgtc gatcaggccc
     2041 tcggtgtcac ggatcgtcat ggttgtgcgt ggtgtgtcca tcgagaaagc ccaagaggcg
     2101 ggaaaggctg gtgggtgtaa gcgatccgcg cgatcaaatc cacggctcgc gggccggacc
     2161 aaaggggcgg agatctgctg gtggtttcaa agaacgcagg ccccgcgctt tcccggtcca
     2221 gggagtttga ctatgcaggt tcatgtcctc cgccaccccg gtctggcacc gaaggagtct
     2281 cgaaggccgc ctgccgttct tgcggcgccg cgccgcactg actgcggcct ctcgggcttt
     2341 tttcgccgcg cggggctatc tggaggtcga aacgccttac gcggtcccag tgccgggcga
     2401 ggaggtccat ctcagcgcgt tcgccaccca gcgtctgcat cccgatggcc ggaccgaacc
     2461 gttgtggctg cacaccagcc cggaattcgc catgaagcgg ctgctggtgg gcggttccgg
     2521 accgatcttt cagttcgctc gggtatggcg caatggcgag gccagcgcac tgcacgcgcc
     2581 cgagttcacc atgctggaat ggtatcggcc cggagccgac atgaacgcct tgatcgatga
     2641 aaccatcgca ttcctgcgtg ccgtgctgcc ggaacgggtg actgtgcgcg gtgtcacgac
     2701 atcgctggcg caggccgaac gcctgaccgt ggcagacgcg ttcgatcgtt acgtgggcgc
     2761 ggacgtgttg gcgaccgaag gtgatgcggc cgctctggcc gctcaggctg gtactcggct
     2821 gcgcgacaag gaaacctggg aggacctgtt ttttcgctta ttgctcgagc gaatagaacc
     2881 caaactgggc tttggcgtgc cgacgttcct gacgcattgg cccgccgcgc aggcggctct
     2941 ggcccggcgc gatccggccg acccaagggt cgcggaacgg ttcgaattat tcgtttgcgg
     3001 catcgaactt gcgaacgcat tcgtcgagct gaccgatccg gtggagcaac ggaaccgttt
     3061 tatcgccgat cgtgcacggc ggcacgcatt gcatggtgcc gattgggaca tcgacgagga
     3121 tttcctcgcc gcccttgccg aaggcctgcc gcagtcggcc gggatcgcca tggggttcga
     3181 ccggttggcg atgattgcat ccggggcgga ccgcatcggg caggtacttt ggctgccgcc
     3241 cgccgatctg gcctgagcga atacctgacg gatctcgcgt cg
//
LOCUS       DATAVD010000439         8568 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_227399, whole genome shotgun sequence.
ACCESSION   DATAVD010000439 DATAVD010000000
VERSION     DATAVD010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8568
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227399"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..519
                     /locus_tag="VHX39_08150"
     CDS             <1..519
                     /locus_tag="VHX39_08150"
                     /inference="COORDINATES: protein motif:HMM:NF039588.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX3991130.1"
                     /translation="CRLSRGRARANRAGSSSRGFMVSGLYYEEFSIGQEFDHPWTRTV
                     TEMDNVLFTTMTMNVQPLHLDADFAAKTEFGKPLVNSIFTLGLMVGVSVNDTTIGTTV
                     GNLGFSDVRFPKPVFAGDTLRSRTKVLTMRESRSRPEVGIVEFEHTCWNQRGEMVAIC
                     RRQAMMRKKPNA"
     gene            519..1670
                     /locus_tag="VHX39_08155"
     CDS             519..1670
                     /locus_tag="VHX39_08155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX3991131.1"
                     /translation="MRIFLYLLLLLVAIPAWAQAPGPPAVGVVTVEPATITETSEFVG
                     RVQAIQRVALNARVTAFLEERLFTEGTEVHAGDLLYKLERGPFEADVTNKEAAVADAS
                     ARLANATITLNRAQKLLSTPAGQQSTFDDAQAAQRSQAAQLSGAQAALRQSRINLDYT
                     EIHAPIDGEISRTAITPGNVVSPASGPLATIVSQDPMYVTFPVAVRLLTDLRNRYASR
                     GGLNAVQVRLKLPDGTPYGQTGKIDYVEPTVSVGTDTILVRAVIANPVIGAPEPGRRV
                     ERGLIDGAFVTVLVEGIQPVTSLGIPRAAVMSDQSGSYVFVVGSDSKVERRPIQLGQS
                     TPTLAVITDGLKQGEQVIVEGLQRARPGIVVKPGPIGPPPGSPQPGGRG"
     gene            1667..4852
                     /locus_tag="VHX39_08160"
     CDS             1667..4852
                     /locus_tag="VHX39_08160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3991132.1"
                     /translation="MISSVFVDRPRLAIVISILMTLAGVLAYQRIALSQFPDIVPPQV
                     TVSTTYPGASAAVVEATVAQVLESQIVGVDRMIYMKSNSANDGSYSLGVSFDLGTNAD
                     VDVVNVNNRVQAALPRLPSDVQHQGVTVRKRSTAILEFLQVYSETGDQTPLFISNYVT
                     INVLDRLARTPGVGDATLFGRLDYAMRIWFNMDRIVALGLAPSDIVSAIQQQNIQAAT
                     GRIGSRPTPETTQFQLNVATQGRLTTPEQFARIVIRANPDGSVLRVGDVARVELGAAN
                     MDTESRLNGKPAVSIGLYLAPGANAVRTSAAVEAALKDLQSRFPPGLKARVFYDSSSF
                     VADTMAEVQTTLLIAFGLVVLVVFLFLGNWRATIIPIVAIPVSLIGSIAVLMAFGYSL
                     NTISLLAMVLGIGIVVDDAIVVVENAERVMAENPDLSPQDATKKAMAQITGPVIAISL
                     VLLSVFVPIGFIPGVSGTLFRQFAVTISVAMLISAINALTLSPALCGVFLRHHGHPRG
                     PLGWMLSGIIGVCNGYAWLVRPLLRVSIISLVIIGASGGGIWLLERQTPTGFLPEEDQ
                     GAFFIAIQLPDGASLSRTRAVVQQVETLVRPMPQVEGLLSIVGFSLLDGGNQANSAFL
                     VVRLKPFQDRLGAADGARAVIGRVYGGVSQIRSANIFPFSLPPIIGLATSGGFEYQLE
                     NLEGRDPVEMASVMGGLVAAANQDPRLTRVFATFTATNPAVWLDIDRDKTQALGVGVS
                     DVFNTLQTTLGGYYINDFNLFGRTWEVILQADAADRSDISAIDRIYVRDKAGDMIPLR
                     SVASLRFVLGPQVISRFNNYRAVTVNGGPRAGVSTGDALHAMAELSARTLPTGYGYEW
                     SGTAYQEIQSQGQTFGILSLAVLFAYLFLVALYESWIIPIPVLLTVAVGVLGAFAGLL
                     ISGLSLDLYAQIGMVVLISLAAKNGILIVEFCKELRQAGMSIREAALLGGRMRIRAVL
                     MTSLAFIVGLIPLVWAHGAAMLSRRAVGTAVFAGMIVATCIGVFLIPMLYVVFQTFRE
                     KAKEYLARSRAPSEKHRVAEVDRNVATGYDD"
     gene            4939..7260
                     /locus_tag="VHX39_08165"
     CDS             4939..7260
                     /locus_tag="VHX39_08165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3991133.1"
                     /translation="MATTKFGLAQPVRRVEDPRLLKGMGRYTDDIVLPGMLHGIVLRS
                     PHAAATILSMNLSTATSMPGVRAIYIAADLTAAGLGSLPCAAPVQNKDGTDMASPAHP
                     VLADGAVHHVGDPVAFIVADTAKQARDAAELVQVDYEVLASATDLATAMDPDTPGVWP
                     DVKNNVVFDWEIGDKAATDAAFAGAAHVTKLTVVNNRIVVASMEARVAIADHDPATGR
                     WTLYANTQGGWLLKNLIGPLFNTDPENFRIVTPDVGGGFGMKLFLYAEHVLTCFAARA
                     LGCPVKWAADRTEAFLCDTQGRDNITTGELAIDADGKFIALRTRNISNMGAYLSTFAP
                     YIPTYAGTSVLSSVYGFKAIYANILGVFTHTVPVDAYRGAGRPEANYLVERLVDAAAR
                     ELTIDRIELRRRNMVPPSAMPHATPVGKTYDSGDFQVVMDAALQKIDYAGFASRQAAA
                     AVLGRRRGMGLAYYLEATGGDPTERAEIRFVDDGFVDVYVGTQSTGQGHETAYVQLTA
                     NRLGIDGDKIRIRQGDTDTIPVGGGTGGARSLYSEGQAIVKTADAVIEKGKQAAAEAL
                     EAAVADITFSDGNFSIVGTDRSIDIISLAAGQRRKAASGQPAITLDTAEVAAIDNHTF
                     PNGCHMAEVEIDPETGVITVMRYVVCDDFGTTVNPLIVRGQVAGGVAQGLGQAILEHT
                     VFDRDSGQLLSGSFMDYALPRADDLPDVEVDLLEIPCATNPLGVKGAGEAGAVGSPPA
                     LINAVIDALRVDGVTSIDMPATPERVWRALASA"
     gene            complement(7263..8288)
                     /locus_tag="VHX39_08170"
     CDS             complement(7263..8288)
                     /locus_tag="VHX39_08170"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3991134.1"
                     /translation="MLARVVLAAVALLAARPANTYALTIVTRGEASQSAIADALVRPF
                     TQATDIAVQQDTWGGGMDLLKTKATEGAWDLVEVNADELNAGCADGSFEKLDWSTIGG
                     KDHYLPIAVSDCGVGATLHNIVLAWDRDKFQATPTWADFWDVAKIPGKRGLGKSVRGA
                     LEIALLADGVAPGDVYKTLGASDGVDRAFRKLDQLKPYIVWWQTPAEAAKILGSGDVL
                     MTTTPSDVIVMANRAEKRNFGVQFNASLYDPRSWVIMKGAQNLREAQQFLYLTGASAL
                     QARLFRVSGEAGLARGVNDWLTPDQQAISPTVPANMNGALRVDNAFWRDNLAKLRTRF
                     EAWLSQQ"
     gene            complement(8380..>8568)
                     /locus_tag="VHX39_08175"
     CDS             complement(8380..>8568)
                     /locus_tag="VHX39_08175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991135.1"
                     /translation="RIARTFSEVKGKKIGQVVAQNGSSLVIHGQGGFIEVHRVRWDGG
                     RKVAATEAELPVDTILGS"
BASE COUNT         1551 a         2654 c         2646 g         1717 t
ORIGIN      
        1 tgcagattgt cacgaggtag agcccgagca aaccgggccg gatcatcatc acgggggttc
       61 atggtgtctg ggctgtacta cgaggaattt tcgatcggtc aggaattcga ccatccgtgg
      121 acgcgcaccg tcacggagat ggacaacgtg ttgttcacga ccatgacgat gaacgtgcag
      181 ccgctgcacc tcgacgcaga cttcgctgcc aaaaccgagt ttggcaaacc actggtcaac
      241 tccatcttta cgcttggcct catggtcggc gtatcggtca atgacacgac gatcggcaca
      301 accgtcggca atctcggttt ttccgacgtc cgctttccca agccggtatt tgccggagac
      361 acgctccgct cccgcaccaa agtattgacc atgcgtgaaa gccggtcccg gcctgaagtc
      421 ggcattgtcg agttcgagca cacctgctgg aatcaacgcg gcgagatggt cgcgatctgc
      481 cgccgtcagg cgatgatgcg caaaaagccg aacgcctgat gcgcattttc ctatatttgc
      541 tccttctgct cgtggcgatc ccggcctggg cacaagcacc tggcccacct gcagtcggcg
      601 tggtgaccgt cgagcccgcc accatcaccg aaacctccga attcgtcggc cgtgtgcagg
      661 cgatccaacg ggtggcgctg aatgcccgcg tcactgcctt tctggaggaa cgcttgttca
      721 ccgaaggcac cgaggtccac gccggcgatc tgctctacaa gctggaacgc ggcccgttcg
      781 aggccgatgt cacaaacaag gaagccgctg tcgccgatgc cagcgcgcgt ctggccaatg
      841 caaccatcac gctcaaccgc gcacaaaaac tgctgtccac ccccgccggg caacaatcga
      901 ccttcgatga cgcccaggcg gcgcaacgtt cgcaggcggc gcaactttct ggcgcgcagg
      961 ccgcgctgcg acagtcgcgg atcaatctgg actacaccga aatccacgcg ccgatcgacg
     1021 gtgagatcag ccgcaccgcc atcacgccgg gcaatgtcgt ttcgcccgcc agtgggccct
     1081 tggcgacgat cgtcagccag gaccccatgt atgtcacgtt tccggtcgcg gtccggttgc
     1141 tgactgatct gcgcaaccgt tatgccagtc gcgggggact gaacgcggta caggtgcggc
     1201 tgaaactccc cgacggcacg ccgtacggtc agaccggcaa gatcgattat gttgagccca
     1261 ccgtctccgt cggcaccgat accattctgg tccgcgcagt tatcgccaat cccgtgatcg
     1321 gcgcacccga gccaggccgg cgggtcgagc gcggactgat cgatggtgcc ttcgttactg
     1381 tcctggtcga gggcattcaa ccggtgacct ccctcggaat tccgcgcgcc gcagtgatgt
     1441 cggaccagag cggcagctat gtcttcgttg tcggtagcga cagcaaggtg gaacgccgtc
     1501 cgatccaatt gggtcagtca actcccacat tggcagttat cacagacggc ctgaaacagg
     1561 gtgagcaggt catcgtcgaa ggattgcaac gcgcacggcc tggcattgtg gtcaaacccg
     1621 gtccgatcgg gccgccaccg ggtagccccc aaccgggtgg acggggatga tctcctcggt
     1681 ctttgtcgat cggccaagac tggcaatcgt catctcgatt ttgatgacgc tggctggagt
     1741 gcttgcctat cagcggatcg cgctgtcgca gttccccgac atcgtgccgc cgcaggtgac
     1801 ggtatcaacc acctaccccg gtgcatccgc cgctgtggtc gaggcaaccg tcgcacaggt
     1861 gctggaatcg cagatcgtcg gcgtcgaccg catgatttac atgaagtcga acagcgccaa
     1921 tgacggcagt tacagcctcg gggtgtcgtt cgacctcggc accaatgccg atgtcgacgt
     1981 ggtcaacgtc aacaaccgcg tgcaggcggc attgcccagg ttgccgtcgg atgtgcagca
     2041 tcagggcgtg acggtgcgga aacggtcgac cgccattctc gaatttctcc aggtttacag
     2101 cgagaccggc gaccagacgc cgctgttcat cagcaactat gtcacgatca acgtgctgga
     2161 ccggctggct cgcacgccgg gcgttggtga tgcgacattg ttcggccggc tggattacgc
     2221 gatgcggatc tggttcaaca tggaccgcat cgttgccctg ggcctggcgc catccgacat
     2281 cgtcagtgcg atccagcaac agaatattca ggcggcaacc ggacggatcg gctcgcggcc
     2341 aacgccggaa accacccagt ttcagcttaa cgtggccact cagggacgtc tgaccacgcc
     2401 tgagcaattt gctcggatcg tgatccgggc caatcctgac ggctccgtgc tgcgggtcgg
     2461 cgacgtcgca cgcgtcgaac ttggcgccgc caacatggac accgaaagcc ggttgaatgg
     2521 caaacccgcc gtctcgatcg gactttatct cgcgccggga gccaacgcgg tgcggacctc
     2581 ggcggccgtc gaggcggccc tcaaggattt gcagtcgagg tttccgcccg gcctgaaagc
     2641 ccgggtgttt tacgacagca gcagctttgt cgccgataca atggcggagg tgcagacgac
     2701 gttgctgatc gcctttggcc tcgtcgtgct ggtggtgttt ctgtttcttg gcaactggcg
     2761 cgccaccatc atcccgatcg tggcgatacc ggtcagtctg atcggttcga tcgccgtgct
     2821 gatggccttt ggctattcgc tcaatacgat ttccttgctc gcgatggtgc ttgggatagg
     2881 catcgtcgtc gatgacgcga ttgtcgtggt ggaaaacgcc gaacgggtga tggcggaaaa
     2941 tcccgacctt agcccgcagg acgcgaccaa aaaggcgatg gcgcagatta ccggaccggt
     3001 cattgcgatt tccctcgtgt tgctgtcggt gtttgtaccg atcgggttta ttcccggcgt
     3061 gtccggcacg ttgttccgcc agtttgcggt aaccatcagc gtggcgatgc tgatttccgc
     3121 aatcaacgcg ttgacgttgt cgcccgcttt gtgcggcgtt tttctacgcc atcacggcca
     3181 tccacgtggt ccactgggct ggatgctcag cgggattatc ggtgtttgca acggttacgc
     3241 gtggctggtg cggcccttgt tgcgggtgtc gattataagt ctggtcatca tcggcgcttc
     3301 cggcggcggc atctggctgc tggaacggca aacgccgacc ggatttctgc cggaagaaga
     3361 ccagggtgcg ttcttcattg cgatccagtt gccggacggg gcgtcgttgt cgcgcacacg
     3421 cgcggtcgtg cagcaggtcg agactctggt ccggccgatg ccgcaggtgg aggggctgtt
     3481 atcgatcgtc ggcttctcgt tgctggatgg cggcaatcag gcgaactcgg cgtttctggt
     3541 ggtgcgcctg aagccattcc aggaccggct tggtgctgcc gacggcgcgc gggccgtgat
     3601 cggccgcgtc tacggcgggg tcagccagat ccgatcggcc aacattttcc cgttcagttt
     3661 gccgcctatc atcggcctcg cgaccagcgg cggcttcgaa tatcagttgg agaaccttga
     3721 gggccgcgac ccggtcgaaa tggcgagcgt catgggcggc ctggttgccg cggccaatca
     3781 ggatccacgg ttgacccggg tgttcgccac cttcacggcg acaaaccctg cggtctggct
     3841 ggacatcgat cgtgacaaga cgcaggcgct cggtgttggg gtttcagacg tgttcaatac
     3901 gttacaaacc acgcttggcg gctactacat caacgacttc aatttgttcg gccggacctg
     3961 ggaggtcatc ctgcaggccg acgcggcgga tcgcagcgat atttcggcaa tcgaccggat
     4021 ttacgtgcgc gacaaagcag gcgacatgat tccgttacgt tcggtggcgt cgttgcggtt
     4081 cgtactggga ccgcaggtga tcagccggtt caacaattat cgtgcggtaa cggtgaatgg
     4141 tggaccgcgc gcgggcgtgt cgacgggcga tgccttgcac gcgatggccg agctttcagc
     4201 gcgcaccttg ccgaccggct acggctatga gtggtcgggt accgcctacc aggaaatcca
     4261 gtcgcaaggc cagacgtttg gcattctgtc gctcgcggtt ttgtttgctt atctgtttct
     4321 ggtggcgctg tacgagagct ggatcatccc gatcccggtg ctgctgaccg ttgctgtcgg
     4381 ggtcttgggc gcctttgccg gtttgctgat atcgggactt tcgcttgatc tctacgctca
     4441 gatcggcatg gtcgtgctga tctcgctggc ggccaagaat gggatcctga tcgtcgaatt
     4501 ctgcaaggag ttgcggcagg ccgggatgtc catccgcgag gcggcgctgc ttggcggacg
     4561 gatgcgcatt cgagccgtgc tgatgacatc gttggcgttc atcgtcggat tgatcccgtt
     4621 ggtctgggcg catggggcgg cgatgctgag ccggcgcgct gttggcacag cggtgttcgc
     4681 aggcatgatc gttgccacct gtatcggggt atttctcatt ccaatgttgt acgtcgtgtt
     4741 ccagacattt cgcgagaagg cgaaggaata cctggcacgc tccagggcac cgagcgagaa
     4801 gcaccgcgtg gctgaggtcg accggaatgt ggcaaccggc tacgacgatt gagcctgtgg
     4861 ctttgccaac cggtgcgttg gccatgactt tgcacgctga cgctggcatg ctccggtcgt
     4921 aaccgcggag acacggtcat ggcgacgacg aaatttggcc ttgcgcaacc tgttcgccgg
     4981 gtcgaggacc cgagactcct gaaaggcatg ggccgctaca ccgacgacat cgtgctgccc
     5041 ggaatgttgc atgggatcgt gctgcgtagc cctcacgccg cggcgacgat cctgtcgatg
     5101 aacctgagca ccgcaacgtc gatgccgggt gtccgcgcca tttacattgc tgccgacctg
     5161 acggccgcgg gtctgggctc cctgccctgc gccgcaccgg tgcagaacaa ggacggcacc
     5221 gacatggcca gtcctgccca tccggtgctg gcggacggtg cggttcatca cgtcggcgat
     5281 ccggtcgctt tcattgttgc cgacaccgcg aagcaggccc gcgacgcggc ggaactggtt
     5341 caggtcgatt atgaggtgct ggcttccgcc accgatctgg caaccgccat ggatccggac
     5401 acgcccggtg tatggccgga tgtgaagaac aacgtggtgt tcgactggga gatcggtgac
     5461 aaggctgcga ccgatgccgc gtttgccggt gccgcgcatg tcacaaagtt gacagtggtg
     5521 aacaaccgga tcgtcgtcgc atcgatggag gcacgcgtcg ccatagccga ccatgacccg
     5581 gccaccggcc gttggaccct gtatgccaac acccagggtg gctggctgtt gaagaacctg
     5641 atcggtccgt tgttcaatac cgatccggaa aattttcgca ttgtgacccc cgatgtcggc
     5701 ggcggtttcg gcatgaaatt gtttctctat gccgaacacg tgctaacctg tttcgctgcc
     5761 cgcgctttgg gctgtccggt caagtgggcc gcagatcgaa ccgaagcatt cctgtgcgac
     5821 acccagggcc gtgacaatat caccaccggc gaactggcga tcgacgccga cggaaaattc
     5881 atcgcactac ggacccgtaa catctccaac atgggtgcat atctttccac tttcgcaccc
     5941 tatatcccga cttatgccgg caccagcgtg ctatccagcg tctatggctt caaggcgatc
     6001 tacgccaata tccttggcgt gttcacccac acggtgccgg tcgacgccta tcgcggcgcg
     6061 ggccggcccg aggccaacta tctggtcgag cgtctggtcg atgccgccgc ccgcgaactg
     6121 accatcgacc gcattgagtt gcgccgccgc aacatggtgc caccctcggc catgccgcat
     6181 gcgacgccgg tcggcaagac atacgacagc ggggattttc aggtcgtgat ggatgccgcg
     6241 ctacagaaaa tcgattatgc cggcttcgca tcccgccagg ccgccgcagc tgtactgggt
     6301 cgacgccgcg gtatgggcct cgcctattat ctggaagcaa ccggtggcga tcccaccgaa
     6361 cgcgcggaga ttcgtttcgt tgatgacgga tttgtcgacg tttatgtcgg cacccaatcc
     6421 accggccagg gacacgagac cgcctatgtc cagttgaccg ccaaccggct tgggattgac
     6481 ggcgacaaga tccggatacg ccaaggggac accgacacca tcccggtcgg aggcggtacg
     6541 ggcggcgccc gcagccttta ctccgaaggc caggcgatcg tgaaaaccgc cgacgccgtc
     6601 atcgaaaagg gcaaacaggc tgcggcggag gcgcttgagg cggcggtcgc cgacatcaca
     6661 ttcagcgatg gcaatttctc catcgtcggg acggatcgca gcatcgacat catcagcctc
     6721 gccgccggtc agcgccggaa agcggcgtcc gggcaaccgg cgattaccct ggatacggcc
     6781 gaggtcgccg cgatcgacaa tcacacgttc cccaacggct gccatatggc cgaggtcgag
     6841 atcgaccccg aaaccggtgt catcaccgtc atgcgctatg tcgtttgtga tgactttggc
     6901 acaacggtga acccgttgat cgtccgtggc caggtggcgg gcggcgtggc acagggactc
     6961 ggccaggcga ttctggagca caccgtgttc gaccgggatt caggccagct gctgtccggc
     7021 agtttcatgg actacgcttt gccgcgggcc gatgatctgc cggacgtcga agtggatctg
     7081 ctggagatcc cctgcgccac caatcctctt ggcgtgaagg gcgccggcga ggcgggtgca
     7141 gtcggcagtc ctccggcgct gattaacgcc gtcatcgacg cgctgcgggt cgacggcgtg
     7201 acctcgatcg acatgccggc gacaccggaa cgggtttggc gagcgctcgc ctcggcatag
     7261 cgctattgct gcgacagcca ggcttcgaat cgggtacgga gcttcgccag attgtcgcgc
     7321 cagaaagcgt tgtccacgcg caacgcgccg ttcatattgg ccggcacggt cggcgatatg
     7381 gcctgctgat ccggggtcag ccagtcattc acccctctcg ccagaccggc ctcaccgctg
     7441 acccggaaca atcgcgcctg caaagcggac gccccggtta aatacagaaa ctgctgtgcc
     7501 tcgcgcaggt tttgcgcacc cttcatgatc acccaggaac gcggatcgta caggctggca
     7561 ttgaactgga caccgaaatt ccgtttctcg gcccggttcg ccatgacgat cacatcactg
     7621 ggggttgtcg tcatcagcac atcgcccgag cccagaattt tcgcggcctc ggcgggagtt
     7681 tgccaccaga cgatgtacgg cttcagctgg tccaacttgc gaaacgcacg atctacgccg
     7741 tcggaagcgc ctagcgtctt gtagacatca cccggggcca ccccatcggc cagcaacgcg
     7801 atctccagcg cgccacgcac acttttgcca agcccgcgtt tgccggggat cttcgccaca
     7861 tcccagaaat cggcccaggt gggggtggcc tgaaatttgt cacggtccca ggcgaggaca
     7921 atgttgtgca gtgttgcgcc gacgccacaa tcgctgaccg ctattggcag gtaatgatct
     7981 ttcccaccga tcgtcgacca gtcgagtttc tcgaatgatc cgtcggcaca gccggcgttc
     8041 agttcgtcag cgttgacctc gacaaggtcc catgcccctt cggtcgcctt ggttttcagc
     8101 aaatccatgc cgccgcccca cgtgtcctgc tgaaccgcga tgtcggtcgc ctgggtgaac
     8161 ggccggacga gcgcgtcggc gatggcggac tggctggcct caccgcgggt cacgatcgtc
     8221 agggcatatg tgttggccgg ccgcgcggcg agcaacgcca cagcggccag tactacgcga
     8281 gcaagcatga agcgtccggt ccgggttcca ggtcagccgc cggacgctac agtcaggcgc
     8341 ggttctcggc aacgactcgt acctattcac ccacctgggc tatgatccga ggatcgtatc
     8401 caccgggagt tccgcctcgg tcgcggccac ctttctgccg ccgtcccaac gaacccgatg
     8461 cacctcgatg aaaccgccct gtccatggat gacgaggctg gagccgttct gcgccacgac
     8521 ctgaccgatt ttcttgcctt tcacctccga gaaggtgcgg gcaatccg
//
LOCUS       DATAVD010000440         2205 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_227423, whole genome shotgun sequence.
ACCESSION   DATAVD010000440 DATAVD010000000
VERSION     DATAVD010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227423"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VHX39_08180"
     CDS             complement(<1..363)
                     /locus_tag="VHX39_08180"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX3991136.1"
                     /translation="MKPSTTRTELTSVGRGTLMGELLRRYWHPVGLSADAGDVPRKVR
                     ALGEDLILFRNRHGRAGLLHARCCHRGTTLYYGKVEEDGIRCCYHGWKFDTEGRCLEQ
                     PCEPEGGQFKDKVRQPWYP"
     gene            575..1063
                     /locus_tag="VHX39_08185"
     CDS             575..1063
                     /locus_tag="VHX39_08185"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX3991137.1"
                     /translation="MPEAKAGPADELAPITAMMSSRLMVLANLLKRGAILRYKRLAGL
                     SSVEFGLVASLGRRPPMSVVRLAEAVGMDKGQISRALSELVSRKLVARAVNPRDNREV
                     LVSLTRAGLVAHDAVLAGALERNQRLLAGLSHGELTGLLGHINGLTETAAQMLAAEKD
                     LS"
     gene            1270..1635
                     /locus_tag="VHX39_08190"
     CDS             1270..1635
                     /locus_tag="VHX39_08190"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEX3991138.1"
                     /translation="MTGILQNYLPLVVFIGVASIIGLVLLIAPFVVAFQQPDPEKLSA
                     YECGFNAFDDARMKFDVRFYLVAILFIIFDLEVAFLFPWAVAFGKLGATGFWSMMVFL
                     AVLTVGFAYEWKKGALEWD"
     gene            1698..>2205
                     /locus_tag="VHX39_08195"
     CDS             1698..>2205
                     /locus_tag="VHX39_08195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HEX3991139.1"
                     /translation="MTGRPVGANDPYFLEVNHELSDKGFFVAAADDLITWARTGSLMW
                     MTFGLACCAVEMMQVSMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYD
                     QMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPIDIYVPGCPPTAEALLYGVLLL
                     QKKIRRIGT"
BASE COUNT          368 a          656 c          725 g          456 t
ORIGIN      
        1 cgggtaccag ggctggcgca ccttgtcctt gaactggccg ccctcgggtt cgcagggctg
       61 ttccaggcaa cggccttcgg tatcgaattt ccagccgtgg tagcagcagc ggatgccgtc
      121 ttcctcgacc ttgccgtaat acagcgtggt gccgcgatgg cagcagcggg catggagcag
      181 gccggcccgg ccatggcggt tccggaacag gatcagatcc tcgcccagcg cgcggacctt
      241 gcgcggcacg tcgccggcgt ccgccgaaag cccgaccggg tgccaatagc ggcgcagcag
      301 ttcccccatc agggtgccgc ggcccactga agtgagctcg gtccgggtgg tggagggttt
      361 catcgcttag gcggtgccga gatcgcgatc ccgctgggtg atgttcacag ccgccctccc
      421 gccgcgacga cggttcgcgg tcattggtta tctctggcaa gtgaaccgga ggtagatgac
      481 aatgtcaacg atctcgcggg ctggttttag gcttggcagg gatgggcttt gttggcagag
      541 gttggcgatg gaccagagac cgaaaaacgc tgcgatgccc gaggctaagg ccggccctgc
      601 ggacgagctt gctccgatca ccgcaatgat gtcgtcgcgg ctgatggtgc tggccaattt
      661 gctgaagcgg ggcgccatct tgcgttacaa gcgcctggcc ggtctttcat cggtggaatt
      721 cgggctggtg gcctctttgg gccgccggcc gccgatgagc gtggtccggc tggccgaggc
      781 ggtcggcatg gacaagggac agatcagccg cgcactgagc gaactggtgt cccgaaaact
      841 ggtcgcgcgg gcggtcaacc caagggataa ccgcgaggta ctggtcagcc tgacccgggc
      901 ggggctggtc gcccatgatg cagtcctggc cggcgcgctg gaacgcaatc agcgtttgct
      961 ggcggggttg agccatgggg aactgacggg gctgctgggg catatcaatg gtctgactga
     1021 gaccgccgcg caaatgctgg ccgccgagaa agatttgagc tgaaccgaat atccgggtcg
     1081 cccggaacgg aattggcatt gtcttgcata ttcctgatgc gcgaagacgg tgcgtattcc
     1141 gcatggtctg ggggcggctg gtaccgtcaa gatagcttgt cttgcgcccc ttgttgcgct
     1201 gcgctaagcc tcagaataat tccaatcaac gaatctgcgg ggcggaaacc gcgggaaaag
     1261 gcagcgccga tgaccggcat cttgcagaat tatctccccc tcgtggtttt tatcggtgtc
     1321 gcgagcatca tcggtctggt gctgctgatc gcccccttcg tggtcgcgtt ccagcagccc
     1381 gatccggaaa aactgtccgc ctatgaatgc ggattcaacg cttttgatga cgcccgcatg
     1441 aagttcgacg ttcgcttcta tctggtggcg atccttttca tcatcttcga cctcgaagtg
     1501 gccttcctgt ttccgtgggc cgtggcattc ggcaagctcg gtgccaccgg cttctggtcg
     1561 atgatggttt tcctggccgt cctcaccgtc ggctttgcct atgaatggaa gaaaggcgcg
     1621 ctcgaatggg attgagccct gctgccacca cccacagacc cgcggtcgcc ccggccgcga
     1681 ccggcgttct cgatccgttg accgggcggc ctgtcggcgc caacgatccc tattttctcg
     1741 aggtcaatca cgaactgtcc gacaagggct tcttcgttgc cgccgccgat gacctgatca
     1801 cctgggcgcg gacgggatca ctgatgtgga tgaccttcgg tctggcctgc tgcgcggtcg
     1861 agatgatgca ggtctcgatg ccgcgttatg acgtcgagcg attcggtttt gcgccgcgcg
     1921 cctcgccgcg gcagtccgac gtgatgatcg tggcgggcac cctgaccaac aagatggcgc
     1981 cggctctgcg caaggtctac gaccagatgc cggagccccg ttacgtgatc tcgatggggt
     2041 cgtgcgccaa tggcggcggt tactatcact attcctattc ggtggtgcgc ggctgcgacc
     2101 gcatcgtgcc gatcgatatc tacgtgcccg gatgcccgcc gacggcggaa gcgctgcttt
     2161 acggcgttct gttgctgcaa aagaagatcc ggcgcatcgg aacca
//
LOCUS       DATAVD010000441         4266 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2832169, whole genome shotgun sequence.
ACCESSION   DATAVD010000441 DATAVD010000000
VERSION     DATAVD010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4266)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4266
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2832169"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..540
                     /locus_tag="VHX39_08200"
     CDS             <1..540
                     /locus_tag="VHX39_08200"
                     /inference="COORDINATES: protein motif:HMM:NF024592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4010 domain-containing protein"
                     /protein_id="HEX3991140.1"
                     /translation="GIILATSVMYPRLLIVVWLFNQPLAWALAPILLGLSALGFLLAG
                     AWQWVGRERQKADTPIAPPANPLGLGTAATFALLFVAVSIASYWAEQQFGTAGVYTLA
                     AVVGISDINPFVLSLAQHGEGMTSGVGATAIVVATASNNLFQAAYATAYSGGRTGLVP
                     PVTSAVLAACGIGLAFVLR"
     gene            complement(551..2965)
                     /gene="ppsA"
                     /locus_tag="VHX39_08205"
     CDS             complement(551..2965)
                     /gene="ppsA"
                     /locus_tag="VHX39_08205"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: protein motif:HMM:NF005057.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008986 - pyruvate, water dikinase
                     activity [Evidence IEA];
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HEX3991141.1"
                     /translation="MTSSSAYVRWFDRIRLEDVPLVGGKNASLGEMYQSLGSAGVRVP
                     NGFALTAASYRDALTQADAWPRLHQLLDTFDIRDLKALAERAAEARAIVYAATGTAAL
                     RQDIANAYGKLEAEYGKGVAVAVRSSATAEDLPNASFAGQHESYLNVSGADDLFEACR
                     LCFASLFTDRGIVYRVNNGFDHFKVALSVGVMKMVRSDQATSGVIFTLDTESGFRDVV
                     FITGAYGLGENVVQGTVDPDEFFVHKPTFRQGHRAVLRRTLGQKQLRLTCAAGHIAAS
                     TLNVPTEAAERVRFCLNDAEVIELADNAIRIEDHYSTLAGHAMPMDIEWAKDADDGRL
                     YIVQARPETVASRRETGFFESYTLTGNAPVLVRGKAVGEKIGTGVVRVIAKAADLREF
                     KPGEVLVASATSPDWEPVMKTAGAIITDRGGRTCHAAIVARELGVPAVVGSENATRAL
                     QTGTVVTVSCADGENGTVMAGTVPFEVTRVPMSTLALPKTEIMVNLGNPDLAFHTAMM
                     PNAGVGLARMEFIISEHIGVHPMALVHPEKVTPEDQARIDALSRGYASPREFFVRTLA
                     EGVGTIAAAFYPRPVIIRLSDFKTNEYASLVGGAAFEPVEANPMLGFRGAARYAHPAY
                     ADGFALECEALRRVRDDMGLTNLRVMVPFCRRVEEAKRVLETMALHGLERGRNGLEVF
                     VMCEIPNNVIQVDAFAAIFDGFSIGSNDLTQLTLGVDRDSEIVAFDFDERDPGMLEML
                     RLAVNGARRNHRHVGICGEAPANYPEIARYLARLGIDSISVNPSSLVRTIAVVQEAEA
                     AVPHAA"
     gene            3087..>4266
                     /locus_tag="VHX39_08210"
     CDS             3087..>4266
                     /locus_tag="VHX39_08210"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX3991142.1"
                     /translation="MSRIRKPATVGPSTAAEFGMVALEGFDRLSEQNSSGPTPMPTDQ
                     ARAWLSAIAEFTDDAIIGKNLNGIVISWNKAAAAMFGHAADEIVGQPITAIIPPERLD
                     EEVLILERVRRGERLVHFETERQRKDGTIIPVTLTISPIRDDSGAIIGVSKIARDLSE
                     QTRAHQALRQREALLSSILDTVPDALIVINEQGHIQSFSAAAARLFGYDATEVLDRNV
                     SMLMPSPYRQEHDSYLTRYLTTGERRIIGIGRVVVGLRKDGTTFPMELAVGAVSLPGE
                     RLFTGFIRDLTERQDREHRLHELQSELIHVSRLNDLGLMVSALAHEVNQPLAAMANYI
                     NGARRLFAAGNQAGGQQAIERVAEQADRARQIIRRLRDLVKKTESEKQRESVPVTIEE
                     A"
BASE COUNT          821 a         1348 c         1299 g          798 t
ORIGIN      
        1 ggtatcatcc tcgcgacctc tgtaatgtac ccgcggctgc tgatcgttgt ctggctgttc
       61 aatcagcctt tggcgtgggc actggccccg atccttctgg gcttgtcggc actgggattt
      121 ctgctggccg gcgcatggca gtgggtcggc cgggagcgcc agaaagccga tacgccgatt
      181 gccccgcccg ccaacccact tggtctgggc acggcagcga ctttcgcgct gctcttcgtc
      241 gcggtgtcga tcgcttcgta ctgggcggag cagcagttcg gcaccgccgg tgtctacact
      301 ttggcagcag ttgtcggcat atcggacatc aatccgttcg ttttgagtct ggcccaacat
      361 ggcgaaggca tgacgagcgg ggtcggagcg accgcgatcg tggtggcaac tgcctcgaac
      421 aatttgtttc aggcggctta tgcgacggcc tattccggcg gccgcaccgg attggtaccg
      481 ccagtcacct cggcagtact cgcggcttgc ggcatcggcc tggcgttcgt gctaagataa
      541 ccctgtccaa tcacgcggca tgcggcaccg ccgcttccgc ctcctgcacc acggcaatcg
      601 tccgcaccag actcgacggg ttcacgctga tcgagtcgat gccaagcctc gcgagatacc
      661 ttgcgatctc cggataattg gcaggtgcct caccgcagat cccgacatgg cggtggttgc
      721 gccgcgcgcc attgaccgcg agccggagca tttccagcat gcccggatcg cgctcgtcga
      781 aatcgaacgc cacgatttcg gaatcccggt caacgccaag cgtgagttgc gtgaggtcat
      841 tggagccgat cgagaacccg tcgaatatcg ctgcgaaggc gtcaacctga atcacattgt
      901 tgggaatttc gcacatcacg aagacttcga gcccattgcg cccgcgttcc agaccatgca
      961 acgccatggt ttccagcaca cgtttcgcct cttcgacccg gcggcagaac ggaaccatga
     1021 cacgcaggtt ggtcaggccc atgtcgtcgc gaacccggcg cagtgcctca cattcaagtg
     1081 cgaacccatc ggcgtaggcc gggtgcgcgt aacgtgcggc gccacggaag ccgagcatcg
     1141 gattggcttc caccggctcg aacgccgcac cgccgaccag gctggcgtat tcgttggtct
     1201 tgaagtcgga cagccgaatg atcaccggtc gcggataaaa cgcagcagcg atggtgccga
     1261 caccctcggc cagcgtgcga acaaagaact ctcttggtga cgcataacca cggctcagcg
     1321 cgtcgatgcg tgcctggtct tccggagtga ctttttcggg gtgcaccagg gccatcggat
     1381 gaacgccgat gtgctcgctg atgatgaact ccatgcgggc caacccgacg ccggcattcg
     1441 gcatcatcgc ggtgtggaac gcgaggtcgg gattgcccaa attcaccatg atttcagttt
     1501 taggcagtgc cagtgtgctc atcggcacac gggtcacctc gaacgggaca gtgcctgcca
     1561 tgaccgtgcc gttctcaccg tcggcgcacg agaccgtaac aacggtaccc gtctgcaagg
     1621 cccgggtcgc gttctccgaa cccaccacgg ccggtacgcc aagttcgcgg gcgacaatag
     1681 cggcgtgaca agtgcgtccg ccgcggtcgg taatgattgc gccggcggtt ttcatcaccg
     1741 gctcccagtc cgggctggtg gcgctggcaa ccagcacctc accgggcttg aattcgcgca
     1801 ggtcagcggc tttggcgatg acacgcacta caccggtgcc gatcttttcg ccgaccgcct
     1861 tgccacgcac caacaccggt gcgttgccgg tcagcgtgta actttcgaag aatccggtct
     1921 cgcgccgcga cgccaccgtt tcgggtcgtg cctgtacaat gtaaagcctg ccgtcgtcgg
     1981 catccttcgc ccattcgatg tccatcggca tggcgtggcc ggcaagggtg gaatagtgat
     2041 cctcgatgcg gatcgcgttg tccgccagct cgatcacctc ggcatcgttc agacagaacc
     2101 gtacccgttc cgctgcttcc gtcggtacat tcagcgtgct ggcagcgata tgaccggcgg
     2161 cacaggtcag ccgcaactgc ttctggccga gcgtgcgtcg cagcactgcg cgatggcctt
     2221 gcctgaatgt cggtttatgc acaaagaact cgtccggatc gacggtgccc tggaccacat
     2281 tctcgcccaa tccgtaggcg ccggtgatga atacgacgtc gcggaaaccg gactcggtgt
     2341 ccagagtgaa gatcacccca ctcgttgctt ggtcggaacg caccattttc atgacaccga
     2401 ccgacaatgc aactttgaaa tgatcgaagc cattattcac ccggtaaacg ataccgcggt
     2461 cggtgaacaa ggaagcgaaa catagccggc acgcctcgaa caaatcatcg gcgccactga
     2521 cattgagata gctttcgtgc tgcccggcga agctggcgtt cggcagatcc tcggcggttg
     2581 cagaactgcg aaccgcaacg gcgacgcctt tgccgtactc ggcttccagt ttgccataag
     2641 cgttcgcgat atcctgccgc aacgctgcgg tcccggtggc ggcgtacacg atcgcgcgcg
     2701 cttctgcagc tcgctcggcc agcgccttca aatcgcgaat atcgaaggta tcgagcaatt
     2761 ggtgcaaccg tggccaggcg tcggcctggg tcagagcatc gcgatagctc gcggcggtca
     2821 gcgcgaaacc attgggaacg cgcacgccag ccgagccaag cgactgatac atctcgccaa
     2881 gcgaggcgtt cttgccgccg accaggggaa cgtcctccaa ccggatgcgg tcgaaccacc
     2941 gtacataagc tgatgaagag gtcatgggga accgtctctc gctgttgtgg cgggcaatgt
     3001 cggcggtgac ctggcggcct gcattgatct gaatcagacc gcgccggttc ggttcgagcc
     3061 tccctgtggg ctacaaacga cgcgtgatgt ccagaatcag gaagcctgct accgtcgggc
     3121 cgtcaaccgc cgccgagttc ggcatggttg cgctggaagg gtttgatcga ttgtccgaac
     3181 aaaacagcag cggcccgacg cctatgccaa ccgatcaggc acgcgcatgg ctctctgcca
     3241 tcgccgagtt caccgacgac gcgatcatcg gcaagaacct caatggcatc gtcatttcct
     3301 ggaacaaagc ggccgccgcg atgttcggcc atgcggctga cgagatcgtc ggccagccga
     3361 tcaccgcgat cattccaccg gagcggctgg acgaagaagt cctgatcctc gaacgggtgc
     3421 gccgcggcga acggctggtg cacttcgaga ccgagcggca gcgcaaggac ggcacgatca
     3481 ttccggtgac gctgaccatt tccccgatcc gcgacgactc gggcgcgatc atcggggtct
     3541 ccaagattgc tcgcgatctg agtgagcaaa cgcgcgcgca ccaggcactg cgacagcggg
     3601 aagcgctgct gagttcgatt ctcgacaccg tgccggacgc gctgatcgtg atcaacgaac
     3661 aggggcatat ccagtcgttc agtgccgccg ccgctcgcct gttcggttac gacgcaaccg
     3721 aggtattgga ccgtaatgtc agcatgctga tgccgtcgcc gtatcggcag gaacatgaca
     3781 gctacctgac gcgctacctc accaccggcg agcgccgcat catcggcatc ggacgggtcg
     3841 ttgtcggact acgaaaggac ggcacgacct tcccgatgga attggcggtc ggcgcagtca
     3901 gtctgcccgg cgagcggctg ttcaccggct tcatccgcga cctgacggaa cgccaggatc
     3961 gcgagcaccg cctgcatgag ttgcaatccg aactgatcca tgtgtcccgg ttgaacgatc
     4021 tgggtctgat ggtttccgcc ctggcgcatg aagtgaacca gccgctggcc gcgatggcca
     4081 attatatcaa cggcgcacga cggctgttcg ccgccggcaa ccaggcgggc ggccagcagg
     4141 cgatcgagcg ggtcgctgaa caggctgacc gcgcgcggca aatcattcgc cggctgcgcg
     4201 atctggtgaa gaagacggaa tcagaaaagc agcgcgaaag tgtgccggtc accatcgagg
     4261 aggcga
//
LOCUS       DATAVD010000442         3541 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2832186, whole genome shotgun sequence.
ACCESSION   DATAVD010000442 DATAVD010000000
VERSION     DATAVD010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3541
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2832186"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(495..2017)
                     /locus_tag="VHX39_08215"
                     /pseudo
     CDS             complement(495..2017)
                     /locus_tag="VHX39_08215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612229.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            2184..3221
                     /locus_tag="VHX39_08220"
     CDS             2184..3221
                     /locus_tag="VHX39_08220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_044551230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEX3991143.1"
                     /translation="MDQISRIGMDTSKHIFQLHGVNVAEAPVLRKKLRRKDMVAFFAK
                     LPPTVIAIEACGASHHCARLLQAFGHSVKLIAPQLVKPYVKRSKNDAADAEALCEAMS
                     RPTMRFVPVKTAEQQAALMLVGVRDRMIRNRTQLSNAVRGHAAEFGLTAAKGMAHLVP
                     LLERIEADESLPALARELFAVQAEEFAQLQARIGEIDARLTTWHKADECSQRLGKIPG
                     VGPISAVLLRMKTPEPELFKSGRQFAAWIGLTPKDHSTAGKVRLGVITRAGDEGLRSV
                     LVAGATAVIRHAQRSGKASPWLAGLLTRKSPKLAAVALANKTARIAWKMMMTGETYIA
                     KSVPAALAGTV"
BASE COUNT          626 a         1083 c         1162 g          670 t
ORIGIN      
        1 ctcgcaggtc acagaacgcg ggcaggcctc ttccttgaga cgatctcaga gaagaacccg
       61 catctcttcg cacattggcg gaaaggtact atcggtgcgt tcgcctgatg ggagccgtgt
      121 gaggcgagag tctcacgcac ggttctgcga gtggccggag gtgaaattcc tccggcctac
      181 cggtgagtgt caagcaagtt gtcgctcgga acttgtaacg atctcttctt ttatcactcc
      241 ttttggcgtg tcaacagttg ttgattgcct ggtccgccgg ttggcgatga gtgcgccacg
      301 gtgctcactt cggggaaggt ccggtgctcg ccgtcctcgc catgctcgcg cgcgggggcg
      361 cgctgcgcgt ggctctgggc ggctccgctc ctcccaaccc cttcgttgcg cgccgtgggc
      421 cgggcattgc caggtcggga caggaaagca ggtgcgccga tcgaaccgga aagcgggttc
      481 tgggacaaag ccgcctgcat gacggcgtcg cgctccggat tgagcgtaac cgatgtcact
      541 ggcgtccagt cgcgggtctg gccgctccag cgccgtgggt tggcctggcg tgcctgttgg
      601 tagagttggt gccgggctgc gagcagggaa cgatcttctc cggcgtggcg ctgcgccggc
      661 gtcacgtatc cgataccgct gtggcggtgt tccgtgttgt accaacgaac gaagcgcgtg
      721 gtccattgcc gtgccgcatc gagtgcggcg aagcctctga ccggaaactc aggccggtat
      781 ttggcggtgc ggaacaacgc ttcagcataa gcattgtcat cgctgacgcg cggccgcgag
      841 taagacggtt cgatgccgag ccaatgcagc atggccagga ccgtggtggc cttcagtgtg
      901 gcaccgttgt caccatgcag gaccggcttc accggcatgg catgcacagc ttcggcgagc
      961 gcagttcgcc gcgccagatg cacggcatgg tccgcgctgt cggtatcatg cacctcgaag
     1021 ccgacgatct tgcgactgta gaggtcgagg atcaggtaca gatagaacca tcggccttga
     1081 acgttcgcag gaaggaatgt cacgtcccag caccagacgt cacccggtcg ggtggcgatg
     1141 tgcgtggttg gcggacgcga tcgacggggt ggccgggcac gaccccgacg gttcatctgg
     1201 ccatgcgcgc gcagcacccg atggaaactg gactcgctgg cgatatagac accttcgtcc
     1261 gccagcaccg gaacgatccg ggcgggcggg gtttcggcga agcgcgcctc gttcgccacc
     1321 tcgacgatgc gcgcgcgctc ggtttccgtc agagcgtgtg acagggcggg acggatcgcg
     1381 tccggacgcc ggtcaccacg tgtcaggccg tcgccgttgc tccaacgttg gatcgtgcgc
     1441 ggggtgatcc ccgccagagc acacgcgggt gcctggcggg agccgtcggt gcgggcctgc
     1501 atgatcagat gaaccagggt ctggcgatct tccgggcggg tcatgcgtcc tcgccgtcgt
     1561 ggaagatcgc cgagagtttt tttgacagca cgagcaaggc ggccgtttcg gccaacgcct
     1621 tgtccttgcg gtgcagatcc cgctccagtt ccctgatccg gcgacgatct tgcttcgtgg
     1681 ccgcactctc ccccgcctca cggggttcgc cgagaccgcc gatcgcgtcg cgcttccagg
     1741 cgtccagcgc ggttggaaac acgccgtgtt cgcggcacca ggcactgcgc gccgtctcgt
     1801 ccagacccgc cgtggcgatt accgcttcga gccgcgccgc cggactccag cgccgaggtt
     1861 ggtcatccga ggcctgggcg agcatttcag cccgccagcg ttcaagtgtc gcgacgctga
     1921 tcccaacctt gttcgagacc tccgccaccg gtgaactttc cggcggcagc agacgcgcga
     1981 ccacacgttc tttgaactgc tgaccgtatc gagccatgtc cgtcttccgt cgcccccaga
     2041 gggtcaaatc ctatccgggc ggcaacttct ctgacacagg gggctactca ccatagcctg
     2101 cactgttggt gtggacggcc cccggcggca tcgatgtgcc agaatgaggt cgtgttagtg
     2161 atctcagaca aaggagaccg tccgtggacc agattagccg aattggaatg gatacgtcga
     2221 agcacatttt ccagcttcac ggggttaacg tggccgaagc gccggttctg cggaaaaagc
     2281 tacggcgcaa ggacatggtg gcgttcttcg cgaagctccc tccgacggtg atcgcaattg
     2341 aagcctgtgg tgcgagccat cattgcgcgc ggctgctgca ggcgtttggg cattcggtga
     2401 agctgatcgc gcctcaactg gtaaagccat atgtaaagcg aagcaaaaac gacgcggccg
     2461 acgccgaagc gctttgtgag gcgatgagcc ggccgacaat gcgtttcgtg ccggttaaga
     2521 cagctgaaca gcaagcggct ttgatgcttg tcggcgtccg tgaccggatg atccgcaacc
     2581 ggacgcaatt gtccaacgcc gttcgcggcc acgcggcgga atttggcctt accgcggcca
     2641 aggggatggc tcacctggtt ccgctactcg aacgtatcga ggccgatgag agtctgcccg
     2701 cgttggctcg ggagttgttt gccgttcagg ccgaggagtt tgcacaactg caggcgcgca
     2761 ttggcgagat cgatgccagg ctaacgacct ggcataaggc cgatgaatgc agccaacgtc
     2821 tcggcaagat ccctggcgtc gggccgatca gcgctgtgct gcttcggatg aagaccccgg
     2881 agcctgagct ctttaaatct gggcggcagt tcgcggcctg gatcggcctg acgccgaagg
     2941 atcattcaac cgccggcaaa gtcaggctcg gcgttataac acgagccgga gacgagggat
     3001 tgcgcagcgt gttggtggct ggggcgaccg cagtgatccg acatgctcag cgcagcggaa
     3061 aggcgtcgcc gtggcttgcc ggacttctca cgcgcaaatc gccgaagttg gccgccgtgg
     3121 cactggcgaa caagacggca cgcatcgcct ggaagatgat gatgacaggg gagacttata
     3181 tcgcgaaatc ggtacccgcc gccctggcgg gcacagtgta gagatcagcc cgcccggctg
     3241 acatgaagtt gttgaaacgt cccgtgtcgc cccccctggc ccgataccgg caaccacagt
     3301 tccgcccgcc ctctgctcta tgccttatgg gtcggcttcc actgtgaacc gttatgtaac
     3361 gccatccggg ccttccatgc ggccggtgcg accttcaacc attcgggagt ggcacgaaac
     3421 gcctcgtgct gaagatgagg cgacagcggc gaccgacgtg acgacatccg tggccgccgc
     3481 cctggcgggc atggtccaga gatcagccag acacggggag caatgtaacc gtgctgagct
     3541 g
//
LOCUS       DATAVD010000443         4083 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_413066, whole genome shotgun sequence.
ACCESSION   DATAVD010000443 DATAVD010000000
VERSION     DATAVD010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4083
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413066"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1482)
                     /locus_tag="VHX39_08225"
     CDS             complement(<1..1482)
                     /locus_tag="VHX39_08225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M81 family metallopeptidase"
                     /protein_id="HEX3991144.1"
                     /translation="MRLLIAKVSHETNTFSPVPTPVARFCPDGETLLTGQAAIDFYRG
                     TTSCIGRYLAIADELGADVVLPVAAAAPPSGPVDDDAFDLFCRLITDALQQQRFDAIM
                     LDLHGAMVTRHYEDAEGELLRRVRAVAPDTKLSVSLDMHANIFDGMVLRADVIAGYRT
                     YPHVDHLPTAERAGRTLVRALRGEVHPVTVWANAPMLPHVMAQGSYRSPNRDLQAMAE
                     AMEQSGEALVASVFTGFPHADVSQAGLSAVVVTDGDPAAAQRLVTRLLDAAWEARQSF
                     TFQTEPLADSVARAKVLDGPVVMLDHCDNSSSGGTMDTTAVLAEIMRQGLEDVVFFGI
                     YDPDAVQAAMQAGVGATVELRLGGRMQMPSIPGNNEPLLVRGRVRILSAGYFVSESPM
                     RAGVAVTMGPMAVLDTGNVEIVLISRHAEPSDLGLFKVVGIDPAKKRYVAIKSRVHWR
                     ADLGSLAKHVVECNGLGVCTSDYGILKFDHVRRPIYPLDLINER"
     gene            complement(1485..2624)
                     /locus_tag="VHX39_08230"
     CDS             complement(1485..2624)
                     /locus_tag="VHX39_08230"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEX3991145.1"
                     /translation="MPLILSSETQMVRDTAQEFFRERAPITALRKLRDTNDPDGFSRS
                     LWREMAELGWTGFLVPEDFGGTEFGVLGLAQVMEAAGRTLAASALVSTALVGASLLAM
                     AGSAAQKSDHLPPLVSGERLFALALEEGSRHQPYRIATQADRVGEGYRLSGQKVFVLD
                     GHVADVLIVAARTSGGRDEREGVTLFLVPGDAPGVTRLRTIMIDSRNAAQVRLDNVTV
                     GPDAVLGRVGGGADVLDRVLDRARACLAAEMLGSAAEAFERTVQYLKDRKQFGVAIGS
                     FQALKHRAAQMFCEVEVTRSAVIAACSALDENANDASALAALAKGKANDTLDLCGNEG
                     VQMHGGIGMTDEHEIGFFMKRARVARATFGDTAFCRDRYATLLGY"
     gene            complement(2850..4040)
                     /locus_tag="VHX39_08235"
     CDS             complement(2850..4040)
                     /locus_tag="VHX39_08235"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3991146.1"
                     /translation="MSDLNAFRAETRAWLEANCPPVMRTYMPENEQVAGGKRARYVRP
                     EQKLWLDRMATKGWTAPTWPTKYGGGGLSGDEALILEEEMQDLGCRAPLRGMGLSMLG
                     PVLLEYGTEEQRQQHIPPIVRGEIRWCQGYSEPGSGSDLASLSTRAVLQGEHFLVNGH
                     KIWTSNAHVSDWIFCLVRTDPTVKKHDGISFLLIDMADPGVRPRPIRLISGKSVFCET
                     FFENVQVPAGHLVGELNKGWTIAKRLLEHERKGIGGIGARAAAKFEVTPEGLAIRYAG
                     DDNGRIADPDLRSRIAAYSMDAHAFQLTRRRAAEEADAGAPPGPMSAMFKYYATELNK
                     TRYEMLIAAEGFNALGWEGEPFTDDEIRLTREWLRSKANSIEGGTSEIQLNIIAKRVL
                     ALPD"
BASE COUNT          810 a         1366 c         1150 g          757 t
ORIGIN      
        1 tcgttcgttg atcaaatcca acggatagat cggccgccgc acatggtcga acttcagaat
       61 cccgtaatcc gaggtgcaaa cgccaagccc gttgcattcc accacatgtt tcgccagcga
      121 cccaaggtca gctcgccagt gcacccggct tttgatcgca acgtaacgct tcttcgccgg
      181 atcgattccc accaccttga acaaccccag atcactcggt tcagcgtggc ggctgatcag
      241 gacgatctcc acgttgccgg tgtccaggac tgccatcgga cccatcgtga cggccacacc
      301 cgcccgcatc gggctttcgc tgacgaaata ccctgccgac aagatgcgca cccgtcctcg
      361 caccagcaac ggttcgttgt tgcccggaat ggacggcatt tgcatacgac caccgaggcg
      421 cagttcgacg gtggcaccga cgcccgcttg catcgccgcc tgtactgcgt ccgggtcata
      481 aatgccgaag aacacgacgt cctccagccc ttgccgcatg atctccgcca gcaccgcggt
      541 cgtatccatg gtgccgcccg aggacgagtt gtcgcaatga tccagcatca ccacaggccc
      601 atccagtact ttcgccctgg caacggaatc cgcaagcggt tcagtctgaa atgtaaatga
      661 ctgtcgtgct tcccatgccg catccagcaa ccgggtgacg aggcgttgtg ctgcggctgg
      721 atcgccatcg gtcaccacca ccgcgctcaa tcccgcctgc gaaacgtcgg catgcgggaa
      781 gccagtgaac acactggcaa cgagggcctc accgctttgt tccatcgcct cggccatcgc
      841 ctgcaggtcc ctgttgggcg aacgatagct gccctgggcc atgacatgcg gcagcatcgg
      901 cgcgttagcc cagacggtga cggggtggac ttcaccgcga agcgcgcgga ccagggtgcg
      961 accggcgcgt tccgccgtgg gcagatgatc gacgtgggga taggtgcgat agccggcaat
     1021 cacgtcggct cgcaacacca taccgtcgaa gatgttggcg tgcatatcaa gcgaaaccga
     1081 caatttcgta tccggtgcaa ccgcgcgcac ccggcgcagc agttcgcctt cagcatcttc
     1141 gtagtgacgc gtgaccatcg cgccatgcag atcgagcatg atggcgtcga accgctgttg
     1201 ctgcagcgca tcggtaatca accgacaaaa caggtcgaac gcgtcatcgt ccacaggacc
     1261 gcttggcgga gcagcggctg cgacgggcag cacgacgtcg gcgccaagtt cgtcggcgat
     1321 ggcgagatac cggccgatac aactggtggt gcctcgatag aaatcgatcg ccgcctgccc
     1381 ggtcagcagc gtctcgccat cggggcaaaa ccgcgcaacc ggcgttggca cgggcgagaa
     1441 cgtattggtt tcatgagaaa ccttggcgat cagcaggcgc atcttcagta tcccaacaac
     1501 gtcgcgtaac ggtcgcggca gaacgcggta tcgccaaagg tggcacgagc gactcgggcg
     1561 cgtttcatga aaaagccaat ctcgtgctca tcggtcatgc ctatgccgcc atgcatttgc
     1621 acgccctcat tgccgcacag gtccaacgtg tcgttggcct tgcccttcgc cagggcagca
     1681 agagccgatg catcgttggc attctcatcc agcgccgaac aggcggctat cacggcagat
     1741 cgggtcacct ccacttcgca gaacatttgc gctgcccggt gcttcagcgc ctggaacgaa
     1801 ccgatcgcaa caccaaactg cttgcgatcc ttgaggtatt gcacagtgcg ttcgaacgcc
     1861 tcggccgccg agcccagcat ttccgcggcg aggcaggcgc gggcgcgatc cagcacgcgg
     1921 tcgagcacat cggcaccacc gccgaccctg cccagtactg catccgggcc gaccgttacg
     1981 ttgtccaacc ggacctgggc cgcattgcgg ctgtcgatca tgatcgtgcg taggcgcgtg
     2041 accccgggtg catcgccggg caccaggaac aacgtgaccc cttcccgctc gtctcgccca
     2101 ccggaggtcc gcgctgcgac aatcaacacg tctgcgacat ggccatcgag gacaaagacc
     2161 ttttgcccgc tgagccgata cccctcgccc acccgatccg cctgcgttgc gatacggtac
     2221 ggctgatgcc gagacccttc ctccagcgcg agagcaaaca gccgttcgcc ggaaaccaac
     2281 ggcggcaaat ggtcagactt ttgtgccgcc gatccggcca ttgccagcag cgaggccccg
     2341 accagcgccg tcgacaccag tgccgaggct gccagcgtcc tgcctgccgc ctccattacc
     2401 tgggccaggc ccaacacgcc gaattcggta ccaccgaagt cctccggcac cagaaatccg
     2461 gtccagccga gttctgccat ttcccgccac aggctgcgcg agaacccgtc cggatcgttg
     2521 gtgtcacgca atttccgcaa cgcggtgatg ggagcgcgtt cgcgaaagaa ttcctgcgcc
     2581 gtatcgcgca ccatttgggt ttcggaggaa aggatcagag gcatgatggt gaagttccct
     2641 tacaaaccca gtaccaggtt gccatcgacc cgatgccgca tctgaggata tctgtgattc
     2701 cctttcctat caggcgccaa catccgacgg ctgcagggta ttgatcgcct taagtaagaa
     2761 aaacacagat acacacggat acccacagat tcacacagat gatttcgtaa ccaataacgg
     2821 cagcccgcgg tgaacacaat cacaacaact caatccggca gcgccaacac gcgttttgca
     2881 atgatgttaa gctggatctc cgaagtcccg ccctcgatcg aattggcctt cgaacgcaac
     2941 cactcgcgcg tcagtcggat ttcatcgtcg gtaaacggct cgccctccca gccaagcgcg
     3001 ttgaaacctt cagcggcgat cagcatctca tagcgcgtct tgttcaattc ggtcgcgtag
     3061 tatttgaaca tggccgacat cggacccggg ggcgctccag catcggcttc ctcggctgcc
     3121 cgccggcggg tcagctgaaa agcgtgagcg tccatcgaat aagctgcgat gcggctgcgc
     3181 aggtcgggat cggcgatgcg gccgttgtcg tcgccggcgt atcgtatggc caacccctca
     3241 ggggtcacct cgaacttcgc tgcagcccgg gcaccaatgc cgccgatgcc cttacgctcg
     3301 tgctccaaca gacgtttcgc gatcgtccag cccttgttca gttcgccgac caaatggccg
     3361 gctggcacct gaacattttc gaagaacgtt tcgcaaaaca ccgacttgcc gctgatcagc
     3421 cgaattggcc gcggccgcac gccgggatcg gccatgtcga tcagcagaaa actgatgccg
     3481 tcatgtttct ttaccgtcgg atcggtacgc acgaggcaaa agatccagtc cgacacatgc
     3541 gcgttcgacg tccagatctt atgcccattg accaggaagt gctcaccctg caacaccgcc
     3601 cgggtcgaca ggctggcaag atccgatcct gaccccggtt ccgaatagcc ctggcaccag
     3661 cggatttcgc cccgcacaat cggcgggatg tgttgctgtc gttgctcctc cgtgccgtat
     3721 tccagcagca ccgggcccag catcgacagt cccatgccgc gtaacggcgc ccggcagccg
     3781 aggtcctgca tttcctcttc caggatcagc gcttcgtcac ccgacaatcc gcctccgccg
     3841 tatttcgttg gccaggtcgg cgcggtccag cccttcgtcg ccatgcggtc gagccagagc
     3901 ttttgttccg gccgcacgta acgcgcgcgc ttgccgcccg cgacctgctc gttctccggc
     3961 atgtaggtgc gcatgacggg gggacagttc gcctccagcc aggcgcgggt ctcggcgcgg
     4021 aaggcgttca ggtcggacat tggcgttcct cgcgttaggc ggtgttgagg tgaccatcat
     4081 cct
//
LOCUS       DATAVD010000444         2715 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_599388, whole genome shotgun sequence.
ACCESSION   DATAVD010000444 DATAVD010000000
VERSION     DATAVD010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2715
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_599388"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(175..>2715)
                     /locus_tag="VHX39_08240"
     CDS             complement(175..>2715)
                     /locus_tag="VHX39_08240"
                     /inference="COORDINATES: protein motif:HMM:TIGR01733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid adenylation domain-containing
                     protein"
                     /protein_id="HEX3991147.1"
                     /translation="LDPQAPALRHAWITEDCAACLLITGETTQVSFTPAAPVLRLAAH
                     GVDQTAGTATNPERWGFGGRVAYVMYTSGSTGTPKGVQVPHRAVTRLVINNAYAEIGA
                     GDRVAFAANPSFDASTFEVWAPLLNGGTVVVIRHETVLNPQAFVRTLEKERINVLWLT
                     VGLFNQLAVELEPVLAQLKILITGGDVLDPRLIARVLSKPFKRPKQLINGYGPTETTT
                     FATTYRIESLRDETPSIPIGRPIANTRIYLLDPQGEPVPLGAAGEIYIGGAGVAAGYL
                     NRPELTAERFLVDPFAGDPDARMYRTGDLARYLADGNLVFLGRNDNQVKIRGFRIELG
                     EIEGRLAEHPAVREAVVLALQQESGKRLVAYVVADSDDQLARALRAHLAARVPEYMVP
                     AAFVRLDAFPLTANGKLDRRALPLPDDEAYARAAYEAPQGETETVLAAIWTELLGVER
                     ISRTDNFFHLGGHSFLALRVISDINKKLKLHLTAPTFFLYPTIAGLTKELEHSHHAQT
                     QSQVLTLRAGHTGLPIYLMGARPEEFRLGQLIGGDRRIFTVDIPFQTAWLSAFARSDI
                     KALPTIEQLGALYGETVAAHAGASPCVVAGYSLGGKIAFEAARVLQDAGGNVAFVLLL
                     DARAFTWSSYTMGPALESFARIWHGATRKADDIFSLHRLSASLRESWTVIRWLLSRVP
                     DSVRYRFNAIKTRLDKLTNRPAAAASTLPSGYFDEGGRPIDTLLINRLALVIGRRWHP
                     RALDAAGVLIRADNSEDMLPGNDPTNGWKGLFTGGLEILQTAGDHHSMVTEENAASLA
                     GQMNLILGRYEAARNEGAGSPGHKMDHGDSSGQQKLGQAPSQPERTVV"
BASE COUNT          539 a          852 c          807 g          517 t
ORIGIN      
        1 ccttgcatct gcgcgccatc gcgcagggtt gtgtcataca gcacgatgcg acgatcctgc
       61 agcgcggtaa cgaggccacg ctcggcgccc agaagggccg cagaagcagc caacgagacc
      121 gtcatggaac agccgtcatc gcagaccggc ctattatgtt ccatgcccga acgctcaaac
      181 aacggtgcgc tcgggttgtg agggcgcctg acctaacttc tgttggccgc tgctatcccc
      241 atgatccatt ttgtgaccgg gcgagcccgc tccctcgttt cgggccgctt catagcggcc
      301 gaggattaaa ttcatctgcc ccgccaacga agcagcattt tcctccgtca ccatcgagtg
      361 gtggtcgccc gcggtttgga gaatctcaag cccacccgtg aaaagacctt tccatccgtt
      421 ggtggggtcg ttgcctggca gcatgtcctc cgaattatca gcgcgaatga gcacacctgc
      481 ggcatccaat gcgcgcgggt gccatcgtct tccgatgacg agagccagcc gattgatgag
      541 cagcgtgtcg atcggcctgc ccccctcatc aaaatagccc gacggcagag tcgacgcggc
      601 agcagcgggg cgattcgtca gtttgtccag gcgggtcttg atggcattga agcggtacct
      661 cacgctgtca ggtacccgtg aaagcagcca ccggatgacg gtccaggact ctctgagcga
      721 tgcgctcaac ctatgcaggg aaaaaatgtc gtcggccttc cgcgttgcgc cgtgccagat
      781 ccgcgcgaaa ctctccaatg ccggccccat cgtgtagctg ctccaggtga atgcccgcgc
      841 atcgaggaga agaacaaacg cgacgttgcc tcccgcatcc tgcagcacgc gcgcggcttc
      901 gaaggcgatc ttgccaccta aagaatatcc cgcaaccacg cagggcgacg ctccggcatg
      961 cgcagccacc gtttcgccgt agagcgcgcc caattgttcg atggtcggca gcgctttgat
     1021 gtcggaacgt gcaaacgcgg aaagccatgc ggtctggaac ggtatatcga ccgtgaaaat
     1081 gcgccggtct ccgccgatca attgtcctag ccgaaattcc tccggcctgg cacccatcaa
     1141 ataaatcggc aatccggtat gtcccgcccg caaggtcagg acctgtgatt gggtttgggc
     1201 gtgatggctg tgctcaagtt cttttgttag ccctgcgatc gtcgggtaca gaaaaaacgt
     1261 cggtgccgtt aaatgaagtt ttaacttctt gttgatatcg ctaatgacac gcagcgccag
     1321 gaacgagtgc ccccccagat ggaagaagtt atcggtacgg ctgatccgct ccacaccaag
     1381 tagttcggtc cagattgccg ccaacaccgt ctctgtctct ccctgcggcg cttcataggc
     1441 ggcgcgggca taggcctcat cgtcgggcaa gggcaaggcc cggcggtcca gcttgccgtt
     1501 ggcggtgagc ggaaacgcgt caagccgcac aaaagctgcc ggcaccatgt attcaggcac
     1561 gcgtgctgcc aaatgcgcac gcaaggcacg ggcaagctgg tcatcgctgt cggccaccac
     1621 ataggccacc agccgcttcc cactctcctg ctgcagcgcc agcaccaccg cctcacgcac
     1681 cgccggatgc tcggccaagc gcccctcgat ctcgccgagc tcaatgcgga acccacggat
     1741 tttaacctga ttgtcattgc gcccgaggaa caccagattg ccgtccgcca ggtagcgcgc
     1801 aagatcgccc gttcggtaca tgcgggcgtc cggatcaccg gcaaaggggt caaccaggaa
     1861 ccgttcggcg gtcagttccg gccggttcag gtagccggcg gcaacccctg ccccaccaat
     1921 atagatttcg ccggcggcgc cgagcggaac cggttcaccc tgcggatcga gcaggtagat
     1981 ccgcgtgttt gcaatcggtc ggccgatcgg aatgctcggg gtctcatctc gtaaagactc
     2041 gatcctgtag gtggtggcga acgtggtcgt ttccgttgga ccgtagccgt tgatcagctg
     2101 cttcggtctc ttgaaaggct tggacaacac ccgggcaatc aaccgcggat caaggacatc
     2161 tcccccggtt atcaggatct tgagttgcgc caagaccggt tccaactcca cggccagctg
     2221 attgaacaga ccgaccgtca gccataggac gttgatccgc tctttctcga gcgttctgac
     2281 gaaagcttgg gggttgagga cggtctcgtg gcgaatcacg acaaccgttc cgccattgag
     2341 caagggtgcc cacacttcga acgtgctggc atcgaaggag gggttggcgg cgaaagcgac
     2401 acgatcgccg gcgccgatct cggcataggc attgttgatg accagccggg tcacggcacg
     2461 gtgcggcacc tgcacacctt tgggcgtgcc ggtagagccg gacgtataca tcacataggc
     2521 gacgcggccg ccgaaacccc atcgttccgg gttggttgcg gtccctgcgg tctgatcgac
     2581 accatgggcc gccagacgca acaccggtgc tgccggggtg aaggagacct gtgttgtctc
     2641 gccggtgatc aacaggcagg ccgcgcaatc ttccgtgatc caggcgtggc gcaaggcggg
     2701 cgcttgcgga tccag
//
LOCUS       DATAVD010000445         2229 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_788225, whole genome shotgun sequence.
ACCESSION   DATAVD010000445 DATAVD010000000
VERSION     DATAVD010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_788225"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..814)
                     /locus_tag="VHX39_08245"
     CDS             complement(<1..814)
                     /locus_tag="VHX39_08245"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991148.1"
                     /translation="MNQRPAVAQQAEWATRRERGSVLLIRLMVWLTLRFGRSVSRVLL
                     VPVCGYFFLCAPRARRASRAWLTRALGRPASARDMWRHFWCFATCVLDRVLLLNDRMD
                     LFDIRLHGEAELASVRAEHGGAFLFGAHLGSFEVVRAAGRALGDTRISLVMYEDNARK
                     TNQVLDAINPALAIEIIGLGRPGSMLAVQERLASGHLVGVLADRSLANERQLSTPFLG
                     TPARFPVGPFRLAAILKRPVVFMVGVYRGGRRYDIYFEVLSHTDIGGDTDHAI"
     gene            complement(811..>2229)
                     /locus_tag="VHX39_08250"
     CDS             complement(811..>2229)
                     /locus_tag="VHX39_08250"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3991149.1"
                     /translation="PELLKQLAEDYPDLYCLTDGSSPDDLKAFSFPSNICDTGAAAAK
                     NPVIAAEQPACVLFTSGSTGRPRPHARSWGELVSSALAEGSRLNISELADATLLGTVP
                     HQHSYGLESLVMLALQHGLALQARRLFYAADIRAQIAATPQPRLLVTTPVHLRVLLAE
                     PETPPPVDLVLCATAPLAGDLARDAEARFALSLYEIYGCSEAGQIAARRTALTEEWRC
                     LDGITLRQDTAGTWASGPPIAVETLLPDVIELHDPERFLLHGRIADLVDVAGKRTSLA
                     YLNHHLNAIDGVQDGAFAIADTVEQAVVGRLAAFVVAPGQSADTILAELRRRIDVAFL
                     PRPLCLVPTLPRNALGKLPHDEIQRLIAEARKQSVVTQDAVVSGTATVHFPLEHPTAE
                     GHFPGNPIIPGAVLLREVLAAISGQSARPKEIVSAKFHRPVRPGDTMEIRWATTGTTV
                     RFECSTESAHPAVTGDLRLPRP"
BASE COUNT          445 a          730 c          691 g          363 t
ORIGIN      
        1 cgatcgcgtg atccgtatca ccgccaatat ccgtgtggct gagcacctcg aagtaaatgt
       61 cgtaccgccg cccgccacga tacaccccga ccatgaacac caccggccgc ttcagaattg
      121 cggccagccg aaacggccca accggaaacc gcgctggcgt gccgagaaat ggggtactca
      181 attgccgctc gttggccagg ctgcgatccg ccagcacgcc aacgagatgc ccggacgcca
      241 acctctcctg cacggcgagc attgaaccag gtcgccccag accgatgatt tcaatcgcca
      301 gtgcgggatt gatcgcatcc agtacctgat tggtcttacg cgcattgtcc tcgtacatca
      361 cgaggctgat ccgcgtatcg ccaagcgccc gtccggcggc tcgtacgacc tcgaaactgc
      421 cgagatgcgc gccgaacagg aaggctccgc cgtgctctgc ccgaacgctg gccagctccg
      481 cctcgccgtg caaacggatg tcgaacagat ccatccgatc attcagcaac agcacgcggt
      541 cgaggacaca ggtcgcaaaa caccagaaat gacgccacat atcgcgcgcc gatgccggac
      601 ggccaagcgc cctcgtcagc cacgcccgcg aggcccggcg agccctcggt gcgcacagaa
      661 aaaaatagcc acaaaccgga accaacagga cccgcgacac cgaacgtccg aaccgcaagg
      721 tcagccagac cattagccgg atcagcagaa ccgaaccgcg ttctcgccgc gtcgcccact
      781 cggcctgttg tgcgacggcg ggtcgctggt tcacggtcgc ggcaggcgca ggtcgccggt
      841 cacggccggg tgcgcagatt cggtcgagca ttcgaacctg accgtcgtgc ctgttgtcgc
      901 ccaccgtatt tccatcgtgt cccctgggcg gaccgggcgg tggaatttgg ccgagacgat
      961 ttctttgggc ctggcagatt gaccagatat tgcggcgagg acctcgcgca gcagcacggc
     1021 gccagggata atcggattgc cggggaaatg gccctccgcc gtggggtgct caagcgggaa
     1081 gtgaacggtt gccgtcccgc tcacgacggc gtcttgggtg acgaccgact gcttccgggc
     1141 ttcggcaatc agacgctgga tctcgtcatg cggcaatttg ccaagcgcgt tgcgcggcaa
     1201 cgttggcaca aggcaaagcg gccgtggcag gaatgcgaca tcgatgcggc gtcgtagctc
     1261 ggccaggatg gtatcggcgc tttgtcccgg agcgacaaca aaagcagcga gccggccgac
     1321 aaccgcctgt tccacggtat cggcaattgc aaacgcgccg tcctgcacgc cgtcgatcgc
     1381 attcagatga tggttgagat acgccagcga tgtccgtttc cctgcgacgt cgaccagatc
     1441 ggcgatcctg ccgtgcaaca agaaccgctc cggatcgtgc aactcgatca catccggcaa
     1501 caaagtttcc actgcaatcg gcgggcccga agcccaggtg ccggcggtgt cctggcgaag
     1561 ggtgataccg tcgaggcagc gccattcctc ggtcagcgcg gtgcgtcgtg cagcgatctg
     1621 gccggcttcg gaacaaccgt agatctcgta cagcgacaag gcgaaccgag cctccgcgtc
     1681 gcgcgcgagg tcgccggcca acggcgccgt ggcgcacagc acgagatcga ccggcggtgg
     1741 cgtctccggc tcggcgagca ggacccgcaa atgcaccggg gtcgtgacca gcagtctggg
     1801 ctgaggcgtg gcagcgatct gcgcccggat atcggcagcg tagaacagcc gcctggcctg
     1861 cagcgccaac ccgtgctgca acgcaagcat gaccaacgat tccagaccgt aactgtgttg
     1921 atgcggcacc gtcccgagca acgttgcatc agccagttcg gaaatgttga ggcggctgcc
     1981 ctcggccagc gcgctgctga ccagttcgcc ccagcttctt gcgtgcgggc gaggccgtcc
     2041 ggtcgagcct gaggtgaaca acacacacgc cggttgctcc gccgcaatga caggattttt
     2101 cgcggcagcg gccccggtgt cgcagatatt cgaggggaaa ctgaatgctt tgaggtcatc
     2161 gggagatgac ccgtcggtca ggcaatagag gtcagggtaa tcctctgcca gctgcttcag
     2221 cagttccgg
//
LOCUS       DATAVD010000446         7118 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1530334, whole genome shotgun sequence.
ACCESSION   DATAVD010000446 DATAVD010000000
VERSION     DATAVD010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7118
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1530334"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            215..1336
                     /locus_tag="VHX39_08255"
     CDS             215..1336
                     /locus_tag="VHX39_08255"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEX3991150.1"
                     /translation="MSGSIVPQANPGAAYRAHKQEIDAAISRALDSGWYILGQEGRAF
                     ETEFAAWLGAGTVVGCGNGTDAIALALRGLGIGAGSTVVTVSHTAVATVAAIESTGAV
                     PLLIDVEPDHYTMDPAELAQVLADPPAGLPPVRAVIPVHLYGQVADVEVIGTLCRRHG
                     MALIEDCAQAHGAKRSGRLAGTFGDAATFSFYPTKNLGALGDGGAVVAREPAVAARIA
                     TLRHYGWARHYISDEVGINSRLDELQAAVLRVKLGYLDAANARRRDIARAYDAVLGAR
                     APRRRRGSEHVYHQYVVRTPERDRMQATLRERGVGSGIHYPVPVHLQPAYANRVLLGP
                     SGCAVTERAAAEVLSLPLYPELTEDQVGQVCRAIDCLAA"
     gene            1810..3411
                     /locus_tag="VHX39_08260"
     CDS             1810..3411
                     /locus_tag="VHX39_08260"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3991151.1"
                     /translation="MNRFASVATRCAPLLVNNPDDPEASLLSGLAAGARGHHEHAARL
                     LHRAARDRGHAAHPFRDLAIILCRTGQPAQVEPQFEAFYRVAPDDASLLYAYAEFLYD
                     SGQSKAAIPFLVEAERLQPDDMPARNLLAMAYASLGLTEAAINQLRDATARDPSRAGI
                     WANLGLLLKDDGRFDEALDAYDIALGLTPDDAQIRVNRVVALLRAGRWTEAWPDYEWR
                     LMLAEHAARRPRLLPALSSLGDLAGRTILAVHEDGFGDTLHFARYLPLLAARGATVIA
                     AVPAQLTRIMRTVPGIAAVHCADDPPPFHHFYCPFFSLPRAFEATPERIPPSLPWLHA
                     DPTLAEQWNARLPSSAVRVGLVWAGQARPMLPGFTTLDGRRSIALAGLAQLASVTDVT
                     FISLQHGPEAVQAHTPPPGMTLFDPMGALTDFADTAAIIANLDLVVSVDTSVVHLAGG
                     MGKPVFLLDRYDHCWRWLSGRTDSPWYPNLRIFRQPRIGHWAPVLEEVTAALAEFARA
                     LRTGTARNPIGVDLLKIPETVERDT"
     gene            complement(3334..4434)
                     /locus_tag="VHX39_08265"
     CDS             complement(3334..4434)
                     /locus_tag="VHX39_08265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991152.1"
                     /translation="MIQGVTIIGDVIRPDGQGQPGGVDRPSVWLFDAIKRQIDLACGL
                     PIDVITANGNPAIRAWLDRLSPPESAHRYWAAAYEDLPRSMEADAILTNRLRHRFCIG
                     YELPPWLRKLLRAIEVPYIDIRLHPVRFLDDLLFAVRASEPATQTLLLAMAVPESEVV
                     ITAGLREAMCHMISAATVPSDTLLVVGQRPLDCSQIVSGVFYDALPHATEIHAICAGY
                     SAVLLKPHPLEPAHSLLEIAAGAPNVAGVVRDNTYRLMSLPQIAAVLTVNSSVAYEAP
                     YFSKRVHTLAPLPIRLGWRGMTDEPNIHASLDDQVLSVDFWRQVLAPHTPVSKPDGAR
                     LPPKANRLRIALDSFWNFQEIDTDRIPRRTGP"
     gene            5146..6993
                     /locus_tag="VHX39_08270"
     CDS             5146..6993
                     /locus_tag="VHX39_08270"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3991153.1"
                     /translation="MTGSSAGTNSFDTPPPGTFDAIFHALDACSQDLIGPMRPHLLAI
                     PINDDEGVVTGGFWGCTLFQWLHVQLLFIPETLRGRGVGSALMTAAETEARKRGCIGA
                     HVTAFSFQADGFYERLGYTRFGQLDDYPPGHNMRYLRKRFDASAATVEPINLGDARKL
                     QALNRARAFAVAGDDDAAKQAYVDVLRIDETDFAALNEIGALACASGHRAAARTAYAQ
                     AVQYHGDNPVGRVNLGNLLLEDGEVAAARVQFEAVLAVNPDFPEAHQAMARVLDELQD
                     DEAEQHRFKGYAGHTVVTKPYRGTGTAVPLLLLVSAHGGNIPTRHWIDDRRFGVSAIH
                     TEFHDPAQPLPPHALVVNAIGDPDRCGMALACAETLLTATTAPVINTPARVRATDRAG
                     NARRLAGIPGVVSPTIIAFPREAIASVDKLQFPLLLRTPGFHTGQNFRYVENRHALAP
                     TVADLPGAELLAIEYCDARGPDGMARKYRAMFIDGALYPWHLAIAADWKVHYFTATMA
                     AHATYRAEEQRFLDDMPGVLGSRAMAALGAIGETLGLDYAGVDFALTRNGSVLVFEAN
                     ATMVIGPPGPEAVWNYRRDAAANVLRATADMLSRRVCKHAASAVSAPGC"
BASE COUNT         1264 a         2240 c         2231 g         1383 t
ORIGIN      
        1 agaccgcgca accatcgata tcggcagtta ccacgccgat gacgcagcgt ttcgtagtgc
       61 gaccgggtgg cggccacaga catcgctgga agatggcatc cggcaaacga tcgattggta
      121 tcggccaagg ttggcggatt atctatgacg acgccgacat tctctgagac acccccgtgt
      181 cgcggacacg acacacacaa tctgagggcc gccgatgtcc ggtagtatcg ttccgcaagc
      241 aaatcccggt gccgcttacc gcgcccacaa gcaggagatc gacgccgcga tcagccgcgc
      301 acttgactcc ggctggtata tcctcggcca ggaggggcga gcattcgaaa cggaatttgc
      361 ggcctggctc ggcgccggca ccgtcgtcgg atgcggcaat ggcaccgatg caatcgctct
      421 tgccctgcgc ggccttggca tcggagccgg gagcacggtc gttactgtgt cgcatactgc
      481 tgtcgccacg gtcgcggcaa tcgagagcac cggtgccgtg cctctgctga tcgatgttga
      541 gccggatcat tacacgatgg atcccgctga actggcccag gtgctggctg accctccggc
      601 gggattgccg ccggttcgtg cggtgatccc ggtgcatctc tacggtcagg tggcggatgt
      661 cgaggttatc gggacactgt gccgacggca cggcatggcg ttgatcgagg attgcgccca
      721 ggcgcatggc gccaaacgca gcgggcgcct ggccggcacc ttcggcgatg ctgccacgtt
      781 cagcttctat cccaccaaga acctgggtgc cctgggcgac ggcggtgctg tggtggcgcg
      841 cgagccggcc gtcgcggctc gcatcgcaac attgcgccac tacggctggg cgcggcacta
      901 catcagcgat gaggtcggga taaacagccg gctcgacgaa ctgcaggcgg cggttttgcg
      961 ggtgaaactc ggctatctgg acgcggccaa cgcgcggcgg cgggacatcg cacgcgccta
     1021 tgacgccgtc ctcggtgccc gcgcgccgcg ccgccggcgg gggtcggagc acgtttacca
     1081 ccagtacgtc gttcgcacgc cggaacgcga tcggatgcag gcgacgcttc gggagagggg
     1141 ggttggatcg ggtatccact accctgtgcc ggtccacctg cagcccgcct atgccaatcg
     1201 ggttcttctc gggccgtccg gctgcgcggt aaccgagcgg gccgcggcgg aggtgctatc
     1261 gctgccgttg tatccggaat tgacggagga ccaggtggga caggtctgcc gtgcgatcga
     1321 ctgcctggcg gcctgacggc ggtcccgtcg gctgcggccg gccccgattt cgcagcagcg
     1381 ggaaaaccgt gtgtcaaagt gtaagtccat cgggatcacg gcgcattttc accattcctt
     1441 aactttgttg acggcatcct ggcctgcttg tttcagagtt tcgcctcgcc atacaccgcg
     1501 gggtcgaggt gctgttccat aggccgccga taaaaacggc cgccgcgcga cggacacggg
     1561 aaaatcccgc ctctcttgat tttctggcag accggccggg cgatcggccg gatggaactc
     1621 gcaatggcag atggaggcgc caattcctca gccgtccaca agcgttcacg tgcggacacg
     1681 gctgtaagtt tagccgcgac cccacccgct ggcgcgatcg gcggatgtgc ggcacggctc
     1741 aagacaaaat tgcggattgg cggctcacgc cgcgcaactg tactgagccg ggctgtccac
     1801 gatctggcga tgaaccggtt cgcatcggtc gccacccgtt gtgctccatt actggtcaac
     1861 aaccctgacg atccagaggc atcgctgcta agcggccttg ctgccggtgc ccgcggacac
     1921 catgagcacg ccgcccgttt gctgcatcgc gccgcgcgcg atcgtggtca cgcggctcat
     1981 ccatttcgtg atctcgcgat catcctctgt cgtactggcc agccagcgca ggtggaacca
     2041 cagttcgagg ctttctaccg tgttgcgccc gacgatgcgt cgctgctcta cgcctacgca
     2101 gaatttcttt acgacagcgg ccagagcaag gcagccattc cgttcctcgt cgaagcagag
     2161 cggctgcagc cggatgacat gccggcgcgc aaccttctgg cgatggcgta cgcctcactt
     2221 ggcctgaccg aggcagcgat caatcaactg cgcgacgcga cggcccgcga tccgtcccgt
     2281 gccggcatct gggctaatct cggcctgctg ctgaaggacg acggccggtt tgacgaagcg
     2341 ctcgacgctt acgacatcgc cttagggctg acgccggacg acgctcagat ccgggttaac
     2401 cgtgtcgtag ccctgttgcg cgcgggacgc tggacagagg cctggccgga ttatgagtgg
     2461 cgcctgatgc tggcggagca tgccgcccgc cggccacgcc tgctgcccgc actttccagc
     2521 ctgggcgatt tggccggacg cacgatcctt gcggtgcacg aagacggctt tggcgacacg
     2581 ctacactttg cgcgctacct gccattgctt gccgcacgcg gagccaccgt gattgccgcc
     2641 gtcccggcgc aactgacccg gatcatgcgt accgtccccg gcatcgcggc agttcattgc
     2701 gcggacgacc cgccgccgtt ccatcacttt tattgcccgt tcttcagcct gccacgcgcg
     2761 tttgaggcca cgcctgaacg tatcccccca tcgctgccct ggctgcacgc cgatccaact
     2821 ctggccgaac aatggaacgc gcggttgcca tcgagcgcgg tccgggttgg cttggtctgg
     2881 gctggtcagg caagaccaat gttgccgggg ttcaccaccc tcgacggccg ccgtagcatc
     2941 gcgttggctg gcctggccca gctcgcctcg gttaccgatg taacctttat tagcctgcaa
     3001 catggcccgg aggccgtgca ggctcacacc cctccgcccg ggatgacgct gttcgatcct
     3061 atgggggcgc tgacggattt cgccgatact gccgccatta ttgccaatct tgatttggtg
     3121 gtgagcgtcg atacttcggt ggtgcatctc gccggtggga tgggcaaacc ggtcttcctg
     3181 ctcgaccgct acgaccattg ctggcggtgg ttgagcggac gcaccgatag cccgtggtac
     3241 cccaacctgc gcatcttccg tcagccgaga atcggccact gggctcctgt gctggaggag
     3301 gtcacggctg ctctggcaga gtttgcccgc gcgctaagga ccggtacggc gcggaatccg
     3361 atcggtgtcg atctcctgaa aattccagaa actgtcgagc gcgatacgta ggcggttggc
     3421 tttcggcggc aaacgcgctc cgtccggctt gctgaccggt gtatgcggcg ccaggacctg
     3481 acgccagaaa tccaccgaaa gcacctggtc atcgagtgag gcatggatgt tcggctcatc
     3541 cgtcatcccc cgccagccga ggcgaatggg caacggcgcc aatgtgtgca cgcgcttgct
     3601 gaaatatggc gcctcatagg ccacgctgga attgaccgtt agcacggctg cgatctgcgg
     3661 cagcgacata agccggtagg tattatcccg caccacacct gccacgttcg gcgcgccggc
     3721 tgcaatctcc aacaggctgt gcgccggctc caacggatgc ggcttcaaca gaacggcgga
     3781 atagcccgcg caaatcgcat gaatttcggt ggcgtgcggc agcgcgtcgt aaaacacgcc
     3841 gctaacgatc tgactgcaat ccagcggacg ttgaccaacc acgagcagag tatcggacgg
     3901 aaccgttgcc gccgagatca tgtggcacat cgcttcccgc aggccggcgg tgataacgac
     3961 ctcggattcg ggcaccgcca tggccagcaa taaagtttgc gtggcgggct ccgatgcacg
     4021 gactgcaaac aaaagatcgt ccaggaaacg caccggatgc agtcgtatgt cgatatacgg
     4081 cacctcgatc gcacgtagca gtttgcgcaa ccagggcggc agttcgtaac cgatgcagaa
     4141 ccggtgccgc agtcggtttg tcaggattgc gtctgcctcc atggatctgg gcagatcttc
     4201 gtaagcagca gcccagtacc ggtgggcgga ttccgggggg ctcaacctat cgagccatgc
     4261 gcgaattgcc ggattcccat tggcagttat gacgtctatg ggtagtccgc aggcgagatc
     4321 gatctggcgt ttgatggcgt cgaatagcca gactgacggg cgatcgacgc ctccgggttg
     4381 gccttgcccg tcagggcgta ttacgtcgcc aatgatggtg acgccctgga tcaccagtga
     4441 tgctgcgggt tcattataaa attcggtctg cctattttca ccatggaatt tccttgcgaa
     4501 ctggttatgg ctgaaggctc tgccagttgt ttgaaggaac cgttaattta ttggttagga
     4561 gggtcgatca ttgaaataac tgctccctcg ccgccggatt tggctgctgc atggcatgtt
     4621 cggtcgggga tttgattgcg ggaacaagcg ggtgcagtcg accgccaatg atgtccacgc
     4681 tgtcgtttgt cgtaagctgt taacagttat tttacctttt cgcggtaaat cgggtttgct
     4741 ttcttccaag caggacacac caacatgagt atctctggta taacgggcgg tcagcccgtg
     4801 ccgcttccgc aagctgcacc caccccgcca ccgcccgctg cgacgggtac atcggcggcg
     4861 tccactccgg cccaacaaat cgcggcgggg caccatcatc accatccccc ggtgaatggt
     4921 actggaagcg agggagcaca tggtgggggc cagcctgccg cggcgacccg acctggaggc
     4981 acgggcgtca acacgctcgc ctagagccgt ttccatctga cgatacaggg tgaaatgctc
     5041 tggctccttg gctagccgca tgacagacgc gatgtcggca ttccgtactg ggctatgccc
     5101 tcacgctgag ggcatacgcc tgtgtcgcgg cgcgggtggc gcgttttgac cggcagttcc
     5161 gccgggacga attcgttcga cacgcctccg cctggcacct tcgacgcgat tttccatgcc
     5221 ctcgatgcat gctcccagga tctgattgga cctatgcggc cgcacttgct ggccatcccg
     5281 atcaacgacg atgagggcgt cgtaacaggc gggttctggg gctgcacctt gttccagtgg
     5341 ctgcatgtgc agttgctgtt catacctgaa acgttgcgcg gcaggggcgt cggctccgct
     5401 ctgatgacgg cggccgaaac cgaggcccgc aaacgaggct gcatcggcgc gcatgtcacg
     5461 gcattcagct ttcaggctga cgggttctac gaaaggcttg gctatacacg gtttgggcaa
     5521 ctggacgatt acccgcccgg tcacaacatg cgttacctgc gcaagcgctt cgatgcatcg
     5581 gcagcaacag tcgaaccgat caatctgggt gatgccagaa agttgcaggc gctcaatcgc
     5641 gcgcgcgcat ttgcggtcgc cggcgacgat gatgcggcga aacaagccta tgtcgacgtg
     5701 ctccgcatcg atgagaccga ctttgccgcc ttgaacgaga tcggcgcact cgcgtgtgcc
     5761 agtggccatc gtgctgcagc gcggaccgct tatgcccagg cggttcagta tcatggcgac
     5821 aatccggttg ggcgggtcaa tctcggcaac cttcttttgg aagatggtga ggttgccgcc
     5881 gcgcgcgtcc agtttgaggc tgtgcttgcc gtcaatcccg atttccccga agcccatcag
     5941 gccatggcgc gggtgctgga tgaactccag gacgatgagg cggaacagca ccggttcaag
     6001 ggctatgccg gacatacggt tgtcaccaaa ccgtatcgtg ggaccggtac agcagtgccg
     6061 ctgcttctgc tggtctccgc ccatggtggc aatattccca cccgtcactg gatcgacgac
     6121 cggcggttcg gcgtatcggc gatccatacc gagtttcacg atccggcgca gccactgccg
     6181 ccgcacgcgt tggtcgtcaa tgcaatcggc gatcccgatc gttgcggcat ggcattggca
     6241 tgcgcggaga cattgctcac cgccaccacc gcgcccgtca tcaatacacc cgcccgcgtg
     6301 cgagcgactg accgggccgg caacgcccgg cgccttgccg gcattcccgg cgtcgtctcg
     6361 ccaacgatca ttgcgttccc tcgcgaggcg attgcctctg tcgataaatt gcagttcccg
     6421 ttgctgctac gcacgccagg cttccacacc gggcagaatt tccgctacgt tgagaaccgt
     6481 cacgcgctgg cgccaacggt cgcggaccta ccgggcgccg agttgctcgc aatcgaatac
     6541 tgcgatgcga ggggtcccga cggcatggcg cgcaaatatc gcgcgatgtt catcgacggg
     6601 gcactctacc catggcacct ggcgattgcg gccgattgga aggtgcacta cttcaccgcc
     6661 acaatggccg cacatgcgac ctatcgcgcg gaggaacagc ggtttctcga tgatatgccg
     6721 ggggtactgg gttcccgggc gatggcagcg cttggcgcca tcggggagac gctggggctc
     6781 gattacgctg gcgtcgattt cgccctgaca cgcaacgggt ccgtattggt cttcgaggcc
     6841 aacgccacca tggtgatcgg ccctcctggg ccggaggcgg tctggaatta tcgccgcgac
     6901 gctgcagcca atgtgctcag ggcaactgcg gatatgctgt cgcggcgcgt gtgcaaacat
     6961 gcagcgtccg cggtcagcgc accgggttgc tgactgtgat atccgccacc gagacctggc
     7021 gaggcatcag cgcaaggtcc cactcaatgg acgacggtcg cactgccacg cccaacacgg
     7081 cagcgggctg ggtcgaggcc atggcgatcg cctgctct
//
LOCUS       DATAVD010000447         7043 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_228000, whole genome shotgun sequence.
ACCESSION   DATAVD010000447 DATAVD010000000
VERSION     DATAVD010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7043
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_228000"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            51..1367
                     /locus_tag="VHX39_08275"
     CDS             51..1367
                     /locus_tag="VHX39_08275"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439016.1"
                     /note="This protein belongs to a clade of FMN-dependent
                     monooxygenases, within a broader family of
                     flavin-dependent oxidoreductases, the luciferase-like
                     monooxygenase (LMM) family, some of whose members use
                     coenzyme F420 rather than FMN; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NtaA/DmoA family FMN-dependent monooxygenase"
                     /protein_id="HEX3991154.1"
                     /translation="MSRKPFHLAWFLQGSSVQAWGEPWTGHIGTTWQQPDLFLDMARC
                     LERACFDYILLEDSSYVGESFGGSTELYLKHGIAVPRQDPSVVAALMTQVTSRIGIVP
                     TFGTFAYPPYLLARLVATLDQVSAGRIGWNMVTGSSDFAAMNFGLSGMPEHDLRYDMA
                     DEYIDVVQRLWASWEPGAIVADRASGVLVDPTKVHAVNYEGNFFKTRGPLNSGPAPQG
                     RPVIAQAGGSPRGRQFAARYADTIVAHPKGIDGMKAYRDDVRTRMVAQGRNPDDCKVL
                     FMVAPIIGETDADAQERKRIREARAAAQIPQRLAFLGKLMNIDFGGMDLDRPLADDLA
                     TNGHQQTLDQFKKMAAGRTLRQAMSGHNVTALSVELIGTPDTVAAKMGEVMAEVGGDG
                     FLFSMQNVSRRLLAEIEDGLIPALQDRGLVRSAYGHQQFRDNLLEY"
     gene            1443..1910
                     /locus_tag="VHX39_08280"
     CDS             1443..1910
                     /locus_tag="VHX39_08280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006557119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX3991155.1"
                     /translation="MAGRIEATLAELGITLPRPMAPIANYVPYVVTGNLVVVSGQVPA
                     VDGKVAVTGKVSWGVSLDQAKEAARLCFINVLVHLKAACGGDLDRVKRVVRLGGFVAA
                     PSEFTQHALVMNGASDLAVAIFGEAGRHARSTIGVPSLPADAAVEVEGLFEID"
     gene            1921..3078
                     /locus_tag="VHX39_08285"
     CDS             1921..3078
                     /locus_tag="VHX39_08285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3991156.1"
                     /translation="MPDGSATLTLTLHARIAEIDAADWDACAGDGNPFVSHEFLSAME
                     DSGSANSRTGWLPQHAVLRRESGDIVGVVPMYAKSHSYGEYVFDHGWANALERVGENY
                     YPKLQAAVPFSPVPGPRLLRRPDAGVPVSAMASALEQACQSHDLSSVHVTFCTEDEWR
                     GLGDAGWLQRIGMQFHWENEGYKSFDDFLGALSSRKRKVLRRERRDANAAGLTFHALS
                     GADITERHWDAFYAFYQSTVDRKWGSAYLTRRFFSLLGERLGDKVVLMYAENAGKPVA
                     GALNLAGDQALYGRNWGCRGDWPFLHFELCYYRAIDWAIEHGLRRVEAGAQGRHKIQR
                     GYMPKPTYSAHWITHAGLRRAVANFLVDERAGIEAEMAALAEDSPFRKGDD"
     gene            complement(3101..4330)
                     /locus_tag="VHX39_08290"
     CDS             complement(3101..4330)
                     /locus_tag="VHX39_08290"
                     /inference="COORDINATES: protein motif:HMM:NF021603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2336 domain-containing protein"
                     /protein_id="HEX3991157.1"
                     /translation="MKVDEATRVRQSASITTSPEVLRALANDPSVTVRVSLALNPALP
                     EHVSAMLAEDTDARVRTILSRKLSTLTPGLADDARQQMQRDAVANLTAMVADAALRVR
                     MNIAEAVKDLADGPRDIVLRLAHDPAVMVCEPVIRFSPLLTQEDLVTLIAAGPPPSTI
                     MAVANRPKINAAVSDAIIGTDDTAAIRALLANPTAQIREATLDALAAQSEVQTDWQAP
                     LVNRPYLPPRAQRMLAEIVTGHLLETLAARNDLDPKVAQAVRTAVELAHPNSPSDPPP
                     DEDSRLSRAHALALDRAGKLDDEAILEALRRNENQQATAMLAVKADVRPAVVERACAL
                     RSAKGIVSLTWKAGLTVQTAAVLQVALAHLTPDLVLRPNRDGLFPLSEDEMRWQLAFL
                     DVPDRASRAWRPRPLGE"
     gene            complement(4330..5733)
                     /locus_tag="VHX39_08295"
     CDS             complement(4330..5733)
                     /locus_tag="VHX39_08295"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX3991158.1"
                     /translation="MTELLLDPNVAASPPAPPHDSIRDALMESRQRWQNLVGLAADLA
                     FETDAEGRFAFMMPDTVLGWPASALIGQPADVLVGDDGTGPTFNPFRPVVEMRRHRAW
                     LRCADGRLALITVSATPLHNAAGQVIGARGIGVDMTDSDAQTSQIAGRLRRGQVLHHI
                     ISRVGRETDADSMIDTALWALVHALGAEGAAVIGAVSRNAPIEVLHECGPGASEVLET
                     ACRLVARPTSEPSHGMNPDGRVVLVVGCQTRFSAHAGLAIWRVADARPWDQEDTMLAG
                     SAVFIVRMILEYEALQQDIVQQARTDPLTGLLNRRAFIAEMHRDITRLDRGAEAGTLM
                     FVDVDSFKSVNDRLGHGAGDQVLIGLADMLRKLVRPSDLITRLGGDEFAVWLSGADHM
                     TAAERADHLCRTAPLALQSMLPETFPKLGVSVGIATRRPGSRESIEDLTRRADMAMYE
                     VKRSGRRHWRVSLLDGD"
     gene            complement(5937..>7043)
                     /locus_tag="VHX39_08300"
     CDS             complement(5937..>7043)
                     /locus_tag="VHX39_08300"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEX3991159.1"
                     /translation="FIIDPSGFIATNKHVIEDAVSVSVVTADGIRYKASIVGVTSKAD
                     IALLKIDASTPLPTVAFGDSDKMRVGDTVIAIGSPFGFDQSVTAGIVSGVNRNIMESP
                     FDDYIQTDATINHGNSGGPLFNVSGEVIGMNSVLFGPGDYSGSIGIGFAIPSDELNFV
                     YKRLIANGSVKAGMLPLRTQQVTWMLARAIGAPGVDGALVDSVDADRNGMMKGQIKPG
                     DVILSFDGQAVSDPRDLARKVAQAAIGVDAALEIFRDGKRLVVHVPILAWPEGIPPVL
                     HNIEFRGLGLDLISGPHGGVLVAGVDPNGSAASSGIKKGDIILRVQSQSVSSPDQALH
                     ALRAKSSGTHDYVAVLLERNNEPLWLPVSLPAKQ"
BASE COUNT         1265 a         2323 c         2207 g         1248 t
ORIGIN      
        1 gggtacgccg cttgcttccg tcacacctcg aacagcgact gaggcgattg atgtcccgaa
       61 aaccgttcca cctcgcatgg ttcctgcagg gctccagcgt ccaggcctgg ggcgagccct
      121 ggaccggcca tatcggcaca acctggcagc agccggatct gttcctcgac atggcccgct
      181 gtctggaacg cgcctgcttc gactacattc tgctggagga ttcctcctat gtcggcgaaa
      241 gcttcggcgg ctcgacggaa ctctacctga agcacgggat cgcagtgccg cgacaagacc
      301 cttcggtggt ggcagcgctg atgacccagg tcacatcgcg aatcggcatc gtccccacct
      361 tcggcacttt cgcctaccca ccctatctgc tggctcgatt ggtcgcgaca ctggaccagg
      421 tatccgccgg ccgcatcggc tggaacatgg tgaccggaag ctccgacttc gcggcgatga
      481 atttcgggct gagcggcatg ccggagcacg atctgcgcta cgacatggcc gacgagtata
      541 tcgacgtggt gcaacggctt tgggcctcct gggaacccgg cgcaatcgtc gctgatcggg
      601 cgtccggcgt cctggtcgat cctaccaagg tccatgcggt gaattacgaa ggaaatttct
      661 tcaagacccg cggcccgctg aattcgggac cggcaccgca gggccgcccg gtgatcgcac
      721 aggccggcgg ctcgcccaga ggccgccagt tcgccgcccg ctatgcggac accatcgtcg
      781 cccacccgaa gggcattgac ggtatgaaag cctaccgcga cgacgtccga acccgcatgg
      841 tggcgcaagg gcgcaatccg gacgactgca aggtgctgtt catggtcgcg ccgatcatcg
      901 gcgagaccga cgcggacgcc caggaacgca agcgcatccg cgaagctcgg gccgccgccc
      961 aaattcccca gcgactcgcg tttctgggca agctgatgaa catcgatttc ggcggcatgg
     1021 acctcgaccg gccattggcc gacgacctgg cgacgaacgg ccatcagcaa acgctggatc
     1081 aattcaagaa gatggccgcc ggccggacgt tgcggcaggc catgagcggc cacaacgtca
     1141 ccgcgctgtc ggtggaattg atcggcacgc ccgacaccgt cgcggcgaaa atgggtgagg
     1201 tgatggcgga agtcggcggt gacggatttt tgttctctat gcagaacgtc agccgccggt
     1261 tgctggctga aatcgaggac ggattgatcc cggcgctgca ggatcgcggc ctggttcggt
     1321 ccgcctatgg ccaccagcag ttccgcgata acctgctgga atattaacgc gtggccttca
     1381 cccctttggg ccggggcgat gatacgatag attgcaccgc gcgctcccga aggaacatca
     1441 caatggcagg tcggatcgag gcaaccctgg cggaacttgg catcaccttg ccccgcccga
     1501 tggcacccat cgcgaactac gtcccctacg tcgtcaccgg caatctcgtc gtcgtgtccg
     1561 gtcaggtccc ggcggtggac ggcaaggtcg cggtcaccgg taaagtcagt tggggcgttt
     1621 ccctcgacca ggcgaaggaa gccgcccgct tgtgcttcat caatgtcctg gtccacctga
     1681 aagcggcatg cggcggcgac ctcgaccggg tgaagcgcgt tgtccgtctc ggcggcttcg
     1741 tcgctgcccc gtccgagttc acccagcatg ccctggtgat gaacggcgct tccgaccttg
     1801 ccgtcgccat cttcggcgaa gccggtcgtc acgcccgcag caccatcggt gttccctctt
     1861 tgcccgccga tgctgccgtg gaagtggaag gtctgtttga aatcgactaa actgccacac
     1921 atgcccgatg gttcggccac gctgactctg acgctgcatg cccggatcgc ggagatcgac
     1981 gccgccgact gggatgcctg cgccggagac ggcaacccat tcgtcagcca cgaattcctc
     2041 agcgccatgg aagacagcgg ttcggccaat tcccgcaccg gctggctgcc gcagcatgcc
     2101 gttctacgcc gggaatccgg tgatatcgtc ggcgtggtcc cgatgtacgc gaaatcgcac
     2161 agctacggcg agtatgtgtt cgaccacggc tgggccaacg ccctggagcg tgttggcgag
     2221 aactattatc cgaaacttca ggcggcggta ccgttcagcc cggtgcccgg tccccggctg
     2281 ttgcgccgcc ccgacgccgg cgttccggtc tcggcgatgg ccagcgctct ggaacaggcg
     2341 tgccagtcgc atgatctgtc ttcggtccac gtcaccttct gcaccgagga tgaatggcgc
     2401 ggcctcggcg acgccggctg gctgcagcgc atcggcatgc agttccattg ggagaacgaa
     2461 ggctacaaat ccttcgatga tttccttggc gcgttgtcat cgcgcaaacg caaggtgctg
     2521 cggcgggaac ggcgtgacgc caacgccgcc ggattgacat ttcatgcgct atcgggcgcc
     2581 gatatcaccg aacgccattg ggacgcattc tacgcttttt accaatccac cgtggaccgc
     2641 aaatggggct ccgcctacct gacccgacgg tttttttcgt tgctggggga acggctgggc
     2701 gacaaggtcg tgctgatgta cgccgaaaac gccggcaaac cggtcgcagg tgccttgaac
     2761 ctggctggcg accaggcgct gtatggccgc aactggggct gccgcggcga ctggccgttc
     2821 ctgcacttcg aactctgcta ctatcgcgcc atcgattggg cgatcgagca tgggctgcgg
     2881 cgcgtcgaag ccggtgccca gggccgccac aagatccagc gcggctatat gccgaagccc
     2941 acatactccg cccactggat cacccatgcg ggactgcgcc gggcggtggc gaatttcctg
     3001 gtcgacgaac gcgcgggaat cgaggccgag atggcggcat tggccgagga ctctccgttc
     3061 cgcaagggcg acgactgatc gtcgcggtcc tcgatcgacg ctactcccct aaaggccgag
     3121 gccgccaggc gcgggacgcc cgatcgggga catccagaaa cgcgagttgc cagcgcatct
     3181 cgtcctcgga caacggaaac agcccgtcgc gattggggcg aagcaccaga tcgggcgtca
     3241 gatgcgcgag cgcgacctgt agaacggccg ccgtctgaac ggtcagaccg gccttccatg
     3301 tcaggctgac gatccccttc gcactgcgca acgcacaggc tcgctcgacc accgccggcc
     3361 gcacatccgc cttgaccgcc agcatggccg tcgcctgctg gttttcgttg cgccgcagcg
     3421 cttccaggat cgcctcatcg tcgagtttgc cggcgcgatc cagggccagc gcgtgtgccc
     3481 gggacaaccg cgagtcctca tcaggcggcg gatcggacgg cgaattgggg tgtgcgagtt
     3541 cgaccgcggt gcgcacggcc tgtgcgacct tgggatcgag atcgttccga gcggccaatg
     3601 tctccaaaag gtggcctgtt acgatctccg ccagcatgcg ttgcgcacgc ggcggcagat
     3661 aggggcggtt gaccagcggg gcctgccagt cggtttgcac ctcggactgt gccgccagcg
     3721 catccagcgt ggcttcgcgg atttgcgccg tcgggttcgc cagcagcgcg cggatagccg
     3781 ccgtgtcgtc agtgccgatg atcgcatcgg acaccgcggc gttgattttt ggccggttcg
     3841 cgaccgccat gatggtcgag ggcggcggtc cggcggcgat cagggtcacc agatcttcct
     3901 gcgtcagcag cggcgaaaag cggatcaccg gttcgcacac catcacggcc gggtcatgcg
     3961 ccagccgcag cacgatgtcg cgcggaccgt cggcgagatc cttcaccgct tccgcgatat
     4021 tcatccggac ccgcagcgcc gcatcggcaa ccatcgccgt caggttggcg accgcatcgc
     4081 gctgcatttg ctgccttgcg tcgtcggcca ggcccggggt cagcgtcgat agctttcggc
     4141 tcaggatcgt acggacccgc gcatcggtat cctcggccag catggcgctg acgtgttcgg
     4201 gcagcgccgg attcagtgcc aggctgacac gcaccgtcac cgagggatcg ttggccaggg
     4261 cccgcagcac ctccgggctg gtcgtgatgg aggcgctctg tcgaacgcgc gtcgcctcgt
     4321 ccaccttcat cagtcgccgt ccagcagcga cacacgccag tggcgccggc cactgcgctt
     4381 cacttcatac atcgccatgt cggcccgccg cgtcaggtcc tcgatcgatt cccggctgcc
     4441 cggtcggcga gtggcgatcc cgaccgacac gccgagcttg ggaaacgttt cgggcagcat
     4501 cgactgcaat gccagcggcg cggtcctgca cagatggtcg gcacgctccg ccgcggtcat
     4561 gtgatcggcg ccgctgagcc agaccgcgaa ctcatcgcca cccagccgcg tgatcaaatc
     4621 acttggccgc accagtttgc gcagcatgtc cgcaagaccg atcagcacct ggtcgcccgc
     4681 cccgtggccc aggcggtcgt taacggattt aaacgaatcc acatcgacga acatcagtgt
     4741 ccctgcctcg gcgcctcggt ccagccgggt gatgtcgcgg tgcatctctg cgatgaacgc
     4801 gcggcgattg agtaagccgg tcagcgggtc ggtccgggcc tgctgcacaa tgtcctgctg
     4861 caacgcctca tactccagga tcatccgcac gatgaagacg gccgatcccg ccagcatcgt
     4921 gtcttcctga tcccagggac gcgcatcggc gacgcgccag atcgccaggc cggcatgggc
     4981 actgaagcgc gtctggcacc cgaccacgag gacgacacga ccatcggggt tcatgccgtg
     5041 gctcggttcg gatgtcggcc gcgccacgag tcggcaggct gtttccagca cctcggaagc
     5101 ccctggtccg cattcgtgca atacctcgat cggcgcattg cgcgataccg cgccgatcac
     5161 cgccgcaccc tcggcgccca aggcatgaac cagcgcccaa agtgccgtat cgatcatgct
     5221 gtcggcgtcg gtctcacgcc cgacccgcga tatgatgtga tgcaacacct gtccccgccg
     5281 cagccggccc gcgatctgcg aggtctgcgc gtcgctgtcg gtcatgtcga caccaatgcc
     5341 gcgcgcgccg atgacctgac cggcggcatt gtgcagcggt gtggccgaaa cagtgatcag
     5401 cgccagccgg ccatccgcgc atcgaagcca ggcgcggtgg cggcgcattt ccaccaccgg
     5461 acggaacgga ttgaacgtcg ggccggtgcc gtcgtcacca accagtacat ccgccggctg
     5521 gccgatcagc gcgctcgccg gccagcccag tacggtgtcg ggcatcatga acgcgaaacg
     5581 gccttcggcg tcggtttcga acgccaggtc agcggccagg ccgacgagat tctgccagcg
     5641 ctggcggctc tccatgagcg cgtcgcgaat actgtcgtgt ggcggcgctg gcggcgaagc
     5701 cgcgacattg ggatcgagaa gcagttcagt catgcgcggc gcatcccgac gagacaggac
     5761 cctatgaaag ccacgaaatg gttaatgaaa ggttgccggc agcggatttg tttgggattg
     5821 gaagcgatac cgccgtgaca cgggtgtctc tgccttgata gcggcgcctg acggcaggac
     5881 gcgttggagc cgacgtcgtt cgccccgcca aagccgatca gcgcgccagt agcggattac
     5941 tgctttgccg ggagcgagac gggcagccag agaggttcat tatttcgctc caacaaaacc
     6001 gccacgtaat catgcgttcc tgacgacttt gcccgcaacg catgtaaggc ctgatcggga
     6061 ctggagacgc tctgagactg cacacgcagt atgatatcgc ccttcttgat gccgctgctc
     6121 gccgcagacc cgttcggatc gaccccggcg accagcactc cgccatgcgg tccggagatc
     6181 agatcaaggc caaggcctcg aaactcgatg ttgtggagaa ccggcgggat gccctccggc
     6241 caggccaaaa tcggaacatg gacgaccaag cgcttgccgt cgcggaatat ctccagcgcg
     6301 gcgtcgacgc cgattgccgc ctgcgcgacc ttgcgagcca gatcccgggg gtccgagacc
     6361 gcctgtccat cgaaggacaa gataacgtcg cccggtttga tctgaccttt catcatgccg
     6421 ttgcgatcgg catccaccga atcgaccagc gcgccatcca ccccgggtgc gccaatcgcc
     6481 cgagcaagca tccaagtcac ttgctgggtg cggagtggca gcatgccggc cttgaccgac
     6541 ccattcgcga tcaggcgctt gtagacgaag ttcaattcat cggacgggat ggcgaagccg
     6601 ataccaatcg accccgaata gtctcccggc ccgaacagga cactgttcat gccgatcacc
     6661 tcacccgaga cattgaacag cggaccgccg gaattgccat gattgatggt ggcgtcggtt
     6721 tggatgtagt cgtcgaatgg gctttccatg atgttgcgat tgacgccgct gacgatgccg
     6781 gcggtaacgc tctggtcgaa cccaaacgga ctgccgatcg cgatgacggt atctccgacc
     6841 ctcatcttgt cgctgtcgcc aaacgcgacg gtcggcagcg gtgtgctggc gtcgattttc
     6901 agcaacgcga tgtccgcctt ggacgtcacc ccgacaatcg aggccttgta gcgaatgccg
     6961 tcggcagtca cgacggacac cgagaccgcg tcttcaatga catgcttgtt ggtcgcgata
     7021 aagccggacg gatcgatgat gaa
//
LOCUS       DATAVD010000448         1925 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2832866, whole genome shotgun sequence.
ACCESSION   DATAVD010000448 DATAVD010000000
VERSION     DATAVD010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1925
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2832866"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..439)
                     /locus_tag="VHX39_08305"
     CDS             complement(<1..439)
                     /locus_tag="VHX39_08305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019087801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEX3991160.1"
                     /translation="MKDAHNMSRPPFPSAPTTPVTPAASARPGATMVRPGPRDPSERR
                     TLVVGRGISVQGVVQDAERLVVEGTVEATMIHATELAIAPGGVFKGEVEVEDAEIAGT
                     IDGTLTARGSLIIRGSGKVLGTARCRRLQVEDGGQISGRIEMIT"
     gene            complement(735..1412)
                     /locus_tag="VHX39_08310"
     CDS             complement(735..1412)
                     /locus_tag="VHX39_08310"
                     /inference="COORDINATES: protein motif:HMM:NF018917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EI24 domain-containing protein"
                     /protein_id="HEX3991161.1"
                     /translation="MFAPIARALSQLDDPTFRGVLLRSIAWSIACFAALHIGAVWIIH
                     RILTLHGWLAWGADILGSVGVSLLTLWVFLPVATAIGMLYLDRVARAVESRFYPWLPP
                     PQGAPLLEQIWDGIAVALTVLVLNIAALILIFLLPGVGLILGWMIGAYAIGRGLFVAI
                     AMRRMPRPMAESLYRASRGVILTQGAIMALAAYVPVLNLLLPIIGVAAMVHVLDMALA
                     AADRPGR"
     gene            1505..>1925
                     /locus_tag="VHX39_08315"
     CDS             1505..>1925
                     /locus_tag="VHX39_08315"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX3991162.1"
                     /translation="MTYVPAPHFTQNWVLSKPSAQGHRGIVVSQVRSAAEAGVAILDA
                     GGNAVDAAVATALALAAVEPWNSGLGGIGFALVHRAGQPTADVVDFGPVAPRNLDPSA
                     FKLTGRMKQDLFAWPEVEGDANIHGPLSFAIPSSAAGY"
BASE COUNT          382 a          606 c          600 g          337 t
ORIGIN      
        1 cggtgatcat ctcaattcga ccgctgatct ggccaccatc ctcgacctgc aggcgccggc
       61 agcgagccgt ccccagaacc ttgccgctgc cacggatgat caagctgcca cgggcggtca
      121 acgtgccatc gatggtgccc gcgatttcgg cgtcttccac ctcgacttcg cccttgaaca
      181 cgccccccgg cgcgattgcg agttcggtcg catggatcat cgtcgcttcg acagtgcctt
      241 cgacgaccag gcgctcggca tcctgcacca caccctgtac actgatgcca cgtccgacaa
      301 cgagtgtccg gcgctcggac gggtcgcgtg ggcccgggcg gaccatcgtc gcgccgggtc
      361 gagcggaagc agccggggtg actggtgtgg tcggagcaga cgggaaaggc ggtcgggaca
      421 tgttatgcgc atccttcagc ggagctgggc ggaaaggagg aacgccaagg ccgctatccg
      481 aaggcggctg agcgggactc acggtggcgg ggcgaaaatc cggatcggat tgttccgctt
      541 ttgatggctc cgggacgatc ggcaggcccg ctggcagcgg gacttcgatc gaggccgaag
      601 acggctcgtc gggtttgcga cgtttgaaca agacactcta ccaaactgaa agagaagcct
      661 tcgcctacca tggagcgtgc ctggcaaaca acatcccgtt tatgttaccg gcattgaacg
      721 gccttccaag cccgttaccg cccgggtctg tccgccgcgg ccagagccat gtcgaggacg
      781 tggaccatgg ctgccacgcc tatgatcgga agcaataaat tcaggacggg gacgtatgcc
      841 gcaagtgcca tgatcgcacc ttgcgtcagg atgacgcccc gactcgcccg atacaacgat
      901 tccgccatcg ggcgtggcat ccgtcgcatg gcgatcgcca caaacagccc gcgtccgatt
      961 gcatacgcgc caatcatcca gcccaggatc aggccgacac caggcagtag aaaaatcagg
     1021 atcagcgccg cgatattcaa aaccaggact gtcagggcca ccgcgatgcc gtcccagatc
     1081 tgttcgagga ggggtgcgcc ttggggcggc ggaagccacg gataaaaccg gctttcgacg
     1141 gctctggcga cccggtcgag atacagcatg ccgatggccg tcgcgacagg tagaaatacc
     1201 cacagtgtga gtagcgatac tcccaccgaa ccgagaatgt cggcgcccca tgccagccag
     1261 ccgtgcagtg tcaggatacg gtgaatgatc cagaccgcgc cgatatgtaa cgctgcgaag
     1321 caggcgatcg accaggcgat gctgcgtaac aacactcccc tgaacgttgg gtcatccagt
     1381 tgactgagcg cgcgcgctat cggtgcgaac acgtttgacc ttcacggacc gacatttcac
     1441 gagaacacat aacatcgcct atagtcacgg cacacatccc gaattcccat gaggagagaa
     1501 ttggatgacc tacgtcccag ccccccactt cacccagaat tgggtgctgt cgaagccctc
     1561 tgcccagggg catcgcggta tcgtggtctc tcaggttcgc agtgccgccg aggccggagt
     1621 cgcgatcctc gacgctggcg gcaatgcggt ggatgccgcc gtggcgaccg cgttggcact
     1681 cgccgcggtc gagccgtgga attcgggtct cggcgggatc ggatttgcat tggtccatcg
     1741 tgcggggcag ccgacggcgg atgtcgtcga tttcggcccg gtcgccccgc gaaatctcga
     1801 cccctcggcg ttcaaactga ccggccgcat gaagcaggat ttgtttgcgt ggccggaagt
     1861 ggaaggtgat gcgaacattc acggcccgct gtcgttcgcg atcccgtcct cggcggccgg
     1921 atacg
//
LOCUS       DATAVD010000449         1603 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1158171, whole genome shotgun sequence.
ACCESSION   DATAVD010000449 DATAVD010000000
VERSION     DATAVD010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1158171"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VHX39_08320"
     CDS             complement(<1..195)
                     /locus_tag="VHX39_08320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3991163.1"
                     /translation="MQIPEVVILGGGFGGLEAAKALERAPVRVTLIDRQNHHCFQPLL
                     YQVATAALSAADVAWPIRHIL"
     gene            complement(258..533)
                     /locus_tag="VHX39_08325"
     CDS             complement(258..533)
                     /locus_tag="VHX39_08325"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045735 - nutrient reservoir activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3991164.1"
                     /translation="MGVFGASEDARTFDYRAGDVGYVPFAMGHYIENTGNEMLRFLEM
                     FRSPLFVDVSLNQWMALTPPELVQGHLNLDPAVMEALRKEKSPIVPA"
     gene            complement(424..1479)
                     /locus_tag="VHX39_08330"
     CDS             complement(424..1479)
                     /locus_tag="VHX39_08330"
                     /inference="COORDINATES: protein motif:HMM:TIGR03404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045735 - nutrient reservoir activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3991165.1"
                     /translation="MNQLFRRNFLLTSAGLAGAATAVAAHADTLSQPSRHPGFGGNDP
                     GPRDPVRDGENPDLLNPPKTDHGTLPNLRFSFADAHVRQTDAGWTRQVSQRELGIATT
                     LAGVDMRLNRGAVRELHWHKQAEWAYMLYGSARITAVDAMGRNFVDDVHEGDLWYFPS
                     GIPHSIQGIGDDDCEFLLVFDDGSFNEDSTFLITDWFKHIPAPVLGKNFGVKADYFGH
                     TPDPEQRYIFPLPVPGPLASDRVPGNGDVPDSFSYRLAAQAPRKMKSGQVRIADSTNF
                     KVAKTIAAALVEIEPGGMRELHWHRNADEWQYLHRRRGPDGCVRCVGRCAHFRLPRRG
                     RRLRSVCDGSLYREYRQ"
BASE COUNT          322 a          530 c          470 g          281 t
ORIGIN      
        1 cagaatatgg cggatcggcc aagcgacatc ggcggccgac aacgccgcgg tcgcgacctg
       61 atacagcagc ggctgaaagc agtggtggtt ctgccggtcg atcagcgtca ccctgacggg
      121 cgcacgctca agcgccttgg ccgcttcaag gccgccaaat ccgccgccca gaataacaac
      181 ttcagggatc tgcatgcgcg gccccaatca cgaacctgcc gacctgtacc agcaggccac
      241 gccccgtcgg aagcccgtca tgccggcacg atcggcgact tctccttgcg taaagcctcc
      301 atgacggcgg ggtcgaggtt caggtgtccc tgaaccagct ccggcggcgt caacgccatc
      361 cactggttca acgagacatc cacaaacagc ggactgcgga acatctcgag gaaacgtagc
      421 atctcattgc cggtattctc gatatagtga cccatcgcaa acggaacgta gccgacgtcc
      481 ccggcgcggt agtcgaaagt gcgcgcatct tccgacgcac cgaacacacc catccggccc
      541 tcgccggcga tgtaagtatt gccattcgtc ggcattccgg tgccagtgca gctcccgcat
      601 gccgccgggc tcgatctcga ccaatgcggc ggcaatggtc ttggcgactt tgaagttggt
      661 ggagtcggca atcctgacct gccccgactt catcttccga ggcgcctgag ccgccaggcg
      721 atagctgaaa ctgtcgggaa cgtcgccgtt gccaggaacc cggtccgacg ccagtggccc
      781 cggcaccgga agcggaaaaa tgtagcgctg ctcgggatcg ggcgtatggc cgaagtagtc
      841 cgccttgaca ccgaaattct ttcccagcac cggggcgggg atatgcttga accagtcggt
      901 gatcaggaac gtgctgtcct cgttgaagct gccatcgtcg aacaccagca ggaactcaca
      961 gtcgtcgtcg ccgatacctt gtatcgaatg cggaatgccg gacggaaaat accacaggtc
     1021 gccttcatgc acatcgtcga cgaaattgcg tcccatggcg tccacagcgg tgatgcgagc
     1081 actgccatac agcatgtacg cccactccgc ctgtttgtgc cagtgcagtt cccgcaccgc
     1141 gccgcggttc aaccgcatgt cgaccccagc caaggtcgtt gcgatcccga gctcgcgctg
     1201 gctgacctga cgggtccacc cggcatcggt ctggcggaca tgcgcgtcgg cgaaggagaa
     1261 acgcaagttc ggcagcgtgc cgtgatcggt cttcggcggg ttcaacaggt cgggattttc
     1321 gccgtcccgg accggatcgc gcggtccggg atcgttacca ccaaagccgg ggtgcctgga
     1381 tggttgcgac agcgtatcgg catgcgccgc gacggccgtt gcagcccccg ccaaacccgc
     1441 gctggtcaac aggaagttcc gacgaaaaag ctggttcaca atcgaacctc ccaatccttg
     1501 aggcaaacac gcacgtaagc tcgatgaccg ccggcctgtt cccaccccac cgatcatgtt
     1561 tgcgtgcgcc aaccccactg ccatgtgtag tccggggact gtc
//
LOCUS       DATAVD010000450         1948 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3205630, whole genome shotgun sequence.
ACCESSION   DATAVD010000450 DATAVD010000000
VERSION     DATAVD010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1948
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3205630"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            235..1284
                     /locus_tag="VHX39_08335"
     CDS             235..1284
                     /locus_tag="VHX39_08335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3991166.1"
                     /translation="MSRLELVGLTKRFGAHAAVDALDLTVESGKLVSLLGPSGCGKTT
                     TLRLVSGFAVPDAGSISVAGQTVSSAGRVVPPERREMSMIFQSYALWPHLTVAENVAY
                     GLKLRRQSRAEIEQRVRAILETMQLRPYEARYPAELSGGQQQRVGLARALVVEPKILL
                     LDEPLSNLDANLREDMRFEIRRLHDRFHYTTIYVTHHQAEAMTTSDLIAVMRDGKIEQ
                     SGSPEEIYERPVTEFVARFIGSTNILRGRRVGGRNADCDGILVICETGDFPTDGSAIV
                     SIRPHRIVLGAALPESTQGTVERAVYLGAQRHFIVALDSGTRLQVMTSSDTRASVGER
                     VGLTLPPAHCRALVR"
     gene            1308..>1948
                     /locus_tag="VHX39_08340"
     CDS             1308..>1948
                     /locus_tag="VHX39_08340"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3991167.1"
                     /translation="MPISRRAVLTATAGFAMARSAVAAPPEPAVLTPELIDAAKKEAK
                     IAWYTADDLVLATRVSKAFETKYDMKVQLERSGAERIYQRIAQEYASNISECDVATTS
                     DLGHTVSWNASGWLASFVPSETAHWGEKGIGPNGIYIVDKFTMVISGYNSRLVKAEDA
                     PKSWNDLLDPKWKGKLVKAHPGYSGAITNETYALSHLLGWEFYENLAKQGVLQV"
BASE COUNT          382 a          599 c          594 g          373 t
ORIGIN      
        1 cagccatttc ctgaaccagg atctggcaaa tatctggctc gacaaatagc cgcgggtcgc
       61 gggcgaaaac ccggcacgga caccgcactg ccgcccgttg cgcctgccac cctccgccgg
      121 tagtttcccg gcctcacgaa catcgtaacc gctgcaaggc gcgtccaacg gaggccgaag
      181 tttgcctgtc tttttgctgc ggccgtccga cgccgcaacc ttgccgatgc gctgatgtcc
      241 aggctggaac tcgtcggtct gaccaagcga tttggcgccc atgcggcggt ggatgcgttg
      301 gaccttacag tggaaagcgg caagctggtc tcgctgctcg gcccttccgg gtgcggcaag
      361 acgacgacct tgcgcctcgt atccgggttc gcggtgcccg atgccggcag catctcggtg
      421 gctggccaga ccgtgtcgtc tgctggccgt gtcgtcccgc ctgaacggcg ggagatgtcg
      481 atgatcttcc aaagctacgc tctctggccg catctgacgg ttgcagagaa cgttgcgtac
      541 ggactcaaac tgcgtcgcca gtcccgtgcc gagatcgagc agcgcgtgcg ggcgatactc
      601 gaaacgatgc agttgcggcc atacgaggcc cgctatccgg ccgaactgtc cggcggccaa
      661 cagcagcgcg tcggccttgc ccgcgctttg gtggtagaac caaaaatcct gctgctggac
      721 gagccgttgt ccaaccttga cgccaatctc cgcgaggaca tgcggttcga gatccgccga
      781 ttgcacgacc gttttcacta cacgacgatc tacgttaccc accaccaggc cgaagcgatg
      841 accacgtccg acctgattgc ggtcatgcgt gacggcaaga ttgagcagtc cggctcaccc
      901 gaggaaattt acgaacgccc ggtgaccgaa ttcgtcgctc gcttcatcgg cagcaccaac
      961 attcttcgcg gccgccgcgt cggtgggcga aatgcggatt gtgacggaat tctcgtgata
     1021 tgcgaaaccg gtgactttcc gacggacggc agcgccatcg tctcgatccg gccgcaccgt
     1081 atcgtacttg gtgccgcgct gccggaaagc acccagggaa ccgttgaacg cgcggtgtat
     1141 ctgggcgcgc aacggcactt catcgtcgcc ctcgattcag gaaccagact ccaggtcatg
     1201 acatcgtccg acacacgcgc ctcggtgggc gagcgtgtcg gcttgacctt gccgccagcc
     1261 cactgccgcg ccctggtgcg gtgaacaaca acaaacggga gatcgtcatg ccaatcagcc
     1321 gccgcgcagt cctcaccgct accgccggtt tcgcgatggc acgcagcgcc gtggccgcgc
     1381 ctccggagcc ggccgttctg acgccggaac tgatcgatgc ggccaagaaa gaggctaaga
     1441 tcgcctggta cactgctgac gatcttgttc tcgcgacccg ggtgtcgaag gcgttcgaga
     1501 caaagtacga catgaaggtg caactcgaac gctcgggagc cgagcggatt tatcagcgga
     1561 tcgcccagga gtatgcgtcg aatataagcg aatgcgatgt ggcgacgacg tccgatcttg
     1621 gtcacacggt gtcttggaat gcatcgggtt ggctggcgtc gtttgttccg tccgagaccg
     1681 cacactgggg cgagaagggc attggaccga atgggattta catcgtcgat aagttcacga
     1741 tggtgatatc cggctacaat tcccgcctcg ttaaggccga agacgcacct aaatcctgga
     1801 acgatctgct ggacccgaaa tggaagggca agctggtaaa ggcgcatccc ggttattccg
     1861 gagccattac caatgagacc tatgcattga gccatctgct cggttgggag ttttacgaga
     1921 atctggcgaa gcaaggggtg ctgcaggt
//
LOCUS       DATAVD010000451         5677 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1717770, whole genome shotgun sequence.
ACCESSION   DATAVD010000451 DATAVD010000000
VERSION     DATAVD010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5677
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1717770"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..557)
                     /locus_tag="VHX39_08345"
     CDS             complement(<1..557)
                     /locus_tag="VHX39_08345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M3"
                     /protein_id="HEX3991168.1"
                     /translation="MTDTPSFADIAEPKPTQAGLAEDYAAIGATLDRGDRRAALAAWD
                     GLRRRYDTWSALVHLRFAQNTTDATARADRDYADALAPEAADLEVALKRRLLADHDRP
                     GLAALVGEHALRLWDTDVTTFDPAIKSDLEEEARVASRYTELLASSKLTIAGQTVNLA
                     GLGPFAEDPDRSVRHEAERVRWDFFA"
     gene            complement(550..2328)
                     /locus_tag="VHX39_08350"
     CDS             complement(550..2328)
                     /locus_tag="VHX39_08350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEX3991169.1"
                     /translation="MRGIGPFLKDAWRLSRPYFMTSEEKWSARGLLLAIIAMNLSVVG
                     LTVIFNFWHRDFYNALQVKDWKAFVQLLFWYRVSADGFMPGFTVLAAIYIALGVYSVW
                     VNQYLQIRWRRWMTRQFLGEWLADRAYYNISLTRNPGSIGTDNPDQRIAEDLRDFTDV
                     TLSLSLGLLSNIVSLGSFVVILWGLSGSLEMFGIPIPGYMVWVALLYAVIGTWLTHLV
                     GNPLSLLSFRQQRVEADFRYALVRVRENMESIALYRGEQEEVVNLRDRFVAVVANWRQ
                     IMTRTKLLNSLTYGYGQIAVIFPFAVAAPRYFFGKMQLGGLMQTAGSFGRVQDSMSWF
                     VNSYAQLAVWRAIVERLATFHRAIVKARAETHGGFEPTASTDGNVHLSDVTMTLPDGT
                     KLLEGVDLKLTPGHSIVITGRSGSGKTTLFRVLSGIWPFGSGYVQIPPNSFFLPQRPY
                     VPLGTLRHVITYPNAMDSFSQADMVQVLRDVGLPQFCDRLDHDDNWPLRLSMGEQQRL
                     GFARALLAKPDWIFLDEATASVDPAAETDLYRVLKQRLPNATLVSIAHRPSVAAFHEQ
                     RMNLVRNPGEPGTMTTSSVVPEATGD"
     gene            complement(2336..2818)
                     /locus_tag="VHX39_08355"
     CDS             complement(2336..2818)
                     /locus_tag="VHX39_08355"
                     /inference="COORDINATES: protein motif:HMM:NF019032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1499 domain-containing protein"
                     /protein_id="HEX3991170.1"
                     /translation="MNPLAWLIGLVLPACGFPAAEGLPTPPPMDVTHIVRPASPNTAL
                     AAPAGFSPPADIVTPRYKVPADRLFVLVREVAASQPRTYQAALYPEQLQADYVVRSAV
                     FNFPDQVMLQVLKDGSDGSGLIVYSRSVYGHSDLGVNRKRIEAWLAALQTKLPPSSER
                     "
     gene            2927..3763
                     /locus_tag="VHX39_08360"
     CDS             2927..3763
                     /locus_tag="VHX39_08360"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3991171.1"
                     /translation="MQSNSIQIHPVGGAVGAEIAGVDLSEPLTEAVRETIRKTLADRG
                     VVFFRDQSLTEEQHIGLARRFGNINVNRFFTHADGYPEIALVVKEPDQTRNIGGGWHT
                     DHSYDQTPALGSILYAREVPPTGGDTLFSSMYAAYDALSDGLKRTLGGLLAVHSSRHV
                     FGVPRPDMQGRYRNAEAAVQDAVHPAVITHPESGRKALYVNPGFTLRFDGWTKEESQP
                     LLEFLYRHAAKPEFGCRFVWRNGSIAFWDNRSTWHYAVNDYQGERRLMHRITVEGCPL
                     AA"
     gene            complement(3779..4174)
                     /locus_tag="VHX39_08365"
     CDS             complement(3779..4174)
                     /locus_tag="VHX39_08365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991172.1"
                     /translation="MRIGFLPSDFNPMLLMLGEAEDCRALGGVFRRFARDGADVVFAD
                     LKFCRMTGVEVRLTASSGPPCVEQHTGHAFVLRVPSGTAASFAEQLDDLSEPHRVAGS
                     ETLDCGTEDGIAVKVSRGEYTDDFLAAGT"
     gene            complement(4174..4350)
                     /locus_tag="VHX39_08370"
     CDS             complement(4174..4350)
                     /locus_tag="VHX39_08370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991173.1"
                     /translation="MIVVSDVAVGAKLVIAGGLSAEVIENMGDGEWLRVRILSGIDEG
                     AEELCHATDVLEIT"
     gene            complement(4361..4921)
                     /locus_tag="VHX39_08375"
     CDS             complement(4361..4921)
                     /locus_tag="VHX39_08375"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: protein motif:HMM:NF007479.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019380 - 3-phenylpropionate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate/cinnamic acid dioxygenase
                     subunit beta"
                     /protein_id="HEX3991174.1"
                     /translation="MSDVLDKPVRGLAWFQLKQEIEDFLYLEADLLDQRMFREWLDLL
                     AEDLIYFMPIRRNVKFGQHAEKENTRQGEGISWFDEDKWTLGKRVEQILTGVHYAEEP
                     LSRVTHMVSNVRLLDVTPSAENPAEVTVGSRFLVYQNRVEYETNTFVGRRIDTLRRNG
                     GGWLIARREMILEQNVLMAKNLSILF"
     gene            complement(4918..>5677)
                     /locus_tag="VHX39_08380"
     CDS             complement(4918..>5677)
                     /locus_tag="VHX39_08380"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005488 - binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RHO alpha subunit C-terminal catalytic
                     domain-containing protein"
                     /protein_id="HEX3991175.1"
                     /translation="ANWKFAAENFLGDTYHNPSHRSVDMIGIGPSARAGAAGRRDNEY
                     NKGQHIWVNYPAGHGVHSVWMPEDFDYQPSYAQYPIVDEYFRHCFYERKKRLGDKARI
                     MPFTGNLFPNTSYHGRQPRGLCVWHPHSPTETEAWRFFMVDADAPAEVKDVLRRFYMR
                     YSGPAGMTEQDDMENWLYATKASTGTIARRYPFNYQQSLTNHTRGDMLPGDVNVQISE
                     QNARNYYDVYARYLKGDGWDSLLGNGEAERQAAE"
BASE COUNT         1010 a         1734 c         1917 g         1016 t
ORIGIN      
        1 gcgaagaaat cccagcgcac ccgttcggcc tcatgccgaa ccgaccggtc cgggtcctcg
       61 gcgaacggac ccaatccggc caggttgacc gtctgcccgg cgatcgtcag cttggaggac
      121 gccagcaatt cggtatagcg cgatgcgacc cgagcttcct cctccaggtc gctcttgatc
      181 gccggatcga acgtggtgac gtcggtgtcc cacaggcgca gcgcgtgctc gccgaccagc
      241 gcggcaagcc cggggcgatc gtgatccgcc agcaggcgcc gcttcagcgc gacctccagg
      301 tcggcggcct ccggcgccag cgcatcggca tagtcgcggt cagcccgagc ggtcgcgtcg
      361 gtggtgtttt gcgcgaaccg cagatgcacc agcgccgacc aggtatcgta gcgccggcgc
      421 agcccgtccc aggctgccag cgcggcgcga cgatcgcctc gatccagcgt cgcgccgatc
      481 gcggcatagt cctccgccag cccggcctgg gtcggcttcg gttcggcgat atccgcgaag
      541 ctaggtgtat cagtcaccgg tcgcctccgg caccaccgag gacgtggtca tggtcccggg
      601 ctcgccgggg ttccgcacca ggttcatccg ctgctcatgg aaggccgcga ccgatggccg
      661 atgcgcgatc gacaccaggg tggcgttcgg cagccgctgc ttcagcacgc ggtaaaggtc
      721 cgtctcggcg gccggatcga cgctggcggt ggcctcatcc aggaagatcc agtcgggttt
      781 cgccagcagc gccctggcaa agcccagacg ctgctgttcg cccatcgaca gccgcagcgg
      841 ccagttgtcg tcatggtcca gccggtcgca gaactgcggc agcccgacat cgcgcagcac
      901 ctgcaccatg tccgcctggc tgaacgaatc catcgcgttg ggataggtga tcacatgccg
      961 cagggtaccc agcgggacat acggccgttg cggcaggaag aaggagttcg gcgggatctg
     1021 cacgtatccg gacccgaacg gccagatgcc ggacagcacg cggaacagcg tggtcttgcc
     1081 ggaccccgac cgcccggtga tgacgatgga gtgaccggga gtcagcttca ggtccacgcc
     1141 ttccagcagt ttcgtgccgt ccggcagggt catggtgaca tcgctgagat ggacgttgcc
     1201 gtcggtcgaa gcggtcggct cgaagccgcc atgcgtctcg gcccgagcct tgacgatggc
     1261 tcggtggaac gtggcgagac gttcgacgat ggcgcgccat accgccaact gggcatagga
     1321 attgacgaac cacgacatcg aatcctgcac ccgcccaaac gagcccgcgg tttgcatcag
     1381 cccacccaac tgcatcttgc cgaagaagta acgcggcgct gcgacggcaa acgggaagat
     1441 gaccgcgatc tggccgtagc cgtaggtcag ggagttgagc agcttcgtcc gcgtcatgat
     1501 ctgccgccag ttggcgacca ccgccacgaa gcggtcgcgc aggttgacca cttcctcctg
     1561 ctcgccgcgg tagagcgcga tactttccat gttttcccgc acgcggacca gggcatagcg
     1621 gaaatccgcc tcgacccgct gctgcctgaa gctgagcagc gaaagcggat tgccgaccag
     1681 gtgggtcagc caggtgccga tgacggcata cagcagcgcg acccacacca tatagccggg
     1741 gatcgggatc ccgaacatct ccaacgaccc ggacaagccc cacaggatga cgacgaaact
     1801 gcccagcgac acgatgttgg acagcagacc gaggctgagg ctcagggtga cgtcggtaaa
     1861 gtcgcgcagg tcctcggcga tacgctggtc ggggttgtcg gtgccgatcg agcccgggtt
     1921 gcgggtcagg ctgatattgt aataggcgcg atccgccagc cactcgccca ggaattggcg
     1981 ggtcatccag cgccgccagc ggatctgcaa atactggttt acccagacgg aatagacccc
     2041 aagggcgatg tagatggcgg ccagtacggt gaaccccggc atgaagccgt cggccgacac
     2101 gcggtaccag aaaagcagtt gaacgaatgc cttccagtcc ttgacctgca gggcattgta
     2161 gaagtcgcga tgccagaaat tgaagatgac ggtcaggccg acgaccgaaa ggttcatcgc
     2221 gatgatcgcc agcagcaggc cgcgggcgga ccatttctct tcagaggtca tgaagtaggg
     2281 ccggctgagc cgccaggcgt ctttgaggaa ggggccgata ccacgcatga acgggttatc
     2341 tctcgctgga tgggggaagt tttgtttgca gtgcagcaag ccacgcttcg atgcgcttgc
     2401 ggttcacgcc gaggtcggag tggccgtaca cactgcgtga atacacgatc aggccgctgc
     2461 catccgaacc gtccttcagc acctggagca taacctggtc ggggaagttg aacacggcgc
     2521 tgcggacgac atagtcggcc tgcagttgct ccggatacag cgcggcctga taggtccttg
     2581 gctggctggc cgcgacctcc cgcaccagga cgaacagccg gtcggcggga accttgtagc
     2641 gcggcgtgac gatgtcggcg ggcgggctga aacccgcggg cgcggccagc gcggtattcg
     2701 gactggcggg gcgaacgata tgggtgacgt ccatcggcgg cggcgtcggc aacccctccg
     2761 ccgcgggaaa tccgcaggcg ggcaggacca ggccgatcag ccaggccagc gggttcatcc
     2821 ggcggaagca ggcgtcattc cacctctgat gcctggaaag cggggaggcg gcaagtcaat
     2881 ttgaggaacc acgtatttgc tgtaaggtcg gcaggggagg gccgatatgc aaagcaactc
     2941 gatccaaata catccggtcg gcggtgcggt aggtgccgaa atcgccggtg tcgacttgtc
     3001 cgaaccgttg accgaggccg ttcgcgagac cattcggaag acccttgccg accgcggcgt
     3061 ggtgttcttt cgcgaccagt cgctgaccga ggaacagcat atcggtctgg cgcgccggtt
     3121 cggcaacatc aatgttaacc gctttttcac tcatgccgat ggctatccgg agatcgctct
     3181 ggtggtgaag gagccggacc agacccgcaa tatcggcggc ggctggcaca ccgaccacag
     3241 ctacgatcaa acgcccgcgc tcgggtcgat cctgtacgcc cgggaggtgc cgccgacggg
     3301 tggggacaca ttgttctcca gcatgtatgc cgcctacgac gcgctgtcgg acgggttgaa
     3361 gcggacgctg ggcgggctgc ttgcggtcca ttccagccgg cacgtgttcg gcgtgccgcg
     3421 gccggacatg cagggccgct atcggaacgc ggaggcggcg gtgcaggacg cggtgcatcc
     3481 ggcggtgatc acccacccgg agagcggccg gaaggcgctg tatgtgaacc ccggtttcac
     3541 gctgcgcttc gacggctgga ccaaagagga gtcccagccg ttgctggagt tcctgtatcg
     3601 ccacgcagcg aagcccgaat tcggctgccg gttcgtgtgg cggaacggct cgatcgcgtt
     3661 ctgggacaat cggtcgacct ggcattatgc ggtgaacgac tatcaggggg agcggcggct
     3721 gatgcaccgg atcaccgtcg agggatgccc gctggcggca tagcgtgggg gccggcggtt
     3781 aggtgccggc ggccagaaag tcgtcggtgt attcgccgcg cgataccttc accgcgatgc
     3841 cgtcttccgt gccgcaatcc agggtttccg atcctgcgac acggtgcggt tccgacaggt
     3901 cgtccaattg ttcggcgaag cttgcggcgg tgccggatgg tacacgcaag acaaaggcgt
     3961 ggccggtgtg ttgttccacg caagggggac cggaggaggc tgtcaggcgt acctccaccc
     4021 cggtcatccg gcaaaacttc aggtcggcaa acaccacatc cgccccgtcg cgggcgaagc
     4081 gccggaagac gccgccgagg gctcggcaat cctcggcctc cccgagcatg aggagcatcg
     4141 ggttgaagtc gctgggcagg aagccgatgc gcatcatgtg atttcgagca cgtccgtggc
     4201 gtggcatagt tcctcggcac cttcgtcgat gccggacagg atacggacgc gcaaccattc
     4261 gccgtcgccc atgttctcta tcacctcggc ggacaagccg ccggcgatca ccagtttcgc
     4321 gccgacggcg acgtcgctga ccacgatcat tgggggtcct tcagaacagg atgctcaggt
     4381 tcttcgccat caggacgttc tgttccagga tcatttcccg gcgggcgatc agccatccgc
     4441 caccgttgcg gcgcagcgtg tcgatgcggc ggccgacgaa ggtgttggtt tcgtattcga
     4501 cgcggttctg gtagaccagg aagcggctgc cgacggtgac ttcggcgggg ttttcggcgg
     4561 atggggtgac gtccagcagg cgcacgttgc tgaccatatg ggtgacacgg gacagcggtt
     4621 cctcggcgta atgaaccccg gtgaggatct gttcgacgcg cttgccgagg gtccatttgt
     4681 cctcatcgaa ccaggaaatg ccttcgccct gtctggtgtt ttccttttcg gcgtgctggc
     4741 cgaactttac gttgcggcgg atcggcatga agtagatcag gtcctcggcc agcaggtcga
     4801 gccactcgcg gaacattctc tgatccagga ggtcggcttc caggtacagg aaatcctcga
     4861 tttcctgttt cagttgaaac caggccagcc cgcggacggg cttgtcgagc acgtcgctca
     4921 ttcggcggcc tgccgttcgg cttcgccgtt gccgagcagg gagtcccagc cgtcgccttt
     4981 gaggtagcgg gcgtagacat cgtagtagtt acgggcgttc tgttcgctga tctgcacgtt
     5041 gacgtcgccg ggcagcatgt cgccgcgcgt gtggttggtc agcgattgct gatagttgaa
     5101 cgggtaacgg cgggcgatcg ttccggtgct ggccttggtg gcgtacagcc agttttccat
     5161 gtcgtcctgc tcggtcattc cggcgggacc ggaatagcgc atgtagaagc ggcgcagcac
     5221 gtccttaacc tcggcggggg cgtcggcgtc gaccatgaag aagcgccatg cctcggtttc
     5281 ggtcgggctg tgcggatgcc acacgcagag gccgcgcggc tggcggccgt gataggacgt
     5341 gttcgggaac aaattgccgg tgaacggcat gatcctggcc ttgtcgccca ggcgcttttt
     5401 gcgttcgtag aagcaatgac ggaaatattc gtcgacgatg gggtattgcg cgtaggacgg
     5461 ctggtagtcg aaatcctccg gcatccagac gctgtggacg ccgtggccgg cggggtagtt
     5521 cacccagatg tgctggcctt tgttgtattc gttgtcccgc cggccggccg caccggcgcg
     5581 ggcgctgggg ccgatgccga tcatgtcgac ggaccggtgg gaggggttgt ggtaggtgtc
     5641 gccgaggaag ttctcggccg cgaacttcca gttggcg
//
LOCUS       DATAVD010000452         2679 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3205706, whole genome shotgun sequence.
ACCESSION   DATAVD010000452 DATAVD010000000
VERSION     DATAVD010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2679
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3205706"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(215..553)
                     /gene="grxD"
                     /locus_tag="VHX39_08385"
     CDS             complement(215..553)
                     /gene="grxD"
                     /locus_tag="VHX39_08385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HEX3991176.1"
                     /translation="MADPVFDRIQSDIEANQVFLYMKGTPMFPQCGFSARVVQILSHL
                     GVPFSSANVLEEQELREGVKEFSQWPTIPQLYVKGEFVGGCDIVTEMFQSGELETLLE
                     EKGVAHKAQA"
     gene            complement(596..829)
                     /locus_tag="VHX39_08390"
     CDS             complement(596..829)
                     /locus_tag="VHX39_08390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006115272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEX3991177.1"
                     /translation="MAMPANEIEALIKAALPDATVTIDDLAGDGDHYAATVVSESFRG
                     LSRVRQHQIVYAALRGRMGGALHALALQTSAPT"
     gene            complement(901..>2679)
                     /gene="purL"
                     /locus_tag="VHX39_08395"
     CDS             complement(901..>2679)
                     /gene="purL"
                     /locus_tag="VHX39_08395"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HEX3991178.1"
                     /translation="RSLVAGVVAGIGGYGNCMGIPTVGGETNFHPSYNGNCLVNAMTV
                     GIARNDRIFLSVAAGVGNPVVYVGSKTGRDGIHGATMASAQFGADSEEKRPTVQVGDP
                     FTEKLLIEACLELMATDAIVAIQDMGAAGLTSSAVEMAAKGKVGISLNLDAVPARETG
                     MSAYEFMLSESQERMLMVLRPDRQELARGIFEKWDLDFAVVGVLTDLGQLTVWHHGKL
                     EADIPLGPLNDQAPLYTRSTIEPPKREKLNPARIEDRIGLTGALRKLIGCPDLCSRAW
                     VWDQYDSAVGGQTVKRPGAADAAVVKLEGLSRGLALTTDCTPRYCFADPELGGSQAVV
                     EAWRNLTAVGSRPLAITDNMNFGNPEKPEIMGQFAAAIRGMAAACEALSFPVVSGNVS
                     LYNETGTSAILPTPVIGGLGVLDDVTKAVGIALQPWLDVVLIGATIGWLGQSLWLREV
                     AGREDGAPPPVDFTVERSNGEFVRTRILDGTIRACHDVSDGGVLVAIAEMAMASGTGC
                     RLVTHPRDVPGHAFWFGEDQARYLVAVPDSASFIRAADTAGVPAMRIGTSGGKDLTLP
                     DGGTISVDELRKLHEAFFPAWMDPPP"
BASE COUNT          502 a          892 c          805 g          480 t
ORIGIN      
        1 tcacgcgcgg ctgccgcatg gctacgttac tgacggtgaa cttccaggct ccggaatttt
       61 acgcgcgcca cggctgggag gaattcggcc gcatccaaag cgcgcctgac gtgatccgca
      121 tcttcatgcg caagacgctg gtcgcgtaat acaaacgcca acagccgtcc tgcgcggatg
      181 gccggttcac caatcaaccc gaggcggaag ccggtcaggc ctgcgcttta tgcgccacgc
      241 ccttttcctc cagtagcgtc tccagctcgc cggactggaa catttcggtc acgatatcgc
      301 aaccaccgac aaactcaccc ttcacataga gctgcgggat cgtcggccac tgcgagaatt
      361 ccttgacgcc ctcacgcagt tcctgctcct ccagcacgtt ggcggagctg aacggcacgc
      421 ccagatgcga caggatctgc accacgcgcg cggaaaaacc gcattgcggg aacatcggcg
      481 tgcccttcat gtaaaggaac acctggtttg cctcgatgtc ggactggatg cggtcgaaga
      541 cgggatcggc catggtggaa actcctcggg tatcgagcaa ggtgggtatg tcgtgtcagg
      601 tgggggctga ggtttgcagt gcaagagcat gcaacgcccc gcccatacgc ccgcgcaagg
      661 cagcatagac aatctggtgc tggcgcaccc ggctcaggcc acgaaagctt tcggagacca
      721 cggtcgccgc gtagtgatcg ccatcgcctg cgaggtcgtc gatcgtaaca gtcgcatcgg
      781 gtaacgcggc cttgatcagc gcctcaatct cgtttgccgg catcgccatc agcggcagtc
      841 tccttggtcg ggttgcaccc ttgcaatccg gtcgacttca tccggtcgtt gcccgttccg
      901 tcaaggtggg gggtccatcc aggcaggaaa gaacgcctcg tgcagtttgc gcagttcatc
      961 gaccgatatg gttccgccgt cgggcagagt caaatctttc ccgccggagg tgccgatccg
     1021 catcgccggc acacccgcag tatccgccgc ccgaatgaac gatgcgctgt ccggcacggc
     1081 gaccagatag cgcgcctggt cctcgccaaa ccagaaggca tggccgggga cgtcgcgcgg
     1141 gtgcgtgacg aggcggcagc cggtgccact ggccatcgcc atctcggcga tcgcaaccag
     1201 cacgccgccg tccgatacgt cgtgacaggc gcggatcgtg ccgtccagga tacgagttcg
     1261 cacgaactcg ccattcgaac gctccaccgt aaagtcgacc ggcgggggcg cgccatcttc
     1321 gcggccggcc acctcccgca gccatagcga ttggcccaac cagccgatgg tggcgccgat
     1381 caggaccacg tcgagccatg gctgcaatgc aatccctacc gccttggtca cgtcatccag
     1441 cacgcccaga ccgccgatca ccggggtggg caaaatcgcg ctggttccgg tctcattgta
     1501 gagcgagacg ttccccgaca cgaccgggaa ggacaaagcc tcgcaggccg ccgccatgcc
     1561 acggatcgcg gcggcgaact ggcccatgat ctcgggtttt tccgggttgc cgaaattcat
     1621 gttgtcggtg atcgcaagcg gccgtgaccc caccgcggtc aggttccgcc atgcctccac
     1681 gacggcctgg gaaccgccca gttcggggtc ggcgaaacag tagcggggcg tgcagtcggt
     1741 ggtcagcgcg aggcctcggc tcaggccttc gagtttcacc actgcggcat cggcggcgcc
     1801 gggacgtttg acggtctggc cgccgacggc actgtcgtac tggtcccaga cccaggcccg
     1861 cgaacacaga tcgggacagc ctatcagctt tcgcagtgct ccggtcaggc cgatacgatc
     1921 ctcgatccgc gccgggttca atttctcgcg tttcggcggt tcgatggtcg agcgcgtgta
     1981 gagcggggcc tgatcgttca gcgggcccaa cggaatgtca gcttcgagtt tgccgtgatg
     2041 ccagacggtc aactgtccaa ggtcggtcaa cacgccgacg acggcaaagt cgaggtccca
     2101 tttttcgaaa atgccgcgcg ccagttcctg gcgatcggga cgcagcacca tcagcatgcg
     2161 ttcctggctt tccgacagca tgaactcgta agccgacatg ccggtttcgc gcgccggcac
     2221 cgcgtcgagg ttcagcgaaa tgccgacctt gcctttcgct gccatttcga ctgcggaact
     2281 ggtcaggccg gcggcaccca tgtcctgaat ggcgacgatg gcgtcggtgg ccatcagttc
     2341 caggcacgcc tcaatcaaca gtttctcggt aaacggatcg ccgacctgca ccgtcggccg
     2401 tttctcctcc gaatccgccc caaactgcgc cgacgccatc gtcgcgccgt ggatcccgtc
     2461 gcgcccggtt ttggagccga cataaaccac cggattaccg acacccgccg ccacactgag
     2521 aaaaatccgg tcgttgcgag cgatcccgac cgtcatcgcg ttgacaaggc aattgccgtt
     2581 atagctagga tggaaattgg tctcgccgcc gacggtcgga atgcccatgc aattgccata
     2641 accgccgata cccgccacca cgcccgccac cagcgagcg
//
LOCUS       DATAVD010000453         4072 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_599771, whole genome shotgun sequence.
ACCESSION   DATAVD010000453 DATAVD010000000
VERSION     DATAVD010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4072
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_599771"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..595)
                     /locus_tag="VHX39_08400"
     CDS             complement(<1..595)
                     /locus_tag="VHX39_08400"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HEX3991179.1"
                     /translation="MPEPDRIDPRRTALIAYDVCRRALTPADPARRAVMRPVLDAWVS
                     MIAAARAAGVPVIYTTPVSRSDGADVVLLPTDLSAETGVPPLTNGIEGTPEAGFPDEI
                     APLAADYVFLKRRPSAFYGTGIAELLHMLRRDTIIIGGGATNRGVETSVREAFNMDLA
                     TIVVRECCWSGDAAAHAYSLDKAMKMYARIRRLGEVVT"
     gene            complement(612..1031)
                     /locus_tag="VHX39_08405"
     CDS             complement(612..1031)
                     /locus_tag="VHX39_08405"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3991180.1"
                     /translation="MSNPAFKFDHVHIISETPHASANWYVEMFGATIEADTVSRGAPQ
                     IFVSLGGTTILIRGRRPGEEPLPTRQIQPYADFSSHNAWGTDHFGFLYNGDLTALCDE
                     LRAMGVSLPVPLKKGVGGSLLCYVAAPDGVSIELMQC"
     gene            complement(1047..2663)
                     /locus_tag="VHX39_08410"
     CDS             complement(1047..2663)
                     /locus_tag="VHX39_08410"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3991181.1"
                     /translation="MQADYVIVGAGSAGCVLANRLTEDPTVNVILIEAGGRDRNPLIH
                     IPAGFFKMLDHDTLTWKYRSEPDPGTNGRAINYTRGKVIGGSSSINGLIYIRGQPEDY
                     DHWAQLGNRGWSWDDCLPFFRKAERWEGEGSDVRGKDGPLFTSKIDRSPICEQVVEAG
                     KQLGLEYREDVNDLPHDHADCIGWCQQTRGGRRRASAARTYLHPALKRPNLQLITNAL
                     VHRVIFEGNRAAGIAFSRGGGAVETASATRETILSAGAVGSPLILQLSGVGDPEHLGN
                     IGVPVVHGLRGVGRNMQDHYTARVSYPVVGMATANEKSRGIPLAVEVVRWALTGKGML
                     SYSPSLVAASVKVLETSATPDMQVTFAPGSFKGGQIGELEETPGLSAGAWQMRPLSRG
                     YVEARSNRPGDMPAINPRYLSDESDRRAIIGGLRFARKLFEAPALKQYVREETLPGRD
                     IQTDDELLDYARRNGGTCYHASCTCMMGTHPMSVVDSELRVHGIDGLRVIDASVMPAV
                     TSTNTNAPTIMIAEQGAAMIKQATRQKLAA"
     gene            2933..3523
                     /locus_tag="VHX39_08415"
     CDS             2933..3523
                     /locus_tag="VHX39_08415"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEX3991182.1"
                     /translation="MQRDDADGERRMFDLTTRSLHWLTAGLIALVFILVFSVDAVTSK
                     TTSETLLQLHRSFGITVWVVTIGRLVWRQFAKFPEWPTDMPRWMPLAAKGSEYALYAL
                     LLTQPILGLLYTNASGDRVNLFLLGQLPAVIGEDHALEGQLLEIHENVGDLLLALIGV
                     HVLAALFHHYWRRDETLAAMLPLVAKRRQKLRRVPP"
     gene            complement(3546..4067)
                     /locus_tag="VHX39_08420"
     CDS             complement(3546..4067)
                     /locus_tag="VHX39_08420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_273701409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(3789..3791),aa:Sec)
                     /transl_table=11
                     /product="UGSC family (seleno)protein"
                     /protein_id="HEX3991183.1"
                     /translation="MRLYDPTSSGPGRTLFRAPRLPALEGRTIGILENNKLNAVEMLR
                     EVAALFEARHGCVVRQVYSKSNASAPAPARVLAQAVDEVDFLITGLGDUGSCSTCSLH
                     DGISFEQLGKRAVVLCTEPFEVTARNIARIMGLPTYPFLMLQHPIGSCSLLELKKRAE
                     VAYRQALPILLEV"
BASE COUNT          748 a         1219 c         1300 g          805 t
ORIGIN      
        1 tcgttacgac ctcgccgagt cgccggatgc gggcgtacat tttcattgcc ttgtcgaggc
       61 tgtaggcatg cgctgccgca tcgccgctcc agcaacattc gcgcaccacg attgttgcga
      121 ggtccatgtt gaacgcctcg cgcacgctgg tctcgacccc gcgattggtg gcaccgccgc
      181 cgatgatgat ggtgtcgcgg cgcaacatgt gcagcaactc ggcgatgccg gtgccgtaaa
      241 acgcgcttgg ccggcgtttg aggaatacgt agtccgcggc aagcggtgcg atctcgtcgg
      301 ggaagccagc ttcaggcgtg ccttcgatgc cgttggtcag cggcggcaca ccggtctccg
      361 ccgaaaggtc ggttggcagc aaaacgacgt cggcgccatc ggagcgactg accggcgtgg
      421 tgtagatcac cggcacgcca gcggcccgcg cagcagcgat catcgacacc caggcatcca
      481 gcaccgggcg catgaccgca cggcgggcgg gatccgcagg agtcagcgca cgccggcaga
      541 cgtcataagc gatcagtgca gtgcggcgcg gatcgatgcg gtcgggttcg ggcatcgcaa
      601 actccagcag gtcaacattg catcaattcg atactcaccc cgtcgggcgc ggcgacatag
      661 cacagcaaac tgccgccgac gccttttttc aacggcaccg ggaggcttac gcccatggca
      721 cgcaattcgt cgcaaagtgc ggtgaggtcg ccgttgtaca ggaacccgaa atgatcagtg
      781 ccccaggcgt tatggctgga gaaatcggca tagggctgga tttggcgggt gggcagcggc
      841 tcctcacccg gccggcggcc gcgaataaga atggtcgtgc cgccaagcga aacaaagatc
      901 tgcggggcac cgcgcgacac ggtgtcggct tcgattgttg cgccgaacat ttccacgtac
      961 cagtttgccg aggcatgcgg cgtttcgctg atgatgtgca cgtggtcgaa tttgaacgcg
     1021 ggattgctca tcggttgctc actttgttac gctgccagct tttgtcttgt cgcctgtttg
     1081 atcatcgcgg caccttgttc ggcgatcatg atggtcggcg cattggtgtt ggtcgaggtg
     1141 accgcaggca tgactgaggc atcgatcacc ctcaatccat cgatgccgtg cacacgcagc
     1201 tcgctgtcga cgacgctcat cgggtgggtg cccatcatgc aggtgcaact ggcgtgatag
     1261 caggtgccgc cgttgcgccg cgcgtaatcg agcagctcgt catcggtctg aatatcgcgg
     1321 ccgggtaggg tttcctcgcg gacgtattgt ttcaatgccg gcgcttcgaa caattttcgc
     1381 gcgaaacgca ggccgccaat aatggcgcgg cgatcacttt cgtcggagag atagcgcggg
     1441 ttgatcgcag gcatgtcgcc cggccggttc gatcgcgcct cgacataacc gcgcgatagt
     1501 ggacgcattt gccaggcgcc ggcgctaaga ccaggggtct cctccagttc gccgatctgt
     1561 ccgcccttga agctgccagg ggcaaaagtg acctgcatgt cgggcgtggc ggaggtttcc
     1621 agtactttca ccgatgcggc aaccagcgag gggctgtaac tcaacatgcc cttgccggtg
     1681 agcgcccaac gcacgacttc gacagcgagc gggatgccgc gggacttttc gttggcggtg
     1741 gccatgccga cgacgggata ggaaacgcga gccgtgtagt gatcctgcat attgcggccc
     1801 acgccgcgca gtccatgcac gacggggacg ccgatgttgc caaggtgctc gggatcgccg
     1861 acgccggaca gttgcaggat cagtggcgac ccgaccgcgc cggctgagag gatggtttcc
     1921 cgggtggcgc ttgcggtttc gacagcgccg ccgccgcggg agaatgcgat gccggcggca
     1981 cggttacctt cgaagatgac gcgatgcacc agggcgttgg tgatcagttg caggttcggc
     2041 cgtttcagcg ccgggtgcag ataggtgcgg gcggcactgg cgcgacggcg gccgccacga
     2101 gtttgctggc accagccgat gcagtcggcg tggtcgtggg gcagatcgtt gacgtcctcg
     2161 cgatattcga ggcccagttg tttgccggcc tcgacgacct gttcgcagat cggtgagcgg
     2221 tcgattttcg acgtgaacag cgggccatcc ttgccgcgca cgtcgctgcc ctcgccttcc
     2281 cagcgctcgg ctttgcggaa gaacggcagg cagtcgtccc atgaccaacc acggttgccg
     2341 agctgagccc agtgatcgta gtcctcgggt tggccgcgga tgtagatgag gccgttgatg
     2401 gaggacgagc cgccgatcac cttaccgcgt gtgtaattga tggcgcggcc gttggtgccg
     2461 ggatcgggct cggagcggta tttccaggtc agcgtgtcgt ggtcgagcat cttgaagaag
     2521 ccggccggga tgtggatcag cggattgcga tcccggccgc cggcctcgat gaggatgacg
     2581 ttgaccgtgg ggtcctcggt gaggcggttg gcgaggacgc acccggcgga gccggcaccg
     2641 acgatgacgt agtctgcttg catgtccgtt ctccccgggt tgtgggtgcc ggccgtttca
     2701 tggccggttg ttggcgtacg gtattcggtc aggcgtcatg ctggaagagg gctgatcgtt
     2761 cattccgtat ccggtttcat tcaggagctt ccgcgcagca gtgtgagtgc tgatgaaatc
     2821 atccccatac ggtcccgagt gaacccgggg tcacctgaac tcccgcggga ataaatcgcc
     2881 ttgtgaccgg atcatgcgct catccgcccg atcgggcctc agggaggcat ccatgcaacg
     2941 cgatgatgca gatggtgaac gacgcatgtt tgatctgacc acaagatcgc tgcactggtt
     3001 aactgccggc ctgatcgcgc ttgtgttcat actggtcttt tcggtcgatg ccgtaacgtc
     3061 aaaaacaacg tcggagacgc ttctgcaact gcatcgatca ttcggcatca ccgtatgggt
     3121 cgtaacaatt ggcaggctgg tttggcgcca gttcgccaaa ttccccgagt ggccgaccga
     3181 catgccacga tggatgccat tggcggcaaa aggaagcgaa tacgcgctct acgcactcct
     3241 gctgacgcaa ccgatcctgg ggcttctgta caccaacgcc agcggcgatc gagtaaatct
     3301 gttcttgctt ggccaattgc cggccgtgat cggtgaggat catgcgctgg agggccaact
     3361 gctggagatc cacgagaatg tgggtgacct cttgctggca ctgatcggag tgcatgttct
     3421 ggccgcgctt ttccaccatt actggcgacg tgacgagacg cttgcagcaa tgctcccact
     3481 ggtggcaaag cggcgccaaa agctccgtcg ggtcccgccg taatgcgcct gaatatcccg
     3541 gccgcttaaa cctccaacaa gatcggcaat gcctgccgat acgccacctc tgcccgcttc
     3601 ttcagttcca gcaacgaaca actgccgatc ggatgctgca gcatcaggaa cggataggta
     3661 ggcaacccca taatccgggc gatattccga gccgtcacct cgaacggttc ggtgcacagc
     3721 accaccgccc gtttgccaag ctgttcgaaa ctgatgccgt catgcaaact gcacgtcgag
     3781 caagagcctc aatcgccaag cccggtaatc agaaaatcca cttcgtccac cgcctgggcc
     3841 agcaccctgg ccggcgccgg agcactcgcg ttcgacttcg aatacacttg acggacgacg
     3901 cagccatgcc gcgcctcgaa caaagcggcg acctcgcgca gcatttccac tgcgttcagc
     3961 ttgttgtttt ccaggatgcc gatggtcctg ccctccagcg cgggcaaccg cggcgcgcgg
     4021 aacaacgttc gtcccggacc tgaggacgtt gggtcgtata atcgcatgag tt
//
LOCUS       DATAVD010000454         3711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2833328, whole genome shotgun sequence.
ACCESSION   DATAVD010000454 DATAVD010000000
VERSION     DATAVD010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3711
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2833328"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1209)
                     /locus_tag="VHX39_08425"
     CDS             complement(<1..1209)
                     /locus_tag="VHX39_08425"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3991184.1"
                     /translation="MAMPNTANRNEMVDVLIIGSGASGAAAAWSLAETKMRILCLEQG
                     DWMKQSDFPSNGRDWEARRYADFDISPNRRGRDTDYPINEDNSAMKVANFNGVGGGTV
                     MYTAHFPRMHPSDFRVRSLDGVADDWPIDYATLEPFFAENDRMMGVSGLAGDPGVPPR
                     QPPMPPLPLGRTGERYARAMNKLGWHWWPSDSTIATTEYDGRARCINLGHCTPGCAQG
                     AKASTDITYWPHAIRAGVELRPRCRVREITVNEHGMASGAIYYDPDGVERFQPAEVVI
                     VACNGIGTPRLLLNSVSGRFPNGLANSSGLVGKNLMLHPWPQVGGYVDERVDGDHAPM
                     INLWSKEFYETDPKRDFVRGYTLQFARSGGVVSEAVDSESRRLLPWGAEHHRVMRQIF
                     HKRLRIGIACE"
     gene            complement(1290..2888)
                     /locus_tag="VHX39_08430"
     CDS             complement(1290..2888)
                     /locus_tag="VHX39_08430"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX3991185.1"
                     /translation="MNEMVDVLIIGSGASGAAVAWSLAETKMRILCLEQGDWMKQSDY
                     PSNGRDWEARLYDDFATSPNRRARPTDYPINDDNSPIKVVNFNGVGGSTIMYTGHYPR
                     LHPSDFRVRSLDGVADDWPVDYATLEPFFAENDRMTGVSGLAGDPAYPPKHSPMPPLP
                     LGRSGARFGRAMNQLGWHWWPSDTSVATTEWDGRAPCINLGHCTPACTQGAKASTDIT
                     YWPHAIRAGVELRTRCRVREITLNEHGMASGVIYYDADDVEQFQPAEVVIVACNGVGT
                     PRLLLNSVSGRFPNGLANSSGLVGRNLMFHPYAQVYGYVDEPLDSNRAPPLCLWSMEF
                     YETDLSRGFVRGYAYQFGRGIGPVTEAIFSEADGRLPWGAEHHRVFRRLAGHRIGLSA
                     ICEDLPEEHNRVTLDPVLKDGHGIPAPKVDYTISENSWRMMEHGIARAKEILAAAGAT
                     NVGVQSPILNGGWHLLGTARMGTDPERSVVNEWGRCHDVKNMFIVDGSIFVTSGGVNP
                     TCTIQALALYISDCMKQRLATLFD"
     gene            3102..>3711
                     /locus_tag="VHX39_08435"
     CDS             3102..>3711
                     /locus_tag="VHX39_08435"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3991186.1"
                     /translation="MKARLFAAAAMVGLLGVSAHAQTPIKLGAILSISGPGAAMGVGY
                     KGAVDFFPKEIAGHPVEYIVRDDATDANTGYTVAQKMISEDHIDAFIGPSLTATDAAV
                     APLANQAHVPMIAMAPYEYDPAKQPYTFSDAQPLPLMVAAVFRYMQAHGVKQIGYIGF
                     SDGWGDQVLAATKHDAETGDIKILADERYARTDTSAEAQVLKL"
BASE COUNT          698 a         1272 c         1064 g          677 t
ORIGIN      
        1 ctcgcaggcg atcccgatcc gcaggcgttt gtggaatatc tgtcgcatca cccggtgatg
       61 ctcggcgccc cagggcagca ggcggcggga ctcgctgtcg accgcctcgc tgaccacgcc
      121 accgctgcgg gcgaactgca acgtatagcc gcggacgaaa tcgcgcttcg gatcggtctc
      181 gtaaaattcc ttactccata ggttgatcat tggcgcgtgg tcgccatcca cccgttcgtc
      241 gacatagccg ccaacctgcg gccacgggtg cagcatcagg ttcttgccga ccaggccact
      301 ggaattggcc agcccgttgg gaaaccgccc agacacggaa ttcaacagca gccgcggcgt
      361 accaatgccg ttgcaggcga ctatgacaac ctcggcgggc tgaaaccgtt ccacgccgtc
      421 gggatcgtaa taaatcgccc ccgaggccat gccgtgttca ttcaccgtga tttcccgcac
      481 gcggcaacgt ggccgcagct cgacgcccgc ccggatcgca tgcggccaat aggtgatgtc
      541 agtgcttgcc ttcgccccct gcgcgcaacc cggcgtgcaa tgaccgagat tgatgcacct
      601 cgcccgcccg tcatactcgg tcgtcgctat cgtggaatcc gatggccacc agtgccaacc
      661 cagtttgttc atcgcgcgcg catatcgttc gccggtgcga ccaagcggca gtggtggcat
      721 cggcggctgt ctgggcggca cgcccggatc accggcgagg ccggagacac ccatcatgcg
      781 gtcgttctcg gcaaagaacg gctccagcgt cgcgtagtcg atcggccagt cgtcggcgac
      841 cccgtccagc gatcgcacgc gaaaatccga tggatgcatg cgcgggaaat gcgcggtgta
      901 catcaccgtc ccgccgccaa ccccattgaa gttggcgacc ttcatcgcgg agttgtcctc
      961 gttgatcggg taatcggtat cccggcctcg gcggttcgga ctgatgtcga aatcagcgta
     1021 gcggcgcgct tcccagtccc gcccgttgct cgggaagtcg gattgcttca tccagtcgcc
     1081 ctgctccaga caaagaatgc gcatcttcgt ttcggcaagg ctccaggccg ccgccgcacc
     1141 ggatgcgccg gagccaatga tcagcacgtc gaccatttcg ttgcggttcg cggtatttgg
     1201 cattgccatt taaatcacct caaatttcat ggcggtgctg tggtcccctt tgctattgcc
     1261 gaacatcgcc catgcgcgcg cgtcccccat caatcgaaca acgtcgccag ccgctgcttc
     1321 atgcagtcgg agatgtacag tgccagtgcc tggatcgtac aggttgggtt caccccaccg
     1381 gacgtgacaa aaatactgcc atcgacgatg aacatattct tcacgtcgtg gcagcggccc
     1441 cactcgttca cgaccgaccg ttccggatcc gttcccatcc tggcagtacc cagcagatgc
     1501 cagccgccat tcaaaatcgg gctttgcacg ccgacgttgg ttgcccccgc agccgccaga
     1561 atttccttcg cccgcgcgat cccgtgctcc atcatccgcc acgaattctc gctgatcgtg
     1621 taatccacct tcggcgccgg gattccgtgc ccgtccttca gcaccggatc gagtgtcacc
     1681 cggttgtgtt cctccggcag atcctcacaa attgcggaca agccaatgcg gtgtcccgcc
     1741 agccgacgaa acacccggtg atgctccgca ccccacggca gccggccgtc agcctcgctg
     1801 aaaatcgcct cggtgaccgg cccgatgccg cggccgaact gatacgcata gccgcgcacg
     1861 aacccgcgac ttaagtcggt ttcatagaac tccatgctcc aaagacaaag cggcggtgcc
     1921 cggttgctgt ccagcggttc gtcgacataa ccgtaaacct gagcgtacgg atgaaacatc
     1981 aaattccggc cgaccagccc gctggagttg gccagcccgt tggggaaccg tcccgacacc
     2041 gaattcaaca gcagcctcgg cgtgcccacg ccgttgcagg ccacgatcac cacctcagcc
     2101 ggttggaact gttccacgtc atcggcatcg taataaatca cccccgatgc catgccgtgt
     2161 tcgttcaaag tgatttcccg tacccggcaa cgcgtgcgca actccacccc ggcgcgaatg
     2221 gcgtgcggcc aataggtgat gtcggtgctc gccttggcgc cttgcgtaca ggccggcgtg
     2281 caatgaccga gattgatgca cggcgcccgc ccatcccact cggtcgtggc aactgacgta
     2341 tccgacggcc accaatgcca gcccaactgg ttcatcgcac gaccaaaccg cgccccgctg
     2401 cgacccaaag gcagcggcgg catcggcgaa tgtttcggcg gataggccgg atcgccggcc
     2461 agccccgaca cgcccgtcat gcggtcgttt tccgcgaaaa acggctccag cgtggcgtaa
     2521 tcgaccggcc agtcatcggc cacgccatcc agcgagcgaa cccggaaatc cgacggatgc
     2581 agccgcggat aatgcccggt gtacatgatc gtgctaccgc cgacgccgtt gaaattgacc
     2641 accttgatcg gcgagttgtc gtcgttgatc ggataatccg tcggccgcgc acggcgattc
     2701 gggctggtgg caaaatcgtc gtacagccgc gcttcccagt cccgtccgtt gctcggataa
     2761 tccgactgct tcatccagtc gccctgctcc aggcacagaa ttcgcatctt cgtttcggcc
     2821 aggctccacg ccaccgccgc ccccgaagcg ccggagccga tgatcagcac gtccaccatc
     2881 tcgttcattc cgccgctccc ctgggacgcc ccggaggact ctcatagcgc cctggcggcg
     2941 ctgacgtcga tcccggctca ggggcaggcg cgtgaaccgc ggttccgatg tcggtatgca
     3001 acgttaccgc ccgccgcttg acgcccatcg aaacctcgcc tgatatcgac cggcccgcgc
     3061 gcatcgcgtt tttgggtcaa tcggccaacc gggagagttg aatgaaagcg cgtctgttcg
     3121 cggccgccgc gatggtggga ttgctcggcg tatcggcgca cgcccaaacg ccgatcaaac
     3181 tgggcgccat cctgtcgatc agcgggccag gtgcggcgat gggcgtcggc tacaaaggcg
     3241 cggtcgactt cttcccgaag gagatcgccg gccatccggt cgaatacatc gtgcgcgacg
     3301 acgccaccga tgccaacact ggctacaccg tcgcgcaaaa gatgatttcc gaagatcaca
     3361 tcgacgcttt tatcggaccg tcgctgaccg ccacggacgc tgcggtggcg ccgctcgcca
     3421 accaggcgca cgtgccgatg atcgccatgg cgccgtacga atacgatccg gcgaagcagc
     3481 cttatacgtt cagtgacgca cagcctttgc cgctgatggt cgccgcggtg ttccggtaca
     3541 tgcaggcgca cggcgtgaag cagatcggct acatcggctt cagcgacggc tggggcgatc
     3601 aggtgctggc tgccacgaag cacgatgcag aaaccggcga catcaagatc ctcgccgacg
     3661 agcgatatgc ccgcaccgac acctcggccg aagcccaggt gttgaagctg a
//
LOCUS       DATAVD010000455         1504 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1530804, whole genome shotgun sequence.
ACCESSION   DATAVD010000455 DATAVD010000000
VERSION     DATAVD010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1530804"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..460)
                     /locus_tag="VHX39_08440"
     CDS             complement(<1..460)
                     /locus_tag="VHX39_08440"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3991187.1"
                     /translation="MNEAIRPGPDSLPQAAAALQLSVVIPTFNERDNVTVLYRRLEAT
                     LAGVSWEAIFVDDNSPDGTWDVVRSLARQDTRVRCIRRIGRRGLSGACIEGILASSAP
                     CAAVMDADLQHDETQLPKMLALLQGGDLDLVVGSRYVEGGNADSFNRQRAG"
     gene            complement(821..1171)
                     /locus_tag="VHX39_08445"
     CDS             complement(821..1171)
                     /locus_tag="VHX39_08445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991188.1"
                     /translation="MIVAAAAVFTTSAAIADEIGDAHRTALVGRDSYWNCLAQEYSLP
                     GNKTMSNADFTSHIADVCPSERQNFRVSLVDFLSLQFPSADAGDHMTTANKAIALAQK
                     DIVTAFINHKAAQK"
BASE COUNT          303 a          479 c          448 g          274 t
ORIGIN      
        1 cccctgcccg ctgccggttg aaactgtcgg cgttgccgcc ctcgacgtag cggctgccga
       61 cgacgaggtc gaggtcgcca ccttgcaaca gcgccagcat cttcggcagt tgggtctcgt
      121 catgctggag gtcggcatcc atcacggccg cgcacggcgc gctcgaggcc agaatgccct
      181 cgatgcaggc gccggacagg ccacggcggc cgatccgccg gatacagcgc acgcgggtgt
      241 cctgccgcgc gaggctccgc accacgtccc aggtgccatc aggggaattg tcgtcaacaa
      301 agatggcttc ccagctcacc ccggccagcg tcgcttccag ccgccggtac agcaccgtga
      361 cgttgtcgcg ttcgttgaac gtcgggatga cgaccgaaag ctggagcgcg gcagccgcct
      421 gcggcagcga atcagggccc ggtctgatgg cttcattcat gccgccagcg tatatccgca
      481 gcccctcgcg atgccaaggc gcgccacggc acggcacgtg caaaacgggg gcaaaggaag
      541 gcggaatagg ccaaaaacag ccccagaaat gccaacgacc acgaacagag ggcgcgcgta
      601 catccggcgc agccgagcca ttcagtggtc gtcccagcgc cggtgcgatt aagcatcaac
      661 gtcgccgtta ggacctaaat ggggtcgata tcggtgttcc gcaagggggg gtgcccattt
      721 tttccctgga cccgggaaag gctccagcgg cagagcgcgt ccaactccat ctccgccagc
      781 tccaatcgcc tcaccgtcat tgcatccgcc attgcgtcgg ctatttctgg gcagccttgt
      841 gattgataaa ggccgtgacg atgtctttct gagccagcgc gatcgccttg ttggcggtcg
      901 tcatgtgatc gcccgcatcg gcgctcggaa attgcagcga gaggaaatcg accagcgaga
      961 cccggaaatt ctgccgctcg gacgggcaga catcggcaat gtggctggta aaatccgcat
     1021 tggacatcgt cttgttgcca ggaagcgaat attcctgggc gaggcagttc cagtaggaat
     1081 cgcgtccgac cagcgccgtc cggtgagcat caccgatctc gtcggctatc gcggccgaag
     1141 tggtgaacac cgccgcggcg gcaacaatca acggtattcc gcgcattcca attctccact
     1201 ttttcgccat tctagcgtga acaccacatg cgcgtaaggt gtcgcaagcc ggtttcattt
     1261 gcactcacgg gaacctgaag actgatctta ccaacatttc atccccgcac ggctggttct
     1321 cgatcggcca ctccctacct tagcggcagg aggaagccat gaagcaatct gatcacttcc
     1381 gcgataacgc tgagaactgt cagcgtctgg cggaacgggc gtctgatcat ccgacttatc
     1441 tccgctacaa acgtatggaa gatgcctggc gctcgctggc caacgaacag gattggctcg
     1501 acgg
//
LOCUS       DATAVD010000456         2263 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1531222, whole genome shotgun sequence.
ACCESSION   DATAVD010000456 DATAVD010000000
VERSION     DATAVD010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2263
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1531222"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            197..1285
                     /locus_tag="VHX39_08450"
     CDS             197..1285
                     /locus_tag="VHX39_08450"
                     /EC_number="1.1.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009027 - tartrate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0046395 - carboxylic acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tartrate dehydrogenase"
                     /protein_id="HEX3991189.1"
                     /translation="MAKQYRIASVPADGIGPEVISAGLEVLDAVASRDGGFSLVIDHY
                     DWGSNWYRKHGEFMPADGLAWLRTADAIYFGAVGDPNIPDHVSLWGLRLQICQGLDQY
                     ANVRPTRILQGVTSPLRNVSPGDLDWVIVRENSEGEYSGHGGRVHRGLPEEVATETAI
                     FTRRGVERIMRAAFDIARARPRKHLTVVTKSNAQRHGMVFWDEIAGLVSHDYKDVTWD
                     KELVDAMTMRMVLRSRTIDTVVATNLHADILSDLAAALAGSLGIAPTANLDPERRNPS
                     MFEPIHGSAFDITGKGIANPVASFWTAAMMLEHLGETPAADLLMRAVEQVCAAGILSP
                     DLGGTATTKEVTKAVVEAVRGMNRAGAG"
     gene            1696..2160
                     /locus_tag="VHX39_08455"
     CDS             1696..2160
                     /locus_tag="VHX39_08455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991190.1"
                     /translation="MDDINPVQNLADKQKQGEAIPAVGLEWSVGPLLNAQADLLAGAE
                     ATVTDWLHRRHEAVADTQQLISRMQTGVDPAAAFKAQQEWMSRSFRRLVADADACHSA
                     TQQLMERASSWFPRNGWMWFGNGSGNGEAAASQAAATRTAGRSLRMANNKPE"
BASE COUNT          449 a          668 c          695 g          451 t
ORIGIN      
        1 gccctccccg gcgctgaccc ggccaaacag gcgcgcagtg ggatcgacga aggcaggccg
       61 gtcgagtttc acctcggggc caaattcgaa ggacatggac gaacctcgat ctcaggacag
      121 acgtcagcct gacggacttc acgtccccgg tccatggtgt atgaacgggg cccgtccaga
      181 tcaggatcct gcgaccatgg ccaaacagta tcgcatcgcc tccgttcccg ccgacggcat
      241 cggccccgag gtgatcagcg cgggcctcga ggtgctggat gccgtcgcgt cgcgcgatgg
      301 cgggttctcg ctggtgatcg atcattacga ctgggggtcg aactggtatc gcaagcacgg
      361 cgagttcatg ccggcggacg gattggcctg gctgcgcacc gctgacgcga tttacttcgg
      421 cgcggtcggc gatccgaaca tcccggacca tgtctcgcta tggggcctac ggctgcaaat
      481 ctgccaggga ctggatcaat acgccaacgt gcggcccacc cggatcctgc aaggggtgac
      541 ctcgccactg cgcaatgtca gcccagggga tctcgattgg gtaatcgtgc gggaaaactc
      601 cgaaggcgag tattccggcc atggcggccg cgtccatcgc gggctgccgg aagaggttgc
      661 caccgaaacc gctattttta cccgtcgcgg tgtggaacgg atcatgcggg cggccttcga
      721 catcgcgcgc gctcgccctc gcaagcacct gacggtcgtg accaaatcca acgcgcaacg
      781 ccacggcatg gtgttctggg atgagatcgc gggcctggtg tcgcacgact ataaggatgt
      841 aacctgggac aaagagctgg tggacgcgat gaccatgcgc atggtgctgc ggtcgcgcac
      901 catcgacacc gtggtggcca ccaacctgca cgccgatatt ttgtccgatc tcgccgccgc
      961 actggccggt tcactcggca ttgcgccaac cgccaatctc gatcccgagc gccgcaaccc
     1021 gtcgatgttc gagccaatcc acggctcggc gttcgacatt accggcaaag gcatcgctaa
     1081 cccggtcgcc agtttctgga ccgccgccat gatgctcgag catctgggtg agacacccgc
     1141 cgccgacctc ctgatgcgag cggttgagca agtttgtgca gccggcattc tatcacccga
     1201 tctgggcggt acagcgacga cgaaagaagt gacgaaggcc gttgtggagg cagttcgtgg
     1261 gatgaaccgc gcgggcgccg gttaatattt tttattccga tttggagtca taatattcaa
     1321 acgctccatg gccggcgtaa ccgccagcgt ggcgtgattt cagcattaat gtcacgtcat
     1381 ccaaaaactg aaaatctcca ctatgtattt gatagttggc gatatttctt ggtgttcatc
     1441 gccttaaccc ggctgattat gacagtttac cagatttagt ttcgtaccat tgtatctctt
     1501 ccacctggat gttaaggaaa aattgtcaaa gcacgagcgg acgagtgctc ccgttggagc
     1561 ttgctcccgg aagcagatcg tagccctcga ccaatgtcgg ctgccggcac gcggggggaa
     1621 atgtgtgcgt gcataatgct gaggtgaggc acaactcctc agttcataca ccatcgaccg
     1681 cggaggagag taagcatgga cgacatcaat ccggttcaaa acctggccga taagcaaaag
     1741 caaggcgagg ccattccagc ggttggcctc gaatggagtg tcggaccgtt gctgaatgcc
     1801 caggccgatt tgttggctgg tgccgaagcg acggtgacgg actggctgca ccggcgccat
     1861 gaagctgtcg cggacacgca gcagttgatt tcccgcatgc agacgggcgt cgatccggcc
     1921 gctgccttta aggcgcagca ggagtggatg tcccgttcat tccgccgcct ggttgccgat
     1981 gccgatgctt gccattccgc aactcagcaa ttgatggaac gtgcgtcatc gtggttcccc
     2041 cgcaacggct ggatgtggtt tggcaacggt tccgggaacg gggaggcggc cgcgtcgcaa
     2101 gctgccgcca ctcgcacggc aggcaggtca ttgcgtatgg ctaataacaa gccggaatag
     2161 cattaccggc cggattcttt tctgtgcgcc ggcgcgcagt gatgccggcg gctgttggtt
     2221 tgcgtgcgtg atctgacgcc gcgaccaacg ccgcgataaa ctt
//
LOCUS       DATAVD010000457         2577 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1344577, whole genome shotgun sequence.
ACCESSION   DATAVD010000457 DATAVD010000000
VERSION     DATAVD010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2577
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1344577"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2073)
                     /locus_tag="VHX39_08460"
     CDS             complement(<1..2073)
                     /locus_tag="VHX39_08460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX3991191.1"
                     /translation="MPLHVALTHRTSYQYDRLVQPGPQTIRLRPAPHARTPILSYELK
                     VEPQPHFLNWQQDPQGNHLARVVFPERVTHFDVTVDLVADMVTINPFDFFLEPDAETW
                     PFVYDRALDNELAPFLKADPAGPALTALLATIPREPKHTVTMLTELNQRIQKQIEYVV
                     RMEPGVQPPDDTLTTGRGSCRDSGWLMVQLLRHLGFAARFVSGYLIQLAPDIRPLEGP
                     QGPLSDFTDLHAWAEVYLPGAGWIGLDATSGLLCGEGHIPLAASPDPTSAAPISGFVE
                     KCETTFAVEMTIRRILETPRVTRPYTEVQWQAILDKGAAVDRSLARGDVRLTMGGEPT
                     FVSATDLDSPEWNTDATGPTKRAYADRLLRRLMARWTSGAALQYVMGKQYPGEQLPRW
                     AFHCLWRADGEPVWRDPALFAPEHETDNATPAEAADFAGRLAERLQIDPSLVIPAHED
                     VHYYLWREHRLPANVLAEDAKLLDAMERDRLARVFGQGLQNPVGSVLPLRRVLDNGSR
                     RWRSGSWFFRAGEMFLVPGDSPIGLRLPLDSIPWADGETIEQQFEPDHFAPRDRLPPR
                     QAFVHRRLTDAERDSGIEGFRPVAQALPVIGQGEPGLVRTALAVEPRDGKMHVFLPPL
                     FAVEDWLDLLAAIEETAEETHRRIVLEGYLPPSDERLTTFSVTPDPGVIEVNVHPVRT
                     WSDQVTQTE"
     gene            2343..>2577
                     /locus_tag="VHX39_08465"
     CDS             2343..>2577
                     /locus_tag="VHX39_08465"
                     /inference="COORDINATES: protein motif:HMM:NF024908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3991192.1"
                     /translation="MARQRRQYTRKFKLMALSRELGIRRELLYRWHDLYIGGGEAALR
                     DSGRPRRILAVSSGSGADIAAMPAPPVVDDLGRA"
BASE COUNT          469 a          737 c          923 g          448 t
ORIGIN      
        1 ctcggtctgc gtgacctggt cggaccaggt tcgcaccggg tgaacgttga cctcgatgac
       61 gccggggtcg ggggtgacgg agaaggtggt cagccgttca tccgagggcg gcaaatagcc
      121 ttcgagcaca atacggcggt gggtttcttc ggcggtttcc tcgatggcgg cgagcaggtc
      181 cagccagtcc tcgacggcaa acaacggcgg caggaagacg tgcatcttgc cgtcacgagg
      241 ctcaaccgcc agcgcggtgc gcacgagccc aggttcgccc tggccgatga ccgggagggc
      301 ctgtgcgacc gggcggaaac cttcgatgcc gctgtctcgc tcggcgtcgg tgaggcgccg
      361 gtgcacgaag gcctggcgcg gcggcaaccg gtcgcgtggg gcgaaatggt caggttcgaa
      421 ctgttgttcg atcgtttcgc catcagccca gggaatgctg tccagtggaa gccgcagacc
      481 aatgggggaa tcgccgggaa ccagaaacat ttcgccggca cggaagaacc agctgccgga
      541 tcgccaacgg cgcgacccat tatccagcac gcgacgcaac ggcagcacac tgccgaccgg
      601 attctgcagt ccctggccga acacgcgggc caatcggtcg cgctccatcg catcgagcaa
      661 tttcgcatcc tcggccagca cgttggcggg caggcggtgt tcgcgccaga ggtagtaatg
      721 cacgtcttca tgcgccggga tgacgaggct cggatcgatt tgcaaacgtt ctgccagacg
      781 gccggcgaaa tcggcggctt cggccggggt tgcgttgtcg gtttcgtgct ccggcgcgaa
      841 cagggcagga tcgcgccaca ccggttctcc gtcggcgcgc catagacagt gaaaagccca
      901 gcggggcagc tgctcgccgg gatattgctt gcccataacg tattgcaggg cggccccgga
      961 ggtccaacgc gccatcaacc ggcgcagcag gcggtcggcg taggctcgct tggtggggcc
     1021 ggtggcatcg gtgttccact ccggcgagtc gaggtcggtg gccgagacga aggttggctc
     1081 gccgcccatg gtcagccgaa cgtcgccgcg ggccagcgag cggtccaccg cggcgccttt
     1141 gtccaaaatc gcctgccact ggacttcggt atagggcctg gtgacgcgcg gcgtttccag
     1201 gatgcgccgg atggtcattt cgactgcgaa cgtggtttcg cacttttcca cgaaaccgct
     1261 gatcggcgcg gcggatgtcg gatcgggact cgcggcgagc gggatgtgac cctcgccgca
     1321 caacaggccc gaggtggcat ccaggccgat ccagccggcg ccgggcaggt aaacttcagc
     1381 ccatgcgtgg aggtcggtga agtcggacag cgggccttgc gggccctcga gcgggcggat
     1441 gtcgggtgcg agttggatca ggtagccgga cacgaagcga gccgcgaatc ccaggtgacg
     1501 cagcagttgc accatgagcc agccggaatc ccggcaggac ccgcggccgg ttgtcagcgt
     1561 gtcgtccggc ggttgcacgc ccggctccat gcgaacaacg tattcgattt gcttttgaat
     1621 gcgctggttc agttccgtca gcatggtgac ggtgtgcttg ggttcgcgcg gaatggtggc
     1681 cagcagggcg gtcagggccg gaccggcggg atcggctttc aggaacggtg caagttcgtt
     1741 gtccagggcg cggtcataga caaatggcca ggtctcggcg tcgggttcga ggaagaagtc
     1801 gaacggattg atggttacca tgtccgcaac gagatcgacg gtgacgtcga aatgcgtgac
     1861 ccgttcgggg aacaccacac gggcgaggtg attgccctgc ggatcctgct gccaattgag
     1921 gaaatgcggc tgcggttcga ccttcagttc gtacgacagg atcggtgtac gggcatgggg
     1981 cgcaggccgt agccgaatgg tctgcgggcc gggctggacg aggcgatcgt actggtacga
     2041 cgtgcgatgg gtaagggcga cgtgcagggg catttatggc tcgggaacaa gagggacgcc
     2101 gcgtgatgtt gcgccgcaca atggggataa gcaagcggcg tttgacaagg gccgggccgc
     2161 cgttcagagc atgttcaggc tgaccggaaa tctttcgcgc cgtctggtgt gccgtcagaa
     2221 ttccgctgtc atcgcaggcg accagcaaag cttaatcaca gagccacaga gccatgtgcg
     2281 aggtggagtg aacccctgat atgcgacacg gaaattaggc acactgttca ggaggcagaa
     2341 cagtggcacg gcaacgacga cagtacacac gtaagttcaa gctaatggcg ttgtcgcggg
     2401 aactcgggat tcggcgggaa ctgctgtacc gctggcatga cctatatatt ggtggcgggg
     2461 aggccgctct gcgcgacagc ggacggccgc gccggatttt ggcagtgtca tcggggtccg
     2521 gagcggacat cgcggcgatg ccggcaccgc cggtggtgga tgatctgggc cgggctc
//
LOCUS       DATAVD010000458         6952 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1344578, whole genome shotgun sequence.
ACCESSION   DATAVD010000458 DATAVD010000000
VERSION     DATAVD010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6952
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1344578"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..476
                     /locus_tag="VHX39_08470"
     CDS             <1..476
                     /locus_tag="VHX39_08470"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3991193.1"
                     /translation="RSSHFSLAPVQTFPTADGWIFIMCMTQKFWLNLVEAMGRRDLAE
                     NPSFTTPAARWENRQALSDLLDAEFRTHGTEHWLGRLSGLLPVGPVYDIQQALESPFV
                     AATGMVRDAPHPGNPAMRVLANPLRINGERPAAPLCTPLGAGNASLLPVAAGVAP"
     gene            473..1612
                     /locus_tag="VHX39_08475"
     CDS             473..1612
                     /locus_tag="VHX39_08475"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3991194.1"
                     /translation="MKLTGLRVVDLSAFLPGPYMTLAMADHGAEVIKIEPPGGEHGRK
                     IGERDGDETVFFRNLNRGKKSVVIDLKTQSGRDALLALSDTADVFVESFRPGVADRLG
                     VGYETIRTRNPGIVYCSISAFGQHGAYAARPAHDLATEAMSGVLSVTLGNDDAPAIPG
                     APVADVLSGLQGLSAVLMALLRRATTGVGDRIDISMHDAMVGACLNVLGPAIAEDRQQ
                     VAKHERTTGGAAFYRLYRTADGRHLALAGQEEKFVRTLLQALERPDLIPLCLQGPGPH
                     QAPVMAFLEQVFLEKSLAGWLTWLEGRDLCYGPVLTFPEMLRDPHLQARGMVLTDAAG
                     HRHIGPPIAFANEPARPVFDAPALGQHTALLVPDAAKSSQRQEKA"
     gene            1612..2130
                     /locus_tag="VHX39_08480"
     CDS             1612..2130
                     /locus_tag="VHX39_08480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014200021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX3991195.1"
                     /translation="MVATMKPVGGNRLRESHGRYFEDFEVGVIYEHRPGRTISEADNT
                     WFTLLTMNQHPLHFDVEYARKSEFGKPLVNSCLTLSIVVGMTVSDISQKAIGNLGWTD
                     IKLTAPVFAGDTLYAESEVLAKRESASRPTQGIVTVRTIGKKQDGTVFISFERSVLVP
                     KQGYAVDDMADY"
     gene            2306..2959
                     /locus_tag="VHX39_08485"
     CDS             2306..2959
                     /locus_tag="VHX39_08485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012226654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEX3991196.1"
                     /translation="MAAIFRPTANIAAQVVVVGLGMLIVGGAVWWWAWPRMDYVRHMG
                     WTVEQPVPFSHQHHVAGLGIDCRFCHVTVETAANAGLPPTYTCMTCHSQIWTNAALLA
                     PVRESLANNTPIVWHRVTDLPDYVYFNHKIHIAKGVGCQSCHGTIQDMALTRKARTLT
                     MGFCLDCHRDPAPNLRPADAIFNTDWHRTAETPSPAALMQHYHVGGRNLTDCSICHR"
     gene            2947..5793
                     /locus_tag="VHX39_08490"
     CDS             2947..5793
                     /locus_tag="VHX39_08490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012226652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAT-variant-translocated molybdopterin
                     oxidoreductase"
                     /protein_id="HEX3991197.1"
                     /translation="MPPVNRQWRGLDRLARDPAFVARASAEFPQLAAALAEPRDRRSV
                     LKLMAAGLALAGLSGCDDGAPGGVLIPPVLPADNTVAAGSRMFATASVLGGYADGILV
                     RHVNGRPIKVEGNPLHPASLGGTSAIGQAEILGFYDPDRSRGLIRDGEPQSWSSLLTT
                     LAAQRDALGQGAGFRILTSAVTSPTFSRQIAALKQRYPEMRWHRWDPVCRDSMRAGAV
                     LAYGQPVEILPQLDAVDLLVTIDSDLLDSAPGHLRFARDFAARRNPARTDRMSRSYAI
                     EPTPSLTGVAADHRFVVSPRDLVRIVPALAASILRGETPAGMPSWFAPLAAEMQAAHG
                     RAFIHAGPQQPAEIHALVHAMNEALGGRGATYTLIGPVEADPVDQAASMRDLMADMQT
                     GHVTSLLIIDSNPVFTLPGFGEALKRVPFSMTLAAETTETGGQTHWTLPARHPFEDWS
                     DARAYDGTVTILQPQAKPLYDGLSPHALLALFQAADQVDSRDVVRQTHGLTDGQWHDA
                     LATGVVPNTRAAVSDARLKSGAAQALPPRPAGGEVTLLFRPDPHLWDGRFANNAWLQE
                     LPRPLTKLTWDNPLLVSPAIAKRLGLANGDRVSVAVGDASVVLPAWVMPGQAADCAVA
                     LLGFGRTDVGMVGQGAGYDVYPLTGGGGPVTLRKGTGREVLACTEHHDPIFTDAGDYV
                     RQGTLAAFKANPGFLGGPAEQPSLYNRKPTGPAAWGMSIDLNACIGCNACVVACTAEN
                     NIPTVVKQQVIHEREMHWLRIDRYHEGDPADPNILFQPVMCQHCEQAPCEIVCPVGAT
                     VHDQEGLNVMVYNRCVGTRFCSNNCPYKVRRFNYFDFAGEERRPAVARNPDVTVRARG
                     VMEKCTFCLQRIAEARIDADMANRPIGADEVKTACQSACPAQAITFGNMAQGGDIAER
                     KKSPLTYTLLDDQGTRPRVTYEARIFNVGSDTGT"
     gene            5790..>6952
                     /gene="nrfD"
                     /locus_tag="VHX39_08495"
     CDS             5790..>6952
                     /gene="nrfD"
                     /locus_tag="VHX39_08495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010509566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEX3991198.1"
                     /translation="MNAIEPVTLPGSNNPDMTDHVSAIALRSKAFLWWWIAVAPAALL
                     TSILVGSILYLFYAGVGIWGIDWPVAWGFAIISYVWWIAIASGGTFISALFFLTRSEW
                     RNSINRIAESMTLFGAACAGIYPILHLGRPWFFYWLFPYPNSMGLWPQFRSPLLWDFF
                     AILTYVTASVLFWYLGLLPDLATLRDRAPTRTKQVVYGAMALGFRGTSGQWRHYHALY
                     GVLAAIMAPLVCSVHSIVGLDFAGAATVGWHSTMFPPFFIFGAFLSGFATVLLLIMPL
                     RRLLRLQRYITTRHVEVLGRLLLTSSLFVGYAYIMDAFTTYYGGEKAEITMFQEKLFG
                     YYAGIYWATILFNVLLPQLLWFRTIRLNQLVVGLISVGVIVGMWCERYTIVVVS"
BASE COUNT         1182 a         2256 c         2239 g         1275 t
ORIGIN      
        1 agcgcagttc gcatttctcg ttggcgccgg tgcagacatt ccccaccgcc gacggctgga
       61 tcttcatcat gtgcatgacc cagaagttct ggctcaacct ggtcgaggcg atgggccggc
      121 gagacctggc ggaaaatcca agcttcacca ccccggcggc gcgctgggag aaccggcagg
      181 cgctgagcga cctgctggac gcggaattcc gaacccatgg caccgaacac tggctggggc
      241 gtctgtcggg cctgctgccg gtcgggccgg tgtacgacat ccagcaggcg ctcgagagcc
      301 cgttcgttgc cgccacggga atggtccgcg atgcgccgca ccccggcaat ccggccatgc
      361 gcgtgctggc caatccgctg cgcatcaacg gcgagcgccc ggcggcacca ctctgcacgc
      421 cgctcggcgc cggcaacgcg tccctgctgc ctgtcgcagc cggcgtcgca ccgtgaagct
      481 caccggcctg cgggtcgttg acctcagcgc ttttctgccc ggcccttata tgacgctcgc
      541 catggccgat catggcgcgg aggttatcaa gatcgagccg cccggcggcg agcacggccg
      601 caagatcggc gagcgcgacg gcgacgaaac cgtgttcttc cgcaacctca atcgcggcaa
      661 gaagagtgtc gttatcgatc tcaagaccca gtccggccgc gacgcgctgc tggccctgag
      721 cgacaccgcg gacgtctttg tcgagagctt ccgccctggc gtggcggatc gtctcggggt
      781 tggctacgag acgatccgaa cccgcaatcc cggcatcgtc tactgctcga tcagtgcgtt
      841 tggacagcac ggcgcctatg ccgcccgccc ggcccacgac ctggctaccg aagcaatgag
      901 cggcgtgctc agtgtcaccc tcggcaacga cgacgcgccc gccatcccgg gtgcgcctgt
      961 cgcggacgtg ctgtcgggcc tgcaagggct gtcggcggtg ctgatggcgc tgctgcggcg
     1021 agcgacgacc ggcgttgggg accgtatcga catctcgatg cacgacgcca tggtcggcgc
     1081 ctgcctgaac gtgctcggcc cggccatcgc ggaagaccgt caacaggtcg cgaaacatga
     1141 gcgcaccacc ggcggcgcgg cgttctatcg cctgtatcgc acggccgatg ggcgccatct
     1201 ggcgcttgcc ggacaggagg aaaagttcgt ccgcacgctg ctgcaggcgc tggagcggcc
     1261 ggatctgatt cccctgtgcc tgcaagggcc gggcccgcac caggcaccgg tgatggcgtt
     1321 cctggagcag gtcttcctgg aaaagagcct cgccggctgg ctgacctggc tggagggccg
     1381 cgacctctgc tacggacctg tcctgacgtt cccggagatg ctgagggacc cacatctcca
     1441 ggcccgcggc atggtgctga ccgatgcggc cggacaccgc catatcgggc cgcccattgc
     1501 cttcgcaaac gaaccggcac ggccggtatt cgacgcgccc gcgctgggtc aacacacggc
     1561 gctgctggtg ccggacgcgg cgaagtcatc acaacggcag gagaaagcgt gatggtcgcg
     1621 acaatgaaac cagtcggcgg caaccggttg cgtgaaagtc acggccgcta ctttgaggat
     1681 ttcgaagtcg gggtgatcta cgagcaccgc cccggccgca ccatttcgga ggcggacaac
     1741 acctggttca ccctgctgac catgaaccag catccgctgc atttcgacgt ggaatacgcc
     1801 cgcaaatcgg aattcgggaa gccattggtc aatagctgcc tgaccctttc catcgtggtt
     1861 ggcatgaccg tcagcgacat cagccagaag gcgatcggca acctgggctg gaccgacatc
     1921 aagctgaccg ctcccgtctt cgcgggcgac acgctgtatg cggaatcgga agtgctggcg
     1981 aagcgagagt ccgcgtcccg tcccacccag ggtatcgtga ccgttcgcac gatcggcaag
     2041 aaacaagacg gcacggtctt catcagcttt gagcgttcag tgctggtgcc caagcagggt
     2101 tacgccgtgg atgatatggc ggattactga tccccaaggg cgtgcgtgac ccacctgtcg
     2161 cgactcggga ctcccttcgc acgatggggc cggtgacttc gagccgccgg aagcggccgc
     2221 gtcacgttag cgtgcgcccc gaaacttcca agcgaaacgg ccgtttggcg tccgggactc
     2281 gtttccgcac gtagaaggca tcgcgatggc agccatcttc cggcccacgg cgaatatcgc
     2341 ggcgcaggtc gtcgtggtcg ggctgggtat gctgatcgtg ggcggagcgg tctggtggtg
     2401 ggcgtggccg cgcatggatt acgtgcggca catgggttgg acagtggagc agccggtgcc
     2461 tttcagccat cagcaccatg tcgccggcct cgggatagac tgccgcttct gtcatgtaac
     2521 ggttgagaca gcggcaaatg cgggcttgcc gccgacttat acgtgcatga cctgccattc
     2581 ccagatatgg accaatgccg ccctgttggc gccggtgcgg gaaagtctgg cgaacaacac
     2641 gccgatcgtc tggcaccggg taaccgatct tccggactac gtctacttca atcacaagat
     2701 ccatatcgcc aagggtgtgg gctgccagag ttgccatggc accatccagg acatggcgct
     2761 gacgcggaag gcacgcaccc tgacaatggg tttctgtctg gactgccatc gcgatcccgc
     2821 gccgaacctg cggccggccg atgcgatttt caacaccgat tggcatcgaa cggccgagac
     2881 gccgtctcct gccgcgctga tgcagcacta ccatgtgggt ggccgcaacc tgacggattg
     2941 ctcgatatgc caccggtaaa ccgccaatgg cgcggactgg accggttggc ccgcgacccc
     3001 gcgttcgttg cccgggcgtc ggcggagttt ccgcaactgg ccgccgcctt ggcggagccg
     3061 cgcgaccgcc gcagtgtgct gaagctgatg gctgccggtc tcgccttggc cggcctgtcc
     3121 ggatgcgatg acggcgctcc tggcggtgtg ctgatcccgc cggtgctgcc ggccgacaac
     3181 actgtcgccg ccggcagccg gatgttcgcc accgccagcg tgttgggcgg ctatgccgac
     3241 ggcatcctgg tccgccatgt caatggccgt ccgatcaagg tggaaggcaa tccgctgcac
     3301 ccggccagcc tgggcggaac cagcgcgatc gggcaggcgg aaatcctcgg cttttacgat
     3361 cccgaccgta gccgcgggtt gatccgggat ggcgagccac agtcctggtc ctcactgctg
     3421 acgaccctcg ccgcgcaacg cgatgcgctg ggccaaggcg cgggatttcg cattttgacc
     3481 agtgccgtca cgtcgcccac cttctctcgg caaatcgccg cgctgaagca acgttatccg
     3541 gagatgcggt ggcaccgctg ggacccggtc tgccgcgact ccatgcgcgc gggtgcggtg
     3601 ctggcatatg ggcagccggt ggagatcctg ccgcaactgg atgcggttga tcttctcgtc
     3661 acgatcgaca gcgacctgct ggattccgcg cccggtcacc tccgcttcgc ccgcgatttc
     3721 gccgctcggc gcaatccggc acgaacggac cgcatgagcc gctcttacgc gatcgaaccg
     3781 acgccgtctt tgaccggcgt cgccgcggat catcgtttcg tcgtaagtcc acgcgatctg
     3841 gtccggattg ttccggctct ggcggcgtcg atcctgcgcg gcgaaacgcc ggcgggcatg
     3901 ccgagctggt tcgcgccgct cgccgcggag atgcaggcgg cccacggccg ggcgttcatc
     3961 catgccgggc cgcaacagcc ggccgagatc catgcacttg tgcatgcgat gaacgaggcc
     4021 ctgggcggtc gcggcgcgac ctacacgctg atcggtccag tggaagccga tccggtggat
     4081 caggcagcgt cgatgcgcga cctgatggcg gatatgcaga ccggacacgt gacttccctg
     4141 ttgatcatag acagcaaccc cgtcttcacc ctgcccggct tcggtgaggc gctgaaacgc
     4201 gtgccgtttt ccatgacgct ggccgctgaa acgaccgaaa ccggtggtca gacgcactgg
     4261 accctgcccg cccgccatcc gttcgaggac tggagcgacg cccgcgccta tgacggaacg
     4321 gttacgatcc tgcagccgca ggcaaagcct ctctacgacg gactcagccc gcatgccctg
     4381 ctggcgctgt tccaggccgc tgatcaagtc gatagccggg atgtcgtgcg gcagacgcac
     4441 gggctgacgg atggccaatg gcatgatgcc ctggcgacag gtgtcgttcc gaatacccga
     4501 gcggcggtca gtgacgcccg gctgaagtca ggggccgcgc aggcgcttcc gccccggccg
     4561 gcaggaggcg aggtcacact gctgttccgg ccggacccgc atctgtggga cggtcgtttc
     4621 gccaacaacg cctggctgca ggaattgccg aggcccctga ccaagctgac ctgggataat
     4681 ccgctgctgg tgtcgccggc gatcgcaaaa cgactggggc tggcaaacgg cgatcgtgtg
     4741 tcggtcgcgg tcggcgatgc cagcgtcgta ctgccggcct gggtcatgcc agggcaggcc
     4801 gctgattgcg ccgtggctct gctgggattc ggacgaaccg atgtcggcat ggtcggccag
     4861 ggcgccggct atgacgtcta tccgctgacc ggcggcggtg gacccgtcac gctgcgcaag
     4921 gggacggggc gggaggtgct ggcctgcacc gaacatcacg atcccatctt caccgacgcc
     4981 ggcgactatg tgcgccaggg caccttggcg gcattcaagg ccaatccagg cttcctcggc
     5041 gggccggcgg aacaacccag cctgtacaac cgcaagccga ccggccccgc cgcctggggc
     5101 atgagcatcg acctgaatgc ctgcatcggc tgcaacgcct gcgtcgtcgc ctgcacggcg
     5161 gagaacaaca tccccactgt cgtcaagcag caggtgatcc atgagcgaga aatgcactgg
     5221 ctgcgtatcg accgctacca cgagggcgat ccagccgatc cgaacatcct gttccagccg
     5281 gtgatgtgcc agcattgcga gcaggcacca tgcgagatcg tctgcccggt cggtgccacc
     5341 gtgcatgacc aggaaggtct gaacgtgatg gtgtacaacc gctgcgtcgg cacacggttt
     5401 tgcagcaaca actgtcccta caaggtgcgt cgcttcaatt atttcgactt tgccggggaa
     5461 gagcgccgtc ccgccgtggc tcgcaacccg gatgtgacgg tgcgggcgcg cggtgtgatg
     5521 gaaaaatgca cattttgcct gcaacggatt gccgaggccc gtatcgacgc ggacatggcg
     5581 aaccggccga tcggtgccga tgaggtcaag accgcgtgcc agtccgcatg ccctgcccag
     5641 gcgatcacgt tcggcaacat ggcacagggc ggtgacatcg ccgaacgcaa gaaaagcccg
     5701 ctgacctata cgctgctcga cgaccaaggc acccggccgc gtgtcaccta cgaagccagg
     5761 atattcaacg ttggttcgga taccggcaca tgaacgccat cgaacccgtc acacttcccg
     5821 gcagcaacaa tcccgacatg acggaccacg tgtccgccat agccttgcgg agcaaggcgt
     5881 tcctctggtg gtggatcgcg gtcgctccgg cggcgctgct gaccagtatc ttggtcggat
     5941 cgatcctgta tctgttctat gccggggtcg gcatctgggg gatcgattgg ccggtcgcct
     6001 ggggattcgc gatcatcagc tatgtctggt ggatcgcgat agccagcggc ggcacattca
     6061 tttcggcgtt gttcttcctg acccgatcgg agtggcgcaa ttccatcaac cgtatcgccg
     6121 aatcaatgac gctgttcggt gccgcctgcg ccggcattta tccaatattg catcttggcc
     6181 gcccgtggtt cttctactgg ttgttcccat accccaacag catgggcctg tggccgcagt
     6241 tccgcagccc gcttctatgg gatttcttcg caatcctgac ctatgtgacg gcctcggtgc
     6301 tattctggta ccttggcctg ctgcccgacc tggcaacgct gcgggaccga gcgccgacgc
     6361 ggacgaagca ggttgtttat ggggcgatgg cgctgggttt ccgcggcacc agtgggcagt
     6421 ggcggcatta ccatgcgctg tatggcgtgc tggccgcgat catggcgccg ctggtctgct
     6481 cggtgcacag catcgtcggg ctggacttcg ccggcgcggc caccgtcggc tggcattcga
     6541 cgatgtttcc gccgttcttc atcttcggcg ctttcctgtc aggctttgcc actgtcctgc
     6601 tgttgatcat gccgttgcga cgcctgctgc ggttgcagcg ctatatcacc acgcggcacg
     6661 tggaggtgct gggacgcttg ctactgacca gtagcctgtt cgtcggatac gcctacatca
     6721 tggacgcctt caccacctat tacggtggcg agaaggccga aatcacgatg tttcaggaga
     6781 aactgttcgg ctactacgcc ggcatctact gggcaacgat cctgttcaac gtactgctgc
     6841 cgcagcttct gtggttccga acgatccggc tgaatcaact ggtggtcgga ttgatctccg
     6901 tgggcgtgat cgtcggcatg tggtgtgagc gttatacgat cgtcgttgtc tc
//
LOCUS       DATAVD010000459         5698 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_789378, whole genome shotgun sequence.
ACCESSION   DATAVD010000459 DATAVD010000000
VERSION     DATAVD010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5698
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_789378"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VHX39_08500"
     CDS             <1..651
                     /locus_tag="VHX39_08500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991199.1"
                     /translation="VVRKSMEKSRDSRYSSAQDMADALRLPISEAPLANSPQSEAETI
                     AASHRSVVGPAMPEPIDDATQKRIERRLAFYIGPIARHVMRAAVRNAQSIDALCEAVS
                     LHIDPIAEREQFLSETLPAERRGLETTPAPPPVPGPLPTHGESTNITPEQIDRAERAL
                     ASILGPIAKMMVRRALPDAGSEADLWERLANHIEDASDRGEFLRHKARQPPRKTGR"
     gene            751..2397
                     /locus_tag="VHX39_08505"
     CDS             751..2397
                     /locus_tag="VHX39_08505"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3991200.1"
                     /translation="MVKSRRMSGLGHEQTDGSGMGPPTLGRRALGAMMVAALAAPHLV
                     HAAETSTFVSAFGLPANLDPHQVFDVPMQAVILNAYDGLYRYQNDPPELVPWLAESHT
                     VSEDGLVWEFTLRSGVKFHDGSDLTAEDVVYSFQRVLGLKLAPAGAFLPILSPDRITA
                     PSPLVVRFELKTPYAPFFAAIPIVAIVNPRLVRAHETNGDWAKSWLAQNGAGSGAYKI
                     IAESYRPLEQLDMDINENHFLGWAHNPNPVQRIASRPVRETSTRVLALLNGTIDCTDT
                     NLPADQVDRINASKVAYVQKDTVMRIFIIRMNNTRPPFNNLNARLAFAHAFDYDGFIK
                     DILGGYATRDPYPMPDTLWGIPKDVKGYDYDVAKAKEYVTKALAEGAPMHRPVEIHVQ
                     SENEQSVQAAQLFQAGLGEAGINAKVVGDTWENLTANAKSAETTPDMWIHWISTYFVD
                     PENWVGQMYDSQFHGTWKASCWYKNPDVDTLLRKARMTLKQEDRATLYQQAIRQIVAD
                     SPDVWVYNSMQLQGLNKRVKGRRFCTVGQGSEMRTVSLDA"
     gene            2410..3420
                     /locus_tag="VHX39_08510"
     CDS             2410..3420
                     /locus_tag="VHX39_08510"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3991201.1"
                     /translation="MIRFILRRCVLALPSLFGLLVVTFFLAHAVSADPSAALAGDAAT
                     PEQIARLRHEAGLDRPVWEQFITYSGKVIRFDFGESAFSRRPVARDIAERLPATLTLT
                     IAALGFSILVGVPLGVFAALSHNEWPDYVLRLFSVLGVAVAAFWFAIMLQLLFSMRLE
                     WLPLRGELSDTISRPARVTGFLLVDCLITGKWEVFRDALAHLILPAFTLSLGALSSIV
                     RFTRAGVLDTLQHDFVFYERAVGYRRSRLIWRYILRNSVTATITQIGLLFGALIAGGV
                     VVEAIFDWPGIGSYTVQAILTGDRQVMLAVTLLVGVIYTVVNILTDVAHGLVDPRVLD
                     TA"
     gene            3417..4259
                     /locus_tag="VHX39_08515"
     CDS             3417..4259
                     /locus_tag="VHX39_08515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3991202.1"
                     /translation="MNPFLRKLSHDVPAMIGLAIVIAVLCLAVLGPWLAPFPGDAAAS
                     HLARRLKPPTMTYPFGTDNLGRDIFSRVILGARGALLVALTVVSLALAIGVPLGLIAG
                     YRGGWLSETIMRTTDAVLAIPQLVLALALAQLLTPSLESAMLALSLTYWPFFTRIVYA
                     ETRRLTSAVFIDALRGIGAGGGRILFLHVLPNVISPVIVRATIGLGFTILVAAVLGFL
                     GMGATPPAPDWGLAISESREYLPTAWWYATFPGLAILLTVMGFNLLGDGLRDLVDPRL
                     RRSR"
     gene            4256..5233
                     /locus_tag="VHX39_08520"
     CDS             4256..5233
                     /locus_tag="VHX39_08520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3991203.1"
                     /translation="MIPILSVRDLRVSIRTDEGIASILDNVNLTVETGRILGVVGESG
                     CGKSTLIRAIMGILPRGARVDNGTIMFEGENLLVFSESELNTRIRSSRIGFIPQDPLL
                     ALNPVFKVGTQLLEIMRDHALDDGNRGAARKRAHVSRLVWLLRRMQVPDPELALERYP
                     HQFSGGQRQRLLIAAALACNPALVIADEPTTALDVTTQHQILLLLRELVGEFNLSMLF
                     VTHDFGVVAELCDDLCVIYAGQSVEAGAVEPILAAPGHPYTKLLLDCHPERAAAFHGI
                     PGAVPSPLSPPTGCRFAPRCPDVRPCCSAGVPPERPANSGAVVRCVQFA"
     gene            5230..>5698
                     /locus_tag="VHX39_08525"
     CDS             5230..>5698
                     /locus_tag="VHX39_08525"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3991204.1"
                     /translation="MTAMVPILSLRSISVWLGRRRALLRRNAAPIRAVNDVSLDIYPG
                     EILALVGESGCGKTTLGRTILGLQRETSGEIRLDGVKVSGQDQRRTRVGRRAIQYVHQ
                     DAAAALDPWWSIGRTLREGLQIHGVRDPAERSGRVEAMLTAVGLDPSAARRYPH"
BASE COUNT          999 a         1744 c         1761 g         1194 t
ORIGIN      
        1 gtcgtgcgca agtcgatgga aaaatcccgc gacagccggt acagttctgc ccaggatatg
       61 gctgatgcgc tgcggttgcc gattagtgaa gccccattgg cgaattcacc gcagtcggaa
      121 gccgaaacca tagctgcgag ccaccgatcg gtggtggggc cggccatgcc ggaaccaatt
      181 gatgatgcca ctcagaaaag gattgagcgc cggctggcat tttacatcgg gcctattgca
      241 cgtcatgtga tgcgcgcggc agtacgcaat gcacaatcga tcgatgcatt gtgtgaagcg
      301 gtgtctctgc acattgaccc gattgctgaa cgggagcaat tcctgagcga aactttgccc
      361 gctgaacgtc gcggcctgga aacgacaccc gcgccgccgc cagtacccgg cccgcttccg
      421 acacatggtg aaagtacgaa tatcactccc gagcagattg accgcgcgga acgcgcgctg
      481 gcaagcatac ttggcccaat cgccaagatg atggtccggc gcgcgttgcc ggacgccgga
      541 tcggaggccg atttgtggga gcgattggcg aaccatattg aagatgcatc cgatcgaggc
      601 gagttcctga ggcacaaagc aaggcaaccg cctcggaaga cgggtcgttg aactgacctt
      661 tccgctccgt ggtcgcctgg gaaaacctga cgccggttct ggcaccaatt ttgcttgcca
      721 tactacgacc tcaggcccgg agttgattgc atggtcaaat cacgccgcat gagtggcctc
      781 ggccacgagc aaacggatgg gagcggaatg ggcccgccga cgcttggcag gcgcgctctc
      841 ggtgcgatga tggtggccgc gctggctgcc cctcacttgg tccatgcggc ggaaacctcg
      901 acgttcgtca gcgcgtttgg gctgccggcc aatctggacc cgcatcaggt tttcgatgtc
      961 ccgatgcaag ccgtgatcct gaatgcctat gacgggcttt accgatatca gaatgacccg
     1021 cctgaactgg tgccctggct cgccgaaagc cacaccgttt cggaggacgg tctggtctgg
     1081 gaattcaccc tacgcagcgg cgtgaaattt catgacggca gcgatctgac agccgaagat
     1141 gtcgtctata gttttcagcg ggtactcggc cttaagctgg cgcctgccgg ggccttcctg
     1201 ccgattctgt cgccggatcg gatcaccgcg ccatcgccgc tggtcgtgcg cttcgaactc
     1261 aaaacgccgt acgcgccgtt cttcgccgcc atcccgattg tcgccatcgt caaccccagg
     1321 ctcgtccgcg cccacgaaac caacggcgac tgggccaaat catggttggc gcaaaacggt
     1381 gccggatccg gcgcctacaa gatcattgcg gagagttacc ggccactcga acagctcgac
     1441 atggacatca acgagaacca cttcctcggt tgggcccata acccgaaccc ggtgcagcgg
     1501 atcgcatcac ggccggtgcg ggagacctcg acgcgcgtgc tggcattgct gaatgggacg
     1561 atcgactgca ccgacaccaa tttgccggcc gaccaggtgg accggatcaa cgcgtcgaaa
     1621 gtcgcttacg tgcaaaaaga taccgtcatg cggatattca tcatccgcat gaacaacacc
     1681 aggccgccgt tcaacaacct gaacgcgagg ctcgcgttcg cgcatgcctt cgactacgac
     1741 ggctttatca aagacatact gggtggatac gcgacccgcg atccctaccc gatgcccgat
     1801 accctgtggg gtatcccgaa ggacgtcaaa ggttatgact acgatgtcgc caaagcaaag
     1861 gagtacgtga ccaaggcgct cgccgagggc gcgccgatgc atcgcccagt ggagattcac
     1921 gtacagtcgg aaaacgaaca gagcgtgcag gcggctcagt tgtttcaggc gggcctgggg
     1981 gaggccggga taaacgcaaa ggttgtgggt gatacctggg aaaacctgac cgccaatgca
     2041 aagtcggcag agaccacacc ggacatgtgg atccattgga tcagcaccta tttcgtcgat
     2101 cccgagaact gggtcggcca gatgtacgac agccagttcc acggcacctg gaaggcgtcg
     2161 tgctggtaca agaacccgga tgtcgataca ctgttgcgca aggcgcgcat gacgctgaaa
     2221 caagaggacc gcgcgacgct gtatcaacag gcgatccgcc agatcgtggc cgatagtccc
     2281 gatgtctggg tgtataattc gatgcaactt caggggctga acaagcgggt caaaggccgg
     2341 cgcttctgca cggttggcca aggctcggag atgcggaccg tttcactcga cgcctgatcg
     2401 gcagcgcgca tgatccgttt catcctccgc cgctgcgttc tggcgttgcc gtcactgttt
     2461 ggcttgctgg tcgttacttt tttcctggcc catgcagtgt cggccgaccc ctcagccgct
     2521 ctggccggag acgccgcgac cccggaacag attgcccgcc tgcggcatga agccggtctc
     2581 gatcggccgg tctgggagca gttcatcacc tattcaggca aggtcatccg tttcgatttc
     2641 ggtgagagtg cgttttcccg ccgcccggtt gcgcgtgaca ttgccgagcg attgcccgcg
     2701 acgctgacgt tgaccatcgc cgctctcggc ttttcgatcc tggtgggtgt tcctctcggc
     2761 gtgttcgcgg cgctgagcca taacgagtgg ccggattacg tgctgcgtct gttttccgtc
     2821 cttggggtcg ctgtcgcggc gttttggttc gccattatgt tgcaattact gttctccatg
     2881 cggcttgagt ggctgccgtt gcgtggcgag ttgagcgaca cgatctcccg tcccgcccgc
     2941 gtcaccggat tcctgctggt cgattgtctg atcaccggaa agtgggaggt gttccgcgac
     3001 gctctcgcac acctgatcct gccggcgttc acgctgtctc tgggcgcgct gtccagcatt
     3061 gttcggttca cccgagccgg cgtgcttgac acgctgcaac acgatttcgt gttttatgag
     3121 cgcgcggtgg gctatcggcg atcccgtctg atctggcgtt atatcctgcg caactcggtc
     3181 accgccacga tcacccagat cggcttgctg ttcggcgcgc tgatcgccgg cggcgtggtg
     3241 gtcgaggcaa ttttcgattg gccgggcatc ggtagttaca ccgtgcaggc gatcttgact
     3301 ggcgatcgcc aggtgatgct cgcggtaacg ttgctggtcg gcgtgatcta cacggtcgtg
     3361 aacattctga ccgatgttgc gcacggcctt gtcgatccac gtgtgctgga cacggcatga
     3421 acccattttt gcgcaagctg tcgcacgacg tgccggcaat gatcggcctc gcaatcgtta
     3481 ttgcggtttt gtgtctcgcg gtactgggcc cctggctggc gccgtttccc ggcgatgccg
     3541 cggcatcgca tctcgcacgc cggttgaagc caccgacgat gacctatccg ttcggcaccg
     3601 ataatctcgg ccgagacatt ttttcgcgcg ttatcctggg tgcgcgcgga gcgctgctgg
     3661 tcgctctcac ggtggtttcg ctggccctgg caattggcgt gcctctgggc ctgatcgcgg
     3721 gttatcgagg tggctggcta tccgaaacga tcatgcggac gaccgatgcc gtgctggcga
     3781 ttccgcaact cgtgctggca ttggcgctgg cgcagttgct gacgccgtcc ttggaaagcg
     3841 caatgctggc actgtcgctg acctactggc cgtttttcac ccgcatcgtc tatgctgaga
     3901 cgcggcgtct gacgtccgca gtgttcattg acgcattgcg cgggattggc gccggtggtg
     3961 ggcgcatcct gttcctccat gttctgccga acgtgatctc gccggttatc gttcgggcca
     4021 cgatcggcct cggttttacc atcctggtcg cggccgtact gggctttctc gggatgggtg
     4081 cgacaccgcc ggccccggac tggggcctcg cgatctccga aagccgagag tacctgccga
     4141 ccgcctggtg gtatgccacg tttcccggcc tcgcgatcct gctcaccgtc atgggcttca
     4201 atctactggg cgacggattg cgcgatcttg ttgaccctcg gctacggcgc tcccgatgat
     4261 tccgattttg tcggtccgcg atctgagggt ttcgatccgc acggatgagg gcatcgcttc
     4321 gatcctggac aatgtgaatt tgaccgtgga aaccggccgc atcctcggtg tcgtcggcga
     4381 gtcaggctgc ggcaagtcca cgttgatccg cgccatcatg ggtatcctgc cgcgcggcgc
     4441 ccgggtcgat aacggaacaa ttatgtttga gggcgagaac ctgttggtgt tctccgagtc
     4501 cgaactcaac acccgtatcc gcagcagccg catcggcttc attccgcagg acccgctgct
     4561 ggcactgaac ccggtgttca aagtcggcac gcaattgctc gagatcatgc gcgaccatgc
     4621 cctcgatgac ggcaatcgcg gtgccgcgcg gaaacgtgcg catgtcagcc ggctggtctg
     4681 gctgctgcgc cgcatgcagg tgccggatcc ggagctcgcg ctggaacgct atccgcatca
     4741 gttttccggc ggtcagcggc aacgcctgtt gatcgccgcc gccctggcct gcaacccggc
     4801 actggtgatc gcggatgagc cgaccaccgc gctggatgtc accacgcaac accaaatact
     4861 gctgttgctg cgtgaactgg tcggcgagtt caacctgtcc atgttgttcg tcacgcacga
     4921 cttcggcgtg gtcgccgaac tgtgcgacga tctgtgcgtg atctacgcgg gacaatcggt
     4981 cgaggctggc gcagtcgaac cgatcctcgc cgcaccggga catccctata cgaaactgct
     5041 gctcgactgc catccggaac gtgcggctgc gtttcacggc atcccgggcg cggtgccgtc
     5101 gccattgtca ccgccgaccg gttgccgctt tgcgccacgt tgccccgacg tccggccgtg
     5161 ctgctctgct ggcgtgccgc ccgagcgtcc ggcaaactca ggcgcggtcg tccgttgcgt
     5221 gcaattcgca tgacggcaat ggtgccgatc ctgtcgttgc ggtcgatatc tgtttggctt
     5281 ggccgcaggc gcgcattgct tcgccgcaac gccgcaccga ttcgcgcagt gaacgatgtc
     5341 agcctggata tttatcctgg ggaaatcctt gctttggtcg gcgagtcagg ctgtggcaaa
     5401 accacgcttg gccgcaccat tcttggcctg cagcgggaga cctcgggcga aatccgtctc
     5461 gatggtgtga aggtcagcgg tcaggatcag cggcggactc gcgtgggccg gcgggcgatc
     5521 caatatgtcc accaggatgc ggccgcagcc ttggatccct ggtggagcat cggccgcacg
     5581 ttgcgggaag ggctgcagat ccatggtgtc cgagacccgg ccgagagatc tggccgtgtc
     5641 gaggcaatgt taaccgcggt tggactggat ccttctgccg cgcgccgcta tccgcacg
//
LOCUS       DATAVD010000460         2709 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3393180, whole genome shotgun sequence.
ACCESSION   DATAVD010000460 DATAVD010000000
VERSION     DATAVD010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2709
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3393180"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(350..721)
                     /locus_tag="VHX39_08530"
     CDS             complement(350..721)
                     /locus_tag="VHX39_08530"
                     /inference="COORDINATES: protein motif:HMM:NF018942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX3991205.1"
                     /translation="MPWVILLSRVLMAAIFIQSGYGKATHPSATMGMLEHYNLPLPGL
                     AYAVSLLVEVGAGIAFLLGWKGQAAALILAIWSVATAFVAHYHPGDTGQMINFMKNLC
                     MAGGFLQVAVYGPGAFSLDRK"
     gene            complement(729..1151)
                     /gene="ndk"
                     /locus_tag="VHX39_08535"
     CDS             complement(729..1151)
                     /gene="ndk"
                     /locus_tag="VHX39_08535"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEX3991206.1"
                     /translation="MPTERTLSIIKPDGTRRNLTGKINACLEAAGLRIVAQKRLQLTQ
                     TQAEAFYAVHKERPFYRDLVNFMTSGPVVAQVLEGDNAVMRNRDVMGATDPKKAAAGT
                     IRAEFAENIEANSVHGSDSAENAATEIAFFFAGIEIPG"
     gene            1310..1768
                     /locus_tag="VHX39_08540"
     CDS             1310..1768
                     /locus_tag="VHX39_08540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HEX3991207.1"
                     /translation="MIAFLHRVSAWLPGSLRNHASEARIRVLVQFFMFGMVGLVGFVI
                     DTGTVYALRHSVGLYLAGLAAYFTAATGTWFCNRFWTFRHIGRSDPWHVQWRRFLAAN
                     FSGFIINRGVYALLVTFVAAAAREPVLAVFAGAMAGLTLNFNLSRKLVFR"
     gene            1887..2648
                     /locus_tag="VHX39_08545"
     CDS             1887..2648
                     /locus_tag="VHX39_08545"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEX3991208.1"
                     /translation="MENKPGDDLTLDVPFADEDRTFDGLGLSKGEVPLYSYAWHPRLV
                     LLPTWQLDTRARLTKRLVDLGLALSALLVFALPALLLMLAIRLDSPGPALYRQRRVGQ
                     FGKTFVALKFRSMVHNPDADGMICQATSHDARVTRIGRWMRRYSVDELPQLINVLRNE
                     MSIVGPRPHAPGTRAGKQLFEDVAQSYNTRHFVKPGLTGLAQVRGWRGETDTEEKLLH
                     RIDCDFEYIAHWSIRLDLAIIWRTACSVLRMNNAY"
BASE COUNT          507 a          819 c          796 g          587 t
ORIGIN      
        1 ggatatgtgc aatacggcgc gacccagatc ggctcgatca gttgcatcca tccaactcag
       61 gtgctgcaac tgtggcaagg cagtgggacc ccaccagtac cggcgttgca tgaaccgccg
      121 gagcccagcg cgccaaaaag gaagtaggcc tgcggctact cacggtgtcc ggcatatcct
      181 gacggccggc cgaatgttta attcccggtc acgccattta attccgatat atcaacgaat
      241 gaccagcgga cccccggttg catcacgaag acgctgccgg tcccggccat ccggcagggg
      301 caacggcgta gctttgcgct ccagtttgac ccttgccagt acaggccgcc tattttcggt
      361 cgaggctgaa cgcgcccggg ccgtacaccg caacctgcag gaaccctccc gccatacaca
      421 aattcttcat gaagttgatc atctggccgg tatcccccgg atgataatgc gcgacgaacg
      481 cggtcgcgac agaccagatc gccaaaatta aggctgccgc ctgtcccttc cagcccaaca
      541 ggaacgcgat cccggcgccg acctccacca gcagcgaaac cgcgtacgca agccccggca
      601 gcggtaggtt gtagtgctcc aacatcccca tcgtcgccga cggatgggtc gctttgccgt
      661 aaccgctctg tatgaaaatc gccgccatca acacacggct cagcaggata acccagggca
      721 tggccgcctc agccggggat ttcgatacca gcgaaaaaga acgcgatctc ggtcgcggcg
      781 ttctccgcgc tgtccgagcc atgtaccgag ttcgcctcga tattttccgc gaactctgca
      841 cgaatggtgc cggcagcggc cttcttcggg tccgtcgcgc ccatcacgtc gcgattgcgc
      901 atgaccgcgt tatcgccctc cagcacctgc gcgacgaccg gcccggaggt catgaagttc
      961 accagatcgc gatagaatgg gcgctccttg tgcaccgcat agaacgcctc ggcctgggtt
     1021 tgggtcagtt gcaggcgctt ctgtgcaacg atgcgcagac cggctgcctc cagacaggcg
     1081 ttgatcttgc ctgtcaggtt ccgccgtgtc ccatcgggct tgatgatgga gagggtacgc
     1141 tcggtcggca tggtcgctcc tttggggatc ccgcatctgt gggggaatgt gtgctggcgc
     1201 ggcgtgtaga cgtatcagca ggaggtcggc aagggcaggg tcggcagcgg ccggaaaccc
     1261 tctgccgtgt tttgttgccg aacttgcccc cgacgtttaa tcgacgcgca tgatcgcgtt
     1321 cctgcaccga gtgtcggcct ggctaccggg ttcgttgcgc aaccatgcgt cggaagcacg
     1381 cattcgcgtg ctggtgcagt tcttcatgtt cggcatggtt ggactggtcg gtttcgtgat
     1441 cgacaccggg accgtgtatg ccttgcgcca ttccgtaggc ttatatctcg ccggcctcgc
     1501 cgcctatttt accgccgcga ccgggacgtg gttttgcaac cgcttctgga cctttcgcca
     1561 catcggcagg tccgacccgt ggcacgtgca atggcggcgc ttcctggctg ccaatttcag
     1621 tggcttcatc atcaatcgcg gcgtttacgc tttgctggtg acgttcgttg cagctgccgc
     1681 gcgcgagccc gtgcttgcgg tgtttgcggg cgccatggct gggctgacgt tgaacttcaa
     1741 tctgtcgcgg aagctggtgt tccgctgagc atcgggttca tcgtttgttc tgaaattgca
     1801 agcgttgctg aaaaataaac gacccgacgc gtacatcggc atttatcatt aatacttcgt
     1861 tcatcaattc aggttgagat acgcgcatgg aaaacaaacc aggcgacgat ctcacgctgg
     1921 atgttccgtt cgctgacgag gaccggacat tcgacggact tggtctctcg aagggtgagg
     1981 ttccgcttta ttcctatgcc tggcatccca ggctggtgtt actgccgacc tggcaactcg
     2041 atacgagagc gcgactgacc aaacgtctgg tcgatcttgg tctggcgctg tcggcgttgc
     2101 ttgtgtttgc cctgcccgcg ctgttgctga tgcttgcgat aaggctggac agcccaggac
     2161 cggctttgta ccggcaacgg cgggttggtc agtttggcaa gacattcgtc gcgctgaaat
     2221 ttcgttccat ggtgcacaat ccggacgccg acggaatgat ctgtcaggcc accagccacg
     2281 atgctcgcgt cacgcgcatc ggacgttgga tgcggcgcta ttcggtggac gagttgccgc
     2341 aactgatcaa cgttctgcga aatgaaatgt cgatcgtggg acctcggccc catgcgcccg
     2401 gcacacgggc cggcaaacag ttgtttgagg atgtggctca atcctacaac acccgccact
     2461 tcgttaagcc cggcctcact gggcttgcgc aagtacgcgg ttggcgcggt gagaccgaca
     2521 ctgaggaaaa attgctgcat cggatcgatt gcgacttcga atatatcgcc cattggtcga
     2581 tccggctcga tctggcgatc atctggcgca cggcgtgttc ggtgttgcgc atgaacaacg
     2641 cgtattgatc aggatgcgac gaatgtccgc gacaatcgag cggcccattg ccccaatcat
     2701 cgaccatct
//
LOCUS       DATAVD010000461         4714 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1159336, whole genome shotgun sequence.
ACCESSION   DATAVD010000461 DATAVD010000000
VERSION     DATAVD010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4714
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1159336"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            217..293
                     /locus_tag="VHX39_08550"
     tRNA            217..293
                     /locus_tag="VHX39_08550"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:251..253,aa:Met,seq:cat)
     gene            747..2512
                     /locus_tag="VHX39_08555"
                     /pseudo
     CDS             747..2512
                     /locus_tag="VHX39_08555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611810.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1634 family transposase"
     gene            complement(2707..3531)
                     /locus_tag="VHX39_08560"
     CDS             complement(2707..3531)
                     /locus_tag="VHX39_08560"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3991209.1"
                     /translation="MIRVDAHHHVWRLDRGDYGWITPDMAIHRDYGLDDLRPLLDDID
                     ATVLVQAAPTEAETDYLLEVARGSHGLVKAVVGWIDLAAPDAAARINQRAKDPLIKGL
                     RPMLQDIADSYWIFRDDVKPALHAMAETGLRLDALIQPRHLPLMQIFANLHPKLKIVI
                     DHAAKPPIASRNMEPWAADLARLAGDSNVFCKLSGLATEAGPEWQMNDVRPWVEHIVE
                     CFGASRIMWGSDWPVIELATPYQRWHTITKRFLYRYDLPEQDEIMCDTAVRFYGLK"
     gene            3915..4364
                     /locus_tag="VHX39_08565"
     CDS             3915..4364
                     /locus_tag="VHX39_08565"
                     /inference="COORDINATES: protein motif:HMM:TIGR00413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEX3991210.1"
                     /translation="MLIAPSTQQRGPKNVWKYMLLSLLCLDACASPGATSNVPEQAAL
                     KAEPTIPTKTIEGRASFYGGEREGKLTSSGKVFNSSLMTAAHPTLPFGTTVLVTNLQN
                     SRSCNVEITDRGPARWTHRVIDVSEGAARCLEMIRSGVVPVTLQFAG"
     gene            complement(4562..>4714)
                     /locus_tag="VHX39_08570"
     CDS             complement(4562..>4714)
                     /locus_tag="VHX39_08570"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3991211.1"
                     /translation="TPEAEAALMKAQCLKEKVYPQDLARMVLWLASDDSRMCTAQMWV
                     VDGGRL"
BASE COUNT          977 a         1435 c         1436 g          866 t
ORIGIN      
        1 ccttcccgaa ctcggccgtg aaaaccccca gcgcccatgg tactgtgtct caaggcacgg
       61 gagagtaggt cgccgccagg tcttccagtc catgcaacag ccaacaattg ccgcgggtca
      121 cgccaaagga ccggtccagg cgccggaagg cctccgactt ccggcaacgc aatatcgatc
      181 gaggccgtaa cctgcgaccc gatcaccgat catcaacgcg gggtggagca gcccggtagc
      241 tcgtcaggct cataacctga aggtcacagg ttcaaatcct gtccccgcaa ccacctttac
      301 cgaacgcgcg aacaaagcgt gatcgacggc ggaaatcggc cgtgaaaccg ggcgatcgtc
      361 cggcaggcca aatcgaacca tcgtaagcat ccggcaagtg acgcggcgtg actgctcagg
      421 cggcgactgc ggattccgat tgagcgtcgc gccagttcca cggcagcagt tcgtggaaac
      481 gctgtaagcg tcgcggcgcg cccacatggt atcggtgcgt aaacgtccgg tcagccccgc
      541 cttgttccac ccgccggtga tcccgagact atgaccttaa ggagcaccta aaggtcggag
      601 ttagcccaac ttcgccgatt caaccccgga tttcgaaatc tgcgcgcaaa actcgcagtc
      661 cctgacacga gccgctcccg gaatcggctg tagtgaagac ctaccctgtt ccagacggtg
      721 tccgatgtgg atagtcagtg gtcgtcatgt ttctgcgcgc gacgattcgc tggaaggacg
      781 gcaagctgca ccgctactgg agcgtggtgg aaagccgtcg cgtggcgggc aaacgcgtgg
      841 tgcagcgccc gctgctgtat cttggcgaga tcaacgacag ccagagggcg tcatggcgca
      901 agtcgatagc tgtgctggag gacggcgccg ccgagcctcg aaccttgtcg ctgttcccgg
      961 acgatcgtgc ggaaggtctg ctgcccgatg actcaatcgt ccgtttgcgg ttgtcggaac
     1021 tcagcctgcg ccggcctcgg caatgggggg cctgctggct cgccttgcat ttatgggaag
     1081 aactgcgcct cgatcagttc tggctgccgc gtctgccggc cagccgcaaa ggcacgcgct
     1141 gggatcaggt gctgttcgta ctggccgcgt atcggctgat cgcgccaggc agcgagtggc
     1201 ggctgtatcg gcaatggttc gccgacacgg cactgggcga tctgctgggc accagcgccg
     1261 atctcgcgga gatccataag ctctatgcct gccatgatcg tctgctggcc cacaaggacg
     1321 cgctgttcca gcatttacaa caacgttggc gtgacctgtt caacgccgac ttcgacgtac
     1381 tgctctacga tctgaccagc acctacttcg aagccaaccc gccgttcccc gaaggcgaca
     1441 agcgccgctt cggctattcg cgcgatcacc ggccggattg cgtgcaggtg gtgatcgcgt
     1501 tggtggtgac gccggacggt ctgccgatgg cgtatgaagt tctcgccggc aacaccaacg
     1561 acagccggac tttgcgcgac tttctggctc ggatcgagcg gctgtacggc aaagcccgcc
     1621 gcatctggct gatggatcgc ggcattccaa ccgaggccgt gctggaggaa atgcgagcct
     1681 ccgatccgcc agtgcaatat ctggttggca cgcccaaagg ccgattgaca cgattgcaac
     1741 agcgtcttct gcaactgccc tggcaacagg cccgtcccgg tgtgcaggtg aaactgctct
     1801 ccgaggacga cgaactttat gtcttcgccg agagcgaggc gcgcgtcgcc aaggaacggg
     1861 cgatgcgcca acgccaactt aaatggctgt gggcgcgtct gaagcaactc gccgaaatgg
     1921 atctcagccg tgaggaactg ctgatgcgcc tcggcgccgc gcgccgagcg gatggcgtct
     1981 ggtcgtggtc aaggtcgccg acaaaggcgc gagcttcacg ttccaattgg accgcgcgaa
     2041 gctgcgccgt acccgcttgc gtgaaggtcg ctatctgctg cgcaccaatc tgccgaagga
     2101 cgacccggcg aagctgtggg actattatat ccggctggtc gaggtggagc aggcgttcaa
     2161 gaccctcaag ggcgacctgg ccatccgtcc ggtgttccat cagaccgagg cccggatcga
     2221 ggcacatatc tttattgcct ttctggcgtt cagcctgcac gcgacgttgc gtcagcggct
     2281 gcgcgcgttc gccccgggtc tgacgccacg cgccgtgctg gacgacttcg ccgcggtgca
     2341 aatgatcgat gtgcacgtgc cgacgaccga cgggcgggaa ctgacgctga cgcgatatac
     2401 cgagccggag cgtgcgttac gcctgctgat cgacacgctg aagctgcaac tcccggctca
     2461 gtcgtcgccc aggatcaccg ccggtcccgc acagccgcca acgacgatgt agtgaagaca
     2521 tttgggggtg cgcgccagga gcgtcaacgg gttagcgcgc gctcaaatcg cgaatccgcg
     2581 aagttgggtt aagcgagctg ctgagcgcga gtgaacgcgg ccagaacgga cgtgccggaa
     2641 tacggacgtg acggaagctg gccaaatgcg gcgggcggct caacccggga cgaatgatgg
     2701 tgaccattac ttcaggccgt aaaaccgcac cgcagtatcg cacatgattt cgtcctgctc
     2761 cggcaggtca tagcggtaca aaaaccgttt cgttatcgtg tgccaacgct gatacggtgt
     2821 tgccagttca atcaccggcc agtcgctgcc ccacatgatg cgcgatgctc cgaagcattc
     2881 aacgatatgc tcaacccagg ggcgcacgtc attcatctgc cattccggac cagcctccgt
     2941 cgccagcccc gaaagcttgc agaagacgtt cgaatcgccg gccaatcgag ccagatcggc
     3001 agcccatggc tccatgttcc tcgaagcgat cggaggtttc gcagcgtgat cgataacgat
     3061 cttaagtttc gggtgcaggt tggcaaaaat ctgcataagc ggtaagtgcc gaggttggat
     3121 cagcgcgtcg aggcgtagtc cggtttccgc catggcgtgc agcgcgggct tcacgtcgtc
     3181 gcgaaaaatc cagtagctgt cggcaatatc ctgcagcatc ggccgcaggc ccttgatcag
     3241 cgggtccttg gcacgctggt tgatccgcgc agcggcatcg ggggcggcca ggtcgatcca
     3301 tccaacgact gctttcacca gcccgtgtga cccgcgagcg acctccagca gataatccgt
     3361 ttcggcctcg gtaggtgcag cctggaccag cacggtggca tcgatatcgt cgagcagcgg
     3421 acgcaaatcg tcgagcccgt aatcgcggtg gattgccatg tccggggtga tccaaccata
     3481 atcgcctcga tcgagacgcc agacgtgatg atgcgcatcg acgcggatca tgatgacacg
     3541 tgtcctccaa atgcgagacc ggtccatagc aaggcggcgg atccggactg cgtcaatccc
     3601 cggcatgcga aattggccct ggcgtgcgaa agtggccctg gcgtgcgaaa gtggtttgac
     3661 acggacaatc gatatgatcg ctgcaccggc ttcacccgag tagttcgatg gagacagcag
     3721 aatcaggtta cgcgatcgtg tcaaatcccg ctgcgccgcg aatggcacca tatgtgcata
     3781 ggctctcttc gcagccagtc gagtcgcacc tggcaccgcc gggatgttga cgcgccatcg
     3841 gagtacgtga ataagtgagg ctggcacagc gcgtgtgtcg caaccaacag gaaaggaaat
     3901 ccgggcgcag ttccgtgctc atcgccccga gcacacaaca gaggggtcca aaaaacgtgt
     3961 ggaaatatat gcttctaagc cttttgtgcc tggacgcctg tgcgtcgccg ggtgcaacaa
     4021 gcaatgtgcc agaacaggca gccctcaaag cagaaccaac aattccaacc aagacaatcg
     4081 agggcagggc atcgttttat gggggagagc gtgagggcaa actcacaagc agcggcaagg
     4141 ttttcaattc atcgctgatg accgctgcac atcctacact cccattcggc acaacggttc
     4201 ttgtgaccaa cctgcaaaac agccgcagtt gtaacgttga gattaccgat cgaggcccgg
     4261 cacgctggac ccacagggtc atcgacgtgt ctgaaggcgc tgccagatgc ctggagatga
     4321 tccgctcagg tgtcgtgccg gttactctgc aattcgccgg atgacagcag caacgcgctg
     4381 aagccgaatg gccgggcgcc cggtcaggat aaagttttca taaacaggcc ggaattttcg
     4441 gcgctggtgg atgatcacgt gccggttgct ggctcaaccg gacaataggc gtggaaaaaa
     4501 cgccgtgtgg cgcaagcgga aaacgtcgcg caaaaccagt gggaacgcaa ctcgcgaggc
     4561 gttacaaacg gccgccgtcg accacccaca tctgcgcggt gcacatccgg ctgtcatccg
     4621 atgccagcca caacaccatc cgcgcgagat cctgtggata aactttttcc ttcaggcatt
     4681 gcgccttcat cagagcggcc tcggcttccg gcgt
//
LOCUS       DATAVD010000462         2070 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2089858, whole genome shotgun sequence.
ACCESSION   DATAVD010000462 DATAVD010000000
VERSION     DATAVD010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2089858"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..495)
                     /locus_tag="VHX39_08575"
     CDS             complement(<1..495)
                     /locus_tag="VHX39_08575"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3991212.1"
                     /translation="MSAAVSEIPAQSMTIAKVKEHIGAIVTGLDLAQPVDDATRKKLN
                     EAAVENVVLVIRGQEHLTPGQVQAAGEIFGELMEDQNRRYLVDGFPLISVLDNRHKDS
                     KGQPAKVGANATWHTDHTNQELPPKFTMLYAVAVPDKGGATSVCNARAAYEALPDDVK
                     LKISD"
     gene            716..1468
                     /locus_tag="VHX39_08580"
     CDS             716..1468
                     /locus_tag="VHX39_08580"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3991213.1"
                     /translation="MPFYEKGDVRIRYEEAGKGFPLLVIPGGGLNSRVSNWPNAVFNS
                     MAMFQDEFHCVTMDQRNANGGESTGPVPASDPWDAFADDQLGLMDHLGIKQFLFIGYC
                     IGGCFAGKLMQRAPDRVVGAVFCQTVGHRPEDPTVMYRHSSENWVPDFMKRRPEVSRD
                     AVEKYLHDLYAAQPDFLHSVSRDFIRNCRTPMLVLPDDVPSHPLQTSIDVASLAPNAE
                     ITVFPWKEPEELKARTINRVRNFLRAHRPTTS"
BASE COUNT          393 a          622 c          624 g          431 t
ORIGIN      
        1 gtcggagatc ttcagtttca catcgtctgg gagcgcttcg taggccgcac gcgcgttgca
       61 aaccgatgtc gcgccaccct tatccggcac tgctaccgcg taaagcatgg tgaacttggg
      121 cggcaattcc tggttggtgt ggtcggtgtg ccacgtggcg ttggcgccca ctttcgcggg
      181 ctgacccttg ctgtctttgt gacggttgtc gagcacactg atcaatggaa atccatcaac
      241 caaatatcgc cggttctggt cctccatcag ttcgccaaag atttcgccgg cggcttgcac
      301 ctggcctggg gtgagatgct cttgccccct gatcacgaga accacgtttt cgacggcagc
      361 ctcgttgagc ttcttccgcg tcgcgtcgtc gacgggctgc gcaaggtcga gaccggtaac
      421 aatggcgccg atgtgctcct tcaccttcgc gatcgtcatg gactgggcag gaatttccga
      481 cacggcggcg ctcattatct gtctcctcct ggcgtggccc gcggtccgcg gcgggtgcgt
      541 gtggcggttc cggaaagcca ctctcgccaa caggatcggc cgaatggtcg catctatcaa
      601 gtgttgccct gtaactcgcc attccttccg gcaagactgc gccaggggcg cccaaccttt
      661 acgggatcgg cgccgtgcgg gagactgccg ccaataccca aggggagtga acaaaatgcc
      721 gttttacgaa aagggcgatg tccggatccg ctacgaggag gctggcaaag gattcccact
      781 cctggttatc cccggcggcg gcctgaattc ccgtgtcagc aactggccga acgccgtatt
      841 caactccatg gcgatgtttc aggacgagtt ccactgcgtc accatggacc agcgcaatgc
      901 gaatggcggc gagtccactg ggccggtacc ggcctccgac ccgtgggatg cgtttgccga
      961 cgaccaactc gggttgatgg accacctcgg gatcaagcag tttctcttca ttggctactg
     1021 catcggcggt tgctttgccg ggaagctgat gcagcgggcg cctgatcgtg tcgtgggcgc
     1081 cgtcttttgc cagaccgtcg gccatcggcc tgaagacccg accgtcatgt atcggcatag
     1141 cagcgagaac tgggtgcccg attttatgaa gcggcggccc gaggtgtcgc gtgacgcggt
     1201 tgagaaatac ctgcacgacc tgtatgcggc tcagccggat tttcttcaca gcgtgtcgcg
     1261 cgactttatc agaaactgcc ggacgccgat gctggtactg ccggacgacg ttccgtccca
     1321 tccgctgcaa acgtcgatcg atgtggcctc tctggcaccc aatgccgaaa tcacggtgtt
     1381 cccatggaag gaaccggagg agctcaaggc ccgaacgata aaccgggtgc gaaatttcct
     1441 tcgggcgcat cgaccaacga caagctaaac tgctcacctt gccgtctgct acggttctca
     1501 gaccgcgttc gcgcgcacgg cggccacgga cgtaaagcca acgaccagcg gcatcatcat
     1561 tacgcaaatg atggtgatgt ggctatcgac ggtgcaacgc gcgcgctggt cgttacggcg
     1621 agaaaacctt gatacccgtc gagtctgcca acaggtattc gcccagggcc gcagtttgcg
     1681 gtgatggggc aattaaacat tgaggagcgg tctacatgag gggtagcagt cttgtcgttg
     1741 cgctcgcggc gaaccggaga ggtccgccca tgattgtcga tccggtcacg gtcgttgcct
     1801 tttggtatcc tcgagccttc tcccggtgac cggactatca atcctcgcct cgcacgcggg
     1861 acactcatcg ccagcggcgt caccggcagg ggcgcaggga ttgccgggca tcacttcaca
     1921 gtgtttttga ctccctgaaa tcagtccttc ataagatgcg gcccgaccga ctgaggtcgg
     1981 catcaccggc gttccaagat caacaatata cccaacgacc gggtaatccg gcggcggggg
     2041 ggaggaaatc gcatgacgac aacacggggt
//
LOCUS       DATAVD010000463         8600 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1159631, whole genome shotgun sequence.
ACCESSION   DATAVD010000463 DATAVD010000000
VERSION     DATAVD010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8600
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1159631"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1375
                     /gene="shc"
                     /locus_tag="VHX39_08585"
     CDS             <1..1375
                     /gene="shc"
                     /locus_tag="VHX39_08585"
                     /EC_number="5.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003625617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051007 - squalene-hopene cyclase activity
                     [Evidence IEA];
                     GO_process: GO:0019746 - hopanoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="squalene--hopene cyclase"
                     /protein_id="HEX3991214.1"
                     /translation="PLARNPHGIQIHELFVTPPDQVKDWIRGPYRSNWGRFFKGLDTV
                     LRAVQPLFPRAGHERATRQAITFVTERLNGDDGLGGIYPAIANSVMMFDTLGFAPEHP
                     SAAIAWQAVRKLLVEFDDRAYCQPCLSPVWDTGLAGHAMLEAGIEVDQSCRWLLEKQI
                     IDVAGDWAVRRPGLRAGGWAFQYENPHYPDVDDTAVVGMLLARNGNPSYGESIDRARE
                     WIIGMQSKGGGRYDGGWGAFEPENTHLHLNHIPFADHGALLDPPTSDVTARCVSFLAQ
                     IGTAVTDPVMARALAFLRREQEADGSWFGRWGTNYIYGTWSVLCALNAVGLSYDDPAI
                     SRAVDWLISVQRDDGGWGEDEETYRNAPPGRYKESTPSQTAWAVLGLMAAAATDHPAV
                     ARGIAYLMQTHRTDGEWTELPYNAVGFPRVFYLRYHGYRLYFPLLALARYRNLRSANT
                     KRVPFGF"
     gene            1391..2536
                     /locus_tag="VHX39_08590"
     CDS             1391..2536
                     /locus_tag="VHX39_08590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrpF domain-containing protein"
                     /protein_id="HEX3991215.1"
                     /translation="MPLLAFPAVFMRGGTSRAVMFHARDLPPREEWDPIFLAAMGSPD
                     PNGRQLNGMGGGISSLSKVCVLAPSQRDDADIDFTFAQVQIREAAVDYRSNCGNMSSA
                     VGPFAVDEGLLRPNGDRAVVRIFNTNTRKIIRSTFPLTDGRAATDGTMAIPGVAGTGS
                     PVRLDFLAPGGATTGKLLPTGNPVDALMVPEVGIIAASMIDAANACVFVLARDLGLTG
                     RELPEALDQDSALLQKLQRIRRTASVAMGIARDEDEARTIHGAPIIGFVAPPMDAPTL
                     SGEPIVADQVDLTVRFLSNGQPHRALPLTASLCTGVAARIRGTLVNQVLGPNAGESVR
                     IGMPSGILTVDAEVSQERDGTWVAHSGAFYRTARRLFDGKVYVPTAA"
     gene            2875..3621
                     /locus_tag="VHX39_08595"
     CDS             2875..3621
                     /locus_tag="VHX39_08595"
                     /inference="COORDINATES: protein motif:HMM:NF014228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sir2 family NAD-dependent protein deacetylase"
                     /protein_id="HEX3991216.1"
                     /translation="MDEDLEELSRLIDTADRIVLFTGAGISTESGIPDFRSPGGIWTK
                     MAPIDFRDFMRSDEARRETWRRRFAMEDMFREAVPNRGHRACAELIRSGKATSVITQN
                     IDGLHQDSGIPDSKVIELHGNTTYAHCLECAQRYEIHALRVDFERDNILPHCACGGWV
                     KTATISFGQSMPVNEMRRAEQETLLADLFIVMGSSLVVYPAAGFPELAKRNGASLVIV
                     NREPTALDRAADLVLQRSIGETMGAMVGVE"
     gene            3786..4316
                     /locus_tag="VHX39_08600"
     CDS             3786..4316
                     /locus_tag="VHX39_08600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991217.1"
                     /translation="MLQTLNLPDWLPWWVPLALLVPASLWGLSFLFMPFSVFGVKSRL
                     EVIEGRLEEIQNDLRHMAGRFPAGVGPVSDYDEVFPPRLHEPRPDRIMTRPPIPPARH
                     ELYGAPNAERTGERPGERSAERQPAERHGEPQGEAPGEPTLEDRPPPSPNARPVRRNE
                     PVARAGRAEPRLDWRR"
     gene            4325..4780
                     /locus_tag="VHX39_08605"
     CDS             4325..4780
                     /locus_tag="VHX39_08605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013641063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEX3991218.1"
                     /translation="MNVDGETDTTIRRILTTTRRIALVGASMKPWRASHGVMRFLLDH
                     GFDVTPVNPLLAGQLLHGRMMVGHLQDAVPLDMVDVFRNSSHVDSLVDEAIRLGATSI
                     WMQLGVVDQEAAARARAAGITVVMDRCPVIEDRRLGLLGHRTGGSSPTH"
     gene            4863..5732
                     /locus_tag="VHX39_08610"
     CDS             4863..5732
                     /locus_tag="VHX39_08610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012226230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2076 domain-containing protein"
                     /protein_id="HEX3991219.1"
                     /translation="MTNEERDIISQFVARIGGAPAPSGAVAGSVPATTTAPLPPVDRD
                     ADALIGQLLQRYPEAAYRMTQLAFVQEQGLIQAQSRISQMEAELNRTRQALQQTQQQQ
                     SQPQQPQGGGGFFSSLFGGGRPQPAPPPNPGPWGGQQAAPPPGYAPPPSGYAPPPPQY
                     ASGYQPGMFQRSGPGFLGSALTTAAGVAGGLVAGNLLTNMLTGGHHESAWGQPSGGTE
                     GSPWGSPAATDQGTWDNTGGGAASNQDYVDNSSWDQQPAQDSSWTDNSGGGDSGSWDS
                     GGGDSGGGSDDSF"
     gene            complement(5736..6464)
                     /locus_tag="VHX39_08615"
     CDS             complement(5736..6464)
                     /locus_tag="VHX39_08615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX3991220.1"
                     /translation="MHYQWDFPFLLRYVPLFWKGILVTLAYTAGTIFLGLILGLLIGL
                     GRMARANFGVLSAIPVKFWLVSSAFWAFPLQWCLIAFVEAFRCTPLLVQIVWVYYALP
                     VVLGVQIPATVAAVMTLSCYTAAFYAEIFRGGIMSIERGQWDAARALGLRPWIMMRQV
                     ILPQAIRRMIPPFVNQSITQLKNTSLVSTIAVPDLLYNGTLITADTYRPLEVYTVVAI
                     IYFVLLFPSTMLAQWYEKRLQTDR"
     gene            complement(6481..7356)
                     /locus_tag="VHX39_08620"
     CDS             complement(6481..7356)
                     /locus_tag="VHX39_08620"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3991221.1"
                     /translation="MTPPPGAPLSRRVLAGVAALPLLGLALRGLGPIGTAHAQSDAES
                     TFDRVRRTKVLRIAALPGELPYFSKDLVSGEWSGSCIEMAKDIAKVFDAQLAYVESTY
                     GNSVLDLQSNKVDLAFALNPTPARALSIGFTHPMIIHPFGCVARKGLEPKTWSDINKP
                     DIRIVYDIGSLHETAAKRYCSKAQLTGFKNRDECLLNMQSGRADVHILAAILGLSEVG
                     KNPTVGTYYLLTEPLVALPSCLGIQRDADTRFRDVVNAWLDMARGSGQIREWMLAGLA
                     KAGVSPDQVPAALTF"
     gene            complement(7544..8437)
                     /locus_tag="VHX39_08625"
     CDS             complement(7544..8437)
                     /locus_tag="VHX39_08625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3991222.1"
                     /translation="MTQKTVRTPVLEIAYMETGPAEGPPVILLHGFPDDVHAYDGAAP
                     PLAAQGWRVLVPWLRGYGPTRFLSADTPRSGEQAALGLDLLDFMDALGIQRAVLGGYD
                     WGGRAACVVAALRPERARALMSINGYNIQNIAAALQPAAPAQEHRHWYQWYFNTERGR
                     AGLTANRYELCKLLWRLWSPNWQFTDGAYSTTAASFENPDFVDVVIQSYRHRHQNAFG
                     DPGLASIEALLAAQPSISVPTIVLHGEADGVGPVAGSETHARHFTNSYERRVIPVAGH
                     FLPNEAPEAIVQAVVDLGRRS"
BASE COUNT         1680 a         2575 c         2736 g         1609 t
ORIGIN      
        1 gccgctggct cgcaatccgc acggcatcca aatccacgaa ctgttcgtca ccccgccgga
       61 tcaggtcaag gactggatca gaggaccgta tcgctccaac tgggggcgat tctttaaggg
      121 gctcgacact gttctgcgtg ctgtacagcc gctgtttccc cgtgccggcc acgagcgagc
      181 gacccgccag gccatcacct tcgtgaccga gcgattgaac ggcgatgatg gactgggcgg
      241 catttaccct gccattgcta acagcgtgat gatgttcgat acgctgggat ttgcgccgga
      301 gcatccgagt gcggcaatcg cctggcaagc cgtgcggaaa ttactcgttg aatttgatga
      361 ccgcgcgtat tgccagcctt gtttatctcc ggtttgggat accggcctcg ctggccacgc
      421 gatgctggag gccggcattg aggttgacca atcctgccgt tggttgctgg agaaacaaat
      481 tatcgatgtt gccggagatt gggctgtgag acgcccagga ttgcgtgcgg gaggatgggc
      541 gtttcagtat gaaaatccgc attatccgga tgtcgacgat actgccgtgg tcggcatgtt
      601 gctggcccgg aacgggaatc cgtcttatgg ggagtcaatt gaccgggcgc gcgaatggat
      661 catcggcatg caatcaaaag gcggcggtcg ttacgatggc ggttggggcg cgtttgagcc
      721 ggagaacacc catctccatc tgaaccatat tccgtttgcg gaccatggtg cgctgctcga
      781 tccaccgacc agcgatgtca ccgcacgctg tgtctcgttt ctcgcgcaga tcggaacggc
      841 ggtgaccgat ccggtgatgg cccgggcgct ggcattccta cggcgggaac aggaggcaga
      901 cggcagttgg ttcggccgtt ggggcaccaa ctacatctac ggtacctggt cggtgctgtg
      961 tgcgttgaac gcggttgggc tcagttacga tgatcccgcg atcagccgcg ccgttgactg
     1021 gctcatatcg gtacaacgcg acgacggcgg ctggggcgaa gacgaagaaa cctatcgaaa
     1081 tgccccaccg ggccgataca aagaatccac tcccagtcaa acggcatggg cggtcctcgg
     1141 gcttatggcg gcagcggcta ctgaccatcc tgccgtggca cgcggcattg cgtacctgat
     1201 gcaaacccac cgcacggatg gggaatggac ggaattgccg tataacgccg ttggatttcc
     1261 ccgcgtattc tacctgcgct accatggcta ccggctgtat ttcccgttgc tcgcattggc
     1321 gcgctaccgc aacctgcgga gcgccaatac gaaacgggtc ccgttcggat tttaacccag
     1381 gaggcatccg atgccgttgc ttgcgttccc cgccgtgttc atgcgaggcg gcaccagccg
     1441 tgccgtcatg ttccacgcca gggatttgcc gccgcgcgag gaatgggatc cgatcttcct
     1501 cgccgccatg ggcagcccgg atcctaatgg gcgacaattg aacggcatgg gcggcgggat
     1561 ttcctcgctg tcgaaagtgt gcgtgctggc gccgtcgcaa cgtgacgatg ccgatatcga
     1621 cttcacgttc gctcaggtgc aaatccgtga ggcggcggtg gattaccgaa gcaattgcgg
     1681 caacatgagt tctgccgttg ggccattcgc cgtggatgaa gggttgctgc gtcccaatgg
     1741 cgatcgggcg gttgtgcgta ttttcaacac caatacgcgg aagatcatcc gctcgacatt
     1801 tccgctgacg gatgggcggg cagcgacgga tggcacgatg gcgatccctg gtgtggcggg
     1861 taccggttcg ccggtgcgat tggacttcct ggccccgggc ggtgcaacga ccggcaaatt
     1921 gttgccgacc ggcaatccgg tggatgcgtt gatggtgcct gaggttggga tcattgccgc
     1981 atcgatgata gatgctgcca acgcctgtgt gtttgttctg gcgcgcgatc tgggcctcac
     2041 tgggcgcgaa ttacccgaag cgctcgatca ggactctgcg ttgctgcaga agttgcaacg
     2101 tattcgccgc accgcttcgg tagcgatggg gatcgcgcgg gatgaggacg aggctcgcac
     2161 gatccacggc gcgccgatca tcggttttgt ggcgccaccg atggatgcgc cgacactgtc
     2221 aggcgagccg atcgttgcag atcaagtcga tctgaccgtg cggttcctgt cgaatggaca
     2281 accgcatcgg gcgttgccgt tgaccgcctc gttgtgcacc ggcgtcgctg cccggattcg
     2341 gggcacattg gtcaatcagg tacttggccc gaacgcaggg gaatcggtac ggatcggtat
     2401 gccttcaggg attttgaccg tcgatgccga ggttagtcag gaacgcgacg gcacgtgggt
     2461 cgcccacagc ggggcgtttt accggacggc gcgacggcta tttgatggta aggtgtacgt
     2521 tccgactgcc gcgtgaagca ctccgtggcc agctctgtga cgctcacatt tcacaaaact
     2581 ccagcgttaa tccgttgaat tatcgaaact aataggtttc caaggtagct ttcgcaatcc
     2641 gtggacagac gagcgggtgc atccacggat atggtcccgg aagggagaaa tctgagcgaa
     2701 cggcgcactg acatatggcg taccgggact tgagcacgaa ccgtgcgaag ggcaacaatt
     2761 cgctcctgac cgacgtcctc tcccataatc gagtgccgcc cattatcatc cgacacgacc
     2821 agcagcaccc gaaccgtcga tcgcacccag aacaacccga ccattggaaa aatcatggac
     2881 gaagacctgg aagaactctc ccgcctgatc gacacggccg accggatcgt gctgttcacc
     2941 ggcgccggga tcagcaccga atccggaatt cccgacttcc gcagcccagg tggcatttgg
     3001 accaaaatgg cgccgatcga ctttcgggat ttcatgcgct cggacgaagc gcggcgggaa
     3061 acgtggcgcc gccgcttcgc catggaggat atgttccgcg aagccgttcc taatcgcggc
     3121 catcgcgcct gtgccgaact gatccgcagc ggcaaggcga cctcggtcat cacgcagaac
     3181 atcgatgggc tacaccagga ctccggcatt ccggacagca aagtgatcga gttgcacggc
     3241 aacaccacct acgcgcattg cctggagtgc gcacaacgtt acgaaatcca cgccctgcgg
     3301 gtcgacttcg agcgcgacaa tatcctgccg cattgcgcct gtggcggctg ggtcaaaacc
     3361 gcgaccatct cgttcggcca gtccatgccc gtcaacgaaa tgcggcgtgc cgagcaggag
     3421 accttgctcg ccgacttgtt catcgtgatg ggctcgtcgt tggtcgtcta ccccgccgcc
     3481 ggatttccgg aactggccaa acgtaacggc gcctcactgg tgatcgtgaa ccgggagccg
     3541 acagcgctgg accgcgcggc cgatctcgtg ctgcagcgtt caatcgggga aacgatgggt
     3601 gcgatggttg gggtcgagta gtaccggcca cggcaaccgc ccgcacgggc agggtggcgc
     3661 gccggggcgg cgtcagtttc ttgcgcatta tttggcaggg tacctatggg ccggcctgag
     3721 cacagtataa ggttgtctgg aaatagcggt tggtccgact cagcggttca tgccaggagt
     3781 gtctgatgct gcaaacgctc aatcttccag actggctgcc gtggtgggtg ccgctggccc
     3841 tgctggtgcc ggcctcgcta tggggactgt cgttcttgtt catgccgttc agtgtgtttg
     3901 gcgtgaaaag ccggcttgag gtgatcgagg ggaggctgga ggagatccag aacgacctcc
     3961 gtcacatggc tgggcggttt cctgcgggcg ttggaccggt ctcggattac gacgaagtgt
     4021 ttccacctcg actccatgag ccacgccccg atcggatcat gacacgtccg cccattccgc
     4081 ccgcgcggca cgaactctat ggtgcgccga acgcggagcg aaccggggaa cgaccgggtg
     4141 aacgctccgc ggaacgtcag ccggcggaac gccatggcga gccccaaggc gaagcgccgg
     4201 gtgaaccgac gctcgaggat cggcctccgc cgtcgccaaa cgcccgccca gtacgtcgca
     4261 acgagccggt tgctcgggca ggtcgggccg agccaagact ggactggcgc cgctaggccc
     4321 gcgcatgaac gtcgatggcg aaaccgatac gaccatccgg cggatactga ccacgacacg
     4381 ccgcatcgca ttggtgggcg cctcgatgaa accgtggcgg gcatcgcatg gcgtgatgcg
     4441 gtttctgctg gaccacggct tcgacgtcac ccctgtcaat ccgctgctcg ccggtcagtt
     4501 gctgcatggg cgaatgatgg tcgggcatct acaggatgcc gtcccgttgg acatggtcga
     4561 tgtgttccgg aactccagcc atgtcgatag cctcgtcgat gaggccattc gcctcggcgc
     4621 gacgagcatc tggatgcaat tgggcgtggt ggatcaggaa gcggcggcgc gcgcccgggc
     4681 ggccggtatt accgtggtaa tggaccgctg tccggtcatc gaagatcgcc gactgggtct
     4741 gttgggtcat cgaacgggag gctcatcgcc gacccattga accggagcga tgacggtgcc
     4801 acatcgcacc gtagtgctta cgggccgttg agccaacaac cagtgaccca tcggggattc
     4861 acatgaccaa cgaagaacgc gacatcatct cccagttcgt tgcccggatt ggcggcgcac
     4921 ctgccccgtc aggtgccgtg gcaggctcgg tgccggctac cacgacagcg cctctgccgc
     4981 cggtggatcg agacgcggat gcgttgattg gccagttgct ccagcgctac cccgaagcag
     5041 cataccgtat gacccagctc gccttcgtgc aggagcaggg gctgatccag gcacaaagcc
     5101 ggatctcgca gatggaagcg gaactgaatc gcacccgcca ggccttacaa cagacgcagc
     5161 agcaacagtc gcaacctcag cagccgcaag gtggcggggg gttcttcagc agcctgttcg
     5221 gcggtggccg tccacaaccc gctccgccac cgaatcctgg gccgtggggc ggccagcagg
     5281 ccgcaccccc accgggctat gcgccgccgc cgtccgggta cgcgccgcct cccccgcaat
     5341 acgcgtcggg ttatcagccc ggtatgttcc aacgcagcgg tccgggcttt cttggctcag
     5401 cgctaaccac cgccgccggc gtcgcaggcg gtctggtggc gggtaacctg ctgaccaaca
     5461 tgctgaccgg cggtcatcac gagagtgcgt ggggtcagcc gtcgggtgga accgagggca
     5521 gtccgtgggg ttcccctgcg gcaaccgatc aagggacctg ggacaatacc ggcggagggg
     5581 cggcctccaa tcaggactat gtcgacaaca gttcctggga ccagcagccg gcgcaggact
     5641 cgtcgtggac cgacaatagt ggcggtggcg acagcggcag ctgggattcc ggtggcggtg
     5701 acagcggtgg cgggtcggac gactcattct gaggcttatc ggtcggtctg cagtcgcttt
     5761 tcgtaccact gcgcgagcat cgtgctggga aacagcagca cgaaataaat gatcgcgacg
     5821 acggtataga cctccagcgg ccgataggtg tccgcggtga tcagtgtgcc gttgtacagc
     5881 aggtccggca ccgcaatggt cgataccagc gaggtatttt tcagttgtgt aatcgactga
     5941 ttgacgaatg gcggaatcat gcgccggatc gcctgtggca agatcacctg acgcatcatg
     6001 atccagggac gtaggccaag cgcacgtgcc gcatcccact ggccacgttc aatcgacatg
     6061 atgccaccgc gaaatatttc tgcataaaac gcggccgtgt agcacgacaa tgtcatgacg
     6121 gcggcgacgg ttgccgggat ttgcacacca agcaccaccg gcaacgcgta atagacccaa
     6181 acgatctgca caagcaacgg tgtgcagcga aatgcctcga cgaacgcgat caggcaccac
     6241 tgcagaggaa atgcccagaa tgcggacgag accagccaga acttcacggg aattgccgac
     6301 agcacgccaa agtttgcccg tgccatgcgt ccaagaccga tcagcaagcc gaggatcagg
     6361 ccaaggaata tcgttcccgc cgtataagcc agcgtgacca ggatgccttt ccagaacaat
     6421 ggcacgtaac gcagcagaaa cgggaagtcc cattgataat gcatgggacc tgtcgtccgc
     6481 tcagaaggtc agcgcagccg gcacctgatc gggagacacg ccggccttgg cgaggcccgc
     6541 cagcatccac tcgcgaatct gtccgctgcc tctggccata tcgagccagg cattgacgac
     6601 atcccggaac cgtgtgtccg catcacgttg gatgccgagg caactgggca gtgcaaccag
     6661 cggctcggtc agcaaataat acgtgccaac cgttgggttc ttgccaactt cggaaaggcc
     6721 caggatggcg gcgagaatgt gaacgtcggc tctgccggat tgcatattga gcaagcactc
     6781 gtcgcggttt ttgaacccag tcaactgggc ttttgagcag tagcgtttcg ctgccgtttc
     6841 atgcaacgat ccgatatcgt aaacgatccg gatgtcgggc ttattgatgt cggaccaggt
     6901 tttcggttcc agacccttgc gagcgacgca gccgaacggg tggatgatca tcgggtgggt
     6961 gaagccgata gaaagtgcgc gcgccggtgt tggattgagc gcgaaggcaa ggtcgacctt
     7021 gttcgactgc aggtcgagca ccgagttgcc ataggtggat tccacatagg ccaattgggc
     7081 atcgaacact ttggcgatgt ccttggccat ttcgatgcag gaaccgctcc attcgccgga
     7141 gacgaggtcc ttcgagaaat acggcaactc cccgggcagc gcggcaatcc gcaacacctt
     7201 ggttcggcgg acgcggtcga atgtgctctc ggcatcggat tgcgcatgcg cggtgccgat
     7261 tggtcccagg ccgcgcaacg ccaggccaag tagcggcaac gctgcgacgc cagccagaac
     7321 gcggcggctc agtggagcac cggggggtgg ggtcatgttt ggcctctcct gtgtcccggc
     7381 gctggccggc aaactctgcc gcacagaatg gcggcacgat ggtgcggtgc gcaagcctgg
     7441 tcctgggtgg tgcggcgagt gtgtctggca aagcaacgcc gttgctttcg atccgtgacg
     7501 acctccgtcg gttagcagcg tttgttcgcc gtcgccggcc ggctcagctt cgccgcccaa
     7561 gatctacaac tgcctgcaca atggcctccg gggcctcatt gggcaggaaa tgaccagcca
     7621 cggggatgac ccggcgttca taactgttgg tgaaatgcct cgcatgggtc tccgaccctg
     7681 ccaccgggcc aacgccatcc gcctcaccat gcagaacgat cgtgggcacg ctaatcgagg
     7741 gttgcgccgc gagaagcgcc tcgatcgatg ccaggcccgg atcaccaaac gcgttctggt
     7801 gtcgatgtcg atacgactgg atcaccacat cgacaaagtc gggattttcg aaactcgcgg
     7861 cggtcgttga ataggcgcca tcggtgaatt gccagttggg cgaccaaagg cgccacagca
     7921 acttacagag ctcgtaccgg ttggcggtaa ggccggctcg gccgcgctcc gtgttgaaat
     7981 accattgata ccagtgtcga tgctcctgcg cgggtgccgc gggctgcaac gcggcagcga
     8041 tgttctggat gttatagcca ttgatggaca tcagggcacg ggctcgttcc gggcgcaggg
     8101 ccgcgacgac acacgcggcc cgcccgcccc agtcatagcc accgagcaca gcgcgctgga
     8161 tgccaagcgc gtccatgaag tccagcagat ccaaaccgag tgcggcctgt tcgccggagc
     8221 gaggcgtgtc cgcggacaaa aagcgggtcg ggccataacc ccgcagccat ggcacgagaa
     8281 cgcgccaacc ttgtgcagcc agcggtggcg cggcgccgtc gtaggcgtgg acgtcatcgg
     8341 ggaagccatg cagcaggatc accggcggcc cctcggccgg tccggtttcc atgtaggcaa
     8401 tttccaacac cggcgtgcga acggtttttt gggtcatggt tcctcgatct cctcggccca
     8461 atggcggtgg atcatcctaa agcggtgagc aggcctcggc cacagtttgc gccagcaaat
     8521 aaatccgccg cgcggtaatg cccgcaccag gagcggccga tgcaatggat cgcaacaccg
     8581 gcgcatcagc caggaaatgc
//
LOCUS       DATAVD010000464         1565 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2276222, whole genome shotgun sequence.
ACCESSION   DATAVD010000464 DATAVD010000000
VERSION     DATAVD010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2276222"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..337
                     /locus_tag="VHX39_08630"
     CDS             134..337
                     /locus_tag="VHX39_08630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991223.1"
                     /translation="MATAPVIHGSVSIADAITDVELSVVGEAAMPSLTDSVIPVVMRA
                     HQHSAGAQKKPAKTRRSAEAKAV"
     gene            313..723
                     /locus_tag="VHX39_08635"
     CDS             313..723
                     /locus_tag="VHX39_08635"
                     /inference="COORDINATES: protein motif:HMM:NF033580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEX3991224.1"
                     /translation="MGRSKGGLSSKFHVLADALGNPLKIVLTAGQVHDLAGADALLPD
                     LEAKALLADKAYDADERVIKPLEAAGIAVVIPPKRHRKNPRKFDKPLYQARHLIENFF
                     CWVKQFRAIATRYDKTARNFLAAFNLVAVLCWLN"
     gene            complement(778..>1565)
                     /locus_tag="VHX39_08640"
     CDS             complement(778..>1565)
                     /locus_tag="VHX39_08640"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975907.1"
                     /note="This protein belongs to a clade of FMN-dependent
                     monooxygenases, within a broader family of
                     flavin-dependent oxidoreductases, the luciferase-like
                     monooxygenase (LMM) family, some of whose members use
                     coenzyme F420 rather than FMN; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NtaA/DmoA family FMN-dependent monooxygenase"
                     /protein_id="HEX3991225.1"
                     /translation="LNHHGEHLSVRGPLNIARPIQGWPVIVQAGASEVGRQFAAETAE
                     VVFGSSRTMNEAQSFYKDVKRRVTAAGRSPDHCKILPGALVIVGRTTEEAREKQALLN
                     SLVHPESGLPNLSIRLGIDASGFDLDAPLPEIPPSNQSQSQRDTLVALARRDKLTVRQ
                     LAQMMGGFGGLEIVGTAGEIADTMQSWLETDAADGFNIMFPTVPAGLDDFVELVVPEL
                     QHRGIFRKEYAGTTLREHFGLPRPENQFFQPGSQPGSKKTTAR"
BASE COUNT          325 a          468 c          454 g          318 t
ORIGIN      
        1 ccgacaaatt ggtgaacgtg ccagtgccgg cgccgacatc gtcacggtaa ccgtatcagt
       61 cgtaccgata tttggatcga tcaggctgac cgtggcgaac ggtgtgcttg gggtttcgtt
      121 cggcacaccc tgattggcca ccgcgccagt gattcacggc agcgtttcga ttgccgacgc
      181 gatcactgac gtggaactgt ccgtggtcgg cgaggcggcg atgccgtcgc tgaccgacag
      241 cgtcattccc gtggtcatgc gagcccatca gcacagcgcc ggcgcccaaa aaaagccggc
      301 gaagaccagg cgatcggccg aagcaaaggc ggtctgagca gcaaatttca cgttttggcc
      361 gacgctctgg gtaatccatt gaagatcgtt ctgaccgcgg gccaggtcca cgatctggcc
      421 ggggctgacg cgcttttgcc cgacctggaa gcaaaggcgt tgctggcgga caaggcgtac
      481 gacgctgatg aaagggtcat caaaccgctg gaagcggccg gtatagcggt cgtgatccca
      541 ccaaaacggc atcgcaagaa cccgagaaag ttcgataaac cgctctacca ggcccgtcac
      601 ctgatcgaga acttcttctg ctgggtcaag caatttcgcg cgatcgcgac acgttatgac
      661 aagaccgcca ggaacttcct cgcggccttc aatttggtcg cagtactgtg ctggctcaat
      721 tgacgacagg ccctggatcg aaatgaaaca ttcctgacca gaagcgctcc ggtgttgtca
      781 cctggcggtt gtctttttcg aaccaggctg gctgcccggc tggaaaaatt ggttttccgg
      841 acgtggtaaa ccaaaatgct cacgcagggt cgtccccgca tattccttgc ggaagatacc
      901 gcggtgttgc agctcaggga cgacaagctc cacgaaatca tcgaggccgg ctggcaccgt
      961 tgggaacatg atattgaacc catcggcggc gtccgtctcc aaccacgact gcatcgtatc
     1021 ggcaatttcg cccgccgtcc caacgatctc gaggccaccg aagccaccca tcatttgggc
     1081 aagctggcgg accgtcaatt tatcgcggcg cgccagtgcc acgagcgtat cgcgctggct
     1141 ttggctctgg ttggacggcg gaatttctgg caacggcgca tcgagatcaa accccgaggc
     1201 gtcgatacca aggcggatcg acagatttgg cagcccgctt tcgggatgca ccagactgtt
     1261 gagcagagct tgcttttctc gcgcctcctc ggtcgtacgt ccgactatca cgagcgcacc
     1321 gggtaggatt ttgcagtgat cgggcgaccg tcccgctgcg gttacgcgcc gcttcacatc
     1381 cttataaaag ctctgggctt cattcattgt tctactgctg ccaaatacga cttcggctgt
     1441 ttcggcggcg aattgccgac ccacctcgga tgcgccggcc tggacgataa ccggccaacc
     1501 ctggatcggc cgcgcaatgt tcaacggtcc ccgcacggat aaatgctcac catgatggtt
     1561 gagga
//
LOCUS       DATAVD010000465         3364 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3581719, whole genome shotgun sequence.
ACCESSION   DATAVD010000465 DATAVD010000000
VERSION     DATAVD010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3364
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3581719"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..846
                     /locus_tag="VHX39_08645"
     CDS             <1..846
                     /locus_tag="VHX39_08645"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3991226.1"
                     /translation="EPGGGSDLAALRTRAEKDGDGWVVNGQKIWNSGAHYSDYGILVA
                     RTDPDAVKHAGLSFFILDMKTPGIEIRPIRQVSGSSHFNEVFFTNVRIPDTRRVGPVG
                     AGWKVALTTLMNERHGMRDAPGPDFNELFSLARQVELEDGLAIDNAAVQEKLAEFYVR
                     SQGLKFTKFRGMTALSRGQTPGPESSIIKVVAANKLQDILSYGLDMIGMAGPTMGDSM
                     PVSGIFEEALLYSPALRLAGGTDEIMKNIIAERVLGLPQDPRVDKGVPWRDVPTGPRA
                     TGAKQ"
     gene            843..2957
                     /locus_tag="VHX39_08650"
     CDS             843..2957
                     /locus_tag="VHX39_08650"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEX3991227.1"
                     /translation="MSSHPLHSFFWPESIAVLGASPDLHRIRGRLLHQLRENGFPGRI
                     LPINPSYQDIAGLKCFPSIGAVGGPVDLALVAIPAAGVAAAVEECAKAGVKNALIISS
                     GFAEEGGAASEMQANLVAVTDTYGIRACGPNCEGYFNALGRVATTFSPTVETQEDPDA
                     VYVSPRRIGVIAQSGGIGFSLFNRGKAAGLAFSYVISTGNEADLGMADFLDYMIEDAH
                     TAAVMLFCETVRNGPAFVAALAKARALGKPVIAIKVGRSDAGTRASASHTASLSGSYT
                     AYHAVFERYGVIEAEDPDEAIAIAGVVLSCPLPKGRRVGIVTVSGGGGAWTADTMSAH
                     GLIVPQLSVAEQARLRPLMPSYGAAGNPVDVTAQGSNTGPAMMTAMEHLAESNEIDML
                     LLVSSLASTTRASLDPARIRAVAAKCGKPMTVWTYTLPSEFGRNASSGCGLFLHSDLR
                     ACGLAFGKLCDYAEAMARPLPEAFDPVPARLQPGLPKIVPEFQAKQALAAWLPPAAER
                     LVHSAEAAAEAAAALGFPVVLKVQSADLPHKTEAGGVRLNLTDRAAVTAACTAMLGDV
                     VRHKPEAKIDGVLVQKMAPKGHELVIGMVNDPTFGPIMMVGYGGTTVELFGDVVHAPA
                     PVDEAEATRMILALRSARLLTGFRGSAPIDLAPMAKLVAALSRAALTLRGQLAEFELN
                     PVILHADGSGLTVADALLTMQG"
     gene            complement(3023..>3364)
                     /locus_tag="VHX39_08655"
     CDS             complement(3023..>3364)
                     /locus_tag="VHX39_08655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEX3991228.1"
                     /translation="MTMVTIGISPNDETKTRMRRAFDGKPQGAHISFPSVELLWKVLT
                     PRRWEMLRVMAGSGPLAIRALARRIGRDVKTVHGDIHALLSAGVVDRTEDGLVVFPYD
                     AVHVDFVLRAA"
BASE COUNT          607 a         1036 c         1091 g          630 t
ORIGIN      
        1 gagccgggcg gtgggtccga tctcgcggcg ctgcgcacgc gggcggaaaa ggatggcgac
       61 ggatgggtgg tgaacggcca gaagatctgg aactccggcg cgcattacag cgattacgga
      121 attttggtgg ctcggacgga ccccgatgca gtgaagcacg ccggcctgtc gttcttcatt
      181 ttggacatga agacgcctgg catcgaaatt cggccgatcc gccaggtgtc ggggtcatcg
      241 catttcaacg aagtgttctt caccaatgtg cgcattcccg atacccgacg ggtcggaccg
      301 gttggcgccg ggtggaaagt ggcactgacg acgttgatga acgaacggca cggcatgcgc
      361 gacgcccctg gacccgactt caacgaactc ttctcgctcg cccgtcaggt ggaactggag
      421 gacgggctgg cgatcgacaa cgccgccgtg caggaaaagc tggcggaatt ctacgttcgc
      481 tcgcagggcc tgaaattcac caaattccgc ggcatgacgg cgttgtcgcg tggccagaca
      541 ccggggcctg aatcgtcgat catcaaagtc gtggcggcga acaaattgca agatattctg
      601 tcgtatgggc tggacatgat cggcatggcc ggaccgacca tgggagactc catgccggtg
      661 tccggcatct tcgaagaggc cctgctgtac tcaccggcat tacggctggc cggcggcacc
      721 gatgagatca tgaagaacat cattgcggaa cgcgtactgg gtctgccgca ggatccgcgg
      781 gtggataagg gcgtgccatg gcgcgatgtg ccgaccggac cgcgggcgac gggtgcgaaa
      841 caatgagcag tcatcccctc catagtttct tctggccgga atcgattgcg gtcctcggcg
      901 cctcgcccga cctgcatcgc atccgtggcc gcctgctgca ccagttgcgc gaaaacggct
      961 ttccgggtcg cattctgccg atcaatccaa gctaccagga tatcgccgga ctgaagtgct
     1021 ttccctcgat cggcgccgtc ggcgggccgg tcgatttggc gcttgtcgcc atccccgccg
     1081 ccggcgttgc cgccgcggtc gaggaatgcg ccaaagccgg cgttaaaaac gccctgatca
     1141 tctcgtcagg tttcgccgaa gagggcggtg cggcgagcga gatgcaggca aacctcgtcg
     1201 cagtgaccga cacctatggc atccgcgcct gcggccccaa ttgcgagggt tacttcaacg
     1261 ccctcggccg cgtcgcgacg acattcagcc caaccgtgga gacccaggaa gatcccgacg
     1321 cggtctacgt gtcaccgcgg cgcatcggcg tgatcgcgca atccggcggg atcgggtttt
     1381 cgttgttcaa tcgcggcaag gcagcaggtc tggcatttag ttacgtgatc tcaaccggca
     1441 atgaggccga tctcggcatg gccgatttcc tcgactatat gatcgaggac gcgcacaccg
     1501 ccgccgtcat gctgttctgc gaaacggtgc gcaacggtcc cgcatttgtc gccgccctcg
     1561 ccaaggcccg cgcactgggc aagccggtga ttgcgatcaa agttggccgt tcggacgccg
     1621 gcacccgcgc ctccgcctcg cacacggcgt cgctgtcggg gtcgtacacc gcctatcatg
     1681 ccgtgttcga acggtacggc gtgatcgagg cggaagaccc tgacgaagcc atcgccattg
     1741 ccggtgttgt gctgagctgc ccattgccga aagggcgccg cgtcgggatt gtcacagtct
     1801 ccggtggcgg cggcgcatgg acggcggaca cgatgtcggc gcatgggctg atcgtgccgc
     1861 agttgtcagt ggccgagcag gcacggctgc gcccgctcat gccgtcctat ggcgccgccg
     1921 gcaatccggt cgatgtgact gcgcaaggtt ccaataccgg tccggcaatg atgacggcca
     1981 tggaacatct ggccgagagc aatgagatcg acatgcttct gctggtcagt tcgctcgcca
     2041 gcacgacgcg ggcgtcgctc gatccagcgc gcatccgggc ggtggcggca aagtgcggca
     2101 aaccgatgac ggtgtggacc tacacattgc cgtcggagtt cggccgcaat gcgtcatccg
     2161 gctgcggcct gttcctgcac agcgatttgc gcgcctgcgg cctggcgttc ggcaaattgt
     2221 gcgattacgc cgaggcgatg gcgcggccgt tgccggaagc gttcgatccg gtcccggctc
     2281 gattgcaacc cggtctgccg aagatcgtgc cggagtttca ggcgaaacag gcactggctg
     2341 cgtggttacc accggctgcc gaacggctcg tgcattccgc cgaggccgct gccgaggctg
     2401 ccgcagcgtt gggtttcccg gtcgttctga aagtgcaatc ggccgatttg ccgcacaaga
     2461 ccgaggccgg cggtgtaaga ctcaatctta ccgaccgcgc ggccgtgact gccgcgtgca
     2521 ccgctatgct cggcgatgtc gtgcggcata agccggaggc gaagatcgat ggcgtgctgg
     2581 tgcagaagat ggctccgaaa ggccatgagc tggtcatcgg tatggtgaac gacccgacct
     2641 tcggcccgat catgatggtt ggttacggcg gcaccacggt cgagctattt ggcgatgtcg
     2701 tgcatgcgcc cgctccggtc gatgaggcag aggcgacaag gatgatcctg gcgctgcgct
     2761 cggcgcgatt gctgaccggg ttccgtggtt cggcgccgat cgatctggca ccaatggcaa
     2821 agctggtggc agccctgtcc cgcgcggcgt tgacgttgcg cggccagttg gcggagttcg
     2881 aactgaaccc ggtcattttg cacgctgacg gctcagggct gacagtcgcg gatgcgttgc
     2941 tgacgatgca agggtgaccg cctgaattta tgcgcgggcg acgggagcaa tcgaacattc
     3001 tcggtgccaa cgcccgcatg tctcacgccg cccgcagcac gaagtcgacg tggactgcgt
     3061 catacggaaa cactaccagg ccgtcttccg tgcgatcgac cacacccgcg ctcaacaagg
     3121 cgtggatgtc gccatgcacc gtcttcacgt cccgcccgat acggcgggcc agtgcgcgga
     3181 ttgcgagtgg accagatcca gccatgaccc tcagcatttc ccaacgtctg ggcgttagca
     3241 ctttccaaag caactcaacc gacggaaagc tgatgtgagc tccctgtggt ttaccgtcga
     3301 atgcccggcg catccgcgtc ttcgtctcat cattcggcga aatgccaatc gtcaccatgg
     3361 tcat
//
LOCUS       DATAVD010000466         1580 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2090290, whole genome shotgun sequence.
ACCESSION   DATAVD010000466 DATAVD010000000
VERSION     DATAVD010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2090290"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..364)
                     /locus_tag="VHX39_08660"
     CDS             complement(<1..364)
                     /locus_tag="VHX39_08660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEX3991229.1"
                     /translation="MPEYLDRLFSSTGFMPHGMCYQWQAGILALHVIADSLIALAYFS
                     IPFTLLYFVRRRKDLQFNWIFVCFAVFIIACGLTHLMEIWTVWEPVYWLSGGVKAVTA
                     LASVPTAILLVRLIPAAVR"
     gene            complement(543..1445)
                     /locus_tag="VHX39_08665"
     CDS             complement(543..1445)
                     /locus_tag="VHX39_08665"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3991230.1"
                     /translation="MTTRRDALRFGLAAGAALAGLGAADLPVIRKTIPSTGEKLPAVG
                     IGTDQFRASERAAIQAELQRMQQMGGTVIDTAAAYGDSEAVLGDSLATLGIRERMFLA
                     TKLTVNEAGTATRSGEESFSRSLTHLKTRRVDLLQVHNLEGVEALMPVLQRWKQAGKI
                     RYIGITTSRVGQHSHMVEYMRQYPLDFVQVDYSLANRDAAANVLPLALEKRIAVLANV
                     PFGYGSVLRQAQMRQLPAWAADLDVTSWSQFLLKYVIAHPAVTCVIPGSTRIEHLEQN
                     QLAGRGRLPDEALRTKMEQVWDAA"
BASE COUNT          306 a          524 c          479 g          271 t
ORIGIN      
        1 agcgcaccgc cgccgggatg agcctgacga gcaggatcgc cgtcggaacc gatgccagcg
       61 cggtcaccgc tttcacgccg cccgagagcc agtagaccgg ctcccagacc gtccagatct
      121 ccatcaggtg cgtgagcccg caggcgatga tgaacaccgc gaaacacacg aaaatccagt
      181 tgaactgcag gtccttgcgg cgtcggacga agtacagcag ggtgaaggga atcgagaagt
      241 acgccaacgc gatcagcgag tcggcgatga cgtgcagcgc cagaatcccg gcctgccact
      301 gataacacat gccatggggc atgaagcctg tcgaggagaa caggcggtcg aggtactctg
      361 gcattacgca gtcctagcga tttttcttgg gcaactgcga atacgataac agagccggcg
      421 caccccggca tgccgcgtcc cgcccgggcg ggacgcagtc cacaggacta cggagtcggt
      481 ggcggtacgt tcatcgccct gtcagccggc gtgacggtac tctgcagcgc ccgccatcgc
      541 tgtcaagccg cgtcccagac ctgctccatc ttcgttcgca acgcctcatc gggcagccgg
      601 ccgcggccgg cgagctggtt ctgctcgagg tgctcgatcc gggtcgagcc gggtatgaca
      661 caggtcaccg ccgggtgcgc gatgacgtac ttcaacaaaa actgactcca actcgtcacg
      721 tcgaggtccg ccgcccaggc gggtagctgg cgcatttgcg cctggcgcaa caccgagccg
      781 taaccgaacg ggacgttggc caacaccgcg atgcgcttct cgagcgcgag cggcaacacg
      841 ttcgcggccg catcgcggtt ggcgagcgag tagtcgacct gcacgaagtc gagcggatac
      901 tgccgcatgt attcgaccat gtgactgtgt tgacccacac gcgaggtcgt gatgccgatg
      961 taacggatct tgcccgcctg cttccagcgc tgcagcaccg gcatgagcgc ctccacgccc
     1021 tcgaggttgt gcacctgcaa aaggtcgacc cgtcgagtct tcaaatgcgt caacgagcga
     1081 ctgaaactct cctcgccgga acgcgtggcc gtgccagcct cgttgacagt caacttcgtg
     1141 gcgagaaaca ttcgctcccg gatcccgagc gtggcgagtg aatcgccaag caccgcttcg
     1201 ctgtccccgt aggctgccgc ggtgtcgatg accgtcccgc ccatttgctg catccgttgg
     1261 agttccgcct ggatcgcagc acgttcgctg gcacggaact ggtcggtgcc aatccccacc
     1321 gccggcaact tctcgcccgt ggagggaatg gtcttcctga tcacgggcag atcggcggcc
     1381 cctaaccccg ccagcgccgc accggccgcc aagccaaagc gtagcgcatc gcgtcgtgtc
     1441 gtcatgtctg ccaaggctcc cttcgcctgt ataaatgcac agtcgcaaaa aacgtccggt
     1501 tccattgtag gacaacggct gattgttctc ggagcgcctg ccgctaagcc cggcgttggc
     1561 cgtagactga cgcccaaatt
//
LOCUS       DATAVD010000467         1748 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_44761, whole genome shotgun sequence.
ACCESSION   DATAVD010000467 DATAVD010000000
VERSION     DATAVD010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44761"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..466
                     /locus_tag="VHX39_08670"
     CDS             <1..466
                     /locus_tag="VHX39_08670"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX3991231.1"
                     /translation="EVTETLLLDDEELFAARMHQLKTIGVGLAIDDFGTRYTGFNILQ
                     RLPLDTMKIDRCFIRGIHRSMDMRTLCGTIIAMARHMKLRTVAEGIEEPEELDVMQQI
                     GCDAGQGYLFQRPMSVPDFTAFLREWPARMAGLGFASPGELSEIDPLYGIAQ"
     gene            551..1081
                     /gene="fabZ"
                     /locus_tag="VHX39_08675"
     CDS             551..1081
                     /gene="fabZ"
                     /locus_tag="VHX39_08675"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: protein motif:HMM:TIGR01750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEX3991232.1"
                     /translation="MTFDIQEILGFLPHRYPFLLIDRIVEFERTKRLVAIKNVTINEP
                     FFQGHFPGYPIMPGVLVVEAMAQAGGIIIMYELPDREKKLVVFTGIERAKFRRPITPG
                     DQIRLEVDVLSFRPRAGRIEGKAYVDGKLACEATLTCQVVPRVREPRAVEVPAPMTDA
                     QVAAEAAAAAVVSETE"
     gene            1078..>1748
                     /gene="lpxA"
                     /locus_tag="VHX39_08680"
     CDS             1078..>1748
                     /gene="lpxA"
                     /locus_tag="VHX39_08680"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: protein motif:HMM:NF003657.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEX3991233.1"
                     /translation="MSVHPSAIIAPGAVVPESCTVGPYSTIGPDVVLGETCTLISHVV
                     LDGRTRIGARNTIFPFASIGVAPQDLKYAGEPTETEVGDDNTIRECVTISRGTNKGGG
                     MTRVGSGCLLMAYVHIGHDSHVGNHCILANCATLAGHVIIEDYASVGAFCPVHQFCTV
                     GQYAFIGGGTIVTQDVLPFSLTSSRRENKAFGINKVGLSRRGFTPERLSTLQKAFRLL
                     LAAKM"
BASE COUNT          318 a          501 c          592 g          337 t
ORIGIN      
        1 ggaagtgacg gaaacgctgc tgctggatga tgaggagttg ttcgcggccc ggatgcacca
       61 gttgaagacc attggcgtcg ggctcgcgat cgacgacttt ggcacgcggt atacggggtt
      121 caacatcctg cagcgcctgc cgcttgacac gatgaagatc gaccgctgct ttatccgcgg
      181 gattcaccgg tccatggata tgcggacctt gtgcgggacc atcatcgcga tggcgcgcca
      241 catgaagctg cgcaccgtcg cggagggcat cgaggaaccc gaagaactgg acgtgatgca
      301 gcagatcggc tgcgatgccg gacagggata cctgttccag cggccgatga gcgttccaga
      361 cttcaccgcc ttcctgcgcg agtggccggc gcggatggcg ggtcttggct tcgcttcgcc
      421 cggggagttg tcggagattg atccgctcta cggaattgcc cagtagcttc gtgccgaaaa
      481 ggctgtgtgc tcattcgcta taatcctgac cagcgatgcg ctgcatgcgc ctgctattcg
      541 gagccagaga atgacgttcg acatccagga aatcctgggg tttcttcctc accgctaccc
      601 ttttttgctg atcgacagga ttgtcgaatt tgagcgcacc aagcgcctgg tagccatcaa
      661 aaacgtgacc atcaatgagc cgtttttcca gggccacttt cccggctacc cgatcatgcc
      721 gggcgtgctg gtggtggaag cgatggccca ggcgggcggc atcatcatca tgtatgagct
      781 gccggaccgc gaaaagaagc tggtggtatt tacgggcatc gagcgggcca agtttcgccg
      841 gccgattacg cctggagacc agatccgtct cgaagtggat gtgctgtcgt tccggccccg
      901 cgccgggcgc atcgagggca aggcgtatgt agacggcaag ctggcctgcg aggcgacgtt
      961 gacctgccag gtggtcccgc gcgtgcggga gccgcgagcc gtcgaggtgc cagccccgat
     1021 gacagacgcg caggtcgcgg cggaggcagc ggcggcggcg gtggtgtcgg agaccgagtg
     1081 agcgtccatc ccagcgcgat tatcgccccg ggcgcggtcg ttcctgagtc ctgcacggtc
     1141 ggtccgtatt ccacgatcgg accagatgtg gtgctgggcg aaacctgcac gctgatctcg
     1201 catgtcgttc tggatggccg gacgcggatt ggggcgcgca acaccatctt tcctttcgcc
     1261 tcgattggtg tggcgccgca ggacctgaag tatgccggcg agccgaccga gactgaggtc
     1321 ggcgacgaca acaccatccg cgagtgcgtg acgatcagcc gcggcacgaa caagggcggg
     1381 ggcatgacgc gggttggttc cggctgcctg ctgatggcct acgtacacat cgggcacgac
     1441 agccatgtgg gcaaccactg cattctggcc aactgcgcga cgctggcggg tcatgtgatc
     1501 attgaggact atgccagcgt gggcgcgttc tgcccggtgc accagttctg cacggtaggc
     1561 caatatgcct ttatcggcgg gggcacgatc gtgacccagg atgtgttgcc gttttcgctg
     1621 acgtcatcgc ggcgggagaa caaggcattc gggatcaaca aggtcgggtt gagccgcagg
     1681 ggctttacgc cggaacgact gagcacgctg cagaaggcgt tccggctgct gctggcggcg
     1741 aagatgaa
//
LOCUS       DATAVD010000468         2414 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3207830, whole genome shotgun sequence.
ACCESSION   DATAVD010000468 DATAVD010000000
VERSION     DATAVD010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2414
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3207830"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..611)
                     /locus_tag="VHX39_08685"
     CDS             complement(<1..611)
                     /locus_tag="VHX39_08685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0019700 - organic phosphonate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate 5-phosphate
                     C-P-lyase PhnJ"
                     /protein_id="HEX3991234.1"
                     /translation="MKGYNFAYLDEQTKRMIRRALLKAVAIPGHQVPFGSREMPLPYG
                     WGTGGIQVTASVLGQDDTLKVIDQGADDTTNAVSIRQFFARTAGVRTTTHTAEATVIQ
                     TRHRIPEETLRENQIIVYQVPQPEPLYRLEPSRVETKRMHALSDYGLMRVKLYEDVAR
                     LGQISISYDYPVMVNERYLMSPSPIPAFDNPKMHQMAALQLFGA"
     gene            complement(697..1776)
                     /locus_tag="VHX39_08690"
     CDS             complement(697..1776)
                     /locus_tag="VHX39_08690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-phosphorus lyase complex subunit PhnI"
                     /protein_id="HEX3991235.1"
                     /translation="MAYVAVKGGERAIRNAHTWLAEERRGDPSVPDLALDQIREQLGR
                     AVDRVMAEGSLYDPDLAALAIKQAQGDLIEAAFLLRAYRTTLPRFAHARPVDTGAMRA
                     SRRISAIFKDLPGGQTLGPTYDYTHRLLDFELAENQPPPDAPRAAPGLSPVPRVPDIL
                     GREGLLEADGPADTEPGDLTREPLSFPASRDVRLQALARGDEGFLLAMGYSTQRGYGG
                     SHPFAGEVRMGEVSIEIEPPELGFAIDIGDLTVTECQMVNQFKGSKTQPPQFTRGYGL
                     VFGFSERKAMSMALVDRALRAEELGEDVTAPAQNAEFVLYHSDNIEATGFVEHLKLPH
                     YVDFQSELQNVRRLREAVEQREAAE"
     gene            complement(1781..>2414)
                     /gene="phnH"
                     /locus_tag="VHX39_08695"
     CDS             complement(1781..>2414)
                     /gene="phnH"
                     /locus_tag="VHX39_08695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnH"
                     /protein_id="HEX3991236.1"
                     /translation="RRESRRHPRRVLRNAEHAVMTLGLEAGFADPVADAQQCFRAVLD
                     AISHPGRITRAAGVTAPAPLSTAAAAVVLTLVDHETPLWLDPEAAIARQWIEFHCGAQ
                     VVTDPGKCSFALAMNLPPLHRFPTGSHESPETSATVICQVNGFDSGTAYRLHGPGLRE
                     PFLLNVAGLPPGFASIWQRNHRLFPCGIDLILCADDRLVAFPRTVTIQEV"
BASE COUNT          479 a          765 c          728 g          442 t
ORIGIN      
        1 gcgccaaaca actgcaacgc cgccatctga tgcattttcg gattatcaaa cgccggtatc
       61 gggctcggcg acatcagata ccgctcgttg accatcacgg gataatcgta gctgatcgaa
      121 atctgcccga gccgcgccac atcctcatat agtttcacac gcatcaaccc ataatccgat
      181 aacgcatgca ttcgtttcgt ttccacccta ctgggctcca ggcgatacaa cggctccggc
      241 tgcggcacct ggtaaacgat gatttgattt tctcgtaacg tctcttcagg gatgcgatgc
      301 cgggtctgga tgacggttgc ctctgccgtg tgcgttgtcg tgcggacgcc agccgtgcgg
      361 gcgaaaaact gtcggatcga caccgcgttc gtcgtgtcgt cggcaccctg gtcgatcacc
      421 ttcaaagtgt cgtcctgccc cagtaccgac gcggtaacct gaatgccgcc ggtgccccag
      481 ccataaggca acggcatctc ccgcgagcca aacggcacct gatggcccgg gatcgccacg
      541 gccttcagca gcgcgcggcg gatcatacgt ttggtctgtt catccagata agcgaaattg
      601 tagcccttca tgaacgttgc tccaacgagc aatccacccg gctccgcgtc atggaccggc
      661 ttgtccctgc cacgacgcag gttcgaacga acatggtcat tccgccgcct cccgctgctc
      721 gaccgcttcg cgcaggcggc ggacgttttg cagctcactc tggaaatcga cgtagtgcgg
      781 cagtttcaga tgttcaacga acccggtggc ctcgatgttg tcggagtgat acaaaacaaa
      841 ctccgcattt tgcgccgggg cagtcacatc ctcgcccagt tcctcggccc gaagcgcgcg
      901 gtctaccagg gccatcgaca tggctttgcg ttcggaaaat ccaaacacca ggccatagcc
      961 ccgggtgaat tgcggcggct gggttttcga gcccttgaac tgattgacca tctggcattc
     1021 ggtaacagtc aggtcgccaa tatcgatggc gaaaccaagt tccggcggct cgatttcgat
     1081 cgagacctcg cccatgcgga cctcgccggc aaacggatgg ctgccgccat agccacgctg
     1141 cgtcgagtag cccatcgcca gcaggaagcc ttcatcgccg cgcgccaacg cctgcaaacg
     1201 cacatcgcgg ctcgcgggaa agctcagtgg ttcacgggtc agatcgccag gttcggtatc
     1261 ggccgggcca tccgcttcca gcagtccctc gcgaccgaga atgtcgggca cccgcgggac
     1321 tggggaaaga ccgggagcgg cacgtggcgc atcgggcggc ggttgatttt cggctaattc
     1381 gaaatccaac aggcggtggg tatagtcata ggtcgggccc agggtctgcc cgcccggcag
     1441 gtccttgaaa atggccgaaa tacgccggga ggcccgcatc gcgccggtat cgaccggtcg
     1501 cgcatgggcg aatcgtggca gcgtggtgcg ataggcgcgc aacagaaacg ccgcctcgat
     1561 caggtcgccc tgcgcctgct tgattgccag cgccgcaaga tccggatcgt aaagcgaccc
     1621 ctcagccatc acacgatcga cggcgcggcc cagttgctcg cggatttgat ccagggcgag
     1681 gtcggggaca ctgggatcgc cgcgccgttc ctcggccagc caggtgtgtg cgttacggat
     1741 tgcgcgttca ccgcctttga ctgcgacata ggccatggct tcagacctcc tggatcgtaa
     1801 cggtgcgcgg gaacgcaacc aggcggtcat ccgcgcagag gatcagatcg ataccgcaag
     1861 gaaacagccg atggttccgc tgccatatcg atgcgaaacc cggtggcaac ccggcgacgt
     1921 tcaacaagaa aggttcacgc aaacccggcc catgcagccg gtaagcggtt ccgctgtcga
     1981 agccattcac ctgacaaatg accgtcgcag acgtttccgg cgactcatgc gaaccagtcg
     2041 ggaatcggtg cagcggcggc aggttcatcg ccaacgcgaa actgcatttg cctgggtcag
     2101 tcacgacctg ggcgccgcag tgaaattcga tccactgccg ggcaatcgct gcctcgggat
     2161 cgagccacag aggcgtttcg tgatcgacca aggtcagcac cacggcagcg gcggcggtgc
     2221 tcaaaggtgc cggcgccgtc acgcctgccg cgcgggtgat acggccggga tgcgagatgg
     2281 cgtcgagcac ggcgcggaaa cattgctgcg catcggcaac cggatcggca aagccggctt
     2341 cgaggcccag agtcatgacc gcatgttccg cattgcgaag aactcgacgc gggtggcggc
     2401 ggctttctcg gcgc
//
LOCUS       DATAVD010000469         7043 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3581944, whole genome shotgun sequence.
ACCESSION   DATAVD010000469 DATAVD010000000
VERSION     DATAVD010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7043
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3581944"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            183..1586
                     /locus_tag="VHX39_08700"
     CDS             183..1586
                     /locus_tag="VHX39_08700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HEX3991237.1"
                     /translation="MASRESAIERALTFFDGDGFRSRLAQLVAIPSTSQDPAHLPDVQ
                     RYLSDAIRPWLEQLGFTVAIHENPREGFGPILTAERIEHPGLPTILTYGHGDTVRGLE
                     EQWTPGLDPWTLTERGELWYGRGTADNKGQHAVNLSALEAVLEERAGKLGFNVKLVLE
                     TSEERGSTGLREFVAANRDMLAADVLIASDGPRVMPEVPTIATGTRGTYHFDLVVDLR
                     PGGVHSGHWGGLTTDPAVVLVSALGTIIDRHGKILVRDWLPRNGVPADVRAVLAGCPV
                     GGGGEAATIDPDWGEPGLTPAEKIYGWNSFIVLAMTSGRPEAPVNAVAPNARAHCQIR
                     YTVDTDPAGFGDAVRRHLDAEGFSNVRVENPGVRMPASRTDPSNPWVRWTVASMEQSL
                     GKRVQVIPNSSGGLPGDVFVDHLGTPLVWVPHSYNGCKQHGPDEHFLRAPAREGIAAF
                     AGLWWDLGQPGIPPHRP"
     gene            complement(1590..3371)
                     /locus_tag="VHX39_08705"
     CDS             complement(1590..3371)
                     /locus_tag="VHX39_08705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3991238.1"
                     /translation="MTTDTELTLPRLRGRPMAFLWRYIGLHPAGHATVLLTVLIAVSC
                     AVSTQFAMKHLIDVVSMGRQAGAAFVWTGFALLCALVAGDNLFWRVAGYTAHRTFVAV
                     TGDIRRDLFAYLSGHAPGYFNSRQPGGLASRISSSANNTFIVLNTTVWSVIPSAVAVG
                     LAIVFIGTVNVRLASGLMVLASLLGLIVFVLARRGTPRHRVFAEKAAGVDGELVDVIS
                     NFTVMRAFGATAREQARLERTMGVEMASRRHSLYYMEHLRLIHAVLTAFLTAGVVAVA
                     IKLWLAGQASVGDIALVTSLSFSILHGTRDLAVSLVDLTQYIVRLEEAIGALLQPREL
                     LDHPDANALPAGPREVTFEDVGFAYPGRAPVLQNFNLTLAPGQRVGLVGFSGAGKSTV
                     LSLLQRFHDVSSGRILIDGYDIRDMSKDSRQEALALVPQDISLFNRSVRENLCYARPD
                     ATDAEIMAAAETARCREFIEALPQGFDTVVGDRGVMLSGGQRQRLAIARALLKDAPIL
                     LLDEATSALDTESEQLIQAALDDLMKGRTVIAIAHRLSTLARFDRIIVMDHGQIIDDG
                     TPSALAHRPGPYRDLLNRQQMEFAEAA"
     gene            3648..4703
                     /locus_tag="VHX39_08710"
     CDS             3648..4703
                     /locus_tag="VHX39_08710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX3991239.1"
                     /translation="MRIAQISPLFEAVPPKLYGGTERVVYSLTEELVAMGHDVTLFAS
                     GDSITSATLAPMRDQALRLDPSVKDWVALYHRMVEMIYRRKDAFDVLHFHIDYFPLSL
                     FSRQNVPFLTTLHGRLDLPEFGEVYNTFRDAPFVSISDDQRTPIPALNWVRTVHHGMP
                     ANLLTPQPVKQEYAAVLGRISPEKGVDAAIRIAGRAGMQLKIAAKVDNADKEYYDTVI
                     KPMIRDNPFVEFIGEINDQQKPDFLSGAHALLFPIDWPEPFGLVMIEAMACGTPVIAR
                     RRGSVPEVIDEGVSGFIIDDEDDAVAATKRLHELDRAKVRATFDRRWTARRMAEDYLE
                     VYQELAHPVRRLRAVNG"
     gene            4894..5949
                     /locus_tag="VHX39_08715"
     CDS             4894..5949
                     /locus_tag="VHX39_08715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX3991240.1"
                     /translation="MRIAQISPLNEAMPPKLYGGTERVVSWLTEELVAMGHDVTLFAS
                     GDSVTTATLASMRDHAIRLDPTVKDPIALHYRMIEQVYRRKDEFDVLHSHLDYYPLSL
                     LTRQNVPYLTTLHGRLDLGDFVEIFGTFRDAPFVSISNHQRTPVPNLNWLRTVQHGVP
                     VNLLTPQPVRQEYVAALGRISPEKGFDKAIRIAAQAGIKLKIAAKVDNVDKEYYATVI
                     RPLIQDNPNVEFIGEINDQQKPAFLSGAHALLFPIDWPEPFGLVMIEAMACGTPVIAF
                     RAGSVPEVIDEGVTGFIVSDEAEAIAATRRLHELDRATVRATFERKWTARRMAEDYVE
                     LYQTLAARAWRLRAVAG"
     gene            6062..>7043
                     /locus_tag="VHX39_08720"
     CDS             6062..>7043
                     /locus_tag="VHX39_08720"
                     /inference="COORDINATES: protein motif:HMM:NF024241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3991241.1"
                     /translation="MVSLVLPANASATLHVGRTAVHALNFFVAAMQTGFGPFMSVWLV
                     SQGWSLTDVGVALSIGTVAGLVGQLPGGGLVDRMQRKRPIAAIAIAVVAVSALMIALT
                     PSIPAVWLAQVLHAIGSVIITPAIAALTLALCGPDSFSERLGGNARYAALGAALAAGA
                     FGLASTHLGEQSIFIITAALALPAIASLFAIRQGASPPTPAEHMALAHPKDRDTAPWT
                     IFRDPTMHIFAVCLILFHLSNATLLPLALGALSQRGEASGYVVPAAIIVPQLITMIAS
                     PWAGAMARIVGRRKVLLVGFIALPARAVLFAFNPGPEAVDAIEVLDGVSAT"
BASE COUNT         1303 a         2299 c         2198 g         1243 t
ORIGIN      
        1 tcggccatgt cacccgtggt atgcgccgat gccgcgcgtc atatcgccgc gccgccgtgc
       61 tcaacgccga cagttcccgt tccagcgctt ccctcatcgc cgccccctcc cctgggcctg
      121 cccagaatag cgcgcgcgga aacgagtggt agagtggccc ggcaaatcag gcggagcggc
      181 acatggcatc ccgggaaagc gcgatcgaac gcgcgctgac gttcttcgac ggtgacgggt
      241 ttcggagcag gcttgcgcag ttggtggcaa tccccagcac ctcgcaggac ccggcccact
      301 tgccggacgt gcagcgctac ctgagcgatg ccattcgccc ctggctggag caacttggct
      361 tcaccgttgc catccacgaa aatccgcgcg aaggcttcgg cccgatactg accgccgaac
      421 ggatcgagca tcccggtttg ccaaccatcc tgacttacgg ccacggcgac actgtgcgcg
      481 gcctggagga gcaatggact ccgggcctcg acccctggac gctgaccgag cgtggggaac
      541 tttggtatgg ccgcggcacc gccgacaaca aaggccagca cgcggtcaat ctttctgccc
      601 tcgaggccgt gcttgaggaa cgcgccggca agctcgggtt caatgtaaag ctcgtgctgg
      661 aaaccagcga ggaacgcggc tccaccgggt tacgcgagtt cgtcgccgcc aaccgggaca
      721 tgctggccgc cgatgtgttg attgccagcg acggaccgcg cgtgatgcct gaggtgccga
      781 cgatcgccac cggcacgcgc ggcacctatc atttcgatct tgtagtggac ctcaggcccg
      841 gcggcgtgca ctccggacac tggggtggat tgaccaccga tccggccgtc gtgctggtct
      901 ccgctcttgg caccatcatc gaccgccacg gcaaaatcct ggtgcgggac tggttgccca
      961 ggaatggcgt accggccgat gtgcgcgcgg tgctggccgg ctgcccggtc ggcggcggcg
     1021 gcgaagcggc gacgatcgat ccggattggg gcgagcccgg cctcacgccg gcggaaaaga
     1081 tttacggctg gaatagtttt attgtgctgg cgatgacctc cggccggccg gaggcaccgg
     1141 tcaacgcggt ggccccgaat gcccgcgcgc attgccagat ccgctacacg gtcgataccg
     1201 accctgccgg gtttggcgat gcggtgcgac ggcatcttga cgccgaaggt ttttccaatg
     1261 tgcgggtcga aaacccgggt gtgcgcatgc cggcgagtcg gaccgatccg tcaaacccct
     1321 gggtacgctg gaccgtggca agcatggagc aatcgcttgg caagcgcgtg caggtgatcc
     1381 cgaactcatc gggcggtctg cccggcgacg tgttcgtcga tcatctcggc acgccgctgg
     1441 tctgggttcc ccacagctat aatggatgca aacagcacgg acctgacgaa cattttctgc
     1501 gtgccccggc gcgcgagggc atcgcggcgt ttgccggatt gtggtgggat ctcggccaac
     1561 ccgggatccc accgcaccgc ccgtgaccgc tacgccgcct cggcaaactc catctgttgc
     1621 cggttgagca gatcccgata cggcccagga cggtgggcca gagcagaggg ggtgccgtcg
     1681 tcgataatct ggccgtgatc catgacgatg atccggtcga accgcgccaa cgtcgacaaa
     1741 cggtgcgcga tcgcgatgac tgtgcggcct ttcatcagat cgtccaacgc tgcctggatc
     1801 agttgctccg attcggtatc cagcgcactg gtcgcctcgt ccagcaacag gatcggcgcg
     1861 tccttcaaca gcgcccgggc aatcgccagc cgttgccgct gcccgcctga cagcatcaca
     1921 ccgcggtcgc cgaccaccgt gtcgaagcct tgcggcagcg cctcgatgaa ttcgcggcaa
     1981 cgagcggttt cggcggcggc catgatctcg gcgtcggtcg catccgggcg ggcgtaacac
     2041 aggttctccc gcaccgagcg gttgaacagc gagatatcct gcggcaccag cgccagcgct
     2101 tcctgccggc tgtccttgct catgtcacga atatcgtagc catcgatcag gatgcgtccg
     2161 ctgctgacat cgtggaagcg ttgcagcagc gacagcactg tggatttgcc ggcgccggaa
     2221 aagcccacca gaccgacgcg ttggcccggg gccaaagtca gattgaagtt ttgcagcacc
     2281 ggggcgcggc cgggataggc gaagccgaca tcctcaaagg tcacctcacg cggcccggcc
     2341 ggcagcgcgt tggcgtccgg atgatccagc agctcccgcg gttgcagcag ggcgccgatc
     2401 gcctcctcca gacgaacgat atattgcgta aggtcaacga gcgacacggc aagatcgcgc
     2461 gtgccatgca gaatgctgaa cgacaaggaa gtaaccagcg cgatgtcacc gacgctcgcc
     2521 tggccggcaa gccacagctt gattgccacg gccaccacgc cggcggtcag gaatgccgtc
     2581 agcacggcat ggatcagccg tagatgctcc atataataga gactgtggcg gcggctggcc
     2641 atttccacgc ccatcgtccg ctccagccgc gcctgctcgc gcgccgttgc gccaaacgcg
     2701 cgcatgacgg tgaagttgga gatcacgtcg accaattcgc catcgacccc ggcggccttt
     2761 tcggcaaaca cccggtgccg cggcgtgccg cggcgtgcca gcacgaagac gatgagaccc
     2821 agaagcgagg ccaacaccat cagtcccgaa gcgagcctga cgttgaccgt accaatgaag
     2881 acaatcgcca agccaaccgc aaccgccgac ggaatgacgc tccacaccgt ggtgttgagc
     2941 acaatgaacg tgttgttggc agaggagctg atccggctgg ccagcccgcc cggctggcgc
     3001 gaattgaagt accccggcgc gtggcccgac aggtaggcga acaggtcgcg gcggatgtca
     3061 ccggtcacgg cgacgaacgt gcgatgcgcc gtgtagccgg cgacccgcca aaacagattg
     3121 tctcccgcga ccaaagcaca tagcagcgcg aagccggtcc atacgaaagc cgcccccgcc
     3181 tgccgaccca tggagacgac atcgatcagg tgcttcatcg cgaattgtgt tgagacggcg
     3241 caactgacgg cgatcagcac ggtgaggagc acggtcgcat gtccagcggg atgcaggccg
     3301 atgtaacgcc acagaaaggc catcggtcgc ccacgcaatc tggggagcgt aagttcggta
     3361 tcggtcgtca ttcggagctc cggacggtgc gcctcgcgga gatgggcaat tcccatcggg
     3421 ctggcttacc gatgccaata caaggcgcaa ataatggcag cttagaggca ccatggaggc
     3481 cgaaatcgga agatttttgc cgccccggac ggtctggccg aaatgaacgc aaacgtgccg
     3541 aaatcgcgcc atattcacag tccacaacct ggaaccagtc agcgaccccg ggagttcacc
     3601 ggggccagcc gaccaaaccc tggccgactg aaccgaggca tacccccatg cgtatcgcgc
     3661 aaatttctcc gttgtttgag gccgtgccgc ccaagctcta tggcggcacc gagcgcgttg
     3721 tctattccct gaccgaggaa ctggtggcga tggggcatga cgtgaccctg tttgccagcg
     3781 gtgattccat cacttcggcg accctggcac cgatgcggga ccaggcactg cggctcgatc
     3841 cgtcggtgaa ggactgggtc gcgctgtacc atcgcatggt cgagatgatc taccgccgca
     3901 aagacgcctt cgatgtgttg cacttccaca tcgactattt cccgctgtcg ctgttcagcc
     3961 ggcaaaacgt gccgtttctg accacactgc acggacggct cgacctgccg gagttcggtg
     4021 aggtctacaa cacattccgc gatgcaccgt tcgtctcaat ctccgacgat cagcgcacgc
     4081 cgatcccggc actgaactgg gtccgcaccg tgcatcacgg catgccagcc aatctgctga
     4141 cgccgcagcc ggtgaagcag gaatacgccg ctgtgcttgg ccgcatttca cccgagaaag
     4201 gtgtcgacgc ggcaatccgc atcgccggtc gcgccggcat gcaactgaag atcgccgcca
     4261 aggtcgataa cgccgacaag gaatactacg ataccgtgat caaaccgatg atccgggaca
     4321 accccttcgt tgagttcatc ggcgagatca acgaccagca aaagcctgac ttcctgtccg
     4381 gcgcgcatgc tctgctgttc ccgatcgact ggccggagcc cttcggcctc gtgatgatcg
     4441 aagcgatggc ctgcggcacg ccggtgattg cgcgccgtcg cggctcggtg cccgaggtga
     4501 tcgacgaagg cgtctccggg ttcattatcg acgacgagga tgacgcggtc gcggcgacca
     4561 agcgcctgca cgaactcgac cgggcgaagg tacgtgccac cttcgaccgg cgctggacgg
     4621 ctcggcggat ggccgaggac tatctcgaag tctaccagga actggcccac ccggtacgcc
     4681 ggctgcgcgc cgtcaacggc tgagccaaac gttaagcgac caaaacgagg ccgttcccgt
     4741 gcgcgtcgcg gggacggctc cttcgacggt gacgcaatcg acctcgtgac gaacatgggg
     4801 atcggggcag gcacgacccg gacagcccat tcgacccgaa acagcacacg ccagtgaagc
     4861 gccaccggat cgatcgatgt cggagaccac gccatgcgga ttgcacaaat atcgccattg
     4921 aatgaggcca tgccgcccaa actttacggc ggcaccgagc gggtggtgtc gtggctgacc
     4981 gaggaactgg tggccatggg ccacgacgtc accttgtttg ccagtggcga ctcggtcacc
     5041 acggcgacgc tggcatcgat gcgggatcac gcgatccggc tcgatccgac agtgaaggac
     5101 ccgatcgccc tgcactaccg gatgatcgaa caggtgtacc ggcgcaagga cgagttcgac
     5161 gtactgcatt cgcacctcga ctattatccg ctgtcgctgc tgacccggca gaacgtgccc
     5221 tatctgacga cgttgcacgg gcgtctcgat ctcggcgatt tcgtggaaat cttcggcaca
     5281 ttccgggatg cgccgttcgt gtcgatctcg aaccaccaac gcacgccggt gccaaacctg
     5341 aactggttgc gcacggtgca gcatggtgtg cccgtcaact tgctgacgcc gcagccggtc
     5401 aggcaggaat acgttgccgc tctcggccgc atttcgccgg agaagggttt cgacaaggcg
     5461 atccgtatcg ccgcccaggc gggcattaag ctgaagatcg ccgccaaggt cgataacgtc
     5521 gacaaggaat actatgcgac ggtgatccgg ccgctgatcc aggacaatcc caacgtcgag
     5581 ttcatcggcg agatcaacga tcagcaaaag ccggcgtttc tctccggcgc gcacgctctg
     5641 ttgtttccga tcgactggcc ggagccgttt ggcctcgtca tgatcgaggc aatggcgtgc
     5701 ggcaccccgg tcattgcgtt ccgcgccggc tcggtgcccg aggtcatcga cgagggtgtg
     5761 accgggttca tcgtttccga tgaggccgag gcgatcgccg ctacccgccg cctgcatgaa
     5821 ctggatcggg ccaccgtgcg ggcaactttc gaacggaaat ggaccgcacg ccgcatggcc
     5881 gaggactatg tcgaactcta tcagaccttg gctgcccggg cctggcggtt gcgcgcggta
     5941 gccgggtgat ccgcctcacg tctgccgcgg acgcctaatc ggtgagtgta cccgtcttcc
     6001 atctggtata gagcgttcgt ggccacctgg cccgcgtgtc caccggaatg gagctgacgg
     6061 cttggtttca ctcgttttgc cggcaaatgc ttcggccacg cttcacgtcg gtcgcactgc
     6121 ggttcacgca ttgaacttct tcgtggccgc gatgcagacc gggttcggcc ccttcatgtc
     6181 ggtctggctg gtcagccaag gttggtcgct gaccgacgtg ggcgttgccc tcagcatcgg
     6241 cacggtcgcg ggtctggtcg gacaattgcc gggcggtggt ttggtcgacc ggatgcaacg
     6301 caagcgaccc atcgccgcaa tcgccatcgc agtcgttgcg gtcagtgcgc tgatgatcgc
     6361 cctcacccct tcgatccccg cggtctggct cgcgcaagtc ctgcacgcca tcggcagcgt
     6421 catcatcaca ccggccattg cagccctgac attggcgttg tgcggccccg acagcttcag
     6481 cgaacggctt ggcggcaatg cgcgctatgc tgctttggga gcagcactcg cggccggcgc
     6541 attcggcctc gcctcgaccc acctgggcga gcaaagcatc ttcatcatca ccgccgcttt
     6601 ggcgctgccg gcgattgcgt cgctgtttgc gatccgacag ggcgcctccc cgcccacgcc
     6661 ggcggagcac atggcgctgg cgcacccaaa agatcgtgat acggcgccct ggacgatttt
     6721 ccgcgacccg acgatgcaca tcttcgcggt ttgcctgatt ttgttccatt tgagtaatgc
     6781 caccctgttg ccgctggcat tgggcgcatt gtcgcaacga ggcgaggcct ccggctatgt
     6841 cgtccccgcc gccatcatcg taccccagct catcaccatg attgcctcgc cctgggccgg
     6901 cgcaatggcg cgcatcgtgg ggcggcgcaa ggtgctgctg gtcggcttca ttgcgctgcc
     6961 ggcgcgtgcc gtgctgttcg cattcaatcc cggccccgaa gcagtagatg cgatcgaggt
     7021 cctggatggt gtgagcgcca cag
//
LOCUS       DATAVD010000470         2625 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3582025, whole genome shotgun sequence.
ACCESSION   DATAVD010000470 DATAVD010000000
VERSION     DATAVD010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2625
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3582025"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1110)
                     /locus_tag="VHX39_08725"
     CDS             complement(<1..1110)
                     /locus_tag="VHX39_08725"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX3991242.1"
                     /translation="MLAIEAKPPGEESWRYHQSMTFEVGQVVGEYKIVRVLGRGGLGA
                     VYEAVHLISQRAEAMKVMLPEQTGTPDMKERFRREIQLLASLNHPNIAGLHNAFYFDD
                     QLVMIMELVEGEDLRTRSRSTRIPLPMLMNYSLQVLAALDYAHARGVVHRDIKPANIM
                     VSPAGLVKVLDFGIAISEGSVELTKAGSLIGSPLHMSPEQIRGEKATQQSDIYSLGVT
                     LYELIAGRPPLTGNTTYELMMAHLSRTPTPLAGLRPDIPASLSDMIARALEKEPAKRF
                     ATAGEFLEALRSQNMPDLAGTTTMLTPTRALQEVTTGKGSQPITGPLAPPVDQLVRHL
                     ASFIGPIAKVVVTRLTKQYTDLDQLYLEASKQIEKD"
     gene            1164..1553
                     /locus_tag="VHX39_08730"
     CDS             1164..1553
                     /locus_tag="VHX39_08730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011617861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4280 domain-containing protein"
                     /protein_id="HEX3991243.1"
                     /translation="MPLQVCMGAMMQCSFGVAPSSLVVLPTNRVMTNMVPDANIMDHI
                     PMVNIMPFGMCTSIANPTVAAATAAALGVLTPMPCIPATPAPWVAGAPTVLLGNFPSL
                     DNVSQLMCMWAGVITFVDAGEATVQIP"
     gene            1656..2420
                     /locus_tag="VHX39_08735"
     CDS             1656..2420
                     /locus_tag="VHX39_08735"
                     /inference="COORDINATES: protein motif:HMM:NF033484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HEX3991244.1"
                     /translation="MTQLATLSLAFAAATDTGCKRTNNEDSFGYNTDPHLYVVCDGVG
                     GALAGEVASNTAVRTFIESFEAQTRLRESPIESRLLHSIEDANRAVRDLSTNNEQFSH
                     MGTTLVCACVDGARAVIGNVGDSRAYLIRDGACFQITQDHSLVEEQVQNGMLTQEMAE
                     NSSLRSVITRAIGMADTVQPDFFGATLQAEDMLLLASDGLTRYLTPPEIAAIALAGVD
                     LPVICKEFVECAKQRGGADNITCIVLRASMGPATGS"
BASE COUNT          503 a          794 c          782 g          546 t
ORIGIN      
        1 gtctttctca atctgcttgg acgcttccag gtacagctgg tcgagatcgg tgtactgctt
       61 ggtaagccgc gtcacgacaa ccttggcgat cggcccaata aaagaagcca ggtgccgcac
      121 cagctggtcg accggcggag cgagaggccc ggtgatgggt tggctgccct tgccggtcgt
      181 cacttcctgt aaagctcgtg tcggggtgag catggtcgtg gtcccggcca ggtccggcat
      241 gttctgagag cggagcgcct cgagaaactc cccggcggta gcgaagcgct ttgctggttc
      301 cttttccaag gccctggcaa tcatgtccga cagactcgct ggaatgtcag gccgcaaccc
      361 ggcaagaggg gtgggcgtcc ggcttaggtg agccatcatc aactcatagg tggtgttgcc
      421 ggtcagcggt gggcggccgg cgatcagctc atacagggtt acgccaagag agtagatatc
      481 cgactgctgc gtggcctttt caccacggat ttgttccggc gacatatgca agggcgaacc
      541 gatcagagag cccgccttgg tcagttccac cgagccctcc gagatggcaa tgccgaagtc
      601 cagcactttc accagcccgg caggagagac catgatattt gccggcttta tgtcgcggtg
      661 caccacgccc cgggcatggg cataatcgag ggcggccagc acctgcaggg aataattcat
      721 cagcatgggc agcggaatgc gggtactccg gctgcgcgtg cgcagatctt ccccttccac
      781 cagctccatg atcatgacga gctggtcgtc gaagtagaag gcgttgtgca ggccggcgat
      841 gttcggatga ttgaggctgg ccagtagctg gatctcgcgg cgaaaacgct ccttcatgtc
      901 cggagtgccg gtctgctccg gcaacatcac cttcatggct tccgcgcgct gcgagatcag
      961 atggactgct tcataaaccg cgcccaggcc gccacggccc agtacccgca ctatcttgta
     1021 ttccccgact acctgcccca cctcaaacgt catcgactga tgataccgcc agctctcttc
     1081 cccgggcggc ttggcttcta tcgccagcac ttccggcgta cactcggttg tacatttcaa
     1141 agcccctgtg aaggagccga atcttgcctc tacaagtctg tatgggagcg atgatgcaat
     1201 gtagcttcgg cgtggcgccg agttcgctgg tggtgttgcc taccaacagg gtgatgacca
     1261 acatggtgcc ggatgcgaat atcatggacc atattccgat ggtcaacatc atgcctttcg
     1321 ggatgtgcac gtcgatcgcc aacccgactg tagccgcggc cacggcggct gctctgggtg
     1381 tgctcacacc gatgccttgc atcccggcga cgcccgcccc ctgggtcgct ggtgcaccca
     1441 cggtgctgct gggcaacttt ccttccctcg ataacgtctc gcaactgatg tgtatgtggg
     1501 ccggtgtgat taccttcgtc gatgccggtg aggcgacggt tcagataccc taggccaacg
     1561 cccgtctacg ctcgttctct gcgttgtctg ggtcgatttc ccatgcaaaa gggccagctt
     1621 cctgttaatt ttgctccgcc agtacatttg acaccatgac tcaattagcc acactgtccc
     1681 tggcatttgc ggcggcgacc gacaccggct gcaagcgcac taataatgag gatagtttcg
     1741 gctacaacac cgatccgcat ctctacgtcg tctgcgatgg tgtgggcggt gcgctggcag
     1801 gcgaagtggc cagcaatacc gcggtgcgca ctttcatcga gtcgttcgaa gcgcaaaccc
     1861 ggctgcggga atcgccgatc gagagccggt tgctgcactc cattgaagac gccaatcgtg
     1921 cggtgcgcga cctctccacc aacaacgaac agttcagcca tatgggcaca accctcgtat
     1981 gcgcttgtgt tgacggagct cgtgcggtca tcggcaatgt gggcgacagc cgcgcttatt
     2041 tgatccgcga cggcgcgtgc ttccaaatta cccaggacca ctccctggtc gaggagcagg
     2101 tgcaaaacgg gatgctcacg caggagatgg cggagaattc cagcctgcga tcggtgatca
     2161 cccgggccat cggcatggcg gataccgtgc agccagactt ttttggcgcg acgctgcagg
     2221 cagaagatat gctgctactg gcctcggacg gtcttacccg ctatttgacg ccgccggaaa
     2281 tagccgcaat cgcactcgcc ggggttgacc tgcccgtgat ctgcaaagaa tttgtggagt
     2341 gcgccaagca gcgcggcggt gcggacaata ttacatgcat tgtgttgcgc gcctctatgg
     2401 gaccggccac ggggtcctga aggtgcgtaa agcacgcagc ctctccagtc ccgtagggac
     2461 tcgattggct gccgtcgagt tttccgctgg gcagctcact tggtgactgg gttgacgcag
     2521 gagcctccgt acaaacccag aggcgccaac accgcagctc caggacctga aatctcaaag
     2581 cgaaccactt ccggagtccc atccgacagc ctgagctggc ggccg
//
LOCUS       DATAVD010000471         2485 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_45108, whole genome shotgun sequence.
ACCESSION   DATAVD010000471 DATAVD010000000
VERSION     DATAVD010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2485
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45108"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(194..1357)
                     /locus_tag="VHX39_08740"
     CDS             complement(194..1357)
                     /locus_tag="VHX39_08740"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3991245.1"
                     /translation="MKASLFYLPSIGSRGEIEAGMAAMRPELYQRMLAELSEQIRMAD
                     DLGYDSVSFTEHHFHIEGFEVSNNPVLLDLYFAMQTKRIRVGQLGIVLPAANPIRVAE
                     DIAMLDHMTGGRANAGFARGYQRRWVDIMAQQTHGISGALPHQHDAIDAANRAAFEEN
                     FQIIKKCWTQEMLTHDGQFWKVPAGETPWTLDTTAKYGKGVENGILKAVGVVPKPLQK
                     PHPPVFLPFASSENSIRWAAKEGVTAILPAMLPVYENHLYDVYAEVSGRPRGHGTGLL
                     RDVIIADTDEEAMALWRDSGQFSGRAWFEPFGFRRGMQDPKTGSFLTPEEAVREGYIL
                     AGTVDTVIRGVEANMKRQNVDWVFCYTYNSLIPHAKLMTSIERFYTEVMPRFG"
     gene            complement(1379..2431)
                     /locus_tag="VHX39_08745"
     CDS             complement(1379..2431)
                     /locus_tag="VHX39_08745"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3991246.1"
                     /translation="MMKVNGCACCDVGVLGRRGLLTGASALGAAGLFGSASAAEKPFR
                     IDVHHHIAPPAWVAALKAAKLDSPPVTNWRPEQSIEDMDKGGVATAMTSPTLPQVSFL
                     GAADAARVARSSNEYARKLADDHPGRFGMFAMLPMPHIDESLKELAYALDTLHADGIG
                     MMTDYGDKWLGYPEFQPVFDELNRRKAVVYTHPTTPNCCVNLAQDVPDVAVEYGADTT
                     RTIVNLIFSGASQRYQDISFIFSHGGGVLTAVAERLQIQMERLPQFKGKITHDMVQHE
                     LNRFFYETAQVANAVTIEALAHLVPTTQIVFGSDFPYRTSAETVVGLDHHFKGKLLRE
                     IGRDNVARILPAVRQM"
BASE COUNT          438 a          782 c          757 g          508 t
ORIGIN      
        1 aaagccgtcg cgggaattgt cgccgccaat cgcgatcata ttcgtcgatg ggtgcatgat
       61 gccaacgaag cattgttggc ggaaccaatc gcggcctaag gttggcggaa tatctgtttc
      121 ttgtacagcg actacaacag ctcgcgctcc cgtctacctc ttttggaaag atttgagagc
      181 gcgagttggc actctaccca aaccgaggca tcacctcagt ataaaaccgt tcgatcgacg
      241 tcatcagctt cgcgtgcgga atcagtgaat tgtaagtata gcagaacacc caatcgacat
      301 tctgtcgctt catgttcgcc tccaccccgc ggatcaccgt atcgacggtt cccgccagga
      361 tatagccttc ccgaaccgct tcctccggcg tcaggaatga ccccgtcttc gggtcctgca
      421 tcccccgccg gaacccgaac ggttcgaacc acgcccgtcc ggagaactgg ccggaatccc
      481 gccatagggc catcgcctcc tcatcggtat cggcgatgat cacatcgcgc agcagcccgg
      541 ttccgtggcc gcgcgggcgt ccggagacct cggcgtacac atcgtagagg tggttttcgt
      601 ataccggcag catcgcgggc aggatggcgg tcacgccctc tttcgcggcc cagcgaatgg
      661 agttttccga tgacgcgaac ggcaggaaga ccggcggatg cggcttctgc aacggcttcg
      721 gtacgacgcc gaccgccttg agtatgccgt tctccacgcc cttgccatat ttcgctgtcg
      781 tatccagcgt ccatggcgtt tcccccgccg gcaccttcca gaactggccg tcgtgggtca
      841 gcatctcctg cgtccagcat ttcttgatga tctggaagtt ctcctcgaac gccgctcggt
      901 tggcggcgtc gatggcgtcg tgctgatgtg gcagcgcgcc gctgatgccg tgcgtctgct
      961 gcgccatgat atccacccag cgccgctggt agcctcgggc gaatccggcg ttcgctcggc
     1021 cgccggtcat gtggtcgagc atcgcgatat cctcggcgac gcggatcggg ttggccgccg
     1081 gcaaaacgat gcccaactgc ccgacccgta tccgtttcgt ctgcatcgcg aaatacagat
     1141 cgagcagcac cgggttgttg gagacctcaa acccctcgat atggaaatga tgttcggtga
     1201 agctgaccga gtcgtatccc agatcgtccg ccatccggat ctgttcggac agttccgcca
     1261 gcatccgctg atagagttcg ggccgcatgg ccgccatgcc ggcctcgatc tccccacggc
     1321 taccgatact gggcagataa aacagcgatg ccttcacggg ttttgtctcc tgatccagtt
     1381 acatctgccg cacggccggc aggatcctgg ccacgttgtc gcggccgatc tcgcgcagca
     1441 gcttaccttt gaaatgatgg tccaggccga ccacggtctc ggccgaggtg cggtagggga
     1501 agtccgatcc gaacacgatt tgcgtcgtgg gcaccaggtg cgccaaggcc tcgatcgtga
     1561 cggcgttggc gacctgggcc gtctcgtaga agaaccggtt cagttcgtgc tgcaccatgt
     1621 catgggtaat cttgcctttg aactgcggca gccgctccat ctggatttgc agccgctccg
     1681 ccaccgctgt cagcacgccg ccgccgtggg agaagatgaa gctgatgtcc tgatagcgct
     1741 gcgacgcgcc ggagaagatc aggttgacga tggtgcgggt ggtatccgcg ccatactcca
     1801 ccgcgacgtc gggcacatcc tgcgcgaggt tcacgcagca gttcggtgtc gtcgggtggg
     1861 tgtagacgac ggccttgcgg cggttcagtt cgtcgaatac cggctggaat tcggggtagc
     1921 cgagccattt gtcgccgtaa tcggtcatca tgccgatgcc gtcggcgtgc agggtgtcga
     1981 gggcgtaggc aagttccttc aggctctcgt cgatatgcgg catcggcagc atggcgaaca
     2041 tgccgaaacg gccgggatga tcgtcggcca gtttgcgggc atattcattg gacgatcggg
     2101 cgacccgagc ggcgtcggct gccccgagga aactgacctg cggcaaggtc gggctggtca
     2161 tggcggtggc gacgccgcct ttgtccatgt cctcgatcga ttgttccggg cgccagttgg
     2221 tcaccggcgg cgaatcgagc ttcgcagcct tcaaggcggc gacccaggcg ggtggcgcga
     2281 tgtgatgatg cacgtcgatc cgaaacggtt tctcggccgc cgatgccgaa ccgaaaagcc
     2341 cggccgcgcc aagggctgaa gcccctgtca acagtccacg ccgccccagg acgccgacat
     2401 cgcagcaggc gcagccgttt accttcatca taattgtttc ccccattgcc gccggcggtt
     2461 gttccgccgg tcaggtttgc ccggc
//
LOCUS       DATAVD010000472         2906 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_974380, whole genome shotgun sequence.
ACCESSION   DATAVD010000472 DATAVD010000000
VERSION     DATAVD010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2906
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_974380"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..2051)
                     /gene="tssI"
                     /locus_tag="VHX39_08750"
     CDS             complement(63..2051)
                     /gene="tssI"
                     /locus_tag="VHX39_08750"
                     /inference="COORDINATES: protein motif:HMM:TIGR03361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tip protein TssI/VgrG"
                     /protein_id="HEX3991247.1"
                     /translation="MATWVRDSAMMSMTSPLGDDALIPTKLVAEEAISQPFRFDITAV
                     SQNGVFDPNSLLNMPVCVKLQDTSGTSPTTVRYFHGIVQQVRPDGILRGATLVDEFQL
                     YALTVMPRLWFLGQTLDCRVYQDKSAKDILSAMFTDASLTDITFNVSGPATRPYTVQF
                     NESDYAFAHRLMEQEGWFYFFEHTADKHTLVIADQSSAFQTIPNATLHFAVNQTDLGG
                     IMDWKPPVRTVTGAFAMGDYDPENPGTKLYNQQNTLLKAGGASARDVYHWPALTPTSS
                     VVEGRAKFAQEAAEAATSLYNGSSHYGALVPGGKFTLTNTPAGPDDGSFTVRSVHHEI
                     EDSSWISSDGSVTYQNRFEAFKATLTWREPFATPHPRMEGVHSALVMGPQSSAASDIK
                     MQSGEEIYTDDLARVKVRFYWDWRAEATGSGSVWARVIQPWAGNGWGTQFIPRVGTEV
                     AVAFVDGNPDRPIVIGGLYNGVSAPIYAVADKTKSGIRTRSSLSGDTSSFNELTFDDK
                     AGSELIFTHAQKDLTTEVEHDESLTVDNCRVVLVKSDETITVKGKQTITVTKDHTFEV
                     TQGNFTSTIDQGNHDLKVSLGNITVKASAGSISMEAMQSITLKVGQNTLTIDQTGVTI
                     KGMMTSVQAQTQAELKGLMTSVSGSAMLTLKGGITMIN"
     gene            complement(2399..>2906)
                     /gene="rfaE2"
                     /locus_tag="VHX39_08755"
     CDS             complement(2399..>2906)
                     /gene="rfaE2"
                     /locus_tag="VHX39_08755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase"
                     /protein_id="HEX3991248.1"
                     /translation="AIASTERKVRELEEAKAQVEVWRGQGLRIGFANGCFDLIHPGHI
                     HLLTRARAGCDRLIVALNTDASVRRLKGPTRPVQNEEARAIVMASLSPVDMVMLFDDD
                     TPLELIRALRPEVLIKGADYTVDQVVGADLVQGWGGEVLLVELRDGHSTSGTIRRMAL
                     PEPAIATK"
BASE COUNT          504 a          898 c          884 g          620 t
ORIGIN      
        1 ttgcgcgttc caccaccgtg gcgaggtccg cgcccgcaag ttttgccagt gtgcctgcca
       61 tatcagttga tcattgtgat cccgcccttg agcgtcagca tggcgctgcc gctgaccgaa
      121 gtcatcaggc ctttcagttc ggcctgggtt tgcgcctgaa cgctggtcat catgcctttg
      181 atggtcacgc cggtctgatc gatcgtcagc gtattctgac cgaccttcaa cgtaatggac
      241 tgcatcgctt ccatgctgat gctgccggca gacgctttca ccgtgatgtt gccaagcgac
      301 accttcaggt catggttgcc ctggtcgatg gtcgaggtga agttgccctg ggtcacctcg
      361 aaggtgtgat ctttggtgac ggtaatggtc tgcttgccct tgaccgtaat tgtttcgtcg
      421 gatttgacca gcacaacgcg gcaattatcg acggttaacg attcgtcgtg ctcgacctcg
      481 gtggtgaggt ccttctgcgc gtgcgtaaaa atcagttcgc tgccggcctt atcgtcaaaa
      541 gtcaattcgt tgaagctgct ggtgtcgcca ctcaggctgg accgcgtgcg aatgccggat
      601 ttggtcttat cggcgaccgc ataaatcggc gccgagacgc cgttataaag cccgccgatg
      661 acgatcggcc ggtccgggtt gccatcgacg aaggccaccg cgacctcggt gccgacccgg
      721 ggaatgaact gcgtgcccca gccgttgccg gcccagggct ggatgacgcg agcccagact
      781 gagccggaac cggtggcctc ggcgcgccag tcccagtaaa atcgcacttt cacccgcgcc
      841 aggtcgtcgg tgtagatttc ctcgccgctt tgcatcttga tgtcggaagc ggcgctgctt
      901 tgcggtccca tcaccaatgc cgaatgcacg ccctccatcc tggggtgcgg tgtggcgaac
      961 ggctctcgcc acgtcagggt cgctttgaaa gcctcaaacc gattctgata tgtgacgctg
     1021 ccgtcgctgc tgatccacga actgtcttcg atttcgtggt gcaccgagcg caccgtgaaa
     1081 ctgccgtcat ccgggccggc gggcgtattg gtgagggtga acttgccgcc cggcacgagg
     1141 gctccgtaat gactgctgcc gttatagagc gacgtcgccg cttcggcggc ttcctgggcg
     1201 aatttcgcgc ggccctccac cacactgctg gtcggcgtca acgcaggcca gtgataaacg
     1261 tcgcgagcgc tcgcgccacc ggctttcagc agggtatttt gctgattata cagcttggtg
     1321 ccgggatttt ccggatcgta atcgcccatg gcgaacgcgc cggtgacggt gcgaaccggc
     1381 ggcttccagt ccatgatgcc accgaggtcg gtctggttga cggcaaaatg caaggtcgcg
     1441 ttgggaatgg tttgaaacgc cgagctttgg tcggcgataa ccagcgtgtg cttgtccgcg
     1501 gtgtgctcga aaaaataaaa ccagccttcc tgctccatca gccggtgcgc gaaagcataa
     1561 tccgattcgt tgaactggac cgtatacggt cttgtggcgg gccctgacac attgaaggtg
     1621 atgtcggtca ggctggcgtc ggtgaacatc gccgacagga tgtccttcgc cgacttgtcc
     1681 tgatagacgc ggcagtccag cgtctggccg agaaaccaca gccgcggcat cacagtcagc
     1741 gcgtagagtt ggaattcatc gaccagggtt gcgccacgca ggatgccgtc cggcctgacc
     1801 tgctgaacga taccgtggaa ataccgcacc gtcgtgggcg aggtcccgct ggtgtcctgc
     1861 aacttcacgc agaccggcat gttgagcagg ctgttcgggt cgaacactcc gttctggctg
     1921 accgcggtaa tatcgaaccg aaacggctgg ctgatcgctt cctcggcgac cagctttgtc
     1981 gggatcagcg cgtcgtcccc aagcggtgag gtcatcgaca tcatggcact gtcgcgaacc
     2041 catgttgcca tgcgtgttct gcctcagagg gtcagtgggt taaagggacg ttccccgcct
     2101 gtgggacagg tatcagattt gagtacgcgc tgtcgatagg tgaaacgaag acgccgggtt
     2161 tttaagggcc gatcgcctgg ccgttcagcg caggatcaat gaccgggaat cctcgccggg
     2221 tcgagtgcca atgctaattg ctgcaaagtt atccccgtcc cctcgtcatg ctcgggctcg
     2281 tcccaggcat ctggtggccc cggcactgcg ctgggggttc cctcattctt tccggctcat
     2341 gccgatgctc gggtcgagcc cgagcatggc ggcctggcat cgccggatcc gtgcggcttc
     2401 acttcgttgc gatggccggc tccggcaacg ccatgcgcct gatcgtcccg gacgtgctgt
     2461 gaccgtcacg cagctcgacc agcagcactt cgccgcccca gccttgcacc agatcggcgc
     2521 cgaccacctg gtcgacggta taatctgcgc ctttgatcag cacctccggc cgcagtgcac
     2581 ggatcagttc caacggggta tcgtcgtcaa acagcatgac catatcgacc ggcgacagtg
     2641 acgccatgac gatcgcccgg gcttcctcgt tctgcaccgg ccgcgtcggg cccttgagcc
     2701 ggcgcaccga ggcgtccgtg ttcagcgcca cgatcagccg gtcgcatccg gcacgcgccc
     2761 gggtcagcag atggatgtga cccgggtgaa tgaggtcgaa gcagccattg gcaaacccga
     2821 tccgcagccc ttgcccccgc cacacctcga cctgggcttt tgcctcctcc aactcgcgga
     2881 ccttgcgttc ggtggaggca atggcg
//
LOCUS       DATAVD010000473         4437 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3582571, whole genome shotgun sequence.
ACCESSION   DATAVD010000473 DATAVD010000000
VERSION     DATAVD010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4437
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3582571"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..577
                     /locus_tag="VHX39_08760"
     CDS             <1..577
                     /locus_tag="VHX39_08760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEX3991249.1"
                     /translation="VLFMTDWLHGVSPAWVALGAGIVCLLPGIGVLPANSLSEMNLGM
                     LVYMAGIFGVGAVIATSGLGSALSGALLQVAGMAPGHDALNLTLIAGIGAVIGFVTTL
                     VGMPVVLAPLAGDFAHASGLPVLTVLMLQIVIFSTVFLPYQNFLMVIGMQYGGVSLKA
                     GTRFCLTQAAVTVLVLCPLDYLWWWWLGYLP"
     gene            complement(668..1933)
                     /gene="tyrS"
                     /locus_tag="VHX39_08765"
     CDS             complement(668..1933)
                     /gene="tyrS"
                     /locus_tag="VHX39_08765"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEX3991250.1"
                     /translation="MTTAESAALSGDFLSEAAARGFIFQCTDQDALAEAMKSGPISAY
                     IGFDCTADSLHVGSLVQIMILRLLQKYGHKPVVLMGGGTTRIGDPSGKDESRQMLTDA
                     AIAANMAGIRRVFAPFLRFGEGTSDAMMVNNADWLDALSYIGLLRDVGTHFTINRMMT
                     FDSVKLRLDREQPMTFLEFNYMILQSYDFRELHRRHGVMLQIGGSDQWGNIVSGMDLT
                     RRSDGKHVFGLTTPLIATASGAKMGKTAAGAVWLTGDRVSAYDYWQFWRNTEDADVGR
                     FLRLFTDIPLPEIARLEALQGAEINEAKKLLATAATVLAHGQASAEAAAETARLAFEE
                     GEAADTLPSVALPRDELETGIAAFRLFTLAGLAASNGEARRLIRGGGARVNDTPVIEE
                     GALISLRDAKDGAIKLSAGRKQHRLVRAA"
     gene            1997..3079
                     /locus_tag="VHX39_08770"
     CDS             1997..3079
                     /locus_tag="VHX39_08770"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HEX3991251.1"
                     /translation="MPRTIGLMSGTSLDGVDAAWLETDGETVTAFGPTLTIPYDDALR
                     RDLRTVLDLAPGLAPGDLRVTSAEARLTEYHIQAVRALERPADLIGFHGQTILHQPDR
                     RRTWQIGDAGRLARETGVPVAYDFRSADVAAGGQGAPFAPALHAALARDLDRPLAVLN
                     IGGVANVTWIGEGGIDPSQALIAFDTGPGNGPLDDWMMRHTGQGFDRDGALSRSGTVS
                     AAVLSRLMADAYFARPVPKSLDRLDFSRTLVASGLDALAVADGAATLVAFTAASIAAA
                     AFPARPRRWLVTGGGRHNPTIMVALRAALGVSVEPVETVGWNGDALEAQCFGFLAARV
                     ARGLPLSFPGTTGAPRPMRGGRIVNP"
     gene            complement(3299..3586)
                     /locus_tag="VHX39_08775"
     CDS             complement(3299..3586)
                     /locus_tag="VHX39_08775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991252.1"
                     /translation="MFRAVLFTIGVALLIAASAAAFAGWPVIPAAVLGAIMTLGLLFE
                     RYVYKPIRQERPGPEWEQTTERFIDPSSGRSVTVYFDPRTGERRYVDEANG"
     gene            complement(3592..3918)
                     /locus_tag="VHX39_08780"
     CDS             complement(3592..3918)
                     /locus_tag="VHX39_08780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002381365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjQ family protein"
                     /protein_id="HEX3991253.1"
                     /translation="MIVVTTENLHGYRVREVKGQCFGVVVRSRGLGGNIMAGLRSIVG
                     GEITEYTALLEEARRHAIDRLVQNATQMGANAVVMMRFDSAEIGQTMSEIVAYGTAVV
                     VEPDNS"
     gene            complement(3969..4334)
                     /locus_tag="VHX39_08785"
     CDS             complement(3969..4334)
                     /locus_tag="VHX39_08785"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX3991254.1"
                     /translation="MSTVSTDLDLLRGLNHDYIAAVQTGDVRRFDEILAAEFYCSNPD
                     GTLINREGFLAQTARPVTIRNLSAHDVVIRLFGDVAIIHARTTYTLPRGDQGAGRYTD
                     VWARQNDAWRCVSAHVTRL"
BASE COUNT          796 a         1314 c         1416 g          911 t
ORIGIN      
        1 cgtgctgttc atgaccgact ggttgcacgg cgtgtcgcct gcatgggttg ctcttggcgc
       61 cgggattgtt tgcctgctgc cggggattgg ggtgttgccg gcaaacagcc tgtccgaaat
      121 gaatctcggg atgctggttt atatggcggg catattcggc gtcggtgcgg tgatcgcaac
      181 aagtggtttg ggctctgcgc tcagcggcgc gctgttgcag gtggcgggga tggcgccggg
      241 gcatgacgcg ctcaatctga cgctgatcgc cgggattggg gcggtgatcg ggtttgttac
      301 gacgttggtt ggaatgccgg tggtgctggc gccgctggcg ggagattttg cccatgcgag
      361 cgggttgccg gtgctgacgg ttctgatgct gcagatcgtc attttctcga cggtgtttct
      421 gccgtaccag aattttctga tggtgatcgg gatgcagtac ggtggggtca gtttgaaggc
      481 cgggacacga ttttgtctga cgcaggcagc ggtgacggtg cttgtgctgt gtccgttgga
      541 ttatttgtgg tggtggtggc tggggtactt gccgtgaggt cagcccgtcg agcgagcatc
      601 aacggtcacg ttactaaatg acatgccgag agcccgccag gcaaacctgg ttatcaccgc
      661 cgcgtgttca cgccgcccgc accagccggt gctgcttgcg tccggcggac agcttgatcg
      721 cgccgtcctt cgcgtcacgc aacgaaatga gggcgccttc ttcgataacc ggggtatcgt
      781 tcacccgtgc gccgccacct cggatcagac gccgcgcctc accattgctc gccgcaaggc
      841 cggccagcgt gaacaaccga aacgccgcga tccccgtctc caactcatcc cgaggcaacg
      901 ccacactggg caacgtgtct gccgcctcgc cctcctcgaa cgctaacctg gcggtttccg
      961 ccgcggcttc ggcactggcc tggccgtgtg cgaggacggt ggcagcagtg gccaacagtt
     1021 tcttcgcttc gttgatctcg gcgccttgca gcgcctccag ccgggcgatt tccggcaacg
     1081 gaatatcagt gaacagccgc aggaaacggc cgacatccgc atcctcggta ttgcgccaga
     1141 actgccaata atcgtacgcg gatacccgat cgccggtcag ccacaccgcg ccggccgccg
     1201 tcttgcccat cttggcgccc gatgcggtcg caatcagtgg cgtggtcaac ccgaatacgt
     1261 gtttgccgtc gctgcgccgc gtcaggtcca tgcccgaaac gatgttgccc cactgatcgg
     1321 agccgccaat ctgcaacatc acgccatgcc ggcgatgcaa ctcccgaaag tcataacttt
     1381 gcaggatcat gtagttgaat tccaggaaag tcatgggctg ctcgcggtcc agccgcagct
     1441 ttaccgagtc gaacgtcatc atgcggttga tggtgaaatg tgtgccgaca tcgcgcagca
     1501 ggccaatgta ggacaacgcg tccagccagt cggcgttgtt gaccatcatg gcatccgagg
     1561 tgccttcgcc gaaccgcagg aacggcgcga agacccgccg gatgccggcc atgttcgcgg
     1621 caatcgctgc gtcggtcagc atttgccgag actcgtcctt gcccgatggg tcgccgatgc
     1681 gggtcgtccc accgcccatc agcaccaccg gtttgtggcc gtatttctgc aacagtcgga
     1741 gaatcatgat ctgcacgagg ctgcccacat gcaaactgtc cgctgtgcag tcgaagccga
     1801 tataagcgct gatcgggcca gatttcatcg cttccgccag cgcatcctgg tcggtgcact
     1861 gaaagatgaa gccgcgcgca gcggcctcgg acagaaagtc gccagataaa gcggcggact
     1921 cggccgtggt catgatacgg aacccgtgct ggagtgaaac gcccgctgat taccagggga
     1981 cggccaggag agaaacatgc cccgtactat cggcctgatg agcggaacgt cgctggacgg
     2041 agtggacgcc gcctggctgg aaaccgacgg agagacggtg acggcgttcg gccccaccct
     2101 gacaatccca tatgatgatg cgttgcgtcg tgacctgcgg acggtgctcg atcttgcgcc
     2161 cggcctggct ccgggcgatc tgcgggtgac cagcgcggag gctcggctga ccgagtacca
     2221 tattcaggcc gtcagggcat tggaacggcc cgccgacctg atcggctttc atggccagac
     2281 catcctgcat caaccggatc ggcggcggac ctggcagatc ggcgatgcgg ggaggctggc
     2341 acgcgaaacc ggggtgccgg ttgcttacga cttccgctcg gccgatgtcg cggcgggcgg
     2401 ccagggggcg cctttcgctc cagccctcca tgcggccttg gcgcgtgatc tcgaccggcc
     2461 attggcggtg ctgaatatcg gtggtgtcgc caacgtgacg tggattggcg agggcgggat
     2521 cgatccgtcc caggcgctga tcgcgttcga caccggaccc ggcaatgggc cgctcgatga
     2581 ttggatgatg cggcataccg gccagggatt cgatcgtgac ggggcgctgt cccgcagcgg
     2641 aactgtcagt gctgcggtgt tgagccgcct gatggcagat gcgtattttg cccgcccagt
     2701 acccaaatcg cttgatcgac tggacttctc ccgtactctg gtggcgagcg gactggacgc
     2761 gttggcggtc gcggacggag cggcgacatt ggttgcgttc accgcggcct cgatcgctgc
     2821 ggcggcgttt ccggcgcggc ctcgccgttg gctggttacc ggaggcgggc ggcacaatcc
     2881 gacgatcatg gtcgcattgc gcgcggcact cggcgtttcg gtcgaaccgg tggaaacggt
     2941 aggctggaat ggcgatgcgc tggaggcaca gtgtttcggg tttttggcag cgcgggttgc
     3001 gcgcggttta ccgttgagtt tcccgggcac aacgggtgcg cccaggccga tgaggggtgg
     3061 acgaattgtg aacccgtagg ggattttaag catcgctgat ggccaatcga gaatctaccg
     3121 aactgtgtgc gctgctgttt tttccggtca catcgcccgc attcgtcgta tgcaaaatgc
     3181 tcgattttcg tttacggtga tcgtgagggc gggtcacgga cgcaacggta acgaatctaa
     3241 atcgtttttt gtcgacctgc gaagcagcgc cgttcgcttg tgacatatgt cagaagtttc
     3301 agccgtttgc ctcgtcgaca taacgccgct caccggtgcg cggatcgaag tacaccgtga
     3361 cgcttcgccc cgacgacgga tcgatgaatc gctcggttgt ttgttcccat tctgggcctg
     3421 gccgttcctg ccggattggc ttgtaaacgt accgctcgaa caacagaccc aacgtcatga
     3481 tggcgccgag tactgccgcc ggaataaccg gccaaccggc gaaggcagcc gccgatgcgg
     3541 caatcagtag cgcaacaccg atcgtgaaca gcactgcgcg gaacatacgc gtcagctgtt
     3601 gtcgggttct acgacgaccg cggtgccata tgcgacgatc tcactcatgg tctggccgat
     3661 ctcggcactg tcgaaccgca tcatgaccac ggcattggcg cccatttgtg tcgcgttctg
     3721 cacgaggcgg tcgatcgcgt gacggcgcgc ttcctcaagc aaagccgtgt attcggtgat
     3781 ttcgccgcca acgatcgatc gcaaacctgc catgatgttg ccgccgaggc cgcggctgcg
     3841 cacaaccact ccgaagcact ggcctttcac ctcgcgcacg cggtagccgt gcaaattctc
     3901 agtggtaacg acgatcacgt ccaactcctt ttggcacgtc cggaaggagg atgagatgcc
     3961 cggttgagtt acaggcgcgt aacgtgtgcc gacacgcaac gccatgcatc gttttgccgc
     4021 gcccaaacgt cagtgtaacg accggcaccc tggtcgccgc gaggcagcgt gtaggttgtg
     4081 cgggcatgaa tgatggcgac gtcgccgaac aggcggatca ccacgtcatg tgcactcaaa
     4141 ttcctgatcg tcaccgggcg cgcggtttgc gccagaaagc cttcgcgatt gatcagggtg
     4201 ccgtccgggt tggaacaata aaactcggca gccagtattt catcgaagcg ccgaacgtcg
     4261 ccggtctgca ctgcggcaat gtagtcgtga ttgagaccgc gcagaaggtc gagatctgtt
     4321 gaaacggtgg acattgttac actccagtcg atgagtcatt actgatgcac agatatgaca
     4381 gagattctgc cccgttattt tcgctcgcct tccaggaacc ccaatagcaa ccggttg
//
LOCUS       DATAVD010000474         2548 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2090901, whole genome shotgun sequence.
ACCESSION   DATAVD010000474 DATAVD010000000
VERSION     DATAVD010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2090901"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(32..229)
                     /locus_tag="VHX39_08790"
     CDS             complement(32..229)
                     /locus_tag="VHX39_08790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991255.1"
                     /translation="MPDFIFETACETIAATVGVRKFRSFDGDTRWALLWKEMRRLNAK
                     FADSTPPELPDEWHRSNPLFE"
     gene            444..932
                     /locus_tag="VHX39_08795"
                     /pseudo
     CDS             444..932
                     /locus_tag="VHX39_08795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012650068.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
     gene            complement(987..2116)
                     /locus_tag="VHX39_08800"
     CDS             complement(join(987..1675,1675..2116))
                     /locus_tag="VHX39_08800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611506.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEX3991256.1"
                     /translation="MKLYVVRLSTEERERLTTLISVGKHPARQLTKARILLKADVSAA
                     GEGWSDSKIADALDTSIDTVARTRQQLVEDGFEAVLVRKHSPASARTRIFDGAAEAKL
                     IALACSEPPKGRTKWTLALLEAAVVELKIVERASDNTIGRTLKKTNLKPHLQKQWVIP
                     PDASAAFVANMEDVLEVYHRPHDPAYPVVCVDEASKQLIAETRVTIKAKPGQPARHDY
                     EYERNGTANLFMMFAPLEGWRHVKVTDRHTAVDYAHLLKELADVHFAKANKIVLMEDN
                     LNTHKPASLYEAFPAAEARRLVERFEWHYTPKHGSWLNMAESELSVLSGQCLDRRIPD
                     KQTLIEEVTAWEASRNRKHAKADWQFTTADARVKLKRLYPAL"
     gene            complement(2219..>2548)
                     /locus_tag="VHX39_08805"
     CDS             complement(2219..>2548)
                     /locus_tag="VHX39_08805"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEX3991257.1"
                     /translation="RLPVIVRPLAATLGHRGVTHSILAVLACLFVLRWHGVRRAFVDP
                     LVVGYLSHLAADLLTSSGLRLAWPLPRRFAIPLCKTGSAAEHAIVAVVAIWLGATVLR
                     LYPALGL"
BASE COUNT          481 a          739 c          799 g          529 t
ORIGIN      
        1 gggcttctgg cgaggtatgt tcgaccgatc cttattcgaa aagcgggttg gatctgtgcc
       61 actcatccgg taattccggc ggagtagaat cagcgaattt tgcgttcaga cggcgcattt
      121 ccttccataa caaagcccag cgcgtgtcgc cgtcgaagct gcggaacttc cgaacgccaa
      181 ccgttgccgc aatcgtctca caggcggttt cgaagatgaa gtctggcata ggttcgtgac
      241 ttgtgatgat atgacggtgt attagttctt actaggttat gagttactgg atgttatttc
      301 gtcgtcattt aatcgttaat tcgacgctaa gtctggtcgg atagcttgaa gggaaaattc
      361 catggcgagg gcgttggtgc actgtggtgg tttgcagcgg atggtaagat gccctcccat
      421 ctctctggcc cctgcccgcc ccgatgccac acaagcacaa cgccgatcgc cggcaccaca
      481 ttccgaagat gtcgttcaag gtgcagacct ggccggcgta tgaggcaggg ctgcgccggc
      541 gtggcagcct gacattatgg attgaggacg gcgccctgga acattggcag acctgtggag
      601 agggtgggca ggctcgctac acggaggcgg ccatccagac gagcctgatg ttgcgcacgg
      661 cgttcaaact accgctgcga cagaccgagg gcctgatggc atcggtcatc gcgttgatgg
      721 atctgacgat ctcagcacct gaccacacca ctgtcagccg tcgggctgtg acgttgccgg
      781 tgatccggcc ggcgtcggtg ccgtctggtc cgctgcacgt gctgatcgac agcaccggtc
      841 tgcaggtcta cggggcgggc caatggctgg aagccaaaca tggtgcgaaa tcgcgccgga
      901 aatggcataa gctgcatctg gcggtggatg ccgtgccgcg cgacagcaaa gttggccggt
      961 cagcgacacg tagtaccccg agtcgttcat agtgcggggt agagtcgctt cagcttgacc
     1021 cgagcgtcgg cggtggtgaa ctgccaatcg gctttggcgt gtttcctgtt gcggctggcc
     1081 tcccaggcgg tgacttcctc gatcaaggtt tgcttatcgg ggatgcgccg atcgaggcat
     1141 tggcccgaca gcacgctgag ttcggattca gccatattga gccaactgcc atgcttgggc
     1201 gtgtagtgcc actcgaaccg ttcaaccagc cggcgggctt cggcggcggg aaaggcttcg
     1261 tagagtgacg ccggtttgtg ggtgttgaga ttgtcctcca tgagcacgat cttgttggct
     1321 ttggcaaagt gcacatcagc cagttccttg agcaggtgcg cgtaatcgac ggcagtgtgg
     1381 cggtcggtga ccttgacatg tcgccagcct tccagtggtg cgaacatcat gaacaggttg
     1441 gccgtgccgt tgcgctcata ctcatagtca tgccgggcgg gctgtccggg cttggccttg
     1501 atcgtgacac gggtttcggc gatcagctgc ttggatgcct cgtccacgca gaccacggga
     1561 tacgccggat cgtgcggccg gtgataaacc tccagcacat cttccatgtt ggctacaaac
     1621 gccgcgctgg catccggtgg aatgacccat tgtttttgca gatgcggttt gaggtcgttt
     1681 tttttagcgt ccgcccgatc gtgttgtcgc tggcacgctc gacgatcttc agctcgacga
     1741 cggctgcttc cagcagcgcc agggtccact tcgtacgccc cttcggcggc tcggagcagg
     1801 ccagggcgat cagtttggct tccgcggcac cgtcgaagat gcgcgtcctg gccgaggctg
     1861 gtgaatgctt gcgcaccaag accgcctcga acccgtcttc caccagttgc tgacgggtcc
     1921 gggccaccgt gtcgatgctg gtatcgaggg catcggcgat cttgctatca ctccagcctt
     1981 cgccggcggc cgagacatcc gctttcaaca ggatgcgcgc cttggtcagt tgccgggcag
     2041 gatgcttgcc cacactgatc agggtcgtca gccgctcccg ctcctcggtg ctgagcctca
     2101 cgacatacag cttcacggct ttctgtttcg cggtcacgaa gcatctccgt cattgcggag
     2161 acatcgattc agagatccac cgcggaatca atgacgaggg gtactaggca ccaccatcct
     2221 acagcccgag cgccggatac aggcgaagaa ccgtggcgcc aagccagatc gccacgaccg
     2281 caacaatcgc gtgctctgcc gcagacccgg tcttgcacag cgggattgca aagcgtcgcg
     2341 gcaacggcca cgccaggcgt aaaccgctgc tggtcaacag gtcggctgca agatgtgaga
     2401 ggtagccgac caccaatggg tccacaaaag cgcgacgcac gccatgccag cgcaggacga
     2461 acaggcaggc gagtacagcc agaatggaat gggtgacgcc gcgatggccg agcgtagccg
     2521 cgagcggccg cacaatcacc ggcagccg
//
LOCUS       DATAVD010000475         3774 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1533398, whole genome shotgun sequence.
ACCESSION   DATAVD010000475 DATAVD010000000
VERSION     DATAVD010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3774
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1533398"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2056
                     /locus_tag="VHX39_08810"
     CDS             <1..2056
                     /locus_tag="VHX39_08810"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     ATP-binding protein/permease"
                     /protein_id="HEX3991258.1"
                     /translation="GHRWYRTLSISVTGMMPKQSDAAAILSQGDAPTAQNATLAGGAR
                     TGAGGTRPRRWLILLAVAIAVVVLVPALLPAFYVTLFGYVGLATLVALGLVLLTGISG
                     QTSFGQATFVGLSAYATTILTRFEGAPPLLGLLAGLALTGTVAWLLGLITARLSGHFL
                     ALVSVAWGMSFFALFGTLPLLHGFNGIGDIPPLSVGPFSAENPRINLAVILAVTAAVM
                     ASLANLLDSRIGRAIRTLNGARLMGESVGIDTVRLSRAVFVIAALYAALAGFLFAHFQ
                     RFISPTPFSLGASIDYLFMVIIGGADTLWGAPLGAMLVVVLRDQFNDWIPRLTGRAGD
                     FEALVFSLVVIVLLQRAPSGLLPLLARLGQRVPTASAGGNAESAAAGDDGTAALPDAG
                     LSTQEWAEAAVAGSADAMMMRPSGSGSANLPENQPPAKAPGPELLSLENISRNFAGLA
                     AAQDVNFAVHAQEIVALIGPNGAGKTTLFNLVSGVLPPSSGRILLFGAPTGRLPPRRI
                     AALGVARTFQHVKLLPARSVLENVALGTHLSGRAGLWRAMLRLDRGEEAGLLAEARQQ
                     ASRLGLHQVLNIPAGDLPLGQQRVVEIARALCLRPRLLLLDEPAAGLRLPEKQRLAAL
                     LRQLRSEGIGVLLVEHDMDFVMQLADRIVVMDFGQKIAEGSPDEIQADPTVLEAYLGS
                     VT"
     gene            2053..2796
                     /locus_tag="VHX39_08815"
     CDS             2053..2796
                     /locus_tag="VHX39_08815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3991259.1"
                     /translation="MTEPLLRLDGLRAGYGHVEVLHAVSLTVSEGQIVAILGPNGAGK
                     TTLMGAVMGLLPRRGGSVHYRGVPAGTTEALVAAGAVLVPEQRALFTDMSVEDNLLLG
                     FYARRRAGERDARPAMHDVFAIFPRLEERRRQFAATLSGGERQMLALGRALMGRPRLL
                     LLDEPSLGLAPMLVREIFRVLVELRQGGLSILLVEQNVRAALQVSDYGYVLEMGEIAA
                     EGPGTALAQDRRILETYLGQRRGGPSPVA"
     gene            complement(3064..3363)
                     /locus_tag="VHX39_08820"
     CDS             complement(3064..3363)
                     /locus_tag="VHX39_08820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991260.1"
                     /translation="MAELIDFESEPETSTTLRDQRRPGRPEVADPNLIPLMRGEAPLV
                     DDANALSGPVEAGDLAAEPDRKTTLNAARGICLGVGLGSLIWCGIGAAFWYYFHG"
BASE COUNT          592 a         1218 c         1260 g          704 t
ORIGIN      
        1 ggggcatcgc tggtatcgca ctttgtcgat ttcggttacc ggcatgatgc cgaagcagtc
       61 ggacgctgcg gcaattttat cgcagggcga tgcgccgacc gctcaaaatg caacgctcgc
      121 tggcggtgcg aggacaggcg ccggtggcac gaggccacgc cgctggctca tcctgctggc
      181 ggtcgcgatc gcagttgtcg tcctcgtccc cgcgttgttg ccggcgttct atgtcactct
      241 gttcggctat gtcgggctgg ccacgctggt ggcactcggc ctcgtgctac tgaccgggat
      301 cagcggccag acctcgttcg gccaggccac gttcgtcggc ctctcggcgt atgccaccac
      361 gatcctgacc cggttcgagg gcgcgccgcc gcttctgggg ttgctcgccg gcctcgcgct
      421 taccggcacg gtcgcctggt tgctcggact gattacggcg cggttgtccg gccactttct
      481 cgcactggtt tcggtcgcct gggggatgag tttctttgcg ctgttcggca ccctgcccct
      541 gctgcacggg ttcaacggca tcggcgacat tccgccgctg tcagttggcc cgttctcggc
      601 cgagaacccg cgcatcaacc tcgccgtcat tctggcggtg accgccgccg tcatggcgtc
      661 actggcgaac ttgctcgaca gccgcatcgg gcgagcgatc cgcacgctga acggtgcccg
      721 actgatgggc gagagcgtcg ggatcgacac cgttcgcctg agccgggcag tattcgtgat
      781 cgccgcattg tatgccgccc tcgccgggtt tctgttcgcg catttccagc gcttcatcag
      841 cccgaccccg ttcagcctgg gtgccagcat cgactacctg ttcatggtca tcatcggtgg
      901 cgccgacaca ctctggggcg cgccattggg cgccatgctg gtggtggtgc tgcgcgatca
      961 gttcaacgac tggatccctc ggcttaccgg ccgggccggc gatttcgagg ccctggtgtt
     1021 cagcctcgtg gtgatcgtgc tgttgcaacg ggcgccatcc ggcctgctgc cgttgctggc
     1081 acgccttggc cagcgcgtcc cgacggcaag cgcaggcggc aatgccgaga gtgctgccgc
     1141 cggcgacgac ggcactgcag cattgcccga tgccgggctg agcacacaag aatgggctga
     1201 ggctgcggtg gccggctccg cagacgccat gatgatgagg ccgtcgggat ccgggtcggc
     1261 caatcttccc gagaaccaac caccagccaa agcgccggga ccggaattgc tgtcactgga
     1321 aaacatatcg cgcaacttcg ccgggctggc ggcggcacaa gacgtcaatt tcgcggtgca
     1381 tgcccaagag atcgtcgcgc tgatcgggcc gaatggtgcc gggaaaacga cgttgttcaa
     1441 tctggtcagt ggtgtgttgc caccgagttc gggccgcata ttgctgttcg gtgccccgac
     1501 cgggcgtctg ccgccgcggc gcatcgccgc tctgggcgta gctcgcacgt tccagcatgt
     1561 gaagctgctg ccagcgcgca gcgtgctgga gaacgtggcc cttggcacgc acctctcggg
     1621 gcgggccggg ctgtggcgcg ccatgctacg gctcgaccgc ggggaggaag ccggcctgct
     1681 cgccgaggca cggcagcagg cgtcccgtct cgggcttcac caggtgctca acatccctgc
     1741 gggcgacctg ccgctgggtc agcaacgcgt ggtggagatc gcccgcgcct tgtgcctgcg
     1801 cccgcgtctg ttgctgctcg acgaacccgc ggcggggtta cggctgccgg aaaagcagcg
     1861 tcttgccgca ctgctgcgcc agctgcgatc cgagggcatc ggcgtgctgc tggtggaaca
     1921 cgacatggac ttcgtcatgc aactggccga ccgcatcgtg gtgatggatt tcggccagaa
     1981 gatcgccgaa ggctcgcctg acgaaattca ggccgatccc actgtcctgg aagcctatct
     2041 gggctccgtc acatgaccga gccactgttg cgactggacg ggctgcgggc cggctatggc
     2101 cacgtggagg tgctgcatgc ggtcagtctt accgtgtcag agggtcagat cgtcgccatc
     2161 ctcgggccga atggcgcggg caagacgacc ctgatgggcg cggtgatggg cctgcttccg
     2221 cgccgcggcg gcagcgttca ctatcggggt gtgccggccg gcacgactga ggctctggtg
     2281 gccgccggcg ccgtcctggt gcccgaacag cgcgcgctgt ttaccgacat gagcgttgaa
     2341 gacaatctgc tgcttggctt ttacgcccgc cggcgtgcgg gcgagcgcga cgcccggccg
     2401 gccatgcacg acgtgttcgc gatctttccg cggctggaag agcggcggcg tcagtttgcc
     2461 gccactttgt cgggcgggga gcggcaaatg ctggcactgg gacgggcgct gatggggcgg
     2521 ccgaggttgc tgctgctgga tgagccaagc ctcgggctgg cgccgatgct ggtccgcgag
     2581 atcttccggg tgctggtcga actacggcaa ggcggattgt cgatcctact ggtggagcag
     2641 aacgtccgcg cggcgctgca ggtctccgat tacggctacg tgctggagat gggcgagatt
     2701 gccgccgagg ggccaggcac cgcgctggcg caggaccggc gaattctgga aacctatctc
     2761 ggtcaacggc ggggcggacc gtcccctgtg gcgtgatcgt tccggctgga gcaacgggcg
     2821 gcgcagccgg gccggagacc tggcgcaagg tgttttgttg cgacctgcga acacggaggc
     2881 tccggtaccc atctccaacc gtcactgccg ggcctgacct gggcgcggca agtcctgatg
     2941 gagatcgccg gctcggtccc ccgcgcatga tttggcacga gtgctgcgat cggttgcaaa
     3001 agagggtggc ggaacaacaa tggaggtcgg tccgttcaga ccgctgacat tacctggttg
     3061 aattcaaccg tggaagtaat accaaaaagc agcgccgatg ccgcaccaga tcaggctgcc
     3121 cagacccacg cccagacaga taccgcgcgc cgcattcagc gtggttttac gatccggttc
     3181 ggcagcgagg tcgcccgcct cgaccggtcc ggacagggcg ttcgcatcgt cgaccagcgg
     3241 cgcctcgccg cgcatcaatg ggatcaggtt cggatcggca acctccgggc gccccgggcg
     3301 ccgctgatcg cgcagcgtcg tcgaggtctc cggttctgac tcaaaatcaa tcaattcggc
     3361 catgatacac cccctgaggc ggagcatgtc tcggtagcgg ttgctaaaag gttgcagtta
     3421 tctcgtatcg acgcgaacgc tcctgtagga cgctttgaca gccgatcccg acaaacggtg
     3481 ccgatacgct gcaaagcgca gtcaatccag atctacggca ggatcaaccc aacgagctgc
     3541 gccggcccaa caagtatccg cacattaaat gcgcggtgtt ttttcattct acgcgaccca
     3601 ttacaccgac cgcagcgtaa ttggcaagtc agcgaggttg tcctggacca actcgcctaa
     3661 gtcccggccg gaccgatcct acagacaggc cgactccgcg tggtcttccg cggcgtccgg
     3721 ccggtcatgg tcgcatccgc cccctcggcg agcgggacca tcgcgccatt gccc
//
LOCUS       DATAVD010000476         4617 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2465094, whole genome shotgun sequence.
ACCESSION   DATAVD010000476 DATAVD010000000
VERSION     DATAVD010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4617
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2465094"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1131)
                     /locus_tag="VHX39_08825"
     CDS             complement(<1..1131)
                     /locus_tag="VHX39_08825"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEX3991261.1"
                     /translation="MSDPGERSPATHPPPQAPLRRPGFSVVWLIPILAAVIAIYLGYR
                     TLTERGPLLTLTFATADGLTPGQTQVQYKAVDLGTVENIALGPEHRDVIVKIRMNDVG
                     RPFLTGHARFWVVRPSFSAGGISGLQTLVSGDYIAVDPGPVGGGFQDHFVGLEEPPGV
                     RSDEPGHTYILKAEDIGSLGSGSPVFYRDVAVGEVLGYNIGNGFGPVTVNIFVRSPYD
                     HLVRARSHFWNSSGIAATIQNGAFHIEFQSLQAIISGGVTFDVPPEARSSAPAADNSV
                     FPLYASRNAAESAGYKRKIPLVTYFDSSVGGLARGAPVDVLGIQVGQVTDVKLLVDLQ
                     TAKVRVRVAMELQPERVFAASILPPNMTLKQGIQALVNGGLHV"
     gene            complement(1128..2057)
                     /locus_tag="VHX39_08830"
     CDS             complement(1128..2057)
                     /locus_tag="VHX39_08830"
                     /inference="COORDINATES: protein motif:HMM:NF016301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HEX3991262.1"
                     /translation="MSPRLLKGLFRWYGAITPWAMVDVYLLGFLVAYTRLIAIATVHL
                     DTAIYALIGLMISMAAADAAMDTEMVWRALDAAEMKADERHARPHRYVPSPSGSASGL
                     IGCRCCDLVNCAGPGQRCRRCDTVLHMRKANSLGRSWALLVAGGILFLPANIYPVMVM
                     TELAVQQPYTIMGGIRDLLAAGLWPLAALVFFASITIPLLKLVTLGYMLVQTQAGSTK
                     HLIGRTRAFRVIEFVGRWSMIDVFVLSILVALVRFGQFANFVAQVGAPCFAAVVVLTM
                     FAVEAFDPRLMWDACGSSRPDHQASATAAEVRA"
     gene            complement(2402..3058)
                     /locus_tag="VHX39_08835"
     CDS             complement(2402..3058)
                     /locus_tag="VHX39_08835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991263.1"
                     /translation="MTLQMKRLNSLTKTSAVRSIAGAACLVSLIAWQPAHAQTGMAPS
                     TTMRNVIPQAEEVTLQAKITAIDPSTRAVTLKGPAGNSLTVTAGPLVRLDLLRVGQTV
                     NAQYYRSVAFIVNPPRGGNGVPISGAQFIQATMRPVQAPGGVALRMVKISGTVVGVDL
                     SSNSISVVNPSGGQVYTIDVTDPSRIAMLPSLHVGDTISAVVTEVLAVSITPAPKGWF
                     "
     gene            complement(3178..4173)
                     /locus_tag="VHX39_08840"
     CDS             complement(3178..4173)
                     /locus_tag="VHX39_08840"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HEX3991264.1"
                     /translation="MNRPAQTEPQLDDRADMVLISGGTFRMGSDRHYPEEAPVHRVTV
                     ASFRMDRTPVTNRQFRAFVQATGYVTEAEIAPDPKDYPGALPHMLKPGSLVFTPPAHP
                     VDLRNWSQWWRFEFGANWRRPYGRGKANHGLDDHPVVHVAWRDVEAYATWAGKALPTE
                     AEWEYAARGGLDGAEFAWGDTFTPGGKHLANTWQGAFPHENLATDGYTRTSPVGTYPP
                     NFYGLCDMIGNVWEWTSDWYSARHEAEADGQKSCCIPENPRGGNEAGSYDPCEQPVRV
                     PRKVVKGGSHLCAPNYCHRYRPAARHAQPVDSGTSHIGFRCVIRAESELRTKTMS"
     gene            complement(4438..>4617)
                     /locus_tag="VHX39_08845"
     CDS             complement(4438..>4617)
                     /locus_tag="VHX39_08845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991265.1"
                     /translation="PGAAEAATLSSTESGARGAYYLMLRRLHLAHRVLSEAAATMCAL
                     CLHFFVSFMFICRIM"
BASE COUNT          946 a         1396 c         1407 g          868 t
ORIGIN      
        1 gacgtgtaga ccgccgttca ccaaggcctg tataccttgc ttcagcgtca tgttgggggg
       61 caggatcgag gctgcaaaca cgcgctccgg ctgcagctcc atggcaaccc gcaccctgac
      121 tttcgccgtc tgcagatcga ccagcagctt cacatcggtc acctggccga cctgaatgcc
      181 cagcacgtcg accggcgcgc cgcgagcaag gccacccacc gaagagtcga aataggtcac
      241 cagagggatt ttccttttat atccagccga ttccgccgcg ttgcgcgagg catagagcgg
      301 aaacacgctg ttgtcggcag cgggggcgct ggatcgcgcc tcgggcggaa catcgaatgt
      361 gacgccgccg gaaatgatcg cctgtagcga ctgaaactct atatggaagg cgccgttctg
      421 aatggtcgcc gcaatgcccg aagaattcca gaaatggctg cgcgcgcgca ccaggtggtc
      481 gtagggtgaa cgcacgaaga tattcacggt cactggacca aaaccattgc cgatgttgta
      541 gccgagcact tcacccacgg cgacatcgcg gtaaaatacc ggtgagccgg agccgagcga
      601 accgatatcc tcggctttta ggatataagt atggcctggc tcatccgagc ggacgccagg
      661 tggctcctcc agcccaacaa aatgatcctg gaatcccccc cctaccgggc cgggatcgac
      721 ggcgatatag tcgccggaaa ccaaagtctg caggccggaa attccgcccg cggaaaagga
      781 tggtcgtacc acccagaacc gtgcatggcc ggtcaggaat ggcctaccga catcattcat
      841 gcggatcttg acgatgacgt cgcggtgctc agggccgagc gcaatgttct ccacggtccc
      901 aaggtcgacg gctttgtatt gcacttgcgt ctggcctggc gtgagcccgt cggcagtggc
      961 gaatgtcagc gtgaggagcg gccctcgttc cgtcagggtc ctgtagccga gatagatggc
     1021 aataactgcc gccaggatcg ggatgagcca gacgacggaa aaccctggcc tccgcagggg
     1081 ggcctggggt ggcgggtggg ttgcagggct acgttctccc ggatcgctca tgcgcggacc
     1141 tccgcggccg tcgcactggc ctgatggtcc gggcgggaag atccgcacgc atcccacatc
     1201 aatcgcggat caaaagcctc gacggcgaac atcgtgagca caacaaccgc ggcgaagcag
     1261 ggggcaccga cttgcgcgac aaaattggcg aattgcccga agcgcacgag ggcaacgaga
     1321 atcgacagaa cgaagacgtc gatcatcgac cacctgccga cgaattcgat cacgcggaat
     1381 gcgcgcgttc gcccgatcag gtgtttcgta ctgcccgcct gcgtctggac cagcatgtat
     1441 ccgagggtca cgagtttgag aagcgggatg gtgatgctgg caaaaaacac cagcgcggca
     1501 agcggccaga gcccggcggc caacagatcg cggatgccgc ccatgatggt gtagggctgt
     1561 tgcacggcaa gctccgtcat caccatcacg ggatagatat tggcgggcag aaacagaatg
     1621 ccgccggcga ccaggagcgc ccaactgcgg ccgaggctgt tcgcctttcg catgtgcagg
     1681 accgtgtcac agcgtcggca acgttggccg gggcctgcgc aattcaccag atcgcagcaa
     1741 cgacagccga tcagcccgga tgcgctgcct gatggggacg gcacgtagcg gtgcggccgt
     1801 gcgtgccgtt cgtcggcttt catctcggcg gcgtccaagg cacgccacac catctcggtg
     1861 tccatggcgg catcggcggc cgccatggag atcatgagcc cgatcaaggc atagatcgcg
     1921 gtgtcgaggt ggaccgtcgc aatcgcgatc aggcgcgtat aggcgacgag aaagccgagc
     1981 agatagacat caaccatcgc ccagggcgtg atggcgccgt accaacggaa cagccccttc
     2041 agcaaccgtg gggacatccc ctttattttc aacccgagtt tttccggtga tgataaacac
     2101 catccacctc acgaccaggc cgcgggaaac gctcgcgaac acaatctccc tcaaggagag
     2161 ttgcacgtta tgagagtagg ctcccggcca atcgctgggc cagttcaacg atcagcctct
     2221 ctcaaccgtt tttgtcacca gcttttggac atcggcgagg caatggcctg gccgtttcgt
     2281 attgccgtgt taccttctat tttttagcgt cgccgtgccg cgggtgccgt aggttgtagc
     2341 aaacaccagg ttgcagcaaa cactgaggcc ggcatttgcg ccggcctcaa ctcatgcggc
     2401 tttagaacca gcccttcggc gctggggtga tggagacagc cagcacctca gtgacgacgg
     2461 cactgattgt gtctcccaca tgcaaagagg gaagcatggc gatccgggaa ggatccgtaa
     2521 catcgatcgt atagacttgg ccgccggacg gattgacaac gctgatgctg ttcgacgaca
     2581 ggtcaacccc cacaacggtt ccgctgatct tgaccatccg aagtgccaca ccgcccggtg
     2641 cctgcacggg ccgcatagtg gcttgtataa attgggcgcc ggagattgga acgccattgc
     2701 cgccccgcgg cgggttaaca atgaaggcaa cggagcgata gtattgggca tttacggtct
     2761 gaccgacccg aagaagatca agacggacaa gtggtccggc agtgacagtc agcgaattcc
     2821 ccgctggtcc cttcaacgtc accgccctcg tgcttgggtc gatggcggtg atcttcgcct
     2881 gcaacgttac ttcctcggct tgcgggataa catttctcat ggttgtgctc ggtgccatgc
     2941 cggtttgcgc atgggcaggt tgccaagcga tcaatgacac caggcaagcg gcaccggcaa
     3001 tcgaccgcac ggcagaggtt ttagtgagtg agttaagacg tttcatttgt agggtcattt
     3061 gtaggactcc ctctgttaaa attagcaaac gagcgccgtt ggtatgcgcg attaccaggg
     3121 cgatcggctt ctcgagccgg acaaattgtg cgctgcccga gttcgtcgtg gttcagctca
     3181 tgacatcgtc ttcgtgcgaa gttcgctctc agctcgaatg acgcatcgga agccgatatg
     3241 gctcgtgccg gaatcgaccg gttgggcgtg gcgggcagcc gggcgatagc ggtggcagta
     3301 attgggcgcg caaagatgtg agccgccttt gacgactttt cgcggaactc gtaccggctg
     3361 ttcgcatggg tcgtagctgc ccgcttcatt cccaccgcgg ggattttccg gaatgcagca
     3421 ggatttttgg ccatccgctt ccgcttcgtg ccgggcggaa taccaatcag aggtccattc
     3481 ccacacgttg ccgatcatgt cgcacaggcc atagaaattt ggcggatacg tcccgactgg
     3541 cgacgtgcgg gtgtagccgt ccgtcgccag attttcgtgc ggaaatgcgc cttgccaggt
     3601 attcgccaga tgcttgccgc ctggtgtgaa cgtgtcaccc caggcgaatt cggcgccatc
     3661 aaggccgccg cgggccgcgt actcccattc ggcctcggtc ggcagtgcct tccccgccca
     3721 ggtcgcatag gcttcgacat cccgccatgc cacgtgcacc accggatggt cgtccaggcc
     3781 atggttcgct ttgccccgcc catacgggcg tcgccaattc gcgccgaact cgaagcgcca
     3841 ccattgcgac caattccgca aatccaccgg atgggctggc ggcgtaaaaa ccagagagcc
     3901 gggcttcagc atatgcggca gggcgcccgg atagtccttc ggatccggcg cgatctcggc
     3961 ttcggtgaca tagccggttg cttgcacgaa ggcgcggaac tggcggtttg tcaccggcgt
     4021 gcgatccatc cgaaatgagg caaccgtcac acgatgaacc ggcgcttctt ccgggtagtg
     4081 ccgatccgat cccatccgga atgtgccgcc cgagatcagc accatgtcgg cacgatcatc
     4141 gagctgcggc tctgtttgag cggggcggtt cattctggct ccttccgata cgaggtgccg
     4201 gcgcaaaatt tcgagatcgg ccttgcctcg gccccggttg agagagcggc aatcgctgag
     4261 cgcctacatc gcgcccctct cagagcatcc cggcgcggca gccgatgacg ccgaacgcgc
     4321 atgccgcgga cgaaatatcg aggacaaatg tctccgcacg cggtagttgc cgttcagtaa
     4381 cgttgtcagc gtgctttcgc ctcacgacgc atcctgccag caagcatggc ttgcgggcta
     4441 cataattcgg caaatgaaca taaacgacac gaaaaaatga agacacaatg cgcacatggt
     4501 ggctgcggct tcgctcagca cccgatgcgc cagatgcagc cggcgcagca tcaggtaata
     4561 tgcgccgcgg gcgccgcttt cggtggaact cagcgtggcg gcttcggcag cacccgg
//
LOCUS       DATAVD010000477         1805 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1346178, whole genome shotgun sequence.
ACCESSION   DATAVD010000477 DATAVD010000000
VERSION     DATAVD010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1346178"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            9..593
                     /locus_tag="VHX39_08850"
     CDS             9..593
                     /locus_tag="VHX39_08850"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEX3991266.1"
                     /translation="MRDRAMLHLAFAAALRVSELVTLRMDQLDQQTMAGIQVMGKGRR
                     ERVLPLWKETATTLRIWLAVRQKNGDPELFLNAAGHAMTRSGFEYILSKHAATAAHKQ
                     PSIATKRVTPHILRHTCAIHTLQATKDIRKVSLWLGHASLQSTEIYLRADPTAKLEAL
                     AVMAPPMITPGRFRAPDKLLAMLRQAGQTKNYVG"
     gene            662..1384
                     /locus_tag="VHX39_08855"
                     /pseudo
     CDS             662..1384
                     /locus_tag="VHX39_08855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612315.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          351 a          603 c          514 g          337 t
ORIGIN      
        1 tgtcgggcgt gcgagaccgg gccatgctac acttggcctt cgcagcggca ctgcgcgtct
       61 cggagttggt tactctccgc atggatcagc ttgaccagca aacgatggcc ggcatccagg
      121 tcatgggtaa aggacggcgc gagcgcgtgc ttccgctatg gaaagagaca gccacgaccc
      181 tcaggatctg gctcgcggtt cgtcagaaaa acggtgaccc ggaattgttc ctgaacgccg
      241 ctggccacgc catgacgcgg tccggattcg aatacattct gagcaagcac gccgccacgg
      301 ccgcgcacaa gcagccgtcc atcgcgacga agcgagtgac accgcatatt ctgcgccata
      361 cctgtgcgat ccacacgctc caggcgacga aggatatccg gaaggtctcc ctttggctcg
      421 gccatgccag ccttcaaagc acggaaatct acttgcgcgc cgatccgacc gcgaagttgg
      481 aggcgctcgc ggtcatggcc ccgcccatga tcacgccagg ccgctttcga gctcccgaca
      541 aactcctggc gatgctgaga caggcgggcc agaccaaaaa ttatgtcggg tgatttaaac
      601 cggtacggcg acaagatcag caaccatgtc gccgactccg catgattgtc gactccacat
      661 aaacccgcat gttcattttc ttgttcctgg cggcgggatc gcacctgatg gtgaaagctg
      721 ggtcgcatct cggccaggat tcttcctgcc ggtcacggtg ctatcgccac tgttccgtgg
      781 gttattcctg cgcgacctgg agaaggcatt tgctgccggc gccctgcact tcttcgactc
      841 acaccgtcac cttcaagaac cggcggcgtt ccggcgtttc ctggcaccgg tctacaaggc
      901 gaaatgggtg gtctatgcga agccgccctt cgccgggccg gcacaggttc tcgactatgt
      961 cgggcgctat acccaccgtg tcgccatttc caacaaccgc ctggtgtcca tggacaacgg
     1021 ccaggtttcg ttccggtgta aggattaccg cgacggcaac cgccagaaga cgatgaccct
     1081 ggacggcggg gagttcatcc gccgcttcct gatccatgtg ctgccggacg ggtttcaccg
     1141 catccgctat ttcggcttcc tcggaaattg ccaccgcgcg cggaagcttg ctcgctgtcg
     1201 ggagctgctc ggcatggccc cgcccgtacc aacggccgat ccgcccgctg attaccgcga
     1261 ccggttcgag gccttgaccg gcctgtcgtt gcgccaatgt ccgcactgcc acaccggcat
     1321 catggtggtg atcggctgca tcgcgcgacc aacactctgt cagccagggc cggacacatc
     1381 atgagcccgg cgcgacgttc cgaccacaca aagccgaccc gaccgcagag cggcgtggag
     1441 atgttgtggc cccgagcgtc attggtgctc ctcagcacgc gccaaacgcc cagatcaggg
     1501 aagttccgat cgctcgctgg ccaggttgct tcgccgaatt gctcccgccc gccacccggc
     1561 acgccacgat cgcgctccaa caaacaatcc aggtgcattc aacgcccata gcccgggcag
     1621 cgggggcggt ttagtccaac acgtttttcg ctcaccggcg cggcccctga ctgcggagcc
     1681 ctctcggcaa ggcctgtgcg ccgcgccgcc aagcgaaaaa cgctcttcat tatccattga
     1741 acgcaatgat aacgcgccat aagtcgaacg ttgcgtaacg aagcatcggc ttcgaaccaa
     1801 aacca
//
LOCUS       DATAVD010000478         1573 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1160678, whole genome shotgun sequence.
ACCESSION   DATAVD010000478 DATAVD010000000
VERSION     DATAVD010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1160678"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..227
                     /locus_tag="VHX39_08860"
     CDS             <1..227
                     /locus_tag="VHX39_08860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HEX3991267.1"
                     /translation="GGTVFHPTSTCKMGSDAMAVVDAELRVRGVEGLRVVDASVMPTV
                     VSGNTNAATIMIAEKAADLVRQRAPLAVAA"
     gene            complement(228..1400)
                     /locus_tag="VHX39_08865"
     CDS             complement(228..1400)
                     /locus_tag="VHX39_08865"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEX3991268.1"
                     /translation="MTAQGVYQNFAIDRVVYGKPAAETLVTEAARLGAKRVFLVVSRT
                     LDNETTWVNEMRTVLGARYAGSFDGVPSHTPRQSVLDATAQAREVGADLIVTFGGGSG
                     TDAGKMIRLALKHDIRAVEDFDRFVVRVAPDGSRALLDYAAPDVPQIAIPTTLSGGDF
                     NPSAGATDTRTMLKEIFRHPRLVPSVIVLDPAVTVRTPQWLWLSSGIRALDHAVETVC
                     APAADARSRLEAVSAITLLARALPRTHQDPNDLGARMDAQLAVWLSMEHNRFGISMGA
                     SHGIGHVLGGTCNVPHGYTSCVMLPPVLRYNESANGDRQAMVAEAFGRPNEPAWRVVH
                     EFVASLGLPRSLAEVGVTGEKFETVAKAAMLDHYLHTNPRPIHGVSDIMDVLRMAA"
BASE COUNT          318 a          506 c          466 g          283 t
ORIGIN      
        1 acggcggcac cgtgtttcat ccgaccagca cctgcaaaat gggcagcgat gcgatggccg
       61 tcgtcgatgc cgaacttcgg gtgcgcggag tggaggggtt acgggtcgtc gatgcctcgg
      121 tcatgccgac cgtggtttcg ggaaacacca atgcggcaac catcatgatt gcggaaaagg
      181 ctgcggatct ggttcggcag cgtgcgccgc tggcagtggc ggcctgatca cgccgccatt
      241 cgcaaaacat ccatgatgtc gctgacacca tggatcggcc gtgggttggt gtgcaaatag
      301 tgatccaaca tggcggcctt cgccactgtc tcgaactttt ccccggtcac gccgacctcg
      361 gccaggctgc gcggtaaccc caggctggca acgaattcgt ggacgacgcg ccatgcgggt
      421 tcgttgggcc tgccgaatgc ctcggcgacc atggcctgac gatccccgtt ggcgctttcg
      481 ttgtagcgta acaccggcgg caacatgacg catgatgtat agccatgcgg aacgttgcag
      541 gtgccaccca gaacgtgacc gatcccgtga ctggccccca tggaaatacc gaaacggttg
      601 tgttccatcg acagccacac cgccaactgc gcgtccattc tggcgcccag gtcgttcgga
      661 tcctgatggg tccgcggcaa agcacgggcc agtaacgtga tcgccgacac tgcctcgagc
      721 cgcgaacgcg catccgcagc cggtgcacaa accgtttcga ccgcgtgatc cagcgcccga
      781 atccccgacg acaaccacaa ccattgcggc gtccgaaccg tcaccgccgg atcgagcacg
      841 atgacactgg gaaccagccg agggtgccga aagatctcct tcagcatcgt ccgtgtatcg
      901 gtggctccgg cggacggatt aaaatcgccg cccgacaatg ttgtcggaat cgcgatctgc
      961 ggcacgtccg gggccgcata atcgagcaac gcgcgagaac cgtccggcgc aacccgcacc
     1021 acgaaccggt caaaatcctc cacggcacgg atgtcatgct ttaatgccag gcggatcatc
     1081 ttgcctgcgt cagtgcccga accgccgcca aacgtaacaa tcaaatctgc gccaacctcc
     1141 cgggcctggg ctgtcgcatc gagcaccgac tgtctgggcg tatgggacgg cacgccgtcg
     1201 aacgatcccg cgtaacgcgc accaagtacg gtgcgcatct cgtttaccca ggtggtttcg
     1261 ttgtccagag tacggcttac caccaggaag actcgcttcg cacccaatcg agccgcttcc
     1321 gtgacgagcg tttccgctgc gggcttgccg taaaccacgc ggtcgatggc aaaattctga
     1381 taaacgccct gagccgtcat gtcagaagcg gtctccgtca tcgggcgccg gtacctcgaa
     1441 cgcgttgacc acgccggaca gagcgccata gaagctcatg atcgcggtca gttccaccag
     1501 ccattgggtg ccgtggcgct tatgcaacgt gtcgaacacg gactgatcga cgcggttggt
     1561 cagagccaat tgg
//
LOCUS       DATAVD010000479         1647 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1907479, whole genome shotgun sequence.
ACCESSION   DATAVD010000479 DATAVD010000000
VERSION     DATAVD010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1907479"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            33..119
                     /locus_tag="VHX39_08870"
     tRNA            33..119
                     /locus_tag="VHX39_08870"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:67..69,aa:Leu,seq:taa)
     gene            145..492
                     /locus_tag="VHX39_08875"
     CDS             145..492
                     /locus_tag="VHX39_08875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991269.1"
                     /translation="MPDDNDLFDDDGQEARDEFERLTQLLSQHVLKFADDEDIPDEML
                     SVLLLRIAMTSRMVNYVATTAKPSAGGLKLDLDRFRRDVEDIIRETKKDAEAFVARAK
                     AEIAAAELDEDED"
     gene            664..1083
                     /locus_tag="VHX39_08880"
     CDS             664..1083
                     /locus_tag="VHX39_08880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991270.1"
                     /translation="MIQDGEYAAWYKTPRGEGTGIVYLANGEITGGDSVLSYSGWYKV
                     EEDRFTAVLTTRRHTAGQPSVFGIDEVELRLAGKSTGVTASCTGTATQAPDLPFQATL
                     IRVQTTQAPSIAPAQKSAGVLVDLQRHGVSHPAKARS"
     gene            1403..>1647
                     /locus_tag="VHX39_08885"
     CDS             1403..>1647
                     /locus_tag="VHX39_08885"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3991271.1"
                     /translation="MSPFENPQFEKITLPPGLTFDALTSGETGSPLVLLLHGFAESMN
                     CWHAQLAALAANGYRAVAPSQRGYSPGARPDVGVSAN"
BASE COUNT          344 a          512 c          476 g          315 t
ORIGIN      
        1 aaacgcgtta agtctctgat ctcgtgacca aagcggacgt ggcggaactg gtagacgcaa
       61 gggacttaaa atccctcgat ggcaacgtcg tgtgggttcg actcccaccg cccgcaccaa
      121 acccggcagc atgatgggat agccatgccc gatgacaatg accttttcga cgacgacggc
      181 caggaagccc gtgatgaatt cgaacggctc acgcagttgc tgtctcagca cgtcctcaag
      241 tttgccgacg acgaagacat ccccgacgag atgctcagcg tgctgctgct tcggattgca
      301 atgacctcgc gtatggtgaa ctacgtcgcc acgacagcca agccctcggc cggcggactc
      361 aaactcgatc tcgaccggtt tcgccgcgac gtcgaggaca tcattcgcga gacgaaaaaa
      421 gatgccgaag cgttcgtcgc acgcgccaag gcggagatcg ccgcggcgga actggatgag
      481 gacgaggatt gaatcgggcg gggctttgtg atgacgacgg atcgcgtccg gaaaaatcga
      541 atcgaacacc gcttccgccg ttcgccaatc attaacccca ccggcggatg taacaaccgc
      601 aagctgtatt tcaaactccg ttcgcactat gcctccgccg tttcggtgcg aagggtgggt
      661 gacatgatcc aggatggcga atatgcggcg tggtataaga ccccgcgggg cgaaggtacc
      721 ggcatcgtct accttgccaa cggcgaaata accggcggcg acagtgtgct gagttattcc
      781 ggctggtaca aggtcgagga agaccgcttt accgcggtgt tgaccaccag acggcacacc
      841 gcgggacaac cttcggtgtt cggtatcgac gaggtggaat tacggcttgc cggcaaatca
      901 acgggcgtga cggcgagctg caccgggacc gcgacgcagg cgccggacct gccttttcag
      961 gcaacattga tccgcgttca gaccacgcag gctccatcaa tcgcgcccgc gcagaagtcc
     1021 gctggcgtgc tggtcgatct gcagcgacat ggcgtgtcgc atccggccaa ggcgcgatca
     1081 taaattttcg agaacggcgc ccgtgccgcc aatggcttcg cgcctgagcg cgcgactgcg
     1141 gctgttcacg tcggcggctc gcacgatatt ttcgtgcctt tctgcttgct tcccaacgca
     1201 tcgttccaga ggcatcgttc ccaaggcatc accaacggta atttcttact ttcattctca
     1261 tcgatttgcc cgttcaaacg atcgcttcgc agaacccggt ggacgccggc gaattaaagt
     1321 cgctgaatga cagccctgcg caagttctgc tcctccgccc gcaacctgtg ccgcagcaac
     1381 gggtttgcat cggatcaatt ccatgtcgcc attcgaaaac ccgcaattcg aaaaaatcac
     1441 gcttccgccc ggcctgactt tcgacgccct cacctcgggc gaaacaggtt cgccgctggt
     1501 gctgctgctg cacggctttg cggaatcgat gaactgctgg cacgcgcaac tggcggcgct
     1561 cgccgccaac ggctatcgcg ccgttgcacc gagccagcgc ggctattcgc cgggcgcgcg
     1621 gcccgatgtc ggcgtatcag ccaatta
//
LOCUS       DATAVD010000480         2705 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1721147, whole genome shotgun sequence.
ACCESSION   DATAVD010000480 DATAVD010000000
VERSION     DATAVD010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2705
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1721147"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..777)
                     /gene="minD"
                     /locus_tag="VHX39_08890"
     CDS             complement(<1..777)
                     /gene="minD"
                     /locus_tag="VHX39_08890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003622855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HEX3991272.1"
                     /translation="MAKVLVVTSGKGGVGKTTTAAALGAALAQAGENVVVVDFDVGLR
                     NLDLVMGAERRVVYDLINVIQGDAKLAQALIRDKRIDTLSLLPASQTRDKDALTEAGV
                     ALIIEQLREKFDWIICDSPAGIEKGAMMAMRYADIAIVVTNPEVSSVRDSDRIIGMLD
                     SKTAKAERDERIEKHLLLTRYDAGRAARGEMLKTDDVLEILSIPLLGIVPESVDVLNA
                     SNLGSPVTLNNPTSAAAKAYFDAARRLRGEKFEIAIPIQRK"
     gene            complement(826..1578)
                     /gene="minC"
                     /locus_tag="VHX39_08895"
     CDS             complement(826..1578)
                     /gene="minC"
                     /locus_tag="VHX39_08895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006557039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004857 - enzyme inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HEX3991273.1"
                     /translation="MTETRPFIRLRGRSIMALVLTPEPPLAGWLASLDAQIERAPNFF
                     DGRPVIVDLGTLPRETGDVAGLMHAIVDRGIHIIGTEGAHSSWPGLEAWGRKLPGATQ
                     PAKPIEVPERVVQVEPAAPTARAAAPEPAPPPQIHSPVEPASLLIDHAVRSGQSITFE
                     QGDITILGSVASGAEVVAGGSIHVYGALRGRAIAGLSGRIGARIYCRKLHAELVAIDG
                     VYQTAEDMPTERIGTPSCAWLDGDLMRITPID"
     gene            complement(1943..>2705)
                     /locus_tag="VHX39_08900"
     CDS             complement(1943..>2705)
                     /locus_tag="VHX39_08900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FumA C-terminus/TtdB family hydratase beta
                     subunit"
                     /protein_id="HEX3991274.1"
                     /translation="AQFGGKYFCHDVRVIRLPRHGASLPVGIGVSCSADRQILAKITP
                     DGVFLEQLETDPAKYLPETTDAHLTDDSVAVNLDRPMAEICAQLSQYPVKTRLALTGT
                     MVVARDIAHAKLKERLDSGQGLPDYLQSHPVYYAGPAKTPEGYATGSFGPTTAGRMDS
                     YVAEFQAAGGSLVMLAKGNRSKSVQDACKAHGGFYLGSVGGPAARLAQDCIRKVQVLE
                     YPELGMEAVWRIEVENFPAFIVMDDKGNDFYEGLE"
BASE COUNT          501 a          845 c          805 g          554 t
ORIGIN      
        1 tttgcgttgg atcggtatgg cgatctcgaa tttctcgccg cgcaaccgcc gtgccgcgtc
       61 gaaatacgcc ttcgccgcgg cactcgtcgg attgttgagc gtcaccggcg agccgaggtt
      121 ggaggcgttc agcacgtcca cgctttccgg cacgatccca agcagcggga tcgacaagat
      181 ctccagcacg tcatcggttt tcaacatctc gccacgggca gcgcggccgg cgtcgtaacg
      241 ggtaagtaag agatgctttt caatgcgctc gtcgcgctct gcctttgcag tcttcgagtc
      301 gagcatgccg atgatgcgat cggaatcacg caccgacgag acctcggggt tggtgacaac
      361 gatcgcgata tcggcatagc gcatggccat catcgcaccc ttctcgatcc cggcggggct
      421 gtcgcaaatg atccagtcga atttttcccg cagttgctcg atgatcaacg cgactccggc
      481 ctcggtcagc gcgtccttgt cgcgagtctg tgacgcgggc agcagcgata gggtgtcgat
      541 gcgtttgtcg cggatcagcg cctgcgccaa tttggcgtcg ccctggatca cgtttatcaa
      601 atcgtaaacg actcggcgtt ctgcgcccat caccaggtcg aggttgcgca atccgacatc
      661 gaagtcgacg acaacaacat tttcgcccgc ctgggccagt gcggcaccta aagcggcggc
      721 tgtggtggtc ttaccgacgc cgcctttgcc ggaggtcacg accaggactt tggccatctt
      781 tatccccttt ccagttcagt agaaccccga ttgggtgatt caggtttagt ctatcggggt
      841 gattcgcatc aggtcgccat cgagccacgc acacgatggc gtgccgattc tctcggtcgg
      901 catgtcctcg gcggtttgat agacgccgtc aattgccacc agttcagcgt gcagtttacg
      961 acaatatatt cgcgcaccga tccggccgga gaggccggcg atcgctcgcc cgcgcagtgc
     1021 gccgtacacg tgaattgagc caccagcaac gacctcggcg cctgaggcga ccgagccgag
     1081 gatcgtaata tcgccttgct cgaacgtgat cgattgaccc gaacgcacag cgtgatcgat
     1141 caacagcgaa gctggctcaa ccggggagtg gatttgcggc gggggcgccg gttcgggtgc
     1201 ggctgctcgc gcggtgggcg cagccggttc gacctggacc acccgctcag gcacttcaat
     1261 cggttttgcc ggttgagtgg caccgggaag cttgcgtccc caggcttcca gtcccggcca
     1321 tgacgaatgg gcgccttcag tgccgatgat gtggatgccg cgatcgacaa tcgcatgcat
     1381 caatcccgcc acgtccccgg tttccctcgg caatgttccg aggtcaacga tcaccggcct
     1441 tccgtcaaag aagttcggag cccgctcgat ctgcgcatcg agcgaggcca gccagccggc
     1501 cagcggcggc tctggtgtca gcaccagcgc catgatggag cggccgcgca atcggatgaa
     1561 ggggcgagtc tcggtcatcg tcactccgaa tcggtagagg gcctgttaag gcgggtcaat
     1621 gggaatcact cgcgcgacca caaaatgctg tggataacgg cggctgcatc tactacccct
     1681 ggttcaggtg ccagccgtgg cgggctggct gccacactat gtcatggcct gggcgaccgg
     1741 ttccatattt gctgctgccg cattgacggt gcttcgtaat cgactgctga tgaccgattt
     1801 ggccggaaat ttacggccag acgcaggtcc agcatccgac ccattttgtc aggccaaacc
     1861 agtgttctgg agcgcacggg cgttgatcag aaccgtctgg ctgcagcgat tgcggaaccg
     1921 cggcagttgg gtcgggcggg ccttactcca gcccctcgta gaaatcgttc cccttgtcat
     1981 ccatcacgat gaacgcgggg aaattctcca cttcaattcg ccagaccgcc tccatcccaa
     2041 gctccggata ttccagcacc tggaccttgc ggatgcagtc ttgcgccaac cgggccgccg
     2101 ggccgccgac cgagcccaga taaaatccgc catgtgcttt gcaggcatcc tggaccgact
     2161 tggaccggtt gcccttcgcc agcatcacca acgagccgcc tgctgcctga aactcggcga
     2221 catagctgtc catccgtccc gcggtggtgg gaccaaagct gccggtggcg tagccttccg
     2281 gagtcttcgc cggacccgca taataaacgg gatggctctg caggtaatct ggcagtccct
     2341 ggccgctgtc caggcgctcc ttcagtttcg cgtgtgcgat gtcacgcgcc acgaccatcg
     2401 tgccagtcag cgccagccgg gttttgaccg gatattggga taattgcgcg cagatctcgg
     2461 ccatcggccg atcgagattc accgctacac tgtcgtcagt cagatgcgcg tcggtcgttt
     2521 ccggcaaata ctttgccgga tcggtttcca gttgctccag aaacacgccg tcgggtgtga
     2581 tctttgccag aatctgtcgg tcggcgctgc aagacacgcc gatcccgacg ggcaaagatg
     2641 caccatgccg cggaagccgg atgactcgca cgtcatgaca aaagtacttg ccgccgaact
     2701 gtgca
//
LOCUS       DATAVD010000481         4825 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2652228, whole genome shotgun sequence.
ACCESSION   DATAVD010000481 DATAVD010000000
VERSION     DATAVD010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4825
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2652228"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(92..1381)
                     /gene="purD"
                     /locus_tag="VHX39_08905"
     CDS             complement(92..1381)
                     /gene="purD"
                     /locus_tag="VHX39_08905"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019090613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEX3991275.1"
                     /translation="MRVLVIGSGGREHALCWAIAASPLLDKLWCAPGNPGTAAVAENL
                     PIGVMDFPGLVDFAVANKVDLVVPGPEAPLVGGITDAMEAAGITCCGPSAAAAQLEGS
                     KTFTKEIADAAGIPTAKWERFEDAESAREFVRRRGAPIVVKADGLAAGKGVVVAATED
                     EALTAIDAIMERLVFGEAGDAVVIEECLVGEEVSLFALCDGTSAVLLGSAQDHKRVGD
                     GDVGPNTGGMGAFAPVPSFPPAAEQAAFDRIILPALAEMAARGMPFRGVLFAGLMLTD
                     DGAKLIEFNVRFGDPECQMLLLRLRSDLLPALQAACDGELANFALRWFDTAAIAVVMA
                     ASGYPEAPARGGEINGLERAAAVPDVRVFHAGTEQDTEGRIKAVGGRVLTVCATGATV
                     QQARDRAYEAVDRIDWPTGFCRRDVGWRALVDRKAPP"
     gene            1431..2951
                     /gene="xseA"
                     /locus_tag="VHX39_08910"
     CDS             1431..2951
                     /gene="xseA"
                     /locus_tag="VHX39_08910"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010508235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEX3991276.1"
                     /translation="MDDPRPPGLNATNLPEFTVSEISGAIKRTLEGEFGRVRVRGEIT
                     EMKRYPSGHIYFSLKDEGAKLSGIVWRNSVPRLGLTPENGVEVIAIGRISAYGERSSY
                     QMIVERMEYAGAGALLARIEALRVRLAAEGLFDASRKQPLPVLPQVIGVITSERGAVI
                     QDIRTTILRRFPRNLLVWPVAVQGEGAAQQIANAIAGFDALPDDMRPDVLIVARGGGS
                     LEDLMAFNEEIVLRAAATCRIPLISAVGHETDTTLIDFVSDRRAPTPTAAAEMAIPAR
                     ADLLADVAQKAARLAGALAHVTRERRLRLLHAERLLPDLPSLLGTARQRLDDRGDRLI
                     MALPRLLERRAAALATFAGRLPDLPSMLVAARERVRDRAGRLVLALPNLVTTRSHALG
                     LAEQRLLSGLRQAVGSVHQRAGRVLGRLTDGPPRARLREARARLEGTAARLESVSPLA
                     VLARGYALVTDPAGVAITQAGGVKAGAKLRLRFADGEVRATADGARPGERQGMLPL"
     gene            complement(2958..4613)
                     /locus_tag="VHX39_08915"
     CDS             complement(2958..4613)
                     /locus_tag="VHX39_08915"
                     /inference="COORDINATES: protein motif:HMM:NF005470.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3991277.1"
                     /translation="MASDYTVGDLVADFLTACGVTTAFGIASVHNIPMLDAIGRRNTI
                     RFVMARGELGGAHMADGYARVSGDLGVLFSSTGPGAANAIGGLIEARFSGSPVLHITG
                     MTMTKFADRELGSVHDPIDQLGMMRSVCKAAYRVRSAHQALGVLTRAATEALTAPTGP
                     VSVEVPIDLQRVKIDRPAMLDSFVLPIPPGRTPSEIEMNELAARVKAAKRPMLWIGSG
                     ARAAGPEIHKLLDLGFTCVNSINGKGTVPEDHPMSLGGMHGNGMPGVQEFYATCDLLL
                     AVGTRLRARETGDLTVQLPSNIVHIDCDPAANGRTYPDTYFVCGDSKLTLQALLPRIN
                     GQMAIDTGYRAEFADLKRKVVTDFLGTLGVYGSFCQQLRNVLPKDAIWVRDVTQSNTT
                     WGDRVFPVYSPHQSVFPVGAGIGQGLSLGLGAAAAAGDRKTIVMTGDGGFFLNVGELW
                     TAVQENLDVVVMVMNDRGYGVIKRIQDATAQGRRFFADLQGPDIGKLAALSDIPYFKC
                     SSAETFGATVAQALAIKGLSMVEVDMTAVGEFPPYYPFNQRLG"
BASE COUNT          863 a         1605 c         1521 g          836 t
ORIGIN      
        1 tacgtatcat ggttttgccg ctgcggtgcc gacctgtatc acccggccga cagcatgact
       61 gccctggtct ggaagtgctg actatcggcg gttatggcgg cgccttccga tcgaccagtg
      121 cacgccaccc gacatcgcgg cggcaaaatc cggtcggcca gtcgatccgg tcgaccgctt
      181 cgtaagcccg atcccgcgcc tgttgcactg ttgccccggt agcacacacc gtaagcaccc
      241 ggccgccaac ggccttgatc cggccctcgg tatcttgttc cgttccggca tggaacacgc
      301 gaacatcggg tacggcagca gcacgttcca ggccgttgat ctcaccaccg cgagccggtg
      361 cctccgggta gccggaggca gccatgacta ccgcgattgc cgcagtatcg aaccaccgta
      421 gcgcgaaatt cgccagttcg ccgtcgcagg ctgcctgcaa cgcgggcaac agatcggaac
      481 gcaaccgcag caacaacatc tggcactcgg gatcgccgaa ccggacattg aactcgatca
      541 gtttcgcgcc gtcgtcggtc agcatcaggc cggcgaacag cacgccgcga aacggcatcc
      601 cgcgcgccgc catttccgcc agcgccggca ggatgatgcg gtcgaacgcc gcctgctcgg
      661 cggccggcgg gaacgacggt actggcgcga aggcgcccat gccgccggta ttcgggccaa
      721 catcgccatc gcccacgcgc ttgtggtcct gcgccgagcc gagcaacacg gccgaagtcc
      781 cgtcgcatag tgcgaaaagc gagacttcct ccccgacgag gcattcctcg atcaccaccg
      841 cgtcgccggc ctcgccaaag accagccgtt ccatgatggc atcgattgcg gtcagtgcct
      901 cgtcctcggt cgccgcgacc accacgccct tgccggccgc aagcccgtcg gccttgacga
      961 cgatcggcgc accacggcgg cggacgaatt cccgggcgga ctcagcgtcc tcgaagcgtt
     1021 cccatttcgc cgtcggaatg cccgcggcat cagcgatttc cttggtaaag gtcttgctgc
     1081 cttccagttg cgccgccgcg gcactgggtc cgcaacaggt gatcccggcc gcttccatcg
     1141 catcggtgat gccaccaacc aaaggtgctt ccggacccgg cacgaccaga tcgaccttgt
     1201 tggcaacagc gaagtcgacc agtcccggaa agtccatcac gccgatcggc aggttctccg
     1261 caaccgcagc ggtccctgga ttgcccggcg cgcaccacaa tttgtccagc agcggactgg
     1321 cggcgatcgc ccaacacaga gcgtgctcgc ggccgcccga tccgatcacc aagactcgca
     1381 tgcaccaccc ctggttccgt tgccgcgccg tgtagcatag gattcggccc atggacgacc
     1441 ctcgcccgcc tggtcttaac gcgaccaacc tgcccgagtt caccgtctcg gagatctccg
     1501 gtgcaatcaa acgcacgttg gagggcgagt tcggccgcgt ccgggtgcgc ggcgagatca
     1561 ccgaaatgaa acgctatccg tccgggcata tctacttttc cctcaaggac gaaggggcaa
     1621 agctctccgg catcgtctgg cgcaattcag tcccccgact gggcctgacg ccggaaaacg
     1681 gcgtcgaggt gatcgccatc ggccggattt ccgcgtacgg cgagcggtcg tcgtaccaga
     1741 tgatcgtcga gcggatggag tatgccggcg ccggcgcctt gctggcccgg atcgaggcat
     1801 tgcgggtccg cctggctgcc gaagggttgt tcgatgcgtc ccgcaaacag ccattgccgg
     1861 tactgccgca ggtgatcggc gtgatcacca gcgagcgtgg cgcggtcatc caggatatcc
     1921 gcaccacaat cctgcgccgt ttcccccgca atctgctggt ctggccggtg gcggtgcagg
     1981 gcgagggcgc ggcgcagcag atcgccaatg ccatcgccgg gttcgacgct ttgccggatg
     2041 acatgcgccc cgacgtgctg atcgtcgccc gcggcggcgg cagtctggaa gacctgatgg
     2101 cgttcaacga ggagatcgtg ctgcgcgccg ccgccacctg ccggattccg ctgatctcgg
     2161 ccgtggggca tgagacggac acaacgttga tcgacttcgt ctccgaccgc cgtgcaccga
     2221 cgccgaccgc ggccgccgag atggcgattc cggcgcgggc cgatttgctc gccgatgtgg
     2281 cgcagaaggc agctcgactg gcgggcgctc tggcgcatgt gacgcgggaa cggcggttgc
     2341 ggttgctcca cgcggagcgg ttgttgccgg atctgccctc actgttgggc acggctcggc
     2401 aacggttgga tgatcgcggc gaccggctga tcatggcgtt gccccggctg ctggagcggc
     2461 gggctgccgc attggcaacg tttgccggac ggctgcccga tttgccatcg atgctggttg
     2521 cggctcggga acgggtgcgc gatcgcgccg gacgcctggt gttggcgttg cccaatctgg
     2581 taacgactcg cagtcacgca cttggtctgg cggaacaacg attactgtcg gggctgcgcc
     2641 aggcggtcgg gtccgtgcat cagcgcgccg gccgggtact gggccggttg acggacgggc
     2701 cgccgcgggc gcggttacgt gaagcgcgtg ctcggttgga ggggaccgcg gcgcggctgg
     2761 aatcggtgtc gcccctggcg gtgctggccc ggggctatgc gcttgttacg gatccggcag
     2821 gcgtggcgat aactcaggcg ggcggcgtta aggcgggggc aaaactgcgg ttgcgctttg
     2881 ccgatggcga ggtacgggcg acggcggatg gcgcccggcc aggagagcgg caggggatgc
     2941 tgccgctgta aacgttgtca gcccagccgc tgattgaacg gataatacgg cgggaattca
     3001 ccaactgcgg tcatgtcgac ctcgaccatg ctcagtcctt tgatcgccag cgcctgggcc
     3061 acggtggcac cgaacgtttc ggcactgctg catttgaagt acggaatgtc cgacagcgct
     3121 gccaacttac cgatgtccgg accttgcaga tcggcaaaga accgccggcc ttgcgccgtc
     3181 gcatcctgga tccgcttgat caccccgtaa ccgcgatcat tcatgaccat cacgaccacg
     3241 tcgagatttt cctgcaccgc agtccacagc tcaccgacgt tgaggaaaaa cccaccatct
     3301 ccggtcatca cgatcgtttt acgatcaccc gccgcagcag ccgcgccaag gcccagagac
     3361 aggccctgcc cgatgccggc accgaccggg aatacgcttt gatgcggcga gtaaaccggg
     3421 aagacgcgat cgccccaggt cgtgttgctc tgcgtcacgt cgcgaaccca gatcgcatcc
     3481 ttcggcaaca cgttgcgcag ttgttggcaa aatgagccat agacccccag ggtgccgaga
     3541 aagtccgtca caaccttgcg cttcagatcg gcgaactccg ctctgtagcc ggtatcgatc
     3601 gccatttgcc cgttgatccg cggcaacagc gcctgcaagg tcagcttcga gtcaccacac
     3661 acgaaatacg tgtcgggata cgtgcggccg ttcgccgccg gatcgcaatc gatatgcaca
     3721 atgttcgacg gcagctgcac cgtcagatcg ccggtctccc gcgcacgaag tctggtgccg
     3781 acagccagca acaggtcgca tgtcgcatag aattcctgga ctcctggcat gccgttgccg
     3841 tgcatgcctc cgaggctcat cggatgatcc tcgggcacgg ttcctttgcc attgatgctg
     3901 ttgacacagg taaagcccag atcgagcaat ttgtggattt ccgggccggc ggcgcgagca
     3961 cccgaaccga tccacagcat cgggcgcttt gctgccttca cccgcgccgc gagttcgttc
     4021 atttcgatct cggacggcgt gcggccaggc gggatcggca gcacgaagct gtccagcatt
     4081 gccggccggt cgatctttac ccgttgcagg tcgatcggga cttcgacgct gacgggaccg
     4141 gtaggtgcgg tcagtgcctc ggtcgcggct cgggtcagca cgcccaacgc ctggtgtgca
     4201 gaacgcacgc gataggcggc tttgcacacc gaccgcatca tgccgagttg atcgatcgga
     4261 tcatgcaccg atcccagctc gcgatcggca aatttcgtca tggtcatgcc ggtgatatgc
     4321 aacaccgggg agccggagaa gcgcgcctct atcaggccgc cgatggcatt tgccgcaccc
     4381 ggtccggtcg aggaaaacag cacgcccaga tcgccggaga cgcgggcgta gccatcggcc
     4441 atgtgggcac cacccagctc gccgcgcgcc atgacgaagc ggatcgtgtt gcgtcggccg
     4501 atcgcgtcca gcatgggaat gttgtgcacc gaggcgatgc cgaacgccgt cgttacgccg
     4561 catgccgtca gaaaatcggc aaccagatcg ccgaccgtgt agtcgctggc cattgctgtc
     4621 gtctccattt cgaatgggca ggctgaaaca ccggcggcgg tccgtcaaca cgctcggcgt
     4681 tcggcccgca ccaacagagc gccggccagg atgatcaacg cggcaccgaa aaacaccgag
     4741 gccggcggaa tatccagcca tatccaataa ccgagcaaaa atgcccatgg caacgccgag
     4801 tactccacgg tggccatgac cgagg
//
LOCUS       DATAVD010000482         2195 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2652270, whole genome shotgun sequence.
ACCESSION   DATAVD010000482 DATAVD010000000
VERSION     DATAVD010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2652270"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            22..1128
                     /locus_tag="VHX39_08920"
     CDS             22..1128
                     /locus_tag="VHX39_08920"
                     /inference="COORDINATES: protein motif:HMM:TIGR01525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042625 - ATPase-coupled ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEX3991278.1"
                     /translation="MVAAVSVVIIACPCALGLATSMSIMVGVGKGAGAGVLIKNAEAL
                     ERFEKVDTLVVDKTGTLTEGRPRLIAVVAAEGFEEEKTLSLAASLERSSEHPLAAAIL
                     AAVKDRNAPLRDVADFLTVTGKGITGTVDSKRVAIGTTQLLKELGADTGALGARAEEF
                     RKDGATAMFVAVDGRAAGILAIADPIKQTTLGALAQLREENIRIVMLTGDNRTTAEAV
                     AKKLGITEIEAGVLPDGKNAIVRKLRSEGRIVAMAGDGVNDAPALAEADVGVAMGTGT
                     DVAIESAGMTLVKGDLAGIVRARALSRAMMSNIRQNLVLAFVYNVIGIPIAAGALYPE
                     FGLLLSPVIAAAAMSLSSISVIGNALRLRWLNLA"
     gene            1142..1288
                     /locus_tag="VHX39_08925"
     CDS             1142..1288
                     /locus_tag="VHX39_08925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991279.1"
                     /translation="MRAIIKDEGLALETEKIENDPVLPPSQSRAGIINLIRQRYTKPT
                     TPER"
     gene            1376..1549
                     /locus_tag="VHX39_08930"
     CDS             1376..1549
                     /locus_tag="VHX39_08930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991280.1"
                     /translation="MMASNTQRDNLASYPAEKARQGEIILKRPWQRAVFIAGLAGGVL
                     LLAVALFFPGAGH"
     gene            complement(1550..1990)
                     /locus_tag="VHX39_08935"
     CDS             complement(1550..1990)
                     /locus_tag="VHX39_08935"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX3991281.1"
                     /translation="MEVQDLMTRDVAMINSDQTLQKAARLMAELDVGILPVGEGDRLV
                     GMITDRDIAVRGLAKGKGPNTKVREVMTPEVKYCFADQEIDEIAVNMADIQVRRLPVL
                     DRDKRLVGILSLCDIAVSDDPEQAIEALSGISQPTNGGTHTPAA"
BASE COUNT          426 a          650 c          691 g          428 t
ORIGIN      
        1 caaccggcct tcgccaacgc gctggtggca gctgtgtctg tagtcatcat cgcctgcccc
       61 tgcgcgctcg gactggcaac atcgatgtcg atcatggtgg gcgtcggcaa aggtgccggt
      121 gctggtgtcc tcatcaagaa cgccgaagcg ctggagcggt tcgagaaggt cgatacgctg
      181 gtggtggaca agaccggcac gttgaccgaa ggccggccgc ggctgatcgc cgtggttgcg
      241 gcggagggtt tcgaggaaga aaagacgctc tcactggccg caagcctcga acggtccagc
      301 gaacatccgc tggcggccgc tatcctggcg gcggtgaaag atcgcaatgc cccgctgcgc
      361 gacgtggcgg atttcctgac cgtcaccggc aagggcatta ccggcacagt agacagcaaa
      421 cgcgtcgcca ttggcacaac gcaactgctg aaagaactag gcgccgacac cggcgcgctg
      481 ggtgcgcgcg cggaagaatt ccgcaaggat ggcgcaaccg caatgtttgt ggcggttgat
      541 ggacgagccg ccggcattct cgcaatcgcg gatccgatca agcagacgac gctgggcgcg
      601 ctcgcccagt tgcgcgagga aaacattcgt atcgtgatgc tgacgggcga caaccgcacg
      661 accgctgaag ctgtggctaa gaagctcggc atcacagaaa tcgaggcggg cgtcctgcct
      721 gacggcaaga acgcgatagt gcgcaagttg cgcagcgaag gccgtatcgt ggcgatggcg
      781 ggcgatggcg tgaacgatgc accggccctg gcagaagccg atgtcggcgt cgccatgggc
      841 accggtactg atgtcgcgat cgaaagtgcg ggcatgacac tggtgaaggg cgatctagcg
      901 gggatcgtgc gggcgagggc attgagccgt gctatgatga gcaatatccg gcagaacctc
      961 gtgcttgcct ttgtctataa cgtgatcggg ataccgattg cggcgggcgc gctctatccg
     1021 gaattcgggc tccttctcag tccggtcatc gcggcagcgg caatgagcct cagttcgatc
     1081 tcggttatcg gcaatgcgtt acgcctgcgc tggctgaacc ttgcttaaga gagccaatgg
     1141 gatgcgcgcg atcattaagg atgaagggct ggctctggag acagaaaaga ttgaaaacga
     1201 ccccgtgctc ccgccgtcgc agagccgcgc cgggatcatc aacctgatcc gccagcgcta
     1261 taccaagccg actacgccgg aaaggtaggt gcgcttcgcc tgtagcagtg acttttggtg
     1321 ggatagcggc cgcctcgggc gcgtttcctc atgatgcaaa caggcaggag agtgcatgat
     1381 ggccagcaat acccaacgag acaaccttgc ctcctatccg gcggaaaaag cccgccaggg
     1441 ggaaatcatc ctcaagcgtc cctggcagcg cgccgtattc atcgccggcc ttgccggcgg
     1501 cgtgctgctg ctggcggttg cactgttttt tcccggtgct ggccattaat taggcggccg
     1561 gagtatgcgt cccgccattg gtgggctgcg aaatcccgct caaggcttcg atcgcctgct
     1621 cggggtcgtc gctcacggcg atatcgcaca atgagagaat gccaaccaga cgcttgtcgc
     1681 gatcgagtac cggcaggcgc cggacttgga tatccgccat gttcacggca atctcatcga
     1741 tctcctggtc cgcgaagcaa tatttcactt cgggcgtcat cacctcgcgc accttcgtgt
     1801 tggggccttt gccctttgcc aggccgcgga cggcgatatc ccggtcggta atcatgccca
     1861 ccaaccggtc accttcaccg accggcagaa tgccgacatc cagctctgcc atcagccgcg
     1921 cggccttctg cagcgtttgg tccgaattta tcatcgcgac atcgcgggtc attagatctt
     1981 gaacttccat gggaacctcc tgttcctggg ctgggtgatt ggggtaggga cagacgagcg
     2041 atatctcgct ccctctgccg tctgtaccgt cttcgcaacc actggcggac gagtgttgac
     2101 ccgtaatggc ttgccaatgg cgcttagccc cagagcggca gaaccggttt tatagttccc
     2161 tgccgccctt tgtgatcttc gagacatcct ttcgg
//
LOCUS       DATAVD010000483         1857 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2652318, whole genome shotgun sequence.
ACCESSION   DATAVD010000483 DATAVD010000000
VERSION     DATAVD010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1857
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2652318"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..618
                     /locus_tag="VHX39_08940"
     CDS             <1..618
                     /locus_tag="VHX39_08940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit B"
                     /protein_id="HEX3991282.1"
                     /translation="IAARIAQDIPEGWFVNLGIGIPTKVSDFVQDREVIFHAENGVIG
                     IGPAPDPERINPYLVNAGVQHITLITGAALVHHADSFAIARGGHLDLCVLGAFEVAEN
                     GDIANWARSPDEPIKQVGGAMDLAVGAQRLWVAMEHTTKSGGSRIRTACSYPLTAKGV
                     VKRVYTDLAVLEVTPKGFAVLDMIPGMTRDALQARTEATLIWRQA"
     gene            complement(634..>1857)
                     /locus_tag="VHX39_08945"
     CDS             complement(634..>1857)
                     /locus_tag="VHX39_08945"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3991283.1"
                     /translation="TGSDIRWLAVGPTFMLCVGGFAASFVSDHWSRKTVMLIGVIATT
                     FCTLLIPLVQNAEQLILLRLLTGLGAGGAVSAAFPIAAELMPAQHRRTYGAVYEVALA
                     TSFTLVPFLAWLLAADANAFRLLALPGGLAVTVVPVLVWFVIPESPRWHLGQGRPQVA
                     IGIVNGIIKRCGDPVPPLTLQDLGGDRAGIREKLPPYWAIFARGQLRWTVVGILAGIC
                     AGTAYFLIAVLLPKALVDQGAAVSLSFGLSSLVFFASIPGKAFTGFLMEIIGRRWTIA
                     YALAGSLPGILLMLVAHQAGQYATVVMVTGALITGFTVLSAFTATRVYLSEQFPTALR
                     GRGHIFGESFGRLFAGVLAPFLMEPYTASPTIFFGTIFVVVAIGALIPRVFGRETVGQ
                     LETVTEATSGLRLAA"
BASE COUNT          415 a          616 c          545 g          281 t
ORIGIN      
        1 atcgccgccc gcatcgcgca ggacatcccg gagggctggt tcgtcaatct gggcatcggc
       61 attcccacga aagtctccga tttcgtgcag gaccgcgagg tcatcttcca cgccgaaaac
      121 ggcgtcatcg gcatcggccc cgcaccggac cccgaacgca tcaatccgta cctggtcaac
      181 gccggcgtgc aacatatcac gctgatcacc ggtgccgcgc tggtgcatca cgccgacagt
      241 tttgccatcg cccgcggcgg ccatctcgac ctgtgtgtcc tcggcgcttt cgaggttgcc
      301 gaaaacggcg acatcgccaa ttgggctcgt tctcctgacg aaccgatcaa acaggtcggc
      361 ggtgccatgg accttgcggt aggcgcacaa cggctctggg tggcgatgga gcacaccacc
      421 aaaagcggcg gctcgcggat tcgaaccgcc tgctcgtatc cgctgaccgc caagggcgtg
      481 gtgaaacgcg tctacaccga cctcgcggtg ctggaggtca cgccgaaagg ttttgccgtc
      541 ctcgacatga tccccggcat gacccgtgat gcgttacagg cccgcaccga agcgacgctg
      601 atctggcggc aagcctgacg gccaccccca gtcctatgcc gcgagtctga gcccgctggt
      661 cgcctccgtc accgtttcca gttgtccaac cgtctcacgg ccaaacaccc gcgggatcag
      721 cgcgccgatt gcaacgacca caaaaatcgt cccgaagaag atcgttggtg acgcggtgta
      781 aggctccatg agaaacggtg ccaacacgcc ggcgaacaat cgcccgaacg actcgccgaa
      841 aatatgtccg cgtccgcgca gcgccgttgg gaattgctcc gagagataga cgcgggtcgc
      901 ggtaaacgcc gacagcacag tgaacccggt gatcaatgcg cccgtcacca tcacaaccgt
      961 tgcatattga cctgcctgat gcgccaccag catcagcaaa ataccgggca acgatccggc
     1021 gagcgcatag gcgatcgtcc agcgccggcc gatgatttcc atcaggaagc cggtgaaggc
     1081 cttgcccggg atgctcgcga agaacaccag cgagctaaga ccgaaactca ggctgacggc
     1141 cgcgccctga tcgaccagcg ctttgggcag caggacggca atcaggaaat aggcggtgcc
     1201 tgcgcaaata cctgccagaa tgccgaccac cgtccagcgc agttggccgc gggcgaagat
     1261 ggcccaatag ggcggcagct tctcccggat ccccgcgcga tcgccgccaa ggtcctgcaa
     1321 ggtcagcggc ggcaccggat caccacagcg tttaatgatc ccattgacga tgccgatagc
     1381 aacctgcggc cggccttggc ccaaatgcca acgtgggctt tccggaatga caaaccagac
     1441 cagcacaggc acgacagtca ccgccaaccc gccgggcaat gccaacagcc ggaaagcgtt
     1501 ggcgtcagcc gcgagcaacc aggccagaaa tggcaccaaa gtgaaggaag tcgccagcgc
     1561 cacttcgtaa actgcgccat aggtgcgccg atgctgtgcc ggcatcagtt cggcggcgat
     1621 cggaaatgct gccgagaccg cgccgcccgc gcccaggccg gtcaacaggc gcagaagaat
     1681 cagttgctcg gcattttgca caagggggat cagcaacgtg caaaaggtgg tcgcgatcac
     1741 gccaatcagc atgaccgtct tacggctcca atggtcagag acgaatgagg ccgcgaaccc
     1801 gccgacacac aacataaagg tcggaccgac agcaagccag cgaatgtcag acccggt
//
LOCUS       DATAVD010000484         3557 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1908177, whole genome shotgun sequence.
ACCESSION   DATAVD010000484 DATAVD010000000
VERSION     DATAVD010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3557
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1908177"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..416
                     /locus_tag="VHX39_08950"
     CDS             <1..416
                     /locus_tag="VHX39_08950"
                     /inference="COORDINATES: protein motif:HMM:NF025833.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4430 domain-containing protein"
                     /protein_id="HEX3991284.1"
                     /translation="INLWRISMPVTVSIAINGNVVRTIANVPWSPGMNAQHALEQAYA
                     TGTGYCFVLQYFGVPLGYEVMAFDGITAQQGTDTGLYWEFVYNGNPARQGIDSTILND
                     GDTLLFSYVAYSEAVHSRKRVGAIRSALRARQRAS"
     gene            932..1312
                     /locus_tag="VHX39_08955"
     CDS             932..1312
                     /locus_tag="VHX39_08955"
                     /inference="COORDINATES: protein motif:HMM:NF022610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2946 domain-containing protein"
                     /protein_id="HEX3991285.1"
                     /translation="MRRRLRKFLPIVMLALAVQILAPIAACWAAGVAVSDPLGAAAIC
                     HDVGGQADNQGNQPDQSGRHAHDGTCALCCLAHAGASMDTPKTATAEPFRHSLRVVWH
                     DVASELRDSHTSGHAQARGPPSIS"
     gene            1405..>3557
                     /locus_tag="VHX39_08960"
     CDS             1405..>3557
                     /locus_tag="VHX39_08960"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX3991286.1"
                     /translation="MFRFHALGGVSVAALQVALLAPVAVANAQSGEQALPPVTVEAPR
                     APVKRITPKPGERVAVRKPPAAAPERKRPVVVVDGGSNANASPDTPPIKQRFSLPQQS
                     YSITAKQIDETINLKDPEDAVKYMPSLFVRKRNDGDNQAVLATRSWGLSSSARTLIYY
                     DDLLVSALIGNNNSGASPKWNLIVPEAIARIDFLDGPFAAAYPGNSIGGVLLITSKMP
                     DHAFATAKETVSVMPWNQYGTKDTYGSTVTSAAAGNRVGNVSWLASVNYTDSYQQPLT
                     YTTNGSLPAGTTGGFVALNKQGLVADVVGTGTLAHSQQTSGNLRVAYDVTSQVQATYS
                     LGIWNNVQTSNPQSYLTSTATGLPTFAGIAGFASNKYIWDQTHMSNAISLKSDTKGTY
                     DFDLSASSYNYLQDIQYNPFTVAPTGVGYSTNGKITRNDGTNWQNVDAKGIWRPYGFD
                     GPHEVSFGLHGDRYELENPVYLSSVWNATPATGTGQLFSDGVGETRTAALWMQDAWKI
                     TPELKLTLGGREEVWRALDGFNLNSVAKGGTGTPAVPIPTLISNSINQPGLGSTNFSP
                     KASLSYDPNKQWNVTVNFGEAYRYPTVTELYQNISVAGVATFANPNLTPEQDLNGQFV
                     VERKWTDGRIRFTLFDEHVHNAIISQTNLVNQVPTTTIGNVDAIRMKGFEIAAEKDNV
                     AIAGLKLFGSVTYVDSRIVSDPTWAGTNPLTGVPDT"
BASE COUNT          746 a         1088 c         1051 g          672 t
ORIGIN      
        1 gtatcaatct atggaggata tcgatgccgg tcaccgtttc catagccatc aacggcaatg
       61 tggtgcgtac gatcgcaaac gtcccctggt cgcccggcat gaacgcgcag cacgcgcttg
      121 agcaggccta tgccaccggt accggatatt gtttcgtgtt gcagtatttt ggcgttccac
      181 tcggttatga agtgatggcc tttgacggca ttaccgcgca gcaggggacc gacaccggat
      241 tgtactggga attcgtctac aacggcaatc ctgcgcggca ggggatcgac agcacgatcc
      301 tcaatgacgg cgacacgctg ctgttcagct acgtcgccta tagcgaggcg gttcattcgc
      361 gcaaacgcgt cggcgccatc cgcagcgcat tgcgcgcgcg gcaacgcgca tcctgacatt
      421 tcaatttgcc gcacgcgaga atttgaaaat tggcgcgcac tcaaaacggg cacgccacgc
      481 aactgaaaga tgctcgaaaa aaagagcagg gcacgaagcc ctgctctaaa aattgtgtcg
      541 accctatttc cccgcaagtt cgatttgatc ttgatttgac ggggcgacgc tgcttgtgcg
      601 cgccagggct cctcccgaga cttggaccac cagactttga ccttgcggcg agcctgagcc
      661 cgcagtccta gaccatcttt ttcgccttgt caccaatttc agcaacgatt gttcaaaatt
      721 cgagcaatct gcgaaatgat tgggacttaa ccgatttggc ccgcagcaaa cgcgattttg
      781 acgcgccgga tcgggcctcc gaagggctgc ccaaacaata ccggtaatgg cccaattatt
      841 ccccgaaaac cgcaagatat cgttgggaac ctgatctcga cttcggactc tgctgatgat
      901 tagatcgtcc gatcgggaag ggcagtgata gatgcgccgg cggttacgga agtttcttcc
      961 gatcgtcatg ttggctttgg cggtgcagat tttggcaccg atcgcggcct gctgggctgc
     1021 cggtgtcgcc gtttccgacc cgctgggcgc ggcggccatc tgtcacgacg tcggtggcca
     1081 ggccgacaat cagggcaacc agccggatca atcggggcgc catgcccatg acggcacctg
     1141 cgcgctgtgt tgcctggccc acgccggcgc ctccatggac acgcccaaga ccgcgaccgc
     1201 ggagccattt cggcattcgc tgcgggtggt ctggcatgac gtagcatccg aactgcggga
     1261 ttcccacacc agcgggcacg cccaggcccg cgggccgccc tcgatttcct gactatccca
     1321 acacctcacg atcggtgcgg ccacggccgc catcgatgat ttcgttgagc aggctggcga
     1381 ctgcgccagt gtcaggactt tcggatgttt cggtttcatg ccctcggggg tgtgagcgtc
     1441 gctgccttgc aggtggcgct gcttgcgccg gtcgccgtgg caaatgcgca aagcggcgag
     1501 caggcgctgc cgccggtgac ggtcgaggcg ccgagagcgc cggtgaaacg catcacgcca
     1561 aagccaggcg agcgtgttgc cgtacgaaag ccgccggccg ccgcgccgga acgcaagcgg
     1621 ccggtcgtgg tcgtggacgg cggcagcaac gccaacgcgt cgccggacac gccgccgatc
     1681 aagcagagat tttcgttgcc gcagcaatcc tacagcatca cggccaagca gatcgacgaa
     1741 accatcaacc tcaaagaccc tgaagatgcc gtcaaataca tgccgagcct gttcgtgcgc
     1801 aaacgcaacg acggcgacaa ccaggcggtg ctggcgaccc ggagctgggg cctcagttcg
     1861 agcgcgcgca cgctgatcta ttacgacgat ctgctggtct cggcgctgat cggcaacaac
     1921 aattcaggcg catcgccgaa atggaacctg atcgtgccgg aggcgatcgc gcggatcgat
     1981 ttcctcgacg gcccgttcgc ggcggcctat cccggcaact cgatcggtgg agtgttgctg
     2041 atcacctcga aaatgccgga ccatgccttt gccaccgcca aggagacggt ctcggtgatg
     2101 ccgtggaatc aatacggcac caaggacacc tacggcagca ctgtaaccag cgccgccgcc
     2161 ggcaatcgcg tcggcaatgt gtcgtggctc gcgagcgtca actatacgga cagctatcag
     2221 cagccgctga cctacaccac caacggatcg ctcccggcag gcaccacggg tggattcgtg
     2281 gcgctgaaca agcagggatt ggtcgccgat gtcgtcggca ccgggacgct ggcgcattcg
     2341 cagcagacgt cgggcaatct gagggttgcc tatgacgtga cgtcgcaagt gcaggcgacc
     2401 tattcgctcg ggatctggaa taacgtccag acttcgaatc cgcagagcta tctgacgtcc
     2461 acagctacgg ggttgccgac gttcgcaggg atcgcgggct ttgcgagcaa caagtacatc
     2521 tgggaccaga cgcacatgag caacgcgatt tcgctcaaga gcgataccaa aggcacctac
     2581 gatttcgatc tgtcggcgtc gagctacaat tatctgcagg acatccagta caatccgttc
     2641 accgttgcac cgaccggcgt cggttactcc accaacggca agatcacccg caacgacggc
     2701 accaattggc agaatgtcga tgccaagggc atttggcgtc cgtatggctt cgacggtccg
     2761 catgaggtct cattcggcct ccacggcgat cgctatgaac tcgaaaaccc ggtctatcta
     2821 tcgtcggtct ggaacgccac gccggccacc ggcacgggtc agctgttttc cgatggcgtc
     2881 ggcgagaccc gcaccgcggc gctgtggatg caggacgcgt ggaagatcac gccggaactg
     2941 aaattgacgc tgggagggcg cgaagaagtc tggcgtgcgt tggatggctt caacctcaac
     3001 agcgttgcca agggtggcac cggaacgccc gcggtaccga ttccgacgct aatatcgaat
     3061 tccatcaatc agccgggtct gggctcgacc aatttctcgc cgaaggcgtc gctctcctat
     3121 gatccgaaca agcaatggaa cgttaccgtc aattttggcg aagcgtaccg ttatccgacc
     3181 gttaccgaac tctaccaaaa catctcggtc gccggcgttg cgaccttcgc caatccgaac
     3241 ctgacgccgg agcaggatct gaatgggcaa ttcgtcgtcg agcgcaaatg gaccgatggc
     3301 cggatcaggt tcactttatt cgacgagcac gttcacaacg cgatcatctc gcagaccaac
     3361 ctcgttaacc aggtgccgac cacgaccatc ggcaatgtcg atgcgatccg catgaagggc
     3421 ttcgagatag ccgcggaaaa ggacaatgtc gcgattgccg gcctgaaact gttcggcagc
     3481 gtgacctatg tggattcacg gatcgtgtcg gatccgacct gggccggaac gaatccgttg
     3541 accggcgtgc ccgacac
//
LOCUS       DATAVD010000485         2158 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_603547, whole genome shotgun sequence.
ACCESSION   DATAVD010000485 DATAVD010000000
VERSION     DATAVD010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_603547"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..549)
                     /locus_tag="VHX39_08965"
     CDS             complement(<1..549)
                     /locus_tag="VHX39_08965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991287.1"
                     /translation="MQRALAGGVPVQMLLVLQRTAGNQAVNQLLRQYKSSRQSPPVLG
                     LPAVQRCGGKPCNCSPQERAAHAQVQSMDEEQSLSASIGVPAAVQRDADDDDGGGDAA
                     DAAEQAADVAANAADASSAAGADAAVGANQDTAEPAQDSTEGGSASNDSEDATAAEPA
                     DQSAEAPAQDGGEGASAPADSND"
     gene            complement(994..>2158)
                     /locus_tag="VHX39_08970"
     CDS             complement(994..>2158)
                     /locus_tag="VHX39_08970"
                     /inference="COORDINATES: protein motif:HMM:NF042530.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF6596 domain-containing protein"
                     /protein_id="HEX3991288.1"
                     /translation="DACEDAVQEALLAAAGQWPEQGIPQNPWGWLIAVASRRMTDQIR
                     GDIARRRREEAVAAQPSPADLTATDPGGEQPVERDDTLILLFMCCHPALSPSSQVALT
                     LRAVGGLTTAEIARAFLVPEATLAQRISRAKRSIKTSGIPFSMPPEAEQADRLRVVLH
                     VLYLIFNEGYTATSGPDLQRGELTREAIRLTRTVHRLLPDGEVAGLLALMLLTDARRS
                     ARTGPDGALISLAEQDRSLWDQAAIQEGVALITDSLARTPIGPYQLQAAIAAIHDEAA
                     NAKHTDWPQILALYELLERVSAGPMVTLNRAVALAMVHGPRAGLALLTSLETDERLVG
                     HHRLDAVRAHLLEMAGDLEGARAGYRIAARRTTSLPEQRYLESRAAKQTAANL"
BASE COUNT          372 a          679 c          710 g          397 t
ORIGIN      
        1 atcgttggag tcggccgggg ccgatgcgcc ctcaccccca tcctgagctg gcgcttccgc
       61 gctctgatca gccggctcgg cggcggtcgc gtcctccgaa tcattcgagg ccgacccacc
      121 ttcggtcgaa tcctgagcgg gctccgccgt atcctggttg gcgccgacgg cggcgtccgc
      181 cccggccgcg ctcgatgcat cggcggcatt ggcggcaaca tcggccgctt gctctgctgc
      241 atcggcggca tcgccgccgc catcgtcatc atcggcgtcg cgttgtacgg cggcaggcac
      301 gccgatggag gcggagagac tctgttcctc gtccatcgac tgcacctggg cgtgtgccgc
      361 cctctcctgg ggagagcaat tacagggctt gccgccgcaa cgctgtactg ccggcaggcc
      421 gagaacgggt ggcgattgtc ggctgctctt atactgccgc aacaattggt tgaccgcttg
      481 attaccggcc gtgcgctgca gcacaagcag catctggaca ggcacgccgc cggcgagggc
      541 gcgttgcata ccatccccac cttgttgggt agcgcgttgc aggtttgact gtgatgcctg
      601 ctctgaagcg accggggcaa acatgaatca gcgaccttcc tggaaacggt agaatcggta
      661 cgggttcaag aagcacggca tccgtaccgt gcctggacgt gatcgtaatg gtgtgtcgtt
      721 ccgagttagg gcataagcga tccggcgccc cgttgtgttg attatgcggc ctcgacgata
      781 tgaacgccac acagatcggc agttttaccc acgaagttgc ctaccaggcg tcattcacaa
      841 gcggtttagg tcagcgcggg ctggtcaggg tcgcaatatg cagcggatcg gtttcccgat
      901 cttgctttga tcgacagtgc gatacagtcg aaccgggcta tccttcttca caccagccgg
      961 cagtcactga aagggcgcag tcgccggaga ggtctacaga ttggccgcgg tctgcttggc
     1021 tgcccggctc tcaagatagc gctgttcagg gagactggta gtgcggcgcg cggcaatccg
     1081 gtagccggcg cgggcccctt caaggtcgcc ggccatctcc aagaggtggg ctcgcaccgc
     1141 gtcaagccga tgatgtccga ctaagcgctc gtccgtttcc agggaggtga gtagggcgag
     1201 accggcccgt gggccatgca ccatggcgag cgccacggcg cggttgagcg taaccatcgg
     1261 accggccgac acccgttcga gcaattcata gagagcaaga atctgcggcc agtccgtgtg
     1321 cttggcgttc gccgcttcgt cgtggatcgc ggcgatcgct gcctggagtt ggtagggacc
     1381 gattggggtc cgcgccaatg agtcggtgat cagggcgacc ccttcctgaa tggcagcctg
     1441 atcccagagg cttctatcct gctcggccaa cgagatcaaa gcgccgtcgg gcccagtgcg
     1501 cgccgaacgt cgcgcatcgg tgagcagcat aagggccagc aatccagcca cctctccatc
     1561 gggcagcaat cgatggacag tgcgggtcag gcggatcgcc tcccgggtca gttcgccgcg
     1621 ctgcaaatca gggccggagg tagcggtgta gccctcgttg aaaatcagat agagcacatg
     1681 caacactacg cgcaaccgat cggcctgctc ggcttccgga ggcatgctga acggaatacc
     1741 gctggttttg atgctccgtt tggcccggct gatccgctga gccagggtcg cctccggtac
     1801 gagaaaggcc cgggcaatct ccgccgtggt cagaccgccg accgcccgca gagtaagcgc
     1861 aacctgagag gatggggaca gggcgggatg gcaacacatg aacagcagga tcagcgtatc
     1921 gtcccgctcc acgggctgct cgccgccggg atcggtggcc gtgagatcgg cgggagacgg
     1981 ttgggccgca accgcctcct cgcggcgtcg gcgggcgatg tcgccccgta tctggtcggt
     2041 catacggcgc gaggcaactg cgatcagcca gccccaggga ttctgtggta tcccttgctc
     2101 gggccattgg ccggcagcgg ccaacagcgc ttcctgcacc gcgtcctcgc aggcgtcg
//
LOCUS       DATAVD010000486         1710 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_792695, whole genome shotgun sequence.
ACCESSION   DATAVD010000486 DATAVD010000000
VERSION     DATAVD010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_792695"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1565)
                     /locus_tag="VHX39_08975"
     CDS             complement(<1..1565)
                     /locus_tag="VHX39_08975"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3991289.1"
                     /translation="MDGHRFGLSVSPRRREDARFLIGQGAYLDDLVFPDKAHAVFVRS
                     PHAHAGIASIDTTHARAAPGVLAVLTAADVAADGLNDLPPTVEANALTGERFQFTPMP
                     LLARDEVRYVGQLIALVVAETHAQALDAAELVEATYDARPVVMTPEAAAETPSLLCMD
                     WSLGDAASAFEQAAHVVSLRLHNHRIVTNPMEPRGVIGVYDPAAEQFIAHVSSQSLHG
                     NRDAIARVLNVPSERLRFVAPDVGGGFGAKNFPYPEQALIPWAAKRCGRPVKWIASRT
                     EVFISDHQARDHLANAELALDADGRFLGLRVDSIANIGAYMCGGAGGLQTFQYPHLQG
                     GIYNIPQVGLRIRTVLTNTTPIGVTRGPGFAEAINVIERLIDAAARQCGFDRATLRRR
                     NMAHTPMTNALGYAVDSGAFAETFDKAMTAADLAGFAARRRDSEARGSLRGLGFACHI
                     KATGGNPSENVDIRFADDGSVLLITGTQTIGQGHETTFPQILAHCLGIPNDLVRLVQG
                     DTGVIRAGGGHGSS"
BASE COUNT          314 a          517 c          579 g          300 t
ORIGIN      
        1 gaactgccat ggccgccgcc ggcgcgaatc accccggtgt cgccttgcac gagacgcacg
       61 agatcgttgg gaatgcccag acaatgcgcc aggatctgcg gaaatgtcgt ttcatgaccc
      121 tggccaatgg tttgcgttcc ggtgatcagc agaacgctgc cgtcgtcggc aaagcgaatg
      181 tcgacatttt ccgaaggatt gccgccggtg gctttgatgt ggcaggcgaa gcccagaccg
      241 cggagcgatc cgcgcgcttc gctgtcccgg cgacgggcgg caaacccggc aaggtcggcg
      301 gcggtcattg ccttatcgaa ggtttccgca aaagcgccgc tgtcgactgc ataaccaagt
      361 gcgttggtca ttggcgtgtg cgccatgtta cgccggcgca gcgtcgcgcg atcgaaacca
      421 cattgtcggg ccgcggcgtc gatcaggcgc tcgatcacgt tgatggcttc ggcgaatccg
      481 ggacctctgg tgacgccgat cggggtcgtg ttggtcagaa cggtacgaat acgcaagccg
      541 acctggggga tgttgtagat accaccttgc agatgcggat actggaaggt ttgcagtccc
      601 ccggcaccgc cgcacatata ggcgccaatg ttggcaatgc tgtcgacacg cagcccgaga
      661 aatcgtccgt cggcatccag ggccagttcc gcgttcgcaa gatgatcgcg ggcctggtga
      721 tcgctgatga aaacctcggt gcggctggcg atccatttta ccgggcggcc acaacgtttg
      781 gcagcccagg gaatgagggc ttgctcggga taggggaagt ttttggctcc aaagccgccg
      841 ccgacgtcgg gcgccacaaa acgcagtcgt tctgacggca cgttcaatac ccgcgcgatg
      901 gcgtcgcgat tgccgtgcag gctctggctg gagacgtgcg cgatgaattg ttccgctgcc
      961 gggtcgtaaa cgccaatcac accgcgcggc tccatcggat tggttacgat gcgatggttg
     1021 tgcaggcgta gcgacacgac atgtgcggct tgctcaaacg ccgaggcggc gtcgcccagt
     1081 gaccaatcca tgcaaaggag ggagggcgtt tcggcggctg cctcgggcgt catgaccacg
     1141 ggacgcgcgt cgtatgtcgc ttcgacgagt tcggctgcat cgagcgcctg ggcgtgggtt
     1201 tcggcgacaa ccagggcaat caattggccg acgtaacgga cctcgtcacg cgccaataac
     1261 ggcatcgggg tgaactgaaa ccgctcgccg gtcagggcgt tggcttcgac ggttggcggc
     1321 aggtcgttca ggccatccgc ggcgacgtct gccgcggtca ggacggccaa tacgccaggc
     1381 gcggcacggg cgtgcgtcgt gtcgatcgag gcaatgcccg catgggcatg cggcgaacgc
     1441 acgaacaccg cgtgcgcttt gtcggggaac acgaggtcgt cgaggtacgc gccctgcccg
     1501 atcaggaacc gcgcgtcttc acgccgcctc ggtgagacgc tgagcccgaa gcggtggccg
     1561 tccaccgatc agtggcgggc gagcttcggg aactgcatgc agagcagatc ggcgcctgcc
     1621 ggtcccgcga acatctccag cgcggcgtca tccggtgcca cgaacacgca ggagttcacc
     1681 ggcaacagag cgccgccagg cacatgggcg
//
LOCUS       DATAVD010000487        10073 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_975887, whole genome shotgun sequence.
ACCESSION   DATAVD010000487 DATAVD010000000
VERSION     DATAVD010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10073
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_975887"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="VHX39_08980"
     CDS             <1..572
                     /locus_tag="VHX39_08980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991290.1"
                     /translation="KASTLAASWPELSSERHRDVIATLITRVGVRRESVEFQVAPARL
                     RILADPISADGPPTDPPPERDEPTIVLSTAANLRRVGRSMRLIVPASNDGATRPNASL
                     IKLMGQAHRLREALIRGDHGSVNELTTHVGLNRVYATRVIRLAWLAPEIVENILRGQQ
                     PRTLTAEKLLRATRIPLDRPGQQRAFGFT"
     gene            complement(857..931)
                     /locus_tag="VHX39_08985"
     tRNA            complement(857..931)
                     /locus_tag="VHX39_08985"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(897..899),aa:Gln,seq:ttg)
     gene            complement(1008..1877)
                     /locus_tag="VHX39_08990"
     CDS             complement(1008..1877)
                     /locus_tag="VHX39_08990"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEX3991291.1"
                     /translation="MATLAAESDAESAPAKVNLYLHVTGKRPDGYHLLDSLVVFAGIA
                     DRITFAPAEALSLTMTGPFASSLAAEPDNLVLRAARALGAEAGVRAAGALRLDKRIPV
                     ASGIGGGSADAAATLRLLCRVWRLSLSRPVLDRIAVGLGADVPVCLHNRPMRMCGVGE
                     ILSPAPALPRCGIVLVNPGTPLATVSVFRARAGDFSQAAVLRGGWDTVEDLAAGLSGM
                     ANDLEAAASGLAPVVGDVLHAIGDTRGCLLARMSGSGATCFGLFADAAGAEAAAAELV
                     RPGWWTWGGSLAG"
     gene            complement(1884..3569)
                     /locus_tag="VHX39_08995"
     CDS             complement(1884..3569)
                     /locus_tag="VHX39_08995"
                     /inference="COORDINATES: protein motif:HMM:NF024821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3991292.1"
                     /translation="MRLSRDARRAVLLILCLMSACAAADPTVSPDRTSSGYGEAGDYL
                     AGRFELSQGEFGPAARDLLKASADNPNDQDLLLQAFIACVNAGRPETVQLALRLPNNQ
                     VAAMVLADAAAKAGDWQQAVTRLRAMPREGVMQLLEPLLLAWAIQGTGDTDQALATLR
                     PFMDNPRYRPIVALHAGMIADIAKRPAEAAAYYQQAELGMGDQSPRTALILASWHARS
                     GQLAEAEGILGRMADSVPEASIALPGMIASLNRRPVANPLDGMAEAYATFAAALRSQQ
                     TGEFAIIMSRLALDVRPDSATARLLAADIQANAKHYDIALELLDKAAQINDPIAPLIR
                     LRHAAVLQEMGQTDEAIREVERIGRDYPDSSLPDQELGDLLRQKQQFAQAVDAYDRVI
                     ARIRQPAPSDWVIYYSRGIAYERTGQWTRAEADFNRALELSPDQPSVLNYLGYALADM
                     GRNLDQAREMIQKAAARRPNDGAITDSLGWVLFRQGNVTEATKILERAVGLEPEDPTI
                     TEHLGDAYWASGRKIEAQYQWRRALTLNPSPEDAAKLEAKIKAHPYGTVASGK"
     gene            complement(3681..4565)
                     /gene="rfbD"
                     /locus_tag="VHX39_09000"
     CDS             complement(3681..4565)
                     /gene="rfbD"
                     /locus_tag="VHX39_09000"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HEX3991293.1"
                     /translation="MTGPILVTGGTGQLAASLATLGLERVKRVGRPAFDFDRPETIEA
                     TFEAARPSLVVNAAAYTAVDKAETDSVAAYRANRDGPQALAQLCAAAGIPLIHISTDY
                     VFDGEKPSPYVETDAIGPRSVYGASKLAGEMAVLATGARTIILRTAWVYAATGQNFVR
                     TMLTLAQTRDSLRVVADQHGCPTAAADLAAAILAIARRIEVDGWDDARSGVFHAAGSG
                     ETTWHGLAIAVFQAASRHGVKTPASVAAVTTAVYPTPARRPGNSRLDCTRLANAFGIR
                     LPDWHVSLARTVDEIFTD"
     gene            complement(4600..5160)
                     /gene="rfbC"
                     /locus_tag="VHX39_09005"
     CDS             complement(4600..5160)
                     /gene="rfbC"
                     /locus_tag="VHX39_09005"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEX3991294.1"
                     /translation="MIVEPLPIPDVLLLTPRRFQDPRGFFSETWNQTRFAEIGIPGPF
                     VQDNHATSNAKGVLRGLHCQIGENAQGKLVRVTKGAIWDVVVDIRHGSPTYGHHAGAV
                     LSGENWSQLWVPAGFLHGYCTLTDDTEVIYKVTAPWDKDNERGVIWNDPDLAVAWPIT
                     KTAAILSDKDQVLPRLKDCEPWFGNP"
     gene            complement(5157..6032)
                     /gene="rfbA"
                     /locus_tag="VHX39_09010"
     CDS             complement(5157..6032)
                     /gene="rfbA"
                     /locus_tag="VHX39_09010"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003616683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEX3991295.1"
                     /translation="MRGILLAGGSGTRLHPMTLAASKQLLPVYDKPMVYYPLSTLMLA
                     GIRDIMIISTPEDLPQFRRLLGDGSRFGVQFAYAVQPKPDGIAQAFLIASDWIDGASC
                     ALALGDNIIHADHLSQLLQHAATADTGATVFAYQVRDPERYGVVSFDTSGRAIELVEK
                     PSIAASNWAVTGLYFYDSQVTEIARSIRPSPRGELEITDLNKVYLNAGTLRVDRLSRG
                     CAWLDAGTPDSLLQAATFVQTIQSRTGNLVGCPEEVAFRMGYISAESLRTQAGRLGKT
                     DLGRALMELAEGEQD"
     gene            complement(6029..7084)
                     /gene="rfbB"
                     /locus_tag="VHX39_09015"
     CDS             complement(6029..7084)
                     /gene="rfbB"
                     /locus_tag="VHX39_09015"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010502909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEX3991296.1"
                     /translation="MKILLTGGCGFIGSAVIRHLIRHTGHVVVNVDKMTYAASEEALE
                     EARHHQRHILVRADIADAAAMRHAFEIHDPDVVMHLAAESHVDRSIDGPADFVRTNVV
                     GTFTLLEAARRHYAGLDAARKSAFRFHHISTDEVFGALDQGDAPFTETTPYDPRSPYS
                     ATKAGSDHLVRAWHHTYGLPTMVSNTCNNYGPWQFPEKLIPLVTLNALSGVTLPVYGD
                     GSNIRDWIFVDDHAAALVRVIEAGQPGATYAIGGRQPRSNLEVVKAICAHLDRCVPDP
                     AGARERLIRFVTDRPGHDFRYEIDPTRTEATLGWKAPHDFETGIARTIDWYLENRSWW
                     EGVRAARYAGQRLGTAA"
     gene            7277..8446
                     /locus_tag="VHX39_09020"
     CDS             7277..8446
                     /locus_tag="VHX39_09020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HEX3991297.1"
                     /translation="MSNQMRGLNFDLGEAAEMLRDTVESFAADEIAPRAAAIDTDNEF
                     PADLWPKLGSIGLLGVTVTEEYGGAGMGYLEHVVAMEEVSRASAAVGLSYGAHSNLCV
                     NQIFRNGDEDQKRRYLPKLISGEHVGALAMSEPGAGSDVVSMRLRADQRGDRYVLNGT
                     KMWITNGPNADVLVVYAKTDPDAGPRGITAFLVERGFLGFSTSPKLDKLGMRGSNTCE
                     LVFQDCEVPEENVLGSVGRGVNVLMSGLDYERAVLAAGPLGIMRACMDAVLPYVHERR
                     QFGQAIGEFQLMQGKLADMYTTMNATRAYVYAVAKACDRGQTSRKDAAGAILYAAEKA
                     TWMALEAIQALGGNGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFAETA"
     gene            8449..10056
                     /locus_tag="VHX39_09025"
     CDS             8449..10056
                     /locus_tag="VHX39_09025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX3991298.1"
                     /translation="MPIIESLIDRRAPGFQANTEAMEGIVADLRSLAETVCLGGGKAS
                     RDRHVSRGKLLPRDRVQALLDPGSPFLEIGQLAAHGMYGDEVPSAGIITGIGRVSGRE
                     CMIVVNDATVKGGTYYPLTVKKHLRAQEIAAQNRLPCIYLVDSGGANLPNQDEVFPDR
                     DHFGRIFFNQANMSAAGIAQVAVVMGSCTAGGAYVPAMSDEAVIVRGQGTIFLAGPPL
                     VKAATGEIVSAEDLGGADVHCRVSGVADHYAENDAHALGIARGIVSHLNTVKPASLAM
                     REPVPPRYDAREMYGIVQADRRRPFEVREIIARIVDGSEFDEFKRLYGATLVTGFARI
                     WGMPVGIVANNGVLFSESAQKGAHFIELCAQRGIPLVFLQNITGFMVGRKYEVGGIAK
                     DGAKMVTAVATAAVPKFTVIIGGSFGAGNYGMCGRAYAPRFLWMWPNARISVMGGEQA
                     ASVLATVRRDNMEARGQNWPVADEEAFKEPIREQYEVQGHPYYATARLWDDGIIDPVD
                     TRRVLGLSLSASLNAPIEPTRFGLFRM"
BASE COUNT         1876 a         3123 c         3250 g         1824 t
ORIGIN      
        1 ccaaagcctc gacgctcgcc gcttcctggc cagagctctc gtcggaacgg catcgtgatg
       61 tcatcgcgac gctgatcacc cgcgtcggtg tgaggcggga aagcgttgaa tttcaggtcg
      121 caccagcgag gctaaggatt ctggcggacc caatctcagc cgacggtcca ccaacggatc
      181 caccgccgga acgggatgag ccaacaatcg tcctgtccac cgcggcgaac ctccggcgcg
      241 ttggcaggag catgcgactg atcgtcccgg ccagcaacga tggtgccaca cgacccaacg
      301 catctttgat caagctgatg gggcaggccc atcgtttgcg ggaagccttg atccgcggcg
      361 atcacggcag cgtcaacgag ctcaccacgc acgtaggcct gaaccgtgtt tacgcgaccc
      421 gcgttatccg actggcctgg ctggcgccgg agatcgtgga aaacatcctg cgcggacagc
      481 agccacgcac gctgacagca gagaaactgc ttcgcgccac acggattccg ctcgacaggc
      541 cgggccagca gagggctttc ggcttcacct gaccgactga cacggaccca ccaaaggctg
      601 tggcgaggcg ggcccataat gcccgccttt tttcgttcct ggaccagcgt cgctgaggct
      661 cgtctttcac caggcacctg acggtaaccg gaacaaaggc cgtcagagat aacgggctga
      721 catcggaggc ccggcgtcgc ggaattcgtc gctgcacccc attagcgaaa gcggcgcgcg
      781 gaaaacccca cgtgttcagg gcgctttcga cacagcccgc gttccgaaaa atgatggaaa
      841 ataaatggct taacgctggc tggggcggga ggactcgaac ctccgaatga cggaatcaaa
      901 atccgttgcc ttaccacttg gcgacgcccc aaccggcccc tcacgcggga tatctggtga
      961 taggtcggga cgtgtcgcgc gtaaagcggg aacgccaggc ggcggaatta ccctgccagc
     1021 gatccacccc aggtccacca acctgggcgg acgagttctg ccgcggcggc ctccgcgccg
     1081 gcggcgtcgg caaataagcc gaagcaggtc gcgcccgagc cgctcatgcg cgccagcagg
     1141 caaccgcgtg tgtcgccaat cgcatgcagc acatcgccaa caaccggggc gagaccgcta
     1201 gcagccgcct ccaaatcgtt cgccatcccg gacaggccag ccgccagatc ctcgacggtg
     1261 tcccaaccgc cacgcaacac cgccgcttga gaaaagtccc ccgctcgcgc gcgaaacact
     1321 gacacagttg ccagcggtgt gcccgggttg accaaaacga tcccgcaacg cggcaacgcc
     1381 ggggccgggg acaaaatctc acctacgccg cacatgcgca tgggccgatt gtgtagacac
     1441 acaggcacat ccgcacccag gccgaccgcg atgcgatcca gtactggcct ggacaggctt
     1501 agtcgccaga cccggcaaag caggcgcagt gtcgccgcgg catcggcgga gccgccacca
     1561 atcccggacg caaccgggat tcgcttgtcc aggcgaagag cacccgctgc tcgcacgccg
     1621 gcctcggcgc ccagagcgcg cgccgcacgt agcacgagat tatccggctc ggccgcgagc
     1681 gatgacgcaa atggaccggt catcgtgagc gacagcgcct cggcgggtgc gaatgtgatc
     1741 cggtctgcga tgccggcaaa aaccaccagg ctgtccagca agtggtagcc gtccggccgc
     1801 ttgccggtca catgcaggta aaggttaact ttcgccggcg ctgactcggc gtccgattcc
     1861 gcggccagtg tcgccaatgc aggctacttc ccgctcgcca cggtgccgta cggatgggcc
     1921 ttgatcttgg cctcaagctt cgccgcgtct tcgggcgagg gattaagggt cagggcgcgc
     1981 cgccactgat actgtgcctc gatcttgcgg cccgaagccc agtacgcgtc gcccagatgt
     2041 tccgtgatcg tgggatcttc cggttccagc cccaccgcgc gttccaaaat cttggttgcc
     2101 tcggtcacat tgccctggcg aaacaggacc cagccaagac tgtcggtaat ggcgccatca
     2161 ttcggccggc gagcggcggc cttctggatc atctcgcggg cctgatccag gttgcgtccc
     2221 atatccgcca acgcataacc caaataattc aggacagaag gctgatcggg cgacagttcc
     2281 agagcacggt tgaaatcggc ttccgcccga gtccactggc cggtgcgctc gtaggcgatc
     2341 ccgcggctgt aatagatcac ccagtcgctc ggcgccggct gccggatgcg ggcaatcacc
     2401 cggtcatatg catcgactgc ctgtgcgaac tgctgtttct gccgcaacag atcgcccagt
     2461 tcctggtcgg gtagggaact gtcggggtag tcgcggccga tgcgttccac ctcgcggatc
     2521 gcctcatccg tctgccccat ctcctgcagc acggcagcgt gtcgtagccg aatgagcggc
     2581 gcgatcggat cgttgatctg cgccgccttg tccaacaact ccaacgcgat gtcgtaatgc
     2641 ttcgcgttgg cctgaatatc cgcggccagc agccgcgcgg tcgccgagtc cggcctgacg
     2701 tccagcgcga gccggctcat gatgatggcg aactctccgg tctgctggga gcgcaacgcg
     2761 gctgcgaatg tcgcgtaagc ctcggccatc ccgtcgagcg gattggcgac gggccggcgg
     2821 ttcaggctcg cgatcattcc gggcagcgca atcgacgcct ccggcacgct gtccgccatg
     2881 cgtccgagaa tgccttccgc ctcggccaat tgccccgatc gcgcatgcca actggccagg
     2941 atgagggcgg tgcgcgggct ctggtcgccc atgccgagtt cggcctgctg gtaatacgcc
     3001 gcggcctccg ctggccgttt ggcgatatcg gcgatcattc cggcgtgcaa cgcgacaata
     3061 ggtcgataac gcgggttgtc catgaaaggc cgcagcgtgg ccagggcctg atcggtgtcg
     3121 cccgtacctt ggatggccca tgccagcagg aggggctcca gcagttgcat caccccttcc
     3181 ctgggcatgg cgcgaagtcg agtgaccgcc tgctgccagt cgcccgcctt tgcggcagca
     3241 tcggcaagca ccattgcggc gacctgattg ttgggcaaac gcagcgcgag ctgcaccgtc
     3301 tccggccggc cggcgttaac gcaagcgatg aaggcttgca gcaacaggtc ctggtcgttc
     3361 gggttgtccg ccgacgcttt gagcagatcc ctggccgccg gaccaaactc gccttggctc
     3421 agttcgaagc gcccggcaag gtagtctccc gcttcgccgt agcccgaaga cgtacggtcc
     3481 gggctgaccg tcggatcggc ggccgcgcag gcagacatca gacaaagaat gaggagaacc
     3541 gcgcgacgcg catcccggga caaacgcatg gcggcaatct atcatcgcca ggttacgtct
     3601 gtcatgcggt atgacctgct attattgcag cgcggggtga cgattgagtc accatcaggc
     3661 cgcgctgcgg ccgttggcga tcagtctgtg aaaatctcgt cgacggtgcg ggccagacta
     3721 acgtgccagt ccggcaatcg aatgccgaat gcattcgcca gccgcgtgca gtccagccgc
     3781 gaatttccgg gccgacgcgc cggagtcgga tatacggcgg ttgttactgc ggcaaccgac
     3841 gccggtgttt tcacgccgtg gcgggacgct gcctggaaca cagcaatggc gaggccatgc
     3901 cacgtcgttt cgccactccc tgcggcatgg aagacgcccg atcgagcatc atcccaaccg
     3961 tccacctcga tccggcgcgc aattgccagg atggcagcag ccagatctgc ggccgcggtc
     4021 gggcagccgt gctggtccgc gaccacgcgc aagctgtcgc gggtttgtgc gagggtcagc
     4081 atggtacgca caaagttctg cccggtcgcg gcgtaaaccc aggccgtccg caggatgatg
     4141 gtccgcgcgc cggtcgccag gacggccatc tctccggcca atttgctggc gccatagacg
     4201 ctgcggggcc cgattgcatc ggtctcgaca tagggggacg gcttctctcc gtcgaatacg
     4261 tagtcggtcg agatatggat caaggggatg ccggcggcag cacaaagctg cgccagtgcc
     4321 tgcgggccgt cacgattggc acggtacgcc gccaccgaat cggtctccgc cttgtcgacc
     4381 gctgtataag ccgcggcatt gaccaccaaa ctgggcctgg cagcctcgaa tgtcgcctcg
     4441 atcgtttcgg gtcggtcgaa atcgaatgcg ggccggccca cacgcttcac gcgctccaag
     4501 cccagagttg cgagggaggc ggcgagttgt ccggtgcctc cggtgaccag gattggcccg
     4561 gtcatcgtcc ggttgtcgcg tcggctgtcg ggaaatcggt cacgggttcc cgaaccatgg
     4621 ctcgcaatcc ttgagccgcg gcaggacctg gtccttgtcg gagaggattg ccgccgtctt
     4681 ggtgattggc caggccaccg ccagatcagg atcattccag atgacgccgc gctcgttatc
     4741 tttgtcccag ggggcggtga ctttgtagat cacctcggtg tcgtcggtca gcgtgcaata
     4801 cccgtgcagg aaaccggccg gcacccaaag ctgggaccag ttctctccgc tcagtacggc
     4861 tccggcgtgg tgaccgtagg tgggcgagcc atgcctgata tcgaccacga catcccagat
     4921 cgctcccttg gtgacgcgca ccagtttacc ttgcgcgttt tcgccgatct ggcagtgcaa
     4981 tccgcgcagc acgcccttgg cgttcgacgt ggcgtgattg tcctggacaa acggtccggg
     5041 gatgccgatt tcggcgaacc gggtctgatt ccaggtttcg gaaaagaatc cgcgtggatc
     5101 ctggaagcgt cgcggcgtca gcagaagcac atcaggaatt ggcagaggtt cgacgatcaa
     5161 tcctgctctc cttccgccag ctccatcagc gctctgccaa gatcggtttt gccaaggcga
     5221 cccgcttgag tgcgcaacga ctcggccgag atgtagccca tccgaaatgc gacctcctcc
     5281 gggcaaccga ccagattgcc ggtgcgggac tggatggttt gtacgaaagt ggctgcctgc
     5341 agcagactgt cgggggtgcc ggcgtcgagc cacgcgcagc cacgcgacag ccggtctacg
     5401 cgcaaggtgc cggcattgag atagactttg ttgaggtcgg tgatctccag ttcgccccgc
     5461 ggagagggcc ggatcgaccg cgcgatttcc gtcacctgac tatcgtagaa atacaggccg
     5521 gtgacagccc agttggaggc ggcgatcgag ggcttttcga caagctcgat ggcgcggccc
     5581 gaggtgtcga agctgaccac gccataacgc tcgggatcgc gtacctggta ggcgaacacc
     5641 gtggctccgg tatcggctgt ggccgcatgt tgcagcagct gcgacagatg gtcggcgtga
     5701 atgatgttgt caccaagcgc cagcgcgcag gaggctccgt cgatccaatc gctggcgatg
     5761 agaaaagcct gcgcgatccc atcgggcttc ggctgcacgg cgtaagcgaa ctgcacgccg
     5821 aaacggctgc cgtcacccag gaggcgccgg aactgcggca ggtcctcggg cgtcgagatg
     5881 atcattatgt cgcgaatacc cgccaacatc agggtcgaca gcgggtagta gaccattggc
     5941 ttgtcataga ccggcagcaa ttgcttggaa gctgccagag tcattggatg cagccgcgtg
     6001 ccggagccgc cggcgagcag aatgcccctc atgctgctgt ccccaatcgt tgaccggcat
     6061 agcgggcggc tcgcacgcct tcccaccaac tccggttctc cagataccaa tcgatggtgc
     6121 gggcaatgcc ggtttcgaag tcatgcggcg ccttccagcc aagtgtcgcc tcggtccggg
     6181 tgggatcgat ttcgtagcgg aaatcgtgac cgggccggtc ggtgacgaag cggatcagcc
     6241 gttcgcgagc gccggcggga tccggcacac agcgatcgag atgggcacag atcgccttga
     6301 ccacctcgag gttggatcgc ggttggcggc cgccgatcgc atatgtggcg ccgggttggc
     6361 cagcttcgat cacccgcacc agggcggcgg cgtggtcatc gacgaagatc cagtcgcgga
     6421 tattggagcc gtcgccgtac accggcagcg ttaccccgga caacgcattt aatgtcacca
     6481 ggggaataag cttctccggg aattgccagg gcccgtaatt gttgcaggtg ttcgagacca
     6541 tggtgggcag accgtaggtg tggtgccagg ctcggaccag gtggtcggac cccgccttgg
     6601 tcgccgaata gggactgcgc ggatcgtacg gcgtggtctc ggtaaatggt gcatcgccct
     6661 ggtccagcgc gccgaacacc tcgtcggtgg agatgtggtg gaagcgaaac gcggatttcc
     6721 gggccgcgtc gaggccggcg taatgccggc gcgcggcctc cagcagcgtg aaggtgccga
     6781 ccacattggt acggacgaaa tcagccgggc cgtcgatcga gcggtcgacg tggctctcgg
     6841 cggccagatg catgaccacg tcgggatcgt ggatctcgaa cgcgtggcgc atggcggcgg
     6901 catctgcgat gtcggcgcgg accaggatgt ggcgctggtg atgccgcgct tcctccagcg
     6961 cttcttccga ggcggcataa gtcatcttgt cgacgttgac cacgacgtga ccggtgtgcc
     7021 gaatcagatg gcggatcacc gccgagccga taaaaccaca gccaccggtc aacaaaattt
     7081 tcatttccgt tgcatctcct ggatcctgcg gtccggtgcg cgtgggctta gcattatgga
     7141 acgggaaacc tcaacaaaac cctacagatg agacgggtgg catcctcggt cggtgcggcc
     7201 ggcgcggtcc cgatggacag gcgtcgcatt ccgatgcgta ttggtgcggg atgtcggaac
     7261 agaggacacc gatcgcatga gcaaccagat gcgcggcctg aactttgacc tcggcgaggc
     7321 ggccgaaatg ctgcgggaca cggtcgaatc ctttgccgct gacgaaattg caccgcgcgc
     7381 cgccgcgatc gacaccgaca atgagttccc ggccgatctg tggccgaagc ttggttccat
     7441 cgggcttctg ggcgtcaccg tcacagaaga atacggcggc gccgggatgg gctatctgga
     7501 acacgtggtg gcgatggagg aagtcagccg ggcctcggcc gccgtcggcc tgtcatacgg
     7561 cgcacattcc aacctgtgtg tgaaccagat ttttcgtaat ggcgacgagg atcagaagcg
     7621 ccgctatctg ccgaaactga tctccggcga gcatgtcggc gcactggcga tgtccgagcc
     7681 tggcgccggg tcggatgtcg tatccatgcg gctgcgagca gaccagcgcg gtgaccgtta
     7741 tgtgctgaac ggcaccaaga tgtggatcac caatggaccc aatgccgacg ttctggtggt
     7801 atacgccaag accgacccgg atgccggacc gcgcggcatc accgcttttc tggtggagcg
     7861 gggcttcctc ggattctcca catcgccaaa actcgacaaa ctgggcatgc gtggctcgaa
     7921 cacctgcgag ttggtatttc aggactgcga ggttcccgaa gaaaacgtgc ttggctcggt
     7981 gggccgtggc gtcaacgtcc tgatgagcgg tctggattat gaacgcgccg tccttgccgc
     8041 tgggcctttg ggcatcatgc gcgcctgtat ggatgccgtg ctgccttatg tgcatgaacg
     8101 gcggcaattc ggccaggcga tcggcgaatt ccaactcatg caaggcaagc tcgcggacat
     8161 gtacacgacg atgaacgcaa cccgggctta tgtttacgcc gtggccaagg catgcgatcg
     8221 cggccagacg tctcgaaaag atgccgccgg ggcaatcctg tatgccgccg agaaagcgac
     8281 ctggatggct ctggaagcga tccaggctct cggcggtaac ggttacatca acgattaccc
     8341 caccggccgg ctgttgcgcg atgccaagct ttatgaaatc ggcgccggaa cgagtgaaat
     8401 ccgccgcatg ttaatcggcc gcgaattgtt tgccgagaca gcctgaccat gccgatcatc
     8461 gaaagcctca tcgaccggcg cgcccccggt ttccaggcaa acaccgaggc gatggaggga
     8521 attgtcgccg atctgcgttc tcttgccgag accgtttgtc tgggcggtgg caaagcgtcg
     8581 cgcgatcgtc atgtgtcgcg cgggaaattg ttgccgcggg atcgggtgca ggcgctgctc
     8641 gatccgggct cgccgttcct ggagatcgga caactcgccg cgcacggcat gtacggcgat
     8701 gaggtgccgt cggccgggat catcaccggc attggccgcg tgtccggccg agagtgcatg
     8761 atcgtggtca acgatgccac ggtgaaaggc ggcacttact atccgttgac cgtcaagaag
     8821 cacctgcgcg cacaggaaat cgcggcgcag aatcggctgc cgtgcattta tctggttgat
     8881 tccggcggtg ccaacctgcc caaccaggac gaggtgtttc cggatcgcga tcatttcggc
     8941 cgcattttct tcaatcaggc caatatgtcg gcggcgggaa tagctcaggt cgccgtcgtg
     9001 atggggtctt gcacggccgg tggtgcctat gtgccggcga tgtccgacga agcggtgatc
     9061 gtgcgcggcc agggcacgat ctttctcgcc ggccctccgc tggtcaaagc tgccaccggc
     9121 gagatcgttt cggcagaaga tctgggtggt gccgacgtgc attgccgcgt gtccggcgtc
     9181 gccgatcatt atgccgagaa cgatgcgcat gcgttgggga tcgcgcgcgg gatcgtgtcg
     9241 catctgaaca ctgtgaaacc tgcgtcgctg gcaatgcgcg aaccggtacc gccgcgatac
     9301 gatgcgcgtg agatgtatgg cattgtccag gcggatcggc gccgcccgtt cgaggtccgg
     9361 gaaatcattg ctcgcatcgt cgatggcagc gaattcgacg aattcaaacg gctgtatggt
     9421 gccacgttgg tcaccggctt tgcgcgcatc tggggaatgc cggtcgggat cgttgccaat
     9481 aatggcgttc tgttcagcga gagcgcacaa aaaggtgcac atttcatcga gctttgtgca
     9541 cagcgcggca ttccgctggt gtttttgcaa aatatcaccg ggttcatggt cggccggaag
     9601 tacgaggttg gcggcatcgc caaggacggt gcgaaaatgg tgactgcggt ggccaccgcc
     9661 gcagtgccga aattcaccgt catcattggc ggatcgtttg gcgcaggaaa ctacggcatg
     9721 tgcgggcgag cctatgcccc gcgcttcctt tggatgtggc cgaacgccag gatcagcgtc
     9781 atgggtggcg agcaggcggc aagtgtgttg gccacggtgc gccgcgacaa catggaggct
     9841 cgcggccaga actggccggt ggcggacgag gaagccttca aggaaccgat tcgggaacaa
     9901 tacgaagtgc aggggcatcc gtattacgcg accgctcggc tgtgggacga cgggatcatc
     9961 gatccggtgg acacgcgacg cgtactgggc ctgagcctgt cggcgagcct gaatgccccg
    10021 atcgagccga cgcggtttgg cttgttccgg atgtgaaccg gctcgccggt gag
//
LOCUS       DATAVD010000488         6241 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3022608, whole genome shotgun sequence.
ACCESSION   DATAVD010000488 DATAVD010000000
VERSION     DATAVD010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6241
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3022608"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1105)
                     /locus_tag="VHX39_09030"
     CDS             complement(<1..1105)
                     /locus_tag="VHX39_09030"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003623971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HEX3991299.1"
                     /translation="MSNPVDGDATPITSLRQLAEHIAEGCKPRDQFGIGTEHEKFGFR
                     LKDLKTPPYEPSDGQPGSIRDLLQGLEKFGATPIQDNGNTIGLKQGGASVSLEPAGQL
                     ELSGGITTTLHETRAELDEHFDQVRSVARGLDLGFAPLGFHPLARREEMPWMPKGRYA
                     IMRRYMPLVGSMGLDMMTRTCTVQVNLDYQSEQDMARKLRVSLLLQPLATALFANSPF
                     TEGRENGFLSYRAQVWTDTDNQRSGIPAVMLEPDFGFERYVTWLVDSVPMYFVYRDGK
                     YIDVAGASFRDFMNGRLHNLAGVVPTVGDFADHMTTVFTDVRVKRFLEMRGADAGSAD
                     MMVAQSALWVGLLYDESALTAAETLVRGLGWDDA"
     gene            complement(1135..1890)
                     /locus_tag="VHX39_09035"
     CDS             complement(1135..1890)
                     /locus_tag="VHX39_09035"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010667796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEX3991300.1"
                     /translation="MTRSTGIPTARTTAPRLFVDEPLRDGAEIVASAEHVHYLRNVLR
                     REAGDQVRLFNGVDGEWLARIIFGRRSVMFVRELCRVQQPEAGPWLVFALLKRDATDL
                     IVRQAVELGVSRLLPVITERTNAARVNGERLRAIAIEAAEQSERLTLPDIDAPQRLDA
                     VLTNWPVQRLLFVAFERSWSGTPLATSHIGNVALLVGPEGGFTPAERETLRRHDFVTP
                     ISLGPFVLRAETAAAAGLAQLLRMGWAEYVAST"
     gene            1912..2826
                     /gene="ubiA"
                     /locus_tag="VHX39_09040"
     CDS             1912..2826
                     /gene="ubiA"
                     /locus_tag="VHX39_09040"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003620321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HEX3991301.1"
                     /translation="MTAHTDIAATGWVSRLPRAWLPYLLLARLDRPIGIWLLFLPGLW
                     GILLARAAWPETIRLILLFGIGSVVMRAAGCVVNDLWDRDIDRRVARTAERPLASGAI
                     RPVQALVFLAVLLGSGLVVLLSLNRLAQELGVASLLLVGLYPLAKRVTWWPQLMMGFT
                     FGFGAPLGYAAAAGRIDLYWALLYGAAICWDLGFDTIYAHQDREDDALVGVHSTARLF
                     GERTRPFLAACYGATVLLFGLAGWSSGLGLWFIAALALPAGLLAWQVASLNIHDPGRC
                     LKLFRANREVGLAFAFALLVGMAQANLQ"
     gene            2823..3509
                     /locus_tag="VHX39_09045"
     CDS             2823..3509
                     /locus_tag="VHX39_09045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEX3991302.1"
                     /translation="MTRLNSEQFIRANTCQGTAPLVPEIVLYLATEITPIWQATEDWL
                     RERALQPPYWAFAWPGGQALARHMLDNPCLVAGKRVLDFAAGCGIAAIACAQAGASSV
                     EAAEIDDIARAAIRLNAAANRVGVAVAEGDVVGDACRWDIILCGDVCYEVPMTTRILP
                     WLRLIAETAEVWIADPGRAYLPGSGLSPITQYIVPTALELEDRTERRVGLYRLMPVAA
                     DNDARSTPGH"
     gene            3800..5134
                     /locus_tag="VHX39_09050"
     CDS             3800..5134
                     /locus_tag="VHX39_09050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014413489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019825 - oxygen binding [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="globin-coupled sensor protein"
                     /protein_id="HEX3991303.1"
                     /translation="MSIPLNQSERLRAMNVDVETKEIMRELRPLVAAQIDAAITAAYD
                     HCMRFPEFKKTYAGVDMDEAKRAQRQHWLDDVFAATFTDAQLAHTVEMAAGRQRSGLE
                     MRWFFVFWSIVFARLTDAITTAYRKKSDRLPKLLATLGKVVLFDLELFCAVYIDAAAG
                     AASGQLNQRADAFERELGDLVKTVADSVTKVQGSARTMSSAAEQTAGQARTALQAGAQ
                     AGSHAQEVTGATEGLTSSVQEIGRQVARSTEIAGTAVDEAQRTNALVLGLAEAGSRIG
                     DVVQLIKSIASQTNLLALNATIEAARAGEAGRGFAVVAGEVKSLANQTAKATDEIAAQ
                     ISAVQRATQDAVAGIQGIGTTIGQISEIAGAMTAAVDHQRTATQEIAQRVQEVARSSG
                     VASSSMEAVNDSATRTGSAAQTVASGMDELTRQSEQLRSQVGQFLGRLRSSG"
     gene            complement(5169..>6241)
                     /locus_tag="VHX39_09055"
     CDS             complement(5169..>6241)
                     /locus_tag="VHX39_09055"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3991304.1"
                     /translation="QIEQGRRADTLILERLPDALVVLRQDRTVIRRNAAADAIFGADL
                     PSVLRHPDLRAALDLAIGDGETRAVEISIGGPIERELRATVVPMNPPLQDGGRAVVVL
                     SDRTTEHSTQRSHTDFVANVSHELRTPLASLIGFTETLLGPAENDPPARKRFLTIMAE
                     QGARMNRLIDDLLSLSRIEMVEHQAPSDTVDLAALLPRIVAGYEPRLAGGGTRIEVEI
                     APDTPPVIGDADQIAQVTQNLLDNAVKYGKEGGTVRLTSGPAASGKGWPARPGAVLAV
                     SDEGPGIPRADLPRVTERFYRVDKGRSRAAGGTGLGLAIVKHITSRHRGQLSIESEEG
                     KGTTVSVWLPVGQPGARGRDGA"
BASE COUNT         1094 a         1939 c         2057 g         1151 t
ORIGIN      
        1 ctgcatcgtc ccagcccaga ccgcggacca gtgtttccgc agccgtcagt gctgactcat
       61 cgtatagcag cccaacccaa agggccgatt gcgccaccat catatccgcc gaaccggcat
      121 ccgcgccgcg catctccaga aaccgcttca cgcgaacatc ggtgaacacg gtggtcatgt
      181 ggtcggcgaa atcgccgacc gtcggtacca ctccggccag gttgtgcaat cgtccgttca
      241 tgaagtcgcg gaacgaggcg ccggcaacgt cgatgtactt gccgtcgcga tagacgaaat
      301 acatcggcac ggaatcaacc agccacgtga cgtaacgctc gaagccgaag tccggttcca
      361 gcataaccgc aggaatgccc gagcgctgat tgtcggtgtc ggtccagacc tgcgcgcggt
      421 acgacaggaa accgttctcg cggccttcag tgaacggtga attggcgaac agcgccgtcg
      481 ccagcggctg caacagcagc gacacccgca gttttcgggc catgtcctgt tcgctttggt
      541 aatcgaggtt cacctgcacg gtgcaggtgc gggtcatcat gtccaatccc attgacccga
      601 ccaatggcat atagcggcgc atgatcgcgt agcggccctt gggcatccat ggcatttcct
      661 cacgccgcgc cagcggatga aacccaagtg gggcgaaacc caggtccagg ccgcgcgcga
      721 cgctgcgcac ctgatcgaaa tgttcgtcaa gctcggcacg ggtttcgtgc agcgtggtcg
      781 taatgcctcc ggataactcc agttggccgg ccggttccag cgacaccgag gcgccacctt
      841 gcttcaggcc gatcgtattg ccgttatcct ggatcggggt cgcgccaaat ttctccagcc
      901 cttgcagcaa atcgcggata ctgccgggtt ggccatccga gggttcgtaa ggcggcgttt
      961 tcaggtcttt caggcggaag ccaaacttct cgtgttcggt gccaataccg aattggtccc
     1021 tgggtttaca cccttcggcg atgtgctcgg cgagctggcg gagcgacgtg atcggggtcg
     1081 cgtcgccgtc tactggattg gacatgcggt gctcggactt tccggcgggg cgtttcaggt
     1141 tgacgcaacg tactcggccc accccatgcg gagcaactgg gccagacccg cagcggcggc
     1201 ggtctcggcc cgaagcacga aggggccgag tgaaatcggt gtgacaaagt cgtgccggcg
     1261 caacgtctcg cgctcggccg gagtgaaacc gccttccggt ccgaccagca atgccacgtt
     1321 gccgatgtgg gacgttgcca gcggcgtgcc agaccaggac cgctcgaatg cgacgaaaag
     1381 caggcgttga acgggccagt tggtcaggac ggcgtcgaga cgctgcgggg cgtcgatgtc
     1441 aggtagggtc aggcgttcac tctgttcggc ggcttcgatg gcaatggcgc gaagccgttc
     1501 gccgttgact ctggcggcat tggtgcgttc ggtgatgacg ggcaacaggc gggaaacgcc
     1561 cagttcgacg gcctggcgga caatgaggtc ggtcgcatcg cgcttcaata gcgcaaatac
     1621 caaccaaggg ccggcttccg gttgctggac gcggcacaac tctctcacga acatcacgct
     1681 tctacggccg aaaataatgc gcgccaacca ctctccatcg acgccattga acaggcggac
     1741 ctggtcaccg gcctcgcggc gaaggacatt gcggaggtaa tggacgtgct cggccgaggc
     1801 gacgatttcg gcgccgtcgc gcaacggctc gtcgacaaac agccgaggcg cggtcgtgcg
     1861 agcggtcggg ataccggttg acctggtcat ggcgaggggc agagtaacac catgaccgcg
     1921 cacacggata tcgccgccac tggttgggtt tcccggctgc cgcgagcctg gttaccctat
     1981 ttgctgctgg cacggctgga tcggccgatc ggcatctggc ttttgttcct gcctggattg
     2041 tgggggatct tgctggctcg ggcggcatgg ccggaaacca tccggcttat tttgctgttc
     2101 ggaatcggca gcgtggtcat gcgcgccgcc ggttgcgtgg tgaacgatct gtgggatcgc
     2161 gacatcgatc gtcgcgtcgc gcgcacagcg gaacggccgc tggcgtccgg cgcgatccgg
     2221 ccggtgcagg cgctggtgtt ccttgcggtg cttctgggat ccgggctggt ggtcctgctg
     2281 agcttgaatc gcctggccca ggaactgggc gtggcgtcgt tgctgctggt cgggctgtat
     2341 ccgttggcga agcgggtcac ctggtggccg caactgatga tgggtttcac ttttggattt
     2401 ggtgccccat tgggctacgc cgcggccgcc gggcggatcg atctgtactg ggctctgctg
     2461 tacggcgccg caatttgctg ggatctcggc ttcgatacga tctatgcgca tcaggatcgc
     2521 gaggatgacg cactggttgg cgtacattcg accgctcgct tgttcggcga gcgaacccgg
     2581 ccattcctgg ccgcctgcta tggcgcaact gtcttgttgt ttgggctggc gggctggtcg
     2641 tccgggctcg gtctttggtt catcgcggcg ctcgcattgc cggctggatt gctggcctgg
     2701 caggttgctt cgctgaatat ccacgacccg ggacgctgcc tgaaactgtt ccgcgccaac
     2761 cgtgaagtgg ggctggcgtt cgcgtttgct ctgctggtcg gcatggcgca ggccaatttg
     2821 cagtgacacg tctgaattct gaacagttca ttcgcgccaa tacctgtcag ggcacggcgc
     2881 ctctggtgcc ggagatcgtc ctctatctgg cgaccgagat taccccgatc tggcaggcga
     2941 ccgaggactg gctgcgggaa cgcgccctgc aaccgccgta ctgggctttc gcgtggccgg
     3001 gcgggcaggc gctggcgcgg cacatgctgg ataacccgtg cctcgttgcc ggcaaacggg
     3061 tgctggattt cgccgcagga tgtgggattg ccgcgatcgc ttgtgcgcag gcgggagcct
     3121 catcggttga ggccgcggag atcgacgata ttgcccgcgc ggcgatccgg ctgaatgctg
     3181 ctgccaaccg tgttggcgtg gccgtggccg agggcgatgt ggtcggcgac gcctgccgtt
     3241 gggacatcat cttgtgtggt gacgtatgtt atgaagtgcc gatgaccacc cgcatcttgc
     3301 cctggctgcg gttgatcgcc gaaaccgccg aggtctggat tgccgatcct gggcgggcgt
     3361 atctgcccgg ttccggcctt tcgccgatca cgcaatacat tgtgccgacc gcgctggaac
     3421 ttgaggatcg gaccgagcgg cgggttggat tataccgcct gatgccagtg gcggcagata
     3481 acgacgcacg atctacgccc ggccattgaa gccggcccgt ccggcatacg cttgtgctac
     3541 gcaagctttt tttcatgttt gcggaagccg gagccattct gttcaggcat cattaacccc
     3601 ggggcgctat gcccgcatcg gatctttcaa tggtcgaggt tggatgcaac gcaggcggcg
     3661 cgtgtgtgtg ccgcaagtgt ccctcgccgg gtgatccagg acgcgccccg caaaacgcgt
     3721 tggccggaat cagcaatcgg tgcggcgccc gataacggac cgttcgggcc cggcgggcaa
     3781 acattacggg gcacggcaga tgagcatacc attgaaccaa tccgaacgtc tgagggcgat
     3841 gaacgtcgat gtcgaaacga aggaaattat gcgcgagcta cgtccgttgg tcgcggcgca
     3901 aatcgatgcc gcgatcaccg cagcctacga ccactgcatg cgcttccccg agttcaagaa
     3961 gacctatgcc ggcgtcgata tggatgaagc gaaacgcgct caaaggcagc actggctgga
     4021 cgacgttttc gccgccacct tcaccgatgc gcaacttgcc cacacggttg agatggcggc
     4081 tggccgacaa cgcagcgggc tagagatgcg ctggtttttc gtcttctgga gcatcgtctt
     4141 cgccaggctg acggacgcca tcacgaccgc ctaccgcaag aagtcggacc ggctgccgaa
     4201 gctgctcgcc acgttgggca aggtggtgct tttcgacctg gagctattct gcgcggttta
     4261 tatcgatgcg gcggccggcg ctgcctccgg ccaactcaac cagcgggccg atgcattcga
     4321 gcgagagttg ggcgatctgg tcaaaaccgt cgcggactct gtcacgaagg ttcagggcag
     4381 cgcccgaacc atgtcctctg ccgccgagca aaccgcgggg caggcgagga cggcgcttca
     4441 ggccggagcg caggccggga gccatgccca ggaggtgacc ggcgcgacgg aggggctgac
     4501 gtcgtcggtg caggagattg gccgtcaggt cgcccgctcc accgaaatcg ccgggacggc
     4561 ggtggatgag gcgcaacgga cgaatgcgtt ggttctcggt ctggccgagg ccgggagtcg
     4621 catcggcgat gtggtgcagt tgatcaaaag cattgccagc cagaccaacc tgctcgcact
     4681 gaatgccaca attgaggcgg cacgggccgg cgaggcgggc agggggttcg ccgtcgttgc
     4741 cggcgaggtc aagagcctgg ccaaccagac cgccaaagcg accgatgaga tcgccgccca
     4801 aatctcggcg gtgcaacggg ccacgcaaga tgctgtcgcc ggtatccagg gaattggcac
     4861 caccatcggt cagatcagcg agatcgccgg ggcgatgacc gccgcggtcg accatcagcg
     4921 cacggcgaca caggaaatcg cccaaagagt gcaggaggtg gcacgcagta gcggcgtcgc
     4981 cagcagcagc atggaagcgg tgaatgactc ggcaacgcgc accggatctg cagcccagac
     5041 ggtggcgagc gggatggatg agttgacgcg gcagtcggaa cagttgcgct cacaggtcgg
     5101 gcaatttctg ggacggctca ggtcgagtgg gtgaggggcg acggccgggc agcggccgtt
     5161 gacctcattc aagccccatc ccgcccgcgc gcgccaggtt gccccaccgg cagccacacg
     5221 ctcaccgtcg tgcccttgcc ttcctcgctc tcgatcgaca actggccccg atgccggctg
     5281 gtaatgtgct tgacgatcgc caatcccaga ccggtaccgc cggcggcgcg agaccgcccc
     5341 ttgtcaacgc ggtaaaaccg ctcggtcacc cgcggaaggt cagcgcgtgg aatgcctggt
     5401 ccttcgtccg acacagccag cacggcacca ggccgcgccg gccaaccctt gccggaagcc
     5461 gcgggcccgc tggtcaggcg taccgtccca ccctccttgc cgtacttcac cgcgttatcc
     5521 agcaaattct gggttacctg agcgatctga tcggcatcgc caatgaccgg cggcgtgtcc
     5581 ggcgcgatct cgacctcgat ccgcgtcccg ccgcccgcca gcctcggttc gtacccggcc
     5641 acgatcctgg gcagcagcgc cgcgagatcg accgtgtcgg agggcgcctg gtgttccacc
     5701 atttcaatgc gcgacaggct cagcaggtcg tcgatcaacc ggttcatgcg cgcgccttgc
     5761 tctgccatga tggtcagaaa gcgcttgcgt gccggcgggt cattttccgc gggtcccagc
     5821 agcgtctcgg tgaaaccgat caacgaggcc aacggcgtgc gcaactcatg gctcacattg
     5881 gcaacaaaat cggtgtgcga gcgctgcgtg ctgtgttcgg tcgtgcgatc cgacagcacg
     5941 accacagccc gcccgccatc ctgcagcggc gggttcatcg gcacgaccgt cgcgcgcagc
     6001 tcgcgttcga tcggaccgcc gatcgaaatt tcgacagcgc gcgtctcgcc atcgccaatc
     6061 gccaggtcaa gcgcagcgcg caggtccggg tgacgcagca cggaaggcag gtcggcgcca
     6121 aagatcgcgt ccgcagcggc gttgcgccga atgaccgtgc gatcctggcg caacacgacg
     6181 agagcgtccg gcaaccgctc caggatcaag gtgtcggcgc gccgtccctg ttcgatttgc
     6241 g
//
LOCUS       DATAVD010000489         3221 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_976200, whole genome shotgun sequence.
ACCESSION   DATAVD010000489 DATAVD010000000
VERSION     DATAVD010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3221
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_976200"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1246)
                     /locus_tag="VHX39_09060"
     CDS             complement(<1..1246)
                     /locus_tag="VHX39_09060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991305.1"
                     /translation="MSTINTTINHGVILGQPGYYTPLTITSTGAVNNNGTGKAIFGGG
                     ETVVNYGRITATGNSGGYGYQAVYLGGGYVNNHGTITADGSAVLLQAAGTVVNSGFIY
                     GQRWGVTSRGLVTVANTGTISGGSQGIVLSGGGVITNSGLIAGGDGIGISGAAGTVVN
                     SGSISSYGAAVYLFEGGTAVNTGTGLISTDGLYAGVMVAGGAGSVINSGTIDGYLGVE
                     FAGTYNDTLIDSGTIIGSGGAAVLFGSGNDLMQFQPGTALVAGSVDGGGGTNTLEFAA
                     GGGTLIGQGADFVDFSQGTVDAGSQWSIGGNVTLGAGIDLTISGNLSVAGTLENAGSI
                     SPIGYLEIAAGGYLRNDASGTIVNHSERPRFDPTVYAPGGGDVTIVNLGAIEDPAGNA
                     SIYLVDGGTVVNGSATDTSALIS"
     gene            complement(1732..>3221)
                     /locus_tag="VHX39_09065"
     CDS             complement(1732..>3221)
                     /locus_tag="VHX39_09065"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX3991306.1"
                     /translation="TSSFDAVHDTTNQFHGLAYLADIIDPDTRVSLILGGFNGSFQIP
                     DNPGQATLGFPVLGTSSFNSAKLNETQTEDTEFGILSLQKHIDDVDVQLSAYTRLSRL
                     QFTPDPIGDLLFNGIAQNATRTDQAYGVQADASWAATEHHTIRFGMLAQEEGVVSKTL
                     SDVLPVDADGSPTTDVPEGIADTSAKQGGLYGVYVQDEWRILPTVTINSGLRFDGVDE
                     YTSGTQLSPRLNVVWKPTETTTLHIGYARYFVPPPFELVGTSTLAKFGNTTGAPLSPQ
                     DSTVLPERSNYYDIGISQIIIPGLTLGVDAYFKQSQDLIDEGQFGAPIILTAFNYKKG
                     MQEGVELTGSYDHGPWSVYGNVALSRAMGKDIVSAQYNFAPDELAYIANNWIHLDHDQ
                     LWTGSAGIAYTANSDSEHPTRVSVDAIVQSGLRAGFANLQTLPPYGVVNLSVVQKVAA
                     RTELRLDVLNVGDNVYEIRDGTGVGVGAPQYGIRRTILAGVTQRF"
BASE COUNT          604 a         1019 c          967 g          631 t
ORIGIN      
        1 cgctgatcag cgcggacgtg tcggtcgcgg aaccgttaac caccgtgccg ccatccacca
       61 gatagatcga tgcgttgccc gccggatcct cgatcgcccc gagattgacg atggtgacgt
      121 cgcctccgcc gggtgcatac acggtaggat cgaagcgtgg acgttcgctg tgattgacga
      181 tggtcccgga cgcatcgtta cgcagatagc cgccggcggc tatttccagg tagccgatcg
      241 gcgagatcga accggcgttc tccagcgtgc ccgccacgct caaattgccc gaaatcgtca
      301 ggtcgatacc ggcacccagc gtaacgttgc cgccaatgct ccactggctg ccggcgtcga
      361 ccgtgccttg gctgaaatcg acgaaatccg caccttgacc gatcagcgtg ccgccacccg
      421 cggcaaactc cagcgtgttc gtgccaccgc cgccgtcaac gctgcccgcg accagcgcgg
      481 tgcccggctg aaactgcatc aggtcgttgc cggagccaaa caggaccgcg gcgccgccgc
      541 taccgataat tgttccggag tcgatcagcg tgtcgttgta ggttccggca aactcgacac
      601 cgaggtagcc gtcaatcgtg ccgctgttga taacagagcc ggcgccgccg gcgaccatga
      661 cccccgcata cagcccatcg gtcgatatca gccctgtccc ggtgttgacg gcggtaccgc
      721 cctcgaacag gtacacggcg gcgccgtagc tgctgatgct gccgctgttg acgaccgtgc
      781 cggcggcacc gctgatgcca atgccatcgc cgccggcgat caggccgctg ttggtgatga
      841 ccccaccgcc ggacagcacg atcccttggg agccgcccga gatcgtgccg gtgttcgcga
      901 cagtgaccag gccccgactg gtgacgcccc aacgttggcc gtagatgaag ccgctgttga
      961 cgacggtgcc ggcggcctga agcaagaccg cactgccgtc cgccgtgatc gttccatgat
     1021 tgttgacgta accgccgccg aggtagacgg cctgataccc atagccgccg gagtttccgg
     1081 tcgcggtgat cctgccgtag ttcacgaccg tctcgccgcc gccgaagatc gccttgccgg
     1141 tgccgttgtt gttgacggcc ccggtcgaag tgattgtcag cggcgtgtaa tagcccggtt
     1201 gcccgaggat gacgccatgg ttgatcgtcg tattgattgt agacatttga ccccccgaac
     1261 gcgggcgatc ggatcaacga tccacccagg taccctgtcc gcgtccccca cggacgttac
     1321 gctgtcgcca gccgttgcta tcgggctcgg tcggtagtcg gcaagccggc ttttcatcac
     1381 atcaatgtga tgtttattaa tacgattgag tcgcggacgg atccggcatg cacggtccag
     1441 gcgatacacg cgccaccagg cacccgtggc acgcggttgg ataaagattt cgttacaaaa
     1501 taacaataac tcttgttggt gacccatcag caccgccgcg caaccgtcat agcgagcgca
     1561 ggctcgccat ccatgcctct gtttccgctc ataaaaggcc tggatgccga ccccctccag
     1621 catgacggac gggggtcaac cgaagagtct gcatcaacgc cggtgggtat aacatatgtg
     1681 ccacggcaat tagcgcgtga aaggcccgga ttgcgccggg ccagacattt atcaaaaccg
     1741 ctgtgtcact ccggcaagga tggtgcgccg gattccatac tgcggtgcac cgacgccaac
     1801 accggtgcca tcgcggatct catagacatt gtcgccgacg ttcaggacat ccagccgcaa
     1861 ttcggtccga gccgcgacct tctgcaccac cgacagattg acgacgccgt acggcggcaa
     1921 cgtttgcaaa ttcgcgaacc cggcacgcag gccgctttgc acgatcgcat cgaccgacac
     1981 ccgcgtggga tgctcgctgt cgctattggc ggtgtaggcg atccccgccg aaccggtcca
     2041 aagctggtcg tgatccagat ggatccagtt attggcgata taggccagtt catccggcgc
     2101 gaaattatat tgcgccgaaa cgatatcttt tcccatcgcg cgcgacagcg ccacattgcc
     2161 gtagaccgac caggggccgt gatcgtagct gccggtcagt tcgacaccct cctgcatgcc
     2221 tttcttgtag ttgaacgcgg tcaggatgat cggggcgccg aactggccct catcgatcag
     2281 atcctgggat tgcttgaagt aggcgtccac acctaacgtc aggcctggaa tgattatctg
     2341 acttatccct atatcgtaat agttcgatcg ctccggcagc accgtgctgt cctgcggcga
     2401 tagcggcgcg ccggtggtat tgccgaactt cgccaatgtc gaggtcccga ccagttcgaa
     2461 cggcggcggc acgaagtaac gcgcgtaacc gatgtgcagc gtggtggtct cggtcggctt
     2521 ccatacgacg ttcaaccgag ggctgagttg cgtgccactg gtgtattcgt ccacgccatc
     2581 gaaccgcagc ccgctgttga tggtcaccgt gggcaggatg cgccactcat cctggacata
     2641 gacgccgtac agcccgccct gcttggcgct ggtgtcggcg atgccctccg gcacatcggt
     2701 ggtgggactg ccatcggcgt ccaccggcag cacgtcggac agggttttgg aaaccacccc
     2761 ctcctcctgt gccagcatgc cgaagcggat cgtatgatgt tcggtggcgg cccagcttgc
     2821 atcggcctgc acgccgtacg cctggtcggt acgcgtcgcg ttctgggcga tgccgttgaa
     2881 cagcaggtcg ccgatcggat cgggagtgaa ttgcagccgg ctcagccggg tataggcgga
     2941 aagctgcaca tccacatcgt cgatatgttt ctgcagcgac aagatgccga actcggtatc
     3001 ctccgtctgg gtttcgttca gtttggcgct gttgaagctg gacgtgccaa gcaccggaaa
     3061 gcccagggtc gcctggccgg ggttgtcggg tatctgaaaa ctgccgttga atccacccag
     3121 aatcaggctg acccgagtat ccgggtcgat gatgtcggcc aggtaggcca gcccatgaaa
     3181 ctggttcgtc gtatcatgga cggcatcgaa gctggatgtg g
//
LOCUS       DATAVD010000490         2029 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3584584, whole genome shotgun sequence.
ACCESSION   DATAVD010000490 DATAVD010000000
VERSION     DATAVD010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3584584"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..496)
                     /locus_tag="VHX39_09070"
     CDS             complement(<1..496)
                     /locus_tag="VHX39_09070"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX3991307.1"
                     /translation="MPRSLSKAQIAQYRRDGFLFPVDCLTADEVRYFRGRLEAFEREQ
                     GDTFGRLPDLVRSKSHLLFTWMDELVRHPKVLDAVESLIGPNILIYHLTSWLKEPNEP
                     SHVSWHQDGTYFGLEPFEQITAWIALTDATPEMGCVRIIPGSHVIGQRPHRDTSVPGN
                     LLSRG"
     gene            complement(499..1680)
                     /locus_tag="VHX39_09075"
     CDS             complement(499..1680)
                     /locus_tag="VHX39_09075"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3991308.1"
                     /translation="MPNLPLHGLKVLDLTAHRAGPTAVRQLADWGADVIKIEPPGEAK
                     GDVVGGNRRGFDFQNLHRNKRGMTLNLKTPEAHAIFMQLAKDADVVVENYRSDVKYRL
                     KVDYDTIAAVNPRIVYGSISGFGQSGPDATRPGVDQIAQGMGGLMSITGLPGQGPVRV
                     GIPIADLTSGIFLSQAILLALMQRAQTGKGQWVHTSLLEAQIFMLDFQASRWLIAHEV
                     PGQAGNDHPTGIPTGVFPTADGHINIAASGQGLWERFCKAIGWEEALSIPDYANGGLR
                     SKNRKVLNERIGAITRLKPSAYWLETINKAGVPCGPINNIEGVFAEPQTQHLGIARTV
                     HHPALGDIRVVGQPINMTDNPQPEALRPTPELGQHTDAILAELGYAPAAIADLHARGI
                     V"
     gene            1809..>2029
                     /locus_tag="VHX39_09080"
     CDS             1809..>2029
                     /locus_tag="VHX39_09080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991309.1"
                     /translation="MIAARLAFAGLLLATVSTAQGDPLPRVAEASNMTLIGHSDLNGA
                     GKGGEGLALHQYPDGRRILFLAHESAPMCV"
BASE COUNT          383 a          659 c          606 g          381 t
ORIGIN      
        1 ggccgcgcga cagcagattg ccgggcaccg aggtatcccg gtgcggccgt tggccgatca
       61 cgtgactgcc cggaatgatc ctgacgcagc ccatctccgg cgtggcgtcg gtcagcgcaa
      121 tccaggccgt gatctgctcg aacggttcca gaccgaaata ggtgccgtcc tgatgccagg
      181 acacgtgcga cggctcgttt ggctccttca accacgacgt gaggtgataa atcaggatat
      241 ttggcccgat cagactttcc accgcatcga gcaccttcgg gtgacgcacc agttcgtcca
      301 tccaggtgaa cagcaaatgc gactttgaac gcacgaggtc cggcaaccgg ccaaatgtgt
      361 cgccttgttc gcgttcgaac gcctccagcc ggccacgaaa ataccgcact tcgtccgctg
      421 tcaggcaatc gaccggaaac aggaaaccat cgcgccggta ttgcgcgatc tgcgccttcg
      481 acagactacg cggcatggct agacaattcc gcgtgcgtgc agatcggcga tcgcggcggg
      541 agcgtaacca agttccgcca gaatggcatc ggtgtgctgg ccgagttccg gcgtgggacg
      601 cagcgcttcc ggctgcggat tgtcggtcat gttgatcggc tgccccacca cgcgaatatc
      661 gcccaatgcc ggatggtgca cggtccgcgc gatgccgaga tgttgggtct gcggctcggc
      721 aaacacgccc tcgatattgt tgatcggacc gcacggaacg ccggccttgt tgatggtttc
      781 cagccagtac gcactcggct tcaaccgcgt gatcgcgccg atccgctcat tcagcacttt
      841 gcgattcttc gagcgcaggc caccgttggc gtagtccgga atggacaacg cctcctccca
      901 gccgatcgcc ttgcaaaacc gttcccaaag tccctggccg gaggcggcga tgttgatatg
      961 cccgtcggcg gtcgggaaca cgccggtcgg aatgccggtc ggatgatcgt tgccggcctg
     1021 gcccgggacc tcgtgcgcaa tcagccaacg cgacgcctgg aagtccaaca tgaagatctg
     1081 cgcttccagc aacgacgtgt gcacccactg gccctttccg gtttgcgcac gttgcatcag
     1141 cgccagcaaa atcgcctgcg acagaaaaat ccccgaggtc aggtcggcaa tcggaatgcc
     1201 cacccgcacg ggcccctgtc ccggtaagcc cgtaatagac atcaatcccc ccattccctg
     1261 ggcgatctga tccacgccgg gccgcgtcgc atcaggcccg ctctggccaa accccgagat
     1321 gctgccatac acaatccgag ggttcactgc ggctatggtg tcgtaatcca ctttcaaccg
     1381 gtacttcacg tcggagcgat agttctccac gaccacgtcg gcgtctttgg ccagttgcat
     1441 aaaaatcgcg tgtgcttccg gcgttttcag gttcagcgtc atgccgcgtt tgttacggtg
     1501 caggttctgg aagtcgaagc cacgacggtt gccgccgacc acgtcgcctt tggcctcacc
     1561 gggcggctcg attttgatta cgtccgcgcc ccaatcggcc agttgccgaa ccgccgtcgg
     1621 gccggcgcgg tgagcggtca ggtccagcac cttgagacca tgcagcggga gattgggcat
     1681 cacagagctc cttatcagat gccccattct ggtacagccg cgtccgcccg catagagcat
     1741 ggcgccaggg cttgaccgcc aaccgcacct ggccgctaaa agaccgcaac caatgccgag
     1801 gaaacgccat gatcgcagca cgtctcgcct ttgccggtct gttacttgcc acggtgtcga
     1861 cggcccaggg cgatccgctg ccaagggtgg cggaggccag taatatgacg ttgattgggc
     1921 acagcgatct gaacggggcc ggcaagggtg gcgagggcct cgcgctgcac caataccccg
     1981 acggcaggcg gatcctgttc ctggcgcacg agtcggcgcc aatgtgcgt
//
LOCUS       DATAVD010000491         1960 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3584872, whole genome shotgun sequence.
ACCESSION   DATAVD010000491 DATAVD010000000
VERSION     DATAVD010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3584872"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..323)
                     /locus_tag="VHX39_09085"
     CDS             complement(<1..323)
                     /locus_tag="VHX39_09085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3991310.1"
                     /translation="MPKRKPKTEDPGKAGDRLNIRIDLAGGLRIGPGKVAVLEEIARS
                     GSISAAGRALRMSYRRTWELVEDLNTGLGTPVVETAAGGSGGGGTVLTPAGKAVIERY
                     RAIEM"
     gene            453..1463
                     /locus_tag="VHX39_09090"
     CDS             453..1463
                     /locus_tag="VHX39_09090"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3991311.1"
                     /translation="MPRQEAEMLRRLIVILPLLWCSAAFGVEVTDSTGRIVQVPAVIA
                     KVLPAGPPAAILLEAIAPDLMVGWPGPLSDDARAMLPDSANHPRVPRVTGREDVTDKI
                     KALQPDLILDYGEVTPRYFELAQATQQKTGIPTLLFAGALDKIPLIVRQVGALLHREA
                     RAETLATYFEAMLALPVRPLPTTLGAHPRVLYARGADGLTVTAPETDVTEVFKHLGWE
                     VLAPEGSGTFRTSSIAAIAALDPDIVIFSDPLMRETVAHPDAWKSVRAVRDGHALVAP
                     ALPFGWIEEPPSINRVLGFAWLSGHEPATLAATFNAVVYGRALAPAQLDSVLTGIHSL
                     QP"
     gene            1475..>1960
                     /gene="modA"
                     /locus_tag="VHX39_09095"
     CDS             1475..>1960
                     /gene="modA"
                     /locus_tag="VHX39_09095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX3991312.1"
                     /translation="MRFLYVLLVLLLPLTARAQEVTVFAAASLTDAMKDISVKWAAAG
                     HKPLVMSFGSSSTLARQIEQGAPANVFASADEKWMDYLAQKNLIVADTRKDLLGNDLV
                     LVVPADKPTHVTISKSFDMLGLLGASGRLATGDPAHVPVGIYAEQALKKLGMWDGVSP
                     RL"
BASE COUNT          329 a          611 c          618 g          402 t
ORIGIN      
        1 tccatttcga tagcgcggta gcgttcaatg acggccttgc ctgccggggt caatacggtg
       61 ccgccgccgc cgctgccgcc cgccgcggtc tccaccaccg gcgtgccgag tccggtattc
      121 aggtcctcga ccagttccca ggtccgccga taggacatcc gcaacgcccg ccctgcggcg
      181 gaaatcgagc cggagcgggc gatttcctcc agcacggcga cttttccggg tccgatccgc
      241 agtccgcctg ccagatcgat cctgatattc aggcgatcgc cggccttgcc cgggtcctcg
      301 gtttttggtt ttcgctttgg catgacaaca tacccaaaca cggccggggc gcgggatcaa
      361 tcacgcgaac gtatgggcag atcggagcca tcgggggacc aggtgggatt tccctgtccg
      421 cctgtttgtc gctatatcgc ccggactata ccgtgccacg ccaagaggcc gagatgctgc
      481 gccgcctgat cgtcattctg ccgttactct ggtgctccgc ggcatttggc gtggaggtca
      541 cggattccac cggccgaatc gtgcaggtcc cggcagtgat cgcgaaagtg ctgccggccg
      601 gtccgcctgc cgccatcctc ctcgaagcga tcgcccccga tctcatggtc ggctggcctg
      661 ggccgttgtc cgacgatgca cgagcgatgc tgcctgacag cgccaaccac ccacgcgttc
      721 cgcgcgtgac cgggcgagag gacgtgaccg ataagatcaa agcgctgcag cctgacctga
      781 tcctcgacta cggtgaagtg acaccgcgtt attttgaact ggcacaggcg acccagcaaa
      841 agaccgggat cccgacattg ttgttcgcgg gtgcgctgga caagatcccg ctgatcgttc
      901 gtcaggtggg cgccctgctg caccgcgagg cccgcgccga gacactggca acatattttg
      961 aagcgatgct ggccttgccg gtccggccgc tgccaacgac gttgggtgcg catccccgtg
     1021 tcctgtatgc gcgaggcgct gacgggttga ccgtcaccgc gccggaaacc gacgtgaccg
     1081 aggtgtttaa gcacttgggc tgggaggtgc tggcacccga aggttccggc acattccgca
     1141 cgtccagtat tgcggcgatc gctgcgcttg atccggatat cgtgattttt tccgacccct
     1201 tgatgcgcga gacggtcgca catcctgacg cctggaaatc ggtgcgcgcg gtgcgcgacg
     1261 gtcacgctct ggtggcgccc gctttgccgt tcggttggat tgaagaaccg ccatcgatca
     1321 atcgggtact gggctttgcc tggttgagcg gacatgaacc cgccacgctt gcggcgacgt
     1381 tcaacgcggt ggtttacggt cgtgctttgg cgccagccca actcgactcc gtgctcaccg
     1441 gcattcattc tttgcaacca tgagaggctt tgccatgcgt ttcctttacg tcctgcttgt
     1501 cctgctgctg ccgctgaccg cgcgcgccca ggaggtcacg gtatttgcgg cggcgagttt
     1561 gaccgatgcg atgaaggata tttcagtgaa atgggcggct gcgggccata agccattggt
     1621 gatgtcgttc ggttcgagtt cgactttggc acggcagatc gagcagggcg cgccggccaa
     1681 cgtgtttgcc tcggccgatg aaaagtggat ggattatctg gcacagaaga acctgatcgt
     1741 tgccgatacc cgcaaggatc tactgggcaa cgatctcgtc ctggtggttc ccgccgacaa
     1801 gcccacgcac gtgacgatca gcaaaagctt cgacatgttg ggacttctgg gtgccagcgg
     1861 acggctggcg accggcgatc cggcgcacgt cccggttggg atttacgccg agcaggcgct
     1921 aaagaagcta ggcatgtggg acggcgtttc gccccggttg
//
LOCUS       DATAVD010000492         5388 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_604332, whole genome shotgun sequence.
ACCESSION   DATAVD010000492 DATAVD010000000
VERSION     DATAVD010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5388
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_604332"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..361
                     /locus_tag="VHX39_09100"
     CDS             <1..361
                     /locus_tag="VHX39_09100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="NHLP bacteriocin system secretion protein"
                     /protein_id="HEX3991313.1"
                     /translation="AREVHPGMIVRISPVGTRKEEQGELLGTVTEISAFPVSAVGLRA
                     LLQNETLADSLSRQGSPNVARITLMERPGGGYKWTSARGEDVALSSGALSGLEVVVSL
                     HRPINLVVPTVRRFLGF"
     gene            613..1311
                     /locus_tag="VHX39_09105"
     CDS             613..1311
                     /locus_tag="VHX39_09105"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX3991314.1"
                     /translation="MNIDEVKASLRDNTFLGGLPEDVFNVVHSHGRLGRYAKGEVLFH
                     RGDEGSSMMLILSGSVKISNIGIDGREVVLNFLGPGDVNGEITVLDGLERTATATVLE
                     PTEAFTVFRRDLMPAILATPNSMLEIIEGLCGKLRVTSALIEDGLKDMPGRTARGLLR
                     LADHHGRNTKEGIVINLRLSQRDLGGYMGLSRENTSRQLSALRQRGIIAIEGATVLIR
                     DRTGLEAAAEADPD"
     gene            1454..2341
                     /locus_tag="VHX39_09110"
     CDS             1454..2341
                     /locus_tag="VHX39_09110"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX3991315.1"
                     /translation="MPYEEQLVTLFADISGSSGLYDSLGDAQAAEIVEQCVAIMTDAT
                     VRHGGTLLRTIGDEVMTTFPTVEAAANAACTMQEKISDKMFDVGRPIAIRVGFHFGSL
                     LLKDGDLYGDAVNFAKQVTNHAKPGQILTSDATLSQLPETARAFYRQIDIVQVKGKRE
                     EAAIYELVWQAEFATEMSASWTALPSESARLTLIAGNTHVELGEDRTSVSIGRSEGND
                     LILPYPTVSRLHARIGYIKGRFHLTDLSINGTYFLTDDGSSGCLHRDTRELTGSGTLG
                     LGEAISAESMVTVRFESIA"
     gene            complement(2377..2559)
                     /locus_tag="VHX39_09115"
     CDS             complement(2377..2559)
                     /locus_tag="VHX39_09115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991316.1"
                     /translation="MANKLDHIPALATCAAAAGELSEAEMNEIVGGTGKQASSGGSAQ
                     ETVTFEYGALMFQYGR"
     gene            complement(2710..3153)
                     /locus_tag="VHX39_09120"
     CDS             complement(2710..3153)
                     /locus_tag="VHX39_09120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991317.1"
                     /translation="MSNAPLLCPSAQPEQPDARVFGVQTTIADDQRRVGYLTETVPVT
                     PDLLVSLGQTSAPEVLRIAAPCMHGACMHFEGGACSLAGRVARMLAPVVGALPRCAIR
                     PSCRWFREQGPAACVRCPQVVTNSREGSGVPAEVAYPDGIAPQMP"
     gene            complement(3209..3403)
                     /locus_tag="VHX39_09125"
     CDS             complement(3209..3403)
                     /locus_tag="VHX39_09125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991318.1"
                     /translation="MQQLKKDLALADLPAPVSLTPDQLVAIAAGTAATLKAPGFFPII
                     VAGGIFGPVSQPTALPQFSV"
     gene            3992..4720
                     /locus_tag="VHX39_09130"
     CDS             3992..4720
                     /locus_tag="VHX39_09130"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3991319.1"
                     /translation="MTDAKVALIVGAGDATGGAVARRFAREGYTVCLTRRTEEKVRPL
                     VDQITSDGGRAFGFGSDARKEEATISLIASIERDIGPIGVAVFNVGGNVRFPIRETTT
                     RVYTKVWEMCALGGFFLGREAAKVMVPRGRGTILFTGATASVRGGAGYAAFAGGKAAL
                     RALAQSMARELGPEGIHVAHIVIDGAIDTEWLRATFPERHAAKGQDGILSPEGIAENY
                     WHLHNQSRDAWTHELDVRPWAERW"
     gene            4729..>5388
                     /locus_tag="VHX39_09135"
     CDS             4729..>5388
                     /locus_tag="VHX39_09135"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3991320.1"
                     /translation="MSGPLAGIRVIDLTTVVSGPVCTALLADQGADVIKIEPPGGDIT
                     RHTGGPGEFTAMFVACNRGKRSLALDLKQSSACDVVRRLAATADVLVQNFRPGAMDRL
                     GLGETALREINPRLIYVSISGVGETGPYAKKRVYDPVIQSLSGLADVQTDSETGRPRM
                     VRTIIADKTTAAFAAQAICAALFARERSGQGQHIRLSMLDTMVTFLWPEAMSAHAIVG
                     AD"
BASE COUNT         1040 a         1537 c         1742 g         1069 t
ORIGIN      
        1 cgcgcgcgaa gtgcatccgg gaatgatcgt gcgcatctct ccggttggca cccgcaagga
       61 ggagcaaggc gagctgctcg gtacggtgac ggagatttcc gccttcccgg tgagtgccgt
      121 tgggctgcgg gcgctgctgc aaaatgagac acttgcggat agccttagcc ggcagggcag
      181 tccgaacgtc gcgcggatta cgctgatgga acggcccggg ggcggttaca aatggacctc
      241 cgcccgcggc gaggatgtgg cactctcgtc cggcgcgctc tctgggttgg aggtcgtggt
      301 gagtttgcat cgtccaatta acctcgtcgt gccaacggta cgacggttcc ttggtttttg
      361 acggatccct tcggacgggg acgacggctg caagaccaaa atggacgttt cggcgattgt
      421 aacatcgctt cccatcgtct cgggcgtcga cacgacgctg cgtttcgatc tgggccggtc
      481 ccgtacataa actgagacct tgcccatgcg gtgaaaatgt cattatggta gtggatacca
      541 aatgatacct gccgcccgtc gaacggacgg cttgcgttgc tcaaccgttt tgcccaggaa
      601 aaattcactg ccatgaacat tgacgaagtc aaagcatcgc tgcgggacaa tacatttctg
      661 ggcgggctgc cggaagatgt cttcaatgtg gttcactcgc atggccgcct cggccgttat
      721 gccaaaggcg aggtcctgtt ccaccgcggc gatgagggca gcagcatgat gctgattctg
      781 tccggttcgg taaaaatctc caacatcggg atcgacgggc gcgaggtggt gctgaacttt
      841 ctcggccccg gcgacgtcaa tggtgagatc accgtgctcg atggtctgga acggaccgct
      901 acggcgacgg tactcgagcc aactgaagct tttacggttt tccggcgcga tctgatgccg
      961 gcgatcctgg caactccaaa ctcgatgctc gaaatcatcg aggggctttg cggcaagctc
     1021 cgcgttacct cggcgctgat cgaggacggg ctgaaggata tgccgggtcg gaccgcacgc
     1081 gggctgctcc ggctggcgga ccatcacggg cgaaacacca aggagggtat cgtcatcaat
     1141 ctgcggctca gccagcgcga tctgggtggc tatatgggcc tgtcgcggga gaacacgagc
     1201 cggcaacttt ccgcgctgcg gcagcgggga atcatcgcga ttgaaggtgc gaccgttctg
     1261 attcgcgatc gtaccggtct ggaggcagct gcggaggccg acccggattg agggaggaat
     1321 tcactcggcg gcgtctcagg ggttgacggc gcagctgttc cgaagtctgg atataaggca
     1381 tgcgttcgaa aaaagttgga ggtatcagtc aagggccgtt gtggcccgac aacatctgga
     1441 aaggaagacg cccgtgccat atgaggagca actggtcacc ttgttcgccg acatttccgg
     1501 ctcgagcggg ctttatgatt ccctgggtga cgcccaggcg gccgaaatcg tcgagcaatg
     1561 cgtcgcaatc atgaccgacg ccaccgtgcg gcacgggggt acgttgttgc ggacgatcgg
     1621 cgatgaggtg atgaccacat ttccaacggt tgaggctgca gccaacgccg cctgcaccat
     1681 gcaggagaag atctccgaca agatgttcga tgtgggacgc ccgattgcca tccgtgtcgg
     1741 atttcatttc gggtcgctgt tgctcaagga cggcgattta tatggtgacg ccgtcaactt
     1801 cgccaagcag gtcaccaatc acgcgaagcc cggtcagatt ctgacctccg acgccacttt
     1861 gtcgcagctt ccggaaaccg cgcgcgcatt ttatcgccag atcgacatcg tccaggttaa
     1921 agggaagcgt gaggaagccg cgatttatga actggtctgg caggccgagt tcgcgaccga
     1981 gatgtcggct tcctggacgg ctttgcccag tgaaagtgcg cggctgacgc tgattgcggg
     2041 taatacgcac gtggaattgg gcgaggatcg gacgtcggtc tcgatcggac ggtccgaagg
     2101 gaacgacctg atcctacctt atccgacggt atcgcggtta catgcgcgta tcgggtatat
     2161 caagggacgg ttccacctga ccgatctgag tatcaacgga acttactttc ttacggacga
     2221 cggcagcagc ggttgtctgc atcgcgatac aagggagttg acaggctctg gcacgcttgg
     2281 tctcggggag gcgatttctg cggagtcgat ggtgaccgtg cggttcgagt caatcgcgta
     2341 gttgatgtac tgggcaaagt tgtcagcgct gtagtgctac ctgccgtatt ggaacatcaa
     2401 tgccccgtac tcgaacgtga ccgtttcttg ggcggagcca cctgaggaag cctgcttccc
     2461 ggttccacca acgatctcgt tcatctcagc ttcgctcaac tctccagccg ccgcggcgca
     2521 ggtcgccaat gccggaatgt gatcgagttt gtttgccatg ggtaactcct gtttcacgcc
     2581 caggttgctg ttgatgtgcc gtcggcccgg gtccgaacgt catgtcgcga atatcggggc
     2641 ggttcgagca acaagctgtg ctctgcggca caggacgggc taattcgtgt cgaccctggg
     2701 gttgtacgtt cagggcattt gcggcgcgat gccatcagga taggcgactt ctgccggcac
     2761 gccgctgccc tctcgagaat tggtaacgac ctgcggacag cgcacacagg ccgccggtcc
     2821 ctgttcgcga aaccaacggc agctcgggcg tatcgcgcat cgcggcagag cccccaccac
     2881 aggcgccagc atacgcgcaa cgcggccggc cagtgagcaa gccccccctt caaaatgcat
     2941 gcaagcacca tgcatgcacg gtgcagctat acgtagcacc tcgggcgcag atgtttgtcc
     3001 cagagagacc aacaggtcgg gggtcaccgg aaccgtttcg gtcaaataac cgacccggcg
     3061 ctggtcgtcc gcgatggtgg tctgcacacc gaacacacgg gcgtcaggct gttcgggttg
     3121 cgcacttggg catagcaggg gggcgttgct cactggcgtg tctccacttt cgcgtagtgc
     3181 tggtgcctct gggaacgaag cgttgcagtt acacgctgaa ctgcgggagt gcggtcggct
     3241 gactgaccgg tccgaaaatg cctccggcga caatgatcgg gaaaaagcct ggcgccttga
     3301 gcgttgccgc tgtcccggcg gctatcgcca ccagttggtc gggggtcagt gaaaccgggg
     3361 ccggcaagtc tgccaacgcc agatctttct tcagttgttg catggctggt tctcctgttg
     3421 gaattggaag tcacgccatc ggcattgcca cgtttgatgg cgacggacgg atcatgtgcc
     3481 gggtgcactc cagagtctgt gctgcaaggc acacgcttcg gtgctgcgag gcaccggcgt
     3541 ttttttgatc gctgcgtggc ctggcgagtc cctcgtcatc cgatatgaca accgaggcat
     3601 gcagactgaa aaccgggtac cttggtgggt gaatccgctg gttccgtcgc gcctgccgaa
     3661 cgcccctaat gtcgcgttca aggggcgggg cggtacggtg atccttcgac gacctcctcc
     3721 ccaatcaaga gcacaagggc gaccccggcc tccgaatggc gcttgcggta tcagagcagg
     3781 aggaggtaac tatcatcacg ataccagagg gtcggtggga ctcatgctgc aaaataccga
     3841 gcgaaagatg gtcttgcgga cggcaccggt gcgtgttgcc aggggagcat cgcggcggga
     3901 cttgcgatac caaccgctgc ttcacctcaa agcccgggtc gctttcacgc aacttaccgg
     3961 tcctacgatc aaacccaggg gtgcaaagtg aatgactgat gcgaaagttg cgctgattgt
     4021 gggcgcagga gacgcaaccg gcggcgccgt cgcccgacgg ttcgcgcgcg aaggatacac
     4081 ggtgtgcctc acccgccgaa ccgaggagaa ggtgcggccg ttggtcgacc aaatcaccag
     4141 cgacggcgga cgcgcctttg gtttcggcag cgacgccagg aaggaggaag caacgatctc
     4201 gctgattgcc tcgatcgaac gcgacatcgg accaattggc gtggcagtct ttaatgttgg
     4261 cgggaatgtc cggttcccga tccgcgaaac gacgacgcgg gtctacacca aggtgtggga
     4321 gatgtgcgcc ctgggcggtt tctttctcgg tcgcgaggct gccaaggtca tggtgcccag
     4381 gggacggggc acgatcttgt tcacaggtgc aacagcaagt gttcgaggtg gagccggata
     4441 cgcagcattc gccggcggca aggcggcgtt gcgcgcgttg gcgcagtcca tggcccgcga
     4501 actgggtccg gaaggcatcc acgtcgccca tatcgtaatc gacggcgcga tcgataccga
     4561 gtggctgcgc gccaccttcc ccgagcggca tgcggccaag ggtcaggacg gtatcctgag
     4621 ccccgagggg atcgccgaga actactggca tttgcacaat caatcccgcg acgcctggac
     4681 ccatgaactc gatgtccgtc cgtgggcgga acggtggtga acgccgagat gtcgggacca
     4741 ctggcaggaa tccgcgtcat cgacctcacc acggtcgttt cgggaccagt atgcacagcg
     4801 ctgctcgccg atcagggcgc agacgtgatc aagatcgagc cgccaggcgg agatatcacg
     4861 cggcacaccg gaggtccggg cgagttcacc gcgatgttcg tcgcctgtaa ccgcggaaag
     4921 cgctcgctcg cgctggattt gaaacaatcg tcggcgtgcg acgttgtccg gcgattggcc
     4981 gcaacggccg acgtgctcgt gcagaatttc cggcctggcg ccatggatcg tctcggactg
     5041 ggtgagaccg cattgcggga gatcaatcct cggctgatct atgtttcgat cagcggggtc
     5101 ggggaaaccg ggccgtatgc gaagaaacgg gtgtacgatc ccgtgatcca gtcgctgtct
     5161 ggcctggctg atgttcagac agacagcgaa accggccgac cgcgcatggt ccgcacgatc
     5221 attgcggata agacgacggc cgccttcgcc gcgcaggcga tttgtgccgc tttgtttgcg
     5281 cgggagcgct ccggacaagg gcagcacatc cgactatcga tgctggacac catggtgacc
     5341 ttcctgtggc ccgaggcgat gtcggctcat gcgattgttg gcgctgac
//
LOCUS       DATAVD010000493         7840 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_976764, whole genome shotgun sequence.
ACCESSION   DATAVD010000493 DATAVD010000000
VERSION     DATAVD010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7840
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_976764"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            169..1074
                     /locus_tag="VHX39_09140"
     CDS             169..1074
                     /locus_tag="VHX39_09140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3991321.1"
                     /translation="MSAEAMPVNDGGPIIRYFDREKPEEVAAPVPKTMRLPAWINPDR
                     LITVASACLSIGFLFVVWYLGTKYRVTFFIRFQNIPTPYEVLLQAGEVSRSTKFLINV
                     GMSMERILLGFAVAIVVGVPLGLLIGRYRRVKELVMPAVEVLRPIPAIAWVPISIMLW
                     PSNESSIIFITFIGAFFPILLNTVHGVHAMDGVLVRAGQCLGANELQLFWHVILRGAL
                     SYIFTGLAIGMGVAWVSLIAAEMISGQYGVGYYTWESYSLVNYPAIVLGMITIGMLGL
                     LCSGAIRLVGHLTMPWLAFAPGSKK"
     gene            1071..1925
                     /locus_tag="VHX39_09145"
     CDS             1071..1925
                     /locus_tag="VHX39_09145"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3991322.1"
                     /translation="MSDRGFIDVQDVSVQFANREVVVQAVQNVSLTVRPNEFVSLIGP
                     SGCGKSTLLSIVAGFAKASNGQAQLDGVPITGPSSERGVVFQQYSLFPWLTVRKNVEF
                     GLRMNGVARSKRESSARTLLGLAGLLAFENHYPDQLSGGMKQRIGIVRALATSPQVLL
                     MDEPFGALDTQTRTVMQEILTNMWQQFRISVLFVTHDIEEAVFLSDRIYVMTARPGRI
                     KAEVRVPLPRPRTAAMTETPGFMELVHKLKGLIREESIAAMGSELKSGGLTGFGVDVG
                     PQGVGQLL"
     gene            1992..3359
                     /locus_tag="VHX39_09150"
     CDS             1992..3359
                     /locus_tag="VHX39_09150"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfatase"
                     /protein_id="HEX3991323.1"
                     /translation="MTSAKPNILFFHVDNLGMGELGCYGGGKLRGADTRRMDQFAKEG
                     TKLTHYVVEPQCTPTRSALMTGRFPIRSGNHTIALGGNGGGIVTWERTIAEILAEAGY
                     ANAIYGKWHIGAEAGRFPTDHGFDEWYGPLRTYDECMWLEDPHYQPERDGFSHMHEGV
                     KGKGAWPLQDEQLTMETKKTCDLEYQNRALKFMEKSAQAGKPFYCYFNHSLMHFPMLP
                     RDEFKGKSTNGDWGDCLLMLDHDFGVLLDKLDELGIRDNTIVVMCGDNGAEDHLAGRG
                     TGGFFDGSYFSSAEGGIRTPLLIRWPGKIQAGVESNEMVHVTDMFTTLLSFVGCSAPK
                     DRLIDGVDQSAFFLGDQQVSNRESCIVWLKDELHAVKWKDFKINFKRQQHFHDPELPL
                     GFARITHLQEDPKEREPVNQRYVRWWVMQHAHRIVRAFEDSVKQEELIPPGSPLDFVP
                     RQADR"
     gene            3422..4294
                     /locus_tag="VHX39_09155"
     CDS             3422..4294
                     /locus_tag="VHX39_09155"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HEX3991324.1"
                     /translation="MVWVQAGDFLMGSDRFYREERPVHRRNVDGFWIDRHLVTNRAFA
                     RFVDATGYRTMAEQQPDPRLYPDAAPSLLAPGSSVFRKPQGPVSLGDYRAWWDYVPAA
                     NWRHPEGPGSDISDRMDHPVVHVGYDDARAYAAWAGKSLPTEAEWEFAARGGLDGAAY
                     AWGDEPMPGGRIMANTWQGRFPWENLAEDGYEGTSPAGAFPANGYGLFDMIGNVWEWT
                     DSPVTPHAAATHGCCSPGDNDPRTTRRIVKGGSHLCAPNYCLRFRPAARQAEPIDTST
                     SHIGFRCIRRPSPS"
     gene            4406..5110
                     /locus_tag="VHX39_09160"
     CDS             4406..5110
                     /locus_tag="VHX39_09160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase C-terminal
                     domain-containing protein"
                     /protein_id="HEX3991325.1"
                     /translation="MIRFYFHPTPNPAKVALLLEEAGLPYETIPVDTSKGEQHAPAFR
                     AINPNGKVPAIVDTAGPGGKEARVFDSTAILLYLAEKTGTFLGTPEDRPELLSWLLFI
                     ASGLGPFSGQAVHFQFAAPGGLEYAANRYRREAERHYEVLNDHLAGREFIVGDTYTIA
                     DMSAWGWLDRAARVMKGLDDPLAAYPHLKRLFQMVDARPAAQRARAVGKGHDFKKTND
                     DETKRALFPSNYPSAA"
     gene            5146..5880
                     /locus_tag="VHX39_09165"
     CDS             5146..5880
                     /locus_tag="VHX39_09165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991326.1"
                     /translation="MERLQDLADRQWRDYRARVPGTCFADPDFAPPLADAYALQDAVA
                     RIRTSAGDRIIGYKVGCTGPGTVRQFGMQGPIRGCLFESEIRKYDDSLDFDDFASPAI
                     EGEMAVRIAPDGTIAAAFPVIELHHFVFRGSRKTLPELVANNGLNAGFVLPHDDWLSS
                     QTYIAEKGTLSVRINGHTVASGDLWPMPGGAEASLEWLRRHLALDLLPGHVILTGTPL
                     GLYPVRRGDHVAVFVNHEIGSKCQVA"
     gene            complement(5885..6583)
                     /locus_tag="VHX39_09170"
     CDS             complement(5885..6583)
                     /locus_tag="VHX39_09170"
                     /inference="COORDINATES: protein motif:HMM:NF018473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1223 domain-containing protein"
                     /protein_id="HEX3991327.1"
                     /translation="MRVWLAVAIGTLIPSLVVAQPASRPVVGELFTSEGCSSCPPADA
                     KLAELAKTHPDLLLLAFHVTYWNNLGWHDPFSFDAATQLQRRYVALGISPEVYTPALI
                     VDGRLDAVGSDGAAVDHAFRQAALTRETAAQIQVERGPGGLTVSVGAGAGTGTLVLIG
                     YDRLHQTHVGRGENSGRTLEEADIVRSMSILGPWSGQPVHLNVPYPAGQDVAVLLQRA
                     DGHIVGAGVARAAS"
     gene            6984..7490
                     /locus_tag="VHX39_09175"
     CDS             6984..7490
                     /locus_tag="VHX39_09175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX3991328.1"
                     /translation="MMAAAQAGDAHAYRILLAELASWLRRYYRPRLPPAMTEDAVQDV
                     LLAVHEKRHTYDPSRPFGPWLAGIARYKWIDRLRALKMQATEPLDDNIRVPDHEEAVV
                     AGSTFQHLLDSLKPAQVEAIRLVKLEGYSVEEASRATGQSVSLIKVNIHRGLKRLASI
                     IRKTDDAH"
     gene            7558..>7840
                     /locus_tag="VHX39_09180"
     CDS             7558..>7840
                     /locus_tag="VHX39_09180"
                     /inference="COORDINATES: protein motif:HMM:NF018264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrsF family protein"
                     /protein_id="HEX3991329.1"
                     /translation="MLLLALGAIEIAVYLGLGFMRPDMQTAMDAPSFWWKLTSLGLIA
                     ALGAGVALLSVDPSRSPRPGLRFMLVCIAAVFVSGWAIDASGDGFAHLLS"
BASE COUNT         1497 a         2623 c         2352 g         1368 t
ORIGIN      
        1 tcttcgccgt gaacgacaag aatccccaaa agcccaaaat cacgcccttc ctcctgaaac
       61 gggatgcgga ggcatacgcc aaggccaacg gcggtcaaac cgccacctac gccgaggcca
      121 tcaaggacgc cgctaacttc accccctgag actgggaagg atagcatcat gagcgcggaa
      181 gccatgccgg taaacgacgg aggccccatc atccgctact tcgaccggga aaagccggag
      241 gaagtcgccg cccccgtccc aaagaccatg cgcctgccgg cctggatcaa cccagaccgc
      301 ctgatcaccg tggcctccgc ctgcctgtcg atcggtttcc tcttcgtcgt ctggtatctg
      361 ggcacgaaat accgggtcac gttcttcatc cgcttccaga acataccgac gccttacgag
      421 gtccttctgc aggccggcga agtctcccgt tccaccaaat tcctgatcaa tgtcggcatg
      481 agcatggagc gcatcctgct gggcttcgcg gtcgccatcg ttgtcggcgt gccattgggt
      541 ctgctgatcg ggcggtatcg ccgggtcaag gaactcgtga tgcccgccgt cgaggtcctg
      601 cggccgattc ccgccatcgc ctgggtgccg atctccatca tgctgtggcc aagcaacgaa
      661 tccagcatca tcttcatcac cttcatcggt gcgtttttcc cgatcctgct gaacacggtg
      721 catggcgtcc atgccatgga tggcgtgctg gtcagggccg ggcagtgcct gggcgcgaat
      781 gagctgcaac ttttctggca cgtcatactg cgcggcgcgc tgtcctacat cttcaccggc
      841 ctggcgatcg gcatgggcgt cgcctgggtc tcgctgatcg ccgcggaaat gatctccggc
      901 cagtacggcg tcggctacta cacctgggaa tcgtactcgc tggtcaacta cccggcgatc
      961 gtgctgggca tgatcaccat cgggatgctg gggctgctgt gcagcggcgc catccgcctc
     1021 gtcggccacc tgacaatgcc gtggctcgcc ttcgcacccg ggagcaaaaa atgagcgaca
     1081 ggggctttat cgacgtccag gacgtcagcg ttcagttcgc caaccgcgaa gtcgtcgtgc
     1141 aggcggtgca gaacgtctcg ctgacggtcc ggcccaacga gttcgtttcg ctgatcggac
     1201 catccggctg tggcaagtcc acactgctga gcatcgtcgc ggggttcgcg aaagcctcca
     1261 acgggcaggc gcaactggat ggcgtgccga tcaccggccc cagttcggag cgcggcgtgg
     1321 tgtttcagca gtattcgctg tttccctggc tgaccgtgcg aaagaacgtc gagttcggcc
     1381 tgagaatgaa cggcgtcgcg cgcagcaagc gtgaatcctc cgcccgcacc ttgttgggac
     1441 tggccggatt gctggcgttc gaaaatcact atcccgacca attgtcaggc ggaatgaaac
     1501 agcgcatcgg catagtccga gcactggcga ccagcccgca ggttctgctg atggatgagc
     1561 cgttcggtgc cttggacacg caaacccgca cggtgatgca ggaaatattg accaatatgt
     1621 ggcagcagtt ccggatatcg gtgctgttcg ttacacatga tatcgaagag gcggtcttcc
     1681 tttcggaccg catctacgtg atgacggcaa ggccggggcg gatcaaggcg gaagtcagag
     1741 tgccgctgcc cagaccccgc accgccgcca tgacggaaac cccaggtttc atggagcttg
     1801 tacacaaatt gaaaggactg atccgagagg agtccattgc ggcaatgggc tccgaactga
     1861 agtcgggcgg cctgaccggc tttggcgtgg acgtcggccc tcagggcgta ggccagcttc
     1921 tgtagcgaac agcgggaaag cgatcccgca gtcgcgacgc atacgaaaca agtcaccacg
     1981 gagtaaaacc agtgacatca gccaaaccga atatcctgtt cttccatgtc gataatctgg
     2041 gcatgggtga actcggctgc tacggcggcg gcaagctgcg cggcgccgac accaggcgga
     2101 tggaccagtt cgccaaggaa ggcaccaagc tgacccacta tgtggtcgaa ccgcaatgca
     2161 ccccgacccg gtcggccctg atgaccggac gcttcccgat ccgttccggc aaccacacga
     2221 tcgccctcgg cggcaacggc ggcgggatcg tcacctggga acgcaccatc gccgaaatcc
     2281 tggcggaggc cggctatgcc aacgcgatct acggcaaatg gcacatcggt gccgaggccg
     2341 gccgctttcc caccgaccac ggcttcgacg aatggtacgg cccgctgcgc acctacgacg
     2401 aatgcatgtg gctggaggac ccgcattacc agccggagcg cgacggtttt tcccacatgc
     2461 atgaaggcgt gaaaggcaag ggcgcctggc cgctgcagga cgagcagttg accatggaga
     2521 ccaagaagac ctgcgacctg gaataccaga accgggcgct gaagttcatg gaaaaatcag
     2581 cccaggccgg caagccgttc tactgctact tcaatcattc gctgatgcat tttccgatgc
     2641 tgccgcgcga cgaattcaag ggcaagagca ccaacggcga ctggggcgac tgcctgctga
     2701 tgctcgacca cgatttcggc gtcctgctcg acaagctgga tgagctgggc atccgcgaca
     2761 acaccatcgt cgtgatgtgc ggcgacaacg gcgccgagga tcatctcgcc ggccgcggca
     2821 ccggcggatt cttcgacggc tcctacttca gttccgccga gggtggcatc cgcacaccgc
     2881 tgctcatccg ttggcccgga aaaatccagg ccggcgttga aagcaacgaa atggtgcacg
     2941 tcaccgacat gttcaccacg ctgctcagct tcgtcggatg cagcgcgccg aaagaccgcc
     3001 tgatcgacgg cgtcgaccag agcgcattct tcctgggcga ccagcaggtc tccaatcgcg
     3061 agtcgtgcat cgtctggctg aaggacgaac tgcatgccgt gaagtggaag gacttcaaga
     3121 tcaacttcaa gcgccagcag cacttccacg atcccgaatt gccgctcggt tttgcccgca
     3181 tcacccacct tcaggaggat cccaaggagc gggagccggt gaaccagcgc tacgtccgct
     3241 ggtgggtcat gcagcacgcg caccgcatcg tgcgggcgtt cgaagacagc gtgaagcaag
     3301 aggaactgat cccgcctggt tcgccgctgg acttcgttcc ccggcaggca gaccggtgac
     3361 actggcgacc acgtcggcgt tgggaagggg gcatagcccc cttccggacc ccggcccgga
     3421 catggtgtgg gtacaagccg gcgacttcct gatgggctcc gaccggttct atcgcgagga
     3481 acgcccggtt catcgccgga atgtcgatgg tttctggatc gatcggcacc tcgtcaccaa
     3541 ccgcgcgttc gcccgtttcg tcgatgcaac gggataccgg acgatggcgg aacaacagcc
     3601 cgatccgcgg ctgtatcccg acgcggcccc ctcgcttctg gcaccaggct cctcagtctt
     3661 ccgcaagccc cagggccccg tttcgctcgg cgattaccgg gcgtggtggg actacgtgcc
     3721 agcggccaac tggcggcatc cggaaggccc cggcagcgac atttccgacc gcatggacca
     3781 tcccgtggtg catgtcgggt acgacgacgc ccgagcctat gccgcctggg cgggcaagtc
     3841 attgccaacc gaggcagaat gggaattcgc cgcacgtggt ggcctcgatg gtgccgctta
     3901 cgcctggggt gacgaaccca tgcccggcgg tcgcatcatg gccaacacct ggcaaggccg
     3961 tttcccctgg gaaaacctcg cggaagacgg ttacgagggc acctcgccgg ccggggcatt
     4021 cccggccaac ggctacggcc tgttcgatat gatcggcaac gtctgggaat ggaccgacag
     4081 tcccgtcaca ccacacgccg ccgccaccca cggctgctgc tcccctggcg acaacgatcc
     4141 acgcaccaca cggcgcatcg tgaagggggg atcacatctg tgcgccccca attactgcct
     4201 gcggttccgg ccggccgcgc gccaggccga acccattgac acctcgacct cccatatcgg
     4261 gtttcgttgc attaggcggc cgagcccatc gtagccccgg cccgccggca tcttgccacg
     4321 cccaccgcca cggcctattc tagaacggac ataccataac gccgtgcccg cgatgtcggc
     4381 tgcaatccaa cccgagggaa acgccatgat ccgcttctat ttccacccaa ccccgaatcc
     4441 cgcgaaggtc gctcttctgc ttgaggaagc cggtctcccc tacgaaacga ttccggtgga
     4501 caccagcaag ggcgagcagc acgcccccgc gtttcgggcg atcaacccga acggcaaggt
     4561 accggcgatc gtcgacaccg ccggtcccgg cggcaaggaa gcccgggtgt tcgactccac
     4621 cgccatcctg ctctatctcg ccgagaagac cgggacattc cttggcacac ccgaagaccg
     4681 ccccgaactg ctctcgtggc tgctcttcat cgcctccgga cttggcccgt tctccggcca
     4741 ggcggtgcat ttccagttcg ccgcgccggg cggcctggaa tacgccgcga accgctatcg
     4801 acgtgaggcg gagcgccact atgaggtgct gaacgatcat ctcgccggac gggaattcat
     4861 cgtcggcgac acctacacga tcgccgacat gtcggcgtgg ggctggctgg acagagccgc
     4921 acgcgtcatg aagggactgg acgatccgct ggccgcttat ccgcatctga aacgtctctt
     4981 ccagatggtc gatgccaggc cggccgcaca gcgggcgcgt gccgtcggca aaggtcacga
     5041 cttcaagaag accaacgacg acgaaaccaa gcgcgccctc ttcccctcga actacccctc
     5101 ggccgcgtag cgacgacggc ggaaacgggc gcgaggcgcg tcggggtgga aaggctacaa
     5161 gacctggccg accgccaatg gcgcgactat cgtgcgcgcg tgccggggac gtgcttcgcg
     5221 gacccggatt tcgccccgcc gcttgccgac gcctacgcat tgcaggacgc cgtcgcgaga
     5281 atacggacat cagcgggcga tcgtatcatt ggttacaagg tcggctgcac cgggccgggc
     5341 accgtgcgcc aattcggcat gcagggacca atccgtggat gtctcttcga aagcgaaatc
     5401 cgaaaatacg acgacagcct ggatttcgac gatttcgcca gcccggcgat cgaaggcgaa
     5461 atggcggtgc ggatcgcgcc ggatggtacg atcgcggcgg cattcccggt catcgaactc
     5521 catcacttcg ttttcagggg atcccgcaag acgctgccgg agctggttgc caacaacggc
     5581 ctcaacgcag gtttcgtcct gccgcatgac gattggctgt cgtcccagac gtatatcgcc
     5641 gaaaaaggca ctttgtcggt ccgcatcaac ggccacaccg tcgcatccgg cgacctttgg
     5701 ccgatgcctg gcggcgccga ggcctccctc gaatggctgc gccggcacct ggcgctcgat
     5761 ctcctacccg gacacgtcat cctgacgggc acgccgctgg ggctctaccc ggttcgccga
     5821 ggcgaccacg tggccgtgtt cgtcaatcac gaaatcggct ccaagtgcca ggtcgcgtag
     5881 tgccctagga ggccgcccga gccacgccgg cgcctacgat gtgtccgtcc gcccgctgca
     5941 gcaggacggc aacgtcctga ccggcgggat agggcacatt caggtggacc ggctgtccgg
     6001 accagggacc gagaatcgac atcgagcgga caatatccgc ctcctccagt gttcggccgc
     6061 tgttttcgcc ccgcccgaca tgggtctggt gcagccggtc atagccgata agcaccagcg
     6121 ttcccgtgcc agctccagcc ccaaccgata ccgtcagccc gccaggcccg cgctcgacct
     6181 ggatctgcgc ggccgtctcg cgggtcagcg ccgcctgccg gaacgcatga tcgaccgccg
     6241 cgccgtcaga cccgaccgcg tcgagccggc catccacgat cagggctggc gtatagacct
     6301 cgggactgat cccaagcgcc acataacggc gctgaagctg tgtcgcggca tcgaaggaga
     6361 acggatcgtg ccaacccaga ttgttccagt aagtcacatg aaacgccagc agtaacaggt
     6421 ccgggtgggt ttttgccagc tcggcgagct tcgcgtccgc cggcggacag gatgaacagc
     6481 cttccgacgt gaacaattcg cccaccaccg gccgggaagc cggctgcgcc accaccaggg
     6541 acggaatcag cgttccgatc gcgaccgcca gccaaacgcg catgtcattc tcccgaaatt
     6601 ggcgcggcct cgccgccatc attctcgaag tctattcgga gaaaaacggc accggttaca
     6661 gcaaccccac attccacggg ctagccattc tggtgggtcc gctctacaac gttcgcttcc
     6721 tgttgcctct ctcacggagg acgacaaggt cagccggctc aattcatgtc atccgaggac
     6781 cggatttgtg gcgataccgc atttctcgca tcaacgcgca cttggcggtg taaccgcggc
     6841 aggcgcggcg ccgaatttgc cgcggggacc ggtagcggcg gtgcacgtcg gcggcagcga
     6901 tctgccgcgc actaaaccgt tccgctatgg tcccgaaagc aggcgctgac gtcggcgaat
     6961 ccgccggcag gaattgggac acgatgatgg cggccgctca ggccggggac gcgcatgcgt
     7021 acaggatcct tctcgctgaa ctggcatcat ggctgcgccg gtattaccgt ccgcgccttc
     7081 ctcctgcgat gaccgaggac gcggtgcagg acgtccttct ggcggtccac gaaaagcgtc
     7141 acacctacga tccgtcgcgc cctttcgggc catggctcgc cgggatcgca cgttacaaat
     7201 ggatcgaccg gctgcgcgca ctcaagatgc aggcaaccga acccctcgat gacaatatcc
     7261 gcgtgcccga tcacgaagag gccgtcgtgg ccggttccac cttccagcat ctgctcgatt
     7321 ccctgaaacc cgcccaggtc gaggccatcc gcctcgtcaa gctggagggc tacagcgtcg
     7381 aggaagcgtc gcgtgcgacc ggccagtccg tgtccctcat caaggtgaac atccatcgcg
     7441 gcctcaagcg cctcgcgtcg atcattcgga agacagacga tgcgcactga attcctggtc
     7501 gagcgcctca gccaaaatct acgccccgtc aggccacgca gcctggtccg cgatgcgatg
     7561 cttctgcttg cactcggcgc gatcgagatc gcggtctatc tcggcctggg attcatgcgc
     7621 cccgatatgc aaacggccat ggacgcgccg tccttctggt ggaaactcac aagcctcggc
     7681 ctcatcgctg cgctcggcgc cggggttgcc ctcctgtcgg tcgatccgtc ccgctccccg
     7741 cgccccggac tgcgtttcat gctcgtttgc attgccgcag tcttcgtcag cggatgggcc
     7801 atcgacgcaa gcggtgatgg attcgcacac cttctctccc
//
LOCUS       DATAVD010000494         5795 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2279412, whole genome shotgun sequence.
ACCESSION   DATAVD010000494 DATAVD010000000
VERSION     DATAVD010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5795
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2279412"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..338)
                     /locus_tag="VHX39_09185"
     CDS             complement(<1..338)
                     /locus_tag="VHX39_09185"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX3991330.1"
                     /translation="MTEHDIRHALNRHWAASDVNDFEVEHDIYREDAVLEYPQSGERI
                     RGRRNIQASRTVQPSSKRFTVRRVMGSGDLWVSEFIITYDGQPSYTVSIMEFQDGKVA
                     RETQYFGDPFA"
     gene            617..934
                     /locus_tag="VHX39_09190"
     CDS             617..934
                     /locus_tag="VHX39_09190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991331.1"
                     /translation="MWTIQSRALTMWRQLPWVARFPVAATAATVTLLALSWVLAGFGW
                     LKLDGTATVGAVLGIVFTIALAVALMTLIFYSNRSGMDDLVANAGEPEAEKAVAVVDR
                     QTR"
     gene            complement(941..1630)
                     /locus_tag="VHX39_09195"
     CDS             complement(941..1630)
                     /locus_tag="VHX39_09195"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF002003.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003905 - alkylbase DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HEX3991332.1"
                     /translation="MACRGVARPGGDGQSRAVTQSRRLIDISARPSATRPLDRAELPV
                     DTDQLARFLIGKMVVRTLAEGVVAGRIVETEAYVIGDPAGHAWRGMTPRNRTLFLQRG
                     HAYVYLAYGISFMLNVSSETPGVGAGVLIRALEPTVGIPIMQRNRGIEQVRDLARGPG
                     RLCVALGIDRGLDGMDLCQAGPLWLGTDGQAADEFGQSKRIGITRAADSLLRFYVRGN
                     RFVSGPRALNS"
     gene            complement(1558..2103)
                     /locus_tag="VHX39_09200"
     CDS             complement(1558..2103)
                     /locus_tag="VHX39_09200"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3991333.1"
                     /translation="MINLSSIGHVLLRVTDEEASKRFYRDVLGFRIAEQDPEHGGVFM
                     TLGDGFHTIDIAQHPTPQDASKPRHGQLGLAHIAFKVASYEALRDAYAHLLNNGVEIQ
                     RAADHVCQRSIYFNDPDGNGLEIYYEMPRALHLFPNGRGDEDEALPLTRAGDQLPQWL
                     VEAWPGPEAMAKVERLRSQGG"
     gene            complement(2125..2646)
                     /gene="ssb"
                     /locus_tag="VHX39_09205"
     CDS             complement(2125..2646)
                     /gene="ssb"
                     /locus_tag="VHX39_09205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010507163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEX3991334.1"
                     /translation="MAGSVNKVILVGNLGRDPEVRNTQDGSKIVNLALATSETWNDRQ
                     SGERKEKTEWHRVVIFNDRVADVAEKYLKKGAKIYVEGALQTRKWTDQAGQERYSTEV
                     VIGRFNGQLTMLDGRSGGDSGGFAEPPMGGAAPARERTPAAARPAAAARSGGGAPSWD
                     APRGGDLDDEIPF"
     gene            2790..5726
                     /gene="uvrA"
                     /locus_tag="VHX39_09210"
     CDS             2790..5726
                     /gene="uvrA"
                     /locus_tag="VHX39_09210"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEX3991335.1"
                     /translation="MDGSIIAPQEHGTARTGANAIAPAARGNNIVVRGAREHNLKNID
                     VSIPRDSLTVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLELMGKPDVDSI
                     EGLSPAISIEQKTTSRNPRSTVGTVTEIHDYMRLLWARVGVPYSPATGLPIEAQTVSQ
                     MVDRVLAMAEGTRLLLLAPVVRDRKGEYRKELAELQRRGFTRVKVDGKLYEIGEVPAL
                     NRKIRHEIEAVVDRIVVREGVSARLADSFETALALSEGVVFAENADSAERTVFSSKFA
                     CPVSGFSIEEIEPRLFSFNSPHGACPACDGLGVENFFDPDLVVPDERLGLADGAVAPW
                     SGAQSPYYDQTLQSLARHFGVTTRTPWRDLPVAFHAAVLTGTGEVPVSFTYKDGTRSY
                     NVTKPFEGVLHNLARRLRETDSAWVREELSRYQSEKPCVTCGGARLKPEALSVRVGGS
                     NIAEASELSIRRALDWFDSVLPTLTPQRAEIAGRILREIHDRLRFLVDVGLDYLTLAR
                     GSASLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNERLLGTLRRLRDLGNT
                     VLVVEHDEDAIRAADHLIDIGPKAGVDGGHVIAEGTPAEVSANPKSLTGDYLSGRRRI
                     EVPPMRRPVQKDRVLRVIGARANNLRRIDAAFPLGTFTCVTGVSGGGKSTLVIDTLYK
                     AAARRLMGAGESPSPHDRIEGLDQLDKIIDIDQSPIGRTPRSNPATYTDLFAPIRDWF
                     AELPESRARGYKPGRFSFNVKGGRCEACQGDGLLKIEMHFLPDVYVTCDTCKGRRYNR
                     ETLEIKFRDKSIAEVLAMTVDEAVPYFSAQTRIHDRLKILQQVGLGYIALGQQATTLS
                     GGEAQRIKLSKELARRATGRTLYILDEPTTGLHFEDVRKLLEVLHALVDQGNTVIVIE
                     HNLEVIKTADWILDLGPEGGDGGGLIVAEGTPEDIAANPASHTVQFLAALLERTAPPK
                     RARRRA"
BASE COUNT         1048 a         1809 c         1834 g         1104 t
ORIGIN      
        1 gcaaaagggt cgccgaagta ttgagtttcg cgggccacct tgccgtcctg aaactccatg
       61 atgctgaccg tataggatgg ctgtccgtca taagtgatga taaattccga gacccacagg
      121 tcaccactcc ccatgacccg cctcaccgta aacctcttgc tactgggctg taccgtgcga
      181 gaggcttgaa tattgcgccg gccacgaatt cgctcgcccg attgcgggta ctcgagcact
      241 gcgtcctctc ggtagatgtc gtgctcaacc tcgaagtcgt tcacgtccga ggcagcccag
      301 tggcgattga gtgcgtggcg aatgtcgtgc tctgtcatcg tgcgactccc gttccggatc
      361 atcaaagcgc ggtctcactc catcgggcct acctcgactt gtggtccgac ctttgcgcca
      421 ggcggcgcgc ccggtctttt tggttcgcat agccgattgt caaatcgccg tatcgagtgc
      481 cgccggagct cgcgggccag gaattcgaca cggcatcggg cttttgcgaa acggtcaggg
      541 tgttctggga agcccttgtt cccacgtcgc ggtacacacc caactgccga cccgccataa
      601 cgaggaaaca acgaaaatgt ggaccattca atcgagggcg ctgacgatgt ggcggcaact
      661 gccatgggtg gcacggttcc cggtcgccgc cacggctgcc accgtgacgc tgctcgccct
      721 gagttgggtt ttggcgggat ttggttggct caagctcgac ggcacggcaa ccgtgggcgc
      781 ggtattgggc attgtgttca cgatcgctct ggcagtcgcg ctgatgaccc tgatatttta
      841 cagtaaccgc agcgggatgg acgacctcgt cgcgaatgcc ggcgaaccgg aggccgagaa
      901 agcggttgcc gtggtcgaca ggcagacccg gtaaccggga ctaactgttg agtgcccgcg
      961 gaccgctgac gaaccgattg ccccgaacat agaaccgcag caggctgtcg gcggcgcggg
     1021 taatgccgat ccgtttgctc tgcccgaatt cgtccgccgc ctgcccgtcg gttccgagcc
     1081 acagcggacc agcctgacac aggtccatcc cgtccaaccc tcgatcgatc cccaacgcca
     1141 cgcacaatcg tcctgggcct cgcgccaggt ctctcacctg ctcgatgccg cgatttcgtt
     1201 gcatgatcgg gatgccgacg gtcggttcga gcgccctgat caagacgccg gcaccaacgc
     1261 ccggggtctc gctcgaaacg ttcagcatga acgagatgcc ataggcgaga tagacgtagg
     1321 cgtgcccgcg ctggaggaaa agcgttcggt tgcggggggt catgccgcgc caggcgtgac
     1381 cggcggggtc gccgatgaca taggcttcgg tctcgacgat ccggccggcc accacgcctt
     1441 cggccaacgt tcgcacgacc attttgccga tcagaaatcg agccaattgg tcggtatcga
     1501 caggcagctc tgcccgatcc aaagggcgtg tcgcgctggg acgcgccgaa atatcaatca
     1561 gccgccttga ctgcgtaacc gctcgacttt ggccatcgcc tccgggccgg gccacgcctc
     1621 gacaagccac tggggcagtt ggtcgcccgc gcgggtcaac ggcagcgctt cgtcctcgtc
     1681 gccccggcca ttcgggaaca ggtgcagcgc cctcggcatc tcgtaataga tctccaggcc
     1741 gttgccgtcg ggatcgttga aatagatgct gcgctggcag acgtgatcgg cggcgcgctg
     1801 gatttcgacg ccgttgttca gcaggtgggc gtaggcgtcg cgcaatgcct catagctggc
     1861 gaccttgaac gcgatgtgcg cgagcccgag ctgaccgtgc cgcggcttcg acgcgtcctg
     1921 tggcgtggga tgctgtgcga tgtcgatcgt gtggaagcca tcgcccaacg tcatgaaaac
     1981 accgccgtgc tccggatcct gctcggcaat gcgaaacccc agcacgtcgc ggtagaaccg
     2041 ctttgaggct tcctcgtcgg tgacccgcaa caggacgtga ccgatactgc tcaggttgat
     2101 catcttgggc tcccctggtt ttccttaaaa cggaatttcg tcgtccagat cgccgccgcg
     2161 cggtgcatcc cacgagggcg ctccgccgcc gctgcgagcg gccgctgccg gacgcgctgc
     2221 cgcaggtgtc cgttcccgtg ccggagcggc acctcccatc ggaggctcgg caaagccccc
     2281 cgagtcgccg ccgctgcgcc cgtccagcat ggtcagctga ccgttgaagc ggccgatcac
     2341 gacctcggtc gaatagcgtt cctgaccggc ctgatcggtc catttgcggg tttgcagcgc
     2401 gccctcgacg taaatcttgg cgcccttttt cagatacttt tcggcgacgt cggcgacccg
     2461 gtcgttgaag atcacgaccc gatgccactc ggttttttcc ttgcgctcgc cgctctggcg
     2521 gtcattccag gtttcgctgg tcgccagagc aagattgacg atcttgctgc catcctgggt
     2581 attgcgaacc tcggggtcgc ggcccaggtt accgacgagg atcactttgt tgacgctgcc
     2641 agccattgct cggctccctt catgacggat agtgccttag ggtaacggac aggggttaac
     2701 aacccttcca cgccaccccg gaatttgcca tagtgcccgg gaacatccat agaacaaatc
     2761 gaatcgccgc aacaggggta tcaacactga tggacggctc cattatcgcg ccgcaggagc
     2821 atgggaccgc ccggaccggg gcaaacgcga tcgcgccggc ggcgcgcggg aacaatatcg
     2881 tcgtgcgggg cgcgcgcgag cataacctga agaacatcga cgtctcgatc ccgcgcgatt
     2941 cgctgacggt gatcaccggg ctgtccggtt cgggcaagtc gtcgttggcg ttcgacacca
     3001 tctatgccga gggccagcgc cgttacgtcg agtcgctgtc cgcttacgcc cgccagttcc
     3061 tggagttgat gggcaagccg gacgtggaca gtatcgaggg cctgtcgccg gccatctcga
     3121 tcgagcagaa gacgacgtcg agaaacccac gctccacggt cggcacagtg accgaaattc
     3181 acgactatat gcggctgctg tgggcgcggg tgggcgtgcc ctattcgccc gccaccggcc
     3241 tgccgatcga ggcacagacc gtctcgcaaa tggtcgaccg cgtcctggcg atggcggaag
     3301 ggacgcggtt gctgttgctg gcgccggtgg tgcgcgaccg caagggcgaa taccgtaagg
     3361 agttggccga actgcaacgc cgcggtttta cccgcgtgaa agtcgacggc aagctgtacg
     3421 aaatcggcga ggtaccggcg ctgaaccgca agatccgtca cgagatcgag gcggtggtgg
     3481 accgcatcgt ggtgcgcgaa ggcgtgtcgg cgcggttggc cgatagtttc gagaccgcac
     3541 tggcgctgtc ggaaggcgtg gtgtttgcgg aaaacgccga ctctgccgaa cgcacggtat
     3601 tctcgtcgaa gtttgcctgt ccggtctcgg gattctcaat cgaggagatc gagccgcggc
     3661 tgttcagctt caattccccg catggtgcct gtcccgcctg cgacggactg ggcgtggaga
     3721 atttcttcga tcccgatctg gttgtgccgg atgaacggct tggtctggcc gacggcgcgg
     3781 tcgctccgtg gtccggtgca caaagcccgt attatgatca gacattgcag agtctggcgc
     3841 ggcatttcgg ggtcaccacg aggacgccgt ggcgcgatct tccggtcgcg tttcacgctg
     3901 ccgtgctgac cggaaccggc gaggtcccgg tgtctttcac ttacaaagac ggcacccggt
     3961 cgtataacgt taccaaaccg ttcgagggcg tgctgcacaa cctggcacgc cggttgcgcg
     4021 aaaccgacag tgcctgggtg cgtgaggaac tgtcgcgcta ccaatccgaa aaaccttgtg
     4081 tcacctgcgg tggtgcgcgc ctgaagcccg aggctttgtc ggtgcgcgtc ggcgggtcga
     4141 acatcgccga ggcctcagaa ctgtcgatcc gtcgcgcgct cgactggttc gacagcgtgc
     4201 tgccgaccct gactccgcaa cgcgccgaga tcgccggccg gattctgcgc gaaatccacg
     4261 accggttgcg ctttctggtc gatgtcggcc tggattatct gaccctggca cgtggttcgg
     4321 cgagcctgtc aggcggtgag tcgcaacgga tccgcctcgc cagccagatc ggttcggggc
     4381 tgaccggtgt gctgtacgtg ctggacgaac cctcgatcgg attgcaccag cgcgacaacg
     4441 aacgtctgtt gggcacgctg cgccggttgc gcgatctcgg caataccgtt ctggtggtgg
     4501 aacatgacga ggatgccatc cgcgctgccg atcatttgat cgatatcggt cccaaggcgg
     4561 gggtggatgg cggacatgtc attgccgagg gcacacccgc cgaagtttcg gcaaatccaa
     4621 agtcgctgac cggcgattat ttgtcgggac ggcggcgcat tgaagtcccc cccatgcggc
     4681 gaccggtgca gaaggatcgc gttctgcgcg tgatcggtgc ccgcgccaac aacctcaggc
     4741 gcatcgatgc cgcctttcca ctgggcactt tcacttgcgt gaccggtgta tcgggcggcg
     4801 gcaaatccac cctggtgatc gatacgttat acaaggcagc cgcgcgccgg ctgatggggg
     4861 ccggcgagtc gccctcgccg catgaccgga tcgagggatt ggaccagctc gacaagatca
     4921 tcgacatcga tcagtcgccg attggccgga cacctcgctc caacccggcg acctataccg
     4981 atctgtttgc gccgatccgc gattggtttg ccgagctgcc ggaatctcga gcccgcggct
     5041 acaagccggg ccggttttcg ttcaacgtca aaggcgggcg gtgcgaggcg tgccagggcg
     5101 atggactgct gaagatcgaa atgcacttcc taccggatgt ctatgtcacc tgcgatacat
     5161 gcaagggccg ccgctataat cgcgagacat tggaaatcaa attccgcgat aaatcgatcg
     5221 ccgaagtgtt ggcgatgacg gtggacgagg cggtgccgta cttcagcgcg caaacccgca
     5281 tccatgaccg gctgaagatt ctgcaacagg tcgggctggg ttatatcgcg ttaggccaac
     5341 aggcaacgac gctgtccggc ggtgaggcgc agcgcatcaa actgtcaaag gaactggcac
     5401 gccgagccac cggccgcacg ctgtatatcc tcgacgaacc tacgacgggc ctgcatttcg
     5461 aggacgtgcg caagctgctg gaagtgctgc acgcgctggt cgatcagggc aacaccgtga
     5521 tcgtgatcga gcacaatctt gaagtcatta aaaccgccga ctggatcctc gatctcgggc
     5581 cggagggcgg cgacggcggc ggtctgattg tcgccgaggg cacgccggaa gacatcgccg
     5641 ccaatcccgc cagtcacacc gtacagttcc tggcggcgtt gctggaacgg acggcgccac
     5701 cgaaacgagc tcggcggcgg gcgtaacgat acgcccgccg ccgggttcag cctgctactt
     5761 caggaaccga ccgaagaacg ccgccgtcgg caggt
//
LOCUS       DATAVD010000495         1856 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_794444, whole genome shotgun sequence.
ACCESSION   DATAVD010000495 DATAVD010000000
VERSION     DATAVD010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1856
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_794444"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..863)
                     /locus_tag="VHX39_09215"
     CDS             complement(<1..863)
                     /locus_tag="VHX39_09215"
                     /inference="COORDINATES: protein motif:HMM:NF040244.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HEX3991336.1"
                     /translation="MTFESLPQIAEDAIRQAIALGATDAECTISEGDEFSANVRMGEL
                     ETLKEAGSRGAGLRVLRGRRMGASYTSDLTPEGIRQMVRSAMDLAELTTEDPHTGLPA
                     TEDLGKVEGDLKLFSDETAGLPTEERISLAKRAEAAALAVDPRITNSEGASFDSSVNG
                     RVFANSRGFVGSYRTSYCSVSAVPVATQNGSMERDYWFTIARNYKGLEDPETVGRKAA
                     ERALRRLGAVKVETQRAPVVFEPRLARSLLGHIFEAVEGRAIYRKASFLAGKLGEKIA
                     DERITLIDDGT"
     gene            complement(860..>1856)
                     /locus_tag="VHX39_09220"
     CDS             complement(860..>1856)
                     /locus_tag="VHX39_09220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HEX3991337.1"
                     /translation="YDPRVFQVQVTYADSLRHVMVATSDGVLNFDRQPMARLSVLVLA
                     RSGNGVPQQAHSGGGGRYELDFFQKERTPEYFAGEAARQAIMQLDAVEAPAGEQVVVL
                     GPGWPGVLLHEAVGHGLEADFNRKGVSAFSGRIGQQVASPLCTVVDDGTIGGRRGSLN
                     VDDEGNETQRNVLIENGILRGYLQDKLSSRITKAAATGNGRRESYEHIPMPRMTNTFM
                     LAGESDPADIIKSVPRGLYCANFAGGQVDITSGNFVFSASESYLIEDGKLTRPVRNAT
                     LIGNGPEAMKYVSMVGNDLKLDEGVGVCGKEGQSVPVGVGIPTVRIDRMTVGGTA"
BASE COUNT          338 a          653 c          504 g          361 t
ORIGIN      
        1 atcgtgccgt cgtcgatcag cgtaattctc tcgtccgcga tcttctcgcc cagcttgccc
       61 gcgagaaacg acgccttccg gtaaatcgca cggccctcca ccgcctcgaa gatgtgtccc
      121 agcagcgaac gggcaagccg aggttcgaag accaccggcg cccgctgcgt ttcaaccttg
      181 acggcgccga gccgtcgcag agcacgttcg gcggccttac gtcccaccgt ctccggatct
      241 tccagaccct tgtaattgcg cgcgatcgta aaccagtaat cgcgctccat actgccgttc
      301 tgcgtggcca ccggcacggc cgatacggaa caatagctgg tgcggtatga accaacaaat
      361 cctcgcgaat tggcgaacac gcgcccgttc acgctcgaat cgaacgacgc gccctccgag
      421 ttggtaatgc gcgggtccac cgccagcgcc gcggcctcgg cgcgcttcgc cagcgagatc
      481 cgttcttcgg tgggaagtcc ggcagtctcg tccgagaaaa gcttgagatc gccttcgacc
      541 tttcccagat cttcagtcgc cggcagtccg gtgtgtggat cttccgtagt cagttcagcc
      601 agatccatgg ccgaacgcac catctgccgg attccctcag gcgtgaggtc cgacgtatag
      661 gacgcgccca tgcgcctccc cctcagtacg cgtaatccag ctccgcgtga accggcttct
      721 ttcaacgtct ccagttcgcc catgcgcaca ttcgcggaaa actcgtcgcc ttccgaaatt
      781 gtgcactcgg cgtctgttgc cccgagagcg atcgcctgtc gaatcgcatc ctcggcaatc
      841 tgaggaagcg actcaaacgt caagcggttc cccccacggt catgcggtcg atccggacgg
      901 tcggaatccc cacgcccacg ggaacgctct ggccctcttt accgcacacg ccgactcctt
      961 cgtccagctt caaatcgttg cccaccatgc tcacgtattt catggcctcg gggccattgc
     1021 cgatcagcgt cgcattgcgc accggccgcg tgagtttgcc gtcttcgatc agataactct
     1081 cggaagccga gaacacgaaa ttaccgctgg tgatgtccac ctgtccgccc gcgaagttgg
     1141 cgcagtaaag gccgcgcggc accgatttga taatgtccgc cggatcgctc tcgccagcga
     1201 gcatgaacgt attggtcatg cgcggcatcg ggatgtgctc atagctctcg cggcgcccgt
     1261 tcccggtggc cgccgctttc gtgatgcggc tcgaaagctt gtcttgcaaa taaccgcgca
     1321 gaatgccgtt ctcgatcagc acgttacgct gtgtttcgtt gccctcgtcg tccacattaa
     1381 gagatccgcg ccggccgccg attgttccat cgtcgaccac cgtgcaaagc ggactggcca
     1441 cctgctggcc gatgcgccca ctgaacgccg aaacgccttt gcggttgaaa tccgcttcga
     1501 gtccgtgccc caccgcctca tgcagcagca cgccgggcca ccctggaccc agcacgacta
     1561 cctgctcgcc ggccggagct tccaccgcat ccagttgcat aatcgcctgc cgcgcggcct
     1621 ctccggcgaa gtattccggc gtgcgctcct tctggaaaaa gtcgagctca taacggccgc
     1681 cgccacctga atgggcctgc tgcgggacgc cattgcccga acgcgccagc accagcacgc
     1741 ttaaccgcgc catgggctga cggtcgaagt tcagcacgcc atcgctcgtc gccaccatca
     1801 cgtgccgcag gctgtcggcg taagtaacct gaacctggaa aacccgcggg tcgtac
//
LOCUS       DATAVD010000496         5753 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_605028, whole genome shotgun sequence.
ACCESSION   DATAVD010000496 DATAVD010000000
VERSION     DATAVD010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5753
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_605028"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(194..1351)
                     /locus_tag="VHX39_09225"
     CDS             complement(194..1351)
                     /locus_tag="VHX39_09225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3991338.1"
                     /translation="MTSNQFDLDSITDDQFRTHVRGWIEANYPAEIRNPPSRLHFKDN
                     KPWYIKLAQQGWLAPNWPREFGGMGISASKQLIFLEEKERYGCARLNDMGMTMIGPLL
                     IKFGRPEQQQYFLPKILAGEHIWCQGYSEPNAGSDLASLRTEAVLDGDHWVVNGQKIW
                     TSLAMDANWIFLLVRTDKQAKKQDGISFLLVPMDTPGITVRPITNIDMADEFCETFFD
                     NVRVPKDNLVGQINKGWTMAKALLGFERIGSGSPRQSAYALKRLKLLAERMGVWEDDQ
                     FQDRYTRLRLDLEDHKDLYETFVEKVRRGETIGPDVSMLKINQTELFQRITETMLEVA
                     GEYGAGLGPMEGNRDLNPAGLFLQSRPSSIYAGSNEIQRNILAKNVLELPG"
     gene            complement(1436..3544)
                     /locus_tag="VHX39_09230"
     CDS             complement(1436..3544)
                     /locus_tag="VHX39_09230"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEX3991339.1"
                     /translation="MSESPVVRLEKDGEIGVIIVNYPPVNALGPGVSEGIIDSLNKAN
                     ADPSIKAMVLMGDGRSFIAGADIRGFGTGRKRLAIGERTYDVMDASKKPVVAAIHGYA
                     LGGGLENAMGCHYRIAVPSAKVGLPEVLIGILPGGGGTQRLPRLAGVTTALEMITSGR
                     HVPAPEAAKLGILDDVLPEGANLREAAVAYARKIADVRPLPRVRDKSATAEPGVFDAI
                     RKSIARKARNQKAPYNCIAAVEAACTLSFDEGIRREAELFAELETADEAKALRYAFFA
                     EREVAKLPDLPSAVAPADFTAPAVIGAGTMGGGIAMSFADFGYEVKIMDATQEALDRG
                     MERIRNNYATSVKRGSLAEGEMQRRLARIHPVAGYEDIADCDVVVEAVFERMDVKKPI
                     FAKLDEVMKPGAFLFSNTSALDMDDLASVTKRPEYVAGTHFFSPANVMKLLEVVRPSK
                     ASPETLLTAMAMGRRIGKISAMAGNTDGFVANRSRAPFNSEMVILLEEGCLPEQVDKV
                     MVDFGYPMGPFAVGDLAGLDIGAEGRKRRAAANPNYRKLPIADKLVEMGRYGQKTSAG
                     WYRYESGDRTPHPDPEVAAIVKSVAAEMGVPQKTFTDTEILQRLLFSSVNEACRILEE
                     GKAYRASDVDVMWLHGFGFPRYRGGLMYWADGIGVKNVYAQIASWHQQYGERWAPSRL
                     LRELAESNTPFREAKPAPFV"
     gene            complement(3615..4466)
                     /locus_tag="VHX39_09235"
     CDS             complement(3615..4466)
                     /locus_tag="VHX39_09235"
                     /inference="COORDINATES: protein motif:HMM:NF037627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX3991340.1"
                     /translation="MRSSTVATKSTPNELRVLLRHWRDVRGRSQLDLSMDSGVSQRHI
                     SFIESGRSVPSRGKLLDIAEALDIPLRERNTLLLAAGYAPIYSESAWDAPDMQRVTGA
                     LRRMLRQHEPFPAMVMDRYWNVLLTNEAAPRFFNCFVELGARPTPRNLLHLMFDPAGV
                     RPFIANWDDAAKSLLARVYRESVGRVVDEKTKQLLAELLAYPDVKAEWQAPEHTGAMP
                     VIPLGFIKDGVVLNYFSLITTVGTPQTAAAQELRVECMFPADDATERHHLELMADDAC
                     TRFPTRH"
     gene            complement(4549..5103)
                     /locus_tag="VHX39_09240"
     CDS             complement(4549..5103)
                     /locus_tag="VHX39_09240"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX3991341.1"
                     /translation="MMQDFPVHTIASAPEQSRPALEALQAAFGMVPNIAGAMATSPVL
                     INSLVGLFQRVHGGSFSEAQIQVLLLTNAVTNACEWAVAFHTALAFQAGVDATDVQAI
                     RVGRAPVDGQQAALSVLAKTLIEKRGRLDDQDVDRFIGAGFGKDHLLEVIAVVAASTI
                     TNYTGSVTKPPVEGPFQSHIWTAQ"
     gene            5288..>5753
                     /locus_tag="VHX39_09245"
     CDS             5288..>5753
                     /locus_tag="VHX39_09245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019091175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX3991342.1"
                     /translation="MSFPPVHPVLDAALLARGYLEPTEVQSAVLQPDAAGRDLLVSAR
                     TGSGKTVAFGLAAASTLIADGDMPAPGAPIALVIAPTRELALQVQTELAWLYARARIA
                     SCVGGMDIRREARALHAGCHIVVGTPGRLGDHLRRGNLDLSALKVVVLDEADE"
BASE COUNT         1079 a         1926 c         1638 g         1110 t
ORIGIN      
        1 atttgaacgg ttcagcctgc gcggcgacag acgacaggcc aacagaagcg agcaacccga
       61 ccgaagccca aaatccacga ttcataaaat agtctcccaa acacgctcac gcgccgtccc
      121 gtcgcagact tatgctgctt gggtcgtagc gtgaccacgt gaatgggggc cgtcaaggac
      181 gaatacgccg tcctcagccc ggcagttcga ggacgttctt cgccaggatg ttgcgctgaa
      241 tctcgttcga ccccgcatag atcgatgaag gacgcgactg caggaacagg ccggcggggt
      301 taaggtcccg gttgccctcc atcggaccca gcccggcacc gtactccccc gccacctcca
      361 gcatcgtctc cgtaatccgc tgaaaaagct cggtttgatt gatcttcagc atcgatacat
      421 ccggaccgat ggtctcgccg cggcgcacct tctccacgaa ggtctcatag aggtccttat
      481 gatcctccag gtccaaccgc agccgcgtat agcgatcctg gaactgatcg tcctcccaaa
      541 cgcccatccg ttcggcgagc agcttcagcc gcttcagcgc ataggccgac tgccgggggg
      601 agccggagcc gatccgctca aaccccagca gcgccttggc catcgtccag cccttgttga
      661 tctggccaac gaggttatcc ttggggacgc ggacattgtc gaagaaagtc tcacagaact
      721 catccgccat atcgatgttg gtgatcggac ggacagtgat cccgggcgtg tccatcggca
      781 ccagcaggaa gctgatgcca tcctgctttt tcgcctgctt gtcggtgcgc acgaggagaa
      841 aaatccagtt cgcgtccatc gccagcgaag tccagatctt ttgcccgttg accacccaat
      901 ggtcgccgtc gagcactgcc tccgtgcgca gcgacgccag gtcggacccg gcattgggct
      961 cgctgtagcc ctggcaccag atatgttccc ccgccagtat cttcggcagg aaatactgct
     1021 gctgctccgg ccggccgaat tttatcaaca gcggcccaat catcgtcatg cccatgtcgt
     1081 tcaagcgggc acagccgtaa cgttcttttt cttccaggaa gatcagttgc ttgctggccg
     1141 agatccccat gccgccgaat tccctaggcc agttcggggc aagccagccc tgctgcgcca
     1201 gcttgatgta ccagggcttg ttgtccttga aatgcagccg cgacggcgga ttgcggattt
     1261 ccgccgggta attcgcctct atccagccgc gcacatgcgt ccggaactgg tcgtcggtga
     1321 tggagtctag atcgaattga ttagaggtca tggcagtcat ccgtggggtc cctggggtcg
     1381 tcagcggttc gcctgagaag acagccaagc acagccgttc gtcgacgacc atatcttata
     1441 caaacggggc aggtttggct tcgcggaacg gcgtattgct ctccgccaac tcgcgcaaca
     1501 atcgcgacgg cgcccaacgt tcgccatact gctgatgcca cgacgcgatc tgcgcataga
     1561 cattcttcac gccgatcccg tccgcccaat acatcaggcc gccgcgatac cgcgggaaac
     1621 cgaacccgtg caaccacatc acatcgacgt cgctcgctct gtaggccttc ccttcctcca
     1681 aaatgcggca agcctcattg actgacgaga acagcagccg ctgcaggatt tcggtgtcgg
     1741 tgaaggtctt ctgcgggacg cccatctcag cggcgaccga tttgacgatg gcggcaactt
     1801 cgggatcggg atgcggcgtg cggtcgccgc tctcataacg ataccagcca gcactggtct
     1861 tctgcccgta acggcccatc tcgaccagtt tgtcggcgat cggcagcttt cgatagttgg
     1921 gattggccgc tgcccgccgt ttgcgtcctt ccgcgccgat atccagcccg gccaagtcac
     1981 ccaccgcgaa cgggcccatc ggatagccga aatcgaccat caccttgtcc acctgctccg
     2041 gcagacagcc ttcctccagc agaatcacca tctcgctgtt gaacggtgcg cgagaccggt
     2101 tggcaacgaa accatccgtg ttgcccgcca tcgccgagat cttgccgatc cgccgcccca
     2161 tcgccatcgc ggtcagcaat gtttccggtg acgccttcga cggccgcacc acctccagca
     2221 gcttcatcac gttggccggc gagaagaaat gcgtccctgc cacgtattct ggccgcttcg
     2281 tcaccgaagc cagatcatcc atatccagcg ccgaggtgtt ggagaacagg aacgcacccg
     2341 gcttcatcac ctcatcgagt ttcgcaaaaa tcggcttctt cacgtccatc cgctcgaaca
     2401 ccgcctcgac cacaacatcg cagtcggcga tgtcctcgta accggccacg ggatggatgc
     2461 gcgccaaccg gcgctgcatc tcgccttccg ccaggctgcc gcgcttgacc gaggtcgcat
     2521 agttgttgcg tattcgttcc attccgcgat ccagcgcttc ttgcgtcgcg tccatgatct
     2581 tcacctcgta gccgaagtcg gcgaacgaca tggcgatccc gccgcccatt gttccggcac
     2641 cgatcacggc cggcgccgta aagtcggctg gtgcgaccgc cgagggcaga tcgggcagct
     2701 tcgccacctc ccgttcagcg aagaacgcat agcgcagcgc cttcgcctca tcggcggtct
     2761 ccagttccgc aaaaagctcg gcctcgcgcc gaatgccttc gtcgaatgac agggtgcagg
     2821 ctgcttcgac cgcggcaatg cagttgtacg gtgccttttg gttgcgcgcc ttgcgggcga
     2881 tcgatttgcg gatcgcatca aagacgccgg gctccgcggt ggcgctcttg tctcgcaccc
     2941 gcggcagagg ccggacatcg gcgatcttgc gcgcataggc gaccgctgct tcccggaggt
     3001 tggcaccctc cggcagcacg tcatcgagga tgcccagctt cgccgcttcc ggcgccggca
     3061 cgtgccgccc tgaggtgatc atctccagcg ccgtcgttac cccggccagg cgaggcagcc
     3121 gctgggtccc gccgccacct ggcagaatac cgatcagcac ctccggcagc cccactttcg
     3181 cggacggaac tgcgatgcgg taatggcagc ccatggcgtt ttcgagcccg ccgcccaggg
     3241 cgtagccatg gatcgccgcc accaccggtt ttttgctggc atccatcacg tcataggtgc
     3301 gttccccgat cgccaaacgc ttccggccgg ttccgaaccc gcgaatatcc gccccggcga
     3361 tgaaactgcg gccatcgccc atcagcacca tcgccttgat cgacgggtcc gcgttggcct
     3421 tgttcaggga gtcgataatc ccctcggaca cccccggccc aagcgcgttg accggcggat
     3481 agttgacgat gatgacgcca atttcgccgt ctttttccag acggacgact ggtgactcgg
     3541 acatggggcg cttttcctct cgctactggg cagtaggata agcgcggtgt tcggccgcgt
     3601 ccatgtcagg acgctcagtg gcgggtgggg aagcgtgtgc aggcgtcgtc tgccatcaat
     3661 tcgagatggt gacgctcggt tgcgtcgtcc gccgggaaca tgcactcgac ccgcaattcc
     3721 tgcgcggcgg ccgtttgtgg cgttccgacg gtggtgatca acgaaaaata gttcagcacc
     3781 acgccgtcct tgatgaaacc cagcggtatg accggcatgg cacctgtatg ctcaggcgcc
     3841 tgccattcgg ctttcacatc cggataggca agcaactcgg caagcagttg cttcgtcttt
     3901 tcgtcgacga cgcgtcccac ggattcccga taaacgcgcg ccagcaggct tttggccgca
     3961 tcgtcccagt tggcgatgaa gggccgcacc cccgcgggat cgaacatcag atggaggagg
     4021 ttgcggggcg tggggcgtgc ccccagttcg acgaagcaat tgaagaaacg cggtgcggct
     4081 tcgttggtca acagcacgtt ccagtagcgg tccattacca tggcagggaa aggctcgtgc
     4141 tggcgcagca tcctcctcaa cgcgccggtg acacgttgca tgtcgggcgc gtcccatgcg
     4201 ctctccgagt agatcggcgc ataaccggct gccagcaaca atgtgtttcg ctcacgcagc
     4261 ggaatatcga gggcttcagc gatatccagc agtttgcctc ggctgggaac gctgcgtccg
     4321 ctttcgatga aactgatatg ccgctgcgac acgccgctat ccatcgagag atcaagctga
     4381 cttcgcccac gcacatcgcg ccagtggcgc aacaacactc gcagttcgtt cggtgttgat
     4441 ttcgtggcga cggttgatga acgcatgcaa tcccagcttc ccttttccac gccgtctcgt
     4501 cctgaggaac cgaatgggcg cctcggtgaa gaagcgccca gacggtttct attgagcagt
     4561 ccatatgtgg gactggaatg gcccctcgac cggcggtttc gtcacgctgc cggtgtaatt
     4621 ggtgatggtc gatgcggcga cgaccgctat tacctcaagc agatggtcct tgccgaaccc
     4681 agccccgatg aaacgatcga catcctgatc gtccaggcgg ccacgtttct cgatcaaggt
     4741 tttcgccagg accgacagcg cggcctgctg gccgtccacc ggggcacgcc ccacccgaat
     4801 ggcctgaaca tccgtcgcgt ccaccccggc ctgaaaggcg agcgccgtgt ggaatgcgac
     4861 cgcccactcg caggcgttgg tcaccgcgtt ggtcaacagc aacacctgga tctgggcctc
     4921 cgaaaaacta ccgccatgca ccctttggaa cagaccaacc agactattga tcagcaccgg
     4981 agacgtcgcc atggccccgg cgatattcgg gaccatgccg aatgccgcct gcaacgcctc
     5041 cagcgccggc ctcgattgtt ctggggccga cgcgattgtg tgaaccggaa aatcctgcat
     5101 catctttgcc tttgcaatac tgggaaatcg aacgatcgaa cacagaacac tcgcttgttc
     5161 gtggaccaca gatggccgaa tgccggcatg cattcaatta cgtcgcggat aatcaaacct
     5221 ggaattcggc ttgaatgctg gaacatcaaa ggtagcgccc gctgcgcaat cggcctaagt
     5281 cccgccaatg tcattccccc ctgtccatcc ggtgctcgac gcggcactcc tcgcgcgcgg
     5341 ctatctcgaa cccaccgaag tccaatcggc cgtgctgcaa cccgacgcgg ccggccgaga
     5401 cctgctggta tccgcccgca ccgggtctgg caaaaccgtc gccttcggtc tggccgccgc
     5461 gtcgaccctg atcgcggacg gcgacatgcc ggcccccggc gcacccatcg ccctggtcat
     5521 cgcccccacc cgtgaactgg cgctgcaggt gcagaccgaa ctcgcctggc tctatgcccg
     5581 ggcccgcatc gcgtcctgcg tcggcggcat ggacatcagg cgagaagcgc gggcgctgca
     5641 cgccggttgc cacatcgtcg tcggcactcc cggccgcctg ggcgaccatc tgcgccgagg
     5701 caacctggac ctctcggcgc tgaaggtcgt cgtgctggac gaagccgacg aaa
//
LOCUS       DATAVD010000497         3708 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1909979, whole genome shotgun sequence.
ACCESSION   DATAVD010000497 DATAVD010000000
VERSION     DATAVD010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3708
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1909979"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1201
                     /locus_tag="VHX39_09250"
     CDS             <1..1201
                     /locus_tag="VHX39_09250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX3991343.1"
                     /translation="PEPSARPGQPPDFNWIKLPAAGSVTRPDIGVEPGAIREHAFTLI
                     RVLDDNGDAAGPWDPRLDPEILRRGLRAMMLTRAYDRRMFRAQRQGKTSFYMPCTGEE
                     AIGVAQAMALDDRDMTFPTYRQQGLLITRGWPLVDMMNQVYSNSHDRLKGRQMPIMYS
                     SKEAGFFSIAGNLATHFPQAVGWAMASAIRHDDRIAAGWIGEGATAEGDFHHALTFAS
                     VYRAPVILNIVNNQYAISSFQGIAGGEHTTFAARGLGYGLPSLRVDGNDFLAVHAVTS
                     WAADRARSNLGPTVIELLTYRASAHSTSDDPSKYRPADEASQWPLGDPIARLRAHLVA
                     LGVWSDEQHDQLAAEVDGAVREAQREAESYGTMGVGENHSPATMFDDVFKEMPWHLRR
                     QRQELGF"
     gene            1213..2217
                     /locus_tag="VHX39_09255"
     CDS             1213..2217
                     /locus_tag="VHX39_09255"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEX3991344.1"
                     /translation="MSMVQALNSAMDVMMGRDDKVVVFGEDVGYFGGVFRCTEGLQRK
                     YGADRAFDTPIAEAGILATAVGMGVYGLRPVVEIQFADYIYPATDQLISSAARLRYRS
                     AGEFTAPITVRSPCGGGIFGGQTHSQSPEAIFTHVCGLKTVIPSNPYDAKGLLISAIE
                     DDDPVIFLEPKRLYNGPFNGHYDQPVTPWTEHPSGEVPEGYYTVPLSTASVVRAGEDV
                     TVLTYGTMVHVALAAVAESGVDAEVMDLRTLVPIDIDTIVASVTKTGRCVIVHEATRT
                     SGFGAELSALVQENCFYSLEAPIVRVTGWDTPYPHSLEWEYFPGPRRVAEGLRKAMEG
                     "
     gene            2219..3514
                     /locus_tag="VHX39_09260"
     CDS             2219..3514
                     /locus_tag="VHX39_09260"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HEX3991345.1"
                     /translation="MGRFVFKLPDVGEGIAEAEVVAWHVAVGSMVGEDDPLVDVMTDK
                     ATVELPSPRAGRVVAITGSPGDKVRVGSELLVLDVDNDEASQEGAVSTEAATAPSVAP
                     ALQAPDRPPPTAAKAPVTEPPAPAETEPSVAVPRSSETKPLASPAVRRRAHEFGIALQ
                     FVPGSGPAGRIGHADLAAYIASGRAAAVGTARPVRRAGPDSIEEIKIIGLRRRIAERM
                     QESKRRIPHYSYVEELDVTALEELRAHLNGRHGTERPRLTLLPFLIRALVCAIPQFPQ
                     VNALFDDEAGIVRRHAALHIGIATQTPQGLMVPVVRHAEALDLWELASEISRLAASTR
                     DGKAVRDELSGSTLTITSLGPFGGIVTTPVINRPEVAIIGVNRIIERPIVLGGQILIR
                     KMMNLSSSFDHRVVDGWDAAQFVQALKGLLEQPATLFVE"
     gene            3522..>3708
                     /locus_tag="VHX39_09265"
     CDS             3522..>3708
                     /locus_tag="VHX39_09265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010514248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3991346.1"
                     /translation="MIRTKVLVVGGGPGGYVAAIRAGQLGLDTVLVEADRLGGTCLVR
                     GCIPSKALIHAAAKFDDM"
BASE COUNT          667 a         1147 c         1232 g          662 t
ORIGIN      
        1 ccctgagccg tcggcccggc cggggcaacc gccggacttc aactggatca aactgcccgc
       61 ggcagggtcc gtcacgcgtc ccgatatcgg cgtggagccg ggtgcgatac gcgagcatgc
      121 cttcactctg atccgggtac tcgacgacaa cggcgacgca gcaggaccgt gggatccaag
      181 actggacccc gagatactgc gtcgcggtct gcgggcgatg atgctgaccc gcgcgtatga
      241 ccgccggatg ttccgtgcac agcgccaggg caagacgtca ttctacatgc cttgcaccgg
      301 cgaggaggca atcggcgtag cgcaagccat ggcgctcgac gaccgggata tgacgtttcc
      361 gacctaccgg cagcaggggc tgctcatcac gcgtggctgg ccgttggtcg acatgatgaa
      421 ccaagtctat tccaattcgc acgaccggct gaaggggcgc cagatgccga tcatgtattc
      481 cagcaaggag gcgggatttt tctccattgc cggcaatctg gccacgcatt tcccgcaggc
      541 ggtcggctgg gccatggcct cggccatccg gcacgacgat cggattgccg ctgggtggat
      601 cggcgagggt gcaaccgcgg agggcgactt ccatcatgcc ctgacattcg ccagcgtcta
      661 tcgcgccccg gtcatcttga acatcgtcaa caaccaatat gccatatcat ctttccaggg
      721 aatcgcgggc ggagagcaca cgaccttcgc agcacgtggc ttggggtacg gcctgccgtc
      781 cctgcgagtt gacgggaacg acttcctcgc ggtgcatgcg gtaacaagct gggcagccga
      841 tcgggcacgt tcgaacctgg gaccgaccgt catcgaattg ctcacctacc gggcgtcggc
      901 gcattccacc agcgatgatc cgagcaaata ccggccggcc gacgaggcga gtcagtggcc
      961 gctgggcgat ccgatcgcgc gcctgcgggc gcaccttgtg gcgctcgggg tatggtcgga
     1021 tgagcagcat gaccaactcg cggcggaggt ggatggcgcg gtgcgcgagg cccagcgcga
     1081 ggccgaaagc tatggcacga tgggtgtcgg cgagaaccac agtcccgcga cgatgttcga
     1141 cgatgtcttc aaggaaatgc cctggcatct gcggcgccag cggcaggaac tggggttctg
     1201 agcatggcgc ggatgagcat ggtacaggcg ctgaactcgg cgatggacgt gatgatgggc
     1261 cgggatgaca aggtcgtcgt tttcggcgag gacgtcggct actttggcgg tgtgttccgc
     1321 tgcaccgagg gtttgcagcg gaagtacggg gcggatcgcg cgttcgacac gccgattgcc
     1381 gaggcaggca tcttggcgac cgccgtcggc atgggcgttt acggtttgcg tccggtcgtg
     1441 gagatccagt tcgcagacta tatttatccc gcaacggatc agcttatttc atcggcggca
     1501 cggcttcgct atcggtcggc gggcgaattc accgcgccaa tcaccgtgcg ctcgccgtgc
     1561 ggcggcggca ttttcggggg gcagacgcat agccaaagcc ccgaggcgat tttcacccat
     1621 gtttgcgggc tgaagacggt catcccgtcg aacccctacg atgccaaggg tctgttgatc
     1681 agcgcgatcg aagacgacga ccctgtcatc ttcctcgagc ccaagcgtct ctataacggc
     1741 ccattcaacg ggcactacga tcagccggta acaccgtgga ccgagcatcc gtcgggagag
     1801 gtgccggagg ggtattatac tgttccgctc agcacggcgt ccgttgtgcg ggctggcgaa
     1861 gatgtgacgg ttctgaccta cgggacgatg gtgcacgttg ccttggcggc ggtcgccgag
     1921 agtggtgtgg atgccgaagt aatggatctg cgcacgctgg tccccattga tatcgatacg
     1981 atcgtggcct cggtcacgaa gacgggacgt tgcgtgatcg tccacgaggc cacccgcacc
     2041 agcggtttcg gtgccgaact gtcggcactc gtacaggaga actgcttcta tagcctggag
     2101 gcgcccatcg tgcgggtgac cggctgggat acgccatacc cgcattcgct ggagtgggag
     2161 tatttccccg gcccgcggcg cgtcgcggag gggctccgca aggcgatgga gggctgacat
     2221 gggacgcttc gtgttcaagc ttcctgacgt cggagagggc atcgcggagg cagaggtcgt
     2281 cgcttggcac gtcgcggtcg gttccatggt cggcgaggat gatccgctgg tcgatgtcat
     2341 gaccgacaag gcgactgtgg agctaccctc gcctcgggct ggccgggttg tcgcgatcac
     2401 cggcagcccg ggcgacaagg ttcgcgttgg gtcagagctt ctggtgctcg atgtcgataa
     2461 cgatgaagca tcccaggagg gagcggtctc gacagaggct gccaccgctc catccgtggc
     2521 gcccgcgctg caagctccgg atcgtccgcc gcccacggca gcgaaagcgc ctgtaacaga
     2581 gccgccggcg cctgcggaaa ccgagccttc ggtcgccgtc ccgcgttcaa gcgagacaaa
     2641 accgctcgct tcgccggcgg tgcgacggcg tgcccacgag ttcggcattg cattgcaatt
     2701 cgtccccgga agcggaccgg ctggccgcat cggacatgct gacctcgctg cctacattgc
     2761 gtccggacga gctgccgcgg tcgggaccgc ccggccagtc aggcgcgcgg gcccggacag
     2821 catcgaagag atcaagatca tcggccttcg acgccggatc gccgaacgca tgcaggagtc
     2881 caaacgccgg attccgcact actcctatgt cgaggaactc gacgtgacgg cgcttgagga
     2941 actccgcgct cacctgaatg gccggcacgg gaccgagcgg ccacgcctga cattgctgcc
     3001 gtttctgatc cgcgcgctgg tgtgcgctat accgcaattt ccccaggtca acgccttgtt
     3061 cgatgacgag gcggggatcg tgcgccgcca cgcggccctg catatcggca tcgccaccca
     3121 gacgccgcag ggactgatgg tgcctgtcgt ccgccacgcc gaggcactgg acctttggga
     3181 actagcgtct gaaatctcgc gcctcgcagc atcgacgcgg gacgggaagg cggtccgcga
     3241 cgaactcagc ggctcgaccc tgacgatcac cagcctcggg cccttcggcg gcatcgtgac
     3301 gacccctgta attaaccgcc ccgaggtagc aatcatcggt gtaaaccgga tcatcgagcg
     3361 gccaatcgtg ctcggcgggc agatcctaat ccgcaagatg atgaacttgt ccagttcatt
     3421 cgaccaccgc gtagtggatg gctgggacgc cgcgcaattc gtgcaggccc tgaagggact
     3481 gctcgagcag cccgcgacgc tcttcgttga atgaggaaac gatgattcgc accaaggtcc
     3541 tcgtggtggg cggcggtccg ggtggctacg tagcggccat tcgcgccgga caactcgggc
     3601 tggacaccgt gctcgtggag gccgaccggc tcggcggcac ctgcttggtc agaggctgta
     3661 ttccgtccaa ggcgctgatc cacgcagccg caaaattcga tgacatgc
//
LOCUS       DATAVD010000498         7961 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1349614, whole genome shotgun sequence.
ACCESSION   DATAVD010000498 DATAVD010000000
VERSION     DATAVD010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7961
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1349614"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..343)
                     /locus_tag="VHX39_09270"
     CDS             complement(<1..343)
                     /locus_tag="VHX39_09270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991347.1"
                     /translation="MTEDPDYKDLARLAVADAERQPHDTAVLLHAAMMLLHSGDTAQS
                     KRFARAALSVDPASFSALRTLSGILDAVGERAEAISIGKEAIGVAPANAEIRLHVGAM
                     LAAERQWKEAAE"
     gene            complement(340..1446)
                     /locus_tag="VHX39_09275"
     CDS             complement(340..1446)
                     /locus_tag="VHX39_09275"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015774 - polysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HEX3991348.1"
                     /translation="MTLSRKLLGTAALGLALAACSTVPGSGPRTGDIERASPNYTLVD
                     LNPVAARTVSSFVAGQHVERPIDLPPGRVNGLIGAGDLLRIAIWEPNPDGTSLTTEKS
                     GIETTTRVAVDGTIGVPYVGRLRAGGHTPAQVEQAVSARLASEVPDAQVAALVTDDLT
                     NDVIVQGDVVKPGRYPVVPNSSGLLDILAMAGGPRIPDYQALVRITRGGTSVTRSLSE
                     MVNNRALERDMAPGDRILVEPRRSYFYAFGEVNHPGEQSYDADGMTLAHTLARIEGLS
                     DNHADPAAVFVYRRQPAELTRQLAPGHDSTQVIYRLNLRDPAGFFISQTFPVLPDDLV
                     YVSEAPISEAGKVFQIITGVSSVGAIPRNLGASY"
     gene            complement(1443..2237)
                     /locus_tag="VHX39_09280"
     CDS             complement(1443..2237)
                     /locus_tag="VHX39_09280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991349.1"
                     /translation="MSFIATADAEKIRKTATLDQFPLLRTFPPGAKLIGSFGFLSPYK
                     GFETALRALHYLPEDYHLLIFGGVHPQAIKREQVIDPYIQTLLDEAHIGQSILDTMNV
                     KGTPLSLNLDAASKDLLSRHPDDLYRRVHFLGVHNDEAFMRAMVLCDMVVLPYLEVGQ
                     SSSGPIAMALEMGCRVLASRTLAFLQFARYHPNQIEFFDIGNYAELADLILADTPASG
                     GERQLDFHTGTNTTMYLEASQPRFSKLSRQRDKISQPSNAISESVL"
     gene            2241..2846
                     /locus_tag="VHX39_09285"
     CDS             2241..2846
                     /locus_tag="VHX39_09285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991350.1"
                     /translation="MMIDVLDTEYVAQQPSIALCMDNHADRLRPLAGSQKPISAGTKV
                     AIAVEGADGSKRRNDPTGDKAEPDRGPVHRVLTQNGMKRNGHRGSGGYQFAKAAQDLP
                     RGAAQCTIFELYIDAVKFAQTCGDFLDVLIGEPLDAFVRGAQQVLIQVEDGHLGMRTK
                     LLFQCPSVTGDATHLIISTDDRKTKRTGSRRSGSIEQARPP"
     gene            3232..4467
                     /locus_tag="VHX39_09290"
     CDS             3232..4467
                     /locus_tag="VHX39_09290"
                     /inference="COORDINATES: protein motif:HMM:NF017011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular biosynthesis protein"
                     /protein_id="HEX3991351.1"
                     /translation="MHSLGQALSARGHGVSRVNFNGGDRLDWPSLPSIDFTGRMSEWP
                     TFLQRLLLDLAPTDLILHGDCRPLHKVAIEQANRHGITVHVFEEGYLRPHWITLEVGG
                     VNGYSRLPRTVAAYHVAADLLPARPAAAHVPPSVRTRARDCITYGAACVALGPLFPRY
                     ATHRGWSLPREAIGWIKRVLRSPFVGRRSRAAVRHAFAATNGFFVLPIQMDNDSQILC
                     HSDIGGMMHAIRLVIASFARHAAPGAVLAVKEHPLDNGLINWRGVTEAAARDAGVADR
                     VVLIEDHDLQLLLDCALGMITVNSTSATFALASGVPVIALGRSVYDLPGLTHQGSLET
                     FWRTPSPPDMALFEAFRRVLMHACLLDGDFFTREGVTRAVAGAVPRIEAAHDAATRIN
                     DIVDAAVTRVSTAGAASVA"
     gene            4464..5726
                     /locus_tag="VHX39_09295"
     CDS             4464..5726
                     /locus_tag="VHX39_09295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEX3991352.1"
                     /translation="MTGCRPIWLDIARLVERACVGSLTGIDRVELAYAEHLITWAPER
                     TRFVMIGRWSSRLRMLPDAVTRRFLTGVRRAWGAGTPSDMRGSAVRLLAIAAVAPPVP
                     ADPSAVYLLVSHRHLHKHSALAQAVRRSGVAFVPLIHDLIPMEFPEYGRPGEAARHRC
                     RLDTVVRLADGVIVNSAATRTALAAYLPAGRPVLVAPLGVSPPAPGPAPIVGGRPYFL
                     CVGTIEPRKNHLLLLHLWRRLIAEHGETVPRLLIVGQRGWENENVVDLLDRCTALRGH
                     VTELGTVSDTRLTALLRGARALLMPSFAEGFGLPVAEALAHGTPVLCSDLPALREAGG
                     LVPEYLDPLDTPAWGAAVMDYAINGSPRRDAQIKRLPYWGGTTWDIHMGSVLDFLDVV
                     ESRAGADRDQPKRLPVIIPGTALLNSAP"
     gene            complement(5750..6931)
                     /locus_tag="VHX39_09300"
     CDS             complement(5750..6931)
                     /locus_tag="VHX39_09300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014189814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate 3-monooxygenase"
                     /protein_id="HEX3991353.1"
                     /translation="MRTQVGIIGCGPAGLFLAHLLHRIGISSVIIESRGRQEVEQTIR
                     AGVLEHWVVELIKELGLGARMMREAHVHDGITLQWNRERHHVDIQGLTSGKRNIVYAQ
                     HEVLKDLIAGRLAHGGEIVFGVGDTMIRDVDTVRPSIDFRRDGTGAQETIHCDYVVGA
                     DGFHGPGRQAIPISNRVEFQKIYPFGWLGILTSAPRSWEEIIYANQGDGFALLSTRSP
                     EMQRLYIQCNPSDDIANWPDARIWEQLQTRLGTDDGWSLTEGPIVQKGIIPLRSFVCE
                     PMQYGRLFLAGDAAHIVPPTGAKGLNLAVADVLVLSRALEAKYQRNSQDLLDRYSATC
                     LRRVWKAERFSWYMTTMLHRNEQETDFEHRIHFADLDLVRTSEASARSLAENYVGLPF
                     D"
     gene            complement(7066..>7961)
                     /locus_tag="VHX39_09305"
     CDS             complement(7066..>7961)
                     /locus_tag="VHX39_09305"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3991354.1"
                     /translation="RAIDVHVHPMNEAYVQASMPFMPAAQRMFKGKFAARPDQQIADD
                     FRRDNTLAIPIAWDAEHGAAGGVYANEALAALTRDYPDVFLPGWAMVDPWRGRKGLEE
                     IEHAIKTLGLLGVKYQPPVQGFSPNDKQFYPIWDLLQSLGAPVLIHCGTTAIGSGEPG
                     GLGFKLGHARPIPNIDDVAADFPHLNIVAAHPGWPWTEELIAVAIHKANVSIDISGWG
                     PKYIPAALKHDMQRRLQDKVLFGSDYPGWSPGQCCDEWEMEGFRPGVVEKLFHQNATR
                     ILKLENAVAAASRAAGTGQTQ"
BASE COUNT         1451 a         2386 c         2557 g         1567 t
ORIGIN      
        1 gctcggccgc ttccttccat tgccgctcgg cggcaagcat cgcaccgaca tgaagtcgta
       61 tctcggcatt ggccggggca acgccgatcg cctccttgcc gatgctgatc gcctccgccc
      121 gttcgccaac cgcatcgagt atgccgctga gcgttcgcag cgcggaaaag ctggctgggt
      181 cgactgacag ggcggcgcgt gcgaaacgtt tggactgtgc cgtatcgccg gaatgcaaca
      241 gcatcatggc cgcatgcaga aggacagcgg tatcatgggg ctgtcgttcc gcgtccgcga
      301 cagccagccg agccagatcc ttgtagtcag gatcttcggt caatagcttg cccccagatt
      361 gcgtggaatg gccccaacgc tgctgacgcc ggtgatgatc tgaaatactt tcccggcttc
      421 ggaaattggc gcctcgctga cataaaccag atcatccggc aggacgggaa acgtctgcga
      481 aatgaaaaat cctgcaggat cgcgcaagtt caaccgatag atcacttgcg tgctatcgtg
      541 gccgggcgcg agctgtctgg tcagttcggc gggttggcgg cgatagacga acacagcagc
      601 gggatcggca tggttatccg aaaggccttc gatccgcgcc agcgtgtgcg ccagggtcat
      661 gccgtccgcg tcgtaagatt gctcaccggg gtggttgacc tctccgaaag cgtagaagta
      721 gctccggcgt ggttccacca ggatacggtc cccaggggcc atgtcccttt ccagcgcccg
      781 gttgttcacc atctccgaca agctgcgggt caccgaagtg ccgccgcggg tgatgcgcac
      841 cagcgcctgg taatccggta tgcgcgggcc acccgccatc gccaggatat caagcaggcc
      901 actggaattt ggcaccaccg gatagcggcc tggcttaacc acgtcaccct gcacgatgac
      961 gtcgttggtc agatcatcgg tcaccaaggc ggcgacctga gcgtcgggca cctcggacgc
     1021 cagccgtgcg ctgacggcct gctcaacctg cgccggggtg tgaccacccg cgcgcagccg
     1081 gccgacataa ggcacgccga tcgtgccgtc gaccgcgacc cgggtggtcg tctcgatccc
     1141 ggatttttca gtggtcagcg aggtgccatc gggattgggc tcccagatag cgatccgcag
     1201 caggtctccc gcaccgatca atccattcac acgaccgggg ggcaggtcga ttggccgttc
     1261 cacatgctgt ccagcgacga aactgctgac cgtgcgcgcc gcgaccgggt tcagatcgac
     1321 cagcgtgtag tttggtgagg ctcgctcgat atcgccggtt cgcggcccac tgccgggtac
     1381 ggtggaacac gcggccaagg ccaggccgag cgcggcggtt cccagcagtt tgcgcgacag
     1441 ggtcataata cgctctccga aattgcattg ctcggctgtg aaatcttgtc ccgctgccgg
     1501 ctcagtttac tgaagcgggg ctggctggct tccaaataca tggttgtatt ggttccagta
     1561 tgaaaatcga gctggcgctc gccccccgat gcgggcgtgt cggccagtat caaatcggcc
     1621 aactcggcat agttgccgat gtcaaagaac tcgatctgat tggggtggta ccgggcgaat
     1681 tgcaagaatg ccaaggtccg cgatgccagc acgcggcagc ccatctccag cgccattgcg
     1741 atcggtccgg aactggactg gccgacctcc agatacggca gcacgaccat gtcgcacagc
     1801 accatcgcgc gcataaacgc ttcgtcgtta tgcacaccca ggaaatgcac gcggcgatac
     1861 aggtcatcgg gatgccggct gagcagatcc ttcgacgccg cgtccagatt gagcgaaagc
     1921 ggcgtgcctt tcacattcat cgtgtccagt atggactgtc cgatatgcgc ttcgtccagc
     1981 agggtctgaa tatagggatc aatgacctgc tcacgcttga tggcctgtgg gtggacgcca
     2041 ccgaagatca gcagatgata gtcttcgggc aaataatgca gagcccgcag ggcggtttcg
     2101 aagcccttgt agggcgacag gaagccaaac gaaccgatca atttagcgcc cggcgggaaa
     2161 gtgcgcaaaa gcggaaactg atctaatgtc gcggtcttcc gtatcttttc ggcgtccgct
     2221 gtggcgatga agctcaacgg atgatgattg acgttttgga tacggaatac gtcgcgcagc
     2281 agccgagcat cgcgctttgt atggacaatc acgctgacag gctgcgtccg ctggcgggct
     2341 cgcagaaacc gataagtgcg ggcaccaagg tcgcgattgc ggtggaaggc gctgatggtt
     2401 cgaaacgcag aaacgatccg accggtgaca aggctgaacc cgaccgcggc ccagtccacc
     2461 gggtcctgac ccagaatggt atgaaacgta acggacaccg cgggagcggc ggttaccaat
     2521 ttgcgaaagc ggcgcaagat ctgccgcgtg gtgcggccca gtgtaccata ttcgagttgt
     2581 atattgatgc tgtcaaattc gcgcagacgt gcggcgattt ccttgatgtg cttatcggcg
     2641 agccgctgga cgcgtttgtg cggggagcgc agcaagtact gatccaagtc gaagacggtc
     2701 acctcggcat gcggacgaag ctgctgttcc agtgcccgag tgtaaccggc gatgccacac
     2761 atctcatcat aagtactgat gatcgcaaga cgaagcggac cggatcgcgg cggagtggct
     2821 ccatcgaaca agcgaggcct ccttaatctg actgacgccg ctgcgctcac catggcgagg
     2881 catacgcggc gatgcgctga gaccgttttt acgccgtgat atgtttacga ttggttaacg
     2941 cggccttcgc ggcccacaga aaaattttgc cggcgaggca aaagactcgg ttgttacaaa
     3001 cgttttgtta accagatcga cctatctttg catggctgaa agcgggttga cccctgtcgc
     3061 cggcggcatt tgacaaaaga tcagggaaaa acccctatga cagcagcttc tttcgaagcc
     3121 gccctctcac ggccttcgcg ggcatccgat cgtgtccgct cgttgaatcc tgtggtgcga
     3181 attttcccgc atcgccggtt cctctttcta cagggcgtgc cgggatcttt catgcacagt
     3241 ctgggacagg cgctgtccgc acgcggccac ggtgtatcac gcgtcaattt caacggcggc
     3301 gaccgactgg attggccatc actgccgtcc atcgatttca ccggccggat gagcgagtgg
     3361 cccacgttcc tgcaacgcct gctgctcgat cttgcaccga ccgacctgat cctgcacggc
     3421 gattgccgtc cgctacacaa agtcgccatc gagcaggcga atcgtcacgg catcaccgtg
     3481 catgtgttcg aggaaggcta tctgcgcccc cactggatca ccttggaagt gggcggggta
     3541 aacggctatt cgcggctgcc gcgcaccgtg gcggcctatc acgtggcagc ggacctgctg
     3601 ccagcgcggc cggccgcggc ccacgtgcca ccgtcggtgc gcacccgggc tcgggactgc
     3661 atcacctacg gtgcggcctg cgtggcgctg ggtcccttgt tcccacgcta tgccacgcat
     3721 cgtggctggt cattgccacg cgaggccatc ggctggatca aacgggtgct gcgttcgccg
     3781 ttcgtgggcc ggcgcagccg ggcggcggtg cggcatgcgt tcgcggcaac caacggtttc
     3841 tttgtgctgc cgatccagat ggacaacgat tcgcagattc tgtgtcattc cgacatcggc
     3901 ggcatgatgc atgcgatccg cctggtgatc gcgtcgttcg cgcggcatgc tgctccgggc
     3961 gccgtcctgg cggtgaagga acatccgctg gacaacggcc tgatcaattg gcgcggtgta
     4021 accgaggcag cggcgcggga tgccggcgtc gccgaccgcg tcgtgctgat cgaggaccat
     4081 gatctgcaat tgttgctgga ctgcgcgctt ggcatgatca cggtgaacag caccagcgca
     4141 accttcgcgc tggcgtccgg ggtgccggtg atcgccctgg ggcgttcggt gtacgacttg
     4201 ccgggattga cgcaccaagg gtcgcttgaa acgttctggc gtacgccgtc gccacccgac
     4261 atggccttgt ttgaggcgtt ccggcgggtg ttgatgcatg cctgtctgct ggatggcgac
     4321 ttctttacgc gtgagggcgt gacgcgggcg gtcgcaggcg cggttccacg aatcgaggcg
     4381 gcacacgacg cggcgacgcg catcaatgat atcgtcgacg ctgctgtaac gagggtctcg
     4441 accgcgggtg cggcgtcggt ggcgtgactg gttgccggcc gatttggctg gatatcgctc
     4501 gtctggtgga acgggcttgc gtcggttctt tgaccgggat cgaccgggtc gaacttgcct
     4561 atgcggagca tctgattacc tgggcgccgg aacgcacccg gttcgtgatg atagggcgct
     4621 ggtcaagccg gttgcgcatg cttccggatg ccgtcacgcg acggttcctg acgggggtgc
     4681 ggcgagcgtg gggcgccggc acgccaagtg acatgcgggg ttcggccgtg cgcttactgg
     4741 cgatcgccgc cgtggctccg ccggtaccgg cagatccgtc cgctgtgtat ctgctggttt
     4801 cacaccggca tttgcacaag cattcggcgc tggcgcaggc ggtgcgccgt tcgggggtgg
     4861 cattcgtgcc gctgattcac gatctgattc caatggagtt tccggaatac ggacgcccgg
     4921 gtgaagccgc tcggcatcgg tgccggctgg acaccgtggt tcgcttagcg gacggggtga
     4981 tcgtgaactc ggccgccacc aggactgcgc tggcggcgta tctgccggcg ggacggccgg
     5041 tgcttgtcgc gccgttgggt gtctcgccgc cggcgcccgg tcctgcgccg atagtcggcg
     5101 gccggccata tttcctgtgc gtcggcacca tagagccgcg caagaatcat ctgctgctgc
     5161 tgcatctttg gcgacggctg atagccgaac atggggagac cgtgcctcgg ttgctgatcg
     5221 tcggacagcg tgggtgggag aatgagaatg tcgtggacct gctggaccgc tgcaccgcat
     5281 tgcgggggca tgtgaccgag cttggaacag tgtcagacac acggctgaca gccttactgc
     5341 gcggcgcccg agcgctgctg atgccgagct ttgcggaggg gttcggcctg ccggtcgccg
     5401 aggcgctggc gcacgggacg ccggtgttgt gcagcgatct gccagcgctg cgggaagctg
     5461 gcggattggt tccggagtat ctggatccgc tggatacacc ggcttgggga gccgcggtga
     5521 tggactatgc gattaacggg tcaccacgcc gggatgcgca aatcaaacgg ctgccgtatt
     5581 gggggggcac aacctgggat atccacatgg gctcggtact cgatttcctg gatgtggtgg
     5641 aatcccgggc gggggcggac cgcgatcagc cgaaacggct tccggttatc attccgggta
     5701 cggcattgct gaactcggct ccatgattcg ggagtttgcc caatcgggat caatcgaatg
     5761 gtaatccgac gtaattctcc gccaatgagc gtgccgacgc ctcggacgtt cgaacgaggt
     5821 cgagatcagc gaaatggatg cggtgttcga agtcggtttc ttgctcgttc cggtgaagca
     5881 tcgtggtcat gtaccaggaa aaccgctccg ccttccacac ccgccgcagg caggtggcgc
     5941 tgtagcgatc aagcaggtcc tgactgttac gctggtattt ggcctccagt gcccgcgaca
     6001 gcaccagcac gtcggcgacg gccaggttga gcccctttgc cccggtcggc ggcacgatgt
     6061 gcgcggcgtc gccggcgagg aacagccggc cgtactgcat cggctcacaa acgaaggatc
     6121 gcaaagggat gatgcctttc tgaacgatcg gtccttccgt cagcgaccag ccgtcatccg
     6181 tgccaaggcg cgtctgcaac tgctcccata tccgggcatc cggccagttg gcgatgtcat
     6241 cgctgggatt gcactggata tacagccgct gcatctcggg cgagcgggtg ctgagcagtg
     6301 cgaagccgtc gccctggttg gcgtatatga tctcctccca ggagcgcggg gcgctggtca
     6361 ggatgcccag ccagccgaac gggtagatct tctgaaattc gactcggttg gatatcggaa
     6421 tagcctgccg tccgggcccg tgaaaaccgt cggcaccaac gacgtaatcg caatggatgg
     6481 tttcctgggc accggtccca tcacgccgaa aatcaatcga tggacgaacg gtgtcgacat
     6541 cgcggatcat ggtgtcgcca acgccaaaga cgatttcgcc gccatgcgcc aggcgtccgg
     6601 cgatcaggtc cttcagaact tcatgctgcg catagacgat gtttcgcttg ccgctcgtca
     6661 ggccttggat gtcgacgtga tggcgctcac ggttccattg cagggtgatg ccatcatgaa
     6721 catgcgcttc ccgcatcatg cgcgcaccca gcccaagctc ctttatcagc tcgacaaccc
     6781 agtgctccag cacgccggca cggatggttt gttccacctc ctggcggccg cgggattcga
     6841 tgatgacgga gctgatcccg atgcgatgca gcagatgcgc cagaaacaat ccggcgggac
     6901 cgcagccgat gatgccaacc tgcgtgcgca cagtgcggcc ctcctaccgg atcaatcgtg
     6961 cgggatgttc ggtgcagcag gtcacccgcg cgccgacttg tttcgttgcc gtcctggcgg
     7021 agggaagcat actggccact cggacagtaa cggacgatcg tctcattatt gggtttgccc
     7081 cgttccagcg gctcgcgaag ccgcggcgac cgcgttctcc agtttcagga tgcgggtggc
     7141 gttctggtgg aacagctttt cgaccacacc cggccggaag ccttccatct cccattcgtc
     7201 acagcactga ccaggactcc agccgggata gtcagagccg aacagaacct tgtcctgcaa
     7261 acggcgctgc atatcgtgct tcaacgccgc aggaatgtat ttcggccccc agccggagat
     7321 gtcgatcgac acgttggcct tatggatggc caccgcgata agttcctcgg tccatggcca
     7381 gcccggatgg gcggcgacga tgttcaggtg cgggaaatcg gcggcgacgt cgtcgatatt
     7441 cgggatcgga cgcgcgtggc ccaacttgaa gcccagaccg ccgggttcac ccgaaccgat
     7501 cgcggtggtg ccgcaatgga tcagcaccgg cgcgccaagc gattggagca gatcccagat
     7561 cggatagaac tgcttgtcat tgggtgagaa cccttggaca ggcggctgat actttacgcc
     7621 gagaagacca agggtcttga tcgcgtgctc gatttcctcc aggcccttgc ggccacgcca
     7681 ggggtcgacc atcgcccagc cgggcaagaa aacgtccggg tagtcccggg tcagcgccgc
     7741 cagagcttcg ttcgcataga cgccgcctgc cgcaccatgt tcggcatccc aggctatggg
     7801 gattgcaagc gtattgtcac ggcggaaatc gtcggcgatc tgctggtcgg ggcgcgctgc
     7861 gaacttgcct ttgaacatgc gctgggctgc cggcatgaac ggcatgctgg cttggacgta
     7921 ggcttcgttc atcggatgga cgtggacatc gatggcgcgc a
//
LOCUS       DATAVD010000499         3267 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2468263, whole genome shotgun sequence.
ACCESSION   DATAVD010000499 DATAVD010000000
VERSION     DATAVD010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3267
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2468263"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..281
                     /locus_tag="VHX39_09310"
     CDS             <1..281
                     /locus_tag="VHX39_09310"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEX3991355.1"
                     /translation="PVDLPVARSAASAPTEPVILSVQRDLQLSVNDTPVARAQMADAL
                     RRISRGDLNTRIYLRADKNVRYGDLIDIMDLLRVAGYEKVALVSRQVP"
     gene            528..992
                     /locus_tag="VHX39_09315"
     CDS             528..992
                     /locus_tag="VHX39_09315"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3991356.1"
                     /translation="MPEIHTRVTPEIIRVGQIEIRYLQAGDNTCQMGCFELRVPPGSN
                     VPPPHSHSTNEELVYVLEGTLRYTVGSETRDLQPGDSMATARGVVHAFSNPHAVVARA
                     LVINTPDIGPGYFREVATIVNADGAPDRAALLATMRRYGLAPPTISRGGSPC"
     gene            1062..2147
                     /locus_tag="VHX39_09320"
     CDS             1062..2147
                     /locus_tag="VHX39_09320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991357.1"
                     /translation="MKRRGMLMRSRALVLACAVSVSMLLLTASSCGQARAAEASSCAP
                     VGGLSFICGVKNVEDIVRVSGTRWLIGSSMRQGKAATQPGAALYLIDSDAKTVRTASV
                     AIDPDKTGPFARCPAPDLTRLGTHGLELRPGKGGVDTVYAINHGGRESLEVFRVDARS
                     AVPKIAWTGCIMMPPNTWANSVAAMPGGALAISKFADLDKLNMAPVFRGEITGVTYLW
                     KPGSGFSEVKDGDLSGNNGLLASKDGQTLWVNETGRQRVVRLTIDGSAPPVYATVGFN
                     PDNLRWAPDGAILVTGQVIPRLNPSLGMANGWGVSRLNPQTMTVTPILSEPGRPEFSN
                     GTVALQVGKTLWLGSFRTDRIAYIQLK"
     gene            complement(2242..>3267)
                     /locus_tag="VHX39_09325"
     CDS             complement(2242..>3267)
                     /locus_tag="VHX39_09325"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3991358.1"
                     /translation="VLAQAGLQPTQAPPPSDHPVVKLDPALDELLSPDAKLEVVKDGF
                     GFTEGTQWIQHGKNGYLVFSDIPYNVIYKMTADGNATVLLNSSGYPGPWNGYMMLTAG
                     GAFGRAYVQIGSNGLAIDAQGRIVICRMGARDMTRLEKNGKVTELADAYEGKKFNGPD
                     DVVVKKDGAIYFTDTFYGLRSNNAANKGIDFMGIFMIKDGKLSLVVSDVKNTNGLAFS
                     PDEKYLYVNGSQDKYIKRYEVQPDDTVTNGTMLIDMHEDKAPGITDGMRVDARGNIWS
                     SGPGGIWVISPEGKHLGTILLPQTAANVSFGDQDWQSLYIAARGTIYRIRTLSVGQPC
                     PRCTGPK"
BASE COUNT          577 a         1031 c         1022 g          637 t
ORIGIN      
        1 tgccggtgga tctgccggtg gcgcgcagcg cggcctcggc gccgacagag ccggtgatcc
       61 tgagcgtgca gcgtgatctg caattgtcag tgaacgatac cccggtcgca cgtgcacaaa
      121 tggcggacgc tctgcgtcgt atttcgcgcg gggacctgaa cacgcggatc tacctgcgtg
      181 ccgacaagaa cgtgcgctac ggtgatctga tcgacatcat ggacctgctg cgcgtcgccg
      241 gctacgagaa ggtcgcgctc gtcagccgtc aggtgccata accttgaacg aagccgtgac
      301 atgcatccgg tgcgtgggtg tcccgcttcc ttgtcgcgct gagccaagag ggttatgagc
      361 cggcggatca acgagtctgc aaatttctcg tgaccggcgt cagtgcgatt gatgccaatg
      421 gctccacgca cggccagatg cgggccaggt ggtgtggttg tgtgggcatc actcgacgtt
      481 cgggtaagct ttgctgcgtt agagggcttt tgaggaaggg ggctgccatg cctgagattc
      541 acacgcgagt cacgccggag atcatccgcg tcgggcaaat agagatcagg tacctacaag
      601 cgggggacaa tacctgccag atgggctgct tcgagctgcg tgtgccgccg ggctccaatg
      661 tgccaccgcc gcatagccat tccacgaacg aggagctggt ttacgtgctt gaaggaacat
      721 tgcgctatac cgtgggtagc gagacgcggg atctacagcc cggcgactcc atggccacag
      781 cgcgtggcgt ggttcatgcc tttagcaacc cgcacgcggt cgtggcgcgg gcgctcgtga
      841 tcaacacacc ggacatcggg ccgggttatt tccgcgaagt cgcaacgatc gtcaatgccg
      901 acggcgcgcc cgaccgagcc gcgctcttag caacaatgcg acgctacggg ttggcgccgc
      961 cgacgatatc tcggggcgga tcaccgtgct gagcgcctcc tgacgggatc tgccgagcta
     1021 gcctcccacg atcgcacact cggctgaggt aaggaatgct gatgaaaaga agaggaatgc
     1081 tgatgaggag ccgggccctg gtgctcgcct gcgccgtgtc ggtctcgatg ctcctgctga
     1141 cggccagcag ctgcgggcaa gcgcgcgccg ccgaggcgtc gtcctgcgct cccgtgggcg
     1201 gactgtcatt catctgtggc gtcaagaacg tggaggacat cgtgcgcgtg tccggcacgc
     1261 ggtggttgat cggcagctcg atgcggcaag gcaaggcggc cacccagcct ggggcagctc
     1321 tctacctgat tgactcagac gccaagacgg tccggaccgc cagcgtggcc atcgatccgg
     1381 acaagacggg tcccttcgcc cgctgcccgg cgccggacct gacgcggttg gggacccacg
     1441 gcctggagtt gcgccccggc aagggcggcg tagatacggt ctatgccatc aaccacggtg
     1501 gccgggagtc gctggaggtg tttcgcgtcg acgcccggag cgccgtgccc aagatcgcct
     1561 ggaccggctg catcatgatg ccgcccaaca cctgggccaa ctctgtcgcc gcgatgcccg
     1621 gcggcgccct ggcgatcagc aagttcgcgg acctggacaa gttgaacatg gccccggtgt
     1681 tccgtggcga gatcaccggc gtcacttacc tctggaaacc gggctcgggg ttcagcgagg
     1741 tcaaggacgg cgacctgtct ggcaacaacg gcctgctcgc gtccaaggac ggccaaacgc
     1801 tgtgggtgaa cgagacaggc cgccagcggg tggtgcgcct tacgatcgac ggctcggcac
     1861 cgccggtata cgccacagta ggatttaatc cggacaatct gcgctgggcg ccggatggcg
     1921 cgatcctggt caccggtcag gtcattcccc gcctgaaccc atccttgggt atggccaacg
     1981 gctggggcgt gtcgcgcctc aacccgcaga ccatgactgt cacgcccatc ctgagcgagc
     2041 ccggccgccc cgaattctcc aacggcaccg tggcgctgca ggttggcaag acgctgtggc
     2101 tgggcagctt ccgcaccgac cggatcgcct atatacagct gaagtgagag ggtgtctgcg
     2161 acgctgcgag gtgagggcga gcgcgctcag cgccacaacc cgtactgcga acactgcccg
     2221 cgttctgcag aggctagcgc gctacttcgg cccggtgcac ctcgggcacg gctgccccac
     2281 cgacagcgtg cgaattctgt agatcgtgcc gcgcgctgca atgtagaggc tctgccaatc
     2341 ctgatcaccg aacgacacat ttgccgccgt ctgcggcagc agtatcgttc ccagatgctt
     2401 gccttctggc gagattaccc agatgcctcc cgggccgctt gaccagatgt ttcccctcgc
     2461 atccacgcgc atgccatcgg tgattcccgg ggccttgtcc tcgtgcatat cgatcagcat
     2521 cgtgccgttg gtgacggtat cgtcaggctg cacttcgtag cgtttgatgt acttgtcctg
     2581 gctgccgttc acgtagagat atttctcatc cggcgaaaag gccaggccgt tagtgttctt
     2641 cacgtcgctg accaccaagc tcaactttcc gtccttgatc atgaaaatgc ccatgaagtc
     2701 gatgcccttg ttcgcggcat tgttgctgcg cagcccgtag aaggtatcgg tgaaatagat
     2761 tgcgccgtcc ttcttcacca cgacgtcgtc cggcccgttg aatttcttgc cctcataggc
     2821 atcggctagc tcggtgactt tcccgttttt ctccaggcgc gtcatatccc gcgcgcccat
     2881 acggcaaatc acgatccgcc cctgcgcatc gatcgccagt ccgttgctgc caatctgcac
     2941 atacgctctg ccgaatgcac cgccggcggt tagcatcatg tagccgttcc acggacccgg
     3001 ataaccactg ctattcagca acaccgtggc gttgccatcg gccgtcattt tgtagatcac
     3061 gttgtagggg atatcactga agacgagata gccattcttg ccgtgctgga tccattgcgt
     3121 gccttccgtg aagccgaagc cgtctttcac cacttccagc ttcgcatccg gtgacagcag
     3181 ctcatcgagc gcgggatcga gtttgaccac cggatggtcg ctcggcgggg gtgcctgcgt
     3241 gggctgcagc cctgcctgcg ccagtac
//
LOCUS       DATAVD010000500         4516 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_419528, whole genome shotgun sequence.
ACCESSION   DATAVD010000500 DATAVD010000000
VERSION     DATAVD010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4516
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419528"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..859)
                     /locus_tag="VHX39_09330"
     CDS             complement(<1..859)
                     /locus_tag="VHX39_09330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEX3991359.1"
                     /translation="MRNIVPGDVAWVLVSTVLVLLMTVPGLALFYAGMVRKKNVLAIM
                     MQSFILCAVMTVIWMVAGYSLAFTNGNAWIGDFSRLFLNGIADQWNKPFTLGAGTAHA
                     LPTTIPESVFVMFQMAFAIITPAVVTGSCADRMKFSALLMFFTLWSLVVYAPLAHWVW
                     SPNGWLNTLGVADFAGGTVVEINCGVSGLVCALMLGRRLGYGHENMAPWNLSYAVIGA
                     SLLWVGWMGFNSGGALGANGRAGMAVLVTQIAAAGATLSWTFAEWFLRGKPSVLGAIS
                     GAVAGLVAIT"
     gene            complement(1043..1843)
                     /locus_tag="VHX39_09335"
     CDS             complement(1043..1843)
                     /locus_tag="VHX39_09335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991360.1"
                     /translation="MSLAPYRVRAFNTAKASENKIHDDATAQKFGFKSGFVGGVCVYG
                     YMSHQPLQRWGRDWLERGTGEAKFGKPVYDNEIAEVVAVEDAEGMELTVQSLGIDCAT
                     GRAALPANLPPVPALSDYKSVPVRADRLDPDEQTLPIGGWLGMNPLTITDAFLAQDIE
                     DTRETNPIYAREKIINPGTVLRCCNWVLSHNVILPAWIHMGSKVRNLGLARVGDTLNA
                     RARITKNYEHKGHKWVEVDCLVVANETSPVIQAIHIAIYRPRQLAEAA"
     gene            complement(1976..2866)
                     /locus_tag="VHX39_09340"
     CDS             complement(1976..2866)
                     /locus_tag="VHX39_09340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3991361.1"
                     /translation="MDTAVMTPAFDRTAEDLGNIVELGHVNVRVPDQSKAIAYYLMGL
                     GLTRDPYLMAGLDNMWVNVGRGQFHLPTGGPEVVRGTTALVVPDLEALVKRLHGAKRY
                     LEGTKFSYREAGGAVETTCPWGNRVRVHAPDADRFGPMRVGMPYVEFDIPTGTDLAAI
                     AKFYVEILGGIAGVDSDERGPYAWARTSAESKVIYRETNAPVPEYDGHHIQITLVDFS
                     GPHKKLLERGVISEESDQHQYRFLDIVDVDTNKPLFRIEHETRSMRHPMFGRTFINRN
                     PDMNNRNFVPGYEVGLWALN"
     gene            3032..4267
                     /locus_tag="VHX39_09345"
     CDS             3032..4267
                     /locus_tag="VHX39_09345"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3991362.1"
                     /translation="MSVVLSNSGLRALLSSATFLRLWSIGGCVNTMRWFEVLTAALFT
                     LDMTGSGLAVAVVSAARTMPMLLLGAFSGVVTEAVNRKSVLVFGQMLACSSSASVALL
                     AWAGVAQPWHVAVAALVSGLVWSTEMATRRRMVGECVESHLVSRALALDTMSNSFTRL
                     LGPIFAGVIYQRLGLAGAFGFSACVYALAAFLGSGVRHRQDTRRLVLGNVPRDLAEGV
                     RYVRGDLIIGGVLAVTIAMNLLGFPYSALIAPIGRIVFRVSPALVGVMAASESFGAFL
                     GGALLTSREPAISGRILMVGGSILYLACVVAMPLAPGFWIACGLLTVGGFGSAAFANM
                     QTSLIVLHTPAHIRSRLMGLLTVCIGMGPLGILLMGTVADFVGPMLAIDLVASVGLVS
                     VCVIGMVWRRRERRLAFSS"
BASE COUNT          713 a         1349 c         1576 g          878 t
ORIGIN      
        1 gcgtgatcgc caccagaccc gccaccgcgc cggagatcgc gcccaggacg gacggcttac
       61 cgcgcaggaa ccactcggcg aacgtccacg acagcgtagc accggccgcg gcaatctggg
      121 tgaccagcac agccatcccc gctcggccat tggcgcctag cgcgccaccg gagttgaagc
      181 ccatccagcc gacccacagc agcgacgcgc cgatcacggc gtagctcagg ttccaggggg
      241 ccatgttttc gtggccgtag cccagacggc ggcccagcat cagggcgcag acgaggccgg
      301 agacgccgca gttgatctcg acgacggtgc cgccggcgaa atcggctact cccagggtgt
      361 tgagccagcc gttggggctc cagacccaat gggcgagcgg ggcgtacacc accagcgacc
      421 acagggtgaa gaacatcagc agcgcggaga acttcatccg atcggcgcaa ctgccggtga
      481 ccacggcggg ggtgatgatg gcgaaggcca tctggaacat cacgaagacg ctctcgggga
      541 tggttgtcgg tagtgcgtgg gcggtgccgg cgccaagggt gaacggcttg ttccattgat
      601 cggcgatgcc gttgaggaac aggcgggaga agtcgccgat ccaggcgttg ccgttggtga
      661 aggccagcga atagccggcg accatccaga tcacggtcat caccgcgcac aggatgaagg
      721 actgcatcat gatggcaagg acgttctttt tccgcaccat cccggcatag aacaacgcca
      781 gtcccggcac ggtcatcagc agcaccagca ccgtgctgac cagcacccag gcgacatcgc
      841 ccggcacaat attccgcatc gttagcctcc cgatcgcagg cggccaactc aagaaacgtg
      901 ccatgaacgc gggctgcgga aggccgcttg ggaggcggat tgcctcatta ttgggcggcg
      961 gttgttgcct tccaggggag cagacggacg ctgttttgtg ggactgggtc cgaaacggtg
     1021 ctgcttaatc gttaggcaat cgtcaggcgg cctcagccag ttggcgggga cggtagatgg
     1081 cgatatggat tgcctggatg accgggctgg tttcgttggc aacgaccagg cagtcgacct
     1141 cgacccattt gtggcccttg tgctcatagt ttttggtgat gcgggcacgc gcgttcaggg
     1201 tgtcgccgac ccgcgcgagg cccagattgc gcaccttgct gcccatgtgg atccaggccg
     1261 gcaggatcac gttgtgggac agcacccagt tgcagcagcg caggaccgtt ccgggattga
     1321 tgattttttc gcgcgcgtag atcggattgg tttcgcgcgt gtcctcgata tcctgggcca
     1381 ggaacgcgtc ggtgatggtc agcggattca tgccgagcca gccgccgatg ggaagggttt
     1441 gttcgtcggg gtcgaggcgg tcggcacgaa ccgggacgga tttgtagtcg gagagtgccg
     1501 gaacaggcgg caggttggcc ggcagagcgg ctcggccagt cgcgcaatcg atccccaggc
     1561 tttgaacggt cagttccatg ccttcggcgt cctcgaccgc gacgacctcg gcgatttcgt
     1621 tgtcgtagac gggtttgccg aattttgcct cgccggtgcc gcgttccagc cagtcgcggc
     1681 cccagcgctg caggggctgg tgggacatgt agccgtagac gcagacgccg ccgacgaagc
     1741 cgctcttgaa accgaatttc tgcgcggtgg cgtcgtcgtg gatcttgttc tccgacgctt
     1801 tggcggtgtt gaaggcgcgg acgcggtagg gcgcgaggga cataagacac tccggaagat
     1861 cagcgaggcg ttcgatgacg gcgcgctctc tctagctcgt tgtcccggtc ctcggcgcgc
     1921 gaacggttcc ggggcggatg gccgggattt cacccggcca tgacgacgat cgtcgttagt
     1981 tcagcgccca gaggcccact tcatagcccg gaacgaagtt gcggttgttc atatccggat
     2041 tgcggttgat gaaggtgcgg ccgaacatcg ggtgacgcat gctgcgggtt tcgtgctcga
     2101 tgcggaacag cggcttgttg gtgtccacat cgacgatatc caggaagcga tactggtgct
     2161 ggtcggattc ctcggagatc acgccgcgct ccagcagttt cttgtgcggg ccggagaagt
     2221 ccaccagggt gatctggatg tggtgtccgt cgtactccgg caccggcgcg ttggtttcgc
     2281 ggtagatcac cttgctctcg gccgaagtgc gggcccaggc gtaggggccg cgttcgtcgc
     2341 tgtcgacgcc ggcgatgccg ccgaggatct cgacatagaa tttggcgatg gcggcgaggt
     2401 cagtgccggt gggaatgtcg aattccacgt agggcatgcc gacgcgcatc gggccgaagc
     2461 ggtcggcatc gggcgcgtgg acgcgaacgc ggttgcccca gggacaggtg gtttccaccg
     2521 cgccgccggc ttcgcggtag ctgaatttcg tgccttccag gtagcgcttc gcgccatgca
     2581 ggcgtttcac caacgcctcc aggtccggca cgaccagggc cgtggttccg cgaacgacct
     2641 cgggtccacc cgtcggcagg tggaactggc cgcggcctac gttcacccac atgttgtcga
     2701 gtccggccat cagatacggg tcgcgggtca ggccgagacc catcaggtag tacgcgatcg
     2761 ccttgctctg atcgggcacg cggacattca catggccgag ttcgacgatg ttgccgaggt
     2821 cctcggcggt ccggtcgaag gccggagtca tgacggcggt atccatcttg ttgctctccc
     2881 tgcacagcgg tgttcaatgc tggcccgcat tctagtcgtg gctttctgtc tggtccatcc
     2941 cggcgccgca tgctttgtat tcgggataaa accgagttta gggaaacgtc atgacttcgc
     3001 ctggccggac gacggggata tccccctcgc cgtgagtgtc gttctgtcca acagcgggct
     3061 gcgcgcgctg ctttcctccg ccacgttcct tcggctttgg tcgatcggcg gctgcgtcaa
     3121 tacgatgcgc tggtttgaag tattgacggc agcgctgttc accctcgaca tgacaggatc
     3181 gggccttgcc gtcgcggtgg tgtcggccgc ccgcacgatg ccgatgttgc tgctgggtgc
     3241 attctccggc gtggtgaccg aggcggtgaa ccgcaaatcc gtgctggtgt tcgggcagat
     3301 gctggcgtgc tcatcgtcgg catcggtcgc gctgctcgcc tgggcggggg tggcccagcc
     3361 gtggcacgtg gcggtcgcgg ccctggtttc cgggttggtg tggtccaccg agatggcgac
     3421 gcggcggcgg atggtgggcg aatgcgtgga aagccatctg gtatcccggg cgttggcgct
     3481 ggacacgatg tccaattcgt tcacccggct gctggggccg atcttcgccg gcgtgatcta
     3541 ccagcggctg gggttggcgg gcgcgttcgg cttttccgcc tgcgtgtatg cgctcgccgc
     3601 gttcctgggg tccggggtga ggcatcggca ggacaccagg cgcctggtgc tgggcaacgt
     3661 gccgcgcgac ctcgccgagg gcgtacgcta tgtccggggc gatctgatca tcggcggcgt
     3721 gctggcggtc accatcgcga tgaacctgct gggatttccc tattccgcgc tgatcgcacc
     3781 gatcggacgg atcgtcttcc gggtttctcc ggcgctggtc ggcgtgatgg cggcgtcgga
     3841 atcgttcggc gcgttcctcg gcggggcatt gctgacgagc cgggagccgg caatcagcgg
     3901 ccggatactg atggtgggcg gctcgatcct gtacctggcc tgcgtcgtgg cgatgccgct
     3961 ggcaccggga ttctggatcg cgtgcgggct gctgacggtg ggtgggttcg gatcggccgc
     4021 gttcgccaac atgcagacgt cgctgatcgt gctgcataca cccgcgcata tacgatcccg
     4081 gttgatgggg ttgctgacgg tctgcatcgg catgggaccg ctgggaattc tgctgatggg
     4141 cacagtcgcg gatttcgtgg ggccgatgct ggcgatcgat ctggtggcct cggtgggact
     4201 cgtctcggtt tgcgtgatcg gaatggtctg gcgccggcgg gagagacgcc tcgccttttc
     4261 gtcctgaatg cgccgaacct gccggcatcg gtggcaggcg atggggataa atggacgcct
     4321 cgctattggc actgccgccc gagccggtcg tggcgggcga aggccgtcat ccacgccgcc
     4381 ttccgagacc cgcacggcaa atccttgaag accgtgtcga gaggctgagg cgacgcgcag
     4441 gaatacccga gtcgcttgga cggcgcacgt cctctcatcg tcgtgggggg gcgaaggccc
     4501 gccatccacg ccctcc
//
LOCUS       DATAVD010000501         2223 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1910404, whole genome shotgun sequence.
ACCESSION   DATAVD010000501 DATAVD010000000
VERSION     DATAVD010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2223
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1910404"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1143
                     /locus_tag="VHX39_09350"
     CDS             <1..1143
                     /locus_tag="VHX39_09350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEX3991363.1"
                     /translation="RMQKLAEWDPYTLPIITERAGKIEYLDLIEGVTLVERMDEVTGL
                     TSKVVVDYKSGAKAADLRPRLQLKDAKGEVARLENGTDARYFLAPDSILSVDNGVQVA
                     AGDVLARIPREGSKTRDITGGLPRVAELFEARRPKDHAVIAECDGRVEFGKDYKAKRR
                     IIVKNDETGEETEYLIPKGKHVSVQEGDFVRRGDPLVDGPRVPHDILKVLGVEALSDY
                     LVNEIQDVYRLQGVKINDKHIEVIVRQMLQKVEITDPGDTTFLAGEQVDRTEFNHVNN
                     RLLKDDRPAVAMPVLQGITKASLQTNSFISAASFQETTRVLTEASTAGKTDSLMGLKE
                     NVIVGRLIPAGTGAVMNRLRAIAAGRDQQAVGGLVTPQIEEVKAAE"
     gene            complement(1198..2001)
                     /locus_tag="VHX39_09355"
     CDS             complement(1198..2001)
                     /locus_tag="VHX39_09355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF817 domain-containing protein"
                     /protein_id="HEX3991364.1"
                     /translation="MARRPGSAFLYEFIRFGVKQAWACLFGGIMIGLLLTTHWFWPRD
                     AWLARYDFVFLAALTVQGLMLGFGLETWEEAKVIFIYHVIGTIMEVFKTDVGSWVYPE
                     HSMFHILGVPLFSGFMYASVGSYIARCWRLFEFRFTHHPGLPALGVLSVAIYCNFFAH
                     HYVPDLRWLLFIAAAVLFRRTRIYYRVWRRYRWMPLLVGFLLVALFIWFAENIGTMSA
                     VWLYPHQHAGWSLVRWGKFGSWFLLLLISYTLVAFIDRPVAFKAASSTK"
BASE COUNT          529 a          622 c          684 g          388 t
ORIGIN      
        1 cgcatgcaga aactggctga atgggaccca tacacactgc cgatcattac ggaacgcgcc
       61 ggcaaaatcg aatatctcga tctgatcgag ggcgtgacgt tggttgagcg gatggacgaa
      121 gtcaccggtc tgacctcgaa agttgtcgtc gactataagt ccggcgccaa ggctgccgat
      181 ttgcggccgc ggctgcaatt gaaggacgcc aaaggcgagg ttgcccggct ggagaacggc
      241 accgatgcac gctacttcct ggcaccagac tcgatcctct cggtcgataa tggcgtgcag
      301 gtggcagcgg gcgacgtgct ggcccgtatc cctcgcgaag gcagcaagac gcgtgacatc
      361 accggtggtc tgccgcgcgt ggcagagttg ttcgaagcgc gcaggcccaa ggatcacgcg
      421 gtcatcgccg agtgcgacgg acgcgtggaa ttcggcaagg actacaaggc caagcgccgt
      481 atcatcgtga agaacgatga gaccggcgaa gaaaccgagt atctcattcc gaagggtaag
      541 cacgtctcgg tgcaggaagg cgatttcgtc cggcgcggcg atccgctggt cgatggcccg
      601 cgggtgccgc acgacatcct gaaggtgttg ggtgtcgagg cgctgtccga ttacctggtc
      661 aacgaaattc aggacgtgta ccggttgcag ggcgttaaga tcaacgacaa gcacatcgag
      721 gtgatcgttc gccagatgct gcagaaagtt gagattaccg atccgggcga tacgacgttc
      781 ctggccggcg agcaggtcga tcgcacggag ttcaatcacg tcaacaatcg gttgttgaaa
      841 gacgaccgtc cggcggtggc gatgccggtg ctgcaaggca tcaccaaggc gtcgctacag
      901 accaacagct tcataagtgc cgcttcgttc caggagacga cgcgtgtgct gaccgaggct
      961 tcgactgccg gcaagactga ttctctcatg ggtttgaaag agaacgtcat tgttggccgc
     1021 ctgatcccgg cgggcaccgg cgcggtgatg aaccgcctgc gtgctattgc agcgggtcgc
     1081 gatcaacagg cggttggcgg gttggtgaca ccgcagatcg aggaggtcaa agccgcggaa
     1141 tagtgctctg acgaaacgat taacggctgg cgccccgtta gggtcaccgg ccgtttttta
     1201 ttttgtgctt gatgctgcct tgaacgcgac tggccgatcg atgaaagcga ccaaggtata
     1261 gctgatcaac agcaacagaa accacgagcc gaatttgccc catcgtacca ggctccaacc
     1321 ggcatgttgg tgtggataaa gccacactgc gctcatcgta ccgatatttt ccgcgaacca
     1381 gatgaatagc gcgacgagca ggaatcccac caacaacggc atccatcgat accgccgcca
     1441 tacgcggtaa taaatgcggg tgcgccgaaa caggacggcc gcggcgatga acagcagcca
     1501 tcgcaaatca ggaacataat gatgggcgaa gaaattgcag taaatggcga cgctcaggac
     1561 gccaagagcc ggcaatccgg gatgatgcgt gaagcgaaac tcgaacagtc tccaacagcg
     1621 cgcgatataa ctgcccacgc tcgcatacat gaagcctgag aaaagtggca cgccaaggat
     1681 gtggaacatg ctgtgttcgg gatagaccca ggatcccacg tcggtcttga acacctccat
     1741 gatggttccg atgacgtgat aaatgaaaat gaccttcgcc tcttcccagg tttccagtcc
     1801 gaatcccagc atcagtccct ggacggtcag ggctgcgagg aatacgaaat catagcgcgc
     1861 aagccatgcg tcgcgtggcc agaaccagtg ggtcgtgagc aacagcccaa tcatgatgcc
     1921 gccgaacaga caggcccatg cttgtttcac gccgaaccga atgaattcat agaggaacgc
     1981 ggaacctggg cggcgtgcca tccgagcggc gaaaagtcgc tcccgtgcag cgaacggagc
     2041 gagagctcgc caacgcccgg cgcctcgacc cgatggtgcg gattggcgca ccttcacagc
     2101 ggcgataatg gcgatcgcat gatgcctgcc agcggatcgc gagtcaggga acgaaccagg
     2161 gagcggctgc cgtaacgcgg ccgatcagag cagatgcctc aatggcccaa cgcctggaca
     2221 atc
//
LOCUS       DATAVD010000502         1736 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_234727, whole genome shotgun sequence.
ACCESSION   DATAVD010000502 DATAVD010000000
VERSION     DATAVD010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1736
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234727"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..194)
                     /locus_tag="VHX39_09360"
     CDS             complement(<1..194)
                     /locus_tag="VHX39_09360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991365.1"
                     /translation="MRISRTVVLRLALLGVLLLAGVVRLWDLGDAGFGTEYYAAGVRS
                     MLINSHNLLYNAFDPAGILM"
     gene            complement(386..1555)
                     /locus_tag="VHX39_09365"
     CDS             complement(386..1555)
                     /locus_tag="VHX39_09365"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991366.1"
                     /translation="MTDRSAAFLDAARAMVPVLAEREASVMAARSISSETIAEFHRTT
                     ILRLLQPQRFGGHQENFWLFSRIIEILAEGCAASAWVYAVLAEHQWIIACMPERAQED
                     IWGADPLAVAASSLAPRETARTAAGGWRLSGRFPFSSGCLHSQWAIIGARCEDAAGNR
                     ATRYLLVPMPEIEIVDDWEVLGLRGTGSRSLLLDDVFVPTHRSILLRDLYDGTTPGAQ
                     VHPDYPLLRAPRGLVVPFSLTPVAFTLGRRALDFVAKSLSTRISRGTRMLAESEFVQQ
                     QLGDAAAEIETAILIMHARREATRTLVDSGAAIPPEAVLRNRRDIAFAAWQVRRGVER
                     LVELSGARAVYDTDPLQGLWRDVVTICTHTAVSRHVSMVPYGRLLLGLPPAAGEA"
BASE COUNT          346 a          536 c          575 g          279 t
ORIGIN      
        1 atcatcagta tgccagccgg atcgaatgcg ttgtaaagca agttgtgcga attgatcagc
       61 atgctgcgaa cgccggccgc gtaatattca gtgccgaaac cggcatcgcc gaggtcccag
      121 agccgcacaa cgccagccaa cagcaacacg ccgagcaacg ccaggcgcag cacaaccgtg
      181 cgagatatac gcacgccctg aggctcgatc gcggtttgca cactggggct catgagaagc
      241 ctgaaaaggt tggtccgaaa cggcagcgga cgtacggtcg cgatcgcgca aggtggatcc
      301 ggaatggtgt ttcccgcagc actaaattgt aaccgcgccg cttcgtcact tacacggaaa
      361 attccatggc actgtgtggg ggggcctatg cttctcccgc tgccggcggc agaccgagca
      421 gcagcctgcc atacggcacc atgctgacgt gccgggacac tgcggtgtgc gtgcagattg
      481 tcaccacgtc ccgccacagg ccctgcaacg gatcggtgtc atagacagcg cgcgcaccgg
      541 agagttcgac cagccgctcg accccccggc gcacttgcca ggcggcaaaa gcgatatcgc
      601 ggcggttgcg caacacggcc tccgggggaa tggcggcgcc ggagtcgacg agcgtccggg
      661 ttgcctcgcg gcgcgcgtgc atgatcagga ttgcggtttc gatctcggcc gccgcgtcgc
      721 ccagttgctg ttggacgaac tcggattcgg ccagcatgcg ggtgccccgg gagatgcgtg
      781 tgctcaacga tttggcaacg aagtcgagcg cccggcggcc cagagtgaac gccaccggcg
      841 tcagggagaa cggcaccacg aggccgcgcg gcgcacgcaa caaaggatag tccggatgga
      901 cctgagcacc gggcgttgta ccgtcataaa gatctcgtaa caaaatgctg cgatgggtgg
      961 ggacgaaaac gtcgtcgagc agcaatgacc ggctgccggt gccgcgcagt cccaacacct
     1021 cccagtcatc gacgatctcg atctccggca ttggaaccag caagtaacgg gtcgcgcgat
     1081 tgccggccgc atcctcgcag cgcgcgccga tgatggccca ttgcgaatgc aaacagccgg
     1141 aggaaaaagg aaatcgtccg ctgagccgcc aacctccggc cgcggttcgc gcggtttccc
     1201 tgggtgccag cgaggaggcg gcaaccgcca gcgggtcggc gccccagatg tcttcctgtg
     1261 cccgctccgg catgcaggcg atgatccatt gatgttcggc cagcacggcg tagacccagg
     1321 cgctggcggc gcaaccttcg gccagaattt cgatgatgcg ggagaatagc cagaagttct
     1381 cctgatgccc gccaaatcgt tgcggctgca gcagccgcag gatggtggtt cggtggaatt
     1441 cggcgatcgt ttcggaagaa atactgcgtg cggccatgac ggacgcttcg cgctcggcca
     1501 gcaccggaac catggcgcgg gcggcatcga gaaaagcagc ggaacggtcg gtcatgcggc
     1561 ggcatggttt ggcttcaggt tcggactgtc aagcacgcgt gatcggttcg tcgcgggcgc
     1621 ttcgggctag cgccagcgtc ggcctgatgc tgacacggct cggaagaaac cgatggcaag
     1681 ccggttccgg tcggctgacc gggcaggaca taccacccgt cggcgggccg cggctt
//
LOCUS       DATAVD010000503         5042 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2654468, whole genome shotgun sequence.
ACCESSION   DATAVD010000503 DATAVD010000000
VERSION     DATAVD010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5042
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2654468"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            76..1299
                     /gene="dxr"
                     /locus_tag="VHX39_09370"
     CDS             76..1299
                     /gene="dxr"
                     /locus_tag="VHX39_09370"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007399167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEX3991367.1"
                     /translation="MNPRPDQPIDGRPRTVTVLGSTGSVGTQTIDLLLGSAGEDRARN
                     DGRARFKVRALVAGRNAKLLAEQAIALGCEHAVVADPAAFPILRDALAGTGITCASGS
                     EAVVEAAERDADWTMAAITGAAGLASTLAAIRRGKAIALANKEALVCAGEVMLRAVAE
                     AGATLLPVDSEHNAIFQSMADGNHGAIERIILTASGGPFRTATLEEMARATVETALRH
                     PTWTMGAKISIDSATIMNKGLELIEAARLFGLDETKIDVLVHPQSVIHGMVCYHDGSV
                     MAQLGSPDMRIPIAHTLAWPERMATPSPRLNLAEVSRLTFEAPDLERFPALRLARDAL
                     RAGGGTPAILNAANEVAVEAFLDRRIGFLDIVETVQRVLDAMGTPSATTLEQVVALDE
                     EARQAARAFATAKAA"
     gene            1465..2577
                     /gene="rseP"
                     /locus_tag="VHX39_09375"
     CDS             1465..2577
                     /gene="rseP"
                     /locus_tag="VHX39_09375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEX3991368.1"
                     /translation="MPHLFPDLARTVAAFVVVLGVLVFFHELGHYLAARWRGVYVETF
                     SIGFGRSIAEWYDRHGTQWRISWLPLGGFVKMHGQERPEEVSDEVRASWKPGQTFHEK
                     SVLSRAIIVVAGPAANFLLAMVLFAGLFIAIGKPVTSPVVGEVLPDSAAAHAGLVAND
                     RIVAINHEPTRTFEDIQRIITAHPLATLSLTLQRDGAEQTVSVLTGSREIGGHQVGLL
                     GIRGGSVDYVPMSVPASLLGGVTQTWNVTADTFAGLAQMVSGQRGTDELGGPLRIAQL
                     SGQVAQLGVSSLISFIAVLSVNLGLINLFPIPILDGGHLLFYLFEALRGRPLPRRAQE
                     YSFRAGVAVLAGLFIFATWNDLTHIGLFRWVAGLIG"
     gene            2635..3204
                     /locus_tag="VHX39_09380"
     CDS             2635..3204
                     /locus_tag="VHX39_09380"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEX3991369.1"
                     /translation="MSVARVHPMSLTEFLAWEERQEFKYEFDGFEPVAMVGATVAHSE
                     IQRNILLALGTRLRGKPCRPHGSELKIQVVGRIRYPDAFVTCTPKANAETIITDPVVI
                     FEIISNESDHRDRITKNDEYRLTPSVQRYVMLEQDELAAMVFAREGERWIGTIHKGDA
                     VLAMPEIGIEIPLAEFYEGLDFTRSEPSA"
     gene            complement(3208..4944)
                     /locus_tag="VHX39_09385"
     CDS             complement(3208..4944)
                     /locus_tag="VHX39_09385"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX3991370.1"
                     /translation="MADQHRMPTHHPRIFGTNHMVASANYLAAQTGFEILEAGGNAID
                     AGVAAGIALGVLQCEYVHFGGVAPIMIQLADTGATVSISGLGPWPKLASAAWFREHQG
                     GRILSNIKRCVIPAAPDSWITALERYGTMTFSEVAAAAIRFGREGFGVQSISAEIIGE
                     SAASISQWPQNAAIYLPNGKPPVAGQRFFQTDLANSIQYMADQEKAAKGDRRARLNAA
                     RDAFYRGDIAQKIVAYHKANDGWIRDEDLAEFHVDVETPLAVQFGDITVHGCRPWCQG
                     PVLLQTLRILDGIDLASMGHNTPAYIHTLIEALKLAFADRHAYYGDPKFVDVPMDALL
                     SDAYNAARRARIDPARAWPEMPPPGTPAELGLTPRQMPQAIADKVYAEPEPDTSFVCV
                     IDRHGNAFAATPSDGALNTPVIPGTGIAPSSRGMQSWTDPAHPACLAPGKRPRLTPGP
                     AIARREGKWTMPFGTPGNDVQPQAMLQVFLNMAVFNMTPQQAIEQPRFASSSFPGSSD
                     PHTYTPRRMSMERRFTDETADALGRMGHDVNWWREWEWKAGCVCAVVKNEETGMLEGG
                     ADVRRPGGVRGW"
BASE COUNT          882 a         1556 c         1635 g          969 t
ORIGIN      
        1 cgacgccttg ctggccgtgg cgcctgtcgc tgcattgctg gctctcactg tcggacgagg
       61 agtagtcctg tggcgatgaa cccaagacca gaccagccga tcgatggcag gccacgaacc
      121 gtgaccgtgc ttggctccac tggcagcgtc ggcacgcaaa ccatcgatct gctgcttggt
      181 tcggcaggcg aggaccgggc gcggaacgac gggcgcgccc gcttcaaggt ccgtgctctg
      241 gtggccggac gcaatgcaaa actgctggcc gagcaggcca tcgctctggg ctgtgagcat
      301 gccgtcgtgg cggatcccgc ggccttcccg atcctgcgcg atgcgctcgc cggaaccggt
      361 atcacctgcg cctcgggatc cgaggcggtg gtcgaggcgg ccgaacgcga tgccgattgg
      421 accatggcgg cgattaccgg tgccgccggc cttgcctcca cactggccgc gatccgccgc
      481 ggcaaggcga tcgctctcgc caacaaggaa gcgttggttt gcgccggcga ggtcatgctg
      541 cgcgccgtcg ccgaggccgg ggcgacattg ttgccggtcg acagcgagca taatgccatt
      601 ttccagtcga tggccgacgg caatcatggc gccatcgaac ggatcatcct gaccgcatcg
      661 ggcggaccgt tccgcaccgc aaccctcgag gagatggcgc gcgccacggt ggaaaccgcg
      721 ctgcgccatc cgacctggac gatgggtgcc aagattagca tcgactcggc aacgatcatg
      781 aacaaaggcc tggaactgat cgaggcggcc cgcctgttcg gcctggacga gacgaaaatc
      841 gacgtcctgg tgcacccgca atcggtgatc cacggcatgg tctgttatca cgacggctcg
      901 gtcatggcgc agctcggttc gccggacatg cggatcccga ttgcccacac gctggcctgg
      961 ccggagcgga tggcaacgcc ttcgccgcgg ttgaatttgg ccgaggtcag ccgcctgacc
     1021 ttcgaagcgc ccgacctgga acgtttcccg gcgctgcggc tggcgcgcga cgcactgcgg
     1081 gccggcggtg gcacgcccgc catcctgaac gcggcaaatg aggttgcggt cgaggctttc
     1141 ctggaccgcc ggattggctt tctggatatc gtcgagaccg tgcagcgcgt gctcgacgcg
     1201 atgggcaccc cgtctgcgac gacgctggag caggtcgttg ccctcgatga ggaagcccgc
     1261 caggcagcgc gggcgtttgc caccgcgaag gcggcatgac gcaagcttta gctctgcaca
     1321 gatggacatt ctgtgctaca aatgcgtaac catgccctcc aggcagagtt gacccaccga
     1381 cctcgtgacc gcgcccaacc ggcggtcgcg cagagattgc tgaccgattt tgcaaccgag
     1441 ttgatctgaa aaaggcccga tcccttgcca catcttttcc ctgacctcgc gcgcaccgtt
     1501 gccgccttcg tcgtcgttct cggcgtcctc gtcttcttcc acgaactggg ccactacctg
     1561 gccgcccgct ggcgcggcgt gtatgtcgag acattctcca tcggcttcgg ccgcagcatc
     1621 gcggaatggt acgaccgtca cggcacgcaa tggcgcattt cctggctgcc gcttggcggc
     1681 ttcgtgaaaa tgcacggcca ggaacggccg gaagaggtgt cggacgaggt tcgcgccagc
     1741 tggaaaccgg gtcagacctt ccacgagaag tccgtgctgt cgcgcgccat catcgtggtc
     1801 gccgggccgg cggcaaattt cctgctggcc atggtgctgt ttgccggact gttcatcgcg
     1861 atcggcaagc cggtcacctc accggtggtc ggcgaggtgc tgcccgacag tgccgccgcc
     1921 catgccggac tggtagccaa cgatcggatt gtggcaatca accatgagcc gacccggacg
     1981 ttcgaggaca ttcaacggat catcaccgcc catccgctcg cgacgctaag tctgacgttg
     2041 caacgcgacg gggccgagca gacggtctcc gtgctgaccg ggtctcggga aatcggtggt
     2101 catcaggttg gacttctggg cattcgcggc ggcagcgtcg actacgtgcc gatgagcgtc
     2161 ccggcgtcgc tgctaggtgg cgtgacgcag acctggaatg tcaccgccga tacgtttgcc
     2221 ggcctggcgc agatggtgtc cggtcagcgc ggcacggacg aactgggcgg gccgttacgc
     2281 atcgctcagt tgtcggggca ggttgcccag ttgggcgttt cgagcctgat ctcgttcatt
     2341 gccgtgctgt cggtcaatct ggggctgatc aatttgttcc cgattccgat tttggatggc
     2401 gggcatttgc tgttttattt gttcgaggcg ctgcgtggcc ggccgttgcc gcgccgtgcg
     2461 caagaataca gcttccgcgc cggcgttgct gtgctcgctg ggctgttcat cttcgccacc
     2521 tggaacgatt tgacgcatat cggactgttt cgctgggtgg ccgggctaat tgggtagctg
     2581 ccgatagcgc caggccactg gattggatag aacacggtgg ccggaggcag tgacatgagt
     2641 gttgctcgag ttcacccgat gagcctgacc gaattcctgg cgtgggaaga gcgccaggag
     2701 ttcaagtacg aattcgacgg gttcgaaccc gtggcaatgg tcggcgcgac cgttgcccac
     2761 tccgaaattc aaaggaacat tctgctcgcc cttggtactc ggctgcgtgg gaagccatgt
     2821 cggccgcacg gcagcgagtt gaagattcag gttgtcggcc ggattcgtta tccagatgct
     2881 ttcgtcacct gcacgccgaa agccaacgcc gaaacgatca tcaccgatcc ggtagtaata
     2941 tttgaaatca tatcgaatga gagcgaccat cgggatcgga ttactaaaaa tgatgaatat
     3001 cgcctgacac cctcggtgca acgttacgtc atgctggaac aggacgagct ggcagcaatg
     3061 gtattcgcac gtgagggcga acgctggatt ggcacgatcc acaagggtga cgctgtgctg
     3121 gcgatgcccg agatcggcat cgaaatcccg ctggcggaat tttacgaagg gctcgacttc
     3181 acccggagcg aaccgtccgc ctgaggctta ccagccgcgc accccgcccg gacgacgcac
     3241 atcggcgcca ccttccagca tcccggtctc ctcgttcttc accacggcgc agacgcagcc
     3301 ggctttccac tcccactcgc gccaccagtt tacgtcgtgg cccatccggc ccagggcatc
     3361 ggcggtttcg tcggtgaaac gacgctccat gctcatgcgg cgaggcgtgt aggtgtgcgg
     3421 atcggatgat ccggggaaac tggaggaggc aaaacgcggt tgctcgatcg cctgctgcgg
     3481 cgtcatgttg aacactgcca tattgaggaa cacctgcaac atcgcctgcg gttgaacatc
     3541 gttgcctggc gtgccgaacg gcatcgtcca cttgccctca cgtcgggcga tggccggacc
     3601 gggtgtcagc cgaggccgct tgcccggcgc gaggcaggcc ggatgcgccg gatcggtcca
     3661 ggactgcatg ccgcgtgacg acggcgcaat gccggtgccc ggaataaccg gcgtgttcag
     3721 cgcgccatcg ctgggcgttg cggcaaacgc attgccgtgg cgatcgataa cacacacaaa
     3781 cgatgtatcg ggctcgggct cggcgtaaac tttgtcggcg atggcctggg gcatctgacg
     3841 cggtgtcagg cccagttcgg caggcgttcc gggcggcggc atttcgggcc aggcgcgcgc
     3901 cggatcgatg cgcgcccgtc gagcggcatt gtaggcgtcg cttaacagcg catccatcgg
     3961 cacatcgacg aatttcggat cgccgtaata cgcatgacgg tcggcgaaag cgagtttcag
     4021 ggcctcgatc aacgtgtgga tataggctgg tgtgttgtgg cccatcgaag caaggtcgat
     4081 gccatcgagg atgcgcaggg tttgcagcag gaccgggccc tgacaccacg gccggcaacc
     4141 atgcaccgtg atgtcgccga attgcacggc aagaggtgtc tcgacatcga catgaaattc
     4201 ggcaaggtct tcgtcgcgga tccagccatc gtttgctttg tgatacgcaa cgatcttttg
     4261 cgcgatgtcg ccgcggtaga aggcatcgcg cgccgcgtta agccgggcgc ggcgatcgcc
     4321 tttggcggct ttctcctgat ccgccatgta ctggatcgag ttcgccagat cggtctggaa
     4381 aaatcgttgg ccggcgaccg ggggcttgcc gttgggcaga taaatcgcgg cgttctgcgg
     4441 ccattggctg attgatgcgg cactttcgcc aatgatctcg gcggaaatcg attgcacgcc
     4501 gaaaccttct ctgccgaaac gaattgccgc agcggccacc tcggagaacg tcatcgtgcc
     4561 gtatcgttcc agtgcagtga tccaggagtc gggtgccgcc gggatcacac aacgcttgat
     4621 attggacagg atgcggccgc cctggtgttc gcggaaccat gcggcggagg ccagtttcgg
     4681 ccacggtccc aggccgctga tcgaaaccgt cgctccggta tccgcgagct ggatcatgat
     4741 cggtgccacg ccgccgaagt gcacgtattc gcattgcagc acgccgagag cgatgccggc
     4801 ggcgactccg gcgtcgatcg cattaccgcc ggcctccagg atttcgaagc cggtctgcgc
     4861 cgcgaggtaa ttggccgatg ccaccatgtg gttcgtgcca aagatgcgcg gatgatgggt
     4921 cggcatgcga tgctggtcgg ccatttcggt ctcctgttca ggcgtgtcgc actgttgttg
     4981 ccggcatgcc ccgccgtcat caccgggctc gtcccggtga cccgcggcac ggtgccggaa
     5041 cc
//
LOCUS       DATAVD010000504         1540 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1724319, whole genome shotgun sequence.
ACCESSION   DATAVD010000504 DATAVD010000000
VERSION     DATAVD010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1724319"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..484
                     /locus_tag="VHX39_09390"
     CDS             <1..484
                     /locus_tag="VHX39_09390"
                     /inference="COORDINATES: protein motif:HMM:NF024591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991371.1"
                     /translation="VAGEVVVRSRFIASGMWRDGAVLAGPFQQDADDPTCRVFHTGDL
                     IHLHADGLAEFVGRSDRRVKIHGLRADPNDVEAALHRIPGIADCAVVIRTSGDDTAFL
                     AYVVADGLTSSRPIRNALREDLPPHMMPAEIHLIKSNPRLPNFKPDLVALASADAALS
                     "
     gene            523..>1540
                     /locus_tag="VHX39_09395"
     CDS             523..>1540
                     /locus_tag="VHX39_09395"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF039236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX3991372.1"
                     /translation="MARAAGLDPNHWYAVAHAAAVRPGKVVETRFLDRSIALFRAVDG
                     GLGAIENRCAHRQLKLSLGEVDGCKLVCAYHGWAYDASGRLVSVAHETFGKSTERIRI
                     ASFPVRERYGLIWLFPGDAAAANATPMPEIPELERPVPWASIAIDFIWAAHHSLIIEN
                     VSDFSHAHLHRKYRPFSNAKLTDLETIGTQVRLSYDVLVGDGRFSKHFVDRSRVKVDR
                     MDLCFDYPYQWSDTDGRIKHWCFLLPMDDRTTHVFFLFYFDAVQIPLLRRPMPRGLQQ
                     LLMLAARRLLIRPLLAQDGRMVEAEQQAYDRHAQVPAHELNPAVGEFQKVIVSQWRRH
                     LALAE"
BASE COUNT          277 a          503 c          473 g          287 t
ORIGIN      
        1 cgtcgccggc gaagttgtcg tgcgcagccg gtttatcgcc agtgggatgt ggcgtgacgg
       61 cgcggtgttg gccggcccgt tccagcagga tgcggacgac cccacttgcc gcgtttttca
      121 caccggcgac ctgatccacc tccacgcaga tgggctggcg gagttcgtcg gccgcagcga
      181 tcgcagggta aagatccacg ggctgcgagc ggacccgaac gatgtcgagg ctgccctgca
      241 tcgcatcccc ggcatcgctg actgcgcggt ggtgatccga acgtcgggcg acgatacggc
      301 gttcctggcg tatgtggtgg ccgatggcct gacgtccagc cggccgatcc gaaatgcgct
      361 ccgtgaggac ctgccgccgc acatgatgcc ggccgagatc catttgataa aaagtaaccc
      421 tcggctgccc aacttcaagc cagacctcgt cgccctggca agcgccgacg ccgccctctc
      481 gtgacgactc ctagcttcga gaatgcgcga acccgaaggc agatggcgcg cgccgcgggc
      541 ctggacccga accactggta cgcggttgcc catgccgctg ccgtgcgacc tggaaaggtg
      601 gtggaaaccc gcttcctgga tcgttcaatc gcgctcttcc gcgccgtgga tggcggactc
      661 ggcgcgatcg agaaccgctg cgcacatcgc caactcaagc tttcgctggg cgaggtcgac
      721 ggctgcaagc tggtctgcgc ctatcatggc tgggcgtatg atgcctctgg ccggcttgtt
      781 tcggtggccc atgaaacgtt tggcaaatca accgaacgga ttcgcatcgc cagcttcccg
      841 gtacgcgaac gctacggcct gatctggcta tttcctggcg atgcggccgc cgccaacgca
      901 accccgatgc cggaaatacc tgaactcgag cgaccggtcc cctgggccag catcgccata
      961 gacttcatct gggccgcaca tcattcgctc atcatcgaaa acgtcagcga cttcagccac
     1021 gcccacctac accgcaagta ccggccgttc agcaacgcaa agctgacgga tctggagacg
     1081 atcgggaccc aggtgcgact cagttacgat gtcttggtgg gcgacggccg gttcagcaag
     1141 cacttcgtcg accggtcccg cgtcaaggtc gaccggatgg atctgtgctt cgattatccc
     1201 tatcaatggt ccgacaccga cgggcgtatc aagcactggt gcttccttct gccaatggat
     1261 gaccgcacga cccatgtatt cttcctgttt tacttcgatg ccgtgcagat cccgctactg
     1321 cgccgcccca tgccgcgcgg cctgcagcaa ttgctgatgc tggcggctcg gcgtttgctg
     1381 atcaggcctt tgctggcaca ggacggacgg atggtcgagg cagagcagca ggcctatgac
     1441 cggcatgccc aggtcccggc gcacgaactg aacccggcgg tcggcgaatt ccagaaggtg
     1501 attgtcagtc agtggcgccg gcacctggcg ctcgccgaaa
//
LOCUS       DATAVD010000505         2055 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3586276, whole genome shotgun sequence.
ACCESSION   DATAVD010000505 DATAVD010000000
VERSION     DATAVD010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3586276"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2055
                     /locus_tag="VHX39_09400"
     CDS             <1..>2055
                     /locus_tag="VHX39_09400"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRTAC1 family protein"
                     /protein_id="HEX3991373.1"
                     /translation="YRVGRWKQDWENGQIGGLEPLDEHVASADRPFFRDVTAAVFEHA
                     PSFREQLALGIPYWRSRLDPATGIDIYGSNGVAVGDIDGDGADEVYVCQPGGLPNRLF
                     KFREDGTLADITEVWGVGILDDTSSALFLDLRNGGRQDLIVLRSNGPVLFLNDGKRFA
                     VRTDAFQFASAPQGGFTGMAAADFDRDGKLDLYLCCYVYFQSEAQYTYATPYQDAQNG
                     PPNFLFRNRLNPDGSGFLEDCTAETGMNANNNRFSFAPAWCDYNGDGWPDLYVANDFG
                     RKNLYVNREGRFRDVAAAAGVEDIGPGMSAAWFDYDHDGNADLYVANMWTAAGQRVVH
                     DPHFGKAEAKNAYQRHTMGNSLFRNRADGTFEDATSQQQVEFGRWAWSADGVDIDNDG
                     QTEIFITCGMLTNESATDLNGFFWRQVVARSPATQQPSPAYQNGWNAINQFIREDYSW
                     NGREPNVLHVKRGDRYFDYSGVSGLDFADDSRAFAVTDFDGDGRPDIILKSRLGPQIR
                     VLQNDCAGANRSIAFELRGTKSNRDAIGARVEVDGQTKWLSAGSGFLSQHSKRVLFGL
                     GSVDMAKRVHVTWPSGAVQELSELKAGHVYSVVEGTEHIEARPFRTPRRPPALPVEAD
                     NSLRLEDTWFFEPIPLPEPKSGPGLFVLDTANPRYEIFRRYLFDWRTPLVTPLALLLN
                     ESG"
BASE COUNT          414 a          575 c          621 g          445 t
ORIGIN      
        1 tatcgggtgg gccgctggaa acaagattgg gagaacggac aaatcggcgg cctggagccg
       61 cttgatgagc atgtcgcctc cgccgatcgt ccgtttttcc gcgatgtaac agcggcggta
      121 tttgagcatg caccgtcatt ccgggagcag cttgcgctcg gcatccctta ctggcgctcg
      181 cgtctcgatc cggccacagg catagatatc tacggaagta acggggtcgc ggttggcgat
      241 atcgatggtg acggcgcaga tgaggtgtat gtctgccagc cgggcggcct gccgaatcgc
      301 ctgttcaaat ttcgtgaaga tggcacgctc gccgatatta ccgaagtttg gggcgtcggc
      361 attctcgacg acacgtcctc tgcactcttc ctcgatctcc gcaacggcgg ccgtcaggat
      421 ttgattgtgc tgcggagcaa tgggccggta ctgttcctca acgatgggaa gcgcttcgcg
      481 gttcgcaccg acgcttttca atttgcgtcg gcgccgcagg gcggattcac tggcatggcg
      541 gcggccgatt tcgatcgcga cggcaagctg gatctctatc tctgctgcta tgtctacttc
      601 cagagcgaag cgcaatacac gtacgcgacg ccttatcagg atgcacaaaa tggtccgccc
      661 aatttcctgt ttcgcaatcg gctaaatccg gacggcagcg gttttctcga ggactgcaca
      721 gccgaaaccg gaatgaacgc aaataataac cgcttcagct tcgccccggc gtggtgtgac
      781 tacaacggcg acggctggcc cgacttatat gtagctaacg atttcggccg caagaatttg
      841 tatgtgaatc gggagggccg cttccgcgat gtagcggctg ccgccggtgt ggaagacatc
      901 ggccctggca tgagtgcggc ctggttcgat tacgaccacg acggcaacgc cgatttgtat
      961 gtcgccaata tgtggactgc cgccggtcag cgcgtggttc acgaccctca ctttggcaaa
     1021 gcggaggcga aaaatgccta tcaacggcac acgatgggga attcgctgtt ccgcaatcgc
     1081 gccgacggga cctttgaaga tgcaacaagc cagcagcagg tggagttcgg ccgctgggcg
     1141 tggagcgcgg acggcgtgga tatcgacaac gacgggcaga ccgaaatctt catcacttgc
     1201 ggcatgttga ccaacgagtc cgcaaccgat ctgaatggtt tcttctggcg tcaggtggtg
     1261 gctcgctctc ccgctacgca acagccttcg cccgcttatc agaacggctg gaacgcgatc
     1321 aatcagttca ttcgcgaaga ctatagctgg aacggacgcg agccgaatgt tctccacgtc
     1381 aagcgcggcg acagatactt cgattactcg ggtgtaagtg gtctggactt cgccgatgac
     1441 agccgcgcgt tcgcggtaac cgacttcgat ggcgatggcc ggcccgacat cattctgaaa
     1501 agccgtttag gaccgcaaat ccgagttctg cagaatgatt gcgcaggggc aaaccggtcg
     1561 atcgcctttg aattgcgcgg cacgaaatcg aatcgcgacg cgatcggggc tcgcgtcgaa
     1621 gtcgacggcc agacgaaatg gcttagcgcc ggctctggat ttctgtcgca gcacagcaag
     1681 cgcgtcctgt ttggacttgg aagcgtggat atggcaaagc gcgttcacgt cacctggccc
     1741 tcaggagccg ttcaggagct ttctgaactc aaagcaggtc acgtctattc agttgttgag
     1801 ggcacagagc acatcgaagc tcgaccgttt cgtacgccac gtcggccgcc tgcgctgccg
     1861 gttgaagcgg ataacagttt acgtctcgaa gacacttggt tcttcgagcc gattccgctt
     1921 cccgagccca aatcggggcc tgggttgttc gtgctggata cggccaatcc gcgctatgag
     1981 atctttcggc gttacctatt cgattggcga acgccgctgg ttacgccgct tgcacttttg
     2041 ttgaatgagt cgggg
//
LOCUS       DATAVD010000506         6328 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2839887, whole genome shotgun sequence.
ACCESSION   DATAVD010000506 DATAVD010000000
VERSION     DATAVD010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6328
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2839887"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..611
                     /locus_tag="VHX39_09405"
     CDS             <1..611
                     /locus_tag="VHX39_09405"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX3991374.1"
                     /translation="LIGCIMGSIYAGWATPTEAASGGCLFSLILCLIWGELTWQQFKD
                     AMHRTVQICGNLLFIIYSAYIYAYAIGVAGVGESVTSWLVGLHLSHFQFFGALFVLYT
                     VLGCLVESIGMIVITVPLIYPVLGNYGIDPIWFGVILVMYVELGQISPPIGINLFVIQ
                     SIWDGELSDVVMGTIPFHVIMFALLFLLTLFPSLALWLPGQM"
     gene            complement(612..1739)
                     /locus_tag="VHX39_09410"
     CDS             complement(612..1739)
                     /locus_tag="VHX39_09410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019643920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III PLP-dependent enzyme"
                     /protein_id="HEX3991375.1"
                     /translation="MNRIDEFLHTVRPQTPCVVIDLDIVRARFRALESLFPDVSIYYA
                     VKANPAQEIITALAEMNCCFDLASPGEMERCRAAGVAAVDLSYGNTIKRERDIAAAFA
                     EGIDLFAFDSEPELAKLARAAPGARVFCRLLVRNTGAEWPLTHKFGCDQRTAIELLVR
                     ARALGLRPAGVSFHVGSQQTDPQQWETPIAHAAAIFGACARQGIALSLLNLGGGLPAQ
                     YRSPVPALERYAETVDAALTKHFASARPQVLLEPGRYMVGDAGVLRSEVVLVAERLHQ
                     GGHRWVYLDAGRYNGLAESQGEMIQYRIRTARDGEPSGTVILAGPTCDSTDIIYEHAG
                     YTLPLSLTEGDYLDFLSAGAYTSSYASVEFNGFVPVQTFCI"
     gene            complement(1736..3379)
                     /locus_tag="VHX39_09415"
     CDS             complement(1736..3379)
                     /locus_tag="VHX39_09415"
                     /inference="COORDINATES: protein motif:HMM:NF013491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HEX3991376.1"
                     /translation="MADVPPLYVILPGERLPPGGAQEVGNKAFNLMRMAASGLPVPPG
                     FVLPAAWCSLPRAAAANAEALRSALAQGITRIEAATQLRFSSARRPLLVSVRSGAALS
                     MPGMMETVLDVGLNLESVEGLVRLTGNPRLAWDSFRRLVQGFSEVVAGLAVAPFDALV
                     RDALGNAGVEHERDLDYRSLRDLTHAMLRCYQDLAREPFPLEPRTQLARAVEAVFRSW
                     DAPKAKSFRALKGIPGSVGTAVTVQTMVYGNAGAKSGAGVGFTRNPASGEREFYFDFQ
                     FNSQGEDVVAGRQVLRDNARLRTTLPEIWTQLDLACHELELLFGDAQDFEFTVQSGTL
                     WFLQSRHAKRTPWAQVRIAVDMVEEGICRPADALQGLEGIDLNLVERTFFAPPLPPPL
                     ANAQVASIGVACGAIALDTAAAKRMVEAGQPVILVRQETSTSDIDGLAVAEGVVTATG
                     GRTSHAAVVARQLSKVCLVSCPGLMVDVVGRTVQIGDRHLVEGEFLSIDGNDGAVYPG
                     LLTVVTERPERELAVIKSWRAADCIGRGPVRLTRQNANP"
     gene            complement(3372..5309)
                     /locus_tag="VHX39_09420"
     CDS             complement(3372..5309)
                     /locus_tag="VHX39_09420"
                     /inference="COORDINATES: protein motif:HMM:NF013982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HEX3991377.1"
                     /translation="MKTRILEAMGVTELQRASGLSDALAANDRVKYLFSLLQMAVSHA
                     DHPDQPAVSLKRERLAAGVDDASLDDMVATAQRRARNYQLPGAANAMQRIANEMRVMA
                     EPVIACGKPDYAERLRQLLNALPAANNDCLTAMDVTAITQAGRPKHGVPVDSLHRLVM
                     DLHKELNTQQAALAQEVLDGAAVYGLAESDRACVKAFMAGVNRTAGLKFDHPGLGTTA
                     TRAGDRLIIQNDIGTTDAHVIVIHVEALTVTVTYSDVHPERVQFLRNMLAPMNVSWDD
                     GRSAQVATLAAGMPFQLVIGSFVAADAADCLRFLEFLGSRLVFLIDWNKARKHLRGFL
                     RGPQRLDVLLWAAQQDAGHRGFLEIGGARAINQAIEATADTAMHFGDRLCDVLGTEPA
                     VEFVQFVLSTAAQGKLAGQSNALIADRIRAELQRHLSDDERRLLGVAVDHAGLIFEIA
                     SLVQDGVLAAGTGDGGFNKRADRARRFEHDADLLVVAAREAARRRPDRAVFRTLLETA
                     DDAADHLEDVAFLLVLASDHEKQGGETLDALRALTAVTLEGAQEWIKALSHAAHVTRP
                     GMREDTDDFLTAIDRVAALEHQADDAERRLTTLAIQQSKDFRQLHLYTAISNGLEETM
                     DALKHASLTLRGHVLGEVLGG"
     gene            5529..>6328
                     /locus_tag="VHX39_09425"
     CDS             5529..>6328
                     /locus_tag="VHX39_09425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991378.1"
                     /translation="MDSGELRIVSGTVIACRLFDIADSIDLAKAEALWGQQPRASITR
                     GRLVTAPSKAVAFGVAPLDIPLEPVQLQLDGTDLWAGATARLYDFGVTRLALHVPADR
                     LSWSGFTRRLISVDRHVGPTAGAAVWTRLLDHVRQTFADAMLRPTQEALEEDYLIGMV
                     RAFDEAPDAEALLRRIDLVPLLSGETRPLSDGARQDLLRQRFSWYRDDLVVITWDRAF
                     IYEPRDDSDVMDVLDVANAQLLEMRYYDQLLDAELPKMYDLVQAMQRSR"
BASE COUNT         1249 a         2004 c         1816 g         1259 t
ORIGIN      
        1 tgctgatcgg ttgcatcatg ggcagcatct atgccggatg ggcgaccccc accgaggcgg
       61 catccggcgg ctgcctgttt tccctgatcc tgtgcctgat ctggggcgag ctgacctggc
      121 aacaattcaa agacgccatg caccgcaccg tgcaaatatg cggcaatctg ctgttcatca
      181 tttactcggc gtatatctat gcctatgcga tcggtgtggc gggtgtcggc gagagcgtca
      241 cttcctggct ggttggtctg catctgtcgc attttcagtt cttcggcgcg ctgtttgtgc
      301 tttacacggt actgggctgc ctggtggaga gcatcggcat gatcgtcatc accgtgccgc
      361 tgatttatcc ggtgctgggg aattacggca tcgatccgat ctggttcggt gtgattctgg
      421 tgatgtacgt tgaactcggc cagatctcac cgccgatcgg gatcaacctg ttcgtcattc
      481 aaagcatttg ggatggggaa ctgagcgatg tcgtgatggg aacgatcccg tttcatgtca
      541 tcatgttcgc actgctgttc ctgcttacgc tctttcccag tctcgcactt tggttacctg
      601 ggcaaatgtg atcatataca gaaggtctgc accggaacga agccgttaaa ctccaccgac
      661 gcatagctcg aagtataagc gccggctgac agaaagtcta aataatcgcc ctccgtcaga
      721 ctgagcggca gcgtatatcc ggcatgctca taaatgatgt cggtactgtc gcaggtcggg
      781 ccggcgagaa tgaccgtccc tgagggctcg ccgtcgcgtg ccgtgcggat acggtactgg
      841 atcatttcac cttggctttc cgccaatccg ttataacggc ccgcgtcgag ataaacccac
      901 cggtgtccgc cctgatgcag acgttcggca accagcacaa cctcactgcg caacacgccg
      961 gcgtcgccga ccatgtagcg gccaggttcc agcaatacct gcggccgtgc cgatgcaaaa
     1021 tgtttggtca gcgctgcgtc gaccgtctcg gcataccgct ccaacgcggg caccggcgaa
     1081 cggtattgcg ccggcaaacc gcctcccaga ttgagcagcg atagcgcgat gccctgtcgc
     1141 gcacaggcgc caaaaatcgc cgcagcgtgg gcaatgggtg tctcccattg ctgcgggtcg
     1201 gtctgctgcg aaccgacatg aaacgacacg ccggccggac gcagaccaag cgcacgagcc
     1261 ctgaccagaa gctcaatcgc ggtccgctgg tcgcagccga atttatgggt caatggccat
     1321 tccgcgccgg tattgcgcac caggaggcga caaaacacgc gtgcccctgg ggcagcacgg
     1381 gccagttttg caagctcggg ttcggaatcg aaggcaaaca gatcgatgcc ttcggcaaac
     1441 gctgcggcga tatcgcgttc ccgcttgatg gtattgccat acgacaaatc caccgccgcc
     1501 acgcccgcgg cacggcatcg ttccatctct cctggacttg ccaaatcgaa acaacaattc
     1561 atctcggcca atgcggtaat gatctcctgg gctggattgg ccttcactgc gtaataaatc
     1621 gacacatcag ggaacagtga ctccaacgca cggaagcgag cccgcacgat gtccaggtca
     1681 atgacaacgc atggcgtttg tggtcgaacc gtatggagga attcgtcgat ccggttcaag
     1741 gatttgcatt ctgtctggta agccggacgg ggccgcggcc gatgcaatcg gccgctcgcc
     1801 agcttttgat cacggccaac tcccgctcgg gccgttccgt taccactgtc aggagcccag
     1861 ggtagaccgc gccgtcatta ccgtcgatcg acagaaattc gccttcgaca aggtgccggt
     1921 cgcctatctg caccgtcctt cccaccacat ccaccatcaa tcctgggcag gataccaaac
     1981 aaactttgct gagttgcctc gccaccaccg cggcgtgcga cgtgcgtcca ccggttgctg
     2041 ttaccacgcc ctcggccacc gccaacccgt caatgtcgga ggtcgatgtc tcctgcctca
     2101 ccaggatcac cggttgacct gcttccacca tgcgctttgc cgcagctgtg tccagcgcga
     2161 tcgctccaca tgccacgccg atgctggcga cctgagcatt cgccagcggc ggcggcaacg
     2221 gtggtgcgaa aaacgtacgt tccacaaggt tcaggtcaat tccttccagc ccctgcaacg
     2281 cgtccgcggg ccggcaaatg ccttcctcga ccatatcgac cgcgatgcgg acctgcgccc
     2341 acggtgtgcg tttggcgtgg cgggactgga ggaaccagag cgtgccggat tgcacggtaa
     2401 actcaaagtc ctgcgcgtca ccgaacaaca gttccagctc gtggcacgcc aggtcgagtt
     2461 gcgtccagat ctcgggcaac gtggtacgca acctcgcatt gtcacgtagc acctggcggc
     2521 ccgcgaccac gtcttcacct tggctgttga actggaaatc gaaataaaac tcccgctcac
     2581 cactcgcggg atttcgggtg aatccgacgc cggcaccgga ttttgcaccg gcattgccat
     2641 agaccatcgt ctgaacggtc accgcagtgc caacgctccc tggaatgccc ttcagcgcgc
     2701 gaaagctttt tgcttttggc gcatcccagg aacgaaacac cgcctccaca gcgcgcgcca
     2761 attgcgtacg cggttccaaa gggaatggct ccctcgccaa atcctggtag catcgcagca
     2821 tcgcgtgggt caggtcgcgc aacgaacgat aatccagatc acgctcgtgt tcgacgccgg
     2881 cattgcccag ggcatcgcga accagagcat caaacggggc aaccgccaat cctgccacta
     2941 cctcggagaa cccctgcacc agacgccgaa aactgtccca ggccaggcgc ggattgcctg
     3001 tgagacgaac cagcccttcg accgactcaa ggttgagccc gacatccaac acggtctcca
     3061 tcatgccggg catcgataat gccgcaccgg aacgaactga caccagcaat ggacggcgcg
     3121 cggaggaaaa cctcagttgc gttgcggctt cgatgcgggt gatgccttgc gccagagcac
     3181 tacgcaacgc ctcagcgttg gctgcggctg cacgcggcag gctgcaccat gccgccggca
     3241 acacaaaccc cggaggcacc ggcagccctg acgccgccat tcgcatcaaa ttgaacgcct
     3301 tattgccaac ctcctgcgcg ccgccgggcg gcagcctttc gcctggcaga atgacataaa
     3361 gcggcggaac gtcagccacc gagcacctca ccgagcacgt gaccacgcag cgtcaggctg
     3421 gcgtgtttca gtgcatccat ggtctcctca agtccattgc tgatggctgt gtaaagatgc
     3481 aattggcgga aatccttcga ctgctggatt gccaatgtgg tcaggcgccg ctcggcgtcg
     3541 tccgcctgat gttccagggc ggcaacgcgg tcgatcgcgg tcagaaagtc gtcggtatct
     3601 tcacgcatgc caggacgggt gacgtgagcc gcgtggctga gtgccttgat ccattcctgc
     3661 gcgccttcca gggttacagc agtcagtgca cgcagcgcat ccaatgtctc gccgccttgt
     3721 ttctcgtgat cggacgcgag gaccagcaga aaagccacgt cctcgagatg atcggctgcg
     3781 tcgtcagcgg tctccagcag cgtgcgaaac acggcgcgat cgggccgtcg gcgggccgcc
     3841 tcacgtgcag ccacaaccag aagatcggcg tcatgttcga agcggcgggc gcgatcggca
     3901 cgcttattga atccgccatc gccggttccg gcagccagca cgccatcttg caccagcgag
     3961 gcaatctcga agatcaggcc ggcgtgatcg acagcaacac ccagaagacg acgctcgtca
     4021 tcgctcaaat gccgctgcag ttcggcccgg atacgatccg cgatcaaagc gttcgattgc
     4081 cctgccaatt ttccctgtgc cgcggtgctc aacacgaact ggacgaattc aaccgctggc
     4141 tcggttccaa gcacatcgca caagcgatca ccaaagtgca ttgccgtatc ggcggtcgcc
     4201 tcgatcgcct gattgatcgc gcgcgccccg ccaatttcca gaaagccgcg atggccggcg
     4261 tcctgctgag cagcccagag cagtacgtcc aggcgttgtg gaccccgcag aaagccacgc
     4321 agatgcttgc gggctttgtt ccagtcgatc agaaacacca accgggaacc gagaaattcc
     4381 agaaatcgaa ggcaatccgc ggcatctgcc gccacaaacg aaccgatgac caactgaaac
     4441 ggcatcccgg cggccaacgt tgcgacctgc gccgagcgtc cgtcatccca ggagacattc
     4501 atcggcgcca gcatattgcg caggaactga acccgttccg gatgaacatc gctgtaagtg
     4561 acggtgaccg tcaacgcctc aacatggatc acgatgacat gggcatcggt ggttccgata
     4621 tcgttctgga taatcaaccg atcgccggcg cgcgtcgcgg tcgttcccaa accaggatga
     4681 tcgaatttca gcccggccgt tcggttcaca cccgccatga acgccttgac acaggcccgg
     4741 tcggattccg ccaggccata gactgcggcg ccatccagca cctcctgcgc cagcgcggcc
     4801 tgttgcgtat tcagctcttt gtgcaggtcc atgaccagcc ggtgcaagct gtcaacaggc
     4861 accccatgct tcggccgacc cgcctgagtg atcgccgtga catccatggc ggtcagacaa
     4921 tcgttgttcg ccgcaggcaa cgcgttcaac agctgtcgca accgctcggc gtagtctggc
     4981 ttaccgcaag cgatgaccgg ttccgccatg acccgcatct cgttggcgat gcgctgcatg
     5041 gcattggcgg cgccgggcaa ctggtaattg cgcgctctcc gctgcgcggt tgccaccatg
     5101 tcatccaggc tggcgtcatc gaccccggcc gcaagtcgct cgcgtttcag gctgacggcg
     5161 ggctggtccg gatgatcggc gtggctcact gccatttgca gcagcgaaaa caggtatttt
     5221 acccgatcgt tggcggccag cgcatcgctc aaccccgagg cacgttgcaa ttccgtcacg
     5281 cccattgctt caagaatgcg ggttttcatg atgctcgttc caggatcgcc ggttttgtta
     5341 tcggcccgcg tgagccgcgc gcacattgac ctgtgtcaag gctcgccgtc catcgctgca
     5401 aggttgcagc atcatgacga ttgactgtca taaattcgtc atcgaatttg aggtcggctt
     5461 tgttcccagg tctaccatcg gggaaatctc ggctaaacct gaattggacg catacagggc
     5521 atgggccaat ggactccgga gaattgcgga tcgtatcggg cacggtgatc gcgtgccggc
     5581 tgttcgacat cgccgactcg attgatctgg cgaaggcaga ggctctttgg ggtcagcaac
     5641 cgcgcgcgag catcacacga ggcaggttgg ttaccgcccc atcgaaagcg gtggcattcg
     5701 gggttgcacc gctggacatc ccgctcgagc cggttcagct gcaactggac ggcaccgatc
     5761 tctgggctgg cgcaaccgcc cggctttacg acttcggcgt cacccggttg gcgctgcacg
     5821 tcccggcgga tcgtttgtcc tggtcaggtt tcacccggcg tctgatttcg gtcgatcgtc
     5881 atgtcgggcc caccgccggc gccgcagtgt ggacccggct gctcgatcat gtacggcaga
     5941 cgtttgccga tgccatgttg cgtcccacac aggaagccct ggaggaagac tatctcatcg
     6001 ggatggttcg cgctttcgat gaggcgcctg acgccgaggc tttgctgcgg cgtatcgatc
     6061 tggtgccgct gttgtccggt gaaacacggc ctttgtcgga cggtgcccgt caggatttgt
     6121 tacgccagcg cttctcctgg taccgtgacg atctggtcgt gatcacctgg gaccgcgcct
     6181 ttatctacga accgcgcgat gactccgatg tgatggacgt tctggacgtc gccaacgcgc
     6241 aattgctgga aatgcgctat tatgatcagc tgctcgacgc cgaactgccg aaaatgtacg
     6301 atttggtgca ggcgatgcaa cgttcgcg
//
LOCUS       DATAVD010000507         1960 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3212135, whole genome shotgun sequence.
ACCESSION   DATAVD010000507 DATAVD010000000
VERSION     DATAVD010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3212135"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..1215)
                     /locus_tag="VHX39_09430"
     CDS             complement(13..1215)
                     /locus_tag="VHX39_09430"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX3991379.1"
                     /translation="MRIAKIEDLHCNAGWRDFSFLKITTDDGLIGWSEFMENFGAEGL
                     STVIARLGERLIGMDPRPVEKITAFLHGLTRQTPYGINQQAIAAIENALVDIKAKSLN
                     IPVYELLGGPIRDRLRLYWSHCGTWRVSFADRIKQWTGYDPIRSLADVERAGAEVAER
                     GFKGLKTNIMRFDLDPPVIHMPGFNAPGWPECNIDKPLIDALRAELGAFRRGAGPGVG
                     LHLDLNFNFKTEGYIRLAQALEEFELVWLEVDSYNPEALATIRRSSRTPVASLESLYG
                     RRQFRPFLEHQSVDVAIIDVAWNGILESYKIAAMCDAYEVNVAPHNFNGHIGSLMSAH
                     LCAAIPNFRVMEIDIEDVPWKDDLVTAVPKIENGELLLPTGIGWGAEVNEDVIKAHPP
                     LRPVKWRT"
BASE COUNT          392 a          567 c          588 g          413 t
ORIGIN      
        1 gccgtcacca gttcaggtgc gccatttaac cgggcgcaac ggcgggtgcg ctttgatcac
       61 gtcctcgttg acctcagcac cccagccgat tccggtcggc agcagcaatt cgccgttttc
      121 aatttttggc accgccgtca cgagatcgtc tttccacggc acgtcttcga tatcgatctc
      181 catgacacgg aaattcggga ttgcggcgca caggtgcgcg ctcatcaacg atccgatatg
      241 accattgaag ttgtgcggtg cgacgttcac ttcataagcg tcgcacatgg cggcaatctt
      301 gtaggactcc agaatgccgt tccaggccac atcgatgatg gcgacgtcga ccgactgatg
      361 ttccaggaag ggacggaact ggcggcggcc atacagcgat tccagcgacg ccaccggcgt
      421 gcgcgaactg cgccggatgg tcgccagcgc ttcaggatta taactgtcga cttccagcca
      481 gacgagttcg aattcttcaa gcgcctgagc caaacgaata tagccctcgg tcttgaaatt
      541 gaaattgagg tcgaggtgta gtccgacgcc gggacctgcg ccgcggcgga aggcgcccag
      601 ttcggcgcgc aacgcatcga tcagcggctt gtcgatgttg cattccggcc agccgggagc
      661 gttgaagccc ggcatatgga tcaccggcgg gtcgagatcg aaacgcatga tattggtctt
      721 aaggcccttg aaaccgcgtt cggcaacctc ggcgccggcc cgttccacgt cggccagaga
      781 acggatcggg tcgtaaccgg tccattgttt gatacgatcg gcgaaactga cgcgccacgt
      841 gccgcagtgc gaccaataca gccgcagccg atcgcggatc ggtccgccca atagttcgta
      901 gacaggaatg ttcagcgatt tggctttgat atcgacaagc gcgttctcga tcgcggcgat
      961 tgcctgctgg ttgataccgt atggtgtttg ccgcgtcagg ccgtgcaaaa atgctgtgat
     1021 tttctccacc gggcgtgggt ccatgccgat caggcgttcg cccagtcgag caatgactgt
     1081 ggaaaggcct tcggcgccga aattctccat gaactcggac cagccgatca ggccgtcgtc
     1141 ggtggttatt ttcaggaagg agaaatcgcg ccaaccggcg ttgcagtgca ggtcttctat
     1201 tttggcaatt cgcacggcgt ttcctccgtt ttgggtgggt cggcagcggg caacaggcgg
     1261 gactatgacg aacctattcc tggagcatcg cggtcgcgtc aagggacggt agcagtggac
     1321 accgcattcg agctcgcgtg acggcggttg gtgggaactt gcgaacgctc gtgccttggg
     1381 accgttccat ttaactctga gtgcgcggag gaagcggaga acgcgggtgc gggtcatttc
     1441 gctgacatga aacgagtacc gctgtagcgt aacgaactca gctattgacg gaactgtcga
     1501 accgggaacg cgctcgtgcg ggcgcacgtc gcaaatgcgt taaatcctgg cctggtatgc
     1561 ggcacgtcgg tacgcgaacc atcacacgga cgtctgttcg ttggctattt cgtcccgtta
     1621 actctttgtt gataattttg tgctttaaac cgtcaccgtt cagggcgggc atccccacct
     1681 gccggatgcg aacgcgtgac gtgtgcggac agcggttaaa caacctcgcc aatgaaaccg
     1741 ttcgccttgc acggcagcaa tcgtggcctc cgtcgggcga cacatcgttg ccggcgtcaa
     1801 actgatttca gggagcatcg tagatgccag ggcgccgtgt tcacgattga cccaacaaca
     1861 tgaatgccct cgcgcgtacc gaccggccaa cccgtgaccc ggccttgccg atccgagtga
     1921 tccggcggct cgcccagagg ttgccgtcaa ttctgaaacc
//
LOCUS       DATAVD010000508         2772 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_795234, whole genome shotgun sequence.
ACCESSION   DATAVD010000508 DATAVD010000000
VERSION     DATAVD010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2772
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_795234"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..353)
                     /locus_tag="VHX39_09435"
     CDS             complement(<1..353)
                     /locus_tag="VHX39_09435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991380.1"
                     /translation="MADTGYSVFAPFARGPLQSGPAVPSRVDQSVLRIDEARCDHKFT
                     LAPLPPQLVKRSVEPAKDPSTRRTKIWEFSQNLHCSIIGTCLSTAELRQTLTRLSLAQ
                     NDWTDHDLHHKAVSLA"
     gene            complement(417..1850)
                     /locus_tag="VHX39_09440"
     CDS             complement(417..1850)
                     /locus_tag="VHX39_09440"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEX3991381.1"
                     /translation="MYPDVQLYIDGAWTDAAAGRKLVVLNPATGEPAGKLAHAERADL
                     DRALEAAEKGFHIWRKISAYDRSKVMRKAADLLRSRADTIAPYLTQEQGKPLPEAKGE
                     VMAGADVIDWFAEEARRAYGRVIPARGEGVYQLVVKEPVGPVAAFTPWNFPINQVVRK
                     VSIALAAGCSIIVKAPEETPAAPAELIRCFADAGVPAGVINLVYGVPSEISEYLIPHP
                     IIKKMSFTGSTAVGKQLAALAGLHMKRVTMELGGHAPAIVFDDADVDVASRLLAGAKF
                     RNAGQVCVSPTRFLIQEKVYEQFVESFVGHAKALKVGNGLEASTNMGPMANPRRIAAM
                     EMFIGDAAQKGAAVRTGGNRIGNNGNFFEPTVLTDVPKDARVMHEEPFGPLAVISPFS
                     GFDEVVTEANRLPYGLASYAYTRSAKTANAIASAVESGMIAINHQGLALPEVPFGGVK
                     DSGYGSEGGLEAMEGYLNTKFVTQAGL"
     gene            complement(1941..>2772)
                     /locus_tag="VHX39_09445"
     CDS             complement(1941..>2772)
                     /locus_tag="VHX39_09445"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX3991382.1"
                     /translation="SPDIGGSRASMGMMVAEVLGIPSHRVKATVADTASIGFTHVTGG
                     SRVTFATGMAATQAAEKVREDLKKRAAMIWEIPVEAVEWKDGKAFPAGSNAGAFDPID
                     LPGIALKAAKTGGPISSEVSLNAQGAGAGFGIHVCDVSVDKETGHVTIERYTAFQDVG
                     KAIHPSYVEGQIQGGAVQGIGWALSEEYIYNAKGQLDNPGFLDYRCPVASDVPMIEAV
                     LVEVPNPRHPFGARGVGEVPIVPPMAAIGNAIRSATGLRMPDLPISPPKLRAALDAAE
                     "
BASE COUNT          502 a          876 c          862 g          532 t
ORIGIN      
        1 gcgaggctga ccgctttgtg atgcaggtcg tgatcggtcc agtcgttctg cgccaggctg
       61 agccgggtca gggtctggcg cagttcggcg gtcgagagac acgttccaat gatcgaacaa
      121 tgcaagttct ggctgaactc ccagatcttg gtgcgacggg tcgaggggtc tttggcaggt
      181 tcaaccgagc gcttcacaag ttgcggcggt aatggcgcca aggtgaactt gtggtcgcag
      241 cgcgcttcat cgatccgaag gacggactgg tcgacccggc tcggcaccgc tggaccgctt
      301 tgcagcggac ctcgcgcaaa cggtgcgaaa accgaatatc ccgtgtccgc catggaacga
      361 ccactgttct gtgatggcga gcccggaggc agcgtctgcc tctgggctgc gccaggttaa
      421 agtcccgcct gagtaacaaa cttggtgttg agataccctt ccatcgcctc gaggccgcct
      481 tccgagccat agccggagtc tttcacgccg ccgaacggca cctcgggcag cgcaaggccc
      541 tggtggttga tggcgatcat gccgctttcg actgccgagg cgatcgcatt ggcggtcttg
      601 gcggaacgcg tataggcgta cgacgcaagg ccataaggca gccggttcgc ttccgttaca
      661 acctcatcga agccgctgaa cggggagatc acggccagcg gaccgaacgg ttcctcgtgc
      721 atgacgcggg cgtctttcgg cacatcggtc agcacggtcg gttcgaagaa gttgccgttg
      781 ttgccgatcc ggttgccgcc ggttctgacc gcggcgccct tttgtgccgc atcgccaatg
      841 aacatttcca ttgcggcaat gcgccgaggg ttcgccatcg gacccatgtt ggtcgacgct
      901 tccagaccgt tgccaacttt gagcgccttg gcatggccga cgaacgattc gacgaactgc
      961 tcgtatacct tctcctggat caggaaccgc gtgggtgaca cgcagacctg cccggcattg
     1021 cggaatttag cgccggcgag cagccggctg gcgacatcga catccgcgtc atcgaacact
     1081 atggccggag catggccgcc cagttccatg gtgacgcgct tcatgtggag accggcaagg
     1141 gcggcgagtt gtttgccgac cgcggtcgaa ccggtgaacg acatcttttt gatgatcgga
     1201 tgcggaatga gatattccga gatctcggac ggcacgccgt agaccagatt gatgactccg
     1261 gccggcacgc ccgcatcggc gaagcagcgg atcagttcgg ccggtgcagc gggcgtttct
     1321 tccggtgcct taacgatgat cgagcatccc gccgccagcg cgatggaaac tttcctcacc
     1381 acctgattga tcgggaaatt ccatggcgtg aacgccgcca ctgggccgac cggttccttg
     1441 acgaccaact ggtagacacc ctcgccccgg gcggggatga cgcggccata ggcgcggcgg
     1501 gcttcctcgg caaaccagtc gatgacgtcg gcaccggcca tcacctcgcc tttggcctcg
     1561 ggcagcggct tgccttgttc ctgcgtcagg tatggcgcaa tggtgtcggc ccgggagcgc
     1621 aacagatcgg cggctttgcg catgaccttc gagcggtcat acgcggaaat cttgcgccag
     1681 atgtggaaac ccttctcggc cgcctccagg gcacggtcga gatcggcacg ctcggcatgg
     1741 gcaagcttgc cggcgggttc gccggtggcg ggattgagca caaccagctt gcggccggcg
     1801 gcagcgtcgg tccacgcgcc atcgatgtag agttgaacgt cggggtacat ggtcgtctcc
     1861 tgagactaag gggcaggctt tgaaggaaac gccgcctccc ggaactcatc cgtttcggat
     1921 gagttgcggg agctgagact tcactcggca gcgtcaagtg cggcgcgcag ttttggcggc
     1981 gaaatcggca gatccggcat gcgcaaacct gtggcggaac gaatggcgtt gccgatcgct
     2041 gccatcggcg gaacgatcgg cacctcaccc acgccgcgcg cgccgaacgg atggcgcgga
     2101 tttggcacct ccaccagcac cgcctcgatc atcggtacat ccgatgccac tgggcaacga
     2161 taatccagga acccgggatt atcgagctgg cctttggcgt tgtagatgta ctcttcgctc
     2221 aatgcccaac cgatgccttg caccgcaccg ccctggatct gaccctcgac gtaactcgga
     2281 tggattgcct taccgacatc ctggaacgcg gtatagcgct cgatcgtgac gtggccggtt
     2341 tccttgtcga cactcacatc gcacacatgg ataccaaagc ccgcgccggc gccttgtgcg
     2401 ttaagcgaca cttccgagct gatcggtccg ccggtcttcg ctgccttcag cgcgataccc
     2461 ggcaggtcaa tcggatcaaa cgcgccggca ttggagcccg ccgggaacgc cttgccgtcc
     2521 ttccactcca ccgcctcgac cggaatttcc cagatcatgg cggcgcgctt cttcaggtcc
     2581 tcgcgcacct tttcggctgc ctgggttgcc gccatgccgg tcgcaaaggt cacccgcgaa
     2641 ccaccggtca catgggtaaa gccgatggag gcagtatcgg ccaccgtcgc cttcacccgg
     2701 tgcgacggga tgccaagcac ttcggccacc atcatcccca tcgacgcacg agacccgccg
     2761 atgtccggac tg
//
LOCUS       DATAVD010000509         1655 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_49382, whole genome shotgun sequence.
ACCESSION   DATAVD010000509 DATAVD010000000
VERSION     DATAVD010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49382"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(159..404)
                     /locus_tag="VHX39_09450"
     CDS             complement(159..404)
                     /locus_tag="VHX39_09450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991383.1"
                     /translation="MYGRSKGSIWSHPVNDTRLTAAANHNVLEPGFDGPEGLPPGGLL
                     PGDPLPGPPVVVPGGVPGADGPGAFLNILRMNDLIAR"
     gene            403..639
                     /locus_tag="VHX39_09455"
     CDS             403..639
                     /locus_tag="VHX39_09455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991384.1"
                     /translation="MWHATGVNEQNIAAMAANPADLVHGRDAPRRRVVLESDGVNRLW
                     TGKQLPLLSDTPGASASSGSSTGGGSGAPTGGGS"
     gene            643..>1655
                     /locus_tag="VHX39_09460"
     CDS             643..>1655
                     /locus_tag="VHX39_09460"
                     /inference="COORDINATES: protein motif:HMM:NF018290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose synthase operon protein YhjQ/BcsQ"
                     /protein_id="HEX3991385.1"
                     /translation="MPPEDGRLNLAAVVPPADQNAGRHDRPTLVAFLTDRESENALRE
                     GLSEATSETLDVRRGGIRVAIGIMQKSATPRVLVVDISGEEQPLSALSELAHVVEPDV
                     CVLVVGEVEHADFYREITRGLGAAEYLSKPLTRDKVLRHFGPYGQGSSLATPAMLGGR
                     AIAVTGVRGGVGATTIAVNLAWHFGVGMRRHTVLLDPDTHLGSTAFLLNIQPGPGLRM
                     ALESPDRIDSLLAERAAIPAADRLHVLAAEEKIASQASHAEGAGAALLTALRNRYNFI
                     IVDVPFAPVPLFRDLLDLVDQRILVMDPSLAAIRDTVRLLGLPKGPGQDQRAVIVLNR
                     NGMP"
BASE COUNT          289 a          524 c          527 g          315 t
ORIGIN      
        1 caccccgatc ctggttcgtc cggtgcagaa catggcgcaa ttgcacacgc cggccgacgg
       61 ctaccaggtg cctggcgaca tcgatcggtt gttgctgaat cgtcaagtac cgaaccgcaa
      121 tggaacagtc ggagcggcac cttccggtgc ggcagggttt atcgtgcgat gaggtcattc
      181 atgcgcaata tgttcaaaaa ggcgcctggc ccgtcggcgc cgggaacacc tccgggcacg
      241 acaaccggag gtccgggcaa cggatcgccc ggcagcagac caccaggcgg caagccttca
      301 ggcccatcga agcccggctc cagaacgtta tggttcgctg ccgcggtcag cctggtgtcg
      361 ttgaccggat gcgaccagat cgatcctttg gagcgcccat acatgtggca cgccaccggg
      421 gtcaacgagc agaacattgc ggccatggcc gccaatcctg ccgacctcgt gcacgggcgc
      481 gatgcgccgc ggcgccgggt ggtccttgaa tcggatggcg tcaatcgcct ctggaccggc
      541 aaacaactgc cgctgctcag cgatactccg ggtgcatccg ccagcagcgg cagctctacg
      601 ggcggcggct ccggcgctcc aaccggcggg ggatcgtaac tcatgcctcc tgaagatgga
      661 cgtttaaatc tggccgcggt tgttccgcca gcggatcaga atgccggccg ccacgatcgc
      721 ccaacgctgg tggcgttcct gaccgatcgc gagtcggaga atgcactccg cgaaggtctg
      781 tcggaagcaa ccagcgaaac gctcgatgtg cgtcgcggcg gcattcgtgt cgcgatcggg
      841 atcatgcaga aatctgcaac cccacgcgtg ctcgtcgtcg atatttctgg cgaagaacaa
      901 ccgttgagcg cgttgagcga actggctcat gtcgtcgaac ccgatgtttg cgtgttggtc
      961 gtcggtgagg tcgagcacgc cgacttctat cgcgaaatca cgcgcggtct gggcgcggcc
     1021 gaatatctca gcaagccgct cacgcgcgac aaggtgttgc ggcatttcgg tccctacggg
     1081 cagggcagct cattggccac gccggcgatg ttgggcggtc gggcaattgc agtaaccggc
     1141 gtgcgcggcg gtgttggggc aacgacgatt gcggtcaacc tggcctggca tttcggcgtc
     1201 ggtatgcgcc gtcacaccgt tctgctggat cccgacacgc atcttggctc cacggcgttt
     1261 ctgttgaata tccagcctgg tccaggcctg cgcatggcgc ttgaatcgcc cgaccgtatc
     1321 gacagccttc tggccgagcg tgcggcgatc ccggcggccg accggctgca cgttctcgca
     1381 gccgaagaaa agatcgcctc ccaggcgagc catgccgagg gtgccggtgc cgcgcttctg
     1441 actgcattgc gcaaccgata taatttcatc atcgtcgatg tgccgtttgc gcctgtgccg
     1501 ttgttccgcg atctgcttga tctcgtggat cagcgcattc tggtgatgga tccttcgctc
     1561 gcggcgatcc gcgataccgt gcggctgctc ggtctgccga aaggtcccgg tcaggaccag
     1621 cgcgcggtca tcgtcctcaa ccggaacggc atgcc
//
LOCUS       DATAVD010000510         2558 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3024864, whole genome shotgun sequence.
ACCESSION   DATAVD010000510 DATAVD010000000
VERSION     DATAVD010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2558
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3024864"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            165..803
                     /locus_tag="VHX39_09465"
     CDS             165..803
                     /locus_tag="VHX39_09465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991386.1"
                     /translation="MAKGLLFASFDTSPAQADEFNDWYDLEHVPERMRVPGFLNGQRW
                     IGEENPKIAVATYDLETHAVMNSPEYQAIGGANGSVWTKRITAIAKRILRFEGTQILP
                     GDVTGPAEANALLAVAIDVEPAIEAEFNEWYNSEHLPQLGAVPGVLAARRFHAAGAGV
                     EKKYLALYHLTSPNVSRSPAWSKAANTPWTEKMRPHFRQPLILRCKKFVRNG"
     gene            807..2009
                     /locus_tag="VHX39_09470"
     CDS             807..2009
                     /locus_tag="VHX39_09470"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3991387.1"
                     /translation="MRRISRRQAMVLASFAPLATPAIAQTKQTPGVTATEILLGQTMP
                     YSGPASGYAPIGHVEVAFTDFINDQGGINGRKIKLLSLDDGYSPPKTLEQTRRLVEEE
                     NVAFIYQQLGTPTSMATRRYLNQKQIPQLFVASGATQFGDRDNFPWTMGWQISYQIEG
                     HVYARYVMSEKPDAKIAILYQNDDSGKDFLKGFKDGLGDKVRQIAAAVSYEPTDPTVD
                     SQVVQLQSSGADTLFAASIPKVTATALRKVREMAWNPLYIIASVGASVSSGLAPAGLD
                     KAIGLVTGAYLKDPSDPQWADDPGFKDWLTFMKKYQPNGDLTDGSNVYGYSVTQTLAV
                     TLKQCGEDLSRDNVIRQAANLDIELPMLHRGIRFHTTPTDYYGMKKMRLQRFDGKAWV
                     PFGEPIGV"
     gene            2061..>2558
                     /locus_tag="VHX39_09475"
     CDS             2061..>2558
                     /locus_tag="VHX39_09475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3991388.1"
                     /translation="MPDYDLVIAGGTVVTPADMFRADIGITGGLVQAIGFGLNGARTL
                     DANGMLVMPGGVDTHCHIEQLRADGSTDEETFVTGSTSALAGGTTSVITFSIQFKGQG
                     ISAPLAEYRRLAASSMVDYSFHQIITDASDDVIFREVPEVVASGIRSLKVFLTYDPLH
                     LDDRQF"
BASE COUNT          569 a          768 c          745 g          476 t
ORIGIN      
        1 attccgggca tgatgggtaa tttggccccg cgttcgggtt cggtctggaa ggccatgagg
       61 attcctcgat gtcgttgatc tcggtcatgc cgcaaagcaa cacggctggc aaccgagcgg
      121 gccgcgtggc agaattgcag caacccgccc atgaggaggc accaatggcc aaaggcctgc
      181 tgttcgcgtc gttcgacacc tcacccgccc aggcagacga gttcaacgat tggtacgacc
      241 tggaacatgt gccggaaaga atgcgcgtgc cggggttcct caacgggcaa cgctggatcg
      301 gcgaggagaa cccaaagatc gctgtcgcca cttacgatct ggaaacccac gcggtgatga
      361 acagcccgga atatcaggca attggcggcg ccaatggctc ggtctggacg aaacgcatca
      421 cggcgatcgc gaagcgcatc ctgcggttcg agggcacgca gatcctcccg ggcgatgtca
      481 ccggaccagc cgaagcgaac gccttgctgg cagttgcaat cgacgtcgaa ccggccatcg
      541 aggctgaatt caacgaatgg tacaactcag aacatctgcc gcagctcggt gcggtgccgg
      601 gcgtgctggc cgcgcgacgg ttccacgcag ccggcgccgg ggtcgagaag aagtaccttg
      661 cgctgtatca cctgacctcg ccgaacgtat cgcgatcccc tgcgtggtcg aaggctgcca
      721 acacgccttg gaccgaaaaa atgcgtcctc acttccgcca gccgctgatc ctgcgctgca
      781 agaaatttgt gcggaacggc tgaccgatgc gcagaatttc ccgtcgtcag gcgatggttc
      841 tggcgagctt tgccccgctc gcgacacctg ccatcgcgca gacgaagcag acgcccggtg
      901 taaccgcgac tgaaattctt ctgggccaaa ccatgccgta cagcggaccg gcctccggct
      961 acgcgccaat cggccatgtc gaagtcgcct ttaccgactt catcaatgat cagggcggca
     1021 tcaacggccg caagatcaaa cttttatcgc tcgatgacgg ctacagcccg ccgaaaacgc
     1081 tggaacagac ccgccggctg gtcgaagaag agaacgtggc gttcatctat cagcagctcg
     1141 gcacgccgac ttcgatggcg acacggcgct acctcaatca aaaacagata ccgcaactgt
     1201 tcgtcgcctc gggtgccacg cagttcggcg accgtgacaa ctttccttgg acgatgggtt
     1261 ggcagatcag ctaccagatc gaagggcacg tttacgcccg ctacgtgatg agcgaaaagc
     1321 ctgacgcaaa gattgcgatt ctgtaccaga acgacgactc cggcaaagac tttctcaaag
     1381 gcttcaaaga cggactgggc gacaaagtcc gccagatcgc cgccgcagta agttatgagc
     1441 ccacagatcc aacggtcgac tcccaggtcg tgcagctgca aagttccggc gcagatacat
     1501 tgtttgctgc cagcataccg aaggtcacgg ccacggcatt gcggaaagtc cgcgaaatgg
     1561 cgtggaaccc gctttatatt atagcaagtg tcggtgcctc ggtctcctcc ggactggcac
     1621 ctgcggggtt ggacaaggcg atcggcctcg tcactggcgc ctatctgaag gacccatcgg
     1681 acccacaatg ggcggatgat ccggggttca aggactggct gacgttcatg aagaagtacc
     1741 agcccaacgg cgatctgacc gatggcagca acgtgtatgg ttacagcgtg acacaaacac
     1801 tcgccgtcac cctgaaacag tgtggtgaag atctgtcgcg ggacaacgtc attcgccagg
     1861 ccgcgaattt ggatatcgag ctgccgatgc tgcacagagg catccgcttc cacaccacgc
     1921 cgaccgatta ttatggaatg aaaaagatgc gattgcagcg gtttgacggc aaggcctggg
     1981 tgccattcgg cgaaccgatc ggcgtctgaa tggcgaccca ctaccgccta aaatcattgg
     2041 cgcacgaagg gacctgatcg atgcccgatt atgacctggt cattgccggc ggcacggttg
     2101 taacaccggc cgatatgttc cgagccgata tcgggattac aggtggcctg gtgcaggcga
     2161 tcggcttcgg cctgaacggc gcccgcacgc tggatgccaa cggaatgctg gtgatgccgg
     2221 gcggcgtcga cactcactgc catatcgagc aactgcgcgc ggacggcagc accgacgagg
     2281 aaaccttcgt caccggcagc acctccgctc tggcaggagg taccaccagt gtcattacat
     2341 tctcgatcca gttcaaaggc cagggcatca gtgcgccgtt ggccgagtat cgccgtctcg
     2401 cagcctcatc catggtcgat tatagcttcc accagatcat taccgacgcg tccgatgatg
     2461 taattttccg cgaagtacct gaagtggtcg catcgggcat ccggagtctg aaagttttcc
     2521 ttacctacga ccctttgcat ttggatgacc ggcagttc
//
LOCUS       DATAVD010000511         2024 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3586614, whole genome shotgun sequence.
ACCESSION   DATAVD010000511 DATAVD010000000
VERSION     DATAVD010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2024
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3586614"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..735)
                     /locus_tag="VHX39_09480"
     CDS             complement(<1..735)
                     /locus_tag="VHX39_09480"
                     /inference="COORDINATES: protein motif:HMM:NF039910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX3991389.1"
                     /translation="MTNAVESLELTRVGPGTPMGNMMRQYWLPALGAPEVVAGGDPVR
                     LMLLGEKLIAFRDASGKVGVMDHRCPHRCASLFYGRNEGDGIACVYHGWKFNTDGACL
                     VQPNLPPEQEFRDKVHAKTYKVREQAGVIWVYMGEREQAPPMPAIEAALLPDAEVNVT
                     FTQRECNWLQALEGDIDTSHFSWLHVGSVQPEQVQDDNWVKYQVVHRAPEYEVTDTDW
                     GTMYCAMRPAENEQTYWRFAHFAFPFW"
     gene            869..1252
                     /gene="hpxZ"
                     /locus_tag="VHX39_09485"
     CDS             869..1252
                     /gene="hpxZ"
                     /locus_tag="VHX39_09485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxalurate catabolism protein HpxZ"
                     /protein_id="HEX3991390.1"
                     /translation="MQVNLPEVKAEVEAAFARYETALMANDVDTLQSLFWNSPHTIRY
                     GIGEILYGWDEIGAFRSARSAVGLARVISRTVITTFGRDFATASTLFHRASTPAKVGR
                     QQQSWARFDDGWHIVAAHVSVIDGA"
     gene            complement(1249..1803)
                     /locus_tag="VHX39_09490"
     CDS             complement(1249..1803)
                     /locus_tag="VHX39_09490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991391.1"
                     /translation="MTTFGRYAELPISEMTDAQRAGYRHLVDGPRGRLPGPYKVWVHN
                     PQLVHAASPMGTHFTPGQSSLTEREREIAVVVITSQWKSDYPNAAHEKRAKEVGLPAD
                     AVEAIIGGRPTSFADAREQAVYEVSLALANNHIIAQGLYDKAVSVLGHERITDMIVLM
                     GYYTAVSLTMNFYAVPAGTPGMAR"
BASE COUNT          371 a          674 c          598 g          381 t
ORIGIN      
        1 ccagaacggg aacgcgaaat gggcgaaacg ccaataggtc tgctcgttct cggccggtcg
       61 catggcgcaa tacatcgtgc cccagtcggt gtcggtcacc tcgtactcgg gggcgcggtg
      121 cacgacctgg tacttgaccc agttgtcgtc ctgcacctgc tcgggctgca cgctgccgac
      181 atgcagccaa ctgaaatgcg aggtgtcgat gtcgccctcc agcgcctgca accagttgca
      241 ctcgcgttgg gtgaacgtga cgttcacctc ggcgtcaggc agcaacgccg cttcgatcgc
      301 cggcatcggt ggggcctgct cgcgctcgcc catataaacc cagataacgc cggcctgttc
      361 gcgcaccttg taggttttgg cgtggacctt gtcgcggaat tcctgctcgg gcggcaggtt
      421 cggctgcacc aggcaggcgc cgtcggtgtt gaacttccag ccgtgataaa cgcaggcgat
      481 cccatcgccc tcattccggc cgtaaaacaa tgaggcacag cgatgcgggc accggtggtc
      541 catgacgccg accttgccgc tggcatcgcg gaacgcgatc agcttttcgc caagcagcat
      601 caggcgcacc ggatcgccac cggcaacaac ctccggggcc cccagcgccg gcagccaata
      661 ctgccgcatc atgttgccca tcggcgtgcc aggtccgacc cgcgtcagtt cgaggctttc
      721 aacagcgttg gtcatacgta cctccagatt ttcccttggc cgcttgtcta ttgtcagtat
      781 gccaccacga aagcggcctg ccgtcgagac cttccccacc gaaccggcct cgtgcgagaa
      841 ccgcggccca gaaaccatgg atcacccgat gcaagtcaac ctgcccgagg tcaaagccga
      901 ggtcgaagcc gccttcgccc gctacgaaac cgccctgatg gcgaacgatg tcgatacgct
      961 gcaatcactg ttctggaaca gccctcacac catccgctat gggatcggcg agatcctgta
     1021 tggctgggac gaaatcggcg cctttcgctc ggcgcgatcc gcggtcggac tggcgcgggt
     1081 catttcgcgc acggtgatca cgacttttgg ccgcgacttc gccaccgctt ccaccctgtt
     1141 ccaccgcgcc tccacaccag ccaaagtcgg tcgccaacaa caatcctggg cgcgcttcga
     1201 cgacggctgg cacatcgtcg ccgctcacgt cagcgtgatc gatggcgctt aacgggccat
     1261 cccgggcgtg ccggccggca ccgcatagaa attcattgtt agcgagacgg ccgtgtaata
     1321 gcccatcagc acgatcatgt cggtgatccg ctcgtggccg agcaccgaaa cagccttatc
     1381 gtaaagcccc tgcgcaatga tgtgattgtt cgcgagagcc aatgacacct cgtacaccgc
     1441 ctgctcgcgc gcatcggcga acgatgtggg cctgccgccg atgatcgcct cgaccgcgtc
     1501 ggccggcagc ccgacctcct tggcgcgctt ttcgtgcgct gcgttgggat agtccgactt
     1561 ccattggctg gtgatcacca ccacggcgat ttcccgctcg cgttcagtca gcgacgactg
     1621 gccgggcgta aagtgcgttc ccatcggcga ggccgcgtgc accagttgcg ggttatgcac
     1681 ccagaccttg taaggcccag gcaaccgccc gcgcggcccg tcgaccagat gacgatatcc
     1741 ggcgcgttgg gcgtcggtca tttcggagat cggcagttcc gcatagcggc caaaggtggt
     1801 catggtgttc ctcctgacgt caggtctggt tcactgcgcc gcgcccgtgc gttggtcaac
     1861 cgcgtcgatc catggcacag tccgatccag agcaaagcag cggaggaacc catgcaaggc
     1921 gtcgtgtttc atggcgaacg tgaactggaa atcatgaatt tccccgatcc gaacccaggt
     1981 ccgggtgagg tcgtgatcga gatgaaagcc tccggcatgt gcgg
//
LOCUS       DATAVD010000512         2258 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2840348, whole genome shotgun sequence.
ACCESSION   DATAVD010000512 DATAVD010000000
VERSION     DATAVD010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2258
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2840348"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..565)
                     /locus_tag="VHX39_09495"
     CDS             complement(<1..565)
                     /locus_tag="VHX39_09495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEX3991392.1"
                     /translation="MLGLERFFGSSNDRKLRPMQKRVARINALESQFHAMPDDALRAM
                     TAAFRERLAKGETLEDLLPEAFAVVREAAMRTLGQRHFDVQLMGGIVLHEGRIAEMKT
                     GEGKTLVATLAVYLNALAGEGVHVVTVNDYLASRDADWMGQIYRFLGLTVGCIVHGLD
                     DDQRKQAYACDVTYGTNNEFGFDYLRDN"
     gene            747..2030
                     /gene="argJ"
                     /locus_tag="VHX39_09500"
     CDS             747..2030
                     /gene="argJ"
                     /locus_tag="VHX39_09500"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HEX3991393.1"
                     /translation="MAKAGKTAQTPSKAAAGAHSVSPLAPKIFAMLPPLAGVRLATGE
                     AGVRYKHRPDVLLVTLASGTQVAGVFTRSRTASAPVDWCKAQMKAGTARALVVNSGNA
                     NAFTGKAGLEGARAVAQAAAAMLDCRAQEVMMASTGVIGEPLPAERITKIMGELAQRG
                     DASGWRAAAEAIMTTDTFPKMATASAEIDGKRVTINGIAKGSGMIAPDMATMLSFVFT
                     DANLPASVLQDMLSAGTKTSFNAITVDSDTSTSDTLLLFATGKGARHAPVSKSADRSL
                     TDFRKKLDAVLLDLALQVVKDGEGAQKLIQIDVAGAESDDAAKRIALAIANSPLVKTA
                     IAGSDANWGRIVMAVGKAGEKADRDRLKISFGGQVVAENGTRAVHYDEAAATRAVSGH
                     SVEIAVDLGLAKGKARVWTCDLTHGYIDINGSYRS"
     gene            2085..>2258
                     /locus_tag="VHX39_09505"
     CDS             2085..>2258
                     /locus_tag="VHX39_09505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEX3991394.1"
                     /translation="MEAFKTPLVIVIAVALIDADGRVLIAQRPPGKAMAGLWEFPGGK
                     LEAGERPEETLICE"
BASE COUNT          457 a          670 c          736 g          395 t
ORIGIN      
        1 tgttgtcgcg aagataatcg aacccgaact cgttgttggt gccgtaggtc acgtcgcagg
       61 cataggcttg cttgcgctga tcgtcgtcga ggccgtgcac gatgcagccg acagtcaggc
      121 cgaggaagcg atagatctgg cccatccagt ccgcatcgcg cgacgcgaga taatcgttca
      181 cggttacgac gtgcacgcct tcgccggcga gagcattgag atagaccgcc agcgtcgcaa
      241 ccagcgtctt gccttcgccg gttttcattt cggcgatgcg gccttcgtgc agaacgatgc
      301 cgcccatgag ctgcacgtcg aaatggcgtt ggccgagcgt gcgcatggcc gcttcgcgta
      361 cgaccgcaaa ggcttcagga aggaggtcct caagcgtctc gcccttggcg aggcgttccc
      421 tgaacgcagc cgtcatcgcc cgcaatgcgt cgtccggcat cgcgtggaat tgggattcga
      481 gtgcgttgat ccgggccacg cgcttttgca tgggccgcag cttgcggtcg ttggaggagc
      541 cgaaaaaacg ctcaaggcct aacatcaata tcctctggcc gcaggtggcc gggttaagct
      601 cgcgaggggc aaaccccggc gaacgcacag tgattcggcg ccctgattgg gtcatcgaaa
      661 ggccggcgag agataagaac gaggctcccc cttgtcaatt cgggctttcc cgcctaatcc
      721 gcgcggccga attagggatc gggaccatgg caaaggcagg caagacggcc cagacgccct
      781 caaaagcggc ggctggcgcc cattctgtct cgccgctggc tcctaaaatc ttcgcaatgc
      841 tgccgcccct ggccggtgtc cggctggcta cgggcgaggc gggcgtgcgc tacaagcacc
      901 gcccggacgt cctcctggtc acgttggcgt cgggaactca ggtcgcgggg gtctttaccc
      961 ggtccagaac ggcctcggcg cccgtcgact ggtgcaaggc acaaatgaag gccggaactg
     1021 ccagggcgct ggtggtcaac agcggcaatg ccaacgcatt taccggaaag gccggattgg
     1081 agggggcgcg ggcagtggcg caggccgccg ctgcaatgct ggattgccga gcccaggagg
     1141 tcatgatggc gtccacgggc gtcattggcg agccgttgcc ggcagagcgc atcacaaaga
     1201 tcatgggcga actggcgcaa cgcggcgatg ccagcggttg gcgggccgct gccgaagcga
     1261 tcatgaccac cgataccttt ccaaagatgg cgaccgccag cgcggagatc gacggcaagc
     1321 gcgtcaccat caacggtatc gccaaaggtt cgggcatgat tgcgcccgat atggcgacga
     1381 tgctgagctt cgtgttcacc gacgcaaatt tgccggcgag cgttctgcag gacatgttgt
     1441 cggccggaac gaaaacatcg ttcaacgcga taacggtgga cagcgacaca tcgaccagcg
     1501 acacgctgct gctgttcgca acgggtaaag gcgccaggca cgccccggtt tccaaatcgg
     1561 ccgacagatc gcttaccgac ttccgcaaga agctggatgc cgtgctgctc gatcttgcgt
     1621 tgcaggtcgt gaaggacggc gagggcgcac agaagctgat acagatcgac gtcgcaggcg
     1681 cggaaagcga cgatgccgcc aagcgcatag cgctggcgat cgccaactcg ccgctggtca
     1741 aaacagccat tgccggcagc gacgcgaatt ggggtcgaat cgtgatggcc gtcggcaagg
     1801 ccggcgaaaa agcagatcgc gatcggctga aaatatcctt tggcggtcag gtggtcgccg
     1861 aaaacggcac gcgtgccgtg cactacgacg aagccgctgc aacccgcgct gtttcggggc
     1921 atagcgtgga gatcgccgtc gatctcggcc tcgccaaagg caaagcccgc gtgtggacct
     1981 gcgacctcac ccacggctat atcgacatca acggctccta ccggagctga cgataggggg
     2041 gcatccctcc aatgttaatt ggtgcttaag cagagttccc ggttttggaa gcttttaaga
     2101 ccccccttgt tatagtgatt gcggttgctc tcatcgacgc ggacggaagg gtgctgatcg
     2161 cccaacgtcc gcccggaaag gcgatggcgg ggttatggga atttccaggc ggaaaactgg
     2221 aggctggcga gcggcccgaa gaaacgctga tctgcgag
//
LOCUS       DATAVD010000513         3651 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_235358, whole genome shotgun sequence.
ACCESSION   DATAVD010000513 DATAVD010000000
VERSION     DATAVD010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3651
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_235358"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(234..773)
                     /locus_tag="VHX39_09510"
     CDS             complement(234..773)
                     /locus_tag="VHX39_09510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4167 domain-containing protein"
                     /protein_id="HEX3991395.1"
                     /translation="MNMKRMRGRNHRSGGGGGGGGSGGGGGGGMRHHATGGGIPLNRN
                     HVFDSNGPDIRVRGTAQQLFEKYLQLGRDATSGGDRVMAEGYLQYAEHYFRVLNLMNQ
                     AAAQQGQGGGQGNGQGGGQMNGHQGGGQQRYRQGYQNGEEAQQMANPEPEEAEIRAPG
                     MGDQPEAREIPITTTPPEE"
     gene            complement(991..1857)
                     /gene="prmC"
                     /locus_tag="VHX39_09515"
     CDS             complement(991..1857)
                     /gene="prmC"
                     /locus_tag="VHX39_09515"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEX3991396.1"
                     /translation="MTEVAGATAAPTIAEALRSGAQVLAGAGVDSPRLESRLLLAHAL
                     GRSAEDLIRDLSATAPPSNFVTLITRRASHEPLAFILGWREFWSLRFRVSNATLIPRP
                     DSETVVEAALAACPDVQAPIRVLDLGTGTGCLLLAVLRERPNAFGVGIDRFEAAVQLA
                     LSNAHDLGLAGRSVFFCADWAEPIDSRFDLVLSNPPYIATAELAGLMPEVALHEPPTA
                     LDGGACGLTAYRAIIAALPRLLAPSGVAVLELGEGQFDAVGKIAAAAGFRVDARRDLA
                     GITRVIILHTSP"
     gene            complement(1854..3014)
                     /locus_tag="VHX39_09520"
     CDS             complement(1854..3014)
                     /locus_tag="VHX39_09520"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003620275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEX3991397.1"
                     /translation="MDELVAHPVIEHTHVRFDDGIMLECGVKLASNTVAYRTYGTLNA
                     AKTNAVLICHALTLDQYVAEKSPVTGKPGWWDLVVGPGRPVDTDRFFVICANVLGGCM
                     GSTGPLELKPDGSGERWGIDFPAVTILDMVHAQKQLIDHLGIERLFAVLGGSIGGMQV
                     LQWVATYPDAVFAALPIATAAYHSAQNIAFHEVGRQAIFADPNWADGQYWKTGRIPAQ
                     GLAVARMCAHITYLSEEALTRKFGRRLQNAPKRPAEAIALFGEMFEVESYLHHQGSTF
                     VDRFDANSYVTITRAADYFDLAANYQDDLANAFRGTKTRFLLASFTSDWLYPTAESRS
                     IARALNRAGANVSFVEFPTDKGHDAFLLDEPDFLRTLAGFLRGCAVHAGLAV"
     gene            3172..3384
                     /locus_tag="VHX39_09525"
     CDS             3172..3384
                     /locus_tag="VHX39_09525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010512615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapB family
                     antitoxin"
                     /protein_id="HEX3991398.1"
                     /translation="MRTNIEIDDALMNEAMAATGLPTKKATVEEALRRLVRRHQRLAA
                     LDDMAGLGWEGDLDAMRRGRDFTAGS"
     gene            3462..>3651
                     /locus_tag="VHX39_09530"
     CDS             3462..>3651
                     /locus_tag="VHX39_09530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991399.1"
                     /translation="MLETDDQVLVGDLILLEVLQGARDEAHAARLERDLRCYPVAPML
                     NDLIAVQAAQHYRSLRANG"
BASE COUNT          651 a         1121 c         1193 g          686 t
ORIGIN      
        1 gaatggaagg cgtttcgtgc cgggaagaat gtcgtttcga aaattggaaa atcgtggccg
       61 ggacgggggc ccccggccct cgcggtgcca ggccggagct cacgcgctga cctggttgtg
      121 cgatgcagcg aatccgttac agcaaggcag cgatgggccg accgaaacgg cgacgtattg
      181 ccggaccgta agcacggcct caacgcgcgt caacgcgcta cggccaggtg gcatcactct
      241 tcgggaggcg tcgtggtgat ggggatctcg cgcgcctcag gttggtcgcc catgcccggg
      301 gcgcggattt ccgcctcctc aggctccggg ttcgccatct gctgcgcttc ttcgccgttc
      361 tggtagcctt ggcgatagcg ttgttggccg ccgccctggt ggccgttcat ttggccgcca
      421 ccttgtccgt tgccctgtcc gccgccttga ccctgctgcg cggccgcctg gttcatcaga
      481 ttaagcacac ggaagtagtg ttcagcgtat tgcagatagc cctcggccat cactcgatcg
      541 ccgccgctgg tggcgtcgcg gcccagttgc aagtattttt cgaacagttg ctgggccgtg
      601 ccgcggactc tgatgtccgg gccgttgctg tcgaatacgt ggttgcggtt gagcggaatg
      661 cccccgcccg tagcgtgatg gcgcattccg ccaccgccgc caccaccact accacccccg
      721 ccgccacccc cgccggagcg gtggttgcgg ccacgcatgc gtttcatgtt catactgttg
      781 ccgtcgtgct ttcccgttgt gcgcggcatg tgggtcccgc cttcatgggg gacccgaggg
      841 attgtccctc ggccaaccgc aattgatcgg cgttgctagc gtattgccct ggcctaagcg
      901 aaaaccctgg gcggtcagac gctgccgcgt atcgcggctc ggtctacgta tcacactatc
      961 ccggttacat ggtggtgcca atgggtattt tcagggggag gtgtgaagaa ttatcacccg
     1021 tgtgattcct gccaggtccc gccgggcatc gacccgaaaa ccggccgctg cggcgatctt
     1081 gccgaccgcg tcgaactgac cttcgccgag ctccagcacc gccacgccgg agggagccaa
     1141 aagccgcggt agtgcggcaa tgatcgcacg ataagccgtt aaaccgcatg ctccaccatc
     1201 caacgcagtc ggcggttcat gcaacgcgac ctccggcatc aggccggcaa gctccgctgt
     1261 tgcgatgtag ggcggattgc tcagcaccag gtcgaatcgg ctgtcgatcg gctcagccca
     1321 gtcggcgcaa aagaatacgg accggccggc cagaccaaga tcgtgggcgt tgctgagcgc
     1381 gagctgcact gccgcctcga atcggtcgat tcccacgcca aatgcgttgg gtcgctcgcg
     1441 cagcactgcc agcaacaggc aacccgtgcc ggtgcccaga tccaacaccc gaatcggcgc
     1501 ctgaacgtca ggacaagccg ctaacgctgc ctcgaccacg gtctcgctgt cgggccgcgg
     1561 gatcagggtt gcattggata cgcggaaccg caggctccag aattcccgcc aaccgagaat
     1621 gaacgccaac ggctcatgcg aggcgcgccg ggtgatcagc gtcacgaagt tggacggagg
     1681 ggcggtggcg gaaagatcgc ggatcaggtc ctcggccgac cggcccaaag catgggcaag
     1741 cagcagccgg gattcaaggc gtgggctgtc gacgcctgcc ccggccagca cctgggcgcc
     1801 gcttcgcaac gcttcggcga tggtcggggc ggcggtcgcc ccggcaacct cggtcaaacg
     1861 gcaagccccg cgtgcaccgc gcagccacgc aggaacccgg ccagggtgcg gaggaaatcc
     1921 ggctcatcga gcaggaatgc gtcgtggccc ttgtcggtcg ggaattccac gaacgacacg
     1981 ttggccccgg cgcggttgag ggcacgggcg atcgaccgac tctcggcggt cggatacagc
     2041 cagtccgacg tgaacgacgc cagcaggaac cgcgttttgg taccgcggaa ggcgttcgcc
     2101 aggtcgtctt gatagttcgc cgcgagatcg aagtaatccg ctgcccgggt aatcgtcaca
     2161 tatgagttgg cgtcgaaccg gtcgacaaag gtgctgccct gatggtggag gtaactctcc
     2221 acctcgaaca tttcgccgaa cagagcgatc gcttcggccg gccgcttcgg cgcattttgc
     2281 agtcggcggc cgaatttgcg ggtcagcgct tcctcggaca gataagtgat atgggcgcac
     2341 atccgggcca ccgccaggcc ctgggccgga atccgcccgg tcttccagta ctggccgtca
     2401 gcccagttgg ggtccgcgaa aatggcctgg cggccgactt cgtggaaggc aatgttctgt
     2461 gccgagtgat acgcagcggt ggcaatcggc agcgccgcga agacggcgtc cgggtaggtc
     2521 gcgacccact gcagcacctg catccctccg atcgagcccc cgagcacggc gaacagccgc
     2581 tcgatcccca ggtggtcaat cagctgtttc tgcgcgtgca ccatgtcgag gatggtgacc
     2641 gccgggaagt cgatgcccca gcgctcgcct gagccgtcgg gcttgagttc cagcgggccg
     2701 gtcgatccca tgcagccgcc gaggacattg gcgcagatga cgaagaagcg gtcggtgtcg
     2761 acaggccggc ccggcccgac cacgaggtcc caccagccgg gcttgccggt aaccggagac
     2821 ttttcggcca cgtattggtc gagggtcagg gcgtggcaga tcaataccgc gttggttttg
     2881 gctgcgttga gggtgccgta ggtgcggtag gcgacagtgt tgctggccag tttgacgcca
     2941 cactccagca tgatcccgtc atcaaaacgg acgtgggtgt gctcgataac cgggtgtgcg
     3001 acgagttcgt ccatggcgcg gttgaaatag gacggcaacg acggcatcgc aatggttggg
     3061 ggcgggtgcg ccatcgggtt gggtcaaatc atcgcaaggg tctgaagcca tggacaatcg
     3121 gcttctgtta tgtgtagaat ttgccaattc catacacatc acgaggtttc catgcgtacg
     3181 aacattgaaa tcgatgatgc gctcatgaat gaagcgatgg cggctaccgg attgcctacc
     3241 aagaaggcga ccgttgaaga agcattacgt cgccttgttc gccgccatca acggctggcc
     3301 gcgctcgacg acatggcggg ccttgggtgg gaaggtgacc tggatgcgat gcggcgaggg
     3361 cgggatttca cggctggctc gtgattgtcg ttgatagttc ggtttggatc gcgaatctcc
     3421 gcggtcaatc tgacctggct gtccagaaac ttcgatcgct cgtgcttgag accgacgatc
     3481 aggttctcgt tggtgatctg atattgctgg aggtgcttca aggtgcccga gacgaagccc
     3541 atgccgcgcg gctcgaacgg gacctcaggt gctatccggt ggcgccaatg ctcaatgacc
     3601 tgatcgcggt ccaggccgcg cagcattatc gcagtttgcg tgccaatggt t
//
LOCUS       DATAVD010000514         3330 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3399567, whole genome shotgun sequence.
ACCESSION   DATAVD010000514 DATAVD010000000
VERSION     DATAVD010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3330
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3399567"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            95..250
                     /locus_tag="VHX39_09535"
     CDS             95..250
                     /locus_tag="VHX39_09535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991400.1"
                     /translation="MAHQPTVFRGPDTEEAFFADKMRFWGGVNKAIVGTLVFMIVLLV
                     GMAVFLL"
     gene            303..1175
                     /locus_tag="VHX39_09540"
     CDS             303..1175
                     /locus_tag="VHX39_09540"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX3991401.1"
                     /translation="MPQPDNPLRGIALSASACAVFAVADTTSKYLSTNLPIIEIQWIR
                     YMLFLGMAATLAARAPGRSLRPHNPKLQIVRGLCVTGSSVLFVYGIREMTMAQATTIS
                     FLSPLLITVLSIPLLGEIVGIRRWAAVLAGMAGMLIVVRPGTGGFQPAAMFGVASSSC
                     WALALIITRKIAASDEPRTTILWSALVGAVVLTVLLPFEAKWPSWWQLGLCLMLGLLS
                     SAGQWLVVLAHRLAPASLLAPISYTQLPWVCIGGYVVFDNLPDQWTLVGATIIIASGL
                     YTAHRERIRARVLP"
     gene            1270..2244
                     /locus_tag="VHX39_09545"
     CDS             1270..2244
                     /locus_tag="VHX39_09545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3991402.1"
                     /translation="MPPLLDISDLHTEFRTGAGVVRAVDGVSYTVDAGETVAVVGESG
                     SGKSVTALSVLRLIPDPPGRITAGSVSFAGRDLLTLSEPEMREIRGGEIGMVFQEPMT
                     SLNPVLTVGRQITETLEQHRRLDHATAAKRAEALLVQVGIAEPVRRLKQYPHQLSGGM
                     RQRVMIAIALACDPKLIIADEPTTALDVTIQAQILELMKALTRDRGIALIIITHNLGV
                     VARYADRVNVMYAGRIVECGPAAEIYHEPRHPYTVALLRSVPRLDRPRQARLDPVEGQ
                     PPDLTRLDGGCAFRPRCRLADEACAVARPALTPVGSDGHFAACFKAAA"
     gene            2241..3239
                     /locus_tag="VHX39_09550"
     CDS             2241..3239
                     /locus_tag="VHX39_09550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3991403.1"
                     /translation="MSEPLLTVPPLLSVRGLRMHFPVTEGIVRRRVTGEVKAVDGIDF
                     TVARGETLGLVGESGCGKTTTGRCILRLERPTDGEIIYDGTNIATLDGTALREYRQRI
                     QVIFQDPYSSLNPRMKIGEIIAEPMYVHGIEPNPEKRDARVRELLSVCGLNPNFADRY
                     PHEMSGGQRQRVGIARALAMNPEFIVCDEPVSALDVSIQAQVVNLLEDLREKFGLTYL
                     FIAHDLSVVRHLCQRVAVMYLGRIVEMADSDALFDAPLHPYTRALMAAVPVPDPTVEQ
                     GRDFQPVKGEVPSPMNPPSGCVFHPRCPVAVPRCSQQRPEPREIRPGHIVACDEVR"
BASE COUNT          571 a         1012 c         1043 g          704 t
ORIGIN      
        1 acggcggcac tgctcaaccc gacgccgctc ttgccctttg caacgggcct gccataaacc
       61 tgcggccaac attccacact tgctgaggcg atttatggct caccaaccta ccgtgttccg
      121 cgggcccgat accgaggaag cgtttttcgc ggacaagatg cgtttctggg gcggggtcaa
      181 caaggcgatc gtcggcacgc tggtcttcat gatcgtgctg ctggttggga tggcagtgtt
      241 cctgctgtag tcgcatcgct tccctcgccg tttcgggtcg ggccggccgc gccagtttgg
      301 tggtgccgca acccgacaat ccgctgcgtg gaatcgcgct gtccgcctct gcgtgcgccg
      361 tgttcgcggt ggctgatacg acgtccaaat atcttagcac caacctgccg attattgaga
      421 tccagtggat ccgctacatg ctgttcctcg gcatggccgc aactctggcc gcgcgtgcgc
      481 cgggtcggtc cctgcggccg cacaatccga aattgcagat cgtgcgcggg ctgtgcgtga
      541 ccggcagttc ggtgctgttc gtttatggca tccgcgaaat gaccatggcc caggcgacga
      601 cgatcagctt tttgtcgccg ttgctcatta ccgtgctgtc gattcctctg cttggtgaaa
      661 ttgtcggcat ccggcgatgg gcggcggtcc tggccggcat ggccggcatg ctgatcgtgg
      721 tgcggcctgg caccggcggg tttcaaccgg cggcaatgtt cggcgtcgcg tcctccagtt
      781 gttgggcatt ggcactgatc atcacccgca aaattgccgc atccgacgaa ccgaggacca
      841 cgatcctgtg gtcggccctg gtcggcgcgg tcgtgctgac cgtcttgcta ccgttcgagg
      901 caaaatggcc cagttggtgg caactcggtc tgtgcctgat gttggggttg ttgtcgtcgg
      961 cgggacagtg gctggtcgtg ctggcgcacc gtctggcgcc ggcttcattg ctggcaccaa
     1021 tcagttatac gcaactgccc tgggtctgta tcggcggcta cgtcgtgttc gacaatttac
     1081 ccgatcaatg gaccctggtc ggcgcgacga tcatcattgc cagcggactg tatacggcac
     1141 accgcgagcg gatccgggcg cgggtgctgc cgtgaaaccc gcctggcgtt ttgccctgtt
     1201 gacagcgtct cgctccgtca cctaccacgt ctgtcaaaat aatggcttca tcgagagaac
     1261 gaccaaccct tgcctccact tctggatatc agcgacctgc acaccgaatt tcgcaccggt
     1321 gcaggtgtcg ttcgcgcggt tgacggcgtc agctataccg ttgatgccgg agaaaccgtg
     1381 gccgtggttg gtgaaagcgg gtctggcaaa tcggtcaccg cgctttcggt tctgcggctg
     1441 atacccgacc cgccgggtcg catcactgca ggctcggtca gcttcgccgg ccgcgatctg
     1501 cttacattgt ccgagcccga aatgcgcgag atccgcggcg gtgaaatcgg gatggtgttt
     1561 caggagccaa tgacctcact gaacccggtg ctgacggtcg gccgccagat caccgaaacg
     1621 ctggagcaac atcgcagact cgatcacgcc acagcggcaa agcgtgccga ggcattgctc
     1681 gtgcaggtcg gtattgctga gccggtgcgg cgtctgaagc aatatccgca ccagttgtcc
     1741 ggcggcatgc ggcaacgtgt catgatcgcc atcgcgttgg cctgtgaccc gaaactgatc
     1801 atcgccgacg agccgacgac cgctctggac gttacgattc aggcacaaat actggaattg
     1861 atgaaagcgc tgacgcggga tcgcggcatc gctttgataa tcatcacgca caatcttggc
     1921 gtcgtggcgc gctatgccga ccgcgtgaac gtcatgtatg cgggccgcat cgtggaatgc
     1981 ggaccggcgg cggaaatcta tcacgaacct cggcatcctt acaccgttgc tctgctgcgc
     2041 tcggtgcctc ggctggatcg tccgcggcag gcgcgactcg atccggtgga gggacaaccg
     2101 cccgatttaa cccggctcga tggcggttgc gcgtttcgcc cgcgctgccg tctggccgat
     2161 gaggcctgcg ccgtcgcccg accggctttg accccggttg gcagcgacgg ccatttcgct
     2221 gcgtgcttca aggcggccgc atgagcgaac cgctgctgac cgtgcccccc ttgctaagcg
     2281 tcaggggcct gcggatgcat tttccggtca ccgaaggcat tgtccgccgg cgggtcaccg
     2341 gtgaggtgaa ggccgttgac ggcatcgact tcacggttgc acgcggcgaa accctgggcc
     2401 tggtcggtga gagcggttgc ggcaagacca ctaccggacg ctgcattctg cgtctggagc
     2461 gtccgaccga tggcgaaatc atctacgacg gcacgaatat tgcgaccttg gacggcacgg
     2521 cgctgcgcga ataccggcag cgcatccagg taatttttca ggatccctac agctcgctta
     2581 atccacgcat gaagattggt gagatcatcg ctgaaccgat gtacgtgcat gggatcgagc
     2641 cgaatccgga aaaacgcgac gcgcgggtgc gcgaattgct atcggtctgc ggcctcaatc
     2701 cgaacttcgc cgatcgctac ccgcacgaaa tgtccggtgg tcagcgacaa cgggtcggca
     2761 ttgcgcgggc actggcgatg aaccccgaat ttatcgtgtg cgatgagccg gtttccgcgc
     2821 tcgacgtgtc gattcaggcg caggtagtga atttattgga ggatctgcgg gaaaaattcg
     2881 gcctgacgta tttgttcatt gcgcatgatt tatcggtggt gcggcatctc tgccagcgcg
     2941 tcgcggtgat gtatctgggc cgcatcgttg agatggccga cagcgacgcc ttgttcgatg
     3001 caccactgca tccttatacc cgtgccttga tggccgccgt tccggtgccg gacccgaccg
     3061 tcgagcaagg ccgtgacttt caaccggtca agggcgaggt gccgagcccg atgaacccac
     3121 cctcagggtg tgtattccat cccaggtgtc ccgtggccgt gccgcgctgc tctcagcagc
     3181 ggccggaacc gcgcgaaatt cggccgggtc acatcgtggc atgtgatgag gtgcgataga
     3241 gtctgagcaa tatacaccac ggtttccgca tccggtgcgg catccattac caccttagcg
     3301 cggcctggct tgccaggcag tggaccggtg
//
LOCUS       DATAVD010000515         5230 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3399624, whole genome shotgun sequence.
ACCESSION   DATAVD010000515 DATAVD010000000
VERSION     DATAVD010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5230
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3399624"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..530
                     /locus_tag="VHX39_09555"
     CDS             <1..530
                     /locus_tag="VHX39_09555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX3991404.1"
                     /translation="PATDIGPTIDTDALAALNAYANGMGPGLFELALPTGTEHGNFFA
                     PRAFLLPGAAALQREVFGPILHIVRYQADRLDALLDDIENTGFGLTLGIHSRIETVQR
                     AIIGRLRVGNAYVNRNQIGAVVGVQPFGGRGLSGTGPKAGGPITLFRFAEERVVSVNT
                     AATGGNAALLGSDQN"
     gene            593..1660
                     /locus_tag="VHX39_09560"
     CDS             593..1660
                     /locus_tag="VHX39_09560"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3991405.1"
                     /translation="MKFGWLTLALSPAPDEDAVRITQQIDQVCAAETLGFSDVWLTEH
                     YFTGESVYNDALLFASALTMRTTRIRIGFAVLQMPFHHPVRLAVQLALLDNLSNGRID
                     VGIGKGSVYNEYEFVGHGLRSDDSRARMAESIEILERAWRETPLVYQGKYFNLRVPEL
                     RPRPVQQPGPPLWRSVISPGSFAECGRLGIPILTARLPVERIKERWALYASGLAEGGH
                     DAATRDRLLAQAALWRNVYVAESDAQAEDELSTLLLRTRTHMMHVRHEYNPADFVIDP
                     VMLNPWTNPAVGDSEALAFVLATGSLFGSPARVREQVAALRDAGVQHLLCQTGFGDMS
                     HEQNLLSMRRFGEQVMPAFAE"
     gene            complement(1665..2825)
                     /locus_tag="VHX39_09565"
     CDS             complement(1665..2825)
                     /locus_tag="VHX39_09565"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3991406.1"
                     /translation="MTVPDIVAAAIGLAPAVRAARDDAERLRQTPPALAEAITKAGIY
                     QMYLPRSMGGPETPPLTAFRVVEELSKVDGSVGWCAMIATALSLNAGRLPADVGRELA
                     GAPADYRGAGSARPGGRAWQVAGGYRIKGRWNFASGIQNANWLYCTCVMMDGDTPIQS
                     ATGAPVLRAAWVPRDQVTIVDTWSVMGMRGTGSQDFTVDDVFVPAARSCLSDAPPCET
                     GPLFNQRAWYVHVWTPSAANALGIARGAIDSLAEIAVTEASTLSTQLLRDRPIVQARI
                     GEAEAIVNAARAYVFDAVGQLWGTLCAGNEPSDREIASARLALVHAMHESVRAVDKVF
                     HAAGTNAIYTRMPLERAFRDVHVAVQHGAALPSYFESAGKVLMGLRPGEPGW"
     gene            complement(2851..3303)
                     /locus_tag="VHX39_09570"
     CDS             complement(2851..3303)
                     /locus_tag="VHX39_09570"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX3991407.1"
                     /translation="MLETREGGCHCGQVRFRAQVDLDLLSQCSCSICTKKGIAHLPVR
                     PVDFELLHGKHALTVYTFGTGVAQHTFCSHCGMHAFYIPRSLPDAISVNARCLDDIDG
                     LALKPTRFFDGRHWEEAQSKRIAAGGHVAPSGLSGATTLQAILDRAPA"
     gene            complement(3425..>5230)
                     /locus_tag="VHX39_09575"
     CDS             complement(3425..>5230)
                     /locus_tag="VHX39_09575"
                     /inference="COORDINATES: protein motif:HMM:NF040438.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase domain-containing protein"
                     /protein_id="HEX3991408.1"
                     /translation="ELDPVHPLNAVIVNLDKAPRNAAGRVEYRSDFTLMTPTDLAKGN
                     GWLLYDVPNRGNKVALTRLNRGADGNRPTTAAHAGDGFLMRHGFSLIWSAWQSRVPPG
                     GDRLNAVFPTVAATGTNRDEFIAEGFGPGDAFIQEVSDATFVGTLSYPAADFDRDKAS
                     LTVRQRETDRRATPPGLAWRYLDATHVEITRPSGFDRGAIYEFIYPAKDPEVMGIGFA
                     AIRDLVSFLRNDTSADNPIRGTVRHTLGFGISQSGRVLRDLAHLGFNQDLNGNKVFDA
                     ILPVVSGSRRTFINFAFAQPGRYSRQHEDHAFLDDQFPFTYPTLTDPLSGKTDGILRR
                     AAEAGVRPKIMHLDADSDMWAARASLVATDPAGKDVAMPDDVRIYLASSTQHAVHKPA
                     AKHAGQLPGNPLGYSSWMRALLIGLTEWVEQGTPPPASQFPSHAAGSLATREAAEHSF
                     PKIPGVRFPDVLNALHLRDHSVEPPVDGPEYPVFVNALDEDGNSLGGLRHPVLAAPLG
                     THTGWAVRVPGYAEGDLFTVQGSYIPFPATEAERRASGDPRRSIEARYPSHAAWALLV
                     IAAAEQLVTQRLLLREDADRLIAAARESFDVVAVL"
BASE COUNT          986 a         1657 c         1626 g          961 t
ORIGIN      
        1 atccggccac ggatatcggg ccgaccatcg acacggacgc gctggcggcg ctgaacgctt
       61 atgccaatgg gatgggaccg ggcttattcg agcttgcgtt gcctaccggg acagagcacg
      121 gcaatttctt tgcccctcgc gcttttctgc tgccaggtgc tgcggcgtta caacgcgaag
      181 tgttcgggcc gattttgcac attgtgcgtt accaggcgga ccggctggat gcactgctcg
      241 atgacataga aaacaccggg ttcggcctga ccctgggtat tcattcccgt atcgagacag
      301 tgcaacgcgc catcatcggg cggttgcgcg tcggcaatgc ctatgtgaac cgcaaccaga
      361 ttggtgccgt ggtcggcgtg caaccgttcg gcggccgtgg tctgtcgggc accggaccca
      421 aggccggcgg cccgatcacg ctgttccgct tcgccgagga gcgcgtcgtc tcggtcaaca
      481 ccgccgccac cggaggcaac gccgcacttc tgggctccga tcagaactga ggcggcttga
      541 tcgcacattg catgaccggc agtctgcctg atccccaaac aggacgacgg cgatgaaatt
      601 tggctggctg acccttgcgt tgtccccggc accggatgag gacgccgtcc gcataacgca
      661 gcaaatcgac caggtctgcg ccgccgagac gttggggttc agcgatgtct ggctgaccga
      721 gcactatttc accggcgaaa gcgtctataa cgatgcgttg ctgtttgcct cggcgttgac
      781 catgcggaca acacggatac gcatcggatt tgccgtgctg caaatgccat tccatcatcc
      841 ggtccggctt gccgtgcaac tcgcgctgct ggacaatctg agcaacggcc gtatcgacgt
      901 cggcatcggc aaaggcagcg tctataacga atacgaattc gtcggccatg gtctgcgcag
      961 cgatgacagc cgtgcgcgca tggcagaatc gatagaaatc ctggaacgcg cgtggcgcga
     1021 gacaccgttg gtgtaccaag gcaaatattt caacttacgt gtgccggagc taaggccgag
     1081 gccagtgcag caacctgggc ctccgttgtg gcggagtgtg atttcgcccg gatctttcgc
     1141 cgaatgtggc cgcctcggca ttccgatcct gaccgctcgc ctgccggttg aacggattaa
     1201 agaacggtgg gcgctgtatg catccgggct ggccgaaggc ggtcatgacg cggccacgcg
     1261 agaccgcctg ttggctcagg ccgcgctgtg gcgcaacgtt tacgtcgctg aatcagatgc
     1321 ccaggcagag gacgaactgt cgacgctgct gctgcgcacc cgcacccata tgatgcacgt
     1381 gcgtcacgag tacaacccgg cggatttcgt catcgatccg gtgatgctga acccatggac
     1441 caatcccgcg gtcggcgata gcgaagcgtt ggcgttcgta ttggccaccg gctcactgtt
     1501 tggttcgccg gcgagggtgc gtgagcaggt tgctgctctg cgcgacgccg gcgtgcagca
     1561 tttgctgtgc cagaccggat ttggcgacat gagtcacgag cagaacctgc tgtccatgcg
     1621 acggttcggc gaacaggtga tgcccgcgtt tgccgagtaa tccattacca tccgggctcg
     1681 cccggccgca ggcccatcag caccttgccg gcagattcga agtaactcgg caatgcggca
     1741 ccatgctgca ccgctacgtg aacgtcacga aacgcccgtt ccaacggcat ccgtgtgtag
     1801 atcgcattgg ttcccgccgc atggaacact ttgtcgacgg ctcggaccga ctcatgcatc
     1861 gcatgcacca gcgccagacg ggccgacgcg atctcccggt ccgagggctc gttgccggca
     1921 cacaacgtgc cccaaagttg cccgacggca tcgaacacgt aggctcgtgc ggcattgacg
     1981 atggcttcgg cctcgccgat gcgggcctgc actatcggcc tgtcgcgcag caactgcgtg
     2041 gatagggttg acgcttcagt cacggcaatt tcggccaggc tgtcgatcgc gccgcgggca
     2101 atgccgagtg cattggcggc tgagggagtc cagacgtgga cgtaccaggc gcgctggttg
     2161 aacaacggac ccgtttcgca cggtggcgcg tccgacaggc aactgcgcgc tgccggcacg
     2221 aatacgtcgt caaccgtgaa atcctgactt ccggtgccgc gcatccccat caccgaccac
     2281 gtatcgacaa tggtgacctg atcccgtggc acccacgcgg cacgaagcac cggagcgccg
     2341 gttgccgatt gaatcggcgt gtcgccatcc atcataacgc aggtgcaata caaccagttc
     2401 gcgttctgaa taccgctggc gaaattccaa cgccctttga tgcgatagcc gccggcgacc
     2461 tgccacgccc ggccgccggg ccgcgccgaa ccggcacctc gataatccgc gggtgcgcct
     2521 gcaagttcgc gcccgacgtc ggctggcagc cggccggcgt tcagcgacaa agccgtcgcg
     2581 atcatggcgc accatccgac ggagccatcg actttcgaca gttcttcgac cacgcggaag
     2641 gcggtcagcg gcggcgtttc gggtccgccc atcgagcgcg gcagatacat ttggtaaatg
     2701 ccggccttgg taatcgcctc agccagtgcc ggcggggttt gccgcaatcg ctccgcgtca
     2761 tcgcgggcag cgcgcaccgc aggggcgagg cctatggcgg cggcgacaat gtcaggaacg
     2821 gtcaaatcga tgtccttgtc tgggctcgcg ctatgccggt gcgcggtcca aaatcgcctg
     2881 aagcgtagtg gcgccgctga ggcccgaagg tgcgacgtgt ccacctgcgg caatgcgctt
     2941 gctctgcgct tcttcccagt gtcggccatc gaagaagcga gtcggtttca gcgccagccc
     3001 gtcgatgtcg tcgaggcacc gcgcgttcac cgaaatcgcg tccggcagcg accgcggtat
     3061 gtaaaacgca tgcatgccgc aatgcgagca gaacgtatgc tgcgccacgc cggtgccgaa
     3121 ggtgtaaacg gtcagcgcat gcttgccatg cagcagttcg aaatcgaccg ggcgaaccgg
     3181 cagatgggcg atcccttttt tcgtgcaaat actacagctg cactgcgaca acagatccaa
     3241 atcaacctgg gcgcggaagc ggacctggcc gcaatggcaa ccgccttctc ttgtttccaa
     3301 catggtacgg gttcccgtga tgaacccctt tggtgtcgca aattggtgcg gcgccgtcca
     3361 tcctgggcaa accgactcgc tgccgtcaca tgactgcgca accccggcag cgaccatttg
     3421 cgttctataa aaccgccacc acatcgaacg attctcgcgc cgccgcgatc agccggtcgg
     3481 catcttcccg cagcagcaac cgttgcgtca ccagttgttc cgccgcagca atcacaagca
     3541 aagcccacgc ggcgtgggag ggatagcgcg cctcgatcga acggcgaggg tcgcctgacg
     3601 cgcgacgttc agcttcggtc gcggggaacg gaatgtatga cccttgcacg gtgaacagat
     3661 cgccctcggc ataacccggc acccgaaccg cccatcccgt gtgagtgccc agtggcgcgg
     3721 caagcacggg gtgacgcagg ccgcccagac tgttgccgtc ttcatccagc gcgttgacaa
     3781 acaccggata ttccggccca tcgaccggcg gctccacgga atgatcgcgc agatgcaatg
     3841 cgttgagcac gtcgggaaac cggacacccg gaattttggg aaacgaatgc tcggccgcct
     3901 cgcgcgtcgc cagcgatccc gcggcgtgcg agggaaactg gctggctggc ggcggtgtgc
     3961 cttgctccac ccattcggtc agcccaatca gcagcgcgcg catccacgag ctgtagccaa
     4021 gcggattgcc cggcaattga ccggcgtgtt tcgccgccgg cttgtgcacg gcatgctgcg
     4081 tgctggaggc gaggtaaatc cgcacatcgt cgggcatcgc cacgtccttg ccggccggat
     4141 cggtggcaac cagcgaggcc cgagccgccc acatgtcaga atctgcgtcc aaatgcatga
     4201 tctttggccg caccccggcc tccgccgcgc gccgcaagat gccgtcggtc ttaccgctga
     4261 gcggatcggt cagcgtcgga taggtgaacg ggaactgatc gtccaaaaac gcatgatctt
     4321 cgtgctgcct cgagtaccgt cccggctgcg cgaacgcgaa attgataaag gtgcgccgag
     4381 aaccggatac gaccggcaag atcgcgtcaa acactttgtt gccgttcaaa tcctggttga
     4441 acccgagatg cgcgagatca cgcaagactc tcccgctttg cgaaattcca aaacccaggg
     4501 tgtggcgcac ggtgcctcgg atcggattgt ccgccgacgt atcgttacgc aggaacgaca
     4561 ccaggtcgcg gattgcggcg aaaccaattc ccatgacctc ggggtctttg gcggggtaga
     4621 taaattcata aatcgccccg cgatcgaagc cggacgggcg ggtaatttcg acgtgggtgg
     4681 catcgagata ccgccatgcc agacccggtg gtgtggcgcg gcgatccgtt tcgcgctggc
     4741 gaacggtcag gcttgcttta tcgcggtcga aatcagccgc cggatatgac aatgtgccca
     4801 cgaatgtcgc gtcagaaacc tcctggataa atgcatcgcc tggcccgaac ccttcggcga
     4861 tgaattcgtc gcggttggtg ccggtcgcgg cgaccgttgg gaaaaccgca ttcagccggt
     4921 cgccgcccgg cgggacacga ctttgccacg cgctccagat cagcgagaaa ccgtgccgca
     4981 tgaggaaccc atcgccagcg tgcgccgccg ttgtcggacg gttgccgtcg gcgcctcggt
     5041 tgagccgggt cagtgcgacc ttgttgccgc gattgggcac gtcatacagc agccagccgt
     5101 tgcccttcgc cagatcggtc ggcgtcatca gcgtgaagtc ggagcggtac tcgacgcgtc
     5161 cagccgcgtt gcgcggcgct ttgtccagat tgacgatcac cgcgttcaga ggatggacgg
     5221 gatcgagttc
//
LOCUS       DATAVD010000516         4398 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_49938, whole genome shotgun sequence.
ACCESSION   DATAVD010000516 DATAVD010000000
VERSION     DATAVD010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4398
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49938"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            283..1773
                     /gene="istA"
                     /locus_tag="VHX39_09580"
     CDS             283..1773
                     /gene="istA"
                     /locus_tag="VHX39_09580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEX3991409.1"
                     /translation="MRLRTDHTQITSSAKAGLSVATGRRTEGDPRVPSAKKQRRAYRT
                     RPDPLAGLWDEEIVPMLQAAGGLRPISLFDELARRHPDRIGPSFRRTLERRVAEWKAL
                     HGADRDVMFRQVQQPGRMGLSDFTEVSDLGVVVGGKPLEHRLYHFALACSGFEHVEIV
                     LGGESYPALASGLENALRLLGGAPREHRSDSLSAAFGNLTKSDADDLTKRFEALVVHF
                     GMLPSRNNRGVAHENGAIESRHGHVKQRIAQALLLRGSASFNDLDAYRAFAADVVGQH
                     NLRHRAMIDAERAVLRPLPTQPAMTWEEMTVRVTSASGFMCRHVFYTVPSRLVGHRLR
                     LRIHDDRIEAYLGGSFLLTLPRGRRPKGAGAVHVVDYHHVITALRAKPGALANLAYRD
                     ALWPRTAYRRAWEALIADGPVRDAARIMVGLLALAHDRGVEADLATAIDETLEAGELP
                     DLAVMLRRFTPKATAAPEVSVILPSLAAYDRLIAMAGAEIGSEMAP"
     gene            1806..2533
                     /gene="istB"
                     /locus_tag="VHX39_09585"
                     /pseudo
     CDS             1806..2533
                     /gene="istB"
                     /locus_tag="VHX39_09585"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
     gene            2603..2914
                     /locus_tag="VHX39_09590"
     CDS             2603..2914
                     /locus_tag="VHX39_09590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991410.1"
                     /translation="MPRKSIGDRAMTDAERQARCRAARNAAKPAIRTRRPADHRSRAQ
                     RWRDAVAELIDLQAQYAAWFETLPDNLRENTTAEALQAICDIDLAELQAIEPPRGFGR
                     D"
     gene            3031..3666
                     /locus_tag="VHX39_09595"
                     /pseudo
     CDS             3031..3666
                     /locus_tag="VHX39_09595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611080.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            4121..>4398
                     /locus_tag="VHX39_09600"
     CDS             4121..>4398
                     /locus_tag="VHX39_09600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991411.1"
                     /translation="MTPPIRIDTATGLKAFATRAAKATEKIAGIGYMPVADETLITLP
                     PPPPGAVFNAEEQARYREYNKSRQGAADYMAMEGQFAKYLEDVYSAPP"
BASE COUNT          824 a         1477 c         1369 g          728 t
ORIGIN      
        1 accgatgcgc ctgaagccga tccagctgcg gtgtcgagcg gcagtgcgac ggccagccga
       61 tgccagcctc ggtcgttgcc cggcgacaac tacgatgagc ggtgcgcgtc aattaggatg
      121 agcggttgaa gcgccggcga cgggagggcg gagcccgacc agagccggcg cttcaatcga
      181 agcctttgct tctcctgcgg gcctgactgg gctggtgtcc tccgacgatc ggaggggccg
      241 gtgacaggca ggcacatcaa cgaccagcag gtgaggctct acatgcgact acgcaccgac
      301 catacgcaga tcacgtcctc ggccaaagcc gggctgtcgg ttgccaccgg cagacgcacc
      361 gagggcgatc cccgcgtgcc gagcgccaaa aagcagcgac gggcctaccg cacacgccct
      421 gatccactgg ctggcctgtg ggacgaggag atcgtcccga tgctgcaagc cgccgggggc
      481 ctgcgtccga tcagcctgtt cgatgaactg gcgcggcgcc atcccgatcg tatcgggccg
      541 tcgttccggc gcactctgga gcggcgggtg gcggagtgga aagccctcca cggcgccgac
      601 cgggacgtca tgttccgtca ggtccagcaa cccggccgta tgggcctgtc cgatttcacc
      661 gaggtgagcg atctcggggt cgtcgtgggt ggcaagcctc tcgagcaccg gctgtatcat
      721 ttcgcgctgg cctgttccgg cttcgagcac gtcgagatcg tgctcggcgg cgaaagctac
      781 ccggccctgg cgagcggcct ggagaatgcg ctccgcctgc tcggcggcgc gccacgggag
      841 caccgcagcg acagcctctc ggcggcattc ggtaacctga ccaagtcgga tgcggacgat
      901 ctgaccaagc gtttcgaggc gcttgtcgtc catttcggca tgctgccaag ccgcaacaac
      961 cgcggtgttg cacacgagaa tggcgccatc gagagccgcc acggccacgt caagcagcgc
     1021 atcgcccagg cgcttctgct gcgcggatcc gccagcttca acgatctcga tgcctatcgc
     1081 gccttcgcgg ctgacgtggt cggccagcac aatctccgcc atcgggccat gatcgatgcc
     1141 gagcgcgcgg tactgaggcc gctgccgacg cagccggcga tgacgtggga ggagatgacc
     1201 gtgcgggtga ccagcgcctc cggtttcatg tgccgccacg tcttctacac cgtcccgagc
     1261 cggctggtcg gccatcgcct gcgcctgcgt atccacgacg accgtatcga ggcgtatctc
     1321 ggcggcagct tcctgctgac cttgccacgc gggcgcagac ccaaaggggc tggtgccgtc
     1381 catgtggtcg attaccacca cgtgatcacc gcgctgcggg caaaaccggg ggctttggcc
     1441 aatctggcgt atcgagacgc gctgtggcca cgcaccgctt atcggcgcgc ctgggaggcg
     1501 cttatcgctg acggccccgt tcgcgacgcc gcgcggatca tggtcggtct gctggcactg
     1561 gcgcacgatc gcggcgtgga ggccgacctt gcgaccgcaa tcgatgagac actcgaggcc
     1621 ggtgaactac ccgacctggc cgtcatgctg cgtcggttca cccccaaggc gacggcggcg
     1681 cccgaggtct cggtcattct gccgtccttg gctgcctatg accggttgat tgccatggcc
     1741 ggggcagaga tcggctcgga gatggcacca tgagcgtcac catcgatgcg gcccaactgc
     1801 cggcgatgct cacccagctc cggttgccca cgatcgctcg cctgtggccc gccatcacgc
     1861 agaccgccga tcgcgagagc tggcccgcag ccaaaaccct tgccaccctg ttcgagcacg
     1921 agatcgccga acgggcgcag cgacgcaccg cgcggcatct gctggaagcc cgcctgccgg
     1981 tggggaaaac catcgaacgt ttcgacttca ccgccgttcc ctcggtcagc aaggctcgcg
     2041 tcatggcact cgccgaaggc gacgcctggc tggcaaaggg caccaatatt ctgctgtttg
     2101 ggcctccagg taccggcaag tccatctcgg ggcggcactc ggccatgcga tgatcgacgc
     2161 cggctaccgc gtgctgttta cccgcacgac cgacctcgtc cagcaccttc aggcggcgcg
     2221 tcaggatctc acactggcaa ccgcgatcga gaaactcgac aaataccacc tgctggtcct
     2281 cgacgatctg tcctacgtcc agaagagcca ggccgagacc agcgtcatct tcgaactgat
     2341 ctccgcgcgc tatgaacgac ggtctttgcg gatcaccgcg aatcaaccgt tcggcgcatg
     2401 ggacgcgatc ttccccgatc ccgccatgac ggtcgctgca atcgaccgcc tggtgcatca
     2461 ctccatcatc ctggagatga acaccgacag ctaccggcgc aaatccgccg agacaaaacg
     2521 gccgggcaaa tgagtgtcaa aacccgggca aaccgttgtt ctgacaccag gggtatcgtg
     2581 acgtcacgat tgggagtgga ccatgccgcg taaatcgatc ggcgaccgcg ccatgacgga
     2641 cgccgaacgc caggcccgct gccgcgctgc gcgaaacgcc gcaaagcccg cgatccgtac
     2701 tcgccgcccg gccgatcatc gtagccgcgc acagcgctgg cgcgatgccg tcgcggaact
     2761 catcgacctg caggcgcaat atgccgcgtg gttcgaaaca ttgccggaca atctacgcga
     2821 gaacacgaca gccgaggctt tgcaagccat ctgcgatatc gacctcgccg agcttcaggc
     2881 catcgaaccg ccgcgaggct tcggcaggga ttgatcgcca ctatttcgat tgacgtcgac
     2941 cgacaacaag cggaatgaat agcctccgct ggcgctcatc ctaattgacg cgcgccgctc
     3001 atcctaattg tcgcgctata gttctgctcc tattaccggc cagaggccat ggactggtgc
     3061 gaacggaacg ccgtccaata cgtcatgcgg ctggcgacca acgtgacact ggccgcgttg
     3121 atggagccga aggccgacga ggtacgcgtc agacgtgcca ccgggccaga caagacggca
     3181 cgcgactaca ccgagagcac ctacggcgcc aagaaatgga cgaaagcccg ccgtgtggtg
     3241 gcccggatcg aagcgacgcc gctcggcctg gacatccgct acgtcgtgac caacatcgtc
     3301 cattgcgcgc cgcagtgggt ttacgaaagc ctctactgcg cccgcggtgg cgccgagaac
     3361 ctgatcaagc ggcacaaggg ccagcttgcc tccgaccgca ccagttgccg ttcacccctg
     3421 gccaaccaga tgcggctatt ccttcacacc gtcgcgtatt ggttgatgcg ggcggtgagt
     3481 ggggcggtgc ccgcacagca gccgctggcc aaaggcgact tcaatagtct gcggttgcgg
     3541 ctgctgaagg tcgcagtgcg aatcaacgcg accagcagcc ggatccgact ggcgttcact
     3601 gcggcctgtc cagacgcggc gctgttccgt ggactggtgg gaacgctgat cctgcggcca
     3661 acgtgaccgc cggggcgcgt gccccgaccg aacccgttcc ctgcaacctc cgacgcctta
     3721 cagacatggt ctgaacagcg ggtcaaccag ccggggggtg aggtgtggct gcattcgtcc
     3781 gttatacgat atgatacaac cgttacagtt aggcacgaat aggatgggct aaagcgatag
     3841 cagcatagcc atgttctttt tctgtgccac caaccgtgct atggcgtacc cccatccagg
     3901 acctgaaaag aagatcgcag tcgccattct gcataaccgc atgatgctac cgccggtcac
     3961 gtcgcaggac ccgatccgcg cggccgtgac ggcggcgttt ggcccggact gaggggacga
     4021 gtttggcggc gtcgtcatcg gtggttatcc tccatctggg tcggccacgg ggccagtatc
     4081 ccgcctaaag ttcgagacac aacgacaacg gtgaactgcc atgacgccgc caatccggat
     4141 cgataccgcc accggcctga aggcattcgc cacccgcgcc gccaaggcca ccgagaagat
     4201 cgccggtatc ggctacatgc cggtcgcgga cgaaacgctc atcaccctgc cgccgccgcc
     4261 gccgggtgcc gtgttcaacg ccgaggaaca ggcacgctat cgggaataca acaaatcccg
     4321 ccagggcgcg gccgattaca tggcgatgga aggccagttc gcgaagtatc tcgaggacgt
     4381 gtattccgcc ccgcccat
//
LOCUS       DATAVD010000517         2579 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2280986, whole genome shotgun sequence.
ACCESSION   DATAVD010000517 DATAVD010000000
VERSION     DATAVD010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2579
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2280986"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..215)
                     /locus_tag="VHX39_09605"
     CDS             complement(<1..215)
                     /locus_tag="VHX39_09605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HEX3991412.1"
                     /translation="MMSGGGFTHFDASGNATMVDVSGKPVTDRTATAHAQVIMNPATL
                     AMIEAGTAKKGDVLGVARLAGIMAAKRT"
     gene            complement(212..1048)
                     /gene="trpC"
                     /locus_tag="VHX39_09610"
     CDS             complement(212..1048)
                     /gene="trpC"
                     /locus_tag="VHX39_09610"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003620145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEX3991413.1"
                     /translation="MPNDTGTIPDVLLRICANKRMEVAVRKSQTPIEALRQTIASRGD
                     PPRGFGCALKDATILGKYGLIAEIKKASPSGGLIRTDFDPAALARAYRDGGATCLSVL
                     TDEKYFQGTSEHFRAARAAVDLPVLRKDFILDPWQVYESRAMGADCILLIMACLTDTE
                     ARELEGLARNLNMDVLAEIHDKRELDRALGLETSLIGINNRDLRTLKTDLAITEELSP
                     LVPPDRFLVAESGIRDTDDLRRLSAVGPNCYLVGESLMRQDDVTAAVRALLGDSAPRA
                     VG"
     gene            complement(1065..2081)
                     /gene="trpD"
                     /locus_tag="VHX39_09615"
     CDS             complement(1065..2081)
                     /gene="trpD"
                     /locus_tag="VHX39_09615"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEX3991414.1"
                     /translation="MSQDLKPILAKLAGGETLSVDEAEAAFTIIMSGEATPAQIGALL
                     MAMRVRGETVPEITGAVRAMRARMTAIDAPEGAIDVCGTGGDNAGTLNVSSAVTFVVA
                     ALGVPVAKHGNRALSSRTGGADVLTALGVNIDAPMERLPDILREAGAVFLFATRHHPS
                     TRHASGPRVELGTRTIFNILGPLTNPARVKRQLSGVFSPEWTRPMAETLAALGCESAW
                     LVHGLGLDELTVAGENQVTALKNGSVHTFSVVPEDAGLVRTPIAAIKGGDPAFNADAL
                     LGVLRGVAGAYRDTVLLNAAAALIVAGRTMDLREGVEQAARAIASGAALNALETMRRV
                     SVAD"
     gene            complement(2094..>2579)
                     /locus_tag="VHX39_09620"
     CDS             complement(2094..>2579)
                     /locus_tag="VHX39_09620"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010514241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEX3991415.1"
                     /translation="KPEAIVLSPGPCTPNEAGICLDLIAAAAGKFPILGVCLGHQAIG
                     QVFGGQVVRAPLPMHGKLSAISHNGSGILEGVPSPFSATRYHSLIVARATLPATLIPT
                     AWTDDGLIMAMHHRDFPIHGVQFHPESIASEQGHRILANFLAIARFSNEPGVAKNARA
                     A"
BASE COUNT          499 a          817 c          798 g          465 t
ORIGIN      
        1 gtgcgcttcg ccgccatgat cccggcaagc cgtgccacac ccagaacgtc acccttcttt
       61 gcagtgcccg cctcgatcat cgccaaagtc gccgggttca tgattacctg ggcgtgcgca
      121 gtggcggtgc gatcggtaac aggtttgccg gacacatcga ccatcgttgc atttcccgag
      181 gcgtcgaaat gggtgaaccc accaccgctc atcatccaac cgcccgaggc gcactgtcac
      241 ccaacagcgc ccgcaccgcc gccgtaacgt cgtcctgccg catcaaactt tcaccgacca
      301 aataacaatt agggccaacc gcagaaagcc gccgcaggtc gtcggtatcg cggatcccgc
      361 tctcggcgac aaggaagcgg tcgggtggca ccagcggcga caattcctcg gtgattgcaa
      421 ggtcggtctt cagcgtgcgt aagtcacgat tgttgatacc gatcagcgac gtctccaggc
      481 ccagtgcgcg atcgagttcg cgtttgtcgt gaatttcggc aaggacgtcc atgttgaggt
      541 tgcgcgccaa tccttccagt tcacgtgcct cggtatcggt caggcaagcc atgatcagca
      601 gaatgcaatc ggcgcccatc gctcggcttt cgtagacctg ccacgggtcc agaatgaagt
      661 ccttacgcag cacaggcaaa tccaccgcgg cgcgagcggc acggaaatgt tcagacgtgc
      721 cctgaaagta tttctcatcg gtcagcaccg acaggcaggt ggcaccacca tcgcgatagg
      781 cgcgggccag cgctgccgga tcgaaatcgg tacggatcaa cccacccgat ggtgaggcct
      841 tcttgatctc ggcgatcaac ccgtacttgc cgaggattgt cgcatccttc aaagcgcaac
      901 cgaaaccgcg cggcgggtca ccgcgcgacg cgatggtctg gcgcaacgcc tcgatcgggg
      961 tttgcgattt gcggacggcc acttccatcc gcttgttggc gcagatgcga agcagaacgt
     1021 cgggaatggt accagtatcg ttgggcattg agcctcccgc gggatcagtc tgccacggac
     1081 acgcgtcgca tggtttccag agcgttcaat gccgcacctg acgcgattgc gcgcgcagcc
     1141 tgttcgacgc cttcgcgcaa gtccatcgtc cggccggcaa caatcaacgc ggcggcggca
     1201 ttcaacagga cggtatcgcg ataggcaccc gccacaccgc gcaacacacc gagcagcgca
     1261 tcggcgttga atgcgggatc gccgcctttg attgcggcga tcggtgtccg gaccaggccg
     1321 gcgtcctcag gtacaacgga aaaggtgtga acggacccgt ttttcaaggc ggtgacctgg
     1381 ttttctccgg ccaccgtcaa ttcatccagc ccgagaccgt gcaccagcca ggccgactcg
     1441 cagcccagag cagcgagagt ttccgccatc ggcctggtcc attcggggga aaacacgccg
     1501 ctcaattgtc gcttcacgcg cgctggattg gtcagcggcc ccaggatgtt gaagattgtg
     1561 cgggttccca actcgacccg aggcccagac gcgtggcgcg tggacgggtg atgccgcgtg
     1621 gcgaacagga acacggcgcc ggcctcgcgc aaaatgtcgg gcagccgctc catcggtgcg
     1681 tcaatgttga cgccgagtgc ggtcagcacg tcggcacctc cggtgcggga cgacagggcc
     1741 ctgttgccat gcttggccac gggcacacca agcgcggcaa cgacgaaggt tacagccgac
     1801 gagacattca gcgttcccgc attgtcccca ccggtaccgc agacgtcgat cgcgccttcc
     1861 ggagcgtcga tggcggtcat ccgcgcacgc atggcccgga cggcgccagt gatctcgggc
     1921 accgtttcac cgcggacgcg catggccatc agcagtgcgc cgatttgtgc cggcgtggcc
     1981 tcgccagaca tgatgatggt gaaggcagct tcggcttcat cgaccgacag tgtttctccg
     2041 ccggcgagct ttgcaagaat gggcttcaga tcctgcgaca tcgcttgcgc ggttcacgca
     2101 gcgcgggcgt ttttggcaac gccaggctcg ttggagaatc gagcgatcgc caggaagttc
     2161 gccaaaatgc ggtgaccctg ctcgctggcg atactctccg ggtgaaactg cacaccgtgg
     2221 attggaaagt cgcggtgatg cattgccatg atcagtccgt cgtcggtcca cgcagtcggg
     2281 atcagggtcg cgggcagcgt ggctcgcgca acgatcagac tgtggtagcg ggtagcggaa
     2341 aatgggcttg gcacgccctc gagaatgccg ctgccgttgt gcgatatggc gctgagtttg
     2401 ccatgcattg gcaatggcgc gcggacaacc tgcccgccaa acacctggcc gatcgcctga
     2461 tggccgaggc aaacgcccag aatgggaaac tttccggccg cggcggcgat caggtcgaga
     2521 cagatcccgg cttcattcgg ggtacaagga ccgggcgaga gcacaatcgc ctcgggttt
//
LOCUS       DATAVD010000518         4046 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_795802, whole genome shotgun sequence.
ACCESSION   DATAVD010000518 DATAVD010000000
VERSION     DATAVD010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4046
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_795802"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2828)
                     /locus_tag="VHX39_09625"
     CDS             complement(<1..2828)
                     /locus_tag="VHX39_09625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991416.1"
                     /translation="MTRRPLTEAAAGKARPNGRSSKPAAGQDRSATLEPAPASRTAVK
                     QRPVRSPAKDRPAQEAAVKRAPATAEPPPAKQPARPAMTRPIMVELNADVEGWPTRSR
                     FDVVLLGQISSVAPVDTFTIHDTSGLELASVQFGQNDYQETETLIGGGIVYQTGFQVF
                     LPMPGGDGVRVADMWVRARSRDGAAFEEGMRLGCMAGQAAILAGPVRGADEAEIPAPH
                     GIVYLESADITAEGRLQVYGWTMATSAIVAVQILVDGRRVGTAVQGRERADVAAAYPS
                     FPNARHAGFVFERAADAAIRGAANVRVEVVCLTGASHAATIPLSHADAAASDAAPAFA
                     GSSPQDQREELPGLEASQRNFRAPPASDRDPSGLVAPHAEPAEGSVLLHCDHAAVTAE
                     GGLMIQGWAISQAGIACVAVEVNGRPLGEANYGLERADLPTEQEGVPLPIGFDYVGKI
                     PGFAGGTSYDVRVIATNRAGDRAEVTIAATSPNLSAFMFELDGPATRDGVMIQPVTGR
                     LVIEGWAMARDGMAGIDVELDGTLLGHAHYGIARPDVGAVFPDWEGAARSGYTFHCPS
                     RALPDGEHVIRLTARSKTGGSHVHAFRITVKKTDDPEEAASIRRRVKWVEQKTTNQLL
                     DLLDWRPAFHVVVTGHPAGVTSAAGIDSAWGLTIGSILEQSWPRWRVTIVASGADDAD
                     AAQSAIHRLAHEQTERFAVITPSDTAVWQAPIAAGSEAALILLLAAGDELGRDAFSEF
                     AVASGMHKAADCFYADEFRLPPSTTRPEAFFKPDFSPSLLLSSNYIGRPLVARPALLA
                     AIAITPETLMRDGFHDLALRCTEVAAQTYHVTELLSRTDGGSAVNPENGVAALRNAMV
                     RRVIGAEVLPGMLPETFRVRQTAVVTGKVSIIVPTCAAQGFVDTCFSTLRAQTEYRNF
                     EIVCIDNIPETEAGYKQFVREHADRIVE"
     gene            complement(2906..3301)
                     /locus_tag="VHX39_09630"
     CDS             complement(2906..3301)
                     /locus_tag="VHX39_09630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991417.1"
                     /translation="MNYFPPFEVIRRSVDIQAVRGDLRVNMSYEDFVELLKLMIRGIE
                     VDEEWYSRTYDDIGQAISAQSIRSARHHFVNDGYFEGRLPAPVQVDEAWYLRRYPDVA
                     EGISKGLLTSAQEHFEMDGYREGRLPFEM"
     gene            3704..>4046
                     /locus_tag="VHX39_09635"
     CDS             3704..>4046
                     /locus_tag="VHX39_09635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEX3991418.1"
                     /translation="MSKPTPDQPTDRDLAAIVRHFGQARILVIGDVILDRYRIGEAQR
                     LSPEAPIPVLRPTRRHDTPGGAANVAMNVATLGGHAVLAGVIGDDRAGKTVARLLDEA
                     ASIENALIVAAD"
BASE COUNT          771 a         1338 c         1241 g          696 t
ORIGIN      
        1 atttcgacga ttctgtctgc gtgttcgcga acgaattgct tgtagcccgc ttcggtttcc
       61 ggaatgttat cgatacacac gatctcgaaa ttccggtact cggtctgcgc gcgcaatgtc
      121 gaaaagcagg tgtcgacaaa accttgcgcc gcgcaggttg ggacgatgat cgaaaccttg
      181 ccggtcacca ctgcggtttg ccgcacccgg aaggtttcgg gcagcattcc cggcaggacc
      241 tcggcgccga tcacgcgcct gaccatggca ttgcgcaagg cggcaacgcc attctcgggg
      301 ttcaccgcgc tgccgccatc ggtacggctc agcagttcgg tcacgtgata ggtctgcgct
      361 gccacttccg tgcagcgcaa cgcgaggtcg tggaagccgt cgcgcatcaa tgtttccggg
      421 gtgatggcaa tggcggccaa caacgctggt cgcgccacca acggccggcc gatataattg
      481 ctcgataaca gcaacgaagg tgaaaaatcc ggcttgaaga aggcttctgg ccgcgtggta
      541 ctgggcggta ggcgaaactc gtccgcatag aagcaatcgg cggccttgtg catcccgctg
      601 gcaacggcga attcgctgaa tgcatcgcgc cccagctcgt cgcctgccgc gagcagcagg
      661 atcagcgccg cctcactccc ggcagcaatc ggcgcctgcc acactgccgt atcggacggc
      721 gtgatcaccg caaaccgctc cgtctgttca tgggccagcc ggtggatcgc actttgcgct
      781 gcatcggcgt catcggcgcc ggacgcgaca attgtcaccc gccatcgcgg ccaggattgt
      841 tccagaatcg agccgattgt caaaccccag gcgctgtcaa tgccggcggc ggaggtcacg
      901 ccggcgggat gaccggtcac cacaacgtga aacgccggcc gccagtccag caggtccaac
      961 aactggttcg tggttttctg ttcgacccat ttgacccggc gccgaatgga ggcggcctcc
     1021 tccggatcgt ccgtcttttt aaccgtgatg cgaaacgcat ggacgtgcga gccgccggtc
     1081 ttcgaccgag ccgtcagccg gatgacatgc tcgccatccg gcagggcacg ggacggacag
     1141 tggaaggtgt agccactgcg agcggcgcct tcccagtccg gaaataccgc cccgacatcg
     1201 gggcgggcga tgccgtaatg ggcgtggcca agcaacgtgc cgtccagttc gacatcgatg
     1261 cccgccatgc cgtcccgcgc catggcccaa ccttcgatga ccagccgtcc ggtgacgggc
     1321 tggatcatga cgccgtcgcg cgtggccggt ccatcaagct caaacatgaa tgccgacagg
     1381 ttgggagacg ttgcggcaat cgtcacctcg gcgcggtcgc cggcgcggtt ggtcgcaatg
     1441 acccggacgt catacgacgt gccgccggcg aacccgggga ttttgccgac gtagtcaaag
     1501 ccgatgggaa gcggcacgcc ttcttgttcg gtcggcagat ccgcccgttc caggccatag
     1561 tttgcctcac ccaagggccg gccattcacc tcgacagcga cgcacgcgat gccggcctgg
     1621 gaaatcgccc acccctggat catcaggccg ccctcagcgg tgacggccgc gtgatcgcaa
     1681 tgcagcagca cggagccctc ggcaggttct gcatgcggtg cgaccagccc ggatggatcg
     1741 cgatcgctgg ccggcggcgc ccggaaattc cgttgcgagg cctcgagtcc aggcaactcc
     1801 tcccgctggt cctgcgggct ggatccggca aacgcaggcg cggcgtccga agccgccgca
     1861 tcggcatgcg aaagtgggat tgtcgctgcg tggcttgcgc ccgtcaggca caccacctcc
     1921 acgcgcacgt tggcggcccc gcggatggcg gcgtcggccg cccgctcaaa aacgaagccg
     1981 gcatgccgag cattcggaaa actcgggtag gcggccgcca cgtcggcgcg ttcacggcct
     2041 tgcaccgccg tgcccacccg cctgccgtcg accaggatct gcaccgcgac gatcgccgac
     2101 gtcgccatgg tccaaccgta cacctgcagc cggccttcag cggtgatgtc ggccgattcc
     2161 agatagacga tgccgtgggg agccgggatt tccgcctcgt cagcgccgcg gaccggaccg
     2221 gccagtatcg ccgcctggcc cgccatgcaa cccagccgca tgccctcttc gaacgccgca
     2281 ccatcccggg atcgggcacg cacccacata tcggcaacgc ggactccgtc accgcccggc
     2341 atgggcaaaa acacctggaa gccggtttgg taaacgatac ctccgccgat cagcgtctcg
     2401 gtttcctggt agtcgttctg gccaaactgc acggaagcca gttcgagccc ggaggtgtcg
     2461 tggatcgtaa acgtgtcgac cggcgcgacc gaggagatct gacctaacaa taccacgtcg
     2521 aagcgcgacc gggttggcca gccttccacg tcggcgttca gttcgaccat gatcggccgg
     2581 gtcattgccg gccgcgccgg ttgtttcgcc ggtggaggct ccgccgtcgc aggcgctcgc
     2641 ttcaccgccg cctcctgggc tggccggtcc ttggctggcg atcgcacagg ccgttgcttc
     2701 accgccgtgc gtgaggccgg tgcgggttcc agggtcgccg atcgatcctg accggcggcc
     2761 ggcttcgacg aacgcccgtt gggccgagct ttgccggcag ctgcctccgt caacggacgc
     2821 cgcgtcatgc cggcctcatg atctgggcca atgtaacgtt cgcggcggaa ccgtgacgga
     2881 cgaagcgatc aggtttctcc gacgatcaca tttcaaaggg aagccgtccc tctctgtagc
     2941 catccatttc gaaatgctcc tgcgctgaag ttaataaacc cttgctgatt ccctcggcaa
     3001 cgtcaggata gcggcgcaga taccaggctt catcgacctg gacaggcgcc ggcaggcgac
     3061 cctcgaaata accgtcgttc acgaaatgat ggcgcgcgga cctgatactt tgtgcgctga
     3121 tcgcctggcc gatatcgtca taagtgcgcg aataccattc ctcatcgacc tcgatgccgc
     3181 ggatcatgag ttttaaaagc tcaacgaaat cttcatagga catattaacc cgcagatcgc
     3241 cgcgcacggc ctgaatatca actgaacgac ggatcacctc gaacggcgga aagtaattca
     3301 cggtacctcc actgccaaac cgggcactgc caaaccgggc actgccaaac tggcattgca
     3361 aaactggcca tcgcgagacg cgacgtagcg agtttgggcg atacagtgtt gaggttgcgt
     3421 gaaaggacat cgtgagaatg gctattacga gcgttaacgt tacgagaaat tgcacaatga
     3481 ccacaaacat cgagccaggc cgcatcgcga cagacagcat tgcgccacgg agcatcgaca
     3541 cgcgcggcac aggaccgcgg agcggagacg ctcggaaagc tcgaacgcgc tcttctacct
     3601 cggcacacgc agtcatggaa ccacgattgc agcaaatttc gcgagtgcgg cgaaacggcg
     3661 aggctgctat ccagtgcgcc gcacgatcaa tcggaccgga gccatgagca aacccacgcc
     3721 cgaccagccg accgaccgtg accttgcggc cattgtccgc catttcgggc aggcaagaat
     3781 tttggtcatc ggcgatgtga tcctcgatcg ctatcgcatc ggcgaagcgc agcgcctgtc
     3841 acccgaggcg ccgatccccg tgctacgccc cacccgccgc cacgacacgc cgggcggtgc
     3901 cgccaatgtt gccatgaacg tcgccactct gggcgggcat gccgtgctgg ccggggtcat
     3961 cggcgatgac cgggctggca agacggtcgc gcggctgctc gacgaggcgg cttcgatcga
     4021 aaacgcgctg atcgtggcag cggacc
//
LOCUS       DATAVD010000519         8580 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1537979, whole genome shotgun sequence.
ACCESSION   DATAVD010000519 DATAVD010000000
VERSION     DATAVD010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8580
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1537979"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..273
                     /locus_tag="VHX39_09640"
     CDS             <1..273
                     /locus_tag="VHX39_09640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991419.1"
                     /translation="VLAGVAAWFVLPHALFLAVPLGAAASFFVHVWFDRAYHVEGTCL
                     QRFAWFRHKQQLHFVHHVHANTNFAVVDFFWDRVLGTYRKPDETLR"
     gene            complement(285..2645)
                     /locus_tag="VHX39_09645"
     CDS             complement(285..2645)
                     /locus_tag="VHX39_09645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3991420.1"
                     /translation="MADGSGTTGIGAPVRRIEDQRLLTGLGRYSDDLTLPGQAYAVML
                     RSPHAHAEIGTINTDQARAIDGVLAVLTGQDMLADGLQPIPHAVWSGHPAEIPLPNTD
                     GSSASGPSHFCMATTVARHVGDIVAVVVATSLAAARDAAELVAVEYRPLPAVTHALIA
                     VNQDAALAWHEGTSNVCIDSLLGDAAATGAAFAQAAHVVRFDTWVQRVAGVPMEPRAA
                     IGVYDAATRKYTLHAGAGGAIRPRNDLAVVLGVPQSDVRMVMHDVGGNFGTRGAFNPE
                     FALVAWTARRIKSPVKWTSERSEAFLCDYQARDLAVTAELALNATGKFLALRCDNLVN
                     LGAYPVGFSPLQKGAAIVSSIYHVPVVQVRARGAFTNTAPTRPYRSAGRPEVMYVMER
                     LIDLAARQSGIDRIELRRRNLVPESAMPYRNPFGLVYDSGAYHQVMETALRLGDWAGF
                     PTRQAAAEARGKRRGIGIANYVDTATGVPRERAEITVRPEGVVEVVIGTGSQGQGHET
                     SFAQLINEWLGVPNACVRLVTGDTDRVLWGGGAHSGRALRLGSIVMHTASFEIIDKAT
                     RIASHVLEADRSDLVFSEARFTVAGTDRSIGLFEVAAAALTRNDLPEDLIGALDAISD
                     QTIKEASFPYGCHVCEVEVDPETGVVAIVRYTAVDDVGRAVNPMIVHGQVHGGIAQGV
                     GQALWEQVVYDRATGQMITGSFMDYAMPRASGLPFYVTELSEIPCPTHPLGIRPAGEG
                     GTTPALGVVVNAVVDALSGYGVTHIEMPATSERVWQAIQTAASHQV"
     gene            complement(2708..3607)
                     /locus_tag="VHX39_09650"
     CDS             complement(2708..3607)
                     /locus_tag="VHX39_09650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3991421.1"
                     /translation="MQDCAEAISIGDGMGGFIRTYAEPDCDLQEPFDVAVVMPTILRP
                     ELKDALHSIFAQTILGRIHVLIGIDRPAADLSLLDAACEGRPPNCVVQVYYPGYSTSV
                     RHGGLSPARDGGVLRCILSYLANSPYVAYLDDDNWWRPDHLQLLRAAMVQADWAFSLR
                     WFVHPTSRRAICVDQWESLGPGLGAFNGEFGGFVDANCLMLNKVACEPVVCEWNRPLA
                     NDPKGMSADRNVFNVLLRYFRGAATSQPTVFYTMDPDDDRHDVRLLLMGAAYHEAASP
                     HFEAQTGSTIAVNDGRPLLTRPP"
     gene            complement(3661..5127)
                     /locus_tag="VHX39_09655"
     CDS             complement(3661..5127)
                     /locus_tag="VHX39_09655"
                     /inference="COORDINATES: protein motif:HMM:NF014218.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytosine permease"
                     /protein_id="HEX3991422.1"
                     /translation="MQTALHSEAELEEKVRHHYHQPKGVEQFGIEPVPTEKRTVRWFD
                     IFSIIFGFALNPGSILTGGLAVVAGLSVQGAVVSITGGTMLAMVFYVTMATIGADYGI
                     PGQVATRMTFGLRGAKWVPSLLRTIASTYWFAFQTVAGSIAVVAVLYHWTGVKYSLIT
                     VSLIFGCLQAVVAIVGYDSLKYLSRTALPFKILVLGYIMVLLMTQSNPSFAPATVLAY
                     PGLPTSNWALFVLWGNAVAAGSITMVTDAADFCRYTRSRSDMWWGTLGGKFLGAAFAC
                     ILGAYGAAATMGKVANVFDVASGLTDAWPAYVAFLIVIGLDNWTINVLNLYTGGLSLS
                     NMLERLGRFWTTLIISVLGVGLSAVPDVVNSYTSYAGLLGTVFSPITGVLLADYLFMK
                     RSRIDLHALFQRDDIYWYWNGFNPIAILWTALGFAIYTWVIPVGMMKTVSTVLVCGFG
                     YCITVWLVSAFWPALARASHAGEQHETVEQLAWQLVER"
     gene            complement(5581..8370)
                     /locus_tag="VHX39_09660"
     CDS             complement(5581..8370)
                     /locus_tag="VHX39_09660"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HEX3991423.1"
                     /translation="MPDVPLPDQAGLLAQELLELTAQLSASVNENPFGNPVLLLALAI
                     TRRMDQGSLSEDAIARLIRHFREIAFAARAERIADYVGGVDQEQNDATLARLAHHLLR
                     PDPNDSPVRWAEYRALVERSRFAAVFTAHPTFALPFEVGHALAEQASGRPSTIEMSHR
                     PPPITLQAEFAQAVAAIANGRDAIDRFNAALINVARTAWPDRWTELTPRPIILSSWVG
                     YDTDGRTDIGWWDTLRLRLEMKRLQLARLQAQVKGFEPLVTRVAAAEQAVAAQIAACP
                     DSQDPAKTAVFAHTLIGERETAMTSPEPLLPLFDTAIAAAGTEDKLKLAVARAGLVSH
                     GLSLAHTHTRLNAAQLHNVVRQRLGIADPPEDPAHRRALFAAINAALDTVQPIPVDFG
                     ALLAEQASAARLMMTVAQIVKHVDGSAPVRFLIAETETGYTLLTALWLAKLFGIENQI
                     EISPLFETAEALEQGATVLDEALRSPHYRAYLKTTGKLALQFGYSDSGRYVGQLAASY
                     LIERLRLKIGETLARHHVTGVEVILFDTHGESIGRGAHPGSLSDRLKYLSPTASRQAL
                     NRAGLAVREESAFQGGDGYLLFGTPELASATITRIAEQTYHPAAGPIEDPVYAAPDFS
                     ADFFATIRAAMEDLVEDAGYGAILGAFGPALLDKTGSRPSARQSDGVASAARIRHPRE
                     LRAIPNNAILQQLGWCANTLQGLGAAASRHPETFAEMKDNSRRFHRALDLASHGLAHS
                     NADVLRAVVATLDPGTWLDRAARTQMPGRREALVMVARALERLDIWADVQSMFRRISA
                     DHLALRVAWPEAPHMASREILLHALRLALIHRIWLLSTEISDFSPRHGVTRPVLEAAI
                     LRLDIEASLQLLAEIFPVAHDPAADCDYGEPAAPRTTAAYAREHSEIFAPMRRLFEMV
                     REIATVITHEVGAFG"
     gene            complement(8404..8580)
                     /locus_tag="VHX39_09665"
     CDS             complement(8404..8580)
                     /locus_tag="VHX39_09665"
                     /inference="COORDINATES: protein motif:HMM:TIGR01727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX3991424.1"
                     /translation="METIPGTPPNLALLPPGCAFAARCRYARDICTRDDIPVSISPTG
                     AMARCVRAVEVVTA"
BASE COUNT         1746 a         2631 c         2627 g         1576 t
ORIGIN      
        1 gtgctggccg gtgtggcggc gtggttcgtc ttgccgcacg cgctattcct cgcggtgcca
       61 ttgggtgctg cggcgtcgtt cttcgtccat gtctggtttg acagagcgta tcatgtcgaa
      121 gggacgtgtc ttcagcgctt cgcctggttc cggcataagc aacaactaca tttcgtccat
      181 cacgtgcacg cgaacaccaa tttcgcggtg gtcgacttct tctgggatcg cgtattgggc
      241 acttaccgga agccagacga aacattgcgt tgaaccactg tgcttcagac ctgatggctc
      301 gcagcggtct ggatcgcctg ccatacacgt tccgaagttg ccggcatctc gatatgggtg
      361 acgccgtagc ctgaaagggc gtcaacgact gcgttcacca ccacacccag ggccggtgtg
      421 gtgccgcctt cgcccgccgg ccgaatgccc aaaggatgtg ttggacatgg aatttcgcta
      481 agttcggtca cgtaaaacgg cagccccgag gcccgcggca tcgcgtaatc catgaatgag
      541 ccggtgatca tttgaccggt ggcgcggtcg tagacgacct gttcccacaa tgcctgacca
      601 actccttgtg caattccgcc gtgtacctga ccatgcacaa tcattggatt gaccgcccgc
      661 ccgacatcat cgacggcagt gtacctcaca atggccacca caccggtttc gggatcgacc
      721 tcaacttcgc agacgtggca gccataaggg aagcttgcct ctttgatcgt ttggtcgctg
      781 atcgcatcga gcgcgccgat caggtcttcc ggcagatcgt ttcgggttaa cgccgcggca
      841 gcaacttcga acagaccgat cgagcggtcg gttccggcga cggtgaagcg agcttcgctg
      901 aagacgagat cggatcgatc ggcctccagc acgtggctgg cgatcctggt ggccttgtcg
      961 atgatttcga acgatgccgt gtgcatcacg atggaaccca gtcgcagcgc acggcccgag
     1021 tgagcgccgc cgccccacag aacccgatcc gtatcaccgg tcaccaaccg aacacatgca
     1081 ttgggcacgc ccagccactc attgatcaac tgtgcaaaac tggtttcgtg cccctggcct
     1141 tgcgagccgg tgccgataac gacctcgaca actccctcgg gtcttacagt gatctcggct
     1201 cgttcgcgcg gcacgccagt cgcggtgtcg acatagttgg caataccgat gccacgacgt
     1261 ttgccgcgtg cctccgccgc cgcctgccgg gtcggaaatc cggcccagtc gccaaggcgc
     1321 aaagcggttt ccatgacctg gtgataggcg ccgctgtcgt agaccaggcc aaaagggttg
     1381 cgatatggca tggccgattc cgggaccaaa ttgcgccggc gcagttcgat ccgatcgatg
     1441 ccgctctgac gggcggcgag gtcgatcagc cgttccatca catacatcac ctcaggcctt
     1501 ccggcgctgc gataaggccg cgtcggtgcg gtattggtga acgccccacg ggcacgaacc
     1561 tgaaccaccg gcacgtgata aatgctggaa acgatcgcag cgcctttttg caacggactg
     1621 aagccaaccg gataggcgcc gagattgacc agattgtcgc agcgcagtgc caggaatttg
     1681 ccggtggcat tcaacgccag ctccgcggtg accgcgagat cgcgggcctg ataatcgcac
     1741 aaaaaagcct cggaccgttc gctcgtccat ttcactgggc ttttgatcct gcgggcagtc
     1801 caggctacga gggcgaactc cggattgaac gcgcctcttg tgccgaaatt gccgccgaca
     1861 tcgtgcataa ccatgcggac gtcggactgc ggcacaccga gtaccaccgc cagatcgttg
     1921 cgcggacgga ttgccccgcc ggccccggcg tgcagcgtat atttgcgagt cgctgcgtca
     1981 tacacgccaa tcgcggcccg cggctccatc ggtacgccgg caacccgttg cacccacgtg
     2041 tcaaatcgca cgacatgcgc tgcctgcgcg aacgcggcgc cggtcgccgc ggcgtcaccc
     2101 agaagcgagt cgatgcaaac attcgacgtt ccctcgtgcc aggcgagtgc ggcgtcctgg
     2161 ttgacggcga tcagcgcatg cgtcaccgcg ggcagcggcc gatattcgac ggcaacaagc
     2221 tcggctgcat cgcgcgccgc agcgagactg gtggcaacga caactgccac gatgtcgccg
     2281 acgtggcgag cgacggttgt cgccatgcag aagtgcgatg gtcccgacgc ggaggagccg
     2341 tcggtgttcg gcaacgggat ctccgccgga tgcccggacc agacggcatg gggaatcggc
     2401 tgcaacccat ctgccaacat gtcttgcccg gtgagcactg cgagcacacc gtcgatggct
     2461 cgggcctggt cggtgttgat cgtcccgatc tcggcatggg cgtgtggaga gcgcagcatc
     2521 acagcgtacg cctggcctgg tagtgtaagg tcgtcgctgt accgcccgag gccggtcaac
     2581 aggcgctgat cttcgatgcg acgcaccggg gcgccaattc ccgtggtccc gcttccatca
     2641 gccatcggca tcccctgtct cgcgatgatt ctggggcttt agcataaact gggcggattg
     2701 gcgtgggcta cgggggccgg gtcaacaaag gtctcccgtc attgaccgca atggtggaac
     2761 ccgtctgggc ttcgaagtgt ggcgaggcgg cctcgtggta ggctgcgccc atcagcagca
     2821 aacgcacgtc atgccggtcg tcgtccggat ccatggtgta gaaaaccgtc ggttgcgacg
     2881 tcgcggcgcc gcggaaatac cgtaacagca cattgaacac gttacggtcg gctgacattc
     2941 cctttggatc gttcgccagc ggccggttcc actcgcacac cacgggctcg caggccacct
     3001 tgttcaacat cagacaatta gcatcgacaa aaccgccgaa ctcgccgttg aacgcaccaa
     3061 ggccgggtcc caaagactcc cactgatcga cacaaatggc gcggcgggac gtgggatgca
     3121 cgaaccaacg gagtgaaaaa gcccagtcag cctggaccat tgcggcgcgg agcagctgca
     3181 agtgatcggg acgccaccaa ttgtcgtcgt ccagataggc gacataggga ctgttcgcga
     3241 ggtaggataa aatacaacgc aacacgccgc catctcgcgc cggactgagg ccgccgtggc
     3301 ggaccgacgt agaatatccc gggtaataca cctggacaac gcaatttggc ggtcgtcctt
     3361 cgcatgcggc atccagaagc gacaaatccg cggcgggtcg gtcaattccg atcaggacat
     3421 ggatgcggcc caggatggtt tgtgcaaaga tcgagtgaag tgcatccttc agttcaggtc
     3481 gcaagatcgt cggcatgact accgcgacgt caaatggctc ctgcaagtca cagtccggct
     3541 cggcatatgt tctgatgaat ccgcccatgc catccccgat cgaaatcgcc tctgcgcaat
     3601 cctgcatcgg cgaccgggtc cgtcaagcat gggcatagtg atcctacccc ccggcaggca
     3661 tcagcgttcg acgagttgcc aggccagttg ttcaacggtt tcgtgctgct cgccggcatg
     3721 cgaggcacgt gccagagcgg gccagaaggc cgacaccagc caaacggtga tgcaatagcc
     3781 aaatccgcag accaacacgg tggatacggt cttcatcatc cccaccggaa tgacccaggt
     3841 gtagatcgca aagcccagag ccgtccacag gattgcgatg ggattgaagc cgttccagta
     3901 ccagtagata tcgtcgcgct gaaacaacgc gtgcagatca atgcgcgagc gtttcatgaa
     3961 caggtaatct gccagcagga ccccggtgat cggtgagaac acggtgccca acaggccggc
     4021 atagctggtg tagctgttca ccacgtccgg caccgccgac agacccacgc cgagcacgct
     4081 gatgatcaac gtcgtccaga accgcccgag ccgctcgagc atgttggaga gcgataaacc
     4141 tccagtgtac aggttgagga cgttgatggt ccagttgtcc aagccgatga cgatcaggaa
     4201 cgcaacgtat gccggccacg cgtcggtgag gccggaggcc acgtcgaaca cattcgcgac
     4261 cttgcccatg gtggcggcag cgccatatgc gccaaggatg cacgcgaagg ccgcacccag
     4321 gaatttgccg cccagagttc cccaccacat gtcggaacgc gatcttgtat agcggcaaaa
     4381 atcggcggca tccgtgacca tggtgatcga gcctgccgcg actgcattgc cccacagtac
     4441 gaacaaagcc cagttcgacg tgggaaggcc gggataggcc agcactgttg ccggtgcgaa
     4501 cgacggattg ctctgggtca tcagcaacac catgatatag cccagtacga ggattttaaa
     4561 cggcagcgcg gtacgcgaca ggtatttcag gctgtcgtaa ccaacgatcg cgaccacagc
     4621 ctgcaggcac ccgaagatca ggctgacggt gatcaacgag tactttacgc cggtccaatg
     4681 atacagcact gcgacgacgg cgatcgatcc ggcaactgtc tggaacgcga accaataggt
     4741 cgaggcgatg gtccgtaaca gagacggtac ccattttgcg ccccgcagcc cgaaggtcat
     4801 acgggtggcc acctggcccg ggattccgta atcggcaccg atagttgcca tggtcacgta
     4861 gaacaccatg gccagcatcg ttccaccggt aatgctgacc acggcacctt gaaccgacaa
     4921 acctgcgacg accgccaggc ctccggtgag aatcgagccc gggttcagag caaaaccgaa
     4981 aatgatcgag aagatatcga accaccgcac ggtccgcttc tcggtgggca ccggttcgat
     5041 gccgaattgc tcgacgcctt ttggctggtg gtagtggtgg cggactttct cctcgagctc
     5101 ggcttctgaa tgcagcgcgg tttgcatggc gggctcctga tgacaagcgg ccaacacgtt
     5161 ccggaacgta atcgcggttt gagcacgcga tgcagcgttt gcgggtaaag actgttcgga
     5221 cagggttggt gcaggaagca tgccggttcg cgctggtgca gattacgacc gggtcccaca
     5281 acggagcgac aacgttcgac gtccgcgagg ttgcctttcg tgcgcctcag acgaaatgat
     5341 gtgacaggaa gcaatcagat tataaaataa tcagacctgg ctatgggttg ggatccaggt
     5401 cgggagggtc gggtgaaatg aacaataaat ggcctttaat ggaacggtca ctgacgctga
     5461 tatggtctat atgatcaaag tatgatctca tatcgcccag tttccgggcg ctacgaaggc
     5521 gaacgacatt cagcgacgct cgctttgccg ccccgaacct gtgctgatcg agctggcgga
     5581 ttacccgaat gcacccactt cgtgggtgat cacggtcgca atctctcgca ccatctcgaa
     5641 cagccgccgc atgggtgcga aaatctcgct atgttcgcga gcgtacgccg cagtggtgcg
     5701 gggggccgcg ggttcgccgt aatcgcaatc ggcggcggga tcatgggcga ctgggaagat
     5761 ctcagccagc aactgcagag atgcttcaat atccagccgc aggatcgctg cttccagtac
     5821 tgggcgggtc accccgtggc gtggcgaaaa atcggaaatc tcagtcgaca acagccaaat
     5881 gcgatggatc aaggcaaggc gcagagcatg cagcaggatt tcccgtgacg ccatgtgagg
     5941 cgcttcgggc catgccaccc gcagcgccag atgatcggcg gaaatgcgac ggaacatcga
     6001 ttgcacgtcg gcccaaatat ccagccgctc caacgctcgc gccaccataa ccagcgcctc
     6061 ccgccggcca ggcatttgcg tgcgggccgc acggtccagc caggtgccag gatccaatgt
     6121 tgcgacgacg gcgcgcaaca catcggcatt cgaatgcgcc agaccatgcg acgcgagatc
     6181 caacgcacgg tgaaagcgcc ggctgttgtc cttcatctcg gcgaaggttt cgggatgccg
     6241 agacgccgcc gcgcccagac cttgcagtgt gttggcgcac cagccgagtt gttgcaggat
     6301 ggcattgttc gggatggcgc gcagctcgcg cggatgccgg atgcgcgccg cacttgccac
     6361 tccatccgac tgtcgtgccg acggccgcga accggtcttg tcaagcaacg ccgggccgaa
     6421 tgcacccagg atggcgccat aaccggcatc ttccacgagg tcttccatcg cggcgcggat
     6481 ggtggcgaag aaatcggcag agaagtcggg cgcggcgtaa acgggatcct cgattggtcc
     6541 ggctgcggga tgataggtct gctcggcgat gcgggtgatc gtggcggacg ccagttccgg
     6601 tgtgccgaac aacagatatc catcgccacc ctggaacgca ctttcctctc gcactgcgag
     6661 accggcgcgg ttcagggcct gacgggaggc cgtgggcgac aaatatttca gccggtccga
     6721 cagcgacccg ggatgcgcac cgcggccgat gctctcgccg tgggtatcga acaaaatgac
     6781 ttcgacacca gtaacatggt gcctggccag cgtctcgccg atctttaatc gcaacctttc
     6841 gatcagatag ctggcagcaa gctgaccgac atagcggccg gaatcggaat agccgaattg
     6901 cagcgccaac tttccggttg tcttgagata cgcacggtaa tgcgggctgc gcaacgcttc
     6961 atccagcacg gtggcgcctt gttccagcgc ctcggcggtt tcgaacaatg gactgatttc
     7021 gatctggttc tcgatcccga acagctttgc caaccatagc gcggtgagca gcgtgtagcc
     7081 ggtctccgtc tcggcgatca ggaaacgcac cggtgccgat ccgtcaacat gcttcacgat
     7141 ttgcgccacg gtcatcatca gccgagcggc agacgcctgc tcggccaata gcgcgccgaa
     7201 atcgacgggg atcggttgca ccgtgtcgag cgccgcattg atcgctgcga acagggcgcg
     7261 tcgatgcgcg ggatcctcgg gcgggtcggc aatgcccaga cgctggcgaa cgacgttgtg
     7321 caattgtgcg gcattgagcc gagtatgagt gtgcgcaagc gacaggccgt gcgacacaag
     7381 accggcgcgg gcgaccgcca gtttcaactt gtcctcggtt ccggcggcgg caatcgcggt
     7441 gtcgaacagc ggcagcaacg gctcgggcga agtcatcgca gtttcacgtt cgccgatcag
     7501 cgtgtgtgca aaaaccgcgg ttttcgccgg gtcctggctg tccgggcagg cggcgatctg
     7561 cgccgcaacc gcctgctccg ctgctgccac gcgcgtcaca agcggttcga accccttcac
     7621 ctgggcctgc agcctcgcaa gttgcagtct cttcatctcc aatcgcagcc gcaacgtgtc
     7681 ccaccagccg atatctgtcc ggccgtcggt gtcgtagccg acccaactgg acaaaatgat
     7741 cggtctcggt gtgagttccg tccaacggtc gggccacgcg gtacgggcga cattgatcaa
     7801 cgccgcgttg aaacggtcga tcgcgtctcg cccattggca attgctgcaa ccgcctgggc
     7861 gaactccgcc tgcaatgtga tcggaggcgg gcgatgtgac atttctatcg tgctcggccg
     7921 gccgctggct tgctcggcca gggcgtggcc gacctcgaat ggcagagcga acgtgggatg
     7981 cgcggtgaac accgcagcga aacgggagcg ttccaccagc gcacggtatt cggcccaacg
     8041 gaccggcgaa tcattggggt cagggcgcag caggtggtgt gccagccggg cgagggtggc
     8101 gtcattctgc tcctggtcca cacccccgac atagtcggcg atccgttccg ccctggcagc
     8161 gaacgcgatc tcacgaaaat ggcggataag cctggctatg gcgtcttcgg acaaactgcc
     8221 ctggtccatt cggcgggtaa tggcgagggc aagcagcagg accgggttgc cgaacgggtt
     8281 ctcgttcacg ctcgcgctta gttgtgccgt cagctccagg agttcctgag ctagaaggcc
     8341 ggcctgatca ggcagtggaa cgtcgggcat ttggacgcgt acctccaaag gttttctttt
     8401 tattcaggca gtcaccacct cgaccgcccg cacgcagcgc gccattgcgc cggtcggcga
     8461 tatcgacacc ggaatgtcat cccgcgtgca aatgtcgcgc gcataacggc accgcgcagc
     8521 aaatgcgcaa ccaggcggta gcagcgccag attgggcggc gtgcccggaa tggtttccag
//
LOCUS       DATAVD010000520         2653 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1725291, whole genome shotgun sequence.
ACCESSION   DATAVD010000520 DATAVD010000000
VERSION     DATAVD010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2653
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1725291"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            321..1289
                     /gene="lpxK"
                     /locus_tag="VHX39_09670"
     CDS             321..1289
                     /gene="lpxK"
                     /locus_tag="VHX39_09670"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004449103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEX3991425.1"
                     /translation="MHAPAFWTRNGWQARMLAPLSGVGAAITAHRVARTGWLAPVPVI
                     CCGNATVGGAGKTTVAIDLAHRLTARGIAVHVLLRGYGGGARGPRRVQPDDTPVVTGD
                     EALLLAAVAPTWTGADRAASAQAAVAAGAEVLLMDDGLQNPSLEKTIALLVVDGAAGF
                     GNGRVLPAGPLREPIAAAAARCRVAVLIGPDVSGAVAALPPGLPVLRAALVQDAGIAE
                     LCGRRVLAFAGIAFPEKFFAGLERAGVIVVGRVPFADHHGFTGPELAGLVRKATEMDA
                     VLVTTPKDAVRLPVGANVHVVNVHLEWENESVIESLLDDLIASGRV"
     gene            1461..1955
                     /locus_tag="VHX39_09675"
     CDS             1461..1955
                     /locus_tag="VHX39_09675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018096478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3991426.1"
                     /translation="MSGKIVTCLWFDRGEARKAAEFYAATFPDSHVGPAVPAPTDYPG
                     GKQDSEITVEFTVLGQAFVGLNGGPAFKPNEAVSFQVMTDDQAETDRYWNAIVENGGT
                     ESQCSWCKDRWGFYWQIVPRALLAALRDPDRAAAKRAMEAMMTMRRIDIARIEAARAG
                     RTAT"
     gene            complement(1992..>2653)
                     /locus_tag="VHX39_09680"
     CDS             complement(1992..>2653)
                     /locus_tag="VHX39_09680"
                     /inference="COORDINATES: protein motif:HMM:TIGR03621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TIGR03621 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEX3991427.1"
                     /translation="LGLGAGSIKTEYDEAGLSFDPGRTRVERLAESVTIIKRLLKGEP
                     VTFAGRHYCVTGHTIAPPPAQKPHPPILIGGNGPRLLALAAREADIVGFSGLTFRQGG
                     AAPPDLSAWRVAGIDERVQRVRDIAGDERFAQLELNALVQLVAVTDDRRSAAEELAGR
                     WPQLTPDEILQSPYALIGTVDQLVDELRAHRDRWGISYYVVHEPYLEEFAPVVARLAG
                     T"
BASE COUNT          472 a          784 c          868 g          529 t
ORIGIN      
        1 ccgtcagtgt tcctgctgtc cgtgagccat gcattccgat cgctgtcgat cattgagccg
       61 atgttcctct gtgccactaa attaaatact tacctacgcc gaaaccgaca tgcgcggtcg
      121 attagcaaac cgactgcaat ccgatcgcca ttgatctctg tacctctgta cctctgtgcc
      181 tctaaaataa attcttgcgt acgccaaaac cgccataggc gatcgattaa gaagccgtct
      241 acagccatca gccttccgtt gtggcctacg cgttacctaa gtggtgcgtt tcaccgagcc
      301 ccccgggcca cgtggcaatg atccacgctc ctgcgttttg gacgcgtaac ggatggcagg
      361 cgcgcatgct ggcgccgttg tcgggcgtgg gcgcggcgat caccgcccac cgcgtcgctc
      421 ggaccggctg gctcgcgccg gttccggtga tttgttgcgg taatgcgaca gttggcggcg
      481 ccgggaagac cacagtggcg atcgatctcg cacatcgtct gaccgcgcga ggcattgccg
      541 ttcacgtcct gctgcgcggc tatggcggcg gcgcgcgcgg tcctcggcgt gtgcaaccgg
      601 acgacacgcc cgttgtcacc ggcgacgagg cgttgctgct ggctgccgta gctccgacct
      661 ggacgggcgc cgatcgtgca gccagcgccc aggccgctgt tgcggcgggt gccgaggtgt
      721 tgctgatgga tgatggattg caaaatccat ccctggaaaa aaccattgca ttgttggtgg
      781 tggacggagc ggcggggttc ggcaacggcc gggtgctgcc ggccggaccg ctgcgggaac
      841 cgatcgcggc ggcggccgct cggtgccgcg tcgcagtgtt gattggtccg gatgtcagcg
      901 gagcagtggc cgcgctgccg cccggattgc cggtgttgcg tgcggcgctg gtgcaggatg
      961 ccgggatcgc tgagttatgc ggacgccggg tattggcatt tgccggcatt gctttcccgg
     1021 agaaattctt tgctggcctg gaacgggccg gcgttatcgt cgtgggccgc gtgccgtttg
     1081 cggaccacca tgggttcacg ggcccggaac tcgccggtct tgtgcgtaaa gcaacggaaa
     1141 tggacgcggt tctggtaacc accccgaagg acgcggtgcg actgccggtg ggcgcgaacg
     1201 tgcacgtggt gaatgtccat cttgaatggg aaaacgaatc tgtcatcgag agtctgctgg
     1261 acgacctgat tgcctccggc agggtatgag gttgccgtga gggcggtccg gtgccgctgc
     1321 ccagaaaatc cacaccgtgc tgatgtcttg ataaatggat ggcagcacgc cgataacctg
     1381 atcttgcggc ggacctttgt cgacatgctt tgggcacggt gctaccgatg attgtcgtca
     1441 aagccagtga ggaaatttct atgagtggaa aaatcgtcac ctgcctgtgg ttcgatcgtg
     1501 gcgaggcgcg caaggcagcg gaattctatg cagccacctt tcctgacagc catgttggac
     1561 cagcggttcc tgctccgacc gactatcccg gtggtaaaca ggatagcgag ataacggtcg
     1621 agtttactgt cctcggccag gcgtttgtcg gtctgaacgg cggccccgcg tttaagccga
     1681 acgaagcggt gagcttccag gtgatgaccg acgaccaggc cgaaaccgac cgctattgga
     1741 atgcaatcgt cgaaaatggc ggcactgaaa gccaatgcag ctggtgcaag gatcgttggg
     1801 gcttttattg gcagatcgtg ccgcgagcct tgcttgccgc gctgcgggat ccggatcgcg
     1861 ccgctgcgaa gcgagcgatg gaggccatga tgacgatgcg gcggatcgac attgccagga
     1921 ttgaggcagc acgggcgggc cggacggcaa cctgacgccc atcgccactg cctcggtcga
     1981 aacctcggtg ctcaggtgcc ggcgagtcga gcaaccacgg gggcgaattc ttccaggtag
     2041 ggctcgtgga ccacgtaata ggagatgccc caacgatcgc ggtgcgcccg gagctcgtcc
     2101 accaactggt cgacggttcc gatcagcgcg tagggacttt gcaggatttc gtccggagtt
     2161 agctgcggcc agcggcctgc gagttcttca gccgccgagc ggcgatcatc ggtcacggca
     2221 acaagctgca ccagcgcgtt caattccagc tgcgcgaacc gctcgtcgcc tgcgatgtcg
     2281 cgcacgcgtt gcacccgttc atctatgccg gccacgcgcc atgcggaaag atccggcggg
     2341 gcggcgccgc cctgtcgaaa cgtcaggccc gagaacccga cgatgtcagc ctcccgcgct
     2401 gccagagcaa ggaggcgagg gccgttgccg ccgatcagaa ttggcggatg aggcttctgt
     2461 gcgggaggcg gcgcaatcgt gtggccggtc acgcaataat gccgcccggc gaaagtgacc
     2521 ggttcccctt ttagcagacg cttgatgatg gtgactgact ctgccagccg ctcgactctg
     2581 gttcgtcccg gatcgaacga gaggcccgct tcgtcatatt cggtctttat gctcccggca
     2641 cctaagccaa gtt
//
LOCUS       DATAVD010000521         1873 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_978707, whole genome shotgun sequence.
ACCESSION   DATAVD010000521 DATAVD010000000
VERSION     DATAVD010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1873
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_978707"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(189..1013)
                     /locus_tag="VHX39_09685"
     CDS             complement(189..1013)
                     /locus_tag="VHX39_09685"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3991428.1"
                     /translation="MRLGIVTIPRQLPPGEGSMTEHLVNFAQQVEALDFHGLWLTDAF
                     GRGSTTLDPLSAMGVLCAVTKKVELGTCVIQVPIRHPVEHAHRVQTINLLSGGRFRFG
                     VGTGSTKADFDVVQADFDTRFKVLPGMLEVMQRTWNGEAVHGPALSVWPGTEGGPQMM
                     LGAWRSPRWINLAAKLDGWISSGIHSKWEDIEIGLRMYRDAGGKRAIVANIFADFRKN
                     AEGSPIGRPLTISLVGQSPAEARTQLQRLADTGIDDALIVCPFDDPSQLETIRGLA"
     gene            complement(1027..>1873)
                     /locus_tag="VHX39_09690"
     CDS             complement(1027..>1873)
                     /locus_tag="VHX39_09690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007399429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3991429.1"
                     /translation="IKHVVDESAPYETISIDKYTPIIGAEISGVDLNQLSNRQVDEIH
                     RALAENSVIFFRDQQLSQEQHLAFGRNFGELHIHPAAPHAPGHDELMIIHADKSSPRA
                     NGEGWHSDVSCDTTPPMGSILYIRQTPPKGGDTLFSSMYAAYEALSDRMKAYLEGMTA
                     VHDGEENYRGTYAYAGVGDKPTYPRAEHPVIRTHPVTGKKALYVNRGFTKRLLGVPRD
                     ESKAILEYLWDHAENPLFQCRFRWQPNSVAFWDNRCVQHRAMWDYWPHTRSGFRVTVA
                     GDKPY"
BASE COUNT          353 a          586 c          561 g          373 t
ORIGIN      
        1 cgcttttctg gccgggacgg cagcggtgca ggtcgacacc tataacacca gcggcagcca
       61 ggcgatgcat ctgaccgacc agatcgggag cctgaccctg gtcggttacg ttggctccag
      121 cggcggtcat ttgaccacgt gaggtggaaa cgcgcagccc atttctccgg cggtcgtcag
      181 gcgacagatc aggccagccc gcggatcgtt tccagttgcg acggatcgtc gaatgggcag
      241 acgatcagcg cgtcatcgat cccggtgtct gccagccgct gcaactgagt acgcgcttcc
      301 gccggtgact gaccgaccag agagatcgtc agcggccgtc cgatcggcga tccttcggcg
      361 ttcttgcgga aatcagcaaa aatgttggcg acgatcgcgc gtttgccgcc ggcgtcgcgg
      421 tacatgcgaa ggccgatttc aatgtcttcc catttgctgt ggatccccga gctgatccac
      481 ccgtccagct ttgccgcaag attgatccag cgtggactgc gccaggcgcc aagcatcatt
      541 tgcggaccac cttcggtgcc cggccacacc gacaaggccg gaccatgcac cgcttcaccg
      601 ttccaggtcc gttgcatcac ctccagcatg cccggcaaca ccttgaaccg ggtatcgaaa
      661 tccgcctgca ccacgtcgaa gtcggccttg gtcgaaccgg tgccgacacc gaatcgaaac
      721 cgtccgccgg acagcaggtt gatggtttgc acccgatgcg catgctcgac cggatggcgg
      781 atcggcacct ggatgacgca ggtgccgagt tcaactttct tcgtaaccgc acacagcaca
      841 cccatcgcgc tgagcggatc gagcgtggtc gagccccggc caaacgcatc ggtcagccac
      901 agaccatgaa agtccagcgc ctccacctgt tgtgcgaaat tgacaagatg ttccgtcatc
      961 gatccctcgc caggaggaag ctgacgcggg atcgtcacga taccaagacg catagtgtcg
     1021 gctctttcag taaggtttat cgcccgccac ggtcacccgg aaaccggagc gtgtgtgcgg
     1081 ccagtagtcc cacatcgccc ggtgctgcac gcagcgattg tcccagaacg ccaccgaatt
     1141 gggttgccag cggaagcggc actggaacag cgggttttcc gcgtgatccc acagatattc
     1201 aaggatcgcc ttgctctcgt cgcgcggcac gccgagcagg cgtttggtga agccgcgatt
     1261 gacgtaaagc gctttcttac cggtcaccgg gtgagtgcgt attaccggat gctcggcccg
     1321 cggataagtc ggtttgtcgc caacgccggc gtaagcgtag gtgccgcgat aattttcctc
     1381 gccgtcgtgc accgcggtca tgccttcgag gtacgccttc atgcgatcgg acagcgcctc
     1441 gtaagcggcg tacatgctgg agaacagcgt gtcgccaccc ttcggcggcg tttgcctgat
     1501 atacaggatg ctgcccatcg gcggcgtcgt atcgcacgaa acatcgctgt gccagccttc
     1561 gccgttggcg cgcggactgc tcttgtcggc gtggatgatc atgagctcgt catgacccgg
     1621 cgcatgtggc gctgcaggat ggatgtgcaa ttcgccaaaa ttgcggccga acgccagatg
     1681 ctgttcctgc gacaactgct gatcgcggaa gaaaatgacc gagttctccg ccagcgcccg
     1741 atggatttcg tccacctgcc ggttggatag ctggttcagg tcgacgccac tgatctccgc
     1801 gccgatgatc ggcgtgtatt tgtcgatgct gatggtctca tagggcgccg actcgtcgac
     1861 cacatgtttg atg
//
LOCUS       DATAVD010000522         2273 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_420691, whole genome shotgun sequence.
ACCESSION   DATAVD010000522 DATAVD010000000
VERSION     DATAVD010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420691"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..549
                     /locus_tag="VHX39_09695"
     CDS             <1..549
                     /locus_tag="VHX39_09695"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEX3991430.1"
                     /translation="LARVLGLQEAPLPVAWFSVEDSRRAASLLPPDRPVVVLAPTANW
                     APKVWPAERFVALFQRLTETCIPGAVPAVIAGPGETEAAMAKPVLQALPNAIDLVDRL
                     SLPEIAAFLSRASLFVGNDSGLMHFAAAAGAPTLGLFGPTNAVEYGPAGRRRSVVTGT
                     DTQMTSISVNAAVEAAARLLAA"
     gene            546..1127
                     /locus_tag="VHX39_09700"
     CDS             546..1127
                     /locus_tag="VHX39_09700"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HEX3991431.1"
                     /translation="MKSLWLIAWLVVAASHAACAADLFNLDQRYGSIGFSVTNFGTFS
                     SLGSFPRFMGKLLIDRSHPEQTKIDVQADATSIQVPWDSGTELLRGPDFFDIAHYPHV
                     RYVSDAIRGVDPHHFLIQGVLEIRGVRRPLTLDATLEREHTNMANGNEIADFSVTGTL
                     NRSDYGMTSQRIMISDQVTLQIAARIELPPQTK"
     gene            complement(1173..1718)
                     /locus_tag="VHX39_09705"
     CDS             complement(1173..1718)
                     /locus_tag="VHX39_09705"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3991432.1"
                     /translation="MSQTKGRIRHVALSVEDPWETAEFYKDALGLQEVTELDGPLAEG
                     VFLTDGMVNLAILKFKTDEASQGTGKDFVGLHHIGFWVDDVVEQGKIVRGTGAEWIMG
                     DPNNPDGYEVKHLDLSGIIFDIAAHGWAGAQKEPGQAENVIHPNPQRRLAKFDDRRAA
                     AKAKLAARKAKAPAEIAAAAE"
     gene            1789..>2273
                     /locus_tag="VHX39_09710"
     CDS             1789..>2273
                     /locus_tag="VHX39_09710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEX3991433.1"
                     /translation="MSETPAFLDGGRPPVPDIVVPRGVTPFFLPRRPVRGRIVRLGPL
                     ADALLTRHTNHPVVIALTGQALALAAALSTALKFQGSFSLQAKGDGPVRLLLADCTDT
                     GALRGYALVDSARLDALLEINPSPPAATLLGKGFLAFTVDPGTGADRHQGIVAIEGAS
                     LA"
BASE COUNT          368 a          724 c          702 g          479 t
ORIGIN      
        1 ttggcgcggg tactgggctt gcaggaggca cctttgccgg tggcctggtt ctcggtcgag
       61 gacagcaggc gcgccgcctc cctgctcccc cccgatcgtc ccgtcgtcgt cctcgccccc
      121 actgccaatt gggcgcctaa agtgtggccg gcggagcggt ttgtcgccct ttttcagcgc
      181 ctgacggaaa cctgtattcc gggtgcggtg ccggccgtaa tcgcaggccc aggagagacc
      241 gaggctgcga tggcgaaacc ggtcttgcag gctttgccga atgcgatcga cctggtcgac
      301 cgcctcagtt tgccggaaat cgccgcattc ctttctcggg ccagtctgtt cgtgggcaac
      361 gattccggat tgatgcattt tgccgccgct gcgggtgcac caacccttgg tctgttcggg
      421 ccaaccaacg ccgtggaata cggaccggcc ggccgacgtc gtagtgttgt gacgggcacg
      481 gatactcaaa tgacgagcat atcggtgaac gcggcggtgg aggcagcagc gcgactgttg
      541 gcggcatgaa atccctgtgg ctcattgcgt ggttggtcgt ggcagcaagc cacgccgcct
      601 gtgccgccga tttatttaat ttagatcagc gctatggctc aattgggttt tccgtaacta
      661 actttggcac gttttcgtct cttggttcgt ttcctcggtt catgggcaaa ctgctgatcg
      721 atcgctccca tcccgaacaa accaaaatcg acgtccaggc tgacgcgact tcgattcagg
      781 tgccgtggga cagtggaacc gagctactgc gaggcccgga tttcttcgat atcgcccatt
      841 atccgcacgt gcggtatgtc agcgacgcca taaggggtgt cgatccgcat catttcctga
      901 tccagggcgt cctggaaatc cgcggcgtcc ggcgcccgct gactctggac gcgacgttgg
      961 agcgtgaaca caccaacatg gcgaacggaa acgagattgc ggatttctcg gtgacgggga
     1021 cgttgaaccg gtcggactac ggcatgacgt cacagcgcat catgatctct gaccaggtca
     1081 cgcttcagat cgcggcacgg atcgaattgc cgccacagac gaagtgaaat ccggttggcc
     1141 ggcttaatcg ctggccaacc ggtagtggca ggctattccg ctgcggcagc aatctcggcc
     1201 ggcgccttgg ctttgcgcgc ggccagcttt gccttcgctg cggcgcgccg gtcgtcgaat
     1261 ttcgccagcc ggcgttgcgg gttcgggtgg atgacgtttt ccgcctgacc gggctccttc
     1321 tgcgcgccag cccagccgtg ggcggcgatg tcgaagatga tgcctgacag gtcgaggtgc
     1381 ttcacctcat agccatcggg attgttcgga tcgcccatga tccactcggc gcccgtgccg
     1441 cgcacgatct tgccttgctc caccacgtca tcgacccaga agccgatgtg atgcagcccg
     1501 acgaaatcct tgccggtgcc ctgcgacgcc tcatccgtct tgaacttcag gatcgcgagg
     1561 ttgaccattc cgtcggtcag gaacacgccc tcggcgagcg gtccgtcgag ctcggttact
     1621 tcctgcaatc ccagcgcgtc cttgtagaat tccgcagtct cccacgggtc ctcgacgctc
     1681 agtgcgacgt gacgaatacg gcctttggtt tgcgacatgg acaacctcct ggttcctctg
     1741 cgagcagatg gtagccgaaa atggtctcgc cgcctatatg ctgcctgcat gtccgagaca
     1801 cctgcctttt tggatggcgg ccgcccaccg gtgcccgaca tcgtcgtgcc gcgcggcgtt
     1861 acgccgttct ttctgccacg ccgcccggta cggggccgca ttgtgcgtct gggtccgctg
     1921 gctgacgcgc tgctgacccg gcacacgaac catccggtgg tgattgcgct gaccggccag
     1981 gcacttgccc tcgccgcagc cttgtcgacg gcgttgaagt tccagggctc gttcagcctg
     2041 caggccaaag gagacggacc agtccggctg ctgctggccg actgtaccga caccggcgcc
     2101 ctccgtggtt acgcgctggt ggacagcgcg cgactggacg cactgttgga gatcaatcca
     2161 tcgccccccg ccgccacact tctgggcaaa ggcttcctgg cgtttaccgt cgatccgggg
     2221 accggcgccg accgtcacca gggcattgtg gcgatcgagg gcgcgtcgct ggc
//
LOCUS       DATAVD010000523         1651 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2469779, whole genome shotgun sequence.
ACCESSION   DATAVD010000523 DATAVD010000000
VERSION     DATAVD010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1651
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2469779"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..661
                     /locus_tag="VHX39_09715"
     CDS             <1..661
                     /locus_tag="VHX39_09715"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEX3991434.1"
                     /translation="ASGHVTRGYVGVGTQTISAAMAKALHLPETSGALLASVVPGSPG
                     ANAGLQPGDVIEAVNGQKVASPRDLALTVAGVAPGTQAKIRLLRDGQDREVAVTVGEQ
                     PPEKTAQAPAAQDHDTHNKLGLALGPLTPDTRDQLQVPDGQDGAVVRSVRAGSPAEEA
                     GLRPGDIIVGVGNLSVSSPSQASKAIGVALDGKDHAVALRVLRDGEIAFVGVTLDQSA
                     G"
     gene            complement(700..>1651)
                     /locus_tag="VHX39_09720"
     CDS             complement(700..>1651)
                     /locus_tag="VHX39_09720"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3991435.1"
                     /translation="YLSGEITLGALTQSAAAFVQVQVALNWLVDNYARIAEWLASASR
                     VTGLWTAFSDLDASVGIEESERITVEDSPDSDIHLDGLAVAQHDGRIMIDEADTVISA
                     GQKVLLMGESGTGKSTLIRAIAGLWPWGSGSVRLPAGAKTAFLPQRPYLPLGTLRQVL
                     CYPDDGTARDDDTLRQALTRCGLRRLIPRLDDEEKWDKLLSGGEQQRIGFARLLVMQP
                     DIVIMDEATAALDATSQDSMMELFRDELGHATLISVGHRSELEDFHERKLTLHRRATR
                     VEMAAGENIRPANRLSGLLRRTLRPRPSPDPSIPVSGRAD"
BASE COUNT          292 a          536 c          544 g          279 t
ORIGIN      
        1 ggcgagcgga cacgtgaccc gtggctatgt cggggtcggc acccagacga tctctgctgc
       61 gatggccaag gcgctgcacc tgcccgaaac ctcgggtgct ttgttggcca gcgtggtgcc
      121 cggatcgcct ggtgccaatg ccggcctgca accaggcgac gtgattgagg cggtgaatgg
      181 ccagaaggtt gcctcgccgc gtgacctcgc gttgaccgtt gccggcgtcg caccaggcac
      241 gcaagcgaaa atccggctcc tccgcgatgg gcaggaccgt gaggtcgcgg tgacggtggg
      301 cgaacagccg cccgagaaga ccgctcaggc gccggccgcc caggaccacg acacgcataa
      361 caaactgggc ctggctctgg gcccgctgac gccggatacg cgcgatcaac tgcaggtgcc
      421 ggatggtcag gacggcgcag tggtgcgttc cgtccgcgcc ggttcaccgg ccgaggaagc
      481 tggcctgcgt cccggtgaca tcatcgtcgg ggttggcaat ctgagcgtca gctcgccatc
      541 gcaggcgagc aaagccatag gtgtggcact ggacggcaag gaccacgccg tggccctgcg
      601 tgtgctgcgc gacggagaga tcgcctttgt cggcgtcact ttggaccaat cggccggctg
      661 accgaccggg cggattgccc gtccaccgcg atggcctggt caatcggctc ggccggagac
      721 cgggattgac ggatccggcg acggccttgg ccgcaaggtc cggcgcaaca gcccggaaag
      781 ccgatttgcc ggtcggatat tttcgccggc ggccatttct acccgcgtcg cacgccggtg
      841 caaggtcagc ttgcgctcgt gaaagtcctc caactcggac cgatggccaa cgctgatcag
      901 tgttgcgtgg ccgagctcgt cgcggaacaa ttccatcatc gaatcctgac tggtcgcgtc
      961 caaagcggcc gtcgcctcat ccatgatgac gatatcgggc tgcatcacca gcaatcgagc
     1021 gaagccaatg cgctgctgct cgccgcctga cagaagcttg tcccactttt cctcgtcatc
     1081 gaggcgcgga atcaggcgcc tgaggccaca ccgtgtcagc gcctgccgca acgtgtcatc
     1141 gtcccgcgcg gtgccgtcat cggggtagca caggacctgg cgcaacgtgc cgagcggcaa
     1201 atatggccgt tgcggcagga aggcggtctt ggcaccggcg ggcagacgca cactgccgga
     1261 gccccagggc cacagcccgg cgatggcccg gatcagcgtg cttttgccgg tgccggactc
     1321 gcccataagc aaaacctttt ggccggcgga aatcaccgtg tccgcctcat cgatcatgat
     1381 ccggccgtca tgttgcgcga ctgccagacc gtcgagatga atatcgctgt cggggctgtc
     1441 ttcgacggta atgcgttcgc tttcctcgat accgaccgag gcgtccaggt cggaaaacgc
     1501 agtccacagg ccggtcaccc ggctggccga tgccagccat tcggcaatgc gcgcataatt
     1561 atcgaccagc cagttcaacg ccacctggac ctggacgaag gcagcggccg attgcgtcag
     1621 ggcgccgagg gtgatttcgc cgctgaggta a
//
LOCUS       DATAVD010000524         3802 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1538384, whole genome shotgun sequence.
ACCESSION   DATAVD010000524 DATAVD010000000
VERSION     DATAVD010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3802
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1538384"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..273
                     /locus_tag="VHX39_09725"
     CDS             <1..273
                     /locus_tag="VHX39_09725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991436.1"
                     /translation="LAAVDPTVNLEFNAHLLDIAMQLRLTIIECPITFHPRVGESKGG
                     NTSNLRALKVGLRMVLGIIFGWRFLRSQERFNQFGHSALAIDRSYH"
     gene            290..1699
                     /locus_tag="VHX39_09730"
     CDS             290..1699
                     /locus_tag="VHX39_09730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991437.1"
                     /translation="MSAQFETLGNASVIVFEGATPVLATDPWLTGTCYFGSWALDHPL
                     SRQQIQNFIDAEWIWISHGHPDHLHDASLSILPAGKKVLLPDHYDDDIACDLRDRSFD
                     VTVLPYRAWYSLTPGTRVMCIDNFNQDAILVIEADGALIIDLNDSPLCGEFDFLRRLI
                     RRYPREKTYLLALCSVDADMFNFVDQDGQSLVGPPEERKPGAVWTVARTAAQLGVGNF
                     CCSSSQHIYVRADSVWANPHRIGWADMRRYWSRPEVNLIEPFVTVDPASSEYVRNHPA
                     QISDESQITATTADDNWASRLSKAEWDRVAAFVRKFQLIKRYIDFVEFQVGGEVRRIP
                     LGHRGVAANARGIVFHLPKQSLLTTVEYGYLDDLLIGNFMQVRLENCKLYPRFTPLVA
                     KVGGNAKVYTPGQYYRFAWRYFRRNPVGMIGYWSQIEWEQIVLPGLRTLSERLGVKRP
                     LKYLYRRWLGDPVGTGKPV"
     gene            complement(1702..3723)
                     /locus_tag="VHX39_09735"
     CDS             complement(1702..3723)
                     /locus_tag="VHX39_09735"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3991438.1"
                     /translation="MQSSVSVIIPAYNAGQRIARAITSALTQTRPVLEIIVVDDGSTD
                     DTIEVAAGFGPPVRVTSKPNGGPAAARNLAASLAQGDWLAMLDADDWWFPRKNEIQLA
                     HMAGEDIGLSHCRLDHRTERPSDELTFDDLWERNWISNSSVLLRRRIFDAVGGFAEQR
                     QLVEDYNLWLRISATGTRIVTCPHILLHYTQGIGLSANPEWLMSASLSNVDDLERRLG
                     LPAKMAERKRRQIRTEFRRLALLECDTRPGRSLLRRIFRDEPGVTNGIFLTAGTLFAP
                     ALNLKHTQEKRRQRVRTNQVTLEDTQESGFAERRIPVAETPFWNDNGTYGQGSSAVAH
                     LPTATCTLPTPLLVTTVDAEENFDWSGPFIRTASRVTSMRSQHKAHRVFERYGVIPTY
                     LVDFPVASQDAGREPLRELLQAGVCEIGAQLHPWVTPPFVEVISKRNSYPGNLPMVVE
                     YDKLLALTNMLQEAFGIRPRIYRAGRCGFGPNTGEILRHLGYLVDSSIMPYWNYGPQS
                     GPDFRAFGAEPYWIDRDRTVLEMPISVALVGRAARVGPSMSFGLFNPVSERAGLTAAV
                     ARLGLIERIRLTPEGIDIDEAKRLVRQMIADQHRVFVLTYHSPSLEPGSTPYVRTATD
                     LAHFLAWLENFYDFFTKEIGGRCVSWRDVRDALLPSRPTVSQSESAAVG"
BASE COUNT          778 a         1136 c         1099 g          789 t
ORIGIN      
        1 ctcgccgcag ttgatcctac tgtcaacctt gagttcaatg cgcatctgct cgatatcgcg
       61 atgcagctgc gactgaccat cattgagtgc ccgatcacct ttcatccacg agtgggtgag
      121 agcaaaggcg gcaacaccag caatcttcgc gccttgaagg tcggcttgcg catggtcctg
      181 ggaatcatat ttggttggcg ctttttgcgc agccaggagc gatttaatca attcggccac
      241 tcggcgcttg ccatcgacag gtcgtaccat tgaacagcgg acccggccca tgagcgcgca
      301 atttgagact cttggcaacg ccagtgtcat cgtttttgag ggcgcgaccc cggttctggc
      361 gaccgatccg tggctgaccg ggacgtgcta tttcggcagt tgggccttag atcatccact
      421 ttcgaggcag caaattcaaa attttatcga cgccgaatgg atctggattt cgcacggcca
      481 tcctgaccat ttgcacgacg cgtctctgag cattctgccg gcgggcaaga aggttctgct
      541 gccggatcac tatgacgacg atatcgcatg cgatctccga gatcggagtt tcgacgtcac
      601 cgtcctgccg tatcgcgcct ggtattcgct gacacctgga actcgcgtca tgtgcatcga
      661 caatttcaat caggatgcaa ttctggtcat tgaggccgac ggcgcgttga ttatcgacct
      721 gaatgactcg ccgctctgcg gggaattcga cttcctgcgg cggctcatcc gtcgttatcc
      781 gcgtgaaaag acgtatttgt tggcactttg ctcggtcgat gcagacatgt tcaatttcgt
      841 cgatcaggac ggtcagtccc ttgtcgggcc gcccgaagaa cgcaaacccg gggccgtgtg
      901 gaccgttgcc aggaccgccg cgcaattggg cgttggcaac ttctgttgct cctcatcaca
      961 gcacatctac gtgcgagctg attccgtatg ggccaatcca catcgaatcg gttgggccga
     1021 tatgaggcga tactggtccc ggcccgaggt taacctcatc gagccatttg tcaccgtcga
     1081 tcccgccagc agcgaatatg tccgcaacca tccagcccag atttccgacg aaagtcagat
     1141 caccgccacc acggcggacg acaattgggc gtcccgcctg tccaaagcag agtgggatcg
     1201 tgtcgcagcg ttcgtgcgga agttccagtt aatcaaacgg tacatcgact tcgtggaatt
     1261 tcaggtcggt ggcgaggtcc ggcgcatccc gctcggccac cgtggcgttg cggcgaacgc
     1321 caggggtatc gtatttcatc tgccaaagca gtctctgctg accacggtgg agtatgggta
     1381 cctcgacgac cttctgatcg gcaatttcat gcaggtccgc ctggagaact gtaaattgta
     1441 tccgcgattt acgccgctgg tggcaaaggt cggcggcaat gcgaaagtct atacacctgg
     1501 gcaatactac cgctttgcgt ggcgctattt ccggcgcaat ccggtcggca tgatcggtta
     1561 ttggtcacag atcgaatggg aacagattgt gttgccgggg ctccgcacat tatcggagcg
     1621 cctgggagtc aagcgcccgt tgaagtatct ttatcggcga tggctaggcg acccggttgg
     1681 caccggaaag cctgtgtaac gttacccgac tgcagccgac tcggactggc tgacggttgg
     1741 ccgggatggc agcagggcat cacgcacatc gcgccaactc acgcaacggc cgccgatttc
     1801 cttggtgaag aagtcataga agttctccag ccatgccagg aaatgcgcga ggtccgtcgc
     1861 agttctgaca taaggtgtac tgccaggttc cagtgatggg ctgtgatagg tcagcacgaa
     1921 gacacgatgc tgatcggcaa tcatttgccg aaccaaccgc ttagcctcgt cgatgtcgat
     1981 gccttcggga gtcagtctga tgcgctcgat caagcccagt cgggcgactg ctgcggtcag
     2041 accggcccgc tcactgactg ggttgaacaa gccaaacgac atcgacggtc caacgcgtgc
     2101 cgcccgccca accaacgcca cggaaatcgg catttccaac actgtccggt cgcgatcgat
     2161 ccaatacggt tcagcaccga aggcgcggaa atcagggcca ctctgcggtc cgtaattcca
     2221 gtaaggcata atgctggaat caaccaaata tccgagatgg cgtaggattt ccccggtgtt
     2281 cggaccaaaa ccacaacgcc cggcacggta aatgcgcggc cgaataccga acgcctcctg
     2341 caacatgttc gtcaacgcca gcagcttgtc gtattccacc accatgggca gattgccggg
     2401 ataactgttg cgcttcgata tcacctcaac gaacggcggc gtgacccacg ggtgcaactg
     2461 cgcgccaatt tcgcaaacgc ccgcttgcag caattcccgc agcggctcac gcccagcgtc
     2521 ctgggacgca acgggaaagt cgaccagata ggttgggatc acaccgtaac gctcaaacac
     2581 ccggtgcgcc ttgtgctgcg atcgcatcga tgtgacccgc gaggcagtgc gaatgaacgg
     2641 gccgctccag tcgaagtttt cctctgcatc gaccgtcgtc accaatagcg gtgtcggcaa
     2701 ggtgcatgtg gcggtgggta gatgcgcaac ggcagatgat ccctggccgt acgttccgtt
     2761 gtcattccaa aatggagttt ccgccacggg gatgcgccgc tccgcaaacc cactctcctg
     2821 cgtatcctcg agcgtcacct ggtttgtgcg gacccgctgc ctgcgctttt cctgagtgtg
     2881 cttcaggttc agcgccggag cgaacagcgt tccggcagtc aggaaaatgc cgttggtaac
     2941 gcctggttcg tcacggaaaa tccgccgcaa caaggatcgt ccaggcctgg tatcgcattc
     3001 cagaagcgcg agccggcgga actcagtgcg gatttgccgc cgcttacgct cagccatttt
     3061 cgctggcagg ccgaggcgcc gctccagatc gtcaacgttg gacaacgagg cgctcatcaa
     3121 ccactccggg ttcgccgaca gtccgatgcc ctgggtataa tgcagcagaa tgtgcggaca
     3181 cgtgacgatg cgcgtgccgg tggcggaaat ccgtaaccaa agattgtaat cctcaaccag
     3241 ctgacgttgc tcggcaaagc cgcccaccgc gtcgaaaatg cgccgacgca acagcaccga
     3301 ggagttgctt atccagttgc gttcccacaa atcgtcaaaa gtcagctcgt ccgatggccg
     3361 ttcggtgcgg tgatccaacc ggcaatgcga cagtccgatg tcctcgccgg ccatgtgggc
     3421 gagctgaatt tcattcttgc gggggaacca ccagtcgtcg gcgtccaaca tggcgagcca
     3481 atcgccttgc gcgaggctcg ccgcaagatt gcgggcggcg gcgggcccac cattcggttt
     3541 gctggttact cgcaccggcg gaccgaagcc ggcggccact tcaatcgtgt cgtccgtcga
     3601 gccgtcatcc acgacgatga tctcaagcac cggccgggtc tgggtcagtg cgctggtaat
     3661 cgcgcgcgcg atccgttggc cggcgttata ggccggaatg atgacgctaa ccgaagactg
     3721 cactgcggag cctccgctcg cgccacgctc ggcaatgggg aggcgtcatt agtgtgcccc
     3781 gagaagcaag gcctgtttcc at
//
LOCUS       DATAVD010000525         5400 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3400170, whole genome shotgun sequence.
ACCESSION   DATAVD010000525 DATAVD010000000
VERSION     DATAVD010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5400
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3400170"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(196..669)
                     /locus_tag="VHX39_09740"
     CDS             complement(196..669)
                     /locus_tag="VHX39_09740"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3991439.1"
                     /translation="MSLGSETEAKALQPVITRPGDAEQIRPFGIDMKVMLGAEHTGGT
                     FSAIVGELKPGEGPPPHLHRDREEYFFVLEGTYSLTVNGNESSIGPGTMVFVPRGTVH
                     TFKNTSSSMGRLLEWTIPGDNGDYFRAMHKMETDGGFNPETFAEINQRYVTEFVE"
     gene            864..2510
                     /locus_tag="VHX39_09745"
     CDS             864..2510
                     /locus_tag="VHX39_09745"
                     /inference="COORDINATES: protein motif:HMM:NF004780.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX3991440.1"
                     /translation="MPSDYATNEYPVIIAGAGPVGLTLAIDLGRRGVRCLILERHPTT
                     LPWPKMDRSNARTMEFYRRIGIVDRVRALGYPPDNPMDVFLTTRLSDKPIATLKYPSV
                     AERRKQIAESPNGAWLLEPYQLVSQNKLEPLLKEVAEATPNVTVRYGLELFQFNQDAC
                     GVTVQARPTAGNTETLRCSYLAGTDGGTSTVRKLLDIKLEGRGRIRDLVQVIFWAPDL
                     YERIVTGKGRHYQFADANGSSMIAQGDRKEFTLHSTLPADTDFVPIIRDLIGFPCDFE
                     VRHVIPWSHHLLVAERYRDRRVFLAGDAIHLVIPTGGLGMNTGVGDAFDLSWKLAGVI
                     NGWGGPGLLDGYEQERRPIGVRNVEAAGWASAGVPIWRALVTPAVYHDTPEGEAVRKA
                     LAASFDINHRRMHGMVGVESNYSYAGSPLIADEPGNIAEWETSRYEPHARPGVRIPHM
                     WLKDGRALQDVLGPDYTLLDLRGDCNAGPLAEAFRALGAPLDVLHLDEERVRNVCDAS
                     VFLLRPDLHIAWRGDGPPRDPEALAAMATGRKQTATAAVG"
     gene            complement(2698..2985)
                     /locus_tag="VHX39_09750"
                     /pseudo
     CDS             complement(2698..2985)
                     /locus_tag="VHX39_09750"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
     gene            3213..4331
                     /locus_tag="VHX39_09755"
     CDS             3213..4331
                     /locus_tag="VHX39_09755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX3991441.1"
                     /translation="MKIFEITNVDFSLHHFLLPLMREIRARGHEVIGACAEGAFLDGP
                     RAEGFRIVAVPFERRASPLAHWRAFRFLVRLFREEKPDLVHAHMPISGFLARMAAWWA
                     GVPQIACTCHGFWFNNPGNPARRAVGFLMEWIAARVTTVFLTVSEEEAQDARRLWISR
                     NAVAVHNGRDPAVFRPDPAGRQRVRNELKVPDGQVVIIAVSRLVRHKGFPELAAAMRD
                     VLDAEVWVVGERLCSDRGDDMASLLRNAGLGTRLRLLGYRTDVAALLAAADIFVLPSH
                     FEGLPMSVIEAMLTGLPVVATNIRGPREQVVPEVTGLLVPPGSVAPLAAALRRLTDDP
                     ATRAAMGEAGRTRALDLYDEAKVLARTMALLGILDQAR"
     gene            4497..4727
                     /locus_tag="VHX39_09760"
     CDS             4497..4727
                     /locus_tag="VHX39_09760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991442.1"
                     /translation="MAFETVTDSYMVTTSEWQVPAPTIASYDLNKVMEAARGWQEKAA
                     AAPDPAASEVYRRSAAQFERLVTRSLDTPPIC"
     gene            4809..>5400
                     /gene="purH"
                     /locus_tag="VHX39_09765"
     CDS             4809..>5400
                     /gene="purH"
                     /locus_tag="VHX39_09765"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010667931.1"
                     /note="involved in de novo purine biosynthesis; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEX3991443.1"
                     /translation="MAMQDIVPIKRALISVSDKSGLVAFAQALAARGVEILSTGGSAQ
                     ALRDSNVPVKEVAEHTGFPEILDGRVKTLVPQIHGGILGRRDSPEHLAQMAEHDIAPI
                     DLVAVNLYPFEATVAKGAPDAECVENIDIGGPALIRAAAKNHDFVVVLTDPGQYDTVL
                     TELDAHGGTVLALRRRLAGEAYARTAAYDSAIASWFA"
BASE COUNT          976 a         1723 c         1649 g         1052 t
ORIGIN      
        1 tgtgctggcg gttcggccgt attgccacac caacgattat tggcaggttt atttcgatac
       61 caataagctg attgccgcga ccttcggcac ggccggctat ccgccgccgt atatcgtgca
      121 ggagtatcgg gcaaggcccg cggcaaacga ggcgcaggcg taacccgccg ggatacgcct
      181 gctcaacgct cttcgctact caacgaactc ggtaacatac cgttggttga tttcggcgaa
      241 cgtctcgggg ttgaagccgc cgtcggtttc catcttgtgc atcgcccgga aatagtcgcc
      301 gttatcgccc ggaatggtcc attccagcag tctgcccata ctgctcgacg tattcttgaa
      361 cgtatgcacc gtaccgcgcg gcacaaacac catcgtgccc ggaccgatcg aggactcgtt
      421 gccgttcacg gtgagggaat aggtgccttc caacacaaag aagtactctt cccggtcgcg
      481 gtgcaaatgc ggcggaggcc cttcgccggg ctttagctcg ccaacgatgg ccgaaaacgt
      541 tccgccggtg tgttcagctc ccaacatcac tttcatgtcg atgccgaacg ggcggatctg
      601 ctcggcgtcg cccggccgcg tgataaccgg ctgcaaggct ttggcttcgg tctcagaccc
      661 caggctcatg gttctctcct gtttcaatgc gtgcttactg cggccggagc ttgtatcggt
      721 caatgccggc gatgcgccgc atctcgcacg tagcctgccg agcatgtcaa gcattgcgtg
      781 caacccggca acgcccatgc gggcgttgtt ggaccattcg gcgcgccggc ataggatcgc
      841 cgcagtcgga aggaacgcca gcgatgccct cggattacgc aaccaacgaa taccccgtca
      901 tcatcgccgg cgctgggccg gtcggcctga cattggccat cgacctcggc cgtcgtggcg
      961 tccgctgcct gatccttgag cgccacccga ccactctacc ctggccgaag atggatcgct
     1021 ccaacgcccg caccatggag ttctaccgcc gcatcggcat cgtcgaccgg gtccgcgctc
     1081 tgggctatcc gcccgacaac ccgatggacg tgtttctgac cacaaggctc agtgacaagc
     1141 cgatcgcgac gctgaaatac ccctccgtcg ccgagcgccg caagcagatc gccgagtcac
     1201 cgaatggtgc ctggctgctg gaaccatacc aactcgtttc gcagaacaag ctcgagccgc
     1261 tgctcaagga agtcgccgag gcaaccccca acgtcaccgt ccgctacggt ctcgaattgt
     1321 tccagttcaa tcaggatgcc tgcggcgtaa cggtccaggc ccgccccacg gccggcaaca
     1381 ccgaaacgct gcggtgcagc tatcttgccg gcacggacgg cggcacctcc accgttcgca
     1441 agttgcttga cattaaattg gagggacgcg gccggatccg cgacctcgtc caggtgatct
     1501 tctgggcgcc ggacctgtac gagcgcatcg tcaccggcaa aggccgccac taccagttcg
     1561 ccgacgccaa tggctccagc atgattgcgc aaggcgatcg aaaagaattc actttgcatt
     1621 ccacgctgcc ggccgacacc gattttgtcc ccattatccg tgacctgatc ggcttccctt
     1681 gcgatttcga agtccgccac gtcatcccct ggagtcacca cctgctggtg gccgaacggt
     1741 atcgcgaccg tcgggtcttt ctcgccggcg atgcgatcca tttggtcatc ccgaccggcg
     1801 gcctcggcat gaacaccggt gttggcgacg cctttgatct gtcctggaaa cttgccgggg
     1861 tgatcaacgg ctggggtggc ccaggcctgt tggacggtta cgagcaggag cgccggccga
     1921 tcggtgtccg taacgtcgag gcagccggtt gggcgtcggc gggtgtgcca atctggcgcg
     1981 ctttggtcac accggcggtg taccacgaca cgcccgaagg cgaggcagtt cgcaaggcgc
     2041 tggccgcatc tttcgatatc aatcatcggc gcatgcacgg catggtcggg gtcgaatcga
     2101 actattccta cgccgggtcg ccgttgatcg ccgacgaacc gggcaatatc gccgaatggg
     2161 agaccagccg ttacgagccg catgctcgtc ccggtgtccg tatcccacac atgtggctga
     2221 aggatgggcg cgcgctgcag gatgtgcttg gcccagatta cacgctgctc gatctgcgcg
     2281 gcgactgtaa tgccgggcca ctggcggagg cgttccgcgc gcttggcgca ccgctcgacg
     2341 tgttgcatct ggacgaggag cgggtgcgca acgtctgcga cgcctcggta ttcctgcttc
     2401 ggcccgacct gcacatcgcc tggcgcggcg acggcccgcc gcgagacccc gaagcgctgg
     2461 cagcgatggc caccggccga aagcagacag cgacggccgc agtcggctga aacaaccttt
     2521 gcgccttttt gcggtccttt gcgttattct ttcttttgcg gactgatcac cgatcgtacg
     2581 acatcgcggc gcgaacaaag caaaacgcaa aaaaagcgca aaggaccgcg aaaaggcgca
     2641 aataaggtcg ttggtcgcaa tcagcggtgc agcgcgaaaa caaaatcctg ccagcgccta
     2701 tttcacagtc ccgactgtca gcccttgcac cacgaagcgt tgtccaaaca acatcagcaa
     2761 caacgccggg atggtcgaga tggccgccgc cgccgccatc tggccgttct ggatttcata
     2821 ttgctgcaca aactgcgcga tccccaccgg taccgtcgcc gcgttgcctg acgtgagatt
     2881 caacgcgatt gaaaattcat tccagctgaa aacgaatgcc agcacgcctg ccgcgatcaa
     2941 ccccggcacc gccagtggca agatcacccg cataaatgat tgggcgcgag gaagccggtt
     3001 tgcgccagcg ctggctcaac ggcagatgca agcagcgcgg cggacagcaa aatagcgcgc
     3061 cataatgaag ccaacacgtg cgcctccccg atcagcggat ttgtccgcct tgccgaaccc
     3121 gtccgggcag gatatcggct cgggcgtggc ctggataccc tgccggagcg gcggatgacc
     3181 ggcgcgcatc gcacccggga tcagccgcag gcatgaagat tttcgagatt accaacgtgg
     3241 atttctcgct gcaccacttc ctgctgccgt taatgcggga aatccgtgcg cgcggccacg
     3301 aggtgatcgg tgcctgtgcc gaaggcgcgt ttctcgatgg tccccgcgcc gagggatttc
     3361 ggattgtcgc tgttccattc gagcggcgtg cctcaccgtt ggcgcattgg cgtgccttcc
     3421 ggttcctggt ccgtttgttc cgcgaagaga agcctgacct tgtgcacgcc catatgccga
     3481 tcagcggttt tctggcgcgg atggccgcgt ggtgggccgg tgtgccgcag attgcctgca
     3541 cttgtcatgg gttctggttc aataaccccg gcaatccggc ccgtcgcgcc gtcggtttcc
     3601 tgatggagtg gattgccgcg cgtgtcacca ccgtcttcct gaccgtatcg gaagaggaag
     3661 cgcaggacgc tcgccgtctt tggatcagcc gcaacgcggt tgcggtgcac aacggccgag
     3721 atcctgccgt gttccgtccc gatccggctg gccgccagcg ggtccgcaac gaactgaagg
     3781 tgccggacgg ccaggtcgtg atcatcgccg tatcccggct ggtgcgtcac aagggttttc
     3841 cggaattggc cgctgccatg cgtgatgttc tggacgcgga agtgtgggtc gtgggcgaac
     3901 ggctttgctc cgaccgcggc gacgatatgg caagcttatt gcgcaatgcc ggtctcggca
     3961 cccggttgcg gctgttgggc taccgtaccg acgtcgccgc gctattggca gcggcagata
     4021 tctttgtcct gccaagtcat ttcgagggac tgccgatgtc agtgatcgag gcgatgctga
     4081 ccggacttcc ggtcgttgcc accaacatcc gtggcccgcg cgagcaggtg gtgccggagg
     4141 tcaccggatt gttggtgccg cctggatcgg ttgctccgct ggctgcggcg ctgcgccgcc
     4201 tgacggatga tccggcaacg cgtgccgcga tgggtgaagc cggccggacg cgcgcgctgg
     4261 acctgtatga cgaggcgaaa gtgttggccc ggacaatggc cttgcttgga attctcgatc
     4321 aggcgcggta agcgaaccaa aaattcgatt ctcatcctcg tttgtgactt ccctcacagc
     4381 gcaacgtttc caaatctgta tcatctccgt cgtgggcgga ccaacgatcc gcagacactg
     4441 ttcagtgaca ggggcaaacc atggcgcttc attatggtgc tgacgagcct cgcgttttgg
     4501 cattcgagac cgtcacagac tcctacatgg tgacaacgtc ggaatggcag gttccggctc
     4561 caacgatcgc ctcctatgat ctcaacaaag tcatggaagc ggcgcgcggc tggcaggaga
     4621 aggccgctgc cgcgcccgac cccgcggcca gcgaagtgta ccgtcgcagt gccgcgcagt
     4681 tcgaacgtct ggttacgcgc tcgctggaca ccccgcccat ctgctgatct ccctgtggcg
     4741 ggttcgcgca gcggcttttg cgccggccgc ggttcagtgt atccccggtc ctgcaaccga
     4801 acccgggtat ggccatgcaa gacatcgtcc cgatcaaacg cgcactgatc tccgtttccg
     4861 acaaatcggg cctcgtcgcg ttcgcgcagg cgctggcggc gcgcggcgtt gagatcctgt
     4921 cgaccggcgg ctcggctcag gcgttgcgcg acagcaacgt tccggtcaag gaagtggccg
     4981 agcataccgg ctttccggag attctcgacg gtagagtgaa gacgttggtg ccgcagatcc
     5041 atggcggcat ccttggccgc cgcgacagtc cggagcatct ggcgcaaatg gcggaacatg
     5101 acattgcgcc catcgatctg gtggcggtca acctgtatcc gtttgaggca accgtcgcca
     5161 aaggtgcccc tgacgccgaa tgtgtcgaaa acatcgacat tggcgggccg gcactgatcc
     5221 gtgcggcggc gaagaaccac gatttcgttg tcgttctgac agaccccggc cagtacgata
     5281 ccgtgctgac cgagctcgac gcgcatggcg gcaccgtgtt ggcgttacgc cgccggctgg
     5341 ctggcgaggc ttatgcgcgc accgccgcct atgactctgc catcgcgagc tggttcgccg
//
LOCUS       DATAVD010000526         6193 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_420914, whole genome shotgun sequence.
ACCESSION   DATAVD010000526 DATAVD010000000
VERSION     DATAVD010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6193
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420914"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..593)
                     /locus_tag="VHX39_09770"
     CDS             complement(<1..593)
                     /locus_tag="VHX39_09770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HEX3991444.1"
                     /translation="MSDTVRNRPSPDALLAQAEAETRGKLKIYLGAAPGVGKTYEMLS
                     DARRKRADGVDIVAGIVETHGRIETKQLCEDLEILPRRKVAYKGRELEEMDLDALLQR
                     RPGIALVDELAHSNAEGSRHPKRWMDVEELIAAGIDVWTTLNIQHVESLNDIVARITR
                     VRVRETVPDAIIERADEIELIDLTPDQLIERLREGKV"
     gene            1056..1544
                     /locus_tag="VHX39_09775"
     CDS             1056..1544
                     /locus_tag="VHX39_09775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012978055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX3991445.1"
                     /translation="MKDFAIDRRFVFVFRLLMGWVFLYAGLSQVLSHDFTTTQFLSHT
                     KTFHELYEPLTSPVIAPYLTFLVSWGHLLIGLSLVSGLLVRVSGPFGVALMLTYWTAH
                     MDFPYIESHVNLLVDYHIVYAVLITYLVVANAGHAFGLDGWIAEKLAAQRTIGPMRPV
                     AS"
     gene            complement(1610..2011)
                     /locus_tag="VHX39_09780"
     CDS             complement(1610..2011)
                     /locus_tag="VHX39_09780"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX3991446.1"
                     /translation="MRSIIQQSVILAAPAQSLYAMYLDPVIHAEITGAPVAIDTQPGT
                     PFRAFEGSLSGQMLTVVEPRLIIQSWRSVHFNDGDPDSTLILTFTPEGAAGRIDLIHL
                     DVPSHDYLGVTDGWETHYWAPWRRYLARDGA"
     gene            complement(2075..4525)
                     /locus_tag="VHX39_09785"
     CDS             complement(2075..4525)
                     /locus_tag="VHX39_09785"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3991447.1"
                     /translation="MSDRNGLSSLLTDRKINTKVNLGFLCVLAILVVTSATAYFAFND
                     AAAGFATYTQRVTVVGIAREIDRSFLELRRNAREYAITAADAKAAAVRSEAEHLRGLL
                     GQGLTEIKNPERHAKIEEIGTLTDVYLHSFDRVVTSTQVAAKANSNSLPAAGTAVART
                     LADLIADATKADNAEVVVLGQQVDRLVLLARVASARQIGRLGGDAASVADKSFSAAAD
                     TLRQICDITEGTPLAGKCQTTLASLADFQQSKNQVVAGQTEVSRLIDGEMRSSGNQIQ
                     QDAEAIRDSGIAEEAAQERLTMATLEQTRRLVLTLSIGGVLLGGVLAWLIGHGIARPV
                     VGLCTAMGTLAGGDMTVAVPGVERGDEIGAMAKAVDIFKQHMLDGDRLRDEQESQKQA
                     AQAERRAALRSLADGFEGQVGGIIQTVGSATAQLQTASKLMQANAAQTSTEATSVATA
                     SAQSAANAQAVASASDQLTASISEIAKQVEGARTIAARADAEATQTTDLVQKLSQTVN
                     AIGAIVALINDVASQTNLLALNATIEAARAGEAGRGFAVVASEVKNLASQTARATEEI
                     ASKIGAVQAGTEDAAKAIASITRVMSQMSAVSASIAAAVEQQSSATAEIARNVEQSAS
                     GTQEVSMRIAKVDVAARETGTTANEINGSANELLAQTETLRTEVRRFLEQVRSDRENV
                     RLLSWDNAWNVGVASIDRHHRGFMDGLNSLFGHLMQGEGRDAVPHMAQLVGTTIEPHF
                     AEEETLMQRHGYPDLATHQAAHRAFVSRFREVSQTLESGRKIDAGGFFDFVAGWFKEH
                     MRDHDGPLARFLKLKQAA"
     gene            complement(4586..>6193)
                     /locus_tag="VHX39_09790"
     CDS             complement(4586..>6193)
                     /locus_tag="VHX39_09790"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3991448.1"
                     /translation="HQATALQAGIAAMVNGTMRETAEKVQTDAEAIKASGIADEQRDE
                     RTTLSAMDQTSALVLGMAIGGLVLGSGISWLIGRGISGPVTAMAAAMHQLAAGQLDQE
                     IPGLDRKDEIGRMAQAMLVFRQNAQEAHRLQGEAERVRVAKDRRQAAMDQNTQDFGTS
                     ASGVMATLVTEANAMRKTANDMTEAARRTRETAARTAENANNSAQNLGAVAAAAEEMS
                     ASIHEISEQVSRATQAAHTAVELASATDAKVGGMAAAVERVGTVVRLISDIAGQTNLL
                     ALNATIEAARAGEAGRGFAVVAGEVKALAAQTAKATEEISSQIGAIRGATGEAVTAVR
                     EVSAAIGQVNEVAAAIAAAVEEQSATTREIAASVQTVTAATREAGNDMDEVSSVSEAA
                     QASSQTVVKSADAVGGTADVLRSELTQFLEAMAKTDEADRRRYERVSGGGAEATLRAS
                     GRPDMRVIINDISRGGVSLQTDWTAPAGTEVQIVLPGVDTPVTARTARTRNGVLALAF
                     RQEEAMLRRVDMALAHIGTPTARAQAS"
BASE COUNT         1009 a         2051 c         1872 g         1261 t
ORIGIN      
        1 taaaccttac cctcacgcaa ccgttcgatc agttgatccg gtgtcaaatc gatcagctcg
       61 atttcgtcgg cccgctcgat gatcgcgtcg gggacagttt cgcggacccg gaccctggtg
      121 atccgggcaa cgatgtcgtt caggctttcc acgtgttgga tgttcaacgt ggtccagacg
      181 tcgatgccgg cggcaatcaa ttcctcgacg tccatccagc gtttgggatg gcgcgacccc
      241 tcggcgttgc tgtgcgcgag ttcgtcgacc agcgcgatcc cgggccggcg ttgcaacagc
      301 gcatcgagat ccatttcctc cagttcgcgt cccttatagg cgaccttgcg gcgtggcagg
      361 atttccagat cttcgcacaa ttgctttgtt tcgatccggc catgggtttc cacgatgccg
      421 gcgacgatat cgacgccgtc ggcgcgtttc ctgcgcgcat ccgaaagcat ctcataggtt
      481 ttgccgacgc cgggcgccgc acccagatag atcttcagct tgccacgcgt ttccgcctcc
      541 gcctgggcca gcagggcatc cggggacgga cgatttctga cagtgtcgct caagcgaccg
      601 ggccttcggt cagagtgacc ggtgcaccat acgaacggcg ccaccgggta gcggtcaacg
      661 gcgacgggcg acggttgtca ggcatcggag ttcctcacac cggccgaatg ggcgatagca
      721 cgatatcggt cactttcacg ccggcgaatg gtgcggtcgg cctgggctcg catgcaagcc
      781 ccggatttgc gcggctggat gtcatgcttg cgagataaag attcgagttg gtctgctgcc
      841 cggaagtatt aagatagtct taagataatg gtggaacagc acacgtcatt gatccaggtc
      901 aagccaatgc cggccacgct ccggtggcga ccggatgcca cgacacagcc agtttcagtt
      961 gacgtggatc aatgtggccg cagcggcagg ccgaacatac tcccgcatgt cgttacattg
     1021 gtccggatcg ccccggaccc aagggggatc ttgtcatgaa agacttcgca atcgaccgcc
     1081 gctttgtttt tgtgttccgg ctcctgatgg gatgggtgtt tctgtacgcc ggcctgtcac
     1141 aggtgctgtc gcacgacttc accaccacac agttcctgtc acataccaag acgtttcatg
     1201 agctttacga gccgctgacc tcgccggtga tcgctccata cctgacgttc ctggtgagtt
     1261 ggggccatct gctgatcggg ctgtcgctgg tgtccggttt gctggtccgc gtcagtggcc
     1321 cgtttggtgt ggcgttgatg ctgacctatt ggaccgcgca catggatttt ccctatatcg
     1381 aaagccatgt gaacctgctg gtcgactatc acatcgtcta cgccgtgctg atcacgtatc
     1441 tggtggttgc caatgccggc cacgctttcg ggctcgatgg ctggattgcc gaaaagttgg
     1501 ccgcgcagcg gacgatcggg ccgatgcggc cggtggcgag ctaaactttc cacatccaac
     1561 gcacgcgtcc ggaggatctc cgggcgcgcc gtccgtttat ccaggtagat caggctccgt
     1621 cgcgcgccag ataccggcgc cagggcgccc aataatgtgt ctcccagcca tcggtaacgc
     1681 ccaggtagtc gtggctggga acgtcgaggt ggatgagatc aatgcgaccg gccgcaccct
     1741 cgggcgtaaa tgtcaggatc agggtcgagt caggatcacc gtcgttgaaa tgcaccgacc
     1801 gccacgactg gatgatcaac ctgggctcca cgactgtcag catctgcccg ctgaggctgc
     1861 cttcgaaggc acgaaacggg gtgcctggtt gcgtatcgat cgcgaccggc gcgccggtga
     1921 tctccgcgtg gatgacggga tccaaataca tcgcgtagag cgactgggct ggcgccgcca
     1981 ggatgacaga ctgctggatg atgcttcgca tggcgagttt tccccatgtt caggcccctg
     2041 ggggtcacgc ccccaggggg caggccgccg cgggtcacgc agcctgcttc agcttcagga
     2101 accgggcaag cggaccatca tgatcgcgca tatgttcctt gaaccagcct gcgacgaagt
     2161 cgaagaaacc gccggcgtcg attttccgcc cagactcgag cgtctgcgag acctcacgga
     2221 accggctgac aaaagcccgg tgcgccgcct ggtgcgtcgc cagatcggga tatccgtgac
     2281 gctgcatcaa cgtctcctcc tcggcgaaat gcggttcgat cgtcgtcccg acaagctgcg
     2341 ccatgtgcgg cactgcatcg cgcccctcac cttgcatcag gtggccgaac agagagttca
     2401 gcccatccat gaacccgcga tgatgccggt cgatcgaggc aacgccaacg ttccacgcat
     2461 tgtcccagga caacaggcga acgttctccc gatcggatcg cacctgctcg agaaaccgcc
     2521 gcacctcggt ccgtaaggtc tccgtctgcg ccagcaactc attcgccgag ccgttgattt
     2581 cgttggccgt ggtgccggtt tcgcgcgcgg caacgtcgac tttggcgatc cgcatcgaca
     2641 cctcctgggt gcctgatgcg gactgctcga cattgcgggc gatttccgca gtggcggacg
     2701 attgctgctc cactgcggca gcgatcgacg cgctgaccgc actcatctgc gacatcacgc
     2761 gggtgatcga ggcgatggct ttcgcagcgt cctcggtccc ggcctgcacc gcgccgatct
     2821 tgctggcgat ctcctcggtc gcgcgggcgg tctggctggc cagattcttc acctcgctgg
     2881 cgaccacggc gaaccccctg cccgcctcac ccgcccgtgc cgcctcgatc gttgcattta
     2941 gcgccaacag gttggtctga ctcgcgacgt cgttgatcag cgccacaatc gcgccgatcg
     3001 cattgacggt ttgcgacagc ttctgcacca ggtcggtggt ctgcgtcgcc tccgcatcgg
     3061 cgcgcgccgc gatcgtccgc gccccctcaa cctgtttcgc gatctcactg attgaggcgg
     3121 tcagttggtc cgacgcactt gccacggcct gtgcatttgc agcggattgc gctgaagcgg
     3181 tggcaaccga ggtcgcttcg gtactggttt gcgcggcatt ggcctgcatg agcttcgatg
     3241 ccgtttgcaa ctgcgcggtg gccgagccga ccgtttggat aatgcctccg acctggccct
     3301 cgaacccatc ggcgaggctg cgcaacgccg cccggcgctc ggcctgcgcc gcttgctttt
     3361 ggctctcctg ttcgtcgcgc aaccggtccc cgtccagcat gtgttgcttg aaaatatcga
     3421 cggctttggc catggcaccg atttcatcgc cgcgttccac gccgggaacc gcgactgtca
     3481 tgtcgccacc ggcgagcgtg cccattgccg tacacaatcc aaccaccggc ctcgcgatac
     3541 cgtggcctat cagccaggca agcaccccgc cgagcaacac accgccaatc gaaagcgtca
     3601 acaccaaccg gcgcgtctgc tcgagggttg ccatcgtcag gcgttcttgc gcggcttcct
     3661 cggcaatacc gctgtctctg atcgcctcgg catcctgctg aatctgattg ccgctgctgc
     3721 gcatctcgcc atcgatgagc ctgctgacct cggtttgtcc ggccacgacc tggttcttcg
     3781 actgctgaaa atctgccagg cttgccaagg tcgtctggca ctttcccgcc agcggggtac
     3841 cctcggtgat atcgcaaatc tgccgcaggg tgtcggcagc ggcactgaac gacttatccg
     3901 caaccgacgc agcatcgccg ccgagacgtc cgatctgtcg cgccgaagcg acgcgggcca
     3961 gcaggacgag ccggtcgacc tgctggccca atacaacgac ctcggcgttg tccgccttcg
     4021 tcgcatcggc gatcaggtcg gccagagtgc gtgccaccgc ggtgccagcg gcggggagac
     4081 tgttggagtt cgccttcgcc gcgacctgcg ttgacgtcac cacccgatcg aagctgtgca
     4141 aatagacgtc ggtcagcgtg ccgatctctt caatcttcgc gtgccgctcg ggatttttga
     4201 tctcggtaag gccctggccc aacagtccac ggaggtgttc ggcttcggag cgtaccgccg
     4261 ccgctttcgc atccgccgcg gtgatcgcat actcgcgcgc gttacgccgg agttccagga
     4321 aactgcggtc aatctctcgg gcaatgccga ccacggtcac tcgttgtgtg taagtggcga
     4381 agccggccgc agcatcattg aaggcgaaat acgcggtggc gctggtgacg acaagaatcg
     4441 ccagcacgca caagaagccg aggttgacct tggtgttgat ctttcgatcc gtgagtagcg
     4501 aggaaagtcc gttgcgatcg ctcatgggca gcatcctggc gcgagaggcg ggttggctgt
     4561 cgtaggtcaa aggaacacgc acggcctagg acgcctgcgc gcgtgccgtg ggcgtgccaa
     4621 tgtgcgccag agccatgtcg acccggcgca gcattgcctc ctcctgccgg aacgccagcg
     4681 ccagcacacc gttgcgcgtt cgcgcggtgc gcgccgtcac cggggtgtcg actccgggaa
     4741 gcacgatctg tacttcagtt cctgccggag ccgtccaatc cgtctgcagc gacacgccgc
     4801 cccgcgagat gtcgttgata atgacacgca tatctgggcg acctgaggcc cgcagagttg
     4861 cctcggcgcc gccgccggag acccgctcat agcgacggcg atccgcctca tcggtcttcg
     4921 ccatcgcttc caggaactgc gtcagttcgg aacgcagcac atctgccgtg ccgccgacgg
     4981 cgtcggcgct tttcacaacg gtttggctgg atgcctgcgc cgcctcggaa accgaagaaa
     5041 cctcatccat gtcgttgccc gcctcgcgcg tcgccgcggt gactgtctgc acgctggcgg
     5101 cgatttcccg ggtcgtggcg gattgttcct cgaccgccgc cgcaatggct gctgcaacct
     5161 cattcacctg gccaatcgcg gcactgactt cgcgcaccgc agtcaccgcc tctccggtgg
     5221 caccgcggat cgctccgatc tggctggaga tctcctctgt cgccttcgcg gtctgcgctg
     5281 ccaacgcttt cacttcgccg gcaacaacgg caaacccgcg tcccgcttcg ccggcccgcg
     5341 ctgcctcgat cgttgcgttg agcgccagaa gattggtctg ccccgcgatg tcggaaatca
     5401 ggcggaccac ggtgccgacg cgctcaaccg ctgccgccat gccgccgact ttggcatcgg
     5461 tcgccgaggc caactccacc gccgtgtggg ccgcctgggt tgcgcgcgag acttgctcgc
     5521 tgatttcgtg gatcgaggcc gacatttctt cggccgctgc cgccactgcg cccagatttt
     5581 gcgcagagtt attggcgttc tccgcggtac gggcggcggt ctcacgggtt cgccgcgccg
     5641 cctccgtcat gtcgttcgcg gtctttcgca tcgcatttgc ctcggtcacc agggtcgcca
     5701 tcacgccaga cgccgaagtg ccgaaatcct gggtgttctg gtccatcgcg gcctggcggc
     5761 gatcctttgc cacccgcacc cgctccgcct caccttgcag cctgtgcgcc tcctgcgcgt
     5821 tctggcggaa caccagcatc gcctgggcca ttcggccaat ttcatccttg cggtcgagcc
     5881 cagggatttc ctggtccagt tgtccggctg ccagttgatg catcgcagcg gccatcgcgg
     5941 tgaccgggcc ggagatgcct cggccgatca gccaggagat gcccgagccc agtaccaacc
     6001 cgccgatcgc catgcccagt acgagcgcac tggtctgatc catggccgag agagtcgtcc
     6061 gctcgtcgcg ctgctcgtcg gcgatgccac tggccttaat tgcttcggca tcggtttgca
     6121 ccttttccgc cgtttcgcgc atcgtgccgt tgaccatggc ggcgatcccg gcttgcagtg
     6181 cggtggcctg gtg
//
LOCUS       DATAVD010000527         1679 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3587297, whole genome shotgun sequence.
ACCESSION   DATAVD010000527 DATAVD010000000
VERSION     DATAVD010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1679
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3587297"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..585)
                     /locus_tag="VHX39_09795"
     CDS             complement(43..585)
                     /locus_tag="VHX39_09795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Chromate resistance protein ChrB"
                     /protein_id="HEX3991449.1"
                     /translation="MVPWLLLTYKVPAEPAKKRIALWRRLKGMGAVYLQNGVCLLPKT
                     DIHVRGLKMIENDISEMAGESVILETAALNQAQETKVLARFKADRDEQYSEFIDKCED
                     FKAEVAKEVAANHFTYAELEENDVDLKKLRLWLAKIKQLDFYEANLAAEAQRLLSECE
                     AELDAYAQRVFDAHDENRSV"
     gene            814..>1679
                     /locus_tag="VHX39_09800"
     CDS             814..>1679
                     /locus_tag="VHX39_09800"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008851949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HEX3991450.1"
                     /translation="MRITMIGGGYVGLVSGACFAEFGTDVIVVEAEATKLAALRQGRM
                     PIYEPGLEKLVTENVAAGRLAFTGDLQAAVQNAEAVFIAVGTPTRRGDGHADLTYVYA
                     AVEQVARALTAPAVIVTKSTVPVGTGRRIKEIVAAVRPDLEIDVASNPEFLREGSAIV
                     DFMRPDRVVIGSETDRAREVLSQLYRPLNLIETPIVHTGIATAELTKYAGNAFLAMKV
                     TFINEMADLCEKVGADVHDVARGIGLDGRIGRKFLHPGPGYGGSCFPKDTLALVRTAQ
                     DHGAPSRLVEATV"
BASE COUNT          301 a          598 c          469 g          311 t
ORIGIN      
        1 cccggggtat cgcgcaatcc gggccgcgcc agtcatgctg cctcacaccg aacgattttc
       61 gtcatgggcg tcgaacacgc gttgcgcata ggcatcgagt tcagcctcgc attcgctcag
      121 caggcgctgc gcttcagccg cgagattggc ttcatagaag tccagttgct ttatcttcgc
      181 cagccacagg cgcaactttt tcagatcgac gtcgttttcc tcgagttccg cataagtgaa
      241 gtggttggcg gccacctcct tggcgacctc agccttgaaa tcctcgcact tgtcgatgaa
      301 ctcgctgtat tgctcgtccc ggtccgcctt gaaacgagcc agaaccttgg tttcctgcgc
      361 ctggttcagc gccgcggttt ccaggatgac cgactctccg gccatttcgg agatgtcgtt
      421 ttcgatcatt ttcagtccgc ggacatggat gtcggtcttc ggcagcagac agacgccgtt
      481 ctgcagatag accgcgccca ttcccttcag ccgccgccag agcgcgatac gctttttggc
      541 gggctcggcg ggaaccttgt aagtcaggag cagccacgga accatggctc cgatgtgatg
      601 caacgatggt tacatttcaa gtgaacggac cgcaaaaaac tgcgcgcccc accgcaatac
      661 cgaaaaccgc agcggcgccg caagacctga ccacccggcc ccacccattc ggcccgtccc
      721 gttcgccggg gtgggtcgac cgccaccaat tcctggcctc ccgccaccca cctgtgctct
      781 atcacccccg cacacccgca aaggattcgc ctcgtgcgca taacgatgat cggtggtggc
      841 tatgtcggcc tcgtctccgg cgcctgcttc gctgaattcg gcaccgacgt catcgtcgtc
      901 gaggcagagg caaccaaact cgccgccctc cgtcagggcc gcatgccgat ctacgaaccc
      961 ggcctggaaa agctggtgac cgaaaatgtc gcggccggcc gcctcgcctt caccggcgac
     1021 ctccaggccg ccgtgcaaaa cgccgaggcc gtgtttatcg ccgtcggcac gcccacccgt
     1081 cgcggcgatg gccacgccga cctgacctac gtctacgccg ccgtcgaaca ggtggcgcgt
     1141 gccctcaccg cccctgccgt gatcgtcacc aaatccaccg ttccggtcgg caccggccgc
     1201 cgcatcaagg agatcgtcgc cgcagtccgc cccgacctgg aaatcgacgt cgcctcgaac
     1261 ccggaattcc tgcgtgaagg cagcgccatc gtcgacttca tgcgccccga ccgcgtcgtc
     1321 atcggctcgg agaccgatcg cgcccgtgag gtgctgagcc agctctaccg tccgctcaac
     1381 ctgatcgaga ccccgatcgt ccacaccggc atcgcaaccg ccgagttgac caagtacgcc
     1441 ggcaatgcct tcctcgccat gaaggtcacc ttcatcaacg agatggccga cctgtgtgaa
     1501 aaagtcggcg ccgacgtgca tgacgtcgcc cgcggcatcg gcctcgacgg ccgcatcggt
     1561 cgcaagttcc tgcatccagg cccaggatat ggcgggtcat gctttccgaa ggacacgctg
     1621 gcgctggtgc gcaccgcgca ggatcatggc gcgccgtcac gcctggtcga ggccacggt
//
LOCUS       DATAVD010000528         2828 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1912026, whole genome shotgun sequence.
ACCESSION   DATAVD010000528 DATAVD010000000
VERSION     DATAVD010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2828
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1912026"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..970)
                     /locus_tag="VHX39_09805"
     CDS             complement(<1..970)
                     /locus_tag="VHX39_09805"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03860.1"
                     /note="This protein belongs to a clade of FMN-dependent
                     monooxygenases, within a broader family of
                     flavin-dependent oxidoreductases, the luciferase-like
                     monooxygenase (LMM) family, some of whose members use
                     coenzyme F420 rather than FMN; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NtaA/DmoA family FMN-dependent monooxygenase"
                     /protein_id="HEX3991451.1"
                     /translation="MREMVLVGFLQAQNCTTLASAWRHPDARSDFTSAAYYQKIGQVL
                     EEGKFQMGFFDDRLAMPDIYGGNPAEVVANGVRVVKIDPVATMMAMGLGTRFLGIGST
                     ASTTYYEPFDVARRFQTVDHLIGGRAAWNVVTSVNDGEAHNMGRDVHMDHDLRYDRAD
                     EFMEIVHSCWDGWEDDALVVDKTSGLFAHPEKVHRLEYEGKFLKSHGTFTVPRSPQGH
                     PVVIQAGSSPRGKVFAARWGETMFVGYPDFEAAQREYAAMKASIGALNRDPDKVTINT
                     IAYPVVAETRAEAEDKWALIDSLYKEVDGLSLLSEALNYDFRKKGMD"
     gene            complement(1019..1771)
                     /locus_tag="VHX39_09810"
     CDS             complement(1019..1771)
                     /locus_tag="VHX39_09810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3991452.1"
                     /translation="MDLQLRGKTALVTGASMGIGRAIAKALAAEGVRVVGAARRLDEM
                     ERMADEVEAAQHPRPVLVKQDVMEEGAAFRLRDAAYEAVGHIDILVNNAGGSRRLPVD
                     ASEDRWVEAMTLNFTRPRQLAHALLPKMIENRWGRIINITGKSEPDHLNAAFSAKAGI
                     HAWAKGLSIEVGQYGITVNSIPPGRIMSEQIRRNYPEDFRKTFAETEIPLKYWGEPED
                     LAVMAVWLASPLARYITGTVIPVDGGLRRYSF"
     gene            complement(1773..2540)
                     /locus_tag="VHX39_09815"
     CDS             complement(1773..2540)
                     /locus_tag="VHX39_09815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX3991453.1"
                     /translation="MEPVVKVTVQDYVATVMMDRPPVNAQSDQLRHELIAAFDSFTDR
                     DDVRVAMLTGFGRMFSAGADMKSRPTGDTAGEYWAFNRLVREMFNSISECAKPVIAAV
                     NGPALGAGFALAAACDIILASDNAVFGMPEIDIGLMGGAAMLQQLFGRSRARRMFYTG
                     WRVPADEMYRTGVIECSVPLEQLLPEAMKLAGEIASKSPLAMRYAKQSMNTTMHMPPR
                     DGYRFEQNMTVALSKSEDAAEARAAFFEKRKPDFKGR"
     gene            2618..>2828
                     /locus_tag="VHX39_09820"
     CDS             2618..>2828
                     /locus_tag="VHX39_09820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991454.1"
                     /translation="MRTTGIVLLLLCQIAVGARAQAPLDVGSPQAAFAGGPIRLSRHA
                     ANMLREHYQGDQVPLVPQPLRGRLDT"
BASE COUNT          520 a          897 c          833 g          578 t
ORIGIN      
        1 cgtccatgcc cttcttgcgg aagtcgtagt tgagtgcttc ggataacaag gacaggccat
       61 cgacttcctt gtacagcgaa tcgatcagtg cccatttgtc ctcggcctcg gcacgggttt
      121 ctgcgaccac cgggtaggcg atggtgttga tggtcacctt gtccgggtcc cggttaaggg
      181 cgccgatcga ggctttcatt gcagcgtact cgcgctgagc cgcctcaaag tcgggatagc
      241 cgacaaacat cgtttcaccc caacgtgcag cgaacacttt tccccgtggg ctggagccgg
      301 cctggatcac caccggatgg ccctgcggcg accgaggcac cgtgaatgtg ccatgcgact
      361 tcagaaactt tccttcgtac tccaggcggt ggactttttc ggggtgcgcg aacaggccgg
      421 atgtcttatc gacgaccagc gcatcatcct cccaaccgtc ccagcaactg tgcacgattt
      481 ccatgaactc gtcggcgcgg tcgtagcgca gatcgtgatc catgtgcacg tcgcggccca
      541 tgttatgcgc ctcaccgtcg ttgaccgagg tcacgacgtt ccaggccgcc cgcccaccga
      601 tcaaatggtc gaccgtttga aaccggcgag ccacgtcgaa tggttcgtaa taagtggtag
      661 acgccgtcga accgatcccg agaaaccgcg tacctaaacc cattgccatc atggtggcga
      721 cggggtcgat tttcacgacg cgcacgccat tcgcgacgac ttctgccggg ttgccgccat
      781 aaatgtccgg catcgccagg cggtcgtcga aaaaccccat ctggaatttg ccttcctcca
      841 gaacctggcc aattttctgg taataagcgg cggaggtaaa atcggagcga gcatcgggat
      901 gccgccacgc gctcgccaat gtcgtgcagt tctgcgcctg cagaaaaccg accaggacca
      961 tttctcgcat cgcgccgctc cgtccgtcat tgcggcacga gtctagggcc acgccaactc
     1021 agaaggaata gcgccgtaat ccgccgtcga ccggaatgac cgttccggtg atgtaacgcg
     1081 ccaatggtga ggcaagccag accgccatca ccgccagatc ttccggctca ccccagtatt
     1141 tcagtgggat ttccgtctcg gcgaacgtct tgcggaaatc ctccggatag ttgcggcgga
     1201 tttgctcgct catgatacgg ccgggcggga tggagttgac cgtgatcccg tattgcccca
     1261 cctcgatgga cagtcccttc gcccatgcgt ggatgccggc cttggcagag aaagcagcgt
     1321 tgaggtggtc aggctcgctt ttgccggtga tgttgatgat gcggccccag cggttttcga
     1381 tcatcttcgg caacaaagca tgggccagtt ggcgcggccg ggtgaagttc aaggtcatcg
     1441 cctcgaccca acgatcttcg ctggcgtcga ccggcagacg gcggctgccg ccggcgttgt
     1501 tcaccagaat atcgatgtga ccgaccgctt cataggcggc atcgcgtagc ctgaaagcgg
     1561 cgccttcctc catgacatcc tgtttcacca ggactggtct gggatgttgc gctgcctcga
     1621 cctcatcggc catgcgttcc atttcatcca accgacgagc agcgccaacg acgcgcaccc
     1681 cctcggcggc gagcgccttg gcaatggcac ggccgatgcc catgctggca ccggtcacga
     1741 gcgcggtctt gccgcgaagt tgcaggtcca tcttagcgtc ccttaaaatc cggcttgcgc
     1801 ttttcgaaga atgcggcgcg cgcctcggcc gcatcttcgg acttcgacag agccacggtc
     1861 atgttttgct cgaaccggta gccgtcgcgt ggcggcatat gcatggtggt gttcatcgat
     1921 tgtttcgcat aacgcatggc cagcggactt ttcgaagcga tctcacccgc caacttcatc
     1981 gcctccggca gcagttgctc cagcggtacg ctgcattcga tgacgccggt gcggtacatt
     2041 tcatccgccg gcacgcgcca accggtataa aacatgcgcc gtgcccgcga gcggccgaac
     2101 aattgctgca acatcgccgc cccacccatc agcccgatgt cgatttccgg catgccgaat
     2161 actgcgttgt ccgacgccag gatgatgtcg cacgcggcag ccagagcgaa ccctgcaccg
     2221 agcgccggac cattcaccgc ggcaatcacc ggtttggcgc attcgctgat cgaattgaac
     2281 atctcccgga ccagccggtt gaaagcccag tactcgccgg cggtatctcc ggtgggtcgg
     2341 gatttcatgt cagcgccggc cgagaacatc ctgccgaacc cggtcagcat ggcgacacgc
     2401 acatcgtccc gatcagtaaa actgtcgaac gcggcaatca gttcgtgacg cagttggtcg
     2461 ctctgtgcgt ttaccggcgg ccggtccatc atcacggtgg cgacgtagtc ttgcacggtg
     2521 accttgacga caggctccac gacgtgtcct ccgcttggtt gtcgcgccgg ctgtgccata
     2581 ggtttgccga cgggtccagg atgcgtgagg agaccggatg cggacgacgg gtattgtgct
     2641 tctgctgcta tgccagattg ctgttggcgc acgggcgcag gcgccgctcg acgtcggctc
     2701 gccgcaggct gcgtttgccg gtgggccaat ccggctgtcc cggcatgcag caaatatgct
     2761 gcgtgagcac taccagggtg accaggtccc gctggtccca cagccgttac ggggtcggct
     2821 cgatacgg
//
LOCUS       DATAVD010000529         4019 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3400214, whole genome shotgun sequence.
ACCESSION   DATAVD010000529 DATAVD010000000
VERSION     DATAVD010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4019
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3400214"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(38..616)
                     /locus_tag="VHX39_09825"
     CDS             complement(38..616)
                     /locus_tag="VHX39_09825"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3991455.1"
                     /translation="MLPAWLRGDGYTVTTCRFLTAIGYSAHGWKPGVNIGPTRRLLDG
                     AVHRLIELSDANGAVSLLGFSMGGLFARWLALRMPERVRQVVTVCSPVQQPAKNFWLP
                     VEPLLRRWPGVDLADLAGEIIRPLPVPGTFLFSRDDGIVNCAACRDPASVEDNIEIGG
                     SHVLIARSPEVMAIVAQRLARQLAHSTVGGGV"
     gene            complement(808..3186)
                     /locus_tag="VHX39_09830"
     CDS             complement(808..3186)
                     /locus_tag="VHX39_09830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEX3991456.1"
                     /translation="MAPLIGLVLACAGIALLIALGTYDAHDPSLNTAGTSATRNMVGP
                     LGAIVSDLMLQSFGFTAVLPGLTLLVWAWRLVSHRGMGSVAVRLASLLGAIPVAAAVF
                     ASLSSDGGVAWPTTAGPGGASGLLLADAVLGASGRLAGPAGVVMVWLLGVGLSGALVA
                     LALGLTVSEWQTAGRAARRAARATARGSRSGWRWMGFGLPIPKLAALLDWSMALVRPA
                     PDHGEPPDIAPDFHPDYEPFSPEPAHVSAAGRVLEPYSSPPRAQPPKARPSPRPMGGV
                     SAQQGSLALPEQGWRFPPLNLLHPPPPRSDAGPTREALEGNARLLIKVLGDYGVKGTI
                     VDFRPGPVVTLYELEPEAGIRSARVIGLADDVARSLSVTAVRIATVPGRNVIGIEVPN
                     AKRDTVYLSEILSSEEVRKHAGRLPIALGKNIGGQAVVSDLTRMPHLMIAGTTGSGKS
                     VGVNAMILSLLYRLSPDQCRMILIDPKMLELSIYDGIPHLMAPVVTEPAKAVTALKWV
                     VREMERRYRAMSQLSVRNIGGYNERVEDARRKGEVLTRRVQTGFDSETGKPTFEEQPL
                     TLESLPFIVVVVDEMADLMMVAGKEIEAAVQRLAQMARAAGIHVIMATQRPSVDVITG
                     TIKANFPTRISFQVISKFDSRTILGEQGAEQLLGMGDMLFMQGGGRVTRVHGPFVSDE
                     EVERVVAFLRDQAEPVYVNDVTEPVDKDEEPLLSGISSASDGEKGLFDQAVDLVAREG
                     KATTSFIQRHLNIGYNRAAKLIEQMEKEGMVGPANHVGKREILLRRTNHDDD"
     gene            3353..>4019
                     /locus_tag="VHX39_09835"
     CDS             3353..>4019
                     /locus_tag="VHX39_09835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX3991457.1"
                     /translation="MTARGLGLSWLVFCYAFLYLPIAFLIAFSFNESRSVTAWGGFSW
                     HWYWVLGHDSAMLGAAWLSLRIAAVSASVALVVGTASGLALARFGRFGGRAAFEAALF
                     APLILPEVISGISLLLLFVLLERLTGWPSGRGAGTVTIAHASVSVAYVAVVVRARLAD
                     MGTALEEAAADLYAPPWKVFVSVTVPVLAPALVAGWLLGFTLSLDDVVVASFTSGPGA
                     TTLP"
BASE COUNT          669 a         1274 c         1338 g          738 t
ORIGIN      
        1 gtccttcaaa caaaccagta ttgttgcctt ggtgcgctca gacgccaccg ccgaccgttg
       61 aatgggccaa ttgccgcgcc agcctttgtg ccacgattgc catcacctct gggctgcgcg
      121 cgatcagcac gtgcgagccg ccgatttcga tgttgtcctc gacagaagcc gggtcccgac
      181 aggccgcaca attcactatg ccatcatcac ggctgaacaa aaacgttccc ggcaccggca
      241 atggcctgat aatttccccc gccaggtcgg ccaaatcgac tcccggccac cggcggagca
      301 acggttccac cggcaaccag aaattcttcg ccggttgctg aacaggactg cagactgtaa
      361 cgacctggcg gacgcgctcc ggcatgcgca aagcgagcca cctggcgaac agcccgccca
      421 tgctgaaacc gaggagactg accgcaccgt tcgcatcgga cagttcgata agccgatgca
      481 cagcgccatc gagcagccgg cgtgtcggac caatattgac gcccggtttc cagccatgcg
      541 cggaatagcc gatagcggtc aggaaccggc acgtggttac cgtgtagccg tcgccgcgaa
      601 gccacgccgg caacattgac acggcatggc cgtcgcctct gggcgcttct cgggcgactg
      661 catctaccgg tggtttggcc ctttgtcccg tatttgcgac aaacttcttg atgaccggta
      721 tccgtgaacg attttcatgc catcgaggtg ccagcccgcg gactggctga ctgcgttccg
      781 acttacttcg cttccgtcgc cgctcactca atcatcgtcg tgattggtcc ggcgcagtaa
      841 tatctcgcgt ttgcccacat ggttcgctgg gccgaccatg ccttccttct ccatctgctc
      901 gatcagtttg gcggcgcggt tatagccgat gttcagatgc cgctggatga atgacgtggt
      961 ggctttgcct tcgcgggcca ccagatcgac ggcctgatcg aacaggccct tctcgccatc
     1021 actggcggac gagatgccgg acagcagcgg ctcctcgtcc ttgtcgaccg gttcggtcac
     1081 gtcgttgaca tagaccggct cggcctggtc gcgcaggaag gcgaccacac gctcgacttc
     1141 ctcatccgaa acgaacgggc cgtgcacgcg ggtgacccgg ccgccacctt gcatgaacaa
     1201 catgtcgccc atgcctaaca actgctcggc gccttgctcg cccaggatgg tgcgggaatc
     1261 aaatttggaa atgacctgaa acgagatgcg cgtcgggaaa ttggccttga tcgtgccggt
     1321 gatgacgtcg accgagggcc gctgcgtggc catgatcaca tgaatgcccg cagcccgcgc
     1381 catctgggcc agacgttgca cggcggcctc gatctccttg ccggcgacca tcatcaggtc
     1441 ggccatttcg tcgaccacga cgacgatgaa gggcagggat tcaagcgtca gcggctgctc
     1501 ctcgaaagtg ggcttgccgg tttcgctgtc aaagcctgtc tgcacgcggc gggtcaggac
     1561 ctcgcccttg cggcgcgcat cctcgacgcg ttcgttgtag ccgccaatgt tgcgtacgct
     1621 gagctggctc atcgcccggt agcgccgttc catttcgcgc acgacccact tcaatgccgt
     1681 cactgccttg gcgggttcgg tgacgaccgg ggccatcaga tgcgggatgc cgtcatagat
     1741 ggacagttcc agcatcttgg gatcgatcag gatcatgcgg cactgatccg gcgataaccg
     1801 gtacagcagc gacaggatca tcgcattgac gccgaccgac ttgccggaac cggtggtgcc
     1861 ggcaatcatc aaatgcggca tccgcgtcag gtcggatacc acggcctggc cgccgatgtt
     1921 tttgcccagt gcgatcggca gacggccggc gtgtttgcga acttcttcgc tggaaagaat
     1981 ttcgctcaag tacacggtgt cgcgtttggc gttcggtacc tcgatgccga tcacgttacg
     2041 gcccggcacg gtcgcgatgc ggactgcggt gaccgacagg ctgcgcgcca cgtcgtcggc
     2101 gaggccgatg acccgggcac tgcggatccc ggcctccggc tccagttcgt acagcgtcac
     2161 gaccgggccg ggccggaagt cgacgatggt gcctttgacg ccgtaatcgc ccaacacttt
     2221 gatcagcaat cgggcgttgc cctccagcgc ctctcgcgtc ggtccggcat cggaccgcgg
     2281 cggcggcggg tggagcaggt tcagcggcgg aaaccgccag ccttgctcag gcaacgccag
     2341 gctgccttgc tgggcgctga cgccccccat cggcctgggg ctgggacgcg ctttaggcgg
     2401 ctgcgcgcgc ggcgggctgg aatagggctc caatacgcgt cccgccgcac tgacatgggc
     2461 cggctctggg ctgaacggtt cgtagtccgg gtggaaatcc ggcgcgatat ccggtggctc
     2521 gccgtgatcg ggcgctggcc ggaccagcgc catactccag tcgagcaggg cagccagctt
     2581 ggggatcggt aggccaaacc ccatccagcg ccaacccgag cggctgccgc gagcggtcgc
     2641 gcgtgcggcc cgtcgcgcgg cgcggccggc ggtctgccac tccgacacgg tcaacccaag
     2701 cgccaaagcg accagcgcac cggagaggcc gacgcccaga agccacacca ttaccacccc
     2761 tgcgggaccg gcaaggcggc cgctggcgcc gagcactgcg tcggcaagta acagcccgga
     2821 ggctccacca ggtcccgccg tggtcggcca ggccacgccg ccatcagaag agagcgaggc
     2881 gaacaccgca gcggcgaccg gtatggcgcc aagcaatgac gccaaccgga cggcgaccga
     2941 gcccataccg cgatgcgaga ccaggcgcca ggcccagacg agcaaggtca ggccaggcag
     3001 gacggcggtg aaaccgaagc tctgcagcat cagatcggaa acgatggcgc ccagggggcc
     3061 gaccatgttc cgggtggcgc tggtccccgc agtgttcagc gacgggtcgt gcgcgtcgta
     3121 ggtgcccaga gcgatcagca gcgcgatgcc ggcgcaggcc agcaccagac cgatcagcgg
     3181 ggccatatga cggagaagcg gcgacggtcc gcggatgcgg ctcgggcctg aggatcggct
     3241 ggccgtggcc cgccctggca ttgccatctg tcacctggtg gtcttgggtt acgccccttt
     3301 ataccggtcc gggctcggat tcccaacggt gttgcaaagc ggggagggcg ggatgacggc
     3361 acgcggcctc gggctgtcct ggctggtgtt ctgttacgcg tttctttacc tgccgatcgc
     3421 attcctgatc gcgttcagtt tcaacgaatc ccgctcggtc accgcctggg gtgggttttc
     3481 ctggcactgg tattgggtgc tggggcacga ctcggcgatg ctcggggcag catggctgtc
     3541 gctgcggatc gcggcagtct cggcgtctgt tgcgctggtg gtggggacgg catcggggct
     3601 ggcgctggcc aggttcggcc ggttcggtgg gcgggcggcg ttcgaggcag cgttgttcgc
     3661 tccgttgatc ctgccggagg tgatatccgg aatttcgctg ctgctgctgt tcgtgctgct
     3721 ggagcgcctg acgggatggc cgtcggggcg aggggcgggg acggtgacca tcgcccatgc
     3781 ctcggtttca gtggcgtacg tggcggtggt ggtgcgggct cggctggcgg atatggggac
     3841 ggcgctggaa gaggctgcgg cggatttata cgcgccgccg tggaaggttt ttgtcagtgt
     3901 gacggtgccg gttttggcgc cggcgctggt ggcgggatgg ctgcttgggt ttactctgtc
     3961 gctggatgat gtggtggtgg cgagttttac gtcaggccca ggggcgacga cactgccga
//
LOCUS       DATAVD010000530         5654 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3213439, whole genome shotgun sequence.
ACCESSION   DATAVD010000530 DATAVD010000000
VERSION     DATAVD010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5654
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3213439"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(200..754)
                     /locus_tag="VHX39_09840"
     CDS             complement(200..754)
                     /locus_tag="VHX39_09840"
                     /inference="COORDINATES: protein motif:HMM:TIGR03865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent catabolism-associated CXXCW motif
                     protein"
                     /protein_id="HEX3991458.1"
                     /translation="MTAARAIMAGLLLLGLASSASAATPPPEPPAYRTSNYRAQVPAT
                     VDGKPALTTAQAAKLWRDHAAIFIDTLPQPPKPATLPAGTIWHRKTRDDIPGSIWLPD
                     TGYGQLPSIMETWFETNLRQATAGDQNRPLVFYCLANCWMSWNAAKRAMALGYTHADW
                     YAGGTDEWEAHHLPLEPREPQPRP"
     gene            complement(751..1497)
                     /locus_tag="VHX39_09845"
     CDS             complement(751..1497)
                     /locus_tag="VHX39_09845"
                     /inference="COORDINATES: protein motif:HMM:TIGR03871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX3991459.1"
                     /translation="MELVDPKVLRVCADPRSMPFSDEAHQGFEDKLAELFAQKLGKTL
                     SYTYYPRAIGFVRNTLNALKCDVVMGDAQGDDMVQTTNPYYHAYYALVVPAGAGLDDV
                     KSLEDPRLKGKHIGVIAGTPPATIMADNGLIGDARPFPLMVDTRVDAPSKMMIDQIVS
                     GSLDAGVVWGPIGGYYAKNATKPLIVIPLIHEHGAPMDFRISMGVRRSDQDWKRTLNR
                     LISENQGAINKILIGYGVPIVDEEGKAITQ"
     gene            complement(1626..2144)
                     /locus_tag="VHX39_09850"
     CDS             complement(1626..2144)
                     /locus_tag="VHX39_09850"
                     /inference="COORDINATES: protein motif:HMM:TIGR03874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome, methanol metabolism-related"
                     /protein_id="HEX3991460.1"
                     /translation="MTIHARTLVIASMLLCLSTTFVRADKPGNPAAVTSQDGKYADKD
                     GNPTYKVDKDGKVDFYSYVGFVRYSANCLQCHGPDGLGSTYAPSLVDALKSMDYGTFL
                     ATVAGGKKDVSASQQLVMPSLGMNKNVMCYVDAIYVYLRARSTGAIGRGRPAAHEPKP
                     AAFTTAEDSCMG"
     gene            complement(2238..3974)
                     /gene="xoxF5"
                     /locus_tag="VHX39_09855"
     CDS             complement(2238..3974)
                     /gene="xoxF5"
                     /locus_tag="VHX39_09855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lanthanide-dependent methanol dehydrogenase
                     XoxF5"
                     /protein_id="HEX3991461.1"
                     /translation="MAQTAASAAGKDWTTPAGTMSGQRFSSLNQITAKNVGKLQVAWT
                     FSTGVLRGHEGQPLVIGNVMYLNAPFPNTVFALDLDHDGKILWKYEPKQDPNVIPVMC
                     CDTVNRGVAYGDGKIFLHQADTTLVALDAKTGKVVWSVKTDDPSKGATGTDAPLVVKD
                     KVYVGVSGGEFGVRGWFAAYDVKDGKQVWRGWSMGPDSDTLIVPGKTTDLGKPIPANS
                     SEASWKGDEWKIGGGDTWGWKSYDPKTNLIFYGSGNPSTWNPKQRPGDNKYSMTIWAR
                     DADTGAVKWLYQMTPHDQWDYDGVNEMVLVDQKIDGKERHLLVHFDRNGFGYTLDRDT
                     GALLVAKKYDPAVNWASKIDMDPKSADYGRPEVLPQYSTEHGGEDVNTTNICPAALGT
                     KDEQPSAFSPQTGLFYVPTNHVCMDYEPFRVSYTAGQPYVGATLSMYPPKGDTNMGNF
                     IAWDATKGKIVWSDPEQFSAWGGALATAGNVVFYGTLEGYLKAVDAKTGKLLYKFKTP
                     SGIIGNVMTYEHAGRQYVAVLSGVGGWAGIGLAAGLTDPHAGLGAVGGYASLNQYTSL
                     GGSLTVFALPKQ"
     gene            4440..5465
                     /locus_tag="VHX39_09860"
     CDS             4440..5465
                     /locus_tag="VHX39_09860"
                     /inference="COORDINATES: protein motif:HMM:TIGR04559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinoprotein relay system zinc metallohydrolase
                     2"
                     /protein_id="HEX3991462.1"
                     /translation="MATYDRRADRLSVMDLGSWIGEGMTVRGTFAVAAWVFVVMGLAG
                     ATLAGKPAVDVPAFSIQKVADGDYAHFGQVAMTSAANAGDIANLGIVVGRDAVAVIDT
                     GGSVAVGEALRAAVAKLTGKPVRYVINTHEHPDHIFGNAAFAGSGAIFVGHQNLPESM
                     RAHGPFYLHSFRDVLGAAAIAKVRLIPPTLLVKDTMTLDLGDRRLLLTAWYPPAHTDC
                     DLTVLDERTHTLFSGDLVFLDHIPVIDGSLKGWLDVLPRLAMLPAERVVPGHGRRVGA
                     WPGALDDERRYLLAVEADARKYIALGTPMAQAVPLIGQSERGRWRLFDDYNPRNATAA
                     FSELEWE"
BASE COUNT          961 a         1609 c         1929 g         1155 t
ORIGIN      
        1 gctcgtaaaa ggcgtggata ccggcatgcg ccggtatgat ggacggggtc aaccgaagag
       61 tctgcatcaa cgccggctgg tatgagtcgc tgatccgcca atgaacgcgc gtccaattca
      121 tctcgctaat ccgccttaag aaacgcctgc gtccgcgacg acagatgacg ggcttgggcc
      181 agattgggtg accgaagcct tacggccgtg gttgcggctc gcgtggttcc agcggcaggt
      241 ggtgggcttc ccattcgtcg gtgccgccgg cgtaccagtc ggcatgggtg tagccgagcg
      301 ccatggctcg cttcgcggcg ttccaggaca tccagcaatt ggcgaggcag tagaagacca
      361 gagggcggtt ttggtcgccc gcggtggctt gccgcaggtt ggtttcgaac caggtttcca
      421 tgatcgatgg caattgcccg tagccggtgt ccggcagcca gatgctgccg gggatatcgt
      481 cgcgagtctt gcggtgccag atcgttccgg ccgggagggt ggcgggtttg gggggctgcg
      541 gcagggtgtc gatgaagatg gcggcgtgat cgcgccagag ttttgccgct tgcgccgtgg
      601 tcagggcggg cttgccgtcg acggtggctg gaacttgtgc ccgatagttg ctggtgcggt
      661 acgctggggg ttcgggcggt ggagtcgcgg cgcttgccga cgacgccagg cccagcagca
      721 acagtcccgc catgatggcg cgcgcggcgg tcactgggtg atcgccttgc cctcctcatc
      781 gacgatcgga acgccgtagc cgatgaggat cttgttgatc gcaccttggt tttcgctgat
      841 caggcgattg agggtgcgct tccagtcctg gtcgctgcgg cgcacgccca tggagatgcg
      901 gaaatccatc ggcgcgccgt gctcgtggat cagcgggatg acgatcagcg gcttcgttgc
      961 gttcttggca tagtagccgc cgatcgggcc ccagacgact ccggcgtcca gcgatcccga
     1021 aacgatctgg tcgatcatca tcttggaggg tgcgtccacg cgggtgtcga ccatcagcgg
     1081 gaagggtctt gcatcgccga tcaggccgtt gtcggccatg atcgttgcgg gcggtgtgcc
     1141 ggcaatcacg ccgatatgct tgcctttcag cctcgggtcc tccagcgact tgacgtcgtc
     1201 gagaccggcg ccggccggca ccaccagcgc gtagtaggcg tggtagtacg ggttggtggt
     1261 ctgcaccatg tcgtcgcctt gtgcgtcccc catgacgacg tcgcatttca gggcgttcaa
     1321 ggtgttgcgc acgaagccga tcgcgcgcgg gtagtaggtg taggacaggg tttttccgag
     1381 tttctgggcg aacagttcgg ccagcttgtc ctcgaagcct tggtgcgcct catcggagaa
     1441 cggcatgctg cggggatcgg cgcagactcg tagcactttc ggatcgacca gttccaccga
     1501 tccgcccaga cctggcgcct gggcgtgcgc ccgcaccgcc agcaggccga ggcaacacag
     1561 tgccagcgcg agttggcggc cgttacggat gatacggttc atcgcgtgat gctgaaggaa
     1621 ggttttcatc ccatgcaact atcttcggcg gtggtgaacg cggcgggttt cggttcgtgt
     1681 gccgcggggc ggcctcggcc gatggcgccg gtggagcggg cgcgcaagta gacgtagatc
     1741 gcatcgacat agcacatgac gttcttgttc atgccgagcg acggcatgac gagctgctgg
     1801 gaggctgaca catccttttt gccgccggcg acggtggcga ggaaggtgcc gtagtccatg
     1861 cttttcaggg catcgacaag tgacggcgcg taggtggacc cgagaccgtc gggaccgtgg
     1921 cactgcaggc agttcgccga atagcggaca aagccgacat agctgtagaa atcgactttg
     1981 ccgtccttgt ccaccttgta ggtggggtta ccgtccttgt cggcgtattt gccgtcctgc
     2041 gaggttaccg cggccgggtt tcccggttta tccgcacgca cgaaagtggt ggacaggcac
     2101 agcaacatcg aggcgataac gagggttcgt gcgtgtatcg tcactctgaa catccttggt
     2161 ggtcgtgcaa aaaagtgagc cggcgcccgg ttcatcgccg cggcgccggc cctgttgaac
     2221 aacaatccag acagacttta ttgtttcggc agtgcgaaga cggtcaacga gccaccgagc
     2281 gaggtgtact ggttgagaga agcgtaaccg ccgaccgcgc cgagacccgc atgcggatcc
     2341 gtcaggcccg cggcgagacc gattccggcc cagccgccga caccggacag gacggccaca
     2401 tattggcgcc cggcgtgttc ataggtcatc acgttgccga taatgccaga cggggtcttg
     2461 aacttataca gcagcttgcc cgtcttggcg tccaccgcct tcaggtatcc ctccagcgtg
     2521 ccgtagaaca cgacattgcc ggcggtggcg agggcgccgc cccatgccga gaactgttcc
     2581 ggatcagacc agacgatctt acccttcgtt gcgtcccagg cgatgaagtt gcccatgttg
     2641 gtatcgccct tcggcggata catggacagg gtggcgccga catagggctg gcccgcggtg
     2701 taggaaacgc ggaacggctc gtagtccatg cagacatggt ttgtgggcac gtagaacagc
     2761 ccggtctgcg gcgagaaggc ggagggttgc tcatccttcg tgcccagtgc ggcggggcag
     2821 atgttggtgg tgttgacgtc ttcaccgcca tgttcggtgg agtattgcgg aaggacttcc
     2881 ggccggccgt agtcggcgct tttcggatcc atgtcgatct tggaggccca gttcaccgcc
     2941 ggatcgtatt tcttcgcgac cagcaatgcg cctgtgtcac gatcgagtgt gtagccgaag
     3001 ccgttacgat cgaagtgcac caggaggtga cgttccttgc cgtcgatctt ctggtcgaca
     3061 agcaccatct cgttgacgcc atcatagtcc cactggtcgt gcggggtcat ctgatagagc
     3121 cacttgaccg cgccggtgtc ggcatcgcgc gcccagatgg tcatcgagta tttgttgtcg
     3181 ccgggacgct gcttggggtt ccaggtggac gggttgccgg aaccgtagaa gatgaggttg
     3241 gttttcgggt cgtacgactt ccatccccag gtatcgccgc cgccgatctt ccactcatcg
     3301 cctttccagc ttgcttcgct ggaatttgcg ggaatcggtt tgcccagatc ggtcgtcttg
     3361 ccggggacga tcagggtgtc gctgtccggg cccatcgacc agccgcgcca gacctgcttg
     3421 ccgtccttca cgtcgtaggc cgcgaaccag ccgcgcacgc cgaattcacc gcccgacacg
     3481 ccgacataga ccttgtcctt gacgacgagg ggcgcatcgg tgccggtggc gcccttggag
     3541 ggatcgtcgg tcttgaccga ccagacgacc ttgccggtct tggcgtcgag ggcgaccagt
     3601 gtggtgtcgg cctgatgcag gaagatcttg ccatcgccgt aggcgacgcc gcggttgacg
     3661 gtatcgcagc acatcaccgg aatgacgttg ggatcttgtt tcggttcata cttccacagg
     3721 atcttgccgt cgtgatcgag gtcgagggcg aagacggtgt tggggaacgg tgcattcaga
     3781 tacatcacgt tgccgatgac aaggggctgg ccttcgtgcc cacgcagcac cccggtcgag
     3841 aaggtccatg cgacctggag ttttccgacg ttcttggcag tgatctgatt caggctggag
     3901 aagcgctggc cgctcatggt tccggctggt gtggtccagt ccttgcccgc tgccgatgcc
     3961 gcggtctgtg ccatggacgt tgacgccatc aggacagatg acagaaccgc ccctgccatc
     4021 agcaatccgt gacgcgatat tattctcatt cattttcccc ttcgccattt gacgaccaat
     4081 ggacgaggcc aggggttgcc tgccacgcca accggcgatc ctaccaggaa gagactgccg
     4141 acagcgtgtc acgacagcgc ttgcgaggag gccggggacg cccggcatgt ttgctccacc
     4201 acgcactgtc ttcgaggttt acctgtcctc ccgatttaca ggtagcctag aagtcggttg
     4261 caaaaaccat aaagccgtcc tggcgggaca gcaactggtt tattcgggaa agccgggtga
     4321 tttaatcggg aaagccgtgc tacggcgccg ggcaagattg cgtgagaaat gatgcagtgc
     4381 atcatgactg atcgaactcg gaacgaatgg tgcgtccgca tgatttcgtt gaatcgtcga
     4441 tggcgacata tgatcgccgc gccgatcgat tgtcggtcat ggatctgggg tcatggatcg
     4501 gggaaggtat gaccgtgcgg ggaacgttcg cagttgcagc atgggttttt gtcgtgatgg
     4561 gtcttgccgg ggcgaccctg gcgggaaagc cggcggtcga tgtgccggct ttctcgatcc
     4621 agaaggtcgc ggacggcgac tatgcgcatt tcggacaggt cgccatgact tcggcggcga
     4681 atgccggcga tatcgccaat ctggggatcg tggtcggacg cgatgccgtg gcggtgatcg
     4741 ataccggcgg cagtgtcgcg gtgggcgagg cgctgcgggc ggcggtggca aagctgaccg
     4801 gcaagccggt gcgctatgtc atcaacacgc acgagcatcc ggatcatatc ttcggcaatg
     4861 cagccttcgc cgggtcggga gcgatttttg tcgggcacca gaatctgccg gaatcgatgc
     4921 gggcgcatgg tccgttctac ctgcattcgt tccgcgacgt gctgggtgcg gccgcgatcg
     4981 ccaaggtacg gctgatcccg ccgaccttgc tggtgaagga cacgatgacg ctcgatcttg
     5041 gcgaccggcg gttgctgctg acggcctggt atccgccggc gcacaccgat tgcgacctga
     5101 ccgtgctgga tgaacggacg cataccctgt tctcgggcga cctggtgttt ctggatcaca
     5161 ttccggtcat cgacggcagc ctgaagggct ggctggatgt gctgccgcga ctcgcgatgc
     5221 tgccggccga acgggtggtg ccggggcatg ggcgccgggt cggggcgtgg ccgggggcgc
     5281 tggacgacga gcggcgctat ctgctggcgg tggaggcgga tgcgcgcaag tatatcgccc
     5341 tgggcacgcc gatggcgcag gcggttccgc tgatcggcca atcggaacgg gggcgctggc
     5401 ggttgttcga tgactataat ccgcgcaatg ccacggcggc gttcagcgaa ttggaatggg
     5461 agtgaccgcc ggcaggactg tcgcgacagt acaacatata ctatacggca agaacgagcg
     5521 ggcaggaggc gatatgcgga tgatcgaacg aaccgccgcg ttgatgcagc gggcgctgat
     5581 tggaagacgg tttgttcttg gcggtttgcc gggggcgttg ctgctggcgc cgcgtgcgcg
     5641 cgccggggcg ccgg
//
LOCUS       DATAVD010000531         2542 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2655765, whole genome shotgun sequence.
ACCESSION   DATAVD010000531 DATAVD010000000
VERSION     DATAVD010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2655765"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(181..1005)
                     /locus_tag="VHX39_09865"
     CDS             complement(181..1005)
                     /locus_tag="VHX39_09865"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3991463.1"
                     /translation="MKVSTMIRPDPTVQPHDRLLARMADYARRIEASGFPGIWVGDSL
                     GRGRATLDPLIELSVVAAVTERVEIGISVLQLPLRNPIELAHRVQSVQALSGNRLQLG
                     VGSGSTRADFELLGYDYDHRFGIMKRSLETMRRAWRGEAVNSGGTLSVWPGCEGGPPI
                     LMGAWRSPRWITFAAQECQGWTPSGRYSSWEDLELGMKIYRDAGGTNAVLANVAVDLG
                     DRPESAGLKEVTTSLACPPDEARRRLKRIEQIGFDEVLLVSHSSVLEDIERVRDFL"
     gene            complement(1111..1416)
                     /gene="clpS"
                     /locus_tag="VHX39_09870"
     CDS             complement(1111..1416)
                     /gene="clpS"
                     /locus_tag="VHX39_09870"
                     /inference="COORDINATES: protein motif:HMM:NF009564.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HEX3991464.1"
                     /translation="MPDITTDSDDKTDLKTERPRLHKVILINDDFTPREFVVMVLKAE
                     FHMGEEQAQRVMVTAHRRGSCVVAVYTKDIAESKATNATDAGRRKGYPLLFTTEPEE"
     gene            complement(1422..>2542)
                     /locus_tag="VHX39_09875"
     CDS             complement(1422..>2542)
                     /locus_tag="VHX39_09875"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HEX3991465.1"
                     /translation="AVDVGHAVLSRHESVTVAENVQYAWPHVSGRYLYVASSNSASGL
                     GPVGNSHQVTAFSVHPESGMLTPHGDPIPLPTRPIHMATDIASRHILVAFSNPGAFRV
                     YRINADATLGHEVKPPEPIDPGIYPHQVRATPDDKHVILVTRGHSATKTKPEEPGALK
                     IFNYADGQLSHEVSIAPNDGYGFGPRHLDFHPTRPWVYVSLERQNALAMFATQNGTPS
                     ATASFTKPTLAAPAHTRQLAGTVHVHPNGRFVYAVNRASDTTMLEDTKVFAGGENTLV
                     AYAIDPATGEPTEIQHIDTGGIHCRTFHIDPSGRLLVAAHIMAMSVRDATGIRKVPAC
                     LSVFRIADDGRLQFERSYEVDVGDKTMFWMGMVTLHGE"
BASE COUNT          424 a          722 c          878 g          518 t
ORIGIN      
        1 ggcggcggcg ttgggcggct agtgggccga ttcacccgac cgcgtgggat gcttccgtcg
       61 ggatcggacc actcgtatcg caccgcagag aagcgcgata cgtcgcagtt ttgtcccagt
      121 ggccgattca cgcgggaaat cgcggtcacc tcgtgactgg cactttaccg cgatcgggga
      181 ctagaggaag tcgcggaccc gttcgatgtc ttccagcacg ctggaatggg acaccaggag
      241 gacttcgtcg aaaccgatct gctcgatccg tttcaggcgc cggcgggctt cgtccggagg
      301 gcaggccagc gaggtcgtca cctctttcag gccggcggat tcgggacggt cgccgagatc
      361 gacagcgacg ttggcgagca cggcgttggt gccgccggca tcccggtaga tcttcatgcc
      421 tagttcaagg tcttcccaac tactgtagcg gccggagggc gtccacccct ggcattcctg
      481 cgcggcgaag gtgatccagc gagggctgcg ccaggcaccc atcaggatgg gcgggccacc
      541 ctcacagccc ggccacaccg acagcgtgcc gccggagttg accgcttcgc cgcgccatgc
      601 gcgccgcatg gtttccagcg aacgtttcat gatgccgaag cgatggtcat agtcatagcc
      661 cagaagctcg aaatccgctc gggtggaacc gctgccgact ccaagctgca aacgattccc
      721 tgacagcgcc tgaaccgatt ggacgcgatg agcgagttcg attgggtttc gtagcggaag
      781 ttgcagcacc gagataccaa tttcgacccg ttcggtgacg gctgcgacga cggatagttc
      841 gatcagcggg tccagggtgg ctcggccgcg gcccagcgag tcgccgaccc atatgccggg
      901 gaagccgctg gcttcgatac ggcgggcata gtctgccatg cgggcgagca ggcggtcgtg
      961 cggttgcacg gtgggatcgg gacggatcat ggtgctgact ttcatgaccg ctctccattc
     1021 gttgctgaca tgtcgtggcc cttgtcacgt ttggcaagca gcatggcgca aatccggccg
     1081 cgggtaaaat ggcgggggcg tttgccggcg ctattcttcg ggttcggtgg tgaacagcaa
     1141 cggatagcct ttgcggcggc cggcgtccgt cgcgttcgtc gccttcgatt ccgcgatatc
     1201 cttcgtgtag acggcgacca cgcatgagcc gcgccggtga gcggtaacca tcacgcgctg
     1261 ggcctgctcc tcccccatgt ggaattccgc cttcagaacc atcacgacga attcccgtgg
     1321 ggtgaagtcg tcgttgatca aaatgacttt gtggagacgg gggcgttcgg ttttcaggtc
     1381 cgtcttgtcg tcggagtcag tggttatatc gggcatcggc actattcccc gtgcagcgtc
     1441 accatgccca tccagaacat ggttttgtcg ccgacatcga cttcgtagga tctttcgaat
     1501 tgcagccgcc cgtcatccgc tatgcgaaag accgaaagac atgccggtac tttgcgtatc
     1561 ccggtggcgt cgcggaccga catcgccatg atgtgggcgg cgaccagcag gcgtccggac
     1621 gggtcgatat gaaaagtgcg gcagtggatg ccgccggtgt cgatgtgctg gatctcggtg
     1681 ggttctccgg tcgccgggtc gatcgcatag gccaccagcg tgttttcacc gccggcgaag
     1741 acttttgtgt cctccaacat cgtggtgtcc gaggctcggt tgacggcata gacgaaacgg
     1801 ccgttgggat ggacgtggac ggtgccggcg agttgccttg tgtgggccgg ggcggccaaa
     1861 gtgggtttgg tgaacgacgc ggtcgcggac ggcgtgccgt tctgcgtggc gaacatcgcg
     1921 agcgcgtttt gccgttccag cgacacgtac acccaaggcc gcgtcgggtg aaaatccaga
     1981 tggcgcgggc cgaaaccgta gccgtcgttg ggagcgatgg atacttcgtg gctcagttgg
     2041 ccgtcggcgt agttgaagat ttttagcgcg cctggttcct cgggtttggt tttggtggcg
     2101 ctgtgtcctc ttgtgaccag gatgacgtgc ttgtcgtcgg gggtggctcg tacctggtgc
     2161 ggatagatgc cgggatcgat cggttcgggc ggcttgacct cgtgacccag cgtggcgtcg
     2221 gcgttgatcc ggtagacgcg gaaggcgccg gggttgctga aggcgaccag gatgtgcctg
     2281 gaggcgatat cggtggccat gtggatcggt cgtgtcggca gcgggatcgg gtcgccatgt
     2341 ggcgtcagca tgcctgattc cggatggacg gaaaacgcgg tgacctggtg actgttgccg
     2401 acgggtccca ggccggatgc actgttgctc gacgcgacat agaggtaacg gcccgagaca
     2461 tgcggccagg cgtattgcac gttctcggcg acggtgaccg attcatggcg ggacagtacg
     2521 gcgtgaccga cgtcgacggc at
//
LOCUS       DATAVD010000532         3793 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_236536, whole genome shotgun sequence.
ACCESSION   DATAVD010000532 DATAVD010000000
VERSION     DATAVD010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3793
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236536"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..488)
                     /locus_tag="VHX39_09880"
     CDS             complement(<1..488)
                     /locus_tag="VHX39_09880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991466.1"
                     /translation="MSFRPLMAAFGLLICASGAGPVLAQAPASSAPANPFAGLVRFGG
                     TVASSSGKSFVVHSQQGPDVTLTFPDKPNIMISNKGTVADLAAGKFVGCTAVKRADSL
                     LHATECHIFPESMRGMGEGHNPMGPPNTTMTNGNVATLNASGEVTSKSGGASATIKVT
                     YKG"
     gene            complement(612..1169)
                     /locus_tag="VHX39_09885"
     CDS             complement(612..1169)
                     /locus_tag="VHX39_09885"
                     /inference="COORDINATES: protein motif:HMM:NF021360.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2058 domain-containing protein"
                     /protein_id="HEX3991467.1"
                     /translation="MTSLSLRDQLLQAGLVNEHQVKEAERQAQRKQYQGQKQQPRAQR
                     NGPSPQEIAAKKQAEAKAARDQELSRKQQEKAQRKALYAQIRELVSQNKIARPDAEET
                     YNFIDAGKVRRIRADAALRERITRGDVALVRCEGRYELVPPAIAEKIRERDPRAVVAQ
                     GQTTGTAEVIDEAYKAFVVPDDLMW"
     gene            complement(1187..1783)
                     /locus_tag="VHX39_09890"
     CDS             complement(1187..1783)
                     /locus_tag="VHX39_09890"
                     /EC_number="1.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malonic semialdehyde reductase"
                     /protein_id="HEX3991468.1"
                     /translation="MHPKLDGPALDSLFRTARTRNGWSADPVSDEQIRELYELFKWGP
                     TSGNGSPARFVWVRSAQGKSQLAALASEANRPKILAAPVTVIIGYDLDFGEQMPKLFP
                     ARGEAMKAMFADAPVIAETTAFRNSSLQGAYLILAARALGLDCGPMSGFDNAGVDREF
                     FANTRVRSNFICSLGHGTDEKLFPRNPRLTFDEAGRFA"
     gene            2004..>3793
                     /gene="glgP"
                     /locus_tag="VHX39_09895"
     CDS             2004..>3793
                     /gene="glgP"
                     /locus_tag="VHX39_09895"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HEX3991469.1"
                     /translation="MNPEESKSALTELALDLRSAWDHGADHLWRHLDASLWEFTRNPW
                     TVLQTVSPSRIGEALADPQFRAEVDKVVCARRAALAKPAWFDVNHPGSALKQVAYFSM
                     EFMLSEALPIYSGGLGNVAGDQLKSASDLGVPVVGVGLLYSQGYFRQVIDRAGGQQAL
                     FPYNAPDQLPVTPLRTATGEWLRMKVDLPGFPVWLRTWQAQVGRTRLLLLDSNDPMNF
                     PAWRGITSELYGGGPELRLRQELILGIGGWRLLAALGIHPEVCHLNEGHAAFAVLERA
                     RSHMQETGQDFPTALAATRAGNLFTTHTAVAAGFDRFAPELIEQYLGEYAQHGLGIST
                     EQLLALGRANEQDWSESFNMAYLAIRGSGAVSGVSRLHGKVSRQIFSNLFPRWPEDEV
                     PVAYITNGIHTPTWDSAQAEALWGRACATDCWEAPDGAAAVGIRRVSDADLWGFRNES
                     RAALIESARVHLSRMLMVSGESQELIDSAKQLLDPNVLTLGFARRFATYKRPNLLLRD
                     TARLLRLLSHADRPVQLIIAGKAHPADEPGQALIRQWIQFIRGTDARNHVIFLADYDM
                     AVAEQLVHGVDVWINTPRRPWEACGTSGMKV"
BASE COUNT          624 a         1178 c         1275 g          716 t
ORIGIN      
        1 cccttatagg tgaccttgat ggtggcgctg gcgccgccgc tcttcgaggt cacctcaccg
       61 ctggcgttca gggtggccac gttgccattg gtcatggtgg tgttcggcgg ccccatcgga
      121 ttgtggcctt cgcccatgcc gcgcatgctt tccggaaaaa tatggcattc ggtggcatgc
      181 agcaggctgt cggcgcgctt gacggcggta cagccgacga acttaccggc tgccaagtcc
      241 gcgacggtgc ccttgttgct gatcatgatg ttgggcttgt ccgggaaggt cagcgtcacg
      301 tcgggtcctt gctgggagtg gaccacgaag ctcttgccgc tgctgctggc cacggtgccc
      361 ccaaatcgga ccaggccggc gaagggattc gccggtgcgg aggaggcagg ggcctgggcc
      421 agtaccggac ctgcgccgct ggcacagatc agcagcccga aggccgccat caggggtctg
      481 aaggacatca atgctctcct taacgcgctg caatgcgcat cgcaatttga tggtgtacag
      541 atgcagaccg acgcgagggg agtttcatta cacccgggca cgacaaatgg gcggcttggc
      601 cgcccgtccg ctcaccacat cagatcgtcg ggaaccacga aggccttgta ggcctcatcg
      661 atgacctcgg cggtgccggt ggtctgaccc tgcgcgacga cggcacgtgg atcgcgttca
      721 cggatcttct ccgcgatcgc cggtggcacc agctcgtaac ggccttcgca ccgcaccagg
      781 gccacgtcgc cccgggtgat gcgttcgcgc agtgcagcgt cggcgcgaat ccggcgtacc
      841 ttgccggcgt cgatgaagtt gtacgtctcc tccgcgtccg gccgcgcgat cttgttctgg
      901 ctcaccaact cgcggatctg cgcatacagc gccttgcgtt gcgccttttc ctgctgcttg
      961 cggctgagtt cctggtcacg ggctgccttt gcctcggcct gttttttcgc ggcgatttcc
     1021 tgcggcgagg ggccattgcg ctgcgcgcgc ggctgttgtt tctgcccctg atactgctta
     1081 cgttgtgcct ggcgctcggc ttccttgacc tggtgctcgt tgacgagtcc ggcctgcagc
     1141 agttgatcgc gcaatgaaag tgaagtcatg ggttatcccg gtcggttcag gcgaaccggc
     1201 cggcctcgtc gaatgtcagg cgcgggttgc gcgggaagag tttttcatcg gtgccgtgtc
     1261 cgaggctgca gatgaagttg gagcggacgc gggtgttggc gaaaaactcg cgatccacgc
     1321 cggcattgtc gaagccggac atggggccgc aatccagacc cagcgcgcgc gccgccagga
     1381 tcaggtacgc gccctgcagg ctgctgttgc gaaaggccgt ggtctcggcg atcaccggcg
     1441 catcggcaaa catggccttc atcgcctcgc cccgcgccgg gaagagcttc ggcatttgct
     1501 cgccgaagtc cagatcgtaa ccaatgatga ccgtgacggg tgccgcgagg atcttgggac
     1561 gattggcctc ggaggccagt gcagccagtt gcgacttgcc ctgcgccgag cgcacccaga
     1621 cgaatcgtgc cgggctgccg ttgcccgagg tcggccccca cttgaacagt tcgtagagct
     1681 cgcggatctg ctcatcgctg accgggtcgg cgctccagcc gttgcgggtc cgggccgtgc
     1741 ggaacaggct gtccagcgcg ggtccatcga gttttgggtg catgcaatga tcctgcaatt
     1801 ttatgacagc cgcgccggtt accgggctgc ggccgggagg ggaatggtac accgtgatcc
     1861 gcaatgggcg aagcatccaa atcctgcacg gattcagcca aaggatgaca ttcagctgta
     1921 gcgcagacgc gtaaaataag catgcgtgga gaaccctcct ttgagacgct cacgcgtccg
     1981 actgaaattc aagtagcgag actatgaatc cggaagaaag caagagtgcc ctgactgagc
     2041 tggcgctgga tctgcgctcc gcctgggatc atggagccga ccatctgtgg cgacatctgg
     2101 atgcatcctt gtgggagttc acgcgcaatc cctggaccgt gttgcagacg gtgtcgccga
     2161 gccgcatcgg ggaggccctg gcggatccgc agttccgtgc cgaagtggac aaggtggtgt
     2221 gcgcgcgccg cgcggcgctg gcaaagccgg cctggttcga cgtgaaccat cccggaagtg
     2281 cgctgaagca ggttgcgtac ttcagcatgg aattcatgtt gagcgaggcg ttgcccatct
     2341 attcgggcgg tctgggaaat gttgccggcg accagctcaa gtctgcgagc gatctgggcg
     2401 tgccggtggt cggcgtggga ctgctctaca gccaggggta tttccgccag gtcatcgacc
     2461 gcgccggcgg acagcaggcg ctgtttccgt acaatgcgcc cgatcaattg ccggtcacac
     2521 cgctgcgcac cgccaccggc gagtggctgc ggatgaaggt cgacctgccg gggttcccgg
     2581 tgtggctgcg aacctggcag gcgcaggtgg gacggacccg gctgctgctg cttgacagca
     2641 atgatccgat gaactttccg gcctggcgcg gcattacgag cgagctctac ggcggtggcc
     2701 ccgagctgcg tctgcgtcag gagctgatcc tcggcatcgg cggctggcgg ctgctggccg
     2761 cgttgggcat ccacccggag gtctgccacc tgaacgaggg ccacgcggcc ttcgcggtgc
     2821 tcgaacgggc gcgctcgcac atgcaggaga ccgggcagga tttcccgacc gcgctcgccg
     2881 cgacgcgcgc gggcaacctc ttcaccaccc ataccgccgt cgccgcgggc ttcgatcgtt
     2941 tcgcgccgga actcattgaa cagtacctcg gtgagtatgc gcagcacggc ctcggcatca
     3001 gcaccgagca gctgctcgcc ctgggccgcg ccaacgagca ggactggtcg gagagtttca
     3061 acatggcgta ccttgcgatc cgcggcagtg gcgcggtcag cggggtcagt cgcctgcacg
     3121 gcaaagtgag ccgacagatc ttcagcaatc tgttcccgcg ctggccggag gatgaggtgc
     3181 cggttgcgta catcaccaac ggtatccaca cgccgacctg ggattcggcg caggccgagg
     3241 cactgtgggg tcgtgcttgc gccaccgatt gctgggaagc gcccgatggc gcagccgccg
     3301 tcgggatccg ccgcgtcagt gacgcggacc tgtggggctt ccgcaatgag tcgcgggcgg
     3361 ccctgatcga gtcagcacgg gtgcacctgt cgcgaatgct gatggtgtcg ggcgagagtc
     3421 aggaactgat cgactcagcc aaacagctgc tggatccgaa tgtgctgacg ctggggttcg
     3481 cgcggcgttt tgcgacctac aaacgtccga acctgttgct gcgcgacacg gcacggctgt
     3541 tgcggttgct ctcccacgcg gatcgccccg tacagctgat catcgccggc aaggcgcacc
     3601 cggccgatga gccggggcag gctctgatcc gccagtggat acagttcatc cgcggcaccg
     3661 atgcgcgcaa tcatgtgatt ttcctcgccg actacgacat ggcagtcgcc gagcagctgg
     3721 tgcacggcgt cgacgtctgg atcaacacgc cgcgccgccc gtgggaggcg tgcggcacca
     3781 gcggcatgaa agt
//
LOCUS       DATAVD010000533         2224 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1912397, whole genome shotgun sequence.
ACCESSION   DATAVD010000533 DATAVD010000000
VERSION     DATAVD010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2224
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1912397"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..412)
                     /locus_tag="VHX39_09900"
     CDS             complement(113..412)
                     /locus_tag="VHX39_09900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991470.1"
                     /translation="MGLAAMPANPVVATSPAAQRPPAASPGALAAMAASRQAVQIQPA
                     VTAAASLVSHPVPTMQQIPQRRILARCRWSSTSLAWGTSTAATGVDAQKAADDPW"
     gene            475..1464
                     /locus_tag="VHX39_09905"
     CDS             475..1464
                     /locus_tag="VHX39_09905"
                     /inference="COORDINATES: protein motif:HMM:NF025001.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MinD/ParA family protein"
                     /protein_id="HEX3991471.1"
                     /translation="MHPPVPTQGSNGNSVQVFRMPPSLDEAQVTNRRKYAPQSGWRRT
                     LHRATRGYVNPGDARKEREREELLAQIRQAIAGDFRIAVLSVKGGVGKTTTTLGLGSA
                     LAIARRDRVVAVDANPDRGTLGERVRDDSARSTVRDLLTDPNINRYADVRGHTRMAAS
                     RLEVLASEQDPAAADVFDEADYRRTVGILGQYYNIILTDCGTGIMHSAMAGVLDLAHS
                     VVLVSSPAIDAVRSASATLDWLMRHSYSSLVREAHVVLSATRPGSAAVKVDKVYDFFG
                     AHCRSTHLIPFDPHLAEGADVDFGMLKPATRQAYLELAGAIAQNFPRLRADGP"
     gene            complement(1567..>2224)
                     /locus_tag="VHX39_09910"
     CDS             complement(1567..>2224)
                     /locus_tag="VHX39_09910"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX3991472.1"
                     /translation="SEMPQRNARADCPPPLRYQQILEAARTAIEEHGPDALTGQIAQR
                     AGLARPNVYRHFCSKEDLHDAVARSTYHELRHEILTRMNLPGTPIEIVRGLIAAQVSW
                     ADTHPNLYRFLVGHGYKRRSQQQRVQRSDLAAELTTAAARYFPRLADNPDAVEATLVG
                     LIGLFDASVLRWLSQPVSTRAQLIDRLTAQAWLIFDQHMREFGIHVDPAVSLSAPAGR
                     "
BASE COUNT          395 a          683 c          730 g          416 t
ORIGIN      
        1 ccgcgagccg cgccagccat taaccagggc tttgcaaacg gcgtcaagcc gccattgcag
       61 cggttgcctg cagatgacca gaatttgttg gttaacgagg agcctgtgcc atctaccacg
      121 gatcgtcggc ggccttctgc gcatcaactc ccgttgccgc cgtggatgtt ccccacgcca
      181 acgacgtcga actccaacgg caacgcgcaa ggatccgccg ctgtgggatc tgctgcatgg
      241 tcggcacagg gtgcgacaca agactcgccg ccgcagttac cgccggctgg atttgcaccg
      301 cctgacgcga cgccgccatt gccgccagcg cccccgggct ggccgctggg ggccgttgtg
      361 ccgccgggct ggtggccacc accgggtttg ccggcatggc cgcaagtccc atcaggcggg
      421 ccgcctccgc tcgactcgag ggcggctcgg ccggaaggcc tggaaccgca tgcgatgcac
      481 ccgcctgtgc ccacgcaagg gtcgaacggc aattcagtgc aggttttccg gatgccgcca
      541 tcgctcgacg aggcgcaggt gacgaatcgc cgcaagtatg cgccgcagtc aggttggcgt
      601 cgtaccctcc accgggccac ccggggctat gtaaaccccg gtgatgcgcg caaagaacgc
      661 gaaagggaag agctgcttgc gcagattcgc caggccatcg ccggggattt ccgcatcgcg
      721 gtgctctcgg ttaagggtgg ggtcggaaag accaccacga cactgggatt gggttcggcg
      781 ctcgcgattg cccgtcggga tcgggtggtt gcggtggatg ccaatcccga ccgcggaacg
      841 ctgggcgagc gcgtccgtga cgactccgct cgatcaaccg tgcgggatct gctgaccgac
      901 cccaacatca accgttatgc cgacgttcgc ggtcacactc gaatggcggc cagccgctta
      961 gaggtgctgg ccagtgagca agatccggcc gcggcagacg tgtttgacga ggcggactat
     1021 cggcgcaccg tcggcattct gggtcagtac tacaacatca tcctgaccga ctgtggtacc
     1081 ggcatcatgc actcggcaat ggccggagtc ctcgatctcg cgcactctgt tgtgctggtg
     1141 agttcacccg cgatcgacgc cgttcgaagc gcttcagcga cgctggattg gcttatgcga
     1201 catagctatt cgagcttggt gcgcgaggcg catgtagtat tgagcgccac acggcccggc
     1261 tcagctgccg tgaaggtgga caaagtctac gattttttcg gggcccactg ccgatccacg
     1321 catctgatcc cgtttgatcc acacctggcc gagggtgccg atgtcgactt cgggatgctc
     1381 aagcccgcca cgcgtcaggc gtatctcgaa ttggcaggcg ctattgcaca gaatttccca
     1441 cgcctgcggg ccgatggtcc atagtcatga cgcacgtgga catgcgccgc cgcctcggcg
     1501 tgtcggcaac gagttacctg tcgagagtta cctgtcgaca ccaggcacct cacccgaggt
     1561 tgtcagctac cgtccggctg gcgccgacag cgacactgca gggtcgacgt ggatgccgaa
     1621 ctcgcgcata tgctggtcga aaatgagcca cgcctgggcg gtaagtcggt cgataagctg
     1681 cgcgcgggtg cttactggtt ggctgagcca ccgcagaaca gatgcatcga acaacccgat
     1741 caatccgacg agcgtggcct cgacggcatc aggattgtcg gcgaggcgcg ggaaatagcg
     1801 ggctgcggcc gtagtgagtt ccgcagcgag gtcgctgcgc tgaacccttt gctgttgcga
     1861 cctgcgcttg tagccatggc cgaccaggaa tcgatacagg ttcgggtgcg tatctgccca
     1921 gctgacctgg gctgcgatga ggccacggac tatttcaatg ggagtaccgg gcaggttcat
     1981 gcgggtgagg atctcgtgac gtaactcgtg ataagtgctg cgggccaccg catcgtgaag
     2041 gtcttctttg ctgcaaaaat ggcgatagac gttggggcgg gctagtccgg cacgttgagc
     2101 gatctggccg gtcagtgcgt cgggcccgtg ttcttcgatc gcggtccgag cggcctcgag
     2161 aatctgttgg tagcggaggg gcggagggca atccgcgcga gcattgcgct gcggcatttc
     2221 actg
//
LOCUS       DATAVD010000534         1986 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_979308, whole genome shotgun sequence.
ACCESSION   DATAVD010000534 DATAVD010000000
VERSION     DATAVD010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1986
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_979308"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..310
                     /locus_tag="VHX39_09915"
     CDS             <1..310
                     /locus_tag="VHX39_09915"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007398048.1"
                     /note="catalyzes the formation of glycerone phosphate and
                     D-glyceraldehyde 3-phosphate from D-fructose
                     1,6-bisphosphate in glycolysis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HEX3991473.1"
                     /translation="AILRRLDAWSGDVKVMLKLTIPEAVDFYEPLIEHPKVLRVVALS
                     GGYSRADACKKLAVNHGMIASFSRALTEGLSRSMSDAAFDAALGQSIDEIYQASTVKV
                     "
     gene            451..846
                     /locus_tag="VHX39_09920"
     CDS             451..846
                     /locus_tag="VHX39_09920"
                     /inference="COORDINATES: protein motif:HMM:NF014173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEX3991474.1"
                     /translation="MATAVQILCVIAYTGPDRSNSEIVARSLRTNPVVVRRLMKCLEQ
                     EGLVEIHPGKDGGVQLARDPSQITLDQVYKAVEEDTGVFALRPNGNPSCRVNARMKDL
                     LTPIFGATDTAVEVTLRRTTLGSLLEAIG"
     gene            905..>1986
                     /locus_tag="VHX39_09925"
     CDS             905..>1986
                     /locus_tag="VHX39_09925"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3991475.1"
                     /translation="MKTLVEADQPDALAPDLTVTVRPRPIERSRQSAASPNQVLAIVC
                     IGIVLANLDLFIVNVGLPNIAREFSGASLENLSWILNGYAIAYAALLVFFGRLAERHR
                     RDRSFLLGVALFTAASAACSAATTVGMLVAFRVVQAAGAALMTPTSIGLILASFPAER
                     RGGAVRTWAAIGGLAAAAGPLAGGLLVMLSWRWIFLVNVPIGVAALAVGWWKLPQVPG
                     HDVPRPSSWAALLVTGGIGMLTFAIMKVNEWGWASRGIGLSAAVAVVCLVLFVRHCRR
                     SGNPFVDPALFRVRQFTGAALVMAPYSVAFGAMLFSVAVWGQAAWGWSALKTGLAIAP
                     GPLLVPITSLLLAGRLIARFGVAPVIT"
BASE COUNT          279 a          538 c          746 g          423 t
ORIGIN      
        1 ggccattctc cgccgcctcg acgcgtggtc cggcgacgtt aaggtgatgc tgaagctgac
       61 catcccggag gccgtggatt tctacgagcc cctgatcgaa catcccaagg ttttgcgggt
      121 ggtggcgctg tcgggcggct attcccgggc ggatgcctgc aagaagctgg ctgtcaacca
      181 tgggatgatc gcgagtttct cacgcgcgct gaccgagggg ctgtcgcggt cgatgagcga
      241 tgcggcgttc gatgcggcgc tggggcagtc gatcgatgag atctatcagg cgtccacagt
      301 gaaggtctga cgccggggcg gtttgggctg cagtgggatg ttgccgcggg gcacgggtgc
      361 gtgtcccgcg gttttgtttt gtcggagatt tttttggttg acctaataaa acataaccag
      421 tagtgtttcc ttatggcagc aaacacccgc atggcgaccg ccgtccagat tttgtgcgtc
      481 atcgcctaca ccggaccgga ccgaagtaac tcggagatcg tcgcgaggag tttgcggacg
      541 aacccggtgg tggtgcgacg gctgatgaag tgtctggagc aggagggtct ggtggaaatc
      601 catcccggca aggatggcgg cgtccaattg gcgcgcgatc ccagccagat caccttggac
      661 caggtctaca aggcggtgga agaggacacc ggagtgtttg cgctgcggcc gaacggcaat
      721 ccgtcctgtc gggtgaacgc tcggatgaaa gatctgctga cgccgatctt tggggcgacg
      781 gatacagcgg tcgaggtgac gctgcggcgg acgacgctgg ggagcctgct ggaggcgatc
      841 ggctagtttt tttgcctgcg aataaaacgc aatgagtttt gttctattat gaggacgggt
      901 cagcatgaag acgcttgtgg aagccgatca gccggatgct ttggccccgg atctgaccgt
      961 gacggttaga ccgcggccga tcgagcggtc gaggcagtcc gccgcctcgc caaaccaggt
     1021 cctggcgatc gtctgcatcg ggatcgtcct ggccaatctt gacctgttta tcgtcaatgt
     1081 cggcctgccg aacatcgctc gggagttcag cggggcgtcg ctggagaatt tgtcgtggat
     1141 cctgaacggc tacgcgatcg cctacgccgc gctgttggtg ttcttcgggc ggctggcgga
     1201 gcgccaccgg cgcgaccgga gtttcctgct cggcgtggca ttgttcaccg ctgcctcggc
     1261 ggcctgttcg gcggcgacca cggtcggcat gctggtcgcg ttccgcgtgg tgcaggcggc
     1321 gggggcggcg ctgatgacgc cgacctccat cgggctgatc ctggcgtcgt ttccggctga
     1381 gcggcggggt ggcgcggtgc ggacctgggc ggctatcggc gggctggcgg ctgcggcggg
     1441 tccgttggcc ggcgggctgc tggtgatgct gagctggcgc tggatcttcc tggtcaacgt
     1501 gccgatcggg gtggctgccc ttgctgtggg ctggtggaaa ctgccgcagg tgccgggcca
     1561 tgacgtgcct cggcccagtt cgtgggcggc gctgctggtg accggcggca ttggaatgct
     1621 gaccttcgcg atcatgaagg tgaacgagtg gggttgggcg tcgcgcggca ttgggctgag
     1681 cgccgcggtg gcggtggttt gtctggtgct gttcgtgcgg cattgccggc ggtcggggaa
     1741 tccgttcgtc gatcccgcgt tgttccgagt ccggcagttc accggcgcgg cgctggtgat
     1801 ggcaccgtat tcggtggcgt ttggggcgat gctgttctcg gtcgcagtgt gggggcaggc
     1861 ggcgtggggg tggtcggcgc tgaaaaccgg cctggcgatc gcacctggtc cgctgctggt
     1921 gccgatcacg tcgttgctgc tggcggggcg gctgatcgcg cgcttcgggg ttgctccggt
     1981 gatcac
//
LOCUS       DATAVD010000535         3015 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3213841, whole genome shotgun sequence.
ACCESSION   DATAVD010000535 DATAVD010000000
VERSION     DATAVD010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3015
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3213841"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..224)
                     /locus_tag="VHX39_09930"
     CDS             complement(<1..224)
                     /locus_tag="VHX39_09930"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX3991476.1"
                     /translation="MIVVEIKDGWRKLVLNRPEKLNAVSPAMLTELLQAIGDAEADGA
                     TRALLLTGNGRGFCAGQELGSDVTPGANGPP"
     gene            complement(238..966)
                     /locus_tag="VHX39_09935"
     CDS             complement(238..966)
                     /locus_tag="VHX39_09935"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX3991477.1"
                     /translation="MRAAIFRDGQITVDTVPDPSPAEHAARTEPVAVGWHAVQYARLT
                     SDDVPLVIGCGPVGLAVICGLKILGAHPIIAANFSPARRALAERMGADIVIDPATASP
                     YQSWTEAATPAGYDPSRFARLFNIGPRQRPGVIFECVGVPGMIQQVMEGAPQGARVVV
                     VGVCMETDRMEPFFGIVKQLNLQFVLGYTAEEFTDSLRYLAEGRVDAEALITGTVGLD
                     GVAGAFADLANPERHAKIMIDPWR"
     gene            complement(1018..1851)
                     /gene="panC"
                     /locus_tag="VHX39_09940"
     CDS             complement(1018..1851)
                     /gene="panC"
                     /locus_tag="VHX39_09940"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEX3991478.1"
                     /translation="MRVARTLADLRSAVADLRASHDAVGLVPTMGALHDGHRALVRAA
                     VTSGAAAVTSIFVNPLQFGAAEDLSRYPRDEAGDLATLEACGNALVWLPDRETMYPPG
                     DATTISVTGPAENWEGAARPGHFRGVATVCAKLFGQVRPDRAYFGEKDWQQLQVIRRM
                     VDDLHLPLSIVPVVTVRDLDGLALSSRNRFLSETERALAPLLHTTLTETAHAIAGGDL
                     ASGPLAAARETLENAGFAVEYFALVDGPTLQEIPRTGPNARLIATARLGSVRLLDNVA
                     A"
     gene            1914..2660
                     /locus_tag="VHX39_09945"
     CDS             1914..2660
                     /locus_tag="VHX39_09945"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase family protein"
                     /protein_id="HEX3991479.1"
                     /translation="MKLAGKIALVTGGSRGIGRATALAFAAEGADIAFCHLDDGDKAE
                     QTAAEIRAHGRRAMHRSLDVADVRAGRDFAAEVASDFGPVDILFNNAGMNIRKPFEAY
                     TEVEFDRIIAVHLKGMFFMAQAVYPAMVARGQGCIINVASQRGLKGAVNSAPYSAAKA
                     AIMGFTRALAWEATPKGVRINAIAPGPIVTDLTATMTAEDRQAFIDALPIGRFGRPEE
                     IAATALLLAGPDGGFYVGATLSPNGGDVMY"
     gene            2657..>3015
                     /locus_tag="VHX39_09950"
     CDS             2657..>3015
                     /locus_tag="VHX39_09950"
                     /inference="COORDINATES: protein motif:HMM:NF023354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-dependent oxidative N-demethylase subunit
                     alpha family protein"
                     /protein_id="HEX3991480.1"
                     /translation="MTPLPRETIHLPFEAGPYRMAMGLVSVPEVEWFDIDEHYQAEVA
                     ERQRLMTERRAEVFSMQPCAAAASAETLTMLTEHLARVHPDWFACDGTTFYNRLTGED
                     VALTEDQPLALAGRLVQ"
BASE COUNT          564 a          962 c          951 g          538 t
ORIGIN      
        1 ggtggaccgt tggctccggg cgtgacgtcg gagcccagtt cctggccggc gcaaaacccg
       61 cggccattgc cggtcagcaa caacgcgcgg gtggcgccgt cagcctccgc atcgccgatc
      121 gcctggagta actcggtcag catcgccggg ctcacggcgt ttaacttttc aggccggttg
      181 agcaccagct tgcgccaacc gtccttgatt tcaacaacga tcacggcgtt cgctccttta
      241 ccgccacggg tcgatcataa ttttggcgtg acgttccgga ttggcgaggt ccgcgaatgc
      301 gcccgccacg ccgtcaaggc cgacggtgcc ggtgataagc gcctcggcat ccacccggcc
      361 ctccgccaga taccgtaagc tatcagtgaa ttcctcagcg gtgtagccga gcacgaattg
      421 aaggttcagt tgcttgacga tgccgaagaa cggttccatg cgatcggtct ccatgcatac
      481 gccgaccacc acgacgcgag cgccttgtgg agcgccctcc atgacctgct ggatcatccc
      541 cgggacgccg acgcattcga agatgacgcc tggcctctga cgcggcccaa tattaaacaa
      601 tcgggcgaac cggcttgggt cgtagccggc gggcgtcgcg gcctcagtcc aggattggta
      661 gggtgaggca gttgcgggat cgatgacgat gtcggcaccc atccgctcgg ccaaagcgcg
      721 ccgcgccggc gaaaagttcg ccgcaatgat cgggtgcgca cccaggatct tgaggccgca
      781 gatcactgcc agtccaaccg gaccgcaacc gatcaccaga ggcacatcgt cgctcgtaag
      841 gcgggcgtat tgcaccgcgt gccaacccac cgcgacgggt tcggtccgcg cggcgtgttc
      901 ggccgggctc gggtcgggca cggtgtcgac tgtgatctgg ccatcgcgaa agatcgcggc
      961 gcgcatggcg atgcctccct gggttcggat cagggtaggc ggttccgccc gatcccctca
     1021 agccgcgacg ttatcgagca atcgcaccga gccaagccgc gctgtcgcga tcagccgggc
     1081 gtttgggccg gttcgcggta tttcctgcag agtcggccca tcgacgagag cgaaatattc
     1141 gactgcgaag ccagcgttct ccagtgtttc gcgcgcggcc gccaaagggc ctgatgccag
     1201 gtcgcccccc gcgatcgcgt gcgccgtctc ggtcaatgtg gtgtgcagca gcggcgccaa
     1261 cgcgcgctcg gtttcgctta gaaatcggtt gcgcgatgat aacgccaggc catcgagatc
     1321 acggaccgtg acaaccggaa caatcgataa tggcagatgt aaatcgtcga ccatccgccg
     1381 tataacttgc agttgctgcc agtccttttc gccgaaatac gcccgatccg gcctgacctg
     1441 gccaaacagt tttgcacaaa ccgtcgccac gccgcggaaa tgccctgggc gggccgcccc
     1501 ctcccagttt tctgcgggcc cggtaacgga aatcgtggtg gcgtcgccgg gcggatacat
     1561 cgtttcccga tccggtaacc aaaccaacgc gttgccgcat gcctcgagag tcgccaggtc
     1621 gcctgcctca tcgcgaggat aacgcgacaa atcttcggcg gccccgaact gcagtggatt
     1681 gacgaagatg gacgtcaccg ccgctgcacc ggacgtcact gcggcacgga ccaacgcgcg
     1741 atggccgtcg tgcaaggcac ccatggttgg aaccagacca accgcatcat gcgatgcacg
     1801 caggtcagcg acggccgatc gcaaatcggc gagggttcga gcaacacgca tgccatgagc
     1861 ttggtcaggc tgcgatcccg aggcaacatg gtgcgacagc atgggagacc agcatgaaac
     1921 tcgcgggaaa aatcgcgctc gtcaccggcg gctcgcgggg cattggccgc gccaccgcac
     1981 tcgctttcgc cgccgagggc gccgatatcg cgttttgcca cctcgatgat ggtgacaagg
     2041 cggagcaaac ggcggcagaa attcgagccc atggccggcg tgcgatgcat cgttcgcttg
     2101 acgtcgccga tgtcagggcc ggcagggatt tcgccgccga ggtggccagt gatttcggtc
     2161 cggtcgacat tttgttcaac aacgccggca tgaacatccg caagccgttc gaggcctata
     2221 ccgaagtgga attcgaccgc atcatcgccg tgcacctgaa gggcatgttc ttcatggcac
     2281 aggccgtcta tccggcgatg gtcgcgcgtg gtcagggttg catcatcaac gtcgcctcgc
     2341 agcgtggtct gaagggcgcg gtcaattcgg cgccctattc cgccgccaaa gccgcgatca
     2401 tgggtttcac gcgcgcactg gcctgggagg cgacgccgaa aggcgtgcgg atcaatgcca
     2461 tcgcgccggg tcccattgtc accgacctga ccgcgaccat gacggcggag gatcgccagg
     2521 cgtttatcga cgcgctaccg atcggccgct ttggccggcc ggaggaaatt gccgccaccg
     2581 cgctgctgct cgccggcccc gatggcggat tctatgtcgg tgcaactctc tcgcccaatg
     2641 gcggggacgt gatgtattga caccgttacc acgcgaaacg atccatctgc cgttcgaagc
     2701 tggtccgtat cgaatggcca tggggctggt gtccgttcct gaagtggaat ggttcgacat
     2761 cgacgaacat taccaggcgg aggtcgccga acggcaacgc ctgatgacgg agcgccgtgc
     2821 agaagtgttc agtatgcaac catgcgcggc cgcggcgtcc gccgaaacgt tgacgatgct
     2881 gaccgaacat ttggcccggg tgcatcccga ctggttcgcg tgcgacggca cgacgtttta
     2941 caatcgcctg accggggagg atgtggcgct cacggaagat caaccgctcg cactggctgg
     3001 ccgtctggtg cagga
//
LOCUS       DATAVD010000536         2880 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_421462, whole genome shotgun sequence.
ACCESSION   DATAVD010000536 DATAVD010000000
VERSION     DATAVD010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2880
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421462"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VHX39_09955"
     CDS             <1..724
                     /locus_tag="VHX39_09955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3991481.1"
                     /translation="ADLSSLRIAVSAGETLPAPVFEEWTRKTGKPILDGIGSTEMLHI
                     FITNRIGDMAPGTTGKPVTGYEARVVDDEMNEVPRGSVGHLAVRGPTGCRYLSDERQG
                     KYVRDGWNLTGDSFVQDAAGSFHFAARSDDMIISSGYNIAGPEVEAALLSCAEVTECA
                     VIGVADEDRGQIVQAHVVLVSGVVPDDATRLRLQNHVKATIAPYKYPRSVKFVEALPR
                     TQTGKIQRFRLRIVDDPGGAGC"
     gene            735..1313
                     /locus_tag="VHX39_09960"
     CDS             735..1313
                     /locus_tag="VHX39_09960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003625105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HEX3991482.1"
                     /translation="MLRKTYTRVMALAASPYAGWWLALIAFAEASFFPIPPDALLLPM
                     ALARPRSAWRYAAICTVASVIGGALGYLIGFAVFDQLARPILDVYGYGAAYAAFQAKF
                     QQYGLWIILIKGLTPIPYKIVTIAAGAARFDFWLFMMASVLTRGARFFLVATLLHFFG
                     DAVRDFIERRLTLVTSAFAVAVVVGFLALKLL"
     gene            complement(1378..2637)
                     /locus_tag="VHX39_09965"
     CDS             complement(1378..2637)
                     /locus_tag="VHX39_09965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HEX3991483.1"
                     /translation="MTTYILIAMILGIAAGGVIHDQVATPATQKLIAGYVSIGSTIFL
                     RLIKMIIAPLVFSTLVVGIGHMSDAGTVGRVGGKAMLWFVSASLVSLTLGLILVNLFE
                     PGVGIHKVLSGAISGVDAHAMTLDGFVKHVFPDSAIRPMVDNEILQIVVFSIFFGIAC
                     AAMGARAKLVLEAIEGLSHIILRVTGYVMKLAPPAVFCAMTATIATNGLGILVNYAKF
                     MGEFYFGLICLWILLILVGFVILGPSVRRLVMLVREPFLLAFSTASSEAAYPKMLEQL
                     AKFPIARNISSFVLPLGYSFNLDGTMMYCTFASVFIAQAYDIPLTIGTQIAMLLTLML
                     TSKGVAGVPRASLVVIAATLSQFSLPEEGLLLILGIDTFLDMGRSATNVIGNSLATAV
                     VAKWEGLLVADEDTIEMIEEMEVEPVV"
BASE COUNT          537 a          866 c          944 g          533 t
ORIGIN      
        1 tgcggatttg tcgtcgctgc ggatcgcggt gtcggcgggc gagacccttc cggcgccggt
       61 gttcgaggaa tggacgcgca agaccggcaa gccgatcctc gatgggatcg gttcgacgga
      121 gatgctgcac atcttcatca ccaatcgcat cggcgacatg gcgcccggca ccaccggaaa
      181 acccgtgacg ggctatgaag ctcgggtggt ggacgacgag atgaacgagg tgccgcgcgg
      241 ttcggtcggg catctggcgg tgcgcgggcc aacgggctgc cgttatctgt cggatgagcg
      301 gcaggggaaa tacgtgcgcg atggctggaa cctgacgggg gattccttcg tgcaggacgc
      361 ggcggggtca tttcatttcg ctgctcggtc cgacgacatg atcatttcgt ccggctacaa
      421 catcgccgga cccgaggtcg aagcggcgct gctgtcctgt gccgaggtga cggaatgcgc
      481 cgtcatcggc gtggctgacg aagatcgcgg gcagatcgtg caggcccacg tcgtgctggt
      541 gagcggcgtg gtaccggatg atgccacgcg actgcggctg caaaatcacg tcaaggcgac
      601 catcgcgcct tacaaatacc ctcggtcggt gaagttcgtg gaggcgctgc cgaggaccca
      661 gaccgggaag atacagcgtt tccggctgag gatcgttgat gacccaggtg gcgccggctg
      721 ctaaaggccc gcgcatgctg cgaaaaacat atacccgcgt catggcgctg gctgcgtccc
      781 cctatgccgg ctggtggctg gcgttgatcg ccttcgcgga agccagcttt tttcccattc
      841 cgccggatgc gctgctgctg ccgatggccc tggcacggcc cagatcggcg tggcgctacg
      901 cggcgatctg caccgtggcc agtgtcatcg gcggggcgct ggggtatctg atcgggttcg
      961 cggtgttcga ccagctcgcg cggccgattt tggacgtgta tggctacggg gcggcctacg
     1021 cggcattcca ggcgaaattt cagcaatacg ggctttggat catcctgatc aaaggcctga
     1081 cgccgatccc ctacaaaatc gtcaccatcg cggccggcgc ggcccggttc gatttctggc
     1141 tgttcatgat ggcgagcgtg ctgaccagag gggcgcgatt ctttcttgtg gcaaccctgc
     1201 tgcatttctt tggcgacgcc gtgcgcgatt tcatcgagcg gcggttgacg ctggtgacaa
     1261 gcgcttttgc ggtcgcggtg gttgtcggat ttctggcgct gaagctgctg tagaccagtg
     1321 ccccctgtgt tcgccgcatc gcgcggcgaa cacaggggcg gcggggagcg aggcggctta
     1381 tacgaccggc tccacctcca tttcctcgat catctcgatg gtgtcctcgt cggcgaccag
     1441 cagcccctcc catttggcga ccacagcggt ggccagggag ttgccgatca cgttggtcgc
     1501 cgaacggccc atatcgagga aggtgtcgat gcccaggatc agcaacagcc cttcctcggg
     1561 caggctgaac tggctgagcg tcgccgcgat caccaccagg gaggcgcggg gcaccccggc
     1621 gacgcccttg ctggtcagca tcagcgtcag cagcatggcg atctgggtgc cgatggtgag
     1681 cggaatgtca taggcctgcg cgatgaacac cgacgcgaag gtgcagtaca tcatcgtgcc
     1741 gtcgagattg aacgagtagc ccagcggcag cacgaagctg gagatgttgc gggcgatggg
     1801 aaatttcgcc agttgctcca gcattttcgg atacgcggct tccgaactgg ccgtcgagaa
     1861 cgccagcagg aacggttccc gcaccagcat gacaaggcgc ctgacgctgg gacccaggat
     1921 cacgaaaccg accaggatca gcagtatcca gaggcagatg aggccgaaat agaactcacc
     1981 catgaacttg gcatagttca ccaggatgcc caggccgttg gtggcgatgg tcgcggtcat
     2041 ggcacagaac accgcgggcg gggccagttt catcacgtag ccggtcaccc gcaggatgat
     2101 gtgcgacagg ccctcgatgg cttccagcac cagcttggcg cgcgcgccca tcgccgcgca
     2161 ggcgatgccg aagaagatcg agaacaccac gatctgcagg atctcgttgt ccaccatcgg
     2221 gcggatcgcc gagtcgggaa acacgtgctt gacgaacccg tccagggtca tcgcgtgagc
     2281 atcgacgccg gaaatggctc cgctgagcac tttgtggatg ccgacgcccg gctcgaacaa
     2341 gttaaccagg atcaggccca gggtcagcga caccagggac gcactgacga accacaacat
     2401 ggccttgccg ccgacccggc caaccgtgcc ggcgtccgac atgtggccaa tgccgaccac
     2461 aagcgtcgag aacaccagcg gcgcgatgat catcttgatc agccgcaaga agatggtgct
     2521 gccgatagaa acatagccag cgatcaattt ctgtgtcgcc ggcgtggcga cctgatcgtg
     2581 gatcacgcct cccgcggcga tccccaggat catcgcgata aggatgtagg ttgtcattcg
     2641 gctggacttc attgcgaatc gcgccccctg ttgaacaagc gtcttcgcga tcatgctatg
     2701 gcacgcggtc acattacaag aagttaacag gcgcgttttc ccggtttttt atcgccccgc
     2761 tgccgtacgt ggacaggctc ccgcatcgca gcctgatgcc tggggcacag ggcgtccccg
     2821 caggatctga cattcagacg gtcagtgggc gctcgccggg tctcagtcgg gtctggcaga
//
LOCUS       DATAVD010000537         5573 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3400852, whole genome shotgun sequence.
ACCESSION   DATAVD010000537 DATAVD010000000
VERSION     DATAVD010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5573
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3400852"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(376..1128)
                     /locus_tag="VHX39_09970"
     CDS             complement(376..1128)
                     /locus_tag="VHX39_09970"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX3991484.1"
                     /translation="MIETSVDERLVATVTVNNPGQRNALGNAGKRELAEAIEDVSATV
                     GLRVLVLTGAGDKSFIGGANLKEMPGFVRHQASEGPALTHRVCEAIRRTPVPVIARIN
                     GWCLGAGLEIAASCDMRAAADTARFGMPEVLFGLPSGMEACLLPQLIGWGKTRELVFT
                     GRHIDCAEAMACHLVERVASPAGLDAAVEDWVAAILKAGPEAIRAQKELVRDWERMSI
                     ADAVQQGIRAVAAAHGSDEAKGLMEAFLRRKS"
     gene            complement(1125..1736)
                     /locus_tag="VHX39_09975"
     CDS             complement(1125..1736)
                     /locus_tag="VHX39_09975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017405992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxychromene-2-carboxylate isomerase"
                     /protein_id="HEX3991485.1"
                     /translation="MAELECFFDCSSPWTYFAFESLLKMQEEIGVTIKWRPFLVGGIF
                     NAVNQSVYNSRDAPVPAKKAYGQKDQQDWARYLGLPIHYRPSVFPVNSVKAMRACIVL
                     EAEDKLVPFARAVFKAYWTDDQDISKAPVLAGICDGLGIDSDKLFAATEQQPVKDTLR
                     TNTQEAIDRGSFGSPTIFVGGDDMYFGNDRMPLIKDAVLRRRS"
     gene            complement(1813..2538)
                     /locus_tag="VHX39_09980"
     CDS             complement(1813..2538)
                     /locus_tag="VHX39_09980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3991486.1"
                     /translation="MIDLHYWPTPNGKKVTILLEEAGIPYNIVPVNIGRGDQFTPAFL
                     KMNPNHRMPVMVDNAPTGGGEPIAIFESGAIMLYLAEKVGRFYPQDLRGKYAVTEWLI
                     WQMANQGPKLGECGHFRRLGDKQGDQSYAVRRFTDEANRLYGVLNNRLYGSKYLAGDD
                     YTIADMICYPWTVNWKVQGQDIEEFAHMKRWQEELAARPAVQRGMAVGAGLSEDASKL
                     SAEEQERRAKIMYNQRARPVPAG"
     gene            2686..3843
                     /locus_tag="VHX39_09985"
     CDS             2686..3843
                     /locus_tag="VHX39_09985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991487.1"
                     /translation="MPRRAAAAAFGLLLAANTALAAPYMIVGNDEKSNWDPQGKPLVS
                     PTGKDTVQIVDVAKPEAPKIVATLNLENSIVGPPTNLAIAPDNSIALVADSMTTLDEN
                     GKQKLVPTNKLWVIDLKANPPKLVQTVTLGKQPSGLSFSPKGDIALVCNRGDGTISVL
                     KIDGTQVTQTGTIQIGAGVSTVEFTPDGKHALAVKSPENAVAILDVDGDKVTYNKLDL
                     PTYQFPYNVVVTPDSKLAITADNGFGGSADGNMDAVSVVDLQFPHPHVIAHVTVQDAP
                     EGLAMSPEGTIAAVANVNGSNNPPAWFHHKNGTVTILRIQGQTVTPIKTIDVGAVPEA
                     VAFTPDGRYIYVGNYSDQDFSILKVTGTTVEDTGKRFKVGGHPASARMSAH"
     gene            3898..4608
                     /locus_tag="VHX39_09990"
     CDS             3898..4608
                     /locus_tag="VHX39_09990"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX3991488.1"
                     /translation="MTDIVLVHSSDLHVDDDPHQGPYGDDGTTGLRVVLNAAKTHAAD
                     YVLLVGDIFDNNRQSPAIVAQCVALLNDVARPVIVLPGNHDPVTSDSVWRRGGLDKLP
                     HVHIIGVTHDLTVHFPDHDLEVWGHAHVDYNNMVPLRDPHPRTARWHVTLAHGHYEDD
                     GVPPLRPSWLISNAEIEATRTDYLALGHWNRAAAVGTGTTVPAYYSGSPDLAKTVNVV
                     RLRGNGTVDVAREPIAWD"
     gene            4754..>5573
                     /locus_tag="VHX39_09995"
     CDS             4754..>5573
                     /locus_tag="VHX39_09995"
                     /inference="COORDINATES: protein motif:HMM:NF012432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HEX3991489.1"
                     /translation="MNRPTKSRASGSASAERRPTLKEQVVANLSLPGNPRYQPKDLQS
                     VFGYDNLFRAVAEVEIATLKTLADIGIIPTADIASLTPAVEQDLLAISTTEVEDVERN
                     ITRHDIRAWVRIAQGKVAPGLRRWIHVPLTSYDALDTARALQFVRGHQVVQRLTGKVI
                     GLFAQQVDVFALQPQIGRTHGQHALPITVGFWFATILNRILTNIQSANTEAANLVGKI
                     SGAVGVYNAQVGLGIAARSGDHTFEHRVLQKLGLKPAPISTQILPPEPLADYLFA"
BASE COUNT         1161 a         2031 c         1449 g          932 t
ORIGIN      
        1 acagaattgc gctatcccga cggacgggca tggtcgggca agggcgattt cagctatgtg
       61 caggagcctc gcataatcgg ccgatgagcg gcctcgaaac aacccccatg atgagcgtag
      121 ctcagtcccg aacgaccgga aacgaacgcg agcgggcgca tcagccttgg ttaccaaatg
      181 tcagatttag accaccaggc cgccatcaaa ttcatttcgt aacaagatac gccttccctc
      241 tccctggccc tccgtctacc tgcgtgttta taaatccctg gcctgacatc cactcaagag
      301 aacaacggcc acacgccaca tagtccgaca acgatcggcc ccgaactttc aaagcaacga
      361 agtcaccgca gcacactacg acttccgccg cagaaacgcc tccatcagac ccttcgcctc
      421 atccgaccca tgcgccgccg caaccgctcg gattccctgc tgcaccgcat ccgcgatcga
      481 catgcgttcc caatcgcgca ccagttcctt ctgcgccctg atcgcctcag gcccagcctt
      541 caggatcgcc gccacccagt cctcgaccgc cgcatccagc ccagccggcg acgccacccg
      601 ctcaaccaaa tgacacgcca tcgcctcggc acaatcgata tgccgcccgg taaacaccag
      661 ttcccgcgtc ttcccccaac cgatcaactg cggcagcaga cacgcctcca tccccgaagg
      721 cagcccgaac aacacctccg gcatcccaaa ccgggccgta tcggccgcgg cgcgcatatc
      781 gcaggacgcg gcgatctcca accccgcccc gaggcaccag ccattgatac gcgcaatcac
      841 cggcaccggc gtccggcgga tcgcctcgca cacccgatgg gtcagcgccg gcccctccga
      901 cgcctgatgc cgcacgaacc ccggcatctc cttcagattc gccccaccga taaacgactt
      961 gtcgcccgca ccggtcagca ccagcacccg caatcccaca gtggccgaga cgtcctcgat
     1021 cgcctccgcg agttcgcgtt tgccggcatt ccccagggca ttgcgctgcc ccgggttatt
     1081 gaccgttacc gtcgcaacca accgctcatc gacagacgtt tcgatcatga ccgccggcgc
     1141 aacaccgcgt ccttgatcaa cggcatgcga tcgttgccga aatacatgtc gtccccgcca
     1201 acaaagatcg tcggagaccc aaagctcccg cgatcgatcg cctcctgcgt attggtccgc
     1261 aacgtatcct tgaccggctg ctgctcggtc gccgcgaaca gcttgtcgga gtcgatcccc
     1321 agcccatcac aaatccccgc cagcaccggc gctttcgaga tatcctggtc atccgtccag
     1381 tacgccttga acaccgcccg agcgaacgga acaagcttgt cctcggcctc cagaacgata
     1441 catgcccgca tcgccttcac gctgttcacc ggaaacacac tgggccgata atggatcggc
     1501 agcccaagat aacgcgccca gtcctgctga tccttctgcc cgtaagcctt cttcgccggc
     1561 accggcgcgt cgcgggagtt atagacactc tggttcaccg cattgaagat gccgccaaca
     1621 agaaacggac gccacttgat cgtgacgcca atctcctcct gcatcttcag cagcgactcg
     1681 aacgcgaaat aagtccacgg actggaacaa tcaaagaaac attcaagttc agccattctc
     1741 acaggatcct ttgtatttgc cgtcgtcaag cgcaaccgct ccagccatca ccgttggacg
     1801 aaaccccaca cactaacccg ccggcaccgg ccgagcgcgc tggttgtaca tgatcttcgc
     1861 ccgccgctcc tgctcctccg ccgacagttt cgatgcatct tccgacagcc cggcgcccac
     1921 cgccatgcca cgctgcaccg caggccgagc ggccagttct tcctgccacc gcttcatatg
     1981 ggcgaattcc tcgatgtcct ggccttggac tttccagttc accgtccacg gatagcaaat
     2041 catgtcggca atggtatagt cgtccccggc gagatacttg ctcccgtaca accgattgtt
     2101 cagcaccccg tacaaccggt tcgcctcatc ggtaaaccgc cgcaccgcat aggactgatc
     2161 gccctgcttg tcgcccaggc ggcggaaatg cccgcattcg cccagcttcg gcccctggtt
     2221 ggccatctgc cagatcagcc actccgtcac cgcgtatttg ccacgcaggt cctgcggata
     2281 gaaccgcccg accttctccg ccaggtacag catgatcgcc ccggattcga agatcgcgat
     2341 cggttcgccg cccccggtcg gagcattgtc caccatcacc ggcatgcgat gattagggtt
     2401 catcttcagg aacgccggcg tgaactggtc gccgcggccg atattcaccg gcacgatgtt
     2461 atagggaatg cccgcctctt ccagcaggat cgtcaccttc ttgccgttcg gcgtaggcca
     2521 ataatgcagg tcgatcatca gcttggctcc tctcgattgt ggttaccccc atgctacccc
     2581 caatcaccac ccagggccaa cgacgccctt gcggcccggc ccggtcctgt cccacactca
     2641 tccgcgtaaa aatataaaaa cgggaggaaa tcgatgtcgt cacccttgcc ccgccgcgcc
     2701 gccgccgccg cgttcggatt gttactcgcc gccaacaccg cattggccgc gccctacatg
     2761 atcgtcggca acgatgagaa gtccaactgg gacccccagg gcaagcccct ggtttcaccc
     2821 accggcaagg acaccgtgca aatcgtcgac gtcgccaagc ccgaggcgcc caagatcgtt
     2881 gctaccttga acctggagaa ctccatcgtc ggcccgccca ccaacctcgc catcgccccc
     2941 gacaacagca tcgccctggt ggcggattcg atgaccacgc tggacgagaa cggcaagcag
     3001 aagctggtgc cgaccaacaa attgtgggtc atcgacctga aggccaaccc gccgaaactc
     3061 gtgcagaccg tgaccctcgg caagcagcca tccggtctgt cgttcagccc gaagggcgac
     3121 atcgccctgg tgtgcaaccg cggcgacggc accatcagcg tattgaagat cgacggcacg
     3181 caggtcaccc agaccggcac gatccagatc ggcgccggcg tctccaccgt cgaattcacc
     3241 ccggacggca agcacgccct ggcggtgaaa tcgcccgaga acgcggtcgc gatcctcgac
     3301 gtagacggcg acaaggtgac ctacaacaag ctggacctgc cgacctatca gttcccctac
     3361 aacgtcgtgg tgacaccgga ctcgaaactg gcgattaccg ccgacaatgg cttcggcggg
     3421 tcggccgacg gcaacatgga cgcggtcagc gtggtggacc tgcaattccc gcacccgcac
     3481 gtcatcgccc atgtcaccgt gcaggacgcg cccgaaggcc tggccatgag ccccgagggc
     3541 accatcgccg cggtcgccaa cgtcaacggg tccaacaacc cgccggcctg gttccaccac
     3601 aagaacggca ccgtcaccat cctgcgcatc caaggccaga ccgtgacacc gatcaagacc
     3661 atcgatgtcg gcgcggtgcc ggaggccgtg gccttcaccc cggacggccg gtatatctac
     3721 gtcggaaact acagcgacca ggatttctcc atcctgaaag tgaccggcac caccgtcgag
     3781 gacaccggca agcgcttcaa ggtcggcggc caccccgcat cggcacgcat gagcgcgcat
     3841 tgaccgaagc ctccccggtg cgagagaatt gggctcgaag caccgggtga ggttggcgtg
     3901 actgatattg ttctagtgca tagttccgat ctgcacgtcg atgacgatcc gcatcaaggc
     3961 ccctacgggg acgacggcac gaccggcctg cgggtcgtgc tgaacgccgc gaaaacccac
     4021 gcggcggact atgtgcttct ggttggcgat atcttcgaca acaatcgcca gtcccccgcc
     4081 atcgtcgccc aatgcgtcgc cctgctgaac gacgtcgcca ggccggtgat cgttctgcca
     4141 ggcaaccatg accccgtgac atcggattcg gtctggcggc gcggcggcct cgacaaactg
     4201 ccgcacgtcc acatcatcgg cgtgacacac gacctgacag tccacttccc cgatcatgac
     4261 ctggaggtct ggggccatgc gcatgtcgac tacaacaaca tggtgccgct gcgcgacccg
     4321 catccccgga ccgcccgctg gcacgtaacc ctggcgcacg gtcattacga ggacgacggc
     4381 gtgcccccgc tgcgcccctc ctggctgatc agcaacgccg agatcgaggc aacccgaacc
     4441 gactacctcg ccttgggcca ttggaaccgg gccgccgcgg tgggtaccgg aacgacggtg
     4501 ccggcgtatt actccggctc tcccgacctg gcgaaaaccg tgaacgtcgt ccgcctgcgc
     4561 ggcaacggaa cagtggacgt cgcccgcgaa ccgatcgcct gggattaggg cccgatcgcg
     4621 gtaacgcgcg agtcacgagg tgaccgcgat tttccgcgtg gatcggccac tcggacaaaa
     4681 ctgcgatgta tcgcgcttct ccgatgcgcg atactagtgg tccgatcccg acagaagcat
     4741 cccatgcggt cgggtgaatc ggcccacaaa atcaagggcc agtggttctg catcggccga
     4801 acgccggcca acgctcaagg aacaagtcgt ggcaaacctc tcactgccag ggaacccccg
     4861 ctaccaaccg aaagacctgc aatcggtctt cggctacgac aacctgtttc gggccgtggc
     4921 cgaagtcgaa atcgcgacat tgaagacatt ggccgacatc ggcatcattc ccacagccga
     4981 tatcgcctcg ctcacgcctg cggttgagca ggacctcctc gccatttcga caaccgaagt
     5041 cgaagacgtc gagcgcaaca taaccaggca cgacatccgc gcatgggtgc gcatcgccca
     5101 aggcaaggta gccccaggac ttcgccgctg gatccatgtg cctctcacca gctacgacgc
     5161 gctcgacacc gcgcgagccc tgcagttcgt gcgcgggcac caggtcgtac agcgactcac
     5221 cggcaaagtg atcggtctct tcgcccagca ggtcgatgtc ttcgcccttc agccgcagat
     5281 cggccgcaca cacggacagc acgcgctgcc cataaccgtc ggcttctggt tcgcaacgat
     5341 cctcaaccgc attctcacca acatccaaag tgcgaacacc gaagcggcaa acctggtggg
     5401 aaagatctcc ggcgccgtcg gcgtctacaa tgcccaggtg ggtctcggca tcgcagcccg
     5461 ctccggcgac cacaccttcg aacaccgtgt cctccaaaag ctcggtctca aacccgcacc
     5521 catcagcacg cagatcctac cacccgaacc actcgccgat tacctgttcg cct
//
LOCUS       DATAVD010000538         1503 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1912617, whole genome shotgun sequence.
ACCESSION   DATAVD010000538 DATAVD010000000
VERSION     DATAVD010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1912617"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            31..867
                     /locus_tag="VHX39_10000"
     CDS             31..867
                     /locus_tag="VHX39_10000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991490.1"
                     /translation="MRTLRQPGPIHQQRIDSFGISTQSLTFPLAAGRSLLEAATKPMV
                     DAGWRGGTLSFAGALFDPFRYVMPGPPDDASHVAYFSAPCAPAGPTRIEQANATFGWH
                     DGKPFLHCHAVWTEANGARRGGHILPSEAIVAAPAMVQAWGFFEATIATSHDPETNFT
                     LLQPSGTSQAHPDAVVARVRPNEDIISAVETIARLHHLPDATIRGSLGSLIGAQFEDG
                     TIVPDNATEVLVRSGRVTTGMADIDLLAVDGRGHVHEGQLARNANPVCITFDLLLTRD
                     AA"
     gene            complement(970..1326)
                     /locus_tag="VHX39_10005"
     CDS             complement(970..1326)
                     /locus_tag="VHX39_10005"
                     /inference="COORDINATES: protein motif:HMM:NF037081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEX3991491.1"
                     /translation="MPAAKKAAPAKKAAAPAKKAAAKSAAQATVTLKQIAAGVAASHE
                     IPKKLAEAVLDDLVTATSQHLKKGDKVRLTGLGILQVRARAARMGRNPATGEAIKIKA
                     SKKIAFRPAKELKESV"
BASE COUNT          269 a          487 c          439 g          308 t
ORIGIN      
        1 ggcatgcaag gctacgcggt gggtcgttga atgcggacgc tgcgacaacc cggcccgatc
       61 catcagcaac ggatcgacag cttcgggatc tccactcaaa gtttgacgtt tccactggct
      121 gccggccgtt ctctgctgga agccgcgaca aagccaatgg tcgatgcggg ctggcgcggc
      181 ggcacgctca gctttgccgg cgcactattc gatccgtttc gttatgtgat gccaggtcca
      241 cccgacgatg cctcgcacgt cgcgtatttc tcagccccgt gtgcgcctgc cgggcccacc
      301 cggatcgagc aggccaatgc cacattcggc tggcacgacg gcaaaccgtt tctgcactgc
      361 cacgccgttt ggacagaggc caatggcgcg cgccgcggcg gccatatcct gcccagtgag
      421 gcgatcgtcg cagcgcccgc catggttcag gcgtggggat ttttcgaagc cacgatcgcg
      481 acttcgcacg atccggaaac gaactttacg ttgctgcaac cctcaggcac gtcacaggct
      541 cacccagacg cggtggtcgc ccgggtccgt ccaaacgaag atatcatcag cgcggtggaa
      601 accattgctc gcctccacca cctgcccgac gccaccattc gcggcagcct gggcagcctg
      661 atcggagccc agttcgagga tggaacgatc gtgccggata acgcaacgga ggtgctggtc
      721 cgatctggac gtgtcacgac cggaatggcg gacatcgatc tgctggcggt tgatgggcgc
      781 ggccacgttc atgaagggca gctggcacgc aacgccaacc cggtatgcat cacattcgat
      841 ctgctgctga cccgcgacgc agcttgaatt cggtccgccg caccaagacg gatattgtta
      901 tcgtacagca atcaaaaccg gaaaaccgcg tggtcttccg gcttggatca acccgttcgt
      961 cgaaacgtct cagaccgact ctttcagttc cttcgccgga cggaaggcga tcttcttgct
     1021 ggccttgatc ttgatcgctt ctccggtcgc cgggttgcgg cccatgcgag cggccctcgc
     1081 ccgaacctgc aagatgccaa ggccggtcag ccgaaccttg tcacccttct tcaaatgctg
     1141 cgatgtcgcg gtgaccagat catcgagcac ggcctcggcg agcttcttcg gaatttcgtg
     1201 cgacgcggcg acgcctgccg cgatttgttt cagagtgacc gttgcctgcg cggcggattt
     1261 ggcggcggcc ttcttagcag gcgcggccgc tttctttgcg ggggcggcct tctttgctgc
     1321 gggcatggaa tcctcactgt tcagcgctgg taccgggcgg accacaccat agcggcgcga
     1381 gtcgggcaac agattcctga caccaaacct taattttccg ctgttttgcc gcattcgcct
     1441 tgcaatcgtc tcgggtttcc cacgcatcag acgtttgcgt cacccaatcc gacccaattc
     1501 ttg
//
LOCUS       DATAVD010000539         1827 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3214061, whole genome shotgun sequence.
ACCESSION   DATAVD010000539 DATAVD010000000
VERSION     DATAVD010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3214061"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1035
                     /locus_tag="VHX39_10010"
     CDS             <1..1035
                     /locus_tag="VHX39_10010"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-terminal binding protein"
                     /protein_id="HEX3991492.1"
                     /translation="YAAQHKRRGSEMAMRILWPNLAAELVPVVREVVGPGFETDFCRN
                     FAEVTDEQWANADAIVGGCPPQYIDKLRKCRIFVKYGVGYDDVDIERFGKLGIPVCNT
                     PDYGTREVADHAIALMLTLAKSIAYHDQELHADLRGNWRPAHNPFGRRLSDCTYGVVG
                     MGRIGTAAARRAKAFDMDVVFYDPYQPNGYQFAIGVWRADTLAELMGQCDFVSIHAPL
                     TAETRNLIGTDAFAAAKRGMILINTARGPIVDIDALYDAMKDRTVLAAGLDVLPQEPA
                     NPQARLIAAWQHNEDWIRHRLVLTPHSAFYTPESMHDNRTFASRTAARYLRDGRLENC
                     VNKQFVVARN"
     gene            complement(1361..1522)
                     /locus_tag="VHX39_10015"
     CDS             complement(1361..1522)
                     /locus_tag="VHX39_10015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991493.1"
                     /translation="MRADYDSPQAGVSRWKLFGDLCNTSTVGCTAHFPSPSSGRITRW
                     GDGFGFVSV"
     gene            1556..>1827
                     /locus_tag="VHX39_10020"
     CDS             1556..>1827
                     /locus_tag="VHX39_10020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991494.1"
                     /translation="MDHIAGDDRICAWPAETDRIVVDRMPRFGNKLHGVVELMRAGHD
                     FLSLRGNDRQHGIGDPWGGRGILPFGFRPMRQLFVGEDLSGLREGR"
BASE COUNT          351 a          546 c          580 g          350 t
ORIGIN      
        1 tatgcggcgc aacataagcg acgaggaagc gagatggcga tgcgcattct ttggccgaac
       61 cttgcagccg agttggtgcc ggtcgtccgc gaggtggtcg ggcccggatt cgaaaccgat
      121 ttctgcagaa acttcgcgga agtgacggac gagcaatggg ccaatgccga cgccatcgtc
      181 ggtgggtgtc cgccgcaata tatcgacaag ctgcgcaagt gccgcatctt cgtgaagtac
      241 ggtgttggct acgatgatgt cgacatcgag cgcttcggca agctaggcat ccccgtctgc
      301 aacacgcccg attacggcac gcgcgaggtg gcggaccacg ccatcgcgct gatgctgacg
      361 ctggcgaaga gcatcgcgta tcatgatcag gagctgcacg ctgatctccg aggcaactgg
      421 cggccggcgc acaatccgtt cggccgtcgg ctctccgact gcacctatgg cgttgtcggc
      481 atgggtcgta tcggtaccgc agcggcgcgg cgtgctaagg cgttcgatat ggacgtcgtg
      541 ttctacgatc cgtatcaacc gaacggttat cagttcgcga tcggcgtctg gcgcgccgac
      601 acattggccg aactgatggg ccagtgcgat ttcgtgagca ttcacgcgcc gctcacggcg
      661 gagacacgta atctgatcgg gaccgacgcg tttgccgcgg cgaaacgcgg gatgatcctt
      721 atcaacacgg cgcgcgggcc gattgtcgat atcgacgccc tatacgacgc gatgaaggat
      781 cgcactgtcc tggcggccgg gctcgatgtg ctgccgcagg agccagccaa cccgcaagct
      841 cgcctgattg ctgcctggca gcacaatgag gattggattc gccatcgcct ggtgctgacg
      901 ccgcactcgg ccttttacac acccgaaagc atgcatgaca accgcacctt cgcctcgcgc
      961 acggcggcgc gttatctacg cgacgggcgg ctggagaact gcgtaaacaa gcaattcgtg
     1021 gtggcacgaa actgacggag ccgcggcgct gaacgcgtcc tatcctaccg atggataggc
     1081 tcgccagacg gcttaacagg aggtgtcatt tcccgtcgca gttcccgggc gccattgacg
     1141 ccgcccgtga cctgcgcgct gggccctacg gtgatttggc gccgaagtgg gatccctcgc
     1201 cgatcacccc cctccaaacg aattagggtc acgttgtcag agattccgat gcggttggcc
     1261 ggtgtcacac ttcggcgccg gttcacaggc aaagggtatt tcgaggttcg cttgggggct
     1321 gtcgagacag cagagcgact actggtggca acgccgccgg tcaaaccgag acgaacccga
     1381 acccgtcacc ccagcgcgtg atccgacctg acgatggtga cggaaaatgt gccgtgcagc
     1441 ccaccgtcga cgtattgcac agatcgccga acagcttcca tcgtgacacg ccggcttgcg
     1501 gcgaatcgta gtctgctcgc atggcgggct ccggatagcg cgcctgcaaa ggcgagtgga
     1561 tcatatcgcc ggtgatgacc gcatctgcgc ctggcctgcc gaaacggatc gaatagtggt
     1621 cgatcgtatg ccccggtttg ggaataagct acacggcgtc gttgaactga tgcgcgctgg
     1681 tcacgacttc ctgtcgttgc gaggcaatga tcggcagcac ggaatcggtg atccatgggg
     1741 cggccgaggg atcctgcctt tcggtttccg tccaatgcgt cagctttttg tcggcgaaga
     1801 cctatctggc cttcgggaag gtaggca
//
LOCUS       DATAVD010000540         2750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_607458, whole genome shotgun sequence.
ACCESSION   DATAVD010000540 DATAVD010000000
VERSION     DATAVD010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_607458"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(389..883)
                     /locus_tag="VHX39_10025"
     CDS             complement(389..883)
                     /locus_tag="VHX39_10025"
                     /inference="COORDINATES: protein motif:HMM:NF015999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/EbsC family protein"
                     /protein_id="HEX3991495.1"
                     /translation="MLADTLDIHDRIMALLAESGADYRTMEHEPEGRTDLASRIRGHV
                     LSQAAKAMVVAVRHCDNERRRFVLAVVPGDRRVSFDAIARVLRGRGASLASTHEAAML
                     TNCAMGAVPPFSFHPQLELMVDEGLMAEPQIVFSAGRLDCSVLIRSDDYLRLAGPCLE
                     RIAA"
     gene            complement(1189..2130)
                     /locus_tag="VHX39_10030"
     CDS             complement(1189..2130)
                     /locus_tag="VHX39_10030"
                     /inference="COORDINATES: protein motif:HMM:NF013166.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3991496.1"
                     /translation="MSDTATLVSRLRDQDIRLWIEGDRLRCGAPADKLDAELRGTLVS
                     RKAEIMAFLQEAKALASPSSTMVPIKRDGSKPPIFAVSGHAGDVFCLRALAHRLDPDQ
                     PVIGVRPPGLDGSEPLTSVEDLARFQVEQIRDYRPKGPYLIAGHCAGGTIAFEVAQQL
                     RAAGHEVGLLALIGSPYPTSFRFAPQLMLRLKNWAGTVLSGSLRERQQRIMRKVRERL
                     QSPAEEIGITPAITEARRRVEGATVAAVRRYRPQHYAGQIDLFIAADFWHKPQRWRAV
                     AETVREHYLGDFETNDLLIGSHVPVLAQALNARLQSI"
     gene            complement(2127..>2750)
                     /locus_tag="VHX39_10035"
     CDS             complement(2127..>2750)
                     /locus_tag="VHX39_10035"
                     /inference="COORDINATES: protein motif:HMM:NF024591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantetheine-binding protein"
                     /protein_id="HEX3991497.1"
                     /translation="TDDQVKIRGYRIELGEIEAAVAALPTVRSCAVAAREDNAGKMRL
                     VAYLIAQDSQVSSSEELRTGLRTTLPEHMIPAQFVYLDMLPLTPNGKVDRRALPEPER
                     VTAAPANGSEPVTKTEQALAAIWSDLFKLRSPGLHEDFFDLGGDSLTGVGLLVRVQAT
                     FGVNLELASLFERSTIAGLAEVIDMLVLTTPGAAPVAGSEPRVEFDL"
BASE COUNT          515 a          888 c          818 g          529 t
ORIGIN      
        1 gtcgttgcgg ccggtgtgcg cttcgttgta gccgctcagc ccatcttcga ggatggtttt
       61 gaacgtgagg tcgggactgt cgatcagggt gaccatcgtt gttctccggt gcgctctcag
      121 gttagcaatc tatccgggcc ctgctgacag cgttctgtca gcagccaacg ggccgcgtct
      181 gtcccgtcgt cgccgttctt gcgccaatga ggttctgcaa ggccatggct gacccgcgga
      241 gtgaacccgt cccgccaagg tgcaaggttg cctggagttg ctgctgcctc agtcaagatc
      301 aggcacggca tcggacgtcg cgacgtttcg accgggccgc ccaaatccat gcggcatcgg
      361 tatgacggag acggaagccg accgttgctt acgcggcgat gcgctccagg cagggtccgg
      421 ccagcctgag gtagtcgtcc gagcgaatca agaccgaaca atcaaggcgg ccggcactga
      481 acactatctg cggctccgcc atcagacctt catcgaccat caactcaagt tgcggatgaa
      541 acgaaaatgg cggcaccgcg cccatggcac aattcgtcag catcgcagcc tcgtgtgtgc
      601 tggccaggct ggcgccgcgc ccgcgcagca cgcgagcaat cgcatcgaag ctgacccggc
      661 ggtcccccgg cacgacggcg aggacgaacc ggcgtcgctc gttgtcgcaa tggcgaactg
      721 cgacgaccat tgccttggcg gcctggctca gaacgtgacc gcggatccgg ctggcgagat
      781 cagtccgacc ctccggttcg tgttccatgg tccgataatc ggccccgctt tccgcgagta
      841 gcgccatgat ccggtcgtga atatcgagag tgtccgcaag cataatacaa gatcctaatc
      901 gttttggagg gtcgctgcgc cacgtcgtca gtagccgcct attgcagcac catcatcaga
      961 aattgagcta tttgctatct atcaccgcca gaatgtatcg tatgacgcaa ccaatcttgc
     1021 gcatttaatc gaaggcgggg gccggccatg acgaatgtgt tttcccccgc ttgctattgc
     1081 tccaaatcca aaccttccgt tgcttccgta catagacagt ttcgcacaaa accttgagct
     1141 ggtcggacgc cgaccgtgtg ccggctgtcg gcgtcctgca atcacgctct aaatggactg
     1201 cagcctggca ttcagtgcct gcgccagtac cggaacgtgc gaaccgatca gcaggtcatt
     1261 ggtttcgaag tcccccagat agtgctcgcg cacggtctcg gcgaccgctc gccagcgttg
     1321 cggcttatgc caaaagtctg cagcaatgaa caaatcgatc tgaccggcat aatgttgtgg
     1381 ccggtaacgg cgcaccgcag cgaccgtcgc accctcaacc cgccgccgcg cctcggtgat
     1441 ggcgggagtg atcccgatct cctccgcagg cgactgcaac cgttcgcgca ccttgcgcat
     1501 gattcgctgt tgccgttccc gcaacgagcc ggacagaaca gttcccgccc agtttttgag
     1561 gcgtaacatc agctgcggcg caaacctgaa gctggtcgga tacggactgc cgatcagtgc
     1621 cagcaggccg acctcatgtc ccgccgctct caattgttgc gcgacctcga acgcgatcgt
     1681 tcctccagcg caatgcccgg caatcagata cggccctttc ggacggtagt cacggatttg
     1741 ctcgacctga aagcgcgcca ggtcctcgac cgaggtcaac ggttcgctgc cgtcaaggcc
     1801 cggtggccgc acaccgatca ccggttgatc tgggtccagg cggtgcgcca acgcccgcag
     1861 gcaaaacacg tcgcccgcat gcccagacac agcgaaaatc ggcggtttgc tgccatcccg
     1921 cttgatcggc accatagttg acgacgggct ggcgagcgcc ttcgcctcct gcaggaaggc
     1981 catgatctcg gccttccggc tgaccagcgt gccgcgcagt tcggcgtcca gcttgtcagc
     2041 cggtgcgccg caccgcagcc ggtcgccctc gatccacaat cttatgtcct ggtcgcggag
     2101 ccgcgagacg agggtcgcag tatcgctcac aggtcgaact ccacgcgcgg ttcggaacca
     2161 gccacagggg cggcacccgg cgtggtcagc accagcatgt cgatgacttc cgccagtccg
     2221 gcgatcgttg atcgttcaaa cagacttgcc agttcgagat tgacgccgaa ggtcgcctgg
     2281 acccgcacca gcaaaccgac gccggtcagc gagtcgccgc ccagatcgaa gaagtcttcg
     2341 tgcagcccag gggagcgaag tttgaacagg tcggaccaga tggccgccag tgcttgctcg
     2401 gtttttgtaa cgggttcgct gccatttgcc ggcgcggcgg taacgcgttc cggttccggc
     2461 aaagcgcggc ggtcgacttt gccgttcggt gtcagcggca gcatgtcgag ataaacgaac
     2521 tgcgcgggga tcatgtgctc cggcagcgtt gttctcaggc cggtgcgcaa ttcctcggaa
     2581 ctcgaaacct gactgtcctg cgcaatcaga tacgccacca gacgcatttt gcccgcattg
     2641 tcctcgcgcg cggccacggc acacgaacgc accgtgggca gcgcggcgac agcagcctcg
     2701 atctcgccca gttcgatgcg gtagccgcgg attttgacct ggtcgtcggt
//
LOCUS       DATAVD010000541         1529 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1726422, whole genome shotgun sequence.
ACCESSION   DATAVD010000541 DATAVD010000000
VERSION     DATAVD010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1726422"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1443
                     /locus_tag="VHX39_10040"
     CDS             <1..1443
                     /locus_tag="VHX39_10040"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobN"
                     /protein_id="HEX3991498.1"
                     /translation="LLELEYTLIPHGLHVVGEGLNEEQRTSMLDAAGVTDAAERARLD
                     VLLAVDHEVPAIVHALDAGYIRPAPGGDLLRTTEVLPTGRNLHGFDPFRIPSAFAVRD
                     GASQADRLLARHQADAGTLPETVAIVLWGTDNLKTEGGPIAQALWLIGAEPRCDSYGR
                     VAGAQLVPLERLGRARIDVVATLSGIFRDLLPLQTKLLAEAAFLAASADEPLERNFIR
                     KHALAFQAEHGGSIADAALRVFGNTDGAYGANVNQIIGNGAWNDEDELADAYLKRKGF
                     AYGVDGPPRRHDAVLADALSHVDLTYQNLDSLEVGVTTVDHYFDSLGGISRAVRRARG
                     GVATAVYIGDQTRGEGTVRTIAEQVSLETRTRALNPKWYEALLSHGYEGVREIEAQVT
                     NTLGWSATTGEVAPWIYEKLSETFVLDPAMRERLAALNPTASAKIANRLIEAHERNYW
                     APGDTMREALQRAGEELEDRLEGVGLEAAA"
BASE COUNT          280 a          444 c          532 g          273 t
ORIGIN      
        1 ctgctggaac tcgagtatac actgatcccg cacggtctgc acgtagtcgg cgaggggctt
       61 aacgaagaac agcggacctc gatgctggac gcggccggcg tgacggatgc cgccgagcgt
      121 gcgcgtctgg atgtgttgct ggcggtagat cacgaggtgc cggccatcgt gcatgccctg
      181 gacgcgggct atatccggcc tgcgcccggt ggcgacctgc tgcgcacgac cgaggtgctg
      241 cccacgggcc gtaacctgca cggtttcgat ccgttccgta tccccagcgc tttcgccgtg
      301 cgtgacggtg ccagccaggc cgaccggctt ctcgctcggc accaggccga tgccggaacg
      361 ctgccggaga cggtggcaat cgttctgtgg ggcaccgaca atctgaaaac cgagggcggc
      421 ccgatcgctc aggccctatg gctgatcggc gcggagcccc gctgtgacag ctatggccgt
      481 gtcgcggggg cgcaactggt gccgctggaa cggctgggcc gggctcgcat cgatgtggtg
      541 gcaaccttgt ccggcatctt ccgtgacctg ttgccgttgc agacgaagct tctggcggaa
      601 gccgcatttc tggctgcatc tgccgatgag cccttggagc ggaatttcat ccgcaaacat
      661 gccttggctt ttcaggccga acatggcgga tcgatcgcgg atgcggcgtt gcgggtgttc
      721 gggaacaccg atggcgcgta tggcgcgaac gtcaaccaga tcatcggcaa cggcgcctgg
      781 aatgatgagg acgaactcgc cgatgcgtac ctgaagcgca agggttttgc ttacggcgtt
      841 gatggcccgc cacgccggca cgatgccgtg ctggcggatg cgttgtctca tgtagatctg
      901 acctatcaga atcttgactc tctcgaagtg ggtgtcacca cggttgacca ttattttgat
      961 tccctgggcg gaataagccg ggcggtgagg cgggcgcggg gcggggtggc gacggcggtt
     1021 tacattggtg accagacgcg tggcgagggt accgttcgca cgatcgccga acaggtttca
     1081 ttggaaacac gcacacgcgc gctgaatccg aagtggtatg aagcgctgct gtcgcacggc
     1141 tatgaaggtg tgcgggagat cgaggcacag gttaccaaca ccctcggctg gtccgcaacg
     1201 accggcgaag ttgcaccctg gatctacgaa aagctgtccg agacattcgt gctggacccg
     1261 gccatgcgcg agcggctggc ggcgctgaac ccgaccgcgt cggcgaaaat cgccaaccgc
     1321 ctgatcgagg cgcacgaacg aaactactgg gcaccgggcg acacgatgcg ggaagccctg
     1381 cagcgcgcag gtgaagaact tgaagaccgg ctcgaagggg ttggtctgga ggcagcggca
     1441 tgacggtgat caggcgaatt gcagcgcgtg gtgacgggca aggcagcgtg caggtgcgca
     1501 tggagcccga cctgaagatc ggcaacgcc
//
LOCUS       DATAVD010000542         5426 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_979798, whole genome shotgun sequence.
ACCESSION   DATAVD010000542 DATAVD010000000
VERSION     DATAVD010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5426
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_979798"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..382)
                     /locus_tag="VHX39_10045"
     CDS             complement(<1..382)
                     /locus_tag="VHX39_10045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991499.1"
                     /translation="MRHTFMILALLAIAVPARADNAPMIHPSRDVAVEYRSGAAQPGP
                     AAEPGRVVTMRFSSKTDRIRIEGASGRGFVILDPGAGVMTMIMQEAHVYAERPADPGM
                     IAMFQATSAAFKKTGSDTVAGVACT"
     gene            480..1280
                     /locus_tag="VHX39_10050"
     CDS             480..1280
                     /locus_tag="VHX39_10050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HEX3991500.1"
                     /translation="MADPGRIGIDVGEKLQLEDAVAWAARTGVQIIDVQLDGAGIRID
                     AARAGRVREQCERHGIRLGLHTSSAVNIAELAPLVGDAVDAYLQAYIDAAATLGAGWI
                     VVHAGYHFSSNVTRRMEAGLQRLRRAVAYAETKNTCLLLENLNKEPPDAEVHYLAHTL
                     EEWRWYYDKIDSPAFALSFTANHAHLVPEGVEGFLAAIPLERVFEVRLADCFRNGREE
                     HLLPGQGDFDFAGLFQVLSARGYRGHYTNAFGSLDDMLLARNKFADML"
     gene            complement(1304..3757)
                     /locus_tag="VHX39_10055"
     CDS             complement(1304..3757)
                     /locus_tag="VHX39_10055"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3991501.1"
                     /translation="MDGIAGATQAPPDSAAPAAGTTVQDAVEPRSRLWTWPKMHQLLF
                     VAFTLVAAVPIAVLAIWESQSAFQNELDSVRERHLLVARNLTSTMSRYVKDLKATFPL
                     AFTPGSMNQPGAGLINLLGALDVIHVFILNPDGSVASVLPGLTDDIETQNPPDPVRFK
                     LLRALADDMPDEPVLSKLYHDAANRPVFYLVKALPDRKLGVGIVSTRYLVSLQQGISF
                     GDRGHAVITDGSGQVIADPSKERVAASTDISNVPVVAAMMRGETGVGQFYSASANGMM
                     IAGYAVVPETGWGVMVPQPVSELRHRADVINQMAVVIAVASFAAAALISYLVALLLAR
                     PVRQIAATAEAVMNGNEEVSAPTFGLWAPSELRSLGRAFNTMLADLRRKASETLQALR
                     QAETSNRVRSQFLANMSHELRTPLNGVVGMLELLRLSGASTTQQNYIDQAGRSAQSLL
                     RMMGDVLDLSEMEVGKIGLKPEPFRLDGLITGLREQYGEQAAAKGLTMAVSLPEAMQT
                     GLIGDAQRIEQMLGNLLSNAIKFTASGGIALRVSAVDETPSTIQIRFEVGDTGTGIAP
                     EMQQKIFEAFTQGDGSTTRRYGGSGLGLAIVKELCQRMNGEFGVQSMIGVGSTFWLAL
                     PFEKATMEPALETPVETVQPRPPQRLTAPPAPPPVAVPPMPYPQRIVTAAGLEFQEVL
                     REAGRASVRILLVEDNPANLRVTQALLETLGCEVRTAVNGIHAVAAYRDGGEYDLVLM
                     DCQMPEMDGYQATRAIRHVEAMLGRFTPIVALTAHAMDGSREECLAAGMNDQLSKPLT
                     LAALTRKLLEWLSVDRPAA"
     gene            3989..4591
                     /gene="plsY"
                     /locus_tag="VHX39_10060"
     CDS             3989..4591
                     /gene="plsY"
                     /locus_tag="VHX39_10060"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEX3991502.1"
                     /translation="MLMLPFVFPGYLFGSIPFGLLLTRMAGLGDIRAIGSGNIGATNV
                     LRTGHKGLAVATLLLDAAKGAFAVGVFRYLGPPDAALWAGLGAVVGHLFPVWLAFKGG
                     KGIATSAGVLLAIAWPVALAAGIVWLIVAVTARMSSLASLAACVAAPVAAVFVADSKV
                     AWLTLAIAAMVIARHHENIRRLLAGTEPRIGQRGSNAGSA"
     gene            5282..5351
                     /locus_tag="VHX39_10065"
     tRNA            5282..5351
                     /locus_tag="VHX39_10065"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5312..5314,aa:Met,seq:cat)
BASE COUNT          940 a         1706 c         1698 g         1082 t
ORIGIN      
        1 tcgtgcaggc aacacccgcg acggtgtcgg aaccggtctt cttaaatgcc gcgctggttg
       61 cctgaaacat tgcgatcatg cccgggtcag ccgggcgctc ggcgtacacg tgggcttcct
      121 gcatgatcat ggtcatcaca ccggcgccgg gatcgaggat gacaaaaccg cggccactcg
      181 caccctcgat ccggatccga tcggtcttgc tggagaaacg catcgtcacc acccggccgg
      241 gttcggccgc tggtcccggc tgcgccgcgc cggagcgata ttccacggcg acgtcccggc
      301 tgggatggat cattggcgcg ttatccgccc gcgccggaac ggcgatcgcc agcagggcca
      361 gaatcataaa cgtatgccgc atggtggttc tccttccgcc gcgaccgtac caaatccggc
      421 tcgcggttgc caccgatcgc gggtaacact tggtcgcacg gcagattttg gaggaaacca
      481 tggcggatcc cgggcggatt ggcatcgacg ttggggaaaa actccagctc gaggacgccg
      541 tcgcatgggc ggcgcggacc ggcgttcaga tcatcgacgt gcaactcgac ggcgccggca
      601 tccggattga cgccgcacgc gccggccggg tccgcgagca gtgcgaacgg cacggcattc
      661 gccttggctt gcacacgtca tcggcggtca acatcgccga actggcacct ctggtgggtg
      721 acgcggtcga cgcctatctg caagcctaca tcgatgctgc cgccacgctc ggcgccggct
      781 ggatcgtggt gcacgcgggc tatcacttta gttcaaatgt gacacggcgc atggaggcgg
      841 gtctgcagcg cctgcgtcgt gccgtggctt acgccgagac caaaaacacc tgcctgctgc
      901 tggagaatct gaacaaggaa ccgcccgacg ccgaggtcca ttatctggcg cacacgctcg
      961 aggaatggcg ttggtactac gacaagatcg actcacctgc ctttgcccta tcgttcactg
     1021 ccaatcacgc acacctggtg ccggaaggcg ttgaaggatt cctggctgcc atcccgctgg
     1081 aacgcgtgtt tgaagtgcga ctcgccgact gctttcgcaa cggccgcgag gagcacctgc
     1141 tgcccggcca gggggacttc gatttcgccg gattgttcca ggtgttgagc gcgcgtggct
     1201 accgaggtca ttacaccaac gcgtttgggt cgttggatga tatgttattg gcccgcaata
     1261 aattcgccga catgctgtaa ccggcggacc tcatccgagg agctcacgcc gccggccggt
     1321 caaccgaaag ccactccagc agtttgcgcg tcagggcagc caacgtcaga ggcttggaca
     1381 gctggtcgtt catgccggcc gccaggcatt cctcccggct gccgtccatc gcatgcgcgg
     1441 tcagcgccac gataggggta aagcgtccca acatcgcctc cacatgtcgg atcgcccgag
     1501 tggcctgata cccgtccatt tccggcattt gacaatccat cagcacgagg tcgtattcgc
     1561 cgccgtcgcg ataggccgcc acggcatgga tgccattgac cgcggtccgc acctcgcagc
     1621 ccagtgtttc gagcaacgcc tgggtgacac ggagatttgc cgggttgtcc tcaaccaaca
     1681 gaatgcgcac cgaggcgcgg ccggcctcgc gcaacacctc ctgaaattcg aggcccgcgg
     1741 cggtcacgat ccgctgcgga tacggcatcg gcggcacggc taccggcggg ggtgccggtg
     1801 gcgcggtcag acgttgcggt ggtctgggct ggaccgtttc cactggtgtc tcaagtgccg
     1861 gttccatcgt cgctttctcg aacggcagcg ccagccagaa cgtcgatccg acgccgatca
     1921 tgctttgcac gccgaactcg ccgttcatcc gctggcaaag ttccttcacg atcgccaggc
     1981 caagcccgct gcccccgtac cggcgcgtcg tcgatccgtc gccctgggtg aacgcctcaa
     2041 agattttttg ttgcatttcc ggtgcgatgc cggtgccggt atcgccaacc tcaaatctga
     2101 tctggatcgt gctcggcgtt tcgtcgaccg cggacacccg cagtgcaatc ccgcccgacg
     2161 cggtgaattt gatcgcgttg ctcaacagat tgcccaacat ctgctcgatg cgttgcgcgt
     2221 cgccgatcaa cccggtctgc atcgcctcgg gcaacgacac cgccatggtc aggcctttgg
     2281 ccgcggcctg ttcgccgtac tgctcccgca gcccggtgat caacccatcg agccggaagg
     2341 gctccggttt gaggccgatt ttgccgacct ccatctccga caggtcgagc acgtcgccca
     2401 tcattcgcaa caacgactgt gccgaccggc ctgcctggtc gatataattc tgctgcgtgg
     2461 tcgaggcgcc cgatagccgc agcaattcca gcatgccgac gaccccgttc agcggcgtgc
     2521 gcaattcgtg gctcatgttg gccagaaact gcgacctgac tcggttggag gtttccgcct
     2581 gccgcagcgc ctgcaaggtc tccgaggcct tacgccgcag atcggccagc atcgtgttga
     2641 acgcgcggcc cagactgcgg agttccgacg gcgcccagag gccgaaggtt ggggcggaca
     2701 cctcctcatt gccgttcatg accgcctctg ctgtggcggc aatttgccgg accggtctgg
     2761 ccagcagcag tgccaccaaa tagctgatca acgccgccgc cgcgaaggac gccacggcga
     2821 tcaccacggc catctgattg atcacgtcgg cgcggtgccg caattcgctg accggttgcg
     2881 gcaccatcac gccccagccg gtctccggca ccacggcgta accggcgatc atcatgccgt
     2941 tggcggacgc cgagtagaac tgcccgacgc cggtctcgcc acgcatcatc gcggcgacca
     3001 ccgggacgtt ggagatatcc gtcgacgccg ccacacgctc cttcgaggga tccgcgatga
     3061 cctgaccgct gccgtcggtg atgacggcgt ggcctcggtc gccgaacgaa atgccctgct
     3121 gcaacgatac caggtatcgc gtgctgacga tgccgacgcc cagtttgcgg tcgggcaggg
     3181 ccttgacgag gtagaacacc ggccgattgg cagcatcgtg atacagcttc gacagcaccg
     3241 gttcatccgg catgtcgtca gccagcgcgc gcagcagttt gaagcgcacc gggtcgggcg
     3301 gattttgcgt ctcgatgtcg tccgtcaggc caggcagcac gctggctacc gaaccgtccg
     3361 ggttgaggat gaagacgtga atgacgtcca gcgcacccag cagattgatc aggcccgcgc
     3421 caggctggtt catcgacccc ggggtgaatg ccagcggaaa ggtcgccttc agatccttga
     3481 cgtagcgcga catggtagag gtcaggttgc gggcgaccag caagtgccgc tcccgcaccg
     3541 agtccagttc gttctggaag gcagattggc tttcccagat cgccagcacc gcgatcggta
     3601 ccgccgccac cagggtgaat gccacgaaca gcaactgatg cattttgggc caggtccaga
     3661 gccgcgagcg cggttccaca gcgtcctgca ccgtcgtgcc tgctgctggg gcggcgctgt
     3721 cgggtggcgc ctgggttgcg ccggcaattc cgtccatcaa tgaaggtccc ggttcagcct
     3781 gaaggcaggc ccaaagagtc ggatacaggg gtcaggtatg gtagttctcg gcaggatact
     3841 ggtaaccggg agaaaaagca gccccatcag ggtgtcattc gtatcacctg aaggtaaact
     3901 acggcgcacc tgcccacgcc ggaggtgtcg catacccggg tatggaccac gggttctggg
     3961 cgaacggaaa ccggcatagg atcgcgccat gttgatgttg ccattcgtct tcccgggcta
     4021 tttgttcggc tcgatcccgt tcggtctgtt gctgactcgg atggccggac tgggcgacat
     4081 ccgcgccatc ggttcgggca atattggtgc aaccaatgta ttgcggaccg ggcacaaagg
     4141 cctcgctgtg gcgaccttgt tgctcgatgc cgccaaaggg gcttttgcgg ttggcgtttt
     4201 ccgttatctg ggcccgccgg acgccgcact ttgggcggga ctgggcgccg tcgtcggcca
     4261 cctgttcccg gtgtggctgg cgttcaaggg cggcaaaggc attgccacca gtgctggcgt
     4321 gctgctggcg attgcatggc cggtggcttt ggctgccggc attgtgtggt tgatcgtggc
     4381 ggtgactgcc cggatgtcct cgctggcgtc tctggcggca tgcgtcgcgg cgccggtcgc
     4441 tgcggtgttt gtcgccgaca gtaaggttgc ctggctgacg ttggcgatcg cggccatggt
     4501 gatcgcgcgg catcatgaaa acatccggcg cctgttggcc ggcaccgagc cgaggatcgg
     4561 acagcgcggg tcgaatgcgg gttcagcctg agccgcgctg taggaagctg ccgaatttta
     4621 tcgccgcacg atcgtgccgc atcggtcaca aaatttcgtt ttggtgccgg gttcgtacag
     4681 atgttgcaaa gttcgggtgg ccggactccg ttttggcctg tgctgcctta cgaaatcgca
     4741 tttctgcccg acgcgtttcg cgtgactgca tttccattat ttgtttgacg gaccaaaacc
     4801 cgccggttat gaacgcggca tgatcaacaa atccacccgc ttctggcatt gctcgcaact
     4861 cggtttcgtc accggggcgc ggccgtatgc gcacggaggg gctgtattca ggtaatttcc
     4921 gtcaacatcg gcggacttgc cgacagcccc tcggaacttc cgaggggttt tttgttgtct
     4981 gacgtgcttt gggtcctgcg ggcccgtgtt ctttgaagcg gtgaatcggc agtagcataa
     5041 cggggcgcgg cgccgggtcg cggtcaatcc ttgcaagatt gggcagcaga gttcgacact
     5101 ctggcgctcc accaatgcaa tcaatacccg cgctcgcccg attgcgagcc gcggtgcttt
     5161 ttcatgccca atcggttgcg ttcagtttcg cgccggggcg gtgacattta agaatccacg
     5221 atgcacattc cggctgtgca taaccgccgg atttcgatcg tcgtatcact ttatatataa
     5281 tagcgggaag ctcagggtgg ccgccgtggt tcatacccac tggcatgacg gttcgattcc
     5341 gtctcccgct acctaagtcc ggttagctga tgtggtcata gcggcggttt gaagaaccgt
     5401 tgaacgtcgt tcgattcgac ggccgg
//
LOCUS       DATAVD010000543         2975 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3214807, whole genome shotgun sequence.
ACCESSION   DATAVD010000543 DATAVD010000000
VERSION     DATAVD010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2975
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3214807"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            223..483
                     /locus_tag="VHX39_10070"
     CDS             223..483
                     /locus_tag="VHX39_10070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3126 family protein"
                     /protein_id="HEX3991503.1"
                     /translation="MTPLEIERLQTYLRKLFGSERIKIVPPMRRGLSVEVAVNDETIG
                     TVHKDVDDGETSYSLTLTVLEEDMPAPRPAGVKPAIGSPTRR"
     gene            complement(792..1976)
                     /locus_tag="VHX39_10075"
     CDS             complement(792..1976)
                     /locus_tag="VHX39_10075"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3991504.1"
                     /translation="MTKLRHGAFLPPFHPMNENPSACIDRDLELMQWLDRLGFDEAWI
                     GEHHSAGWELISSPELFIAVAAERTKSIRFGTGVISLPYHNPLMTANRIIQLDHHTRG
                     RVMFGAGPGLLASDALMLGIDPNTQRDRMAEALDVILRLFKGEIVTEKTDWYNLVGAR
                     AHILPYTSPHPEVAVVSAVTPSGGRLAGKYDLSMICVAATNPFGYDALAANWKIANDI
                     AEQNGRKMDASRLRLVGPMHIAETRAQAFENVKFGFEPYLNYLNNNQPRFIVPAGEDP
                     ATWFVENKFGVIGTPDDAIALIERLYEKQGDFGVFLQQVHNWADFEQTKRSYELYQRY
                     VMPHFSRDNRPRIESFDWCSDHREELSEKRSTAARAMFEKHEAEQKAAVQARPTKGRE
                     AW"
     gene            2282..2743
                     /locus_tag="VHX39_10080"
     CDS             2282..2743
                     /locus_tag="VHX39_10080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991505.1"
                     /translation="MQRRSFGTATGGIVLAAAGIAAARGEQPASHKMAFHVGSADPVM
                     MHVALHNIAAAAEYYSEKHETVAIELVANGPGYTMLRADTSPVKAEVAATKKKYPFIV
                     FSACQNSRKAVAAAEHKAVQDILELPEATDVAAGVVRLSELQEQHYSYIRV"
BASE COUNT          526 a          848 c         1038 g          563 t
ORIGIN      
        1 gcggctgctg accaataatc cggacaagct ggatgcgatg gtcgcgtgcg gcatcgaggt
       61 gaccgggcgg gagccgcatc tgttcgcccc caacggcgtt aacgatgaat atttggcaac
      121 caaggccgct cggtttggcc atatgctgga ttgaggaccg cgccctggac caaggaccgg
      181 actcgagggt aaacggctca gctcctttca tatgagatcc tcatgacacc gttggaaatc
      241 gaacgtcttc aaacctatct gcgcaagctg ttcggcagcg agcggatcaa gatcgtgccg
      301 ccgatgcgcc ggggtctgtc ggtcgaggtg gcggtcaatg atgagacgat cggcaccgtc
      361 cataaggatg tcgatgacgg cgagacgtcc tactccctga cgctcaccgt cctggaggaa
      421 gatatgccgg cgccgcggcc ggccggcgtg aagccggcga tcgggtcgcc gacgcggcgc
      481 tagagggtgg tcgcctgaga cggaaggcgt ggatgccgac ctgcgtcggc aggacgattg
      541 cctggggcgg aaggcgtgga tgccgacctg cgtcggcatg acgatcacct ggggcggaag
      601 gcgtggatgc cgacctccgt cggcatgacg gtcgcctggg gcggaaggcg tggatgccga
      661 cctccgtcgg catgacgatc gcctgagacg gaaggcgtgg atgccgacct gcgtcggcat
      721 gacgggaacg gctgatcggc gggcccccgt tggcacaggt tgttggtatt acgcgggaaa
      781 actttatctg atcaccaggc ttcacgtcct ttcgttggac gtgcctggac cgctgccttc
      841 tgttctgctt catgtttttc gaacatcgcg cgggcggcgg tggaacgctt ctcggataat
      901 tcctcgcggt ggtccgaaca ccagtcgaac gactcgatgc gcgggcggtt gtcgcgggag
      961 aaatgcggca tcacgtagcg ctggtagagt tcgtacgagc gtttggtttg ctcgaaatcc
     1021 gcccagttgt ggacctgttg caggaacacg ccgaaatcgc cctgcttttc gtacaggcgc
     1081 tcgatcaggg cgatcgcgtc gtcgggggtg ccgatgacac cgaacttgtt ctccacgaac
     1141 cacgtcgccg ggtcctcgcc ggccgggacg atgaagcggg gctggttgtt gttgaggtag
     1201 ttcaggtagg gctcgaagcc gaatttgacg ttctcgaacg cctgggcgcg cgtttcggcg
     1261 atgtgcatgg ggccaacgag gcgcaggcgg gatgcatcca tcttgcggcc gttctgttcg
     1321 gcgatgtcgt tggcgatttt ccagttggcc gccagcgcgt cgtagccaaa cgggttggtg
     1381 gcggcgacgc agatcatgct gaggtcgtat tttcccgcca gacggccgcc ggagggggtg
     1441 acggcgctga ccacggcgac ctcggggtgc gggctggtgt agggcaggat gtgggcgcgg
     1501 gcgccgacca gattgtacca gtcggtcttt tcggtaacga tttcgccctt gaacaggcgc
     1561 aggatgacgt cgagcgcctc ggccatgcgg tcgcgctggg tgttggggtc gatgccgagc
     1621 atcagggcgt cggaggcgag aaggccgggg ccggcaccga acatgacccg gccgcgggta
     1681 tggtgatcga gctggataat gcggttcgcg gtcatcagcg ggttgtggta cggcagcgag
     1741 atgacgccgg tgccgaagcg gatcgatttg gtgcgttcgg cggcaaccgc gatgaacagt
     1801 tcgggggaac tgatcagctc ccagccggcg gagtggtgct caccgatcca ggcttcgtca
     1861 aaaccaagcc ggtcgagcca ttgcatgagt tcgaggtcgc ggtcgatgca ggccgacggg
     1921 ttctcgttca tcggatggaa cggcggcagg aaggcgccgt ggcgcagctt ggtcatgttc
     1981 gcagtctccc ggacgtgtct ggcggcgatg gtatgggcga gggtggcgtt cggctagtat
     2041 cgcgcatcag agaagcgcga tcgttgcagg tttgcctggt tgcaggtttg tctgagtgac
     2101 cgattcacac gggaaatcgc ggtcactgcg tgagtcgcgc tttaccgcga tcgggcactg
     2161 gagcggccgg cctcggccct gaccgaatgg cggaccgcgg tgccgaacga aacttctgtc
     2221 gcaggctggg gggcatcgct atggtgggtg tgctgcttgt caatgtcaga aagtctttgc
     2281 catgcaacgc cgatcctttg gcaccgccac cggcggcatc gtgctcgcgg ccgccggcat
     2341 tgctgccgcc cgtggggagc aaccggccag tcataagatg gcctttcacg ttggcagcgc
     2401 cgacccggtg atgatgcacg tcgccctgca caacatcgcc gccgctgccg agtactacag
     2461 cgaaaagcac gagaccgtcg caatcgaatt ggtggcgaac gggcctggct acacgatgct
     2521 gcgcgccgac acgtcgccgg tgaaggcgga ggtcgctgcg acgaagaaaa agtatccctt
     2581 cattgtcttc tccgcctgcc agaacagccg caaggcggtg gccgcggcgg aacacaaggc
     2641 cgttcaggac atactggagt tgcccgaagc aaccgatgtc gcggccggcg tggtgcggct
     2701 gagcgaactg caggaacagc actacagcta tatcagggtc tagttttcag tggcctgctg
     2761 gtcccagaag cccgccgcaa gatgcgacga acttcagggg caggacacta gtcggtactc
     2821 gacgatcccg ccaaaagccc ctgaccgcgt agcacggtca ccgttcgcag cacacgcccg
     2881 tccagtcgca ccgatgtgcc gggtagtacc tcgactgtct ggaaccatgg cttggtctcg
     2941 gccaccgcct tgtccgcggg gccgataacc aggac
//
LOCUS       DATAVD010000544         3431 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3214972, whole genome shotgun sequence.
ACCESSION   DATAVD010000544 DATAVD010000000
VERSION     DATAVD010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3431
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3214972"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /gene="hisG"
                     /locus_tag="VHX39_10085"
     CDS             <1..244
                     /gene="hisG"
                     /locus_tag="VHX39_10085"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462750.1"
                     /note="short form of enzyme; requires HisZ for function;
                     catalyzes the formation of N'-5'-phosphoribosyl-ATP from
                     phosphoribosyl pyrophosphate; crucial role in histidine
                     biosynthesis; forms heteromultimer of HisG and HisZ;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEX3991506.1"
                     /translation="AEVVHLNGAMELAPRLGLSRLIVDLVQTGATLRANGLVETEVIA
                     QVTSRLIVNRTALKTRPEVIGGFIARLRAALDNTVK"
     gene            complement(469..2460)
                     /locus_tag="VHX39_10090"
     CDS             complement(469..2460)
                     /locus_tag="VHX39_10090"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3991507.1"
                     /translation="MIGRWHGIAARLYGLVSLVVLSLALLIAIAVGQSGRMGIAGSGL
                     WRGVQGVSQADRIEMLWETGRGLVARAPAELDLARQQQFHATFERTIGAIHAGLAQLG
                     QDGDPALRALVAAADASVAAASQSANEVFRLAGNFVQDEAVAVLDGRFATVDTEIVQR
                     LGALTAYQKDAAAKDLNQMNSARRAMEWMIGVVGVLAVVLVGTIGTLLSRSISTRVEH
                     LTTVMSGLAGGELTIAIPCTADRDEIGHMARAVEVFKQNAATTRRLTAEQASTRAAED
                     RRQAAIGRLTEDFGTSASGVMTALAASTGSMIASAEEMAVATDGVHRHASGTAERAAQ
                     SSRDLTSVAAAIEQMTTSVDEITRQIASAASSAHSAGERAALNNDMIRALGAAAERIG
                     NAIQLIDGIAAQTNLLALNATIEAARAGDAGRGFAVVAGEVKALAQQTASVTAEIGAQ
                     ISAIRTAVDGAIQAMSEIATIIGGIDAATATIADAAAQQSATTREIGANVQAVSIATN
                     LAAQAMTQVVDAATRATAITRVVMGGVAGIGNEANSLHTEIDQFLVAVRADNGEHRAH
                     DRVPGNGAVVTLFAPGLPAMLAPLRDLSPAGAAVEGEWQLPAGHMVELELPDGGGRVP
                     GRVVRCSAGVLAMIFRRDEVTDGLVYPAIDALGGRSLPT"
     gene            complement(2500..3240)
                     /locus_tag="VHX39_10095"
     CDS             complement(2500..3240)
                     /locus_tag="VHX39_10095"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX3991508.1"
                     /translation="MLRFIVIAVLALGCFAAHAATIAIHGSTTVAGAVLTPHKADIER
                     ASGVTLEIVANGSGRGLADLAAGKADMAMISAPLEAEVAASNAKTPGALDPTKLIAHP
                     IGAANVAFVVHPSNPVTTLTLAQIADILSGKITKWSELGGADQPIVVVAAMRGDGVRS
                     SVESHLLHGASLLPQTRELPNAPQIVHVVAQLPAAFGITAADGVGDSVHAIKTDAVIG
                     QPLILVTLGEATADATKVIDAAKAVADQ"
BASE COUNT          590 a         1124 c         1092 g          625 t
ORIGIN      
        1 ggccgaggtt gtgcacctga atggcgcaat ggagctcgcg ccgcgcctgg gcctgtcgcg
       61 gctcattgtc gatctggtgc aaaccggagc cacgctgcgg gcaaacggtc tggtagagac
      121 cgaggtgatc gctcaggtaa ccagtcggct gatcgtgaac cggaccgcac tgaagacccg
      181 gccggaggtg atcggcgggt tcattgcgcg gttgcgggcg gcgctggaca atactgtgaa
      241 gtaatcgttt ggttgtcgta tctatatcgt aaccaatgcg gtaggcccgt gcctgtagcg
      301 tcgtcagatt aatctccgag gacgctgagt aaggggagga cacggaggcg tcgcagccta
      361 cgtttctccg cgccactcga aaacctccgc gtcctccgag agcaatggaa cgcctggaaa
      421 cgcacaggcc tctgacaata aaataccggt ccacgaggcc ggcactgctc aggttggcaa
      481 gctgcggcca ccaagggcat cgatggcggg gtatacaagc ccgtccgtca cctcgtctcg
      541 gcggaagatc attgccaaca cgccggcact gcagcgcacc acccgtccag gcacgcgccc
      601 accaccatcc ggcagttcga gttcgaccat atggcccgcc ggcagttgcc actcgccttc
      661 cacggcagcc cctgccggcg agagatcacg cagcggagcc agcatcgcag gcagtcccgg
      721 cgcaaataac gtgaccactg caccattgcc gggaacccga tcatgcgccc ggtgctcgcc
      781 attatcggcc cgcactgcaa ccagaaactg atcgatttct gtgtgcaacg aatttgcttc
      841 gttgccgatc ccggctacgc cgcccatgac aacgcgggtg atcgcggtgg cccgcgtggc
      901 tgcgtcaacc acctgcgtca tggcctgagc cgccaggttg gtggcaatcg aaaccgcctg
      961 cacgttggca ccaatctccc ttgtggtcgc actttgctgt gctgccgcgt cggcgatcgt
     1021 tgcggtagcc gcatcaattc cgccgatgat tgttgcgatc tcgctcattg cctggatcgc
     1081 gccgtcgacc gccgtccgga tcgcactgat ttgcgccccg atctcggcgg tgacactggc
     1141 ggtttgctgc gccagagctt tgacctcgcc ggcgaccacg gcaaacccgc ggcccgcgtc
     1201 gccggcacgc gctgcctcga tcgtggcatt cagcgccagc aggttggtct gcgccgctat
     1261 gccgtcgatc aactggatgg cattgccgat ccgctcggcc gccgcgccaa gcgcccggat
     1321 catgtcgttg ttcaaggcag cccgctcgcc ggcggaatga gcggaagacg ctgccgaggc
     1381 aatctgccgg gtgatctcat ccacgctcgt cgtcatctgt tcgatcgccg ccgcaaccga
     1441 tgtgaggtcg cgcgacgact gcgccgcacg ctccgccgtg ccggaggcgt ggcggtgcac
     1501 gccatcggtt gccaccgcca tttcttcggc cgatgcgatc atgctaccgg tggaggcagc
     1561 caaagcggtc atgacgccgg aggccgaagt gccgaaatcc tcagtcagac gtccgattgc
     1621 cgcctgtcgc cggtcctcgg cggcgcgtgt cgaggcctgt tccgcggtca ggcgccgggt
     1681 cgtggcggca ttctgcttaa acacctcgac cgcgcgcgcc atgtggccga tctcgtcgcg
     1741 atccgctgtg cacggaatgg cgatcgtcag ttcgccgccg gcgagaccgc tcatcaccgt
     1801 ggtcagatgt tcgacgcggg tggaaatgct acgcgacagc agcgtgccga tggtgccgac
     1861 cagcactaca gcgagcacgc ccaccacgcc gatcatccac tccatcgcgc gtcgcgcgct
     1921 attcatttgg ttcaggtcct tggcggcggc gtccttctgg tatgccgtca gcgcgccaag
     1981 ccgttggacg atctcggtgt ccaccgtcgc aaagcgtccg tccaggacgg cgaccgcttc
     2041 atcctggacg aaatttcccg ccagacggaa tacttcgttg gcggactgtg acgcggcagc
     2101 gacactggca tccgccgcgg cgaccaacgc gcgcaacgcc ggatcgccgt cctggcccag
     2161 ttgtgcgagt ccggcgtgga tggcgccgat ggtgcgttcg aacgtggcat ggaactgttg
     2221 ttgccgtgcc agatcgagtt ctgcgggcgc tcgggcgacc aggccacgac cggtttccca
     2281 cagcatctca atccggtcgg cctggctgac gccttgcaca ccacgccaaa gtcccgatcc
     2341 agcgatgccc atacgcccgg attgaccgac cgcgatcgcg atcagcagcg ccagcgacag
     2401 cacgacgagg ctcaccaacc catagagccg cgccgcgatc ccgtgccacc ggccaatcat
     2461 gatccagccc tcatttggtt ccgaccggtg atggccgggt tactggtcgg cgaccgcttt
     2521 cgccgcgtcg atgaccttgg tcgcgtccgc ggtcgcctca cccagagtga ccaggatcaa
     2581 tggttggcca atgaccgcat cggttttgat ggcgtgcacg ctgtctccca cgccgtcggc
     2641 agcggtgatg ccgaatgccg ccggcaattg cgccaccacg tgaacgattt gcggcgcatt
     2701 cggcagttcc cgtgtctgcg gcagcagcga tgcgccgtgc aacagatggg attcaacgct
     2761 ggagcggacg ccgtcgccgc gcatggcagc gaccacgacg atcggctggt cggcgccgcc
     2821 gagttcgctc catttggtga tcttgccgga cagaatgtcg gcgatctgcg ccagggtcag
     2881 cgtcgtgacc gggtttgaag gatggaccac gaacgccaca ttcgcggcgc cgatcgggtg
     2941 ggcaatcagt ttggttggat cgagggcacc gggggttttg gcattggaag ctgcgacctc
     3001 tgcctccagc ggggcggaaa tcatcgccat gtcggctttg ccggcggcga gatcggcaag
     3061 tccgcggccc gagccgttag cgacaatctc cagagtgaca ccggatgctc gctcgatatc
     3121 cgccttatgc ggtgtcagaa cagcgccggc gacggtggtt gagccatgga tggcaatcgt
     3181 cgcggcatgc gcggcaaagc aacccagagc gagcacggcg atgacgatga agcggagcat
     3241 gggtcgtctc ctgcagcagt actgggcgga ttccactggg cggttatccg gcaaatgact
     3301 taaggagcac ttaacgtcgg atccggccgt gcgctctgtt ggtgttgtga gcggtcggtt
     3361 tacctctgcc gcaaacgccg ttacgcgtgg gccgccgcgc gtgcctcccg agcgcggcct
     3421 cgcaactgaa g
//
LOCUS       DATAVD010000545         2615 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2842601, whole genome shotgun sequence.
ACCESSION   DATAVD010000545 DATAVD010000000
VERSION     DATAVD010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2615
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2842601"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..408
                     /locus_tag="VHX39_10100"
     CDS             <1..408
                     /locus_tag="VHX39_10100"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HEX3991509.1"
                     /translation="SINPALKAIPGEPMFPGRPDKFLGTDLDQVLRGHGIKTVITTGT
                     FTNGAVLYTASEAAFRGYGVLVPIDGISGLTPYADQMTVWQLLNGPRLGGDTVKLTTT
                     NAIRFVGSTQDPAPAAPPPGESHKEFSRVDAGR"
     gene            609..944
                     /locus_tag="VHX39_10105"
     CDS             609..944
                     /locus_tag="VHX39_10105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991510.1"
                     /translation="MKWRVVLEMVGPDGIVGLHEIGGRATVAEYTPRLIGLTLEEGKD
                     LLTMLQVHLVQAQAADHCRHQRRCLRCGALRPLNIGGVQTAGRGWRDNGSRPHDGAST
                     QSDQDQGGE"
     gene            1897..2556
                     /locus_tag="VHX39_10110"
     CDS             1897..2556
                     /locus_tag="VHX39_10110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991511.1"
                     /translation="MERIRDLLHWTRHRESAGSKPRNALFTASLSLAFALASVCLHDA
                     ITAFVSGHGVEHPAAHSGLEAAIMLVIEWAIVPLAITLAWLSARRRWLAVPMGVIGGA
                     SPCLAGWLFAWSAQAVITTAIPCLLILGFGYRQARKEPRQRVFARCAHSVAAVAAIWF
                     AIVLLLDAIFAFYHIDQFELYSPSDFWVDVRFYFGWTLGLMLAPSPYDRTADMIAEQV
                     D"
BASE COUNT          475 a          771 c          827 g          542 t
ORIGIN      
        1 agtatcaatc ccgcgctgaa ggcgatcccc ggtgaaccca tgtttcccgg ccggccggac
       61 aagtttcttg gcaccgacct cgaccaggtt ctaaggggac acggcatcaa gacagtgatc
      121 acgacgggca cgttcacgaa cggtgcggtc ctctacaccg ccagcgaggc ggccttccgg
      181 ggctacggcg tgctggtgcc gatcgatggc atatcgggac tgacgccata cgccgatcag
      241 atgacggtat ggcagctcct aaacggccca cgtctcggcg gagacacggt caaactgacg
      301 acgacgaatg ccatccgctt tgtgggctct acgcaagatc cggcgcccgc agccccaccc
      361 ccaggcgaat cgcataagga attttctcgg gtagacgcgg gtcggtagcg tggattcttg
      421 ttcgtagctc ttttccgggt tccgtcaggc tcgcgccagc gtgtgttggg agcggataag
      481 ttgtcggtgt tttgaagcgc gtgagttgtc cgccttgttc gcagtctgtt caggagactg
      541 cggagagacc gttcagaatg tgggggggtg ctataggacc gcccgatcgt tatagctgga
      601 agctcgggat gaagtggcgg gtcgtgttgg agatggtcgg accggatggg atcgttggcc
      661 ttcatgagat cggcggtcgt gcgacggtgg ccgaatatac gccgcggttg atcgggctga
      721 cgctggagga gggcaaggat ctgcttacta tgttgcaggt ccatctcgtc caagcacagg
      781 cggcggatca ttgccgccac cagcgacgct gcctgcgctg cggcgcgctg cggcccctca
      841 atataggtgg cgtgcagact gccggccggg gctggcgcga caacggctcg cgcccgcatg
      901 acggtgcgag cacccaaagt gatcaggatc aaggcggaga gtaggcgaat agagataacc
      961 cagggaagaa ggaccgccga cgccgcgcca gcgccagtga tcgcagccgt cgcgacgatg
     1021 ccgtgagccg ttgcggcgcc gaagcgtgcg accagcccgt gacgacagcc atgatcgagg
     1081 gctttttgaa cacagataag ggaaacgggc ccgaaggggg ctgctatcga caaaccgatt
     1141 gcggcaccgg tcaacacgga agctggcatt tgggttcctc gcgcaatgat tgcggtgagg
     1201 agacctgggc cgcgcttcat cgattctggg tactaggcag ttgccaatac accgttccag
     1261 cgagcccatg ccctgccatt ccggccagta ttccgggtaa ccgttgggat gggcctgagg
     1321 gatgatgctt ccgcccagac ggtgcccggt cacgtcatgg cattggctaa acgataggtt
     1381 caactgcctt tgacgctcag tgaacagcgc cttcccggcc tcaaaggatg accgagcggg
     1441 accgtcgacc gagacgctca caacaacagg ccggacagcg ccgcggccgc gcctaattcg
     1501 cccgggaaaa agttggttca atccttcaat gtcgcttctc tcgatagcaa ggtgcttgcc
     1561 ggtgacgatg ccttccacgg atgggacgtc agccgtcgca atcagtcggc acgcaataca
     1621 gtacttgtgt cgcgacagcg ctgccgatac tccttcagcg tcatgagatg gcgcagcatg
     1681 tccccgccgg ctctacaatc gcctcggccc cgatttgcac aagtggtgtc cacctgcact
     1741 tcggccatca cgtcatcgtt atggatcgcg atttgcgccg cggcgccaga atttatttgg
     1801 cagggcctgc ggatcgcact gaaggacccc acttgggcag atcttttctc agctttgctg
     1861 atcggactca ttcttgcttt tttcgttgag cccgtgatgg aacgcatccg cgatctgctg
     1921 cactggacgc gtcatcggga gtcggccgga agcaagccgc gcaacgcatt gttcaccgca
     1981 agcctgagcc ttgcgttcgc gctcgcatcg gtctgtctcc acgacgccat caccgccttc
     2041 gtgtccgggc acggcgtcga acacccggcg gcccattccg ggctggaggc cgcgatcatg
     2101 ttggtgatcg aatgggccat cgtgccgctc gcaataacgc tcgcttggct aagtgcccgg
     2161 cggcgttggc ttgcagtgcc gatgggggtc atcggaggcg cctcgccgtg ccttgccgga
     2221 tggctgtttg cctggtcagc gcaggccgtg atcaccaccg ctattccgtg cttgctgatt
     2281 ctcggcttcg gatatcgcca ggcaagaaag gaacctcgtc agcgtgtctt cgcacgatgt
     2341 gcacacagcg ttgcggccgt ggccgcgatc tggtttgcaa ttgtgctgct gctcgatgcg
     2401 attttcgctt tctatcacat cgatcagttc gaattgtaca gtccatccga tttttgggtg
     2461 gatgtgcggt tctactttgg ctggacgctg ggattgatgc tggcgccttc gccgtatgac
     2521 cgaacggcgg acatgatcgc ggagcaggtt gactagctag gcctcgttac ggcgggtacg
     2581 cgcccatgct cctcgacatc ccagcccgtg cgctt
//
LOCUS       DATAVD010000546         3321 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1166917, whole genome shotgun sequence.
ACCESSION   DATAVD010000546 DATAVD010000000
VERSION     DATAVD010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3321
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1166917"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..719
                     /gene="lexA"
                     /locus_tag="VHX39_10115"
     CDS             <1..719
                     /gene="lexA"
                     /locus_tag="VHX39_10115"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HEX3991512.1"
                     /translation="QYELLIYIDSYLKQKGYSPSFEEMKAALELKSKSGIHRLISALE
                     ERNYLGRRHHRARALEVLRMPDNMMPRQETVLELEEDDDDDSPRFTPNVIRGDFTGRL
                     QAVRAASDAAAVKLPLYGRIAAGLPIEALHDSAEMIDVPASLLGPGDHYALEVSGDSM
                     VDAGILDGDTVLIRKGEVAENGQIVVALVDELEVTLKRLRRRGNSTALEPCNPAYKPQ
                     ILPADKVKVQGRLVGLLRRY"
     gene            complement(811..3081)
                     /locus_tag="VHX39_10120"
     CDS             complement(811..3081)
                     /locus_tag="VHX39_10120"
                     /inference="COORDINATES: protein motif:HMM:NF015714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HEX3991513.1"
                     /translation="MLQAVGLWRVLAAQWNGVAHRLAISRIGHLVTTLAEAERGRFAL
                     WLPVFMATGVLLYYQLRVEPPDWIGAKFAAGAFAAALAVPNRQVLRAIGFSVGFAALG
                     FASAQYATLRLPPIEADLPAKAVLATGTVRSVEILSYARRMTLSGVTLSDGDRPPAAK
                     SRRRQTQAQYDPQPQDADHIRLVRQVRIRLATGDNAPIETGDTVRVRAMARPPLPPAL
                     PGGWDTQRDAFFAGLGASGYALAPVEIIAHGAPHGLASRVQSLRETIAARITAAIPGA
                     AGEVSITLLTGASRGIPEADHAAFRASGLAHLLAVAGLHIGIVMAFALGAARTMLALS
                     ERASLFWPAKQLAVVFALCVAGGYMVLTGAHVPIVRSFAMACLLTLAILAGRQPISVR
                     GLGLAGIALMLIAPYEVPGVSFQMSFSAVLALISGYETLRPWLRRLYGKSLAKRLLSY
                     GIALALTSTLAGTASMPYGAYHFGHVQIYYILSNVVAVPVTALWVMPAGLIALLLMPF
                     GLDWIALIPMGWGAGLLIDIARFTAALPNATVGVPHMPEWGLIVLSIGLAWLGLWRSW
                     IRLLGIGAIIAGIASPAFDRPPDIFLSSDAGLIGFRTEHGVFLQQTRSGSDFTRDAWL
                     TRWDVAAAVPLPGEGTAAAGALSCEPDACLFQPRDGVMPALLVRGPAKPTGCKAASVV
                     VSAEPARSVCAWPSPRPVDRFTVWRDGAVAIWLEPHGARVLTDREYRGARPWVIPPPK
                     PRARPVSNLPIAPLDR"
BASE COUNT          670 a         1060 c         1079 g          512 t
ORIGIN      
        1 aacagtacga gttgctgatc tacatcgact catatctgaa acaaaagggt tactcgccca
       61 gtttcgagga gatgaaggcg gcgctggagt tgaagtcgaa gtctggcatt caccggctga
      121 tttcagcgtt ggaggagcgt aattatctcg ggcggcgtca ccaccgcgcc cgcgcgctcg
      181 aagtgctgcg tatgccggac aacatgatgc ccaggcagga aaccgttctg gaactggaag
      241 aagacgacga cgacgattcg ccgcggttca cgccgaacgt cattcgcggc gatttcaccg
      301 gccgtcttca ggcggtccgt gctgcgagcg atgccgcggc ggtgaaactg ccgctgtatg
      361 gaaggatcgc cgccggcctg ccgatcgagg cactgcacga ttcggccgag atgatcgatg
      421 ttcccgcatc cctgcttggt cctggcgatc attacgcatt ggaagtgtcg ggggattcca
      481 tggtggatgc agggatcctc gatggcgaca cggtgctgat ccgcaagggc gaggtggcgg
      541 aaaacggcca gatcgtcgtt gctctggtcg acgaacttga ggtgacgctg aaacggctgc
      601 gccggcgcgg taactccacc gcgctggaac cttgcaatcc ggcgtacaag ccacaaatcc
      661 tgccggccga taaagtgaag gtgcagggac ggctggttgg attgttgcgg cgctattgaa
      721 cgataggacc atggcggctt tgattgaagc gttgcggact ggcgattgat ccggcgccat
      781 agcgttgcgg tggagcaatg aagcccgcgc tcaccgatcc agcggcgcga tcggcaaatt
      841 cgataccggc cgcgcccttg gtttcggtgg cggtataacc cagggacgcg cgccgcggta
      901 ctcgcgatcg gtcaatacgc gcgcaccatg cggttcgagc cagatcgcga ccgcaccatc
      961 cctccacacc gtgaaccggt cgaccggacg cggcgagggc cacgcgcaga ccgagcgcgc
     1021 cggctcggcc gacaccacga ccgatgctgc cttgcaacct gtgggctttg ccggaccgcg
     1081 caccagcagc gccggcatca ccccgtctcg gggctgaaac aaacaggcgt cgggctcaca
     1141 ggacagcgca cctgccgccg cggtgccctc gcctggaagc ggaacggcgg cagcgacatc
     1201 ccaacgcgtg agccaggcat cgcgggtgaa atccgaaccg ctgcgcgtct gctgcaaaaa
     1261 cacaccgtgt tcggtgcgga acccaatcaa tccggcatcc gaagaaagga aaatgtcggg
     1321 cgggcggtcg aatgccggag acgcaatccc ggcgatgatc gcgccgatcc ccaacagcct
     1381 gatccaggat cgccacaagc cgagccacgc gagaccaatc gacaacacga tcagtcccca
     1441 ttccggcata tgcggcaccc ccaccgtcgc attcggcaac gctgcggtga accgcgcaat
     1501 atcgatgagc agcccagcgc cccagcccat cgggatcaac gcaatccaat ccaggccgaa
     1561 cggcatcagc agcagcgcga tcaggccggc cggcataacc cagagcgcgg taaccggcac
     1621 ggcgacgacg ttggacagaa tgtaatagat ttgcacgtgg ccgaaatgat acgctccgta
     1681 cggcatggac gcggtgccgg cgagggtact ggtcagggcc agcgcaatgc catacgacag
     1741 cagccgtttc gcgagacttt tgccatacag gcggcgcagc cacggccgta acgtttcata
     1801 accggatatc aaggccagaa ccgcggaaaa actcatctgg aatgaaacgc ccggcacctc
     1861 gtacggcgca atcagcatca gagcgatccc ggcaaggcca aggccacgca ccgaaatggg
     1921 ttgccgtccg gcgaggatcg ccagagtcag caggcacgcc atcgcaaaac tgcgcacgat
     1981 cggcacatgc gctccggtca gcaccatgta gccgccggcc acgcacaacg cgaacactac
     2041 ggcaagttgc ttcgccggcc agaacaggct cgctcgttcc gacagcgcca gcatggtgcg
     2101 ggctgcgcca agcgcgaacg ccatcacgat gccgatatga agtcccgcga ccgccagcag
     2161 gtgcgcaagg ccggaggcgc ggaatgcggc atgatccgcc tcggggatgc cgcgggatgc
     2221 gccggtcagc agggttatcg aaacttcccc cgctgcaccg gggatcgcag cggtgatccg
     2281 tgcggcgatg gtttcgcgca acgattggac ccgcgacgcg agcccatgcg gggcgccgtg
     2341 cgcgatgatc tcgaccgggg ccagagcgta gcccgacgcg ccgaggccgg cgaagaaagc
     2401 gtcgcgctgg gtgtcccagc cgccggggag tgcgggtggc aaaggcggtc gcgccatggc
     2461 tcggacgcga accgtgtcgc cggtctcgat cggtgcattg tccccggtcg ccagccggat
     2521 ccggacctgt cgtactaacc ggatgtggtc cgcgtcctgc ggctgcgggt cgtactgggc
     2581 ctgggtctgc ctgcgtcgcg attttgcggc gggcggccgg tcgccgtcgc tgagggtcac
     2641 gccgctcagc gtcatccggc gagcgtacga caagatctcg accgagcgca ccgtgccagt
     2701 tgccagcacg gccttggccg gcagatccgc ttcgatcggc ggcagccgca gggtcgcgta
     2761 ttgcgccgag gcgaagccaa gggccgcaaa ccccacgcta aatccgatag cccggagcac
     2821 ctgccgattg gggacagcca gagccgcggc gaacgctccg gcggcaaatt tggcaccgat
     2881 ccaatcgggt ggttcgaccc gcagttggta atacagcagc acgccggtgg ccatgaacac
     2941 cggcagccaa agggcgaagc gtccccgctc ggcttcggcg agtgttgtga cgagatgacc
     3001 gatccgggaa atggcaaggc gatgggcaac gccgttccat tgggccgcga ggacgcgcca
     3061 cagccctaca gcttgcagca cgcgtctgcc cggtcgtgcg acccgctgcc cgacgctcca
     3121 ccggtagccc ggccggagga acagcgcgcg ggtggatccc atgccctgaa actagcggac
     3181 ccggcctcaa tatcgggtta atgaatgaag cctgtcatac aaaggcgaac tcttcatcgt
     3241 gctctgcgcc ggtggttctg gaaatactcg aacgttccta tcgggtcgag ggagcgcacc
     3301 ccatggtcaa tcctccgggt t
//
LOCUS       DATAVD010000547         2414 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2097110, whole genome shotgun sequence.
ACCESSION   DATAVD010000547 DATAVD010000000
VERSION     DATAVD010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2414
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2097110"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..335)
                     /locus_tag="VHX39_10125"
     CDS             complement(<1..335)
                     /locus_tag="VHX39_10125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991514.1"
                     /translation="MLIIDAQVHIWGSGKPSAHHRQTSVYTAEELIAEMDAAGVNGAV
                     LHPPSWDAHSNEMAVEAAVKYPDKFCALGWFALNDPSQRKRIETWKQQPGMLGLRWSL
                     TRDGQETWH"
     gene            459..1217
                     /gene="surE"
                     /locus_tag="VHX39_10130"
     CDS             459..1217
                     /gene="surE"
                     /locus_tag="VHX39_10130"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: protein motif:HMM:NF001490.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEX3991515.1"
                     /translation="MLTNDDGIDAPGMQVLEEIAAQIAREVWVVAPEHDQSGQSHAIS
                     LHHALRISERGERRFGVTGTPGDCAAIGLCHLMKDNPPQLVLSGVNRGLNLGMETVFS
                     GTVGGAMTAMMLGCPALALSQAFTDRNNVPWDTARSLGAETINKLLSVGWGKSAVLNI
                     NFPPIPAAEAGPMTLARQGEGAVAGMHVDTRIDPRGMSYHWLNFKRGDIQQGPESDYS
                     AMRAGKIVVTPLRYDRTDDDAYAELATHLPRYGQ"
     gene            complement(1398..2159)
                     /locus_tag="VHX39_10135"
     CDS             complement(1398..2159)
                     /locus_tag="VHX39_10135"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3991516.1"
                     /translation="MRFKGKIALITAAANGIGRASAAIMAAEGATVVCVDNHPERLGA
                     AVAALGKGAHGRLCDALDQGQVDAVVADVTREFGRIDILVNAVGGSTIIAKPSAVVEE
                     HSLDDWQRVIKFNLDGTFLFTHAVVPIMKRQNAGKIVNLASIAGRGMSIASGCAYAAA
                     KGGIIAFTRKLSFELGPFGININAIAPSLTLTERIRPHWNQRSPEAQAAQVEATPLRR
                     VAEASDQAKVICFLASSDADFVTGLTIDVTGGQSG"
     gene            complement(2176..>2414)
                     /locus_tag="VHX39_10140"
     CDS             complement(2176..>2414)
                     /locus_tag="VHX39_10140"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3991517.1"
                     /translation="RGFAEAADRIQELYLAHRKDEAIAAVPDEWVDMKSLVGPPARIR
                     ERFRAWEDSGATSLTVRSRQPEAIEVMAQAARLN"
BASE COUNT          464 a          849 c          663 g          438 t
ORIGIN      
        1 tcatgccagg tctcctgccc atcccgggtc agcgaccagc gcagccccag catccccggc
       61 tgctgcttcc acgtctcgat ccgcttgcgt tgcgacgggt cattcaacgc aaaccacccc
      121 aacgcgcaga atttgtccgg atatttgacc gccgcctcaa cagccatttc gttcgagtgc
      181 gcgtcccagc ttggcggatg cagcaccgcg ccgttcaccc ccgccgcatc catttccgcg
      241 atcaactctt cggccgtata aaccgacgtc tggcgatgat gagcgctggg tttgccgctg
      301 ccccagatat gaacttgcgc atcgataatc agcatggacc gcctccttcc tgttttcccg
      361 atgctggcct cttgccggcc ccgacgcaac cgggccaaac agggttggca acccaaactg
      421 ggtggtaaca aggagtgcgc acggtgctgg atcgggtcat gctgacgaac gatgacggga
      481 tagacgcgcc cggcatgcag gtgctggaag aaatcgccgc ccaaatcgcg cgcgaggtct
      541 gggtcgtggc acccgaacac gaccagagcg gccagtccca cgccatcagc ctgcaccacg
      601 ccctgcgcat cagcgaacgt ggtgagcgcc gcttcggcgt caccggtacc cccggcgatt
      661 gcgccgcgat cggcctgtgc catctgatga aagacaaccc gccgcaactg gtactgtcgg
      721 gcgtcaatcg aggcctgaat ctcggcatgg aaaccgtctt ttccggcacc gtcggcggcg
      781 ccatgaccgc gatgatgctg ggctgtcccg cgctggcact cagccaggcg ttcacggacc
      841 gcaacaatgt gccatgggac accgcacgct cactcggtgc cgagacgatc aacaagctgc
      901 tgtcggtcgg ttggggaaaa agcgcagtac tgaacatcaa ttttccccct atccccgcag
      961 ccgaggccgg cccgatgacc ctcgcccgtc agggtgaggg cgcggtcgca ggcatgcatg
     1021 tcgacacccg catcgatccg cgcggcatgt cgtatcactg gctgaatttc aaacgcggtg
     1081 acatccagca agggccggaa agcgattaca gcgccatgcg cgccggcaaa atcgtcgtga
     1141 ccccgttgcg ctacgaccgg accgacgacg atgcctacgc cgaactggcc acgcacctgc
     1201 cgcgatacgg gcaatagcgg tgtaaaacca atccgcgttg aggccgactc tccgccggcg
     1261 accgccccgt catgccgacg aaggtcggca cccacgcctt ttgccgctcc atccaaaagc
     1321 atggctggtg ggctttcgcc acgatgatgg ttagaggtca gtgccgtgta tcagtctttc
     1381 agcggaatag tatgggccta acccgactgc ccgcccgtca cgtcgatcgt cagccccgta
     1441 acgaaatcgg cgtccgagga agccaggaag cagatcacct tcgcctgatc tgacgcttcc
     1501 gccacacgcc gcagcggtgt cgcctccacc tgtgctgcct gggcctccgg cgaccgctgg
     1561 ttccaatgcg gcctgatccg ttccgtcagc gtcaggctcg gagcgatcgc attgatgttg
     1621 atcccgaacg gaccaagttc gaacgacaac ttccgggtaa acgcaatgat tccacccttg
     1681 gcggcagcat aggcacaccc gctggcgata ctcatgcccc gtccggcaat cgaggccaga
     1741 ttgacgatct ttccagcgtt ctgccgtttc atgatcggca caaccgcatg agtgaacagg
     1801 aacgtcccgt ccagattgaa ctttatcacc cgctgccagt catccagtga gtgttcctcg
     1861 accaccgctg atggcttggc aatgatcgtg ctgccgccca cagcgttcac caggatatca
     1921 atccgaccga attcccgggt cacatcggca acgaccgcat cgacctggcc ctgatccagc
     1981 gcatcgcaca accgcccatg cgctcccttt cccagcgcgg caacggccgc acccagccgt
     2041 tccgggtggt tatcaacgca aaccaccgtc gctccctccg ccgccataat cgccgccgac
     2101 gctcggccga tcccattcgc tgccgccgta atcagcgcaa ttttgccctt gaagcgcatc
     2161 gttccccccc cgttctcagt tcaatcgagc ggcctgtgcc atcacctcga tggcttcggg
     2221 ttgacgcgac cgaacggtca gactggtagc accggaatct tcccacgccc ggaaccgctc
     2281 gcgaatccga gccggcggcc caaccaggga cttcatatcc acccattcat ccgggaccgc
     2341 cgcgatggcc tcatccttgc ggtgtgccag gtacaactcc tgaatacggt cggcggcttc
     2401 ggcgaatccc cgcc
//
LOCUS       DATAVD010000548         2334 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1166944, whole genome shotgun sequence.
ACCESSION   DATAVD010000548 DATAVD010000000
VERSION     DATAVD010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1166944"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..529
                     /locus_tag="VHX39_10145"
     CDS             <1..529
                     /locus_tag="VHX39_10145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3991518.1"
                     /translation="RLFAGMTVLENLLVAQHNVLMRASGLTLFAVLGLGRFRSAERQG
                     LDNARHWLDRIDLLDRADDLAGALPYGAQRRLEIARAMCIDPVLLCLDEPAAGLNPRE
                     TEALNALLQTIRADGCTLLLIEHDMGVVMRISDHIVVLDHGKKIADGTPAEVRADPAV
                     IAAYLGEGDEDEAPA"
     gene            526..1248
                     /locus_tag="VHX39_10150"
     CDS             526..1248
                     /locus_tag="VHX39_10150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3991519.1"
                     /translation="MTATLAMTGVSAFYGAVQALRNVDLEVNPGEIVTLIGANGAGKS
                     TLMMTVCGNPRARSGSVLHEGQDITNLPTHLIMRRGIAQSPEGRRIFGRMTVHENLLM
                     GAEAAGRTDAPALLEEMFALFPRLRERIGQRGGTLSGGEQQMLAIARALMSRPRLLLL
                     DEPSLGLAPLVARQIFGAIRELNRRTGLTVLLVEQNAYQALRLAHRGYVLVNGAITMA
                     GTGAELLARPEVRAAYLEGGHA"
     gene            1417..>2334
                     /locus_tag="VHX39_10155"
     CDS             1417..>2334
                     /locus_tag="VHX39_10155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX3991520.1"
                     /translation="MQTMKAAIFVEKGRIVLDDKPIPAVGPLDALMRITTTTICGTDV
                     HILKGEYPVKRGLTIGHEPVGIIEKLGSAVVGFKEGQRVIAGAITPSGWSSACLCGCL
                     SQDGAGTKHGFQAIGGWKFGNTIDGTQAEYVLVPDAMANLAVVPDGLTDEQVLMCPDI
                     MSTGFSGAESGHVRIGDTVAVFAQGPIGLCATAGARLAGATTIITVDSVPARMDVSRK
                     MGADHVVDFKAGDPVAEIMRLTDGRGVDVAIEALGTQTTFESALRVLRPGGTLSSLGV
                     YSTDLKIPLDAFAAGLADLKIVSTLCPGGK"
BASE COUNT          423 a          640 c          791 g          480 t
ORIGIN      
        1 ccgtctgttc gccggcatga ccgtgctgga gaacttgctg gtcgcgcaac ataacgtgct
       61 gatgcgcgcc agcgggttga cattgttcgc cgtgctcggc cttggtcgtt tccggtctgc
      121 agaacggcag ggactggaca acgcacggca ctggttggat cgcattgact tgctcgatcg
      181 agcggacgat ctggccggtg cattgcctta tggtgcccag aggcgactgg aaattgcccg
      241 ggcgatgtgt atcgatccgg tgctgttatg tttggacgag cccgctgccg gcctcaatcc
      301 gcgcgagacc gaggcattga atgcgttgtt gcaaaccatt cgtgccgacg gctgcacttt
      361 gttgctgatc gagcatgaca tgggcgtggt gatgcggatt tcggatcaca tcgtcgtgtt
      421 ggatcacggc aagaaaatcg ctgacgggac accggccgaa gtgcgcgctg accctgcggt
      481 gattgctgcc tatcttggcg aaggtgatga agacgaggcg ccagcatgac ggcgacgctc
      541 gccatgactg gcgtgtccgc tttctacggc gcggtacagg cgttgcgcaa tgtcgacctg
      601 gaggtcaatc ccggcgagat cgttacgttg atcggtgcca atggtgccgg caagtcgacg
      661 ctgatgatga cggtctgcgg caatccgagg gctcgttccg ggtcggttct gcatgagggc
      721 caggatatta ccaacctgcc gacccatctg atcatgcggc gcggcatcgc tcaatcgccg
      781 gaaggacggc gaattttcgg gcgcatgacg gtgcatgaga atttgctgat gggcgctgaa
      841 gccgcgggcc ggaccgacgc gccggcgctg ttggaagaaa tgttcgcgct gtttccgcga
      901 ttgcgcgagc gcattggtca gcgaggcggc acattgtccg gcggcgagca gcagatgttg
      961 gcgatcgctc gcgcgttgat gtcacggcct cgattgttgc tgctggacga accgtcgttg
     1021 ggcctggcgc cgttggtggc gcggcagatt tttggtgcga tacgggaatt gaaccggcgc
     1081 accgggctga ctgtattgtt ggtggaacaa aatgcttatc aggcgttgcg gctggcacat
     1141 cggggttacg tgctggtgaa cggggcaatc accatggcgg gcaccggtgc ggagttgttg
     1201 gcccgcccgg aagtgcgagc ggcgtatctg gaaggtggac acgcttaaaa tcgggtcagc
     1261 gcagcacgcc tgattttagg gtcgcatctc cgccagtgag gctacggcgt tgcgctcgca
     1321 attccgttaa ccggatattt accctgcact gacctaaatc aacatcgccc gaacccgggg
     1381 cgcctatcaa ctgcccggcc aacacaggag cgatgcatgc aaacgatgaa agccgccatc
     1441 tttgtggaaa agggacggat cgtcctggat gacaagccga tccccgcggt ggggccgctc
     1501 gatgcgctga tgcggatcac cacgacgacg atctgcggca ccgacgtgca catcctgaaa
     1561 ggcgagtacc cggtgaagcg cggcctgacg attggtcacg aaccggttgg catcatcgaa
     1621 aagctcggct ctgcggttgt tggcttcaag gaagggcagc gagtgattgc cggtgccatc
     1681 acgccatccg gctggtcctc ggcatgtctt tgcggctgcc tcagtcagga tggagcgggc
     1741 acgaagcatg gcttccaggc aatcggcggc tggaagtttg gcaatacgat cgatggcact
     1801 caggcagaat acgtgctggt gccggatgcg atggccaacc tggccgtggt gcctgacgga
     1861 ttgacggatg agcaggtact gatgtgcccg gacatcatgt ccaccggttt ctccggggct
     1921 gagagcggcc atgtccggat cggcgacacg gttgcggtat ttgctcaggg accgatcgga
     1981 ctctgtgcga ctgccggagc gcggttggcc ggcgccacca cgatcatcac cgtggacagt
     2041 gtgcctgctc gtatggacgt gtcccgcaag atgggcgccg accatgtggt ggacttcaaa
     2101 gccggtgatc cggtcgcgga aatcatgcgc ctcaccgacg gccgcggtgt cgacgtcgcg
     2161 atcgaggcgc ttggcacgca gaccacgttc gaaagcgcat tgcgcgtgct gcgtccgggc
     2221 ggcacgctgt cgagtttagg cgtttattcg actgacctga aaatcccgct cgatgcgttt
     2281 gccgccgggt tggctgatct gaagatcgtt tcgacgctgt gcccaggagg gaag
//
LOCUS       DATAVD010000549         1789 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2097459, whole genome shotgun sequence.
ACCESSION   DATAVD010000549 DATAVD010000000
VERSION     DATAVD010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1789)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1789)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1789
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2097459"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..725
                     /locus_tag="VHX39_10160"
     CDS             <1..725
                     /locus_tag="VHX39_10160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991521.1"
                     /translation="VIGLKENSSRKTGIVYVRTTGFNQHSKPVLEYVRWVMVNKHDHA
                     APAPGDHVPRLPTAVDPKVLGEACPAIDKEAYDCVLAGSEHRFGDYAVGEKIDHVDGI
                     TVEEAEHQTATRLYQNTARIHFDLFSAKQGRFGRRLIYGGHVISLARGLSFNGLANAF
                     HVAGINGGRHVAPLFAGGTIFAWSEILAKADLPGRDDVGALRLRTVATNDKLCRDFPY
                     KNGDEYDPAVLLDLDYWVLMPR"
     gene            complement(768..1676)
                     /locus_tag="VHX39_10165"
     CDS             complement(768..1676)
                     /locus_tag="VHX39_10165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3991522.1"
                     /translation="MRFDLADLSLFRHVVEAGSITHGAERAHLALAAASTRVRNMEEA
                     LGVPLLTRGRQGVTPTQAGRTLLQHARTILRQAERLHEDLSAYGGGLAGQIRVLSNTN
                     ALTEFLPEALSSFLASHPNVSVDLEERLSDEIVGLIAEGVADLGVVAGTVDAGALETY
                     PFRRDRFVLVVAQDHPLAKRSRIGFEEVLEHDFIGLDRSSAIQRFLATKAVRIGRPLR
                     LRVQLRSFDAVCRLVECKVGIGIVPETTAHRVSKTMAIKPVMLSDPWAVRDLTICLRS
                     RDDLPVYARQLVEHLRAQEKVDPKTN"
BASE COUNT          387 a          528 c          526 g          348 t
ORIGIN      
        1 aagtcatcgg gttgaaggaa aattccagcc ggaaaaccgg catcgtttat gttcgcacca
       61 cgggtttcaa ccagcactca aaacccgtgc tggaatatgt gcgctgggtg atggtgaaca
      121 aacacgatca tgcggcgcct gcaccgggcg atcacgtgcc gcggctgccg actgcggtcg
      181 atccaaaggt cttgggtgaa gcgtgcccgg cgatcgacaa agaagcttac gattgtgttc
      241 tggccggcag tgagcatcgc tttggcgatt acgcggtcgg tgaaaagatc gaccacgtgg
      301 acggaattac ggtcgaagaa gccgagcatc aaaccgcgac acggctctac cagaacaccg
      361 caagaatcca tttcgatctg tttagcgcca agcaaggccg cttcggcagg cgattgatct
      421 atggtgggca tgtgatctcg ctggcacgcg ggctgtcatt caatgggctc gccaacgcat
      481 tccacgtagc cggcatcaat ggcgggcggc acgtcgcacc gctatttgct ggcggcacca
      541 ttttcgcgtg gtcggaaatc ctggcgaaag cggatttgcc aggccgcgac gatgtcggcg
      601 cgcttcgcct gcgtactgtc gcaaccaatg acaagctgtg ccgcgatttt ccgtataaga
      661 acggcgacga atacgatccg gcggtgctgc tcgatctcga ctactgggtg ctgatgccgc
      721 ggtgaagttg taaccgtccg ccacttgctt ttgcggataa tgacaattca gttcgttttc
      781 ggatcaacct tctcttgcgc ccgcaaatgc tccacgagct gccgtgcgta gacgggcaaa
      841 tcatcgcggc tgcgcaagca tattgtcagg tcacgcaccg cccatggatc ggacagcatt
      901 accggtttga ttgccatcgt cttcgacaca cgatgcgccg tcgtttccgg cacaatgccg
      961 atgccgacct tgcattcgac cagccggcac acggcgtcga agctgcgcaa ctggacacga
     1021 agccggagcg gccggccgat ccgcacggcc ttggtggcga gaaaacgctg aatcgcactg
     1081 gagcgatcaa ggccgataaa gtcgtgttcc agcacttcct cgaagccgat ccggcttcgc
     1141 ttcgctagcg gatggtcctg ggcaacgacc agaacaaagc ggtcacggcg aaacgggtag
     1201 gtctcgagag cgccggcatc aaccgtgccg gcaacgacgc ctaagtcggc gacgccttcc
     1261 gctatcaggc caacgatctc gtcgctgagg cgttcttcca gatcgacgct gacgttggga
     1321 tgcgacgcaa gaaacgagct cagcgcctct ggcaggaatt cagtcaacgc attggtattt
     1381 gacagcacgc ggatctgccc cgccaggccg ccgccataag cgctgaggtc ctcatgcagg
     1441 cgctcggcct gtcgcaggat agtgcgcgca tgctgcagca atgtgcggcc ggcctgggtg
     1501 ggcgtcacac cctgccgtcc gcgtgtcagc agaggaacgc cgagcgcctc ctccatattt
     1561 cggacgcggg tcgacgcagc agcaagggcg agatgggccc gttccgcacc gtgggtgatg
     1621 cttccggcct cgaccacatg ccggaacaag ctcagatcag cgaggtcaaa acgcatacta
     1681 tcaaccttcg ttttttacga agctaggctc tgtatgaagc ccgttgttaa agcaataatt
     1741 cagactaatc ttcgcatagt acgaagcaag gcgacctgca acaatacac
//
LOCUS       DATAVD010000550         2145 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2657599, whole genome shotgun sequence.
ACCESSION   DATAVD010000550 DATAVD010000000
VERSION     DATAVD010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2657599"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1407)
                     /locus_tag="VHX39_10170"
     CDS             complement(<1..1407)
                     /locus_tag="VHX39_10170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiU family protein"
                     /protein_id="HEX3991523.1"
                     /translation="MGADQMPARYRFDNTYASLPDRFHARLEPAPVAAPRLLRVNVPL
                     AERLGLDPDALASPEGVQELAGNRVPDGAMPIATAYAGHQFGHFVPQLGDGRAVLLGE
                     VVAQDGARFDIQLKGSGRTKFSRGGDGRAALGPVLREYIVSEAMAALGVPTTRALAAV
                     ATGEPVYRETLLPGAILTRVASSHIRVGTFQCFAARADTEAVQQLADYVIARHYPDAA
                     AAENPYRALLDAVMARQAALVAHWLLIGFIHGVMNTDNCAVSGETIDYGPCAFMDAYD
                     PATVFSSIDQHGRYAYGNQPRIAVWNLARLAETLLPLLAADQDKAIEIAQDTLAGFSP
                     RFEAAYFGGLLRKIGLATKKDGDITLVNDLLKLMAENAADFTLTFRRLSDAAADPAAD
                     LAVRGLFADPGAYDLWAPRWRWRMDEEGREPGVIRDAMRAVNPAYIPRNHLVEAALNA
                     AIERDDLSLFEQLLEVLSR"
     gene            complement(1615..>2145)
                     /locus_tag="VHX39_10175"
     CDS             complement(1615..>2145)
                     /locus_tag="VHX39_10175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2 family protein"
                     /protein_id="HEX3991524.1"
                     /translation="PERGRIGIFNRSSYEEVLIVRVHPEILEAEGIPAPTRSLKKRWH
                     YRYRSINNLERHLHGSGTQIVKFFLHLSKDEQRKRFLARIEEPRKNWKFSVADIRERA
                     FWDDYMAAYEDCLSATSTDHAPWYVVPADDKPNARLIVSQIIVDTLDGLKLRYPKTDA
                     ERRKELEAIREALEKE"
BASE COUNT          398 a          689 c          677 g          381 t
ORIGIN      
        1 ccgcgacagc acctcgagca gttgctcgaa caggctcaga tcgtcccgct cgatggccgc
       61 gttaagcgcc gcctctacga gatgattgcg cggaatgtag gctggattga ccgctcgcat
      121 cgcgtcacgg atcacccccg gctccctgcc ctcctcgtcc atccgccaac gccaacgggg
      181 agcccaaaga tcgtaggcac cagggtcggc gaacaacccc cgcacggcga ggtcggctgc
      241 cggatcggcc gccgcgtcac tcagccggcg aaaggtcaag gtgaagtcgg ccgcgttctc
      301 cgccatcagc ttcaacaaat cgttgaccag cgtgatgtcg ccatctttct tggtggccag
      361 accgattttg cgcagcaatc cgccgaaata cgcagcctcg aagcggggac tgaagccggc
      421 gagcgtgtcc tgcgcgattt cgatggcttt atcctggtct gcggccaaca ggggcagcag
      481 cgtttccgcg aggcgggcaa gattccacac cgcgatgcgc ggctggttgc cgtaagcgta
      541 gcgcccgtgc tggtcgattg aactgaacac cgtggccggg tcataggcat ccatgaacgc
      601 acacgggccg taatcgatgg tctcgccgga caccgcacaa ttatcggtgt tcatcacccc
      661 gtggatgaag ccgatcagca accaatgcgc cacgagcgcc gcctgccgtg ccatgacggc
      721 gtcgagcaag gcgcggtacg ggttttccgc cgctgcggca tccgggtaat ggcgggcaat
      781 cacgtaatca gccagctgct gaaccgcctc ggtatcggcg cgggcagcga aacactggaa
      841 cgtgccgacg cggatgtggc tggaagcgac gcgggtcagg atggcgccgg gcaacagagt
      901 ctcgcgatac acgggttcgc cggtcgccac cgcagcgagc gcccgtgtcg tcggcacgcc
      961 aagcgctgcc atcgcctcgc tgacaatata ttcccgcaac accggaccaa gggcggcgcg
     1021 cccatcaccg ccgcgggaaa atttcgtccg gcccgagccc ttgagctgaa tgtcgaagcg
     1081 ggcgccgtcc tgggcgacca cctcgcccaa cagaacggcg cggccatcgc ccagttgcgg
     1141 gacgaaatgg ccgaactggt gaccggcata ggcggtagcg atcggcatcg cgccgtctgg
     1201 cacacgatta ccggccagtt cctgaacgcc ttccgggctc gccagagcat ccgggtccaa
     1261 gcccagacgt tcggccaatg ggacattgac ccgcaacaga cgcggtgccg cgaccggggc
     1321 gggctcgagc cgcgcatgga aacggtcagg aaggctggcg taggtgttgt cgaaacgata
     1381 gcgggcaggc atttgatcgg cccccatgtt ggtccgcacc tcgcggttca tgcacggata
     1441 tgtggtgcgg caatagccgt ttgaccagcg attctgccgc accccctgca cgggatgcaa
     1501 tgcccgcggg acgcaaccat ggtgtccgtg ggcctgatgg cgctggcgcg ggatgatcgc
     1561 cccattccgg ctgacctagg caccgctgac cgcggcaaat caccgctggt aaaactattc
     1621 tttctccagg gcctcgcgga tggcctcgag ttccttacgg cgttcggcgt cggttttcgg
     1681 atagcgcagc ttcagcccgt ccaacgtgtc gacaataatc tgcgacacga tcaatcgtgc
     1741 gtttggcttg tcgtccgccg gaacgacgta ccacggcgca tgatcggtgc tggtggcact
     1801 caggcaatct tcgtaggccg ccatgtagtc gtcccagaac gcccgctccc gaatatccgc
     1861 aacgctgaac ttccagtttt tgcgtggttc ctcgatccgg gcgagaaacc gcttccgttg
     1921 ctcgtccttg gacaaatgca ggaagaactt gacgatctgc gtgccgctgc cgtgcagatg
     1981 ccgttccaaa ttattgatcg agcgatagcg gtagtgccag cgcttcttca ggctgcgcgt
     2041 gggggcgggg atgccttccg cctcgaggat ctcggggtgg acgcggacaa tcagcacctc
     2101 ctcataagag ctgcggttga agatgccgat gcggccgcgc tcggg
//
LOCUS       DATAVD010000551         3483 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3216064, whole genome shotgun sequence.
ACCESSION   DATAVD010000551 DATAVD010000000
VERSION     DATAVD010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3483
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3216064"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1381)
                     /locus_tag="VHX39_10180"
     CDS             complement(<1..1381)
                     /locus_tag="VHX39_10180"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3991525.1"
                     /translation="MSGLQYRAPGVRTSLQTMNPPPSSASDAPIRVTERSTRPQTILL
                     IVASAMFMEQLDGTVLATALPTMARSFNVDPLHMNIALTAYLLTLAMFIPASGRLADR
                     FGSRSVFRAAIGLFTVGSVLCAQAPTLWALVAARMLQGAGGAMMSPVGRLVMLRVVSK
                     AELVRSMAWLMVPATIGPIVGPPLGGFIVTYLSWHWIFYINVPIGVVGIILVTIFIDE
                     MKEPARTKFDLLGLVLSGTALACLMFGIEVGSRGAGSIGIVAALLGVGSVSGVMYWFH
                     SRRVPRPMLDFRLLRVTTFRMSLLCGSLSRIAVGAMPFLMPMMFQLGFGLSAVQSGLI
                     TFVSSVGSLAMRACAPAILQRLGFRPVLTWVGALATALLALSAAFRPDWPLPLIYGVL
                     IANGFFQSLQFMAYNTIAYADVPREDMSAATSFYTTFQQMSLTMGIAISAAALAASIG
                     VTHHAHAMLP"
     gene            1476..2660
                     /locus_tag="VHX39_10185"
     CDS             1476..2660
                     /locus_tag="VHX39_10185"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3991526.1"
                     /translation="MTQPTGPLSGIRVIDITTVVLGPFCTQTLGDMGAEIIKVETTQG
                     DSTRLIGPSRTPGMGSYFANLNRNKRSLALDLKKPAARQAILRLVETADVVVHNMRIG
                     AAQRLGLDYATLSARNPKLVYACASGFRKGSSMQEFPAYDDLIQGVSGTASLNAGPDG
                     APRYFPTVMVDKLTGAQLASMIGMALFHRERTGQGQEVHLPMMETILSFMLVEHLWHG
                     TLGEPEKGLGYPRMLTPHRRPYPTKDGYISVIAHSDEQWGKLFEAMGVPELIQDPRFN
                     SVSARSKNIDAVYATLTDGMTRRTTEEWLAELRPADIPCGKANNLDDLFTDPYLAETG
                     YFEAHQHPTEGDVVIPAIPARFSKSPPNIHRPWPTLGQHSREILAEVGYTEAETEAIL
                     GE"
     gene            2850..>3483
                     /locus_tag="VHX39_10190"
     CDS             2850..>3483
                     /locus_tag="VHX39_10190"
                     /inference="COORDINATES: protein motif:HMM:NF022995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019825 - oxygen binding [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protoglobin domain-containing protein"
                     /protein_id="HEX3991527.1"
                     /translation="MASDHGINERLDFLRFDGATRAILTEFMPTLRRELPAILLAFYK
                     HIQRWPQLANMFQGQVAMDRASKAQGEHWLKLFSGRVDDDYAASVRRIGLMHSRIGLE
                     PRWYIGGYSFILGQLYTVASHAFASRLKPAAARQKTAALMCALNQAVMLDMDLAISIY
                     IEENRAAFDRKLTTLAETFEAKIGPLVGSVTTQATTLKDTAATMSSAAERT"
BASE COUNT          748 a         1205 c          982 g          548 t
ORIGIN      
        1 ccggcagcat ggcgtgcgcg tggtgcgtca ccccgatcga ggccgccagc gccgccgccg
       61 aaatcgcgat tcccatcgtc agcgacatct gctggaacgt cgtatagaag ctggtcgccg
      121 cgctcatgtc ctcgcgcggg acatcggcat aggcgatggt gttgtaggcc atgaactgca
      181 acgactggaa aaaaccgttc gcgatcagca ccccatagat cagcggcagc ggccaatccg
      241 gccggaacgc ggcacttaac gccagcagcg cggtggcgag cgccccgacc caggtcagca
      301 ccggccgaaa ccccagccgt tgcaggatcg ccggcgcaca ggcgcgcatc gccagtgatc
      361 cgaccgaact gacgaaggtg atcagcccgc tttgcaccgc agaaagccca aaacccaact
      421 ggaacatcat cggcatcagg aacggcatcg ccccaacggc gatccgcgac agcgatccgc
      481 acagcagcga catgcggaac gtcgtcaccc gcagcagccg aaaatccagc atcggccgcg
      541 gaacccggcg cgagtgaaac cagtacatca cccccgagac cgatcccacc cccagcagcg
      601 ccgcgacgat cccgatggat ccggcgccgc ggctgcccac ctcgatcccg aacatcaggc
      661 aggccagcgc cgtgccggac agcacaagcc cgagcagatc gaatttcgtg cgcgccggct
      721 ccttcatttc gtcgatgaag atcgtgacca gaatgatgcc caccacgccg atcggcacgt
      781 tgatgtagaa aatccagtgc cacgacagat aggtcacgat aaacccgccc agcggcggcc
      841 ccacgatcgg cccgatcgtc gccggcacca tcagccatgc catcgaccgc accagctcgg
      901 ccttcgacac cacccgcagc atcaccagcc gccccaccgg cgacatcatc gcgcccccgg
      961 cgccctgcag catgcgggcc gccaccagcg cccacaacgt cggtgcctgc gcgcacagca
     1021 ccgacccgac cgtgaacagc ccgatcgccg ctcggaacac cgatctcgac ccaaaacgat
     1081 ccgccaaccg cccgctcgcc ggaatgaaca tcgccagcgt cagcagatat gccgtcaatg
     1141 cgatattcat gtgcagcgga tcgacgttga agctgcgtgc catggtcggc agcgcggtcg
     1201 ccagcaccgt gccgtccaac tgctccatga acatcgcgct ggcgacgatc agcaggatgg
     1261 tctgcggacg ggtggagcgc tccgtcaccc ggatgggcgc atcggaggca gacgacggcg
     1321 gtgggttcat ggtttgcaag ctagtgcgaa cgcccggcgc gcgatattgc agtccggaca
     1381 tgccagcctg aacctactcg cccgacccag gggtcaacat tgccaatccg ccgcccggcg
     1441 gcgatgctcc gatgcccaaa gatgaggaaa caaccgtgac gcaaccaacc ggcccgctgt
     1501 ccggcatccg ggtgatcgac atcaccaccg tcgtcctcgg ccctttctgc acccagaccc
     1561 tcggcgacat gggcgccgaa atcatcaagg tcgaaacgac ccagggcgac tccacccgcc
     1621 tgatcgggcc atcccgtaca ccgggcatgg gatcgtattt cgccaacctc aaccgcaaca
     1681 aacgcagcct ggcgctcgac ctgaaaaagc ccgccgcgcg gcaggccatc ctccgcctgg
     1741 tcgagaccgc cgacgtcgtc gtccacaaca tgcggatcgg cgccgcccag cgtctgggcc
     1801 tggactatgc gacgctgtcc gcccgcaacc ccaaactggt ctacgcctgc gcctccggct
     1861 tccgcaaagg cagctcgatg caggagttcc ccgcctacga cgacctgatc cagggcgtat
     1921 ccggcaccgc ctcgctgaac gccggccccg acggcgcgcc ccgctacttc cccaccgtca
     1981 tggtggacaa gctgaccggc gcgcaactgg cctcgatgat cggcatggcg ctgtttcatc
     2041 gggaacgcac cggccaaggc caggaagtcc atctgccgat gatggaaacc atcctgtcct
     2101 tcatgctggt cgagcatctc tggcacggca cccttggcga accggaaaaa ggcctcggct
     2161 acccgaggat gctgacgccg catcgccgcc cgtatccgac caaggacggc tacatcagcg
     2221 tgatcgccca tagcgacgag caatggggca agctgttcga ggcaatgggc gtccccgaac
     2281 tgatccagga cccaagattc aattcagtct ccgcccggtc gaaaaacatc gacgccgtct
     2341 acgccacgct gacggacggc atgacccggc gcaccaccga ggaatggctc gccgaactgc
     2401 gcccagcgga catcccctgc ggcaaggcca acaatctcga tgacctgttc accgacccgt
     2461 acctggctga gaccggctat ttcgaggccc accagcatcc caccgagggc gacgtggtca
     2521 ttccggcaat tccggctcgc ttctccaaat cgccaccgaa catccatcgt ccctggccga
     2581 ccctcggtca gcattcgcgg gaaatccttg ccgaagtcgg atacaccgag gccgaaacag
     2641 aggcgatcct gggcgaataa ggccaagtga tcgacggaga cgttcaaaac cggagggcga
     2701 agccaaatcg ggcggcgtgg agccggcgcg gaagaatgtc tatcgtgtgg tcaagctggt
     2761 cggccactga cgctcgctcg aaatgctcaa attttacagt ttattaatga ttccgatcta
     2821 aagcctctgc agtagctgga gtataggccg tggcatccga tcatggaatt aatgaacgtc
     2881 tcgactttct gcggtttgac ggtgccacgc gcgcgatcct gactgaattt atgccgacac
     2941 ttcggcgcga actgcctgcc atcctattgg cgttctacaa gcacattcag cggtggccac
     3001 aactcgccaa catgtttcag ggtcaagtgg ccatggatcg cgccagtaag gcgcaaggcg
     3061 agcattggct aaaactcttc tcaggtcgtg ttgacgatga ctatgccgct tctgtgcgtc
     3121 gcatcggtct gatgcatagc cgcatcgggc ttgagcctcg ctggtatatc ggtggatact
     3181 cgttcattct tggccagctt tacacagtgg ccagccatgc ttttgccagc cgcctgaagc
     3241 cggccgccgc ccggcaaaag acagccgcgc tgatgtgcgc cttgaatcaa gccgtcatgc
     3301 tcgacatgga tctcgcgatc tcaatatata tagaggaaaa cagggccgct ttcgatcgca
     3361 agctcaccac gctggccgag acgttcgagg ccaagattgg accactcgtt ggcagcgtca
     3421 caacccaagc gacgacactg aaggatacag cggcgacgat gtcctcggcc gcggaaagaa
     3481 cca
//
LOCUS       DATAVD010000552         2562 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3216095, whole genome shotgun sequence.
ACCESSION   DATAVD010000552 DATAVD010000000
VERSION     DATAVD010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2562
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3216095"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..803
                     /locus_tag="VHX39_10195"
     CDS             <1..803
                     /locus_tag="VHX39_10195"
                     /inference="COORDINATES: protein motif:HMM:NF016513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEX3991528.1"
                     /translation="LLSPRGDLAYLGALAFSVTAAVGIVAAAIMKFAVLPAAETFPAL
                     CAAMGLFLMPIGFAVIRSRSPALVAMSGGMAVAVMRLLSPTNPMTYDMAQFYNTALAI
                     FVGCGIGPLALRLLPPLSPALRTRRLLALTLRDLRRLAVSALPPQSADWERRMYDRLA
                     ALPDQAPPSQRERLLAALSVGIDIIHVRRLISRVGKATELYAALVFLADANSTAATAR
                     LYELNRCLASDLNIEQEADDALRLRGRIIAISEVLVEHGSYFDSRIMT"
     gene            800..997
                     /locus_tag="VHX39_10200"
     CDS             800..997
                     /locus_tag="VHX39_10200"
                     /inference="COORDINATES: protein motif:HMM:NF019484.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1656 domain-containing protein"
                     /protein_id="HEX3991529.1"
                     /translation="MSFAEIDLFGVYVAPISLILVGAWLVTIALRRIADHFGLLRHVW
                     HPALFVFAVYIIILSSWILIV"
     gene            1093..2127
                     /locus_tag="VHX39_10205"
     CDS             1093..2127
                     /locus_tag="VHX39_10205"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX3991530.1"
                     /translation="MPILVTLVVVAFASLPGWVAWDAYMAAPWTRDATVRAYVVTMAP
                     EVTGRIVELPVADNRYVRKGELLMAIDPTNFAIAISQAEAAVRQAQASVENTDAQMEV
                     QHAQIDAGQSQLDQARAAHIFAQQQATRFQTLAQDGWGTVQNAQQFTSQLYQQAAAVQ
                     TARANLNLAQRQIESLKAQRMSAEANVTQAKAQLRQAQVNLERTRIVSPVDGYVTNLL
                     AQSGDFVNAGANTISVVDAESFWVDGYFEETTLAPIRVGDPTRIKLMGHGEIMRGHVD
                     SIARAINVANAQPAAQGVANVNPIFTWVRLAQRIPVRIHIDEMPPGVILSAGMTATVE
                     IVVRDRGRGT"
     gene            complement(2202..>2562)
                     /locus_tag="VHX39_10210"
     CDS             complement(2202..>2562)
                     /locus_tag="VHX39_10210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991531.1"
                     /translation="MAEGFEVLKWMEQLEAAIYSPELLRLKGELSRLLGTQVGAEAAK
                     DHFQQALDEARRQGTLAWELRAAMSLARLLRDQGRPNDGSACLQPIYDRFTEGFATAD
                     LTAAKRLLDDLGTAGRR"
BASE COUNT          450 a          807 c          787 g          518 t
ORIGIN      
        1 tgttgctgtc accgaggggt gatctggcct acctcggcgc ccttgcattc tcggttaccg
       61 ccgctgttgg catcgtggcc gcggcgatca tgaaattcgc ggttttgcct gctgccgaaa
      121 cgtttcccgc cttgtgcgcc gccatggggc tttttctgat gccgatcggc tttgccgtga
      181 ttcgcagccg gtcgcccgcc ctggtggcca tgtccggcgg catggccgtc gccgtgatgc
      241 ggcttctgtc acccacgaac ccgatgacct acgatatggc gcaattctac aataccgccc
      301 tggcgatttt cgtcgggtgc ggaatcggac cgctggcgct tcgtttgttg ccgccgctgt
      361 cgcccgcgct gcgaacacgc cgactgctcg ctcttacttt gcgcgacctg cgacggctgg
      421 cggtcagcgc actgccgccg caatcggcgg actgggaacg ccggatgtac gaccggctcg
      481 ccgctttgcc ggaccaggcg ccgccgtcgc aacgcgagcg cctgctggcg gcgttgtccg
      541 tcggcatcga catcattcat gttcgccgcc tgatctcacg cgttgggaag gcgacggagc
      601 tgtacgccgc gctcgtattc ctcgcggacg cgaatagtac ggccgcgacc gcacggctgt
      661 atgaactcaa ccggtgcctg gcctctgacc tgaacatcga acaggaggca gatgatgcgc
      721 ttcggttgcg cggtcgtatc atcgccattt ccgaggtact cgtcgagcac gggtcgtatt
      781 tcgactcgcg gatcatgaca tgagctttgc cgagatcgac ctgttcggcg tttacgtcgc
      841 accgatctca ttgattctcg ttggtgcctg gctcgtcacg atcgcactgc ggcgcatcgc
      901 cgaccacttc gggctgttgc gacacgtctg gcatcccgcg ctgttcgtct tcgcggtgta
      961 catcatcatt ctctcgtcct ggatactgat tgtttaacgg ttgagcttgt catgaccacc
     1021 attgaactcc tgtcaaaaga cgaagagcct gccacgaagc tccgcggtca ctcccaccac
     1081 cgtgtgaggg tgatgccaat tctggtcaca ctcgtggtgg tcgcgttcgc gtcattgcct
     1141 ggctgggtag cctgggatgc ctatatggca gcgccgtgga ctcgcgacgc caccgttcgt
     1201 gcctatgtcg tcacgatggc accagaggtc actgggcgga tcgtcgaact gccagttgcc
     1261 gacaaccgtt acgttcgtaa gggcgagctt ctgatggcaa tcgatccgac caactttgcg
     1321 attgccatca gccaggccga agcggcggtg cggcaggccc aggcgagtgt ggagaacaca
     1381 gacgcgcaga tggaggttca gcacgcgcag atcgatgccg gtcagtcaca actggatcag
     1441 gcacgggcag cgcacatatt cgcgcaacaa caggccacgc ggttccagac cttggcgcaa
     1501 gacgggtggg gcacggttca gaacgcccaa cagttcacgt cgcaactgta tcagcaagcg
     1561 gcggcggtcc agaccgcgcg cgcgaacctc aatttggcgc aacgccagat cgagtcgtta
     1621 aaggcgcagc gaatgagcgc cgaggcgaat gttacgcagg ccaaagcaca gctcaggcag
     1681 gcgcaagtca atcttgagcg cacgcgtatt gtctcgccgg ttgacggcta cgtcacgaac
     1741 ctgctggcgc agtctggcga cttcgtcaat gcgggtgcga ataccatctc ggtggtcgat
     1801 gcggaatcat tctgggtcga tggctatttc gaggagacga ccttggcgcc gatccgcgta
     1861 ggcgatccga cgcgcatcaa gctgatgggc cacggtgaaa tcatgcgtgg tcacgtcgac
     1921 agtatcgccc gtgccatcaa cgtcgcgaac gcgcaaccag ccgcacaagg ggtcgccaat
     1981 gtcaatccca ttttcacgtg ggtgcggctt gcgcaaagaa tcccggttcg cattcatatc
     2041 gatgagatgc cgcccggcgt catcctttcg gccggcatga ccgccacagt cgagatcgtg
     2101 gttcgggacc gcggacgggg gacgtgagac gggcgcccca ggcgctgcca gaggcatttg
     2161 gtcaaccgac caggcgcctt ttcgcgcggt gatagcgagc ctcagcggcg tccggccgtg
     2221 ccgagatcgt ccagcaaccg tttcgcggcg gtgagatcgg ctgtggcgaa accctccgtg
     2281 aagcgatcgt agatcggctg gaggcaggcg ctcccgtcgt tcggccggcc ctgatcgcgt
     2341 agcagccgag cgaggctcat cgccgcgcgc aactcccacg ccaacgttcc ttgccgacga
     2401 gcctcatcga gcgcctgctg gaagtggtcc ttcgccgctt ccgcgcccac ttgcgtgccc
     2461 agcaacctgg aaagttcgcc tttgagacgt agcaactcgg gtgagtaaat ggctgcctcg
     2521 agctgctcca tccatttaag cacctcgaaa ccctcggcca ta
//
LOCUS       DATAVD010000553         2871 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2283720, whole genome shotgun sequence.
ACCESSION   DATAVD010000553 DATAVD010000000
VERSION     DATAVD010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2871
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2283720"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            77..1513
                     /locus_tag="VHX39_10215"
     CDS             77..1513
                     /locus_tag="VHX39_10215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3991532.1"
                     /translation="MPDFDLLIIGAGAAGLSIAAGAAQLGVKTALVERDRMGGDCLNF
                     GCVPSKALLAAAHTANAIRGARRFGLHVAIFDIDWDAVRTHVQSVVAAIAPNDSEARF
                     TGLGVTVLHGEARFTGPDSVTVNGRTITAKHFVIAAGSRPVAPPIPGLADIPHWTNAE
                     VFNLAQRPTHLLILGGGPIGLEMADAFAGLGCPVTVIEAATIANRDDAELVDGLRLAL
                     TRRGVTFLEGVPVASAEPGPVLVLRDGRRIAGSHLLVAVGRQPNVEALNLEAAGIEAS
                     KLGIITDRGLRCRSNKRIYAVGDIADPIGIGPRAFTHVGLYHAGIVIRRALFRLPGKI
                     NYAALPRVTYTDPELAQTGMTEAEAKASGRRIRILRWPMAENDRAQTELDETGLVKLV
                     VKGNRIIGAGILAPNAGEMIGQWTLAISRRIPLSSLAGLIVPYPTRSEAGKRAAGSFY
                     TAKLFSERTKALVRFLGRFSRPANSRTL"
     gene            1881..2660
                     /locus_tag="VHX39_10220"
     CDS             1881..2660
                     /locus_tag="VHX39_10220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX3991533.1"
                     /translation="MSITSSTWDPAQYLKFSNERVRPAFDLLAQVPLQTAKHVVDLGC
                     GTGNMTGILKQRFPDADVLGVDGAETMLAKARTANPGCRFEQGDFSTWSPANPPDLIF
                     SNAALHWVTHHESLFPRLLSLLAPNGVLAVQMPSMHDAPLRALQNEVARQGPWSRYLD
                     DAGYARGLLPVEAYYDVIRPRVASLDIWQTTYLHVLTGENAVTEWAAGSSLRPFLDKL
                     PHDQEIAFRAAYSAALLPHYPRRPDGTTLLPFKRFFFIARI"
BASE COUNT          515 a          890 c          893 g          573 t
ORIGIN      
        1 ccggtgctcg ggccactgct ggcactcgcg atgctatccc tgacaccggt aatttggcgg
       61 aaatggcgga cattgcatgc ctgattttga cctgttgatt atcggagcgg gcgccgccgg
      121 tctgtcgatc gccgccggtg cggcgcagct tggcgtcaaa accgcgctgg tcgagcgcga
      181 ccgcatgggt ggcgactgcc ttaacttcgg ctgcgtgccg agtaaagcgc tgctcgccgc
      241 cgcccacacg gcgaatgcga tccgcggcgc cagacggttc ggcctgcacg tggcgatatt
      301 cgatatcgac tgggacgctg tccgcacgca tgtccaatcg gtggtcgccg ccatcgcccc
      361 gaacgactcc gaagcacgct ttaccggtct tggagtcacc gtgttgcacg gcgaagcgcg
      421 tttcaccggc cctgactcgg ttacggtcaa cgggcgcacc ataacggcga agcattttgt
      481 gatcgctgcc ggaagccgcc cggtggcgcc gccgatcccg ggtcttgcgg atatcccgca
      541 ctggaccaat gccgaggtgt tcaacctggc ccagagaccc acgcatttgc tgattttggg
      601 cggcggcccg atcggtctcg aaatggccga cgccttcgct ggtcttggat gcccggtgac
      661 ggtgatcgag gcagcgacga tcgccaaccg agacgatgcg gaactggtcg atggtctgcg
      721 tctcgctttg acccggcgcg gcgtcacctt tctggagggc gtgccggttg cctcggccga
      781 gccaggtccg gtgctggtgc tacgcgacgg gcggcggatt gccggtagcc acctgttggt
      841 cgccgtcggc cggcagccca acgtggaagc cttgaacctg gaggcagcgg ggattgaagc
      901 cagcaagctc gggatcataa cggatcgcgg cctgcgttgc cggagcaaca agcggattta
      961 cgctgtgggc gacattgccg atccgattgg cattgggccg cgggcgttta cccatgtcgg
     1021 cctgtatcat gccggtatcg tcataaggcg ggcactgttc cgcctgccgg ggaaaatcaa
     1081 ttatgcggcg ctgccgcgtg tcacctacac cgatcctgaa cttgcgcaga ccgggatgac
     1141 ggaggcggag gcgaaggcct ccgggcgtcg gattcggatt ttgcgctggc cgatggccga
     1201 gaacgaccgc gcccaaaccg aactggacga gaccggtctg gtgaaactcg tcgtgaaagg
     1261 caaccggatc attggcgccg gtatcctggc acccaacgcc ggcgagatga tcggccaatg
     1321 gacgttggcg atcagccggc gaatcccgtt gtcgtcgctg gcaggactga tcgtgccgta
     1381 tcccacccgg tccgaggcgg gcaaacgcgc agcaggatca ttctacaccg cgaaactatt
     1441 ctccgagcgc accaaggctc tggtccgctt cctgggccgg ttttcccgcc ccgcgaactc
     1501 ccgcaccctg tgacgacgtt ggataggagc aagggcgcct ggcgctcacg atcgtcgccg
     1561 tctcaggccg gcggtccaaa acgtgctgtc ccattcgtgc aaatctgcgg ttaactcttt
     1621 tgccgcccca agctgcagtg actgaccgac gaaaggaatt tatccgcaga tcagaacgga
     1681 tgaacgcaga tccacgcaaa tgcatcagga cactgttgaa atcgctttga gaccggaatg
     1741 cccgtgcttt tcaatacggt gatttcggat cgtctcctcg agggttgaga tatcgtgatt
     1801 ttcgtggtca ggataccagc ctgtccctcc acctcggcgc ggcgcgtata aagtatcaag
     1861 acattatcgg agatagcggc atgtcgatta cctcgtccac ctgggacccg gcgcaatacc
     1921 tgaagttctc caacgagcgc gttcgccccg cgttcgatct gttggcccag gtgccgctac
     1981 agacggcaaa gcatgtggtc gatctgggct gcggcaccgg caacatgacc ggcatcctga
     2041 agcagcgttt tcccgacgcc gacgtactgg gcgtcgacgg cgccgaaacc atgttggcca
     2101 aagctcgaac tgccaacccg ggatgccgtt tcgagcaggg tgacttttct acctggagcc
     2161 cggcgaaccc accggatctg atcttctcca acgccgccct gcactgggtt acgcatcacg
     2221 agtccttgtt ccctcgcctg ctgtccctgc ttgcgccgaa tggcgtcctg gcggtgcaga
     2281 tgccgtccat gcacgatgcg ccgctgcgcg cgttgcagaa tgaggtcgcc cggcagggtc
     2341 cctggtcacg ctacctggat gacgccggtt acgctcgagg attgctgccg gtcgaggcct
     2401 attatgacgt gatccggccg cgggtcgcat cgctggatat ctggcagacc acctatctcc
     2461 acgtactgac gggcgagaat gcggtgaccg agtgggccgc tggcagcagt ctgcggccat
     2521 tcctggacaa gctgccacat gatcaggaga tcgcatttcg ggctgcgtat tcggcggcgt
     2581 tgctgccgca ttatccgcgg cggcccgacg gcaccacact gctgccgttc aagcgattct
     2641 ttttcattgc ccgcatataa acgcgttcag attcagagtt ggttaaccat tggcggttaa
     2701 gcttccctca acaaaagttg tgaggagagc aaaatgccta agtccatcac tctgaccgcc
     2761 ccgagctatc tgccgtcact ggttgggtcg agcctccagg gcaatagttt gctggcgtta
     2821 ttgtcggata agaccggtcg ggccgcagcg accggcgacc ccggcgccgt c
//
LOCUS       DATAVD010000554         2832 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2284138, whole genome shotgun sequence.
ACCESSION   DATAVD010000554 DATAVD010000000
VERSION     DATAVD010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2832
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2284138"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..1152
                     /locus_tag="VHX39_10225"
     CDS             1..1152
                     /locus_tag="VHX39_10225"
                     /EC_number="4.1.1.39"
                     /inference="COORDINATES: protein motif:HMM:NF003252.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-bisphosphate carboxylase large subunit"
                     /protein_id="HEX3991534.1"
                     /translation="MAYDLDLFEEGSIANLTASIIGKVFGFKPLKALRLEDMRIPSHY
                     LKTFQGPATGIVVERERMNIYGRPMLGATMKPKLGLSGRNYGRVVYEALKGGLDFTKD
                     DENINSQPFMHWRDRFLYCMEGVNKASAETGEIKGTYLNVTAATMEDMYERAEFARDL
                     GSVIVMIDLVIGYTAIQSMAKWARRNDMILHLHRAGHSTYTRQKNHGVSFRVIAKWMR
                     MAGVDHIHAGTVVGKLEGDPNVVRGIYDTCREGFVPRDPAHGIFFDQPWASLKKLMPV
                     ASGGIHAGQMHQLLHYLGDDVVLQFGGGTIGHPMGIEAGATANRVALECMVKARNEGR
                     DIWNDGPEILTAAARWCQPLRAALDTWKDVTFNYASTDSVDVLPTPTAS"
     gene            1167..1601
                     /locus_tag="VHX39_10230"
     CDS             1167..1601
                     /locus_tag="VHX39_10230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012569174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose bisphosphate carboxylase small subunit"
                     /protein_id="HEX3991535.1"
                     /translation="MKVTQGLFAFLPDLTDAEISKQIEYALDNGWSLAIEHTDDPHPR
                     NHYWTMWGMPMFDLRDPAGVMMELKACRDANPDIYIKILAFDSNKGFETIRMGFIVQR
                     PQVEPGFELVRAEGPGRSVRYTLRSYATGVPPAERYRAASRP"
     gene            1612..2319
                     /gene="rpe"
                     /locus_tag="VHX39_10235"
     CDS             1612..2319
                     /gene="rpe"
                     /locus_tag="VHX39_10235"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012569175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEX3991536.1"
                     /translation="MTFRIAPSILSADFTRLGEDILTIQQAGAGLIHFDVMDNHYVPN
                     LTIGPLICEAIKPIATVPIDVHIMAAPVDQLALMFAAAGAGIITVHPEATRHLDRTLG
                     LIRDQGCKAGLALNPATPLDYLDHVMRRLDLILVMSVNPGFGGQAFIPHTFEKIASVR
                     RRIDAHTAAGGQPIALEVDGGIKIANIRAVADAGADVFVAGSAIFGARDSDGGVGGVM
                     SALFHELSRPAQTERAA"
     gene            2316..>2832
                     /locus_tag="VHX39_10240"
     CDS             2316..>2832
                     /locus_tag="VHX39_10240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX3991537.1"
                     /translation="MNDTVSPRNDCVDLGALYVESDIAETIATLDRELVGLVPVKTRI
                     REIAALLLVEAARRSMGIQAEPPSLHMSFTGNPGTGKTTVARRMADVLYRLKYIRRNH
                     VVTVSRDDLVGQYIGHTAPKTKEILKKAMGGVLFIDEAYYLYRPENERDYGQEAIEIL
                     LQVMEDNRDDLV"
BASE COUNT          554 a          918 c          870 g          490 t
ORIGIN      
        1 atagcctatg atctcgatct gttcgaggaa ggctcgatcg ccaacctgac cgcatcgatc
       61 atcggcaagg tgtttggctt caagccgctg aaggcgctgc gcctcgaaga catgcgcatc
      121 ccgtcccact acctcaagac atttcagggc ccggcgaccg gcatcgtggt cgagcgcgaa
      181 cggatgaaca tctatggccg acccatgctc ggcgccacca tgaagccgaa gctcggtttg
      241 tcaggccgca attatggccg cgtggtttac gaggcgctca agggagggct cgacttcacc
      301 aaggacgacg agaacatcaa ttcgcaaccg ttcatgcatt ggcgggatcg cttcctctac
      361 tgcatggagg gcgtcaacaa agcctcggcc gaaaccggcg agatcaaggg cacctacctc
      421 aacgtcaccg ccgcgacgat ggaggacatg tacgagcgcg ccgagttcgc ccgcgacctc
      481 ggcagcgtga tcgtcatgat cgacctggtg atcggctaca ccgccatcca gtcgatggcc
      541 aaatgggcca gacgcaacga catgatcctg caccttcacc gtgccggcca ctccacctac
      601 acgcggcaga agaaccatgg ggtttcgttt cgcgtcatcg ccaaatggat gcgaatggcc
      661 ggtgtggacc acatccacgc cggaaccgtg gtcggcaagc tggaaggcga tccgaacgtc
      721 gtgcgcggca tctacgacac ctgccgggag ggcttcgtgc cccgggatcc ggcgcacggc
      781 attttcttcg accagccgtg ggccagcctg aagaagctga tgccggtggc atccggtggc
      841 attcatgccg ggcagatgca ccaattgctg cattacctgg gcgacgacgt cgtgctgcag
      901 ttcggcggcg gcaccatcgg tcatccgatg ggcatcgagg ctggcgccac cgccaaccgg
      961 gtggcactgg aatgcatggt caaggcacgc aacgaaggcc gcgacatctg gaacgacggg
     1021 cccgaaatcc tgaccgccgc cgcgcggtgg tgccagccgc tgcgcgccgc gctcgatacc
     1081 tggaaggacg tcaccttcaa ctacgcctcg accgattcgg tcgacgtcct tcccaccccc
     1141 acggcgtcct gatcgggagc agaaacatga aagtcaccca aggcctgttc gccttcctgc
     1201 cggacctcac ggatgccgag atttccaaac agatcgagta cgcgctggac aacggctggt
     1261 cgctggcgat cgaacacacc gacgatccgc atccgcgcaa ccattactgg acgatgtggg
     1321 gcatgccgat gttcgacctg cgcgatcccg ccggggtgat gatggagctg aaggcctgcc
     1381 gcgacgccaa cccggacatc tatatcaaga tactggcgtt cgacagcaac aagggtttcg
     1441 agacgatccg catgggcttc atcgtgcagc gtccacaggt ggaacccggc ttcgaactgg
     1501 ttcgcgccga aggacccgga cgctcggtgc gctacacgct ccgcagctac gcaaccgggg
     1561 tgccgcccgc cgagcgctat cgcgccgcaa gccggccgtg agcggcccgc catgaccttc
     1621 cgtatcgccc ccagcatcct gtcggccgat ttcacccggc tgggcgaaga tatcctcacc
     1681 atccagcagg ccggcgcggg gttgatccat ttcgacgtca tggacaatca ctacgttccc
     1741 aacctgacca tcggcccgct gatctgcgag gcgatcaaac cgatcgcgac cgttccgatc
     1801 gacgtccaca tcatggcagc gcccgtggac cagcttgccc tgatgttcgc cgcggccgga
     1861 gcggggatca tcacggtgca tccggaggcc acgcggcatc tcgaccgcac gcttggcctt
     1921 atccgcgacc agggctgcaa ggcgggattg gcgctcaatc cggcaacgcc gctcgactat
     1981 ctcgatcacg tcatgcgtcg gcttgacctt atcctggtga tgtcggtcaa tccggggttc
     2041 ggcggccagg cgttcattcc gcacacgttc gagaaaatcg ccagcgtgcg ccggcggatc
     2101 gatgcccata ccgcggccgg cggccagccg atcgcgctgg aggtcgatgg cgggatcaaa
     2161 atcgccaata ttcgtgccgt ggcggatgcc ggcgccgacg tcttcgtggc cggatccgcg
     2221 atctttggcg cgcgtgattc cgatggcggc gtgggcggcg tgatgtcggc gctgtttcat
     2281 gagctctcga gaccggccca aacggaacgc gcggcatgaa tgacacggta tccccacgaa
     2341 acgattgcgt tgaccttggt gcgctttatg tcgaaagcga catcgccgag acgatcgcca
     2401 cgcttgatcg cgagctggtc gggctggttc cggtcaagac ccgcatccgc gaaatcgcgg
     2461 ccttgcttct ggtggaggcc gcccgccgca gcatgggcat tcaggcggag ccgccctcac
     2521 tgcacatgag cttcaccggc aatcccggaa ccggcaagac gaccgtcgcc cggcgcatgg
     2581 cggacgtgct gtaccgattg aaatacatcc ggcgcaatca cgtggtcacg gtgtcgcgtg
     2641 acgatctcgt gggtcagtat atcggccaca ccgcacccaa gacgaaagag atcctgaaga
     2701 aggccatggg cggcgtgttg ttcatcgacg aggcctacta cctctaccgg ccggagaacg
     2761 agcgcgatta cgggcaagag gcgatcgaga tcctgctgca ggtgatggag gacaatcgcg
     2821 acgacctcgt cg
//
LOCUS       DATAVD010000555         3616 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2844198, whole genome shotgun sequence.
ACCESSION   DATAVD010000555 DATAVD010000000
VERSION     DATAVD010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3616
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2844198"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..353)
                     /locus_tag="VHX39_10245"
     CDS             complement(<1..353)
                     /locus_tag="VHX39_10245"
                     /inference="COORDINATES: protein motif:HMM:NF039330.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6036 family nucleotidyltransferase"
                     /protein_id="HEX3991538.1"
                     /translation="MVGTGAVIATAKHIPVIMMMTEEIDIYVENVADPDLVSDLIDAS
                     IGRDSQFHRTFGYYGDGVSERTAVMPLTWRTRASEYTTPDGLATAVCPSAEDIAIAKL
                     CAWREKDQAWLREAFR"
     gene            complement(409..735)
                     /locus_tag="VHX39_10250"
     CDS             complement(409..735)
                     /locus_tag="VHX39_10250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991539.1"
                     /translation="MTMRFHDRHEWIDFLKASEVARRILADTSMIADAKKFVAQRMAP
                     DPHQREYTLMWQELLSRSPAEIAAALTEDSPRGRLLRETRPVFGKGLTSREIADLIAH
                     PDVAAP"
     gene            1167..2744
                     /locus_tag="VHX39_10255"
     CDS             1167..2744
                     /locus_tag="VHX39_10255"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S53 family peptidase"
                     /protein_id="HEX3991540.1"
                     /translation="MAHQPLKGSERQSLRGAKAVGKADPTERLEVSVLLRRSNADALK
                     DRVSKLARRESAGEHLTREAFAQQFGAHDDDIAAVRRFARTHNLAVVQEHAGRRTMVL
                     SGTVAQYNAAFGVDLQRFEYPGGSYRGRTGPVQIPEELQGSVEAVLGLDNRPVAMPHF
                     RTHRPSGNVHWHAGAGNATSYTPLQVASAYGFPAGTGKGECVAIIELGGGERTSDLTT
                     YFSGLGLTQSPKVMALSVDHGKNHPTGDANGPDGEVMLDIEVVGAVAPQAHIAVYFAS
                     NTDAAFLDAITTAIHDTTNKPSVISISWGKAESTWTQQSMTAFDAAFQDAATMGITVC
                     VASGDNGSSDGVTDGANHVDFPASSPHALACGGTNLQISGNSITGETVWNDGNGGGSG
                     GGGVSSFFPLPAWQDGLQATLTSGGSSALTNRGVPDVCGDADPESGYDVRIDGTDTVI
                     GGTSAVAPLWAGLIARINANNGKPAGFINPKLYAAQGAFHDITEGNNGSFAAAKGWDA
                     ATGLGSPIGSAVETALR"
     gene            3080..3338
                     /locus_tag="VHX39_10260"
                     /pseudo
     CDS             3080..3338
                     /locus_tag="VHX39_10260"
                     /inference="COORDINATES: protein motif:HMM:NF019974.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate- and nitrite sensing domain-containing
                     protein"
     gene            3408..>3616
                     /locus_tag="VHX39_10265"
     CDS             3408..>3616
                     /locus_tag="VHX39_10265"
                     /inference="COORDINATES: protein motif:HMM:NF019974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate- and nitrite sensing domain-containing
                     protein"
                     /protein_id="HEX3991541.1"
                     /translation="MQGITGAEWFNAATARMDLMKQVEDRLATDLSAFASRAVGAAIR
                     RRQTAGPDNRSPAPLRKPYPIPRNSV"
BASE COUNT          690 a         1114 c         1136 g          676 t
ORIGIN      
        1 cgaaacgcct cgcgcagcca agcctgatcc ttctcccgcc aggcgcagag tttggcaatg
       61 gcaatgtctt cggcgctggg acaaaccgcg gtcgcgaggc catccggcgt cgtgtactcg
      121 ctcgcgcggg tgcgccaggt cagcggcatg accgcggtcc gctcgctaac tccgtcgccg
      181 tagtaaccaa acgtgcggtg gaattgtgag tctcgcccga tcgacgcgtc gatcaggtcg
      241 gagaccaggt cagggtcggc aacgttttcg acataaatgt cgatctcctc ggtcatcatc
      301 ataatgacgg ggatgtgctt cgcagtggcg atgaccgcgc cggtaccgac cattacgaat
      361 cggctgtatc ctgacagcga agcggcggcg cgcaaaatgt ggtcgatgtc agggcgccgc
      421 aacatccggg tgcgctatca ggtcggcgat ctcccgagag gtcaggcctt tgccgaatac
      481 cggtcgggtt tcccgtaaca gtcggccgcg cgggctgtcc tcagtcagcg ccgcggcgat
      541 ctcggcaggt gatcgcgaca gtaactcctg ccacatcaag gtatattcgc gctggtgcgg
      601 gtcgggtgcc attcgttgcg caacaaactt tttggcgtcc gcgatcatcg acgtgtcggc
      661 caaaatccgg cgcgccactt cgctggcttt caggaagtcg atccactcat gcctgtcgtg
      721 aaagcgcatg gtcatggtcg catattaccg gctgaccgcc ggaccgcgca acaaccttgc
      781 actgctcccc gcggtccggt cgcgcccgct aaattggctg gcccggagcc gcccgggttc
      841 gacgtcaccc tgatcgagtg acagcgtccg atcggttgcc gtgtcacgcc attcaaatag
      901 catcacggac cggtgattga ttgcgacccg cgggaacgtg cgatcaacga tgacgtcgtc
      961 gaaaaatgcg gagtttcgcc ggtttggtag cgcatccaat ctgatcagat gctaattcca
     1021 cgtgaaacgt ccagcaatgc cgccccatcg caacgcatcc atcataaatc atcaaaatcg
     1081 acttgtctgt gatctggctc acagctatgt ccagctgttg tgacctatag cacaactccc
     1141 cacatcgcag tgggagggag aaacctatgg cacatcaacc actcaaaggc agcgagcgcc
     1201 aatcattgcg gggggcgaag gccgtcggca aggccgatcc taccgagcgg ctcgaggtct
     1261 ccgtactgct ccgccgaagc aatgccgatg cgttgaagga ccgagtaagc aagctggcca
     1321 ggcgagagtc cgccggcgag catctgaccc gtgaagcatt cgctcagcaa ttcggtgccc
     1381 acgacgatga catcgccgcc gtcaggcggt tcgcccgcac gcacaacctg gctgttgtgc
     1441 aggaacacgc cggccggcgg acgatggtgc tctctggcac ggtcgcccag tacaacgccg
     1501 cgtttggcgt ggacttgcag cggtttgaat atccgggcgg gtcgtatcgc ggccggaccg
     1561 ggccagtgca aatccccgag gaattgcaag gcagtgtcga agcggtgctc ggactggaca
     1621 accggccggt cgcgatgccg catttccgca cccaccggcc aagcgggaat gttcattggc
     1681 acgccggcgc cggtaatgcc acgtcgtata cgccgcttca ggttgcctcg gcctacggtt
     1741 tcccggccgg caccgggaag ggcgaatgcg tcgccatcat cgaactgggc ggcggcgaac
     1801 ggacttcgga tctgacaacc tatttctccg gcctcggcct gacccagagt ccgaaggtca
     1861 tggctttatc ggtggatcac ggtaaaaacc atccgaccgg cgatgcgaac gggccggatg
     1921 gcgaggtcat gctcgacatc gaagtggtcg gcgcggttgc cccccaggcc cacatcgcgg
     1981 tttatttcgc aagcaatacg gatgccgcgt tcctcgacgc gattaccacc gcgatccacg
     2041 acacgacaaa caagccatcg gtcatctcga tcagttgggg caaggccgaa tcgacctgga
     2101 cgcagcaatc gatgacggcg tttgacgcgg cgttccagga cgccgcaacc atgggcatca
     2161 ccgtttgcgt ggcgtcgggc gataacggat cgagcgacgg cgtgaccgac ggcgcaaatc
     2221 acgtcgactt cccggcctcg agcccgcatg cattggcttg tggcggcacc aacctgcaga
     2281 tctccggaaa ttcgatcacc ggcgaaacag tctggaacga cgggaacggg ggcggttctg
     2341 gcggcggtgg cgtcagctcg ttcttcccgc tgccggcctg gcaagacggg ctgcaggcga
     2401 cgctgacatc cggaggcagt tcggcactga ccaaccgcgg tgtgccggat gtttgtggcg
     2461 atgccgatcc ggagagcggc tatgacgtgc gcatcgacgg aaccgacacg gtgatcggcg
     2521 ggaccagtgc tgtcgcccca ctttgggctg ggctcatcgc gcgcatcaat gcgaacaacg
     2581 gtaagccggc cgggttcatc aatccgaagc tgtatgcggc gcagggtgcg ttccatgaca
     2641 tcaccgaagg caacaacggg agttttgccg cggcgaaagg ctgggatgcg gccaccggac
     2701 tcggcagtcc aatcggctct gcggtcgaga cagcgctccg gtaacacgac gtggcgggcg
     2761 gcatgacctg ccgcccgcct atcgcgccgg ctcggggatg gggttcggcg gtccgcactt
     2821 cggcccgcga aaaataactc tttgtttacg tcgttttccg ataaccgttg cggtccgact
     2881 ctggcgtcgg gccgtggagc ggtgctgttc gatgcaggtg ttacgaggtc tcggacgcga
     2941 taccccgatc gctctgcgaa tgggcttcaa cgtcgccatt ccggtgctga ctgcggcggt
     3001 gcttggcttg cttgtcgtcg gctcgctttg gaaaaccgcc gcagtcatgg aacgtcttcg
     3061 cgtgctcagc cagttcagca tgcggatcgc cggccttgtg ctggaactgc aaaaggagcg
     3121 cggcctttcc gcgatcttcg tcagcagtaa cggacaacaa ctcgccaccg aattgtcgcg
     3181 tcagcgtgag ctctccgaca cgcagatcgc cgctgtgcaa tcgatggcac agggcatggc
     3241 attaaaagac cattcgcgcg aactccgcgc ggttattgca agcgaccttg gcggactggc
     3301 ggatatcacc gctgcgcgcg ccgatatcac tgcgcgacgc ctcgacggtc cggcaacact
     3361 ggcaatttac accggggtca ttggccggct gctttcggtg cgacggcttg caggggatta
     3421 cgggtgcgga atggttcaat gcggctaccg cacggatgga tttgatgaag caggtcgagg
     3481 accggcttgc aaccgacctc agtgcgttcg cgagccgggc tgtcggggcg gcgatcaggc
     3541 gccgccaaac cgcgggtccg gataatcgat cacctgcacc tcttcggaaa ccgtatccaa
     3601 taccgcgcaa ctcagt
//
LOCUS       DATAVD010000556         3231 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3403516, whole genome shotgun sequence.
ACCESSION   DATAVD010000556 DATAVD010000000
VERSION     DATAVD010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3231
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3403516"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1138)
                     /locus_tag="VHX39_10270"
     CDS             complement(<1..1138)
                     /locus_tag="VHX39_10270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3991542.1"
                     /translation="MTAVAELDQLSDDAFRAHVRGWIEANYPPELRNPPRRLHFNENK
                     AWYMKLAEQGWLCPNWPKEFGGMGISAWKQLIFLEEKERHGCSRLNDMGMTMIGPLLI
                     RFGRPDQQQYFLPKIRAGEHIWCQGYSEPNAGSDLASLRTEAVLDGDHWVVNGQKIWT
                     SLAMDANWIFLLVRTDKQAKKQEGISFLLVPMDTPGITVRPITNIDMADEFCETFFDN
                     VRVPRENIVGDINKGWTMAKALLGFERIGSGSPRQASYALQRLKLLAERMGVWDDDDF
                     RQRFTRLRLDLEDHKDLYETFVEKVRRREALGPDVSMLKVHQTELYQRITETMLDIAG
                     EYGAGIGPLEGNQELNPAGLFLQSRPASIYAGSNEIQRNILARNV"
     gene            complement(1186..1611)
                     /locus_tag="VHX39_10275"
     CDS             complement(1186..1611)
                     /locus_tag="VHX39_10275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX3991543.1"
                     /translation="MTQDPDRFARTLVDGMPDAIVFADAAGMIQFWNRGAERMFGFSE
                     VEAQGQALDIIIPGSLRNRHWQGFRETMRTGETRYGDGQILAVPAVRKDGTRLSVEFT
                     IVPFTGDDGRITGIAAIMRDVTARFEELRALRQQLAARP"
     gene            complement(1595..2200)
                     /locus_tag="VHX39_10280"
     CDS             complement(1595..2200)
                     /locus_tag="VHX39_10280"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEX3991544.1"
                     /translation="MMDPEIAAWRRRQRTTLLGRREAMPLEARQDAAQSVAARLSAHV
                     AASRYSSIGLYWPIKHEINLLSWAQALARQSGIVLCLPVVVERKAPLEYWRWQQGEPL
                     GRGIWDIPIPAARDVVLPDLMLAPLVGFDRANYRLGYGGGYFDRTLASLARRPMVIGI
                     GYEFGAQDSIFPQPHDIPMDAVMTEQRCTLPQEGGNHDTGP"
     gene            complement(2197..2649)
                     /locus_tag="VHX39_10285"
     CDS             complement(2197..2649)
                     /locus_tag="VHX39_10285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011252430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEX3991545.1"
                     /translation="MRLTAYTDYTLRTLMYLAVNDASLATIAGIAGTYRISETHLMKV
                     VHQLGMAGDIETIRGRNGGLRLNRPADAINLGTVVRRTEEDMDLVSCFDGSAVCAISE
                     ICVLQAVLHEALAAFLAVLDRFTLADLVAPRARLTTLLGITAPQGRQE"
     gene            complement(2654..>3231)
                     /locus_tag="VHX39_10290"
     CDS             complement(2654..>3231)
                     /locus_tag="VHX39_10290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="group III truncated hemoglobin"
                     /protein_id="HEX3991546.1"
                     /translation="EVDYTTNVNATARLANLQAGALDLVVRWILDIALRVMPPYKMYL
                     RSFLRLPMDITAPPLADTVTESSIVLLIDRFYAAVRRDPVLAPVFEGAIGEAEWPEHL
                     ETMRRFWSSVMLTSGRYSGNPVAVHRAVRGLERPMFARWLALFEATVHDLFTARPAAE
                     FVTKANRIATSLQIALFHRPGLPPDGLAPRA"
BASE COUNT          599 a          995 c         1028 g          609 t
ORIGIN      
        1 gcacgttccg ggccaggata ttgcgttgaa tttcgttcga accggcatag atcgaggctg
       61 gccgcgattg caggaacagc ccggccggat tgagttcctg attgccttcc agcggcccga
      121 tgccggcgcc gtactcgccg gcgatgtcga gcatggtttc ggtgatgcgt tggtacagct
      181 cggtctgatg cactttcagc atcgacacgt cggggccaag cgcttcccgc cgccgcacct
      241 tttcgacaaa cgtctcatac agatccttgt gatcttccag atcgagccgc agccgcgtga
      301 agcgttgccg gaaatcgtca tcgtcccaca cgcccattcg ttccgccaac agcttcaatc
      361 gttgcagcgc atacgacgcc tgccgcggcg agccggaacc gatccgctca aagcccagaa
      421 gggccttggc catggtccag cctttgttga tgtcgccgac gatgttttcc cgcggcaccc
      481 ggacattgtc gaagaacgtt tcgcagaatt cgtctgccat atcgatattg gtgatcgggc
      541 gcacggtgat gccgggtgta tccatcggca cgaggaggaa gctgatgccc tcctgcttct
      601 ttgcctgttt gtcggtgcgc acgagcagaa aaatccagtt ggcgtccatc gccagcgagg
      661 tccagatctt ttgcccgttc acaacccagt gatcgccatc gagcactgcc tcggtgcgca
      721 acgaggcgag atcggaaccg gcattcggct cgctgtagcc ctggcaccag atgtgctctc
      781 cggcgcggat cttcggcagg aaatattgtt gctgatcggg ccggccgaaa cggatcagca
      841 gcgggccgat catggtcatg cccatgtcgt tcagcctgga gcaaccgtgg cgctcttttt
      901 cctccaggaa gatcagttgc ttccaggcgg agatgcccat gccgccgaat tccttcggcc
      961 agttcgggca gagccagcct tgctcggcca gcttcatata ccaggccttg ttttcattga
     1021 aatgcagccg gcgcggcgga ttgcgcagtt cgggcggata gttcgcctcg atccagccgc
     1081 ggacatgggc gcggaatgcg tcgtctgaga gttggtcgag ttcggcaacg gcggtcatgg
     1141 gcctctcccc tataccgcga tcgtagccgt tccggccgct ttcggctacg ggcgcgcggc
     1201 gagctgttgg cgcaacgccc ggagttcctc gaagcgtgcc gtgacatcgc gcatgatcgc
     1261 ggcgatgccg gttatgcgcc cgtcatcgcc ggtaaacggc acgatggtga attcgaccga
     1321 tagccgcgtc ccgtccttgc ggaccgccgg caccgccagg atctggccgt cgccgtaacg
     1381 ggtctcgccg gtgcgcatgg tttcccggaa gccctgccaa tggcggttgc gcagactgcc
     1441 agggataata atatcgagcg cctggccctg ggcttcgacc tcggaaaaac cgaacatgcg
     1501 ttcggcgcca cggttccaga actggatcat gccggctgca tcggcgaaca cgattgcgtc
     1561 cggcatccca tccaccaggg tgcgagcgaa acggtcaggg tcctgtgtca tggttgcctc
     1621 cttcttgcgg caacgtgcat cgttgctcgg tcatcacggc atccattgga atgtcgtgcg
     1681 gttgcggaaa gatgctgtcc tgggctccaa actcgtagcc gatgccaatg accatcgggc
     1741 gccgcgcaag cgaggccagg gtgcgatcga aatacccgcc gccataacca agccggtagt
     1801 ttgcgcgatc gaagccgacc aatggcgcca gcatcaggtc gggaagcacg acgtctcggg
     1861 cagccgggat gggaatgtcc cagatgccgc ggccaagcgg ctcgccttgt tgccagcgcc
     1921 agtattccag cggcgctttc cgttcgacga ccaccggcag gcaaagcacg ataccgcttt
     1981 gccgggccaa cgcctgagcc caggagagga ggttgatttc gtgtttgatg ggccagtaga
     2041 ggccgatgct ggaatagcgc gaggccgcga cgtgtgcgct cagtctggcg gcgacggatt
     2101 gggcggcgtc ttggcgagcc tccagcggca ttgcctcgcg cctgccgagc agcgtcgtgc
     2161 gctgccggcg tcgccaggcc gcgatctcgg ggtccatcat tcctgtcggc cttgcggcgc
     2221 ggtgatcccc agcaatgtgg ttaaccgggc gcgtggggcg acgaggtccg ccagggtaaa
     2281 gcggtcgagc acggccagga atgcggcgag cgcctcatgc aagacagcct gcaacacgca
     2341 gatttcgctg atggcacaga cagcagagcc gtcgaagcag gaaacgaggt ccatatcctc
     2401 ctcggtacgc cgaaccaccg tgccgaggtt gatggcgtcg gccggccggt tgagacgcaa
     2461 gccgccattt ctgccgcgga tcgtctcgat gtcgcccgcc atgcccaatt ggtgcacgac
     2521 tttcatgagg tgggtttccg aaatccgata ggtgccggcg atcccggcaa tggtcgccag
     2581 cgaggcgtca ttgaccgcga gatacatcaa ggtccgcaac gtgtagtcgg tataggcggt
     2641 gagccgcatg gcgtcaggcc cgtggcgcca ggccgtcggg cggtaagcca ggccgatgga
     2701 acagtgcgat ctgcaggctg gtggcaatcc ggttcgcctt ggtgacgaac tccgctgccg
     2761 gccgcgccgt gaacagatca tgcaccgtgg cctcgaacag cgcgagccaa cgggcaaaca
     2821 tcggccgttc caggccacga accgcacggt gcacggcaac cggattaccc gaatagcggc
     2881 cggaagtgag catgaccgag gaccagaacc ggcgcatggt ctccagatgc tcgggccatt
     2941 ccgcttcgcc gatcgcgccc tcgaacacgg gcgccagtac cgggtcgcgg cgtacggcgg
     3001 cgtaaaaacg gtcgatcagc agcacgatgg aggactcggt tacggtgtcg gcgagcggtg
     3061 gtgcggtgat atccatgggg agcctcaaga acgatcggag gtacatctta tagggtggca
     3121 tgacgcgcaa agcaatatcc aaaatccatc ttacgaccag atccaaagcg cccgcctgca
     3181 ggttcgccaa ccgggcggtg gcattcacgt tcgtggtata atccacctca t
//
LOCUS       DATAVD010000557         1882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1914895, whole genome shotgun sequence.
ACCESSION   DATAVD010000557 DATAVD010000000
VERSION     DATAVD010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1914895"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            313..921
                     /locus_tag="VHX39_10295"
     CDS             313..921
                     /locus_tag="VHX39_10295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX3991547.1"
                     /translation="MFHQGSHHKHGKRFARGELRHQDGRHSDHHHGRGRHRHGDWSSN
                     PTDRDLRRFFAHGDLRLVILRLIADKPRHGYEIIKEIEERVAGAYSPSPGVIYPTLTL
                     LEELGYVAVSPGEGARKLHTITEAGQAFLAANGPAVDALLSRMEEANAARGGRPAPQI
                     VRALENLKLALRLRLGRGPLTDDQVTAMAAALDTAAITVEQT"
     gene            1000..>1882
                     /locus_tag="VHX39_10300"
     CDS             1000..>1882
                     /locus_tag="VHX39_10300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX3991548.1"
                     /translation="MGVTSQLADFCANIKLAALPPEVVTRARFLVLDLVGNIVRARHD
                     AESTGSFVATVRSLGMASGNAGVFGDAARYSPVGAAFLNGALAHSLDFDDTHAAGSLH
                     PGAPVIPAALAAGEMAGASGADVLAAIIAGYEVTCRVALALPAGEHYDRGFHPTATCG
                     AFGAAAAAARVFGLDADGVAGAMGTVLSQTAGSLQFLANGAWTKRSQVGWAAVNGLMA
                     ATLVREGFKGASEALEGKHGFMHAYAPSPKPERAVQDLGAVFELMNTAVKPYPSCRYG
                     HAGIDAALALRAANDLQP"
BASE COUNT          335 a          621 c          584 g          342 t
ORIGIN      
        1 cgagaatact gtgcgtggga tgccggacct gggctcccgg gtttggcgag cgcaccggca
       61 tcgtcgctca accgcgatca atgttccgcc gtcgttcatc ccggacctgc gcggtgcagc
      121 gggctgccca caggccgccc ccgattttga gcttgtcctc aatacggaca tcgcacgggc
      181 atctggctgc ccggtgcggc gaaccgcccc gtctcagaaa atttctcccc ttgtcggcac
      241 tcggatgctt gacatcgagt gtatctcgat atatctgttt ttccgttata tcgaaaccac
      301 tctggagaac acatgttcca tcaaggctcc caccacaaac acggcaaacg cttcgccaga
      361 ggcgaacttc gccatcaaga cggacgccac tccgaccacc accacggccg cggccgacac
      421 agacatggtg actggtcgtc aaacccaacc gaccgtgacc tgcgccgctt ctttgcgcat
      481 ggcgatctac gcctggtcat cctgcggctg atcgccgata aaccgcgcca cggctatgaa
      541 atcatcaaag agatcgaaga gagagtggcc ggagcgtaca gccccagccc aggagtcatt
      601 tatccaactc tgacgctgct tgaagaactc gggtacgtcg ctgtcagtcc cggcgaaggc
      661 gccaggaaat tgcacacgat taccgaggcg ggacaggctt tcctcgccgc caacgggccg
      721 gccgtggacg ccctgctttc tcgcatggaa gaggcgaacg cggcgcgcgg gggcagacct
      781 gccccgcaga tcgtcagggc gttggaaaat ctcaaactcg cgttgcggct acgcctcggg
      841 cgaggtccgt tgaccgacga ccaggtgact gccatggccg cggcactgga caccgctgcc
      901 atcacggttg agcaaacgtg actgagcctc aggccaaacc cttccctgac gagttttttt
      961 ccgccacact cgcgtgaaat accggaggtc ccgttcgcca tgggcgtcac cagccaactt
     1021 gctgatttct gtgccaacat caaattggcc gcgctgccgc cggaggttgt gacgcgcgcc
     1081 cggttcctgg tcctggacct ggtcggcaac atcgtccgcg cgaggcacga cgccgagagc
     1141 accggctcat tcgtagcgac ggtgcgttcc ttgggtatgg catccggcaa tgccggtgtg
     1201 ttcggcgatg ccgcgcgcta cagcccggtc ggcgccgcat tcctgaacgg agcgctggcg
     1261 cactcgctgg acttcgacga cacgcatgcc gccggctcct tgcatcccgg cgccccggtg
     1321 atcccggcgg cgctggcagc aggtgagatg gcgggcgcgt cgggtgccga cgtactggcc
     1381 gccattattg cgggctacga ggtcacatgc cgcgttgctt tggccctgcc ggccggcgaa
     1441 cattatgacc gtggcttcca ccccaccgcc acctgcgggg cttttggtgc cgctgcagca
     1501 gcggctcgtg tgttcggact ggacgctgac ggtgtcgccg gagcgatggg caccgtgctg
     1561 tcgcaaaccg ccggcagcct acaattcctc gccaatggcg cctggaccaa acggtcccag
     1621 gtcgggtggg cggcggtcaa cggcctgatg gcggcgacct tggtgcgcga gggcttcaaa
     1681 ggcgcgtccg aagcgctcga gggcaagcac ggctttatgc acgcctacgc gcccagcccg
     1741 aaacccgagc gcgccgtgca agatctcggt gcagtgttcg agttgatgaa cacggcagtg
     1801 aagccctacc cgtcgtgccg ttacgggcat gccggtatcg acgcggcgtt ggcgttgcgt
     1861 gcggcaaacg atttacagcc gg
//
LOCUS       DATAVD010000558         2518 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1915128, whole genome shotgun sequence.
ACCESSION   DATAVD010000558 DATAVD010000000
VERSION     DATAVD010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2518
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1915128"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1266)
                     /locus_tag="VHX39_10305"
     CDS             complement(<1..1266)
                     /locus_tag="VHX39_10305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEX3991549.1"
                     /translation="MPSPSSPIPAGATPAMAQWFAAKAEHPDALLFFRMGDFYELFFS
                     DAEAAAAALDIVLSHRGEHNGVPIPMCGVPKHAAEAYLARLIRRGYRVAVAEQIEDPK
                     QRASTKTPIKREVVRLITPGTLTEEALLEAGQPNLLLALSRDRDDVGAAWLDISTGVF
                     ETAALTLTDLPALLGRLEPAEIIAPETLPLDEWSARRSPETLPSPPLVARRRLADLFQ
                     TASLDAFGTFSDAEAVAAMLAVDYVRSTQAGALPRLARPTPMGDAAVMALDAATRASL
                     EIHRARDGGILHTLLASVKQTVTPAGARLLGAWLAAPLTDPLTITARQDAWSWMLANP
                     QATIHLRATLRTTPDVARSLGRLSLNRGGPRDLAAVHDTLAAAREAAASLEGPLPEAL
                     SSCRSILAQELPILATLIAALTDPAPLRVD"
     gene            complement(1319..2101)
                     /locus_tag="VHX39_10310"
     CDS             complement(1319..2101)
                     /locus_tag="VHX39_10310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="short-chain dehydrogenase/reductase"
                     /protein_id="HEX3991550.1"
                     /translation="MELNLRGRTALVTGASKGIGLASAEALASEGVNVILVSRTQADL
                     DAARDSIMRRWNVNVQVHAYDLSNSSNIDKLLAEHAGIDILVNNAGAIPAGDLQQVTE
                     DRWRQAWDLKVFGYINMCRRFYADMKSRGRGVIINVLGVAGEKMDRTYIAGSTGNAAL
                     MAFTKALGGSAGDDKLRVVGINPGAIATDRLITIMKARALDRLGDENKWEDLMKPLPM
                     GRAGTPEEIGVMVAFLASDISAYTTGTIITIDGGAANRGPMF"
     gene            complement(2117..>2518)
                     /locus_tag="VHX39_10315"
     CDS             complement(2117..>2518)
                     /locus_tag="VHX39_10315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3991551.1"
                     /translation="VAERVPARAWPLPRLLDLFPALRERARNRGANLSGGEQQMLAIA
                     RALVSDPKVLLLDEPSQGLAPLVVRELAGVIRKLRDENVTILLVEQNMKLAEAVADEL
                     HVMVKGRMVYAATPERFRAEEQEIRSRYLTV"
BASE COUNT          446 a          772 c          842 g          458 t
ORIGIN      
        1 atcgacccgt aacggtgccg gatcggtcag ggccgcgatc aacgtggcaa ggatcggcaa
       61 ttcttgcgcc aggatcgagc ggcacgacga taatgcttcg ggcaatggac cttcgagcga
      121 tgccgctgcc tcgcgcgcag cagccagcgt atcgtgcacg gcagcgaggt ctcggggacc
      181 gccgcggttc agcgacaagc ggccaagcga gcgtgcgaca tctggcgtgg tgcgcagggt
      241 ggctcgcagg tggattgtcg cctgcgggtt cgccagcatc caggaccagg catcctgccg
      301 cgccgtgatc gtgagcggat cggtcaatgg tgccgccaac catgctccaa gcaggcgcgc
      361 gcctgcagga gtcacggtct gcttcaccga ggccagcagc gtgtgcagga tcccaccatc
      421 acgggcacga tggatctcga ggctggcgcg ggtcgcggca tccagggcca tcaccgcggc
      481 atcacccatc ggcgtcggcc gagccaatct gggcagagca ccggcctgcg tcgatcgcac
      541 ataatcgacg gcgagcattg ctgccacggc ttcggcatca ctgaaggtgc cgaacgcgtc
      601 gagactggcg gtctggaaca aatcagccag ccgccgccgc gcgaccagcg ggggtgatgg
      661 cagggtttca gggcttcgcc gtgcactcca ctcgtcaagc ggcaacgttt cgggggcgat
      721 gatttcggcg ggttcgagac ggccaagcaa cgccgggaga tcggtgagcg tcagcgcggc
      781 ggtctcgaat acaccggtgg aaatgtcgag ccacgccgca ccgacatcgt cacggtcgcg
      841 cgacagagcg agcagcagat tgggctggcc agcttccagc aacgcttcct cggtcagcgt
      901 gccgggggtg atgaggcgga ccacctctcg cttgatcggt gtcttggtag aggcacgctg
      961 cttcgggtcc tcgatctgtt cggcgacggc gacccggtaa ccgcggcgga tcaggcgggc
     1021 gagataggct tcggcagcgt gcttcgggac accgcacatg gggatcggga cgccgttgtg
     1081 ctcaccacgg tgggacagca cgatgtcgag cgcggcggcc gcggcctcgg cgtcggaaaa
     1141 gaacagttcg tagaaatccc ccatgcggaa gaacagcaac gcatcgggat gctccgcctt
     1201 ggcggcaaac cattgtgcca tggcgggagt ggcaccggcc gggatgggcg aagacggaga
     1261 gggcatctgg ctggtttagc gtggttcagc acgccatggg tatgggccgt tcggtggctt
     1321 agaacatcgg tccgcggttc gccgcgccac catcgatcgt gatgatcgtt ccggtggtgt
     1381 aagcggaaat gtccgaggcc agaaacgcaa ccatgacgcc gatttcctcc ggcgtgccgg
     1441 cgcggcccat gggcaggggt ttcatcaggt cttcccattt gttttcgtcg cccaatcgat
     1501 cgagggctcg ggctttcatg atggtgatga ggcggtcggt ggcgatggca cccggattga
     1561 tgccaacgac ccgtagtttg tcatcgcccg ccgagccgcc cagtgccttg gtgaacgcca
     1621 tcagggccgc gttgccggtc gagccggcga tgtaggtgcg gtccatcttt tctccggcca
     1681 caccgagcac attgatgatg acgccgcggc ctcgcgattt catgtcggca taaaaccgcc
     1741 ggcacatgtt gatatagccg aagactttca aatcccacgc ctgccgccag cgatcttcgg
     1801 taacctgttg cagatcgccg gccggaatgg caccggcgtt gttgaccaga atgtcgatgc
     1861 cggcatgttc ggcaaggagt ttatcgatgt tactggagtt ggaaaggtcg taggcgtgca
     1921 cctgaacatt gacgttccag cggcgcatga tgctgtcgcg tgcggcgtcc aggtcggcct
     1981 gcgtgcggga caccaggatc acgttgaccc cttcggaggc aagcgcctcg gcgctggcaa
     2041 ggccaatgcc tttggatgcc ccggtcacca gcgcggtccg gccgcgaaga ttgagttcca
     2101 tctctgcctc cctgtttcaa accgtcagat agcggctgcg aatttcctgt tcttcggcgc
     2161 ggaaccgttc cggtgtcgcg gcgtagacca tgcggccttt gaccatgacg tgcaattcgt
     2221 ctgccaccgc ttcggcgagt ttcatgttct gctcgaccag cagaatggtc acgttttcat
     2281 cacgcagttt ccggatgacc ccggcaagtt cgcgcaccac cagaggcgcc aggccctggc
     2341 tgggttcgtc caatagcagc actttcgggt cggacaccaa agcgcgcgcg atcgccagca
     2401 tctgctgctc gccgcctgaa agattggcgc cgcggttgcg cgcccgttcc cgcaatgccg
     2461 gaaacaggtc cagcagtcgc ggcagcggcc aggcgcgggc gggaacccgt tcggcaac
//
LOCUS       DATAVD010000559         7477 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_982383, whole genome shotgun sequence.
ACCESSION   DATAVD010000559 DATAVD010000000
VERSION     DATAVD010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7477
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_982383"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..791)
                     /locus_tag="VHX39_10320"
     CDS             complement(<1..791)
                     /locus_tag="VHX39_10320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005436 - sodium:phosphate symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015114 - phosphate ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0035435 - phosphate ion transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0044341 - sodium-dependent phosphate
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi symporter"
                     /protein_id="HEX3991552.1"
                     /translation="MDFPVTLLDLAGTIALLLWGVHMVQTGIQRSFGPKLGLVLAAAL
                     RNRVRAFMAGVGVTACLQSSTATGLMLTGFAAGGFVELIPALAVMLGANVGTTLIVQV
                     LSVNITGLAPCLFLIGLVMFNRGDATRTRDLGRVAIGLGLMLLSLHQLLEVITPYEDV
                     PSLRMFMGAIATQPVLALLLAAVITWAAHSSVAIVLLVMSFAAKGVIPPEAAFALVLG
                     ANFGTAINPLLEGVSGGDPAAKRLPIGNLANRALGCAVGLALLPV"
     gene            complement(929..1918)
                     /locus_tag="VHX39_10325"
     CDS             complement(929..1918)
                     /locus_tag="VHX39_10325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine kinase"
                     /protein_id="HEX3991553.1"
                     /translation="MTEIRFDILGIGNAMVDVTTRVEDTFLSRHDMHKGAMILVDAAA
                     AETLYGAMPPGIESSGGSAGNTCAVAATLGSRVAYLGKVADDQLGDVFAHDLSALGVH
                     FPSARLTGGAPTARCLILVTPDGQRTMNTYLGACVTFGEADVDEELVAAASVTYLEGY
                     LFDPPAAQAAFRAAAAAAHRAGRQVALSLSDAFCVDRHRAAFRDLVSGHVDILFANET
                     EITSLYEKNSFDEAAEAARAEVALAALTRSEAGSVILRGTETVTIAAEPAKVVDTTGA
                     GDAYAAGFLAGWTAGRPLLACGRMGSLAAAEVISHYGARPEADLQALVARALG"
     gene            complement(2185..3363)
                     /locus_tag="VHX39_10330"
     CDS             complement(2185..3363)
                     /locus_tag="VHX39_10330"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX3991554.1"
                     /translation="MKLAKFENLHCDAGWRTFSFLKVTTDDGLVGWSEYTEADGSRGL
                     SAVIQGMAEGLIGLDPRPVQSIDSLLYVRQVQAPNGVNQRAIAAIENALLDIKGKALG
                     VPVYELFGGPVRTRIPVYWSHCGTYRVRNHELVGVPPLKNYDDVAALGREVRERGFKA
                     LKTNILPYENGRLVSFGPGFGRTPGHPELNADRKTLQAVRDTLAAFRSGAGPEMGLHL
                     DVNYHFKTEGFLQVAKAVAPYDMTWLEIDTWDPQSLALIRRQAPCPIASLESVTGRRA
                     FRPFFDAYATDVAIIDVIWNGFLESIKIAAMAEAYEVNCAPHNYYGHLCSAVSAHFCA
                     VVPNFRVMEIDIDSVAWRDELFINAPKIVDGDLILPTGPGWGVEVDEAAVRARPPKGR
                     "
     gene            3446..4135
                     /locus_tag="VHX39_10335"
     CDS             3446..4135
                     /locus_tag="VHX39_10335"
                     /inference="COORDINATES: protein motif:HMM:NF018917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EI24 domain-containing protein"
                     /protein_id="HEX3991555.1"
                     /translation="MTPLLLPLSRALTQLTDPALLGVVWRSVLFSGLFFAAILIGTIG
                     AVHHFVTAGGIVAWALDALGSIAAAVLAMWLFLPVAAVIGTLYFERIARAVERVYYPS
                     LPPAQPAPLLDQLTVSLGVGLRVLGLNVLALLLTLLLPGIGLPIGWAIASWAMGRGLF
                     VAVAMRRLNRSDTEALYRSVRPAALVQGAAMAAAAYFPLLNLLIPVVGTAAMVHVLDL
                     ALTGPRTTQSY"
     gene            4514..5023
                     /locus_tag="VHX39_10340"
     CDS             4514..5023
                     /locus_tag="VHX39_10340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991556.1"
                     /translation="MPRPSKPVPARRLVVDPLPNSVLHKLVADLPGPRNETEAARAAR
                     FEAQLAEVLSYNPRNPAEAMLATHCIMLRLVADDARRDASHARGHPEMARQHQRSAKQ
                     CDQRVAANRRMLADFQSRPLRSLDPATFAALGLTDFLIPDPTQSTDDAEEAFSAIIVP
                     LHPAPNTLQ"
     gene            complement(4983..6020)
                     /locus_tag="VHX39_10345"
     CDS             complement(4983..6020)
                     /locus_tag="VHX39_10345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991557.1"
                     /translation="MSTKAIRLIVISLAVAGLGCGIAAMPQAHARALAIAGYISAIDG
                     RTVDCLVARGGKITPARYWQDLLVGDRLIAKADCRMEIILGDGPRRWTIMASNSPTDM
                     TAHAQRTELLPEALQPIGLLLNQWNDALQPPLPTQTRKAAMKQGNGPPVVIRPSVALP
                     PVVSGELTMALLSGPVQQRLVAQPRRLNLAWLGGKPPFTVTMIGPGQGPADVESWVFQ
                     VGEERVVSSEITPNIGTYNVRVADAAGASVRGMFAAVATGPAIDQHDFSGIPGGISRV
                     LEAARLANVDGGVWRLEAHARLADEGRDNYAAALMAEQLVAGKQLPDLGAVPAAAVST
                     AVYSAPGAAGR"
     gene            6209..6655
                     /locus_tag="VHX39_10350"
     CDS             6209..6655
                     /locus_tag="VHX39_10350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991558.1"
                     /translation="MAAPVTSGTLVAIGAVVAWMLARMVGQHRLTALQRQLESREDNK
                     VLIEERLAAVMRNEDMLTAQVAALQEHFQIVQNQVLHEGRVPALIAATGSTASTISNI
                     ALTAEALNGSLSVLRVGVGGNNNIRLQPPRMNEPRLTHQPDAAVAA"
     gene            6908..>7477
                     /locus_tag="VHX39_10355"
     CDS             6908..>7477
                     /locus_tag="VHX39_10355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3991559.1"
                     /translation="MDIEPDRPAPVAAAPIAQPNIRATEGWPRWLPRLLGYFIAVGPA
                     ATDMYLPAFPAVEATFHTQPGTAQLTLAAWFAGLAIGQIMQGTLSDRFGRRRPLVAGF
                     TVFTLAMVGGALAPSLPALALFRFLGAIGASAGMVVSRAVVRDLAEGTRGAILMSRLV
                     LVMGVAPILAPSIGAAFLAFASWRFIFWFQ"
BASE COUNT         1378 a         2480 c         2259 g         1360 t
ORIGIN      
        1 atcaccggca gcaacgcaag gccgacagcg cagcccagag cgcgattcgc cagattgccg
       61 atgggcaacc gtttcgccgc cggatcgccg ccggaaaccc cttccagcag cggattgatc
      121 gcggtgccga aattcgcgcc cagtaccaac gcgaacgcgg cctcgggcgg aatgacgccc
      181 ttggcggcga acgacatcac cagcaaaacg atcgccacac tggaatgcgc cgcccaggta
      241 atgacggcag cgaggagcag ggcaagcacc ggctgggtgg cgatggcgcc catgaacatc
      301 cgcaagctcg gcacgtcctc gtacggcgtg atcacctcga gcaattgatg caacgacaac
      361 agcatcaggc cgagaccgat cgccacgcgg cccaggtcgc gggtgcgcgt cgcatcgcct
      421 cggttgaaca tcacgaggcc gatcaggaac aggcacggcg ccaggcctgt gatgttgacc
      481 gacagcacct gcacgatcag cgtggtgccg acattggcac cgagcatgac cgccagcgcg
      541 gggatcagtt cgacgaagcc tccagcggcg aagccggtca gcatcaggcc ggttgcggtg
      601 ctgctttgca ggcacgcggt gacgccgacg ccggccatga acgccctgac gcggttgcgc
      661 agagcggccg ccaacaccag gcccagcttg ggcccgaagc tgcgctggat gccggtctgc
      721 accatgtgca cgccccacaa cagcagagcg atcgtgccgg caaggtcgag caatgtgacc
      781 gggaagtcca tgattgcctc ctccggatgc ggagtgcggt aacgggggcg cgcggtttac
      841 ggcatttccg gccggaatgc acgcatcggc ctgctgctgc tgtcattgcg aaccaagtaa
      901 agcgtctccg cgtcctcccg cgttcgggtt accccaacgc gcgcgccacc agcgcctgca
      961 ggtccgcctc cgggcgggcg ccgtaatggc tgatcacctc ggccgccgcc aggctgccca
     1021 tgcggccgca cgccagcagc ggccggcccg cggtccagcc ggccaggaac ccggcggcat
     1081 aggcatcgcc cgcgccggtg gtatcgacga ccttggccgg ttccgcagcg atcgttacgg
     1141 tctccgtgcc ccgcaatata acactgcccg cctccgatct ggtcagagcc gccagcgcca
     1201 cctcggcgcg ggctgcttcg gcggcttcgt caaacgagtt cttttcgtac aggctggtga
     1261 tttccgtctc gttggcgaac aggatatcga catggcccga aacgagatcg cgaaacgccg
     1321 cgcgatggcg atcgacgcaa aacgcatccg atagcgacag cgcaacctgc cggccggccc
     1381 ggtgcgccgc ggcggcggcc gcgcggaacg ctgcctgcgc tgccggcggg tcgaacagat
     1441 agccttccag ataggtcacc gaggcagccg cgacgagttc ttcgtcgaca tcggcttcac
     1501 cgaatgtcac gcaggcaccg agataggtat tcattgtgcg ttgcccatcc ggcgtgacca
     1561 ggatcaggca gcgcgcggtg ggtgcgcctc cggtcagccg cgccgaggga aaatgcaccc
     1621 cgagcgcgct caggtcgtgg gcaaagacgt cgccgagttg atcgtcggcg accttgccga
     1681 gataggcgac acgagagcca agcgttgcgg cgacggcgca ggtattgccg gcggacccgc
     1741 cgctgctttc gatgcccggc ggcatggcgc catacagcgt ctcggcggca gcggcgtcta
     1801 ccaggatcat ggcgcccttg tgcatgtcgt gacgcgacaa gaacgtatcc tccacccgtg
     1861 tggtcacgtc gaccatggcg ttgccgatgc ccaatatgtc gaaacgaatt tctgtcacag
     1921 gcgttgtcct tttgcgttaa cactcaattt gatgaaatca ccgtcaccgg cgccacatcg
     1981 gcggctgcgc tgcccggata tgcagcatca atctgtgcat atctgtgttc aattccttac
     2041 gatcgaacaa aacgcccggg agcgagaagt aagcaagaat ccaaccgcag atacacacgg
     2101 agttacacag atcagcacag acaatgtcga tcgggcgccg acaggatcgg ggtggaacga
     2161 tctcacaacg ggccactcac ggcattatcg tcctttcggc ggacgcgcgc gcaccgctgc
     2221 ctcatcgacc tccacccccc agccgggacc agtgggaagg atcaaatcgc catctacaat
     2281 cttcggcgcg ttgatgaaca gttcatcgcg ccatgccaca ctgtcgatat cgatctccat
     2341 cacccggaag ttcggcacca ccgcacagaa atgtgcactg accgccgagc acaaatgccc
     2401 gtaatagtta tgcggtgcgc agttcacttc gtacgcctcc gccatcgcgg cgatcttgat
     2461 cgactccaga aacccattcc agatcacgtc gatgatcgcg acatccgtcg cataggcatc
     2521 aaagaacggc cggaacgcgc gccgcccggt cactgattcc agtgacgcga tcgggcatgg
     2581 cgcctggcgg cggatcaaag ccagcgactg cggatcccag gtatcgatct ccagccaggt
     2641 catgtcgtac ggcgcgaccg ctttggcgac ctgcaggaag ccctcggtct tgaaatgata
     2701 attgacgtcc aggtgcagcc ccatttccgg tccggcaccc gagcgaaacg ccgccagcgt
     2761 gtcacgcacc gcctgcaagg tcttgcggtc ggcattcaat tccggatgac ccggcgtgcg
     2821 gccaaaccct ggtccaaaac tgaccaaccg gccattctca taaggcagga tattggtttt
     2881 cagcgccttg aaaccgcgct cccgcacctc acggcccaga gcggcaacat cgtcataatt
     2941 ctttaacggc ggcacgccga ccagctcatg gttgcgcacc cggtacgtgc cgcaatgcga
     3001 ccagtacacc gggatccggg tccgcaccgg cccgccgaac aactcgtaaa ccggcacgcc
     3061 aagcgccttg cccttgatat ccagcagcgc attctcgatc gctgcgatgg cccgctggtt
     3121 gaccccattc ggcgcctgca cctggcgcac ataaagcagc gagtcgatcg attgcaccgg
     3181 ccgcggatcg agcccgatca acccctcggc catcccctga atcacggcag acaaaccgcg
     3241 gctgccgtca gcctcggtat attccgacca gccgaccagc ccgtcatcgg tggtgacctt
     3301 caggaacgaa aaagtccgcc agccggcgtc gcaatgcagg ttttcgaatt tggcgagttt
     3361 catcggacgg ctccctggtc tgccatgacc cggttagcac catccggctc tgggcgacag
     3421 ccgtttgcgt gatacacggt catgcatgac accgcttttg ctgccattgt cccgcgcgct
     3481 gacgcaactg accgatccgg cgctgcttgg cgtggtttgg cgcagcgtgc tgttttccgg
     3541 actgtttttc gccgccatcc tgatcggcac aatcggcgcg gtgcaccatt tcgtcactgc
     3601 cggaggtatc gttgcatggg cgctcgatgc tttgggctcg atcgctgccg cggtgttggc
     3661 gatgtggctg ttcctgccgg tcgccgccgt catcggcacg ctgtatttcg agcggatcgc
     3721 gcgtgccgtg gagcgtgtgt attacccatc gctcccgcca gcccaacctg cgccgctact
     3781 ggatcaactg accgtcagtc ttggcgttgg gttgcgagta ttgggcctga acgttctggc
     3841 gttgttgctg acccttctgc tccccggcat tggcctcccc atcggttggg ccatcgcctc
     3901 ctgggctatg gggcgaggcc tgttcgtcgc cgtggcaatg cggcggctaa accgctccga
     3961 caccgaggcg ctgtatcgct cagtccggcc ggccgctctg gtgcaaggcg ctgccatggc
     4021 cgcagcggcg tattttccat tgctgaattt gctgatcccg gtggttggta cggcggcaat
     4081 ggtgcacgtg ctggatcttg cgctgaccgg ccctcgcaca acgcaatcgt attgaatttt
     4141 gccgtccggc gactgcgtat ttgtcagggg actggaccga atggggatac agtcgcgcaa
     4201 ggtcggcagc gtcccgccgt aacgagaatt catttctgca cagtctacca gcccgcgggc
     4261 gggaaactcg acggcatgaa agtcgctttg cggataccga ccattaagaa atttgccgcg
     4321 tatacagaag caaagacgtc tattttcgca acagcaggcc acaattgacg cggtgttgcg
     4381 gacttgccgc cagttcgcat gcggcggctt gcgccgaatc atgcagttgg cgtgccggta
     4441 gaaaggctat tgactaatat cccaacatga gaatatacat tccgtctcgg ccatttagga
     4501 gacatttatt ccaatgccca gaccatccaa gccggttcca gcccgtagac tcgtcgtcga
     4561 ccccttgccg aattccgtcc tgcacaaatt ggtcgccgac ctgcctgggc caaggaacga
     4621 gaccgaggcc gcccgcgctg cccgcttcga agcgcaactg gccgaggtgc tcagctacaa
     4681 cccgcgcaac ccggccgagg ccatgctggc cacccattgc atcatgctgc gtctggtcgc
     4741 cgacgatgcc cgtcgcgatg ccagccacgc ccgtggccac ccagagatgg ccaggcagca
     4801 ccagcgaagc gcaaagcaat gcgatcaacg cgtggcggcc aatcggcgca tgctcgctga
     4861 tttccagtcc cgcccgcttc gctcgctcga cccggcgacc ttcgcggcac tcggcctgac
     4921 cgacttcctt attcctgatc ccacccagag caccgacgac gccgaggagg cgttcagcgc
     4981 catcatcgtc ccgctgcacc cggcgccgaa tacactgcag tagaaaccgc ggcggccggg
     5041 acggcaccca gatccggcag ctgcttcccg gccaccaact gttcggccat gagagcggcg
     5101 gcataattgt cccgcccctc atcggccagc ctcgcatgcg cctccagccg ccacacgccg
     5161 ccgtccacgt tcgccagccg cgcagcctcc agcacacggc tgatacctcc gggaatgccg
     5221 gaaaaatcgt gctgatcgat cgccggcccc gttgccaccg ccgcgaacat cccccgcacc
     5281 gaggcacccg ccgcatcggc cacccgcaca ttgtaagtgc cgatgttcgg tgtgatttcc
     5341 gaggaaacca ctcgctcctc gccgacctgg aacacccatg actcaacgtc ggcaggcccc
     5401 tgacccggac cgatcatcgt gacggtgaac ggcggcttgc cgccgagcca ggcgaggttg
     5461 agccgcctcg gttgcgccac aaggcgttgc tgcaccggtc ccgacaacag cgccatggtc
     5521 aattccccgg acaccacagg cggcagggca accgatggcc ggatcaccac cggcggcccg
     5581 ttgccctgtt tcatcgccgc ttttctggtc tgggttggca gcggtggctg cagcgcgtca
     5641 ttccattggt tcagcaggag gccgatcggt tgcaatgcct ccggcagcaa ctccgtgcgc
     5701 tgcgcatgcg ctgtcatatc ggtgggcgag ttcgatgcca tgatggtcca gcgccgcggc
     5761 ccatcgccca gaatgatctc catccggcaa tcggctttgg cgatcagccg gtcgccgacc
     5821 agcagatctt gccagtaccg ggcgggagtg attttgccac cgcgcgcgac aaggcagtca
     5881 acggttcgcc cgtcgatcgc actgatatag ccggcaattg ccaacgcccg agcgtgcgcc
     5941 tgcggcatcg cggcgatgcc gcatcccagg ccggcgaccg cgagcgatat cacgatcagc
     6001 cgaatcgctt tcgtgctcac caaaggatgt cgcaccctgc cggtcgtcgc ggtcaagctt
     6061 tttgctaatt aaattcgtgg ccggtcttcg ttcggccatg ttatgtttgc cgaatcccca
     6121 gcgcctgata gaaaccagcc tgccaaagca gaggtggctc gtcgaaatgg attcgctgga
     6181 actcctcgaa caaggaatat ctttgataat ggcagcgcct gtcacatcgg gcacgctggt
     6241 cgcaattggc gccgtggtgg cgtggatgct cgccaggatg gttgggcaac acaggcttac
     6301 tgcgttgcag cgccaactcg agtcgcgtga ggataacaag gtactgatcg aggaacgatt
     6361 ggccgcggtc atgcgaaatg aagatatgct gacggcccag gtagctgcgc tgcaggagca
     6421 tttccagatt gtgcagaatc aggttctgca tgagggccgc gtgccggcgt tgattgcggc
     6481 gaccggttcg acggcaagca ccatctcgaa tatcgccttg acggccgagg cgctgaacgg
     6541 gtccctgagc gtgctgcggg tcggcgtcgg cggcaacaac aacattcggc ttcagccgcc
     6601 gcgcatgaac gaacctcggc tgacccacca gccggatgcc gcagtcgctg cgtaggctgt
     6661 tgtcgcctca acacagtgat gatgaggggt tgaacctgcc caggtttcaa cgcgggtaag
     6721 gcgacacgac cgaccggcgc ggtgacggcc atcgacactg tgctgatgcg gaatgagata
     6781 gcgccaagat agtttggcgc acccggccgc tcgactctcg gccgacgctc gcccgagatg
     6841 gcagcttgcg tgcgacggaa tatctctcgc gccttttgct gcactgcgat atgaacggcc
     6901 gagcaccatg gatatcgaac cagacaggcc cgctccggtc gccgccgcgc caatcgcaca
     6961 accgaacatc cgcgcaaccg agggctggcc gcgttggcta cctcgattgc ttggctattt
     7021 cattgcggtc gggccggccg cgaccgacat gtatttgccg gcctttccgg ccgtcgaggc
     7081 gacgtttcat acccagcccg gcactgcgca gttaacgctg gcggcgtggt ttgccgggct
     7141 cgcgattggc cagatcatgc aggggacgct atccgaccgt ttcggtcgcc ggcggccctt
     7201 ggtagccggc ttcaccgtct tcacgctggc catggttggg ggcgcgttag ctccgagcct
     7261 cccggccttg gcgctgttcc ggtttcttgg cgcgatcggc gcctcggccg gcatggtggt
     7321 cagccgcgct gtggtgcgcg acctcgccga gggcacgcgc ggtgcgatcc tgatgtcacg
     7381 gctggtgctg gtgatgggcg tggcgccaat cctggccccg agtatcggcg ccgctttcct
     7441 ggccttcgcc agttggcggt tcatcttctg gtttcag
//
LOCUS       DATAVD010000560         5229 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2659200, whole genome shotgun sequence.
ACCESSION   DATAVD010000560 DATAVD010000000
VERSION     DATAVD010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5229
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2659200"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(124..1413)
                     /gene="oxlT"
                     /locus_tag="VHX39_10360"
     CDS             complement(124..1413)
                     /gene="oxlT"
                     /locus_tag="VHX39_10360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxalate/formate MFS antiporter"
                     /protein_id="HEX3991560.1"
                     /translation="MSENSSAPSNLTGRWVQLWLGVLCMALIANLQYGWTLFVGPIHT
                     AHGWTLAEIQWAFSIFIATETWLTPAAGAIVDRLGPRTGPGLTIGVGGLLVGIGWVIN
                     AYADSLTLLYIGAAVSGTGAGAIYATCVGNAVKWFPDHRGLAVGLTAGGFGAGAALTV
                     IPIRLTISTAGYAHAFLWFGIGQAVVLLLVSRTLRAPDRPIVLQNKTSPGIQQSIRSS
                     TSGEMLRSPIFWLLYVMFIGISASGLMVTAQIAPIAKDYGISNSVIFLGVSTLSLALV
                     VDNVLNGAARPFFGWLSDRIGREKTMALAFTLGALSYWLLAVAGRSPWAFVVCAGLIF
                     FTWGEIFSLFPSTCTDTFGPKYATANTALLYTAKGTSAFLVPLANVLKTATGSWEAVF
                     LVAAATNVVVVLLALFVLRPLRTSQLRRARLAEMSSG"
     gene            1631..2143
                     /locus_tag="VHX39_10365"
     CDS             1631..2143
                     /locus_tag="VHX39_10365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991561.1"
                     /translation="MRRFVSAVAALTILSSQSVLAQPQCSSMADQSAFEVQALRSELM
                     VLATGCHDDASYNAFIRRYQSSLQGNERAIDAYFKHRYGRMGQTEHDRFVTDLANAIS
                     RQGSDLGGDFCPRNGLIFNEVLALESASELPDFAAGKDLIPASVSVCAPMPPSAVAVR
                     KASFVRKKKK"
     gene            complement(2305..3072)
                     /locus_tag="VHX39_10370"
     CDS             complement(2305..3072)
                     /locus_tag="VHX39_10370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010507648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEX3991562.1"
                     /translation="MAYSPQFGAYPRASAATTAVFDAGLRAYMLRVYNWMASGLLLTG
                     VVAFAIAHTSLLNAFYPLVQTPFGFAHRPSVLAMIAMFAPLGFVLVLSLGVNKLSTQA
                     AQALFWVFCAAMGASLVNIFLVYTSESIVRVFFITSATFAATSLYGYTTKADLSRIGG
                     FLMMGLFGIIIASVVNLFFHSTAMQFAISIIGVVVFTGLTAYDTQRIKGSYLQFAYAE
                     GTDGANKRSVYDALSLYLNFINLFMMLLQLLGNRNNN"
     gene            complement(3206..>5229)
                     /locus_tag="VHX39_10375"
     CDS             complement(3206..>5229)
                     /locus_tag="VHX39_10375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX3991563.1"
                     /translation="ATFRVAGVLTYEPDRVGTAAILGPRVLISVDALPSTGLISPGAM
                     VRYAVRLTTRDPAGIMRAIGKQYPNQGWRIRDPSDAAPGVSRFIDQTALFLTLVGLTS
                     LLVGGIGVANGVRAWLDARARTIATLRCLGASGRLVFAVCLIQVLVLSAGGIVLGVIV
                     GATLPLAGAHFLTPILPVPPVFGLYPGPLLLAAAYGLLIALCFALWPLGRAARIPGGA
                     LFRDGLVPQAARPSAVLIATNAALALALVGLTVATATDRFFALYFCVGAGLTLALFRA
                     GGSAVMALARLAPVSRFPSIRLGVANLYRPGAPTPLLLLSAGLGLSTLAAVALIQGNM
                     QYQIQAQLPANAPSFFFIDIQNDELPRFEAIVRAQPGVTEMHQVPSLRARIVAVKGIP
                     AEKAVTTPETAWALKGDRGLTYAATPPEGTHLVAGKWWPADYDGPPLVSIDANMAKGW
                     HVGIGDIIRVNVLGRDIDLKIENLRNIAWRSLSINFFMVASPGLLAHAPHTHIATVRI
                     ADAEQGGLLRAVTDALPNVTGIRVEDVLSAVSALLDQIAAALTVTGALTLLAGTFVLV
                     GAVAAGQRRRVREAVILRTLGATRAQIRAAWLTEFGLLGCVAGVIAAAVGSAASYGVA
                     HYIMHTDWIFLPVTLIYTLAGALALMLLFGYAGTAAALRARPAPLLRNE"
BASE COUNT         1076 a         1640 c         1698 g          815 t
ORIGIN      
        1 tcggccgggg gccgtcagcc atccggcgtg tcacccgccg aagcccgcat ccatccggtc
       61 ggcacggcac gtcgttcccg cccggaacgc gcggggggat tcgcacatcg acggaagcgg
      121 gtatcagccg ctcgacatct cggccagacg tgccctccga agctggctcg tccgcagtgg
      181 ccgcaacacg aacagggcca gcaggacgac cacgacgttg gtggccgcgg cgaccaggaa
      241 taccgcttcc caactgccgg tcgccgtctt cagcacattc gccagcggca ccaggaacgc
      301 cgacgtgccc ttggcggtgt acagcagagc ggtgttcgcg gtagcgtatt tgggtccgaa
      361 cgtatccgtg caggtggagg gaaacaggga gaaaatttca ccccaggtga aaaagatcag
      421 gccggcacac actacgaaag cccacgggct ccgtccggcc actgccagca gccaatagct
      481 gagcgcaccc agggtgaagg ccagcgccat cgtcttttct cgcccgatgc ggtcggacag
      541 ccagccaaaa aacggcctgg cggctccgtt cagcacgtta tcgacgacca gcgcgagact
      601 cagggtgctg acaccaagga aaatcaccga gttggagatg ccgtagtcct tggcgatagg
      661 cgcgatctgc gcggtgacca tcaggccgct ggccgagatg ccgatgaaca tcacatacag
      721 cagccagaag atgggggaac gcagcatctc cccactggtg gagctgcgga tactctgctg
      781 aatgcccggg ctggtcttgt tctgcaggac gatcggccgg tcaggcgccc gcagggtgcg
      841 ggaaacgagc aacagcacca ccgcctgacc gatgccgaac cacaggaacg cgtgggcgta
      901 gcccgcagtg ctgatggtca ggcggatggg gatcacggtc agcgccgcgc cggcaccgaa
      961 tcctccggcg gtcaggccga cggcgaggcc gcgatggtcg gggaaccact tcaccgcgtt
     1021 gccgacgcag gtggcgtaaa tcgcacctgc cccggttccc gacacagccg caccgatata
     1081 gagcagcgtc aatgaatcgg cgtaggcgtt gatcacccag ccgataccga ccagcaaacc
     1141 gcccacaccg atggtcaggc cgggtccggt gcggggccca aggcgatcga cgatggcgcc
     1201 ggcggcaggg gtcagccagg tttcagtggc gatgaagatg ctgaaggccc actggatttc
     1261 cgccagtgtc cagccgtggg ccgtgtggat cggaccgacg aacagcgtcc agccatattg
     1321 cagattggcg atcagtgcca tgcaaaggac acccagccac aactggaccc aacggccggt
     1381 cagattcgac ggcgcggatg aattctcgga cactttagcc ctcccaggat gccgtttcgg
     1441 cattcgttag cttactgcag gtcgcaatac cgcccgtctg aacggccgga ttgcgcatta
     1501 tagctgtttt catcgcattg gtaaggcggg gccggaataa tcgttgctac ttcacgaaag
     1561 caatttgctg gtggcggcgc gttccggcgc gcgctatgca accggcgcaa tcgccataaa
     1621 ggagaaacat atgcgccgat tcgtgagcgc tgttgccgcc ctgaccatcc tgtcctccca
     1681 atcggtactg gcgcaacccc aatgctcgtc gatggcggat caatcggcgt ttgaggtcca
     1741 ggctctgcgc agtgaactca tggtgctggc gacaggctgc catgatgatg catcctacaa
     1801 tgccttcatc cggcgctatc agagcagcct gcaaggcaac gaacgggcga tcgacgccta
     1861 tttcaagcat cgctacggcc gcatgggaca gacggagcac gaccggttcg taaccgatct
     1921 ggcgaatgcg atttctcggc aaggcagcga tctgggcggc gatttttgtc cgcgcaacgg
     1981 gctgatcttc aacgaggtgc tggcactgga atcggcgtcg gaactgccgg atttcgccgc
     2041 gggcaaggac ctgatcccgg cttccgtatc ggtctgcgcg ccgatgccgc cgagcgcggt
     2101 ggctgtgcgt aaggcgtcat ttgtcaggaa aaagaagaag taagtcgagg ggcctgtccc
     2161 ttaggtcggc tctttgcggc ccaagcccgc caagagccga cggcccttgg gaccatacgc
     2221 ttggggcctc ggcataaaga aagggctacc gggacattga cgccccggta gccctttttc
     2281 acgaatggat gggcagtgcc cggtttagtt gttgttccgg ttgcccagaa gctgcagcag
     2341 catcatgaac aggttgatga agttcagata caggctgagc gcgtcgtaga cgctgcgctt
     2401 gttcgctccg tcagtgcctt cggcataggc gaactgcagg tagctgccct tgatgcgctg
     2461 ggtgtcatag gcggtcaggc cggtgaacac gaccacgcca atgatgctga tggcgaactg
     2521 catcgcagtg ctgtggaaga acaggttgac cacactggcg atgatgatcc cgaacagccc
     2581 catcatcagg aagccgccaa tgcggctgag gtctgccttg gtcgtgtagc cataaaggct
     2641 ggtcgcagcg aatgtggccg aggtgatgaa gaacacccgc acgatggact cgctggtgta
     2701 gaccaggaag atgttcacca ggctggcgcc catcgccgcg cagaacaccc agaacaaggc
     2761 ctgcgccgct tgagtggaca gcttgttgac gcccagcgac agcaccagga cgaaacccag
     2821 cggcgcgaac atcgcgatca tcgccagcac cgacggtcga tgcgcgaacc cgaacggggt
     2881 ctgaaccaga gggtagaacg cgttcagcag gctggtatgg gcaatcgcga aggcgaccac
     2941 accggtcaag agcagaccgg atgccatcca gttgtaaaca cgcagcatgt aagcccgtag
     3001 cccggcgtcg aagacagccg tggtagcggc ggatgcccgg ggataggccc cgaattgcgg
     3061 actgtaagcc atggttttca gtttcctttc gagcgtgagc ccgcgttgat tatagccgat
     3121 cggccccctt ggtaacagtc tccaaggata agacccaccg gggtcgattg gcatgtggtc
     3181 agtcagacgg aaccgaactg atgcgctact cgttcctcag gagtggcgcg ggtctggccc
     3241 gcagagcggc tgcggtacca gcatacccga acagcagcat gagtgcgagt gctcccgcaa
     3301 gtgtgtaaat gagtgttaca ggcagaaaaa tccagtccgt gtgcataatg taatgcgcca
     3361 ccccgtagct ggcggccgac cccacggcgg cggcgatcac gccggccacg catcccaaca
     3421 agccgaactc ggtcagccat gccgcacgga tctgggcacg tgtcgccccg agggtgcgga
     3481 ggatcaccgc ctcccgcacc cgccgccgct ggccggccgc gaccgccccg accaggacga
     3541 acgtgccggc gagaagggtc agtgcgcccg tgacggtcag cgcggcggcg atctggtcca
     3601 gcaaggcgga cacggcggag agcacgtctt ccacgcggat gccggtgacg ttcggcaatg
     3661 cgtcggtgac ggcacgcaac agaccgccct gctccgcgtc cgcgatgcgg accgttgcga
     3721 tatgggtgtg cggcgcgtgg gccagaagac cggggcttgc gaccatgaag aaattgatgg
     3781 acagcgaccg ccaggcgata ttccgaagat tctcgatctt caggtcgata tcgcggccca
     3841 gaacgttgac acggatgatg tcgccgatac cgacatgcca gcctttggcc atgttggcat
     3901 cgatggaaac cagcggcggc ccgtcataat ccgccggcca ccacttaccc gcgaccagat
     3961 gggtcccctc cggcggcgtc gcggcgtagg tcaggccccg gtcacctttc agcgcccagg
     4021 cggtttctgg ggtggtgacc gccttctccg ccggaatgcc cttgaccgcg acgatccggg
     4081 ctcgaagcga cggaacctga tgcatctccg ttaccccggg ttgcgcgcga acgatggctt
     4141 caaaccgcgg caactcgtca ttctgaatgt cgataaaaaa gaagctgggg gcgttcgcgg
     4201 ggagctgcgc ctgaatttgg tattgcatgt tgccctggat cagcgccacg gccgccagcg
     4261 tcgacagccc cagaccggcc gacagcaaca acagcggcgt gggggcgcca gggcggtata
     4321 agttggccac gcccagccga atcgatggga accgcgatac cggtgccaac cgagcgagcg
     4381 ccatcactgc cgatccaccg gctcggaaca gcgcgagggt cagaccggca cccacgcaaa
     4441 agtacagtgc gaagaagcgg tcggtggcgg tggcgacggt caggccgacc agggcgagcg
     4501 ccagcgccgc attcgtggcg atcagcacgg ccgagggccg cgccgcctgc ggcaccaggc
     4561 catcccgaaa caaggcgccg cccgggatgc gtgccgcccg gcccagcggc cacagcgcga
     4621 agcacagggc gatcagcaga ccataggcgg cggccagcag cagcggtccc gggtagaggc
     4681 cgaataccgg cgggaccggc agaatcgggg tcaggaaatg ggcgccggcc agcggcaagg
     4741 tggcacccac tatcacgccg aggacgatcc cgccggcgga cagcaccagc acctggatca
     4801 ggcacacggc gaacaccagg cgacccgacg caccaaggca acgcaacgtc gcgatcgtac
     4861 gcgctcgggc atccagccag gcccggactc cgttggcgac accgatgccg ccgaccaaca
     4921 gcgacgttaa tccgacaagg gtcaggaaca gcgccgtctg atcgatgaaa cggctgacgc
     4981 ccggcgcggc gtcggacgga tcgcggatgc gccatccctg gttaggatat tgtttgccga
     5041 tagcccgcat gataccggcc ggatcgcggg tggtcaggcg gaccgcatag cggaccatgg
     5101 cacccggcga gatcaggccc gtcgacggca gcgcatcgac tgaaatcagc acccgaggac
     5161 ccaggatggc agcggtgccg acccggtccg gctcgtatgt cagcacaccg gcgacccgga
     5221 acgtcgcgg
//
LOCUS       DATAVD010000561         4972 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2285491, whole genome shotgun sequence.
ACCESSION   DATAVD010000561 DATAVD010000000
VERSION     DATAVD010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4972
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2285491"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VHX39_10380"
     CDS             <1..298
                     /locus_tag="VHX39_10380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008853827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3991564.1"
                     /translation="RIGPYEFSPEDKALRHGEGNLRIRLTEKEAAILAFLHRMGERAV
                     PRQELLTEVWGYHPQVTTHTLETHIYRLRRKIEADPAKACLLITEAGGYRLAAG"
     gene            complement(409..1512)
                     /locus_tag="VHX39_10385"
     CDS             complement(409..1512)
                     /locus_tag="VHX39_10385"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX3991565.1"
                     /translation="MIAESAAPLRAQALVRQPRIFPLVQGLRAVAAAAVAFGHVAHDA
                     VTAGRDPNGLIAGAEGWLSWGAGVDIFFVISGFVIVHASANLFGRQGATTRFLRRRLT
                     RIVPLYWALTTLFLAMELLNASAVHGETGGAGYIVASYVFFPFPRPDGLVQPALGLGW
                     TLNYEMFFYCLLSPFLRYRREAAVAGCALSLCLLVAVEHFGNFGATALQFWANPIVLE
                     FVLGMGIAVAVARGLSLPGWVRFVLAALAVVYMHAQGDLPFTARVLTFGVPGAMLVVA
                     AVSCARAESDSRTMRCLVRLGDASYAMYLFHPFVMRTATLLGERLGAHSEGSGITIVV
                     LSLVAAQICALLINMIFERRVTAMLRGNQRALA"
     gene            complement(1588..2727)
                     /gene="ald"
                     /locus_tag="VHX39_10390"
     CDS             complement(1588..2727)
                     /gene="ald"
                     /locus_tag="VHX39_10390"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000286 - alanine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HEX3991566.1"
                     /translation="MKIGVPKEIKIQEYRVGLTPGAVRELSQHGHQVMVEHNAGTGIG
                     YGDDAYRASGAVIAETAEPIFEAAELIVKVKEPQPTEIARLRRGQILFTYLHLAADRA
                     QTEGLIRSGATCIAYETVTDRSGALPLLAPMSEVAGRMAIQVGAHCLEREQGGIGILL
                     GGVPGVPPAKVVVLGGGVSGSNAARMASGLEASVTIIDRSIPRLKELDLQFGARATTL
                     FATTEAIERSVLSADLVIGAVLVPGAAAPKLVTREMVRQMRPGSVLVDIAIDQGGCFE
                     TSRPTSHSEPTYVEENVVHYCVTNMPGAVPRTSTYALTNATLPFVMALAAKGWRRAML
                     DDPYLREGLNVHDRQVTHPAVAQAFGMPYVGAAKVVAEAATGEGR"
     gene            complement(2825..3880)
                     /locus_tag="VHX39_10395"
     CDS             complement(2825..3880)
                     /locus_tag="VHX39_10395"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MraY family glycosyltransferase"
                     /protein_id="HEX3991567.1"
                     /translation="MTSFAILRHLAFGVLLAVLSAIVVRAMITVRVIDAPAERKVHDR
                     PTPKGGGAGIVVAFLVGLVLLYGFAQFARLANEYFLGVIAASFSIAVVAFLDDLFDWP
                     FVVKLGIQAVAALVAVGTGIYLHDYSIPYLGPVYVGWIGPPITLAWLLFTTNAVNFID
                     GLNGLASGVILIASLFLAYFSASYGAWFCYAASGMLAAGLAGFLPFNFPRARIFMGDV
                     GSQFCGFMIAVLGMVASRFDGAELSFLLVPMLLSGVLFDVGFTLVRRSLAGERVTQPH
                     RGHLYQVAQRAGVPAVTVTLIHWGFAIFGGLCCLAFLQVSGGWKLVMLCATIPPQLAW
                     LGFVVRAAARNGIAQWG"
     gene            4261..>4972
                     /locus_tag="VHX39_10400"
     CDS             4261..>4972
                     /locus_tag="VHX39_10400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEX3991568.1"
                     /translation="MQAARSLIRIAVNVAIDGALAAIAVPLAWWITDPTGTVPSAAIV
                     IPLGSAALLLAGTPFRLSQQYWRFAAIGDLLSVTGSAALGAVLFFVLLYATGLGHPST
                     GFPLAHGLVLLAVLGAPRVGYRWFRSRGLGPVAEPNATSVLVVGQTEDCDLFLRALGR
                     DRRQRFRVEGVLTPGDRQTGRRIQGYSILGAMKDAGSVLERLRDDGRLPGTLVMATPD
                     LQGGPLASVVAQADRFGLR"
BASE COUNT          995 a         1597 c         1535 g          845 t
ORIGIN      
        1 caggatcgga ccctatgagt tcagcccaga ggataaggcg ctgcggcatg gtgagggcaa
       61 cctgcgcatt cggctgaccg agaaggaggc tgcaatcctg gcgttcctgc accgcatggg
      121 tgagcgtgcc gtgccgcggc aggaattgct gaccgaggtc tggggttacc atccacaagt
      181 tacaacgcac acgctggaga cccacatcta tcgtctgcgg cgaaaaattg aggcggatcc
      241 ggcgaaagcg tgtctgctga tcaccgaggc gggcgggtat cgtctcgcgg cagggtgaat
      301 ttgccgcccc gccttacagg tcgcacgacc cggctctaac ggacgggcga acaccaggat
      361 ctatgttctg gggttgcact ccgacgtgac tgctccgcaa tgccaatgct acgccagcgc
      421 acgttggttg ccccgcagca tcgcggttac cctgcgctcg aatatcatgt tgatcagcag
      481 cgcgcagatc tgggccgcca ccaggctcag caccacgatg gtgatcccgc ttccttcgct
      541 gtgcgcaccg aggcgctcgc ctaatagtgt cgcggtccgc atgacgaacg gatggaaaag
      601 gtacatcgcg taggacgcgt cacccagccg aaccagacag cgcatcgttc ggctgtcaga
      661 ctcagcgcgc gcacacgaga ctgccgcgac gaccagcatc gcccccggaa cgccgaacgt
      721 cagcacccgc gcggtgaacg gcaagtcgcc ctgcgcatgc atgtaaacca cggccaaggc
      781 tgccagtaca aaccgaaccc agcccggcag gctcaggccc ctcgcgaccg ccaccgcgat
      841 acccatgcca agaacgaact cgagtacgat cggattggcc cagaattgca acgccgttgc
      901 gccgaagttt ccgaagtgct ccaccgcgac caggaggcat aacgagagtg cacaaccggc
      961 aactgcggcc tcgcggcgat accgcaggaa cggcgacaac aggcagtaga agaacatttc
     1021 gtagttcagg gtccagccaa gacccagagc cggctgcacc agaccgtcgg gacgcggaaa
     1081 aggaaagaat acgtagctgg ccacaatata gccggcgccc ccggtctcgc cgtgcactgc
     1141 cgaggcgttc agcagttcca tggccaggaa cagcgtcgtc aaagcccagt acagcggcac
     1201 gatgcgggtc aggcgtcgcc gcaggaagcg agtggtcgcc ccttgccgtc cgaacaggtt
     1261 ggccgaagcg tgcacgatga caaagccgga gatgacaaag aagatatcga cgccggcccc
     1321 ccacgacagc catccttcgg cccccgcaat caggccattc gggtctcggc ccgctgtgac
     1381 cgcatcatgc gccacatgac cgaacgcaac cgctgccgcc gcgacagcac gcaacccctg
     1441 gaccagcggg aaaattcggg gctgccgcac taaggcctgg gcacgcagag gtgctgcgga
     1501 ttcggcgatc atgatgttgg ttgcggtaac agttctgtcc aaatgcgtcc acgacaccgc
     1561 ttggcttact gtcggctgga aagcacccta tcggccttcg ccagtagcag cctctgccac
     1621 cacctttgct gccccaacat aaggcattcc gaaagcctgg gcgaccgccg gatgagttac
     1681 ctggcgatcg tgaacgttca gcccttcgcg caaatacgga tcgtccagca tcgctcgccg
     1741 ccagcctttc gcggccagtg ccatcacgaa cggcagcgtt gcgttggtca gcgcataggt
     1801 cgaggtcctc ggcaccgcgc cgggcatgtt ggtcacgcaa tagtgcacga cgttttcttc
     1861 cacgtaggtt ggttcggaat gcgaggtcgg acggctggtc tcgaaacaac cgccctgatc
     1921 gatcgcgata tcgaccagca ccgaaccggg ccgcatttgc cgcaccatct ccctggtgac
     1981 cagcttcgga gcggccgcgc ccggcaccag cacagccccg attacgaggt cggcggacag
     2041 caccgaccgt tcgattgcct cggtggtggc gaacagggtg gttgcgcgcg caccgaattg
     2101 cagatcgagt tctttcagcc ggggaatcga gcggtcgatg atggttaccg acgcctccag
     2161 cccagaagcc atgcgcgctg cgttgctgcc ggagacacca ccacccagaa cgacaacctt
     2221 cgcaggcggc acgccgggaa caccaccgag cagaatgccg atgccgcctt gctcccgttc
     2281 caggcagtgg gcgccgacct ggatcgccat gcggccggcg acctcgctca tgggcgcgag
     2341 caaaggcagt gcgccggacc ggtccgtcac cgtttcataa gcgatgcagg tggctccgga
     2401 acggatcagt ccctcggtct gggctcggtc ggcagcgagg tggagatagg tgaacaagat
     2461 ctggccacgc cggagccgcg cgatctcggt tggctggggt tccttcacct ttacgatcag
     2521 ttcggcggct tcgaaaatgg gttcggcggt ttctgcgatc accgcgccgg atgctcgata
     2581 ggcatcgtca ccgtagccga tgccggtacc ggcgttgtgc tcgaccatga cctgatggcc
     2641 gtgctggctg agttcccgca ccgcccccgg agtcagtccg acccggtatt cctggatttt
     2701 gatttccttg ggcacaccga ttttcataac gaactccgcg ttgcgtcccg aatatgggcg
     2761 aggcagggtg gaaatcatcc cctggggcgg gaggctggcg agccgctggt caacggcgtc
     2821 cgtctcaccc ccattgtgca attccattcc gcgccgccgc ccggaccacg aagcctagcc
     2881 aggccaattg cggcggaatg gttgcgcaca gcataaccag cttccaacca ccagaaacct
     2941 gcagaaaagc gaggcaacac agtccaccga aaattgcgaa gccccaatgg atcagggtga
     3001 ccgtcacggc cggcacgccg gcgcgctgag caacctgata cagatgacct ctatgcggct
     3061 gggtcactcg ttcaccggcc agactgcggc gcaccagggt gaacccgacg tcgaacaaca
     3121 ccccgctcag cagcattggg accagcagaa atgacagttc ggccccgtcg aaccggctcg
     3181 cgaccatacc gagcaccgca atcatgaaac cgcaaaattg gctgccgaca tcgcccatga
     3241 aaatccgcgc gcgaggaaag ttgaacggca aaaagcccgc caggccggcc gccagcattc
     3301 cactggcagc ataacagaac caggcgccgt agctggccga aaaatacgcc agaaacaggc
     3361 tggcgatcag aatgactcca ctcgccagtc cgttcagccc atcgatgaaa ttgacggcat
     3421 tggtggtgaa cagcagccag gccaaggtga tcggcggtcc gatccagccg acatagaccg
     3481 gcccgaggta ggggatggaa tagtcatgca agtaaattcc ggtgcctacc gcgaccaggg
     3541 ccgcaacggc ctggatccca agcttgacca cgaacggcca gtcgaacagg tcgtccagga
     3601 atgccacgac ggcgatcgaa aacgacgccg cgatcacgcc cagaaaatac tcgttcgcca
     3661 gtcgcgcgaa ttgcgcgaat ccgtaaagca gcaccagtcc cacgaggaag gcaacgacaa
     3721 tgccggcgcc ccctcctttc ggggttggcc ggtcatgcac cttgcgctct gccggcgcgt
     3781 ctatcacccg caccgtgatc atggcgcgga cgacaatcgc cgacagcacg gcgagcaata
     3841 cgccgaacgc cagatgacgc aggattgcga acgacgtcat tcgtcgcggc gaacgtcgga
     3901 ttgtcggcag aggatgcggt caccggccgt cggcacaagc tccgccagtg cagggtcagt
     3961 catttgtttc cgggactgac gacctggccg cgcctggcac tgaatgggaa ctcctgctgc
     4021 ggccccgact cacaaggatc gttcattcga tccgccgctg tctgacctgc ccggccagta
     4081 acgggtgcct cgcgaacgcg tcaataaccc tcagatccgg cgcaaccacc atcatcaaat
     4141 ggtctcgatc ttgggccatc gaggccgtat gccgccgttg ttggccggct tagagcacac
     4201 gcatggaggc tttcccattg gcgggtatga cggcatcggt cgccgcgcta tagagcggcc
     4261 atgcaagcgg cgcgctccct gattcgcatc gccgtcaatg tcgcaattga cggggccttg
     4321 gcggcgattg cggttccgct ggcctggtgg atcaccgacc ccaccggaac ggtaccctcg
     4381 gctgccatcg tcattccgct tggctcggcc gcactgctcc tcgccggcac gccgtttcgg
     4441 ctttcgcagc agtattggcg tttcgcggcg atcggcgatt tgctgtccgt caccgggagt
     4501 gccgcgctcg gcgcggtgct gttttttgtg ctgctttatg cgacgggact gggacatccc
     4561 agcacagggt tcccattggc acatggcctc gtgctgctgg cggtgcttgg tgcgcccagg
     4621 gttgggtatc gttggttccg gtcgcgcgga ttggggccgg tggcagagcc gaatgcgaca
     4681 tcggtgctgg ttgtcggtca gaccgaagat tgcgacctgt ttctgcgcgc tctgggacgg
     4741 gacaggcggc agcgctttcg ggttgagggt gtgctcacgc ctggcgaccg ccagaccggg
     4801 cgacgaattc agggctactc aattctcggt gccatgaaag atgccggctc ggtgctggaa
     4861 cggctgcgtg atgatggcag gctgccaggc actctggtga tggcaacgcc ggatttgcag
     4921 ggaggtccgc tggccagcgt ggtggcgcag gctgatcgct tcggcctgcg gg
//
LOCUS       DATAVD010000562         4554 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1355353, whole genome shotgun sequence.
ACCESSION   DATAVD010000562 DATAVD010000000
VERSION     DATAVD010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4554
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1355353"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..205
                     /locus_tag="VHX39_10405"
     CDS             <1..205
                     /locus_tag="VHX39_10405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991569.1"
                     /translation="NYRVALAEEGCFDRSQASHAISLCDMHAKYADVVKTADVLTFFN
                     SLPEGLFELPSGTTPAQSRLAAE"
     gene            341..940
                     /locus_tag="VHX39_10410"
     CDS             341..940
                     /locus_tag="VHX39_10410"
                     /inference="COORDINATES: protein motif:HMM:NF020905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urea carboxylase-associated family protein"
                     /protein_id="HEX3991570.1"
                     /translation="MSDPITIPARRGKAAFVRQGQTIKVINTHGHQVVDTWAFGRNDL
                     GEFMSMEHSRATHHHIVPRVGDALLTNHRHPILTLLEDTAGGIHDTLMAACDRYRYAE
                     LGCTECHDNCTDNLAAALAELGLAAPETPSPLNLFMNIPWTTMGELSFEPPVSTPGSF
                     VVLRAEIDLIAAFSACPQDILPINGRACQPVEAHFIISD"
     gene            999..1391
                     /locus_tag="VHX39_10415"
     CDS             999..1391
                     /locus_tag="VHX39_10415"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX3991571.1"
                     /translation="MLPVFHLIGGAPTPVAPYSHAVEQDGWLFITGQLATDPDDDARP
                     IPDGIEAQTHKVMDNLRRVLNGLGVGLEHVLCVRVFLTEFKRDYAAFNAIYQSYFPPG
                     RLPARTTVGVTALARDGIIEIDMIARRP"
     gene            1644..2702
                     /locus_tag="VHX39_10420"
     CDS             1644..2702
                     /locus_tag="VHX39_10420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007284147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEX3991572.1"
                     /translation="MPKFQPAERTGAQSLHHLPARADTVHWGYFDAALAPAIRVRSGD
                     LIRAEAITHHAGDAPHLMMDAEIHALYAAIPETDRAPGVHIMTGPIYVEDASPGDMLE
                     VRYLEMVPRFAFGSNLAAHWGHLYREMAERERVTIYRIDRATNLAAAEFAYDVKEKYT
                     IPGRITDCAACDCQPALRGVRVPVRPHLGTAGVAPDVPGRVSSVPPGLHGGNIDNWRI
                     GAGATMYYPVQVPGALFSVGDPHISQGDGEISGTAIEASLDVLFQVHVRKDFHFPSPL
                     LETPRFWIVHGFDEDLNVAMRNASLDMIRLLTEQQQLSHDDAYSLMSVAADFAVTQVV
                     DGNQGIHCRIARSVFGRD"
     gene            3004..>4554
                     /gene="ettA"
                     /locus_tag="VHX39_10425"
     CDS             3004..>4554
                     /gene="ettA"
                     /locus_tag="VHX39_10425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006116781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEX3991573.1"
                     /translation="MASYQYVYVMKDLTKNFPGGREVFKGITLSFLPGVKIGVLGVNG
                     AGKSTLMKIMAGLETEFGGEAWAAPGATVGYLAQEPRLDPDKTVGQNVEEAFTDLKAA
                     LDRFNEISTKFAEPMTDDEMNNLLVEQGDLQEKIDSQDGWELDRRVDIALDALRCPPA
                     DAKVTTLSGGERRRVALCKLLLEKPDLLLLDEPTNHLDAESVAWLEKTLHDYAGTVMV
                     VTHDRYFLDNVTNWILEIERGRGFPFEGNYSTWLEQKLKRLRQEEKEESARQRALSAE
                     QEWIQSSPRARQTKNRARIQRYEELQQKSLEQAGGVADIVIPPGPRLGNVVIEAEAVR
                     KGYGNNLLIDDLNFKLPPGGIVGVIGPNGAGKTTLFRMITGQETPDTGTLRVGETVKL
                     GYVDQSRDSLNPDRTVWQEISGGDEVIYLGKRAIQSRAYVAAFNFKGSDQQKKVGILS
                     GGERNRVHLAKMLKQEHNVILLDEPTNDLDVDTLRALEEALTEFAGCVVIISHDRWFL
                     DRLATHMLA"
BASE COUNT          913 a         1389 c         1398 g          854 t
ORIGIN      
        1 gaactaccgc gtggcactcg ccgaggaagg ctgtttcgat cgcagtcagg cgagccacgc
       61 catcagcctg tgcgatatgc atgcgaaata cgccgacgtg gtgaagaccg ccgacgtcct
      121 gaccttcttc aattcgctgc ccgagggttt gttcgaactg ccgtccggca cgacgccagc
      181 ccagtcgcgt ttggcggcgg agtagggtcg cactgtggca ggaagcggta cgacaggcag
      241 cgtttcgtcc cagttgaaaa cgcgataaac ggcagccacg ccggtggcga ccggaccaaa
      301 tggatttacc gccacgtcaa cggaagcagc ggagaccggc atgtcggacc cgatcaccat
      361 tccagcccgc cgcggcaaag ccgccttcgt ccgccagggc cagaccatca aagtcatcaa
      421 cacccacggt catcaggtcg tcgatacctg ggcttttggg cgtaacgatc ttggtgaatt
      481 catgtcgatg gagcacagtc gtgccaccca ccatcacatc gttccccgag ttggcgatgc
      541 gttgctgacc aatcaccgcc acccgattct gacgttgctg gaagataccg ccggcggcat
      601 ccacgacact ctgatggccg cgtgcgatcg ttatcgctat gccgaactcg gctgcacgga
      661 atgtcacgac aattgcacgg acaaccttgc cgctgccctg gccgaactgg gtcttgccgc
      721 acccgaaacg ccgagtccgc tgaatttatt catgaacatc ccgtggacca caatgggcga
      781 gttgtcgttt gaaccaccgg tgtccacgcc cggcagtttt gtcgtgctgc gtgccgagat
      841 cgatctgatt gccgctttct cggcttgtcc acaggatatt ttgccgatca acggccgtgc
      901 ctgtcagccg gttgaggccc acttcatcat cagtgattga ttgcgatgtc gatcttacac
      961 gagccccccg aaccagtaat tcacaccaag gagatgacat gcttccggtt ttccatttga
     1021 tcggtggcgc acccactccg gtcgcgccat acagtcacgc ggtcgagcag gatggctggt
     1081 tattcatcac cggtcagctc gccaccgatc ccgacgacga tgcgcggcca atcccggacg
     1141 ggatcgaggc acaaacgcac aaagtgatgg acaatctgcg ccgcgtgctg aacgggcttg
     1201 gcgttgggtt ggagcatgtc ttgtgcgtgc gcgtgtttct gactgagttc aaacgtgatt
     1261 acgccgcgtt caatgcgatt tatcagagct attttccgcc gggccgcttg ccggcgcgca
     1321 ccaccgtcgg cgtgactgcg ctcgctcgcg acggcatcat cgaaatcgat atgattgccc
     1381 ggcggccgta gctgcaacca agtacgttcc cgcccggcgg tctggcgtga ttaaaaatca
     1441 tgcatatgcc tttgttacag cctggcgtcg ccaggtcgtc cgtactgggc tggctttcag
     1501 gccaagaatt gtgcgaacgt tcccgaagct cctcgacccg aaccggaatc agcaaagatg
     1561 ccagccagct tcctacgcct gacgcgcggc ccagcagcgt cgctcgctga cgggaactcc
     1621 cgggtgaagc aggcagccga ataatgccca aattccaacc ggccgagcgc accggcgccc
     1681 agagcctgca tcatctgccg gcgcgcgccg acaccgtgca ctggggatat ttcgacgccg
     1741 cgttggcccc ggcgatccgc gtgcgtagcg gcgatctgat ccgcgccgag gccattaccc
     1801 atcatgccgg cgatgcgccg cacctcatga tggatgccga gatccacgcg ctttacgccg
     1861 caatccccga gaccgaccgc gctcccggcg tacacatcat gaccggcccg atctacgtcg
     1921 aggacgcgtc gcccggcgac atgctggagg tgcgctacct ggaaatggtg ccgcgcttcg
     1981 cctttggatc caatctcgcg gcacattggg gccatcttta ccgagagatg gcggaacgtg
     2041 aacgcgtaac gatctatcgc atcgatcgcg caaccaatct ggcggctgcc gaattcgcct
     2101 atgacgtcaa ggaaaaatac accatcccgg gccgtatcac cgactgcgct gcgtgcgact
     2161 gccagcctgc gttgcgaggg gtgcgcgtgc cggtgcggcc gcatcttggc accgccggtg
     2221 ttgctcccga cgtgcccggc cgcgtcagca gcgtccctcc tgggctgcac ggcggcaaca
     2281 tcgacaactg gcgtatcggt gccggtgcca cgatgtatta tccggtgcag gtgccaggcg
     2341 cgttgttctc ggtcggcgat ccgcatatct cgcagggcga cggcgaaatc agcggcactg
     2401 cgatcgaggc ctcgctcgac gtgctgttcc aggtgcacgt gcgcaaagat tttcactttc
     2461 cgtcgccgct gttggaaacg ccgcgcttct ggatcgtgca cggtttcgac gaggacctga
     2521 acgtggccat gcggaacgcc agcctggaca tgatacggtt gctgaccgag cagcaacaac
     2581 tcagccacga cgacgcttac tcgctgatga gcgtggccgc ggattttgcc gtgacccagg
     2641 tggtggacgg caaccagggc attcactgcc ggattgcacg cagcgtgttc ggccgggatt
     2701 gaacgccgcc gggctttgcc gccaatgaga tggtgcagcg cacgcggaag ccttatatgc
     2761 ttcgccgcgt caggtccaaa tcaactcagg ccaatcgcgt tgccgggccg gcaggcggct
     2821 ctgcgaccgg gcgccgaacc atgggacgag gggacatcct gcaattcgct gctcggagag
     2881 ccatattggc cggcgtttgg ttccggctga cagcgacctg ccggaggcag aggttggctg
     2941 aatgcctggc gccgcccggg cgatggttgg atatcgacga aaaatctcgg aaagatcagt
     3001 aagatggcaa gctaccaata cgtttatgtg atgaaagacc tgaccaagaa cttccccggc
     3061 ggccgggagg ttttcaaggg cattaccctg tcgttcctgc cgggcgtgaa aatcggcgtg
     3121 ctcggcgtca acggcgccgg caagtccacg ctgatgaaga tcatggccgg cctcgaaacc
     3181 gagttcggcg gcgaggcctg ggctgcccct ggagcaaccg tcggttacct cgctcaggaa
     3241 ccgagattgg acccggacaa gacggtcggc cagaacgtcg aggaggcgtt taccgacctc
     3301 aaggccgcgc tcgaccgctt caatgaaatt tccacgaaat tcgccgaacc gatgaccgat
     3361 gacgaaatga acaatctgct ggtcgaacaa ggcgacctgc aggagaaaat cgacagccag
     3421 gatgggtggg aactcgaccg ccgcgttgac atcgcgctgg atgcgctgcg ttgccctccg
     3481 gcggacgcca aggtcacgac gctgtcgggc ggcgagcggc gccgggtcgc gttgtgcaag
     3541 ctgctgctgg aaaagcccga tttgctgctg ctggacgagc cgaccaatca cctggacgcc
     3601 gaaagcgtgg cctggctgga aaaaaccctg cacgattatg caggcacggt catggtggtg
     3661 acgcatgacc ggtatttcct cgacaacgta acgaactgga tcctggagat cgagcgcggc
     3721 cgcggctttc cgttcgaagg caattactcg acctggctgg aacagaagtt gaaacgtctg
     3781 cgtcaggagg agaaagagga aagtgctcgc caacgggcct tgtcggccga gcaggaatgg
     3841 atccagtcct cgccgcgcgc gcgccagacc aagaaccgcg cccgcatcca gcgttatgaa
     3901 gaactgcagc agaaatcgct ggagcaggcc ggtggtgtgg ccgacatcgt cattccgccc
     3961 gggcctcggt tgggcaacgt ggtgatcgag gccgaggcgg tgcgcaaagg ctacggcaac
     4021 aatctgctga tcgacgatct taacttcaaa ttgccgcctg gtgggatcgt tggcgtaatc
     4081 ggcccgaatg gcgccggcaa gacgacgttg ttccgcatga ttaccggcca ggaaaccccc
     4141 gataccggaa cgttacgcgt cggcgagacc gtcaaactgg gctatgtgga tcagtcgcgc
     4201 gacagtctca atccggatcg cacggtgtgg caggaaatct ccggtggtga cgaggtcatt
     4261 tatcttggta aacgggcgat ccagtctcgc gcctatgtgg cggcgttcaa cttcaagggc
     4321 tccgatcaac agaagaaggt cggcatcctt tcgggcggcg aacgcaatcg ggtgcatctg
     4381 gcgaagatgc tgaagcagga acacaacgtc attctgctgg acgaaccaac caacgacctg
     4441 gacgtcgata cgctgcgtgc gctggaggaa gcgctgaccg aatttgccgg ctgcgtggtg
     4501 atcatcagcc atgaccggtg gttcctcgac cggttggcga ctcacatgct ggcg
//
LOCUS       DATAVD010000563         4270 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_239426, whole genome shotgun sequence.
ACCESSION   DATAVD010000563 DATAVD010000000
VERSION     DATAVD010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4270
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239426"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="VHX39_10430"
     CDS             <1..249
                     /locus_tag="VHX39_10430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019091250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ELM1/GtrOC1 family putative glycosyltransferase"
                     /protein_id="HEX3991574.1"
                     /translation="ALADLIVVTQDSVSMISEAAATTAPVVVAELPGRSRRQGLFLKL
                     MCDEDRVRLFDGRFSPWRVTPMNDTPEAAATMRQRLGL"
     gene            257..2122
                     /locus_tag="VHX39_10435"
     CDS             257..2122
                     /locus_tag="VHX39_10435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007281931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991575.1"
                     /translation="MLNIQTFDAQAGGNVIYKALAHPLAGEAIARLYAGMTAPVAIYD
                     PGGIADALLAMYPLAVDKVFVHDVSLVGQRRAGRTAQALTELPCSGARTVLIAAFDAE
                     RAAARIRPMLPKGAEIVTLDAVRIPAAMLSVPGRYLEKLNFATNFVFFRDDDRMATRL
                     VSANYWSNHGARTVRLWLLLFGADGETLASWEETLPEHGGGFAIDSREVRARFGLGPF
                     TGQLMLHAIGVAGHDIVKYALDTFATDNGASLSCTHDANAWPSDRFAGLPAPRADETV
                     TLWLQNSHAVPIPRGAIGLDRMGAERSVTLDQEIGPFATVAIDVGALLPGVSWPGQIE
                     LRAGRHVVRPRYEVTRAGRTRIAHVNVERDNLRPDPGIPALSPLLGRGYLLPFPILDR
                     SRFRSIVQPTPMATTQANLPIRLDVFDSEGRCVRQRFLGCVPRDHSVALEVEDVAAGH
                     AELVYDFRDGGEADGWLHALFRYEDRQSGHVAESSFGALIFNTAMTYRDEPQSYTGAP
                     PGLTTTLFLKLGFAARHSFAVLIYPASAAWHPRSSTELRLHHSTGLQIATEIVHIDCS
                     GSVMLWPHEVFGAAALTAAGANGYVLVRDATCRLFGYHGLMDDAGGFSLDHMFGF"
     gene            2141..2758
                     /locus_tag="VHX39_10440"
     CDS             2141..2758
                     /locus_tag="VHX39_10440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX3991576.1"
                     /translation="MRAADPPEREMAGFAEWISALIHNAQPVRIYTGCGTNPAAGFIN
                     IDIAPMLRPEDTRFDDREYFFFPFADVPWPIPDGCVDYVFNEDFIEHLSQKQQFCFLA
                     ETLRVLKPGNWHRVSTPCLIQAMRRHSHFEAGMRGVYTGEWDRWGHQVLFTHHSLGET
                     AKLAGYREVLFNQKNQAVSPLRGIDTRPWDDPDTLFGNIYADLLK"
     gene            2791..4011
                     /locus_tag="VHX39_10445"
     CDS             2791..4011
                     /locus_tag="VHX39_10445"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX3991577.1"
                     /translation="MAGTWITIGGGMTGYLAVPASGSGPGVLLLQEIFGVNAHMRDVA
                     DLYAEEGYVVLAPDLFHAMEQRVQLGYDGADLEKAFGFYQRFDLAGSIPDMIAAVAAL
                     RARPECTGKVGAVGFCLGGKLAWLAAARAGVDAAVSYYGVGIEESLHDLATINCPVTL
                     QFGETDKFVPEAARQAIAAAVAGKNVEIFVYPGADHGFNCPERPAFDKAASLMAHSRT
                     LTTLHNAIGPHYDLSALWEQHTYLEFGARDAEATMRTMVAEPYVNHIPTMTGGVGHDH
                     LLRFYQYHFIPKTPKDTRLVPISRTIGTDRIVDEMLFCFTHDIEIDWMLPGVPPSGRY
                     VEIPLVAIVHFRGDKLYNEHIYWDQASVLVQIGLLDPKLVPSAGIETAKKVLDKSLPS
                     NTLMRRWAESEGKP"
BASE COUNT          747 a         1249 c         1385 g          889 t
ORIGIN      
        1 gcgttggcgg atctgatcgt ggtgacgcag gacagtgtgt cgatgatctc ggaggccgct
       61 gccacgacgg ctccggtggt ggtcgcggag ttgccgggac ggtcgcgccg ccagggcctg
      121 ttcctgaagc tgatgtgcga cgaggaccgg gtccgcctgt tcgacggcag gttttcgccg
      181 tggcgggtca cgccgatgaa cgatacgcca gaggccgctg cgacgatgcg gcaacggctc
      241 gggttgtagc gttatcatgc tgaatattca gactttcgac gcgcaggctg gcggcaacgt
      301 catttacaag gcgctggcgc atccgctggc cggcgaagcg atcgcgcggc tttacgcggg
      361 catgacggcg ccggtggcga tctacgatcc tggcggtatc gccgatgccc tgctggcgat
      421 gtatccgctc gcggtggaca aggtgttcgt gcacgacgtg agcctcgtgg ggcagcgccg
      481 cgccggccgg acggcgcagg cactgaccga gctaccgtgt agcggtgccc gaaccgtgtt
      541 gattgccgcg ttcgacgccg aacgcgccgc tgcgcgcatt cgtccgatgc tgccgaaggg
      601 cgctgagatc gtgaccttgg acgcggtacg gattccggcg gcgatgcttt cagtgccagg
      661 tcgttatttg gagaaactga atttcgcgac caatttcgtg ttttttcgcg acgatgaccg
      721 catggcaacg cggctggtct cggccaatta ctggtccaat catggcgccc ggacggtgcg
      781 gctgtggctg cttctgtttg gtgccgatgg cgagacgttg gccagctggg aagagacttt
      841 gccggagcat ggcggcggtt ttgccatcga cagccgggaa gtccgcgccc gcttcgggtt
      901 agggccattc accggccagt tgatgctgca tgcgatcggt gttgccggcc atgatatcgt
      961 gaaatatgca ctggatacgt ttgccaccga taacggcgcc agcctgtcct gcacacatga
     1021 tgccaacgcc tggccgtccg atcggttcgc cggcctgccc gcgccgcgtg ccgatgagac
     1081 agtgacattg tggctgcaaa acagtcatgc ggtgccgatc ccgcgtggcg caatcggcct
     1141 cgaccgcatg ggcgcggagc gttcggttac tttggatcag gagatcggcc cgtttgccac
     1201 cgtcgcgatc gacgtcgggg cgttgctgcc tggcgtgagc tggcccgggc aaattgaact
     1261 ccgcgccggc cgccacgtgg tccgaccgcg ttacgaggta acccgagcag gccgcacccg
     1321 catcgctcat gtcaacgtcg agcgggacaa tctgcgtccc gatcccggaa ttccggcttt
     1381 gtcgccgctg ctcggccgcg gctatttgtt gccgtttccg atcctggacc gcagccgctt
     1441 ccgttcgatc gtgcaaccga cgccgatggc gaccacgcag gcaaacctgc cgatccgcct
     1501 ggatgttttc gacagcgaag gccggtgtgt caggcagcgt ttcctgggat gcgtgccgcg
     1561 cgatcattcg gttgcactgg aggtcgagga cgttgccgcc ggccatgccg agctggtcta
     1621 cgattttcgc gacggcggcg aggcggatgg ttggctgcat gcgctgttcc gttacgagga
     1681 ccggcagtcc ggccacgtcg ccgagtcaag ttttggggcg cttatcttca ataccgcaat
     1741 gacgtatcgc gatgagccgc aatcctacac cggcgcgccg cccggactga ccactacctt
     1801 gtttctcaaa cttggctttg cggcgcggca cagtttcgcg gtgctgattt atcctgcctc
     1861 tgccgcctgg catccgcgct cgtcgaccga gctgcggctg catcacagta ctgggctgca
     1921 aatcgccacc gaaattgtgc acattgactg ctccggttcg gttatgctgt ggccgcatga
     1981 ggtgttcggt gcggcagcgc tgacggccgc cggtgccaat ggttacgtgc tggtgcggga
     2041 tgccacgtgc cgcctgttcg gctaccatgg gttgatggat gatgcggggg ggttttcgct
     2101 cgatcatatg ttcggcttct gaacaatcca ggacactgaa atgcgcgctg cggatcctcc
     2161 agaacgagag atggctggtt ttgccgagtg gatttctgcg ctgatccaca atgcgcagcc
     2221 ggtgcggatt tataccggct gcggcacaaa tccggcggcc gggttcatca acatcgacat
     2281 tgcaccgatg ttgcggcccg aggataccag attcgacgac cgggagtatt ttttcttccc
     2341 gtttgccgat gtgccctggc cgatccccga tggctgcgtg gattacgtct tcaacgagga
     2401 tttcatcgaa catctgagcc agaaacagca attctgcttc ctggcggaga ccttgcgcgt
     2461 gttgaagcca ggtaactggc atcgtgtcag cacgccgtgc ctgatccagg cgatgcgccg
     2521 gcattcgcat tttgaggccg gtatgcgtgg ggtctacacc ggagagtggg accgctgggg
     2581 acatcaggtg ctgttcacgc atcactcact gggggaaacc gcgaaactgg cgggttaccg
     2641 tgaggtgctg ttcaatcaaa agaaccaggc ggtgtcgccg ctgcgcggga tcgacacacg
     2701 gccatgggac gatcctgata cgttgtttgg caatatctac gccgatctgc tgaagtaacc
     2761 cgatccgttc aaataacgag gagagcgcaa atggccggca cctggatcac gatcggcggc
     2821 ggcatgaccg gttacctcgc ggttccggcg agtgggtcgg gtccaggcgt gctactgctg
     2881 caggaaattt tcggcgtgaa cgcgcatatg cgggatgtcg ccgatttgta tgccgaagaa
     2941 ggttatgtcg tgctcgcccc cgatttgttt cacgcgatgg aacaacgcgt gcagcttggt
     3001 tacgacggtg ccgatctgga aaaggcgttc ggcttctatc agcgcttcga tctcgcgggt
     3061 tccattcccg atatgatcgc cgcggttgcc gcgctacgtg cccgccccga atgcaccgga
     3121 aaagtcggtg cagtcggctt ctgtctgggc ggcaagctcg cctggctggc ggcagcgcgg
     3181 gccggagtgg atgccgcggt cagttactac ggcgtcggca tcgaggagtc gctgcacgat
     3241 ctggccacga taaattgtcc ggtgacactg caattcggcg agaccgataa gttcgtgccg
     3301 gaggcggcgc gccaggcgat tgccgcggcg gttgctggaa aaaatgtcga gattttcgtg
     3361 tatcccggcg ccgatcacgg cttcaattgt ccggagcggc cagcgttcga caaagccgcc
     3421 tcgttgatgg cgcattcgcg gacactgacg acgttgcaca atgccattgg tccgcactac
     3481 gatctttcgg cactgtggga acagcacacc tatctggaat tcggcgcccg cgatgccgag
     3541 gcgacgatgc gcaccatggt cgccgagccc tatgtcaacc acatcccgac gatgacgggc
     3601 ggtgttggcc acgatcatct gttacgattt taccagtacc atttcatccc gaaaacaccg
     3661 aaggacacgc ggctggtgcc gatcagccgc accatcggca ccgaccgcat cgtcgatgag
     3721 atgctatttt gtttcactca cgacattgaa atcgactgga tgctgccggg tgttccgccg
     3781 tccggccgtt atgtcgaaat cccactggtg gcgatcgtgc atttccgcgg cgacaaactt
     3841 tacaatgagc atatctactg ggaccaggcg tcagtgctgg tgcaaattgg gctgctcgac
     3901 ccgaaactgg tgccgtcggc cgggatcgaa acggcgaaga aagtgctcga taagtcgctg
     3961 ccatcgaaca cgttgatgcg gcgatgggcg gaaagcgagg gcaaaccctg aactgaggaa
     4021 gcgccagggc tccgccctgg aacccgccag gaggctttgc ctcctggacc tccagcaaag
     4081 gtcgaggagc tttgcaatct gtccattggt tggggaaagg gagagggccg actgtggcgc
     4141 ttttcaaggt ctgtgtcggc cctctcccat tccccaacca aaatgaatgg ttccaagggc
     4201 cgccgccctt ggcggggtcc aggggcagcg gccctggtcg gggttcgggg tgaaaccccg
     4261 ccgctacccc
//
LOCUS       DATAVD010000564         1811 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2100348, whole genome shotgun sequence.
ACCESSION   DATAVD010000564 DATAVD010000000
VERSION     DATAVD010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1811
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2100348"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(361..1473)
                     /locus_tag="VHX39_10450"
     CDS             complement(361..1473)
                     /locus_tag="VHX39_10450"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEX3991578.1"
                     /translation="MDEPKHLHEPGGDFQCLHEFIPVARKKLSDHTWGYLVGAAESET
                     TLRRNRMAIDSLALRPRVCVDVSKIDASTKLFGKTWRLPMFLCPVGSLESFDPGGAAT
                     AGRAASAFGVPIMCSSVTHPGLEEIAAAAPGPKIFQLYVRGDTAWVDEVVKRAVGHGY
                     DAFTITVDTAAYSRRERDIAGRFVKPWRAAATGHTYQAGFTWDNVKHFKDTHSIPLIL
                     KGIATAEDAALCCEHGVDGVYISNHGGRQLDHGRGSLDVLPEVMAAVRGRAKVMIDGS
                     FCRGTDIVKAIALGADAVGMGRMYCYALAADGDAGVNKMLELLEHEVGVAMALSGARS
                     LNELNPSFVFRNAPVVAQPHQHSAFPLLQETPEFRG"
     gene            complement(1544..>1811)
                     /locus_tag="VHX39_10455"
     CDS             complement(1544..>1811)
                     /locus_tag="VHX39_10455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3991579.1"
                     /translation="LGLMLPLIAADLTQKTGHLNLAIGAFGLAVGLGATFSTTGAGWV
                     ADRVGVDWAFLGLALVGLIATMLLALAMPETRPATETASAPVLA"
BASE COUNT          351 a          612 c          513 g          335 t
ORIGIN      
        1 gggaaacggg ttgcttcggt aataccgcgc cactcctcac ctgtactgga gatcagtgtg
       61 catctgttta gaatatttga cctggccagg atcatctccg gcccgaaaat tgttgcgctc
      121 gctctcgctg ccagacgtca caaataaccc gataccaact ggcagaatga atgactttca
      181 ggaacctatc tccatcgggc atggcctgcc gatccattga ggccggtgcc gatcgagatg
      241 gccggcataa cgggatcgaa cccatttcaa tcgttcaatc atgccaaagc ccggccctgc
      301 gaacgcgagg gctgggccat gtcagtccgg acttgcgaca atcggcaata acgcgtgcga
      361 ttacccccga aactccggcg tctcctgcaa cagcgggaac gcgctgtgct gatgcggttg
      421 cgccacgacc ggtgcattcc tgaacacgaa cgacgggttc aactcgttca acgaccgagc
      481 cccggacagc gccatcgcca cgcccacctc gtgctccagc agttccagca tcttgttcac
      541 cccggcatcg ccgtccgccg ccagagcata acaatacatc cgtcccatcc ctaccgcgtc
      601 ggcgcccaga gcaatcgctt tgacgatgtc cgtgccgcgg cagaagctgc catcgatcat
      661 gactttcgca cggccgcgca ccgccgccat gacctcaggc agcacatcga gcgagccgcg
      721 gccatgatcc agttgccgcc cgccgtgatt ggaaatgtac acgccgtcga caccgtgctc
      781 acaacacaaa gcagcatcct cagccgtggc gatgcccttc aggatcagcg ggatcgaatg
      841 cgtatccttg aagtgtttga cattgtccca ggtaaacccg gcctggtaag tgtgccccgt
      901 tgccgcggcg cgccacggct tgacgaagcg tcccgcgata tcccgttccc gtctggaata
      961 ggccgcggta tcgacggtga ttgtaaacgc atcatagccg tggccgaccg cccgcttcac
     1021 cacctcatca acccaggcgg tgtcgcctcg cacgtataat tggaagattt tcgggccggg
     1081 cgcggccgcg gcaatttcct caaggccagg atgggttacc gagctgcaca tgatcggcac
     1141 gccgaatgcc gaggcggcac gtcccgcggt cgccgctcca cccggatcga acgattccag
     1201 cgagccgacc ggacacagga acatcggcaa ccgccaggtc ttgccgaaca atttcgtcga
     1261 tgcgtcgatc ttagacacgt ccacgcagac gcgcgggcgc agcgccagac tgtcgatcgc
     1321 catccggttg cgacgcagcg tggtttcgct ttccgccgct ccgaccaggt atccccatgt
     1381 gtggtccgac agtttcttgc gtgccaccgg aatgaactcg tgcaggcact ggaaatcgcc
     1441 gccgggttcg tgcaggtgct tgggttcgtc catggccggt cctccgtttg ctgtggctgg
     1501 tatcaggcat gcgcggcgcg cttcgtgcaa gagccgcccc cgatcacgcc aggactggcg
     1561 cactcgcggt ctcggtcgcc ggtcgcgttt ccggcatcgc caatgccaac agcatcgtcg
     1621 cgatgaggcc cacgagtgcg aggccaagaa acgcccagtc gactcccacc cggtccgcga
     1681 cccatccggc acccgtcgtg ctgaatgttg cgcccagtcc aaccgccagg ccaaaggcgc
     1741 cgatcgcgag gttcaaatgt ccggttttct gggtcaggtc cgcagcgatc agtggcagca
     1801 tcagcccgag c
//
LOCUS       DATAVD010000565         2587 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2100430, whole genome shotgun sequence.
ACCESSION   DATAVD010000565 DATAVD010000000
VERSION     DATAVD010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2587
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2100430"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..320
                     /locus_tag="VHX39_10460"
     CDS             <1..320
                     /locus_tag="VHX39_10460"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3991580.1"
                     /translation="HIRVFDVDGGQLQNGRVFADDFAPGMTDGLRCDLDGNVWCSMGW
                     GDPAEDGVRCYAPDGVLIGKVHLPEGCANLCFGGVKKDRLFMCASTSVYALYINGRGA
                     MIP"
     gene            complement(369..1418)
                     /locus_tag="VHX39_10465"
     CDS             complement(369..1418)
                     /locus_tag="VHX39_10465"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3991581.1"
                     /translation="MEFGVFHEFPALVGRPDSSAFEEAFEIVDGAERWGLDVMWLAEL
                     HFDPLRSVLSSPMCIASAIAARTKRIKIGVAVQVLPLGNPLRIAEEAATVDHISHGRL
                     IFGAGRSGVAKTYEAYNVPYAESKDRFNETLEIVRRAWTETNFSHSGTYFQFEDVTVT
                     PRPFQSPMPPIRVAATSPDTFVSIGELGMPIFIAIRHEDARHFTPQIAAYRKAWKASG
                     HPGNGEVFLRAPGFVAATAAEAKAHYEASLLHYFHAQGRLLADSAARLGLDPANPRWK
                     TSEGLMTMTYDQAIQGSVMIGSPAEVVRKIQALRDDMGLDGVLLELNCGGKVEHAHEM
                     EALRLLCQEVQPAFH"
     gene            complement(1495..1953)
                     /locus_tag="VHX39_10470"
     CDS             complement(1495..1953)
                     /locus_tag="VHX39_10470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991582.1"
                     /translation="MASIQKRIAYGFVAAVISVLIFHQGMWATLHYLNLPGLGMPPPF
                     PMDAVPPLGVPRILSLCFWGGLWGALFGAVWHGRRASYCWAGIILGVCASLFGFFVVA
                     AIKGSPIGGGWVLNTWIRSLLINGTWGLGVGLLLAVLPDQTTSRDSTARA"
     gene            2063..>2587
                     /locus_tag="VHX39_10475"
     CDS             2063..>2587
                     /locus_tag="VHX39_10475"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3991583.1"
                     /translation="MSISINPISEQFAAEIAGIDLARPLDDTDVAAIWQASDTYAVLV
                     FRNQSLSDTGLHDFAARFGPLEVGRGALQPGRRRLSIPQIGDISNLDVDNKVRDLHDR
                     RRLDSLGNRLWHTDASYMPVPVVLGMLHAVALPPSSPFGNGETEFADMRAAYDALPDT
                     TKDAINDLVVEHDIF"
BASE COUNT          532 a          790 c          763 g          502 t
ORIGIN      
        1 cgcatattcg ggttttcgac gtcgatggcg gacagctaca gaatgggcgg gtgtttgctg
       61 atgatttcgc gcctggcatg actgacgggc tgcgttgcga tctcgatggc aatgtctggt
      121 gttcgatggg atggggcgac ccggctgagg acggcgtgcg gtgctacgcg cctgatggtg
      181 ttctgatcgg caaggtccat ctgccggagg gttgcgccaa tctgtgcttc ggcggagtca
      241 agaaagaccg gctgttcatg tgcgccagca catcggtcta tgcgctgtac atcaacgggc
      301 ggggcgcgat gattccgtaa cggtaaagcg cattcgacac acgcgcgctc gtgtaacccc
      361 ttgcgtggtt aatgaaacgc cggctgcact tcctggcaca agagccgcag tgcctccatc
      421 tcatgcgcat gctcgacctt gccgccgcaa ttgagttcga gcagcacgcc atcgaggccc
      481 atgtcatcac gcaacgcctg gattttgcgg acgacctcgg ccggcgagcc gatcatcacc
      541 gatccctgga tcgcctgatc gtaagtcatg gtcatcagac cctcggacgt cttccaccga
      601 ggatttgccg gatcaagtcc caaacgtgcc gctgagtctg ccagcaaccg gccctgggcg
      661 tgaaaataat gcagcagact ggcctcgtag tgcgctttcg cttcggctgc cgttgctgca
      721 acgaacccgg gcgcgcgcag gaacacctcg ccgttgcctg gatgaccgga tgccttccag
      781 gctttgcgat aggcggcgat ctgtggagtg aaatgccgcg catcctcgtg ccggatcgcg
      841 atgaagatcg gcataccgag ttcaccaatc gaaacgaagg tatcgggact ggtcgccgcg
      901 acacggatcg gcggcatcgg cgattgaaac ggccgcggcg tgacagtgac atcctcgaac
      961 tggaaatacg tgccgctgtg cgaaaagttc gtttcggtcc atgcgcgccg cacaatttcc
     1021 aaagtttcgt tgaaccgatc cttactttct gcgtacggca cgttgtaggc ttcgtaggtc
     1081 tttgccacgc cactgcggcc ggcgccaaag atcagccggc cgtggctgat gtgatcgacg
     1141 gtagcggctt cctcggcgat gcgcagtgga ttgccgagcg gcagtacctg cacggcaacg
     1201 ccgatcttta tccgtttcgt gcgcgcggcg atcgcgctgg caatgcacat cggcgaggac
     1261 aacaccgaac gcagtggatc gaaatgcagt tcggcgagcc acatgacgtc gagtccccag
     1321 cgttcagcgc catcgacgat ttcgaacgct tcctcgaacg cactggagtc gggacgaccg
     1381 accaacgcgg gaaattcatg aaaaaccccg aattccatgg ctgaacctct tctggcaacg
     1441 ccggggattt cgacattgcc ggcagcatcc gtcaacagtc tgtcatggtc gccgttacgc
     1501 ccgcgcggtg ctgtcccgcg aagtggtttg gtccggcaga accgcgagca acaggccaac
     1561 gcccagtccc caggttccgt taatcagcag cgacctgatc caggtgttca gcacccaacc
     1621 gccgccgatc ggtgaacctt tgattgcggc cacgacgaaa aaaccaaaca gcgatgcgca
     1681 cacgccaaga ataataccgg cccagcagta tgaagcgcgt cgtccatgcc agactgcgcc
     1741 gaacagtgcg ccccacaggc cgccccaaaa gcacagactg agaattctcg gcacgcccaa
     1801 cggcggtaca gcgtccattg gaaatggcgg cggcatgcca agtcccggaa ggttgagata
     1861 gtgcagagtt gcccacattc cctgatgaaa gatcagaacc gaaatgactg cggcaacgaa
     1921 accgtatgcg atgcgctttt ggatgctggc catggaacca cccctgagtg tgccgcctac
     1981 ccgtggtaac ggcgcgccac tctgttgttc ggcgagactt taggccaaaa tgccgcaacc
     2041 tgacaaatca gcaggagtgg tcatgtccat aagcatcaac ccaatcagtg agcaatttgc
     2101 agccgagatc gccgggatcg acctggcgcg tcccctcgac gacaccgacg tcgccgcgat
     2161 ctggcaggcc agcgacacct atgcagtcct ggttttccgc aatcagtctc tgagcgatac
     2221 cgggttgcac gacttcgctg cccggttcgg tccgctggaa gtcggccgcg gcgccttgca
     2281 accaggccgc cgccggctgt caattccgca aattggcgac atttccaacc tggacgtcga
     2341 caataaggtg cgtgatttgc acgaccggcg ccggctggat tcgcttggaa accgactttg
     2401 gcacactgat gcgtcatata tgccggttcc ggttgtgctc gggatgctgc atgccgtcgc
     2461 cctgccccca tcgtcgccgt tcggcaatgg cgagaccgag ttcgccgaca tgcgcgccgc
     2521 ctacgacgct ttgccggaca cgacaaaaga cgcgatcaat gatctcgtgg tggaacacga
     2581 catattc
//
LOCUS       DATAVD010000566         1522 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3030538, whole genome shotgun sequence.
ACCESSION   DATAVD010000566 DATAVD010000000
VERSION     DATAVD010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3030538"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..211)
                     /locus_tag="VHX39_10480"
     CDS             complement(<1..211)
                     /locus_tag="VHX39_10480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX3991584.1"
                     /translation="MRCDEVQDLASAWLDNELSEPRAGAVAEHEAHCEACHAYISDLR
                     LLAEQMAQLGREPAPPGLADKIRLAL"
     gene            complement(201..764)
                     /locus_tag="VHX39_10485"
     CDS             complement(201..764)
                     /locus_tag="VHX39_10485"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX3991585.1"
                     /translation="MPAAKGFEQQALPHLDAAYSLAFWLMRDRADAEDVVQDAYVRAL
                     RGFAGFRGEAMRPWLLAIVRNVAWRALAVRRRSTNNVIPIEAAFARGGEADPEPLEIA
                     SDEPSAETRMIEAGDQALLNRALDAVTPLFREILVLREIEDMSYGEIATVLGVPQGTV
                     MSRLSRARTELRLRYKDLAKETGRHAV"
     gene            complement(914..>1522)
                     /locus_tag="VHX39_10490"
     CDS             complement(914..>1522)
                     /locus_tag="VHX39_10490"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX3991586.1"
                     /translation="MKSYEMLRAPFDGTIVARFVDPGALVSNAGANMTSSQPVLTIAD
                     TSKLRVDIYVEQRDVPFVHVGDVADVSDASHSDRTVKATIARTSGQLDPRTRTLFAEL
                     EVDNKDHFLVPGSFAYVTLHVPVESFPEIPAAALITRGANTFVADVGDDTVVHIRSVR
                     LARSNGTIVALREGVKVGQRVALNVPDEIVEGSRVQPQEAVR"
BASE COUNT          284 a          503 c          450 g          285 t
ORIGIN      
        1 caagcgccag gcggatcttg tcggcaaggc ccggtggtgc cggttcgcgc cccaattgtg
       61 ccatctgctc cgccaaaagc cttaggtctg aaatataggc gtggcaggcc tcacagtgcg
      121 cctcgtgttc ggcgaccgct ccggcgcgag gctcggacaa ttcgttgtcc agccaggcgc
      181 tcgccagatc ctggacctcg tcacaccgca tgtctgccag tctccttagc gaggtccttg
      241 taacgtaacc ggagttccgt acgcgcccga gacaggcgcg acatcacggt accctgtggc
      301 accccaagga cagtggcgat ttcgccatac gacatgtcct cgatttcccg cagcaccaat
      361 atttcccgga acaacggagt caccgcgtcc aacgcccggt tcaacaatgc ctggtcgccg
      421 gcctcgatca ttctggtttc ggccgagggt tcatcggatg cgatctcgag cggctccggg
      481 tccgcttcac cgccgcgggc aaatgccgcc tcgatcggga tcacgttgtt ggtggagcgc
      541 cgccgcacgg cgagtgcccg ccaggcgacg tttcgcacaa ttgccaacag ccaggggcgc
      601 atggcctcgc cgcgaaaccc agcgaaccca cgcaatgcgc ggacataggc gtcctgcacg
      661 acatcctcgg cgtcggcgcg atcacgcatc agccagaacg cgagcgaata cgccgcgtcc
      721 agatgcggca acgcctgttg ttcaaaacct ttcgctgcag gcaaaggggg cctcggacgt
      781 agtttcggat cactatggag agagataccg ggcgagacgt tttattcccg ggaattcttc
      841 gggtggcgtt gcccccgtca aatccgccag gttgctcggt cccccacaca tagccgcccg
      901 aaggggtttc cccctatctc acggcctcct gtggctgcac gcggctgcct tccacgattt
      961 cgtccggcac attgagcgcg acgcgctggc caaccttcac gccttcgcgt aacgccacga
     1021 tcgtcccatt cgagcgcgcc agtcgtaccg accggatatg cacgaccgta tcgtctccga
     1081 catcggcgac gaacgtgttc gcaccacggg tgatcagcgc ggcggccggg atttccggga
     1141 agctttcgac cggcacgtgc agcgtgacgt aagcgaagct gcccggtacc aggaagtggt
     1201 ctttgttatc gacctccagc tcggcgaaca gcgtgcgcgt gcgagggtcg agctgacccg
     1261 aggtccgcgc gatcgtcgct ttaaccgtgc gatcggaatg ggacgcgtcc gatacgtccg
     1321 ccacgtcgcc aacatgcaca aacggtacgt cgcgttgttc gacgtaaatg tcgacgcgca
     1381 acttcgaagt gtccgcgatg gtcagcaccg gttgcgaact ggtcatgttc gcaccggcgt
     1441 tggacaccag agctcccgga tcgacaaagc gcgcaacgat ggtgccatcg aacggcgccc
     1501 gtaacatttc gtatgacttc at
//
LOCUS       DATAVD010000567         1777 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_611826, whole genome shotgun sequence.
ACCESSION   DATAVD010000567 DATAVD010000000
VERSION     DATAVD010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1777
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_611826"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..926
                     /gene="panC"
                     /locus_tag="VHX39_10495"
     CDS             <1..926
                     /gene="panC"
                     /locus_tag="VHX39_10495"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEX3991587.1"
                     /translation="ECDFACEFHAGLPCCRTMLPWERSLSKLRAMRVARTLAELHSAV
                     ADLRTTHDAIGLVPTMGALHDGHRALVRAAVMSGAAAVTSIFVNPLQFGAAEDLSRYP
                     RDEAGDLATLEACGCALVWLPNAATMYPHGDATTISVTGPAENWEGSARPGHFRGVAT
                     VCAKLFGQVEADRAYFGEKDWQQLQVIRRMVGDLHLPLSIVPVVTVREPDGLALSSRN
                     RFLGKSERALAPLLHSELTETAGMIADGRAADGPLHRARERLTNAGFDVGYFALVDGP
                     TLLEIPRAGPGARLIAAAGIGSVRLLDNVAA"
     gene            978..>1777
                     /locus_tag="VHX39_10500"
     CDS             978..>1777
                     /locus_tag="VHX39_10500"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX3991588.1"
                     /translation="MRAAIFRDGQIRVGTVPDPVPEQGQVLVKTLCCGICGSDLHAAK
                     FTSQFAELGRRSGGRLGMDPGRDIVFGHEFCCEIVEYGPGTPQRLKSGTLVCSMPMTL
                     RGNEVLGVGYNNDIAGGYGQYMPLADRMLLEVPNGLSAEHAALTEPVAVGWHAVQFAR
                     MTADDVPLVIGCGPVGLAVIAALKIKGAHPIIAADFSPARRALAERMGADIIVDPAAD
                     SPYNSWRDAATPQGYDPSRYARLFNIGPKQRPGVIFECVGVPGVIQQV"
BASE COUNT          302 a          529 c          582 g          364 t
ORIGIN      
        1 acgagtgcga ttttgcctgc gagtttcatg ctggtctccc atgctgccgc accatgttgc
       61 cttgggaacg cagcctgtcc aagctgcggg ccatgcgtgt tgctcgaacc ctcgccgaat
      121 tgcattcggc agtcgcagac ctgcgcacga cgcatgatgc gattggcctg gttccaacca
      181 tgggcgcgtt gcacgacggc catcgcgcgt tggttcgcgc ggcggtgatg tccggtgcag
      241 cggcagtaac gtccatcttc gtaaatccgc tgcagtttgg cgcggctgaa gatttatcac
      301 gttatcctcg cgatgaggcg ggtgacctgg cgaccctcga ggcgtgcggg tgtgctttgg
      361 tttggctacc gaatgcggca accatgtatc cgcatggcga tgctaccacg atttccgtta
      421 ccggaccggc ggagaactgg gaaggctctg ccaggcccgg ccatttccgc ggcgttgcga
      481 cggtttgtgc gaaactgttc ggccaggtcg aggcggaccg ggcctatttt ggggagaagg
      541 actggcagca actgcaggtc atacgcagga tggtgggcga cctacatctg ccgttatcga
      601 ttgttccggt tgtgacagtc cgcgagccgg atggtctcgc actttcgtca cgcaaccgat
      661 ttcttggcaa aagcgaacga gcgcttgcgc cactgctcca ttccgagctg accgagactg
      721 caggcatgat cgctgacgga cgcgctgccg atgggcctct gcatcgcgca cgtgagcggc
      781 tgactaatgc cggtttcgac gtcggttatt ttgccctggt cgatggtccg acactgctgg
      841 aaattccgcg cgccggccca ggggcacgat tgattgccgc ggcggggatt ggttcggtgc
      901 gcctgctcga taatgtcgcg gcttgaggag atcgagcgga accgcctacc ctgaggcgaa
      961 acctcggagg ccatgacatg cgtgccgcca ttttccgcga tggacaaatt cgtgtcggca
     1021 cagtgcctga tccggtcccg gagcaaggcc aggtgctggt gaaaacgctg tgctgcggca
     1081 tttgcggttc cgacctccac gcggcgaagt tcaccagcca gttcgccgaa ctcggccgcc
     1141 gatccggtgg ccgtctgggc atggaccccg gccgcgacat cgtgttcggc cacgaatttt
     1201 gttgcgagat cgttgagtac ggtcccggaa cgccgcagcg gttgaagtcc ggcacgctgg
     1261 tctgctcgat gccaatgacg ttgcgtggca acgaggtgct cggcgtcggc tacaacaacg
     1321 atatcgccgg cggttatggc cagtacatgc cgctcgcgga ccgaatgctg ctggaagtgc
     1381 cgaacggact atccgccgag cacgcggcgc tgaccgaacc ggtggctgtc ggctggcacg
     1441 cggtgcaatt cgcgaggatg acggcggacg acgttccgtt ggtgattggc tgcggtccgg
     1501 taggtctcgc ggtgatcgct gccctgaaga tcaagggcgc gcatcccatc atcgccgcgg
     1561 atttctctcc ggcgagacgt gcgctggctg aacgcatggg cgccgacatc attgtcgatc
     1621 ccgcggcgga ctcgccatac aactcctggc gagatgccgc cacgccgcag ggttacgacc
     1681 ccagccgcta cgcgcgactg ttcaatattg ggccgaaaca acggcccggc gttattttcg
     1741 agtgcgtcgg agtgccaggc gtgatccaac aggtcat
//
LOCUS       DATAVD010000568         2491 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2474408, whole genome shotgun sequence.
ACCESSION   DATAVD010000568 DATAVD010000000
VERSION     DATAVD010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2491
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2474408"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..994
                     /gene="eno"
                     /locus_tag="VHX39_10505"
     CDS             <1..994
                     /gene="eno"
                     /locus_tag="VHX39_10505"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEX3991589.1"
                     /translation="NKKKLGANAILGVSLATARAGADFCGLPLYRYLGGPCARLLPAP
                     MMNILNGGQHADNSVDVQEFMVMPLGFETFHDALRAGVEVFHSLKKVLKSGKFNTNVG
                     DEGGFAPDLPNNTAALDLILQAIEQAGYRAGEQMFIALDVAATEMFDAKQKTYEIDGK
                     RIDSAAMVDFLSGWVDKYPICSIEDGCSEDDWDGWGLLTKRLGAKVQLVGDDLFVTNT
                     RRLQRGIDGHVANSILIKVNQIGTLTETIDAISLAQRNAYTTVASHRSGETEDTTIAD
                     LAVALGTGQIKTGSASRTDRIAKYNQLLRIEEALAETAQYAGPELARKYRASLK"
     gene            1038..1454
                     /locus_tag="VHX39_10510"
     CDS             1038..1454
                     /locus_tag="VHX39_10510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991590.1"
                     /translation="MASWGACMSAPLRQTSVRFTASDSPWFWALLFSTGAFVALALIA
                     PQYAQRQRRLEMQFQARREVTRRQMAGERVARAPGSEGEAPPPALGELIIPLWPLALA
                     AASFTAVSAAMFWRDRRRALFANEHPEGGPAKKGSA"
     gene            1451..1993
                     /locus_tag="VHX39_10515"
     CDS             1451..1993
                     /locus_tag="VHX39_10515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991591.1"
                     /translation="MTWFVESIWPGLILGLAIETVLAVLWMQGARRAIAAAMALVAAA
                     TLGLIIIERLVVTRTEEVEDLLDEAARTLVANDPPRLLELFSPDSPRRKEVQSTLAHV
                     KVREAHVGGDLEISFNDHGALPTATAVFTGRIDAQDTTGRVPYEHMLGRFRVTLRREG
                     DRWRIYDYTAVDTRGRGPGP"
     gene            complement(2012..>2491)
                     /locus_tag="VHX39_10520"
     CDS             complement(2012..>2491)
                     /locus_tag="VHX39_10520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991592.1"
                     /translation="PADAADAAAEPADGAPAEEPGAQPAPAAAAQPAAAAPAAAVPVA
                     PPADGAAASADGAELKKAEVGVGVKGRDYGGPGFVTTPVMAKFSTEQRIAFEIQIPNA
                     MKIYKAAHDNKGPKTHEEFMNVIIKEHGVQLPDLPQGETYLYIPKTEELMVKVPQVK"
BASE COUNT          452 a          764 c          799 g          476 t
ORIGIN      
        1 gaacaagaag aagctgggcg ccaatgccat cctgggcgtg tcgttggcca cggcccgcgc
       61 gggcgccgac ttctgtggtc tgcccctata tcgttacttg ggtggcccgt gcgcgcgact
      121 gctgccggcg cccatgatga acatcctcaa tggcggccag catgccgaca actcggtcga
      181 cgtgcaagaa ttcatggtca tgccgctggg gttcgagacc tttcacgatg cgctgcgggc
      241 tggcgtcgag gtgttccatt ccctcaagaa ggtactcaag tccggaaagt tcaataccaa
      301 cgtcggcgac gaaggcggct ttgcgcccga cttgcccaac aacaccgcgg cactcgacct
      361 gatcctccag gcaatcgagc aggctggata tcgcgccggc gagcagatgt tcatcgcctt
      421 ggacgtggcg gccacggaaa tgttcgacgc caaacaaaaa acgtacgaga tcgacggcaa
      481 gcgaatcgac tcggccgcca tggtcgattt cctgtccggt tgggtcgata aatatccgat
      541 ctgctcaatc gaggacggtt gcagcgaaga cgattgggac ggttggggtc tgctgacgaa
      601 gcgacttggc gccaaagtcc aattggttgg cgacgacctg tttgtcacca acacccgccg
      661 cctgcagcgc ggcatcgacg gccacgtggc caacagcatt ttgatcaagg tcaaccagat
      721 cggcacgctt accgaaacca tcgacgctat cagcctggcg cagcgcaacg catacacgac
      781 ggtggctagc catcgcagcg gagagaccga ggacacgacg atcgccgacc tggccgtggc
      841 gctgggaacc ggacagatta aaaccggttc ggcctcgcgc acggatcgca ttgccaagta
      901 caatcagttg ttgcgtatcg aagaagcctt ggctgaaacc gcccagtatg ccggtccaga
      961 attggcacga aagtaccgcg ccagcctaaa atagcgactg gccgccggcg gtgcgttcgc
     1021 ggcgactcgt ggcagtcatg gctagctggg gcgcgtgcat gtcggctcct ttgcggcaaa
     1081 catctgtccg cttcacggcc agcgactcac cctggttctg ggcgttgctc ttctcgaccg
     1141 gcgcttttgt ggcgctagcg ctgattgcac cgcaatatgc ccaacgtcag cgtcggctag
     1201 aaatgcagtt ccaagcccgg cgtgaggtca cacggcgcca gatggctggc gaacgagtcg
     1261 cccgcgcgcc gggcagcgag ggcgaagcgc caccaccggc gctcggtgaa ttaatcattc
     1321 cgctgtggcc cttggcattg gccgccgcca gcttcactgc tgtctcggcg gcgatgttct
     1381 ggcgcgatcg gcgacgcgcc ctctttgcca atgaacaccc cgaaggtggt ccagccaaga
     1441 agggttccgc atgacctggt tcgtcgaaag catttggccg ggattgatac tcgggctggc
     1501 gatcgaaacc gtgctggccg tgctgtggat gcaaggtgca cgccgcgcga tcgccgcggc
     1561 catggccctg gtcgccgccg cgacgttggg gctgatcatc atcgagcgac tggtggtcac
     1621 gcggaccgaa gaggtcgaag atctgctgga cgaggcagcg cggacgttag tggccaatga
     1681 cccaccgcga ttgctcgagt tgttttcgcc tgatagtccc cgccgcaaag aagtccaatc
     1741 cacgctggcg catgtcaaag tgcgcgaagc tcacgtgggc ggtgacttgg aaatcagctt
     1801 caacgaccac ggcgccttgc cgaccgcaac ggccgtgttc acgggtcgca tcgacgcgca
     1861 agacacgacc ggacgggttc cctacgagca catgctcggc aggtttcggg tcacgttgcg
     1921 ccgcgaagga gaccgctggc ggatctatga ttacacggcg gttgacacgc gcggtcgcgg
     1981 tcccgggccg tgattgcagc gctggcgacg gctacttgac ctgcggcact ttgaccatca
     2041 gttcttcggt cttggggatg tacaaatagg tctcgccctg gggcaggtcc ggcagttgaa
     2101 ccccgtgttc tttgatgatc acgttcatga attcttcgtg tgtcttgggg cctttgttat
     2161 catgggccgc cttgtagatc ttcatggcgt tggggatttg aatctcgaag gcgatccgtt
     2221 gctcggtcga gaatttcgcc atgaccggtg tcgtgacgaa acccggcccg ccgtagtcgc
     2281 ggcctttgac gcccactccg acttcggcct ttttaagctc ggccccatcg gcgctggcag
     2341 ccgcgccgtc tgcggggggc gcgacaggaa cggccgcggc gggtgccgcc gccgcgggct
     2401 gcgcggcagc ggccggcgcc ggctgtgcgc cgggttcttc ggcaggcgcg ccatcggcag
     2461 gttcggccgc tgcgtctgcg gcatccgcag g
//
LOCUS       DATAVD010000569         4605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1729756, whole genome shotgun sequence.
ACCESSION   DATAVD010000569 DATAVD010000000
VERSION     DATAVD010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4605
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1729756"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..500)
                     /locus_tag="VHX39_10525"
     CDS             complement(<1..500)
                     /locus_tag="VHX39_10525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase"
                     /protein_id="HEX3991593.1"
                     /translation="MDAAVDWVRAQAYTVPTDFPEADGTATWDSTTIIVVHAGAAGRQ
                     GIGYSYADPSVAALIDGKLAPVVAERDAMDPPAAWRAMNVAVRNLGRAGLAATAISAV
                     DTALWDLKAVLLGQPLASLLGRYRTCVPIYGSGGFTSYDDGQLARQLAGWVETEGCRW
                     VKMKIGT"
     gene            complement(504..2285)
                     /locus_tag="VHX39_10530"
     CDS             complement(504..2285)
                     /locus_tag="VHX39_10530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010512005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HEX3991594.1"
                     /translation="MNVSEFVWHRLGEWGLKRVYGYPGDGVGGLDVALEKAKDRMEYI
                     QVRHEEMAAFMASGHAKFTGQPGLCYATSGPGAIHLLNGLYDAKMDHVPVVAIVGQQA
                     RSALGAHYQQEVDLQSLFKDVAADFVAMASVPSQVRHLIDRAVRIASTRRTVTCVILP
                     NDLQELPYEDPPLVHGTTHTGVGYAGPAQLPDDGVLRAAAGVLNAGKKVAILVGAGAL
                     GATDEVIAVAEKLQAGAAKALLGKAVLPDDLPWVTGSIGLLGTKPSWDLMKGCDTFLM
                     IGSAFPYSEFLPSPGKARGVQIDIDGTRVSLRYPMEVSMVGDSAVTLRALLPLLEQKQ
                     ANGWRKEIESGVAAWWKTLEKRALEPASPINPQRVFWELSKRLPENCIMTGDSGSVAN
                     WYARDIRMRRGMMGSLSGSLASLGAATPYAMAAKMAYPNRVVIAFIGDGAMQMNGLNV
                     MITISKYWKQWSDPRLIVMVLNNRDLNQVTWEERIQLGEGKTESTQSIPDFPYHKYAE
                     LLGLKGIFVSDPEKLGLAWEEALTADRPVILECYTDPNVPPLPPHITLKDAKNFMTMT
                     ASEPELGSVLKGSVRQLLASVLPGGKG"
     gene            complement(2397..3389)
                     /locus_tag="VHX39_10535"
     CDS             complement(2397..3389)
                     /locus_tag="VHX39_10535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3991595.1"
                     /translation="MSKIAVITGAGAGVGRATAVEFARNGCDVALLSRDPARLEEAAA
                     ECRGFGVRAVPIPTDVADADAVDAAAERAEKELGPIDVWVNVAMATVFAPVHMLTAAE
                     FQRGTAVTYLGQVHGTMAALKHMRPRNKGSIVCVGSALAYRSVPLQSIYCGAKFAIRG
                     FLDALRSELYHDEIAITLTEVDLPAINTPQFDWARNKMGRKAQPVAPIFQPEVAARAI
                     HFGAFNPRRQIWVGLPTLKAILANRVAPGLLDRYLGKTGYTGQLTDQPSDPDAPGNLF
                     EPVAGSYGAHGRFDDQAKKCSGEMFTSRHRDAAWAAVLVGVAAGACLLFRRRGA"
     gene            complement(3406..3798)
                     /locus_tag="VHX39_10540"
     CDS             complement(3406..3798)
                     /locus_tag="VHX39_10540"
                     /inference="COORDINATES: protein motif:HMM:NF015444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPC domain-containing DNA-binding protein"
                     /protein_id="HEX3991596.1"
                     /translation="MILDRGEEAFACISRFAERENIAAASLTALGAFESAKVGWFDVE
                     ARKYHSIPVKEQCEVLSLIGDIATGDDAKPSLHVHAVLGLSDGTTRGGHLMEGIVRPT
                     LEVTVVETAAHLRRKKRADLGLALIDLS"
     gene            complement(3942..>4605)
                     /locus_tag="VHX39_10545"
     CDS             complement(3942..>4605)
                     /locus_tag="VHX39_10545"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3991597.1"
                     /translation="EIQPGDYTVIQVSDTGTGIDAAALPKVFEPFYTTKPLGQGTGLG
                     LSMIYGFVKQTQGNVLIESTLGKGTCVSLYFRRFHGTLEMKGPRPHHAMPRGEGETVL
                     LVEDDSSVRLLIGEVLRDLGYACIEAIDGQAAVPILSSNVRLDLMITDVGLPGLDGRQ
                     LADFARHHRPDLRILFVTGYAEHVKGGENFLDANMEMVTKPFTLDALAFKIRDMLASP
                     VQ"
BASE COUNT          835 a         1610 c         1316 g          844 t
ORIGIN      
        1 gtgccgatct tcatcttgac ccagcggcaa ccctcggttt ccacccaccc ggcaagctgc
       61 cgcgccaact ggccgtcgtc gtaactggtg aaaccaccgc tgccgtagat cggcacgcat
      121 gtccggtacc gccccagcag cgacgccagc ggctgaccca gcaggacagc cttcaaatcc
      181 catagcgccg tatccaccgc cgagatcgcg gtggccgcca gacccgcccg tcccaggttg
      241 cggacggcga cgttcattgc ccgccacgcc gccggcgggt ccatcgcatc ccgttccgcc
      301 acgaccggcg ccagcttgcc atcgatcagc gccgcgaccg acggatcggc atagctatag
      361 ccgatgccct gccggccggc ggcacccgca tgcaccacga tgatcgtcgt cgagtcccag
      421 gtggccgtcc cgtcagcctc ggggaaatcg gttgggacgg tgtatgcctg agcccgcacc
      481 cagtcgaccg ccgcatccat cggtcagcct ttcccgccag gcagcacgct ggccagcaat
      541 tgcctgacac tgcctttcag cacgctgccc aattccggct cactggccgt catcgtcatg
      601 aagttcttgg cgtccttcag ggtaatatgc ggcggcagcg gcggcacatt gggatcggtg
      661 tagcattcca ggatcaccgg acgatcggcc gtcagcgcct cctcccaggc cagccccagc
      721 ttttccggat cggagacgaa aatgcccttc agccctagca actccgcgta tttatgataa
      781 gggaaatccg ggatgctctg cgtcgactcg gtcttgccct caccgagttg gatgcgttcc
      841 tcccaggtga cctgattcag atcgcggttg ttcagtacca tgacaatcag gcgcggatcg
      901 gaccattgct tccagtattt ggagatcgtg atcatcacgt tcaggccgtt catctgcatg
      961 gcaccgtcgc cgatgaatgc gatgacgaca cggttcgggt aggccatctt cgccgccatg
     1021 gcatagggcg tggcagcacc cagagatgcg aggctgccgg acagcgatcc catcatcccg
     1081 cggcgcatcc ggatgtcacg ggcataccag ttcgccaccg atccggaatc gccggtcatg
     1141 atgcagttct ccggcaagcg cttggacaat tcccagaaca cacgctgcgg attgatcgga
     1201 ctggccggct ccagcgcccg cttctccagc gtcttccacc aggcggcaac gccggattcg
     1261 atctccttcc gccagccgtt cgcctgcttt tgctccagca gcggcaacaa cgcccgcaag
     1321 gtcacggcgc tgtcaccgac catgctgacc tccatcggat agcgcaggct gacccgcgtg
     1381 ccgtcgatgt cgatctggac accccgagcc ttgcccggac tgggcaggaa ctcgctgtat
     1441 ggaaacgccg acccgatcat caggaacgtg tcgcatccct tcatcaggtc ccagctcggc
     1501 ttggtgccca gcaggccgat cgagccggtt acccagggca gatcgtctgg caggacggct
     1561 tttcccagca gcgctttcgc cgcccccgcc tgcagcttct cggcgaccgc gatgacttcg
     1621 tcggtcgcac ccagcgcccc ggcgccaacc aggatcgcga ccttcttgcc ggcattcagc
     1681 acgccagccg ccgcgcgcag gacgccgtca tccggcaact gcgccggtcc ggcatagcca
     1741 acgccggtat gcgtcgtgcc gtggaccagc ggcgggtcct catacggcaa ttcctgcaga
     1801 tcgtttggca ggatgacgca ggtcacggtg cgccgtgtgc tggcgatccg caccgctcgg
     1861 tcgatcagat gccgcacctg ggacgggacg ctggccatcg ccacgaaatc ggcggcgaca
     1921 tccttgaaca gcgattgcag atcgacttcc tgctggtagt gcgcgcccag cgccgaacga
     1981 gcctgctggc caacgatcgc aacgaccggc acgtgatcca tcttggcgtc gtaaagaccg
     2041 ttcagaagat ggatcgcacc cggaccggac gtggcatagc aaagacccgg ttgaccggtg
     2101 aatttcgcat gtcccgacgc catgaacgcg gccatttcct cgtgccggac ctggatatac
     2161 tccatccggt ccttggcttt ctccagcgcg acatccaggc cgcccacccc gtcgccagga
     2221 tagccgtaga cacgcttgag accccattcc cccaggcgat gccaaacaaa ctcgctgaca
     2281 ttcatgctca tggtcggata ctccgcgata caggggggca gtcgttcggt gcggcgttaa
     2341 cggcggatcg gcggcacagt tttgtgaacg tgactaaaat cccggtaacc gggcagctac
     2401 gctccgcgcc gcctgaacag caggcaggcg ccggccgcca cgcccaccag caccgccgcc
     2461 caggcagcgt cgcggtgacg gctggtgaac atctccccac tgcatttttt cgcttggtca
     2521 tcgaaccgac catgcgcgcc gtacgaccct gccacaggct cgaacaaatt gccgggagca
     2581 tccggatccg acggctgatc cgtcagttgc ccagtataac cggtctttcc cagatagcgg
     2641 tcgagcaagc ccggcgcgac acggttcgcc aggatcgcct tcagtgtcgg caaacccacc
     2701 cagatctgcc gccgcggatt gaacgcgccg aagtggatcg cccgagccgc gacttccggc
     2761 tgaaagatcg gtgccaccgg ctgtgctttc cgccccatct tgtttcgcgc ccagtcgaac
     2821 tgcggcgtgt tgatcgccgg caaatcgacc tccgtcagcg ttatcgcgat ctcatcgtga
     2881 taaagttccg atcgcagcgc atccaggaag ccgcggatgg cgaactttgc cccacagtag
     2941 atcgattgca gcggcaccga ccggtacgca agcgccgacc cgacacagac gatcgaacct
     3001 ttgttgcgcg gccgcatatg cttcagcgcc gccatcgttc catgcacctg gccgagatag
     3061 gtcacggccg tcccacgctg gaattccgcc gcggtcagca tgtgaaccgg cgcgaacacc
     3121 gtggccatcg cgacattgac ccagacatcg atcggcccga gttccttttc ggctcgctcc
     3181 gccgccgcgt ccaccgcatc ggcatccgcc acgtcggtcg ggatgggaac cgcgcgcacc
     3241 ccaaatcccc ggcattcggc ggccgcttcc tccagcctgg ctggatcacg tgacagcaac
     3301 gccacgtcac atccattgcg cgcgaattcc accgcggtcg cccgcccgac accggccccg
     3361 gctccggtaa tgactgcgat cttcgacatc tacccctcca ccggctcagg acagatcgat
     3421 gagcgcgaga cccaggtccg cccgtttctt ccgcctgaga tgtgcggccg tttccaccac
     3481 ggtcacttcc agcgtcggcc gcacgatgcc ttccatcaga tggccgcccc gcgttgtccc
     3541 atcgctcaaa ccgagcacgg catgaacgtg caggcttggc ttggcatcgt cgccggtggc
     3601 gatatccccg atgagactca agacctcaca ttgttccttg acgggaatag aatgatactt
     3661 gcgggcctcg acgtcgaacc atcccacctt ggcgctttcg aaggctccca atgcggtcag
     3721 cgacgcggcg gcgatatttt cgcgctccgc gaagcggctg atgcaggcga atgcctcctc
     3781 gccccgatcc agaatcaaga caaacgtccg ctgatccgac tcctgggcga cgcatttgga
     3841 cttcattggt gttttctccg gtcaccacgc cggaacgcgc cggcaggcat ccggtttgcc
     3901 cctcccggcc cgcactgttc gaagatttga agtcgtcccg gctactggac gggggacgcc
     3961 agcatgtccc gtatcttgaa agccagtgcg tccagggtaa atggtttcgt caccatttcc
     4021 atattcgcgt cgagaaaatt ctctccgccc ttcacatgct cggcatagcc ggtgacaaat
     4081 agaatcctga ggtcgggccg gtgatgccgg gcaaaatccg caagctgccg cccgtccagc
     4141 cccggcagcc ccacgtcggt gatcatcagg tcgagccgga cgtttgaact caaaatggga
     4201 accgccgcct gcccgtcgat cgcctcgatg caggcgtagc ccaggtcgcg caacacctcc
     4261 ccaatcagca ggcgaaccga tgagtcatcc tcgaccagca gcacggtttc gccttctccg
     4321 cgcggcatgg cgtgatgcgg gcggggcccc ttcatctcca gcgtgccgtg gaagcgccgg
     4381 aaatacaggc ttacgcaggt gcctttaccc agggtgctct cgatcagcac gtttccctgg
     4441 gtctgcttga cgaagccgta gatcatcgac agccccaggc cggtgccctg gcccaggggc
     4501 ttggtggtgt agaacggttc gaagactttc ggcagcgctg cggcatcgat gcccgttccg
     4561 gtgtcgctga cctggatcac cgtatagtcg ccgggctgga tctcg
//
LOCUS       DATAVD010000570         2757 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_611978, whole genome shotgun sequence.
ACCESSION   DATAVD010000570 DATAVD010000000
VERSION     DATAVD010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2757
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_611978"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..189)
                     /locus_tag="VHX39_10550"
     CDS             complement(<1..189)
                     /locus_tag="VHX39_10550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991598.1"
                     /translation="MGPSTPTVLADVVAVRASQARAIARPVKGQPRSGEFEVNAEDCM
                     KLWRKRVSEQCRNQQPEVA"
     gene            241..1278
                     /locus_tag="VHX39_10555"
     CDS             241..1278
                     /locus_tag="VHX39_10555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006560476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEX3991599.1"
                     /translation="MTQYKRIAIDTSKSVFTIHCIDARDRPVLRTNLRRGQVLPFFKK
                     LPATEIAIESCSGSHHWARELTALGHTPRLVPPQYVKPYVKRGKNDRNDAEAICEAAG
                     RPGMHFVPVKSLTQQAQGMVLKVRDTLIGQRTALGNTIRGHAAEFGIVTGKGIGTIAP
                     LLSAIEQEAAVPPEAKEMFALLGRQIEELGARIKEIDAKLNAAHKASAVSTRLATIPG
                     VGPVIALTLATEIDPAAFESGRHLAAWVGLTPKEHSTGGKQRMGGISRAGNERLRALL
                     VSGATSVINAAMKPGSRQMTEWLRALLLRKPRKLAAVALANKIARTAWAMMTSGETYR
                     RRPARPGALAA"
     gene            1333..1644
                     /locus_tag="VHX39_10560"
     CDS             1333..1644
                     /locus_tag="VHX39_10560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991600.1"
                     /translation="MPRPSVNEEPMTGAERQARYRAAHAAGAPVVRTRRPTDRRSRIQ
                     RWNDTIAAAVELQAEYAGWLDALPGNQQDSALADALRAIVELDLSELQAVEPPRGFGR
                     D"
     gene            1988..2164
                     /locus_tag="VHX39_10565"
                     /pseudo
     CDS             1988..2164
                     /locus_tag="VHX39_10565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611431.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
     gene            complement(2087..2578)
                     /locus_tag="VHX39_10570"
     CDS             complement(2087..2578)
                     /locus_tag="VHX39_10570"
                     /inference="COORDINATES: protein motif:HMM:NF021155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-F CRISPR-associated protein Cas7f/Csy3"
                     /protein_id="HEX3991601.1"
                     /translation="MFIDYRKGSDVVHKIGTALAGTSDLLAMDIAIRVRSYKGAEVWP
                     SQEFVEETQKKRNGREISRVLAARESRADGIPVRYGYMHSQKIGNAIRTIDEWHGNAV
                     FGAIPVGLPHKWGSGGHLHEWVWIVGCLEFLSKVGAKRAVINRAANLQQKVSTPSRPA
                     HLL"
BASE COUNT          543 a          879 c          832 g          503 t
ORIGIN      
        1 cgccacctca ggctgctgat tccggcattg ctccgacacg cgtttgcgcc agagtttcat
       61 gcagtcctcg gcattcactt cgaactcacc gctgcgaggc tgccccttga ccggccgagc
      121 gatcgcccgt gcctgtgaag ctcggaccgc tacgacgtcc gccaggactg ttggggtgga
      181 cggccccacg gcatcaagtg ccagaattgg ggctgtgagc aaccaaaacc ggagccgtcc
      241 gtgacccaat ataagcgcat cgccatcgac acgtccaaat ccgtcttcac gatccattgt
      301 atcgatgctc gggatcggcc ggtcttgcgg accaatcttc gccgcgggca agtgctcccg
      361 ttcttcaaaa agcttcccgc cactgagatc gccatcgaat cctgtagcgg ttcacaccat
      421 tgggcgcgcg aactgaccgc gctcggtcac acgccacgtc tcgtcccgcc gcaatatgtc
      481 aaaccctacg tcaaacgcgg caagaacgac cgcaatgacg ccgaggcgat ttgcgaggcc
      541 gccggccgtc ccggcatgca tttcgtgccg gtgaaatccc tcacgcagca agcgcagggc
      601 atggttttga aggtgcgcga caccctgatc ggtcaacgca ccgctttggg caacacgata
      661 cgtggtcatg ccgctgaatt cggcatcgtc accggcaaag gcatcggcac gatcgccccg
      721 ttgctatctg ctattgaaca ggaagccgcc gttccgccgg aggccaaaga gatgtttgcc
      781 ctgctgggtc gacagatcga agagctcggc gcccggatca aagaaatcga tgccaaactg
      841 aatgccgcgc acaaagccag cgcggtcagt acacgtctcg cgaccatacc tggagtcggt
      901 ccggtcatcg cattgacgct ggcgactgag atcgatccgg cggcgttcga atcaggccgc
      961 catctcgccg cctgggttgg tttgacacca aaggaacatt ccaccggcgg gaagcaacgc
     1021 atgggcggca tcagccgggc tggcaatgaa cgcctgcgcg cgttgctcgt ctctggcgcc
     1081 acctcggtca tcaacgccgc gatgaagccg ggcagccggc agatgacgga gtggttgcga
     1141 gctttgctgc tccgcaagcc gcgcaaactc gcagccgtcg cactcgccaa caaaatcgcc
     1201 cgcacggcct gggcgatgat gacaagcggt gagacgtacc ggcgccggcc cgccaggccc
     1261 ggggcgttgg cggcatgacc gctttgatcc gtctcgcggc tcaaacgtca cgtaacgatt
     1321 gggagtggaa ccatgccccg tccgtcggtc aatgaagagc ccatgaccgg cgccgaacgc
     1381 caggcacgct atcgtgccgc acatgcggct ggcgcaccgg ttgttcgcac acgtcgtccc
     1441 accgaccggc gttccaggat ccagcggtgg aacgatacca tcgccgcggc cgtggagtta
     1501 caggctgagt atgccggctg gttggacgcg ttgccgggca atcaacagga cagtgcgctc
     1561 gccgatgcct tgcgggcgat tgtcgaactc gatctctccg aactccaggc ggtcgagccg
     1621 ccacggggct tcggtcgtga ttgagcaacc agagggccca ggcggcatgg gtcacgatga
     1681 cgcgcgtggt gtttgcctcg cctcggcggg ggaaccccac gagcgtgcgt tggtgccggg
     1741 gtgaaagagc taaatgagat gacgatcggt cgaaccgacg atccagagaa cccggtaagt
     1801 gtcccggctt tcgaagccgc cggactgttt gggactggat cgcgaacccc atctgggcca
     1861 gcggtcatgt tgccgcgtca acaggccgaa cacatgatcg cagtcgaccc gcccgtcaga
     1921 attctcacag cagctgttga atccgagggg ccgtccacac aggacactga gcggacagaa
     1981 tgactggttg gtcaattatg ccgagcggta ccgcgccggg ctgagggtcg ggaccgcgct
     2041 caccgaaggg acggccaatt tcctggtgaa ccgtcggatg aataaatcac agcagatgcg
     2101 ctggtcgcga cggggtgctg accttctgct gcaggttcgc tgcgcggttt ataacggcac
     2161 gcttggcacc gactttggac agaaattcca agcagccaac gatccaaacc cactcatgaa
     2221 gatggccgcc tgacccccac ttgtgcggca gtcccaccgg aatggcacca aagacggcat
     2281 tgccgtgcca ctcatcgatc gtccggatcg cattgccaat tttctgcgag tgcatgtagc
     2341 catagcggac ggggatgccg tcggcacgtg actcgcgggc ggccagcaca cgggagattt
     2401 cccgtccgtt gcgcttcttt tgcgtctctt cgacaaactc ctgcgatggc cagacctccg
     2461 cacccttgta cgagcggacg cggatggcga tatccatcgc gagtagatcc gatgtgccgg
     2521 ccaaggctgt tccgatcttg tggacgacgt ctgaaccttt ccggtagtcg atgaacaggc
     2581 cgccttgatc gcgtcgagac ctgggaaccg ctcccgcttg cgcaaccgac cggtctcagt
     2641 cactcgcagc atcttcgccc tgatggatga ccgcgatcgc acttactttg gacagcaggc
     2701 cggtgacgat caggacagta tcggctttat ccacgcttca acccggtcga tcttcgg
//
LOCUS       DATAVD010000571         2394 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_425651, whole genome shotgun sequence.
ACCESSION   DATAVD010000571 DATAVD010000000
VERSION     DATAVD010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2394
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425651"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VHX39_10575"
     CDS             <1..216
                     /locus_tag="VHX39_10575"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEX3991602.1"
                     /translation="DPDFRAFRVHDLRHAFAIRWLREGGDIYNLSLHLGHTSLKTTEI
                     YLGHLSAREQAVSKYRMAQSGAQRSVA"
     gene            complement(284..373)
                     /locus_tag="VHX39_10580"
     tRNA            complement(284..373)
                     /locus_tag="VHX39_10580"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(337..339),aa:Ser,seq:tga)
     gene            complement(883..1953)
                     /locus_tag="VHX39_10585"
     CDS             complement(883..1953)
                     /locus_tag="VHX39_10585"
                     /inference="COORDINATES: protein motif:HMM:NF007504.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate/lactate/ureidoglycolate dehydrogenase"
                     /protein_id="HEX3991603.1"
                     /translation="MLTFQPGALRAVTQLIARRMGSDQAEAAEVADHLVRANLAGHDS
                     HGVGMLPTYVRLLGDGLLVPNQTPETVLDAGALLVIDARRGYGQRMTADAVRRAIGRA
                     KELGACVLALRNSAHVGRIGTYAELATSHGCAFTAFVNVADHRDIAATFGATEPRLGT
                     NPFCTAVPGPDGQPMLLDMATTAIAAGKARVAYNKGVPVPDDSLIDETGAATNDPAGF
                     IRDHTGALKTFGLHKGSGLAVMCEIMATAVAGGQGAHDPAQGGVLNSMLAIVIDLAKI
                     GDLSAVTASVGATRAHVKSARAAPGVSEVLTPGEPERLSAARRNAAGIEVDETSWADI
                     RAAALTLGITEAEFDQASRANA"
     gene            complement(1990..>2394)
                     /locus_tag="VHX39_10590"
     CDS             complement(1990..>2394)
                     /locus_tag="VHX39_10590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014189700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase C-terminal
                     domain-containing protein"
                     /protein_id="HEX3991604.1"
                     /translation="NGQPLIPAMGAERRRALKVCALATGLADKAVSLLYERILRKEVS
                     QVWVERCHAQITDVFAELEADRDARHSAWWFGDHIGHADIAVTCAIRFTREAHGDLFD
                     PHRWPALQGHFEKCESLAAFRDTVQVLKPPTT"
BASE COUNT          445 a          776 c          740 g          433 t
ORIGIN      
        1 gatccagact ttcgggcctt ccgggttcac gatcttcggc atgcctttgc gatacggtgg
       61 cttcgggagg gaggcgacat ctacaatctg tcactgcatc tggggcacac ctctctgaag
      121 actaccgaaa tctacctcgg gcacctctca gcccgggaac aggcggtatc aaagtatagg
      181 atggcacaat cgggggcaca gcgctccgtt gcctgactta actcgttctg ctatggtatg
      241 gttatcgact gcacctaagt ttttgaaaga aaaagagaaa ttctggcgga tggggtggga
      301 ttcgaaccca cggtacgctt gcacgtacgg cggttttcaa gaccgctgcc ttcaaccact
      361 cggccaccca tcccgcgagc gcgccgcgag atctccgcgc cacaccgtga cacttacccg
      421 gcgcgcttgc ttgccgtggc atggcccgcg cgtcttacct gcgccagtcg gagacaagca
      481 gacttagacg gacaccgcct ggaattgaac tccggcggta taagcctttg caagcggggc
      541 gccaagcgtt gccgctgcct ggccgcatgt gcgccttgta ttttgcctga aacgaaccgc
      601 gtcgcgacaa tgctcggact accggtgtca gttcgtccgc cagcattgcc catggcgtgt
      661 tctcatctcg cgacaattat caccgccgcc gccgacccga tctgaaccgc agcgtcacct
      721 ttcaactgga gaacgaccca tcccaacccg aaacagacgt atcgccttcg gtcacaaccg
      781 atgccggaac atttcggatc tatgaccatg ccctgcaatc ggatatcggc gccccgtgcg
      841 cgggccgacg tagacgggca ggcggtcgcc tcgaagtccc cactacgcgt tggcgcggga
      901 agcctgatcg aactcggcct cagtgatgcc gagcgtcaat gcagcggcgc gaatgtccgc
      961 ccatgacgtt tcgtcgacct caatcccggc agcattcctt cgggcagcgg acaggcgttc
     1021 gggttcaccc ggcgtcaaca cctcggacac gcccggtgca gcacgggctg atttcacatg
     1081 cgcacgtgtg gccccgaccg aggcggtgac ggcagacagg tcgccaatct tcgccaggtc
     1141 gataacgatc gccagcatgg aattcagcac cccgccctga gccggatcgt gcgcgccctg
     1201 accgccggca accgcagtgg ccatgatctc gcacatcaca gcaaggccgg agcctttgtg
     1261 cagaccaaac gtcttgagcg cgcctgtgtg gtctcggatg aacccggcgg gatcgttcgt
     1321 ggcagcgcca gtctcgtcga tcaggctgtc gtcaggcacc gggacgccct tgttgtacgc
     1381 gacccgcgct ttgcccgcgg caatggcagt ggtcgccatg tccagcagca tgggttggcc
     1441 gtcaggccca gggacggctg tgcaaaatgg gttcgtgcca aggcgcggct cggttgctcc
     1501 gaaggttgcg gcgatgtcgc gatggtcggc gacattaacg aaagcggtga acgcacagcc
     1561 gtggctcgtg gccagttcag cataggtgcc gatgcggccg acatgggcgg agttgcgcag
     1621 tgccagcacg caggcgccaa gctccttggc acgcccgatg gcacggcgga cagcgtcggc
     1681 ggtcatgcgc tgcccgtacc ctcggcgtgc gtcgatcacc aacagcgcac cggcatcgag
     1741 cacggtctcc ggcgtctggt tcggcaccag caggccgtcg cccagaagcc gcacataggt
     1801 cggcagcatg ccgacgccat gcgaatcatg gccggcgaga ttggcgcgca ccagatgatc
     1861 ggcgacttcg gcggcctcgg cctgatcgct gcccatccgg cgggcgatca gttgggtgac
     1921 ggcgcgcaac gcgcccggct gaaaggtaag catcgggcgc gtttagcggg ggatcgccgg
     1981 attggccagt caggtggtcg gtggtttcag cacctgcacg gtatcgcgga acgccgccag
     2041 cgactcgcat ttctcgaaat gcccttgcaa tgccggccat cggtgaggat caaatagatc
     2101 accgtgtgcc tcccgcgtga agcggatggc acaggtcacc gcaatgtcgg catggccgat
     2161 gtgatcgccg aaccaccacg cggaatgtcg ggcatcgcgg tcggcttcca gttccgcgaa
     2221 cacatcggtg atctgcgcat gacagcgctc gacccaaacc tgcgacactt ccttgcggag
     2281 gatccgctcg tacagcaggc tcaccgcctt gtccgccaga ccggtggcca gcgcacaaac
     2341 tttcagcgct cgcctgcgct cggcacccat ggcggggatc agaggctggc cgtt
//
LOCUS       DATAVD010000572         1571 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1543750, whole genome shotgun sequence.
ACCESSION   DATAVD010000572 DATAVD010000000
VERSION     DATAVD010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1543750"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..281)
                     /locus_tag="VHX39_10595"
     CDS             complement(<1..281)
                     /locus_tag="VHX39_10595"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX3991605.1"
                     /translation="MPLESIETAELSLSDMRWQARVDLAAAHRLAVMHGFNEGIFNHF
                     TLRVPGTGDRYYQIPFGLHWSEVTASCFMEVGYDGTLLAGEGEIERSAF"
     gene            complement(348..539)
                     /locus_tag="VHX39_10600"
     CDS             complement(348..539)
                     /locus_tag="VHX39_10600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991606.1"
                     /translation="MSQNRTPIKTGRASLIGGTAVAVASCILWALITHRLGIDTPAVL
                     FCGLLVSAAVGLWIRVADL"
     gene            complement(536..1318)
                     /locus_tag="VHX39_10605"
     CDS             complement(536..1318)
                     /locus_tag="VHX39_10605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HEX3991607.1"
                     /translation="MSQTRLSQRQAAFRADFRTRIASAYYGWVHVAMIAVLGLSAIWY
                     CARQVQAPAWYEFLVIPFAFGVSNVFEWWIHRYIMHRPVKGFMGIYKRHTLAHHQFFT
                     DVEPTFDNSRDFRIVFFPPYALVAFMALSLPPAAVLGLVGLPNAGWMLLITNIALYLN
                     YELFHFCCHVKNDRLVQYIPLINSIRRHHIAHHNTAIMMERNFNLTYPVADWFFGTSD
                     LACGLLKHVFNGYDTSQVRRDLKRVRNTTDDVRAGHVSVAAQ"
     gene            complement(1386..>1571)
                     /locus_tag="VHX39_10610"
     CDS             complement(1386..>1571)
                     /locus_tag="VHX39_10610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991608.1"
                     /translation="KEKDTNEIYTINFKIYQQHHLQTQPIAGTHILADMRLHVGRPVH
                     CQHGPLPCNPMPEAWRP"
BASE COUNT          350 a          443 c          490 g          288 t
ORIGIN      
        1 cagaacgcgg accgctcgat ctcgccctcg cccgcgagta aggtgccgtc atagccgact
       61 tccatgaagc agctcgcggt gacttcggac cagtgcaggc cgaacgggat ttgatagtaa
      121 cggtcgccgg tgcctggcac ccgcaaggtg aaatgattga aaatcccctc gttgaagcca
      181 tgcatgacgg caaggcgatg ggcggcagcg aggtccaccc gtgcctgcca gcgcatatcg
      241 gacaggctga gttcggcggt ttcgatcgat tccaacggca tggtaagcgg ctccttctcg
      301 gcacgatgca agatgatccg ccctggcatg ataccggtca acaggggcta gagatcggct
      361 acccggatcc acaacccgac cgctgccgac acgagcagtc cgcagaacag caccgccggc
      421 gtatcgatac caagccgatg ggtaatcagc gcccaaagga tgcagctggc gacagcgacg
      481 gccgtcccgc cgatcaggct ggcccgtccg gttttgattg gggtgcgatt ctggctcact
      541 gggcggccac cgaaacatga ccggcacgca cgtcatcggt ggtgttgcgc acccgcttca
      601 gatcgcgccg gacctgcgac gtatcatagc cgttgaacac gtgcttcagc aggccacagg
      661 cgagatcgga ggtgccgaag aaccaatcgg caaccggata ggtaaggtta aagttccgct
      721 ccatcatgat cgccgtgttg tgatgcgcga tgtgatgccg ccggatcgaa ttgatcagcg
      781 gaatatattg caccagccga tcattcttta catgacagca gaaatggaac agctcgtaat
      841 tcaggtacag cgcgatgttg gtgatcagca gcatccatcc ggcattcggc agtccaacga
      901 gccccagaac ggcggcagga ggcaaagaca gcgccatgaa cgcgaccagc gcgtacggcg
      961 gaaagaacac gatgcggaaa tcgcgcgaat tgtcgaacgt gggctcgacg tcggtgaaga
     1021 actggtggtg cgccagagtg tggcgcttgt agatccccat gaagcctttc accggccgat
     1081 gcatgatgta ccggtggatc caccactcga acacgttgga aacaccaaac gcgaatggga
     1141 tgaccaggaa ttcgtaccag gcgggcgcct gcacctgccg cgcacaatac cagattgccg
     1201 acaggccaag cacggcaatc attgcgacat gcacccaacc gtaataggcg gacgcgatcc
     1261 gggtgcggaa atcggcacga aatgcggcct ggcgttgcga caggcgggtc tggctcatcg
     1321 gggtgtcctc cggtccctga agatacgccc tccgggccgc gcgggcaaag gtcttgacag
     1381 cagcttcatg ggcgccaggc ttccggcatc gggttgcaag ggagcggacc atgctgacag
     1441 tggacaggcc ggccgacatg aaggcgcata tcggcgagga tatgggtgcc agcgattggc
     1501 tgagtttgta gatggtgttg ttggtaaatt ttgaagttga ttgtgtagat ctcgtttgta
     1561 tccttttctt t
//
LOCUS       DATAVD010000573         1943 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_55185, whole genome shotgun sequence.
ACCESSION   DATAVD010000573 DATAVD010000000
VERSION     DATAVD010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55185"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1253
                     /locus_tag="VHX39_10615"
     CDS             <1..1253
                     /locus_tag="VHX39_10615"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3991609.1"
                     /translation="GRFVDGFGKTMVMIVCRRTLYKQFDRFLLVAIGFYAVLAYSTRN
                     GTPLLQAELLEWLSWRWMYWFYVPIALVGMVLVGRYFRPDRPPQPMRLPIDWLAVTMF
                     TAWVVAIVFAFSWYRKWGGWTSNAFAATVILCIALPVFLVIWLGSGYSPDEHLKRLLR
                     TRVVVLATTVRGLMLTQMAGVLTIVGMYATELRDYPRTTAGWLMVPAVLTMAATTFLT
                     VWFHSRRLRHVWLIVGMLGTAASVWWMSSLDNCTSKEHLALMLACWGAFLGMIPPAFL
                     TDEVEGVSPADALYAGSLAIVGLVVPLLTVPTATGTVIKAATDQALDTYRLNLSADRP
                     AVREAAVRVADYYHQRGQSGPQLEQETAAVLGGFATVESIAFGFRFGLRFFSLMMLTL
                     GVAAALLLWQAARGLRAPPGAGYH"
     gene            complement(1381..1590)
                     /locus_tag="VHX39_10620"
     CDS             complement(1381..1590)
                     /locus_tag="VHX39_10620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991610.1"
                     /translation="MGVLAIAPGPGRFASGGQKQNTKQTSAKALAEVAVIAHGDPPMM
                     ADAARSDGEFAEALAERSAKQVGRI"
     gene            1705..>1943
                     /locus_tag="VHX39_10625"
     CDS             1705..>1943
                     /locus_tag="VHX39_10625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991611.1"
                     /translation="MKLASVVQEQVGQRPTLSAPPSTQDGSAHSAEQEEVPAGIIESE
                     PVADQLDLPSAVALSYRLQPRLRVYMESIAQARANS"
BASE COUNT          315 a          606 c          605 g          417 t
ORIGIN      
        1 tgggtcggtt cgtcgatggc tttggcaaga cgatggtgat gatcgtctgc cggcgcacgc
       61 tttacaagca gtttgaccgc tttcttcttg tggcaattgg cttctatgca gtccttgcct
      121 actcgacgcg caacggcact ccgctgcttc aggccgagct gcttgagtgg ctgtcgtggc
      181 gctggatgta ctggttctac gtcccgatcg cgctagtggg gatggtgctt gtcggacgat
      241 attttcggcc cgaccgccca cctcagccca tgcgccttcc gatcgactgg ctggccgtca
      301 cgatgttcac ggcttgggtg gtcgcgatcg tgtttgcctt tagttggtac cgcaaatggg
      361 gcggttggac gtcgaacgcg ttcgcagcga cggtaatcct ctgcatcgct ctgcccgtat
      421 tccttgtgat ctggctcggg tcaggctaca gccccgacga gcatctgaag cggctgctgc
      481 ggacccgcgt ggtcgtcctc gccacgactg ttcgcgggtt gatgctcacg cagatggcgg
      541 gcgtactaac gatcgtgggc atgtacgcaa ccgagctgcg cgactatccc cgcaccacgg
      601 ccggctggct catggtgcca gccgtgctga caatggctgc caccacgttc ttgacagttt
      661 ggtttcacag tcggcggctg cggcacgtgt ggttgattgt gggaatgttg gggacagcgg
      721 ccagcgtgtg gtggatgtcg tcgctcgaca actgcacgtc gaaggagcat cttgccctaa
      781 tgctggcatg ttggggggca ttcctcggca tgatcccgcc cgcgttcctg accgacgaag
      841 ttgaaggagt gagcccggcg gacgcccttt atgccggctc cctggcgatc gtcggccttg
      901 tcgtgccgct cctcaccgtc ccgacggcaa ccggaacagt gatcaaggcc gcgaccgacc
      961 aggctctcga cacctaccgc ctcaatctta gcgcagaccg tcccgcggtg cgcgaagccg
     1021 cggtccgcgt cgccgactac tatcatcagc gcggccagag cgggccgcag ttggaacagg
     1081 aaactgccgc tgtgctgggt gggttcgcca ccgttgagag cattgccttc gggttccgct
     1141 tcggcctgag atttttcagc ctgatgatgc tgactcttgg tgtggcggcg gcgttgctgc
     1201 tgtggcaggc cgcccgagga ttgcgcgcac cgcctggagc tggataccac tgacacgcgc
     1261 tgatgctccc aatatttgta ttttaggtgc cttgcgggta ttaccgataa taccgatggc
     1321 ctcacacatt cataccgcga ttgcgccagc tgttcgccgg catgcgcgct tgtgcaatcg
     1381 tcaaatccta ccaacctgtt ttgctgatcg ctcggcgagc gcctctgcaa attctccatc
     1441 ggatctggcc gcgtcggcca tcatcggagg gtcaccgtgc gcgatcaccg cgacttccgc
     1501 gagcgccttc gcgcttgttt gcttggtgtt ctgcttctgg ccaccggatg caaaacggcc
     1561 gggccccggg gcgatagcca ggacgcccat cgaagcagtc cgcccgcaga aagcgccaca
     1621 cgggtgaccg ctcaacaatc gctccccgcg ggcgctgtgt cgctcgcgcc agctacgata
     1681 gcgccagcgt cagatcggtc gcccgtgaaa cttgcctcgg tcgtccagga gcaggttggg
     1741 caaaggccga cactatccgc accgccaagc actcaggacg gaagtgcgca ctcggccgaa
     1801 caagaagaag ttcccgcggg gatcatcgaa tctgagccgg tcgcggacca gcttgatttg
     1861 ccgagcgcgg tcgcgctatc gtaccgattg cagccgcggc tgcgcgtgta catggaaagc
     1921 atcgcgcagg cccgtgccaa ttc
//
LOCUS       DATAVD010000574         6786 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3030906, whole genome shotgun sequence.
ACCESSION   DATAVD010000574 DATAVD010000000
VERSION     DATAVD010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6786
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3030906"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..1087
                     /locus_tag="VHX39_10630"
     CDS             113..1087
                     /locus_tag="VHX39_10630"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003960 - NADPH:quinone reductase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone oxidoreductase family protein"
                     /protein_id="HEX3991612.1"
                     /translation="MKAMVCEAFGGPEVLAWRDLPDPPAPGPGEIQVQIRARGVQYVD
                     VLMLAGKYQFRPEPPFIPGGEAAGEVVAIGPDVTAFKPGDRVMSRHTLGALAELGNAR
                     AALCDLVPDGMSLESAGVFRGAYSTAYHALLQRGRLKPGEWVLVHGAAGGIGIAAIQV
                     AKLFGAKVIATASGEAKHQACLAEGADFAIEYHGGFVDRVKELTGGQGVDIIYDPIGA
                     NVGEDSLRCLAWCGRLLILGFLGGGPTNIRSNYLLIKGIDAVGVRIGGLNEANPALAI
                     ANMNELTKLAAEGKLKPRISHRFRLDQAKEALQAVIDRAVIGKAVLVS"
     gene            1130..1402
                     /locus_tag="VHX39_10635"
     CDS             1130..1402
                     /locus_tag="VHX39_10635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991613.1"
                     /translation="MFETELARDGYEIVSVSMQPDAVNPQHVHPFDARVMVVDGAMTV
                     DREDTGARTFQVGEWFELHAGCRHSEAAGASGATYVAGRRLPANRR"
     gene            1417..1686
                     /locus_tag="VHX39_10640"
     CDS             1417..1686
                     /locus_tag="VHX39_10640"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3991614.1"
                     /translation="MNQSEFEADLKREGYEVFYGGMQAGHANSDHTHPWQARVMVIGG
                     TITITRNGKTETFGVGDSCAVSAGELHAEQVGELGVAYIAGRRAV"
     gene            1845..2261
                     /locus_tag="VHX39_10645"
     CDS             1845..2261
                     /locus_tag="VHX39_10645"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon domain-containing OB-fold protein"
                     /protein_id="HEX3991615.1"
                     /translation="MPEPGRALPAPTPETQGFWDGTNAGELWLQRCDACGKNYFPPRP
                     FCPGCASRKVSWFKASGRAVLWSYVIHHRPVPGFKPPYAIAVVQLAEGPRMMSNIVEC
                     EQTPEALQLDMELEVVFEKQNDTITLPLFRPVPAKG"
     gene            2266..3408
                     /locus_tag="VHX39_10650"
     CDS             2266..3408
                     /locus_tag="VHX39_10650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase"
                     /protein_id="HEX3991616.1"
                     /translation="MRRNAVTVVGAAETTNLGVIPDVSQIQLHADAALNAMADCGLRP
                     KDIDGIATAGETPVQLAHYLGITPTWVDGTSVGGCSFMIHVRHAAAAIEAGLAKTILI
                     THGESGRSRVGVAGRSVAASSLNGQFEQPFGPMGPPSMFTIPVLRYMKTYGVTEEQIA
                     KVCVVQREWAGKNPRATFKTPITTDDVLNSRMIAYPFRLLMCCLVTDGGGALILTSAE
                     RAKDFKTKPVYILGTGESVETPMVSQMEDFTSSRAFRVAGPTAFQQAGINVNDVDHLM
                     IYDAFAHLPIYGLEDLGFLPRGEAAAFIAARNTAPGGALPLNTNGGGLSYMHSGMYGM
                     YALQESVRQMRGIAPAQVPDAKISVCHGVGGMFAASGTIIFTNQEP"
     gene            3500..4696
                     /locus_tag="VHX39_10655"
     CDS             3500..4696
                     /locus_tag="VHX39_10655"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3991617.1"
                     /translation="MTESLFTGLKVIDCASWIAGPAAATIMSDFGADVIKIEPPGVGD
                     PWRARGPIPGKDVDYYWQLTARNKRSLAIDLKHPDGIAALHRLVASADVFVTNFPLPV
                     RDRLQLSPVHLLPLNPRLIYASFTAYGEAGEEAAKTGFDSTAYWARTGLMDQVRAEAT
                     TSPARSMPGMGDHPSATGLYAAIVTALYRREKTGQGGVVKSSLLQNGLWANGCAVQTR
                     LFGEHVSHRPTREEAPNALANHYQTRDGRWFIMAMWNEQRQLRAFLSALGREDLTDDP
                     RFATPDARKQNAAELVIVLDAEFAKRDLDDWRAILDSVGITFGIVGTVNEVLDDQQMR
                     DSGALVPFADGEHLTVSSPFHIDGVEKVPAQRAPDLGQHSEVVLREAGYGADAIARLR
                     SLGVLA"
     gene            4720..5055
                     /locus_tag="VHX39_10660"
     CDS             4720..5055
                     /locus_tag="VHX39_10660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991618.1"
                     /translation="MAAVALGVAVALPYLRPEAPRRLLFGVIHGMTGALGLGLLIIAL
                     QGPRRGDAMGAGSFGIVAALLFGSAVMIGPVIRVLGKRKPSVVGLVVVTHASLAITGF
                     VLFLAWASL"
     gene            complement(5095..6138)
                     /locus_tag="VHX39_10665"
     CDS             complement(5095..6138)
                     /locus_tag="VHX39_10665"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991619.1"
                     /translation="MAKSNYYAGVAGYVGRADQVGRVGVFSRAAGAESWTQPISEHET
                     YAVHVHPTDPNVVFAGTKDGVYRSTDKGKTFQRANFPGARQIWSFLVDSENPKLVYAG
                     GSPISVYRSEDTGETWKEMPDPGMPDRAVMPFACRVMRMAQHPNKRGTIYAALEVNGV
                     MRTDNFGESWTDRSADLLRLAEKPNLKSKIVSNTYNEGMLDGHAIAINPADPDGVIFA
                     ARMGLFQTHDGGETWQDMEVGRFSPTTYGRDIKVGADGKTLYAALSVAASSKDGAVYQ
                     STDKGQTWSRYDRVQVHGTIMSVAPHAKNSNVMAIGARYEGEIYATEDGGATWDSLPL
                     PAGVKDIYSLAVS"
     gene            6250..>6786
                     /locus_tag="VHX39_10670"
     CDS             6250..>6786
                     /locus_tag="VHX39_10670"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEX3991620.1"
                     /translation="MPNVTAERLTEIEIGLLIAAGASAEEAEIIARYNVGANLVGHDS
                     HGIILIPQYIDRIKAGHIVPGAPWEIQQETATTTVIDGNWGFGYVVNDRAMRYTIEKA
                     KKQNVAVATVRRQSHIGRLASYPLLASAEGMIAMITADSGRSSKAVAPYGGAKARLGT
                     NPICFAIPSNLDGPLVFDM"
BASE COUNT         1242 a         2016 c         2165 g         1363 t
ORIGIN      
        1 caactttgcc atgatttaat cagcggtgcc gtggccgcgg ccgcctatac taccctcgtt
       61 accatgagcc ggttagcctg ccgatcagct cactggggcg cggagggcga cgatgaaagc
      121 aatggtttgt gaagcgtttg gtggtccgga ggtgctggcc tggcgggatc tccccgatcc
      181 accggctcct gggccgggcg aaatccaggt tcaaattcgg gctcgcggcg tccagtatgt
      241 cgacgttctg atgttggccg gtaaatacca gtttcgcccg gagccgccgt tcatccccgg
      301 cggcgaggca gcaggcgaag tcgttgccat tggcccggat gtcacggcat tcaaacccgg
      361 cgaccgcgta atgtcccggc ataccctggg tgcccttgcc gagctcggca acgctcgcgc
      421 tgcgttatgc gatctcgttc ccgacggcat gagcctcgag tcggcaggcg tgttccgcgg
      481 cgcttattcc acagcgtacc acgcccttct gcaacgcggc cggctgaagc ctggcgaatg
      541 ggtgctggta catggcgccg ccggagggat cggcatcgca gccatccagg tcgccaagct
      601 gttcggtgcc aaagtgatcg cgacagccag cggggaggcg aagcatcagg cctgcctggc
      661 agagggtgcc gatttcgcca tcgaatatca tggcggtttc gtcgatcgcg tgaaggagtt
      721 gaccggcggc caaggggtcg acatcatcta cgacccgatc ggcgccaatg ttggcgagga
      781 ttcactacgc tgtctggcgt ggtgcgggcg gctgctgatc cttggcttcc tcggcggcgg
      841 gccaaccaac attcgcagca actacctgtt gatcaagggc atcgatgcgg tcggcgtgcg
      901 gattggtggg ttgaatgagg caaatccggc acttgcgatc gccaacatga acgagctgac
      961 gaagctggcc gccgagggca agttgaagcc gcgcatttcg caccggttcc ggcttgacca
     1021 ggcgaaggag gccttgcagg ccgtgatcga ccgcgcggtc attggcaagg cggtgctggt
     1081 cagttagctt tgccgtgact tcgcggaggg gagtgtcatg gatcgtggaa tgtttgagac
     1141 cgaattggct cgggatggat atgagatcgt ctcggtttcg atgcagccgg acgcggtgaa
     1201 cccgcagcac gtgcatccgt tcgacgcccg cgtgatggtt gttgatggtg caatgactgt
     1261 cgaccgggag gacaccggcg cgcgcacctt ccaggttggc gaatggttcg agttgcatgc
     1321 ggggtgccgc cattccgaag ctgccggggc ctctggagca acctatgtcg ccggccgccg
     1381 cctgccggcc aaccgccgat aatcggaggg agtaagatga atcagagcga gttcgaagcc
     1441 gacctgaagc gggaaggcta tgaggtgttt tatggcggga tgcaggcagg tcatgccaac
     1501 tccgaccaca cgcacccctg gcaggcacgt gtcatggtga tcggcggtac gatcacaatc
     1561 acgcgcaacg gcaaaaccga aacgtttggt gttggggaca gttgcgccgt ctcggcgggc
     1621 gaactgcatg ccgagcaggt tggcgagctg ggtgtcgcat atatcgccgg acgccgcgcc
     1681 gtctgacgtc gaccggtttg tgctccacgc cggtttcagc caattccatc atgctgaggc
     1741 ctgcgatttc gccatgttct ggcccgatat tttgggcctg gtaagatggc ctgagcacgg
     1801 cggactaatt ccaacacatg ccttaatttt gggggaaacg acaaatgcct gaaccaggac
     1861 gcgccttgcc cgcgccgaca cccgaaacgc aagggttttg ggatggcacc aacgccggcg
     1921 aattgtggct gcaacgttgt gatgcctgcg gcaagaatta cttcccgccg cggccattct
     1981 gcccgggttg tgcgtccaga aaagtcagtt ggttcaaggc gtcgggcagg gcggtgctgt
     2041 ggagctatgt gatccatcat cgtccggtgc ccgggttcaa gccgccttat gcgatcgcgg
     2101 tcgtgcagct cgccgaaggg ccgcgcatga tgagcaacat cgtcgaatgc gaacaaacgc
     2161 cggaagcgtt gcagttagat atggaactgg aggtggtgtt cgagaagcag aacgacacca
     2221 ttacgctgcc gctgttccgt cctgtcccgg cgaaaggtta aatcgatgcg cagaaacgct
     2281 gttaccgttg tcggcgctgc cgaaacgacc aatttggggg tgatccccga tgtgtcgcag
     2341 atccagttgc acgcggacgc ggcgttgaac gcgatggcgg attgtgggtt gcggcccaag
     2401 gatatcgacg ggattgccac cgccggggag accccggtgc aactggcgca ttatctcggg
     2461 atcacaccga cctgggtgga tgggacgtcg gtcggcggat gctcgttcat gatccatgtc
     2521 cgccatgcgg cggcggcgat cgaggcgggt ctcgcgaaaa cgattctgat cacgcatggc
     2581 gaaagcggcc ggtcgcgcgt cggtgtcgct ggacgttcgg ttgcagcgtc gtcgttgaac
     2641 ggtcagttcg agcagccgtt tgggcctatg ggtccgccga gcatgttcac aattcccgtg
     2701 ctgcgatata tgaagactta tggagtaacg gaagagcaaa tcgccaaggt ttgcgtggtg
     2761 caacgggagt gggcggggaa gaatccgcga gcaacgttca agacgccgat tacgaccgat
     2821 gacgtgttga acagccggat gatcgcgtat ccattccgtt tgctgatgtg ttgccttgtg
     2881 accgacggcg gcggcgcact gatcctgacc tcggccgaac gggcgaagga tttcaagacg
     2941 aagccggtct atatcctcgg caccggggag agcgtggaaa ctccgatggt cagccagatg
     3001 gaggatttta cctcgtctcg cgcgtttcgg gtcgccggtc caacagcgtt ccaacaggcc
     3061 gggatcaacg tgaacgacgt ggatcacctg atgatttatg acgcattcgc gcatctgccg
     3121 atttatggtc tggaggatct cgggttcctg ccgcgcgggg aggcggctgc gttcattgcg
     3181 gcacgcaata cggcacccgg gggcgcattg ccgttgaaca ccaatggcgg agggctgtcg
     3241 tacatgcact cgggcatgta tgggatgtac gctttgcagg agagtgtgcg gcaaatgcga
     3301 ggcatcgcgc cggcgcaggt gccggacgcg aagatttcgg tgtgtcatgg cgtgggtggc
     3361 atgttcgccg cgtccggcac gatcattttc accaatcagg agccgtgagc cggcggttcg
     3421 caatcgtcct atctgggctt gacccggcca tctggcaggg cagtgtggtc gcgccagacc
     3481 atcgggggag gggatcataa tgaccgaaag cctgttcacc ggcctgaaag taatcgactg
     3541 cgcgagctgg attgccggac ccgccgccgc tacaattatg tccgactttg gtgccgacgt
     3601 gatcaagatc gagccccccg gcgttggcga tccctggcgt gcgcgtggac cgatcccggg
     3661 caaggacgtt gattactact ggcagttgac cgctcgtaat aaacgcagcc tggcgatcga
     3721 tctgaaacac ccggacggca tcgccgcgct gcatcggttg gtcgcatccg ctgacgtatt
     3781 cgtcaccaat ttcccattgc cggtgcgtga ccgcctgcaa ctgtcacctg tgcatctgtt
     3841 gccgctgaat ccacggctga tctacgcgtc cttcactgcc tatggtgaag cgggggaaga
     3901 ggcggcgaag accggcttcg attccaccgc gtactgggca cgcaccggtc tcatggacca
     3961 ggtgcgcgcc gaggcaacga catcaccggc ccgctccatg ccaggcatgg gcgaccaccc
     4021 cagcgccact ggcttgtacg ccgctatcgt cactgcgctt taccggcgcg agaagaccgg
     4081 ccaaggcggc gtggtaaagt cgtccctgct gcaaaatggt ctgtgggcca acggctgcgc
     4141 cgtgcaaacc aggctgttcg gcgagcacgt atcgcaccgt ccaacccgcg aggaagcgcc
     4201 gaacgctttg gccaaccact atcaaacccg cgatggccgc tggttcatca tggcaatgtg
     4261 gaatgagcag cggcaattgc gcgccttcct gtccgcgctt ggccgcgagg atctgaccga
     4321 cgatccgcgc ttcgccacgc ccgatgcgcg caagcaaaac gccgctgaac tggtaatcgt
     4381 gctggatgcc gagttcgcca aacgcgatct ggacgattgg cgagcgatcc tcgatagcgt
     4441 tggcataacg tttggcatcg tcggcacagt gaatgaagtg ctggacgacc agcaaatgcg
     4501 tgacagcggt gccctggtgc cattcgcgga cggcgaacat ctaaccgttt cgtcaccgtt
     4561 ccatatcgac ggggtcgaga aagtgccggc acagcgagcc cccgaccttg gccagcacag
     4621 cgaagtggta ttgcgcgaag ccggatatgg tgcagatgcc attgcccgtc tgcgctctct
     4681 gggcgtgctg gcatagtacg cgccgccgga tttacgttga tggcggcggt cgcgttgggt
     4741 gtggccgtgg ccttaccgta tcttcgcccc gaagcgccgc gccgtctcct cttcggcgtc
     4801 attcacggta tgacaggcgc attggggctt ggcctgctta taatcgcact gcaaggtccg
     4861 cgccgcggag atgccatggg cgccgggtcg ttcggcatcg ttgctgcgtt gctgtttggt
     4921 tcggcggtga tgattggtcc ggtgattcgg gtgctcggta aacgaaagcc cagcgtggtc
     4981 ggcctcgtcg tcgtcaccca cgcctcactc gcgattaccg gcttcgtctt attcctcgcc
     5041 tgggcatctc tgtagcgggc gacctgggct gcaggccgcc cgtcacatcg gctattacga
     5101 aacggccaga gaataaatgt ccttcacacc cgccggcaac ggcagcgaat cccacgtcgc
     5161 accgccgtct tccgttgcgt aaatttcgcc ttcgtaacgc gcgccgatcg ccatgacgtt
     5221 cgagttcttc gcgtgcggcg ccaccgacat gattgtgccg tgcacctgaa cccggtcgta
     5281 acggctccag gtctggccct tgtcggtgct ctgatacact gctccgtcct tactcgacgc
     5341 ggcaacgctc agcgcggcgt aaagggtctt gccgtcggcc cccaccttga tgtcccgccc
     5401 ataggtcgtc ggcgagaagc ggccaacttc catatcctgc caggtctcgc cgccatcatg
     5461 tgtctggaac agccccatcc gggcggcaaa aatcacgcca tccgggtcgg ccggattgat
     5521 cgcgatcgcg tggccatcga gcatgccctc gttataggtg ttgctgacga tcttgctctt
     5581 gaggttcggc ttctccgcca gacgcagcag atccgcactg cgatcggtcc agctttcgcc
     5641 aaagttgtcg gtgcgcatca cgccgttcac ttccaatgcg gcgtagatgg tgccacgctt
     5701 gttcggatgc tgcgccatcc gcatgacacg gcacgcgaac ggcatcactg cgcggtccgg
     5761 catgccggga tcgggcatct ccttccacgt ctcgccggta tcttcgctgc gataaaccga
     5821 aatcggcgag ccaccggcat aaaccagctt cggattttct gagtcgacca ggaacgacca
     5881 gatttgtcgt gcaccaggga agttggcccg ctggaacgtt ttgcctttgt cggtgctgcg
     5941 atacacgcca tccttggtgc ccgcgaacac cacgttggga tcggtcggat gcacgtggac
     6001 ggcataagtt tcgtgttcgc tgatcggctg cgtccagctt tccgcgccgg cggcccggct
     6061 gaatacgcca accctaccca cctgatccgc ccgcccgacg taaccggcga caccggcata
     6121 gtaatttgac ttcgccatgg cacgctcctc tcctgaattc cttgtgccag cttaccggag
     6181 cggcgtccgc ttggccagag cggtccggat ggcgtagcct gacgccgagc ctgcgaaggg
     6241 agtggaacca tgccaaacgt caccgccgaa cgcctgaccg agatcgagat cgggctgctg
     6301 attgctgccg gcgcctcggc cgaggaagct gaaatcatcg cccgttataa tgttggcgcc
     6361 aatttggtgg ggcatgactc ccacgggatc attctgattc cgcaatacat agaccgcatc
     6421 aaggccggcc atatcgtgcc cggcgcaccc tgggagatcc aacaggaaac cgcgaccacg
     6481 acagtgatcg acggcaactg gggttttggc tacgtggtca acgaccgggc gatgcgttac
     6541 acgatcgaga aggccaagaa gcaaaacgtc gccgtcgcca ccgtgcggcg tcagagccac
     6601 atcgggcggt tggcgagtta tccgctgctg gcttccgccg agggcatgat cgcaatgatc
     6661 actgccgatt ccgggcgatc ttccaaggcc gtcgcgccgt atggcggggc caaggcgcgg
     6721 cttggcacca atccgatttg tttcgcgatt ccgtccaatc tggatgggcc gctggtgttc
     6781 gacatg
//
LOCUS       DATAVD010000575         5642 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2474889, whole genome shotgun sequence.
ACCESSION   DATAVD010000575 DATAVD010000000
VERSION     DATAVD010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5642
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2474889"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..497
                     /locus_tag="VHX39_10675"
     CDS             <1..497
                     /locus_tag="VHX39_10675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991621.1"
                     /translation="RVEKRVGLHEHPGTPGVPEAARAILCAIPGLDFVDLEQPRVSYM
                     CNKLTPLPAFKQDLHRNQLQAAADAGVTALAGVYHACHRELCSHERDWPFEVVNFLEL
                     VGESMGLQRPDLFKRLKIMQDVDAILQDSAGLIETNGLDLEEARDVILRDMLGEQPLP
                     LVVS"
     gene            complement(620..856)
                     /locus_tag="VHX39_10680"
     CDS             complement(620..856)
                     /locus_tag="VHX39_10680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991622.1"
                     /translation="MNDVRYTDDGGEMDGVGPRVADTLPPPDQLVIPDDGVKVTLTLS
                     RQSVDFFKQVARKYHVPYQRMIRNLVDEYARIHR"
     gene            complement(933..1982)
                     /locus_tag="VHX39_10685"
     CDS             complement(933..1982)
                     /locus_tag="VHX39_10685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010501874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-2,3-aminomutase-like protein"
                     /protein_id="HEX3991623.1"
                     /translation="MGQVAEDNISHVRDSRTLRDAASLLAAGLIAEADVAGIAATEAR
                     YAVAIPPAMRALIETPDDPIGRQFVPDFSELATASFERDDPIGDDALSPVKGVVHRYP
                     DRALLKPLLICPVYCRFCFRREHVGPDGGVLTEAELEAAFAWFAAHPAVTEVILTGGD
                     PLMLSPRRLSGIIARLSAMPHIRTIRIHSRVPVADPERLTDDLAAAMETDRSLWLVVH
                     ANHAREFTPAAGQALRRVRALGIPLLGQSVLLRGVNDSPAALEALFRAMVSVRMKPYY
                     LHQLDPAPGTARFHVPIEEGRALLETLRGRVTGLAWPTYVLDIPGGFGKVPIGPDYRQ
                     ADGSVRDIRGVIHPV"
     gene            2142..2555
                     /locus_tag="VHX39_10690"
     CDS             2142..2555
                     /locus_tag="VHX39_10690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014189294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX3991624.1"
                     /translation="MVDVPNRPEYQSELFKKGLAVRREVLGGDYVDGSLARADDFNAV
                     FQQMTTEMAWGMCWTRPGLDRKTRSIINLGMLSALNRGSELRLHLKAALTNGVTRDEI
                     KEVLVQVGGYCGIPAALEAFKIATEVFKEVDAAKG"
     gene            2562..3464
                     /locus_tag="VHX39_10695"
     CDS             2562..3464
                     /locus_tag="VHX39_10695"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011930642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3991625.1"
                     /translation="MTKTVGFVGVGNMGWPMAACLVKAGFTVNVNDSRREMADNFVQQ
                     VGGFAPDSLRQLAETSDVIVTMLPTSVIVERVLSGGDDNLFAGMKPGTVIIEMSSGVP
                     SVTQRLAEQVAALGGTLIDGPVSGGVPRAKTGQLAIMVGGDEATIDRVMPVLSAMGAS
                     VLKTGGVGSGQAMKALNNMVSTGGFLIGIEALLIGQRFGLDPAVMTDVLNAATGMNNS
                     TQKKFKQFVLSRKFDAGFAMGLLAKDLSIAMQVGRETATAAPLSALVNEMIVSAQAKF
                     GPNADHTEMAKLCELLAGSELGDG"
     gene            3464..4222
                     /locus_tag="VHX39_10700"
     CDS             3464..4222
                     /locus_tag="VHX39_10700"
                     /EC_number="3.6.1.26"
                     /inference="COORDINATES: protein motif:HMM:NF003986.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol diphosphatase"
                     /protein_id="HEX3991626.1"
                     /translation="MRRLLALLACVLLAPAGARADPSALWKIVNGKCVPHEQVERDPT
                     PCSSVNLSEGVARGYAVLKDREGIAQFLLIPTARISGIEDPKILEMNAPNYWDAALRA
                     RYFVEDRLQTTLPRDGIALAINSSVGRSQDQLHIHIDCIRPDVRKILAANLDKIGGVW
                     TPFPIELAGHSYQAIRINHETLDGINPFRILAEGDPATGGDISKHTLVLVGETFADGS
                     NGFVLLDDKANLAVGNRASGEQLEDHACAVAGKQ"
     gene            complement(4262..5515)
                     /locus_tag="VHX39_10705"
     CDS             complement(4262..5515)
                     /locus_tag="VHX39_10705"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX3991627.1"
                     /translation="MNAPIDVDLKTLAYSTPLEDLDPSDPRIYYEDAWQPYFERFRRE
                     APVHRVKDSPYGPYWSVSKYKDIIQVEVNHKVFSSSDEVGGIMINDAPKGMERTSFIR
                     MDPPDHDQQRREVSSTVNPVTLAKMEDLIRTRTNMVLDRLPRNEPFNWVEHVSIELTS
                     MMLATLFDYPIEDKRQLIRWSDTFICDIKAPDAPVKSEEERFAKQMEFAEHMNGYWED
                     RAKKPKSFDVISILAHGDATKDMTLREKMGVLILFLVGGNDTTRNSMTGGLWGLSQFP
                     DQFQKLRDNPALTTSLIPEIVRWQTPVIHMRRTATEDFELRGQQIKAGDKVVIWYISG
                     NRDEDHIDQPNQFIVDRARPREHMSFGFGIHRCLGNRLAEMQLKILWDEVLRRDIRIE
                     VLDKPVYAYSNFLHAIRNLPVRIAA"
BASE COUNT         1069 a         1720 c         1784 g         1069 t
ORIGIN      
        1 accgtgtcga gaagcgggtc ggcctgcacg agcatcccgg cacccctgga gtgcccgagg
       61 ccgcgcgagc gatcctgtgc gccattcccg gcctggattt cgtcgatctg gagcaaccgc
      121 gggttagtta catgtgcaac aagctgaccc cgctgccggc attcaagcag gacctgcacc
      181 gtaatcagtt gcaggctgcc gccgacgccg gggtgaccgc actggccggg gtctaccatg
      241 cctgccatcg ggaactgtgc agtcacgaac gcgactggcc cttcgaggtc gtcaacttcc
      301 tcgaactggt gggcgagagc atggggctgc agcgccccga tttgttcaag cgtctgaaga
      361 tcatgcagga tgtcgatgcg atcctgcagg attcggccgg actgattgaa acgaacgggc
      421 ttgatctgga ggaagcccgc gatgtgatcc tgcgtgatat gctgggggaa cagccgctgc
      481 cgttggtggt atcgtaagga agcgatttgg aaccgcagat gaacgcaaat gaacgcagat
      541 agagttttca gctttactta tttgcgttca tctgcgttta tttgcggttc caaatttctt
      601 ttatccaaat gaaacaacct taccggtgaa tccgggcata ttcgtccacc agattgcgga
      661 tcatgcgttg gtaaggcaca tggtacttgc gtgccacctg cttgaaaaaa tcgacgctct
      721 gccggctaag cgtcaaggtc accttcaccc cgtcgtccgg gatcaccagt tggtccggag
      781 gcggcaacgt atcggcgacc ctcggaccga cgccgtccat ctcgccaccg tcgtcagtat
      841 agcgaacgtc gttcattgtc ataaatcctt ttacccttgc gccaggaaac cgctaccggc
      901 gcgatcaggc ccagcaattc cataacaaac ggttaaaccg ggtgaataac gccccgaatg
      961 tcccgcaccg atccatccgc ctgccggtaa tccggcccga tcggcacttt gccgaacccg
     1021 cccgggatat ccagcacata agtcggccac gccagtcccg tcacccgtcc gcgcaacgtt
     1081 tccagcagtg cgcggccttc ctcgatcggg acgtgaaacc gagcggtgcc gggtgcggga
     1141 tccaactgat gcaaataata tggtttcatc cgaactgaaa ccatcgctcg gaataacgcc
     1201 tccagcgccg ccggactgtc gttgacgccg cgcaacagaa ccgactgccc cagcaacgga
     1261 atccccagcg cccgcacccg tcgcaacgcc tgccccgcgg ccggcgtgaa ctcccgcgca
     1321 tggttggcat ggaccaccag ccatagcgac cgatcggttt ccatggcggc ggccagatcg
     1381 tccgtcagcc tctccggatc ggccacgggc acgcgggagt ggatacggat agtccggata
     1441 tgcggcatcg ccgacaggcg ggcgataatg ccgctcaacc gccgaggcga cagcatcagc
     1501 ggatcgccgc cggtcaggat gacctcggtc accgccggat gggcggcgaa ccatgcgaac
     1561 gcggcctcca actcggcctc ggtcaacacg ccgccgtcgg gaccgacatg ttcgcggcgg
     1621 aagcagaacc ggcagtacac cgggcagatc agcaacggtt tcagcagcgc ccggtccgga
     1681 tagcgatgca ccacgccctt gaccggagac agcgcgtcgt cgccgatcgg atcgtcgcgt
     1741 tcgaacgaag cagtcgccaa ctcggagaaa tcgggaacga actgccgccc gatcggatcg
     1801 tccggcgttt cgatcaacgc gcgcatcgcc ggagggatgg cgacggcata gcgcgcctcg
     1861 gtcgccgcga tgccggcgac atcggcttcc gcgatcagac cggcggccag cagcgacgcg
     1921 gcatcgcgca acgtccggct gtcacgaacg tgtgatatat tgtcctcggc gacctgtccc
     1981 atgcatcctt caacccggcc ggcactgatc cggccctcac gatccgttcc atacacaaga
     2041 tcggcgatgc gtgaagccat gatctgcccg accgctggct tgcccgtccg tcggaccgcg
     2101 cctaggttcc cgcccgtcca atcgaaatca ggagacaacc tatggtcgac gtcccgaatc
     2161 gccccgaata ccaaagcgaa ctctttaaga agggtctcgc cgttcgccgc gaggtgctgg
     2221 gtggcgacta cgtcgatggt tcgctggccc gcgccgacga tttcaacgcg gtgttccagc
     2281 agatgacgac ggaaatggcg tggggcatgt gctggacccg ccccgggctt gaccgcaaga
     2341 cccgcagcat catcaacctg ggcatgctgt ccgcgctgaa ccgcggttcg gaactgcgcc
     2401 tgcacctgaa ggcggcgctg accaacggcg tgactcgaga tgagatcaag gaagtcctgg
     2461 tccaggtcgg cggctattgc ggcatccccg ccgcgctgga agccttcaag atcgccactg
     2521 aggtgttcaa ggaagtcgac gcggcgaaag ggtaatcttc catgaccaag acagtcggat
     2581 tcgtcggcgt cggcaacatg ggttggccga tggccgcctg ccttgtgaaa gccggcttca
     2641 ccgtcaacgt gaatgattcg cgccgcgaaa tggcggacaa tttcgtgcag caggttggcg
     2701 ggttcgcgcc cgacagcctg cggcaactgg ccgagacatc ggacgtgatc gtcacgatgc
     2761 tgcccacaag cgtcatcgtc gagcgggtgc tgtccggcgg cgatgacaac ctgttcgccg
     2821 gcatgaagcc cggcaccgtc atcatcgaaa tgagttccgg cgtgccgtcg gtcactcaac
     2881 ggctggccga acaggtcgcg gcgcttggcg gcaccctgat cgacggtccg gtttcgggtg
     2941 gcgtgccgcg ggcgaagacc gggcaactcg cgatcatggt cgggggcgat gaggcaacga
     3001 tcgatcgggt gatgccggtg ctttccgcca tgggcgcgtc ggtgctgaaa accggcggcg
     3061 tcgggtccgg gcaggcgatg aaggcgctga acaacatggt cagcaccggc ggtttcctga
     3121 tcgggatcga ggcgctgctg atcggccagc gtttcggcct cgacccggct gtcatgacgg
     3181 atgtgttgaa cgccgcgacg gggatgaaca actcgacgca gaagaagttc aagcagtttg
     3241 tgctgtcgcg gaaattcgac gcggggttcg ctatggggtt gctggcgaag gatctgtcca
     3301 tcgccatgca ggtcggccgc gaaaccgcca ccgccgcacc gctgtccgcg ttggtgaacg
     3361 aaatgatcgt ttcggcgcag gcaaagtttg gtccgaatgc ggatcatacc gaaatggcga
     3421 aactgtgtga gttgctggcc gggtcggagt tgggggacgg ctgatgcgcc gcctcctggc
     3481 gttgctggct tgtgtgctcc tcgcacccgc cggtgctcgg gccgacccat cggcgctatg
     3541 gaagatcgtc aacggcaaat gtgtgccgca cgaacaggtg gaacgtgacc caaccccctg
     3601 ttcgtcggtc aatctgtcgg aaggcgttgc ccgaggctat gccgtgctga aagacagaga
     3661 gggcatcgcc cagtttctgc tgatcccgac tgcgcgcatc agcgggatcg aggacccgaa
     3721 gatcctggag atgaacgctc ccaactactg ggatgccgcg ttgcgggccc gctacttcgt
     3781 cgaggatcgc ttgcagacaa cgttgccgcg cgacggcatc gccctggcga tcaattcgtc
     3841 ggtcggacgc tcgcaggatc agttgcatat ccacatcgac tgcatccggc ccgacgtgcg
     3901 caagatcctg gccgcgaatc tcgacaagat cggtggggtg tggacgccgt ttcccatcga
     3961 gctggccggc cattcctatc aggcgatccg catcaaccat gagacgctgg acggcatcaa
     4021 cccgttccgg attctggccg agggcgatcc cgccaccggc ggcgacatca gcaagcacac
     4081 gctggtcctt gtgggcgaaa cctttgccga cggcagcaac ggattcgtgc tgctcgacga
     4141 caaggctaac ctcgcggttg gtaaccgagc ctcgggggag cagttggagg accacgcctg
     4201 cgcggtggcg gggaagcagt aaacaccgag cgcctcttgg gaaaggacgc tcggtgaagg
     4261 ctcaggcggc gatgcggacc ggcaggttgc ggatcgcatg caggaagttg gaataggcgt
     4321 agacgggctt gtccagcacc tcgatcctga tgtcgcggcg caagacttcg tcccaaagta
     4381 ttttcaactg catctccgcc aggcggttgc ccaggcagcg atggatgccg aatccgaacg
     4441 acatgtgctc gcgagggcgg gcgcgatcga cgatgaactg gttcggctgg tcgatgtggt
     4501 cctcatcacg gttgcccgag atgtaccaga tcaccacctt gtcgccggcc ttgatctgct
     4561 gtccgcggag ttcaaagtcc tcggtggcgg tgcgccgcat atggatcacc ggcgtttgcc
     4621 agcgcacgat ttccgggatc aggctggtgg tcagcgcagg attgtcccgc agcttctgga
     4681 actgatcggg aaattgcgac aagccccaca gcccgccggt catggaattg cgggtggtgt
     4741 cgttgccgcc caccagaaac aggatcagca cgcccatttt ctcgcgcagc gtcatgtcct
     4801 tggtcgcgtc gccgtgcgcg aggatcgaga tcacgtcgaa gcttttcggc ttcttcgcgc
     4861 gatcctccca gtagccgttc atatgttcgg cgaattccat ctgcttggcg aagcgctctt
     4921 cctccgactt taccggtgcg tcgggcgcct tgatgtcgca gatgaacgtg tcggaccagc
     4981 ggatcaattg ccgtttgtct tcgatcggat agtcgaacaa tgtggcgagc atcatcgatg
     5041 tcagctcgat cgagacgtgt tccacccagt tgaacggttc gttgcgtggc aaccggtcca
     5101 gcaccatgtt ggtgcgggtg cggatcaggt cctccatctt ggccagggtg acgggattga
     5161 cggtggaact gacctcgcgc cgctgctgat cgtggtcggg cgggtccatg cggatgaaac
     5221 tggtgcgttc catgcccttg ggcgcatcgt tgatcatgat gccgccgact tcatcggacg
     5281 aggagaacac cttgtggttc acctcgacct ggatgatgtc cttgtacttg gataccgacc
     5341 aataggggcc gtacgggctg tccttgacgc gatgcaccgg ggcttcgcgg cggaagcgct
     5401 cgaagtacgg ttgccaggcg tcttcgtagt aaatccgcgg gtcgctggga tcgaggtctt
     5461 cgagcggcgt gctataggcg agcgtcttca gatcgacatc gattggtgcg ttcatggccg
     5521 tcctcttgcc tgtttatcgg tcattagggt cggcggacgt gagtcccggc gggacggtag
     5581 cctgtctgga ggaagaaagc caagaccagg gcgctgccct ggacccgcca agggcatagc
     5641 cc
//
LOCUS       DATAVD010000576         3946 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2474900, whole genome shotgun sequence.
ACCESSION   DATAVD010000576 DATAVD010000000
VERSION     DATAVD010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3946)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3946)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3946
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2474900"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..603)
                     /locus_tag="VHX39_10710"
     CDS             complement(<1..603)
                     /locus_tag="VHX39_10710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylcholine/phosphatidylserine synthase"
                     /protein_id="HEX3991628.1"
                     /translation="MSEPVHRFPIRRSRRLRPRVRPRYRGPSFNRIVPNLMTMVGLCA
                     GLTAMRFAMEGRFEAAAVAITIAGVVDGLDGRLARLLKGTSHFGAEFDSLSDFACFGV
                     APGLTVYEWSLQRLGGIGYAICILFAVCMALRLARFNAMADDRPRPAYAYNFFTGVPA
                     PAGAGLALFPVFLGLEANSQGLEALNAVSRHPLFCGPILVG"
     gene            complement(600..1271)
                     /locus_tag="VHX39_10715"
     CDS             complement(600..1271)
                     /locus_tag="VHX39_10715"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEX3991629.1"
                     /translation="MSLAIDLRNAFPPPHPAGRPFIFGCIAVMAIGLFLNLWLTLVSL
                     VAGLFCVYFFRDPARVPPARAGAILAPADGRIVSVAPGLPPAELGLGPAVRWRVSIFL
                     SVLNVHVNRVPIDGTVTRIAYRHGAFLNASLDKASEANERNAIAFRLSDGRELVVVQI
                     AGLIARRILCSLREGDAVHGGDRLGIIRFGSRTDLYLPEGIQPLVCEGQTMIGGETVI
                     AEISP"
     gene            1359..1826
                     /locus_tag="VHX39_10720"
     CDS             1359..1826
                     /locus_tag="VHX39_10720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991630.1"
                     /translation="MPFKEPFILGPFSVDAEGRLSPAREGISAGFSVRWHGRIVHARL
                     EQSAGHDGCLHIRSSLGRIPSTASDPAIRVACLSMLRSLLGALPPTWSARLLPDHQPE
                     LEVETTVTLPIKVTNLVAELTIFLIILSPYLDLLDRAGVTLVASLADPVTAAS"
     gene            1828..2244
                     /locus_tag="VHX39_10725"
     CDS             1828..2244
                     /locus_tag="VHX39_10725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEX3991631.1"
                     /translation="MGSTPPPPSDAVPALSGRSRRGQAADRRGRNAEDAARLALERDG
                     WSILARRLRTSAGEIDMVAEKDGLLAIVEVKARPRLADAAASLSDRQQARLISATEIV
                     LANNPDWGAQGVRFDLLLVDAAGAVRRIADAFRGNG"
     gene            complement(2255..3781)
                     /locus_tag="VHX39_10730"
     CDS             complement(2255..3781)
                     /locus_tag="VHX39_10730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEX3991632.1"
                     /translation="MPNRSPSHAMAQVATFAFSGIDAVPVEVQVQLSSGAPNFLIVGL
                     ADKAVAEARERVRAAFHAMGLSLPPRRILINLRPADLIKEGSHFDLPLALGVLAAMDI
                     VPRDLLSEYAALGELSLDGSLNKVAGVLPAAIAASSRDLGLICPEAQGREAAWAGHIN
                     ILAPPDLTALISHFKGTRVLVPPVAGGIVDIGRGPDLRDVKGMETARRAIEIAAAGSH
                     NILLIGPPGSGKSMLAARLPGLLPDLDARAALEVGMIHSVAGLLENGCLIVRPPFREP
                     HHSASQAALTGGGLRARPGEVSLAHRGVLFLDELPEFPRQTLESLRQPMESGRTTVSR
                     ASAHITYPARFQLVAAMNPCRCGYLGDGERECGHAPRCGEEYRNRISGPVLDRIDLAV
                     DVQPATAAELTRAPHGEASSVIAERVKRARLAVRDRHGASGPASNAEVESDAVCLTLD
                     ATKLVEEAMNRLGLSGRGRTRVLRVARTVADLAGADTVNRFHVAEALSYRHRAKPRVR
                     "
BASE COUNT          822 a         1178 c         1204 g          742 t
ORIGIN      
        1 cccgacaagg atggggccgc aaaaaagcgg gtggcgggat actgcgttca gcgcttccag
       61 tccctgtgaa ttcgcttcca accccaaaaa gaccggaaac aacgcgagtc cggcaccggc
      121 cggcgcaggg acaccggtaa agaaattgta tgcatacgct ggacgtggcc gatcatctgc
      181 catggcattg aagcgcgcga ggcgcagtgc catgcagacc gcgaataata tgcatatcgc
      241 atagccaatg ccgcccagac gctgaagcga ccattcgtag acggtcaatc caggggccac
      301 gccgaagcat gcgaagtctg ataagctatc gaattcggcg ccaaagtgcg aggttccctt
      361 tagaagccgc gccaaccgtc cgtccagccc atcgaccaca ccggctatgg tgatagcgac
      421 cgcggctgcc tcgaagcgac cctccatggc gaatctcatg gcggtcagtc ctgcgcagag
      481 tccaaccatc gtcataagat tcggaacgat acggttgaac gacggacctc ggtagcgcgg
      541 ccgaacccga ggacgaagtc gtctggaccg tcggattgga aaccggtgaa caggttcact
      601 catgggctga tctccgcgat cacggtttct cctccgatca tggtctgacc ttcgcaaacc
      661 aaaggttgga taccttccgg caaatacaaa tccgtccgac tgccaaatcg tatgatgccc
      721 aggcgatcgc cgccatgaac ggcatcaccc tcccgcagcg agcacaggat gcggcgagcg
      781 atcaggccgg cgatttgcac gacgaccagt tcccttccgt cggataatcg gaatgcaatc
      841 gcgtttcgtt cgttggcctc gctggcttta tcgaggctcg cgttgagaaa ggcgccgtgc
      901 cgatacgcaa ttcgcgtaac cgttccatcg atcggcacgc ggtttacatg gacgttcaga
      961 acggaaagaa agattgaaac gcgccacctg acagccggtc caagtccaag ctcggccggg
     1021 ggaagccctg gcgccaccga tacgatacgc ccatccgcag gggccaggat ggcgccggct
     1081 cgtgcgggcg gaacgcgggc aggatcccgg aagaaataga cgcagaataa cccagcaacc
     1141 agactgacga gcgtcaacca gagatttagg aagaggccaa tcgccatgac ggcgatgcag
     1201 ccgaaaatga acggcctgcc ggcaggatgc ggtgggggga aggcattccg taaatctatc
     1261 gccaatgaca tttcggtgcg gctcatccag ggggttgttt atggatgttt catctttcgc
     1321 gagcaacata ccttccgtcg gaccggggag tggttggtat gccgttcaag gaacctttca
     1381 tacttgggcc gttttcggtc gatgccgaag ggcgtttgtc acccgcccgc gaagggattt
     1441 cggccggttt cagcgtccgt tggcacgggc ggatcgtcca cgctcgcctt gagcaaagtg
     1501 ctggacacga cgggtgcctg catattcggt ccagtttggg acgcatcccg agtacggcat
     1561 cggaccctgc cataagagtc gcgtgcctct cgatgttacg tagcttgctg ggcgcactgc
     1621 cgccgacctg gagtgcacgc cttctgccag atcatcagcc ggaacttgag gtggagacga
     1681 cagtgacgct cccgatcaag gtcacgaatt tggtagctga attaacaata ttcctgatca
     1741 tcctgtctcc ctaccttgat ctcctggatc gggcgggcgt caccctcgtc gcttcattgg
     1801 ctgatcctgt cactgcagct tcatgaggtg ggaagcacgc cgccgccacc cagcgatgcc
     1861 gtgcctgcgt tgtcaggtcg ttcccgtcgc gggcaggccg ccgaccggcg aggccgtaat
     1921 gccgaggatg ccgcccggtt ggcgctggaa cgggatggtt ggagcatcct ggcgcgccgg
     1981 cttcgaacgt cggccggcga gatcgatatg gtcgcggaga aagatggtct cctggcgatc
     2041 gtggaggtca aggctcgccc cagactggcc gatgcagcag cctcgctgtc cgatcgacag
     2101 caggctcgac tgatctccgc caccgaaatc gttcttgcaa acaaccccga ttggggcgcc
     2161 cagggtgtgc ggttcgatct actgttggtc gacgctgccg gcgctgtgcg gcgcattgct
     2221 gacgcctttc ggggcaacgg ttgaagtgcc gatctcagcg gacccggggt ttagctcgat
     2281 gccgatacga caacgcttca gcgacatgga agcgattgac ggtgtcggca ccggcaagat
     2341 cggcaacggt acgcgcaact cttagcacgc gagttcggcc acggcctgac aaccccaacc
     2401 ggttcatcgc ctcttcgacc agctttgtcg cgtccaacgt aaggcatacg gcgtcgctct
     2461 cgacttccgc attgcttgcc ggaccggatg cgccgtggcg gtcacgtacc gccaaccttg
     2521 cacgtttgac tcgctctgcg atgacggaac tcgcctcacc gtgcggagca cgggtgagtt
     2581 ccgcagcagt tgcaggttga acatcaaccg caagatcgat ccggtcgagg acgggaccac
     2641 tgattcgatt gcggtattcc tcaccgcagc ggggtgcgtg gccgcattcc ctttcgccat
     2701 cgccgagata cccgcaccgg catggattca ttgctgccac gagttggaaa cgcgcgggat
     2761 aggttatgtg tgccgatgct ctcgagacag tggtgcgccc agattccatc ggttggcgca
     2821 acgactccag tgtttggcga gggaattccg gcaactcatc cagaaacaat acgcctcggt
     2881 gtgccagtga cacctcccca ggcctggcac gtaatccgcc gcctgtgagg gccgcttgtg
     2941 atgcagagtg gtgcggttca cgaaatggtg gccgtacgat caggcaaccg ttctcgagga
     3001 ggccggcgac gctgtgaatc ataccgacct cgagcgccgc tctggcatcc aggtccggga
     3061 gaagcccagg tagccgggca gcgagcatcg atttgcccga ccctggaggc ccaatcagca
     3121 ggatgttgtg actgcctgct gcggctattt cgattgcgcg ccgagcggtt tccatacctt
     3181 tgacgtcacg cagatcgggg ccacgcccga tgtcaacaat acctccggca accggcggaa
     3241 cgaggacgcg ggtacctttg aagtgactga tcagtgccgt cagatcggga ggcgccagta
     3301 tgttaatgtg acctgcccag gcagcttccc ttccctgtgc ttctgggcaa attagcccaa
     3361 ggtcgcgtga cgatgcggca atcgctgccg gcagcacgcc ggccacctta ttgagtgacc
     3421 catccagcga tagctcgcca agggcggcgt actccgaaag aagatcgcga ggcacgatat
     3481 ccatcgccgc gagaacgccg agtgcgagcg ggaggtcaaa atggctgcct tccttgatga
     3541 gatccgcggg ccttaaatta atcagtatac ggcggggtgg cagggacagg cccatggcgt
     3601 ggaacgccgc tcgaacccgt tcacgagcct ctgcgacagc tttatccgca agaccgacga
     3661 tgaggaaatt tggcgcaccg ctggagagct gcacctgaac ttctaccggt accgcatcaa
     3721 ttcctgagaa agcgaacgtg gccacctgag ccatggcatg ggatggcgaa cgattgggca
     3781 tgccgggaac ataagaccga gtagtaaaca gaaagataat gcaccgtacg cgatcagggc
     3841 cggacacccg aaggttttac tgggcggttg atctgacggc cggccgccga cgaattcccg
     3901 cctgcacgtg ctggaaattc agcgtcgccg ggtcagcgac gaccgg
//
LOCUS       DATAVD010000577         2093 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2100773, whole genome shotgun sequence.
ACCESSION   DATAVD010000577 DATAVD010000000
VERSION     DATAVD010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2100773"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..766)
                     /locus_tag="VHX39_10735"
     CDS             complement(50..766)
                     /locus_tag="VHX39_10735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEX3991633.1"
                     /translation="MSEAAAAFLRARRRPLELVIFDCDGVLIDSEPVCNRVVAEILTQ
                     DGWPMTANECEQRFIGMSFYTMQPQIEAHLGRSLGQDWVNRVVAVVTDAMAREVEPVA
                     GARDALDAVTAMGLKWRIASNSSHIEMAAKFGRAGWLELVDGRLHSSVDVIALGGQGK
                     PAPDLFLAAAAAEPVAPAHCLVIEDSVHGANAARAAGMDCLGFAAHNDGAALRAAGAV
                     PFHSMHDLPALLRASVACPF"
     gene            complement(763..1557)
                     /locus_tag="VHX39_10740"
     CDS             complement(763..1557)
                     /locus_tag="VHX39_10740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acyl homoserine lactonase family protein"
                     /protein_id="HEX3991634.1"
                     /translation="MIPWEVYAVRYARNDNAKRSTNFIGGDPHDAPMPLDYFVWAIRQ
                     GSRTIILDTGFDEPMGKKRNRQFLRSPAVGLKAIGVEPDQVEDVILSHLHYDHCGNYE
                     MFPRANYHVQEIEMAYCTGRCMCHDGLRGPFEEDDVVAMVRKLFARRVVFHDGEGQVA
                     EGVTVHHVGGHSKGLQFARVFTQRGWMVLASDASHFYANFETGRAYPVLHSHEDTLRG
                     YETMKRMASAPNAIIPGHDPLVTARYPAAAPGLEGIALRLDVEPGA"
     gene            complement(1554..>2093)
                     /locus_tag="VHX39_10745"
     CDS             complement(1554..>2093)
                     /locus_tag="VHX39_10745"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3991635.1"
                     /translation="KPDFVLLQSTNVGDDKLLVEKFAEFGLTAKKMPLIGGGGHWCSP
                     ELVKLTGPENLEGIIVALADWPGKKAVDLGKRFIARTGEPWFGHDSIFAYAHVMILKT
                     AIEQAGSADRHKVAEALHTMNITDGPADLFPDGRVSYDEKGRRKGAKICIVQYHNGVP
                     IPVYPDSIATGEPFWPKTS"
BASE COUNT          405 a          669 c          617 g          402 t
ORIGIN      
        1 gcgaccatcg agatgatgtg aaacgatttg atccacggat acagtgtggt cagaacggac
       61 atgccacaga agctcgcagc agcgccggaa gatcgtgcat ggaatgaaac ggtaccgcac
      121 cggccgcgcg caatgccgcg ccatcgttgt gggcggcaaa gcccaggcaa tccatgccgg
      181 cggcgcgggc ggcgtttgcg ccgtggacgc tgtcctcgat caccaggcaa tgcgccggcg
      241 caacgggttc ggctgcggcg gctgccagga acaggtcagg cgccggcttg ccctggccgc
      301 caagcgcgat cacgtcgacc gagctgtgca acctgccatc aaccagctca agccaacccg
      361 cgcggccaaa tttcgcggcc atttcgatgt gcgaagaatt ggatgcgatg cgccatttca
      421 atcccatcgc ggtgaccgcg tccaatgcgt cgcgagcacc ggctaccggc tcgacctcgc
      481 gagccatcgc atcggtcacc acagccacga cacgattgac ccagtcttgg ccaagcgaac
      541 gaccaagatg ggcttcaatt tgcggctgca ttgtataaaa actcatgccg atgaagcgtt
      601 gttcgcattc gttcgcggtc atcggccaac catcctgcgt caggatctcg gcgaccaccc
      661 ggttgcacac gggctcgctg tcgatcagta cgccgtcgca atcgaaaatc accagttcga
      721 gcggccgccg ccgtgcccgg agaaacgcag cagcggcctc gctcatgcgc cgggttccac
      781 gtccaaccgc aatgcgatgc cttccagtcc aggcgctgcg gcgggatagc gcgccgtcac
      841 cagtggatcg tgacccggaa tgatcgcgtt cggtgcgctg gccatccgct tcatcgtttc
      901 gtagccgcgc aaagtgtctt catggctgtg caggaccgga taggcacggc cggtttcaaa
      961 gttggcatag aaatggctgg catcggacgc cagcaccatc cagccgcgtt gtgtgaacac
     1021 acgggcaaat tgcaggcctt tgctgtggcc accgacgtga tggacggtca cgccttcggc
     1081 aacctggccc tcgccgtcgt gaaacaccac gcgtcgggcg aacagcttgc ggaccatcgc
     1141 cacgacatcg tcttcctcga acgggccacg cagcccgtca tggcacatgc accggccggt
     1201 gcagtacgcc atctcgattt cctgcacgtg gtagttcgcg cgcgggaaca tctcgtaatt
     1261 gccgcaatga tcgtagtgca gatgcgacag gattacgtct tccacctgat ccggttccac
     1321 gccgatggct ttcaggccaa cggcggggga gcgcaggaac tggcgattgc gtttcttgcc
     1381 catcggctca tcgaagccgg tgtccagaat gatcgttctg gacccctgcc tgatcgccca
     1441 tacgaagtag tccaacggca tcggcgcatc gtgcggatcg ccgccgatga agttggtcga
     1501 ccgtttcgcg ttgtcgttac gcgcgtaacg gaccgcataa acctcccatg gaatcacgag
     1561 gttttcggcc agaacggttc gccggtggca atcgaatccg ggtaaaccgg aatcggtaca
     1621 ccgttatggt attgcacgat gcagatcttg gcacccttcc gccggccctt ttcgtcgtag
     1681 ctgacgcgtc cgtcggggaa caggtcggcg ggtccatcgg tgatattcat cgtgtgcagc
     1741 gcttccgcga ccttgtgccg gtcggccgag ccggcctgct cgatcgccgt cttcaggatc
     1801 atcacgtgtg cgtaagcgaa gatcgagtcg tgaccaaacc agggttcgcc tgtgcgggcg
     1861 atgaaccgtt tcccgagatc caccgccttc ttcccgggcc agtcggccag cgcgacgatg
     1921 atgccttcca aattctccgg tccggtcaat ttcaccagct caggagagca ccagtgccca
     1981 ccgccgccga tcagcggcat ctttttcgcg gtcaatccga attcggcgaa cttctcgacc
     2041 agcagcttgt cgtcgccaac gttggtcgac tgcaacaaga cgaaatccgg ttt
//
LOCUS       DATAVD010000578         3400 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_802087, whole genome shotgun sequence.
ACCESSION   DATAVD010000578 DATAVD010000000
VERSION     DATAVD010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3400
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_802087"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..730)
                     /locus_tag="VHX39_10750"
     CDS             complement(<1..730)
                     /locus_tag="VHX39_10750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3991636.1"
                     /translation="MGRLDRGDGVELAWCRLDGASPTVVFLPGFRSDMNGEKATALAA
                     FCAARGQAMLRFDYSGHGTSGGQFELGTIGQWAADALTVLDRLTSGQVILVGSSMGGW
                     LALLTALRRPERVAAIVGVAAAPDFTEKLMWDAMTFEERAKVMRDGKLQIPGKYGEPT
                     TITHALIEDGRKHLLLDDPILLDCKVRLLHGQADPDVPWEMALRTAEQLTAQDVEIIL
                     VKDGDHRLSRPCDLALLRRTLAGLL"
     gene            948..>3400
                     /locus_tag="VHX39_10755"
     CDS             948..>3400
                     /locus_tag="VHX39_10755"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX3991637.1"
                     /translation="MSSHLAGTAGPHRGAPGDGGTAVHARDGEAGSYRRRCIVLLLAG
                     IIGSGISIGMFAAIDGWETHVAELRFSSDARDRLRTINSGLDDATDLLWSLRAYLETM
                     RHPVSRSEYMTFSSALRSRVVGLRDTGWAPRVTAAGRETFERDVRATGLPDFQIVERG
                     ADGKLVRAADRAEYFPVLYSDPGEINRPILGFDLASETTRAGVIERARATDRPAATPP
                     IQLLNTHRPNGGIMSFIPVTPSRKAEGGAPEPIAGYVLAAFETDAMIRNILATKLNLG
                     DMDLYIFAPGAQGQRLIYWQTASGWPARDDTSLLAAPHWQGTLELVDQQWSAIFVPSA
                     GSVPGMASWIAIAVLAGGLIATGSLVIWLWSSIRRTRHLEMLTINLRQTTEELQRNGA
                     QLTHLARHDALTGLPNRVAFREDIAGFLRRTRRGQSLAVLYLDLDRFKAVNDTLGHPV
                     GDSLLNEVADRLRGVVREVDTITRLGGDEFAIAQSGVEQPRSADTLAQRLIETLSQPY
                     DLGGQLVVVGASVGITLADHNDLDADQLLRRADIALYAAKRHGRGTWRWFEPAMDVEA
                     QLRRGLEMDLRDAIEHDRLELYYQPRISIEFGQVSGFEALLRWRHPSRGLLTPGDFMQ
                     CAEDTGLIVPVGAWALRTALCEAAHWPPGVRVAVNLSPRQLADDGLADMIEASLAASG
                     QTGARLELEITEIALVERHAAALATLKRLQACGVLITMDNYGTGYASLSHLRSFPFDR
                     IKIDQSFVGGMTDSPESTAIMRTILRLATDLGIATTAEGVETRAQLELLAANGCTEAQ
                     GYLFSPPQPAGEVSRLLAN"
BASE COUNT          600 a         1056 c         1073 g          671 t
ORIGIN      
        1 cgaggagacc ggccagcgtc cgccgtaaca acgcaaggtc gcacggccgc gacaaccggt
       61 gatcgccatc cttcaccagg atgatttcga catcttgcgc ggttagttgc tcggcggtgc
      121 gcaatgccat ctcccagggc acatccggat cggcctggcc atgtaacagc cgcaccttac
      181 agtcgagcag gatggggtcg tcgagcagca aatgctttcg cccgtcctcg atcagtgcgt
      241 gggtgatcgt cgtcggttcg ccgtactttc cgggaatttg cagcttcccg tcgcgcatca
      301 ctttcgcgcg ttcctcgaac gtcatcgcat cccacatcaa cttttcggtg aaatccggtg
      361 cagcggcgac gccgacgatg gcggcgaccc gctccggccg gcgcagcgcg gtgagcaagg
      421 cgagccagcc gcccatcgac gatccaacca gaatgacctg acccgaggtc aaccggtcga
      481 gcaccgtcag cgcgtccgca gcccattggc cgatcgtgcc gagttcgaac tgacccccgc
      541 tggtgccgtg gcccgaatag tcgaaccgca gcatggcctg accgcgcgcc gcgcagaatg
      601 ctgccagtgc cgtggctttc tcgccattca tgtcgctgcg gaaccctggc aggaacacca
      661 cagtcgggct ggcgccatcc agcctgcacc acgcgagttc gacgccatcg ccgcggtcaa
      721 gtcgtcccat ggtttccatt gtatgcctct ggtactggcc gcggttgcat cccgacagct
      781 gggtggaggc ttagcattgc cggcctcgac ggtggaactg caaacgcgaa cggttgttct
      841 gtcgcttgct ttccgaagcc tcgaattaac acatcgttaa tggatttctg gcatgacgtc
      901 attcctcaaa ggtcacgacc ggattggttc cggcgcaaag gatacaaatg tcttcgcacc
      961 tcgcaggtac ggctgggccg catcgcggcg cgcccggcga cgggggcacc gcggtccacg
     1021 cacgcgatgg cgaagccggg tcatatcgtc ggcgatgtat cgttctgctg ttggctggga
     1081 tcattggctc cggcatatcg atcggcatgt ttgcagccat cgatgggtgg gagacgcatg
     1141 tcgccgaact gcgtttcagc agcgacgcgc gtgaccgtct acgcaccatc aattcagggc
     1201 tggacgacgc gactgatttg ttgtggtcgc tgcgcgccta tcttgaaacg atgcgccacc
     1261 ccgtcagtcg ttccgaatac atgacgttct cttccgcttt gcgcagccgg gtggtcggat
     1321 tgcgggatac cggttgggcg cctcgtgtca ccgccgccgg gcgcgaaacg tttgagcgtg
     1381 atgttcgggc caccggcctg cccgattttc agatcgtcga gcggggtgct gacggcaagc
     1441 tggtccgcgc agcggatcgc gccgaatact tcccggtact ttattccgat cccggcgaga
     1501 tcaaccgacc catcctcggt tttgatctcg cgtccgaaac cacccgtgcc ggcgttatcg
     1561 aacgtgcacg tgcaaccgat cggccggcag ccacgccgcc gatccagttg ctgaacacgc
     1621 acaggcccaa tggcgggata atgagtttta ttccggtcac cccatcgcgc aaggcagaag
     1681 gcggcgcgcc ggagccaatt gccggatacg tactcgccgc attcgaaacc gacgccatga
     1741 tccggaacat cctcgccacc aaactcaatc tgggcgacat ggatctgtac atctttgctc
     1801 ctggggcgca gggccagcgt ctgatttact ggcaaaccgc ctccgggtgg ccggcgcgcg
     1861 atgacacatc attgctcgct gcgccgcatt ggcagggcac gctggaactt gtcgatcagc
     1921 aatggagcgc gatctttgtc ccttcggccg gatcggttcc gggcatggcg agttggatag
     1981 cgatcgccgt gctggccggc ggactgatcg cgacggggtc gctggttatc tggctctggt
     2041 cttctatacg tcgcacccgg catttggaga tgttgacgat caatctccgc caaaccaccg
     2101 aggaactgca gcgtaacgga gcgcagctca ctcacctggc gcggcatgac gcattgaccg
     2161 gtttgccgaa ccgcgtggcg ttccgcgaag acatcgccgg ctttttgcgc cggacgcgcc
     2221 gcggacaaag tctggcagtg ctgtacctgg acctcgaccg gttcaaggcg gtgaacgata
     2281 cgcttggtca tccggtcggc gacagtctgt tgaacgaagt ggcagaccgc ctgcgcggcg
     2341 tggtgcgcga ggtcgatacc atcacgcggc ttggcggtga cgagttcgcg atcgcacagt
     2401 ccggtgtcga gcagccgcgc tcggccgaca ctctggcgca acgtctgatc gagacgttga
     2461 gccaacccta tgaccttggc ggccagctgg tggtggtcgg tgcctctgtc ggcatcacgt
     2521 tggcagatca taacgatctg gatgccgacc aattgctacg gcgggccgat atagcgctct
     2581 atgcagcgaa acgtcatggg cggggtacct ggcgctggtt tgaaccggcc atggatgtgg
     2641 aagcccagtt gcgccggggc ctggagatgg acctgcgtga tgcgatcgaa catgacaggc
     2701 tggaattgta ttatcagccg cggatcagca ttgaattcgg tcaggtcagc ggctttgagg
     2761 cgttgttgcg atggcgccac ccgagccgcg gtctgctgac ccccggggat ttcatgcaat
     2821 gtgccgagga taccggcctg attgtcccgg tcggggcctg ggcgctccgt accgcgctct
     2881 gcgaggccgc gcattggccc cccggtgtac gggtcgcggt caacctgtcg ccgcgacagc
     2941 tggcggacga tggcctggcg gatatgatcg aggcatcgct tgccgcgtcg ggccaaaccg
     3001 gtgccaggct ggaactggaa atcacggaaa ttgcgctggt ggagcgacat gccgcggccc
     3061 ttgcgacact caaacgattg caggcctgcg gtgtgctgat cacgatggat aattacggta
     3121 ccggctatgc gtcgctcagc catctgcgga gttttccgtt cgatcgcatc aagatcgacc
     3181 agtctttcgt tggcggcatg acggattcgc ccgaaagtac cgccatcatg cggaccattt
     3241 tgcggctcgc gaccgatctg ggcattgcga ccacggccga aggggtcgag acgcgggccc
     3301 agcttgagct gctggccgcc aacggttgca ccgaggcgca gggctacctg ttcagcccgc
     3361 cgcagccagc cggcgaagta agccgcctgt tggccaattg
//
LOCUS       DATAVD010000579         1661 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1544296, whole genome shotgun sequence.
ACCESSION   DATAVD010000579 DATAVD010000000
VERSION     DATAVD010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1544296"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..1254
                     /locus_tag="VHX39_10760"
     CDS             106..1254
                     /locus_tag="VHX39_10760"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016041.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HEX3991638.1"
                     /translation="MSETNTRPVQSPRPKIGEGRIGSFLCAAIGLLSVAAVLCLRFPA
                     FLTTPELRPHYDVELLRLVLAVAMVVAAGLGVLSIALGGPRLRAAIGLSALFLAMLLG
                     GPYVASADFAQPRFYLGLDWLVLDLFFTGAAFVFLEWVFPQVRPEQPPLREGWQLDLG
                     YFGINHLAIGIFLVTSAHFAHDAFAWAVNAKVQSFVLAMPAVLRFVLVVLAADAVEYA
                     SHRAYHEVPWLWRIHAIHHSPQTMDWLSGSRLHFLEPLVTRAFVLVPIFLLGFPQDTI
                     FAYVIFISVQSVVIHSNIKMNAGWLRYVIVTTQFHHWHHASDAEAIDKNYTAHTPLFD
                     LLFGTWHLPKDRWPVNYGTVKPVPGGMIGQFLHPITGPVSAFLEHRTK"
     gene            1416..>1661
                     /locus_tag="VHX39_10765"
     CDS             1416..>1661
                     /locus_tag="VHX39_10765"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003953 - NAD+ nucleosidase activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HEX3991639.1"
                     /translation="MAAKVFISHSSVDAWVARQIGQTIQALGASIFLDETEIAAGDDF
                     MERILNTEPGCSELLVLLTPWGIKRPYVLFEISCFRHS"
BASE COUNT          281 a          454 c          527 g          399 t
ORIGIN      
        1 ggtgttacga tcgcaaatcg cgctgatggt cggcgcgatc gctcgcgggc taccgtcggt
       61 cgaagatcca gcgtaacatc tttccaatga gacaggttga atcgtatgtc tgaaacaaac
      121 acgcgcccgg tgcagagccc aaggccaaag atcggcgagg gccggatcgg gagtttcctc
      181 tgcgccgcga tcggtttgct cagcgttgcc gctgtacttt gtctgcgttt cccggccttt
      241 ttgacaacgc cggaactgcg gccgcattac gacgtggaac tgttgcggtt ggtgcttgct
      301 gtggcgatgg tggttgcggc cggccttggc gtgctgtcga tcgcgcttgg tgggccgcgt
      361 ttgcgcgccg cgattggatt gagcgctctg tttctggcga tgcttctggg tgggccgtat
      421 gtcgcctctg cggatttcgc ccagcccaga ttttatctgg ggctggactg gctggtgctg
      481 gatctgttct ttaccggcgc agccttcgtg tttctggagt gggtgttccc gcaggtgcgg
      541 cccgagcaac cgccgctgcg tgaaggctgg caactcgatc tcggttattt cggcatcaac
      601 cacctggcga tcgggatatt cctcgtcact tcagcccatt tcgctcatga cgccttcgcc
      661 tgggcggtaa acgcaaaggt gcagagtttc gtgctggcga tgccggcggt gctgcgcttc
      721 gtgctggtcg ttttggcggc ggacgcggtg gagtatgcct cgcaccgggc ctatcacgag
      781 gtgccgtggt tgtggcgcat ccatgccatc catcattcgc cacaaaccat ggattggttg
      841 tcaggctcgc ggctgcattt cctggaaccg ctggtgacgc gggcgtttgt gctggtgccg
      901 atctttctgc tggggtttcc gcaggatacg atctttgcct acgtgatttt catcagcgtg
      961 cagtcggtgg tgatccattc gaatatcaag atgaatgcgg ggtggttgcg gtatgtgatc
     1021 gtgacgacgc agtttcatca ttggcatcac gcgtcggatg cggaggcgat cgacaagaat
     1081 tacacggcgc acacgccgct gtttgatctg ctgttcggca cgtggcattt gccgaaggac
     1141 cgctggccgg tgaattatgg cacggtcaag ccggttccgg gtgggatgat cggacagttt
     1201 ctgcatccga tcaccgggcc ggtgtcggcg tttctggaac atcgaacgaa atgaaagaac
     1261 cgcgcccgcg atgcccgagg gagcagtccg gacggctctt agccggaacc tgcggcggcg
     1321 aaacgtcgta ggcaacggcg gaagtcctgg acctaattcc gtccaactat aactattggt
     1381 tgcctttggc cccctgcctg ggcactctgc ccggcatggc cgccaaggtg ttcatctcgc
     1441 actcgtctgt cgatgcgtgg gtcgcacgcc aaattggtca gacaatacaa gcgcttggag
     1501 cgtcgatatt cctcgatgaa acagaaatcg ccgctggcga cgacttcatg gagagaattc
     1561 tcaacacaga acctggctgc tcggaactgc tggttctgct gacaccgtgg ggaatcaagc
     1621 gcccgtacgt gttattcgaa atcagttgct ttcggcacag c
//
LOCUS       DATAVD010000580         2634 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3031170, whole genome shotgun sequence.
ACCESSION   DATAVD010000580 DATAVD010000000
VERSION     DATAVD010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2634
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3031170"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1514
                     /locus_tag="VHX39_10770"
     CDS             <1..1514
                     /locus_tag="VHX39_10770"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3991640.1"
                     /translation="LTDCIAAFARQDKRITALTLPANQGISGATNAAIAQATGRYVAL
                     FDHDDLLAERALEFMLAAALRTGALLLYSDEDKIDDNGTFSEVNLKPDWNYRLLLAQN
                     YVCHLLMVERTQLRKAGAFRSECDGAQDHDIILRLSEIIPPDKIEHVPEVLYHWRKTP
                     ASTAASGQAKTYTVDAGIRAIQDHLDRKGLTGRAHSPRAITCYEIDWTLPREPSVTII
                     IPYREHIDMTRDCVNALQAHTDYADYRIILIDNWSTSDAALAFAAEMKDRENVMILRV
                     QEPFNFSRLNNLAVAQSDSELLLFMNNDVFVSDPTWLRVMVGELLADPLVAIVGNKLL
                     YPSGLVQHGGVVLGVGGIADHAHKGLTANDPGYAARAICAQQMSAVTAACMLCRRTAF
                     DAVHGFDERELQVAFNDIDLCLKVQQAGFRVIWTPGSVAEHRESLSRGDDMRPDQQAR
                     FFHENETMTARWNKVIAADRFYHRAFSRQSGMFRDLGLSLSADFDTAQLPRVS"
     gene            1651..2586
                     /locus_tag="VHX39_10775"
     CDS             1651..2586
                     /locus_tag="VHX39_10775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991641.1"
                     /translation="MGIGYALWHTTANWETNSPKAPWGHPELGNYVSSDRSVMQQHAR
                     WLADAGVDFVLLDWSNDLDTDTRDQHGPPDKLFIENTTPLLFATFAGVHPHPRIAFLV
                     GYSGNALRDAAKQHNENIDIDAVLGGKLGAKCDQVYQQYVQHKLFGPMLETYLGKPLL
                     LVYLGVPCPFQTRAPTWTDPRFTVRFMTAYLAQQPSLLGPGGVSRFGYWSWEERRLQS
                     YTVFDGHPEAMTAVAAWRGSGTPGRANGDTFRANWARARQVGPRFVLAGTFNEWWQAE
                     QPTAEGSKDIEPSREFGDRYLQILREQATLFKAGK"
BASE COUNT          543 a          801 c          774 g          516 t
ORIGIN      
        1 agctgaccga ctgcatcgcc gccttcgcgc ggcaggacaa gcgcatcacg gcgctgaccc
       61 tgccggccaa ccagggcatc agcggcgcca ccaacgccgc catcgcccag gccaccggcc
      121 gctacgtcgc gctgttcgac catgacgacc tgctggccga gcgcgcgctc gaattcatgc
      181 tggccgcagc actgcgtacc ggcgcgctgc tgctctacag cgacgaggac aagatcgacg
      241 acaacggcac attctcggag gtgaacctta agccggattg gaattatcgg ctgctgctgg
      301 ctcagaacta cgtatgccat ctgctgatgg tcgagcggac gcaactccgc aaagccggcg
      361 catttcggtc ggagtgcgac ggcgcgcagg accacgacat catcctgcgc ctctcggaga
      421 tcattccgcc cgacaaaatc gagcacgtgc cggaagtact ttaccattgg cgtaagacac
      481 cggcgtccac cgccgcctca ggtcaggcca agacctacac tgtggatgcc ggcatccggg
      541 cgatccagga tcatctggac cgcaaggggc tgaccggacg ggctcactcc ccgcgcgcaa
      601 tcacttgcta cgagatcgac tggactctgc ctcgagagcc ctccgttacg attatcattc
      661 cgtatcgtga gcacatcgac atgacgcgcg actgcgtcaa cgcattgcag gcgcataccg
      721 attatgccga ctatcggatc atcctgatcg acaattggtc gacctccgac gcagcgcttg
      781 cgttcgcggc ggagatgaag gaccgagaaa acgtgatgat cctgcgggtc caggaaccgt
      841 tcaatttctc cagattgaac aatcttgctg tggcgcaaag cgacagcgag ttgctgctgt
      901 ttatgaacaa tgacgtgttc gtctcagatc caacgtggct gcgtgtcatg gtgggggaat
      961 tgcttgccga tcccctcgtg gcaattgtcg gcaacaaatt gctctatccc agcggcctgg
     1021 tacagcatgg cggcgtcgta ttgggcgttg gaggcatcgc cgatcatgcc cataaggggc
     1081 tgacggcaaa cgacccgggt tatgccgctc gcgccatttg cgctcagcag atgtccgcgg
     1141 tgaccgcagc ctgcatgtta tgtcgccgca ccgcgttcga cgcggttcat ggtttcgacg
     1201 agcgagagct tcaggtcgcg ttcaacgata tagacctttg cctgaaggtt cagcaggcag
     1261 gattccgggt catatggacc ccaggatcgg tggcagagca tcgagagagt ctaagccgtg
     1321 gcgatgacat gcgacctgat cagcaagctc ggttctttca tgagaacgag accatgaccg
     1381 cgagatggaa caaagtcata gcggcggacc ggttttacca ccgcgctttt tcgaggcaat
     1441 ccgggatgtt tcgtgatctc ggcctctcgt tgtccgcaga cttcgacact gcgcaactcc
     1501 cccgtgtttc gtgaggcata aacattgtcg tcaatgcttt cccgacgtgc gacgctggct
     1561 cttggaagcg gattggcaac cagcaacgcc agtgcgcagg acgcggcttt gcccgctggc
     1621 gtgacaccaa cgcccgcagg tgagcggcgc gtgggcatcg gctacgcgct ctggcacacg
     1681 accgccaatt gggaaacaaa ttccccaaag gcgccgtggg gacatcccga actgggtaac
     1741 tacgtgtcga gcgatcgctc cgtcatgcaa cagcacgcgc gctggctcgc ggatgccggc
     1801 gttgactttg tgctgttgga ttggtcgaac gacctcgaca cggacacacg ggatcagcac
     1861 ggcccccccg acaagctgtt catcgagaac acgacaccct tgcttttcgc aaccttcgcg
     1921 ggggttcacc cgcaccccag gattgcattt ctggtcggct attcgggtaa tgccctgcgc
     1981 gatgcggcga agcagcacaa cgagaatatc gatatcgatg cggttctcgg cggcaaattg
     2041 ggcgccaaat gcgatcaggt ctaccagcaa tacgttcagc acaaactgtt cgggccaatg
     2101 ctggagacct acctcgggaa gccattgcta ttggtttact taggcgtccc ctgccctttt
     2161 caaacgaggg cccccacatg gacagacccg cgcttcacgg ttcggttcat gaccgcttat
     2221 ctggcgcagc agccgtctct gcttggacca ggcggcgtca gcagattcgg ctactggagt
     2281 tgggaagaac ggcgtttgca aagttacaca gtttttgatg gccatcccga ggcaatgacc
     2341 gccgtcgcgg cctggcgagg atccggcacc cctggtcgtg ccaacggcga tacgttccgc
     2401 gcgaactggg ccagagcccg tcaggttggc ccacgtttcg tgctcgccgg cactttcaac
     2461 gaatggtggc aggcagagca accgactgcg gaaggcagca aagacatcga accctcccgc
     2521 gagttcggcg accgctactt acaaattctt cgcgaacagg cgaccctgtt caaagctggg
     2581 aagtagcgaa ttcgaaaggg gttgtcgagc aggatcggct gacatctttt gcga
//
LOCUS       DATAVD010000581         3471 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1356521, whole genome shotgun sequence.
ACCESSION   DATAVD010000581 DATAVD010000000
VERSION     DATAVD010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3471
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1356521"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1456)
                     /locus_tag="VHX39_10780"
     CDS             complement(<1..1456)
                     /locus_tag="VHX39_10780"
                     /inference="COORDINATES: protein motif:HMM:NF007126.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NirA family protein"
                     /protein_id="HEX3991642.1"
                     /translation="MSDAGFSTEQQEYLKGFMTGVETRRAALGLPFAPVNNATPADAG
                     DLQRAAQDRTVAAGGRLTPEEEAKRKKHPLDRYDEIAAGAMEKRFPKGTDIFLTKFHG
                     LFYVAPAQDAFMCRLRIPGGIINAFQLRGVAAIADELAGGFADITTRANLQLREIPAA
                     NAPEVLLRLAEIGLTSRGAGADNLRNITGSPTAGIDPQELLDTRPDTRALHHFILYHR
                     ELYGLPRKFNIAFDGGGRVAVLEDTNDIALTAVSIADKFGVTPGVYYRLGLGGITGHR
                     DFARDTGVIVPPRDAVRVCNAIIRVFIGHGDRTDRTKARLKYLLDRWGLPKFLEAIEA
                     ELGEPLTRIDDAAILPRPPVQKHGHIGVHEQKQPGLYYVGILCPVGRLGSEQLRGLAS
                     IAERFGSGTIRLTVWQNCLISDIAEAQLAQALAAIEALGLDWRSSAIRGGLVACTGNT
                     GCKFSAANTKRDASMLAAFLERHITIDHPINIHLT"
     gene            complement(1456..2289)
                     /locus_tag="VHX39_10785"
     CDS             complement(1456..2289)
                     /locus_tag="VHX39_10785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015499 - formate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015724 - formate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HEX3991643.1"
                     /translation="MDSLKPGEITENMVEAGIAKAALGPFDLLVRGALSGALLGFATS
                     LAVGAAVQTGQLLVGALIFPVGFVMIVLLGLELVTGSFALLPLAWLRGRASLGTVLAN
                     WSWVFVGNLLGSVFYAVLLVIALTDAGQIEPAGIAARIVQLAEAKTIGYAHFGAAGML
                     TVFVKAILCNWMVCLGVVMAMSSTSTIGRIAGAWMPILVFFAQGFEHSVVNMFIIPAG
                     MMMGAKVSFADWWLWNQIPVTLGNLVGGLVFTGLALYVTYGRAPAEPVAPSVGIGQPA
                     E"
     gene            complement(2983..>3471)
                     /locus_tag="VHX39_10790"
     CDS             complement(2983..>3471)
                     /locus_tag="VHX39_10790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991644.1"
                     /translation="NSNLVHLERYQARPIGIRRTTEVPPAKVTRAGPTSPPAAAAQTP
                     AGPEAAMPPAELQVTPAQSMQAATVGSAAQKEFDWLVENDPEARMEYQPSPEMVDACL
                     TNPEAMAAMAAGDPQRWANALGIAAPSAAFLEAATTPGSPFDRTAHGPWPVAAGVGPR
                     KG"
BASE COUNT          712 a         1077 c         1042 g          640 t
ORIGIN      
        1 cggtcagatg aatgttgatc ggatgatcga tcgttatgtg ccgctccaga aacgccgcca
       61 gcatggaagc gtcgcgcttg gtattggcgg cggaaaattt gcatcccgtg ttgccggtgc
      121 aggccaccag cccgccgcgg atcgcgctgc tccgccaatc caggccaagc gcctcgatcg
      181 ccgccagcgc ctgggctaat tgtgcctcgg cgatatcgct gatcaggcaa ttctgccaaa
      241 cggtcagccg aattgttccg gaaccgaacc gctcggcgat cgaggcaagg ccgcgcaatt
      301 gttcgctgcc aagacgaccg accggacata ggatgccaac gtaatacagg ccaggttgct
      361 tctgttcgtg cacgccgata tggccatgct tttgcacagg cggccgcggc aagatcgctg
      421 catcgtcgat ccgcgtcaac ggctcgccaa gctctgcttc gatggcctca aggaacttcg
      481 gcaggcccca ccgatccagc aaatacttca aacgcgcctt ggtgcggtcg gtgcgatcgc
      541 cgtggccgat gaacacccgg atgatggcat tgcacacgcg caccgcatcg cgtggtggca
      601 cgatcacgcc ggtgtcacga gcaaagtcac gatgcccggt gataccgccc aagcccagtc
      661 gatagtacac acctggggtt acgccgaatt tatccgctat cgaaacggcc gtcaaagcaa
      721 tgtcgttggt gtcttcgagc accgcaaccc ggccgccgcc gtcgaatgcg atgttgaact
      781 tgcgcggcag accgtaaagt tcccgatgat acagaatgaa gtgatgcagc gctcgcgtgt
      841 ccggcctggt atcgagcaac tcctgcggat cgatccctgc cgtcggactg ccggtgatat
      901 ttcgaagatt gtcggcgccc gcgcctcgcg aggtcaggcc gatttcagcc agccggagca
      961 acacctcggg cgcattcgcc gccggtattt cccgaagttg caggttggcc cgcgtggtga
     1021 tgtcggcgaa accaccggcc agctcgtcgg caatggcggc gacaccgcgc aactgaaacg
     1081 cattgatgat gccgcccggg atccgcagcc ggcacatgaa cgcatcctgc gccggcgcca
     1141 cgtaaaacag accgtggaac ttggtcagga aaatatcggt gcccttgggg aatcttttct
     1201 ccattgcacc ggccgcaatc tcatcgtaac gatccagcgg atgctttttg cgtttggctt
     1261 cctcctccgg cgtcaacctg ccaccggccg cgacggtccg atcctgtgcg gcacgttgca
     1321 gatcaccggc atcggccggc gtcgcgttat taaccggcgc aaacggcagg ccaagtgccg
     1381 cgcgcctggt ctcgacgccg gtcataaacc ctttcagata ctcctgttgc tcggtcgaga
     1441 acccggcgtc gctcattatt cggccggttg tccgatgccg accgaaggtg cgactggctc
     1501 cgccggggca cggccataag tgacgtataa cgcaaggccg gtgaacacca ggccgccgac
     1561 gagattgcca agcgtgaccg ggatctggtt ccacaaccac cagtcggcaa agctgacttt
     1621 ggcgcccatc atcatgcccg ccggaatgat gaacatgttc accaccgagt gctcgaaccc
     1681 ttgtgcgaag aacaccagga tcggcatcca tgcgccggcg atgcggccga tggtcgaggt
     1741 ggaactcatc gccatcacga ccccgaggca gaccatccaa ttgcacaata tggccttgac
     1801 gaagacggtc agcatgccgg cggcgccgaa atgagcataa ccgatggtct ttgcctcggc
     1861 gagttgcacg atgcgcgcgg caatcccggc cggttcgatc tggccggcgt cggtcagcgc
     1921 gatcaccagc aacaccgcat agaacacgct gcccagaaga ttgccgacga agacccagga
     1981 ccagttggcc aggacggtgc cgagactggc gcggcccctc agccaggcga gcggcaatag
     2041 tgcaaaactg ccggtcacca actccaggcc cagaagcacg atcatgacga agccgaccgg
     2101 gaagatcagc gctccgacca gcagttgccc ggtctgcacg gcggctccaa ctgcgaggct
     2161 ggtggcaaag cccagtagcg cacctgagag agcaccgcgg acgagcaggt caaaggggcc
     2221 caatgcggct ttcgcgatgc cggcctcgac catgttttcg gtaatttcgc ccggcttcag
     2281 ggaatccatg gtttttgtcc tccgtcatct gattgcgacg caaacctcgt gccaacggaa
     2341 gtgatgccaa agacggcatt tggcaaaata tccgacggga tatgcgcaat caacaggctt
     2401 atcagatcaa tagtacgcca aatattaatg cgcaattagg cgtcaatagg ctcgcgcaca
     2461 cccggcttgc gtcgattgct caggaactgc tcaggccaat tgtcgagcgt ttggcgccag
     2521 gtgctggcgg ggggcgtagc cgatcagcag agaaggggcc catcctaagt catatcgaaa
     2581 tgtcattgca acccattgat aataaaagat caatctaacg cctggaggtt tgtctttcgg
     2641 caaggcatcc agaacggccc actgagtgac actacgggac ttccaagcta atgcgtcgtc
     2701 tcagcgtggc aggaaccacg caggcgctga tccctatctc gtcggtcaat cgaaagcgtt
     2761 cgaagtgggc gatcgcagcc gattgtgccg tcaccacggc aggattcatt tcagagcgac
     2821 agaggtgcag agcaacagag aagtaaaacc cggggcgcgc tgactatact gtggattcgc
     2881 caggttaatt ctgttcatac ccgtcaaagc atggcgcggt cgcgtacgcc tggcggcggg
     2941 cagcgtgcga tcataacgca ccggcggggt aggggccgag attcagccct tccgcgggcc
     3001 gacaccagct gcaaccggcc aaggaccatg cgcagttcga tcgaacggac tgcccggtgt
     3061 ggtggccgcc tccagaaacg cggcgctcgg ggcggcaatg cccagtgcat ttgcccaacg
     3121 ctgggggtcg ccggctgcca tggcagccat cgcctcggga ttggtcaggc aggcatcgac
     3181 catctcaggc gagggctggt attccatcct ggcctcgggg tcgttctcaa ccagccagtc
     3241 gaattctttc tgtgctgccg atccgaccgt ggcagcttgc atggattggg ctggcgtaac
     3301 ctgcagctcg gccggtggca ttgccgcttc cggcccagcc ggtgtctgcg ccgcagcggc
     3361 cggaggactc gtcggaccag ctctcgtcac cttggccggc ggaacctccg tggttcgcct
     3421 gattccaatc gggcgagcct gatagcgctc cagatgcacg aggttgctgt t
//
LOCUS       DATAVD010000582         5766 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_802525, whole genome shotgun sequence.
ACCESSION   DATAVD010000582 DATAVD010000000
VERSION     DATAVD010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5766
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_802525"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..648
                     /locus_tag="VHX39_10795"
     CDS             <1..648
                     /locus_tag="VHX39_10795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991645.1"
                     /translation="MAGRRGLGALGFQFLSADAAFAWVHAYYNAFTKRQEKLCDYQTN
                     PNIALVSYFMCAATDEEARRRAEGATFFQFALRFFGASSGRKRPDPYTVNIWDEYNNW
                     KAANPEAAARAISGGLIGSPDTIRRKLRRFRSSNIDQVILLNQAGRNTHEHICESLEL
                     FARDVMPEFHADEPAHQEWKRKVLAREIELEEIDTQPFRDRFGPNSVQPAQAAAE"
     gene            650..1672
                     /locus_tag="VHX39_10800"
     CDS             650..1672
                     /locus_tag="VHX39_10800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3991646.1"
                     /translation="MDPLARRKLGRTEVEVTQLGLGGAGLGDLFDIVEDRDADATLKA
                     AWDAGIRYYDTSPWYGRGQSEHRFGRALYRRPRADYVLSTKVGRLFRAVHDAEHFEHG
                     FWRGGLTFRHQFDYSYDGVMRSFEDSLQRLGLPGIDLLLIHDLDLAHHGSDVSVSAHL
                     TELHNGGWRALTALKDAGLIRGVGAGINQREMIPRLLDLLDLDFFLVALPYTLLDTGV
                     LDSEFPLCVARGVGFVIGAPFASGILATGAVQGARYRYAETTPEIMAKVKRIEAVCDR
                     HAVPLKAAALQFPLGHPSVAAVIPGALLPQHVTGNVAAFRHAIPAAFWAELKSEGLLR
                     EDAPVP"
     gene            complement(1669..2754)
                     /locus_tag="VHX39_10805"
     CDS             complement(1669..2754)
                     /locus_tag="VHX39_10805"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3991647.1"
                     /translation="MLFSCLPEGARIPGRFPGPAHARGKWFTIDIHCHVNSAKAAAMV
                     EGNEAVSRWYLETQAGPGSQAINRQNGVRTRQQGSSAEQRIADMDLMGIDIQAISPSP
                     RQTFYGADPDLGLAVSRVINDNIADIVGRFPDRFTGLGTIPLQAPEFAIAELERLHGS
                     LGMRGIEIMTHVAGEDLSADRFRPIFRRIEELGMLVFMHPDGFTEAQRFKDHYFANVI
                     GNPLDTTVALHHLIFGGVLEDCPGLKLVAAHGGGYLPSYSGRIDHAASARPDTGEKLK
                     EMPGVYLRRLYFDALVYTHSQLEYLVNEFGADHILVGTDYPADMGETDPIGFIEGAPG
                     LDDATRRAILGGNAARLLGIEVPGGKG"
     gene            complement(2785..4107)
                     /locus_tag="VHX39_10810"
     CDS             complement(2785..4107)
                     /locus_tag="VHX39_10810"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX3991648.1"
                     /translation="MRPSEPFRLAQAWRLLTLGSGLFNRVPDGVILAADIQCLIKGMP
                     DMSSGALPVCQPEDVGLSSAALARLGSALQDRIAAGHLPGAVALVARHGKVAWFEAIG
                     RQDPASGTPMRTDSIFRIYSMTKPLVSVGVMMLWEEGRLLLNDPIEKYLPAFAQPKVG
                     VVEGDTLRLVPAHRSITVQDLLRHTSGLTYEFRGTTLVHKAYIDARTSRLRQTNEEQV
                     ATLGGLPLLHQPGTQWEYSRSTDVLGRLIEVISGQSLGSFLAERICGPLGMTDAGFSV
                     AEPQHGRIAEAFAKDPDTGADVALLDVKRTAIFESGGGGMVATTMDYARFCAMLLHNG
                     RFDGAQFLGRKTLEFMTADHLGSIPRNSESVPPGHGFGLGFAVRTAVGMAPFPGSVGS
                     YYWSGAAGTWFWVDPAERLFAVLMIQAPGQREHYRLLFRDLVYAAIAD"
     gene            4113..4922
                     /locus_tag="VHX39_10815"
     CDS             4113..4922
                     /locus_tag="VHX39_10815"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046417 - chorismate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEX3991649.1"
                     /translation="MPDTTPTPAQKAKAPPPEDGWRPDLLALRARLDELDNQIHDLLI
                     DRAQVVESVARSGKQSAFRPGREAAILRRLLARHTGKLPPQTLVRMWRELLAGTTAMQ
                     SAVTIAVFDPASDGTLPALAREHFGFLTPAIVHQSPATALQAVRDGMASVAVLPFPTA
                     ATAWWAALTDGMPRLHIIARLPFWGSRRPGVPQSDALVVGIAAPDASGSDRSFIATQD
                     RALLADAGLVLHATHGMVAEVEGMVADDDPRLPSGAMVLGGYAVPVAGEPA"
     gene            4919..>5766
                     /locus_tag="VHX39_10820"
     CDS             4919..>5766
                     /locus_tag="VHX39_10820"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEX3991650.1"
                     /translation="MTAPAPRPEILTISPYVGGEATVAGVNRSYKLSSNEGAFGVPPL
                     AQKALREAVADMFRYPDGGADRLREAIGKRWGLDPARIVCGAGSDDLLYQLCLAYGGP
                     GRDIIMSEHGFTIYFIAGTYAGSRVIKVPERNLQPDLDAMLAAVSPSTRAVFIANPNN
                     PTGAMITSAEMTRFRAALPPEVLLVIDSAYAEYITRDDYNAGEQLVDATDNTVMTRTF
                     SKVFGLGGIRLGWCYGPPGVIDVLNRIRGSFNVSVAAQVAGIAALQEKGWVEKGCAHN
                     AEWRPR"
BASE COUNT         1093 a         1915 c         1707 g         1051 t
ORIGIN      
        1 atggccggcc gtcgcgggct cggcgctctg ggctttcagt tcctgtcggc tgacgcagcg
       61 tttgcctggg tgcacgctta ctacaacgcg ttcaccaaac ggcaggaaaa actgtgcgat
      121 tatcagacca atcccaatat cgcactggtg tcgtatttca tgtgcgcggc gaccgatgag
      181 gaagcccgcc gccgtgccga gggtgcgacc ttcttccagt tcgcgctgcg gtttttcggc
      241 gcctcgtccg ggcgtaagcg gcccgatcct tacacggtca acatctggga cgaatacaac
      301 aactggaagg ctgccaatcc ggaagctgcc gctcgcgcga tatccggcgg gctgatcggc
      361 tcacccgaca cgatccgccg gaaattgcgc cggttccgct cgtcgaacat cgaccaggtc
      421 attctgctga accaggccgg ccgcaacacc catgaacaca tttgcgaaag cctggaattg
      481 ttcgctcggg acgtcatgcc ggaattccat gccgacgaac ccgcacacca ggaatggaaa
      541 cgcaaagtgc tggcccgcga aatcgaactg gaggagatcg acacccagcc gttccgcgac
      601 cgcttcggcc ccaattccgt gcaaccggca caggctgcag cggagtaacg tggatccgct
      661 cgcccgccgc aaacttggcc gaaccgaggt agaggtcacc caacttggcc tcggcggcgc
      721 cgggttgggc gacctgttcg atatcgtcga ggaccgcgac gccgacgcca cgttaaaagc
      781 cgcatgggac gccggaatcc gttactacga cacgtcaccg tggtacggcc gcggccagag
      841 cgaacaccgc tttggccgcg cgctgtatcg ccggccgcgc gccgactacg tgttgtccac
      901 caaggtcggc cgcttgtttc gcgccgtgca tgacgcagaa catttcgaac acggcttctg
      961 gcgcggcggg ctgacgttcc ggcaccaatt cgattacagc tacgatggag tgatgcgcag
     1021 ctttgaggac agcctgcaac gcctcggcct gccaggcatc gatctgctgc tgatccacga
     1081 cctcgatctt gcccaccacg gctctgacgt gagcgtgagc gctcatctga ccgaactgca
     1141 caacggcggc tggcgtgcgc tgacggcgtt gaaggacgcc ggactgatcc gcggcgttgg
     1201 cgccgggatc aaccagcgcg aaatgattcc gcggttgctg gacttgctgg atctggattt
     1261 cttcctcgtg gcgctgcctt acacattgct ggataccggc gtgctggaca gcgaattccc
     1321 gttatgcgtg gcgcgcggtg tcgggttcgt gatcggtgcg ccttttgcgt ctggcattct
     1381 ggcgaccggc gccgtgcaag gcgcacgtta ccgttacgcc gaaacaacac cggaaatcat
     1441 ggccaaagtg aaacggatcg aggcggtgtg cgaccgtcac gcagtgccgt tgaaggctgc
     1501 cgcgttgcaa tttccgttgg gccatccctc ggtggccgca gtgatcccgg gcgcgttgtt
     1561 gccccagcac gtaaccggca acgtcgccgc gttccggcac gcaatcccgg ccgcattttg
     1621 ggcggaattg aagtccgagg ggttgctgcg cgaggacgcg ccggtgcctt aacccttccc
     1681 ccccggcacc tcgatcccca acaaccgcgc cgcattgcca cccaatatgg cccgccgtgt
     1741 cgcatcatcc agtcccggcg caccttcaat aaatccgatc gggtcggttt cgcccatatc
     1801 cgccgggtaa tccgtaccaa ccagaatatg atcggcgcca aactcgttca ccaggtattc
     1861 cagttgcgaa tgggtgtaca ccagcgcatc gaaatacagc cgccgcagat atacgcccgg
     1921 catttccttc aacttctccc cggtatccgg ccgagccgat gccgcatgat cgatccgtcc
     1981 ggagtaactc ggcaggtacc ctccgccatg cgccgccacc agcttcaatc ctgggcaatc
     2041 ctccagcacg ccaccaaaaa tcagatgatg cagcgccacc gtggtatcca gcggattgcc
     2101 gatcacgttg gcgaagtaat ggtccttgaa ccgctgtgct tccgtaaaac cgtccgggtg
     2161 catgaacacc agcatgccga gttcctcgat ccgccggaat atcgggcgga accggtccgc
     2221 cgacaaatcc tcgccggcga catgcgtcat gatctcgatc cctcgcatcc cgagcgatcc
     2281 gtgcaaccgt tccagttcgg caatggcaaa ttccggcgcc tgcagcggga tggtgccaag
     2341 gccggtgaac cgatccggaa agcggccgac gatatcagcg atattgtcgt taatcacccg
     2401 agacacggcc aggccaagat ccggatcggc accataaaac gtctgtcgcg gcgacggaga
     2461 tatcgcctga atatcgatcc ccatcaggtc catatcggcg atccgctgtt ccgccgagct
     2521 accctgctgg cgggtcctca caccgttctg ccgattgatt gcctggctcc ctgggcctgc
     2581 ctgagtttcc aaataccagc gcgagaccgc ttcgttaccc tcgaccatcg ccgcggcctt
     2641 ggcactgttc acatggcaat gaatgtcgat ggtgaaccat ttgccgcggg catgggcggg
     2701 tccgggaaag cggccgggaa tacgggcacc ttcaggcaga caactgaaca gcataggact
     2761 tcctccttga tacttattgg acaatcaatc ggcgatcgcc gcgtacacca gatcgcggaa
     2821 cagcagccgg taatgttcgc gttgtcccgg cgcctggatc atcagtacgg cgaacagccg
     2881 ctcagccgga tcgacccaga accacgtgcc ggccgcgccg ctccagtaat aactgccgac
     2941 cgagcccggg aacggcgcca tccccactgc ggtgcgcacg gcaaatccca gtccaaagcc
     3001 atgaccaggc ggcaccgatt ccgagttgcg ggggatcgag cccagatgat cggccgtcat
     3061 gaattcgagc gtcttgcggc caaggaactg cgcaccgtca aaccgcccgt tgtgcaacag
     3121 catggcgcag aaccgggcat aatccatcgt cgtcgcgacc atgccaccac cgcccgactc
     3181 aaagatcgcg gttcgtttca catccagtaa cgccacgtca gccccggtat ccgggtcctt
     3241 ggcgaatgcc tcggcaatcc ggccatgttg cggttccgca accgagaacc cggcatcggt
     3301 catccccaaa ggaccgcaaa tccgctcggc cagaaacgag cccagggatt ggccggaaat
     3361 gacctcgatc aaccggccca acacgtcggt tgatcggctg tattcccact gcgtccccgg
     3421 ttgatgcaac aatggcagcc cgcccaatgt cgcaacttgt tcctcgttgg tctgccgcag
     3481 ccgtgacgtc cgcgcatcga tatacgcctt gtgcaccaat gtcgtgcccc ggaactcata
     3541 agtcagaccc gatgtatgcc gcagcaggtc ctgcacggtg atggatcggt gcgccggcac
     3601 caggcgcaac gtgtcgccct ccaccacgcc caccttgggc tgcgcaaatg ccggcagata
     3661 tttttcgatc ggatcgttca acagcagccg gccttcctcc cacagcatca tcacaccaac
     3721 cgacaccaac ggcttggtca tcgaataaat ccggaagatc gagtcagtcc gcatcggcgt
     3781 gccgctggca ggatcctgcc ggccgattgc ttcgaaccag gcaaccttgc cgtgccttgc
     3841 gaccagggcc accgcaccgg gcagatgacc cgccgcgatc cggtcctgca gcgcgctccc
     3901 caaccgggcc agagcggcag aggacaggcc aacgtcttca ggttggcaaa ccggcaaggc
     3961 tccactggac atgtcgggca ttcctttgat caggcactgg atgtcagccg ccagtatcac
     4021 cccatccggc acgcgattga agagcccaga ccccagcgtc aacaggcgcc acgcttgcgc
     4081 caggcggaac ggctcgctag gtctcacgtc ccatgcccga caccacaccg accccagccc
     4141 agaaagccaa ggcaccgcca ccggaagatg gttggcggcc cgatctgctc gcgctgcgtg
     4201 cgcgcctgga tgaactggac aatcaaatcc acgatctgct gatcgaccga gcccaggtcg
     4261 tcgagagtgt ggctcggtcg ggcaagcaat cggcgttccg gcccggccgc gaggccgcga
     4321 tcctgcgccg cctgctggcc cgtcacaccg gcaaactgcc gccgcaaacg ctggtgcgga
     4381 tgtggcggga gttgctggcc ggcaccaccg caatgcagag cgcagtcacc attgcggtgt
     4441 tcgatccggc atcggacggc acgttaccgg ccctcgcccg cgagcatttc ggctttctga
     4501 cacccgcgat cgtgcaccaa tccccggcaa ccgcattgca ggccgtccgc gatggaatgg
     4561 catcggttgc cgtgctcccg ttcccgacag cggccaccgc gtggtgggcc gcgctgactg
     4621 acggcatgcc gaggctgcac atcatcgctc gcctgccttt ctggggcagc cgtcgacctg
     4681 gcgtgcctca gtccgacgct ctggtggtcg ggatcgccgc accggatgcc agcggcagcg
     4741 accggtcctt cattgccaca caagaccgcg cgctgctggc cgatgccggt ctggtcctgc
     4801 acgccacgca cggcatggtt gccgaagtcg aagggatggt ggccgacgac gatccgcgtc
     4861 tgccatctgg cgcaatggtg cttggcggct atgccgttcc ggtggccgga gagccagcat
     4921 gaccgcgccc gcccctcgtc cggaaatcct gaccatcagc ccttacgtcg gcggtgaggc
     4981 aaccgttgcc ggggtcaatc gttcttataa attgtcctcc aacgaaggcg cgttcggcgt
     5041 gccgccgctg gcgcaaaagg cactgcgcga ggccgttgcg gatatgtttc gttatcccga
     5101 tggcggcgcc gaccggttgc gcgaggcaat cggcaaacgt tggggcctcg acccggcgcg
     5161 gatcgtgtgc ggcgccgggt cggatgatct gctgtaccaa ctctgtttgg cctatggcgg
     5221 cccgggccgc gacatcatca tgtcggagca cggtttcacc atttatttca ttgccggaac
     5281 ttatgccggt agccgggtga tcaaagtgcc cgagcgcaac ctgcaacccg atctggacgc
     5341 gatgctggct gcggtctcgc cgtcgaccag ggcggtgttc attgccaacc cgaacaatcc
     5401 gaccggggcg atgattactt ctgccgaaat gacccggttc cgtgccgcgt tgccgcccga
     5461 ggtgttgctg gtgatagatt cagcttatgc cgaatacatc acccgcgacg actataacgc
     5521 cggcgaacag ttggtcgatg ccaccgacaa caccgtcatg acccgcacgt tctcaaaagt
     5581 gttcgggctc gggggtatcc ggctcggctg gtgctatggc ccgccaggcg taatcgacgt
     5641 gctgaaccgc attcgcggct ccttcaatgt ttcggtcgca gcccaggtgg cggggattgc
     5701 ggcattgcag gagaaggggt gggtcgagaa gggttgcgcg cataatgccg agtggcggcc
     5761 tcggtt
//
LOCUS       DATAVD010000583         2237 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_984746, whole genome shotgun sequence.
ACCESSION   DATAVD010000583 DATAVD010000000
VERSION     DATAVD010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_984746"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1424
                     /locus_tag="VHX39_10825"
     CDS             <1..1424
                     /locus_tag="VHX39_10825"
                     /inference="COORDINATES: protein motif:HMM:NF016612.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="neutral/alkaline non-lysosomal ceramidase
                     N-terminal domain-containing protein"
                     /protein_id="HEX3991651.1"
                     /translation="EERRRTKLFRCMFPRRPLVVSLLASLIVMMTGAVEAQEFKAGVG
                     RADITPTGPVRLAGYASRTKPSSTIDQHLFAKALAIQEASGQITLLITADTIGTPRWF
                     NDELAAQIEKELHVDRAHFVFACSHDHSSPVVHGGLTDMYGLSADEAEATEKYTHFFL
                     QRAFEAAQAAVQDLQPAALAFGRSEAFFAGNRRQFGPKGVQFGINPNGLVDRDVPVLR
                     VMREDRSIKAILFGYACHNTTPGPNDEISGDWAGYAQENLERTYPGATALFITGCGAD
                     ANPNPRGSLALARAHGLQLAGAVARALSEPMSVVSGPIAAAFDRVDLPVDKTPDQAYY
                     EAKLQEKAPATQRYARRYLEMLARGEKFAASYPAPVQVLRFGHTLTLIALSGEVVADY
                     SFRLQRELPGEHLWNAAYCNDVFAYVPSMRILTEGGYEADASIIYYGLPTRFAPAVED
                     TLVHKILELVKRTGGTVPTPEKK"
     gene            complement(1513..>2237)
                     /gene="argF"
                     /locus_tag="VHX39_10830"
     CDS             complement(1513..>2237)
                     /gene="argF"
                     /locus_tag="VHX39_10830"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: protein motif:HMM:NF001986.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEX3991652.1"
                     /translation="IRELGGDVLFLNPNDIQLGRGEPIKDTARVLGRMIHGAVIRTYA
                     QSDIEEFAKYSGLPTINALTDEEHPCQILADLQTIREKLGKIEGKVVTFVGDGACNVP
                     ISWMWAAARLDFQLRIAAPKSYQPDAALLARLQTKNVSVTDDIAAAAEGADVLYTDVW
                     VSMGKEDEAAYRLAQLGGYQINAALVAQAKPGALVMHCLPAYRGKEITEEVLEANANT
                     IFTQAENRLHAQKAILSLLARH"
BASE COUNT          415 a          762 c          639 g          421 t
ORIGIN      
        1 cggaggaaag acggcgcact aagctttttc gatgcatgtt cccccggcgc ccattggtcg
       61 ttagtctcct cgcctcgctc atcgtcatga tgaccggagc cgtcgaggcc caggagttca
      121 aggccggcgt tggccgggcg gacatcacgc ccacggggcc ggtccggctg gccggctatg
      181 cttcgcgtac caagccttcg tccacgatcg accagcacct ctttgccaag gcgctggcca
      241 ttcaggaagc ctcgggtcaa atcaccctcc tcatcacagc ggatacgatc ggcacgccgc
      301 gttggttcaa tgacgaactc gccgcgcaaa tcgagaagga gctccatgtt gaccgggcgc
      361 atttcgtttt cgcctgctcc cacgaccact cgtcgcccgt cgtccacggt ggtctgaccg
      421 atatgtacgg gctcagcgct gatgaagcgg aggccacgga aaaatacacc cacttttttc
      481 tccagcgcgc gttcgaggcg gcacaagccg ccgtccagga tctccaacca gcggccctgg
      541 ctttcggacg cagcgaggcc ttttttgccg gcaatcgccg ccagttcgga ccgaaaggcg
      601 tgcaattcgg catcaacccc aacggcctcg tggaccgcga tgtgccggtc ttgcgtgtta
      661 tgcgcgaaga ccggtcgatc aaggccatcc tcttcggcta cgcctgccac aacaccacgc
      721 ctggaccgaa tgatgaaatc agcggcgatt gggcgggcta cgcccaggaa aacctcgagc
      781 gcacttatcc cggagccacc gcgctcttca tcaccggctg cggagcggac gccaatccca
      841 acccgcgcgg cagcctcgcc ctggcccgcg cccacggttt gcaactggcc ggagcggtcg
      901 cccgcgcctt gagcgaaccg atgagcgtgg tcagcggccc aatcgccgcc gcgttcgatc
      961 gcgtcgacct gccggtcgac aagacgccgg accaagccta ctacgaagcc aagctgcagg
     1021 agaaagcccc tgccacgcaa cgttacgcca ggcgctacct cgaaatgctc gcgcgcggcg
     1081 agaagttcgc cgcgagctac ccggcgcccg tccaggttct gcgcttcggc cacaccctca
     1141 ccctcatcgc tcttagtggt gaagtcgtgg ccgactactc ctttcgactc cagcgtgagt
     1201 tacccggtga acacctctgg aatgccgcct actgcaacga tgttttcgcc tacgtcccct
     1261 ccatgcgcat cctgaccgaa ggcgggtacg aagccgatgc cagcatcatc tattatggcc
     1321 tccccacccg ctttgctcca gccgtcgaag acaccctcgt ccataagatc ctcgaactgg
     1381 tcaaacgcac cggcggcaca gtcccgacgc cggagaaaaa gtaaacgccc acccgcgtcg
     1441 gctgcgtgcc gttttaaata cggcaggtgg agaggcttgt gccaaccgcc tttcttcgct
     1501 gcctttcggc agctagtgcc gggccagcaa actcaggatc gccttctgcg catgcagacg
     1561 gttctcggcc tgggtaaaaa tggtgttcgc gttggcttcg aggacttcct cggtgatctc
     1621 cttgccccgg taagccggaa gacagtgcat gaccagcgcg cccggtttgg cctgggccac
     1681 gagggcggca ttgatctggt agccgccgag ctgggccagc cggtaggcag cttcgtcttc
     1741 cttgcccatg ctcacccaca catcggtgta gagcacatcc gcgccttcgg ccgcggcggc
     1801 gatatcatcg gtcacggaga cgttcttcgt ttgcaaccgg gcaagtaacg cggcgtcagg
     1861 ctggtagctc ttgggcgccg cgatccgcag ttgaaaatcg agccgcgccg ccgcccacat
     1921 ccaggagatc ggcacattgc acgccccatc gcccacgaag gtcacaacct tgccttcgat
     1981 cttgcccaat ttctcgcgga tggtctgcag atcggcgaga atctggcaag gatgctcctc
     2041 gtcggtcagg gcattgatcg tcggcagccc ggaatatttc gcaaattcct cgatgtcact
     2101 ctgcgcatag gtccgaatga ccgcgccgtg gatcatcctc ccgaggacgc gtgcggtatc
     2161 cttgatcggt tcgccccggc cgagctggat atcgttggga ttgagaaaaa gcacatcgcc
     2221 acccagctcg cggatgc
//
LOCUS       DATAVD010000584         1515 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3593408, whole genome shotgun sequence.
ACCESSION   DATAVD010000584 DATAVD010000000
VERSION     DATAVD010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3593408"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..528
                     /locus_tag="VHX39_10835"
     CDS             <1..528
                     /locus_tag="VHX39_10835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX3991653.1"
                     /translation="SVRPQAVMMGNSATPAALPVVELRHRGFKGTIYGNHGIVSPAFI
                     KVGGAAVEGVIAVTSPVVVYDQLPADNPVKPVATAFMTDYTKQFGPQSMNPFAGYSYD
                     AMLLLKNAIPAALKAGEPGTEAFREALRNALESTHGLVGVSGVYDMSATNHNGQDARA
                     AVLVEVKDGAWRAMQ"
     gene            560..>1515
                     /locus_tag="VHX39_10840"
     CDS             560..>1515
                     /locus_tag="VHX39_10840"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3991654.1"
                     /translation="MDLFVFLALLQDGITTGAIYLLLAIGLLIVFSVTRVIFVPQGDL
                     LAFGTLTVAGLQSGHLPGTLWLLDGVSAAALVASLFGGRRAAVLGVLAWGVFPLIVTV
                     AAWVLVPYQVPAVSIVLALAIVTPMGPLIWRFAFRPIAGASVLALLILAMALHFVLIG
                     VGLVFFGPEEASAPTLTDASFDFGLLNVSGQSLAVVLCCVVLIAGLRWFFGATIHGKA
                     MRATASDRLGARLVGIDAGTTGALAFGLASFIAALAGVLIGAVTPLSYDAGFDIGLKG
                     FVAAIMGGLVSYPMAAAGAVLVGVLESLVSFWASAYREVIVFT"
BASE COUNT          198 a          442 c          537 g          338 t
ORIGIN      
        1 agcgtccgtc cacaggcggt gatgatgggc aactcggcga cgcccgctgc cttgccggtg
       61 gtcgaactgc ggcatcgcgg gttcaagggc accatttacg gcaaccacgg catcgtcagt
      121 ccggccttca tcaaggttgg cggggcggcg gtcgagggcg tgattgcggt cacctccccg
      181 gtggtagtct acgaccagtt gccggcggat aacccggtca agccggtggc gacggcgttc
      241 atgaccgact acacgaagca gttcggtccg cagagcatga atccgtttgc cggctacagt
      301 tatgacgcca tgctgctact gaagaatgcc attccggctg cactgaaagc gggcgagccg
      361 ggcaccgagg cgttccgtga ggcgttgcgc aatgcgcttg aatccaccca tggcctggtc
      421 ggcgtcagcg gcgtgtatga catgtcagcc accaaccata acgggcagga cgcccgcgcc
      481 gcggtgctgg tcgaggtgaa ggacggcgcc tggcgagcca tgcaataggc gcccgctcgc
      541 ctgaggcacg ccacgcggca tggatctgtt tgtctttctg gcgctgctgc aggacggcat
      601 caccaccggc gcgatttatt tgctgctggc gatcgggctg ttgatcgttt tctcggtgac
      661 gcgggtgatt ttcgttccgc aaggcgatct gttggcgttc ggtaccctga ccgtggccgg
      721 gctgcaatcg gggcatctgc cgggcacatt atggttgctg gacggggtct cggcggcggc
      781 gttggtcgcc tcgttgttcg gcggccggcg cgcggcagta ttgggtgtgc tggcctgggg
      841 tgtatttccc ttgatcgtga cggtggcggc gtgggtcctg gtgccgtatc aggtgccggc
      901 ggtttcgatc gtgctggcgc tggcgatcgt tacaccgatg ggaccgttga tctggcgctt
      961 cgctttccgc ccgattgccg gagcctccgt gctggcgttg ctgatcctgg cgatggcgtt
     1021 gcatttcgtg ctgatcggtg tgggcctcgt attcttcggg ccggaggagg ccagcgcgcc
     1081 gactctgact gacgccagct tcgatttcgg cttgctgaac gtctccgggc aatcgctggc
     1141 ggtggtgttg tgctgcgtcg tgctgattgc cggcctgcgt tggttcttcg gggccacgat
     1201 ccacggcaaa gccatgcgag cgaccgcctc cgaccgactg ggtgcccgcc tcgtaggtat
     1261 cgacgccggc accaccggcg ctctggcctt cgggttggcg tcgttcattg ccgctctggc
     1321 aggcgtgctg atcggcgcgg tcacgccgtt gtcctacgat gccgggttcg acatcggcct
     1381 caaaggcttt gtggcggcga tcatgggtgg gttggtgtcg tacccgatgg cggccgccgg
     1441 cgcggtgttg gtgggcgtgc ttgaatcgct cgtcagcttt tgggcgagcg cttatcgtga
     1501 ggtcatcgtg ttcac
//
LOCUS       DATAVD010000585         6397 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_984889, whole genome shotgun sequence.
ACCESSION   DATAVD010000585 DATAVD010000000
VERSION     DATAVD010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6397
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_984889"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(197..883)
                     /locus_tag="VHX39_10845"
     CDS             complement(197..883)
                     /locus_tag="VHX39_10845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991655.1"
                     /translation="MNKSAAEILREYGPFPGADRVHGVTFDGQHVWFASGDKLNEFDP
                     ASGQTVRSIDVAAHAGTAFDGQYLFQIAEDVIQKIDPKTDRVLATIPAPGRGGDSGLA
                     WAEGTLWVGQHRGRKIHQIDPETGAILRTIESNRVVTGVTWVDGELWHGTLEGDESDV
                     RRIDPQTGKVLEQLEMPSGTGVSGLESDGGDQFFCGGGSSGKVRTIRRPREGSAARGE
                     PATHVASQRR"
     gene            complement(983..2251)
                     /locus_tag="VHX39_10850"
     CDS             complement(983..2251)
                     /locus_tag="VHX39_10850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HEX3991656.1"
                     /translation="MMTAIGVDFGTTNSVVSFLDPNGNTTTMRYNLGSAELDVIRSVL
                     CFWNDGPKDRVTLRHAIGPEAIDAYLDDPLESRLIMSLKSWLAQRSFTETRVFGRVFT
                     LEDLIALFLRGILPKRSDQTPDTLLVCGRPVRFAGDAPDDALGEQRLRTAYAAAGWAD
                     IQTALEPEAAGYRFIRGLSAPAVVLIGDFGGGTSDFSVLRFEPRRNRRVEPLGHAGIG
                     IAGDTFDYRIVDHLISPRLGKGTTYRLFETDLPVPPEYYSSFARWHRLSLMRTPRTMR
                     DIEAVARTAAHPDRLRALLRLIRDELGYALYRAVSEVKAELSRAETAVLQFTHADFTI
                     DEMVTRQDFEHWIAPDLARIDATVQVALAEAGLRENEVDHVFLTGGTSLVPAVRDLFV
                     TRFGADRITGGSEFVSVAEGLALIGGDRSN"
     gene            2614..3363
                     /locus_tag="VHX39_10855"
     CDS             2614..3363
                     /locus_tag="VHX39_10855"
                     /inference="COORDINATES: protein motif:HMM:NF017771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF899 family protein"
                     /protein_id="HEX3991657.1"
                     /translation="MIDLIRENPAAPMVVDRATFQAELDALRVREKLHTKEGDALAAA
                     RRRLPMVEVDGATPLIGDHGAVPLLDVFEGRRLLVAYYFMWNAGKTAAEQCEGCTFYT
                     SQVRELSFLHSRDVTYATFCQGPYEEGARYRDFMGFEMPWYSASQDSLETLLVGRRVG
                     MMHIVCYLRQGSKVFETYWTTRRGVEAMDNSYRLLDLTVYGRQEPWEDSPAGWLSASQ
                     GKHGYRTDGRPIVQWPRVKAGFSDDLGTGGR"
     gene            3485..3760
                     /locus_tag="VHX39_10860"
     CDS             3485..3760
                     /locus_tag="VHX39_10860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991658.1"
                     /translation="MNCNEANQATPFVDWMSLAAAPIFLIMALLTSGIGGGPPDLLCS
                     AAHGALPLSGMAPMYLLMSAFHSGPWVKLINRRPRAARRSSPMGLHH"
     gene            4037..5215
                     /locus_tag="VHX39_10865"
     CDS             4037..5215
                     /locus_tag="VHX39_10865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX3991659.1"
                     /translation="MPTNKPRGRQFFANPGPTNIPDSVLRAMDRPSVDFNDPEFVEVY
                     DEAFAGVKRVLRTNQHLFMYNASGHGAWEASLTNLLSPGDTILVLETGFFSDQWADMG
                     IGHGLTIRTLEADRRMGIDLAALRAALAADTAGEIKAVCAVHNETATGLMLPVDQIRA
                     AIDATGHQALFLVDTISSLGSLEFRMDDWKIDCVVGGSQKGLMLPTGMSFTGVSDKGM
                     QAHASAGLKRHYFDWTMMAKRPQKSFIGTLPVNIFYGLRESIRLLEDEGLDNVIARHT
                     RLAEATRRAVKVWAGNNGPQLYCLNPTRYSNSVTTILMPEGHDAEAIRQTARFRFNVS
                     LGGGLGALGGKVFRIGHLGDLNEPMLMGALTAVEMALRINNVPHGKGGVDAAMDYLVS
                     "
     gene            5310..>6397
                     /locus_tag="VHX39_10870"
     CDS             5310..>6397
                     /locus_tag="VHX39_10870"
                     /inference="COORDINATES: protein motif:HMM:NF026177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HEX3991660.1"
                     /translation="MFTFRTISARLVLAISLIIAVTCGVLGTFSILQQRSLLQLALDQ
                     QLRLQFDSVASAIDYEGRAARAVGGVIAALPPVADGIAKGDRAALLALLRDPGNSLKA
                     QGIPRFGIIVPPATIFLRPLAPDSPGGDISARRPTVVLANQTGKPFAGVEMGPEALAT
                     YATTPVMRDGKSLAVIDIGVAFGKEFVDRIRQRFGIDLAVHSFDGTSFHTLASTFGDA
                     GVATPQELKAALDGAELRRDATFGGHPAAVWLGRVRNYGGQPVAVLELIKDTTQYQAV
                     SAAALRNLLLATAIILGCGISLALLIGRSLSRPLSAITATMNRLSGGDTSVTIPGSER
                     PDELGTMAKAVDVFRQSMIDAASLARAQA"
BASE COUNT         1131 a         2034 c         2012 g         1220 t
ORIGIN      
        1 ggcaagagcc cgagcgcctg gcgcaccgag cggagcgctg caccggacgc gacgataacc
       61 cagcgttagt ttccaaagtc ggtcggaccg ttagtcgcga ttccgctttc gtcatccccg
      121 cgcttgtcac ggggattaac gtccgcacat tgccgcgatc gcgcccggga ctagcccggg
      181 gaggacgatt gggtgtttat cggcgctggg aggcgacgtg cgtcgcaggc tcaccacggg
      241 ctgccgagcc ttccctgggc cgacgaatgg ttctcacttt cccgctgctg ccgccgccgc
      301 agaagaactg atcgccaccg tcggactcga gcccgctgac gccggttccc gacggcatct
      361 cgagctgttc cagaaccttt cccgtttgcg ggtcgatacg ccggacatcg ctctcgtcac
      421 cctccagggt gccgtgccag agttcgccgt cgacccaggt gacgccggtg acgacacggt
      481 tggactcgat ggtgcggaga atcgccccgg tctcaggatc gatttgatgg atcttgcggc
      541 cccggtgctg cccgacccag agcgtccctt cggcccaggc gagtcctgag tcaccgcctc
      601 ggccgggcgc cgggatggtg gcgagcactc gatctgtctt cggatcgatt ttctggatca
      661 catcctcggc gatctgaaac aaatactgac cgtcgaacgc ggttcccgca tgcgcggcga
      721 catcgatgga gcgcacggtc tgaccgcttg ccggatcaaa ttcattcagc ttgtcgccgg
      781 acgcaaacca cacgtgctga ccgtcgaagg taacgccgtg aacccggtcg gcacccggaa
      841 aaggtccata ttcgcgaagg atttcggcgg ctgacttgtt catgctgctg tccttgccag
      901 ttgtcatgcc gccaacttag tcactcgggc atgggtcggg gagtaacaag tttggcggga
      961 ataccggcgc ggcgtttctg gctcagttcg accggtcgcc gccgatcagt gccagtccct
     1021 ctgctaccga aacgaattcg ctaccgccgg tgatccggtc tgcgccaaat cgtgtcacga
     1081 acaggtcgcg tacggcaggc accagcgatg tgccgccggt gaggaacacg tgatccacct
     1141 cgttctcccg caagccggct tcggccagtg cgacctgcac ggtcgcgtcg atgcgggcga
     1201 gatcgggcgc gatccaatgc tcgaagtcct ggcgcgtgac catctcgtcg atggtaaagt
     1261 cggcatgggt gaattgcagc acggctgttt cggcccgcga cagttcggct ttcacctcgg
     1321 acacggcgcg gtacagcgcg tagccgagtt catcgcgaat cagacgcagc aaggcacgca
     1381 agcgatccgg gtgcgcggcg gtgcgcgcca ccgcttcgat gtcgcgcatc gtacgaggcg
     1441 tgcgcatcag cgacagccgg tgccagcgtg caaaactcga gtaatattcc ggtggcaccg
     1501 gcagatcggt ctcgaacaat cggtaggtgg tgcccttgcc cagtcgaggg gagatgaggt
     1561 ggtcgacgat gcggtagtcg aatgtgtcac cagcgatacc aatacccgcg tgacccagag
     1621 gctccacccg gcgattgcgt cgcggctcga agcggagcac ggaaaagtcg ctggtgccgc
     1681 cgccaaagtc accgatcagc acgaccgccg gcgcactcag gccgcggatg aaacgatacc
     1741 cggcggcctc cggctccagt gcggtctgga tatcggccca acccgcagcg gcgtaagcgg
     1801 tgcgcaaccg ctgctcgccg agggcgtcgt cgggcgcatc cccggcgaac cgcaccggac
     1861 ggccgcagac cagcagggtg tccggagtct ggtcgctgcg tttcggcagg atccctcgca
     1921 ggaataacgc gatgagatcc tccagcgtga agacgcggcc gaacacgcgg gtttccgtga
     1981 agctgcgctg cgccagccag cttttgagcg acatgatcag acggctctcc agcggatcgt
     2041 cgaggtaggc atcgatcgcc tccggcccga tcgcatggcg caatgtgaca cggtccttcg
     2101 gcccgtcgtt ccagaagcag agcaccgagc ggatgacatc cagttccgca gagccaagat
     2161 tgtagcgcat cgtggtggta ttgccgtttg gatccaggaa cgagacgaca ctgttagtgg
     2221 tcccgaaatc gacgccgatc gcagtcatca tggtgcccca tcgccgaaag ggccgggacg
     2281 aaaaagccgc cccggcccgc atgaccgcgc tagttacagg gtttgccgtt ggctgaccac
     2341 ttgttcgtgt aatcgggcaa ttcggcgatc tcctgccgct taatgctttt gtgacgggac
     2401 ctggccgccg ccaccatggc gatcagcccg cggatcggaa tcccgccaca cttgtaactc
     2461 tcatcatggc gacgtccgga cctaagttct tcttgcgacc aataaggcgg tcgagacccc
     2521 ggccgacgtg gccggtggcg atgctgaggc gaatatcccg ttcacccccg cacatttgct
     2581 ttgcgacagg tgcggcacaa tacggagagc aaaatgatag acttaatccg agaaaacccc
     2641 gcagccccca tggttgtcga tcgggcaacg tttcaggccg agcttgatgc attgcgggtt
     2701 cgcgagaagc tgcacacaaa ggaaggcgat gcccttgccg ccgctcgccg gcggctgccc
     2761 atggtcgaag tcgacggtgc gacgccgctg attggcgacc atggagcagt ccctctattg
     2821 gatgtgtttg agggacgccg gttactcgtt gcgtactact tcatgtggaa cgccggcaaa
     2881 acggcagcgg agcagtgcga gggttgcacc ttctacacat cgcaggtccg cgagctgtcg
     2941 ttcctgcatt cccgtgacgt tacctacgcc acattctgcc agggcccgta tgaggagggc
     3001 gctcgctacc gcgacttcat gggttttgag atgccttggt actcggcgtc tcaggactcg
     3061 ctcgagacac tcctggtcgg gcgccgcgtg ggcatgatgc atatcgtttg ctatctgcga
     3121 caaggatcca aggtttttga gacttactgg acgacgcggc gcggcgttga ggcgatggat
     3181 aacagctatc ggttgctcga cctgacggtg tacgggcgtc aggagccctg ggaagactcg
     3241 ccggccggct ggctgagtgc ttcgcagggc aagcatggct accggaccga tggacgtccc
     3301 attgtccagt ggcctcgcgt gaaagctgga ttttccgacg acctgggaac cggcgggcgc
     3361 tgacgcgcgc ctgccacttc ttccactctc tgccgaacgt tccggcgcgg tcgggttcga
     3421 ttgctcgatg ttgcggctgc gccggaacga tcaatattgc gttaacgtcg ggagcccgtg
     3481 tccgatgaac tgcaacgaag ccaaccaggc aacccctttc gtcgactgga tgtcgctggc
     3541 agctgcgccg atcttcctca tcatggcgct gcttaccagc ggtatcggtg ggggtccgcc
     3601 ggatttgctg tgctcggccg cgcatggtgc gttgccgctg agcggaatgg ccccgatgta
     3661 cttgctgatg agcgccttcc actcagggcc ctgggtgaag ctgatcaacc gccggccaag
     3721 ggctgcccgc cgatcatcgc caatgggttt gcatcattga cgctgacggc atcctccgcg
     3781 tgagcggagg atgcatcgtc gcggctgttg gtctgcttca caatacacct ggctgacgtc
     3841 atcatgtgat ggtcgaaagc gagcatggtt gcgtcgtgcc cgaacacttg tgatcacatg
     3901 ccacacaccc ggcatctgaa cagacggtcc ctgcctggat gcccgggttg tcgaacccca
     3961 cctttacaac cggccgattt cgcccatgga tgcgcccgcc agccaaggct ggcgcctcgc
     4021 tcacaaggac cctttcatgc ccaccaacaa gccccgtggc cgccagttct tcgccaaccc
     4081 cggcccgacc aacattcccg acagcgtgtt gcgggccatg gaccgcccca gtgtggactt
     4141 caacgacccc gagttcgtcg aggtctacga tgaggccttc gccggcgtga aacgcgtcct
     4201 gcgcaccaat caacatctgt tcatgtacaa cgcctccggc catggcgcct gggaggccag
     4261 cctgaccaat ctgctgtccc ccggcgacac catcctggtg ctggagaccg ggttcttttc
     4321 cgaccaatgg gccgacatgg gcatcggcca tggcctgacc atccgcaccc ttgaggcaga
     4381 ccgccgcatg ggcatcgatc tggctgcgtt acgcgctgct ctggccgccg acaccgcggg
     4441 cgagatcaag gccgtctgcg ccgtgcataa cgaaaccgcc actggcctga tgcttccggt
     4501 tgatcagatc cgcgcagcga tcgatgccac tggccaccag gccctgttcc tggtcgatac
     4561 catttcttcg ctcggatcgc tcgagtttcg catggacgac tggaagatcg actgcgttgt
     4621 cggcggcagc cagaagggcc tgatgctgcc gaccggcatg agctttacgg gtgtctccga
     4681 caaaggcatg caggcgcacg caagtgccgg cctgaagcgg cattatttcg attggacgat
     4741 gatggcgaaa cgtccgcaaa agagtttcat cggcaccctg ccggtgaaca tcttctatgg
     4801 cctgcgcgag tccatccggc tgttggaaga cgaagggctg gacaacgtca ttgcccgcca
     4861 cacccgcctc gccgaggcca ccaggcgtgc tgtcaaggtc tgggctggca acaacgggcc
     4921 gcaactgtat tgcctcaacc cgacgcggta ctccaattcg gtgaccacca tcctgatgcc
     4981 ggagggccat gacgccgagg ccattcgaca aaccgcacgc tttcgcttca acgtctcgct
     5041 tggcggcggg cttggcgcgc tgggtggcaa agtgttccgg atcggccacc ttggcgacct
     5101 gaacgagccg atgctgatgg gcgccctgac cgcggtggaa atggccttgc gtatcaacaa
     5161 tgtgccgcac ggcaagggcg gcgtggatgc ggcgatggat tacctggtga gctgagcggc
     5221 gccccgggat tcgtcacccg ggttaacaat ttattcatgc ctgtgtgcga cgtggtgggt
     5281 tcgctgttga caccaccatc gaggcaccga tgttcacgtt tcgcacgatc tctgcgcgcc
     5341 tggtcctggc gatctcgctg atcattgccg tgacctgcgg ggtgctaggg acgttctcga
     5401 tcctgcagca gcgttctttg ctgcaactgg cgctcgacca gcagctacgg ctgcaattcg
     5461 acagcgtcgc cagtgcgatc gattacgagg gacgggcggc aagggcggtc ggcggggtta
     5521 tcgcagcgct gccgccggtg gcggatggca tcgccaaggg tgaccgcgcg gctcttctgg
     5581 ccctgctccg cgaccccggc aacagcctga aggcgcaggg cattccgcgg tttggcatta
     5641 ttgtgccccc ggcgaccatc tttttgcgtc cgctggcccc tgactcgcct ggcggcgata
     5701 tctccgcccg ccggccaacg gtcgtacttg cgaaccagac cggcaagccg tttgccgggg
     5761 tcgagatggg gccggaggcg cttgccacct atgccacgac gccggtcatg cgggatggca
     5821 aaagccttgc cgtcatcgat atcggcgtcg ccttcggcaa ggaattcgtc gaccgcatcc
     5881 ggcagcggtt cggcatcgat ctcgccgtgc acagtttcga cggcacatcg ttccacacgc
     5941 tcgcctcgac cttcggcgat gcgggtgtgg ccacgccgca ggaactgaaa gccgcgctgg
     6001 atggcgcgga gctacggcgc gatgccacgt tcggcggcca tcccgccgcg gtttggctgg
     6061 gccgggtcag gaattacggc ggtcagccgg tcgcggtgct cgaactgatc aaggacacca
     6121 cgcaatacca ggccgtctct gctgccgccc tgcgcaacct tctgcttgcc acagccatca
     6181 tattgggctg cggaatttcg ttggctctgc tgattgggcg cagcctgtca cgcccgttga
     6241 gcgcgattac tgcgaccatg aaccggctgt ccggcggcga cacatcggta acgatccccg
     6301 gcagcgagcg gcccgatgaa ctcggcacga tggcgaaggc ggtcgacgtg tttcgccaga
     6361 gcatgatcga cgccgcgagt ctggccaggg cgcaggc
//
LOCUS       DATAVD010000586         2607 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2661394, whole genome shotgun sequence.
ACCESSION   DATAVD010000586 DATAVD010000000
VERSION     DATAVD010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2607
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2661394"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..363
                     /locus_tag="VHX39_10875"
     CDS             <1..363
                     /locus_tag="VHX39_10875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003624431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase"
                     /protein_id="HEX3991661.1"
                     /translation="AKDKGYVTTPFGRRCWISGINDKLQARRSYAERQAINAPLQGGA
                     ADIIKRAMVQLPPVLERECPSTRMLLQVHDELLFEVPQADAPALADVATRIMEAAATL
                     SVPLVVETGTGHSWAEAH"
     gene            369..572
                     /locus_tag="VHX39_10880"
     CDS             369..572
                     /locus_tag="VHX39_10880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991662.1"
                     /translation="MAATVIVDFVTAWLAIGVLVGLVFLFMGIDQVDDSAHRAYAFRP
                     LLLPGLTLLWPFVLLRWFALTRP"
     gene            709..1737
                     /locus_tag="VHX39_10885"
     CDS             709..1737
                     /locus_tag="VHX39_10885"
                     /inference="COORDINATES: protein motif:HMM:NF013918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX3991663.1"
                     /translation="MTERYVPVGWNISKIVYDAVVLAVIGIYIGVFMWIAPAFQHVTL
                     PLDDYTMRMNAFGTCAFLLLSVILAIGPAARLDSRFLPLLYNRRHLGVLTAAVAVTHA
                     YAALDWYFSYGPNDRFEMLLRGNTSFLQVHGFPFELFGIFSLLVLLLLAATSHDFWLR
                     FLTPAVWKALHMSLYAAYLSVVLHISLGAMQAAQNPLLAVTVLLCAFGVAALHLAASR
                     RIVESPLLEGWLYAGAVDAIEEDHGIVVTPPDAEQIAVFRHAGHLSAVTNLCAHQNGP
                     LGEGRVVEGCITCPWHGYQYRLDDGQAPPPFTEALATFHLRIVDGHIWIDPQPNLPGT
                     FVAPVAVR"
     gene            1779..2444
                     /locus_tag="VHX39_10890"
     CDS             1779..2444
                     /locus_tag="VHX39_10890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991664.1"
                     /translation="MLGFLALVLVSLLAGFGALAFALGVAVDDPGGGDFTGDKAITGT
                     LIADPYPMIVTDNDHHTILLSGGGKRGVQVDARPLDGKHVHATGAGVKRGDRDMLLVD
                     QLLPVPGEALAAVREPLGTWRLTGEICDGKCSLGVMRPGNKAAHKACANVCLIGGVPP
                     VFITTTPVLGTQYLLMGDPQDHTLPDALRDFVAITTRMDGTLERIGDALVFRTDVTKA
                     IVP"
BASE COUNT          410 a          748 c          842 g          607 t
ORIGIN      
        1 gcgaaagaca aaggttacgt aacgacgccg ttcggccgcc gctgctggat ctccggcatc
       61 aatgacaagc tgcaggcgcg ccggtcgtat gccgagcgcc aggcaatcaa cgcgccgtta
      121 caaggcggtg ccgccgacat catcaaacgt gcgatggtgc agttgccgcc ggtgctggaa
      181 cgcgagtgcc cgtcaacccg gatgttgttg caggtgcatg acgaactgct gttcgaggtg
      241 ccccaggcgg atgcgccggc gttggccgat gtggctaccc gtatcatgga agccgccgcg
      301 accctctccg tccccctcgt cgtagagacc ggtaccggcc attcctgggc tgaggctcac
      361 tgatcgcaat ggctgccacg gtcattgtcg attttgtgac ggcgtggctg gcgattgggg
      421 ttctggtagg cttggtgttc ttgttcatgg gcattgacca ggtcgacgac tccgcacacc
      481 gcgcctatgc gtttcggccg ttgctgttgc ccggccttac gctgctgtgg cccttcgtcc
      541 tgctgcgctg gttcgcgctg acgcgaccat gaggcggcgt catcgtgagg tccatcgcat
      601 gacctggctg gtcatggcgt tcctgctgcc ggcgatcgtg ttggtctcgc tgatgctgcg
      661 cccgatcggc ccgaccgagg caccacagat ccaactggcg gcgccgaaat gaccgagcgt
      721 tatgttccgg tcggctggaa tatcagcaag atcgtttacg atgcggtcgt gctggcggtg
      781 attggcattt atatcggcgt gttcatgtgg atcgccccgg cgtttcaaca cgtgacactg
      841 ccgctcgacg attacacgat gcgaatgaac gcattcggca cctgcgcgtt cctgctgttg
      901 tcggtcattt tggcgatcgg accagcggcg cggctggatt ctcgattcct gccattgctg
      961 tacaatcgac gccatctggg cgtgctgacg gcagcggtcg cggtcacaca tgcttatgcc
     1021 gcgctcgact ggtatttcag ctatggcccc aatgaccgat tcgaaatgtt gctgcgtggc
     1081 aataccagct tcctgcaggt gcacgggttt ccgttcgagc tgttcggcat cttttcgctg
     1141 ctggtcttgt tgctgttggc tgcaacaagt cacgactttt ggctgcggtt cctgaccccg
     1201 gcggtttgga aggcgctgca tatgtcgctg tatgcggcgt acctgtccgt ggtcctgcac
     1261 atctcactcg gcgcaatgca ggcggcacaa aatccgctgc tggcagtgac ggttttgctt
     1321 tgcgcattcg gcgtcgcagc gctgcatttg gccgcgtcgc gccggatcgt tgagtcgccg
     1381 ttgctggaag gctggcttta tgccggtgcc gtggacgcga tcgaggaaga tcacggcatc
     1441 gtcgttacgc cgccagacgc ggaacagatt gctgtcttcc gccacgctgg tcatctgtca
     1501 gcggtcacca atctctgcgc ccatcagaac gggccgttgg gtgagggcag ggtggtcgaa
     1561 ggttgcatta cctgtccgtg gcatggttac caataccgat tggatgacgg acaggcgccg
     1621 ccacctttta ccgaggcact ggcaaccttc cacctgcgaa tcgtcgatgg tcatatctgg
     1681 atcgatccgc agccgaatct acccggcaca ttcgttgctc cggttgccgt acggtgacgc
     1741 cattctttgt cggttggtca gctcgtagcg ccgtcccgat gctcgggttt ctggcactgg
     1801 tgctggtgtc gctgttggcc gggtttggtg cactggcgtt tgctttgggt gtggccgtcg
     1861 atgatcccgg aggcggcgat ttcaccggcg acaaagcgat caccggcacg ctgattgccg
     1921 atccgtatcc gatgatcgta acggacaacg accatcacac gatcctgttg tcaggcggtg
     1981 gcaaacgggg tgtgcaggta gatgcgcgcc cgctggatgg caagcatgtg catgccaccg
     2041 gtgccggggt gaaacgaggc gaccgcgata tgctgctggt cgatcaactg ctaccggtgc
     2101 cgggcgaggc cttggccgcg gtccgcgagc ctctcggcac ctggcgtctc accggcgaga
     2161 tctgtgacgg caagtgttca ctgggcgtta tgcggcctgg taacaaggcg gctcataaag
     2221 cctgcgccaa tgtctgcctg atcggaggcg tgccgccggt gttcatcacg actactccgg
     2281 tgttgggcac acagtatttg ctgatgggcg acccgcaaga ccacacccta ccggatgcgt
     2341 tgcgcgattt cgtggcgatc acgaccagga tggatggcac attggaacgg atcggtgatg
     2401 cactggtttt ccgtaccgac gtgacgaagg cgattgtgcc atgatgtggc gttcgaccgt
     2461 gatgctcgtg ctggcatttg tggcggcggg gtatgcggtc tggtacgggc cgctactatt
     2521 ggactggatc ggtctcggcg agtttgtctt tatcgggcag ctcggcttgc cgatcctggg
     2581 gttgtcggtt ctggaaccgc tgtttcg
//
LOCUS       DATAVD010000587         4400 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_426922, whole genome shotgun sequence.
ACCESSION   DATAVD010000587 DATAVD010000000
VERSION     DATAVD010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4400
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426922"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..448)
                     /locus_tag="VHX39_10895"
     CDS             complement(<1..448)
                     /locus_tag="VHX39_10895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991665.1"
                     /translation="MTKIDAGSDAHKELFCRQFIDTHERFDPDTLPWPELDDAALARL
                     RGVPFWQEVFHTERRAGAIVDAFTPHVADPVVREAVALQGVEETRHAKLIRVMIDRYG
                     LDATEQPLEALPADIETAFIDFGFGECLDAFLGFGAFKTARQSAFLP"
     gene            complement(528..1325)
                     /locus_tag="VHX39_10900"
     CDS             complement(528..1325)
                     /locus_tag="VHX39_10900"
                     /inference="COORDINATES: protein motif:HMM:NF016221.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEX3991666.1"
                     /translation="MPRLVAPAAIVAAVALIAPLAVAHSYLQTASPPVNSTVTATPNQ
                     VVITFTQAIEPRYATIEVTNANHQRVDDGESHLAGSDAKRLGVPLQPLPPATYTVVWR
                     ATSVDTHNTEGSSQFTVAAVDPSAISLEHVWARATPGTATTGAVYLTVTDNGRPDRLV
                     GVSTPIAAMAEMHETIHDNGVMKMRPVAGGIALDPGKPVTFTPGGYHVMLTGLKSPLK
                     AGDSFPLTLTFEHARSITVSVHVEAMGAGGMNHDGMQSMPGMQDQKP"
     gene            complement(1850..3223)
                     /locus_tag="VHX39_10905"
     CDS             complement(1850..3223)
                     /locus_tag="VHX39_10905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="HEX3991667.1"
                     /translation="MTYLAPNSVQARDIASIAHPQTNLARHLEEGPFVIGGGEGCFVT
                     DDNGKRYLDAAAGLWCASLGYASERLARVAYEQMRKLGYYHMYRGTTHENAVDLAEKL
                     LSIAPVPMSKVLFQCSGSEANDTAIKLVWYYHAAIGKPEKRKIIGRHMGYHGSTSAAI
                     SASGKPDMHADFGLPFPGFLHTEFPHYYRRHEVGESEEQFATRMADELEKLILREGPD
                     TCAAMIAEPVMGAGGGITPPRTYWEKIQAVLRRYDMLFIADEVICGFGRTGNMWGSQT
                     FDLQPDMISCAKALSGGMQPISALMVNQRVFDAMLDESRKLGGFAHGFTYAGHPVTTA
                     VAMEVLRIYDEIDMLGHVQEVGPYLQQAAAGLADHPLVGDVRGVGMIAALEMVADKNS
                     RAPFDPALKVGAIADKYAREHGLIARFIGDRIAFSPPLVICEAEIDVIMARVRRALDD
                     TLNELRG"
     gene            3307..>4400
                     /locus_tag="VHX39_10910"
     CDS             3307..>4400
                     /locus_tag="VHX39_10910"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEX3991668.1"
                     /translation="MSTEGRVVFGKMDEVVFGKPAAGQVAEQTRRLGAERVLLMVSGT
                     LHRETDEIAWIRAALGNRCVGVFDKMPAHTPRSAVIAAAAMARESQADLIVTVGGGSI
                     TDGAKAVQLCLANDITTVEGLDACRGDAAFRPPTIRQISVPTTLSAGEFSGIAGVTNE
                     ATRVKELFRHPMVIPSAVILDPALTVHTPEWLFLSTGIRAVDHCVEGVCSNEANPYGD
                     AQALRGLSLLTSGLPRVKADPGDIQARMDCQIGAWLSMGPLAAGVPMGASHGIGYVLG
                     AVFDLPHGHTSCIMLPAVMRWNKSVNAERQKLISAAMGHPDGDAGDLLDRFIGGLDMP
                     RSLHAVNVGPEHFDGIAKQAMGTPWVPRNPR"
BASE COUNT          810 a         1362 c         1430 g          798 t
ORIGIN      
        1 ccggcagaaa cgcggactgg cgggcggtct tgaaggcacc gaaaccgaga aaggcgtcga
       61 ggcactcgcc gaagccgaaa tcgatgaatg cggtttcaat gtcggcgggt aacgcctcca
      121 gcggttgttc ggtcgcgtcc aggccgtaac ggtcgatcat caccctgatc aattttgcat
      181 ggcgggtttc ctccaccccc tgcagagcga ccgcttcgcg caccaccgga tcggccacat
      241 ggggcgtgaa ggcatcgacg atcgccccgg cgcggcgctc ggtgtggaac acctcctgcc
      301 agaacggcac gcccctcagt cgcgccagcg ctgcgtcatc cagttccggc cagggcagcg
      361 tgtccgggtc gaaacgctcg tgcgtatcga tgaactggcg gcagaacagc tctttgtgag
      421 cgtccgagcc ggcgtcgatc ttcgtcatcc tgccctcgct gcattggagg attgcttccc
      481 cgccgagcac cgcgagaaat ctggttcggc gggcaccgcc tccgctgtca tggcttttgg
      541 tcctgcatgc ccggcatact ctgcatgccg tcatggttca tgccgccggc gcccatggcc
      601 tccacatgga ccgacaccgt gatcgaccgg gcgtgctcga aggtgagggt caggggaaag
      661 ctgtcgccag ctttcaatgg gcttttcagc cccgtcagca tgacgtggta gcccccgggc
      721 gtgaaagtga ccggcttacc cgggtcgagc gcgatccctc ccgccaccgg acgcattttc
      781 atgacgccat tgtcatggat cgtctcatgc atctcggcca tcgccgcgat cggcgtgctc
      841 acgccgacca ggcgatcggg acggccgttg tcggtcaccg tcagatagac tgcaccggtt
      901 gttgcggtgc cgggggttgc ccgagcccag acatgttcca ggctgatggc agacggatcc
      961 acagcggcga ccgtgaattg agagctgccc tcagtgttgt gcgtatcgac cgaggtcgca
     1021 cgccacacaa cggtgtaagt ggccggcggc aagggttgca gggggacgcc gaggcgcttt
     1081 gcgtcactgc ccgccagatg cgactcgccg tcatcgacgc gctggtggtt ggcgttggtg
     1141 acctcgatcg tggcgtatcg aggttcgatc gcctgggtga acgtgatcac cacctgattt
     1201 ggggtcgcgg taacagtact gttcaccggc ggcgacgcgg tttggagata ggaatgggcg
     1261 acggctaacg gggcaatcag tgccaccgcc gcgacaatcg cggccggcgc aacgagtctg
     1321 ggcatggcaa actcccgaac atgaatcgcg cggtgcgcca ggcaccgctc acggcagaga
     1381 ccgagaattc agatcaggga gggtggaccg cgtggttggg ctgcgagagc gacggcaccg
     1441 ggaggcgccg tggatcgtgg cgggatcgcg gcgcgcgcga caacaataac acgattgggt
     1501 ggcagaaatt ggcccacagg aagcgtaaaa gaaaaagcca ccagcgatac gcacagcggg
     1561 catatcagac agtcgtcggg atggtgcggc gccgtcggct cgtcgccggg aattccagtg
     1621 tggcaaattg gcgggctggc gccctccgcc agagcaaaca ttgactgcgg cacgaccgcg
     1681 ccgaaggcta gctgtgccgc gagcgccagc aggacaagaa acagaccgga agcgggaatg
     1741 cgtcgcctgg ccatcacagt cggctaatat acacaacgat gctgttgcgc aaagtactgg
     1801 gcccctgcct gacgccgatg gctggcgttg cgactgtcct caaccactct catccgcgca
     1861 attcgttcaa cgtatcgtcc agcgctcgcc ggacccgggc catgataacg tcgatttccg
     1921 cctcacagat gaccagcggc ggcgagaacg cgatacggtc accgatgaac cgggcaatca
     1981 acccgtgttc gcgcgcatat ttgtcggcaa tcgcaccgac tttcaacgcc gggtcgaacg
     2041 gcgcgcggga gtttttgtcg gccaccatct ccagcgcggc gatcatgccg acgcctcgca
     2101 cgtcgcccac caggggatga tcggcgaggc cggctgcagc ctgttgcaga tacggtccga
     2161 cctcctgcac gtgaccgagc atgtcgatct cgtcgtaaat ccgcagcact tccatcgcca
     2221 ccgctgtcgt caccggatgg ccggcataag tgaacccatg tgcaaagccg ccgagtttgc
     2281 ggctttcgtc gagcatggca tcgaagacgc gctggttgac catcaatgca gagatcggct
     2341 gcataccccc cgacaatgcc ttggcgcagg aaatcatatc cggctgcaga tcgaacgtct
     2401 gactgcccca catgttgccg gtgcggccga acccgcagat cacctcgtcg gcaatgaaca
     2461 gcatgtcgta acgccgcagc acggcctgaa tcttctccca gtacgtccga ggcggcgtga
     2521 tcccaccgcc cgcacccatc accggctcgg cgatcatggc ggcgcaggtg tcggggcctt
     2581 cgcgcaaaat cagcttttcc agttcgtcgg ccatccgcgt ggcgaattgt tcttcgctct
     2641 cgcccacttc atggcgacgg tagtagtgcg ggaattcggt gtgcagaaag ccggggaacg
     2701 gcagcccgaa gtcggcgtgc atgtcaggct tgcccgacgc cgaaatcgcc gccgaggtgc
     2761 tgccgtgata ccccatgtgc cggccgatga ttttccgctt ttccggcttg ccgattgcgg
     2821 catggtaata ccagaccaac ttgatcgcgg tatcgttcgc ctcggagccg gagcactgga
     2881 acagcacctt gctcatcggc acgggcgcga tggacagcag cttctcggcc agatcgaccg
     2941 cgttttcgtg cgtggtgcca cggtacatgt ggtagtagcc aagcttgcgc atctgctcat
     3001 acgcgacccg cgccaatcgt tccgacgcgt agccaagcga ggcgcaccac aggccggcag
     3061 ccgcatccag atagcgtttg ccgttgtcat cggtaacgaa gcagccctcg ccgccgccaa
     3121 tgacgaaagg tccctcttcc agatggcggg ccaggttggt ctgcggatgt gcgatgctcg
     3181 cgatatcgcg cgcctgcacg gaattgggag cgaggtaggt catcaggatt ccctctgact
     3241 ggctggatgc ggcaaaaacc tttatccgta cgccgggaaa acacaatgcg gccgggaggt
     3301 tcagccatgt ccactgaagg acgcgtggta ttcggcaaaa tggatgaggt cgtgttcggc
     3361 aaaccggccg ccgggcaggt cgccgagcaa acgcgccggt tgggcgcgga acgagtcctg
     3421 ctgatggtca gcggcacgct gcaccgggaa accgacgaga tcgcctggat cagggccgct
     3481 ctgggcaatc gttgcgttgg ggtgttcgac aagatgccgg cgcacacgcc gcgttcggcc
     3541 gtcattgccg cagcggcgat ggcgcgcgag tcgcaggctg acctgatcgt gaccgttggc
     3601 ggcggttcga tcactgacgg ggccaaggcg gtgcaactgt gcctcgccaa tgacattacc
     3661 acggtggaag gtctcgatgc gtgccgaggc gacgccgcat tcaggccgcc cacgatccgg
     3721 caaatcagcg ttcccaccac gctgtctgcg ggcgagtttt ccggcatcgc cggcgtcacc
     3781 aacgaggcaa cgcgggtcaa ggaattgttc cgccatccga tggtgatccc gtcggcggtc
     3841 attctggatc ccgcgctgac ggtgcacacg ccggagtggc tgttcctgtc gaccggcatc
     3901 cgtgccgtcg atcattgcgt ggaaggcgtt tgttccaacg aggccaatcc ctatggggac
     3961 gcccaggcgc tgcggggctt aagtttactg accagtggac tgcctcgggt caaagccgat
     4021 ccgggtgata tccaggcccg gatggattgt cagattggcg cgtggctttc gatggggccg
     4081 ctggcagcgg gcgtgccgat gggggcaagc cacgggatcg gctacgtgct tggcgcggtg
     4141 ttcgaccttc cgcatggcca cacgtcgtgc atcatgctgc ccgcggtgat gcggtggaac
     4201 aaatcggtca acgccgagcg gcagaagctg atttcggcgg cgatggggca cccagacggc
     4261 gacgccggcg atttgctcga tcgtttcatt ggcggtctgg acatgccgcg cagtctgcac
     4321 gcggtcaatg ttgggccgga acatttcgat gggatcgcaa agcaggcgat gggcacgccc
     4381 tgggtgccgc gcaatccgcg
//
LOCUS       DATAVD010000588         3312 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3031942, whole genome shotgun sequence.
ACCESSION   DATAVD010000588 DATAVD010000000
VERSION     DATAVD010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3312
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3031942"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..298)
                     /locus_tag="VHX39_10915"
     CDS             complement(<1..298)
                     /locus_tag="VHX39_10915"
                     /inference="COORDINATES: protein motif:HMM:NF025292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin-like domain-containing protein"
                     /protein_id="HEX3991669.1"
                     /translation="MRQLFDCYIGLMSIKCVPLLAVLLFGSIMATAQTTSIAGTWILT
                     RAEKLLPDGTRVSDYGNSPHGLVIFTSDGYYSVQIYRAERLKFSAGDKLKGTPEE"
     gene            complement(312..1277)
                     /locus_tag="VHX39_10920"
     CDS             complement(312..1277)
                     /locus_tag="VHX39_10920"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3991670.1"
                     /translation="MATRPNLDLDTLRTLVVAHDLGGLAQAADRLGRTPSAISLQMKR
                     LQDDLGTVLLRKRGRGLVLTEAGEVALAYARRILAMHDELLDTIEGGSLAGNIRIGCP
                     QDFASLLPSVLSQFAALYPLMQVELRIEGNAALAEAIEKSRIDLAVVIGHEHRSAAQT
                     VGQLDLVWIASSAFVPPQGQPLPLAVLGPQCGFRKCAIQHLEAIGMPYRIAAVSPSLD
                     GLQAALLGGLGITARTSLNLSDGLMFSASLYGLPLLGSLPVTLHRNAHLIGDAADRMA
                     TLLVEALKFMLSPRSKSDIPGKRHHGLAVVATASLAMDKPRSRVR"
     gene            complement(1458..1892)
                     /locus_tag="VHX39_10925"
     CDS             complement(1458..1892)
                     /locus_tag="VHX39_10925"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX3991671.1"
                     /translation="MLLLGGFGVLALLLASVGTYGVISFAVIQRTPEIGIRIALGAGR
                     RQILAMILSQGSRLVCVGIAVGLIGAFTATRLMTSFLYGIQPTDPVTFAAASLLLISV
                     ALAACYVRRGERRWWIHSLLCATSNLHKIRIDSTPRTGIWIR"
     gene            complement(1996..2433)
                     /locus_tag="VHX39_10930"
     CDS             complement(1996..2433)
                     /locus_tag="VHX39_10930"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3991672.1"
                     /translation="MRQAGAVAYCDSPGSDMQIRVARPTDKLNPVVAFYRDALGLAII
                     GHFENHAGYSGVMLGMPGAQFHLEFTHADAGSPCPAPTKDNLLVFYLPNAERYLSALQ
                     RMTQYGHSPVEPENPYWKAKSKTFEDPDGWRVVLYNGVPFGAR"
     gene            complement(2480..3022)
                     /locus_tag="VHX39_10935"
     CDS             complement(2480..3022)
                     /locus_tag="VHX39_10935"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX3991673.1"
                     /translation="MGERHVKADSIDEIRKQWKSARPELNSWPMAVIGRISRLERGID
                     ERMRVACAEFGIERWGFDVLATLRRAGPPFVLTPTQLYRSLLLTSGAMTNRLDRLEDA
                     GLLKRTKDPNDRRGLRIVLTSKGRDLIDRMVVVHMEVEAEMLAAIPMKQQRHLADLLR
                     LLSDSIERSNDQPSTGEHRE"
BASE COUNT          771 a          892 c          951 g          698 t
ORIGIN      
        1 actcttccgg agttcccttc agcttgtctc cagcagagaa cttgagacgc tcagcgcggt
       61 aaatctgcac agagtagtag ccatcgctgg tgaagatgac aagcccatgc ggactgtttc
      121 cgtagtccga cactcgggtg ccgtccggaa gaagcttttc ggccctggtg agaatccagg
      181 tgccagcgat ggaagtcgtt tgagcagtgg ccatgattga gccaaacagc aggacagcga
      241 gaagcgggac acatttgatc gacatgaggc caatgtagca atcgaacaac tggcgcacaa
      301 tttgattgtt ttcaccgcac tcgtgagcgc ggcttatcca ttgctaaact ggcggtggcc
      361 actacagcga gaccgtggtg gcgtttgccg ggaatgtccg actttgatcg cggggagagc
      421 atgaatttca gagcctcaac gagaagcgtc gccatgcgat cagcggcatc tccgatcaag
      481 tgcgcattgc ggtgcagagt gacaggcaag cttcccagca aaggcaaacc atagagcgac
      541 gcggagaaca tcagcccatc ggaaagattg agtgaggtac gcgccgtgat gccgaggcca
      601 ccaagcaagg ccgcctgcag accgtcgagg ctggggctga cggcagcaat gcgatacggc
      661 atgccgatcg cctcgagatg ttgaatcgcg catttcctga agccacattg cggccccaat
      721 acggcgaggg gcagaggttg tccctgcggc ggcacgaacg cggaagaggc gatccaaaca
      781 aggtccagtt ggcccaccgt ctgcgcggcg gagcggtgtt cgtgaccaat gaccacagca
      841 aggtcgattc gcgatttctc aatcgcctcc gcgagggcgg cattgccttc aatgcggagt
      901 tcgacttgca tgagcggata cagcgcagca aattgcgaca ggaccgaagg cagaagtgag
      961 gcaaagtctt gcgggcaacc gattcggatg ttgccggcga ggctacctcc ttcgatggtg
     1021 tccagcaact cgtcgtgcat ggcaagaatg cggcgcgcat aggcgagtgc aacttctcca
     1081 gcttcggtga gcacgagacc gcggccgcgt ttgcgcaaga gcactgttcc gagatcatcc
     1141 tgcagccgtt tcatctgcaa gctgatggca gaaggagtac ggccgagacg gtctgccgct
     1201 tgtgccaggc cacccaggtc gtgcgccacg acgagcgtgc gcagggtatc caaatcgaga
     1261 ttggggcgcg tggccatgcg tgtgcgtagt gtaaacgatc ggatttgctc cacgcgaagc
     1321 tacagctgca taaagtcggc caatgaccga tcgtgaattc tcacccttta tcaattgtcg
     1381 cgaacagtgc atgttttcaa cgtaaagccg ctcgatttga tacccggcga tttgtcagaa
     1441 gtcggagact gtgcgtgtca tctgatccat attcccgtgc ggggcgtcga atcgattcgg
     1501 attttgtgaa ggttactcgt agcgcagagc aatgaatgga tccaccagcg tcgctctcct
     1561 cgccgaacat agcaggctgc aagcgcaacg gaaatcagca acagggaggc agcggcgaaa
     1621 gtgacagggt ctgtcggctg aatgccatag aggaagctcg tcatgaggcg tgtcgcagta
     1681 aaagcaccaa tcaggccaac ggcaatgcca acgcaaacaa ggcggctgcc ctggcttagg
     1741 atcattgcga gaatttggcg acgccctgca ccgagtgcta tgcgaatgcc gatctcgggc
     1801 gtccgctgga tcaccgcaaa agagattacg ccatacgtgc caaccgaagc cagcagcaat
     1861 gccagcactc cgaagccgcc gagcagaagc atggcaaagc ggtcggtcgt gagtgaattg
     1921 tcgacgagtg ttgtagaagt gaaaggggtc gattgctttt tcgattcgcc tggcgacgaa
     1981 acctggtgca gaaggctaac gggcgccgaa tgggacgccg ttatagagaa ccacgcgcca
     2041 tccatctgga tcttcgaacg ttttactctt agccttccaa tacgggtttt ccggctcaac
     2101 cggagagtgt ccgtactgcg tcatacgttg gagcgcagaa aggtatcttt cagcgtttgg
     2161 tagatagaag accagaagat tgtcttttgt tggtgcaggg cagggactgc cggcatcagc
     2221 atgtgtaaat tccaaatgga attgcgcgcc aggcattcca agcatgacgc cagaatatcc
     2281 cgcatgattt tcaaagtggc cgattatggc taatccgagt gcatctctgt aaaacgctac
     2341 aactggattg agcttgtccg ttggtctggc aacgcgaatc tgcatatcgg aaccagggga
     2401 gtcgcaatat gcaacagcgc ccgcttgacg cattcctgaa cttgcgccta caagagcgcc
     2461 tgtttgaaga aatcgccgcc tattcacgat gttcacctgt ggacggctgg tcgttggagc
     2521 gctcgataga atctgacaga agacgcagca agtccgccaa gtggcgctgc tgtttcatag
     2581 ggatcgccgc cagcatctcc gcctcgacct ccatgtgaac aacaaccatg cgatcaatga
     2641 gatcgcgtcc ctttgaagtg aggactatgc gcagccccct gcgatcgttt gggtctttcg
     2701 ttctcttcaa gaggccggcg tcttccaggc ggtcgaggcg attcgtcata gcaccggaag
     2761 ttagcagaag agaacggtag agttgcgttg gagtgagcac gaaaggaggc ccggcacgcc
     2821 gaagagttgc caggacatcg aatccccatc tctcaatccc aaattccgca caagcgaccc
     2881 tcatccgttc gtcaattccc cgctccaatc gagaaatgcg tcctatgacc gccatcggcc
     2941 acgaattcaa ttccggacgg gccgatttcc actgttttcg tatttcgtcg atcgagtcgg
     3001 ccttaacgtg tcgttctccc atggtcgccc ttccgagact tccttcaaga ctaagcagtc
     3061 aattgaatta tatcttattg ccatgtatct tgatgttgag gcatatagag acgtcatgca
     3121 aacgcagttg gccgatgaac aactcccaca gaacgtcgcg acgcggcaaa gaaatctgcc
     3181 aactggtttt tcctcatggg tttggcttgg gattgcggct gtactgcttc tgttctcgaa
     3241 tggagcaacc accatacccc tcgcctcgtg gctggcacct atttttgtcc tccgatttac
     3301 ccgagggcag ag
//
LOCUS       DATAVD010000589         1743 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3593734, whole genome shotgun sequence.
ACCESSION   DATAVD010000589 DATAVD010000000
VERSION     DATAVD010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3593734"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..636)
                     /locus_tag="VHX39_10940"
     CDS             complement(<1..636)
                     /locus_tag="VHX39_10940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX3991674.1"
                     /translation="MATTAATAHDDHAHDDHAHDHPTGWRRFVYSTNHKDIGTMYLVF
                     AIVAGLIGGAMSIAIRAELMYPGIQIFHNTHTYNVFATSHGLIMIFFMVMPAMIGGFG
                     NWFVPLMIGAPDMAFPRMNNISFWLLPASFALLIISTFVEGEPGSAGAGTGWTLYAPL
                     STTGHPGPAVDFVILALHLAGASSILGAINFITTIFNMRAPGMTLHKMPLFV"
     gene            complement(743..1582)
                     /gene="coxB"
                     /locus_tag="VHX39_10945"
     CDS             complement(743..1582)
                     /gene="coxB"
                     /locus_tag="VHX39_10945"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008889196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HEX3991675.1"
                     /translation="MKMSKGQMGRRLLGLAVAGVALVTGGTAFAELGQPAPWEYKLQG
                     SASPVMDTITSFHNILLWIITLITLFVLGLLIAVVVKFNAKANPVPSKTTHNTLIEVA
                     WTLIPVLILVGIAVPSFRLLFTELDVPKADITVKVTGKQWYWSYAYPDNGKFEFDSLL
                     AADKQPRLLAVDNEMVVPVNKVVRVQTTGADVIHSFSVPAFGIKIDAIPGRLHETWFK
                     ATKVGMYYGQCSQLCGNDHAFMPIAVRVVSDQDFTAWVTTAQKKYAAVPANSFVSVAA
                     AAQ"
BASE COUNT          350 a          536 c          534 g          323 t
ORIGIN      
        1 gacgaacagc ggcatcttgt gcagggtcat gcccggcgcg cgcatgttga agatcgtggt
       61 gatgaaattg atggcgccga ggatcgacga ggcgccggcc agatgcagcg ccaggatgac
      121 gaaatcgact gccggcccgg gatgaccggt cgtcgacagc ggcgcgtaga gcgtccagcc
      181 cgttccggcg ccggcggagc ccggctcgcc ctcgacgaag gtggagatga tgagcagcgc
      241 gaacgaagcc ggcaacagcc agaacgagat gttgttcatg cgcgggaacg ccatgtccgg
      301 cgcaccgatc atcagcggca cgaaccagtt gccgaacccg ccgatcatcg ccggcatcac
      361 catgaagaag atcatgatca gcccgtgcga ggtcgcgaac acgttgtagg tatgggtgtt
      421 gtggaagatc tggatgcccg gatacatcaa ttcggcgcgg atcgcgatcg acatcgcacc
      481 gccgatgaga ccggcgacga ttgcgaacac gagatacatc gtcccgatgt ccttgtggtt
      541 cgtcgaatag acgaagcgcc gccagccggt cggatggtcg tgcgcgtggt cgtcgtgggc
      601 gtgatcgtcg tgagcagttg ctgcggtcgt tgccattttc aaatcctgcc ttcagtccct
      661 tgcagacttt gtccggacct tgcggtcccg tcgcccattg taccgtccaa gcgtcccgtc
      721 gaagcgctcc aggccttaag gcctattgcg ccgcggcggc caccgagacg aacgaattcg
      781 ccggcaccgc ggcatatttc ttctgcgcgg tggtaaccca ggcggtgaaa tcctgatcgc
      841 tcacgacccg taccgcgatc ggcatgaacg cgtggtcatt gccgcacagc tgagaacact
      901 ggccgtaata catgccgacc ttggtcgcct tgaaccaggt ctcgtggagg cggccgggga
      961 tcgcgtcgat cttgatgccg aaggccggga ccgagaagga atggatcaca tcggcgccag
     1021 tggtctggac ccgcaccacc ttgttcacgg gcacgaccat ctcgttatcg acggcgagca
     1081 gccgaggctg cttgtcggcg gccagcagcg aatcgaattc gaacttgccg ttgtcgggat
     1141 aggcatagct ccagtaccac tgcttgcccg tcaccttgac cgttatatcg gccttcggca
     1201 cgtcgagttc cgtgaacagc agccggaatg acggcaccgc gatgccgacc aggatcagga
     1261 ccgggatcag ggtccacgcc acctcgatca gggtattgtg ggtggtcttc gaaggcaccg
     1321 gattggcttt ggcgttgaat ttcaccacga cggcgatcag tagccccagc acaaacagcg
     1381 tgatgagggt gatgatccag agcaggatat tgtggaacga ggtgatggtg tccatcaccg
     1441 gcgaggccga tccctgcagc ttgtattccc acggtgccgg ctgccccaat tcggcgaacg
     1501 ccgttccgcc ggttaccagc gcaacgccgg ccaccgctaa acccagcaac cgccggccca
     1561 tttggccctt cgacatcttc atgccgttcg cgctcccatg atagtacccc tagtcgatag
     1621 gtcccccagc attccgccgt ttggcaggag atgctgcacg atccgccccc cgaacaaacc
     1681 gcctcgggat gcactctaaa ggacacttca tgaagtgcac ttcagaaata cctgggccag
     1741 atc
//
LOCUS       DATAVD010000590         1667 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1731233, whole genome shotgun sequence.
ACCESSION   DATAVD010000590 DATAVD010000000
VERSION     DATAVD010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1731233"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1667)
                     /locus_tag="VHX39_10950"
     CDS             complement(<1..>1667)
                     /locus_tag="VHX39_10950"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEX3991676.1"
                     /translation="LVHPDVLFETDKQGKPNWEFTPAKTLEGPTGVTPSVPQTSPTRI
                     SIVEAQIEDGTFTLRDDASGASTVLNVKVLKATAATSGSNMQVAGEASFDGIEVVLDG
                     EVGPLSRLQDPADATPWPMRMSLAAAGAKIAVDGALVHAVKGNGFQFKLTGSIPDLAA
                     LSAPGHATLPAIKLIAFEGDVHNVTDASGSGIALTGLKLSLPQADLTGDARITPGSRP
                     SIQATLSSTRIDGDALLAAFNPPAAKAVSGTPATPLPARRDRMFGDTPIPFDLLRLVN
                     ADVTFNASELKYGGAQYRSITQHIALHDGVLRLDPFAADLPEGHLSGSLMVDATATPA
                     AITLHLHAPGLAIAPVLTVIGMPGSANGNVEVYADLSGAGGTPHDIAAGLNGSLGLAM
                     ANGTVGNQLLSRTLGEILRAVSLLDFAERGGVSQVQCATARLELTRGVGTLRTLLLSS
                     TLLIIDGDGSVNVGAETLNLRIRSRKQIADTNVVVPLRVNGGWRSPSVSPDPTATVAD
                     NVEAVAGAVIGPNSPLGLAAGALGADKLIKRVFGAPEDCQTSLAIAR"
BASE COUNT          314 a          540 c          500 g          313 t
ORIGIN      
        1 cacgcgcgat cgcgagcgac gtttgacaat cctccggcgc gccaaatacc cgtttgataa
       61 gcttgtcggc acccagcgca ccggcggcca gcccaagcgg cgagttcggg ccgatcactg
      121 cccccgccac ggcctccacg ttgtcggcta cggtggcggt cggatccggt gacaccgacg
      181 gcgaacgcca tccgccattc acccgcagcg gcaccacgac gttcgtatcg gcgatctgct
      241 ttcgcgaccg aatgcgcaaa ttcaaggtct cggcgccgac gttgaccgag ccatccccat
      301 cgatgatcag cagcgttgaa ctcagcagca aggtgcgcaa cgtgccgacg cctcgggtca
      361 gttccagccg cgccgtcgca cattgaacct gactgacgcc gcctcgctcc gcgaagtcca
      421 acaggctgac cgcacgtagg atttctccaa gcgttctact gagcaattga ttccccacgg
      481 tgccgttggc catcgccagg ccgagcgatc cgttcagacc ggctgcgatg tcatgcggcg
      541 tgccgccagc gccactcagg tccgcataca cttccacatt cccgttggcg gaacccggca
      601 tcccaatcac ggtcaatacc ggggcaatcg cgaggccagg cgcatgcagg tggagtgtga
      661 tcgcggccgg tgttgctgtg gcatcgacca taagactgcc gctgagatgt ccttcgggca
      721 ggtcagcggc gaatgggtcg agccgtagca cgccgtcgtg cagggcgatg tgctgtgtga
      781 ttgagcggta ttgagcacct ccgtatttca attcggaggc gttaaacgtc acgtcggcat
      841 tgacgagacg cagcaggtcg aacgggatcg gcgtgtcccc aaacatgcga tcgcgccttg
      901 ccggcaatgg tgtggctggt gtcccgctca cagccttcgc cgccggcggg ttgaacgcag
      961 cgagcagagc gtcgccgtcg atcctggtcg acgacagcgt ggcctgaatc gatggccgcg
     1021 aacccggcgt gatcctggcg tcgccagtaa gatcggcttg cggcaacgac agtttcaggc
     1081 cggtgagtgc gatacctgag ccagacgcat cggtgacgtt atgcacgtcc ccttcaaaag
     1141 ctatcagctt aatggccggc agagtggcat gcccaggagc cgaaagtgct gcaaggtcgg
     1201 gaatgctgcc ggtaagtttg aattgaaagc cgttgccctt cactgcatgg accaaagccc
     1261 cgtccacagc gattttcgcc ccggccgcgg ccaaactcat ccgcatcggc catggcgtgg
     1321 catccgccgg atcttgcagg cggctcagcg gaccgacctc gccatccaaa acaacttcga
     1381 ttccgtcaaa gctggcctcg ccagcgacct gcatgttcga tcccgatgtc gcagcggtgg
     1441 ctttgagtac cttcacgttg agcacggtgc ttgcgccact ggcatcatcg cgcaaggtga
     1501 acgtgccatc ctcaatttgc gcctcaacga tgctgatccg cgtcggcgac gtctgcggaa
     1561 cagatggtgt cacgccggtt ggcccctcga gagtcttcgc cggagtgaat tcccagttcg
     1621 gcttcccctg cttatcggtc tcgaacaaaa cgtcgggatg caccagc
//
LOCUS       DATAVD010000591         1877 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3032196, whole genome shotgun sequence.
ACCESSION   DATAVD010000591 DATAVD010000000
VERSION     DATAVD010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1877
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3032196"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..329
                     /locus_tag="VHX39_10955"
     CDS             <1..329
                     /locus_tag="VHX39_10955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991677.1"
                     /translation="FWRGTDAAKNGHRKDQTMKETRTYPLRLPRSLKEAVEKLSREDR
                     TSINQFVSTAVAEKVSALQTARFFTDRKARSDFEAFDKIMRRRGGQEPREGDDLPSPT
                     KTTRRS"
     gene            335..1336
                     /locus_tag="VHX39_10960"
     CDS             335..1336
                     /locus_tag="VHX39_10960"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX3991678.1"
                     /translation="MPTTYSAVMLTRKGGTEALQIVDLPLEAPGPGQLRVRIRAAGVG
                     STDLIILAGKYRFAPKIPLVPGYEAAGVVDAIGSGVTGFRVGQHVAALTVYGAFAEYI
                     TREAEHFVPVPDGVSDQDAAAVVLNFGTAWQMIHRVAKMRADQTALVTGAAGGVGIAA
                     LQILRLAGVKAYGAASAAKHATVRALGATPIDYRAGPLDRLVRALEPDGVDYAFDAIG
                     GANIGPCIGAVKRGGTVVGFGFMGAPGTLAQGAMFANLFLGARLRGRRGTFYGITLLY
                     RKNPQPLREDLTAIFKLLAEKKLDPMVSHTFPILEAAKALDLQATGSVTGKIVLVGA"
     gene            1381..1641
                     /locus_tag="VHX39_10965"
     CDS             1381..1641
                     /locus_tag="VHX39_10965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991679.1"
                     /translation="MPDSHDTPISIWFFIGLLLDVYGVLILGASLHDLAVPPEHPVVL
                     ANLHAGIWWGAVLIVLGLVYTYVFLPSRHAARDRAVRNGEVR"
     gene            1638..>1877
                     /locus_tag="VHX39_10970"
     CDS             1638..>1877
                     /locus_tag="VHX39_10970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="fucose isomerase"
                     /protein_id="HEX3991680.1"
                     /translation="MTFGLLVGNRGFFPAHLVTSGREQIIAILQGLGHRVICPTPEQT
                     KYGAVESRADAKACAALFAAHRGEIEGIIITLPNFG"
BASE COUNT          325 a          605 c          584 g          363 t
ORIGIN      
        1 cgttttggcg tggaactgat gctgccaaga acggccatcg aaaggatcag acgatgaagg
       61 aaactcgaac ttaccctctg cggcttcccc ggtctttaaa ggaggcggtg gaaaagctca
      121 gccgggagga tcgcaccagc atcaaccaat ttgtgtcgac tgcggttgcc gagaaggtgt
      181 ctgcactcca gaccgcccgg ttctttaccg accgaaaggc acgatcggat ttcgaggctt
      241 tcgacaagat catgcgccgg cgcggtggac aggagcctcg tgaaggcgat gacctgccgt
      301 cgccgactaa aacgacgcgc cggagctgac acacatgccc accacttata gcgctgtaat
      361 gctgaccaga aaaggaggaa ccgaggctct tcagatcgtg gacctgccgt tggaggcgcc
      421 ggggccgggc cagcttcgcg tgcggattcg cgccgccggc gttggttcca ctgacctgat
      481 tatccttgct ggaaaatatc gcttcgcgcc gaagattcct cttgtacccg gttatgaagc
      541 cgccggcgtg gtggatgcga tcggatccgg cgtgaccggc ttccgtgttg gccagcacgt
      601 tgccgcgctt accgtgtatg gagcgtttgc cgaatacatc acccgtgaag cggagcattt
      661 cgtgccggtc cccgatggcg tctccgatca ggacgccgcc gcggtggtgc tgaacttcgg
      721 tacggcgtgg cagatgattc atcgcgttgc caagatgcga gccgaccaga cagcgttggt
      781 taccggagcg gccggaggcg tcggcatcgc agcgttgcaa atactgcggc tcgcgggcgt
      841 gaaagcttac ggcgcggctt cggcggcgaa gcatgcgaca gttcgggccc tcggcgcgac
      901 cccgatcgac tatcgcgccg gccccctcga ccgcctggtc cgcgccctgg agcctgacgg
      961 cgtcgactac gccttcgacg ccatcggcgg cgccaacatc ggcccctgca tcggcgcggt
     1021 gaagcgcggg ggaaccgtgg ttggcttcgg tttcatgggc gcgcccggaa cccttgccca
     1081 gggagccatg ttcgccaatc tgttcctggg ggcgcgcctg cgcggaaggc gaggtacatt
     1141 ctacgggatc acgttgttgt accgtaagaa tccgcagccg ctgcgtgagg atctgaccgc
     1201 gatcttcaag ctcctcgcgg aaaagaaact cgacccgatg gtctcgcata cgttcccgat
     1261 tctggaagcc gccaaggctc tggaccttca ggccacgggc tcggtgaccg gcaaaatcgt
     1321 ccttgtcggc gcctgagtga ctgagctgac ccgcatgcta tcctgtcggg tgccctcgcc
     1381 atgcctgaca gccacgacac gcccatttcc atctggttct tcatcggcct gctcctcgac
     1441 gtctacggcg tcctgatcct cggcgccagt ctgcatgacc tcgccgtgcc gccggagcac
     1501 ccggtagtcc tcgcgaatct ccacgccggc atctggtggg gcgcggtgct gatcgtgctc
     1561 gggctggttt acacctacgt cttcctgccc tcccgccatg ccgcccgcga ccgggctgtg
     1621 cgcaacggag aagtccgatg acgttcggac tgctggtcgg caaccgcggc ttctttccgg
     1681 ctcatctggt cacctccggc cgcgagcaga tcatcgcgat tcttcagggt ctgggccatc
     1741 gcgtgatctg ccccactcct gaacagacca aatacggagc cgtggaatcg cgcgcggacg
     1801 ccaaggcctg cgcggcattg ttcgccgccc atcgcggcga aatcgagggc atcatcatca
     1861 cgctgcccaa tttcggc
//
LOCUS       DATAVD010000592         3428 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3032244, whole genome shotgun sequence.
ACCESSION   DATAVD010000592 DATAVD010000000
VERSION     DATAVD010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3428
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3032244"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..1359)
                     /locus_tag="VHX39_10975"
     CDS             complement(139..1359)
                     /locus_tag="VHX39_10975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3991681.1"
                     /translation="MQISRRTILGAAPVAAIAAVGRTRAQARPVIRIGVINDQSGPYR
                     DVNGPTSIACTKQAVLEFAAGSFDVEVLTADHQNKPDLGAAITRQWIDQDGVDFIQDG
                     ASSAAALAISSICKDRNKVFIPTSTATSDLTGKACSPNTIHWVYDTYMEARSTGGAMV
                     KAGGDSWFFITPNYAAGIAFQRDTTRFVEANGGKILGSRLYPFPDTSDFSAPLLEAKT
                     SGAKILGIAGAGSDLINIVKQAHEFAVQKTMNLAALIAYSTDVHSIGLVTAQGLRLSE
                     TYYWDLNDRTRSFQNRIKDKVTLWPNMSQAGNYSCTLHYLKAVTSMGAAAAKADGAAT
                     VARMKAIPTDDDCFGTGRIREDGRKVHPVYLFEVKQPSESRHEWDLYKLVATTPADEG
                     WRPLAEDGCPLVKA"
     gene            complement(1465..2295)
                     /gene="rsmA"
                     /locus_tag="VHX39_10980"
     CDS             complement(1465..2295)
                     /gene="rsmA"
                     /locus_tag="VHX39_10980"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011251888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEX3991682.1"
                     /translation="MSEIAMPPLREVIAAHGLDARHSLGQHFLLDGNLAARIVRAAGD
                     MTGRNVIEVGPGPGGLTRALLASNAARIVAIELDRRAVAAMAELAGSLNTRGKPERLT
                     VIEADALQVDLPGLVPGPRQIVANLPYNVASPLLVRWLRQASEFEQMTLMFQREVAER
                     IVAAPGTAAYGRLSVLAGWICEGHIALRLPPAAFVPPPKVWSAVVVLRPHVGQPEPAL
                     FAAMERLTAAAFGQRRKMLRGALRQLGGEALLAAAEIAPERRAETLSIAEFDRLARLL
                     "
     gene            2396..>3428
                     /gene="lptF"
                     /locus_tag="VHX39_10985"
     CDS             2396..>3428
                     /gene="lptF"
                     /locus_tag="VHX39_10985"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HEX3991683.1"
                     /translation="MRFLLQPTRLDRYIFRQLFWALIAVTAGLTALIWLTQSLRFVEL
                     VVNRGLSLLVFMQLTGLLIPSFIAVILPITTYVVIQFIYQRLAGDREVTVMRAAGLSP
                     FALARPALALALVATIVGYWLNLSVVPNTLASFREFQWEIRNKVAAFLLQEGVFTSIS
                     DKLVVYVRRRTPDGSLHGILVDDARDPAVHATILAESGQLVEGKNGPRVLLMNGSRQE
                     IDHQTGRLDMLTFSQNELDLSDASGPEGERPADMSEVGLGDLFNPRLALPRDVPKWIA
                     EAHKRLASPLASISYALVALVSVLTGAFQRHGGFLRPLGSVVTVVVLVALGLTIDGLA
                     ARDNALIPLI"
BASE COUNT          592 a         1104 c         1047 g          685 t
ORIGIN      
        1 tgcaatggct ggctcatcgt tacctcatca gctttttggt cgagccacaa ccgccggcct
       61 gaatggtaga cgttcgccgc acgaccggta ttccgggcag cccggaaacc gacggcgctg
      121 gcgtgcgtcc tggcatcatt acgccttgac cagcgggcag ccgtcttctg cgagcggccg
      181 ccatccctcg tccgccgggg tcgtcgcgac cagcttatac aggtcccatt cgtgcctgct
      241 ttcggacggc tgcttgacct cgaacaagta gaccggatgg accttccgcc catcctcgcg
      301 gatccgccca gtaccgaaac aatcgtcatc ggtggggatc gccttcatgc gagcgaccgt
      361 cgcggcacca tcggctttcg ccgcagccgc gcccatcgac gttacggcct tcaggtaatg
      421 cagcgtgcaa gagtaattcc cggcctgcga catgttcggc cacagcgtca ctttatcctt
      481 gatccgattt tgaaacgacc tcgtgcggtc attcaggtcc cagtagtacg tctccgacag
      541 ccgcaaccct tgcgcggtaa ccagcccgat cgagtgcacg tcggtggaat aggcgatcag
      601 cgccgccaga ttcatggtct tctgcacagc gaactcgtgc gcctgtttga caatgttgat
      661 cagatcgctg ccggcgccgg cgatgccgag aatttttgcc cccgaggtct ttgcttccag
      721 caacggcgcc gagaaatccg aagtatccgg aaacggatac agcctgctgc cgaggatttt
      781 accgccattg gcttcgacga agcgggtggt gtcgcgctgg aacgcaattc cggcggcata
      841 attcggcgta atgaagaacc agctgtcacc gccggccttc accatggcgc caccggttga
      901 ccgcgcctcc atgtatgtat cgtaaaccca atgaattgtg ttcggcgagc aggccttgcc
      961 ggtcagatcc gaggtcgcgg tactggtcgg aatgaacacc ttgttgcggt ctttgcaaat
     1021 tgagctgatc gccaatgcgg cagccgaaga agcgccatcc tggataaaat ccacgccatc
     1081 ctgatcgatc cactgcctgg taatcgcggc gccgagatcg ggtttgttct gatggtcggc
     1141 ggtcagcacc tccacgtcga aactaccggc ggcgaattcc agcacggctt gttttgtgca
     1201 ggcgatgctg gtggggccgt tgacatcgcg atacggaccg gactgatcgt tgatgacccc
     1261 gatgcggatg actggccgag cctgcgcgcg ggttcggcca accgccgcga tggccgcaac
     1321 cggggcggcg ccaaggatgg tccggcgact gatttgcatg gtgtagcgtt tccctcagat
     1381 gcgctctgcc ggcgcgttgt gcggccaacc ggccgtttcg ctcagtctgg cacgatttcc
     1441 gtcgctgttg agagtccggt cggttcacag caggcgcgca agccggtcga actccgcaat
     1501 gctgagcgtc tctgcccgcc gttccggcgc gatctcggca gctgccagca acgcctcacc
     1561 gccaagctgc cggagcgcgc cgcgcagcat cttgcggcgt tggccaaatg cggcagcggt
     1621 cagcctttcc atggcggcga acaatgcagg ctccggctgc ccgacatggg ggcgcaacac
     1681 gacgaccgcg gaccagacct tgggcggcgg cacaaaggcc gccggcggca gccgtagcgc
     1741 gatgtggccc tcgcaaatcc agcccgccaa caccgacaac cgtccatacg cagcggtgcc
     1801 aggtgcggcg acaatccgct ctgccacctc gcgctggaac atgagagtca tttgctcgaa
     1861 ttcactggcc tggcggagcc agcgcaccaa cagcggcgag gcgacgttat acggcaaatt
     1921 ggcgacgatc tggcgcggcc ccggcacgag gcccggcaaa tcgacctgca gcgcgtcggc
     1981 ctcgatcacc gtcaatcgtt cgggtttgcc gcgggtgttc agcgacccgg cgagttcggc
     2041 cattgccgca acggctcgtc ggtcaagctc gattgcgacg atacgggccg cattgctggc
     2101 cagcaaagcc cgggtcagcc cgcccggacc aggcccaacc tcgatgacgt tacgccctgt
     2161 catatcgccg gcagcccgca cgattcgcgc ggccagattg ccatccagca ggaaatgctg
     2221 gcccagagag tggcgcgcat ccaacccatg cgccgcaatg acctcgcgca gcggcggcat
     2281 tgcaatttca gacatgtcga cgcggcggcc gggtgagcct ggcgaagcct cggcggcgcc
     2341 tcatactttc caggcccggg ttgcatcgct ccgtcgtgtg ccgcagaaac tgcccatgcg
     2401 tttcctgctc cagcccacaa ggctcgaccg gtatattttc cgtcagctct tttgggcgct
     2461 gatcgcggtg accgccgggc tgacagcgtt gatctggctc acgcaatccc tgcgatttgt
     2521 tgagctggtg gtgaatcgcg gcctctcttt gctcgtgttc atgcagttga ccgggctgtt
     2581 gatccccagt ttcatcgccg tcattctgcc gattaccacc tatgtggtga tccagttcat
     2641 ctatcaacgc ctggcgggcg atcgtgaagt gaccgtgatg cgcgccgccg gtctttcccc
     2701 gtttgcgctg gcgcggccgg cactggcgct ggcgttggtc gcgaccatcg tcggctactg
     2761 gctcaacctg tccgtggtgc ccaacacgct ggcgtcgttt cgcgagtttc agtgggaaat
     2821 ccgcaataag gtcgcggcat tcctgttgca ggagggcgtg ttcacctcaa tttccgacaa
     2881 gctcgtggtc tacgtgcgcc gacgcacgcc ggacgggtcg ctgcacggca tcctggtcga
     2941 cgatgctcga gatcctgctg tccacgccac catcctcgcc gagtcggggc aattggtcga
     3001 aggcaagaac ggcccgcgcg tattgttgat gaatggcagt cgtcaggaga tcgatcacca
     3061 aaccggccgg ctggacatgc tgaccttctc gcaaaacgaa ctcgatctga gcgacgcctc
     3121 cggccccgaa ggtgaacggc ccgcggatat gtcggaggtc ggactgggcg acctgttcaa
     3181 tccgcgactc gcattgccac gcgacgtgcc gaaatggatt gccgaggccc ataagcggct
     3241 cgccagtccg ctggcgtcaa tttcctatgc attggtggct ttggtctcag tgctgaccgg
     3301 ggcgtttcag cgccatggcg gtttcctgcg tccgttgggc tcggtggtca ccgtcgtggt
     3361 tctggtggca cttggcctga ccatcgacgg tctggcggca cgcgacaacg cgttgattcc
     3421 cctgatct
//
LOCUS       DATAVD010000593         7022 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_427264, whole genome shotgun sequence.
ACCESSION   DATAVD010000593 DATAVD010000000
VERSION     DATAVD010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7022
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427264"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2382
                     /locus_tag="VHX39_10990"
     CDS             <1..2382
                     /locus_tag="VHX39_10990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991684.1"
                     /translation="SFNGNGWFIDLSSLSDGSLLASAVAATIGLRLGGDAITPETIGR
                     AIGQTKLFLVLDNCEHIIEEASSLADVIVRFCRHVSILSTSRETLQVGGEYVYRVSPL
                     TTPSGENQKPDTILGYTAVQLFIARTQSLRSDFSPDNVAISRIGSICERLDGIPLAVE
                     FASACAAAIGLQEIEDRLADRFGLLTGGRRTAPPRHQTLAATLEWSYQLLPEWERLLL
                     RHLAVFRGGFTLEAAISVVGNGLAAPSDVVKGIRNLVTKSLVATEGTSGVDRLRLLET
                     TRAYAGRELDAKGETQSARKNHAHYFRDLLALAATGSQASRSIPPIIEHSREIDNVRV
                     ALEWAFSSAGEPAVGVALTALYAPVWLYLSLLRETKERVEHALANLGSQLDSPLMIRM
                     KLQIALGLALIFTMGPMTRIRSAITFALQAARDLNDEDTELQTLWALWILDTGIEEIR
                     VGQSTVERFEQLARRVGDPGLVAFADRLAGYTLHLAGEHKNAEYRFRQVINAPSVPTG
                     QRYTILNFDHRAVSRAGLAVTLCLQGFVDQAIDESQASLREALASRHLVSTCEVIRLA
                     AFPIAVMTLDFAAAEQAIAMLVDVATSQNGTYWIILGQFLKGELAVRQGEFASGVALL
                     RNAFDLCSENGWASRHSQFLTVLAEGLACLGRLNEALLTVDTALARAQRGGELFYAPE
                     ILRTKGELVLKNGVPGSAVAAEHCFLGAINMARQQGALLWGLRATSSLARLKAQHGRR
                     EEARSELSLIYEEFTEGFESGDLRAARSLLCDLLADKPIVRVLPSSGRGRHRE"
     gene            complement(2428..3342)
                     /locus_tag="VHX39_10995"
     CDS             complement(2428..3342)
                     /locus_tag="VHX39_10995"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3991685.1"
                     /translation="MSGTTRLILLGYLACAQCLCTALPALADAPELVAQGFGFVEGTI
                     FVGNDLYFVDYNSSRVLRVRDGQVHTVWREDGCGANGLTELGGELLVACYDNGTVAMI
                     SMDGVFLQRTREDRAGNRFVAPNDFAVDAKGGVYFSTSGSGDAVLGRVFYRRPDGVVL
                     DVADGIRDANGLVVSLDGSTLYLAASADQRLMTFPIAPDGTLGSRRPFVDLAATLEGD
                     GAERHTPEGVRMDHNGNLFVGLFDGGGFAVLDPTGKLLKMVHVPGAYHANLAISPDGK
                     SVYTTAVFLESDGSARGEILRVANPEAE"
     gene            complement(3615..4445)
                     /locus_tag="VHX39_11000"
     CDS             complement(3615..4445)
                     /locus_tag="VHX39_11000"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3991686.1"
                     /translation="MVDGISLFYREAGDPRKPTILLLHGFPSSSFMFRDLIPLLSSQF
                     HLVAPDYPGMGYSEAPPASKLTVTFDNVAGVVGDFVAQQHLTRYILYMQDFGGPVGMR
                     LALKHPEQVAGLIIQNTPVSLDGWVPARLKAVEANAGPTTPEKRAAAEARVVEATAIQ
                     LHQAGAAHPERLNPDSWADDAFALSDPEKRRIMTDLQLDIPTNLKLYPSWQDYIRTRK
                     PRTLVVWGRNDPIFAAAGAETIKKLNPAAEVHLYDTGHFALNEESVDIAAQIRRFFAH
                     "
     gene            5001..5690
                     /locus_tag="VHX39_11005"
     CDS             5001..5690
                     /locus_tag="VHX39_11005"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019172 - glyoxalase III activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HEX3991687.1"
                     /translation="MKVLFIISSSDTAFWLSEVTHPYWHLTERGIEVDFASPLGGKVV
                     YDPYSDPYFEHSTEAEDLVSKGFLSDKNLVAKLETTLKLKDVDLARYDAVHVAGGRGA
                     TFDLYPNEDVARVLEYFWAKEKVVGAICHGAIALGNLPDRVRGRRTTGYTLEGDQELQ
                     RMFGSGFVIPHFPQTVLEEVGSIYSRVAPNDPYVIRDGKLVTGQNQQSASEYALVLLH
                     AMTGESPVSAS"
     gene            5875..6162
                     /locus_tag="VHX39_11010"
     CDS             5875..6162
                     /locus_tag="VHX39_11010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013596204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muconolactone Delta-isomerase family protein"
                     /protein_id="HEX3991688.1"
                     /translation="MLFHVAITVRIPHDVDPEKIKQLGVQEHERAAELQRQGKWLHLW
                     RVVGKFANVSIFKVESPAELNEILESMPLHPYMEVEVTALCRHPGSLAEVN"
     gene            6316..6813
                     /locus_tag="VHX39_11015"
     CDS             6316..6813
                     /locus_tag="VHX39_11015"
                     /inference="COORDINATES: protein motif:HMM:NF033587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HEX3991689.1"
                     /translation="MTRRRQAVQGRQDRPFKGRQFSAEVILWAVRWYLLFPISYRDLE
                     LMLLDRGVEVDHTTIFRWIQAYAVELEKRLRPHLRVSNGSWRVDETYVRVKGRWMYLY
                     RAVDSRGQTIDFLLSAKRDAEAAKRLFRKALAQPHTVNPRTIRDRLKPGGVHSGSVAT
                     GWSVG"
     gene            6810..>7022
                     /locus_tag="VHX39_11020"
     CDS             6810..>7022
                     /locus_tag="VHX39_11020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HEX3991690.1"
                     /translation="MRWRVMLELVGEDGTVSVRELGGGATVAEYAPRTIGLTLAEGKQ
                     ILAETQRCLVQAQTADHCRRRRVCQRC"
BASE COUNT         1407 a         2049 c         2141 g         1425 t
ORIGIN      
        1 agttttaatg gaaatggctg gttcatagac ctgtcttctt tatctgatgg aagccttctc
       61 gcctcagcag tcgcggccac catcggcctc aggttgggag gcgacgccat aacgcccgaa
      121 accatcgggc gggcgatagg acaaacgaaa ctattcctgg tcctggacaa ctgtgagcac
      181 atcatcgagg aagcgtcgtc actcgcggat gttattgtgc gtttctgccg gcatgtgtcg
      241 atactttcca cgagccgcga gaccttgcag gttggcggcg agtatgtgta tcgcgtttcg
      301 cccttgacga caccgtccgg cgaaaaccag aaacccgaca cgattctcgg atacactgcc
      361 gttcagcttt tcattgctag aacccaatcg ttgcgctcgg acttctcgcc ggacaacgtc
      421 gctatttccc gaatcggatc gatctgtgag cgcctcgatg gcataccgct ggccgtcgag
      481 tttgcttcgg catgtgccgc ggcaatcgga ctccaggaga tcgaggatcg tttggcggac
      541 cgctttggtt tactgacggg cgggcggaga acagcgccac cacgtcatca gactttggcg
      601 gcaacgctag aatggagtta ccaacttctt cctgagtggg agcgattatt actgcgtcac
      661 ttggcagttt tccgcggcgg tttcactctg gaggccgcca tctcggttgt cggcaacggc
      721 ttggccgcgc cgtccgacgt ggtgaagggg atcagaaacc tcgtcacgaa gtcgctcgtc
      781 gcgacagagg ggacatccgg cgtcgaccgg ttgcggctgc tggagacaac acgggcttat
      841 gcaggccggg aactggacgc gaagggggaa acccaatcag cccggaagaa ccacgcccat
      901 tatttccggg atcttctcgc gctcgccgcg acaggctcgc aagcctctcg ctcaattcct
      961 ccgatcattg aacatagtcg agagatcgac aacgtacggg tcgcccttga gtgggctttt
     1021 tcttccgccg gagaaccggc cgtcggcgtc gccctcactg ccctttatgc acccgtgtgg
     1081 ctgtatttgt cgctgttacg agaaaccaag gaacgcgtgg aacacgcgct ggcgaacctc
     1141 ggctcccaac tcgattcacc gctgatgata cgaatgaagc tacagatcgc gctcgggttg
     1201 gcactgatct tcacgatggg gccgatgacg aggatcaggt cggcgatcac gtttgctctg
     1261 caggcggcgc gggacctcaa tgacgaagat accgagttgc agactctgtg ggcgttgtgg
     1321 atattggata ccggcatcga ggagattcgc gtcgggcagt cgacggtcga gcgatttgag
     1381 caattggcgc gtcgcgtcgg cgacccgggc cttgtcgcat ttgccgatcg gctcgccggg
     1441 tacaccctgc atctggcggg cgagcacaag aatgccgagt accgtttcag acaggtcatc
     1501 aatgcgcctt ctgtcccgac tggccagagg tatacgatac ttaatttcga tcatcgtgca
     1561 gtctcgcgcg cgggcttggc ggtgacgctg tgtctccaag gtttcgttga tcaggccatc
     1621 gacgaaagtc aggcaagcct tcgcgaggct ttggcatcaa ggcatctcgt ttccacctgc
     1681 gaggtcatac gtctcgctgc ttttcccatc gcggttatga ctctggattt cgctgccgca
     1741 gaacaggcaa ttgcgatgct ggtggacgtt gcgacaagcc agaatgggac ctactggata
     1801 attctgggac agttcctgaa gggtgaactg gcggtcaggc agggggagtt cgcgtcgggc
     1861 gtcgccttgc tccggaacgc cttcgatctg tgcagcgaga atggctgggc ttcgcggcat
     1921 tcgcaatttc tgaccgtgct tgctgaaggc ctggcatgtc tcggacgcct gaacgaagcc
     1981 cttctgaccg ttgatacggc tcttgccagg gcgcagcgcg gcggcgaact cttttacgcc
     2041 ccagagattc ttcgcaccaa gggagaactg gtcctcaaaa atggtgtgcc cggctccgcg
     2101 gttgccgccg agcactgctt tctgggggcg atcaatatgg caaggcaaca gggcgcatta
     2161 ctctggggac tgcgggcaac gtcgagtttg gcacgattga aggcgcagca cggccggcga
     2221 gaggaagcgc gatcggagct ttcgctgatc tatgaagagt tcaccgaagg gtttgagtct
     2281 ggggatctcc gtgcggcgag aagcctgctg tgcgaccttc ttgccgacaa gccgattgtc
     2341 cgcgtacttc cgtcgtcggg acgcggtcgc caccgggaat aattcggaac gcgcgacggg
     2401 ctagcgtcgc cggtctcgcc gtccgctcta ttcggcttcg gggttcgcga cccgcagaat
     2461 ctcgccgcgc gcacttccgt cggattcgag gaaaacggct gttgtataga ccgattttcc
     2521 gtcaggagag atggcgagat tcgcatgata cgcgccaggc acatgcacca tcttgagcag
     2581 cttgccggtc gggtcgagga cggcgaaccc gccgccgtcg aaaagtccga cgaacaggtt
     2641 accgttgtga tccatccgta cgccctccgg cgtatgtcgc tcggccccgt cgccttccag
     2701 cgtcgcggcc aaatccacaa atggacgcct gctacccagg gtgccgtcgg gcgcgatcgg
     2761 gaacgtcatc aatcgctgat ccgcgctggc ggcgagatac aacgtgctgc catcaaggga
     2821 cacgaccagt ccgttggcgt ctcggatacc gtcggcgaca tcgagcacga cgccgtccgg
     2881 acggcggtag aacactcttc cgaggaccgc atcacccgaa ccggacgtgc tgaaatagac
     2941 gccccctttc gcatctacgg caaaatcatt cggtgcgacg aagcggttcc ccgcgcgatc
     3001 ttcccgggtg cgttggagaa aaacgccatc catcgagatc attgccacag tgccgttgtc
     3061 atagcaggcg acgagaagtt ctcctcccag ttcggtcagc ccgttggctc cgcagccatc
     3121 ctctcgccag acggtgtgaa cctgaccgtc ccggacccgg agcactcggg atgagttgta
     3181 gtcgacgaag tagagatcgt tgccgacgaa aatcgtgcct tccacaaaac cgaacccctg
     3241 tgccaccaac tccggcgcgt cggcgagcgc tggcagggcc gtacagagac attgagcgca
     3301 ggctaggtat ccgagaagaa tcagccttgt cgttccgctc attacagacc ctttggttgt
     3361 catcgatggc cgcttccttc cgcgagcggc gtcacgcttc ggtcgaagcc ccgatgcgcc
     3421 ggcgccggaa aatccgcggg ggcacgcttc ccgggcgacc gctaatcgat cacgtcaagt
     3481 cttctatggc aacggcactt cgtcagccaa gtcgatcggg acgtagcccc actcccgcgc
     3541 aacgtcctta gaggcacgat aaccattccc cgtcggccac atctggggcc gccaaagccc
     3601 cggggccggt tggatcagtg ggcgaagaac cggcggatct gggcggcgat gtcgacgctt
     3661 tcctcgttca acgcgaagtg tccggtatcg taaagatgca cctccgcggc cgggttcagt
     3721 tttttgatgg tttcggcgcc ggcagccgca aagatcgggt cgttacgacc ccagacaaca
     3781 agtgtgcgcg gcttcctggt tcggatatag tcctgccacg acgggtacag cttaaggttg
     3841 gtcggaatat ccaattgcag atccgtcata atgcgcctct tctctggatc agacagcgcg
     3901 aacgcatcat ccgcccagga gtccgggttg agtcgctctg gatgagcggc tccggcctgg
     3961 tgcaactgaa tggccgtcgc ctcgaccacc cgggcctctg ccgcagcgcg cttctcgggt
     4021 gtggtggggc ccgcattcgc ctccactgcc ttcagccgag ccgggaccca accgtcaagg
     4081 gaaaccggcg tattctggat gatcagcccg gcgacctgtt ccggatgctt caaggccagg
     4141 cgcataccga ccggaccacc gaaatcctgc atatagagga tgtagcgggt cagatgctgt
     4201 tgggccacga agtccccgac gacccctgca acgttatcga acgtgacggt caactttgat
     4261 gctggcggcg cttcactata gcccatgccc ggatagtcgg gcgcgacaag atggaactgg
     4321 ctggacagca gtgggatgag gtcccgaaac ataaacgagg acgacggaaa cccgtggagc
     4381 agcaggatgg tgggcttacg cgggtctccg gcttctcgat agaagagact gatgccatcg
     4441 accacggcat gccgatattg gacggcgtcg gcggcatgtg cgtgcctgac ggacaggccg
     4501 aggcacatca cgaccgagag gatggttatc cgccacaatc cctggtgtcg catgagatca
     4561 gtttccacga tggttcccgg aatgattaac gcccgcggtc attacgaacg gctaccccag
     4621 aagcttcatt ggacaacgtt ccgagagcaa tcagacatgg gtttcgggaa acctatacct
     4681 tcgtacgatt tgtgggctga tgagacctgt gcgcgctggg gttgatctgt tcggaattga
     4741 gcgcttcgac tcgccgggat gtgctgcgac attgttgtcc tgtcctgtcc tgccctgcct
     4801 gactggtgaa agatcccaag ggaaataccc ttcccgcacg cgaattactc tgcgccctcc
     4861 ggcgcgctaa ccacaaggta tagggacgca cagccactcg tctgatggcc tgacgaactg
     4921 gtcacgatta gcttcccatc gggctacgtg cttcgacgcg ggcacagtct gagaaatgac
     4981 atcatgcacg aggtgaagcg atgaaagtcc tcttcataat ttccagttcc gacacagcat
     5041 tctggctatc ggaagttacc catccgtact ggcacctcac cgaacggggc atcgaggtcg
     5101 acttcgccag tccgctgggc ggcaaggtcg tgtatgaccc ttacagcgac ccctattttg
     5161 agcattctac tgaagccgag gacctggtca gcaaaggctt cctgtctgac aagaacctcg
     5221 tcgcaaagct ggagacgacg ttgaagctca aggacgtcga tctggcccgt tacgatgcgg
     5281 ttcacgtggc gggcggacgg ggcgcaacct tcgaccttta tccgaacgag gacgtggcga
     5341 gggtactgga atatttctgg gcgaaggaga aggtggtcgg cgcgatctgt cacggcgcca
     5401 tcgccctcgg caacctcccc gatcgggtcc gcggtcgtcg cacaaccgga tacacgctcg
     5461 agggagacca ggaactccag cgcatgttcg gcagcggctt cgtcattcca cacttccccc
     5521 agacagtcct ggaagaagtg ggctcgattt actcgcgggt cgcgccgaac gatccctatg
     5581 tcataaggga cggcaagctg gtgactggtc agaaccagca atccgcgtcg gagtatgcgc
     5641 tcgttctgct tcacgctatg accggtgaga gccctgtttc ggccagctaa cgggagccgt
     5701 ctgacctaga acactcgctc cgggggtggc cctcgtcgtc acggcaaata tggctactac
     5761 gtcgcaatgg cctcgatgat cgctcgcgga cggccgccaa cgagccgaca ggatcgccct
     5821 ccggaaccgg tcgtttgacc cgatcaacgc ctgatcaagt cgcgagaaga acccatgctg
     5881 tttcatgtcg ccatcaccgt ccggattccc cacgacgtcg acccggaaaa gatcaagcag
     5941 ttgggtgtgc aagagcacga gcgagcagct gagctccagc gtcagggcaa gtggctgcat
     6001 ctctggcgcg ttgtaggaaa attcgccaac gttagtatct tcaaagtgga aagcccagcc
     6061 gaactcaacg agattctgga gtccatgcct ctacatccgt acatggaggt tgaagttacg
     6121 gcactttgcc gacatcccgg gtcactggcc gaggtgaact aaataatcaa tacaataagc
     6181 cgggattact tcgtagaata gacgggtcga tgcgagttct attcatcata acgagctccg
     6241 acaagggtac ttggctttcc gaagtggttc tgttgcagct ctgcaccgcc ggcccggtcg
     6301 ggtagacgcg gtggcatgac aagacgtcga caagcggtac agggacgaca ggatcggccc
     6361 ttcaaagggc ggcagttcag cgccgaggtg atcctgtggg cggtccggtg gtatctgttg
     6421 tttccgatca gctaccgtga tctcgagctc atgctgctgg atcgaggggt tgaggtggac
     6481 cacaccacca tcttccgctg gatccaggcc tatgctgtcg aactggagaa gcgcctccga
     6541 ccacacctgc gcgtgagcaa cggctcctgg cgggtggacg agacatacgt gagggttaag
     6601 ggccgctgga tgtatctgta tcgcgctgtc gacagccgag gccagacgat cgactttctg
     6661 ctttcggcca agcgcgatgc cgaggcagca aaacggcttt tccgcaaggc cttggcgcag
     6721 ccacacacgg tgaacccgcg caccatcaga gaccgtctaa aacctggggg tgtacattcc
     6781 ggctctgtgg cgacgggctg gagtgtggga tgaggtggcg ggttatgttg gagttggtcg
     6841 gagaggatgg gacggtgtcc gttcgggaac tcggtggcgg tgcgaccgtg gcagaatacg
     6901 cccccaggac tattggcctg acgcttgcgg aaggaaaaca gatattggct gagacgcagc
     6961 gctgtctcgt ccaggcccag accgcggacc attgccggcg gcggcgagta tgtcagcggt
     7021 gc
//
LOCUS       DATAVD010000594         9546 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2476507, whole genome shotgun sequence.
ACCESSION   DATAVD010000594 DATAVD010000000
VERSION     DATAVD010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9546
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2476507"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..2814
                     /gene="acnA"
                     /locus_tag="VHX39_11025"
     CDS             121..2814
                     /gene="acnA"
                     /locus_tag="VHX39_11025"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019088614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEX3991691.1"
                     /translation="MTSIGHDTLKTRRTLTVGGKAYDYFSLPEAAKTLGDISRLPVSL
                     KVLLENVLRFEDGRSYTVEDAKSIAGWLANASSTKEVPFKPARILMQDFTGVPAVVDL
                     AAMRDGIIRLGGDPAKVNPLVPVDLVIDHSIQIDVFGTADAPAKNEELEFERNGERYR
                     FLRWGQDAFNNFRVVPPGTGICHQVNLEYLSQVVWTSTNTGTNFAYPDTLYGTDSHTT
                     MVNGLGVLGWGVGGIEAEAAMLGQPIAMLIPDVIGFKLTGRLPEGATATDLVLTVTQM
                     LRRKGVVAKFVEYYGPGLENLALPDRATIGNMAPEYGATCGYFPVDKVALDYMRLTGR
                     DPHRIELVEAYLRAQGMFLEPGGPDPVFTDTLELDLGTVQPSLAGPKRPQDRVLLKEA
                     AASFNADLTKSLGVPANEAGLSVKVEGKDYELTHGDVVIAAITSCTNTSNPSVLVAAG
                     LVARKARAKGLKPKPWVKTSLAPGSQVVTEYLDKAGLTEDLDALGFNLVGYGCTTCIG
                     NSGPLDDAIVDAIEDNKLVGAAVISGNRNFEGRVHANVRANYLASPPLVVSYALLGKV
                     TQDIATEPLGTGNDGKPVYLRDVWPTNKEIADVIASSLSRDQFLKRYGEVNKGPKLWQ
                     QIEVERDSATYRWVDGSTYVKNPPYFEGITMQPPPIADIKGARILAELGDSITTDHIS
                     PAGSIRRTSPAGDYLLERQVLQKDFNSYGARRGNHEIMMRGTFANIRIRNEMLNNVEG
                     GMTKHIPSGEQMSIYDAAMRYKAEGVPLVVFGGKEYGTGSSRDWAAKGTLLLGIKAVI
                     VESFERIHRSNLVGMGVLPLTFKDGMDRKQLNLTGDETIDISGLDKLTPRMDLSLVIH
                     RANGATDSVPVTCRIDTLDEIGYYEHGGILQYVLRQMAKAA"
     gene            2928..4181
                     /locus_tag="VHX39_11030"
     CDS             2928..4181
                     /locus_tag="VHX39_11030"
                     /inference="COORDINATES: protein motif:HMM:NF016830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HEX3991692.1"
                     /translation="MHWLNRVAVLLVLYAVPGACLVQADDPPAFEAPLIKAGVTPSFI
                     YNGVAAADLAGGVKRGGAFENNLHVQLALDGAKLAGLTGVTGWLDALWIFGSQPNLLA
                     GAAQGVSNISAAPALRLYEAWLQYNTPQNRFSILAGRYDLNAEFYNLRSAALFLNSSF
                     GIGADFGVSGIAGPSNFPNTSLAVRFAYKPIPNGVLQFAVLDGAPVNAQLGSSGPFNP
                     HNGLLLVAEADYMTPSSDQFLIGRQPNQPSYDDKVAVGAWYYTASFADLGSISPSGAP
                     VFRQGEAGAYLLLDQLLFKSQSDPNQRVTGFVQLGAADQRVDRFGTYIGAGLTVASPL
                     QSRPDDQLGVAMAMDRNGSHYLEGQQRAGLPVTAAETVIEMSYLAQVASWLSMQPDLQ
                     YMIHPNTDPRLRDALVAQLQIQIKF"
     gene            complement(4212..4736)
                     /locus_tag="VHX39_11035"
     CDS             complement(4212..4736)
                     /locus_tag="VHX39_11035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3991693.1"
                     /translation="MIETARLILRPWRDSDLPWFAEQNADPVVMRYLVGPLTRAQSDA
                     YAAQAVEHLAATGYCKWAVEAPGVAQFIGAVGLSRVKFEASFTPAVEVAWRLHRRYWG
                     RGYATEAARAAIEDGFTRAGLSEIVALTTLGNTASQRVMERLGMTRTIEFDHPLVAEG
                     SPLRRHILYRLARS"
     gene            4859..5770
                     /locus_tag="VHX39_11040"
     CDS             4859..5770
                     /locus_tag="VHX39_11040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3991694.1"
                     /translation="MSDVTILATGLGFPEGPVVCADGSVVLTEIRNNQCSRVTPDGKV
                     SVFSKAGGGPNGLAIGPDGFFYLCNNGGSRYVEGHSMGVGPHPDYKFGSVQRIDPKTG
                     EAKLLYKEVNGHVLSAPNDLVFDTAGGFYFTDLGKRYARHRDHGGLYYALPDGSKIVE
                     LAYPILSPNGCGLSPDGKTIYVADTEGARLWAFDIEAPGVIKAPKPHAAHSGRVIAGL
                     GGAARFDSLAVMASGNICVATLTTGYITEISPQGDIVRTEKMPDTYPTNICFGGPDMR
                     TAYITLSDTGRLGVMQWPEPGLKLNFN"
     gene            5734..6531
                     /locus_tag="VHX39_11045"
     CDS             5734..6531
                     /locus_tag="VHX39_11045"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HEX3991695.1"
                     /translation="MAGTRVEAEFQLSTEILFERRGTVFLLLGMLAWVCIGLVGAFLV
                     AAALGSGALLLHHLPGFGFVPEPNLLTYVLVGSTAFQATLLWGALRQGRQLGHGDRNA
                     GLGIRPIRHPGQVALLGLVMIVCLLSFVLLAARIPALREFAKSVTPDIMARLGEGGPL
                     AVLMKVTLALILAPLSEELFFRGWLWEALRRRNHAVLTTACVTALPWLLLHGLDAPAR
                     IVFLIPAAVVFSLARHRGGGVLASLIVHVTNNTTAVLMQAIAVLVGV"
     gene            complement(6535..7458)
                     /locus_tag="VHX39_11050"
     CDS             complement(6535..7458)
                     /locus_tag="VHX39_11050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional helix-turn-helix transcriptional
                     regulator/GNAT family N-acetyltransferase"
                     /protein_id="HEX3991696.1"
                     /translation="MEQDVLDRRTEAVRAFNRFYTRRIGVVQEGYLQSRFSLTEARVL
                     YELAHADGLTAAQIGSALDLDAGYLSRMLRSFEQDGLLARGPSETDKRQTILALTASG
                     RAAFAPLDQRSRQEIGAMLSRLPDPAQKALVDSMQSITRLLSDAPLPDWTTRHPAPGD
                     IGWVIERHAALYAAEYGFDHRFEALVAQVAGAFLDNHEPARERAWIAERNGVRLGSVF
                     LVRKTHDIGKLRLLLVEPSARGLGVGKRLVEECIGFARQAGYRRVTLWTNDVLLAARN
                     IYRAAGFQLVSSTPHSDFGPPMVGEEWELDL"
     gene            complement(7501..9099)
                     /locus_tag="VHX39_11055"
     CDS             complement(7501..9099)
                     /locus_tag="VHX39_11055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase family protein"
                     /protein_id="HEX3991697.1"
                     /translation="MRDYHFPGRSPVYATHGMAATSMPAATLTALDVLREGGNALDAA
                     IAACAVLCVIEPQSTGIGGDCFCLYAPAGSGKVIGLNGSGRAPAAATIDWYENAGITA
                     LENTSAHSVTVPGAINAWETLLKAHGRKGLDELLQPAIRFAEEGWPVAPKLAWDWKRL
                     EGKLRKNGSFHFLPGGAAPNPGDLFVQPGLAETLRAVSRHGARAFYEGPIAADIVATL
                     RKHGGLHTEEDFAHGLGNADFVEPITIKWNGYDVYQIPPNGQGILVLMILGMLEGLGD
                     APDGPLGTVRAQRHIEAARLAYRDRDAFVADMSQVDVPVAKLLSREYLNACRALIKDD
                     KAMVNLPAAGEALMPPHRDTVYLCVVDKDGNACSFINSLFQGFGSGILSERSGVMLQN
                     RGFGFRVLRGHPNCIAPRKRPMHTIIPGMVGKDGQAVMPYGVMGGHYQPMGHSWFLTN
                     FLQYGLDIQEAIDLPRLLPLGGKLEIERGIPAEVVQRLTAMGHRPEIVERPHGGGQAI
                     WIDRDRGCLVAGSEPRKDGLALGY"
BASE COUNT         1816 a         2903 c         2985 g         1842 t
ORIGIN      
        1 ggcttacctg ccaccaatgg acggcaaaag cccggtgtgg tttaagcccg atgtaagtga
       61 acaggacaat ggcggtcggg gtcctgccca atccgccaga ccacggacgg gatcatcggc
      121 atgacatcca tcgggcacga cactctgaaa acgcgccgca cgctgacggt tggcggcaag
      181 gcgtacgact acttctcgct gcccgaggcg gcaaaaaccc tgggtgacat ctcccgcctg
      241 ccagtcagcc tgaaagtcct gttggagaac gtgctgcgct tcgaggacgg ccgcagctat
      301 accgtcgagg atgccaaatc catcgccggc tggctggcga acgcgagttc gacgaaagaa
      361 gtccccttca agcccgcccg tattctgatg caggacttta ccggtgtgcc ggcggtggtc
      421 gatctcgccg ccatgcgcga cggcatcatc cggttgggcg gcgatccggc aaaggtgaac
      481 ccgctggtgc cggttgacct cgtgatcgac cactcgatcc agatcgacgt gttcggcacc
      541 gccgacgcgc cggcgaaaaa cgaggaactg gaattcgaac gcaacggcga acgctatcgt
      601 ttcctgcgct ggggtcagga tgcgttcaac aatttccgcg tcgtgccgcc cggcaccggc
      661 atctgccatc aggtcaacct ggaatatctc agccaggtgg tgtggaccag caccaacacc
      721 ggcaccaact tcgcttatcc cgacactctg tatggcaccg actcgcacac cacgatggtg
      781 aacggtcttg gcgtgcttgg ctggggcgtc ggcggcatcg aggccgaggc cgccatgctg
      841 ggccagccga tcgccatgct gatccccgac gtcatcggct tcaaactcac cggcaggctg
      901 cctgagggcg cgaccgccac cgatctcgtg ttgaccgtga cacaaatgct tcgtcgcaag
      961 ggcgtggttg ccaagttcgt ggaatattac ggacccggcc tggagaatct cgcgctgccc
     1021 gaccgcgcca cgatcggcaa catggcgcct gagtacggcg cgacctgcgg ctatttcccg
     1081 gtcgataaag tggcactgga ctatatgcgc ctgaccggcc gcgacccgca tcgcatcgaa
     1141 ctggtcgaag cctatttgcg ggcgcagggc atgttcctgg aacccggcgg accggacccg
     1201 gtcttcacgg atacgctcga gttggatctt ggcaccgtgc aaccgtcgct cgccggaccg
     1261 aagcggccgc aggatcgcgt gctcctgaag gaagccgctg cgtcgttcaa tgccgacctc
     1321 accaaaagcc tcggcgtgcc ggcgaacgag gccggattgt cggtcaaggt cgaaggcaag
     1381 gactacgaac tgacccacgg cgatgtggtg attgcggcga ttacctcgtg caccaatact
     1441 tccaacccgt cggtactggt tgcagctggt ctggtggctc gcaaggcgcg cgccaagggc
     1501 ctgaagccga agccgtgggt aaagacgtcg ctggcgcccg gttcgcaggt ggtgaccgaa
     1561 tatctcgaca aagccggtct gaccgaggat ctggatgcgc tcggcttcaa tctcgtgggt
     1621 tacggttgca cgacctgcat cggcaactcc gggccgttgg acgatgcgat cgtcgatgcg
     1681 atcgaggaca acaagctggt aggtgccgcg gtgatctccg gcaaccgcaa tttcgaggga
     1741 cgggtgcatg ccaacgtgcg ggccaactac ctggcctcgc cgccgctggt ggtttcctat
     1801 gcgcttctgg gtaaggtgac ccaggatatc gccaccgagc cgttgggcac cggcaacgat
     1861 ggcaagccag tatatctgcg cgatgtctgg ccgaccaaca aggaaatcgc cgacgtgatc
     1921 gcatccagcc tgtcgcgcga tcagttcctg aaacgttacg gcgaggtcaa caaaggcccg
     1981 aaactgtggc agcagatcga ggtcgagcga gacagcgcca cctaccgttg ggtcgatggt
     2041 tccacctacg tgaaaaaccc gccttatttc gagggcatca cgatgcaacc gccgcccatc
     2101 gccgacatca aaggcgcccg catccttgcc gaactgggcg attcgatcac caccgaccat
     2161 atcagtccgg cgggatcaat tcgcagaacc tcgccggcag gcgattacct gctggaacgc
     2221 caggtgctgc agaaggattt taatagttac ggcgctcgtc gaggcaacca cgagatcatg
     2281 atgcgcggca catttgccaa catccgtatc cgcaacgaga tgctgaacaa tgtcgaaggc
     2341 ggcatgacga agcacatccc gtcaggcgag caaatgtcga tctacgacgc ggccatgcgc
     2401 tacaaggccg agggggtgcc tctggtggtg ttcggcggca aggaatacgg caccggctcg
     2461 tcgcgcgatt gggcggccaa gggcacgttg ctgttgggta tcaaagcggt gatcgtggaa
     2521 agttttgaac gaatccaccg ctccaacctt gttggcatgg gtgtcctgcc gttgaccttt
     2581 aaggacggca tggaccgcaa gcagttgaac ctgaccggag atgaaacgat cgacatctca
     2641 ggcctggata aactgacgcc gcggatggat ttgtcgttgg ttatccatcg ggcgaatggt
     2701 gccacggaca gtgtgccggt gacctgccgg atcgatacgc tggacgagat tggctactac
     2761 gagcacggcg gcattttgca atatgtgctg cggcagatgg cgaaggcagc gtaaccccga
     2821 cgaaaacccg ggacagggta gaaacggagc cggaacctta cggaggcgta tggattgcgc
     2881 ggctatatgg tcgccgcggc ggcacatccg aagcgcgaat cggaaccatg cactggttga
     2941 accgcgtcgc cgtattgctg gtgctgtacg cggtccctgg agcgtgcctg gttcaggccg
     3001 acgacccccc ggcgtttgaa gccccgctga tcaaggccgg cgtcactcca tcttttattt
     3061 ataatggcgt cgctgcggct gatctggccg gaggcgtgaa gcggggtggg gcctttgaaa
     3121 acaacctgca tgtgcaactt gccttggatg gagcaaagct cgccggactg acaggagtga
     3181 cgggttggct ggatgcgcta tggatttttg gcagccagcc aaatttactt gccggtgccg
     3241 cccagggtgt gagcaatata tcggcggcgc cggccttgcg actgtacgag gcatggctgc
     3301 aatacaatac gcctcaaaat cgattttcaa ttcttgccgg ccgttacgac ctgaatgccg
     3361 agttttacaa tctgcgatcg gctgcgcttt ttcttaatag ctcgttcggt attggggccg
     3421 acttcggagt gagcgggatt gccggaccgt caaactttcc caatacctca ctcgccgtcc
     3481 ggttcgctta taagccgatc ccaaacgggg tgctgcagtt tgcggttctt gacggcgccc
     3541 cggtcaacgc acaactcgga tcgagcggtc cttttaatcc ccacaacgga ttgttgctgg
     3601 ttgccgaggc cgattacatg acgccatcgt cagaccagtt tctgatcggc cgtcagccga
     3661 accagccatc ctatgacgat aaggttgccg tgggtgcctg gtattacact gccagttttg
     3721 ccgatctcgg ttcgatcagc ccgtccggtg cgccggtgtt tcgtcagggc gaagccggcg
     3781 cttacctgct gctcgatcaa ttattgttta aatcgcagag cgatccgaac cagcgtgtca
     3841 cggggttcgt tcagctaggc gcagccgatc aacgggtgga ccggttcgga acctatatcg
     3901 gtgccggcct gaccgttgcc agcccgctgc aaagccggcc tgacgaccaa cttggcgtag
     3961 ccatggccat ggatcgcaac ggatcgcatt accttgaggg tcaacagcga gcgggcctgc
     4021 cggtgaccgc agcagagacc gtgatcgaaa tgagttatct cgcgcaggtc gcatcctggt
     4081 tgtctatgca gccggacctt cagtacatga tccaccccaa taccgatccg cgtctgaggg
     4141 acgcattggt tgcacagttg cagattcaaa ttaagttctg accctgtgtt atcgacaacg
     4201 gtcccgtcat gtcacgagcg cgccaggcga tacaggatat gccgccgcaa cggcgagcct
     4261 tccgccacca gaggatgatc aaactcgatc gttctggtca tgcccaaccg ctccatgacg
     4321 cgttgcgacg ccgtattgcc gagtgtcgtc aacgcaacaa tttcgctcag gccggcacgg
     4381 gtgaagccgt cctcgatcgc cgcccgcgct gcctcggtgg catagccgcg accccaataa
     4441 cgccgatgca aacgccaggc gacctcgacc gccggagtga acgaggcctc gaatttcaca
     4501 cgcgacagtc cgacggcacc aatgaactgc gccacgcctg gcgcttcgac tgcccacttg
     4561 cagtaaccgg tcgctgccag atgctcaacc gcctgcgcgg cataggcatc gctctgcgcg
     4621 cgggtcagcg ggccgaccag atatcgcatc acgacagggt cggcgttctg ttctgcaaac
     4681 catggcagat cgctgtcccg ccagggacgc aggatcaaac gagccgtctc aatcatggtc
     4741 gaacgttacc gcgctgcgtt tgcaaaatcc acgtccctgc ccaaaatcac ccggtggttg
     4801 acggggccgc cagagcagtg acactcgcag ccatagccat aaacggagga acgcgcccat
     4861 gagcgatgtg acaattctgg cgaccggcct tgggtttccc gaaggcccgg tcgtgtgcgc
     4921 cgacggttct gtcgtgctga ccgaaatccg caacaatcaa tgctcgcggg tcacgccgga
     4981 tggcaaggtc agcgtgttct ccaaagccgg cggcggcccg aacggcctgg cgatcgggcc
     5041 ggatggcttt ttctatctgt gtaacaatgg cggcagccgt tatgtcgagg gccactcgat
     5101 gggcgtcggc ccgcacccgg actacaagtt cggctcggtc cagcgcatcg atccgaaaac
     5161 cggcgaggcg aagctgcttt acaaagaagt caatggccat gtgttgtcgg cgcccaacga
     5221 tctcgtgttc gatactgccg gcgggtttta tttcaccgac ctcggcaagc gctatgcgcg
     5281 gcatcgcgat cacggcggat tgtattatgc gttgcccgac gggtcgaaga tcgttgaact
     5341 ggcttatccc attctgagcc ccaacggttg cggcctgtcg cccgacggta aaacgattta
     5401 cgtcgccgac accgaaggcg cgcgactctg ggcgttcgat atcgaagcgc caggcgtcat
     5461 caaagcgccg aaaccgcatg ctgcgcacag tgggcgcgtc atcgccggtc tcggtggtgc
     5521 ggcgcggttc gacagcctcg cggttatggc cagcggcaat atctgcgtgg cgacgttgac
     5581 caccggctac atcaccgaaa tttcgccgca aggcgacatc gtccgcaccg agaaaatgcc
     5641 cgacacttat ccgaccaata tctgctttgg cggacctgat atgcgcaccg cttatatcac
     5701 cctgtccgac accggccggc tcggtgtcat gcagtggccg gaacccgggt tgaagctgaa
     5761 tttcaactga gcaccgaaat tttgttcgag cggcgaggta ccgttttcct gctgctcggc
     5821 atgctggcct gggtttgcat cggtctggtc ggcgcgttcc tggtcgcggc ggcgcttggc
     5881 tccggcgcgc tgttgctgca tcacctgccc ggctttggat ttgttccgga gccgaatctc
     5941 ctgacttacg tgctggtcgg atcgactgcg tttcaggcga ctttgctctg gggcgcgcta
     6001 cggcaagggc ggcagctcgg ccatggcgac cggaacgcag gcctcggcat cagaccgatc
     6061 cggcaccctg gccaggtcgc actgctcggc ctggtgatga ttgtttgcct gttgagcttt
     6121 gtactgctgg ccgcgcggat tccggcgctg cgcgaatttg caaaatcggt cacgcccgac
     6181 atcatggcac gcctgggcga aggcggtccg ctggccgtgc tgatgaaggt aactctcgca
     6241 ttgatcctgg cgccgctgtc ggaggagctg ttcttccgtg gctggctgtg ggaggcgtta
     6301 aggcggcgca accacgccgt tctgacgacc gcctgcgtga cggcgctgcc gtggttgttg
     6361 ctgcacggtc tcgatgcgcc cgcccggatc gtgttcctga tccctgccgc ggtggtgttt
     6421 tcgcttgcgc gtcaccgggg cggcggcgtg cttgcttcac tcatcgtaca tgtcacgaac
     6481 aacaccacgg ctgtgttgat gcaggcgatt gcggtgctgg tcggggtgtg atcgctacag
     6541 gtccagttcc cattcctcgc ccaccattgg cgggccgaaa tcgctgtgcg gcgtgctgct
     6601 gaccagttga aatccggccg cacgataaat gttgcgtgct gccaacagaa catcgttggt
     6661 ccacaacgtc acgcgacgat agccggcctg gcgcgcgaac ccgatacact cctcgaccag
     6721 ccgtttgcca acgccaagtc cgcgcgccga cggctcgacc aacagcagcc gcagcttgcc
     6781 gatgtcatgc gttttgcgta ccaggaatac cgagcccagt cgaacgccgt tgcgctcggc
     6841 gatccaggcg cgctcgcgcg caggttcgtg gttatcaaga aatgcgccgg cgacctgtgc
     6901 gaccaacgct tcgaaccggt gatcaaaccc gtattccgcg gcgtagagtg cagcgtggcg
     6961 ctcgatgacc cagccgatgt cgccgggcgc cggatgacgg gtggtccagt ccggcagcgg
     7021 agcgtctgac aacagccggg taatggattg catgctgtcg accaatgctt tctgggctgg
     7081 atccggcaac cgggaaagca tcgcaccgat ctcctgccgc gatcgttggt ccagcggagc
     7141 gaacgccgca cgaccggacg cagtcagcgc cagaatggtc tggcgtttgt cggtctcgga
     7201 cggaccccgg gcaagcagtc cgtcctgctc gaacgaccgt agcatgcggc tgagatagcc
     7261 tgcgtccagg tccagcgccg agccgatctg ggctgcggtg agaccatcgg cgtgcgccag
     7321 ttcatacaac acccgcgcct cggtcaacga gaagcggctc tgcagatagc cctcctgcac
     7381 gacgccgatg cggcgcgtgt aaaagcggtt gaaggcacgg accgcttcgg tgcggcgatc
     7441 gagcacatcc tgttccatcc ggtcaggatg ccccggaaag ttgactcagt caactaacag
     7501 ttagtagccc agtgcgagac cgtccttgcg gggctcggag ccggcgacga ggcagccgcg
     7561 atcgcggtcg atccagatcg cctgcccgcc gccgtgcggc cgctcgacaa tctcgggccg
     7621 gtgtcccatc gccgtcagcc gttgcacgac ttcggccggg atgccgcgct caatctccag
     7681 cttgccgccc aaaggcagca ggcgcggcag gtcgattgct tcctgaatgt cgaggccata
     7741 ttgcaggaaa ttggtcagga accaggagtg ccccatcggc tggtaatgcc cgcccatcac
     7801 gccatagggc atcaccgcct ggccgtcctt gccgaccatc cccggaatga tcgtgtgcat
     7861 cggccgtttg cgtggcgcga tgcaattcgg gtgaccacgc aacacgcgaa agccgaagcc
     7921 gcgattctgc agcatgacgc cggaccgctc agacagaatg ccggacccaa agccctggaa
     7981 cagcgaattg atgaaactgc acgcattgcc gtctttatcg acaacgcaaa gatagacggt
     8041 gtcgcgatgc ggtggcatca gcgcctcacc cgccgcgggc aggttgacca tggccttgtc
     8101 gtctttaatc aaggcgcggc aggcgttcag gtattcgcga cttaacagtt tcgcgaccgg
     8161 cacgtcgacc tgcgacatgt cggcaacgaa ggcatcgcgg tcgcggtagg ccagacgcgc
     8221 agcctcaata tgccgctgcg cgcggacggt gcccaacgga ccgtcgggag catcgccgag
     8281 gccctccagc atgccgagga tcatcagcac caaaatgccc tgaccgttcg gcgggatttg
     8341 gtacacgtcg taaccgttcc atttgatcgt gatcggctcg acgaagtcgg cattgccgag
     8401 gccatgggca aaatcttcct cggtatgcag gccgccatgt ttgcgtaatg tggcaacgat
     8461 gtcggcggcg atcggtcctt catagaaggc gcgtgcgccg tgccgggaga cggcgcgtaa
     8521 tgtttcggca aggcccggct ggacgaagag atcaccgggg ttgggcgcgg cgccgccggg
     8581 caggaagtgg aacgagccgt ttttgcggag tttcccttcc agtcgtttcc agtcccaggc
     8641 cagtttggga gcaaccggcc agccttcctc ggcgaaacgg attgccggct gcaacaattc
     8701 gtcgagacct ttgcggccgt gcgctttcag caacgtctcc caggcgttaa tcgcgcccgg
     8761 cacggtgacg gaatgagcgg aggtgttttc gagcgcggtg atgccggcgt tttcatacca
     8821 gtcgatcgtt gcggcggccg gggcgcggcc ggagccgttc aggccgatca ctttgcctga
     8881 tccggcgggc gcgtagaggc agaaacaatc gccaccgatg ccggtcgact gcggctcgat
     8941 cacgcacaag acggcgcagg cggcgatggc ggcgtcgagc gcattgccac cctcacgcag
     9001 aacgtcgagc gcggtcaggg tcgcggccgg catcgaggtg gcggccatgc catgcgtggc
     9061 atagaccggg ctgcggccgg gaaagtgata atcgcgcatc aacgctcctt tgggttgcga
     9121 cgggccgtgt tgggccggcg gcccgggatg aggcgaagat gaaccgggtt cgccgatcgt
     9181 tcaacggctg ggaaactttc gttcgcttcg cccgtgcgcg ggctgcaggg gcgcgttgtc
     9241 atgagcggtg atcattggcg gcttctggtt tcggagggtt tgcaaaggct gatgtggatt
     9301 ccggcgcgcc tcatgggcgg gcgttgcagc aataaggcaa cgaagcgcgg gcggctcggg
     9361 tcctgatcct tctctgttgc gctgtccctc tcatttagaa tcttgcttcg aacggcacag
     9421 tttctgacgt caggcaatgt gcctcgtcga gcgccgaagg attttatttt ggaggtgcag
     9481 aggtacagaa caccgagaca tcgcgctgaa taaccggtcc gtgccgcacg gttgaccata
     9541 tctcag
//
LOCUS       DATAVD010000595         7207 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1357469, whole genome shotgun sequence.
ACCESSION   DATAVD010000595 DATAVD010000000
VERSION     DATAVD010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7207
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1357469"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..598)
                     /locus_tag="VHX39_11060"
     CDS             complement(<1..598)
                     /locus_tag="VHX39_11060"
                     /inference="COORDINATES: protein motif:HMM:NF015823.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-type transport auxiliary lipoprotein family
                     protein"
                     /protein_id="HEX3991698.1"
                     /translation="MRRFGLACSVLAAQWLVGCSLLLPPKPEPVTAILDKMPGHVPTG
                     VVHPDTLLVRSPETSAAFDTTRMAYSVKAYQLAYFRDNQWAETPAQMIQPLLVRTLQQ
                     TGFFRAILSPPESETPSYSLRTEILELIQDHTTNPPVVRLKLHLQLFQASGWPIASRD
                     IVEQEAMANAVPYAGVVAANDVVAKALRTTAQFVTSVAR"
     gene            complement(595..1551)
                     /locus_tag="VHX39_11065"
     CDS             complement(595..1551)
                     /locus_tag="VHX39_11065"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEX3991699.1"
                     /translation="MSAHLKASLIFVVALCVGGLGAAFWYLWSSGQYTTYRLETHDAV
                     SGLIADSPVELHGVEIGKVTRVGLLDARTVDIQISVAKNAPISKATVATITSRGLAAR
                     GFTGYVYVALENTGADAGPPVIDPGHRYAVIPTAPSLTDTMDTTVADAVQQIRLMTPL
                     IQSMLDKKTVASLKQSLDEFQAIMTTLAAHNERLGSLIVNADHDSRAIGLLLDDKTIA
                     SLQRTAGGLQDVMATLTANGARLRSLLVNAEVDSREIRPLLETSDATLKALKTQVLPH
                     LYQSLGDLDGLTQSLNGIADRITRDPSTVIRGINTPPGPGER"
     gene            complement(1649..2401)
                     /locus_tag="VHX39_11070"
     CDS             complement(1649..2401)
                     /locus_tag="VHX39_11070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX3991700.1"
                     /translation="MTRRSAVDPAEHAPRLEAVRRRLFLQNGLSLGALGLLTGCNLQD
                     GDAVDRVLWTMSRFNDRVQAWMFDPNRLAPTYPASAITKPFPFNAFYAEDSVPDIDGA
                     DWKLEVSGLVQDRTPWTLQRLRGLPQYSQITRHICIEGWSAIGQWSGARLSDFLIRIG
                     ADTRARYVGFKCADRYYGSLDMASALHPQTILAVDYGDKPLPPEYGFPLKVRVPTKLG
                     FKNPKHVAAVFVTNDYPGGYWEDQGYNWFSGS"
     gene            complement(2398..3042)
                     /locus_tag="VHX39_11075"
     CDS             complement(2398..3042)
                     /locus_tag="VHX39_11075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEX3991701.1"
                     /translation="MPYEQRDRARGHRIVIHPMAVRFAHWLNAASIVVMVMSGWGIYN
                     ASPLFAFRFPPWATLGGWLGGAIAWHLAMLWVLVTNATLYVAYALLSGRFVRMLLPLT
                     PRLVWRDLIGALSLRLSHTPGTYNAVQRLAYVGVLMLGALAVLSGLALWKPVQLQTLA
                     SLLGGYEVARRIHFLAMAGIVGFLVLHLTLVALVPRTLLAMLTGRIHAGADVSR"
     gene            complement(3111..3716)
                     /locus_tag="VHX39_11080"
     CDS             complement(3111..3716)
                     /locus_tag="VHX39_11080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991702.1"
                     /translation="MRQTLLASLAVGLAVGAMGTAIAQTPPSRVRATIDSVTQTAITV
                     TPRNGSPTTIALPADVHISGISIAKIDDIKPGSYIGTAAAPQPDGTQKALEVHVFPPS
                     MVGAGEGFRPWDSAPNSTMTNGTVGDLVGSKGRTLTVKYKGGEKTVIVPDDVPIVSIE
                     PGTRDLLKPGAHVIVFAKKGADGSLTAMSVNVGENGLTPPM"
     gene            3899..4408
                     /locus_tag="VHX39_11085"
     CDS             3899..4408
                     /locus_tag="VHX39_11085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX3991703.1"
                     /translation="MTLMGEIEASIPALRRYAWSLLRDTDDADDLVQDCLVRALDRVA
                     ADSAIAAVRPWLFTIMHNLFVSRWRTMRKRRLTMPDDAADNVEVSVGPEQDDALARRD
                     LLVGLDRLTEDQRQVLLLVSVEGLEYREVASILGVPVGTVMSRLSRARDNLHAHMDGT
                     KRPVLRRVK"
     gene            4405..5190
                     /locus_tag="VHX39_11090"
     CDS             4405..5190
                     /locus_tag="VHX39_11090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HEX3991704.1"
                     /translation="MTDPIRPVQEDDLHAYADGRLDPVRRGVVEAHLQANPVLRRRVE
                     GWREQAEALRDALAFKLREPVPSSLHLGHLQEQRAARQRQGLFSSPWRVAAAMVLMLG
                     LGVGTGWIARGSQRMGEVTRLGLEAAVAHSVFAADPTRPVEIGPENRAELVAWIDRKL
                     HRSVNVPDLSAQGYRLIGGRVLSTMIGAAAMLVYDDGQGGRITLFLQPMRSDVAPMQP
                     VSSGAASGYAWIDGHMGYGVISEGDGSIHGLANSLRKAMLPKS"
     gene            complement(5514..6191)
                     /locus_tag="VHX39_11095"
     CDS             complement(5514..6191)
                     /locus_tag="VHX39_11095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991705.1"
                     /translation="MREGATVISARRMLPLGAALMLGACVSGPPPGPTAIVVPGSGKD
                     FAAFQQDDAVCRRGAASNTGYGDLALPHTEVSNAAISGRAREAGAAARAPTGSGTTAA
                     NGPGASTLEPPDETVPNQLGYLQCMAARGDTVRPEPAGYVEAANWNGYPYPYDYWYPY
                     PYGYGYPYGFYGAGFIGVFGGGFHGRDFHRRFFHEGGMHQGFVHGGGLHGGGFHGSGF
                     HGGGGHR"
     gene            6821..>7207
                     /locus_tag="VHX39_11100"
     CDS             6821..>7207
                     /locus_tag="VHX39_11100"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HEX3991706.1"
                     /translation="MRTKMSLLLVVAAGIAAPALAQSPSPQTATNVKQGAYTIEPKHT
                     QVMFGIDHMSFTTYYGRFSDVSGTLMLSPQAPSTSKFEIHVPVSTISTTSKRLNDELR
                     GDQWFDSKKFPEIVFRSIGATVTGQDT"
BASE COUNT         1356 a         2214 c         2272 g         1365 t
ORIGIN      
        1 agcgcgccac gctcgtcacg aattgcgccg tggttcgcag tgccttggcc accacatcgt
       61 tggccgcgac cacgccggca tatgggaccg cattcgccat cgcctcctgc tcgacgatat
      121 cacggctggc gatgggccat cccgatgcct ggaacaattg aagatgcaat ttcaatcgca
      181 ccactggcgg gttggtcgta tggtcctgta tcagctccaa aatctcggtg cgcagggaat
      241 agcttggggt ctcggattcc ggaggactca aaattgctcg aaaaaacccc gtctgttgca
      301 atgtccgcac caacagcggc tggatcatct gggccggcgt ttcagcccat tggttgtccc
      361 tgaaataagc taactggtag gccttcacac tgtaggccat gcgcgtggta tcaaaggccg
      421 cgctggtctc gggcgagcga accagcaacg tgtccggatg gacaaccccg gtggggacat
      481 gacccggcat cttgtcgagg attgccgtga ccggttccgg ttttggcggc aacagcaggg
      541 agcagccaac aagccattga gccgcgagga ccgaacatgc gaggccaaaa cgtctcatcg
      601 ctcccccggc cctggcggcg tatttattcc acggatgacc gtggatgggt ctctcgtgat
      661 tcggtcggcg atcccgttca gcgactgcgt gagaccatca agatcaccga gcgattggta
      721 caggtgcggc agtacttgtg ttttgagtgc tttgagtgtc gcatcgctcg tctccagcaa
      781 cggccggatt tcgcggctgt cgacttcggc gttgacgagg agcgagcgca gccgagcgcc
      841 attcgccgtc aatgtcgcca tgacatcctg cagcccgcct gcggtacgct gcaacgatgc
      901 gatcgtcttg tcatcgagga ggagtccgat cgcacggctg tcatggtcgg cgttgacaat
      961 cagcgaaccc agccgttcgt tgtgcgccgc cagcgtggtc atgatcgctt gaaattcatc
     1021 cagcgattgc ttcagcgacg ccacggtctt tttatccaac atggattgga tcagcggtgt
     1081 catcagccgg atctgttgca cagcgtccgc aacggtcgtg tccatggtat cggtgagtga
     1141 cggcgcggtt ggaatgacgg cgtaccgatg gccgggatcg atgacgggcg gcccggcatc
     1201 agcaccggta ttttccagag cgacgtaaac gtaaccggtg aaaccgcgag ccgccagtcc
     1261 gcgcgacgtg atcgtcgcta ccgtcgcttt tgagatcggc gcatttttgg caacgctgat
     1321 ctggatgtcg actgtacgcg catcaagcag tccgaccctc gtaaccttgc cgatttcgac
     1381 accgtgcagt tcgacgggtg aatcggcgat cagcccggaa accgcgtcat gcgtttcgag
     1441 ccggtacgtg gtgtactgac cggaggacca cagataccaa aacgccgctc caagaccgcc
     1501 gacacacagc gcgacgacga agatcagact cgctttcaag tgtgccgaca tgcagcgacc
     1561 tccaaccggc ttacccgatc cattgcctcc aacctggagt gtcagcttct tgggctgcat
     1621 cggtgggcgg gggatcgtgc cgtaagtgtc atgatccgct gaaccaattg tatccctggt
     1681 cctcccagta gccccccgga tagtcgttgg tcacgaacac agccgcgacg tgcttggggt
     1741 tcttgaaacc aagcttggtg ggaacccgaa ccttgagcgg gaagccatac tcggggggca
     1801 gcggcttatc gccgtagtcg acggccagaa tggtctgcgg atgcagcgcg gaggccatgt
     1861 ccaaactgcc atagtagcga tcggcacatt tgaaaccaac ataccgagcc cgggtatccg
     1921 cgccgattcg aatgaggaag tcgctcaacc gtgcgccgct ccactggccg atcgcgctcc
     1981 atccctcgat gcagatatgg cgggtgatct gcgagtactg cggcaagccg cgcagccgct
     2041 gcaacgtcca cggggtgcga tcctgcacca ggccggagac ttccagtttc cagtcggcac
     2101 cgtcgatgtc gggaacgctg tcctctgcgt agaatgcatt gaacgggaat ggcttggtga
     2161 tggcgctcgc cgggtaggtc ggcgccaggc ggttgggatc gaacatccag gcctgcacgc
     2221 ggtcgttgaa gcgcgacatc gtccacaaca cgcgatcgac cgcgtcgccg tcctgcagat
     2281 tgcagccggt cagcagcccg agcgcaccca gggacagacc gttttgcagg aacaggcggc
     2341 ggcgcaccgc ttccagtcgt ggtgcgtgtt cggcgggatc cacagcggat cggcgggtca
     2401 tcgcgagacg tccgcgccgg cgtggatccg accggtcagc atggccagca gggtgcgcgg
     2461 caccagcgcg accagggtca ggtgcagcac caaaaaaccg acgatcccgg ccatggccag
     2521 gaaatggatc cgccgtgcca cctcatagcc gcccagaagt gatgcaagcg tttgcagttg
     2581 caccggcttc cagagcgcaa ggccggacag cacggccaat gcccccaaca tcagcacacc
     2641 gacataggcg aggcgttgca cggcattata cgtcccgggc gtatgggaca gccgcagcga
     2701 cagggcgccg atcaggtcac gccagaccag tctcggcgtc agtggcagca gcatgcggac
     2761 aaaacgtccc gacagcagcg cataggcaac gtatagcgtt gcgttggtca ccaggaccca
     2821 cagcatcgcc agatgccagg cgatggcgcc gcccagccag ccaccgagcg tcgcccaggg
     2881 cgggaagcga aaggcaaaga gaggggatgc gttgtagatg ccccatccgc tcatcaccat
     2941 gaccacgatg gaagcggcat tcagccaatg ggcaaagcgg accgccatcg gatggatgac
     3001 gatccggtgc ccgcgcgcac ggtcacgctg ctcatacggc attgggtatt cctggatgga
     3061 agggacagaa gcggcagcgt cacccgccgc cgcgacaggg tcgggaaggg tcacatcggc
     3121 ggggtcagtc cattctcccc gacattgacg gacatcgcgg tcagcgaccc gtcggcaccc
     3181 ttctttgcga atacgatcac atgtgcgccc ggcttcagca gatcgcgcgt gccgggctcg
     3241 atgctgacga tcggcacgtc gtctggcacg atcacggttt tctcgccgcc cttgtacttc
     3301 accgtcaggg tgcgcccctt ggacccgacc aggtcaccga cggtgccgtt cgtcatcgtg
     3361 ctgttgggcg cgctgtccca tggccggaaa ccctcgccgg cgccgaccat gctgggtgga
     3421 aagacgtgca cctccagcgc cttctgtgtc ccgtcgggtt gcggcgcggc ggcggtgccg
     3481 atgtaactgc cgggtttgat gtcgtcgatc ttggcgatcg agatgccgga gatatgcaca
     3541 tcagccggca gcgcgatggt ggtggggctg ccgttgcgcg gggtcaccgt gattgccgtt
     3601 tgggtcacgc tgtcgatcgt ggcacgcacc cggcttggtg gcgtttgtgc gatggcggtt
     3661 cccatggcgc cgaccgccag gccgaccgcc aggctggcga ggagagtttg tctcatgatc
     3721 tgatccaccc gttgttgacg caggccgccg cccccgcgct gtcgtcagcc ggcgaacatc
     3781 ggttgccgca atagacgcac cccgttcgcc gctattccca tgcgtggaaa attaatttgc
     3841 ggcggaatag actcggagtt caggcgtcaa ccgcactgac gacgccgcag gagactcgat
     3901 gacgttgatg ggtgagattg aggcctcgat cccggcgttg cgccgttatg cgtggagttt
     3961 gctgcgcgat acggacgatg ccgacgatct ggtgcaggat tgcctggtgc gggcgctcga
     4021 tcgcgtggcg gcggactcgg cgatcgccgc cgtccgtcca tggctgttca cgatcatgca
     4081 caacctgttc gtcagccgct ggcgaacgat gcgcaagcgg cgtctgacga tgccggacga
     4141 tgcggcggat aacgtcgagg tttccgtcgg ccccgaacag gacgatgccc tggcgcggcg
     4201 tgacctgctg gtcggcctgg accggctgac cgaggaccag cgtcaggtgc ttctgctggt
     4261 cagcgtcgag ggcctggaat accgcgaggt cgcgtcgatc ctgggggttc cggttggtac
     4321 ggtgatgtcg cgcctcagcc gggcgcgaga caatctgcac gcacatatgg acggcacgaa
     4381 gcggccggtg ctgagaaggg tgaaatgact gatccgatcc gccccgttca ggaggatgac
     4441 ttgcacgcct atgccgatgg ccggctcgac cctgtgcggc gtggtgtagt ggaagcgcat
     4501 ctgcaggcga acccggtcct gcggcgccgg gtggagggct ggcgtgagca ggccgaggcg
     4561 ctgcgtgacg ccctcgcctt caagttgcgt gagcccgtgc cctcgtcgct tcacctcgga
     4621 catctgcagg agcagcgcgc cgcgcggcaa cgccagggcc tgttcagcag cccctggcgc
     4681 gtcgccgccg ccatggtgtt gatgctgggc ctgggtgtcg gaaccggatg gatcgcgcga
     4741 ggttcgcagc gcatgggcga agtgacgcgg ctgggattgg aagccgcggt ggcgcattcg
     4801 gtcttcgcgg cggatcccac ccgtccggtc gagattggac cggaaaaccg tgcagagctg
     4861 gtggcgtgga tcgatcgtaa actgcatcgc agcgtcaacg tgcccgacct cagcgcgcag
     4921 ggttaccggc tgattggtgg acgggtcctg tccaccatga tcggcgcggc ggcgatgctg
     4981 gtctacgacg atggccaggg cggccgcatc acactgttcc tgcaacccat gcggtccgat
     5041 gtcgcgccga tgcagcctgt cagttcgggg gcagcgagcg ggtacgcttg gatcgacggg
     5101 catatgggct acggcgtcat ctcggaaggt gatgggtcaa tccatggcct agctaacagc
     5161 ctgcggaagg caatgctgcc aaaaagctga tttctgtgag tgacggtgcg atctccgaat
     5221 gggagctgcc tgcgaaactt tcggtttcgt cagcctatcg tggttcgcgg cgtacgcatg
     5281 ctttgtctga tgagaccgtc cagaagctgg ggggtctacc ggccgtcagt gtggacggcc
     5341 ggaccgggtg gagcacaggg aaagcgggat tcagggtcgc tatgactgac cagctttgtt
     5401 ctccgccggg ttctggacgg tctctagaac ccaagtcctc tggcccgtcg taggcatcgg
     5461 cacagccggc cctctgcccg tgataaatcg gtgtgtcgct tacggagcgc gcctcagcgg
     5521 tgtccgccgc cgccgtgaaa gccgcttccg tgaaaacctc cgccgtgcaa gccccctccg
     5581 tgaacgaacc cttgatgcat gcccccctcg tggaaaaacc ttcgatgaaa gtccctgccg
     5641 tgaaagccgc cgccaaatac accaatgaag ccagcaccgt agaagccgta gggatagccg
     5701 taaccgtaag ggtacggata ccaataatca tagggatatg ggtagccgtt ccaattggcc
     5761 gcctcaacat acccggcagg ttccggcctc accgtatcgc cccgcgctgc catacactgc
     5821 aaatatccca attgattggg gacggtctca tcgggcggtt ccagagtgga tgcaccggga
     5881 ccattcgcgg cggtagtacc tgagccggtc ggcgctcgtg ctgccgcgcc cgcttctctc
     5941 gcgcgcccac tgattgcggc gttcgacacc tccgtgtgcg gcagcgcgag atcgccgtaa
     6001 cctgtattcg acgccgcgcc gcgccggcaa acggcatcgt cctgctggaa cgccgcgaaa
     6061 tccttgcctg atccaggcac tacgatggcc gtgggacctg gcggcggccc cgaaacacat
     6121 gcgccgagca tgagcgcagc gccaagtggc agcatccttc gggcggaaat cactgtggct
     6181 ccctctcgca tttcaggtgc actccgcaat ttgacgctct ttcgctccgg ccaaccgtgt
     6241 ccgccttttc cgcaaccagg atgggttacg ccgcactccg tgctcggaag aaaagaccgg
     6301 cacccggcgc accgtgacat ccaaggaccg ttgcgagcgc gctctgcgca cgaacgggcg
     6361 ccgcatcaag ccccatcatg gatattgacg ttgcccgccg ccgattattc cccgcggtta
     6421 accgaggctt gatcacgctc tcgcgagcag cccaccgctc gcggcgcctg ccgcaagtcg
     6481 ccggtcaggt ttcacgaacc cgggagatct gacccaacga attgccccac gaccggtagt
     6541 cgtctcgcga cgttcgaggt gctggccacg gtggagcgcg acggtctaat tcacacgttt
     6601 cagggcgatc ctggctgggc atgccgagat ccgtgccgat ctttgtcgca agatatcgct
     6661 ctcaggcatc gttgccacta cggtgatgcc gagaccgtcg gcgatccagg ttcggccata
     6721 agggttcggc atgagcatga gcaaaactta accggaatat ccagcgcgtt tcagcgtcac
     6781 tcccagtgaa cgaatatcgt gcggaatgga gtgaccgggt atgcgtacta agatgtcttt
     6841 gttgctcgtt gttgctgccg gcatcgccgc gccagctttg gcgcagagtc catctcccca
     6901 aaccgcaaca aatgtgaagc aaggcgctta taccattgag ccgaaacata cccaagtcat
     6961 gttcggcata gatcatatga gtttcacaac gtattacggc cgcttttcgg acgtttcggg
     7021 tacgctgatg ttatcccccc aagccccctc taccagcaaa tttgaaatcc atgttcccgt
     7081 ttcgacgatc tcgacgacca gtaaaaggtt gaatgacgaa ttgcgcggtg atcagtggtt
     7141 cgattccaaa aaattccccg agatcgtgtt cagatcgatc ggcgcaaccg taacggggca
     7201 ggacacc
//
LOCUS       DATAVD010000596         3849 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_242357, whole genome shotgun sequence.
ACCESSION   DATAVD010000596 DATAVD010000000
VERSION     DATAVD010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3849
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242357"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..1297
                     /locus_tag="VHX39_11105"
     CDS             122..1297
                     /locus_tag="VHX39_11105"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3991707.1"
                     /translation="MSWSGQSFGRKRLGLVLGINQTLSWGMTFYLPAVVIVPVAHDLG
                     QSTFALLGAFTMSLLIAGFCAPRVGRWIDRNGGKGCIAVSIVVVAAGQAILAVSPNIA
                     VWYLGWGVLGVGMAMGLYDAAFATIGTLLGREAGPTITGVTLLAGFASTVFWSLGSAI
                     IGFTGWRGLMLVYAGLMLCVNLPMVLALVPRLDQNRKAANEAAGERSPVSRMAIACLA
                     GFFTLRWFITSALAAHILALLHGIGLDAAAAVVVASLIGPGQVAGRVLEWTIGRRFHL
                     LIRARLAALLFPIGAALLPLGGPVAATAFAILYGMSNGIMTINRGTLPLALFGPNGYA
                     TVLGWLAVPVLVAQAVAPTVAAPVVAALPSLWVFLIGGALGLFATLLLLPLRLPRQD"
     gene            complement(1288..2205)
                     /locus_tag="VHX39_11110"
     CDS             complement(1288..2205)
                     /locus_tag="VHX39_11110"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3991708.1"
                     /translation="MIQANETFDGSWPFAPKFCSAAGFNQHYVDEGSGRPVVMLHGQP
                     TWGYIYRRFIPPIATTHRVIVPDHMGFGKSETPADREYTLSTHVTNLSALIESLDLRD
                     ITFVMQDWGGPIGIGYTVRHPERVHSLVLMNTVCGYGVAGRRDLPAPTESSWFRWILE
                     GMETGRTEAVLSHLGSTILSVMQIVGLERLDRVDPTFIRAYASPFATPADCKGAIAFP
                     LDLALGRIRDFVRAGSAGVPALKTKPAILIEGMLDRAILPELALADFRGLWPDRPVIE
                     VPSAGHYIQEDAPEVAIAAIQTFLGTLQS"
     gene            complement(2209..2427)
                     /locus_tag="VHX39_11115"
     CDS             complement(2209..2427)
                     /locus_tag="VHX39_11115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991709.1"
                     /translation="MIWRSTAMIVVAFVAAWMTVEYSPILLDLIGLGEFVFIGQVALP
                     ILVLSVLEIVFRRISGPTGPGFIHHGQV"
     gene            complement(2424..3134)
                     /locus_tag="VHX39_11120"
     CDS             complement(2424..3134)
                     /locus_tag="VHX39_11120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991710.1"
                     /translation="MTPFFVGWSGRSAVPLFGFLALILLTLFAGFGALAFALGVSVDD
                     PGGGNFTGDKAITGVLIADPYPMIVTDTDHHTILLSGGGKHGVQDQARLLDGRHVRAT
                     GAGVKRGDRDLLLVDQLQPAPGDVVPPVRQSLGTWRLTGELCDGKCSLGVMRPGNKAA
                     HKACANVCLIGGVPPVYITTTPVLGTQYLLMGDLQNHALPDALRDYVAITTRMDGTLE
                     RIGDALVFDTDVTKAVVP"
     gene            complement(3131..>3849)
                     /locus_tag="VHX39_11125"
     CDS             complement(3131..>3849)
                     /locus_tag="VHX39_11125"
                     /inference="COORDINATES: protein motif:HMM:NF025178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX3991711.1"
                     /translation="ALDWYFSYGRYDRFEMLLRGNTSFFQVQGFPFELFGIFSLLVLL
                     LLAATSHDFWLRFLTPPIWKALHMALYAAYASVIVHISLGALQAVQNPLLAAVVLLCA
                     MGVAALHVAASRRPLAAALVEGWIYAGAADAIEEDHGIVVTPPDAEPIAVFRHSGKLS
                     AVTNLCAHQNGPLGEGRVVDGCITCPWHGYQYRLEDGQAPPPFTEALATFRLRIVDGH
                     VWIDPEPNLPGTFVAPVAVS"
BASE COUNT          756 a         1189 c         1190 g          714 t
ORIGIN      
        1 cggattcggt cgtgaacgca tatggcatgg atagactccc ttcctaacgc cgctctccgg
       61 cggcacggtc tgcgcgggcg gtccgccctg aaacccagat agctggggaa ctatacgcct
      121 tatgagttgg tccggacaat ccttcggcag aaagcggctt ggcctggtgc ttggcatcaa
      181 ccagacgctg tcctggggca tgacattcta cctgcccgcc gtggtcatcg ttcccgtggc
      241 acacgactta ggccaatcga catttgctct gttgggcgcg ttcaccatgt cgttgctgat
      301 cgcgggattc tgcgccccca gggtcggacg ttggatcgac cggaatggcg gcaagggttg
      361 cattgccgtc agcatcgtgg tcgtggcggc gggccaggcg atcctcgcag tgtctcccaa
      421 catcgcggtc tggtatcttg gctggggcgt tcttggcgtc ggcatggcga tgggactgta
      481 cgatgccgcc ttcgccacca tcggaacgtt actgggacgc gaggccgggc caaccatcac
      541 cggtgtgacc ttgctggccg gctttgcgag cacagtgttc tggtcgctcg gctcggcaat
      601 catcgggttc acgggttggc gtggattgat gctggtctat gccggtctca tgttgtgcgt
      661 gaacctgcct atggttttgg cgttggtgcc gcggctggat cagaatcgca aagcagcaaa
      721 cgaggcggcg ggcgaacgtt cgccggtcag tcgcatggcg atcgcctgcc ttgcgggatt
      781 cttcacgttg cgctggttca ttacgtcagc attggcagcg cacatattgg cattgttgca
      841 cggcatcggg ttggatgcgg cagccgcagt cgtggtcgcg tcgttgattg ggccaggcca
      901 ggtggccgga cgcgtactgg aatggaccat cggccgccgg tttcatttgt tgatccgcgc
      961 ccggctggcg gcactgttgt ttccgatcgg cgccgcgctg ttgccgctcg gcggcccggt
     1021 tgcagccacc gcattcgcga tactgtatgg catgagcaac ggaatcatga cgatcaaccg
     1081 gggcacattg ccgctggcct tgttcggccc aaacggttac gcaaccgtat taggctggtt
     1141 ggcggtgccg gtgctggtgg cccaggcggt ggcgccgaca gtggcggcgc cggtggttgc
     1201 ggcgttgccg tcactgtggg tgtttctgat cggcggcgcg cttggactgt ttgccacgtt
     1261 gttgctgcta ccgttacgat tgccgcgtca ggattgaagc gtccccagga acgtctggat
     1321 cgcggcgatc gcgacctccg gcgcgtcctc ttgaatgtag tgaccggcac tcggaacttc
     1381 gatcaccggc cggtccggcc acaggccgcg aaaatccgcc agagccagtt ccggcaagat
     1441 tgcccggtcc aacatgccct cgatcaggat ggccggtttg gttttcagcg ccggcacgcc
     1501 ggccgaaccg gcgcgcacga aatcgcggat ccggccaagc gccagatcga gcgggaaggc
     1561 aatggcgccc ttgcaatccg ccggtgtggc aaaaggcgag gcataggcac gaatgaaggt
     1621 cggatcgacg cggtccaggc gttccagtcc aacgatctgc attaccgaca ggatggttga
     1681 accaagatga gacaacactg cctcggtccg gccggtctcc atgccctcca atatccaccg
     1741 gaaccacgat gattccgtgg gcgcgggcag atcacggcgg ccggcaacgc catagccgca
     1801 caccgtgttc atcagcacca gactgtgcac tcgctcgggg tgccgcacgg tgtagccgat
     1861 gccgatgggt ccgccccagt cctgcatcac gaatgtgata tcgcggagat caagcgattc
     1921 gatcaaagcg gacagattcg tgacatgcgt agacaaggtg tattcgcggt ccgcaggagt
     1981 ctcgcttttg ccgaaaccca tgtggtccgg aacgatcacc cggtgggttg ttgcgatcgg
     2041 cgggatgaag cggcggtaga tatagcccca ggtgggttgg ccatgcagca tcaccaccgg
     2101 gcggccactg ccctcgtcga catagtgctg gttgaacccg gcagccgagc aaaacttcgg
     2161 cgcgaaaggc cagcttccgt caaacgtctc gttcgcctgt atcatggatc agacctgccc
     2221 gtgatgaatg aacccgggtc ccgttggccc ggagattcgc cggaacacaa tttccagtac
     2281 cgacagcacc aggatcggca aagcgacctg accgataaag acgaactcgc ccagaccaat
     2341 caggtccagc agtattgggc tgtattcgac ggtcatccag gccgcaacga atgccaccac
     2401 gatcatcgcc gtcgagcgcc agatcatggc acgaccgcct tggtcacatc ggtgtcgaag
     2461 accaatgcgt caccgatccg ttccagtgta ccatccatcc tggtcgtgat ggcaacgtaa
     2521 tcgcgcaacg cgtcgggcag cgcatggttc tgcaaatcgc ccatcagcaa atactgtgtg
     2581 cccagcaccg gggtcgttgt gatgtacacc ggcggcacac ctccgatcag acagacattc
     2641 gcacaggctt tgtgcgccgc tttgttccct ggccgcatca cgcccaacga gcacttgcca
     2701 tcgcagagtt cacccgtgag acgccaggtt cccaacgatt gacgaaccgg cggcacaaca
     2761 tctcctggtg ccggctgcaa ctgatcgacc aacagcaggt cacggtcgcc gcgttttacc
     2821 ccggcaccgg tggctcgcac atggcggccg tccaacaagc gagcctggtc ctgcactcca
     2881 tgcttgccgc cgcccgacaa caggatcgta tggtggtcgg tatcggtcac gatcattgga
     2941 tacggatcgg caatcagcac cccggtgatg gctttgtcgc cggtgaaatt gccgccgccg
     3001 ggatcgtcga cactgacgcc cagagcgaac gccagagccc cgaagccggc gaacagcgtc
     3061 agcaagatca gcgccagaaa gccgaacagc gggaccgcgc tgcggcccga ccaaccaacg
     3121 aaaaatggtg tcatgacacc gccacaggtg caacgaaggt gcccggcagg ttcggctcgg
     3181 gatcgatcca tacgtgccca tcgacaatgc gcaggcggaa ggttgccagc gcctcggtga
     3241 agggaggcgg cgcctggcca tcctccaacc gatattggta gccatgccac gggcaggtga
     3301 tgcaaccgtc gaccacccta ccctcaccca gcggcccgtt ctgatgggcg cagagattcg
     3361 ttacggcaga tagttttccg gaatgccgga agacggcgat cggttcggcg tccggcgggg
     3421 tgacgacaat gccgtgatct tcctcgatcg catcggcggc gccggcataa atccaaccct
     3481 cgaccagggc cgccgccagc ggccggcgcg atgcggcaac gtgcagcgcg gcaactccca
     3541 ttgcacagag caaaaccact gctgcgagca aaggattctg cacggcctgc aaggcaccca
     3601 acgaaatatg cacgatcacc gacgcgtacg cggcgtacag cgccatatgc agcgccttcc
     3661 agatcggcgg ggtcaggaac cgcaaccaga aatcgtgact tgtggctgcc agcagcaaca
     3721 gaaccaacaa cgaaaagatg ccaaacagtt cgaacggaaa gccctgcacc tggaagaagc
     3781 tggtattgcc gcgcagcaac atctcgaacc ggtcataccg gccatagctg aaataccagt
     3841 ccagcgcag
//
LOCUS       DATAVD010000597         1992 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_57048, whole genome shotgun sequence.
ACCESSION   DATAVD010000597 DATAVD010000000
VERSION     DATAVD010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1992
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57048"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..844
                     /locus_tag="VHX39_11130"
     CDS             <1..844
                     /locus_tag="VHX39_11130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycine cleavage T C-terminal barrel
                     domain-containing protein"
                     /protein_id="HEX3991712.1"
                     /translation="RQRYTLLTTESGGIIDDLMVANLGPEGFFIVVNASRKAIDFAHI
                     GAVTAVDVLEDRALLALQGPQAATVMERMAPGATALPFMGVARLMVAGVACLVSRSGY
                     TGEDGFELSVAQGMAVTLANRLLEHQEVIPAGLGARDSLRLEAGLCLYGNDIDETTSP
                     VEAGLVWAIGKRRKLAWDFAGGPAIREQLDDGPARRRVGIRPDGRAPAREHTPVLTPD
                     GHTQVGEITSGGFGPTMNGPMAMGYVRRDVAEDGSKLSLMVRGKPLPATVVPLPFVPH
                     RYVR"
     gene            857..1243
                     /gene="gcvH"
                     /locus_tag="VHX39_11135"
     CDS             857..1243
                     /gene="gcvH"
                     /locus_tag="VHX39_11135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEX3991713.1"
                     /translation="MPGKNSDTRYTKDHEWARLDGDIVTIGITDHAQQQLGELVFIEL
                     PELEREVAANEACAVVESVKAASDVYSPLAGRVAEINETIVEDPEIVNSDAEGEGWFF
                     RIEIDDPATFEELMDQDAYDEFVETL"
     gene            1246..>1992
                     /locus_tag="VHX39_11140"
     CDS             1246..>1992
                     /locus_tag="VHX39_11140"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493331.1"
                     /note="acts in conjunction with GvcH to form
                     H-protein-S-aminomethyldihydrolipoyllysine from glycine;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine dehydrogenase
                     (aminomethyl-transferring)"
                     /protein_id="HEX3991714.1"
                     /translation="MDLLAELEAADQFVARHIGPTESDIAEMLLAIGRASLDDAAAAA
                     VPESIRSNQALNLPPAVDEAAVIAELRELASRNVLKKSLIGMGYHGTVTPPVILRNVL
                     ESPGWYTAYTPYQAEIAQGRLEALVNFQTLICELSGMEIANASMLDEATAAAEAMAMA
                     HAISKTKSDIIAVADDVHPQTRAVLTTRAAALGISLGRLGEGTPFAVLLQYPGTTGEV
                     RDLTADIAAARAQGALAIVAADPLAMVALKS"
BASE COUNT          370 a          569 c          667 g          386 t
ORIGIN      
        1 gcggcaacgc tacacgctgc tgaccacaga gtcgggcggc atcattgacg atctcatggt
       61 cgccaatctc ggccccgagg gtttcttcat tgtcgtcaat gccagccgca aagcgatcga
      121 ttttgcccac atcggcgcag tgacagcggt cgacgtgctg gaggaccgcg ccctgctggc
      181 cttacagggg ccgcaggcgg caacggtcat ggagcgcatg gcgccaggtg caactgcgct
      241 gccgttcatg ggcgttgcgc gcctgatggt cgcgggcgtg gcctgcctgg tctcccgctc
      301 gggctatacc ggcgaagacg gatttgaact ttccgtcgcg caaggcatgg cggtgacgct
      361 ggcgaaccga ctgctggagc atcaggaagt catccccgcc ggtctgggcg ctcgtgattc
      421 gttgcggctg gaggcgggac tttgtcttta tggcaacgac atcgacgaga ccacgtcacc
      481 ggtcgaggca ggtctggtct gggccattgg caagcgccgc aagctggcgt gggatttcgc
      541 cggtggtccg gcgattcggg aacaactcga tgatggtccg gcgcggcgcc gggtcgggat
      601 ccggcccgac ggaagggcgc cggcgcgtga gcacactccg gttctgaccc cggacggtca
      661 cacgcaagtt ggggaaatca cctcaggcgg ctttggcccg acgatgaacg gacccatggc
      721 catgggctat gtccggcgcg atgtggccga ggacggctcg aaattgtccc ttatggtgcg
      781 cggcaaacca ttgccggcca cggttgttcc gttgccgttc gtgccacacc gttacgttcg
      841 ttgaaaggag agtccaatgc caggaaagaa ctccgatact cgttacacca aagatcatga
      901 gtgggcgcgg ctggatggcg acatcgtcac catcggcatc accgatcacg cgcaacaaca
      961 gcttggggaa ctggtgttca tcgaattgcc cgaactggag cgcgaagtgg cggccaatga
     1021 ggcctgtgcc gtggtggaaa gcgtcaaggc ggcctccgac gtttactcgc cgctggccgg
     1081 ccgcgtcgcc gagatcaatg aaacgatcgt cgaggaccct gaaatcgtca acagcgacgc
     1141 cgagggcgag ggctggttct tccgtatcga aatcgacgat cccgcgacgt tcgaggaact
     1201 gatggatcag gacgcctacg acgagttcgt ggaaacgttg tgagtatgga tctgctcgcg
     1261 gagctcgagg ccgcggatca gtttgtcgcg cgccatattg gtccgaccga gtccgatatt
     1321 gcggaaatgc tgctggcgat agggcgcgcc agcctggacg atgccgccgc cgctgccgtt
     1381 cctgagtcga tccgttccaa tcaggcattg aacttgccgc ctgcggtgga tgaagcggcg
     1441 gtgattgccg agctgcgcga gcttgcctca cgtaatgtat tgaagaagtc gctgatcggc
     1501 atggggtatc acgggaccgt tacgccgccg gtgatcctgc gcaacgtgct ggaaagtccc
     1561 ggttggtaca cagcttatac gccgtatcag gcggaaatcg cgcagggccg gctggaggct
     1621 ttggtgaatt tccaaacctt gatttgtgaa ctttccggca tggaaatcgc caatgcctcg
     1681 atgttggatg aggcgactgc ggcggccgag gcgatggcga tggctcatgc catcagcaaa
     1741 acgaaatccg atattattgc cgtcgcagac gatgtgcatc cgcagacgag ggcggtcctg
     1801 accacccggg ccgccgcgct cggcatttcg cttggtcgac tgggcgaggg gacgccgttt
     1861 gctgttttgc tgcaatatcc cggaacgacc ggagaggtgc gcgatctgac ggccgacatt
     1921 gctgcggcca gggcacaagg ggcattggca atcgtcgctg ccgatccgct ggccatggtg
     1981 gcgttgaaat cg
//
LOCUS       DATAVD010000598         2562 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_985985, whole genome shotgun sequence.
ACCESSION   DATAVD010000598 DATAVD010000000
VERSION     DATAVD010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2562
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_985985"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..635
                     /locus_tag="VHX39_11145"
     CDS             <1..635
                     /locus_tag="VHX39_11145"
                     /inference="COORDINATES: protein motif:HMM:NF033587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HEX3991715.1"
                     /translation="FRCHTCGKQFNERSAGVLNRTQYPSDVIALVVLWRLRYKLALRD
                     LPEMFLIRGIVFSHEAVRGWETKLTPALAENLRRRRRGKVGRSWYVDETYIKVHGHWR
                     YLYRAIDRSGALVDVMFSEHRDMAAAKAFFESAKMVTGVTPDRVTTDGHDSYPRAIRT
                     VLGTRIIPTARASDSRPIPKSREVRFSDCGVAIRRFGGAHERSREDYPNR"
     gene            601..1218
                     /locus_tag="VHX39_11150"
     CDS             601..1218
                     /locus_tag="VHX39_11150"
                     /inference="COORDINATES: protein motif:HMM:NF024954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX3991716.1"
                     /translation="MSAAVKITQTDETPATLGVLAARSRDTAQSRRLLAIAMVLEGSS
                     RLEAARQTGMDRQTLRDWVRRVNEVGVAGLLSRRPPGPTPKLSEAQMAELRELVVAGP
                     DPQKHQVVRWRCVDLRAEVTRRFAVTVPDRTIGKWLRKLKLTRVQPRPYHPKKDEAAR
                     EDFKKRMARPVCKRFCDASLISLRQRIRCQGITLAKMEIRTFRSS"
     gene            complement(1350..2378)
                     /locus_tag="VHX39_11155"
     CDS             complement(1350..2378)
                     /locus_tag="VHX39_11155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013634994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEX3991717.1"
                     /translation="MQIAVLGIDLGKNSCSVVGLDASGRVILRRRLHRDGVVKLAAGL
                     SSCIMAMEACCGAHHLGRTLRAQGHEIRLMSAEYVRPYVKAQKNDDRDAEAIAEAATR
                     PTMRFVGLKSEEQLDMQSLHRARDRLVGERTALINQLRAFLLERGISVPQGRRKLERH
                     VETLLVAEEVSFSRRTRVLIEDQQAEWRELDRRIVAFDEEFALQARTDETARLLTTIP
                     GIGPLNATALVAAIGSAETFERGRDLAAWLGLLPKQMTTGGKPKLLGINKRGNVYLRK
                     MLIHGARAALPTLSKAETPLGVWLRSLLTRAHMNIVVVALAAKLARIICAVLRSGKKF
                     EMTAATVS"
BASE COUNT          497 a          831 c          742 g          492 t
ORIGIN      
        1 ggttccgctg tcacacctgc ggcaagcaat tcaacgagcg gagcgccggc gttctgaaca
       61 gaacgcaata ccccagcgat gtcatcgccc tcgtggtgct ctggcgcttg cgctacaaac
      121 ttgcactgcg tgacctgccg gagatgttcc tgatccgcgg catcgtcttc agccacgagg
      181 cggttcgcgg ctgggaaacc aagctcacgc cggcgttggc tgaaaatctg cggcgacgcc
      241 gacgcggcaa ggtgggccgg agctggtatg tggacgaaac ctacatcaag gtccacgggc
      301 actggcgtta tctctatcgt gccatcgacc gctccggcgc gctggtggac gtgatgttca
      361 gcgagcatcg cgacatggcc gccgcgaaag ccttcttcga gtcggccaag atggtcaccg
      421 gcgtcacgcc cgatcgggtc accacggacg ggcacgacag ttatccgcgc gcgatccgga
      481 cggtgctggg cacacgtata ataccaaccg cccgggcttc cgactctcgc ccgattccca
      541 agagccgaga agtacgattc tctgattgcg gcgtggcgat tcgccgattc gggggagctc
      601 atgagcgcag ccgtgaagat tacccaaacc gatgagacac cggcgacact tggtgtactt
      661 gcggcgagga gccgggacac ggcgcagagc cgtcgactgc tggcgatcgc catggttctg
      721 gagggctcat cacgccttga ggccgcgcgc caaaccggta tggaccggca gaccctgcgc
      781 gactgggtgc gtcgcgtcaa tgaagtcggc gttgccggcc tgctgtcgcg acgcccccct
      841 ggcccgacac caaagttgag cgaagcgcaa atggctgaat tgcgcgaact ggttgtcgct
      901 ggtcccgatc cccaaaagca ccaggtcgtg cgttggcgct gtgttgacct gcgcgcggag
      961 gttacccggc gtttcgcggt cacggtcccg gaccgcacga tcggcaaatg gctgcgcaag
     1021 ctcaaactga cccgggtgca gccgcgtcca tatcacccca agaaggacga ggcggcacgg
     1081 gaggatttta aaaaacgtat ggcccgccct gtctgcaaac gattttgcga cgctagtctg
     1141 atcagtctac gccaacgtat ccggtgtcag ggcataaccc tggccaagat ggagatccgc
     1201 acgttccggt cctcataaac ttcacggcgt tgagcgccat ttttttaacc aggcttccag
     1261 aacgccaatc aactgtcagg ccatctcgct ttcaccactc gcaggcctcg tcagccgccc
     1321 gcgccagggc aagcagccaa tcttgtgcgt tacgataccg ttgcggcagt catctcgaac
     1381 ttctttccgc tgcgcagcac ggcgcagatg attcgcgcca gcttcgcggc aagcgccacc
     1441 accacaatgt tcatatgcgc ccgtgtgagc aggcttcgca gccatacgcc caaaggcgtc
     1501 tccgctttcg acaacgtcgg cagggccgca cgggcaccgt ggatcagcat cttgcggagg
     1561 taaacgttgc cccgcttgtt gattccaagc agtttgggtt tgccaccggt ggtcatctgc
     1621 ttcggtagca atcccagcca agccgccaga tcccggccac gttcgaatgt ttcggcgctg
     1681 ccgatcgccg caaccagggc cgtcgcgttc agcggcccaa tgccagggat ggtcgtcagc
     1741 aggcgggcgg tctcatcagt gcgagcctga agcgcgaact cttcatcaaa cgccacaata
     1801 cgacgatcca gttcacgcca ttcagcctgc tgatcctcaa ttagcactcg ggttcggcgg
     1861 ctaaatgaga cctcttccgc aaccagcagc gtctcgacgt gccgctccag tttccgtcgc
     1921 ccctgaggca cgctgatgcc gcgctccagt agaaacgcac gcaactggtt gatcaacgcg
     1981 gttcgttcgc ccaccagtcg atcacgcgca cgatgtaagc tttgcatgtc gagctgctct
     2041 tcgcttttca gtccgacgaa ccgcatcgtc ggccgcgttg ccgcctcggc gatggcttca
     2101 gcatcccgat catcgttctt ctgcgccttg acgtagggac gcacatattc agctgacatc
     2161 agtcgaatct cgtggccttg cgcacgtaac gttcgaccaa gatgatgggc tccgcagcac
     2221 gcctccatcg ccattatgca actcgacagc cccgccgcga gtttgacgac cccatcccta
     2281 tgtaggcgtc gccgcaagat cacgcgccca ctggcgtcca gacccacaac actgcagctg
     2341 ttcttaccca ggtcgatccc cagaacggcg atctgcatgc gtgttctcct ttccctccgg
     2401 ttgcccagcc agcttatgct gccagggtag aggggcgggc catcccataa aacttcgcca
     2461 gcctgaaggc agccttaagc gggacaagcg cggccacgcc ggtcgagatc tggtttcagg
     2521 atgaggccag agtgggacag aaagggtcgc tcagctatgt gt
//
LOCUS       DATAVD010000599         4728 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_614582, whole genome shotgun sequence.
ACCESSION   DATAVD010000599 DATAVD010000000
VERSION     DATAVD010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4728
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_614582"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(132..965)
                     /locus_tag="VHX39_11160"
     CDS             complement(132..965)
                     /locus_tag="VHX39_11160"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEX3991718.1"
                     /translation="MADWIETYRGAVPPWQCDVTEHFTVAYYFDRVEEAEANLADALG
                     FGDLSRRGDVPRRITARFARELRAGASFHVESAALAVDDGLRIGHRFVDSTNGEVVTW
                     FDEHWDLPLTEQQRSMVVGRLAAWNGPVEEQRTDPATTDGFIPTARGRVKTADVDSAG
                     HFSLAAIVHRFSNASGQFGAAIGMDSAFMQAQRRGFSTFELILRISGALRLDMPYLVE
                     TGIGHFGGSSLRMIHRMAVPRTGAEVARLGQFGVNLDLDARRPARWPEEIRQRAAALG
                     G"
     gene            complement(965..1933)
                     /locus_tag="VHX39_11165"
     CDS             complement(965..1933)
                     /locus_tag="VHX39_11165"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-alpha-hydroxyglycine alpha-amidating
                     lyase family protein"
                     /protein_id="HEX3991719.1"
                     /translation="MDSSSILGSGDFKYRLVPDWAKLPDGWDFNEVAAVAVDSRDHVY
                     VFSRSAHPVTVFDRDGTFLRSWGEGVFKRAHGLSMAPDDTIFCTDDGDHAVRRCSPEG
                     KILLTLGTPGKPKPYMGGEPFCQCTHTALSPSGDIYVSDGYGNARVHKYSPDGRLIMS
                     WGKSGVGKGEFNLPHNIGCDADGWVYVADRENHRVQIFNGEGKYETEWRDLHRPSGLF
                     VTPGRCPYCYIGECGPTYGFSRNASGLGPRVSVVSKQDGRILARLGDRTPDNFPGPFT
                     SPHGIAADSRGDIYVGEVAKTGWGNLFPSVTPEKPRAVLQKLVKVD"
     gene            2048..3280
                     /locus_tag="VHX39_11170"
     CDS             2048..3280
                     /locus_tag="VHX39_11170"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX3991720.1"
                     /translation="MTEATAPSLPHAEPEAVGMSSTRLARIITVLNKEIETGQLPGAV
                     IAIARRGHLIFHEAVGYLTPDHSTPMPRDALFAIASMTKPITGVSGLMLWEQGRLGLA
                     DPVERFLPQLGNRQVAVLTERVLAGRGPIETVPAERSITIQDLMRHTSGLTYGGRGTT
                     AVHSLYPASSNVAGATLDAAAFLQRLAAAPLLYQPGTVWDYGLSIDVIGLIVEALSGQ
                     TLGTFLEQHLFHPLGMVDTTFQVPPDKVARLARPLPRNPDTGAAQSVPDRAQALLFEC
                     GGGGLASSALDYLHFAQMLLGGGILGDTRILGRKTVEAMRTNRLTPNIENRIAALAPN
                     SEGYGFGLTVAVRETVGTLMGSPGDFYWNGAYGTLWWADPVEDLAVVFMAQVPGEQRR
                     QFRPLINALVYQALVEGS"
     gene            complement(3306..4229)
                     /locus_tag="VHX39_11175"
     CDS             complement(3306..4229)
                     /locus_tag="VHX39_11175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991721.1"
                     /translation="MPQSQGTSFSANPLTIIVRHQLWDANVEDHTDQGVSIDVAADVD
                     GRQTVLLRFNCFDLERSYVYGPENPDLTTPGRVGGGFGVHCRMDPITDGNPIGWTVRM
                     LGQKLPKMLDRAGYKAIAQAADLASVQRILPEVETCARETFVSKRNTVKHNRGTDIFE
                     AGNIRFGLEMRRQRNGDGGLALHVLGDVGGSKGKAYVEETEVLAFDCFWQGAHYHYGP
                     RNKNHRTNWDLTIIDDPLDWTFEQIENRKLGPMIDRAGYPGIAADLDLDKIASVLPAL
                     KKRAYEMYEEGERLTGHKGLPLEFTPNLAAE"
     gene            complement(4345..4420)
                     /locus_tag="VHX39_11180"
     tRNA            complement(4345..4420)
                     /locus_tag="VHX39_11180"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4385..4387),aa:Ala,seq:ggc)
     gene            complement(4508..>4728)
                     /locus_tag="VHX39_11185"
     CDS             complement(4508..>4728)
                     /locus_tag="VHX39_11185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003629723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA (guanine-N7)-methyltransferase"
                     /protein_id="HEX3991722.1"
                     /translation="LLARVLKPNATWRVASDDPTYQVWVRDVMAAQTLFDDAEPVMTR
                     PDGWPPTRYEAKALQAGRQPLYWVFRRR"
BASE COUNT          895 a         1634 c         1371 g          828 t
ORIGIN      
        1 cgaggcgacc gcgatttccc gcgtgaatcg gccgctcgga caaaactgcg acgtattgcg
       61 cttctctgag gcgcgatacg agtggtctga tcccgacaga agcatcccac gcggtcgggt
      121 gaatcggccc actagccgcc caacgccgcc gcccgttgtc ggatttcttc cggccaccgg
      181 gccggccggc gcgcgtcaag gtcaagatta acgccgaatt gaccaagtcg agcgacttcg
      241 gcgcccgtcc gcgggacggc catgcgatgg atcatgcgca gcgaggaccc accgaaatgg
      301 ccgataccgg tctcaaccag gtaaggcatg tccagccgca gcgcgccgga aatccgcaag
      361 atcagctcga aggttgaaaa cccacgccgc tgcgcctgca taaaggcgct gtccataccg
      421 attgcggcac cgaactgacc ggacgcattg gaaaaacgat gcacaatcgc agcaagagaa
      481 aaatgccccg ccgaatcaac atccgcggtc ttgacccgcc cccgagcagt cgggatgaaa
      541 ccatccgtcg tcgccggatc ggttctttgt tcctcaaccg gaccgttcca cgccgccaac
      601 cgtcccacga ccatgcttcg ctgctgttct gtcaacggca gatcccagtg ctcatcgaac
      661 cacgtcacga cctctccgtt cgtcgaatcg acaaaccgat ggccaatgcg cagcccgtca
      721 tcgacagcca acgccgcact ctcgacatgg aaactcgcgc cggcccgcaa ttcgcgtgcg
      781 aaccgggcgg tgatccggcg gggcacatcc ccgcggcgcg acaggtcgcc aaaacccagc
      841 gcgtcggcaa gattggcctc cgcctcctcc acccggtcaa aataatacgc gactgtgaag
      901 tgttcggtga cgtcgcactg ccagggcggc accgcaccgc gataggtctc gatccaatcg
      961 gccatcaatc caccttcaca agtttttgca gcaccgcccg gggcttttcc ggagtcacgc
     1021 tggggaacaa attcccccag ccggtcttcg cgacctcacc cacataaatg tcgccgcgcg
     1081 aatcggcggc gataccatgc ggcgacgtaa acggcccggg gaaattatcc ggcgtccggt
     1141 caccaagcct ggcaagaatc cggccgtcct gcttgctgac caccgaaacc cgaggaccca
     1201 ggccggaggc gttccggctg aacccgtagg tcggcccgca ctccccaata tagcaatacg
     1261 ggcaacggcc cggcgtcacg aacagcccgc tcggccgatg cagatcacgc cactcggttt
     1321 catacttgcc ttcgccgttg aagatctgca cacgatgatt ctcgcggtct gcgacataaa
     1381 cccagccatc cgcatcgcag ccgatattgt gcggcaggtt gaactcgccc ttgcccacgc
     1441 ccgacttgcc ccacgacatg atcaggcggc catcgggcga gtatttatgt acgcgggcgt
     1501 taccataccc gtccgacaca taaatgtccc cgctcggcga cagcgccgtg tgggtacact
     1561 ggcagaacgg ttcgccgccc atatagggtt tcggcttgcc gggcgtcccc aaggtcagca
     1621 aaatcttgcc ttccggtgag cagcggcgca ccgcatggtc gccgtcatcg gtgcagaaga
     1681 tggtgtcgtc gggcgccata ctgagcccat gtgcacgctt gaaaacccct tcaccccagg
     1741 atcgcaggaa cgtgccgtca cgatcgaaca ccgtcaccgg atgcgcgctg cgactgaaca
     1801 cgtagacatg gtctcgggaa tcgacggcaa cggccgcgac ctcgttgaaa tcccagccgt
     1861 ccggcagctt ggcccagtca ggcaccagcc ggtatttgaa atccccactg cccaggatcg
     1921 atgaagagtc catgacgttt cccctatcgt tgcgggtgtc ccatagggct actgcatcgc
     1981 gccgccctcg tccatgcgac gccccccggt tcgtggtaca gtcgcccgcg gaaccggaag
     2041 gaacgacatg accgaagcca ccgcacccag cctgccgcac gccgaacccg aagcggtcgg
     2101 catgtcatcc acgcggctgg ccagaattat tacggtattg aacaaagaaa tcgaaaccgg
     2161 ccaactgccc ggcgcagtga tcgcaatcgc tcggcgaggc catctgatct tccacgaggc
     2221 cgttggttac ctgaccccgg accacagcac gccaatgccc cgcgacgccc tgttcgccat
     2281 cgcatcgatg accaagccga tcaccggcgt ctccggactg atgctgtggg aacaaggccg
     2341 cctggggctg gccgatccgg tcgagcggtt tcttccccaa ctcggcaacc ggcaggtcgc
     2401 ggtgctgacc gaacgcgtcc tcgccggccg cgggccgatc gaaacggtgc ccgccgaacg
     2461 atcgatcacc atccaggacc tgatgcgcca cacctccggg ttgacctacg gcggccgagg
     2521 caccacggcg gttcactcac tctaccccgc gtcgtccaac gtcgccggcg ccaccctgga
     2581 tgccgctgca ttcctgcaac gattggccgc cgccccgctg ctgtatcaac ccggcaccgt
     2641 ctgggattac ggactttcca tcgacgtcat cggcctgatc gtggaggcgc tttccggcca
     2701 gaccctcggc accttcctgg aacagcattt gttccatccg ctcggtatgg tcgacaccac
     2761 tttccaggtg ccgccggaca aggtcgcgcg cctcgcccgt ccgcttcctc gcaaccccga
     2821 taccggggcg gcacagtccg tgccggaccg agcccaggcg ctgctgttcg aatgcggcgg
     2881 cggcggactg gcatcaagcg cgctggatta cctccacttc gcccaaatgc tgctgggcgg
     2941 cggcatcctc ggcgacaccc ggatcctcgg ccgcaaaacc gtcgaggcca tgcgcaccaa
     3001 ccgcctgact ccgaacatcg agaaccggat cgccgcgctc gcccccaatt cggaagggta
     3061 cggcttcggc ctgacggttg ccgtccgcga aacggttggc acactgatgg gcagcccggg
     3121 tgacttctac tggaacggcg cctacggaac actttggtgg gccgaccccg tggaggacct
     3181 ggccgtggtg ttcatggccc aggtgccggg cgagcagcga cggcagttcc ggcccctgat
     3241 caacgcgctg gtttaccagg cgctggtgga gggttcctga cccccctcca ccctgtcgac
     3301 acgacctatt cggcggccag gttcggcgtg aactccagcg gcaggccttt gtggcccgtc
     3361 aggcgctcac cttcctcgta catctcataa gcgcgcttct tcagcgccgg caggacagac
     3421 gcgattttgt ccaggtccag atcagcggcg atccccgggt aaccggcgcg atcgatcatc
     3481 ggcccgagct tacggttttc gatctgctca aaggtccagt cgagcggatc gtcgatgatc
     3541 gtcaagtccc agttggtccg atggttcttg ttgcgcggtc cgtaatgata atgcgcgccc
     3601 tgccagaagc agtcgaacgc cagaacctcg gtttcttcaa cgtaggcctt gccttttgac
     3661 ccgcccacat cgccaagtac gtgaagcgcc agcccaccat cgccattccg ctgccgccgc
     3721 atctccagcc cgaaccggat attgcccgct tcgaagatgt ccgtcccgcg gttgtgcttg
     3781 accgtgttgc gcttgctgac aaacgtctcc ctggcgcaag tctccacctc gggcaggatg
     3841 cgctgcaccg aggcgaggtc ggccgcctgt gcgattgcct tgtatcctgc tcggtccagc
     3901 atcttgggca gcttctggcc cagcatgcgg acggtccagc cgatcggatt gccatcggtg
     3961 atcgggtcca tccggcaatg cacgccgaag ccgccaccaa cccggccggg cgtcgtcaga
     4021 tcgggatttt ccggcccgta gacatagctt ctttcgaggt cgaagcagtt gaagcgcagc
     4081 agcacggtct gcctgccgtc aacgtcggcg gccacgtcga tggatacacc ctggtcggta
     4141 tgatcctcga cattggcatc ccacaactgg tgtcggacga tgatggtcaa cggattggcg
     4201 gaaaagctgg ttccctgtga ttgtggcatg cctgggcgct cctgttggag gggtttgaac
     4261 aaccctacga agcccgcgca tcgactgcaa gagccgccgg ctcgtgcgcc gtgctggagg
     4321 cagccaattt gagtaggaaa ccactggtgg agccgagggg aatcgaaccc ctgacctcct
     4381 gaatgccatt caggcgctct cccaactgag ctacggcccc aaccggtgga ggcagggggt
     4441 atagccacgt cgttgcaccg gatcaagggc aactcgccgg aaaaattcaa agatgtcagg
     4501 gccgggctca gcgccgccgg aacacccagt acagcggctg gcgcccggcc tgaagcgcct
     4561 tggcttcgta tcgcgtcggc ggccagccat ccggccgggt catcaccggc tccgcgtcgt
     4621 cgaacagtgt ttgcgcggcc atcacatcgc gcacccagac ctgataggtg ggatcgtcgc
     4681 tcgccacccg ccaggtcgcg ttcggcttca gcacccgggc cagcaacg
//
LOCUS       DATAVD010000600         3412 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_804646, whole genome shotgun sequence.
ACCESSION   DATAVD010000600 DATAVD010000000
VERSION     DATAVD010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3412
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_804646"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..1490)
                     /locus_tag="VHX39_11190"
     CDS             complement(99..1490)
                     /locus_tag="VHX39_11190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991723.1"
                     /translation="MERQLHRRRYGSVSTDQSGKLVLLRRGRIMSMQRLFNVAAVLYI
                     LIYAGEGVVRYGLYSIGHDDAILLRDLLIIVPLGLLFVAQALRGRVHPAFAVFAAIVA
                     VHGAIAMFNLSTYVPAIYGAKLLINLLFGFLAARELLNPGPRTMTIFALIWLVSITGV
                     VLDKFLYTFPWTGLETHIGGIRVDISRGWDIDDSFDKRVAGFTRSSISAAMLLPILAT
                     IMAPRIRNMILRFLVLTITVGAVFLTTQKGAVIAIAAVTVILCAPRWSWYGLLCFACV
                     MFAVLDVALPVLSAGLLMPQSAGVFSFASFAMRITLTWPEAWQWIANHNVFPFGVGLG
                     GIGGAQRFYAADFFNPSDNLFVYLYANFGVFGLAYLAWVTALGPRLPRIARPEALQAL
                     AVLAFILGYGAALSMLEDQMAALFVAAAAGMLWQLRQEVFVRNWSDSYQGSWLRRARP
                     SMTPGFAPLQVPR"
     gene            1583..1954
                     /locus_tag="VHX39_11195"
     CDS             1583..1954
                     /locus_tag="VHX39_11195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991724.1"
                     /translation="MLAVAAISASRLAIAAPYCVQTEALPPQCLYYDAASCNARAKQM
                     QGYCSVNTAELQIAPGIGHFCLLTSGNVSTCLYPDADSCNAEARRQNGVCVEAPARDE
                     SPAPDPYRHIRPLTVGSGEKN"
     gene            complement(2030..>3412)
                     /locus_tag="VHX39_11200"
     CDS             complement(2030..>3412)
                     /locus_tag="VHX39_11200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991725.1"
                     /translation="AGNPGATGIDYLANNLGAVRDVLVTAPQDSGAIGIAMTRKWPGP
                     ALLQRVTVHGFGTGIAVANTEYGVTLDHVRLEDQRDTGLANDSNSIAAAHLSVETSGT
                     AIANTSPKGLIVLADSGLRRAGGESDPFDNRGVIVAHSLALDGYPPVPNSGDRLSAVL
                     SAGHWKPLPAHTDVALDDAPAPVASPLRDWVNVLHFASPGPQPLDITDALRRAFASNA
                     ATVYLPFGRYTIHAAIDVPPTLRRFVGMNASITVRPEREPDFDRASGMFRITRAGPPL
                     TIERLAFDMTDLGDQLAVEASGARDVVLRDIVTAGTSLLDRQANGGRVFIEDTCCGAL
                     HIAGPQPVIARQLDTEGGDTRIANDGGNLVVLGLKTEGDCTVLDDRNGARATILGGLL
                     YIVGDADPTVPAFRDPSGGLSASFVEESLRPGSHYSIYRQGGGQDVRATEFPPRGDGR
                     IVPWLGSAGN"
BASE COUNT          702 a         1032 c         1103 g          575 t
ORIGIN      
        1 cggccaggcc gtgcccgaca gcagtttggc atggccaagc accaccatca acgccagcat
       61 gacgcgcaaa acagtgaagt tattgtgatc gctttccgtc atctcggcac ctgcaatggc
      121 gcgaagcctg gggtcatcga cggccgtgct cgccgcagcc agctgccttg gtacgaatcg
      181 ctccaatttc gaacgaaaac ttcctgacgc agctgccata acattccggc tgcggcggca
      241 acgaacagtg cggccatctg atcctcgagc atcgaaagtg cggcgccgta gccgaggatg
      301 aaggccagga cggcgagcgc ctgaagcgcc tcgggacggg caatgcgcgg caaacgaggg
      361 ccaagggctg tgacccacgc gagataggcc aacccgaata cgccgaaatt ggcgtagaga
      421 taaacgaaca gattgtctga tgggttgaag aaatcagcag cgtagaaccg ttgcgcgcca
      481 ccgatgccgc ccagaccgac gccgaacgga aacacattgt gattggcgat ccattgccat
      541 gcctcgggcc aggtcagcgt aatgcgcatg gcgaaggagg caaagctgaa cacgccggcg
      601 ctttgtggca tcagcaatcc ggccgacagt accggcaacg caacgtcgag cacggcgaac
      661 atcacgcagg cgaaacacaa cagtccgtac cagctccatc tcggtgcgca caggataacg
      721 gtcaccgcgg cgatcgcgat gaccgcgccc ttttgtgtgg tcaggaacac tgctcctaca
      781 gtgatcgtca gcacgagaaa gcgcaaaatc atattgcgaa tgcgcggtgc catgatggtt
      841 gccaggatcg gcagcagcat ggcggccgag atcgagctgc gggtaaatcc cgcgacacgt
      901 ttgtcgaagc tgtcgtcgat gtcccagcct cgtgagatgt cgacccggat gccgccgata
      961 tgggtctcca gcccggtcca ggggaacgtg taaaggaact tgtcgagcac gactccggtg
     1021 atcgagacca accagatcaa agcgaatatc gtcatcgtgc gcggcccagg attgaggagc
     1081 tcacgggcgg cgaggaagcc gaagaggagg ttgatcagca atttggcgcc gtagatcgcg
     1141 gggacgtaag tgctgaggtt gaacatggcg atggcgccgt gcacggcgac gatggcggcg
     1201 aacacggcga aggcgggatg cacccggcct cgcagcgcct gtgcgacgaa cagcaaaccg
     1261 agtggcacga tgatcaacag atcgcgtagc aggatcgcgt cgtcatggcc gatgctgtac
     1321 aggccgtaac ggaccacgcc ctcgccggcg tagatcagga tgtagagcac cgcggcaaca
     1381 ttgaacaatc gttgcatgct catgatgcgg cctcgccgca acagcacaag cttcccgctt
     1441 tgatcggtag atacgctgcc ataccgccgg cgatgcaatt ggcgttccaa ctgggttccg
     1501 ctgctggcat gcggcttgcg tgctggatcc acacccgcgc cgaggaaaca aacagatgcg
     1561 ccgacgccga tggagacttc agatgctggc tgtggctgca atatctgcca gccggcttgc
     1621 gatcgcagcg ccgtactgcg tgcaaaccga agccctcccg ccgcaatgtc tgtattacga
     1681 cgcggcgtcc tgcaatgcgc gggcgaagca aatgcaaggc tactgctcgg tcaacacggc
     1741 ggagctgcag attgctccgg gtattgggca tttttgcttg ctgacgtcgg gcaatgtgtc
     1801 cacctgcctg tatcccgacg ctgacagctg taacgccgag gcgcgtcgcc agaacggcgt
     1861 gtgtgttgaa gcgccggcgc gcgatgaaag tccggcaccg gatccgtatc ggcatattcg
     1921 cccgctgacg gtgggtagcg gagagaagaa ctgaggccgc tgatgacgat tgagggcatt
     1981 cctgggccac gatcatggac aagtcctgga ccatgacgct gaaaaaactt taatttccgg
     2041 cgctgcctaa ccacggcacg atccggccat cgccgcgcgg gggaaactca gtggctcgga
     2101 cgtcctgtcc gccgccttgc cgatagatac tgtaatggct acccggccgc aacgattcct
     2161 caacgaacga agcgctcagt ccgccgcttg gatcacggaa cgccggcacg gtcggatccg
     2221 cgtcgccgac aatgtaaagc aggccgccga ggatcgtggc ccgcgcgccg ttgcggtcat
     2281 cgagcacggt gcagtcgcct tcggtcttca accccagcac caccaggttg ccgccatcat
     2341 tggcgatccg cgtgtcaccg ccttcggtgt caagctggcg agcgatcacc ggctgcgggc
     2401 cggcgatgtg cagagcgcca cagcaggtgt cctcgatgaa cacgcgtcca ccgtttgcct
     2461 gccgatccag cagtgacgta ccggcggtga caatgtcacg caatacgaca tcgcgtgcgc
     2521 cgctcgcttc cacggccagt tggtcgccga ggtcggtcat gtcgaatgcc aggcgttcga
     2581 tggtcagcgg cggacccgcc cgggtgatgc gaaacatgcc ggaggcacgg tcaaaatccg
     2641 gctcgcgctc cggccgcacg gtgatcgagg cgttcatgcc gacgaaccgc cgcagcgtgg
     2701 ggggtacgtc gatggcggcg tgaatggtgt aacggccgaa cggcagatag accgttgcgg
     2761 cgttgctggc gaaggctcgc cgcagggcat cggtgatgtc caatggctgc gggccgggcg
     2821 aagcaaaatg caggacattg acccaatcac gcagagggga cgcaaccggg gcgggtgcat
     2881 cgtccagcgc gacgtcggtg tgcgccggca acggcttcca atgtccggcg ctgagcactg
     2941 ccgaaagccg gtcgccgctg ttgggaaccg gcggataacc gtcaagtgcc agactgtgcg
     3001 cgacaatcac gccgcggttg tcgaacggat cgctttcccc gccggcccgg cggaggccgg
     3061 aatcagccag gacaatcaat cccttgggag aggtattggc gatggcggtg ccgctggttt
     3121 cgaccgacag atgggcggcg gcgatggaat tactgtcgtt ggcaaggccg gtgtcgcgct
     3181 gatcctcgag ccggacgtga tccagggtca cgccatactc ggtattggcg actgcgatac
     3241 cggtgccgaa gccgtgcacg gtgacgcgtt gcagcagcgc cggtccgggc catttccgcg
     3301 tcattgcgat gccgatcgct ccgctgtcct gtggcgccgt gaccagcacg tcgcgaaccg
     3361 ctccgagatt gttcgccaga tagtcgatgc cggtcgcacc cggattgccg gc
//
LOCUS       DATAVD010000601         3597 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1546195, whole genome shotgun sequence.
ACCESSION   DATAVD010000601 DATAVD010000000
VERSION     DATAVD010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3597
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1546195"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..596)
                     /locus_tag="VHX39_11205"
     CDS             complement(<1..596)
                     /locus_tag="VHX39_11205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator DnaA"
                     /protein_id="HEX3991726.1"
                     /translation="MTFRQLPLPIPARQAFDEASFLAAESNEAARTWLGRTEVWPERR
                     LALWGGEDCGKTHLLRIWADRSAAEAIDGPALSGFPELSSLAGVAVDDADRAEEAALL
                     HLLNTARDLDRPVLLAARLPPARWTIRLRDLASRLRAITTVEVGAPDDDLLRRLLLHW
                     LAERQLVADQTLHDRLLLRLPRSPEVLRAAVARLDVEAL"
     gene            complement(593..1870)
                     /locus_tag="VHX39_11210"
     CDS             complement(593..1870)
                     /locus_tag="VHX39_11210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX3991727.1"
                     /translation="MGDEIGTGQSGPAQSGETQGDANSPWGGEIETHAIGVGEIGIDE
                     VRPLGRSASQATTSATGSLTQATRAQRLALIGGVLVVGWLALELFASVLAPFVAAAVL
                     AYALDPPTTQLTRIGLRRGAAAAVMVLAMVAGVLLFALLLYPLLLLQIKLLATRIPQY
                     AFTLQGWASEQLAHLQDNFGSDVVNDKLRDLVSSQAANLLSVMLSTATGLVTSGFAIF
                     NVLTLAIVTPILAFYFLRDWPKMTAKVGAWMPRRYAAVVAAQVREVDRILSAWVRGQA
                     MCCLILAFFYAAGLTAAGLDLGLIVGLAAGGLSFIPYVGSLTGGVTAIGLALAQFPTW
                     LHVGVVIGVLIVGQILEGYVIYPRFLGDRVELPAVWVIFALFAGGAAFGFVGVMLAVP
                     VAATIGVLVRFWLRRYLVSPLYLDPPAHPPEVM"
     gene            complement(1860..2474)
                     /locus_tag="VHX39_11215"
     CDS             complement(1860..2474)
                     /locus_tag="VHX39_11215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEX3991728.1"
                     /translation="MPRPERAMRGVPPFQPMPDGTQIGRNAAAGLFTAPNLITFGRLC
                     AVPLAFWLVVEHRLALAFYLFVLAGLSDAVDGWLARRYGGNSIGALLDPVADKALLVT
                     MYVTLAVVRELPDWLAILVVFRDLLIVGGVIVLGVTGQAVVIRPLYVSKLNTLLQIVL
                     IAATLFLQGFELTAPLVLTVLVWAVAASTLVSGAAYVWVAAHGR"
     gene            2521..>3597
                     /gene="purM"
                     /locus_tag="VHX39_11220"
     CDS             2521..>3597
                     /gene="purM"
                     /locus_tag="VHX39_11220"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010665842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEX3991729.1"
                     /translation="MASVDRTKSGSSSPPDDVPHAANGSNTRLTYRDAGVDIDAGDAL
                     VEAIKPLARATQRAGVLGSIGGFGAVFDPRAAGFHDPILVSSTDGVGTKLRIAIETGQ
                     HATVGIDLVAMCVNDLIVQGAQPLFFLDYFATGRLDVEQAAAVIGGIAEGCRLAGCAL
                     VGGETAEMPGMYHGSDYDLAGFAVGAAERGTLLPRDVQPGDAILGLASSGVHSNAFSL
                     VRRIVASSGLPWTSPAPFAPELSLGQALMTPTRIYVQPVLELHHAGLLKAAAHITGGG
                     LPGNLPRVLPDGMVATLEPAWPVPPVFRWLARSGGVATEEMLRAFNCGLGMVLVVADA
                     NADAAADLLARNGETAWRVGTIEAG"
BASE COUNT          712 a         1211 c         1116 g          558 t
ORIGIN      
        1 agcgcctcga cgtccagccg cgccaccgcc gcccgcaaca cctccggact ccttggcaac
       61 cgcagcagca accggtcgtg cagtgtttgg tcggccacca gttgccgctc cgctaaccag
      121 tgcaacagca accggcgcag cagatcgtcg tcaggagcac cgacctcaac ggtggtaatt
      181 gcccgcagcc ggctggccag atcccgcaac cgaatggtcc agcgagccgg cggcaggcga
      241 gccgcgagca acaccggacg gtccagatcg cgcgcggtgt tcagcaaatg cagcagggca
      301 gcttcttcgg cccgatcggc gtcatcgacg gccacgccgg ccaacgacga cagctcggga
      361 aatcccgaca acgccggtcc atcgatcgcc tcggccgcgc tgcggtcagc ccagatccgc
      421 aacaggtgag tcttgccgca atcctcaccg ccccaaagtg ccaggcgccg ctcgggccag
      481 acctcggtgc ggccaagcca ggtccgcgcc gcctcattcg actcggcagc gaggaaactg
      541 gcctcgtcga atgcctgtct ggccggaatc ggcaacggca gttggcgaaa tgtcacatga
      601 cctcaggcgg gtgcgccgga gggtcgagat acagcgggct gaccagataa cggcgcaacc
      661 agaagcggac caggaccccg atggtcgccg ccaccggcac ggcgagcatc acgccgacga
      721 aaccgaacgc cgcgccgccg gcgaacaacg caaaaatcac ccaaactgcg gggagttcca
      781 cccgatcgcc aaggaaacgg ggataaatca catacccctc gaggatctgg ccgacgatca
      841 atacaccgat caccacgccg acgtgcagcc aggtcgggaa ctgtgccaat gccaggccga
      901 ttgccgtcac gccgcctgtc aatgagccga cgtagggaat gaaagacagc cccccggcgg
      961 caagtcccac gatcaagccc agatccaggc cagccgcggt cagtcctgca gcataaaaaa
     1021 atgccagaat caggcagcac attgcctgac ctcgcaccca cgcggacaga attcggtcca
     1081 cctcacgcac ctgtgctgcg accacggcgg cataacgccg cggcatccag gctcccactt
     1141 tggcggtcat cttcggccag tcacgcagga agtagaaagc caggatcggc gtgacgatcg
     1201 ccagggtcag cacattgaat atcgcaaacc cgctggtcac caacccagtg gcggtggaca
     1261 acatgacgct caataagttc gccgcctgac tgctgacgag atcgcgcagc ttgtcgttga
     1321 ccacgtcgga gccgaaatta tcctgcagat gggcgagttg ctcgctggcc cagccttgga
     1381 gggtgaaagc gtattggggg atccgggtgg ccagcagttt gatctgcaac agcaacaacg
     1441 gatacagcaa cagggcgaac agcaacactc cggccaccat cgccagaacc atcactgcag
     1501 cggcggcacc tcgccgcaga ccgatccggg tcagctgcgt cgttggagga tccagcgcgt
     1561 aggccagcac cgcggcagcg acaaagggcg ccagcacgga tgcaaacagt tccagtgcca
     1621 gccagccgac caccaggacg ccgccaatca gcgcgagccg ctgggctcgc gtcgcttgcg
     1681 tcaggcttcc ggttgccgac gtcgtggcct gggaagcgga cctgccgagc gggcggactt
     1741 catcgattcc gatttcgcca actccgatcg cgtgggtttc gatctccccg ccccatggcg
     1801 aattggcatc accttgggtc tcaccgcttt gggcagggcc ggattgcccg gtgccgattt
     1861 catcgcccat gtgcggcaac ccagacatag gcggcgcccg acaccagggt cgatgcagcg
     1921 acagcccaga ccaacaccgt cagcaccagt ggcgccgtca attcgaagcc ttgcaggaac
     1981 aacgtcgccg cgatcagcac gatttgcagc aatgtattga gcttcgatac atacaatggg
     2041 cggatgacca ccgcctggcc ggttacaccg agcacaatga cacccccgac aatgagcaga
     2101 tcgcgaaaca cgaccaggat cgccagccag tcgggtaatt cccgcaccac cgccaaggtc
     2161 acatacatgg tgaccaacag cgccttgtca gccaccgggt cgagcagcgc gccaatggaa
     2221 ttgccgccgt agcgccgtgc cagccaacca tcaaccgcat ccgacagccc ggccaggaca
     2281 aagagataga acgccagcgc gaggcgatgc tcgacgacca gccagaacgc gagcggtaca
     2341 gcacaaagcc ggccgaacgt gatcaggttc ggcgcggtga aaagtcccgc cgcggcgttg
     2401 cgtccgattt gcgttccgtc tggcatcggc tgaaaaggcg gcacccccct cattgcccgc
     2461 tccgggcggg gcatgtttgt ttcccgttcc gtctcccggc ttagcgtatg gagggccgtc
     2521 atggccagtg ttgatcggac caagagcggt tcctcgtcgc cgcctgacga tgtaccgcac
     2581 gctgcaaacg gttctaatac gcgcctgacc tatcgcgatg cgggcgttga catcgacgcc
     2641 ggagacgcct tggtcgaagc aatcaaaccg ctcgcccgcg cgacgcaacg ggccggagta
     2701 cttggctcga tcggcgggtt cggcgccgta ttcgacccca gggcggccgg atttcacgat
     2761 ccgatcctgg tttcaagcac ggatggcgtc ggcaccaaat tgcgcatcgc gatcgaaacc
     2821 ggccagcatg ccaccgtggg catcgacctc gttgccatgt gcgtcaacga cctcatcgtc
     2881 cagggtgccc agcccctgtt cttcctggat tatttcgcca ccgggcggct ggacgtggaa
     2941 caggccgccg cggtgatcgg cggcattgcc gagggctgcc gcctcgcggg ctgcgccttg
     3001 gtcggcggcg aaaccgccga gatgccgggc atgtaccatg gcagcgacta cgatctcgcc
     3061 ggcttcgcgg ttggcgccgc cgagcggggt acgctgctgc cgcgcgacgt tcaaccaggg
     3121 gacgccattc tcggcctcgc gagttccgga gtgcattcca acgcgttctc gctggttcgc
     3181 cggatcgtcg cgtcgagtgg cttgccgtgg acctcgccgg ccccgtttgc gccggagctg
     3241 tctttgggcc aggcactgat gacgcccacg cggatttatg tgcagccggt gctggaatta
     3301 catcacgccg gactgttgaa ggcggcggca catatcaccg gcgggggatt gccgggtaat
     3361 ctgccgcggg tgctgccgga cggtatggtc gcgacgctgg aaccggcctg gccggtccct
     3421 ccggtgttcc gctggctcgc gcgcagcggg ggtgtggcga ccgaagaaat gctccgagcc
     3481 ttcaattgcg gtctcggcat ggtgctggtc gtcgccgatg ccaatgccga tgccgccgct
     3541 gacttgctgg cgcggaatgg cgagaccgcc tggcgcgtcg gcacgatcga agcgggc
//
LOCUS       DATAVD010000602         3019 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2662924, whole genome shotgun sequence.
ACCESSION   DATAVD010000602 DATAVD010000000
VERSION     DATAVD010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3019
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2662924"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..310
                     /locus_tag="VHX39_11225"
     CDS             <1..310
                     /locus_tag="VHX39_11225"
                     /inference="COORDINATES: protein motif:HMM:NF025137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4167 domain-containing protein"
                     /protein_id="HEX3991730.1"
                     /translation="PTPLRCCTVIELRPTARTLEMLKMIPQTNTNGRSRPRPNFSRNT
                     QRPPASQHSSSNNRSQWQQKYDHYCNLAQATNGDDAVTREQHWQHAEHFLRMMNGSAT
                     "
     gene            600..803
                     /locus_tag="VHX39_11230"
     CDS             600..803
                     /locus_tag="VHX39_11230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991731.1"
                     /translation="MAKVVKEKRTRRLWTKEDIRELKALARQKVSADRIAKKFKRSVP
                     ALRQKAMNLGISLDSRTARKRKA"
     gene            837..1541
                     /locus_tag="VHX39_11235"
     CDS             837..1541
                     /locus_tag="VHX39_11235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3991732.1"
                     /translation="MANASSTKTALIIGASRGLGYAMAEEYLKRGWHVVGTIRGESRT
                     QLHDLAARSNGQVEIETVDINFPDQVAALRARLAQRSFDLLFVNSGVSNNPDETVAQV
                     STDDFVRVMVTNALSPMRILEALQDLVPPTGTIGVMSSGQGSVANNTNGMREVYRGSK
                     AALNTFMRSFAARHSDDPRAMVLMAPGWVRTDLGGPQGRLSIEESIPNLVNVLMDVQG
                     KAGLQYLDYLGHTVPW"
     gene            complement(1649..1795)
                     /locus_tag="VHX39_11240"
     CDS             complement(1649..1795)
                     /locus_tag="VHX39_11240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991733.1"
                     /translation="MPVTHPEWSADKVRGGEIELRRPWQKIVFMGGLFGAVVLLLISD
                     FFWR"
     gene            2090..2404
                     /locus_tag="VHX39_11245"
     CDS             2090..2404
                     /locus_tag="VHX39_11245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991734.1"
                     /translation="MKRFTKIALGALMLAGAATVAAAPASARVVVGIGAPVAYAPGPV
                     CNPYSPYYNPDYCGYGPAYVGGPVIGFGLGGWGGGFHGGYRGGGFHGGGFHGGGFHGG
                     HR"
     gene            2699..>3019
                     /locus_tag="VHX39_11250"
     CDS             2699..>3019
                     /locus_tag="VHX39_11250"
                     /inference="COORDINATES: protein motif:HMM:NF019370.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GcrA family cell cycle regulator"
                     /protein_id="HEX3991735.1"
                     /translation="MTYWTDDRIESLKSLWQEGLSASQVACALGGVTRNAVIGKVHRL
                     GLAGRDGAPRVSRPRAPAAPRLRAMACQPVVTVIEQDPFRFEDGSLATMRTIDKAMCR
                     WPIGD"
BASE COUNT          635 a          938 c          888 g          558 t
ORIGIN      
        1 gcccacacct ctccgctgct gcaccgtgat cgaacttcga ccgaccgcgc ggactctcga
       61 aatgctcaaa atgatacccc aaacgaatac caacggtcgc agccgcccgc ggcccaattt
      121 ctctcgcaac acgcagcgcc cgccagcaag ccagcacagc tcatccaaca atcggagcca
      181 atggcagcag aaatacgatc attattgcaa tcttgcgcag gccaccaacg gcgatgacgc
      241 cgtgacgcgc gaacagcact ggcagcatgc cgaacatttt ctgcgcatga tgaacggctc
      301 cgccacctaa gggcgccacc gcgccgcggg gacatagcca gcggcgagac tgtttcctcg
      361 gtcaggtccc tgttggccac ctggcaattc aaaacctgac cttggtcagc gtccaatgaa
      421 aattggcgac aagcttgtga cgatgtttcg ctgctgcggc atgtctcatt aagagataca
      481 attatcgcgg ttgcgcgcgg tcacatggaa caaacagcaa cagatacccg cacgacacat
      541 gctataggcc actgccgacc gagatatggg tcgcgcccag aatcacacaa ggagccgcaa
      601 tggcgaaagt tgttaaagag aaacgcaccc gccggttatg gacgaaagaa gatattcgtg
      661 agctgaaagc ccttgcgcgt cagaaggttt ctgccgaccg cattgccaag aaattcaagc
      721 gcagcgttcc agctctccgg cagaaagcga tgaatctcgg aatctcactg gacagtcgca
      781 cggcccgcaa gcggaaggct tgaggctcca gtgcagctac aggagtgaac tctaccatgg
      841 cgaacgcgtc ctcgacaaag accgctctga taattggcgc gtcacgcggc ctgggctacg
      901 ccatggccga ggaatatctc aaacgcggct ggcatgtggt cggaacgatc cgcggcgaaa
      961 gccgcaccca attgcatgac cttgcggcca gatcaaacgg tcaagttgaa atcgagactg
     1021 tcgacatcaa ctttccagat caggttgccg cgctccgtgc ccgcctagcc caaagatcgt
     1081 tcgacctgtt gttcgtgaac tccggcgtca gcaataatcc cgatgaaacg gtcgcccagg
     1141 tatccacgga cgactttgtg cgcgtcatgg tgacgaacgc gctgagcccg atgcgcattc
     1201 tcgaagcgct gcaagatctc gttccgccga cgggtacgat cggcgtgatg tcgtcgggtc
     1261 agggaagtgt ggcgaacaac acgaatggga tgcgggaagt atatcgtggc agcaaagctg
     1321 ccctgaacac ttttatgcgc agcttcgctg cccgtcattc agacgatccg cgtgccatgg
     1381 tgttgatggc gcccggctgg gttcgtacag acctgggcgg gccgcaaggc cgcctgagta
     1441 ttgaagaaag catcccaaac cttgtgaacg tcttgatgga tgttcaagga aaagctgggc
     1501 tgcaatacct tgattacctc gggcacaccg tcccctggta aagggcggcc gcgtgctagc
     1561 tgaccagctg catggctgtc ggcgtgcgag ctaattccgc agaccggctc tttggcgtaa
     1621 tcccgctggg tccgatccga cgtcttgcct accgccagaa aaagtcggag atcaacagca
     1681 agacgaccgc accgaacagg ccacccatga atacgatttt ctgccagggg cggcggagtt
     1741 cgatttcgcc accgcgaact ttgtcggcag accattccgg atgcgttact ggcattgttg
     1801 cctccaaatg agaacgccgg ctcgtcgcct ttacgattgc tgccgttcgc gtgacggttt
     1861 ccttcctttc ggatcacgca tcaccaaata gggaacgatg gaacaaaggt gccgttccat
     1921 cgccgcaatt cggcaggaac ctaacaaaag cggcgtgcaa ggcgccctta ccgacggaat
     1981 cgacaccttt ccgccacgaa gctgaacgga gaagaatccc catcctcaga tcccgttcag
     2041 ccaccaggga ccaatattgc gtcaacggtc aaatgaaagg agacctctca tgaaacgctt
     2101 cacgaaaatt gccttgggtg ccctgatgct ggcgggtgcc gccaccgtcg ccgcggcgcc
     2161 ggcttcggcc cgtgtggtgg ttgggatcgg cgctccggtc gcgtatgccc ccggtccggt
     2221 ctgcaatccc tatagcccct actacaatcc cgattattgc ggctatgggc cggcctatgt
     2281 cggtggcccg gtgatcggct tcggccttgg tggctggggc ggtggcttcc atggcggata
     2341 ccgtggcggc ggcttccacg gtggtggttt tcacggtggc ggattccacg gcggccatcg
     2401 ctaaccgact gcgctcatca aacggaaggc cccggaaaac cccggggcct ttttcatgcc
     2461 cagaccgctg cgatccaatc gccgagaggt atggcgtccc ccgcaagcgg gccgggccgt
     2521 cggctccgcg cgagcccgcg ccgcggtctc gcccctgccg ggcgtccgtc cctgaccgga
     2581 aagggtggac tggtggtggg atggtcggcg caattcccag agcgcgaggg ccccgggagt
     2641 gccgcgacag gttcgagtcg agagaaaggc tttcggcgcc tgtcgtggag accgacccat
     2701 gacctattgg actgacgatc gcatcgaatc cctgaaatcc ctttggcagg aaggcctctc
     2761 cgctagccag gtcgcgtgcg cgttgggcgg cgtcacccgc aacgccgtca tcggcaaggt
     2821 ccatcgtctg ggcctggccg gccgcgatgg cgccccgcgc gtgagccggc cgcgcgctcc
     2881 tgcagcccca cgccttcgcg cgatggcctg ccaaccggtc gtgacggtga tcgaacaaga
     2941 tccattccgg tttgaagacg gaagtctcgc gaccatgcgc acgatcgaca aggcgatgtg
     3001 ccgctggccc atcggcgat
//
LOCUS       DATAVD010000603         3189 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_804958, whole genome shotgun sequence.
ACCESSION   DATAVD010000603 DATAVD010000000
VERSION     DATAVD010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3189
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_804958"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            235..1413
                     /locus_tag="VHX39_11255"
     CDS             235..1413
                     /locus_tag="VHX39_11255"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3991736.1"
                     /translation="MIRASEPDFWRLWCVGLVVFTVRWLETVAVGVVVYQRSGSAFLV
                     AMMTMLRLLPMGLFGVFLGALAERFDRRATLIGVVVLMGATSATLALLAWTGTLQVWH
                     LALASFVNGCGWATDNPVRRVMMGEVVGREHMGTAMSLDVGANNATRMVGPSIGGFLL
                     VGVGIQGAFLLSVVLYLGALAAALTVRSHIQPGPGSGAILARIAEGLAIVRADRRLIG
                     TLIVTVIYNVFAWPFTSMIPVIGRDRLLLGPEGVGILASLDGIGAFFGALLLAVWLTP
                     RWYGRAYVGGVILYMIMLIVFAVVTSPTMAGVALLLTGLGGAGFSTMQATLVYLAAPP
                     EMRSRILGVLSVCIGTGPIGFVWLGWLADAIGAPNATAVTGGAGLLALSLTWRWWREI
                     "
     gene            complement(1420..1839)
                     /gene="atpC"
                     /locus_tag="VHX39_11260"
     CDS             complement(1420..1839)
                     /gene="atpC"
                     /locus_tag="VHX39_11260"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit epsilon"
                     /protein_id="HEX3991737.1"
                     /translation="MPVNLEIVSPEKLLLSRDVDMVVIPAMEGDMGVLEGHAPMMVML
                     RGGIVSLYAGDQVTDSLFVAGGFAEVTPERCTVLAGEAMPVNEIERSEAEKRLRDAEE
                     AMAQVDEHDAVQEELALERVQSARALIEALDGLLSGH"
     gene            complement(1845..>3189)
                     /gene="atpD"
                     /locus_tag="VHX39_11265"
     CDS             complement(1845..>3189)
                     /gene="atpD"
                     /locus_tag="VHX39_11265"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEX3991738.1"
                     /translation="ITCRIDNRTLVLEVAQELGERTVRCIAMDSTDGMVRGQEVVDTG
                     GPISVPVGPGTLGRILNVIGDPIDEKGPVTAIKRMPIHRDAPTFEEQATSAEILVTGI
                     KVVDLLCPYLKGGKVGLFGGAGVGKTVLIQELINNIAKAHGGVSVFAGVGERTREGND
                     LYHEMIDAGVIKVDEHHNVLEGSKVALMYGQMNEPPGARARVGLSGLTLAEYFRDDEG
                     QDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTKKGSITS
                     VQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSTSRSLDPRIVG
                     EEHYLVARETQRILQTYKSLQDIIAILGMDELSEEDKLVVARARKIQRFLSQPFHVAE
                     VFTGFPGKLVPVAETVRSFKAICAGEYDHLPEAAFYMVGTIEEAVAKAETLRTNA"
BASE COUNT          535 a         1018 c          987 g          649 t
ORIGIN      
        1 accgccccag cacactctgg aacctgatca ttcgcacacc ttgcaaggct tctgaccggc
       61 gcatccgaac cctcgaaagg gctcggactt accggacaga tcgtgtgcta cctaaaccgg
      121 acatatcgtg tgctactgac aagccccgat gcttccttgc ccaccgcgcc gtgccgtggt
      181 ccgctacgcc gtgtgagagg aaacgacaag ccgagcgact cgccggtccg gcgcatgatc
      241 cgggcgagcg agccggactt ttggcgcctc tggtgcgttg gccttgtggt gttcaccgtc
      301 cgctggctgg aaaccgtcgc agtcggtgtg gttgtgtacc aacgctccgg gtccgccttc
      361 ctggtcgcga tgatgaccat gctgcggtta ttgccgatgg gcttgttcgg cgtgttcctc
      421 ggtgcgctgg ccgaacgttt cgatcgacgc gcgaccctga tcggcgtggt agtgttgatg
      481 ggtgcgacgt ccgccacttt ggcgttgctc gcctggaccg gaacgttgca ggtgtggcac
      541 ctcgcacttg ccagtttcgt caacggctgt ggttgggcca cagacaaccc ggtccgccgc
      601 gtcatgatgg gcgaggtcgt gggccgcgag cacatgggca ccgcgatgtc gctcgatgtc
      661 ggagccaaca acgcgacccg catggtcgga cccagtattg gcgggtttct gctggtgggc
      721 gtcggcatcc agggcgcgtt tttgttgagt gtggtgctgt atctgggcgc gctcgccgca
      781 gcgctgacgg tgcgatcgca cattcagccc gggccgggat ctggcgccat tctcgcacgc
      841 attgctgagg gcctggcgat cgtgcgagcc gaccggcggc tgatcggcac gctgatcgtt
      901 acggtgatct acaacgtgtt tgcctggcca ttcaccagca tgatcccggt gatcggacgc
      961 gaccggctgc tgctcggccc cgagggcgtt ggtatcctcg caagcctcga cggcatcggt
     1021 gcgttcttcg gcgctttgct tctggcagtg tggctgacac ctcggtggta cggccgggct
     1081 tatgtcggcg gcgtcattct ctacatgatc atgctgattg tgtttgctgt cgttacgtca
     1141 ccaacaatgg caggtgtagc gttgctgctg accggactgg gcggagccgg gttttcaacg
     1201 atgcaggcga cgttggttta cctggctgcg ccgcccgaga tgcgctcgcg cattctgggc
     1261 gtgctgtcgg tttgtattgg aaccggaccg atcgggtttg tctggcttgg ctggctggcg
     1321 gatgcgatcg gcgcacctaa tgcgacggcg gtgacgggcg gtgctggact gctggcattg
     1381 tcgctgacgt ggcggtggtg gcgggagatt tgaagaacgt cagtgcccgg acagcaaccc
     1441 gtccaacgcc tcaatcaacg ctcgagcaga ctgcacccgc tcgagcgcca gttcctcctg
     1501 gaccgcatcg tgctcatcca cctgcgccat cgcctcttcc gcgtcgcgca gtcgcttctc
     1561 ggcttccgag cgttcgattt cgttcaccgg catcgcctcg cccgccagca ccgtgcaacg
     1621 ttccggggtc acctcggcaa agccgccggc gacgaacaag ctgtcggtca cctgatcgcc
     1681 cgcgtaaagc gaaacgatac cgccgcgcag catgaccatc atcggcgcgt gaccctccag
     1741 cacgcccatg tcgccttcca tggccgggat caccaccatg tcgacatcac gcgacaacag
     1801 aagcttctcc ggactgacga tttccaggtt gacgggcatg acggttacgc gttcgtcctg
     1861 agagtttccg ccttggcaac cgcctcttcg atagtgccga ccatatagaa cgcggcctcc
     1921 ggcaaatggt cgtattcgcc ggcgcagatc gccttgaagc tgcgcacggt ttcggcaacc
     1981 ggcacgagtt tgccgggaaa cccggtgaac acctcggcga cgtggaacgg ttgcgacagg
     2041 aagcgctgga tcttgcgcgc acgggccacg accagtttgt cctcttccga caactcgtcc
     2101 atgcccagaa tggcgatgat gtcctgcaac gatttgtagg tctgcaggat gcgctgcgtt
     2161 tcgcgcgcca ccagataatg ctcttcgcca acgatccgcg gatccagcga acgtgaggtc
     2221 gagtcgagcg gatcgaccgc cggataaatc cccagttccg caatctgcct cgacagcacc
     2281 gtcgtcgcgt caaggtgagc gaacgacgtc gccggcgcgg gatcggtcaa atcgtcggcc
     2341 ggcacataaa tcgcctgcac cgaggtgatc gatccctttt tggtcgaggt aatgcgctcc
     2401 tgcaacgcgc ccatgtcggt ggccagcgtc ggctgatagc ccaccgccga ggggatacgg
     2461 cccaatagcg cggacacttc agcgccggcc tgggtgaaac ggaaaatgtt gtcgacgaag
     2521 aacaacacat cctggccttc gtcatcccga aaatactcgg ccaatgtcag acccgacaga
     2581 cccacgcgcg cgcgggcacc cggcggctcg ttcatttggc catacatcag ggcgaccttg
     2641 gagccctcga ggacgttgtg atgctcgtcc accttgatga cgccggcgtc gatcatttcg
     2701 tgatagagat cattgccttc gcgcgtgcgc tcacccacac cggcgaacac cgacacgccg
     2761 ccatgcgcct tggcgatgtt gttgatcagt tcctgaatga gcaccgtctt gcccaccccg
     2821 gcgccgccga acagtccgac cttgccgccc ttcagatagg ggcacagcag gtcgacgacc
     2881 ttgatgccgg tgaccagaat ttccgcggag gtcgcctgct cctcaaacgt cggcgcatcg
     2941 cgatggatcg gcatgcgctt gatagcggta accgggccct tctcatcgat cggatcgccg
     3001 atgacattga ggatgcggcc gagcgtgcct ggcccaacgg ggacgcttat cggcccgccg
     3061 gtgtcgacca cttcctggcc gcgcaccatg ccatccgtgc tatccattgc gatgcaccga
     3121 accgtgcgct cccccagttc ctgggcgacc tcgagcacga gcgtgcggtt gtcgatcctg
     3181 caggtgatc
//
LOCUS       DATAVD010000604         5413 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_805098, whole genome shotgun sequence.
ACCESSION   DATAVD010000604 DATAVD010000000
VERSION     DATAVD010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5413
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_805098"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..608
                     /locus_tag="VHX39_11270"
     CDS             <1..608
                     /locus_tag="VHX39_11270"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEX3991739.1"
                     /translation="FVGAVSSGSCAAPELWLSRPGKAPVRFTFAERPRHDAAETIARL
                     RAMGLRIRLLSGDHSASVARIAATVGIDDWQAECSPTGKVALLHRMGGRVLMVGDGLN
                     DGPCLAEAHVSVSPATAADISQTLADAVFQGTGLAAVAELVVTARRARGLMRSNIAMS
                     LVYNVLMVPLAVAGLVSPWLAAAAMSSSSLLVIGNSFRVRA"
     gene            605..757
                     /gene="ccoS"
                     /locus_tag="VHX39_11275"
     CDS             605..757
                     /gene="ccoS"
                     /locus_tag="VHX39_11275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HEX3991740.1"
                     /translation="MNVILLLIVASLVLGGCGLAVFLWSLRDGQYEDLDGAANRVLFD
                     RDHPKR"
     gene            884..2026
                     /locus_tag="VHX39_11280"
     CDS             884..2026
                     /locus_tag="VHX39_11280"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3991741.1"
                     /translation="MSLALSGVRVLELARYQAGPRGGMILSDLGAEVIKIERLGGEET
                     RKNPPVVRGQSIYFTVYNRGKKSLCLDMRTSEGKQIFSDLVKKSDIVLENFRPGTMAA
                     MGFSYPQLKAINEKIILISVSGFGQFGPYTDRPAFDPLGQAMSGLMSLTGKPVGQPLG
                     VASSVVDRYTALHATIGALAALRHRERTGEGQMVDVCLLDSALTMVEIPAAYYLQTGE
                     EGGEGGRPPYPTKDGHVVISATSRDMATRLMTLVSGAAADTSPINSSTADDRRLAIER
                     WCATRPNDEIVAALLELGIPVAPVKTIPQVVKDPHMWEREMMVKMADPVAGEIYAPGV
                     TIKMSATPGRVGPVPTPGEHTDELLGEILNFDAAKLAALRQSRVIA"
     gene            complement(2125..3912)
                     /locus_tag="VHX39_11285"
     CDS             complement(2125..3912)
                     /locus_tag="VHX39_11285"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3991742.1"
                     /translation="MIRSSVRSAGLALLLTMNGCGALMSSSTGAKAPGLNVAEAALDG
                     GAGQIALQVSDGVLRDSPNNIRALEIKGDALTLLGDYDQAGQIFQALLAKDPNSARAG
                     IGLGRVKLAKDPAAAEQLFQRVLQRDPKNITALNNLGIARDLQGRHAQAQPAYREALA
                     VNPDLESAQVNLALSMAMSGQGPAAIKLLQAKATQPGAPSKVKHDYAVVLAMAGDRGR
                     AERVLSDDMPPDQAHQLLDSATGTHTKVNAGNNAFASAQRDDEVLPDVVQVPEVTSAP
                     MVAGKTPRAMAAALAAPPPMIVRPRADAQPDSDTPTMQPVNPVAAAVTNQQPLALPIR
                     ATPANPAPVTRVAATVSDAAAVTPEVVAMPRSRPAPTNAPRGDAIADGGLVALPEAAP
                     PPPTPLPPAHHPLNVSGTEPPVLPASTAGRGRSENASVSIARSDSAQPEVAKVAARSP
                     MVQGDRNSAQAAPTALASPPTVLASAAIAPVHAAPRPQATVVPHAASARSGDVATETG
                     PARSDETATMVQFAAAPSMEAAHSYWQSLVHRFPDDLGHREPVVIRFEHDGAVFWRLR
                     AEGFTSLSDAQTLCARMRAGGQACFVPRS"
     gene            complement(4055..5002)
                     /locus_tag="VHX39_11290"
     CDS             complement(4055..5002)
                     /locus_tag="VHX39_11290"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX3991743.1"
                     /translation="MDSSTRLALLAGAAMFLAMMASAAYMLLRDMRGQERYGSRIRQI
                     HGEERVNKLNAERPALRDTLSGLVSRMGQAILSGGLVPAATRGQLETMLRGAGVRGEN
                     AVGVFFGAKMALLVILPVVAWLSVRGSNWSTMVIMFVPFATGVFGLVLPDMIVKQMRK
                     RFMARLEKGLPDALDMMVICAQAGLGMGPAIIRVADELKISYRDLAIEFSLTANELQI
                     MSDTRIALHNLGQRTGLEAFRRLAMTLIQTIQYGTPLTDALRTLSAEMRQEALTAFEE
                     SAARLPTMLTLPMILFILPCVFLIAGGPAIIQVMRAMSN"
     gene            complement(5043..>5413)
                     /locus_tag="VHX39_11295"
     CDS             complement(5043..>5413)
                     /locus_tag="VHX39_11295"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX3991744.1"
                     /translation="EAVTELAGRTGLAEYRFFATALSLQTQTGGTLSETLENLADVIR
                     KRAALKARGHAMTAEARTSSGILALLPIVTGVMLYFLNPSYIMMLFTDATGKEFFSAA
                     VISLILGMLMIRAIIKSVLP"
BASE COUNT         1013 a         1716 c         1688 g          996 t
ORIGIN      
        1 catttgttgg ggcggtgtca tcaggatcgt gtgccgcccc tgaactgtgg ttgagccgac
       61 cgggcaaggc gccggttcgt ttcaccttcg ctgaacggcc acggcacgac gctgctgaaa
      121 caattgcacg tctgcgggca atgggactgc ggatccggtt gctctccgga gaccattccg
      181 cttcagtcgc ccggatcgct gcgacggtag gcatcgatga ttggcaggcg gaatgttccc
      241 cgaccggcaa ggtcgcgttg ctgcatcgga tgggaggtcg cgtgctgatg gtgggagatg
      301 ggctgaacga tgggccgtgc ctcgccgagg cgcatgtttc ggtgtctccc gccaccgcag
      361 ccgatatcag tcaaacgctc gctgacgcgg tgttccaggg gacggggttg gcagcggtcg
      421 ccgaactggt cgtgacggcg cggcgggcga ggggcctgat gcgcagtaat attgcgatgt
      481 cgctggttta taacgtgctg atggtgccgt tggcggtggc agggctggtg tcgccctggc
      541 tggcggcagc agcaatgtcg tcgtcatcgc tgttggtcat cggcaatagt ttccgggtcc
      601 gggcatgaac gtcattctgc tgctgatcgt ggcgtctttg gtgcttggcg ggtgcgggct
      661 tgcggtgttc ctgtggtcgt tgcgggacgg ccagtatgag gacctggacg gtgccgccaa
      721 ccgggtgctg ttcgaccgcg atcatccgaa acgttgagcg ggctgagctt ctcggccagg
      781 cctcgtgtga ggatgaagcc gcgacacagc tcaacaatgc gaggaccttg cctccctccg
      841 cctctgggcc cttaatcctc ccaattaacc aagggagccc ccaatgtccc tcgccctttc
      901 cggcgttcgc gtcctcgaac tcgcccgtta tcaggccggc ccgcgcggtg gcatgatcct
      961 gtccgacctc ggtgcggaag tgatcaaaat cgagcgcctc ggtggcgagg agacccgaaa
     1021 gaaccctccc gtcgtgcgcg gccagagcat ctacttcacg gtctacaatc gcggcaagaa
     1081 aagcctatgc ctcgacatgc gcacctcgga gggaaaacag atcttctccg acctcgtcaa
     1141 aaagtccgac attgtgctgg agaattttcg ccccggcact atggccgcca tgggcttctc
     1201 gtacccgcaa ctcaaagcca tcaacgaaaa aatcatcctg atctccgtct ccggcttcgg
     1261 ccaattcggt ccgtacacag atcgacccgc cttcgatccg ctcggccagg ctatgagcgg
     1321 tcttatgtcc ctcaccggca agcccgtcgg tcagccactg ggcgtggcgt catccgttgt
     1381 ggaccggtat accgcgctgc acgccacgat cggcgccctt gcggcactcc gccaccgcga
     1441 acgcaccgga gagggccaga tggtcgacgt ctgcctcctc gactccgccc tgaccatggt
     1501 cgaaatcccc gccgcctact acctgcaaac cggcgaggaa ggcggtgaag gcggccgccc
     1561 tccctatcca accaaagacg gccacgtcgt catctctgcc accagccgag acatggccac
     1621 ccgcctgatg accctcgtca gcggcgcagc agcagacaca agcccgatca actcctcaac
     1681 cgccgacgat cgccgtctcg cgatcgagcg ttggtgcgct acgcgcccaa acgacgagat
     1741 cgtcgctgcc cttctggaac tcgggatacc tgtcgccccg gtgaaaacca ttcctcaggt
     1801 cgtcaaagat cctcacatgt gggaacggga gatgatggtc aaaatggccg acccggtggc
     1861 cggcgaaatc tacgcacccg gcgtgacaat aaaaatgtcc gccacgcccg gccgtgtcgg
     1921 cccggtaccg accccgggcg aacatactga cgaactgctt ggcgaaatcc tcaacttcga
     1981 cgcagccaaa ctggcagcac tgcgtcagtc aagggtcatc gcctgacgca gccgcgtttc
     2041 agtgcggcag atcggcttcg tgcgcgccag acgccaaatt gtcgcgccga caccaaccgc
     2101 caaaaccaaa ttcggaagct accgttagga ccgcggcacg aagcaggcct gacctccggc
     2161 gcgcatccgt gcgcacagcg tctgagcgtc agacaacgaa gtaaatcctt cggcacgcag
     2221 gcgccagaat accgcgccat cgtgttcgaa cctgatcacg acgggctctc ggtgcccgag
     2281 gtcatcgggg aaacggtgca cgagggactg ccagtatgaa tgggcagcct ccatggacgg
     2341 tgctgcggca aattgaacca tcgtggcggt ttcatcgctg cgggctggcc ctgtttcggt
     2401 cgcgacgtcg ccacttctgg ccgacgcggc gtgtggcaca accgtcgctt gcggccgggg
     2461 cgcagcatgc accggagcaa tcgctgccga ggccaggaca gtcggcgggg aagccagagc
     2521 agtaggagcc gcctgggcgg aatttctgtc tccctggacc attggagacc gggcggcgac
     2581 cttggcaacc tctggctgtg cggaatccga ccgcgcgata ctcaccgacg cgttctctga
     2641 tcttccgcgc cccgcggtcg aagccggcaa gaccggcggt tcagtgccgg aaacgttcag
     2701 gggatggtga gcgggcggga gtggcgtcgg cggaggcggc gcagcctcgg gcaacgcaac
     2761 caggccgcca tcggcaatcg cgtcgccgcg tggtgcgttc gttggggcag gacgcgagcg
     2821 cggcatcgcg accacttccg gtgtcaccgc cgctgcatcg gagacggtag cagccacccg
     2881 cgtaaccggg gctgggttgg cgggggtcgc gcggataggc aacgccagag gctgctggtt
     2941 ggtgaccgcg gcggcgaccg ggttgaccgg ttgcatcgtt ggcgtatcgg agtccggctg
     3001 ggcatccgcc cgtggccgca cgatcatcgg tggtggagcg gccaacgcgg cagccatggc
     3061 tcgcggtgtc ttgcctgcaa ccatcggggc cgaagtgact tcgggaacct ggacgacatc
     3121 tggcagcacc tcgtcatccc gctgtgcgga cgcgaaagca ttgttgccgg cattaacctt
     3181 ggtatgcgtg ccggtggcac tgtccagcaa ctgatgggcc tggtcaggcg gcatatcgtc
     3241 gctcaggacg cgctcggccc gtcctcggtc gcccgccatc gccaggacga ccgcgtagtc
     3301 gtgtttgacc ttggatggtg ctccaggttg ggtggccttg gcttgcagca gcttgatcgc
     3361 cgccgggccc tgaccgctca tcgccatcga cagtgccaga ttgacctgcg ccgactcgag
     3421 atccggattg accgccagcg cctcgcgata agcaggctgt gcctgggcgt ggcggccctg
     3481 cagatcgcgt gcgatcccga gattattcag cgcggttatg ttctttggat cacgttgcag
     3541 gaccctctga aacaattgct ccgccgcagc cggatctttc gccagcttca cccgaccaag
     3601 accgataccg gcacgagcgg aattcgggtc cttcgccagt agtgcctgaa agatttggcc
     3661 agcctgatcg taatcgccga gaagcgtgag cgcgtcgccc tttatctcca gcgcgcggat
     3721 gttgttgggc gaatcacgaa gcacgccatc actgacctgg agtgcgatct gacccgcgcc
     3781 gccgtccaag gctgcttccg caacattgag cccaggcgcc ttggcgccgg tactagacga
     3841 catcaaggcc ccgcagccat tcatggtcag gagaagggcg aggccggcag aacgaacgga
     3901 tgatcggatc atgagggttc aagctccatc gtgcgcctcg gcaacctcgg tatcgcgcaa
     3961 acgtggcgcg gcggcggccc gaagtcgagg cccaatgaaa ccacgagtac tccgagtcat
     4021 cctacccatg agttacagaa ctggaagtcg cccctcagtt cgacatcgcg cgcatcacct
     4081 gaatgatcgc cggtccgccc gcgatcagga atacgcaggg cagaatgaaa aggatcattg
     4141 gcagcgtcag catggtcggc agccgcgccg ccgactcttc aaacgcggtc agcgcttcct
     4201 gccgcatttc ggccgatagc gtgcgcaaag cgtcggtcag gggagttccg tactggatcg
     4261 tttgaatcaa tgtcatcgcc aggcgacgga acgcctccag tccggtgcgt tggccaaggt
     4321 tgtgcagggc aatgcgcgta tcggacatga tctgcaactc gttcgcggtc agcgagaatt
     4381 cgattgccag gtcgcgatac gaaatcttca gctcgtctgc tacccgaatg atcgcagggc
     4441 ccataccaag ccccgcctgg gcgcagatca ccatcatgtc gagtgcatcc ggcaggcctt
     4501 tttcaagtct tgccatgaac cgcttgcgca tctgtttgac gatcatgtcc ggcagtacca
     4561 ggccgaacac gccggtcgcg aagggcacga acataataac catggtggac cagttgctgc
     4621 cgcggaccga caaccatgca accactggca gaatgaccag caatgccatc ttggcgccga
     4681 aaaatacgcc aaccgcgttc tcgccgcgga cgccggcgcc acgtagcatc gtttcaagct
     4741 gtccccgagt cgcggccggc acgaggccgc cgctgaggat cgcctggccc atgcgggaga
     4801 ccaggccgga cagcgtatca cgcagtgccg gccgttccgc attcagcttg ttgacccgct
     4861 cctcgccgtg gatttgacgg attcgcgagc catagcgctc ctgaccgcgc atatcgcgca
     4921 gcagcatgta agctgcagac gccatcatcg ccaggaacat tgcggcgccg gcaagcagcg
     4981 ccaatcgtgt gctgctgtcc attacttctg ccccatcagc gtagctttgg aaggtaaatc
     5041 gatcatggca gcaccgattt gataatggcg cggatcatga gcatgcccag aatcaacgag
     5101 atgactgccg cgctgaagaa ctccttcccg gtggcatcag tgaacaacat catgatgtaa
     5161 ctcgggttga ggaagtacag catcacgcca gtcacgatcg gcagaagcgc caggatcccg
     5221 gaactggtgc gtgcctctgc cgtcatggcg tgaccgcggg ccttcagtgc cgcccgcttg
     5281 cgaatgacgt ccgccagatt ttccagcgtt tcgctcaagg ttccgccggt ctgggtttgc
     5341 agggacagcg cggttgcgaa aaagcggtat tccgcaagac cggttcgtcc ggcgagttcg
     5401 gtcaccgcct cgt
//
LOCUS       DATAVD010000605         2929 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_58042, whole genome shotgun sequence.
ACCESSION   DATAVD010000605 DATAVD010000000
VERSION     DATAVD010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2929
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58042"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..347)
                     /gene="infC"
                     /locus_tag="VHX39_11300"
     CDS             complement(<1..347)
                     /gene="infC"
                     /locus_tag="VHX39_11300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014105241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEX3991745.1"
                     /translation="MQAPPTRDGPRVNEEIRVPQVRLIDQDGEMMGVMGARDAMLRAY
                     AVGLDLVEISPNADPPVCKILDYGKFKYEQQKKRNEAKKKQKVIEIKEIKVRPNIDEN
                     DYQVKMRAMKSFI"
     gene            complement(458..2407)
                     /gene="thrS"
                     /locus_tag="VHX39_11305"
     CDS             complement(458..2407)
                     /gene="thrS"
                     /locus_tag="VHX39_11305"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019090883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEX3991746.1"
                     /translation="MLAITLPDGSVRQFDAPVTGTTVAEAIGPGLARAALAMKVDGRT
                     VDISTPIKHDAAVRFITRRDEEALELIRHDAAHVLAEAVQELFPGTQVTIGPAIENGF
                     YYDFSRNDPFTPEDFSAIEAKMREIVGRGEPFVRQVMDRDEAIRFFTDKGEKYKAQLI
                     QDLPTTEEISLYRQGDWVDLCRGPHLRSTADVGTAFKLTKVAGAYWRGDHRNAMLSRI
                     YGTAWRDQKELDAYLHQLEEAERRDHRRIAKEMDLFHLQEEAAGSVFWHPKGWKLYRR
                     SEDYMRRRLDASGYQEVKTPQLVDRVLWERSGHWDKFREHMFIAQVEDENKTLAVKPM
                     NCPCHILIFQQGMRSYRELPLRLAEFGSCHRYEPSGALHGIMRVRAFTQDDAHIFCTE
                     AQIAAETVRFVDLLSSIYRDFGFESFRVKLADRPANRVGSDAVWDHAESALQEACVTA
                     GVEYTLNPGEGAFYGPKLEFVLRDAIGRDWQCGTLQVDFNTPGRLGAEYVGEDGARHV
                     PVMLHRAIMGSFERFLGIVIEHYAGRFPLWLAPVQVVVATIVSDADDYARDVVDALTK
                     AGLTAQGDLTNQKINAKVRDHSLAHVPVLAVVGRKEAENRTVALRRLGSPAQEVVPLA
                     EAVERLAREATPPDLRNSGGASMIA"
     gene            complement(2584..>2929)
                     /locus_tag="VHX39_11310"
     CDS             complement(2584..>2929)
                     /locus_tag="VHX39_11310"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3991747.1"
                     /translation="HASTEAEAFGRVVIEAQAMGRPVIATNLGGPSETVEDGVTGWLT
                     RPGDVSDLAWALVKALSMDAEARAALGARARASVLQDYTLRAMRDATLQVYDAVLGGE
                     AAETAPVAVAGA"
BASE COUNT          518 a          992 c          864 g          555 t
ORIGIN      
        1 tcgatgaacg acttcatggc gcgcatcttc acctgatagt cgttctcatc gatattcggc
       61 cggaccttga tctccttgat ctcgatgacc ttttgtttct tcttggcctc gttccgcttc
      121 ttctgttgtt cgtatttgaa cttgccatag tcgaggatct tgcacaccgg cggatcggcg
      181 ttcggactga tctccaccag gtccagccca actgcgtagg ctcggagcat ggcgtcccgg
      241 gcgcccatga cgcccatcat ctcaccgtcc tggtcgatca gccgcacctg gggcacgcgg
      301 atctcttcgt tcactcgtgg cccgtcgcgg gtcggcggcg cctgcattgg tcctctggct
      361 atgggtagct cctgtcatcg ttgcaaaaac acgccccggg accctccaga aggaagatcc
      421 cggatcgaag cgtattttgc cctaatttac caaaaattca agcgatcata gaggcgccgc
      481 cggaatttcg taaatcaggc ggcgtcgcct cccgcgcgag gcgttccacc gcctcggcca
      541 gtggcacaac ctcctgcgcc ggagagccca gtcggcgcaa tgcgaccgtc cggttctccg
      601 cctccttgcg gccgaccacc gccagcaccg ggacgtgcgc caggctgtga tcgcgcactt
      661 tggcgttgat tttctggttc gtcaggtcgc cctgcgcggt caggccggcc ttggtcagag
      721 cgtccaccac gtcgcgggca tagtcgtcgg cgtcggaaac gatcgtcgca accacaacct
      781 gcaccggtgc cagccacagc ggaaaccgcc cggcgtagtg ctcgatcaca atgccgagga
      841 accgttcgaa cgagcccatg atggcgcggt gcagcatgac cggaacgtgg cgggcgccgt
      901 cctcacccac atattcggcg cccaaacggc cgggcgtatt gaagtcgacc tgcaaggtgc
      961 cgcactgcca gtcgcggccg atggcatcac gcaagacgaa ttccagcttc gggccataga
     1021 acgcgccctc ccccgggttc agcgtatatt cgacgccggc cgtgacgcag gcttcctgca
     1081 aggcgctttc ggcgtggtcc cagactgcgt cggagccgac acgattggcc ggccggtcag
     1141 ccagcttgac ccgaaacgat tcgaagccga aatctcgata gatcgaactc agcaaatcca
     1201 cgaagcgcac cgtctcggcc gcgatctgcg cttccgtgca gaagatatgc gcgtcgtcct
     1261 gggtgaacgc ccgaacccgc atgatgccat gcagcgcgcc cgagggttcg tagcggtgac
     1321 acgatccaaa ctccgccagc cgcagcggca attcgcgata tgaccgcatg ccctgttgga
     1381 aaatcaggat atgacacggg caattcatcg gtttcaccgc cagcgtctta ttctcatcct
     1441 ccacctgggc gatgaacatg tgctcgcgga atttgtccca gtggccggac cgttcccaca
     1501 acacgcggtc gaccaattgc ggggtcttca cctcctgata gccgctggcg tcgagccgcc
     1561 gccgcatata atcctcggac cggcgataca gtttccagcc cttcgggtgc cagaacaccg
     1621 agcctgcggc ttcctcctgc aggtggaaca aatccatttc cttggcgatc cgtcgatggt
     1681 cgcggcgttc ggcctcctcg agctggtgca gatacgcatc gagctctttt tggtcgcgcc
     1741 acgccgtgcc gtaaatccgg ctgagcatcg cgttgcggtg gtcgccgcgc caataggcgc
     1801 cggcaacctt cgtcagtttg aacgccgtgc cgacatccgc agtagaacgc aggtgcggac
     1861 cgcggcacag atcgacccaa tcgccctggc gatacagcga gatttcctcg gtggtcggca
     1921 aatcctggat caactgggct ttatatttct cacccttgtc cgtgaagaat cggattgcct
     1981 cgtcgcggtc catcacctga cgcacgaacg gttcgccacg gccgacgatt tcgcgcatct
     2041 tcgcctcaat tgcggaaaaa tcctccggtg tgaacgggtc gttgcgggaa aagtcgtaat
     2101 agaagccgtt ctcgatcgcc gggccaatcg tcacctgggt gccgggaaac aactcctgca
     2161 cagcctcggc cagcacatgg gcggcgtcgt gccggatcag ttccagcgct tcctcgtcgc
     2221 ggcgagtgat gaagcggact gctgcgtcgt gcttgatcgg ggtcgagatg tcgactgtcc
     2281 tgccgtccac cttcatcgcc agggcggcgc gggcgaggcc gggaccgatt gcctcggcca
     2341 ccgtcgtgcc cgtcaccggc gcatcgaact ggcgcacgga accgtcgggc agagtgatgg
     2401 cgagcatggg tactgatcct ccgtttcagg gccaccacag aaaatgtggc gcggtgggac
     2461 atggcaccgg ggacgccgca cggcaagcct ttcgtgccag tggcagtcgg cggaacgcgg
     2521 acgcaccgtg gtccggcccg tccatagtgg catcagagtt gcgccagatc gccccggcga
     2581 aactcacgcg ccggcgacgg cgaccggcgc cgtttcggcc gcctcgccac ccaatacggc
     2641 gtcgtacacc tgcaacgtcg cgtcgcgcat cgcacgcaac gtgtagtcct gcagcaccga
     2701 ggcgcgcgcg cgagcaccaa gtgccgcacg cgcttctgcg tccatcgaca gcgccttcac
     2761 caacgcccat gccagatcgc tcacatcgcc cggcctggtc agccacccgg tgaccccgtc
     2821 ctccaccgtc tcactgggcc cgccgagatt ggtggcgatc accggccgcc ccatggcctg
     2881 cgcctcgatc accacgcggc cgaatgcctc ggcctcggtc gaggcgtgg
//
LOCUS       DATAVD010000606         2179 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2848725, whole genome shotgun sequence.
ACCESSION   DATAVD010000606 DATAVD010000000
VERSION     DATAVD010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2848725"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1275
                     /locus_tag="VHX39_11315"
     CDS             <1..1275
                     /locus_tag="VHX39_11315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015823824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015103 - inorganic anion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEX3991748.1"
                     /translation="DGSSTAHLYRPKFVTVLVEGYGPAAFRRDATAALTVAVVALPLS
                     MAIAVASGVGPERGLYTSIIGGFLVSALGGSRFQIGGPAGAFIVLVSATVARFGIEGL
                     LLTVLVSGLMLTVIGALRVGALIRYIPHAVTVGFTCGIAVTILASQLRDLSGLTLAGA
                     EPGPLLAKLAALFSAISTLNPAALAVGVGSAVLIFLLRWWRPSWPGMLTAVVLASVIV
                     WAVGLPVETVGSHFGGIPHGLPVPHLPPLAMDQILAILPTALSFTLLGGVESLLSAKV
                     ADGMTARKHRYHMELVAQGIANIASALFGGISVTGTIARTATNIRAGAKSPMSGIMHS
                     LFLLVFMLVGASLASFVPLCALAGVLVVVCWNMAEKKEFASLLRDWRTASVLLATFGL
                     TLAEDLTTGIITGCVVAGIIAVFNRAIPAEDM"
     gene            complement(1453..>2179)
                     /locus_tag="VHX39_11320"
     CDS             complement(1453..>2179)
                     /locus_tag="VHX39_11320"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEX3991749.1"
                     /translation="RQGERVLFRLLNASPTQNITVALAGHRLNVVALDGNPVPTPRSI
                     DALFLAPAERADVIVEMNHRGVWILGSVREDDRKIGLGVVIEYANEHGEPQWQDPPNT
                     PWDYTVFGTDRAPPEPDHRLELLFEKVPGGRGGYNRWTLNGNSWPSTRQLLTTEVGKR
                     YRLVMTNKSGDNHPIHLHRHTFELTKIGDKKTSGVMKDTVNMTRFSSVEVDFVADDPG
                     PSLLHCHHQDHQDEGFMGLVTYI"
BASE COUNT          352 a          676 c          650 g          501 t
ORIGIN      
        1 gacggctctt ccaccgcgca tctctatcgt ccaaagtttg ttaccgttct ggtcgaaggc
       61 tatggccccg ctgctttccg ccgggacgcg acagccgcat tgacggtcgc agtcgtcgca
      121 ctcccgctct cgatggccat cgcggttgcc tcgggcgtgg gcccggagcg cggtctgtac
      181 acctctatca tcggcggatt tctagtttcg gcgctgggcg gcagccggtt tcagatcggt
      241 ggccccgccg gtgcgttcat tgtgctcgtc tcagcaaccg tcgccaggtt cggaatcgag
      301 gggctattgc tcacggtcct ggtatcggga ctgatgctga ccgtgatcgg ggcgcttcgc
      361 gttggcgcgc tcatccgtta tatcccccat gccgtaaccg tcggcttcac ctgcgggatc
      421 gccgtcacca ttctcgccag tcaactcaga gacctctccg gtctgacttt ggccggagcc
      481 gagccgggtc ctctactggc gaaacttgca gcgctctttt cggcaatttc cacgctcaac
      541 ccggccgccc tggccgtggg tgtcggatct gctgtgctga tttttctgct gcgctggtgg
      601 cgaccgagtt ggcccggcat gctgacggcc gtcgtcctag cctcggtcat cgtctgggcc
      661 gtcgggctac ccgtcgagac agtgggcagt catttcggtg ggattccgca cggcctgccg
      721 gtgccccatc tgcctccgct cgcaatggat caaatcctag cgattctgcc gaccgccctg
      781 tcgtttacgc tgctcggcgg agtcgagagc cttctgtccg caaaggtggc cgatggtatg
      841 accgcccgca agcatcgcta tcacatggag cttgtcgcac agggtatcgc gaatatcgca
      901 tccgcgctgt tcggcgggat cagcgtcacc ggaacgatcg cgcgcactgc gacgaacatc
      961 cgcgccggcg ccaaaagccc catgtccggt atcatgcatt cgctgttcct gctcgtcttc
     1021 atgctggtgg gagcatcgct ggcgtcattc gttccgcttt gtgcgctggc tggcgtgctg
     1081 gtggtcgttt gctggaacat ggcggaaaag aaggaatttg cttcgcttct ccgcgactgg
     1141 cggaccgctt ccgtcctgct tgcaaccttc gggcttacgt tggccgagga cctcaccact
     1201 ggaatcatta ccggttgcgt agtggctggg attattgccg tgttcaatcg cgcaatacct
     1261 gcggaggaca tgtaatccgc atccccagtt gggcgttcgg cggtcgatcc aggagcgtgc
     1321 cctgtcggta cttcaatcca tgagtacacg aactagccac caaggaactg gcacccatct
     1381 acttcgcata gtcactctgc ccgcggatcg tatggcgcca tgttcatatg gggagatcaa
     1441 cgcgctattc agctagatgt aagtcaccag acccatgaag ccttcgtcct gatgatcttg
     1501 atggtggcag tgcaaaagtg aaggacccgg atcatcggca acgaaatcga cttcgacgct
     1561 gctgaacctc gtcatgttga cagtgtcctt catcaccccc gaggttttct tgtctccgat
     1621 cttcgtcagc tcgaaggtat gccggtgcag gtgaatggga tgattgtcgc cactcttgtt
     1681 ggtcatcacc aggcgatatc gtttgccgac ttccgtggtg agcaattgcc gcgtcgacgg
     1741 ccatgagttg ccattgagcg tccatctatt gtagccgccg cggcccccgg gcactttctc
     1801 aaacagcagt tcgagccggt ggtcgggctc cggcggcgca cggtcggtgc caaagacggt
     1861 gtagtcccat ggcgtattgg gcgggtcctg ccattgcggt tcaccgtgtt cgttcgcgta
     1921 ttcgatgacc accccgagcc ctatcttgcg gtcatcttcc cgcacactcc cgagaatcca
     1981 aacgccgcga tgattcatct caacgatcac gtccgcacgc tcggcaggcg cgaggaatag
     2041 cgcgtcgatg gagcggggcg tagggactgg attgccgtca agcgcgacga cgttgagccg
     2101 gtgccccgcc agcgccactg tgatgttctg ggtcgggctc gcgttcagca agcggaacag
     2161 gacgcgctcg ccttggcgc
//
LOCUS       DATAVD010000607         6982 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1358835, whole genome shotgun sequence.
ACCESSION   DATAVD010000607 DATAVD010000000
VERSION     DATAVD010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6982)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6982)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6982
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1358835"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            21..1096
                     /locus_tag="VHX39_11325"
     CDS             join(21..396,396..1096)
                     /locus_tag="VHX39_11325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611739.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEX3991750.1"
                     /translation="MINKGKHAASALMKARILLKADVSEAGEGWSDSRIVKALDTSPA
                     TVSRTRQRLVEEGFDAVLTRKHSPNSARKRIFDGAAEAKLIALACSPPPRGRVRWTLE
                     LLEDKVVELKIVDRASDNTIGRTPKKNVLKPHLNKQWVIPPDASAAFVAAMEEVLAVY
                     HRPRDPACPLVCLDEASKQLIADTRVPIPAKPGRPARIDYEYERNGTANIFMLFAPLE
                     GWRHIEVTDRHTAVDYAHLLRQLSDVWFPHAPKIALVQDNLNTHRPASLYEAFPPGEA
                     RRLVERFEWHYTSKHGRWLNMAESELSVVSGQCLDRRIPDKQSLTDEIAAWERDRNNK
                     HANADWQFTTADARIKLKRLYPTL"
     gene            complement(1188..1790)
                     /locus_tag="VHX39_11330"
     CDS             complement(1188..1790)
                     /locus_tag="VHX39_11330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF938 domain-containing protein"
                     /protein_id="HEX3991751.1"
                     /translation="MQRGNRSAPAAVRNREPILLVLRDCLPRSAHVLEIASGTGEHAV
                     WFSRALPEVTWQPTDHDEEALQSIAAWRDLTELPNLMPPLFLDAAADNWPVAEADAVI
                     AINMVHITPWTTTQGLISGAARVLSSGGVLFLYGPFSEGGVHSAASNARFDADLRTRD
                     PSWGVRDLDELSALAGQHGLNPPERIAMPSNNLSLVFRRR"
     gene            complement(1859..2686)
                     /locus_tag="VHX39_11335"
     CDS             complement(1859..2686)
                     /locus_tag="VHX39_11335"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3991752.1"
                     /translation="MPVIDVQVHPFERNHPGRPWAGPSHGLESASGDEMVAAMTKVGV
                     DGAIMVSSFSAYRFDPSYALEVYNAYPDKFRVVTPVDPTDPAIDDVVTKWAGTKGARG
                     IRIILRDGMPMEGDDPGLNRAFAAAAKHGLPVNMLCWGILDKGLPHIQRHPDTVIVID
                     HLGLLQPARPPVPADVWAELPRLLDLTQYPNVRVKVSGACTMSHQPFPYDDIWDPVLR
                     IIDAFGLERCMWGTDWTRTIGMLTYEQGVAPFRNTTRLSESDKATLMGGTVQKVYNW"
     gene            complement(2818..4017)
                     /locus_tag="VHX39_11340"
     CDS             complement(2818..4017)
                     /locus_tag="VHX39_11340"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3991753.1"
                     /translation="MRRRRLLQAATSALAMPYVARAAENGVTDTEIRIGGTAAYSGPA
                     SAYGVIGKAHTATWNWFNEQGGVNGRKVKFLSYDDAYTPSKAIEQVRRLVEEDDVACL
                     CNTLGTAANSGFLKYVNQKHIPHLFVGSGADKFQDPKAWPWTIGFQPSYRVEARIFAK
                     YAMKEKPGGRIGLLYQNDDFGKDYLNGLRDAFGDAFAKQVVTASYEVSDATIDSQVIS
                     LQGEKVDVLISAATPKFASQIIRKLADIQWKPLHILSDVSSSTGAVIEPAGPEKAIGL
                     ICCTYYKDPSDPRWKDDAGVKLWRGFMEKQIPGADLKDAFYCYGSAAVMTMIPVLRQC
                     GNDFSRENLMKQAANLKDVEVPLLLPGIRVNTSPTNYHTIGQVQMMRWTGKSWDLFGD
                     VIGANSI"
     gene            4218..5105
                     /locus_tag="VHX39_11345"
     CDS             4218..5105
                     /locus_tag="VHX39_11345"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3991754.1"
                     /translation="MKVGFIGVGNMGGPMCRNIIRNTNHEAILFDLNPAALQECTDLG
                     AAAATSVADVAGHCDVVFTSLPIPRVVEEVTLGPAGIAANARPGTVFIDLSTNSPATA
                     RRVHEGMKAKGIGMLEAPVSGGTARAKDGTIVIMVGGDASVFEQQLPLLKSFSGEVVH
                     VGEIGMGSAAKLINNMLAFCNAAAAAEALMLGKRTGIDLHKLDAVIRNASGMSSAYNG
                     MATKALKGEFQATFALDLAHKDLRLALEMADELGVPGMIAPQVMNLMRMARGMGLGSD
                     DSASVIRVYEKALNEEVRG"
     gene            5449..5748
                     /locus_tag="VHX39_11350"
     CDS             5449..5748
                     /locus_tag="VHX39_11350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991755.1"
                     /translation="MTISITGEATGEYSPRLMPHVELATDEAKAFLLALCDRGSPTLI
                     ADSRSGVRVEFAVTEEGPVFAVSKPGQERSLRRFNAGWNFDLTAMAANLLADLGP"
     gene            complement(5930..6391)
                     /locus_tag="VHX39_11355"
     CDS             complement(5930..6391)
                     /locus_tag="VHX39_11355"
                     /inference="COORDINATES: protein motif:HMM:NF016001.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family deazaflavin-dependent
                     oxidoreductase"
                     /protein_id="HEX3991756.1"
                     /translation="MTEAKLAPNLPQWMIDHANRYISSAGTDGHMYKANPPGYGERHV
                     PSLLLTTTGRKSGEKFIFPLYYGETGNSYIIVASKGGAPDHPSWYKNLVVNPEVEVQV
                     GTKRLTAKARTTSGAERTRLWEEALKFWPPYADYQKKTEREIPVVVLDPVN"
     gene            complement(6496..>6982)
                     /locus_tag="VHX39_11360"
     CDS             complement(6496..>6982)
                     /locus_tag="VHX39_11360"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3991757.1"
                     /translation="NVPVTPAAGVRSGDGSFDDCLAVARVVLAAYQVGGMLEMLDMSV
                     NHSNTRVQFGTPIGRFQRVQDHIIRLLNAMDSAKWTTYEAAWAIEAGRDGIARSYLAA
                     STASDSYFEAANAAHEVHAAIGSDPRYGLTLYTRISRTMYELLGPPGWQRQRMADTLA
                     W"
BASE COUNT         1394 a         2072 c         2078 g         1438 t
ORIGIN      
        1 agcgcgccac acttgaggcc atgatcaata agggcaagca cgccgcctct gcgttgatga
       61 aggcccgcat cctgctcaag gcggatgtgt ctgaagccgg cgaaggatgg agcgacagtc
      121 ggatcgtcaa agcgctggac accagcccgg ccacggtgtc gcggacgcgc cagcgtctgg
      181 tcgaagaagg cttcgatgcc gtcctgacgc gtaaacattc accgaactcc gcccggaagc
      241 gtatcttcga cggcgccgcc gaggccaaac tgatcgccct ggcgtgctcg cccccgccca
      301 ggggacgagt gcggtggacg ttggagttgc tcgaagacaa agtcgtggag ctgaagatcg
      361 ttgaccgcgc gagcgacaac acaattggac gaacgctaaa aaaaacgttc tcaaaccgca
      421 cctgaacaaa cagtgggtca ttccgcctga cgccagtgcc gcgttcgtgg ccgccatgga
      481 agaggtactg gcggtttatc atcggccacg cgacccggct tgcccgctgg tgtgtctcga
      541 cgaggcctca aagcagttga tcgccgatac gcgtgtgccg atcccggcga agcctggccg
      601 gccggcgcgg attgattacg aatatgaacg caacggaacg gccaacatat tcatgttgtt
      661 cgcgcctctg gagggatggc ggcatatcga ggtcaccgat cgtcacaccg ccgtcgatta
      721 cgcccacctg ctcaggcaat tgtccgacgt ctggtttccg cacgcgccga agatcgccct
      781 ggtccaggat aatctcaaca ctcacaggcc cgcgtcactt tacgaggctt ttccgcccgg
      841 cgaggcccgc cgcctggttg aacggttcga gtggcattac acgtccaaac acggcaggtg
      901 gctgaacatg gcggaaagcg aactcagcgt ggtttcgggc cagtgcctcg accggcgtat
      961 ccccgacaaa cagagcctga cggatgaaat cgcggcctgg gagcgagacc gtaacaacaa
     1021 acacgccaac gccgattggc aattcaccac agcggatgcc cggatcaaac tgaagaggct
     1081 ataccccaca ttatgaatga ctcggggtac tagcccagta ctcaacgatt gcttgtccgg
     1141 ttgggcagaa gccaagagac atcccgcgaa gcgccggcgc caaccattca tcgtcgacga
     1201 aacaccaggc tcaggttgtt cgagggcatc gcgattcgtt cgggtgggtt gagtccatgc
     1261 tgaccagcaa gcgcgctgag ttcgtccaga tcgcgcacgc cccaggacgg gtcgcgcgtc
     1321 cgcaaatccg catcgaacct cgcgttgctg gccgcggagt gcacgccccc ctcactgaac
     1381 ggcccataga ggaacagcac gccaccagac gacaggaccc gtgccgcgcc actgatcaac
     1441 ccctgtgtgg tggtccatgg tgtgatatgg accatattga tcgcgatgac ggcgtctgcc
     1501 tcggctacag gccagttgtc cgcggcggcg tcgagaaata gtggcggcat cagatttggc
     1561 agttctgtca ggtcacgcca agccgcaatg ctttgcaagg cctcctcatc gtggtcggtc
     1621 ggttgccatg tcacctcggg caacgcgcgg ctgaaccaca ctgcatgctc gccggtgccg
     1681 ctggcgatct ccaacacatg cgctgaccgc ggcaggcaat cgcgcagcac aagcaagatc
     1741 ggctcacgat tgcgcaccgc ggcaggtgca gatctgttac ctcgctgcat ccgagttgca
     1801 actcctttgg tgatggcgcg acccggcggc gtgcgacgaa ccgcagcgat cgatcacatc
     1861 accaattata tactttctgc accgttccgc ccatgagcgt cgccttatcg ctctctgaca
     1921 agcgcgtcgt attgcggaat ggcgccacgc cttgctcgta ggtcagcatc ccgattgtcc
     1981 gcgtccagtc tgtgccccac atgcaacgtt ccagtccgaa cgcatcgatg atccgcagta
     2041 ccggatccca gatatcgtca tatgggaacg gttggtgcga catcgtgcag gcgccgctga
     2101 ctttcactct tacgttcggg tattgagtca ggtcgagtag cctgggcagt tcagcccaaa
     2161 cgtcagcagg aaccggcggc cgagccggct gcaacaaacc gaggtggtcg atcacgatga
     2221 ccgtgtccgg atgccgttgg atatgtggca gacctttatc caggatgccc caacacagca
     2281 tgttgaccgg cagaccgtgt ttcgcggcgg cggcgaacgc gcggttgagg cctggatcgt
     2341 ccccctccat cggcatgccg tcgcgcagga tgattcggat accgcgcgca cccttggtgc
     2401 cggcccattt cgtaaccaca tcgtcgattg ccggatcagt cggatcaacc ggggtcacaa
     2461 cgcggaattt atccggatac gcgttataaa cttcgagcgc ataactggga tcgaaccgat
     2521 aggcactgaa tgaagatacc atgatcgcac cgtcgacgcc aaccttggtc atcgccgcca
     2581 ccatctcgtc accgctggca gactcgagcc catgcgaagg cccggcccag ggccgaccgg
     2641 ggtgattacg ttcgaaggga tggacctgaa cgtcgatgac tggcatggcc gttctcctgt
     2701 tggttcgacc cattgtccga tatcacaacc ggcttgccca gagggaccgg gccgaaggca
     2761 tcgatcaaac tgttgcgttg gccgaccgac tgaattgaaa ccttgccgcc aggttgatca
     2821 gatggaattg gctccgataa catcgccgaa caggtcccaa ctcttaccgg tccatcgcat
     2881 catctggacc tgtccgatcg tgtgatagtt tgttgggctg gtattgacgc ggataccggg
     2941 cagcaacagc ggcacctcga catctttcag attcgctgcc tgcttcatca aattctcgcg
     3001 ggagaagtcg ttgccgcatt gcctcagcac tgggatcatc gtcatcaccg cggcggatcc
     3061 gtagcaatag aaagcgtctt tcagatcggc gcctggaatt tgcttctcca taaagccgcg
     3121 ccagagcttt actcccgcat catccttcca acgcggatcg gacgggtctt tgtaatacgt
     3181 gcagcaaatc aatccgatcg ccttttccgg cccggcgggt tcaatcaccg ctccggttga
     3241 tgacgaaacg tcggacaaaa tatgcaatgg cttccattgg atatctgcca gcttgcgaat
     3301 gatctggctg gcgaattttg gcgtcgctgc cgagatcaga acatcgacct tctcgccttg
     3361 caacgaaatt acctggctgt cgatggtcgc gtcgctgacc tcgtatgacg cagtgacgac
     3421 ctgcttggcg aatgcatcgc caaatgcgtc gcggagaccg ttaaggtaat ccttgccgaa
     3481 gtcatcgttc tgatacagca atcctatccg cccgcccggc ttctccttca tcgcgtattt
     3541 cgcgaagatg cgggcctcga cgcggtagct gggctgaaat ccaatggtcc agggccaggc
     3601 tttcggatcc tgaaacttat cggcgccgga gcccacaaac aaatgcggga tgtgcttttg
     3661 gttgacgtat ttcagaaaac ccgaattcgc cgccgtccct agggtattgc acaggcaggc
     3721 gacatcgtct tcctcaacca gacggcggac ctgctcgatc gctttcgatg gtgtgtaggc
     3781 atcgtcataa gacagaaact tcaccttgcg cccgttcacg ccgccttgtt cgttgaacca
     3841 gttccaggtc gcggtgtgtg ccttgccgat cacgccatac gccgacgctg ggccgctata
     3901 agcggcggtg ccgccgatac ggatttcggt gtctgtgaca ccgttttctg cagcgcgcgc
     3961 gacatagggc atagcgaggg ctgaggtggc ggcttgtagc agtcggcggc gacgcattgc
     4021 gattgttctc cagattttcc gtaggcttcc tgggtattgt gaccacaggt gccaatgaaa
     4081 gcaatcgcgc gcgcggcata ctccggtctc ctggaacatc cgttcacggc cccggcaggc
     4141 tgacagcacg cggctttggc ggcatggtgt gagtggcgct gccgggtaca ccggcgcgga
     4201 gcgaggagac gttggaaatg aaggtcggat ttatcggcgt cggcaacatg ggcggtccta
     4261 tgtgccggaa catcattcgc aacacgaacc atgaggcgat cctgttcgac ctcaatccgg
     4321 cggcattgca ggaatgtacc gatcttgggg cagcagcggc cacatcggtc gctgacgtcg
     4381 caggtcattg cgatgttgtg ttcacatcgt tgccgatacc gcgcgtggtg gaggaggtga
     4441 cgttgggacc ggccggcatc gcggcgaacg cgcggccggg caccgtcttc atcgatttgt
     4501 cgacgaattc gccggcgacg gcgaggcggg tgcatgaggg catgaaggcc aaaggtatcg
     4561 gcatgctgga agcaccggtc tccggcggca cggcgcgggc caaagacggc acgatcgtca
     4621 tcatggtggg tggggatgct tcggtgtttg agcagcaact gcccttgttg aagtcgttca
     4681 gtggtgaggt cgtgcatgtc ggcgagatcg gtatgggttc tgcggcaaag ctgatcaaca
     4741 acatgctggc tttctgtaac gcggctgctg ctgccgaggc actgatgctt ggtaagcgca
     4801 ccggcatcga tttgcacaag ctcgacgcgg tgattcgcaa cgccagcggt atgtcgtcag
     4861 cgtataacgg catggcaacg aaagcgctca agggcgagtt tcaggcgacc ttcgcgcttg
     4921 acctcgcaca caaagatctt cgtctcgctc tcgaaatggc cgatgaactg ggagttccgg
     4981 gaatgatcgc gccgcaggtg atgaatctga tgcggatggc tcgtggtatg gggctaggat
     5041 ccgatgattc ggcatcggtg atccgggtgt acgagaaagc cttgaatgag gaagtgaggg
     5101 ggtgattttg ttgccaaatc agcgcggtcg atcggcggcc gcgccggtca gtttcccagt
     5161 tccggacacg caaccgctca tttcttgccg aggggtattg cgatgaccct cagacccatc
     5221 ccaggcgctc caatcgacgc accgataccc gattttccaa ccggtgagcc aggtccgctg
     5281 gttatgccaa catcccaata tacgtgccgt tcggttgagc catcgccgtt ttctgattca
     5341 ccgccggggc caattcggcg gccaggaccg gtctcaattc gcggcactgg caacatcgcg
     5401 cttattttcc gatgcattcc cgagataccc gccatcaatc ggtcgagcat gaccatctcg
     5461 atcactggcg aggcgacggg ggaatattcc cctcggttga tgcctcacgt cgaactggca
     5521 acggacgaag ccaaagcatt cttgctggcg ttgtgcgacc gagggtcacc gaccctcatc
     5581 gccgacagcc gaagcggggt tcgggtcgaa tttgccgtca cggaagaggg accggtattc
     5641 gccgtcagca agccaggtca ggagcgcagc ttgcgccggt tcaatgcagg ctggaacttt
     5701 gacctgacgg cgatggcggc gaacctactc gctgatcttg gcccataatc cgagcccgca
     5761 caggctgcat ttggtgtgta gccctgggtt ttgcgcaagc cgtaaggcgt cgatccaggc
     5821 ctttgggtca gtttcaaacg ctgtcaatct gaaacgacta ccagcccccc cctttcgagt
     5881 gccgagcctt gatcaacgaa aacgctcgcg attgcttcgc ctccgtcgtt cagttgacgg
     5941 gatccagcac aacgacgggg atctcgcgtt cggtcttctt ttgatagtcc gcatacggcg
     6001 gccagaattt cagggcttcc tcccagaggc gcgtacgttc tgcgccgctc gttgtccgag
     6061 cttttgcggt gagccgcttc gtaccaactt gtacctctac ctcgggattg acgacgaggt
     6121 tcttgtacca actgggatga tccggtgcac cgcccttgga tgcgacgatg atatagctgt
     6181 tcccggtttc gccgtagtac agcggaaaaa tgaacttttc tcctgacttt cggccggtgg
     6241 tggtcaaaag caacgagggg acgtgtcgtt cgccgtatcc aggtgggttg gctttgtaca
     6301 tatgcccgtc ggtacccgca ctggaaatgt agcggttcgc gtggtcgatc atccactgag
     6361 gaaggttcgg ggcgagcttc gcttcggtca tggtcgatct cctgttgctt tgagggagca
     6421 tatcacggtc cggaccgggt caccaatcgg gcactcaacc gacaacgtgc cggacgtagc
     6481 ctgccaactc ggcggttacc aggccaatgt gtccgccatt cgctgacgct gccagcccgg
     6541 aggacccagc aactcgtaca tcgtccgaga aatccgtgtg taaagcgtca gaccgtatcg
     6601 tggatcactg ccaatcgcgg cgtgcacctc gtgagcggca ttagctgcct cgaaataact
     6661 gtcgctggcg gttgatgcgg cgaggtagct gcgggcgatc ccgtcgcggc ctgcctcgat
     6721 agcccaggct gcctcatatg tcgtccattt cgcagaatcc atggcgttca ggagtcggat
     6781 gatgtggtcc tgcacgcgct ggaatcggcc aatcggggtg ccgaactgca cccgggtgtt
     6841 gctgtgattc accgacatgt cgagcatttc gagcattccg cctacctggt acgctgccaa
     6901 cacgacgcgc gcgaccgcta ggcaatcatc gaacgatccg tcacccgaac gaactcccgc
     6961 tgcaggggtg accgggacgt tg
//
LOCUS       DATAVD010000608         2485 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1733257, whole genome shotgun sequence.
ACCESSION   DATAVD010000608 DATAVD010000000
VERSION     DATAVD010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2485
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1733257"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..956)
                     /locus_tag="VHX39_11365"
     CDS             complement(93..956)
                     /locus_tag="VHX39_11365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase"
                     /protein_id="HEX3991758.1"
                     /translation="MAHSATTSDGGPDHLSQRNFQRLATFIEGYSGIKMPPTKMTMIE
                     GRLRRRLRATGMTDLKQYCDFLFEKDGLATEAIHLIDVMTTNKTEFFREPDHFRFLTE
                     QAVPRLLSTARGGTTALKIWSAACSTGAEPYTLAMVLADLAQQNTGLHFGITATDIST
                     EVLDVAVAGIYPEAMVAPVSPEFRHRYVLRSKDRSRRMVRMAPEVRAAVRFARVNLME
                     VPYQVERDMDIIFCRNILIYFDKETQQAVLQHLSEHLRPGGFLFLGHSETLAGFHLPV
                     EPVGPTVFRRR"
     gene            complement(961..>2485)
                     /locus_tag="VHX39_11370"
     CDS             complement(961..>2485)
                     /locus_tag="VHX39_11370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3991759.1"
                     /translation="RSVLAAPTPEMAKHYDDEIVDGRKTLQAHVDQLDAIASLSGRQK
                     LAVFKAGWEKYVPLQDKFRDLAARDHAQAAELSYGALKTLVDDGKAQLGEIATLNEQF
                     MANSKDDASQQYRNARVLLISALLISLVIAISTATWIALSIGRGLSRAGGLAQAVAGG
                     DLTQTAEVGSRDEIGDLISHVNAMVERLRVVVSEALTAAENVSSGSQQLSAGSESLSQ
                     GATEQASAAEQASSSMEQMASNIKQNADNAGETEKIARQSALDAQKSGEAVANAVQAM
                     QTIAEKITIVQEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQTAATE
                     IGTVSSQTVKAAREAGEMLSQLVPAIRKTAQLVTEISAACNEQTIGAEQINQAIQQLD
                     KVTQQNATASEQMSATSEALAAQAEQLQSNIAYFRLDDGANAKLPVVSQRAVIASAPR
                     RAIRPVGGLVVPAKPVRPLTPKSANGRIGNERAKGNGFALNLTRGGADQHDAEFERM"
BASE COUNT          439 a          786 c          742 g          518 t
ORIGIN      
        1 cgggatcggc ggagaggatc gccgacatgg tctgccgtac cgaggcagaa tcgtcgacga
       61 tcagaacgcg gacctggcgt ttcatcgcag cactaccggc gccggaacac ggtcgggccc
      121 accggttcca ccggcaaatg gaacccggcc agcgtttccg agtggcccag aaacaagaac
      181 cctcctgggc gcaaatgttc gctgagatgc tgcaacaccg cctgttgtgt ttccttgtcg
      241 aaataaatca ggatattgcg gcagaagatg atgtccatgt cgcgctcgac ctgatacggc
      301 acctccatca ggttgacgcg ggcgaaccgc accgcggcac gcacttcggg tgccatccgc
      361 accatccggc gggaccgatc cttcgagcgc aaaacgtaac ggtggcggaa ctcaggcgac
      421 actggcgcga ccatcgcttc cggataaatg ccggcgacgg cgacatcgag cacctcggtg
      481 ctgatatcgg tggcggtgat gccgaagtga agtccggtat tctgttgcgc cagatcggcc
      541 agcaccatcg cgagtgtata cggttcggcg ccggtcgagc acgctgcact ccagattttc
      601 aatgccgtgg tgccgcccct tgcggtggac agcaaacgcg ggaccgcttg ttcagtcagg
      661 aaccggaaat gatcgggttc gcggaagaac tccgtcttgt tcgtggtcat cacgtcgatg
      721 aggtggatgg cctcggtggc gagcccatcc ttttcgaaca gaaaatcgca atattgcttc
      781 aaatccgtca tgccggtggc gcgcaaccgg cgacgcaacc ttccctcgat catggtcatc
      841 ttggtcggcg gcatcttgat gccgctgtag ccctcgatga acgtcgccag ccgttggaag
      901 ttgcgctggc tcaggtggtc gggaccgccg tccgatgttg ttgcggaatg tgccacgagg
      961 ctacatccgc tcgaattcgg cgtcgtgctg atcggcgccg ccgcgcgtca ggttgagcgc
     1021 aaacccattc cccttggcgc gttcgttgcc gatgcgtcca ttcgctgatt tgggcgtcaa
     1081 cggcctcacc ggtttcgccg ggacaacgag gcccccgacc ggccgaatgg cgcggcgcgg
     1141 tgcgctggcg atcaccgcgc gttgggacac gacaggtagt ttcgcgttag cgccgtcgtc
     1201 cagccgaaaa taagcaatat tcgactgcaa ctgttccgcc tgggccgcca gggcttccga
     1261 ggttgccgac atttgctcgg acgcagtggc gttctgttgc gtcactttgt cgagttgctg
     1321 gattgcctga ttgatctgtt ccgcgccaat agtctgttcg ttacaggcgg cgctgatttc
     1381 cgtcaccaat tgcgccgtct tgcggatggc cggcaccaat tggcttaaca tctcgcccgc
     1441 ctcgcgtgcg gcctttacgg tttgcgacga caccgtgccg atctcggtcg ccgcggtctg
     1501 actgcgctct gccagtttgc gaacctccga ggctacgacg gcaaaaccct tgccgtgttc
     1561 accggcccgc gccgcctcaa ccgcagcatt cagcgccagc agatcggtct ggcgggcaat
     1621 ctcctgcacg atggtgatct tttccgcgat ggtctgcatt gcctgcacgg cattcgccac
     1681 ggcctcgccg cttttctgcg catccaacgc tgactggcgc gcgatcttct cggtttcacc
     1741 ggcgttgtcg gcgttctgct taatgttcga cgccatctgc tccatcgagg aagatgcctg
     1801 ctcggccgcc gacgcttgct cggtcgcgcc ctgcgacagc gattccgagc ccgccgaaag
     1861 ctgttggctg ccggacgaga cgttttccgc tgcggtcaac gcctccgaca cgacgacgcg
     1921 cagccgttcc accatggcat tgacgtggct gatcagatca ccaatctcat cccgcgatcc
     1981 aacctcggcg gtctgcgtca gatcgccgcc agcaaccgcc tgggcgagcc caccggcgcg
     2041 gctaagaccg cgaccgatac tgagtgcgat ccaggttgcg gtcgaaatcg cgataaccag
     2101 cgatatcagc aacgccgaga tgagcagcac gcgggcgttc cgatattgct ggctcgcatc
     2161 gtccttggaa tttgccatga actgctcgtt cagggttgcg atttcgccga gttgcgcctt
     2221 gccgtcatcg acaagagtct tcagggcgcc gtacgacaat tcggccgcct gtgcatgatc
     2281 gcgagccgcc aggtcacgaa acttgtcctg caatggaacg tacttttccc atccggcttt
     2341 gaacacggcc aacttctgcc ggccggacag agatgcgatt gcatcgagct ggtccacgtg
     2401 ggcttgcaat gttttacggc catcaacgat ctcatcgtcg taatgcttcg ccatctcagg
     2461 cgttggcgcg gcgaggacgc tgcgc
//
LOCUS       DATAVD010000609         1715 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2849028, whole genome shotgun sequence.
ACCESSION   DATAVD010000609 DATAVD010000000
VERSION     DATAVD010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2849028"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..495)
                     /locus_tag="VHX39_11375"
     CDS             complement(<1..495)
                     /locus_tag="VHX39_11375"
                     /inference="COORDINATES: protein motif:HMM:NF022853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
                     /protein_id="HEX3991760.1"
                     /translation="MKRLLMAMLMVLAAGSAHALESAPVSSKRALATLVTETDAMQPG
                     KPFRVALRLRMADGWHTYWKNPGDAGVAPDLTIAGVTQSPIDWPTPRRVAEGPVMTYA
                     YTGEVLLPVTVTAETGVLKAHADWLVCKDICVPEQGDFALTLPVGTSKPSAQAALFAA
                     HDRAV"
     gene            620..>1715
                     /locus_tag="VHX39_11380"
     CDS             620..>1715
                     /locus_tag="VHX39_11380"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3991761.1"
                     /translation="MTNGFGGDCLAGVRVLDMTQFEAGPSCTETLAWLGAEVVKVENP
                     KGGDPGRSLSGKPGVDDPYFLHFNANKKSITVNLKDPRGLQLLKDLAAKADVLVENFA
                     PGAIERLGLGADVIRALNPSIIYCQVKGFGEGSPYEKNLAFDMIAQACSGIMSTTGEL
                     DGRPLKPGPSLGDTGTGMLLSISILGALYRRKATGQGDHLQVAMQDAMLHYMRIAFSQ
                     QARTGKPAPRAADKSVTGGNPPMGTFPSKGGGPNDYVYVYTSRANPEHWRRLLAVIGR
                     EDLVGDPRYDTPAALSERAAEVDEMVAAWTRRHTKHEAMEIIGAAGIPAGAVLDTMEL
                     QNDPTFEQRGIMQTIDHPVVGPFKMIAWPVR"
BASE COUNT          313 a          553 c          553 g          296 t
ORIGIN      
        1 cacggcccga tcatgcgcgg cgaacaaggc cgcctgcgcc gacggttttg acgtgccgac
       61 cggcagggtc agtgcgaagt cgccctgttc cggcacgcag atgtccttgc ataccagcca
      121 gtccgcatgc gccttcaaca cgcctgtctc ggcggtaacg gtgaccggca gcagcacctc
      181 accggtatag gcataggtca tcaccggacc ttcggcgacg cgtcgtgggg tgggccagtc
      241 gatcggtgac tgggtgacgc cggcaatcgt caggtcgggc gccacgccgg catcgccggg
      301 attcttccag tacgtatgcc agccgtccgc catgcgcagg cgcaaggcta cgcggaacgg
      361 tttccctggc tgcatcgcat cggtctcggt gaccagtgtg gcgagtgcgc gtttgctgct
      421 gaccggtgcg ctttccagcg catgcgccga acccgccgcc aacaccatca acatcgccat
      481 cagaagccgc ttcataccgt ctccgcctgc cgtgaacggc gcagatatgc gcttacaccc
      541 gccgcgttgc cagccgtggg gcttaccttc cgggattttt cgctctagcg ttccggcaag
      601 tgagcaagag gggaaaccaa tgaccaacgg ctttggaggc gattgtctcg ccggcgtgcg
      661 ggttctggac atgacgcagt tcgaggccgg tccgtcctgc accgaaaccc tcgcctggct
      721 gggcgccgag gtggtgaagg tcgaaaatcc caaaggcggc gacccgggcc gctcgctcag
      781 cggcaagccc ggcgtcgacg atccgtattt cctgcacttc aacgccaaca agaaatccat
      841 cacggtcaat ctgaaggatc cgcgaggcct gcaactgctg aaggatctcg ccgccaaggc
      901 cgacgtgctg gtggaaaatt tcgctcccgg tgcgatcgag cggctgggtc tcggcgccga
      961 tgtgatacga gcgctgaatc cgtcgatcat ctactgccag gtcaagggct ttggcgaagg
     1021 cagcccgtac gagaaaaatc tcgctttcga catgatcgcg caagcgtgta gcgggatcat
     1081 gagcaccacc ggcgaactcg acgggcgtcc gctgaagccg ggtccgtcac tgggtgatac
     1141 cggcaccggg atgctgctgt cgatttccat ccttggggcg ctgtaccggc ggaaggcgac
     1201 ggggcagggg gatcatctgc aagtggcgat gcaggacgcc atgctgcact acatgcgtat
     1261 cgcattttct cagcaggccc gcaccggcaa gccggcgccg cgcgccgccg acaagtcggt
     1321 caccggcggc aacccgccga tggggacgtt ccccagcaag ggcggtggtc cgaacgacta
     1381 tgtgtatgtc tatacatcgc gcgccaaccc cgaacactgg cgtcggctgc tggcggtgat
     1441 cggtcgcgaa gacctggtcg gcgatccgcg ctacgacacc cccgctgccc tgtcggagcg
     1501 ggcagcggaa gtcgacgaaa tggtcgccgc ctggacccgc cggcacacca agcacgaagc
     1561 catggagatc atcggtgccg ccggtattcc ggccggtgcg gtgctcgaca cgatggagtt
     1621 gcagaacgac ccgacgttcg agcagcgcgg catcatgcag accatcgacc accccgtggt
     1681 gggaccgttt aagatgatcg cgtggccggt tcgct
//
LOCUS       DATAVD010000610         3944 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3034164, whole genome shotgun sequence.
ACCESSION   DATAVD010000610 DATAVD010000000
VERSION     DATAVD010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3944)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3944)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3944
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3034164"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..342)
                     /locus_tag="VHX39_11385"
     CDS             complement(<1..342)
                     /locus_tag="VHX39_11385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007425027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX3991762.1"
                     /translation="MPRGRPREFDPDDTVERAMGVFWSCGYHGTSLPDLLEATKLSRG
                     SLYAAFGDKHELFLRALDRYIDDALTRLDTELDPRKDALTGLRACLAGYVDRTSGVKG
                     RRGCLVVATAME"
     gene            complement(879..1070)
                     /locus_tag="VHX39_11390"
     CDS             complement(879..1070)
                     /locus_tag="VHX39_11390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991763.1"
                     /translation="MTVIQISDRELTRLRVMIGLADGRLTLETAATLMCMGRRQVFRL
                     LRGERSAVRAWPMTMDAGT"
     gene            complement(1551..2747)
                     /locus_tag="VHX39_11395"
     CDS             complement(1551..2747)
                     /locus_tag="VHX39_11395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HEX3991764.1"
                     /translation="MPREGLEVADVFRRFGPAFREQHGASLSGARRRAMIAIESCRTA
                     ALGGHVERCGDCGHQRIAYDSCRNRNCPRCQGLARAQWIADRKAELLDVPYFHVVFTV
                     PAEIEVIAFQNQTLVYDILFRAASETLRTIAADPKHLGAEIGFFGVLHTWGQNLLHHP
                     HIHFLVPGGGIAPDGGSWIACRPGFFLPVRVLSRMFRGRFLHYLEKAFAAGELNFFSA
                     HRHLHEPAAFRRYLAPVRNTDWVVYSKRPFAGPAQVLDYVGRYTHRVAISNNRLLSMD
                     NGKVRFRWKDYRDGNRQKIMTLDANEFVRRFLIHVLPDGFHRIRYYGFLGNCHRARKL
                     ERCRELLGMLPPEPAAEPSGDYRDRYEVLTGQSLRECPHCRTGIMVVIGCIARPGICL
                     PVPDTS"
     gene            complement(2758..3609)
                     /locus_tag="VHX39_11400"
     CDS             complement(2758..3609)
                     /locus_tag="VHX39_11400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEX3991765.1"
                     /translation="MIEDMRIRNLSPHTQRAYVEQVSRFARHFGQPPERLGQDEIRAW
                     QVYLVEERRLAASSISIAVAALRFVYTVSLKRPWVVEDDIPTSRQPKKLPVVPSPEEV
                     ARFLGAVKSPKHRMILTVCYATGLRISEAVSLKPAAIDSQRMVIRVEAGKGRKDRYVM
                     LSPTLLKLLRVYWKEAHPKDWLFPGERPEQPITACAVEIACRQALEQSGLAKAITPHS
                     LRHAFAVHLLESGADLRTIQLLLGHRSLNTTSRYLRIATSKVCATASPLEALHTMTAK
                     VPALMPA"
BASE COUNT          762 a         1214 c         1218 g          750 t
ORIGIN      
        1 ctccatggcg gtcgccacga ccagacatcc gcgcctgcct ttgaccccgc tggtgcgatc
       61 aacataacca gcgagacagg cgcgcaaacc cgtcagggcg tctttccgtg gatcaagttc
      121 cgtatcaagc cgcgtcagag catcgtcgat atagcgatcg agggcacgca gaaagagttc
      181 gtgcttgtcc ccaaaggcgg catacaggct cccgcgcgag agtttcgtcg cctcgagcag
      241 atcagggagc gacgtcccgt gatagccgca tgaccagaaa acgcccattg cgcgctcgac
      301 agtgtcgtcc ggatcgaact ctcgcgggcg gccgcgcggc atccgtggtg acgcttgctg
      361 tggcatgtcc tgtatgtgga ccgaatggtc gttaaatgca atcccgaata ccggtcaccg
      421 gcgggccgac gggtctgatc ggtatgggtt agcgtccgca ttcggccaaa cccggccgtg
      481 aaccgaatgt ccgatttcag cccatcctga tctgcaagcg gacagaccgc tccccaccac
      541 gaacggtcat agcctcattg aggtagaccc cagcggggcg atggcatgag acactttcca
      601 cgcctcaata gggtcaccta cggaattcta aggcggccgc atccgatggt cttgacccta
      661 ttggagcaaa atgaccgcgt aaagctgcgc tcgcaccggg tttctggcgg ggtttcggcc
      721 gccgtgcgcc ggccggcatc tattgcgcgt ccgtctcacc gaatttgcgt tgtgtctcag
      781 cgattgtgcg tcggacacct gcttccgtct cagctaatgt gcgccggaaa tggccatcta
      841 ttgcgcgtcg ggccatttac tattgcgcgc cgctacagtt aagtcccggc gtccattgtc
      901 atcggccacg cccgaacagc cgagcgttcg ccacggagca gccggaacac ctgacgacga
      961 cccatgcaca tcaacgtcgc cgcggtttca agcgtgagcc gaccatccgc aagaccgatc
     1021 atcacgcgaa gtcgggtcag ctcccgatcg cttatttgga tcaccgtcat ggtgcacctc
     1081 ccgggaccca gaaaccgggg gcagtgtcac cttaactttg cacaagggtg tcatcctagg
     1141 actaacccct ggttgtatac ttgagcccgt ctgagaaaac gcaacaacgg atcacctctc
     1201 gataacgtac agcgtttttc gcttggcggc gcggcgctcg gcctgtccgc gagggcttcg
     1261 cagctgatcc gcgccggtga gtgaaaaacg tgttggacta agccgcgacc ccggacgcca
     1321 gggttatggg cgtttaatgg cctcggcctg gctgaaagct tgtgccatcg gggcgttccg
     1381 gctgggcgga accattcggg acgccaacca agccttcaga gatgtcagca gcgtctggat
     1441 ctgaccagtt cggccaggca cgggcacctg aatgaccgac atggtccagg cgtcggcaac
     1501 ccgatctctc gggttgtttg gcttcgcgcg atgaaaacct cgtgacgggc tcacgatgta
     1561 tccgggactg gcaggcaaat cccgggtcgc gcgatgcagc cgatcaccac catgatgccg
     1621 gtccggcagt gcggacattc gcgcaatgac tgcccggtga gcacctcata acgatcgcgg
     1681 tagtcaccgg acggttccgc cgccggctcg ggcgggagca ttccgagcag ttcccggcag
     1741 cgctcgagtt tccgcgcgcg atggcagttg ccgaggaagc cgtagtagcg gatgcggtga
     1801 aacccgtccg gcagcacgtg gatcaggaag cgacgaacga actcattggc atccaacgtc
     1861 ataatcttct ggcggttgcc atcccggtag tctttccagc gaaaccggac cttgccgttg
     1921 tccatggaca ggagccggtt gttggagatc gcgacgcgat gggtataccg cccaacatag
     1981 tcgaggacct gggctggtcc ggcgaatggc cgcttcgagt agacgaccca gtcggtgttc
     2041 cggaccgggg ccaggtagcg ccggaacgcg gcaggttcat gcaggtggcg gtgcgcggag
     2101 aagaagttca gctctccggc ggcgaaagcc ttttccaggt agtgcaggaa ccggccccgg
     2161 aacatccgcg acaacaccct gaccgggagg aagaaccccg gtcgacaggc gatccagctt
     2221 ccaccatcgg gcgcgatgcc accgccagga acgagaaaat gaatgtgtgg gtggtgtaac
     2281 aaattttgtc cccaggtgtg caacacaccg aagaagccga tctccgcgcc cagatgcttt
     2341 ggatcggcgg cgatggtgcg cagcgtttcc gatgccgccc ggaacaggat atcgtaaacc
     2401 agggtctggt tctggaaggc gataacctca atctccgccg gcacggtgaa cacgacgtgg
     2461 aaatacggca cgtcgagcag ttccgccttc cggtcggcaa tccattgggc gcgtgccagg
     2521 ccctggcacc tggggcagtt acgattacga cacgagtcgt acgcgatacg ttgatgaccg
     2581 caatcgccgc aacgttcgac gtgaccaccg agcgccgccg tgcggcagct ctcgatcgca
     2641 atcatagcac gccggcgcgc gccggacagc gacgcaccgt gctgctcccg aaaagccggg
     2701 ccgaagcggc ggaacacgtc cgccacttcg agcccttcgc gaggcatgac ccggccgtca
     2761 ggcgggcatc agggcaggca ccttggctgt catggtgtgc aaggcttcca gcgggctggc
     2821 cgtggcgcag accttgctgg tggcgatccg cagataacga gatgtggtgt tcaggctgcg
     2881 atgccccagc agcaattgaa tggtacggag gtccgcgccg gactccagca gatggaccgc
     2941 gaacgcatgg cgcagggaat gcggagtgat cgctttggcg agaccggatt gctcaagcgc
     3001 ctgcctgcat gcgatctcga cggcacacgc cgtgatgggc tgctcgggcc gctcacctgg
     3061 aaacagccag tcttttggat gggcctcctt ccagtagacc ctcaaaagct tcaacagtgt
     3121 cggcgagagc atcacgtacc ggtccttccg gcctttgccc gcctctaccc ggatgaccat
     3181 ccgctggctg tcgatcgcgg cgggcttcag ggaaaccgcc tctgatatgc gcagccccgt
     3241 ggcgtagcac acggtcagga tcattcgatg ttttgggctt ttcaccgcgc ccaggaaccg
     3301 ggcgacttcc tctggactcg ggacaaccgg gagtttcttc ggctgccggc tggttgggat
     3361 gtcgtcttcg acaacccatg gccgtttgag gctgacagtg tagacgaacc ggagggcggc
     3421 caccgcgatc gaaatcgagc tggccgcaag tcgccgctcc tcgaccaggt aaacctgcca
     3481 ggccctgatc tcgtcctggc ccaaccgttc gggcggctgg ccgaaatggc gagcgaaccg
     3541 ggagacctgc tcgacgtaag ctctctgggt gtgcggtgag aggttacgga tccgcatgtc
     3601 ctcgatcatg cggcggcgaa gtggcgtcat tggcaactcc tctacgagat gaacagcgcc
     3661 acatggcgcc gaagcatcgt ctcgcagttg agttgtcagg ccaggggaag cggcggaccg
     3721 tcatcaccga ccgaaccttc gagattgaag aaccgcaggc tgggtcccgt gactcccgcg
     3781 tagcgggtta gtccaacgtc cgtaatcatg tttgatcggg tcggccttta taatgtttcg
     3841 cccgctccaa ttccccatgt gcctcgaagt cgttcgacgc ggtctcgttt ttttcatctg
     3901 cattgagttt tttatgatcc cggatttcgg ccgtgcgtcg tacc
//
LOCUS       DATAVD010000611         5381 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1920522, whole genome shotgun sequence.
ACCESSION   DATAVD010000611 DATAVD010000000
VERSION     DATAVD010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5381
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1920522"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..328)
                     /gene="mraW"
                     /locus_tag="VHX39_11405"
     CDS             complement(<1..328)
                     /gene="mraW"
                     /locus_tag="VHX39_11405"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytosine(1402)-N(4))-methyltransferase"
                     /protein_id="HEX3991766.1"
                     /translation="MTPTEGRNVAESKAIGTHIPVMLTEMLATLRPRDGAVYLDGTFG
                     GGGYTRAMLERAHCHVWAIDRDETAIARGAALAAQYPDRLHLLHGRFGDMLTMLTAAG
                     VHALDGI"
     gene            complement(325..816)
                     /locus_tag="VHX39_11410"
     CDS             complement(325..816)
                     /locus_tag="VHX39_11410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HEX3991767.1"
                     /translation="MALFNVTYVQNFDAKGRVSVPASFRIPLRAGAVSISANSEGPVS
                     VPLVLRPSEKAQCIEALTEVKHHALLAELEKLDPLSEEYDALATVLFADAWPIETDKE
                     GRIIIHDTLLSHAAISRTGSVAFVGMGVRFQLWNPDNVPGQKALAQSTNRARMARQRE
                     VTA"
     gene            complement(1312..1763)
                     /gene="rnpB"
                     /locus_tag="VHX39_11415"
     ncRNA           complement(1312..1763)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VHX39_11415"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(2055..2537)
                     /locus_tag="VHX39_11420"
     CDS             complement(2055..2537)
                     /locus_tag="VHX39_11420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEX3991768.1"
                     /translation="MTIKVGDTIPSMKLMMATADGPKEVATDDIFKGKKVVLFAVPGA
                     FTPTCSARHLPGFVQNADAIKAKGVDTIACIAVNDAFVMGAWGKSQGTEGKLVMLADG
                     SANFAKAIGLEMDITARGMGVRSQRYALIAEDGKVTHLGVEAPGGFEESKAETILAAL
                     "
     gene            2746..3543
                     /locus_tag="VHX39_11425"
     CDS             2746..3543
                     /locus_tag="VHX39_11425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3991769.1"
                     /translation="MKGKVAIVTGAGSVGPGWGNGRATATLLARQGAEVFLVDVNEAA
                     VRDTIAIIEKEGGTAHMHCCDMTVAADVQEMVQACVTRFKRIDILVNNVGGSAPGDPV
                     SMTEEVWDRQIDSNLKTTFLGCKYAIPVMLEQGKGAIVNIASVAGMRNDFLSGRSHVG
                     YSASKAGVIQLSRSVAGTYAKSNIRVNTVVPGLMHTPLVETRLARTVGGNDLQKLIDA
                     RNAAVPMGHMGDAWDVAHAVLFLASDEAKFITGTEIIVDGGSTAAMP"
     gene            3572..4135
                     /locus_tag="VHX39_11430"
     CDS             3572..4135
                     /locus_tag="VHX39_11430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX3991770.1"
                     /translation="MSERRFPELTPETMTDEQRQVAEAIQAGPRGAGLRGPFNALMRS
                     PQLCDLVQRVGAYVRYGSSIPAPLNELAVCMAGRKWGAQYEFYAHRKLGIDAGLNPAI
                     LDSVANGRRPENMSSDETLVYEFVMSLLGTGQVPDPRYHAVIDRFGERGVMDLVGAVG
                     YYSLVSMVLNVAQVPLPEGVEPPLKAL"
     gene            4196..>5381
                     /locus_tag="VHX39_11435"
     CDS             4196..>5381
                     /locus_tag="VHX39_11435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006557365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3991771.1"
                     /translation="MRPEDVIADKGRPFTGAEYVESLRDGREVYIDGEQVADVTTHPA
                     FRNAIRSIARLYDALHDPKTHEELTCPTDTGSGGYTHRFFRVARSRDDMRGAQQAIAS
                     WARLSYGWMGRTPDYKAAFSNTLGGFPEYYGPYADNARVWYKRAQEAMPFMNHAIVNP
                     PIDRHKPAEAVKDVYACVKKETDAGIYVSGAKVVATSAAFTHYNFMGQSSKTATEDLD
                     LSVMFMVPINAPGLKLFCRTSYEAAVARNASPFDYPLSSRFDENDAIFVMDNVFIPWE
                     DVFIYRDPARVMSFFPGSGFVHGAMFQGCTRYAVKLDFISGLLAKALRCTGGDEARNN
                     QVLLGEVIAWRHLFWALSDAMANNPQPWKGDAVLPELQAGHAYRVFGPDSWPRIKDIV
                     QKT"
BASE COUNT         1005 a         1631 c         1661 g         1084 t
ORIGIN      
        1 cgataccgtc cagtgcgtgc acccccgccg cggtcaacat ggtgagcatg tcgccaaatc
       61 ttccgtgcag cagatgcagg cgatccgggt actgggctgc gagcgcggcg ccgcgggcga
      121 tcgcggtttc gtcacggtcg atcgcccata catggcaatg ggcacgctcg agcatcgccc
      181 tcgtgtagcc accgccgcca aaagtaccgt cgagatatac tgccccatcg cgcggcctca
      241 gcgttgccaa catttctgtc agcattaccg gaatgtgggt tccaatggcc ttgctttcgg
      301 cgacgttgcg cccttcggtc ggtgtcatgc ggtcacctcg cgctggcgtg ccattcgtgc
      361 gcgattggtc gactgggcca atgccttttg cccaggaaca ttgtccgggt tccagagctg
      421 aaaccgcacg cccatgccga caaaagcgac gctcccggtg cgggagatag ccgcatgact
      481 caacaatgtg tcgtggatga tgatgcggcc ttctttgtcg gtctcgatcg gccacgcgtc
      541 ggcgaacaaa accgttgcga gtgcgtcata ttcttcgctg agcggatcaa gcttttccag
      601 ttctgccagc agcgcgtgat gtttcacctc agtcagggcc tcgatgcatt gcgccttctc
      661 agatgggcgt aacacgagcg gtacgctgac cggaccttca ctgttggcgg agatgctcac
      721 ggcaccggcg cgcagcggga tgcgaaatga ggcggggacg gaaaccctgc ccttcgcatc
      781 aaagttctgc acataagtta cgttgaacag agccatcgca gcccggccac ctcccggcat
      841 gggtcgtcac gtcagcgaaa ggcggagact gcgaggcgaa caattcggtc cggtcaggat
      901 gtccgccaaa cgccctggtg caggcccgcc atggattgag ttggaatttt ttggagatcc
      961 atgggcctgc atgggataac atgggtttcc gtctccttac aaggcgatta aagggttcag
     1021 cactaaaaaa atgcgatcgg tggaacgatt ggccccctgg ctcgaacgac ccgctgcttc
     1081 gctgcatcat ttgagtggct ggctgtaaaa aaccgcgtgg attccgcaca agactacgtc
     1141 cggttaattc tgcgagcttc ctgttttgtt ccggaagttt tgctgcgtta cggcagcgtt
     1201 ggggcgtggc cctgcgcggt cacgacagtc atacgccggt cgcgattggg atcgcccttg
     1261 gagtgcctgg ccggcactcg gcctttggca tcgaaagcga gcttgtgatg aggtgccaga
     1321 cggcctgtaa gccgggttct gtccgcacga tacctcggcc aggccgaggc atcgcgcggg
     1381 acgaccattc ctctgggacg cgctttgcag cgcgcctcac gcgaccaacc cgggcagcga
     1441 gacgggaacg tccctgaggt catccggacg agccgaacga tgcctccgct acccctattc
     1501 ggtcttgctc ccggtggggt ttaccctgcc gccgccgtta ccgaaggcgc ggtgcgcttt
     1561 taccgcaccg tttcaccctt gcccgtgaga tattggtcca agggaatgtt ccccggacca
     1621 ggaccgcgcg ggcggtttgt tttctgtggc actatccctg gggtcacccc cgccggccgt
     1681 tagccggcac cgtattcccg tggagcccgg actttcctcc ataccccgaa ttaacggggc
     1741 acagcggccg tccggccgtc tggcggcaaa gacatggggc ttctccgctg gttgcgtcaa
     1801 gccggtcggt ctttgcgcct tcgggagata tcaaagagtg tcgcttaaat ggttccaata
     1861 ttcggtggcc attattcgct ggcggtgcag gtcacagaac gcacctttcg ccggacaggc
     1921 aaagtccacc gatattggct catcaaatga tcgcaacgct ggcatcgcca atttggttgc
     1981 tgacggacca tcgccgagcc gcaggtcggc gccggcgcga ggatgtcgtc ttccttcgcg
     2041 ccgcccgcca ttcgtcagag agcagcgagg attgtctctg ccttactctc ctcgaagcca
     2101 ccgggcgctt caacgccaag atgtgtcact ttgccgtctt cggcaatcag agcgtagcgc
     2161 tggctgcgta cccccatgcc gcgcgccgtg atatccatct ccagaccaat cgccttggcg
     2221 aaattggccg agccgtcagc aagcatcaca agtttgccct cagtgccctg agatttcccc
     2281 caggcgccca tgacgaacgc gtcgttgaca gcgatacagg caatagtgtc gacgcccttg
     2341 gccttgattg cgtccgcgtt ttgcacgaag ccgggcagat gccgcgcact gcaggttggc
     2401 gtgaacgcgc ccggcacggc gaacagcaca actttcttgc ccttgaagat atcatcggtg
     2461 gccacttcct tcgggccgtc cgctgttgcc atcatcagtt tcattgacgg aatcgtatcg
     2521 ccaactttga tcgtcatggt tctctagctc cccgaaaggg gacagacccg ctttgggtgc
     2581 cccggtgata acgggcaact cctcgcacga gttcgaaggc gagtcacgac ccccgcattg
     2641 gtcaccgcct cagtccgcag tttgcgcttt atggggtcct ctggccttcc gcccggacgg
     2701 ctggcatctt cgcgccaccg cgttggagga agctgcgtgc tgagcatgaa aggaaaggtg
     2761 gcgatcgtca ccggtgccgg ctcggtgggg ccgggatggg gcaacggccg ggccacggcg
     2821 accttgctgg cgcggcaggg ggccgaggtg tttctggtcg acgtgaacga ggccgccgta
     2881 cgcgacacga ttgccattat cgagaaggaa ggcggcacgg cccatatgca ttgctgcgac
     2941 atgacggtcg ctgcggacgt tcaggaaatg gtgcaggcct gcgtcacaag gttcaaacgc
     3001 atcgacatcc tggttaacaa cgtcggcggt tcggctcctg gcgatccggt ctcgatgacc
     3061 gaagaggtct gggaccgaca gatcgactca aatctcaaaa ccacattcct tggctgcaaa
     3121 tacgccattc cggtgatgct ggagcaaggc aagggagcga tcgtcaacat tgcctcggtc
     3181 gccgggatgc ggaacgattt cctcagcggc cgttcgcacg tcggctacag cgcgtcgaag
     3241 gcgggggtga tccagttgtc gcgctcggtc gccgggacct atgcgaaaag caacatccgc
     3301 gtgaacaccg tggtgcccgg cctgatgcat acgcccttgg tggaaacaag actggcccgc
     3361 accgtcggcg gcaacgacct gcagaaactg atcgacgccc gtaacgccgc cgtccccatg
     3421 ggacacatgg gcgatgcctg ggacgtggcg catgccgtgc tgttccttgc ctcggatgag
     3481 gcgaagttca ttaccggtac cgaaatcatc gtcgacggtg gcagcactgc ggcgatgccc
     3541 tgatagcgga acgcaataaa aggagatcac gatgtctgag aggcgctttc cggagctgac
     3601 gccggagacg atgaccgatg aacaacgcca ggtcgccgag gcgattcagg cgggcccgcg
     3661 cggcgccgga ttgcgggggc cgttcaacgc cctgatgcgc agcccgcagc tgtgcgatct
     3721 cgtgcagcgt gttggcgcct atgtgcgcta tggcagctcg atcccggcgc cgctgaacga
     3781 actggcggtc tgcatggccg gccgcaaatg gggcgcgcag tacgaatttt acgcccaccg
     3841 taaactgggc atcgacgccg gcctgaaccc agcgatcctc gattcagtgg caaacggacg
     3901 ccgcccggag aacatgtcgt ctgacgaaac cctcgtctac gagttcgtca tgtcgcttct
     3961 gggtaccggc caggtgccgg atccacgcta tcatgcggtg atcgaccggt ttggcgagcg
     4021 tggcgtgatg gatctggtcg gagcggtcgg gtactacagt ctcgtatcga tggtgctgaa
     4081 cgtcgcgcag gtgccgttgc cggagggcgt agagccacca ttgaaggcgc tctgaggttt
     4141 tcttgccggt gcggtgaagc tcggcttcac cgcgtcacac cgagggagac gaaccatgcg
     4201 cccggaagac gtcatcgccg acaaaggccg cccgtttacg ggtgccgaat acgtcgagag
     4261 cctacgggac ggccgtgagg tttacatcga cggtgaacag gtcgccgatg tcaccacgca
     4321 tccggcgttt cgcaatgcca tccgctccat cgcgcgtctc tatgatgctc tgcacgatcc
     4381 caaaacccat gaggagttga cctgcccgac ggacaccggg tcgggcggct atacccacag
     4441 gttctttcgg gtggcgcgat ctcgggacga catgcgtggg gcgcagcagg cgattgcaag
     4501 ttgggcacgg ctttcctacg gctggatggg ccgtacgcct gactacaaag cggcgttctc
     4561 caatactctt ggcggcttcc ccgaatatta cggcccatac gcggacaatg cgcgagtttg
     4621 gtacaagcgt gcgcaggaag cgatgccgtt catgaaccac gccatcgtca atccgccaat
     4681 cgaccgccac aaaccggccg aagccgtaaa agatgtctat gcctgcgtga agaaagaaac
     4741 cgacgcgggg atctacgtct cgggcgcgaa ggtggtcgcc acatcggccg cattcacgca
     4801 ttacaacttc atgggccagt cctcaaaaac cgcgaccgag gacctcgacc tgtcggtcat
     4861 gttcatggtg ccgatcaatg cccctgggct gaagttattt tgccgcacat cgtacgaagc
     4921 cgccgtcgcg cgcaacgctt cgccgttcga ttatccactg tcttcgcggt tcgacgagaa
     4981 cgatgcgatc ttcgtgatgg acaacgtatt catcccctgg gaggacgtgt tcatttaccg
     5041 cgatccggcc cgggtgatga gtttctttcc cggcagcggc ttcgtgcacg gcgcaatgtt
     5101 ccagggctgc acacgctatg ccgttaagct cgatttcatt tccgggctgt tggccaaggc
     5161 tctgcgatgc accggcggcg atgaggcccg gaacaatcag gtgctgcttg gcgaggtgat
     5221 cgcgtggcgg catttgttct gggctttgtc cgacgccatg gcgaataacc cgcagccctg
     5281 gaagggcgac gctgtgttgc cggagttgca ggcgggacat gcttatcggg tgttcgggcc
     5341 agactcctgg ccgcgcatca aggatattgt acagaagact g
//
LOCUS       DATAVD010000612         1676 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_987605, whole genome shotgun sequence.
ACCESSION   DATAVD010000612 DATAVD010000000
VERSION     DATAVD010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1676
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_987605"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1085)
                     /locus_tag="VHX39_11440"
     CDS             complement(<1..1085)
                     /locus_tag="VHX39_11440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEX3991772.1"
                     /translation="MSKRDEDLGADITARTDSYFNRTKEIVARYGDKRVTYALFLRRP
                     VICAPRLMLDWLKTAADRRGTAIDVDLIYQEGDWVGAGEPIVYLTGSLVQLSDLETIL
                     LQKIGPACVAAHNAYQMALSLPAVAFLAMEARHCAGAEMQDMMAYAASVGSAAARREG
                     AKGFIGNANDGTAHWFGASKGFGTMPHSLIGYAGSTVRAAEMFRETYPDEPMTVLVDY
                     FGREVSDALAVCRRFPDVAAAGDMAFRLDTHGGRFLEGLDPAESYAVLERYAPGAIRR
                     YRSDSELRALVGTGVSAAAIWRMREALDEAGYAKVRIVVSSGFGVEKCRVMADAKAPI
                     DVVGTGSFIPDSWHETYATADIVEYDGV"
     gene            complement(1096..>1676)
                     /locus_tag="VHX39_11445"
     CDS             complement(1096..>1676)
                     /locus_tag="VHX39_11445"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEX3991773.1"
                     /translation="RTRQAEGAHVEFLRGLQNPLGMKVGPTQDPDDLLRLLDILNPVN
                     EAGRITLISRMGADKVGSKLTPLVRAVQRSGHKVVWLSDPMHGNTISTSSKVKTRNFD
                     SILQEVRGFFDIHAAEGTWAGGVHVEMTGQDVTECIGGAHRLSEADLGARYETFCDPR
                     LNAEQSLELAFLVAAELKRRRLPPTAPALAAQ"
BASE COUNT          285 a          627 c          465 g          299 t
ORIGIN      
        1 accccgtcat attccacgat atccgccgtg gcgtacgttt catgccacga atccggaatg
       61 aaactacccg tccccaccac atcgatcggc gctttcgcat ccgccatcac ccggcatttt
      121 tccacgccga aaccggacga gacaacaatc cgcaccttcg catacccggc ctcatccagc
      181 gcttcccgca tgcgccatat ggccgccgcg gacaccccgg ttcccaccag cgcacgcaac
      241 tccgaatcac tgcggtaccg ccggatcgcc ccgggtgcgt aacgttccag cacggcatag
      301 ctctccgccg gatccagtcc ctccaggaac cgcccgccat gcgtgtccag ccggaacgcc
      361 atatcccccg ccgccgcgac gtcaggaaac cgccggcaga ccgcaagcgc gtcgctgacc
      421 tcacgtccaa aataatccac cagcaccgtc atcggttcat ccggatacgt ctcgcggaac
      481 atttccgccg cccgcaccgt cgagccggcg tagccgatca gggaatgcgg catcgtcccg
      541 aaacccttcg atgccccgaa ccaatgcgcg gtgccgtcat tggcgttgcc gatgaagccc
      601 ttcgcccctt ctcgcctggc cgccgcactg ccgacggatg cggcataggc catcatgtcc
      661 tgcatttcgg ccccggcgca gtgcctggcc tccatcgcca ggaaggctac cgcgggcaac
      721 gacagcgcca tctgatacgc gttgtgcgcg gcgacgcagg ccgggcctat cttctgcaac
      781 aagatcgttt ccaggtcgga gagctgcacc aggctgccgg tcaggtagac gatcggttcg
      841 ccggcgccga cccaatcgcc ttcctggtag atcagatcga cgtcgatcgc cgtgccacgc
      901 cggtcggccg ctgtcttcag ccagtccagc atcagccgag gcgcgcagat caccggccgc
      961 cgcaggaaca gcgcataggt cacccgcttg tcgccgtagc gggcgacaat ctccttcgtg
     1021 cggttgaagt agctgtcggt cctggccgtt atgtcggccc cgagatcctc gtcccgcttg
     1081 ctcatgtccg tcagctcatt gtgcggccag cgccggtgcc gtcggcggca ggcggcggcg
     1141 cttcagttcc gctgccacca ggaaggccag ttccagcgac tgttccgcgt tcagccgagg
     1201 atcgcagaac gtctcatacc tggcccccag atcagcctcg gacagccggt gagccccgcc
     1261 aatgcattcc gtcacgtcct ggcccgtcat ctcgacatgc accccgcccg cccaggtgcc
     1321 ctccgccgca tggatgtcga agaagccccg cacttcctgc aggatggaat cgaaattccg
     1381 cgtcttcacc ttggacgatg tgctgatcgt gttgccgtgc atcggatcgg acagccacac
     1441 gaccttgtgg ccggaccgtt gcaccgcgcg caccagcggg gtcagcttcg accccacttt
     1501 gtccgcgccc atgcggctga tcagggtgat ccggccggct tcgttcaccg ggttcaggat
     1561 atccagcagc cgcagcaggt cgtctggatc ctgtgtcggc ccgaccttca tccccagcgg
     1621 attttgcagg ccgcgcagga attccacatg cgcgccctcc gcttgccgcg tccggt
//
LOCUS       DATAVD010000613         3456 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1547618, whole genome shotgun sequence.
ACCESSION   DATAVD010000613 DATAVD010000000
VERSION     DATAVD010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3456
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1547618"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            229..1533
                     /locus_tag="VHX39_11450"
     CDS             229..1533
                     /locus_tag="VHX39_11450"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3991774.1"
                     /translation="MSDTVANDFAGLTASQLAVVRRRAILSCAIGNFFELFDFTIYGY
                     FAVAITRAFYPSGSMYGTYATFGAAFLMRPVGAIVIGAYGDRMGRRAALVITIGIMAG
                     ATGAVGLIPTYNAIGYWAPVLLVLCRLAQGFSTGGEWGGAAAFLVEYAPPKKRGLTGS
                     WQQFSTQIGALTGSLSAALLASSLSNEDFYAWGWRVPFLFGFLLGPIGYYLRKKVAET
                     PAFERAVETRTVERAPLRVAVQEYGVRMVQAFGLSIIGCIAGFVFTVYLVSYSINSLH
                     LPPGVALSCAVAYGIVVVTLTPLVGAFTDRVGRRPLILASALLNLVFDYPLFLLAIRG
                     GTFASLLSAMVCVGVFQALYTGTIPSILAEMFPTRVRYTALSVSYGFAVVLFGGFAPL
                     ISTWLVDVTGNPYAPAFYVMTGGALSAIAILSMKEYRNTPLD"
     gene            complement(1549..2484)
                     /gene="hcaB"
                     /locus_tag="VHX39_11455"
     CDS             complement(1549..2484)
                     /gene="hcaB"
                     /locus_tag="VHX39_11455"
                     /EC_number="1.3.1.87"
                     /inference="COORDINATES: protein motif:HMM:NF004849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-(cis-5,6-dihydroxycyclohexa-1,
                     3-dien-1-yl)propanoate dehydrogenase"
                     /protein_id="HEX3991775.1"
                     /translation="MAHRPGVKVLWRIVGSLLHWISGEPPDACAPAMRYRQTRALWRT
                     GIVGSLDGQVALVTGGGSGIGLAVVARYIEEGARVGIMERATDRTEALQARFGAAVVA
                     IAGDAGELADNQRAVAATVNAFGKLDVFVGNAGIFDVYARLADLPEDELTRAYNELFR
                     VNVGGCIFGARAAVSELRKTGGSMIFTASVAGLNSGGGGALYTASKHAVVGLIRELAV
                     ELAPDVRVNGVAPGGTMTDLRGLAALGNDDRSQFADPAIAERLRGGNPLRLALEPEDL
                     AGAYVFLASRRDARGITGGILTVDAGGLLRMPRSR"
     gene            2545..>3456
                     /locus_tag="VHX39_11460"
     CDS             2545..>3456
                     /locus_tag="VHX39_11460"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX3991776.1"
                     /translation="MVERAPFLTEAYSAYHHRAMPEDDTEMTRVGPDTPGGEYLRRFW
                     QPVILASELGDLPKRIRILGEDLVAFKDKSGAIGVMELHCPHRGTSLEYGLIDNKGIR
                     CCYHGWLFDVDGTILETPGEPADSTLKDRLCHGAYPVHEYAGLVFAYMGPPEQKPPFP
                     IFDTYDLPGYQLVARAPTLWDCNWLQVKENSMDPAHVAFLHTLPGSEGFSEDFKELAE
                     WDWMETPVGMVYIDTRRYEDKVWVRVADFILPNIHQFPPNMDPVALRNAINRPQATTW
                     AVPLDDTHTMQIGYYRAPEGKDPNRDTV"
BASE COUNT          643 a         1105 c         1039 g          669 t
ORIGIN      
        1 cgggcatcat ccagcgcgcc acgtcgctgc cgggccaggt gctgcgccag gtttttgggc
       61 cgtagccttg tgacaggaac caggccaggt ggaatggtcg tttcgccatg ccaggaagtg
      121 tgccagttgt gcagcgcagc gtaaactggc ttttgcccgc gagccacttg accgtggcat
      181 gcgctgtgca cgccgatgac caaagcgaca tcacaacagg agcgcgttgt gtccgacacc
      241 gttgcgaatg actttgccgg cctgaccgcg agccagcttg ccgtggtgcg gcggcgtgcc
      301 atcctgtcct gcgcgatcgg caatttcttc gagctgttcg acttcaccat ctatggctac
      361 ttcgctgtgg ccatcacaag ggcgttttac ccgtcgggtt cgatgtacgg cacttatgcc
      421 acgttcggag cggcattcct gatgcgtccg gtcggtgcca tcgtgatcgg cgcctatggc
      481 gaccgcatgg gccggcgcgc tgcgctcgtc ataacgatcg ggataatggc tggtgccacc
      541 ggcgccgttg ggctcattcc aacctacaac gccatcgggt actgggctcc agtgctgctg
      601 gtgctgtgcc gcctggcaca aggtttttcg accggcggcg agtggggcgg cgcggcggcg
      661 ttcctggtgg aatatgcacc tccgaaaaag cgcggcctga ccggaagttg gcaacagttc
      721 agcacgcaga ttggcgcgct gaccggttca ctgtccgccg cgctgctggc ctccagcctg
      781 agcaacgaag acttctatgc ctggggttgg cgcgtcccgt tcctctttgg ctttttgttg
      841 ggcccaattg gctattatct gcgcaagaag gtggcagaga ctccggcctt cgaacgcgcc
      901 gtcgagacca ggacggtcga acgggcgccg ctgcgcgtgg cggtgcagga atatggcgtc
      961 cggatggtcc aggcctttgg cctgagcatc atcggctgca ttgccggctt tgtgttcacc
     1021 gtttacctcg tgtcgtacag catcaactcg ttgcatttgc cgcccggcgt ggcgctgtcc
     1081 tgcgctgtcg cttatgggat cgttgtggtt acgctgactc cgctggtcgg cgccttcacc
     1141 gatcgggtcg gccgccggcc attgatcctg gcttctgctt tgctcaacct cgtgttcgac
     1201 tacccgctgt ttctgctggc catccgcggc ggcacgtttg catccttgtt gtcggcgatg
     1261 gtttgcgtgg gagtgttcca ggcgctctat accggcacaa tcccatccat tctggcggag
     1321 atgtttccaa cccgcgtgcg ctacactgca ctttcggtca gctatggttt tgcggtcgtc
     1381 ctgtttggcg gcttcgcgcc gctgatttca acgtggctcg tcgacgtgac cggcaatcca
     1441 tacgctccgg cgttctacgt gatgacgggg ggcgcattga gcgccatcgc gattttaagc
     1501 atgaaagagt atcgcaacac gccgctggac tgatgtgacc gcccaggttc agcgagagcg
     1561 cggcatacgc aacaagccac cggcatcgac cgtcagaata ccacctgtga tgccacgggc
     1621 gtcgcgccgt gaggcgagaa acacataggc gccggcaaga tcctcgggtt ccagtgcaag
     1681 gcgaagcgga ttgccgccgc gcaaccgttc tgcaatggcc ggatcggcaa attgtgagcg
     1741 gtcgtcattg cccaatgcgg cgaggccgcg cagatcggtc atcgtaccac cgggtgccac
     1801 gccattgacc cggacatccg gcgccagctc cactgccagt tcccggatca ggccaacgac
     1861 cgcgtgtttc gaggcggtat aaagcgcgcc gccaccgccc gaattcaggc cggcgactga
     1921 cgcggtgaaa atcatcgagc cgccggtctt gcgcagttcc gacaccgccg cccgtgcacc
     1981 gaagatgcag ccacccacat tgacccggaa cagctcgttg taagcccgcg tgagttcgtc
     2041 ctcggggaga tcggccagcc ttgcatatac gtcgaaaatt ccagcgttgc cgacaaacac
     2101 gtcgagcttg ccgaatgcat tcacggttgc ggcaaccgcg cgctggttat cggcgagctc
     2161 accggcatcg cccgcgatcg caacgactgc ggcaccaaat cgcgcctgca acgcctccgt
     2221 tcgatcggtc gcacgctcca tgatgccgac gcgcgcgcct tcctcgatat aacgggcgac
     2281 cactgccagg ccgatgcccg agccaccgcc ggtaaccaac gcaacctgac cgtcgagact
     2341 gcccacgata cctgtcctcc acaaagcccg cgtctgacgg tagcgcattg cgggggcaca
     2401 cgcatccggt ggctcgccgg aaatccaatg cagcagcgag ccgacaattc gccacagcac
     2461 cttgacccca ggccgatgcg ccatccacta tccaaaacaa gcaatggccc gggaggcggc
     2521 gaccgcaacg tatggaggcc catcatggtc gaaagagcac cgtttttgac tgaagcctac
     2581 agcgcctatc accatcgtgc gatgccggag gacgacacgg aaatgacccg tgtcggacca
     2641 gacaccccgg gcggagaata tctgcggcgc ttctggcaac cggtcatcct tgccagcgaa
     2701 ctcggcgacc tgcccaaacg catccggatc ctcggcgaag atctcgtcgc gtttaaagac
     2761 aaaagcggtg ccatcggcgt gatggagctg cattgcccac atcgcggcac gtcgcttgag
     2821 tacggcctga tcgacaacaa aggcattcgc tgctgctatc acggctggct gttcgacgta
     2881 gacggcacga tcctggaaac gcccggcgag cccgccgaca gcacgctaaa agatcggctg
     2941 tgtcacggcg cctatccggt gcacgagtac gccggcctgg tgttcgctta tatgggaccg
     3001 ccggaacaga agccgccatt ccccatcttc gacacgtatg acctgcccgg ctaccaactg
     3061 gtggcccgcg cgccgacgct atgggactgc aattggttgc aggtcaaaga gaacagcatg
     3121 gatccggctc acgtcgcgtt cctgcacacg ttgccgggca gcgagggctt ctctgaagac
     3181 ttcaaggaac tcgctgagtg ggactggatg gaaacgccgg tcggcatggt ctatatcgac
     3241 acaagacgct atgaagataa ggtctgggtg cgggtcgccg atttcatcct accgaacatt
     3301 caccagttcc cgcccaacat ggatcccgtc gccctccgca acgccataaa ccgtccgcag
     3361 gccacgacct gggcggtacc gctggacgat acgcacacga tgcaaattgg ctattaccgc
     3421 gcgcccgagg gcaaggaccc gaatcgcgac acagtg
//
LOCUS       DATAVD010000614         1537 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2849523, whole genome shotgun sequence.
ACCESSION   DATAVD010000614 DATAVD010000000
VERSION     DATAVD010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2849523"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..315
                     /locus_tag="VHX39_11465"
     CDS             <1..315
                     /locus_tag="VHX39_11465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEX3991777.1"
                     /translation="NADAYFIEYDSDRAGGFEPLRFVPRGPKIVVLGLITSKTGALES
                     KDELKRRIDEATKYLPLEQLALSPQCGFASTEEGNTLTEDEQWAKLRLCVDVAREVWG
                     GV"
     gene            complement(373..1461)
                     /locus_tag="VHX39_11470"
     CDS             complement(373..1461)
                     /locus_tag="VHX39_11470"
                     /inference="COORDINATES: protein motif:HMM:NF042789.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HEX3991778.1"
                     /translation="MRSWIQHTRGRHVRQARVGLGDLREEHISRQGFFGPVAMIYREH
                     GPNEVVRVEGSLLPRRVADTTRVEPSDQVDPRGMPEVMLSNGDVSVAVSRRTAAMPYA
                     YRNLDGDLLYFVHQGTGIFATEFGRLAYEPGDYVLIPKAITFSVMPEPGDSHMLVVES
                     PAALELTEHKQTGRHMPVDPTVLVLPELCDYGFLRADEYELRVKHGGDHSSIFYRNNP
                     LVSVGWKGDLFPFKLNIRDIIPISSDRIHIAPSAWCTFQASGFAVISFVPQIAVADPN
                     AEELPSYHRNVDNDESVFVHHDAGSARQPATLSHVPQGILHGADEATRAAFNARRVPG
                     MRRTLCGVSVDTDRPLIASPAFQRVSGG"
BASE COUNT          307 a          495 c          470 g          265 t
ORIGIN      
        1 aacgcggacg cctacttcat agaatatgat tccgaccggg ccggcggctt tgagccgctg
       61 cgcttcgtgc cgcgcggtcc gaaaatcgtg gttctcggcc tgatcaccag caaaaccggc
      121 gcgctcgagt ccaaggacga actgaaacgc cggatcgatg aggccacgaa atatctgccg
      181 ctggagcaac tggcgctgtc accacaatgc ggcttcgcct cgaccgagga aggcaatacg
      241 ctgaccgagg acgaacaatg ggcgaaactg cgcctgtgcg ttgacgtcgc gcgcgaggtg
      301 tggggcgggg tgtgacggcc agggtggaaa aggcgtcagg gctccacccc gacgctttcc
      361 aaacccctgc cctcatccgc cgctcacccg ttgaaatgcc ggcgaggcaa tcagcggccg
      421 gtcggtatcc acgctgacgc cgcacagcgt ccgccgcatg ccgggcacgc gccgagcgtt
      481 gaacgccgcg cgagtggctt cgtcggcgcc gtgcaggatg ccctgcggca catgcgacaa
      541 cgtggccggt tggcgggcac ttccggcatc gtgatgcacg aacacgcttt cgtcattgtc
      601 gacgttgcga tgatacgacg gcaattcctc ggcgttcggg tcggccaccg caatttgcgg
      661 cacgaacgat atgaccgcga aaccagatgc ctggaacgtg caccacgctg acggcgcgat
      721 gtggatgcgg tcggaactga tcgggatgat gtcacggatg ttcagcttga agggaaacag
      781 atcgcccttc cagccaaccg acaccagcgg attattccga tagaagatcg agctgtgatc
      841 gccgccatgc ttcacccgca gctcgtactc atcggcgcgt agaaacccgt agtcgcacag
      901 ctccggcagc accagcaccg tgggatcgac cggcatgtgc cggccggttt gtttgtgttc
      961 ggtcaactcc agcgccgccg gcgactcaac caccagcata tggctgtcgc ccggctcggg
     1021 catcacactg aaggtgatgg ctttcgggat cagcacatag tcgccaggtt cgtaggccag
     1081 ccggccgaac tcggtggcaa agatgccagt gccctgatgc acgaaataca gcagatcgcc
     1141 atccagattg cgatacgcgt agggcatcgc cgcagtgcgc cggctgaccg cgacactgac
     1201 atcgccattg gacaacatca cctccggcat accgcgcggg tcgacctgat cggacggttc
     1261 cacccgcgtc gtgtcggcta cccggcgcgg caacaacgag ccctcgacac ggacaacctc
     1321 attcggtccg tgttcgcgat agatcatcgc caccggtccg aagaagcctt gccggctgat
     1381 atgttcctcg cgcagatcgc cgaggccgac gcgcgcctga cggacatgcc gtccgcgcgt
     1441 atgttggatc catgatcgca tcacgccgca ctccctgggt tgttgagatt acgtcgaacg
     1501 aacgccaaaa tccgggctga gaccgctgcc ctgaatg
//
LOCUS       DATAVD010000615         1718 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_805944, whole genome shotgun sequence.
ACCESSION   DATAVD010000615 DATAVD010000000
VERSION     DATAVD010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_805944"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(285..674)
                     /locus_tag="VHX39_11475"
     CDS             complement(285..674)
                     /locus_tag="VHX39_11475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991779.1"
                     /translation="MDGYGYYGNEGPCCGSCGGGGCSSCGGGMAGGSNGPGGYAGQGQ
                     RVPVYNGPAQGGAVYSGQAQGGPYPPRAAARRRPAAGHPLVRQRRDADGEYEFAAGPP
                     SGSTTYPYYTTRGPRDFLARNPRDIGP"
     gene            1319..>1718
                     /locus_tag="VHX39_11480"
     CDS             1319..>1718
                     /locus_tag="VHX39_11480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991780.1"
                     /translation="MDNFLRAVRLALHYHWTVAASFVCAVIVALLWSANISLLYPLVE
                     VVGMNETMQQRVDAKIAESSEAIVKHAAEQVRLKGQLARASAEDAARLQRQLTAAITG
                     REAAEESLQRFRWAKPWVDDYLPNDPFHTLV"
BASE COUNT          341 a          563 c          520 g          294 t
ORIGIN      
        1 ctcctcggaa gcaagccagg tcggggaaac gcaggacgcg ggccagggaa attgctaccc
       61 cgcccgccgc aggatgggtt ggagtctggc cagccagcgt ctcctccagc cataagaaat
      121 agcgaactgg tggaaaagtg caaggctgaa acaagccgtc gccacgggcc ccagctcacc
      181 tgccgcaggc gtcagcaata aaaagggacc agccgcgtgc atgcgctttt tgcatgactt
      241 gcggctggcc cacgggatcc gttggtcgac gaaccaggag cggcttacgg gccgatgtct
      301 cgcggattgc gggccaggaa gtcgcgcgga ccgcgagtgg tgtagtaagg ataggtggtc
      361 gagccgctcg gcggaccagc ggcgaattcg tactcgccgt cggcgtcgcg acgctgacgc
      421 accagcggat gtccggctgc cggacgacgt cgagcggcag cccgcggcgg atacggaccg
      481 ccctgagcct ggccgctata gaccgcgccg ccctgggccg gtccgttgta aaccggcacg
      541 cgttggcctt gaccggcata gccgccgggg ccgttcgatc cgccggccat gccaccaccg
      601 caactgctgc aaccgccgcc gccgcacgag ccacagcacg gaccttcgtt gccgtaatag
      661 ccgtagccat ccatgccgcc accgccgcaa cctccacagc ctccgccaca gcctccgccg
      721 ttgcagcccc agcagaataa tttttcgaag caacagcagc cggagctact ggccacgaat
      781 gtcacggcca cgatggccaa aagagcgcgt ctcatattcg cttgatttcc tttctcgctt
      841 gtgggctctg tagcctgctc gcgtcagtgc ggcagttatc cctaagctcg aagccccccc
      901 cgaaatgacg ctcactatcc gccgagcacc gccagacttg gtgcctggca gccttcccca
      961 ggcggatagc ctacctacac aggactatcg gcggcgcaat cgtcaaagtt cagcaattcg
     1021 ttatcttgag aatgcacggc agtctttacc accagcggag agggcgacct caaactccgc
     1081 acgctagcag agggtgtagg tgcctgatca atcgccgggc accagaagca tgttgaaaag
     1141 atttggcgcc ccgcgcccgt ggtcggtgtc ccccaccggg cagccgacgg tattcgccgc
     1201 ccttggccgg gtcagggcaa tctggtaaaa aagcccggct tacgcatgcc tttaagcccg
     1261 gcggtggaat ccggccggag cgattgacca gatttctcgc gctgaaagct cttcaaggat
     1321 ggacaacttc ttgcgcgccg tgcggttggc gctccattat cactggaccg tggccgcatc
     1381 gtttgtctgc gccgtcattg tcgctctgct ctggagcgcc aacatcagcc tgctctaccc
     1441 cctggtggaa gtggtaggca tgaacgagac catgcagcaa agggtcgacg ctaaaattgc
     1501 cgagtccagc gaggcgattg tcaaacacgc cgccgagcag gttcgactga aagggcaatt
     1561 ggcacgtgca tccgccgaag acgccgcgcg gctccaacgg caactgaccg cggcgatcac
     1621 gggtcgcgag gcggccgaag agagcctgca gcgctttcgt tgggccaaac cttgggtcga
     1681 cgactacttg cccaacgatc cctttcacac gctggtga
//
LOCUS       DATAVD010000616         1940 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_243763, whole genome shotgun sequence.
ACCESSION   DATAVD010000616 DATAVD010000000
VERSION     DATAVD010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1940
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_243763"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..916
                     /locus_tag="VHX39_11485"
     CDS             <1..916
                     /locus_tag="VHX39_11485"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3991781.1"
                     /translation="WETSMDRMDAISLFVRVVDGGSFSAVARTLGVGQPAVSKQIAAL
                     EAHLGAQLLQRTSRSLTLTEAGRDFYESGIRLLGDFEAAVSRVGRGRIAPSGLVRATV
                     APVFGRLCVVPRLHEFFVRFPEVAVELVVADRLMNLVEEGIDLGVHNGELSDSSLIAR
                     KIAQTPVVTVATPTYLKAHGEPAIPAELERHSCIIYAPQGAVRIWGFHGRFGPVTHQP
                     KGAFRTNDAEQIRAAVLADLGIAHTPGWLFASEIASGAVRPVLKDYEPARLSISAVRP
                     GGRFLASKVRVFIDFLAEMFAADPNLAL"
     gene            complement(936..>1940)
                     /locus_tag="VHX39_11490"
     CDS             complement(936..>1940)
                     /locus_tag="VHX39_11490"
                     /inference="COORDINATES: protein motif:HMM:NF015214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase C-terminal
                     domain-containing protein"
                     /protein_id="HEX3991782.1"
                     /translation="ERNALRVVKETPDGLFITGKVGMFTSPAYAEDVYIGANSSCEYN
                     GHRVTCIVPINSPGVTVLCRKISVRDSNPFVSALSARNDELDGQMWLDNVFVPHDRLF
                     LLDANVDPIARWLFWHQLYCWLSKGDFALGLGLALTDAMGLVQQPPTIEMLLDMITDV
                     QTVRTCITAAELDPSFTAEGYCYPNHVHISVGSIAMLNARQRLTETLRILPGSSMIVA
                     PTDGDLASPDVGPGLEESFAGGGYSALQRAALLQMAWDHVGSSLDARESVYELHSNGG
                     IPVWRARLRRSFTRYNELANAVLREIKLAMPPVDLSSIPAAPVAPRRVASPGNSAARN
                     "
BASE COUNT          377 a          620 c          583 g          360 t
ORIGIN      
        1 atgggagaca tcgatggacc ggatggacgc catcagcctg tttgtccggg tcgttgacgg
       61 cggcagcttc tctgctgtcg cccgtacgct cggcgttggc cagccggcgg tcagcaagca
      121 gatagcagcg ctcgaagcgc atctcggcgc acagttgttg cagcgcacct cgcgcagcct
      181 gaccctcacg gaggcaggcc gcgactttta cgagtccggc atccgtctac tgggcgattt
      241 cgaagcggcc gtgtcacggg tcgggcgggg ccgcatcgcg ccctcgggcc tggtacgagc
      301 gacggtcgcg ccggtcttcg gccggctctg cgtcgtgccg cgattgcacg agtttttcgt
      361 gcggtttcct gaagtcgcgg tcgaactggt ggtcgccgat cgcctgatga acctggtgga
      421 ggagggcatc gatctcggcg tacataacgg cgaactgtca gactccagcc tgattgcccg
      481 caagatcgcg caaacgccgg tcgttaccgt ggccaccccc acctacctca aggctcatgg
      541 cgaacccgca ataccggcgg agctcgaacg gcattcctgt atcatctacg ctccgcaagg
      601 cgcggtgcgc atctggggat ttcatggccg cttcggcccg gtcacccatc agccgaaggg
      661 ggccttccgc accaacgatg ccgagcagat acgagccgcg gtgctggcag accttggtat
      721 cgcccacaca ccgggctggc tcttcgcgtc agaaattgcc tccggcgcgg tgcggccggt
      781 gcttaaggat tacgagcccg ccaggctctc gatcagcgcc gtccggccgg gcggccggtt
      841 cctggccagc aaggtcaggg tgttcatcga cttcttggcc gagatgttcg ccgcggaccc
      901 gaacctcgcc ctataaggtc ccgcctttcg gcagttcagt tcctggccgc agaattccct
      961 ggcgacgcta cccgccgggg cgccaccggc gctgccggga ttgaactcaa atccacaggt
     1021 ggcatcgcaa gcttgatttc cctgagtacc gcgttggcaa gttcgttgta gcgggtaaaa
     1081 cttcgtcgca gtcgcgcgcg ccagaccggg atgccgccgt tcgaatgcag ctcgtacaca
     1141 gattctcgcg cgtccaacga cgaacccaca tgatcccacg ccatctgcaa cagcgccgct
     1201 cgttgcagcg ccgaatagcc gccgccggca aacgactcct ccagtccagg accgacgtca
     1261 ggcgaggcaa ggtcgccgtc cgtcggtgca acgatcatcg acgagcctgg taaaatccgt
     1321 agcgtctcgg tcagccgttg gcgcgcattc aacatcgcaa tgctgccaac cgagatgtgc
     1381 acgtggttgg gataacaata accttccgcc gtaaaactcg gatccagttc ggccgccgtg
     1441 atgcaggtgc gcaccgtctg cacgtcggta atcatatcga gcaacatctc gatcgtcggt
     1501 ggctgttgca ccaaccccat cgcatcggtc agcgcgagac cgagacccag agcgaagtcg
     1561 cccttggaca gccagcaata caactgatgc cagaacagcc accgagcaat cggatcgaca
     1621 ttggcgtcca gcaagaacaa ccggtcgtgc ggaacgaata cgttgtcgag ccacatttgc
     1681 ccgtcaagtt cgtcattgcg tgccgacaaa gcggaaacga aagggttgga gtcgcgcacg
     1741 gagattttcc ggcacaacac ggttacgcca ggcgaattaa tgggaacgat gcacgtaact
     1801 cggtgaccat tgtattcaca actggagttg gcaccgatat agacatcctc ggcataagcc
     1861 ggactggtga acattccgac cttgccggtg atgaacaggc cgtccggcgt ttccttgacg
     1921 acacgcaagg cgttgcgctc
//
LOCUS       DATAVD010000617         3532 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3595709, whole genome shotgun sequence.
ACCESSION   DATAVD010000617 DATAVD010000000
VERSION     DATAVD010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3532
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3595709"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..598)
                     /locus_tag="VHX39_11495"
     CDS             complement(<1..598)
                     /locus_tag="VHX39_11495"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3991783.1"
                     /translation="MDLSLTPSQILIRDSARAFVRRHVPKSELVRQAKDGETWDPAWF
                     AHFRDAGWTGALVPTEFGGLDLDPLSVALIFEELGRGAVPGPLIGSSVIATGLLRGCE
                     PTEQRDAALTAIADGAMILIPALRQPDTSWQGVAATATPLTDRNGAWVLTGSKVFVPF
                     ADAATHFLVSIATPGDALSALAIVPAGAAGITMRLLPGF"
     gene            complement(602..1879)
                     /locus_tag="VHX39_11500"
     CDS             complement(602..1879)
                     /locus_tag="VHX39_11500"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3991784.1"
                     /translation="MEFELRYTSAQEQFRAEVRTWLAENVPHGITARPRSFEESRAIY
                     LLRRELGRKLGAKGWLYPSGEKQYGGGGLDLDQIIVLEEETARLGLGLPPYYDSGGKM
                     GSASIRVWGTAEQKQRFLPPIYRGEVRSWQLLTEPSAGSDLAGVKTTALRDGDVYVVN
                     GQKIYIGSHHGADRYWTIAVTDPKGKRHQNVSWFMIDASLPGITTQPLYMLSAQSEGE
                     TDEHGHKNIIFFDNVRVPADCLVGGENNGWKVASTHLEVEHSGQGNIRTNPVWTALLA
                     HCRKQHRDGRPLIENPDIRTKLAEIFSRLEAVRLLSTRNFWMVYAGEKRSYEGSQVSY
                     LRKTTNLWLTKAILDLLGPAALTNDPVLGAMDGMAEAQQRRGIVEQHPGGTTDIQRVV
                     IARRLGVGAREPQQAGRLGEEGMARKTAQPVEA"
     gene            2300..2986
                     /locus_tag="VHX39_11505"
     CDS             2300..2986
                     /locus_tag="VHX39_11505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991785.1"
                     /translation="MAGLRTPRTVMVAGGDQIIPAAQRHFRGDAVILKPNRGGKGLGV
                     QLFHTLEALKQHVESDGYVEPVDGIQLLQAYVRAPRPVITRAEFTGRRFTYAVEVDTS
                     DGFELCPADACVIDELACPVGEQPFQPAHKFTVVHNIDRSLIGRLEDLLEQVGVDVAG
                     IEFITDANGHPLVYDVNTNTNYNPDAETRARIAGTRRSGMGALAAYLGVGGPRPNPAP
                     PNSRVIRASR"
     gene            3071..>3532
                     /locus_tag="VHX39_11510"
     CDS             3071..>3532
                     /locus_tag="VHX39_11510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HEX3991786.1"
                     /translation="MSTTFEHIRVNPDPDDPRLTETQVGTDHTGARIETKVPVERPLT
                     LFLNGQEIVTAMTIGDYPKELAVGFFLNQGMLRPDDVITGIDYDEELSVAVVRTERKT
                     NYEEKLKKKTQTSGCAQGTAFGDLMDVIEGIRLPEAELRTSWLYRLTHTINT"
BASE COUNT          665 a         1136 c         1074 g          657 t
ORIGIN      
        1 ggaacccagg cagtaaccgc atcgtaatcc cggcggcgcc ggccggaacg atcgccagcg
       61 cggataacgc atcgccggga gtggcgatgc tgacgaggaa atgggtcgcg gcatccgcga
      121 acggcacgaa cactttggac cccgtcagaa cccacgcccc gttgcggtcc gtaagcggcg
      181 tggcggtcgc agcgacgcct tgccacgaag tgtcaggctg ccgcaacgcc ggtatcagaa
      241 tcatggcgcc atcggcgatc gcggtcagtg cggcgtcacg ctgctcggtc ggctcgcaac
      301 cgcgcagcag accggtggca atcacgctcg acccgatcaa cgggcctggc accgcgcccc
      361 ggcccagttc ctcgaagatc agcgcgacgc tgagcgggtc gaggtccagc ccgccaaact
      421 ctgtcggcac cagcgcgccg gtccaaccgg cgtcccggaa atgtgcgaac caggcggggt
      481 cccaggtttc accgtccttg gcctgacgca caagttcgct cttcgggacg tgtcgcctga
      541 cgaaggcacg cgcgctgtca cgaatcaaga tttgtgacgg ggtcagagag aggtccacgt
      601 ctcaggcctc caccggttgc gccgtcttgc gtgccatacc ttcctcgccc agacgtccgg
      661 cctgctgggg ttctcgggca ccgacgccaa gcctgcgggc aatgacaacg cgctggatat
      721 cagtcgtgcc accgggatgc tgctcgacga tgcctcgccg ctgctgtgct tctgccatgc
      781 cgtccatcgc gcccaggacc ggatcattgg tgagtgcagc gggacccaga aggtcgagaa
      841 tggccttggt caaccagagg ttcgtggtct tccggaggta ggacacctgc gatccctcat
      901 aggaccgttt ctcgccagcg tagaccatcc agaaattacg cgttgacagc agccgcaccg
      961 cttccagacg actgaagatc tcggcgagtt tggtccggat gtccggattt tcgatcaacg
     1021 gcctgccgtc ccggtgctgc tttcggcaat gcgccagcaa agcggtccaa accgggttgg
     1081 tccggatgtt gccctggccg ctgtgttcca cctccagatg agtcgaggcg actttccatc
     1141 cgttgttctc gccgccgacg aggcaatcgg cgggcaccct gacgttgtca aagaagatga
     1201 tgttcttgtg gccatgctcg tcggtttcgc cctcgctctg ggcgctgagc atatagagtg
     1261 gctgcgtggt gatacccggc agcgaggcat cgatcatgaa ccaggacaca ttctggtgac
     1321 gcttgccctt gggatcggtg acggcaatgg tccagtaacg gtcggcacca tggtgcgacc
     1381 cgatataaat cttctggcca ttcacgacgt acacgtcgcc gtcgcggagc gctgtggttt
     1441 tgaccccggc cagatcggac ccggcggaag gctccgtcag taactgccag ctacggacct
     1501 cgcctcggta gatcggaggc aaaaagcgct gcttctgttc tgcggtgccc cacacgcgga
     1561 tgctggcact ccccatcttg ccgccgctgt cataataggg cggcaggcca aggccgaggc
     1621 gcgcggtttc ttcctccagc acaataatct gatccagatc gagccccccg ccgccgtatt
     1681 gcttttcgcc cgacgggtag agccaacctt tggcgccaag ctttcggccg agctcgcgac
     1741 gaagcagata aatcgcgcgt gattcctcga aacttcgggg gcgagcggtt atgccgtgcg
     1801 gcacgttctc ggcaagccag gtccgaacct ctgcgcggaa ttgttcttgc gcgctggtgt
     1861 acctaagctc gaattccatg atcgcttccc ttttgtggcc gtcctctggc caggcggacc
     1921 tgatcgttca gcgtcctcgg agttgagtca accatcgacg acgaggcagc cgcaaatgcg
     1981 tggacatctt gtctaaaggg cttccaaaac ccgtgcgttc caccgtgcgc cgcccttgac
     2041 cgatgcgctg aacgcagaag gtctaccgta gacggaatgg ttcatgcaca acggagtttt
     2101 cgacctcagc gcgccgcctc ccacgggcgt gttttacaat cgaatgagcg cctcatcgca
     2161 cacgcgcggc catcgatttt ctgcagaact cacggcctgg gtgctcgcct gactgacacg
     2221 ctgggggcgc atcgtcgtca atgggccggc cgcgttcgat ctggaaatca gcaaggttcg
     2281 ccagtacgcg gcgttggacg tggcaggcct ccgcacgcct cgaacggtca tggtcgccgg
     2341 cggcgatcag attatccccg ctgcgcaaag gcatttccgc ggcgacgcgg tgattttgaa
     2401 gcccaatcgt ggcggcaagg gtctcggcgt tcaattgttt catacgctgg aagccctgaa
     2461 gcagcatgtc gagagcgacg gctacgtcga gccggtcgat ggcattcagt tgcttcaggc
     2521 ttatgtccgg gcgcctcgcc cggtgatcac ccgagcggaa ttcaccggcc gacgcttcac
     2581 ctacgccgtc gaggtcgata ccagtgacgg gttcgaactt tgcccggccg acgcctgtgt
     2641 catcgacgag ctggcttgcc cggtgggaga gcaaccattc cagccagcgc acaagttcac
     2701 ggtcgtgcac aacattgacc gcagcctgat cggacggctg gaggatttgc tggagcaggt
     2761 cggggtggat gtggccggga tcgagttcat tacagacgcg aacggccacc cgctggtgta
     2821 cgatgtgaac accaacacca actacaaccc tgatgcggaa acccgagcga ggatcgccgg
     2881 cacccgacgc tcggggatgg gggcgctcgc ggcctatctt ggcgttggcg ggcccagacc
     2941 caatcccgcg ccgcctaatt cccgggtgat ccgagcttca cgctaagctt ggcttccgac
     3001 ccggaaatcc ctcgcctggg ctgatgcccc agcgttcgcc atttcccgtg acaggcgcta
     3061 tgctgccgcc atgtccacca cctttgagca catccgcgtc aaccccgacc cggacgaccc
     3121 ccgcctgact gagacccagg tcggcacaga ccacaccggc gcccggatcg agaccaaggt
     3181 tcccgtggag cggcctctga cgttgttcct gaacggccag gaaatcgtta ccgcgatgac
     3241 catcggcgac tacccgaagg aactggcggt aggctttttc ctcaatcaag ggatgctgcg
     3301 cccagacgac gtaatcaccg ggatcgacta cgacgaagaa ctctcagtgg ccgtcgtacg
     3361 caccgagcgg aagacgaact acgaagaaaa gctcaagaag aaaacccaga cgtccggctg
     3421 tgcgcagggc actgcgttcg gcgatcttat ggatgtcatc gaaggcatcc gcctgccgga
     3481 ggcggagttg cgcacctcat ggctctaccg gctgacccac acgatcaaca cg
//
LOCUS       DATAVD010000618         1995 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_243811, whole genome shotgun sequence.
ACCESSION   DATAVD010000618 DATAVD010000000
VERSION     DATAVD010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1995
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_243811"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..394
                     /locus_tag="VHX39_11515"
     CDS             <1..394
                     /locus_tag="VHX39_11515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991787.1"
                     /translation="FSMFLFLSLAFAKRYVELARACDSGAMDLNRRSYLPSDLGLIES
                     LGPNSGYLAVLVLALYVNSDHTRQLYPRASLLWLLCPLLLYWITRTWFLAQRRALSED
                     PVTYAVHDTVSWATAAAAMVIVLAAATA"
     gene            complement(434..1828)
                     /locus_tag="VHX39_11520"
     CDS             complement(434..1828)
                     /locus_tag="VHX39_11520"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX3991788.1"
                     /translation="MVARMQREAIAPEWRAHLPLTLSCYGPAYYGTVALVDRFDPLGP
                     SVEVGRFINLLAALVTAALIYLMTLRLTGVRVQAATGALLFLVSPIACYWLPAYRVDM
                     LAVLCSCGAFMAIAGGISLRRLVLCALLVALGSLFKQVAALSALPIWLWLLANRQRRQ
                     AAVYAGLVAACGLAAWGLADLVTDGSALGSAVKSNLNRMRIANGLSVFFGFVQYPFSL
                     LSLAAAGWLLKPRTRNWQQPASLFALALLTSVAVNVVLSCKEGAAPNYFLEASMLGSI
                     VLTLTVVPASEDLSRPKVRWAWAGLGLGLVAPALVLLPFCHGGFHTRNADSSVVKASS
                     IAGEHATVLADSEWIDAVIRQGALPAVNDSFLLFLADRQGSPAVQQLVDEMHSGRIEF
                     MLLANPPEYYRQCEATRWPSSVLQAMLRDYEPVSNDQHAYLYRHRSAVANHTRADGST
                     SAARASGGGGTTIR"
BASE COUNT          405 a          650 c          613 g          327 t
ORIGIN      
        1 gttttcgatg tttctgttcc tgtcgttggc gtttgccaag cgatacgtcg agctggcccg
       61 cgcttgcgac tcgggcgcga tggacctgaa tcggcgcagt tacctgccgt cggatttggg
      121 tttgatcgaa agcctggggc ccaacagcgg atacctggct gtgctcgtct tggcgttgta
      181 cgtcaacagc gatcataccc ggcagctcta tccccgggcg tcgctgctgt ggctgctttg
      241 cccgctgttg ctgtactgga tcacccggac ctggttcttg gcccagcggc gggcactctc
      301 cgaggatcca gtgacgtacg ccgttcacga caccgtaagc tgggcgaccg ccgccgcagc
      361 aatggtcatc gtgctggcag cggctaccgc ataaatcgcg agccggcggc cgcgccgcta
      421 gggcgcccca tgcctaccgg atcgtggttc cgccgccgcc agaagctcgc gctgccgacg
      481 ttgatccgtc agcgcgggta tgattggcaa ccgctgatcg gtgccgataa agataggcgt
      541 gctggtcgtt ggaaaccggc tcgtaatcgc gcagcatggc ctgcaacacg ctgctcggcc
      601 aacgagtggc ctcgcactgg cgatagtatt ccggcggatt tgccaacagc atgaattcga
      661 tccgcccgct gtgcatctca tcgacgagtt gctgcacggc tggactgcct tgacgatcgg
      721 ccaggaagag caggaacgag tcattaaccg ctggcagcgc accttgccgg atgacggcgt
      781 caatccattc cgagtcggcc agcacggtcg cgtgctcgcc ggcgatcgaa gaggccttaa
      841 ccacggacga atctgcattg cgagtatgaa agccgccgtg acagaacggc agcaacacga
      901 gggcgggcgc cacgagcccc agcccgagac ccgcccaggc ccagcggacc ttcggccggg
      961 acaagtcttc gctggccggc accacggtga gtgtcagcac gatgctgccc agcatggacg
     1021 cttcgagaaa gtaattgggc gccgcgcctt ctttgcagct caggacgacg ttcacggcca
     1081 cgctggtgag cagcgccaag gcaaacagcg atgccggctg ttgccaattc cgcgtgcgcg
     1141 gtttgagcag ccatccggcg gccgccaggg acagcagcga gaagggatac tgcacgaagc
     1201 caaaaaacac gctcaacccg ttcgcgatcc gcatgcggtt caagttggat ttgactgccg
     1261 agcccagcgc cgagccatcc gtcacgagat ccgctagtcc ccatgccgcc agtccacagg
     1321 cagccaccag gccggcataa acggccgctt gtcgccgctg gcgattggcc agcagccaca
     1381 accagatcgg caaggccgaa agcgcggcca cttgtttaaa cagcgaaccc agcgccacga
     1441 gcaacgcaca cagcacgagc cgccgcaggc tgataccgcc ggcaatggcc atgaaagcgc
     1501 cgcaactgca gagcaccgcc agcatgtcga cccgataggc cggcagccaa taacacgcaa
     1561 tgggcgagac cagaaacagg agcgcaccgg tcgccgcttg cacgcggaca ccggtcagcc
     1621 gcagggtcat cagataaatc aaggccgcgg tcaccagggc ggcaagcaga ttgatgaatc
     1681 gacccacctc cacgctggga ccaagcgggt cgaaacggtc cacgagcgca accgttccat
     1741 aatatgccgg tccatagcaa ctcagcgtga gcggtagatg tgcccgccac tctggagcga
     1801 tcgcttcgcg ctgcattctg gccaccatcg ccagaatggg gccttcgccg tattcgatca
     1861 ggtcgcgatc cagcgagcgg aggaagtagc aggtcactgc cagcacgaac gagaccagga
     1921 ttaagccgcg aatccatgct cgatgccgcc gtccgatgcc tggttgaggc cgcccgacgt
     1981 ccgggccgca ctcat
//
LOCUS       DATAVD010000619         2416 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2849624, whole genome shotgun sequence.
ACCESSION   DATAVD010000619 DATAVD010000000
VERSION     DATAVD010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2416
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2849624"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            10..156
                     /locus_tag="VHX39_11525"
     CDS             10..156
                     /locus_tag="VHX39_11525"
                     /inference="COORDINATES: protein motif:HMM:NF024763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991789.1"
                     /translation="MFRLNDDRQSEAFDPAGDTEEKILEAAENCPVSAIFVEDAETGE
                     RLFP"
     gene            complement(208..591)
                     /locus_tag="VHX39_11530"
     CDS             complement(208..591)
                     /locus_tag="VHX39_11530"
                     /inference="COORDINATES: protein motif:HMM:TIGR02246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgcJ/EcaC family oxidoreductase"
                     /protein_id="HEX3991790.1"
                     /translation="MVDLKAQISANEAAWTAAANRGAAAAVAAMYTDNATMLPPGADM
                     QKGRAAIEKIVGSIGHSGVRNYTLTTLDVEQLGPSAAREIGEFSLDAPGPKKKWVKVY
                     GKYATVWKLVDGKWLLDVDIWNMNK"
     gene            842..2170
                     /locus_tag="VHX39_11535"
     CDS             842..2170
                     /locus_tag="VHX39_11535"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3991791.1"
                     /translation="MAHAPEASAQDHRRRFHLPSTHLPHGLVTFPSRLRPWIETWFLV
                     YAVLGIVQGGMLPLLLPLSAGGSTHAGAIVGVMNLAGVSAPIWGHLADRWRLHRQVLL
                     AGTLAALVALLFMPMQLPLPLKTMFAAILGVGFAAANTVANMFIVEVRPPDEWDARIG
                     ALQALSGLGQVLGLLLAGLIGGRYALAFAVAAALVAASVPMAWLSLRGIHVPVRRSVA
                     TAHPPVGGEGWSGSPQRMFHIPTLHGLRTLWIELEMPFARLMIVWFVAFIAISAVLTM
                     LPLALIRVFGVAPGLPATTYAFAAAGSLLMYPLLARIAKQHGAWPVLRAGFAARTVAM
                     GILAVAFLSAIGGVPLALVGFVVLVLAWPLLGVSGTALAAQLAPGEKGEALGLFNAAS
                     SLAGAIGAFLGGWAMATVGYGTVCGVAAGVVGLAALCSGGGHRHSHPDQQ"
BASE COUNT          371 a          737 c          794 g          514 t
ORIGIN      
        1 gtgccgaaag tgttccggct gaatgacgac cggcagtcgg aggcattcga tccggcgggg
       61 gataccgagg aaaagatcct ggaagccgcc gagaattgcc cggtcagcgc aatcttcgtg
      121 gaggatgccg agaccgggga gcggctgttt ccctagcctg gctcccgccc gtcctaccgg
      181 accgctccgg ctgaacagct ggggcggtta cttgttcata ttccagatat cgacgtccag
      241 cagccacttg ccgtcgacca gcttccagac cgtggcgtat ttgccgtaga ccttcaccca
      301 cttcttcttc ggacccggtg cgtcgagact gaactctccg atctcgcgcg cggcactcgg
      361 cccgagctgc tctacgtcga gggtggtcag cgtgtaattc cgcaccccgg agtgaccgat
      421 cgagccgacg atcttttcga tggccgccct gcctttctgc atgtccgcgc ctggcggcaa
      481 catggtcgcg ttatcggtgt acatggcggc gacggcggcg gcggcgccgc ggttggcagc
      541 ggcggtccag gctgcttcgt tggcactgat ctgggccttc agatcgacca ccgagggtgc
      601 aactatcgga ggggccggcg tcggttgagt acagccaaac aacagtaaca gaacggccgc
      661 aggtgcagct ttcttcatga attatcccct gttttactga ggcgtgtcag caacgtctcg
      721 cgccgtcagc ggcgtgtcaa ccttggcggc agtgccggcg caccagggcg ctcgcagtga
      781 gtacgcttgg tccgaccgcc ccggcgggct atcaaccttt gtgggcatag gggaccgcgg
      841 tatggcacat gcaccggagg cctcggcgca ggaccatcgg cgccgatttc acttgcccag
      901 tacgcatttg ccacatgggc ttgttacgtt tccgagccgg ctaaggccct ggatcgagac
      961 gtggtttctc gtatacgcgg tgctcggcat tgtgcagggc gggatgctgc cgctgctgtt
     1021 gccactttcc gccggcggat caacccatgc cggagcaatt gtcggcgtca tgaacctggc
     1081 cggcgtgtcc gcgccaatct ggggccacct cgccgatcgg tggcgactgc accgccaggt
     1141 cctgctggcg ggcaccttgg ctgcgctggt ggcattgctg ttcatgccga tgcaactccc
     1201 tttaccgctc aagacgatgt ttgctgcgat ccttggggtc ggtttcgccg cagcgaacac
     1261 ggtggcgaac atgttcatcg tcgaggtgcg gccaccggat gagtgggacg cccgcatcgg
     1321 cgcgttgcaa gccctgagcg gtctcgggca agtactgggt ttattgctgg ccggcctgat
     1381 cggcggacgc tacgcattgg ccttcgcggt cgcggcggca ttggtggctg cgtcggtgcc
     1441 gatggcatgg ctgagcttgc gcggtattca cgtcccggtt cggcgtagcg tagcaactgc
     1501 gcacccgccg gtcggcggtg agggatggtc cggctcgccg cagcggatgt tccacatacc
     1561 cacattgcat gggctccgga cactgtggat cgaactggaa atgccgttcg cacggctgat
     1621 gatcgtgtgg ttcgtggcat tcattgcaat cagtgcggtc ctgacaatgt tgccgctggc
     1681 actcatccgg gtatttggcg tggcgccggg cctgccggcc acgacttatg ctttcgccgc
     1741 cgccggaagc ctgttgatgt atccgctgct ggcgaggatc gcgaaacaac atggcgcctg
     1801 gccggtgctg cgcgcaggtt ttgcggcgcg caccgttgcc atgggaatcc tcgcggtggc
     1861 gttcctgtcc gcaatcggag gcgtgccact cgcgctggtc gggtttgtgg ttctggtctt
     1921 ggcatggccg cttctgggcg tcagcggaac cgcactcgcc gcgcaactgg cacctggcga
     1981 gaagggtgag gcgctcggcc tgtttaacgc agcctcctca ctggcgggcg ccatcggagc
     2041 ctttctcggc ggctgggcga tggccacggt cggctacggt acggtgtgcg gcgtggcggc
     2101 aggagtcgtc ggactggctg cgctgtgttc tggtggcggc caccgccatt ctcaccccga
     2161 ccagcaataa gccacatgcc gggatggttt cgacagcggc atttccgcgc tcgcggactg
     2221 caatcgtgtt tggtcgcgca tacaagatcg gtgcacacaa ttcttgggtt ccgtgcgtgt
     2281 gtccgctgta ctatgcaccg cataacaccg gagttgattg gcgttcaccg gcggttccac
     2341 ccatttatgg atggacacca aatcttgaca gaccccgaag cacggattta gcattcgttg
     2401 agtttcaccg ccgctt
//
LOCUS       DATAVD010000620        13455 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3409332, whole genome shotgun sequence.
ACCESSION   DATAVD010000620 DATAVD010000000
VERSION     DATAVD010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 13455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13455
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3409332"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1282)
                     /locus_tag="VHX39_11540"
     CDS             complement(<1..1282)
                     /locus_tag="VHX39_11540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3991792.1"
                     /translation="MTRLGISGWLTRGALRSPLTPLFLFAALAAGMVALLTIPREEEP
                     QISVPMVDIMVSANGLKAADAAELVTKPLEAIVKAINGVEHVYSQTQDDQVLVTARFL
                     VGTSEDDAVLRVHEQIRANINRIPIGIPEPLVVRRGINDVPIVVLSLSPRPEAAERWT
                     DKDLYDLAVKLREEMVKVDNVGTSFIAGTSPEQIRVEPDPEKLSLYGVTLQQLIAKVR
                     DANRAFVAGTVRDAGVSRVVAAGQTLQGMPDIGLLLVSTRDGRPVYLRDLARVIVGPS
                     AAESRVWNIAADAQGQWHRTPAASLAIAKRAGANAVVVSQAILTRVAGLRGRLIPPDV
                     RVDVTRDYGATANDKANELLFHLGLATVSIVVLIAVAIGWREAVVTLVVIPTTILLTL
                     FAARIMGYTINRVSLFALIFSIGILVDDAIVVVEN"
     gene            complement(1279..2274)
                     /locus_tag="VHX39_11545"
     CDS             complement(1279..2274)
                     /locus_tag="VHX39_11545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX3991793.1"
                     /translation="MWRRCFLAMTLLSVPLVMPAQAAETLTVHPANVADEKAVFATVE
                     SANVVPARARIGGTVAELSVHPGNAVQPGQVIAVVADAKLLLTIAGLDAQITAVQSQL
                     AQAQTDFSRAEALFRQGAGTRVAMDLARTAMDVATSTMKARTADRDVARQQLSEGQVL
                     APVAGRVLTVPVTNGTVVLGGDPLASIAEGNYILRLRVPERHARTLKVGDTVRVDGTD
                     FGRTGAWFGKVTLIYPTIQEGRVVADAEVPGLGDFFVGERVRVWIGAGERPAFVIPES
                     FVVSRFGLDYVRRQQQGGTPEETPVQRGQERPTEAMPDALEILSGLHAGDVLVKP"
     gene            complement(2300..2662)
                     /locus_tag="VHX39_11550"
     CDS             complement(2300..2662)
                     /locus_tag="VHX39_11550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX3991794.1"
                     /translation="MTALVKLHEITPQDLHDQLLRREVILVDVREAHEFAAERIHGAL
                     LFPLSTFDPLALSHDPRRPVVLQCGSGKRSAMALTLCSAAGVHIDTHLVGGIAAWKSA
                     GLPTVTLDPATGVVADRR"
     gene            complement(2659..3066)
                     /locus_tag="VHX39_11555"
     CDS             complement(2659..3066)
                     /locus_tag="VHX39_11555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX3991795.1"
                     /translation="MKVNAAAMRESADRAAEFLKSLGNRHRLLILCQLLDAERSVTDL
                     SQFLEIRDSTVSQHLALLRREGLVKARRDGQTIWYSLNSEPAREVLAALYRCFCAVPE
                     TAECSGIAPTVTKVSSTRTAGRSRRIMQRIASR"
     gene            3160..4458
                     /locus_tag="VHX39_11560"
     CDS             3160..4458
                     /locus_tag="VHX39_11560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012569039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3991796.1"
                     /translation="MADIVVLGAGLGGTLMAFELGDHLRPSDRVTLIGQSESYQFVPS
                     NPWVAVGWRKRKDIEVDLAAVTKRKNIRLRTEGARAVHPHEKFVELMNGEEVRYDYLV
                     IATGPDLAFDEIPGLGPEANTQSICQTAHAEQARAAFETFCTRPGPVIVGAVQGASCF
                     GPAYEFAFILDTELRRRKLRDQVPMTFVTAEPYIGHLGLDGVGDTKGLLESEFRQRHI
                     KWVTNARVAGIAPDTMSVEELAADGSVQATHQLPFNFAMMLPAFRGVPAVRGIEGLVN
                     PRGFVLVDKYQRNPVFPEIFAIGVGVAIPPIGPTPVPVGVPKTGFMIESMVTAVAHNI
                     GALLRNEPVHARATWNAVCLADFGDGGVVFVAQPQIPPRNVNWVAKGAWVHLAKVAFE
                     RYFLRKIRTGESEPFYERFVLNRLDIQKLKQPEMDPVAHV"
     gene            4451..4912
                     /locus_tag="VHX39_11565"
     CDS             4451..4912
                     /locus_tag="VHX39_11565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEX3991797.1"
                     /translation="MSETRHVVCPHCATVNRVPVDRPAVAARCGGCHQALFSGQPIEV
                     DEAGFERHVRANGIPVLLDVWAPWCGPCRTMAPAFARAAAALEPDFRLIKLNADTAPE
                     VTSKLGVRGIPALFLIRHGTVAAQTAGALDTASIVAWARRHAAQTETTSGR"
     gene            4926..5129
                     /locus_tag="VHX39_11570"
     CDS             4926..5129
                     /locus_tag="VHX39_11570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015460570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2892 domain-containing protein"
                     /protein_id="HEX3991798.1"
                     /translation="MSIDRAVMFFAGALALLGVVLGWLVSPYWYLLSAFVGLNLMQAS
                     ITGFCPAAMVFKFFGLKRGTAFE"
     gene            complement(6080..6682)
                     /locus_tag="VHX39_11575"
     CDS             complement(6080..6682)
                     /locus_tag="VHX39_11575"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX3991799.1"
                     /translation="MKMIETLDSGGYVADVMMRHVVVARSDCPIAAIARPMIDNRISA
                     VPVVDDGKLIGIVSENDLLRRVERGTERQRPRGLHFVTSDATPLEEYVGSHGQTAGEV
                     MTPEVLTVLPDTPIAEIADIFGSRHIKRMPVVDQEKIAGIVGRANLMQALAVQTPALA
                     QGGDRSEQRSDDFGALTSLTSMDRGRKLMGLQFTAGVIGG"
     gene            7165..7560
                     /locus_tag="VHX39_11580"
     CDS             7165..7560
                     /locus_tag="VHX39_11580"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX3991800.1"
                     /translation="MSQCPPVTGLRRVLTLWPLIFYGLGVIVGAGIYVAIGAVILRAG
                     ETAPLSFVLAGVTAGLTGLCYAELAGRFPEASGGVAYVRHGFGSDRLAQVTGLALTLA
                     VAVSAASIASGTIQYLTNLLKLPVPLLIR"
     gene            7840..8352
                     /locus_tag="VHX39_11585"
     CDS             7840..8352
                     /locus_tag="VHX39_11585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991801.1"
                     /translation="MVFLGAVAVSIALYVLVVTAVVLSDRHTGNPLLGLFEGKGASVF
                     AIVGAFAVGNGVLVQIMMLARLFYGMASRGQLPVFLAWVHPRAHTPVPTTLVAGAIVL
                     AVTLLVPFERLVALSNAITLAVFALVDLALWRLRLLGPPPTEGFHAQAWVPPVAAASS
                     IALMASELLL"
     gene            complement(8420..8932)
                     /locus_tag="VHX39_11590"
     CDS             complement(8420..8932)
                     /locus_tag="VHX39_11590"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEX3991802.1"
                     /translation="MVSTSGVILTFIQTHQSWAAPLVFLLAFGKSIALVSLVLPATAA
                     LVAIGGLFGIPGIPFWPVVTAAILGAFLGDWLSYAIGCYFKDAITLVWPLSRYPTLMP
                     RARALFRRWGVVGVFLGRFTGPLRAIVPLAAGIGAMPFIPFQIANLASAVIWAVGLLA
                     PGVILSRITW"
     gene            9299..9448
                     /locus_tag="VHX39_11595"
     CDS             9299..9448
                     /locus_tag="VHX39_11595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991803.1"
                     /translation="MIMIACYLGIAPANPVCLALTTGDEASLRVTEGTFASISDSEAF
                     IYAFG"
     gene            9766..10829
                     /locus_tag="VHX39_11600"
     CDS             join(9766..10258,10258..10829)
                     /locus_tag="VHX39_11600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611116.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEX3991804.1"
                     /translation="MSAISITRTELSAAELRGEAVQTKDSRIARRLLAIALVMDGHSR
                     SAAAEACAMDRQTLCDWIHRYNERGVPGLADHSHPGPRPMLTAAQEAEVDAWVVQGPD
                     LATDGVVRWRRIDLRNRIEARFGVSFHERSIGKLLRRLNFRRISVRPQHPESDEVEQE
                     AFKKKFAELVQSAIPISEKFRPIEFWWQDEARVGQQGTLTRIWARRGSRPRAVRDHRF
                     TWAYLFGATCPARGVGAAIVMPEVNVEAMNTHLAEISRNVSVGAIAVLVLDGAGWHGS
                     PRLKIPDNIALLRLPPYAPELNPTENLWEYLRGNQLSNRLYKNHEDIVDACCDAWNAL
                     MRLPDVIRSIGNREYAQVKV"
     gene            10844..11431
                     /locus_tag="VHX39_11605"
     CDS             10844..11431
                     /locus_tag="VHX39_11605"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3991805.1"
                     /translation="MPALVAALQRDAPGMDIQIRTIERNRLHDQLAGGELDLAIAPAL
                     SGTRDLRTEPLWTDHLITLVSADNPIRLPMTLDSFAAAAHVVDAGHVQVAADGQGVSV
                     VDSILAARGLRRRIAVVLPNSAGIPYVVAATSLVATLPSRIIRDLAVIPELRVVPAPL
                     PQVEVSPHLIWHVRTQNSPLRAWVRGVIKGIAAEA"
     gene            complement(11994..13187)
                     /locus_tag="VHX39_11610"
     CDS             complement(11994..13187)
                     /locus_tag="VHX39_11610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HEX3991806.1"
                     /translation="MRASLEVADIFRAAGRAYRATHAGHLSLHQLKVMSAIEHCRTAA
                     LGGHVEACEDCGHWRIAYNSCRDRHCPRCQGAAARTWLAEREADLLPVGYFHVVFSVP
                     AEVADIAWHNKAVVYDLLFRAASETMLTIAADRRHLGARIGITAVLHSWGSAMTHHPH
                     IHMIVPGGGISLDGTHWVSSRPAFLLPVRVLSKLFRRLFLTRLFELHRAGRLAFFGDQ
                     AGLREERAFQRLIARLRKKNWVVYAKPPFGGPEAVLAYLSRYTHRVAISNRRLISLDE
                     SGVTFRYKDYRRDGAERYRTMTLATDEFIRRFLLHVLPKGFHRIRHYGLLASAGRKAN
                     VARARALLAVPPVDEPADPIELTEPRPPCPCCGGRMIIIETFQRWAQPRAPPVCPAPT
                     GTVTP"
     gene            complement(13192..>13455)
                     /locus_tag="VHX39_11615"
     CDS             complement(13192..>13455)
                     /locus_tag="VHX39_11615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018307960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEX3991807.1"
                     /translation="QLHRIVVEAAQAAEITKRVGPHTLRHSFATHLLEDGVDIRVIQV
                     LLGHAKLDNTAFYTKVATRTVRTVTSPLDKLGMFRAGDIAPTG"
BASE COUNT         2535 a         4092 c         4266 g         2562 t
ORIGIN      
        1 tgttctcgac cacgacgatg gcatcgtcaa ccagaatgcc gatcgaaaag atcaacgcaa
       61 acaggctgac ccggttgatg gtgtagccca tgatccgtgc ggcaaacaac gtcagcagaa
      121 tggtcgtcgg gatcaccacc agcgtgacca cagcctcgcg ccagccgatc gccaccgcga
      181 tcagcacgac gatggaaacc gtggcgagac cgagatgaaa cagcagctca ttcgccttgt
      241 cgttcgccgt ggcgccgtag tcccgggtga catcgacccg cacgtccggc ggaatcaagc
      301 ggccacgcaa accggccacg cgcgtcagta tcgcctgaga aacgaccacc gcattggcgc
      361 cggcgcgttt cgcgatcgcc agactggccg ccggcgtgcg atgccactgt ccctgggcgt
      421 cggctgcgat attccacaca cggctctcgg ccgcactcgg gccaacgatg acgcgcgcca
      481 gatcgcgcag gtagaccggc cgcccgtcgc gggttgacac cagcagcagg ccgatatctg
      541 gcatgccctg cagcgtctga cctgccgcca caacacgaga cacgcccgca tcccgcaccg
      601 tgcccgccac gaaggcccgg ttggcgtcgc gaaccttggc gatcagttgc tgcaacgtta
      661 cgccatacag cgacaacttc tcggggtcgg gttccacgcg gatttgttcc ggcgaggtgc
      721 cggcaataaa gctggtgccg acattgtcca ccttcaccat ttcctcgcgc agtttcaccg
      781 cgaggtcgta cagatccttg tcggtccaac gctcagccgc ctcaggtcgc ggtgatagcg
      841 aaagcacgac gatcgggacg tcgttgatgc cgcggcgaac caccagcggt tccggaatgc
      901 cgatcggaat ccgattgatg ttggcgcgga tctgctcatg cacgcgcaga acggcgtcgt
      961 cctcgctggt gccgaccagg aaccgggcgg tcaccagcac ctggtcgtcc tgggtctgac
     1021 tgtagacgtg ttccacgccg ttgatcgcct tgacgatcgc ctccagcggt ttggtcacca
     1081 actccgctgc gtcagcggcc ttcaaaccgt tggcggacac catgatgtcc accatcggca
     1141 cactgatctg cggctcctcc tcgcgcggga tggtgagcag tgcgaccatg ccggctgcca
     1201 gcgctgcgaa caggaacaga ggcgtcaacg gcgagcgcag tgcgccccgc gtcagccagc
     1261 cggatatccc gagcctggtc acggttttac cagcacgtcg cccgcgtgca gaccggacag
     1321 gatttccaac gcgtccggca tggcctccgt cggacgttcc tgaccgcgct gcaccggcgt
     1381 ttcctccggt gtgccacctt gctgctggcg ccggacgtaa tcgaggccaa accggctcac
     1441 cacgaagctc tcggggatga cgaacgccgg ccgctcgccg gcgccaatcc agacacggac
     1501 ccgttccccg acgaagaaat cgccgaggcc aggcacctcg gcatcagcca cgacgcggcc
     1561 ttcctggatg gttggataga tcaaggtcac tttaccgaac cacgccccgg tgcggccgaa
     1621 gtcggtcccg tcgacacgca cggtgtcacc gaccttcagc gtacgggcat ggcgctcggg
     1681 cacccgcaga cggaggatgt aattgccctc tgcaatcgag gcgagcggat cgccgccgag
     1741 tacgacggta ccgttggtga ccggcacggt gagcacccga ccggcaaccg gcgccagtac
     1801 ctggccctcg ctcagttgct ggcgtgccac atcgcggtcc gcggtgcgcg ctttcattgt
     1861 cgaggtggcg acatccatcg cggtgcgcgc cagatccatg gcgacgcgcg tgccggcacc
     1921 ctgacggaac aacgcttcgg cacggctgaa gtcggtctgc gcctgcgcca gttgcgactg
     1981 cactgcggtg atctgcgcat ccaggccggc gatggtcagc aacagctttg cgtcggccac
     2041 cacagcgatg acctggcccg gttgcacggc gttgccggga tgcacgctca actcggcgac
     2101 ggtgccgccg atgcgcgcac gtgccggcac gacgttggca ctttccaccg tcgcgaacac
     2161 cgccttttcg tcggcgacat tggccgggtg caccgtcagc gtttcggccg cctgggcggg
     2221 catgaccagc ggcaccgaaa gcagagtcat ggccaggaaa cagcgtcgcc acattggatt
     2281 ggtcctttgt cgcgggcctc tatcgacgat cggccacgac gccggtcgct ggatcgagcg
     2341 tcaccgtggg caggccggcc gatttccacg ccgcgatgcc gcccaccaga tgtgtgtcga
     2401 tatgcacgcc agccgcgctg cacagcgtga gggccatggc ggaccgcttg cccgagccac
     2461 actgcagcac gaccgggcgc cgaggatcgt gcgacaaggc caacggatcg aaggtcgaga
     2521 gcgggaacag cagcgcgcca tggatgcgtt ccgctgcgaa ctcatgcgct tcccgcacgt
     2581 cgaccaggat cacctcacgc cgaagcagct ggtcgtgcag gtcctgtggc gtgatttcgt
     2641 ggagtttcac aagtgcggtc atcgcgatgc aatcctttgc atgatgcggc gagagcggcc
     2701 cgccgtccgg gttgacgaaa ctttggtgac tgtgggcgcg atgccgctgc actccgccgt
     2761 ttcgggtacg gcgcagaagc agcgatacag cgccgccaac acttcccggg cgggctcgct
     2821 gttcagcgaa taccagatcg tttgaccgtc gcggcgcgcc ttcaccagac cctcccggcg
     2881 caacagcgcg agatgctgcg atactgtcga atcccggatt tccaggaatt gactcagatc
     2941 agtgaccgag cgctcagcgt cgagtagctg acagagaatc aacaggcgat gccggttgcc
     3001 taacgacttc aggaactcgg cggcccgatc ggcggattcg cgcatggcgg cggcgttgac
     3061 tttcatactt gcgtatctac gtattgacga atatatagtc aagccatttc gcggcgcggg
     3121 tgacaccgcc aacggaacaa aaggtgagga aggtgcaaaa tggcagatat cgtggttctt
     3181 ggtgccggtc tcggtggcac gctgatggcc ttcgaactgg gcgaccatct tcgccccagc
     3241 gatcgcgtga cgctgatcgg ccagtccgaa tcctatcagt tcgtgccgtc aaatccctgg
     3301 gtggcagtcg gttggcgcaa gcggaaggac atcgaggtcg atttggccgc cgtcaccaaa
     3361 cgcaagaaca tccgccttcg taccgagggg gcccgcgcag tacatccgca tgaaaaattc
     3421 gtcgaactga tgaacggcga ggaggtccgc tacgattacc tcgtgatcgc caccggcccg
     3481 gacctcgcgt ttgatgagat cccagggctc ggccctgagg ccaatacgca atcgatctgt
     3541 cagactgcgc atgccgagca ggcgcgtgct gcgttcgaga cgttttgtac ccgcccagga
     3601 ccagtgatcg tcggtgcggt gcaaggtgcc tcatgcttcg gtccagctta cgagttcgcg
     3661 tttattctgg atacggaact gcgccggcga aagctgcgtg accaggtgcc aatgacgttc
     3721 gtgaccgccg aaccctatat cggccatctc ggcctggatg gtgtcggtga caccaaaggt
     3781 ctgctggaat cggagttccg ccaacgccat atcaaatggg tcaccaatgc ccgtgttgcc
     3841 gggattgcgc cggataccat gtcggtggag gaactcgcgg ccgacggcag cgttcaggca
     3901 acgcatcaat tgcctttcaa cttcgccatg atgctgccgg cgtttcgcgg cgtgcctgcg
     3961 gtgcgcggga tcgaaggcct cgtcaatccg cgcggcttcg tgctcgtcga caagtatcaa
     4021 cgcaacccgg tgttcccgga gatcttcgca atcggagttg gtgtggcgat ccctcccatc
     4081 gggccgacgc cggtaccggt cggggtgcca aagaccggtt tcatgatcga atcgatggtc
     4141 accgcggtgg cgcacaatat cggtgcattg ctgcgcaacg aaccggttca cgcgcgagcg
     4201 acctggaatg cggtgtgcct ggcggatttt ggcgacggcg gcgtcgtttt cgttgcgcaa
     4261 ccgcaaatcc cgccgcgcaa cgtcaactgg gttgccaaag gtgcctgggt gcatctggcg
     4321 aaggtcgcgt tcgagagata tttcctacgt aagattcgca ccggggaaag cgaaccgttc
     4381 tacgagcggt tcgtgctcaa tcggctcgat atccagaaac tgaaacaacc cgaaatggat
     4441 ccggtggccc atgtctgaaa cccgccacgt cgtttgccca cattgcgcaa cggtgaaccg
     4501 cgtacccgtg gaccggcctg ccgttgccgc ccgttgtggc ggttgccatc aggccttgtt
     4561 ctccgggcaa ccgatcgagg tcgatgaagc cggtttcgag cgccacgtcc gggccaatgg
     4621 catcccggtt ctgttggacg tctgggcgcc gtggtgcggc ccatgccgaa ccatggcgcc
     4681 ggcctttgcc cgggccgcgg cggcgctgga gccggatttc cggttaatta agctgaacgc
     4741 ggatactgcg ccggaggtca cgtccaaact cggtgtgcgc ggcattcccg cgttgttttt
     4801 gattcgccat ggcactgtcg cggcgcaaac cgcgggggcg ctggataccg cctcaatcgt
     4861 cgcatgggcg cgccgccatg ccgcgcaaac cgaaaccacc agcgggcgtt aaggagcaca
     4921 atgtcatgag tatcgatcga gcggtcatgt ttttcgcggg ggccctcgcg ttgcttgggg
     4981 tggtgttagg ctggttggtc agcccctact ggtatctgtt gagcgcgttc gtcgggctga
     5041 acctgatgca ggccagtatt acaggtttct gcccggcggc gatggtgttc aagtttttcg
     5101 gtttaaaacg aggcacggcg ttcgagtgaa gcgcaggcca ctcaataggc tacaaggggc
     5161 agaatggtga gcgtggcgtg gtttcacgtc ggtcaccggg cgcggcaggt gtcaatgtcc
     5221 agccaggtcg gcgcaagaca gagcacgctt cggcaattcg ctgacatttc cgcctggtcg
     5281 atgttacctg ctcgtcgagt gaatgagaaa agcgccggtt ctcgccatgc ttcccaatcg
     5341 tccagtcttg gatgtacaag cctggattta cttttgtgac gcacagctgt tgcaacgttt
     5401 tggttttgat gacgtatcta aatcaccata accggttgga atcgtgggaa cgcaggctga
     5461 tggaagttgc aagtattttg taaggagttt gcggcatcgg agcggattgc caggccttat
     5521 catggcctgc aacgtgcccg gaatgaccta aaatgcgtcg caatttcgcc atgcgtcgcc
     5581 cggactcttc gcgtgtttaa tgagcactcc ggaggttgca catgcaccgt gccatcagtt
     5641 tcatcgcggc ggtcgggttg gtcgttagcc tcgcgggttg cgggcagaca cctggtcaac
     5701 gagctctgtc tggcggcctg atcggtgcag ggggcggcgc gggtctcgct gccgtgacgg
     5761 gtgggaaccc cctttttggt gcgctcgtcg gtggtggcgg tggagccctc actggcgcgc
     5821 tgacagcgcc acaacgtcgg cgctatccct actaaccagt gggccgtaca gcgggctacc
     5881 gagcggtcat gccaactcgc aggtaggggc gtggagggct ggcccgcaag cagggacgtc
     5941 tgcatggctg atagccgtat cgttaacgac acgagcggtt cacgtcccag tgccaggcaa
     6001 atcgccctgg tcagcacggc agcaagaggc gagcgctcgc atcggttact gtcgatgcag
     6061 gacaggtcac gccaacgcgc taaccaccga tcaccccggc ggtgaactga agtcccatga
     6121 gtttcctgcc gcgatccatt gaggttaaac tcgtcaaagc gccaaagtcg tcggatcgct
     6181 gctcggagcg atcgccaccc tgcgccaacg caggagtctg gactgcgagc gcctgcatca
     6241 gattcgcacg gccgacgatg ccggcaatct tttcctgatc aacaacgggc atccgcttaa
     6301 tatgacgaga cccaaaaatg tccgcgattt ccgcgatcgg ggtatccggc aacacggtga
     6361 gaacttcagg cgtcatgacc tcgcccgccg tctggccgtg cgacccgacg tactcctcca
     6421 gcggagttgc atcggacgta acgaaatgca gccccctggg cctctgacgc tcggtccctc
     6481 gttccactcg cctgagaaga tcgttttcag atacgatccc gatcaatttg ccatcatcaa
     6541 cgaccggaac ggcgctgatg cgattatcga tcatcggcct ggcgattgcc gctattgggc
     6601 aatctgaacg cgccacgaca acgtgacgca tcatcacatc ggcgacataa cctccactgt
     6661 cgagtgtctc aatcattttc atgatgttga tcagacgaac atacgtcgat ccgggtcaac
     6721 actggtcgat gcaaaagcca tgaattccac aacacgaatc cgaagatcct cgcgacgccg
     6781 aactgtgtgc cggacgctgt ggcacctgtg tcacctgacg ccctgattgc agttatgcgt
     6841 gctccgctca acacaacgat cgaaagtggt gatcatggtt tccttcgcca acgccgcaag
     6901 cccctccttg tcgctgtaac ctccggcgcc cggcgaatga tggatacgtc agacacgttt
     6961 ggtggcggct tgcctttgct cacgagacat ccaaccccga aacgggattc aacgcaggcc
     7021 gacagaattg agaccgcaat gctttgcaac gacccatgtc aatgcccgtt cataaccgcg
     7081 gagcaatatt cggattgcca tggatacaag gtgatggtca tccggacatc aaaatccagt
     7141 gtcccattac caggagaaag atcagtgagc cagtgtcctc ccgtcaccgg cctccgccgc
     7201 gttctgactc tctggccgct catcttctac gggttgggcg tgatcgtcgg cgccggcatt
     7261 tatgtggcga ttggcgccgt catactccgc gcaggcgaga cggctccact ttcgttcgtc
     7321 ctcgcgggcg tgaccgcggg cctgaccggg ctctgctacg cggagctcgc gggtcgcttc
     7381 ccggaagcat ctggaggggt cgcctatgtg cggcacgggt tcgggtcaga ccgcctggct
     7441 caggttaccg ggctggcatt gacacttgcg gtggcggttt cagcagcttc gatcgcgtcc
     7501 ggcacaatcc aatatctgac caacctgttg aaactgccgg taccgcttct catacgttga
     7561 cgattggcgg ttttaccgct ctcgccatga tgggcgtcgg caagagcgcg ggccttgccg
     7621 gagcggttgg tatgatcgag atcgttggat tgctcgtcgc cgcttgcgcc gatttcctcg
     7681 cagccccgga tttcgacgtg accgctatga tcccgtccag cgcgcagggt tggggcggca
     7741 cggttgccgg agcatttatc gcgttcttcg cgtttattgg cttcgagaca ttggccaata
     7801 tgggtgagga ggtgaaggac cctcgccgaa ctctgccact tggtattcct gggggcggtg
     7861 gccgtcagta tcgcgctgta tgtgcttgtc gtgaccgcgg tggtgctcag cgatcgacac
     7921 acgggaaacc ctttgctggg attgttcgaa ggaaagggtg catccgtttt tgccatcgtc
     7981 ggggcctttg cggtcggcaa tggggtcctg gtgcagatca tgatgctggc ccgcctgttc
     8041 tacggaatgg cgagtcgggg tcagcttccc gtgttcctcg cgtgggtgca cccgcgtgcg
     8101 catacgccgg tccccactac gctggtggca ggggcgatcg tccttgcggt cacgttgctg
     8161 gtgccgttcg aacgcctggt tgcgcttagc aacgcaatca cattggcagt gttcgccctg
     8221 gtcgacctgg cattgtggcg acttcgattg ctgggtccac caccgaccga agggtttcat
     8281 gcacaagcct gggtaccgcc cgtcgctgct gcgtcgagca tcgccctcat ggcgagtgag
     8341 cttctgctct gatcccgcgg ttcgccgcgg gccacagagc gcgctatccg atctgggcat
     8401 ggcctcagag tcgacgccgt caccatgtta tgcgggaaag tattaccccc ggcgcgagca
     8461 atcccacagc ccagatcacc gccgaggcga gattcgcgat ctgaaacggg atgaaaggca
     8521 ttgccccaat gccagcggcc aacgggacga ttgcacgtag aggtcccgtg aaacgtccga
     8581 gaaacacgcc aaccacgccc caccggcgga acaacgcccg cgccctcggc atcagcgtcg
     8641 gatatcgcga taagggccat accaatgtaa tcgcgtcctt gaaataacag ccgatcgcat
     8701 aggaaagcca gtcgccaagg aatgctccca gaatcgcggc agtgaccacg ggccagaacg
     8761 ggattccggg gataccaaac aatccgccga tcgcgaccag cgccgcagtc gccggcagga
     8821 cgagcgacac aagtgcaatg gatttaccga acgccagcag gaacaccagc ggcgcggccc
     8881 atgactggtg tgtctgaata aacgttagaa taacgcctga cgtcgagacc attccacccc
     8941 ttccaaaaca ttcaatgccg tacggtcgag ccggcaagaa atcccgcacc aaagcgacac
     9001 gatttgacat gatggccacg ggccctcgaa ctcgccgcac gccggctcag ggccagtgga
     9061 atggcgaagg tcccgaccgt tgccttactc agatgacttt cgtgcggtgc ggcgatcact
     9121 cagtgcgcaa ggattgaccc ggtgcaaggc gataccgtgg tgcgaacgca ccgccacagc
     9181 gggttcttcg aaacgaccct ggatgaacgg ctgcgggacc ccggtgcgcg aattctcatc
     9241 gttaccagaa gcacgaccag cgtttgtgtg gcatcgacgg ttcgcgatgc gacgttgcat
     9301 gatcatgatt gcctgctact tggggattgc accggccaac ccggtctgcc tggcgcttac
     9361 cactggagat gaggcctcgt tacgggtgac cgagggaacg ttcgcctcga tatccgactc
     9421 cgaggcattc atctatgcgt tcggatgacc ggttcatggc atgagacctg tgaatttggg
     9481 gggagacaaa cttaatggat ccactcggtc cgctgggtct atcgggaaac gattgattta
     9541 cctgtcatca taggggagga caatctatat acgataccgt aacgtactaa acctcaacgg
     9601 cagcgccctg atcgtggcca atactacaga ttgcacgccg ggatccaggg atagtcgtta
     9661 tgtatctttc atgtaatacc aacggccccg gcctttgact cggcttcccc gaatccattc
     9721 ggtcatgagt cgatgcatcc ctgcgttcta tttatgaggg atgccatgtc ggcgatatcg
     9781 atcacccgaa cggagctgtc cgcagcggaa ctgcgcgggg aggcagtaca gacgaaagac
     9841 agtcgaattg ctcggcgcct gttggcgatc gcgctggtga tggacggcca ctctcgcagc
     9901 gctgcggccg aagcgtgcgc gatggaccgg cagacgctgt gcgactggat tcatcgctac
     9961 aatgagcgtg gcgtccccgg cctggccgat cattctcatc ccggtccccg gccaatgctg
    10021 accgccgcgc aagaggctga ggtcgacgcc tgggtcgtgc aaggtccgga cctcgcaaca
    10081 gacggtgtgg tgcgctggcg gcgtattgat ttgcgtaatc ggatcgaggc ccggtttggc
    10141 gtctcgttcc acgaacgcag catcggcaag ttgttgcgcc ggctgaattt ccgccgcatt
    10201 tccgtacgcc ctcaacaccc ggagagtgat gaggtggagc aggaggcctt caaaaaaaat
    10261 tcgccgaact ggtccagtcc gcgatcccga tcagcgagaa attcaggccg atcgaattct
    10321 ggtggcagga cgaagcgcgc gtcggccaac aaggtacact cacccgcatc tgggcccggc
    10381 gcggttcccg cccgcgcgcg gtgagggatc atcgtttcac ctgggcgtat ctgttcggcg
    10441 cgacctgccc ggcccgcggt gtgggagccg ccatcgtcat gccggaagtc aatgtcgagg
    10501 ccatgaatac ccatttggcc gaaatcagcc gcaacgtctc cgtcggtgcc atcgccgtac
    10561 tggtcctgga tggtgcgggc tggcacggtt cgccgcggct caaaattcca gataacattg
    10621 cgttgttgcg attgccgcct tacgcgcccg aactcaatcc gaccgagaac ctctgggagt
    10681 atttgcgtgg caaccaactc agcaatcgtc tttacaaaaa ccatgaggat atcgtcgatg
    10741 catgctgcga cgcctggaat gcgctcatgc gactacccga cgtgatcagg tcaattggca
    10801 atcgtgaata cgcacaggta aaagtctagg gccgctggta ttactgcccg cactggtggc
    10861 ggccttgcag cgggacgcgc cggggatgga catccagatc cggacaatcg agcgcaaccg
    10921 gctgcacgat caactcgccg ggggcgaact cgatctggcg atcgcgccgg cgttgtcggg
    10981 aacgcgtgat ttacggacgg agccgctgtg gacggatcat ctcattacgc tggtcagcgc
    11041 ggataatccg ataaggctgc cgatgactct ggatagcttc gctgcggcgg cgcatgtcgt
    11101 cgacgcgggt cacgtgcagg tggcagcgga cggacagggt gtcagcgtgg tggacagtat
    11161 cctggcggcg cgcggcctgc ggcggaggat cgcggtggtg ttaccgaact cagccggaat
    11221 tccgtacgtc gtggcggcga ccagtctggt ggcgacgttg ccaagccgga tcattaggga
    11281 cctggcggtg ataccggaat tgcgggtggt gccggcgccg ctgccgcagg tggaggtcag
    11341 cccgcatctg atctggcacg tgcggacgca gaattctccg ttgcgggcgt gggtgcgtgg
    11401 ggtgattaag gggatagcgg cggaggcgta gggagatgcg atcgtcgatt atgctggcct
    11461 gcagcgacct ggctaccgga catatgggcc accacgcgca gacatgaatc gatagtgctg
    11521 cggacagcgc caggaatgat cgcgaccggt gcttgaacag ttaaaagtct taggctgcga
    11581 atgccagcaa agtgtcaatg tccgccatcc gaccctgccg acgtgaatgg ccgctctggc
    11641 gcgcacctcg cctgaagccg tcagtccggt gtcgtgaaga gtttcggatg ccgcctggcg
    11701 tccgaaagtc cccgaggaac gaacccgcgg tgcgcggcct gaggcttatg gggatttgag
    11761 gatttggttg tgctggtggg accgattgtg gtgttcacca gcccgctcgc gatcgccgtt
    11821 tctgcggtct cgccgggcga tcctggcagc gatccgaggc cacggacggg caaagttcgt
    11881 gatggcgtct gggatcagat cgcataacga tgcggacgaa ccgctgggca cgtggtgtgc
    11941 cgatggccga tgcgacaagg caacgacaga gagcgggctc gggccgtgcc gggtcacggc
    12001 gtcaccgtcc cggttggcgc gggacaaacc ggcggcgcgc gcggctgtgc ccagcgttgg
    12061 aaggtttcga tgatgatcat gcgcccgccg caacaaggac agggcggccg cggctccgtc
    12121 agttcgatcg gatcagccgg ctcgtctacc ggcggcaccg cgagcagcgc gcgggcgcgt
    12181 gcgacattgg ccttgcggcc ggcgctggcg agcaggccat aatgccgaat gcgatgaaag
    12241 cccttcggca ggacgtgcag caggaagcgc cggatgaatt catccgtggc cagcgtcatc
    12301 gtgcgatagc gttcggcgcc gtctcggcga taatccttgt agcggaacgt gacgccgctt
    12361 tcgtcgagcg agatcagccg gcggttggag atggcgacgc ggtgcgtgta gcgcgacaga
    12421 taagcgagca ctgcctctgg cccgccaaaa ggtggtttgg cgtagaccac ccagttcttc
    12481 ttccgcagcc gcgcgatgag gcgctgaaag gcgcgttcct cgcgcaaccc ggcctggtcg
    12541 ccaaagaagg cgagccggcc ggcgcgatga agttcaaata gccgtgtcag gaacaggcgg
    12601 cggaacagtt tggacaggac acggaccggc agcagaaagg ctggccggga cgacacccag
    12661 tgcgtgccgt ccagcgagat gccgccaccc ggcacgatca tgtggatgtg cggatggtgc
    12721 gtcatcgccg aaccccagga gtggagcacg gcggtgatgc caatgcgcgc gccgagatgg
    12781 cgtctgtcgg cggcgatggt gagcatggtc tccgacgccg cccggaacag caggtcgtac
    12841 acaaccgctt tgttgtgcca ggcgatgtcg gcgacttcgg cgggaaccga gaatacgacg
    12901 tggaaatagc cgaccggcag caggtcggcc tcgcgctcgg ccagccacgt gcgcgcggcg
    12961 gcgccctggc acctggggca atgccggtcg cggcagctgt tgtaggcgat ccgccagtgg
    13021 ccgcagtctt cacacgcctc gacatgaccg cccagagccg ccgtgcggca gtgctcgatc
    13081 gccgacatga ccttgagctg atgaaggctc aggtgtccgg catgggtggc ccgataagcg
    13141 cgtccggcgg cacggaagat gtcggcgacc tcgagcgagg cgcgcaccgc ctcaaccggt
    13201 gggtgcgatg tctccggccc ggaacatgcc gagtttgtcg agcggactgg tcacggtgcg
    13261 caccgttcgg gtcgcgacct tggtgtagaa ggcggtgttg tccagcttcg cgtgcccgag
    13321 caagacctgg atgacgcgga tatcgacgcc gtcctcaagg agatgggtgg cgaaactgtg
    13381 ccgcaacgtg tgcggtccga cccgtttggt gatctccgcg gcctgtgcgg cctcgacgac
    13441 aatgcggtgg agttg
//
LOCUS       DATAVD010000621         2192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_429991, whole genome shotgun sequence.
ACCESSION   DATAVD010000621 DATAVD010000000
VERSION     DATAVD010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429991"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(66..410)
                     /locus_tag="VHX39_11620"
     CDS             complement(66..410)
                     /locus_tag="VHX39_11620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX3991808.1"
                     /translation="MPILPGFYLALVLYGTATVVWIYVLSRVPLIEAYPWIAGATVTV
                     PLIGWWCHGEQVTPSFWLGMAMIVAGLLLTQLGTLRQWHAVAAGIERNHSTGPARSPT
                     NGHGVSLHALIV"
     gene            674..1152
                     /locus_tag="VHX39_11625"
                     /pseudo
     CDS             674..1152
                     /locus_tag="VHX39_11625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239024.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            1165..1500
                     /locus_tag="VHX39_11630"
     CDS             1165..1500
                     /locus_tag="VHX39_11630"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HEX3991809.1"
                     /translation="MGELDHTRETPLHTVKFASLFAIDVYPVTFDEWDAPPAVGGWGR
                     GRRPVINVTWDDAKSHAMWLSRKAGKHYRLLSEAEWEKAAQPAYALFPVGRCDGAGRR
                     RLRRLRQQL"
     gene            complement(1825..>2192)
                     /locus_tag="VHX39_11635"
     CDS             complement(1825..>2192)
                     /locus_tag="VHX39_11635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991810.1"
                     /translation="DDWLPTGPGAIATATPIRRENALYDTDVSLIFYDSPIPGSFQRH
                     FDQIEADRRYTDLSDNLRYFAADYDRISADRRPASWWLARGELPRRDDAAFAAFVQSY
                     YRYIDRMAGRTRLALAAAR"
BASE COUNT          455 a          720 c          680 g          337 t
ORIGIN      
        1 gacgcggtac cccgcctgcc gaacgatcgg ttcacgctgg cggaccggtc cgggttcgcg
       61 gccctctaca cgatcaaggc atgcaacgag acgccatgac catttgttgg agaccgtgcc
      121 ggtccggtgg agtggtttcg ctcgataccg gccgccacgg cgtgccattg gcgaagggta
      181 ccgagctgcg tcagcagcag gccggcgacg atcattgcca tacccagcca gaatgatggc
      241 gtcacctgct caccgtgaca ccaccagccg atcaggggta cggtcacggt tgcgccggcg
      301 atccaggggt aggcctcgat aaggggcacg cgtgacaaca cgtagatcca aacgactgtg
      361 gccgtgccgt aaagcaccag tgcaaggtag aagcctggaa gtattggcac cagcaggaaa
      421 ccgaggataa gggaacgcca acgggcaatg tctggcggct gacaagtcgg agacactggg
      481 caatcgtccg ctctatgttg caggtcgtgg tcttgtagca ggcgccgcta aaaccggcga
      541 tgcgccgggc aaagcggtac aactcgtttt ccgtcggtcc cgacacgatg aatgcgccct
      601 tcagaccgag cgcggggcag agctgcgcct gtgaagtcga cgaattcccg atgagccggg
      661 tcgaggggca tggctcggcg ccgacgcccg ggtcggcggc gaggcgatcg cgagcagcgt
      721 ctccgttagc ggttccacgg tttaccggac caaacgccgc ttcgtgcaag gcaatctcga
      781 acgcgcactc agcgaggggg cgcgaccggg agcaccccgc aagctatccg gcaaggagac
      841 ggcctcctgg tggcgaccgc gtgttccagc cctccggcgg ggtggaaacg gtggacgctc
      901 aacctgctgg cgggtgcgat gatagaactg accgaccatg acggtttgtc gcgcgagacg
      961 gtgcgcccgc gcgtgactga ggacaacctg aaaccctgac tccggaagat gcggacgtga
     1021 ctggcaccaa cgtcgcgcgg atggaggatg tcctcgatcg ttacgccgag gccccgatcc
     1081 caggataccc aagtggtttg cttcgacgag gtcccgaccc aactgatcgg caagatgcgc
     1141 gagccgatcc ccgggggcac ctccatgggc gagcttgacc acacccgcga aaccccgctg
     1201 cacaccgtaa aattcgccag tctgttcgct atcgacgtct acccggtcac cttcgacgaa
     1261 tgggacgccc cacccgccgt cggcgggtgg gggaggggac gacgccctgt catcaacgtc
     1321 acctgggacg acgctaagag ccacgcgatg tggctgtcac gcaaagccgg caaacactac
     1381 cgcctgctat ccgaagccga gtgggaaaag gccgcccagc cagcatacgc cctgtttccg
     1441 gtggggcgat gcgatggtgc cgggcgccgc cgactacgac ggctgcggca gcagctttga
     1501 cgacaccagg actgcgccgg tcgacagcct caagcccaat ctgtccggcc ttaacacacc
     1561 gtcggcaacg tcaccgagtg ggtcgaggac acaatgggca ctacgcctac gatggtgccc
     1621 caaagatgcc agtgccgggg ccggagaccc gaagcgggtc accatgcaca gcggatcatg
     1681 gtacaacggc cccgcccgca atcacgccag ctttcgcaac ggcgatagca acgccgtcaa
     1741 ctaccgcaag atcggcttcc gaatcgccct ctctctgtag ccgccggcca tccgtcacgg
     1801 cccgaagcct tggccggtta cgcatcaacg cgccgccgcc aaagccaaac gcgtgcgccc
     1861 agccatacga tcgatatatc tatagtacga ctgaacaaac gccgcaaaag ctgcatcatc
     1921 ccgccgaggc agctcgccac gcgccagcca ccacgaagcc ggccggcgat cggcgctaat
     1981 ccggtcatag tccgccgcga aatagcgaag gttatccgac agatcggtat accgccggtc
     2041 cgcctcgatc tgatcgaaat gccgctgaaa cgatcccgga atcgggctgt catagaaaat
     2101 taggctcaca tccgtatcgt acaacgcatt ctcccttcgg atcggcgtcg cggtggcgat
     2161 cgcccccggc ccggttggca gccagtcatc cc
//
LOCUS       DATAVD010000622         3636 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1921233, whole genome shotgun sequence.
ACCESSION   DATAVD010000622 DATAVD010000000
VERSION     DATAVD010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3636
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1921233"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..210
                     /locus_tag="VHX39_11640"
     CDS             <1..210
                     /locus_tag="VHX39_11640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014189588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEX3991811.1"
                     /translation="GLMIEQIEVVLGIIAESFSLRFPPGTLDEVVKLDELCMVASWMK
                     GLYKRPEFISEGFAANCRAANPACT"
     gene            446..1795
                     /locus_tag="VHX39_11645"
     CDS             446..1795
                     /locus_tag="VHX39_11645"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding protein"
                     /protein_id="HEX3991812.1"
                     /translation="MSKTNVLDTAAVQRRDLMRGGLGIAGALATGAALSHPALAAEAP
                     LGNYPAGTTGPSVFVGLCTPLTGTYAAAGTDERKGFELAIAHLNSGNELIRKISPLTK
                     TGVLGKKVEFDVADSEAKPNTAVQAQSRFISDKKAIMIAGSVSSAVAVAINKLAQREH
                     VIYLPLVTGSNDTSGKDCVRYSFRACHYAYTAAAAIAPELIKAFGKGKKVAYLTPDYT
                     YGHSVTGSMQEFLKPAGWTTITDQVCPLGAPDYSSFLLNIANSGAEVLINVNFGNDAV
                     GSIKQAKQFGILDKMKLVMPYLSPFLSKEVGADLMQGVYGTTEFWWTLGDKNPIAKAF
                     VDAFNAKYGYKPEWAAHVAYMQVALWADAVEHAKTFYPGDVIKSYESGRTMQTGLGPV
                     KWRAADHQLIRPVVVTRGKKPSAMKSPDDYFDVVALVPGEGLMQAPDAFACKLGSVT"
     gene            1830..2705
                     /locus_tag="VHX39_11650"
     CDS             1830..2705
                     /locus_tag="VHX39_11650"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3991813.1"
                     /translation="MLSWPNFISQLFNGLALGALLALISSGLTVIYGTLGVLNLAHGA
                     MFMMGGYGGFVTYQYTHSFALALVGGTLCVLVIGVVTEQVLIRHFYRRPPEDQLLVTF
                     GLGIVFVELVRLGFGSLSLQVSPPDWASGITRMGFLIYPTYRLYVMGIIAVALAALYV
                     VLYRTRIGMIVRAGIEDAGMVDMLGINVFRVFMLVFGIGAAAAGFAGIVNAPVVPLTP
                     DMGDQILVETFVVVVIGGVGSFPGAILGGLIAGEILSITSMFDPSYSQVMLFVVMTLV
                     LLFRPQGLLGQSSRT"
     gene            2702..>3636
                     /locus_tag="VHX39_11655"
     CDS             2702..>3636
                     /locus_tag="VHX39_11655"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3991814.1"
                     /translation="MTNRDTMTVWRAFLPDVLTACGLIAAPFILPSLGFAADTMNRIL
                     VLGLFGIGFDILFGFTGLLSFGQSAFFGTGGFMAAYLTINGLITNVMLALVIGTIAGA
                     VTGVLVGLIALRRTGIYFAMITVAIAETFFFVENSPLSAFTGGENGLSGVPSPVFNLG
                     FVTWRVGTGFSMYTFLAICFLVGIVIARRIVHSPVGAVFMAIRDNPIRARAVGHAVER
                     YKLLAFTIAAAYAGFAGGLLGVLQGYMPPDAFTFDTSGELIMQTMIGGPGMLFGPLAG
                     AAVWLYLRDFLQSGLGLGAAWKLVLGIIFVLLVCFL"
BASE COUNT          618 a         1118 c         1137 g          763 t
ORIGIN      
        1 ggcctgatga tcgagcagat cgaggttgtg ctggggatca tcgccgagag cttctcgctt
       61 cgctttccac ccggaacgct cgacgaggtg gtgaagctgg acgaactctg catggtggca
      121 agctggatga agggtctcta caagcggccg gaattcatat ccgaggggtt cgcggcaaat
      181 tgccgggcgg ccaatcccgc ctgcacctga agtctcatca gcaaaaccgg atactcggcc
      241 cgctaaccgc ccaatggtcg gccagacagc gggcatctcc tttgtcccgc ccctaaacag
      301 aggaaactta tcgcgaattt acatcccgct gcgaggccgg ggtttatctt cgcctgttgc
      361 aacaagtcac gtttgtttgt acatgaatca agcgcaccct gcgtcatcgc cgggtagcca
      421 ataatagatc agggagtgtt ggctaatgag caaaacgaac gtcctcgaca cggcagcggt
      481 acagcgccgc gacctgatgc gcggcggcct cgggatcgcc ggcgccctgg cgaccggtgc
      541 tgccctgtct catccggcgc ttgccgccga agcaccgctg ggcaattacc cggccggcac
      601 caccggccca tcggttttcg tcggcctttg cacgcctctt accggaacct acgccgccgc
      661 cggcacggat gagcgcaaag gcttcgaact ggccatcgcc cacctgaaca gcggaaacga
      721 actgatccgt aagatttcgc cgctgaccaa aaccggagtc ctcggcaaga aggtcgagtt
      781 cgacgtcgcc gactccgagg cgaagccgaa taccgccgta caggcacagt cacgcttcat
      841 cagcgataag aaggcgatca tgatcgccgg gtctgtcagc agtgctgtcg cggtcgcgat
      901 caacaagttg gcgcagcggg agcatgtgat ctacctgccg ctggtcaccg gatccaacga
      961 caccagcggg aaggattgcg tgcgatactc cttccgagcg tgtcattatg cctatacggc
     1021 ggcggcggcc atcgcaccgg aactgatcaa ggccttcggc aagggcaaaa aggtcgccta
     1081 tctgacgccg gactacacat atggccactc ggtgaccggt tcgatgcagg aattcctgaa
     1141 accggccggc tggaccacca tcaccgatca ggtctgcccg cttggcgcgc cggactacag
     1201 ttcgttcctg ctgaatatcg ccaacagcgg tgccgaggtg ctgatcaacg tcaacttcgg
     1261 caacgatgcc gtcgggtcga tcaagcaggc gaagcagttc ggcatcctcg ataagatgaa
     1321 gctcgtgatg ccatacctgt cgccgttcct cagcaaggag gtcggcgccg acctgatgca
     1381 gggcgtttac ggcaccaccg agttctggtg gaccctgggc gacaagaatc cgatcgccaa
     1441 ggcgttcgtc gacgcgttca acgccaagta tggctacaag ccggaatggg cggcgcatgt
     1501 cgcctatatg caggtggctc tgtgggcgga cgcggtggag cacgccaaga cgttctatcc
     1561 gggcgacgtc atcaagtcct atgaatccgg gcgcaccatg cagaccggcc tggggccggt
     1621 aaagtggcgc gcggcggatc atcagcttat ccgtccggtg gtcgtcaccc gtggcaaaaa
     1681 gccgtcggcg atgaaatcgc cggacgatta cttcgacgtc gtcgcactgg tgccggggga
     1741 agggctgatg caggcgccgg atgcgttcgc ctgcaagctt ggttcggtaa cctgacatcg
     1801 atggacatcc actccatgcg cgacacgaca tgttgagctg gccgaacttc atttctcaac
     1861 tgttcaacgg gttggcgctg ggcgcccttc tcgcactgat cagttcagga ctgaccgtca
     1921 tctacggcac gctcggggtg ctcaatctcg cgcatggtgc gatgttcatg atgggtggct
     1981 atggcggttt cgttacctat cagtacaccc actccttcgc cctcgcgctg gtcggcggca
     2041 cgctgtgcgt gctggtgatc ggcgtggtga cggagcaggt gctgatccgt cacttctatc
     2101 gccgcccgcc ggaggatcag ttgctggtca ccttcggact aggcatcgtc ttcgtcgagc
     2161 tggtacggct tggcttcggc agcctgtcgc tgcaggtctc gccgcccgac tgggccagcg
     2221 gcatcacccg gatgggattc ctgatctacc ccacctaccg actctacgtg atgggcatca
     2281 tcgccgtcgc gctggcagcg ctgtacgtgg tactgtatcg aacccgtatc ggcatgatcg
     2341 tgcgcgccgg catcgaggat gccggcatgg tcgacatgct gggcatcaac gtcttccggg
     2401 tgttcatgct ggtgttcgga atcggcgccg cggccgccgg ttttgccggc atcgtcaatg
     2461 cgccggtggt gccgctgacg cccgacatgg gtgaccagat tctggtggaa accttcgttg
     2521 tcgtggtgat cggcggcgtc gggtcgtttc ccggcgccat cctgggcggc ctgatcgccg
     2581 gtgagatcct cagcatcacc tcgatgttcg acccaagcta ctcgcaggtc atgctgttcg
     2641 tggtgatgac actggtgctg ttgtttcgac cgcaaggatt gctggggcag tcgtcacgca
     2701 catgacaaac cgggacacga tgactgtctg gcgggccttc ctgccggatg tgttgaccgc
     2761 ttgcgggctg atcgccgccc cgttcatcct gccctcgctg gggtttgccg ccgatacgat
     2821 gaaccgcatc ctggtgctgg gactgttcgg catcggcttc gacatcctgt tcggcttcac
     2881 cggcctgttg tcgttcggac aatcggcgtt cttcggcacc ggcggcttca tggccgccta
     2941 tttgaccatc aacgggctga tcaccaacgt catgctggcg ctggtgatcg gcaccatcgc
     3001 cggggcggtg accggcgtgc tggtcggact gatcgcgctg cgccgcactg gcatctattt
     3061 cgccatgatc acggtggcga tcgccgagac gttcttcttc gtcgagaatt cgccgctgtc
     3121 cgcctttacc ggtggggaga atgggctatc cggcgtgccg agcccggttt tcaacctggg
     3181 tttcgtgacg tggcgggtgg gcaccgggtt ttcgatgtac accttcctgg cgatctgctt
     3241 cctggtcggc atcgtcatcg ccaggcgcat cgtccactcg ccggtcggtg ccgtcttcat
     3301 ggcgatccgc gacaacccga tccgggcacg cgccgtgggc catgcggtgg agcgctataa
     3361 gctgctggcg ttcaccatcg ccgccgccta tgccgggttc gccggagggc tgctgggggt
     3421 gctgcaaggc tacatgccgc cggatgcatt taccttcgac acctccggcg aactgatcat
     3481 gcagaccatg atcggcggcc ccgggatgct gttcggtccg ctggcgggcg ccgccgtgtg
     3541 gctgtacctg cgtgacttcc tgcagtcggg ccttggcctg ggtgctgcct ggaagctggt
     3601 gctgggtatt atcttcgtcc tgctggtttg cttcct
//
LOCUS       DATAVD010000623         1725 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_616512, whole genome shotgun sequence.
ACCESSION   DATAVD010000623 DATAVD010000000
VERSION     DATAVD010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_616512"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..743
                     /locus_tag="VHX39_11660"
     CDS             <1..743
                     /locus_tag="VHX39_11660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991815.1"
                     /translation="KGHKINFDNWTLHLHEEDFSESMDLARQHPAKLQELVEAFDAAA
                     WDNMVYPLDNRSPAQKFNELAPHQRPPLAGRRRFLPNGQTVHRSVVVPLIADRAFSFV
                     VSFRHDAADAGVLFAVGDVTGGMVLIVEDGKLRFIYNGFGEFSEIPGPSVSAGERVAT
                     LEYEALGKRRGRGRLQLDTGEVSDWQDLSPTLRYGFHEGLDIGLDRRGPVSWDLQRRH
                     GVFRYSGTIHELIVESGPFAPDSAFTKG"
     gene            complement(845..1558)
                     /gene="hisG"
                     /locus_tag="VHX39_11665"
     CDS             complement(845..1558)
                     /gene="hisG"
                     /locus_tag="VHX39_11665"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019090880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEX3991816.1"
                     /translation="MDDVVTANFPAASLEPETSGPLILALPKGRILEECGPLLARAGI
                     VPSADYIDESSRRLRFETSDPALDVVRVRSFDVATFVAFGAAQIGICGADVLLEFDYP
                     EIYAPLDLGIGKCRISVAEPRETAGTDDPARWSQIRVATKYPNIARRHYASRGIQAEV
                     VHLNGAMELAPGLGLSRLIVDLVQTGSTLRANGLVETEVIAQVTSRLIVNRTALKTRP
                     EVIGGFIARLRAALDDTAK"
     gene            complement(1596..>1725)
                     /locus_tag="VHX39_11670"
     CDS             complement(1596..>1725)
                     /locus_tag="VHX39_11670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003620195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEX3991817.1"
                     /translation="TTRLLADPAMIDAMLRDGARRAAAIADPIVAKAENLVGFLRV"
BASE COUNT          322 a          534 c          543 g          326 t
ORIGIN      
        1 tgaaagggca caaaatcaac ttcgacaact ggacactgca tctccacgag gaggattttt
       61 ccgaaagtat ggatctcgcg cgccagcatc ccgccaaatt gcaagagttg gtcgaggcgt
      121 tcgatgcggc ggcgtgggac aatatggttt atcctctcga caatcggtcg ccggcacaga
      181 agttcaacga gcttgcgccg catcagcgtc cgcccctggc tggccggcgg cgttttcttc
      241 ccaatggcca gaccgtgcat cgcagcgtgg tggtgccgct gatcgcggat cgggcgttct
      301 cgtttgtcgt gtcattccgt cacgatgcgg ccgacgcggg tgtgctgttt gcggttggcg
      361 acgtgactgg cggcatggtg ctgatcgtgg aggacggcaa gctccggttc atttacaatg
      421 ggttcggtga attctccgaa atccccggac cgtcggtgtc ggccggggag cgggtggcaa
      481 cattggaata cgaggcactc ggcaagcgcc gaggccgtgg ccggctgcag ctcgacacgg
      541 gtgaagtcag cgattggcag gaccttagtc cgacgctgcg gtacggcttc catgaagggc
      601 tcgacattgg tctcgatcgg cgcggcccgg tcagttggga cctgcagcgc cggcacgggg
      661 tatttcgtta cagtggcacc atccatgaac tgatcgtgga aagcgggcct tttgcaccgg
      721 attccgcttt cacgaaagga tgaggcaagg caggcggttt cgtccgccgg gcgcagttca
      781 gtggtttgcg ggcgtggcgg cgcacgcgcg acgagggtta aacccgactg gccatcaaat
      841 tcgattactt cgccgtatcg tccagcgccg cccgcaatcg cgcgataaac ccgccgatca
      901 cctccggccg cgtcttcagc gcggttcggt tcacgatcag ccggctggtc acctgagcga
      961 tcacctcggt ctccaccagc ccgttcgccc gcagcgtgga gccggtctgc accaaatcga
     1021 cgatcagccg cgacagcccg aggccaggtg ccaactccat cgcgccgttc agatgcacga
     1081 cttcggcctg aatgccgcgg ctggcataat gccggcgtgc gatattggga tatttggtcg
     1141 ccacccggat ttgcgaccaa cgcgccggat cgtcggtgcc cgcggtctct cgcggctcgg
     1201 cgaccgagat gcggcatttg ccgatgccca gatcgagcgg ggcataaatc tcgggatagt
     1261 cgaattccag cagcacgtcg gcgccgcaga tgccgatctg ggctgcaccg aacgccacaa
     1321 aagtggcaac gtcgaacgag cgaacccgca ccacgtccaa cgccggatcg gaggtttcga
     1381 aacgcagccg gcggctgctc tcgtcgatat agtcggctga cggaacgatg ccggcacggg
     1441 ccagcagagg tccgcattcc tccaggatcc ttcccttggg taaggccagg atcagtggcc
     1501 cagaggtctc cggttccagc gaggcggcag gaaaattcgc agtcacaaca tcatccattc
     1561 caacccatcc tgggctttcg tccgctcatg ttgcgtcaga cccgcagaaa tcccaccaga
     1621 ttctcggcct tcgcgacaat cggatccgca atcgctgccg cccgacgagc gccatcgcgc
     1681 aacatggcat cgatcatggc gggatcggcc agcaggcgcg tggtt
//
LOCUS       DATAVD010000624         3652 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1174426, whole genome shotgun sequence.
ACCESSION   DATAVD010000624 DATAVD010000000
VERSION     DATAVD010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3652
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1174426"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            234..1181
                     /locus_tag="VHX39_11675"
     CDS             234..1181
                     /locus_tag="VHX39_11675"
                     /inference="COORDINATES: protein motif:HMM:NF014114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEX3991818.1"
                     /translation="MTSASSDTALLPRCLRPGDRVRLVSPASTPSEDGVHRCVSTFES
                     WGLRVELGKHVFSRLGYLAGTDEERVTDVNEALRDEGIRAIFATTVGKGSYRIADRLD
                     FKAAAANPKFVVGFSDITALHLALYRACRLVGVHGPLSSWSAEFIGPASVDALRKALT
                     TTDPIDIHPDPGEPTRALTTRGHAVGRLIGGNLDTLAICAGWALPSLDGSILFIEAAD
                     MGLGHVDRQLTMLTKAGHLKGIRGIAVGQFVNYKTGDHGWSVLDVLRDHFGRIGVPIL
                     GGLPIGHGKNPKTIPIGTQAMLDADAGKLHVAAGSRSSD"
     gene            1404..2870
                     /locus_tag="VHX39_11680"
     CDS             1404..2870
                     /locus_tag="VHX39_11680"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX3991819.1"
                     /translation="MDILATQNTADDLAFRVALRQSEIRYRRLFEAAHDGVLILDSVS
                     RKITDANPFMSRLLGYRHEELLGKELWEIGLLKDEQASQAAFRELQNSGQVRYEDLPL
                     ESKTGEQREVEIVANRYDEDGKQVVQCNVRDITERKKTEDALRSSEERFRTLFELGPS
                     AVYSCDVRGVIRDFNQRATELWGRTPARGDDSERFCGSIKMFRPDGSFMSHDQCPMAW
                     VVSGKISEVNDEEVILERPDGSRVTAVVNIRPLKNEHGEITGAINCAYDITERKHVEE
                     HQRFLMDELAHRGGNLLAVIQSIVSRSLAGTKPLAEERNTLMRRLQALARSQSALMSK
                     GFQGAPLAEIIRLEFEGFSDRVMAKGPDVMLNSRTAQTFALLLHELATNASKYGALSL
                     PDKGHVDIHWSIDGEAAEARLKFHWQERDGPPVVVPTRTGFGSLLLERLASQDFGAQP
                     KITFAPGGLSYSINAFLPTMTAGNERTNLLRSSDYSRS"
     gene            3164..3517
                     /locus_tag="VHX39_11685"
     CDS             3164..3517
                     /locus_tag="VHX39_11685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991820.1"
                     /translation="MNLRRLLNLAFAVLVTAGLTLAPMAAPATAGTTHESGMTGMSMS
                     ADMPCCPDKQKSKDCQDCPLVAMCVLKTAQAGPSATEALPLRPAIRTTHAVRNDIPAD
                     GLDRPPPDHPPRNLA"
BASE COUNT          774 a         1082 c         1083 g          713 t
ORIGIN      
        1 cgtcgtcgcg acaattgggc aacgtgattt cctcggtaca cttcccgtct tgtccaatca
       61 accgagccac gtactcaacc atggttgcag tcgataagag atgcacgcgg tctcgtcaac
      121 tccccctggt atgcctggag cgcgacaatc tcccgtgtta atatcaaact tcatttcagt
      181 aatccgcaaa aagtttaccg ccttgtgttg gccgacaatc cgaggccgta aagatgacct
      241 cagcctcaag cgatacagct cttttgcctc ggtgcctgag gcccggcgat cgtgttcgcc
      301 tggtatctcc cgccagcaca ccaagtgagg acggcgtaca ccgctgtgtc agcaccttcg
      361 agagttgggg gctgcgtgtc gaactgggaa agcacgtgtt ttccaggctc ggttatctcg
      421 ccgggaccga cgaagaacgc gttaccgacg tgaacgaagc gctgcgcgac gagggtattc
      481 gcgcgatttt tgcgacgaca gtcggcaaag gctcctatcg gattgctgac aggctcgatt
      541 tcaaggctgc cgccgcaaat ccgaaattcg tcgtcggctt cagcgacatc acagccctgc
      601 atcttgcact atatcgtgcg tgccgcctgg tcggcgtaca tggaccgctt tcaagctgga
      661 gcgcggagtt tattggtccc gcttccgttg acgcgctacg aaaagcgctc acgacgacag
      721 acccgatcga cattcatccc gatccgggtg agccaacgcg tgcactgacg accagaggcc
      781 acgccgttgg acggttgatt ggcggaaatc tcgacaccct cgcgatctgt gccggatggg
      841 cgctcccaag tctcgatgga agcattttat tcatagaggc cgccgacatg gggcttgggc
      901 acgtcgaccg tcaattgacg atgctaacca aggccgggca tctcaaaggt atccggggga
      961 tcgcggtcgg ccagtttgtc aactacaaga ccggcgatca cggatggtcg gtattggacg
     1021 tgctgcgcga tcattttggc cgcatcggcg ttccgatatt aggcggccta ccgattgggc
     1081 acggcaagaa ccccaaaacc atcccgattg gcacgcaggc gatgctcgat gcagacgcgg
     1141 gcaagctgca cgtggcggca ggctcacggt ccagcgattg agctacgcga acgatatttg
     1201 ctgattgtgt gtgggcaact gcggccgaga caagtcggtt tgtggcccga agctgcccgt
     1261 aatgcacggg cagagcacct ccgccctgcc aggcacggcg actgaaagga cttagtgaca
     1321 aaatatatgt ccgggtccgg acacattttt ggaaccaagg accatggcct cacttcacct
     1381 accaccggat ccgaaccaac taaatggata tcttggccac ccagaacaca gccgacgacc
     1441 tcgctttccg ggttgcgctc cgccaatcag aaatccgata tcgccggctt ttcgaggccg
     1501 cccatgacgg cgtgctgatc ctcgactccg tcagccgaaa aatcaccgac gccaatcctt
     1561 tcatgtcccg tctgctcggc tatcgacacg aagagttgct gggcaaggag ctttgggaaa
     1621 tcggcctgct caaggacgag caggcaagcc aggccgcgtt tcgagagttg cagaacagcg
     1681 gccaggtccg ttacgaagat ttgccgctgg aatccaaaac cggtgagcag cgggaagtgg
     1741 agatcgtggc caatcgctac gatgaggacg gtaagcaggt cgttcagtgc aatgtgcggg
     1801 acattaccga gcgaaagaag accgaagatg cgttgcgttc gagcgaagaa cgctttcgca
     1861 ctctgtttga actgggtccc tcggccgtct attcctgcga tgtccgtggc gtcattcggg
     1921 acttcaacca acgtgctacg gaattgtggg gccgtactcc ggcgcgcggc gacgacagcg
     1981 aacgtttctg cggctcgatc aagatgttcc gtccggacgg aagtttcatg tcccacgacc
     2041 agtgcccgat ggcgtgggtg gtctccggaa aaatatcgga ggtcaatgac gaggaagtaa
     2101 tcctcgagcg cccggacggg tcgcgggtga ccgccgtcgt aaatatccga cctcttaaaa
     2161 atgagcacgg agaaatcacg ggcgcgatca actgtgccta tgacattacc gaacggaagc
     2221 acgtcgaaga gcaccagcgg ttcctgatgg acgaactcgc gcatcggggg ggaaatctgc
     2281 tggccgtgat ccaatccatc gtttcccgca gcctggccgg aacgaagccg ctcgccgagg
     2341 agcgcaacac gcttatgcga cggctgcagg cgcttgcacg cagccaatcg gcgctgatga
     2401 gcaagggatt ccagggcgca cctctggccg agatcatccg gctggagttc gagggatttt
     2461 ccgaccgggt gatggccaaa ggtccggatg tgatgctgaa ctccaggacg gcgcagacct
     2521 ttgcgctgct gcttcacgaa ctcgctacca acgcaagcaa atacggcgcc ctttcgctac
     2581 cggacaaggg ccatgtcgat attcactggt caatcgacgg ggaagctgcg gaagccagat
     2641 tgaagtttca ctggcaggag cgcgatggac cgccggtcgt ggttccgacc cgcacaggtt
     2701 tcggcagcct gttgctcgaa aggcttgcct cacaggattt tggagcgcaa ccaaaaatca
     2761 cgtttgcacc cggcggattg agctattcga ttaacgcttt cctgccaacc atgacagccg
     2821 ggaatgagag aacgaacctg ctgcgttcga gtgattactc acgatcgtga agggaagagc
     2881 ttccgtcttt caggaataca tcagtctgag attggcccga agctgcccgt aatgcacggg
     2941 cagagcacct ccgccctgcc cggcatcagg acaccgagga aaggcagcag ttgcgttctg
     3001 gctccgatgc cgcctcccga cgggctgttg accggaaatg acatccgtcc gctatcttcg
     3061 aggccttggt cagcttgacc gttccgagcg atttggctgt gactggcgaa catgtgaagg
     3121 tggcgggctt ccaaagttcc ccatcgcgtg ggatgatcca cccatgaatc tgcggcgatt
     3181 gcttaatctc gctttcgcgg tcctggtgac cgccggtctg acgttggcgc ccatggctgc
     3241 gccagcgaca gcagggacta cgcatgagag cggcatgact ggcatgtcga tgtcggccga
     3301 catgccgtgc tgcccggaca agcagaagag caaggattgc caggactgcc cgctggttgc
     3361 gatgtgcgtc ctgaagaccg cccaggccgg cccgtccgcc accgaagcgc tgccgttgcg
     3421 gcccgcgatc cggacgacgc acgcggttcg taacgatatt cccgccgacg ggctcgaccg
     3481 tccgccaccc gaccatcccc ctcgaaacct ggcctgacca gcgcctagcc gccggtcgct
     3541 gccgcacgcc ttcgggcgcg cggacgacgc atgccgtctt gcgacggatc caggacaatc
     3601 gaggatttta gagaaatgaa aacgttcact ctgacgcgcg ccatccaggc gg
//
LOCUS       DATAVD010000625         3204 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1359850, whole genome shotgun sequence.
ACCESSION   DATAVD010000625 DATAVD010000000
VERSION     DATAVD010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3204
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1359850"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1045)
                     /locus_tag="VHX39_11690"
     CDS             complement(<1..1045)
                     /locus_tag="VHX39_11690"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3991821.1"
                     /translation="MAIAIRSLCKAASAAWDAFVDAHPDGTFFHLAAWAQIIERAFGH
                     RTFYVYAERDGAITGVLPLAQVKTMLFGNTLISVPFCVYGGPLAVDLETEAALSAHAS
                     SLLERSGASAVEFRFRGPVGGMNSGTLAMAATLDASWAAAGECATTVIADRPVHSQIE
                     MNSDSTEGGWVTRPDLYVTFRKPIEADHDKNLKSIPRKQRAMVRKGIQNGLRSFTGRD
                     VRQLHGVYAESVRNLGTPVFSRRYLAMLADVFGRDCDILTVLDGDNPIASVMNFYFRD
                     EVLPYYGGGTAFARQRAANDFMYWEVMRRAADRGCRLFDFGRSKLSTGAFDFKKNWGF
                     APEHLCYRYKLAPG"
     gene            complement(1062..2006)
                     /locus_tag="VHX39_11695"
     CDS             complement(1062..2006)
                     /locus_tag="VHX39_11695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XrtA system polysaccharide deacetylase"
                     /protein_id="HEX3991822.1"
                     /translation="MSLAKELPVRSAMPVLNAMPVLNAMTVDVEDYFQVQAFAHRVDR
                     ASWDDFPGRVEANVDRILDQFGRANVHATFFTLGWIASRHPAMVRRIVAEGHELASHG
                     WDHTRADCQDQDTFRQDVQRTRLLLEDIGGVAVTGYRAATFSIGAGNLWAFGILRGAG
                     YRYSSSVNPIAHDLYGMPDAPREPFQPDGDGFWEIPLTTVRALGRNWPCSGGGYFRLL
                     PSTMYRAGLTRVNRTEGRPGIFYFHPWEIDPDQPRIAGVGWKSRLRHYTNLSRMTARL
                     DQVLARFAWDRMDHVFADLMPATLPELTTGPDASPVAA"
     gene            complement(2003..3058)
                     /locus_tag="VHX39_11700"
     CDS             complement(2003..3058)
                     /locus_tag="VHX39_11700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="XrtA/PEP-CTERM system-associated ATPase"
                     /protein_id="HEX3991823.1"
                     /translation="MYEKFYGLDGSPFLLTPDPRFFFSSSNHRRAITHLVYGLDQREG
                     FIVITGEVGAGKTMLVEQLWHQLSRNSYAVSKVVTTQVSGDDLLRLVMDGFGLSILPG
                     TEKSVLLRRFENMVREQRNVGRRCVLVVDEVQNLSFAALEELRMLSNITVDGKASVQT
                     ILLGQPQFRPTLASRDAEQLRQRVLASFHLGPLSEVETRLYIEHRLKTVGWSDNPHWD
                     EDAFAAVHRHTDGTPRRINTLCSRVLQFGALDERSEITAAMVDEVANEMAEGMNGSDA
                     PAQDVNGVQRVNPMSPDEIAANDTPDVYSAYRAPASGELGDLLHRIEALEEVTARQDR
                     VFQRILKMLALAVAKEP"
BASE COUNT          672 a         1002 c          943 g          587 t
ORIGIN      
        1 ctcccggcgc gagcttgtaa cggtagcaca ggtgctccgg cgcgaagccc cagttctttt
       61 tgaagtcgaa agcgcctgtg ctgagcttgc tgcgtccgaa gtcgaacaaa cggcaaccgc
      121 ggtcggcggc acggcgcatc acctcccagt acatgaaatc gttggcagcg cgctgacggg
      181 cgaatgcggt gccgccgccg taatacggca acacttcatc gcggaagtaa aagttcataa
      241 ccgacgcgat cggattgtcg ccgtccagca cggtcaggat atcgcagtcg cgtccgaaca
      301 cgtcggcgag cattgcaaga taacggcggg aaaacacagg ggtgccaaga ttgcgcacgc
      361 tctcggcata aacgccgtgc agttgtcgca cgtcgcgccc ggtgaaagag cggaggccgt
      421 tctggatgcc tttgcgcacc atcgcgcgct gtttgcgcgg gatggatttc aggtttttgt
      481 cgtggtcggc ctcaatcggc ttccggaatg ttacgtaaag gtcgggccgg gtcacccagc
      541 cgccttcggt gctgtcgcta ttcatctcga tctgcgaatg gactggccgg tcggcgataa
      601 cggtcgttgc gcactcaccc gctgccgccc atgatgcgtc caacgttgcc gccatggcca
      661 aggttccgct attcatccca ccaactggac cgcgaaaacg gaactccacc gcgctggcac
      721 cggagcgctc cagcaacgaa gacgcatgcg ccgacaatgc agcctcagtc tccagatcca
      781 ctgcgagcgg accgccatac acacagaacg gaaccgaaat caaagtgttg ccaaacagca
      841 tcgtcttgac ctgcgccaat ggcagcacgc cggtgatcgc accatcccgc tcggcgtaga
      901 cataaaatgt gcggtggcca aacgcccgct cgatgatttg tgcccaggct gcgaggtgga
      961 agaatgtgcc gtcgggatgg gcgtcgacga atgcatccca cgccgcagag gcagccttgc
     1021 acagggaacg gatggcgatc gccatgcgga attccgcttg ctcaggcggc gacgggtgaa
     1081 gcgtcaggtc cggtcgtcaa ctccggtagc gtcgcgggca tcaggtcggc gaacacgtgg
     1141 tccattcggt cccaggcaaa cctggccaaa acctgatcga gacgcgctgt catgcgggac
     1201 aaattggtgt agtggcgcag ccgcgacttc cagccgaccc cggcaattct cggctggtcc
     1261 gggtcgattt cccagggatg aaaatagaag atccccggcc ggccctcggt tcggttaacc
     1321 cgcgtcaggc cggcccggta catcgtactg ggcaacagcc ggaaataccc accaccggaa
     1381 cacggccagt tgcggcccaa cgcccgcacc gtggtcaggg gaatttccca gaacccgtcg
     1441 ccatccggct gaaacggctc acgtggggca tccggcatgc cataaagatc gtgggcgatt
     1501 gggttgacgc tggagctgta gcgatacccg gcaccccgca ggatgccgaa cgcccaaaga
     1561 ttgccggcac cgatcgagaa ggtcgcggcg cgatagccgg tcaccgcaac accgccgata
     1621 tcctctagca acaatcgcgt ccgttgcacg tcctgacgga acgtatcctg gtcctggcaa
     1681 tcggcccgcg tgtgatccca gccatggctc gcaagttcgt gtccttccgc cacgatgcgg
     1741 cgcaccatcg ccggatgccg actggcgatc caacccaggg tgaagaacgt cgcatgcacg
     1801 ttggcacgcc caaattgatc gaggatgcgg tcgacgttgg cctcgacccg tcccgggaaa
     1861 tcgtcccagc ttgcccggtc cacacgatga gcgaatgcct ggacctggaa gtagtcctcg
     1921 acatcgacgg tcatggcatt aagaaccggc atcgcattga gcacgggcat ggcactccgc
     1981 accggtaact ccttcgccag gctcatggct ctttcgccac tgccagcgca agcattttga
     2041 ggatccgctg gaagacccga tcctgccgtg cggtcacttc ctccaaggct tcaattcggt
     2101 gcagcagatc gccgagctcg ccggaagcgg gggcgcgata cgcggaatag acgtctggcg
     2161 tatcgttggc agcgatctca tccgggctca ttggattgac ccgttggaca ccgttgacgt
     2221 cctgcgcagg cgcgtcggaa ccgttcatgc cttcggccat ttcattggcc acttcgtcca
     2281 ccatcgcggc ggtgatttcg cttcgctcat cgagcgcgcc aaactgtaat acgcgggaac
     2341 acaaggtatt gatccgccgc ggcgttccgt cggtgtggcg atgcacagcc gcgaatgcat
     2401 cctcatccca gtgcggatta tcggaccagc cgacagtttt caggcgatgc tcgatgtaaa
     2461 gccgagtctc cacctccgac agcgggccaa gatggaatga ggccagcacg cgctggcgca
     2521 gctgctcggc gtcccggctg gccaaagtgg gccggaactg cggttggccc agaagaatgg
     2581 tctgcaccga ggccttgcca tcgaccgtga tgttcgagag cattcgcagc tcctccaacg
     2641 ccgcgaacga caggttctgc acctcatcga ccaccagcac gcagcgccga ccgacgttgc
     2701 gctgttcccg caccatgttc tcaaaccggc gcaacaggac cgatttctcg gtcccgggca
     2761 gaatgctcag gccaaagcca tccatcacca ggcgtagcag atcgtcgccg gatacctgcg
     2821 tggtcactac cttgctcacg gcataggaat tccggctgag ctggtgccaa agctgctcaa
     2881 ccaacattgt tttgccggca ccaacctcac cggtgatgac gataaagccc tcgcgctggt
     2941 ccagcccata gacaaggtgg gtgattgccc tgcgatgatt gctcgagctg aaaaaaaagc
     3001 gcggatccgg cgtcagcagg aaaggagagc cgtccaggcc atagaacttt tcgtacacga
     3061 taccttcaga aggttttggt gaatcctacg agcaggatat tctcgtacaa attataacct
     3121 gttatcttcg aagtccgatc ataaaaagcg taccgtccgg tcagtgatgc tgaggcagac
     3181 agcatgtact gaagcgcgac cgag
//
LOCUS       DATAVD010000626         3443 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2479368, whole genome shotgun sequence.
ACCESSION   DATAVD010000626 DATAVD010000000
VERSION     DATAVD010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3443
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2479368"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..200)
                     /locus_tag="VHX39_11705"
     CDS             complement(<1..200)
                     /locus_tag="VHX39_11705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991824.1"
                     /translation="MMRLTAVIAQFTTLGLTDLGEPELTAWVERGWIRPDQSGADPVF
                     HDIDIARIRLIHDLRTLMQIED"
     gene            complement(197..1108)
                     /locus_tag="VHX39_11710"
     CDS             complement(197..1108)
                     /locus_tag="VHX39_11710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ C-terminal domain-containing protein"
                     /protein_id="HEX3991825.1"
                     /translation="MRDPYEILGLTRDADEAAIKAAYRKLAKKHHPDLHPGDKKAAER
                     FSELNNANDLLSDPEKRARFDRGEIDAEGHEVPPRGGFYRDFHGGPGGERYSSGSQGD
                     SAGFTEDDIAEFFARQFNARHGGGTFRAPGADLNYSLTLGFLDAANGTSRRVLMPDGR
                     ALDVKIPAGIEDGHTIRLKGQGRPGIGGGATGDALIEVTVAPHPFLRRVGDDVIITLP
                     VTLQEAVLGASVSVPTIKGTVKLTIPPGSGDGTRLRLRGRGIRAGHQFVELKVAMPPG
                     DEPALAEFLRGWKPAHSFDPRKGMEEA"
     gene            complement(1142..1924)
                     /locus_tag="VHX39_11715"
     CDS             complement(1142..1924)
                     /locus_tag="VHX39_11715"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX3991826.1"
                     /translation="MTKAPPLLRDDQDGIATLTLNRPQSRNALSIGLMEALDAELLSI
                     AADRAVHVVVIAAAGPAFCAGHDMREMRATPTREAYEAVFALCSRLMQRIIKLPKPVI
                     ARVHGAASAAGCQLVATCDLAIAGASARFATPGVDIGLFCSTPMVALSRAVSRKAAME
                     MLLTGELIDAQRAREFGLVNRVVPDAELETAVTALARQIAGKSPLTLAIGKTAFYRQA
                     DLDLASAYAMTAEVMTRNMLAHDAEEGIDAFLEKRPAVWTGT"
     gene            complement(1965..3050)
                     /locus_tag="VHX39_11720"
     CDS             complement(1965..3050)
                     /locus_tag="VHX39_11720"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent alcohol dehydrogenase"
                     /protein_id="HEX3991827.1"
                     /translation="MHITAAVFREVHQPLTIETIEIDEPRGREVLVRTVATGVCHSDL
                     HIVDGLGRFNLDRPFVLGHEGSGVVEAVGDDVTAVRKGDHVVACLSGFCGNCPQCLSG
                     HPNVCTGGIVGRENRLSQNGQLFQQFANIGSYASHMLLHENSLVRIDPDLPLDRAALV
                     GCGVLTGVGAALRSSGLQAGQTVAVFGCGGVGLSIVQGARIGGARQIIAVDQFESKLE
                     MAKAVGATHTVNSTQDDAVKAVRALSKGLGVDHAFEAVGLAVLCRQAIESLAVRGTAT
                     IVGVLPPDARIEFPWLAIRPECKVQTSRMGSNQFRTDIPNYLEFYRQGRLDLDSMISR
                     RGVLGDINDAFRAMKAGEVARSVLLFD"
     gene            3192..>3443
                     /locus_tag="VHX39_11725"
     CDS             3192..>3443
                     /locus_tag="VHX39_11725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6516 family protein"
                     /protein_id="HEX3991828.1"
                     /translation="MPATLILHRRRVFDDGGLIEMKLWQVPNPVRGSKHEFRYSLFYG
                     REGRRLVGYDNEAGKGDHRHYGAIEEAYFLTTPERLIADF"
BASE COUNT          638 a         1058 c         1118 g          629 t
ORIGIN      
        1 tcatcctcga tctgcatcag cgtgcgcaga tcgtggatca gccggatgcg ggcgatatcg
       61 atgtcatgga acaccggatc ggccccgctt tggtcgggac ggatccaacc gcgttcaacc
      121 catgccgtca gttccggctc gcccagatcg gtaaggccca gagtggtgaa ctgagcaatg
      181 actgcggtga ggcgcatcat gcttcctcca tacccttgcg gggatcgaac gaatgcgcag
      241 gtttccagcc gcgcaggaat tcggccaaag ccggttcatc ccccggcggc atggcgactt
      301 tcaattcgac gaactggtgg cccgcccgga tgccgcggcc gcgcaggcga agccgcgtgc
      361 cgtctccgga acccggcggg atcgtcagct tcaccgtacc tttgatcgtc gggaccgaaa
      421 cggaagcgcc aagcactgcc tcctgcaagg tcaccggcaa agtgatgatg acatcatcgc
      481 caacgcggcg gaggaaagga tgcggggcaa ccgtgacctc gatcagcgcg tcgcctgtcg
      541 cgccgccgcc aatccctggg cggccctgac ctttcaaccg gatggtgtgg ccatcttcaa
      601 tgccggccgg gattttcacg tcgagtgcgc gcccgtccgg catcagaacg cgacgggacg
      661 tgccatttgc ggcgtccaaa aagcccaggg tgagggagta attcaggtcg gcaccgggag
      721 cgcgaaacgt gccgccgcca tggcgggcgt tgaactggcg cgcaaagaat tcggcgatgt
      781 cgtcctcggt gaagcccgcc gaatctccct gcgaccccga ggaatagcgt tcacccccgg
      841 gcccgccgtg aaaatcgcga taaaacccgc cccggggcgg gacttcatgg ccctcggcgt
      901 cgatctcgcc gcgatcgaag cgggcgcgct tttcggggtc ggacagcagg tcattcgcgt
      961 tgttcagttc cgagaaccgt tccgcggcct tcttatcgcc aggatgcagg tcagggtgat
     1021 gcttcttggc gagttttcga taagcggcct tgatcgctgc ctcatcggcg tcgcgcgtca
     1081 ggccgaggat ttcgtacggg tctctcatgg cctgggtagt tgagcccgga acgcgagcgg
     1141 atcaagtccc ggtccagacc gcgggacgtt tttccaggaa cgcatcgatc ccttcttcgg
     1201 catcatgggc cagcatgttg cgggtcatga cctcggcggt catggcgtag gcggacgcca
     1261 gatcgaggtc ggcctggcgg tagaacgccg tcttgccgat ggccagggtg aggggactct
     1321 tcccggcgat ctggcgggcc agtgctgtga ctgcggtttc gagttcagca tccgggacga
     1381 cgcggttgac gaggccgaat tcgcgcgccc gttgggcatc gatcaactcg ccggtcagca
     1441 gcatttccat cgctgccttg cggctgacag cacggctcag ggcaaccatc ggggtcgagc
     1501 aaaacaggcc gatatcgacg ccgggggtgg caaagcgtgc tgacgctccg gcgatggcga
     1561 ggtcgcaggt ggcaaccaac tgacagccgg cggcagaggc tgcgccgtgc acccgcgcaa
     1621 tcaccggttt cggcagcttg atgatgcgct gcatcagacg gctgcatagc gcgaacacgg
     1681 cttcatacgc ttcccgggtt ggcgtggcgc gcatctcccg catgtcgtgg ccggcgcaga
     1741 atgccggacc ggcggcggcg ataacgacga cgtggacggc ccggtcggca gcgatcgaca
     1801 gcagttccgc gtcgagcgct tccatgagac cgatggacaa ggcgttgcgg gattgcggac
     1861 ggttcagggt cagcgtggcg atgccgtcct ggtcgtcgcg cagcagggga ggggccttgg
     1921 tcatggagtt tggatccaat cgagttggct gtaaggcgcc aaactcagtc gaacagcagc
     1981 accgaccggg cgacttcccc ggccttcatc gcccggaagg cgtcgttgat gtcgcccagt
     2041 acgccgcggc gggaaatcat cgagtcgaga tccaggcgac cctggcgata gaactccaga
     2101 tagttcggaa tgtcggtgcg gaactggttc gatcccatgc gtgaggtctg caccttgcac
     2161 tcgggccgga tcgccagcca cggaaattcg atgcgcgcat cgggcggcag cacgccaacg
     2221 atcgttgcgg tgccgcgcac ggcaaggctc tcgatcgcct gacggcacag caccgccaga
     2281 cccacagcct cgaatgcgtg gtcgacgccg aggcctttgc tcaaggctcg cacggctttc
     2341 accgcgtcgt cctgggtgga gttgacggta tgggtcgcgc cgacggcttt ggccatttcc
     2401 agtttggact cgaactgatc gaccgcgatg atctgccgcg cgccgccgat ccgagcgccc
     2461 tgaacgatgg acaggccgac gccgccacaa ccgaacacgg cgacggtctg gccggcctgc
     2521 aagccactgc tgcgaagcgc cgcaccgacc ccggtcagca cgccgcaacc aaccagcgcg
     2581 gcccggtcga gcggcaggtc cggatcgatc cgcaccagcg agttctcgtg caacagcata
     2641 tgcgatgcat aactgccgat atttgcgaat tgctggaaca actggccatt ttgcgaaagg
     2701 cgattttccc gcccaacgat gccgccggtg caaacgttgg ggtggccgct gaggcattgc
     2761 ggacaattgc cgcaaaagcc ggacaagcag gcaacgacgt ggtcgccctt gcgcacggcg
     2821 gtgacatcgt cacccacagc ctcgaccaca ccggagccct cgtgacccag cacgaaggga
     2881 cggtcgaggt tgaagcggcc gaggccatcc acgatgtgca gatcgctgtg gcaaacgccg
     2941 gtggcgacgg tgcggaccag gacctcacgg ccgcgcggtt catcgatttc gatggtttcg
     3001 atggtcagcg gctggtggac ctctcgaaat acggcggcgg tgatatgcat gggtttcctc
     3061 cctgggctgg cctatcattt acccaggttg cttcaaccgg caaataccgc cggcgcgaga
     3121 cgctgatcgt agtaggtttc ccgctgtgag gcttgacttc gccctcttac tatgacaatt
     3181 tatgtcatag ggtgccagcc acgctcatcc tgcatcgacg acgtgtcttc gatgatggtg
     3241 gtcttattga gatgaagctt tggcaggtac ccaatccggt ccgaggttcg aagcatgaat
     3301 ttaggtacag cctgttctac ggccgggagg gtcgacggct ggttggctat gacaacgaag
     3361 cgggcaaggg agatcaccgg cattatggtg cgatcgaaga agcgtatttt ctcaccacac
     3421 cggaacgtct tattgccgac ttc
//
LOCUS       DATAVD010000627         5786 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_806705, whole genome shotgun sequence.
ACCESSION   DATAVD010000627 DATAVD010000000
VERSION     DATAVD010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5786
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_806705"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..902)
                     /locus_tag="VHX39_11730"
     CDS             complement(<1..902)
                     /locus_tag="VHX39_11730"
                     /inference="COORDINATES: protein motif:HMM:NF015083.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxidase family protein"
                     /protein_id="HEX3991829.1"
                     /translation="MTILLDMFQPIGGIDNTIDPSLNPIPGTPELTIAPLNFAPGTTD
                     TPITGPDPRTLSNVVSGGQSADGENANTNDPTGASAWLYAFGQFVDHDLGLESVGTTD
                     DSITVPDGDPNFPDGTTIPLTRAITSPTTGTAVNTIAGGLDLSQIYGSDAATAASLRN
                     ADGTLKTSAGDALPIVNGAFVSGDARVDENPELTDISTLFVREHNYWVGVLKAQNPSW
                     SGDQLYNMARAITTAEYQNVIYTEYLPALLGKNAVGPYTGFNPTVNTELTQEFSTAAF
                     RVGHSQVSGNQEGIDNNGNVTFTQT"
     gene            complement(1806..2312)
                     /gene="nusB"
                     /locus_tag="VHX39_11735"
     CDS             complement(1806..2312)
                     /gene="nusB"
                     /locus_tag="VHX39_11735"
                     /inference="COORDINATES: protein motif:HMM:TIGR01951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEX3991830.1"
                     /translation="MKPPERQQTGRPQPGRPRTRTASRVAAVQALFQSEQASENPETV
                     IDQFVRHRLGETAAEHGYEDGRIPDAEVPLFAQIVRAAVRQQDTIDAMVAEALPADWP
                     LARIDPVLRALLRAGGAELAASDGAPAKVVINEYLDIARGFFTGPEPGLANAVLDRLA
                     RLLRTAEF"
     gene            complement(2309..2791)
                     /gene="ribH"
                     /locus_tag="VHX39_11740"
     CDS             complement(2309..2791)
                     /gene="ribH"
                     /locus_tag="VHX39_11740"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEX3991831.1"
                     /translation="MSTEDAPLPSAPKVEGAPPHLLIIRAPYYKSVIDGMTEGAERIL
                     REAGATCESLDIAGAYELPQTIRLAVRGAKRFDGFVALGCIIRGETDHYEFICRASME
                     GIMSVSLQFGLCVGTGLLTCDTMAQAEARSGMDGFNKGAEAAVAALLQINAARRLGAA
                     "
     gene            complement(2826..3980)
                     /gene="ribB"
                     /locus_tag="VHX39_11745"
     CDS             complement(2826..3980)
                     /gene="ribB"
                     /locus_tag="VHX39_11745"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEX3991832.1"
                     /translation="MENLALNTLAHAELSKYLSSAEELIEEARNGRMFILLDDDDREN
                     EGDLVIPAQFATPDAINFMARHARGLICLALTQTRVEKLGLPLMSQQNGTRHQTAFAV
                     SIEAREGVTTGISAADRAKTIAVAIHADSTRDQITTPGHVFPVVAREGGTLVRAGHTE
                     ASVDIARKAGLHPSAVICEIMNDDGTMARLPDLVTFAQKHNLKLGTIADLIAHRRLTE
                     RLVRKVEEGVFKHAAGGDWRAVVYANTVEYQEHLALVKGDVSDGAPVMVRMHAVDLLD
                     DMTGQPHWIAVHNAMHMIGKAGRGVVVMIREHRKTALAERVRLLSAQPRQPRELRDYG
                     IGAQILLDLGVQNMILLTNRRRTVIGLDGYGLNIVEQRLIPNIVGGGYEV"
     gene            complement(3980..4579)
                     /locus_tag="VHX39_11750"
     CDS             complement(3980..4579)
                     /locus_tag="VHX39_11750"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014414181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEX3991833.1"
                     /translation="MFTGIVTALGTIRAIQPIGGGKDMRLVIAAPWPDTATIAIGASI
                     ACSGCCLTAVEVNADSFAGDASAETLACTILGGWTVGSRINLERSLKIGDELGGHMVS
                     GHVDGVGEAVSATAENGSTRWWFRVPKPLSRFIATKGSVAVNGVSLTVNEVQDDMFGV
                     NVIPHTASVTGFGTMKPGDKVNIEIDMLARYVARLTETT"
     gene            complement(4580..5689)
                     /gene="ribD"
                     /locus_tag="VHX39_11755"
     CDS             complement(4580..5689)
                     /gene="ribD"
                     /locus_tag="VHX39_11755"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEX3991834.1"
                     /translation="MPIPAEPDLNFMRAALALGRRGLGTTWPNPSVGCVLVRDGRVVG
                     RGYTGSGGRPHAEPTALSMAGEAARGATAYVTLEPCCHWGQTPPCTDALIEAGVARVV
                     IAMLDPDKRVDSQGVARLREAGIEVDHGVLEAEASEDQAGFVLRVTQERPMITLKLAT
                     TLDGKIATSTGESQWITGPEARRMAHVLRGRHDAVLAGVGTVMADNPELSCRIAGFRP
                     TPVVRVIVDSHLRTPLTSKLAQTAAEAPLWLLVRDGVDPARREAFAGIGAKVIDIAAG
                     AAGIDLIDGLTALAQEGLTRVLVEGGGQVAASFIRADLVDRIAWFHAPSVMGGDGWPS
                     VQSFGMEKIARMPRFVRTRSIPLGSDMLTELKRPT"
BASE COUNT         1143 a         1820 c         1650 g         1173 t
ORIGIN      
        1 gtctgcgtaa acgtgacgtt gccgttgtta tcgataccct cctgattgcc ggacacctgc
       61 gagtggccga cgcggaacgc cgcggtggag aattcctggg tgagctcggt attcaccgtc
      121 ggattgaaac cagtgtaggg accaactgcg ttcttcccca gtagcgctgg tagatattcc
      181 gtataaatga cgttctggta ttctgcggtg gtgattgccc tcgccatgtt ataaagctga
      241 tcgccggacc agctcgggtt ttgcgctttg agaacgccga cccaataatt gtgttcccgc
      301 acgaaaagcg tcgatatatc cgtcagttcc ggattttcgt cgacgcgggc atcgcccgat
      361 acgaacgctc cgttgacgat cggcagagcg tcgcccgctg aggtcttcaa cgtgccgtcc
      421 gcgttacgca ggctcgccgc ggtcgccgca tccgaaccat aaatctgcga tagatcgagg
      481 cctccggcaa ttgtattgac cgcggtaccg gtcgttggac tggtaatcgc ccgggtcagc
      541 ggaatcgtcg tgccatccgg aaagttggga tcgccatccg gcacggtaat actgtcatcc
      601 gtggtgccga cgctttccag accgaggtca tgatcgacga attgcccgaa cgcgtagagc
      661 cacgcggatg cgcccgtcgg atcgttggta ttcgcgttct ctccgtctgc gctctgacca
      721 ccggagacga cgttactcag agtacgcgga tcaggcccag tgattggggt atccgtggtg
      781 ccaggggcaa aattgagtgg cgcgattgtg agttcgggtg ttcccggtat cggattgagt
      841 gacggatcaa tcgtgttgtc gatgccgcca attggttgga acatgtcgag aaggatggtc
      901 ataagtcctg tcccccgctg ggtttttggt tgtgttgtac tgacgtcgat cggcatcatc
      961 agatagttac tgatgataca atagagacga catctcccgc tcggatgacg ctatgcgcca
     1021 catccggcag ttccatcgat ttgctgtgtg ggcctgccgt cgctacaatt gcggcatccc
     1081 ctcggaatta tccgagtgac ttatggtcgc gcatggcgga attctccttg ccagaaaagc
     1141 agcatccggt tgtcgccggg tatggcatta gacgcggccg gatccaaact tatcagatcc
     1201 tggttaataa ctccgccgaa ccaggacgga atcgatgaag cgcggcaccc gggatcgttg
     1261 gccgcgggcc atattacaat gcgctcgtct cggttagctt atgcgctgtc cgatgaactc
     1321 agcagtaccg gcgtgctgca agcaggtcaa ccgcgaattg cggatatcac attacagtct
     1381 gtttcattag tatacatcac gcaactttgg ccgcggcgat agtgcataat tccacataaa
     1441 ggcaaaaacg ctgctctgac attaacgttc cgcgctgctt cgtctatgat cgcatatcag
     1501 gacatggcca gatggccgcg acggccactg atcatgccgc cagctaatgt gttgatccga
     1561 gggagaatat tcgggcaagt cctggatctg ataaaatccc gtctggaagt ggtccgccat
     1621 tcggcccggg cgctgttccg ctcgggggta ttccaccatg gacgatgttt aacaaaccgg
     1681 aaatgttcgg acagttgtgg gatctcgatc ggatcagcgc acaatcggcc cgcctcaggg
     1741 ctgatcgagc catcggcgac cgggcgagct gtccgtccgc tcaggctgac cgataacctc
     1801 tgggcctaaa actccgccgt ccgcaacaac cgcgccagcc ggtcgagcac cgcgttcgcc
     1861 aggcccggtt caggtccggt gaagaacccg cgtgcgatgt cgaggtactc gttgatcacc
     1921 acctttgcag gggctccgtc ggatgcggca agctccgcgc cgcccgcccg cagtaacgca
     1981 cgcagcaccg ggtcgatccg cgccaggggc cagtccgccg gtaatgcctc agcgaccatc
     2041 gcatcgatcg tgtcttgctg ccgaacggca gcccgcacga tctgggcgaa caacggcact
     2101 tcggcatcag ggatgcggcc gtcttcgtag ccatgttcag cggcagtctc ccccaggcga
     2161 tggcgcacaa actgatcgat gaccgtttcc ggattctccg acgcctgctc gctttggaac
     2221 agtgcctgga ctgcagcgac acgagacgcc gtccgcgttc tgggtcgacc aggctgggga
     2281 cgaccggttt gctggcgttc cgggggcttc acgccgcgcc gaggcggcgg gccgcgttga
     2341 tctgcaacag cgccgccaca gcagcttcag cgcccttgtt gaagccatcc ataccggacc
     2401 tcgcctcggc ctgcgccatc gtgtcgcagg tgagcaaccc ggtgccgaca caaagaccga
     2461 actgcaacga cacgctcatg atgccttcca tgctggcacg acagataaat tcgtaatgat
     2521 cggtttcgcc gcggatgatg cagcccaaag cgacaaagcc atcgaaccgt ttggcgccgc
     2581 gtacggccag ccggatggtc tgcggcaatt cataagcacc ggcgatatca agagattcac
     2641 aggtcgcgcc ggcttcacga agaattcgct cggcaccttc ggtcatgcca tcgatgacgg
     2701 atttatagta cggcgcgcga atgatcagca aatgcggagg cgcaccttca acctttggcg
     2761 cggagggcag cggggcatct tcggtactca tgaaatccaa ccgccatggc aatgcagagg
     2821 caatctcata cctcgtatcc cccaccaaca atattcggga tcagccgctg ctcgacaatg
     2881 ttcaacccat aaccatccag cccaatgacc gtccgccgcc gattggtcag cagaatcatg
     2941 ttctgtacgc ccagatcgag caggatctgt gcgccgatcc cataatcccg caactcgcgt
     3001 ggctgacgcg gttgcgccga cagcaaccga acccgttctg ccagtgcggt cttgcgatgt
     3061 tcgcggatca tcacgaccac gccgcgaccg gctttgccga tcatatgcat cgcattatgc
     3121 acggcgatcc agtgcggttg cccagtcatg tcgtccagca aatcgaccgc atgcatccgc
     3181 accatcaccg gtgcgccatc ggagacgtcg ccctttacca gcgcaagatg ctcctgatat
     3241 tccacagtgt tggcataaac gacggctcgc cagtcgccgc cggcggcgtg tttgaacaca
     3301 ccttcctcga ccttccgcac cagacgttcg gtcagccgcc ggtgtgcaat cagatcggcg
     3361 atggtgccca atttcagatt gtgtttctgg gcgaaggtca ccagatccgg cagtcgggcc
     3421 atcgtgccgt cgtcgttcat gatctcacag atcacagcag acgggtgaag gccggcttta
     3481 cgcgctatat cgaccgaggc ctcggtatga cccgcgcgca ccagggtgcc gccctcccgc
     3541 gccacgaccg ggaatacatg ccccggggtc gtgatttgat cccgggtgct gtcggcgtga
     3601 atcgccaccg cgatggtctt tgcccggtca gcggcggaaa tgcccgtggt aacgccttcg
     3661 cgcgcctcga tcgataccgc gaaggcggtc tgatgccgtg tgccattttg ctgactcatc
     3721 agcggcaggc cgagtttctc aacgcgcgtc tgggtcagcg cgaggcaaat cagcccccgc
     3781 gcatgccgcg ccatgaaatt aatcgcatcc ggcgtcgcaa actgggctgg aataaccagg
     3841 tcgccttcat tttcccggtc gtcatcgtcg agcaggatga acatccgccc attgcgggct
     3901 tcttcgatca attcttccgc gctcgacaaa tatttcgata attcggcatg agccagcgtg
     3961 ttcaaggcca ggttttccat cacgtcgtct ccgtaagccg ggccacataa cgtgccagca
     4021 tgtcgatctc gatgttgacc ttgtcgccag gcttcatggt accaaacccg gtgaccgagg
     4081 cggtgtgtgg gatcacattc accccgaaca tatcatcctg cacttcattc accgtcaacg
     4141 atacgccgtt taccgcaacg ctgcccttcg tggcgatgaa tcgagaaagc ggcttcggca
     4201 cccggaacca ccatcgcgtc gaaccatttt ccgctgttgc cgacacggct tctccgacac
     4261 cgtcgacatg gcccgagacc atatgaccgc caagttcatc gccaatcttc aacgatcgtt
     4321 ccaggttgat ccggctgccg acggtccagc caccaaggat tgtgcaggcc agcgtctcgg
     4381 ctgaggcatc accggcaaag ctatcggcgt tcacctccac tgcggtcagg cagcagccgg
     4441 aacaagcaat cgaagcgccg atcgcaatcg ttgcggtgtc cggccatggg gcagcgatca
     4501 cgaggcgcat gtccttgcca ccgccgatcg gttggatggc acggatggtg cccaaagcgg
     4561 tgacaatccc ggtgaacatt caggtcggcc ttttgagttc ggtcagcata tcagagccta
     4621 aaggtatgct gcgagtacgg acaaagcgag gcatcctggc aattttttcc attccgaaac
     4681 tctgtaccga cggccagccg tcgccaccca tgaccgacgg ggcatgaaac caggcgatcc
     4741 gatcaaccag atcggcccga atgaaggagg ctgcgacctg gcccccgcct tccaccagca
     4801 cacgggtcag cccttcctga gccagcgcgg tcaggccgtc gatcagatcg atcccggcag
     4861 ctccggcggc tatgtcgatc accttggcgc cgatgccggc aaaagcttcg cgcctggccg
     4921 gatcgacccc gtcacggacc agcaaccata acggtgcctc ggctgcggtt tgcgccagtt
     4981 tgctggtcaa cggcgtgcgc aggtggctgt cgacgatcac gcgcaccacc ggcgttggac
     5041 ggaaacccgc aattcggcag ctcagctccg ggttgtccgc catgaccgtg ccgacccccg
     5101 ccagcactgc gtcatgtcgg ccgcgcaata catgggccat ccggcgcgcc tcgggaccgg
     5161 tgatccattg gctttctccc gtggaggtag cgatcttgcc atccagcgtg gtggcgagtt
     5221 tcagtgtgat catcggccgc tcctgggtga ctctcaggac aaaccccgcc tgatcctcac
     5281 ttgcctccgc ctccagcaca ccgtggtcca cttcgatgcc ggcttcccgc aggcgcgcca
     5341 cgccctgact atcgacccgc ttgtccggat cgagcatcgc gatcaccaca cgagccaccc
     5401 ccgcctcgat caaagcatcc gtgcacggtg gcgtctggcc ccaatggcag catggctcca
     5461 acgtgacgta ggcggtcgca cctcgggcag cctctccagc catggataaa gctgtgggtt
     5521 ctgcgtgggg acgtccgccg gagcctgtat aacctcggcc gacgacacgc ccgtcgcgca
     5581 ccagcacaca tcccaccgac ggattgggcc aggttgtccc cagaccgcgc cggcccaatg
     5641 ccagagcggc gcgcatgaaa ttcaggtcgg gttccgcggg tatcggcatg caggtgatgt
     5701 tcgcacagtg gtaagttccc cggaatacac agcaccatca tactctacat ctctaagaat
     5761 cttatctaag gtttagagag agtggc
//
LOCUS       DATAVD010000628         4294 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1360307, whole genome shotgun sequence.
ACCESSION   DATAVD010000628 DATAVD010000000
VERSION     DATAVD010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4294
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1360307"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1520
                     /locus_tag="VHX39_11760"
     CDS             <1..1520
                     /locus_tag="VHX39_11760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cobaltochelatase subunit CobT"
                     /protein_id="HEX3991835.1"
                     /translation="RAKLAEECEQEGFDRMTRKDQMPVDKALALLARERLSGEPVPEG
                     AQRILSMWRETLGENADAAFSEMTAAQGDQNAFARAARKLLAALDLAEAEVESEPDDN
                     TDDGEDGGEQSGQQENSEQGDGQSESESESMLGANPEEMEGEAADDDGSDSEDEAAVA
                     EGDDRPGGPQPRRDRGGPDAEGAYRAYTRAFDEEIDAEELCDADELSRLRQQLDQQLQ
                     HLQGVISKLANRLQRKLLAQQTRAWEFDLDEGMLDAGRLSRVVVNPLLALSYKRELDM
                     EFRDTCVSLLIDNSGSMRGRPITVAAMCGDILARTLERCAVKVEVLGFTTRAWKGGQS
                     REKWVQDGKPRNPGRLNDLRHIVYKAADAPWRRARKNLGLMLREGLLKENIDGEALLW
                     AYRRLLVRPEHRRILMVISDGAPVDDSTLSVNPGNYLEKHLREVIRDIQNRDQVELIA
                     IGIGHDVTRYYQRAVTIVDAEELGGTMMKKLTELFDEDAQAAWARAAAERSAVVA"
     gene            complement(1570..2316)
                     /locus_tag="VHX39_11765"
     CDS             complement(1570..2316)
                     /locus_tag="VHX39_11765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010508619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3991836.1"
                     /translation="MNAVTDFPIVAKSLGGLRPCATCRVRKVSVCDAIPEADLARLGA
                     CAIGGVARPGTLFIAESDPATAFFNIVSGTARLYKLMPDGRRQITGFADGGNFLGLAV
                     SDTYAFSAEAIDTVRYCIFPRIRLRALMRDFPQMEARLLKFASTELVAAQEQMLLLGR
                     KSAQERVASFLMARSRLAAAHDFPAFFVLPMARGDIADYLGITIETVVRTLRKLRDGG
                     MIEVTNTSEVVICDLTALQCLADGSSSHRE"
     gene            complement(2576..>4294)
                     /locus_tag="VHX39_11770"
     CDS             complement(2576..>4294)
                     /locus_tag="VHX39_11770"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX3991837.1"
                     /translation="LALWAQVLSAYLLGFSAFALMLPQAIEGWLAVLLVWHLVRRDFG
                     AGAGILAAGFLAVTPISIAVDRSNNTDSLLVLVLLVAVWAFPRAGDRAAPWRLILAMA
                     LIGVGFNVKMAAALGLLPGIVVAYFITARASWVWRVIDLAAGVTALLLVSAAWLSVVA
                     MTPPEGRPFVDSSVSNSILELAVDHNALQRFLPNAWRQLAAHGVRAGATPVNPAAAPG
                     TAGNAIGAPPQATAPVRRAWTLAPPPAVARLASPVLASQVLWLLPLALGGAVAMVAAR
                     RGEAACIWIGWAVAYAVVFSAAGGLFSPYYLVMLGPPLAVLAGVGVAALVGLCRGHSY
                     HRVWLPMMLILGFAWQAYILHPEIWEGTRGMLLIAALIGIVVALGGLVPALWRQRETA
                     SVVTFAIGVTALLIAPAAWSITTIAHEGGRPLARLEPPLPWLRRSVSAETEAALALLP
                     FLQENRGGARFLAATTNARLAAPLIIATGEPVIAFGGFLGSMPVLDGAALEQLARTGA
                     LRFVILGRGRQFWASAPRTDAGQWVRTRGMRLDPETIAPSVGNTPVELFDLGEGSSPA
                     ARGDRS"
BASE COUNT          905 a         1341 c         1370 g          678 t
ORIGIN      
        1 tgcgcgccaa actcgctgag gaatgcgagc aggaaggctt cgaccgcatg acgcggaagg
       61 accagatgcc ggtcgacaag gcgctggctc tactggcgcg cgaacggctt tcgggcgagc
      121 cggtgccgga aggcgcgcaa cgaattttgt cgatgtggcg ggaaaccctt ggcgagaacg
      181 ccgacgccgc tttcagcgaa atgactgcag cccagggcga ccaaaacgcg ttcgcgcggg
      241 cggctcggaa attgttggcg gcactcgatc tggccgaggc ggaggtggag tccgaacccg
      301 acgacaacac cgacgacggt gaagacggcg gcgagcaatc cggccagcag gaaaattcgg
      361 aacagggcga cggtcagtcc gaatctgaat cggaatcgat gctcggtgcc aatccggaag
      421 agatggaagg cgaagcggcc gacgacgacg gctcggattc cgaagatgag gcggcggtcg
      481 ctgaaggtga cgaccggccg ggcggcccgc aaccgcgccg cgatcgtggc ggtccggatg
      541 ccgagggagc ctaccgcgcc tatacccgcg cattcgacga ggaaatcgac gccgaggaac
      601 tttgcgacgc ggatgaactg tcgcggttac gccagcaact cgatcagcag ttgcaacatc
      661 tgcaaggcgt gatttcgaag ctcgccaacc ggctgcagcg gaaattgctg gcgcagcaaa
      721 cccgggcctg ggagtttgac ctcgacgagg ggatgctgga cgccggacgg ttgtcgcggg
      781 tcgtagtcaa tccgttgctg gcgctgtcct acaagcgcga actggacatg gagttccgcg
      841 acacctgcgt ttcattgctg atcgacaact ccggttcgat gcgcggacgg ccgatcacgg
      901 tggcggcgat gtgcggcgat atactggccc gcacattgga acgctgcgcg gtaaaagttg
      961 aagtgctggg atttaccacg cgggcctgga agggcggaca aagtcgcgag aaatgggtgc
     1021 aggacggcaa gcctcgcaat cccggccggc tgaacgatct gcggcacatt gtctataaag
     1081 ccgctgatgc tccgtggcgg cgggcgcgca aaaatctcgg gctgatgctg cgtgagggct
     1141 tgctgaagga aaacatcgac ggcgaggctt tgctgtgggc gtaccgccgc ttgctggtgc
     1201 ggcccgagca ccgccgtatc ctgatggtga tctcggacgg cgcgccggtc gatgattcca
     1261 cactgtcggt gaaccccggg aactacctgg agaaacacct gcgcgaagtg atccgcgaca
     1321 tccagaatcg cgaccaggtc gaactgatcg ccatcgggat cggtcacgac gtcacgcggt
     1381 attaccaacg cgccgttacg attgtcgacg ccgaggaact cggcggcacg atgatgaaaa
     1441 agctgactga actgttcgat gaggacgccc aggcggcctg ggctcgggcg gcggcggaac
     1501 ggtcggcggt ggtggcatag cgccttaggt tacgcgagcc gcctttcgcc ggttggtcga
     1561 cgtatattgt cattcccgat gcgacgacga tccgtcggcc aggcattgca acgcggttag
     1621 atcacaaatg acgacttccg acgtgttggt cacttcgatc attcccccgt cgcgcaactt
     1681 ccgcagcgtg cggacgacgg tctcgatggt gatcccaagg tagtcggcaa tatcgcctct
     1741 cgccatcggc agcacaaaaa acgccggaaa gtcgtgcgcg gcggcaagtc ggctgcgtgc
     1801 catcagaaac gacgcgactc gctcctgcgc gcttttgcgg cccagtagca gcatttgttc
     1861 ctgtgccgcg acaagctcgg tggaggcgaa tttcaacaat cgggcttcca tctgcgggaa
     1921 gtcacgcatc aacgcccgca ggcggatccg cggaaatata caataacgca cagtgtcgat
     1981 cgcttcggcg ctgaacgcgt aggtgtcgga tactgccagg ccaagaaaat ttccgccgtc
     2041 ggcgaatccg gtgatctgac gccgcccatc cggcatcaac ttgtaaagcc tggcggtccc
     2101 actgacgata ttgaagaacg cggtggcagg atcggattct gcaatgaaca aagtaccagg
     2161 ccgcgcgacg ccaccgatgg cgcaggcacc gagccgcgca aggtccgctt cgggaatggc
     2221 gtcacagacg cttactttgc gaactctgca ggtcgcgcaa gggcgtaatc cgcccagtga
     2281 tttcgcgacg atcggaaagt cggtaaccgc gttcatgaag tcgttctgct tgagtccgtt
     2341 tactctttat taacatttgc gcacgcgaac cagccgcgcg aagcagtcga cgctgatccg
     2401 cctggagttc acgtgcaagg caataacgcg gtatttttcc gttaaaagga cctggatcgc
     2461 gcaaggcatg ccacttgccg gatcaggcca actggatccg ggagcttatt gcatctgttc
     2521 gcattgctga cggccaacat tcccgcggat caacgaaccc ggttgctgca accttttaag
     2581 acctgtcgcc acgcgccgcg ggcgacgagc cttctcccag atcgaacaac tcaaccggcg
     2641 tgttacctac cgagggcgcg attgtttccg ggtcgagccg catcccgcgc gttcggaccc
     2701 attgccccgc gtcggtgcgg ggagctgatg cccaaaattg cctgccgcgc ccgaggatca
     2761 cgaaacgcag cgcgccggtt cgcgcgagtt gctccagcgc cgcaccgtca agcaccggca
     2821 tcgagcccag gaagccaccg aatgcgataa ccggttcgcc ggtggcgatg atcagaggtg
     2881 ccgcgaggcg tgcgttcgtg gtcgcggcca ggaagcgcgc tccgcctcgg ttctcctgca
     2941 ggaacggcag cagagccaag gccgcctcag tctccgccga gacactccgt cggagccagg
     3001 gcagtggagg ttccaggcgc gccaacggtc ggccgccctc gtgcgcgatg gtcgtgatcg
     3061 accatgcggc aggggcaatc aacagtgccg tgacaccgat cgcgaaggtt acgacggatg
     3121 cggtctcccg ctgccgccag agcgcgggaa cgagcccgcc aagcgcgacc acgatcccga
     3181 tcaacgctgc gatgagcaac atgccgcggg tgccctccca aatctcgggg tgcagaatgt
     3241 acgcctgcca cgcaaagccg agaatcaaca tcatgggaag ccacacgcga tggtacgaat
     3301 ggccacgaca caggcccaca agcgctgcca cgccgacccc ggccaacacc gccagaggcg
     3361 gccccaacat caccaggtag tatggggaaa acagacctcc ggccgcgcta aatacgaccg
     3421 cataggccac agcccagccg atccagatac aagcggcttc gcctctcctg gccgcgacca
     3481 tcgccaccgc accgccaagc gccaaaggca acagccacag gacctggctt gcgaggactg
     3541 gacttgcgag acgtgccacc gctggcggcg gagccagcgt ccaggcgcgc ctgactggcg
     3601 cggttgcctg gggcggggct ccgattgcgt taccggcagt tcccggcgcg gctgcgggat
     3661 tgaccggggt cgcgccggca cgaaccccat gggccgcaag ttggcgccag gcgttgggca
     3721 aaaagcgctg caacgcattg tgatcgacgg ccagctcgag gatcgagttg ctcacgctgc
     3781 tgtcgacaaa gggccgacct tccggtgggg tcatcgcgac gacgctcagc caggccgccg
     3841 atacaagcag cagcgcggtt acgccggctg cgagatcgat tacgcgccag acccaggaag
     3901 cccgggccgt aatgaagtac gccaccacga taccaggcag caaacccaac gccgcagcca
     3961 tcttcacgtt gaacccgacg ccaatcagtg ccatcgccag aatgaggcgc cacggcgctg
     4021 cccgatctcc ggcgcgtggg aaggcccaaa ctgcgaccag cagaaccagc accagcaggc
     4081 tgtcggtgtt gttggaccgg tcgaccgcaa tgctgatcgg agttaccgcc agaaacccag
     4141 ccgccagaat gcccgcaccc gcgccgaaat cgcgacggac caggtgccac accagcagta
     4201 ccgcaagcca accctcgatg gcctgtggca gcatcagtgc aaatgcactg aaaccgagca
     4261 ggtaggcact caagacctga gcccagagcg cgag
//
LOCUS       DATAVD010000629         5080 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3410100, whole genome shotgun sequence.
ACCESSION   DATAVD010000629 DATAVD010000000
VERSION     DATAVD010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5080
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3410100"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..570)
                     /locus_tag="VHX39_11775"
     CDS             complement(<1..570)
                     /locus_tag="VHX39_11775"
                     /inference="COORDINATES: protein motif:HMM:NF024923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HEX3991838.1"
                     /translation="MDDMTANAEQTHAGQTQTADRPPEKSGVWKRILGFTAGAIVLVA
                     VIVGGTLYWLNARHYESTDDAFVDAYSTQIAPRVPGQVTRLLFADNQHVKAGQTLLLI
                     DPRDYQAKLDQAKAQQASAEATVRQAQAQVVVQQASVDQAAANVQVAQADLVQARQDY
                     GRFQAINPHAVTRQQIDAATATFHSSQAKL"
     gene            698..1321
                     /locus_tag="VHX39_11780"
     CDS             698..1321
                     /locus_tag="VHX39_11780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010668382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX3991839.1"
                     /translation="MDVNVTLSPEKRAQILIGAAAVFAADGYEGASMARIASVAGVSK
                     GTLYNYFDSKAALFTAYVCQKCDQFLAQTFDIANLDGDPAEVLRGIGTRMVRMMLSDA
                     GLAIYRVVIAEAAKFPALARGFFEAGPARAIGFLAEWLAEETRRGRLTVPDPAFAAEQ
                     FFNLCQTRLVIRRKLEMLPDPPDSDINAVIEASITMFLRSYQAAPRI"
     gene            1701..2753
                     /gene="cysD"
                     /locus_tag="VHX39_11785"
     CDS             1701..2753
                     /gene="cysD"
                     /locus_tag="VHX39_11785"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004694369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_process: GO:0019419 - sulfate reduction [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HEX3991840.1"
                     /translation="MSDLSEKTAVQASVDTGIRNFATPFRQTADTPLEAAISRYAAQS
                     DGSPHGRRLSPHLRRLEAESIEIMREVVAQFRNPVFLYSIGKDSTTMLHLARKAFYPA
                     NPPFPFLHIATTWDFHEMIVYRDILAAKLGIDLRVHTNEDGLRRGINPIASGPTVHAQ
                     VMSTEGLKQALDKWQFDAAFGGARRDEEKSRAKERIFSFRTPQHTWDPRNQRPELWNI
                     YNTRVARGESIRVFPISNWTETDIWSYIAAEEIPVVPLYFSKVRPIVRRQGGLLLVDD
                     ERLPLNDGEEPEMMKVRFRTLGCYPLTAGMESSARNVDEIVAEMLASRKSERQGRLID
                     HDEAASMERKKREGYF"
     gene            2762..4633
                     /gene="cysN"
                     /locus_tag="VHX39_11790"
     CDS             2762..4633
                     /gene="cysN"
                     /locus_tag="VHX39_11790"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysN"
                     /protein_id="HEX3991841.1"
                     /translation="MPSTLDQILRSDGQEKELLRFLTCGSVDDGKSSLIGRLLYDSKL
                     IFEDQLSAVERDSRKHGTVGEEVDLALLVDGLEAEREQGITIDVAYRYFTTPRRAFIV
                     ADTPGHEQYTRNMATGASTADLAIILVDARKGVLTQTKRHSYICSMLGIRSIVLAVNK
                     MDLVDFAGERFYQIVSDYVGFAKTLGFATICPIPLSARYGDNVTVRSERTPWYDGPTL
                     IQHLESADVATDLSTRPLRFPVQWVNRPNLDFRGFSGTVASGTVKAGDDVVVAATGAK
                     ARIARIVTFDGDRERGMPGDAVTLVLDNEIDVTRGDVLTHPDTRPECVDQLAAHILWM
                     SQDEMLPGRSYLMRVGTAETPASVTTLRHKIDVNTLEHGSGRTLALNEIGLCNISTAR
                     PIAFDPYTENRRTGAFVLIDRATNATAGAGMISFGLRRATNIHRQHHAVDKAARAALN
                     HQKPRIVWFTGLSGSGKSTIADLVEKSLHARGMYTMLLDGDNLRHGLNRDLGFTEADR
                     VENIRRVGEVAKLFVEAGQVVICCFISPFESERAMVRGLVEPDEFVEVFVDVPLEECI
                     KRDPKGLYKKALAGELQNFTGVNSPYQAPAASEIRIDGTQESAETAAEQITTWLLSH"
     gene            complement(4730..>5080)
                     /locus_tag="VHX39_11795"
     CDS             complement(4730..>5080)
                     /locus_tag="VHX39_11795"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase domain-containing protein"
                     /protein_id="HEX3991842.1"
                     /translation="SATSSSGASFDRALNANFSAAKLLQSIEAEKNPGIMFLKYEDFV
                     LDNEKTIDRIFRFCGLASIRSDERGMNDLFATHATSSSPAASIGRWKKDLSTEQLKKC
                     EVFNPFLNYFEYET"
BASE COUNT          992 a         1547 c         1563 g          978 t
ORIGIN      
        1 cagcttggcc tgggatgagt ggaacgtcgc cgtcgccgca tcgatctgct ggcgggtcac
       61 cgcatgcggg ttgatcgcct ggaagcggcc gtagtcctgc ctggcctgca ccaggtcggc
      121 ttgcgcgacc tgcacgttgg cggcggcctg atccacgctg gcctgctgca cgaccacctg
      181 ggcctgcgcc tggcgcacgg tcgcctcggc actggcctgc tgcgccttcg cctggtccag
      241 ctttgcctga taatcccgtg gatcgatcag cagcagagtc tggcccgcct tgacatgctg
      301 gttgtcggcg aacagcagcc tggtcacctg cccgggcacg cggggggcga tctgggtgga
      361 ataggcatcc acgaaggcgt cgtcggtgct ttcgtaatgc cgcgcgttca accagtacag
      421 ggtaccgccg acgatgacgg ccacgagcac gatcgcgccc gcggtgaacc ccaaaatgcg
      481 cttccagacg ccggattttt ccggcggacg gtcggcggtc tgtgtctggc cggcatgggt
      541 ctgctccgcg ttcgcagtca tgtcgtccat cggcggtgct ccacgatcag gtgatttcgg
      601 atcagccaca ttgaccgaac ggttcggtca actatgtaag acaggtaggc ggctgacaca
      661 ggttgtcaat acggccggcg cgcgggatgg ttcgtccatg gatgtcaacg tgacgttaag
      721 tccggaaaag cgggcgcaga tccttatcgg tgcggccgcc gtgttcgccg cggacggcta
      781 cgagggcgcg agcatggcca ggatcgcgtc cgtcgccggc gtctccaagg ggacattgta
      841 caactatttc gacagcaagg ccgccctgtt cacggcctat gtctgccaga aatgcgacca
      901 gttcctcgcc cagacattcg acatcgccaa cctggacggc gatccggccg aggtcctgcg
      961 gggcatcggc acgcgcatgg tgcggatgat gctgtccgac gccggtctgg cgatctatcg
     1021 cgtggtcatt gccgaggcgg ccaagttccc cgcgcttgcc cgcggtttct tcgaagcggg
     1081 gccggcgcgc gcgatcgggt tcctggcaga atggctggcg gaggagacgc ggcggggccg
     1141 cctgacggtg ccggatccgg ccttcgccgc ggagcagttc tttaacctgt gccaaacccg
     1201 cctggtgatc cgccgcaagc tggagatgct gcccgatcca ccggacagcg atatcaatgc
     1261 agtgatcgag gcgtccatca ccatgttcct gcggagctat caggcggccc ctcgcatctg
     1321 aatacattgg tgttgtttgg aacgaattga ctttccgcca gtttgaattg gcgtgaccgt
     1381 gacccacgtt ccattggtca aagagtcgtt gtaacggtcg cggcactggg gctaaatgac
     1441 ggtgctggag atttggagca acaatgagga cgaaattgac ccaggtttcg gccttgaacc
     1501 gggtgccggc ctgttccgct ggggcatgcg caagcggacc gggtgatgtt ccggaacgag
     1561 atgtcccaac cccaggtcga tactttatcg cgacaatcgc cgactggact ttctccgcca
     1621 gaccatgatc catccgtcgc aattcgtcca tccgtcacgg ctcgcccccg agcgggccgc
     1681 gttctgagag agtgtcagcc atgtcggact tatcagaaaa aacggcggtg caggcatctg
     1741 tcgatacagg catccggaat ttcgccacgc cgttccggca gaccgccgac acgccgctgg
     1801 aagccgcgat cagccgctat gccgcacagt ccgacggttc gccgcatggc cgccggcttt
     1861 cgccgcatct gcggcgcctg gaagcagaat cgatcgaaat catgcgggaa gtggtggcgc
     1921 agttccgcaa cccggtcttc ctctattcca tcggcaaaga ttcgacgacg atgctgcacc
     1981 tggcacggaa ggcgttctat ccggccaacc cgcccttccc gttcctgcat atcgccacga
     2041 cgtgggactt ccacgagatg atcgtctacc gcgacatcct ggcggcgaaa ctgggcatcg
     2101 acctgcgtgt ccataccaat gaggacgggc tgcggcgcgg gatcaatccg atcgcatccg
     2161 gtccgaccgt acatgcccag gtgatgagca cagaaggcct gaaacaggcg ctggacaaat
     2221 ggcaattcga cgccgccttc ggcggtgctc ggcgcgatga agagaaaagc cgagcaaaag
     2281 aaaggatttt ttcgtttcgg acaccgcagc atacgtggga tccgcgcaat cagcggccgg
     2341 aattgtggaa catctacaac acacgtgtcg cccgcggtga gtcgatccgg gtgtttccga
     2401 tctccaactg gaccgaaacg gatatctggt cgtacatcgc agccgaggaa atcccggtgg
     2461 tgccgctgta cttctcgaaa gtccgtccga tcgtgcggcg ccagggcgga ttgctgctgg
     2521 tggacgacga acggctgccg ttgaacgacg gcgaagaacc ggaaatgatg aaagtgcgct
     2581 tccgtacgct gggctgctat ccactaaccg ccggcatgga gtcatcagcg cgcaacgtcg
     2641 atgaaatcgt tgccgaaatg ctggcatcgc gcaaatcgga gcgccaggga cggctgatcg
     2701 atcatgacga agccgcgtcg atggaacgca agaagcggga gggatatttc tgatggccga
     2761 catgccctcc acgctggatc agatcctgcg gtccgacggc caggaaaagg aactgttgcg
     2821 gttcctgacc tgcgggtcgg ttgacgacgg caagtcatcg ctgatcggcc ggttattgta
     2881 tgattcgaaa cttattttcg aagatcagct ttccgccgtc gagcgcgaca gccgcaagca
     2941 cggcaccgtc ggcgaagagg tcgatctggc ccttctggtg gatgggctgg aagccgaacg
     3001 cgaacagggc atcaccatcg acgtagccta ccgctatttc accaccccgc gtcgtgcctt
     3061 catcgtcgcc gacaccccgg gtcacgagca atacacccgc aacatggcga ccggggcctc
     3121 gacggccgat ctggccatca tcctggtaga tgcccggaag ggcgtcctta cgcaaaccaa
     3181 acgacacagc tatatctgct cgatgcttgg catcaggtcc atcgtgcttg ccgtgaacaa
     3241 gatggatctg gtcgatttcg ctggtgagcg gttctatcag atcgtgtccg actatgtcgg
     3301 tttcgcaaag accctggggt ttgcaacgat ctgcccgatc ccactgtccg cccgctatgg
     3361 cgacaacgtc acggtccgct cggagcgcac accatggtat gacggaccga cgttgatcca
     3421 gcatctggaa agcgcagacg tcgccaccga cttgtccacc cggccattgc gatttccggt
     3481 gcaatgggtc aatcgcccca acctcgattt ccgcgggttt tcgggcacgg tcgcgtccgg
     3541 caccgtgaag gcgggggacg atgtggtggt cgcggccacc ggagcaaagg ccaggatcgc
     3601 ccggatcgtc accttcgacg gcgatcgtga gcgtgggatg cccggcgacg ccgtgacact
     3661 ggtgctggat aacgagatcg acgtcacccg gggcgatgtt ctgacccacc ccgatacccg
     3721 ccccgaatgc gtcgatcaac tcgccgcgca tatcctgtgg atgagccagg atgaaatgtt
     3781 gcccggccgt tcctacctga tgcgggtcgg caccgccgaa acaccggcta gcgtaacgac
     3841 gctgcggcac aagatcgacg tcaacacgct ggagcacggg tcagggcgca ccttggcact
     3901 gaatgaaatc gggctgtgca acatctccac cgctcggccg atcgcgttcg atccgtatac
     3961 cgaaaaccgt cgcaccggcg cgttcgtgct gatagaccgc gccaccaacg ccaccgcggg
     4021 cgccgggatg atctcgttcg ggctgcgccg agcgaccaac atccatcgcc agcatcatgc
     4081 cgtggacaaa gccgctcggg ctgccctgaa tcaccagaag ccccgcatcg tgtggttcac
     4141 cggcctgtcc ggttcgggga aatcgaccat cgccgatctg gtcgagaaat ccctgcatgc
     4201 gcggggcatg tacaccatgc tgctggacgg cgataacctg cgtcacggtc tgaatcgcga
     4261 cctgggcttt accgaggccg accgggtcga aaacatccgg cgggtcgggg aagtggccaa
     4321 gctgttcgtc gaggccgggc aggtggtgat ctgctgtttc atctcaccgt tcgaatccga
     4381 acgcgcgatg gtgcgcggcc tggtcgaacc ggatgaattc gtcgaagtct tcgtcgatgt
     4441 accgctggaa gagtgcatca agcgcgatcc caagggtctg tacaagaagg cgctcgcggg
     4501 cgaattgcag aacttcaccg gtgtgaacag tccctaccaa gcgccggccg cgtcggaaat
     4561 ccgaattgac ggcacacagg aatccgccga gaccgcggcg gagcagatca ccacctggct
     4621 gctgagccat tgataacggc gggggacagt ccgaaaccgc ccggccgctc aacagtgcgt
     4681 ctttcgcgtg atttacgcct tccggtcttc ggcctcaggc gatcacactc taagtttcgt
     4741 attcgaaata gtttaagaac ggattgaaaa cctcacactt tttcaactgt tccgtactta
     4801 gatctttctt ccaacggcca atcgacgcgg ctgggctgga actggttgca tgcgtggcga
     4861 acaggtcgtt catgccgcgt tcatcggaac ggatcgacgc caagccgcag aaacggaaga
     4921 ttcgatcgat ggttttctca ttatccagca cgaaatcttc atacttcaga aacatgatgc
     4981 caggattctt ctcggcctcg atcgattgaa gcagtttggc ggcgctgaaa ttggcgttta
     5041 gtgcgcggtc gaacgacgcg ccgcttgacg aggtcgccga
//
LOCUS       DATAVD010000630         3308 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1360602, whole genome shotgun sequence.
ACCESSION   DATAVD010000630 DATAVD010000000
VERSION     DATAVD010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3308
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1360602"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..293)
                     /locus_tag="VHX39_11800"
     CDS             complement(<1..293)
                     /locus_tag="VHX39_11800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopropionate ammonia-lyase"
                     /protein_id="HEX3991843.1"
                     /translation="MPAFTLFMNPRHGTPGTVTLPVSGFRRAKAEITTWDGYQPTPLR
                     DLTSPGVVRLKDEAGRFGLGSFKVLGSAYAVVNLLADTLARRHITPSARSADLA"
     gene            526..1989
                     /locus_tag="VHX39_11805"
     CDS             526..1989
                     /locus_tag="VHX39_11805"
                     /EC_number="3.2.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019691833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008714 - AMP nucleosidase activity
                     [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA];
                     GO_process: GO:0044209 - AMP salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AMP nucleosidase"
                     /protein_id="HEX3991844.1"
                     /translation="MSDQSERGLTPEQALDRLEVLHTAASDALRTALERFVRTGAPPT
                     LEERETFRYPELRLVWHPLGQIPFTRRAWAKFQVPGIHVTTITQPAFFRHYLLEQLQP
                     LVAEYGATIDVAVSDQEVPYPYVLEPESEIMAGAASPADLARHFPTPMLSTVGDEVPD
                     GLWVFGDERPLALFDAVRVDYSLRRLVHYTGTDWRAIQPWILLTNYQRYVDQFVQLGL
                     GELAEPDSPYGQLVMPGGSVIHHGDDPAGARAKVAEAPWHRFQMPAYHLVRKGSRDGV
                     TIVNIGVGPSNAKNITDHLAVLRPHCWLMVGHCGGLRQSQAIGDYVLAHAYLRRDRIL
                     DDLVPTDVPIPALAEVQVALQEAVAAVTGARGDALKRRLRTGTVVTYDDRNWELRWSR
                     ERRHINLSRAIAVDMESGTLAAQGYRLRVPYGTLLCVSDKPLHGEIKLPGSASAFYQR
                     AVGEHLTIGLATLDLLRGQLGALHSRKLRSFDEPPFR"
     gene            2127..2669
                     /locus_tag="VHX39_11810"
     CDS             2127..2669
                     /locus_tag="VHX39_11810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991845.1"
                     /translation="MSQTARVHITDQHLVFFGTIVQLYARHEVLMQEIMATISGADVT
                     SIRLLTTGFNFPEKQMALFNLLRHRVVPIDQIDQIRNYLQMANTYLSLRNDIVHSTWT
                     DALPQNAVRPLWLTHGSQAALKPVHDIDKGSKEFIEDYQDKVTYTLDDLREIGENLAM
                     NFTGFRDYITKVNLVSSHPA"
     gene            2763..>3308
                     /locus_tag="VHX39_11815"
     CDS             2763..>3308
                     /locus_tag="VHX39_11815"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004061 - arylformamidase activity
                     [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEX3991846.1"
                     /translation="MIHDHAKWGPGDQVGAGNLLTVEKRLAALASVKQGRVYDVSHEI
                     FMGAPYMAPNQTPFLMSIWGSWRDTIKRRRKMGATNDAGTNLERIEMTAHVGTHIDAL
                     GHFSKGDMLYNGNCAADVVTDWGLDRLGIENAPPMITRGLLFDVAGADGGQHLNPGRT
                     VTPDDLKRAADVGGFVVQPGES"
BASE COUNT          658 a         1011 c         1029 g          610 t
ORIGIN      
        1 gcgagatcgg ccgaacgagc agacggcgta atgtgtcgcc gcgccagagt atcggcgagt
       61 agattgacca ctgcgtaagc ggaccccagt actttgaaac tgccaagacc gaaacgaccc
      121 gcttcatctt tgagccgaac aactcccggc gaggtcagat cgcgcagagg tgtgggctgg
      181 taaccgtccc aggtcgtgat ctccgctttg gcgcggcgaa atccggacac cggcagcgtc
      241 accgtgccgg gcgtgccgtg gcgagggttc atgaacagag tgaatgccgg catgctgcga
      301 acctggcgcc tgacccatcc tggtgcaaca gacgccccga attgttgcgg acacccccgt
      361 ggcggcatac gcaggggcgc cgggttgcct gcccgcaatg acgggcgaga cgcgccgcga
      421 catgcaagcc gccttgcccg ccgggaaccc atcatgtcac gatccgcacc gatacacctg
      481 acgcgcgttc cctggagcac ctgcctcgga agggtataac ggctgatgtc tgaccaatcg
      541 gagcgcggcc tcacccctga acaggcgttg gaccgccttg aggttttaca tacggccgcc
      601 tcagacgcgc tgcgcaccgc gctcgagcgg tttgtccgca cgggtgcgcc gccaaccctg
      661 gaggaacgcg agacgttccg ctacccggaa ctgcgcctgg tctggcaccc tctcggccaa
      721 ataccgttca ctcgccgagc ctgggcaaag ttccaggtcc ccggcattca cgtgaccacc
      781 atcacacagc cggcattttt ccggcactat ctactggaac agctgcagcc tctggtcgcg
      841 gaatatggcg ccaccatcga cgttgcggtc agcgaccagg aagtgccgta cccgtacgtg
      901 ctggagccgg agagcgaaat catggcgggt gccgcttcgc cggctgatct cgcgaggcat
      961 tttcccaccc caatgctgtc gaccgttggc gacgaggtgc cggacggcct ctgggtattt
     1021 ggcgatgagc ggccgctggc gctgttcgac gccgtgcggg tcgattattc gttgcgccgg
     1081 ctggtgcact acaccggcac ggattggcga gccatccagc catggatcct gctgaccaac
     1141 tatcagcgat atgtcgatca attcgtgcaa ctggggcttg gcgaactggc ggaaccagac
     1201 agtccgtacg gacaactggt gatgcccggc ggcagtgtca tccaccacgg tgacgatccg
     1261 gccggcgcca gagccaaggt ggcggaggca ccgtggcatc ggttccagat gccggcctat
     1321 catttggtgc ggaaaggcag ccgggatggg gtcacgatcg tcaatatcgg cgtcgggcca
     1381 tccaacgcga agaacatcac cgaccacctc gccgttttgc ggccgcattg ttggctgatg
     1441 gttggccatt gcggcgggtt gcggcaatca caggccattg gcgactatgt gctcgcccat
     1501 gcctacctga ggcgggaccg catcctggat gatctggtgc cgaccgatgt gccgatcccg
     1561 gcccttgccg aggtccaggt agcattgcag gaggccgtgg ccgcggtgac cggcgcgcgc
     1621 ggcgatgcgc tcaaacgtcg gctgcgcacc ggcaccgtcg tgacctacga cgatcgcaac
     1681 tgggagctcc gctggtcgcg agaacggcgc cacatcaact tgtcgcgcgc catcgcggtc
     1741 gacatggaaa gcggcacttt ggcggcacaa ggctaccgtc tgcgggtccc ctacggaacg
     1801 ctgctttgcg tgtccgacaa gccattgcac ggcgagatca agttacccgg ctcggccagc
     1861 gccttctacc agcgcgccgt gggcgagcat ctgaccatcg gtctggccac tctcgacctg
     1921 ttgcgcggac aactgggcgc gctgcactcg cgcaagctgc gcagtttcga cgagcctcca
     1981 ttccggtaac atgcaacagg tcgacaaagt cgggaccgca aggttaatct ggcgtccata
     2041 tgcggcgttg cttcggtgtt ccggtgctcc gaattgtttg ggtatccgat gggtgggttc
     2101 tagtcacgcc aggaaaggct tggtcgatga gtcaaacggc acgggttcac atcactgacc
     2161 aacacctggt tttcttcggg acgatcgtgc aattgtacgc caggcacgag gttcttatgc
     2221 aagagatcat ggcgaccatc agtggggcgg acgttacctc gatccggctg ttgaccaccg
     2281 ggttcaactt tccggaaaag caaatggcgc tgttcaattt gttgcgccac cgcgtcgtgc
     2341 cgatcgatca aatcgaccaa attcgaaatt atctgcaaat ggccaacact tatctttcgt
     2401 tgcggaacga catcgtgcac tcgacctgga ccgatgcgct accgcaaaac gcggtgcggc
     2461 cgttgtggct gacccatggc tctcaggccg cgctcaaacc ggtgcacgac atcgacaagg
     2521 gcagcaagga gttcatcgag gattaccagg ataaagttac ctatactctg gatgacctac
     2581 gggagatcgg cgaaaatctg gcgatgaatt ttaccggatt tcgcgactat atcacgaagg
     2641 ttaacctggt ttcttcacat ccggcataac cgacgaggag accatgcgcg tgggatgacg
     2701 ctccggcgat caagtcacgg cgcggccgac cgtcgaatga agcaacgaag gagtgcattc
     2761 ttatgatcca cgaccatgcc aaatggggac ctggcgacca ggtcggggcc gggaaccttc
     2821 taacggtaga gaaacgactt gccgcgctgg cgagcgtcaa acagggtcgg gtctacgacg
     2881 tcagccacga gatcttcatg ggcgcgccgt acatggcacc caatcaaacg ccgttcctga
     2941 tgtcgatctg gggctcctgg cgcgacacca tcaagcgccg ccgcaaaatg ggcgctacca
     3001 acgatgccgg aacgaacctg gagcgtatcg agatgacggc ccatgtcggc acccatatcg
     3061 acgcgcttgg ccatttctcc aaaggcgaca tgctctacaa cgggaattgc gcggccgacg
     3121 tggtgacgga ctgggggctc gaccggctgg ggatcgagaa tgcaccgccg atgatcaccc
     3181 gaggattgct gttcgacgtg gcgggtgcgg atggcggtca gcacctcaat ccaggccgga
     3241 ccgttacgcc agacgatctg aagcgcgccg ccgacgtcgg cggatttgtg gtgcaaccgg
     3301 gtgagagt
//
LOCUS       DATAVD010000631         2468 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_807021, whole genome shotgun sequence.
ACCESSION   DATAVD010000631 DATAVD010000000
VERSION     DATAVD010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2468
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_807021"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..792)
                     /locus_tag="VHX39_11820"
     CDS             complement(<1..792)
                     /locus_tag="VHX39_11820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3991847.1"
                     /translation="MSNAASGMISPGGGDDTEPPPFFGRQKRVNQIRPALALEIRGLA
                     KSFERPAVDRLDLNVIAGEFYTLLGPNGAGKTTTLRMVTGLLRPDRGSIAIFGIDALA
                     DPIGARRIMAWVSDEPMLYEKLTPLEYLSFVAGLWGVDGDAAAARARDLLGVLGLTAN
                     AAQRCERLSKGMRQKVALAGALIHEPKLIILDEPFTGLDAGSSRVVKEVLRQRVQEGC
                     SVIMTTHILEVAERMAERIGVIAQGRLIAEGTLEELRTRTRHGEAS"
     gene            1108..1965
                     /locus_tag="VHX39_11825"
     CDS             1108..1965
                     /locus_tag="VHX39_11825"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3991848.1"
                     /translation="MPIPVTKSGAACGAEISFDLSQPIDDATFGEIERHFHDNIVVCF
                     PAQTMSEAQHIDFSRRFGELEIHIVKKYLLPGWPEILLISNVRNEAGDLIGLADAGFT
                     WHTDTSYRRQPSRCSLLCAKEVPHQNGQSLGDTVFANTIAAYDALPKTMQRRLTGLKA
                     IHRYSERRRVENSPRPKLTAAQLAETPDIAHPIVRTHPYTGRKALYITAGECVGIVGM
                     PDDEAVDLIAELDAHCVRPEFHYRHRWRVGDLLMWDNATCMHLAICDYALPQRRLMHR
                     TTVIGSEPF"
     gene            complement(1976..>2468)
                     /locus_tag="VHX39_11830"
     CDS             complement(1976..>2468)
                     /locus_tag="VHX39_11830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3991849.1"
                     /translation="AHETFRLRSGAPWTSARQVGDAVIVETPQGPHMADYLICGTGVE
                     MDFTRRPELSRLADNIARWADRYTPPAEERDDRLARFPYLAADFSLLPRQPEVSDWMS
                     DIHMFNIASTMSFGPSGASINAMTTAVPKLVAGLTRGLFKGDLQRHWQSLQNYHDPQA
                     VLP"
BASE COUNT          480 a          767 c          751 g          470 t
ORIGIN      
        1 gctggcttcg ccgtggcggg tgcgggtgcg cagctcctcg agggtcccct cggcgatgag
       61 gcggccctgg gcaatgacgc cgatccgctc ggccattcgc tcggcgacct cgaggatgtg
      121 ggtggtcatg atgaccgaac agccttcctg tacgcgctgc cgcaatactt ccttaacaac
      181 ccgggacgaa ccggcatcga ggcctgtaaa cggttcatcg agaatgatca gtttcggctc
      241 gtggatcagc gctccggcga gcgccacttt ctgacgcatg cccttggaca aacgttcgca
      301 acgctgggcg gcattggctg tcagaccgag cactccaagc agatcgcgcg cccgggctgc
      361 agcggcgtcg ccatcgactc cccataagcc ggcgacgaag ctgagatact ccaacggcgt
      421 cagtttctcg tagagcatcg gttcatccga gacccaggcc atgatccgtc tggcgccgat
      481 cgggtcggcc agcgcatcga tcccgaaaat ggcgatggag ccgcgatccg gacgcagcag
      541 accggtcacc atgcgcaacg tggtggtctt gcctgcgccg ttgggcccga gcagcgtata
      601 aaactccccg gcgatcacat tcagatccaa ccggtcgaca gccggccgtt caaaactctt
      661 ggcaagccct cgaatttcga gggcgagcgc aggtcggatc tgattcacgc gtttttgccg
      721 gccaaaaaac ggcggcggtt cagtgtcatc gccacctcct ggggagatca tgccggacgc
      781 ggcattgctc atatcgtgta gttcgtatcg cggggcgcga tcaagcggcc cggtgcggta
      841 taccgggcga ctggtaacat gacggtgact ggcggcggtc catgctccgt gagcggttct
      901 ccggcttatt tggagcagct gcgccccaat cttaaggcga ttttgcacaa tggggttatc
      961 aacaggtcgg ggcggcagaa ccgcgccgag gtgccggatt tctacggtca ccccgccgga
     1021 aggattgcct cggttgcgca gtccagtttg acgcacgagg ccgcacccgc gagagtgccg
     1081 cgaaccaaga gaggacatgt ccttgcgatg ccgatcccgg tgacgaaatc aggcgccgcc
     1141 tgtggtgccg aaatcagctt cgacctgtca cagccgatcg acgacgcgac gtttggcgag
     1201 atcgaacgac attttcatga caacatcgtc gtgtgctttc ccgcgcagac gatgtctgaa
     1261 gcccagcaca tcgatttcag ccgccgcttc ggcgagttgg aaatccatat cgtgaagaaa
     1321 tacttgctgc ctggctggcc ggagatcctg ctgatctcga acgtgcgcaa tgaggccggc
     1381 gaccttatcg gccttgccga tgccggcttc acctggcaca ccgacacgtc gtaccggcgt
     1441 cagccaagcc gctgttcgct gctttgtgcc aaggaggtgc cgcaccagaa cggacaatcg
     1501 cttggcgaca cggtgttcgc caacaccatc gcggcgtatg acgcgcttcc gaaaaccatg
     1561 cagcggcggc tcaccggttt gaaagcaatc catcgttatt ccgagcggcg gcgcgtcgag
     1621 aacagtccgc gaccgaaact gactgccgcg cagttggccg aaacgcccga tattgcccat
     1681 ccgatcgttc gcactcaccc ttataccggg cgcaaggccc tgtacatcac agcaggcgag
     1741 tgcgtcggga tcgtcggcat gccggatgac gaggcggtcg acctgatcgc cgaactggat
     1801 gcgcattgcg tgcgtcccga gttccactac cggcatcgct ggcgggttgg cgatttgctg
     1861 atgtgggaca atgccacgtg catgcacctc gcgatttgcg attacgcgct gccgcagcgg
     1921 cgattgatgc accggaccac ggtgatcggg tcggagccgt tttaatccct cgccgtcacg
     1981 gcaataccgc ttgcggatcg tgatagttct gcaaagactg ccaatgccgc tgcaaatctc
     2041 ccttaaataa cccgcgcgtc agtccggcta ccagcttcgg caccgccgtc gtcatggcgt
     2101 tgatcgacgc acccgacggt ccgaaactca tggtcgaggc gatgttgaac atgtgaatgt
     2161 cggacatcca atcggatacc tcaggctgcc gtggcagcag ggaaaaatcg gctgccagat
     2221 aagggaagcg tgccagccga tcatcacgtt cctctgccgg tggcgtgtat cgatcggccc
     2281 atcgggcgat attgtccgcc aaccgggaca actcggggcg ccgggtaaaa tccatttcga
     2341 caccagtgcc gcatatcaga taatccgcca tgtgcgggcc ctgaggtgtc tccacgatca
     2401 ccgcatcgcc aacctgccgt gccgaggtcc agggtgcgcc ggagcgtagc cggaacgttt
     2461 catgggca
//
LOCUS       DATAVD010000632         2052 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3410372, whole genome shotgun sequence.
ACCESSION   DATAVD010000632 DATAVD010000000
VERSION     DATAVD010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3410372"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            34..867
                     /locus_tag="VHX39_11835"
     CDS             34..867
                     /locus_tag="VHX39_11835"
                     /inference="COORDINATES: protein motif:HMM:NF025377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ESX secretion-associated protein EspG"
                     /protein_id="HEX3991850.1"
                     /translation="MTTTIDGLWVLQILAGIEVLAPELGLRPILPSFETPQMALQHPI
                     AAELRDAGVIDDGGTVDPVIVEWLTVLSRRDVALLIHVRNPEVGERPAMAVVARFAQW
                     WVVMERSEDLVRVGGAGTATAEGTANSVLIAQIERLCGTNNPAPFRPITLDVDALLSE
                     VTSQESLRQFLTKQQMDADQQRMLLQAADPTRSTQASIVALQSGVETGQPTRTHVENG
                     AVTIIDSPEGRLVSEQVPSGGKKWMVVAPGSASNIAAAITSMVRRLPANEEWFSYRKV
                     V"
     gene            1026..1931
                     /locus_tag="VHX39_11840"
     CDS             1026..1931
                     /locus_tag="VHX39_11840"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MinD/ParA family protein"
                     /protein_id="HEX3991851.1"
                     /translation="MVTPRKIPPGSGWRKFLYNASFQTVNLGESPAERHYRELQGRIR
                     RHIRKQYVVGVVSGKGGVGKTTLTACIGAVFRECRPENVVAIDAAPGFGTLAGRIDEA
                     PPGDYSAVLNDTDVQGYADIREHLGQNSLGLDVLAGNRASDQPRPLVPSMFAGVLSRL
                     RRTHNVIVVDTSDDLEHPVMKAVFDACDTLVFVSGLTADTSLPVTRAIDLLRSMGYHE
                     LVSRSMVILNDSRNKYDADARAYLTERFGQSGATVEFMPFDQHLAKGGIIDTQHELQK
                     KTRLRLFEITAALADKYVPDADRPR"
BASE COUNT          411 a          583 c          638 g          420 t
ORIGIN      
        1 tgtgcgcccc agcggcttgg atagaccggc atgttgacca ccacgatcga tggactctgg
       61 gttcttcaga tactcgccgg cattgaagtg ctcgcgcctg agctcgggct gcgcccgatc
      121 ttgcccagct tcgagacgcc gcaaatggca ctgcagcatc caattgccgc agaattgcgg
      181 gacgccggcg ttatcgacga tggcggcacc gtcgacccgg ttattgtcga atggctgacg
      241 gtgctctcgc gcagggatgt cgcgctcctc atccatgttc gcaatcccga agtgggggag
      301 cgaccggcga tggcggtagt ggcgcgattt gcgcaatggt gggtcgtgat ggagcgctcc
      361 gaggacttgg tccgtgtcgg cggcgccgga actgcgacgg ccgaaggcac cgctaactcg
      421 gttctcatcg cccagatcga aagattgtgc ggcaccaaca atccggcccc gtttcggccg
      481 atcacacttg atgtcgacgc gttgctgtct gaagtgacca gtcaagaatc actgagacag
      541 tttctgacca aacagcagat ggatgccgat cagcagcgca tgttgctaca ggcggcggat
      601 ccgactcgat caacccaggc gtcaatagtc gcgctgcaat ctggcgtgga gacgggtcag
      661 cccacaagga cgcacgtgga gaatggcgcg gtgacaatca tcgactcccc cgagggtcgg
      721 ctggtgtcag agcaggttcc gtccggcggc aaaaagtgga tggtcgtggc cccgggttcg
      781 gcctccaaca tcgctgccgc gatcaccagc atggtgcggc ggttgccggc caatgaagaa
      841 tggttttcct atcgaaaggt tgtgtaagta gaggttatga cgcgcatgtt agcatcggca
      901 tcgtgacaaa tccgtggaac tcgccatcaa attcgacgga gcaagggacg caatcgtcgc
      961 gacaaagtgc gggttcgcgg ccccaacatc ccgactccgt ctcggggaca ttgcgtatct
     1021 ctgacatggt gacaccgcgg aaaattccgc cggggtctgg gtggcgtaaa ttcctttaca
     1081 atgcgtcatt tcaaacggtt aatctcggcg aatcgccggc tgaacgacat taccgtgaat
     1141 tgcaggggcg gatccgccgc cacatccgta agcagtatgt cgtcggcgtc gtgtcgggca
     1201 aaggcggcgt cggtaaaacg acgttgaccg cgtgcatcgg cgcggtgttt cgcgaatgcc
     1261 gtccagaaaa cgttgtcgcc atcgacgctg cgccgggctt cggcacgctg gccggtcgga
     1321 ttgacgaggc gccgccgggt gactactccg ccgttttgaa cgacaccgac gtgcaaggct
     1381 atgccgatat ccgagagcac ttggggcaga acagcttagg attggacgtg ctggcgggaa
     1441 accgggcgtc cgaccaacca cgtccgctgg tgccgtcgat gttcgccggg gtgttgtcgc
     1501 ggttgcggcg tacccacaac gtcatcgtgg tggatacctc cgacgatctc gaacacccag
     1561 tgatgaaggc ggtattcgac gcttgcgaca cattggtctt cgtgtccggg ctgaccgcgg
     1621 acacatcctt gccagtcacc cgcgcgattg atttgttgcg atcgatggga taccacgaat
     1681 tggtgtcgcg cagcatggtg attttgaatg acagccgcaa taaatatgat gcggacgctc
     1741 gcgcttatct aaccgagcgc ttcggccaat ccggtgcgac cgtcgagttc atgccttttg
     1801 atcagcacct ggctaaaggc gggatcatcg acacgcaaca cgaattacag aagaaaaccc
     1861 gcttgcgact atttgagatc actgcggcat tggccgacaa atatgttccg gacgccgaca
     1921 ggccacgtta atgcccaagg tcgcattccc tgcgcgctgc acggttgctg tcgtatgtgg
     1981 cgaacacctg gtctcgcagg tctatccggc ttcggtgccg gtggaggtgt tcgtcgacaa
     2041 catcgttgag ct
//
LOCUS       DATAVD010000633         4745 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1921800, whole genome shotgun sequence.
ACCESSION   DATAVD010000633 DATAVD010000000
VERSION     DATAVD010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4745
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1921800"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..164)
                     /locus_tag="VHX39_11845"
     CDS             complement(<1..164)
                     /locus_tag="VHX39_11845"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEX3991852.1"
                     /translation="MMKTLAPGDVVITPAVDRLSRDTTDLLIIARDIQQAGAGLRSLA
                     EPVLDTTGDFA"
     gene            complement(627..2225)
                     /locus_tag="VHX39_11850"
     CDS             complement(627..2225)
                     /locus_tag="VHX39_11850"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3991853.1"
                     /translation="MSDKSRPRPGRPTNSTSPPSEVTDDVSACPQHVRQALAHLRQHF
                     DERVTLAGLATAAGTSERTLRRNFPRFVGVAPLAYLRQLRLTAVRNELSRGEDSINRV
                     AARHGFTHFGRFSIAYRECFGETPSATCRRARRDSQQLITGRDRGTTNEPCLIVTTSS
                     MDGCGREMNLFADNLGEQLAASLAAVPLLAIRLVPARRDLSAPDRKFARYMLTARVMP
                     EADLIRIVARLVATDDGRHLWGETFDGTLDKVLAFQTRIVATVLEATRSAVMTAEIQA
                     AQNMPAEELRDRDLVLRALPFALSSDQSGRTLETLYRAIELYPDNGLAVALAAWCHAQ
                     SVTPWNKQADRDRSRALTLAERAGVLDPTDALVLTARAAVMTMAQDFDTADTLVQRAL
                     ARDPRCYWAWERRGWLKALTRHSETAIADFEQALRLVGPQSDGASSLFGIGTAHWCHR
                     EYDAAMIWVDRAAARRPNAPGILAQLAGCHIRLGDGVRGRAILATMMRLRPEITAGHI
                     SEAFWFDKPCPSVANVLSQAGLTQ"
     gene            2450..3076
                     /locus_tag="VHX39_11855"
     CDS             2450..3076
                     /locus_tag="VHX39_11855"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX3991854.1"
                     /translation="MIALILHRDQRRRSDMGGLPVSSLKFRLIPILLLIATNPSYALD
                     ARHPDPVSVVAAAFAAQNVGNADAATAFYTDDALISNTRGKTMNGKEGVRHFHEANRA
                     ANVQFSLGSGPTVDGNKVTIRNTTTIDFFEKVGLGPVEVGNIIIVEADKIKSFLPFYP
                     LAAVARIDEACRQHGAGILFFGRPCSEFVDGARAHTSHLIAEGIVSRE"
     gene            3254..3817
                     /locus_tag="VHX39_11860"
     CDS             3254..3817
                     /locus_tag="VHX39_11860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991855.1"
                     /translation="MLHRLMLAGAGVVSAIALSMSAHAQKPPSLSDEEYARQALAAGP
                     EAIAKDASVMRPDPGGTMRILRHGTNGFTCLIMGTDRMCADRNAMQFIHAMMSHEPPS
                     NQLGIAYMLGGDTGPSGEAGGASNTDPSATGKTADNHWVITGPHVMIFGPPSRTLGYT
                     EATDPNPTMPYMMWANTPYEHAMVPVK"
     gene            3899..4450
                     /locus_tag="VHX39_11865"
     CDS             3899..4450
                     /locus_tag="VHX39_11865"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX3991856.1"
                     /translation="MGLVVLNGFIFIGSGAYNVAATEPHWPLTHWIVRMIKLRSVRAH
                     AAGISAPSSLDDDDKVTEGIVHFAAHCVICHGAPGVPNRGFGRKLYPDPPDLAGVSET
                     YGPGELFWIVKNGIKATGMPAWNDHSDEELWAIIAFLRMLPAMSPQAYASLLTASTTR
                     ADHHHHADAVQCGNVPSTPSSSF"
     gene            complement(4507..>4745)
                     /locus_tag="VHX39_11870"
     CDS             complement(4507..>4745)
                     /locus_tag="VHX39_11870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991857.1"
                     /translation="HEAPIVGRIGVSTPILRQINRLCQARRPPCIIRARVIAKTCDKL
                     GIAVWDYLGSRLKVAGNILVQPFDRYVRARFRPA"
BASE COUNT          940 a         1426 c         1459 g          920 t
ORIGIN      
        1 gcgaagtcgc cggtcgtatc cagcaccggc tcggccagcg agcgcaggcc cgcgcctgcc
       61 tgctggatat cacgggcgat gatgagaagg tctgtcgtat cgcgcgagag ccggtcaacc
      121 gccggggtaa tcaccacatc gccgggggcg agggtcttca tcagccgctt gagtgtcgat
      181 agctaattaa gttgtccggt tttggtagca catcatgtgt ccgctcgttg ctcgtccgtc
      241 cgccggagga gcggtgtccc cggcgggcat ttcctggtga gactggcggg accatttccc
      301 ggagccgacc tgccacgtgc tttcgcgtta cgggcgggag cggtcaggga tggcgaagcc
      361 accgcgcctg cgcggcgcgc gtcgctttgc cgatggtcag gccgggacga ggaaacggcc
      421 cccagccgaa ccaggaaacc ggccgatggc gcgagatctc ccgctaccta tggtggtgac
      481 gaccgcgctc aagcaacgat ggccgatcca ctcaccgcgt cgaggaggcc tatttattca
      541 taggcttctg aatgcattct atacacagca gggaatcctc tttgccttgc attatcagga
      601 agccgacaat cggggcgcga gtcgggttac tgcgtcaggc ccgcttggct cagcacattt
      661 gcaacgctcg ggcatggctt atcaaaccag aacgcttcag aaatgtgccc ggcggtgatt
      721 tcaggacgta ggcgcatcat cgtggcgagg atggcgcgac cccgcacccc gtccccgagc
      781 ctgatgtggc aaccggcaag ctgcgcaagt atgccaggtg cgttggggcg gcgcgcagcg
      841 gcacgatcaa cccagatcat cgcggcatcg tattccctgt ggcaccaatg cgcggtgcca
      901 atcccaaaca ggctgctggc gccgtccgac tgcggaccaa ccagacgcag cgcctgctcg
      961 aaatcggcaa ttgcggtctc gctgtgcctg gtcaacgcct tgagccagcc acgccgctcc
     1021 caggcccagt agcagcgcgg atcgcgcgcc agagcacgct gaacgagcgt gtcggcggtg
     1081 tcgaagtcct gcgccatggt catcactgct gcccgggccg tcaatacgag cgcgtcggtc
     1141 ggatcgagca cgccggcgcg ttcggccaat gtcagggcac gcgatctatc gcgatccgcc
     1201 tgcttgttcc aaggcgtcac cgattgcgca tggcaccagg ccgccagggc aaccgcgagg
     1261 ccattgtcgg ggtagagttc gatggctcgg tacaacgtct cgagcgtccg accagactga
     1321 tcggaagaca atgcaaacgg cagggctctc aatacgagat cacggtcacg aagctcttcc
     1381 gccggcatgt tctgggccgc ctgtatttcc gccgtcatga cggcggatcg tgtggcctca
     1441 agcacggtgg cgacgatccg agtctggaat gcgagcactt tgtcaagagt gccgtcgaaa
     1501 gtctctcccc aaagatggcg gccgtcgtcg gtggccacca atcgggcgac gatgcgaatc
     1561 agatcggcct ccggcatcac ccgcgccgtg agcatgtatc gcgcaaactt ccggtcagga
     1621 gcggacagat cgcgtctggc tggcacgagc ctgatggcca gaagcggtac cgccgcgagc
     1681 gatgctgcaa gctgctcgcc gagattgtcg gcaaacaggt tcatctcccg gccgcaaccg
     1741 tccatgctgg aagttgtaac gataaggcag ggctcattag ttgtcccccg atcgcggcct
     1801 gtgatgagtt gttgggaatc ccgccgtgca cgtcgacagg tggcggacgg ggtttcgcca
     1861 aagcattccc ggtaggcaat ggagaaccgg ccgaaatgcg tgaacccatg gcgagcggca
     1921 acgcgattga tcgaatcctc tcctcgtgac agctcgtttc gcaccgccgt caaacgcaac
     1981 tgtcgcagat aggcgagcgg ggcgacgccg acgaaccgag ggaagtttcg gcgcagcgtc
     2041 cgttcggatg tgccggccgc cgtcgcgagg cccgccaacg tcaccctctc atcaaaatgc
     2101 tgccgcagat gggcaagtgc ttgccgcacg tgttgcgggc aggccgagac gtcgtcggtc
     2161 acctcggacg gcggcgaagt gctgttcgtt ggtcggcccg gtcgtggtct tgatttgtcg
     2221 gacatgcagg cattcccggt gccatcttca tcggtcagca taaatcaatt gaccggtatg
     2281 ccaatgcgcg tcgggccgga caattcgcat ttcgtgagca aactccggaa ggctgtccga
     2341 atgcggccga ttccgcacaa ccgtggccgg atctggatag actgcacccg gacggccgcc
     2401 taccctccgc aaatgccagg tcttgctccg tggtacgttg gaaatcgaga tgatcgcctt
     2461 gatcctacac cgtgatcaac ggcgacgttc ggatatggga ggtctacccg tgtcatcctt
     2521 gaaatttcga ttgatcccta ttctcctgtt gattgcgacc aatccatcat atgcgctgga
     2581 cgcgcgccat ccggatccgg tgtccgtcgt ggccgcagcg ttcgccgcgc agaacgttgg
     2641 caatgccgat gccgcgactg cgttctatac ggatgatgcg ctgatatcca atacccgggg
     2701 aaagacgatg aatggcaagg aaggcgtgcg acacttccac gaagcgaacc gtgccgcgaa
     2761 cgtgcagttc agcctcgggt ccggtcccac ggtagacggc aataaagtca caatccggaa
     2821 cacgacgact atcgatttct tcgaaaaggt gggacttggt ccggtggaag taggaaacat
     2881 tatcatcgtg gaagccgaca agatcaagtc gttcctgcct ttctatccgt tggcagcggt
     2941 ggccaggatc gatgaggcat gtcggcagca tggcgccggc atcctgttct tcgggcgccc
     3001 ctgctctgag ttcgtcgacg gcgcgagagc acacacgagc cacctgattg ccgagggtat
     3061 cgtcagcagg gaataacgcc agcgccgccc cgctcaatga ccaagccttc gaaaaacgcc
     3121 gatggtcgtt cctgagtagc ggcgcccaac cagaccctgc cgttcgggct gcccaccggc
     3181 ccgcattaga ctttcggtac cgttgccgcc agggagtggc agttgacttc atactttctg
     3241 aaggaagagc tatatgttgc atcgtctcat gctcgccgga gcgggtgtcg tctcggctat
     3301 tgcactcagt atgagtgcgc atgcgcagaa accgccgtcg ctctccgatg aggagtacgc
     3361 acgacaggcg ctcgccgctg gtcccgaagc catcgcgaag gacgcgtctg tcatgcgccc
     3421 tgaccctggc ggaactatgc ggatactgcg gcacgggacg aacggcttca cctgcttgat
     3481 catgggcact gacagaatgt gcgccgatag gaatgccatg caattcatcc atgcgatgat
     3541 gagccacgag ccgccgtcga atcagcttgg aatagcatat atgttgggcg gtgataccgg
     3601 accgtctggc gaggctggtg gcgccagcaa caccgacccc tcagcgacag ggaaaacggc
     3661 cgacaaccac tgggttatca ctggtccaca cgtcatgatt ttcggcccgc caagcaggac
     3721 tttgggctac acagaggcga ccgatcccaa tccgaccatg ccctatatga tgtgggccaa
     3781 taccccgtac gagcatgcga tggttccagt gaagtaggtc acacgagcgg tgtcattgat
     3841 gggcgagccg cgaggggcgt cgatgaagtt cctgatagcg ggaacgatcg cagccgtgat
     3901 gggtttggtc gtgctgaacg gcttcatatt tatcggttcc ggcgcttata acgtcgccgc
     3961 gaccgaaccg cactggcctc tcactcactg gatcgtcagg atgataaagc tgcgctctgt
     4021 cagggcgcat gcggccggca tctccgcgcc atcaagcctc gatgatgacg acaaagttac
     4081 ggagggtatt gtgcactttg cagcgcattg cgtcatctgc cacggtgcac cgggtgtccc
     4141 gaacagaggt tttgggcgca agttgtatcc tgacccaccc gacctggccg gcgtgtcaga
     4201 gacttacggc cctggtgaac tattctggat tgtaaagaac gggatcaaag cgaccggtat
     4261 gccagcttgg aacgaccata gcgatgaaga actttgggct atcattgcct ttcttcgaat
     4321 gctgccggct atgtccccac aggcgtatgc cagtctgctc accgccagca cgacccgtgc
     4381 tgaccatcac catcatgccg atgccgtcca gtgtgggaat gtgccatcca cgccatcgtc
     4441 gtcgttctaa gccgagcctc ctactttcaa atgtaacagg ggcaaaaacg tgggcgtgtt
     4501 cgccggtcag gccggccgga agcgggctct gacgtaacgg tcgaacggct gaacgaggat
     4561 gttcccggcg accttgagcc tgctgcccag atagtcccag acggcgatgc cgagcttgtc
     4621 gcaggttttg gcaatgaccc tagcccggat tatgcacggt ggtcggcggg cctgacacaa
     4681 ccgattgatc tgacgtagga ttggggtgct gacgccaatc ctgccgacaa ttggagcctc
     4741 atgcc
//
LOCUS       DATAVD010000634         2760 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_245208, whole genome shotgun sequence.
ACCESSION   DATAVD010000634 DATAVD010000000
VERSION     DATAVD010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2760
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245208"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..223
                     /locus_tag="VHX39_11875"
     CDS             <1..223
                     /locus_tag="VHX39_11875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991858.1"
                     /translation="VIFRPSEAFSIQYLINKNAVMARVNLPGGRHDPIDPAMGRSVDA
                     PATWNDVCRTRSGTGPQPSSEYCALPAQT"
     gene            complement(228..728)
                     /locus_tag="VHX39_11880"
     CDS             complement(228..728)
                     /locus_tag="VHX39_11880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991859.1"
                     /translation="MTTYSVKLVDHRNSIAAETVAVRDTIQRVLGLAFVGTSDSITVV
                     WGAGDVSDSLVFHFVEDIAHSYLRLTWPRMTVDRDAGGHTHTHGALAGSELYRTRPSG
                     PLTLRRYGALAFHEALHNLFPFRTDQHTGFGGGIASAHIPDMDPNEINKTFLRQGFSV
                     RNPQLL"
     gene            893..1804
                     /locus_tag="VHX39_11885"
     CDS             893..1804
                     /locus_tag="VHX39_11885"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3991860.1"
                     /translation="MTIRFDDRVAIVTGAGAGLGRQHALLLGSRGAKVVVNDPGGAVD
                     GKGSANAVADQVVAEIKAAGGEAVANYNSVADAKSAQGIIDTAMQTWGRLDILVNNAG
                     ILRDKAFQNMSLEDFEFTSQVHYMGTVYCTKAAWPIMRERRYGRIVVTTSGSGTIGNF
                     GQSNYGAAKMAVVGLINVLRLEGARYNILCNAISPSARTRMTEDLLPEAMRKYMKPEL
                     VSPAVAWMASENCNVTGQIIAAAAGGYSVVQYYQSEGVQFDPEAPVTLEMFDEAFPKL
                     SDMTNAAPLGRNRARLEERLRAMGRVG"
     gene            complement(1814..2206)
                     /locus_tag="VHX39_11890"
     CDS             complement(1814..2206)
                     /locus_tag="VHX39_11890"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HEX3991861.1"
                     /translation="MMTLEEANRIVEGAIAKANELNIRVSVAVCDAGGRLVAFQRMTN
                     AIWASAYGSQGKAVASAAFGRPSGVLAERAHQPTPAGIAAAEGGHMIMGQGAVPILRN
                     GVVEGACGVGGGTAQQDEDCAAAGVAKL"
     gene            complement(2208..>2760)
                     /locus_tag="VHX39_11895"
     CDS             complement(2208..>2760)
                     /locus_tag="VHX39_11895"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3991862.1"
                     /translation="IAKMQGKGIIDAFLDLAVEEDLQTAFLHGENNVDDDAVAAILNY
                     PNSIIGLSDGGAHVQFQSGFGFSTRLLGEWVREKHIMSLETAVRRLTFESASLFGLHD
                     RGLLQPGMVADIVIFDPDTVKPLPHEVVHDFPNGAMRIREPAQGIHMTVVNGQILLED
                     GKHSGSLPGRVLRNPWYRANHRN"
BASE COUNT          574 a          854 c          813 g          519 t
ORIGIN      
        1 cgtgattttc aggccttccg aggccttttc gatacaatat cttatcaata agaacgctgt
       61 catggcacgg gtaaacctgc cgggagggcg tcatgatccg atcgaccctg cgatgggacg
      121 ttctgttgac gcgcctgcaa cctggaatga cgtctgccgc acccgaagcg gcacaggtcc
      181 gcaaccgtcg tcagaatact gcgcactacc tgcgcagaca tgatctttta cagaagttgg
      241 ggattacgca cagaaaagcc ctgacggaga aatgtcttat tgatctcgtt tggatccatg
      301 tcggggatgt gtgcggaagc gataccacca ccaaacccgg tatgctggtc cgtgcgaaat
      361 gggaacagat tatgcaacgc ctcgtggaac gcgagcgcgc cataacgtcg aagcgtcagc
      421 ggcccggagg gcctggttcg ataaagctcg cttcccgcaa gagcgccgtg tgtatgagtg
      481 tgaccgcctg cgtcgcggtc gactgtcatc ctgggccagg tcagccgtag gtaggaatgt
      541 gcgatatcct cgacgaaatg aaacaccaga ctgtcgctga cgtcgccggc gccccacaca
      601 actgtgatgc tgtcactcgt gccgacgaaa gccaggccca acacgcgttg aatcgtgtcg
      661 cggaccgcga cagtctccgc ggcaattgaa ttgcgatgat ccacaagctt cacggaataa
      721 gttgtcacga tctcctcccg ggctcgccgg cgatccatgc aaactattgt aaaggaagtt
      781 ctcacgatgt gaggcgcgtc acatgtcatg aaatcgcggc ggaccttgac cccgccaccc
      841 gtggcgtcac tgtgacggag gttcattcaa ccgcaaggaa ggaaacatcc gaatgacaat
      901 ccgatttgac gaccgtgtcg ccatcgtaac cggcgccggc gcaggtctcg gccggcagca
      961 cgcactgctt ctgggctcgc gcggcgccaa ggtcgtggtc aacgaccccg gcggcgctgt
     1021 cgatggcaaa ggcagcgcca atgccgtcgc cgatcaggtc gtcgccgaaa tcaaagccgc
     1081 cggcggtgag gctgtggcca actacaactc cgtcgctgat gcgaaatcag cgcagggcat
     1141 tatcgatact gcgatgcaga catggggacg gctggacatc ctggtgaaca acgccggcat
     1201 tctgcgcgac aaggcgttcc agaacatgtc gctggaggac ttcgagttca cctcccaggt
     1261 gcattacatg ggcaccgtct attgcaccaa agccgcgtgg ccgatcatgc gtgaaagacg
     1321 ctatggccgg atcgttgtca ccacgtccgg ctccggcacc atcggcaact tcgggcaaag
     1381 caattacggc gcggcaaaga tggccgtggt cggcctgatc aacgtgctgc gactggaagg
     1441 tgcgcgctac aacattttgt gcaacgcgat ctcaccgtct gcccgcacac ggatgaccga
     1501 ggacctgctg cccgaggcca tgcgcaaata catgaagccc gaactggtat ctcccgcggt
     1561 cgcctggatg gcgagcgaaa actgcaatgt cacaggacag atcattgcag cggccgcggg
     1621 cggttactca gtggtgcagt actatcagtc ggaaggcgtg caattcgatc cggaagcgcc
     1681 ggttacgttg gaaatgttcg acgaagcgtt cccgaaactc agcgacatga cgaacgctgc
     1741 cccacttggc cgcaaccgcg cccgcctcga ggagcggctg cgggccatgg gccgcgtcgg
     1801 gtaaaaccgc aagctacagt ttggcaacac cggcggccgc gcagtcctca tcctgctggg
     1861 ctgtgccgcc gccgacgcca caagcgccct cgacaacacc attgcgaaga attggcaccg
     1921 cgccctggcc catgatcatg tgaccgccct cggccgcagc aatgcccgcc ggtgtcggtt
     1981 ggtgtgcccg ttccgccagc acgccactgg gtctgccgaa cgccgctgag gcaacagcct
     2041 tgccctggct gccataagcg ctggcccaga tggcgttggt catgcgttga aacgccacca
     2101 gccggccgcc tgcgtcgcac acggcgacgc tgacgcggat gttgagttcg ttggcttttg
     2161 caatcgcccc ttcgacgatg cgattggctt cttccagtgt catcatttca gttcctgtga
     2221 ttggcgcgat accaaggatt gcgcagcacc cggccaggca acgagccgct gtgcttgccg
     2281 tcctccagca agatctggcc gttgacaacg gtcatgtgga tgccttgcgc cggctcacgg
     2341 atccgcatcg caccgttcgg gaaatcatgc acgacctcgt gcggcagagg cttcaccgtg
     2401 tccggatcga aaatcacgat atctgccacc atgccgggtt gcagcaggcc gcgatcgtgc
     2461 agaccgaaca gcgaggcgga ctcgaaggtc agccgccgca ccgcggtttc cagcgacatg
     2521 atgtgcttct cgcgcaccca ctcacccaga agccgcgtgc tgaaaccgaa gccactttgg
     2581 aactgcacgt gcgcgccgcc atccgacagg ccgatgatcg aattcggata gttcaggatc
     2641 gccgccaccg catcgtcatc gacgttgttt tcgccatgca ggaacgcagt ctgcagatct
     2701 tcttcgacag cgagatcgag gaacgcgtcg atgatgccct tgccttgcat tttggcgatc
//
LOCUS       DATAVD010000635         2541 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_807186, whole genome shotgun sequence.
ACCESSION   DATAVD010000635 DATAVD010000000
VERSION     DATAVD010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2541
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_807186"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(162..1088)
                     /locus_tag="VHX39_11900"
     CDS             complement(162..1088)
                     /locus_tag="VHX39_11900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991863.1"
                     /translation="MPVLSAEQEAASVAAELIAVIVAVTGGQPRVLTIDKGRALPSGP
                     FESNEQSLQASLRTWVERQTHHPLGYMEQLYTFADPGRTGGSGRRIVSVSYLGLTQEA
                     PVSGDPGVGWRDWYQFFPWEDRRKASRLVDDSFTRELIAWTEEAPDAATRRQRWHRVA
                     INFGLENERWNEELILQRYEALWEARLVPESGAKGAIPGVPMAHDHRRILATGIARLR
                     AKIKYRPVVFELMPPSFTLLQLQRAVEALAGSLLHKQNFRRLIDQQDLVEETGEMATE
                     TRGRPAKLFRFRRGVLAERSVAGSKLPLVRSA"
     gene            1211..1879
                     /locus_tag="VHX39_11905"
     CDS             1211..1879
                     /locus_tag="VHX39_11905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010507101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX3991864.1"
                     /translation="MRALYHLPLSPYARKVRLVLAEKRLPVELHLEKPWERRPEYLEL
                     NPAGTVPTLVEDNGMVIPDSTVICEYLDEAYPGNPLVGDTIVERVEVRRLAAWFDGKF
                     AAEVTQNLLGEKYMRQQARRGNPEAAAIRTGYTALRYHLDYLGWLAENREWLAGQNLS
                     LADFAAAAHLSCLDYIGDVDWRLSKPAKDWYARIKSRPGFRTLLTDRVPGLNPPDHYV
                     DLDF"
     gene            1964..>2541
                     /gene="gloB"
                     /locus_tag="VHX39_11910"
     CDS             1964..>2541
                     /gene="gloB"
                     /locus_tag="VHX39_11910"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010669194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HEX3991865.1"
                     /translation="MAVTAQSVPILKDNYAWLLRDSETGATAIVDPAEGPPIIAAIEA
                     AGGRLDMILLTHHHGDHIADADVVRARFPGCKMVGAAADAHRLPKLDQAVREGDTVQL
                     GNATARVIDTPGHTVGQINYFFPGGPILLSGDTLFSLGCGRLIEGDAKQMFASLSKLA
                     ALPDDTLVCCGHEYTEANAKFALSVDPDNKAL"
BASE COUNT          492 a          829 c          768 g          452 t
ORIGIN      
        1 gtcactcctg ttggaatcgg ctgaggcgct gctgaccaag gaaacactgt ccgaagacga
       61 acttcggcca ttcgccgccc ggctggcgca tttggcaagc aaccgtggcg agccggtgcc
      121 cggcgccaac gttgcggcac cggcggcgtg atcaaatggg attacgccga ccgcaccaat
      181 ggcaacttac taccggcgac cgatcgctca gccaacactc cgcgccgaaa ccggaataat
      241 ttcgctggcc ggccacgagt ctccgttgcc atctcgccgg tttcttccac aaggtcctgc
      301 tgatcgatca accggcggaa attctgtttg tgtaacagac ttccggcaag cgcctcgacc
      361 gctcgttgta attgcaacaa agtgaaactc ggcggcatca gttcaaatac gaccgggcga
      421 tatttgattt tggcccgcag gcgggcgatg ccggtcgcca gaatgcggcg gtggtcgtgt
      481 gccatcggca ctcccgggat agcgcctttg gcaccggact ccggcaccag ccgtgcttcc
      541 caaagggcct cgtaacgctg aaggatcaat tcctcattcc agcgttcgtt ttccaggccg
      601 aaattgattg ccacacggtg ccagcgctgc cggcgagtgg ccgcgtccgg cgcttcctcg
      661 gtccaggcga tcagctcacg ggtaaaactg tcatcgacca ggcgggaggc ctttcggcga
      721 tcttcccacg ggaaaaactg gtaccaatcg cgccaaccca cacccggatc gccggacacc
      781 ggtgcctcct gcgtcaggcc caaatagctg accgacacga tccgccggcc tgatccgccg
      841 gtgcggcctg ggtcagcgaa ggtgtatagt tgctccatat agcccagagg atgatgcgtc
      901 tgacgctcaa cccaggtgcg cagactggcc tgcagcgact gctcgttcga ttcaaatgga
      961 cccgaaggca gtgcccttcc tttgtcgatt gtcagcacac gaggttgccc tccggtcacc
     1021 gcgacgatga cggcaatcag ttcggcggcg acggatgccg cctcttgctc cgcgctgagc
     1081 actggcatgg ccaggtcatc gcatgctgcg cgctgcatcg ccagtggtaa tcaccgccca
     1141 ggaaacggcg ctgaccgatc ggcaacgacc cattggcgaa acccggcccc gggtgcgata
     1201 acgccgcgtg atgcgcgcac tctatcatct cccgctgtcg ccctacgctc gcaaggtccg
     1261 cctggtgctg gccgaaaagc ggctgcccgt cgagctgcac cttgagaaac catgggaacg
     1321 gcgacccgaa tatctggaac tcaacccggc cggaacggtg ccgaccctgg tcgaggacaa
     1381 cggcatggta atcccggatt ccaccgtgat ctgtgaatac ctggacgagg cctatccggg
     1441 aaacccgctc gtgggcgaca cgatcgtcga acgggtcgag gtccggcggc tcgctgcctg
     1501 gttcgatggc aagttcgctg cggaggtcac gcaaaacctt ctcggcgaaa agtacatgcg
     1561 ccagcaggca cgccgcggta atccggaggc tgccgccatc cgcactggtt ataccgcgct
     1621 tcggtatcac ctcgattacc tgggatggct ggcggaaaat cgggagtggc tggctggaca
     1681 gaacctgtcg ctggccgatt tcgccgccgc ggctcacctg tcgtgcctgg actatatcgg
     1741 ggacgtggac tggcggctgt ccaagccggc aaaggattgg tacgcccgga tcaagtcccg
     1801 gcccggcttc cgcaccctgc tgaccgaccg tgtgcccgga ttgaacccgc cggaccatta
     1861 cgtcgatctc gacttctgac gctggacgga taggctgcaa caatccgttt cagtggccag
     1921 tcaactgcaa ctgccacaag atgcctgcac aggagacaat accatggccg taactgctca
     1981 atcggtgccg atcctgaagg acaactacgc ctggctgctg cgtgacagcg aaaccggcgc
     2041 caccgcgatc gtcgatccgg ctgagggccc gccgatcatc gccgccatcg aagccgcggg
     2101 aggtcggctc gacatgatcc tgctaacgca tcaccacggc gatcacatcg ccgacgccga
     2161 tgtggtccgt gcccggtttc cgggttgcaa gatggtcggc gctgcggccg atgctcacag
     2221 gctgccgaaa ctggaccagg cggtgcggga gggcgacacg gtgcagcttg gcaacgcgac
     2281 cgcccgcgtc atcgacacgc ctggccacac tgtgggccag ataaactatt tcttccccgg
     2341 cgggccgatc ctgctgtccg gcgacacact gttcagtctg ggctgcggcc ggctgatcga
     2401 aggcgacgcg aagcaaatgt tcgccagcct gagcaagctc gccgcgctgc cggacgatac
     2461 gctggtgtgc tgcgggcacg aatacaccga agccaatgcg aagttcgccc tcagcgtcga
     2521 tccggacaac aaggcgctgc a
//
LOCUS       DATAVD010000636         3687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1548987, whole genome shotgun sequence.
ACCESSION   DATAVD010000636 DATAVD010000000
VERSION     DATAVD010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3687
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1548987"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..589
                     /locus_tag="VHX39_11915"
     CDS             <1..589
                     /locus_tag="VHX39_11915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991866.1"
                     /translation="HGVSFAGLAVLSLIAYLPLLIAFGPSRWFAWGPFAIQASRVLLY
                     AAYFFVGIAMGPAIRVQGRRPVILAVGLFALLLAVQICRLHVPLLVPRLAWLVLYGVT
                     FALFCAAATRAAVALFDGFERRYALWDSLSANSYGIYLLHYPFVLWGQYALLDADIGA
                     FPKAASVFTCALGLSWCGSATLRLAMRSIVGFRRL"
     gene            846..3002
                     /locus_tag="VHX39_11920"
     CDS             846..3002
                     /locus_tag="VHX39_11920"
                     /inference="COORDINATES: protein motif:HMM:NF024795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hint domain-containing protein"
                     /protein_id="HEX3991867.1"
                     /translation="MATTTITGSGSVFKNSANGGTFVSTGTSNVGVNAAHAIYLYGAN
                     DILTNSGAFTGIYLDGANAAVTNLSSGYIGPSPSGVHDGLFLQNGGSVINYGTIIGGE
                     YGGFGVRITNITFAAANYLSNASTGTIVGGVYMYSSIASALTVVNAGRITGGGNSTVG
                     YKGGAYLDEGGTIVNLASGVISAGNSNAGSNYGVRINFDPGTVINAGTISGGGSGPAV
                     SLGGYIGNRVVVDPGAVFNGKVNGGFIGSTGGAILELASGTNTGTVTAVGTNFYNFST
                     VQFDSGSQWLVTSPNTDFRVTGGNTSAASGIMFTGFSQGDTIDITGFTATSISTLGSG
                     KGIVLNSNATHITLQIPGTLAGGFQMTHGTFGTDITTICFCRGTMIDTPEGQVAVENL
                     VVGARVTTLGYNNTRIITWIGKGKVLATSGRRGAATPVIVRKGALADNVPDQDLHVTK
                     GHSLFIEGVLIPVEFLVNHKTIVWDDRAQEVEIYHIELDQHDVLLANGAPAESYRDDG
                     NRWLFQNAHSGWDLPPQEPYAPVLTGGPVVDEVWHQLLERAGVTELPPLTDDADLHLI
                     VDGVRIDARERTDGVHFFHLPSQPKSVIIGSRAAVPAELGFVRDPRCLGAALRRVTIR
                     QGAKFMLIDADDERLTAGFHDYEAAENIRWTDGYGELPIQAFARFDEGGEVAVHLGGS
                     TWYPDYRDEAGTQAGDTGASTFGTGVADDRNFASAA"
     gene            complement(3298..>3687)
                     /locus_tag="VHX39_11925"
     CDS             complement(3298..>3687)
                     /locus_tag="VHX39_11925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991868.1"
                     /translation="ENATGMISAAYLKDPTDPSWKNDAGMNQWRAFMGKYMPGADLTD
                     GGTVFGYGVTMCLWQVLKQCGTDFSRANIMKQAASLQDLEIPVLLPGIKINTSASNFH
                     PIRQMQLTRWTGKHFELFGKVLAGEAT"
BASE COUNT          664 a         1079 c         1182 g          762 t
ORIGIN      
        1 ccatggagtc tccttcgcgg ggttggcggt gctgtcgctg atcgcctatc tgccgctgct
       61 gatcgcgttc gggccgtcgc gctggttcgc ctggggcccg ttcgcgatcc aggcgagccg
      121 cgtcctgctg tatgccgcct acttcttcgt gggcattgcg atggggccgg cgatccgcgt
      181 ccagggacgg cggcccgtga tcctggcggt ggggttgttc gccttgctgc tggctgtaca
      241 aatctgccgg ttgcatgtcc ctctgctggt gccgcgtctt gcctggctcg ttttatatgg
      301 ggtgaccttt gccctgttct gtgccgcggc aacccgagcg gcggtggcgc tgttcgacgg
      361 gttcgaacgg cggtacgcac tgtgggacag cttgagcgcg aattcttatg ggatttatct
      421 gctgcactat ccgtttgtct tatggggtca gtatgcgctg ctggatgcgg atattggcgc
      481 gtttcccaag gcggccagcg tatttacttg cgcattggga ttgagttggt gcggttcggc
      541 cacgttacgc ctggcaatgc gctcaatcgt tggcttccga cggttgtagc tcgacgccga
      601 ttcgcaccgc gtcgccatct gcaaagactg cttccatatc catgcgcaac ggcaaagtag
      661 gcttctgctg gaatgattat cggtacggca gaaaacagat gacgcggacc ccggcggggg
      721 actgattgga tagggatgaa tgaaacgaaa ctataacggt ctgctttttt tgttgacgcc
      781 cccgcttttt ttgcaggtag tagtcagtct gggacatact cgccgcagaa gaaagatcga
      841 gtctgatggc aaccacgacg ataaccggct caggctccgt attcaaaaac tcggccaatg
      901 gcggaacgtt cgtcagtacc ggcaccagca atgttggggt taacgccgct cacgcgatct
      961 atctgtacgg cgccaacgac attctaacga atagcggggc attcaccggg atctatctcg
     1021 acggagcgaa cgcagccgtc accaatctca gttccggtta tatcggcccg tcgcccagtg
     1081 gcgtgcatga tggcctgttc ctccaaaatg gcggatcggt catcaattac gggacgatca
     1141 ttggcgggga gtacggcgga ttcggtgtac gtataaccaa tataactttt gccgcggcga
     1201 attacctcag caatgccagc accggcacca tcgtcggtgg tgtttacatg tattcgtcga
     1261 tagccagcgc gctgaccgtg gtcaatgccg gacgcatcac cggcggtggc aacagtactg
     1321 tcggttataa gggcggcgct tacctggacg agggtgggac catcgtcaac ctggcgagcg
     1381 gggtcatctc ggcaggcaat tcgaacgccg gcagcaatta tggcgtcagg atcaatttcg
     1441 accccggcac cgtcatcaac gcgggtacga tcagcggcgg cggcagcgga cccgccgtgt
     1501 cgcttggcgg ctatatcggc aatcgtgtcg tcgtcgaccc gggcgcggtg ttcaacggca
     1561 aagtcaacgg cgggttcatc ggcagcactg gaggcgctat ccttgagctg gccagcggta
     1621 ccaacaccgg gaccgtgacc gccgtgggga cgaatttcta caacttcagc acggtgcagt
     1681 tcgattccgg gtcgcagtgg ctggtgacca gcccgaatac ggatttcagg gtcaccggag
     1741 gcaatacctc ggctgcctcc gggatcatgt tcaccggctt cagccagggc gatacgatcg
     1801 acatcaccgg gttcaccgct acctcgattt cgaccctggg gagcggcaag ggaatcgtgc
     1861 tgaacagtaa tgccacgcac atcacactgc agatccccgg aacgctggcc ggcggctttc
     1921 agatgaccca tggcacgttc ggtaccgaca tcacaacgat ctgcttctgc cggggcacga
     1981 tgatcgacac gccggagggg caggtcgcgg tcgaaaacct cgtcgtcggt gccagggtca
     2041 caacgctggg ctacaacaac acacggatca taacctggat cggcaaaggc aaggttctgg
     2101 ccaccagcgg tcgacgcggc gccgcgacac cggtcatcgt gcgcaagggt gcgctggcgg
     2161 acaacgtgcc ggatcaggat ctgcacgtga ccaaggggca ctcgctgttc atcgagggcg
     2221 tgctgatccc agtggagttc ctggtgaacc acaagaccat cgtgtgggat gacagagcac
     2281 aggaagtcga aatctaccac atcgagctgg accagcacga cgtgctgctg gccaacggcg
     2341 caccggccga gagctaccgc gacgacggca atcgctggtt gttccagaac gctcactcgg
     2401 ggtgggatct gccgccgcag gaaccttatg ccccggtgct gaccggcggg ccggtggtcg
     2461 atgaggtgtg gcaccaactg ctcgagcgcg ccggcgtgac cgagttgccg ccgctgactg
     2521 acgatgcgga tctgcatctg atcgttgacg gcgtgcggat agatgccagg gaacggacgg
     2581 atggggtcca cttcttccat ctgccgtcgc agccgaagag cgtcatcatc gggtcccgcg
     2641 ccgcggtgcc ggcggagctg gggttcgtcc gcgacccgcg ctgcctgggc gcggcgctgc
     2701 ggcgtgtcac gatccggcag ggcgccaagt tcatgctgat cgatgcagat gacgaacggt
     2761 tgaccgctgg gttccacgac tacgaggcag cggaaaatat ccgttggacc gacggctacg
     2821 gggaattgcc gatccaggcg tttgcccggt tcgacgaagg cggcgaggtg gcggtccacc
     2881 tgggtggttc gacgtggtat ccggattacc gcgatgaggc cgggacacaa gcgggcgata
     2941 ctggcgcttc tacgtttggc acgggagttg ctgacgatcg caacttcgca tcggccgcat
     3001 agcgcgccgg cacgtgtagc cgggccgatg cagcgcacgc tttttaaggc ggctctcgac
     3061 gtagccacga tagacccggc attccggccg gaggcgattt tcgcatgtgt ccaccaatct
     3121 ggtcgcgatt gccgagggtt ccgccggtca ttgccaccag cgcggttccg tcaaattcgt
     3181 agcgcaattc ctggcggcgt tcccacgcca ggaattggtc caccgtcatc ggccgccgct
     3241 gtgcgatgct cgtgccgacg aggatggcac aatcggtatt gcggcgtgta ttgcgatcta
     3301 tgttgcctcc ccggccagca cctttccgaa cagttcgaaa tgcttcccgg tccagcgggt
     3361 tagctgcatc tgccggatgg gatggaagtt ggaggcgctg gtgttgatct tgatgcccgg
     3421 cagcagcacc gggatttcca ggtcctgcag gctggcggcc tgcttcatga tattggctcg
     3481 ggagaaatcg gtgccgcact gtttcagcac ctgccacagg cacatcgtta cgccgtagcc
     3541 gaacaccgtg ccaccgtcgg tcaggtcggc gcccggcatg tacttgccca tgaacgctcg
     3601 ccactggttc atccccgcat cgttcttcca gcttgggtcg gtggggtctt tcagataggc
     3661 cgcgctgatc atgccggtgg cgttctc
//
LOCUS       DATAVD010000637         1545 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_989077, whole genome shotgun sequence.
ACCESSION   DATAVD010000637 DATAVD010000000
VERSION     DATAVD010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_989077"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..272)
                     /locus_tag="VHX39_11930"
     CDS             complement(<1..272)
                     /locus_tag="VHX39_11930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991869.1"
                     /translation="MTNSHVELPGSRRPLAHGARRVREIDPHTHVEVTLMLNAPPLPG
                     TDEMPDKPLTAAELTHRFGASPHDIRKVEDTLRSYGLHVEGLGFSGR"
     gene            complement(569..826)
                     /locus_tag="VHX39_11935"
     CDS             complement(569..826)
                     /locus_tag="VHX39_11935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991870.1"
                     /translation="MRHDVLLVFCIPAVFVAIVLGFSMAVYAWDQFGLIPALLSPVLA
                     WFGARTLARRYTQRDLLIAIYLVWAVGLVAALLAIGFPDRA"
     gene            complement(908..>1545)
                     /locus_tag="VHX39_11940"
     CDS             complement(908..>1545)
                     /locus_tag="VHX39_11940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aspartate dehydrogenase"
                     /protein_id="HEX3991871.1"
                     /translation="FAELEEADIVVEAVPAALFERVAMPAIEAGRIFVPCSVGALLPR
                     LHLVKRAQQTGARIVVPTGALLGLDAVRAAAEGRIDSVTIETRKPPASLIGAPYLRKH
                     GYDMLDVTMPLRVFAGNARDAALGFPANVNVAAALALAGIGPVRTKVEIWADPALSRN
                     VHIIRVEAEAARFTMRIENEPTEENPRTGKITPLSVVACLRGLVSPLKVGS"
BASE COUNT          325 a          484 c          470 g          266 t
ORIGIN      
        1 cggccgctga agcccaggcc ctcgacgtgc aaaccgtagg agcggagggt gtcttcgact
       61 ttgcggatat cgtgcggcga cgcgccaaag cggtgggtga gttcggcggc ggtcaatggt
      121 ttgtccggca tctcatcggt accgggcagc ggcggggcgt tcagcatcag agttacttcg
      181 acgtgtgtgt gcggatcgat ctcgcgtacc cggcgcgcac cgtgcgccaa tgggcgacgg
      241 ctacccggca gttcgacatg cgaattggtc attttggccc ccataagtcg acagtggcgt
      301 tcgcgtcggc acaagtcgtc cgaatcaggc cgtccgaccg aggtcgcgac gccgaaccgt
      361 cgtaggcttc gccccttgtt cacgatgcag cggcgcaaga cccttgtgtc agcgcgttgg
      421 tagagctcat ttccatcacg tcggctgtga catatatcac aagttcagca aacgtcatcg
      481 aattgccgtc ctgcgatttt ggcgatcgag cgtagtacgc ggaagcgcaa tcctgtcaaa
      541 accagctgag ccaccatatc caaagcaatc acgctctgtc gggaaacccg atcgcaagca
      601 acgcggcaac aagtccgaca gcccagacca aataaatggc gatcagcagg tcacgctggg
      661 tgtaacggcg tgccagcgtc cgagcgccaa accaggccag caccggactg agcagtgcag
      721 gaatcaggcc gaactgatcc caggcgtaaa ccgccatgga aaaccccagc acgatggcaa
      781 cgaatactgc cgggatgcag aacaccagca gcacatcgtg ccgcattcgc gcggtcgcca
      841 gcaccaccag ccagaacaac gtaactgtga cgaaataaac cggaccctca aggatcagcg
      901 gcagcgatca gctccccacc ttcagcggtg agacgaggcc tcgcagacag gcgaccacgg
      961 aaagcggcgt gatcttgccg gttctcggat tttcttctgt tggttcattt tcgatgcgca
     1021 tggtgaaacg agccgcctca gcctcgacgc gaatgatgtg cacgttgcgg gacagcgcag
     1081 ggtcagccca gatctcaacc ttggtgcgta ccgggccgat gccggccaaa gcaagcgcgg
     1141 cggcgacatt gacgttggcg ggaaacccca gtgctgcatc gcgggcattg ccggcaaaca
     1201 cccgcaacgg catcgtaaca tccagcatgt cgtagccatg ctttcgcaga tacggcgcgc
     1261 cgatcagcga ggcgggcggc ttgcgcgttt cgatcgtgac actgtcgatc cggccctcgg
     1321 ctgctgcgcg cacggcatcc aggccgagca gggctccggt cggcaccacg atccgcgccc
     1381 cggtctgttg cgctcgtttt accagatgca gtctgggcag caacgcgcca accgagcagg
     1441 gaacgaaaat gcgtcccgcc tcgattgcag gcatggccac gcgttcgaac agggcggccg
     1501 gcactgcctc gacgacgatg tctgcctcct ccagttcggc gaagt
//
LOCUS       DATAVD010000638         1851 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3410547, whole genome shotgun sequence.
ACCESSION   DATAVD010000638 DATAVD010000000
VERSION     DATAVD010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3410547"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1071)
                     /locus_tag="VHX39_11945"
     CDS             complement(<1..1071)
                     /locus_tag="VHX39_11945"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEX3991872.1"
                     /translation="MAQEAATRRQVSESERLRAMQVDAQSAATEKAAQAMADEKRLTA
                     EQSAALDRLRHADAAVNEASQHLQDLNRRRDGAQSRIDHMVSALAPVVPVILRMSTYP
                     VETLLGAQVPAEDSVRGVLVMRAIAHQAEIDAHSLIEDRAALESATKAAAEVTPQLAA
                     ARAARSAEADALAQQLAATVVRRKTAEQDATDAAHRAAAEAARAVSLRSMLEILETQR
                     RLEEAQAREDELRAQREQKDAAAEAARVRQAAVSQPTGVGTLTADAKPAGQIVQPVAG
                     TLVRSWGDPLDGEPATGQSWQTAPGARVVAPCNGTVAFAEPFRGYGLLLIIDCGGGYH
                     AILAGLDQIQVGPGKAVLGGDPV"
     gene            complement(1214..>1851)
                     /locus_tag="VHX39_11950"
     CDS             complement(1214..>1851)
                     /locus_tag="VHX39_11950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEX3991873.1"
                     /translation="LNDILGSVVADAGKSQLRMAETEKFAHVTYFLNGGQETLFRGED
                     RILVQSPKVATYDLQPEMSAPELTDRAVQAIDSGKYDMIVLNYANPDMVGHTGDLKAA
                     IKAVETVDTGLGRIVEALRRQGGALIVTADHGNCELMKDPATGGPHTSHTTNPVPVVV
                     MRGAAAGGFGGISDGSLADVAPTILDLMDVPVPREMTGHSILQKDAAPAAE"
BASE COUNT          287 a          621 c          591 g          352 t
ORIGIN      
        1 gaccggatcg ccacccagta ccgcctttcc gggaccaacc tgtatctggt ccagaccggc
       61 gagaatcgcg tgataaccgc cgccgcagtc aatgatgagc agtaatccgt aaccacggaa
      121 tggttcggcg aacgcgacgg tgccgttgca tggcgcgact acccgggccc cgggcgcggt
      181 ctgccaggac tggccggtgg ccggctcgcc atccagcgga tcgccccaac tgcgcaccag
      241 cgtaccggcg accggctgaa cgatctgacc cgccggcttg gcgtcggcag tgagagtgcc
      301 cactccggtg ggttggctca ccgccgcctg ccgcacccgg gcggcctctg ccgcggcgtc
      361 tttctgctcg cgctgcgccc gcaattcatc ctcacgcgcc tgcgcctctt caagccgccg
      421 ctgggtttcg aggatctcca gcatggagcg caaactgact gcccttgcag cttctgccgc
      481 ggccctgtgg gcggcatcgg tggcgtcctg ttcggcggtc ttccgacgta cgacggtcgc
      541 ggcaagctgt tgcgcgagag catccgcttc agcagaccgt gcggccctgg cggcggccag
      601 ttgcggtgtc acctcggctg ccgccttggt cgcggactcc agcgcagcgc gatcctcgat
      661 cagcgagtgc gcgtcgatct ctgcctgatg ggcaattgct cgcatcacca ggacgccgcg
      721 caccgagtcc tcagccggga cctgggcgcc aagcaaggtc tcgaccggat aggtcgacat
      781 gcgcaggatg accggcacca cgggggcgag tgccgaaacc atatggtcga tgcggctttg
      841 cgcgccgtcg cggcgccggt tcaggtcctg caggtgctgc gatgcctcgt tcaccgccgc
      901 gtcggcgtgc ctgagccggt cgagcgctgc gctctgttct gcggtcagtc gcttttcgtc
      961 cgccatcgcc tgggccgcct tctcggtggc agcgctctga gcatcgacct gcatggcacg
     1021 caagcgttcc gattcgctga cctgacgcct tgtggcggct tcctgtgcca aggcattcgt
     1081 atcagggaca ggcacgctcc cgatgccgga tggctgagtc tgggtcgtgt tgggcctggc
     1141 gtccagccca gtacgttgtg cccaagccgg ccaacctggc actgttgcgg atagcaacag
     1201 tacgcccaga aggttattcc gccgccggcg cagcatcttt ttgcaaaatc gaatggccgg
     1261 tcatctcccg cggaaccggg acgtccatga ggtcgagtat ggtcggcgcg acatctgcca
     1321 gactgccgtc gctgatgcca ccgaacccgc cggcggcagc gcctcgcatg accacgaccg
     1381 ggaccgggtt ggtggtgtgg gaggtatgcg ggccgccggt tgcggggtct ttcatcaact
     1441 cgcagttacc atgatccgcc gtaacgataa gagcaccgcc ctggcgtcgc aacgcctcga
     1501 cgattcggcc aagcccggta tcgacggttt caaccgcctt gatggcggcc ttcagatccc
     1561 cggtgtgccc gaccatgtcg ggattggcat aattgagcac aatcatgtcg tacttgccgc
     1621 tgtcgatcgc ctgtaccgcg cggtcggtca attccggcgc cgacatttcc ggctgcagat
     1681 cataggtggc gactttcggc gattggacca aaatccggtc ctcgccacgg aacagcgttt
     1741 cctggccgcc gttcaggaaa tacgtgacat gggcgaactt ttccgtctct gccatgcgga
     1801 gctggctctt gccggcgtca gcaacgaccg agcccagaat gtcgttgagc g
//
LOCUS       DATAVD010000639         3386 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2665401, whole genome shotgun sequence.
ACCESSION   DATAVD010000639 DATAVD010000000
VERSION     DATAVD010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3386
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2665401"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..438)
                     /locus_tag="VHX39_11955"
     CDS             complement(<1..438)
                     /locus_tag="VHX39_11955"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3991874.1"
                     /translation="MRRRDLLKATPLLMTPAIARAAALPLRFIPSANLSTLDPIWTTA
                     LVAQAHGYLIYDTLYGIDAAGDLHPQMCAGHDISADELTWTFTLREGLLFHDGDKVLA
                     RDCVMSLRRWASRDSFGQQMMATANEIAVVDDKHFTVRLKKPFR"
     gene            complement(780..1460)
                     /locus_tag="VHX39_11960"
     CDS             complement(780..1460)
                     /locus_tag="VHX39_11960"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010666251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3991875.1"
                     /translation="MSQTLEARVRSRRLPGATPEVALDAAAIRDAYRRWSSIYDVAFG
                     GVSSFARKRAAVVVNRLPGRTVLEVGVGTGLALPRYAPEKRIVGIDLSADMLALARRR
                     VAKHGLRNVEGLLEMDAEATEFADGQFDTAVAMFVASVVPNPRRMLAELRRVVRPGGT
                     ILLVNHFAAEGGPRWWVERAMAPASRRLGWHPDFAMRALFESEEIAGIDRGPMPPFGI
                     FTRVRLRN"
     gene            complement(1819..2028)
                     /locus_tag="VHX39_11965"
     CDS             complement(1819..2028)
                     /locus_tag="VHX39_11965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010501677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX3991876.1"
                     /translation="MPTGTVKWFNATKGYGFIGPEAGGKDIFVHISAVQKAGMRTLNE
                     GQKLAFEIEQQANGRAAAVNLAESG"
     gene            2362..2607
                     /locus_tag="VHX39_11970"
     CDS             2362..2607
                     /locus_tag="VHX39_11970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0043953 - protein transport by the Tat
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HEX3991877.1"
                     /translation="MGGLSIWHWMLVLLVVLLLFGGNKMSGLMGDFAKGIKAFKKNMA
                     EPDDASMEDSAGKPAGTITGPGTETAARTTRETTSAR"
     gene            2760..>3386
                     /locus_tag="VHX39_11975"
     CDS             2760..>3386
                     /locus_tag="VHX39_11975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEX3991878.1"
                     /translation="MAMHRLAASPETVRWGTFDATYAALLTINSGDTIELECVSGAPE
                     VMPPAGSGMVVPPALAAIHASNIPRAGGHILTGPVGVAGAEPGDMLEVRIDKIEVGND
                     WGYCGFRPLAGTLPEDFPDRYLSHIPVDRTRGTCRLPWGTELTLAPFFGVMGVAPPPR
                     YGTISTIQPREHGGNLDNKELTAGSILYLPVWAEGARFSAGDGHGVQGD"
BASE COUNT          623 a         1103 c         1044 g          616 t
ORIGIN      
        1 ccgaaacggc tttttcagcc gcaccgtgaa atgcttgtcg tccactacgg cgatttcatt
       61 cgctgttgcc atcatttgct ggccgaacga atcgcgcgaa gcccagcgac gaagcgacat
      121 tacgcagtcg cgcgccagga ccttgtcgcc gtcatgaaac agcagacctt cgcgcagggt
      181 gaatgtccag gtgagctcgt cagccgagat gtcatggccg gcacacatct gcggatgcaa
      241 atcgccagcc gcatcaatcc cgtaaagcgt gtcgtagatc agataaccat gcgcctgggc
      301 caccaaagcg gtcgtccaga tcgggtcgag cgtggagaga ttggcgctcg gaatgaaccg
      361 caacggcagc gcagcggcgc gcgcaatcgc gggggtcatc agcagcggtg tggcctttaa
      421 cagatcgcgg cgacgcatgg tacctccctg actttatttc ttgctttttc ggacgttcgt
      481 tacggcttgc cggtcggcgt gcgctgcttg cgtcacgcac gtcgccggcc cggcagtggc
      541 gacgctagca cgccgatcta tccgcgagaa tgacgaacgg cggcgttaaa tggggctggc
      601 tgccggcgat tcccacgcac gagcatctga tctgtaccgc gtcatactgc acgcgaagcc
      661 aataccccgt gcgtggccag tcgggaaatc accgaagcgt actggatggg aaacgacgcc
      721 agatcgccga tcggcgtcag cgtagcaaca cgaaggcccc gatcagcgaa ccggactgct
      781 tagttccgca gccgaacgcg agtaaaaatc ccgaacggcg gcatggggcc gcgatcgatc
      841 ccggcgattt cctcggattc gaacaacgcc cgcatggcga agtccggatg ccagcccagt
      901 cgccgggacg ccggcgccat cgcgcgttca acccaccatc ggggcccgcc ctcggcggcg
      961 aagtgattga ccagcaggat ggttccgccc ggccgtacca cgcgccgcag ctcggccagc
     1021 attctgcgcg ggttgggcac caccgaagcc acgaacatcg cgactgccgt gtcgaactgc
     1081 ccgtcggcaa actccgtggc ctcggcgtcc atttccagca ggccttcgac gttgcgcaag
     1141 ccatgtttgg cgacgcggcg gcgggcgagg gccaacatgt cggccgacag atcaatcccg
     1201 acgattcgct tttcgggcgc gtagcgaggc aaggcgaggc cggtaccgac gccgacctcc
     1261 agcaccgtcc ggccaggcaa ccggttgacc accaccgccg ctcgcttccg cgcgaacgag
     1321 gaaacgccgc caaaagcaac atcgtagatc gaagaccatc gccggtaagc gtcccggatc
     1381 gcggcggcgt ctagtgcgac ctcaggtgta gcgcctggca ggcgtcgcga gcggacgcgt
     1441 gcttccaggg tttgactcat ggcgtcccgt ccccgttacg aaacctgcct agttcacgaa
     1501 agtgcaacat gcaagccctg gttgcggctg atggacaggc gtagccgccc acgcccccgc
     1561 ccatgggaca tggtggaccc tccccgatca cccgggccca atcacctggg cctgattgcc
     1621 tggcccaggc tgcaaacgcg caaagcccgg atccagaacg cccgcgagtt ccatcccgag
     1681 ggaagtccgc ccccaccgaa atgttccccg cagtcagcca ccccaggatc gaaagttcac
     1741 cctggaaacg ctcccccgga aacgcccttg ccggaatcgt ttcccctgaa atcgtttccc
     1801 gggcgccgcc agccgtggtc agcctgactc ggccaggttt accgcggcgg cacggccgtt
     1861 ggcctgctgt tcgatctcaa acgcaagttt ctgcccctcg ttcagtgtgc gcatgcccgc
     1921 tttctggact gcgctgatat ggacaaagat atctttgccc cctgcctccg ggccgatgaa
     1981 gccgtagcct ttggttgcat tgaaccattt tacggtgcct gtgggcatcg tcttcccgcc
     2041 tttccggtcg cgggtggtcc gttcaggacc tccagccaga ccaccctgtt gcacaggggc
     2101 gcgacggcga accgcgacgc cctcccttgg gaacagttcc ggcgttattc aggctgccga
     2161 aatatgtctc cgcgatgacg ataacctttc attggactga cggcaacgct gttcattgga
     2221 cttttggcaa cgccgttcag ttcatctttg ccgggaatcg tgacagcctc tcacacgaac
     2281 ccgcttgcat cgcggtgcgg accgggccat gtgtgcgggc agggtcccaa caccggtggt
     2341 cgtggttgga cggaggattg tatgggcggc ttaagcatct ggcactggat gttggtgcta
     2401 ttggtcgtgt tactgctgtt cggtggtaac aagatgagcg gtttgatggg cgatttcgcc
     2461 aagggcatca aggcgttcaa gaaaaacatg gcagaacccg acgatgcttc gatggaagac
     2521 agcgcgggca agccggccgg tacgattacc gggccgggga ccgagacggc ggcccgcaca
     2581 acgcgtgaga cgacgtccgc gcgctgattg gactgcgctg atccctgtcc ctagggtgcc
     2641 gcattttaac gatcggtagt gcctggcgat ggccaccttg ctcgcgtgag cgtgggcttc
     2701 tccgtcttgc gacccggtca gcaacggtct tagctgcatc gcaacacagg agatccacaa
     2761 tggcgatgca tcgtctggcg gccagcccgg aaacggtccg ttggggcacg ttcgacgcga
     2821 cctacgcggc tctgctcaca atcaattccg gcgatacgat cgagctggaa tgcgtctccg
     2881 gcgcgcccga agtgatgccg cctgcgggct ccggcatggt agttccgccg gccttggcgg
     2941 caattcacgc atcgaacatt ccccgggccg gcggtcatat cctgaccgga cccgtcggtg
     3001 tggcaggtgc ggagccaggc gacatgctgg aagtccgcat cgacaaaatc gaggtgggca
     3061 atgactgggg ctattgcggc ttccgcccgt tggccggcac gctgcccgag gattttcccg
     3121 accgctattt gagccatatc ccggtcgacc gcacacgcgg cacctgccgt ctgccctggg
     3181 gcaccgaact cacgctggcg ccgtttttcg gcgtcatggg cgtggccccg ccaccgcgct
     3241 acggcacgat ctcgaccatt cagccgcgcg agcacggcgg caacctcgac aacaaggaac
     3301 tgaccgccgg ctccatcctg tatctgccgg tgtgggctga gggtgccagg ttctccgccg
     3361 gtgacggcca cggcgtgcag ggcgac
//
LOCUS       DATAVD010000640         2324 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2480553, whole genome shotgun sequence.
ACCESSION   DATAVD010000640 DATAVD010000000
VERSION     DATAVD010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2324
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2480553"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..756
                     /locus_tag="VHX39_11980"
     CDS             <1..756
                     /locus_tag="VHX39_11980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3991879.1"
                     /translation="QYLHWMGRVLHGDLGYSWRTRQPVLALIETKLPVTLQLSVMAFA
                     FAVAIGVPAGIVAAVQRNRFWDYLANAIGLAGLSTPTFWLGILLILLVSVDLGWLPPS
                     GYVPLTEDWRQSLATTIMPAFVLGNAIAAVLMRHTRAAMLTALDQDYVRTARAKGLAE
                     SRVVLRHALRNALIPVVTLGALELGTLLSGAVLTEQVFSIPGFGKMIVDAVFNRDYPV
                     VQGVVLVTALLYVMLNLLADMLYVVINPRLRGS"
     gene            753..1517
                     /locus_tag="VHX39_11985"
     CDS             753..1517
                     /locus_tag="VHX39_11985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3991880.1"
                     /translation="MTERFYRLAPTLFGILAVVLWEAAVRIFDVPVYLVPGPLAVVAA
                     FLQDPRGLLLALGSTLLVTFAALVASAVMGGAMAVAMSASRLAQAAIQPWAVVLQVTP
                     IVAIAPLIIVWVGDPFASLVVCAMIVAFFPVFANTATGLASAPPELSDLFRLYGGSRW
                     RTLTLLRLPAALPYFLAGLRISGGLALVGAVVAEFVAGSGGFASGLAYRILEAGYRLQ
                     IPRMFAALVLLSLTGIAINAGLGLFGRLILQSRGGA"
     gene            1514..>2324
                     /locus_tag="VHX39_11990"
     CDS             1514..>2324
                     /locus_tag="VHX39_11990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3991881.1"
                     /translation="MNTLLIFGLGYSGRAVADSAVDFIVAATTRSIDPSVGGNAVLQP
                     IVSQGAIDAQESQAAAPSRAIEMVPFAAAEAAIADATHILVTAPPGADGDPVLNRYAD
                     AIATAPALRWIGYLSSTVVYGDRGGAWVDEATPPAPSQPRGHRRLEAELAWSRFAARY
                     AIDLFRLAGIYGPGRSAFDDLRSGTARRMNKPGHQFGRIHRDDIGRAIAVAMQQMRDP
                     GVRVLNLVDDVPVESAAVVTEAARLLGLSPPPETAFADALPAMSPMARSFWA"
BASE COUNT          322 a          710 c          773 g          519 t
ORIGIN      
        1 caatacctgc actggatggg ccgcgtgctg cacggggatc tcggctattc gtggcgcacc
       61 cgccagccgg tcctggcatt gatcgagacc aagctgccgg tgacgctgca gctttctgtc
      121 atggcattcg cgttcgcagt ggcaatcggt gtgccggccg ggatcgtcgc tgccgtgcaa
      181 cgcaaccggt tctgggatta tctcgccaac gcaatcggcc ttgccggttt gtcgacgccg
      241 accttctggc ttggcatcct gctgatcctg ttggtatcgg tcgacctcgg ctggctgccg
      301 ccatccggct acgtgccgtt gacggaggac tggcggcaat cgctggcgac cacgatcatg
      361 ccggctttcg tactcggcaa tgcgatcgcc gcggtcctga tgcggcacac ccgcgcggcg
      421 atgctgaccg ctctggatca ggattatgtg cgcacggctc gcgccaaggg cctcgccgaa
      481 tctcgcgtcg tgctgcgtca tgcgttgcgc aatgcgctga tcccggtcgt gacgttgggc
      541 gcactggaac tcggcaccct gttgtccggc gcggtgttga ccgagcaggt gttctccatc
      601 ccaggattcg ggaagatgat cgttgatgcg gtgttcaacc gcgactaccc ggtggtgcaa
      661 ggcgtcgtgc tggttacggc gctgctgtat gtgatgctga atttgctggc ggatatgttg
      721 tacgtggtga tcaatcccag gctgcgcggt tcatgacgga acgattttat cgtctggcac
      781 caaccctgtt cgggatattg gccgtcgtgt tgtgggaggc cgcagtgcga attttcgatg
      841 tcccggtcta tctggttccc gggccgctcg cagtggtggc ggcgttcctg caggacccga
      901 gaggcctgtt gctggcgctg ggttcgacct tgctggtgac gtttgccgca ctggtggcct
      961 ccgccgtaat gggcggagcg atggcggtcg cgatgtccgc aagtcgcctg gcacaggcgg
     1021 cgatccagcc atgggcggtg gtgttgcagg tgacgccgat cgtggcgatc gctccgttga
     1081 tcatcgtttg ggtgggcgat ccgtttgcct cactggtggt gtgcgcgatg atcgtcgcgt
     1141 tctttccggt gttcgcaaat accgcaaccg gcctggcctc cgctccgccg gagttgtcgg
     1201 atttgttccg attgtacggc ggcagccggt ggcggacgtt gacgttgctg cggctccccg
     1261 cggcgttacc gtatttcctc gccggcctgc gcatttccgg gggcctggca ttggtgggag
     1321 cggtggtcgc cgaattcgtc gccggttcgg gcgggttcgc gtccggactg gcctatcgca
     1381 tcctcgaggc aggctatcga ttgcaaatcc cgcgcatgtt tgcggctctg gttttgctgt
     1441 cgctgacagg cattgcgatc aatgccgggc ttggattgtt cggccggctg atcctgcaat
     1501 cgaggggcgg ggcgtgaata cgctgctgat cttcgggctt ggttacagcg gtcgtgcggt
     1561 tgcagattcg gctgtcgatt ttattgttgc ggcaaccaca cggtcgatcg acccctccgt
     1621 tggcggcaac gctgttctgc aaccgattgt ctcccaaggc gcgatcgatg cgcaggaatc
     1681 acaggcagcg gcgccgtccc gcgcaatcga aatggtgccg tttgctgctg cagaagcggc
     1741 aatcgccgac gcgacgcata ttctggtgac cgcgccgcct ggtgccgacg gtgacccggt
     1801 gctgaaccgt tacgccgacg cgattgccac ggcgcccgcg ctgcgctgga tcggctacct
     1861 gtcgagcact gttgtttacg gcgaccgagg cggcgcctgg gttgatgaag caaccccgcc
     1921 ggcgccctcg cagccacgcg gacaccgtcg tctcgaggcc gaactggcgt ggtcccgctt
     1981 cgctgcacgt tacgccatcg acctgttccg gcttgccggc atttacggac cgggccgctc
     2041 ggcattcgac gatctgcgct ccggtaccgc tcggcgcatg aacaagcccg gccaccagtt
     2101 cggccgcatt catcgtgacg atatcggtcg cgcgatagcc gtcgcgatgc agcaaatgcg
     2161 ggatcctggc gttcgcgtgc tcaacctggt tgacgacgtt cccgttgaaa gcgctgcggt
     2221 cgtcaccgag gcggcgcggc ttctcggttt atcaccgcca ccggaaaccg cattcgctga
     2281 tgctctcccc gccatgagtc cgatggcacg cagcttctgg gcgg
//
LOCUS       DATAVD010000641         4149 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3597425, whole genome shotgun sequence.
ACCESSION   DATAVD010000641 DATAVD010000000
VERSION     DATAVD010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4149
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3597425"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2441
                     /gene="pheT"
                     /locus_tag="VHX39_11995"
     CDS             <1..2441
                     /gene="pheT"
                     /locus_tag="VHX39_11995"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019091623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEX3991882.1"
                     /translation="KTHLETEASVDEISSTLTRIGLELEGVENRGAAIASFRIAHVIE
                     AAPHPNADRLRACTVDTGDGIVSVVCGAPNARTGMKAVFAAPGSFIPGTNVTLKVGEI
                     RGVQSAGMLLSAREMGLGEDHSGIIELPSDAPVGVSYATYSGLDDPIIEISVTPNRGD
                     CFSVRGVARDLAAAGIGSLKPFQPGRITPSIDGGPRWQIDFPEACPWILGRAIQNVRN
                     SPSPRWLQDRLTAIGLRPINALVDVTNFFTIDLGRPLHVFDVDKLTGNVLTLRHGAGE
                     TLRALNGRDYVLDPDDCAICDAAGVQSIAGVIGGEATGCDETTRTVFVECALFDPVRI
                     ALTGRRHQIVSDARQRFERGLDPALMPVAIEAATAMILELCGGEPGPVTAAGAEPAWQ
                     RDATMRFSRISGLGGSDISADEAVASLERLGFAVRSRNTDEVTVAVPSWRNDVAAQVA
                     LDLSPSLSPEVAAKVAEGCAVIEPECDLIEEVLRLKGLDAVPAASLPRLAPVPLATLS
                     PKQQRTALARRTLAAQGLVECVTFSFMAAAEAALFGPTPEQLRLTNPIAADLDQLRPT
                     PIATLAMAAQRNAARGYPDLALFEVGPAFRTGVEHGQCLTAAGLRTGFTPRSWTGPAR
                     AVDATDAKADLFAVMAAAGVPLDALMVTPDAPGCYHPGRSGTVRQGPKTVLGTFGELH
                     PRVLAAIGLSGSAVAFELNLDAVAEPKRRRKAPLDLPAFQPLRRDFAFLVDTHVTADA
                     VLRAARGAERNLIVGVTLFDLYEGDKLPQGKKSLAIEVVFQPREHTLTDAEIEVAAQK
                     VVAAVAKATGAVLR"
     gene            2856..3257
                     /locus_tag="VHX39_12000"
     CDS             2856..3257
                     /locus_tag="VHX39_12000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX3991883.1"
                     /translation="MPITKGYKQLLAEANALVETLTPAQAIAEFGKDDVVFVDLRDPR
                     ELDREGRMPGAFPCTRGMLEFWIDPESPYAKPVFAEDKRFIFFCAGGWRSALAAKTAQ
                     EMGLENVAHVEGGFGAWKQAGGPADPPKPRT"
     gene            complement(3262..3777)
                     /locus_tag="VHX39_12005"
     CDS             complement(3262..3777)
                     /locus_tag="VHX39_12005"
                     /inference="COORDINATES: protein motif:HMM:NF022607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2939 domain-containing protein"
                     /protein_id="HEX3991884.1"
                     /translation="MRTKWPVLAMCMVLGAGYFGYPYATLYRLDTAMRQSDASTLRSL
                     VDWYAVREGLKEDICDMVLDEPANARPSNELAPFGSGFVRGMAGNAVDHTVTPETLVS
                     MIRTSDAKVPAEARVAWAFFENPLQFSVELRAVGLAQPIRLVMELQGLSWKVRRIWLP
                     NALLERAGSGT"
     gene            complement(3872..>4149)
                     /locus_tag="VHX39_12010"
     CDS             complement(3872..>4149)
                     /locus_tag="VHX39_12010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="diaminopropionate ammonia-lyase"
                     /protein_id="HEX3991885.1"
                     /translation="LLAWQELERSATAFMAIPDDAAIDTMRFLAGHGIVAGESGVAGL
                     AAARLAMADPDAAAALDLGAESRVLVFGTEGATDTLLYESFIHFAAD"
BASE COUNT          759 a         1317 c         1320 g          753 t
ORIGIN      
        1 tgaagacgca ccttgagacc gaggcctcgg tcgacgagat ctccagcacg ctgacccgga
       61 tcggactgga actggaaggc gtggaaaatc ggggcgccgc gattgcgtcg ttccgcattg
      121 cgcacgtgat cgaggcagcg ccgcatccca acgccgaccg cctgcgcgcc tgcacggtgg
      181 acaccggcga cgggattgtt tcggtcgtgt gcggcgcgcc aaatgcgcgg accggaatga
      241 aggccgtgtt cgccgcgccc ggcagtttca tcccgggcac caacgtgacc ctgaaagtcg
      301 gagaaattcg cggcgtgcag agcgccggca tgctgctctc cgcccgcgaa atgggactgg
      361 gcgaggatca ttccggcatc atcgaactgc cgtccgatgc tcccgttggt gtgtcctacg
      421 caacgtattc cgggcttgac gatccgatca tcgagatcag cgtgacgccg aatcgcggcg
      481 attgcttcag cgtgcgtggt gtcgcccgcg atcttgccgc cgccgggatc ggttccctga
      541 agccgtttca acctggcagg atcacaccgt caatcgatgg cggcccgcgc tggcagatcg
      601 acttccccga ggcctgccct tggattttgg gtcgcgccat ccagaacgtg cgaaattcgc
      661 catctccgag atggttgcag gacaggctga ccgcgatcgg gttgcggccg atcaatgcgc
      721 tggtcgatgt aacaaatttc ttcaccatcg atctcggccg gccgctgcat gtgttcgacg
      781 tcgacaagtt gacgggcaac gtgctgacgt tgcggcacgg tgctggcgaa acgttgcggg
      841 cattgaacgg acgcgactac gttctggatc ccgacgactg tgcgatctgc gatgccgccg
      901 gcgtgcaatc gatcgccggc gtgatcggcg gcgaggcgac aggctgcgat gaaaccacgc
      961 gcaccgtatt cgtggaatgt gcgctgttcg atccggtacg gatcgcgctg accggacggc
     1021 ggcaccagat cgtctcggac gcgcggcaac ggttcgaacg cggcctcgat ccggcgctga
     1081 tgccagtcgc gatcgaggcc gccactgcca tgattctcga attatgcggc ggcgagcccg
     1141 gcccggtcac cgcagccggc gcagaaccgg cctggcaacg tgacgccacc atgcgcttct
     1201 cgcgcatctc tggactgggc ggatcggaca tttccgccga cgaggcagtt gcgtcgctgg
     1261 aacggcttgg tttcgcggtg cgctcgcgca atactgacga agtaacggtc gcggtgccgt
     1321 cctggcgcaa cgacgtcgcg gcacaggtcg cgctcgatct gtcgccgtcg ttgtcgcccg
     1381 aggttgcggc gaaggtggcc gaaggctgtg ccgtcatcga accggaatgc gacctgatcg
     1441 aggaggtgct gcggctcaaa gggctcgacg ctgtgccagc ggcatcgctg cctcggctgg
     1501 caccggtgcc gctcgcgacg ctgtcgccca aacagcagcg cacggcgttg gcccgccgca
     1561 ctctggccgc acagggcttg gtggaatgtg tgacgttcag tttcatggcg gcggcggagg
     1621 ctgcgttgtt cggcccaacc ccggaacagt tgcgcctgac caatccgatt gccgcggatc
     1681 tggatcagtt gcgccccacg ccgatcgcga cgctggctat ggcagcgcaa cgtaatgctg
     1741 cacggggcta tcctgacctc gcgctgtttg aggttgggcc ggctttccgg accggcgtcg
     1801 aacatggcca atgcctgact gcggcgggcc tgcgcaccgg ctttacgcct cggtcctgga
     1861 ccgggccggc acgggccgtg gatgcgacgg atgccaaagc cgatctgttt gccgtcatgg
     1921 cggccgccgg cgttccattg gacgcgctga tggttacgcc ggatgcaccg ggttgctatc
     1981 atcccggccg ctccggcacc gtgcgacagg ggccaaagac tgtcctcggg acgttcggtg
     2041 aactgcatcc aagagtgctg gcggcaattg ggttgagtgg atcggccgtg gcattcgagt
     2101 tgaacctgga tgcggtcgcg gaaccgaagc gccgacgcaa ggcgccgctc gatctgccgg
     2161 cgtttcagcc gttgcggcgc gactttgcgt tcctggtgga tacccatgtc accgccgatg
     2221 cggtgctgcg ggcggctcgc ggcgccgagc gcaatctgat cgttggagta acgttgttcg
     2281 acctgtatga gggcgacaag ttgcctcagg gcaagaagtc gctggcgatc gaggtggtgt
     2341 tccagccgcg cgagcacact cttaccgatg ccgaaattga agtcgctgca caaaaggttg
     2401 tcgcagcggt ggcgaaggcg acgggggccg tgttgcggta agaagcagcg gctggctgca
     2461 acttcgctcg gcaacatgcg cgcgcatacc attgtgatgc agcgacgcta cgccaagtac
     2521 gtcaatgttt ccttcacaca tccacttcaa aattgaaaag ccggcgggat ggtcccgccg
     2581 gcttctcacc acggaggtgc aaatgctagg aaacttgctc ctcctgttgc tgatagtcgt
     2641 agccctgggc ttagaagtca aggtcatcgt acgaaagcga taggggttcc ggccggctcg
     2701 ttcgcgggcc ggccaacccc tggtgggtga cattccggtt cgcgcgacat cgccgaacat
     2761 ttcgccactg ccgggccgtc ggcaccgttc gacctgcgtc acacaccgtg ccagattgcc
     2821 gctcagacag tccggccgcc acgggagaca cacgcatgcc tatcacaaaa ggctacaaac
     2881 aacttctcgc cgaggccaac gccttggtcg aaacgctgac cccggcccag gccattgccg
     2941 agttcggcaa ggacgatgtc gtcttcgtgg atttgcgcga tccgcgtgag cttgaccgcg
     3001 agggcaggat gcctggcgca ttcccgtgca ctcgcggcat gctggagttc tggatcgatc
     3061 cggaaagccc ctacgccaaa cctgtgttcg ccgaggataa gcgcttcatc ttcttttgcg
     3121 ccggtggctg gcgatcggcg ctcgcagcga aaaccgcgca ggagatgggg ctggaaaacg
     3181 tcgcccatgt cgaaggcggc ttcggcgcgt ggaaacaagc cggcggaccg gcagatccac
     3241 caaaaccgcg gacctgaccc atcaggtccc ggagccggcg cgctccagca atgcgttcgg
     3301 cagccatatt cgccgaacct tccagctcag tccctgcaat tccatcacga gacggatcgg
     3361 ttgcgcgagg ccaacggcgc gcaactccac tgaaaattgc aaggggtttt caaaaaaagc
     3421 ccatgcgacg cgggcctccg ccggcacttt ggcatcggag gtacggatca tcgaaaccag
     3481 ggtctccggc gttacggtat gatcgaccgc attgcccgcc attccgcgca caaaacccga
     3541 gccaaacggt gcaagttcat tacttgggcg agcattggcc ggctcatcca gcaccatgtc
     3601 gcagatatct tccttcagcc cctcgcgcac cgcgtaccag tcgaccagcg accgcaacgt
     3661 cgaggcatct gactgccgca ttgctgtgtc cagacgatac agcgtggcgt aggggtaacc
     3721 gaaatacccg gctcccagaa ccatgcacat cgcaagaacg ggccatttgg tgcgcatcgc
     3781 acgctcctcg atttattacc ggtccccctg gccggtggat tgtgcgcagg caggcgcctc
     3841 atacgcaaat gcctggccgg acggcgtcgg atcagtccgc cgcaaaatgg ataaaagatt
     3901 catacaataa cgtatcggtc gccccttctg ttccaaacac cagaacccgg ctctccgcgc
     3961 caagatccag agcggcagcc gcgtccgggt cggccatcgc gagtcgggca gccgcaagac
     4021 ccgcgactcc ggactcgccc gcgacaatgc cgtgccctgc caggaagcgc atggtatcga
     4081 tcgccgcatc gtccgggatc gccatgaacg ctgtggccga acgctccagt tcctgccagg
     4141 ccagcagac
//
LOCUS       DATAVD010000642         3422 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1549234, whole genome shotgun sequence.
ACCESSION   DATAVD010000642 DATAVD010000000
VERSION     DATAVD010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3422
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1549234"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            43..939
                     /locus_tag="VHX39_12015"
     CDS             43..939
                     /locus_tag="VHX39_12015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3991886.1"
                     /translation="MVPASLVTGRRNRLAAYPGRRGDRDGVARRDLGFLMTRLSPPPI
                     RLERVTLRRGRRDVLRDLDGTFAPGSLTAVAGPNGAGKSTLLLALCGQLPLASGTIAR
                     HGTNARSIALLPQEGRLDRTFPITCRDVVALGWTARLGLFRSIGREHYTVADRALASV
                     GLEGLGSRPIGALSAGQFQRVLFARTIVRDAPVILLDEPFSAVDATTEADLMAIVRLW
                     HREGRTVVAVLHDLDLIRADFPETLLLGSAEHAWGATHGVLTAASIRRARLSASIPLP
                     TEVPASAIPGTSSSDAPVEAAA"
     gene            978..1793
                     /locus_tag="VHX39_12020"
     CDS             978..1793
                     /locus_tag="VHX39_12020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEX3991887.1"
                     /translation="MRRALAGCFALSVAAPPLGVFLVLRRMSLMSDVLQHGVLPGIAV
                     GAAVGGLSVWAMGTGGMLAGLAVALLAGWFARRTGMGEDSQLAGLYLVALAAGVALIS
                     AQRGIDLTHLLFGSVLAVDNTALLAMAGAATLTLPVLAVIWRPMVLESLDPGLPGGAI
                     SASGNGGIWHSGFLALVVLCVVSGFEALGTLMSVGLMMLPAIAARHWSGSLAGQVSVA
                     VALAIAASVLGLLISFNVEIPAGPAIVLTAGAFWVVSLLVGPHQGLLWAGRGL"
     gene            complement(1833..2177)
                     /locus_tag="VHX39_12025"
     CDS             complement(1833..2177)
                     /locus_tag="VHX39_12025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013721776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3991888.1"
                     /translation="MQSAQAVEALGALAHEHRLAIYRLLVERGPDGLAAGVIAERLGI
                     APSSLTFHLQNLQRAGLIVQRRLSRQLIYAADFERMNALVGFLTENCCGGGDSACLPC
                     VVPAATTRPVPA"
     gene            complement(2180..2971)
                     /locus_tag="VHX39_12030"
     CDS             complement(2180..2971)
                     /locus_tag="VHX39_12030"
                     /inference="COORDINATES: protein motif:HMM:NF008823.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite methyltransferase"
                     /protein_id="HEX3991889.1"
                     /translation="MDASDIKTMVRARYGSIATSEAASCCAPAASCCAPSTSADVQDK
                     ARQMGYSDAELAAIPDGANLGLGCGNPQAIAALRPGETIVDLGSGAGFDCFLAARQVG
                     PNGHVIGVDMTHEMLAKARDNAGRIGAANVEFRLGELEHLPVADNTADVILSNCVINL
                     VPDKAQVFREALRVLKPGGRLAISDVVNIAPLPDPLRSDTTLLCGCVAGAAPVEQIRG
                     WLAAAGFHQIEVTVRPESRDMVATWAPGHNIENYVISATIEARKP"
BASE COUNT          530 a         1048 c         1143 g          701 t
ORIGIN      
        1 caaccaggtt ttgtaatgtt atatcgtaac catgcttaag ccatggtccc cgcatccctt
       61 gtcaccggcc gccggaaccg gctcgcggct tatcctggcc ggcgcggtga tcgggatggt
      121 gtggctcgcc gtgatctggg ctttctcatg acccgattgt cgccgccgcc aattcggctg
      181 gaacgggtga cgctgcggcg gggcaggcgg gatgtgctgc gcgacctgga tgggaccttt
      241 gccccgggca gcctgactgc tgtggccggt cccaacggtg cagggaaatc aacgctgcta
      301 ttggcgctct gtgggcaatt gccgttggcc tccggaacca tcgcgcggca tggcacgaac
      361 gcgcggtcga tcgcgctgct gccgcaggag ggacgcctcg accggacatt tccaatcacc
      421 tgccgcgacg tcgtggcact cggttggacg gctcgcctgg gcttgttccg aagcattggg
      481 cgcgagcact acactgtggc cgatcgagcc ctggcgtcgg tgggattgga aggtctgggc
      541 tcccgaccga tcggtgcgct gtctgccggg cagtttcagc gcgtactgtt cgcccgcacc
      601 atcgtgcgcg acgcaccggt catcctgctc gacgaaccgt tcagcgcggt cgacgcgacg
      661 accgaggccg accttatggc aatcgttcgg ctgtggcatc gcgaaggccg aaccgttgtc
      721 gcggtcctgc atgacctcga cctgatccgc gccgattttc ctgagacttt gctgttgggc
      781 tccgccgaac acgcctgggg tgcaacgcac ggggtgctga cggcagcttc cattcgccgg
      841 gcacgcctga gtgcctcgat cccattgccg accgaagtcc ccgcctcggc aatcccgggg
      901 acgtcatcgt ccgatgcgcc ggtggaggca gcggcctgat tcacgatttc atcgtctccc
      961 cgttcgggct cagcttcatg cggcgcgcgt tggcgggctg tttcgcgctg tccgtggcgg
     1021 caccgcctct gggcgtattc ctggtgctgc gccgcatgag tctcatgagc gatgtgctgc
     1081 aacacggggt cctccctggc atcgcggtcg gcgccgcggt tggaggcctg tcggtttggg
     1141 ccatggggac cggcggcatg ctggcgggcc tggcggtcgc actgcttgcg ggttggtttg
     1201 cgcgacggac cggtatgggt gaggacagcc aactcgccgg gctttacctg gtggcactgg
     1261 cggcgggcgt tgccttgata tccgcccaac gaggcatcga tttgacccat ctgctgttcg
     1321 gcagcgtatt ggcggtcgat aacactgcgc tgcttgcgat ggcgggagcg gcgacactga
     1381 ccttgccggt gctggcggtg atctggcggc caatggtgct ggagagcctc gatccgggct
     1441 tgccgggcgg cgcaatatcc gcctccggta acgggggcat ttggcacagc ggtttcctcg
     1501 cccttgtcgt gctctgcgtc gtgtcaggct tcgaggcact gggcactctg atgtccgtcg
     1561 gactgatgat gctgccggca atcgctgcgc ggcactggtc gggttcgctg gcaggtcagg
     1621 tgagcgtcgc agtggcgctg gccatcgcgg cgtcagtgct tggcttgctg atttcgttca
     1681 acgtggagat ccccgccggt ccggcgatcg tgctgacggc gggcgcgttc tgggtggtca
     1741 gcttgctggt tggcccgcac cagggactgt tgtgggcagg ccgcggactt tagctggatg
     1801 ccgtttaatt cgttgcgtct tcaggtcggc ggtcaggccg gtactgggcg agtggttgcc
     1861 gcgggaacca cgcagggtag gcaggcgcta tctccgccgc cgcagcaatt ctcagtgaga
     1921 aacccgacca gcgcattcat ccgctcgaaa tccgccgcgt agatcaattg tcggctcaac
     1981 cggcgctgca cgatcaatcc tgcccgttgc aggttctgca gatgaaatgt gaggctcgat
     2041 ggcgcgatcc caagccgttc ggcgatcaca ccggccgcca ggccatccgg gcctcgctcg
     2101 accagcagac ggtagatcgc caaccgatgc tcgtgcgcca gcgcacccag cgcctcgacc
     2161 gcctgggctg attgcatggc taaggcttgc gggcttcgat ggtggcggag atgacgtaat
     2221 tttcgatgtt gtgtccgggc gcccaggtgg caaccatgtc gcggctttcg ggcctgacgg
     2281 tgacctcgat ctggtggaac ccggccgccg ccagccagcc gcggatctgc tcgaccggag
     2341 ccgcacctgc gacgcagcca catagcaaag tagtgtcgct gcgcagtggg tcgggcagcg
     2401 gggcaatatt cacaacgtcg gatatcgcca gccggccacc cggcttcagc acacgcaatg
     2461 cctcgcggaa tacctgggct ttgtcgggca ccaggttgat cacgcaattt gacagaatga
     2521 cgtcggcggt attgtcggcg accggcagat gctccagttc gcccaaccgg aattcgacgt
     2581 tggccgcacc gatgcggccg gcgttgtcgc gcgctttggc gagcatctcg tgggtcatgt
     2641 cgacgccaat tacgtgcccg ttgggcccga cctgacgggc ggccaggaaa cagtcgaagc
     2701 cggcgccaga gcccaggtcg acaatggtct ctccggggcg gagggcggcg attgcctggg
     2761 gatttccgca acccagtccg agattggcgc catcggggat cgccgccagt tcagcgtcgg
     2821 aataacccat ttgccgcgcc ttgtcctgaa cgtcggccga cgttgaaggg gcgcagcacg
     2881 aggcggcggg tgcacagcaa ctcgccgcct cggaggtcgc gatactgccg tagcgagcgc
     2941 gcaccatggt cttgatgtcg gaggcgtcca ttggatcatt cccattgtca ggagcgcgtt
     3001 gttatcagcc ctacggaggc ctgtcaacga tatttcgtgg aatatcgtat tgtcagaaat
     3061 ggcggcaata cggcgccggt ttcccgcgct cgcctggagg ggtctgaagt ccacgatctg
     3121 gatccgcgat gtgccggcct gcggcaagca agatgaaacg ccgatgcacc ggggcgatca
     3181 tttcaggctg gcgcgttcgg tcgtagtcgc tggtctcgcg acgcgacgaa ttattgttta
     3241 accacatcat tttgaaacgc cactcgccga cgaactgaat acgtctgatg tcctgtcgcc
     3301 tgactggcca aattatctaa gctgtgtcgt caaccatgcc gaggcgtccc gtccgatcgt
     3361 tcggcagaac tgctttgacc gttgttgctg cgttgatgat tggttaacgg acgcctcaca
     3421 ga
//
LOCUS       DATAVD010000643         3241 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1361186, whole genome shotgun sequence.
ACCESSION   DATAVD010000643 DATAVD010000000
VERSION     DATAVD010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3241
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1361186"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>3241)
                     /locus_tag="VHX39_12035"
     CDS             complement(<1..>3241)
                     /locus_tag="VHX39_12035"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX3991890.1"
                     /translation="GALLEAFDRVATQGGPEFVLLSGYSGVGKSSVVNELHKALVPRH
                     GLFASGKFDQYKRDIPYATLAQAFQGLVRPFLARSDAELGALRAAFLDALGPNARLMT
                     DLIPELKLIIGEQPPVPELEPRQAQSRFQLVFQRFIGVFARPDHPLVLFFDDLQWLDT
                     ATLDLLDDLLTRSELQYLMLIGAYRDNELDATHPLLRKLIAIRQAGAPVHEIRLAPLA
                     RDDLGQLIADTFHCNSDRSAPLARLVQEKTEGNPFFVIQFLHTLAEEGLLAFDHDAAR
                     WRWDLERIHAKSYTDNVVDLMAGKLSRLPVETQQTLQQMAYVGSTADMSMLSIVLQIT
                     EEQIHVALWPAVRQELVERQEGSYKFVHDRVQEAAYLLTPETLRAAVHLQIGRLLARQ
                     TPPEKREEAIFEIVNQMNRGAAQITSRDEREQLAELNLVAGKRAKASTAYVSALTYLN
                     LGTSLLAEEDWERRRDLRFALELNRAECEFLTGDLSVAEERLAALSHRTTTTVEQAIV
                     ACLHIDVCTTLDQSGRAVAVCLDYLRHVGIEWSPHPTEEDVRCEYERIWSLLGSSTIE
                     DLIDLPLMDDPASLATVDVLGKLVPPASHTDANLVCLASCKAASLSLERGNCDASCVA
                     YVMLARVAGPLFGDYRAGFRFGQLGYELVERRGLKRFEAGTYLNFAIYVLRWTKHVRA
                     SRDLMRHAFDAANRIGDLTYGAYTCENLNSDLLFAGENLREVQAEAERGLAFAEKARF
                     GLVIDFIATQLALIRMLRGLTPTFGRLDHGQFNEAQIEYALSSNPVLAIAAEWYWIRK
                     LQARFLAGDHGAAMDAKSNAQRLLWTTAAHVEEAEYHFYGALAEAAFCNSAPPGERQP
                     HIDAVAAHYRQHQIWAENCPENFANRAALIGAELARLEGRELDAERFYEKAIHSARDN
                     GFVKNEAIAYERAAEFYRARGFNQIADLYLRNARYGYLRWGAVGKVRQLEAMYPRLMV
                     DEPAPGVTNTIATPVESLDLATVIKVSQTISSETVLEKLIDTLMRTAIAQVGAVRGLL
                     VLETGAEPRIEAEATTASDTVRVELCDAPVTAAALPEKVLHYVLRTQESV"
BASE COUNT          648 a         1005 c          961 g          627 t
ORIGIN      
        1 acgctctcct gcgtacgcaa gacgtagtga agcactttct ccggtagcgc agcggcggtc
       61 accggtgcat cgcacagttc gacgcggacc gtatcgctgg cggtcgttgc ttccgcctcg
      121 atccgcggct ccgcccctgt ctccagcacc aacaaaccgc gcaccgcccc cacctgggca
      181 atcgccgtgc gcatcagcgt gtcaatcagt ttctccagca ccgtctcgct cgagatggtt
      241 tgcgacacct tgatcacggt cgccagatca agactttcga ccggtgtcgc gatcgtattt
      301 gtcacgccgg gcgcgggctc atcgaccatg aggcgcgggt acattgcctc aagttggcgc
      361 accttgccga cggcgcccca acgtaagtag ccgtagcggg cattgcgcaa atacagatcg
      421 gcgatctggt tgaagccgcg cgcccggtag aattcggcgg cgcgctcgta ggcgatcgcc
      481 tcatttttga cgaagccatt gtcgcgcgcc gaatggatgg ccttttcgta gaaacgctcg
      541 gcgtcgagct cacgaccttc gaggcgtgca agctcggccc cgatcaacgc ggcgcgattt
      601 gcgaaattct cggggcaatt ctccgcccat atctgatgtt gccggtaatg cgcagccaca
      661 gcgtctatgt gaggctgtcg ctcgccgggt ggcgccgagt tgcaaaatgc ggcctcggcc
      721 aatgcgccat aaaagtgata ttccgcttcc tcaacgtgcg cagccgtggt ccacaacagc
      781 cgttgcgcat tcgatttggc atccatggcc gccccgtggt cgccggcaag gaaacgtgcc
      841 tgcaatttcc ggatccagta ccactccgcg gcgatcgcca ataccgggtt gctggacaat
      901 gcgtattcga tttgagcttc attgaactgc ccgtggtcca ggcgcccgaa tgtgggcgtc
      961 aggcctcgca gcatcctgat cagcgcaagt tgcgtggcga tgaagtcaat gacaagcccg
     1021 aatcgcgcct tctcggcgaa cgcgaggccc cgttcggctt ccgcttgcac ttcgcgcagg
     1081 ttctcacctg cgaaaagcag gtccgagttt aagttctcgc acgtgtaggc gccataggtg
     1141 aggtcgccga tccggtttgc cgcatcgaac gcgtgacgca tcaaatcacg gctggctcgt
     1201 acgtgttttg tccagcgcaa aacataaatc gcaaagttaa gatacgtgcc cgcctcgaag
     1261 cgtttaagcc cgcgccgctc gacaagttcg tagccaagtt gaccgaaccg aaatcctgcc
     1321 cggtagtcgc caaacagcgg tccggcgacc cgggcgagca tgacataggc gacacatgat
     1381 gcatcgcaat tgccacgctc aaggctgaga ctggctgctt tgcagctcgc caggcaaacc
     1441 aggtttgcat ccgtgtgcga agccggcggc accagcttac ccagaacgtc tacggtcgcc
     1501 agcgatgccg ggtcgtccat caacggcaaa tcgatgaggt cctcgatcgt gctgctgcca
     1561 agcagggacc agatgcgctc gtattcacat cgcacatcct cctcggtcgg atgcggtgac
     1621 cattcgatgc cgacatgccg gaggtagtcg agacaaaccg cgaccgcacg gccgctttga
     1681 tcaagggtcg tgcaaacgtc gatatgcagg cacgcaacaa tggcttgttc gaccgtcgtc
     1741 gtggtgcgat gtgacagcgc tgccaatcgc tcctcggcga ccgataaatc gccggtcaaa
     1801 aattcgcatt cggcccggtt caattccagc gcaaaccgca agtcgcgccg gcgctcccag
     1861 tcttcctccg ccaacagcga cgtaccgaga ttgagatagg tgagcgccga gacatacgcc
     1921 gtagaggcct tggctcgctt gcccgcgacc aggttcagtt cagccagctg ttcacgctcg
     1981 tcgcgtgagg tgatctgggc tgcgccgcga ttcatttgat tgacgatctc gaagatcgct
     2041 tcctcgcgtt tttcgggagg cgtctgcctg gccagcaacc ggccgatctg gagatgaacc
     2101 gcggcgcgca acgtttccgg agtcagcaaa taggccgcct cctggacccg gtcgtgcaca
     2161 aatttgtaag agccctcctg gcgttcgacc agttcctgac ggaccgccgg ccaaagcgcc
     2221 acatgaatct gctcctcggt gatctggagc acgatcgaaa gcatggacat atcggcggta
     2281 ctgccgacgt aggccatctg ctgcagagtc tgctgcgttt caaccggtaa ccggctcagc
     2341 ttgccggcca tgaggtccac gacgttgtcg gtgtagctct tggcgtgaat gcgctcgaga
     2401 tcccagcgcc agcgcgccgc gtcatgatcg aaagcgagca ggccctcttc tgcaagcgtg
     2461 tgcaaaaact ggatcacgaa gaaagggttg ccttcggtct tttcctgcac taaccgcgcc
     2521 agtggcgcag agcggtcgga gttgcaatga aacgtatccg caatcaactg cccaaggtcg
     2581 tcgcgggcga gcggcgccag gcggatctcg tgcactggcg cgccggcctg gcgaatggcg
     2641 ataagcttgc gcagcaaggg atgcgtggcg tcgagctcgt tgtcacgata ggcgccaatc
     2701 aacattaagt attgcagctc cgaccgcgtc agcaaatcgt ccaacaaatc gagtgtcgcg
     2761 gtgtcgagcc attgcagatc gtcgaagaac aggaccagcg gatggtccgg gcgggcgaag
     2821 acgccaatga agcgttggaa tacgagttga aaccggctct gtgcctgtcg cggctcgagc
     2881 tccgggaccg gcggctgctc gccgatgatg agcttcagtt cggggatcag gtcggtcata
     2941 agccgtgcat tcggccccag cgcgtcgaga aatgcagcac gcaaggcccc cagttcggcg
     3001 tcgctcctgg ccaggaaagg ccgcaccaga ccttgaaacg cctgtgccaa cgtcgcgtag
     3061 ggaatgtcgc gcttgtactg gtcgaacttg cctgaagcga aaagcccgtg tcgcggcaca
     3121 agcgccttgt gcagttcgtt gactactgag gatttgccga cgcctgaata gcccgacaac
     3181 aacacgaact ccggcccgcc ttgcgtagcg acccgatcaa acgcctcgag gagagcgccg
     3241 a
//
LOCUS       DATAVD010000644         2638 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3223689, whole genome shotgun sequence.
ACCESSION   DATAVD010000644 DATAVD010000000
VERSION     DATAVD010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2638
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3223689"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="VHX39_12040"
     CDS             complement(<1..428)
                     /locus_tag="VHX39_12040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3991891.1"
                     /translation="MLALQILIDGFAVSALYALGAIGFTLMFGVSGVLNLAHGGIMLI
                     AALFGWYVAAEYNAGPYGGAAVGIIAGLLASYVTYFVVVRPIQRSRAIPKIEEEIFIL
                     TGTLLWGIMIQVGMDYLFSNNPVSMQPLIPGVVNILGVRTP"
     gene            complement(634..1890)
                     /locus_tag="VHX39_12045"
     CDS             complement(634..1890)
                     /locus_tag="VHX39_12045"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3991892.1"
                     /translation="MTTPRWRHLPHAALFAGSLMLSVSGAHAADDTGPIKIGVISEQS
                     AIVGQAILQGAQIAADEINAKGGVDGRKIEIISYDDHSSASDAVRAFQRAAQQDHVSA
                     VVATFISEVALAIEPWSARLHVPTMTPAAASNLISKQVHDKYAQFKYMFEDWLPSPIL
                     ATAVCDASHDIFAVGLHMKTAAVMSEDADWTAPLDEGLLKCLPKAGLNVVDHVRFNPD
                     TTDFTPIYNEIEAKHPDVILTGIAHVGVQPTVQWHDQQVPIALGGISAQATNLTFWKD
                     TNGAVNGVVTQTGTVPGLAITSHTLPVADEFQKRYGHFPAFDGFTSYDAVQIFAAAIA
                     RAKSTDPDKMVEEIEKTDMEGTLGHIQFYGRQDEFTHALKYGPGLTTGVFMQWQDGKQ
                     VCIWPADKCHGKLVFPSFVKLQQAAK"
     gene            2365..>2638
                     /locus_tag="VHX39_12050"
     CDS             2365..>2638
                     /locus_tag="VHX39_12050"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3991893.1"
                     /translation="MDLHLKDKVVLTTGSSRGIGLACAKAFAAEGCRIMLSGRSPAVL
                     AETETALRANGATVAAHAADVTDPNQAADVIQSTVAAFGGIDILVNN"
BASE COUNT          520 a          787 c          821 g          510 t
ORIGIN      
        1 ggcgtgcgga cgcccaggat gttcaccacg cccggaatca acggctgcat gctgacgggg
       61 ttgttactga acagatagtc catcccgacc tggatcatga tgccccacag caacgtgccg
      121 gtgaggatga agatctcctc ctcgattttc gggatcgcgc gagagcgttg aatcgggcgt
      181 accaccacga agtaggtgac ataggaggcg agcagtccgg cgatgatacc gaccgccgcg
      241 ccaccgtagg gcccggcatt gtattccgcg gcaacatacc aaccgaacaa agcggcgatg
      301 agcatgatgc cgccgtgcgc gagattgagc acgccgctga cgccgaacat caacgtgaac
      361 ccgatggctc ccagggcgta gagagcgcta acggcgaagc cgtcgatcag gatttgcagc
      421 gcgagcacgg tcgtttccgt tgggcggtgg gaatgattgc ttgcagggag gccgtgaagg
      481 aattgtcgtg gccgaacctt gcctcccccg tcatggccgg gcttgacccg gacatctctc
      541 gggaacggcc cgagatggcc gggtcaagcc cggccacgac gatgaaacag agccggtccc
      601 caatccggcc gcgacggcga agcacgatgc cggttatttc gcggcttgtt gcagcttcac
      661 aaacgacgga aacaccagct tgccgtggca cttgtcggcc ggccagatgc acacctgctt
      721 gccgtcctgc cattgcataa acacacccgt ggtcaatcct gggccgtact tcagcgcatg
      781 ggtgaactcg tcctgccggc cgtagaactg gatatggccg agcgtgcctt ccatgtcggt
      841 cttctcgatc tcctcgacca ttttgtcggg atcggtcgat ttggcgcgtg cgatggcggc
      901 agcgaagatt tgcacggcgt cgtaggaggt gaacccgtca aacgccggga aatggccgta
      961 gcgcttctgg aattcgtcgg ccaccggcag tgtgtgcgag gtgatggcaa gaccgggcac
     1021 tgtccccgtc tgggtcacga cgccgttcac cgcgccgttg gtgtccttcc agaacgtcaa
     1081 attggtcgcc tgggcgctga tgccgccaag cgcaatgggc acctgctggt cgtgccattg
     1141 caccgtcggc tgcactccaa catgggcgat accggtcagg atgacatccg ggtgcttcgc
     1201 ttcaatttcg ttgtagatcg gcgtgaagtc ggtggtgtcc ggattgaatc ggacgtggtc
     1261 gaccacattc aggccggcct tcgggaggca tttcagcaag ccctcgtcga gtggtgcggt
     1321 ccagtccgca tcctcgctca tgaccgccgc tgtcttcatg tgcagcccaa cggcgaaaat
     1381 gtcatgcgag gcgtcgcaca ccgcggtggc gaggataggc gagggcagcc aatcctcgaa
     1441 catgtatttg aactgcgcgt acttgtcgtg cacctgcttg ctgatcagat tgctcgccgc
     1501 ggccggcgtc atggttggca cgtgcaggcg cgccgaccag ggctcgatcg ccagagctac
     1561 ttcactgatg aaggtggcga ccaccgccga cacatgatcc tgctgcgcgg cacgctggaa
     1621 ggcgcgaaca gcgtccgagg ccgaggaatg atcatcgtag gagatgatct cgatcttgcg
     1681 gccatcgacg ccgcctttgg cgttgatctc atcggcggcg atttgcgcgc cctgcaggat
     1741 cgcctggcca acgatcgccg attgctcact gatcacgccg atcttgatcg gcccagtgtc
     1801 gtcggcggca tgggcgccgg acacggatag catgagtgac ccggcgaaca gggcagcgtg
     1861 cggcaaatgg cgccagcggg gcgttgtcat ggaaggcgtc tcctcgtttg ttttgtcatc
     1921 gcggctggag ccatcgtcga cgtggcgata gaccacaggt ctaaacgcga caagtcaacc
     1981 accgttccac aagccgcccc gcggacgatc gtggatcatt tcgtttgccg tccgtcgcgt
     2041 tggcgtaaac ggcgacacgg tcagccagcg ttatcagagc tcaaaaatcc gggcgggtcg
     2101 tcttctgaat acaccgcgat ctgctgggca ggcgtgtcct gacagttaaa ttacatccat
     2161 ccgaaaatca ctacggtgta ccatcgtgcg ccaatccgca tcagcatgcg attactgggt
     2221 aacccaatca aaaccggccg acgtcaccac attcggttcc cgaaatgtgc aaattgtaac
     2281 agttgcgctc aggcaatttg atgcggaaga cagcatgtcg gtaaactcga gcgcaatcga
     2341 tttgcaccga agggacgcgc accaatggac ctccatctga aggacaaggt cgtattgacc
     2401 acagggtcga gtcgcggcat cgggctcgca tgtgccaaag cctttgcggc cgagggttgc
     2461 cggatcatgc tgtccggccg gtcaccggcg gtgctggccg agaccgagac ggcactacgg
     2521 gcgaacggtg ccacggtcgc cgcgcatgcc gctgacgtca ccgatcccaa tcaggctgct
     2581 gatgttattc agtcgacagt tgcggcgttt ggcggcatcg acatcctggt caacaacg
//
LOCUS       DATAVD010000645         3711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2291671, whole genome shotgun sequence.
ACCESSION   DATAVD010000645 DATAVD010000000
VERSION     DATAVD010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3711
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2291671"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..954
                     /locus_tag="VHX39_12055"
     CDS             <1..954
                     /locus_tag="VHX39_12055"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     exonuclease"
                     /protein_id="HEX3991894.1"
                     /translation="PVRACPRALITHGHADHARSGHGAVLATRETLAIMELRYGADFT
                     TERQVAPYGEPMRIGEVRVSFHPAGHVLGSAQILIEASGYRLVVSGDYKRGHDPTCLP
                     FEVLRCDAFISEATFGLPVFRHPDPRDEVGRLLESCRTFPDRAHLVGAYSLGKAQRLM
                     ALIHEAGWDRPIHIHGAMEKITDFYRAEGAPVGETLKIAAKSRNSLGGEIVICPPSAT
                     RDLWARGFSDPVVAFASGWMRIRARARQGGVQLPLVVSDHADWDELCSTILDTECHEL
                     WITHGAEDALVHWALQRGLQARPLHLMGYGEEETDEATAGQ"
     gene            951..2600
                     /locus_tag="VHX39_12060"
     CDS             951..2600
                     /locus_tag="VHX39_12060"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cisplatin damage response ATP-dependent DNA
                     ligase"
                     /protein_id="HEX3991895.1"
                     /translation="MNRFAELLDRLAYEPSRNNKLRLITEYFRTEADPDRGYALAAMT
                     GELSFASAKPALIRTLIAERTDPVLFAMSYDYVGDLSETVALMWPRAAPGTNHPPAPG
                     LGEIVETLHATRKTELPAQLAHWLDLLDEIGRWALLKLITGALRIGVSARLAKTAVAA
                     LGALPANEVEEVWHGLQPPYVELFAWIEGRSERPQTNNPAPFRTPMLAHAIDDADFVG
                     LDPRDFRAEWKWDGVRVQAVGGFGTNGQRVTRLYSRTGEDVSAAFPDMIDALADTTFD
                     QATIDGELLVVRDGMVQPFSVLQQRLNRKTVSTKLIAEYPLHIRAYDLLADHGEDLRP
                     LPFDTRRQHLETLLARYHGGRIDLSPLLTFDTWDSLAAARADPASAGAGMNAEAIEGV
                     MLKRRDSLYIGGRPRGLWWKWKRDPFNIDAVLMYAQRGHGKRSSFYSDFTFGVWRAND
                     GADELVPVGKAYFGFTDEELLQLDRWVRNHTVSRFGPVREVTANKSEGVVLEIAFEGL
                     NQSTRHKSGVAMRFPRIARIRWDKPAREADRLESLQKLLRG"
     gene            2716..3090
                     /locus_tag="VHX39_12065"
     CDS             2716..3090
                     /locus_tag="VHX39_12065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX3991896.1"
                     /translation="MATINDPTDTRGRLIAASQVNGTNVYNSAGEKLGHIYDVMLDKQ
                     SGKADYAIMSFGGFLGIGDRYHPLPWQVLRYDPAQEGYVVNIDRNRLEGAPSYAANET
                     NLWNDPAYGRRVTDYYGGMMVR"
     gene            3157..>3711
                     /locus_tag="VHX39_12070"
     CDS             3157..>3711
                     /locus_tag="VHX39_12070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991897.1"
                     /translation="MTEQHVGRIEGYAIVSEDGMLATADRVMPDSLKFEADQEFFERG
                     LDDVDVVVHGRHSQEQQTRSALRYRLILTRRVPGVAAHPSNPRARLWNPAGASFKDAL
                     AALGAPGPNIGVIGGPDVFALFLDQYDVFYLTRAPGVLLPGGRPVFPEVPERTPEEVL
                     ASSGFAPGPVVVLDPLRGLTMVGWL"
BASE COUNT          702 a         1102 c         1149 g          758 t
ORIGIN      
        1 ccggtgcggg cctgcccgcg cgccttgatc acacacggcc acgccgatca tgcccgttcc
       61 gggcacggcg cggtgctcgc gacccgcgag acgttggcga tcatggagct gcgctatggc
      121 gctgatttca ccacggaacg acaggtggca ccctatggcg agccaatgcg tatcggcgag
      181 gtccgcgtga gttttcaccc cgccggtcat gtcctcggct cggcgcaaat cctgatcgaa
      241 gcgagcgggt accggctggt cgtctcaggc gactacaagc gaggccacga tcccacctgc
      301 ctaccgttcg aagtgttgcg ttgcgacgct ttcatctcgg aggcaacctt cgggctgcca
      361 gtgttccgcc accccgatcc gcgtgacgag gtcggtcggc tgctcgaatc atgccggact
      421 tttcccgatc gggcacacct cgtgggcgcc tattcgctcg gcaaggcaca acgtctgatg
      481 gccctgatcc atgaagccgg ctgggatcgg ccgatccata tccatggcgc aatggaaaaa
      541 atcaccgact tttaccgcgc ggaaggtgcg ccggttggtg aaactctcaa aatcgccgcc
      601 aaatcgcgca attcactggg cggtgagatc gtgatctgtc cgccatcggc gacccgcgat
      661 ctgtgggcgc gcggcttttc cgatccggtt gtcgcatttg cttccggttg gatgcgcatt
      721 cgggcccgcg cgagacaagg cggcgtgcaa ttgccgctgg tggtgtccga tcatgccgat
      781 tgggacgagt tgtgcagcac catccttgac accgaatgtc acgagctctg gatcacccac
      841 ggagccgaag atgccctggt acactgggct ttgcagcgcg gactgcaggc ccgcccgttg
      901 catctgatgg gttatggcga agaagaaacc gacgaagcga cagcaggcca atgaaccgct
      961 ttgccgaatt gctcgatcgc ctggcctatg aaccgtcacg caacaataag ttgcgtttga
     1021 taaccgaata ttttcgcacc gaggccgatc ctgatcgcgg ctatgcgctc gccgccatga
     1081 ctggcgaatt gagtttcgcc tctgccaaac ccgcgctgat ccggacattg atcgctgaac
     1141 gtaccgaccc cgtgctgttc gccatgagtt acgactatgt cggtgatctg tcggagacgg
     1201 tggcactgat gtggccacgc gcggcacccg gcaccaatca tccgcccgcc cctggtttgg
     1261 gcgagatcgt agaaaccttg catgcgaccc gaaagaccga gcttcccgct caacttgccc
     1321 attggctcga tcttctcgac gaaatcggtc gctgggcttt attaaaactc atcactggcg
     1381 cactgcgcat tggggtttcg gcgcgactgg ccaaaactgc cgtcgccgct ttgggcgcgc
     1441 tgccggccaa tgaggtcgag gaagtctggc acggcttgca gccgccgtat gtcgagttgt
     1501 tcgcctggat tgaaggtcgt tcggagcgcc cgcaaaccaa caatccggca ccgttccgca
     1561 caccaatgct ggcgcacgcg atcgatgacg ccgactttgt gggccttgac ccccgcgact
     1621 tccgcgccga gtggaaatgg gacggcgtgc gggtgcaggc ggtgggcggg ttcggcacca
     1681 atggccaacg tgtgacgcgg ctttattcgc gcaccgggga ggatgtctcg gcagcatttc
     1741 ccgatatgat cgacgctctg gcggatacga cgttcgacca ggcgacgatc gatggcgaat
     1801 tgctcgtggt gcgtgatggc atggtgcagc cattcagcgt gttacagcag cggttgaacc
     1861 gtaaaaccgt atccacaaaa ctgatcgccg aatatccgtt gcatatccgg gcttacgatc
     1921 tcctcgcgga ccacggcgaa gacctgcgtc ccttaccgtt cgatacccgc cgacagcacc
     1981 tggaaacatt gctcgcgcgc tatcacggtg gccggatcga tctttcgcca ctgctgacat
     2041 ttgatacctg ggattcgctc gctgccgcgc gggccgatcc ggcgagcgca ggtgcgggca
     2101 tgaatgccga ggccatagaa ggcgtgatgc tgaagcggcg cgattcgctt tacatcggtg
     2161 gcaggccgcg cggcttgtgg tggaaatgga agcgcgatcc gttcaacatc gacgcagtcc
     2221 tgatgtatgc gcagcgcggt cacggcaagc gctcgtcgtt ttactcggat tttacctttg
     2281 gcgtgtggcg ggcgaatgac ggcgccgatg aacttgtgcc ggtcggcaag gcctatttcg
     2341 gctttaccga tgaggaactt ttgcaactcg atcgttgggt acgcaatcat accgtaagtc
     2401 gattcggtcc ggtgcgcgag gtgaccgcca acaaatccga aggcgtggta ttggaaattg
     2461 cgtttgaggg tctcaatcaa tcgactcgcc acaagtccgg tgtcgcgatg cggtttccgc
     2521 gtatcgcgcg gatccgctgg gacaaaccgg cacgcgaggc tgaccgcttg gagtcgctgc
     2581 aaaaactgtt gcgtggctga atcatgaatt ttccgatagg cacgcgccag ggaacccggc
     2641 agcgtaccgc cacgttggtg acccatgcgg tcgatttacc gatcggtacc gctgacattc
     2701 atacaggtga tatccatggc gactatcaat gacccaaccg acaccagggg ccggctgatc
     2761 gcagccagtc aggtgaatgg caccaacgtt tacaattcgg ctggcgaaaa gctgggccat
     2821 atctacgacg tcatgctgga caagcaatcc ggcaaagccg attacgccat catgagtttc
     2881 ggtggctttc tcggcatcgg cgaccgctat catccgttgc cgtggcaggt gttgcgctat
     2941 gatcctgcgc aagagggcta tgtggtcaac atcgaccgca atcgcctgga aggcgcaccg
     3001 tcttatgccg caaacgaaac caacctgtgg aatgacccgg cgtacggccg ccgcgtcacc
     3061 gactattacg gcgggatgat ggtccgctga tcatgagaag gggagggtgc gagccctccc
     3121 cttgcagttt atcaggcggc gtggcgtgaa taagacatga cagagcagca cgtcggccgc
     3181 attgagggtt atgccatcgt ttccgaagat ggcatgctgg cgaccgccga tcgcgtgatg
     3241 ccggattcgt tgaaatttga agcagaccag gaattctttg agcgtggcct ggatgacgtc
     3301 gacgtcgttg tgcatggccg ccactcgcag gagcagcaga cgcgatcggc cttacgatac
     3361 aggctgattc ttacccggcg cgttcctggt gtcgcggcac acccgtcgaa cccgagagcg
     3421 cggctgtgga accctgccgg tgcaagcttt aaggacgcgt tggccgcact tggcgcgccg
     3481 ggtccaaaca tcggcgtgat cggcggcccg gacgtgttcg cattgttcct ggaccaatac
     3541 gacgtgtttt acctgacccg ggcgcccggc gtcttgctgc ccggcggccg tccagtgttc
     3601 cccgaggttc ctgagcgaac gcccgaggaa gtgctggcca gcagtggttt cgcaccaggc
     3661 ccagtagtgg tgctggatcc gttacgcgga ctgacgatgg tcgggtggct g
//
LOCUS       DATAVD010000646         2069 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_431360, whole genome shotgun sequence.
ACCESSION   DATAVD010000646 DATAVD010000000
VERSION     DATAVD010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_431360"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1189)
                     /locus_tag="VHX39_12075"
     CDS             complement(<1..1189)
                     /locus_tag="VHX39_12075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004273195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX3991898.1"
                     /translation="MREHAVVVAGGGPTGLMLAGELALASVDVAIVERRENQELAGRR
                     AGGLHARTIEVFDQRGIADRFLAQGQVAQVAGFNMIRLDISDFPTRHPCGLALTQNHI
                     ERILAAWVRELGVPVYSGHEVTGFAQDATGVVVALNDGTSLRAAYMVGCDGGRSLIRK
                     AAGIDFPGWDPTMSWLIAEVEMTEKPKLGFHKDALGIHAISPLKNGHTMGIVLTEPDV
                     SSTGEPALADVSAALISVYGTDYGCHSPTWLSRFTDMARQAAAYRDRRVLLAGNAAHI
                     HAPIGGQGLNIGVQDAVNLGWKLAQVVKGTSPDSLLDTYQAERHPVAARVLRNTLAQV
                     ALRRTDERSKALADTVADLLGTKDARQHLASEMSGLGVHYNLGRSHPLLGRRMPDLEL
                     LTAK"
     gene            complement(1453..1950)
                     /locus_tag="VHX39_12080"
     CDS             complement(1453..1950)
                     /locus_tag="VHX39_12080"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: protein motif:HMM:NF024744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004721 - phosphoprotein phosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HEX3991899.1"
                     /translation="MEQFLATNPTPDQMKAWMAKTYGDFVVTNAPEYAKVFAQLKQDH
                     LPLLYHCTAGKDRTGVFSALLLLTLGVPEKTVLAGYAMTDQYLLNAMSPAARQKMLAN
                     ASPMYASLPPEVIRVMMSADPEVLRSTLRAINEKFGSFDNYRRTELGVSDADVEVLKA
                     RLLEQ"
BASE COUNT          378 a          637 c          637 g          417 t
ORIGIN      
        1 ccttggcggt gagcagttcg aggtccggca tgcggcgtcc gagcagcgga tggctcctgc
       61 cgagattgta gtgaacaccg aggccggaca tctccgaggc gagatgttgg cgggcgtcct
      121 tcgtgcctag cagatctgca acggtatcgg ccagggcctt gctgcgttcg tcggtgcggc
      181 ggagagcaac ctgggccagg gtgttgcgca ggacgcgcgc cgcgaccggg tggcgctcgg
      241 cctggtacgt gtcgagcaag ctgtctggcg aggtgccctt aaccacctgg gccagtttcc
      301 agccgagatt taccgcgtcc tgcacgccaa tattgaggcc ctgcccgccg atgggcgcgt
      361 gtatgtgggc cgcgttgccg gccagcagga cacgccggtc tcgataggcc gccgcctggc
      421 gcgccatatc ggtgaagcgg gaaagccaag tagggctgtg gcagccgtag tcggtgccgt
      481 aaacggagat cagcgccgcg ctgacatcgg ctagtgcagg ttcgccggta gagctgacat
      541 cgggttccgt cagtacgatg cccatcgtgt ggccgttctt cagcggactg atggcatgga
      601 taccgagtgc atccttgtgg aagcccagct tcggtttctc ggtcatctcg acttcggcga
      661 tcagccagct catcgtcgga tcccagccgg gaaagtcgat gcccgcggcc ttgcgaatca
      721 ggctgcgccc gccgtcgcag ccgaccatgt acgccgcccg gagcgacgtg ccgtcattga
      781 gcgcgacaac aacgccggtg gcatcctgcg cgaaacccgt cacctcgtgc ccgctataga
      841 cagggacgcc cagctctctg acccaggcgg ccaggatgcg ctcgatgtgg ttctgcgtca
      901 gtgcgaggcc acagggatgc cgggtgggaa agtcgctgat atccagccgg atcatgttga
      961 agcccgcgac ctgggccact tggccctggg cgaggaagcg gtcggcgatg ccgcgctggt
     1021 caaacacctc gatggtacgt gcatgcagac cgcccgcgcg ccgaccggcg agctcctggt
     1081 tctcgcgccg ctcgacaatg gcgacgtcga cacttgccag agccaactct cctgccagca
     1141 tcagcccggt cggccctccg cccgcaacca caactgcatg ctccctcatt gtgcctccct
     1201 tttccgtgga ttttttgctt ccggcgagga tgatgcggca tgatccacct attgctgcaa
     1261 gcccctggtg gcgcggtatc ctatagcggg gggagagact actctttata aggcgcgggt
     1321 gcgatgcccc gtcccttccg gaacagaggc gtcccggtgc aactcatcgc cggtcctcga
     1381 atcaatgaga agaaagatcc cacccattta aagggtggtg ggccggaatc aggcttacat
     1441 tactcacggc tgtcactgtt cgagaagccg ggctttcagc acttcgacat ccgcatcgga
     1501 aaccccaagt tcggtgcgtc tgtagttgtc gaaggagccg aatttttcgt ttattgcccg
     1561 aagcgtgctg cgcagaacct ctggatcggc cgacatcatt acgcgtataa cctctggcgg
     1621 caaactcgca tacatcggac tcgcgttggc aagcattttc tgacgcgcag ccggcgacat
     1681 tgcgttcagc agatattgat cggtcatcgc gtagcccgcc agtacggtct tttcgggaac
     1741 gccaagtgtc agtagcaaga gcgcgctgaa gacgcccgtg cgatccttgc ccgcagtaca
     1801 gtgatacaga agcggaagat ggtcctgctt caactgcgcg aagacttttg cgtactcagg
     1861 agcattcgtc acgacaaaat cgccgtacgt ctttgccatc caggctttca tctggtccgg
     1921 cgtggggtta gtggcgagaa attgctccat cggagcgctc acgttttttt ccccaccacg
     1981 ccgatcggca cgctgacatg aagcacatcc gaccctggaa tccaaatttc gggcgccgtc
     2041 gcattctcat ctggtgttct gaaatcgca
//
LOCUS       DATAVD010000647         1693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2291710, whole genome shotgun sequence.
ACCESSION   DATAVD010000647 DATAVD010000000
VERSION     DATAVD010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2291710"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..265)
                     /locus_tag="VHX39_12085"
     CDS             complement(<1..265)
                     /locus_tag="VHX39_12085"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEX3991900.1"
                     /translation="MSDEVPVATVRTRSELRRRISLIWAIPLITAIVAAWLAWDTLSK
                     RGPEITIRFDSAAGLVANQSHIRLRDVDLGVVGKVALSPDHNHV"
     gene            complement(262..1551)
                     /locus_tag="VHX39_12090"
     CDS             complement(262..1551)
                     /locus_tag="VHX39_12090"
                     /inference="COORDINATES: protein motif:HMM:TIGR00155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqiA/YebS family transporter subunit"
                     /protein_id="HEX3991901.1"
                     /translation="MESVLPTTHPHLLECHECGTIQRLPAMLPNTRALCPHCDAVLRH
                     TRADPFSLPLALNLAALMMFGIGAFWTLLSVSTAGQWRDANLLTGPEELRTFGLWELS
                     VVVLSTTFAAPLVRILSMIVVLAGLRLPHRPPGIRMVFAWIQHVRPWSMVEIFLLGLV
                     VAYVRLSGIAHIDLGPAILALATLTVTMLAADVLLDPQAVWEALDAQKPADAPHPPPA
                     SLLGAAMHRMGCDTCRLVSRGRDGALCPRCGFALHHRKPHSLARTWALVLASLILYIP
                     ANFYPFLTVIRFGSGQPSTILQGVRELMDIGEWPLALLVFFASVTVPVLKLVGLILLL
                     TTTMAGLRTRLRDRTVLYRVLDAVGRWSMIDVFMESILVALVQFGAVVTVIPGPGAIA
                     FASVVILTMLAARTFDPRLIWDRAAEPAARVKASATA"
BASE COUNT          347 a          491 c          602 g          253 t
ORIGIN      
        1 tgacgtgatt gtgatccggg ctcaacgcga ccttcccaac cacgccgaga tcgacgtctc
       61 gcagccggat gtgggactga ttggccacca ggccggcggc gctgtcgaag cgaatggtaa
      121 tttccgggcc gcgcttcgac agtgtgtccc aggccagcca ggccgcgaca attgcggtaa
      181 tcagcggaat agcccagatc agggaaatgc gccggcgcag ctctgatctg gtgcgaacgg
      241 tcgcgaccgg gacctcgtca ctcatgctgt cgcacttgcc ttaacccgcg cagcaggctc
      301 cgcggcacgg tcccagatca gtcttggatc gaaggtgcgg gcggccagca tggtcagtat
      361 cacgaccgag gcaaaagcga tggcgccggg cccagggatg acggtgacga cggcgccgaa
      421 ctgcacgagg gcaaccagga tggactccat gaaaacgtcg atcatcgacc agcggccaac
      481 cgcgtcgagc actcggtata gcacggtgcg atcgcgcagg cgggtccgca ggccggccat
      541 cgtggtggtc agcaacaaga tcaacccaac cagtttcagc accggcacag tgacgctggc
      601 gaagaatacc agtaacgcga gcggccactc gccgatgtcc atcagttcgc gcacgccttg
      661 caagatggtg cttggctggc cggagccaaa ccggatgacg gtcaggaacg gatagaaatt
      721 ggccgggatg tacaggatca gcgaggcaag caccaaagcc caggtgcggg cgagactgtg
      781 gggtttgcgg tgatggaggg cgaagccgca gcgcggacat aaggcgccgt cgcgacctcg
      841 gctgaccaaa cgacaggtgt cacagcccat ccgatgcatg gcggcaccca gcaggcttgc
      901 gggtggaggg tgcggagcat cggcgggctt ttgggcgtcc agcgcctccc acaccgcttg
      961 cggatcgagc aaaacgtcgg ccgccagcat ggtcaccgtc agcgtcgcca gcgccaggat
     1021 cgccggtccg agatcgatat gggcgatgcc gctgaggcgg acgtaggcca cgaccaggcc
     1081 gagtaggaag atctcgacca tggaccaggg acgtacgtgc tggatccagg cgaagaccat
     1141 gcggatgccc ggggggcgat gcggcagacg caaaccggcg agcacaacga tcatactcag
     1201 gatccggacg agtggggccg cgaatgtggt cgacagcacc accaccgaca gttcccacag
     1261 gccgaacgtg cgcagttctt cgggtccggt cagtaggttg gcgtcacgcc actggccggc
     1321 ggtactgacc gatagcagcg tccagaacgc cccgatgccg aacatcatga gagcggcgag
     1381 gttgagcgcc agcggcaggc tgaatggatc ggccctggtg tggcgcagga cagcgtcgca
     1441 gtgcgggcag agggctcggg tgttgggcag catggccgga agacgctgga tggtgccgca
     1501 ttcgtggcac tccagcaaat gcgggtgagt ggtggggagg acggactcca tcgtcggagg
     1561 gtaacgcgct cgggcccggg ggagaaggac ggcggacggt gttccggttg cggcagcctc
     1621 tgggcttggg tataggtttg gatcagggcg cgccggcgta gctcaggggt agagcaactg
     1681 attcgtaatc agt
//
LOCUS       DATAVD010000648         3080 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2292062, whole genome shotgun sequence.
ACCESSION   DATAVD010000648 DATAVD010000000
VERSION     DATAVD010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3080
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2292062"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..762
                     /locus_tag="VHX39_12095"
     CDS             <1..762
                     /locus_tag="VHX39_12095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003619087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX3991902.1"
                     /translation="GPMTRTVADGALMLEVMAGPHHLDYTTLEAWPAAYSARLSDWVG
                     GKKIAYSPDLGVARVDPEVAALVRAAAERFSELGAQVEEVSIPWGAPGPELVRFFWSA
                     HQTGRKPLLERWEKQMDPGLVACIREAENIRVDAYQAARERKMRYIADIHRWFENWDF
                     LLTPSVSVAAFPADKLMPDHWPSHPWDWISWAEFSYPFNMSWNPASNVPCGFTADGLP
                     VGLQIVGKRFDDLGVLQASAAFEAAQPWAQKRPSL"
     gene            complement(819..1967)
                     /locus_tag="VHX39_12100"
     CDS             complement(819..1967)
                     /locus_tag="VHX39_12100"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3991903.1"
                     /translation="MADRLISADNHIDMTYCPPDLWSDAAPKKWAGLVPWTDERDDGL
                     HWIVDGADQGMWNGVGPGFTKYQKGSFAHVDEMKDYGFEWDYRRGAKPRPTTPDLRVA
                     DLDKDGVYAEVIYGCLRINEIIKDHSIRDWADTVYNDWVAAFAKASDPNRVFPLAVIP
                     NTNPKVAAAEVRRCAKLGLRGGDLAFKEMGLPLWHHDWDELWKASAECKFPVSFHSTG
                     FKAVRAPDNPEMEKQYFTEWRLVRSALFQLDTMEVLVSVLASGACERYPDFNFVLGES
                     GVTWLPYVFDRLDTEYEDRGRSIGLKMKPSDYFRRQGYVTYQQDKFLEPIVPLIGEDR
                     IMWGSDYPHPDSLWPDSHKILAENLAKMSKSTQRKIVHDNVAALYNIN"
     gene            2141..2659
                     /locus_tag="VHX39_12105"
     CDS             2141..2659
                     /locus_tag="VHX39_12105"
                     /inference="COORDINATES: protein motif:HMM:NF020909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1993 domain-containing protein"
                     /protein_id="HEX3991904.1"
                     /translation="MAFSIYDASVPICAQQLGALAVIAGKAADHCATNKIEESALLTD
                     RLYPDMFCLARQFRQAADFGRMTPGRLAGVAGPEFAAVDDTSFAAAKKRCEDSVAFIN
                     SLTRAQVDGSEDKVISWMAGGNERKMKGIDYLRQFALPNFFFFCTTAYDILRHRAVVI
                     GKRDFLGPVNWL"
     gene            complement(2693..>3080)
                     /locus_tag="VHX39_12110"
     CDS             complement(2693..>3080)
                     /locus_tag="VHX39_12110"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3991905.1"
                     /translation="VVEHDIFWSRALVGFTDFPQSEKDKYPPSPQRLVRTHPGSKRKT
                     LYLSAHGSHIVGWPVADGRLLLLDLTAHATQQQFVYRHEWHVGDLVIWDNRCTMHRGR
                     PHDETKARDLRRATTLDQGSTLSEAA"
BASE COUNT          575 a          905 c          931 g          669 t
ORIGIN      
        1 ggtccgatga cccgaaccgt tgccgatggc gcgctgatgc tggaagtgat ggccggtccc
       61 catcatctcg attacacaac gttagaggcg tggccagcgg cttattccgc gcggttgtcc
      121 gactgggtcg ggggcaagaa gattgcgtat tcacctgatc ttggtgttgc gcgcgtggac
      181 cctgaggttg ccgctttggt gcgcgccgcc gccgaacgtt tcagcgaact cggagcccag
      241 gtcgaggaag tatcgatccc gtggggtgca cccggtcccg agctggtccg atttttctgg
      301 tccgcgcacc agactggccg caagccactg ctggagcgtt gggaaaagca gatggatccg
      361 ggtctcgttg cctgcattcg tgaggcggag aatattcggg tcgatgctta tcaggcagcg
      421 cgtgaacgca agatgcgtta cattgccgat atccatcgtt ggttcgaaaa ctgggacttt
      481 ctgctgacgc catcggtttc ggtcgcagca tttccggctg acaagttgat gcccgatcac
      541 tggccctcgc atccctggga ctggatttcc tgggctgaat tctcctatcc gttcaatatg
      601 tcgtggaacc cggcatcgaa cgtgccgtgc ggtttcactg cggacgggtt acccgtcgga
      661 ctgcaaattg tcggcaagcg gtttgatgat ttgggtgtgc tgcaggcttc ggccgcgttt
      721 gaagcagcgc aaccatgggc gcagaagcgg ccatcgctgt agttgccaat tcgccatgtt
      781 gcagcccggt cgtactgggc tgcaacatgg atgtggcatt agtttatgtt atacagcgct
      841 gcgacgttat catgcacgat cttgcgttgc gtgctcttgg acatcttcgc cagattctcg
      901 gcgaggatct tgtgcgaatc aggccacaat gaatccgggt gcggataatc cgacccccac
      961 atgatccggt cttcgccgat cagcggcacg atcggctcga ggaacttatc ctgctggtac
     1021 gtgacatagc cttgcctgcg gaaatagtcg ctcggcttca tcttcaggcc gatcgaccgg
     1081 ccgcggtcct catattcagt gtccagccgg tcgaatacgt aaggcagcca cgttacgcct
     1141 gactcaccga gtacgaaatt gaaatccggg taccgttcgc acgcaccgga ggccaatacg
     1201 gagaccagca cctccatcgt gtcgagttgg aacagagcag accgcaccaa acgccattcg
     1261 gtgaagtact gcttctccat ctcgggattg tccggcgcgc ggactgcttt gaagccagtc
     1321 gagtggaaag acaccgggaa cttgcattcg gcgctggcct tccacagttc gtcccaatcg
     1381 tggtgccata gcggcaggcc catctccttg aatgccagat cgccgccgcg caatcccagt
     1441 ttcgcgcaac gtcgcacctc tgcagcggca actttcggat tggtgttggg aatgaccgcg
     1501 agtggaaaga cccggttcgg atcggacgct ttcgcaaagg ccgccaccca atcgttatag
     1561 acggtgtcag cccagtcgcg aatggagtga tctttgatga tctcattgat gcggaggcag
     1621 ccgtaaatga cttcggcgta gacgccatct ttgtcgagat ctgcgacgcg aagatccggc
     1681 gtggttggcc taggcttcgc gccacggcga tagtcccact cgaacccgta atccttcatc
     1741 tcatcgacgt gggcgaacga gcccttttgg tacttggtga accccgggcc gacaccgttc
     1801 cacattccct ggtcggcccc gtcgacgatc cagtgcaggc catcgtcgcg ttcgtcggtc
     1861 cacggaacaa ggcctgccca ttttttcggt gctgcgtcgg accaaagatc cggcgggcaa
     1921 taggtcatgt cgatatggtt gtcggcggag attaatcggt cagccatcag acgctcctgt
     1981 gttgccattg tggcggaagg ccggcagtcg gccttattca ttgcctgcga cgctaggccg
     2041 gccattcctg ggcggcaagt ctggcggcgg caaggtctgg cggcgtccag accgatcgat
     2101 taaggtccgg ccgccaacac caccagcagg agacaatgtc atggcatttt ccatctacga
     2161 tgcgtccgtg ccgatctgcg cgcaacagtt gggtgctctt gcggttatcg ccggtaaggc
     2221 cgccgaccac tgcgccacca acaagatcga ggagtcggcg ctgctgaccg accggctgta
     2281 tccggacatg ttctgcctgg ctcgccagtt ccgtcaggcc gcggatttcg gccgcatgac
     2341 cccgggtcgt ctggccggcg tcgctggccc tgagtttgcg gcagtggacg acaccagttt
     2401 cgcggcggca aaaaagcgct gcgaggattc ggttgctttc atcaactcgc tgacccgcgc
     2461 gcaagtcgac ggttccgagg acaaggtcat ttcctggatg gccggcggca acgagcgaaa
     2521 gatgaaaggt atcgactacc tgcggcaatt cgctcttccg aacttctttt tcttctgtac
     2581 taccgcgtac gacattctgc ggcatcgcgc cgtggtgatc ggcaagcggg acttcctcgg
     2641 cccggtgaac tggctttaac ggggatggcc cccgggtcag gcccgggggc cgttacgctg
     2701 cctcactgag cgtcgaccct tggtcgagcg tggtggcacg acgcagatcg cgcgccttgg
     2761 tttcgtcgtg cgggcgaccg cgatgcattg tgcaacgatt gtcccaaatc accaggtcgc
     2821 caacatgcca ctcatggcgg tagacgaatt gttgctgcgt tgcatgcgca gtcagatcga
     2881 gcagcagtaa cctgccatcc gccaccggcc agccgacgat atgcgagcca tgcgccgaca
     2941 gatataaagt cttgcgtttc gatccagggt gggtgcggac cagacgttgc ggcgacggcg
     3001 ggtacttatc cttctccgac tgcggaaaat cggtgaagcc aaccagagcc cgcgaccaga
     3061 atatgtcgtg ttccaccacg
//
LOCUS       DATAVD010000649         3942 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_989996, whole genome shotgun sequence.
ACCESSION   DATAVD010000649 DATAVD010000000
VERSION     DATAVD010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3942
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_989996"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..976
                     /locus_tag="VHX39_12115"
     CDS             32..976
                     /locus_tag="VHX39_12115"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX3991906.1"
                     /translation="MSNRINRAIQLLAQDQAIYYDGPHSGHVLTFDQGREDAATWADY
                     MNVGMEHGCFDMTGLETYMRGLVAGGPTRSGHRTPAIIVEAPVNGIDEIHVRTSAWQF
                     RQILGRGVHGILLCQAESPAAVRAFVESCRYPHNLLGVDPSLPSPEARLQGAVRPPSR
                     GPLLGIGTRGRGSESTAAPIWGISGEEYMSRCEPWPLNPAGELLLGVKLESPEGIAMA
                     DEICAVPGLGFAEMGPGDLSLSLGSVKLLRDPYPPVMQAARDKVLAACKRNGIGFLEG
                     CTKGNITARLDEGVRVISGHDPEMARIGRTHQKRALPV"
     gene            complement(995..1900)
                     /locus_tag="VHX39_12120"
     CDS             complement(995..1900)
                     /locus_tag="VHX39_12120"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX3991907.1"
                     /translation="MPLTAVMNWFGWQQPPPEEPPHEMHRLDPVVAAELAVPMVADRP
                     PPKWNRDRLKITDALWGQGYQFPGAEIETLRLAKPLGLTKASSLLLLGAGAGGPACSL
                     AINFGAWVSGFEADSDLVATAIDRVARRNLTKHAQTELWDPEEPKFRDGFYHHGMALE
                     ALHGSQPERVLSAVARALKPSGHVVITELVADTPLDPGNPVVAGWAHLERRNAKALPT
                     EVTITRILGRLGFDVRVCEDISERHVSHAMAGWRSLVRLMEDAPPTRREAMSSVQEAE
                     LWLLRLRLFEIGSLRLVRWHAIGGG"
     gene            complement(1967..2302)
                     /locus_tag="VHX39_12125"
     CDS             complement(1967..2302)
                     /locus_tag="VHX39_12125"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3991908.1"
                     /translation="MSTSPYLFSAADHPLCAAGDRLKIREAVTGFGIALRYQERSPNP
                     PGAAEAAWCETGHSIFILSGRIRYRFDDHTIEAGPGDMIHIPAGPQHRHIPSVVGSET
                     VRYVLTEFA"
     gene            2301..3365
                     /locus_tag="VHX39_12130"
     CDS             2301..3365
                     /locus_tag="VHX39_12130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEX3991909.1"
                     /translation="MVGSLPAAGDVVTSAIGVGLTRLERQAQGAPDLARQAQYGRFRH
                     AQTPDWAPRTQPFARPRMTAGERFALGSIALGCLVLGLKSLAWWLTGSVALYSDALES
                     IVNVAASAVALVALRFAARPADANHPYGHDKAEFFSAVIEGVMIVIAALSIFDEAWHA
                     WQTPRTFGLAGQGIALSVAATLINAIWAWALIRAGKRLRSATLNADGRHLVSDVVTAC
                     GVVVGFALTIVTGQQKLDPLVAAATGIYVLWSGASLIRGSVGGLMDMAPDTAELRRIN
                     EVIAEHAAGSIEVHDLRARQAGRLTFLDFHLVVPGSMSVRESHDICDRIEKALMTAME
                     HLAITIHVEPENKAKLHRAR"
     gene            complement(3564..>3942)
                     /locus_tag="VHX39_12135"
     CDS             complement(3564..>3942)
                     /locus_tag="VHX39_12135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3991910.1"
                     /translation="SSDRLTYCGPPHQTVRVRPVALKRALANLVANAESYGGSARVTM
                     VPPEDGTIAVMIEDDGPGIPVEEIDRVFEPFHRLEESRNRETGGVGLGLPIARNMLRA
                     HGGDVVLKNRPEGGLKAIVTLPV"
BASE COUNT          720 a         1272 c         1241 g          709 t
ORIGIN      
        1 tggcggctcg ccaggatgag gaaaccatcc catgtccaac cgaatcaatc gtgccatcca
       61 actcctggcc caggatcagg cgatttacta tgacggcccg cacagcggcc acgtcctcac
      121 cttcgaccaa ggccgcgagg acgccgccac ctgggccgac tacatgaacg tcggcatgga
      181 gcacggctgc ttcgatatga ccggcctcga gacctatatg cgcggcctcg tcgccggcgg
      241 tccgacccgt tccggccacc gcacccccgc catcattgtc gaggcgccgg tcaacggcat
      301 cgacgagatc catgttcgga ccagcgcctg gcaattccgc caaatcctgg gacgcggcgt
      361 gcacggcatc ctgctgtgtc aggccgaatc acccgctgcg gtccgtgctt tcgtcgaatc
      421 ctgccgttat ccgcacaacc ttctgggcgt cgacccatcc ctgccctccc ccgaggctcg
      481 acttcaggga gccgtccgcc cacccagccg cggcccgctt ctgggcatcg gcacacgggg
      541 acgcgggtcg gagtcgaccg cggcgccgat ctggggcatc tcgggcgaag agtacatgag
      601 ccgctgtgag ccctggccgc tgaaccccgc aggtgaactg ctgctcggcg tcaagctgga
      661 aagtcccgaa ggcatcgcca tggctgacga aatctgcgcc gttcccgggc tgggatttgc
      721 cgagatggga cctggcgatc tcagcctctc gcttggcagt gtgaaattgc tgcgcgatcc
      781 ttatccgccg gtgatgcagg cagcccgcga caaggtcctg gcggcgtgta agcgtaacgg
      841 catcgggttc ctcgaaggtt gcacaaaggg gaacatcacc gcccgtcttg acgagggcgt
      901 gcgggtgatc tcaggacacg acccggagat ggcgcgcatc ggccgcacgc atcagaaacg
      961 cgccctgccg gtctgaccca atccggcgct ccgctcagcc gccaccgatc gcgtgccacc
     1021 gcaccaaacg gagcgagccg atttcgaaca accgcaggcg aagcagccat aactccgcct
     1081 cctggaccga gctcattgcc tctcgccggg ttggcggcgc gtcttccatg agccggacca
     1141 ggctgcgcca gccagccatc gcgtggctga catggcgctc cgatatgtcc tcacagaccc
     1201 gaacatcgaa gcccagacgg ccaagaatgc gggtgatcgt gacctctgtc ggcagtgctt
     1261 tggcgttgcg gcgctccaaa tgcgcccatc cggcgaccac cggattaccc ggatcgagag
     1321 gcgtgtcggc aaccaactcg gtgatcacca cgtgaccgct cggcttcagt gcccgtgcca
     1381 cggccgagag gacccgttcc ggctggctgc catgcaacgc ctccaacgcc atgccatgat
     1441 gatagaaacc gtcgcggaac ttcggttctt cggggtccca gagttcggtc tgagcatgct
     1501 tggtcaggtt tctgcgtgcc acccgatcga tagcggtcgc cacaaggtcg gaatcagcct
     1561 caaagccgct gacccacgcg ccaaaattga tcgccaacga acaggcggga ccaccggcgc
     1621 cggcgccaag taacagcagg ctggaggcct tggttaatcc cagcggtttg gccagtcgta
     1681 aggtctcaat ttcggcgccc gggaattgat aaccctggcc ccacagagca tcggtgatct
     1741 tgagacggtc gcggttccat ttcggcggcg gccggtccgc gaccatcggt accgccagct
     1801 cggccgcaac aactggatcg agccggtgca tctcatgcgg cggctcttcc ggtggcggct
     1861 gttgccatcc gaaccagttc atcacggcgg tcaacggcat cgcctgcacc tccggacgag
     1921 aaggtgcctt ggagaggttt ataaagtgct aagattaccg gccggttcac gcaaattcgg
     1981 tcagcacgta gcgcacggtc tcggaaccaa cgacgctcgg gatgtggcga tgctgtgggc
     2041 cggcgggaat gtggatcatg tcacccggcc cggcctcgat ggtatggtca tcgaaacggt
     2101 agcggatgcg gcccgataga atgaaaatgg aatggccggt ttcgcaccac gctgcctcgg
     2161 cagcgcctgg cgggttgggg gagcgttcct ggtagcgcag ggcgatacca aaaccggtca
     2221 cggcctccct gatcttcaac cggtcgccgg cggcgcacaa aggatggtcg gcggcggaga
     2281 acaagtaagg gctggtgctc atggtcggca gtttgcctgc ggccggagac gttgtcacat
     2341 ctgccatcgg cgtcgggttg acgcgacttg aacgccaggc ccagggtgcg ccggatttgg
     2401 ccaggcaagc ccagtacgga aggtttcgtc atgctcagac gccggattgg gcgccgcgca
     2461 ctcaaccatt cgccaggccc agaatgaccg ccggagaacg tttcgcactc gggagcatcg
     2521 cgctggggtg cctggtgcta ggactgaaga gcctcgcctg gtggctgacc ggcagtgtcg
     2581 cgctttattc cgacgcgctc gagagcatcg tcaatgtcgc ggcgagcgcc gtcgccctgg
     2641 tggcgttgcg gttcgctgcc cgcccggccg acgccaacca tccctatggc catgacaagg
     2701 ccgagttctt ctcggcagtg atcgaaggcg tgatgatcgt gatagcggcg ctgtcgattt
     2761 tcgacgaggc gtggcacgcg tggcagacgc cgcggacgtt tggcctggcg ggacaaggca
     2821 tcgcgctcag tgtcgccgcc acactgatca acgcgatctg ggcctgggcg ctgatccgtg
     2881 ccggcaaacg gctgcgctcg gcgacgctca atgccgacgg gcggcacctg gtgtcggacg
     2941 tggtgaccgc gtgcggtgtg gtagtgggat tcgccctgac aattgtaacg gggcagcaga
     3001 agctggatcc gctggtcgcg gcggcaacgg gaatttacgt gttgtggtcc ggggcttcgc
     3061 tgatccgcgg ctcggttggc gggttgatgg acatggcccc tgacacggcg gaacttcgcc
     3121 gcattaatga ggtgatcgcc gagcatgccg ccggctcgat cgaggtgcat gacctgcgcg
     3181 cgcgccaggc tgggcgcctg acgtttctgg actttcattt ggtggtgccg gggtcgatgt
     3241 cggtccgcga atcgcatgat atttgcgaca gaattgaaaa agcactcatg accgcgatgg
     3301 agcatcttgc gatcacgatc catgttgaac cggaaaacaa ggcgaagctg catcgggcca
     3361 ggtagcctgt ggtacccaca attactttcg tcatccccgc gctcgtcgcg gggacctgta
     3421 gcagcaccct gccgcgactg tccccggaac aagtccagga acaagtccgg ggatgacgaa
     3481 cgggtgtgtc actattcaac gattctgggc gcggcacatt ggggttttga cggattgccg
     3541 atcacgccca tgcgttccgg atatcacacc ggtaacgtga caatcgcctt tagcccaccc
     3601 tcgggccggt tcttcagcac aacgtcccca ccgtgcgccc gcaacatgtt ccgcgcaatc
     3661 ggcaatccca gccccacgcc gccggtttcg cgattgcgac tttcttcgag gcgatgaaac
     3721 ggctcaaaca ctcggtcgat ttcttccacc gggataccgg gaccgtcgtc ctcgatcatg
     3781 acggcgatcg ttccatcctc cggcggcacc atggtcaccc gggccgaccc gccataactc
     3841 tcggcattcg caacaagatt ggccaaggcg cgtttcagcg ccaccggccg cacccgcacc
     3901 gtctgatgag gcggcccgca ataggtcaga cgatccgacg ag
//
LOCUS       DATAVD010000650         5286 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1362001, whole genome shotgun sequence.
ACCESSION   DATAVD010000650 DATAVD010000000
VERSION     DATAVD010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5286
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1362001"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..833)
                     /locus_tag="VHX39_12140"
     CDS             complement(<1..833)
                     /locus_tag="VHX39_12140"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX3991911.1"
                     /translation="MASKIRVGIVGASPNRGFASISHIPALQALPDFEIVAVCTSSQQ
                     SADAAAKHYGVPLAFADSAALAAHPDVDVVTVSVKVPDHYQPVMAAIEAGKHVYSEWP
                     LGRDTAEAIRLRDAAEQRDVRNVVGLQGQVSPAINYVKDLIAEGHIGRVLSATLFVNA
                     GNWGKTIERAYQADRANGANLMTITGGHNLDLLCHCLGEFRELSAFAVSQRDRIPLHG
                     TGEMIAKNVPDQLVVSGIVGDGAVVSCQVRGGMTRGHEFLCEIHGEDGDLVMEATSRA
                     ST"
     gene            1104..1433
                     /locus_tag="VHX39_12145"
     CDS             1104..1433
                     /locus_tag="VHX39_12145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX3991912.1"
                     /translation="MAVKPNPSREAVRAVVPRMIELSETVIYGDIWERPGLSKRDRSL
                     IVVAALVASYRPDQLRGHLGRALDNGVTKDEIAEIITHLAFYSGWPGSMTAARIAKEV
                     YEERGLL"
     gene            1479..1805
                     /locus_tag="VHX39_12150"
     CDS             1479..1805
                     /locus_tag="VHX39_12150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991913.1"
                     /translation="MDKHELTAWALANGWQMLAGCPSLTRPARPQEAIVRLSLKATVA
                     NVEIKKPAGKWEKVSGQPYAKIQPDPDTGLPLGLGLDTIPGFTMLMRENKDRMTFARM
                     TGTPGS"
     gene            complement(1818..2192)
                     /locus_tag="VHX39_12155"
     CDS             complement(1818..2192)
                     /locus_tag="VHX39_12155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6481 family protein"
                     /protein_id="HEX3991914.1"
                     /translation="MRSNAYKNDSFSNRLASSADAKNALLERFRARPGPDDPAVVARR
                     AAQAAIEAAREIRVAERKAAREAEAARLAAEQAAQEELRKAQDVELLARKAEEAARAV
                     ERAAAAKAARDARYAARRARRR"
     gene            2522..2809
                     /locus_tag="VHX39_12160"
     CDS             2522..2809
                     /locus_tag="VHX39_12160"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3991915.1"
                     /translation="MDRSSLSVANPLIRKDLGLTIANMVMLLSAFLCTYAVFQLPAGA
                     LVDRIGPRRLLGAGTFHPGTGLAHRHLRRSAFGARIDGSQQVRPDAKQPFP"
     gene            complement(2778..3728)
                     /locus_tag="VHX39_12165"
     CDS             complement(2778..3728)
                     /locus_tag="VHX39_12165"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX3991916.1"
                     /translation="MTDVQAVVVDPSGNERLAIKSVPLAPAFRDEVTVRVRAISLNRG
                     EVNRAVRSADPGWRPGWDFVGTVEETAPEGGGPAKGTRVVGILPSGAWAETVRAPKDA
                     VAALPDGVTDAQAATLPVAGLTALHALRQGGLLLGRKVLIDGASGGVGHFACQLAAAS
                     GAIVHGHVRNAKFRSMVAEWCGDRTIVAPDLSAAASFGPFHLILDSVGGSALGSALGM
                     LRPDGTCVTFGVSESQNATFDSGAFFRSGGSRLYGLVLFPELKKVEPASEGLALLAGL
                     IARGTLRPQIEIEASWTEIGAVARQLLDRSFMGKAVLHLA"
     gene            complement(3774..4856)
                     /locus_tag="VHX39_12170"
     CDS             complement(3774..4856)
                     /locus_tag="VHX39_12170"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX3991917.1"
                     /translation="MSITQMEDVRISHPEPLRAQRIAWVVLALALTCLGLWTLKEFLG
                     ALAWAGVLAVAFWPSYQAIRQRWPFEQSHILLPLLFTLGIGLVFVLPIVLAGMQAGKE
                     ARTVVAWIDSARRNGIPVPELIGRLPIYAGRTRDWWQQNLSDPDAASDFLTHLWNPQY
                     VLAGRQVGVAILHRTVMFGFCLLTLFFLFRNGDGLAAQLRHAGARAFGAGAERIGRQT
                     IASIHATVNGLVLVGLAEGLVLYVAYLMTGVPRPALLGAATAVGAIIPFGAPFFFGIA
                     ALLALAQGSMAGAIAIVVVGALTTFVADHFVRPVVIGSATRLPFIWVLFGIFGGVETW
                     GLLGLFLGPAIMSVLILLWREWTETT"
     gene            4936..>5286
                     /locus_tag="VHX39_12175"
     CDS             4936..>5286
                     /locus_tag="VHX39_12175"
                     /inference="COORDINATES: protein motif:HMM:NF015682.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HEX3991918.1"
                     /translation="MYVLNDPPPQIDPVLIEQLLQAEPATIGHFRHHGFMTPEIRLPL
                     PGYRTVAGTAVTVRSYGADTSIVHYALGLLRPGDFLVIDRSGDTRHAVCGGGVAFSAK
                     AAGCVGIVIDGPATD"
BASE COUNT         1049 a         1699 c         1616 g          922 t
ORIGIN      
        1 gtcgaggcgc gagatgtcgc ttccatcacc aggtcaccat cctcaccgtg aatttcgcac
       61 aggaattcgt gccctcgggt catgccgccg cgcacctggc aagataccac cgcgccatcc
      121 ccgacaatgc cgctgacaac aagctggtcg ggcacattct tggcgatcat ctccccggtg
      181 ccgtgcaagg ggatgcggtc gcgttggctg acggcaaaag ccgacagttc acgaaattcg
      241 ccgaggcagt ggcagagcag gtccaggttg tggcccccgg taatcgtcat caggttggca
      301 ccgttggcgc gatcggcctg gtaggctcgc tcgatcgtct ttccccagtt gccggcgttg
      361 acaaacaacg ttgctgataa tacgcggcca atatgacctt cggcgatcag gtccttgaca
      421 taattgatcg ccggcgagac ctggccttgc agtccaacca cgttgcggac gtcgcgttgt
      481 tcggccgcgt cacgcagtcg gatggcttcg gcggtgtcgc gcccgagcgg ccactcgctg
      541 tagacgtgct tgccggcctc gatggcggcc atcacgggct ggtaatggtc gggcaccttc
      601 acgctgaccg ttacaacgtc cacatcggga tgcgccgcga gcgctgcgga atcggcaaac
      661 gccaacggaa caccataatg tttcgccgct gcgtcggcgg attgctggct ggatgtgcaa
      721 acagcgacaa tctcgaaatc cggcaatgcc tgcagcgcgg gaatgtggga aatcgaggcg
      781 aagccacggt tcgggcttgc accgacgatg ccgacgcgaa ttttgcttgc catggacacg
      841 gtttcccctc gatcgcggtt tatgctggcg cgcaagctgt tccggtcgtc ggattttggc
      901 aagccaccgc gcgcgagggt attttctttc gttgcagcaa acccggggac gacctgctcc
      961 gggcaggagg cctgattcta cccgcacgac gcgacgcaac cagctgatcg gtaaatgcaa
     1021 caatcggccg atcctgggcg tgctatggcc gcgcctgccg ggtcgggtta ggttgtcgtg
     1081 aaccaccaca aaaggagcag gaaatggccg tcaaacccaa tccttcgcgt gaagccgttc
     1141 gcgcagtcgt ccccaggatg atcgaattat cggagactgt catatatggt gatatatggg
     1201 aacgtccggg actgagcaag cgtgaccgga gcctgatcgt ggttgcggca ttggtcgcgt
     1261 cataccggcc cgatcagctc cgagggcatc tcgggcgcgc gttggacaac ggcgtcacca
     1321 aagatgagat tgcggaaatc attacccatc tggcgttcta ttccggctgg cctggatcga
     1381 tgaccgcagc tcggattgcg aaagaagttt atgaggaacg cggtctgctg tgatctgcgg
     1441 gcgacgccgc ctcggtcttt gcacgaaaag gacgcgatat ggacaagcat gaactgaccg
     1501 cctgggcatt ggcgaacggt tggcaaatgc tcgcggggtg cccgagcctg acccggccgg
     1561 cgcgacccca ggaggcgatc gttcggctgt cgctcaaggc gaccgtcgcc aatgtcgaga
     1621 tcaagaagcc ggcgggcaag tgggaaaagg tgtcgggcca gccctatgcg aaaatccaac
     1681 ctgacccaga taccggcttg ccgttgggcc tgggtctgga cacgattcca gggttcacca
     1741 tgctgatgcg ggaaaacaag gaccgtatga cgttcgctcg gatgaccggg acgccgggca
     1801 gttagatcgg gaccggttta acggcgccgt gcgcgacggg cggcgtagcg tgcgtcgcga
     1861 gcggccttgg cggcggctgc ccgttcgacg gcgcgcgcgg cctcctcggc cttgcgagcc
     1921 agtagctcga cgtcctgggc tttccgcaat tcctcctgag ctgcctgctc ggcggccagt
     1981 ctggctgctt cggcttcacg ggccgcctta cgctcggcga ctcgtatttc gcgggcagct
     2041 tcgatcgccg cctgcgctgc ccggcgcgct actacggccg gatcgtcggg gccgggccgt
     2101 gcgcggaatc tctcgagcaa ggcgttcttc gcatccgccg acgacgccag acggttggag
     2161 aagctatcgt tcttataagc gttggatctc ataccgaact tttatacggg aaattgccga
     2221 atgggcatag gccttgggtg caagcctgcc atgccgctgc aattcacatc caccggtcct
     2281 gacttttctt tagtacgtgc ctgcactttg gcgtcatccc cggcatcccc aaaccggcag
     2341 ccggggcttg ccgccgggtc gactgtcatc gcgaacccag gcagggtccg actcggaaac
     2401 gaaccgtcgg gatgccgatc ccgaccaagg agcattgcgg tggccgccgt tgtcgcatcg
     2461 ccgcgactta aacagatcca gcgaagttcg gtcacgctgc aggtttaggg ccctgaatta
     2521 cgtggatcgt tcgtctctct cggtcgccaa tccgctcatc cgcaaagacc tcggactgac
     2581 gatcgccaat atggtgatgc tgctgtcggc tttcctgtgc acctatgccg tgttccagct
     2641 tcccgccgga gcactggtcg accgaattgg tccgcgcagg ctgctcggcg ccggcacctt
     2701 tcatccaggt actgggctgg cacatcgcca ccttcggcgc agcgcgtttg gggctcgtat
     2761 cgacggcagc cagcaagtca ggccagatgc aaaacagcct ttcccatgaa gcttcggtcc
     2821 agtagttgcc gcgccaccgc accgatctcg gtccatgacg cctcgatttc aatctgtggc
     2881 cgcaacgtcc cccgtgcaat caggccagcc agcaacgcaa ggccttcgga cgcgggctcg
     2941 accttcttca attcagggaa cagcaccaat ccataaagcc gcgagccgcc cgaccgaaag
     3001 aacgccccac tgtcgaaggt ggcattttga ctctcagaga cgccaaacgt cacgcaggta
     3061 ccatcggggc gcaacatccc gagcgccgag ccaagcgccg acccgccgac ggaatccagg
     3121 atcagatgga atggtccgaa cgacgcggcg gcgctcagat cgggtgccac aatcgttcta
     3181 tcgccgcacc attcagccac catgctgcga aatttcgcgt tccgcacgtg accatgcacg
     3241 atcgcacccg acgccgcagc gagctgacag gcgaaatgcc cgaccccacc ggacgcacca
     3301 tcgatcagca ccttccgccc gagcaacaac ccgccctgcc gcaacgcgtg cagcgcagtc
     3361 agcccagcga ccggcaacgt cgccgcctgg gcatcggtca ccccatccgg caatgcagca
     3421 acggcgtcct tcggtgcacg aacggtttcc gcccaggcgc cggatggcag gataccaacc
     3481 acacgggttc ctttggccgg accgccgccc tcgggagcgg tctcctcgac ggtgccaacg
     3541 aagtcccaac ccggccgcca gccggggtcg gctgaacgca cggcgcgatt gacctcgcct
     3601 cggttcaacg agatggcccg taccctgacc gtaacctcat cgcggaaggc cggcgcgagc
     3661 ggcaccgact ttatggcgag gcgttcattg ccggagggat cgacgacgac ggcttgcaca
     3721 tcggtcatgt ggttatctcc ctaagttgat agtcccgcga tgcggaatat gcgtcaggtg
     3781 gtctcggtcc actcgcgcca cagcaggatc aacaccgaca tgatcgcggg tcccagaaac
     3841 aggcccagca ggccccaggt ctcgacaccg ccgaagatac cgaacaacac ccagatgaac
     3901 ggcagccggg tcgcgctgcc gatcacgaca ggacggacaa aatggtccgc gacgaacgtg
     3961 gtcagcgcgc caacaacaac gatcgcgatc gcccctgcca tcgaaccctg ggccagcgcc
     4021 aacagggcgg cgatgccgaa aaagaatggt gcgccgaacg ggatgatcgc cccgaccgct
     4081 gtcgcggcac ccagcaacgc tggacgcgga acgccggtca tcaaataggc cacatacaga
     4141 acaaggccct cggcgagtcc caccaggacc aggccattca ctgtggcatg gatcgaggcg
     4201 atcgtttgcc ggccgatccg ttccgctcct gcgccgaatg cgcgcgctcc ggcatggcgt
     4261 aactgcgccg ccaggccgtc gccgttccgg aacagaaaga acagcgtcaa caggcaaaag
     4321 ccgaacatca ccgttcgatg caggatcgca actccaacct gacgaccggc gagcacatat
     4381 tgcgggttcc aaagatgcgt caggaaatct gacgccgcgt cagggtcgga caggttctgc
     4441 tgccaccaat cgcgggtacg gccggcgtat attggcaggc gcccaatgag ttccggcacg
     4501 gggatgccat tacgccgcgc gctgtcgatc caggcgacga cggttcgcgc ctctttcccg
     4561 gcctgcatgc ctgccagaac gatcggcagc acgaagacca acccaattcc cagagtgaac
     4621 agcagaggca gcaggatgtg gctctgctca aacggccagc gctgccgaat tgcctgatac
     4681 gatggccaaa aggcaactgc cagaaccccg gcccatgcca gggcgccaag gaactccttc
     4741 aacgtccata accccagaca ggtcagcgcc agggcaagga caacccacgc aatgcgttgc
     4801 gcgcggagcg gctcgggatg gctgattcgg acgtcctcca tttgggtaat ggacacgaca
     4861 gtggcgtgac gaacaagacc tcctcggcaa gctgccgccg caaggccccc cgccaccaac
     4921 cagggagcac ctaccatgta cgtgctgaat gacccgccgc cgcagattga tccagtgctg
     4981 atcgagcaac tgttgcaagc cgagccggcg acgatcggac attttcggca tcatggcttc
     5041 atgacgccgg agatcaggct gccgctgccg ggctatcgaa cggtggcagg aacagcggtg
     5101 accgtacgca gttacggagc ggacacctca atcgtgcatt atgctctggg tttattgcgg
     5161 ccaggcgatt tcctggtgat cgaccgatcc ggcgatacgc gccacgcggt gtgcggcggg
     5221 ggcgtggcgt tctcggccaa ggcggcggga tgtgtgggga tcgtcatcga cggaccggcg
     5281 accgat
//
LOCUS       DATAVD010000651         6858 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1735706, whole genome shotgun sequence.
ACCESSION   DATAVD010000651 DATAVD010000000
VERSION     DATAVD010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6858
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1735706"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /locus_tag="VHX39_12180"
     CDS             <1..185
                     /locus_tag="VHX39_12180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991919.1"
                     /translation="KTVAQGAATQVYVAINPGVAKVSGEYFANCNVALPRADALSAAT
                     AKRLWEVSEEIVAALP"
     gene            423..1271
                     /locus_tag="VHX39_12185"
     CDS             423..1271
                     /locus_tag="VHX39_12185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991920.1"
                     /translation="MRRQRKIYEVTAKHRPTVARRAVLSWLPVLFGPSLARARAAEPV
                     RIVYDVFANPPLICGNGTAIDPTMPGLTIEMLRMASERANVPIEFSRTPWQRGLYLVE
                     TGQADAIFASSFVQERQRYGVYPLRDGRPDTRRKLFDQSYSLYVRGESLVGWDGESLI
                     NLHAPVGATPGYAVVPVLRAMGVAVEEEPSHIANLRKLVAGRLDAYAELETQIRPMLR
                     NDQAEFAGIAELSPPVLTKPYYLMFSKIFYSKTPDIAERIWDEIAAVGSTTAYQDLLA
                     RGNCAN"
     gene            1278..3722
                     /locus_tag="VHX39_12190"
     CDS             1278..3722
                     /locus_tag="VHX39_12190"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3991921.1"
                     /translation="MTGSIVTRLFRVAFGLYIVVAVFLNILLVGREYVDTKATIQREL
                     ETYQGVFGAALADALWSMDRDKLDAIAGGIVAVPEITELRVIDPTNGHVFVSAFNLDG
                     AITMRHEGQDRDSRLAPLDVAGSSRYGFDLVYHHETGSSVVGHAEFVSGQSYLLHQII
                     GRTLLIIAAAVLKEAVLWGIFLIVGRRYLRRPLTALFRAIDATTPESPTPITLSRADE
                     RVTAGTELGVIRDSFNALIARIDRDRGHLAALNASLEQNVASRTAQLEQATERAEKAR
                     ELAEAASMAKSQFVANMSHEVRTPINGVLGMNGLLLDTTLDPEQREYAMMVERSAKAL
                     LRIVDDILDISKLDAGKLALETADFDLTDTVENAVLLFKPRAREKGIELAAWIDPAIE
                     RSRSGDPMRLRQILLNLVGNAIKFTESGTVSVCVVPPDLAPSPTRVRFEVTDTGKGIE
                     EPAHLFERFSQEDSSITRRYGGTGLGLAICRELVTLMGGEIGVSSRRGAGSTFWFELN
                     LETARFEPVRQLEGPPTTPQGRSRPLRILVAEDHAINQMFMAALLRKAGHTVTMVENG
                     NQAVAAVRDGDYDVILMDVQMPELDGVEATKQIRAMPSPKHLVTIIALTAHAMHGAKE
                     EYIAAGMDDFVSKPIDAALLLDKLARLPRGSRSSLPVVPEAASAEPVADDLGSDLAEQ
                     DHVRPVFDPARLKAVLGFLPPGQLREFALLYLEDAADCANRIVAAAADGDCGAVGRAA
                     HQLVGVAGNYGAMETCHLAKLLAASGKSGDDATCRRLAPLLPEATERAASWLRAWLDD
                     AHLDAPADPDLATAER"
     gene            3816..4868
                     /locus_tag="VHX39_12195"
     CDS             3816..4868
                     /locus_tag="VHX39_12195"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-terminal binding protein"
                     /protein_id="HEX3991922.1"
                     /translation="MAWWWHYAATSINRGIVMAMRILWPNITADMVSIAAEAVGPEFG
                     TTFHGNASEVTDEEWANADAVVGSCPPQYIDKLRNCRIFVKFGVGYDDVDIERFGKLG
                     IPVCNTPDYGTREVADHAIALMMTLAKGTAYHDQELRADLRSNWRPAHNPFGRRLSVC
                     TFGVVGMGRIGTAAARRAKAFDMDVVFYDPYQPNGYQFAIGVRRADSLAELMGQCDFV
                     SVHAPLTTETRGLIGANAFAAAKKGMILINTARGPVVDIDALYDAMKDRTVLAAGLDV
                     LPEEPANPQRRLIDAWQKNEDWIRHRLVVTPHSAFYTPESMRDNRAFASRTAARFLRE
                     GRLENCVNKQFLVAKG"
     gene            5136..5330
                     /locus_tag="VHX39_12200"
     CDS             5136..5330
                     /locus_tag="VHX39_12200"
                     /inference="COORDINATES: protein motif:HMM:NF022603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2934 domain-containing protein"
                     /protein_id="HEX3991923.1"
                     /translation="MSQSKPRPRRKSKSTSPAKTINLSEQEMRDAAYYLWVQEGRPEG
                     RALDHWLQASGQRGDNMSVR"
     gene            complement(5578..5763)
                     /locus_tag="VHX39_12205"
     CDS             complement(5578..5763)
                     /locus_tag="VHX39_12205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991924.1"
                     /translation="MEYVVEIESGAGERAVKEYDASSAYELNFVVRHDLRQYPAFRVV
                     RASPKTDPGRQVFITTP"
     gene            complement(6606..>6858)
                     /locus_tag="VHX39_12210"
     CDS             complement(6606..>6858)
                     /locus_tag="VHX39_12210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991925.1"
                     /translation="SLVNQNISKAGSKTEPSVGILVRIPPHGHLLTIGSSVRKIKYTT
                     LHRSPADQATINQGQTIIRNIAVRAERIVGCVFRMSNRG"
BASE COUNT         1337 a         2038 c         2106 g         1377 t
ORIGIN      
        1 tcaagaccgt ggcgcagggc gcggccacgc aggtttatgt ggcgatcaac cccggggtgg
       61 cgaaagtgtc cggcgaatac ttcgctaact gcaatgtcgc cctgccacgc gccgatgccc
      121 tgtccgcggc gacggcaaaa cgattgtggg aggtgtccga agagatcgtc gcggcgctgc
      181 cgtgaccgcg atgtcgcggc aagcgcctcg cgatcgagcg taagattccc gtaaccgggt
      241 tttgactaga accagccggc gacaggaccg ataagttcgt gactcgcgcc gggcactgaa
      301 gatgtcggcg gagcgacgtg gaccggcccc tgactcttcg acgaggccga ggattttggc
      361 accggacacc ctgatcgaaa tcttgcgcgc acccgtccgg ctatggctca gaggcgagtg
      421 acgtgcgacg tcagcgaaaa atctatgaag tgaccgcaaa gcaccgccca acggtcgccc
      481 gccgcgcagt gctgtcgtgg ctgcccgttc tgttcggacc gtcgctcgct cgggcccgcg
      541 ctgccgaacc ggtccgcatc gtttatgacg tctttgcaaa cccgccgctc atctgcggca
      601 acggcacggc gatcgatcca accatgcctg gcttgaccat cgagatgctg cgcatggcca
      661 gcgaacgggc caatgtcccg atcgaatttt cccgcacccc atggcagcgt ggactttatc
      721 tggtcgagac cgggcaggcg gacgcgatct tcgcctcgag cttcgtccag gagcggcagc
      781 ggtacggggt ctacccgctc agggatggcc ggccggacac gcggcgaaag ctattcgatc
      841 agtcctatag cttatacgtc cgaggcgagt cactcgtcgg ctgggacggc gagtcactga
      901 tcaatctgca tgcaccggtt ggagcaacgc caggttatgc agtggttccg gtgttgcgcg
      961 cgatgggtgt ggcggtcgag gaggagccga gccacatcgc caatctgcgc aagctcgtcg
     1021 ccggtcggct ggacgcctat gccgagcttg aaacccagat ccggcccatg ttgcggaacg
     1081 accaggcgga attcgccggc atcgccgagc tgtcgccgcc ggtcctgacc aagccgtact
     1141 atttgatgtt ctcgaaaatc ttctattcca aaacgcctga catcgccgag cggatctggg
     1201 acgagatcgc cgcagtcggc tccaccaccg cctaccagga tttgctggcg cgcgggaact
     1261 gcgcgaactg atagatcatg accgggtcga tcgttactcg attgttccgg gtcgcctttg
     1321 gcctctatat cgtcgtcgcc gtcttcctga acatcctgtt ggtcggccgc gagtacgtcg
     1381 ataccaaagc gacgatccag cgtgagctgg agacgtatca aggggttttc ggcgctgctc
     1441 tcgccgatgc gttgtggtcg atggaccggg ataagctcga cgcgatcgcc ggtggcattg
     1501 ttgcggtccc tgaaatcacc gaattacggg tcatcgatcc aacaaacggc catgtattcg
     1561 tcagcgcctt caatctggac ggcgcgatca ccatgaggca cgaggggcag gaccgggaca
     1621 gccggctggc accgctggac gttgcgggat ccagccgtta cggattcgac cttgtctacc
     1681 accacgagac aggtagcagc gtggtcggac acgccgaatt cgtgtcggga cagagctacc
     1741 tgctgcacca gatcatcggc cgcacgctgc tgatcatcgc ggccgccgtg ctcaaggaag
     1801 cggttttgtg gggcatcttc ctgatcgtcg gccggcgtta tctgagacgc ccgctgaccg
     1861 cgttgttccg cgcgattgac gccaccacgc ccgagagccc gacaccgatt actctgagcc
     1921 gcgcggatga acgcgtcacc gccggcaccg aactgggcgt tatccgcgat tcgttcaatg
     1981 cactgatcgc gaggatcgac cgggaccggg gtcacctcgc ggcgctcaac gccagcctcg
     2041 agcagaacgt ggccagccgc acggctcagc tcgaacaggc gacggagcgt gcagagaagg
     2101 cgcgcgaact tgccgaagcg gcgagcatgg ccaaaagcca gttcgtcgcc aacatgagcc
     2161 acgaggtccg gacgccgatc aatggcgtgc tcgggatgaa cggtctcctg ctcgacacca
     2221 cgctcgatcc ggagcagcgg gaatacgcga tgatggtgga gcgctccgcc aaggcgctgt
     2281 tgcgcatcgt cgacgacatc ctcgacattt cgaaacttga cgccggaaag ctcgcactcg
     2341 aaacggccga tttcgacctg accgacactg tcgaaaatgc tgttcttttg ttcaaaccga
     2401 gggcgcggga gaaaggcatc gagttggccg cgtggatcga tccggcaatt gaacggtctc
     2461 gtagcgggga tccgatgcgg ttgcgtcaga tcctgctgaa cctcgtcggc aacgccatca
     2521 agtttactga aagcggtacc gtatcggtgt gcgtggtgcc tcccgacctt gcaccaagcc
     2581 ccacgcgtgt gcggttcgag gtcaccgata ccgggaaagg catcgaggaa ccggcccatc
     2641 tgttcgagcg attcagccag gaggatagct cgatcactcg tcgttacggt ggcaccggtc
     2701 ttggtctcgc catttgccgg gaacttgtga cgctcatggg gggagaaatc ggggtttcaa
     2761 gccggcgcgg cgccggttcg accttctggt tcgagctgaa cctggaaacc gcccggttcg
     2821 agccggtgcg acagttggag gggccgccca ccacgccgca ggggagatcg cgcccgctgc
     2881 gcatcctcgt tgccgaagat cacgcgatca atcaaatgtt catggcggct ctgctgcgta
     2941 aggccggcca caccgtgacg atggttgaaa atggcaatca ggctgtcgcc gcggtccgcg
     3001 acggcgatta cgacgtcatc ctgatggacg tgcaaatgcc ggaactcgac ggcgtcgagg
     3061 ccacgaagca gatccgcgcc atgccgtcac cgaagcatct tgtcacgatc attgcgctga
     3121 ccgcgcatgc catgcacggt gccaaagagg aatatatcgc cgccggcatg gatgatttcg
     3181 tttcgaagcc gatcgacgcg gcacttttgt tggacaagct cgcccgcctg ccgcggggtt
     3241 cgagatcttc gctgccggtt gttcccgagg ccgcgtccgc cgagcccgtt gccgacgatc
     3301 tgggctctga tttggctgaa caagatcatg tcaggccagt attcgatccc gcccggctca
     3361 aggcggtttt gggattcctg ccacctgggc aactgcgcga atttgcactg ctctatcttg
     3421 aagatgccgc cgattgcgcc aatcgcatcg tcgcggcggc tgccgacggc gattgcggcg
     3481 cggtaggtcg cgcggcgcac cagcttgttg gggtcgcggg caattacggt gcaatggaaa
     3541 cctgccatct tgccaaatta ctcgctgcct ccggaaagtc cggcgacgac gcgacctgcc
     3601 ggcggctcgc gccgctgttg ccggaggcga ccgaacgtgc tgcgagctgg ttgcgcgcct
     3661 ggctcgacga tgcgcatctg gacgcaccgg cggacccgga tttggcgacg gctgagcgct
     3721 gaacggcaac gccaatccgc atctccgcgc caggctgatc ggaagccgcc caggttttaa
     3781 cctggcgttg ccgttccgtg ccggatttgt agggcgtggc atggtggtgg cactatgccg
     3841 cgacatcaat caaccgaggg atcgtcatgg cgatgcgcat tctctggccg aatattacgg
     3901 ccgatatggt ttcgattgcc gccgaggcag tcggccccga gttcgggact actttccacg
     3961 gcaacgcgtc agaggtgacg gatgaagagt gggccaatgc cgacgccgtc gtcggctcct
     4021 gcccgccgca atacatcgac aaactgcgca attgccggat cttcgtgaag ttcggcgttg
     4081 gctacgacga tgtcgacatc gagcgcttcg gcaaactggg catcccggtc tgcaacacac
     4141 ctgattacgg tacgcgcgaa gtcgccgacc acgccatcgc gctgatgatg actttggcca
     4201 agggcacagc ctatcacgat caggaattgc gtgccgacct gcgctccaat tggcggcccg
     4261 cgcataatcc atttggtcgc cggctatccg tatgcacctt tggcgtcgtt ggcatgggcc
     4321 gcattggcac agccgcggcc cgccgggcca aggccttcga tatggatgtc gtgttctacg
     4381 acccgtacca gccgaacggc tatcagtttg ccatcggcgt gcgccgcgcc gactcgttgg
     4441 ccgagttgat gggccaatgc gacttcgtca gcgtccatgc tccgctgacg acggaaacgc
     4501 gcggcctgat cggagccaac gccttcgccg cggcgaaaaa gggtatgata ctgatcaata
     4561 ccgcgcgcgg cccggtcgtg gacatcgatg ctttgtacga cgcgatgaaa gatcgtaccg
     4621 tgctggcagc cggtctcgac gtgctgccgg aggagccagc caatccccaa cggcggctga
     4681 tcgatgcatg gcagaagaac gaggactgga tccgccatcg cctggtggtg acaccgcatt
     4741 cggccttcta cacgccggag agcatgcgcg ataatcgcgc cttcgcctcg cgcaccgcag
     4801 cccgtttttt acgcgaggga cggctcgaaa attgcgttaa caaacagttc ctggtggcga
     4861 agggctgacg ctggttcttt gtggcctcgg ccgttggcgg cgttgaacgt tcaaccgtgg
     4921 ctggaggcga ccctgtcgtt gtgtgagggc ggctatcttt taaaggcgat ttatgcttga
     4981 cccattgaag attctcgcgg cgaacctgat ccttcctaaa cgcgtgagcc acctttgaag
     5041 tggtaatcgg tacggattct gcacggtatt ctgccgtttg ggaatcgggg tggattgaat
     5101 aatatcgcag cgacactcga gcatggatgg agcgaatgag ccaatcgaaa ccgcgcccca
     5161 ggcgtaagtc aaaatcaacc agccctgcga agaccataaa cctcagcgag caggaaatgc
     5221 gggatgccgc ttactacctg tgggtacagg aaggacggcc ggagggccgg gcgctggatc
     5281 attggttgca ggcctctggg caacgcggcg acaatatgag cgttcgttga acgcgttggc
     5341 tggcagccgt tgtaattctt tcaacaccat ttcggattcc gccgcttcac aataccgggt
     5401 gtactgaccg gacgcgttcc gaatcccgtc tcgccgacac caggcgttac cgaggtccgg
     5461 acatgactgc agttaacgtc gccgcgaacg tcgtgggcgt tcttgtgacc aagccgcgta
     5521 ctcgtgcgct cccggacatc gacgccgagt aaggaacgct tccgtcctca acgacattca
     5581 tggcgtagtg atgaaaacct gcctgccagg gtcggttttg ggcgacgcgc gcacgacccg
     5641 gaacgccgga tactgccgca ggtcatgcct gacgacaaaa ttaagctcgt aggctgaact
     5701 ggcgtcatac tccttgactg cccgctcacc ggcaccgctc tcgatttcga ccacgtactc
     5761 catggcagct tcctccgaat tttggcggct atgtgccgga cggcaattcg gcggtcaatg
     5821 ctatttttaa gggcagcccc gtgtgcagtg cagcacgaaa attaggcatc ggtaaaattg
     5881 cgtccgtgga accggcttgt ggcggacggg cgcggagctt gtggataggt gctttgcgcc
     5941 acggaggaga cacgcacgca ccccgtcaag aaaccgccga gggtcctttt cccgagcgtt
     6001 atggcggctc atttgccaca gggtgggcgc gcacggaatt gtcttttatc gaccttggcc
     6061 cggcggtgcg aagggacgcc ggcatctttc ggcaacccat tgttcacgtc cgagaacgca
     6121 tcggggcgat ggtcagcggc tgagcgaccc gtatttgcgt catccaggtc tccttgaaat
     6181 tggcaacgag gtcggcctcg tgtggacccg ctgcggacaa tgtttggccc agccggacca
     6241 aattgccgac ctgcacgcac cggccggcaa ctgttcgcga cgatggcgtc gatcctggtc
     6301 taggacagac taagtccagc ctggcagagc gctgcctacg ccttagcgac aaagtatctc
     6361 gatagaaatt aagcattcat tcagacaatg tattttgtcg gaattcttta cagttcaaaa
     6421 tagtcatttc gttttcgttc gtctattctc ctgagattgc ttagctatac cggttggccc
     6481 acgtattgcg ttgccgtgtc ggtggcgcga gcgaatttga gacagataag actcgccgga
     6541 taagagaaag cgaaattgtt gtatatcggg agtctcagtc catgcccaca tcatcagcca
     6601 aaacattaac ctcggttgga cattcgaaat acacatccga ctatgcgttc ggctctgacg
     6661 gcaatatttc gaataatggt ttgaccctga ttaatcgtgg cctgatcggc ggggctgcgg
     6721 tgcaaagtgg tgtacttaat ctttcgtacc gagctgccaa tcgtcagcaa atgcccgtgc
     6781 ggaggaatgc gaaccagtat cccgacgctg ggttcggttt ttgatccggc tttggaaata
     6841 ttctgattaa ccaatgaa
//
LOCUS       DATAVD010000652         1856 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2106864, whole genome shotgun sequence.
ACCESSION   DATAVD010000652 DATAVD010000000
VERSION     DATAVD010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1856
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2106864"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            304..1185
                     /locus_tag="VHX39_12215"
     CDS             304..1185
                     /locus_tag="VHX39_12215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991926.1"
                     /translation="MARKPRSTRAATGANQVGSIPAGAPSDLPLSDEEFIAQSQRQDR
                     QHQVAQEQQQARLAARVRFEQLRDDLKWYGERQDQESGTPQGLIDLIADLLSAAKEAS
                     ILVPRDHSDQANDPARQWAVRIFRHIAAGRKAAALKLLQHAGPSASWPWTRDWIKRRL
                     IDEAIHPSPSFPANQESSTAPDASALAAPTVPAASAPAATAIPASASGDEAAAEANPV
                     HWLTLVEAEQLSAINRGVISRAVTAGEIASNGKKGRQRRLDAADFVRWQLARARRPEA
                     PEGNEQVREQFRQLGSR"
     gene            1465..>1856
                     /locus_tag="VHX39_12220"
     CDS             1465..>1856
                     /locus_tag="VHX39_12220"
                     /inference="COORDINATES: protein motif:HMM:NF014273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HEX3991927.1"
                     /translation="MQIEMWDITAVTPYERNPRINDQAVDAVARSIQEFGWRQPLVVD
                     EQGVLIVGHTRLKAAWKLGLRQVPVHVAVGLTPAQVRAYRLADNRTADLSDWDQDRLV
                     QEVIDLQKEDYDVSLVGFSADELLDLLHA"
BASE COUNT          352 a          604 c          561 g          339 t
ORIGIN      
        1 aagcggccaa aaacaccccg gacaaatcgg accggaatag gaacgactgc ggacaaatca
       61 ggacaatgct cggccactgc cggcgcaact atccatttca tccttacttc cgacacgaag
      121 ttctggctcc tcttgcgggt cgccaaacgc caccgcatcg cctcaacatg tccgggtgaa
      181 acgccaatgg cctttcgttc ctgctccccg ccaagcaact ggctgccatt cggttcggcg
      241 atttgctacg gtacgatgaa ctacatcagc cgttttcttc cccgcgcttc cggaacacag
      301 ggcatggctc gaaaaccccg ctcgactcgc gctgcgactg gtgccaacca ggtcggctcc
      361 attcccgccg gggcgccatc ggaccttcct ctctccgacg aggaatttat cgcccagagc
      421 caacggcagg atcgccagca tcaagttgcg caggagcaac aacaagcacg gcttgccgcg
      481 cgggtgcggt tcgagcaatt gcgcgacgat ctgaagtggt acggggaacg ccaagaccag
      541 gaatcgggca cgccgcaggg gttgattgac ttgattgccg acctcctgtc cgctgccaaa
      601 gaggccagta tcttggtacc gcgggaccac tccgatcagg cgaacgaccc cgcgcgccaa
      661 tgggcggtgc gcattttccg gcatattgct gcgggccgga aagccgccgc gctgaaactg
      721 ctgcaacatg ctggcccgag cgcatcctgg ccgtggaccc gtgattggat caagcgacgg
      781 ttgatcgacg aagcgatcca cccatcgccg agttttccgg cgaaccagga aagttccacg
      841 gcccctgatg cgtccgcact ggccgctccc acggtccccg ctgcctccgc accggccgct
      901 accgcaatcc ccgcctcggc atcaggcgat gaggcggcgg cggaagcgaa tcccgtccat
      961 tggttgacgc tggtcgaggc cgagcaattg tctgccatta atcgaggggt cataagccgt
     1021 gcggtcaccg ccggcgagat tgccagcaat ggcaagaagg gccgacagcg gcgtttggac
     1081 gcggcggact ttgttcgttg gcagttggct cgcgcccgtc ggccggaggc acccgaaggc
     1141 aacgaacaag tccgagaaca gtttcgtcag ctgggctccc gctgagcgca acgatccctc
     1201 cgaagttgcg ccttggttgc gcaaagtttt ttctccgtcc ccaccgatgt aaacccgctg
     1261 catggtcgct cgctctcggg ctcatttttc gttgcgccgt cgttgcgcgc tggcgcgatt
     1321 cgttctactg ggagcgtccg tcgggcatga gccgaggaag acggacaggc gttcctggcg
     1381 aagagccgag gccggcaggt cgccttttcc agtccacagc ccggcgtttc tccccgaagt
     1441 ggaagcctgc ccaggaggca gaccatgcag attgaaatgt gggacatcac cgccgtcacg
     1501 ccctacgaac gcaatccgcg catcaacgac caggccgtcg atgccgtggc gcgctccatt
     1561 caggaattcg gctggcggca accgctggtg gtcgatgagc agggcgtcct gattgtcggc
     1621 catactcgcc tcaaggccgc ttggaagctg ggcctgaggc aagtgcccgt gcatgtcgcg
     1681 gtcggcttga cgcccgctca agtccgcgcc taccgcctgg cggataaccg cacggccgac
     1741 ttgtccgact gggaccagga ccggctggtt caggaggtga tcgacttgca gaaggaagac
     1801 tacgacgtca gcctcgtagg gttttccgcc gacgagctgc tcgatttgct gcatgc
//
LOCUS       DATAVD010000653         2047 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1362527, whole genome shotgun sequence.
ACCESSION   DATAVD010000653 DATAVD010000000
VERSION     DATAVD010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2047
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1362527"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="VHX39_12225"
     CDS             complement(<1..332)
                     /locus_tag="VHX39_12225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX3991928.1"
                     /translation="MPDTAIVPAVTAQLLDAIRAVVGDRGLLTDRSDTEAASEDWRRL
                     YKGQTRAVVRPANTEEVAAVVRLCVEAGVPIVTQGGNTSMVGGAVPAEDGSELVLSTA
                     RLNRVRDL"
     gene            complement(464..1009)
                     /locus_tag="VHX39_12230"
     CDS             complement(464..1009)
                     /locus_tag="VHX39_12230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991929.1"
                     /translation="MTLRSWYACGNALCEAAMIHHLSIAARNPKQSAEVLAELMGGTA
                     IPFPPNPGSYFALQLDEHGSGVEVYPAGTVLQPGGATGGNFVHQDPRGFGSTHFALSV
                     KTDPTTVQAIAERAGWKCFDCNRGPFHVIEVWVENETMVEVLPPAYAQEYLNFAQPGK
                     MQAAMAAAAASGARHPKAAAE"
     gene            1116..>2047
                     /locus_tag="VHX39_12235"
     CDS             1116..>2047
                     /locus_tag="VHX39_12235"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3991930.1"
                     /translation="MDGSVKPGTSGKGLAKSPGALAGLKVVDLTRVLGGPYCTMILSD
                     HGADVIKVEPPQGDEVRDWGPPFHEGDASYFIGVNRNKRAMAVDLRKPDGQEIILKLL
                     ADADVLIENFKPGDMERWGLGYQDVLSKRFPRLIHCRISGFGGDGPLGGLPGYDAILQ
                     AMTGLMSVNGDAFTGPLRLGTAIVDMGTGLYSAIGILMALHERTISDQGQYLDMTLYD
                     CGMALLHPQAANYFLNDKRPAGTGNPHPNLVPYDKYPTRTCDIFIASGNNGQFRKLCE
                     LVGRPALADDPRFANNGERNINRVALTELLRAAFA"
BASE COUNT          388 a          661 c          629 g          369 t
ORIGIN      
        1 tcgagatcgc gcacccggtt cagccgcgcc gtactcagca ccagttccga gccgtcctca
       61 gccggtaccg ctcccccgac catcgaggta ttaccgccct gagtaacaat cggcaccccg
      121 gcctcgacgc acaggcgcac gaccgcagca acttcttcgg tattggcggg ccgcacgacg
      181 gcgcgggtct ggcccttata cagccgccgc cagtcctccg aggcagcctc agtgtccgac
      241 ctgtcggtca gcagaccacg atcgccaacc accgcgcgga tcgcgtccag caattgtgcg
      301 gtcacggcag ggacaatcgc ggtatcaggc atgatgggtc ctaccagccg acgtgttcgg
      361 ccagcttagc ccggaatgcg cccggcggaa cacgcccgcc cgcacacctg ggcgtgcgca
      421 atgcacacct accgaatatg cgcccgagcg gtgtccttgc agcctattct gcggccgcct
      481 tcggatgccg tgctccggac gctgccgctg ccgccatcgc cgcctgcatc ttacctggtt
      541 gggcgaaatt cagatattcc tgcgcatagg cgggcggcag aacctcgacc atcgtttcgt
      601 tctcgaccca gacctcgatg acatggaacg gcccgcggtt gcagtcgaag cacttccatc
      661 cggcccgctc ggcgatcgcc tgcacggtgg tgggatcggt tttcacgctc agggcgaagt
      721 gcgtcgagcc aaaaccgcgc gggtcctggt ggacaaagtt gccgcctgtc gcgccgccgg
      781 gctgtagcac ggttcccgcc ggatagacct ccacccccga gccatgctcg tcgagttgca
      841 gcgcaaagta gcttcccgga ttgggcggga acggaattgc ggttccaccc ataagttcgg
      901 cgagcacttc tgccgactgc ttcgggttac gtgcggcgat cgaaagatga tggatcatgg
      961 ctgcctcaca caatgcattg ccgcaggcat accacgaacg cagcgtcatc agcaatcagc
     1021 cgggaacgac ggaagcgggg aagcaaccgc ggaggctctg gtcaaagccc gcacccgagc
     1081 gctacaccgg atttgtttca aggaggaacc gtcgcatgga tggatcggtc aaacccggca
     1141 ccagtggaaa ggggctggcc aaatcgccag gcgcattggc tggattgaag gtcgtcgacc
     1201 tgacccgtgt gcttggcggc ccatattgca caatgatcct gtccgatcat ggcgccgacg
     1261 tgatcaaggt cgagccgccg cagggcgacg aagtgcgcga ttggggccct ccgttccacg
     1321 aaggcgacgc cagctatttc atcggggtca accgcaacaa gcgcgcgatg gcggtcgacc
     1381 tgcgcaagcc ggacggccag gagattatac tgaaactgct ggccgacgcc gatgtgctga
     1441 tcgagaactt caagcctggt gacatggagc gttggggtct tggctaccag gacgtgctgt
     1501 caaagcggtt tccccggctg atccattgcc gcatttccgg ttttggcggc gacgggccgt
     1561 tgggcgggct gccaggctat gacgcgattc tgcaggcgat gactggcctg atgagcgtca
     1621 acggcgatgc cttcaccggt ccgctgcggc ttggcacggc gatcgtcgac atggggaccg
     1681 ggctttattc cgcgatcggc atcctgatgg cgttgcatga gcgaaccatt tccgaccaag
     1741 gccaatatct cgacatgacg ctgtacgatt gcggcatggc gctgttgcat ccgcaggcgg
     1801 cgaattactt cctgaatgac aaacggccgg ccggcaccgg caatccgcat ccgaatctcg
     1861 taccatacga caaatatccg acccgcacct gcgacatttt cattgccagc ggcaataacg
     1921 ggcagtttcg caagttgtgc gagctggtcg gacgaccggc gctggccgat gacccgcgct
     1981 ttgccaacaa cggggagcgc aacatcaacc gggtcgcgct gaccgaattg ctgcgcgccg
     2041 ctttcgc
//
LOCUS       DATAVD010000654         5237 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1736271, whole genome shotgun sequence.
ACCESSION   DATAVD010000654 DATAVD010000000
VERSION     DATAVD010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5237
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1736271"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1221)
                     /locus_tag="VHX39_12240"
     CDS             complement(<1..1221)
                     /locus_tag="VHX39_12240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015074504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEX3991931.1"
                     /translation="MTNPNIVFIMADDLGFADLSCNGSRHCATPNIDRIAERGVRLRQ
                     TYANSAVCSATRLALITGRYQYRLPLGLEEPLAGKTDVGLPPEHPTLPSLLRAAGYGT
                     TLIGKWHLGVLPKFGPERSGYDHFWGIRSGAIDYYSHINPRGEDDLWDGETTIHQAGY
                     LTDLLGDKAVGAIEGYARQRQPFLLSLHFNAPHWPWEAPGDEAVSERLTGTRLRHFDG
                     GTLRTYARMVQAMDLQIGRVLQALDANRLTDNTIVIFTSDNGGERFSDTWPFTGIKTE
                     LLEGGLRVPGLICWPSRIPAGAVSDQVAITMDWFATLLEAAEVAPDPDHPPDGISLLP
                     VLTSPVPRQLFWRYRLNRQRAMRDGPFKYLKIRDNTYLFNVVEDPRERGNLRELRKDV
                     FERMEAEWHAWNATM"
     gene            complement(1218..2093)
                     /locus_tag="VHX39_12245"
     CDS             complement(1218..2093)
                     /locus_tag="VHX39_12245"
                     /inference="COORDINATES: protein motif:HMM:NF018400.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1186 domain-containing protein"
                     /protein_id="HEX3991932.1"
                     /translation="MSATLLTVDDAVQAFAAASDGPPVAALQWALDHWEQAAPRFLQL
                     LDAYADGSDDSDDTTDALFFIIHLFGDKGDIRAFRNLCRLMLDEDRLVAALGDDACVE
                     TLKGVLIKCFDGDAAPLQQVIESAEAESITRGEALLALAWVARDGRWPEPAFSEYLRH
                     LLATMQPREEDYVWYMWVVVAAILGYEELADASKQLIEDGLVPEEWLTLAELPELIAT
                     GDAVGKAGLIAEEVVPFDDVIGSLENWSWPGDDAEWDEPAPEPYINPLRHIGRNDPCP
                     CGSGKKFKNCHLVAE"
     gene            complement(2093..2959)
                     /locus_tag="VHX39_12250"
     CDS             complement(2093..2959)
                     /locus_tag="VHX39_12250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3991933.1"
                     /translation="MFFDGFTLSYVPVPGGAIRLRHGGSGPPLLMLHGAPQTHAMWHL
                     VAPDLAQRFTVICPDLRGYGFSLKPPATADHAPYSKREMARDMIAVMDHFGFQRFRLA
                     GHDRGARLSHRIAIDYPDRVERLAILDIIPTLEHFERVNMDFALGYYHWFWFAQPHPN
                     PEWLIDKAPDEWLLRQTGGDRLFHPDALADYLAAVRQPAMVRGMCEDYRAAAGIDLVH
                     DRESRARGDKVQCPMLALWGSKGRIAQWYDALAIWRSYCANDVSGGPIASGHYIAEEA
                     PGELLTAFRGFF"
     gene            complement(2964..4418)
                     /locus_tag="VHX39_12255"
     CDS             complement(2964..4418)
                     /locus_tag="VHX39_12255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991934.1"
                     /translation="MLCLAAWLRGAEYDEQYTLFLTSGVPRPDWPATVFAAGLARNIQ
                     AGHSGLAAIAHDLRVTDVHPPLYFGLVALWRDAVGQGLFVARLLSVLLGLGALALTGT
                     IAQAARVPPALAMLLTLGCYGFTYTSVVARGFALALLLLLGGVTGLLRGRRLWHFVLA
                     GALLGAATLTNYLAVFAAMACVLATWLEVVWPERPGPSSGSRMLGQAVAVLLGFLVFI
                     PADLWWFLAQRDTRQGQFPPFALTQSLARLAVRFTGDVLGGLPLYVPGRASMALTAAL
                     GLLLVWLTARIVLRWRHIGARRATVLFGLAALAPPVGLLILGAIFNNTPIEVRYLTFS
                     TPFVGLLLAGALSTRAAGGVLIVQGAAIAGLMLAPQTMQPARAAARTAASWVQDGVVL
                     LPRGNDGVGVVGAFAIEAPPGLALLLIPAGASPEQIRARIRPMHRVVLALLEQDAASR
                     AASAAMRQALTDPGWREVAHEANVALYVRIGEGD"
     gene            4539..>5237
                     /locus_tag="VHX39_12260"
     CDS             4539..>5237
                     /locus_tag="VHX39_12260"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3991935.1"
                     /translation="MPDVLAPHFQGEFRPTLSVVVPAFNEAEGISEFHLRLVAAMDPL
                     GPWEAIYVDDGSNDATREMVELLRLDDPRIALISLSRNFGKEIATTAGLDHARGEAVI
                     VIDADLQDPPEVIPDLVATWRQGFDTVCARRRMRQGETAVKKLTAHAFYRLMRHTGRV
                     KLPQDTGDFRLMSRRVVQAVCQLREQHRFMKGLFAWVGFPSTTVLYDRAPRHTGRGKW
                     TYWKLWNLALEGITS"
BASE COUNT         1066 a         1753 c         1565 g          853 t
ORIGIN      
        1 catcgtggca ttccaggcgt gccactcggc ctccatccgc tcaaacacat ccttacgcag
       61 ctcccgcaga ttgcctcgct cgcgcggatc ctccaccacg ttgaacaggt atgtgttgtc
      121 ccggatcttc agatatttga acggaccatc gcgcatggcg cgttgccggt tcagccgata
      181 tcgccagaac agttgcctcg gcacaggact cgtcaacacg ggcagcaggc tgatcccgtc
      241 cggcggatga tccgggtctg gcgccacctc ggccgcctcc agcaaagtgg caaaccagtc
      301 catggtgatt gcgacctggt cgctgactgc accggccgga atacgcgaag gccagcaaat
      361 aagcccagga acgcggaggc caccttcgag aagctcggtc ttgatgcctg tgaacggcca
      421 ggtgtcggaa aaccgctcac ctccgttatc gctggtaaaa atgacgatcg tgttgtccgt
      481 caggcggttg gcatcgagtg cctgcaaaac ccgcccaatc tgcaaatcca tcgcctgcac
      541 catcctggca taggtccgca acgtgccgcc atcgaagtgg cgcagccgag tgccggtcaa
      601 ccgctcggac acggcctcat cgcccggcgc ctcccacggc cagtgcggcg cattgaagtg
      661 caggctcagc aggaacggct gccgctgcct ggcatatccc tcgatcgcac cgactgcctt
      721 atcgcccaac agatcggtca gatagccggc ctgatggatg gtggtttcgc catcccacag
      781 atcatcctcg ccgcgtggat tgatatgcga gtaatagtcg atcgctccgc tgcgaatgcc
      841 ccagaaatga tcgtagccgc tccgctccgg gccgaacttc ggcagcacgc ccagatgcca
      901 cttgccgatt aatgtcgtgc cgtaccccgc agcgcgcagc aacgacggca atgtcggatg
      961 ctcgggcggc aggccgacat cggtcttgcc ggccagcggc tcttccagac ccagcggcag
     1021 ccggtactgg tagcggccgg tgatcagcgc cagccgggtg gcggaacaga ctgccgaatt
     1081 ggcataggtc tggcgcagcc ggacacctcg ttccgcaatg cgatcgatgt tgggcgtggc
     1141 acaatgccgg ctgccgttgc acgacaaatc ggcaaagccc aggtcgtcgg ccatgatgaa
     1201 cacgatattg ggattggtca ttccgccacc agatgacagt ttttgaactt cttgccgctg
     1261 ccgcacgggc acggatcgtt gcggccaatg tggcgcagcg ggttgatata aggttctggc
     1321 gccggttcat cccattcggc atcgtcgcct ggccacgacc agttctccag cgaaccgatc
     1381 acgtcgtcga acggtacgac ctcttcagcg atcaggccgg ccttgccgac tgcgtcgccg
     1441 gtggcgatca gttccggcaa ctccgccaga gtgagccatt cttcggggac caggccgtct
     1501 tcgatcagtt gtttcgaggc gtcggccagc tcctcataac caaggatcgc ggcgaccacg
     1561 acccacatgt accagacata atcctcctcg cgcggctgca tcgtcgccaa caaatggcgc
     1621 agatattcgg aaaatgccgg ttccggccag cgcccgtcgc gcgcgaccca ggccagtgca
     1681 agcagcgcct cgccgcgggt gatcgattcc gcttcggcgg actcgatgac ctgttgcaac
     1741 ggtgcggcgt cgccgtcgaa gcatttgatc agcacgccct tcaatgtctc gacgcaggca
     1801 tcatcgccaa gtgctgcaac cagccggtcc tcgtcgagca tcagccggca cagattccga
     1861 aaagccctga tgtcgccttt gtcgccgaac aaatggataa tgaagaacag cgcatccgtt
     1921 gtgtcgtcgg aatcatccga gccatcggca taggcatcca acagttgcag gaatcgcggc
     1981 gcagcctgtt cccagtgatc cagcgcccat tgcagcgccg caaccggcgg accgtcggat
     2041 gccgcagcga aagcctggac cgcgtcgtcg accgtgagca aagttgctga catcagaaaa
     2101 atccacggaa tgcggttaac agctcgcccg gcgcttcctc ggcgatatag tggcccgacg
     2161 cgattggtcc gcccgagacg tcattcgcgc aatagctccg ccagatcgcc agtgcgtcgt
     2221 accattgcgc aattctaccc ttcgagcccc acagcgccag catggggcat tgcactttgt
     2281 cccccctcgc ccggctttcc cgatcatgca cgaggtcgat gccggcggcg gcacggtaat
     2341 cctcgcacat accgcgcacc atcgccggct ggcgcaccgc ggcgaggtaa tcggccagcg
     2401 catcgggatg gaacaatcga tcgcccccgg tttgccgcag caaccattcg tcgggcgctt
     2461 tgtcgatcag ccattccggg ttcggatgcg gctgcgcgaa ccagaaccag tgataatagc
     2521 ccagcgcgaa atccatgttc acgcgttcga aatgctccag ggtggggatg atgtcgagga
     2581 tcgccaaccg ctccacccgg tcgggataat cgatcgcgat ccggtgcgac agccgcgcgc
     2641 cgcggtcatg tccggccaga cgaaaccgct ggaagccgaa atgatccatc accgcaatca
     2701 tatccctggc catctcgcgc ttggaatatg gcgcgtgatc cgcggtcgcc ggcggcttca
     2761 gggagaaccc gtagccgcgc agatcggggc agatcacggt aaagcgctgc gccaggtccg
     2821 gcgccaccag gtgccacatc gcatgggtct gcggcgcgcc atgcagcatc agcaacggcg
     2881 gaccggagcc gccgtgccgc aaccggatcg ccccgcctgg caccggaaca tacgagaggg
     2941 tgaacccatc gaagaacatc ccgtcagtct ccttcgccga tccggacata tagcgcgacg
     3001 ttggcctcgt gcgcgacctc ccgccagccg gggtcggtca aagcctgccg cattgccgca
     3061 ctggcggcgc gactggcagc atcctgctcc agcagcgcga gcacaacacg gtgcatgggc
     3121 cggatgcggg cgcgaatttg ctcgggcgag gcacctgccg ggatcagcag taacgccaat
     3181 cctggaggtg cctcgatcgc aaacgccccc acgaccccca cgccatcgtt gccccttggc
     3241 aacaacacca cgccgtcctg cacccaggaa gcggcggtgc gggccgcagc acgggccggc
     3301 tgcatcgttt gcggcgcgag catcaggccc gcaatcgcag ccccctgcac gatcagcacc
     3361 ccgcccgcag cacgggtgct caacgcaccg gccagcagca agccgacgaa cggggtcgaa
     3421 aaggtcagat agcgcacctc tatcggcgta ttattgaaga tcgcgcccag gatgagcagc
     3481 ccgaccggcg gcgcgagcgc ggcgagtccg aacaagaccg tcgcacgccg ggcgccgata
     3541 tggcgccaac gcaagacgat gcgagccgtc agccagacca gcaacaagcc aagcgccgca
     3601 gtcagcgcca tcgatgcccg gccaggcacg taaagcggca atccgccaag tacgtcaccg
     3661 gtaaaccgga ctgccagacg ggcgaggctc tgggtcaggg caaatggcgg aaactggcct
     3721 tgcctggtgt ctcgctgcgc caggaaccac caaagatcgg ccggaatgaa gaccagaaac
     3781 ccaagcagca ccgcaacggc ctggcccaac attctgctgc ctgacgacgg gccaggacgc
     3841 tccggccaaa ccacctccaa ccaggttgcc agcacgcacg ccatagcggc gaagacggca
     3901 aggtaattgg tcaatgtggc ggcgccgagc aaagccccgg ccagcacgaa atgccacagc
     3961 cgccggccgc gcaacaatcc tgtgacaccg cccagaagca acagcaacgc cagtgcaaag
     4021 ccacgtgcga cgacgctggt ataagtaaac ccgtagcatc ccaacgtgag caacatggcg
     4081 agcgccggcg gcacgcgcgc tgcctgagcg atcgttccgg tcaatgccag agcccccagt
     4141 ccaagcagca ccgaaagcag ccgcgccacg aacagcccct gccccaccgc gtcgcgccac
     4201 agtgccacca gcccgaaata caatggcgga tgcacgtcag tgacccgcag gtcatgcgct
     4261 atggcagcca gccccgagtg gccggcctga atgttgcgcg ccagaccggc cgcgaacacg
     4321 gtcgccggcc aatccggccg cggcacgccc gaggtcagaa acagcgtgta ttgctcatcg
     4381 tattcggcgc cccgcagcca ggcggcgagg cacagcacaa ccgcacacgg cagcaatgtc
     4441 caaaggaatt ggtgactttt cgatggtccg ttaatcaaag attcgtacct tggtggcaga
     4501 acaccggtac tatcggtcaa atgttaacgg accttgccat gcccgacgtc ctggcgccgc
     4561 attttcaagg cgagtttcgc ccgaccctgt ccgtcgtggt gcccgcgttc aatgaggctg
     4621 agggcatctc ggaatttcat ctgcgcctcg tcgcagcgat ggatccgctt ggcccgtggg
     4681 aagcaattta cgtcgatgac ggcagcaacg atgcgacgcg ggagatggtg gaattgctcc
     4741 ggctcgatga tccgcgcatc gcgttgatca gcctctcgcg caacttcggc aaggagatcg
     4801 ccaccaccgc tggacttgac cacgcgcgtg gcgaggctgt gatcgtgatc gatgccgacc
     4861 tgcaggaccc gccggaggtc attccggacc tggtcgcgac gtggcggcaa gggttcgaca
     4921 cggtttgtgc acgccggcgt atgcgacagg gcgaaaccgc cgtcaaaaag ctcaccgcac
     4981 atgcgttcta ccgcctgatg cgccacaccg gccgggtcaa actaccgcag gataccggcg
     5041 atttccgcct catgagccgg cgggtggtgc aggcggtgtg ccagctgcgc gaacagcatc
     5101 gtttcatgaa aggactgttc gcctgggttg gatttcccag cacgacggtg ctttacgatc
     5161 gggcgccccg gcacaccggc cgcggtaaat ggacttactg gaaattgtgg aacctggccc
     5221 tggaggggat caccagc
//
LOCUS       DATAVD010000655         1665 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2852251, whole genome shotgun sequence.
ACCESSION   DATAVD010000655 DATAVD010000000
VERSION     DATAVD010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2852251"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..760)
                     /locus_tag="VHX39_12265"
     CDS             complement(<1..760)
                     /locus_tag="VHX39_12265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010509493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3991936.1"
                     /translation="MTDSVPKLRLRGIRKRFGDKVVLDGVDLDVMPRTSLVVIGGSGS
                     GKSVLLKCILGLIEPDAGSIEIDGRDLMTMPRAEREAARAQIGMLFQNGALFDSLPVW
                     ENVAFGLLARHKVSRLEAPKRATEFLAQLGLAESVGFLSPAELSGGMQKRVALARAIA
                     AQPDILFFDEPTTGLDPIMGAIIDGLIVDCVKRLGSTAIAITHDMASAKRIGDQVAML
                     HRGRIIWTGPPTALMDSGDPVVDQFTHGRREGPIE"
     gene            855..1265
                     /locus_tag="VHX39_12270"
     CDS             855..1265
                     /locus_tag="VHX39_12270"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3991937.1"
                     /translation="MNDNVTQMQSLAHATPETAKSVAGRRSFFTYLDLGVTDASNGAM
                     RAQVTKATQGLGKPTGWHYHVCDQQFVYMLKGWVDLEFEDGRKIRLHAGDSLMIPGGT
                     RHNETATADELELLEISVPAKMDTVSCDPPAGRS"
     gene            complement(1266..>1665)
                     /locus_tag="VHX39_12275"
     CDS             complement(1266..>1665)
                     /locus_tag="VHX39_12275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003629138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3991938.1"
                     /translation="DALTTLSTNPLKYLVAPRLLAGTIALPLLVVVADILGVLGGFIV
                     SVLKLGFNQNVYLTNTMNFVQSDDVISGLAKAGVFGFIIALMGCYQGYNSRGGAQGVG
                     AATTAAVVSASILILASDYVLTEMFFTRAS"
BASE COUNT          343 a          537 c          499 g          286 t
ORIGIN      
        1 tttcgatcgg cccctcgcgc ctgccgtggg tgaactgatc gacgaccgga tcgccactgt
       61 ccatcaacgc cgtcggtggc ccggtccaga tgatgcgacc ccggtgcagc atcgccacct
      121 ggtcgccaat tcgtttcgca ctcgccatgt catgagtgat cgcgatcgcg gtcgaaccca
      181 gccgtttcac gcaatcgacg atcagcccat cgatgatcgc acccatgatc ggatcgaggc
      241 cggtggtcgg ttcatcgaaa aacaagatat ccggttgcgc ggcaatggcc cgcgccagag
      301 ccacgcgctt ctgcatcccg cccgacaact ccgccggcga caaaaacccc acactttcgg
      361 ccagccccaa ctgggccagg aattccgtgg ctcgcttcgg agcttccagg cggctgacct
      421 tgtggcgggc gagcaacccg aacgccacgt tttcccagac cggcaaactg tcgaacagcg
      481 cgccgttctg gaacaacatg ccgatctgcg cccgtgcggc ctcgcgttcg gcgcgcggca
      541 tggtcatcag gtcgcggccg tcgatctcga tcgagccggc gtcgggctcg atcaggccaa
      601 ggatgcattt cagcagcacc gacttgccgg accccgagcc gccgatgacc accaaagacg
      661 tgcgaggcat gacgtccagg tcaacgccgt ccagcacgac cttgtcgcca aatcttttcc
      721 ggattccgcg caggcgaagt ttgggtactg agtcggtcat gccttgttag atgccagcag
      781 gctgcaggac cggcaatggt ttacctgtcg cccgaacagt gatctgatcc gccgatgcag
      841 aagaggaccg tcccatgaac gacaatgtca cgcaaatgca gagcctcgcc catgccacgc
      901 cggagactgc gaaatcggtc gcgggccgcc gttcgttttt cacctacctc gatcttggcg
      961 tcaccgatgc ctcgaacggt gcgatgcgag cccaggtaac gaaggccacg caggggttgg
     1021 ggaagccgac gggctggcac tatcacgtgt gcgatcagca gttcgtctac atgctgaaag
     1081 gctgggttga tctggaattc gaggatggcc gcaagatccg cctccacgcc ggggattcgc
     1141 tgatgatccc gggcggcacg cggcacaatg agaccgccac ggccgacgaa ctggaactgc
     1201 tggaaatctc ggtgccggcg aagatggaca ccgtgtcctg cgatccgccg gccggcagaa
     1261 gctgatcacg acgcccgggt gaagaacatc tcggtcagca cgtagtccga cgcgaggatc
     1321 aggatggagg cgctgaccac tgcggcagtg gtggcagcgc caaccccctg cgcgccgcct
     1381 cggctgttat agccctggta gcagcccatc agcgcgatga taaacccaaa cacgccggcc
     1441 ttcgccaggc cggagatcac gtcatccgac tgcacgaaat tcatcgtgtt ggtcaggtaa
     1501 acgttctggt taaagcccag tttcagcact gaaacgatga agccgccgag tacgccgaga
     1561 atgtcggcga cgaccacgag cagcggcagg gcaatagtgc ctgccagcag ccgcggcgca
     1621 accagatatt tcagcggatt ggtcgacaaa gtcgtcaacg catcg
//
LOCUS       DATAVD010000656         2698 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3598716, whole genome shotgun sequence.
ACCESSION   DATAVD010000656 DATAVD010000000
VERSION     DATAVD010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2698
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3598716"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(132..1019)
                     /locus_tag="VHX39_12280"
     CDS             complement(132..1019)
                     /locus_tag="VHX39_12280"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX3991939.1"
                     /translation="MTRHGSGSVGVRADRVFICTTKWIGIVALLLLTAVACDPPSPHT
                     PIMQPITISGPDAVQIPPIAVPGARMPIAPIPAELKLPVGNGPFPVVIVLHGCAGLGA
                     SQWIWARRLNGWGYAALIPDSMTPRGVKRVCEPAAQNLVTWWDRVGDVGSAAAWLRTQ
                     SQIDPHRIAVLGLSHGGATAAIATQRAYAGFGLRAAVDYYGPCVDPATHGDVPLLVLV
                     GGDDDWGHPAKRCQDFGAALQAGQDFELHVYPGAYHAFDNPNMVRTVSNSHVLEYNKP
                     AAEDSYAQVHGFLDRWVLR"
     gene            complement(1016..1792)
                     /locus_tag="VHX39_12285"
     CDS             complement(1016..1792)
                     /locus_tag="VHX39_12285"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEX3991940.1"
                     /translation="MKPGAPLIVLLCLTSTLAFHPAVAEQLNYALDVVGFPVADASLN
                     IDRTDSKYRASFDFHTRGLANIVDGGRLDETVSGGLKSDRATPQVFASSGYLHGQNRI
                     VDMTWQDGTPEVTQISPPNATERTDVPVALRAGAVDQVSLIVFLLRKVEETGRCDASA
                     HSFDGRDLELFQVRTEGEEDIRATGQSSFSGRALRCAFTSQTLAGFRFGSAGDQDRRL
                     HRGTIWLARVGSGGTRLPVRASVETRWFGDATLYLQSVLP"
     gene            2000..2074
                     /locus_tag="VHX39_12290"
     tRNA            2000..2074
                     /locus_tag="VHX39_12290"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2032..2034,aa:Val,seq:cac)
     gene            complement(2122..>2698)
                     /locus_tag="VHX39_12295"
     CDS             complement(2122..>2698)
                     /locus_tag="VHX39_12295"
                     /inference="COORDINATES: protein motif:HMM:NF025605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX3991941.1"
                     /translation="IDAARRLFASQPFDLVTMETVAKLARVSKMTVYSHFRDKETLFE
                     TIVLATSDQMIRSLSAPGQDVGLRQRLVTVGTIVLTVILGTDICTMAHTLPAALRANR
                     DLADRFYAAGPGRVRAALAAIIAEAAERGELAVDDPDRAADDLVSLWEGSMPAKLAFG
                     LVGLSTPEEIRLRAERGTDVFLRAYRSSGSG"
BASE COUNT          509 a          857 c          844 g          488 t
ORIGIN      
        1 gctcccatat tgccccaccc tgtctcgaga accacatggc ggaaggtgtg ggcgctcacc
       61 gtccggcgtt aaacatcgga tcgaacgacc gcgattgatt ttcgtcgggc gacgatcctg
      121 ccccgcccac tctaacgcag tacccacctg tccagaaacc catgcacctg ggcgtaactg
      181 tcctcggctg cgggcttgtt gtattccaaa acgtgggagt tgctgacggt gcgcaccatg
      241 ttggggttgt cgaacgcatg ataagcgccg ggatagacgt gcaattcaaa atcctgaccc
      301 gcctgcaacg cggcgccgaa gtcctggcag cgtttcgctg gatggcccca gtcatcgtct
      361 ccgccgacca gcaccagcaa cggcacgtcg ccgtgggtcg ccggatcgac gcagggaccg
      421 taataatcga ccgcggcgcg taacccgaat cccgcatagg cgcgctgcgt cgcgatcgca
      481 gcagtcgcac cgccgtgcga aaggccgagc acggcaatcc gatgcggatc gatctgtgac
      541 tgcgtgcgta accatgcggc ggccgagccg acgtcgccca cccggtccca ccaggttacc
      601 aggttttgcg cggccggttc gcagactcgt ttgacgccac gaggggtcat gctgtccggg
      661 atcagtgccg cgtatcccca gccgttcagg cgcctcgccc agatccattg gctggcgccc
      721 agtccggcgc agccgtggag gacaatgacc acagggaagg ggccgttgcc gacgggaagc
      781 ttgagttcag ccgggattgg agcaatcggc atgcgcgctc caggtaccgc gatcggcgga
      841 atttgcacgg catcggggcc ggagatggtg atcggctgca tgatcggggt gtgtggtgac
      901 ggcgggtcgc atgcaactgc cgtcagcaac agcagggcaa cgatgccaat ccactttgta
      961 gtgcaaatga acacacggtc ggcccggacg ccgaccgagc cgcttccgtg tcgtgtcacg
     1021 gcaggaccga ctgtaaatac aatgtcgcat ccccgaacca ccgtgtttcc accgaagcgc
     1081 gcaccggcaa acgcgttccg cctgagccga cccgcgcaag ccagatcgtt ccccggtgca
     1141 ggcgtcggtc ctggtcaccc gccgagccaa atcggaagcc ggccaatgtc tggctggtga
     1201 atgcgcagcg caacgctcgc ccggagaagc tggactggcc ggtagcccgg atgtcctcct
     1261 cgccctcggt ccgcacctgg aataattcca ggtcacgccc gtcgaagctg tgtgcggagg
     1321 cgtcgcagcg tccggtctcc tcgaccttac ggagcagaaa cacgatcaaa ctgacctgat
     1381 cgacggcgcc ggcgcggagt gccaccggga catcggtgcg ttccgtggca ttcggcggcg
     1441 aaatttgcgt cacctccggg gtgccgtcct gccacgtcat atccacgatg cggttctgcc
     1501 cgtgcagata gccgcttgag gcgaacacct gcggcgtcgc ccggtcgctt ttgaggcctc
     1561 cgctgacggt ttcgtccagc ctgccgccat cgacaatatt ggcgaggcct ctggtgtgga
     1621 aatcgaacga cgcgcggtat ttggaatcag tccgatcgat attcagcgag gcgtcggcga
     1681 ccgggaagcc taccacgtcg agcgcatagt tcagttgttc ggcgacggcg ggatgaaagg
     1741 cgagcgtcga ggtgagacac agcagcacga tcagcggggc gcccggcttc atcccggcag
     1801 tctaggtctg gtttggcggc aatgaaatcg tcattcggga cgcaattgtg accattggca
     1861 aattgtgatc gctgcgtaac gcaccggtag gatcatggtt cctgtcgcag catccgcatg
     1921 tatgcgcaat gtcattgcct tgacaccacg gcgagccgcc gcctatctga tcgagcctaa
     1981 ggcctcggcc ctgacgggcg ggcgcgtagc tcagcggtag agcattcgct tcacacgcga
     2041 gaggtcacag gttcaatccc tgtcgcgccc accaatttct tcggttgcaa acgttcgagc
     2101 cgaggcattt cgcgaatgcg attaccctga gccggacgac cggtatgcgc gcaggaacac
     2161 atcggtgccg cgttccgcac ggagccggat ttcctccggc gtgctcagac cgacaagtcc
     2221 gaaggccaac tttgccggca tgctgccttc ccacaaactg accagatcgt cggccgcccg
     2281 gtcgggatcg tcgaccgcca gttcgccacg ctctgccgct tcggcgataa tcgctgcaag
     2341 tgccgccctc acgcgacctg ggcctgcggc ataaaaccga tccgccagat cgcggtttgc
     2401 ccgcaaggcg gccggcaggg tatgcgccat cgtgcagatg tccgtgccca ggatgacggt
     2461 gaggacgatg gtgccgacag tgacgagacg ctggcgcaat ccgacgtctt gcccgggcgc
     2521 cgaaagggaa cggatcattt gatccgacgt tgccaggacg atggtctcga acagcgtctc
     2581 cttgtcgcgg aagtggctgt agacggtcat cttcgaaaca cgggcaagtt ttgccacggt
     2641 ttccatcgtg accagatcga acggctgact cgcaaacagg cgccgtgcgg cgtcgata
//
LOCUS       DATAVD010000657         6125 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_990927, whole genome shotgun sequence.
ACCESSION   DATAVD010000657 DATAVD010000000
VERSION     DATAVD010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6125
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_990927"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(276..1007)
                     /locus_tag="VHX39_12300"
     CDS             complement(276..1007)
                     /locus_tag="VHX39_12300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3991942.1"
                     /translation="MAASLSITGLDAGYGAVRILHGVSLSVAEGETVALLGTNGNGKS
                     TLMKSIMGMVRPSAGSIVATIDGAAHELVGLSTEAIVDLGIGFVPEGRRLFPRLTVTE
                     NLLMGAFRKAARPRIQQNLAFCFEIFPRLAERRKQLAGSMSGGEQQMLALGRALMSAP
                     RLLLIDEPSVGLAPLLVARTIDKIKELKDNFQLAVLMAEQNFTQAIRIADRGYVIVHG
                     QIAFEGGSADELNNNELIREFYLGV"
     gene            complement(997..1728)
                     /locus_tag="VHX39_12305"
     CDS             complement(997..1728)
                     /locus_tag="VHX39_12305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3991943.1"
                     /translation="MTDALLTVSGLGKRFGGFVALSDVELQIAEGERLGLIGPNGSGK
                     STLVNCLCGTLRNDSGQVTFGGHKLNGLSAHQRTRLGMARSFQLPRPFPTLTLAENVR
                     VPILYTANVKRGRTATDPRQRCEELLDLVGLLPKADHRPSDLTQIEMRKLELARAMAS
                     EPRLLVADEAMAGLSHQEVNDILALLMKLNGQGVTIIMIEHIMRAVLAFSQRLVVLVA
                     GRKIADGSPQDVIRQPDVVAAYLGS"
     gene            complement(1725..2621)
                     /locus_tag="VHX39_12310"
     CDS             complement(1725..2621)
                     /locus_tag="VHX39_12310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3991944.1"
                     /translation="MVAAATFAVALWVGNAYVFFAGYVVLQYIVLATAWNILGGYTGY
                     VNFGTAAFFALGAYSTVVLHKTVPFMPLPVMMMVGGLISGIVGLGMGYLTLRLRGTFF
                     SIATLAMAVVAQTLITNWDFVGGSRGAYIIRPAMSPIFTGDYIEYLFAVMLLLSVISV
                     CIARAIQHSRLGYGFSAIRDDELAAEASGVPTLRLKLIATALSGGLMGMAGAPLPYYV
                     TYLDPASGFSLSYAINTIAMPLIGGTATWLGPVIGAVLLGTLQQLATVTISSALSLLL
                     VGLLLVGFVIAAPRGIVGWFKR"
     gene            complement(2654..3532)
                     /locus_tag="VHX39_12315"
     CDS             complement(2654..3532)
                     /locus_tag="VHX39_12315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3991945.1"
                     /translation="MDLSFDLLGNALVSGLLLGGFYAAVTIGVSISFGMLDIVNIAHP
                     AFIILGSYTAYIANSVFGFDPILSSIVLLPAFYLLGVAIYHVYDVSFERRGDASIRGL
                     AFFFGVLFITEVTLVLVFGVDYRLVDAPYIGPSLHFGVIELPLRLLIPCIVSLALVGV
                     LQLFMSHTFVGRAVQAVAQDPVALRLMAASPSRIKRIAFGLSIASASVAGAVLIIIQP
                     VEPSIGRDYIGRIFAICVMGGLGSFSGTVIAAMILGIMESLTSTFYGPSWSPAVAFGF
                     LLITLAVRPSGLFGRG"
     gene            complement(3873..5822)
                     /gene="acs"
                     /locus_tag="VHX39_12320"
     CDS             complement(3873..5822)
                     /gene="acs"
                     /locus_tag="VHX39_12320"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HEX3991946.1"
                     /translation="MPDTPLADAHLIPVRPEIAAHAHINADRYHAMYQNAARDPDAFW
                     AGEAKRIAWIKPPTKIKNASFTGDVSIKWFEDGTLNASVSCLDRHLATRGDQTAIIWE
                     SDDPSVSKHVTYRELHEQVCRLANAMKILGVVKGDRVTIYMPMVPEAAVAMLACARIG
                     AIHSVVFGGFSPDSLANRLQDCDSSLLITADEGRRGGRKVALKANADEALKTCPGVKN
                     VIVVKVTGGPVSMTPGRDHDYAALTAEASPDCPPAEMRAEDPLFILYTSGSTGKPKGV
                     LHTTGGYMVWASFTHENVFDYRKGEVYWCTADVGWVTGHTYILYGPLANGATTLMFEG
                     IPNYPDSSRFWQVVDKHKVNIFYTAPTAIRALMRDGEGPVKKTSRKSLRILGSVGEPI
                     NPEAWLWYDRVVGEHRCPIVDTWWQTETGGIMISPLPGATALKPGSATLPLPGVQPLL
                     VDGDGNELSGAIEGNLCIRDSWPGMMRTVFGDHERFIQTYFSTFKGLYFTGDGARRDA
                     DGYYWITGRVDDVINVSGHRMGTAEVESALVAHPKVAEAAVVGFPHDLKGQGIYAYVT
                     LNADEEPTEALRKELVAWVRKEIGPIASPDAIQWAPGLPKTRSGKIMRRILRKIAADE
                     TDSLGDTSTLADPGVVTELVHNRIK"
BASE COUNT         1148 a         1788 c         2109 g         1080 t
ORIGIN      
        1 cagttttgtc tgagtgaccg attcacgcgg gcaatggcgg tcacttcgtg gtttgcgctt
       61 taccgcaatc gggcactagg actggattgg gtcgggtcat ggcctgacgt cacgggcggg
      121 gttccgggat gaccgggatc ccgcttcgtg gtttgtaccg gttcggtcca gaactgatgt
      181 gccggcgcct tcggggtggc aacgggcagg tggcactgac aagccgggac atgagggcat
      241 ggggcgtcgt tgacggtctg cccggtcgaa ggcgatcaca cccccaggta gaattcgcgg
      301 atcagctcgt tgttattgag ttcgtcggcc gatccgccct cgaaagcgat ctggccgtga
      361 acgatgacgt agccgcgatc ggcaattcgg attgcttgcg taaaattctg ctcggccatg
      421 agcacggcaa gttgaaaatt gtctttcagc tccttgattt tatcgatcgt gcgggcgacc
      481 agaagcggcg ccagaccgac tgagggttcg tcgatgagca gtagccttgg agccgacatc
      541 agggccctgc cgagggcgag catttgttgc tcaccgccgc tcatggagcc ggcgagctgt
      601 ttgcggcgtt cggcgagacg ggggaaaatc tcgaagcaga atgccaggtt ttgctgaatc
      661 ctggggcggg ccgccttgcg gaaggcgccc atcagcagat tttccgttac ggtcaggcgt
      721 ggaaacagcc ggcgcccttc cggaacgaaa ccgatgccga gatcgacgat cgcctcggtg
      781 gacaggccga ccagttcgtg ggcggcgccg tctatggtgg caacgatcga accggcgctg
      841 ggccgcacca ttcccatgat gcttttcatc agggtcgatt tgccgttgcc gttggtgccc
      901 agaagggcga ccgtttcgcc ctcggcgacc gacagggaca cgccgtgcag gatccgcacg
      961 gcgccgtagc cggcatcgag gccggtgatg gaaagactag ctgccaagat aggccgccac
     1021 gacatcgggt tgacgaatga cgtcctgcgg cgatccgtcg gcgatcttac ggccggcgac
     1081 cagcaccacg aggcgttggg aaaacgccag caccgcacgc atgatgtgct cgatcatgat
     1141 gatggtgaca ccctggccgt tcagcttcat cagcagtgcc aggatgtcgt tgacctcctg
     1201 atgcgacagg ccggccatgg cttcgtcggc gaccagcaac cgcggttcgg atgccatggc
     1261 gcgggcgagt tcgagtttgc gcatctcgat ctgtgtgagg tcgctgggcc ggtggtcggc
     1321 cttcggcagc aggccgacca gatcgagcag ttcctcgcag cgttggcggg ggtccgtcgc
     1381 ggttcggccg cgcttgacgt tcgcggtgta caggatggga acgcgaacgt tttcggccag
     1441 agtcagtgtc gggaatggcc ggggcaactg gaagctgcgg gccatgccca ggcgcgtgcg
     1501 ctgatgggcg gacaaaccgt tcagcttgtg tccgccgaag gttacctgcc ccgaatcgtt
     1561 gcgcaacgtt ccgcagaggc agttcaccag ggtgctcttg cccgaaccgt tggggccgat
     1621 cagccccagg cgctcacctt cggcgatctg tagttcgacg tcggacagag cgacgaagcc
     1681 gccgaaccgc ttgcccaggc cggagacggt cagaagtgcg tcggtcatcg tttgaaccag
     1741 cccacgatgc ccctcggggc ggcgatgacg aagcccacca gcagcaggcc gaccagcagc
     1801 agggacaggg cggacgatat cgtcacggtg gcaagttgtt ggagcgtgcc cagcaggacc
     1861 gcgccgatca ccgggccgag ccaggtggcg gtgccgccga tcagcggcat ggcgatggta
     1921 ttgatggcgt aactgaggct gaagccggac gcgggatcga gataggtgac gtaatagggc
     1981 agcggtgcgc cggccatgcc catcaggccg ccggacaggg cggtggcaat cagtttcagc
     2041 cgcaacgtcg gcacaccgga cgcctcggcg gcgagttcgt cgtcccggat ggcggagaag
     2101 ccgtagccca ggcgggagtg ctggatggcg cgggcgatgc agacggagat caccgacagc
     2161 agcagcatga cggcgaacag gtactcgatg tagtcgccgg tgaagatggg cgacatggcg
     2221 ggccggatga tataggcgcc gcgcgatccg ccgacgaagt cccagttggt gatcagggtt
     2281 tgggcgacga ccgccattgc cagtgtcgcg atggagaaga acgtgccacg cagccgcagc
     2341 gtcaggtagc ccatgccgag gccgacgatt ccggagatca ggccgcccac catcatcatg
     2401 accggcaacg gcatgaacgg gactgtcttg tgcaggacga ccgtcgaata ggcgccgagg
     2461 gcgaagaacg cggcggtgcc gaaattgacg tagccggtgt agccaccgag gatattccac
     2521 gccgttgcca gaacgatgta ttgcagcacg acgtagccgg caaaaaacac gtaggcattg
     2581 ccgacccaca aggcgacggc aaaggtggcg gcggcgacca ccaaggccag caggatgaag
     2641 cggatattgc ccatcagccg cgcccgaaca gaccggaggg ccgtaccgcg agcgtgatca
     2701 acaggaagcc gaaggcgact gcgggcgacc aggacgggcc atagaaggtc gaggtcaggc
     2761 tctccatgat gcccaggatc atcgcggcga tgacggtgcc gctgaagctt cccaggccgc
     2821 ccatgacgca gatcgcgaag atccggccga tatagtcgcg gccgatcgac ggctcgaccg
     2881 gctggatgat gatcaggacc gcgccggcga cggacgcact ggcgatggaa agtccgaagg
     2941 cgattcgctt gatgcggctg gggcttgcgg ccatcagccg cagcgccacc ggatcctgcg
     3001 ccaccgcctg cacggctcgc cctacaaagg tatgcgacat gaagagttgc agcacgccga
     3061 cgagtgccag cgaaacaatg caggggatca gcaggcgcag cggcagctcg atgacgccga
     3121 aatgaagact ggggccgata tagggcgcat cgaccaggcg gtagtccaca ccgaaaacca
     3181 gcaccaaggt cacctcggtg atgaacagga cgccgaagaa gaaggccagg ccgcggatcg
     3241 atgcgtcacc tcgtcgttcg aaggagacgt cgtagacgtg atagatcgcg acgcctaaca
     3301 gatagaaggc gggcagcagg acgatactgg acaggatcgg atcgaatccg aacacgctgt
     3361 tggcgatata ggcggtgtag gagcccagga tgatgaaggc gggatgtgcg atattgacga
     3421 tatcgagcat gccaaaggaa atcgacaccc cgatcgtgac cgcggcataa aagccgccca
     3481 gcagcagccc cgacaccagg gcattgccca gcagatcgaa agacaggtcc attgattcgc
     3541 ttatgacgtt tccggttgcc aatgtggcga atgccggggc gtttggctag tgcccgatcg
     3601 cggtaaagcg cgagtcacga cgtgaccgcg atttcccgcg tgaatcagcc actcggacat
     3661 gactgcgacg tatcgcgctt ctctgatgtg cgatactagc cactattcgc ggggcggcag
     3721 ggcaatcggg taaagcaggg caatcgggta agccggtcac cgtcattcga gcaatccacc
     3781 ggtctgcacg ccatcccgac atgctgcgtg agagccgcga ttgctcaccc gattgccctg
     3841 cgcagggaaa aggccgcgag gtcctggcgg gattatttga tccggttatg caccagctcc
     3901 gtcaccaccc cggggtcggc caaggtcgaa gtatcgccca ggctgtcggt ttcatccgcg
     3961 gcgatcttgc gcaaaatccg gcgcatgatc ttgccgctgc gtgtcttcgg caggccgggc
     4021 gcccattgga tggcatcggg tgaagcgatc ggaccgattt ccttgcggac ccaggcgacg
     4081 agttccttgc gtagtgcctc ggtgggttcc tcatcggcgt tcagggtgac gtaggcgtag
     4141 atcccctgcc ctttcaggtc gtgcggaaag ccgacgacgg ctgcctcggc gactttcggg
     4201 tgggcgacaa gggcgctttc gacttcggcg gtgcccatgc ggtggccgga cacgttgatg
     4261 acgtcatcga cgcggccggt gatccagtag tagccgtcgg cgtcgcggcg ggcgccatcg
     4321 ccggtgaagt acaggccttt gaacgtggag aaataggtct ggatgaaccg ttcgtggtcg
     4381 ccgaacacgg tgcgcatcat gccgggccag gagtcgcgga tgcacagatt gccctcgatg
     4441 gcgccgctga gttcgttgcc gtcgccatcg accagcagcg gctggacgcc gggcagcggc
     4501 agagtcgcgg acccgggttt gagggccgtg gcacccggca gcgggctgat catgatgccg
     4561 ccggtctcgg tctgccacca ggtatcgacg atcgggcagc ggtgctcacc caccacgcgg
     4621 tcgtaccaca gccatgcctc cgggttgatc ggctcgccga ccgaaccgag gatgcggagg
     4681 ctcttgcggc tggtcttttt caccggcccc tcgccgtcgc gcatcaacgc tcgtattgcc
     4741 gtgggggcgg tgtagaagat gttgacctta tgcttgtcca cgacctgcca gaagcggctg
     4801 ctgtccgggt agttcggaat gccctcgaac atcaaggtgg tcgcgccgtt ggcgagcggg
     4861 ccatacagga tgtaagtgtg gccggtgacc cagccgacgt cggcggtaca ccaatagacc
     4921 tcgcccttgc ggtaatcgaa gacgttctca tgcgtaaagc tggcccagac catgtagccg
     4981 ccggtggtgt gcagcactcc cttgggtttg ccggtgctgc cagaggtgta gaggatgaac
     5041 agcgggtctt ccgcacgcat ttccgcgggc gggcaatcgg gtgaggcttc ggcggtcagc
     5101 gccgcgtagt cgtggtcgcg ccctggcgtc atgctgaccg gtccgccggt gaccttcacc
     5161 acgatgacgt tcttcacgcc ggggcaggtc ttcagagcct catccgcgtt ggccttcagg
     5221 gcgaccttgc ggccgccgcg gcggccttcg tcggcggtga tcagcagcga ggaatcacag
     5281 tcctgcaacc ggttggccag gctgtcgggg gaaaagccac cgaacaccac cgaatggatg
     5341 gcgccgatgc gggcgcaggc gagcatcgca acggcggcct cggggaccat tggcatgtag
     5401 atggtgacgc ggtccccctt gacgacgccg aggatcttca tggcgttggc gagccggcag
     5461 acctgttcgt gcagttcccg ataggtgacg tgcttgctga ccgaggggtc gtcgctttcc
     5521 cagatgatgg cggtctggtc gccgcgtgtg gcgagatggc ggtccaggca ggaaaccgat
     5581 gcgttcagcg tcccgtcctc aaaccatttg atcgagacgt cgccggtgaa gctggcgttc
     5641 ttgatttttg tcggtggctt tatccaggcg atgcgtttcg cttccccggc ccagaacgcg
     5701 tcgggatcgc gcgcggcgtt ctggtacatg gcgtgatagc ggtcggcgtt gatgtgggcg
     5761 tgcgccgcga tctctgggcg aaccgggatc aggtgggcat cggcgagggg cgtgtcgggc
     5821 atggacaggg tccttccgtt cattttttgg ttcggacgtg accggcggcg gcaggggccg
     5881 acaggcgttg ggtttcaggc taagcaccat ctggcgacgg ttcaagcaac gccgtcgaaa
     5941 aaagcgtcat gccggccggg catgcagtct ggcgggatgg gcgtgcggtg cgccgatcgg
     6001 caacaccgtt ctgccatggg tttcgttgat gatctcggcg gccgccaggt agaaggccag
     6061 caccgcggtc accaggccca tatagccgcc cgcgacatgc aatgacggga tgccgaacag
     6121 ctccg
//
LOCUS       DATAVD010000658         3999 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_61488, whole genome shotgun sequence.
ACCESSION   DATAVD010000658 DATAVD010000000
VERSION     DATAVD010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3999
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61488"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..671)
                     /locus_tag="VHX39_12325"
     CDS             complement(<1..671)
                     /locus_tag="VHX39_12325"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3991947.1"
                     /translation="MRPPYRALSGLFLLFVLCRFLGPAHGQTLAIASSAPVTSIDPHH
                     HTLAPNVSFDTHVYETLVTRDAAGAMIPGLAVSWKLRDDHTWEFKLRDAKFHDGTQFT
                     AEDVAYTLNRVPRVKNSPASYAIYTKAVSGAEVVDPHTILLHTAGPYPLLPTDLANIF
                     IIPHELGPDPTTEDFNGGKNAIGTGPYRFVSFTPGDRIEMERFDGYWGVKPHWQHVTY
                     RIISN"
     gene            757..1569
                     /locus_tag="VHX39_12330"
     CDS             757..1569
                     /locus_tag="VHX39_12330"
                     /inference="COORDINATES: protein motif:HMM:NF013353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036361 - racemase activity, acting on
                     amino acids and derivatives [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HEX3991948.1"
                     /translation="MKLWYQSMSRQAEWGAYPAVLRSILDNVKDPGTEIHVAGITEIG
                     GVGDQFRYLEYLETGEVLKNVQRAVLEGYDAFLIGNIADPGLREAREIANIPVLGLCE
                     SAMHVACMMGANFSFVTINEKFTPRVVENVDRYGLRARFAGASRMRIDRLTDLGQGFE
                     PGPAQREIIAQFNAAARINTDNGAEVVIAAGGVVMALLAHAGNHATEDGVPILNGITN
                     LVKLGEAAVKLDRIMGGRFVSKKCVYAPPPSDQIETFRKHYGQDIYPTVKAP"
     gene            1566..2456
                     /locus_tag="VHX39_12335"
     CDS             1566..2456
                     /locus_tag="VHX39_12335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3991949.1"
                     /translation="MSITLHAALADYPHVLALKDGSVGSDQTAFAWETVTPITRAFRR
                     MVRTGDFDLCEIALTTLAQAKAFDKSLTGFPVVVMRGFHHAALMCRVGSPLRGPEDLA
                     GKRIGVRAYSQTTGVWLRGILLDSYGVDHRSITWVTEEDAHLQEYRDPANVVRISPGQ
                     SLGTMLLSGEIDAAIALTGLDPASVRTVIPNADEAAADWYRQTGAYPVNHVVCIKTVL
                     LQEHPSLGDELMRLFAAAKTAARGPSAEARFAPIVGPDPLPYGLEANRPSIELCLRYA
                     AEQGLVQHVYTPEQLFLTGG"
     gene            2459..3319
                     /locus_tag="VHX39_12340"
     CDS             2459..3319
                     /locus_tag="VHX39_12340"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX3991950.1"
                     /translation="MDIPRLNGVIKALESGKPAFAPFSGADISSALTIGGAAFDGVVF
                     EMEHGPYDIKMLRDCMQYMLNRRQIATSGSIAPAVTPFVRIPPNGGEHSQWIAKQVLD
                     IGVYGIVWPHVSSVDEARNAVAACRYPRPREAKYYEPAGQRGDAPRTAARYWGLTDQE
                     YYKKADTWPLNPDGEVLVVIMCEEKRAIANLPRMLEQVEGIGVVLIGEGDLSQDLGYP
                     RQYEHPTVASAINEILAICKQYNVPCGHPHVDTRNVEGLIEQGFRFLMPGVVQSFAAL
                     EKGLKASGRT"
     gene            complement(3379..>3999)
                     /locus_tag="VHX39_12345"
     CDS             complement(3379..>3999)
                     /locus_tag="VHX39_12345"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX3991951.1"
                     /translation="ALSYDFDPSQPVPTIGGAFSSLEPVATAGAFDQVESPDFFGCMP
                     PYLPLASRSDVLVFQTAPLQEPMQLVGPIGAELWVETDGPDTDFTANLIDVYPASADY
                     PKGYAMNLTDGIIRLRYAEDPAKPRMRRPGEVTRITVTLYPTANLFQTGHRVQLDISS
                     SNFPKFDVNPNTGEPEGKARRKRIARNTVYLDADRPSLVRLPILAI"
BASE COUNT          838 a         1127 c         1246 g          788 t
ORIGIN      
        1 tcgttgctga tgatgcggta agtgacgtgc tgccagtgtg gtttgacgcc ccagtaaccg
       61 tcgaaccgct ccatttcgat ccgatcgcca ggggtaaacg atacaaaacg atacggaccg
      121 gtaccgatcg cgttcttgcc gccgttgaaa tcctcggtgg ttggatcagg tccgagttcg
      181 tgcggaatga tgaagatatt ggcaaggtcg gtaggcaaca gcggatacgg gccggcggtg
      241 tgcagcagga tcgtatgagg atccactacc tccgcaccac tgaccgcctt cgtgtaaatt
      301 gcgtatgatg ctgggctatt ctttacgcgt ggtacccggt tcagggtgta ggcgacgtcc
      361 tcggcagtga attgcgtccc atcatggaac tttgcgtcac gcagcttgaa ctcccaggtg
      421 tgatcatcgc gaagcttcca cgaaacggcg agaccgggga tcatcgcgcc ggcagcgtcg
      481 cgggtcacga gagtctcgta aacgtgggtg tcgaatgaca cgtttggcgc gagcgtatga
      541 tgatgcggat cgatactcgt gaccggcgcc gacgaggcga tggccagggt ctggccatgg
      601 gctgggccca gaaaccggca aagcacaaac agcagaaaaa gcccggacaa tgcccggtac
      661 ggtggtcgca ttgtgtgtct cccaggctcc ctgaccgcca acatagccat aacgccaatc
      721 ctgagctacc tctggcgggt catcggggag gattgcatga agctgtggta tcagagcatg
      781 tcgcgccagg ccgaatgggg cgcctacccg gccgtgttgc ggtcgatcct ggacaacgtc
      841 aaggaccccg gcaccgaaat tcatgtcgcg gggattaccg agatcggtgg cgttggcgat
      901 cagttccgct acctggaata cctggaaacc ggcgaggtgc tgaagaatgt ccaacgcgca
      961 gtgctggagg gctacgatgc cttcctgatc ggcaacatcg ccgaccccgg cctgcgtgag
     1021 gcgcgcgaga tcgccaacat cccggtcctc ggcctatgtg aatcagcgat gcatgtcgcc
     1081 tgcatgatgg gggctaactt ctccttcgtg acgatcaacg agaaattcac tccgcgcgtg
     1141 gtggagaatg tcgatcgtta cggtctccgc gctcgcttcg ccggtgcgag ccggatgcgc
     1201 atcgaccggt tgaccgacct cggccaaggt ttcgaaccgg gtccggcgca gcgtgagatc
     1261 atcgcccaat tcaacgcagc cgcacggatc aacactgata acggcgccga ggttgtgatt
     1321 gcggcaggcg gcgtggtcat ggcattgctg gctcatgccg gtaatcatgc gaccgaggat
     1381 ggtgttccga tcctcaacgg catcaccaac ctcgtcaagt tgggcgaggc ggccgttaaa
     1441 ctcgatcgca tcatgggcgg gcggttcgtg tccaagaagt gtgtttatgc accaccgccg
     1501 tcggatcaaa tcgagacatt tcgcaagcac tacgggcagg acatctatcc gacggtgaag
     1561 gcgccatgag cattacgctg cacgcggcat tggcggacta tccccatgtg ctggctttga
     1621 aagacggttc agtgggatcc gaccagacgg cgttcgcgtg ggaaaccgta acgcccatca
     1681 cgcgtgcgtt ccgtcgcatg gttcgcaccg gcgattttga tctgtgcgag atcgcgttaa
     1741 cgacgctggc ccaggcgaag gcgttcgata agagcctgac cggatttccg gtggtggtaa
     1801 tgcggggatt tcatcacgcg gcattgatgt gccgggttgg gtcgccgcta cgcgggcctg
     1861 aagacctcgc tggcaaacgt atcggcgtgc gagcttattc gcaaaccacg ggggtctggc
     1921 tgcgtggcat cctgctggac agctatggtg tcgaccaccg ttcgatcacc tgggtgaccg
     1981 aggaagacgc gcatctccag gaatatcggg acccggcgaa tgtcgtgcgt atcagccccg
     2041 gtcagagcct tggaacgatg ctgctgtccg gcgaaatcga cgcggcgatt gcgctgaccg
     2101 gcctggatcc ggcatcggtg cgcacggtca ttccgaatgc agatgaggca gctgcggact
     2161 ggtatcgtca gacaggcgcc tatccggtca atcacgtcgt ctgcatcaag actgtattgc
     2221 tgcaggaaca tccatccttg ggcgacgaac tgatgcggct gttcgctgcg gccaagacgg
     2281 cagcgcgtgg accgagcgcc gaagcgcgct tcgcaccgat tgttggtccc gacccattgc
     2341 cctatggcct ggaagcaaac cgacctagca tcgaactctg cctgcggtat gcggcggaac
     2401 aagggttggt gcaacacgtg tatacaccgg aacaattatt tctcacagga ggctaacgat
     2461 ggacatccct cgcctgaatg gcgtgatcaa ggctttggaa tccggcaagc cggcattcgc
     2521 accctttagt ggggccgata tcagcagcgc gttgacgatc ggtggcgcgg cattcgacgg
     2581 cgtcgtgttc gaaatggagc atggtccgta tgacatcaag atgttgcggg actgcatgca
     2641 atacatgctg aatcggcgac agattgccac gtcgggcagt atcgcgccgg cggtcacacc
     2701 gttcgtacga atcccgccca atggcggcga gcatagccaa tggatcgcca aacaggtgct
     2761 cgacatcggt gtttatggca tcgtgtggcc gcatgtttcg tcagtcgatg aggcacgcaa
     2821 cgcagtcgcc gcatgccggt atccacggcc gcgggaagcg aaatactatg aacctgccgg
     2881 tcagcgcggt gacgctcccc ggaccgctgc gcgctactgg gggctgaccg atcaggaata
     2941 ttataagaaa gccgatacgt ggccgctgaa cccggatggc gaagtcctgg tcgttattat
     3001 gtgcgaggaa aaacgcgcga tcgccaacct gcccagaatg ctggaacagg tcgaaggcat
     3061 cggcgtcgtg ctgatcggcg agggtgacct gtcgcaggat ctgggctacc cgaggcaata
     3121 cgaacacccg acggtcgcct cggcgatcaa cgaaattctg gcgatctgca agcagtacaa
     3181 tgtgccttgc ggccatccac atgttgacac caggaacgtg gaaggactga tcgagcaagg
     3241 tttcaggttt ttgatgcccg gcgtcgttca gtcatttgcg gcgttggaaa agggcctgaa
     3301 ggcatctgga cgcacctgaa ctgcggttca gatcgaggcc atggaacccc tcatcgcaaa
     3361 gagcgatgac gaggagtgct aaatggcaag gatcggaagg cggaccaaac tcggtcggtc
     3421 ggcatcaagg taaaccgtgt tgcgcgcgat gcgtttgcgc cgcgccttcc cctccggctc
     3481 accggtattc gggttcacgt cgaattttgg aaaattcgat gaagaaatat cgagctggac
     3541 acgatggccg gtctgaaaca aattcgcagt gggatacaaa gtcaccgtta ttcgcgtcac
     3601 ctctccaggc cgccgcattc tcggctttgc cggatcctcc gcgtagcgca gccggatgat
     3661 tccgtcagtc aggttcatcg cgtatccctt cggatagtcc gccgaggccg ggtagacatc
     3721 gatcagattc gccgtaaaat ccgtgtcggg accgtcggtt tcgacccata gctcagcccc
     3781 gatggggcca acgagttgca tcggttcttg caacggtgcc gtttggaaca ccagaacgtc
     3841 cgaccgcgag gccaacggca gatacggcgg catgcaacca aaaaagtcag gcgattctac
     3901 ctggtcgaac gccccggccg tagccacggg ctccaaactg ctgaacgcgc caccgatcgt
     3961 gggcaccggc tgcgatggat cgaagtcgta agacaaagc
//
LOCUS       DATAVD010000659         8907 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1176773, whole genome shotgun sequence.
ACCESSION   DATAVD010000659 DATAVD010000000
VERSION     DATAVD010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8907
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1176773"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1149
                     /locus_tag="VHX39_12350"
     CDS             <1..1149
                     /locus_tag="VHX39_12350"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX3991952.1"
                     /translation="TLLDIYPEERRGFAMAVWGMGVMIGPIMGPTLGGFLTEHYNWRW
                     VFYINLPFGILATVGLMIFLPTTLGLNRLRFDWLGFAVLSIGIGALQLALDRGEDLDW
                     FSSPEIIVEAILAGLGFYLFTIHLFSSSQPLLRPALLRDRNFATGLVMMFAVGTLLVS
                     SLALMTPWLQVLSNYPVETAGMIMAPRGFGNLASIILAGRLSNRMDPRYLVGIGLLMV
                     CGSFYVMTGWTPDVSQADIITAIMLQGGGMGLIFTPLQVLAFATVSPALRTEGASLFN
                     LLRNIGAAIGVSVTSTMLARNAQGMHEIIGGNINPFNRALAAVGLFDPATHHGAAVLD
                     QIVNQQAQIVAYADDYVMLIYTILPAILLLLFMRRPRRGSVMAAEPME"
     gene            1317..1538
                     /locus_tag="VHX39_12355"
     CDS             1317..1538
                     /locus_tag="VHX39_12355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991953.1"
                     /translation="MSGPAVNRDNPGRRATFRRPGHSWGIRPSAVLPRAGVTGAPILK
                     GVPRQPPSRSDRLPAPGAQTATPATDGAA"
     gene            1535..3490
                     /locus_tag="VHX39_12360"
     CDS             1535..3490
                     /locus_tag="VHX39_12360"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3991954.1"
                     /translation="MIAAKVFVVEDDPIIAHILREQLLRFGYEVSGIATSGEQALRKI
                     KASQPDLILMDIRIEGSIDGIETATRILRDHQIPIIYTTSSATDEILERARDTKPYGY
                     LIKPFYDRELHATIQMATQRFLGEKALRESEARLDRAQEIAGVGSWELDIASGEFVWS
                     RQLYRIAGLAADANPTVASLAARIHPDDYPAVPAWLAALRTGPRKDPIELRMKHPDGN
                     ERIVRIDGRPLPDHDGTVRRLAGTAQDITERRLIERQLVQAQKMEAIGSLTGGMAHDF
                     NNVLGVIIGNLELLKRLVTSDGEAAALCGEALHGASRCTDLIRRLLAFARRQSLHPER
                     TDVNALVGNIIQLLSRTLGEDITLKLSLGTAVCNVMVDPVQLEAALINLATNARDAMP
                     KGGHLEIKTRSACLEASYAAIWPDVAPGDYALIEISDTGTGIPPEIIGRIFEPFFTTK
                     GPGEGSGLGLSMAFGFVKQSGGHLSAYSEPNLGTTFRLYLPHSDVPAKAAAPFAERPP
                     VVGGDETVLVVEDNAQLRQVTVRQLDGLGYHVLQADGVEAALAILAGGDRIDLLFTDV
                     VMPGTMDGVDLAHRATRLGLKALLTSGFPGVRGAGQRTLDCPFPLLNKPYGLGELAQT
                     IRALLDRRDDPSIQPDPAERTMRLEQV"
     gene            3493..4983
                     /locus_tag="VHX39_12365"
     CDS             3493..4983
                     /locus_tag="VHX39_12365"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX3991955.1"
                     /translation="MRVLVFDDDDAIGRLVVRVATMSGMDATAVTGADAFAEHLRQDP
                     PQVVVLDLQLQGTDGVEQMRLLADRHYAGALVLMSGYDPRVLASAHAVGQNLGLKVER
                     VLEKPLRIEDLEQVFQRLQSAERSLTAERLLEAISENELALDFQPIVTRQPKALKTLE
                     TLVRWEHPVLGRIPPADFMPIAESNVTITDALIDWVVGAAMDAHQVLAELGLQVPLSV
                     NVSTQNLHDLTLPDRLEQRLRAGGMPPDHLCLEITESAAFKDTGRTMDILSRIRLKGM
                     HLSIDEFGNGASSFAMLRQMPFSEIKIDRSFIADVTASRGSRAIVKSIIDLAAGLDMN
                     CVAVGVETAAIADTIEQMGPCCLQGFFIARPMPVEAVLPWVATGMWSDPQGVGEIQVA
                     AAKRGQGEVSPVPSEPVSSAPMSSSPVSSPPSAAKSGGEVVRLSPRQIEVMQLLSEGC
                     AVKEIAYRLNIGISTVKVHLSLAYSALQSRNRIDAIRRAAPMLVSR"
     gene            5242..5415
                     /locus_tag="VHX39_12370"
     CDS             5242..5415
                     /locus_tag="VHX39_12370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEX3991956.1"
                     /translation="MLEYLTTWVSLKTDRRGVTALEYGLIAALIAGVIVVAVTAVGVN
                     IGAKFTTLAADLV"
     gene            5593..6126
                     /locus_tag="VHX39_12375"
     CDS             5593..6126
                     /locus_tag="VHX39_12375"
                     /EC_number="3.4.23.43"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEX3991957.1"
                     /translation="MRHVLHITGPSFVSLIFLLFCSSVMLVASLHDIATRTIPNQLAL
                     ALVIAGISASAIGGHLFGSLAAASGVFALSAVCWRRGWMGGGDVKLLGAASVGMPAGS
                     VLTFIAAVAMAGGVLALFYLLARQLLPFHRSPRPNGMLARVLRAERWRISRGGPLPYA
                     CAITAGAFFIDLFGRMS"
     gene            6123..6962
                     /gene="cpaB"
                     /locus_tag="VHX39_12380"
     CDS             6123..6962
                     /gene="cpaB"
                     /locus_tag="VHX39_12380"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HEX3991958.1"
                     /translation="MIVRLAFFALMALGLLGFGSVLWVSTRPPPPSAATLAASATVIV
                     LAAAHPIRAGNLLKPEDLKEKQMTRGDAGVDASLDTPDDRRALVGAMVRVSLDTGDVV
                     RMKDVMRPGDHGFLAAVLGPGMVAVSVGVDAITGAAGLIWPGDRIDLILTQSIGDTTI
                     PIGHRIAAETILRDVRVIAIDQQLVQGAAPGGTEEKGRTVTMEVTPAQAERVSVATRI
                     GRLSLAVRSADGTPAAAPARKPETTTWASDVSPALGTGVAHGARNELRVYHGSGDGKE
                     SRF"
     gene            6962..8374
                     /locus_tag="VHX39_12385"
     CDS             6962..8374
                     /locus_tag="VHX39_12385"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II and III secretion system protein family
                     protein"
                     /protein_id="HEX3991959.1"
                     /translation="MRISGKIFCWMTIGWACLAAHCAALAQPPPSPPQYGSVTIQSGS
                     GSVITFRSAAANVFVADPKVADVHPASSTSLFVFGVSVGRTTVAALDTAGHLISQYEV
                     TVRPSGFRASEAQAAIARLVPGSQVKALAQARGLLLSGQVDNSGDVARVMAIAKGYLA
                     DNQTVENELTVHSRMQVTLRVRIAEVSREVVQNLGINWQALGSFGNIGKIPALSLTAN
                     AAASPGCLVGKLVIASPTSALTNCQGAGFNGIINALAQDNLARVLTEPNLTVMSGQTA
                     SFLVGGEFPIPVGQQGGQITIDFKKYGITLAFLPTVFSDGRINIHVSPEVSQLTTAGA
                     VQLTAGNSTIQVPALLVRRADTTVELGSGETFAIAGLLQDNLSQDTSGVPFLDDIPGL
                     GAAFKSNAFDRTQTELVILVTPIIVRPVRDIATLHLPTDGLTIPNDLERIMLNRQVGR
                     TPGIPPTRIEIPGDAGFIVQ"
     gene            8371..8667
                     /locus_tag="VHX39_12390"
     CDS             8371..8667
                     /locus_tag="VHX39_12390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991960.1"
                     /translation="MIRTFLFVMVAFVAGCANVEPYHRTDVWYPTGSNAGNIAAMAAN
                     PNDLIRGRSGQQGDARQAATAIDRIWEGHPKPLGIAGATPAPTGAAAGPGAPGQ"
     gene            8664..>8907
                     /locus_tag="VHX39_12395"
     CDS             8664..>8907
                     /locus_tag="VHX39_12395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991961.1"
                     /translation="MTDVLPEGVTVDRRRAGRPKDVSPELLPLMRGTADPSVVRQVAT
                     RYQRPALIAFVTDAASERAVCDGLADAVPGGVDVRRG"
BASE COUNT         1558 a         2989 c         2771 g         1589 t
ORIGIN      
        1 acgctgctcg acatctaccc ggaggagcgg cgcggattcg ccatggcggt ctggggcatg
       61 ggcgtcatga tcggcccgat catggggccc accctcggcg gtttcctgac cgaacactac
      121 aactggcgct gggtcttcta catcaacctg ccgttcggca tcctcgcgac cgtcggcctg
      181 atgatcttcc tgcccacgac actcggcttg aaccgcctgc gcttcgactg gctgggcttc
      241 gccgtgctgt ccatcggcat cggcgcgctg cagctcgcgc tcgaccgcgg cgaggacctc
      301 gactggttct cctccccgga aatcatcgtg gaggccattc tcgccggcct cggcttctac
      361 ctgttcacca tccatttgtt ttccagcagc cagcccctgc tccggcccgc cctgctgcga
      421 gacagaaatt tcgccaccgg actggtgatg atgttcgcgg tgggcacgtt gctggtctcc
      481 agcctggcgc tgatgacacc ctggctccag gtgctcagca actacccggt ggaaaccgcc
      541 ggcatgatca tggcgccgcg cggcttcggc aatctggcct ccatcatcct cgccggccgc
      601 ctgtcgaacc ggatggatcc ccgctatctg gtcggcatcg gcctgctcat ggtctgcggc
      661 tcgttctacg tcatgaccgg ctggacaccc gacgtgtcgc aggccgacat catcaccgcg
      721 atcatgctgc agggcggcgg aatgggactg atcttcacac ccctgcaggt tctcgccttc
      781 gccaccgtgt cgccggccct gcgcaccgag ggcgcgtcgc tgttcaacct gctgcgcaac
      841 atcggcgccg cgatcggcgt ctccgtcacc tccacgatgc tcgcccgcaa cgcccagggc
      901 atgcacgaga tcatcggcgg caacatcaat cccttcaacc gcgccttggc cgctgtcggc
      961 ctgttcgatc ccgcgaccca ccacggcgcc gcggtgctgg accagatcgt caaccagcag
     1021 gcccagatcg tcgcctatgc cgacgactac gtgatgctga tctacaccat cctgcccgcg
     1081 atcctgctgc tgctgttcat gcgccgcccg cgccgcggca gcgtcatggc ggcggagcca
     1141 atggagtaga acgactgccc acccgaggtc cggcgccacc aggtcgggcc gtgctggtgt
     1201 tcagagacaa atcaggccac cgcgggatcg tatttacggt ttgttaaaca ttttgcggcc
     1261 aactgtgaca gccacggaaa aaatcgtgtg gctctgcttc ttcatggaaa cgcgccatgt
     1321 cgggacctgc ggtcaatcgc gacaatcccg gccgccgggc aacgttccgg cggcctggac
     1381 atagctgggg catccgcccc tccgccgtgc tgccgcgcgc cggcgtcacc ggcgcaccca
     1441 tcctgaaagg cgtgccacga caaccgccat cgcgctcaga ccgtctgccc gcccccggcg
     1501 cacaaaccgc gacaccggcc acggacggtg cggcgtgatc gccgccaagg tcttcgtggt
     1561 ggaagacgat ccgatcatcg cgcacatcct gcgggaacaa ctgctccggt tcggatacga
     1621 ggtgtccggt atcgccacat cgggcgaaca ggcgctgcgg aaaatcaagg cctcgcagcc
     1681 tgacctcatc ctcatggaca tccgcataga gggcagcatc gacggcatcg aaaccgcgac
     1741 acggatcctc cgcgaccacc agatccccat aatctacacc acaagctccg ccaccgacga
     1801 aattctggag cgggctcgcg acaccaagcc ctacggctac ctgatcaagc cgttctacga
     1861 ccgggaactg cacgccacga tccagatggc cacgcaacga ttcctcggtg agaaagcatt
     1921 gcgcgaaagc gaggcacgcc tcgaccgagc gcaggagatc gccggcgtcg gcagttggga
     1981 actggacatc gccagcggcg aattcgtctg gtcccgccag ctctatcgga tcgccggcct
     2041 cgcggcggac gccaatccga ccgtcgcctc cttggccgcc cgcattcatc ctgacgatta
     2101 cccggcggtg ccggcgtggc tcgcggcgct gcggaccggg ccccgcaaag acccgatcga
     2161 actgcggatg aagcacccgg acggcaacga gcgcatcgtg cgcatcgacg gccgcccgtt
     2221 gccggatcac gacggcaccg tccgccggct tgccggaacc gcgcaggaca tcaccgaacg
     2281 caggctgatc gagcgccaac tggtgcaggc gcagaagatg gaggcgatcg gcagcctcac
     2341 cggcggcatg gcgcacgact tcaacaacgt gctcggcgtc atcatcggca acctggaact
     2401 actgaagcgg ctggtcacca gcgacggcga ggcagccgct ctctgcggcg aggcgctgca
     2461 cggtgcatcc cgctgcaccg atctgatccg ccggctgctg gccttcgccc gccgtcagtc
     2521 gttgcatccg gaacggaccg acgtaaacgc gctggtcggc aacatcatcc agttgctcag
     2581 ccgcaccctc ggtgaggaca tcacgctgaa gctgagcctc ggcaccgccg tatgcaacgt
     2641 catggtcgat ccggttcagc ttgaagccgc cttgatcaac ctggcgacca atgctcgcga
     2701 tgccatgccg aagggcggcc atcttgagat caagacccgc tccgcctgtc tggaggccag
     2761 ctacgcggcg atctggcccg atgtcgcacc cggcgactat gccctgatcg aaatcagcga
     2821 caccggcacc ggcatcccgc cggagatcat cggccggatc ttcgagccgt tcttcaccac
     2881 caagggaccc ggtgagggca gcggtctggg cttgtcgatg gccttcggct tcgtcaagca
     2941 gtccggcggt catctttccg cctacagcga accgaatctg ggcaccacgt tccggctgta
     3001 tcttccccac agcgatgtcc ccgcgaaagc ggcagccccg ttcgccgaac gcccgccggt
     3061 cgtaggtggc gatgagacgg tgctggtcgt cgaggacaac gcgcaactgc gccaggtcac
     3121 ggtgcggcag ttggacgggc tgggatatca cgtgctccag gccgacggcg tggaggcagc
     3181 gttggcgatc ctggccggcg gcgacaggat cgacctgctg ttcaccgatg tcgtgatgcc
     3241 tggaacgatg gacggcgtcg acctcgccca tagggccacg cggctcggcc tgaaggccct
     3301 gctgacgtcc ggctttcccg gcgtgcgtgg cgccggacag cgcacgttgg actgcccgtt
     3361 cccgctgctc aacaagccct acggtctcgg tgagctggcg cagacgatac gcgcgctgct
     3421 ggaccgccgc gacgacccgt ccattcagcc cgatccggcc gaacggacca tgcgcctgga
     3481 gcaggtgtga ccatgcgcgt gctggtcttc gacgatgacg acgccatcgg ccggctggtg
     3541 gtcagggtcg ccaccatgtc gggcatggac gcgaccgcgg tgaccggcgc cgacgccttc
     3601 gccgaacatc tgcggcagga cccgcctcag gtcgtcgttc tggacctgca actgcagggc
     3661 accgacggcg tggagcagat gcggctgctg gccgatcgcc actacgccgg cgcactggtg
     3721 ttgatgagcg gctatgaccc gcgggtgttg gcctccgcgc acgcggtggg acagaacctc
     3781 ggtctgaagg tcgagcgcgt gctggaaaag ccgttgcgca tcgaggacct ggagcaggtg
     3841 ttccaacgtc tgcaatcggc ggagcgatcg ctgacggcgg aacggctgct cgaagccatt
     3901 tccgagaacg aactggcgct cgatttccag ccgatcgtga cccggcagcc gaaggccttg
     3961 aaaaccctcg agaccctggt gcggtgggag catcccgtgc tgggccgcat tccaccggcc
     4021 gacttcatgc cgatcgccga gagtaacgtc accatcaccg acgccctgat cgattgggtc
     4081 gtcggcgccg cgatggacgc ccatcaggtg ctggccgaac tcgggcttca ggtgccgctt
     4141 tcggtgaacg tctccacgca gaacctgcac gacctgacct tgcccgatcg tctggaacag
     4201 cgcctgcgcg ccggcggcat gccgccagac catctctgtc tcgaaatcac cgaaagcgcg
     4261 gcgttcaagg ataccggccg aaccatggat atactgagcc gcatcagatt gaaggggatg
     4321 cacctgtcga tcgatgaatt cggcaacggc gcttcttcct ttgccatgct gcggcagatg
     4381 ccgttttccg aaatcaagat cgaccggtcg ttcatcgccg atgtgacggc gtcgcgaggc
     4441 tcccgggcga tcgtgaaatc catcatcgac ctggcggccg gcctcgacat gaattgcgtc
     4501 gcggtggggg tcgagacggc ggcaatcgcc gataccatcg aacagatggg tccctgctgc
     4561 ctgcaggggt ttttcattgc caggccaatg cccgtcgagg cagtcttgcc atgggtcgcg
     4621 acgggaatgt ggagcgatcc acaaggggtc ggtgagatcc aggtggccgc ggcgaagcgt
     4681 ggccaaggtg aagtgtcgcc cgtgccatcg gagcccgtct catcagcgcc catgtcatcg
     4741 tcgcccgtgt catcgccgcc ctcggccgcc aagagcggtg gtgaagtcgt gcgattatcg
     4801 ccacgccaga tcgaagtcat gcagctattg tccgaagggt gcgcggtgaa ggaaatcgcc
     4861 taccggctca atatcgggat cagtacggtg aaagtgcatt tgtcgctcgc ctattcggca
     4921 ttgcagtcac gcaatcgtat cgacgcgatc aggcgcgcgg cacccatgct ggtcagtcga
     4981 tgaatcaagt aaatcataga ttcacaaagg atcttcggtt gacgccagat tctctcgcca
     5041 cgcaccacgc cttgagaacg cgtacgattg tatcgccgcc atgcgacgac agatcgaggt
     5101 accagaccga cgacctggcc actcggatag gccgtaaagc cgaatggaag ccagtcgttg
     5161 tgccgcctat gttctcgtca aggagcaggc actacgggat tggcaatggg ctccttacca
     5221 acaacttgac ggagtgaaac catgcttgaa tatctcacga cctgggtcag cctgaaaacc
     5281 gatcgccgcg gcgtgacggc gctggaatac ggcctgatcg ccgccttgat tgccggcgtc
     5341 attgttgtgg ccgttacggc cgtcggcgtg aatatcgggg caaagttcac cacccttgcc
     5401 gccgacctgg tctagtgccc gaacgcggta aagcacgagt cacgaagtga ccgcgatttc
     5461 ccgcgtgaat cggtcgctca gacaaacctg cgacgtatcg cgcttctctg gtgcgcgata
     5521 ctaggcaaac ctgaccgtgc tgggcgtctg cgaaacagga cgcaccgcac ccattctcgc
     5581 ctggcttcgc gtatgaggca tgtgttgcac attaccggcc cttcgttcgt ttctctgata
     5641 ttcctgctgt tttgcagcag cgtcatgctt gtcgcctcgc tgcatgatat cgctacacga
     5701 acaattccga accaattggc actggcattg gtgatcgccg gcatatccgc gagcgcgatc
     5761 ggcggccacc tgttcggatc gctggccgcg gcgagcggcg tttttgccct ttcggcagtc
     5821 tgctggcgcc gaggctggat gggcggcggc gatgtgaaac tcctcggcgc cgcttccgtc
     5881 ggcatgccgg ccggttccgt cctcaccttt atcgcggcgg tggccatggc gggtggcgtg
     5941 ctcgccctct tctatctgct ggccaggcaa ctgctaccat tccaccggtc accgcggccc
     6001 aacggcatgc tcgcacgtgt gctccgggcg gagcgctggc ggatcagccg tggcggccca
     6061 ttgccttatg cctgtgcgat caccgccggc gcgtttttca tcgatctgtt cgggcgcatg
     6121 tcatgatcgt gcggctcgcc tttttcgcat tgatggccct gggcctgctg ggttttggca
     6181 gcgtcctttg ggtctcgacc cggccgccgc caccgagcgc cgcgacactc gccgcatcgg
     6241 cgacggtcat cgttctggcc gcggcacatc cgatccgcgc cggcaacctg ctgaagccgg
     6301 aagacctgaa ggaaaagcag atgaccaggg gcgacgccgg tgtcgacgcg agcctcgaca
     6361 cgccggacga ccgccgtgcc ctggtcggcg cgatggtgcg cgtcagtctg gataccggcg
     6421 acgtggtgcg gatgaaggat gtcatgcgcc ccggcgatca cggattcctc gccgcggtgc
     6481 tgggtccagg catggtggct gtcagtgtcg gtgtagacgc gatcaccggc gccgccgggt
     6541 tgatctggcc gggtgaccgc attgatctga tcctgaccca gtcgatcggc gataccacca
     6601 ttcccatcgg gcatcgcatt gcagccgaaa caatactgcg ggacgtgcgg gtgatcgcca
     6661 tcgaccagca gttggtgcag ggtgccgcgc cgggcggcac cgaagaaaaa ggccgcaccg
     6721 tcacgatgga agtcacaccg gcgcaggccg agagggtgtc tgtcgccacc cggatcggcc
     6781 ggctgtcact cgcggtgcga tccgccgacg gcacaccggc ggccgccccg gcccgtaagc
     6841 ccgaaaccac gacctgggcc agtgacgtct cacccgcgct gggcaccggc gtggctcacg
     6901 gtgcgcgcaa cgaactgcgc gtgtaccacg gatccggcga tggcaaggag tcccggttct
     6961 gatgcggatt tcgggtaaga tcttttgctg gatgacgatc ggctgggctt gcctggcggc
     7021 ccattgcgcc gccctcgcgc agccgccgcc gtcgcctcct caatatggtt cggtaacaat
     7081 ccagtccggc tcgggcagcg tgatcacgtt ccgatcggcc gcggccaacg tctttgtcgc
     7141 cgaccccaag gtggcggacg tgcatcccgc cagttccacc agcctgttcg tattcggcgt
     7201 cagcgtgggc cgtaccaccg tcgcagcctt ggacaccgcc ggacacctga tttcgcaata
     7261 tgaggtcacg gtgcggcctt ccgggttcag ggcgtcggag gcgcaggccg ccattgcccg
     7321 tctggtgccg ggcagccagg tgaaggcact ggcccaggca cgcggtttgc tgttgagcgg
     7381 gcaggtcgac aactctggcg acgtcgctcg cgtgatggcc attgccaaag gctatctggc
     7441 ggacaaccag acggtcgaga acgaactgac cgtccactcc aggatgcagg tcacattgcg
     7501 tgtccgcatc gccgaagtgt cgcgggaagt cgtccagaat ctcgggatca actggcaggc
     7561 gctcggtagc ttcggcaata tcggcaaaat tcccgccctc tcgctcaccg ccaacgcggc
     7621 tgcctcaccg ggctgtctgg tgggcaaact ggtcatcgca tcgccaacct ccgcgctgac
     7681 gaactgccaa ggggccggtt tcaacggtat catcaacgcg ctggcacagg acaatctggc
     7741 ccgcgtcctg accgaaccga acctgacggt catgagcggc cagaccgcca gcttcctggt
     7801 cggcggggaa tttcccattc cggtcggcca gcaaggcggg caaataacga tcgacttcaa
     7861 gaaatacggc atcaccctgg ctttcctgcc caccgtgttc agcgacggcc gcatcaacat
     7921 ccatgtcagc ccggaagtca gtcagttgac caccgccggt gcggtgcaac tcaccgccgg
     7981 caactccacc atccaggttc cggctctgct ggtgcgccgg gcggatacga ccgttgagtt
     8041 gggcagtggt gaaactttcg ccatcgccgg actgttgcag gacaacctgt cacaggacac
     8101 cagcggcgtg ccgtttctcg acgacattcc ggggttgggc gcggcattca agtcgaacgc
     8161 cttcgaccgc acccagaccg aactggtgat actggtcacg ccgatcatcg tcagaccggt
     8221 ccgtgatatc gcaacactgc atctgccgac cgacgggctc accatcccga atgacctcga
     8281 gcggatcatg ctcaaccgcc aggttggccg gacacctggc atcccaccga cccggatcga
     8341 gattcctggc gatgccgggt tcatcgtgca atgatccgca ccttcctttt cgtgatggtt
     8401 gctttcgtcg ccgggtgcgc gaacgtcgag ccgtatcatc gcactgacgt ctggtacccc
     8461 accgggtcca acgccggaaa catcgcggcg atggccgcca acccgaacga cctgatccgg
     8521 gggcgaagcg ggcagcaagg cgatgcgcga caggccgcca ccgcgatcga tcgcatatgg
     8581 gaaggccatc ccaagccgct cggtatcgcg ggcgccacgc cggcaccaac cggcgcggca
     8641 gccggacccg gagcgccagg tcaatgaccg acgttcttcc cgagggagtc accgtcgatc
     8701 ggcgacgggc aggccgcccc aaggacgtca gtccggagct tctgccgctt atgcgcggca
     8761 cggcggaccc gtccgtcgtg cgccaggtcg ccacccgcta tcaacggccg gctctgatcg
     8821 cgttcgttac cgatgccgct tccgaacggg cggtttgcga cgggttggcg gatgccgttc
     8881 cgggcggcgt ggatgtgcgc cgtggcg
//
LOCUS       DATAVD010000660         1540 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_432998, whole genome shotgun sequence.
ACCESSION   DATAVD010000660 DATAVD010000000
VERSION     DATAVD010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432998"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..1121
                     /gene="hpnA"
                     /locus_tag="VHX39_12400"
     CDS             129..1121
                     /gene="hpnA"
                     /locus_tag="VHX39_12400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011387819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hopanoid-associated sugar epimerase"
                     /protein_id="HEX3991962.1"
                     /translation="MTTLITGATGFVGSAVARAMARRGHALRLLVRPSSDRRNVDGID
                     AEIVTGDLTDAASLARAASGCRYVIHVAADYRLWVPVPEDMMRANVDGAVAMIRAAAE
                     AGAERIVHCSSVAALGQIGDGTPADEATPTHEADFVGVYKRSKYRAERAVLELAARES
                     LPVVVVNPAAPVGPRDIKPTPTGKMVLDTAKGKVPAYIDTGLNIVHVDDVAEGHALAL
                     ERGRIGERYVLGGENLLLKDVLALIANVSGQRPPRIQLPEALIWPVAWAMEKTAPLTG
                     IAPMMTRDHLKMARKKMFYSSAKAEAELGYKARPAREAVVDAVAWFRAAGMLRA"
     gene            1121..>1540
                     /locus_tag="VHX39_12405"
     CDS             1121..>1540
                     /locus_tag="VHX39_12405"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3991963.1"
                     /translation="MLTSLAVLSCVIWCWLLTMHGQFWRAGPVLGLAMPTHAPPVAIV
                     VPARDEAPFIARTVGSLLAQNYPGELHITVVDDRSADGTGDLVRGLADDRLAVIEGGD
                     RPVGWAGKLWALHQGVAASGQPEYLFLTDADIEHDRPH"
BASE COUNT          257 a          462 c          520 g          301 t
ORIGIN      
        1 ccgatcagca cgccggccag tgccaggaga taggaaagtt gtttcatctg cgccgcttct
       61 gcccgcgcgc gccggacgcg gcaagcccgc ctttccctgt atgtcggtga tcgtctatgg
      121 aacggacgat gaccacgctg attacaggcg ccacagggtt tgtcggttcc gcggtcgccc
      181 gcgcgatggc ccgtcgcggc catgcgttgc gcttgctggt ccgaccgtcc agcgaccgac
      241 gcaacgtgga cgggatcgac gccgaaatcg tgaccggcga tctgaccgat gctgcctcgc
      301 tcgcacgtgc cgcgtcgggt tgccgctacg tcattcatgt tgcggcggat tatcggctgt
      361 gggtgccggt gccggaggac atgatgcggg ccaacgtcga tggcgccgtg gcgatgatcc
      421 gagccgctgc cgaggccggg gccgaacgca tcgtgcattg cagttcggtc gctgcacttg
      481 ggcagatcgg tgatggcacc ccggcggacg aagcaacgcc gacgcacgaa gccgatttcg
      541 tcggcgtcta taaacgatcc aagtatcgcg ccgagcgagc cgtccttgaa cttgccgctc
      601 gcgagtcgtt gcccgtggtc gtggtcaatc ccgccgcacc cgtcgggccg cgcgacatta
      661 agccgacccc gaccggcaag atggttttgg atacagcgaa aggtaaggtg cccgcttaca
      721 tcgatacagg cctgaacatc gtgcatgtcg acgacgtcgc cgaggggcac gcgctggccc
      781 tcgaacgcgg ccggattggc gaacgctacg tgctcggcgg cgagaatcta ctgctgaagg
      841 acgttttggc cctgatcgcc aatgtctcgg gtcagcgccc tccgcgcatt caattgcccg
      901 aggctttgat ctggccggtt gcatgggcca tggagaagac cgcgccgctg accggaatcg
      961 ctccgatgat gactcgcgat catctgaaaa tggcgcgcaa aaagatgttc tactcctccg
     1021 ccaaagccga ggcagaactg ggctacaagg ctcggccggc gcgtgaggcg gtggtcgatg
     1081 cagtggcgtg gttccgcgct gcgggcatgt tgcgcgcgtg atgttgacct cgctggcggt
     1141 gctgtcctgc gtcatctggt gctggttgct gaccatgcat ggtcagttct ggcgcgcggg
     1201 cccggtactg ggcctggcaa tgccgaccca cgcgccaccg gttgcgatcg ttgtaccggc
     1261 gcgggatgaa gcgccattca ttgctcggac ggttggttct ttgttggctc agaactatcc
     1321 tggcgagctg cacattaccg tggtcgatga ccgtagtgcc gacggcaccg gtgatctggt
     1381 acgcgggctc gcagatgatc gcctggctgt gattgaaggt ggtgaccgcc cggtgggatg
     1441 ggcgggaaaa ttgtgggcac tgcatcaggg cgtggcggcg tcgggtcagc cggaatattt
     1501 attcctgacc gacgcagata tcgagcatga ccggccacac
//
LOCUS       DATAVD010000661         8478 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1736975, whole genome shotgun sequence.
ACCESSION   DATAVD010000661 DATAVD010000000
VERSION     DATAVD010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8478
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1736975"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1656
                     /gene="tssF"
                     /locus_tag="VHX39_12410"
     CDS             <1..1656
                     /gene="tssF"
                     /locus_tag="VHX39_12410"
                     /inference="COORDINATES: protein motif:HMM:TIGR03359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssF"
                     /protein_id="HEX3991964.1"
                     /translation="LAARVHHRLDDEFPELTDALLGMLYPHYLSPVPSCMVARLDCAP
                     DLQLPDTRPVGTEFETEPVRGEALRYRTTAPVTLWPVVVENIRLTGLPIVAPANPAAT
                     GAVAALRITLKCAMPEMTFAQLEVDRLRFFLQGPSNQTLPLYELLGGHVMSVAFADSA
                     TDANPVIVPATSVQPAGFADDEALLPWSARGFAGFRLLTEYFAFPEKFLFIDIANIDR
                     KTMIGAGNRMEIFIYLDRAVSELERTVGQQSMALGCVPIVNLFNRRCEPIAVTHTQTE
                     YRIVPDARRPHFAEVWRIERVRETRPDGSARPWRPFHRLTESDPDPDAPGGFYHPTRR
                     TAAPGVAGTEVYLTPHDPGFDPTVPGNATLSVDALCLNRDLPTDLPYGGGRPTLRLVQ
                     GAASVAGITPVTPPTTTVRPPLRENGFWRLISHLSLSHLSVTGGPAGADALKEVLRLY
                     AFRDTPETSTAIEALMSVTSQPGTARAPGRMGAFCRGLDVTLEFDPRAWQVGGLFLLA
                     SVLERFLALHGTINSFTRTRAVLRGRPGNAGAWPARSGTRVLA"
     gene            1653..2723
                     /gene="tssG"
                     /locus_tag="VHX39_12415"
     CDS             1653..2723
                     /gene="tssG"
                     /locus_tag="VHX39_12415"
                     /inference="COORDINATES: protein motif:HMM:TIGR03347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssG"
                     /protein_id="HEX3991965.1"
                     /translation="MTPRSPLQALAQTPRRFGFDAAVRVLTLARHTEDPAEVAHFRSP
                     PGLTYPPADVVEFHGSPPPLGKPDVTVGMIGLTGPSGVLPRHYTDAVVQSLRNRSASL
                     HAFLDTLSHRFVAFFARAGAKYRPARAAETAALHSPPALDPIARTLLALTGHGTAHLT
                     DRMLITTEPLLHYAGLFALRPRSAERLGAMVSDWLGMRVEVIEFAGAWLTLPPDQRSR
                     IGAYGQFSQLSLNAAAGVRAWDPQARVVLRIGPLDRAGFERLLPDRLALQRLVSLVRA
                     YVGFEIGFAINPVLAADSVPPLRMDATADPKPRLGWNTWLEPMTGGRRRTMDAGEPVF
                     EAEIIEAQQNALPGLASRERAA"
     gene            2720..4216
                     /locus_tag="VHX39_12420"
     CDS             2720..4216
                     /locus_tag="VHX39_12420"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3991966.1"
                     /translation="MSGWGSGYVTDVNYTVGWYRQQSPMMMALASIIGGAAATVPAGD
                     DPVQLLELGCGLGYGAMAQAASNPGWTVTAVDFNPAHVAFAREWAAEAGLTNITFLEA
                     DLSRWEEHPAMRALPEMDFVTMHGVWSWVPPSVQSGIVRLAAQKVRPGGLVHLSYNSL
                     PGWQERVGLARVLRESGRLVAGRSDMQARAGLRVVQDLIAAGAHYTSGTGIAEMVAAL
                     ERTDTHYLAHEFMNEYWAPCFGMDVAAALSEAKLEWIASGSLTDNFPELMLTEPQRDI
                     FNRYSDPLMQELIKDMCAPRGLRHDVFVRGARRINLSERAASLMDVHLTLVKRTEELP
                     DAVTMPAGRAELNKEFYLPVVRALAARPGRVGDLLQLPDLVGRRDNPAELISILIAAD
                     MVTPAARPLAAPGPEAMRFNAVSARRMMGKEPPDRPVAAACQPTGVPLTTPLLALALV
                     EFARAGITDRDALVRAMNITPEQEADARTSVESCLDRFLPILKHAGVF"
     gene            4384..4998
                     /locus_tag="VHX39_12425"
     CDS             4384..4998
                     /locus_tag="VHX39_12425"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX3991967.1"
                     /translation="MRGFMKPSVVIAAIAFSTGGGVALAQQSADSIINALKPTGNLVT
                     GSTRGIRLGGTAAPQAPSPTHSVSATPSSGPAPHSIPRAPDEGASPSINLTVNFPTGS
                     ADLTPAARASLDNLGKALASSDLATFRFRIEGHTDNVGSKEANLLLSQQRAEAVVSYL
                     TSQYNVAPSRLEAVGKGQEEPLVDTPPQTPEARNRRVQVVNLGA"
     gene            5230..6444
                     /locus_tag="VHX39_12430"
     CDS             5230..6444
                     /locus_tag="VHX39_12430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991968.1"
                     /translation="MPQPIDDDATIRLTGPVPPRGGLKFPADEPRVAAALPRAPVRSP
                     RALALVVAASVLAVVLIGIGGWWFWPATRPAGSVPPLAKPQAARTAPEPVAVVPQIAA
                     ASPATGGPAALSSTARGLPGATDTAPDQAEFHFETATEQQILDHVPTTGAAEPTVFRF
                     APNPRILVLDFASLREQGRMLNRIAALVEKAGLPHDRVLTSFEIAAAIKASGDTAETF
                     YYGHDYDAASVIRFFALADRDNIRLLGEEDQLGRMIRQAGWFEPSAQAALISIPQVGA
                     DAHVTRAARATILHHELSHGEYFTNPDYVAFVHRFWTQTLSASERDRIRRHLRSVGYD
                     QGLDEVMENEAQAYLMFTEGAEFFTPEMIGMSQARLAELRNGFFRTMPAGWLHDSLGR
                     TLSLGQSVVGRP"
     gene            6630..7946
                     /locus_tag="VHX39_12435"
     CDS             6630..7946
                     /locus_tag="VHX39_12435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HEX3991969.1"
                     /translation="MSDTVIHQPGSPEIAFPGGLTGRAMRAGQESLNGQRRGLRGFLP
                     FVGPAVIASVAYVDPGNFATNIQAGARYGYGLLWVVTLANLIAMLFQALSAQVGIVTG
                     QSLAALCRTHFPRPVTIAMWVGSEIAAMATDLAETVGAAIGLSLLLGLPLLTSLGLTL
                     VLTWGLLSLQSRGFRPIELIIAGFVGLIGLCYLVELAIAPPDWRLFAWHAVVPEIRDS
                     GALTLAVGIVGATVMPHAIYLHSALMPGRTPTRTHAERAKVIRKSNIEVLIALSFAGL
                     VNLAMVAMAASMFHLGHPEVAEIETAYHTLLPLMGGLAALVFMTSLLASGVSSSVVGT
                     MAGQTIMNDFVGFRTPLWVRRLLTMAPAFVVVAIGVDPTQALVLSQVVLSLVLPVPMV
                     ALLIFVFRRDLMGTFSPGPVTRTAALVGTVVVLGLNMVLLAQLVGV"
     gene            8004..8447
                     /gene="mntR"
                     /locus_tag="VHX39_12440"
     CDS             8004..8447
                     /gene="mntR"
                     /locus_tag="VHX39_12440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-binding transcriptional regulator
                     MntR"
                     /protein_id="HEX3991970.1"
                     /translation="MAEPTPRMMPDEPDQAIRFGKARSAQSGALMEDYVELISDLLAL
                     NGEARPTDIARRLGVSHATVIKTIGRLKREGLAVAKPYRGVFLTEPGETLADRVRSRH
                     RVVVDLLLAVGVPAESAELDAEGIEHHVSDTTLAAFARFLSGKGA"
BASE COUNT         1392 a         2665 c         2786 g         1635 t
ORIGIN      
        1 cttgccgctc gcgtgcatca ccggctggac gacgaattcc ccgagctgac cgacgctttg
       61 ctcggcatgc tgtaccctca ttatctgtcg ccggtgccat cctgcatggt ggcgcggctg
      121 gactgcgcgc cggatctgca attgccggac acaaggccgg tcggcaccga gttcgagacc
      181 gaaccggtgc gcggtgaggc gctacgctat cgcaccaccg cacccgtgac gctatggccg
      241 gtcgtcgtgg aaaatatccg cctgaccggg ctgccgatcg ttgcaccggc caatccggct
      301 gccaccggcg cggttgccgc attacggatc acgctgaaat gcgccatgcc ggagatgacg
      361 tttgcgcaac tggaggtcga ccggctgcgg ttcttcctgc agggcccgtc gaaccagacg
      421 ctgccgctgt acgagttgct cggcggccat gtcatgtcgg tggcgttcgc tgattcggcg
      481 accgatgcca atccggtcat cgtgccggct acatccgtcc aaccggccgg gttcgccgac
      541 gatgaggcct tgttgccgtg gtcggcacgc ggctttgccg ggtttcgcct gttgaccgaa
      601 tatttcgcgt ttccggaaaa attcctgttc atcgacatcg ccaacatcga ccgcaagacc
      661 atgatcggcg ccggcaaccg gatggagatc ttcatttacc tcgaccgggc ggtcagcgaa
      721 ctggaacgca ccgtcgggca gcaatcgatg gcgctgggtt gcgtgccgat cgtcaacctg
      781 ttcaaccgcc gctgcgagcc gatcgcggtc acccacacgc agaccgaata tcgcatcgtg
      841 cccgatgcaa ggcggccgca ttttgcagaa gtctggcgta tcgagcgggt acgggaaacc
      901 aggccggacg gctccgcgcg accgtggcgg ccgttccacc ggctgacgga atcggacccc
      961 gatccggatg cgcccggcgg cttctatcac ccgacgcggc gcactgccgc tcccggggtg
     1021 gcgggcaccg aggtctatct gacaccgcat gatccgggct tcgatccgac cgtgcccggc
     1081 aacgccacgt tgtcggtgga tgcgctttgc ctcaaccgag atttgccgac cgacctgccc
     1141 tatggcggcg gacggccgac cctgcggctg gttcagggtg cggcatcggt tgcggggatc
     1201 acgccggtca cgccaccgac cacgacagtg cgcccgccgt tgcgggagaa tgggttctgg
     1261 cggctgattt cccatctgtc gctcagtcat ttgtcggtca ccggcggccc cgccggcgcc
     1321 gacgcgctca aggaagtgct gcggctctat gcattccgcg acacgccgga aacctcgacg
     1381 gccatcgagg cactgatgag cgtcacctcg cagcctggca ccgcgcgtgc gccaggccgc
     1441 atgggtgcgt tctgccgcgg cctggatgtg acattggagt tcgatccgcg cgcctggcag
     1501 gtcggcgggc tgttcctgtt ggcgagtgtg ctggaacggt ttctggcgct gcatgggacg
     1561 atcaacagct tcacccggac ccgcgcggta ctgcgtgggc ggcctggtaa tgccggcgcc
     1621 tggccggctc gcagcggcac ccgcgtgctg gcatgacacc gcgttcgccg ctgcaggcgc
     1681 tggcgcaaac gccgcgccgg tttggcttcg atgccgccgt gcgcgtgctg accctggcgc
     1741 ggcataccga ggacccggca gaagttgcgc atttccgcag cccgcccggc ctgacttacc
     1801 cgcctgccga cgtggtggag tttcacggca gcccccctcc ccttggcaag ccggatgtga
     1861 cggtcggaat gatcggactg accggtccct ccggcgtgct gccgaggcat tacaccgatg
     1921 ccgtggtaca gtcgctacgc aaccggtccg cgtcgctgca cgctttcctc gacacgctga
     1981 gccatcggtt cgtggcgttc tttgctcgcg ccggagccaa ataccggccc gcgcgtgctg
     2041 ccgaaacagc cgctttgcat tcgcctccag cgctcgatcc aatcgccagg acgttgctgg
     2101 cgctgaccgg gcatggcacc gcccatctca ccgatcgcat gctgatcacg accgagccgt
     2161 tgttgcacta cgccggcctg ttcgcgttgc gcccgcgctc ggcggaacgg ttgggcgcga
     2221 tggtgtccga ctggcttggc atgcgggtcg aggtgatcga attcgccggg gcatggctca
     2281 ctctgccgcc ggatcagcgc agccggatcg gcgcctatgg ccagttcagc cagttgagcc
     2341 tgaacgcggc agcgggcgtg cgcgcctggg atccgcaggc ccgggtcgtg ctgcggattg
     2401 gaccgctgga ccgcgccggg ttcgagcgtc tgttgccgga ccgattggcg ctgcaacggc
     2461 tggtttcgct ggttcgagcc tatgtcgggt tcgagatcgg gttcgccatc aatcctgttc
     2521 tggcagccga tagtgtgccg ccactgcgga tggacgcaac ggcggatcca aagccccggc
     2581 ttggctggaa cacgtggctg gaaccgatga ccggtgggcg gcggcgcacc atggacgcag
     2641 gcgagccggt attcgaggcg gaaatcatcg aggcgcagca aaatgcgttg cctggcctcg
     2701 cgagcaggga acgagcggca tgagcggctg gggcagcggt tacgtaaccg acgtcaatta
     2761 cacggtcggt tggtatcgcc agcaatcgcc gatgatgatg gcgctcgcgt cgatcatcgg
     2821 cggagcagcg gccacggttc cggcgggcga cgatccggtc caactgctcg aactgggctg
     2881 tggcctcggc tatggcgcaa tggctcaggc ggcgagcaat ccgggctgga ccgtcaccgc
     2941 ggtggatttc aatccagcgc atgttgcctt cgctcgcgaa tgggcagccg aagcgggcct
     3001 gaccaacatc acgttcctcg aggcggacct gtcgcgctgg gaagagcacc ctgccatgcg
     3061 cgcgctgccc gagatggatt tcgtcaccat gcatggtgtc tggagctggg tgccgccatc
     3121 cgtgcaaagc gggatcgtcc gcctggcagc ccagaaggtc cggcccggtg ggctcgtgca
     3181 tctgagctat aattcgttac cgggatggca ggagcgcgtt ggcctggcac gcgtgctgcg
     3241 ggaatccgga agacttgtcg cgggccgcag cgacatgcag gcacgcgctg gtttgcgtgt
     3301 cgtgcaggat ctgattgccg ccggggcgca ttacaccagc ggaaccggga tcgccgaaat
     3361 ggttgccgcg ctcgagcgta ccgatacaca ttatctggcg catgaattca tgaatgagta
     3421 ttgggcgccg tgcttcggga tggacgtcgc ggcagccctg agtgaggcca agctggaatg
     3481 gatcgcatcc ggcagcctga cggacaattt ccctgaattg atgttgaccg aaccacaacg
     3541 ggatattttc aaccgttaca gcgatccgct gatgcaggag ctgatcaagg acatgtgcgc
     3601 accgcgcggc ctgcgccacg atgtgttcgt ccgcggcgcg cggcgcatca atttgagtga
     3661 acgggcggca agcctgatgg acgtccacct caccctggta aaacgaaccg aggaattacc
     3721 cgatgccgtc accatgcccg ccgggcgggc cgagctgaac aaggagttct atcttcctgt
     3781 cgtccgggct ctggcggcac gaccaggccg cgtgggcgat ttgctgcaat tgcccgacct
     3841 ggtcggcagg cgagacaatc cggcagagct gatcagcatt ctgatcgctg ccgatatggt
     3901 cacgcccgcc gctcggccgc tggctgcgcc gggacctgag gcgatgcgtt tcaacgctgt
     3961 ttcggcgcgg cggatgatgg gcaaggaacc gccggatcgg ccggttgccg ccgcctgcca
     4021 gccaaccggc gttccgttga ctacgccttt actggccttg gccctggtgg agtttgcccg
     4081 cgccgggatt accgacaggg acgccttggt gcgggcaatg aacattacac ccgagcaaga
     4141 ggctgacgcg cggacctcgg tggagtcctg tctggatcgt tttctgccga tcttaaaaca
     4201 tgctggggta ttctgaactg attgcatacc agtgtattcc gcaaggagtt gcacagcccc
     4261 cgatccagta aaaagatttt ggtcgtaacc cccggttcga tagcaggatc atttgcttac
     4321 agcgatgcac tggcttatta agcacgctac cgagcgtcct ttcgcttgcc caaggagcat
     4381 cctatgcgcg ggtttatgaa gcccagtgtt gttattgcgg cgattgcatt cagtacaggt
     4441 ggaggcgtgg cacttgccca acaatccgcc gattcgatca tcaatgccct gaagccaacc
     4501 ggcaatttgg tcaccggctc gactcgcggg atccgacttg gaggcacggc cgcgcctcag
     4561 gccccatcgc ccactcattc ggtgtcggcg acgccatcca gtgggccggc gccccattcg
     4621 atcccacgcg cgccggatga gggggccagt ccgtcgatca acctgacggt taacttcccc
     4681 accggttctg ccgatttgac gccggcggcg cgggcctcgc tcgacaatct gggcaaggcg
     4741 ctggcctcga gcgatctggc aactttccgg tttcggattg aggggcacac cgacaatgtc
     4801 ggctccaagg aagccaacct gctgttatct cagcagaggg cggaggccgt ggtgtcctac
     4861 ctgaccagcc aatacaatgt cgcgccgtcg cggttggagg ctgtgggaaa gggccaggaa
     4921 gaaccgttgg tcgatacgcc gccgcaaacg ccggaagcac ggaatcgccg ggttcaggtc
     4981 gtcaatctcg gcgcctgaac gggtgtggcc cgtcacgctt cgtgtctgtg gccgactcga
     5041 ggctcgatcg tagtggtggt tccggcgtgc cttgcgccag gaggtggaac cgtccggatc
     5101 cgcactgcaa acaagattga tttcgggtca atctcacact gaagcggctt tgtatgaggg
     5161 catgccgcac gctcgtgggc tatctgtctc agccgatcac gctcagatcc agtttatggc
     5221 catgccggga tgccgcaacc gatcgacgat gatgccacaa tcaggctgac cgggccggtt
     5281 ccgccgcggg gcggactgaa attcccggcg gatgagccgc gagtcgcggc cgcgctgcct
     5341 cgagcgccgg tccgttcgcc tcgcgcgctg gcactggtgg tcgcggcgtc cgtcctggct
     5401 gttgtgttga ttggcattgg cggatggtgg ttttggcctg cgacccggcc ggcagggtcg
     5461 gtgccgccct tggcaaagcc gcaggctgcc cggaccgcac ccgagcctgt tgccgtcgtg
     5521 ccgcagattg ccgctgcgtc ccccgcaact ggcgggccgg cagcgctgtc gtctaccgct
     5581 cggggtttgc cgggcgcgac ggacaccgcg ccggatcagg ccgaattcca tttcgagacc
     5641 gccacggagc agcagatcct ggaccacgtc ccgaccacag gagcggccga gccgacggtg
     5701 ttccgcttcg cgccgaaccc gcgcatcctg gtgctggatt ttgcgtcttt gcgtgagcag
     5761 ggccggatgc tgaaccggat cgccgctctg gttgaaaaag ccggacttcc gcacgaccgg
     5821 gtgctgacca gcttcgagat cgcggctgca atcaaggcca gcggcgatac cgccgaaacg
     5881 ttctattacg gccacgatta tgatgccgct tcggtgatcc ggttctttgc gctcgccgat
     5941 cgcgataaca ttcggctgct cggcgaagag gatcaactgg gccggatgat ccgccaggcg
     6001 ggctggttcg agcccagcgc ccaggcggcg ttgatttcga tccctcaggt tggtgccgac
     6061 gcgcatgtca cacgggccgc aagggccacg atcctgcatc atgagttgtc gcacggcgaa
     6121 tacttcacca atcccgatta cgttgcgttc gttcaccggt tctggacgca gacgctgtct
     6181 gcgagcgaac gtgaccggat ccgtcgtcat ctgcgttccg taggatacga tcaggggctc
     6241 gacgaggtga tggaaaatga ggcccaggcg tatttgatgt tcaccgaggg cgcggaattt
     6301 ttcacgccgg agatgatcgg tatgagccag gcccgcctgg ccgagctgcg gaacggattt
     6361 ttccggacaa tgccggcggg atggctgcac gacagtcttg gccggacatt gagcctgggc
     6421 caatcggtcg tgggccggcc gtaaggtcgt cggctgaaaa cgtagtcagc ttcacgtcct
     6481 cccatcaacg cgtgggttgc cgggaaaatt cgttatgcac cccttgcgac agagtgtagc
     6541 cttggctaca ttctgtgctc agaggtgcaa aacgtggccg gggccacggc aacgcgccaa
     6601 accgcaaccc agatggacca aacgcccgca tgagcgacac cgtcatccac cagcccggca
     6661 gcccggagat cgcctttccc ggcggactga ccggccgtgc catgcgggct gggcaggaaa
     6721 gcctgaacgg tcagcgccgg ggactgcgag ggttcctgcc gttcgtcggt ccggccgtga
     6781 tcgcctcggt cgcttacgta gacccgggca attttgccac caacatccag gccggcgcgc
     6841 ggtatggcta tggcctgcta tgggttgtca cgctggcgaa cctgattgcc atgctgtttc
     6901 aggccctgtc ggcgcaggtt ggcattgtga cgggacagag cctcgccgca ttgtgccgga
     6961 cccatttccc tcgaccggtc acaatcgcga tgtgggtggg aagcgaaatc gccgcgatgg
     7021 ccaccgatct cgccgagacg gtcggcgccg cgatcggcct cagcctgctg cttggattgc
     7081 cgctgctgac cagtcttgga ctgacccttg ttctgacctg gggattgctg agcctgcaat
     7141 cccgtggctt ccggccgatc gaactgatca ttgccgggtt cgtcggcctg atcggacttt
     7201 gctatcttgt cgagctggcg atcgcgccac ccgactggcg cttatttgcc tggcacgccg
     7261 tggtcccgga aattcgcgat tcgggtgcgc tgaccctggc ggtcggcatt gttggcgcga
     7321 ccgtcatgcc gcatgcgatc tacctgcact cggcgctgat gccgggccgc acaccgaccc
     7381 gcacccacgc tgagcgggcc aaggtcatcc gtaaatccaa catcgaagtg ctgatcgcgc
     7441 tgagctttgc cggtctcgtt aaccttgcca tggttgccat ggccgcctcc atgtttcacc
     7501 tgggccatcc cgaggtggcg gagatcgaga ccgcctatca caccttattg ccgctgatgg
     7561 gtggcctcgc cgcgctggtg ttcatgactt cgttgctcgc ttccggcgtg tcgagttcgg
     7621 tggtcggcac catggccggc cagacgatca tgaacgattt cgtcggcttc cggacgccac
     7681 tgtgggtgcg ccggttgctg accatggcac cggctttcgt ggtggtggcg atcggggtcg
     7741 atcccactca ggcgttggtg ctcagccagg tggtgttgag cctggtgttg ccggtgccga
     7801 tggtcgcatt gctgatcttt gtcttccggc gcgatctgat ggggacgttt tcgccgggcc
     7861 cagtgacccg cactgctgcg ctggttggga cggtggttgt gctcgggctc aacatggtgt
     7921 tgttggcaca actagtcggg gtatgatgca gtccggaacc cggtgagata ccggaacagg
     7981 ccaacaaggt ccgatcgaac gggatggcag agccaacacc caggatgatg ccggacgagc
     8041 cggatcaggc gatccgcttc gggaaggcgc gctcggcgca atccggtgcg ctgatggaag
     8101 attacgtcga attgatatcc gacctgctgg cgctgaatgg cgaggcacgc ccgacggaca
     8161 ttgctcgccg actgggcgta tcacacgcca ctgtgatcaa gacgatcggc cggttgaagc
     8221 gcgaggggtt ggcagtcgcc aagccctatc gtggggtgtt cctgaccgag ccgggcgaaa
     8281 ctctggccga ccgggtgcgg tcgagacacc gcgtggtcgt tgacctgcta ttggcggtgg
     8341 gcgtcccggc cgaatcggcc gaactcgatg ccgaggggat cgagcaccat gtctccgaca
     8401 cgaccctggc ggcgtttgcc cgcttcctga gcggcaaagg ggcgtagcgc ccctccgcag
     8461 tcgccgtccc tcaccagg
//
LOCUS       DATAVD010000662         2538 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3225264, whole genome shotgun sequence.
ACCESSION   DATAVD010000662 DATAVD010000000
VERSION     DATAVD010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2538
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3225264"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..641
                     /locus_tag="VHX39_12445"
     CDS             <1..641
                     /locus_tag="VHX39_12445"
                     /inference="COORDINATES: protein motif:HMM:NF012618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991971.1"
                     /translation="LAPRLVLAADTGPFLVLDTGVHEAAINAMARLADGGIVTASDDK
                     TARIWRPDGSDTLAVLYPPIGQRDDGALYAVAASAKVIAVAGRIPTTQGGYGIAFYST
                     QDFRSLGLFAGLPSAVLAMKMSPAGDRLAVGLDGGGLRVFDLKSLTVALEDKDFPGKI
                     TALDFDPSGRLAVAADDNMIRLYDSALHRLPPMTLHAGARAYGIAFSPDGPA"
     gene            607..>2538
                     /locus_tag="VHX39_12450"
     CDS             607..>2538
                     /locus_tag="VHX39_12450"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HEX3991972.1"
                     /translation="MGSPSRRTGRPERDLEGAAGKNGSFNVVAFGADGTSVFGAGSYL
                     DASGTVEIRRWPLAGGAAIDIPVAHDLVTSLLPNGNGVAFATAEPVLGFVDDQNQVHV
                     AQSPRHIDFHDRAATSIRLSHSGAAIEITMLHGRSLAIDVSTRTFLRSIAATQDFGPP
                     AASAYGMTVTDWRDSHTPRVNGEKLALEPAETARSAAVSPAGAVVGTDFFVRFAGKNG
                     SGWKVSAGSPVWAVDASADGRLVVACFGDGTIHWYNAADGRELIALFIDPATERFVVW
                     TSTGYFDHDHRTDGKPDGRTLVGYRMNEPSGHTSDFVSIGQLYPTWFRPDLVGISFRD
                     DGNARKKMDEQEAHAAKVGDVLRDGLPPKVTLLDACAVDSMTATGCTGARAIDLPRGR
                     ATDPPAVTAPVLLVRYKVDYQGSDPGRVVPRLNDAVFNSGIKVESTAAHSRIEHALIP
                     LARGLNVVDLSPVSGSGAVEAASGASPEIRLVRSVETQQNDQNAPVPAPRGQMYVLTV
                     GVSKLANPAWNLANPANDATALADLLRQDKAHLFASVNARTLTDADATKANIIDALKD
                     IAAKATPDDVVVIFLAGHGRTVDGHYYFAPSDMGGHDAGLMAAVNAAKTDDTFDKAVD
                     AVFRAEGLGQDELLPLIQGM"
BASE COUNT          441 a          762 c          849 g          486 t
ORIGIN      
        1 tgctcgcgcc acggctggta cttgcggccg acactgggcc atttttggtg ctggacaccg
       61 gggtgcatga ggcagcgatc aacgccatgg cacggctggc ggatggtggg atcgttacgg
      121 cctccgacga caagaccgcg cgcatctggc gacccgatgg gtccgacact ctggcagtgt
      181 tgtacccgcc gatcggacag cgggacgacg gcgctcttta tgcggtcgct gcctcggcga
      241 aggtaatagc ggtcgccggc cggatcccga ccacgcaggg cggttatggg atcgcgttct
      301 attcaaccca ggacttccgg tcgcttggct tgtttgccgg gctgccgagt gccgttctgg
      361 ccatgaagat gtcgcctgcc ggcgatcggc tggcggttgg gctggacggc ggtgggttgc
      421 gcgtgttcga cctgaaaagc ctgaccgttg cgctggagga caaggacttt ccaggcaaga
      481 taacggcgct ggatttcgat ccatccggcc ggctcgcggt ggcggccgac gataatatga
      541 tccggctgta cgatagcgcg ctgcatcggt tgcctccgat gacgctgcac gcgggtgcgc
      601 gggcgtatgg gatcgccttc tcgccggacg ggccggcctg agcgggacct cgaaggcgcc
      661 gcgggcaaga acggcagttt caacgtggtg gcgttcggtg ccgacggcac ctcggtgttc
      721 ggcgctggtt cctatctcga cgcgtccggc acagtggaaa tccggcgctg gccgctcgcc
      781 ggtggcgccg cgattgacat tccggttgcg catgatctgg tgaccagtct gctgcccaat
      841 ggaaacggcg tggccttcgc aaccgccgag ccggtgttgg gctttgtgga cgaccaaaac
      901 caggtccacg tggcgcagtc gccgaggcat atcgacttcc atgaccgggc cgcgacctcg
      961 atccgactgt cgcacagcgg cgcggccatc gaaattacca tgttgcatgg ccgctcattg
     1021 gccatcgatg tcagcacgcg aacgttcctg cggtccatcg ctgccaccca ggatttcgga
     1081 ccgcccgccg ccagcgctta cggcatgacg gtcactgact ggcgcgatag ccacacacct
     1141 cgggtaaacg gcgaaaagtt ggcattggag ccggcggaga ccgctcggtc cgctgcggta
     1201 tcacccgccg gtgcggtggt gggcacggac ttttttgtgc ggttcgcagg caagaatggg
     1261 tcgggttgga aagtatcggc gggctcgccg gtctgggctg tcgacgccag cgctgatgga
     1321 cgcctggtcg tggcctgctt tggcgatggc acgatccatt ggtacaatgc cgccgacggc
     1381 agggaattga ttgcgctgtt catcgatccg gcgaccgagc ggttcgtggt gtggacctca
     1441 accgggtatt tcgatcacga ccatcgcacc gacggcaagc ccgatggccg gacgttggtc
     1501 ggctaccgca tgaacgagcc gtccggccac accagtgact tcgtttctat cggccaactt
     1561 tatcccacct ggttccggcc tgaccttgtc ggcatttcgt tccgcgatga cggcaatgcg
     1621 cgaaaaaaaa tggatgagca ggaggcgcac gcagccaagg tcggcgatgt gctgcgcgac
     1681 ggactgccgc caaaggtgac gctgctggac gcctgcgcgg tggactcgat gacggcgacc
     1741 ggctgtaccg gtgcccgagc gattgacctg ccgcgcggcc gagcgaccga tccgcccgcc
     1801 gtcactgcgc ctgtcctact tgtccgctac aaggtcgatt accaaggctc cgatcctggg
     1861 cgggtcgtgc ctcgcctgaa cgacgctgtg ttcaacagcg gcatcaaggt cgaatcgact
     1921 gccgcacaca gtcggatcga gcatgctttg atcccgttgg cgcgcggcct gaatgtcgtc
     1981 gatctttcac cggtcagcgg ctccggcgcg gtcgaggcgg ccagcggcgc cagcccggag
     2041 atccgcctcg tgcgatcggt cgaaacgcag cagaacgatc aaaatgctcc ggtgcccgcg
     2101 ccgcgcggac agatgtacgt gttgactgtg ggagtcagca aacttgccaa tccggcgtgg
     2161 aatctggcca atccggcgaa tgatgccact gcgctggcag atttgttgcg ccaggataaa
     2221 gcgcatttat tcgccagcgt gaatgccagg acgctaaccg atgcggatgc caccaaggca
     2281 aacattatcg atgcgctcaa ggacattgct gccaaggcaa cgccggacga tgtcgtggtg
     2341 atattcctcg cgggtcacgg tcgaacggtc gacggccatt attattttgc gcccagtgat
     2401 atgggcggtc acgatgcggg gctgatggca gcggtcaatg cggcgaaaac cgatgacacg
     2461 ttcgacaaag cggtcgatgc cgtcttccgt gcggaaggtc tgggtcagga tgaattgctg
     2521 ccgctgatcc agggcatg
//
LOCUS       DATAVD010000663         5962 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2852894, whole genome shotgun sequence.
ACCESSION   DATAVD010000663 DATAVD010000000
VERSION     DATAVD010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5962
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2852894"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            390..1589
                     /locus_tag="VHX39_12455"
     CDS             390..1589
                     /locus_tag="VHX39_12455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HEX3991973.1"
                     /translation="MADFALAGFAPFFMQSPSFLAHQRHLETGQGRSNCQTLFGMRKI
                     PGDSQIRAKLDAVEPAMFHPMFADLVAELDQCGGLDAMRCLQGCVLIALDGTEFHCSD
                     KIHCPNCSHRKRGNDKIEYFHSLLAATIVAPGHNRVVPLEPEFVVPQDGHDKQDCESR
                     AARRWLAAHGAKYARFDPVYLGDDLFSRQPICQAVLDTGGHFLFVCKPDSHKAIEEFR
                     VGIRLDERIDRKRIGKKWVSHRYQWLSGVPLRGDEKAMTVNWLMIEISDANGKVTYRN
                     SFITDLDVDRENVAELAAAGRARWKIENESFNVLKTKGYNLEHNFGHGKQHLATVLAI
                     LNLLAFACHTVCELGDRAWRAARRELVTRQGFFQSLRTITTYLLFQSWDDLLGTLAFT
                     RPPPLGP"
     gene            1765..2190
                     /locus_tag="VHX39_12460"
     CDS             1765..2190
                     /locus_tag="VHX39_12460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991974.1"
                     /translation="MSGSVLDPQGEFSEPKGSSDRKFGLVMAAACLAFGLLPLLRHGN
                     VRFWLVIPGVLLLVAAIFRPHVLARLNRYWARFGLLLSKVTNPLLMVLLFFGGVWPMA
                     VLMRLFGARPMGLSFDRKAATYWVSRTPRDANATMRKQF"
     gene            2203..2352
                     /locus_tag="VHX39_12465"
     CDS             2203..2352
                     /locus_tag="VHX39_12465"
                     /inference="COORDINATES: protein motif:HMM:NF039953.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5989 family protein"
                     /protein_id="HEX3991975.1"
                     /translation="MSVVLDVLSLLRERKKFWLMPMLLMFLLFGGLLVLTQGSVIAPF
                     LYTIF"
     gene            2354..4192
                     /locus_tag="VHX39_12470"
     CDS             2354..4192
                     /locus_tag="VHX39_12470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase"
                     /protein_id="HEX3991976.1"
                     /translation="MTTRILGISAFYHDSAAAVVVDGEVIAAVQEERFTRKKNDAHFP
                     KNAIQYCLAEAGVELADIDHVVFYEKPLLKFERLLETYHAFAPRGFGSFVKSMPLWLR
                     EKLFQKDMLLRDLKELCPRVSLDNKLLFTEHHQSHAASAFYPSPFREAVILTMDGVGE
                     WATTSVSIGRDNKIEPLREQQFPHSLGLLYSAFTYYTGFKVNSGEYKVMGLAPYGTPR
                     FARTILDNLVDLKDDGSFRLDQSYFDYCTGLTMTSPKFDDLFGGPPRRADELLTDHHM
                     DLAASIQAVTEEIVLRVTRSLADEFKLPYLCIAGGVALNCVANGKVLRDGRFERIWVQ
                     PAAGDAGGALGAALAVQHDMLGAPRKLNGHLDGMKGSYLGPSFTQPDIERRLTESNAV
                     FSVLQDDDLIEATVGALTEGKAVGWFQGRMEFGPRALGARSILGDPRSPDMQRTLNLR
                     VKYRESFRPFAPAVLREDVSEWFDLDSDSPYMLIVAGVAERHRRAMTPEEDKLFGIDK
                     LNIPRSSIPAVTHVDYSARVQTVHEETNPQFHLLLSAFKRHTGCPVLVNTSFNVRGEP
                     IVCTPEDAFRCFMGSEIEVLVVGDCFLRKEEQTAPKLDYKSAFELD"
     gene            complement(4225..>5962)
                     /locus_tag="VHX39_12475"
     CDS             complement(4225..>5962)
                     /locus_tag="VHX39_12475"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEX3991977.1"
                     /translation="SGREGIGTTDVRAILEQEILPLHPDYVVFYDGANQLVSFDGLLP
                     SQIQVQRSGHTRWKPATLFSVWWLEHSRLAALVNGFFQQTMERMEHQRPKPTYALAFP
                     KDFNEDHPNVADSGLPLGLPVFIRDVRTMISDARAAGVPFTMSTLPWLDGSEVKQPGD
                     ARFAHIIEQLDSTFWPLQSADIRRLITLQNRALRRLAETQGVPLLDEAASYPLDPRLF
                     TDMYHLNQEGVRLQAWIMLRNFIPVLQRDLAQGLLSRIQARVGAPVHPVGLQSLVVHP
                     QCAPNAELMSRARVIPTQAIMLVNPAAVQTNSGETQTIRTSAQPWSYAGRLNLYENCV
                     TGAGWVVIKARVSKGTVSIGVLNRREDGFVTRQSVTQSYRSDVINLKIPSFAASGALI
                     VQNGDQAVASEIEIDEVRVVANDGTAPICPIIGDIAASEQSEPVPPADFTAARIVPGA
                     ADLHEFVSGSPGGGTTFSSAAVTIVPPAQQWALGGSLPLKVPESLVNQGWVRVIADVQ
                     QGNVGFGLLDETMKKYVTRVFIGPIGGRVTIMLPLPKRHVPLSLIVENAAPTPATSKA
                     VVQSVDVIVPAE"
BASE COUNT         1207 a         1706 c         1757 g         1292 t
ORIGIN      
        1 cgcgaaccag accacaagcc agcagcactg aggcgccaat cccgatgata cgctgcatcg
       61 caccttcgat catcgttcgg ccatcaccgt gaggcggcgt aacgacctga tgccgcgtcg
      121 gcagcagttc tcattatccc aaacggctga ttttttgaaa tcttcggcgg cgagaagtgc
      181 cgtgatcgat acttcgcggg cccatctcgt gagtctcagt tgcaacagtc accggaagat
      241 ccgtggtctg gtccattttc aggcttccgt ccggcttcga atcaggattc gagcggtgtg
      301 tgccactcca ggaccgcctt ctcgattccc ttcgccgttg ctgccggtcc ttgcccgacc
      361 agcggcgggg tttgaacgcg acctacgata tggccgattt cgccctggcc gggttcgcgc
      421 cattcttcat gcaaagtccg tcgtttctgg cgcaccagcg gcatctggag accggtcagg
      481 gccgttcgaa ctgccagaca ctgttcggca tgcggaaaat ccccggtgac agccagatca
      541 gagccaaact cgacgcggtc gaaccagcca tgttccaccc catgttcgcc gatctcgtgg
      601 cggaactgga ccagtgcggc ggcctggacg ccatgcggtg cctgcaaggg tgcgtactga
      661 tcgctttgga tggaacggaa ttccactgct ccgacaaaat ccattgcccc aactgctccc
      721 atcgcaaacg cggcaacgac aagattgagt atttccacag cttgctcgcc gccaccatcg
      781 tggcacccgg acataaccgg gtcgtaccgt tggaaccgga gttcgtcgtc cctcaggacg
      841 ggcacgacaa gcaggattgt gaaagtcgtg ccgcccggcg ttggctggcg gcgcatggcg
      901 cgaagtatgc ccgcttcgac ccggtttatc tgggcgacga tctgttctct cgccagccga
      961 tctgccaggc cgtgctggat acaggcgggc actttctgtt cgtctgcaaa ccggattcac
     1021 acaaggcgat tgaagaattc cgcgtgggta tcaggctcga cgaacgcatc gaccggaaac
     1081 ggatcggtaa aaaatgggtc tcccaccgct accaatggct ctccggcgtg ccgttgcgcg
     1141 gtgatgagaa agcgatgacg gtcaactggc tgatgattga aatcagcgat gccaacggca
     1201 aagtgaccta tcgcaacagc ttcataaccg atctggatgt cgaccgggaa aatgtcgccg
     1261 aacttgccgc cgccggccga gccagatgga agattgaaaa cgagagcttc aatgttctca
     1321 aaaccaaggg atacaacctg gagcacaact tcgggcacgg aaagcagcat ctggcgaccg
     1381 tgctcgcgat cctcaatctg ctggccttcg cctgtcatac cgtctgcgaa ctgggagaca
     1441 gggcctggcg tgccgcgagg cgggaactgg tgacccgaca gggtttcttc cagagcctgc
     1501 ggaccatcac cacctacctc ctcttccagt cctgggatga tttgctcggg acactggctt
     1561 ttacccgtcc accgccgctt ggaccgtgag cgtttcccga aaagggtgcc atcggagaca
     1621 ggaggacagc gtcaggtcaa aatgagaact gctgggtcga ttggacccaa attgcggatc
     1681 gatgcagaat ccgctagacg atccagaggt gcgtgggcgg ctctcccacg agttcgcggc
     1741 gatataagga gcggtaatcg aaaggtgagt ggcagcgtcc tggatcccca gggggaattc
     1801 tctgaaccaa agggcagttc cgaccgcaag ttcggcctcg tcatggctgc tgcttgcctg
     1861 gcgttcgggt tactccctct cctgcgccac ggaaatgtca gattttggtt ggtgattccc
     1921 ggggttctgc tcctggtggc cgcgattttt cgtcctcatg ttctggcgag gcttaatcga
     1981 tattgggcgc gttttggtct gttgctgagc aaggtgacga atccgctgct gatggtgttg
     2041 ctattttttg ggggtgtctg gcccatggcg gtactcatgc gtctgttcgg tgcacgtccg
     2101 atgggtttgt cgttcgatcg aaaggccgct acctactggg tctcgcggac accgcgtgat
     2161 gctaacgcga ccatgcgtaa gcagttctga ttggaggaat caatgtccgt cgttctcgac
     2221 gtcctgagtc ttctgcggga gcgcaagaaa ttttggctca tgccaatgct gttaatgttc
     2281 ctgctattcg gtgggctgct agtactgaca cagggctcgg ttatcgcacc attcctgtat
     2341 accatcttct aaaatgacaa cccgcattct ggggatatcg gcgttctacc acgacagcgc
     2401 cgccgcggtc gtggtggatg gcgaggttat cgccgccgtt caggaggagc ggttcacgcg
     2461 caagaagaat gatgcacatt tcccgaagaa tgcgatccag tactgcctgg ccgaggccgg
     2521 tgtcgaactt gccgatatcg atcacgtcgt attttacgaa aagccgcttt tgaagttcga
     2581 gcgtctgctc gagacttacc acgccttcgc tcctcgcggc ttcggctcgt tcgttaaatc
     2641 gatgccactg tggttgcgtg agaagctgtt ccagaaggac atgttgctgc gtgatctgaa
     2701 agagctttgc cctcgggtct cactggacaa taaactatta tttacggagc accatcagag
     2761 ccacgctgcc agcgccttct atccttcacc ttttcgggag gcggtcatcc tgaccatgga
     2821 tggcgtcggg gaatgggcga ccacctcggt cagcatcggc cgggacaaca agatcgagcc
     2881 gttgcgtgag cagcagtttc cccattctct gggtctgctg tactccgcct ttacatatta
     2941 taccggcttc aaagtgaatt caggtgaata taaggtcatg ggtcttgcgc cgtacggtac
     3001 gccgcggttt gcccggacga tcctggataa tttggttgac ctgaaggatg acggcagttt
     3061 ccggctggat cagagctatt tcgactactg caccggcctg accatgacat cgccaaaatt
     3121 cgacgatctt ttcggcggac cgccgcggcg cgcagatgaa ttgctgaccg accatcatat
     3181 ggatctggcg gcgtcgatac aggcggtgac agaagaaatc gtcctgcggg tgacgcgttc
     3241 attggccgac gagtttaagt tgccatacct gtgcatcgct ggcggcgtgg cgctgaattg
     3301 cgtggcgaac ggcaaagtgc tgcgcgacgg ccggttcgag cgtatctggg tgcagcctgc
     3361 tgccggtgac gcgggcggcg cgcttggcgc agcgcttgct gtgcagcacg acatgcttgg
     3421 cgcaccccgt aaactgaacg gacaccttga tggtatgaaa gggtcatacc ttggaccgtc
     3481 gtttacgcaa ccggatatcg agcggcgatt gaccgagtcg aatgccgtct tttccgtgct
     3541 acaggatgac gacctgatcg aagccaccgt tggcgcactg acagaaggaa aggcggtcgg
     3601 ttggtttcag ggacgcatgg agttcggtcc gcgcgcactt ggtgctcgtt cgatcctcgg
     3661 agatccgcgc tcgccggata tgcagcgcac actgaacctc cgagttaagt accgcgagtc
     3721 gtttcgtccc ttcgctcccg ctgtgctgcg tgaggatgtc tccgagtggt tcgatctgga
     3781 ttccgactct ccctacatgc tgatcgtcgc cggtgtggcg gagcgtcatc ggcgtgccat
     3841 gaccccggag gaggacaaat tatttggcat cgacaagcta aatattccgc gtagttcgat
     3901 cccggcggta acacacgttg actattcggc gcgggtgcag accgtccatg aggagaccaa
     3961 tcctcaattc catctcttgc tgtcggcatt caagcgccac accggctgcc cggtcctggt
     4021 caataccagt ttcaacgtac gcggcgagcc gattgtctgt acgcccgagg acgcgttccg
     4081 ctgtttcatg ggaagcgaga tcgaagttct cgtggtcggc gactgttttc tccgtaagga
     4141 ggagcagacc gcgccgaagc tggattataa gtcggctttc gaactcgatt gacacggcgc
     4201 ggcggttcgc acgccgcgat tccatcattc ggcgggaacg atgacgtcca ccgactggac
     4261 gaccgccttc gacgtggccg gagtgggcgc ggcgttttcc acaatcaacg aaagcgggac
     4321 gtgacgcttc ggcaatggca acatgatggt gacacgaccg ccaatggggc caataaagac
     4381 gcgtgtcacg tatttcttca ttgtttcgtc cagcagaccg aagccgacat tgccctgttg
     4441 tacgtccgca atgacacgaa cccaaccttg attaaccagg gattcgggaa ctttcagcgg
     4501 caacgagccg ccaagcgccc actgctgggc tggcgggacg atcgtcaccg cggcggatga
     4561 aaaagtggtg cctccgccag gcgatccgga gacaaactcg tgcagatcgg cagcgcccgg
     4621 tacgatccgc gccgcggtga agtcagccgg cggaaccggc tcggactgct cggacgcagc
     4681 gatgtcaccg ataatcggac atatgggagc agttccatca ttggcgacca cccggacttc
     4741 atcgatctca atttcggaag ctaccgcctg gtccccgttt tggacgatca gggcaccact
     4801 ggccgcaaac gagggaattt tcagattgat aacgtctgat ctgtaagatt gggtgaccga
     4861 ctggcgtgtc acgaagccat cctctcgccg attgagtact cctatggaga ccgttccctt
     4921 tgaaaccctg gctttgatca ccacccaccc agccccggtc acgcaattct cgtacaaatt
     4981 aagccttccc gcatacgacc atggttgcgc cgaggtgcga atcgtttgcg tttcgcccga
     5041 gtttgtctgg accgcggccg ggttgaccaa cataatcgcc tgggtgggga tgacgcgtgc
     5101 gcggctcatc agctccgcgt tcggagcgca ctgtgggtgg acgaccaggc tttgcagtcc
     5161 gacagggtgc acgggggcac caactctcgc ctggatcctg gacaacagac cttgcgcaag
     5221 gtcgcgctgc agtaccggta tgaaatttcg cagcatgatc catgcctgca gacgtacgcc
     5281 ttcctgattg agatgataca tgtcggtaaa tagtctcggg tccaacgggt aagatgctgc
     5341 ttcgtccaac agcggaacgc cctgcgtctc cgcgagccga cgcagagcgc ggttctgcaa
     5401 tgtgatcagg cgtctgatat cggcggactg aagcggccaa aaggttgaat ccaattgctc
     5461 gatgatatgc gcgaagcgtg cgtcaccggg ctgctttacc tcgctgccat caagccatgg
     5521 caaggtggac atcgtgaagg gcacgccggc ggcgcgagca tcggaaatca tggtcctgac
     5581 gtcacgaatg aacactggaa gcccaagtgg gaggccagaa tcagccacgt tcggatggtc
     5641 ctcgttgaag tcctttggga acgcgagtgc gtaggttggc ttgggccgct ggtgttccat
     5701 tcgctccatg gtctgttgga aaaagccatt caccagagcg gctaaccggg aatgttccag
     5761 ccaccaaaca gagaacagcg tggcaggttt ccacctggtg tgcccagagc gctgcacctg
     5821 gatttgcgac ggcagaagac catcgaacga tacaagctga ttggcaccat cgtagaacac
     5881 cacatagtcg gggtgcagcg gcaatatctc ctgctccagg atcgccctca catcggttgt
     5941 accgattccc tcacgtccgg ag
//
LOCUS       DATAVD010000664         4587 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3599350, whole genome shotgun sequence.
ACCESSION   DATAVD010000664 DATAVD010000000
VERSION     DATAVD010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4587
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3599350"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..955
                     /locus_tag="VHX39_12480"
     CDS             <1..955
                     /locus_tag="VHX39_12480"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX3991978.1"
                     /translation="ICVAAHLDTVFPAGTDVKVRREGTKLFAPGIGDDTRSLAVLLAW
                     KRAMDAAAIETRADILFVADVGEEGSGDLRGVRHLFQRGRYKDRISAFITVDSPNMER
                     IVTGGVGSKRYRITFHAPGGHSYGAFGVVNPMFAMADAISRLGRVPVPTEPKTTYSAS
                     VTGGGTSINSIPNAVWTEFDLRSESIGELTALEERFLQIIDAAVAAENDIRSTRNGSV
                     TAEILPIGNRPAGHTSEAHELVQFAQAAINAKGYETRFEASSTDANIPMSLGIPAIRI
                     GSGGTGAREHSLDEWIDVEPDASLRGMEAGLATLLAVAGIV"
     gene            991..2241
                     /locus_tag="VHX39_12485"
     CDS             991..2241
                     /locus_tag="VHX39_12485"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3991979.1"
                     /translation="MKLMWFHLMPYTELPEDFKEKHPSVWVDTHSSLFDPKRAHLMYN
                     DFMDELEYAADLGYDAICVNEHHSNGYGLMPSPNLIASSLARRTSDATICVMGNSIAL
                     YNPPTRVAEEFAMLDVISGGRLIAGFPVGTPMDDCFAFGQNPSHLRDRYYEAHDLIMR
                     AWQDRETFAFNGRYNQQRYVNVWPRPIQQPHPPIWIPGGGSVETWQWCAEMDYVYCYL
                     SYYGHKAGQATMDGYWAEMDRLGKDRNPYRAAFAQTIAVAESRDQALELYTEAAEYFF
                     GRCLHFDPRFAAPPGYSTEATQRSGLSSQVSAAALRTVARPTAMNELVDAGYIVIGSP
                     KQVTEQMIELSENLNVGNLMLLMQFGNMNKQLTRYNSQLFAEKVMPELKKFYSEWEHR
                     WWPRPMDTKLRASIPAYAAPATSR"
     gene            2245..3435
                     /locus_tag="VHX39_12490"
     CDS             2245..3435
                     /locus_tag="VHX39_12490"
                     /inference="COORDINATES: protein motif:HMM:NF004834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3991980.1"
                     /translation="MQKTKCCIAGGGPAGMVLGLLLARAGIDVIVLEKHADFLRDFRG
                     DTIHPSTMEVLHELGLLSAFLKRPFTPTPRLGIQFGDETFEVADFSHLPVHCKFVAMM
                     PQWEFLNFIAETAQTYPSFRLMMQAEATDLTDDGEVTVRTSDTGVTKIKADLVIAADG
                     RHSTIRDAAGFKVSEFGAPIDVLWLRLSRRESDPTETLGRIVAGRMMITLNRGDYWQC
                     AYVIPKGGIAATQAAGLPAFRSVIAAIMPHFGHRVDELKSWDDVKLLSVAVDRLPEWS
                     RPGLLFIGDAAHAMSPIGGVGVNLAIQDAVATANILIPKLQMGSVTATDLRAVQRRRE
                     PPTVRTQRLQIFMQNNIISPALSGSGPIRPPFALRLMQWSPLLRRIPSRLIGMGFRPE
                     HVRR"
     gene            3470..3868
                     /locus_tag="VHX39_12495"
     CDS             3470..3868
                     /locus_tag="VHX39_12495"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX3991981.1"
                     /translation="MPRQQIISDRIGKPSGHFSQANAIEARGRIVFISGMTSKCADGT
                     IAGVGDIEAQTRQMCENVKAAVEAAGGTMADICRVDVYVKDMAGFDIIHRVRREYFPA
                     PPPASTMVAVSGFTHPDYLIEMAAIAVIPD"
     gene            3868..>4587
                     /locus_tag="VHX39_12500"
     CDS             3868..>4587
                     /locus_tag="VHX39_12500"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX3991982.1"
                     /translation="MDAVAHGRFVPPAPIPPPAPLPLREFLRAIRQNALTIWPEQAYR
                     DDMLVRQFLGRKNLLLNAPEAIHHVLVDNHANYRRSAASIRILRPITGDGLLLSMGEA
                     WRLQRRTVAPALAPRVIPLLCRHIMAATQEALHTLDQPNVDLLAFIQTLALDIAGRSM
                     FSLETRQYGPEIRRLLTEFGERLAQPHLLDMLLPASVPTIRDWQRARFSKRWMHLIET
                     MMQQRTSNPNPTGQPRDLLDLL"
BASE COUNT          912 a         1394 c         1371 g          910 t
ORIGIN      
        1 gatctgcgtc gcggcgcatc tcgatacggt gttccctgcc ggtaccgatg tgaaagtgcg
       61 tcgcgagggc acaaaactgt ttgcccccgg catcggtgat gacacaagaa gccttgcggt
      121 actgctggcc tggaagcggg cgatggatgc agcggcgatc gagaccaggg cagatattct
      181 gttcgttgcc gatgtgggcg aggaaggctc cggcgacctg cgcggcgtgc gacatttgtt
      241 ccagcgcggc cgttacaagg atcgcatcag tgcattcatc accgtggaca gtccgaacat
      301 ggaacggatc gtcaccggcg gagttggttc gaagcgctat cggatcacct tccacgcacc
      361 cggtggccat agttacggcg cgttcggtgt cgtcaacccg atgttcgcca tggccgacgc
      421 aatttctcga ctcggccggg tgccggtacc gactgagccg aagacgacct acagcgccag
      481 cgtgaccggc ggcggcacct cgatcaattc cattccgaac gccgtgtgga ccgagttcga
      541 tctgcgatcg gagtcaattg gcgagctgac agcactcgag gagcggtttc tgcaaatcat
      601 cgatgcagcg gtcgcggcgg agaacgatat acgttcgaca cggaatggtt cggtaacggc
      661 agaaatcttg ccaatcggca atcgcccggc cggccacacc agcgaagcgc atgagttggt
      721 gcagttcgcc caggcggcga tcaacgcgaa ggggtacgag acacggttcg aagcgtcatc
      781 caccgatgcc aacattccga tgagcctggg cattccggcg atcaggatcg gctccggcgg
      841 caccggcgca cgtgagcatt ccctggacga atggatcgac gtcgaaccgg atgccagctt
      901 gcgtggcatg gaggcaggac ttgccacatt gcttgcagtg gccggcatcg tgtaagaacc
      961 gaaccgagcc agacctggag tttccctgac atgaagctga tgtggtttca tctgatgcct
     1021 tacaccgagc tgccggaaga tttcaaggaa aagcacccgt cggtctgggt cgacacccac
     1081 tcgtcgttgt tcgacccgaa gcgggcgcat ctgatgtaca acgacttcat ggacgagctc
     1141 gaatacgccg ccgacctcgg ctacgacgcg atctgcgtca acgagcatca ttccaacggc
     1201 tatggcctga tgccgtctcc aaatttgatt gccagctcgt tggcacggcg gacctcggac
     1261 gcaacgattt gcgtgatggg caactcgatc gcgctgtaca accctccgac gcgcgtggcc
     1321 gaggaattcg ccatgctcga tgtgatctcg ggcggccggc tgatcgccgg cttcccggtc
     1381 ggcacgccga tggatgattg ttttgccttt ggtcaaaacc cgagccattt gcgcgaccgt
     1441 tactacgagg cccatgatct gatcatgcgc gcctggcaag atcgtgaaac cttcgcgttc
     1501 aacgggcgtt acaaccagca gcggtatgtg aacgtttggc cacgaccgat ccagcaaccg
     1561 catccgccga tctggatccc cggcggcggc tcggtcgaaa cgtggcagtg gtgcgcggag
     1621 atggattacg tctattgcta tctgtcatat tacggccata aggccggaca ggcgacgatg
     1681 gacgggtact gggccgaaat ggaccgcctt ggcaaggacc gcaaccctta tcgtgccgcc
     1741 ttcgcccaga ccattgcggt agcggaaagc cgcgaccagg cgttggagct gtataccgag
     1801 gccgccgagt atttcttcgg ccgctgcctg cactttgatc cgcggttcgc ggcgccgccg
     1861 ggttactcca ccgaggcgac gcagcgttct ggcctgagca gccaggtcag cgctgccgct
     1921 ttgcgtaccg tcgcacggcc aacggcgatg aacgagcttg tcgatgccgg ctatatcgtc
     1981 attggctcgc caaagcaggt gaccgaacag atgatcgaac tgtcggaaaa tctgaacgtc
     2041 ggcaacctga tgctgttgat gcagttcggc aacatgaaca agcaattgac ccgctacaac
     2101 agtcagctgt tcgcggaaaa agtcatgcca gaactgaaga aattttacag cgagtgggag
     2161 catcgctggt ggccacggcc gatggacacg aagctgcgtg ccagcatccc cgcctacgca
     2221 gcgccggcca cgtctcggta gccgatgcag aagacaaaat gctgcatcgc cggcggcggt
     2281 ccagccggaa tggtccttgg cctgctgttg gcacgtgccg gcattgacgt catcgtcctc
     2341 gagaaacacg cggacttctt gcgggacttc cgcggcgaca cgatccatcc ctccaccatg
     2401 gaggtgttgc acgaacttgg cctgctcagc gcttttctca aacgcccctt caccccaacg
     2461 ccccgactgg gaattcaatt cggtgacgag acgttcgagg tggcggattt ctcgcatctc
     2521 ccggtccact gcaaattcgt tgcgatgatg ccgcagtggg agtttctcaa tttcatcgcg
     2581 gagaccgcgc agacatatcc atcgtttcgt ctgatgatgc aggccgaggc gaccgacctg
     2641 acggatgatg gtgaagtaac ggtacgtact tctgacaccg gtgtaactaa aatcaaggcg
     2701 gacctggtga tcgcggcaga tggtcgccat tccaccatcc gcgacgcggc cgggttcaaa
     2761 gtttcggaat tcggtgcgcc gatcgacgtg ctttggctgc gcctgtctcg ccgagagtcg
     2821 gatccaactg aaactcttgg acgaatcgtg gcaggccgca tgatgatcac actgaaccgc
     2881 ggcgactatt ggcaatgtgc ttatgtcatc ccaaagggcg gaattgcggc aactcaggcc
     2941 gccggcctgc cggcgtttcg gtccgttatt gctgcgatca tgccgcactt cggccaccgg
     3001 gttgacgaac tgaagtcctg ggacgatgtc aaattgctgt ccgtcgcggt cgatcgcctc
     3061 ccggaatgga gtcgacctgg acttttgttc attggcgatg cggcccatgc catgtcgccg
     3121 attggcggag tcggggtaaa tctcgcaatc caggacgccg tcgccactgc caacattctg
     3181 ataccgaaac tgcaaatggg ttctgtcaca gcgacggacc tgcgcgcggt gcaacggcgg
     3241 cgtgaaccac cgacggtccg tacccagcgc ttgcagattt tcatgcaaaa caacattatc
     3301 tccccggcac tttctgggtc gggcccaatc cgtccgccct tcgcgctccg gctcatgcaa
     3361 tggtcgcctt tattgcgtcg catcccctcg cgtctcatcg gcatgggctt ccggccggag
     3421 cacgttcgcc gctaaaatcc tccggtggac gttcacgagg agaccaccta tgccacgtca
     3481 gcagatcatc tccgacagga tcggcaagcc cagtggccat ttttcgcagg ccaacgcgat
     3541 cgaggcacgc ggacggatcg tgttcatttc gggcatgacc tcgaaatgcg ccgacgggac
     3601 gatcgccggc gtgggcgata tcgaagcaca aacccggcaa atgtgcgaaa acgtcaaagc
     3661 tgcggtggaa gcggccggcg gcacaatggc cgatatttgc cgcgtggacg tctatgtgaa
     3721 ggatatggcc ggattcgaca tcattcaccg ggtccggcgg gagtatttcc ccgctccgcc
     3781 gccggcctct acaatggtcg cagtcagcgg tttcacgcat cccgattacc tcattgaaat
     3841 ggccgcaatt gccgtgatcc ccgactgatg gacgcggttg cgcacggacg atttgtgccg
     3901 ccggcgccaa tcccgccgcc ggcgccgctg ccgttgcgcg aattccttcg agcgatccgg
     3961 caaaacgcac tgaccatctg gcccgagcag gcctaccgcg atgacatgct ggtgcggcag
     4021 ttcctcggcc gaaagaacct actgctcaat gcgcctgagg cgatccatca cgtgttggtc
     4081 gacaatcacg cgaactatcg gcggtcggcc gcctcgatcc gcattttgcg gccgatcacc
     4141 ggcgacgggc tgctgctcag catgggtgag gcatggcggc tgcaacgccg cactgtcgcc
     4201 ccggcattgg cgcccagggt gataccgtta ctttgccgtc atattatggc ggcaacgcag
     4261 gaggcattgc acacgctgga tcagccgaac gtcgaccttt tggccttcat ccagacgctg
     4321 gctttggata tcgccggccg ctcgatgttc tcattggaaa ccaggcaata tggcccggag
     4381 atacggcgtc tgttgaccga gttcggcgag cggttggccc agccgcatct gctcgacatg
     4441 ctgttgcccg cctcggtccc gacaatacgc gattggcagc gcgcccgctt cagcaaacgc
     4501 tggatgcatc ttatcgagac aatgatgcaa caacgcacca gcaaccctaa cccgaccggc
     4561 caaccccggg atttgctgga cttgttg
//
LOCUS       DATAVD010000665         4544 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_62148, whole genome shotgun sequence.
ACCESSION   DATAVD010000665 DATAVD010000000
VERSION     DATAVD010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4544
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62148"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..1010
                     /gene="trxB"
                     /locus_tag="VHX39_12505"
     CDS             30..1010
                     /gene="trxB"
                     /locus_tag="VHX39_12505"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEX3991983.1"
                     /translation="MSQTHPTPTHHTKVLIIGAGPAGYTAAVYAARANLAPILVAGLQ
                     PGGQLMITTDVENYPGFADVIQGPWLMEQMEAQATHVGTTIIHDLITSVDLSKRPFRC
                     QGDSGDLYTADSIIIATGAQARWLGLASEQTLQGRGVSACATCDGFFYRGRRVVVVGG
                     GNTAVEEALYLTHHADKVTLVHRRDQLRAEAILQERLFANPKISVVWNKVVKQIIGGG
                     SPEVVTGLRVTDTQTGSDSDLELDGVFVAIGHTPNTEIFRNQLTMDREGYIQTAPGTT
                     RTSVPGVFAAGDVQDKIYRQAVTAAGTGCMAALDAEKFLAEAETIPALAV"
     gene            1122..2006
                     /locus_tag="VHX39_12510"
     CDS             1122..2006
                     /locus_tag="VHX39_12510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014104779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3991984.1"
                     /translation="MDWDKLRVFHAVAEAGSFTHAGDTLNLSQSAVSRQISALEEALQ
                     VPLFHRHARGLILTEQGESLNRTVREVFAKLAITEALLTESKEKPAGRLKVTTTHGFG
                     ALWLAPRLHVFLDAYPEVMVLLLLDDAELDLAMREADVAVRMHAPKQPDLIQRHLMTM
                     NWNICASPEYLKKNGVPKRPEELDAHRLILFGHHHMPVPDINWLAELGRRPGSPRRAV
                     LEVNSLQAILLAIRAGAGIGAVPDYAMAENTDLVKIMTDLKGPKIDVFFVYPEELRNS
                     KRVAVFRDFLLARLAEFH"
     gene            complement(2911..3921)
                     /locus_tag="VHX39_12515"
     CDS             complement(2911..3921)
                     /locus_tag="VHX39_12515"
                     /inference="COORDINATES: protein motif:HMM:NF012377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase family glycosylhydrolase"
                     /protein_id="HEX3991985.1"
                     /translation="MAVLQRGINITGWFRYPASRDPAVLSRWLSDPAMADLKRAGFTF
                     VRLAVDPAIIDGPAMRGLLVDQVRRLQRQGLAVIVSPHPVSWNLDQNLSDRSRLAEFW
                     HDLAPALRGLPPAQTFPEVLNEPVFHDDPTDWWTLQNTLHIAIRTALPDNTIILTGQD
                     WGSISGLLTLIPDPEDLNVVYSFHFYDPAELTSLAAYRPSLDRDALARLPFPEANPAN
                     CQQTARSARDAATRDLMAFYCATGWDAARVRARLQDAVSWSRRYGVALLAGEFGASAS
                     LNPTARLAWLQLVRETCVENRISWALWGYDDVMGFGVRRPPENRPQLDRSVLAALGLQ
                     VP"
     gene            complement(4143..>4544)
                     /locus_tag="VHX39_12520"
     CDS             complement(4143..>4544)
                     /locus_tag="VHX39_12520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019088293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3991986.1"
                     /translation="WVGFPSCAVAYDRAPRHAGATKWNYWKLWNLALEGITSFTVMPL
                     KIATYLGLAVALLSVAFGAQVIVKTLIFGNPVAGYPSLMTVMLFLGGVQLMTLGVMGE
                     YLGRVFNETKQRPLYLVERFLPSRVRATAAE"
BASE COUNT          831 a         1494 c         1408 g          811 t
ORIGIN      
        1 ccggcgcaag cgcaccgata tgttgaggca tgagccagac gcatcccacc cccacgcacc
       61 ataccaaggt tttgatcatc ggcgccggcc ccgccggcta caccgccgcc gtttacgccg
      121 cccgcgccaa cctcgccccc attctggtgg ccggcctgca gcccggcggc cagctcatga
      181 tcaccaccga cgtcgagaac taccccggtt tcgccgacgt catccaaggt ccctggctga
      241 tggagcagat ggaggcccag gctacccatg tcggcaccac catcatccac gacctgatca
      301 ccagcgtgga tctttccaaa agaccgttcc gctgccaggg cgactcgggc gacctctaca
      361 ccgccgactc catcatcatc gccaccggcg cccaggcccg ctggctcggt ctcgcctccg
      421 aacagacctt gcaaggccgc ggcgtctccg cctgcgccac ctgcgacggg ttcttctacc
      481 gcggccggcg cgtcgtggtg gtcggcggcg gcaacaccgc ggtggaggag gcgctctatc
      541 tcacccacca cgccgacaaa gtgaccctgg tgcatcgccg cgatcagctg cgcgccgagg
      601 cgatcctgca ggaacggctg ttcgccaacc cgaagatctc tgtcgtctgg aacaaggtgg
      661 tgaaacagat aatcggcggc ggctcccccg aggtggtgac cggcctccgc gtcaccgaca
      721 cccagaccgg ctccgacagc gacctggaac tcgacggcgt gttcgtcgcc atcggccata
      781 ccccgaacac cgaaattttt cgaaatcagc tgaccatgga ccgcgaaggc tacatccaga
      841 ccgcgccagg aaccacccgg acctcggtcc ccggcgtgtt tgccgcgggt gacgtgcagg
      901 acaaaatcta ccgtcaggcg gtcacggccg ccggcaccgg ctgcatggcg gcactcgatg
      961 cggaaaaatt cctcgccgag gccgaaacca tcccggcact cgcggtgtaa caaacaacgc
     1021 ttgccgattg cccgcatctg gccgaagcta ccaggcggta ccgcggaaac gttcagacca
     1081 gcgaccggaa tccgttccgg cgcacgggag aggccgagac gatggactgg gacaagctac
     1141 gcgttttcca cgcggtggcc gaggcaggca gcttcacgca cgccggtgat acgctcaacc
     1201 tgagccagtc cgctgtctca cgccagatct ccgcgctgga agaggcattg caggtcccgc
     1261 tgttccaccg ccacgcccgt ggcctgatcc tgaccgagca gggcgaatcg ctcaaccgca
     1321 ccgttcgcga agtgttcgcc aagctggcca ttaccgaggc cttgctgacc gaaagcaagg
     1381 aaaagcctgc cggacggctg aaagtcacca ccacgcacgg gttcggcgcg ttatggctgg
     1441 cgccccggct gcatgttttc ctcgacgcct atcccgaggt catggttctg ctgctgctgg
     1501 atgacgccga actcgatctg gcgatgcgcg aggccgatgt cgccgtccgc atgcacgccc
     1561 cgaaacagcc cgacctgatc cagcgccatc tgatgacgat gaactggaat atctgcgcct
     1621 cgcccgagta tttgaagaag aacggcgtgc cgaagcggcc cgaggaactg gatgcccacc
     1681 gcctgatcct gttcggccac caccacatgc cggtacccga catcaactgg ctggccgagt
     1741 tgggccgccg gccgggcagt cctcggcgcg cggtactgga ggtgaacagt ctccaggcga
     1801 tcctgctggc catccgcgcc ggcgccggga ttggcgcggt gccggattat gccatggcgg
     1861 agaacaccga tctcgtgaag atcatgacgg acctgaaggg gcccaagatc gacgtgttct
     1921 tcgtgtatcc ggaggagctg cggaactcca agcgagtcgc ggtgttccgc gatttcctgc
     1981 tggcccgcct cgccgagttc cactgagccg cccgaaccgg cccctggatc gcatccagac
     2041 cgagcgttcc acgcgaaccg accggtatcg gcagtgtgtc gcgaattgcc gcgccggttt
     2101 ccgacaggtc catgatcgtt gcattttgtg gtgcctgacc ggccatgctg atccggcatg
     2161 ataggttcac cgcaaaacgt tgcacgttgc ggcgctcgac caccgaggtt gaggtgcgaa
     2221 cgacgcggac cacggcctgc ttcaggtccc gcatcgccgc atccaatact gctgagttat
     2281 cgcgcacttc ggcagcgtgg cgcccggttt gttctgctgc ggtggccacc tcggcggtgc
     2341 gtgcggacat ttcggaggcg gctgacgctg tctcggttac gtttcgggcg atttcggcag
     2401 tcgctgatcc ttgctgctcc acagctgcgg cgatcgagct tgcaatcgtg ttgactgctc
     2461 cgatggtctg ctcgatgcgg gcgacggctt ccatggcttc gcccgtcgcg acccgcactt
     2521 cgttgatgtg gcgggcgcag gcagcccccg gacagagcac agcgccactg cgggatccgg
     2581 gggtgcgcca gcggttacgt cgtcccattg tcacaatatt gttactcgct tgcgtgaatg
     2641 accctacgga tggagttgcc atgcatattc agcatggcgg cgtccggctt ttcgcgatgg
     2701 ccatgcgagc ccaggaggtc tagttagttt tgcaccgaat acggcgttgc catcgacgtg
     2761 aaacttaaat tttcgcgtgc aactttgcag atggtgtcgt cagagttcca acccgcgtgg
     2821 ttggaaaggg gtctttggcc cctgcgtctc ccagacgtga agcctccctg tatacttaac
     2881 ccctggcctg acggccgggg gttttttctt ttatggcact tgcaatccta gtgctgcgag
     2941 tacggaacga tccagttgcg gtctgttttc cggcggccgt cgtacgccga accccattac
     3001 gtcatcatac ccccataatg cccaggagat cctgttttca acacaggttt cccgcaccag
     3061 ctgcagccag gccagcctcg cagtgggatt gagtgaggca ctggcgccga actcgccggc
     3121 cagcagcgcc acgccgtatc gccgggacca ggagacggca tcctgcagac gggcgcggac
     3181 acgggccgca tcccaaccgg tcgcgcaata gaacgccatg aggtcgcgcg tggcggcgtc
     3241 gcgcgcgcta cgggcggttt gttgacagtt tgccggattt gcctcgggaa acggcagccg
     3301 cgcgagtgcg tcgcggtcca ggctcggacg ataagcggcg agcgaggtca gctcggccgg
     3361 gtcgtagaag tggaaactgt agaccacgtt cagatcctcc gggtccggga tcagggtcag
     3421 cagcccggag atactgcccc agtcctggcc ggtcaggatg atcgtgttgt ccggtaaggc
     3481 tgttcggatc gcgatatgca gggtgttttg gagggtccac cagtcggtcg gatcgtcgtg
     3541 gaagaccggt tcgttcagca cctcggggaa ggtctgggcg ggcggaagac cgcgcagggc
     3601 aggggccaga tcgtgccaga actctgccag ccgggagcgg tcactcaggt tctggtccag
     3661 gttccaactg accgggtgag gcgaaacgat caccgcgagg ccctggcgtt gcagccgccg
     3721 cacctgatca accagcagac cccgcatcgc cggtccgtca ataatggcgg gatccaccgc
     3781 cagacgcacg aaggtgaacc cggcgcgttt cagatccgcc attgccgggt cgctgagcca
     3841 ccggctcagc acggccggat cgcggctggc gggatagcgg aaccagccgg tgatgttgat
     3901 gccacgctgc agtaccgcca tccggtccga cggtggtatg gccaagcagc tctgggcatg
     3961 gagcagcagc gccaggagaa aggttaggcc ccatactgga ccccgcacta cctgtctaaa
     4021 tgagtggttc caaggctcga ccctgcgaag gcgggggccg ctgcccttgg cggggttccg
     4081 aggggcagcg ccccttggtg gcgtgcggtg tgcactttgt tggcaaagcc caggcacctg
     4141 cctcactctg ccgccgtggc gcgcacgcgg cttggcagga accgctccac caaatacagc
     4201 ggccgctgtt tcgtttcatt gaagactcgg cccagatatt cgcccatcac ccccagggtc
     4261 atcaactgga cgccgccgag gaacagcatc accgtcatca ggctcggata accggcgaca
     4321 ggattgccaa aaatcaacgt tttcacgatg acctgggcgc caaacgcgac cgacagcagc
     4381 gccacagcca gcccgagata ggtggcgatc ttcaacggca tcacggtgaa gctggtaatg
     4441 ccctctaacg cgaggttcca aagtttccag taattccatt ttgttgcccc ggcgtggcgc
     4501 ggcgcgcgat cataggccac cgcgcagctt gggaagccga ccca
//
LOCUS       DATAVD010000666         4991 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1551455, whole genome shotgun sequence.
ACCESSION   DATAVD010000666 DATAVD010000000
VERSION     DATAVD010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4991
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1551455"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..349
                     /locus_tag="VHX39_12525"
     CDS             <1..349
                     /locus_tag="VHX39_12525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DsrE/DsrF/DrsH-like family protein"
                     /protein_id="HEX3991987.1"
                     /translation="SGSHDRAHYAFVLAAGAAALGRQVVLFASNRGCLGLARDWSGLN
                     DAERDTRVQAAGVAGLDELREASVELGVRLIACEAGLRAEGIDPASLLPTVEIAGVAT
                     FLSEVGGGQVISL"
     gene            complement(404..1030)
                     /gene="gmk"
                     /locus_tag="VHX39_12530"
     CDS             complement(404..1030)
                     /gene="gmk"
                     /locus_tag="VHX39_12530"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018308252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEX3991988.1"
                     /translation="MTEIARRGVGLVLCAPSGGGKGAITEALLAQEPALRRSVSVTTR
                     AARPGEVDGVHYRFVSADTFAAMERNGELLEWARVLRGTHGYGTPRGPVEAALAAGED
                     MLFDIDWQGFRQLRDRLPNDVVGVFVLPPGLDVLEQRLRARGDDPPEVDRRMRQAREE
                     ISHWQEFDFVVINDELDRAVEQVGCILRAARLVTARQLGLQAFVAGMQ"
     gene            complement(1027..1917)
                     /locus_tag="VHX39_12535"
     CDS             complement(1027..1917)
                     /locus_tag="VHX39_12535"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HEX3991989.1"
                     /translation="MPYSLASMTGFARTEGTIETLTWAWELRAVNGRGLELRFRLPPG
                     WDALEQGYREMVGKVLKRGNINANLTVRRDMETRASIDEAALANVMTLAMDLHRRIPG
                     SPVPRAESLLTMPGVMRQAPADPAQERDLAAPAVQAGFAQALSRLVAARAAEGARLAA
                     VMSGQLDDIARLRDQAEAEAADQPAAHQARVMETLRSLLRESPSLPEERIAQEVALLA
                     ARSDVREELDRLAAHIAAARALMEEAVNIGRRFDFLVQEFNREANTLCSKSASVALTG
                     TGLKLKATIEQLREQVQNIE"
     gene            1916..2665
                     /locus_tag="VHX39_12540"
     CDS             1916..2665
                     /locus_tag="VHX39_12540"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HEX3991990.1"
                     /translation="MAAVLSATQRRAESPNPRTGDSEIVTLPSGTARVEWRRNARARR
                     VSLRINPSDGAIVVTLPLRASRRAGMALLMGHADWVARRIAALPAAVTLADGAEVPIG
                     GVPHLIRHHPERHGGAWLEDRELHVTGRPEFLPRRAIDFLRAEAGRRLSALVRAKASQ
                     AGVTATRITIKDTTSRWGSCAPDGALAFSWRLVMAPEFVQDYVTAHEVAHLRHMNHGP
                     AFWHLVSSLTAHMPRAMAWLNHEGPRLLRVG"
     gene            complement(2669..3067)
                     /locus_tag="VHX39_12545"
     CDS             complement(2669..3067)
                     /locus_tag="VHX39_12545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991991.1"
                     /translation="MLRIKLNQQLLHETIGLGAQAGVAAGRYQRQREFIDIYRMNGKI
                     LIDDGKVPYFAIGRLNLYQELSDAMRKTNISAEDLPTVVDALVNRIPLLTWEDNLPKG
                     ITSALRNQNVVKVLKSGQLWTEPGEVQLGY"
     gene            3383..4474
                     /locus_tag="VHX39_12550"
     CDS             3383..4474
                     /locus_tag="VHX39_12550"
                     /inference="COORDINATES: protein motif:HMM:NF013832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991992.1"
                     /translation="MTTNSINHTPWWAWAGPLAACLVLAAKFTHLVPADAPAVLVAAS
                     LLLLASVFAAVHHAEIVALRVGEPAGSIVLAIAVTVIEVALIVSMMLAASDGGSSLAR
                     DTVFAAVMLVLNGVVGVCLLCGGARHHEQSFQEQGASSALSVLGTLATIALIVPNYTV
                     AAPGPAYAPAQLGFVGVVSLLLYGVFLFVQTVRHRDYFRTGVDSGGDHSRPGARTTAV
                     SVVLLIVALVAVVLLAKTLSPTLEQGVAAAGFPPAFVGVVIAALVLLPEGTAAVLAAR
                     SNKLQTSLNLALGSALASIGLTIPAVAVVSLWLGQPLHLGLAPEAMTLLILTLFISTV
                     TLATGRTTILQGAVHLVICGVFLLLSAVP"
     gene            complement(4476..>4991)
                     /locus_tag="VHX39_12555"
     CDS             complement(4476..>4991)
                     /locus_tag="VHX39_12555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3991993.1"
                     /translation="HLRQQFRDAVLFTHRGLSGPAILQISSYWREGPIILNLLPDLDA
                     SAFLLDRKRTRPKAELRTVLAEQLPQRLAHALAPDNQRLADMQDRTLRLLAQQLQAWT
                     ITPTGTEGFAKAEVTAGGIDTSELSSKTMQSTKVPGLFVIGEAVDVTGWLGGYNFQWA
                     WASGWCAGEAA"
BASE COUNT          853 a         1579 c         1583 g          976 t
ORIGIN      
        1 gtcgggcagc catgatcgcg cacactatgc gttcgtgctt gccgccggtg ccgcggcact
       61 cggtcgccag gtcgtgctgt tcgccagcaa ccggggttgt ctgggcctgg cgcgggactg
      121 gtccggactg aacgacgccg agcgcgatac gcgggttcag gctgccggcg ttgcagggtt
      181 ggacgagttg cgggaggcat cggtcgagct cggcgtgcgg ttgatcgcgt gtgaggctgg
      241 cttgcgagcg gaaggaatcg atccggcgtc gttactgcca accgtcgaaa ttgccggggt
      301 ggcgacgttt ttgtcggagg taggcggcgg ccaggttatt tctttgtagg aacgtaatcc
      361 gaggtggccg ggtcaggctc ggccatgacg gaaaagacgg ctctcactgc atcccagcta
      421 caaacgcctg caatcccaac tgcctcgccg tcaccaaccg tgcggcgcgc aagatacaac
      481 ccacctgttc gaccgcgcga tccaattcgt cgttgatgac aacgaaatcg aattcttgcc
      541 agtgcgagat ttcctcgcgc gcctgccgca tccgccggtc gacctccggc gggtcgtcgc
      601 cacgcgcgcg cagccgttgc tccagcacat cgagcccggg aggcagaacg aagacgccaa
      661 cgacgtcgtt cggcaaccga tcgcgcaatt gccgaaaccc ctgccagtcg atatcgaaca
      721 gcatgtcctc gcctgccgcc agcgccgctt caacgggccc gcgcggcgtt ccgtagccgt
      781 gcgtaccgcg cagcacccgg gcccattcca acagttcgcc gttgcgttcc atcgccgcaa
      841 atgtgtcagc actgacgaac cggtagtgca cgccgtccac ctcacctggc cgagccgctc
      901 gtgtggtcac gctaacggaa cggcgcagcg ccggttcctg tgccaacaac gcctcagtaa
      961 tcgcgccctt gccaccaccc gaaggagcac acagcacaag gcccacaccg cggcgagcaa
     1021 tctcggtcat tcgatgttct gcacctgctc gcgcaattgc tcgatcgtgg ctttcaactt
     1081 caatccggtg ccggtcagcg ccaccgacgc tgacttgctg cacagcgtgt tggcttcacg
     1141 attgaactcc tgcaccagga agtcgaagcg gcggccgata ttgaccgcct cctccatcag
     1201 cgcccgcgca gctgcgatat gcgctgccaa ccggtccagc tcctcccgca catccgaccg
     1261 agccgccaac aacgcaacct cctgggcgat ccgttcctcg ggcaacgatg gagattcgcg
     1321 caacagcgag cgcaacgttt ccatcacccg tgcctgatgc gcggcgggct gatcggctgc
     1381 ctccgcttcc gcctgatcgc gcaggcgggc gatgtcgtcc aactgacctg acatgaccgc
     1441 ggccagccgc gccccctcgg cggcacgagc ggcgaccaat ctggacaacg cctgcgcaaa
     1501 tcccgcctgc acggcaggtg ccgcaagatc tcgttcctga gccggatcgg ccggagcctg
     1561 acgcatcaca ccgggcatgg tcagcagcga ctcggcgcgc ggtactgggc tgcccggaat
     1621 gcggcgatgc agatccattg caagagtcat gacattcgcc aacgctgcct catctatcga
     1681 agcccgcgtt tccatgtccc gccgcaccgt cagattcgca ttgatgttgc cgcgttttag
     1741 cactttgccg accatctcgc ggtagccttg ctctagcgcg tcccatcccg gaggcaggcg
     1801 gaagcgcagc tccagtccgc gaccgttgac ggcgcggagt tcccaggccc atgtcagtgt
     1861 ttcaatggtg ccctcggtcc gggcgaatcc agtcatggag gcgagtgaat acggcatggc
     1921 ggccgttcta tcagccacac agcggcgcgc cgagtcccca aacccgagga ccggcgactc
     1981 ggagatcgtc accctcccgt cgggcacggc ccgggtggaa tggcgacgca acgcccgcgc
     2041 gcgtcgtgtc agcctgcgta tcaatccgag cgatggtgcg atcgtcgtta cgttgccgct
     2101 ccgggccagt cggcgggccg ggatggcttt gttgatgggc catgcggact gggtcgcccg
     2161 gcgtatcgct gcgctgcctg ctgcggtgac cctggcggac ggcgccgagg tgccgatcgg
     2221 tggcgttccg cacctcatcc gccaccatcc cgaacgacat ggtggcgcgt ggctggaaga
     2281 ccgcgaattg cacgtcaccg gccggcccga gttcctgccg cggcgggcga tcgatttcct
     2341 gcgtgccgag gcgggccgcc gactgtccgc tctggtgcgc gccaaggcca gccaggccgg
     2401 tgttacggca acgcggatca ccatcaagga caccaccagc cgttggggca gctgtgcgcc
     2461 tgacggagcg ctggcgttca gctggcggct ggtgatggcg ccagagtttg tccaggacta
     2521 cgtcaccgcg cacgaggtcg cgcatctgcg ccacatgaac catggcccgg cattctggca
     2581 cctcgtatcg tcgctgacgg cgcacatgcc tcgggcgatg gcctggctga accacgaagg
     2641 gccgagactg ttacgagtgg gttgaaggtc agtagcccaa ctggacttcg cctggctcgg
     2701 tccacaattg gccactctta aggaccttga cgacgttttg gttcctgagc gccgaagtga
     2761 tgccctttgg caggttgtcc tcccaggtca acagcggaat gcgattgaca agggcatcca
     2821 ccacagtcgg caaatcctct gcactgatgt tggtctttcg catggcatcg gatagctcct
     2881 gatacaaatt gaggcgtccg atcgcgaaat aggggacttt gccatcatcg atgaggattt
     2941 tgccattcat ccggtaaata tcaatgaatt cgcgctgccg ttgataacgg ccggcagcga
     3001 cgcccgcctg tgcaccaagc ccaatcgttt cgtgcaacag ctgttggttc agcttaatgc
     3061 gcagcatatt atgcgagcaa ttgacgacga aggagagttc gtcgtcccag tgcgccccgc
     3121 accatcgcga aaaacaccat actgtcgacg agaatcacgc ggtcgtcgtt ataatcgggg
     3181 tggcgtttga ctcgatcata ccatgccggc actcgcatca tcggctggat cctctcagct
     3241 gcacagcggg tacggcggtc ataaatggaa cagtggcgcc ggaagtcaaa ttcaattcgt
     3301 ctgccgaacg tcaacgccat cgcgtataag ttggctcctg gatcatgcac gaaacgccca
     3361 attcgtgata cgagccacca ccatgaccac taactccatc aaccacactc cgtggtgggc
     3421 ctgggcggga ccactcgccg cctgtctggt actggccgcg aaattcactc atctggtacc
     3481 ggccgatgcg cccgcggtgc tggtcgcagc ctctttgttg ctactggcgt cggtgttcgc
     3541 agccgtgcac cacgccgaga tcgtcgcctt gcgggtgggc gagccggccg gctcgatcgt
     3601 cctggccatc gctgtcactg tgatcgaggt tgcgctgatc gtttcgatga tgttggctgc
     3661 cagcgacggc ggtagctcgt tggcacggga caccgtgttc gccgcagtga tgctggtgct
     3721 gaacggcgtg gtcggtgtgt gcctgttatg tggcggcgcg cggcatcatg agcagagctt
     3781 ccaggaacaa ggcgcgtcct cggcgttgag cgtactgggc actctggcga ccatcgcact
     3841 gatcgtgccg aactataccg ttgctgctcc gggcccggcc tatgcacccg cgcaactggg
     3901 gttcgtgggc gtcgtgtcgc tgctgctgta tggcgtgttc ttattcgtgc agacggttcg
     3961 gcatcgggat tatttcagaa ccggtgtaga ctccggcggc gaccattcaa ggccaggcgc
     4021 acgcacgacc gcggtgagcg tggtgttgct gatcgtggcc ctcgtcgcag tcgtgctgct
     4081 ggcgaaaacg ctgtcgccaa cgctggagca aggcgttgcc gctgcggggt ttccccccgc
     4141 gttcgtcggc gtggtgatcg cggctctcgt gctgctgccc gagggcacgg cggcggtcct
     4201 ggcggcgcga tcgaacaaat tacagaccag tttgaacctc gcgttgggat ccgcgttggc
     4261 gagtattgga ttgaccattc cggcagtcgc cgtcgtgtcg ctttggttgg gtcagccgct
     4321 gcatttgggc ctcgcgcccg aggcaatgac cctgctgatc ctgacgttgt ttatcagcac
     4381 tgtgacgctg gcgaccggcc ggacgacgat cttgcaaggg gcggtgcatt tggtgatctg
     4441 cggggtgttt ttgttgctgt cggcggtgcc gtgaatcacg ctgcctcgcc ggcgcaccag
     4501 ccgctggccc aggcccattg gaagttatag ccgccgagcc aaccggtgac gtcaaccgcc
     4561 tcgccaatga caaacaggcc ggggactttt gtggattgca tggttttcga tgacagctcg
     4621 cttgtgtcga tcccgccggc ggtgacctcg gccttggcga aaccctcggt gccggttggg
     4681 gtgatggtcc acgcctgcag ttgttgtgcg agtaagcgca acgtacggtc ctgcatatct
     4741 gccagccgct gattgtctgg cgccagggca tgggccagtc gttgcggcag ttgctcggcc
     4801 agaacggtgc gaagttcggc tttcgggcgt gtgcgcttgc ggtccagaag aaatgcggac
     4861 gcgtcgaggt ccggcagcag gttgaggatg atgggtccct cgcgccaata ggatgagatt
     4921 tgcaagatcg ccggaccgga cagcccgcgg tgggtgaaca gcacggcatc gcgaaactgc
     4981 tggcggaggt g
//
LOCUS       DATAVD010000667         2663 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3599850, whole genome shotgun sequence.
ACCESSION   DATAVD010000667 DATAVD010000000
VERSION     DATAVD010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2663
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3599850"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..949
                     /locus_tag="VHX39_12560"
     CDS             <1..949
                     /locus_tag="VHX39_12560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008495491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thiolase domain-containing protein"
                     /protein_id="HEX3991994.1"
                     /translation="RPITRYENACASGSAAIHGARDFLLSGRGKFALVIGVEKMTATP
                     GKEVGDILLKASYQKEEADIPAGFAGVFGRIADKYFQRHGDQSDALAAIAAKNHKNGV
                     DNPWAQMRRDLGYDFCRNVSEKNPYVAPPLKRTDCSLVSDGAAALILADEDTARAMGK
                     AVRFRAAVQVNDFLPISKRDITLFEGAAQAWQQALAAADVKLQDLSFVESHDCFTIAE
                     LIEYEAMGLTPPGQGARAVLEGWTQKDGKLPINPSGGLKAKGHPIGATGVSMHAITAM
                     QLTGQAPEGMQLPKAELGGVFNMGGAAVANYVSILEPFR"
     gene            964..2478
                     /locus_tag="VHX39_12565"
     CDS             964..2478
                     /locus_tag="VHX39_12565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HEX3991995.1"
                     /translation="MAHLLIQTARRFPDRPALIWRDTTWTWAEFNARVQAAAGALAAR
                     GVRHGDRVLLHARNSNAVLESMFATWMLGAVWVPTNFRLTPPEVAYLATSSGASVHIF
                     DSAFPEHAAAAKTENPSCRLEVSIGEDWETLATETGKITRPADVDRDHPAWFFYTSGT
                     TGQPKAGVLTHGQLEYVICNHLCDLMPATTENDVSLVVAPLSHGAGIHALPQVARGAA
                     TVLLPSERFDVAEAWRLVEQHRVSNMFTVPTILTMLTRHEAVDRYDHSSLRYVIYAGA
                     PMYRADQIQALEKLGPVLVQYFGMGEVTGNITVLPPSCHTLNDAVMPIGSCGFPRTGM
                     DVTILDEVGTHLPPGTTGEICVRGPGVFAGYHNNPAATEKATAFGWFHTGDLGHMDTR
                     GFVYITGRASDMYISGGSNVYPREIEEVLLTHPAVAEVCVVGMPHEKWGETGVAVLVL
                     NEGMTVTEHMLAAHIEGKLARYKHPASFVIWPELPKSGYGKVVKRDVRRLLEET"
     gene            2475..>2663
                     /locus_tag="VHX39_12570"
     CDS             2475..>2663
                     /locus_tag="VHX39_12570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003618779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DOPA 4,5-dioxygenase family protein"
                     /protein_id="HEX3991996.1"
                     /translation="MIEPTRIQGYHAHIYYDALSRPHAAELREVVEQRFDVRMGRWHD
                     VPVGPHPCAMYQIAFENDQ"
BASE COUNT          519 a          793 c          834 g          517 t
ORIGIN      
        1 ccggccgatc acgcgatatg agaatgcctg cgcctccggc tcggccgcca ttcacggtgc
       61 gcgcgatttc ctgctcagcg gccgcggcaa gtttgccctg gtgatcgggg tcgagaagat
      121 gacggcaacc ccgggcaagg aggttggcga catcctgctc aaggccagtt accaaaagga
      181 ggaagccgat atccccgcag gcttcgccgg cgtgttcggc cgcatcgccg acaaatattt
      241 tcagcgtcac ggcgatcagt cggacgctct ggccgcaatc gccgccaaga accacaaaaa
      301 tggcgtcgat aatccctggg cgcaaatgcg tcgcgatctg ggatacgact tctgccgtaa
      361 cgtgtcggag aagaaccctt acgtggcgcc gccgttgaag cgcaccgatt gctcgctggt
      421 gtccgatggc gcggctgcac tgatccttgc ggacgaggat accgcgcgtg ccatgggcaa
      481 ggcggtacgg ttcagagccg ccgttcaggt caacgatttc ctgcccatca gcaagcgcga
      541 cattacattg ttcgagggcg cggcacaggc gtggcaacag gcgttggcgg cagctgatgt
      601 gaagttgcag gatttgtcgt tcgttgaatc gcacgattgc ttcaccattg ccgaactgat
      661 cgagtacgag gcgatgggcc tgacaccacc aggtcagggg gctcgcgcgg tgctggaggg
      721 ctggacgcaa aaggatggca aattgccgat caacccatcc ggcggattga aggcgaaagg
      781 tcatccgatt ggcgcaaccg gcgtgtcgat gcatgcgatt acggcaatgc aactgaccgg
      841 ccaggcaccg gaaggcatgc aactgcccaa ggccgaactt ggcggcgtct tcaacatggg
      901 cggcgccgct gtcgcaaatt acgtgtccat tctggagccc ttccgctgat tcccactgcc
      961 aatctggcgc atctgctgat ccagacagcg cggcggtttc ccgaccgtcc cgcactgatc
     1021 tggcgcgaca ccacctggac ctgggctgaa ttcaacgcac gggtccaggc cgcggcgggc
     1081 gctctggcgg cgcgcggtgt tcggcatggc gatcgcgttc tgctgcacgc ccgcaattcc
     1141 aacgcggtgc ttgagtcgat gtttgcgacc tggatgttgg gtgctgtctg ggtgccgacc
     1201 aatttccgcc ttaccccgcc cgaggtcgcg tatctcgcaa cctcatcagg cgcctcggtg
     1261 catatttttg acagtgcctt ccccgaacat gcggccgcgg cgaaaacgga aaatccttcg
     1321 tgccggctgg aagtgtcgat cggcgaagac tgggaaacgc tggcaaccga aacggggaaa
     1381 attacccggc cggcggatgt cgacagggat catcccgcct ggtttttcta cacgtcgggc
     1441 actacgggcc agcctaaggc gggtgtgctg acgcatggcc aactggaata tgtcatttgc
     1501 aaccatctgt gcgatctgat gcccgccacg accgagaacg atgtgtccct cgtggtggct
     1561 ccgttatcgc acggtgccgg tatccacgct ctgccgcaag tcgcgcgcgg cgccgccacc
     1621 gtgctgttgc cgagtgaacg tttcgatgtc gccgaggcgt ggcgactggt tgaacagcac
     1681 cgcgtctcca acatgttcac cgtgccgacc attttgacca tgctgacgcg tcacgaggca
     1741 gtcgatcgct acgatcattc cagtctgcgt tatgtcattt acgccggtgc gccgatgtat
     1801 cgtgcggatc aaatacaggc gctggagaag cttgggccgg tactggtgca gtatttcggc
     1861 atgggcgagg tgaccggcaa catcaccgtg ctgccgccgt cctgccacac cctgaacgac
     1921 gcagtaatgc cgatcggcag ctgcggcttt ccgcgcaccg gcatggacgt aacgattctc
     1981 gacgaggtcg gcacccattt gcccccgggt accaccggag aaatctgcgt gcgtgggccg
     2041 ggcgtattcg ccggctacca caacaatccg gcggcgaccg agaaggcgac ggcgtttggc
     2101 tggttccaca ctggcgatct cggccacatg gacacgcgcg gtttcgttta catcaccgga
     2161 cgtgcctcag atatgtacat ttcgggcggc tcgaatgtgt atccgcgcga aattgaagag
     2221 gtcttgttga cccatcctgc ggtggccgag gtctgcgtcg tcggcatgcc gcacgagaaa
     2281 tggggcgaaa ccggtgtcgc ggtgctggtg ctgaacgagg gcatgacggt gacggaacat
     2341 atgttggcag cccatatcga aggcaagctc gcccgctaca agcatccggc ttcattcgta
     2401 atctggccgg aactgccgaa atccggttac ggcaaagtgg tcaagcgtga cgtcaggcgc
     2461 ttattggagg agacatgatc gagccgacac ggatccaagg ctatcacgcg cacatatatt
     2521 atgacgcgct tagccggcct cacgcagccg aactgcggga ggtagtcgaa cagcgtttcg
     2581 acgtcagaat ggggcgctgg cacgacgtgc cggtcgggcc tcacccctgc gcgatgtatc
     2641 agatcgcatt tgaaaatgac cag
//
LOCUS       DATAVD010000668         1906 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3413052, whole genome shotgun sequence.
ACCESSION   DATAVD010000668 DATAVD010000000
VERSION     DATAVD010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1906
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3413052"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(91..915)
                     /locus_tag="VHX39_12575"
     CDS             complement(91..915)
                     /locus_tag="VHX39_12575"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX3991997.1"
                     /translation="MDHVVTGAEHEFYADNGYLVLPNLLSEDELQQWRSAVEEAVSQR
                     GEQRFSFENDEALSVAAGSEAADERQYYDRVFTQRVNLWQTSDAVRQLMLDERLGRIV
                     ADVAGIEGVRIWHDQALIKEPYANPTAFHLDVPYWSFSSADAITIWIALDEATVANGC
                     LYYVPESHKARKFDNVAIGNEIGALFDVYPEWATRAPVPCPVPAGGALFHNGLTFHGA
                     GANMTPGRRRAMTCAYMPDGSTFNGTPNVLPPEYLNTLRVGDPLVNGKQNPLIFHR"
     gene            complement(1072..1287)
                     /locus_tag="VHX39_12580"
     CDS             complement(1072..1287)
                     /locus_tag="VHX39_12580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3991998.1"
                     /translation="MIEPSDSELATVRSALASFGVSPTEAELSSIALGWDLQRAAIDR
                     LYAAPEARYAEPALRFHADAVAVEWTG"
     gene            complement(1332..>1906)
                     /locus_tag="VHX39_12585"
     CDS             complement(1332..>1906)
                     /locus_tag="VHX39_12585"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX3991999.1"
                     /translation="STLAELGADVVEVSLPYWAEMITADLVTMCCEAAAYHRPDLQSR
                     WEDFFASTRATLALGGMVSGADYVQAQRMRRVAQTALARMFGDLDAMVMPTAATGSPP
                     YEALGDSEGRLDTRALFGTIFTPYWDSVGNPVLVVPMGFTEAGLPLSMQIAGPAFGEA
                     GVLAVGDAFQQRTDWHLRVPTLVDDVSAAA"
BASE COUNT          345 a          671 c          577 g          313 t
ORIGIN      
        1 tcagccgggc atccgggccg cggtgcacgt ttgtaacccc gccgggcctg agccgacgtc
       61 agggcaaggc cggctcacgg cccggaaaac ctagcggtgg aagatgagcg gattctgctt
      121 gccgttgacc aacggatccc ccacccgcaa cgtattcagg tattccgggg gcaacacatt
      181 cggagtgccg ttaaaagtag atccgtccgg catgtaagcg caggtcatgg cccgccgccg
      241 acccggcgtc atgttcgcac cggcgccgtg gaacgtcagg ccgttgtgga aaagagcacc
      301 gccggcgggc accggacacg gcaccggcgc ccgcgtcgcc cactccggat acacgtcgaa
      361 cagggcgcct atctcattcc cgatcgcgac attgtcgaat ttgcgcgcct tgtgactctc
      421 gggcacatag tagagacaac cattcgccac ggtcgcctcg tccagcgcga tccagatggt
      481 gatggcatcg gccgaggaaa atgaccagta cggcacgtcg aggtgaaatg cggtggggtt
      541 ggcgtacggc tccttgatca gggcctggtc atgccagatc cgcacgccct cgatcccggc
      601 cacgtcggcc acgatccggc ccagccgctc gtccagcatg agctgccgca ccgcgtcact
      661 ggtctgccac agattgaccc gctgggtgaa cacccggtcg tagtattgcc gctcgtcggc
      721 cgcctcgctc ccggcggcga cgctgagcgc ctcgtcattc tcgaacgaga atcgctgctc
      781 accccgctgc gagaccgctt cctcgaccgc tgagcgccac tgctgcagct catcctcgct
      841 cagcaggttc ggcagaacca gataaccgtt gtcggcgtag aactcgtgct ccgccccggt
      901 gaccacgtga tccatcgtga cgcctccgat cggtctgccg cgaccgacat cgatgcagct
      961 caccgcctgt ctatcacggc gaggcgcacc accgttcagc tccttcccgg cggcgtccgc
     1021 gaccggccac tgacgccgcg ctcaccacca cccatcaggc gccgcggccg gtcaacctgt
     1081 ccattccact gcgaccgcgt ccgcgtggaa ccgcagggcc ggctctgcgt accgcgcttc
     1141 cggtgccgca tagagcctgt cgatggccgc gcgctgcagg tcccagccga gtgcgatcga
     1201 cgagagttca gcttcagtgg gactgacccc gaacgatgcc agcgcgctgc gcacggtggc
     1261 gagctcagaa tcggagggtt caatcatgtc ggttgcctga cggggcatat ttgatccttt
     1321 cactagtggg atcaggcggc ggcagaaacg tcgtccacca gcgtgggaac gcgcagatgc
     1381 cagtcggttc gctgctgaaa tgcatcaccg acggcgagaa ctccggcctc gccgaaggct
     1441 ggaccggcga tctgcatgga cagcggcagt cctgcctcgg tgaaacccat gggcacgacc
     1501 aggaccggat tgcccacgct gtcccagtac ggcgtgaaga tcgtgccgaa cagcgcccgg
     1561 gtgtcgagcc gcccctcgga gtcacccaac gcctcatacg gcggcgatcc ggtcgccgcc
     1621 gtcggcatca ccatcgcgtc aagatcgccg aacatcctgg cgagcgcggt ctgcgcgacc
     1681 cgccgcatac gttgtgcctg cacgtaatcc gcgccggaca ccattccacc caacgccaac
     1741 gtcgcacggg tcgaggcaaa gaagtcttcc caccgggact gcagatccgg gcggtgatag
     1801 gccgctgcct cgcaacacat cgtcaccagg tctgccgtga tcatttccgc ccagtacgga
     1861 aggctgacct cgaccacatc agcgcccaat tccgccaggg tcgaga
//
LOCUS       DATAVD010000669         3666 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2667720, whole genome shotgun sequence.
ACCESSION   DATAVD010000669 DATAVD010000000
VERSION     DATAVD010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3666
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2667720"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            371..1309
                     /locus_tag="VHX39_12590"
     CDS             371..1309
                     /locus_tag="VHX39_12590"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3992000.1"
                     /translation="MSVFVIGGTGFIGLRVIRLLAARGEDVVCMDINPNAAPFADLGS
                     QVRVMRGDVTQFDDVMSAMSGAKPSRVINLSYYLGSEHAPHVATKLNILGMDNCFEAA
                     RICGVNRVVYASSLAVNGMQKHYGDRMITEDDFRHGTNQYAVHKIFNEFQAADYNEKH
                     GMTITGIRPANVTGPDKVRGSVDHVNCVTQPARGKPVSFPHKDAMRCPVHVDDIAEVF
                     TRVLMTDKPRQSVYNTGGTAISLGDLADIVRGYLPDARITFEKETGGKEISGNYMIDN
                     SRLIEEFGIQYRPFRQRVLQIINEVRAQENLSPIAG"
     gene            1334..2065
                     /locus_tag="VHX39_12595"
     CDS             1334..2065
                     /locus_tag="VHX39_12595"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX3992001.1"
                     /translation="MNRLAGKIILISGGARGQGAAEARLFVAEGAKVVLGDVLEAEGK
                     RLAAELGDAAVFVRQDVTREEDWTKAVNAAAGLGGLHGLVNNAGIYQPATLMETDAAL
                     FERHMRINQLGCFLGMKAVVPLMEQSGGGSIVNISSVAGLRGSPGAIAYSATKWALRG
                     MTKAAAVDLAPRRIRVNSVHPGPIDTEMLKVRTPEQNQQRLKAVPMKRQGTAKEVANL
                     VLFLLSEESGYITGAEVAIDGGATL"
     gene            complement(2070..2324)
                     /locus_tag="VHX39_12600"
     CDS             complement(2070..2324)
                     /locus_tag="VHX39_12600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992002.1"
                     /translation="MTITVVTDQGTHLLITDGTRYAVIERRNDRLYNCHNIQRAGIAA
                     KDIATVERILDSGDWTDRETAQQTFGAITERGTGLAEHMR"
     gene            complement(2569..3156)
                     /gene="raiA"
                     /locus_tag="VHX39_12605"
     CDS             complement(2569..3156)
                     /gene="raiA"
                     /locus_tag="VHX39_12605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_component: GO:0022626 - cytosolic ribosome [Evidence
                     IEA];
                     GO_function: GO:0045182 - translation regulator activity
                     [Evidence IEA];
                     GO_process: GO:0009386 - translational attenuation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HEX3992003.1"
                     /translation="MQITVSGKQVDLSDALRTRVSTQMDSIAGKYFDHALEALVTFSR
                     ARSFFTCDINVHAGRGLQLRGEGEAADANTAFDDAAEHIAKRLRRYRRRVNEHHRDLA
                     QRARPEAARQYILQEEVNGVDHATTDGRTLDEAFATVIAETQTEIASLSVGEAVMRMD
                     LADQPVMMFRNSASGVLNVVYRRDDGHIGWINPGA"
     gene            complement(3326..>3666)
                     /locus_tag="VHX39_12610"
     CDS             complement(3326..>3666)
                     /locus_tag="VHX39_12610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012812970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2252 family protein"
                     /protein_id="HEX3992004.1"
                     /translation="QTVPDPFLGWTEDRGDDQQCYIRQLKDSRLAVIGADLAEGALPY
                     HAALCGVALARAHARSGDPARIAGYLGTGSAFDSAVSAFALAYAAQNKADWRLFLEAV
                     KAGQIDASGA"
BASE COUNT          672 a         1125 c         1187 g          682 t
ORIGIN      
        1 atctgtccga aggtccgatt gttgttcgag aaagaagcaa gcaagattct aacacagatt
       61 tagcggatta agcgcacaga ttacccggac ggggtcgtta gcgcgcgagg cgccctttcc
      121 ggtgtccggt caagctccgg ccggggaggc cgtgacaggt tattccgtgt aatccgagcc
      181 cttcatcggt gtaatctgtg ttggattctt tttcgttgcg cgctcaacac cgctatcagc
      241 cagcgccggt cccaccgagc cagacgacag gaaaatgtca cgcggggtcc cctgtcggtc
      301 ggccgacttt tgccaccgcc gtccacccaa gctatcgtcc cacaaaataa cgctcgggaa
      361 ggaaatcacc atgtcggtct ttgtcatcgg cggcaccggc tttatcggac ttcgcgtcat
      421 caggctgctc gcggcacgcg gcgaagacgt cgtgtgcatg gacatcaacc cgaacgccgc
      481 ccctttcgcc gacctgggca gccaggttcg ggtcatgcgc ggcgacgtga cccagttcga
      541 cgacgtgatg tccgcgatga gcggcgccaa accgtcgcgg gtgatcaacc tgtcctacta
      601 cctgggcagc gagcatgcgc cgcacgtcgc gaccaagctg aacatcctcg ggatggataa
      661 ttgtttcgag gccgcgcgta tctgcggtgt caaccgcgtg gtctatgcca gttcgctcgc
      721 cgtcaacggg atgcagaagc attacggcga caggatgatc accgaggacg acttccgcca
      781 cggcaccaac caatatgctg tgcacaagat cttcaacgaa ttccaggcgg cggattacaa
      841 cgaaaagcac ggcatgacga tcaccggcat ccgtccggcc aacgtcaccg gtcctgacaa
      901 ggtccgcggg tccgtcgatc acgtcaactg cgtcacccag ccggcacgcg gcaagccggt
      961 gtcgttcccg cacaaggatg cgatgcgctg cccggtgcat gtcgatgaca tcgccgaggt
     1021 cttcacccgc gtgctgatga ccgacaagcc gcgccagagc gtctacaaca ccggcggcac
     1081 cgcgatcagc ctgggcgacc tcgccgacat cgtgcgcggc tatctgccgg acgcgcgtat
     1141 caccttcgag aaggagaccg gcggcaagga gatctccggc aactacatga tcgacaacag
     1201 ccggctgatc gaggaattcg gcatccagta ccgcccgttc cgccagcgcg tgctgcagat
     1261 catcaacgaa gtccgagcac aggaaaatct gtcgccgatc gccggctgag cgtctgttgc
     1321 cagggaggaa ccaatgaacc gtcttgccgg aaagatcatc ctgatcagtg gtggtgcgcg
     1381 cggccagggc gccgccgagg cccgcctgtt cgttgccgaa ggcgcgaagg tcgtcctcgg
     1441 cgacgttctg gaggcggaag ggaaacgcct cgccgcggaa ctgggggatg ccgctgtttt
     1501 cgtgcggcag gacgtcacgc gggaggaaga ctggaccaag gcggtgaatg ccgccgcggg
     1561 gctgggtgga ttgcatggcc tggtcaacaa cgccggcatc tatcagccgg ctaccctgat
     1621 ggagactgat gccgcgctgt tcgagcggca tatgcggatc aatcagcttg ggtgctttct
     1681 cggcatgaag gcggtcgtcc cgttgatgga gcaatccggt ggcggatcga tcgtcaatat
     1741 ttcctcggtt gccgggttgc ggggatcacc gggcgcgatc gcctacagcg caacgaaatg
     1801 ggcgttgcgc ggaatgacca aggcagcggc ggtcgatctg gcgccacgca ggatcagggt
     1861 caattcagtg catcccggac cgatcgacac cgaaatgctg aaggtgcgga caccggaaca
     1921 aaaccagcag cggctgaagg cggtgccgat gaaacgccaa ggcacagcga aggaggttgc
     1981 aaacctcgtg ctgttcctgc tgtcggaaga aagcggctac atcaccggcg ccgaggtcgc
     2041 gatcgacggc ggagcaacat tgtagccacc taccgcatgt gctccgcgag gccggttccg
     2101 cgttcggtga tggcgccgaa cgtctgctgg gcggtttcgc gatcggtcca atcgccgctg
     2161 tcgagtattc gttcgaccgt ggcaatgtct ttcgccgcta tgccggcgcg ctgaatgttg
     2221 tggcagttgt agaggcggtc gttgcggcgc tcgattacgg cgtatcgcgt gccgtcggtg
     2281 atgaggaggt gggttccttg gtccgtgacg acggtgattg tcatgatcca ggtcctttgg
     2341 atgccgcgca gggtgcggcc gaacgggtgt cctgcgtcga acgcgcgggt gctgctgggg
     2401 ttccagggtt ggccggcaat taaggtaatt ctgcaaccgg gcggccgagc cgttggcgcc
     2461 gttcgagccc gccggagtgg gcaataggtg ccctggggtg ggcaggcttc ggccgatccg
     2521 cgccgcagcc tgttcccccc aagccgggga gggaacaggc ctgacgcgtc aggccccggg
     2581 gttgatccag ccgatatggc cgtcgtcgcg ccggtagacc acgttcagca cgccggaggc
     2641 gctgttgcgg aacatcatca ccggctgatc ggccagatcc atccgcatga ccgcttcccc
     2701 caccgacagg ctggcgatct cggtctgggt ttccgcgatc acggtggcga acgcttcatc
     2761 cagcgtgcgg ccatcggtcg tggcgtgatc gacgccgttc acttcctcct gaagaatata
     2821 ctggcgagcg gcctcgggcc tcgcgcgctg ggcgaggtct cgatgatgct cattcacccg
     2881 ccggcgatag cggcgcaggc gcttggcgat atgctccgcc gcgtcgtcga aggcggtgtt
     2941 ggcgtcagcg gcttctcctt caccacgcag ttgcaaccct cgtccggcgt ggacattgat
     3001 atcgcatgtg aaaaaacttc gggctcggct gaaggtaacc agcgcctcca gcgcatggtc
     3061 gaaatatttg cccgcgatcg agtccatctg cgtggacacc cgggtccgca atgcatccga
     3121 caaatcgact tgtttgccgg agaccgtgat ctgcatcatt ttctcccgac cagttcgaca
     3181 cgccgctcgg gtcgatcagg tgatcggtgc ccagcggcta taggtatttg ggcacggtgc
     3241 gggttgcggt gtccactccg tatcatccat ttgtcacata tgcacactgg tgtgtgacat
     3301 tggatgacga acgggcggcg ggttgctacg ccccgcttgc gtcgatctgg ccggccttga
     3361 cggcttccag gaacagccgc cagtcggcct tgttctgggc cgcgtaggcc agggcaaagg
     3421 cggacaccgc cgagtcgaaa gcagagccgg ttccgagata gccggcgata cgcgccggat
     3481 cgcccgatcg cgcgtgggcg cgggccagcg ccaccccaca cagcgccgcg tgatagggca
     3541 gcgcgccttc ggccaggtcg gcgccgatca ccgccaggcg gctgtccttc aactgccgta
     3601 tgtaacattg ctgatcgtca ccgcggtcct ccgtccagcc caggaaaggg tcgggcacgg
     3661 tctgca
//
LOCUS       DATAVD010000670         2361 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_433814, whole genome shotgun sequence.
ACCESSION   DATAVD010000670 DATAVD010000000
VERSION     DATAVD010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2361
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_433814"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(346..1035)
                     /locus_tag="VHX39_12615"
     CDS             complement(346..1035)
                     /locus_tag="VHX39_12615"
                     /inference="COORDINATES: protein motif:HMM:NF018264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1109 domain-containing protein"
                     /protein_id="HEX3992005.1"
                     /translation="MRETSDLIDALVDSATPVRRLRPPLLRAALWLALAAGVLGLLCI
                     AHGMRADISIRLQQPVFVVSMVAALVTAILAAWASFKLSLPDSSRWWLLLPAPALAVW
                     VSTIGYGCLTDWVTMSPDGVRMGEAVRCFATLLLTSVPLSIAMLIMLRHAALLRPTVV
                     CAAGGLAIAAMTSFALSLIHDLDATIMILIWNLGVAALIAGLAGAFGRSVLAWIAARV
                     MPALPPQLTRS"
     gene            complement(1032..1673)
                     /locus_tag="VHX39_12620"
     CDS             complement(1032..1673)
                     /locus_tag="VHX39_12620"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX3992006.1"
                     /translation="MPGCSKENPPYPHAPKLMLVASTEPDGTRTSNSQPDWSALMAGA
                     QNGDRDAYRMLLQQIEPYVRSIAARCFNRPADAEDAVQDVLLTVHAVRHTYDPKRPFA
                     PWLVAIANRRIIDRLRRHTRQKAREVELSPEHETFAEAAANFDHTTSAERALVGAIDK
                     LPPDQREAIRMLKLREMSLKEASQASGRSIVALKVATHRAIRNLRQLLKGEPS"
     gene            1842..2153
                     /locus_tag="VHX39_12625"
     CDS             1842..2153
                     /locus_tag="VHX39_12625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008495212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2282 domain-containing protein"
                     /protein_id="HEX3992007.1"
                     /translation="MNRRLFAISTLTTAVGLALAAQAPVVRAEGMANPPQVVKDNMER
                     MGKNKLEKCYGISAAGKNDCAQGAHSCAGQATQARDPQSFVLLPAGDCGKIQGGKTSA
                     T"
     gene            2161..>2361
                     /locus_tag="VHX39_12630"
     CDS             2161..>2361
                     /locus_tag="VHX39_12630"
                     /inference="COORDINATES: protein motif:HMM:NF016970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HEX3992008.1"
                     /translation="MLMPPPTISQSSLIPAKAGIGLRFQHHQAVLDTRPEVAWMEVHT
                     ENYMGGGTPLRYLDSIRRDTPIS"
BASE COUNT          472 a          756 c          728 g          405 t
ORIGIN      
        1 cccggcgatc aggatttgtt gtcaccgtcg cccgtgaaaa ccttgttttc gcggacttga
       61 acgccaacca tgaggcgtca gaaccacacg acttctccgt ccgcatcagc gctgttcgtc
      121 aagagcgcct cagcgtccac cgcagcccgt tccaacgttc gtgacgatgg ccgacgcccc
      181 tcctccggaa cgggatggcg gagacacgca ggtgatttgc gcaaaacgcg aaacggaata
      241 ttttttcgcc agggactgga caggtagaaa cagcttgatc cggctggaga aattagattt
      301 tgcgcgcaag cccgtaagga gcgcctcggc gggatttttg tggtgtcacg accgggtcag
      361 ttgcggcggt agcgccggca tgacgcgcgc cgcgatccac gccaagacag accggccaaa
      421 tgccccggcc agtcccgcaa tcagggcggc gacgcccaga ttccagatca ggatcatgat
      481 cgtcgcgtcg agatcgtgga tcagcgacag cgcaaacgac gtcattgccg cgatcgccaa
      541 tcctcccgcg gcgcagacga ctgtcggccg cagcagggct gcgtgacgaa gcatgatcag
      601 cattgcaatc gacagcggaa cgctggtcaa cagcaaggtg gcaaagcagc ggacagcctc
      661 gcccatgcgt acgccatcgg ggctcatggt gacccaatcg gtcaggcacc cgtaaccaat
      721 cgtcgagacc cacacggcga gcgccggcgc cggcagcaac agccaccagc gcgaactgtc
      781 cggcaggctc aatttgaaag aagcccatgc cgccaggatg gccgtgacca gcgccgcgac
      841 catgctcacg acgaacaccg gctgctgcaa ccggatggaa atgtcagctc gcatcccgtg
      901 cgcgatgcaa agcagcccca gcacgccggc cgcaagcgca agccacaggg ccgcgcgcag
      961 caacggcggg cgcagccgcc ggacgggggt cgccgaatcg acgagcgcat caatgaggtc
     1021 ggatgtttcc ctcatgacgg ttcgcctttc aacaattgcc gcaggttcct gatcgcgcgg
     1081 tgggtggcga ccttcagtgc cacgatcgac cggccgctgg cttgtgaagc ctccttcagc
     1141 gacatctccc tgagtttcag catcctgatc gcttcgcgct ggtccggcgg cagcttgtcg
     1201 atcgcgccga ccagcgcacg ctccgccgag gtcgtgtgat cgaagttcgc cgcggcctcg
     1261 gcaaaggttt catgttcggg ggacaattcg acttcccgag ccttctgacg ggtatgacgg
     1321 cgcagccgat cgatgattcg gcgattggcg atcgcgacca gccagggcgc gaatggtcgt
     1381 ttcggatcgt aggtatgacg aacggcatga acggtcagca gcacatcctg aacggcatct
     1441 tcggcgtcgg ccggccggtt gaaacatctc gccgcgattg accggacata gggttcgatc
     1501 tgctggagca acatacgata ggcatcacga tcaccgttct gcgcgcctgc catcaatgcc
     1561 gaccagtccg gctggctgtt cgacgttcgc gtgccgtccg gctccgtcga ggcgacaagc
     1621 atcagctttg gtgcatgggg gtacggagga ttttccttgc tgcaacccgg catgtccacc
     1681 tgtttccggc gccgatcgag gcggtatccg gcgactggat acaccggcgg cggcaactgc
     1741 gacagaaaag aatttttcga tatgccgcta accttttccg gctcggggtc gaacctcgtc
     1801 ctgtgcgttc cgcgatggga cacaacagga gaggaagaca catgaaccgc cgtctgtttg
     1861 ccatatcgac tttgacgacc gccgtcggcc ttgcgcttgc ggcgcaggcc cccgtcgttc
     1921 gcgccgaggg catggccaat ccgccccagg tcgtgaagga caacatggag cgcatgggca
     1981 agaacaagct tgaaaaatgc tacggcatca gcgccgcggg caagaacgat tgtgcccaag
     2041 gcgcgcattc ctgcgccggc caggcgacgc aggcccgcga tccccaatcc ttcgtgctcc
     2101 tgccggcagg cgactgcggc aagatccagg gtggaaagac gtcggcgact tgatccggcc
     2161 atgctgatgc cgccccccac catcagccag tccagcctga ttccggcgaa agccgggatc
     2221 gggctgcgct tccagcatca ccaggccgtg ctcgacacgc gtccggaggt ggcctggatg
     2281 gaggttcata ccgagaacta catgggcggc gggacaccgt tgcgttatct cgactccatc
     2341 cggcgcgaca cgccgatatc g
//
LOCUS       DATAVD010000671         2686 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_620547, whole genome shotgun sequence.
ACCESSION   DATAVD010000671 DATAVD010000000
VERSION     DATAVD010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2686
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_620547"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1286)
                     /locus_tag="VHX39_12635"
     CDS             complement(<1..1286)
                     /locus_tag="VHX39_12635"
                     /inference="COORDINATES: protein motif:HMM:NF012431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3992009.1"
                     /translation="MAELTGSEIIAKCLQKAGIKDIFYIMGGPMLLAEATAIKEGIRM
                     IDVRHEQAAAFACQAYSRLKQTPSVCMAASGPGVTNLITGMANALVDCCPVVAFGGSS
                     PQSQFGRQVFQEIDQVELMRGCCKHVDRIVNLKRIPQQVSFALQCAMSGKPGPVYVDC
                     PGDMLYQKLDENLIDWSYVERPLMDSRSPGDPRQVAALVAALQKAERPVIVSGSGVIW
                     SRAWNEMQQFVEAAGIPFYTTPQGRGVVPDDHEYAYLAMRSSAFRDADLIIVLGTRMN
                     YVIGHASPPRFGPNATIARIDVDAGEIAMAARYVDIPIVGDCKAVLGQLLEAIKGKVS
                     PNNFSAWRKKLHDGEQQKRSAAGANRPAEDGDIHPVRMLEAVRDFMKRDAILCVDGQE
                     TLNFGRQTMSTFAPGHRLNSGPFGTMGVGLPFGVGA"
     gene            complement(1342..2586)
                     /locus_tag="VHX39_12640"
     CDS             complement(1342..2586)
                     /locus_tag="VHX39_12640"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3992010.1"
                     /translation="MDATTGEARLGGQGCLNGVRILDFTQFEAGPSCTEALAWLGAEV
                     VKVENPGGGDPGRLISGKPGVDDPYFLLFNANKKSITVNLKDPKGLQLVKDLAKQADV
                     ICENFAPGAIERLGLGYDVIKAINPSIVYCQVKGFGEGSPYEKNLAFDMIAQACGGTM
                     SITGERDGRPLKPGPSLGDTGTGMLLAISILGALYRRKETGQGEHLQVAMQDAMLHYI
                     RIAFAAQYRTGKAALRAADSSVSATTPPMGTFPCKGGGSNDYVYIFTSRANPEHWTRL
                     LKVIGREDLIGDERYDTPWKRAEKPDEVNGMISDWTRQHSKHEAMEIIGAAGIPAGAV
                     LDTMELSTDPTFEQRGIMPVIDHPVSGKFKMVAWPVRFSGSPPPVKPAPLLGANNEDV
                     LTHWLGMGSGDVGTLKASGVIG"
BASE COUNT          491 a          847 c          792 g          556 t
ORIGIN      
        1 ttggcgccga caccgaacgg caggccgaca cccatggtgc cgaacggacc ggagttcaaa
       61 cgatgtcccg gcgcaaatgt cgacatcgtc tggcggccga aattcagtgt ctcctgacca
      121 tcgacgcaca ggatggcgtc acgtttcatg aaatcgcgca ccgcttccag catgcggacc
      181 gggtgaatgt cgccgtcctc ggcgggccgg ttggcgccgg cggcgctgcg tttttgctgc
      241 tcgccgtcat gcagcttctt gcgccaggcg ctgaagttgt tcggtgagac cttgcccttg
      301 atcgcttcca gcaactggcc gagcaccgct ttgcaatcgc cgacgatcgg aatgtcgacg
      361 taacgggcgg ccatggcgat ttcgccggcg tcaacgtcga tccgtgcgat cgtcgcgttc
      421 ggtccgaacc gaggcggtga cgcgtggcca atgacgtagt tcatccgcgt gcccagtacg
      481 atgatcagat cggcatcgcg gaacgccgac gaccgcatcg cgagataagc atactcatgg
      541 tcatccggca ccacgccgcg gccttgcggg gtggtgtaga acgggatgcc cgccgcctcg
      601 acaaactgct gcatttcgtt ccaggcgcgt gaccagatca cgccggaacc cgacacgatt
      661 accggccgct cggccttctg cagtgccgcc accaaagccg ccacctgccg cgggtcgcca
      721 ggcgaacgag agtccatcag cggccgttcg acatagctcc aatcgatcaa attctcatcg
      781 agcttttggt acagcatgtc gcctgggcaa tcgacataga ccggacccgg cttgccggac
      841 atcgcgcatt gcagtgcaaa actcacctgt tgcgggatgc gcttgaggtt gacgatacgg
      901 tcgacgtgtt tgcaacagcc gcgcatcagt tcgacctgat cgatctcctg aaacacctgg
      961 cggccaaact ggctctgcgg gctcgatccg ccgaatgcca caaccgggca acaatcgacc
     1021 aacgcattgg ccatgccggt tatcaggttg gtcacgccgg gacccgacgc cgccatgcac
     1081 acactgggcg tttgcttcaa tcggctatag gcctggcagg caaacgccgc cgcctgctcg
     1141 tggcggacgt cgatcatgcg gatgccttct ttgatggcgg tcgcttcggc cagcagcatc
     1201 ggcccgccca tgatatagaa gatatccttg atgcctgctt tttgcagaca tttggcgatg
     1261 atttccgagc cggtcagttc ggccatgatt acagtctcct gagttgaaac atactgttcg
     1321 tgcgggccgg gccaggacgg atcagccgat gacgccgctg gctttcaatg ttccgacatc
     1381 gcccgagccc atgccaagcc aatgggtcag cacgtcctca ttgtttgcac cgagcaatgg
     1441 cgccggcttt accggtggcg gactaccgga gaaccgtacc ggccaggcaa ccattttgaa
     1501 cttgccactg accggatggt cgatcaccgg catgatgccg cgctgctcga acgttggatc
     1561 cgtgctgagt tccatcgtgt ccagcaccgc accggccgga atgccggcgg cgccgatgat
     1621 ttccatcgct tcgtgcttgc tgtgctggcg cgtccagtcg gaaatcattc catttacctc
     1681 gtccggcttt tcggcgcgct tccacggggt gtcgtaacgt tcgtcgccga tgagatcttc
     1741 gcggccgatg accttcagca accgggtcca atgttccggg tttgcgcggc tggtgaagat
     1801 gtagacataa tcgttcgagc cgccgccttt gcaggggaac gtccccatcg gcggagtcgt
     1861 cgccgaaacg gaactatcgg ccgcgcgcaa tgcggcctta ccggtgcggt actgtgcagc
     1921 aaacgcgatg cggatgtagt gcaacatcgc atcttgcatt gccacctgca gatgctcgcc
     1981 ctgaccggtt tccttgcgcc ggtataacgc gccaaggatg gaaatcgcca gcagcatgcc
     2041 cgtgcccgta tcgccaagcg atggaccggg cttcaagggg cggccatcac gttcgccggt
     2101 gatgctcatg gtgccgccgc aggcttgcgc gatcatatcg aatgcgagat ttttttcgta
     2161 cgggctgccc tcgccgaaac ccttcacctg gcaatagacg atcgacggat tgattgcctt
     2221 gatgacgtcg tagccaagac ccaaacgctc gatcgctccg ggcgcgaaat tttcgcagat
     2281 gacatcggcc tgtttcgcga ggtccttgac cagttggagg cctttcggat ccttcagatt
     2341 gaccgtgatc gacttcttgt tggcgttgaa cagcaagaaa tacgggtcgt ccacgcctgg
     2401 cttgccgctg atcaggcggc ctggatcgcc gccgccagga ttttccacct tgacaacttc
     2461 ggcgccgagc caggccagtg cttccgtgca ggacggtccc gcctcgaact gcgtgaaatc
     2521 aagaatccga acgccgttga ggcagccctg gccgcccaat ctggcttcgc cggtggtggc
     2581 atccatgcgc gtttcctcca tcccatgccc gcttgcgcgg gttgcaatcg cggctggccc
     2641 ttgtggccga tttcccaggc taacccgtat gacggttccg cgtaag
//
LOCUS       DATAVD010000672        19341 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1738004, whole genome shotgun sequence.
ACCESSION   DATAVD010000672 DATAVD010000000
VERSION     DATAVD010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 19341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19341
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1738004"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..444)
                     /locus_tag="VHX39_12645"
     CDS             complement(<1..444)
                     /locus_tag="VHX39_12645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992011.1"
                     /translation="MRAGPGAAADEAILAFLRGLRPEGVASVCTGAMILGASGVLDGR
                     CATTRRHAVETDSVAPLEQLGRGGSVRTVAAQVVDAGVVTGGGVSLAIDTTLYLLGRL
                     YGQDAMAENARVIEYDRAYAANGAALGVDGRSVQTAEDRPGEDQRR"
     gene            complement(413..682)
                     /locus_tag="VHX39_12650"
     CDS             complement(413..682)
                     /locus_tag="VHX39_12650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992012.1"
                     /translation="MKQVSDPALFGVLVYEGVELIDLGGTVGVISMARRVPPNVAATV
                     VARRVGPVRLAGGLTVQADHGIDAAPECDVVIVCGDAGWPGGRGR"
     gene            843..2165
                     /gene="ugpB"
                     /locus_tag="VHX39_12655"
     CDS             843..2165
                     /gene="ugpB"
                     /locus_tag="VHX39_12655"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008495367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     substrate-binding protein UgpB"
                     /protein_id="HEX3992013.1"
                     /translation="MKRRTLLATPIALAATRVRAAEKTKILWWHAMTAALADQVNHIA
                     NGFNASQNEVEIQAVYKGGYADTMTAVIAASRAGQAPHLVQIFEVGTGTMLAARKAVK
                     PVWELAKETGLAIDPKAYIPAVRGYYSLSDGRMASMPFNSSTAVMWYNKDAFRKAGLD
                     PDKAPATWQEVRKAAETIKAKNAAPVAMTTSWPVWVQMEQYSALHDLPFATKSDGFDG
                     LDAELTFNNKGQVKHIERLLQMSKEGSFKYAGRDNAPDPLIVSGEAAISFGSSSSRGD
                     LVKSAKFNWAEAYLPYDPDIIKTPKNSIIGGASLWTMTAPGRTQAEYKAVAEFLKYIG
                     KPDVDATWSQKTGYVPVTFAGYELSKQQGFFTKNVGADIPVEQLARGTVTPNTKGLRL
                     GRLPEIRNIIEEELEKALQGGQSAQQAMDVAVTRGNRVLREFAKAAKA"
     gene            2168..3049
                     /locus_tag="VHX39_12660"
     CDS             2168..3049
                     /locus_tag="VHX39_12660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX3992014.1"
                     /translation="MDRRTIFNGRLLPVALLLPQLLLTIFFFYWPAGQAVWSSLTTQD
                     AFGQGWVFVGMDNFVDLFTDPLYVASIIRTVFFCLAVSVLAMGVALALAVFADRSIAG
                     RGVYRTLLIWPYAIAPAMSAVLFLFVLNPRVGLLGRWLNDHGIAWDYALNGNQAMLMV
                     VSASAWKQVSYNFIFFLAGLQSIPRAVTEAARMDGAKGWHRFRTITFPLLSPTTFFLL
                     VVNVVYAAFDTFGTIYALTQGGPGQDTQTLVLKVFLDGVINQDIGSSSAQSVVLMVGV
                     IAITAVQFRFMGRKTVS"
     gene            3046..3876
                     /gene="ugpE"
                     /locus_tag="VHX39_12665"
     CDS             3046..3876
                     /gene="ugpE"
                     /locus_tag="VHX39_12665"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_process: GO:0015794 - glycerol-3-phosphate
                     transmembrane transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter permease
                     UgpE"
                     /protein_id="HEX3992015.1"
                     /translation="MKNRPDYLAHAVLILGVVLFALPVWLVFAGSTQDSDAIMRGDLS
                     LIPNLANLSVYKRVLLDGTMGTEPVWHMLMISLGMALAIACGKIFISILSAYAVVFFR
                     FPFRQVAFWLIFVTLMLPVEVRIIPTYAVMADFGLINTFTGLWVPLIASATATLLFRQ
                     IFTAIPDELVEAARIDGAGPLRFLWDIVLPVSRTNIAALFVILFVYGWNQYLWPLLVA
                     TNQGLDTIVIGIVKMIGEDTQTDWAAVMATAVLALLPPVLVVVLMQRWFVAGLTEGEK
                     "
     gene            3877..4944
                     /gene="ugpC"
                     /locus_tag="VHX39_12670"
     CDS             3877..4944
                     /gene="ugpC"
                     /locus_tag="VHX39_12670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008495364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HEX3992016.1"
                     /translation="MATLELQGLRKSFAATQVLRQIDLALADGEMLVIVGASGCGKST
                     LLRLVAGLETPTAGRITIGGRDVTGLDPSERDIAMVFQNYALYPHMSVFDNMAYGLRI
                     RGLSRGEITRKVEDAAALLGLDALLARKPRQLSGGQRQRVAMGRAIVRDPKLFLFDEP
                     LSNLDAKLRVQMRAEIRRLQRRLGVTSLYVTHDQVEAMTLGDRLLILHEGTPAQLATP
                     MEVFEHPADTYVAGFVGSPTMNFLPGHLVHDGTAVQLEAGPLIPLQGRRSGDAVTLGI
                     RPEHLTLGGSGLTLTVDLIEPLGSETLLHGRLPGHDADAMTVKVAGAVQATETVTVGV
                     QADQAHVFDAGTGKRIDPSGH"
     gene            complement(4950..7628)
                     /locus_tag="VHX39_12675"
     CDS             complement(4950..7628)
                     /locus_tag="VHX39_12675"
                     /inference="COORDINATES: protein motif:HMM:NF033208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choice-of-anchor E domain-containing protein"
                     /protein_id="HEX3992017.1"
                     /translation="MTTEPTILQTQTVADSAPGWNVPLSFNQFDPSLGTLADIDVGIV
                     GDVTGTAAIQNLGATAATLQIDLPSTIDVTAPDGTRLASVSPEASSTLNLAAYDGTAD
                     FIGTSGTVVSEFSSVATVVSDYIPSPGTGAAFVGTGSIDLTAHSQVSSRLYADGNLLG
                     LTQGEAGATVNVQYNYQPSANGSDSSGEYSSNFSSTVGIGSLPYEPSVTRTTVPQTLA
                     VSDRTTDWNTIVTANQFNPALGALLSVNLTITGDINAGLAAENLGSTSTSIGLTETAD
                     ITLTLPNDLGVAAADPSINSATNLAAFDGTIDFAGASGENLTSLTGTEVTSSDVTGNL
                     SAFIGSGTIALPIAANSPSVLTGPADLAAELLTEAGATVTISYTYAVSDGSGSFPPQI
                     DYLSPGGAGAAAPIIVGTEAAQSVTGQATIAPFSAVVISDPTAGQSEFATVTLSSAAN
                     GTLTNLSSGSYDAASGVYTVNGSAAAVTTAVDGLVFNPAPGQVPPGQTVTTGFTITDM
                     NTDGVRDTDATTSVIATAVAEPLAISGTEAGQGVTGQTTVAPFANVLISDPNAAQTET
                     VTVTPSAAGTGTLTNLDGGSYNAATGVYTVTGSAAAITTALDGLVFTPADVAPDKAVT
                     TGFTITDTDTSGLSVTDSTTSVAATAGVYIDTAAAAAAIVAELNGLANPPAITGAKAG
                     QAATDHGTIAPFSGVTIGDANANQTETVMVTLSAAANGMLTNLGGGHYNAMTGVYTVS
                     GSSAAVTDTLDGLVFKPTTGQVAPGQTVTTNFTIADTDTVGGRTTDAASSVISTATIG
                     ISATGPNRFISGGDGGTHPFSVNAQGTTSNAFSAPWSQPSGSPTLPLLAAGDFTLNVE
                     NNPGSGFSATFASQPGAYPIMSLTDAGLINGHPTVS"
     gene            complement(7817..9610)
                     /locus_tag="VHX39_12680"
     CDS             complement(7817..9610)
                     /locus_tag="VHX39_12680"
                     /inference="COORDINATES: protein motif:HMM:NF040438.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase domain-containing protein"
                     /protein_id="HEX3992018.1"
                     /translation="MITDIEIKSRLPFVGGATFGAAGAYERIDGIAIGALDPSHPSNR
                     GIALLDKAPRNAGGLVEYRSGFVLLRPADAAKGNGRLLYEVNNRGRIMLFANLCAGAA
                     GNQPATADDLGNALPLRLGFSLLWTGWDPGAPKTTGLSLDVPVINGVTKAIREEFVSG
                     TRLGVHDVFKLAYEAVGPASVSVRRTQTGPRVPVPSEMVDTRSVKPVGPIETGSIYEV
                     RYQATKPRVLGIGHAATRDIISHLRHHGTELMGRPVEHTLAFGISQAGRYLRDHIAQG
                     FNGDEDGRRVFDGVFTHVAGIGRVFHNTPFGQPFRTRTWHEDHDFPEVQFPHSAAAMD
                     DPITGDSGALLRGDATDPLMIETNTATEYWQKGASLLHSDPLGTRDIAPPANVRTYLL
                     PGTQHGGKAGMPRDNGPCINPRNWHDPMPAVRALLVALDAWVTSGRLPPDSRIPRIVD
                     GTLVAAAAVAFPAIPGLVRPHAANDAAPLEDWTDPKPPARAYVTLVPQVDADGNEIAG
                     IRLPDIAVPRGTFTGWNLYRPPYPAGELADREGTFLPFAATESEQGDDPRASLAVRYP
                     GTAYADALHTVIGKLLNDRFLLVEDAERYIA"
     gene            complement(9607..10254)
                     /locus_tag="VHX39_12685"
     CDS             complement(9607..10254)
                     /locus_tag="VHX39_12685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit B"
                     /protein_id="HEX3992019.1"
                     /translation="MTFRPLDRTGIAARIARDIPEGWFVNLGIGIPTGVSDHVPNDRE
                     VIFHSENGVIGAGPAPAPDKINPYLVNAGTQHITLRTGGSFVHHADSFAIARGGHLDL
                     CVLGAFEVAENGDIANWARSPDEPVKQVGGAMDLAIGAKRLWVAMEHITKGHGGSRIR
                     RACSYPLTAKGVVRRVYTDLAVLEITPRGFVVLDMIPGMTREELQERSEAELHWS"
     gene            complement(10266..10922)
                     /locus_tag="VHX39_12690"
     CDS             complement(10266..10922)
                     /locus_tag="VHX39_12690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit A"
                     /protein_id="HEX3992020.1"
                     /translation="MIDKFVPDVAAALAGIADGAVILLPGFGNGTPEALVKGLIAQGA
                     RDLTLVVNSGGRDTGPTADILASGQCRKLICSFVRADSVAGRLFAAGKLELEIVPQGT
                     LAERLRAAGAGVQAFYTPTGADTLLAEGRETRVINGRNCLLEYPLPGDVALVDAWEAD
                     RWGNLTHRESARNFNPVMAMAARLTIVQTHHIVPLGDIPPANVHTPGVFVHRVVHVPA
                     "
     gene            11253..11444
                     /locus_tag="VHX39_12695"
     CDS             11253..11444
                     /locus_tag="VHX39_12695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992021.1"
                     /translation="MLKNMILTRGDGEIIALPIVLDIAPLIGAKLMLADSLTIKDLLK
                     RAARQGVRKPVADPLNFAV"
     gene            11547..12476
                     /gene="cysK"
                     /locus_tag="VHX39_12700"
     CDS             11547..12476
                     /gene="cysK"
                     /locus_tag="VHX39_12700"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010514834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEX3992022.1"
                     /translation="MFGSVLDLVGGTPVVRLPRLQAADNLVADIALKLEFFNPLGSVK
                     DRIGLAMVEAAEQAGEIAPGTTTIVEPTSGNTGIALAFVAAAKGYKLIVVMPEGASVE
                     RRKLLRLLGAHVETTPAKLGMPGAIARADAIFARTSDAWIARQFDNPANPAAHQATTA
                     EEIWADTGGTVDIVVGGVGTGGTLTGIARGLKPRRPGLLVVGVEPQESAVLSGDSPGP
                     HRIQGIGAGFTPAVLDRDLLDEVVAVSEAESFAAARRCAAVEGLPVGISSGAVLHAMI
                     GLAGRKENAGKLIVGIAASFAERYLSTPLFAGL"
     gene            complement(12815..13240)
                     /locus_tag="VHX39_12705"
     CDS             complement(12815..13240)
                     /locus_tag="VHX39_12705"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX3992023.1"
                     /translation="MASPSIEDRFGINDLFVRYTCALDAGDTDTVIDCFAEDGTLVSP
                     AVGEHTGRAAITAFAHRFARFQAGGSQLRHVLSNLMMTVDGNRAHATCYLTVFLTKDG
                     KSRLLAPGRYDCELRKIGGQWRFQRRVVLHDHDYTLEGL"
     gene            complement(13346..14398)
                     /locus_tag="VHX39_12710"
     CDS             complement(13346..14398)
                     /locus_tag="VHX39_12710"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3992024.1"
                     /translation="MALNRKRLVYFERWFDPIAERVLSEQDDIELTCLQYTDPQADNW
                     TPLETAVGYQVSARTELKEPWFGNAALLARCPNMLAMSSAGAGFDVIDVDACNAAGVI
                     VVNQSGTNSEPVAEHAIALMLGLTKKVGYTHRAMMNGTATDRMKLSGHNIKGKTVGIV
                     GIGQIGRLTAKYANAFDMRVLACDPYLTEQQVAERGAQKVDFATLLAESDFITVHCPR
                     NSETVGMFNALAFAAMKPNAYFINTARGKIHEEGPLVEALKAGRIAGAGIDVFDVEPP
                     PPDHPLLHLDTVMATPHIAGVTIETLYDMSIAAAEQWIALLRGRVPPRLVNPEIWDRY
                     SDRFEQIIGFRPDKLT"
     gene            complement(14523..15848)
                     /locus_tag="VHX39_12715"
     CDS             complement(14523..15848)
                     /locus_tag="VHX39_12715"
                     /inference="COORDINATES: protein motif:HMM:NF013621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992025.1"
                     /translation="MRLEVATTVPADAAGCTKGINEQDYTAITPLTLPGLSFSIHGTI
                     STSDTTRTMRPSDAAWHQLIAATHASGRKAILAITGGGTGAIGELLRVPGGSRLLIEA
                     LVPYDALALAAFLGFAPAQASSSDTAIAMARTAQARAATLMPVGTDALGLGATAALVS
                     DRPRRGEHRFHIAIADSERITYCTGVMAKGRRDRAGEEDLVSRAIVLWLARACGIAAP
                     LPNSLLDADETFTETVTAALDPIDQLLAGKVDRVTVQADGQMMLSAPLPLLVLPGSFN
                     PVHDGHVSLARAAEEIRQQPATFEISVANVDKPPLTGETVRHRIAQFAGKRPVELTRA
                     PTFLDKSRLFPGATFVIGADTAERLVARRYYGDDEDRMDAALAEIANAGCSFLVAVRV
                     DTAGRVRTLSDIAIPSRYAGLFTAIPEHRFRLDTSSSEIRARAPSTGTT"
     gene            15904..17040
                     /locus_tag="VHX39_12720"
     CDS             15904..17040
                     /locus_tag="VHX39_12720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX3992026.1"
                     /translation="MKIIDVRAHVLEAQLAQPFAYSRMWYAKRMSMIVEIITDDGLTG
                     WGECYGPARINAAVVKELGSFLIGQDPVRSEFLWHELYARYRDHGQKGVVIQGLSGID
                     IALWDLKGKYFGQPIHRLMGGPVRDKVKAYATGLYRRDRSDHTVYLCEEALESRALGF
                     QAMKLKVGFGVEDDVRAVQAVRDAIGPDIGLMIDANHAYDAVEAIRLGRRIEQFDIGW
                     FEEPVPPEDLDSHLAVKAALSIPIATGECEFTRIGFRTLLERQAADYIQPDLCAAGGL
                     SECKKIADMALAFGVRFAPHVWGTGIAVAAAVQLLSVTAAWTPPSLNPVEPMLEFDRT
                     EHPVRSALLATPIAPVNGYVTVPTGPGLGIEVNRDVLTRFRADT"
     gene            complement(17044..17799)
                     /locus_tag="VHX39_12725"
     CDS             complement(17044..17799)
                     /locus_tag="VHX39_12725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992027.1"
                     /translation="MNQESVQAFVEARGRRPEWSGIAPPLRPSTIEDGYRLQAAIHDR
                     LAAGGDGRVGWKVGCTSATGQGGFGLREPVYAGLLDSGRSLSLAGALSRKLTNPSLEC
                     EIAVVLRRDLDGTDPDIADAIGACHIACEIIDNRYGDAMAVGVPSLIADDFFQVGFVL
                     GTECPEWRGQDLAAATGFIEIDGQRRTGSARDGLSVFDSLRWLAKALARNGLALRAGE
                     IVLTGTLVAPAPVALPARAVSLGVSGFPTLALD"
     gene            complement(17821..18828)
                     /locus_tag="VHX39_12730"
     CDS             complement(17821..18828)
                     /locus_tag="VHX39_12730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX3992028.1"
                     /translation="MKTTRRAMTLGGAAALALGSRRARADAEFSYKIGTSTPAAHPFN
                     KRLQEVGDRIASDSKGRMELHVFPDSQLGGDNDLLSQARSGAIEFCQPTGQILSSILP
                     VTAVSAMGFIFADYSKVWPAMDGDLGRLVRTQITAKAGLVPMERMWDLGFRQITTSNR
                     PVRNAADLEGLKLRTPIAPSLISLFQALKAAPVGMQYGEVYSALQTHIVDGQENPLSQ
                     VEAGKFYEVQKYCSMTNHVWDGYWICCNPDAWHALPPDLQAIVARNFNDVAIDQRVDI
                     AKLNASTRSLLVAKGMVFNDTDPDSFRAQLRAAKFYAEWHGKLGNEAWTLLEKYVGKI
                     G"
     gene            complement(18847..>19341)
                     /locus_tag="VHX39_12735"
     CDS             complement(18847..>19341)
                     /locus_tag="VHX39_12735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX3992029.1"
                     /translation="RFEWRRLWPMLVQTATLSGAILLIVGAATAMAWAITQSGISRGV
                     AAWIVHVPGGAASFLAVSALIFIVLGSVLEGIPAIVLMGPLLFPIAHQLGLNEVHYAV
                     VAVLSMGVGLFSPPFGVGYYVACAIGSCDPEEGLPYIGRYILALLIGLVVVAAVPWLT
                     TVAL"
BASE COUNT         3496 a         6222 c         6026 g         3597 t
ORIGIN      
        1 ccgacgctga tcttccccgg gtcgatcttc ggccgtttgt acagatcgcc cgtcgacgcc
       61 caaagcagcg ccattcgccg cataggccct gtcatactct atcacccgag cgttctccgc
      121 cattgcatcc tgaccgtaaa gccgccccag caaatacagt gtcgtatcga tcgccagcga
      181 caccccgccg ccggtcacaa cgcccgcatc caccacctgt gccgccacgg tccgaaccga
      241 accgccacga ccaagctgtt ccaacggcgc gacagaatct gtctcaaccg catggcgccg
      301 agtcgtggcg caacgcccgt caagcacccc ggaagcaccc aaaatcatcg ccccggtgca
      361 gaccgaggcg accccctccg gccgcaaccc ccgcagaaac gccaggatcg cctcatcggc
      421 cgcggccccc gggccagccc gcatcgccgc agacgatcac cacatcgcat tccggcgccg
      481 catcgattcc atgatcggcc tgcaccgtca gccctccggc caaccgcacc gggccgaccc
      541 gccgggcaac aacggtcgca gcaacgttcg gcggcacccg gcgcgccatc gatatcaccc
      601 cgacggtccc gccgaggtcg atcagctcca cgccctcgta aaccagcacg ccgaacaacg
      661 ccgggtcgga aacctgcttc atacccgcca cacttgctgc cgcccgtcac tctggcacgc
      721 gacccgcacc ccggtcgacc gtcgcccgga tatccccttc acgcaaccgt cgtaaaacgg
      781 taatcgagtg gcaacgcagc atcggtaacg gctgcgaacc aacacaggtg aggaaaccgt
      841 cgatgaagcg ccgcacattg cttgccaccc cgatcgcctt ggcggccacc cgtgtccggg
      901 cggcggagaa gaccaagatc ctctggtggc acgcgatgac cgcggccctg gcggatcagg
      961 tcaaccacat cgccaacggc ttcaacgcca gccagaacga ggtggagatc caggcggtct
     1021 acaaaggcgg ctacgccgac accatgaccg cggtcatcgc cgcatcccga gccggccagg
     1081 cgccgcatct ggtgcagatc ttcgaggtcg gcaccggcac catgctcgcc gcccgcaagg
     1141 cggtgaagcc ggtctgggaa ctggcgaagg aaaccggcct ggcgatcgac ccgaaggcct
     1201 acatccccgc cgtccgcggc tattacagcc tcagcgacgg ccgcatggcg tcgatgccgt
     1261 tcaattcctc gaccgccgtg atgtggtata acaaggacgc gttccgcaag gcgggactcg
     1321 atccggacaa ggcccctgcg acatggcagg aagtccgcaa ggccgccgag acgatcaagg
     1381 caaagaacgc tgccccggtc gcgatgacga cctcctggcc ggtctgggtc cagatggagc
     1441 agtacagcgc gctgcatgat ctgcccttcg ccacgaaatc cgacggcttc gatgggctgg
     1501 atgccgaact gacgttcaac aacaaggggc aggtcaagca catcgaacgg ctgctgcaga
     1561 tgtcgaagga aggcagcttc aaatacgccg gccgcgataa cgctcccgac ccgctgatcg
     1621 tgtccggtga ggccgccatt tcgttcgggt cgtcctcgtc ccgcggcgac ctggtcaaat
     1681 ccgcgaagtt caattgggcg gaggcgtacc ttccctacga tccggacatc atcaagacgc
     1741 ccaagaactc gatcatcggc ggcgccagcc tgtggaccat gacggcgccc ggccggaccc
     1801 aggcggaata caaggcggtg gccgaattcc tgaaatacat cggcaaaccc gacgtggacg
     1861 cgacctggtc gcaaaaaacc ggctatgtgc cggtgacgtt cgccggctac gagctgtcca
     1921 agcagcaggg gttcttcacg aagaatgtcg gcgccgacat tcctgtcgag cagctcgccc
     1981 gcggcaccgt aacgcccaac accaagggcc tccggctcgg ccgcctgccg gaaatccgca
     2041 atatcatcga ggaagaactg gaaaaggccc tgcaaggcgg ccaaagcgcg cagcaagcca
     2101 tggacgtcgc cgtgacccgc ggcaaccggg tgctcaggga gttcgccaag gccgccaagg
     2161 cgtaacgatg gatcgccgca cgatcttcaa cggacgtttg ctgccggtgg cgctgctgct
     2221 gccgcagctt ctgttgacga tcttcttctt ctactggccg gcggggcagg cggtgtggtc
     2281 cagcctgacc actcaggacg ccttcggtca gggctgggtc ttcgtcggta tggacaactt
     2341 cgtcgacctg ttcaccgatc cgttatatgt cgcctccatc atccggacgg tgttcttctg
     2401 cctcgcggtc agcgtgctgg cgatgggcgt cgcgctggca ttggcggtgt tcgccgaccg
     2461 gtccatcgcc ggacgaggcg tctaccgcac gctgctgatc tggccctacg cgattgcacc
     2521 ggcgatgtcg gcggtgctgt tcctgttcgt gctgaatccc cgggtcggcc tgttgggccg
     2581 ctggctgaac gatcacggta tcgcctggga ttacgccctg aacggcaacc aggcgatgct
     2641 gatggtggtg tccgccagcg cgtggaaaca ggtcagctac aacttcatct ttttcctcgc
     2701 cggcctgcag tccatcccac gcgcggtgac cgaggccgcc aggatggacg gcgccaaggg
     2761 ctggcaccgc ttccgcacca tcaccttccc attgctgtcg cccaccacct tcttcctgct
     2821 ggtggtcaac gtggtctatg ccgcattcga cacattcggc acgatctacg cgctgaccca
     2881 gggcggcccg ggacaggaca cccaaacgct ggtgctgaaa gtgtttctag acggcgtgat
     2941 taaccaggat atcggttcat catcggccca atccgtggtg ctgatggtcg gcgtgatcgc
     3001 catcaccgcc gtgcagttcc gcttcatggg acgaaaaacg gtgtcatgaa aaaccggccg
     3061 gactatctcg cccacgcggt cctgatcctc ggcgtcgtgc tgttcgcgct gcccgtatgg
     3121 ctggtattcg ccgggtccac ccaggactct gacgccatca tgcgcggcga cctgtcgctg
     3181 atcccgaatc tcgccaacct gtcggtctac aagcgcgtcc tgctggacgg cacgatgggc
     3241 accgagccgg tctggcacat gctgatgatc tccctcggca tggcgctggc gatcgcatgc
     3301 ggcaagatct tcatctccat cctgtccgcc tacgccgtgg tgttcttccg gtttccattc
     3361 cgccaggtgg cgttctggct gattttcgtg acactgatgc tgccggtgga ggtccgcatc
     3421 atccccacct atgccgtgat ggcggatttc ggcctgatca acaccttcac cggcctgtgg
     3481 gtgccgctga tcgcgtcggc caccgccacg ctgctgtttc gccagatctt caccgccatc
     3541 cccgacgaac tggtggaggc cgcccgtatc gacggcgccg gcccgctgcg cttcctgtgg
     3601 gacatcgtgt tgccggtctc ccgcaccaat atcgccgcgc tgttcgtcat cctgttcgtc
     3661 tacggctgga accaatatct gtggccattg ctggttgcta ccaatcaggg cctggatacg
     3721 atcgtgatcg gcatcgtcaa gatgatcggc gaggacacgc agaccgattg ggccgcggtc
     3781 atggcgaccg ccgtcctggc attgctgccg ccggtcctgg tcgtcgttct gatgcaacgc
     3841 tggttcgtcg ccggcctgac cgaaggcgag aagtagatgg ccaccctgga actgcaaggc
     3901 ttgcgcaaga gtttcgccgc gacgcaggtg ctgcgccaga tcgacctggc gttggccgac
     3961 ggggagatgc tggtgatcgt cggtgcctcc ggctgcggca agtccacctt gctgcgcctg
     4021 gtggcggggt tggagacgcc caccgccggc cgcatcacca tcggcggccg cgacgtgacc
     4081 ggcctggacc ccagcgagcg ggacatcgcc atggtgttcc agaactacgc gctgtatccg
     4141 catatgtcgg ttttcgacaa catggcatac ggcctgcgca tccgcggact gtcccgcggc
     4201 gagatcaccc ggaaggtgga agacgccgcc gcgctgctgg gcctggacgc gctgctggcg
     4261 cgcaagccca gacagctatc gggcggccag cggcagcgcg tggcgatggg ccgggcgatc
     4321 gtccgggacc cgaaactgtt cctgttcgac gaaccgctgt ccaacctgga cgcgaagctg
     4381 cgcgtgcaga tgcgcgccga aatccgccgc ctgcaacggc gcctgggcgt caccagcctg
     4441 tacgtgactc acgaccaggt ggaggcgatg acccttggcg accggctgtt gatcctgcac
     4501 gaaggcacgc cggcgcaact cgccacgccg atggaggtgt tcgagcaccc tgccgacacc
     4561 tatgtcgcgg gatttgtcgg ctccccgacg atgaatttcc tgcccggcca cctggtgcat
     4621 gacggcaccg cggtccaact cgaggccggg ccgctgatcc cgcttcaggg gcggcgttca
     4681 ggtgatgccg tcacactggg catccggccg gagcatctga ccttgggcgg ttccggcctg
     4741 accttgacgg tcgatctgat cgagccactg ggatcggaga cattgctgca tgggcggctg
     4801 cccggccacg acgccgatgc gatgactgtg aaggttgcgg gcgcggtgca ggcaaccgag
     4861 accgttactg tcggcgttca ggccgatcag gcgcatgtgt tcgatgccgg gaccggaaag
     4921 cggatcgatc cctcgggtca ctgaaccggc tacgagacag tcggatggcc gttgatcaaa
     4981 cctgcgtccg tgagggacat gataggataa gcacccggct gactcgcgaa agtggctgaa
     5041 aagcccgatc ccgggttgtt ttcgacattc aaggtgaagt cacctgccgc aagcaacggc
     5101 agcgtcgggc taccgctggg ttgcgaccac ggggctgaga aggcgttgct tgttgtgcct
     5161 tgtgcattca cggagaacgg gtgtgtcccg ccgtccccac cggaaatgaa gcggttcggt
     5221 cccgtcgcgc tgatgccgat ggtcgcggtg gaaatgacgg acgatgccgc atcggttgtg
     5281 cggccgccca ccgtatcggt gtcggcgatg gtgaaattcg tcgtgaccgt ttgacctggc
     5341 gcgacctgac ctgtcgtcgg tttgaaaacc agcccatcca gtgtgtcggt caccgcggcg
     5401 gaggatcctg aaaccgtata gacaccggtc atggcattgt aatggccgcc gcccaggttg
     5461 gtcagcatac cgttcgccgc cgcggacagc gttaccatta cggtttcggt ctggttggca
     5521 ttggcatcgc cgatggtgac gccggagaac ggcgcgatcg ttccgtggtc ggtcgccgcc
     5581 tggcctgctt tggcgccagt gatcgccggc gggttcgcca ggccattcaa ttcggccacg
     5641 atcgccgccg ctgccgccgc ggtgtcgatg tagaccccgg ccgtggcggc gaccgatgtg
     5701 gtgctgtcgg tgacgctgag cccgcttgta tcggtgtcgg taatggtgaa gccggtggtg
     5761 acggccttat cgggggcgac gtctgccggc gtgaaaacca gcccgtcgag cgcggtcgtg
     5821 atcgcggcag ccgaaccggt gacggtatag acgccggtcg ctgcgttgta gctgccaccg
     5881 tcaaggttgg tcagcgtgcc agttccggcc gctgatggcg tgaccgtcac ggtttcggtc
     5941 tgggcggcat tgggatcact gatcagcacg ttggcgaaag gtgcgaccgt cgtttggccg
     6001 gtcacaccct ggccggcctc ggtaccgctg atggccaatg gctccgcgac agccgtggcg
     6061 atgaccgatg tggtggcgtc ggtatcgcga accccatcgg tgttcatatc ggtgatggtg
     6121 aatccggtgg taacggtctg ccccgggggg acttgacccg gtgccgggtt gaacaccaat
     6181 ccgtcgacgg cggtggtgac cgcggcagca gacccgttca ccgtgtacac gccgctcgcc
     6241 gcatcataac tgccgctgct aaggttggtc agcgttccgt tcgcggccga ggagagtgta
     6301 accgttgcga attcgctctg gccggcggtg ggatccgaga tcacgacggc ggagaacggt
     6361 gcgatcgtcg cttggccagt caccgactgg gcggcttcgg taccgacgat gatcggcgcc
     6421 gcggcccccg cgccgcctgg cgaaaggtaa tcaatctgtg gcgggaatga tcctgaacca
     6481 tctgagacag cataggtgta gctgatcgtg accgtggcgc cggcctcggt cagcaattcg
     6541 gccgccaagt cagcggggcc ggtcagaact gaggggctgt tggcagcgat tggcagtgcg
     6601 atcgtgccgg aaccgataaa ggctgacagg ttgccggtaa cgtccgacga ggtgacctcg
     6661 gtacccgtca ggctggtcag attctctccc gaggcgccgg cgaaatcgat cgtcccgtcg
     6721 aatgcggcca ggttcgtggc actgttgatg gacgggtcgg ccgcggcaac accgaggtcg
     6781 ttcggcaggg tcaatgtgat gtcggccgtc tcggtcaggc cgatcgaggt tgatgtcgat
     6841 ccgagattct ccgcagcaag accggcattg atgtcgccgg tgattgtcag gttgaccgac
     6901 agcagtgcgc caagcgcggg attgaactgg ttggctgtga cgatggtatt ccaatcggtc
     6961 gtgcggtcgc tgacggccag tgtctgcggc acggtcgtcc gtgtcacaga gggttcgtac
     7021 ggcaagctgc cgattccgac agtggaagaa aaattgctgc tatactcacc ggagctatcg
     7081 gagccatttg ccgacggctg gtaattgtac tgcacattca ccgtggcgcc ggcctcgccc
     7141 tgggtgaggc ccagcagatt gccgtcggcg tacaggcgtg aacttacctg gctgtgcgcg
     7201 gtcagatcga tcgacccggt ccccacgaaa gccgcgccgg ttcccgggct tggaatatag
     7261 tccgaaacga cggttgccac gctggaaaac tccgacacca ccgtacccga agtgccgatg
     7321 aagtcggctg ttccgtcgta cgccgccagg ttgagcgtcg agctcgcttc cggactgact
     7381 gacgccaacc tggtgccgtc gggcgcggtg acatcgatgg tgctcggcag gtcgatttgc
     7441 agggtggccg cggtcgcacc gagattctgg atcgccgcgg taccggtgac gtcacccacg
     7501 atgcccacat cgatgtcggc cagcgtgccg agcgaggggt cgaactggtt gaagctaagc
     7561 ggaacattcc agccaggcgc ggaatcggca acggtttggg tctggaggat cgtcggctcg
     7621 gtcgtcataa caatcctcta cgctcgttac cctttggcta ccatacgaac tagatcggca
     7681 caataagaca acgttttttg tcttgctgat gtcatctcat gaagaaggtc gtttcgctac
     7741 ccatagtagc aaaaccccgt catgccgcaa ctcagtcgtg gacgccacga cgcctgacgg
     7801 aaaatcagaa acaggatcaa gctatgtaac gttctgcatc ttccacgaga agaaatcgat
     7861 cgttcaacaa cttacctatt actgtatgca gcgcgtcggc ataagccgtt ccgggatatc
     7921 gaaccgccag ggatgcccgg ggatcatccc cctgttccga ctcggtcgcc gcgaacggca
     7981 ggaatgtacc ctcgcggtcg gcaagctcac cggcaggata ggggggtctg tacaggttcc
     8041 agccagtgaa cgtgccacgc ggaaccgcga tatccggcag ccggataccg gcgatctcat
     8101 tgccgtcggc atcgacctgg ggcaccagcg tgacgtaggc acgtgccggt ggcttcggat
     8161 cggtccaatc ctccagcggc gccgcatcgt tcgccgcgtg cggccgaacc agcccgggaa
     8221 tcgccgggaa ggcgacggct gccgcggcta ccagtgtccc atcgacgatc cgcggtatgc
     8281 ggctgtccgg cggcaaccgt cccgacgtca cccatgcatc cagcgccacc agcagcgcgc
     8341 gaaccgccgg catcgggtca tgccagtttc gaggattgat gcacggtcca ttatcccgag
     8401 gcatccccgc cttgccgcca tgctgcgtcc ccggcagcaa atatgtccgc acattcgccg
     8461 ggggcgcgat atccctggtt ccgagcggat cggagtgcag cagcgacgcg cccttctgcc
     8521 agtattccgt ggcggtgttg gtctcgatca tcaacggatc ggtcgcgtcg ccgcgcagca
     8581 gggcgccgct gtcgccggta atcggatcgt ccatcgcggc ggcggaatga gggaactgca
     8641 cttcaggaaa atcgtgatcc tcatgccagg tccgcgtacg gaacggttgg ccgaacggcg
     8701 tgttgtggaa cacccgcccg atacccgcca catgcgtgaa cacgccgtcg aacacgcggc
     8761 gcccatcctc atcgccgttg aagccctggg caatatggtc gcgtaagtaa cgacccgcct
     8821 gggaaatccc gaaagccagc gtatgttcga ccggccgccc catcagttcg gtgccgtggt
     8881 gccgcagatg actgatgatg tcccgcgtcg ccgcatggcc gatccccagc acccgaggct
     8941 tcgtcgcctg atagcggact tcatagatcg atccggtctc gatcggcccg accggcttca
     9001 ctgagcgggt gtccaccatc tcggatggca ccgggacgcg cggcccggtc tgcgtccgcc
     9061 gcactgacac gctcgccggc ccaacagcct cgtaagccag tttgaacacg tcatgcacgc
     9121 caagccgcgt gcccgaaacg aattcctccc ggatggcctt cgtcaccccg ttgatcacgg
     9181 gcacatccag cgacaaacct gtcgtctttg gtgcgccagg gtcccagcct gtccatagca
     9241 gggaaaaccc tagccgcagc ggcagcgcat tgcccaaatc gtccgccgtc gcgggctggt
     9301 tgccggcggc cccggcgcat aaattggcga acaacatgat ccggccgcga ttgttcactt
     9361 cgtacaacaa ccgaccgttg cctttcgccg catccgccgg acgcagcagc acgaagccac
     9421 tgcggtattc gaccaggccg ccggcgttgc gcggcgcctt gtccagcagc gcgatccccc
     9481 ggttgctcgg gtgcgatggg tccaacgcac cgatggcgat accatcgatt cgttcatagg
     9541 cgcctgcggc cccgaatgtc gcgcccccga cgaacggcag gcggctctta atttcgatat
     9601 cggtgatcat gaccagtgca actccgcttc gctgcgttcc tgcaattctt cccgcgtcat
     9661 tcccgggatc atgtccagca cgacgaaacc acgcggcgtg atctccagca ccgcgaggtc
     9721 cgtgtagaca cggcgcacca cgcctttcgc ggtcagcgga taagaacacg cccgccggat
     9781 acgggacccg ccatggccct tggtgatgtg ctccatcgcg acccacagcc gttttgcgcc
     9841 gatcgccaaa tccatcgcac cgccgacctg cttcactggt tcatcgggtg aacgcgccca
     9901 gttcgcgatg tcgccatttt ccgccacctc gaatgccccc agcacgcaaa gatcgaggtg
     9961 tccgccgcgt gcgatggcga aactgtcggc gtgatggaca aaggaaccgc cggtacgcaa
    10021 cgtgatgtgt tgcgtgcccg cattgaccag gtatggattg atcttatcgg gggccggggc
    10081 tggaccggcg ccgatcaccc cgttctcgga atgaaaaatc acctcacgat cgtttggaac
    10141 gtgatccgat acgccggtgg ggatgccaat gccgagattg acaaaccagc cttcggggat
    10201 gtcccgcgcg atacgggctg cgataccggt tcggtccagt ggacggaatg tcatgatggt
    10261 ttccttcacg ctggaacatg cacgacgcgg tgtacgaaga caccgggcgt gtggacattg
    10321 gcgggcggaa tatcgccgag cggaacgata tgatgggttt gaacgatggt tagcctggct
    10381 gccatcgcca tcaccgggtt gaaattcctg gcactctcgc gatgggtgag gttgccccag
    10441 cgatcggcct cccaggcatc caccagggcg acatcgccgg gcagcggata ttccagcaga
    10501 cagttacggc cgttgatgac gcgggtttcg cgcccctcgg ccagcagcgt gtcggcgccg
    10561 gtgggtgtgt agaacgcctg cacgccggca cccgccgcac gcagtcgctc cgccagcgtg
    10621 ccctgcggaa cgatctccag ttccagcttg cccgcggcga acaggcggcc ggcgacgctg
    10681 tcggccctga cgaagctgca gatcagtttc cggcattggc cggacgccag gatatcggcg
    10741 gtcggcccgg tgtcccggcc accggaattg accaccaggg tcaaatcccg agcgccttgc
    10801 gcgatcaggc ccttcaccag ggcttccggt gtgccattgc cgaagccggg cagcaggatg
    10861 acggcgccgt ccgcgatgcc ggccagcgcg gccgccacat cgggcacgaa tttatcgatc
    10921 attcgacggt tgttcctcgg actctggacg ctattggatg cgtatctgag cgcggtttca
    10981 tcccactggc aacggatcga taccgccgac acgggcgcct ggcgatcgct cggcaccgga
    11041 ccaggccgtc aatcatcatt gccgccagcg gcttcgtcga tagtactgca acggcttcat
    11101 tcccgggctg gcgcacccgg aacccgttgt gttgttcggg tcggccggtg aacatgataa
    11161 ggcagcatga aaattctccg tttcgatgcg aggctgggat atcttgctac acaggcgaac
    11221 ggtgggctat tcgtgaagat caaacaggga aattgctcaa gaatatgatt cttacgcgtg
    11281 gagatggtga aataatcgcc ttgcccatcg ttctggacat cgcgcctctt atcggggcga
    11341 agctgatgtt ggcagactct ctgaccatca aggatttgtt gaagcgggcg gccaggcagg
    11401 gcgtgcgcaa gcctgtcgcc gatccattga attttgcggt ctgatcgcaa atgcccaaat
    11461 cccgcaaggc ggtcaggtcg gcagatcatg cttcgcgatt ggcttctgcg cctttaccgg
    11521 atcgtccggt tctgccgcgc gggcgcatgt ttggcagtgt gcttgacctg gttggcggca
    11581 caccggtggt tcggttaccc cggctgcagg cggctgacaa tctggtcgcc gacatcgcgc
    11641 tcaagcttga attcttcaat ccccttgggt cggtgaagga tcgcatcggc ctcgccatgg
    11701 tcgaagcggc cgaacaggcg ggtgagattg cccctggcac taccacgatc gtggagccga
    11761 cgtccgggaa caccggtatt gcgctcgctt tcgtcgccgc cgcgaagggc tacaaactca
    11821 tcgtcgtcat gcccgaaggc gcttcggtgg agcggcgcaa gttgcttcgt ttgttgggcg
    11881 cccacgtgga aacgacgccc gcgaagttgg gcatgccggg tgcgattgcc cgggcggatg
    11941 ccatatttgc ccgcaccagc gacgcctgga tcgccaggca gttcgataac cccgcgaatc
    12001 ccgcagcgca tcaggcgacg accgccgagg agatctgggc ggataccggg ggcaccgtcg
    12061 atatcgtcgt cggcggtgtg ggaaccggag gcacgctgac gggcatcgca cgcggcttga
    12121 agccgcgccg ccccggcctg ctggttgtcg gcgtggagcc tcaggaaagc gcggtgctgt
    12181 cgggagatag tcctggaccg catcgcattc agggtatcgg cgccggcttt actccggcgg
    12241 tgctggaccg tgacttgttg gatgaggttg tggcggtgtc cgaagccgaa tccttcgccg
    12301 ccgcccgtcg ttgcgcggcc gtcgagggat tgccggtcgg gatatcctcc ggcgctgtgc
    12361 tgcacgcgat gatcggcctc gctggccgga aggaaaacgc cggcaaactg atcgtcggga
    12421 tcgccgcgtc gtttgctgaa cgttacttgt ccacgccgct gttcgcagga ctgtagagcg
    12481 ggcgccgggg gtggacttcg ccgtcatctc cgctgcctgc ggcaacacga tcgcgtcttg
    12541 ccggccgtgg atgttcaagg tcggcacacg caccttcgcc agggccgcga tcgtttcggc
    12601 ggggtcgcgt actccggtct gaatgcggat caggtttagc tgtttttcgg tgagcattcc
    12661 gttcgggcgt atctgaacgg tccaaatacg taatgaaacc gtggtgtccc ttcaatagac
    12721 agcgtggcga acgtactgga tgcggcttgc gttgagcccg gagacgctcg accatcatcc
    12781 gggtggacgg tgttatcggc agtacgacga gcgtctaaag accttccagc gtgtaatcgt
    12841 ggtcgtgcag caccacgcgg cgctggaacc gccattggcc gccgatcttc cgtagttcgc
    12901 agtcgtaacg gccaggggcg agaagtctgc tcttgccgtc cttggtcagg aacactgtca
    12961 ggtagcaggt cgcatgcgca cggttgccgt ccaccgtcat catcaggttg gacagcacat
    13021 gccgcaattg cgacccgccg gcctgaaaac gagcgaaacg atgcgcgaac gcggtgatgg
    13081 cggcgcgtcc ggtgtgctca cccacggcgg ggctgaccaa ggttccgtct tcggcgaagc
    13141 agtcaatgac ggtgtcggta tcgcccgcgt cgagcgcaca ggtatagcgc acgaacagat
    13201 cgttgatgcc gaaccggtcc tcgatcgaag gcgatgccat ttcgtttcct ccggtcctaa
    13261 tggttcaaat cggatggaca gtgccatcca atttgaaccg ctgctctttg attttgtcgg
    13321 ccgacccacc cgaccgcacg ggatgctagg tcagcttatc aggccggaac ccgatgatct
    13381 gctcgaatcg gtcggaatag cggtcccaga tctcggggtt caccagcctg ggcggcacgc
    13441 gaccgcgcag cagcgcgatc cattgttcgg cggcggcgat cgacatgtcg tacaacgtct
    13501 cgatcgtgac gccggcgata tgaggggtcg ccatcaccgt atcgaggtgc agcagcggat
    13561 ggtctggcgg cggcggttcg acatcgaaca cgtcgatgcc cgcgccggcg atgcggccag
    13621 ccttcagggc ctctaccagt gggccttcct cgtggatctt gccacgtgcg gtgttgatga
    13681 aataggcgtt cggcttcatc gcggcgaagg ccagggcgtt gaacataccg acggtttcgc
    13741 tgttgcgcgg acaatgcacg gtgatgaagt cggattcggc cagcaatgtc gcaaaatcca
    13801 ctttttgcgc gccgcgttcc gcgacctgct gttcggtcag atacgggtcg cacgccagca
    13861 cgcgcatgtc gaatgcgttg gcatatttcg cggtcagtcg cccgatctga ccgatgccaa
    13921 cgatgccgac cgtcttgccc ttgatgttgt ggcctgacag cttcatccgg tcggtggccg
    13981 tgccgttcat catcgcccgg tgagtgtagc cgaccttctt ggtcagaccc agcatcaagg
    14041 cgatggcatg ttcggctacg ggttcgctgt tggtgccgga ttggttgacg acgatgacgc
    14101 cggcggcgtt gcaggcatcg acatcgatca cgtcgaagcc ggcgccggcc gaggacatgg
    14161 ccagcatgtt cgggcaacgc gccagcagcg cggcattgcc gaaccagggt tccttcagtt
    14221 cggtgcgggc actgacctgg tagccgacgg cggtttccag cggtgtccag ttgtcggcct
    14281 gggggtcggt gtattgcaga caggtcagtt cgatatcatc ctgttcactg agaacccgtt
    14341 ccgcgatcgg gtcgaaccag cgctcgaaat aaaccagtcg cttacgattg agtgccatcg
    14401 gtagcgtttt cctcctgtcc caaccctcgt cgggctgata ttgtcatact aatcggggag
    14461 cagaggtgtc aacgaagcgc ggacggtgcg tccacgcatc gaggcgctat ccagggtttt
    14521 ggctatgtcg tgccggtcga gggtgcccgc gcgcgaatct ctgaggacga agtatcgagg
    14581 cggaaacggt gctcgggaat tgcggtgaaa agaccggcat aacgcgacgg tatggcgatg
    14641 tcgctcagcg tgcgtacacg ccccgctgtg tcgacgcgca ccgccaccag aaagctgcat
    14701 ccggcattgg cgatttccgc cagcgcggcg tccatgcgat cctcatcatc gccgtaatat
    14761 cttcgcgcga ccaatcgctc cgccgtatca gcgccgatca cgaacgtagc cccgggaaac
    14821 aagcgtgact tgtcgaggaa agtaggcgct cgggtgagtt cgaccggccg cttccctgcg
    14881 aattgcgcga tccggtgtct caccgtctcg cctgtcagcg gcggtttgtc gacgttggcg
    14941 accgagattt cgaatgtcgc gggctgctgc ctgatttctt ccgcggccct tgcaagcgat
    15001 acatgtccat catgcaccgg gttgaaggaa cctggcagca ccagaagggg aagcggcgct
    15061 gacagcatca tttggccatc ggcctggacg gtgacgcgat cgaccttgcc ggccaggagt
    15121 tgatcgatgg gatcgagagc ggcggtcacc gtctccgtaa acgtttcatc cgcatcgagc
    15181 aggctgtttg gcaacggtgc ggcgatcccg catgcgcggg ccagccacag gacgatcgca
    15241 cgcgaaacga gatcttcctc ccccgcacga tcacgccggc cttttgccat cacgccagtg
    15301 cagtatgtga tgcgttcgga atcggcaatc gcgatgtgaa atcgatgctc gccccggcgc
    15361 gggcgatcac tcaccaatgc cgccgttgcc ccgagaccga gtgcatcggt gcccaccggc
    15421 atcagcgtgg ccgcgcgtgc ctgcgcggtg cgtgccatcg cgatggcggt gtcggaactg
    15481 gacgcctgcg caggggcgaa gccgagaaac gccgccagcg ccagcgcgtc gtagggtacc
    15541 agcgcctcga tcagcaggcg ggagccgccc ggaacacgca gcaattcgcc gatcgccccg
    15601 gtgccacccc cggtgatcgc gagtatggcc ttgcggccgg aggcgtgtgt cgctgcgatc
    15661 aattgatgcc acgctgcgtc cgacggtctc atggtgcgtg tggtgtccga agttgaaatt
    15721 gtgccatgga tgctgaaaga cagcccgggc agagtcaacg gcgtgatggc ggtatagtcc
    15781 tgctcgttga tcccctttgt gcagccggcg gcgtcggccg gcaccgtggt tgcgacttcc
    15841 aggcgcatgg taatatgatt tgacccttcg ccagggatat tcccgcaggg gaacggggcc
    15901 accatgaaga tcatcgatgt ccgggctcat gttttggaag cgcaacttgc gcagccgttt
    15961 gcgtattcac gcatgtggta cgcgaaacga atgtcgatga tcgtcgaaat catcaccgat
    16021 gacggtctca ccggctgggg agaatgttac ggtcccgccc gtatcaacgc cgccgtggtg
    16081 aaggaacttg gatcgtttct gattgggcag gatccggttc ggagcgaatt cctgtggcac
    16141 gaactctatg cgcgctatcg cgaccacgga cagaaaggcg tcgtcatcca aggactcagc
    16201 gggatcgaca tcgcgctgtg ggacttgaag ggcaagtatt tcggccagcc gatccaccgg
    16261 ctgatgggcg gcccggtgcg tgacaaggtc aaggcctatg ccaccggcct ctaccgtcgc
    16321 gaccgctccg accacacggt ctatctgtgt gaggaagccc tggaatcccg cgcgctcggc
    16381 ttccaggcga tgaagctgaa ggtcggcttc ggcgtggagg acgacgtgcg cgcggtgcag
    16441 gcagtgcgcg acgcaattgg tccggacatc ggccttatga tcgacgccaa ccacgcctac
    16501 gacgccgtgg aggcgatccg cttgggccgc cggatcgaac aattcgacat cggctggttc
    16561 gaggaaccgg tgcctcccga ggacctcgat agtcatctgg cagtaaaagc ggcgttgtcg
    16621 atccctatcg ccaccggtga gtgcgaattc acccggatcg gctttcggac cctgctggaa
    16681 cgccaggcgg cggactacat ccagcccgat ctgtgcgccg ccggcggtct gtccgaatgc
    16741 aagaaaatcg ctgatatggc actggccttc ggtgtccggt tcgctccgca tgtctggggc
    16801 accggcatcg ctgtcgccgc cgcggtgcaa ttgctgtcag tgaccgctgc ctggactccg
    16861 ccctccctga atccggtgga accgatgctg gaattcgacc gcaccgaaca cccggtgcgc
    16921 agcgctctgc tggcgacgcc gatcgcgccg gtcaacggct acgtaacggt ccccaccgga
    16981 cccggcctgg ggatcgaggt gaatcgcgat gtgctgacgc ggttccgggc tgacacctag
    17041 cccctagtca agcgccaaag tcgggaaccc gctaacgccc aaggacactg cacgcgccgg
    17101 cagcgcaacc ggggcagggg ccaccagtgt gccagtcagc acgatttccc ccgcacgcaa
    17161 tgcaagccca ttacgcgcca gcgccttcgc cagccaacgc aacgagtcaa agacgctcag
    17221 cccatcccgc gccgacccgg tcctgcgctg gccgtcgatc tcgatgaacc cggtcgcggc
    17281 cgccagatcc tgcccgcgcc actctgggca ttccgtcccc aaaacaaacc cgacctggaa
    17341 aaaatcatcg gcaatcaggc tcggtactcc aaccgccatt gcgtcgccat aacggttgtc
    17401 aatgatctcg cacgcgatgt ggcaggcgcc gatcgcatcc gcgatgtccg ggtcagtgcc
    17461 gtccaggtcg cgccgtaaca ccaccgcgat ctcgcattca agcgatggat tggtcagttt
    17521 ccggcttagt gcaccggcca gcgacagcga tcgtccgctg tcgagcaacc ccgcatagac
    17581 cggttcacgc aggccgaaac cgccttggcc agtggccgac gtgcatccga ccttccaccc
    17641 cacccggcca tcgccccccg cggcgagccg gtcgtgaatg gcggcctgca aacggtagcc
    17701 atcctcgatc gtcgaggggc gaagcggcgg ggcgatcccg gaccattccg gccggcgacc
    17761 gcgcgcctcg acgaacgctt gcacactttc ctgattcatg aacttgcccc gcatagcccg
    17821 tcagccaatt ttcccgacat atttttccag cagcgtccaa gcctcattac ccagtttgcc
    17881 gtgccactcg gcatagaact tcgccgcacg caactgggcc cggaaactat ctggatcggt
    17941 atcgttgaac accatcccct tggcgaccag caagctcctt gtcgacgcgt tcaacttggc
    18001 gatatcgacc cgctgatcga tcgccacatc gttgaaattc ctcgcaacga tcgcctgcag
    18061 atccggcggc agcgcatgcc acgcatcggg attgcagcag atccagtaac catcccacac
    18121 atggttggtc atggaacagt atttctgcac ttcgtagaac ttgccagcct caacctgcga
    18181 caacggattt tcctgtccgt ccacgatatg cgtctgcagt gccgagtaga cctcgccgta
    18241 ctgcatcccc accggcgccg ccttcagcgc ctggaacagg ctgatcaggc tgggcgcgat
    18301 cggtgtgcgc aacttcagcc cttccaggtc ggcggcattc cgcaccggcc ggttgctggt
    18361 ggtgatctgc cggaaaccca ggtcccacat ccgctccatc ggtaccagcc cggccttggc
    18421 agtgatctga gtccgaacca gccgacccag atcgccatcc atagccggcc ataccttgct
    18481 gtagtcggcg aagatgaacc ccatcgcgct gaccgctgtc accggcagga tcgacgacag
    18541 gatctgcccc gtgggctggc agaattcgat cgcgccgctg cgtgcctggg acaacaggtc
    18601 gttgtcaccg cccaactgac tgtccgggaa gacgtgcaac tccatccgtc ccttgctgtc
    18661 gctggcgata cgatcgccca cctcctgcag ccgtttgttg aacggatgcg cggccggcgt
    18721 gctggtgccg atcttgtagg aaaattccgc atcggcccga gcgcggcgcg atcccagtgc
    18781 cagggccgct gcaccaccca gggtcatggc ccgtcgtgtt gttttcattg tttcgtttcc
    18841 acttgtttat aatgcaacgg tcgtcagcca gggaacggcg gccaccacga ccagcccgat
    18901 cagcaaggcc aggatgtagc ggccgatata cggcagccct tcctccggat cgcaggaccc
    18961 gatcgcacag gcgacgtagt agccaacgcc gaacggcggc gagaacagcc cgacgcccat
    19021 gctgagcacc gcgaccacgg cgtaatgcac ctcgttcagc ccaagctgat gcgcgatcgg
    19081 aaacagcaac ggccccatca gcacgatcgc cggaatgcct tccagcacgc tgcccagcac
    19141 gatgaaaatc agtgccgaca ccgccaggaa cgatgccgcc ccgcccggca catgaacgat
    19201 ccaggccgcc acccctcgcg agatgccgga ctgggtgatc gcccaggcca tcgccgtcgc
    19261 ggcccctacg atcagcagga tggcgcccga cagggtggca gtctgcacca gcatcggcca
    19321 cagccggcgc cattcgaacc g
//
LOCUS       DATAVD010000673         2253 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1924740, whole genome shotgun sequence.
ACCESSION   DATAVD010000673 DATAVD010000000
VERSION     DATAVD010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1924740"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VHX39_12740"
     CDS             <1..282
                     /locus_tag="VHX39_12740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992030.1"
                     /translation="LLDVLKKRASHLGGDAAGRFLRAIGKPAFIATTDMVAALVREGV
                     IDRPPGGKRDLAAVQAAFNQWSGESGRDLTAISRVLAMSIESEGHAPRH"
     gene            complement(317..607)
                     /locus_tag="VHX39_12745"
     CDS             complement(317..607)
                     /locus_tag="VHX39_12745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HEX3992031.1"
                     /translation="MLRKTMHPGRILREEYMEPMRLDTDGLAEALGVSSGRLEPIISR
                     MEPVTSDIALRLAKCFHTSPQFWLGLQTAYDLSMAHAMFGAEIEAQVRQLAA"
     gene            complement(692..1180)
                     /locus_tag="VHX39_12750"
     CDS             complement(692..1180)
                     /locus_tag="VHX39_12750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008942760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX3992032.1"
                     /translation="MTGFDPANHRMIPEQRWFEDFVLGERFLLPSRTMTEGVFTAFQG
                     ASGDNHPVHYDVEYCKARGMPGLLAHGFQSLIQTAPGAGLFPFMVEDSLAGFIEQSSR
                     FLKPVFAGDTLYPALQLDELTPGRSTGVVGFASTVHNQNGVLVLEGRQRYLIRQRPVV
                     GA"
     gene            complement(1177..>2253)
                     /locus_tag="VHX39_12755"
     CDS             complement(1177..>2253)
                     /locus_tag="VHX39_12755"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX3992033.1"
                     /translation="VIKVERPGGGDFARDYDNYVNGICSHFIWLNRGKRSVTLDVKNP
                     SGREILTKLIAGADVLLQNLAPGAAARLGLSYEALAHPKLVVCDISGYGESGPMVQKK
                     AYDLLIQAESGLISVTGSPDEPSRVGISIADIATGMYAVTGIMAALLRRARTGEGANV
                     KVAMIDALGEWMTYPMLRHAYAGTPPPRSPTRHPAIAPYGSHRTKDGSIIFGLQNERE
                     WVTFCTHVLERPDVATDPLFGTQHARRENRDSLTALIEDFFSTMTSAEVAALLERHGI
                     ANGRLNDPLAAWNHEQFAARDKWREIMTENGPVRALLPPFQFADFEAVMGDVPSIGQH
                     TDQVLSELGYGAAEIAAMHAAGAV"
BASE COUNT          429 a          703 c          702 g          419 t
ORIGIN      
        1 ttgctcgatg tcctcaagaa gcgcgccagt catctcggag gcgatgccgc aggacggttt
       61 ctccgcgcca tcggcaagcc tgccttcatt gccaccaccg acatggtggc agctttggtc
      121 cgggaaggcg tgatcgaccg ccctcccggt ggcaagcgcg acctggcggc ggtacaggcc
      181 gccttcaacc agtggtcggg ggaatcaggg cgcgatctga cggcgatcag tcgtgtgctc
      241 gcgatgagta tcgaaagcga gggtcacgcc ccgcggcact aagtcgacgc ggttaagcaa
      301 cgacgagacg gggacgttac gccgccagtt gccgcacctg cgcctcgatc tcggcgccga
      361 acatggcatg cgccatcgac agatcgtagg ccgtctgcaa cccgagccag aattgcgggc
      421 tggtgtggaa gcactttgcc aatcgcagcg cgatgtcgga ggtcaccggt tccatgcggg
      481 aaataatcgg ctcgagacga ccggaggaca cacccagagc ctcggccagg ccgtcggtgt
      541 cgaggcgcat cggttccata tactcctcgc ggaggatacg gccgggatgc atcgtcttgc
      601 gtagcatgtt gaacccacga tcgtgatgat gcggtgcaac atgggggtga cctgtgtcac
      661 gattgtggca agatcggacc aattgtgagg tttatgcgcc caccaccggg cgttgccgaa
      721 tgaggtagcg ctgccgcccc tccagcacca ggacgccgtt ctgattgtgc accgtggaag
      781 caaacccgac gaccccggtg ctccgtcccg gcgtcagttc gtcgagctgc agagccggat
      841 acaacgtgtc cccggcgaac accggcttca ggaagcggct ggattgttcg atgaagccgg
      901 cgagcgagtc ctcgaccata aaagggaaca ggcccgcccc cggcgccgtt tggatcagcg
      961 actggaagcc gtgcgccagc aaaccgggca tcccacgggc cttgcaatat tcgacatcat
     1021 aatgcaccgg atgattgtct ccactcgctc cctggaacgc cgtaaacacc ccttccgtca
     1081 tcgttcgact gggcagcaag aaccgctcgc cgaggacaaa atcctcgaac cagcgttgct
     1141 ctgggatcat tcggtggttg gcaggatcga agccggtcat accgccccgg ccgcatgcat
     1201 cgcggcaatt tccgccgctc catagccaag ctctgacagc acctgatcgg tgtgttggcc
     1261 gatcgagggg acatcgccca ttacggcctc gaaatcagcg aactggaagg gcggcagcaa
     1321 tgcgcggacc ggaccattct cggtcatgat ctcgcgccat ttgtcacgcg cggcgaactg
     1381 ttcatggttc caggccgcca gcggatcgtt cagcctgccg ttggcgatgc cgtggcgctc
     1441 caacaatgcc gccacctcgg ccgaggtcat ggtgctgaag aagtcttcta tcagtgccgt
     1501 cagggaatcg cggttttcgc gccttgcgtg ctgggtgccg aacagcggat cggtcgccac
     1561 gtcggggcgt tcaagtacgt gcgtgcaaaa cgtgacccat tcgcgttcgt tctgcaatcc
     1621 aaaaataatc gacccgtctt tggtccgatg cgagccgtac ggcgcaatcg ccggatgccg
     1681 cgtgggcgag cgcggtggtg gcgtaccggc gtaagcgtgg cgcagcatcg gataggtcat
     1741 ccattcgccc aacgcatcga tcatggcaac tttgacgttg gcaccctcgc cggtgcgggc
     1801 acggcgcagc aaggcggcca tgatcccggt cacggcgtac attccggtcg cgatgtcggc
     1861 gatggaaata ccgacccgtg acggctcgtc cggggaaccg gtgacactga tcagtcctga
     1921 ttcggcctgt atcagcagat cgtacgcttt cttttgcacc atcggcccgg actcgccgta
     1981 accggagatg tcacaaacca cgagtttcgg gtgggccagc gcctcgtagc tgaggccaag
     2041 gcgcgccgca gcgcccggcg ccagattttg caacagcacg tcggcgccgg cgatcagctt
     2101 cgtcaggatc tcccgccccg aggggttttt cacgtccaat gtgacgctgc gtttgccgcg
     2161 gttgagccaa atgaaatgac tgcaaatccc gttgacgtag ttgtcatagt cgcgggcgaa
     2221 atcgccgccg ccgggtcgct cgaccttgat cac
//
LOCUS       DATAVD010000674         4811 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_810330, whole genome shotgun sequence.
ACCESSION   DATAVD010000674 DATAVD010000000
VERSION     DATAVD010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4811
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_810330"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..1052)
                     /locus_tag="VHX39_12760"
     CDS             complement(153..1052)
                     /locus_tag="VHX39_12760"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX3992034.1"
                     /translation="MSIAPGRFDYAPITQRPVIKWPGNARVAFWVAPNMEFFEYLPQS
                     RPTQPDIPTYSRMDYGNRVGFWRMLDVLNKHKVRACCCLNLEILDHFPEIKDAMIASD
                     WDYMAHGLYNSRPIYDYTEQQEREYWQDFITHLQRMTGKRLKGRLGGGAGYTVRTDDL
                     MAEAGCLYHTSWIIDDQPWPINVRGGQKFIYVPYTGQTNDAGMLAWNREADYFLQMIK
                     DQFDTLYREGAESGRVMCLSLHPHNIGRPNAAKYLDQALAYILGHDGVWNTTADDIAE
                     YYLANHYDHVASWIAAQKVGTAT"
     gene            complement(1082..2011)
                     /locus_tag="VHX39_12765"
     CDS             complement(1082..2011)
                     /locus_tag="VHX39_12765"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX3992035.1"
                     /translation="MPATRSYGMDQDIYPWSPIVTRPVLQWPDNARVALAVIVNLEHW
                     DWEVPAGTPLPVTPMGGPEGLWTGNQPMFPDIGGYGNHEYGNRVGIFRILAVLDKYGI
                     RPTLALDKVIADHYPFLVNEGLQRNAEFIAHGLSRRQIIHIGMSVDEERAYIRASIAA
                     VERATGKRPTGWSGPDFQETQNTPNLLAAEGIRYVCDWGNDEQPYAMTPQSGELYSLG
                     VNAYLDDNFIHLHGRRTINEVNLLWRDWFDGLYSDGATTGRLMVLHLHPWIMGQPWRI
                     RHLDQVLCHICAHQGVWRATGGEIVDWFKAHRG"
     gene            complement(2124..2582)
                     /locus_tag="VHX39_12770"
     CDS             complement(2124..2582)
                     /locus_tag="VHX39_12770"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3992036.1"
                     /translation="MKTRRGLEIRAATSADAPGLCELLSASGHATLPRSLADRLDAIR
                     QAPGTALLAAEWGPPSGLVVMHWYPTIDGDHPAAQITTLLVAPEARRRGIGRLLVKAA
                     SQAARVAGCGALELLVAPEQPDLQQFCRATGFTEAGVCFMRPLRKSGLRL"
     gene            3111..3749
                     /locus_tag="VHX39_12775"
     CDS             3111..3749
                     /locus_tag="VHX39_12775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992037.1"
                     /translation="MNYTVQHLYTLSVDRICDLDWSGITEEEFIDVAWAYYYFSIQFR
                     ENLTIACEMFPHDSKLQQLEREECATDNLSPWPGVAARGEKMNHDEFMRRLLQLTPIS
                     DQKRWDFEEAGERYLAKVRATDDLTRAVSIASYEDGGLERVFRAFLQAPEWNNPALNA
                     FRHFLSEHIRFDNDPDQGHGALARHLTPDDRILPLWLGFERLLVTFVPTLLP"
     gene            complement(3762..>4811)
                     /locus_tag="VHX39_12780"
     CDS             complement(3762..>4811)
                     /locus_tag="VHX39_12780"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03860.1"
                     /note="This protein belongs to a clade of FMN-dependent
                     monooxygenases, within a broader family of
                     flavin-dependent oxidoreductases, the luciferase-like
                     monooxygenase (LMM) family, some of whose members use
                     coenzyme F420 rather than FMN; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NtaA/DmoA family FMN-dependent monooxygenase"
                     /protein_id="HEX3992038.1"
                     /translation="VTTASTTYNEPFNLARKFATLDQISNGRAGWNVVASWSEHEAQN
                     FGLETTLDYDTRYARSAEFVEVVKGLWDGWEAGALLFDKATGRYFDETKMHVLNHEGR
                     FFKVRGPLNVAGLPQGHPVIVQAGASEQGRELGAATADVIYVIHDSLQRAQGYYADIK
                     GRMAKYGRDPDDLKIMPAICPVVARTRAEAQAKYDQLQALIDPLVGLGQLYPLFGDLS
                     HCPLDGPVPEDALGKQELRSLSTQFVERMRKEKPTIRELYLRSGISGSARIGTASDVA
                     DLMQEWFEASGCDGFNVTPATLPGGGDDFVEMVVPELQRRGLFRTEYEAATLRENLGI
                     RPAINRYSQSHATAG"
BASE COUNT          930 a         1514 c         1381 g          986 t
ORIGIN      
        1 cgtctgtttg tttgtccatt cgtcgcgacg acgagggcat gcgcagcgag gcgttcgtgg
       61 cttcccaggt tgtggccaaa ggcggcaccg gcggccttac gcccaggttg gcgacgacgt
      121 gtcgcctcac ctggcaggat atccgccggt tatcacgtcg cggtcccgac tttctgcgcc
      181 gcgatccagg acgccacgtg atcgtaatgg ttcgccaggt aatactcggc gatatcgtct
      241 gccgtggtgt tccagactcc atcatgacca aggatatacg ccaatgcctg gtccagatat
      301 ttcgcggcat tcggccggcc aatattgtgc gggtgcaacg aaagacacat cacccgcccg
      361 ctttccgctc cctcgcggta cagcgtgtcg aactgatcct tgatcatctg cagaaaataa
      421 tccgcctcgc ggttccaggc cagcatgccg gcgtcgttgg tctggccggt ataaggcaca
      481 tagatgaact tctgaccgcc acgcacattg atcggccagg gctggtcatc gatgatccat
      541 gacgtgtgat agaggcagcc ggcctccgcc atcaaatcat ccgttctgac cgtatagccg
      601 gccccgccgc caagccgtcc tttcaaccgt ttaccggtca tccgctgcaa atgcgtgatg
      661 aaatcctgcc aatattcgcg ttcctgctgc tcggtgtaat cgtaaatcgg ccggctgttg
      721 tacaggccat gcgccatgta atcccagtcg ctggcaatca tggcatcctt gatctccggg
      781 aagtgatcga gaatttccag attgagacag caacatgccc gaaccttgtg tttgttcaac
      841 acgtcgagca tgcgccagaa tccgacccgg ttgccgtagt ccatgcgcga ataggttgga
      901 atgtccggtt gcgttggccg gctttgcggc aggtactcga aaaactccat gttcggtgca
      961 acccagaacg cgacgcgcgc gttgccaggc catttgatga cgggccgttg cgtgatcggt
     1021 gcgtaatcga accggccggg tgcgatggac atctcgtgtt ctccgttggc tcgggtgaca
     1081 attaccctcg atgtgccttg aaccagtcga cgatttcgcc accggtggct cgccagacac
     1141 cctggtgcgc gcagatatgg caaagcacct ggtcgaggtg gcgaatgcgc cacggctggc
     1201 ccatgatcca cggatgcaga tgcagcacca tcagccgccc ggtcgtcgca ccgtcggaat
     1261 acaaaccgtc gaaccagtcg cgccaaagca aattaacctc gttgatggtg cgccggccgt
     1321 gcaaatggat aaaattgtcg tcaaggtatg cgttgacgcc gagtgaataa agttcgccgg
     1381 attggggtgt cattgcgtag ggctgttcgt cattgcccca gtcgcacacg tagcggatgc
     1441 cctccgccgc gagcaggttc ggcgtgttct gcgtctcctg gaaatcgggc ccggaccagc
     1501 cggtcgggcg cttcccggtg gctcgctcaa ccgccgcgat cgaggcgcgg atatacgccc
     1561 gctcctcatc aacagacatg ccgatatgga tgatttgccg gcgcgacaga ccatgcgcga
     1621 tgaactcggc gttgcgttgt agcccttcgt tgaccaggaa cggataatga tccgcaatga
     1681 ccttatcgag cgccagcgtc ggcctgatcc catacttgtc cagcaccgcc agaatgcgga
     1741 atattccgac gcggttgccg tattcgtggt tgccgtaacc gccgatgtcg gggaacatcg
     1801 gctgattgcc ggtccacagg ccctcggggc cgcccattgg cgtgaccgga agcggtgtac
     1861 cggccggcac ctcccagtcc cagtgctcca gattgacaat gaccgcgagc gcaactcgcg
     1921 cattgtccgg ccactggagt actgggcggg taacaatcgg ggaccaggga taaatatcct
     1981 gatccattcc gtaactccgc gtcgccggca tggctcctgc tcccctgctg ctgggtcagg
     2041 ctatgcttgt ttgccggcga cagtccatgc ggagaccggg cttcattcag atcgcgatgg
     2101 cagcacccac tccgcaaaac caattataat cgcaatccgc tcttgcgcag cggtcgcata
     2161 aagcaaacac cggcttcggt gaaaccggtg gcccggcaaa attgttgcag atccggttgt
     2221 tccggcgcaa ccaaaagctc cagcgcacca cagcccgcga cccgggccgc ctgagaggcc
     2281 gccttgacca gcagccggcc gatgccccgc cgacgcgcct cgggcgcaac cagcaacgtg
     2341 gtgatttgtg ccgccggatg atcgccatca attgtcggat accagtgcat tacgacgagg
     2401 ccgctcggag gtccccattc tgccgcaagc aacgccgtgc ctggtgcctg ccggatcgca
     2461 tccagccggt cggccaggct gcgcggtaac gttgcatgcc cggaagcact cagcaattcg
     2521 cacagacctg gcgcgtcggc gctggtggcg gcacgtatct ccagtccgcg gcgggtcttc
     2581 aaccggtgtc tcctgcatca ggcaccatca ggccacctgg ggtcgccgga cccaccctgc
     2641 cacgacaaca cggcatcgtc atccaacgcg tgatcggcca caggaccagc gcctatttgg
     2701 cgcatccggg tgcgcctcgc aggttctccg accgccgcct ggcatggctg agcgaactgc
     2761 cgttgttggg tctgatccta ggtgtgtggt cccggcatga ctgtgttgag ccggccggtg
     2821 atactgcatg gaccgtttgc gaccgcctcc caggctgaca atcgtcgctc cgatgcgagg
     2881 agctgggcgg cctacgcgcc ggccggagag cagtagcacg gatttcttcc aatttctgat
     2941 acgaaattta tttttccaaa tttactcttg caagccctta acgggaatgg taagaaggtt
     3001 ttgtttttag ccgattgagt gattattgat ccaccgtttg aggatgccgc cgtttcggcg
     3061 gcatcccacg gttctctaga tcgaactgcc aggccagaag gaaacaagcg gtgaattaca
     3121 cggtacagca cctctatact ttgtcggtcg accgtatctg tgacctcgat tggtcaggca
     3181 tcaccgaaga agaattcatc gacgtcgcct gggcgtacta ctatttttcg atccagtttc
     3241 gtgaaaatct gacaatcgcc tgcgagatgt tcccgcacga ctccaagctg cagcaactcg
     3301 agcgggaaga gtgtgcgacc gacaacctct cgccctggcc aggtgttgcg gccaggggtg
     3361 agaagatgaa ccatgacgag ttcatgcgcc gtcttctgca actcacgccg atcagcgatc
     3421 agaagcgctg ggacttcgag gaggccggcg agcgttacct cgcaaaagtt cgtgcaaccg
     3481 acgacctgac ccgtgcggtg agcattgcca gttacgagga cggcggacta gagcgggtgt
     3541 ttcgcgcctt cctgcaggca cccgagtgga acaacccggc cctcaacgca ttccggcatt
     3601 tcctgtccga gcatatccgg ttcgacaacg accccgatca gggtcatggc gcgctggccc
     3661 gccacctcac tccggatgac cgcattcttc ccctgtggct ggggtttgag cgcctgctcg
     3721 tcacgttcgt gccaaccctg ctgccgtaac ggtctggacc gctagccagc cgtcgcgtgc
     3781 gactggctgt agcggttgat cgccggccga atccccaggt tttcccgcag cgtcgcggct
     3841 tcatattcgg tgcggaacaa gccacgacgt tgcagttccg gtacaaccat ctcgacgaaa
     3901 tcgtcaccgc cccccggcag agtcgccggc gtaacgttga agccatcgca tcccgaagct
     3961 tcaaaccatt cctgcatgag gtcggcaaca tccgaggccg ttccaatcct cgccgagccg
     4021 ctgatgccgg accgtaagta caactcccgg atcgtcggtt tctccttgcg catgcgttcg
     4081 acaaactgcg tgctgaggct gcgtaattcc tgcttgccga gagcgtcctc cggcaccgga
     4141 ccgtcaagcg gacagtgcga caggtcgccg aacaacggat acaactgccc cagaccaacc
     4201 aatggatcga tcagcgcctg caactgatcg tacttcgcct gcgcctccgc gcgggtgcga
     4261 gcaacgaccg gacaaatcgc cggcatgatt ttcaggtcat ccgggtcgcg tccgtacttc
     4321 gccatgcgcc ctttaatatc ggcgtaatag ccttgcgcgc gctgcaacga atcgtgaatg
     4381 acataaatga cgtcggcggt cgcggcgcca agttccctcc cctgctcgga ggcacccgct
     4441 tgcacgatga ccggatgacc ctgcggtagc ccggctacat tcaacgggcc acgcaccttg
     4501 aaaaaccggc cctcgtggtt cagcacgtgc atcttcgttt cgtcgaaata gcggccggtg
     4561 gctttgtcga acagcaaggc gccagcctcc cagccatccc ataggccctt caccacctca
     4621 acgaattcgg ccgagcgtgc gtaacgcgtg tcgtagtcca gcgtcgtttc caggccgaag
     4681 ttctgtgcct catgttccga ccaggaggca acaacgttcc agccggcacg accgttgctg
     4741 atctggtcca atgtggcaaa cttgcgcgcc aggttgaacg gttcgttgta cgtggtggac
     4801 gccgtcgtca c
//
LOCUS       DATAVD010000675         4630 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2668262, whole genome shotgun sequence.
ACCESSION   DATAVD010000675 DATAVD010000000
VERSION     DATAVD010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4630
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2668262"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..839)
                     /locus_tag="VHX39_12785"
     CDS             complement(<1..839)
                     /locus_tag="VHX39_12785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018980626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HEX3992039.1"
                     /translation="MPKRRRVYVGGTRAITGAVRTWSRRVILASALTAPLWQAAVAAP
                     PPISVPVDLSSFAPPGSAGGNFIQSLGRTNYLLGDMGGLRTLLNKYGISLALQETSEG
                     MGNVTGGAQRGAAYEGLTQAVLQMDTYRAFGLYGGLLNISGLNYHGSNFSQTNLLTLQ
                     TASGIEADHATRLWELWYQQKFLDEDRLDIKVGQQSLDQEFMVNQNGLYLMNTMFGWP
                     MLPSADLPGGGPAYPLSGLGVRARWRPVDSIQILAGVFTGSPSPKNGGDAQLQNPYGT
                     RFP"
     gene            1490..1684
                     /locus_tag="VHX39_12790"
     CDS             1490..1684
                     /locus_tag="VHX39_12790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992040.1"
                     /translation="MRASAEQIVTSLALVLAAAAAIVTSPGVPNRMYQITQWVAAGTA
                     VEAAANAGAIGEDPDLLQAP"
     gene            1815..2879
                     /locus_tag="VHX39_12795"
     CDS             1815..2879
                     /locus_tag="VHX39_12795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012552962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HEX3992041.1"
                     /translation="MSNFAIFLHIRNVCARADGFVCALAGVVVTATVLPCRGDFARVV
                     HVAGLLAIAALFFLQGARLSRNAIVLGMTHLRLHLAIATTTFVLFPLLGLGLLAVAPN
                     LLPQPLLLGVLFVCALPSTVQSSIALTSIAGGNVPGAVCSATVSNIAGIALAPVLFGA
                     MSHLRGGGIDFAGVWQVGLQLLVPFAAGHLLRPWIGLWAERNRTVLSITDRSSILLVV
                     YSAFSAAVVRGIWRQVPPARLLELALLMIVLLGFVLLVTRLVSRSLGLGPSDEAALVF
                     CGSQKSLVSGVPIANALVSGAAVGPMLLPIMLYHPLQLIVCAWLARRYATPGAGEKPP
                     VVTRSLVAVALAPRAGSVGN"
     gene            complement(3152..3724)
                     /locus_tag="VHX39_12800"
     CDS             complement(3152..3724)
                     /locus_tag="VHX39_12800"
                     /inference="COORDINATES: protein motif:HMM:TIGR02098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-ribbon domain-containing protein"
                     /protein_id="HEX3992042.1"
                     /translation="MRIRCPSCSATYEVPDAMLDTPRTVRCAKCAHDWIPVAIIEPEP
                     VEEPDEAPEPELAAPAEAAASEGDDDELAFRRQTARTARERLLEPEAVIGDTPLSAIE
                     RLALGDMSPQIRRRDRLLTAAWAASFAALTGLGVAGYTERNVLMQQWPASKRVYATLG
                     LSTGNGKSVPARIGGATDAPAPVVPAKPAQ"
     gene            complement(3950..>4630)
                     /locus_tag="VHX39_12805"
     CDS             complement(3950..>4630)
                     /locus_tag="VHX39_12805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3992043.1"
                     /translation="LMRPAGPASDYSGGCIQRVDPKTGSVTVLYDRCGAHKLLGPNDI
                     VFDHFGGFYFTDLGKARARDRDWGGVYYALADGSKITEVAHPILTPNGIGLSPDGKTL
                     YVAETETARLWAFDVLAPGVLSKEPFPSPHGGRIMVGLGGFQRFDSLAVDAAGNVCVA
                     TLVNGSVSVVAPGGGLIRQIAMPDMFCTNICFGGPDRKTAFLTLSGTGQLVAMDWPDP
                     GLRLEYEA"
BASE COUNT          825 a         1464 c         1440 g          901 t
ORIGIN      
        1 caggggaagc gcgtgccata ggggttttgc agttgcgcat cgccgccgtt tttgggcgat
       61 gggctgccgg tgaatacgcc ggcaaggatc tggattgagt cgaccggccg ccagcgggca
      121 cgaacgccca acccggacaa cggataagcc ggcccgccgc ccggcaggtc cgccgaaggc
      181 agcatcggcc aaccgaacat cgtgttcatc aggtacagcc cgttctgatt gaccatgaac
      241 tcctggtcca ggctttgctg acccactttg atatcgagcc ggtcttcatc gagaaatttc
      301 tgttgatacc agagctccca cagacgggtg gcgtggtcgg cctcgatccc gctcgcggtc
      361 tgcaacgtca gcaaattcgt ctggctgaag ttcgaaccgt gatagttcag accactgatg
      421 ttgagcagcc cgccgtacag gccgaaggcg cggtacgtgt ccatctgcag gacggcctgg
      481 gtcagaccct cgtaagccgc tccgcgctgc gccccaccgg tgacgttgcc catgccctcg
      541 ctggtttcct ggagtgccag cgagatgccg tacttgttca gcagggtgcg cagccccccc
      601 atgtcgccta gcaaatagtt ggtgcgcccc aacgattgga taaaattgcc gcctgcgctg
      661 ccgggaggtg cgaagctcga gagatcgacc gggaccgaaa tcggcggcgg cgcggcgact
      721 gcggcctgcc atagaggtgc ggtcagggca cttgccagta tgacccgtcg cgaccaggtg
      781 cggaccgccc cggtgatggc gcgtgttccg cccacgtaaa ctcgtcgtcg cttcggcatg
      841 acttatccgc ccccgcgcgg tcactccggt ccgggatggg ccgggggtgc cgccgttggg
      901 ggagttgata atgagagtca ttctcatttg caagtggccg gattgcgagg aaggccgccc
      961 tgaaccggaa gcgtgctccc ctgtggctcg gccaggcgac ataggccgcc acttctgccg
     1021 tgaaaccggc aaccgtttga tcctggggac gggcagagtt cgccggagcg cggtgacagg
     1081 cgaagcgacg ccaccattcc atccggtcat tttattacgg tacgtaacca actaaaccga
     1141 ttttcgtcgt ttcacgccat gggtgtgacg cagttaacag acaatccgtc cgctggctga
     1201 tatccgcaac gccaacaggg tgctcgttcc acatcagttc aattcttgcc aacggagata
     1261 cgatatgatg cacttccgta acactccaga tcggcgccgg actcgagtgt cgagtcccag
     1321 gtggcagccg tgggcagagc aaaaccgcga ggcggcggag tgtcacgatc ccgcacccgc
     1381 cttcgtatcg caaattgcca tgtcgttttg gtgccaacca acaagtcgca ggaccgctga
     1441 tcggcaaccg gcaaattacg ccatttcgac caccaggcgg agaatcacca tgcgcgcctc
     1501 agccgagcaa atcgttacgt cccttgcact ggttctggca gcggcggcgg caatcgtgac
     1561 aagcccagga gtgcccaacc gaatgtatca gattacgcaa tgggtggcgg cgggcaccgc
     1621 tgtcgaggcc gccgccaacg caggcgctat cggcgaggat ccagatttgc tccaggctcc
     1681 ataaattcga ttcacttaat tacctgttcc tgggcaccag aatatcttgc gcctgacagg
     1741 accgggtctc tctcacagcc aaacggcacc aacatcatcc ggcaccaggc agcatcgacg
     1801 ggagtactcg gcagatgagt aatttcgcga tatttttgca catcaggaac gtttgtgcgc
     1861 gggccgacgg tttcgtctgt gccctggcgg gcgtggttgt tactgcaacc gtcctgccct
     1921 gccgcggcga cttcgcacgg gtggttcatg tggcaggcct cctggccatt gccgcgctgt
     1981 tcttcctgca aggtgcccgt ctgtcccgca atgcgattgt gcttggcatg acgcatttgc
     2041 ggctgcatct ggccatcgcc acgacgacgt tcgtgctgtt tccgttgctc ggccttggac
     2101 ttctcgccgt ggcaccaaat ttgttgccgc agccgctgtt gcttggggta ctattcgttt
     2161 gcgcgctgcc atcgacggtg cagtcttcga tcgccctgac atcgatcgcc ggaggcaatg
     2221 tacccggcgc ggtttgctcg gcgacggttt ccaacattgc ggggatcgcg ttggcaccgg
     2281 tgctattcgg tgcgatgtcg catttgcgcg gcggcggcat tgacttcgca ggtgtctggc
     2341 aagtgggtct gcaattgctg gtgccattcg ccgccggcca cctgttacgg ccctggatcg
     2401 gcctttgggc cgagcggaac cggactgtgc tctcgatcac cgaccgcagc tcgatcctgc
     2461 tggtggttta cagcgcgttc agtgcggccg tggtgcgagg catctggcga caagtgccac
     2521 cggcccgatt gttggaactg gcgttgctga tgatcgtgct gctcggtttc gtcctgctgg
     2581 tcacgcggtt ggtcagccga tcgttgggcc tcggacccag cgacgaggca gccctggtgt
     2641 tctgcggatc gcaaaagtcc ctggtgagtg gcgtcccgat cgccaacgcg ctggtctcag
     2701 gcgcggctgt cggcccaatg ttgttgccga tcatgttgta tcatcccttg cagctgattg
     2761 tttgcgcctg gttggctcgc cgttacgcga cgcctggggc tggagagaag ccgccggttg
     2821 tgacgcgatc cctggtcgcg gtcgccttgg cgccacgggc cggctcggta gggaattagc
     2881 ggtttccgat ccgaaaaaac cgtttcgaaa tcggccggtt cgggtcctcc ggatgcagcc
     2941 ctgtgcttgc tgaaaccaag gcaatttcac cgaggtcacg gagcgcccgg aggacgcgga
     3001 gaagaacggc agcgccaatg agcatctccg agccctccgc gacctccggg atttatggaa
     3061 cggcagcacg cgcagggacg tccgagccgg acatcaaagc gtctcggttg tccactaaca
     3121 cggctcgacg aacacgagcc gcacgggaga actattgcgc tggtttcgcc ggcacgaccg
     3181 gcgccggagc atccgttgcc ccgccgatcc gtgctggcac ggacttccca ttccctgtgc
     3241 tcaggccaag cgtggcgtac acgcgtttgc tggccggcca ctgttgcatc agcacgttgc
     3301 gttcggtgta gccagccacc cccagccccg tcagggctgc gaaactggcg gcccaggctg
     3361 cggtaagcaa acggtcgcgg cggcgtatct ggggtgacat atccccgagg gccagccgtt
     3421 cgatggcgga caaaggcgta tcgccaatca ctgcctcggg ttccagcaag cgttcgcggg
     3481 ccgttcgcgc agtttgccgg cggaacgcaa gctcgtcgtc gtctccctct gacgcagcgg
     3541 cttccgccgg cgctgcaagc tcgggctcgg gtgcctcgtc aggttcctcc acgggctcgg
     3601 gttcgatgat cgccaccggg atccagtcgt gcgcgcactt cgcacaccgg acggtccggg
     3661 gtgtatcgag catggcgtcc ggcacctcgt aagttgccga acaggacggg catcgaattc
     3721 gcatagctaa ggtagtccct gaagtctgaa ccccttcgat caggggtcac gaatgtggca
     3781 ttttcctccg aaatgcaact tacggttaga ctacacccag aggaaggccc gtccgaacgt
     3841 cctgctgcct tgtctcctgg ctgccacagc agcccgtttt accccccggg cgacgcagca
     3901 ccccacactt gcaggccgga ccacgacggg ccagctcggg ttccagtgat caggcctcgt
     3961 attccagacg gaggccggga tccggccagt ccatggcgac cagttggccg gtgccggaca
     4021 acgtcagaaa ggcggtcttc cggtccggcc cgccgaagca aatgttggtg cagaacatgt
     4081 ccggcatggc gatctgccgg atcaacccgc cgccaggcgc caccacgctg accgagccgt
     4141 tcaccagggt tgccacacac acattccctg cagcatcaac cgccaggcta tcgaagcgct
     4201 ggaacccacc caggcccacc atgatccgcc cgccatgcgg cgaagggaac ggttctttgc
     4261 tcaggacacc gggcgccagc acatcgaagg cccacagccg ggcggtctcg gtttcggcca
     4321 catagagggt cttgccgtcc ggcgagaggc cgatgccgtt cggggtcagg atgggatgcg
     4381 ccacctcggt gatcttcgaa ccgtcggcaa gggcgtagta aacaccgccc cagtcgcgat
     4441 cgcgggcgcg cgccttgccg aggtcggtga aataaaaccc gccaaaatga tcgaacacga
     4501 tgtcattggg gccgagcaat ttatgcgcac cgcagcgatc gtacagcacc gtgaccgagc
     4561 cggttttcgg atccacacgc tggatgcatc cgccggaata gtctgacgcc gggcctgccg
     4621 gccgcatcag
//
LOCUS       DATAVD010000676         3155 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3039552, whole genome shotgun sequence.
ACCESSION   DATAVD010000676 DATAVD010000000
VERSION     DATAVD010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3155
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3039552"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..553)
                     /locus_tag="VHX39_12810"
     CDS             complement(<1..553)
                     /locus_tag="VHX39_12810"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3992044.1"
                     /translation="MAHINIEFTLFSAFYSPLISLMSGGFLKAEGLEADWTVSPPGVS
                     AVKALEEGRADVIQSAPSQAFASLAKGEVPTAVHFAQINEMDGFFITGRAPDPDFDWK
                     RLEGAEVILFGGGQPLAMFKYACHKAGIDFAKLKVISPGSAEAMDKAFRDGNGQYIQQ
                     QGPFPQQLEADGVGHIVAQCGPKI"
     gene            complement(938..1921)
                     /locus_tag="VHX39_12815"
     CDS             complement(938..1921)
                     /locus_tag="VHX39_12815"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3992045.1"
                     /translation="MQYTKLGRTGLDVSRLCLGCMSYGGGNSGFHQWSLGEEESRPFI
                     RKALEAGINFFDTANRYSVGKSEEVLGRALNDFARREEVVIATKVFNRMRPGPNGAGL
                     SRKNILFEIDESLRRLGTDYVDLYQIHRFDHATPIEETMEVLHDVVKAGKARYIGASS
                     MHAWEFAKAQSVADRNGWTRFVSMQNLVNLMYREEEREMLPLCADQGIGVIPWSPQAR
                     GRLTRDWDYKSIRTETDEAYGRMFKNATEEADKRVVNRVAEVAKARGVPRAQIALAWL
                     LHKPVITAPIVGATKLEHLDDALGSLEVKLSAEEIVALEEPYAPHPVAGFA"
     gene            complement(2213..3049)
                     /locus_tag="VHX39_12820"
     CDS             complement(2213..3049)
                     /locus_tag="VHX39_12820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX3992046.1"
                     /translation="MTSIAITTSSPRPVGHLLREWRQRRRMSQLDLASEAEISTKHLS
                     FMETGRSTPSRDMVLHLAEQLDVPLRARNALLNAAGYAPVFPERRLDDPAMAAARQAI
                     DLVLAGHEPHPALAVDRHWCMAAANRAVAPLMTGVDPALLRPPVNVLRVGLHPGGLAP
                     RTVNLAEWRAHLLAGLRQQIEVSGDPVLVDLLAELRSYDAPAGPNPRAASVDRAAVAV
                     PFRLATDHGVLSFLSTITVFGTPVDVTLSELALECFYPADQATAEAMRQLVSAAEPAA
                     AK"
BASE COUNT          638 a         1045 c          876 g          596 t
ORIGIN      
        1 cgatcttcgg gccgcattgc gcaacgatgt gcccaacgcc atcggcttcc agctgctgcg
       61 ggaacggccc ctgctgctga atgtactgcc cgttgccgtc ccgaaacgcc ttatccattg
      121 cctcggcact accagggctg atgactttga gtttggcgaa atcaatgccc gccttgtggc
      181 aggcatattt gaacatcgcc aggggctggc cgccgccgaa aaggatgacc tctgcccctt
      241 cgagccgctt ccaatcaaag tccggatcgg gagcccggcc ggtgatgaag aacccgtcca
      301 tctcgttgat ctgtgcaaaa tgcacggccg ttggcacttc tccctttgcg aggcttgcaa
      361 aagcctggct tggagcggac tggatgacgt cggctcgccc ttcctccagt gcctttaccg
      421 cggaaacgcc aggcggcgag actgtccaat ctgcctccag cccctcagcc ttcaggaagc
      481 caccggacat caacgaaatc agcggcgagt agaaggcaga gaacaaagtg aattctatat
      541 tgatgtgcgc cattttggga cctcccaagc attataccaa ccatccgata gagcgacgta
      601 ttcccgtctc accgtcatgg caaaacggtc aacctttccg ccacatggta tacccggatg
      661 cggtggaaat ctggtgtatc gttaaacaaa cggaagtatt ttcaccacag agccgcagag
      721 tccgcagaga attgttttca aacgcaacct tgaatgtccg aacctctgtg cgctccgcgg
      781 ctctgtggtg aatcaccctt tctcacccgg gattccgtcg tgcgttggat atactacaac
      841 gcgactctga tgcgcacagc agcgctgccg ccggcttcct tcgccctgat ccacgaccgg
      901 gcgaaagcga ctccaagttg cgccaggcga gtttacctca ggcaaacccg gccacagggt
      961 gcggggcata gggttcctcc agcgcaacga tctcctcggc cgacaatttc acctcaagcg
     1021 aaccaagcgc atcgtcgaga tgctccaact ttgttgcgcc gacgatcgga gccgtgatga
     1081 ccggcttgtg cagcaaccag gccagcgcga tttgcgcccg cggcacgcct cgcgccttcg
     1141 ccacctcggc gacgcgattg acgacccgtt tatcggcttc ttcggtcgcg ttcttgaaca
     1201 tgcggccgta agcttcgtca gtctcagtac ggatgctttt gtaatcccag tcgcgggtca
     1261 gcctgccgcg cgcctggggg ctccagggga tcacgccgat gccctgatcg gcacacagcg
     1321 gcagcatctc acgctcctcc tcacgataca tcagattgac caggttctgc atgctgacga
     1381 agcgcgtcca accgttgcga tcggcgaccg actgggcttt ggcaaactcc cacgcgtgca
     1441 tcgacgaggc gccgatatag cgggccttgc cagccttcac gacatcgtgc agcacttcca
     1501 tcgtctcttc gatcggcgtt gcatgatcga agcgatggat ctggtaaagg tcgacataat
     1561 cggtgcccag ccggcgcagg ctctcatcga tttcgaacag gatgttcttg cgcgacaacc
     1621 cggcgccatt cggccctggg cgcatgcggt taaagacctt ggtggcgata accacttcct
     1681 cgcgccgcgc gaaatcgttg agtgcgcgcc cgagaacctc ctcgctcttg ccaaccgaat
     1741 accgattggc ggtatcgaag aaattgatac cggcttcaag cgccttcctg ataaacggcc
     1801 ggctctcttc ctcgccaagc gaccattggt ggaagccgct attgccgccg ccatagctca
     1861 tgcaaccaag gcagaggcga gagacatcca gcccggtgcg gcccagtttg gtgtattgca
     1921 ttgctcgctc cttttatggg gccacgacgg tatttcgagg cagccattcg gtaaaatggt
     1981 agggggttgc tgcgtcgagg tcttcgatcg cgtccgcagc ctcccggcag cgatatatcc
     2041 atacaaacat aacgaccatt acagcacggc ggcctcgccc tcgcaaccaa ggctgttcgc
     2101 gaggaaaatc cgcgctgaca tcacctgaaa gtgcggtcat caggtcggca cccatcctga
     2161 cccacggatg gcacggcaca gccagaccac ctcgccccac aaccacgagg cgctactttg
     2221 ccgctgccgg ttccgccgcg ctgacaagct ggcgcatcgc ctcggccgtt gcctgatccg
     2281 ccggatagaa acactccagc gccagttcgg acagtgtgac gtcgaccggt gttccaaaga
     2341 cagtaatggt gctgaggaac gacagaaccc catggtcggt ggccaatcgg aacggcaccg
     2401 ccacagcagc acggtccacg cttgccgcac gcgggttcgg cccggccgga gcatcgtagc
     2461 tgcgcagttc ggcgagcaga tccaccagta caggatcacc ggaaacctcg atctgctgcc
     2521 tcaggcccgc cagcaagtgc gcccgccact cggcaagatt gaccgtccgc ggcgccagcc
     2581 cgcctggatg cagccccacc cgcagcacgt ttaccggcgg acgcagcaaa gccggatcga
     2641 cgccagtcat cagcggcgcc acagcgcggt tggccgccgc catgcaccaa tgccgatcca
     2701 cggccagtgc aggatgcggc tcatgaccgg ccagcaccag gtcgatcgcc tgccgcgccg
     2761 ccgccatcgc cggatcatcc agccgccgct ccggaaacac cggcgcatag cccgcggcat
     2821 tcagcagcgc gttccgtgcc cgcagcggca catccagttg ctccgccaga tgtagcacca
     2881 tatcccgact gggcgttgac cggccggtct ccatgaaact cagatgcttg gtagatatct
     2941 ccgcctcgga ggccagatcg agctggctca tgcgccgccg ctggcgccac tcgcgcagca
     3001 aatgaccaac cgggcgaggc gaagacgtcg tgattgcgat cgaggtcatg ccagacgtta
     3061 ccccggtcaa aaaatcatcg ccattacctc gcagttaatt ggcccaggtc atcgcttgtg
     3121 agcctctgtc gcggtgcatc acgagatgca ttgca
//
LOCUS       DATAVD010000677         6450 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_63537, whole genome shotgun sequence.
ACCESSION   DATAVD010000677 DATAVD010000000
VERSION     DATAVD010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6450
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63537"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VHX39_12825"
     CDS             complement(<1..262)
                     /locus_tag="VHX39_12825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992047.1"
                     /translation="MPEDDALRSQEDSVKLDWPAVRAYLARHGMRLDDDPPPRQFAGG
                     LANLNYLISLDGKPAVLRRPPMGELPAGAYDMAREHRILSRLP"
     gene            327..1265
                     /locus_tag="VHX39_12830"
     CDS             327..1265
                     /locus_tag="VHX39_12830"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEX3992048.1"
                     /translation="MTQPRAVQRVAVLGAGTIGASWTAWFLARGMSVDVWDPRPEAEA
                     YVRRTIADAWPAMARLGMVTGASPDAWRFVSAPEAAVQHAQFVQENAPERMPIKRELY
                     ARIDTALPPDAILASSTSGLIMSDIQAGFLSAGRCAVGHPFNPPHLIPLVEVVGGRET
                     APETIAWCLEFYRFIGKKPIHIRKEAPGHLANRLQAALWREAVSAVVTGLASVEDVDT
                     AISAGPGLRWAAMGPHMTFHLGGGEGGITHMLDQFKPAFEAWWATMSTPELSAENMQQ
                     IIDGVAAEARGRSIAQLAAERDAVLLPLLELTGGRG"
     gene            1262..2947
                     /locus_tag="VHX39_12835"
     CDS             1262..2947
                     /locus_tag="VHX39_12835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3992049.1"
                     /translation="MTELSYAHGISTTPLLGETIGRHFDRTVERWGDRPALVSRQQGV
                     NWSWRELGARVEKFAAGLVAMGLQPGERVGIWSPNNAEWIVTQYATAKAGLILVNINP
                     AYRLSEVEYALNKVGCRALVTATKFKTSDYIGMVGTLAPELARARPGHLDAATLPTLH
                     AVIQIGGAAAGTIPFDSVYELGGAAERTALAELAGRLQFDDAINIQFTSGTTGLPKGA
                     TLTHHNILNNGYFLAQAMRYTDQDKVCIPVPMYHCFGMVIGSLACLTSGAAIVFPGEG
                     FDPLATLQTVAEERCTSLYGVPTMFIAELDHPEFRKFDLGSLRTGMMAGAPCPIEVMR
                     RCIADMHLSDITIGYGMTETSPVSTQTLIGDTLEHQTATVGRVHPHVEVKIIDTEGRV
                     VPVGTAGEFCTRGYSVMLGYWDDAERTAQAIDQAGWMHTGDLATMDADGYCNIVGRIK
                     DMVIRGGENIYPREIEEFLYRHPSIQDVQVFGVPDPRYGEELCAWIKIRDGATLTDED
                     VKAFCKDQIAHYKVPRHIRFVNDFPMTVTGKMQKFIMRETMIAEIGIKEIATA"
     gene            2965..3750
                     /locus_tag="VHX39_12840"
     CDS             2965..3750
                     /locus_tag="VHX39_12840"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX3992050.1"
                     /translation="MRWARFDNGGTPTYGVVEGDTIIPVRGSPFDAWERTSARRKLSD
                     VTLMVPVIPPTFYAAGLNYAVHVREAAEKLGLPVSLPTQPDIGYRANNALIAHGENIV
                     IPADATELVQYEGELVAVIGRKCKHLTRENALSAVLGWTIGNDFSERSWQKQDRTLWR
                     AKNTDTFKPMGPWIETDVKLEDLVTKIRLNGKELINFKTNDMVFGVVDYLVAMTTCLT
                     LYPGDVVWMGTEGKTENVKHGDTIEVEITGIGTLSNGVVREGQ"
     gene            complement(3754..5103)
                     /locus_tag="VHX39_12845"
     CDS             complement(3754..5103)
                     /locus_tag="VHX39_12845"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434969.1"
                     /note="This protein belongs to a clade of FMN-dependent
                     monooxygenases, within a broader family of
                     flavin-dependent oxidoreductases, the luciferase-like
                     monooxygenase (LMM) family, some of whose members use
                     coenzyme F420 rather than FMN; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NtaA/DmoA family FMN-dependent monooxygenase"
                     /protein_id="HEX3992051.1"
                     /translation="MRQMVLVGFLQAQNCTTLASAWRHPDARSDFTSAAYYRKIGEVL
                     EAGKFQMGFFDDRLAMPDIYGGNPAEVVANGVRVVKIDPVATMMAMGLGTRFLGVGST
                     ASTTYYEPFDVARRFQTVDHLIGGRAAWNVVTSVNDGEAHNMGRDVHMDHDLRYDRAD
                     EFMEIVHSCWDGWEDDALVVDKATGLFAHPEKVHRLEYEGKFLKSHGTFTVPRSPQGH
                     PVVIQAGSSPRGKVFATRWAETMFVGYPDFPTAQRDYAAMKASIAGLNRDPDKVTINT
                     IAYPVVAETRAEAEDKWALIDRLYREVDGLSLLSEALNYDFKKKAMDEAFSDEELEGM
                     SGMQAMRNRVMERSGRNPTVRDFLEITRRGRPREAIIGSGKDIADRLEKWFSEGACDG
                     YVIAGTHTPGTFEDFVKFVVPELQRRGLSPTEYKGATLRENLGLPRPEIGGWKLTAA"
     gene            complement(5152..5904)
                     /locus_tag="VHX39_12850"
     CDS             complement(5152..5904)
                     /locus_tag="VHX39_12850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3992052.1"
                     /translation="MDLQLRGKTALVTGASMGIGRAIAKALAAEGVRVVGAARRLEEM
                     ERMADEVEAAQHPRPVLIRQDVMEEGAAMKLRDAAYEAVGQIDILVNNAGGSRRLPVD
                     AAEERWVEAMTLNFTRPRQLAHALLPKMIENRWGRIINITGKSEPDHLNAAFSAKAGI
                     HAWAKGLSIEVGQYGITVNSIPPGRIMSEQIRRNYPEDFRKTFAETEIPLKYWGEPED
                     LAVMAVWLASPLARYITGTVIPVDGGLRRYSF"
     gene            complement(6035..>6450)
                     /locus_tag="VHX39_12855"
     CDS             complement(6035..>6450)
                     /locus_tag="VHX39_12855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HEX3992053.1"
                     /translation="LPQVAAARERPGLKDRIRIIAAGTLVTPDKVAWALCMGADFVSS
                     ARGFMFSLGCIQAMKCGSGKCPTGVTSSEERLIAGLDPTDKAARVARYAERMREDVDT
                     IAHSCGLNDPGGFLPRHVTEIERGVGGFRAPQGGD"
BASE COUNT         1263 a         2028 c         1982 g         1177 t
ORIGIN      
        1 ccggcaaccg ggacagaatg cggtgctcac gtgccatgtc gtaggcgcca gccggcaact
       61 cccccatcgg cgggcggcgg agcacggccg gtttgccgtc cagcgaaatc agataattga
      121 ggttggccag tccgccggcg aactgccgag gcggcgggtc atcatccagc cgcatcccat
      181 gccgcgcgag gtaagcccgc accgccggcc agtccagttt gacgctgtcc tcctgcgagc
      241 gaagcgcgtc gtcctctggc accggatcct cctattggct tgcgagcagc ccagtgaaac
      301 gccaatactg atacaggagg aacgcgatga cgcaaccgag ggcagtacag cgggttgccg
      361 tgcttggcgc cggcaccatt ggcgccagct ggacggcgtg gtttctcgca cgcggcatgt
      421 cggtggacgt gtgggacccg aggccggaag ccgaggccta cgtccgccgc accatcgccg
      481 acgcctggcc cgcgatggcg cgcttgggca tggtcaccgg cgcctcgccc gatgcgtggc
      541 ggttcgtcag tgcgccggaa gccgcagtgc agcacgcgca gttcgtgcag gagaacgctc
      601 cggaacgaat gccgatcaaa cgcgagcttt acgcccgcat cgacaccgct ttaccgccgg
      661 acgcgatcct ggcgtcaagc acgtcgggcc tgatcatgtc ggacatccag gcgggatttc
      721 tgagcgccgg gcgctgcgca gtcggccacc cgttcaatcc accgcatttg atcccgctgg
      781 tcgaggtggt cggcggccgt gaaaccgcac ccgaaaccat cgcatggtgt ctggagtttt
      841 accggttcat cggcaaaaag ccgatccata tccgtaagga ggcgccaggc cacctcgcca
      901 accggttgca agccgcgctg tggcgggagg cggtcagcgc cgtggtcacc ggccttgcct
      961 cggtcgagga cgtcgatacc gcaatatccg ccggtcccgg ccttcgctgg gctgcgatgg
     1021 gtccgcacat gacgtttcat ttgggcggcg gtgagggcgg catcacccat atgctcgacc
     1081 agttcaagcc ggcgtttgag gcctggtggg cgacaatgtc gacaccggaa ctgtcggcag
     1141 agaacatgca gcagattatc gacggcgtgg cagcggaagc acgaggccgc tcgatcgcgc
     1201 aactggcagc cgaacgcgac gccgtgttat tgccgttgtt ggaactgacc ggaggacggg
     1261 gatgacagaa ctcagctacg cgcacggtat ttcgacgacg ccgttgcttg gcgagacgat
     1321 cggccggcat ttcgatcgca ccgtggaacg gtggggtgat cgtcctgcgc tggtctcgcg
     1381 tcagcaaggt gtcaactgga gctggcgcga gcttggcgca cgggtagaaa agttcgccgc
     1441 cggtctggtc gcaatgggcc tgcaaccggg tgaacgagtg ggcatctggt cgcccaacaa
     1501 tgccgaatgg atcgttacgc aatacgcaac ggcaaaagcc ggcctgatcc tggtcaacat
     1561 caacccggcg taccggctgt ccgaagttga atacgcactg aacaaggtcg gctgccgggc
     1621 gctggtcacc gcgacgaagt tcaaaaccag cgactatatc gggatggttg gcaccttggc
     1681 cccggaactg gcaagggcgc gacccggtca cctggatgcc gcgacattgc cgacattgca
     1741 cgccgttatc cagattggtg gcgcagccgc cggaaccatc ccgttcgatt ccgtttacga
     1801 actcggtggc gccgccgaac gaaccgctct ggcggagttg gccggccggt tgcaattcga
     1861 cgatgccatc aatattcagt tcacctccgg cacgaccggc ttgcccaagg gtgccacgct
     1921 gacgcatcac aacattctga acaacggcta tttcctggcg caggccatgc gttataccga
     1981 ccaggacaaa gtctgcatcc cggtgccgat gtatcactgt ttcgggatgg tgatcggcag
     2041 cctcgcctgc ctgaccagcg gtgcggcgat cgtgttcccg ggcgagggtt ttgatccgct
     2101 ggcgaccctg caaacggtgg ccgaagaacg ctgcacgtcg ttgtacggcg tgccgaccat
     2161 gttcattgcc gaactggacc atccggaatt caggaaattt gacctcggca gcctgcgcac
     2221 cggcatgatg gcgggcgcgc cctgccccat cgaggtcatg cgccgttgca tcgccgacat
     2281 gcacctcagc gacataacca tcggctacgg catgaccgaa accagtccgg tcagcacgca
     2341 gactctgatc ggtgataccc tggagcatca gactgcgacc gtgggcagag tccatccgca
     2401 cgtcgaggtc aagattatcg acacggaagg ccgggtggtt ccggtcggca ctgcgggaga
     2461 attctgcacc cggggttatt cggtgatgct cggatactgg gacgatgcgg aacgcaccgc
     2521 gcaagccatc gaccaggcag gctggatgca caccggcgat ctggcgacga tggatgccga
     2581 cggctactgc aatatcgtcg gccgcatcaa ggacatggtg atccgcggcg gcgaaaacat
     2641 ctatccacgc gaaatcgaag aatttctcta ccgccatccc tcgatccagg acgtgcaggt
     2701 attcggcgtc cccgacccgc gctatggtga ggaactgtgt gcctggatca aaattcgcga
     2761 cggcgcgacg ctgaccgacg aggacgtcaa ggcgttctgc aaggatcaga tcgcgcatta
     2821 caaagtgcct cggcacatca ggttcgtgaa cgacttcccg atgacggtca ctggcaaaat
     2881 gcaaaagttc atcatgcggg agacgatgat tgccgaaatc ggcatcaagg aaatcgccac
     2941 cgcctgacaa tcaggagaac ctccatgcga tgggctcgtt tcgataacgg tgggacgcca
     3001 acctatggcg tcgtcgaagg cgacacgatc attccggtgc gcggatcgcc gttcgacgcc
     3061 tgggagcgca cctcggcacg ccgcaaactg tccgatgtga cgttgatggt gccggtgatc
     3121 ccgccgacat tctacgccgc cggcctcaac tacgccgtcc acgtccgcga agccgccgag
     3181 aaactgggtt tgccggtcag cctgccgacg cagccggata tcggctatcg tgccaacaac
     3241 gcgctgatcg cgcatggcga aaacatcgtc attccggccg atgccaccga actggtccaa
     3301 tacgaaggcg agctggtcgc ggtgatcggc cgcaaatgta agcacctgac gcgggaaaac
     3361 gcgttgtccg cggtgctcgg ctggaccatc ggcaatgatt tcagcgaacg cagctggcaa
     3421 aagcaggacc gcactttgtg gcgcgccaag aataccgata ccttcaagcc gatggggccc
     3481 tggatcgaga ccgatgtgaa actggaggat ctggtcacca aaatccgcct gaatggcaag
     3541 gaactgatca atttcaaaac caacgacatg gtgttcggcg tcgtcgatta tctggtcgcc
     3601 atgacgacct gcctgacatt gtatcctggc gacgtggtct ggatgggcac cgagggcaaa
     3661 accgaaaatg tgaaacacgg tgacacgatc gaggtcgaaa tcaccggcat cggtacgcta
     3721 tcgaatggcg tggtccgcga gggacagtaa ccgctacgcg gccgtcagct tccaaccgcc
     3781 gatttccgga cgcgggaggc caaggttctc gcgcaacgtc gcgcccttat actccgtcgg
     3841 cgacaggccg cgccgttgca attccggcac gacgaatttg acgaaatcct cgaacgtgcc
     3901 gggcgtgtgc gtgccggcga tgacgtaacc gtcgcaggcg ccttccgaaa accatttctc
     3961 cagccggtcg gcgatgtcct tgccgctgcc gatgatcgcc tcgcgcgggc ggcctcggcg
     4021 ggtaatttcc aggaagtcgc gcacggtcgg attgcggccg gatcgttcca tcacacggtt
     4081 gcgcattgcc tgcatgccgg acatgccttc gagttcttcg tcgctgaacg cctcgtccat
     4141 ggcctttttc ttgaagtcgt agttcagcgc ttccgacagc agcgacaggc cgtcgacctc
     4201 gcggtaaagc cgatcgatca aggcccactt gtcctcggcc tcggcacggg tttccgccac
     4261 caccggataa gcgatggtgt tgatcgtcac cttatccgga tcacggttca gaccggcgat
     4321 tgacgctttc attgccgcgt agtcgcgttg cgcggtcgga aaatcgggat aaccgacaaa
     4381 catcgtttcc gcccaccgcg tggcgaacac tttgccgcgc ggactggagc cggcctgaat
     4441 gacaaccgga tggccttgcg gcgaccgagg caccgtgaac gtgccatgcg atttcaggaa
     4501 ttttccctcg tattccaggc gatggacttt ctccgggtgg gcgaacaggc cagttgcctt
     4561 gtccaccacc agagcgtcat cttcccaacc atcccagcaa ctgtgcacga tctccatgaa
     4621 ctcgtcggcc cggtcgtaac gcagatcgtg atccatatgc acatcgcgac ccatgttgtg
     4681 cgcctcgcca tcattgaccg aggtgacaac gttccaggcc gcgcggccac cgatcaaatg
     4741 atcgaccgtc tgaaatcggc gggcgacatc gaacggctcg tagtaagtcg tagatgcggt
     4801 cgaaccgacg ccaagaaacc gcgtgcccaa tcccatcgcc atcatcgtcg cgaccggatc
     4861 gattttcacc acgcgcacgc cattggcaac gacctcggcg gggttgccgc cataaatatc
     4921 cggcatcgcc agacggtcgt cgaaaaaccc catctggaat ttgccggctt ccaggacctc
     4981 gccgattttt cggtaataag ccgcggacgt gaaatcggaa cgagcgtcag gatgccgcca
     5041 cgcgctcgcc agcgttgtgc agttctgcgc ctgcagaaag ccgaccagga ccatttgccg
     5101 catcaccaaa ctccgttcgt cattccggcg ggagtctagg gcggcgaggt gtcagaagga
     5161 atagcgccgc aaaccgccgt cgaccggaat gaccgttccg gtgatgtaac gcgcaagtgg
     5221 cgaggcaagc cagaccgcca tgacagccag atcctccggc tcaccccagt atttcaacgg
     5281 gatttccgtc tcggcaaaag tcttgcgaaa atcctcggga taattgcggc ggatttgctc
     5341 gctcatgata cggccgggag gaatcgagtt caccgtgatc ccatattgcc cgacctcgat
     5401 cgacaggcct ttggcccatg cgtggatgcc ggctttggcc gagaaggcag cgttgaggtg
     5461 gtcgggttca ctcttcccgg tgatattgat gatgcggccc cagcggttct cgatcatttt
     5521 cggcaacaaa gcgtgcgcca gctggcgcgg ccgggtgaag ttcaaggtca tcgcttcgac
     5581 ccaacgttcc tcggcggcat cgaccggcag gcggcggctg ccaccggcgt tgttcaccag
     5641 aatgtcgatc tgaccgacgg cttcatacgc ggcatcgcgc aacttcatcg cggcgccttc
     5701 ctccatcaca tcctgccgga tcagaacggg tcgcggatgt tgcgccgctt cgacctcatc
     5761 ggccatacgt tccatttcct ccagccggcg ggcagcgccg accacgcgca ccccttcagc
     5821 cgcgagcgct ttggctatgg cacggccgat acccatgctg gcgccggtga cgagcgcggt
     5881 cttgccgcga agttgcagat ccatgggtca gcgtcccttg acgttcggct tgcgtttctc
     5941 gaagcacgca gcgcgcgtga cgcgtgctcc ggtagtgtgg tgccgcgtgt gccataggtt
     6001 cgctggcggg tccaggatgg caggaaggcg cttctcagtc gccgccttgc ggtgcccgga
     6061 agccgccgac cccacgctcg atctccgtca catgccgcgg caggaacccg ccgggatcgt
     6121 tcagaccgca cgagtgcgca atggtatcca cgtcctcgcg catgcgctcg gcgtaacgcg
     6181 ccacccgcgc agccttgtcc gtcggatcga gcccggcgat caaccgttcc tccgaggacg
     6241 taacgccggt tgggcatttg ccgctgccgc acttcatcgc ctggatgcag ccgagggaaa
     6301 acatgaagcc ccgggcggag gaaacgaaat cggcgcccat gcagagagcc catgcgacct
     6361 tgtccggcgt aaccagtgtg ccggcggcga tgatacggat gcgatccttt aacccgggac
     6421 gctcacgcgc ggcggcgacc tgcggcaagg
//
LOCUS       DATAVD010000678         3498 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2484346, whole genome shotgun sequence.
ACCESSION   DATAVD010000678 DATAVD010000000
VERSION     DATAVD010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3498
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2484346"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VHX39_12860"
     CDS             <1..255
                     /locus_tag="VHX39_12860"
                     /inference="COORDINATES: protein motif:HMM:NF021498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Wadjet anti-phage system protein JetD
                     domain-containing protein"
                     /protein_id="HEX3992054.1"
                     /translation="ILSRARSVIPHLRSILMDEQTLLLHRDMWVEEPNPCDQSEAPML
                     TQDEQKVFTALHQNRWATRLRLEQERVAWDYAWDNISHAF"
     gene            921..2099
                     /locus_tag="VHX39_12865"
     CDS             921..2099
                     /locus_tag="VHX39_12865"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3992055.1"
                     /translation="MKLSAFTFLTCLLSLAAARDLPAQDLAIANARIITGTGMVINSG
                     SIVIRGGKIVSVAGGAPNATGIRTIDAKGMSAMAGFIDAHRHVNIGPMEKVQMQQLLE
                     AGYTTVLSGGGPADGNITLRDHIESGMINGPRIIPSGTVRLTLSPDEARAEVRKMAAM
                     GIKFTGEISLTPKPGPRAQEIETLRAILDEAKKSGVWVQVHAVSPQAMMAAVDAGVTK
                     LVHTPHFGWLSFEDAKKVSAAGVKQLSTIGFGVPVFGVFADDNKPRFRDGKPWPESIL
                     QGDGRGQEAGYKAVNARTSWDAGVIYGYGTDTTYEPRAGLNQELKALNLMFSMQDIIK
                     LMGPNTASYIEMSDQLGTLEPGKLADIAILDGNPLEGYWNMLNAKVVVKGGVVVVDKR
                     "
     gene            2223..3242
                     /locus_tag="VHX39_12870"
     CDS             2223..3242
                     /locus_tag="VHX39_12870"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /protein_id="HEX3992056.1"
                     /translation="MIELVDYIREKRILFVISGGVAVLLALAASLVLPKQYTAKSTVL
                     IDAPNGSDPRVATAMTPAYLESLKTYETLASSDTLFSRAAERLHVEGSKVSVLKVSRP
                     GSTAVIEISATLRDPKKAQALAQDIADQAVELDGTIESKSADDPSEQRLKEAVQARAT
                     FEAVNPIEPLENEVQEGFEAELQLDQDLARARTDLTEKSAATEPSPVQSVSLQTRIRA
                     METQRRELAALLENNASQLDARKSRRKELEDAETAVRATYEIKRRTFNDAPFSQSSST
                     KSRGRLHVIDPGIVPQHASFPNIPLNVAAAFAASLAGALAWLMLRFSYVRLQRERSER
                     LYSLR"
     gene            3245..>3498
                     /locus_tag="VHX39_12875"
     CDS             3245..>3498
                     /locus_tag="VHX39_12875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992057.1"
                     /translation="MTPASRTAADQSTVDRSSLAAVLLGVWAAVVGLAPTPEYKLLAT
                     LPLLAGAVAWWTILTPERWLAFFFFCSLLLPPLPFPFGNSG"
BASE COUNT          741 a          992 c         1073 g          692 t
ORIGIN      
        1 atactgagtc gtgcccgatc tgttatcccg catctacgct ctattcttat ggacgagcaa
       61 acacttcttc tccatcgcga catgtgggta gaagagccaa atccgtgcga tcagtctgag
      121 gcgccgatgc tgacacagga cgaacaaaaa gtttttaccg cactgcacca gaatcgttgg
      181 gccacccgac tccgcctcga acaggaacgt gttgcctggg actacgcctg ggacaacata
      241 tcccatgcct tttgagacgg tgtgttgacc tccgtgccaa tccgcttcgg ctgcaaatgc
      301 aagcggtcct ggcggcaatt ctcccgctga atcatcagaa tgctggccga ccgcaggtgg
      361 tcgcgacggc aagagttctc tgcgatcttg ggccaactcg aacaagccag ccgcgacgcc
      421 gacggcaaga acggccgcgt ggcctcactc cagtgtgcgg cagattcgaa gcggccggga
      481 cgtgtcacgc cgttcgtcaa acggacgttg acgaatgagg gaacattttt atttcctgtg
      541 gaatcagatg cttcccccat taattcgacc gttatggttc gtttcaggcg tctcgtagtg
      601 tagcgtccaa tcgtaagagt gtagcgtcca atcgtaagaa cctgttcgca cccatggcgt
      661 gtcgggtcac taaaccacgt aatcctcgag gctctgcctg cgtgaatgta gaaacaatgg
      721 gcggcaggcg ctcccgttat ggtgtggccg cagtccggac tgcgaaatca aacagcgctc
      781 gtctgagcga tatcgggcag gaagcgctcc acattattcc tgacaacttt caccgccggc
      841 gatctccttc cggcttccgg gatccggccg gccggagtat gcttgatctt ccgcatgatt
      901 aagatcggag aacgacaccc atgaaactat ccgctttcac ctttctcacc tgcctgctga
      961 gtctggccgc tgcgcgagat cttccggcgc aggatctggc gatcgccaat gcgcggatca
     1021 tcaccggcac gggcatggta atcaattctg gttccatcgt cattcgaggc gggaagattg
     1081 tttccgtcgc ggggggtgcg cccaatgcga ccggaattcg gacgatcgat gcgaagggca
     1141 tgagcgcgat ggcgggattc atcgacgcgc atcgccacgt taatatcggt ccgatggaga
     1201 aggtgcagat gcagcagctt ctcgaagcgg ggtatacaac ggtgctgtcc ggaggcggtc
     1261 ccgcggacgg aaatatcacg ctgcgggacc acatcgagag cggcatgatc aatgggccgc
     1321 gcatcattcc ctccggaacg gtgcgcctga ctctgagtcc tgacgaagct cgcgcggaag
     1381 tgcggaagat ggccgcgatg ggaatcaagt ttaccggcga gatctctttg acccccaagc
     1441 cgggaccaag ggcgcaggaa atagaaactc tccgggcaat tctggacgag gcgaagaagt
     1501 cgggagtttg ggtacaggtg catgccgtga gcccgcaggc catgatggcc gcggtggatg
     1561 ccggcgtgac gaaactcgtc cacacgcccc acttcggctg gctgagcttt gaagacgcga
     1621 agaaggtgtc ggcagcgggt gtcaagcagt tatcgacgat tggattcgga gtgccggttt
     1681 tcggggtgtt tgccgacgac aacaagcccc ggttccggga cggaaaaccc tggccggagt
     1741 cgattctgca gggtgacgga cgcggccagg aagcgggtta taaagcggta aatgcgcgca
     1801 cttcgtggga tgcgggcgtg atctacggtt acggcaccga cacgacttac gaaccgagag
     1861 ccggtctgaa tcaggagttg aaggcgctga acctgatgtt ctccatgcag gacatcatta
     1921 agctcatggg gccgaacacc gcttcctaca tcgagatgag cgatcaactc ggcacgctgg
     1981 agccgggtaa gctggccgat atcgcaatcc tggacggtaa tccgctggag ggttactgga
     2041 acatgctgaa cgcgaaagtg gtggtgaagg gcggcgtggt agtcgtggac aagcgttagg
     2101 tgagcgccag gtaagcatca caataagact cgcgattggc ctgaaatttg ttccggcgtt
     2161 cccgcccagc gggtctaacc cgtcagagca atttttccgt gcacggatcc aatggtttcg
     2221 atgtgatcga actcgtcgat tacatccgcg agaagcgcat tctcttcgtc atttccggcg
     2281 gagtggcggt gttgctggcg ctggccgcca gcctcgtgtt gccgaaacag tacaccgcca
     2341 agtccacggt cctgatcgac gccccaaacg gcagcgatcc gcgtgtcgcg acggcgatga
     2401 cccctgccta tctggagtcc ctgaaaacct acgagacgct ggcgtcgagc gacacgctat
     2461 tctcgcgggc ggccgaacgc ctgcatgttg agggatcgaa agtgagcgtc ctcaaggttt
     2521 cgagaccggg gagtacggcg gtcatcgaaa tcagtgcgac attgcgcgat ccgaagaagg
     2581 cccaggcgtt ggcgcaggac atcgcggacc aggcagtcga actcgacggg acaattgaaa
     2641 gcaaatcagc ggacgatccg tcagagcagc ggctgaagga agcggtgcaa gcgcgagcca
     2701 cgttcgaagc ggtcaatccg atcgagccgc tcgaaaacga agtgcaggag ggcttcgagg
     2761 cggaactgca actggatcag gacctcgcgc gcgcgagaac tgacctgact gagaagagcg
     2821 cggcaacgga accctcgcca gtgcagagtg tctctttgca aacccgaatt cgagccatgg
     2881 agactcaacg gcgggaactc gcagcactgt tggaaaacaa tgcttcccag ctcgatgcgc
     2941 gcaagagccg ccggaaagaa ctcgaagacg cggaaacggc ggtgcgtgcg acatacgaaa
     3001 tcaagcgcag gacgttcaac gacgctccgt tttctcagtc gagctctacg aaatcccgtg
     3061 gacgactgca cgtgatcgat ccagggatcg tcccgcagca cgccagtttt cctaatatcc
     3121 cgctgaatgt tgccgcggcc tttgcggctt cgctggccgg agcactggcg tggctcatgc
     3181 tgcggttcag ctacgtgcgg ctgcagcgag aacgatccga gcgcctttat agtttgcgct
     3241 gatcatgacg ccagccagcc gcaccgctgc cgatcaatcc accgtcgaca gatccagctt
     3301 ggcggcggtg ctgctgggcg tttgggcagc cgtcgtcgga ctggcgccga ctcccgagta
     3361 caaactgctc gcgacacttc ctctgctggc gggcgcggtg gcctggtgga cgattcttac
     3421 tccggagcga tggctcgcat tcttcttctt ctgttctttg ctgttgccac cgctgccgtt
     3481 tccctttggg aactcggg
//
LOCUS       DATAVD010000679         3056 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2854723, whole genome shotgun sequence.
ACCESSION   DATAVD010000679 DATAVD010000000
VERSION     DATAVD010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3056
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2854723"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..385)
                     /locus_tag="VHX39_12880"
     CDS             complement(<1..385)
                     /locus_tag="VHX39_12880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3992058.1"
                     /translation="MTTHGKWQFWIDRGGTFTDIVARAPDGTLSTHKLLSENPGRYRD
                     AALAGIRSVLGVAPNEPIPSDQIDAVKMGTTVATNALLERKGDRTLLIVNRGFADALR
                     IGNQARPRLFDLAITLPSMLYERVEE"
     gene            452..1825
                     /locus_tag="VHX39_12885"
     CDS             452..1825
                     /locus_tag="VHX39_12885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEX3992059.1"
                     /translation="MSLPNTTLAAAYEAMTPGSARLAEKARGLFPSGLTHDSRHFDPW
                     PIYVTHGQGPVKWDVDGNRYVDYFGGHGALILGHGNPVVQQAVHAAFDRGSHFGASHE
                     AEIRWAELITQMVPSAERVRFTNSGTEATLMALRLARAYTGRQKIVHFRGHFHGWHDH
                     LSNGYSNHFDGTPTTGVLAGIADNVLLADPNDVAGIDSLFSDHKDIAAVILEPTGASF
                     GKMPIVPAFLQHLRDLTKQAGTILIFDEVVTGFRVSPGGLQKVIGVTPDMTTLAKILA
                     GGLPGGAVVGRKEILDLLDFDVTKAQGKEKIGHQGTFNANPVSAAAGIATLQILATTD
                     ACERANRYGATLRSRMNEVLEDEQVKWAVYGTYSGMHIFTNPDGDDIVPSQFDAVPFV
                     PRMINKSRHDGMPVKVRMGLLVNGVDVNTGPSGTISASHGEEEMVLTVDAFRATVRAL
                     KREGAIG"
     gene            complement(1848..2480)
                     /locus_tag="VHX39_12890"
     CDS             complement(1848..2480)
                     /locus_tag="VHX39_12890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992060.1"
                     /translation="MAKGILLVAFDYSKAQADEFHDWYDLEHIPERQRVTGFGTCERW
                     ISVANPKQAVASYELDSLAVLKSAPYRAIAYENLSVWSKRMGKIAQRMLRHDGEEILP
                     GDLAGPVGAGGLLVNAMNVDPAHEQEFNEWYDNEHIPSLAAVPGTLCARRFRDTKGTH
                     RYLALYHLQSPDVPLTAAWKKAAGTPWTERLRPHFRDHLRILTKRYVRGG"
     gene            complement(2500..>3056)
                     /locus_tag="VHX39_12895"
     CDS             complement(2500..>3056)
                     /locus_tag="VHX39_12895"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3992061.1"
                     /translation="RNGQAPAERWHTDHTNRERPPAATMLYGVAIPSKGGNTSIANMR
                     IAYDLLAEDEQARLRELRTVNMLDDHHRDIRPEDMEKFGTPIVHPMVRTHPVHGSPAV
                     YFHITKTAYIEGMTPDDSRAYLTDLLDRLIQPEIVYTHQWRRGDVLVIDDRATMHRAH
                     GDYDRSESRILWRIIVEGDRPVLM"
BASE COUNT          570 a          908 c          959 g          619 t
ORIGIN      
        1 tttcctccac ccgctcatac agcatactgg gcagcgtgat ggcgaggtcg aacagccgcg
       61 ggcgagcctg attgccgatg cgcaatgcgt ccgcaaagcc tcggttgacg atcagcaagg
      121 tgcggtcgcc tttgcgttca agcagcgcgt tggtggcgac cgtggtgccc atcttcaccg
      181 cgtcgatctg gtcggacggg attggctcgt ttggcgccac gccaagcact gagcggatgc
      241 cggccagcgc ggcgtcgcga tagcggcccg ggttttccga cagtagtttg tgggtggaca
      301 gcgtgccgtc aggcgcgcgg gcgacgatat cggtgaatgt gccgccgcgg tcgatccaga
      361 attgccattt gccgtgggtc gtcatgccag cctctgggtt tgtcctattg gcttgtatag
      421 gatcgcccag agaatccgag aggcgtcgat catgtccctg cccaacacca cgctggccgc
      481 agcctatgag gcaatgactc cgggctccgc tcggctcgcc gagaaggcgc gcggcctgtt
      541 tcccagcggg ctcacgcatg acagccggca tttcgatccc tggccgattt acgtcacgca
      601 cgggcagggg ccggtgaagt gggatgtcga tggcaaccga tatgtggact atttcggcgg
      661 acacggcgcg ctgatcctgg gacatggcaa tccagtggtg caacaggcag tacacgccgc
      721 gttcgatcgc ggcagccatt tcggtgccag ccacgaggcg gaaatccgtt gggccgaact
      781 gatcacgcaa atggttccat cagcagaacg ggttcgcttc acgaattccg gaaccgaggc
      841 cacattgatg gcgctgcggt tggctcgggc ttacaccggg cgtcagaaaa tcgtgcattt
      901 ccgggggcac ttccatggtt ggcacgacca tctgtcgaat ggctactcca accatttcga
      961 tgggacaccg acgaccggcg tgctggccgg cattgccgac aacgtgttgt tggctgatcc
     1021 gaacgatgtc gcggggatcg acagtttgtt ctccgatcac aaggacattg ccgccgtgat
     1081 cctggagccg accggcgcca gctttggcaa aatgccgatc gtgccggcgt ttctgcagca
     1141 tttgcgtgac ctgaccaaac aagccggcac gatcctcatt ttcgatgagg tggtgactgg
     1201 gttccgggtc tcccctggtg ggctgcaaaa ggtcatcggg gttacgccgg acatgacgac
     1261 attggcgaaa atcctggccg gcgggctgcc gggcggcgcg gtcgttggcc gcaaggagat
     1321 ccttgatttg ctggacttcg atgtcaccaa agcccaggga aaggagaaga tagggcatca
     1381 gggaacattc aacgcgaacc cggtatcggc ggcagcgggc attgcgacat tgcagatcct
     1441 ggcaacgacc gatgcatgcg agcgggccaa tcgctatggc gcaacgttac ggtcgcggat
     1501 gaacgaggtg ctggaagacg aacaggtaaa gtgggctgtg tacggcacgt attccggtat
     1561 gcacatcttc accaatccgg acggtgacga catcgtgccg tcgcaattcg atgcagtgcc
     1621 gttcgtgccg cgaatgatca acaaatcacg ccacgacggc atgccggtga aagtgcggat
     1681 gggcctgctg gtcaatgggg tcgacgtgaa taccggccca tccggtacca tctccgccag
     1741 tcatggtgag gaggagatgg tactaaccgt tgacgcgttt cgcgcaaccg taagggcgtt
     1801 gaagcgggaa ggggcaatcg gctgagcgag ttcgcgggcg gcttctctca ccccccgcgc
     1861 acgtaccgct tcgtcagtat ccgcagatga tcgcggaaat gcggccgcaa ccgttccgtc
     1921 cagggcgtcc cggcggcttt tttccaggcc gctgtcagcg gcacatccgg tgattgcagg
     1981 tgatacagcg ccaaataacg gtgcgtcccc ttcgtgtcgc ggaaccgccg ggcgcacagc
     2041 gtccccggaa ctgcggcaag cgacggaatg tgctcgttat cgtaccattc gttgaactct
     2101 tgctcgtgcg ccgggtcgac gttcatcgca ttcaccagca gaccgccggc acccactggg
     2161 ccggccaggt cgcccggcag gatctcctcg ccatcgtgcc gcagcatacg ctgtgcgatc
     2221 ttgcccatgc gttttgacca gaccgacagg ttctcatatg cgatcgcgcg atacggcgcg
     2281 cttttcaaaa ctgcaagact gtcgagctca taactcgcaa ccgcctgttt cgggttcgct
     2341 acgctgatcc accgctcaca ggtgccgaag cctgtcacgc gttgccgctc cggaatgtgt
     2401 tccaggtcat accaatcatg aaactcgtca gcctgagcct tggaatagtc gaacgcgacg
     2461 agaaggatac ccttcgccat ggtttgctcc ctgaatgtct tacatcagca cgggtcggtc
     2521 gccctcgacg atgatccgcc acaggatccg gctctcgctg cggtcataat cgccgtgcgc
     2581 gcggtgcatg gtcgcccggt cgtcgatcac cagcacgtcg ccgcggcgcc attgatgcgt
     2641 gtaaacgatc tcaggctgga tcaaccggtc cagcagatcg gtcaggtagg cgcggctgtc
     2701 gtccggcgtc atgccctcga tatacgcggt cttggtgatg tggaaataca cggccggcga
     2761 gccatgtacc ggatgcgtcc gcaccatcgg atgcacgatg ggagtaccga atttctccat
     2821 atcttccggg cggatatctc ggtgatgatc atccagcatg ttgacggtgc gcagttcgcg
     2881 taaccgggcc tgctcgtctt ccgccagcaa gtcgtacgca atgcgcatat tggcgatgct
     2941 ggtgttgccg cccttggacg ggattgcaac gccatacagc atggtcgcag ccggtggtcg
     3001 ctcgcgattc gtgtggtcgg tatgccaacg ttccgccggt gcctggccat tgcgat
//
LOCUS       DATAVD010000680         2026 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2484872, whole genome shotgun sequence.
ACCESSION   DATAVD010000680 DATAVD010000000
VERSION     DATAVD010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2026
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2484872"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2007)
                     /locus_tag="VHX39_12900"
     CDS             complement(<1..2007)
                     /locus_tag="VHX39_12900"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4118 domain-containing protein"
                     /protein_id="HEX3992062.1"
                     /translation="MRHYFAPGNLSALRELAMRRAADRIDIQVRGFRQAQGDTASWAA
                     HERILVCVDEREGAVEVVRHAKRLADRARASWLAVHVQTGRDRALTVPERARVNEALR
                     LATRLGAESATLPGDRVSNTILAYASEQNVTQIVVGKAKRPLWFTAIFGSVVGDLINH
                     SESIAVHVVPEESSSAKQQKIGAVVPSSALTPRGLAEAAVGTVGAIAIAVPLDRWLGV
                     PNLGLIFLAPVLVSALRSGLWPALVAAMFSVLAYDFFFTEPRMTFSVHDPQAVVSLIA
                     FSGAALVVSSLAAQARDQTLAARTEARTSRELLGLARGLAAVAGEDEVARTLASYTAR
                     AFDAECAVFARVGLSGLRLAATAPGTPTLTDADMAAVHWTADKGTPAGKGTDTLSGVR
                     WFFIPLRTARLFSGVLAIAREAELSPAERRRMDAMADQGASALERAHIARAFEEARVE
                     MDAEKLRATMLASLSHDLKTPIAGILGAVSSLRAYGERHDAATQAELLASIESEADRM
                     QRYVVKLLDMTRLDAGGVNARLEALEVSDIVSSVMKRAATIADGVRLVAEVEPGLPMV
                     KGDGALLHQALLNLVENAVLHGGKGTVTVQVRLRDGAMEFLVLDEGPGLPADGETKLF
                     EKFWRGENTAAGGTGLGLPIVKGFAGLMGASVTAHNRHDGKGAVF"
BASE COUNT          371 a          718 c          603 g          334 t
ORIGIN      
        1 gaataccgca cctttgccgt catgccggtt gtgcgcggta accgacgcac ccatcaggcc
       61 ggcaaaaccc ttgacgatgg gcaggccaag gccggtgccg cctgccgccg tgttctcgcc
      121 gcgccagaat ttttcgaaca attttgtctc tccatcagcc ggcaagccgg gaccctcgtc
      181 gagcaccagg aattccattg caccatcgcg cagcctgacc tgcacggtca ccgtgccttt
      241 gccgccatgc aggaccgcat tctccaccag gttcagcagc gcctgatgca gcaacgcacc
      301 atcgcctttc accatcggca atcccggctc gacttcggcg accagccgga cgccatcggc
      361 gattgtcgcg gcgcgtttca tgacggagga aacgatgtcg gacacctcca gcgcctccag
      421 cctcgcgttc acgccgccgg cgtccagccg cgtcatgtcg agcaatttga ccacgtaacg
      481 ttgcatccga tcggcttccg actcgatgct agccagcagt tccgcctggg ttgccgcatc
      541 gtgccgctcg ccataagcac gcaacgagga taccgcaccg aggatccccg cgatcggagt
      601 tttcaggtcg tgcgacaacg aggcaagcat ggtggcgcgc aatttctcgg cgtccatttc
      661 cacccgggct tcttcgaacg cccgcgcgat atgtgcccgt tccagcgccg aggcaccctg
      721 atcggccatc gcatccatgc gccgccgttc tgcgggcgac aattccgcct cgcgcgcgat
      781 cgccagcaca ccggagaaca accgcgcggt gcgcaacggg atgaagaacc agcgcacacc
      841 ggacagcgta tcggtgccct ttccggccgg cgtgcctttg tccgcggtcc aatgcaccgc
      901 cgccatgtcc gcatcggtca atgtcggcgt tcccggtgcg gtggcggcca gccgcaagcc
      961 gctcagtccc acccgtgcaa aaaccgcgca ttccgcatcg aacgcccgcg cggtgtagct
     1021 ggcgagcgtg cgcgccactt catcctcgcc ggccaccgcg gcgagcccac gggccaggcc
     1081 cagaagttcg cgcgaggtcc gcgcctcggt gcgcgccgcc aaggtctgat cgcgcgcctg
     1141 cgccgccagc gatgatacga caagcgccgc cccactgaat gcgatcagcg agacgaccgc
     1201 ctgcggatcg tgtacgctga aggtcatgcg cggttcggtg aagaagaaat cgtaggcgag
     1261 cacgctgaac attgccgcca ccaacgccgg ccacagcccc gaccgcaacg cgctaaccaa
     1321 caccggagcc aggaagatca ggcccaaatt cggcacgcca agccagcgat ccagcgggac
     1381 ggcgatcgcg attgcgccca cggttccaac cgccgcctca gcgaggccgc gtggggtcag
     1441 tgcggaagac ggcacgaccg caccgatttt ctgctgtttc gcgctggagc tttcctccgg
     1501 cacgacgtgc acggcaatgg attccgagtg attgatcaga tccccgacaa ccgagccgaa
     1561 gatcgcagtg aaccacagcg gccgttttgc tttgccgacg acaatctgag taacgttttg
     1621 ttcgctggca taagccagga tcgtattcga cacccgatca cccggcagag tcgcgctctc
     1681 ggcaccgagc cgcgttgcca gtcgcagagc ctcattgacg cgagcacgtt ccggtaccgt
     1741 aagcgcccga tcccggccgg tctgcacatg caccgcgagc caactggcgc gcgctcgatc
     1801 ggcgagacgt ttcgcatggc ggacgacttc caccgcccct tcgcgttcgt cgacacaaac
     1861 caggatccgt tcgtgagcag cccaggaggc ggtgtcgcct tgggcctgtc ggaagccgcg
     1921 gacctggatg tcgatacggt cggccgcacg gcgcatcgcc agttcgcgca acgccgacag
     1981 gttgccgggt gcgaaataat gtcgcatggc gcggcgtgcc tggtcg
//
LOCUS       DATAVD010000681         1509 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_811221, whole genome shotgun sequence.
ACCESSION   DATAVD010000681 DATAVD010000000
VERSION     DATAVD010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_811221"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="VHX39_12905"
     CDS             complement(<1..346)
                     /locus_tag="VHX39_12905"
                     /inference="COORDINATES: protein motif:HMM:NF022086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tube protein"
                     /protein_id="HEX3992063.1"
                     /translation="MSGSTSQSLGIIDLIWGGTKINVDTKSATFQRGGLVSTPVVAGR
                     TVSQGQQFVAPKVSAKFPLMNGMSLDTLIALNGTEMQIKCDSGQTYIINGAFFSGDPK
                     VTGGPGSNVSAEW"
     gene            complement(354..>1509)
                     /locus_tag="VHX39_12910"
     CDS             complement(354..>1509)
                     /locus_tag="VHX39_12910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992064.1"
                     /translation="PGTLPILIGGIRVATPVNIGDTAADVAANFYAQCQLQGQPGYPY
                     FPSVAATYVAAALSVALTCQHGGTLGNNIDVRVSTQSGDEVPAGLSVTITPMTGGATD
                     PDADVAAAFSGLTNTWYTDVAFAWTDLTNVDMLTSWAAERYGAMVKLDVQAYVGLGGT
                     YGTILNFAPNSQYLSPLPMQNPLTAPWAFAASLAGACCYSTAQKPSLQMRTVPLPGVV
                     APAEADLFTLPEREVLLQSGFSTFTVDSTGIVYLERVTTSYRTDPSGVLNSAWFDLSS
                     VKVPTRVRYDWDGYISLLYPRNNLTDDGTIGADYDPDAVTPSRLLGSWAARSTVYEQN
                     GWIQNSATTVKASSFAIDPNDGNRVNARQQIQIMGNLIVLAGSLEFISNN"
BASE COUNT          287 a          461 c          476 g          285 t
ORIGIN      
        1 accactcggc agacacgttg ctgcccggac cgcctgtcac cttcgggtca ccactgaaga
       61 acgcgccgtt tatgatgtag gtctggccgg agtcgcattt gatctgcatt tccgtgccgt
      121 tcagggcgat caacgtatcc agcgacatgc cattcatcag ggggaatttc gcggagacct
      181 tcggcgccac gaattgctgg ccctgcgaaa cggtacgtcc cgcgactacg ggcgtgctga
      241 ctaggccgcc ccgctggaag gtggccgatt tggtgtcgac gttgatcttc gtgccgcccc
      301 agatcaggtc gataatgcca agggattgtg aagtgctgcc ggacatagct acctcagttg
      361 tttgagataa attcaaggga accggccagc acgatcaggt tgcccatgat ctgaatctgc
      421 tggcgggcat tcacgcggtt gccgtcgttc gggtcgatcg cgaatgagct ggctttcacc
      481 gtcgtcgcgg aattttggat ccagccattc tgctcgtaga ccgtgctacg tgctgcccaa
      541 ctgcccagta ggcgggacgg cgtcacggca tcgggatcat aatccgcgcc gatcgtgcca
      601 tcatccgtca ggttattgcg cgggtagagg agcgagatat acccgtccca gtcgtaacgc
      661 acccgcgtcg gcaccttcac cgaactcagg tcgaaccaag cgctgtttag caccccgctg
      721 gggtcggtgc ggtagctggt ggtcacacgc tccaaataaa cgatcccggt cgagtccacc
      781 gtgaaggtgg agaaaccgga ttgtagcagc acctcgcgct ccggcagcgt gaacagatcc
      841 gcctcggccg gcgcgacaac gcccggaagc gggacggtgc gcatctgcaa gctcggtttc
      901 tgtgccgtgg aatagcagca tgctccggcc agagaggctg cgaaggccca cggcgccgta
      961 agtgggttct gcatcggcaa tggggacagg tactgggagt tgggcgcgaa attcaggatg
     1021 gtgccatacg tgccgcccaa gccgacataa gcctggacat ccagcttcac catcgcgccg
     1081 tagcgctcag ccgcccagct tgtgagcatg tcgacgttgg tcaggtccgt ccaggcaaac
     1141 gccacgtcag tgtaccacgt attggtgagg ccggagaacg cggcggcaac atcagcatcc
     1201 gggtcggtcg caccgccggt catgggcgtg atggtcacgg aaagtccggc gggcacctcg
     1261 tcgccagact gggtgctgac gcggacatcg atgttgttgc ccagcgtgcc gccatgctgg
     1321 caggtcagcg ccaccgaaag cgcggctgct acatacgtgg ccgccacact cgggaagtac
     1381 ggatagccgg gctgtccctg cagctggcac tgcgcataga aattcgccgc cacatccgcc
     1441 gccgtgtcgc cgatgttcac cggcgtcgcc acgcggatcc caccaatgag gattggcagc
     1501 gtgccgggc
//
LOCUS       DATAVD010000682         1864 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_64126, whole genome shotgun sequence.
ACCESSION   DATAVD010000682 DATAVD010000000
VERSION     DATAVD010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1864
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64126"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VHX39_12915"
     CDS             <1..651
                     /locus_tag="VHX39_12915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992065.1"
                     /translation="LPMNRLLVPKAAPHAAELTTAHDAPGGVPWTMVILAGVFGATWF
                     VSTAMASHLPRLLEALGVTPALAIAGASLVGPAQVGARLVEFGLLRRLSPMISARLAT
                     GLHPLGAMLLAGFGPVAAIPFVLLHGAGNGMLTIARGTLPLTLFGPAAYGLRTGILSA
                     PARILQGGAPLLFGFVLDNGGPLYALLLSGTLTGLSFLALFALKSSAASKVSPKVR"
     gene            complement(763..>1864)
                     /locus_tag="VHX39_12920"
     CDS             complement(763..>1864)
                     /locus_tag="VHX39_12920"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007398186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HEX3992066.1"
                     /translation="GKMSCASCHSPEHAFGPADGLAVQAGGVDLHQPGRRAVPSLMYL
                     QDVPQFTEHYFENEDEADESIDNGPTGGLTWDGRVDRGADQARIPLLSSFEMANRSPD
                     AVVAMVRSATYADEMRRVFGSNLFGNVTQTFAAVLKCLEVFEQDYRTFYPYSSKYDAW
                     LSGRAELTPREARGLAAFKDPQKGNCSHCHISERGLDGTPPQFTDYGLIALGVPRNPT
                     IPANAEPNFYDLGMCGPDRTDMRDHPDYCGRFMTPTLRNVATRHVFFHNGVFHTLREV
                     VVFYAERDTNPAKWYPRASDGNIHKYDDLPARYQSNVNVEPPFDRQRGDKPALSSTDV
                     EDIIASLQILTDGYSGEASSVESGRRTAQFRH"
BASE COUNT          326 a          571 c          575 g          392 t
ORIGIN      
        1 ttgccgatga accggttgct ggtgccgaaa gccgcaccgc acgccgccga gctcacgacg
       61 gcgcacgatg cgcccggggg cgtgccgtgg acgatggtga tcctggccgg ggtgtttggc
      121 gccacgtggt tcgtttcaac cgccatggcg tcacacttgc cgcgcctgct ggaagcgctt
      181 ggggtaacgc cggcgctcgc catcgctggt gcttcgcttg tcggcccggc gcaggtgggt
      241 gcgcgcctgg tcgagttcgg cctgctgcgc cggctgtcgc cgatgatttc ggcacgcctc
      301 gcaaccggcc tgcatccgct tggcgcgatg ctgctggcag ggtttggacc ggtcgcagcg
      361 attccgttcg tcctgctgca tggcgcgggc aatggcatgc tgacgatcgc acgcgggacc
      421 ttgccgctga cattgttcgg cccggctgcc tatgggctgc ggaccggcat cctgtccgcc
      481 cctgcccgaa ttctgcaagg cggcgcgccg ctgttgtttg gcttcgtcct tgacaatgga
      541 ggaccgcttt acgccctgct gctctcgggc acactcaccg gcctgtcgtt tctggcgctg
      601 ttcgctctga agagctcggc agcgagtaag gtctcaccga aagtaaggta gcctctatac
      661 acgtaatcct gatatatgtt cggccggggc ggaattccga cagggcgtga attaccccga
      721 tcaaccacag acacggagca cgttcgcccc gtactccacc gctcaatgcc tgaactgcgc
      781 cgtcctgcgt cccgattcaa ctgacgatgc ctcaccggaa tatccatcgg tcagaatttg
      841 caaggatgca atgatatctt cgacgtccgt agatgaaaga gccggcttgt cgccccgctg
      901 gcgatcaaac ggtggttcca cgttgacgtt ggattggtac cgtgcgggca ggtcgtcgta
      961 cttatgaatg ttgccatcgg aggcacgcgg ataccattta gctgggttgg tatcgcgttc
     1021 tgcataaaac actaccacct cgcgcaacgt atggaacacg ccattgtgga agaaaacgtg
     1081 tcgggttgcg acgttgcgta aagtaggcgt catgaagcgc ccgcagtagt ccggatgatc
     1141 tcgcatatcc gtgcggtcgg gaccacacat gccaaggtcg taaaagtttg gctcggcatt
     1201 tgccgggatc gtggggttgc gtggcacgcc gagcgcgatc aagccgtagt cggtgaactg
     1261 cggtggcgtg ccgtcgagcc cacgctcgct gatgtggcaa tgactgcaat tgcctttttg
     1321 cgggtccttg aaagcagcca gcccacgcgc ttcccgcggt gtcaattcgg cccggccaga
     1381 cagccaggcg tcgtatttgc tgctgtaggg ataaaatgtt cggtagtcct gctcgaacac
     1441 ctccaggcat ttcagaacgg cggcgaacgt ctgggtgaca ttgccaaaca ggttcgaacc
     1501 gaacacgcgt cgcatttcgt cggcgtatgt cgcgctgcgt accattgcga ccactgcgtc
     1561 gggcgaccga ttcgccatct cgaacgatga aagcagcggg atgcgcgcct ggtctgcgcc
     1621 gcggtccacc ctgccatccc atgtcaggcc gcccgtcggg ccattgtcga tgctttcatc
     1681 ggcttcgtct tcattttcga aataatgctc ggtgaattga gggacatcct gcaaatacat
     1741 tagcgacggc accgcgcggc gccccggctg atgcagatca acgcccccgg cctgaaccgc
     1801 caacccgtct gccggaccga aggcatgctc ggggctatga caggacgcac aggacatctt
     1861 gccg
//
LOCUS       DATAVD010000683         2248 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_64392, whole genome shotgun sequence.
ACCESSION   DATAVD010000683 DATAVD010000000
VERSION     DATAVD010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64392"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1159
                     /locus_tag="VHX39_12925"
     CDS             <1..1159
                     /locus_tag="VHX39_12925"
                     /inference="COORDINATES: protein motif:HMM:NF005720.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="flavin-dependent oxidoreductase"
                     /protein_id="HEX3992067.1"
                     /translation="VQQPRELGVGINTLPHAIKELAALGLLPALDSAGIRTRELIYAN
                     RFGQVVWRELRGLDAGLDTPQFSIHRGKLHTLLLDAVRERLGDQAVQTGCRLIAFTEH
                     SDRVEARFEQRDNGETITAGGDVLIGADGINSLTRAKFYPDEGPPVWNGSMLWRGAAD
                     WPVYQDGRTMVISGGMAAKFVFYPIHCDPASPSRRLTNWAVIARTADTSAMPPRREDW
                     NRPGEWSEIEPFVRDHFQLDFVDPLALIRASGTFYEYPLCDREPLPRWSFGRATLLGD
                     AAHPMYPVGSNGASQAVLDAVALARHLASGVPVPEALAAYDAERRPMTTEIVLNNRKG
                     GPERVIDVLEERAPKGFTDVEAVASLAEREAIVRGYASMAGFAREQVNRKP"
     gene            complement(1160..1612)
                     /locus_tag="VHX39_12930"
     CDS             complement(1160..1612)
                     /locus_tag="VHX39_12930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020591161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3992068.1"
                     /translation="MPNPPEMTAGVTPEGSSVNGLVWNILGQTYTPLQVTDSSFSWHA
                     LLPPATFVPPHIHPTQDEFVYMLEGTFDLVLDGQSSNAKAGDLIRLPRGLPHGLFNNS
                     GANITCLFWVAPTRRLWDLFQAIDNVPDPGEVVRLAAQHEVNFLPPPG"
     gene            complement(1691..>2248)
                     /locus_tag="VHX39_12935"
     CDS             complement(1691..>2248)
                     /locus_tag="VHX39_12935"
                     /inference="COORDINATES: protein motif:HMM:NF014822.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha amylase C-terminal domain-containing
                     protein"
                     /protein_id="HEX3992069.1"
                     /translation="RADSFFAQKRSTLAAALVFTAPGIPMIFMGQEFLEWGAWSDGVF
                     LDWSKATRFAGITQLYRDLIHLRRNWFDNTNGLRGQNVQVYHVNDSDKVIAFHRWDSG
                     APRDDVVIIANFANRSYDAYSFGLPRAGVWKVRFNSDWSGYSPMFTNHQSFDIFAGSQ
                     GADGMPVSGSVGIGPYTALILSQDG"
BASE COUNT          435 a          729 c          685 g          399 t
ORIGIN      
        1 ggtccagcaa ccccgcgaac tcggcgtcgg catcaacacg ctgccccacg ccatcaagga
       61 gcttgccgct ctcggactgc tgccggcatt ggacagcgcc ggcatccgca cccgcgagct
      121 gatctatgcc aaccgtttcg gccaggtggt gtggcgcgag ctgcgcggcc tcgacgccgg
      181 cctcgacacg ccgcaattct ccattcatcg cggcaagctg cacacattgc tgctcgatgc
      241 ggtgcgcgaa cggcttggcg accaggccgt gcaaaccggt tgccgactga ttgccttcac
      301 cgaacattcc gaccgcgtag aagcccgctt cgagcaacgc gacaacgggg aaacaatcac
      361 cgccggcggt gacgtactga tcggcgccga cggcatcaac tcgctcacgc gggcaaaatt
      421 ctatcccgat gaagggccgc cggtctggaa cggctcgatg ctatggcgag gcgcggccga
      481 ttggccggtt taccaagacg gccgcaccat ggtgatctcc ggcggcatgg cggcaaaatt
      541 cgttttttac ccgatccatt gcgaccccgc ctccccatct cgccgcctca ccaactgggc
      601 tgtcatcgcc cgcaccgctg acacttcggc gatgccgccg cggcgcgagg attggaatcg
      661 ccccggggaa tggtccgaga tcgaaccgtt cgttcgcgat cacttccagt tggattttgt
      721 cgatccattg gcgctgatcc gcgcgtcagg cacgttctac gagtatccgc tgtgcgaccg
      781 ggaaccgttg ccgcgctggt cgtttggccg cgccacattg ctcggcgatg cggcgcatcc
      841 gatgtatcca gttggctcca atggcgcgag ccaggccgtg ctggatgccg tcgctctggc
      901 ccgccatttg gcctccggcg tgccggtgcc cgaagcgctg gccgcctacg acgccgaacg
      961 ccggccaatg accaccgaga tcgtgctgaa caaccgcaaa ggcggtcccg agcgcgtgat
     1021 cgacgtgctg gaggaacgcg ccccgaaagg cttcactgac gtggaagcgg tcgcctccct
     1081 tgccgaacgg gaggcgatcg tgcgcggcta tgcctcgatg gccggatttg cccgcgagca
     1141 ggtaaaccgc aagccgtgat cagccgggcg gcggcagaaa attcacctcg tgctgagcgg
     1201 caagacgtac cacttccccc ggatccggca cattgtcgat ggcctggaac aggtcccata
     1261 agcgccgggt gggcgccacc cagaacaggc aggtgatgtt cgccccgctg ttgttgaaca
     1321 acccatgcgg caggccgcgc ggcaggcgga tcaggtcgcc ggcttttgcg ttcgacgatt
     1381 gaccgtccag caccagatcg aacgtcccct ccagcatgta gacgaactca tcctgggtcg
     1441 gatggatgtg cggcggcaca aacgtggccg gcggcagcag cgcgtgccat gagaagctgc
     1501 tgtccgtgac ctgcagcggg gtataggtct ggccaaggat attccagacg aggccgttca
     1561 cgctgctgcc ttccggcgtg actccggcag tcatttcggg cgggtttggc atgacggggt
     1621 ttccctgcga tggagcggca ggatgttaca gacaaggtgc cggacgcaac atgccgggat
     1681 ccaacgacgg tcaaccatcc tgcgagagaa tcagcgccgt ataaggcccg atcccaaccg
     1741 aaccgctgac cggcatcccg tccgcacctt gcgaaccggc aaaaatgtcg aagctctgat
     1801 ggtttgtgaa catcgggctg tatccgctcc aatcgctgtt gaaccgaacc ttccagacgc
     1861 cggcgcgcgg cagcccaaag ctgtaggcat cgtatgaccg atttgcaaaa ttggcgataa
     1921 tcacgacatc gtctctcggc gcgccggaat cccagcggtg aaaggcgatg accttgtcac
     1981 tgtcgttcac gtggtaaacc tgcacgtttt gcccgcgcag gccgttggta ttatcgaacc
     2041 agttgcgccg caaatggatc aggtcacgat acagctgcgt tatgccggca aagcgtgtgg
     2101 ctttcgacca atcgagaaac acgccatccg accaggcgcc ccactccaaa aactcctggc
     2161 ccataaagat catcggaatg ccgggcgcgg taaacaccag cgccgccgcg agcgttgaac
     2221 gtttctgggc aaagaaactg tcggcacg
//
LOCUS       DATAVD010000684         2366 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1554047, whole genome shotgun sequence.
ACCESSION   DATAVD010000684 DATAVD010000000
VERSION     DATAVD010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1554047"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            146..1543
                     /locus_tag="VHX39_12940"
     CDS             146..1543
                     /locus_tag="VHX39_12940"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX3992070.1"
                     /translation="MTDDDLVWFGAVELGRHIRAGEITSARATEACLDRIASFNPRLE
                     ALVTVTEERARAEAAAADSEIAAGRWRGPLHGVPYCLKDIIQTAGVRTTAGSFILADW
                     VPNTDATVQSRLAAAGAVLLGKANTHEFAFGATTQNSHGRTRNPHDTGRIPGGSSGGS
                     GAAVAAGLAAFSIGSDTAGSIRLPSAYCGIAGLKPTWGLISAAGIVAQSFSADHIGPM
                     ARSVEDLAAIMAVIAGPDPADPTCLNTPPPDFVAIGPAKLDGVRVGIPVELLAISVQP
                     AVHAGFMRALAALKDLGAQVLEVSVPLLARATGINNAIVPPETMAQHQLWQAGWFQGR
                     EIRYGDDVSKLLAMGAGVSGTATILAQRDRIELGCQLDQVFADSADVLLTPAQPMTAI
                     PLDDPGMDLDAMIHFLCPFSLTGVPALALPSGADERGLPVSVQIVGPRLHDPRVLTIG
                     RALEAALGPGRRPNL"
     gene            2092..2286
                     /locus_tag="VHX39_12945"
     CDS             2092..2286
                     /locus_tag="VHX39_12945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992071.1"
                     /translation="MVEVTAIEFAFMLRQVGLAITEAQASELRDGYGLIRAMAELVRG
                     PRDREAEPAHLFVVEGHRGR"
BASE COUNT          432 a          748 c          745 g          441 t
ORIGIN      
        1 gctgcccgct ggcgaccgaa cattgcgcac acatcgtacc aaaactcgac gccaaacgcc
       61 ctgggcgccg gctcgcctgc ctgaacgtgc cgagcgaaat gctgtaacct gccgatcgtg
      121 tatcggaaca tgaggagagt ggcggatgac cgatgacgac ctggtgtggt tcggtgcagt
      181 cgagttgggc cgtcatattc gcgccggcga gattacgtcc gcgcgtgcga ccgaagcgtg
      241 tctcgaccgg atcgcgtcgt tcaacccgcg tctggaagct ctcgtcacag tcaccgaaga
      301 acgtgcgcgg gccgaggccg cggcagccga ttcagagatc gccgccgggc gctggcgtgg
      361 tccattgcac ggcgttccct actgcctgaa ggatattata cagaccgcgg gggtccgcac
      421 gaccgccggt tcgttcatcc tggccgattg ggtgcccaac acggacgcaa cggtgcagtc
      481 gcggctggcc gcggcgggcg cggtgctgct aggcaaggcc aacacgcatg aattcgcctt
      541 cggcgccacc acacagaaca gccatggccg gacccgcaat ccacatgaca ccggccgcat
      601 accgggcggc tcgtccggcg gttcgggtgc cgcggtggcc gccgggctcg ccgccttttc
      661 gatcggcagc gacacagcgg gatcaatccg acttccgtcc gcctattgcg gcatcgccgg
      721 cctgaaaccc acctgggggt tgatcagcgc ggcgggcatc gtcgcgcaat cgttcagcgc
      781 cgaccatatt ggtcccatgg cgcgttcagt cgaggatctg gcggctatca tggcggtgat
      841 cgcgggtccc gatccggccg atccgacctg tctcaatacg cccccaccgg attttgtggc
      901 gatcggccct gccaaattgg atggcgtgcg ggtcggcatc cctgtggaac tgctggccat
      961 ctcggtgcaa ccagcagttc acgctggatt catgcgcgcg ctcgccgcgc tcaaggatct
     1021 gggcgcccag gtcctagagg tctcagtgcc gctgctcgcg cgggccaccg ggatcaacaa
     1081 cgcaatcgtc ccgccggaga cgatggccca gcatcagcta tggcaggcag gctggttcca
     1141 gggccgggag atccgctacg gcgacgatgt ctcgaaattg ctggccatgg gcgccggagt
     1201 gtccggaacg gccaccattc tggcacagcg cgatcggatc gagctcggat gccaactcga
     1261 ccaggttttt gcggattcgg cggacgtgct gctgacgccg gcccagccga tgacagcgat
     1321 cccgctggac gaccccggga tggatcttga tgccatgatc cacttcctct gcccgttcag
     1381 cctgaccggc gtgccggcgc tggcgctgcc gtccggcgcc gacgaacgcg gcttgccggt
     1441 gagcgtgcaa attgtcggcc ctcgcttgca tgatccgcgc gtgctcacga taggtcgtgc
     1501 tctggaagcg gctttagggc ccggtcgccg accaaatctg tgacggcaaa cgctgacaga
     1561 ggctgctcgc cgagttcgcg gcgcccgatc ttcctcgtcc ttttatagcg ctcaagttga
     1621 cgatgccacc cggcatctgg tcgtccagac tttggcactt aggcgaatac atcggcgatc
     1681 tgcgttacct tgggactggg gcagaagagc gacgcagcag gcctcgccgc gacagcaacc
     1741 ggtctcattg attattattc gggcttctct tagatcactc agaggtatat gcacatataa
     1801 taggccatta ttagatagta tggccaatta tttatctctg gatccaaagt tcagtttgac
     1861 gaaacgggga attgtcgctt ggatttggcc cgtggcgatc agtgggacat gcgacgccgc
     1921 cacgtagggc cggccgagac ggacaagttt atgtcgctcg acgtcgcccc acgaagctca
     1981 ctctgtcctg gcgtgctcct cgactgccgt cgcgttggcg gcaccgagca acacgcccca
     2041 cctgaaagtt ctgttccgct gaagcacgaa cacttgcggg gaaaattcga gatggttgag
     2101 gtaacggcga tcgaatttgc attcatgctg cggcaggtcg ggctggcgat cacggaagcg
     2161 caggccagtg agcttcgcga cggctacggc ttaatccgag cgatggccga gctggtccgc
     2221 ggaccacgag accgagaggc ggaaccggca catctcttcg tcgtcgaggg gcatcgcggt
     2281 cgatgagcaa cggattcccg acaatcgctg aggcagcccg ccaaatcgcc accaggcaac
     2341 tatcctcgca cgagcagacc caactc
//
LOCUS       DATAVD010000685         1882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1180199, whole genome shotgun sequence.
ACCESSION   DATAVD010000685 DATAVD010000000
VERSION     DATAVD010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1180199"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1509
                     /locus_tag="VHX39_12950"
     CDS             <1..1509
                     /locus_tag="VHX39_12950"
                     /inference="COORDINATES: protein motif:HMM:NF024795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hint domain-containing protein"
                     /protein_id="HEX3992072.1"
                     /translation="VVNSGGVQQVGGSTTWNYYYNQPSGAPISTNLSGGVASGTTVSN
                     GGTEIVASGGLTISTTVISSGTVNVSSGGTATGTTISSGGVLVISSGGSATDTILQIG
                     GTIDVAYVPYVSGATATLNSSTDVLTVTDGGNTLTYQMADSYTGDTFLVSNDSNNNTQ
                     ITLTPCFCAGTRILTDRGEVPVEQLAVSDRVMTADGMPRPVKWVGHRSLDLSRHPHPD
                     LVRPVLIRTGAIAEGMPHRDLYVSPDHALLLDDVLIPARLLVNGASIRSERECRTVVY
                     YHVELNAHDILLAENLPAESYLDTGNRVMFENTGMPMLLHPDLANDQSRRVAQSCRPF
                     ADAPAVVEPIWHRLAQRSVDLGLALPAAPQTTDDPALHVVIGGRTIRPLSQQGGRYVF
                     MLPATEAPMQLVSLATRPSSLRPWVEDRRRLGVMVSGLTLKRGADVDVIPLDHPLLSR
                     GWWDVEGDHSALWRWTDGNAMIPALIGGPVLLEVTLAHTLDYPPSCSNRHHA"
     gene            1567..>1882
                     /locus_tag="VHX39_12955"
     CDS             1567..>1882
                     /locus_tag="VHX39_12955"
                     /inference="COORDINATES: protein motif:HMM:NF024170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX3992073.1"
                     /translation="MAQHLLLSAAARSLSPGKVMRMSERGAENVFVRLRWPQTDGKPV
                     CPHCGCQICYDCRRSEHQPRWRCKACRADFSATSGTLFAWHKLPLRTYLTAIAVFCNE
                     VKG"
BASE COUNT          320 a          630 c          580 g          352 t
ORIGIN      
        1 gtcgtcaaca gcggcggcgt gcagcaggtc ggcggttcga ccacctggaa ctattattac
       61 aaccagccct ccggcgcgcc tatttcgacc aatctcagcg gcggcgtagc ctccggcacc
      121 acggtgtcca acggcggcac cgagatcgtt gcgtccggcg gtctcacgat cagcacgaca
      181 gtcatctcca gtggcactgt caacgtctcc tccggcggca ccgccaccgg aacgacgatc
      241 agcagcggcg gtgtgctggt catatcgtcc ggcggttcgg cgaccgacac gatcctgcag
      301 attggcggta ccatcgacgt ggcgtatgtg ccctatgtca gcggcgccac cgcgacatta
      361 aattcgtcaa ccgacgtact gaccgtcacc gacggaggca acacgctcac ttatcaaatg
      421 gcggacagct ataccggcga caccttcctc gtttccaacg actcgaataa caacacgcag
      481 atcacgctga ccccctgctt ctgcgccggt acgcgcattc tcaccgatcg cggcgaagtg
      541 ccggtggagc aattggccgt cagtgatcgc gtgatgacgg cggacgggat gccgcggccg
      601 gtcaagtggg ttggtcatcg cagcctcgac ctgtcccgcc atccccatcc cgacctggtg
      661 cggccggtgc tgatccgaac cggcgccatt gctgagggca tgccgcaccg cgatctgtat
      721 gtctccccgg accatgctct gttgctcgac gacgtgctga tcccggcacg gttgctggtc
      781 aacggcgcca gtatccgctc cgaacgcgaa tgccggacgg ttgtctatta ccatgtcgaa
      841 ctgaatgccc acgacatcct gttggcggaa aacctgccgg cggaaagtta tctcgacacc
      901 ggcaaccgag tgatgttcga aaacaccggg atgccgatgc tgctgcatcc cgatctcgcc
      961 aacgaccaaa gccggcgcgt cgcccagtcc tgccggccgt tcgccgatgc gcctgccgtg
     1021 gtggaaccga tctggcatcg gctcgcacag cggtccgtcg atctggggct ggcgctgccg
     1081 gcggccccgc agaccaccga cgacccggca ctacacgtcg tcattggcgg acggacgatc
     1141 cggccgctca gccagcaggg tgggcgctat gtgttcatgc tgcccgcgac cgaggcgccg
     1201 atgcagcttg tttcgctggc gaccaggccg agcagcctgc ggccctgggt cgaggaccgt
     1261 cgccgcctcg gggtcatggt gtccgggttg acgcttaaac ggggtgccga tgtcgatgtg
     1321 atcccactgg atcatcccct gctgtcgcgt ggctggtggg acgtcgaggg cgaccactcc
     1381 gcgctgtggc gctggaccga tggaaacgcc atgattccgg cgttgatcgg aggcccggtt
     1441 ctgctcgaag tcacgctggc ccacacgctg gactatccgc catcatgtag caaccgccac
     1501 cacgcttgac gggctatgcg atgtcggtca tgttcctttt atgttctgtg gatcgacacg
     1561 gccctgatgg cgcaacactt gctcttgtcc gcggctgccc gttcgctcag cccgggcaag
     1621 gtcatgcgga tgtctgagcg aggcgcggag aacgtgttcg tgcgcctgcg ctggccgcag
     1681 accgacggca aacccgtctg cccccattgt ggctgccaaa tttgctacga ctgtcgtcgc
     1741 tcggaacacc agccgcgctg gcgctgcaag gcgtgtcgcg ccgatttctc ggcgacgtcg
     1801 ggcaccctgt tcgcctggca caagctgccg ctcaggacct acctgacggc catcgcggtc
     1861 ttctgcaacg aggtgaaggg ca
//
LOCUS       DATAVD010000686         2392 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3414674, whole genome shotgun sequence.
ACCESSION   DATAVD010000686 DATAVD010000000
VERSION     DATAVD010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3414674"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..245)
                     /locus_tag="VHX39_12960"
     CDS             complement(<1..245)
                     /locus_tag="VHX39_12960"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX3992074.1"
                     /translation="MWTARAAVLRQVGAPMTIETLQVGPLAAGDVLVRIRAASLCHTD
                     LEAIEGALAVQLPAVLGHEAAGEVAEVGSEVTELAAG"
     gene            complement(259..939)
                     /locus_tag="VHX39_12965"
     CDS             complement(259..939)
                     /locus_tag="VHX39_12965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003620704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3992075.1"
                     /translation="MSDPLVLRDVHRTYSTEAGDLRVLRGIDLILRAGEIVALVAPSG
                     VGKSTLLHIAGLLDRPTSGNVLVEGKDAGNLPDNARTAVRRDTIGFVYQFHHLLTEFT
                     ALENVALPQMIAGRGRREANRRATDLLGVFGLGDRVQHLPGKLSGGEQQRVAIARALA
                     NQPRILLADEPTGNLDVATAESVFAELTARVRDTGVAALIATHNPDLAARMDRTVKIV
                     DGKLVAVG"
     gene            complement(932..2185)
                     /locus_tag="VHX39_12970"
     CDS             complement(932..2185)
                     /locus_tag="VHX39_12970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006116574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HEX3992076.1"
                     /translation="MFGSFERAVAGRYLRARKGERFVSIIAIFSLIGIALGVATLIVV
                     TSVMSGFQTEIVSRFLGVNGDVTIAAFAGQKIDNYAELTKRIQALHGVQSVVPFVDGQ
                     VLLSTSTNASSGGLVRGISQPDLKSLHRISDHILAGSLNDFTGDNALAIGVGFAEGYR
                     VNIGDLVTLISPEGAATAFGTIPRVRAYKVVAIFDAGLNEYNNSVVFLPLPAAQIYFQ
                     KPNAVTQIEIRMDDPDQVDALASQLTPLVSGLPVQVRDWRHANDLIIGVLQVQKDTMF
                     IVLGMIVLVAAFNVVSSLIMLVKDKRADIAVLRTIGASSGAVQRIFIMCGAFVGIAGT
                     ALGAGLGIVICRNIVAIQRVIEEITGRQVVDFSMFMLSALPNTIDWPDVFRVVALGLA
                     LSILATLYPSWRAARTDPVEALRHE"
     gene            complement(2194..>2392)
                     /locus_tag="VHX39_12975"
     CDS             complement(2194..>2392)
                     /locus_tag="VHX39_12975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011251680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HEX3992077.1"
                     /translation="DLMGHPWQLVVGPRGATAGKVELKRRVVGMSGGEREELSPEDAL
                     DRIFANSDRPHSDRPHSDWKA"
BASE COUNT          494 a          800 c          696 g          402 t
ORIGIN      
        1 tcgccagccg ccagttcggt cacctccgag ccaacctctg caacttcgcc agccgcttca
       61 tggcccagta ccgcggggag ttgcacggcc aacgcgccct cgatcgcttc cagatcggta
      121 tgacacaagc tcgccgcacg gatgcgcacc agcacatcgc cggccgccaa cggtcccacc
      181 tgcaacgttt cgatggtcat cggcgcgccc acctgacgca ggacggcggc acgagcggtc
      241 cacatgaccc gtccctcctc aaccaaccgc tacaagtttg ccgtcaacga ttttcacggt
      301 gcgatccatc cttgccgcaa ggtcgggatt atgcgttgcg atcagcgccg ccaccccggt
      361 gtcccgcacc cgcgcagtca actcggcaaa cacggactct gccgtcgcca cgtcaagatt
      421 gcccgtcggt tcatcggcca gcaatatcct cggctgattg gccagagcgc gagcaatcgc
      481 cacgcgttgc tgctcgccac cggacagctt gccgggcaaa tgctgcaccc ggtcgcccaa
      541 tccaaagacg cccagtagat cggtggcgcg gcggttggct tcgcggcggc cacggccggc
      601 aatcatttgc ggcaacgcga cgttttccag cgcggtgaac tcggtcagca gatggtggaa
      661 ctggtaaacg aagccaatgg tgtcgcggcg caccgcggtt cgcgcattgt ccggcaggtt
      721 gcctgcatcc ttgccctcga ccagcacgtt gccgctggtt ggccggtcca gcaatccggc
      781 gatgtgcaga agggttgatt tgccgacgcc cgacggcgcc accaaagcga caatttcgcc
      841 agcccgcaag atcaggtcga tgccgcgcag cacccgtagg tcgcccgcct cggtactgta
      901 tgtccggtgc acatcacgca gcacgagtgg gtcactcatg ccgcagcgct tccaccggat
      961 cggtccgcgc cgcccgccaa ctgggataca aggtcgccaa tatcgacagc gccagaccga
     1021 gggcgacaac ccggaaaacg tccggccagt cgatcgtgtt cggcagcgcg ctcaacatga
     1081 acatcgagaa gtcgactacc tggcggccgg taatctcctc gatcacgcgc tgtattgcga
     1141 cgatgttgcg gcagatcacg atgccgaggc cggcgccaag cgcagtgccg gcaatgccga
     1201 caaaggcgcc gcacatgatg aagatacgct gcactgcgcc gctgctggca ccgatcgtgc
     1261 gcaacacggc aatgtcggca cgcttgtcct tcaccagcat gatcagagag gacaccacat
     1321 tgaacgccgc caccagcacg atcatgccaa gcacgatgaa catggtatcc ttctgcacct
     1381 gcaacacgcc gatgatcaga tcgttggcgt gccgccagtc gcgcacctgc acaggcaatc
     1441 cggaaaccaa cggcgtcaac tgcgacgcca gcgcgtcgac ctgatccgga tcgtccatac
     1501 ggatttcgat ctgggtgacc gcgttcggct tctgaaaata aatctgtgcg gccggcagag
     1561 gcagaaacac cactgaatta ttgtactcgt tcagaccggc atcgaagatc gcgacaacct
     1621 tataggcccg tacccgaggg atcgtgccga acgcggttgc cgccccttcg ggcgaaatca
     1681 gcgtgacgag atcgccgatg ttgacccggt atccctcggc gaacccgaca ccgatcgcca
     1741 gcgcattgtc gcccgtaaag tcattcaggc tgccggccag gatatgatcg ctgatccggt
     1801 gcagcgactt caggtccggc tgactgatcc cgcgcacgag gccgccggag gaagcattgg
     1861 tcgaggtact cagcaaaacc tggccatcga cgaacggcac caccgactgc accccatgca
     1921 aggcctggat gcgtttcgtc agctcggcat aattgtcgat tttctggccg gcgaaggcag
     1981 caatcgtgac atcgccgttg acgccgagga agcgggagac gatttcggtc tgaaacccac
     2041 tcatgacgga agtgacaacg atcagcgtgg ccacgccaag cgcgatacca atcagcgaaa
     2101 aaatggcgat gatcgaaaca aaccgctcgc ctttgcgggc acgcaggtag cggccggcga
     2161 ccgcgcgttc gaatgaaccg aacatgggag cgatcaggcc ttccagtccg aatggggccg
     2221 gtccgaatgg ggccggtccg aattggcaaa aatccggtcc agggcgtcct cggggctcag
     2281 ttcctcccgt tcgccaccgg acattccaac cacccggcgt ttcagttcga ccttgcctgc
     2341 ggtggcgccg cgcgggccga ccacgagttg ccagggatgc cccatcagat cg
//
LOCUS       DATAVD010000687         2575 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2669728, whole genome shotgun sequence.
ACCESSION   DATAVD010000687 DATAVD010000000
VERSION     DATAVD010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2575
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2669728"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="VHX39_12980"
     CDS             complement(<1..304)
                     /locus_tag="VHX39_12980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HEX3992078.1"
                     /translation="MSASLTTSLDNAANPLDMMEQIVAANEWEFDRRSDSEMAAQAPG
                     HWCDYGLFFNWSHEISVMHFTCAFDLKVPEKQRAVLYELLALANEKLWLGHFGLEGD"
     gene            complement(532..843)
                     /locus_tag="VHX39_12985"
     CDS             complement(532..843)
                     /locus_tag="VHX39_12985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007398824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HEX3992079.1"
                     /translation="MSDRPKFFDDIAGVAGGAISALAGLREEAEAMVRARTDDLIQRL
                     DLVRREELEAIQELAANARAGQEAAEAKLAAVEIRLTAIEARLAALESPDPDAIPPAD
                     V"
     gene            910..1890
                     /gene="rfaD"
                     /locus_tag="VHX39_12990"
     CDS             910..1890
                     /gene="rfaD"
                     /locus_tag="VHX39_12990"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019087898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HEX3992080.1"
                     /translation="MILITGGAGFIGSNLQATLARRGRETVVVDTLGSDGKWRNLAKH
                     PPTRIVHPDDLEAFLERRPAVEMVFHLGAVSETTAVDGDHTWATNVELSRRLWEWCAD
                     RDVRMVYASSAATYGDGAKGFDDDFSLAALESLRPLNLYGWTKHAFDLLVARTLLTRR
                     ERPPQWAGLKFFNVYGPNEYHKGKMISVVKVKHDEVAAGGPARLFKSDQPGLPDGAQA
                     RDFIWVGDVVDVMLWLMETPSVSGLFNLGTGRARTYLDLAHAVSDAAGKPRQVEFIDM
                     PASLRGQYQSFTQAPMDRLRKAGYAGQFTPLEEGVRRYVQSHLSGTDPFV"
     gene            1887..>2575
                     /gene="lgt"
                     /locus_tag="VHX39_12995"
     CDS             1887..>2575
                     /gene="lgt"
                     /locus_tag="VHX39_12995"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEX3992081.1"
                     /translation="MTHVLLFPQFDPVIVQIGPLSIRWYALAYITALVVGWRLVRRFV
                     RLAPVVATPLQVDDFLTWATLGVVLGGRLGYVLFYQPSVYFAHPALILAVWEGGMSFH
                     GGMLGVAIAIIVFCRRNAIPLFGFADRIAIVAPIGLGLGRCANFINGELWGRPAPLWW
                     PGAMVFPYATPAAHPSMATYDALKQTVCSGLLPAQCVPRYPSELYEALLEGVILFAVM
                     FVLSRREGLRER"
BASE COUNT          398 a          780 c          902 g          495 t
ORIGIN      
        1 cgtcaccttc caggccgaaa tgtcccagcc aaagcttttc gttcgccaga gcgagcaact
       61 cgtagagcac ggcccgctgt ttttccggca ccttcaggtc gaaggcgcag gtgaagtgca
      121 tgacgctgat ttcatgcgac cagttgaaga acaggccgta atcgcaccag tgccccgggg
      181 cctgggcggc catttcggag tcactgcggc ggtcgaattc ccattcattc gcggcgacga
      241 tctgctccat catatcgagg ggattggcgg cgttgtccaa cgacgtggtc agcgatgctg
      301 acatgcgggg tctcccgtta gagaggaagg ccgagcgtgg ccttcacccc caggacagtg
      361 tcgaagccgg aacgcttgcc cggtggttcg gagtcgcccg gagttggcca ccggtcgagc
      421 ctatccacgt gttcgcacgc gccgcaagtg ggataagccg tttttcggga aacggattgt
      481 gtcttttttt ccacaaatta gttacatccg ggtgaacgcg ggggctgggg atcacacgtc
      541 ggcaggtgga atggcgtcag gatcgggtga ttccagcgcg gccagacggg cctcgatcgc
      601 ggtcaggcgg atttccaccg cggcgagctt ggcctcggcg gcttcctgcc cggcgcgggc
      661 gttcgcggcg agttcctgga tcgcctccag ttcttcccgc cgcaccaggt cgaggcgctg
      721 gatcaggtcg tcggtgcggg cgcgcaccat ggcctcggct tcttctcgaa ggccggccag
      781 ggcggagatc gcgccgccgg ccaccccggc gatgtcatca aaaaattttg gccgatcgct
      841 catggcttgg gtactcctgg ttcgaaggcg gcttccgcgc ccgacgttcg gcacgtatat
      901 atcgcgccca tgatcctgat aactggcggc gccggcttca tcggctccaa cctgcaagcg
      961 acgctggcgc ggcgcgggcg ggaaaccgtg gtcgtcgaca ccctgggcag cgacggcaaa
     1021 tggcgcaacc tggcaaagca tccgccgacg cgcatcgttc accccgacga cctggaagcg
     1081 ttcctcgaac gacgccccgc ggtggagatg gtgttccacc tgggggccgt cagcgagacg
     1141 acggcggtag acggcgatca cacctgggcg accaatgtcg aactcagccg gcggttgtgg
     1201 gaatggtgcg cggatcgcga cgtgcggatg gtctatgcgt cctcggcggc gacgtacggg
     1261 gatggggcaa aggggttcga cgatgatttc tcgctggccg cgctcgagag cttgcggccg
     1321 ctgaacctgt acggctggac caagcacgcc ttcgacctgc tggtggcgcg aacgctgctg
     1381 acccggcggg agcggccgcc gcaatgggcg gggctgaagt tcttcaacgt ctacgggccg
     1441 aacgagtatc acaagggcaa gatgatctcc gtggtgaagg tcaagcacga cgaggtcgcg
     1501 gccggcggtc cggccaggtt gttcaagtcc gatcagccgg ggctgccgga cggggcgcag
     1561 gcgcgcgact tcatctgggt gggcgacgtg gtcgacgtga tgctgtggct gatggaaacc
     1621 ccgtcggtca gcgggctgtt caatctgggg accggacgcg cccggactta tctggacctg
     1681 gcgcatgcgg tgtcggatgc ggccggcaag cctcgccagg tggagttcat cgacatgccg
     1741 gccagtttgc gcgggcagta ccagtcgttc acccaggcgc cgatggaccg gctgcgcaag
     1801 gcgggctacg ccgggcagtt caccccgctg gaagaaggtg tccggcgcta cgtgcagagc
     1861 cacctgtccg ggaccgatcc tttcgtatga ctcacgttct gctgtttccc cagttcgacc
     1921 cggtcatcgt ccagatcggg ccgttgagca tacgatggta cgcgttggcc tacataaccg
     1981 cgctggtcgt gggctggcgg ctggtgcggc gatttgtgcg gctggcgccg gtcgtcgcca
     2041 cgccgttgca ggtagatgat ttcctgacct gggcgacgct tggcgtcgtg ctgggcgggc
     2101 ggctgggtta tgtgctgttc taccagccgt cggtctactt cgcccatccg gcgttgatcc
     2161 tggccgtgtg ggaaggcggc atgagcttcc atggcggcat gctgggggtc gccatcgcga
     2221 tcatcgtgtt ctgccgccgc aacgcgatcc cgctgttcgg cttcgccgac cggatcgcga
     2281 tcgtggcgcc gatcgggctg gggcttggcc gctgcgcgaa tttcatcaac ggtgagctct
     2341 ggggccgacc ggcaccgttg tggtggcccg gcgcgatggt gttcccctat gcaacgccgg
     2401 cggcgcatcc ctcgatggcg acgtatgacg cgctgaagca gacagtgtgc tccgggctgc
     2461 tgccggcgca atgcgtgccg cgctatccca gtgagttgta tgaggcgctg ctggaaggcg
     2521 tcatcctgtt cgccgtgatg ttcgtgctgt cccggcggga gggtctgcgg gaacg
//
LOCUS       DATAVD010000688         3798 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_622938, whole genome shotgun sequence.
ACCESSION   DATAVD010000688 DATAVD010000000
VERSION     DATAVD010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3798
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_622938"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..866)
                     /locus_tag="VHX39_13000"
     CDS             complement(<1..866)
                     /locus_tag="VHX39_13000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992082.1"
                     /translation="MSLVRLQLLLLALLAVARPSLGAAPDDGGALQSWMLAQIQAGKD
                     VDFNESCGTGKLDPHSTDDPRWSANCRSVDPDILRALLVRPGLADAAPHGVRLRGARV
                     DGTLNLDDVHVTAVEFTLIDSSLAGDLILTTARLDGGLIIDNTVISGRLNAGTARIDR
                     GIFIRNKTLIAGELGLDGTVIGDFLTLEDATLKAGMSATAVQISGGGFGLINTELDGD
                     AMLVGARVHGLMGISGTKFKAGKQLNLTEAKIDGPVSIVNSEFGGDVNLPFTTVSEAF
                     TLVGVTIAPGKQL"
     gene            complement(1083..1586)
                     /locus_tag="VHX39_13005"
     CDS             complement(1083..1586)
                     /locus_tag="VHX39_13005"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HEX3992083.1"
                     /translation="MTNYKLMLAVAGLVGLTASQTMAAMSATDHTFAQKAAAGGLAEV
                     ALGQLAQQNGSAEQVKDFGRRMVADHSAANDELQKIAQSENITLPTTPASKDQALEKR
                     LSGLKGSAFDAAYTQDMVRDHREDIAEFQREAQSGQDPALKAFAQKTLPILQQHLQMA
                     QAVTAQK"
     gene            complement(1620..2372)
                     /locus_tag="VHX39_13010"
     CDS             complement(1620..2372)
                     /locus_tag="VHX39_13010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese catalase family protein"
                     /protein_id="HEX3992084.1"
                     /translation="MFLHRKELMQPVKVGKPDARFGTFLLEQFGGATGELTAALQYWV
                     QSFHVEDAGIRDMLQDIAIEEFSHLEMVGQLIAQHTSKIDQTGVYDAPLFRIRGVGPH
                     LLDSQGNTWTASYINEGGNVVRDLRADIASEAGARQTYEALIKACDDDGTKKVLGHLL
                     TREITHANMFMKALDSMDKLTDPMFGGIKPDESVKLVFNLSQGEDLRGPWNQSPDFNY
                     IEDPEPQGGMPPAPMNADDEGHANGKARARSR"
     gene            2545..3396
                     /locus_tag="VHX39_13015"
     CDS             2545..3396
                     /locus_tag="VHX39_13015"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3992085.1"
                     /translation="MGKLTGKVAIVTGASRGIGQMISELFASEGAKVVCAARTMNEGE
                     HRMLEGSLARTVANIKAAGGEATACTADVSTEPDCIALVEAARHAYGTVDILVNNAAL
                     NYYLPTETYPTSRWMRCFAVNVHGPFMLSKEVLKDMIPKRSGAIVNISSGSAIGPGRG
                     PYENKTVQGGVMYGATKAALERFTQGLAQEVAQYEGISVTAVSPSRVVPTPGTIHFRL
                     VTGVDDPKGEPPILMARAALLLASEPALKINGRVTYSQQILKEFGWIEDGRGRGVDTP
                     GSGYSQI"
     gene            complement(3417..>3798)
                     /locus_tag="VHX39_13020"
     CDS             complement(3417..>3798)
                     /locus_tag="VHX39_13020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992086.1"
                     /translation="VKSDLSREIGLLRTDLEREIGLVRGELRSEIGLLRNDLEREIGL
                     VRGELKSEIGLLRSEMKSEIGLVRSDLTRDMTAMDTRLSTAILKLGSNIEILRRDMTI
                     SLGAVGIASTGIIIAAMRFMLAHP"
BASE COUNT          727 a         1198 c         1094 g          779 t
ORIGIN      
        1 agttgtttgc caggggcaat cgttacgcca accagcgtga aagcctcaga taccgttgta
       61 aaggggaggt ttacatcgcc accgaattcg gaattcacga tgctgacggg accatcgatc
      121 ttcgcttcgg tgaggttcaa ctgctttccc gctttgaact tcgtgccgga gatccccatt
      181 agtccgtgca cgcgcgcgcc tacaagcatt gcgtcgccat ccaactcggt attgatcagg
      241 ccaaaaccgc ctccgctgat ttgtactgcc gtagcgctca tgcccgcttt cagggttgcg
      301 tcctccagtg tcaggaaatc tccgatcacg gtgccatcca gtcccagttc tcccgcaatc
      361 aacgtcttgt ttcttataaa gatgccccga tcgatacgtg cagtcccggc gttcaggcga
      421 cccgagataa ccgtattgtc gattatcaat ccgccatcga gacgagcagt cgtgaggatc
      481 agatcacccg cgagcgaact gtcgatcaag gtgaactcga cggcagtgac gtgaacgtca
      541 tcaagattca gcgtgccatc gaccctcgcg ccgcgcagac gcacgccatg cggtgccgca
      601 tctgccagtc ctggacgcac aagcagcgcc ctcagtatgt cggggtcgac cgagcggcag
      661 tttgcggacc aacgaggatc gtccgtcgaa tgtggatcca gtttgccggt gccgcaactt
      721 tcgttgaaat cgacatcctt cccggcctga atctgagcca gcatccagct ctgcagtgca
      781 cctccgtcat ccggtgctgc gcccagggac ggtctcgcga cggcaagcaa agcgagcagc
      841 agcaattgca gtcgcaccag ggacattgac cgctccggga ttaccatgaa cccagagcat
      901 gactttagta caccatcggc acgttgccca gaagcgagcc tcctcgccac cgggcacgat
      961 gtgcctgaaa gtcgccctgc cgcaggtcgg caagcgccat gccgaagcga acgggcggcg
     1021 cgtatttcgt gccgcccgct cgtttcggtc aattgatccc ccaggcgggg gtaaagacct
     1081 ggctattttt gcgcagtcac cgcttgcgcc atttgcaaat gctgctgcaa aatcggcagc
     1141 gtcttttgcg caaacgcctt gagggcggga tcctgacccg actgcgcctc acgctggaac
     1201 tcggcgatgt cttccctgtg atcgcgcacc atatcctgcg tataggcagc gtcgaacgcc
     1261 gatcccttca ggccgctcaa ccgtttctcc agcgcctggt ctttgctcgc cggcgtcgtc
     1321 ggcaaggtaa tgttttcgga ttgcgcgatt ttctgcagct catcattcgc agcgctgtga
     1381 tccgcaacca tgcgtcggcc aaagtccttg acctgttccg cagagccgtt ctgttgggcc
     1441 agctgcccca aagctacctc agccaaccca ccggcggcgg ccttttgtgc aaaagtgtga
     1501 tcggtggctg acattgccgc catcgtctgg ctggccgtga ggccaaccag accggcaacc
     1561 gccagcataa gtttatagtt tgtcatcaat cgggctcctc tccggcggcg taacggcatt
     1621 cagcgtgatc gggcacgggc tttcccgttg gcgtggcctt cgtcgtcggc attcatcggt
     1681 gccggcggca tgcccccctg cggctcggga tcctcgatgt aattaaagtc gggcgactga
     1741 ttccacggcc cgcgcaaatc ctcgccctgc gacaaattga ataccaattt gaccgactcg
     1801 tcaggcttga tcccgccaaa catcggatcg gtcaacttgt ccatcgagtc gagcgccttc
     1861 atgaacatgt tggcgtgggt aatctcccgg gtcagcagat gtccaagcac tttcttggtg
     1921 ccgtcatcgt cgcacgcctt gatcagcgcc tcataggtct ggcgagcgcc ggcctccgag
     1981 gcgatgtcgg cacgcagatc gcgcacgacg ttgccgcctt cattgatata gctcgcggtc
     2041 caggtgttgc cctgactgtc cagcagatgc gggccgacgc cccgaatccg gaacagcggc
     2101 gcatcataaa ccccggtctg atcgatcttg ctggtgtgct gagcgatcaa ttgcccaacc
     2161 atctcaaggt ggctgaattc ctcaatcgcg atatcctgca gcatgtcgcg gatgccggcg
     2221 tcctcgacgt ggaatgattg cacccagtat tgcagtgcgg ccgtcagttc gccggtggcg
     2281 ccgccgaatt gctcaagcag aaacgtgcca aaccgcgcat cgggtttgcc gaccttgacg
     2341 ggttgcatga gttccttgcg atgtaagaac atgtcacctc cttatccgat gcgattgtct
     2401 cgggtgtctc cggtcaacgc ctcgggtcgc gactggttgc gcggggtgcg gatgtatctt
     2461 cgttcatgcc cgatcggttt cgtgccttgc actgggcttg cgcgcgccgg acaatgcatc
     2521 cggaccaacc aaaggaaacg caccatgggc aagctcaccg gcaaggttgc gatcgtcacc
     2581 ggtgccagcc gcggcatcgg ccagatgatc tccgaactgt tcgccagcga aggcgccaaa
     2641 gtggtctgcg ccgcccgcac catgaatgag ggcgagcacc gcatgctgga aggctcgctg
     2701 gcgcgcaccg ttgccaacat caaagccgca ggcggcgagg ccaccgcctg caccgccgac
     2761 gtctccaccg aacccgattg catcgcgctg gtcgaggccg cccgccatgc ctatggcacc
     2821 gtcgatatcc tggtgaacaa cgcggcattg aattattatt taccgactga aacgtatccg
     2881 accagccgtt ggatgcgttg tttcgcggtc aacgtgcatg gcccgttcat gttgtccaag
     2941 gaagtgctga aggacatgat cccgaaacgc tcgggcgcga tcgtcaacat cagttccggc
     3001 tctgccatag gcccaggccg aggcccttac gagaacaaaa cggtgcaagg tggcgtgatg
     3061 tacggtgcca cgaaggcggc gctggagcgg ttcacgcaag gcctcgcgca ggaagtcgcg
     3121 caatatgagg ggatcagcgt gaccgcggta tcgccgtccc gggtcgtgcc gactcccgga
     3181 acgatccact tcaggctggt caccggcgtc gatgatccga aaggcgagcc gccgatcctg
     3241 atggcgcgtg ccgctttgct gctggccagc gagccggcgc tgaagatcaa cgggcgggtg
     3301 acctacagcc agcaaatcct caaggaattc ggctggatcg aagacggccg ggggcgaggg
     3361 gtggacacac ccggctcggg ttattcgcag atctgaaccg ggacctctga cgcgaactac
     3421 gggtgcgcca gcatgaagcg catcgctgcg atgatgatgc cggtgctggc gatccctacc
     3481 gcccccagac tgatcgtcat gtcccgccgc aggatttcga tgttgctgcc cagtttgagg
     3541 atcgcggtcg acagccgcgt atccattgcc gtcatgtccc gcgtgagatc gctccgaacg
     3601 aggccaatct cgcttttcat ctcgctgcgc aggagaccga tctcgctttt cagttcgcca
     3661 cggacaaggc caatttcccg ttccaggtcg ttccgcagga gaccgatctc gcttctcaat
     3721 tcgccgcgga cgaggccaat ctcgcgttcc agatcggtac ggagcagccc gatctcccgc
     3781 gagagatctg acttcacc
//
LOCUS       DATAVD010000689         3770 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_65904, whole genome shotgun sequence.
ACCESSION   DATAVD010000689 DATAVD010000000
VERSION     DATAVD010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3770
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65904"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..263
                     /locus_tag="VHX39_13025"
     CDS             <1..263
                     /locus_tag="VHX39_13025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EmrA/EmrK family multidrug efflux transporter
                     periplasmic adaptor subunit"
                     /protein_id="HEX3992087.1"
                     /translation="SGNWIKIVQRLPVRIGLDPRELDRNPLRVGLSVTVTVDTRDHSG
                     PPVARAAPAVPFQSETNQDAGPQVEAQIARIVADNRGSGVRS"
     gene            260..1795
                     /locus_tag="VHX39_13030"
     CDS             260..1795
                     /locus_tag="VHX39_13030"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX3992088.1"
                     /translation="MTAAGTKPLGGAALWVTAIALALGTFMQVLDSAIANVSLPTIAG
                     NLGASTDDATWVITAFAAANGVTVPLTGWLMGRFGVVRTFIASVALFTITSFLCGVAT
                     SLPMLVFFRLLQGGFSGPMIPGSQALLIAIFPAGKRATALGIWSVTALVGPIAGPVLG
                     GYISDNYYWGLIFLINVPVGLFSGFVAWRALSSHDTPTERLPIDTVGVILLATWVGAL
                     QVVLDLGKNDDWFNSKIIVFLSVIAAIAFATWLIWELTDAHPAVDLSLLRNRNFFLGT
                     AAFCLGYALFFATNLILPVWLQQQLAYTATWAGLVSAPSGVVAVVLTPFLARFGAKRD
                     ARWLATLSFAAFGISYFMRAGYTTYSDFTHFMLPLLVQGVAMSAFFMAMLTISLEGVA
                     PERVPSATGISNFARITGASFAASIFTTAWDRRESLHQSRLSDVSSPFSQVFELGTRG
                     LRGMLSDHQAAGVVTQQMVGQAYLLSSIELFWICGWLSFAMIGLVWLARRPAAHNGPI
                     AAD"
     gene            complement(1841..3703)
                     /locus_tag="VHX39_13035"
     CDS             complement(1841..3703)
                     /locus_tag="VHX39_13035"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3992089.1"
                     /translation="MYLIRGGGASRQIFVSYRLESAGLLELFQGVRKRGDEYRRNARP
                     GEADILSVFHHAAGDYRRDVQAIDQRMAEIDSGYRQSLGEGLWRMDQLQLQLQVDGIL
                     RLPDIRYVELREATDQASPLMVTAGVRQASPSTRREFKIFYTNRGAVQLLGFLTVQAS
                     YEQIYRRLVDTAAFILAGRAVETFMVSFFILFIVHQLLTRDLTAMATALRKYDVRGSH
                     APFQLKRRPPRRPDELDDLVGAFNQMSAKLQDAYSDLQLQVGLLQHLPVSAWTLSPDG
                     TPDFVNQVWLEFSGQTSDFVRSHPEAWMIAIHPEDREAAVKIFWEGVQSGQGFAFETR
                     SLRAQDGAYRWHLQQAVVLRGSEGQVLKFVGTTTDIDDQKRAQEALRLAQGDLARINR
                     VTTMGELAASLAHEINQPIGGAVINASVCLRKLGHDQPDLDEVRVAASRMLRDTQRAA
                     EIVRRIHSQFEKSAPNRELVDVNEIIRETLTLLRGEAARYNISTRTELAADLLHIIGD
                     RVQLQQVVMNLIVNGIEAMSNVDGKRELAITSRQGENGQILVSFCDTGAGFAPELAQQ
                     IFDPFYTTKPHGTGMGLRISRSIIESHGGRMLAEGAAERGAAFHLNLPAAGPGR"
BASE COUNT          639 a         1234 c         1130 g          767 t
ORIGIN      
        1 cgtcgggcaa ctggatcaag atcgtccagc ggctgccggt gcggatcggc ctggatccgc
       61 gggagctgga ccgcaacccc ctgcgcgtcg gactgtcggt cacggtcacg gtcgatacgc
      121 gcgaccattc cggcccgccc gtcgcccgcg ccgcgcctgc cgttccattc caatccgaga
      181 cgaaccagga tgccggtccg caagtcgaag ctcagatcgc caggatcgtc gccgataatc
      241 gtggttctgg cgtccgctca tgacggcggc cggcaccaag cccctgggcg gcgcagcact
      301 ctgggttacg gccatcgcgc tggcgctggg taccttcatg caggtgctgg acagcgcgat
      361 cgccaatgtc tccctgccca ccatcgccgg aaatctgggc gccagcaccg acgacgccac
      421 ctgggtgatc accgccttcg ccgctgccaa cggcgtgacg gttccgctga ccggctggct
      481 gatgggacgc ttcggtgtgg tgcgcacctt catcgcctcc gttgccctgt tcaccatcac
      541 ttcgttcctg tgcggcgtgg ccacgagcct gccgatgctt gtgttcttcc ggctgctgca
      601 gggcgggttc tcgggaccga tgatcccggg cagccaggcg ctgctgatcg ccatcttccc
      661 tgcaggcaag cgcgccacgg cgctgggcat ctggtcggtc accgccctgg ttggtccgat
      721 cgcggggccg gtcctcggcg gctatatttc cgacaactat tactggggtc tgatcttcct
      781 gatcaatgtc ccggtgggcc tgttcagcgg ttttgtcgcc tggcgcgcgc tttcgagcca
      841 cgataccccg accgaaagac tgccgatcga cacggtcggg gtgatcctgc tcgccacctg
      901 ggtcggcgcc ctgcaggtcg tgctcgatct cggcaagaac gacgattggt tcaactccaa
      961 gatcatcgtc ttcctgtcgg tgattgccgc tatcgccttc gccacctggc tgatctggga
     1021 gctgaccgat gcccaccccg ccgttgacct cagcctgctg cgaaaccgga acttctttct
     1081 cggaacggcc gccttttgcc tcggctacgc cctgttcttc gccaccaacc tgatcctgcc
     1141 cgtctggctt cagcagcagc tggcctatac cgcgacctgg gccgggctgg tctcagcgcc
     1201 tagcggggtg gttgcggtcg tgttgacacc cttcctcgcg cgttttggcg ccaagcgcga
     1261 tgcgcgctgg ctggcgaccc tgtcctttgc cgccttcggc atctcctatt tcatgcgcgc
     1321 aggctacacg acctacagcg acttcaccca cttcatgctg ccgttgctgg tccagggcgt
     1381 ggcgatgagc gccttcttca tggcgatgct gaccatttcc ctcgaaggtg tcgcgcccga
     1441 gcgcgtgcct tcagccacgg gcatctccaa cttcgcgcgt atcaccggcg ccagcttcgc
     1501 cgcctccatc ttcaccacgg cctgggaccg gcgggagtcg ctgcaccaga gccgtctttc
     1561 ggacgtctcc tcgcccttct cgcaggtgtt cgagctgggc acccgaggcc tgcgcgggat
     1621 gctgagtgat caccaggcgg ccggcgtggt aacgcaacag atggtcggcc aggcctatct
     1681 gctctcctcg atcgagttgt tctggatctg cggatggctc tccttcgcca tgatcggtct
     1741 ggtatggctg gccaggcgtc cggccgccca taacggcccc atcgccgcgg attagcgcca
     1801 gaactcgcga attttgatag caaccacggg ctggatccag ctatcggcct ggacccgcgg
     1861 caggcagatt taagtggaac gctgcaccgc gctcggcggc gccctcggcc aacatgcgcc
     1921 cgccatgaga ctcaatgatt gaccggctga tgcggagccc catgccggtg ccgtgaggct
     1981 tggtcgtata gaaggggtcg aatatctgtt gcgccagctc cggcgcgaac cccgcaccgg
     2041 tgtcacagaa ggacacgagt atctgtccgt tctcaccttg ccgcgacgtg atggcgagct
     2101 cccgttttcc atcaacatta ctcattgctt cgatgccgtt gacgatcagg ttcatcacga
     2161 cctgctgcaa ttgcacgcga tccccgatga tgtggagcag atcggccgcc agttctgtcc
     2221 gggtcgatat attgtatcgc gccgcctcgc cgcgcaggag ggtgagggtc tctcgaataa
     2281 tctcatttac atcgacaagt tctcgattgg gcgcgctctt ctcgaattgc gagtggattc
     2341 tgcgaacaat ctcggcggca cgttgtgtgt ctctcaacat tctgctggcc gccacgcgta
     2401 cttcatcgag atccggctga tcgtggccaa gctttcgcag acagacgctg gcattgatga
     2461 ccgcgccgcc gatgggctgg ttgatctcat gggccaggga tgccgccagc tcccccatgg
     2521 tcgtcacccg gttgatgcgc gccagatcgc cttgcgccag gcgcaaagcc tcttgcgcac
     2581 gcttctggtc gtcgatgtcg gtcgtcgtgc cgacgaattt gaggacttgt ccttcggaac
     2641 cgcgcaagac cacggcttgt tggaggtgcc agcgatatgc cccgtcctgc gcgcgaaggg
     2701 atcgggtttc aaatgcaaaa ccctgccccg attgcacgcc ctcccaaaag attttcactg
     2761 cggcctcccg atcctcggga tggatcgcaa tcatccaggc ctcggggtgc gaacggacga
     2821 agtcagaggt ctggccagag aattcaagcc aaacttgatt cacgaaatcc ggtgtgccat
     2881 cggggctcag cgtccaggcg gaaacaggaa gatgctgcag cagcccgacc tgcagctgca
     2941 gatcgctata ggcatcctgc agcttcgcag acatctggtt gaacgcgccg accagatcgt
     3001 ccagttcatc cgggcgccgg ggcgggcggc gcttgagctg aaacggtgcg tgcgaaccgc
     3061 gaacgtcgta tttcctgagg gccgttgcca ttgcggtgag gtcacgcgtc agcaactggt
     3121 gaacgatgaa gaggatgaaa aaggagacca tgaaggtctc taccgcccgg ccggccagga
     3181 tgaacgccgc cgtatcgaca agcctgcgat agatctgctc gtagctggcc tggaccgtca
     3241 gaaatcccag caactgcacg gcgccacggt ttgtgtagaa aatcttgaat tcgcgccgcg
     3301 tggacgggct ggcctggcgg acgccggcgg ttaccatcag ggggctggcc tgatcggtcg
     3361 cctcacgcaa ttcgacataa cggatatcgg gcaggcgcag aatcccatcg acctgcaatt
     3421 gcagctgaag ctggtccatg cgccagagcc cttcgcccag gctttgccgg tagccgctgt
     3481 cgatctcagc catccgctga tcgatcgcct gaacgtcacg gcgatagtcg cccgcagcgt
     3541 gatggaaaac ggacaatata tctgcttcac cagggcgcgc gtttcgccga tattcgtcgc
     3601 cgcgttttcg cacaccttga aacaattcaa gcagaccggc gctttccagg cgatacgaca
     3661 caaatatctg ccgtgacgct ccaccaccgc ggatcagata cacggatgct cagggtcatc
     3721 ggcaagtcgc gcgcacggcg aacgccggcg ctgcatcaca cgacgtgctt
//
LOCUS       DATAVD010000690         1859 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2110691, whole genome shotgun sequence.
ACCESSION   DATAVD010000690 DATAVD010000000
VERSION     DATAVD010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2110691"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..888
                     /locus_tag="VHX39_13040"
     CDS             <1..888
                     /locus_tag="VHX39_13040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992090.1"
                     /translation="VFTWLSARETLDIALGRGVAAHSGNAIEASDWFAQFNSYLLALP
                     DVAGWTMLAGAIAYIILIAARFWSTSAERRLAILMLAWFGCRFLFISVTGHFEPRYAM
                     ELAVPCTILTLLLLSRLIRQPLQSWFALACGLIVFSVSVNTHDVDRMSGYDKVAEYIL
                     QHSRQDDVIWFQGNESKNLVFSLRSHSPNPKVYVLRAEKFLADYHFVREWGVADRGWT
                     SDALQSMVDRYGISMVALQPDFWADLPSMRRMQNYIESDRFKQVAEFPITADEPSQRT
                     MIRIFVNQRPGIAAEHPTR"
     gene            1059..1820
                     /locus_tag="VHX39_13045"
     CDS             1059..1820
                     /locus_tag="VHX39_13045"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HEX3992091.1"
                     /translation="MGVVAIIAIVLLILSVRMAQEYQRAVIFRLGRLKGHRGPGLYFL
                     IPFIERRVTVDLRTITQQLDTQETLSSDGVAVKVNAVLWYRAADPERTVVSVANWRNA
                     VQQAAETGMRDTIGQSELDGLLRDRLSVNARLLEVLRTTVQRWGVEIEAVELKDLDIP
                     EQMQRAIAREAEAIREKRARIIKAEGEMAAAQQLAEAATIIGAHPAALEIRRLQTISE
                     VGAEHNSTTVLMIPTEFLAAASAYARSQSAQNSPL"
BASE COUNT          343 a          574 c          558 g          384 t
ORIGIN      
        1 gtcttcacct ggctgtctgc ccgagaaacg ctcgatattg ccttgggccg gggggtcgcc
       61 gcgcactccg gcaatgcgat cgaggccagc gattggttcg cgcagttcaa ttcctatttg
      121 ctggcgttgc ctgatgttgc cggctggaca atgcttgccg gagcaatcgc ctacatcatt
      181 ctcatcgctg cccgcttctg gtccacctcg gcggaacggc gcctggcaat actgatgctg
      241 gcatggtttg gttgccgttt tttatttatt tccgtaaccg ggcatttcga gccgcgttac
      301 gcaatggagc ttgcagttcc ctgcaccatc ctcactctgc tgctgctgtc gcggctgatc
      361 cgccaaccgc tccagtcctg gtttgcgttg gcctgtgggc tgatcgtgtt cagtgtttcc
      421 gtcaacacac atgacgttga ccggatgtcc ggctatgaca aggttgccga atatatcctg
      481 caacacagcc gtcaggacga cgtgatctgg ttccagggca atgaatcgaa aaacctggta
      541 ttttccctgc gcagccattc gccaaatccg aaagtctatg tgttgcgcgc cgagaaattc
      601 ctggcggact accattttgt cagggaatgg ggcgtcgcgg atcgcggttg gacctcggac
      661 gcgttgcagt ccatggttga ccgttacggc atctcgatgg tcgcgctgca gcccgatttc
      721 tgggcggatt tgccatccat gcgccgcatg cagaattaca tcgagtcaga tcggttcaaa
      781 caggtcgcgg aattcccgat tacggccgac gagcccagtc aacgcacgat gattcggatc
      841 tttgtcaatc aacggccggg aatcgcagcc gaacatccga cgcgctgata agatacgatg
      901 ctggcctcgg tttcgcagca cgcaagcgcg aaacgctgca atggccggtg tgctggagca
      961 gttggcagac tgcttctgct gtgcctttca ctggcccgct gacgatgcca gtgtccgtcc
     1021 cgggacatgt cagggaagga atcgccgcca tgggcgggtt gggcgtcgtc gcgatcatcg
     1081 ccatcgttct gctgatcctg tccgtgcgca tggcacagga gtatcagcgt gccgtcatct
     1141 tccgcctcgg ccgcctcaaa ggccaccgcg ggccgggact ttactttctc attccgttca
     1201 tcgagcgccg ggtcacggtc gatctgcgca ccatcacgca acagctcgac acccaggaga
     1261 cgctcagcag cgacggcgtg gcggtcaagg tcaacgccgt gctgtggtat cgcgccgccg
     1321 acccggaacg caccgtcgtc tcggtcgcga actggcgcaa cgccgtgcaa caggccgccg
     1381 agaccgggat gcgcgacacc atcggacaga gtgaactcga tgggctgctg cgtgaccgcc
     1441 tctcggtcaa cgcacgcctg ctggaggtgt tgcgcaccac cgttcagcgc tggggcgtgg
     1501 agatcgaggc ggtcgagttg aaagacctcg acatccccga acagatgcaa cgcgccatcg
     1561 cgcgcgaggc cgaagcgatc cgggaaaagc gtgcccgcat catcaaggcg gaaggcgaaa
     1621 tggcggcagc gcaacagctg gccgaggccg cgacaatcat cggcgcccac cccgccgccc
     1681 tggaaatccg ccggttacag acgatctccg aggtcggggc ggagcataac agcaccacgg
     1741 tgctgatgat cccaactgaa ttcctggccg cagcgtcggc ctatgcgcgc tcgcagtcag
     1801 cacagaattc gccgttgtga ggttgcgatc cgctcgcgcg ccccatattg atgtttcct
//
LOCUS       DATAVD010000691         3862 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_812816, whole genome shotgun sequence.
ACCESSION   DATAVD010000691 DATAVD010000000
VERSION     DATAVD010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3862
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_812816"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..189)
                     /locus_tag="VHX39_13050"
     CDS             complement(<1..189)
                     /locus_tag="VHX39_13050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992092.1"
                     /translation="MRISGAEAQPGARAPNVDRGALIAAQGTGGAPACAQCHAFNGGS
                     DGSGAFPRIAGQSAHYLAG"
     gene            complement(249..2018)
                     /locus_tag="VHX39_13055"
     CDS             complement(249..2018)
                     /locus_tag="VHX39_13055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX3992093.1"
                     /translation="MVERLKPVDVVTIGVGLTGTIMAKELASVGLTVVGLERGAIRET
                     VPDFQSPAIHDELRFAVRKAMMQDNVKEAVTFRNSSDQTALPVRRWESFLPGTGLGGS
                     AVHWNGQTFRFQVADFVYKSHIEQRYGKKILDPELTIQDWGVTYDELEPYYDRFEYLC
                     GTSGKAGNIKGQIQPGGNPHEAPRAREYPTPPMKEPYFGALFRKGAEALGYHPYPQPS
                     SNLSQPYTNPEGLKLQQCVFCGFCERFACEHFAKASPQTIILPVLLANPNYELRAQCQ
                     VLRINLDSTRKKATGVTYADASGREFEQPADLVLITAFPLNNVRMLLLSGIGKPYDPR
                     TGEGVVGRSYSYQTVGGPTVFMDEGININPFMASGANGTMIDDFSGDNFDHGGLGFIG
                     GQYVGAIMTGGRPIEFHPTPPGTPKWGLGWKQAVAKHYNHTIAIQQHGTSTASRLNYL
                     SLDPTYKDAWGQPLLRMTFDFPENDTRMSQYIADKVVEIGRAMGGKTVVRGGTKRPYT
                     TTVYQSTHNCGGAVMGDDPTTSVVNRYMQCWDVPNVFSVGGSCFPQNGTYNLTGTVGA
                     LTYWALDAIKSQYLKSPGPLVHV"
     gene            complement(2035..2751)
                     /locus_tag="VHX39_13060"
     CDS             complement(2035..2751)
                     /locus_tag="VHX39_13060"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HEX3992094.1"
                     /translation="MAELSRRAMFKAVGAVGAAILPTAGTAATPAVATPRTYLFLNSI
                     EAAFIEAAVARLIPADEQWPGAIEAGVPNYIDKQLGGAWGAGERLYRSGPWQPGTPSQ
                     GYQLPFVPAELFRTAIDAIDKDLAQAGTPFAQMTADQQDAWLHGLEAGGKDLGGVPSE
                     VFFAHLWECTVEGFFSDPVYGGNRDMIAWRMIGFPGAYASYYGLVDKHGIKLDRPPMS
                     LAEDSHGHMHMDPEIPAHLP"
     gene            complement(3151..>3862)
                     /locus_tag="VHX39_13065"
     CDS             complement(3151..>3862)
                     /locus_tag="VHX39_13065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992095.1"
                     /translation="DEDDTVEPVATHGPPIPTAGVNVLGAKTIGADEAGAGTTEGLRP
                     DPMTSGMGLDIGLTGIGLRPALPVSKEPNGIPTGEAPPGDGVDIADDDAVPVVGLVPQ
                     FAVLPGSGIPIAIPPPSKVVPETDSPEDEVACTGHATPPVPPGEPAGSGLRPGDGSSV
                     VPMAFPVGGTVVAPVMPGGEVAPIPETASATCASTGPQPNPIARIDAISARRIVAGTE
                     MKRRSLLNRDAGFNASGS"
BASE COUNT          729 a         1149 c         1165 g          819 t
ORIGIN      
        1 accggcaaga taatgggctg actggccggc gatccgaggg aacgcgccac tgccgtcgga
       61 acccccgtta aacgcatggc actgcgcaca agccggtgcc cccccggttc cctgtgcggc
      121 gatgagtgcg cctcggtcca cgttgggcgc gcgagcgccg ggctgagcct ctgcaccgga
      181 gatccgcatg gaacctatgc ctgcaattac ggcggccgtg gcgcagattg caacgaggtg
      241 acccgtgctc atacgtgcac caatggtccg ggcgatttaa gatattggct cttgattgca
      301 tccaaagccc agtacgtgag tgcgccgacg gttccggtca ggttgtaggt gccgttctgc
      361 ggaaagcagg agccgcctac gctgaatacg ttgggcacgt cccagcattg catatatcgg
      421 ttgacaacgc tggttgttgg atcgtcgccc atgaccgcgc caccgcaatt atgcgtgctt
      481 tggtagaccg tcgtcgtata aggccgtttg gttccgccgc ggaccacggt ctttccgccc
      541 atggcacggc cgatttcgac gaccttgtcg gcgatatatt gcgacatgcg ggtatcgttt
      601 tcgggaaagt cgaaagtcat gcgcagcagc ggttggcccc acgcatcctt gtaggtcgga
      661 tcgaggctca agtaattgag ccggctcgcc gtcgacgtgc catgctgctg aatggcgatg
      721 gtgtggttgt aatgcttcgc gaccgcctgc ttccagccca gaccccattt tggggtacct
      781 ggcggtgttg ggtgaaactc aatgggccgg ccaccggtca taatcgctcc gacgtactgc
      841 ccgccaatga agccaagccc tccatggtcg aaattgtcgc cactgaagtc gtcgatcatc
      901 gtcccgttgg cgcctgacgc catgaacggg ttgatgttga tgccttcgtc catgaagacg
      961 gtagggccgc cgaccgtctg atagctgtag ctgcggccga ccactccctc accggtcctg
     1021 ggatcgtacg gtttgccgat cccggacagc agcagcatgc gaacgttgtt gagtggaaaa
     1081 gccgtgatca gcaccagatc ggcgggttgt tcgaactccc gccccgaggc atccgcataa
     1141 gtgactccgg ttgccttctt acgagtgctg tccagattga tgcgcaggac ctgacactgt
     1201 gccctcaact cgtaattggg attggcgagc agaacaggaa ggatgatggt ctgcgggctg
     1261 gctttcgcaa aatgttcgca ggcgaagcgt tcgcaaaaac cgcaaaagac gcactgttga
     1321 agtttgaggc cctccggatt ggtgtatggc tgactgagat tcgacgatgg ttgcggataa
     1381 ggatgatagc cgagagcttc ggctcccttg cggaacaatg cgccgaaata cggctccttc
     1441 atcggtggcg ttggatattc tcgtgcgcgc ggcgcttcgt gcggattgcc gccaggttgg
     1501 atctggcctt tgatgtttcc cgctttgccg ctggttccgc acagatattc gaaacgatcg
     1561 tagtagggct cgagctcatc gtaggtgacg ccccagtcct ggatggtcag ttcggggtcg
     1621 aggatcttct tgccgtagcg ctgctcgata tgagatttat atacgaagtc cgcgacctgg
     1681 aaacggaaag tctgaccgtt ccaatgcacc gcagagccac caagtccggt gccaggcagg
     1741 aaactctccc agcgccggac cggaagggcc gtctgatcgg acgaattgcg aaatgtgact
     1801 gcttccttga cgttgtcctg catcatggct ttgcggacag caaaacgcag ctcgtcatgg
     1861 attgccggcg actggaagtc gggcactgtt tcccgaatcg ctccgcgctc gagaccaacc
     1921 actgtcaatc ctacggacgc cagctccttg gccatgattg tgccggtcag gccaacgcca
     1981 atcgtaacga catcgacggg cttcagacgc tccaccatct tggtctcctg gctgctaagg
     2041 cagatgtgcg ggaatttcgg gatccatatg catgtgaccg tgactgtcct cagcgaggct
     2101 catcggcggg cggtcgagct tgatgccatg cttgtctacg aggccgtaat aagaggcata
     2161 ggcacccggg aagccgatca tccgccacgc gatcatgtca cggttgccgc catagaccgg
     2221 gtcgctgaaa aagccttcca ccgtacactc ccaaagatgc gcgaaaaaca cttcactggg
     2281 cacgcccccg aggtccttgc cgccggcctc cagcccgtgg agccaggcgt cctgctggtc
     2341 ggcggtcatt tgggcgaatg gcgtaccggc ctgcgcaagg tccttatcga ttgcatcgat
     2401 cgctgttcgg aataactccg caggaacgaa aggcagttgg tatccctggc tcggagtgcc
     2461 cggttgccag ggaccactgc ggtacaggcg ttcgcccgcg ccccatgctc cgccaagctg
     2521 cttgtcgata taatttggaa cgccggcttc gattgcaccg ggccactgct cgtcggcggg
     2581 aatcaaccgt gcgaccgctg cctctataaa ggcagcctcg atgctgttga ggaacaaata
     2641 tgtgcgcggt gtcgccacgg ccggcgtcgc ggcggtgccg gctgttggca aaatcgcggc
     2701 accaaccgca cccacggctt tgaacatagc cctgcgcgac aattcagcca tgttcgcact
     2761 cccgttttga attgcccgtc ctgagtcctc tggacgaggg ttgcctcgga cagtgctgtt
     2821 tcgtgaatag gatataagcg cgatccggcg attgtatcgt tggattccgc cttagatctt
     2881 ctgagttcat ctggtctcag acgttgtcga gcgcacatgc aggactcgga aaaggtcagt
     2941 actcgtccgt tcatcctgtt cgcctcagaa catctaagga gtgctcagac ggatccaatg
     3001 gtttcgtagc gcgtcagaca acatattcga gttgcttgat gaacacgaga tatccgcaag
     3061 gagagtcaac gtgaagacga ctaccataat cgcaaacaat cggaattcga tggttccgtg
     3121 gtcccccgcg gcgtcggcgc ctcttactac tcaggagccc gaagcattga aaccggcatc
     3181 gcggtttaaa agggatcgcc gtttcatctc cgtgccggcg acaatgcggc gggcgctgat
     3241 cgcgtcgatc ctggcgatag ggttcggctg cggtcctgtg gatgcgcaag tggccgacgc
     3301 ggtttccggt ataggcgcaa cctcgccacc tggcatgacc ggcgcaacga cggtcccgcc
     3361 aaccggaaac gccatgggca cgacagaact gccgtcgccg ggcctcagtc cgcttcccgc
     3421 aggctcgcct ggcggtaccg gtggtgtggc gtgcccggtg caagcgacct catcttctgg
     3481 actgtccgtc tctggcacga cctttgacgg tgggggaatg gcgatgggaa tgccgctgcc
     3541 cggcagcacc gcgaactgcg gcaccagccc aaccaccggt actgcatcgt cgtccgcgat
     3601 gtcgacgccg tcgccgggtg gagcctcccc ggtgggaatt ccgttgggtt ccttggagac
     3661 gggcaatgcc ggcctcagcc ctatgccggt cagcccaata tccaatccca tgccgctcgt
     3721 catgggatcg ggtcttaatc cctcggtggt cccggccccg gcctcgtccg cgccgatggt
     3781 ttttgcaccc aatacattca caccggccgt gggaattggc ggaccgtgtg tggcgactgg
     3841 ctcgacggtg tcgtcttcat ct
//
LOCUS       DATAVD010000692         1627 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2111617, whole genome shotgun sequence.
ACCESSION   DATAVD010000692 DATAVD010000000
VERSION     DATAVD010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2111617"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1197)
                     /locus_tag="VHX39_13070"
     CDS             complement(<1..1197)
                     /locus_tag="VHX39_13070"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3992096.1"
                     /translation="MKPQLHFGAFLYTPGTHSAGWRHPDAVPQTDMHFPYYVEMARTA
                     ERGKLDTIFLQDTAAVGGSGGLDGNSPYRPSQGRQVHLEPVSLIAALAAVTSHIGLIS
                     TATTTYNEPYNIARRFATIDHISGGRAGWNLVTSQVEDEAGNFGLERHVDHAQRYERA
                     IEFYDVVAGLWDSWEADAFLHDKASGVWFDFDKMHFLHHRGEHFSVRGPLNVSRTPQG
                     RPVVAQAGSSDIGRELAARSADLVFTAQVTVVEGQAFCTDLRDRAERYGRGRDDIKIL
                     PGLMPIVGRTDAEAADHFDQLQELIDDSLAIRALARLTGDLDIYQFPLDGPLPDLPPS
                     NAAKARQALIVELARKDNLTIRQVARYLGTSQGHRVLHGSAKTIADSMEEWLLAGACD
                     GFNLLFP"
     gene            complement(1232..>1627)
                     /locus_tag="VHX39_13075"
     CDS             complement(1232..>1627)
                     /locus_tag="VHX39_13075"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX3992097.1"
                     /translation="SLRFRIIAGGLVRAEEYINAMRMRTDLARAMQTVMETVDVMMLP
                     TGEPAGKLEPVSPASLFTQPSFTTPFNVGGNPALSVCCGFAKNGLPFSLQIAGKLFDD
                     ATVLRFGDAYEKATPWRASRPVLAVTETA"
BASE COUNT          308 a          493 c          523 g          303 t
ORIGIN      
        1 cggaaacagc aaattgaagc catcgcaggc gccggcgagc agccattctt ccatcgaatc
       61 ggcgatggtc tttgcagagc catgcaacac gcgatgacct tgcgatgttc ctaaataccg
      121 cgcgacctga cggatggtca ggttatcctt tcgcgccagt tcgacaatca gcgcctgtcg
      181 ggctttcgcc gcattactgg gaggcaaatc cggcaacgga ccgtccagcg gaaactgata
      241 gatatcgagg tcgccggtca gcctcgccag cgcgcggatt gccaacgagt cgtcgatcaa
      301 ttcctgcaac tgatcgaaat ggtccgcggc ctcggcgtcg gtgcggccga cgatcggcat
      361 caggccgggc agaattttga tatcgtcgcg gcctcgtccg taacgttcgg ctcggtcgcg
      421 caggtcggtg caaaacgcct gaccttccac cacggtcacc tgagcggtga acaccagatc
      481 ggcactgcgg gcggcgagtt ctcgcccgat gtcggatgat ccggcctgcg ccaccaccgg
      541 ccgcccttgc ggcgtacgcg agacattcag tggtccacgc acggaaaaat gctcgccgcg
      601 gtggtgcagg aaatgcatct tgtcgaagtc gaaccaaacg cccgaggctt tgtcgtgcag
      661 gaaggcgtcg gcctcccaac tgtcccacaa gccggcaacc acgtcgtaga actcgatggc
      721 gcgttcgtaa cgttgcgcgt ggtcgacatg gcgttcgaga ccgaaattgc cggcctcgtc
      781 ttcgacctga gacgtaacga ggttccagcc ggctcgcccg ccgctgatgt gatcgatcgt
      841 ggcgaagcgg cgcgcgatat tatagggctc attgtaagtg gtggtcgcag tggaaatcag
      901 gccgatatgc gacgtcaccg ccgccagcgc cgcgatcagg ctgacgggtt ccagatgcac
      961 ctggcggcct tgcgagggcc ggtaagggct gttgccatcc agtcctccac tgccgccgac
     1021 cgctgcggta tcctggagaa agatcgtatc gagtttgccg cgttcggcgg tgcgtgccat
     1081 ttcgacatag tacggaaaat gcatgtcggt ctgtggcacg gcgtcgggat gccgccagcc
     1141 ggcactgtgg gttcccggcg tgtaaaggaa agcgccgaaa tgtagttgcg gtttcatgtc
     1201 gcctccacgg gagcgaggga ggcaaatcgc atcacgcggt ctccgtcacc gcaagcaccg
     1261 gccggctggc gcgccatggc gtggctttct cgtaggcgtc gccgaaccgt aacacggtcg
     1321 catcgtcgaa cagtttgccg gcgatctgca acgagaacgg caggccgttt ttggcgaagc
     1381 cgcaacacac tgacagcgct ggattgccgc cgacgttgaa tggcgtggtg aaggagggct
     1441 gcgtgaacaa ggacgcgggc gacactggct ccagcttccc ggcgggctcg ccggttggca
     1501 gcatcatgac atccacggtc tccatgacgg tttgcatcgc gcgggccaga tcggtacgca
     1561 tgcgcatcgc gttgatgtat tcctcggcgc gcaccaggcc gccggcgatg atgcggaagc
     1621 gcaggct
//
LOCUS       DATAVD010000693         3412 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3042092, whole genome shotgun sequence.
ACCESSION   DATAVD010000693 DATAVD010000000
VERSION     DATAVD010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3412
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3042092"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="VHX39_13080"
     CDS             <1..299
                     /locus_tag="VHX39_13080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992098.1"
                     /translation="VDTFFTRFQVLLTPGHDQKWAEVNLSSQIPGWQRFPAADDWLRR
                     NAVVAGGPDQRLIFMKFLDARAKVTGGQPLSQEQKDALFDQFRRWQTGQERQNN"
     gene            complement(379..864)
                     /locus_tag="VHX39_13085"
     CDS             complement(379..864)
                     /locus_tag="VHX39_13085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992099.1"
                     /translation="MNKKPPGLPNIEDATLRACLAPLMDAMNAGSDAANQPLAPIALP
                     PIAQLQSVGAGSNDNPLPPADQSGPRVGGTSAGMPNTLAEWRLVADDDFASFRMVELF
                     LAMTDAELATAAKDFPRQIAGTVARIGRIKQRLAGQYDKVTATIALLERARLAVGSET
                     E"
     gene            complement(861..2567)
                     /locus_tag="VHX39_13090"
     CDS             complement(861..2567)
                     /locus_tag="VHX39_13090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992100.1"
                     /translation="MTSQEDLDDVAFRALLAPLALEVLPVPSLPSIGGTADPEHPAAE
                     RGPEGQPLIPPVILAGATRSVSPILAEEGKRPRSLPGDPAAAAIAVIQRHCPPSEAGE
                     PMQLAQSASPPTAEPELPSFAVPPAHLMRSRPEIPSDGPASGPPLTVSLVPGMLAEHC
                     SFGQTTLPPDPITPGTEMLPGDWSLAGELPHLAAPTSGVLPEDWSIPLEFASELPFGL
                     PPEEQEDRPLPPTGHFASLGSGMLPTGRWRFTVAIPGHLRESQGPPDGAPTSSAPPAA
                     ELRQGRSPAATVAQGIARPNISPRLVARAGAARDAVVVPVGQTQLVIRKPALPPARVR
                     WSVVLLAGLASAFTVACMSWLFDPPSPVDVPVETGVAALSEVASAAPASSAPASSGPV
                     ATRSLTMAPAPGRTSSSSLGATSTPGPAATAMSSPVPPTAPGSPEARPAAPPVTGQAT
                     TFTEAATAAPSLATQTLNQPTTSPQAMIGLLTQRGDAAFAVGDIIAARLLYERAAAMG
                     SAAAATAVGKTYDLDFLLRADTHGIQPDSAAAAAWYRKAAALGDPEARTLLGRFETQG
                     RP"
     gene            complement(2576..>3412)
                     /locus_tag="VHX39_13095"
     CDS             complement(2576..>3412)
                     /locus_tag="VHX39_13095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEX3992101.1"
                     /translation="QATSQERKIPVVSLASTKGGVGKTTLAYVLATEVARRLAHATSG
                     GSSPLRSVSANASAPVWRGRVTCIDADPNRTLAQVLQLTKDRLITCIESDSERLLADL
                     RNAQAEADLIVIDLEGTANQAMLYAAGKSDLVLVPAQPSRFDVVEAVKTVGVVRKAAD
                     LVGRDIAHRVVLSRTPVLRQRVADHSRAQFERAELPLLPVELVQRAAFQSMTYTGQPP
                     WRQDGGEQAAANVASLVDEVLNIVGLNLPPVTRQDPQNAEGAPALRRDSWPHLQDVQT
                     VA"
BASE COUNT          616 a         1140 c         1089 g          567 t
ORIGIN      
        1 tggtcgacac gttcttcacc cggttccagg tgctactaac gcccggccat gaccagaaat
       61 gggccgaggt caacctgtcc agccaaattc cgggatggca acggttcccc gccgccgatg
      121 actggctcag gcgcaatgcc gtggtcgcag gagggcctga ccagcgactg atcttcatga
      181 agttcctgga cgcgcgggcc aaggtcaccg gcgggcagcc gttatctcag gagcaaaagg
      241 acgcgctgtt cgaccagttc cggcgctggc agaccggtca ggaacggcag aacaactgac
      301 cggtccgttc agcagataac gcagcctggc ttcggatcac gagccgcgca cacggtcagg
      361 catcatcccg caccctgttc attcagtttc cgatccgacc gccaaccggg ctcgttcgag
      421 cagtgcaatt gtcgccgtca ccttgtcgta ctgcccggcc aaacgttgct tgatgcgtcc
      481 gatcctcgcc acagtgccag cgatctgcct cggaaagtcc ttggcagcgg ttgccagttc
      541 cgcatccgtc atggcgagaa acaactcgac catgcggaac gatgcaaagt cgtcgtccgc
      601 cacgaggcgc cattccgcta gcgtattcgg catccccgcc gatgtgccgc cgacccgcgg
      661 tcctgattga tcggcgggtg gcagcggatt gtcattcgac ccggcaccca cggactgcaa
      721 ctgcgctatc ggtgggaggg caatcggcgc cagtggctgg tttgccgcat cgctacccgc
      781 gttcatcgcg tccatcagcg gtgccaggca tgcgcgcaat gtcgcgtcct cgatgttggg
      841 caacccgggt ggttttttgt tcacggccgg ccctgcgttt caaaacgacc aagcaacgta
      901 cgcgcctccg gatcgccaag tgcagcggcc ttgcgatacc aggctgcagc ggcagccgaa
      961 tcgggctgaa ttccatgcgt atcagcccgc agcaaaaagt cgaggtcgta cgtcttgccc
     1021 accgcggtgg cggcggcggc tgaacccatt gcagcggcac gctcgtaaag caggcgggcc
     1081 gcaatgatgt cgcctacggc gaacgccgca tcaccgcgtt gcgttagcag cccaatcatc
     1141 gcctgaggtg atgtcgtggg ttggttaagc gtctgcgttg ccaacgatgg cgcggcggta
     1201 gccgcctcgg tgaatgtcgt ggcctggcct gtcacgggtg gcgccgctgg ccttgcctcc
     1261 ggcgagcccg gcgcggtcgg gggcaccggc gaggacatcg ctgttgctgc cgggcctggt
     1321 gtcgatgttg cgcccaacga cgacgacgat gttcggccgg gcgctggcgc cattgtgagg
     1381 cttcgcgttg ccaccggccc agaggacgcc ggcgcagagg acgccggcgc agcggacgcc
     1441 acctccgaga gtgcggcaac acccgtctcc acgggcacgt cgaccggcga tggcggatca
     1501 aatagccatg acatgcaggc cacggtgaac gccgacgcca gtccggcaag caggacgaca
     1561 ctccagcgaa cccgtgcggg aggcagcgcc ggtttccgta tgaccaattg cgtctggcca
     1621 actggcacca ccacggcatc cctggcggct ccggcacgtg ccaccagccg ggggcttata
     1681 ttcggacgcg cgatgccctg tgccaccgtg gctgccggcg accggccctg tctcagttct
     1741 gccgcgggcg gagccgacga tgtcggtgcg ccgtccggcg ggccttgcga ctccctgagg
     1801 tgacccggaa tggcgacggt gaaccgccat cgccctgtcg gcaacatccc tgaccccagg
     1861 gaggcaaaat gacccgttgg cggcagcggg cggtcttcct gctcctcggg cggcaaaccg
     1921 aagggaagct cagacgcaaa ttcgagtggt attgaccaat cttcgggcag cacaccagac
     1981 gtcggcgcgg caaggtgagg cagctcgcct gccagggacc aatcccctgg caacatttcc
     2041 gtccccggcg tgatcggatc aggcggtaac gttgtctgtc cgaacgagca gtgttcggcc
     2101 agcattcccg gcaccaggga gaccgtgaga ggcggcccag aggcgggacc gtcggacgga
     2161 atctccggcc gagaccgcat caggtgagcc ggcggcacgg cgaacgacgg caactcaggt
     2221 tccgccgttg ggggcgatgc cgactgcgcc agttgcatcg gttcgccagc ctccgatggc
     2281 gggcagtgcc gctggatcac agcaattgcc gccgccgccg gatcacccgg caacgatcgc
     2341 gggcgcttgc cctcctccgc cagaatcggc gatacggagc gcgtggcacc ggccaaaatc
     2401 actggcggta tcagcggttg gccctcaggt cctcgctccg ccgccggatg ttccggatca
     2461 gcggttccgc cgatcgacgg cagcgacggg accggcagca cctccaacgc cagcggcgcc
     2521 agaagcgcgc ggaacgcgac gtcgtccaga tcctcctggg aggtcatgtc agcgctcatg
     2581 cgacggtttg aacgtcctga aggtggggcc aagagtcacg ccgcaacgcg ggcgcgccct
     2641 ctgcattctg cggatcctgc cgcgttaccg gaggcaaatt cagacccacg atgttcagta
     2701 cctcatcgac caggctggcg acattggcgg ctgcctgctc gccaccgtct tgccgccacg
     2761 gcggttggcc ggtgtaggtc attgactgaa aggcggcgcg ctgcaccaac tcgacgggca
     2821 gcaacggcaa ttcggcgcgc tcgaactgcg cgcgcgaatg atccgcaaca cgctggcgca
     2881 aaaccggggt gcgcgacagc acgacgcgat gggcgatgtc gcgtcccacc aggtccgccg
     2941 ccttgcggac gacacccacc gtcttgaccg cctccacaac gtcgaaccgc gagggctgcg
     3001 ccggcaccaa cacgagatcc gattttcccg ccgcatacaa catggcctga ttggcagtgc
     3061 cttcaagatc gatcacgatc aaatccgctt cggcctgagc attgcgcaaa tccgcgagca
     3121 gccgctcact gtcgctctcg atgcacgtga tcagacggtc tttggtaagc tgcaatacct
     3181 gtgccagcgt gcgatttgga tcggcgtcaa tgcaggtgac gcgaccacgc caaaccggtg
     3241 ctgaagcgtt cgccgatacg gaccggagcg gcgaagaccc gcccgatgtc gcgtgcgcga
     3301 gacgacgtgc cacttccgtc gccagaacat aagcgagcgt cgtcttgccc acgccacctt
     3361 tagtggacgc caacgacaca accggaattt ttcgttcctg cgaggtcgcc tg
//
LOCUS       DATAVD010000694         1696 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_251585, whole genome shotgun sequence.
ACCESSION   DATAVD010000694 DATAVD010000000
VERSION     DATAVD010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1696
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251585"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..848
                     /locus_tag="VHX39_13100"
     CDS             <1..848
                     /locus_tag="VHX39_13100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992102.1"
                     /translation="VVTPLRRFADTAWRRPDARRECRFVVAAPWLAPGLAIVALVLVN
                     WVGFGRISVSPYGNVFVLARVIYDGPGMMVLRRDCPDRGWRLCRYLDRFPATADEFLW
                     AKASPVMLAGGHKAISAEAGAIIREAVVAQPGSLLAATFDNTIEQLTLFASGDGLQSW
                     NEQVGSWIDQDFRTSERTAFHSGRQQSGDLAVPALLAIGHRVTALAGIAAALLLLPFA
                     WHRRHVACWFLAVALLALPLSAAITGGLSTPHDRYQSRIVWLPAAMAFLTVPALMGRR
                     RSRFE"
     gene            845..>1696
                     /locus_tag="VHX39_13105"
     CDS             845..>1696
                     /locus_tag="VHX39_13105"
                     /inference="COORDINATES: protein motif:HMM:NF014051.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEX3992103.1"
                     /translation="MSHNVFWSALEAAGAALFSVVAAFIIARLIGPTELGTGATAIAV
                     HVLLWVAVNALFADAIVQRDAIDEATMSTAAWASTAIGCGAAALQAGSGWLLAWMLHD
                     GRLVPMALLLAVPFPFVGMGGALQGLLTRQRRYRALAMRTLLGQGSGMIVGIVLASEG
                     AGAWALVAQQATGSLLAAVVLMSLARWRPRAVFRWSAVVSLLRIGLPLTASTLLQIGR
                     YRIFAILIGGTAGVAALGQIHLAFRLVDTVREIAFTALWRLLLPILSEHQHDDAALLR
                     QVDHLLRF"
BASE COUNT          227 a          535 c          575 g          359 t
ORIGIN      
        1 ccgttgtcac cccgttacga cgcttcgcag acaccgcctg gcggcgcccg gatgctcggc
       61 gtgaatgccg gtttgtcgtg gctgcaccgt ggttggcacc tggcctggcg atcgtcgcgc
      121 tggtgctggt gaactgggtc ggtttcgggc ggatttcggt ttcgccgtac ggcaacgtat
      181 tcgttctggc gcgagtcatt tatgacgggc ccggcatgat ggtgctgcgc cgcgattgtc
      241 cggatcgcgg ctggcgtctg tgccgttacc tcgaccggtt tcctgcaacc gcggacgagt
      301 tcctgtgggc caaagcgagc ccggttatgc ttgcgggcgg ccacaaggcg atctcggcag
      361 aggccggcgc gattattcgg gaagcggttg tcgcgcaacc cggcagcctg ctggctgcga
      421 cctttgataa tacgatcgag caactaactc tttttgccag tggtgacggc ctgcagagtt
      481 ggaacgagca ggtcggatcg tggatcgacc aggactttcg cacaagtgag cgcaccgcat
      541 tccactccgg acgtcagcag tccggagatc tggcggtacc ggcgttgctt gcgatcggac
      601 accgcgtcac cgcgctggcc ggtatcgccg ctgcgctgct gttgctgccg tttgcctggc
      661 accggcggca tgtcgcgtgc tggtttctgg cggttgcatt actggcattg ccgctgagtg
      721 ctgcgatcac tggcggcctt tcaacaccgc acgaccgcta tcagagccgc atcgtttggc
      781 ttcccgctgc catggccttc ctcaccgtgc cagcgctgat gggccgccgg cgaagccgtt
      841 tcgagtgagc cacaacgtct tctggtcagc attggaagcc gccggggctg cgctgttctc
      901 ggtcgtcgca gctttcatca tcgcccgcct gatcggcccg acggaactcg gaaccggagc
      961 caccgccatt gcagtccatg tgctgctttg ggtcgccgtc aatgcattgt tcgcggacgc
     1021 catcgtgcag cgcgacgcga tcgacgaggc cacgatgagc accgcagcct gggcttccac
     1081 cgcaatcgga tgcggtgcgg ccgcattgca ggcggggtcc ggatggctgc tcgcctggat
     1141 gttgcacgac gggcggctgg tgccgatggc cttgctgctc gcggtgccgt tcccgttcgt
     1201 cggcatgggc ggagcgctgc aaggcctgct gacgcgccag cggcgctacc gggcgttggc
     1261 gatgcgtacg cttttaggcc agggcagcgg catgatcgtt gggatcgtcc tggcgtcgga
     1321 gggcgccggg gcctgggcgc tggtggcgca gcaagcgacc ggatcgctgc tcgccgcagt
     1381 agtgctcatg agccttgcca ggtggcggcc acgggccgtg ttccgctggt ctgcggtggt
     1441 ctcgctgctg cgcatcggct tgccgttgac agcgagtacg ctgttgcaaa tcggccgcta
     1501 tcgcatcttc gcgatcctga tcggcgggac cgccggcgtt gccgcccttg gtcaaattca
     1561 cctcgcattc cgcctcgtgg acacggtccg ggagatcgcg ttcaccgcac tctggcgcct
     1621 gttgctgccg atcctgtccg agcaccagca cgacgatgcc gcgctgttgc gccaggtgga
     1681 ccatctgttg cgattt
//
LOCUS       DATAVD010000695         2921 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1927280, whole genome shotgun sequence.
ACCESSION   DATAVD010000695 DATAVD010000000
VERSION     DATAVD010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2921
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1927280"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..602)
                     /locus_tag="VHX39_13110"
     CDS             complement(<1..602)
                     /locus_tag="VHX39_13110"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HEX3992104.1"
                     /translation="MEQRKYYLDWLRVSAFGFLILFHVGMLYVTWPFNLKSARIVPAL
                     EPWMTALGAWRLALLFFISGVAANFLITRLGPGAFARDRLRRLLPVILFAMFVVIPPQ
                     VYVEFRSKGAIAPGYLHFWLFSYLPADQTLAHHFGRTFPTWDHLWFVVYLLAYTLVLA
                     AIFGVAQRLGRLEGRPIPLLAALLAPAAWMAVTNLFILKVA"
     gene            complement(700..1824)
                     /locus_tag="VHX39_13115"
     CDS             complement(700..1824)
                     /locus_tag="VHX39_13115"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX3992105.1"
                     /translation="MSLSLGFLVLDIATAVCAALLGARVLANRPLRTSALLIAAIMAC
                     SICDVVLGRQDYQYWIQPALHFALGSSAAVLNLARNVTTSLFMVLCFVLFAGKRTFPR
                     WLAALVAVQLALEYPLRSVLPDALTGHRFWTDVAPAALQALFACVALYWTLARWRDDL
                     SETRRRIRLLTSAVIALNLIVSDLLTRVLIGPETIANYYAHEVLIASHLAILLFVLFQ
                     LSEGNIAFLLGPMEAAAAPVRPKRLMEPETAAALVRLTKLLEEERVYRKAGLSLKALA
                     DLAGLPEYRLRRLIHEELRHQNFNAFLHQYRIAEACVRLRDPAERRVPILTIALSVGY
                     QSINTFNRGFREVMETTPSAYRAHAESAEATPGKVAPETA"
     gene            complement(1869..2666)
                     /locus_tag="VHX39_13120"
     CDS             complement(1869..2666)
                     /locus_tag="VHX39_13120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992106.1"
                     /translation="MIFKKPFLIFCGAAALLISAMSQAQAGLPLPQVDDVKFKGTAGN
                     YTATITGENFGAPPSDIPCTACSPTELQFINMNNQPHPLTANVTNWTDTAITVTGVAV
                     ASGDAVRVSVYNLVSGQVGAWGGHAGLLAAGVPRITGLTTANTGKKITVTVTGTGFGP
                     APDGVIGQNTNTPFFVMTTWNAKTPFTDGFPWNAGFCGTTDCNGVTIGYQSWSDTQIV
                     LSGFGSDYAQGNWFARAHDAFCVGVWPSTSTSGGTTGATVKCKRLHK"
BASE COUNT          564 a          889 c          977 g          491 t
ORIGIN      
        1 gcgaccttca gaatgaaaag gttcgtgacc gccatccatg ctgcgggcgc gagcagggct
       61 gccaggagcg ggattggacg gccctccaag cgccccaggc gctgtgcaac gccgaagatc
      121 gccgcgagca ccagcgtgta ggccagcaga tagacgacga accacaggtg gtcccaggtc
      181 gggaatgtcc tgccaaagtg atgggcgagc gtctggtccg ccggcaggta ggaaaacagc
      241 cagaagtgca ggtaccccgg cgcgatggcg cccttcgacc ggaactcgac atacacctgt
      301 ggcgggatga cgacgaacat tgcgaacagg ataaccggca gcaggcgccg cagccggtcg
      361 cgcgcaaacg cgccgggacc gagcctggtg atcaggaagt ttgcggcgac gcccgagatg
      421 aagaacagca gcgccagccg ccaggcgccg agcgccgtca tccagggttc cagcgccggt
      481 acgatccgag cgctcttcag gttgaagggc caggtcacgt agagcatgcc gacgtggaac
      541 aggatcaaaa agccgaacgc cgagaccctc agccagtcca gatagtattt gcgctgttcc
      601 atgcagcccc tcgtcgtgag actgctttga tggtgtcgaa ccgcggaaag tgcgcgccgc
      661 tttcgcgaac gcacttcccg ttttctgaaa tcggggcggt tatgccgttt ccggtgcgac
      721 ttttccgggc gtggcttcgg cgctctcagc atgcgccctg taggccgagg gcgtcgtctc
      781 catcacctcg cggaagccgc ggttgaaggt gttgatcgac tggtagccca cggacagcgc
      841 aatggtgagg atcggcaccc ggcgttcggc cggatcgcgc aaccggacgc acgcttcggc
      901 aatgcggtac tggtgcagga aggcgttgaa gttctggtgc cggagttctt cgtggatcag
      961 ccggcgcaat cggtattccg gcaggccggc caaatctgca agcgccttca gagagaggcc
     1021 ggccttgcgg tacacgcgct cttcctcgag cagcttggtg agccggacga gggcggctgc
     1081 cgtctccggc tccatcagcc tctttggccg gacgggcgcc gccgctgcct ccatcgggcc
     1141 gaggaggaaa gcgatattgc cctcgctcag ctggaacagg acgaacagca ggatcgcgag
     1201 atggctcgcg atcagcactt cgtgcgcgta gtagttcgcg attgtctccg ggccgatcag
     1261 gacacgggta agaaggtccg acacgatgag gtttaaggcg atgacggcgc tggtcaggag
     1321 ccgtatccgg cggcgggtct cgctgagatc gtcgcgccag cgcgccagcg tccagtagag
     1381 cgcgacacag gcgaacaacg cctgcagcgc ggcgggtgcc acatcggtcc agaaccggtg
     1441 gccggtcaac gcgtccggca gaaccgaacg gagcggatat tcaagagcca gctggacggc
     1501 cacaagcgcc gcgagccagc gcggaaacgt ccgcttgccg gcgaacagca cgaagcacag
     1561 caccatgaac aggctggtcg tgacgttgcg ggcaagattg agtaccgcgg cggacgaacc
     1621 cagcgcgaaa tgcaacgcag gctgaatcca gtactggtag tcctgtcgtc cgagcacgac
     1681 atcgcagatc gagcaggcca tgatagccgc gatcagcaac gcgctcgtgc gcagcggacg
     1741 gttcgcaaga acccgcgcgc cgagcagtgc ggcacacacc gccgtcgcga tgtcgagaac
     1801 cagaaaaccc agcgacagac tcacagcgcg tctccgttat ggcgcgcgcg agcctggcat
     1861 ggcgccatct acttgtgcag ccgtttacac ttcaccgtgg cgcccgtggt gccgccgctc
     1921 gtgctcgtgc tgggccagac gccgacgcag aacgcatcgt gcgcccgggc aaaccagttg
     1981 ccttgcgcgt agtcgctgcc gaaaccggac aaaacgatct gggtatccga ccagctctgg
     2041 tagccgatgg tgacgccgtt gcagtcggtc gtgccgcaga agccggcgtt ccacgggaag
     2101 ccgtcggtga acggcgtctt cgcattccac gtcgtcatca cgaagaatgg tgtgttggtg
     2161 ttctggccga tcacgccgtc aggcgcaggt ccgaacccgg tgccggtgac ggttacggtt
     2221 atctttttgc cggtgttcgc cgtggtcagg ccggtgatcc gcggcacgcc cgcggccaaa
     2281 agaccggcgt ggccgcccca ggcgccaacc tgtcccgaga cgagattgta gaccgacacg
     2341 cgcacggcat cgccggatgc cacggcaaca cctgtcacgg tgatcgctgt gtcggtccag
     2401 ttggtgacgt tggcggtcaa cggatgcggc tggttgttca tgttgatgaa ctgcaactcg
     2461 gttgggctgc aagcggtgca ggggatatcc gagggcggcg cgccgaagtt ctcgccggtg
     2521 atggtcgcgg tgtagttgcc ggcggtaccc ttgaatttta cgtcgtcgac ctgcggcagg
     2581 ggaaggcctg cctgtgcctg cgacatggcc gaaatcagaa gcgccgcggc gccgcaaaag
     2641 atgagaaacg gctttttgaa gatcatgcga cagctccccg ggttcggccg gcgctctccg
     2701 gcccgcgaaa gcataccggg ctttacgaga gtgtgaagag cggtcaaaac ttttgctgtg
     2761 atcgctgcga tcgcggttaa aggcgctgac ccggcgaatt gagattttta tcagtcgcca
     2821 atttttgcgc cggcatcgca ggcgatcgcg agccgcttcc cagcggctcg cgtatctcgc
     2881 cgaagcaatg tcagtgtacg tggcgcagca ccatgccggc g
//
LOCUS       DATAVD010000696         2052 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3603575, whole genome shotgun sequence.
ACCESSION   DATAVD010000696 DATAVD010000000
VERSION     DATAVD010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3603575"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            22..762
                     /locus_tag="VHX39_13125"
     CDS             22..762
                     /locus_tag="VHX39_13125"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3992107.1"
                     /translation="MLILQIGERPLRRDQDSRDLEGRGFHRETTETLEEAISFIELYD
                     FDIILADLDIRGTPGLDMIREIRTVSNIPIIGITTSIDPRMKVLALDMGADDVLTQLC
                     GVEELLARVRAVVRRRFGHVDSKLRCGRLELSLVVHEAKVDDVPLRLGPKEYLLLEFL
                     ILKRGSPVSKTACMTHLYGTDEYPEAKTIDVVLCRLRKRLAPYGLSDMIESVWGYGFK
                     LRDPSGNAALPQIPTPAIAVRRRSLATA"
     gene            762..1397
                     /locus_tag="VHX39_13130"
     CDS             762..1397
                     /locus_tag="VHX39_13130"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEX3992108.1"
                     /translation="MVLGNRTCVALLWAVMLLPTCGKAWAQADDSIACDQAARDAETE
                     FGLPAGVLKAIGAVESSHWPWSANIDGVAESYRSKAEAIAGLTLAQASHPGDIDVGCF
                     QVSLRYHPSAFPTLADAFDPVANARYAAKFLRELHDRYGDWNHAVGAYHSATGPLEAD
                     YRDRVIAQWKGAPPPKDQPADQPRWQVISIASALPPPLGPHALPHIITLGD"
     gene            complement(1378..>2052)
                     /locus_tag="VHX39_13135"
     CDS             complement(1378..>2052)
                     /locus_tag="VHX39_13135"
                     /inference="COORDINATES: protein motif:HMM:NF025052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX3992109.1"
                     /translation="ARTGDIALSGFPIFLSQRAMIRAHVLAAMKQDSAAYLAAAQTYL
                     EPVSPMVVAIGGLQGTGKSTLARALAAGLGRAPGALIVRSDEIRKRLHGAEPEARLSP
                     DAYTDAANAATNAAVIEQARLAATAGHAVIVDATFLDTTMRHDLAAAVEVPFLGIWLT
                     APLPVLESRIASRSDDASDATVAVLHRSVQSDPGAGDWLAVDASDGAQVLAVVREAIG
                     LNPRGL"
BASE COUNT          394 a          659 c          640 g          359 t
ORIGIN      
        1 aaaaccgaca ggagttgaaa catgctgatt ttgcagattg gcgagaggcc gttacgacgc
       61 gatcaggact cccgcgattt ggaagggaga ggatttcacc gtgaaacaac ggaaacgctt
      121 gaagaggcga tttcgtttat cgagctgtat gatttcgaca tcattctcgc agacttggac
      181 attcggggaa cgccgggact cgatatgatc cgggagatca gaaccgtttc caacattcca
      241 atcatcggga tcactacctc catcgaccca aggatgaagg tccttgcgct cgatatgggc
      301 gcggacgatg tgcttaccca attgtgcggc gtcgaggaac ttctggctcg ggtgcgggcg
      361 gtcgtgcgcc gtcgcttcgg ccacgtggac tcgaagctgc gctgtggacg gctggaactc
      421 agcctcgtgg tgcatgaggc caaggtagac gacgtcccgc tacggcttgg tcccaaggaa
      481 tacctcctgc tggagttcct gatcctcaag cgcggttcgc cggtcagcaa aacagcctgc
      541 atgacacatc tatatggtac ggatgagtat cccgaggcca agaccatcga cgtggtgctg
      601 tgtcgcctgc gcaagcgtct ggcaccgtac ggactgtcgg acatgatcga gagcgtttgg
      661 ggatacggct tcaaactgcg ggaccccagc ggaaacgcgg ccctgcccca gatcccgacg
      721 ccggcaatcg cggtacggcg gaggtcgctg gcaaccgcct gatggtactc gggaaccgaa
      781 cctgcgtcgc cttgctttgg gcggtcatgc tgctgccaac ctgcggaaag gcatgggcgc
      841 aggcggacga cagcatcgcc tgtgaccagg cggcacggga tgcggagacc gaattcgggt
      901 tgccggcagg cgtgctcaag gccatcggtg ccgtcgaaag cagccattgg ccatggtcgg
      961 ccaacatcga tggtgtagcc gaatcatatc ggtccaaggc cgaagcgatc gcgggtctga
     1021 ccctggccca agcatcacac ccgggcgata tcgatgtcgg ctgcttccag gtcagcctgc
     1081 gctatcatcc ctccgccttc ccgacgctgg ccgatgcgtt cgatccggtc gccaatgcac
     1141 gctacgcggc taaattcctg cgggaactgc acgatcgtta cggtgactgg aaccacgcgg
     1201 tgggggcgta tcattccgcg accggcccgc tggaggcgga ctaccgggac cgtgtgatag
     1261 cgcaatggaa gggcgccccg ccgccgaagg accaaccggc cgaccagccg cgctggcagg
     1321 tgatctcgat cgcttccgcg ctaccgcccc ctcttggtcc gcatgcgctt ccccacatca
     1381 taaccctcgg ggattgagac cgatcgcctc acgtacgacc gccagcacct gggcgccgtc
     1441 gctcgcgtcc accgccagcc agtcgcccgc gcccggatcg ctttgcaccg atcgatgcag
     1501 aaccgccacc gtcgcatcgg acgcatcatc cgatcgggat gcgatacggc tctccaggac
     1561 cggcagtggt gcggtcagcc agatacccaa gaacggaacc tcaacagcgg ccgccagatc
     1621 atgccgcatc gtcgtgtcga ggaacgtcgc atccacgatc accgcgtgcc ccgccgtggc
     1681 agccaggcgg gcctgctcga tcacggcagc gttcgtcgcg gcgttggcgg cgtcggtgta
     1741 ggcgtccggc gacagccgag cctcgggttc cgcaccatgc agacgtttgc ggatttcgtc
     1801 gctgcgcacg atcaacgccc ccggcgcacg ccctaaaccg gcagccagcg ctcgggccag
     1861 ggtcgacttg ccggtcccct gcaacccgcc gatcgcgaca accatgggcg aaacgggctc
     1921 cagatacgtc tgcgcggccg caaggtaggc ggcactgtcc tgtttcatcg ccgccagcac
     1981 atgcgcgcgg atcattgccc gttgcgacag aaagatcgga aatccagaca gggcgatatc
     2041 cccggttcgg gc
//
LOCUS       DATAVD010000697         2383 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3042276, whole genome shotgun sequence.
ACCESSION   DATAVD010000697 DATAVD010000000
VERSION     DATAVD010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2383
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3042276"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1431)
                     /locus_tag="VHX39_13140"
     CDS             complement(<1..1431)
                     /locus_tag="VHX39_13140"
                     /inference="COORDINATES: protein motif:HMM:NF012431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3992110.1"
                     /translation="MKAYEAIAQSLKAEGMTDFFGLMGDGNMWLWGALCRDKSIKAYN
                     ARHESMAVSMADGYARTTGKVGVAMVTCGPGLTQCGTSLIAAYRGRTPVVLIAGEIKP
                     GAKNKTQSMDQRRFVEASYARFHTVTSLDNMAEEIAEAFYAARVHRVPIVLNLPMDLQ
                     EDEIDWDYDYRPSTDFLPPRMETPSSEALQAVVDKLIAAERPVIIAGRGARASGAKDA
                     IVELADRVGALLATSLQGKGYFAGHPWDIGIAGAFASAPSEHLLAEADFVLGVGAELG
                     YYTTEGGLLFPSAEVARIDIKAAPEEIGVIPGLYVQGDGRKSVAAINEALAARQVRKT
                     GLRTAATKSILDAPAHRFDPPADGIDPRALAGHLGAGLPKGLLLTCGAGHFFSWIGMY
                     MPLPEGAEIQYSYNFGAVGQGIGVAIGTGAGNPGRPHVAVEGDGSLMFNLQELETIVR
                     HKMQMVLIVWNDAGYGAEVHKLVAKGF"
     gene            1570..>2383
                     /locus_tag="VHX39_13145"
     CDS             1570..>2383
                     /locus_tag="VHX39_13145"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992111.1"
                     /translation="MSDSRAEQPGRKRYIVYGLLFTMTLINYFDRTVLSIAMPILVLQ
                     FGLSPIAVGYLLSAFIWSYAPCQLPAGMVLDQWGTRKTAARCIGFWSAATALTGAATS
                     FPFVFITRLLLGIGESPTFPLAARAIREWAPVKERALAFSISGSGPAFGTAISAITIA
                     WLVSTIGWRLAFVFSGALGFLWVIVWLVVYRDPEQASWLQPAERRMILAERSPGGTSD
                     TGGMKLKELLSYQTMWGLFLVQGCVNYTQYLFLTWLPTYLVQSRGLNIMHSGL"
BASE COUNT          411 a          771 c          712 g          489 t
ORIGIN      
        1 gaagcctttc gccaccagtt tatgcacttc ggcgccatag ccggcatcgt tccagacgat
       61 cagcaccatc tgcatcttgt ggcgaacgat ggtttccagt tcttgcaggt tgaacatcag
      121 gctgccgtcg ccctcgaccg cgacgtgcgg acgaccggga ttgcctgcgc cggtgccgat
      181 cgccacgccg atcccttgtc ccacggcgcc gaagttgtac gagtattgaa tctccgcccc
      241 ttcaggcaac ggcatgtaca tgccgatcca ggagaagaag tgtcccgcgc cgcaggtcag
      301 caacaagcct ttcggcagtc cagcgccaag atgtccggcc agcgcccgcg gatcgatgcc
      361 atccgcgggc ggatcgaacc gatgcgccgg cgcatccagg atcgactttg tggcggcggt
      421 gcgcagcccg gtcttgcgga cctggcgtgc ggccagggct tcattgatcg cggcaacgga
      481 tttgcggcca tcgccctgca cgtacaaacc cggaatgacg ccgatttctt ccggcgccgc
      541 cttgatgtcg atgcgcgcga cctcggccga cggaaacagc agcccgcctt cggtggtgta
      601 gtagccaagt tccgccccga cccccaggac gaagtcggct tccgccagca gatgctccga
      661 cggtgccgag gcaaacgcgc cagcgatccc gatgtcccac ggatgtccgg cgaaataccc
      721 cttgccctgc aacgacgtcg caagcagtgc cccgacccgg tcggccagtt cgacgattgc
      781 atccttcgcg cccgacgctc tcgcaccccg cccggcgatg attaccggcc gttccgccgc
      841 gatcagtttg tcgacaaccg cctgcagcgc ctccgaactg ggtgtttcca tgcgaggcgg
      901 cagaaaatcg gtggatgggc gataatcgta gtcccagtcg atctcgtcct cctggaggtc
      961 catcggcaaa ttcagcacga tcggcacgcg atggaccctc gccgcgtaga acgcctcggc
     1021 gatttcctcg gccatgttgt ccagacttgt tacggtatga aaccgagcat agctggcttc
     1081 gacgaagcgg cgctggtcca tggactgggt cttgttctta gcacccggtt taatttcgcc
     1141 agcgatcagc acgaccgggg tgcgcccgcg ataggccgcg atcagcgatg tgccgcattg
     1201 ggtcaggcca gggccgcagg tgaccatcgc cacaccgacc ttgccggtgg tgcgggcgta
     1261 gccgtcggcc atggacaccg ccatggattc atgccgggcg ttgtaggcct tgatggattt
     1321 gtcgcggcac aaggcgcccc acagccacat gttgccgtcg cccatcaaac caaaaaaatc
     1381 agtcatgccc tcggctttga gggattgggc gatcgcttcg tatgctttca tggtggttct
     1441 tcccggtcgt tcgtgcgtgt cgtagcccat catgccgcga tggccggata cgcacaaatc
     1501 ggcgcgtcca ttgacccgtg cggatgcccg gaatagggtt ttctgaagca aaattcctag
     1561 gggaaaacaa tgtctgacag tcgcgcggaa caacccgggc gcaaacggta catcgtctac
     1621 ggtctgttgt tcacgatgac gttgatcaac tatttcgacc ggacggtgct gtccattgcc
     1681 atgccgatac tggttctgca attcgggctg tcccctatcg ctgtcgggta tctgttgtcg
     1741 gctttcatct ggtcgtacgc gccgtgccaa ttgcccgcgg gcatggttct cgatcagtgg
     1801 ggcacacgca aaacggcggc gcgctgcatc ggcttctggt cggccgcaac ggcactgact
     1861 ggcgcggcta ccagctttcc cttcgtgttc attacgcggc tgctgctggg cattggtgaa
     1921 tccccgacct tcccgttggc cgcgcgcgcc atccgcgaat gggccccggt gaaggagcgc
     1981 gccctggcgt tctcgatttc cggctccggc ccggcattcg gcaccgcgat ttcggcgatc
     2041 accatcgcct ggctcgtcag taccatcggc tggcgcctcg cctttgtctt ctccggagcg
     2101 ctcggttttc tctgggtcat cgtctggctg gtggtctacc gcgaccccga acaggcatcg
     2161 tggttgcagc cggccgaacg gcggatgatc ctggcggaac gttcaccggg aggtaccagc
     2221 gataccggcg gaatgaaact gaaggaactt ctcagctacc agaccatgtg gggcctgttc
     2281 ctggtgcagg gctgcgtgaa ctacacgcaa tacttgtttc tgacctggtt gccgacctac
     2341 ctcgtccaaa gccggggcct caacatcatg cattccggcc tgc
//
LOCUS       DATAVD010000698         2050 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2112058, whole genome shotgun sequence.
ACCESSION   DATAVD010000698 DATAVD010000000
VERSION     DATAVD010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2050
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2112058"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..895)
                     /gene="trpB"
                     /locus_tag="VHX39_13150"
     CDS             complement(<1..895)
                     /gene="trpB"
                     /locus_tag="VHX39_13150"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEX3992112.1"
                     /translation="MSTTIANSLRTGPSDRGRFGDYGGRFVAETLMPLVLEVEQAYNA
                     AKSDPAFHADLQYHLTHYVGRPSPLWFARRLTERLGGAKIYFKRDELNHTGSHKANNC
                     MGQILLARRMGRQRIIAETGAGQHGVATATMCALFGLKCVVYMGATDVERQKPNVFRM
                     KLLGAEVVSVTSGAGTLKDAMNEAMRDWVANVEDTYYLIGTVAGPHPYPMMVRDFQSV
                     IGEEAKVQLQEAEGRLPDAAVACIGGGSNAMGLFHPFLDDASVRLIGVEAGGHGIETG
                     QHAASLTGGRPGVLHGNRTYLL"
     gene            1220..>2050
                     /locus_tag="VHX39_13155"
     CDS             1220..>2050
                     /locus_tag="VHX39_13155"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3992113.1"
                     /translation="MSNILDNAEAEAARTPPVIAPLAEFELPEARRIVRTAFGTFLGV
                     PDPEAFWADRDLVYGRWRSPHVAAFGASIDGHLVGSNFATKWGSVGFFGPISVRPDLQ
                     ERGIAQSLLAATMEQFAAWGTTHNGLFTFAQSAKHVALYQKFGFHARYLTAIMTSPAR
                     PGAPVPGSSRFGALSDAEKSAALAASREVTESLYPGLDLADEIAAVDAQGLGDTILLE
                     GNGGLAAFAICHYGPRSEAGEGMCFIKFGAVRATPAAEQDYGRLLNACEALAVSVGMP
                     A"
BASE COUNT          360 a          652 c          647 g          391 t
ORIGIN      
        1 gcaacaaata cgtgcgattg ccgtgcaaca cgccaggccg tccgccggtc aggctggcgg
       61 cgtgctggcc ggtttcgatg ccatgcccgc cggcctcaac cccgatcagc cgcaccgagg
      121 catcgtccag gaatggatga aacaacccca tggcattgga gccgccgcca atacacgcaa
      181 ccgctgcgtc aggcagccgc ccctcggctt cctgcaactg gacctttgcc tcttcgccga
      241 tcaccgactg aaagtcgcgc accatcattg gatagggatg cggaccggcg acggtgccaa
      301 tcaaataata agtgtcttcg acattggcga cccagtcgcg catcgcctca ttcatcgcgt
      361 ccttcagcgt gcccgcgccg gaggtgaccg aaaccacctc agcgcccaga agcttcatgc
      421 ggaagacgtt gggtttctgc cgctcgacgt cggtcgcgcc catgtagacg acgcatttca
      481 ggccaaatag cgcgcacatc gtggcggtgg cgacgccgtg ctgaccggcg ccggtctcgg
      541 cgatgatgcg ctgcctgccc atgcggcggg ccagcaaaat ctggcccatg cagttgttgg
      601 ctttgtggga acccgtgtgg ttcagttcgt cacgcttgaa gtagatcttt gccccgccca
      661 accgctcggt cagccttcgc gcaaaccaca gcggactggg ccggccgaca tagtgcgtca
      721 ggtggtattg cagatcggca tgaaacgccg gatcggattt cgccgcgttg taagcctgtt
      781 cgacttccag gacgagcggc atcagagttt cggccacgaa gcgcccgcca taatcgccga
      841 agcggccgcg gtcggagggc ccggtgcgaa ggctgttggc gatggtcgta ctcacgcgac
      901 ggtctctcct ggggtttcgc gggattgctt agagcggatc ggcccctggc gaaagcgtgc
      961 cgtgacgctt cgagacacgc cctgtcgaaa agttggcgcg cggacttacg cagctccgcg
     1021 cgccaaaggg tttcgggtgg tgtcacgcac gaccggggta gcggtgtgcg cgtcgtgtaa
     1081 caatacgtaa cgcactgtcg ctgtcaaccc ggaattcgtt gtgactgtgc tggcggacat
     1141 gtccaccgat ttcagtttct ggtatgttcg acgtcctcaa tttgctgccc aaatcgggac
     1201 accaccggga ggggaaccca tgtcgaatat cctggacaac gccgaggctg aggccgccag
     1261 aaccccaccg gtcattgcgc ccctggcaga attcgaactg cccgaggcaa ggcgcatcgt
     1321 ccgcactgcg tttggcacgt tcctcggtgt tccggacccg gaggcattct gggctgaccg
     1381 ggatctcgtc tacggccgct ggcggtcgcc ccatgtcgct gccttcggtg cgtcgatcga
     1441 cggccacctg gtcggctcca acttcgcgac gaagtggggc agcgttggat ttttcggccc
     1501 aatttcggtg cgtcccgacc tgcaggagcg tggcattgcc caatcgttac tggccgcgac
     1561 gatggaacag ttcgcggcct ggggcacgac ccacaacggc ctgttcacct tcgcacagag
     1621 cgccaaacac gtggcgctct atcagaagtt cggcttccac gcgcggtatt tgaccgcaat
     1681 catgacgtcg ccggcacggc caggcgctcc ggttcccgga tcgtcccgtt tcggtgcgtt
     1741 gagcgatgcc gaaaaatccg ctgccctggc cgccagccgc gaggtgacgg aaagcctgta
     1801 ccccggcctc gatctggccg acgagatcgc cgcggtcgac gcccagggac tgggggacac
     1861 aattttgctg gagggcaacg gcgggctggc agcgttcgcc atttgtcatt acgggccgcg
     1921 cagtgaggcc ggcgagggca tgtgcttcat caagttcggc gccgtgcggg caactcccgc
     1981 cgcagaacag gactatggcc gtttgttgaa cgcgtgtgag gcacttgccg tttccgtagg
     2041 catgccggcg
//
LOCUS       DATAVD010000699         3466 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_624174, whole genome shotgun sequence.
ACCESSION   DATAVD010000699 DATAVD010000000
VERSION     DATAVD010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3466
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_624174"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..920)
                     /locus_tag="VHX39_13160"
     CDS             complement(3..920)
                     /locus_tag="VHX39_13160"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3992114.1"
                     /translation="MRIFICIAIVLAAAPFGLPLFAMTLLTEVLILGLLAMSLDLMVG
                     YTRLISFGHAAAYGLGAYASGYLLLHTTLSLPVAVLAASVFAGVVAIGVAWVCTLAKG
                     ISFAMLTLAFAQLLYAIAFKWTAVTGASDGLAGIPRRPGPFGITAFETKDGYYYLVLA
                     CLLGAYLFCRALVRSPFGAVLRGIRENEAKTLSLGYNTRLYKIGVVTISFALGGLAGA
                     LYSPFAGFANTDLLFWLFSGQILIMVIVGGQGTLVGPILGAAFYLLMEQVLSAYTNSW
                     ALFFGLIFIGFVMFAPEGILGLLTRRARA"
     gene            complement(922..1791)
                     /locus_tag="VHX39_13165"
     CDS             complement(922..1791)
                     /locus_tag="VHX39_13165"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3992115.1"
                     /translation="MDLFAFILVQCLNALSQAALLFFLGVGLTLIFGIMRIVNFAHGT
                     FYMLGAFLGYSAARWTGSFWAALVVAPVIAGGIGVAFEMGLLRRLYKRDDSAFLMVTF
                     GLTLVLGEIIRLLWGVDALQVATPDALSGIVFLFDEPFPVYRLFLAGAGAVIAVGIWQ
                     FLDRTRLGLLIRATSQNAEMVHALGVDVNLVRSGIFGIGCGLAALGGVLAAPLLSASL
                     GLAGNAIIDAFVIVIIGGMGSFLGSLLAAVLVAFVQVFGTYYFPDFALAAMYLLMLLV
                     LVIRPGGLLGKES"
     gene            complement(1799..2938)
                     /locus_tag="VHX39_13170"
     CDS             complement(1799..2938)
                     /locus_tag="VHX39_13170"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3992116.1"
                     /translation="MTRGAFAADSIKIGLPVALTGPLGGIGTQMKRACDFWAKQVNAK
                     GGLLGRQVELLAVDTAANPATAVRVVQEMVERSGVRVITCVVASNEALALAPKLAEWK
                     TIFISGDNGDGRLTAQSLVPNFFRPNTSGPMGTRAVALWLRDSPMKKFYGIGMDYAWG
                     HNSMDVFENEVKQLGKTFVGAVFSPTGTKDFSTYIMKIRESGADGCYLVLAGDDNIAF
                     MTQAKQYRLGDKVQLLTEQVDEMGINATGDASVGLIGGSRYVPSLDNPANKAFVAAWQ
                     AEYHRLPQMFEGDQYQSCVVMQAGIEKAGSIEDAKIRTALEGLVVSSVKGRIVMRACD
                     HQAEEQGFVVKVVRKPGMEHPVPEVIATYSPQQVTPACNKMEYTD"
     gene            complement(3081..>3466)
                     /locus_tag="VHX39_13175"
     CDS             complement(3081..>3466)
                     /locus_tag="VHX39_13175"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEX3992117.1"
                     /translation="MRHAVEVRHESFRCPAFIDLLREHDVGLVCADSADSPRLMDITS
                     DFVYCRLQGSTESQAQGYDNVALDEWRRRINIWAGGEEPADAERVGGKARPRRRDVFV
                     VFDSEKKIRAPANAMELVRRLRSPG"
BASE COUNT          712 a         1129 c         1063 g          562 t
ORIGIN      
        1 catcaggctc tcgcgcgccg ggtcagaagt cccaaaatcc cttccggcgc gaacatcacg
       61 aaaccgatga agatcaatcc gaagaacagg gcccaggagt tggtgtaggc actcagcacc
      121 tgttccatca gcaggtagaa cgcggccccc aggatgggtc cgacaagcgt gccctggccg
      181 ccgacgatta ccatgatcag gatttggccg gagaacagcc agaatagcag atcggtgttg
      241 gcgaagccgg cgaacggcga atacagggcg cccgccaagc caccgagggc gaaggaaatc
      301 gtcaccacgc cgattttgta gaggcgggtg ttgtagccga gggacagtgt ttttgcctca
      361 ttctcccgga tgccgcgcaa caccgctccg aacggcgatc gcaccaaagc gcggcagaac
      421 aggtaggcac cgagcaggca ggcgaggacg aggtagtagt agccgtcttt cgtttcgaat
      481 gcggtgatgc cgaacggtcc gggtcggcgc ggtatccccg ccaggccgtc ggacgcgccg
      541 gtcaccgcgg tccatttgaa cgcgatggcg taaagcagtt gcgcgaatgc cagcgtcagc
      601 atggcgaagg agatgccctt tgccagagtg cagacccatg ccacgccgat cgccaccacg
      661 ccggcgaaga cggatgcggc cagcaccgcg acgggcagcg acagcgtcgt atgcaacagc
      721 aggtatccgg acgcgtaggc cccgaggcca taggccgccg cgtggccgaa gctgatcaac
      781 cgcgtgtagc ccaccatcag gtcgaggctc atggccagca ggccgaggat cagcacctcg
      841 gtcagcagtg tcatggcgaa caatggcagg ccgaatggcg cagcggcgag aacgatcgcg
      901 atgcagatga agatccgcac gtcagctctc cttgcccagg aggccgccgg gacggatgac
      961 gagcaccagg agcatcagca gatacatcgc cgccagcgcg aaatcgggga agtagtaggt
     1021 gccgaagacc tgcacgaagg cgacgagcac ggctgccagc agcgagccca ggaaactgcc
     1081 catcccgccg atgatgacga tgacgaaggc gtcgatgatg gcgttgcccg ccagcccgag
     1141 ggaggctgac agcaacggcg ccgccagcac accgcccaac gccgccaggc cgcagccgat
     1201 gccgaaaatc cctgagcgca ccaggttcac gtcgacgccc agcgcgtgca ccatctccgc
     1261 gttctggctg gtcgctcgga tcagcaggcc cagtcgtgtg cggtcgagaa actgccagat
     1321 gccgacagcg atgacggcgc ccgccccggc caggaacagg cggtagaccg gaaacggttc
     1381 gtcgaacagg aacacgatgc cggacagcgc atcgggcgtg gcgacctgca gcgcatccac
     1441 gccccaaagc aggcggatga tctcacccag gacgagggtc agaccgaatg taaccatcag
     1501 gaacgcgctg tcgtcgcgtt tgtagagacg gcgcagcagc cccatttcaa acgccacgcc
     1561 gattccaccg gcgatcaccg gcgccaccac cagcgccgcc cagaagctgc cggtccagcg
     1621 tgccgccgaa taccccagga acgcccccag catgtagaac gtgccgtggg cgaaattgac
     1681 gatccgcatg atcccgaaga tcagcgtcag cccgaccccg aggaaaaaca gcagtgcggc
     1741 ctgagacaat gcgttcaggc actgaaccag tataaacgcg aacagatcca tctgcaggtc
     1801 agtcggtgta ttccatcttg ttgcacgccg gggtcacctg ctgaggcgag tacgtcgcga
     1861 tcacctcggg aaccgggtgt tccataccgg gtttcctgac caccttgacg acaaagccct
     1921 gctcctccgc ctgatggtcg caggcccgca tgacgatgcg ccccttgacg ctgctcacga
     1981 caagtccttc cagcgcggtc ctgatcttcg catcctcgat gctgccggct ttctcgatgc
     2041 cggcctgcat gacgacgcag gactgatact gatcgccctc aaacatctgc ggcagccggt
     2101 gatactcggc ctgccaggcg gcgacgaagg ccttgttcgc cggattgtcc aggctcggga
     2161 catagcgtga gccgccgatc aggccgaccg atgcatcccc ggtggcgttg atccccattt
     2221 catccacttg ttcagtcagc aactgcacct tgtcgccgag gcggtactgc ttggcctggg
     2281 tcatgaacgc gatgttgtcg tcgcccgcca ggaccaggta gcagccgtcc gcgcccgatt
     2341 cccgtatctt catgatgtat gtggagaaat ccttggttcc cgtcggcgag aagaccgccc
     2401 ccacgaaggt cttgccgagt tgcttcacct cgttttcaaa tacgtccatg gagttgtggc
     2461 cccaggcgta atccatgccg atgccgtaga atttcttcat cggcgaatcc cgcagccaca
     2521 gcgcgacggc gcgcgtgccc atcgggccgg aggtattggg ccggaagaag ttcggcacca
     2581 gcgattgcgc ggtcagccgc ccgtcgccgt tgtcgccgga gatgaagatc gttttccact
     2641 cggccagttt cggcgccagg gccaaagctt cgttggaggc gacgacacag gtgatcacgc
     2701 ggacgccgct acgctccacc atctcctgca ccacacggac ggcggtggcg ggattggcgg
     2761 cggtgtcgac ggcgagcagt tccacttgcc gacccagcag gccgcccttc gcgttcacct
     2821 gtttcgccca gaagtcgcat gcgcgcttca tctgcgtgcc gataccgccc agcgggccgg
     2881 tcagcgcgac gggcaggccg atcttgatgg agtccgcggc aaacgcaccg cgcgtcaaac
     2941 cagccgcggc ggcagtctgc agtatcattc ggcgcgatag gaacatccga gacctcccca
     3001 cgaatttttt tgtatggaga gtagggacgg atttggatcg aaggtcaatc gcggtcgtgc
     3061 gagatcatcg cgacgacgga ttatcctggc gatctcagcc ggcgaaccag ttccatcgcg
     3121 ttggccgggg cgcgtatttt cttctcacta tcgaagacca caaacacatc gcgcctacgc
     3181 ggccgcgcct ttccacccac ccgttcggcg tccgcgggct cctccccgcc ggcccagata
     3241 ttgatcctgc ggcgccattc gtcgagcgcc acgttgtcat agccctgggc ctgcgattcc
     3301 gttgagccct gcagccggca gtagacaaaa tccgaagtga tatccatcag gcgcggcgag
     3361 tctgccgaat ccgcacagac cagaccaacg tcatgctccc gcagcagatc aatgaaggcc
     3421 gggcagcgga agctctcatg ccggacttcg acggcgtgac gcatcg
//
LOCUS       DATAVD010000700         3264 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_252002, whole genome shotgun sequence.
ACCESSION   DATAVD010000700 DATAVD010000000
VERSION     DATAVD010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3264
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252002"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(60..1022)
                     /locus_tag="VHX39_13180"
     CDS             complement(60..1022)
                     /locus_tag="VHX39_13180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3992118.1"
                     /translation="MTTGLSRWESPAPIRYPDPDIVALDHRFHRLVLGNAAIERIATG
                     FRFTEGPVWVGDGRYLLFSDIPNDQILRWDETTGGISVFREPSHNTNGNTRDRRGRLV
                     SCEHDTQHLTRTEYDGTITVLAHSFEGKKLTGPNDVVVKSDGSIWFSDNGAGTRGNYL
                     GHPEPQHHPFRVYRLDPVSGQLTVAVGDMQRPNGLAFSPDESRLYVVDTPGAGDKTTW
                     VYDIVENGTKAVNGRVFFNGMPGFADGIRVDVHGNVWCGFSGGAADDGVAVFAPDGVL
                     IGRILLPERCANVCFGGRKRNRLFMAASQSIYALYVETQGAPGG"
     gene            complement(1108..2802)
                     /gene="recN"
                     /locus_tag="VHX39_13185"
     CDS             complement(1108..2802)
                     /gene="recN"
                     /locus_tag="VHX39_13185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HEX3992119.1"
                     /translation="MLTALAIRDVVLIDRLDLSFGPGLTVLTGETGAGKSILLDSLGL
                     ALGMRAESGLVRAGCGQASVAACFTLSADHPVLTLLAEQGLEAEDEIVLRRLVTKDGR
                     SRAFVNDQPAGVALLRRIGALLVEVQGQHDQMGLADPASHTTLLDLFGVAAECRDAVA
                     AAWRAWRQAVHRLEAARTAIEAARRDEEWLRHAVAELATLAPRLNEEDQLVADRQRLQ
                     QNERQAEAIAAAIAELTPRDRRGASGPAAVLRSASRLLQRLVPAHLAEQANPAREALA
                     ALERAEEALAEADTILGRLAADADADPRLLEQTEERLFALRAAARKHGVAVVELPALL
                     ESLSERLAHLESGEAQLVELDGAAKQTRDQYVTSAGGLTDVRRKAAARLRDAVMAELP
                     PLRLDKAQFFVEVIDTPETAWGAGGADQVRFLIATNPGQQPGPLAKIASGGELSRLML
                     ALKVVLSAGSTVPTLVFDEVDSGVGGATAASVGERLSRVAEVVQVLVVTHSPQVAARG
                     VAHFLVSKAAKGARTATTVEPLSKRERREEIARMLAGETVTAAARAAAADLLGAAD"
     gene            complement(2824..>3264)
                     /gene="bamD"
                     /locus_tag="VHX39_13190"
     CDS             complement(2824..>3264)
                     /gene="bamD"
                     /locus_tag="VHX39_13190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007283526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEX3992120.1"
                     /translation="KGTEQAMAALQEVVTRFPNTPFASDARLKIDLCRDHLAGKEMEI
                     GRYYQRQHLYQAAIGRFQRVVDDYQTTAHVPEALDRIIEVYLALGLVDEAKKTAAVLG
                     YNDPGSSWYQDAYNNLAAAGAVSEGLPAPSNSRGFFGRAWHALF"
BASE COUNT          631 a         1109 c          940 g          584 t
ORIGIN      
        1 attttccttg gctttggcct gcaggcgata gcgtcagcca gaagcctcgt gctgcccgtt
       61 caaccgcccg gagcaccctg agtttcgaca tacagcgcgt agatcgactg gctcgccgcc
      121 atgaacaaac gattgcgctt gcgaccaccg aaacaaacgt tggcacagcg ttccggcaat
      181 aagatgcggc cgatcaggac tccatcaggc gcgaacacgg caactccgtc atcggcggcg
      241 ccaccggaaa agccgcacca gacgttgcca tgcacgtcca cgcgaattcc gtcagcgaag
      301 cccggcatgc cgttgaagaa cacgcgtccg ttaaccgctt tcgtgccatt ctcgacgata
      361 tcgtaaaccc aggtcgtctt atcgccggca cccggcgtat cgaccacata aagccgcgat
      421 tcatcgggcg agaacgccag cccattcggc cgttgcatat cgccaacggc caccgtcaat
      481 tgccccgaga caggatccaa tcggtagacc cgaaacggat gatgttgggg ctcgggatgg
      541 cccagataat tgccgcgtgt accggcgcca ttgtcactga accagatgga gccgtcggat
      601 ttcaccacca cgtcgttcgg accggttagt ttcttgccct cgaaactgtg cgccagaaca
      661 gtaatcgttc cgtcgtattc ggtccgcgtg aggtgctgag tatcgtgctc gcagctcacc
      721 agccggcctc ggcgatcgcg cgtattgcca ttcgtgttat gagatggctc acgaaacacg
      781 ctgatgccac cggtggtttc gtcccagcgc aggatttggt cattgggaat gtcgctgaac
      841 agcagatacc gcccatcgcc gacccagacc ggtccttctg tgaaacgaaa tccggtggca
      901 atacgctcga tcgccgcatt gcccaacacc aggcggtgaa agcgatgatc cagcgccacg
      961 atgtccggat caggataacg gattggcgcc ggcgattccc agcgcgacag gccagtggtc
     1021 atgctacgtt tccttccctc gttgtggacc tgaattctgg accgtcaggt catcgagctg
     1081 gtgcagatgt caagaccgaa gataggctca gtcagccgca cccagcagat ccgcggccgc
     1141 cgcacgcgcc gctgcggtaa cggtttcgcc ggcaagcatc cgggcgattt cctcccgccg
     1201 ttcgcgcttg ctcagaggct cgacggtggt cgctgtgcgc gctcctttgg cggctttcga
     1261 taccaggaaa tgcgccaccc cacgcgccgc cacctgcgga ctgtgagtca ccaccagcac
     1321 ctgtaccacc tccgcgaccc gcgacaggcg ttcgccgacc gaggccgcag tcgcaccgcc
     1381 cacgcccgaa tcgacctcat cgaacaccag ggttggaacc gtggagccag cggacaacac
     1441 caccttcaat gccagcatca accgcgacaa ctcaccgccc gaggcaatct tcgccaatgg
     1501 accgggttgc tgtcccgggt ttgttgcaat cagaaaccgc acctgatcgg cgccgccggc
     1561 accccaggca gtttcaggcg tatcgatcac ctcgacgaaa aattgagctt tgtccaaacg
     1621 caacggtggt agctcggcca tgactgcgtc ccgcaatcga gcggcagctt tgcgccggac
     1681 atcggtcaga ccgcctgccg aggtaacgta ctggtcacgg gtttgttttg ccgcgccgtc
     1741 cagttcgacc agttgcgcct cgcctgattc cagatgtgcc aaacgctcac tcaggctttc
     1801 cagtagcgcc ggcaattcga ccacggcgac accatgtttg cgcgccgcgg cacgcagagc
     1861 gaacagccgt tcctcggttt gttccagcag tcttggatcg gcatcggcat ccgcagcgag
     1921 gcgacccaga attgtgtcag cctctgccag ggcctcctcg gcgcgttcca gcgcagccaa
     1981 cgcctcccgc gcggggttcg cctgctccgc caggtgggcc gggaccagcc gttgcagcaa
     2041 ccgcgatgcc gagcgcaaaa ccgctgccgg gcccgaagcc ccacgccggt cacgcggtgt
     2101 cagttcggcg atcgccgcgg cgatggcctc tgcctgccgc tcgttctgtt gcaggcgctg
     2161 acggtcggcg accagctggt cttcctcatt caaccgggga gccaacgttg ccagttcggc
     2221 aaccgcatgg cgcaaccatt cttcgtcacg acgcgcagcc tcgatcgcgg tacgcgccgc
     2281 ctctagccga tggactgcct gccgccatgc ccgccaggcc gctgccaccg catcgcggca
     2341 ctcggccgca acgccaaaca ggtcgagcaa tgtcgtgtga ctggcaggat cggcaagacc
     2401 catctggtcg tgctgtccct gcacttcgac gagcagggcg ccgatccgcc gcagcaaggc
     2461 gacgccggcg ggctggtcgt taacgaacgc gcgggaccgg ccatccttcg taaccagccg
     2521 gcgcaacaca atctcgtctt cggcttccag tccctgttcg gccaggagtg tcaggaccgg
     2581 atggtcagcg gacaacgtga aacacgcggc gacgctggcc tgtccgcagc ccgcccggac
     2641 caggcccgat tcggctcgca tgccaagtgc gaggccgaga ctgtccagta atatcgactt
     2701 tcctgcgccc gtctctcccg tcagcacggt caagccggga ccaaaggaca ggtccaaccg
     2761 atcgatcagc acaacatcgc ggatggcaag cgccgtcagc actgggcgac gccgatcaaa
     2821 gcatcagaac agcgcgtgcc aggcacgacc gaagaaccct cgcgagttcg aaggtgcagg
     2881 caaaccctcc gagactgcac ctgcagcggc caggttgttg taagcgtcct gataccacga
     2941 gctgccgggg tcattgtacc cgaggacagc ggctgtcttt ttcgcctcat ctaccagccc
     3001 cagcgccaga tagacttcga tgatgcgatc cagcgcctcc ggcacatgcg cggtcgtctg
     3061 gtaatcgtca accacacgct ggaagcgccc gatcgcggcc tggtaaagat gctggcgctg
     3121 ataatagcga ccgatctcca tctccttccc cgccaaatgg tcgcggcaca gatcgatctt
     3181 cagccgtgcg tcgctggcga acggagtgtt cgggaagcgg gtcacaacct cttgcagggc
     3241 tgccattgcc tgctcggtgc cctt
//
LOCUS       DATAVD010000701         2781 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2858218, whole genome shotgun sequence.
ACCESSION   DATAVD010000701 DATAVD010000000
VERSION     DATAVD010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2781
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2858218"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(131..1675)
                     /locus_tag="VHX39_13195"
     CDS             complement(131..1675)
                     /locus_tag="VHX39_13195"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEX3992121.1"
                     /translation="MAQQIMGSPSRPPENPYAGYPPADTSSLNQGFTLNYAQISGPSQ
                     PYTPVPVSNIPDIMNYLTPSQMPVSAFLASNYAVCDQWFASAPTQTYTNRSFALCAAP
                     GVAHNGKYSLIDDLQYITDSLYPIPSLLSQLDAVLGSAGEGPFWKVYFQDYSVAVATV
                     PQVAAAAASQHNVNLATFDNSDWGAAKPKQLTSTTSTFVEDLQAGSLPPFSFIEPRYF
                     DSYAPTGLPAASNHPGRGKFPGGVLGAATPIDASTGEVFLMQLYNLLQASPGWSETLL
                     IVTYDEHGGVYDHVHPPIAVPPGGNIPPANNILDKAADGFNYNVLGGRVPAIIVSPLI
                     APGTTIRAAPANVIEPPPGKAFFDHSSIIRTTWDIFGLSAGSHGLPSLTGRDLVAPSL
                     AALLTSQPSNTTGAMCGVIVAGARSLTFTHKHLLPGTPASQFILVGAGPSVALTVSVT
                     QPDGQTWLSGSFSPISSPMIDIIAVTVDISGLSENTYTGSVLIAGDASNSPLSIPVTL
                     IIEPLL"
BASE COUNT          583 a          741 c          899 g          558 t
ORIGIN      
        1 cgatatttgc ggatatcgcg caaatcacaa ccgttgaatt atcctcgctg ccgacttcag
       61 ctacaaacac cgagaggtgc gggtcacggg ccggaggtgt tcctaaaggc ggcgatactt
      121 gaatggctgt ctaaagaagc ggctcgatga tcagtgtcac cgggatactc agggggctgt
      181 tggaagcgtc accagctatc aagacagaac ccgtataggt gttttccgaa agaccgctga
      241 tgtcgaccgt cacagcgatg atgtcgatca tgggcgagct gatgggactg aatgaaccag
      301 ataaccaggt ttgtccgtct ggctgcgtca cgctcacggt taacgccaca gacggcccgg
      361 cgcccacaag tatgaactgc gatgcaggcg ttccagggag aaggtgtttg tgtgtgaatg
      421 tcagcgatcg ggcaccggcg acgatcactc cgcacatcgc cccggtcgtg tttgatggct
      481 ggctcgtgag taacgcagcg aggctcggcg ccaccaggtc tcgtccggtg agagaaggaa
      541 ggccatggct gcccgccgac aagccgaaga tatcccacgt cgtccgtatg atcgacgagt
      601 gatcgaagaa tgccttcccg ggcggcggtt cgatgacatt ggcgggcgcg gcacgaatcg
      661 tcgtaccggg ggcgatcagg ggcgaaacga tgatcgccgg aacccggcct ccgaggacgt
      721 tgtagttgaa tccgtccgca gccttgtcca gaatattgtt ggctggaggg atgtttccgc
      781 cgggaggaac cgcgatcggt ggatggacgt gatcgtaaac accgccgtgt tcatcgtacg
      841 tgacgatcag cagcgtctcg ctccaacccg gacttgcctg aaggagattg tagagctgca
      901 tcaggaagac ctctcctgta gaggcgtcga tcggcgtcgc ggctcccagg acgcctccgg
      961 gaaatttacc gcgtccgggg tgattgctgg cggcggggag gcccgtcggc gcgtagctgt
     1021 cgaaatagcg cggttcgatg aaggaaaagg gaggcaacga gcctgcctgc aagtcctcga
     1081 cgaacgtact ggtcgtcgat gtgagttgct tcggcttggc cgcaccccaa tcggagttat
     1141 cgaacgtagc aaggttcacg ttgtgctggc tcgcggctgc ggccgcaact tgcggcaccg
     1201 tcgcgacagc gaccgagtag tcctggaaat agaccttcca aaacgggcct tcgcctgccg
     1261 agccgagcac ggcgtcgagc tggctcaaga gagaaggaat tggatagagg gagtcggtga
     1321 tgtattgcag atcgtcgatc aggctgtatt tgccgttgtg ggcgacgccc ggcgccgcgc
     1381 acagcgcgaa ggaacggttg gtataagtct gggttggcgc ggatgcgaac cattggtcgc
     1441 acaccgcgta gttgctggcg aggaacgcgg acaccggcat ctgcgaaggg gtcaggtagt
     1501 tcatgatgtc cggaatgttc gaaaccggca ccggcgtata aggttggctg ggcccgctga
     1561 tttgggcgta gttgagggtg aatccctggt tcagactcga ggtgtcggcg ggaggatatc
     1621 cggcataggg attctccgga ggacgcgacg gggaacccat tatctgctgc gccatatcgg
     1681 agaagggctc gccggggtca atgagcggaa tggcggtcgg agcatacgac gggccgctgc
     1741 cgccgatctg tgtcggtgta gtctgatttg cgaccgggat cgtctggcca gagtggttcg
     1801 gatcggggtt gtctcactgc cggtcagacc gtcgagatta ctctgaccag ccggaggggt
     1861 ttgatagggg agttgattgc tcgcgttgta aagccagccc aggacattgt catacgaacg
     1921 gttctcgaac attacgacga cgacgttttt gacgggcatg cttggtctct cttcctacga
     1981 ctaatatcgt tgacatattc ccacggcgct tcgcttcgga aacgtgggcc aggtggcgcg
     2041 acgagatagc ccacacgaaa tccagtcacg actgtcggca aatactcgac gttagatcgg
     2101 aggcgggaaa cgcgaaaagg acggtgctgg atatcaatcg cgcgagacca cgtgaagtcc
     2161 ggcaccgcac cctatcgaaa tggaagcgag aatcggtagc gatattgacg cttaacgccc
     2221 gcgggggcga ttcttgacac gaattgccct tgccgctctc gtggcagatg aacgccagca
     2281 tgcatagaag ccgggaaaga gattcaccgc gccgcaatgc tggcaaatcc cactggcaac
     2341 cgtaagttgc cgtgtgccgg gtgactgcca gtaccggaac cctcgatata gcgcaaaagt
     2401 gcatgttgcc cgtacactaa gtccagcaat ggtggcgcgt cgcaggtgcg catgggctgc
     2461 ctcgcccaca gacgcgattt atcgaggagg actggcgagc acgggaatcg ctatactatg
     2521 tctgcttctg ggagcggcct ggaccttctt catggtgcca atcctcagtc tctgtgtcga
     2581 ttggtggagc gatgccctct cggcacggaa gaaatgaacg tcccgcgcgg gcggggcgtt
     2641 agtggacgga ccgcagtcga gaacgcactt ccgctaccga cactgcccct taacgcacca
     2701 cggctactga tgttctcgaa gaataccttc tcgttctaag gtcgcgcgaa tctcctcaaa
     2761 cttggcggat atgtggcctt t
//
LOCUS       DATAVD010000702         1647 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_437747, whole genome shotgun sequence.
ACCESSION   DATAVD010000702 DATAVD010000000
VERSION     DATAVD010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_437747"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(175..378)
                     /locus_tag="VHX39_13200"
     CDS             complement(175..378)
                     /locus_tag="VHX39_13200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992122.1"
                     /translation="MTKGDTFASHIRQQRRFAPTKFRVGDKRGLLSLRSQQKNWLERH
                     KEGLGDHRHSDAALRRKTPFRVI"
     gene            complement(401..1198)
                     /locus_tag="VHX39_13205"
     CDS             complement(401..1198)
                     /locus_tag="VHX39_13205"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3992123.1"
                     /translation="MLNLAVNARDAMAGRGKLTIEAGNARLDDNYAERHVEVTAGQYV
                     MVAVTDTGCGMPPEVAERVFDPFFTTKAPGEGTGLGLSMVHGFVKQSGGHIKIYSKPG
                     HGTTVRIYLPRSRMRESPQVEVDGGPLVGGSEVILLVEDDENVRGTAADMLSELGYRV
                     LLARDADAAMIIIESGVSIDLLFTDVVMPGAFGARELAQQAQLRLPALHVLFTSGYTD
                     NAIVHGGRLDAGVELLSKPYTQEELARKLRKILMEPPAVPPVQGVSD"
     gene            complement(1278..>1647)
                     /locus_tag="VHX39_13210"
     CDS             complement(1278..>1647)
                     /locus_tag="VHX39_13210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992124.1"
                     /translation="FYRDDKFAGYFGSCIDISDQAETEKRLRQAQKMEAIGQLTGGVA
                     HDFKNLLQVISGNLQLLARNVLPQGQPQRRLQNAMAAVARGSNLPVNCFRSPGGRRWS
                     HSPSILAVSSVAWAICFDVH"
BASE COUNT          305 a          533 c          490 g          319 t
ORIGIN      
        1 gggggggcga acgccgggta ccgcgtgggg ccaccgagct gcagtaccgg ttctgtcgct
       61 ccaccgaagt cttcgaagag ggcctcgtgc ggggtggcgt cgccgtcggt ccaacgcagg
      121 tcgttgttgg tctccaacgc atggaagccg tccacggagc cgcttgtccg ccgcctagat
      181 cacccgaaat ggcgtcttcc ggcgcaaggc ggcatcggaa tggcggtggt caccaagccc
      241 ttccttgtgc cgctccagcc aattcttttg ttgacttcgc aaactcagca acccgcgttt
      301 gtcgccaacg cggaactttg tcggtgcgaa tcggcgttgt tgccggatgt gcgacgcaaa
      361 tgtatcgcct ttggtcatgg gcccatcccg ccacatcaac tcaatccgat accccctgca
      421 caggcgggac ggcgggcggc tccatcagaa tcttgcgcag cttccgagcc agctcttcct
      481 gcgtatacgg cttcgacaac agctcgacac cagcgtcgag ccggccacca tggacaatcg
      541 cgttatcggt atagccggac gtgaataata catgcagcgc gggcagacga agctgtgcct
      601 gctgcgccag ttcccgagcg ccaaacgctc ccggcatcac cacgtcggtg aacaggagat
      661 cgattgagac tccgctctca atgatgatca tcgcggcatc ggcgtcgcgc gccagtagaa
      721 cgcggtaacc aagctcactg agcatgtcgg cggccgtgcc acgaacattc tcgtcgtctt
      781 cgaccaggag gatcacctct gatccgccga ccagcgggcc gccgtcaacc tcgacctgcg
      841 ggctctcgcg catgcgcgac cgcggcagat agatgcgaac cgtcgtgcca tgaccgggct
      901 tgctgtaaat cttgatgtgg ccacctgact gtttgacgaa gccatgcacc atcgatagcc
      961 caaggccggt gccttcgccg ggcgctttgg tcgtaaagaa cggatcgaac acacgctcgg
     1021 ccacctccgg cggcatgccg caaccggtat cggtgactgc caccatcacg tattggccgg
     1081 ccgtcacttc gacgtgcctc tcggcatagt tgtcatcgag ccgggcgttg ccggcctcga
     1141 tcgtcagctt gccgcgcccg gccattgcgt cgcgggcgtt gacagccagg ttgagcaaag
     1201 cggtctcaac ctgtgtagga tcgacatagg tgttccaagg ccgccagcga tcaccgtctc
     1261 gatttcgatc gcttcgccta atgcacgtcg aagcagatcg cccatgccac ggacgacacg
     1321 gccaagattg aggggctgtg gctccagcgc ctgccgccgg gcgaacgaaa gcagttgacc
     1381 ggcaagttcg atccgcgcgc cacagccgcc atagcgttct gcaggcgccg ctgtggctgt
     1441 ccctgaggca ggacgttcct ggctagcaac tgcagattac cactgatcac ctgcaggaga
     1501 ttcttgaagt cgtgcgctac tccgccggta agttggccaa tggcttccat cttctgagcc
     1561 tgccggagcc gcttctccgt ctccgcttgg tcggagatgt cgatgcaact gccgaagtaa
     1621 ccggcgaact tgtcatcgcg gtagaag
//
LOCUS       DATAVD010000703         1950 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2671883, whole genome shotgun sequence.
ACCESSION   DATAVD010000703 DATAVD010000000
VERSION     DATAVD010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1950
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2671883"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..676
                     /locus_tag="VHX39_13215"
     CDS             <1..676
                     /locus_tag="VHX39_13215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992125.1"
                     /translation="ALGLPEPQLTGVADDVFLSIGDQLADYVVLLDQGLFDENHYALH
                     SGDVLASGIDLLWHYCEFGWREQRQPNFYFDSRWYAATNPEVNILGVNPLAHYLLAGE
                     PEGRRPIVFFDPVWYRETYDVPDELSPLAHFLTHRRQGKVSPNQFFDPDYYAAQKGET
                     IRAGRDPFARFLVAGLTENFAPSPRFDPVDWRRRSMGRVSRHFRHLLDPARDNPLVHY
                     LLTTYR"
     gene            complement(854..>1950)
                     /locus_tag="VHX39_13220"
     CDS             complement(854..>1950)
                     /locus_tag="VHX39_13220"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3992126.1"
                     /translation="LALERDMELLQHLDKLNYHEAWIGEHHSGGFEIIGSPEVFIAAA
                     AERTKHIKLGTGVVSLPYHNPFILADRAVQLDHMTRGRAMLGVGPGALVHDAKKIGIR
                     PENQRRMMNESLDVIVALLNGETVTRKSDWFELEDAKLQLPSYTQPVMEMAVAAARSP
                     SGALAAGRHGIGMLSIGGTSHDAMVHHAENWELYSEQARLNRHQPHREKWRLVTLFHI
                     AETREQARENVKFGLDHFCDYFRDVATFPIVPGEITDRYKFMIESGNACIGTPDDAIE
                     HIERLLKGSGGFGSILELAHNWADFPATRRHYELMARYVHPHFQGSREWRQESYAYAR
                     DHHGQFVGQAAGAVQAEIDRLAARRAKAGE"
BASE COUNT          365 a          555 c          607 g          423 t
ORIGIN      
        1 agcactgggc ttgccggaac cacagttgac cggtgttgcc gatgacgtgt tcctgagtat
       61 tggcgatcaa ctggcggact atgtcgtact gctcgatcaa gggctgttcg acgaaaacca
      121 ttacgctctg cacagcggtg atgtgctggc cagcggcata gatttgttat ggcactattg
      181 cgaatttggc tggcgcgaac agcgtcaacc gaatttttat ttcgactcac gatggtacgc
      241 cgcgaccaat cccgaggtca acatactggg ggtcaatccg ctggcacatt atctgctggc
      301 gggtgagccg gaggggcggc ggccaatcgt gtttttcgat ccggtttggt atcgtgaaac
      361 ttacgatgtt ccggacgaac tgtcgccgtt ggcgcatttc ctgacacatc ggcggcaagg
      421 caaagtgtcg ccgaaccaat tcttcgatcc ggattactac gcagcacaaa agggcgagac
      481 gatccgggcc ggccgggatc cgtttgcgcg atttcttgtt gccgggctga cggagaattt
      541 cgctccctcg ccgcggttcg atccggtgga ctggcggagg cggtcaatgg gacgggtgtc
      601 gcgccatttc cggcatttgc tggatccggc gcgagacaat ccgttggtgc attatttgct
      661 gacgacgtac cggtgagagg ggttggctcg attccaggcg ccttccgacc gcatcgaagt
      721 gctcattgta aaaacgctgc agtcggtgga acccggtccg ggatccaaga cggtacggta
      781 tcggatcctc ggacatgccg ggacgacggg gggcacgccc gtgccctccg acgcaattcg
      841 atcgtcagtc gctttactcc ccggccttgg cccgccttgc cgcgagccga tcgatttccg
      901 cctgcaccgc gccggccgcc tgaccaacga actggccatg atgatcgcgt gcgtaagcgt
      961 agctttcctg ccgccattcg cgtgacccct ggaaatgtgg gtgcacatac cgcgccataa
     1021 gttcataatg gcgacgggtt gcggggaaat cagcccagtt gtgggcgagt tcgaggatgg
     1081 aaccgaagcc gccggagcct ttcagaagtc gttcgatatg ctcaatggcg tcgtccggag
     1141 tgccgatgca ggcattgccg ctttcgatca tgaacttgta acgatcggtg atctcgcccg
     1201 gaacgatcgg gaaagtggca acatcccgaa aatagtcgca gaagtgatcg aggccgaact
     1261 ttacgttttc gcgtgcctgc tcgcgggttt cggcgatgtg gaacagggtg acgagccgcc
     1321 atttttcgcg gtgcggctga tggcgattga ggcgcgcctg ctcactgtaa agctcccagt
     1381 tttcggcgtg atgcaccatg gcgtcgtgac tggtgccgcc gatcgacagc atgccgatgc
     1441 cgtgacggcc ggcagccagc gcccccgacg gagaacgcgc agcggcgacg gccatttcca
     1501 tcaccggctg ggtatagctc ggcagttgca gtttggcgtc ttccagttcg aaccaatcgg
     1561 acttccgggt gacggtctcg ccgttcagca acgcaacgat cacgtcaagc gattcgttca
     1621 tcatccgtcg ttgattttcc ggccggatgc cgatcttttt cgcatcatgc accaacgcgc
     1681 cgggtcccac gcccaacatg gcgcggccgc gcgtcatgtg gtcgagttgg accgcccggt
     1741 cggcaagaat aaaagggtta tggtagggca acgataccac accggtgccg agtttgatgt
     1801 gtttggtgcg ctcggcggca gcagcaatga acacttcggg cgacccgatg atttcgaagc
     1861 cgccggaatg gtgttcgccg atccacgcct cgtggtaatt cagtttgtcg aggtgctgca
     1921 gcaactccat gtcgcgttcc agcgccagcg
//
LOCUS       DATAVD010000704         3063 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3230123, whole genome shotgun sequence.
ACCESSION   DATAVD010000704 DATAVD010000000
VERSION     DATAVD010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3063
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3230123"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="VHX39_13225"
     CDS             <1..264
                     /locus_tag="VHX39_13225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992127.1"
                     /translation="YGIAWLLEPHVLDDIRTNRLCRLLPNWTSEVEHTFVSYPSRRNL
                     PPRTRVLIDFFVSLGHEVEAQFADTQTKAGGEVRPPARIRLAA"
     gene            complement(321..1568)
                     /locus_tag="VHX39_13230"
     CDS             complement(321..1568)
                     /locus_tag="VHX39_13230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016738213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045735 - nutrient reservoir activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3992128.1"
                     /translation="MVPFSRRNMLAFGAAGAVAATAATGHAATFGDPDEPAQGAVNAN
                     PGSRLDPGPQNPALASQFPNATNPPATDVGDMPEFWASFNNAPRRIQDGGWARQVTQA
                     DFPISNAVSGVNMRLNAGGIRELHWHQAAEWAFMTNGKCRVTVLDTSGRPYVQDVGAG
                     DLWYFPAGFPHSLQGLGAAGCEFVIVFDQGDASEYNTLLVTDWFAHTPPEVLALNFGV
                     SAETFSSIPLHDRWIFQGKEPGSLSADQEAVASGGLPPNPFTFSLIGAAKQYSGRSGT
                     LQLADSTTFKVSKTIAAVLEIIKPGGLRAMHWHPNADEWQYWIKGDGRMTIFNAGPRA
                     ETMDFRAGDIGVVKKNLGHYIQNTGTTDLQLLAVFKAPEYQEMSLADWLAHTPPAMVA
                     QTLNIDPSVMQRFAQGAPGIVPV"
     gene            complement(1617..1757)
                     /locus_tag="VHX39_13235"
     CDS             complement(1617..1757)
                     /locus_tag="VHX39_13235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992129.1"
                     /translation="MRFVACVDLDDLASPQGNPHAKLPLNYDFRSDAIPTQHTISLVA
                     AS"
     gene            complement(1834..>3063)
                     /locus_tag="VHX39_13240"
     CDS             complement(1834..>3063)
                     /locus_tag="VHX39_13240"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3992130.1"
                     /translation="IDRVMQRLGQETRGISGVRLFMQPVQDINIGGRLTATQYQYTLT
                     DVDLNELNKWGPIIETALSKLPQLADVTSDQQSAAPQLTLAINRDSASRLGITPAQID
                     NVLYDAFGQRPIAQLYTSLNQYFVIMEVPPAFQFGPNALQRIYVRSQTSGMVPLSELV
                     TEHTTVSPLSVNHQGQFPAVTISFNLKGNVPLGPAVSAIQRQMATLQVPPTISASFQG
                     NAQAFQSSLSSTPVLIVAALVAVYIILGMLYENTIHPLTIISTLPAAGAGALVMLLIC
                     GFGLDVIGIIGIILLIGIVKKNGIMLVDVALEAERSRGLTAEQSIHEACLLRFRPILM
                     TTMCALLGSLPLMLGTGTGSELRQPLGYAMAGGLVVSQILTLFTTPVVYIYMDKLAHL
                     SFRRIARPHQHAAAPAE"
BASE COUNT          594 a          909 c          964 g          596 t
ORIGIN      
        1 tatggcatcg cttggctttt ggaaccgcac gtgttggatg acatccgcac caaccggctc
       61 tgccggctgc taccgaattg gacttccgaa gtggaacaca cctttgtaag ttatccgtca
      121 cgacgcaacc tgccgccccg cacgcgcgtg ttgatcgact tttttgtttc gctgggtcat
      181 gaggtggaag cacagtttgc ggatactcaa acaaaggccg gcggcgaagt taggccgccg
      241 gcgcgtatcc gattggctgc gtgagcgcat ggagtgtgaa tgcgagtgaa atgacgcgat
      301 cccgaacgag cgtcgtgcga tcagacgggg acgattcccg gcgctccctg tgcaaatcgc
      361 tgcatcactg acgggtcgat gttcagtgtc tgcgccacca tcgccggcgg cgtatgagcc
      421 agccagtcgg cgagagacat ctcctgatat tcgggtgcct tgaagacggc caggagctga
      481 aggtccgtcg tgccggtatt ctggatgtaa tgaccaaggt tctttttgac gacaccgatg
      541 tcgccggcgc gaaaatccat tgtctcggcc cgcggtccag cattgaatat cgtcatgcgg
      601 ccgtcaccct tgatccagta ctgccactcg tcggcatttg gatgccagtg catcgcgcgc
      661 aggccacccg gcttgatgat ctccagcacg gcggcgatcg tcttcgaaac tttgaacgtg
      721 gtgctgtcgg ccaattgcag ggtgccgctc cggccgctgt attgctttgc cgccccgatc
      781 agagagaagg tgaacggatt gggcggcaag cctcccgacg ccaccgcttc ctggtccgcg
      841 gacagtgatc cgggctcctt cccttggaaa atccagcggt cgtgcagagg aatcgagctg
      901 aaggtctccg ctgagacacc aaagttgagt gcgagcacct cgggcggcgt atgagcgaac
      961 cagtcggtca ccagcagtgt gttgtattcg ctggcatcgc cctggtcgaa tacgatgacg
     1021 aattcgcagc cggcagcgcc gagcccttgc aatgaatgtg gaaagccggc ggggaagtac
     1081 cacagatcgc ccgcaccaac gtcctgtacg taaggccggc cggacgtgtc cagcaccgtc
     1141 acgcggcact tgccgttggt catgaaggcc cattctgcgg cctggtgcca gtgcagttcg
     1201 cggatgccgc cggcattgag ccgcatgttg acgccggaga cggcattgga aatcgggaaa
     1261 tcggcctgtg tcacctgtcg cgcccacccg ccgtcctgga tacgcctggg ggcgttgttg
     1321 aacgatgccc agaactccgg catgtcgccg acatccgtgg cgggcgggtt ggtggcgttg
     1381 gggaattgcg acgccagggc cggattctgc ggaccaggat ccaatcggct gccgggattc
     1441 gcgttgaccg cgccctgcgc gggctcgtcc ggatcaccaa aagtggctgc atggcctgta
     1501 gcggcggtcg cagctacagc tccggcagca ccgaaggcaa gcatattacg acgggagaac
     1561 ggaaccatgt gcctctctct cctgaatgga atgacaagac cacccgcggt agtcacttac
     1621 gaagcagcta caagtgagat ggtgtgctgt gttggaatcg catcgctccg aaagtcgtag
     1681 ttcaatggaa gtttggcatg gggattgccc tgcggtgatg ccagatcatc gagatcgaca
     1741 caggcgacga aacgcatggt agcgtccgga tgatcagcgg actggtcgcc gggaagtccg
     1801 gacgacccgt cttcatctcg aggtggagcc ggcttattcg gcaggagcgg ctgcgtgctg
     1861 gtgcggccgt gcaatgcgcc ggaagctcag atgggcgagc ttatccatgt agatatagac
     1921 caccggcgtt gtgaacagtg tgaggatctg ggaaaccacc aggccgcccg ccatcgcgta
     1981 acccagcggc tggcgcagtt cggacccggt accggtcccc agcatcaacg gcaggctgcc
     2041 gagcaaggcg cacatcgtgg tcatcagaat cggccggaag cgcagcaggc acgcctcatg
     2101 gatcgattgc tcggcggtaa ggccacggct gcgctccgct tccagcgcga catccaccag
     2161 catgatgcca ttcttcttca cgattccgat cagcaggatg atgccgataa tgccgattac
     2221 atccaatcca aaaccacata tcagcagcat cacaagggcg cccgcgccgg cggccggcag
     2281 ggtggaaatg atcgtcaacg gatggatcgt attttcgtac agcatgccca ggataatata
     2341 gaccgccacc aatgccgcga cgatcagaac cggcgtgctg gacagcgagc tctggaaagc
     2401 ctgcgcgttg ccctggaaac tggcgctgat cgtcgggggc acctgcagtg ttgccatctg
     2461 ccgctggatc gccgacaccg ccggacccag cggcacattg cccttcaggt tgaagctgat
     2521 cgtcacggcg gggaattgcc cctggtgatt caccgacaac ggcgagaccg tggtgtgctc
     2581 cgtgaccagc tcactcagcg gcaccatgcc cgaggtctgc gagcggacgt agatccgttg
     2641 cagtgcgttc gggccaaact ggaacgcggg aggcacctcc atgatgacga agtactggtt
     2701 caggctggtg tagagctgcg cgatcgggcg ctggccgaag gcatcgtaca acacgttatc
     2761 gatctgcgct ggcgtgatgc ccagccgcga cgcactatcc cggttgatcg ccagggtgag
     2821 ctgcggcgcc gcggattgct ggtcgctggt cacgtcggcg agctgcggca gcttcgacag
     2881 cgccgtctcg atgatcggtc cccacttgtt cagttcgttc agatcgacat cggtcaaagt
     2941 gtactggtac tgcgtcgcgg tgagccggcc accgatgttg atgtcctgca ccggctgcat
     3001 gaacagcctc acaccgctga tccctcttgt ctcctggccg agtcgctgca tcacgcggtc
     3061 gat
//
LOCUS       DATAVD010000705         1787 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3230239, whole genome shotgun sequence.
ACCESSION   DATAVD010000705 DATAVD010000000
VERSION     DATAVD010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3230239"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..436)
                     /locus_tag="VHX39_13245"
     CDS             complement(<1..436)
                     /locus_tag="VHX39_13245"
                     /inference="COORDINATES: protein motif:HMM:NF015682.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HEX3992131.1"
                     /translation="MLDNPPLVTIHRGIRRPDPKLIEAFRGAQTSHLADAMDGRGALD
                     YRIKPVDPGNASFVGPALTAFAYPADVLAVFAALSEAQQGDVIVCANDAFTKTAVIGD
                     LAAGMMKNAGVAAFVTDGLARDKAGIIDAGLPLFCCGIQPNSP"
     gene            541..1290
                     /locus_tag="VHX39_13250"
     CDS             541..1290
                     /locus_tag="VHX39_13250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX3992132.1"
                     /translation="MIELSPAPARLPDGRRVYAIGDIHGCAAQLANLHASVQEDLARR
                     PVASAVLLHVGDYVDRGVDTRGVIARLVDGSPVPGTEMINLMGNHENTMIEALNGERA
                     AATDWLFTGGRPSLQSYGVDPDSPRETWRAHVPDRHMQFLRELKLMHREGEYVFVHAG
                     VRPGVPLAEQARDDLLRMRQPFLYSEMNFGAVVVHGHSPVKAPVIRHNRIAIDTGAVF
                     GGEMTCVVLEGDRLGFLTAEPVGEPVSIAHR"
     gene            complement(1308..>1787)
                     /locus_tag="VHX39_13255"
     CDS             complement(1308..>1787)
                     /locus_tag="VHX39_13255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019086401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HEX3992133.1"
                     /translation="ARVVDLGAAPGGWIQVALRRGASIVVGVDLLPMDPIPGATLLVG
                     DFDDPDMPVRLAAILGSKADLVLSDMAPNTTGHAATDHLRIMALAELAVIFARGVLAP
                     NGSFVAKVFQGGSERTMLVALKRDFVSVRHAKPPASRKESSELYVVATGFRGTSAEN"
BASE COUNT          340 a          582 c          534 g          331 t
ORIGIN      
        1 ccggcgagtt gggttgaatg ccgcagcaga aaagcggcag gcccgcgtcg attatgccag
       61 ccttgtcgcg tgccagacca tcggtcacga acgccgcaac gccagcattc ttcatcatgc
      121 cggcagcaag atcgccgatc accgcggttt ttgtaaatgc atcatttgcg cacacgatca
      181 cgtctccctg ctgcgcctcg gacagtgccg caaatacagc cagcacatcg gcgggataag
      241 cgaacgccgt cagcgccggg cccacgaaac tggcattgcc gggatcgacc ggcttgatcc
      301 ggtaatccag cgccccgcgc ccatccatcg catcggcgag atgcgatgtc tgcgctcctc
      361 ggaaggcttc aatcaacttt ggatcgggac ggcgaatgcc acgatgaatg gtcaccagcg
      421 gcgggttatc gagcatggac tatctccagt tgcgattgtc atccgttgct gcgcctgcag
      481 tgcaggtgcg acccaatacc tcttgcccaa agaccaaccg ggctgatagc cggtattgtt
      541 atgatcgaac tctcccctgc cccggccaga ttgcctgacg gccggcgcgt ctatgccata
      601 ggagacatcc atggctgtgc cgcgcaactg gcaaatctgc atgcctcggt ccaggaggat
      661 ctggcgcgcc gtcccgtcgc ctcggcggta ttgttacacg tcggcgacta tgtcgaccgc
      721 ggcgtcgata cgcgcggcgt gattgcccgt ctggtcgatg gttcccccgt cccgggcaca
      781 gaaatgatca atctcatggg caatcacgag aacaccatga tcgaagcgct gaacggcgaa
      841 cgggcggcag cgaccgactg gttgttcacc ggcggccgtc cgtcgttgca gagctacggc
      901 gtcgatccgg attccccgcg tgagacatgg cgcgcgcatg ttcctgatcg acacatgcag
      961 ttcttgcgcg aactgaagct gatgcaccgc gagggcgagt acgtctttgt ccacgccggg
     1021 gtcaggccgg gcgtgcctct cgcggaacag gcccgcgacg acttgttgcg gatgcggcaa
     1081 ccctttctgt actcggaaat gaatttcggt gctgtggtgg tgcacgggca ttcgccggtg
     1141 aaggcaccgg tcattcgcca caaccgcatc gcgattgata ccggggctgt gttcggcggc
     1201 gagatgacct gcgtggtgct ggaaggcgat cggctcggct tccttaccgc cgaaccggtt
     1261 ggcgagccgg tttccattgc gcatcgctga ctgacgcgga agcccggtca gttttctgct
     1321 gaagtgcctc ggaagccggt tgcgacgacg tacagctcac tcgactcttt gcggctcgcc
     1381 ggcggcttgg cgtggcggac actcacaaaa tcccgcttca gcgccaccaa catcgtccgc
     1441 tccgacccac cctgaaatac cttcgcgaca aacgagccgt tcggtgcgag cacccctcgc
     1501 gcgaaaatca ccgccagctc cgccagggcc ataattcgga gatgatcggt cgccgcatgc
     1561 ccggtcgtgt tcggggccat gtcggacagc acaagatcgg ccttggagcc caatattgcc
     1621 gcaagccgca ccggcatgtc cgggtcatcg aagtcgccga cgagcagcgt cgcgcccgga
     1681 attggatcca tgggcagcag atcgacaccc acaacgatgc tcgccccacg ccgcagcgct
     1741 acctgtatcc aaccgcccgg cgcagcacca agatcgacaa cccgagc
//
LOCUS       DATAVD010000706         2017 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3043286, whole genome shotgun sequence.
ACCESSION   DATAVD010000706 DATAVD010000000
VERSION     DATAVD010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2017
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3043286"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1002
                     /locus_tag="VHX39_13260"
     CDS             <1..1002
                     /locus_tag="VHX39_13260"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HEX3992134.1"
                     /translation="TETATPVERRLLISFEVSGQDYGLPLDAVREIIPLPDSIAVAPQ
                     AEAVLLGVTAWRDSLLPLLSLRGLLGFPPAAAATGREKVFVTVVNGASVGLVADRARA
                     LVRAEATAIDPAPAMLAARSGGESKIAAIFRDNGGRNLISVLAPEQLFREDVMRRIGE
                     SSLHSVSQPTAPASVAVLHFVVFRLGDEEFGLPIAAVDEVARVPTNITRVPKMPDFLE
                     GVINLRGEVLPVVDQRRRFDLPKFTDGRQRLIVVRAERHRAGLIVDRVSEVFRAAATA
                     IEPPPDLTGEGARLVNGVINDPLASRMILLLDPAELLTQVEQRALDRLEASEMVGSL"
     gene            999..>2017
                     /gene="cheB"
                     /locus_tag="VHX39_13265"
     CDS             999..>2017
                     /gene="cheB"
                     /locus_tag="VHX39_13265"
                     /EC_number="3.1.1.61"
                     /inference="COORDINATES: protein motif:HMM:NF001965.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis-specific protein-glutamate
                     methyltransferase CheB"
                     /protein_id="HEX3992135.1"
                     /translation="MIKLLIVDDSALVRKLLTGIFGEQADFEVRQARDGIEALAMLGD
                     YAPDVVTLDVHMPRMDGLTCLDRIMIEHPCPVVMVSTLTAEAADATLEALHLGAVDFI
                     AKPAGPISMDIHEIAPMLVEKVRAAAGARLRPSLRLRERVRHRVGSVAPRPRRSALSV
                     APFSGPNRATDVLAGDGLVLIGVSTGGPPALETLLTRLHADFPWPILIAQHMPASFTG
                     PLAKRLDGLSALTVTEVRQTATLNPGHVYIGRGDADLIVTTRRGRLVAMAAPSNPEFP
                     WHPSADRLVRSAMDHLPASQIIGVLLTGMGSDGAAAMADLHAHGGRTIAEAEETAVVW
                     GMPGEL"
BASE COUNT          338 a          604 c          680 g          395 t
ORIGIN      
        1 accgaaacag ccactccggt cgagcgtcga ctgctgatct catttgaggt ctcggggcag
       61 gattacgggt tgccgctcga tgcggtgcgc gagatcattc cgcttcccga ctcgattgcc
      121 gttgcgccgc aagccgaggc cgtgcttctg ggtgtgacgg catggcgcga cagcctgctt
      181 ccgttgttgt cgttgcgcgg gctgttgggg ttcccaccgg ctgccgccgc gaccggccga
      241 gagaaagtgt ttgtcaccgt ggtgaacggt gcctcggtcg ggctggtcgc cgatcgggcg
      301 cgggcactgg tgcgggccga ggccaccgcg atcgatccgg cgccggccat gttggccgca
      361 cgcagcggag gtgaatcgaa gatcgcggcg atctttcggg ataatggtgg gcggaacctg
      421 atttcggtac tggcccccga gcagctgttt cgggaggacg tgatgcggcg catcggcgaa
      481 tcatcgttgc attccgtgtc gcagccaact gcgccggcaa gcgtcgccgt cctgcacttt
      541 gtcgtgttcc gactgggcga tgaagaattc ggcctgccga tcgcggcggt cgatgaagtc
      601 gcgcgggttc cgacgaacat tactcgggtg cccaaaatgc ccgactttct ggaaggcgtg
      661 attaacctgc gaggcgaggt attgccagtt gtcgatcaac gccggcgctt tgatttgcca
      721 aagttcaccg atggccggca gcggctgatc gtggttcgtg ccgagcggca tcgcgcggga
      781 ctgatcgtcg accgtgtctc cgaagtattt cgcgccgcag ccaccgcgat cgagccaccg
      841 cccgatctga ctggcgaagg tgcgcggctg gtcaacggcg tgatcaatga cccacttgca
      901 agtcgaatga tcctgctgct cgatccggcc gagttgctga cgcaggtcga gcaacgtgcg
      961 ctggaccgcc tcgaagcaag tgagatggtc ggcagcttgt gatcaagctg ctcattgtcg
     1021 atgattcggc gttggtgagg aaattgctga ccgggatctt cggcgaacag gcggatttcg
     1081 aagtccgcca ggcccgcgac ggcatcgagg ctttggccat gctcggcgac tacgcgccgg
     1141 atgtggttac gctggatgtg cacatgccgc gaatggacgg cctcacctgc ctggaccgga
     1201 tcatgatcga gcatccctgt ccggtggtga tggtgtccac attaacggcg gaggcggccg
     1261 acgcgacgct tgaagcgctg catcttggtg ccgtcgactt cattgccaaa ccggctggac
     1321 ctatttccat ggacatccac gagattgcgc caatgctggt tgaaaaagtc cgtgccgcgg
     1381 ccggcgcgcg attgagaccc agtttgcgtc tgcgcgaacg ggtccgtcat cgggttggca
     1441 gtgtcgctcc gaggccgcgg cgaagcgccc tatcggtcgc gccattctcc gggcccaatc
     1501 gagcgaccga tgtcctggcg ggcgatgggc tggtgctgat cggcgtctcg accggcggcc
     1561 cgcctgcgct cgagactttg ttgacccgac tgcatgccga ttttccatgg cccatcctga
     1621 tcgcccaaca tatgccggca agcttcacgg gcccactggc gaaacgcctg gacgggctgt
     1681 ctgcgttgac ggtcacggaa gtgcggcaaa cggcaacact gaaccctgga cacgtctata
     1741 tcggccgcgg tgacgccgac ctgatcgtca ccacacggag aggccgtctg gtcgcaatgg
     1801 cggctccctc gaatcccgaa ttcccgtggc accccagcgc ggatcgcctg gtccggagcg
     1861 cgatggatca tctgccagcg agtcaaatca ttggcgtcct gctgaccggg atgggatcgg
     1921 atggagcggc ggccatggcc gatttgcatg cccatggcgg gaggaccatc gccgaggcgg
     1981 aagaaacagc ggtggtctgg ggcatgcccg gggaact
//
LOCUS       DATAVD010000707         2992 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2298967, whole genome shotgun sequence.
ACCESSION   DATAVD010000707 DATAVD010000000
VERSION     DATAVD010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2992
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2298967"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..340
                     /locus_tag="VHX39_13270"
     CDS             <1..340
                     /locus_tag="VHX39_13270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992136.1"
                     /translation="AFDAGVVWLVGARPGVPELLAPQVARRAAIVFGETVVSGEIFSL
                     ASPGAAGGTGGSITRDATRPEQTVQITNPGEAVDRPVPASTLRQRLAAWQQTAPMTVV
                     ANQQQTDIAC"
     gene            351..2102
                     /locus_tag="VHX39_13275"
     CDS             351..2102
                     /locus_tag="VHX39_13275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013641033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin domain-containing protein"
                     /protein_id="HEX3992137.1"
                     /translation="MPQSVLLPAGAPFGAEQISALNSVIATSTAEQRAWLSGFLAGVQ
                     AANAPAPAIPAAPPKARAPLTILFGTESGNAEALAMRARKSAAKLGFAVKLADMADTS
                     PAQMAEIPNLLLIASTWGEGDPPQRAVDFYEAIMADDAPRFNKTRFAVLSLGDRAYAQ
                     FCEIGRRFDERLAALGATRIVDRIDCDLDFETPATAWIDATLDQISQTASDVPVEDTS
                     VIHVDFARPTAEAEAETWTRARPFEAEITEHVRLTGSRSSSDTRHIALSLEGSGIEYE
                     PGDSLGIVPRNDPALVDAVLNATGLDHDTALRAALRDRYDITTLTAKQVEDFAALAGT
                     ARQAADWTNGRQVIDLLETAPQKFTADQLTGLLRPLPPRYYSIASSRQAVGEEAHLLV
                     AGVRYETHGRQRAGVASIDMNEQRKTGDRLQIFLRPNPHFRLPADPSRPMIMIGPGTG
                     VAPFRGFLQQREATGARGKNWLVFGHRHYLHDFLYQLEWQDWIKDGVLNRLDVAFSRD
                     QPEKRYVQHALWDARRDLHAWIQEGAAIYVCGDASAMAKDVDDTLIRILADQTGQDGK
                     AALDRLRRDGRYLRDVY"
     gene            2104..>2992
                     /locus_tag="VHX39_13280"
     CDS             2104..>2992
                     /locus_tag="VHX39_13280"
                     /inference="COORDINATES: protein motif:HMM:NF013259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite reductase"
                     /protein_id="HEX3992138.1"
                     /translation="MADRPLSANERIKENSDFLRGTIAEGLTIPQTGAIADDDQQLTK
                     FHGIYLQDDRDLRAERGRQRMEKAFIFMARMRVPSGILTPAQYLAADRMARERGNGTL
                     RFTTRQTIQFHGIIKSNLRPLIQGLHTEMLDTIAACGDVNRNVCASVDPWRRAGHEAV
                     SKLAGDIGTYLLPRSRAWHEIWIGEERVAGGVEEDEPIYGRTYMPRKFKIGVALPPHN
                     DVDVFAQDLSFVAIEQRQKIVGYDIIVGGGMGMTHGEPETYPRAGNVIGFCKPERAIA
                     VAEAVVTMQCDHGDRSNRKQ"
BASE COUNT          587 a          937 c          946 g          522 t
ORIGIN      
        1 agcgttcgac gcgggcgttg tttggctggt cggcgcccga ccgggcgtcc cggaactgct
       61 ggcgccgcag gtagcgcgga gggcggcgat tgtcttcggt gagacggtgg tctcgggaga
      121 gattttttct ctggcgagcc caggggccgc cggaggtaca ggcggatcaa tcacccggga
      181 tgcaacgcgc ccggaacaaa ccgtgcagat cacgaacccg ggggaagcgg tcgatcggcc
      241 cgtcccggcg tcaacgctac gacaacggtt ggcggcatgg cagcagaccg caccgatgac
      301 cgttgtcgca aatcagcaac agaccgatat cgcctgttaa ggaacagaag atgccgcaaa
      361 gtgttttact ccctgcaggc gctccgttcg gagccgagca gatctccgca ctgaacagcg
      421 tgattgccac ctcgaccgcc gagcagcgcg cctggttgtc cggatttctg gccggcgtgc
      481 aggccgccaa cgcgccggca ccggcgattc ctgccgcacc cccgaaagcc cgtgcaccgc
      541 tgaccattct gttcggcacc gaatcgggta atgccgaggc gctggccatg cgcgcccgca
      601 aatcggccgc caaacttggc ttcgccgtaa aactcgcgga catggccgat acgtccccgg
      661 cacaaatggc ggaaatcccg aacctgctgt tgatcgccag cacctggggt gagggcgacc
      721 cgccgcaacg tgccgtcgac ttctacgaag cgatcatggc ggacgatgcg ccgcgcttca
      781 acaaaacccg gtttgccgtg ctgtcacttg gcgatcgcgc ctatgcgcaa ttctgcgaaa
      841 ttggccgccg cttcgacgaa cgcctcgcgg cgttgggggc gacccggatc gtggatcgga
      901 tcgactgcga tctggatttc gaaactccgg ccactgcctg gatcgatgcg actctggacc
      961 agatcagcca gacggccagc gacgtcccgg tcgaggacac ctcggtcatc cacgtcgatt
     1021 tcgcccgccc gaccgcggaa gcggaagccg agacctggac ccgcgcccgc ccgttcgagg
     1081 ctgaaatcac cgaacatgtc cgcctgaccg gcagccgttc cagctcggat acacggcata
     1141 tcgcgctctc gctcgaaggc agcgggatcg aatacgaacc gggcgattcg cttggtatcg
     1201 tgccgcgcaa cgatcccgct ttggtcgatg ccgtgctgaa cgcgaccggt ctggaccacg
     1261 acacggcgtt gcgtgctgcg ttgcgcgacc gctacgacat caccacgctg accgcgaaac
     1321 aggtcgagga cttcgccgcg ttggccggca ccgcgcgaca ggccgctgat tggaccaacg
     1381 ggcgtcaggt catcgatctg ctggagactg cgccgcaaaa attcaccgcg gaccagttga
     1441 ccggtttgtt acggcctttg ccgccgcgct attactcgat cgcatcgagc cgtcaggccg
     1501 ttggcgagga agcgcatctg ctcgtcgccg gtgtccggta tgaaacgcat ggcagacagc
     1561 gcgcgggtgt tgcctcgatc gatatgaatg agcaacgtaa gaccggcgat cggctgcaaa
     1621 tctttctgcg cccaaacccc cacttccgcc tgccggccga tccgtcgcgg cccatgatca
     1681 tgattgggcc aggcactggc gtcgcaccgt tccgcggctt tctgcagcaa cgcgaagcca
     1741 ccggcgcgcg cggcaagaac tggctggtgt tcggtcatcg tcactatttg cacgacttcc
     1801 tgtaccagct cgagtggcag gactggatca aggacggcgt gctgaaccgt ttggacgtcg
     1861 cgttttcccg cgatcaacca gagaagcgct acgtgcaaca tgcgttgtgg gatgcgcgcc
     1921 gggacctgca cgcctggatc caggaaggtg ctgcgatcta tgtctgcggc gatgcctctg
     1981 ccatggcgaa ggacgttgat gacacactga tccgcattct tgccgatcaa accgggcagg
     2041 atggcaaagc ggcactggat cggctgcgcc gcgacggccg ctatctgcgg gatgtttact
     2101 gacatggccg accgtccgct gtcagcaaac gaacgcatca aggaaaacag tgatttcctg
     2161 cgcggaacga tcgccgaggg cctgaccatt ccgcaaaccg gagcgatcgc cgacgacgat
     2221 cagcaactga cgaaattcca cggcatttac ttgcaggacg accgcgatct gcgcgccgaa
     2281 cgtggccgtc aacgcatgga aaaggccttt attttcatgg cacggatgcg ggtgccgagc
     2341 gggatcctga cgccggcgca atatctcgcg gcggaccgga tggcgcgtga gcgcggcaac
     2401 ggcacgctgc gctttaccac gcggcagaca atccagtttc acggcattat caaaagcaat
     2461 ctgcgtccgc tgatccaagg cctgcacacc gaaatgctgg ataccattgc ggcgtgcggc
     2521 gatgtcaatc gcaacgtctg cgcctcggtc gatccgtggc ggcgcgcggg tcatgaagcg
     2581 gtgagcaagc tcgccggcga catcgggaca tatctgttgc cgcgcagccg cgcctggcac
     2641 gagatctgga tcggcgagga acgtgtcgcc ggcggcgttg aagaggacga accgatctac
     2701 ggccgtactt acatgccgcg caaattcaag atcggcgtcg cactcccgcc gcataacgat
     2761 gtcgatgtgt tcgcgcagga cctgagtttc gtggcgatcg aacaacgaca gaaaattgtt
     2821 ggttacgaca tcatcgttgg cggcggcatg gggatgacgc acggtgagcc ggagacgtat
     2881 ccgcgagccg gcaatgtcat aggattctgc aaaccggagc gcgcgattgc cgtcgctgaa
     2941 gcggtggtga cgatgcaatg cgatcacggc gaccggtcga accgcaagca gg
//
LOCUS       DATAVD010000708         3386 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3043829, whole genome shotgun sequence.
ACCESSION   DATAVD010000708 DATAVD010000000
VERSION     DATAVD010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3386
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3043829"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3276)
                     /locus_tag="VHX39_13285"
     CDS             complement(<1..3276)
                     /locus_tag="VHX39_13285"
                     /inference="COORDINATES: protein motif:HMM:NF020768.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046556 - alpha-L-arabinofuranosidase
                     activity [Evidence IEA];
                     GO_process: GO:0031221 - arabinan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arabinofuranosidase catalytic domain-containing
                     protein"
                     /protein_id="HEX3992139.1"
                     /translation="MVLRSENLASGKPVGCCKTRIRRCSTGWRLMSSQNQEIRAAGPP
                     GQDKRTTMKTKMKRALDLALSLAFAAAALAIPNHAQAAPPRPQGPCDIYAKAGDPCVG
                     AHSTTRAMYAAYKGPLYQVLRRSDGKKLDIGVVEPNGSDPGGYANAAAQDAFCANTYC
                     WITTIYDQSGKHNDLTQAPRGAFSGPATGGFNNVPLADMAPISIMGHKVYGVFIEPGM
                     GLREDDPKGVAVDDQAEGQYWVISGKHFNGGCCFDYGNAEIDSHDDDAGTMETAYFGD
                     ATPWYHGNPPGPWVMTDQENNLVGCVNPGSRSKLCPTLPNMTSRFVTAMAKGEPHHWT
                     TLGGDSQRGPLQVMFDGPRVDAAYDPMRKQGAILLGNGGDNSNGSQGTFYEGAVTAAN
                     TFPTDATDQLIQANVVAAKYAVPIVGVAPSSAVDTPPGLQTFTPGSSQDTTVTFTNST
                     GNPVTGVKISLNAPKGWTATASGNTTPSESIAPGASVSATFKVTSGQSPFNGDLVADV
                     SWTGASAKRSETMAEKVRNAPPVKINEFSAHTTQPFIEIYNDSSAPADLSNWTLAEHP
                     TQQAIVSTVKIPAGTKVAPHGFYLLGLSNSGLSAATRAGEKTLYVRSTTGMSNGDTVT
                     IGAGATAETHKIASVGTPASAATTLWEPLPEGPILTIPAGTTSIPVTSTAGFEVGQKV
                     ALGYGQTYPAVSSGTERFEIATVTAVGKPGTQALLGAEAPAGSTNIKVTSVANISPGD
                     KIRLDVDAVGHGIEWVTVKSVGTQAVRMGLLTETAAGATSVQVRAGFGPNPSRLAAGD
                     QVIIGTPATWQTVTVSAVDGSGPGGTTVTFSPALKVAHVAGENVMLPGTGLELTAPLK
                     FNHSANLPFSDRGTGITFQPATAFAHSSNEPIQALGTGITLDSALTKEHPIEGVVHDA
                     AVTTAGYQGTPQPNQWFGGPALSPAAGNIVLRDATGQVVDSLNYGLVVDPWAAEGFQG
                     NTPTETSGCRVPAVGGAGGGGRAAAPVSEPSRSAGRFPDGADTDSNCTDFHVQSAATL
                     AAAASAGASNIKVASVEGFHAGQAILIGAAGDMEQATIASVGTPGASTTDAAVAAGAT
                     SIPV"
BASE COUNT          526 a          963 c         1206 g          691 t
ORIGIN      
        1 gaccgggatg gaggttgcgc cggcagctac agcggcgtcg gtcgtgctgg cgccgggtgt
       61 gccgacggac gcgatggttg cctgctccat gtctccggcc gcgccgatca ggatggcctg
      121 tccggcgtgg aagccttcta cgctcgccac tttaatgttc gacgcgcccg cggatgcagc
      181 agcggcgagg gtcgcagccg actgcacatg gaagtcggta cagttggagt ccgtgtccgc
      241 gccgtcgggg aaacggcccg cgctgcggga aggctcgctg accggcgcgg ccgcacgacc
      301 accgccgcct gcgccgccca cggccggtac gcggcagccg ctggtctcgg ttggcgtgtt
      361 gccctggaag ccttcggcgg cccagggatc gactaccagg ccgtagttga ggctgtcgac
      421 gacctggccg gttgcgtcac gtagaacgat attgccggct gccggcgaga gggccgggcc
      481 accgaaccac tggttgggct ggggcgttcc ctgatagccc gcggtcgtga cggcggcgtc
      541 atggactaca ccctcgattg gatgttcttt ggtgagcgcg ctgtcgagcg tgatgccggt
      601 gccaagcgcc tggatgggtt cgttgctgga gtgggcgaag gcggtggcgg gctgaaaggt
      661 gatgccggtg ccgcggtcac tgaaaggaag gttggcggag tggttgaact tcagaggcgc
      721 ggtcagttcc aggccagtac cgggaagcat tacgttctct cccgcgacgt gcgccacctt
      781 gagtgcgggc gagaaggtga cggtcgtgcc tccggggccc gatccatcga ccgccgaaac
      841 ggtcacggtc tgccaggttg ccggtgtgcc gatgatgacc tggtcgcctg cggcgaggcg
      901 gctggggttg gggccaaaac cggcgcgcac ctgtacgctg gtggcgccgg cggctgtttc
      961 cgtcaagagg cccatgcgga cggcttgcgt gcctacgctt ttgacggtga cccactcgat
     1021 gccatggccc acggcgtcca catccaggcg gattttgtcg ccgggtgaga tgttggcgac
     1081 ggaagtcacc ttgatgttgg tggaaccagc tggggcctca gcgccaagca gtgcctgcgt
     1141 tccgggcttg cctaccgccg tcacggtggc gatctcaaaa cgttcggtgc cgctggacac
     1201 ggccgggtag gtctggccat agccgagggc gactttctgg ccgacctcaa aaccagctgt
     1261 gctggtgacg gggatggagg tggtcccggc cgggatggtg aggatcggac cttctggaag
     1321 cggctcccat agcgtggtgg ccgcggaggc gggcgttccc acgctggcaa tcttgtgggt
     1381 ttccgcagtc gcaccggccc cgatggtaac tgtgtcgccg ttgctcattc cggtggtgct
     1441 gcggacgtag agggttttct cgccggcacg cgttgcagcc gagaggccgg agttcgaaag
     1501 gccgagcagg tagaagccgt gcggcgcgac cttggttccc gcaggaatct tcaccgtgga
     1561 gacgatggcc tgctgggtgg gatgctcggc aagcgtccag ttggagaggt cggccggggc
     1621 ggagctgtcg ttgtagatct cgatgaaggg ctgggtggtg tgggcgctga actcgttgat
     1681 tttgaccgga ggcgcgttgc gcaccttctc tgccatggtt tcagagcgtt tggcgcttgc
     1741 accggtccag gagacgtcgg ctaccagatc gccgttgaac ggagattggc ccgaggtgac
     1801 cttgaaggtt gcgctgacac ttgcgcccgg ggcgatcgac tcggaaggcg tggtgttgcc
     1861 agaggcagtc gctgtccatc ccttgggagc gttcagactg attttcacgc cagtgacggg
     1921 gttgccggtg ctgttggtga acgtgacagt ggtgtcctgc gaagaacccg gggtgaaggt
     1981 ctgaagcccg gggggcgtat cgaccgccga ggacggtgcg acaccgacga tcggcacagc
     2041 gtacttcgcc gcgacgacat tggcctggat gagctggtcg gtcgcgtcgg tgggaaaggt
     2101 gttggcggcg gtgactgcgc cttcgtagaa cgtgccctgc gaaccgttgc tgttgtcgcc
     2161 gccgttgccc agcaggatcg cgccctgctt gcgcatggga tcatatgccg catcgacgcg
     2221 gggtccatcg aacatgactt gcagcgggcc tctctgcgag tcgccgccga gtgtagtcca
     2281 gtggtgtggt tcgcctttgg ccatcgcggt tacgaagcgc gaggtcatgt ttggcagggt
     2341 tgggcagagt ttggaacgcg aaccgggatt gacgcaaccg accaggttgt tttcctgatc
     2401 ggtcatcacc catggtccgg gagggttgcc gtggtaccac ggggtggcat cgccgaagta
     2461 ggcggtttcc atggtgccgg catcgtcgtc gtggctgtcg atctcggcgt tgccataatc
     2521 gaaacagcag cctccgttga aatgcttgcc gctgatgacc cagtactggc cttcggcctg
     2581 gtcgtcgacg gcgacgccct taggatcgtc ctcgcgcaag cccatgccgg gttcgatgaa
     2641 tacgccgtac actttatggc ccatgatcga tatgggagcc atgtcggcga gtggaacatt
     2701 gttgaagccg cctgtggccg gaccgctgaa ggcgccgcgc ggggcctggg tgaggtcgtt
     2761 gtgcttgccg gactgatcgt agatggtggt gatccagcaa taggtgttgg cgcagaaggc
     2821 gtcctgggcg gccgcgttgg cgtacccacc cgggtccgag ccattgggct cgactacacc
     2881 gatgtccagc ttcttcccgt cggaccggcg cagcacttga tacagcgggc ccttgtaggc
     2941 tgcgtacatg gcgcgcgttg tgctgtgtgc tccgacgcag ggatcgcctg ctttggcata
     3001 gatgtcgcat gggccctgag gcctcggcgg ggcggcctga gcgtggttcg gtatcgccaa
     3061 ggcagctgcc gcgaatgcga gtgagagagc caggtcgagt gcacgtttca ttttcgtctt
     3121 cattgttgtc cttttatctt gcccgggggg tccggcagct cgaatttctt ggttttggga
     3181 tgacatcagg cgccaaccgg tggagcaacg tcgaatccga gtcttacagc atccgactgg
     3241 tttgcccgaa gccagatttt cgcttcgaag aaccatccca agtttcttgc acaggccact
     3301 ataccttcac ggacctatac caggaaagcg cttactgcac cgcagatatc cagcagaatt
     3361 cgccgcgtcg accgtgggac ggtacc
//
LOCUS       DATAVD010000709         2371 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_68624, whole genome shotgun sequence.
ACCESSION   DATAVD010000709 DATAVD010000000
VERSION     DATAVD010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68624"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1029
                     /locus_tag="VHX39_13290"
     CDS             <1..1029
                     /locus_tag="VHX39_13290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992140.1"
                     /translation="RHIWPGAIVGENTLQVHISAIRKALGSRRTMLKTESGRGYRMLG
                     SWRARPDNMLATLVNPAPMRTATQTARGNLPIAASDLIGRDAVLGNVRDLLSAYRIVT
                     LTGAGGIGKTALGYAAARLASPEFGGDVWVIELATLSDSGLVSVTIASVLGLDLASAS
                     SPEALARVIGARKLLLVFDNCEHVIDAAANVAETVIRLCPNTSVLATSREFLRVEGEC
                     AYRVPPLEFPLRQSAEKLSEPDQDHVLEHSAVQLFIARMTERQPDMQHQEDLPAIAAI
                     CRRLDGIPLAIEFAAARAAVLGVNQVLSRLDDRFNLLTSGRRTALPKHQTLRATAVLV
                     PPGDHLVP"
     gene            complement(1014..1643)
                     /gene="upp"
                     /locus_tag="VHX39_13295"
     CDS             complement(1014..1643)
                     /gene="upp"
                     /locus_tag="VHX39_13295"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEX3992141.1"
                     /translation="MHPVTIPDHPLLRHKLTLLRDRYTPTGMFRQVAREISLLMAYEV
                     MRDLPLEPIDIETPLEPMRAEHLAGKKLCLVSILRAGNVILDGMLDLVPSARVGHIGL
                     YRDPETLRPVEYYLKLPGDISERLVILVDPMLATGYSAVAAASRLKQAGVTAMKFVCL
                     IAAPEGIAVFTGAHPDVPVFTAAIDRELDSHSYIRPGLGDAGDRFYGTR"
     gene            complement(1665..>2371)
                     /locus_tag="VHX39_13300"
     CDS             complement(1665..>2371)
                     /locus_tag="VHX39_13300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX3992142.1"
                     /translation="QGPDGGLTFPMNGFSFHWFRRLFETQAVGDFGGSLARSFALATM
                     VMATTVVVSLAAGMAFRRRFLGSGPLFTLSVASLIIPSILVSLGVGLLFNELDLDPDW
                     YSSAFGAQLTWTLPFGLLIMFAVFNRFNRAWEEAARDQGATPWQSFWHVVLPIIAPSV
                     IGIALFGFTLSYDEFARTLLTAGSDNTLPLEIFGMTTSVTTPVLYALGTLTTAFSFVV
                     ILCTLAIVRLLAAARA"
BASE COUNT          490 a          748 c          734 g          399 t
ORIGIN      
        1 cgccatatct ggccaggcgc catcgtcggc gagaatactc tccaggttca tatctcagcg
       61 atccgaaagg cgctcggatc gcgtcggacc atgctgaaga cggaatccgg ccgcggctat
      121 cgcatgctcg gcagctggag agccaggccg gacaacatgc tcgccactct ggtcaatccc
      181 gcgcccatgc gcacggcgac ccagacggca cgaggtaact tgccgatcgc ggcgtccgac
      241 ctgataggcc gggacgcggt cctgggaaat gtgcgggatc tgttatcagc ctatcggatc
      301 gttacgctga ccggagcggg aggaatcggg aagacagccc tgggctacgc ggccgcccga
      361 ctcgcgtcgc cggagtttgg cggcgacgtt tgggtcatcg aactcgcgac gctgtcggat
      421 tcggggttgg tttctgtcac catcgccagc gtgctcgggc tcgacctcgc gagcgcgtct
      481 tcgcccgagg ctctggcgcg cgtcatcggc gcccgcaagc ttctccttgt gttcgacaat
      541 tgcgagcatg tcatcgacgc cgccgccaac gtcgcggaga cggtgatacg gctgtgccca
      601 aacacgtccg tcctcgcgac gagccgagaa ttcctccgcg tcgaaggcga atgtgcgtac
      661 cgcgtcccgc cgctggaatt ccccctgcgc caatcggccg agaaactatc ggagcccgat
      721 caggaccatg tcctggaaca cagtgcggtg caacttttca tcgccagaat gaccgagcgg
      781 cagcctgaca tgcagcatca ggaagacctg ccagccatag ccgcaatttg ccgacgcctc
      841 gacggcattc ccctcgccat cgagtttgcc gccgcacgtg ccgcggtact gggcgtcaat
      901 caggtgcttt cccgactgga cgatcgtttc aacctgctga ccagcggccg ccggacggcg
      961 ctgccgaaac atcagacgtt acgggcaacc gccgtcttgg taccgccagg cgatcacctg
     1021 gtcccgtaaa acctgtctcc cgcgtcgccc agtcccgggc ggatgtaact gtggctgtcc
     1081 agttcgcggt cgatcgcagc ggtaaacacc ggcacgtcgg gatgcgctcc ggtaaagacg
     1141 gcgatgcctt ccggcgcggc aatcaaacaa acgaacttca tcgcggtgac gccggcctgc
     1201 ttcaggcggg acgcggcagc cactgccgaa taaccggtcg ccagcattgg gtccaccaag
     1261 atgaccagcc gctccgagat atcacctggc agcttcaggt aatattcgac gggccgcagg
     1321 gtctccggat cgcgatacag gcctatatgg ccgacccggg cggaaggaac cagatccagc
     1381 atcccgtcca gaatgacgtt gccggctcgc aggatggaca cgaggcacag ctttttgccg
     1441 gccaaatgct cggcacgcat cggttcgaga ggcgtttcga tgtcgatcgg ttccaacggc
     1501 aggtcgcgca tgacctcgta agccatcagc aggctgatct cgcgggcaac ctggcgaaac
     1561 atgcctgtag gcgtatagcg atcgcgcagc agggttagct tgtgacgcag cagcgggtgg
     1621 tcaggtatgg tcacgggatg cattgcggtt cctccttacc gttgtcaggc gcgcgcggca
     1681 gcgagcagcc tgacgatcgc cagcgtacag aggataacca caaacgaaaa cgctgtggtt
     1741 aacgtgccca gagcatacaa cacgggagtg gtcacgctgg tggtcatgcc gaagatttcc
     1801 agcggcaaag tattgtcgct gccggcagtc agcagcgtgc gggcgaactc gtcataggac
     1861 agggtaaagc caaacaatgc gataccgatc acacttgggg cgatgatcgg cagcacgaca
     1921 tgccaaaagg attgccaggg ggtcgcgcct tgatcgcgcg ccgcttcctc ccaggcgcga
     1981 ttgaaccgat tgaacaccgc gaacatgatc aacagcccga acggcagcgt ccaggtcagc
     2041 tgcgcgccaa atgcggaact gtaccaatcc ggatcgagat cgagttcgtt gaacaacagt
     2101 ccgacgccca ggctgaccag gatcgagggg atgatcaggc tggcgacgct cagggtgaat
     2161 aatggaccgg agcccaggaa gcggcgacgg aacgccatgc cggccgcgag cgacacaacc
     2221 accgtggtcg ccatcaccat cgttgccagc gcgaacgaac gcgccaaaga gccaccgaag
     2281 tcgccgaccg cctgggtttc gaacagtcgc cggaaccagt ggaacgaaaa tccgttcatt
     2341 gggaaggtca gccctccgtc cgggccctgg a
//
LOCUS       DATAVD010000710         3410 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1183895, whole genome shotgun sequence.
ACCESSION   DATAVD010000710 DATAVD010000000
VERSION     DATAVD010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3410
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1183895"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            256..1068
                     /locus_tag="VHX39_13305"
     CDS             256..1068
                     /locus_tag="VHX39_13305"
                     /inference="COORDINATES: protein motif:HMM:NF013232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside phosphorylase"
                     /protein_id="HEX3992143.1"
                     /translation="MDDRSLRLVPPILRHKHYTAPSAFTPESLLRESRRQKEVPDTPV
                     PHICILDPDGDIVRFLRAAGGARPEAGWACYHSTMDRFDNGGREYGIVGCAVGASYAV
                     LVAEQLFASGCRLLVSITSSGQVATLGPPPYFILIERALRDEGTSYHYLPAGPEYVEA
                     DPALLSIAEDALATINTPVERGATWTTDAPYRETVDAIAAARADGILAVEMEAAALYA
                     FAEARRKPVLCFAHVTNQMGQSGDFEKGEANGATASLALVRAVTKAYLDALT"
     gene            1206..1601
                     /locus_tag="VHX39_13310"
     CDS             1206..1601
                     /locus_tag="VHX39_13310"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEX3992144.1"
                     /translation="MKTPAILAGLALTIDIGAAGVAHAATVQPYEQSAFEAAEKSGQP
                     ILIFVEAPWCPTCAKERPILQQFYATSEFANLKVFDVDFDISKPLLRQLGVQMQSTLI
                     VYHGTKETGRMTGATDPAVIKRLLETSAS"
     gene            1605..2327
                     /locus_tag="VHX39_13315"
     CDS             1605..2327
                     /locus_tag="VHX39_13315"
                     /inference="COORDINATES: protein motif:HMM:NF014713.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis CcdA family protein"
                     /protein_id="HEX3992145.1"
                     /translation="MPIASIGAGLLAGILSTLSPCVFPLLPLVIGAATSAHRSGGYWL
                     AGGVATSFTIAGLFIATIGFAIGLDGDLFRGISAAFLVLLGFALFSMTIQVRLGVVAG
                     GLSAAGDRIMRHLSLTSATGQFLVGALLGLVWSPCVGPTLGAASMLAAQRKDLGSVAA
                     VMFAFGAGTMLPMLAVAVLSRTALLRWRQRMISAGHFGKVAMGLSAIAVGAMILTGVD
                     RQVETTLVSVAPAWLTDLTTQF"
     gene            2445..3047
                     /locus_tag="VHX39_13320"
     CDS             2445..3047
                     /locus_tag="VHX39_13320"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEX3992146.1"
                     /translation="MSLSRIDRYTPLAQALHWITAVMMLAIVILAWVFMSEPAETADR
                     FTYITLHKSLGQTIFFLAVFRLVWRELHPPPAMDGRITRWEFVAARCNHWVLYAIMLV
                     MPSSGYILATAAARPSPYFWLFYWPQRALIPAIAHAALRVHLAGQYAVYAFVGLHVLA
                     SVWHVTVRRDAVLERMLPPQRDDTSGNARACVCLKGDRPQ"
     gene            3044..>3410
                     /locus_tag="VHX39_13325"
     CDS             3044..>3410
                     /locus_tag="VHX39_13325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992147.1"
                     /translation="MTQTLSADVIQRPSVAATRASPIEKGWMAVLAPPLSPSPKWAFS
                     VKRHHYIILALFAALCIIPPVTAHVADNGLVTKLSNHSVKETVERFERAVMAKETHGW
                     IVVTEIDHAGAASKEGLTLA"
BASE COUNT          582 a         1053 c         1050 g          725 t
ORIGIN      
        1 aagacgatcc atctgcaggt gccctacccg cccggacaag atgtcgctgt catcctgcag
       61 cgagatgacg gtcatatcgt gggcgccgcg gtttcgcatg cgggctctcc cccgttatga
      121 atccgtggcg tggtggaatt cccaccccac accgtgcact cgcgtgtcgc tgttggcact
      181 cacgcgttcc tttccgtcgg acgattccgg cggtctgcca tacccgtttc gcggccggac
      241 catctgacca tgcgcatgga tgatagaagc ctccgtcttg tgccgccgat cctgcgccac
      301 aagcactaca ccgctccctc ggccttcacg cccgagagct tgttgcgaga gtcccgtcgt
      361 caaaaggaag tgccggacac accggttcct cacatctgca tcctcgatcc ggacggcgac
      421 attgtgcgct tcctgcgcgc cgcaggcggt gcgcggcctg aagcaggctg ggcctgttat
      481 catagcacga tggatcgctt cgataacggc ggcagggaat acgggatcgt cggttgcgcc
      541 gtcggagcgt cgtacgctgt gctggtggcg gagcagctat tcgcctccgg ttgccgtctg
      601 cttgtcagca tcacctcgtc aggccaggtc gccacgcttg gaccaccccc ttacttcatc
      661 ctgatcgagc gggctctccg cgacgagggc accagctatc actatctgcc cgcgggtccc
      721 gaatacgttg aggccgaccc ggcgctgctg tcgatcgccg aggatgcgtt ggccacgatc
      781 aacacgccgg tcgagcgcgg tgcgacctgg acaaccgatg cgccctatcg cgagacggtc
      841 gatgccatcg ctgcagcgcg ggccgacggc attttggctg tcgagatgga ggcggccgcc
      901 ctttacgctt tcgcggaggc acgccgtaag cccgtgctct gcttcgcaca tgttaccaat
      961 cagatgggtc aatccgggga cttcgagaaa ggggaggcca atggtgcgac agcgtcgctg
     1021 gccctcgttc gagccgtcac caaggcgtac ctggacgcgc tgacttgaag ttctcccctt
     1081 tcaactcgaa tcgatcctgg cagcactcaa gccctgcaca gatcgatgcc cgagacggca
     1141 agccgttcgg ccatcggcgg gtgcgtgccg tgacatcact attcatcttg aggagaatcc
     1201 acgccatgaa gacaccggca attcttgcgg gccttgccct gacaatagac atcggagccg
     1261 ctggcgtcgc gcatgctgcg acggttcagc cctatgaaca atccgccttc gaagcagcgg
     1321 agaagagcgg ccagccgatc ctcatcttcg tcgaggcgcc ctggtgcccg acatgcgcga
     1381 aggagcggcc aattctccag cagttctacg cgacgtcgga gttcgccaat ctcaaggtct
     1441 tcgatgtcga cttcgacatc agcaaaccgc ttctgcgcca gttgggtgtg caaatgcaaa
     1501 gcaccctgat cgtctatcac ggtaccaagg aaactggcag gatgactggc gccaccgatc
     1561 cggcggttat caagcggctg cttgaaacct ccgcaagttg agtcgtgccg atcgcgagta
     1621 taggcgcggg attgttggcc ggcattctgt cgacgctttc gccgtgcgtc tttcctctcc
     1681 ttccgctcgt catcggtgcc gccacttcgg cgcatcgatc gggtgggtat tggctggcgg
     1741 gaggtgtggc gacgtcgttt acgattgccg gccttttcat cgcgacgatc ggatttgcca
     1801 tcggtcttga tggtgatctc ttccgcggta tatcggcggc tttcttggtg ctgttgggct
     1861 tcgcactgtt cagcatgacg atccaggtcc ggttgggcgt agtggcgggc ggtctcagcg
     1921 ccgcagggga ccgcatcatg cgccacttgt cgctaaccag tgcgaccgga cagtttcttg
     1981 tcggcgctct gctcggcctg gtatggagcc cgtgtgttgg cccgacgctc ggggccgcgt
     2041 cgatgctggc ggcgcagcgg aaggatctgg ggagcgtcgc cgctgtcatg ttcgcgttcg
     2101 gtgcgggcac gatgctgccc atgttggcgg ttgccgttct ctcccggacg gctctgttgc
     2161 gctggcgtca gcgcatgatt tccgcggggc atttcggcaa ggttgccatg ggtctgagcg
     2221 ccatcgcggt tggtgcgatg attctgaccg gtgtcgaccg ccaggtggag accaccttgg
     2281 tcagcgtggc gccggcatgg ctaactgatc tgacgacgca gttttaggac gggaccgacc
     2341 actgccatcc ggcaccaaac aagctgtgtg tggcactcac agaccgaata gtcgcggctg
     2401 gccggcgttt tcaggttgag tgacaatcgc tgggaggatg gtcgatgagc ctaagccgaa
     2461 ttgaccgata tacgccactg gcccaggcgt tgcactggat cacagcggtg atgatgctgg
     2521 caatagtcat cctggcatgg gtgttcatgt ccgagcccgc cgaaacggcc gaccgtttca
     2581 cctacattac gctgcacaaa tcgcttggac agacgatctt cttcctggct gtgttcaggc
     2641 tggtctggcg agagttgcac ccaccgcctg cgatggatgg caggatcacc cgctgggaat
     2701 ttgttgctgc gcgctgcaac cactgggtgc tctacgccat catgctggtc atgccgagca
     2761 gcggctatat cctggcgacc gcggcggccc ggccatctcc ctacttttgg ctgttctact
     2821 ggccgcagcg ggcgctgata ccggctatcg cccacgccgc ccttcgcgtc caccttgccg
     2881 gtcagtatgc ggtgtatgcg ttcgttggac tccatgtgct cgcctcggtt tggcacgtta
     2941 ccgttcgacg cgacgcggta ctggagcgga tgctgccgcc gcaacgcgac gacacatccg
     3001 gaaatgcgag agcgtgcgtg tgcctgaaag gggatcgccc gcaatgacgc aaacattgtc
     3061 ggccgacgtc attcagcggc cttctgtcgc cgcgactcga gcgagcccga ttgaaaaggg
     3121 ctggatggcc gtgcttgcgc cgccgctctc cccctcgcca aaatgggcct tctcagtgaa
     3181 acgccaccac tacatcatac ttgctttgtt cgcggctctt tgcatcattc cgccagtcac
     3241 cgctcatgtt gccgataacg gactggtaac aaagctgagc aatcattcgg ttaaggagac
     3301 ggttgagcgc tttgagcggg cggtaatggc gaaggaaacc cacggctgga tcgtcgtcac
     3361 cgaaatcgat catgccggcg ccgcgagcaa agaagggctt actttggcgg
//
LOCUS       DATAVD010000711         3509 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1183904, whole genome shotgun sequence.
ACCESSION   DATAVD010000711 DATAVD010000000
VERSION     DATAVD010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3509
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1183904"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1188)
                     /gene="tcuA"
                     /locus_tag="VHX39_13330"
     CDS             complement(<1..1188)
                     /gene="tcuA"
                     /locus_tag="VHX39_13330"
                     /inference="COORDINATES: protein motif:HMM:NF006130.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent tricarballylate dehydrogenase
                     TcuA"
                     /protein_id="HEX3992148.1"
                     /translation="MLDYKPVDVLVIGAGNAAANAALAAHEAGASVAMLETAPQESRA
                     GNSAFTGGAFRFVYDGIDELLKLDPTIADLDLKNIDFGTYTTEQYFDDMGRLTDYRCD
                     PDLTEVLIGGSYQSALWLKQHGVKFQPALGRQAFKVDGKFKFWGGLACHIHGGGLHLV
                     AALHAALEKARIPVHYDTTAYQLLTDDGRIRGVKARQNGRSYDLRAKSVVLACGGFES
                     NAEMRARYIGPNWDLAKVRGTRFNNGYGHRMAMDIGAASAGHWSGAHAVQWDMNAPPY
                     GDISIGDRFQKHNYPFGVILNARGERFLDEGLDFHSYTYAKYGHEVMKQPGLFAWQVF
                     DQKIVGLLREEYRIARITKETAGTLEDLVTKLTGVDPAAALATLKAYNAAPRPDVPFN
                     PNIH"
     gene            complement(1320..1943)
                     /locus_tag="VHX39_13335"
     CDS             complement(1320..1943)
                     /locus_tag="VHX39_13335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992149.1"
                     /translation="MVQAIKDWLGIIREVMIIVAVAMILIFPTQVGAWLFARGVQKIE
                     IGGATVSLAQFNQTREALNAVQDAQNAAPAQKAQQLQTVATKLQAALVDQVESLSRSG
                     TAGLPTTGWIYLGTLNEGKTDWKPKISKDVASPWPIKLEDIVVLSVNTNLRSDSTSEL
                     RPTAPILSALPLGTKVRVLSLDTDRKVADDSPDHPGYRAWAKVEVVH"
     gene            complement(1960..2841)
                     /locus_tag="VHX39_13340"
     CDS             complement(1960..2841)
                     /locus_tag="VHX39_13340"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEX3992150.1"
                     /translation="MIHSHAQWGPTDQIGAGNLLTVEKRLAALASVRQGRIYDVSHEI
                     YMGAPYMAPNQTPFLMSIFGSWRDTIKRRRKMGATNDAGTNLERIEMTAHVGTHIDAL
                     GHFSKGDMLYNGNACADVVTDWGLDRLGIEHAPPMVTRAVLFDVGGASHLSPGQTVTP
                     DDLKRAADAGGFAVEPGDIALIRTGWGRHFGVDNTRYVEGEPGIDVPAAKWLIDQGIV
                     AIGADNMAVEVLPNPNKSVMMPVHQFALAECGVYLIENLALEELAAARVYAACFILLA
                     TKIRGATGAPVRPIVMV"
     gene            2927..>3509
                     /locus_tag="VHX39_13345"
     CDS             2927..>3509
                     /locus_tag="VHX39_13345"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992151.1"
                     /translation="MSDLKPLSNVRLWLLLAAAFGTFAIGAGFMHAYTVFLVTFIDAF
                     GWTRAEVSLAYSVSQMVTGISSPLVGWLVDRLGPPRLVLMGGALLTVGLLANAWATQL
                     WHIVVLYGVVMTLGANCLGLVVFVPLLSRYFVRNRGMAVSVVQSANGFARAFSAPVTT
                     LMISGLGWRGAYLWQGIFMGVILLPLASLFRGVN"
BASE COUNT          566 a         1112 c         1108 g          723 t
ORIGIN      
        1 atggatattg ggattgaacg gcacatcggg ccggggcgcg gcgttatacg ccttcaacgt
       61 tgccagggcc gcggcgggat ccacgccggt cagtttggta accaggtcct ccagcgtgcc
      121 ggcggtttcc ttggtgatgc gggcgatgcg gtattcctcc cgcagcaggc cgacgatttt
      181 ctggtcgaac acctgccagg cgaacagacc gggctgcttc attacctcat ggccgtattt
      241 cgcgtaggtg tagctgtgga aatccagccc ctcgtccagg aatcgctcgc cgcgtgcgtt
      301 caggatcacg ccgaacggat aattgtgctt ttggaaacga tcgccgatgg aaatgtcgcc
      361 atagggtggt gcgttcatat cccattgcac cgcatgcgcg ccggaccagt ggccggccga
      421 ggcggcgccg atgtccatcg ccatgcggtg gccatagccg ttgttgaagc gtgtgccccg
      481 gactttcgcc aggtcccagt tcggtccgat atagcgggct cgcatctcgg cgttggattc
      541 gaaaccaccg caggccagga cgacggattt cgcgcgcagg tcgtaggacc ggccgttctg
      601 ccgagccttc acgccccgga tgcggccgtc atcggtcagc aactgatatg cggtcgtgtc
      661 gtagtggacg ggaatacgcg ctttctccag cgccgcatgc agtgccgcca ccagatgcag
      721 gccgccgcca tggatgtggc acgccagccc gccccagaac ttgaatttcc cgtctacctt
      781 gaaggcctgg cggcctagcg cgggctggaa tttgacgccg tgctgcttga gccacagcgc
      841 tgattgatag gacccgccga tcagcacctc ggtcaggtcg gggtcgcagc ggtagtccgt
      901 cagccgcccc atgtcgtcga aatattgttc ggtcgtatag gtaccgaagt cgatgttctt
      961 caaatcgaga tcggcgatgg tgggatccag cttcagcagt tcgtcgatac cgtcgtacac
     1021 gaagcgaaaa gccccgccgg taaacgccga gttcccggct cgcgattctt gcggcgcagt
     1081 ttccagcatt gccacggacg ccccggcttc gtgtgcggcg agcgcggcgt tggccgcggc
     1141 attgcccgcc ccgatcacca gaacatcaac gggtttgtag tcgagcatgg ccgggttctc
     1201 cgtgttatgg ccagtggctc aaatcagact gatagtgccg tccgatttga gccattagcc
     1261 cttgattttg tgggccgatt cacccggccg catgggatgc ctctgtcggg atcggaccac
     1321 tagtggacga cctcgacttt ggcccaggcg cgatatccgg gatggtcggg gctgtcgtcg
     1381 gcgactttgc ggtcggtatc gaggctgagg acacggacct tggttcccag cggcagggcc
     1441 gagagaatgg gcgcggtcgg gcgtagttcg gaagtcgaat ccgatcgtaa attcgtattg
     1501 accgaaagta ccacgatgtc ttcgagtttg atcggccagg ggctggcaac gtccttgctg
     1561 attttgggtt tccagtcggt cttcccctca ttcagcgtgc cgaggtagat ccatcccgtg
     1621 gtcggtagac cggcggtgcc ggagcgcgac aggctctcga cctgatcaac gagcgcggct
     1681 tgcagcttgg tggcgacggt ctgcaattgt tgcgctttct gggcgggcgc ggcgttctgg
     1741 gcgtcctgga cagcgttcag tgcctcacgc gtctggttga actgagcgag ggagacggtg
     1801 gcgccgccga tctcgatctt ctgcacgcct cgggcgaaga gccaggcacc gacctgggtc
     1861 gggaagatca ggatcatcgc caccgcgacg atgatcatca cttcgcggat gatccccagc
     1921 caatccttga ttgcctgaac catggttgcg gcctgtgtgc tacaccatca cgatcggacg
     1981 caccggcgcg cccgtcgccc cccggatctt ggttgccagc agaatgaagc acgcggcata
     2041 gacccgcgcc gcggcgagtt cctccagcgc cagattctcg atcagataga cgccacactc
     2101 ggccagggcg aactgatgca ccggcatcat gacgcttttg ttggggttcg gcagcacttc
     2161 gacagccatg ttgtcggcgc cgatcgcaac gataccctgg tcgatcagcc atttcgccgc
     2221 cggcacgtcg atcccgggct caccttccac atagcgggtg ttgtccaccc cgaaatggcg
     2281 tccccaaccg gtgcggatca gcgcgatatc tcctggctcc acggcgaaac cacccgcatc
     2341 cgccgcccgc ttcaaatcgt ccggcgtcac cgtctgcccc ggcgacaaat gcgacgcccc
     2401 gcccacgtcg aacagcaccg cccgcgtgac catcggcggc gcgtgctcga tccccagccg
     2461 atccaacccc caatccgtca ccacgtccgc acacgcattg ccgttgtaaa gcatgtcgcc
     2521 cttggaaaaa tgccccagcg cgtcgatatg cgtgccgaca tgcgcggtca tctcgatccg
     2581 ttcaagattg gtgccggcat cgttcgtcgc ccccatcttg cggcggcgct tgatggtgtc
     2641 gcgccacgac ccgaagatcg acatcaggaa cggagtctga ttcggcgcca tgtagggcgc
     2701 gcccatgtag atctcgtggc tgacgtcata aatccggccc tgccggaccg atgccagcgc
     2761 ggcgaggcgc ttttccaccg tcagcagatt acccgcgccg atctggtctg ttggccccca
     2821 ttgggcgtgg ctgtggatca tctggacgct ccgtttcctg gttggataca gcgtgccatg
     2881 cgccgcgggg ctgggcaacg cgcccgcggc cagacatggt tgcgtcatgt ccgatctgaa
     2941 accactctcc aacgtccgtc tgtggctgct gctcgccgcc gccttcggca ccttcgccat
     3001 cggtgcgggc ttcatgcacg cctacaccgt cttcctggtc accttcatcg atgcgttcgg
     3061 ctggacccgg gcggaggtct cgctggccta ttcggtgtcg cagatggtga cgggcatcag
     3121 ctcaccactg gtcggttggc tggtggatcg ccttggcccg cccaggctgg tcctgatggg
     3181 cggggcgctg ctgacggtcg ggttgctggc gaacgcctgg gccacccagc tttggcacat
     3241 cgtcgtgctg tatggcgtgg tgatgacgct gggcgccaac tgcctcgggc tggtggtgtt
     3301 cgtccccttg ctgtcgcgct atttcgtccg gaaccgaggc atggcggtat cggtcgtaca
     3361 atcggcgaac ggcttcgccc gggcgttctc ggcgccggtg accacgctga tgatctcggg
     3421 gctgggctgg cgaggagcct atctgtggca gggcatcttc atgggcgtca tcctgctgcc
     3481 gctggcgtcg ctgttccgcg gcgtaaacc
//
LOCUS       DATAVD010000712         3644 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_68708, whole genome shotgun sequence.
ACCESSION   DATAVD010000712 DATAVD010000000
VERSION     DATAVD010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3644
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68708"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1242
                     /locus_tag="VHX39_13350"
     CDS             <1..1242
                     /locus_tag="VHX39_13350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase C-terminal domain-containing
                     protein"
                     /protein_id="HEX3992152.1"
                     /translation="REELLQLQFTTGADTIFDGIQRVLPGETITCADGHILDRRRISW
                     IPEGGPENIDEDAALARLDRALEESVDLHQRSDVPYGMFLSGGVDSATLITLMARLNK
                     EPVRAYTAGFDTPGAADEREHAAAVAQAVGAHHHSIEVTEAMVWQHLPEIVACMDDPA
                     ADYAIIPTWFLARHARQDVKVVLTGEGGDEIFAGYDRYRKAIRPWWRGGRAMWARGSF
                     DKVPVLRVQPAIWRDGMAAAEASALDSGMSRLSAAQATDMADWLPHDLLLKADRCLMA
                     HSVEGRTPFLDKGVAAAAFRLPDAMKVRDGVGKWILRKWLEKNLPMARPFAPKQGFTV
                     PIGEWIKGRGAALGPLVAHQPGVLEIAHPDRVEALFRDIRRWRHGFACWKLLFYALWH
                     RRHILGLQPAGDVFETLAAPG"
     gene            1211..2551
                     /locus_tag="VHX39_13355"
     CDS             1211..2551
                     /locus_tag="VHX39_13355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992153.1"
                     /translation="MFSKRWRHRGSAVERFVAARFVHNGGDLTVVVRNRRLALLAPFQ
                     LRDFRCQFRADMLTSWGIEMEVVILGWYILTATGSVLLLSVYSSLQYSGTLIAPLFGM
                     AGDRFGHRNVMCAMRLCYAVLAALVMVLAFTGSMRPLYVMLIAAVNGLVRPSDLAMRQ
                     ALVADIMPNEQLMAAMGVARTTADSARIFGSLVGASLVALLGIGPAYVGVTLFYGLGL
                     AQTSSISRGKPGAPASTRGGLAFLKEVWEGVTYVRHRPLEMAGIWVAFLVNLLAFPMT
                     SGLLPYVAKQIYHTDQTGLGTLVACFAAGSCTGSLVIGSIGRSLRPARMMLICATLWF
                     AMLLVFVQIANPVAGRMTLVLAGLAQSLSMVPLSTMLLRSAGPKFRGRVMGVRMLAIY
                     GLPVGLLVAGVLIPWMGFRATASAYCVLGLALMALIGMRWRQVIWPLDAIGNQR"
     gene            2568..3311
                     /locus_tag="VHX39_13360"
     CDS             2568..3311
                     /locus_tag="VHX39_13360"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3992154.1"
                     /translation="MLTIDQVGRRFANGVEALRGVSLLLHDGDFLALLGPSGCGKSTL
                     LRLIAGLDRPDSGTLSWAAGAPPGPGDIGYVFQDATLLPWATAEDNVWLPLRLRGFTR
                     DAAADEVAAVLRRVGLNGFETVRPAQLSGGMRMRVSIARALVTRPRLLLMDEPFAALD
                     EFTRHRLQEDLLALWRDIGCTVVFVTHSIYEAAFLARRIVLMTPRPGRIAAEIASSLP
                     QTADTRLDPAYAALVASVSHRMTALLDAT"
     gene            3308..>3644
                     /locus_tag="VHX39_13365"
     CDS             3308..>3644
                     /locus_tag="VHX39_13365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3992155.1"
                     /translation="MKQPLSPRQLAIRAFLHRPVAVAGLAIIVLFVAVAVLAPDIAPY
                     DPIATSWTAIRKAPSAAHWMGTDENGRDVLSRIAYGARASLLAGVVSVLIAAGIGVPS
                     GLLAGLSGPW"
BASE COUNT          559 a         1035 c         1280 g          770 t
ORIGIN      
        1 cgcgaggaat tgttgcaact tcaattcacc accggggccg atacaatttt cgacgggatc
       61 caacgggtgc tgccgggcga gacgattacc tgcgccgacg gtcacattct cgatcgccgc
      121 cggatttcct ggatccccga gggcgggccg gaaaacatcg atgaggatgc ggcgctggca
      181 cggcttgacc gggcattgga ggaaagcgtc gatctccatc aacgcagcga cgtgccctat
      241 ggcatgttcc tctcgggcgg ggtcgacagc gcaactttga ttacgctgat ggcacgactg
      301 aataaggagc cggtgcgggc ctatacggcc ggtttcgata cgcccggtgc cgccgatgaa
      361 cgcgagcatg cggccgctgt ggcacaagcc gttggtgcgc accatcattc gatcgaagtc
      421 accgaagcga tggtctggca gcatctgccg gagatcgttg cctgtatgga tgatcccgct
      481 gccgattacg caatcattcc gacctggttc ctggcgcgcc atgcccgtca ggacgtgaaa
      541 gtggtgctga ccggagaagg cggcgacgaa atttttgccg gttatgaccg gtatcgcaaa
      601 gcgatcaggc cgtggtggcg tggcggacgc gcgatgtggg cgcgcggcag cttcgacaaa
      661 gtgccggtgc tgcgcgtgca acccgcgatt tggcgtgacg ggatggcggc ggcggaggca
      721 agcgcactgg acagcgggat gtcccggctg tcggctgctc aggcaaccga tatggcggac
      781 tggctgccgc acgatctttt gctcaaggcc gaccgctgcc tgatggccca ttcggtggag
      841 ggacgcacgc cgttcctcga taagggcgtg gcggcggcgg cgtttcggct gccggacgcg
      901 atgaaggtcc gcgacggggt cggtaaatgg attcttcgga aatggctgga gaagaatctg
      961 ccgatggcac ggccgttcgc accgaagcaa ggcttcaccg ttccgattgg agaatggatc
     1021 aagggacgcg gcgcggcact tggcccgctg gtggcacacc agcccggggt gcttgaaatc
     1081 gcacatcccg atcgggtgga ggcgttgttc cgtgacatca ggcgctggcg gcacggtttc
     1141 gcctgctgga agttgctgtt ttacgcgttg tggcatcgcc ggcacatctt gggactgcag
     1201 cccgccggcg atgttttcga aacgctggcg gcaccggggt agtgccgttg agcgatttgt
     1261 tgcggcgcgt ttcgttcata acggcggcga tttgacggtg gtggtcagga accgccgcct
     1321 ggcgctgctc gcgccattcc agttgcgcga tttccgctgt cagttccgcg ccgacatgct
     1381 gacctcctgg ggcatcgaga tggaggtcgt gatccttggc tggtacatcc tgaccgcgac
     1441 aggatcggtt ctgctgctga gcgtttacag ctcattgcaa tattccggca cgctgatcgc
     1501 gccgttgttc ggcatggcgg gcgatcggtt cggccatcgc aacgtcatgt gcgcaatgcg
     1561 gctgtgctac gcagtgttgg ccgcgttggt gatggtattg gcgtttaccg gctcgatgcg
     1621 gccgctttac gtcatgctga tcgcagccgt gaacgggttg gtacggccgt cggacctggc
     1681 gatgcgccag gcgctggtcg ccgatatcat gccgaatgag caattgatgg cggcaatggg
     1741 tgtggcgcgc accaccgccg actcggcgcg cattttcggg tccctggtcg gcgcatcgct
     1801 ggtggcattg ttgggaatcg gcccagcgta tgtcggagtg acgctgtttt atggtcttgg
     1861 cctggcgcaa acgagttcga tttcgcgcgg gaaaccaggc gcacctgcca gcacacgcgg
     1921 cggcctggcg ttcctgaaag aggtgtggga gggcgtgacc tacgtcaggc accggccgct
     1981 cgaaatggcg ggcatttggg tggcgttcct ggtcaatttg ctggcgtttc cgatgaccag
     2041 cggattgctg ccttatgtcg cgaagcaaat ctatcatacc gaccagaccg gtcttggcac
     2101 actggtggcc tgctttgccg ctggctcctg cacaggctcg ctggtgatcg gttcgatcgg
     2161 acgatcgctg cggccggccc ggatgatgct gatctgcgct acgctgtggt tcgcgatgct
     2221 gctggtattt gtgcagatcg ccaacccggt ggctggcagg atgacgttgg tgctggccgg
     2281 ccttgcgcag agcctcagca tggtgccgct gtcgaccatg ctgctgcgca gtgccggacc
     2341 aaagtttcgc ggccgggtca tgggtgtgcg aatgttggca atctatggtt tgccagttgg
     2401 tctgttggtt gccggagtgc tgatcccctg gatgggattt cgcgccacgg cgtcagccta
     2461 ttgtgttctg gggctggcgc tgatggcgct gatcggcatg cggtggcgcc aggtgatctg
     2521 gccgctcgat gcgattggga accaaagatg atgtcattgg ccggccaatg ctgacgatcg
     2581 accaggtggg ccgccggttc gcgaacgggg tcgaggcatt gcgtggcgtc tcgctgctgc
     2641 tgcacgacgg ggatttcctg gcactgctgg ggccgtccgg ctgcggcaag tcgaccctgt
     2701 tgcgtttgat tgcgggcctg gatcgaccgg atagcggaac gttgtcgtgg gctgccggag
     2761 caccgccagg ccccggagac attggctacg tatttcagga cgcaacgctg ctgccctggg
     2821 cgacggccga ggacaatgtc tggctgccgt tgcgcctgcg cgggttcacc cgggatgcgg
     2881 ccgccgatga ggtcgcggca gtgctgcgca gggtcggttt gaatgggttc gaaaccgtgc
     2941 ggccggcaca gctctcgggc gggatgcgga tgcgcgtgtc gatcgcccgg gctttggtca
     3001 cccgcccgcg tttgctgctg atggacgaac cgttcgccgc actggacgag ttcacccggc
     3061 accgcttgca ggaagatttg ttggcgctgt ggcgcgacat tggctgcacc gtggtgttcg
     3121 taacgcattc gatttatgag gcggcgtttc tggctcgccg gattgtgctg atgacgccgc
     3181 ggccgggacg gattgccgcg gaaatcgctt catcattgcc gcagacggcg gacacgcggc
     3241 ttgatcccgc ttatgctgcg ctggtggcat cggtatcaca ccggatgacg gcgttattgg
     3301 acgcgacatg aagcagccgc tcagcccgcg ccaacttgcg atccgggcgt tcttgcatcg
     3361 gccggtggcg gttgcgggcc tggcgatcat tgtcctgttc gttgcagtgg cggtgttggc
     3421 accggacatc gctccgtacg acccgattgc cacgtcgtgg accgccattc gcaaggcgcc
     3481 atcagcagcc cactggatgg gcaccgacga gaacggccgc gacgtgctgt cgcgcatcgc
     3541 ctatggcgcg cgggcaagcc tgctggcggg cgtcgtttcg gtgttgatcg ctgccggaat
     3601 tggcgttcca tcgggtctgc tcgctgggct gtccgggccc tggg
//
LOCUS       DATAVD010000713         1752 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1369228, whole genome shotgun sequence.
ACCESSION   DATAVD010000713 DATAVD010000000
VERSION     DATAVD010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1369228"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(90..1163)
                     /locus_tag="VHX39_13370"
     CDS             complement(90..1163)
                     /locus_tag="VHX39_13370"
                     /inference="COORDINATES: protein motif:HMM:NF012730.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005216 - monoatomic ion channel activity
                     [Evidence IEA];
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-gated ion channel"
                     /protein_id="HEX3992156.1"
                     /translation="MTATAGRNMTKAAYLAVATGVVLMTVLSSDPANNAMHSWVAVLL
                     FACLAFFIFEWVVRLRQAILGHQVVAYLLSMRGMVDAAGAIAVPAALAVGTNPKTAWL
                     LGVLWLLKVIPGIPGLRQLRRVLVQESGPLLSVLVIFLMVLFLASVAVYFLERDVQPA
                     TFGNIPSALWWAVATLTTTGYGDVVPITPLGRIAAAFVMICGLGVFGLWTGILATGFA
                     AETRRDNFLKTWESVSKVPFFAALGPAAIADVTHMLRTMDLPARTMIIRKGQAGDCMY
                     FIATGEVEVDLPGKKVRLADGAFFGEMALLGNHLRSANITTTRVSKLLVLDLVDFRVL
                     MARHPDLSATIDAEARRRELENK"
BASE COUNT          362 a          522 c          573 g          295 t
ORIGIN      
        1 ccggttgagg cggatggtgg cgcgcgcgcc ggtgacttcg aagaccggtg tgctggcggt
       61 cgcgtgggct gcggacattt tcgtctccgt tatttgtttt ccagctcgcg ccgtctggcc
      121 tcggcatcga tcgttgcaga cagatcaggg tgccgcgcca tcagcacgcg gaaatcgacg
      181 aggtcgagca ccagcagctt cgacacccgt gtggtggtga tgttggcgga acgcagatgg
      241 ttgccgagca atgccatctc gccaaagaac gcgccgtcgg cgagccggac cttcttgccg
      301 ggcagatcga cctcgacctc gccggtggcg atgaaataca tgcagtcgcc ggcctggccc
      361 ttgcggatga tcatggtgcg cgccggcagg tccatcgttc gaagcatatg cgtgacgtcg
      421 gcgatcgcgg ccgggccgag cgccgcgaag aacggcacct tgctgacgga ttcccaggtc
      481 ttcaggaagt tgtcgcggcg ggtttccgcg gcaaagccgg tggcgagaat accggtccac
      541 agaccgaata cgccgaggcc gcagatcatg acgaatgccg cggcgatccg gccgagcggc
      601 gtgatcggca ccacgtcgcc ataccccgtc gtggtcaggg tcgcgaccgc ccaccacagc
      661 gcggagggga tattgccgaa ggtggcgggc tgcacatcgc gttcgaggaa gtagaccgcg
      721 acggatgcaa gaaacagcac catcaggaag atcaccagca cgctcaacag cggtccggat
      781 tcctgcacca gcacccggcg caattgtcgc agacccggga tgccggggat caccttgagc
      841 agccagagca ccccaagcag ccatgcggtc ttgggattgg tcccgaccgc cagcgcggca
      901 ggcaccgcga tcgcgccggc ggcatccacc attcccctca tcgagagcag ataggccacg
      961 acctgatgtc cgagaatggc ctgacgcagg cgcaccaccc actcgaagat gaagaaagcc
     1021 aggcaggcga acagcagcac ggcgacccag gaatgcatgg cattattggc gggatcgctg
     1081 ctgagcacgg tcatcaggac gacgccggtc gccaccgcga gataggcggc cttggtcatg
     1141 ttgcggccgg ccgttgccgt cacaaattgc gccagggcag ggaaaatcag cggctttgac
     1201 attgaaacgg cgtctgtcgg tgaacgaaaa tgagcgccgg cttttgccgg gcgcgaccgg
     1261 ttccgcaaaa tgcccaagcg gcgggaggcc gtcaacgact gccgggaaac acagttatcg
     1321 gtggggcagg gacaaggcct ctactaggcc tcactcgggg ccacggctca cggttctgga
     1381 ctaaggcttt tggactaaag gcttgggcgt aaggacttga gagtaagggc ttgggagtaa
     1441 aggcttggga atagacgccg cgatacaacg atcaggaaag agcgctgaag cgtcattttg
     1501 gccggcatgg ccgggaattc acgacaaaag gtcgcttttg cccgtatatc atgaggtccg
     1561 gacattatga taatgggcgc actggactga cgcccggctc aattgcctca aaattggttg
     1621 gccacgatgg atacctcaca tctcgcagag cacgccggca ccgcagggac actgttcgcg
     1681 tcggtctttg tcgtcgcgac aaccacgatg cggaccatga tcccgctgcg ggtgttcggc
     1741 atcctcacca ac
//
LOCUS       DATAVD010000714        16685 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_68987, whole genome shotgun sequence.
ACCESSION   DATAVD010000714 DATAVD010000000
VERSION     DATAVD010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 16685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16685
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68987"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /locus_tag="VHX39_13375"
     CDS             <1..185
                     /locus_tag="VHX39_13375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992157.1"
                     /translation="SGPQSPAVSARSFVTQKQPILNHSVPETLGLTLDEGKQMVAATQ
                     AEIVRGQVRTMGERFR"
     gene            333..983
                     /locus_tag="VHX39_13380"
     CDS             333..983
                     /locus_tag="VHX39_13380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992158.1"
                     /translation="MFATGGVAPELAYVTAKFAALASFARVADLLSELLPTSGAANAG
                     TVRNRTMRVVETIAGLAALDAPALEPGAVSHAVIIRLDGGYVRSRHQRPERNFEVIAG
                     SVIDASGTQHRFAFARNGGSADDFARALVRAGGRSGTPPTVLSDGDAGSWDWQRAVLP
                     TATVVLDWFHIAMRFEHVLRAAAGAIPTSAPPTATLKPEPQHESPRHCMLSCLEQA"
     gene            2592..3608
                     /locus_tag="VHX39_13385"
     CDS             2592..3608
                     /locus_tag="VHX39_13385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013641058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3992159.1"
                     /translation="MARNTSLPVRQLGLTDMHITRVGFGSWAVGGDWAVGWGSQDDRD
                     SVAAIRHAVARGVNWIDTAAIYGVGHSEEVVASALSAISLSERPYVFTKCGLISDPAD
                     RSAMPRQVGAPASLRREIEDSLRRLRVERIDLYQMHWPAEDGTPIEVSWQTLLDLKRE
                     GKVGAVGLSNHNTAQLAAAEALGHVDTLQPPFSAIKRDVGAAELPWCNLHGTGVIVYS
                     PMQAGLLSGSFSVARAASLPANDWRSRNADFTGEALTRNLKVAEAMRGVAERHHATVA
                     AVAVAWTLAWPGVTAAIVGARHARQVDGWLSAATLALTTADMAEIGDAIDRSGAGSGP
                     SRPK"
     gene            3699..4106
                     /locus_tag="VHX39_13390"
     CDS             3699..4106
                     /locus_tag="VHX39_13390"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3992160.1"
                     /translation="MATIYPSIRIVSPDEFDSGTAQTAGSERQAAISPELGVVTSMWG
                     GRFEVKPGARTGIHHHGIQQTIAFVLSGVCEVRWGSRGEFSATAKAGDFIHVPAFLPH
                     MEINLSETESFHWVVVRSTATPIVVNLPDEMWA"
     gene            4585..5487
                     /locus_tag="VHX39_13395"
     CDS             4585..5487
                     /locus_tag="VHX39_13395"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3992161.1"
                     /translation="MTWNSFDLNLLVVFDAIIQEKTLTRAGHRLGMSQPAVSHALARL
                     RHMLKDDLFVRTPDGMSPTPRAERMAGPARAALHELQVTLEADEFDAPQASRDFVVAV
                     NNCAARAVIPALVRRIAKLAPSVVLDVRPLGQGNVLDQLDGGEIELALTTLIDGGDRF
                     KCVGLLDDEYAVIVSKDHPMAADLDLSIEDFATLPHIDVTSSGDDTHFVDDVLAEHGL
                     TRVVVAKLPLHSLVSVLVGSRALAVLPRRVAADLVAVCPLTMLPLPIPSPRVSLSMIW
                     HRRLDNHPAHRWLRGTLRDAVTGA"
     gene            5707..6624
                     /gene="rpoH"
                     /locus_tag="VHX39_13400"
     CDS             5707..6624
                     /gene="rpoH"
                     /locus_tag="VHX39_13400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HEX3992162.1"
                     /translation="MAPAILNITPERRLSRYLQEIGKFGVLTPQEELLLARRWRDTQD
                     IEAAHRLVTSHLRLVAKIAMGYRGYGLPVSELISEGNTGMVQAVKRFDPERGFRLATY
                     AIWWIRAAIQEYVLHSWSLVKMGTTSAQKKLFFNLRGLKGQMQAIDGGDLQPEQVARI
                     ADMLDVPENDVVSMNRRLATPDHSLNAPLFLDSEGEWQDWLVDDSENQETSLVEQEEL
                     SGRKTLLAGALKVLNERERHIINERRLKDNPATLEELSEHYHISRERVRQIEVRAFEK
                     LQKAMKAEIAERARSRSQISGPTQTRRAA"
     gene            6663..9017
                     /locus_tag="VHX39_13405"
     CDS             6663..9017
                     /locus_tag="VHX39_13405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015072491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FdhF/YdeP family oxidoreductase"
                     /protein_id="HEX3992163.1"
                     /translation="MSDRPSSSSAGQSGIRVKERQEAAVFEPYESPAGGWGALRATAE
                     ALREQSVVLKGSKALLSMNQPDGFDCPGCAWPDPAHTSSFEFCENGAKAVSFELTKRK
                     VTRDFFAAHSVRNLEQQTDYWLEQQGRLTEPMRYNRATDHYEPIGWDDAFAMIAAHLL
                     ALKDPDRADFYTSGRTSNEAAFLYQLFVRRFGTNNFPDCSNMCHEATSVGLPESIGIG
                     KGTVLLEDFDATDAIFVIGQNPGTNSPRMMTSLRDASRRGVPIVAMNPLLERALERFA
                     APQDPIEMATFSATRIASEYCQVRVGGDVAVLKGMMKLILESHDESVRVGGEPVLDLP
                     FIEQHTTGFDAFADDLRRTSWDAILRVSGVPRAQIDRIAEIYMQSRSVVICYGMGLTQ
                     HRYGTANVQQVANLLMMRGNFGRPGAGICPVRGHSNVQGDRTVGIDEKPSAELLGQIE
                     KVFGFRPPQHHGRSVVDSLQAMIDGQSDVFIALGGNFVAAVPDEKVVKQAMRRLKLTV
                     GINTKLNRGHVVHGQEALILPCLARSDIDLQATGRQSITVEDSMSMVHASSGLVEPPS
                     HDLKSEVSIVCGMARATLPAGEIGWDGFEADYTLIRDKIEAVFPKLFADFNARIGIRG
                     GFHLYNGPRAREWKTATGRANFLICDGVAEDPDVADPAVLYLTTIRSHDQYNTTIYGL
                     DDRYRGVFGGRMVVFMNTDDMAERHIEPDSLVDLESVTDAGDVRRTAAGFKVKPYNIP
                     RGSIAAYYPETNGLLPLSHHDKRSKTPSAKSIPVLVRPMAKAAA"
     gene            9167..10336
                     /locus_tag="VHX39_13410"
     CDS             9167..10336
                     /locus_tag="VHX39_13410"
                     /inference="COORDINATES: protein motif:HMM:NF005750.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent formate dehydrogenase"
                     /protein_id="HEX3992164.1"
                     /translation="MAKVVCVLYEDPTGGHPLVYARDGIPRVELYPDGQTIPSPVAVD
                     FRFGELLGGVTGALGLRSFLEARGHTLIVTADRDGPNSVFDQELPEADIVISQACWPA
                     CLTAERIAKAPKLRLVITAGVGSNHIDLAAAGSRNITVTEITSSASISAAEYAVMLIL
                     SLVHNAMPSSVPGARFDRNIGDYAQRAYDLEGMHVGSVGAGRSGFALLRRLRPFDVRL
                     HYTDPRRLPLAVENELGLTYHPTTAVMVPNCDVVTIHCPLHTETAQLFDTGMIGLMKR
                     GAYLINTAQDGICEPDAVALALETGRLAGYAADTRSTLSPAGTPIHIAGATLAAQARY
                     AAGTREVLESWFAGVSIRDDYLIVDRGTLTAVGRRSYGMDRRAHALPVHGRPTLL"
     gene            10438..11412
                     /locus_tag="VHX39_13415"
     CDS             10438..11412
                     /locus_tag="VHX39_13415"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3992165.1"
                     /translation="MDTPIVRPATQQAGNSSNAAPASIRHIGVVGVGRMGHAFARNLL
                     ADGYQIIAYARDKKRVRDLMSDGARAAERLEDLASCDIIVSSLPDDAALTAVALSPAG
                     LVSILAPGAVHVSMSTVSPALSRRLAEAHAAHGQGFVAAPVLGNPDAARARLLYVLAG
                     GTRDAIERVRPVLQSLGQRVFVIGDDAGAASLVKLAGNTLTAATLESMGEVLALLRKS
                     GIDPHLAYDVFTGSLFDGRVHKVYGAKIVEGQYSPPGMTAPLALKDLRLALAEAEHLA
                     APMPVANLVHDRLATMVARGWAGLDWSALGLLAASEAGLDPEVAARQS"
     gene            11424..11840
                     /locus_tag="VHX39_13420"
     CDS             11424..11840
                     /locus_tag="VHX39_13420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010668607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HEX3992166.1"
                     /translation="MPTAFLILVGCELIGEVLRRVFHLPLPGPVIGMSLLALALTVGG
                     DGQAPGVTDQYSHLTRTANALITNMGLLFVPAGVGVIAEFGVLRQNWLPILVGLLAST
                     VLGLVVTGLVMHRLCRAGKRSRPAPELLATYQEKRG"
     gene            11837..12586
                     /locus_tag="VHX39_13425"
     CDS             11837..12586
                     /locus_tag="VHX39_13425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014415209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HEX3992167.1"
                     /translation="MRSTLQTLWTPLVPSPLLWIAATLLAYGLGQAVQRALRGSPLAN
                     PVLIAILLMTVLLEATGTPYQTYFAGAQFIHFLLGLATVALAVPLARNIGHVGRSIRG
                     TGLALLAGSLTSTLTGVGAVWLLGGSRAVAFSMAPKAVTTPIAMAVAQQAGGVPALTA
                     ALAIAGGIVAAAIGETVLRRLHIDDWRAHGLAAGVAGSGLAAAQVASRDGLAAAFAAV
                     GIGLNGLLTAVIVPIIALLWPIGRGLPRPGV"
     gene            complement(12626..12820)
                     /locus_tag="VHX39_13430"
     CDS             complement(12626..12820)
                     /locus_tag="VHX39_13430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992168.1"
                     /translation="MKNLILAAFAALSLIAAIAPMANAALPGSPKVSYHTGPFSVSPA
                     DAGSAIVIRFVSVHSIEART"
     gene            13248..14420
                     /locus_tag="VHX39_13435"
     CDS             13248..14420
                     /locus_tag="VHX39_13435"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX3992169.1"
                     /translation="MKKHVAIIGLCAVIAAGAGGVAAQQVQGAKPAPRPQTSVPAIPV
                     VAEKVKTADTPLVMSGIGSVEAYNVVNVRAQVTGTIDKIGFVEGQTVHPGSLIAQLDP
                     RPYQAALQQAEANLARDQANLTNAQTDLGRYVPLARQGYAAAQQVADQTSVVNQLQAT
                     VLSDRAAIFNAQTQLGYTTIDSPIDGVTGIRHVDIGNILQPASTTPIVTITQVQPISV
                     VFTLPQKDVPAVQAAMAKGPLQTIAYGQDDRTELGQGTLLMVDNTINQSSGTVQLKAT
                     FPNAKKALWPGEFVNVRLTVAVRHDGISVPLSALQQGQTGDLVYVVQPDGVVRERPVA
                     VAQTLNGRALIDHGLTAGETVVTAGQYRLSDGVKVSEVSANDPQVQNSTEASAGML"
     gene            14420..>16685
                     /locus_tag="VHX39_13440"
     CDS             14420..>16685
                     /locus_tag="VHX39_13440"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3992170.1"
                     /translation="MNIAAPFIKQPIATALLMVAIVLLGGTGYRLLPVASLPNVAFPT
                     ISVTAQMAGTDPETMASSVATPLEKQFGQIPYLTQMTSTSSMGYTQITLQFALSDSIA
                     SAAQLVQTAINAAAGQLPKDMPTPPTYHETNPADAPILVLGVTSDTLPITTVDDYAES
                     ILEQKLSQVPGVGLVNIGGEQHPAIRIQFNPAQLAANGLDLENVRTALTNVSVDQPKG
                     SLYGPARSNTLQTNDQILTPAEWDNQIIAYRNGGPVRVSDVGKAIVGPQDSTLKGWVN
                     LHRGIIIAIQRLPGANVISTVQAIKAALPQLEKSIPPTIKIAVIADRTTTIRASVADV
                     QSTLILTIGLVVGVIFLFLRSVWATLIPAVAVPISIIGTFGVMYVFGYSLDNLSLMGL
                     SIAVGFVVDDAIVMVENVARHIEMGKTPMQAALDGAGEIGFTILSISISLIAVFIPLL
                     LMSGMVGRMFQEFAVTVTVAIAVSALVSLTLTPMMAARLLRHEHPEQQGRLSRGLERC
                     FDALLAVYERGLVVALRHRFVTLMVMLGTVLLTGWLFVIIPKGFFPEQDTGLILGVTE
                     AAEDISPTGMTAVQQQVIRVVLKDPAVATVGAYIGAGGATSTENQGRIFITLKPEAQR
                     PSMSTVMARLDQAMHAVPGVHLFMQPVQDVNIGGRLTATQYQYTLSDVDFSELNQWAP
                     RIQAALAKVPQIIDLTSDQQSAAPQLTLAINRDVASRLGITAADIDSVLYDAFGQRQI
                     SQLYTSLNQYYVIME"
BASE COUNT         3194 a         5136 c         5155 g         3200 t
ORIGIN      
        1 gatccggccc acaaagcccg gctgtttccg cgcgctcgtt tgtcacccaa aaacagccga
       61 ttctgaacca ctccgtcccg gaaactctcg gtctgacgct ggatgagggc aagcagatgg
      121 tggcggccac ccaggcggag attgtccgtg gccaggtgcg tacgatgggc gagcggttcc
      181 gatgatgcga gcattgcggg acgaagctgc taagcaaggg atgctacccc gcgaccttcc
      241 gctccgtgtt cggtgacgtg ggtgtcaggg tccgtcgtct gcgtgcttgt ggctgccccg
      301 cagggcagct agagccaaag agttgcgcag ccatgttcgc cactggtggt gtcgcgccag
      361 aactggccta tgtcacggca aagttcgccg cgctcgcgtc gttcgctcgg gtcgcggatt
      421 tgttgtccga acttctccct accagtggtg cggcgaacgc gggcacggtg cgaaaccgca
      481 ccatgcgcgt cgttgagaca atagcggggc tcgcggctct ggatgcgccg gcgctggagc
      541 ccggcgcggt ctcacacgcg gtgattatca ggttggacgg cggttacgtg cgcagtcgcc
      601 accagcggcc cgaacgaaac ttcgaggtaa tcgcagggag cgttattgac gccagcggta
      661 cccagcaccg cttcgccttt gcccgcaacg gcgggtcggc cgacgatttc gctcgcgccc
      721 tggtcagagc aggcgggcgg agcgggacgc cccccactgt gctgtcagat ggtgatgccg
      781 gttcgtggga ttggcagcga gctgtactac ctaccgcgac tgtcgtgttg gactggttcc
      841 acatcgccat gcgctttgag cacgtcctgc gggccgccgc cggcgctatc ccgacttccg
      901 ccccgccaac cgcaacattg aaacccgagc cgcagcatga gtccccacga cattgcatgc
      961 tctcatgttt ggagcaggca tagcctgact ccggttgaac acaccatcac tctgagggac
     1021 ggccactttc accgccaagt tttgcggccg gcccattact ccatctaatc acgggcgctg
     1081 ggaaagccga cattccccgc cggaccaatc acgtcaaatg tattattgcc gttcggaatc
     1141 gcgacgccgc cgccgctcgg catcccgaac gtctggtaat gagaggtacc gccggtcgtt
     1201 attccgaacc cgccgagcgg gagctgaaag atctgccctg ctctcccgga atcaggcgcg
     1261 ttgggtgtga acaatgtgtg tgcgctgtct gatcgcaccg tttggatttg gcctgcatcg
     1321 ctctggaccg ggccatagaa actgacgagt agcgcgatag tggatgcggt taacatgaag
     1381 gggggccttt cgcctggtaa cgtgaatagt tttacttgtc ctgtcgcaca tgtgggacgg
     1441 gcctaagtaa tgtcgaggac aatttaaccc gccgctcgcg aatgcgagct gttcgtgttt
     1501 aagaaagcac gggcatcggg gacagaacga accgcctttc acccaaactc aactttattt
     1561 gctgtacgat ccagatttac ctttcacgcc gagcagcgtg gttgccctcg acagaacgca
     1621 aggtcggaga ttcgaggtga taaaccaatg caaccatttc atggcaatat gcccgaaaag
     1681 aataggccag agcatcgcat ttgaggatgc tcatgaggca cggcagtgct ttgagatccc
     1741 cccattcata aaccgcatga aggtatcggc ttcagctatc tggcacacac caatgaagcg
     1801 cctacttcgg ttcggtgatt gaaccgtcgc atcagtggca ccggttcgca acgcaacgag
     1861 gcttcgatga cattgaggtc aggatattcg acacatcgcg ccaggcgcgg ggctgtttct
     1921 gctattttgc tgagtagttt gatcctggcg gccgctccgg cacaagcgga cggcgatgtc
     1981 gcggcgggtc gtgacctgtt cgcttctcgc tgcgccgcat gtcacggact taatccgaca
     2041 cgaaagcccg gacccccact atccggagtt tatgggcgcc gggccggttc agtgctcttc
     2101 tatcattact ccccggcgct agcgggatcg tccatcgtct ggaacgcgtc caatctgaat
     2161 cgctggctca gtgacccacc agccttcatt cttggcgtca atatgcaggc aaaggtagac
     2221 agtgcccaag aacgcctgaa tatcactgca tatttgaagt ctctgggtcc ggcgagggca
     2281 acacatgatg gcggggtcag ggccacggcg agcatcacga gatgatcgca ataccgatac
     2341 gcaagacccg cgcacgccga ttactatcac gtctactgga tgtaataacc gagaagcagg
     2401 catcgtgcgt tacacaggac tggtgcagac atggtcaatc tttgctgatt ttgggcatcg
     2461 ccagattttc catgttggca ttcgagagaa ggtcgctgcg gtcgaagtca tcgtttgatc
     2521 ataaagacgt cgagacgcag tcacttccga aatccgagtt tataccgaaa cgaaagaact
     2581 agagatatac aatggcacgc aacacatctc ttccggtccg gcaactcggc ctgaccgata
     2641 tgcacatcac tcgggtcggc tttggatcct gggcggtcgg tggcgattgg gcggtcggat
     2701 ggggcagcca ggatgatcga gactctgtcg ccgcgatccg tcatgccgtc gcccgcggtg
     2761 tcaactggat cgacaccgcg gcgatttacg gtgttggcca ttcagaagag gtcgtagcat
     2821 cggcgctttc agcgatctct ctcagtgagc ggccctacgt cttcacaaag tgcggcctga
     2881 tatccgatcc ggcggatcgc tctgcgatgc cgcgacaggt cggcgcgcca gccagtctgc
     2941 gtcgtgagat cgaggactct ctgcgtcggt tgagggtgga acgaatcgat ctttatcaaa
     3001 tgcattggcc agctgaggac gggacaccga tcgaagtctc ttggcagact ctgctcgacc
     3061 tgaaacgcga aggcaaggtc ggggctgttg gactatccaa tcataatacc gcgcaattag
     3121 ccgctgccga ggcgctcgga catgtggaca ccttgcaacc accattttcc gcgatcaagc
     3181 gggacgtcgg ggccgcggaa ctaccttggt gcaatctgca tgggacaggc gtcatcgttt
     3241 atagcccaat gcaagccggc ctgctgagcg gatcgttcag cgtcgccagg gctgcgtctt
     3301 tgccggccaa tgactggcga tcgcgcaatg ccgatttcac tggcgaagcg ctgacacgca
     3361 acctcaaggt ggccgaagct atgcgtggtg ttgccgagcg tcaccatgcg actgttgccg
     3421 cggttgcggt tgcgtggaca ctcgcatggc cgggcgttac ggcagcgatc gtcggcgcac
     3481 gccatgcgcg ccaggtcgat ggctggctga gcgccgcgac gttggcgctg acgactgccg
     3541 acatggccga aatcggggat gccatcgacc gcagtggtgc gggatccggt ccgtccaggc
     3601 cgaaatgagc gctggccctt cggggccggc ccgtctgccc gaggcgaggt catcttttcg
     3661 gtgcgatagg cttttttggt tggcaggcat tgagcgacat ggcaacgata tacccctcca
     3721 tccggatcgt cagcccggac gaattcgact caggaacggc acaaacggcc gggtccgagc
     3781 gtcaggccgc gatttcgccg gaacttggtg tcgtaacgtc catgtggggt gggcggtttg
     3841 aggtcaagcc cggcgcgcgt accggcattc accatcacgg gatccagcag accatcgctt
     3901 tcgttttatc aggcgtgtgt gaagtccgct ggggatcacg cggggaattt tccgcgaccg
     3961 cgaaagccgg tgacttcatc cacgtgcctg ccttcctacc ccatatggag atcaacctct
     4021 ccgaaaccga gtcgttccac tgggtggtgg tacgcagcac ggcaacgccg atcgtcgtca
     4081 atcttccgga cgagatgtgg gcataggctc gaactgccgc tcccggcccg gatcaagttt
     4141 atccatccga cgaaatatgg aggcatctgg cgaggtgaag tcccccatgc ccccgcccga
     4201 aggcaccatt gcagatcgag ccgggccact cacgtttcgg tgtactcacg cccaaccatt
     4261 tcattagcac ccgtccgctc gcaagcccga ggcccgccgc acaccggccg gcaccgctga
     4321 ggcgatggca atggatcacg aggccaattg gcggtatcac taccgctctg gtaagctggg
     4381 acgattcagt ccattttccg gcgccttcct tcagatgaca acgccgcgtt atcatcaacc
     4441 atcgatcgga agatcgccat gaaaaccccg gccacggcga caactgcgcc ggtcgaagac
     4501 aaaccgcccg cgcctccgcc gcgccgtggt caatcgcaaa gcgaaccaag gtcaccgcat
     4561 cccgggccgc agcaaccggc ggttatgacc tggaattcgt tcgaccttaa tctcttggtg
     4621 gtcttcgacg caatcatcca ggagaagacc cttacccggg ccggacatcg gctcgggatg
     4681 agtcaacccg ccgtcagtca tgcgttggca cgccttcgcc acatgctcaa agacgatctc
     4741 ttcgtgcgca cgcccgacgg catgtcccca accccccgcg cggagcgcat ggccggtccg
     4801 gcccgggccg cactgcacga attgcaggtg acactggaag ccgatgaatt cgacgcaccc
     4861 caggcatcgc gcgactttgt cgttgcagtg aataactgtg ccgcgcgggc ggtcatcccg
     4921 gcgctcgttc gccgcatcgc gaagctggcg ccttcggtgg ttctcgatgt ccgaccgctc
     4981 ggccagggaa atgtgctcga ccaactcgat ggcggtgaga ttgaactggc cctgacgacg
     5041 ctgatcgacg gtggcgatcg attcaaatgc gtcggactcc ttgacgacga atacgcggtg
     5101 attgtgtcga aggatcaccc gatggcagcc gatctcgatc tctccatcga agacttcgcc
     5161 accttgcccc atatcgacgt tacctccagc ggcgacgaca cgcatttcgt cgatgacgtg
     5221 ctggccgagc acggtctcac gcgtgttgtc gttgcaaagt tgccgcttca ttctctggta
     5281 tccgtactgg ttggctctcg ggcgctcgcg gtgttgccgc ggcgggtggc cgccgacctc
     5341 gtcgccgtct gcccgttgac gatgctgcct ttgccgattc cttcgccgcg ggtctcgctc
     5401 tcaatgatct ggcaccggcg gctcgacaat catcccgccc atcgctggct acgcggaacg
     5461 ctgcgagatg cggtaaccgg ggcgtgatct ctcggtgggc cggatctggc gtcatgaata
     5521 ccgaacgatc aattcaagaa aagcgggaca gggcggtggt ttggcggcat ggggccataa
     5581 gtacatcgaa ttggtatcac gggactaaag cggtgacatt gccgtcgcca ggcaaggttc
     5641 acgccgcggc gtcacgaccc tgccacgggt cagtacagat agatgccttg cacaaaggaa
     5701 taaatcatgg cccccgctat tctcaacatc actccagagc gaagactgtc gaggtatctc
     5761 caggagatcg ggaaattcgg agtgctcacc ccgcaggaag aactgttact ggctcgccgc
     5821 tggcgtgaca cccaggacat cgaggcagcg caccggctcg ttacctccca tcttcgactg
     5881 gttgcaaaaa tcgccatggg ctaccgcggt tatggcctgc cggtcagcga gttgatcagc
     5941 gagggcaata ccgggatggt tcaagcggtc aaacgtttcg atcccgaacg cggattccgc
     6001 ctggcaacct atgccatatg gtggattcgc gccgctatcc aggagtacgt cctgcattcg
     6061 tggtcactgg tgaaaatggg caccaccagc gcgcagaaga agctgttctt caacctgcgc
     6121 ggcctgaagg gccagatgca ggcgatcgac ggtggcgacc tgcaacccga acaagttgcc
     6181 aggatcgccg atatgctgga cgtcccggag aatgacgtcg tcagcatgaa ccgccgcctc
     6241 gccacgccgg atcacagcct gaacgccccg ttatttctcg acagcgaagg cgaatggcag
     6301 gactggttgg tggacgattc ggaaaaccag gaaacctcgc tcgtcgagca ggaagaactg
     6361 agcgggcgca agaccctgct tgccggcgcg ttgaaagttc tgaatgaacg tgaacgccac
     6421 atcatcaatg agcggcgcct gaaggacaat ccggccacgc tggaagaact atccgaacac
     6481 taccacatct cccgcgaacg ggtgcgccag atcgaggtcc gggcattcga gaagcttcag
     6541 aaagccatga aggctgaaat tgccgaacgt gcgcggtcca gatcccaaat atccggtccc
     6601 acacaaaccc ggcgggcggc ttagaaccct aaccatcgtc aggccaatgg gagttacgcc
     6661 acatgtccga tcgcccttca tcctcctccg cgggacaatc cggcatccgg gttaaggaac
     6721 gacaggaggc cgccgtgttc gagccctatg agagcccggc cgggggatgg ggcgcactgc
     6781 gcgccaccgc ggaggcgctg cgtgagcaaa gcgttgtcct gaagggatcg aaggctctcc
     6841 tttcgatgaa ccagcccgac ggatttgact gcccgggatg cgcatggccg gatccggcgc
     6901 atacaagttc cttcgaattc tgcgaaaacg gcgcgaaagc cgtttcgttc gagctcacca
     6961 aacgaaaggt gacacgcgac ttcttcgccg cccatagcgt gcgcaacctg gaacagcaga
     7021 ccgattactg gctggagcag caaggacgcc tgaccgagcc gatgcgctac aacagggcga
     7081 cggaccacta cgagccgatc ggttgggatg atgcctttgc catgatcgcg gcgcatcttc
     7141 tcgcattgaa agaccctgac agggcggatt tctatacatc cggccgaacc tccaacgagg
     7201 cagcttttct ctaccagctt ttcgtgcggc gattcggcac caataacttt cccgattgtt
     7261 ccaacatgtg ccacgaagcc accagcgtgg gtctgcccga aagcatcggc atcggcaaag
     7321 gcaccgttct gctggaggat ttcgacgcga ccgacgcaat cttcgtgatc ggacaaaacc
     7381 ccggcaccaa cagcccacgc atgatgacca gcctgcggga tgcctcgcgg cgcggggttc
     7441 cgatcgtggc catgaacccg ttgcttgagc gcgcattgga acggttcgcg gcaccacagg
     7501 acccgatcga aatggcaacg ttcagcgcga cccggatcgc cagcgaatat tgccaggtcc
     7561 gtgtcggcgg tgacgtcgcg gtcctgaagg gcatgatgaa gctgatcctc gagtcgcacg
     7621 acgagtccgt tcgggtgggc ggcgagccgg tgctcgatct tcccttcatc gagcaacaca
     7681 cgaccggctt cgacgcgttc gcggacgatc tgcgacgcac gtcctgggat gctatcctgc
     7741 gcgtctcggg ggtgccgcga gcccagatcg accggatcgc cgagatctac atgcagtcca
     7801 gatcggtcgt catctgctac ggcatgggcc tcacccagca ccgttacggt accgcgaacg
     7861 tgcagcaggt cgccaatctc ctcatgatgc gcggcaattt tggccgccca ggcgccggca
     7921 tctgccctgt ccgcggccat tcaaacgtgc agggtgaccg gaccgtcggg atcgacgaga
     7981 agccctcggc ggaactgctc ggacagatcg agaaagtgtt cggctttcgg ccgcctcagc
     8041 atcatggacg gtcggtggtg gattcgctcc aggcgatgat tgacggtcaa tccgacgtgt
     8101 tcatcgccct tggcggaaac ttcgtcgcgg cggtcccgga tgagaaggtc gtgaagcagg
     8161 cgatgcggcg actgaagttg accgtgggga tcaatacaaa actcaatcgt ggccacgtcg
     8221 tgcatggcca ggaggcgctg atcctgccct gcctggcccg aagcgatatc gatctccagg
     8281 caaccggccg tcagagcatc acggtcgaag acagcatgtc gatggttcat gcctcaagcg
     8341 gcctcgtgga gccaccaagt cacgatctca aatccgaagt gtcgatcgtc tgcggcatgg
     8401 cgcgcgcgac gctgcctgcc ggcgagatcg gctgggatgg tttcgaggct gattacactc
     8461 tgatccgcga caagatcgag gcggtattcc ccaaactgtt cgcggacttc aacgcccgca
     8521 tcggtatccg gggcggcttc catctatata acggcccgcg tgcccgggaa tggaagacgg
     8581 cgaccggacg cgcgaatttc ctgatttgtg atggcgtcgc ggaagacccc gacgttgcgg
     8641 acccggcggt gctgtacctg acgacgatcc gcagtcatga ccaatacaac accacgatct
     8701 acggcctcga cgatcgctac cgcggcgttt tcggaggccg gatggtcgtc ttcatgaaca
     8761 ccgacgacat ggcggagcgt cacatcgaac cggactcgct cgtcgatctc gaatcggtga
     8821 cggacgcggg cgatgtgcgc cggaccgcgg cgggcttcaa ggtgaaaccg tacaacattc
     8881 cgcgcgggtc gatcgccgct tactatcccg agacgaatgg actgctgccg ctcagtcatc
     8941 acgacaagcg aagcaagacg ccatccgcga agtccattcc ggtgttggtc aggccaatgg
     9001 ccaaagcagc cgcctgatcc gccggtgaca gttctgtccg cgcatttgca tattcacggt
     9061 tgtcattggc cgtggaggaa tttgccgacg atatagggtt cagacagcca gtggcgggtg
     9121 ccgtcattgt cgcgactggc agtggacttt gaagaggaac cttcacgtgg cgaaagtggt
     9181 ctgcgttctg tatgaagatc cgaccggtgg acatcctctc gtctatgctc gggatgggat
     9241 accgcgcgtc gaactttatc cggatgggca gaccatacct tcgcctgtcg ccgttgactt
     9301 caggttcggc gaacttctgg gcggcgtgac aggcgccctc ggcctgcgat cgttccttga
     9361 ggcgcgaggg catacgctga tcgtgacggc ggatcgcgac ggaccaaatt cggtgttcga
     9421 ccaggaattg ccggaagcgg acattgtcat ctcgcaggca tgctggccgg cgtgcctgac
     9481 ggcggaacgg atcgccaagg caccaaagct caggctggtg atcaccgcgg gcgttggctc
     9541 gaaccatatc gatctcgcgg cagccgggag ccgcaacatc acggtaactg aaatcacctc
     9601 ttcagccagc atcagcgccg ccgaatacgc ggtgatgctg atcctctcgc tggttcataa
     9661 cgctatgcca tcgtctgttc cgggcgccag gttcgatcgg aatattggcg actacgcaca
     9721 acgcgcctac gatcttgagg gcatgcatgt cggaagtgtg ggcgccgggc gctcgggatt
     9781 tgctctcctc cggcggttgc gtcccttcga tgtgcgcctg cactacaccg acccacgccg
     9841 gctgccgttg gcggtcgaga atgagcttgg gctcacctat cacccgacca cggcggtcat
     9901 ggtaccgaac tgcgacgtgg tgacgatcca ctgtccatta cataccgaaa ccgcgcaatt
     9961 gtttgacacc ggcatgatcg gactaatgaa gcgcggcgct tatctgatca atacggccca
    10021 ggacgggatc tgcgaaccgg atgccgtcgc gcttgcgctg gagacgggac ggctcgcagg
    10081 ctacgccgcg gataccagat ccacgctatc gcccgcgggg acaccaatcc acatcgcggg
    10141 cgcgacgctg gccgcgcagg cgcgctacgc cgcgggcacc cgtgaggtgc tggaaagctg
    10201 gttcgcgggt gtgtcgatac gtgacgacta tctgattgtc gatcgcggca ccctgaccgc
    10261 cgtcggccgg cgttcttacg gcatggatcg gcgggcgcat gcgctgcctg ttcacggccg
    10321 acccacactt ctgtagctgc gtcgcgtaac cttcggtcta gcgaacgata cgtcggcatt
    10381 gacgattgtg ggctgcttcc gaaggcgcca ccaacttaaa cattccgagg tttcaccatg
    10441 gacacgccga ttgtccgccc tgctacacaa caagcgggaa attccagtaa cgccgccccc
    10501 gcctcgatcc gccatatcgg cgttgtggga gtcggccgga tgggtcacgc gttcgcgcgg
    10561 aaccttctgg cggacggcta ccagatcatc gcctacgccc gggataaaaa acgagtgcgg
    10621 gacctgatgt ccgacggcgc ccgggcggcg gaacggctcg aggacctcgc ttcgtgcgac
    10681 atcattgtca gttcgctgcc cgacgacgca gcgctgaccg cggtcgccct gtcacccgcg
    10741 ggactggtat cgatcctcgc tcctggcgct gtccacgtct ccatgagcac ggtcagtccc
    10801 gcgctgtcgc ggcgtctcgc cgaggcgcat gcggcgcacg gacagggttt cgtggcggct
    10861 cccgttctcg gcaatccgga tgcggcccga gcgcggctgc tctacgtgct ggccggcggc
    10921 acgcgggacg cgatcgaacg cgttcggccg gtgctgcaga gcctcggcca acgcgtgttc
    10981 gtgatcggag acgatgccgg cgcggcgagc cttgtgaagc tcgccggtaa tacattgacc
    11041 gcggcgacac ttgaaagcat gggcgaagtc ctggccctgt tgcgcaagtc cgggatcgac
    11101 cctcatcttg cctacgacgt cttcaccgga tcgctgttcg acggccgcgt ccacaaggtt
    11161 tatggcgcga agatcgtgga agggcagtac agcccgcccg gcatgacggc tccgctcgca
    11221 ctcaaggatc tgcggctcgc actcgcggaa gcggaacacc tcgcggcacc gatgccggtt
    11281 gccaacctgg ttcacgatcg tctggccacc atggtggcgc gcggttgggc tgggctcgac
    11341 tggtcggcgc tcggccttct cgcggcatcc gaggccgggc tggaccccga agtcgcggct
    11401 cgccagtctt aagcagggtt gtcatgccca ccgccttcct catcctcgtt ggctgcgagc
    11461 ttatcggcga agtgctgcgc cgggtcttcc atcttccctt gccaggaccc gtcatcggca
    11521 tgtctttgct tgcgttggcg ctcacggtcg gcggcgatgg ccaggcgccc ggtgttacgg
    11581 accaatattc tcacctcacc cggaccgcga atgccctcat cactaacatg ggcctgttgt
    11641 tcgtgccggc cggcgtgggt gtgatcgccg agttcggcgt gctgcggcag aattggctcc
    11701 cgatcctggt tggccttctc gcatccacgg tccttggcct ggtcgtgacg gggctcgtga
    11761 tgcatcgcct ctgccgggcg gggaagcgaa gccggccggc gcccgagctg ctggccacct
    11821 atcaggagaa gcggggatga gaagcaccct gcagacgctc tggacgccgt tggtgccttc
    11881 gccgctgctc tggattgccg cgaccctgct ggcatatggc ctcggccagg cggtccagcg
    11941 agccctgcgc ggctcgccac tggccaatcc cgttctgatc gcgatcctgc tcatgaccgt
    12001 gcttctcgag gccaccggca cgccgtatca aacctatttc gccggcgcac agtttatcca
    12061 ctttctgctt ggtctggcaa cggttgccct tgccgttccg cttgcgcgca acatcggcca
    12121 cgtgggccgg agcatccgtg ggacgggact ggcgcttctc gcgggatcgt tgacttcgac
    12181 gctgacgggc gtcggcgcgg tatggctgct tggcggcagc agggcagtcg cgttctcgat
    12241 ggctccgaag gcggtgacga caccaatcgc catggctgtc gctcagcagg ctgggggcgt
    12301 gccggcgctc accgcggcac tggcgatcgc aggcggaatc gtcgccgcgg cgattggtga
    12361 gacggtgctg cgacgattgc atatcgacga ctggcgagcc catgggcttg cagccggcgt
    12421 ggccggcagc ggcttggctg cggcgcaggt tgcctcccgc gacggcctcg cggccgcctt
    12481 cgctgccgtc gggatcggtc tcaatggtct attgaccgcg gtcattgtgc cgatcattgc
    12541 attgttgtgg ccgattgggc gaggtctgcc cagaccggga gtgtgatcca tggcggggtt
    12601 gcgcggcgga agcgtgacgt tgccttcatg tcctggcctc tatactatgc acacttacga
    12661 aacgaatgac gatcgctgac ccggcatcgg cgggagagac agaaaagggg ccggtatgat
    12721 acgaaacctt cggcgaaccg gggagggcgg cattcgccat cggggcgatt gcggctatca
    12781 ggctgagagc ggcgaaggcg gcaaggatca agttcttcat tggaattctc catctcgggt
    12841 cgggcggaat gcccagcctc gatggacggc cggatcgtct ggccgactga caaactcaac
    12901 gttgctttgg cgaatgggcc aattcacgag actgatcgcc agcagtgttg aacacccggc
    12961 cagtgaacac gagtggcgac gacacctgcc ttggtggccc gatccacacg gcccgtcggc
    13021 gcaatatctg accgatagga cccggcacga ccggcattat tcactagccg catgtgaaga
    13081 tgcgatttgt cagtctgaca tgtctctgtc cgcgaccgat atcatgcacc caggctggcg
    13141 atttggtcag gccagccgga gagatcgtgc ttgcattaag cgtggcacgg atctgcttgg
    13201 acgaccggcg aaataaagcc cagacggcga tcgacaggac agaatccatg aagaaacacg
    13261 ttgccatcat aggactttgc gctgtgatcg ccgctggggc cggcggcgtt gccgcccagc
    13321 aggtccaggg tgcgaagccg gcgcctcggc cgcaaaccag cgtacccgcc ataccggtcg
    13381 ttgccgaaaa ggtcaaaacg gccgacacgc ccctggtgat gtccgggatc ggctcggtgg
    13441 aggcgtacaa cgtcgtgaac gtcagggccc aggtcaccgg cacgatcgac aagatcggct
    13501 ttgtcgaagg ccagaccgtg catcccggca gtctcatcgc gcagctcgac ccacgtccct
    13561 atcaggcggc gcttcagcag gccgaggcga atctggcacg cgatcaggca aacctgacca
    13621 atgcacagac cgatcttggc cgctatgtcc cgctggcgag gcaaggatat gcggcagcgc
    13681 agcaggtcgc cgatcagaca tcagtggtga accagctcca ggccacggtc ctcagcgata
    13741 gagccgccat cttcaatgcg caaacgcaac ttggctatac cacgatcgat tcgccgatcg
    13801 acggagtgac cggcatacgc cacgtggaca tcgggaatat cctgcagccg gcttccacca
    13861 cgccaatcgt aacgatcacc caggtccagc cgatctccgt cgtctttacg ctgccgcaga
    13921 aggacgtccc ggcggtgcag gcggcgatgg ccaagggccc cctgcaaacc atcgcgtacg
    13981 gccaggacga tcgcaccgaa ctcggtcaag gcaccctcct gatggtggac aacacgatca
    14041 accagagttc gggcacagtg cagctcaagg cgacgttccc gaatgcgaag aaggcgctgt
    14101 ggccgggcga gttcgtcaat gtgcggttga ccgtcgcggt ccggcatgac ggcatcagcg
    14161 tgccgctgag cgccctgcag caaggtcaga ccggcgacct tgtctacgtc gtccagccgg
    14221 atggcgtggt gcgagagcgc ccggtggcgg tggcgcaaac gctcaacggg cgcgcgctga
    14281 ttgatcacgg actgacggct ggcgagacgg tggtgaccgc gggtcaatat cgcctcagcg
    14341 acggtgtcaa ggtttccgag gtctcggcaa acgatccaca ggtgcagaac agtaccgaag
    14401 ccagcgcggg gatgctgtga tgaacatagc agcccccttc atcaagcagc ccatcgcgac
    14461 cgcgttgctg atggtcgcga tcgttctgct cggcggtacc ggttatcggc tgctgccggt
    14521 ggcctcgctg ccgaacgtcg ccttccccac gatctcggtc accgcccaga tggcgggcac
    14581 cgacccggag acgatggcct cttcggtcgc gacgccgctg gagaagcagt tcgggcaaat
    14641 tccgtattta acccaaatga cctcgaccag ttcaatgggt tatacgcaga ttacgctgca
    14701 attcgccctg agcgacagta tcgcgtccgc ggcacagttg gtgcaaacgg ccatcaacgc
    14761 ggcggccggc cagcttccga aagatatgcc tacgccgccc acctaccacg agaccaatcc
    14821 ggcggacgcg ccgattctcg ttcttggtgt tacctccgac actttgccga tcaccacggt
    14881 ggacgactac gccgaaagca tactggagca gaagctgtcg caggtgccgg gtgtcggcct
    14941 ggtcaacatc ggcggggagc agcacccggc gattcgtatc cagttcaatc cggcgcaact
    15001 cgccgccaac ggcctggacc tggagaatgt tcggacggca ctgaccaatg tcagcgtcga
    15061 tcagccgaag ggcagcctgt atggtccggc acgctccaac acgttgcaga ccaacgacca
    15121 gatactgacg ccggccgaat gggacaatca gatcatcgcc tatcgcaacg gtggaccggt
    15181 cagggtgtcg gatgtcggca aggccattgt cgggccacag gattcgacgt tgaagggctg
    15241 ggtaaacctg catcgcggca tcatcatcgc gatccagcgt ttgcccgggg ccaacgtgat
    15301 cagcacggtg caggcgatca aggcagcgct gccgcaactg gaaaaatcga tcccgccgac
    15361 gatcaagatc gcggtgatcg cggaccgcac gacgacgatc cgcgcgtcgg tcgcggatgt
    15421 gcagtccacc ctgatcctga cgatcgggct ggtcgtcggc gtgatcttcc tgttcctgcg
    15481 cagtgtctgg gcgaccctta tccccgccgt cgcggtgccg atatcgatca tcggcacgtt
    15541 cggcgtgatg tatgtgttcg gctacagcct ggacaacctg tcgctgatgg gcctgtcgat
    15601 cgcggtcggc ttcgtggtgg acgatgcgat cgtcatggtc gagaacgtcg cgcgtcacat
    15661 cgaaatgggc aaaacgccaa tgcaggcggc gttggatggc gcgggggaga ttggattcac
    15721 cattctttcg atctccattt cgctgatcgc ggtattcatt ccactcctgc tgatgagcgg
    15781 catggtcggc cgcatgtttc aggaattcgc ggtcacggtg acggttgcca tcgccgtctc
    15841 cgcgctggtg tcattgacgt tgacgccgat gatggcggcg cgactgctgc ggcatgagca
    15901 tcccgagcag caggggcgtt tgtcgcgcgg gctggagcgg tgcttcgacg cgctgctggc
    15961 ggtttacgaa cgcggcctgg tcgtggcgtt gcggcaccgg tttgttacgc ttatggtgat
    16021 gcttggcacc gtgctgctga ccggctggct gttcgtcatc atcccgaaag ggttcttccc
    16081 cgaacaggat accggcctga tccttggcgt gaccgaggcc gcggaagata tttcgcctac
    16141 cggaatgacc gcggtgcagc agcaagtgat ccgcgtcgtg ctgaaggatc cggcggtcgc
    16201 gacggttggc gcctatatcg gtgccggcgg cgccacatcg acggaaaacc agggacgtat
    16261 cttcataacg ctcaaaccgg aggcccagcg tccatctatg tcaacagtga tggcccggct
    16321 cgatcaggcg atgcacgccg tgcccggtgt tcatctgttc atgcagcccg tgcaggacgt
    16381 caatattggc ggtcgcctga ctgcaacgca gtaccaatac acgctaagcg acgtcgattt
    16441 cagcgaactt aaccagtggg cgccacgcat tcaggccgcg ctggccaaag tgccgcagat
    16501 catcgacctg acgagcgacc agcaatccgc cgcgccgcag cttaccctcg cgatcaatcg
    16561 ggacgtcgcg tcccgcctgg gcatcaccgc cgccgacatc gactcggtgc tgtatgatgc
    16621 cttcgggcag cggcagatct cgcaactcta cactagcctc aaccagtact acgtgatcat
    16681 ggagg
//
LOCUS       DATAVD010000715         2116 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_439403, whole genome shotgun sequence.
ACCESSION   DATAVD010000715 DATAVD010000000
VERSION     DATAVD010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2116
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_439403"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..197
                     /locus_tag="VHX39_13445"
     CDS             <1..197
                     /locus_tag="VHX39_13445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020594165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX3992171.1"
                     /translation="VHEMPPMMGAEDFSYMLEARPGAFIFCGNGNSAGLHHPAYNFDD
                     EAIVFGTSYWVKLVENTLAA"
     gene            297..1820
                     /locus_tag="VHX39_13450"
     CDS             297..1820
                     /locus_tag="VHX39_13450"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX3992172.1"
                     /translation="MADTDRLPRIVGVQISAKHAFSKVPNDAIRLIENFGVEGDSHAG
                     ATDQHLYHIRRFGQRPNLRQVHLIQAELFDEVSGKGHAVRPGELGENIATRHVDLLGL
                     PTGTRLRLGSEAVIELTGLRNPCHQIEDFQPGLLKHMVEATPTGVVRKAGVMSVVLQG
                     GDVRPGDAIEIELPPLPHEPLIYRVPELEVRITSVRREAEGIHSLEFRALDDSALPGF
                     TAGSHIDLMLAPGLRRSYSLCNDPRESDRYVVSVNRDPGSRGGSRHVHEELRVGDRLH
                     ISPPRNNFQLDETAAHTVLVAGGIGITPLKAMISRLDGLGLSWQLFYATKTRATAAFL
                     DELRRLEELKPGRVHCHFSAESNGANLDTKKLDMKALVSAAPGQTHFYCCGPPSMITA
                     FEEATTALPRSQVHVEYFAARGAAAVDGGFTITLRRSRRTLEVCRGHTILETLLAAEI
                     NVPHSCKEGVCGSCKVRVIEGQPDHRDLVLSPDQHARNDQMMVCCSGSKTPSLVLDL"
     gene            complement(1899..>2116)
                     /locus_tag="VHX39_13455"
     CDS             complement(1899..>2116)
                     /locus_tag="VHX39_13455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019089859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEX3992173.1"
                     /translation="TAALTIAAADGYGLPVSTTHVLSSGIAGSMAANGSGLQWSTIRN
                     IALAWVLTLPAAMILSGVLYLIFSRLF"
BASE COUNT          406 a          633 c          691 g          386 t
ORIGIN      
        1 atgtccacga aatgccgccg atgatggggg cggaggattt ttcctacatg ctggaggcgc
       61 ggccgggcgc gttcatcttc tgcggcaacg gcaacagcgc cggactgcat catcccgcct
      121 ataatttcga cgacgaggcg atcgtgttcg gtacctccta ttgggtcaag ctggtcgaga
      181 acacactggc ggcgtgagga aacatcaagc tgttggcggg cttggcgtcg aacttgcagg
      241 gcagggtgtc gaagaggatg cctgttacgg tgtcctcgtt cgaggttgaa acgccaatgg
      301 ctgacacaga tcgtctcccc agaatcgtcg gcgtgcagat cagcgccaag cacgccttca
      361 gcaaggtgcc gaacgacgcg atccggctga tcgaaaattt cggcgttgag ggggactcgc
      421 acgccggcgc caccgatcag cacctctacc atatcaggcg atttggccag cgcccgaacc
      481 tgcggcaagt ccatctgatc caggcggagt tgtttgatga ggtctccggg aagggacacg
      541 ccgtccgccc gggcgaattg ggcgagaaca tcgcgacaag gcatgtcgac ttgcttgggc
      601 tgccgaccgg tacccgtctt cgactgggtt cggaggccgt gatcgaactc accggcctgc
      661 gcaatccgtg ccaccagatc gaggattttc agcccggact gctcaagcac atggtggagg
      721 cgacaccgac cggtgtggtg cgcaaggcag gcgtcatgag cgtcgttctg caaggcggcg
      781 acgtgcggcc gggcgatgcg attgaaatcg agctgccgcc gctgccgcac gagccgctga
      841 tttatcgggt accggagctc gaagttcgga ttacgtcggt tcgtcgcgaa gcggaaggca
      901 ttcattcgct ggaatttcga gcgctggacg acagcgcgct tccaggcttc acggcgggtt
      961 cgcatatcga cttgatgctg gcccccggcc tgaggcgcag ctattcgctg tgcaacgacc
     1021 cgcgcgagag cgatcgttat gtggtttcgg tcaacaggga tcccggcagt cgtggcggct
     1081 ccaggcacgt gcacgaagag ctgcgcgtgg gtgatcgcct gcacatcagc ccgccacgca
     1141 ataatttcca gctcgacgaa accgccgcgc acacggtgct ggtcgccggc ggcatcggca
     1201 taacacctct gaaggcgatg atttccaggc tcgatggcct cgggctgagc tggcaattgt
     1261 tttacgcgac gaaaacgcgc gccaccgcgg cgtttctcga cgaactgcgg cgcctcgagg
     1321 agctcaagcc ggggcgcgtc cattgccatt tcagcgcgga gtcgaacggc gcaaatctgg
     1381 acactaaaaa gctggatatg aaggcgctgg tgtcggccgc gcccggccag acgcatttct
     1441 actgctgcgg tccgccgtcg atgattaccg catttgagga ggcgaccaca gcgttaccga
     1501 gatcgcaggt ccacgtcgag tatttcgcgg ccaggggcgc agccgccgtc gacggtggct
     1561 tcacgattac gctgcggcgc tcccgacgaa cgctggaggt gtgccgcggc cataccatcc
     1621 tggagacgtt actggctgcc gagatcaacg ttccccattc ctgcaaggaa ggcgtgtgcg
     1681 gatcctgcaa ggtcagggtg atcgaaggcc agccggatca tcgcgacctg gtgctcagcc
     1741 cggaccagca cgcgcgcaac gatcagatga tggtgtgctg ttccggctcg aaaacgccat
     1801 cgctggtgct ggatctctaa gcgtatcgcc cggcgctcaa agcaaaaggc ccgcgcggat
     1861 ggcgcgggcc tttgttgttg gtgctgtcga ctgctggatc agaacagcct ggagaagatc
     1921 agatacagga cgcccgacag gatcatcgcc gccggcaggg tcagcaccca ggcaagcgcg
     1981 atgttgcgga tggtcgacca ttgcaatccc gatccgttcg ccgccattga gccggcgata
     2041 ccggacgaca gcacatgcgt ggtcgagacc ggcaggccgt aaccgtcggc cgccgcgatc
     2101 gtcagcgccg cggtga
//
LOCUS       DATAVD010000716         1724 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3044559, whole genome shotgun sequence.
ACCESSION   DATAVD010000716 DATAVD010000000
VERSION     DATAVD010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3044559"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..297
                     /locus_tag="VHX39_13460"
     CDS             <1..297
                     /locus_tag="VHX39_13460"
                     /inference="COORDINATES: protein motif:HMM:NF025050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3992174.1"
                     /translation="DVIRTKNADGSTRLDLNLSGQKVFIAHADPAKTGAPPASPYLGL
                     DHFGMTVDDLEGAVKELKGKGVAFTTDPKEIRPGVKIAFLTAPQNVSIELIQRG"
     gene            complement(461..1366)
                     /locus_tag="VHX39_13465"
     CDS             complement(461..1366)
                     /locus_tag="VHX39_13465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0018576 - catechol 1,2-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0009712 - catechol-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HEX3992175.1"
                     /translation="MVDLDELTITDATLEQMANTANPRLKQIMDAAVRHMHAFVREVE
                     LTPAEWIQGLQFLTAVGQACTPIRQEFILLSDVLGVSAVVNALHDRKAKELGSQSSLL
                     GPFFREGAPELPLGAQIVEQPTAEELVVHGQVTDTHGAPVPGALIQVWQTSERGLYDL
                     QERNGESMDMRGNFRTDATGHYYFRTVRPLGYSIPMDGPVGEMVHAQGRHGMRPSHIH
                     MLIGADGHRELVTALYFGDDAYIDSDTVFGVSGSLVVAAKDDPASPVKGLRAVRYDFR
                     LAKADPGESGRVGADPTTFMPKAAE"
     gene            complement(1394..>1724)
                     /locus_tag="VHX39_13470"
     CDS             complement(1394..>1724)
                     /locus_tag="VHX39_13470"
                     /inference="COORDINATES: protein motif:HMM:NF016627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003839 - gamma-glutamylcyclotransferase
                     activity [Evidence IEA];
                     GO_function: GO:0061928 - glutathione specific
                     gamma-glutamylcyclotransferase activity [Evidence IEA];
                     GO_process: GO:0006751 - glutathione catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HEX3992176.1"
                     /translation="DQARTELLLPFRRELFTHSYDARWVSVATREGVIRAVTFVVNRA
                     AVRYVRRLDLELVAHHVASASGVLGSCMEYLHQTLQALDVLGLDDRMLRQVYRICAAR
                     AAANQPC"
BASE COUNT          324 a          560 c          526 g          314 t
ORIGIN      
        1 gatgtcattc gcacgaagaa cgccgacggc tcaacccggc tcgacctgaa tttgagcggg
       61 cagaaggtgt tcatcgcgca cgccgatccg gcgaagaccg gagcgccgcc ggcgtcgccg
      121 tatctcggcc tggatcactt cggtatgacg gtcgacgacc tcgagggcgc ggtgaaggaa
      181 ctgaagggga agggtgtggc gttcaccacg gatccgaagg aaatacgtcc aggggtgaag
      241 atcgcatttc tgactgcgcc acagaatgtg tcgatcgagt tgatccagcg cgggtagggc
      301 ctggaggtgg gcgctaatcg catcccgcgc cgataattcg atccgcctac caacctgcct
      361 acgccgtacc cgttttgatc cggccatcca ttgctgctcg gtgcggcgac aaatggccgg
      421 atcattgtgc cgaggtgtcg gtccatcgac cggttgccgg ctactccgct gccttcggca
      481 tgaacgtggt cggatcggcg cccacccgcc cgctctcgcc cggatccgcc ttggccaacc
      541 ggaagtcgta acgcacagcg cgcaaaccct tcaccggcga ggccggatcg tccttcgcag
      601 ccactaccaa tgaccctgac acgccaaaca ccgtatccga atcgatgtag gcgtcgtcgc
      661 cgaaatacag cgcggtaacc agttcgcggt gcccatccgc cccgatcagc atatgaatat
      721 gcgacggccg catcccatgc cgtccctgag cgtgcaccat ctcgccgacc ggcccgtcca
      781 tcggaatgga atatcccagc gggcggactg ttcggaagta ataatggccg gttgcgtcgg
      841 tccgaaaatt gccgcgcatg tccatcgatt cgccgttgcg ttcctgtaga tcgtaaagcc
      901 cgcgctcgct ggtctgccaa acctgaatca gcgcgccggg gaccggggca ccatgcgtgt
      961 cggtgacctg gccgtggacg accagttcct ccgccgtcgg ctgctcgacg atctgcgccc
     1021 ccagaggcag ttccggggcg ccttcgcgga aaaatggtcc gagcaagctg ctctgcgagc
     1081 ccagttcctt ggccttccgg tcgtgcagcg cgttgaccac ggcgctgacg ccaagcacgt
     1141 cggacagcag gatgaattcc tggcggatcg gagtgcaggc ctggccaacc gcggtcagga
     1201 attgcaggcc ctggatccac tcggccgggg tcagttctac ctcacgaacg aaagcatgca
     1261 tgtgccgaac ggccgcgtcc atgatttgct tcagacgagg gttcgccgtg ttggccattt
     1321 gctccagcgt ggcgtcggta atggtgagtt cgtcgagatc gaccatggct gcctcctttg
     1381 ttctcccgcc actctagcag ggttggtttg ccgccgcacg tgcggcacaa atccggtaga
     1441 cctgacgcag catgcggtcg tccaggccaa gtacgtcgag cgcttgcaac gtttggtgca
     1501 gatattccat gcaggagccc agaacgccgg atgcacttgc gacatggtgc gcgacaagct
     1561 ccagatcgag ccgccggaca taacgcacgg ccgcccggtt cacgacgaac gtcaccgccc
     1621 ggataacgcc ctctcgcgtc gccaccgaga cccaacgcgc gtcgtagctg tgcgtgaaca
     1681 actcgcgccg gaacggcaac agcaactcgg tgcgtgcctg atcg
//
LOCUS       DATAVD010000717         8706 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3605957, whole genome shotgun sequence.
ACCESSION   DATAVD010000717 DATAVD010000000
VERSION     DATAVD010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8706
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3605957"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            422..4234
                     /locus_tag="VHX39_13475"
     CDS             422..4234
                     /locus_tag="VHX39_13475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX3992177.1"
                     /translation="MSPRYRIGFDIGGTFTDFILLDTARTQIRLHKCLTTPADPSVGA
                     LAGLTEIVGNAGLRLSEIDEIVHGTTLVANALIERQGARLGLITTAGFRDILEMGTEQ
                     RYDIYDLFLRFPDPLVPRRRRLEVAERMDRDGNTIIPLDRDAVRDAARSLASEGVEAI
                     AVCFLHAYRNPAHEREAGEIIRALLPDTAVSLSSDVVAELWEYQRLVTTCANALVQPL
                     MDRYVRRLERELWQRGFRGALTLMHSAGGLVSPETARAFPIRLLESGPAGGGLATAFF
                     GKLAGHDDVISFDMGGTTAKACLIENGQATIAAEMEAARVHRFKKGSGLPIKAPVIDM
                     IEIGAGGGSIADIDEVGLLRVGPRSAGADPGPACYGRGGTDATVTDANLLLGYYDPGF
                     FLGGRMPLDRDAAAHALAALGSRIGLSATETAWGIHRVVTDSMAAAARIHIVEKGKDP
                     RAYAMVGFGGAGPAHAAGVARILGVREVLIPPASGAASALGFLAAPLSFEQVRSHPLR
                     LDEPGAAARIDAVLNDLTAETRARLETAGVAAGDVVVERSADMRLFGQLHEINFVLPA
                     GRIDEAAMPGIRAAFAAAYAARYTSVYEGVAVQLVSLRVRCRGRLPELTIAQAETSAA
                     GPEQKGCRAAFFGDGFQETPVYDRYALRLGSMIQGPAIIEEREATTIVGPGDTVTVDE
                     TGTLHVIVAVVPPAAARITQTTPQDVARALIEADPVSLEIMWARLVTVVEEMWHTIVR
                     TAFSLIVSEAQDFATDLLDPDGESLAHSPRAMPVFNLTVPIAVKALLQKFPPSTLVPG
                     DVLITNDPWLCAGHLFDIAVVTPVFRDGRVVALTATVGHVGDIGGTKDSLRAREIYDE
                     GFQIPPMKLYRAGVPNDDLLTLLRENVRKSDEVLGDIFSFVAANQLGADRLLTFMTDY
                     GMHDLRALAAVVQDRSEFAMREAIRALPDGEYHSEITNNPLGTILRYPLKVTVAGDTI
                     ELDFAGAPAQQPMGGLNSTFTYTTAHATYPMKCILSPGIRSNAGCYRPFTVKAPEGSI
                     LNCSKPASVNLRTRTGWYIAPNIFRALAEAAPTQVQAATGLPHAMNIYGRDADGRLYA
                     DHFFIGGGQGGSAHGDGKSALLYPTSAANTSIELMETRAPVLVVEKTLIVDSGGAGKF
                     RGGLGVRTRVRKLHDDGLPTLFSVYPEGAGIATDGLFGGHPGGGVRGVVLDRAGNLVH
                     DCGTGELVTLTTTERMVEIRLAGGSGFGDPRARARSDLENDVADGYVSRDAATRAYGV
                     PDAATAAE"
     gene            4269..4421
                     /locus_tag="VHX39_13480"
     CDS             4269..4421
                     /locus_tag="VHX39_13480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992178.1"
                     /translation="MSQALVDELPAIDSNRVHPAFFSVGSLVLITPLCIVGAIIGTQR
                     GVTTGL"
     gene            4547..6337
                     /locus_tag="VHX39_13485"
     CDS             4547..6337
                     /locus_tag="VHX39_13485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX3992179.1"
                     /translation="MNERNLRDAIEDVRRGRLSRRAFTLRVLGLGLTAPLAAQMLASS
                     GVAVAADAPAYKPTKRGGGGALKVLWWQGATLLNPHFAVGTKDQDGSRIFYEPLAGWD
                     PDGNLVPVLAAEVPTIENGGLAKNGLSVTWKLKQGVKWHDGQPFTADDCVFNWQYAAN
                     PATAATTIGSYQDINVVKVDDHTIRIEFEKPTPFWADAFVGVFGMIIPKHIFEPYTGA
                     KSRDAPANLAPVGTGPYLFVGFNPGDLVQGKINPNYHQDNRPYFDTIEMKGGGDAVSA
                     ARAVMQTGEYDFAWNMQVEDEILKRLEAGGQGHAQITATGNIEHIELNNTDPWKEVDG
                     ERSSLKTKHPFLTEPAVRQALNMLVDRVSIHKFIYGRTGFDTANFINNPKRFVSPNTK
                     YEFNIDKAAKLLDDAGWKPGSDGVREKNGVKLHVVFQTSINAPRQKNQEIVKQACQKA
                     GISVEIKTVTASVFFSSDVANPDTYTHFCADLQMFTTTMAQPDPAVFMRQFLSAEAAT
                     KANKFQGRNITRWQNSEYDKLYHDAETELDPVKRAALFIAMNDLVIKNVVVIPDVYRT
                     LVSAVANKLHAPVSGWDSNFWAVQDWYRDA"
     gene            6410..7369
                     /locus_tag="VHX39_13490"
     CDS             6410..7369
                     /locus_tag="VHX39_13490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3992180.1"
                     /translation="MIRYLARRLLITIPSLLGISMVLFAVLALAPGDPFGELASNPAI
                     PPQVQAALRLKFGLDDPVPVRYLHWLTAMLHGDWGFSFASRVDVNVLILQRLPTTLAV
                     IGASQLLALLIALPVGIYAATRPYSVFDQIASTFALIGFSLPTFFTGIVFILVFSINL
                     NWLPFVFRSDLAATGIAWWWGELKQSIMPVLVLGLFQGATWTRFVRSAVLDVIRLDYV
                     TTARAKGLPESGVVLKHIVRNALIPVVTLIALQMPVVFGGAIVTEQIFRIPGIGSLLI
                     SAILANDTPVIMAVTFVFACLVILFNLIADLLYGWLDPRISYR"
     gene            7335..8285
                     /locus_tag="VHX39_13495"
     CDS             7335..8285
                     /locus_tag="VHX39_13495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3992181.1"
                     /translation="MAGSTHASPTAEAAGIAVPGKARVRAVTPWTEAWRRFRRHRLAV
                     VSAVVLLLMMFAVAFGPLLWQVQINDIDFTAQLQGPSWAHPMGTDDLGQDLLARMLYG
                     GRISLAVGLAAMSVSVVVGTVVGSVAGISRGFVDSALVWLIDLFLSLPQLPVLLLLLY
                     LFREPLKSVVGPQLSIFILIVVGIGSFRWMTVARLVRAQFFALREKEFVEAARALGAS
                     TFRIVLRHILPNALGPVIVAGTIDVAAAIILESTLSFLGLGFPADIPTWGRILYDAKD
                     NLDVAPHWALFAGGAIFLAVLTINFIGDGLRDALDPRRIL"
     gene            8319..>8706
                     /locus_tag="VHX39_13500"
     CDS             8319..>8706
                     /locus_tag="VHX39_13500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3992182.1"
                     /translation="MSERLLDIRGLKTHFDTDDGTVRAVDGVDLSIDRGETLGVVGES
                     GCGKTVTAMTVLKLIQMPPGRIAAGSISWLGRDLVPLGANEMRRIRSKEIAIIFQEPM
                     TSLNPVYTVGEQIAEVIRLHEGLNRRD"
BASE COUNT         1552 a         2735 c         2644 g         1775 t
ORIGIN      
        1 gccccttccg ctaacggtgg ggaccgtgtt gccagcttca ggtccgtgaa tcgcacagcg
       61 catgactgct ttctggttgc cacaacccgg cggttgctaa actattcatc gcaccaagtc
      121 accggattca cgaccagaaa aaatgccaat ttaattacaa tttaaagtca atatcattgc
      181 attcgcgtga cacacggatg acgtggcgat ttagtccatg cgtttacggc ttgattcgag
      241 tgatttggat cccgtacccg accccgtgat caccgcaaaa aagatgccga ccggccgacg
      301 cggagtcgcg cggcgtggcc gcttccgcaa accctgacca ttctgttgcc agaacccggc
      361 gaggtggcca aactcttctg ctgatcgcca gccaactggg cagtgctggc ctggaggccc
      421 catgtcccct cgttatcgta ttggctttga catcggcggg actttcactg acttcatcct
      481 cctcgatact gcccgcacgc aaatccgctt gcacaaatgt ttgaccacgc ccgccgatcc
      541 ctccgtcggc gcactcgcgg ggttgacgga aatcgtcggc aacgccggcc tgcgattgtc
      601 cgagatcgat gaaatcgtcc acggcacgac acttgtcgcc aatgcgctga tcgaacgcca
      661 gggcgccagg ctcggcctca tcacgaccgc gggttttcgg gatatcctgg agatgggtac
      721 cgagcagcgc tacgatatct acgacttgtt cctgcgtttt cccgatccgt tggtgccgcg
      781 ccgccgacgc ctcgaagttg cggagcggat ggaccgtgac ggcaatacca tcatcccact
      841 ggaccgcgat gcggtacgcg acgccgcccg cagcctggcc tcggaaggcg tcgaagcgat
      901 cgcggtctgc ttcctgcatg cctatcgcaa ccctgcccac gagcgcgaag ccggcgaaat
      961 tattcgcgcc ctgttgccgg acactgcggt ttcactctcg tccgacgtgg tcgccgagtt
     1021 gtgggaatat cagcgtttgg tcaccacttg cgccaacgct ctcgtgcagc cgttgatgga
     1081 ccgctacgtc cgccggttgg agcgcgagtt atggcaacgc ggcttccggg gcgcactgac
     1141 actcatgcat tctgccgggg gtctggtgtc ccccgagacc gcgcgcgcct tcccgatccg
     1201 gctattggag tccggcccag cggggggcgg cttggcaacg gcgttctttg ggaaactggc
     1261 gggccatgac gatgtcatca gtttcgatat gggcggcacg acagcaaaag cctgcctgat
     1321 cgagaacggg caagccacca ttgctgccga aatggaagct gcccgcgtgc accgcttcaa
     1381 gaaagggtcc ggcctgccga ttaaagcgcc ggtcatcgat atgatcgaga ttggcgccgg
     1441 tggtggatca atcgccgaca tcgacgaggt tggtctgctg cgggtcggtc cacgctccgc
     1501 cggtgccgat ccgggtccgg cctgctacgg tcgcggcggc accgatgcaa cggtcacgga
     1561 cgcaaacctg ttgctcggct attacgaccc gggcttcttt ctcggcggga ggatgccgct
     1621 cgatcgcgac gccgccgcac acgcgcttgc tgccctcgga tcgaggatcg gactttccgc
     1681 gacagagacg gcctggggca tccaccgggt cgtcaccgat agtatggcag ccgccgcgcg
     1741 catccacatc gtcgagaaag gcaaagaccc gcgcgcctat gccatggttg gcttcggcgg
     1801 cgccgggccc gcccatgctg ctggtgtcgc tcggatactc ggtgtgcggg aagtgctcat
     1861 tccaccggcc tccggtgcgg cttcggcgtt aggctttctc gccgccccgc tgagtttcga
     1921 gcaggtgcgc agccatccgt tgcgcctcga cgaacccggc gccgccgccc gcattgatgc
     1981 cgtgctgaat gacctgaccg cggagacgcg ggctcgcctt gaaacggccg gcgttgcagc
     2041 tggcgatgtg gttgtcgaac gctccgccga catgcggttg tttggccagc tccacgaaat
     2101 taatttcgtg ctccccgcgg gacgtatcga cgaggcggcg atgccgggca tccgggccgc
     2161 cttcgccgct gcttatgccg cccgctatac ctcggtgtat gagggtgtgg cggttcaatt
     2221 ggtgtcgttg cgggtgcgct gccgcggccg gttgcccgaa ctgaccattg cgcaagcgga
     2281 aaccagcgct gccgggccag agcagaaggg ctgccgtgcg gcgtttttcg gcgacggctt
     2341 tcaagaaacg ccggtctacg accgctacgc gctgcgtctg ggctctatga ttcaaggacc
     2401 ggcaatcatc gaagagcgcg aagccacgac gatcgttggt cccggcgata ctgtcaccgt
     2461 ggacgaaacc ggcacgctcc acgtcatcgt tgccgtcgtt ccgcctgccg ccgcgcgcat
     2521 cactcagacg accccgcagg acgtggcccg cgctttgatc gaagccgacc cggtttcact
     2581 tgaaatcatg tgggcgcgtc tggttacggt cgtggaagag atgtggcaca cgatcgttcg
     2641 cactgccttc tccttgatcg tctccgaagc gcaggatttc gccaccgacc tgctcgaccc
     2701 cgacggcgaa agcctggccc attcgccgcg cgcgatgccg gtgttcaacc tgacggtacc
     2761 gattgcggtg aaggcgcttt tgcagaaatt cccgccgtcg actttggtgc ctggcgatgt
     2821 gctgattacc aacgacccct ggctttgcgc cggccatttg ttcgatatcg ccgtggtcac
     2881 cccggttttc cgtgatggca gggtggtcgc actgaccgcc accgttggcc acgtcggcga
     2941 catcggcggc accaaggatt cgcttcgcgc tcgcgaaatc tatgatgagg gattccaaat
     3001 tccgccgatg aaactctacc gggcgggtgt gccgaacgac gacctgctga ccttgctgcg
     3061 cgagaacgtg cgaaagtccg acgaagtact gggcgacata ttttcatttg tcgccgccaa
     3121 tcaactcggc gcggaccggt tgctgacctt catgaccgat tatggcatgc acgatctacg
     3181 agccctcgcc gccgtcgtgc aggatcgttc cgagttcgcc atgcgcgagg caatccgggc
     3241 actgccggac ggcgagtacc actccgaaat caccaacaac ccgcttggca caattctgcg
     3301 ctatccgctg aaggttaccg tggcgggtga cacaatcgag ctcgatttcg ctggcgcccc
     3361 ggcccagcaa ccgatgggcg gattgaacag cacattcacc tataccaccg cgcatgcgac
     3421 ctatccgatg aagtgcattc tctcgccggg catacggagc aacgccggct gttatcgtcc
     3481 attcacggta aaggcgccgg aaggttcgat cctcaattgc tcgaagcccg ccagcgtcaa
     3541 tttacgcacg cgcactggtt ggtatatcgc gcctaatatt tttcgggcgc tggccgaggc
     3601 ggctccaaca caggtgcagg ccgccaccgg attgccgcac gccatgaaca tctacggccg
     3661 cgacgcggat ggaagacttt acgccgacca cttctttatc ggtggcggcc agggcggatc
     3721 ggcccatggc gatggcaaat ccgcgctgct ttatccgacg tcggcagcca atacgtccat
     3781 cgaactgatg gaaaccagag cgcccgtgct ggtggtggaa aagaccctca tcgtcgactc
     3841 cggcggtgcc ggcaaattcc gcggtggact gggcgtgcgc acccgggtgc gcaagctaca
     3901 cgacgatggc ctgccgaccc tgttctcggt ctaccccgaa ggtgccggca tcgcgacgga
     3961 cgggctgttc ggcggccatc ccggaggcgg cgtgcgaggc gtcgtgctgg atcgcgccgg
     4021 caacctggta cacgactgcg gcaccggcga actcgtcacg ctgaccacca ccgaacgcat
     4081 ggtcgagatc cgtctcgccg gcggttccgg ttttggcgat ccgcgggcgc gtgcccgctc
     4141 cgacctcgag aacgacgtcg ccgacggcta cgtttcccgg gacgccgcca cacgcgctta
     4201 tggggtcccc gatgcggcca ccgcggccga atgatccgtc cgccacatcc ttcgaatgag
     4261 ggaccaccgt gtcacaggcg ctcgtagacg aactgccggc gatcgattcc aaccgcgtgc
     4321 atccggcgtt tttcagcgtc ggtagtctgg ttttgatcac gccgctgtgc attgtcggcg
     4381 ccattatcgg cacccagcgg ggtgttacta ccggtctgta acccgtggcg ttggatcgtc
     4441 gttgtcctcg gtttcaattc tgcctagcat ccgtgcgaca agcggaatgg cacgctcctt
     4501 gcgagcgacg tagccgcgcc ggggccctgg gagaaggtga gtgagcatga atgaacgaaa
     4561 tttgcgcgac gccatcgaag acgtgcgacg aggcaggctt tcccgccgcg cgtttaccct
     4621 cagggtgctc ggtttaggcc tgactgcgcc gctcgcagcc cagatgctgg cctcatccgg
     4681 agtcgctgtt gcggcggacg cgccggctta caagccgacc aagcgtggcg gtggcggggc
     4741 gctcaaagtg ctgtggtggc agggcgccac gctgctgaac ccgcatttcg cggtcggcac
     4801 caaggaccag gatggttcgc gtatcttcta cgagccgctg gccggttggg accccgatgg
     4861 caacctggtg ccggtgcttg ccgccgaggt cccgaccatc gagaacggcg gtctggccaa
     4921 gaatggcctg tcggtgacct ggaagttgaa gcagggggtc aaatggcacg acggccagcc
     4981 gttcaccgcc gacgattgcg tctttaactg gcagtacgcc gccaatccgg ccaccgcggc
     5041 gacaaccata ggcagctacc aggacatcaa cgtggtcaaa gtcgacgacc acacgatccg
     5101 catcgaattc gagaagccga cgccgttctg ggctgatgcc ttcgtcggcg tgttcggcat
     5161 gattatccct aaacacatat tcgaacccta cacaggcgcc aaatcgcgcg atgcgccggc
     5221 gaatctggcg ccggttggca ccggcccgta cctgttcgtg gggttcaatc cgggcgacct
     5281 cgtgcaaggc aagatcaatc cgaactacca ccaggataac cggccgtact tcgacaccat
     5341 cgagatgaag ggcggcggtg atgcggtgtc ggccgcacgt gccgtcatgc aaaccggaga
     5401 atacgatttc gcctggaata tgcaggtcga agacgagatc ctgaagcggc tggaggcagg
     5461 cggtcagggc cacgcccaga tcaccgccac cggtaacatc gagcacatcg aactcaacaa
     5521 caccgaccct tggaaggagg tcgacggcga gcggtcaagt ctgaagacga agcatccgtt
     5581 cctgaccgaa ccggcagtac gccaggcgct gaacatgctg gtcgaccgtg tgtccataca
     5641 caaattcatc tatggccgca ccggtttcga taccgccaat ttcatcaata atccgaagcg
     5701 tttcgtctct cccaacacaa aatacgagtt caacatcgat aaagcagcga agttgctgga
     5761 tgacgccggt tggaagcctg gttccgatgg tgtacgggaa aagaatggcg tgaagctgca
     5821 cgtcgttttc cagacctcga tcaacgcgcc gcgccagaag aatcaggaga ttgtcaagca
     5881 ggcctgtcag aaagccggca tttcggtcga aatcaagact gtcaccgcgt cggtgttctt
     5941 ctcgtcggat gtcgcgaacc ccgacaccta tacccatttc tgtgccgacc ttcagatgtt
     6001 cacgacgacg atggcccagc cggacccagc cgtgttcatg cggcaattcc tgtcggcgga
     6061 ggccgccacc aaggcgaaca agtttcaggg gcggaatatc acgcggtggc aaaactctga
     6121 atacgacaaa ctctatcatg acgccgaaac cgaactggat ccggtcaaac gggcggcgct
     6181 gttcatcgcc atgaacgacc tggtgatcaa gaacgtggtg gtcatcccgg acgtctaccg
     6241 cacattggtg tccgcggttg cgaacaagct tcacgccccg gtcagtggct gggacagcaa
     6301 cttctgggct gtgcaggact ggtaccgcga tgcctgaaac ccgtctcaga ccctccgacg
     6361 cgggacccat gggccgggct gcattccatt ccggtaggaa tgctcgtttt tgatccgcta
     6421 tcttgcccgg cgattgctca ttacgatccc gagtctgctg gggatcagca tggtgttgtt
     6481 cgccgtgctg gcgctggcgc ccggcgatcc atttggcgag cttgcttcca atcctgctat
     6541 cccgccgcag gtgcaggccg cgctacgcct gaagttcgga ctcgatgatc cagtgccggt
     6601 ccgttacctg cactggctca ccgccatgtt gcacggcgat tggggtttct catttgccag
     6661 ccgggtcgat gtcaatgtgc tgatcctgca acgcctgccg accacgctcg cggtgattgg
     6721 agcgtcacag ctgctggcgc tgctgattgc gttaccggtc ggcatctacg ccgcgacgcg
     6781 gccttattcg gtgttcgatc agatcgccag cacgttcgcg ctgatcgggt tttcgttgcc
     6841 gacattcttc accggcatcg tgtttattct ggtgttcagc atcaacctca attggctgcc
     6901 gtttgtgttc cgctcggatc tggctgccac tggcatcgcc tggtggtggg gcgagctcaa
     6961 acagtcgatc atgccagtcc ttgtactggg cttgttccag ggcgccacct ggacacgttt
     7021 cgtacggtcc gccgtgctgg atgtgatccg gctcgattac gtcaccaccg cacgcgccaa
     7081 gggactgccg gaaagcggcg tcgtgctcaa acatatcgtg cgcaacgcat tgatcccggt
     7141 ggtgacgctg attgccttgc agatgccggt cgtgttcggc ggcgccatcg taaccgagca
     7201 aatctttcgc attccgggca tcggctcgct gctgatcagc gcgatcctgg ccaacgatac
     7261 acccgtgatc atggcggtga cgttcgtgtt tgcctgtctg gtcatcctgt tcaacctgat
     7321 cgcggatctg ctgtatggct ggctcgaccc acgcatctcc taccgctgag gccgccggca
     7381 tcgcggtgcc tggcaaggcg cgggtgcggg ccgtcacgcc atggaccgag gcctggcggc
     7441 ggttccgccg tcaccgcctc gcggtcgtca gtgctgtcgt cctgctgctc atgatgttcg
     7501 ctgtcgcatt cggcccgctg ctgtggcagg tccaaatcaa cgacatcgat ttcaccgccc
     7561 aactgcaagg tccctcctgg gcacatccga tggggaccga tgatcttggt caggacctgt
     7621 tggcgcgcat gctgtatggc ggccggatct ccctcgctgt cggccttgcg gcaatgtcgg
     7681 tatccgtcgt cgttggcacc gttgtcggat ctgttgccgg tatctcgcga ggtttcgtgg
     7741 acagcgcgct ggtgtggctg atcgatctgt ttctgtcgct gccgcagctt cccgtgctgc
     7801 tcttgctgct ttacctgttt cgcgagccac tgaagagcgt cgtcgggccg cagctcagta
     7861 tcttcatttt gatcgtcgtg gggatcggct cgttccgctg gatgacggtg gcaaggctgg
     7921 tgcgcgcgca gttcttcgcc ctgcgtgaga aagagttcgt cgaagctgcc cgcgcacttg
     7981 gtgcctcaac ctttcgtatc gtgttacgcc acattctgcc gaacgcgctt ggaccggtaa
     8041 tcgtcgccgg aacgatcgat gtggcggcgg ccatcattct ggagtcgact ttgtcgttcc
     8101 tcggcctcgg ttttcccgcg gacatcccaa cgtggggacg catcctctac gacgccaaag
     8161 acaaccttga cgtcgcccca cactgggctt tgttcgccgg cggagcgatc ttcctggccg
     8221 tgctcaccat taatttcatt ggcgacggac tgcgcgacgc gcttgatccg cgccgcatcc
     8281 tgtgatggcg caactgcgtt ctcgaccgag cgaacggcat gagtgagcgg ctgctcgata
     8341 tccgcgggtt gaagacgcac ttcgacaccg acgacggcac ggtgcgcgcg gttgacgggg
     8401 tcgacctcag catcgaccgc ggcgaaactc tgggtgtggt cggcgagtcc ggctgcggca
     8461 agactgtcac cgcgatgacg gtattgaaat tgatccagat gccgcccggc cgaatcgccg
     8521 ccggcagtat ttcatggttg ggccgcgatc tggtcccact cggcgcgaac gaaatgcgcc
     8581 gtatccggag caaggaaatc gccatcattt ttcaggagcc gatgacctcg ctcaacccgg
     8641 tttataccgt gggcgaacag atcgccgagg taatccggtt gcacgaaggt ctgaatcgcc
     8701 gcgatg
//
LOCUS       DATAVD010000718         8228 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_439652, whole genome shotgun sequence.
ACCESSION   DATAVD010000718 DATAVD010000000
VERSION     DATAVD010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8228
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_439652"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            60..1478
                     /gene="fliF"
                     /locus_tag="VHX39_13505"
     CDS             60..1478
                     /gene="fliF"
                     /locus_tag="VHX39_13505"
                     /inference="COORDINATES: protein motif:HMM:TIGR00206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009431 - bacterial-type flagellum basal
                     body, MS ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body MS-ring/collar protein
                     FliF"
                     /protein_id="HEX3992183.1"
                     /translation="MATARSLVSVSGLSGDSTTGYEIFDRGNDLAVTDFDQQVKLTRA
                     LEGELARTIVSVHGILHARVHLVLPQRQPFSHDRLHAQASVMLTVPGREMLSPEAVQS
                     VVDLVAAGVPGLRPQDVTVVDSNLHLLSQAGDGNDARSKTIMDESIQHKTEARLSMAV
                     EMMLEQTLGPGHVHAEASIRMNFDKVKETQEKFDPDGSVVRSTQNVTSNSKTTDKTGA
                     VSLQNNLPNADAGAAAAPGTQEGKQQETTNYEISKTVRAIVHDQPQIERITLAVMVDG
                     TDVAGADGKHTWKPRDQAQLDQISQLVKSAIGFDAKRGDQLDVVSMPFVSTLDQAEAT
                     PASRPARANGDLVTFLQMIAFGVVGFGIIILTARSIVTALNKPAVGLTIAGPAAGGLA
                     GEITDAATSAGTSLQPSPLGIGHTATGNALATAEDDDIVTMSNIQGQLRASSIRKVTQ
                     LVDRHPDTTLGIIRGWIATDNG"
     gene            2071..3465
                     /locus_tag="VHX39_13510"
     CDS             2071..3465
                     /locus_tag="VHX39_13510"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992184.1"
                     /translation="MMATTQTADYELGRTLDSIPFSAYHLLIIVVLGTVGFVEGYDLA
                     LGGSLIVLAKGPLHLTQTDIRWLVAAPTFVVVIGGFTASALSDRLSRKVVMQIGVVVS
                     TLFTLLIPLAQSAEQLILLRLLTGIGLGFAIPAPFPIAAELMPAQHRRTYGAIYEVML
                     ASAFTLLPFIAFLLAGNPDGFRLIALPGGLALGVVPVLVHFAIPESPRWYLRRGQPQA
                     AIDTVNLMIRRCGNRVPALTVAALRSHLALGREALPPFKALFQPGQLRWTVVGILTGI
                     SASTAYYTCAILLPKALVDQGGAVALSFGLSSVLFMASIPGKLFTGFLMEIIGRRWTM
                     TYSLAGSLPGIGLMAAAHWTGALAPVVFIAGGLITGFTVLSAFPCTRVYLSEQFPTAL
                     RGRGHFFGESSARLIAGVMFPLFLERYTASPLVFFGTLLAVVAIGAFVPLLFGRETVG
                     QLETVTNDGIRQAA"
     gene            3624..4901
                     /locus_tag="VHX39_13515"
     CDS             3624..4901
                     /locus_tag="VHX39_13515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014189102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PotD/PotF family extracellular solute-binding
                     protein"
                     /protein_id="HEX3992185.1"
                     /translation="MATTRSRGLRRRTLLATAGLAAGSGAVTGFPTIWAQNIKNITLR
                     QFGTGVSNLNAVAVKMKQDLGFTLEMTALDTDAVTQKAVTQPKSYDIADIEYFSIKKV
                     FPTGVMQPMDAKKIKLYDKIVPIFTTGKLTPTSKIAQGTSPYSVGFVDGPHGKTFAKH
                     ATEWMTLIPTIYNCDTLGIRPDLVGRPISHWKDLVDPAFKGKTAIMNIPSIGIMDAAM
                     VMESLGALKYADKGNMTKPEIDKTVDFLIRTKKAGQFRAFWKSFDESVNLMASGEVII
                     QSMWSPAVAAVKSKGIACTYQPLAEGYRAWAGGLGLAKHLSGLELDAAYEYINWYLSG
                     WVGAYLNRQGYYSAVLETAKANMSANEWGYWMEGKPATADILSPEGKVTAKTGEVRDG
                     GSFQERMSRIACWNSVMNEDRYMVQKWNEFIAA"
     gene            5297..6148
                     /locus_tag="VHX39_13520"
     CDS             5297..6148
                     /locus_tag="VHX39_13520"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3992186.1"
                     /translation="MERLKLVPFLQAAPLAAILIVFLLLPMCALIVVSFFDYNSVQMF
                     PAFELTNYTDALGSAVTWRTYLNTFRYTAIVWAVTTVLGFTVAYILAFEIRGQTTRMV
                     LFLVCTVPFLTSNIIRMISWIPFLGREGLLNSTLLKLGLIHHPLTFLLFSDFAVILAD
                     THLYVLFMVTPIFNTMMRIDRRLLEAALDGGAGWWRTITSVIIPLSKSGIAIGSIFVV
                     TMVMGDFITVRLMSGGQSASIGLMIANQISSLEYPAACANAVVLLAVVLMMITAILRI
                     VDIRKEL"
     gene            6148..6954
                     /locus_tag="VHX39_13525"
     CDS             6148..6954
                     /locus_tag="VHX39_13525"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3992187.1"
                     /translation="MAAKLRHAILLGILGLFILFLYGPTLTILVLSFQGPDGGLTFPM
                     NGFSLHWFARLFQTQAVGDFGGSLMRSFALATMVMISTVVVSLAAGMAFRRRFRGSGP
                     LFTLTVASLIIPSILVSLGVGLLFNALGLDPDWYSSAFGAQLTWTLPFGLLIMFAIFN
                     RFNRSWEEAARDQGATPWQSFRHVVLPIIMPGVIGIALFGFTLSYDEFARTLLTAGSD
                     NTLPLEIFGMTTSVTTPVLYALGTLTTVFSFVVILCSLVIVRILAAKRAA"
     gene            6982..7611
                     /gene="upp"
                     /locus_tag="VHX39_13530"
     CDS             6982..7611
                     /gene="upp"
                     /locus_tag="VHX39_13530"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEX3992188.1"
                     /translation="MPTVTVLDHPLLRHKLTLLRDKTTTTALFRQVAREISLLMAYEV
                     TRDLKLEPIEIETPLETMQAEHLAGKKLCIVSILRAGNGILEGILDLVPSARVGHIGL
                     YRDPETLRPVEYYLKLPNDIANRLVILVDPMLATGYSAIAAATRLKQAGVQAMKFVCL
                     LAAPDGVTAFTEAHPDVPVFAGAIDRELDSHGYIRPGLGDAGDRFYGTR"
     gene            7897..>8228
                     /locus_tag="VHX39_13535"
     CDS             7897..>8228
                     /locus_tag="VHX39_13535"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3992189.1"
                     /translation="MFLAGLAAASLPIRVRAAEATPGVTATELKIGNTAAYSGPASAY
                     GIIARTEAAVFKMINEQGGVGGRKIVYDSVDDGYSPPKTVDQVRRLVEQDEVAFIFAT
                     IGTPSNTA"
BASE COUNT         1498 a         3031 c         2291 g         1408 t
ORIGIN      
        1 ccagccggca gatcccctac cgccagcagg gcagccggat tttcgtcccc gacagcgatc
       61 tggcaaccgc ccggtcgctg gtcagcgtca gcggcctctc cggcgacagc accaccggat
      121 atgagatctt cgatcgcggc aacgacctcg cggtcaccga tttcgaccag caggtgaagc
      181 tgacccgagc gctggagggt gagctggccc gcaccatcgt atcggtccac ggcatcctgc
      241 acgcccgcgt gcatctcgtc ctgccgcagc gccagccgtt ctcgcacgac cggctgcacg
      301 cccaggccag cgtgatgctg accgtgccgg gccgggaaat gctgtcgccc gaagccgtcc
      361 aatcggtcgt cgatctcgtt gccgccggcg tgccgggcct gcgcccgcaa gacgtcacgg
      421 tggtggattc gaacctgcac ctgctgtccc aggccggcga cggcaacgat gcccggtcca
      481 agacgatcat ggacgaaagt atccagcaca agaccgaagc ccgtctctcc atggccgtcg
      541 agatgatgct ggaacaaacc ctcgggcccg gccacgtcca cgccgaggcg tcgatccgca
      601 tgaacttcga caaggtgaag gaaacgcagg agaagttcga ccccgacgga tcggtcgtgc
      661 gcagcacgca gaatgtgacc tccaacagca agacgacgga caagaccggc gctgtctcgc
      721 tgcagaacaa cctgccgaac gccgatgccg gcgccgccgc cgcgcctggc acgcaggagg
      781 gcaagcagca ggaaacgacg aactatgaaa tcagcaagac cgtgcgcgcc atcgtgcatg
      841 accagccgca aatcgagcgg attaccttgg cggtcatggt cgatggcacc gatgtggccg
      901 gcgccgacgg caagcacacc tggaaacccc gcgatcaggc gcaactcgac cagatttccc
      961 aactggtcaa aagcgccatc ggcttcgatg ccaagcgcgg tgaccagctg gatgtcgtca
     1021 gcatgccgtt cgtgtccacg cttgaccagg cggaggccac gccggcctcc cgtccagcca
     1081 gggcgaacgg cgatctggtg acattcctgc agatgatcgc cttcggcgtg gtcgggtttg
     1141 gaatcatcat cctgaccgca cgatcgatcg tcaccgcact gaacaagccg gcggtcggtc
     1201 tcaccatcgc cgggccggcc gccggcggcc tggcagggga aatcaccgac gccgcaacct
     1261 ccgcgggcac ctcgctccag ccctctccgc tcggcatcgg ccacaccgcg accggcaacg
     1321 cactggccac cgccgaggac gacgacatcg tgacgatgag caatatccag gggcagttgc
     1381 gtgcgtcctc gatccgcaag gtcacccaac tggtagatcg gcaccccgat accacgctgg
     1441 gtatcattcg aggctggatc gccaccgaca acgggtaact ccgtcatggt gtccaaaggc
     1501 ccatcatcca cgccttcggg taacccccgt catggtggcc gaagggccgc catccacgcc
     1561 tggatcgcca cccaccacga gcgaccccgt catggtggcc gaagggccgc catccacgcc
     1621 ttcgtcgaga tacccaccgc ccgccgcaag aaagccgcgc cgatatgccg ccccagtgcc
     1681 tcccgtatcc ccgcacatcg ctccggtttt cgcccgcaaa cggaacgcgc gccaatcgcg
     1741 gcccgcgccc aaacaagggc ccgacatcgg cacgccggcc aacagctcaa caacaacctc
     1801 gatttgtatt aacggatgac aattccctag tcccggcgta gattactatc acgaccgacg
     1861 catcggccgt ggaagccaga aggacgggcc tgaaccgtct cgacttcctt cgatcgccaa
     1921 atgccagtac agcggcacta gacggtgcag cgacggcaaa gccgcgactc atacaatact
     1981 taatcgaaat aaaacggcat cgccacaact ggaccctcat accgccgccc tgactgcatc
     2041 tggtctctgc actcagtctg ggaggacacc atgatggcaa cgacgcaaac cgccgattac
     2101 gaactcggcc gcacactcga cagcattccc ttctccgcct accacctcct gatcatcgtc
     2161 gtgctcggca ccgtcggctt tgtcgagggc tacgacctcg ccctcggcgg ctcactgatc
     2221 gtgctggcca aggggccact gcatctcacc cagaccgaca tacgatggct cgttgccgcg
     2281 ccaacgtttg tggtcgtgat cggcggcttc accgcatcgg cgctgtccga ccggctcagc
     2341 cgcaaagtcg tcatgcagat cggcgtggtc gtcagcacgt tgttcactct gctgatcccg
     2401 ctggcacaat ccgccgaaca gctcattctg ctgcgtcttc tcaccggcat cggactgggc
     2461 ttcgccatcc ccgcaccgtt ccccatcgcc gccgaactga tgccggcgca gcaccgccgc
     2521 acctacggcg cgatctatga ggtcatgctg gccagcgcct tcaccctgct gccgttcatt
     2581 gccttcctgc tggccggcaa ccccgacggc ttccggctga tcgccctgcc cggcggcctg
     2641 gcgctgggcg tcgtgccggt gctggtgcat ttcgccatcc cggaaagccc ccgctggtac
     2701 ctgcgccgag gccagccgca agccgccatc gatacggtga acctgatgat caggcgatgc
     2761 ggcaaccgcg tgcccgcgct gacggtggcc gcccttcgct cccacctcgc cctgggccgc
     2821 gaggcgctgc ctccgttcaa ggcgctcttc cagcccgggc agcttcgctg gaccgtggtc
     2881 ggcattctga ccggcatcag cgccagcacc gcctactaca cctgcgcgat cctgcttccc
     2941 aaggcgctgg tcgaccaggg cggcgccgtc gcgctgagct tcggcctgag ttcggtgctg
     3001 ttcatggcga gcatccccgg caagctgttc accggcttcc tgatggagat catcggccgc
     3061 cgctggacca tgacctattc gctggccggc tcgttgccgg gaatcggcct gatggccgcc
     3121 gcccactgga ccggtgcgct ggcgccggtg gtgttcatcg ccggcggcct gatcaccggc
     3181 ttcaccgtcc tgtcggcgtt cccctgcacg cgggtgtatc tgtccgaaca attccccacc
     3241 gccttgcgcg gacgcggcca tttctttggg gaatcgtccg cgcggctgat cgccggcgtg
     3301 atgttcccgc tgttcctgga acgctacacg gcctcacccc tggtgttctt cggcacgctg
     3361 ctggccgtgg tcgcgatcgg cgccttcgtg cccctgctgt tcgggcggga gacggtcggt
     3421 cagttggaga cggtcaccaa cgacggcatc cgtcaggccg cctgacaggc aattgccggt
     3481 cattgccgcc ccgcgatgca acggaatgac cgggtgcttg aattttgctc aatcccgaac
     3541 gacgggtgcc gtctttcggc ccaacgaatt tggcacggcc catgcaaggt cgtccaaaga
     3601 ccaacaacag ggacgtcaca cgtatggcaa ccactcgatc acgcgggctt cgccgccgca
     3661 cccttctggc caccgccggc ctcgccgccg gcagcggcgc cgtcaccggg ttcccgacga
     3721 tctgggcgca gaacatcaag aacatcaccc tccgccagtt cggcacaggc gtgtccaacc
     3781 tgaacgcggt cgccgtcaag atgaagcagg acctgggctt cacgctggag atgaccgcgc
     3841 tcgacaccga cgccgtgacc cagaaggcag tgacccagcc gaaatcctac gacatcgccg
     3901 atatcgagta tttctctatc aagaaagtct tccccaccgg cgtgatgcag ccgatggatg
     3961 cgaagaagat caagctctac gacaagatcg tgccgatctt caccaccggc aagctgaccc
     4021 ccaccagcaa gatcgcccag ggcacctcgc cctactcggt cggcttcgtc gacggcccgc
     4081 acggcaagac cttcgccaag cacgccaccg agtggatgac gctgatcccc accatctaca
     4141 actgcgacac cctcggcatc cgccccgatc tggtcggccg gccgatcagc cactggaagg
     4201 acctcgtcga ccccgctttc aagggcaaga ccgccatcat gaacatcccc tcgatcggca
     4261 tcatggacgc cgcgatggtg atggaatccc tcggcgccct gaaatacgcc gacaagggca
     4321 acatgacgaa gcccgagatc gacaagaccg tcgacttcct gatccggacc aagaaagccg
     4381 gccagttccg cgccttctgg aaaagcttcg acgaaagcgt gaacctgatg gcctccggtg
     4441 aggtgatcat ccagtcgatg tggtcgcccg ccgtcgccgc ggtgaaatcg aagggcatcg
     4501 cctgcaccta tcagccgctg gccgagggct accgagcctg ggccggcggc ctgggcctgg
     4561 cgaagcacct cagcggattg gaactggatg ccgcctacga atacatcaac tggtacctgt
     4621 ccggctgggt cggcgcctac ctgaaccgcc agggctacta cagcgcggtg ctggaaacgg
     4681 cgaaagcgaa catgtcggcc aacgaatggg gctactggat ggagggcaaa ccagccaccg
     4741 ccgacatcct cagccccgag ggcaaggtca ccgccaagac cggcgaggtg cgcgacggcg
     4801 gttccttcca ggaacgcatg agccgcatcg cctgctggaa ctccgtgatg aacgaggacc
     4861 gctacatggt ccagaaatgg aacgaattca tcgccgcctg atccaaggca cccaaagcgt
     4921 cgcccccgtc agcgccgccc ccgtcagcgt cgcccctctc aacgtcgccc ctctcaacgt
     4981 cgtggtgagc gaaggctcac cacccacgcc ttcgtccagt ccgcccgcct ctccgacatg
     5041 ccccgcctcg acacaccccg cctctccgac acgccccgct ccgacacgcc ccaccccgac
     5101 atgccctacc cgctcggccc cttcgctgac cccggcgatg gtctgggtcg cgtggaaacc
     5161 ggcgtgatcc gtgttgatac gtcggtccag atcgatccac ctacgctacg gtatccgata
     5221 atccgccgct atttcgaccc ttgacccccc atccctcact tgcgacgctg cgccgcacaa
     5281 aacggaaggt aaccccgtgg agcgactgaa actggtgccc ttcctccagg ccgcccccct
     5341 ggccgccatc ctgatcgtct tcctcctgct gccgatgtgc gccctgatcg tcgtcagctt
     5401 cttcgactac aacagtgtcc agatgttccc cgccttcgag ctgaccaact acaccgacgc
     5461 cctcggttcc gcggtcacct ggcgcaccta cctcaacacc ttccgctaca ccgccatcgt
     5521 ctgggccgtc accaccgtcc tcggcttcac cgtcgcctac atcctggcat tcgaaatccg
     5581 cggccagacc acccgcatgg tcctcttcct ggtctgcacc gtgccgtttc tgacctccaa
     5641 catcatccgc atgatctcct ggatcccgtt cctcggccgc gagggcctgc tgaacagcac
     5701 cctcctgaag ctcggcctga tccaccaccc gctgaccttc ctgctgttct ccgacttcgc
     5761 cgtgatcctg gctgacaccc acctctacgt cctgttcatg gtcaccccga tcttcaacac
     5821 catgatgcgc atcgaccgcc gcctgctgga ggccgccttg gacggcggcg ccggctggtg
     5881 gcgcaccatc accagcgtga tcattccgct gtccaaatcc ggcatcgcca tcggctcgat
     5941 cttcgtcgta acgatggtga tgggcgactt catcaccgtc cggctcatga gcggcggtca
     6001 gagcgcctcg atcggcctga tgatcgccaa ccagatctcc tcgctggaat accccgccgc
     6061 ctgcgccaac gccgtcgtgc tgctggcggt ggtgctgatg atgatcaccg cgatcctgcg
     6121 catcgtcgat atcaggaagg aactctagtg gccgccaaac tccgccacgc catcctgctc
     6181 ggcatcctgg gactgttcat cctgttcctc tatggcccga ccctcaccat cctggtgctg
     6241 tcgttccagg gccccgacgg aggcctcacc ttcccgatga acggcttctc cctccattgg
     6301 ttcgcccgcc tgttccagac ccaggccgtc ggcgatttcg gcggctccct gatgcgctcg
     6361 ttcgccctgg caacgatggt gatgatctcg accgtcgtcg tctcgctggc cgccggcatg
     6421 gccttccgcc ggcgcttccg cggctccggc ccgctgttca ccctgaccgt cgccagcctc
     6481 atcatcccgt cgatcctggt cagcctcggc gtcggcctgc tgttcaacgc gctgggcctc
     6541 gatcccgact ggtacagctc ggcgttcggc gcgcaactga cctggaccct gccgttcggc
     6601 ctgctcatca tgttcgccat cttcaaccgc ttcaaccgat cgtgggagga agccgcccgc
     6661 gaccaggggg caacaccgtg gcaatccttc cgccacgtcg tcctgcccat catcatgccg
     6721 ggcgtcatcg gcatcgccct gttcggcttc actttgtcct atgacgagtt cgcccgcacg
     6781 ctgctgaccg ccggcagcga caacaccctg ccgctggaaa tcttcggcat gaccaccagc
     6841 gtaacgaccc cggtgctgta cgcgctggga accctgacga cagtgttctc ctttgtggtt
     6901 atcctctgct ccctggtgat tgtccgtatc ctggccgcca aacgagcggc ttagacgcac
     6961 cgtggaaggg agacgaacgc catgccgacc gtgaccgtgc tggatcaccc gctgctgcgc
     7021 cacaagctga ccctgctgcg cgacaagacc accaccaccg ccctgttccg ccaggtcgca
     7081 cgcgagatca gcctgctgat ggcctacgag gtcacccgtg acctgaagct ggaaccgatc
     7141 gagatcgaga ccccactgga aaccatgcag gccgaacacc tggccggcaa gaaactctgc
     7201 atcgtctcca tcctgcgcgc cggcaacggc atcctcgaag gcatcctcga cctggtccca
     7261 tccgcgcgcg ttggccatat cggcctgtac cgagacccgg aaacgctgcg cccggtggaa
     7321 tattacctga agctgccgaa tgacatcgcc aaccgcctgg tcatcctggt cgacccgatg
     7381 ctcgcgaccg gatactcggc gatcgccgcg gccacccgcc tgaagcaggc cggggtccag
     7441 gccatgaaat tcgtctgcct gctcgccgcg ccggacggcg tgacagcctt caccgaggcc
     7501 catcccgatg tcccggtctt cgccggcgcc atcgaccgcg aactcgacag ccacggctac
     7561 atccgccccg gcctcggcga tgccggcgac cgcttctacg gcacccggta gcccattccc
     7621 gcgtattttg ctcgccttgc caggcggcac agcgtttgac cgtcctgcgc tggcctctcg
     7681 ccgtcctggc gacgaaggtc ggcagccacg ccttcattgc gaaaagccaa aagggattcg
     7741 acccggactt cggcatgccg acaccgcgta accacgaccc atgtccccac cgcaaccctg
     7801 cgcccatacc agtcaacccc acgcacgact ggtatcctcc agcaaaccgt gtagcctccc
     7861 aagaaaatca acgggaggaa atcaatgtcc agacgaatgt tcctggcggg acttgccgcc
     7921 gctagcctgc cgatccgcgt gcgcgccgcc gaagccacac caggcgtaac agccaccgaa
     7981 ctgaaaatcg gcaacaccgc cgcctacagc ggccccgcgt cggcctacgg catcatcgcc
     8041 cgcaccgagg ccgccgtgtt caagatgatc aacgagcaag gcggcgtcgg cggccggaag
     8101 atcgtctatg actcggtgga tgacggctac agcccgccga aaacggtgga ccaggtgcgg
     8161 cgcctggtgg aacaggacga agtcgccttc atcttcgcca ccatcggcac gccgtcgaac
     8221 accgccat
//
LOCUS       DATAVD010000719         2938 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2114636, whole genome shotgun sequence.
ACCESSION   DATAVD010000719 DATAVD010000000
VERSION     DATAVD010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2938
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2114636"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..227)
                     /gene="vapB"
                     /locus_tag="VHX39_13540"
     CDS             complement(<1..227)
                     /gene="vapB"
                     /locus_tag="VHX39_13540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapB family
                     antitoxin"
                     /protein_id="HEX3992190.1"
                     /translation="MLMATAKVFWSGRSQAVRLPKEFRVEGDEVRIRREGRSIILEPL
                     QNDWAWLDTLVRETAASGCFNDEFLKATEAE"
     gene            348..1493
                     /locus_tag="VHX39_13545"
     CDS             348..1493
                     /locus_tag="VHX39_13545"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxide hydrolase"
                     /protein_id="HEX3992191.1"
                     /translation="MAPQSFTLKVSDVAIADLKTRLSLTRFPDAAPGEPWAFGTSVEY
                     ARELVSYWHDRFDWRAQEAALNEFPQFKTPLHDIDLHYLHVPGVGPNPYPLLLLHGWP
                     GSVYEFLDIIPRLTDPARFGGNPNDAFTVIAPSLPGYGLSFKPGQKRFTLQDIAACVH
                     DLMTQTLGYQKFAVQGGDWGAGTASLIGSRYPESVCGIHVNLLFVPRDRPDGELSREA
                     KRYADDLAHWLREETGYQQIQGTKPQTLAFALTDSPAGLAAWIAEKFRSWSDCDGLPE
                     NAISRDRMLANISLYWFTGAIGSSFWPYYGRLHTTWPISPANPITVPTGYAAFPKEIL
                     LPPRSIAAKTYTNIQRWTEMKKGGHFAAMEQPAALAGEIQNFFRPLR"
     gene            1511..2713
                     /locus_tag="VHX39_13550"
     CDS             1511..2713
                     /locus_tag="VHX39_13550"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3992192.1"
                     /translation="MAHDGLRFGIFLAPFHRVGDNPNLALQRDLELVQWLDHLGYDEA
                     WIGEHHSAGWETIASPEIFIGVAADRTRHIMLGSGVTSLPYHHPLMVAQRFVQLDHMT
                     RGRTMLGVGPGALVSDAYMMGIDPESQRRRMDESLGAIVALLEGKAPVTLKTDWFELK
                     EARLHLKPYTKGGFPIAVASVTTPAGWMAAGKYGCGILSIGAGVPGGPAKLADSWRMA
                     EAEAAKHGRRVSRDNWRLVINMHCAEDDETAMREVRVGERIETQKYFSETLGRPPMRS
                     ENPLQEGLAAATTLVGSPETIIDGINRMLAYTDGGAGAVLFRSHEWANREQTLRSYEL
                     FARWVMPRFQGSADSTLDSREWCSENRAGIFGPAMGALKKAFVDAGQEPPDMMRMRLH
                     TGKTEVAE"
BASE COUNT          559 a          971 c          848 g          560 t
ORIGIN      
        1 aactctgctt cggtcgcttt gaggaactcg tcgttaaagc agccggatgc tgctgtttca
       61 cgaacgagcg tatcgagcca ggcccagtca ttctgaagcg gttccaaaat gatcgaccgg
      121 ccttcccggc ggatccgtac ctcatcgccc tcgacgcgga actccttcgg cagccgcacc
      181 gcctgcgacc gcccggacca gaagaccttc gctgtcgcca tcagcatgcc tccatgatat
      241 atagcattga tatatagcat ccaactccgg ggtcaaccaa ttgccaccct tgaccgcgct
      301 cgaacgccat ggcccttgca cagccaggcc cacaaaagga ccctgccatg gccccccaat
      361 ccttcaccct caaggtctcg gacgttgcga tcgccgacct gaagacccgc ctctctctca
      421 cccgcttccc cgatgctgcc cccggcgagc cctgggcttt tggcaccagc gtcgagtacg
      481 cccgcgaact tgtcagctac tggcatgatc gtttcgactg gcgtgcgcag gaagccgcgt
      541 tgaacgagtt cccgcagttc aaaaccccgc tgcacgacat cgatctgcac tatctccacg
      601 ttcccggcgt cggtccgaac ccgtatccgc tgctgctgct gcatggctgg cccggctcgg
      661 tctacgagtt cctcgatatc attccgcggc tgaccgaccc ggcccgattc ggcggcaatc
      721 ccaatgacgc cttcaccgtg atcgcaccgt cgctgcccgg ctacgggctg tccttcaagc
      781 cgggtcagaa acggttcacg ctccaggaca tcgcggcctg cgtgcacgat ctgatgacgc
      841 agacgctcgg ttaccagaaa ttcgccgtcc agggcggtga ctggggagcc ggtactgcct
      901 cattgatcgg atcgcgctac ccggagtcgg tctgcggcat ccatgtcaac ctgctgttcg
      961 tgccgcgcga caggcctgat ggcgagctct cgcgggaagc caaacgctac gccgacgacc
     1021 tcgctcactg gcttcgggag gaaaccggct accagcaaat tcagggcacc aaaccgcaaa
     1081 ccctggcgtt tgcactcacg gattccccgg ctggcctggc cgcctggatc gccgaaaaat
     1141 tccgttcctg gtccgattgc gacgggttgc cggagaatgc catcagccgc gaccgcatgc
     1201 tggcgaatat ctcgctttat tggtttaccg gcgccatcgg ctcgtcgttt tggccctatt
     1261 acggcaggct gcataccacg tggccgatct cgcctgcgaa cccgatcacg gtgccgaccg
     1321 gctatgccgc gtttccgaag gaaatcctac tgccgcccag atcgatcgcg gcaaagacct
     1381 acaccaacat ccagcgctgg actgaaatga aaaaaggcgg gcacttcgcg gccatggagc
     1441 agcccgctgc actcgccggg gaaatccaga atttcttccg tccgctccgt taacaaaaag
     1501 gcactgcaac atggctcacg acggcttgcg cttcggcatt ttcctggcgc cgtttcatcg
     1561 ggttggcgac aaccccaacc tcgctctgca acgcgacctc gaactggtgc agtggctcga
     1621 tcatctcgga tacgatgagg cctggatcgg agaacatcac tctgccggct gggaaaccat
     1681 tgcctcgccg gaaattttca tcggtgttgc cgctgatcgg acccgccaca tcatgctcgg
     1741 ttccggcgtg accagtttgc cgtaccacca cccgctgatg gtcgcacaac gcttcgtgca
     1801 actcgaccac atgacccgcg gccgtaccat gctcggcgtc gggcccggcg cactggtttc
     1861 cgacgcttac atgatgggta tcgatccgga gtcgcaacgc cgtcgcatgg acgaatcact
     1921 tggcgcgatc gttgcgctgc ttgagggtaa agcgccggtc acattgaaga ccgactggtt
     1981 tgaactgaag gaagcccgcc tccacttaaa accctacacc aagggcggct ttcccattgc
     2041 ggtcgccagc gtgaccacgc cggccggctg gatggccgcc ggcaaatatg gctgcggcat
     2101 cttgtcgatc ggcgccggcg ttcccggcgg tccagccaaa ctggccgaca gctggcgcat
     2161 ggcggaggcg gaggcagcaa agcacggccg ccgtgtcagc cgcgacaatt ggcgcctcgt
     2221 catcaacatg cattgtgccg aggacgacga aaccgccatg cgcgaagtcc gcgtcggcga
     2281 gcgtatcgaa acccaaaagt acttttccga aactctgggc cgtccgccga tgcgcagcga
     2341 gaacccgttg caggaaggtc tcgccgccgc aacgacattg gtcggctcgc cggaaaccat
     2401 catcgacggc atcaaccgca tgctggccta cacggacggc ggcgcgggag cggttttgtt
     2461 ccgcagccac gaatgggcca atcgcgagca aacgttgcgc agttacgagt tgttcgcccg
     2521 ctgggtgatg ccgcgtttcc agggcagtgc cgactcgacg ttggactctc gagaatggtg
     2581 cagcgagaac cgggccggga tcttcggccc ggcgatgggc gcgcttaaga aagccttcgt
     2641 cgatgccggc caggagccac ccgatatgat gcggatgcgg ttgcacactg ggaagaccga
     2701 ggtggcggag taacgccgtg ggcgcggatc gatcaacacg gattgatccg cgccgcaatc
     2761 cggtttcggc atggcgtgtt tggcgcccgg gccagcgccc ctggtcttca cgatctaacg
     2821 gctggtcgac ccgtcccgag cctgcgatat cagtgacgag aggatattct tgacggtctg
     2881 tgaggacagc gcgttcctaa cgctgatgac gaagtcctct tcgttgttga tctccacg
//
LOCUS       DATAVD010000720         2526 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_997569, whole genome shotgun sequence.
ACCESSION   DATAVD010000720 DATAVD010000000
VERSION     DATAVD010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2526
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_997569"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..892)
                     /locus_tag="VHX39_13555"
     CDS             complement(104..892)
                     /locus_tag="VHX39_13555"
                     /inference="COORDINATES: protein motif:HMM:NF024863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HEX3992193.1"
                     /translation="MKSLLFVLIGVSAFGQAPAPTAADQPVSRTDQNSLTAHRQLLAK
                     AKAGGIDVYIEGDSIVRRWGATDYPQLLANWNQNFFGWNAADFGWGADTVQNILWRLD
                     NGELDGVNPKVIVLLGGTNNVGNRPPPEGQESARIVDITRGLTKVVETMRAKAPAATI
                     IVTAIFPRNDNMAVLPVIDGINANLAKLADGKKIRYLNINDKLADPQGKLRDGMLNTD
                     KLHPALPGYQVWADALKPIFTELLGPPAKTDHAPPPTGDPSAKR"
     gene            complement(889..2280)
                     /locus_tag="VHX39_13560"
     CDS             complement(889..2280)
                     /locus_tag="VHX39_13560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992194.1"
                     /translation="MSAQQAPNPTAAATAEDHQNMMDQLGIKALRPGPSGTETAPNHA
                     NYDEATANPFPNLPDVLTLKNGKKVTTPAMWWNQRRPEIVEDFDREVLGRVPKNVPKV
                     TWTVTRTTNAMVGNRAVIGKQLVGHVDNSIDPEITVDVQMTLVVPADAKGPVPVMIMF
                     GGGTALPGDPPPAGRGGRGGAPPPGPAAAAPPAVPADPPSTQQLIADGWGYASLNPTS
                     VQADNGAGLTKGIIGLVNKGQHRKPDDWGSLRAWGWGAARGLDYLETDKRVDAKHVGI
                     EGVSRYGKAALVTMAYDQRFAVVLIGSSGEGGAKLHRRNWGEAVENLTGSGEYHWMAG
                     NFLKYGAADATFGSKNPGDLPVDSHELIALCAPRLTFVSYGVPEKGDAKWLDHQGSFM
                     ATIAAQPVFRLLGAKDLGRTDDYHTEKMPAVNVALMDGQLAWRQHDGGHTDGPNWKYF
                     IPWVDKNIGRKPQ"
     gene            complement(2334..>2526)
                     /locus_tag="VHX39_13565"
     CDS             complement(2334..>2526)
                     /locus_tag="VHX39_13565"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEX3992195.1"
                     /translation="FIRTPGNFDAMVDFDKVIQDPASPRQFKQGYNNTDKLHPNDTGY
                     KAMADAVDLSIFTAKGAKR"
BASE COUNT          410 a          757 c          835 g          524 t
ORIGIN      
        1 tagacgcact ccgcctgact tcgtttactt atttctggga caggagacta gagtggttga
       61 tccgcgcgga atcccgtccc tccccgtgtg tctagggcta ctgttagcgc ttcgcgctgg
      121 ggtcgcccgt gggcggaggg gcgtgatcgg tcttcgcggg cgggcctagg agttcggtga
      181 agatcggctt cagagcgtcg gcccagacct ggtagcccgg caacgcggga tgcagcttgt
      241 cggtgttcag catgccgtcg cgcagcttgc cttgcgggtc ggccagcttg tcgttgatgt
      301 tcaggtagcg gatcttcttt ccgtcggcga gcttggccag attcgcgtta attccgtcga
      361 tcacgggcag gaccgccatg ttgtcattgc gcggaaagat ggctgtgacg atgatagttg
      421 ccgcgggcgc cttggctcgc atggtctcga ccactttggt aagcccgcgg gtgatgtcga
      481 cgatgcgcgc ggattcctga ccctcgggcg gcggccggtt gccgacgtta ttggtgccgc
      541 cgagcagcac gatcaccttg ggattgacgc cgtcgagttc gccgttgtcc agccgccata
      601 aaatgttctg gaccgtatcg gcgccccacc cgaaatcggc ggcattccag ccgaagaagt
      661 tttggttcca gttggcgagc aactgcggat aatcggtggc gccccagcgg cgcacgatgg
      721 aatcgccttc aatgtacacg tcgatgccgc cggctttcgc tttcgcgagc agttgccgat
      781 gggccgtgag cgaattttga tcggttcgcg aaaccggttg atcggcggcc gtcggcgcgg
      841 gcgcctgccc aaatgccgac accccgatca aaacgaataa gagcgacttc actgcggctt
      901 gcggccgata tttttgtcga cccaggggat gaagtacttc cagttgggac cgtcggtgtg
      961 gccgccgtca tgctgccgcc aggcgagctg gccatccatc aacgcgacat ttacggcggg
     1021 cattttctcg gtgtgatagt cgtcggtgcg gcccaggtcc ttcgcgccca gcaggcggaa
     1081 aaccggctga gccgcgatgg tggccatgaa gctgccctga tgatccagcc atttcgcgtc
     1141 gcccttttca ggcacgccat agctgacgaa ggtgaggcgc ggcgcgcaga gtgcgatcag
     1201 ttcatgcgag tcgacgggaa ggtcgccggg gttcttgctt ccgaaggttg cgtccgccgc
     1261 cccgtacttg aggaagttgc cggccatcca gtgatactcg ccggagccgg tcaggttctc
     1321 caccgcctcg ccccaattgc ggcgatgcag cttcgcgccg ccctcgccgg aggagccgat
     1381 gagaacgacg gcgaagcgtt ggtcataagc catggtcaca agggcggctt tgccgtagcg
     1441 cgaaacgcct tcgatgccga cgtgcttggc gtcgaccctc ttgtcggttt caagataatc
     1501 gagaccacga gccgcgcccc agccccaggc ccgcagcgag ccccagtcgt caggcttgcg
     1561 atgctggcct ttgttgacca ggccgatgat gcctttggtc aggcccgcgc cgttgtcggc
     1621 ctgcacgctg gtcggattaa gagaagcgta gccccagccg tcggcgatca actgctgcgt
     1681 cgatggcgga tcggcgggaa ccgctggagg agccgcggct gccgggcctg gaggcggagc
     1741 gccaccgcgt ccaccgcgcc ctgccggcgg cggatcgccc ggcagcgccg taccgccgcc
     1801 gaacatgatc atcaccggaa cgggtccctt cgcatccgcc ggaaccacca gggtcatttg
     1861 aacgtcgacg gtgatttcgg gatcgatcga attgtcgacg tgccccacca actgcttgcc
     1921 gatcaccgca cgattgccca ccatggcgtt ggtggtgcgg gtaacggtcc aggtaacttt
     1981 gggaacgttc ttgggtacgc ggccgagcac ctcgcgatcg aaatcctcga cgatttccgg
     2041 acggcgctgg ttccaccaca tcgccggcgt ggtcaccttc ttaccgttct tcagcgtcag
     2101 aacgtcgggc agattgggga acgggttcgc cgtggcctcg tcataattgg cgtgattggg
     2161 cgcggtctcc gtgccgctgg ggccggggcg cagggctttg atgccgagtt ggtccatcat
     2221 gttctgatgg tcttccgcgg tggccgccgc ggtgggattc ggcgcctgtt gcgcggacaa
     2281 cagagcaccg caaaacagaa cagccggaag tgcgcgggtg tgaacagtca tggttaacgc
     2341 tttgcccctt tcgcggtaaa gatggacaga tcgaccgcgt ccgccatggc cttgtagccc
     2401 gtgtcgttgg gatgcagttt gtcggtgttg ttatatccct gcttgaactg gcgcgggctg
     2461 gcggggtcct ggatgacttt gtcgaaatcc accatggcgt cgaagttgcc gggcgtgcgg
     2521 ataaat
//
LOCUS       DATAVD010000721         2981 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1185183, whole genome shotgun sequence.
ACCESSION   DATAVD010000721 DATAVD010000000
VERSION     DATAVD010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2981
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1185183"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..692)
                     /locus_tag="VHX39_13570"
     CDS             complement(<1..692)
                     /locus_tag="VHX39_13570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992196.1"
                     /translation="MFARLETGLLFPVACSVVSEFGPLRNWVNQHVVGPLVPLAFRIG
                     IPNQAVFWAGMAIATILPFMMLMVATDRFMTIRKGFAFLAIVAIAIWTVTAGRSPSVV
                     AEYLPEPYLRQINWLSAGQKAAITVAGLTLLLHLKALWTGLRDKGEVAESLIEEYQAY
                     QYRRRNGSDEHDVYSRQTAGFRGWHVQKEYAGLGAGPREHPAVQFLYGVVWAGLIGVM
                     SFAYLMWYGVPG"
     gene            complement(815..1477)
                     /locus_tag="VHX39_13575"
     CDS             complement(815..1477)
                     /locus_tag="VHX39_13575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019089025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein tyrosine phosphatase"
                     /protein_id="HEX3992197.1"
                     /translation="MFKGDLQTAQGRVVAWIDSLFVDHAILRLVHSNFGTVIPGKLYR
                     CNHPTPMLIRRLTRRFGLTTVINLRGETGTGSYHLSRDAALAAGLEYHDLAMESRGAP
                     HRDRILRLLEIYRALPGPALLHCKSGADRAGLAAGLCLLFEGGSANDALRQLSWRYGH
                     IKQARTGILDAFFLRYQRDAEGRKPFLEWLDQDYDEAALRRDFHANGLASFINDWVLV
                     HE"
     gene            complement(1522..2151)
                     /locus_tag="VHX39_13580"
     CDS             complement(1522..2151)
                     /locus_tag="VHX39_13580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding negative transcriptional regulator"
                     /protein_id="HEX3992198.1"
                     /translation="MYVPAHFADDRIPVLHDAIRASGLATVVSLTSDGLIASHVPLML
                     DPEPAPYGKLIGHFARPNPQAREAIGDALAIFLGPEGYITPSYYATKRQTGKVVPTWN
                     YTAIHAYGPLRFIDDRAELLDIVTRLTGRHEGQRAEPWAVTDAPADFVQGMLNGIIGF
                     ELVITRLEGKRKMSQNRPAADQAGVVAGLREDGRPDLAALVADVPERTA"
     gene            2367..>2981
                     /locus_tag="VHX39_13585"
     CDS             2367..>2981
                     /locus_tag="VHX39_13585"
                     /inference="COORDINATES: protein motif:HMM:NF024430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3891 family protein"
                     /protein_id="HEX3992199.1"
                     /translation="MFREGPNGPIAISQPSHAWLSGQIMRAWGNAEFGAVTPFEDVCL
                     GAEQHDIGWLEWERSPTLNPATGRPHGFRELGVSAHTAIWRRGTELALTFGRYPALLV
                     SLHGTGLYANFAGAVADAAIVREFLSGQVAIQQRLTASLRLDQRLGEGCDPAMIERNR
                     RLVRTADRMSIAICTGMQDLAVRTDDPREGVVRQVPTAGGETDIH"
BASE COUNT          575 a          932 c          941 g          533 t
ORIGIN      
        1 aagcccggca cgccgtacca cataaggtag gcgaagctca tgacccctat cagcccagcc
       61 cagaccacgc cgtagaggaa ctgaacggcc ggatgctcgc ggggaccggc gccaagtccg
      121 gcgtactctt tctgtacatg ccagccccga aaaccagcgg tctgccggct gtacacgtcg
      181 tgctcgtcgg atccgttgcg cctccggtat tggtaggcct gatattcctc gatcaggctc
      241 tcggccacct cgcccttgtc acgcagtccg gtccacaacg ctttcaggtg cagcaacaat
      301 gtcaggcccg ccacggtgat ggcagccttc tgaccggccg acagccaatt gatctggcgc
      361 agatagggct cgggcaagta ttccgcgacc actgaagggg accggcccgc tgtcacggtc
      421 caaatcgcaa ttgcgacaat ggccagaaac gcaaaacctt tgcggatcgt catgaagcgg
      481 tcggtggcaa ccatcaacat cataaatggc aggatcgtgg cgatcgccat gccagcccag
      541 aagactgcct ggttcgggat gccgatacgg aaagccagcg gcaccagagg cccgaccacg
      601 tgttgattga cccagttccg cagcggcccg aactcgctga caacgctgca ggccaccgga
      661 aacagcaatc cggtctcgag acgcgcgaac accggccatc ggaccgtaaa caattgagcc
      721 attgatgaaa tctctctggg ccgccttcca attccttaca agcaggtgtc ctgcaaaatg
      781 gtaacgaact gactttccgc cggcgcaccg gatactattc gtgcaccagg acccagtcgt
      841 tgatgaaact cgccagtccg ttggcgtgga aatcgcgccg caatgcggcc tcgtcgtagt
      901 cctggtcgag ccattccagg aatggcttgc ggccttcggc gtcccgttgg taacgcaaga
      961 agaatgcatc gaggatgccg gtccgggcct gtttgatatg cccgtagcgc caggagagtt
     1021 gccgtaacgc atcgtttgcc gagccgccct cgaacaacag gcacaagccc gccgccagtc
     1081 ccgcccggtc cgcgccggac ttacaatgca gcagggccgg accaggcagg gcgcggtaaa
     1141 tctccagcaa tcgcaggatg cggtcgcgat gcggcgcgcc ccggctttcc attgccagat
     1201 cgtgatattc cagacccgcc gcaagagccg cgtcacggga gaggtgatac gaaccggtcc
     1261 ctgtctcgcc gcgtaaattg atcaccgttg tcagcccgaa gcgccgggtc agccggcgga
     1321 tcagcatcgg tgtcggatga ttgcagcgat atagcttgcc gggaatgacg gtgccaaagt
     1381 tgctgtgcac cagtcgcaaa atcgcatgat cgacaaacaa cgaatcaatc cacgcaacca
     1441 cgcggccctg ggcggtctgc agatcgcctt taaaaatcga gtccatcgat tctggaaacg
     1501 ttccccgcca accgttcccg attatgccgt gcgttccggc acatcggcaa ccagagcagc
     1561 caggtccggc ctgccgtctt cccgcagacc cgcgaccacg cccgcctgat cggcggcggg
     1621 ccgattctga ctcattttgc gcttgccctc gagccgcgtg atgaccagct cgaacccgat
     1681 aatgccgttc agcatgccct gcacgaaatc ggccggagca tccgtgaccg cccatggctc
     1741 ggctcgctgg ccctcgtgac ggccggtgag gcgcgtgacg atgtccagca attcggctcg
     1801 gtcgtcgatg aagcgcagcg gcccgtaggc atggatggcg gtgtaattcc aggtcggcac
     1861 gactttgccg gtctggcgct tggtcgcgta gtacgacggc gtgatgtagc cctcagggcc
     1921 gaggaaaatg gccagcgcat cgccgatcgc ctcgcgcgcc tgcggattgg ggcgggcgaa
     1981 gtggccgatc agcttgccat acggcgctgg ttccgggtcc agcatcagcg gcacatggct
     2041 tgcgatcagc ccgtcgcttg tcaggctgac caccgtcgcg aggccgctgg cgcggatcgc
     2101 gtcgtgcagg acggggatgc gatcgtcggc gaagtgagcg ggcacataca tggcgcaggt
     2161 ccaaggtcct ggtgaaacgg ggtgatagcg ataggcggcg tgctgcgccg gaacaagacc
     2221 ggccagatcc ggaggccgac cctccagctt aaccggattg cgatcggggt cgtcaaatcg
     2281 gccgtctggt gcgagagttt ccgggctgct ttgggtcgct acccacctct ggcacatatc
     2341 agtgatgcaa ggggacctgg accgtgatgt tccgtgaggg cccgaacggg ccgattgcca
     2401 tctcccaacc gagccatgcc tggctctccg gccagatcat gcgcgcctgg ggcaacgctg
     2461 agtttggcgc cgtcacacca ttcgaggacg tctgtctggg cgccgaacag cacgacatcg
     2521 gctggctgga atgggagcgg tcgccgaccc tgaacccggc caccgggcgc ccacatggat
     2581 ttcgggaact cggcgtttcc gcgcatacgg cgatctggcg gcggggaacg gagctggcgc
     2641 ttacctttgg acgttacccc gcgctgttgg tgtcgctgca tggcaccggg ctttatgcga
     2701 acttcgctgg tgctgtggcg gatgcggcaa tcgtgcggga gtttctaagc gggcaggtgg
     2761 caatccagca acggcttacg gcaagcctgc ggttggatca gcgtctgggc gagggttgcg
     2821 acccggcaat gatcgagcgc aaccgccgtc tggtgcgaac ggcggatagg atgtcgattg
     2881 cgatctgcac cgggatgcag gacctggctg tccgaacgga tgacccgcgt gagggtgtgg
     2941 tcagacaggt tcccactgcg ggcggcgaga ccgatatcca t
//
LOCUS       DATAVD010000722         5343 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3419319, whole genome shotgun sequence.
ACCESSION   DATAVD010000722 DATAVD010000000
VERSION     DATAVD010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5343
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3419319"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            188..1180
                     /locus_tag="VHX39_13590"
     CDS             188..1180
                     /locus_tag="VHX39_13590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3992200.1"
                     /translation="MVEVNHRTIETNNIRMHVAEKGSGPAVVLCHGFPESWYSWRHQI
                     EALAAAGFHVIVPDMRGYGQTDSPAGIDQFTLLHLVGDIVGLLDAFGVETAVIAGHDW
                     GAPVAWHAALLRPDRFRAVIGLSVPYRPRGTVRPTTVMPQTADAIFYQLYFQPPGVAE
                     AEFERDVRASLRSVVLSVAGETPARQDGNAITDNFSMIPRDGGILGRIVRDASDPAPL
                     PAWITDADIDFYAGEFSRAGFRGGLNWYRNVDRNWELLSPFAGARVTVPALYVVGQRD
                     LVLGFPGARELVANLPRLVPQLRETKILPGCGHWTQQERPDEVNRAMLDFLNSL"
     gene            1299..2606
                     /locus_tag="VHX39_13595"
     CDS             1299..2606
                     /locus_tag="VHX39_13595"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992201.1"
                     /translation="MDATTIERSTMRKAYLRLVPFRFVLYILCYIDRINVSFAALTMN
                     GDLGLTAHIYGLAAGAFFWGYCLLEIPSNIILERVGARPWITRIMITWGLCSAATAFA
                     TGPWSFFGIRVLLGIAEAGLFPGLILYFHRWFPQRHRGRVVGWFLTGLPLATAIGGPL
                     ATALLQLDGVLGLHGWQWVFIGEGVPTILIGLSVMWVLTERPSQATWLTDAEKSWLEA
                     ELAHEKHAVESVRSHSILSAMIDPRVVAFTVIFAGVGMSGVGLVLFLPQILKSLGLSN
                     TQAGLLTSVPYVFGTLAIIGFGQLSDRIGDRFWILVGTCACGAVGMAIGGVLHNSIWV
                     LAGFSLATVGFYGMKSPFWPLPSTVLSGPALAAGLAYINSVGNFCGYIGPIVVGYTKD
                     ATGSFEAGIYVLALSSLVSTLTALGCALWMKLPRANVAPLIVG"
     gene            2779..3963
                     /locus_tag="VHX39_13600"
     CDS             2779..3963
                     /locus_tag="VHX39_13600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HEX3992202.1"
                     /translation="MAGKRDKKNSGRAVVIIKRMGDGGGGGHHGGAWKVAYADFVTAM
                     MAFFLLMWLLNATTEDQRKGLADYFSPNSQLSHASSGTGQPFGGHTAFDEGAMVSDRG
                     AVEINEGKRPPLNATVNGDPQVLTSAQKRAEDTDTGATDSPPDPEADEPVAAGRFRSN
                     AAQGQDGDRQPNRAEIQAEKDRQEKVAFARTADEIRAAVAGDPALAELAKQLSIDMTP
                     EGLRIQIMDEDKLPMFATGSAAPNDRARALIQKIAPFVQKLPEAISIAGYTDAAPYSG
                     SGKTNWELSSERANATRRLLTDNGLADNRIRTVTGHADRDPLVPGDPLAAANRRIAIV
                     VLRNANAATPLERGPTQSAPAPQPADHAPPPTDHASRAADTTAPSLKPADHASRLADP
                     AH"
     gene            3977..4840
                     /gene="motA"
                     /locus_tag="VHX39_13605"
     CDS             3977..4840
                     /gene="motA"
                     /locus_tag="VHX39_13605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HEX3992203.1"
                     /translation="MLTLGGFGFVLICVFGSYLASGGSVAPLVEALPFEMWTIAGAAA
                     GAFIMSNSMTEVKHTLTGFGKIIKGGCYKKTDYVDLLSLMYHLVRLASTKGNMALEPH
                     IEKPDESSAFQKFPKIIANHHACNLICDYLRLVGMNADDPNQIEDVMARELRKTLNEE
                     LHPSHALQSMADGLPALGIVAAVLGVIKTMSHIDQPPAILGAMIGGAMTGTFLGVLLS
                     YGMVGPFASRLQGVVEEEAKYMEVIRAVIVTHLHGNAPQVSIESGRKMVPNEHMPSFQ
                     EMEEAIEQVKI"
     gene            5007..>5343
                     /locus_tag="VHX39_13610"
     CDS             5007..>5343
                     /locus_tag="VHX39_13610"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3992204.1"
                     /translation="MHDTVIRGGTIVDGSGQPGYTGDVALEDGKIAQVGGKVGPGKRE
                     IAADGLVVTPGWVDVHTHYDGQAMWDSELAPSSWHGVSTVLFGNCGVGFAPVRNTDHS
                     ALIGMMESIE"
BASE COUNT          973 a         1606 c         1699 g         1065 t
ORIGIN      
        1 caaccatccc cgggcgactg gcaatcggtc gtcaattcgg tggtcgcact gctctcggcg
       61 tgaatgctcc gatggcactt gcaaggctcc gcccgttgtg gcccaacgga gagcattgcc
      121 ggcgtactgt cacctgatcc aatgacgggc caggcccagt tcgtgctggc tgatcgcggg
      181 tgaggtcatg gtcgaggtca atcaccggac tatcgaaacc aacaacattc ggatgcacgt
      241 ggccgagaag ggcagcggtc cagcggtcgt cctgtgccat ggttttcctg aatcctggta
      301 ttcatggcgc caccaaatcg aagccctcgc cgcagcgggg ttccatgtca ttgtgcccga
      361 catgcgcggc tacggccaaa ccgacagccc agccggcatt gaccagttca ccctgctgca
      421 tctggtgggt gacatcgttg ggctgttgga tgcgttcggt gtcgaaacgg cagttatcgc
      481 cggccatgac tggggcgcgc cggtggcctg gcacgccgca ctgctgcgtc cggatcggtt
      541 tcgtgccgtg atcggcctga gcgttccgta ccggccgcga ggaactgtgc gcccgacgac
      601 cgtgatgccc caaaccgcag atgcgatctt ctatcagttg tacttccaac cgccgggcgt
      661 cgccgaagcg gagttcgaac gcgacgtccg cgcatcgctc cgcagcgtgg tactctcggt
      721 cgcaggagag acgccagccc gccaggacgg caatgcgatc acggacaatt tcagcatgat
      781 cccgcgtgac ggcggaatac tgggccgcat cgtccgagat gcgagcgacc ctgcgcccct
      841 gcccgcatgg atcaccgatg ccgacatcga cttctacgcc ggggaatttt cccgcgccgg
      901 gttccgcggc ggcctgaact ggtatcgcaa tgtcgatcgc aactgggaac ttctgtcgcc
      961 gttcgccgga gcgcgcgtga ctgtcccggc gttgtatgtc gtcggtcagc gcgacctcgt
     1021 acttggcttt ccaggtgcca gggaactcgt tgccaatctg ccgcgattag tcccgcagct
     1081 gcgcgagaca aagattttgc caggctgcgg ccattggacc caacaagaac ggccggacga
     1141 ggtcaatcga gcgatgctcg acttcctcaa ttcattgtga cgcaaattaa agtttaccgg
     1201 ctcactccat accgcgcgag ggacggccgg aacttgccgc acaggctgaa atcaggctga
     1261 ctgcccgagc cggcgacgac cggtgcgggg agaaaacgat ggacgccacg acaattgaac
     1321 gctcgacgat gcgcaaagcg tatctccggc tggtaccttt tcgcttcgta ctttacatcc
     1381 tttgctacat cgatcgcatc aatgtcagct ttgccgccct gaccatgaac ggcgatctgg
     1441 gtctgacggc gcacatctac ggtctcgccg ccggtgcgtt cttctggggt tactgcctgt
     1501 tggaaatccc ttccaacatc atcctggagc gcgtcggcgc gcggccttgg atcacccgca
     1561 tcatgattac ctggggcctg tgctcggccg cgaccgcgtt cgccaccggt ccctggagct
     1621 tcttcggcat tcgtgtgctg ctcggcatcg ccgaggcagg actgttccct ggcctcatct
     1681 tgtattttca ccgctggttc ccgcagcgcc atcgtggccg cgtggtcggc tggttcctga
     1741 ccgggcttcc gctggccact gccatcggcg gtccgctggc caccgcgctc ctgcaactgg
     1801 acggcgtact gggcttgcac ggctggcagt gggtcttcat cggtgaaggc gtgccgacga
     1861 ttttgatcgg cctctctgtg atgtgggtgc tgaccgagcg gccgtcacag gcgacgtggc
     1921 tgaccgatgc cgagaaatcc tggctcgagg ccgagctggc ccatgagaaa catgcagtcg
     1981 agtcggtgcg ctcacattcg atcctgagtg cgatgatcga tccgcgggtg gttgccttta
     2041 ccgtgatctt cgccggcgtc ggcatgtcgg gcgttggcct cgtgctgttc ctgccgcaga
     2101 ttttgaagag tctggggctg agcaatacgc aggctggctt gctgacgtca gtgccgtacg
     2161 tgttcggcac actggcgatt atcgggttcg gccaactgtc cgaccggatc ggcgaccggt
     2221 tttggatttt ggtcggcacc tgcgcctgtg gcgccgtcgg gatggcgatc ggcggggtgt
     2281 tgcataacag catttgggtg ctggccggtt tctcgctggc cacggtcggt ttctatggca
     2341 tgaagtcacc gttctggccg ctgccgtcga cggttctgtc cggcccggca ttggccgcag
     2401 gtctggccta cattaattcg gtcggtaact tctgcggcta tatcggtccg atcgtggtcg
     2461 gctatacgaa agacgcgacc ggtagctttg aggcgggcat ttacgttctc gcgctgtcgt
     2521 ctctggtgtc cacgctgacc gcgcttggct gcgcgctttg gatgaagctg ccgcgagcga
     2581 atgttgcccc tttaatcgtt ggttaacctt atccgatcat ggtggtttcg tgtcctgctc
     2641 ccggtatttg tcacattgtg acgaataccg gggacgtcag gccatgcgcg acacagggct
     2701 ggtgtccgat gccaggatcg ctcgtttagc aacgaacacc cgacacggac ctccggcgca
     2761 caagaggcac cgggtgagat ggcgggtaag cgggacaaaa agaactccgg tcgcgcggtc
     2821 gtcatcatca agcggatggg cgacggaggc ggcggcgggc accacggcgg tgcgtggaaa
     2881 gtggcgtatg ccgatttcgt aacggcgatg atggcgttct tcttgctgat gtggctgctg
     2941 aacgcgacga cagaagatca gcgcaagggc ctcgccgact atttcagccc gaacagccag
     3001 ttgagccatg cctcatccgg taccgggcaa ccctttggcg gtcataccgc gttcgatgag
     3061 ggcgccatgg tctctgatcg tggcgcggtc gagatcaacg agggcaagcg tccgccgctg
     3121 aacgcaaccg tcaacgggga cccgcaggtc ctcaccagcg cccagaaacg cgccgaggac
     3181 accgacaccg gggccacgga ttcccctccc gatccggagg cggacgagcc ggtagccgcg
     3241 ggccggttcc gcagcaacgc cgcgcagggg caggacggcg accggcagcc caaccgggcc
     3301 gaaattcagg ccgaaaagga ccgccaggag aaggttgcct ttgccaggac cgccgatgaa
     3361 attcgcgccg cggtggccgg tgatccggca ctggcggagc ttgcgaaaca actgtccatc
     3421 gacatgacac cggagggttt gcggatccag atcatggatg aggacaaatt accgatgttc
     3481 gcgaccggtt cggcggcgcc aaacgaccgg gcacgcgctt tgatccagaa aatcgcaccg
     3541 ttcgtgcaga agttgccgga agcgatttcc atcgctggct ataccgacgc agcaccctat
     3601 tccggttcgg gcaagaccaa ctgggaattg tcgagcgagc gtgccaacgc gacccggcgc
     3661 ctgctgacgg acaacggtct ggcggataac cgcatccgta ccgtaaccgg ccatgccgat
     3721 cgcgatccgc tggtgcccgg cgatccgctg gcggcagcga accggcgcat tgcgatcgtg
     3781 gtgctgcgca acgccaatgc ggcaacgccg ttggaacgtg ggccgacgca gtctgccccg
     3841 gcaccgcagc ccgccgatca tgcgccaccg ccaacggacc acgcgtcgcg cgccgccgat
     3901 acgaccgcgc cctcgctgaa acccgcagat cacgcgtcac gcctcgcgga tccggcgcac
     3961 tgactgtggc cttaccatgc tgacacttgg cggcttcggc ttcgtgctca tctgcgtctt
     4021 tggcagctac ctggcgtcgg gcggcagtgt ggcaccattg gtcgaagcgc taccgttcga
     4081 gatgtggacg atcgccggcg cggcagctgg cgcttttatc atgtcgaact cgatgactga
     4141 agtgaagcac acgctgaccg gcttcggcaa aatcatcaaa ggtggctgct ataagaagac
     4201 cgattatgtg gacctgctca gtttgatgta tcacctggtg cggctggcca gcacaaaagg
     4261 caacatggcg ctggaaccgc acatcgaaaa gcctgacgaa agttcagcgt ttcagaaatt
     4321 cccgaaaatt atcgccaatc atcacgcgtg caatctgatc tgtgactatc tgcgattggt
     4381 cggaatgaat gccgacgatc cgaaccagat cgaagacgtc atggcccggg agttgcggaa
     4441 gaccctgaat gaggaactgc atccatcgca cgcgctgcag agcatggcgg atggtctgcc
     4501 ggcgcttggg attgtcgccg ccgtactggg cgtgatcaag acgatgtcgc atatcgacca
     4561 accgccggcg attctcggcg cgatgatcgg cggtgccatg accggcacct ttctgggtgt
     4621 gctgctgtcc tatgggatgg tcggtccgtt cgccagccgc ctgcaagggg ttgtcgagga
     4681 agaagcgaaa tatatggaag tgattcgtgc cgtgatcgtc actcacctgc acggcaatgc
     4741 accgcaggtc agtattgagt cgggccgcaa gatggttccg aacgagcaca tgccaagttt
     4801 ccaggagatg gaggaagcca tcgagcaggt taagatctga cctcgtgggc aggtcgcatg
     4861 gaccgatcgg aactgctcgc attcaggccg gctcggtacc gcagcgttac cgctttccag
     4921 gacatgggct gatcgcgcag caacttgacc gcgggccgcc gacggtctgt catggctcca
     4981 acgaatgagt ctcaaggagc atgtcgatgc atgacacggt gatccgcggc ggtacgattg
     5041 tcgatggttc cggccagccc ggttacaccg gcgatgtcgc gttggaggat ggcaagatcg
     5101 cccaggttgg cgggaaggtt gggccgggga aacgagaaat cgccgccgat ggattggtgg
     5161 ttaccccggg ctgggtcgat gtgcatacgc attacgacgg ccaggcgatg tgggattccg
     5221 aactcgcgcc gtcgtcctgg catggtgtca gcacggtgtt gttcggtaac tgcggtgtcg
     5281 gctttgcccc cgttcgcaat acggatcatt ccgccctgat cggcatgatg gaatcgatcg
     5341 agg
//
LOCUS       DATAVD010000723         6492 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_254588, whole genome shotgun sequence.
ACCESSION   DATAVD010000723 DATAVD010000000
VERSION     DATAVD010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6492
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254588"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..921)
                     /locus_tag="VHX39_13615"
     CDS             complement(<1..921)
                     /locus_tag="VHX39_13615"
                     /inference="COORDINATES: protein motif:HMM:NF017215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX3992205.1"
                     /translation="MRGEIGVDIGGTFTDVVCRLADGTVRFAKIPTTSGDPSRAVLAA
                     LQMAQQDWGVAAADITRFVHGTTVATNAVLERKGARIGLIMTEGFRDVLEIGRQMRHQ
                     MYDLVLQPETPVFLAPGRFRKEITERLDAKGNTLIALDEASVVRAIEELIALDVRAIA
                     VCLVFAFLNPAHERRIRDVIHALHPDLMVSLSSDVDPAFREYERTCVTAFDAYIKPVV
                     VDYLINLEQGLEAARVTVPLQMMQSRGGLMSSSVARQRPVRLFLSGPAAGVIGGVETA
                     RTAGYSDVITVDIGGTSCDIALITNHAPLIR"
     gene            1027..2004
                     /locus_tag="VHX39_13620"
     CDS             1027..2004
                     /locus_tag="VHX39_13620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992206.1"
                     /translation="MANLPLILTAADYARLMPLATGMVQPDGIDLTLLLGQSGSWTER
                     ATMLRRALNDPVVHGGEASMAGHLRRVEAGDRSHVALPVFPLRNFTARDLYVRKDGKV
                     RTAADLIGKRVGMYDWVASGSIWYRHLLHFIGIDPASLQWWIGEVDEPRITNHVYTLP
                     DGVHATGPGQSLSEMLIAGELDAVFSPPKPRKYHATNGPIARLFPDFRAIERDYFGQT
                     GIFPPQHLIVVRRPVWESNKWIARALTDAFIRGNDMFDAAQRGFPYVSPWLEAELEET
                     EAVMGTDFHPYGFEKSRRTIEVFANQAFDLGIVGRRISAEEYFADFLAS"
     gene            2073..3632
                     /locus_tag="VHX39_13625"
     CDS             2073..3632
                     /locus_tag="VHX39_13625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3992207.1"
                     /translation="MTIDRRSLLTAAGAALVPGFPRGASAAAGKNFVTANNSAYDTLD
                     PHVVFDIGRIATRLNMYDCLVRWVDNPPKLQLWLAEKIDIAPDAVTYTVTLKPGAIFH
                     DGAPVTADDVVFSMERILAMKQGAYGLFKGVVDAGKTRALDARTVQFTLNQPYAVFTS
                     ILAELWVVNSKLLRASEKSGDRGAAWLARNEAGSGGFKLHRYDPAIGFQADRFDGHFA
                     GFGQSNISQMEFRVVLETASRSLGLQKGEFNTTDGYLPQDQIRHLRQTDSVQILEAPS
                     LRTMYFIIHNQRPPLDDVNLRRALCYAFDYDGFINNILSGSVSRNAGIIPANLWGAPK
                     DLQGYAYDLDKAKQHLAMVKGPLRPLEIGVLAGFDQSEAAAQLLQAGCAKLGIEVKLN
                     SEPWPVISGKFADKEKMHDLVPLWRSAYFADPHNWTGYMYNSRNIGAGNASFYKNPRF
                     DELTDKALVLTSQAERQPLYEEASRILVDDAAGLFIYNTKWFGPFTKNVQNVRFCPIG
                     DAQDIRWMSMT"
     gene            complement(3633..4595)
                     /locus_tag="VHX39_13630"
     CDS             complement(3633..4595)
                     /locus_tag="VHX39_13630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX3992208.1"
                     /translation="MPPTLELLDLHTHFPLRNAWGKRTGWLRAVDGVSLSVARGEILG
                     VVGESGCGKTTLGKTIAGIHRPSGGTILFEGHDISRLSPRQGRVLRRRLQYCYQDPGA
                     SLDPHWRIGRSLAEPLVIHANLSAAERWARVRDILAAVGLPERHLSLYPHEISGGQQR
                     RVGLARILMVQPGLVVLDEPTSGLDVSVQAIVLRLLFDLRERFGLTYLFISHDLAVVR
                     LMAQRIAVMYLGRVVELGATDQIFTAPRHPYTQSLLASVPVAGGPRVSVDFALEGEPP
                     NPANKPSGCAFRTRCKQAKARCTDEEPLLRTLAGGLQVACHFAI"
     gene            complement(4595..5593)
                     /locus_tag="VHX39_13635"
     CDS             complement(4595..5593)
                     /locus_tag="VHX39_13635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3992209.1"
                     /translation="MGPDLLSIRDVSVSYLTENGTASVLDEVSLTLRRGEIMGLVGES
                     GCGKTTLARTILGALPRNARVRGTAIAFEDHDLLKIDPGEAEEDIRGRAITFVPQDPF
                     SAFNPLFTVGDQISELLRWKSPDREPLESGYNRTRRRIDRDRALTLLRLVQLPDPERL
                     LKKYPHELSGGQRQRVMIAMALLPEPRLVIADEPTTALDVTIQAQILMLLRKLAVERG
                     VSVLLTTHDLGTAWEICDRVTVMYAGQVLETAPIDAFFHAPGVPYTQLLLDSLPTGEA
                     PLRGIAGDVPNLVAAPAGCRFHPRCPGATQVCGAARPLAAQPRPDHWVRCHHGLLA"
     gene            complement(5583..6422)
                     /locus_tag="VHX39_13640"
     CDS             complement(5583..6422)
                     /locus_tag="VHX39_13640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3992210.1"
                     /translation="MKHFLRDRSAQFGLAIIILLVLCAVFAGLLAPYPQDVTAYHLPR
                     RLLGPSAVNFFGTDRMGADIFSRLLFGARLTILIAVVATSAAVLIGVPVGLVAGYYNN
                     RFSDLLMRVSDVFLAVPQIVLAIAIAQTLGPAIHNVILALSITYWPFWARLVYAETRS
                     VRNEVFIEAAVALGASPLRVMVLHVLPSIASSVIVRTTIGLGVTILVAAALGFLGLGP
                     PPPTPEWGRMVAESREFLPQAWWYAAAPGLAILLVVMGFNLVGDGLRDALDPRLSRGN
                     DGP"
BASE COUNT         1381 a         2027 c         1910 g         1174 t
ORIGIN      
        1 gcggatcagc ggcgcgtggt tggtgatcag cgcgatgtcg caggacgtgc cgccaatgtc
       61 caccgtgatg acatcggaat accccgccgt gcgcgcggtc tccacgccgc caatcacgcc
      121 tgccgctggc cccgacagaa acaaccttac cggacgttgc cgtgccacag atgatgacat
      181 cagaccgccg cgcgattgca tcatctgcag cggcaccgtc acgcgggctg cctccaggcc
      241 ctgttccaga ttgatcagat agtccacgac cacgggtttg atataagcat cgaaagcagt
      301 cacgcaggtt cgttcgtatt cgcggaaagc cggatcgacg tcggatgaca gcgataccat
      361 caggtccggg tgcagcgcgt ggatgacgtc gcgaatgcgc cgctcatggg ctggattgag
      421 aaatgcgaac accagacaaa cggcgatggc acgcacgtcc agcgcgatca gttcctcgat
      481 cgcccgcacg acactggcct catccaacgc aatcagcgtg tttcccttgg cgtccagccg
      541 ttcagtgatt tccttacgga accggcccgg tgcgaggaac accggagtct ccggctgcag
      601 cacaagatcg tacatttgat gccgcatctg ccggccgatt tccagcacat ctctgaaacc
      661 ttcagtcatg atcaggccga tgcgggcccc tttgcgctcc agcacggcgt tggtcgcaac
      721 ggtggtgccg tgcacgaaac gcgtgatgtc tgcggcggca acaccccaat cctgctgtgc
      781 catttgcagc gctgccagca cggcgcgaga gggatcgcca ctggtggtcg ggatcttggc
      841 aaaccgcacc gtgccgtcag ccaaccggca tacgacatcg gtgaaggtgc cgccgatatc
      901 gacgccgatc tcgcctcgca tcaaacatat gcctcctggg cctggccaag ggtgacacgg
      961 tgttcgccct cgtcaagcgc cggttgccag gtcaggatgg aagcgaagca cgaaaggatc
     1021 tcggccatgg ccaatctacc actgatactg accgctgccg attatgcgcg gttgatgccg
     1081 ctggcgaccg gcatggtgca gccggacggc attgatctga ccctgcttct gggacagtcc
     1141 ggttcctgga ccgagcgtgc cacgatgcta cggcgagctt tgaacgatcc cgtggtgcat
     1201 ggcggcgagg cctcgatggc aggccatctg cgtcgtgtcg aagcgggcga ccgtagccat
     1261 gtcgcactgc ctgttttccc gctgcgcaac ttcacagcac gcgatctata tgtccgcaag
     1321 gacggcaaag tacgaaccgc cgccgacctg atcggcaagc gcgtcggaat gtacgactgg
     1381 gtcgccagcg gctcgatctg gtatcgtcac ttactgcatt tcatcggtat cgatcccgcg
     1441 tcattgcagt ggtggattgg cgaagtcgac gaaccgcgta tcaccaatca tgtctacaca
     1501 ttacccgacg gcgtgcacgc caccgggcca ggccagtcgt tgtcggagat gctgattgcc
     1561 ggcgaactcg acgctgtgtt cagtcctccc aagccgcgca aatatcacgc gacgaatggt
     1621 ccgatcgcca ggctgttccc ggattttcga gcgatcgagc gcgactattt cggacaaacc
     1681 ggtattttcc cgccgcaaca cctgatcgta gtgcgccggc cggtgtggga atccaacaaa
     1741 tggatcgccc gcgctttgac cgacgctttc attcgcggca acgacatgtt cgatgccgcg
     1801 caacgcggct ttccttacgt gtccccctgg ctcgaagccg agctggagga aaccgaagcg
     1861 gtcatgggca ccgattttca tccgtacgga tttgagaaga gccgccgcac gattgaggtg
     1921 ttcgcgaacc aggcattcga cctgggcatt gtcggccggc gtatctcggc ggaggaatat
     1981 ttcgccgatt tccttgcatc ctgagccgcg ctgcaattga cacaagcctg gcgcgccagc
     2041 gacgatatat gcagaccagc aaggaccacg ttatgacgat cgatcgccgc agcctgttga
     2101 ccgccgccgg cgcggcgctt gtgccgggtt ttccacgtgg cgcttcggcc gccgccggca
     2161 agaatttcgt caccgcgaac aacagcgcgt acgacacgct cgatccgcat gtcgtgttcg
     2221 acatcggtcg cattgcgaca cggctgaaca tgtacgactg cctggtacgc tgggtcgaca
     2281 atccgcccaa actgcaactt tggctggcgg aaaaaatcga cattgcgccg gatgcggtca
     2341 cttacaccgt cacgctgaaa cccggtgcaa tattccacga cggtgcgccg gttaccgccg
     2401 atgacgtggt gttctcgatg gagcgcatcc tggccatgaa gcagggcgcg tacgggttgt
     2461 tcaaaggcgt ggtcgacgct ggcaagacca gggcactgga tgcccgtacc gtgcagttca
     2521 ccttgaacca gccgtacgcg gtcttcacct ccatattggc cgaactgtgg gtggtgaaca
     2581 gcaagctgct gcgagcgagc gaaaaatccg gcgaccgggg cgcggcatgg ctggcgcgga
     2641 acgaggcagg atccggcggc ttcaaattgc atcgctacga tcctgcaatc ggctttcagg
     2701 cagatcggtt cgacggacat ttcgctggct ttggccaatc caatatctcg caaatggaat
     2761 tccgcgtggt gctggaaact gccagccgtt cgctgggttt gcaaaagggc gagttcaaca
     2821 ccacggacgg ctatctgccg caggatcaga tcaggcattt gcgccaaacc gacagcgtac
     2881 agattctgga agcgccgtcg ttgcgtacca tgtatttcat catccacaat cagcgtccgc
     2941 ccttggacga cgtgaacctg cgccgggcgc tgtgttatgc gttcgactat gacggattta
     3001 tcaacaatat cctgtcgggc tcggtatccc ggaacgccgg aatcattccc gccaacctgt
     3061 ggggtgcgcc gaaggacctg caaggctatg cctacgacct ggacaaggcg aagcagcatc
     3121 tggcgatggt caaagggccg ctgcgcccgc tggagatcgg cgtcctcgcc ggtttcgacc
     3181 aaagtgaggc cgctgctcag ttgctgcagg ccggctgtgc gaaactcggc attgaagtga
     3241 aactgaacag cgagccgtgg ccggtcattt cgggaaaatt cgccgataag gagaagatgc
     3301 acgatctggt gccgttgtgg cgcagtgcct attttgcgga tccgcacaac tggaccggtt
     3361 acatgtacaa tagccgcaac atcggtgccg gcaatgccag tttctataag aatccgcggt
     3421 tcgacgaact gaccgacaag gccctggtgc tcaccagcca ggcagaacgg cagccgcttt
     3481 acgaggaagc ttcgcggatt ctggtggacg acgcggccgg cttgttcatc tacaatacga
     3541 aatggtttgg cccgttcacc aaaaatgttc agaacgtgcg gttttgcccg atcggcgacg
     3601 cgcaggacat ccgttggatg agtatgacct gatcaaattg cgaaatggca cgcgacctgc
     3661 aatccgcctg ccagcgtgcg caacaaaggt tcttcatcgg tgcatcgcgc cttggcctgt
     3721 ttgcagcggg tgcgaaacgc acaacccgag ggcttgttgg ccgggttcgg cggttcgccc
     3781 tccagcgcga aatcgacgct gaccctgggc cctcccgcca ctggcaccga agccagcaac
     3841 gactgcgtat aaggatgccg tggtgcggtg aagatctggt cggttgctcc gagctcgacc
     3901 acccggccca gatacatgac ggcaatccgt tgcgccatta gccggaccac agcgaggtca
     3961 tgactgatga acagataggt cagcccgaac cgctcgcgta agtcgaacaa cagccgcagc
     4021 acgatggcct gcacggacac atccagtccc gaggtcggct catcgagcac aacgaggccc
     4081 ggctgcacca tcagaatgcg ggccagccca acgcgccgtt gctggccgcc gctgatctcg
     4141 tgcggataaa gcgacaaatg acgctcaggc agcccgaccg ccgccagaat atcccgcacg
     4201 cgcgcccagc gttccgctgc cgacagattg gcatgaatca ccagcggctc agccaaagat
     4261 cggccgatgc gccagtgtgg atccagcgac gcgccggggt cctgatagca atactgcaaa
     4321 cgcctgcgta aaacccgccc ctgacgcggc gacaaccggc tgatgtcatg cccttcgaac
     4381 aggatggtgc cgccggacgg ccggtggatg cccgcaatgg tcttgccgag cgttgtctta
     4441 ccgcatccgg attcaccgac gacgccaagt atttccccac gtgcgaccga tagcgatacg
     4501 ccgtcgaccg ctcgcagcca tccggtccgc ttcccccatg cgttgcggag tggaaagtgc
     4561 gtgtgcaggt caagtaattc caatgtcggc ggcatcaggc cagcaatccg tgatgacagc
     4621 gcacccagtg atctggacgc ggttgcgccg ccagtggacg agccgcccca caaacctgcg
     4681 tcgctcctgg gcagcgcgga tggaaccggc acccggcggg tgcagcaacg aggttcggga
     4741 catcgccggc aatacctcgc aatggcgctt cgcctgtggg caggctgtcc agcaacagct
     4801 gcgtatacgg cacccccgga gcgtgaaaga acgcgtcgat cggtgcagtt tccagcacct
     4861 ggccggcata cattaccgtc acccggtcgc agatttccca ggccgtgccg agatcatgcg
     4921 ttgtcagcaa caccgacacg ccacgctcga ctgccaactt acgtagcaac atcaaaattt
     4981 gtgcctgtat cgtaacatcg agcgcggtgg tcggctcatc ggcaatgacc aaccgcggtt
     5041 ccggcaacag agccatggcg atcatcaccc gctgccgctg accaccggag agctcgtgcg
     5101 gatatttctt cagtaaccgc tccgggtccg gcagttgtac aagccgcaac aaagtcaatg
     5161 cccggtcacg gtcgatccgc cggcgggtgc gattgtagcc ggactcgagc ggctcccgat
     5221 ccggcgactt ccagcgcaac aactcggaaa tctgatcgcc gacagtgaac agcggattga
     5281 aggcactgaa aggatcctgt ggtacgaacg tgatggcgcg gccgcggatg tcttcctctg
     5341 cctcacccgg atcgatcttc agcaggtcgt ggtcctcgaa cgcgattgcc gtgccacgaa
     5401 cccgcgcatt tcgtggcaat gcaccgagaa tggtccgtgc cagcgtggtt ttgccgcagc
     5461 cggactcacc aaccaatccc atgatctcgc cacgtcgcaa cgtaagactg acctcgtcca
     5521 gcacggacgc tgtgccgttc tcggtcaagt acgagactga aacgtcgcgg atggacagca
     5581 gatcagggcc catcgttgcc tcgggacaac ctgggatcga gcgcatcgcg gaggccgtcg
     5641 ccaaccaggt tgaaccccat aaccaccagc aggattgcaa ggccgggcgc cgcggcatac
     5701 caccaggcct gcggcaggaa ttcccgactt tcagccacca tgcgacccca ttccggggtc
     5761 ggtggcggcg gaccgagccc aagaaagcca agtgcagcag ccaccagaat ggtgacgccg
     5821 aggccaatcg tagtgcgtac gatcaccgat gacgcgatcg acggcagcac gtgcagcacc
     5881 ataacccgta acggtgaggc accgagcgcg accgctgcct caatgaacac ctcgtttcgt
     5941 acactccggg tttccgcata gacgagacgt gcccaaaacg gccagtaagt gatcgaaagc
     6001 gccagaatga cgttatggat cgccggccca agggtttgcg caatggcgat cgccagcaca
     6061 atctgcggca cggcgaggaa aacgtccgac acccgcatca acaaatcgct gaaccgatta
     6121 ttgtaatagc ctgcaacaag cccaaccggc acgccgatca aaacggcggc cgaggtcgca
     6181 acgacggcaa tcagaatcgt cagccgcgca ccgaacaata atcggctgaa aatatccgcg
     6241 cccatccgat ccgtgccaaa aaaattgacc gcacttggtc ccagcagcct cctgggcaaa
     6301 tgataggcgg tgacatcctg gggatagggt gccagcaggc cggcgaacac cgcacacaga
     6361 accagcagaa ttatgatcgc cagcccaaac tgagcggacc ggtcccgcag aaaatgtttc
     6421 atcgctcgcg cggatccagc agcgtttgcg caacgtcgac cgtaagattg atcaggatga
     6481 atatgacgcc gg
//
LOCUS       DATAVD010000724         4750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_627399, whole genome shotgun sequence.
ACCESSION   DATAVD010000724 DATAVD010000000
VERSION     DATAVD010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4750
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_627399"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            33..597
                     /locus_tag="VHX39_13645"
                     /pseudo
     CDS             33..597
                     /locus_tag="VHX39_13645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631098.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            582..845
                     /locus_tag="VHX39_13650"
     CDS             582..845
                     /locus_tag="VHX39_13650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992211.1"
                     /translation="MAKRMNDGVELIKTLTGKGRGGSRPKPPKAVVRSASLEAPLPLA
                     DHEKAKRCLTAKTVAFSALFTLWLSLTAAVGLTSRPASSRHFT"
     gene            complement(758..1135)
                     /locus_tag="VHX39_13655"
                     /pseudo
     CDS             complement(758..1135)
                     /locus_tag="VHX39_13655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612206.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
     gene            complement(1621..1992)
                     /locus_tag="VHX39_13660"
     CDS             complement(1621..1992)
                     /locus_tag="VHX39_13660"
                     /inference="COORDINATES: protein motif:HMM:NF018717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEX3992212.1"
                     /translation="MPRGYFFVEIDIADPFVEIEITDPAAYGINRARLPDVISAHGGR
                     MLVRGGDPRLFDGVMSQRRFIIVEFDSLEAAREFYDSDVYRAVLPFRLNASHGFTCLL
                     IGSEPDTRISGGGRAVGKTEE"
     gene            complement(1997..2401)
                     /locus_tag="VHX39_13665"
     CDS             complement(1997..2401)
                     /locus_tag="VHX39_13665"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX3992213.1"
                     /translation="MPAPYTGGCQCGSVRYAVTAEPIRLLACHCKECQRQSASAFGMS
                     MPVKKDSLTVTGPTKQFTRTADSGNEVTGVFCPECGVRIYHVLKSAPDVVSIKPGTLD
                     DTRWLRPDLFIWMKSTQGWVPVPDGVKTLERQ"
     gene            complement(2486..3970)
                     /locus_tag="VHX39_13670"
     CDS             complement(2486..3970)
                     /locus_tag="VHX39_13670"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992214.1"
                     /translation="MTIDVPPARLPVGRVKATGYRSRIGLGVMLAGVFVTVMDNSIVN
                     VAIPSIRTTLGATFAEAELVVAGYTFIFAIGLITGGRLGDIFGQQRVFLAGFSAFTLT
                     SALCGLASGPYTLIVARLLQGASASLLSPQAISLVRISFAEGRERTAAFAVMGVVLGL
                     ANVCGQIFGGLLLQADLLGLAWRPVFLVNVPIGVISLGLAPFVLPKTGTLTGRRLDAP
                     GVLLSTAGLGMLMYPLIEGRGAGWPLWSVVMLIASPAVLAGFFLHQRWKTRRDLQPLL
                     DTNLLSDRAFAFGALVILVFFATMTPLSFSFTLMEQMGFGRSPMISALDLAWLGGPAA
                     LSPLFAGRLLRALGIRRVLIAGAMFDLAGLLAGLATCALKDEFLPGDLTPSLLLQGIG
                     YGLFMTPILNAVLSGIQDHFVGAAAGVLTTMQRGGNAVGMAVLEIPFAVSLDHAHAAG
                     RSNSTAYVHAFMVVSACIVVMILVVITLLFRLPLAPPATPATGR"
     gene            complement(3994..4275)
                     /locus_tag="VHX39_13675"
     CDS             complement(3994..4275)
                     /locus_tag="VHX39_13675"
                     /inference="COORDINATES: protein motif:HMM:NF016162.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF427 domain-containing protein"
                     /protein_id="HEX3992215.1"
                     /translation="MRAILNGQVIAESEEIEIGAGYRYFPASAMRLDLLEKTPETETD
                     LACPHGVQFYDVVIDGVRHERAAWSYEAPRPSLQHVGGWFGFWNEVEVA"
     gene            4434..>4750
                     /locus_tag="VHX39_13680"
     CDS             4434..>4750
                     /locus_tag="VHX39_13680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3992216.1"
                     /translation="MVTALTLDKSILSILYIDGSDGDRVNLASTDLNLLVAFDALMAE
                     RSVTRAGQRIGLGQPGMSAALARLRATFGDELFVRIPGKPMRPTTRAIGLHAPIAEIL
                     AGA"
BASE COUNT         1018 a         1448 c         1418 g          866 t
ORIGIN      
        1 gcgagtcgag cccgcattcg caaggacggg tcatggaaca gcctcccact tcgccgtgct
       61 ttgtcggcat cgatgtttcg aaggatcgtc tcgatgtcca tgttcgccca tcaggcctga
      121 tcttcgcggt ggcgcgcgac ggcaaaggtc ttgagcaact cacaactcaa atacgcgacc
      181 tggctccggc tctgatcgtg ctcgcagcaa caggcggatt cgagatcacg gtggcggcgg
      241 ctttggccag cgccggtctg ccgctcgccg tggtcaatcc gcgtcagatc cgggatttcg
      301 cccgtgcaac tcgatcggcg tcgtatcgcc gccctggttg gtgtcgcgcc ggtcaatcgt
      361 gattctggac agatgcgcgg cagacgagtt atcgccggcg gccgaaccga tgttcgaaac
      421 gctctatata tggcaactct gtccgcgacc aggtggaacc cggtcatcag tcaacattac
      481 aaaagtctgg ttgaacgggg acgcccaaag aaagtcgcgt tggtcgcatg tatgcggcgc
      541 ctcctcggca tcctcaatgc aattattcgg acgggaaccc catggcaaaa cgcatgaacg
      601 atggcgtcga gctgatcaaa accctgactg gcaagggtcg cggcgggtca aggccgaagc
      661 cgccgaaggc ggtggtgcgc agcgccagcc ttgaggcgcc gctgcccttg gcagatcatg
      721 aaaaagcgaa acgatgcttg acagcaaaga cagtcgcttt ttcggcgctt ttcacgcttt
      781 ggctgtcgct caccgccgct gtcggactga cctcccggcc agccagttcg cggcatttca
      841 cgtaaagcgc gtgatggatc cgctccagcg tccggtcgtc gttccaacgg tcgaaatagt
      901 catgaattgt gctcattggc ggaaagtccc tcgggatcgc gtcccattgg cagccagtgc
      961 tgagcagata catgaggccg ttgagcaccc tcctcacatc gaccgttcgc ctattgccgc
     1021 caggtctggc cggcggaatt tccggagcga cctcagccca ctcctcgtct gtcaggtcgg
     1081 aggggtagcg cagatggcct cggtcatagc ggcaacggtt ctcctgggtc cacattctac
     1141 acctcgcgaa tcgatggtgg tcatcgaatc gaaagaaccc aggtgtcgca agggctgtcg
     1201 accaggagac gctaaagact tatgaagttc ccggatggac actgaatgac gtccctgata
     1261 cttggagagg acgtagtcca ggattttgtc gccgtcccgc ggatgctcgt tcaccgtcac
     1321 gggtcgcttg gagaggaggt cgaggccggg gtcgctcaac actttgttgt gctcgcccat
     1381 cccctaagta cgagccgcaa atcgaacaga agtggcgcaa cccgccagtt gacgaattat
     1441 aggacgtgac gtgccgctca cccgttgtcc agcgaaaatt gccaggaagg attccaatcg
     1501 ttgagatgaa cgcggcagtg ttcacctggt ggcagataac acactggcag agcccgccag
     1561 gcagatcagg ccgatccgcg tcgaaccgca cctctccgca cagacatcct cctgtcagct
     1621 tcattcttcg gtctttccca cggctctgcc gccaccggaa atgcgcgtgt ccggttccga
     1681 tccgatcagc aggcacgtga acccatggct ggcgtttaac cggaacggca gcaccgcacg
     1741 gtacacatcg gagtcataga attcccgagc ggcctcgaga ctatcgaact cgacaataat
     1801 gaagcggcgt tgcgacatga cgccatcgaa caatcggggg tctccgccgc gcaccagcat
     1861 tcgcccgcca tgagccgaga tgacgtcagg gagcctcgcg cggttaattc cataggcggc
     1921 cggatcagtg atttcaattt caacaaacgg atcagcgatg tcgatctcca cgaagaaata
     1981 ccccctgggc atgatttcat tgcctctcaa gcgtcttgac gccatcgggg accggaaccc
     2041 agccctgcgt actcttcatc cagatgaaga ggtctggccg gagccagcgc gtgtcatcaa
     2101 gagtgccggg tttgatggaa accacgtccg gtgcggactt cagaacgtga tagatgcgga
     2161 cgccgcactc ggggcagaac acgcccgtga cctcgttgcc actgtcggcg gtacgcgtaa
     2221 attgcttcgt cggcccggtc actgtcagac tgtccttctt taccggcatg gacatcccga
     2281 aggcgctggc ggattggcgc tggcattctt tgcagtggca ggcgagtaag cgaattggct
     2341 ccgccgtcac tgcgtaacga actgagccgc attggcatcc gcctgtgtag ggtgcgggca
     2401 tgttgttcac tcctgtaccg gccgatcgtt gatcgcgaga gataacggtg gatgtcttcg
     2461 ttcccgccga tgttggggca tcgttctatc gtcccgtggc cggagtagcg ggcggtgcca
     2521 acggaagacg aaaaagaaga gtgatgacga ccagtatcat cacaacgatg caggcggaga
     2581 ccaccatgaa tgcgtgaaca tatgcagtgg agttggaacg acccgcggcg tgggcatggt
     2641 cgagggagac cgcgaacgga atctccaaca cggccattcc gacagcattg ccacctcttt
     2701 gcatcgtggt cagaacgccg gccgccgcgc ctacgaaatg gtcctggatt ccgctgagca
     2761 ccgcgttgag gatcggggtc atgaacaacc cgtaaccgat gccctgcaac aacagcgatg
     2821 gggtcaaatc gcccggcaag aactcatctt tcaacgcaca ggtcgccagg ccggcaagca
     2881 atccggccaa atcaaacatt gcccccgcga tcagaacacg ccttatcccg agcgcccgga
     2941 ggaggcgtcc cgcgaacagc ggcgacaaag ccgctgggcc tccgagccac gcgaggtcca
     3001 gggccgatat catcggcgac cggccgaacc ccatctgttc catcagcgtg aacgaaaacg
     3061 aaagcggtgt catggttgcg aaaaaaacga gaattaccaa cgcgccaaag gcaaacgcgc
     3121 ggtcggaaag caggtttgta tcaagcaatg gctgcagatc acgccgcgtc ttccaacgct
     3181 gatgcaggaa gaaccctgcc agcacggcgg gcgatgcgat cagcatgacc acggaccaga
     3241 gcggccagcc ggcaccgcgc ccctcgatca gcggatacat tagcatgcca aggcccgcag
     3301 tgctcagcag aacacccgga gcgtccagtc tgcggccggt taaagtaccc gtcttgggca
     3361 gcacgaaagg cgccaagcca agactgatga cgccgatcgg gacgttcaca agaaacacag
     3421 ggcgccacgc gaggcccagg agatcggctt gcagcagcag accgccgaag atctggccac
     3481 acacattcgc caaccccagg acgacgccca tcaccgcgaa ggccgccgtc ctttcccgcc
     3541 cctcggcaaa gctgatccgt accagggaga tcgcctgcgg tgaaagcaga gacgccgacg
     3601 caccctgcaa aagccgcgca acgattagcg tatacggacc ggacgcgagg ccgcacaggg
     3661 cagaggtcaa cgtgaaggca gaaaaaccgg ccaggaagac ccgttgctgg ccgaagatgt
     3721 cgccgagccg gccgccggtt atcagcccga tggcgaagat gaaagtgtag ccggcgacga
     3781 cgagttccgc ttcggcgaag gtcgcgccca acgttgtcct gatactggga atggcgacat
     3841 tgacgataga attgtccatt accgtaacga agaccccggc gagcatcacg ccaaggccga
     3901 tccggctgcg gtatccggtg gctttgaccc gtccgacggg caaccgggcc ggtggtacat
     3961 cgatggtcat ggcggggacc gcgagattgc ggctcaggcg acctcgacct cattccagaa
     4021 tccgaaccat ccaccgacgt gctgtagaga tggacgcgga gcttcatacg accacgccgc
     4081 gcgttcatgc cgaacgccgt cgatgaccac atcgtagaac tggacgccat gcggacatgc
     4141 gaggtccgtt tcagtctccg gcgtcttctc gagtaggtcc agccgcattg ccgaagctgg
     4201 gaaataccgg tagccggcgc cgatctcaat ttcttcgctc tcggcgatga cctggccgtt
     4261 cagaattgca cgcatggttg ggtccttatt ttgaactgga cacgcctgac cttcggggaa
     4321 tcccggcccg gtcacgctgg aaatctgaaa acatccgcgg aaacgccggt gcacccatcg
     4381 actcccgtgc ttccgcctcc gttgttccga cgagatgccg ggaccacgag aacatggtaa
     4441 ccgcgctgac cctggacaaa tcgattttaa gtatcttgta tatcgatggc agtgatggtg
     4501 atcgcgtgaa tctcgcctcg acggatttga acttgctcgt ggccttcgat gcgctgatgg
     4561 ctgagcgcag cgtgacgcgt gccggtcagc gcatcggtct gggccagccc ggcatgagcg
     4621 cggcgctcgc ccgcctgcgc gcgacgttcg gcgacgagtt gtttgtcagg atcccgggaa
     4681 agcccatgcg gccgacgact cgcgcgatcg gactgcatgc gccgattgcc gaaattctgg
     4741 ccggcgcaag
//
LOCUS       DATAVD010000725         4081 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1558490, whole genome shotgun sequence.
ACCESSION   DATAVD010000725 DATAVD010000000
VERSION     DATAVD010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4081
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1558490"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..690
                     /locus_tag="VHX39_13685"
     CDS             <1..690
                     /locus_tag="VHX39_13685"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3992217.1"
                     /translation="RTGGQISELYREWAGEIHDSGRNLLDLINDVLDLSRIDTDQYEI
                     SDDNVDLEVVARACRGLVRQQAEANQVRVECEITGTIVFADRRAVKQITLNLLTNAVK
                     FTPAGGTVTIRAECAANRDLALVVADTGIGIDPAALALLGNPFTQADSSPRRKYGGTG
                     LGLAISRKLAAMHGGSLTIESVLGQGTTVRVNFPAERVLRSQWSQCSFARPETRAITA
                     DYGTRSERTGP"
     gene            687..3074
                     /locus_tag="VHX39_13690"
     CDS             687..3074
                     /locus_tag="VHX39_13690"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX3992218.1"
                     /translation="MIDDLPGHCPHAFAQLNAAYLPALRNLCYLATVPVAIGTMTLAA
                     QWGFVVPNTPGVLLLAVAYCAYRAGLITGLISAAIQVMFSAIFFSKTGHLFHYDTNNL
                     LRTVVISLVSPAMAVMIGMLRQEADELVDRLKTNETNLHLVNAELEQLVTARTTEAIE
                     ARQQSETLRDVFLERFRALIESIKDYAIVMLDPDGRVITWNPGAQQLIGYTEKEIIGQ
                     KVERFFPPEDIAVGMPGRLLAQAAEIGRCEVEGWRIRKDGTQFFAHVVLTAMRDPAGE
                     LVGFAKITRDITERKQVENALRASEAQLRRAQRLVQMGTDVINLRTGEWQWSDETYAI
                     FGVSRETFVPTVRNVMALVHPDDRLHVRERRARRVAEDRCPEPIEYRIIRPDGGLRWL
                     YRESELVDGKDEILTTTLDITDRRRTEEQLHRAQKMEAIGNLTGGVAHDFNNLLGVIV
                     GNIDAVYDLRKDDPEVAELTQDALAAAFRGAELTRLLLAFARQQKLQPQRIDVNEMVS
                     GVTRLLRRVLAQNIEIRLDLARELWPAMADPAQLETSLINLANNSRDAMPDGGELKIV
                     TGNRHLDAADHDEVTPGDYVMIEVSDTGTGMSAQIAAQIFEPFFTTKERDKGTGLGLS
                     MVFGFIKQSGGHISVSSEPGVGTTFRLWLPRMEKDNAMHDDDLALPAERGGETILVVE
                     DNAPLRRIVVRQLSELGYHVLTAENGITALEVMQRESIDLLLTDVIMPGGIDGVELAR
                     RARQHGPELKVVFTSGFVEPIADCPRKTLPADAQLLAKPYRRDQLAALVRESLDA"
     gene            complement(3075..>4081)
                     /locus_tag="VHX39_13695"
     CDS             complement(3075..>4081)
                     /locus_tag="VHX39_13695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HEX3992219.1"
                     /translation="AFARERQRYARLRRLAAETTDGETVELQANFELPVELPLIAQSG
                     AVGIGLLRTEFLFMNRDTMPDEYAQAETYRGIVEAMNGDTVTIRVLDWGGEKDIEALS
                     NAGLVPDISDVNPAMGLRGLRLLLRRPELFETQLTAIIRASVYGPVRVLLPMVTTVTE
                     VRAAREIYERVARRLRRRGERVPEKLPPLGIMIETPGAALSADALALEADFFAIGTND
                     LTAHTLAVDRGETDVAAMYNPLHPAVLRLIQFATEAALRMRMPVSLCGEMAGDPRITP
                     LLLGLGLRAFSMNASAVPRVKLVVRTVDSGACVRFARRVMEQTDPEQIGALLARFAAG
                     "
BASE COUNT          846 a         1275 c         1218 g          742 t
ORIGIN      
        1 cggaccggtg ggcagatcag cgagctctac cgggagtggg ctggcgaaat tcacgacagc
       61 ggccggaatt tgcttgacct gatcaacgac gttctcgatt tgtcgcgtat tgacacggat
      121 cagtatgaga tttccgatga caatgtcgat cttgaagttg ttgcccgagc ctgtcgcgga
      181 ttggtgagac agcaggcgga ggccaaccag gtacgggtcg aatgcgaaat caccggcaca
      241 atcgtttttg ccgatcgccg ggcggttaaa cagatcaccc tgaatctgct gaccaacgcg
      301 gtgaagttca ccccagccgg cggtactgta acgatccgcg ccgagtgtgc cgctaatcgc
      361 gatctggccc ttgtcgttgc cgataccggc attgggatcg atccggcggc gctggctttg
      421 cttggcaacc ccttcaccca ggcagattcg tcgccccgcc gcaaatacgg tggcaccgga
      481 ctgggcctgg cgatcagccg caaacttgcg gcgatgcatg gtggctcgct gacgattgaa
      541 agcgttttgg gtcagggcac caccgttcgg gtcaacttcc cggcggagcg ggttttgcgc
      601 agccagtgga gccaatgttc ttttgcgagg ccggaaacgc gcgccatcac ggcggactac
      661 ggcacgcggt ccgaacgcac cgggccatga tcgacgacct gccgggtcac tgcccccacg
      721 cttttgccca acttaacgcc gcttacctgc cggcgctgcg caatctttgc tatctcgcga
      781 cggtaccagt ggcgatcggc acaatgacat tggcagcgca atggggcttc gtcgtcccga
      841 acacgccggg agtgctgctg ctggcggtcg catattgcgc gtaccgtgcc ggcctcatca
      901 ccggcctgat cagcgccgca atccaggtca tgttttccgc gatcttcttt tccaagaccg
      961 gtcatttgtt ccattacgac acgaacaatc ttctgcgcac agtcgtcatc tcacttgtct
     1021 cgccggcaat ggcggtgatg atcggcatgc tacggcagga ggccgacgaa ttggtcgacc
     1081 gactgaaaac caacgaaacg aatttgcacc ttgtcaacgc ggaactcgaa caattggtca
     1141 ccgcacggac caccgaagca atcgaggcac gccagcaatc cgaaacgtta cgtgatgtct
     1201 ttctggaacg cttccgggcg ctgatcgaga gcataaagga ctatgcgatt gtcatgctcg
     1261 atccggacgg ccgcgtcatc acctggaacc caggtgccca acagctgatt ggttataccg
     1321 agaaagaaat aatcggacag aaggtggaac ggtttttccc gccggaggat attgccgtcg
     1381 gaatgccggg acgcctgctc gcacaggcag cagagatcgg ccgctgcgaa gtggagggtt
     1441 ggcggattcg caaggacggt acgcagtttt tcgcccatgt cgtactgacg gcgatgcggg
     1501 acccggcagg cgaactggtc ggctttgcca agatcacgcg cgacattacc gaacgcaagc
     1561 aggtcgagaa cgcgctgcgt gccagcgagg cgcagctgcg gcgggcgcag cgccttgttc
     1621 aaatgggcac cgatgtcatc aacctgcgga ccggcgaatg gcaatggtcg gacgaaacct
     1681 acgcaatttt cggcgtgtct cgcgaaacgt ttgtgccgac ggtcaggaat gtcatggctc
     1741 tcgtgcaccc ggatgatcgg ctgcacgtac gggaacgccg tgccaggcgc gtcgccgaag
     1801 accgctgccc ggagccgatc gaatatcgca tcattcggcc ggacggcggc ctgcgctggc
     1861 tttatcgtga gtcggaactc gtagacggca aggacgagat tttgacgacc acgctcgaca
     1921 ttaccgatcg ccgccgcacc gaggaacaat tgcaccgagc ccagaaaatg gaagcgatcg
     1981 gcaacctgac cggcggtgtg gcgcacgatt tcaacaatct gcttggcgtt atcgtcggta
     2041 atatcgacgc cgtgtacgac ctgaggaaag acgaccccga ggtcgcggaa ctgacacagg
     2101 acgccctcgc cgcagcgttt cgcggtgccg aactgacccg cctgctgctg gccttcgcgc
     2161 gtcaacagaa gctgcagccg cagcgcatcg acgtcaacga gatggtatcc ggcgtaacca
     2221 ggctgttgcg ccgtgtgctg gcccaaaaca tcgaaatccg gctcgacctt gcccgcgagc
     2281 tatggccggc catggccgat ccggcgcaac tcgaaaccag cctcatcaat ttggccaaca
     2341 acagccgcga cgccatgccg gatggcggcg agctgaagat cgttaccgga aaccgccacc
     2401 tcgatgccgc ggatcacgac gaggtgacgc ccggcgacta tgtcatgatt gaagtcagcg
     2461 acaccggcac cggcatgtcg gcacaaatcg ccgcgcagat cttcgagccg ttctttacga
     2521 ccaaagaacg ggacaagggt actggtctcg gcctgagtat ggtcttcggt ttcatcaagc
     2581 agtcgggcgg ccacatcagc gtcagcagcg aacctggagt cggcacgacg ttccgcctgt
     2641 ggttgccacg tatggaaaag gataacgcga tgcacgacga cgatttggcg ctgccggcgg
     2701 aacgcggagg ggagacgatc ctggtcgtcg aggataatgc cccgctccgc cgcatcgtcg
     2761 tacgccaact cagcgaactt gggtatcatg tattgacggc cgagaatggc ataaccgcgc
     2821 tggaggtcat gcaacgggaa agcatcgatt tgttactgac cgatgtcatc atgcctggcg
     2881 gtatcgacgg cgtcgaactg gctcggcggg cccgtcagca tggaccggaa ctcaaagttg
     2941 tctttacgtc cggcttcgtg gagcccattg ccgattgccc ccgcaaaacc ctgccggcgg
     3001 atgcacagct gttggccaag ccctatcggc gggaccaact ggccgcgttg gtacgcgagt
     3061 cactggatgc atgactaccc ggcagcaaac ctcgcaagca gcgcaccgat ttgctccgga
     3121 tccgtctgct ccatcacccg ccgcgcaaac cgtacgcagg cacccgagtc caccgtccga
     3181 accaccaact tcacccgcgg caccgccgaa gcattcatac tgaaggcgcg caaccccaga
     3241 cccaaaagca gcggcgtaat gcgcgggtcc cctgccatct cgccgcacaa cgagacaggc
     3301 atgcgcatcc gcaacgccgc ctcggtggcg aactggatca gccgcagtac cgccgggtgc
     3361 aacggattgt acatcgctgc cacgtcggtt tcgccgcgat cgacggccag cgtgtgggcc
     3421 gtcagatcat ttgtgccgat ggcaaagaaa tccgcctcca atgccaatgc atcagccgac
     3481 aacgccgcac ccggcgtttc gatcatgatc ccaagcggcg gcaatttctc gggcacccgc
     3541 tcgccgcggc ggcgcaaccg gcgcgccact cgttcataaa tctcgcgtgc tgcacgcacc
     3601 tcggtgaccg tcgtgaccat cggcagcagc acacgcaccg ggccgtaaac cgaagcgcgg
     3661 atgatggcgg taagctgggt ctcgaacaat tccggccggc gcagcaaaag ccgcagacca
     3721 cgcaacccca tcgccggatt gacgtcagat atgtccggca ccaggccggc gttcgacagt
     3781 gcttcgatgt ccttctcgcc gccccagtcc agcacacgga tggtgacggt atcgccattc
     3841 atcgcctcga cgatgccgcg ataggtctcc gcctgagcgt actcgtccgg catcgtgtcg
     3901 cggttcatga acaagaactc ggtgcgtaac aatccgatgc ccacggcacc ggattgcgca
     3961 atcagcggca gctcgaccgg cagttcgaaa ttggcctgca attcgaccgt ttcgccgtcg
     4021 gttgtttcgg cagccaaacg gcgcagcctg gcataacgtt gccgttcccg tgcaaaggcg
     4081 g
//
LOCUS       DATAVD010000726         3782 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_998321, whole genome shotgun sequence.
ACCESSION   DATAVD010000726 DATAVD010000000
VERSION     DATAVD010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3782
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_998321"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1372
                     /locus_tag="VHX39_13700"
     CDS             <1..1372
                     /locus_tag="VHX39_13700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyl transferase family 1"
                     /protein_id="HEX3992220.1"
                     /translation="VSTPYWHARELLADGRGILVPFHDAAAIGEAIAGLLTDGTRRQA
                     MRKRAYASSRSMTWKRVADRYHAVFEHVRRGYRLNLVANLDKGARARGEPPDMQIGHL
                     LSMCDDTGLFQHAVHSIPDRSHGYCIDDNARALLLACAFNTPGEQALPDVLTARLAAF
                     VQHAWNPATRRFRNFMGFNRVWLEESGSEDSHARAVWALGECARSDVSPSRRQWATGL
                     FREALPPAARFGSPRAWAFVLLGLDAYCSVVKDDAQADRLRLALADSLISLLASVETD
                     DWVWFEEGLSYDNARLSQALILTGIATGTSAYVTAGLKSLCWLMKQQTAASGVFRPIG
                     TEGFGDIRKPPRMFDQQPLEAAATISACLAAWRVEGDAKWKTDAIRVFTWFLGHNDLS
                     LPLVDLETGSCRDGLHPDRVNENRGGESAVSYLLSLAEIRLANRLGSIRAKFLPRPSP
                     ALAKAN"
     gene            1453..2685
                     /locus_tag="VHX39_13705"
     CDS             1453..2685
                     /locus_tag="VHX39_13705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 130 protein"
                     /protein_id="HEX3992221.1"
                     /translation="MRPFKPATEPRDLNPTDKTRANHIVDRVLALDAREAADQLVEVL
                     ENFQGRHRNLLAIFEARADEMEAAFASHAGFSMIQRQLIGAYFLHEYSFEAAALFNPS
                     IISHPDQSDAPEGGRRFILSLRAVGEGHVSSLTFRAGSIAANGDVMVDPTSRLATSAV
                     IRNRITGAEGDEVELTFAPHGDISERVIFPVTESQWHGIEDARFVEFNDSGKRTFYAT
                     YTAYSGAAIRSELLETTDFVNFRLIPLSGTAARNKGMALFPRKIDGKFAMIARQDNEN
                     LYLIYSDDLYFWSGGTAILRPQFPWEFVQIGNCGSPIELDEGWLLLTHGVGPVRKYSI
                     GAALLDKNDPSKVLARSREPLVRPEPSEREGYVPNVVYTCGALRHNDQIVLPYAVSDT
                     FSNFASIKISALIKTMVG"
     gene            complement(2826..3338)
                     /locus_tag="VHX39_13710"
     CDS             complement(2826..3338)
                     /locus_tag="VHX39_13710"
                     /inference="COORDINATES: protein motif:HMM:NF042560.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6675 family protein"
                     /protein_id="HEX3992222.1"
                     /translation="MDALLTKIGAISTLKEIFYWSADDKTWGHLANDASALSDANAMD
                     RRRDFAASDFVKGTDLYYWEDGESTGATVYRLKVFESTPQRLVISSDNVTTMHKFIFT
                     LFKPGTLQSLLFIQQLSSETFDVYILTRTGEGASVLSNGHEEVFINRADALFRQLAGI
                     KTDQEPPAMR"
     gene            complement(3596..>3782)
                     /locus_tag="VHX39_13715"
     CDS             complement(3596..>3782)
                     /locus_tag="VHX39_13715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEX3992223.1"
                     /translation="SVSDNGVGRLEGAGRAAKGGLGTSLVTALAHQLDAKVVTTSGPA
                     GMSVSVTHATFVSRLSA"
BASE COUNT          751 a         1126 c         1118 g          787 t
ORIGIN      
        1 cgtctcaaca ccctattggc atgcgcgcga gttgctcgcg gacgggcgcg ggatcctggt
       61 cccgtttcat gatgccgccg ctatcggcga ggcgatagcc ggcctgctga cggacggcac
      121 ccggcgccag gccatgcgca agcgggctta tgccagcagc cggtccatga cctggaaacg
      181 cgtggcggat cgctaccatg cggttttcga gcatgtccgc cggggatacc gtctcaatct
      241 ggtcgccaat ctcgacaagg gagcgcgagc gcgcggagaa ccgccggata tgcagatcgg
      301 gcaccttctg tccatgtgtg atgatacggg gcttttccag catgcggtcc attccatacc
      361 cgacaggtca catggctatt gtatcgacga caatgctcgc gcgcttctgc tggcctgcgc
      421 cttcaacacg cccggcgaac aggccttgcc ggacgtattg acggcgcgcc tggccgcctt
      481 tgttcaacat gcctggaacc cggcgacgcg gcgatttcga aatttcatgg gcttcaaccg
      541 tgtctggctc gaggagagcg gctcggagga cagtcacgca cgcgccgtgt gggcgctggg
      601 cgaatgcgca cgcagcgacg tcagcccttc ccggcgtcaa tgggccaccg gactgttcag
      661 ggaggcattg ccgcccgccg cgcgttttgg ttcgccccgc gcctgggcgt ttgttctgtt
      721 gggcctggac gcctattgca gtgtggtcaa agacgacgcg caggcagatc ggctgcggct
      781 ggcgctggca gacagcctaa tctctcttct cgcatcggta gaaaccgacg actgggtctg
      841 gttcgaggaa ggcctttcct atgacaatgc cagactgtcg caagccctga tattgacggg
      901 aatcgcgaca ggaacatcgg cttatgtcac ggccggactg aagtccctgt gctggctcat
      961 gaagcagcaa acagcggcat caggggtctt ccgcccgatc ggcaccgagg gctttggcga
     1021 tatccgaaag ccgcctcgca tgttcgatca gcagccgctc gaagcggctg cgaccatttc
     1081 cgcctgcctg gcagcgtggc gggtggaggg ggacgcaaaa tggaagacgg atgcgatccg
     1141 cgtgtttacc tggtttctgg gccataacga tttatcgctg ccgctcgtcg atctggaaac
     1201 aggaagctgt cgcgacggac ttcatcccga ccgggtgaat gagaaccggg gcggtgagtc
     1261 cgccgtgtct tatctcctca gtctcgccga gattcgtctg gccaaccgcc tcggttcaat
     1321 ccgcgcgaaa ttcctgccgc gtccgtcacc ggcgcttgca aaagccaact aaggacagag
     1381 ggtaatttgt cacaaatcca gttcctgaac cggcaggctc tctatctgcg gcccgatcct
     1441 gccagggtta tcgtgcggcc attcaagccg gccacggagc cgcgcgatct caatcccacc
     1501 gacaagaccc gcgcaaacca catcgtcgac cgagtcctgg cgttggacgc ccgggaagcc
     1561 gccgatcagc tggtagaggt tctggagaat ttccagggac ggcatcgcaa cctgctggcg
     1621 atattcgaag cgcgcgccga cgagatggag gcggcgtttg ccagccatgc cggtttcagc
     1681 atgatacagc gccagctgat cggggcctat tttctccacg aatattcctt tgaagcggcc
     1741 gcactgttca atcccagcat catttcccat cccgaccagt ccgatgcgcc ggaggggggg
     1801 cggcggttca ttctcagctt gcgcgcggtc ggtgaaggcc atgtttcctc gctgaccttc
     1861 cgcgccggct ccattgcggc gaatggcgat gtgatggtgg atccaacgtc gcgccttgcc
     1921 acaagcgcgg ttatccgaaa tcgcataaca ggcgccgagg gtgatgaggt cgagctgact
     1981 ttcgcgccgc acggggacat cagcgaacgc gttatctttc ccgttacgga atcccaatgg
     2041 cacggcattg aggatgcacg gttcgttgaa ttcaacgaca gtggcaaaag gacgttctac
     2101 gccacctata ccgcctatag cggtgccgcg ataagatcag aactgctaga aacaaccgat
     2161 ttcgtcaatt tccgcctgat acccctcagc gggactgccg cgcgcaacaa gggcatggcg
     2221 ctgttcccgc ggaaaattga cggtaagttc gccatgatcg cgcggcagga caatgagaat
     2281 ctgtatctca tctattctga tgatctgtac ttttggagcg gcggaacggc gattctgagg
     2341 ccccagtttc cctgggagtt cgtgcagatc ggcaattgcg gatcaccgat tgaactcgat
     2401 gaaggctggc tgctgctgac tcatggcgtc ggtccggtcc gcaaatattc gatcggtgcc
     2461 gctctgctgg acaaaaacga tccgtcaaaa gttcttgcgc gctcacgtga gccgctggta
     2521 cggcccgaac cttcggaacg ggagggttat gtccccaatg tggtctatac ttgtggggcc
     2581 ttgcggcata acgaccagat cgtcctgccc tacgctgtct cggatacctt ctcaaatttc
     2641 gcctcaatca agatctctgc gctcattaaa actatggtcg gatgactgtg ataacgccat
     2701 tcgtattcca ccgttaccac caatgacgtg catacgccct tcaatttgta ccctgtttgg
     2761 gctctagatc ggggatgacc tccgatggat cagggagagc tttggtggac cagcgcttgc
     2821 aaaggtcagc gcatcgcggg cggttcctga tctgtcttta ttcccgccaa ctgtcgaaac
     2881 agggcatcgg cacgattgat gaatacctct tcgtgtccat tagacaggac gctcgcgcct
     2941 tcgcccgtcc gcgtcaggat atagacgtca aatgtttcgg aagaaagctg ctggataaac
     3001 agcagcgact gcagcgtgcc tggcttgaac agggtgaata tgaatttatg catcgtggtg
     3061 acgttgtcgc tcgaaatcac cagacgctgc ggcgtgctct caaacacctt caaccggtat
     3121 actgtcgcgc ccgtgctttc gccgtcctcc caataataga ggtccgtacc tttcacgaaa
     3181 tccgaggcag caaagtccct gcggcgatcc attgcgttgg catcgctcaa tgcggacgcg
     3241 tcgttggcca gatgccccca cgtcttgtcg tccgccgacc aatagaaaat ctccttcaac
     3301 gtggaaatgg cgccgatttt cgtcagcagg gcgtccatcc caccgtcaaa gtgaaagctg
     3361 ccggtcacag tcacgataag ttttgagcgg gacccggccg gccaccctgt gcagcttggc
     3421 ggctgccagt tgtcctgcgc aaggtcactt gcgtgccaaa ccccgattgt cggggacgtg
     3481 ccgggagaag gatatgcata ggatgctgat gcgtcacatg gcagctgagg gctcgccgcc
     3541 tgggcggcgg tcgcgagaac caacatcaca gacggaagta tgaagcggtg caatttcacg
     3601 cagaaagccg tgacacgaaa gtcgcgtgtg taacggaaac gctcatgcca gccggaccac
     3661 tggttgtcac gacctttgcg tcaagctgat gggcaagcgc ggtcaccagg cttgtgccga
     3721 gcccgccttt tgcagcccga ccggcgcctt ctagccggcc cacgccattg tcggagacgg
     3781 aa
//
LOCUS       DATAVD010000727         4455 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2861666, whole genome shotgun sequence.
ACCESSION   DATAVD010000727 DATAVD010000000
VERSION     DATAVD010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4455
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2861666"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(15..1085)
                     /gene="pstS"
                     /locus_tag="VHX39_13720"
     CDS             complement(15..1085)
                     /gene="pstS"
                     /locus_tag="VHX39_13720"
                     /inference="COORDINATES: protein motif:HMM:TIGR00975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HEX3992224.1"
                     /translation="MNHRTSKLAASLGVIGLGLVLTVLAPCAGRAADITLTETGSTLL
                     QPLLQIWVSEYGKNHPGVTITIGGTGSEAGIRQASSGAVEIGASDAYMSDAQVRATPD
                     VMNIPLAIAAQTINYNVPGVKSQLQLDGPTIAGIYTGAVRYWDAPQIVAMNQGVTLPH
                     QAIIPVHRGEGSGDTFMLTQFLSFSTPSWEDDKGYATTITWPAVPGGLAATGNDGMVK
                     TIQATPYSIGYVGVSFADAIASAELGTVALKNNDGDFVLPTKEGIIAGAAALGPRTPP
                     DERLTLAFAPGATSYPLVSYEYAIVSKHQKTPETAAALRRFLLWCIEPSEDKAAILDK
                     VHFIPLPAHTWELSQAQIQMIK"
     gene            complement(1127..2611)
                     /locus_tag="VHX39_13725"
     CDS             complement(1127..2611)
                     /locus_tag="VHX39_13725"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992225.1"
                     /translation="MSEAQRMSQSGEIGKPSVQHYIDERPMWPDGTLLPTVELTAMQK
                     RIWTLAAAGKFFEGFVVFMTGVALPLISREFEIGSAQNGLISAASLAGILVGAIGLGG
                     MSDAFGRKRMFIIEMIIFCAFLVALVFCTNFVSLIVCLFGLGVALGCDYPTAHMIISE
                     SIPSTSRGKLVLAAFAFQAIGALGGTAVGYFVLVADPGLDAWRWMYATAIIPAVIVTI
                     GRFFIPESANWLHIRGATEKAEEAAQRLLLRAPIYPGTVKLVRDTAAAAEGHGSGGFP
                     ALFRRQNLRATIFSSVPWFIQDLGTYGIGIFTPTILAATLGKTADHVRSVSDLILNDI
                     LAAKGAAMTTTLLIIGIGFAVVLADRVGRIWLQVLGFIGCAAGLLVAALADNFVGGTQ
                     TLLIFVGFMLFNFMTNIGPNAQTYLLAGEVFPTEIRGVGAGFAAAVGKIGAVSTAFLF
                     PILLVSIGTSALLYILVGTSLLGAVVTWVYRIETNGVSLAEIGR"
     gene            2985..3560
                     /locus_tag="VHX39_13730"
     CDS             2985..3560
                     /locus_tag="VHX39_13730"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3992226.1"
                     /translation="MAAHRAAILRQAGRLFRQHGIDGVAVADITGAAGLTHGAFYGHF
                     PSKTALAAESCRHSLESSARIWRERAEAARSSGADPLVALIDSYLTPRHRDSREASCM
                     LASVGPEASRDPDLRADLAIGVTALSLVLQELIAERHPDAEPQHHLEVALAVLAALSG
                     GLTLARALSADPERSAAALRSAAVLAKRAAE"
     gene            3574..>4455
                     /locus_tag="VHX39_13735"
     CDS             3574..>4455
                     /locus_tag="VHX39_13735"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992227.1"
                     /translation="MLSHLLAPALARRGIHYGWAVVAVTFLTMLATAAAMGMPGVLLL
                     PLKGEFGWDLGQISGALALRLLLYGLVAPFAAALMQRYGMRAVVASALGVIVAGLALA
                     TQMTRLWELWLTWGLMIGLATGVTANVLGATVANRWFAQRRGLVIGLLSASSATGQLL
                     FLPLAAWLSDHLGWRLAMAPAGVLCLLCLGLVILVVRDYPGELALPSFGETEIVPPPS
                     RRAGGNALTLSFAALSVAARNRGFWILFGTFFICGVSTNGLVQNHFIPLCHDFGLDAV
                     AAASVLAMMGAFDFVGTI"
BASE COUNT          801 a         1399 c         1412 g          843 t
ORIGIN      
        1 cgcgaacaac caacctattt gatcatctgg atctgcgcct gactcagctc ccacgtatgc
       61 gccggcagag gaatgaagtg cactttgtcc agaatggctg ccttgtcctc tgacggctcg
      121 atgcaccaca gcaggaagcg ccgcaaagcc gcagccgtct ccggagtctt ctgatgcttt
      181 gacactatgg cgtattcgta actgaccagc ggataggacg tcgctcccgg tgcgaaagcc
      241 aacgtcagcc gctcatccgg cggcgtgcgc gggcccagag cggccgcgcc ggcgatgatg
      301 ccttccttgg tcggcagcac aaaatcgccg tcattgtttt tcagcgctac ggtgcccagt
      361 tcggcggatg cgatggcatc ggcgaagctg acaccgacgt agccgatgga gtacggcgtc
      421 gcctgaatgg tcttgaccat gccgtcattg ccggtcgccg ccaacccgcc gggtactgcg
      481 ggccacgtga tcgtcgtggc gtagcctttg tcatcctccc acgacggcgt cgagaacgac
      541 aaaaactgcg taagcatgaa ggtgtcgccc gagccctcgc cgcgatgcac cgggatgatc
      601 gcctgatgcg gcagggtgac gccctggttc atggcgacga tctgtggcgc gtcccagtat
      661 cggacagcac cggtataaat cccggcgatg gtgggtccat cgagctgcag ctgcgatttg
      721 accccgggca cgttgtaatt gatcgtctgc gccgcaatcg ccaacggaat gttcatcaca
      781 tccggcgtcg cccttacctg ggcgtccgac atatacgcgt ccgacgcacc aatctccacg
      841 gctccggatg aggcctgcct gatcccggcc tccgagccgg tgccgccaat ggtgatcgtc
      901 accccgggat ggtttttccc gtactcggag acccagattt ggagcagcgg ctgcaacagg
      961 gtcgagccgg tctcggtcag cgtgatgtca gcggcgcggc cggcgcacgg cgccaggaca
     1021 gtcaggacaa gaccaagacc gatgacgccc aacgaggcag ccagcttgct ggtgcggtgg
     1081 ttcattctga tatccttccg tggatgaagc gccgtcgcag gatggctcag cggccaatct
     1141 ctgcgaggct cacgccgttg gtctcgatcc ggtacaccca ggtcaccaca gcgccgagca
     1201 gcgaggtccc aacgaggatg tagagcagcg cgctggtacc gatgctgacc agcaggatcg
     1261 ggaacaggaa cgccgtggac accgcaccga tcttaccgac cgccgccgca aatcccgcgc
     1321 cgacgccacg gatttcagtc ggaaacacct cgccggcgag cagataggtc tgcgcgttcg
     1381 gaccgatgtt ggtcatgaag ttgaacagca tgaagccgac gaagatcagc aaggtctgcg
     1441 tgccgcccac gaaattgtcg gccagggcgg cgaccagcaa tccagcggcg cagccaatga
     1501 agccgagcac ctgtagccag atgcggccaa cccgatccgc gagcaccacg gcaaagccga
     1561 tgccgataat cagcagcgtg gtggtcatgg ccgcaccctt ggcggccagg atgtcattca
     1621 ggatcagatc gctgacgctg cgcacgtgat cggcggtttt tcccaacgtg gccgccagga
     1681 tggtgggagt gaaaatgccg atgccgtagg tgccgagatc ctgaatgaac cagggcaccg
     1741 aggagaagat cgtggcgcga agattctgcc gcctgaacag cgcggggaag ccgccggagc
     1801 cgtgtccctc ggccgccgcg gcggtgtcgc gcaccagttt gaccgtgccg ggataaatcg
     1861 gcgcccgcag caacaggcgt tgcgcggctt cctcggcctt ctcggtcgcg ccgcggatgt
     1921 gcagccagtt ggcactctcc ggaataaaga agcggccgat ggtaacgatc accgccggga
     1981 tgatggcggt ggcgtacatc cagcgccatg catccaggcc agggtcggcc acgaggacaa
     2041 aatagccgac cgcagtgccg ccaagtgcac cgatcgcctg aaaagcgaac gcagccagca
     2101 ccagcttgcc gcggctggtg ctggggatgc tctccgaaat gatcatgtgc gcggtggggt
     2161 aatcgcagcc aagcgccacc ccgagaccga acaggcagac gatcagcgaa acgaaattgg
     2221 tgcagaacac cagcgccacc agaaaggcgc agaagatgat catctcgatg atgaacatgc
     2281 gcttgcgccc gaacgcgtcc gacatgccac cgaggccgat ggcgcccacc aggatacccg
     2341 ccaggctggc ggcgctgatc aggccgttct gggctgaacc gatctcgaac tcgcgcgaga
     2401 tcagcggcaa cgcgacaccg gtcatgaaca cgacaaagcc ctcgaagaac ttgccggccg
     2461 cggcgagcgt ccagatgcgc ttttgcatgg cggtcagctc gacggtcggc agcagcgtgc
     2521 cgtcgggcca catcgggcgt tcatcgatgt aatgctggac cgacggtttt ccgatttcgc
     2581 cggactggct cattcgctga gcttcagaca tggtcgctgt tccttactta cgctctgtgc
     2641 gccgttacgc tttgtgcgag gggccgaggc catgcacccg cccgcatttc ggcaggtttc
     2701 atgtgtctga aagtaacgaa accctgtccc cgaattaccg cgcggtaatc ctgccaatcc
     2761 ctggatcagt caactgggca aacaacggac cgcggtcgca gaattattat atttttatta
     2821 catttgtctt tggctcgggc gcgtttggac attgcgcagc ccagtgacga ttcaggatcg
     2881 ttttgggacc gctgtgcggg ctgcgggcag agcgatgccg catgtgactt gcaattatta
     2941 ttcatgatgc ttatcatgaa taaatgcgag tagatcggaa aaccatggcg gcgcaccgcg
     3001 cggccattct acgccaggcc ggccggctgt tccgccagca cggcatcgac ggtgtggccg
     3061 ttgccgatat taccggcgcg gccggcctca cccacggcgc gttttacggt cacttcccga
     3121 gtaagacagc gctggccgcc gaatcatgcc gtcattccct ggaaagctcc gcgcggatct
     3181 ggcgtgagcg cgccgaagcg gctcgatcgt caggagccga cccgctggtt gcgctgatcg
     3241 actcctacct gacaccgagg caccgggatt cgcgcgaagc cagttgcatg ttggcctccg
     3301 tcggccccga ggccagccgc gatccggacc tgcgcgcgga cctggcgatt ggggtcaccg
     3361 ccctgtccct cgtgctgcag gaactgatcg cggagcggca tcctgacgcc gaaccgcagc
     3421 accatctcga ggtcgctctg gctgtgctgg cagcgttgag tggtggactg accctcgccc
     3481 gggcgctttc cgccgatccc gagcgctctg ccgcggccct gcgaagtgcc gccgtgctgg
     3541 ccaaacgcgc cgccgaataa aggattcttc aaaatgctct cgcatttgtt ggcgccggct
     3601 ttggcgcgcc gcggcatcca ctatgggtgg gctgtcgtcg ccgtcacctt cctgaccatg
     3661 ttggcgacgg cggctgccat gggcatgccg ggcgtgttgt tgctgccgct caagggcgag
     3721 ttcgggtggg accttggcca gatttccggc gccctggctt tgcggctgct gctgtacgga
     3781 ctggtcgctc cgttcgcggc cgcccttatg cagcgctatg ggatgcgcgc cgtcgtcgcc
     3841 tcggcgctcg gagtgattgt cgccggcctt gcgctggcaa cgcaaatgac caggctgtgg
     3901 gaactctggt tgacctgggg cttgatgatt ggcctggcga ccggcgtgac cgccaacgtg
     3961 ttaggcgcaa cagtcgccaa tcgctggttt gcccaacgcc gaggtctcgt catcggcctg
     4021 ctcagcgcca gcagtgccac gggccagttg ctgttcttgc cgttggcggc gtggctatcg
     4081 gatcatctcg gctggcgtct ggcgatggcg ccggcaggcg tgctgtgtct gctgtgtctc
     4141 gggctcgtga tccttgtggt gcgcgattat cccggcgaac tcgctctgcc ctcgtttggt
     4201 gagaccgaga tcgtgccgcc gccctcgcgt cgcgccggcg gcaatgccct gaccctgagt
     4261 ttcgcagccc tcagcgtggc cgcaaggaac cggggatttt ggatcctgtt cggcacgttc
     4321 ttcatttgcg gagtgtcgac caacggcctg gtgcagaacc atttcattcc gctttgccac
     4381 gatttcgggt tggacgcggt cgccgcagca agtgtgctgg ccatgatggg agcgttcgat
     4441 ttcgttggca ccatc
//
LOCUS       DATAVD010000728         9033 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2491187, whole genome shotgun sequence.
ACCESSION   DATAVD010000728 DATAVD010000000
VERSION     DATAVD010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9033
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2491187"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(15..2087)
                     /locus_tag="VHX39_13740"
     CDS             complement(15..2087)
                     /locus_tag="VHX39_13740"
                     /inference="COORDINATES: protein motif:HMM:NF036537.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LodA/GoxA family CTQ-dependent oxidase"
                     /protein_id="HEX3992228.1"
                     /translation="MSDTVFRVHPAIGIGRVGDSEEFYIAPVTAAGTIEPSGLMGGLP
                     IKPGTEDTPITADDFRDSDGNVKRQAARFRIYAYPAGSSGTYPNGGGTLVTVGGSIGG
                     KKVVDIVWTVHLANKKLNNYSTVSIKDGKEVFFGIGAYEGLSTLVLRTLGYKGTTNKD
                     DPVRLRELFIDPGPRAIKASGGTAAAVAFDAATPAAYANASAVIVPVPTYPKSFPSDF
                     NTLYEPLGPLTSLGDLRVDDKGGLVVAGGYARTVAVSKDGQPVDPLTQATENGQWYDD
                     AADGPVNAVIVFDDNTTAAVQAGWYVTGDPGYAPQTRNIISVWDDVYDVWVRELGLVP
                     SLYANGQYQASYKPSFPDDIQPIFHACMLQRWNTNLPSVAVSNHDMIGAIKPTDDPTS
                     KIPNLKTLLRDPNSTADTATGAPMMPLSLGDANKSFLSVSQTQYCLLTQWHAKTYLPG
                     PGPALGPGEILDKITLENCLGGRYSPGIEVSFPIRDVNLFIQDWQKQDCGPFRINQAP
                     LDYSKATADKPFLTFGYIPLQAIPVEPGDISKAMSVPWHTDYNSCATHLPDPNPQGNN
                     TLFWSWPAERPVAVYPVSLCQYDAGSKTWAVGQQIYSVRGAGTDTDYPAQVGRFQKYP
                     DFVDNWFKVGFVIEASQIAASAGNAPYPNNIFLEVQSKFDVGSDYVPPWPTADVPHYK
                     APPPERGR"
     gene            complement(2128..3456)
                     /locus_tag="VHX39_13745"
     CDS             complement(2128..3456)
                     /locus_tag="VHX39_13745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992229.1"
                     /translation="MGSKLLAGAVVAALWAATCTPVMAQQPAPTCTAPSTWFPHSQTP
                     EQNSAGFPATPTNCDFHQWSWNAFLWLTQDIKGEPRFEHMPANGIETKPGVLDALIGR
                     SAKARTLDIVAQAGPDGIMVDLQGHPIYYSIHSDSTFGNFLKQNHLLDPAKLRAFSPT
                     ESFPVNTLTLKAAWKVVAPGEDVSTFYTRKAQIALLTTRNGKIVLSGKTKSVEVALVG
                     FHIGGTVANHPEMIWATFEHLQNAPDLPKPMNSMGPNDIVSDKDWTFYKANTPFKSCN
                     VNSAGSGALTLNEATQTLSPVTEVCRMIPYGGGSDTNIANIKSLNDSVYSQLKGVWNN
                     YFDVGAIWFSTNNALKPNCTFQPGSLECPATPGKPILTGSTQLSNTTVETFTQSQSAQ
                     DNCFACHNTVQVTSPNTTAPSLPGLNVGISHVLINEYFAAASKPAAKAKH"
     gene            complement(4173..4964)
                     /locus_tag="VHX39_13750"
     CDS             complement(4173..4964)
                     /locus_tag="VHX39_13750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992230.1"
                     /translation="MTALLWLPPVAKAVTTALLVVVASVLAEALGPLWGALVASLPVS
                     AGPAYVFLAMRHGGDFVAASALSSAAANAATGLFLIVYAIQARRAPLWRGLGVAVAVW
                     LVASLTIRQVMWTPATAMLVNLVVYGGGFLLLGRIGKVAHDAGTATRRRWFDLPLRAA
                     AVALFVSTVVGVSSILGPEATGIAAVFPISLISLVVILHPRIGGAASARLASTALRAM
                     LGFGVMLLVLHLAIQPLGTAAALVVALAVSLLWSGGLLVLGRWRH"
     gene            complement(5086..6078)
                     /gene="pdxA"
                     /locus_tag="VHX39_13755"
     CDS             complement(5086..6078)
                     /gene="pdxA"
                     /locus_tag="VHX39_13755"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014105845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0042823 - pyridoxal phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEX3992231.1"
                     /translation="MKPLALTMGDPAGIGGELSVKAWLALREAGPTFVALDDPVRLTR
                     VAASMGLSVPVRAVSHAAEANATFRSALPVLPVPLAAAAVPGRPDPANATAVVASIEQ
                     ATKLALAGFVGGIVTNPINKAALYQAGFTYPGHTEFLAALTGVPGREIMMLASPLLRV
                     VPVTVHVSLRESIAMLTTEMIVAASRTTAAALRRDFGIASPRLAIAGLNPHAGEQGAL
                     GKEDLAVVQPAIDALRAEGIDVSGPWPPDTMFTVAARARYDVAICMYHDQALIPLKTL
                     DMDHGVNVTLGLPIVRTSPDHGTAFDIAGKGVADPTSLLAAIELAGTLAAGRQT"
     gene            complement(6082..7473)
                     /gene="lpdA"
                     /locus_tag="VHX39_13760"
     CDS             complement(6082..7473)
                     /gene="lpdA"
                     /locus_tag="VHX39_13760"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEX3992232.1"
                     /translation="MSDSFDVIVIGSGPGGYVCAIRAAQLGLKTACVEKRATLGGTCL
                     NIGCIPSKALLQSSEEFEKTKHALKDHGVLVDGVTLDLTRMQARKGEVVTANTKGVEF
                     LFRKNKVTWLKGTGRITAPGSVDVDGTVYTTKNIIIATGSDSVPLPGVAVDEKQIVTS
                     TGGLELDKVPGHLVVIGGGVIGLELGSVWRRLGSEVTVIEFLDRIVPGMDTEIATAFQ
                     RILQKQGFKFRLGMKVTNAATAADGVTLTVEPAKGGAAETVKADVVLLSIGRRPYTEG
                     LGLEAAGVELDDRKRVKVDKHYATNVPGIYAIGDVIAGPMLAHKAEDEGVAIAEILAG
                     QAGHVNYGAIPGVVYTWPEVASVGATEEELKAGGIAYNVGKFPFTANGRARAMGDTDG
                     FVKVLADKTSDRLLGAHVLGPDAGTLIAELTTAIEFGASAEDVARICHAHPTLSEAVK
                     EAALAADGRALHM"
     gene            complement(7474..8124)
                     /locus_tag="VHX39_13765"
     CDS             complement(7474..8124)
                     /locus_tag="VHX39_13765"
                     /inference="COORDINATES: protein motif:HMM:NF037407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992233.1"
                     /translation="METQTSTKVDRRRREIAASYRKQGYRVTAPSVAEALPPFLHDCH
                     PDLIAEKEGDRVVIEIKPSHALKGANDLIELADRVAAEPGWRLELVTVASEPDNRDLL
                     APDWLERMLLAPSAGTEIVYRCIYLGQVLAYLIQGMALGNNIRVRDKTERHLARELVY
                     AGALDQDLLDRIEGALAWRDQVMHRMPVSRSATQQAAELEQLCRDLHHMQAQRIED"
     gene            complement(8124..8492)
                     /locus_tag="VHX39_13770"
     CDS             complement(8124..8492)
                     /locus_tag="VHX39_13770"
                     /inference="COORDINATES: protein motif:HMM:NF017663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HEX3992234.1"
                     /translation="MSAQTAYRAALQAWKQRVRSACVSAWKPAERPIEGPVRLRITFY
                     REFKLGDVDNLVKPIQDALQGVAYHNDRQVTDVTGRGRDIDSAFKVRYMSPALAMAFS
                     DGRQFVHIEVWQNPDQEAVN"
     gene            complement(8583..>9033)
                     /locus_tag="VHX39_13775"
     CDS             complement(8583..>9033)
                     /locus_tag="VHX39_13775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019090643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HEX3992235.1"
                     /translation="DGDDIVYKNFVNMGIAVGGPSGLVVPVIRDADQLGFAGIEGAIA
                     DFGKRARDGALKLDDLAGGTFSITNGGVYGSLMSTPILNPPQSAILGMHKIQDRPVVV
                     AGKIEIRPMMYLAVSYDHRIVDGKEAVSFLVRVKEGVEDPRRLLLDL"
BASE COUNT         1637 a         2875 c         2810 g         1711 t
ORIGIN      
        1 tcccggttca gccgttaccg cccgcgttcg ggcggggggg ccttgtagtg cggcacgtca
       61 gcggtcggcc agggtggcac gtaatcgctg cccacatcga acttgctttg cacttccaga
      121 aagatgttgt tcggataggg cgcattgccg gcgctcgcgg cgatctgcga agcctcgatc
      181 acgaagccga ccttgaacca gttgtcgacg aagtcgggat atttctggaa ccgcccaact
      241 tgcgccgggt agtcggtgtc cgtaccggcg ccgcgcaccg aataaatctg ctggccgacc
      301 gcccaggttt tggagccggc atcgtattgg cacagcgaca ccggatagac cgccaccggg
      361 cgctccgccg gccacgacca gaacagcgtg ttgttgcctt gcggattggg gtcgggcaag
      421 tgcgtggcgc aggaattgta gtcggtgtgc caaggaaccg acatcgcctt ggagatatca
      481 cccggctcca ctggtatcgc ctgcaacgga atatagccga aggtcaggaa cggcttgtcc
      541 gcggtcgcct tgctgtaatc cagcggtgcc tgattgatac ggaacggacc gcaatcctgt
      601 ttctgccagt cctggatgaa caggttgacg tcccggatgg ggaacgaaac ctcgatgccc
      661 gggctgtagc gcccgcccag gcaattctcc agcgtgatct tgtcgaggat ctcgccggga
      721 cccagcgccg gaccggggcc gggcaggtag gttttggcgt gccactgggt caacaggcaa
      781 tattgcgtct gactgaccga cagaaagctc ttgttcgcat cgcccagcga cagcggcatc
      841 atcggcgccc cggtcgcggt gtcggcggtg gaattcggat cgcgcaatag cgtcttgagg
      901 ttggggatct tggatgtggg atcgtcggtc ggcttgatcg cgccgatcat gtcgtgattg
      961 ctgaccgcca ccgacggaag attggtgttc cagcgctgca gcatgcaggc gtggaaaatc
     1021 ggttggatgt cgtcaggaaa tgacggcttg tagctggcct ggtattgccc gttggcatac
     1081 aggctgggca ccaggcccag ctcacgcacc caaacgtcgt agacgtcatc ccacaccgaa
     1141 atgatgttgc gggtctgcgg cgcgtagccg gggtcaccgg tgacatacca gcccgcttgc
     1201 acggccgcgg tggtattgtc gtcgaacacg atgacggcgt tgaccggccc atcggcggcg
     1261 tcgtcatacc actgcccgtt ttcggttgcc tgggtcagcg gatcgaccgg ctggccgtcc
     1321 ttgctgaccg cgacggtccg ggcgtagccg ccggcgacca ccaggccgcc tttgtcatcg
     1381 acccgaagat cgcccagcga ggtcagcgga cccagcggct catagagcgt gttgaaatcg
     1441 gaggggaagc tttttggata ggtcggcacc ggcacgatga cggccgaggc attggcatac
     1501 gccgccggcg tggccgcatc gaacgccacc gctgccgccg ttcccccgga cgccttgatc
     1561 gctcgggggc caggatcgat gaacaattcc cgcaggcgca ccggatcgtc cttgttggtg
     1621 gtgcctttgt agccgagcgt gcgcagtacc agcgtcgaga ggccctcata ggcgccaatg
     1681 ccgaagaata cttccttgcc gtctttaatg ctgaccgtcg agtagttgtt cagcttcttg
     1741 ttcgccagat gcacggtcca gacgatgtcg acgaccttct tgccgccgat cgaaccaccc
     1801 accgtcacca gggtgcctcc gccattggga taggttccgg agctgccggc gggataggcg
     1861 tagatgcgga agcgcgccgc ctgccgtttc acattgccgt cgctgtcgcg gaaatcgtcg
     1921 gcggtgatcg gcgtatcctc ggtgccgggc ttgatcggca ggccgcccat caagccgctg
     1981 ggctcgatgg tgccggcggc ggtcaccggc gcgatgtaga attcctcgct gtcaccgacg
     2041 cgtccgatgc cgatggcggg atgaacgcga aaaacagtgt cggacatgat cttggctcct
     2101 ctggcccgat gggtcggcag tcagcgccta atgtttcgcc ttcgccgccg gcttggacgc
     2161 ggcggcaaag tattcattga tcagcacgtg gctgataccg acgttcaggc ccggcaggga
     2221 tggcgccgtc gtgttgggcg acgtgacctg caccgtgttg tggcaggcga aacaattgtc
     2281 ctgcgcgctt tgtgattggg tgaaggtctc aaccgtggtg ttcgacagtt gcgtcgaccc
     2341 ggtcaggata ggcttgccgg gcgtcgccgg gcattccagg ctgccgggct gaaacgtgca
     2401 gttcggtttc agggcgttgt tggtggagaa ccagatcgca ccgacatcga agtagttgtt
     2461 ccagacaccc ttcaactggg agtacacgga atcgttcagc gatttgatgt tggcgatatt
     2521 ggtgtctgaa ccgccgccgt acggaatcat gcggcacacc tcggtgacgg gactcaatgt
     2581 ttgcgttgct tcgttcagtg tcagcgcgcc ggaaccagcg gaattgacat tacagctttt
     2641 gaacggcgtg ttggccttgt aaaatgtcca gtccttgtcc gacacgatgt cgttcgggcc
     2701 catcgagttc atcggtttgg gaagatcggg ggcgttctgc aaatgctcga acgtggccca
     2761 gatcatttcc ggatgattgg cgaccgtgcc gccgatgtga aagccgacca gagccacctc
     2821 taccgacttc gtcttgccgg acaggacgat cttgccgttc ctggtggtca atagcgcgat
     2881 ttgcgccttg cgggtataga aggtcgaaac atcctcaccc ggggcgacga ctttccaggc
     2941 cgccttcagc gtcaaagtat tgacgggaaa cgattcggtg gggctgaacg cgcgcagctt
     3001 cgccggatcc agcagatggt tttgcttgag gaagttgcca aatgtggagt cggaatgaat
     3061 cgaatagtag ataggatggc cctggaggtc gaccatgatg ccatccggcc cggcctgtgc
     3121 gacaatgtcg agtgtccggg ccttcgccga acggccgatc agcgcatcca gcacaccagg
     3181 tttcgtttcg atcccgttcg ctggcatatg ttcgaaccgc ggctcacctt tgatatcctg
     3241 ggttagccac aggaacgcat tccacgacca ttgatggaaa tcgcagttgg tcggggtcgc
     3301 cggaaagccg gcggagtttt gctccggcgt ctggctgtgc ggaaaccagg tggatggggc
     3361 agtgcaggtc ggggctggct gctgcgccat gaccggtgtg cacgtcgctg cccagagcgc
     3421 cgcgaccacg gcgcccgcga ggagtttcga tcccattcca catctccata atcgacggga
     3481 ggctggcgcg tgcctataca tgccggcgtt caacacaccg gcttttcgtt gctttacagc
     3541 taccatacgc cgaggcgacg taaattgtca aactaagatt gcataccgta atcagtacat
     3601 tgcgacaacg gtacgattgt attgtctaaa tttgacaccg atacgtcatt atatgggaaa
     3661 ttctagccaa atcccgcgat ttggatgcac ttcgtccgga gggcgtgagt agagtccgga
     3721 gcttgataga ttgcattcca atgatattgt gctgatagca actcttggat caatcgtcgc
     3781 ccgaatagac tacgcgtcgg cgacagcagt catgtcatgc catgtcagcg atcttcgatg
     3841 gcgtcgggcc tccttgtgga attgctcatg tcgtcgccat cgatgacatc ggttttcacc
     3901 tggctataac gagtgagcgc ggaagcgtcg ggacgacata ttccaatcga aaccatcggt
     3961 caggtcagac aacggcaagg ctgcatgatg cgctgcaccg cgtccgcagt gatgacgccc
     4021 cgtgggccgg tgcatcgagc aacgatccgg tctgttgacg gtttgagaac aacatgcaat
     4081 cagttcggcc aagccgatgg cgggttacgt gagcatcatc aggtatggcg aatccgtcat
     4141 cgccagccga tccagccata tatgatgtac agtcagtgcc gccagcgacc caaaacaagc
     4201 agtccgcccg accaaagaag cgacaccgcc aacgcgacga caagagccgc cgccgtgcct
     4261 aatggctgaa tggccaggtg caggacaagc agcatcacgc caaatcccag catcgcgcgc
     4321 agggctgtcg atgcaagcct tgcggacgcg gcgccgccga tacgggggtg caggataacg
     4381 accaggctga tcaggctgat cgggaatacc gcggcgatgc cggtcgcctc gggcccaagt
     4441 atcgaactga caccgaccac ggtcgagacg aacagtgcca cggcggcggc gcgcaatggc
     4501 aggtcgaacc aacggcgcct ggtcgcggtg ccggcgtcat gcgccacctt gccgatccgt
     4561 cccagcagga ggaatccgcc gccgtagacc accaggttga ccagcatcgc cgtcgccggc
     4621 gtccacatca cctgccggat cgtgaggctg gcaaccagcc ataccgccac ggccacaccg
     4681 aggcctctcc acagcggcgc tcttctggcc tggatggcat agacgatcag gaacagcccg
     4741 gttgccgcgt tggcggcggc gctgctcagc gcgctggcgg cgacgaaatc gccgccatgc
     4801 cgcatggcga ggaacacata ggccggccca gccgagacgg gcaggctggc gaccagcgcg
     4861 ccccagagtg gaccgagcgc ctcggccagc acggacgcaa cgacaaccag caaggccgtc
     4921 gttacggctt tggcaacagg cggcaaccat aaaagggcag tcatgggtta cgaccatccg
     4981 cctgccgggc ggatccggac cgcccttcga caggactcgg cggccggact tagggtcgga
     5041 gcgtgcgtgc tcgccaggtc agatgccgcg atcgggcgag cgctgtcaag tttgacggcc
     5101 ggccgccagt gtcccggcca gttcgatcgc cgccagcagg ctggtcgggt cggccacgcc
     5161 cttgccggcg atatcgaacg cggtcccgtg atcgggggac gtccgcacga tcggcagccc
     5221 cagggtcacg ttcaccccgt gatccatgtc cagcgtcttc agcgggatca gcgcctggtc
     5281 gtggtacatg cagatcgcca cgtcgtagcg ggcgcgtgcc gccacggtga acatcgtatc
     5341 cggcggccag ggaccggaga cgtcgatgcc ctccgcacgc agcgcgtcga tcgccggctg
     5401 caccacggcg aggtcctcct tgcccagcgc gccctgttcc ccggcatgcg gattcagacc
     5461 ggcgatcgcc agacgaggcg acgcgatgcc gaaatcccgc cgcagagccg ccgcggtggt
     5521 gcgcgacgca gccacgatca tctccgtcgt cagcatcgcg atggactcgc gcaacgagac
     5581 atgcacggtc accggcacca cccgcagcag cgggctggcc aacatcatga tttcccggcc
     5641 gggtacaccg gtcagggcgg ccaggaattc ggtatggccg ggataggtga accctgcctg
     5701 gtacagcgcc gccttgttga tcgggttggt gacaatgccg ccgacgaacc cggccaatgc
     5761 cagcttcgtg gcctgctcga tcgacgcgac aaccgccgtg gcgttcgccg gatcgggccg
     5821 ccccggcacg gcggcggcgg ccagcggcac cggaagcacc ggcaacgccg accggaaggt
     5881 ggcgtttgcc tccgctgcgt ggctgaccgc ccgcaccggc acgctcagcc ccatgctcgc
     5941 cgccacgcgc gtcaaccgaa ccggatcgtc cagcgcgacg aacgttggac cggcctcccg
     6001 caaagccagc caagccttca cggaaagctc accgccgatc cccgcgggat cgcccattgt
     6061 cagcgcgagg ggtttcatcc gtcacatatg cagtgcgcgg ccgtccgctg ccagggctgc
     6121 ttccttcacc gcctcgctca gcgtgggatg cgcgtggcaa atccgcgcca catcctccgc
     6181 cgacgcgcca aactcgatcg ccgtcgtcag ttccgcgatc agcgtgccgg cgtccggtcc
     6241 cagcacgtgg gcgccgagca gccggtcgga ggtcttgtcc gcaaggacct tcacgaagcc
     6301 gtccgtatcg cccatcgccc gcgcccgtcc gttcgcggtg aacggaaatt ttccgacgtt
     6361 gtaggcgatg ccgccggctt tcagttcctc ctcggtggca ccgaccgagg ccacttccgg
     6421 ccacgtgtac accacgccgg ggatcgcgcc gtagttcacg tgcccggcct gtccggccag
     6481 gatttcggcg atggcgacgc cttcgtcctc ggctttgtgg gccagcatcg gtccggcgat
     6541 cacgtcgccg atggcataga tgcccggcac attggtggcg taatgcttgt ccaccttgac
     6601 ccgcttgcgg tcatccagtt cgaccccggc ggcttccagt cccagccctt cggtataggg
     6661 gcgccggccg atcgacagca gcacgacgtc cgccttgacc gtctccgccg cgccgccctt
     6721 ggccggctcc accgtcaacg tcacgccgtc ggcggccgtc gcggcgttgg tcaccttcat
     6781 gcccaggcgg aacttgaacc cctgcttctg caggatgcgc tggaatgcgg tggcgatctc
     6841 ggtgtccatg ccggggacaa tccgatcgag gaactcgatc accgtcactt cggagcccag
     6901 ccggcgccag acgctgccca gttccaggcc gatcacaccg ccgccgatca cgacgaggtg
     6961 cccgggaacc ttgtccagct ccagtccgcc cgtggaggtg acgatctgct tttcatccac
     7021 cgccacgccc ggcaacggca cgctgtcact gccggtggcg atgatgatgt tcttggtggt
     7081 gtagaccgtg ccgtcgacat ccacgctgcc cggcgcggtg atgcggccgg tgcccttcag
     7141 ccacgtcacc ttgttcttgc ggaacaggaa ctcgacgccc ttggtgttgg cggtgacgac
     7201 ttcccccttg cgcgcctgca tccgtgtcag gtccagggtc acgccgtcga ccagcacgcc
     7261 gtgatccttc agcgcgtgct tggtcttctc aaattcctcg gacgattgca gcagcgcctt
     7321 ggacgggatg cagccgatgt tcaggcaagt gccgccaagc gtcgcgcgct tttccacaca
     7381 cgctgttttc agcccaagct gcgccgctcg gatggcacag acatagccgc cggggccgga
     7441 gccgatgacg ataacgtcga aagaatcgct catttagtcc tcaatgcgtt gagcctgcat
     7501 gtggtggagg tcacggcaga gttgttcgag ttcggcagcc tgctgggtgg ccgaccgcga
     7561 aacaggcatc cggtgcatca cctggtctcg ccatgcgagt gcgccctcga ttcgatcgag
     7621 aagatcttga tcgagcgctc ctgcgtaaac cagttcgcgc gcaagatgcc gctccgtttt
     7681 gtctcggacc cggatgttat tgcctaaagc catgccctgt atcaggtacg caagaacctg
     7741 gccgagatag atacaacggt agacaatctc tgtaccggct gacggcgcga gaagcatgcg
     7801 ctcaagccag tctggcgcga ggaggtcccg gttgtcaggc tctgaggcaa cagtcaccag
     7861 ttccaggcgc catccgggtt cggcggccac ccggtccgcc agttcaatca gatcgttcgc
     7921 gcccttgagc gcgtgggatg gcttgatctc gatgaccacc cggtcgccct ctttctcggc
     7981 gatcaggtcc gggtggcaat cgtgcaggaa gggaggcaat gcttcggcta ccgacggcgc
     8041 ggtcacgcga tagccctgct tcctgtagga tgcggcgatc tcgcggcgtc ggcgatccac
     8101 tttcgtgctg gtttgtgtct ccatcagttg accgcctcct ggtcaggatt ttgccatacc
     8161 tcgatatgga cgaattgccg tccgtcgctg aacgccatgg cgagagcagg cgacatatac
     8221 ctgactttaa aggcgctatc gatatcccgc ccccggccgg tcacgtctgt aacctggcgg
     8281 tcgttgtggt aggcgacgcc ttgcagggca tcctggatgg gcttcaccaa gttatccacg
     8341 tcgccgagtt taaactcgcg ataaaacgtg atgcgcagcc tgaccggccc ttcgattggc
     8401 cgctcagccg gtttccatgc cgagacgcac gccgaccgaa cacgttgttt ccaggcctgc
     8461 aaagccgccc ggtatgccgt ctgagcagac accggctaac cgtgaacgca gaaatcaagg
     8521 acacggggtg gctccgattc atctctattc cgcgcccgcc tggccatccc acggtgctgt
     8581 tactacagat ccagcagcag ccggcgcggg tcttccacgc cttccttgac gcgcaccagg
     8641 aacgacaccg cctctttccc atcgacgatc cggtgatcgt acgacaccgc gagatacatc
     8701 atcggccgga tctcgatctt ccccgcaacg accaccggcc ggtcctggat cttatgcatg
     8761 cccaggatcg ccgactgcgg cgggttcagg atcggagtgg acatcagcga cccgtagacg
     8821 ccgccgttgg tgatgctgaa cgtgccaccc gccagatcat ccagcttcag cgcgccgtca
     8881 cgcgcccgct tgccgaaatc ggcgatcgca ccttcgatcc cggcgaaccc aagctgatcg
     8941 gcatcccgga tcaccggcac caccagaccc gagggaccgc ccaccgcgat ccccatattc
     9001 acgaaattct tgtagacgat gtcgtcgccg tcg
//
LOCUS       DATAVD010000729        11635 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3607158, whole genome shotgun sequence.
ACCESSION   DATAVD010000729 DATAVD010000000
VERSION     DATAVD010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 11635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11635
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3607158"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..874)
                     /locus_tag="VHX39_13780"
     CDS             complement(<1..874)
                     /locus_tag="VHX39_13780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3992236.1"
                     /translation="MTALLVAFLVSTIAAATPLLLAATGELVVERVGVLNLGVEGMML
                     AGAIAAFATANQTGITSLGILAALVAGIALALLFAVVSLTLQANQTATGLALTIFGRG
                     FSALVGAGYVGIPAPTLPKLHIPLLSDIPVLGPVVFSHDILVYASLAILAIVAWSIRS
                     THLGLIFRAVGDSHDAAHALGYSVVPIRFAAVAFGGALAGLAGAYMSLAYTPLWAQDM
                     TAGRGWVAVALVTFSAWRPFWLLIGAWFFGALMYLSLYVQALGVAIPSALLSALPYIG
                     TVVVLVLISRDARRI"
     gene            complement(871..1956)
                     /locus_tag="VHX39_13785"
     CDS             complement(871..1956)
                     /locus_tag="VHX39_13785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3992237.1"
                     /translation="MLKIEPRGVESKFWRYASPILALLLTGTTSGLIFLSMGRPAGLT
                     VYTFLVAPLLQQDGLQALVVKAAPLIMMGVGLSLAYRANVWNIGTDGQFTLGAICGGG
                     LALAFPDAPSWAIFPAMMVVGTMGGMASGGLVAWLRIRFNANEILTSLMLAYITQYLL
                     VYLVVGPWRDPQGFGFPQTALFSDAAAGPRLIADSNVHIGILLAPLVAVALWFMLEKS
                     LLGFQFRVLGQATRAAKFAGFSENRLVWIAMLVSGGLAGLAGLLEATGTLGQLTTTLS
                     PGYGFTAIIVAFLGRLNPLGAIPAGLLLALTYLGGDAAQINLGLPNAVTGIFQGILLF
                     YLLGCDFLLLHRVKFVSRAPAAVRAAS"
     gene            complement(1949..3511)
                     /locus_tag="VHX39_13790"
     CDS             complement(1949..3511)
                     /locus_tag="VHX39_13790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3992238.1"
                     /translation="MVDPTPPGPLLQLTGVTKQYPGCLANDHVSLTIERNQIHALLGE
                     NGAGKSTLVKIIYGVVKPDEGEIVWEGQPVTIQNPGQAQRLGIGMVFQHFSLFEALNV
                     TENIALGLASKDERAGLRERIVKVSTEYGLPLDPDRVVHDLSVGERQRIEIVRCLLQN
                     PKLLIMDEPTSVLTPAEVRTLFVTLRRLAAEGCSILYISHKLEEVRALCSAATIMRLG
                     RNVARVVPAEKTVKELAEIMINMDLHAPTPRPRMETGAQARLQLDHLTIRSPNHFGTD
                     LKDISLSIAGGEILGIAGIAGNGQTELMDALSGEILSGKPENVMIDGVPAGHMGPHER
                     RRIRGCYVPEERNGHGAVTTMTLAENAFLSGFLRHALVRFGVINNKRTHDFADNIIKT
                     FDVRTTGPKAEARSLSGGNLQKFLVGREVLQEPSVLVINQPTWGVDAGAALAIHEAIM
                     ALAQKGTAVMIISQDLDEIFVLADRIAVIAGGRISQPVPTRDATIEAIGRLMGGTATA
                     DAAPSERQPVHA"
     gene            complement(3536..4618)
                     /locus_tag="VHX39_13795"
     CDS             complement(3536..4618)
                     /locus_tag="VHX39_13795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX3992239.1"
                     /translation="MLRRQFTRLAGIGAAMSAVPSLIRPAQSAEPLKVGFIYLGPVGD
                     FGWTYQHDIARKAAVEKFGDKIKTTFVENVAEGPDSEKVLNDLANSGHKLIFATSFGY
                     MNYVMNSAKKHKAVFYEHATGYKRAENVSTYNIRFYQARYVQGVIAGKLSKAGLAGYV
                     GSVPVPEVVQGINAFMLGMQSINPKARMKFVLINSWYDPPKEGDAAKALIDQGCDIIT
                     QHTDSPAPLQAAASRGVKAFGQSTDMSKFAEGTQLSASTDVWAPYYIKRIDDVLAGTW
                     KSTDTWGGFDSGMLAMSPFTNMPPDVAALATSTVADVKSGKNKVFVGPIMDQTGAVKV
                     PAGTTMDDGALSGMQWLVQGVEGKLS"
     gene            complement(4722..5189)
                     /locus_tag="VHX39_13800"
     CDS             complement(4722..5189)
                     /locus_tag="VHX39_13800"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HEX3992240.1"
                     /translation="MTDEDYLRLTFDIALQSRASGNHPFGAILVGPDGTVLMRAGNAH
                     GDAGDRTGHAERVLMTEASLAYSADFMAGCTLYSSAEPCAMCAGAAYWAGVGRVVYGL
                     SERDLGRLIGPHPENLTMNLPCRIVLGAGQRPIDVIGPLLEAESRAVHEGFWT"
     gene            complement(5186..5656)
                     /locus_tag="VHX39_13805"
     CDS             complement(5186..5656)
                     /locus_tag="VHX39_13805"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HEX3992241.1"
                     /translation="MSPDDHMRRAIALSLEMMRSGKGGPFGAVIVQAGNIIAEGFNQV
                     TSNFDPTAHAEVTAIRLACQALQTFDLTGCEIYTSCEPCPMCLGAIYWARLDRIYFAN
                     NRNDAAAIGFRDDFLYHEIALPLEQRAIPTLPLLRAEGQLAFAEWDLKPDKVQY"
     gene            5716..5973
                     /locus_tag="VHX39_13810"
     CDS             5716..5973
                     /locus_tag="VHX39_13810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992242.1"
                     /translation="MPDLRRDHAVADRRTGVDTIVECHAIANLPPAGTLFRNRNILPP
                     HHFRTTLPVSADAKGNRGSRATVIVRGWSAFLAIRSTQIAG"
     gene            6295..6960
                     /locus_tag="VHX39_13815"
     CDS             6295..6960
                     /locus_tag="VHX39_13815"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HEX3992243.1"
                     /translation="MIAIDAEPYAFEFEPAHTALLIIDMQRDFLEPGGFGEMLGNDVA
                     QLRRTIEPNRRLLAAWRAAGLMVMHTREGHRPDLADLPPAKKIRGRSATCIGDAGPMG
                     RILVRGEAGHDIIPELYPAAGEPVIDKPGKGAFFATDLHAILQNSGITRLVVTGVTTE
                     VCVNTTVREANDRGYDCFVPADCVGSYFPDFQEMGLRMIKAQGGIFGWVGNSDAVIAA
                     LKQ"
     gene            6997..8562
                     /locus_tag="VHX39_13820"
     CDS             6997..8562
                     /locus_tag="VHX39_13820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992244.1"
                     /translation="MLSRPKFWVPGDWNALFGFGTNILVNVLVLTGLLRFVLQMPDAL
                     VFGRILPALGLMLFLSTGYYAFLAWKLAKDTGRTDVCALPSGISVPHMFVVTFVVMLP
                     IMIATKDPIQAWEAGLTWVFVQSFVLMAGGFIGPYIRKITPRAALLGSLAGISITFIS
                     MSPAAQVFTTPVIGVVCFAVILANWFGGVKYFGGVPGGLVAIFVGTVIAWGSNLFGLG
                     FGDLTLAKLTGSFSNFGFSYPIPAFMYTFGGFKYLGVILVTAIPFGIYDLIEALDNVE
                     SASAAGDSFPTTRVLTADGVISLIGCLLGNPFINAVYIGHPGWKAMGGRIGYSAVTGI
                     IVLVLTWFGIIAVMMALIPVVAILPILLYIGMLIGSQAFQESPHRHAPAIVLALLPQI
                     AAWGHTQINNALGAAGTNAVTVGYAKLAQVGVLYQGLQTLGGGATLAGIILGAITVFI
                     IDREFDKAAGFAFAGAIFTFFGFIHGEAIQVGSSITVAVGYLGVAGILFFLSKYAEFH
                     PLPVDVHGAQEAD"
     gene            complement(8618..9067)
                     /locus_tag="VHX39_13825"
     CDS             complement(8618..9067)
                     /locus_tag="VHX39_13825"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX3992245.1"
                     /translation="MPEVTVPKSPASPTRMESAMRSYTMVLAVVMVAFSAAAPAMAQS
                     ESPSYAAYMTTDHNMRSSKLIGLPVYNDHGDKIGVIDDILMPAKGGADTAVVSVGGFL
                     GIGAKLIIIPLSHVQFTSSKLMMMGDGSKTALMAMPSYSYSGGSSGG"
     gene            complement(9145..9477)
                     /gene="uraH"
                     /locus_tag="VHX39_13830"
     CDS             complement(9145..9477)
                     /gene="uraH"
                     /locus_tag="VHX39_13830"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019628 - urate catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HEX3992246.1"
                     /translation="MHALDMALGQPAVGLPLSLFRIGNVVRTQLGAWHTNADGRCDAP
                     LLAETTLLPGVYEIVFNVGAWRDKAGAGDAGFYDLIPIRFRITDPSAHCHIPLLLSPY
                     GYSTYRGS"
     gene            complement(9494..10051)
                     /gene="uraD"
                     /locus_tag="VHX39_13835"
     CDS             complement(9494..10051)
                     /gene="uraD"
                     /locus_tag="VHX39_13835"
                     /EC_number="4.1.1.97"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019628 - urate catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline
                     decarboxylase"
                     /protein_id="HEX3992247.1"
                     /translation="MDRRGIEDELTAGPTIDLATINTLGVDGFTALLGGIFEHSSWVA
                     RAAWTAQPFASVPALHATMVSVVTNSGMERQLALLQAHPELAQTGPLTASSSAEQGSM
                     GLDRLAADEAASFSRLNAEYRSRFGFPFIIAVRGQRDRAAILASLSARLQHAPDQERA
                     TALAEVAKIARFRLDDLVMPAHNGS"
     gene            complement(10021..11238)
                     /locus_tag="VHX39_13840"
     CDS             complement(10021..11238)
                     /locus_tag="VHX39_13840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urate hydroxylase PuuD"
                     /protein_id="HEX3992248.1"
                     /translation="MEIYQSLDWGVLLDWVSLLLRWTHVVAAIAWIGSSFYFIALDAS
                     LRPNPRLDPRVSGESWQVHGGGFYQIQKYVVAPEFLPEHLAWFKWEAYSTWIFGFALL
                     VTTYYANPSVYLLDASVSRIEPLDAVPLALASLVLGWIGYDQLCRSWIGQSTARLATC
                     GFSLLVLVTYGFCHVFSGRGAFLQVGALVGSIMVGNVLFLIIPNQRKTIDALIAGREP
                     AAIWGYQAKQRSIHNNYLTLPVVFVMLSNHYSFTYQTKWNWLILSCIFVASFLVRHYF
                     NTMHTGAAPDWRLWPAAAVPVALAALLTLVDSYSPATNTAEKPISFTEVRIIVDQRCH
                     ICHSAHPKFPAFSEPPKGVMFDTPAQILQYSKQIYAQAVKTHTMPLNNITEITEAERA
                     ALGSWIAAGSRTN"
     gene            complement(11340..>11635)
                     /locus_tag="VHX39_13845"
     CDS             complement(11340..>11635)
                     /locus_tag="VHX39_13845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992249.1"
                     /translation="EFVWFYSLKGLIGIPLDFKGFMNIVMPKGKTGFGGNTYVEILAR
                     PTLSLDVGAMLFNKPHKPDLYFAVELWEHKFGNSDSLPGAEEVAPELGIEVHF"
BASE COUNT         2431 a         3471 c         3477 g         2256 t
ORIGIN      
        1 tgatccgcct tgcgtcgcgg gagatcagca ccaaaacgac caccgtgccg atgtaaggca
       61 gcgcggaaag caatgccgac ggtatcgcaa cacctaacgc ctggacgtat agcgacaggt
      121 acatcagcgc accaaagaac catgcgccga tcagcagcca aaacggacgc cacgccgaga
      181 atgtgaccag tgcgactgcg acccagcctc gtccggcagt catgtcctgc gcccagagcg
      241 gcgtataagc aagcgacatg taggcacccg ccaggccggc caacgctccg ccaaacgcga
      301 cggcagcgaa acggattggc acgacggaat aacccagcgc atgggccgcg tcgtgggagt
      361 cgcccaccgc ccgaaagatc aggccaaggt gggtagatcg gatcgaccag gcaacgattg
      421 cgagaatggc gagggatgca tagaccagaa tgtcatgcga aaagaccacc ggtccgagca
      481 ccggaatatc cgacagcagc gggatatgca gcttcggcaa cgttggtgcg gggatgccga
      541 cataaccggc accgacgagg gcactgaatc cccggccgaa aatcgtcagc gccaggccgg
      601 ttgcggtttg gttcgcctgc aacgtcagcg aaacgaccgc gaacagcagc gccagcgcga
      661 tgccggccac cagcgcggcg agtataccaa gcgaggtgat cccggtctgg ttcgccgtcg
      721 caaaagcggc gatcgcgccg gccaacatca taccctcgac gccgaggttc aggacgccca
      781 cccgctccac cacgagttcg ccggtcgcgg ccagcaacag aggtgttgcc gcggcaatgg
      841 tgctgaccag aaaggcaacc agcagtgcag tcatgacgcg gccctcaccg cagccggtgc
      901 gcgcgagaca aatttcacgc gatgcaacag caggaaatcg cagcccagaa ggtagaacag
      961 caagatgccc tggaagatgc cggtgacggc atttggcagt ccgagattga tctgtgccgc
     1021 gtcgccgccg agataagtca atgcgagcag caaaccggcg gggatcgcac caagcgggtt
     1081 caaccgtccg agaaatgcga caatgatcgc agtgaagccg tagcctggcg acaaggtcgt
     1141 ggtcagttgc cccaatgtgc cggttgcctc cagcaatccg gcaaggccgg caagaccacc
     1201 gctgacgagc atggcgatcc aaaccaggcg gttctcgctg aagccagcga atttggcggc
     1261 gcgcgtcgcc tggccgagca cgcgaaactg aaatccgagc aaggattttt ccaacatgaa
     1321 ccacaacgcg acagcaacca gaggggcaag caaaatgccg atatggacat tgctatcagc
     1381 gatcaggcgg ggacccgcgg cggcatccga gaacaatgcc gtttgcggga agccaaatcc
     1441 ttgcggatcg cgccacgggc caacgaccag gtaaaccagc agatattgcg tgatatatgc
     1501 cagcatgagg ctggtcagga tctcgttggc attgaaacgg atgcgcaacc aggccacgag
     1561 gccgccgctg gccatgccgc ccatggtgcc gacgaccatc atggcgggaa aaatggccca
     1621 ggagggggcg tcgggaaatg cgagggcgag gcctccacca cagatcgcgc caagggtgaa
     1681 ctgtccgtcc gtgccgatat tccatacatt tgcacgatag gcgagcgaaa gtcctacccc
     1741 catcatgatc agcggtgcgg ctttgacgac cagcgcctgc agaccatcct gttgcagcaa
     1801 cggtgccaca aggaacgtgt agaccgtcag cccggcgggc cgtcccatgc tgaggaaaat
     1861 cagtcccgag gtcgtgcccg tcagcaacaa tgcaagaatc ggcgaggcat agcgccagaa
     1921 tttcgattcg acaccgcgcg gttcgatctt aagcatgaac gggctgtctt tcgcttgggg
     1981 cggcatccgc cgtagccgtg ccgcccatca ggcggccgat cgcctcgatc gttgcatcgc
     2041 gtgtcggcac cggttgcgag atccggccac ccgcgatcac cgcgatgcga tcggccagca
     2101 cgaaaatctc gtccaggtcc tgcgagatga tcatcactgc cgtgcctttc tgggccagtg
     2161 ccatgatcgc ctcgtggatc gccagggcgg caccggcatc cacgccccag gtgggctggt
     2221 tgatcaccaa aacacttggc tcttgcaata cttcccgccc aaccaggaat ttttgcagat
     2281 tgccgccaga caatgaacgc gcctcggctt tcggtcccgt ggtgcgcacg tcgaaggtct
     2341 tgatgatgtt atccgcaaag tcgtgtgtgc gtttgttgtt gatcacgccg aagcgcacca
     2401 gggcatgacg caggaagccc gacaggaaag cattttcggc gagcgtcatg gtggtgacgg
     2461 cgccatggcc attgcgttcc tcgggcacgt agcagccgcg gatgcggcgc cgctcatgcg
     2521 ggcccatatg gccggcggga acgccgtcga tcatgacgtt ttccggctta cccgagagaa
     2581 tttcccccga cagcgcatcc atcagttcgg tctggccatt gccggcgata ccggcgatgc
     2641 cgagaatctc gccaccggca atcgacagcg aaatgtcctt gaggtcggtg ccgaaatggt
     2701 ttggcgaacg aatcgtcaga tgatccaact gcaggcgggc ctgagcgccg gtctccatcc
     2761 gcggccttgg cgtcggcgcg tgcaggtcca tgttgatcat gatttccgcc agctccttga
     2821 cggtcttttc ggccggcacg acacgggcga cgttgcgacc cagacgcatg atggtggcgg
     2881 cggaacacaa agcgcgcact tcctccagct tgtggctgat gtagaggatg gagcagccct
     2941 ccgccgccag ccgccgcagg gtcacaaaca gggtacgcac ttccgcgggc gtcagcaccg
     3001 aggtcggttc gtccatgatc agaagtttag ggttttgcaa aaggcagcgg acgatctcga
     3061 tgcgttggcg ttcaccgacc gacagatcgt gcacgacgcg gtcgggatcg agcggcaatc
     3121 cgtattcggt agacaccttg acgatgcgct cacgcagacc ggctctttcg tctttggacg
     3181 caaggccgag ggcgatgttt tcggtgacgt tcaacgcctc gaacaacgag aagtgctgga
     3241 acaccatgcc gatacccaga cgttgcgcct ggccggggtt ctggatggtg accggttggc
     3301 cttcccagac gatctcgcct tcgtcaggtt tgaccacgcc gtagatgatt tttaccagcg
     3361 tgcttttgcc ggcgccgttt tcaccgagaa gagcgtggat ctgattgcgc tcgatggtga
     3421 gcgagacgtg atcgttggcg aggcagccgg gatattgttt ggtcacgccg gtcagttgca
     3481 acagcgggcc gggtggcgtt ggatctacca ttgcgttgcc tctaagtcat gaacctcagc
     3541 tcaacttacc ttcgacacct tggaccaacc actgcatccc ggacaatgca ccgtcgtcca
     3601 tcgttgtccc ggccgggacc ttcaccgcgc cggtttggtc catgatcggg ccgacaaaca
     3661 ccttgttctt gccggatttg acgtcggcga cggtcgacgt ggccagtgcc gcaacgtccg
     3721 gcggcatgtt ggtaaacggc gacatcgcca gcatgccgct gtcgaaaccg ccccaggtgt
     3781 cggtactttt ccaggtacca gcgagcacgt catcgatccg cttgatgtaa tatggtgccc
     3841 acacgtcagt gctggcgctc agttgggtgc cttcggcgaa cttcgacatg tcggtggact
     3901 ggccgaacgc cttgacgcct cggctggcag cggcctgcaa cggcgccggc gagtcagtat
     3961 gctgggtgat gatatcgcag ccctgatcga tcagtgcctt ggcggcatcg ccttccttcg
     4021 gcggatcgta ccaggagttg atcaggacga acttcatgcg cgccttcgga ttgatcgatt
     4081 gcatgccaag catgaaagcg ttgataccct gcacgacttc gggcaccggc accgaaccga
     4141 catatccggc gagaccggct ttgctgagtt tgccggcgat cacaccttgc acgtagcgag
     4201 cctgataaaa tcgaatgtta taggtcgaaa cgttttccgc gcgcttgtag ccggtggcgt
     4261 gttcataaaa caccgccttg tgctttttgg ccgagttcat cacatagttc atgtaaccga
     4321 acgatgtcgc gaagatcagc ttgtgtcccg aattcgcgag gtcgttcagc actttttccg
     4381 agtcgggccc ctcggccaca ttctccacaa acgtggtctt gatcttatcg ccgaattttt
     4441 caaccgccgc cttacgcgcg atgtcatgct gataggtcca gccgaaatca cccaccgggc
     4501 cgagatagat aaaccctacc ttcaacggct ccgccgattg ggctggccgg atgagagacg
     4561 gcactgcgga catcgccgca ccaataccgg cgagccgggt gaactgacgt cttagcatga
     4621 taaactccgt agccctgaat ttggttctgt ttggggaagc caccgcgctg cagcgtttcc
     4681 gttctcgacc gcatgcaaac cgtgcgccag gcggcactgc gtcaggtcca gaatccctcg
     4741 tgtaccgcgc gtgattcagc ttccagcaaa gggccaatca cgtcgatcgg acgttgtccg
     4801 gcaccgagca caatgcggca cggcaggttc atcgtgagat tttccggatg cggtccgatg
     4861 agcctgccaa gatcgcgctc ggacaaccca tagaccactc ggccgacacc agcccaatag
     4921 gcggcaccgg cgcacatcgc gcagggttcc gcacttgaat acagcgtgca accggccatg
     4981 aaatcagccg aatatgcgag gctcgcctcc gtcatcagca cgcgttccgc atgcccggtg
     5041 cggtcaccag catcaccatg tgcgttgccg gcccgcatca gcacggtgcc atcgggaccg
     5101 accaaaatcg cgccgaacgg gtgattgccg gacgcacggg actgaagcgc gatgtcgaac
     5161 gtgagccgca gataatcctc gtcggtcaat actgcacctt gtccggcttg agatcccatt
     5221 ccgcaaacgc cagctgacct tcggcgcgca acaacggcaa cgtcggaatg gcgcgctgct
     5281 ccaacggcag tgcgatttcg tgataaagga agtcgtcacg gaaaccgatc gccgcagcgt
     5341 cattgcggtt gttggcgaaa taaatccggt ccaaccgagc ccagtagatg gcaccgagac
     5401 acatcggaca gggttcgcaa ctggtgtaga tctcgcatcc cgtgagatcg aatgtttgca
     5461 gggcctggca ggcgagccgg attgcggtca cttcggcatg cgcggtcgga tcgaagttgg
     5521 aggtgacctg gttgaagccc tcggcgatga tgtttcccgc ctgaacgatc accgcgccga
     5581 acggaccgcc tttgccggag cgcatcattt cgagcgacaa tgcgatggca cgccgcatgt
     5641 gatcatccgg gctcatgcaa cagcatccgg aaaatctggg gttggtattg gcatcggcca
     5701 cgtgtcgttt tgggtttgcc agatctgcgc cgcgaccatg ccgtcgcgga ccggcgaacg
     5761 ggtgtcgaca cgatcgtcga atgccacgcg attgcgaacc tgccgcccgc cgggaccttg
     5821 tttcgtaata ggaatatcct gccgccgcat cattttcgga caactttacc tgtgtccgcc
     5881 gatgctaaag gcaaccgggg aagcagagca accgtcatcg tgcgcggctg gtccgctttt
     5941 ttggcaattc gttccaccca aatcgctgga tgaattcaac gcatgcgaat tctgtgcaaa
     6001 tggtaatcat ccgcccacaa aataggctgt catgctaacg cgctgattgg accagacacc
     6061 gtgtgctgcg aacattcgtt cgcagggtct gactttcttg ccaggcgaag acctggaggc
     6121 cggtggcatg acagttgcac gtatcatacc gacccgcgca tcgcgcgcgg ggaaagggtc
     6181 agagccgggg atgccagaac cagtttcgac ggtgctgaaa gcctcaattt caaacggcgc
     6241 ttccacgcac cgcttcgctc ctgggcgcca ccctccaaac cggacagcga caccatgatc
     6301 gccatcgacg ctgaacccta cgcattcgaa ttcgagccag cgcacaccgc gttgttgatc
     6361 atcgacatgc agcgcgactt cctcgaacca ggcggctttg gtgaaatgct cggcaacgat
     6421 gtggcccagt tgcggcggac gatcgagccg aaccggcgat tgttggcggc ctggcgcgct
     6481 gcgggactaa tggtgatgca cacgcgcgaa ggccatcggc cggacctcgc cgatttgccg
     6541 ccggcaaaga aaatccgagg ccggagcgcg acctgcatcg gtgacgccgg tccgatgggc
     6601 cgcatcctgg tgcgcggcga ggccggtcac gacatcattc cggagctgta tccggcggcg
     6661 ggtgagccgg tgatcgacaa gcccggcaaa ggcgcattct tcgccaccga tctgcacgcg
     6721 atcctgcaaa acagcggcat aacgcggctg gtggtgaccg gcgtcacgac cgaggtttgc
     6781 gtcaacacca cggtccgcga agccaacgat cgtggctacg actgcttcgt gccggcggac
     6841 tgcgtggggt cctatttccc cgactttcag gaaatgggcc tcaggatgat caaggcccaa
     6901 ggtgggattt ttggctgggt tgggaatagc gatgcggtga tcgcagcgct gaaacaataa
     6961 cacaccggaa caaggaagag cgggatgagt gcaaccatgc tgagcagacc caaattctgg
     7021 gtcccgggcg actggaacgc attgtttggt ttcggaacca acatcctggt caatgtgctg
     7081 gtgctgaccg gcctgttgcg attcgtgctg cagatgccgg atgcactggt gtttggccgc
     7141 attctgccgg cactcggtct gatgttgttt ctgagcaccg gatattacgc gttcctggca
     7201 tggaaactgg cgaaggacac cgggcgcacc gacgtgtgtg cgctgccctc cggcatcagc
     7261 gtgccgcaca tgtttgtcgt gacattcgtc gtgatgctgc cgatcatgat tgcgaccaag
     7321 gatccgattc aggcatggga agccggcctg acctgggtgt tcgtgcaaag tttcgtgctc
     7381 atggcgggtg gtttcatcgg accgtacatc cgcaagatta ccccacgggc tgcactgctc
     7441 ggttcgctgg ccggcatctc gatcacgttc atctccatga gcccggcggc gcaggtattt
     7501 acgacgccgg tgatcggtgt ggtctgtttc gcggtgatcc tcgccaattg gttcggcggg
     7561 gtaaaatatt tcggcggcgt gccgggcggc ctggtggcga tcttcgtggg aaccgtgatc
     7621 gcctggggtt ccaacttgtt cgggttggga tttggcgacc tgacgttggc caaactcacc
     7681 ggctcgttct ccaacttcgg cttttcgtac ccgattccgg ctttcatgta cacgttcggc
     7741 gggttcaaat atctcggtgt catcctggtc accgcgatcc cgttcggcat ctacgacctg
     7801 atcgaggcat tggataacgt cgagagtgcg tcggccgcgg gtgactcgtt ccccaccacg
     7861 cgcgtgctga ccgccgacgg agtgatcagc ctgattggtt gccttttggg caatccgttc
     7921 atcaacgcgg tctatatcgg ccatcccgga tggaaagcga tgggcggccg tatcggctat
     7981 tccgcggtga ccggtatcat tgtcctcgtg ttgacgtggt ttggcatcat tgcggtgatg
     8041 atggcgctga ttccggtcgt cgcaatcctt ccgatcctgc tttacattgg catgctgatc
     8101 ggttcgcagg cgttccagga atcgccgcac cgccatgcgc cggcgatcgt tttggcgttg
     8161 ctgccgcaga tcgctgcctg gggccatacg cagatcaata acgcgctcgg cgcagccgga
     8221 acgaacgcgg tcacggtggg ttatgccaaa ctcgcgcagg ttggggtgct gtatcaggga
     8281 ctgcaaacct tgggcggcgg tgccaccctg gccggcatta tcctgggtgc catcacggtt
     8341 ttcatcattg accgagagtt cgataaggcc gcgggatttg ccttcgcggg agcgatcttc
     8401 acatttttcg gctttatcca tggcgaggcg atccaggttg gatcatcgat aacggtcgcc
     8461 gtcggctatc ttggcgtggc ggggatcctg ttcttcctgt cgaaatatgc cgaattccac
     8521 ccgcttccgg tggatgtgca tggcgctcag gaagcggatt gaaacacgga cggaaccggc
     8581 acggtcggaa cgagaccgtg ccggttcagc atttatttca gccgccggag cttccgcctg
     8641 agtacgaata gctcggcatt gccatcagcg cggttttgct gccatccccc atcatcatca
     8701 gtttgctgct ggtgaattgc acgtggctca gcggtattat gatcagcttt gcgccgatgc
     8761 ccaggaaacc gccgacggaa acgaccgcag tgtctgcgcc accttttgcc ggcatcagga
     8821 tgtcatcaat cacaccaatc ttgtcgccat ggtcgttata aacgggcaat ccgatcagct
     8881 tgctggagcg catattgtga tcggtagtca tgtaggccgc atatgacggc gactccgatt
     8941 gcgccatcgc gggtgccgcg gcgctgaacg ccaccatcac gacagcgaga accatggtgt
     9001 aacttctcat cgcactctcc attcttgttg gagacgccgg gcttttcggc acggtcacct
     9061 cgggcaccgg atgtggtgcc tgccaggtcg gaccgggcaa gggctcgaat gttacgagtg
     9121 cgttggtgac aattgggtaa tgtgtcagct cccgcgatac gtcgaatacc cgtacgggga
     9181 aagcagtagc ggaatatggc aatgggcaga cggatcggtg atgcgaaagc gaatggggat
     9241 caggtcatag aagccggcat cgcccgcccc cgctttatcc cgccaggctc cgacgttgaa
     9301 aacaatctca tagacacctg gcaagagcgt ggtttccgcg aggagtgggg catcgcatcg
     9361 tccatcggcg ttggtatgcc acgcgccgag ctgcgtgcga acaacgtttc cgatacgaaa
     9421 cagggacagc ggcaacccaa ccgccggttg acccaacgcc atgtcgagcg cgtgcaccgt
     9481 gaggcgcccg gtctcagctt ccattgtgtg ccggcatgac caggtcatcc aatcggaagc
     9541 gtgcgatttt cgccacttca gccaaagcgg tcgcgcgttc ctggtctggc gcgtgctgca
     9601 ggcgtgcgga caatgacgcc aggatcgctg cgcggtcacg ctggccgcgg accgcgatga
     9661 tgaacggaaa accaaaccgc gatcggtatt ccgcattgag tcgactgaac gaagctgcct
     9721 cgtcggccgc cagccggtcc agacccatgc taccctgttc cgccgacgac gacgccgtca
     9781 gtggtccggt ctgcgccagt tcgggatgcg cctgcaacaa cgcaagttgg cgttccatcc
     9841 cggaatttgt tactaccgaa accatggtcg catgcagtgc cggtaccgaa gcgaacggct
     9901 gcgcagtcca ggcggcacgc gcaacccagg acgaatgctc gaagatacca ccaagcagtg
     9961 cggtgaaccc atcgacaccc aaggtgttga ttgtggcgag atcaatggtc gggccggcgg
    10021 tcaattcgtc ctcgatcccg cggcgatcca tgatccgagc gcggcccgct cggcctcggt
    10081 gatctccgta atattattca acggcatcgt gtgggtcttc accgcctggg cataaatctg
    10141 cttcgagtat tgcagaattt gcgcaggcgt atcgaacatc acacccttgg gaggctcgga
    10201 aaacgcgggg aacttcgggt gcgcggaatg acagatatgg cagcgctgat ccacgataat
    10261 gcgcacttcg gtaaagctga tcggcttttc ggcagtgttc gtcgccggac tataactgtc
    10321 aaccagcgtc agcagcgccg ccagtgcgac gggaaccgct gcagctggcc acagccgcca
    10381 gtccggcgcg gcaccggtgt gcatcgtatt gaaatagtgc cgcaccagga agctggccac
    10441 gaagatgcac gacagaatca gccagttcca cttcgtctga taagtgaacg aatagtggtt
    10501 gctgagcatg acgaacacga ccggcaacgt cagataattg ttgtggatcg agcgctgttt
    10561 cgcctgatag ccccagattg ccgccggctc gcgtccggca atcaaagcat cgatggtctt
    10621 gcgctggttc gggatgatga ggaacagcac attgccaacc atgatcgagc caaccagcgc
    10681 accaacctgc aaaaatgcgc cgcgcccgct gaacacatga cagaatccgt aggtcaccag
    10741 aaccagaagt gaaaatccac aggttgccag acgagccgtg ctttgcccga tccaggagcg
    10801 gcatagctga tcataaccga tccaacccag taccaacgaa gcgagcgcca aaggtaccgc
    10861 gtccaatggt tcgatgcgtg acaccgaggc gtccagcaga tacactgacg gattggcgta
    10921 ataggtcgtt accagcaagg caaatccgaa aatccaggtg gaatatgctt cccacttgaa
    10981 ccaggccaga tgctccggca gaaattccgg tgcgacaaca tatttctgga tctgatagaa
    11041 cccgccgccg tgcacctgcc agctctcgcc actgacccgc ggatcgagtc tgggattcgg
    11101 acggagactg gcatccaacg cgatgaaata gaaagatgag ccaatccagg cgatcgccgc
    11161 gacgacatga gtccagcgca gcaacagact gacccagtcg agcaacacgc cccagtcgag
    11221 cgattggtaa atctccatgc cgctgtgcct ggcctgcgat ggttaacgta tcaagcccag
    11281 gtccaccata cggacggatc tgggcctggt caacgaactc gttacgctca cgctgatgat
    11341 cagaagtgca cttcgatacc cagctccggt gcaacctcct cggcgcccgg caacgaatcg
    11401 gagttgccga atttgtgttc ccacaattcg accgcgaaat acaggtcagg cttgtgcggc
    11461 ttgttgaaca gcatcgcacc gacatccaga ctcaaggtcg ggcgagcgag tatttcgaca
    11521 taggtgttgc cgccaaagcc cgtcttgccc ttcggcatca cgatattcat gaacccctta
    11581 aagtccagcg gaatgccgat cagtcccttc agactataga accaaacgaa ttcaa
//
LOCUS       DATAVD010000730         4560 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2861780, whole genome shotgun sequence.
ACCESSION   DATAVD010000730 DATAVD010000000
VERSION     DATAVD010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4560
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2861780"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..360)
                     /locus_tag="VHX39_13850"
     CDS             complement(<1..360)
                     /locus_tag="VHX39_13850"
                     /inference="COORDINATES: protein motif:HMM:NF012354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3992250.1"
                     /translation="MDTIETLRTFVRVVETGSLSAVAREMNASQSTVSRQITSLEEHF
                     GVRLFHRTTRHLSLTDDGENLHEHARSVLDMIEGMETALGQDKSSPSGHVRVATPVSL
                     GLILMERVPELMTRYPSL"
     gene            784..1860
                     /gene="dinB"
                     /locus_tag="VHX39_13855"
     CDS             784..1860
                     /gene="dinB"
                     /locus_tag="VHX39_13855"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003622147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEX3992251.1"
                     /translation="MSDIRRIIHIDMDAFYASVEQRDDPALRGLPVAVGGARERGVVA
                     AASYEARKFGVHSAMASITARRKCPELVFVPPRFDVYRAVSKQIHAIFARYTPLIQPL
                     SLDEAHLDVTEPLIDLGSATAIAREIKRLIREETGLTGSAGVSYNKFLAKLASDYRKP
                     DGLFVITPRMGPDFVAALSVGKFHGVGPATAAKMNSLGIHTGADLRQQTREFLTLRFG
                     KAGDYYYAAARGEDHRPVVSDRQRKSLGAETTFARDLLAWHEVPPALTPLIARIFTAS
                     EASGLVARTVTVKVKYADFQQITRARSVADGVTGQAMLQDLAFELLQPLFPPALGVRL
                     LGITLSNFTDPTTQVQQQLALTLV"
     gene            complement(1868..2617)
                     /gene="mtgA"
                     /locus_tag="VHX39_13860"
     CDS             complement(1868..2617)
                     /gene="mtgA"
                     /locus_tag="VHX39_13860"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HEX3992252.1"
                     /translation="MNPRGVLDRVFRVTDLASNARKSKPTMGWVGRLLMRIGAGLLFG
                     PLVLILLYRFIPVPLTPLMVIRMIQGEPLHHRWVPYRDISPALPHALIASEDNLFCEE
                     KFGFDVAAMRSQVTAWEDGKRPHGASTITMQTAKNLFLWPDRSTIRKGIEAYLTVQIA
                     LLWPKRRILEVYLNSVEFGPGIYGVEEASRRFFHKTAADLTTYDAALLISVLPRPLVY
                     IASPPGPYVRNRAGEIERVTEELGPLLDCAQ"
     gene            complement(2667..4079)
                     /locus_tag="VHX39_13865"
     CDS             complement(2667..4079)
                     /locus_tag="VHX39_13865"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3992253.1"
                     /translation="MPNNALRSILPAAGIPADRAASVDIAGGTDPILPTPFRIGVAGS
                     ATLAATGLAAADLWELRTGRRQSVAVDVRHATASLRSGHYMKLGDGEVSTRRNSIMGV
                     YPTKDGRWSYVHANFPNHRAAALGVLGVPEDRDAVAKAVLTWNAADLEEAIIAAKGAG
                     GMVRTHAEWAKHPQAAAIAALPLLEIVKIGEAPPEPLPPGSRPMSGIRVLDLTRVLAG
                     PTCARTLAEHGADVMKITGAHLPNLGYQEFDTGHGKLNAQLDLREQADVDRLRGLVKE
                     ADVFSQGYRPGTLGNRGLSPEELAAIRPGLVYVSLCAFSHAGPWASRRGFDTVVQTVS
                     GITSRQAEVVPGKTPGPQFYPVSAIDYCTGYLMAFGAMVALKRRATEGGSWLVRTSLA
                     QIGKWIVDLGEVPEAAARDASAEFTPAELEKWSMVTDTPSGKLRHLKPVVQMSETPTY
                     WARPSVPLGYHQPVWPARGA"
     gene            complement(4176..>4560)
                     /locus_tag="VHX39_13870"
     CDS             complement(4176..>4560)
                     /locus_tag="VHX39_13870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992254.1"
                     /translation="DIAGHVAGTLGSVSFGRIRVGREHQPHMKPHDLLKFLWPGLVKV
                     MQLPPPGSVKEPPLDPIHWPIIAGIVAAAFITKSKDTLDPRIAFTILMEAGVIASKFD
                     PATIDPGKWRLETHNGSLLVFRANA"
BASE COUNT          838 a         1366 c         1476 g          880 t
ORIGIN      
        1 caggctgggg taccgcgtca tcagttccgg aacgcgctcc atcaggatca acccgaggga
       61 aaccggtgtt gccacgcgga catggccgga gggcgacgat ttgtcctggc ccagagccgt
      121 ctccataccc tcgatcatgt cgagaacgga cctggcatgc tcgtgcaggt tctccccatc
      181 gtcggtcagg ctgagatggc gcgtggtacg gtgaaacagc ctgacgccaa agtgctcttc
      241 gagtgaggtg atttgccggc tgaccgtcga ctggctggcg ttcatctctc ttgccaccgc
      301 cgacaaggag ccggtttcaa cgacccggac aaaggttcgt aaggtttcaa tggtatccat
      361 ctatggatgt ctccgcgttt ttttcggcac agatttccct gcgctatcag cgcaagacat
      421 taaaatttat gtttttttgt cagtatggcc tcgatcgaga tcgcccgatc aatcagggtc
      481 tgttctctgg acattcctcg ccagcctaac cagttggaga ctgacgcgcg caaaacaagg
      541 cctcccagcc aagtgcagcg cagcatttcc tttaagagga ccaggccggc acgataaggc
      601 gttgttccgc atgccgggaa tgcgttctcg tcattggtcg gtagctcgga cttcctctcc
      661 cagacgtgcg agaatattcc caggttgcat gcattgggcg ccgacgttac tgaatgataa
      721 tgcagcaaca ggcgactcgc tgtcgtctac cgtttccgcc acatgcagtc cggatccgcc
      781 caggtgtccg atattcgccg catcattcac atcgatatgg acgcgtttta tgcgtcggtg
      841 gaacagcgcg atgaccctgc gttgcgcggc ttgccggtcg ccgtgggcgg tgcacgcgag
      901 cgcggcgtcg tcgccgcggc cagttatgaa gcccggaaat tcggcgtcca ctcggcgatg
      961 gcgtcgatca ccgcgaggcg gaaatgcccc gaactggtct tcgtcccacc ccggttcgac
     1021 gtttaccggg ccgtatcgaa acaaatccac gcgatctttg cgcgctacac acccctgatt
     1081 cagccgctgt cactggatga agcgcacctc gacgtcaccg aacccctcat cgacctgggc
     1141 tcggccactg ccatcgcgcg cgaaatcaaa cggttgatcc gtgaggaaac cggcctgacc
     1201 gggtccgccg gggtgtcgta caacaagttt cttgcgaaac tggcgtccga ttatcgcaag
     1261 ccggatgggt tgtttgtcat cactccacgg atgggaccag acttcgtggc agctctgtcg
     1321 gtcggcaaat tccacggagt cggtccggca acggcagcaa aaatgaattc tctgggcatt
     1381 cacaccggag cagatttgcg ccagcaaacc cgggaatttc tgacgttacg cttcggtaag
     1441 gcgggcgatt attattacgc ggctgcgcgg ggcgaggatc acagaccggt ggtttccgac
     1501 cggcagcgca agtcgctcgg cgcagaaacg acattcgcgc gcgatctgct ggcgtggcac
     1561 gaggttccac ccgcactcac accattgatc gcgagaattt tcacggcgtc cgaagcgtcc
     1621 ggtctggtag cccgcacggt cacggtgaag gtcaaatatg ccgactttca acagatcacg
     1681 cgggcacgct cggttgccga tggcgtgacc gggcaggcga tgttgcaaga ccttgccttc
     1741 gagttgctgc agccgctgtt tccgccggct ttgggtgtgc gtctgctggg gatcacgcta
     1801 tcgaatttta ccgacccgac aactcaggtg cagcagcaac tggcactgac tttggtttag
     1861 tggcgtatca ttgcgcacag tccagcagtg gcccgagttc ctcggtcacc cgctcgatct
     1921 cgccggcgcg gttgcgcacg tagggacccg gcggcgaggc gatgtaaacc aacggccgtg
     1981 gcaatacgct tatgaggagc gccgcgtcgt acgtcgtcag gtcagccgca gttttatgaa
     2041 agaaccgtcg cgaggcttct tccacgccat aaattcctgg gccgaactcg acactgttca
     2101 ggtagacctc caggatgcgc cgcttcggcc agagcaaggc gatttgcacc gtcagatagg
     2161 cctcgatgcc cttgcggatg gtgctgcggt ccggccacag gaacaaattc ttggcggtct
     2221 gcattgtgat ggtgctggcg ccatgcggcc gcttgccgtc ctcccacgcc gtcacctgac
     2281 tgcgcatggc agccacgtcg aagccgaatt tctcttcgca gaacaggttg tcttcggaag
     2341 caatgagggc gtgaggtaat gcaggcgaaa tgtcgcgata cgggacccat cgatggtgta
     2401 gcggctcgcc ctgaatcatc cggatcacca tcagcggcgt gagcggcacc gggataaaac
     2461 gatacaacaa aatcagtacc agcgggccga acagcagccc ggcgccgatg cgcatcagca
     2521 ggcggccaac ccatcccatg gtgggcttcg atttcctcgc attggacgcc aggtcggtta
     2581 cccggaacac ccgatccaga acaccccgag gattcacggc gcctcgatcg ggaagtccgg
     2641 gcggccgaag gctcgcactc ggtgacctag gcgccgcgtg ccggccagac cggctggtga
     2701 tagcccagag gaaccgatgg cctggcccag tacgtgggcg tctccgacat ttggacgacg
     2761 ggcttgaggt ggcgcagctt gccggacggt gtgtcggtga ccatcgacca tttttccagt
     2821 tcggccgggg tgaactcggc ggatgcatcg cgggccgcgg cttccgggac ctcacccagg
     2881 tcgacgatcc acttgccgat ttgcgccaac gaggtgcgca ccagccaact gccgccttcc
     2941 gttgcccgcc gcttgagcgc gaccatggcg ccaaacgcca tcaggtagcc ggtgcaataa
     3001 tcgatcgcgg agaccgggta gaattgcggg ccgggggttt tgccgggaac gacctcggcc
     3061 tggcgggaag tgatgccgct gaccgtttgc accacggtgt cgaagccgcg ccgtgaagcc
     3121 cagggaccgg cgtggctgaa ggcgcagagg gaaacgtaga cgaggccggg tcggatggcg
     3181 gccagttcct cgggcgacag gccgcgattg cccaaggttc cgggccggta accctgggag
     3241 aacacgtcgg cctccttaac cagcccacgc agccggtcga cgtccgcctg ttcgcgcagg
     3301 tcgagttgcg cattcagctt gccatgaccg gtgtcgaatt cctggtagcc gagattgggc
     3361 aaatgagcgc cggtgatttt catgacgtcg gcgccatgct cggccagggt gcgggcgcag
     3421 gtgggaccgg cgagcacgcg ggtcaggtca agcacgcgaa tgccggacat cgggcgggag
     3481 ccggggggca ggggctccgg cggcgcctcg ccaatcttga cgatttccag cagcggcaga
     3541 gcggcgatgg cggcggcctg cggatgtttc gcccactcgg cgtgggtgcg gaccatgccg
     3601 ccagcgcctt tggcggcgat gatcgcttct tccaggtcgg cggcgttcca ggtcaggacg
     3661 gctttggcga ctgcatcgcg gtcctccggg acaccaagca cacccaaagc ggcggcgcga
     3721 tggttgggga agttggcatg gacataactc cagcggccgt ctttggtggg gtagacgccc
     3781 atgatcgaat tgcgccgggt ggagacctcg ccgtcgccaa gcttcatgta gtggccactg
     3841 cgtaacgagg cggtcgcgtg gcggacgtcg accgcgacgg attggcggcg gccggtgcgc
     3901 agttcccaaa gatcggcggc agcgaggccg gtggcggcca gggttgcgct gccggccacg
     3961 ccgatgcgga acggggtcgg caggatcggg tcggtgccgc cggcgatgtc cacagaggct
     4021 gcccggtcgg ccgggattcc ggcggcgggc agaatcgagc gcagagcgtt gtttggcatg
     4081 ggcggaacct cccggtttgc ttgggtgtag gagtttgccc ggattttggt ttgggggaaa
     4141 tgattcgatt ggtgccggtc cgccgcaccc cgcgatcacg cgttggcgcg gaacaccagc
     4201 agagagccgt tgtgggtttc cagccgccac ttgccgggat ctatggttgc agggtcgaat
     4261 tttgacgcga tcacgcccgc ctccatcagg atcgtaaagg caatcctggg gtcgagcgta
     4321 tctttcgact ttgtaatgaa tgcggccgcg acaatgcctg cgatgatggg ccagtggatt
     4381 ggatcgaggg gcggctcctt aacggagccg ggtggcggca gttgcatgac cttaaccaga
     4441 cctggccaca ggaacttcag caggtcgtgc ggtttcatgt gaggctgatg ctccctgcca
     4501 acccgaatgc ggccaaagct cacgctgccc aaggtcccgg cgacatggcc tgcgatatcc
//
LOCUS       DATAVD010000731         2260 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_628126, whole genome shotgun sequence.
ACCESSION   DATAVD010000731 DATAVD010000000
VERSION     DATAVD010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2260
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_628126"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..755)
                     /locus_tag="VHX39_13875"
     CDS             complement(<1..755)
                     /locus_tag="VHX39_13875"
                     /inference="COORDINATES: protein motif:HMM:NF014542.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX3992255.1"
                     /translation="MRSDRLNSVPVTVITGFLGSGKTTVLNRLLQNPELADTAVIINE
                     FGEVSLDHLLIEQAIENAVLLKNGCICCTVRGDILDTLEELFRKRETGELPWFRRIAI
                     ETTGLADPAPVVQTLIGTSRPCHLDGIVVTADAIHVPRQLHEQEEARHQIAFADRILL
                     TKSDLVTPAEVATAERAIQDFNAQAPIWRVVNGDVTPDQVFGLAPEERPRNWLGPATE
                     AHHDHDHDHSGIASTVLRAEAPISGPALALWFDS"
     gene            811..2016
                     /locus_tag="VHX39_13880"
     CDS             811..2016
                     /locus_tag="VHX39_13880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992256.1"
                     /translation="MAAESHNMRLISRDKLAGFGNVGEGMSMQLTGSGRRILWLAHES
                     APKNFTGVDVTDPAKPRVICQTELPHRNVRSNSLEVCGDVMAVAYQTSTHGLQPAGIE
                     LFDISNPEAPRVIGFFDCSGPSSRGVHQLWFIDGKTVYFSGGAPDFTPRNLLDDQPFR
                     AIDVSDPTKPREICRWWYPGVAEGDTAPPPPRHPKFDSGWRAHNTNVYPERPDRAYLG
                     YLDGGAIILDIGDLSAPKMVGHWNPHPPFPGFTHTAMPLFDRNLLICSDECVRDGGAD
                     WPKLVWVLDARLESNLVCVSTFPLPPVEEHQFRGGRYGAHNMHENRPGPAFRSDTLVF
                     GTYFNGGMRVHDITNPFQPQEVAYYVPEGPSAERPAVQINDVYVDENRLIYTVDRFVG
                     GLYVMEMTV"
     gene            complement(1997..>2260)
                     /locus_tag="VHX39_13885"
     CDS             complement(1997..>2260)
                     /locus_tag="VHX39_13885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992257.1"
                     /translation="YQAQDWCWSALRPLPRAWWQQDGAWMRADLAFWDGNAVVAMQPK
                     DLETGALPVPFQRFWIGETLPVSPFRREFPTGPDVVSLTPSSP"
BASE COUNT          443 a          723 c          661 g          433 t
ORIGIN      
        1 gaatcaaacc atagagccaa tgccggcccg gaaatcggcg cctcggcacg cagcacggtc
       61 gaggcgatac cggaatggtc gtgatcatga tcgtgatgcg cctcggttgc ggggcccagc
      121 cagttccgcg ggcgctcctc cggggccaga ccgaacacct gatccggcgt cacatcgcca
      181 ttgaccaccc gccaaatcgg tgcctgggcg ttgaaatctt gaatggcgcg ctcggccgtt
      241 gccacctccg ccggcgtaac gaggtcgctt ttggtcaaca gaatgcggtc ggcaaacgcg
      301 atctgatggc gtgcctcctc ctgctcatgc agttgccttg gcacatggat cgcatcggcc
      361 gttacgacga tgccgtcgag atggcagggc ctggaggtgc cgattaaggt ttgcacgacc
      421 ggcgcaggat cggcgagccc ggttgtctcg atcgcaatcc ggcggaacca tggcagttcg
      481 ccggtctccc gcttgcggaa cagttcttcc agtgtgtcca aaatgtcgcc gcgcacggtg
      541 cagcaaatac agccgttctt aagcagtacg gcattctcga tcgcctgctc gatcagcagg
      601 tgatccagac tgacttcacc gaattcattg atgatcaccg ccgtgtcggc aagctccggg
      661 ttctgaagga gccggttcaa caccgtcgtc ttgccgctgc caagaaaacc ggtaatcacg
      721 gtcaccggca ccgaattcag gcggtcactt cgcatcggcc gcaaaatcct tcacagtcct
      781 cagcaacagc aggcgggagg caagatcgtc atggcagcag aatctcataa tatgcggttg
      841 atctcccgcg acaagctcgc cggcttcggc aatgtcggcg aggggatgag catgcagctc
      901 accggctccg gacgccgcat cctgtggttg gcgcatgaat cggctccgaa gaatttcacc
      961 ggcgtcgatg ttaccgatcc ggcgaagcca cgcgtcatct gccagaccga gttgccgcac
     1021 cgcaatgtgc gttccaactc gctggaggtt tgcggcgacg tgatggcggt cgcctatcag
     1081 accagcacgc acggattaca gccagccggg atcgagctgt tcgacatttc caacccggag
     1141 gcgccgcgcg tcatcggctt cttcgactgc tccggcccaa gttcgcgcgg tgtgcaccag
     1201 ttatggttta tcgacggtaa gacggtgtat ttctccggcg gagcgcccga cttcacgccg
     1261 cgcaatctgc tggacgacca gccgttccgt gccatcgatg tgtccgaccc gaccaaaccg
     1321 cgggagattt gccgctggtg gtacccgggg gttgccgaag gcgacacagc acctcccccg
     1381 ccgcggcacc cgaaattcga cagcggctgg cgtgcgcaca acaccaatgt ctatccggaa
     1441 cgtccggatc gcgcctatct gggttacctc gacggtggcg ccattattct cgacattggc
     1501 gacctctcgg caccaaagat ggtggggcac tggaacccgc atccgccgtt ccccggcttc
     1561 acccataccg ccatgccgtt gttcgaccgc aaccttctga tttgcagcga cgaatgcgtg
     1621 cgcgacggag gtgcggactg gcccaaactc gtgtgggtgc tggatgcgcg acttgagagc
     1681 aatctcgtct gcgtctcgac atttccatta ccaccggtcg aggaacacca attccgcggc
     1741 ggccgttatg gcgcccacaa tatgcacgaa aaccgtcctg ggcctgcgtt ccgctctgac
     1801 acgttggtgt ttggcaccta tttcaatggc gggatgcgcg tacacgacat caccaatcca
     1861 ttccagccgc aggaagtcgc gtattacgtg cccgaggggc cctccgccga gcggccggca
     1921 gttcagatca acgatgtcta tgtcgacgaa aatcgattga tttacacagt cgatcgtttc
     1981 gttggcgggc tttacgtcat ggagatgacg gtgtgagcga aacaacgtcc ggtccggttg
     2041 gaaattcgcg ccgaaacgga ctgaccggca acgtctcccc gatccaaaag cgctgaaatg
     2101 ggaccggcag tgcgccggtc tcgagatcct taggctgcat cgcgaccacc gcgttaccat
     2161 cccagaacgc cagatccgcc cgcatccagg cgccgtcctg ctgccaccag gcgcgcggca
     2221 gcggacgcaa cgccgaccag caccaatcct gcgcctgata
//
LOCUS       DATAVD010000732         5420 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2115814, whole genome shotgun sequence.
ACCESSION   DATAVD010000732 DATAVD010000000
VERSION     DATAVD010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5420
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2115814"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1511)
                     /locus_tag="VHX39_13890"
     CDS             complement(<1..1511)
                     /locus_tag="VHX39_13890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3992258.1"
                     /translation="MRFTVKMKLGLTFGTVIVLSAITAWLGIANLGSLDATMESVLGG
                     PVERIQLAQDLNNVLLSAIRAEKSLILAGANLEDRARQEAELLKTREVFSGEIDKLDT
                     LATPEGKKLIVALRGTRQEWLEASDRIRALVHDNKFDEAAALSSGRARELVAVREKQV
                     RDYIDLEQKLLAQARESVARQYDSTRLLLIVVTLLAMAVGTGAACWIAFAISRGLARS
                     TTLANAVAKGDLSQHLEMTSHDEIRDMVDALNSMTENLQITASVADRIAGGDLTAETK
                     RLSDKDTLGIALERMLEKLRTVVTEASTAADNVLSGSQQLSSGSTELSEGATEQASAA
                     EQASASMQEMAANIKQNADNAAQTEKIARKSAVDAQKSGEAVGRAVHAMQTIAEKIII
                     VQEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQTAATEISTVSSQTV
                     KAAQEASEMLGQLVPDIIRTAELVTEISAACREQDVGTDQINQAIQQLDKVTQ"
     gene            complement(1545..2051)
                     /locus_tag="VHX39_13895"
     CDS             complement(1545..2051)
                     /locus_tag="VHX39_13895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HEX3992259.1"
                     /translation="MTKWNGNRPLEVLTLELEGEMFAVEALHVREILDLVPITDVPRA
                     PAFVNGLINVRGKVVPLADLRVRFGMEQKPPTIDTRIVVLELELDGEPVIAGIRADKV
                     HEVAEVAAAALQEAPKVGMRWRPEFICCIGKRGDDFMVVLDIARVFAAAPRDEKDQDG
                     PVQEQQVA"
     gene            complement(2060..4096)
                     /locus_tag="VHX39_13900"
     CDS             complement(2060..4096)
                     /locus_tag="VHX39_13900"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HEX3992260.1"
                     /translation="MNASDPEQVFLQEAQDLLEQLEQSLLDLERTPGNGELIDKAFRA
                     LHTIKGSGAMFGFDAVAAFTHQFETALDLVRKGQVTPPRELIAVALAAKDQMRALIDQ
                     PALASAIASELILGDLQRVMATAAGSLREPAAEATDNSETPADGAATWCIRFRLPADA
                     MVTGTNPLLLLDELRTLGTASVCALTDGVPPLEEIDPSLSYLRWTVTLRTDQPRSAIE
                     QVFLFVIDEMELAIEPVADIPSLPAQVTADPPPVGGSSENHPSAAAAAPQPARATAMP
                     QHPGTETHELRTAETIRVPAERLDELMDRVGQLVIAQSRLKEIAAASNDAAMKSVTED
                     IERLSLELRDTTMGVRMLPIGQLFSRFRRLIHDLARDHGKRIELVTSGEETEVDKTVI
                     ERLNDPLIHLIRNAVDHGIEDPESRAAAGKPPLGRITLAATHVAAGVIIAIADDGRGL
                     ERERIRARAEENGLWAPGAKPTDSELFQVIFQPGFSTAREVTSLSGRGVGMDVVKRTI
                     DGLRGSIDVASTAGQGSEITLRLPLTLAIIDGLLVRVGRGRYVIPLSAVEECVELSME
                     EDARSRGRNFLNIRGDLVPFLRLRELFNAATPADRYQKVVIVSAGELRVGLVVDQVIG
                     DHQTVIKALSKLHANIEIFSGATILGDGTVALILDIAHLVAQGQRHEERLQIAS"
     gene            complement(4096..4461)
                     /locus_tag="VHX39_13905"
     CDS             complement(4096..4461)
                     /locus_tag="VHX39_13905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3992261.1"
                     /translation="MKKRILAVDDSPSVRQMVKLTLSGAGYDIVEACDGADGLSKARA
                     STLDMVVTDLNMPVMNGLGLIRELRKLPAYRGVPILFLTTESDPEMKQQAKAAGATGW
                     ITKPFQQDQLVAVVKKVLG"
     gene            complement(4458..4826)
                     /locus_tag="VHX39_13910"
     CDS             complement(4458..4826)
                     /locus_tag="VHX39_13910"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEX3992262.1"
                     /translation="MPQDTTANVQLVLDGALTMRTIETIRATLNAAIEPPSGTALAEI
                     APAEIAPSGITIDCSAATEIDLTFIQLLVAARISARTAGLSINFAPCPDGVLLETLTR
                     GGFRVVPENGAGFWFTGEAQ"
     gene            5189..>5420
                     /locus_tag="VHX39_13915"
     CDS             5189..>5420
                     /locus_tag="VHX39_13915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase"
                     /protein_id="HEX3992263.1"
                     /translation="MDRIASITRTTTETDISLTLNLDGTGKADIATGIGFLDHMLTAL
                     TRHGLFDLTLRAKGDLHIDFHHTTEDVGIVLGQ"
BASE COUNT          952 a         1735 c         1659 g         1074 t
ORIGIN      
        1 tgctgggtga ctttgtcgag ttgctggatc gcctgattga tctggtcggt gccgacgtcc
       61 tgctcgcggc atgcggcact gatttcggtt accagttccg ccgtcctgat gatgtccggt
      121 accaattggc cgagcatctc gctcgcctct tgcgccgcct tgaccgtctg cgaggaaacc
      181 gtgctgattt ccgtcgcggc ggtctggctt cgctccgcca gcttgcgtac ttccgaggcc
      241 acgaccgcaa agcctttgcc gtgctcaccg gcccgcgctg cctcgaccgc ggcgtttaag
      301 gccagcaggt cggtttgtct tgcgatctcc tggacgataa tgattttctc ggcgatggtc
      361 tgcatcgcat gcaccgcgcg ccccaccgcc tcgccgcttt tttgcgcgtc gactgctgac
      421 tttcgggcga ttttttcggt ctgggccgcg ttgtcggcat tctgcttaat gttggctgcc
      481 atctcttgca tggaggcgga tgcctgttcg gctgccgagg cctgctcggt ggcgccttcc
      541 gataattcgg tcgagccaga ggacaattgc tggctgccgg acaatacatt gtccgcagca
      601 gtcgatgctt ctgtgaccac ggttcgcaac ttctcaagca tgcgttcaag cgcaatgcca
      661 agcgtgtcct tgtcggagag acgcttcgtt tcggcagtca gatcgccgcc agcgatccgg
      721 tcggcgacac tggccgtgat ttgcaaattc tccgtcatgc tgttgagcgc atcgaccatg
      781 tccctgatct cgtcatggct ggtcatttcc aggtgctggc tgagatcgcc tttggccaca
      841 gcgttcgcca gggtcgtgga ccgcgccagg ccacggctta tggcaaatgc gatccagcat
      901 gcggcaccgg taccgaccgc catcgcgagc agcgtaacga cgatcagtag cagacgagta
      961 ctgtcatact gtcgcgccac tgattcgcgg gcctgtgcca ggagcttctg ttccagatcg
     1021 atataatcgc gaacctgttt ctcgcgcact gccacaagct cccgggcacg accactcgac
     1081 agggcggccg cctcatcgaa cttgttgtcg tgcacgagcg cacggatccg gtcacttgcc
     1141 tcgagccact cctgccgcgt tccgcgcagt gcgacgatca gcttcttgcc ttccggagtg
     1201 gccagagtat cgagtttgtc gatctcgccg gaaaacacct cgcgagtctt gagtaactcg
     1261 gcttcctgac gggcccggtc ctcaagattg gcaccggcaa gaatcaaact cttctccgcc
     1321 cggatcgccg acagcagcac attgttcagg tcctgggcga gttgaatgcg ctcaaccggc
     1381 ccgccgagca cgctttccat cgttgcatcc agcgatccaa ggttggcgat cccgagccag
     1441 gcggtaatcg ccgacagcac gatcacggta ccgaacgtga ggccgagctt cattttgact
     1501 gtgaaacgca tcacccgcca ccccgcaaca acgacaagct tcgcctaagc gacctgttgt
     1561 tcctgaaccg gaccatcctg gtctttctcg tcacgcgggg ccgctgcgaa cacccgcgcg
     1621 atatccagca ccaccatgaa atcgtcgccg cgcttgccga tgcagcaaat gaattcgggc
     1681 cgccagcgca ttcccacctt cggtgcttcc tgcagcgccg cggcagccac ctcggccact
     1741 tcgtgcacct tgtcggcacg gatgccggca atcaccggtt cgccatccag ttccagttcc
     1801 agcacgacaa tgcgggtatc gatggtcggt ggcttctgct ccatgccgaa cctgacacgc
     1861 agatcggcga gcggcaccac cttgccgcgt acgttgatca acccgttaac gaaggccggt
     1921 gcgcgcggca cgtcagtgat cggcacgagg tcgagaatct cacgtacatg caacgcctcc
     1981 accgcgaaca tctcgccttc gagttcgagc gtcaggacct cgagcggccg gttgccgttc
     2041 catttcgtca tgctgtctcc taactcgcga tctgcagccg ctcttcgtgc cgctggccct
     2101 gtgcaacgag atgagcgatg tccagaatga gcgcgaccgt gccatcgcca aggatcgtcg
     2161 ctccggaaaa tatctcgata tttgcatgga gtttcgacag cgccttgatc actgtctggt
     2221 gatcgccgat cacctggtcg acgaccagtc cgacccgaag ttcgccggcc gacacaatca
     2281 ccactttctg atagcgatcg gccggcgtgg cagcgttgaa caattcgcgc agccgcagga
     2341 aaggcacgag gtcgccacgg atgttgagaa agttgcggcc gcgcgatcga gcgtcttcct
     2401 ccatgctgag ttcgacgcac tcctcgaccg ccgacagcgg aatgacgtaa cggccgcggc
     2461 cgacccgcac caacaatccg tcgatgatgg ccagggtcaa cggcaggcgc agcgtgatct
     2521 cggaaccctg gccggcggta ctggcgacat cgatgctgcc gcgcaggccg tcgatcgtgc
     2581 gtttcaccac gtccatgccg acgccgcggc cggacaggct ggtcacttcg cgcgcggtcg
     2641 agaagccggg ctggaaaatg acctggaaca gttcgctgtc agtcggcttg gcgcctggag
     2701 cccacagccc gttctcttcg gcacgggcgc ggatccgctc gcgctcgagg ccgcgcccat
     2761 cgtcggcaat ggcaatgatg acaccggcgg cgacatgcgt ggcggccaaa gtgatccgcc
     2821 ccaacggcgg cttgccggcg gcggcacggc tttcgggatc ctcgatgccg tgatcgaccg
     2881 cgttgcggat gagatgaatc agcggatcgt taagccgctc gatcaccgtc ttgtcgacct
     2941 cggtctcctc gccagacgtg acgagttcga tgcgcttgcc gtggtcgcgc gcaaggtcgt
     3001 ggatcaggcg ccggaagcga ctgaacaact ggccgatcgg cagcatgcga acgcccatcg
     3061 tggtgtcgcg cagttcgagc gaaagccgct cgatgtcctc ggtgaccgac ttcattgcgg
     3121 cgtcgttgct ggctgcggca atctccttca ggcgggattg cgcaatgacc agttggccga
     3181 cccggtccat gagttcatct aaccgctcgg ccggcacgcg aatggtctcg gcggttctca
     3241 attcatgtgt ttcagtgccg ggatgttgcg gcatggccgt cgcccgagcg ggctgaggtg
     3301 ctgcggccgc ggcactggga tggttttccg acgaaccgcc gacaggcggt ggatcggcgg
     3361 tgacctgggc cgggaggctg gggatatcgg cgaccggttc gatcgccagt tccatctcgt
     3421 caatgacgaa caggaacacc tgctcgatcg ccgaacgcgg ctgatctgtc cgcagtgtca
     3481 ctgtccaccg cagatagctc aggctcgggt cgatctcctc aagcggcggt accccatcgg
     3541 tcaaagcgca taccgatgcc gtgccaagcg tgcgcagttc atccaacagc agcagcgggt
     3601 tggtcccggt caccatggca tctgcgggga ggcggaaccg aatgcaccag gtggcagcgc
     3661 cgtcagccgg cgtctcggaa ttatcggtcg cttcggctgc cggttcccgc agtgatcccg
     3721 ccgccgtggc cataacgcgc tgcaggtcgc caaggataag ttcgctcgca atggcgctgg
     3781 ccagtgccgg ctgatcgatc agagcgcgca tctgatcttt ggcggcgagc gcgaccgcaa
     3841 tcagttcccg gggtggcgtc acctgacctt tgcggaccag atctaacgcc gtctcaaact
     3901 gatgcgtgaa ggcggcgacg gcatcgaatc cgaacatcgc gccggagcct ttgatcgtgt
     3961 gcaaggcgcg gaacgccttg tcgatcagct cgccattccc gggcgtgcgt tcgaggtcga
     4021 gcagcgactg ctcgagttgc tcgagcaggt cctgcgcctc ctgcaggaag acctgttccg
     4081 gatcgctggc attcattacc cgagtacttt cttgacgacg gcgacaagtt ggtcctgctg
     4141 gaatggcttg gtgatccagc cggtggcgcc agcggctttc gcctgctgtt tcatttcggg
     4201 atcggattcg gtggtgagaa acaggatcgg cacaccccgg taggcgggca gttttcggag
     4261 ctcacggatc aggccgagcc cgttcatcac tggcatgttc agatcggtga ccaccatgtc
     4321 cagcgtgctg gcgcgggcct tgctgaggcc atcagcgcca tcgcacgctt caacgatgtc
     4381 atagccggcg cccgacaagg tcagcttcac catctgccgc acactgggcg aatcatcgac
     4441 ggcgaggatc cgctttttca ttgcgcctct ccggtaaacc agaagccggc cccattttcc
     4501 ggcacgacgc ggaagccgcc gcgggtcagt gtttccagca acactccgtc cggacacggc
     4561 gcgaaattga tgctcagtcc ggcggtccgg gcgctgatcc gtgccgcaac gagcaactga
     4621 ataaaggtca ggtcgatttc ggtggcggcg gagcaatcga ttgtgatgcc agagggagca
     4681 atttcggcgg gggcaatctc ggcgagcgca gtgccggatg gcggttcgat cgcggcgttc
     4741 aatgtcgcgc ggatcgtctc gatcgtccgc atggtcaggg cgccatcgag aaccagttgg
     4801 acgttggctg tggtgtcttg cggcatcggt acgacccatg ttggccggtg atgcgttcag
     4861 ccgccggctg gcgcgtggaa cgagccggat accgggtgtg atccctggga gagtccggat
     4921 aacccgtggc gcctgactgc gacccgaacg ctcgatccgg ggtggaatgt ctttggtgcc
     4981 caagggtgac cgcaaatact gaagaaagcg ctaacggccc gggaatattg tgccagcgca
     5041 ccggggcatc gaagccgggg catggaggca ggcaagcgcc gcggtttcac cccgtacccc
     5101 caccagtggg caatgccatg gtcgaagccc ttgcacgtcc tcattgcccc gctggaccgc
     5161 gacgacccgg cggagtaatt gcacgaccat ggaccgcatc gcctcaatca cccgcaccac
     5221 gaccgagacc gacatttcgc tcaccctgaa cctggacggg acgggcaagg ccgacatcgc
     5281 caccggcatc ggtttccttg accacatgct gacggcgctg acccggcacg ggctgttcga
     5341 cctcacgctg cgcgccaagg gcgatttgca catcgacttc caccacacca ccgaggatgt
     5401 cggcatcgtc ctcggccagg
//
LOCUS       DATAVD010000733         3160 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_628204, whole genome shotgun sequence.
ACCESSION   DATAVD010000733 DATAVD010000000
VERSION     DATAVD010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3160
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_628204"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1680
                     /locus_tag="VHX39_13920"
     CDS             <1..1680
                     /locus_tag="VHX39_13920"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADOP family duplicated permease"
                     /protein_id="HEX3992264.1"
                     /translation="ATAIPLRQDIVDDVRTPLLILLGAVAFVLLIACANIANLVLAKT
                     LSRRKEVAIRAALGASRRRLLQQVLAETVLMSLIGGALGLIIAHYGMAFIVRFVGQQL
                     PRSADIGLDIRVLAFTLGVSLMTGLVAGILPALRLTREDVNEALKQSAGRTASDSGGN
                     RTRNALVVAEVAFSLMLLIGAGLLLRSLWALRAVSPGFDPGHVITMDLTVSTNQFTTP
                     RQLDSFYQNVLERVRALPGVKSAGLINRLPLTGGGAIQPVQIAGRPVVPMADQPEVDV
                     RITSPGYMRAMRIPLVSGRDFDDSDIAGRQAAVLISQSMARQFWPHEDPVGKQLTMYF
                     FPDSVRTVVGVVGDVKDEGLNQTRSASMLYMPAAQVTQPREYAWHAFGMTLAARTQTD
                     PASDVSAIANVVHQVDPDVALLNIKTMQDTVDDSLLQQRFTMLLLVGFAALAVLLAAV
                     GIYSVLAYMVRRRVREIGIRMALGAQIGDVLRLIVVEGMKPTLLGVILGLAGALALGR
                     IMASVIYGVSARDIPTFITVAAMMTFIGLLASAVPAYRATRVDPMRTLRDE"
     gene            1917..3146
                     /locus_tag="VHX39_13925"
     CDS             1917..3146
                     /locus_tag="VHX39_13925"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S53 family peptidase"
                     /protein_id="HEX3992265.1"
                     /translation="MNAFRRDIQIAMLTMVAIVLFAGAALCPASAQDRYESTFNGHRI
                     IYPASSIPWPGRQHTNYFFVDSDQLAAPQPPAGAETPGSVACVYQFVAGPTGCPIATS
                     TTVPNGGIGAIAIVDAGYYPTAQSDLDAFDTYFGIPATTITQVWPTPIRPPVYQDWEV
                     EEALDIEWAHAMAPQAKLFLVVSALCEIPACTTDPTWQAVQYAGRLVAANGGGVVSMS
                     FGDAEIPQETGFDQYFTQPGVVYFAAAGDSGLGVSGYPAASPNIVSVGGTYFNRDSNG
                     KFTYEQYYTGGGGGDLSPYEPRPSYQNGIAGIVGTHRGYPDISSDFCCAAIYLGGWGS
                     VGGTSWSSPTMAGIVNAAGSRRQSSLAQLTSMYSKLANPGAYHADFNDITTGDSRCKP
                     GWDLCTGLGSPKTYAGK"
BASE COUNT          575 a          947 c          949 g          689 t
ORIGIN      
        1 gcaacggcca tcccgcttcg tcaggatatc gttgacgatg tgcgtacccc tttgctgatt
       61 ctgctgggag ccgtagcctt tgtgctgctg atcgcctgtg ccaacatcgc aaacctggtt
      121 ctggcgaaga ctctctcgcg ccgcaaggaa gtcgcaatac gcgcggcgct gggggcaagc
      181 cggcgacggc tgttacagca ggtgctggcg gaaacggtgt tgatgtcgct tatcggtggt
      241 gccctgggat tgatcatcgc gcattacggc atggcattca tcgtcaggtt tgtcggccag
      301 caactgccac gttcggcgga tatcggtctc gatataagag tgctggcctt taccctgggc
      361 gtttcgctca tgaccgggtt ggtggcgggc attctgcccg cgctgcgcct gacgcgagag
      421 gatgtaaacg aagctctgaa gcagagcgcc ggtcgcaccg cttctgattc cggcggcaac
      481 cgcacccgca atgcgctggt tgtggctgag gttgccttct cgctgatgct gctgatcggc
      541 gcgggcctgt tgcttcgcag tctgtgggcg ctgcgcgcgg tgagtcccgg cttcgatccc
      601 ggccatgtga tcaccatgga cttgacggtg tccacgaacc agttcaccac gccgcggcaa
      661 ttggatagct tctaccaaaa tgtgctggag cgggtacggg cccttccggg tgtgaagagt
      721 gcaggcctga tcaaccggct gccgctcacc ggcggcggcg cgatacaacc tgtgcagatc
      781 gcaggccggc ctgtcgtgcc tatggccgac cagcccgagg tcgatgtgcg gatcaccagc
      841 cccggctata tgcgggcaat gcgaattccg ctggtgagcg gacgcgattt cgatgactcc
      901 gatatcgctg gccgccaggc tgcggtgctt atcagccagt ccatggcccg gcagttctgg
      961 ccacatgagg atccggtcgg caagcaactt accatgtatt tcttccccga cagcgtacgc
     1021 acggtcgtcg gggtggtcgg cgatgtgaaa gacgaggggc tgaaccagac tcggtctgcc
     1081 tccatgctct atatgcctgc agcgcaagtg acccagcctc gggagtacgc gtggcatgca
     1141 tttgggatga ctcttgctgc gcggacgcag accgatcctg caagtgacgt ttcggcaatc
     1201 gccaatgtcg tgcaccaggt cgaccctgac gtagcgctcc tcaacatcaa gaccatgcag
     1261 gacacggtag acgactcgct cctccagcag cgcttcacca tgctgttgct ggtgggcttt
     1321 gccgccctcg ctgtcctgct ggcggcggtg ggaatttata gcgtgctggc ctacatggtt
     1381 cggcggcggg tgcgcgaaat cggaattcgc atggcgctgg gagcgcagat cggcgacgtt
     1441 ctccggttga ttgtcgttga gggcatgaag ccgacgctgc tcggcgtcat tcttggtctg
     1501 gctggagcat tggcgctggg ccgcatcatg gccagcgtga tttatggggt gagcgccaga
     1561 gacatcccga ccttcatcac cgtcgctgca atgatgacct tcatcggcct gctggccagt
     1621 gccgtgccgg cgtatcgggc tacacgggtc gatccgatga ggacgctgcg ggacgagtag
     1681 tcacgttgac tgctttattg ttgctccggt cacagatcac cggtgcccct tcatccctgc
     1741 ttttggaatg agtgggggta caagtaccca ccaacctcga tcccacaaat tcaaacccgg
     1801 cgaatgtatc gggaacccgg cctggcttct gcagacacaa caactcgcat gggtttcgag
     1861 cttgcatttt ccaggaactc ccttgatgat tccgggtgtc acgcaggagc caatgaatga
     1921 atgctttccg cagagacatc cagattgcaa tgttaacgat ggttgcaatc gtcttgtttg
     1981 ccggtgcagc cctttgcccg gcatcggcac aggaccgtta cgagtcgact ttcaacggac
     2041 acaggattat ttatccggcc tccagcatcc cctggcccgg ccgccagcac acgaactact
     2101 tttttgttga ctcggatcaa ctggccgccc ctcaacctcc cgcgggtgct gaaactcctg
     2161 ggtcggtagc ctgcgtgtat cagtttgtgg ccggcccaac tgggtgtccg attgccacga
     2221 gcacaaccgt gcccaacggt ggtatcggcg ccattgccat cgtcgacgcc ggttattacc
     2281 cgaccgcgca gtctgacttg gacgccttcg acacctactt cggtattccg gctacgacca
     2341 ttacccaggt ctggcccacc ccgatccggc caccggttta ccaggactgg gaagtcgagg
     2401 aagccttgga catcgagtgg gctcacgcca tggcgccaca ggccaagctg ttcctggtcg
     2461 tatccgccct gtgtgaaatc cccgcctgca ccaccgatcc gacgtggcaa gcggtgcaat
     2521 acgccggacg tctagtggct gccaacggcg gtggcgtggt gagcatgagc tttggcgatg
     2581 cggagattcc tcaggaaacc ggcttcgatc aatacttcac tcagccggga gtcgtctact
     2641 ttgcagccgc cggcgattcg ggacttgggg tgagcggcta tccggcagcg tcaccgaata
     2701 ttgtgtcggt tggaggaact tattttaacc gcgacagtaa cggaaaattc acctatgagc
     2761 agtactacac cggcggtgga gggggagacc ttagtccata cgagccccgt cccagctatc
     2821 agaatggcat tgccggcatc gtaggaaccc atcgcggcta tcctgatatc tcttccgatt
     2881 tttgttgcgc tgccatttac ttgggaggct ggggttcggt tggaggtacc agttggtcat
     2941 ctcccaccat ggccggtatc gtgaacgcgg ccggaagccg gcgacagtcg tccctggcgc
     3001 agctcacctc gatgtacagc aagctcgcca atcccggcgc ttaccatgct gatttcaacg
     3061 acatcacgac cggtgattcg cgttgcaaac ctggttggga cttatgcacc ggcctcggct
     3121 ctcccaagac ttacgccggc aaataaccaa cgaggccccc
//
LOCUS       DATAVD010000734         2861 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3419926, whole genome shotgun sequence.
ACCESSION   DATAVD010000734 DATAVD010000000
VERSION     DATAVD010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2861
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3419926"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1014)
                     /locus_tag="VHX39_13930"
     CDS             complement(<1..1014)
                     /locus_tag="VHX39_13930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003620976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX3992266.1"
                     /translation="MPDTAVASFVTAQLLDAIRAVVGNRGLLTDRSDTEAASEDWRRL
                     YKGRTSAVVRPANTEEVAAVVRLCAEAGVPIVTQGGNTSMVGGAVPAEDGSELVLSTA
                     RLNRVRDLDPVDMTLTIEAGVTLKAAQLVAAERGCLLPLSISSEGTAQIGGVLAVNAG
                     GNNTVRYGNARDLVLGLEAVLPDGTIWNGLRRLRKDNTGYCLRQLFVGSEGTLGIITA
                     AVLKLVAQPKEIAVAFCAVQSAADALALFARFQAHDAASISAFELMSGLGTSFVFRHI
                     PNAVLPLSQPAPFYVLVELATPRPDAGLRSSLEQVMEGALSDGIVSDAVIAESDAQRA
                     AIWR"
     gene            complement(1194..1688)
                     /locus_tag="VHX39_13935"
     CDS             complement(1194..1688)
                     /locus_tag="VHX39_13935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992267.1"
                     /translation="MIHHLSIAARDPRQAAGVLAELMGGTAIPFPPNPGSYFALQLDE
                     HGSGIEVYPAGTVLQPGGETGGNFVHENARSFGSTHFALSVATDPTTVQAIAERAGWK
                     CFDCNRGPFHVIEVWVENETMVEVLPPAYAQEYLNFAQPGKMQAAMAAAAASGARHPR
                     AAAE"
     gene            1995..>2861
                     /locus_tag="VHX39_13940"
     CDS             1995..>2861
                     /locus_tag="VHX39_13940"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3992268.1"
                     /translation="MDGSAKPGTVGKGLAKSPGALAGLKVVDLTRVLGGPYCTMILSD
                     HGADVIKVEPPQGDEVRDWGPPFHEGDASYFIGVNRNKRAMAVDLRKPDGQAIILKLL
                     ANADILIENFKPGDMERWGLGYHDQLSTRFPRLIHCRISGFGGDGPLGGLPGYDAILQ
                     AMTGLMSVNGDASTGPLRLGTAIVDMGTGLYSAIGILMALHERTISGQGQYLDMTLYD
                     CGMALLHPQAANYFLNDKRPAGTGNPHPNLVPYDKYPTRTCDIFIASGNNGQFRKLCE
                     LVGRPALADDPRF"
BASE COUNT          542 a          922 c          889 g          508 t
ORIGIN      
        1 ccgccagatg gccgcacgtt gcgcgtccga ctccgcaatg acggcatcgc tcacgattcc
       61 atctgaaagg gcgccctcca tcacctgttc cagcgacgaa cgcagaccgg catccgggcg
      121 aggtgtggca agctcaacca gcacgtaaaa cggcgcgggt tgcgacaacg gcaacaccgc
      181 attcggaatg tgccggaaaa cgaacgaggt gccgaggcct gacatcaact cgaacgcgct
      241 gatcgaggcc gcatcatgcg cctggaacct cgcgaacagt gcgagcgcgt ccgccgcgga
      301 ttgcacggca caaaacgcca ctgcgatttc cttcggctgg gccaccaatt tcaatactgc
      361 agccgtaatg atccccagag tgccctcgga gccaacgaac aattgccgta gacaatagcc
      421 ggtattgtcc ttgcgcagcc ggcgcagtcc gttccagatc gtgccgtccg gcagcactgc
      481 ctccaggcca agcaccagat cgcgggcgtt gccatatcgg acggtattgt tgccgccggc
      541 gttcaccgcc agcacgccgc cgatttgtgc ggtgccttcc gaggaaatcg acagcggcag
      601 caagcacccc cgctcggccg ccacgagttg ggccgccttc aaggtgaccc cggcctcgat
      661 cgtcagggtc atatcgaccg ggtcgagatc gcgcacccgg ttcagccgcg ccgtgctcag
      721 caccagttcc gagccgtcct cggccggcac cgcgccacca accatcgagg tattgccgcc
      781 ctgcgttacg atcggcaccc cggcctcggc gcacagtcgc acgacggccg cgacctcttc
      841 ggtgttggcg ggtcgcacca ccgcgctcgt ccggcccttg taaagccggc gccagtcctc
      901 cgacgcggcc tccgtgtcgg agcggtcggt cagcaggccg cggttgccga ccaccgcgcg
      961 tatggcatcg agcaattgcg cggtgacaaa ggaggcaacg gcggtatcag gcatgacagg
     1021 tcctaccagg ggcattttcc ggcagcttaa cccagatcac acccggctga cacgaggcgc
     1081 tttgatcgga cagtgtaccg cgagccgcaa agaggtcgcc gaaacgacgt tccgtgatca
     1141 cactgacatg ccggaccggt gctacgccgt acgggcaccg gtccgtcggg aaattattcc
     1201 gcggccgccc tcggatgacg ggcgcccgaa gccgcggccg ccgccatagc cgcctgcatt
     1261 tttcccggtt gggcgaagtt gaggtattcc tgcgcatagg ctggcggcag aacttcgacc
     1321 atggtttcgt tctcgaccca gacctcgatc acgtggaacg gcccgcggtt gcagtcgaag
     1381 catttccatc cggcgcgctc ggcgatcgcc tgcacggtgg tcggatcggt tgcaacgctc
     1441 aatgcgaaat gcgtcgagcc gaagctgcgc gcgttctcgt ggacgaaatt gccgccagtc
     1501 tcgccgccag gctgcagcac ggttcccgcc ggataaacct caatcccaga gccgtgctcg
     1561 tcgagttgca gcgcaaagta gctgcctgga ttcggcggga acgggatggc ggttccaccc
     1621 atgagttcgg cgagcactcc cgcagcctgc ctcgggtcac gtgcggcgat cgaaagatga
     1681 tggatcatgg cttcctcaca gcattctgtt ccgcaggcat atcacaaacg ccgcaacggc
     1741 ttcaatcggg aggtggttgg ctcagcaggg cagggcgaac gcctttgcga tcgcaccgtt
     1801 ccatttgaac cctgaggacg cggaggaagc gggggacgct gagattggcg tcttgtcgtt
     1861 ggtcgaacag gaaccgattg ctgacgcgca aaaagaactc tgcgccctca gggagttcgc
     1921 gaacggtcgc gccgtgcctc tggccaaagc cctcgaccgg gcgctacacc gaattacaag
     1981 gaggaaccgt cgccatggat ggatcggcaa aacccggcac cgttggaaag gggctggcca
     2041 aatccccggg cgctttggcc gggttgaaag tcgtcgacct cacccgggtg cttggcgggc
     2101 cgtattgcac gatgatcctg tccgatcatg gtgccgacgt gatcaaggtc gagccgccgc
     2161 agggtgatga agtgcgcgac tggggcccgc cgttccacga aggcgacgcc agctatttca
     2221 ttggcgtcaa ccgcaacaaa cgagcgatgg cggtcgacct gcgcaagccg gatggtcagg
     2281 cgatcatcct gaagctgctg gccaatgccg acatcctgat cgagaacttc aagcccggcg
     2341 atatggagcg ttggggactg ggctatcacg accaactgtc gacgcggttt ccccggctga
     2401 tccattgccg tatctccggc tttggcggcg atggtccgtt gggcggtttg cccggttatg
     2461 acgcgatcct gcaggcgatg accggtctga tgagtgtgaa cggcgacgcc tcgaccggcc
     2521 cgctgcggct tggcacggca atcgtcgata tgggcaccgg cctctattcc gcgatcggca
     2581 tcctgatggc gttgcatgag cgaaccattt ccggccaggg ccaatatctc gatatgacgc
     2641 tgtatgattg cggcatggcg ctgttgcatc cgcaggcggc gaattacttc ctcaatgaca
     2701 agcgaccggc gggcaccggt aacccgcatc ccaacctcgt gccgtacgac aagtatccca
     2761 cgcgcacctg cgatatcttc atcgccagcg gcaataatgg gcaatttcgc aagttgtgcg
     2821 aactggtcgg gcggccggcg ctggccgatg atccgcggtt t
//
LOCUS       DATAVD010000735         2302 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1931275, whole genome shotgun sequence.
ACCESSION   DATAVD010000735 DATAVD010000000
VERSION     DATAVD010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2302
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1931275"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1327
                     /locus_tag="VHX39_13945"
     CDS             <1..1327
                     /locus_tag="VHX39_13945"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3992269.1"
                     /translation="AAYQYTLQADSSSLLYDWAPKLVTALEHEPGLTDVISDQQQKGL
                     QTHLVIDRATASRLGVSASQIDNTLYDAFGQRQVSTIYSAQNQYHVIMEVEPRYWQTP
                     ETLNDIYVSTSGGAAAGTETSNAVIGTVSSAKSTSAATTAASIAGSSARNASTNALAN
                     TGKGSASSGAAVSTSKETMVPLASFTKFGPGNTPLAVSHQGLFVAITISFNLAPGKSL
                     SDATAAVNDAMLRIGMPASIHGGFAGTALTFQQSLNSELLLVAAALIAVYIVLGVLYE
                     SYIHPITIISTLPSAGVGAVLALLAFNIEFSVIALIGVILLIGIVKKNAILMIDFALE
                     AERSHNMEPHDAIFEACRLRFRPIMMTTSAAILGAIPLAVSFGDGSEMRRPLGISIVG
                     GLLLSQVLTLYTTPVLYLYLDRFRLWALRWFHRMFPGLGRSAATPGAAE"
     gene            1324..>2302
                     /locus_tag="VHX39_13950"
     CDS             1324..>2302
                     /locus_tag="VHX39_13950"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HEX3992270.1"
                     /translation="MRRSRFAAALLLCAVASGCMVGPDYKPPDAPSAPAFKELAGWKP
                     SNPQDAMDKGAWWSVYHDPELDRLERMVEVSNQTVKGFEAQYRNAVALVGEARSALFP
                     TVAVPGSVTRGTLGSSGGGGGGRGAGTIWSLSGSVTWDLDVWGKVRRQIESNVAGAQM
                     SAADLANAKLSAQATLATDYFDLRAEDSLMQLLRDTVAAYQRALDITRNQYQAGTSSN
                     ADYVTALAQLQSTQAQLVGVGVQRQTFEHAIALLTGHAPADLTIAPVPLTTSVPVAPA
                     GLPSALLERRPDIASAERQMQAQNALIGVQIAAYYPDISLSASGGFESTM"
BASE COUNT          443 a          692 c          712 g          455 t
ORIGIN      
        1 tgccgcctat caatacactt tgcaggcgga cagcagttcg ctgctgtacg attgggcacc
       61 aaagctggtc accgccctgg agcacgaacc cgggcttacc gatgttattt ctgaccaaca
      121 acaaaagggc ctgcaaaccc atctggtgat cgaccgcgcc accgccagcc ggcttggcgt
      181 cagcgccagc cagatcgaca acacgctgta tgatgcgttc ggccagcgcc aggtctcgac
      241 gatctacagc gcgcaaaatc agtatcacgt gatcatggag gtggagcctc gctattggca
      301 gacaccggaa acgctgaacg acatttatgt cagtacgtcg ggcggagcgg ccgccggcac
      361 ggaaaccagc aatgcggtga tcggcacagt ctcgtctgcg aagtctacca gcgccgcaac
      421 gaccgctgcg agcattgccg gcagttcggc acgcaacgcg tcgaccaacg cgctggcgaa
      481 taccgggaaa ggcagcgcat cgtcgggcgc agcggtcagc accagcaaag aaacgatggt
      541 gccactcgcg tcattcacaa aattcgggcc aggcaatacg ccgttggcgg tcagtcacca
      601 gggattgttc gttgcgatta ccatttcgtt caacctggcg cccggcaaat cgctgagcga
      661 tgcgaccgcg gcggtcaacg atgcaatgct acggatcggc atgccggcga gcattcatgg
      721 cggttttgca ggcacggccc tgaccttcca gcaatcactc aacagcgagt tgctgctagt
      781 cgctgccgcc ctgattgcgg tctacatcgt cttgggagtt ttgtacgaga gttacatcca
      841 tccgatcacc atcatttcga cattgccctc ggcaggcgtc ggcgcggtgc tggcgttgtt
      901 ggcgttcaac atcgaatttt ccgtcatcgc cttgattggc gtgatcctgt tgatcggcat
      961 cgtcaaaaag aacgcaatcc tgatgatcga tttcgctttg gaagcggaac gttcgcacaa
     1021 tatggagccg cacgatgcga tcttcgaagc ctgccggttg cggttccggc cgatcatgat
     1081 gacgacaagt gcagccattc tgggcgccat ccctctggcc gtgagctttg gcgacggcag
     1141 cgaaatgcgt cggccgcttg gcatttccat tgtcggaggg ctgctgctga gccaggtgct
     1201 gacgctttac accacgccgg tgctgtatct ttacctcgat cgcttccgct tatgggcgct
     1261 tcgctggttc caccggatgt tccccgggtt aggccgatcg gcagcaacgc ctggagcggc
     1321 ggaatgaggc gttcgcgctt tgctgccgca ttgttgctct gcgccgttgc ctccgggtgc
     1381 atggtcggac ccgactacaa gccgccggat gcgccatcgg cgcctgcctt caaggaactc
     1441 gctggatgga agcccagtaa cccgcaagat gcgatggaca aaggcgcatg gtggtcggtt
     1501 taccacgatc ctgagctgga tcggctggaa cggatggttg aagtatccaa ccagactgtg
     1561 aaaggctttg aggcgcaata ccgcaacgca gtggcgttgg tgggcgaggc tcgatccgcg
     1621 ctgtttccga ccgtcgcagt gcccggcagc gtgacgcgcg gtaccctggg ctcgtcgggc
     1681 ggtggcggcg gcggccgagg cgcaggaacg atctggtctc tcagtggcag cgtgacctgg
     1741 gatctggatg tttggggcaa ggtccgacgg cagatcgaaa gcaatgtggc cggtgctcag
     1801 atgagtgcgg ctgacctggc aaatgcgaaa ttgtcggcgc aggcgacgct ggcgaccgac
     1861 tacttcgacc tgcgcgccga agattcgctg atgcaattgt tgcgcgatac cgtcgctgcc
     1921 tatcagcgcg cgctcgacat cacgcgcaac caatatcaag caggcacgtc gtcgaatgcc
     1981 gactacgtaa cggcgctggc gcaattgcag tcaacccagg cgcaactggt cggcgtcggc
     2041 gtgcagcgcc agaccttcga acatgccatc gccctgttga ccggccacgc acccgccgat
     2101 ctcacgatcg cgccggtgcc attgacgacg tcagtgccgg tggcgccggc cggcctgccg
     2161 tccgctttgc tggagcgtcg cccggacatt gcctcggccg aaaggcaaat gcaggcgcag
     2221 aatgcgctga tcggggtcca gattgccgct tactatccgg atatttcgct gtctgcgtcg
     2281 ggcgggttcg aaagcaccat gc
//
LOCUS       DATAVD010000736         5379 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1559466, whole genome shotgun sequence.
ACCESSION   DATAVD010000736 DATAVD010000000
VERSION     DATAVD010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5379
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1559466"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            7..1485
                     /locus_tag="VHX39_13955"
     CDS             7..1485
                     /locus_tag="VHX39_13955"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF009884.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEX3992271.1"
                     /translation="MARAALGTFALGPSSEQIGRVEEVSDGVALVSGLPDVRLDELLR
                     FKNGQFGYAQVLQRDRIGCVILDDPDGVEAGDSVRGTGDVVRVPVGPALLGRVVDPLG
                     RPLDGKGPIASETNEPIERPAPAIIDRDLVSQPVQTGLLVVDTLFALGRGQRELIIGD
                     RAIGKTTLGIDTIINQKTSDIICIYIAVGQKSSSVRRAIDAIHSNGDAGRIIVVVAGA
                     ASSPGLQWIAPFAGFTMAEYFRDRGQHALVVIDDLTKHAASHREIALLTRQSPGREAY
                     PGDVFYVHARLLERAAKLSPEKGGGSLTALPIAETDAGNLSAYIPTNLISITDGQIVL
                     DSKLFHEGQKPAVDVGTSVSRVGGKTQARGLRDAAETLRLDYAQFLEMEMFTRFGGMP
                     DARVRDQLTRGARIRAILTQPRHAPMRLADEVALVLAVQSGLLDALALPDVTTFRAGM
                     TDALDRLAGDAVAQIQTTGMLDDAHKKTLLEALRQFAGSIGP"
     gene            1482..2333
                     /locus_tag="VHX39_13960"
     CDS             1482..2333
                     /locus_tag="VHX39_13960"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF012456.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0042777 - proton motive force-driven plasma
                     membrane ATP synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FoF1 ATP synthase subunit gamma"
                     /protein_id="HEX3992272.1"
                     /translation="MTERLADIAAHIEGVRQLGAVVNAMRGIAAARVQQARGQLVAVD
                     QYAATIAAAIGRAVALLPVTAAQPASRSSRPAIVLFCAEQGFAGAFSERVLDVASADL
                     RTAELFLIGTRGNAAAVERGVTADWHSAMASHSAGIPKLADHIADALYRRIVTGSIDR
                     LDAVFARGQSGGATHVERVRLFPLDMTRFPATAGNAPLVNLPPEELLGELTADYLHAQ
                     LCHAALHAFAAENAARMIAMEAARHQIERQLATLRATQRHVRQEEITAEIIELAAGET
                     ASHPVRN"
     gene            2444..2614
                     /locus_tag="VHX39_13965"
     CDS             2444..2614
                     /locus_tag="VHX39_13965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEX3992273.1"
                     /translation="MSLYLLTWLQLKIDRRAVTALEYGLIGGVIVAVIFLGFKSLANA
                     LSTKFVSIGSSL"
     gene            complement(2632..2889)
                     /locus_tag="VHX39_13970"
     CDS             complement(2632..2889)
                     /locus_tag="VHX39_13970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992274.1"
                     /translation="MFRITFSVVCLLGLVAPAYADQPPSTPAQNQPGKRADSAVPPNG
                     IIHPAPDAGGHDKMVTPPNVDPGMAVRPPGTPGGNPDVVPK"
     gene            complement(3072..4415)
                     /locus_tag="VHX39_13975"
     CDS             complement(3072..4415)
                     /locus_tag="VHX39_13975"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03860.1"
                     /note="This protein belongs to a clade of FMN-dependent
                     monooxygenases, within a broader family of
                     flavin-dependent oxidoreductases, the luciferase-like
                     monooxygenase (LMM) family, some of whose members use
                     coenzyme F420 rather than FMN; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NtaA/DmoA family FMN-dependent monooxygenase"
                     /protein_id="HEX3992275.1"
                     /translation="MTRPQIHLAIDMSWTQVETAWRQPGSWVGPGYPDVGLFEDVARI
                     AERGLFDLIFFGDSTGIPNTWEAGIDAAVRRGVAWPRLDMSPWITAMSRVTSHLGFGL
                     TYATTFMHPFYVARLLNSLDHITNGRIAFNVITSQRRADAENYGFDELMEHGARYDRM
                     EEFIDVCKALWASVEPDAFVWNRAEGLVADPAKVRAINHVGRFFKVKGPLSVPPSPQG
                     RPVLIQAGGSPRGIRASAHFADHVFGANKSVALMAEQRQALDTALRDKGRNPAEVGII
                     WAIKLIVGETKAEAEALRERLIENVPPEAVCVWLSHNTGFDMSTLPARFTLGYLQQAI
                     VAANASPIGVVGLLLREHGPDAEITREEFMAHGLRAATGYSATYAGTATELADILEER
                     FEASGSRGGFMIGHSQDANRDLLLKVNGLLIPELQRRGRYRTRYEGRNLRENLAA"
     gene            complement(4419..>5379)
                     /gene="rutA"
                     /locus_tag="VHX39_13980"
     CDS             complement(4419..>5379)
                     /gene="rutA"
                     /locus_tag="VHX39_13980"
                     /EC_number="1.14.99.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyrimidine utilization protein A"
                     /protein_id="HEX3992276.1"
                     /translation="GFDFALSMIKLRGFGGDSEFWDYNLESFTLMAGLAAVTQQIKLF
                     ASVAVLTIPPAIVARMAVTIDSIAKGRFGINIVSGWHAAEYTQMGVWPGEHYFAERYD
                     YSTEYVQIMQELWQTGQSDFNGKYFQMDDCRLGPKPHRPIEIVSAGQSDRGMRFTAEL
                     GNYAFCLGTGVNTPTAHAPTNQRLIEAGLRAGRDVGTYVLMMVIADETDEAAMAKWNY
                     YKAGVDTKALSWMFDQAGADTQASEHSTAKAMVLPEGAVNFNMGTLVGSYASVARMLD
                     EAADVAGTKGIMLTFDDFLIGLEQFGQRIQPLMHSRGQIAAAA"
BASE COUNT         1040 a         1638 c         1654 g         1047 t
ORIGIN      
        1 ctcgggatgg cgcgcgccgc gctcggtact ttcgcactcg ggccgagttc ggaacaaatc
       61 ggccgggtcg aggaagtcag cgacggcgtg gccctggtct ccggcctgcc cgatgtgcgg
      121 ctcgacgaac tgttgcggtt caagaatggt cagttcggtt acgcgcaggt gctgcaacgg
      181 gaccggatcg gctgcgtaat attggacgat cccgatgggg tcgaggccgg cgatagcgtg
      241 cgtggtaccg gcgatgtggt tcgggtgccg gttgggccgg cgttgcttgg ccgggtggtc
      301 gatccgcttg gccgtccgct cgacggcaag gggccgatcg cctccgaaac gaacgaaccg
      361 atcgagcggc cggcccccgc gatcatcgac cgtgacctgg tgagccaacc ggtgcagacc
      421 ggcttgctcg tcgtcgatac gctgttcgct ctgggtcgcg gtcaacgcga gctgatcatc
      481 ggcgaccgcg ccatcggcaa gaccacgctt ggcatcgaca ccatcatcaa tcagaaaacc
      541 agcgacatca tctgcatcta tattgcagtc ggacaaaaga gttcgagtgt tcggcgggca
      601 attgacgcaa tccatagcaa tggcgacgcc ggccgcatca tcgtcgttgt ggctggcgct
      661 gcgagttcgc ctggtttgca atggatcgcg ccgttcgccg gcttcaccat ggcggagtat
      721 tttcgcgatc gcggtcagca cgctctggtc gtgatcgacg atctgaccaa acatgctgcc
      781 agccaccgcg agatcgctct gctgacccgc cagtcgccgg ggcgtgaggc ctatcccggc
      841 gatgttttct acgtgcacgc aaggctgctg gagcgagcgg ccaaactgtc accggaaaag
      901 ggcggcggat cgttgaccgc attgcccatc gccgagaccg acgccggcaa cctcagcgct
      961 tatatcccga ccaatcttat ttcgatcacc gatggacaga tcgtcttgga ctcgaaactc
     1021 tttcacgaag gccagaaacc ggcagtggac gtcggcacca gtgtcagtcg cgtgggcggc
     1081 aaaacccagg cgcgcgggct gcgggacgcg gcggagacac tgcgcctcga ttatgcacag
     1141 ttcctggaaa tggagatgtt cactcgtttc ggcggtatgc ccgatgcgcg ggtgcgcgat
     1201 caattgaccc ggggcgcccg catccgtgcg atcctgacac agccgagaca cgcgccgatg
     1261 cggctggccg atgaagtggc actggtgctc gcggtacaat ccggattgtt ggatgcgctg
     1321 gcattgccgg atgtgaccac atttcgggcg ggcatgaccg atgcgcttga ccgcctggcc
     1381 ggtgacgcgg tggcacagat ccaaaccacc ggcatgctgg atgacgcgca caaaaagacg
     1441 ctgctggagg cactgcgaca attcgcgggc tcgatcgggc cgtgaccgaa cggctcgccg
     1501 acattgctgc gcatattgag ggggttcggc aactcggcgc ggtggtgaat gcgatgcgtg
     1561 gtatcgctgc agctcgcgtt cagcaggcgc gcgggcaact cgtcgcggtg gatcagtatg
     1621 ccgcaacgat cgccgccgca attgggcgag cagtcgcgct gcttcccgtc acggccgcgc
     1681 aacccgcgtc gcgatcgagc cggccggcca tcgtgctatt ttgcgccgaa caaggatttg
     1741 ccggtgcatt cagcgaacgc gtactcgatg tagccagtgc cgacctgagg actgccgaat
     1801 tattcctgat cggtacacgc ggcaacgctg cggccgtaga acgaggcgta acggccgatt
     1861 ggcatagcgc catggcatcg cattccgcag ggatacccaa actcgccgac cacattgccg
     1921 acgcacttta ccgacgcatc gtgaccggat cgatcgaccg gctcgacgcg gtctttgccc
     1981 gagggcaatc gggcggcgcc acacatgtcg aacgtgtgcg tttgttccca ctggatatga
     2041 cgcgctttcc ggcaacagcc ggcaacgcgc ccctggtgaa tctgccgccc gaggaattgc
     2101 tgggcgaact caccgccgat tacctgcatg cgcagctttg ccatgccgcg ctccacgctt
     2161 tcgcagcgga gaatgcggcg cggatgattg cgatggaggc cgcacgccac cagatcgaac
     2221 gacaattggc gacgctgcgc gccacgcaac gacacgttcg gcaggaggag attaccgctg
     2281 aaattattga gctggccgcg ggggaaaccg caagtcatcc tgtccgcaac tagatcgtta
     2341 caattgacgt ttatcatagc gagcttgctg gtggcgaaac attggcagtg acagcatgat
     2401 gaaaccatcc tcccgctaca ggtggcgctg aggagggccg tcgatgagcc tttatctgct
     2461 gacctggttg caacttaaga tcgaccgccg agccgtcacc gccctcgagt acggcctgat
     2521 tggaggcgtc atcgtcgcgg tcattttcct gggctttaag agcctggcga acgcgctatc
     2581 caccaaattc gtctcaatcg gtagcagtct gtaacgtcgt gcctgcatcg gctatttagg
     2641 cacgacgtca gggttgccgc ccggcgtgcc gggaggcctg actgccatgc ctggatcgac
     2701 attcggtggg gtgaccatct tgtcgtggcc gccggcatcc ggcgccggat ggatgatacc
     2761 gtttggcggc accgcggaat ccgctctctt gccaggctgg ttttgtgctg gcgtggaagg
     2821 cggctgatcg gcgtacgccg gcgcaaccag tccaagcaga cacacgacac tgaacgtaat
     2881 gcggaacatc aggttcctcc tttcgcttcg gcgggttggg tcacactgac ggcatgctca
     2941 acacactccg ggctcggttg taaacaacaa cagccggagg cggagaaagg ttccgtgggg
     3001 ccttcaggcg ggcaagatta acgtgatgac atgaaaattt ttacagacgt accggaaacg
     3061 gaacgttccg cttatgcggc gaggttctct cgcaaattcc tgccctcgta gcgcgttcga
     3121 tagcgcccgc gacgctgcag ttccgggatc aacagcccat tcaccttcag caacagatcg
     3181 cggttggcgt cctgcgaatg accgatcata aagccgccgc gactgcccga ggcctcgaac
     3241 cgttcttcga gaatgtcggc cagttctgtt gccgttccgg cataggtcgc actgtacccg
     3301 gtggcagcgc gcaatccgtg cgccatgaac tcctcacgcg tgatttcggc gtccggccca
     3361 tgctcgcgca gcaagagtcc aaccacacca atgggtgatg cattggccgc gacgatggct
     3421 tgttgcaggt agcccagagt gaaacgggcg gggagggtgg acatgtcgaa gccggtgttg
     3481 tgcgagagcc agacacaaac ggcttccggc ggcacgttct cgatcaatcg ttcgcgcaac
     3541 gcttcggcct cggctttggt ttcgccaacg atcaacttga tagcccagat gataccgact
     3601 tcggcggggt tgcggccttt gtcacgcaac gcggtatcca gcgcctgacg ttgttcggcc
     3661 atcaatgcca cggatttgtt cgcaccgaac acgtgatccg cgaagtgcgc cgaggcacgg
     3721 atgccgcgtg gcgagccgcc ggcctggatc aacaccggac gtccttgcgg tgatggcggc
     3781 acactcaacg ggcctttgac tttgaagaat cggccgacgt gattgatcgc gcggactttt
     3841 gccgggtcgg caacgagtcc ctcggcgcga ttccaaacaa aggcgtccgg ttcgacgctg
     3901 gcccagagtg ccttgcagac gtcgatgaac tcttccatgc ggtcatagcg cgcgccgtgt
     3961 tccatcaatt cgtcgaagcc gtaattctcg gcgtcggcgc ggcgctgcga agtgatcacg
     4021 ttgaatgcga tgcggccatt ggtaatgtgg tccagcgagt tcaacaaccg cgcaacataa
     4081 aacggatgca tgaacgtcgt tgcgtaggtc aggccaaacc cgagatggct ggtcacccgc
     4141 gacatcgcgg tgatccacgg actcatgtcc agccgaggcc atgccacgcc tctccgtacc
     4201 gcggcatcga taccggcttc ccaggtattc gggatgccgg tgctgtcacc gaagaaaatc
     4261 aggtcgaaca ggccgcgctc ggcgatccgc gccacgtctt cgaacaatcc aacatcagga
     4321 tatccgggtc caacccagga gcccggttgc cgccacgcgg tttccacctg cgtccaggac
     4381 atgtcgatcg ccagatgaat ttgcggccgg gtcatcgatt acgccgctgc ggcgatctgg
     4441 ccgcggctgt gcatgagcgg ctggatgcgc tggccgaact gctcgagtcc gatcaggaag
     4501 tcatcgaacg tcagcataat tcccttggtg cccgccacgt cagccgcctc atccagcatg
     4561 cgggcaaccg aagcatagga tccaaccagt gtgcccatgt tgaaattcac ggctccctcc
     4621 ggcagcacca tcgctttggc agtggaatgc tcggacgcct gggtgtcggc gccggcctgg
     4681 tcgaacatcc aggacagagc tttcgtatcg acaccggcct tatagtagtt ccatttcgcc
     4741 atcgcggcct catcggtttc gtctgcgatc accatcatca gcacgtaagt cccgacatcg
     4801 cgtccggcgc gcagaccggc ttcgatcaag cgctggttgg ttggcgcatg cgcggtcggt
     4861 gtgttgaccc cggtaccgag gcagaacgca taattgccaa gctcggcggt aaaccgcatg
     4921 ccgcgatcac tctggcctgc gctgacgatt tcaatcggtc ggtgcggctt gggccccaag
     4981 cggcaatcat ccatttgaaa atatttgccg ttgaagtccg attgtccggt ttgccacagc
     5041 tcctgcatga tttgcacgta ttctgtgctg tagtcgtaac gctcggcgaa atagtgctcg
     5101 ccgggccaga cacccatctg agtatattcc gccgcatgcc aaccggaaac gatgttgatg
     5161 ccaaaacggc ctttggcgat gctgtcgatg gtcaccgcca tacgggcaac gatcgcaggc
     5221 ggaatggtca gcactgccac cgaagcaaac agcttgatct gttgtgtcac cgccgcgaga
     5281 cccgccatca gcgtgaacga ctccagattg taatcccaga actccgagtc accgccgaag
     5341 ccgcgcagtt tgatcatcga gagcgcgaag tcgaacccg
//
LOCUS       DATAVD010000737         2229 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1931402, whole genome shotgun sequence.
ACCESSION   DATAVD010000737 DATAVD010000000
VERSION     DATAVD010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1931402"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..339)
                     /locus_tag="VHX39_13985"
     CDS             complement(<1..339)
                     /locus_tag="VHX39_13985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992277.1"
                     /translation="MPAFKRCLFLMALLNIVSGAQAAPDVITIAIDGKPQNVLFVAPA
                     TRPVAAVVMFPGGDGVIGIDPSGSIARTGNFLIRTRDKWLARGLLFVAVDAAAGRSGT
                     IGDRVGPANLR"
     gene            complement(400..1092)
                     /locus_tag="VHX39_13990"
     CDS             complement(400..1092)
                     /locus_tag="VHX39_13990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010668045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3992278.1"
                     /translation="MMEACARCGARAQSVCNAIPDNELRRLDQASTSHTAAPGTSFIT
                     EGDAASAFFNITGGSARLYKLMSDGRRQITGFAGVGHFLGLAVSDTYAFSAEAIDPVY
                     YCRFSRAKLRTLLDDFPAMEKRLLQLASNELVAAQEQMLLLGRKTARERVASFLLAQS
                     RLGVVCPMPRTHFALPMTRGDIADYVGLTIETVSRTLTKLRSDGLIDIPNQTDVVIRN
                     RGKLERIADGMT"
     gene            1400..1849
                     /locus_tag="VHX39_13995"
     CDS             1400..1849
                     /locus_tag="VHX39_13995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992279.1"
                     /translation="MTSFSVEPLARDQVRTVYPLIREVISGLSLNAWLRFAQNAMSAR
                     RGGQAGIIVARREGHDFPSGLFCYRVDPDPALGKILVAEHFVAVDLLHPDDVLAALVA
                     ELDALGERLGCKAVRSIVHEEAVEGGLAQAGHAMVGSILGKELGTVQ"
     gene            1919..>2229
                     /locus_tag="VHX39_14000"
     CDS             1919..>2229
                     /locus_tag="VHX39_14000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007284161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEX3992280.1"
                     /translation="MRKHHRRHRLRFARLLRFRVARPRGWLAVLGPGLITGASDDDPS
                     GIATYSQSGAAFGFAMCWVMLFTYPLMAAIQEISARIGRVTGLGIAGNIRAHYPRWVS
                     TV"
BASE COUNT          386 a          679 c          704 g          460 t
ORIGIN      
        1 gcgtaggttg gccggtccga cccgatcgcc gatggtgccc gagcgcccgg ccgcggcgtc
       61 gaccgcgacg aacagcaacc cgcgtgccaa ccatttgtct cgcgtgcgga tcagaaaatt
      121 gccggtccgg gcgatcgagc cggagggatc gatgccaatc accccgtcgc caccgggaaa
      181 cataaccacc gcggcgacag gcctggttgc aggagccacg aacagcacgt tttgcggctt
      241 gccatcgatg gcaattgtga tgacgtcagg cgctgcctgc gcccctgaaa cgatgttcaa
      301 caacgccatc aggaacaggc agcgtttgaa tgccggcatg gcgcgacaac ctccgttcaa
      361 ccggcattgg ttcagactac cagcggaacc gtcaatgcgt caggtcatcc cgtcggcaat
      421 tcgttccagc ttcccgcgat tgcggatcac gacatcggtt tgattcggaa tatcgatcag
      481 gccatccgaa cggagtttcg tcagcgttcg gctgactgtt tcaatggtca ggccgacgta
      541 atcggcgatg tcgccccggg tcatcggcag cgcgaagtgc gtccgcggca tcgggcacac
      601 gacgccaaga cgcgattgcg ccaacaggaa ggatgccacc cgttcgcgcg cagttttccg
      661 gccgagcagc agcatttgct cctgcgcggc gaccagttca ttggacgcca gctgcagcag
      721 gcgtttttcc atcgcaggaa agtcgtcgag cagcgtgcgc agtttcgccc gggaaaagcg
      781 gcagtaatac acgggatcaa tcgcctcggc actgaacgca taagtgtcgg ataccgcgag
      841 gccgaggaaa tgcccgaccc cggcgaagcc ggtgatctgg cgccgcccgt ccgacatcag
      901 cttgtaaagt ctggcagaac cgccggtgat gttgaaaaac gcgctggcgg cgtcgccttc
      961 cgtgatgaag ctggtgcctg gggcggcggt gtgagatgtc gaggcctgat cgaggcgtcg
     1021 cagttcgtta tccgggattg cgttgcagac actctgcgcc cgcgctccac atcgcgcaca
     1081 tgcctccatc atctcacccg ggtccaggcc gaccagacgc gtggtcactg catgcatttt
     1141 gttccctttg actcctgagc tttttgtcac gtccgcgcga tggttgcgcg gttctcggcg
     1201 tttccggaca gctgccaaac ctggcgggcg ggtgccgcgc gttctgctgt tgtcggcatc
     1261 tcctgttttg cccaaggcac acctggttca gctttcattc acattgtgag ccatctgccg
     1321 tgtgaccgct ttgatctgaa tcaacgcagg cgcggggcag gtcgggcagc ctgcgttgca
     1381 gaactcgggc gagccctcaa tgacctcatt ctccgttgag ccgttggcgc gcgatcaggt
     1441 gcgcacagtc tatccgctga tccgcgaggt catttccggg ctgagtctga acgcgtggct
     1501 gcgctttgcc caaaatgcga tgtcggcacg ccggggcggg caggcgggta tcatcgtcgc
     1561 gcggcgcgag ggacatgatt tccccagcgg tctgttctgc tatcgtgtcg accccgatcc
     1621 ggcgcttggc aagatcctgg tggccgagca tttcgtcgcc gttgatttgt tgcatccaga
     1681 cgatgtactt gcggcgctgg tcgccgaact cgacgccctg ggcgagcgac tcgggtgcaa
     1741 agccgtacgc agtatcgtgc acgaggaagc cgttgagggt ggcctcgctc aggctggcca
     1801 cgcgatggtt gggtcaattc tcggtaagga gcttggcacc gttcaatgat ttcactggcg
     1861 ggtcggcgat aaccagaccg gcttgacgga gtgtcccggc tcggcgcagg tcgcgtgcat
     1921 gcgcaaacat catcgtcgac atcgcctgcg ttttgcccgt ctgttacgtt ttcgagtcgc
     1981 tcggcccagg ggttggctgg cggtgctggg accaggtctc attactggcg cgtcggacga
     2041 cgatccgagt gggatcgcga cctattctca gtccggcgcc gcattcggct tcgccatgtg
     2101 ttgggtgatg ctgttcacct accccctgat ggcagcaatc caggaaatca gtgcccgcat
     2161 cggccgcgtt accggcctgg gtattgccgg taatatccgc gcgcattatc cgcgatgggt
     2221 gagcacggt
//
LOCUS       DATAVD010000738         3209 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3233244, whole genome shotgun sequence.
ACCESSION   DATAVD010000738 DATAVD010000000
VERSION     DATAVD010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3209
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3233244"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(77..>3209)
                     /locus_tag="VHX39_14005"
     CDS             complement(77..>3209)
                     /locus_tag="VHX39_14005"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3992281.1"
                     /translation="VVVSETVQPRVAPAPERKFRPIRAQRDAVPDAATTDAAAPERRT
                     LAIGGIETIDHRHIVGWAWYRPTPDEPIEIEVMVDDVVVIKSRADRLRPDLAAIGAGN
                     GRHGFLVRNLAQHVPSGPHNIRVRRARDRLDIPGSPKLVIGPEQETGDADPPDNATTT
                     EAFVTEPELGDEAADTDVLSVEIKAPVEQETAVEVGPEAAGTPAPNKPGAPNARPIGN
                     LDRVSFHEIAGWVWDPENPHQPVDIEILDGDVVVLKVVADQLRSDLADAGIGTGHHGF
                     AIQNRGGVLPLSRHRVRVRRATDGKDLPHSPVTITRNVMDQGALTFLSDVMLSAVSAA
                     THSDDLTQPLGYLLTLLNVVVNGYEVLGRTENAPFKNTPADAADTTHLTGRTRDLVEQ
                     LRYAFQPLYFELSDAPEVSIIIPVHNKFSVTYDCLDSIVKAPPDRSFEIIIADDCSHD
                     ETLLAALVFAGGVRIVRNSTNLGFVRTCNAGAAQARGRYLFFLNNDTLVKPGWLDELV
                     LTFEQVPNIGIAGSKLLFPDGKLQEAGGIIWRLGDGWNWGRGRDPNEPGFSFLRDADW
                     VSGAALMIERALFGQLGGFDEYYAPAYYEDTDLAFRVRALGKRVVVQPASEIVHLEGV
                     SAGTDTSGPGMKRFQVVNHAKFYRRWKDTLITHRLNGQQPEQEAERLVRQRAYFIDDT
                     VPTPDQDAGSNAAVEHMRALLAMGYKVTFLPADNMARIDPYTARLQRLGIECPVYPYY
                     WSVEEVFRKAAQTPDLVYLHRFSNASKYATMVRRYFPECRVVYNVADLHFLRMERQAA
                     VDPGSVNSGQVAAQRRDEISVMRNVDDVIVHSPVEAALLREADASLKVTVVPWTVYSR
                     PSALPFSERSGTAYVGGFGHPPNLDAVRWLVGQILPLLKQQVPACTTYLVGSKMPDEV
                     QAMRGPGVVPLGFVPVLADILHKLRCTVVPLRYGAGIKGKVLESFAHGLPCVMSEVAA
                     EGLELSGKLAWLVARSPAEFAEKIARVHQDEGFNRTLSEAGLMYIEERCGAGVVMEAL
                     RAAVKGSRSTASD"
BASE COUNT          622 a         1090 c          912 g          585 t
ORIGIN      
        1 gaacggtagt tatacgacat ccggaaggcc tacgctcggt ccgactcagt cgtcagttct
       61 ggacgagcat cgctgactag tccgacgcgg ttgaacgtga ccccttcacc gcagcccgca
      121 atgcctccat caccactcct gccccgcagc gctcttcaat atacatcagc cccgcctcag
      181 acagcgtccg attgaagccc tcatcctgat gcacccgtgc aatcttctcg gcaaactccg
      241 ccggcgaacg tgccaccagc cacgccagtt tcccgctcag ttccagcccc tccgccgcca
      301 cttcgctcat cacgcacggc aggccgtgag caaaactctc cagcaccttg cccttaatcc
      361 ccgcaccata ccgtagcggc actactgtgc atcgcagctt gtgcaagata tccgccagca
      421 ccggaacgaa cccgagcggc acgaccccgg gcccgcgcat cgcctgtacc tcatccggca
      481 tcttgctgcc gaccaggtaa gtcgtgcatg ccggcacctg ctgcttcagc aacggcagga
      541 tctgacccac cagccagcgc accgcatcga ggttcggcgg atgcccgaaa cccccgacat
      601 atgccgtgcc ggaccgctca gagaacggca atgccgacgg ccgggaatac accgtccacg
      661 gcactaccgt caccttcagc gaagcatcgg cttcccgcag caaagctgcc tccaccggcg
      721 agtgcacaat cacatcgtcc acattacgca tcacggaaat ctcatcgcgt cgctgtgccg
      781 ccacctggcc cgaattcacg gagccggggt caaccgccgc ctgccgttcc atgcgcagga
      841 agtgcagatc ggccacgtta taaaccaccc ggcattccgg aaaataccgc cgcaccatgg
      901 tcgcgtattt ggaagcgttg ctgaagcgat gcaaatacac cagatccggc gtctgcgcgg
      961 ctttgcggaa cacctcctcg accgaccagt aatacggata cacggggcac tcgatcccca
     1021 atctctgcaa ccgggccgta tacggatcga tccgggccat attgtcggcg ggcaggaacg
     1081 tcaccttata gcccatcgcc agcaacgccc gcatgtgttc gacagcagcg ttggagccgg
     1141 cgtcctggtc cggcgtcggc accgtatcgt cgataaaata cgctcgctgc cgcaccaacc
     1201 gctcggcctc ctgttcgggc tgctggccgt tcagccgatg cgtgatgagc gtgtccttcc
     1261 agcgccggta gaatttggcg tgattgacca cctggaacct tttcatcccc ggtcccgagg
     1321 tgtcggtccc cgcactcacc ccctccaaat gcacgatttc tgaggccggc tgcaccacca
     1381 cccgcttgcc cagagcgcgg acgcggaatg ccagatcggt gtcctcataa taggccggcg
     1441 cgtagtactc gtcgaagccg cccagttggc cgaacagagc gcgctcgatc atcagcgcgg
     1501 caccggatac ccagtcggca tcgcgcagaa acgaaaatcc tggttcgttc ggatcgcgcc
     1561 cgcggcccca gttccacccg tcgccaagcc gccagatgat gccaccggcc tcctgcagct
     1621 tgccgtcggg gaacagcagc ttggagccgg cgatgccaat gttcggcacc tgctcgaacg
     1681 tcagcaccag ctcgtcgagc cagcccggct tcaccagcgt atcgttgttc agaaagaaca
     1741 aatatcggcc acgggcctgt gccgccccgg cattgcaggt gcgcacgaac ccgagattgg
     1801 ttgaattgcg cacgatgcgc acaccgccgg caaacaccaa agccgccagc aacgtttcat
     1861 catgcgagca gtcgtcggcg atgatgatct caaagctacg gtccggcggc gccttcacga
     1921 tcgagtcaag gcagtcgtag gtcacggaaa acttgttgtg taccggaatg ataatcgaaa
     1981 cctccggagc gtccgaaagc tcgaaatata gcggttgaaa ggcgtaacgc agttgctcga
     2041 ccagatcgcg ggtgcggccg gtcaggtgtg tggtatccgc cgcgtcggcc ggcgtgtttt
     2101 taaacggtgc gttttcggta cggcccagta cttcgtagcc gttcacgacg acattcagca
     2161 gcgtgagaag ataaccgagc ggctgcgtaa gatcgtctga atgcgttgct gctgagaccg
     2221 ccgacaacat gacgtcgctc aggaacgtca acgcgccctg atccatcacg ttgcgggtga
     2281 tcgtcaccgg cgagtgcggc agatccttgc cgtcggtcgc gcgacgcacg cgcactctgt
     2341 gtcgcgacag cggcaggacc ccgccgcggt tttggatcgc aaagccatga tgtcccgtgc
     2401 ctataccggc gtcggccagg tcggagcgga gttgatcggc aacgactttc aggaccacga
     2461 catcgccatc gaggatctcg atgtcgaccg gctggtgggg attctcggga tcccagaccc
     2521 aaccggcaat ttcatgaaag ctcacacggt cgaggttacc gatcggccgt gcattaggcg
     2581 ctcccggctt gttcggagcg ggcgttccgg cagcctcagg tccgacttca acggcggtct
     2641 cctgctcgac cggggctttg atctcaacgc tcagcacatc cgtatcggcc gcttcgtcgc
     2701 caagctccgg ctcagtcaca aaggcctcgg ttgtggttgc attgtcaggc gggtccgcgt
     2761 caccggtctc ctgttcaggg ccgattacca gctttggcga gccagggatg tcgagccgat
     2821 cgcgggcgcg gcgcacacgg atgttgtgcg gccctgacgg aacgtgttgt gccagattac
     2881 gaaccaggaa gccgtggcgt ccgttgcctg cccctatcgc tgccagatcc ggccgcagcc
     2941 gatcggcgcg tgactttatc acgacgacat cgtcgaccat gacctcgatt tcgatcggct
     3001 cgtcaggcgt cggacgatac cacgcccaac cgacgatatg ccgatggtcg atcgtctcga
     3061 ttcccccaat tgccagggtg cgccgctccg gcgccgcagc atcggtcgta gccgcgtccg
     3121 gcaccgcgtc ccgctgcgca cggattgggc ggaatttgcg ttccggcgca ggggcaacgc
     3181 gcggttgcac cgtttccgaa acgacaacg
//
LOCUS       DATAVD010000739         9086 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3233335, whole genome shotgun sequence.
ACCESSION   DATAVD010000739 DATAVD010000000
VERSION     DATAVD010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9086
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3233335"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..886)
                     /locus_tag="VHX39_14010"
     CDS             complement(<1..886)
                     /locus_tag="VHX39_14010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogenase component 1"
                     /protein_id="HEX3992282.1"
                     /translation="MQLTVWTYEGPPHVGAMRVATGMQGLHYVLHAPQGDTYADLLFT
                     MIERRDRRPPVTYTTFSARDLGGDTAELFKAAARNAYDRFKPQAMIVGASCTGSLIQD
                     DPGGLARALELPIPVVSVDLPAYQRKENWGAAETFYQLVRALAGPSAPPPGTKRPARD
                     VGMRPRCNLLGATSLGFRHRDDVAEIAALLSRLGIDINVTAPMGAAPADLKRLGDADF
                     NVVLYPEIAGLAASWLQRTFGQPSTKIVPIGVSATREFIEEVAGLAGVDATAVLAACS
                     TRLPWYSRSVDSTYLTGKR"
     gene            complement(889..2172)
                     /locus_tag="VHX39_14015"
     CDS             complement(889..2172)
                     /locus_tag="VHX39_14015"
                     /EC_number="1.3.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016730 - oxidoreductase activity, acting
                     on iron-sulfur proteins as donors [Evidence IEA];
                     GO_process: GO:0015995 - chlorophyll biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin:protochlorophyllide reductase
                     (ATP-dependent) subunit N"
                     /protein_id="HEX3992283.1"
                     /translation="MTGSAMLSPLVDAHGERPILRERGQREVFCGLTGIIWLHRKIQD
                     AFFLVVGSRTCAHLIQSAAGVMIFAEPRFATAIMEEKDLAGLTDANDELDRIVTQLIV
                     RRPDIRLLFLVGSCPSEVIKLDLSRAALRLSQTFSPRVRILNYSGSGIETTFTQGEDA
                     CLASLVPALPPLGTSEDQLLIVGSLADVVEDQFARLFDALGIGPVRFLPPRRSTALPA
                     VGTNTKFLLAQPFLADTARALEARGAIRLAAPFPLGVEGTTAWLRAAADAFGVKDEIF
                     VTVTQPYRARAARALGPYREKLAGRSIFLFPDSQLEIPLARFLSRELSMQLVEVGTPY
                     LHREHLAEELRLLPSHVPLTEGQDVDLQLDRCRAARPDLVVCGLGLANPLEAEGMTTK
                     WSIELVFTPIQGYEQAADLAELFARPLVRRAKLVP"
     gene            complement(2169..2678)
                     /gene="bchF"
                     /locus_tag="VHX39_14020"
     CDS             complement(2169..2678)
                     /gene="bchF"
                     /locus_tag="VHX39_14020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030494 - bacteriochlorophyll biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-vinyl bacteriochlorophyllide hydratase"
                     /protein_id="HEX3992284.1"
                     /translation="MAQTSPMRGRPLYTADERLRRDASIWTLVQGVLAPVQFTVFLIS
                     LGLVLHCLATGHGLAAATTSVVVKTFVLYAIMITGSIWERDVFGRYLFAPAFFWEDVV
                     SMLVLALHTTYLIAVFSGAVDGERQMWLALAAYASYAVNATQFVLKLRTARRQEHMWT
                     PAGSLSHPS"
     gene            3038..3943
                     /locus_tag="VHX39_14025"
     CDS             3038..3943
                     /locus_tag="VHX39_14025"
                     /inference="COORDINATES: protein motif:HMM:NF014375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HEX3992285.1"
                     /translation="MTSFMDRITESERWIGRVQHGLDVLSEGLPGDDASVLDKPAARP
                     SRDAILSSIVEGEILPRLARIRRNAAPAAPDARPTTTRHDSEAFIHLLLTQDAAAAVA
                     FIDALRRNGVTPASLYLGIVANAAHRLGDLWQEDRCGFDQVAISMGRLQIVLRSLSPH
                     FQMEALRPARTDSVLLAPAPGEQHTFGLLMLAEFFRREGWHVAGGPVMSAKDVVGIVR
                     NSWIDVVGFSIGSAGMLDGLADCVRRVRRASCNAGLCVMVGGPLFLMRPDLVESLGAD
                     VVASDAAEAVRQARGLLAIRTASAD"
     gene            4017..5441
                     /gene="ppsR"
                     /locus_tag="VHX39_14030"
     CDS             4017..5441
                     /gene="ppsR"
                     /locus_tag="VHX39_14030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010109 - regulation of photosynthesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator PpsR"
                     /protein_id="HEX3992286.1"
                     /translation="MKAFGTPKTTLGDLNAEAAACLIAAASDIALILDVDGVILDVSI
                     GSQELADDLTGHTKWLKKHWTDTLAEDSRIKARGLLTEAAAQRGPRWRQLNHLAANPD
                     GVPILYAAMRIGAPARIIAFGRDLRAVSSLQRRLVDAQQSMERDYAHIRHVETRYRLL
                     FQMASDAVLIIDCATRRLLDSNPTARRAFGDAAEPGRGWLGTSTFTPEGARSVDLLLS
                     GVQASGRADDVNARLAKDGREVTVSASLFRDDKNTAYLLRIAEPTADAAGGSIPKLKA
                     KLLKLMESAPDGFVVTGVDGRIITANAAFLQLAQLPTEAQARDQPLDQWLGRSSVDVD
                     ILTSNIRHHGSVRLFASLMRGELGQLSEVEVSAVTVMNGGQPCFGYAIRDIGRRLRGQ
                     PGAEHAFPRSLDHLSDVVGRMALKDIVREATDIIERLCIEAALNLTGDNRASAAEVLG
                     LSRQSLYVKIRRYGLGDPAPQGAD"
     gene            5454..6443
                     /gene="chlG"
                     /locus_tag="VHX39_14035"
     CDS             5454..6443
                     /gene="chlG"
                     /locus_tag="VHX39_14035"
                     /EC_number="2.5.1.62"
                     /inference="COORDINATES: protein motif:HMM:NF005742.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chlorophyll synthase ChlG"
                     /protein_id="HEX3992287.1"
                     /translation="MTTAPAASSSWVASPESVLPDRALIEPAQRCDPERTSGRHSSMP
                     AVLELLKPITWFAPMWAFGCGVVSSGVPVSSRWWAVVLGVVLAGPMVCGTSQAVNDWF
                     DRQVDAINEPNRPIPSGRLPGRRGLHIAIGWTILSLSVAAALGRWGFGAAVVGLMLAW
                     AYSAPPLRLKQNGWWGNAACAACYEGLPWVTGAAVMTSARPDWHVVTIAALYSAGAHG
                     IMTLNDFKSVEGDRRMGIFSLPVLLGVEAAANVACVAMALPQVVVIALLLAWGYVTFA
                     FVVGLLLMAQMLLMVRLLQNPRDKAPWYNATGTTLYVIGMLVTAFMLRSLLAA"
     gene            6443..7636
                     /locus_tag="VHX39_14040"
     CDS             6443..7636
                     /locus_tag="VHX39_14040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045550 - geranylgeranyl reductase
                     activity [Evidence IEA];
                     GO_process: GO:0015995 - chlorophyll biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0030494 - bacteriochlorophyll biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="geranylgeranyl diphosphate reductase"
                     /protein_id="HEX3992288.1"
                     /translation="MGPVREIYDVVVVGGGPSGATAAGELARLGRSVLLLDRGGRIKP
                     CGGAIPPRLIQDFAIPDDLLCARITSARMVSPSSKGVDMPIANGFVGMVDRGHFDEWL
                     RDRAARRGAERCAGTFSKITRDGKGIAEINFQLKGNDPADRDRRVRARVVIGADGAKS
                     AVAAQCIQGARRMPHVFAYHEIVRAPVAGFDGGRCDVYYQGRLSPDFYGWVFPHGDTV
                     SVGSGSMCKGFSLRQSVSALREAAGLAGAEIVRREGAPIPLRPLRRWDNGRDVIVSGD
                     AAGVVAPASGEGIYYAMEAGRLAAEAAEAFLATGRVQALRSARRRFMRAHGRVFLILR
                     IMQWFWYSSDKRRERFVSICQDPDVQRLTWDSYMNKRLTRTGPIAHLRIFFKDLAHLL
                     GLVHA"
     gene            7633..8112
                     /locus_tag="VHX39_14045"
     CDS             7633..8112
                     /locus_tag="VHX39_14045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002726291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TspO/MBR family protein"
                     /protein_id="HEX3992289.1"
                     /translation="MTGDIVGAVAWGIIVAGAGAFLTELSPWYYALKRPSWQPPDWLF
                     GPAWTVILALASLSLFLGLHHAQSRQERITIAGLFVLNGALNLLWSPLFFKFRRPDWA
                     LLEVPLLWLSILAPILVTTPISWVAGVLLIPYLMWVSFAAILNLAVVRLNRPFGANT"
     gene            complement(8423..8995)
                     /locus_tag="VHX39_14050"
     CDS             complement(8423..8995)
                     /locus_tag="VHX39_14050"
                     /inference="COORDINATES: protein motif:HMM:NF044670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992290.1"
                     /translation="MKAAAWLRRYVAHQDPVTAAANFVALLVASNGPVYPVYVLALIG
                     WDHSGAWLSMLASPLFFAVPAISRLSPRLGRVALPLVGIANTVWCAALFGSASGVGLF
                     LLPCIVLAMLLLCVDDRWLAILLAGMAIACLILLTEFSLPGLMALPPSAPEALTRLNV
                     FSVATLTAFVAFALARALAIKPCRHEMPAR"
BASE COUNT         1644 a         2740 c         3037 g         1665 t
ORIGIN      
        1 cgcgcttgcc cgtgagatag gtcgagtcga ccgagcgcga ataccagggc agccgcgtcg
       61 agcaggccgc gagcacggcc gtggcatcga cgcccgcgag accggccacc tcttcgatga
      121 actcgcgggt ggccgacacc ccgattggaa cgattttggt tgacggctgg ccgaacgtcc
      181 gctgcagcca ggacgcggcc aatccggcga tctcgggata cagcaccacg ttgaagtcgg
      241 catcgcccag ccttttgagg tcggcgggcg ccgcgcccat cggggccgta acattgatgt
      301 cgatgcctag ccgcgacaac agcgcggcaa tttcggcgac atcgtcacga tgacggaagc
      361 cgagcgaggt agcgcccagc agattgcagc gcggtcgcat cccgacgtcg cgcgctggcc
      421 gcttggtgcc aggcgggggt gccgacggtc ccgccagcgc gcgcaccagc tgataaaagg
      481 tctcggcggc gccccagttc tccttgcgct gataggccgg caggtcgacg ctgaccaccg
      541 ggatcggcaa ttccagcgcc cgcgcgaggc cgccgggatc gtcctggatc agcgagccgg
      601 tgcaggacgc gccgacgatc atcgcctgcg gcttgaatcg gtcataggcg ttgcgcgcgg
      661 cagccttgaa cagttcggcg gtatcgccgc cgagatcgcg cgcggagaag gtggtgtagg
      721 tcacgggcgg gcgccggtcg cggcgttcga tcatcgtgaa cagcaagtct gcgtaggtgt
      781 cgccctgtgg cgcgtgcagg acgtagtgca ggccctgcat tcccgtagcg acgcgcatcg
      841 cgccgacatg gggaggtcct tcatatgtcc acaccgtgag ctgcatggtc atggcaccag
      901 cttcgcgcgg cgcacgagcg ggcgcgcaaa caattcggcg aggtcggcgg cctgctcgta
      961 accctggatc ggcgtaaaca cgagctcgat cgaccatttg gtcgtcatgc cctcggcttc
     1021 cagcggattg gcgagaccga ggccgcaaac caccagatcg ggccgtgccg cgcggcatcg
     1081 gtcgagctgc agatcgacgt cctgaccctc ggtcagcgga acatggcttg gaagcagcct
     1141 gagttcttca gccagatgct cgcgatggag ataaggcgta ccgacctcga ccagctgcat
     1201 cgacaattcg cgcgacagaa accgggccag cggaatttcg agttgagaat cggggaagag
     1261 gaaaatgctg cgcccagcaa gtttttcgcg gtacggtccg agcgcccggg ccgcgcgtgc
     1321 ccgatagggt tgtgtgaccg tgacgaagat ctcgtccttg acgccgaagg catcggccgc
     1381 agcccgcaac cacgcggtgg taccttcgac gcccaaggga aacggcgcgg ccagccgtat
     1441 cgcgccccgg gcctccaggg cccgagccgt gtcggccagg aacggctgcg ccagaaggaa
     1501 ttttgtgttg gtcccgaccg cgggaagcgc cgtcgaacgg cgtggcggca ggaaacgcac
     1561 cggcccgatc cccagcgcgt cgaacaggcg ggcaaattga tcctcgacga cgtcggcgag
     1621 cgagcccacg atcagaagct ggtcctcgct cgttcccagc gggggtaacg cgggaacgag
     1681 cgaggcgaga caggcatcct cgccttgcgt gaatgttgtc tcgataccgc ttcccgaata
     1741 attgagaatg cgtaccctgg gcgaaaaggt ctgcgacagc cgtagcgcgg cccgcgacag
     1801 atcgagcttg atgacttcgg acgggcagga tccgaccaga aacagcaacc ggatatccgg
     1861 gcggcgcacg atcaattggg tcacgatgcg gtcgagttcg tcgttggcgt cggttagacc
     1921 ggccagatcc ttctcttcca tgatcgcggt ggcgaagcgc ggctcggcga agatcatcac
     1981 gcctgccgcg gactggatca gatgcgcgca ggtgcgcgaa cccaccacga gaaagaacgc
     2041 gtcctggatc ttgcgatgca gccagatgat gccggtcagt ccgcagaaca cctcccgttg
     2101 gccccgctct cgcaggatcg gccgctctcc gtgcgcatcc acaaggggag ataacatggc
     2161 ggaaccggtc atgacggatg actcagcgag ccggcgggcg tccacatgtg ctcttgccgg
     2221 cgggcggtcc gcaacttcag gacgaactgg gtggcgttga cggcgtacga cgcgtaggcg
     2281 gccagggcca gccacatctg gcgctcccca tctaccgccc cggaaaaaac cgcgatcagg
     2341 taggtggtgt gcaaggccag caccagcatg ctcacgacgt cttcccagaa gaaggcgggg
     2401 gcgaagaggt aacggccgaa gacgtcgcgc tcccagatcg aacccgtgat catgatcgcg
     2461 tacagaacga atgtttttac caccaccgat gtggtggcgg cggccagacc gtgcccggtc
     2521 gccaggcagt gcagcaccag gcctaggctg atcaggaaaa ccgtgaactg cacgggtgcc
     2581 aggacgccct gcaccagggt ccagatcgac gcgtcgcgcc ggagccgctc atccgcggtg
     2641 tagagcgggc gcccgcgcat ggggctggtc tgggccatgc gggtctcccg gcggccggcg
     2701 gttgcgcccc acgggcaaca gtcagccgat ccaatgaagc gggtgaacgg gtcaaacgta
     2761 aacatggatt gacaacaaag ccgaagcgct gtcggaattc gtctgggacg gtgaacaatc
     2821 gccgcctgcg cagcacgacg tgtgtgccag tgacgaactg ggtaataaac tggtaggagc
     2881 gtaactggat aaacggttta tcacttcgcc ctccctccgc aagatgcagc cgcaagagga
     2941 ggctacggcg cgtccgatca gactgtcaac tgttcagtac gtaaatatca gttgacacat
     3001 tcagccggca gcggtgaagt gacgagggga gatgatcatg accagcttta tggatcggat
     3061 cactgaatcg gagcgatgga tcggcagggt gcagcatggt cttgacgtgt tgtcggaggg
     3121 ccttcccggt gacgacgcgt ctgtgctgga taagccggcc gcccgaccca gccgggacgc
     3181 tattctgtcc tcgatcgttg agggtgagat cctgccgcgc ctcgcgcgca ttcgcaggaa
     3241 tgccgccccg gccgcgcctg acgccaggcc aacgacaaca cgccacgaca gcgaggcctt
     3301 catccacctg ctgctgaccc aggatgccgc cgccgccgtg gcgttcatcg acgccctgag
     3361 gcggaacggc gtgacgccgg cttcgctcta tctggggatc gtggcaaacg cggcgcaccg
     3421 tctgggcgac ctctggcagg aggatcgctg cggcttcgat caggtcgcaa tcagcatggg
     3481 ccggctacag atcgtgttgc gctcgctatc gccgcatttt cagatggaag cgctcaggcc
     3541 cgcccggact gacagcgtgc tgctggcgcc ggcaccgggt gaacaacaca cgttcggact
     3601 gcttatgctg gcggaattct tccgccggga agggtggcat gtcgcgggcg gcccggtgat
     3661 gtcggccaag gacgtggtcg gcattgtgcg caattcatgg atcgatgtcg tcggattttc
     3721 gatcggttcg gctggcatgc tggacggttt ggccgattgc gtcaggcgag tccggcgtgc
     3781 gtcgtgtaat gccggactgt gcgtgatggt cggcggtccg ttgttcttga tgagaccgga
     3841 tctggtggag agcctgggcg ccgatgtggt ggcgagcgat gccgcggagg cggtcaggca
     3901 ggcgcgtgga ctactggcga tccgaacagc gtcggcggac taatccatag gtggcaacgc
     3961 cgatgccccg gttcggattt ggaacaaggc tggcgaagtg gaggattcgg ctgaccgtga
     4021 aggcgttcgg aaccccgaag acgacactgg gcgatctcaa tgccgaggcc gctgcatgcc
     4081 ttattgcggc ggcatccgat atcgccttga tcctggatgt ggacggcgtg atcctcgatg
     4141 tatcaatcgg ctcgcaagaa ctcgcggatg acctcaccgg gcacacgaag tggctgaaaa
     4201 aacactggac cgacaccttg gccgaagaca gccgaatcaa ggcccggggg ctgctgaccg
     4261 aggcggcagc ccagcggggg ccgcgatggc gccagctaaa ccatctggcg gctaacccgg
     4321 acggggtgcc gatcttatac gccgcgatgc ggataggagc gccggcccgg atcatcgcgt
     4381 tcgggcgcga tcttcgtgcg gtgtcgtctc tgcaacgccg gctcgtcgat gcgcagcagt
     4441 cgatggagcg cgactatgcg cacattcgcc atgtcgaaac acgctatcgg ttgctgtttc
     4501 agatggcatc cgatgccgtg ctgatcatcg attgtgccac ccgccgcctg ttggacagca
     4561 acccgaccgc gcgccgcgca ttcggcgatg ccgccgaacc cggacgcggt tggctgggga
     4621 catcgacctt caccccggag ggtgctcgtt cggtcgatct gctgctgtcc ggggtacagg
     4681 catcgggacg agcggacgat gtcaatgcgc ggctcgcgaa ggacgggcgg gaagtcacgg
     4741 tatccgcttc gttgtttcgg gatgacaaga ataccgctta cctcctgcgt atcgccgaac
     4801 cgacggccga tgcggccggc ggctcaattc cgaagttaaa ggccaaactg ctcaagttga
     4861 tggaaagtgc gcccgacggc ttcgtcgtaa ccggcgtcga tggaagaatc atcaccgcga
     4921 acgcggcgtt tctacaattg gcgcaactgc caacggaggc gcaggcccgg gaccagcctc
     4981 tggatcagtg gctgggtcgt tccagcgtgg atgtagacat tctgacgtcg aacatccggc
     5041 atcacgggtc ggttcgacta ttcgcatcct tgatgcgtgg cgaactcggc cagttgtcgg
     5101 aggtcgaggt atccgccgtt acggtgatga atggaggcca gccatgcttt ggctacgcga
     5161 tccgcgacat cgggcgccgg ctgcgggggc agcctggggc agagcatgcg tttccacggt
     5221 ccctcgacca tctgagcgac gtggtcggcc gaatggcatt gaaggacatc gtgcgtgagg
     5281 cgaccgatat cattgaacgg ctgtgcatcg aggcagccct gaatctgaca ggcgacaacc
     5341 gagcctccgc ggccgaggtg ctggggctga gccggcagag cctctacgtg aaaatccgcc
     5401 gatatggtct cggcgatccc gcgccgcagg gcgccgactg aaggaccgat cgcatgacta
     5461 cggctcctgc tgcctcatcg tcctgggtcg catcgcccga atcggttctg ccggatcgtg
     5521 ctttgatcga gcccgcgcag cgttgcgacc cggaacgaac gtcagggcgg cattcgtcga
     5581 tgccggctgt tctggaactg ctgaaaccga ttacctggtt cgcgccgatg tgggcatttg
     5641 gttgcggtgt ggtttcctcc ggcgtgccgg tgtcaagccg ctggtgggcg gtcgttctgg
     5701 gcgttgtgtt ggccggaccg atggtctgcg gcacaagcca ggcggtgaac gattggttcg
     5761 atcggcaggt ggatgcgatc aacgagccga accggccgat tccgtcgggc cggcttccgg
     5821 gccggcgcgg tctgcacatc gcaatcggat ggaccattct gtcgctgtcc gtcgcggccg
     5881 cattgggtcg atggggcttc ggtgccgcgg tcgtgggatt gatgctggcc tgggcgtaca
     5941 gcgccccgcc gttgcggctg aagcagaacg gctggtgggg caatgcagcc tgtgcagcct
     6001 gctatgaggg gcttccctgg gtcacggggg cggccgtgat gacatccgcc cgtcccgact
     6061 ggcatgtcgt gaccatcgca gcgctctaca gtgcaggcgc ccatggaatc atgacgctta
     6121 acgatttcaa atcggtcgaa ggcgacaggc gcatgggcat tttctcattg ccggtgttgc
     6181 tcggtgtcga agcggcggcc aacgttgcct gtgtcgccat ggcgcttcca caggtggtcg
     6241 tgatcgccct gctgctggca tggggatacg taacgttcgc attcgtggtg gggctgctgc
     6301 tgatggccca gatgctgctg atggtgcggc ttctgcaaaa tccgcgcgac aaggcgccct
     6361 ggtataacgc gactggaacg accctctatg tgatcggcat gctggtaacc gccttcatgc
     6421 tgcgatcgct gttggcggca tgatgggccc cgtgcgcgaa atctacgatg ttgtcgtcgt
     6481 cggtggcggc ccatccggag cgaccgccgc gggcgaattg gcgcggcttg gccgatcggt
     6541 gctgctgctg gatcgcggtg ggcggatcaa accctgcggt ggcgcgatcc cgccgcggct
     6601 gatccaggac tttgccattc ctgacgatct gctatgcgca cgcattacgt ccgcgcggat
     6661 ggtgtctcca tcgtccaagg gcgtggacat gccgatcgcg aatggcttcg tcggcatggt
     6721 ggaccgcggc cattttgacg aatggctgcg cgaccgagcg gcgcggcgcg gcgccgagcg
     6781 gtgtgcaggc acgttttcca aaatcacgcg cgacggcaag ggaatcgcgg agataaactt
     6841 tcaactgaaa ggaaatgatc cggccgatcg ggaccgccgt gtgcgtgccc gcgtcgtcat
     6901 tggcgcggat ggcgccaaat cggccgtcgc ggcccaatgc atccaaggtg ccaggcgaat
     6961 gccgcacgta ttcgcctatc acgagattgt tcgcgcgccc gttgcgggtt tcgatggcgg
     7021 gcgttgcgac gtctattacc aggggcggct atcgccggat ttctatggat gggttttccc
     7081 gcatggcgat accgtcagcg tcggcagcgg ttcgatgtgc aaggggtttt cactacgcca
     7141 gtcggttagc gccctgcgtg aggcggccgg actggccggt gcggaaatcg tccgtcgcga
     7201 aggtgcgccc atccctttgc ggccgttgcg acgttgggat aacggccggg atgtgatcgt
     7261 ctccggcgat gcggcgggcg tggtcgcgcc ggcctccggc gagggtatct actatgcgat
     7321 ggaagcgggc cggctggcag ccgaggccgc ggaggcgttt ctggcaacgg gccgggtgca
     7381 ggcgctgcgt agcgctcgac gccgcttcat gcgggcacat ggacgcgtgt tcctgatcct
     7441 gcgcattatg cagtggttct ggtactccag cgacaagcgg cgagaacgat ttgtcagtat
     7501 ctgccaggat ccggatgtac aacgcctcac ctgggattcc tacatgaaca aacggctgac
     7561 ccgaacaggt ccgatcgcac atctgcggat tttcttcaaa gatttggccc atctgctggg
     7621 tctggttcac gcttgaccgg ggacatcgtc ggcgccgtcg cctggggtat catcgtggcg
     7681 ggggccggag cgtttctgac ggaactctcg ccctggtact acgccctgaa gcgaccatcg
     7741 tggcagccac ccgactggtt gttcggtccg gcctggaccg tgatcctggc gttggcgtcc
     7801 ctgtcgcttt ttcttggtct gcaccatgcc caaagtcgcc aggagcgcat cacgattgca
     7861 ggactgttcg tgctgaacgg cgcgctgaac ctgctttgga gtccactgtt tttcaaattt
     7921 cgcaggcctg actgggcact tctcgaggtc ccgttgctgt ggctgtccat cctggcgcca
     7981 atcctggtga cgacgccgat ttcatgggtc gctggtgttt tgctgattcc ctacctgatg
     8041 tgggtttcat tcgccgctat cctgaacctg gccgttgttc ggctgaatcg gccatttggg
     8101 gcgaatacct agggaccgcc gcaagtttgg gggcattggt taggtggaat ttctgtccgc
     8161 cgcgggaacc gtacgagccg ttgcagaccg cgcggcgaac ttgaagcacg agactgaccc
     8221 tttggagatt gcggtcccaa ccgtcaaccc ggtgcgtggc gctgggcata attgaccatc
     8281 cattcgttct ggccggttca gcgactgcaa ggcggtcccc aattttcgcg gcggcgcaat
     8341 ggacttgcgc tcgccctgtt cgccctggaa atgatgtatc atggcacgaa tgcgatctgg
     8401 tttgcctgcc ggaagcgcga cgctatcttg ccggcatttc gtgccggcac ggcttgattg
     8461 ccaacgccct ggccaaggcg aatgcaacga acgccgtcaa ggtcgccacg ctgaacacgt
     8521 tcaggcgcgt gagcgcttca ggggcgctcg gcgggagcgc catcaggccg ggcagcgaaa
     8581 attccgttag caggatcaaa caggcaatcg ccatcccagc cagcaatatc gccagccaac
     8641 ggtcatccac gcacagcagt aacatagcca gcacgatgca gggcagcaga aacaatccca
     8701 ccccggaggc agatccgaat aacgccgcgc accacacggt attcgcgata ccgaccaacg
     8761 gcagcgccac acggcccagg cggggtgata agcgcgatat cgccggcacc gcgaaaaaca
     8821 gcgggctcgc cagcatcgat agccatgcgc ccgagtggtc ccaaccgatc agcgccaata
     8881 cataaaccgg atataccggg ccgttgctcg cgacgagcaa tgccacgaaa ttggcggcag
     8941 ccgtcaccgg atcttgatgt gcaacatagc ggcggagcca ggctgccgct ttcatcgcgg
     9001 ccgtagcgca taatggctga tgccccattc ggttccgcca cgcgcaccga acagttcggc
     9061 ggtcgagagg aagaacagcc gccacc
//
LOCUS       DATAVD010000740         4548 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1186518, whole genome shotgun sequence.
ACCESSION   DATAVD010000740 DATAVD010000000
VERSION     DATAVD010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4548
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1186518"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..512
                     /locus_tag="VHX39_14055"
     CDS             <1..512
                     /locus_tag="VHX39_14055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992291.1"
                     /translation="ANISFYFVLTLFLQNGLGLTPFQAGLTVLPLSLAFVVGSRVSGD
                     IVLGCLIQIAGLAAIGGTIAVWPSAGAVALVPSLALFGYGQGRVMAPLFGAVLANVAH
                     AHAGTGSGILTTTQQTANASGVALIGLIYFAVSGVGSSHAAMLAALAALTVLVVFAAL
                     SLRWMQRAA"
     gene            complement(611..1837)
                     /locus_tag="VHX39_14060"
     CDS             complement(611..1837)
                     /locus_tag="VHX39_14060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3992292.1"
                     /translation="MTASITRRAAIGTGLAATTLTRRARAARPPIRIGVLTDMAGVYA
                     ANTGPGSVVGAQLAVEDFLKTNPDFPVDVVSADLQLKPDVAMAISGQWLDTGGVDLIT
                     DVPLSSAAFAIGDLVKQKNKVAIFTGGASADITGAHCGPNHLHWVYDTWSMPHGVVDA
                     TVKEGGDTWFFITADYAFGHSLEKDAASFVTAAKGKVLGEALAPFPGTTDFSSFLVQA
                     KTSGAKVLGLANGGGDTVNCIKQASEFGLMKGGMKVAGLIFLIHDVHGVGLASAQGVM
                     LTEPFYWNMNDGTRAFAKRFAVKMPGNVPGSVHAGQYSAVTHYLKAVTKVGYDKAKAN
                     GLAVVDAMKAMPTKDPLFGDGQVRKDGRVIHKLYLFEVKSPEQSKEPWDYYNLKRTVP
                     ESEAFRPINLGGCSLV"
     gene            complement(1834..3254)
                     /locus_tag="VHX39_14065"
                     /pseudo
     CDS             complement(1834..3254)
                     /locus_tag="VHX39_14065"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
     gene            3165..3464
                     /locus_tag="VHX39_14070"
     CDS             3165..3464
                     /locus_tag="VHX39_14070"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HEX3992293.1"
                     /translation="MIHVLAVITTKPGKRAEVLAAFHANMPAVHAEAGCIEYGPVIDA
                     SNSPAKYGDDTFVVVEKWESPDHLKAHAASPHMAAYGAKTRDLLADRQIHIMQNG"
     gene            3522..>4548
                     /locus_tag="VHX39_14075"
     CDS             3522..>4548
                     /locus_tag="VHX39_14075"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3992294.1"
                     /translation="MDLSLSEEYQALQGEIRSFVATHGHKSPKLGGGRKRPDQKTLDW
                     QKTLLEHGYVGRTIPVEYGGAGKPPDVMEAAVIASEFAAANIYAGLTNQGVSMLVPTL
                     LELGTDEQKRAYVGPTIRGDIIWCQGYSEPGNGSDLANAQTKAELRDGFWVVNGQKIW
                     TSSAHYADMMFLLCRTEPDRPKHEGLSYLLLTMDSPGLDRRPLKTMTGRSEFNEVFFT
                     DVKVPENQIVAGRGKGWYVANVTLKHERSMIGNADKVTTRLEQLIKLLRATEIDGAPL
                     IRQAEFRDRLLRLQGEVIAWKAHNLRLLTEAAQGIDSGVKRMIVKYGGTMLGFRLSSL
                     AVDALGAQ"
BASE COUNT          902 a         1386 c         1368 g          892 t
ORIGIN      
        1 cagcgaacat atcgttctat ttcgtactga ccctgttctt gcaaaatggc ctgggactga
       61 cgccgtttca ggccggcctg accgtgctgc ccttgtcgct ggccttcgta gtgggttccc
      121 gcgtcagtgg agacattgta cttggctgct taattcagat cgccggcctt gccgccatcg
      181 gtgggacgat cgcggtgtgg ccttcggcag gagccgtcgc gttggtcccc tcgttggcgt
      241 tgttcggcta cggccagggc cgggtgatgg cgcctttgtt cggagccgta ctggccaatg
      301 ttgcccatgc ccacgccggc acaggttccg gtatcctcac aacaacgcaa caaaccgcta
      361 acgcgtccgg cgtcgcgctg atcggcctga tctactttgc ggtcagtggt gtcgggtcca
      421 gccacgcggc aatgctggcc gctttggccg cgctgactgt attggtggtg tttgctgccc
      481 tgtctttgcg ctggatgcag cgcgccgctt agccgcaagg ggccaccggg tcagggcccg
      541 gtgactgcct tgtgggtcga tgtcgatggg tcggcagcca atgccagttg gatgttcccc
      601 aaattgataa ttataccagc gaacatccac ccaaatttat cgggcggaac gcctcagact
      661 ccggaacggt ccgcttcaga ttgtagtagt cccagggctc cttggattgt tccggtgact
      721 tcacttcaaa cagatacagt ttgtgaatga ccctgccgtc cttgcgtacc tggccgtcgc
      781 cgaacaaggg gtccttggtc ggcatcgcct tcatcgcatc gaccactgcg agaccattgg
      841 ccttcgcctt atcgtagcca accttggtca ccgctttcag ataatgtgtg acggccgagt
      901 actggccggc atgcacagag ccaggaacgt tgcctggcat tttcactgcg aaacgtttcg
      961 cgaaagctcg tgttccgtca ttcatattcc aatagaaagg ctctgtcagc atcacgccct
     1021 gggctgacgc cagcccaaca ccatgcacgt cgtggatcag gaagatcagg ccggcgacct
     1081 tcatgccgcc cttcatcagg ccaaactccg acgcctgttt gatgcaattc accgtgtcgc
     1141 cgccgccgtt ggcgaggccc agtactttgg cgccactggt cttcgcctgc accaggaatg
     1201 aggaaaagtc cgtggtgccc ggaaacggcg ccagagcctc acccagcact ttgcctttgg
     1261 ccgcagtgac gaaactcgcg gcgtcctttt ccagggaatg tccgaacgca taatcggcgg
     1321 tgatgaagaa ccaggtgtcg ccgccttcct tgaccgtcgc atccaccacg ccgtgcggca
     1381 tcgaccaggt gtcatacacc cagtggaggt ggttgggccc gcaatgtgca ccggtgatat
     1441 ccgccgaagc tccgccggtg aatatcgcga ccttgttctt ttgctttacc agatcgccaa
     1501 tcgcgaaagc cgccgaggac aacggcacat cggtaatcag atccactccg ccggtatcca
     1561 gccactggcc ggagatcgcc atcgcgacat cgggtttgag ctgcaaatcg gccgaaacaa
     1621 catccacggg gaaatccggg ttggttttca gaaaatcctc caccgccagc tgcgcgccga
     1681 cgaccgagcc cggaccggta ttggcggcat aaaccccagc catgtcggtc aaaacgccga
     1741 tgcgaatcgg cgggcgtgct gccctcgccc gccgggtcag agtcgtggcc gcgagccccg
     1801 tgccaatcgc tgcgcggcgt gtgatggatg ctgtcatgct agggttcccc tgcttttcct
     1861 ggtctcaccg gtgacgagaa cgccagcctg gatcaacgtg tcgatctccg ggcgtgaata
     1921 gccgtgctcg gcgagaatcg ccacaccatg ctcgcctttc gatggcgcca ccgttcgcgg
     1981 cgagccatcc aggaacggcg gcatgccgat aagattcggc aacggaattg cctgcggcac
     2041 gtgcgggtga tgcgtccacg caacggcgcc gctctcggca acatgcggtt gctggagaaa
     2101 ttcggagtag gagttcagcg cctcatgcat gacacggtgc tcggaaagct ttgccgacca
     2161 ggccgcagtc gtatcggtcg tcagcaacgg ccgcagcacc gaatcaattt ccgcggcatg
     2221 cggctcgcgc ccgacggacg tgaggaaatg ttcgtttgca ccgagtgcgg gctcgtccac
     2281 ggccttgcaa taagcttccc actcccacgg ccgcacaacg gtgatggaca tgaatccgtc
     2341 cttggttcga taaacaccac tgggcggaat tccaggccgg tgacgccgcc ctccagatac
     2401 gacgacatca accgcaccac ctgcaatcca gctgccgcct gcataaggct ggaatcgata
     2461 tgtcggccac gcggctcgtg ctgacgtgca tgcaacgccg ccgcgacggc agagaatgag
     2521 aaaattgccg tgctcatatc gatcgaaatg aacgggatgc ggtgcgggat gccgtcctga
     2581 ccgcggttct ccgacatcat tccggtatag gcctgcagca ccggatccat tgccggccgc
     2641 tgcgccaacg gcccgttctg gccgaatccc gagacagaca aatacagaat gcgaggttcc
     2701 cgctccgcca ccgcgtcgta gccaaatccc aaacgttcaa tcacacccgg ccggaagcct
     2761 tgcacgaaga catctgcgcc gcggatcaaa cgccacagca cgtcacggcc ggtgtcctgc
     2821 ttcagatcca gtgcgatgga gcgtttgcca acattggacg ggatcgaata cgcggtgtga
     2881 tcgccgtatt tagtgccgag tccgcgggcc caatcaccgc cctcggtggg ctcgaccttg
     2941 atgacgttgg cgccgtactg ggcaagcatc atggcgcaat agggacctgc gacgccctgg
     3001 ctgacgtcaa tcactttcag gccggcgtag ggcgcctcgt agctcatgac ttcgtttcct
     3061 ccggcgtttg cggcaggata gcccacgcgc ggcgaatgcg cgaccagcgt gcgggcgcgt
     3121 ctgcgaaggc gtatccccac ggggcaaccc aaggagcaga tatcatgatt cacgtcctgg
     3181 ccgtcattac caccaaaccc ggcaagcgag ccgaagtgct ggcggcgttc catgccaaca
     3241 tgccggctgt acatgccgaa gccggctgca tcgaatacgg cccggtgatc gacgcgtcga
     3301 actcgccggc caagtacggc gacgacacgt tcgtcgtcgt cgagaagtgg gaaagtccgg
     3361 atcatttgaa ggcgcacgct gcctccccgc acatggcggc ctacggggcg aagacccgcg
     3421 acctgttggc ggatcgccag atccacatca tgcagaacgg ctgatgctct ggtgagggtg
     3481 gcgcccgcgc gccatcctca cgccggcaga aggagaagac gatggacctg agtctgtccg
     3541 aggaatacca ggcgttgcag ggggaaatcc gcagcttcgt tgcgacgcac ggccataaat
     3601 cgccaaagct tggtggcggc cgcaaacggc cggaccagaa gacgctggac tggcagaaga
     3661 cactgctgga acacggctat gtcggccgta ccattccggt cgaatatggc ggcgcgggaa
     3721 aaccccccga tgtcatggaa gctgccgtca tcgccagcga gttcgccgct gcgaacattt
     3781 atgccggcct caccaatcaa ggcgtttcga tgttggtacc gactttgctc gaactcggca
     3841 ccgacgagca gaaacgcgct tatgtcggcc cgaccattcg gggcgatatc atctggtgtc
     3901 agggttattc cgagcccggc aatggcagcg atctggccaa tgcgcagacg aaagcggaat
     3961 tgcgggacgg attctgggtg gtgaacggcc agaaaatctg gaccagttcc gcccattacg
     4021 ccgacatgat gttcttgctg tgccgcactg aacccgatcg gccgaaacat gaagggctgt
     4081 catatcttct gttgaccatg gatagtcccg gcctggatcg ccggccgttg aaaacgatga
     4141 cgggccgtag cgagttcaat gaagtgttct ttaccgacgt caaggtgccg gagaaccaga
     4201 ttgtggccgg gcgtgggaag ggttggtacg tcgcaaacgt cacgttgaag catgaacgct
     4261 ccatgatcgg caacgcggac aaggtgacga cgcgcctgga acagctgatc aaactgttgc
     4321 gtgcgactga gatcgatggc gctccactga tccggcaggc ggagtttcgt gaccggctgc
     4381 ttcgcctgca aggtgaagtg attgcctgga aagcacacaa tttgcgactt ctgaccgagg
     4441 cagcgcaggg gatcgattcc ggcgtaaaac ggatgatcgt taagtacggc gggacgatgt
     4501 tggggtttcg gttatcatcc ctggcggtgg atgcacttgg cgcacaag
//
LOCUS       DATAVD010000741         2583 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2301503, whole genome shotgun sequence.
ACCESSION   DATAVD010000741 DATAVD010000000
VERSION     DATAVD010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2583
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2301503"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            441..1826
                     /locus_tag="VHX39_14080"
     CDS             441..1826
                     /locus_tag="VHX39_14080"
                     /EC_number="1.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding glutamate synthase family protein"
                     /protein_id="HEX3992295.1"
                     /translation="MYVHDRRQVHHTILRNYPIIGYFRYFAETLGEYMRQYQYLPDWA
                     ERPFNRLERGWVYRSAKGVSNLRSFGSENVPAFVFRNAAFPVLDEEKQPYPGKQIGLS
                     EGPGACRQPYLAKTFFNISGMSYGALSPAAVLALSRGAKLAGIWMATGEGGLAPNHLA
                     GGCDVIMQMGTAKYGVRNPDGTLSEPKLREIAAHEQVRMFEVKLAQGAKPGKGGILPG
                     AKVTAEIAAIRGIPQGQDSISPNRHHDIGNVRELGQFIERVRGVTGKPVGVKFVAGDT
                     EFLEAWFEDCIIRPEGCPDYVQIDGGEGGTGAAPSALIDYVGLPITIALPMVAAARER
                     HKLEHRIRIIASAKLITPDKVAWALCMGADFVSSARGFMFSLGCIQAMKCGTGQCPTG
                     VTAANPRLIAGLDPTDKATRVAHYAMQVREEVEVIAHACGLTDPTGFRPKHVTEIERG
                     VGGFRAPQGSD"
     gene            complement(1831..2328)
                     /locus_tag="VHX39_14085"
     CDS             complement(1831..2328)
                     /locus_tag="VHX39_14085"
                     /inference="COORDINATES: protein motif:HMM:NF016045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity iron permease family protein"
                     /protein_id="HEX3992296.1"
                     /translation="MDDASHRNDRHASTDHFGNATFSAIAQWASRQCGRASTFIVACL
                     AIVIWAITGPIFAYSDTWQLVINTGTTIVTFLMVFLIQNTQNRDMSALQLKLDELIRV
                     NQDARNKLLDLEDLTEAELEQLKGTFSKLAGSPPDADRVPGTAADADQVDEDAEPARQ
                     PAATP"
BASE COUNT          449 a          837 c          831 g          466 t
ORIGIN      
        1 atgccggttg gtataacccg ggcaggcgga catcatcgtc cgtggcagtg ggatggaccg
       61 tccgttgacg ttgacccttg cgctattgtc atggccgggc gcctgattcg ggcgtcccgg
      121 ccatccgcgc ttcatcggcc ggtgcgcgaa aggccgggac acgcatagcg cgcgcccggt
      181 catgacggca tccgaaggtc gctatccgat cggcggccat gtcgatccgg tcgcggatca
      241 tggcagccct cgcgccgtgg acgtgttgtc cgacccggca tttgtccaaa atttgtaacg
      301 agaccacccc tggacaacgc gggccaacga ccgttaaccg ctcgtaaagg gccggattct
      361 atacacacgg cctgttccgg aggtgaacgc ccatgcttgc cctgatgttg ctcgcagtcg
      421 tcctgctggc tttggccggt ttgtacgtcc acgaccgccg gcaggtccat catacgatcc
      481 tgcgcaacta cccgatcatc ggctacttcc gctatttcgc cgaaacgctc ggcgaataca
      541 tgcgccaata ccagtatctg cccgactggg ccgaacgccc gttcaaccgc ctggaacgcg
      601 gctgggtgta tcgttccgcc aagggcgtat ccaacctgcg cagcttcggc agcgagaatg
      661 tcccggcctt cgtcttccgc aacgccgcct tcccggtgct ggatgaggaa aagcagccct
      721 atcccggcaa gcagatcggt ctcagcgaag gccccggcgc ctgccggcag ccctatctcg
      781 ccaaaacctt cttcaacatc agcggcatga gctatggcgc gctcagcccc gccgcggtgc
      841 tggcgctgtc gcgcggtgcc aagctcgcgg gcatctggat ggcaaccggt gagggcgggc
      901 tggcccccaa ccatctggcg ggcggctgcg acgtcatcat gcagatgggc acggcgaaat
      961 acggcgtgcg caaccccgac ggcacgctgt ccgaacccaa gctgcgggag atcgccgccc
     1021 acgagcaggt ccgcatgttc gaggtcaagc tggcccaggg cgcgaaaccc ggcaaaggcg
     1081 gcatcctgcc cggcgccaag gtcacggccg agatcgccgc catccgtggc atcccgcagg
     1141 gccaggacag tatcagcccc aaccgtcacc acgatatcgg caatgtccgc gaactcggcc
     1201 agttcatcga gcgtgtgcgc ggcgtcaccg gcaagcccgt cggtgtcaaa ttcgttgccg
     1261 gtgacaccga attcctcgaa gcgtggttcg aggactgcat catccgtccg gaaggctgcc
     1321 ccgactacgt gcagatcgat ggcggtgagg gcgggaccgg cgccgcgccc tccgcgctga
     1381 tcgactatgt cgggctgccg atcaccatcg cgctgcccat ggtcgccgcc gcaagggaac
     1441 gccacaagct ggagcaccgc atccgcatca ttgcctcagc gaagctgatc accccggaca
     1501 aggtggcctg ggcgctgtgc atgggggcgg atttcgtgtc ttcggcgcgc gggttcatgt
     1561 tcagcctggg ttgtatccag gcgatgaagt gcggcaccgg gcaatgtccg accggggtga
     1621 ccgccgccaa tccccgactg atcgccggtc tggatccgac cgacaaggcc acgcgggtcg
     1681 cacattatgc gatgcaggtg cgggaggagg tcgaagtcat cgcccatgcc tgcgggctga
     1741 ccgatcccac cgggttccgt ccgaagcatg tgacggaaat cgagcgcggg gtcggcggat
     1801 tccgagcgcc gcaggggagc gactgacgat ttacggcgtg gcggctggct gccgggccgg
     1861 ctcggcgtct tcgtcgacct gatccgcgtc cgccgctgtg cccggcaccc gatccgcgtc
     1921 gggtggggag cctgccagct tcgaaaacgt gcccttcagt tgctcgagtt ccgcctccgt
     1981 gaggtcttcc aggtccagca gcttgttccg ggcgtcctgg ttgacgcgga tcaactcgtc
     2041 aagtttcagt tgcagcgccg acatgtcgcg gttttgcgta ttctgaatga ggaagaccat
     2101 cagaaacgtg acgatcgtgg ttcccgtatt gataaccaac tgccaagtat cggaataggc
     2161 gaatattggt ccggtgatcg cccagatcac gatcgccagg caggcaacga tgaaggtgga
     2221 cgctcggccg cattggcggg acgcccattg ggcgatggct gaaaacgtcg cattgccaaa
     2281 atggtctgtg ctggcatgtc ggtcgtttcg gtggcttgcg tcgtccatgt ttgctcccaa
     2341 caggcgcatc tgaatcaaga aatgacgcgg cgtcattgca gaatcaagat ggccaggctt
     2401 caccgatgcg gcatgagcgc cgtcatcggt ctcgtcgcgg ggcgagcgct cgacgggtca
     2461 ggccgcggtt tgggcgccgc gcaccagccg tccgggcagg cggccggtgg atgcgccctc
     2521 ccggctgacg atctcgcctg aaagcacggt cgcgatgtag ccgtccgccc gctgcatcag
     2581 ccg
//
LOCUS       DATAVD010000742         5357 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1744446, whole genome shotgun sequence.
ACCESSION   DATAVD010000742 DATAVD010000000
VERSION     DATAVD010000742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5357
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1744446"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..449)
                     /locus_tag="VHX39_14090"
     CDS             complement(<1..449)
                     /locus_tag="VHX39_14090"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEX3992297.1"
                     /translation="MNSFGVARSPRSIHLGVGCRKALATIVRDLGQRAFICTDNRFGQ
                     DPMLSALADDMRAAGVAVEVYEDTIAELPLTCITAAAEKARAFGPDVIVGVGGGSCLD
                     IAKVVALLLAYPGALQDYYGEFKVPGPVLPIIAVPTTAGTGSEATPVA"
     gene            complement(461..1597)
                     /locus_tag="VHX39_14095"
     CDS             complement(461..1597)
                     /locus_tag="VHX39_14095"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEX3992298.1"
                     /translation="MRPYYPPRRERADPCSACAGAKSKHVHLIRISDTGREPLKVTVE
                     VELARATAVAALRLAGVPEGHAALQADLLVEAELRGRPSHGLLRLSRIIERIHNGVCD
                     PVTQGEHQWHGALLEVDGQDGLGPVVACAALDRLIGRVGESRVAIASIRRNNHLGMLA
                     WYGERVARRGMILIAMCTSEALVHPWGGRTAMLGTNPLAIAVPTAAEPFVLDMATSLV
                     SMGQIHDHANRGEPIPDHWALDAEGNRTTDATAAKSGAIAPFGEAKGYALGLALEVLV
                     TTLAASAVGRDVRGTLDSDQPCNKGDVFIVIDPLRGGETARTITAYLDAIRNTPGGQD
                     GQRAAVPGDRALRVRRDRLAQGIVLGSELWQRLQILAATAEPAD"
     gene            complement(1628..2800)
                     /locus_tag="VHX39_14100"
     CDS             complement(1628..2800)
                     /locus_tag="VHX39_14100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX3992299.1"
                     /translation="MVQDRISCEAVADLRIRSVEAFPISFRMPPDRVVRHGIGAAVKR
                     DTVLVKVATECGIIGWGEAHHGRGPTSIADLINNTLSHFLAGRTAAAPVDAWSAIYAR
                     HLASHGQGAGTMIALSGIDMALWDARGKYWGAPCWALMGGERKPIRAYAGGVSLGFQP
                     VESLIEEVASLVSANWRAVKLRFGDTVERDLSRLIAIRRAFPELTIMVDINCTYTMSE
                     IRRAAPVLLECGAFWLEEPFPAHDHRSYAEAKLILGGIPIAAGENHYGRFEFHRLVED
                     RSVAIFQPDLSKSGGPTEVLRIAHTAGAWKIPLCPHIATGGLNHAATVHLLSAVDNAG
                     WFEGDASPGNIFRDALCTIVPDADGSVFAPQGPGWGVDVDEDLIRRYPAISGPGFV"
     gene            2952..3887
                     /locus_tag="VHX39_14105"
     CDS             2952..3887
                     /locus_tag="VHX39_14105"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3992300.1"
                     /translation="MDLSALRIFICVGRLGSFSKASVALGVAQPTVSRVVGELERHFG
                     GPLFYRTGRGVTLTDMGETALLRAQALVREADQLIEDIHSFRCAPSGLVILGVLPSTV
                     TPLVADLHVKLLATFPNIRLRVLEGFSDQIERWLSEGVVDVGLPSHYRPGNRTEDDVL
                     LHANLVLVAGPDAPPLPEQIAFDAVARLPLVLAADPNGLRVLVEDVARRRGVSLNVAV
                     ETNSLAAQRDLVRRCGYYTIMAPEAVAADNPSGRLSTSAIVKPVLPRRVVLAVSRQRP
                     LSRASRAVLQTLKAVANQSLQAGAAPPENSVSERM"
     gene            3970..5226
                     /locus_tag="VHX39_14110"
     CDS             3970..5226
                     /locus_tag="VHX39_14110"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEX3992301.1"
                     /translation="MTLRLRIDAGTLAVRSRCFGARVQAKGGDVTFVWKGKSPVTGKQ
                     IFLTIGRRGKGDWGIDNARKRAAEYRDAVRLGRDPAAAREEAKQHVMSVSELCDAYVK
                     ALPTLLIRRAGRAKKESTIETDKSRIEAHIKPLLGKLLVPAVTPADVETFMQRVAAGA
                     TAKALEKGRGSAVKGGKGTASRTVGLLGAIFTYAMKRGLRPDNPVRGVVRFADAKRQR
                     RLSADEYKTLGEGLAQAVTDKVNPYGVAALQFLALSGWRRGEVVNLKWTDIDSVRRTA
                     TLGDTKTGRSIRPLAHAALNTIKELPRRSGNAHVFPASTGEGAMTNLPRIWNALREQA
                     GLPADVTPHVLRHSVASLASDAGLSEATIAGLLGHKLGTITSRYTHSADAVMLKAADT
                     VADMVLDLMGQKTGRADNVTQLTVKA"
BASE COUNT         1044 a         1657 c         1660 g          996 t
ORIGIN      
        1 gcgaccggtg tcgcctccga tccggtgccg gcggtggtgg gtaccgcgat gattggcagt
       61 accggcccag gcactttgaa ttcgccgtaa tagtcttgca aagcccccgg ataggctaga
      121 aggagcgcga cgactttggc gatgtcgagg caactgccgc cgccgacgcc gacaatgaca
      181 tccggaccaa aggcacgtgc tttctcagcc gccgccgtga tgcaggtcag cggcaattcg
      241 gcgatcgtat cctcatagac ctctacggcg acgccggccg cccgcatgtc gtcggcgagc
      301 gcgctcaaca tcgggtcctg gccgaagcga ttatccgtgc agatgaaggc gcgctggccg
      361 agatcacgca cgatggtcgc cagcgccttg cggcagccga cgcccagatg gatcgatcgt
      421 ggcgagcgag cgacgccgaa tgaattcatt tgttcctcct ttagtcagct ggttccgcgg
      481 tggcggccag aatttgcaga cgttgccaaa gctcgctgcc cagcacgatc ccttgagcca
      541 gccggtcgcg gcgcacgcgc agggcgcgat cccctggcac cgcggcccgc tggccatctt
      601 gtcccccggg cgtgttgcga atggcatcga gataggcggt gatggtgcgc gctgtctcgc
      661 cgcctcttaa agggtcgatg acgatgaaca cgtcgccttt gttgcagggt tgatcagaat
      721 cgagcgtccc cctgacatcg cggccgacag cggaggcggc gagcgtagtg accagcactt
      781 ccagcgccag tccgagagca tagcccttgg cctcgccgaa aggcgcgatc gcgcccgatt
      841 tggcggcggt tgcgtcggtg gtgcggttgc cctcagcatc cagcgcccaa tggtccggga
      901 tgggttcgcc acgattggcg tgatcgtgga tctgccccat ggaaaccaag ctggtagcca
      961 tgtccagaac gaagggctcc gccgccgtcg gcaccgcgat ggcgagtgga ttggtgccga
     1021 gcatggcggt gcggccgccc caggggtgca cgagcgcctc gctggtgcac atcgcgatca
     1081 ggatcatccc gcgacgtgcg acgcgctcgc cgtaccaggc caacatgccg aggtgattgt
     1141 tgcggcgaat ggaggcgatc gcgacgcggc tttcgccgac acggccaatc aggcggtcga
     1201 gggcagcgca ggccacgacc ggcccaagcc catcctggcc atcaacctca agcaacgcgc
     1261 cgtgccactg gtgctcaccc tgcgtcactg gatcgcaaac gccgttgtga atacgctcga
     1321 taatccggct gagccgcaac aacccgtgcg aaggccggcc gcgcaactcc gcctccacca
     1381 gcaggtcggc ttgcagggcc gcatggccct ccggtacgcc cgccaaacgc aaagccgcga
     1441 ccgccgtcgc cctggccagt tcaacttcaa ccgttacttt cagcggttct ctcccagtat
     1501 ctgaaattcg gatgagatgg acatgctttg atttcgcccc cgcgcacgcg ctgcaggggt
     1561 cggcacgctc gcggcgtggc gggtaataag gacgcatctt ttccggccgc cgttcatcct
     1621 ggcgtactca aacgaagcct ggcccggaaa tcgccggata gcgtcggatc aggtcctcgt
     1681 cgacgtctac gccccaccct ggcccttgcg gggcaaaaac cgaaccgtcg gcatcaggta
     1741 cgatggtaca cagggcgtca cggaatatat tgcctgggga cgcatcgcct tcgaaccatc
     1801 cggcattatc gaccgccgat aggagatgaa cggttgcggc gtggttgagt ccacccgttg
     1861 cgatgtgcgg acagagtggg atcttccagg cccctgccgt gtgcgcgatt cgcagcactt
     1921 ctgtcgggcc gccagacttc gacagatccg gctggaaaat agcgacgctg cggtcttcca
     1981 ccagacggtg gaattcgaag cggccatagt ggttctcgcc tgcggcaatg ggaataccac
     2041 cgagaattaa cttagcttct gcataggagc ggtgatcgtg cgcggggaag ggctcttcca
     2101 gccagaacgc tccgcactcg aggaggaccg gcgccgcccg tctgatctcg gacatcgtat
     2161 aagtacaatt tatatccacc atgatggtga gctcaggaaa tgcccgacgt atcgcgatca
     2221 gccgtgagag gtcacgctcc acggtatcgc cgaagcgcaa ctttactgcg cgccagttcg
     2281 ccgaaaccag cgaagccact tcttctatca agctctcgac aggctgaaat cccaatgaca
     2341 caccgccggc ataggcacgg atcggcttcc gttcaccgcc catcagggcc cagcagggcg
     2401 caccccaata tttaccgcgg gcatcccaaa gcgccatgtc gattccggac aaggcgatca
     2461 tggtacccgc gccctggccg tggctggcaa ggtgacgcgc atagatggca ctccacgcat
     2521 ccacaggggc cgctgcggtt cgacccgcga gaaaatgcga cagggtattg ttgatgaggt
     2581 cggcgatcga ggtggggcca cggccatgat gcgcttcgcc ccacccgatg atgccgcatt
     2641 cggtggcgac tttcaccaag acagtatcac gttttactgc cgcaccgatg ccgtgcctga
     2701 cgacccgatc cggcggcatg cggaacgaaa tcggaaacgc ttcgacagat cgaatccgca
     2761 agtccgccac agcttcgcag cttatcctgt cctgaaccaa cggttcatat cctccaagtt
     2821 ttcattgcct taccgaagat tcaagatgtt tgaaccgtag cgggcgatga ttttatccat
     2881 ccctaaaggc tggcgcagcc atcggctagg cgcatatagt tgatgtcaga tatagaaaag
     2941 gtggatagga cgtggatctc agcgcgctca ggatttttat ctgtgtcggc aggctaggca
     3001 gcttcagcaa ggccagcgtc gctctgggcg tcgcacagcc gactgtcagc cgtgttgtcg
     3061 gcgagctgga acgacatttt ggcggaccgc tgttttatcg cacgggccgc ggcgttacgc
     3121 ttaccgatat gggggagacc gcgctccttc gcgcgcaggc gctggtacgc gaggccgacc
     3181 aactgataga ggatattcat tcctttcgct gcgcgccgtc tggtctcgtc atcctcggcg
     3241 tgctgccctc tacggtgacg ccattagtgg ctgacctcca tgtcaagctg ctcgctacct
     3301 tcccaaatat ccggttgcgc gtcctggagg gcttcagtga tcagatcgag cgatggctct
     3361 cggagggcgt cgtcgatgtc gggttgccta gccattaccg cccgggcaac cggactgagg
     3421 atgatgtgct gctgcatgcc aatctggtct tggttgcagg ccccgatgcg ccaccgcttc
     3481 cagagcaaat cgcgtttgat gccgtggcgc ggttgccgct tgtgctggcg gccgatccaa
     3541 atggtttgcg cgttctggtg gaggatgttg cccgtcgccg tggcgtctcc ttgaatgtcg
     3601 ccgtggaaac aaattccctt gcggcgcaga gagatcttgt ccgccgctgc ggctactaca
     3661 ccattatggc gccagaggcg gttgccgcgg acaatccgag cggacgattg tcaacgagcg
     3721 ccatcgtaaa gccggttctg ccgcgccgcg tggtgctggc cgtcagccgg caacggccgc
     3781 taagccgcgc cagtagagcc gtgctgcaga cattgaaagc ggtggcaaac cagtctctgc
     3841 aagccggagc agctccgccc gaaaacagcg tttccgagcg gatgtagaca aagcaaagtc
     3901 aatagccgga tatacgcggc agggagcttt ccgctgcgag ccgattgatt gttccgaaat
     3961 agccgataca tgacgttgcg acttcgtata gacgccggca cgctggcagt ccgaagtcgc
     4021 tgctttggcg cgcgggtcca ggccaagggc ggcgacgtga ccttcgtgtg gaagggcaag
     4081 agcccggtca ctggcaagca gatctttctg accatcggcc ggcgcggcaa gggcgattgg
     4141 ggcatagaca atgcccgcaa acgtgccgcg gaataccggg atgccgttcg cctgggacgt
     4201 gatccagccg ccgcccgtga ggaagccaaa cagcacgtaa tgtcagtttc tgaactgtgt
     4261 gacgcctatg tgaaggcact gccgacactg cttattaggc gcgccgggcg cgccaaaaag
     4321 gaatctacca tcgagacgga caagagccgg atcgaagcgc atatcaaacc gcttctgggc
     4381 aaacttctgg ttccagccgt gacgcccgct gacgtggaaa cgttcatgca gcgtgttgcc
     4441 gcaggagcta cggccaaagc tctagaaaaa ggccggggaa gtgcggtgaa gggcggcaag
     4501 ggtacggcca gccgtacagt gggcctgctc ggggcgattt tcacttatgc catgaagcgc
     4561 ggccttcgac cggataaccc cgtccgcggc gtggttcggt tcgctgatgc caagcgccag
     4621 cggcgtttat cggctgatga gtataagact cttggggagg gtttggctca agccgtgacc
     4681 gataaggtga acccttacgg cgtagcggcc cttcagttcc tcgcgctgtc aggctggcgc
     4741 cgcggcgagg tcgttaacct caaatggacc gacatcgaca gcgtccgacg cacagccacg
     4801 ctgggcgaca ccaaaacagg taggtcgata cggcccctcg cccacgcagc gctgaatacg
     4861 atcaaggagc tgccgcgccg ctctggcaat gctcatgtct tccccgcctc gacaggcgaa
     4921 ggagccatga ccaacctccc ccgcatttgg aatgctctcc gggagcaggc cggcttgccg
     4981 gcggacgtca cgccccatgt gctgcgtcat agcgtagcct ccctggcgag cgacgccggt
     5041 cttagcgagg ccacgatcgc cggattgctg gggcataagc tgggcacgat caccagccgc
     5101 tacacccact ccgctgatgc tgtgatgctc aaggcggcgg ataccgtcgc tgacatggtg
     5161 ctggacctta tggggcagaa aacggggcgt gcggacaacg tgacgcaact gacggtcaaa
     5221 gcataaaatc agcatttgca gccccacccc acctaaacca cctaaatcac ctaatcgggc
     5281 gtgagccgta acagggttgg gctaagcgcc tctctggccc ggttggcgga tgccgtcgcg
     5341 gcgcattgag gacactc
//
LOCUS       DATAVD010000743         3804 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_256029, whole genome shotgun sequence.
ACCESSION   DATAVD010000743 DATAVD010000000
VERSION     DATAVD010000743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3804
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_256029"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..101
                     /locus_tag="VHX39_14115"
     CDS             <1..101
                     /locus_tag="VHX39_14115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1732 domain-containing protein"
                     /protein_id="HEX3992302.1"
                     /translation="LCSKSATPALTSTGLKLKAAIEQLREQVQNIE"
     gene            98..727
                     /gene="gmk"
                     /locus_tag="VHX39_14120"
     CDS             98..727
                     /gene="gmk"
                     /locus_tag="VHX39_14120"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018308252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEX3992303.1"
                     /translation="MIEIARRGVCLVLSAPSGAGKTAIADALLASEPALERSISVTTR
                     ARRPQEVDGVHYHFLTEDAFQQALRDDTLLEWARVLQGTHAYGTPRAPVETALAAGRD
                     VVFDIDWQGHQQLRAKLPADVVSVFVLPPNVAALRSRLVGRAGDGGEEIERRMRVATE
                     EIRHWVEFDHVVVNEDLAVATEVVRGVLHGARSKIGRLTGLPAFVEGLR"
     gene            807..1769
                     /locus_tag="VHX39_14125"
     CDS             807..1769
                     /locus_tag="VHX39_14125"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEX3992304.1"
                     /translation="MNDALPLGESPLRSIDAVELGLGEAGYIANRQISTAIYMAHHLQ
                     KPILVEGPAGVGKTELAKSVASWLKLPLIRMQCYEGLDESKALYEWKYGKQLLYTQIL
                     KDKINSVIGESDDLATALNKLHSFGDVFFSHQFLEPRPLLRSLQEPGGSVLLIDEIDK
                     SDQEFEAFLLEILSDYQVTIPEIGTVGAIVPPIVLLTSNSTRDLGDALKRRCLHLHIG
                     FPDDRLEAKIIASRVPGIDARLLKQLVSFVQQLRALDLKKVPSVSETIDWAKIMLLLH
                     TSVLEVDLVRDTLNVLLKFEADIEAAGKQIAGLTHKARQDAGVA"
     gene            1769..3172
                     /locus_tag="VHX39_14130"
     CDS             1769..3172
                     /locus_tag="VHX39_14130"
                     /inference="COORDINATES: protein motif:HMM:NF017569.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX3992305.1"
                     /translation="MATAAPASEPLRRFLQVARGAGLKVSAAEGIDAARAVDLVGFED
                     REVLRDSLGLVLAKTPEEKAAYEEVFDLYFKRDEFAGGSDEAQAESADSERDPFSSPS
                     NGSGGDGMGGQGGQSLGSLLASDDRATLATAMEQAARESGIENIRFFTQKNLYARRIL
                     DRMGLRALERDMEAMRQTGTPEGLGRALFLDGRVEALRDSVRDFVERNLLLFAKGDTE
                     KFREELLKSARLSNLERRDLDRMRVLVRQMAKKLAARYAKTRRRRLRGQLDTRRTLRR
                     NMGWGGIPFITVWKQKRIEKPRVMVLCDVSGSVAAMAQFLLMFMYAINEALSDIRSFA
                     FAGSLIEVSEILEKEPVEEAITKIMSLIGFGSSNYGNSFADFEDGWMNHVTNKTTVII
                     LGDARGNRTDPRTDVVGRLSQRSKRIIWLNPEYRSAWGTGDSDMYRYAPFCNLVTVCN
                     TLRHLERAITDILEDAT"
     gene            3185..>3804
                     /gene="mtgA"
                     /locus_tag="VHX39_14135"
     CDS             3185..>3804
                     /gene="mtgA"
                     /locus_tag="VHX39_14135"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HEX3992306.1"
                     /translation="MATPPEPEKRRRVRRFAGRAVLLLLAVPLLLILLFGFVPPPITP
                     LMLVRLAEGYGLHHEWVPFSRISPYLKEAVVASEDNLFCREAFGFDTAALEGQIAIWR
                     EGERPRGASTITMQTVRNLLLWPGRDFVRKAIEAWLTPQFALLWPKRRVLEVYLNIIE
                     FGPGIYGAEAASQRFFGRSAATLTRDEAVRLAVVLPDPLHWSAARP"
BASE COUNT          678 a         1032 c         1359 g          735 t
ORIGIN      
        1 cgctgtgcag caagtcggcg acgccggcgt tgacctcgac cgggttgaag ctgaaggccg
       61 cgatcgagca attgcgtgag caggtgcaga acatcgaatg atcgaaatcg cgcgccgcgg
      121 ggtctgtctg gttctgtcgg caccgtcggg ggccggaaaa acagcgatcg cggatgcgct
      181 gctggcgagc gagccggcac tggagcggtc aatcagcgta acaacgaggg ctcggcggcc
      241 gcaggaagtt gacggtgtcc actatcattt cttgacggag gacgcgttcc agcaggccct
      301 gcgtgacgat acgttactgg aatgggctcg ggttttgcaa ggcacgcacg cctatgggac
      361 gccgcgagcg ccggtggaaa cggcgttggc cgcggggcgt gacgtggtgt tcgacatcga
      421 ttggcagggg catcagcagt tgcgggcgaa attgccggcg gatgtggtca gcgtgttcgt
      481 gctgccgccg aatgtggcgg cgctgcggtc caggctggtg ggccgagcgg gggacggcgg
      541 cgaggagatc gagcggcgga tgcgggtggc gacggaggaa atccgtcact gggtggaatt
      601 cgaccacgtg gtggtgaacg aagacctggc ggtggccacc gaggtggtgc gcggggtgct
      661 gcatggcgcc aggagcaaga tcgggcggtt gaccgggctg ccggcgtttg tcgaggggtt
      721 gcgttagggg aacggggtag cgccccggtt tgacattcct gcccagcgat gcgatcgggt
      781 tactgcacag tagcttggag ttgcacgtga acgatgcgct gccgctgggg gagtcgcccc
      841 tgcgatcgat cgacgctgtc gaactgggtc tgggtgaggc cgggtatatc gccaaccgtc
      901 agatctcgac cgcgatctat atggcgcatc acctgcagaa gcccatcctg gtggaggggc
      961 ccgctggcgt cggcaagacc gaactggcga agtcggtggc gtcctggctg aaactgccgc
     1021 taatccgcat gcagtgctac gaaggtctgg acgagtccaa ggcgctgtat gagtggaaat
     1081 acggcaagca gttgctgtac acgcagattc tgaaggacaa gatcaactcg gtgatcggtg
     1141 agtccgatga cctggccacc gcgttgaaca agctgcattc ctttggggat gttttctttt
     1201 cgcatcagtt cctggagccg cggccgttgc tgcggtcgtt gcaggaaccc ggtggctcgg
     1261 tgctgctgat cgacgagatc gacaagtcgg accaggagtt cgaggcgttc ctgctggaga
     1321 tcctgtcgga ctaccaggtg acgatccccg aaatcggcac ggtgggcgcg atcgtgccgc
     1381 cgatcgtgct gctgacgtcg aacagcaccc gcgatctggg ggatgcgctg aaacggcgct
     1441 gcctgcatct gcatatcggt tttccggatg acaggttgga ggcgaagatc atcgcctccc
     1501 gcgtgccggg gatcgatgcg cggttgctga agcagcttgt gagtttcgtg cagcagcttc
     1561 gggcgctgga cctgaagaag gtgccgtcgg tcagcgaaac gatcgattgg gcgaagatca
     1621 tgctgctgct gcacacctcc gtgctggagg tcgatctggt gcgcgacacg ctgaatgtgc
     1681 tgctgaagtt cgaggcggat atcgaagccg cgggcaagca gatcgccggg ctgacgcaca
     1741 aggcgaggca ggacgcgggg gtcgcgtagt ggcgacggcg gcgcccgcca gtgaaccgct
     1801 gcggcgcttc ctgcaggtcg cgcgtggtgc cgggctgaag gtgtccgcgg ccgaggggat
     1861 tgatgccgcg cgcgcggtcg atctggttgg tttcgaggac cgggaggtgt tgcgggactc
     1921 gcttggcctg gtgctggcga agacgcccga ggaaaaggct gcgtacgagg aggttttcga
     1981 cctttatttc aagcgtgacg aattcgccgg cggtagcgat gaggcccagg cggaatcggc
     2041 ggattccgag cgggatccgt tttcgagtcc gtccaacgga tcgggcggtg acggcatggg
     2101 gggccagggc gggcagtcgc ttgggtcgct gctggcgtcg gacgaccggg caacgctggc
     2161 cacggcgatg gagcaggcgg cgcgcgagtc cgggatcgag aatatccggt ttttcacaca
     2221 gaaaaatctt tacgcccgtc gtatcctgga tcgcatgggc ctgcgtgcgc tggaacgcga
     2281 catggaagcg atgcggcaga ccggcactcc ggaagggttg ggccgagcgc tgttcctgga
     2341 cgggagggtg gaggcactga gggattcggt tcgtgacttt gtcgaacgga atctgctgct
     2401 gttcgccaaa ggcgataccg aaaaattccg cgaggaactg ctgaaatccg ctcggctttc
     2461 caacctggag cggcgcgatc tcgaccggat gcgtgtgctg gtgcggcaga tggcaaagaa
     2521 gctggcggcg cgctatgcca agacgaggcg gcgacggttg cgcgggcaac tcgacacgcg
     2581 gcggacgctg cggcgaaaca tgggttgggg cggcattcca ttcatcacgg tatggaaaca
     2641 gaagcgcatc gaaaagccgc gggtgatggt gctgtgcgac gtatccgggt cggtcgcggc
     2701 gatggcgcag ttcctgctga tgttcatgta cgcgatcaat gaggcgctgt cggatattcg
     2761 gtcgtttgcg ttcgccgggt cattgatcga ggtatccgag attctggaga aggagccggt
     2821 tgaggaggcc attaccaaga tcatgtcgct gatcgggttc gggtcctcga actacggcaa
     2881 ctcgttcgcc gatttcgaag atggctggat gaatcacgtt accaacaaga cgaccgtgat
     2941 cattcttggc gatgcgcgcg gtaatcgcac cgatccgcgg acggatgtcg tcggacgttt
     3001 gtcgcagcga tcgaaacgga tcatctggct gaacccggaa taccggtcgg cctggggaac
     3061 cggtgattcc gacatgtatc ggtatgcgcc gttctgcaac ctagtgacgg tgtgcaatac
     3121 attgcggcac ctggaacggg cgattacgga tattctggag gatgcgacct agacgaacct
     3181 gctaatggct acgccccccg aacctgagaa gaggcgccgt gtcaggcgct tcgccggccg
     3241 cgccgtgctg ttgctgctgg ctgttccgct tttactgatc ctgctgtttg gtttcgttcc
     3301 gccgccgatc actccgctga tgctggtgcg cctggccgag ggctacggcc tgcaccatga
     3361 atgggtgcct ttcagcagaa tcagccccta tcttaaggag gcagtggtcg catccgaaga
     3421 caatctgttc tgccgtgaag catttggctt cgataccgct gcgctggagg gccagatcgc
     3481 catctggcgt gaaggcgaac ggccccgcgg cgccagcacg atcaccatgc agaccgtgcg
     3541 caacctgctg ttgtggcccg gccgcgactt tgtgcgcaaa gcgatcgaag cgtggctgac
     3601 accccagttc gccttgctgt ggcccaagcg acgcgtgctg gaggtctatc tcaacatcat
     3661 cgaattcggc cccgggatat acggcgccga agccgcgtca cagcggtttt ttggccgttc
     3721 ggcggcgacc ctgacccggg acgaagcggt tcgtctcgcc gtggtcctgc cggacccgct
     3781 gcactggtcc gccgcgcgtc ccag
//
LOCUS       DATAVD010000744         1582 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2675782, whole genome shotgun sequence.
ACCESSION   DATAVD010000744 DATAVD010000000
VERSION     DATAVD010000744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2675782"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..469
                     /locus_tag="VHX39_14140"
     CDS             <1..469
                     /locus_tag="VHX39_14140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992307.1"
                     /translation="EFKTLSAWLDKSLQESWHAANRQRGQRIQLRVPVKVSGYSDQGT
                     RFTEESQTSEINPFGGSVLLAAQVKEGQRLVLSHAQTKAAVECLVVSSKQMEGKKSLV
                     GLAFISPNPQFWLVSFPPTKQSQPRPDTIHRAPQAAAQVQSQELGELELCLQA"
     gene            993..>1582
                     /locus_tag="VHX39_14145"
     CDS             993..>1582
                     /locus_tag="VHX39_14145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992308.1"
                     /translation="MRVEDIVDRVVSRFIGTKHERDVKRLTPTVSAINALAADYERLS
                     DSEILEKSLQLRAEVQKRLGTADPQEDGYKQRLADALEPAVVPGFALVREVGRRTLGM
                     RHFDVQLIGGIVLHEGKIAEMKTGEGKTLVATLPAFLNSLAGRGVHIVTVNDYLARRD
                     AEWMAPIYRSLGLTVGVIVHDLDDAQRRAAYGSDIT"
BASE COUNT          355 a          499 c          437 g          291 t
ORIGIN      
        1 agagttcaag accctctcgg cctggctcga taaatcgctg caagaatcgt ggcacgcggc
       61 caatcgccaa agaggccagc gcatccagct gcgcgttcca gtgaaggtat ccggatacag
      121 cgatcaagga acgcgtttca cggaagaaag tcagacttcg gaaatcaacc cattcggagg
      181 atcggtcctt ctcgcagccc aagtgaagga agggcagcgc ctcgtgctgt cccatgccca
      241 aaccaaggcc gccgtggaat gcctggtcgt gtcgagcaaa caaatggaag gcaaaaagag
      301 cctcgtgggc cttgcattca tctcccccaa tccgcaattc tggctggttt cgtttccgcc
      361 cacgaagcag tcgcagccgc gtcccgatac aatacaccgg gcgcctcagg cggcagcgca
      421 agtccaatcc caggaattgg gagaactcga gctttgcctc caagcgtaat aggtcaacgt
      481 tagcgggaat gcgtcgaaaa taacgatcgt ctgagctacg tggaccatct aaaaacggta
      541 aaatcgacca cgtatttgtg ttgcgtcttc ctttgaaatc ccgaaatcca ttttcaaata
      601 aaagcgatct tccctttcgt ttcaggtcgg ccgcgattcc acaccgctta ccacggcctt
      661 gacgcgacag catgcgccac ccctttaccg tgctcgcacc cgaagcggtc gagtcgccgt
      721 aacgaaccgc aacgataatc aggctgcccg ccccataggg agttcgatca tcgcccacaa
      781 acatcttcac ccggcacttc ctttgcgccc gatggcgcac gcgggctata attccgtgtt
      841 gcagagccat cggaagcagt cctatcgctc cggaatccag attcagcatc ggggcctccc
      901 ggggtctgcg gggaacgcct gcacggcgta ggaacggacg gccccgtcgg ctgaagcgta
      961 gccatggtcg ggagcatcca accaaggaca gcatgcgagt cgaagacatc gtcgaccggg
     1021 tcgtatcccg gtttatcggc accaaacacg agcgggacgt aaagcgcctg acccccacgg
     1081 tctcggccat caacgcgctg gcggctgact acgagcgcct gtccgattcc gaaattctcg
     1141 aaaaatccct ccaacttagg gcggaagtcc agaaacgtct ggggactgcc gatccgcagg
     1201 aggacggata caagcagcgc ctcgccgacg cgctggaacc ggccgtagtg cctgggtttg
     1261 ctcttgttcg cgaagtaggc cgccgtaccc tcggaatgcg ccacttcgac gtccaactga
     1321 tcggcggtat cgtcctgcac gaaggcaaaa tcgccgagat gaagaccggc gaaggcaaga
     1381 cgcttgtcgc cacgcttccg gctttcctga attcgctggc aggccggggc gtgcacatcg
     1441 tcaccgtaaa cgattacctg gcccgccgcg acgcagagtg gatggccccg atctaccgct
     1501 cgctaggcct cactgtcggt gtgatcgtgc acgacctcga cgacgcgcaa cgtcgcgcgg
     1561 cctacggctc cgacattact ta
//
LOCUS       DATAVD010000745         1690 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2491961, whole genome shotgun sequence.
ACCESSION   DATAVD010000745 DATAVD010000000
VERSION     DATAVD010000745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2491961"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            229..999
                     /locus_tag="VHX39_14150"
     CDS             229..999
                     /locus_tag="VHX39_14150"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992309.1"
                     /translation="MTSSLELQTMRKVAWRLVPMVSLAYLINVLDRFNISFAALTMNK
                     ALGLSATAYGLGAGAFFWSYVLFQVPANIVMARLGARRWIMIIMLFWGLCATCAALIN
                     GTVSFVIIRFFLGVAEAGFFPGVAFFMTRWFPSGHRGRAMGAFYATGASAGIIGGPIA
                     ANLLQLNGLFGIAGWQWIFLAEGAPAVALAIACPLLLRDRPSEAAWLKPDERAWLERT
                     LEEEQQVAQGGHLPFMKAIVTPTIVLLMLVYLLVGFGV"
     gene            complement(1219..>1690)
                     /locus_tag="VHX39_14155"
     CDS             complement(1219..>1690)
                     /locus_tag="VHX39_14155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992310.1"
                     /translation="VMFFPDKAASFQEIARVLRHGGSYVFIVWDDWAQMEHAPLAMAA
                     DVVSEILGCEPRSLVNPPYHDEATIRADLATARFEQIGIRRVTQPARAASAHAAAVAT
                     VHGSLIRTVIESRAPERLQEATNAVEQAFRARYGGGEIGGSTKGLVIAAEKPTA"
BASE COUNT          312 a          528 c          502 g          348 t
ORIGIN      
        1 gtccagttcg atatgcggca gatccaaccg ccgcgcgagc gtccgtgcca gcgtggtctt
       61 gccggcgccg gaggttccga tcaccacgat ccgcatccca gcgcccccga aaacgatgca
      121 attaagcaag gaacctcgca ggtcaccaca accgctattg tgaaccccgc cgtctggccc
      181 ctatcgtcct tgcccaaggg caacatagcc cgcaagacgg agggtcacat gacgtccagt
      241 ctggaactcc agacgatgcg caaggtcgcg tggcggctcg tcccgatggt gagcctcgct
      301 tacctgatca acgtgctcga ccggttcaat atttcattcg cggcgctgac catgaacaag
      361 gcgcttggct tgtccgcaac cgcttatggg cttggtgcgg gcgcattctt ctggagctac
      421 gtactgttcc aggtgccggc gaacattgtc atggcgcggc tcggcgcgcg acgctggatc
      481 atgatcatca tgctgttctg gggtctctgt gcgacctgcg cggcactgat caacggcacc
      541 gtcagcttcg tgatcatccg ctttttcctt ggtgttgccg aagcgggctt ctttcctggc
      601 gtcgcattct tcatgacgcg ctggttcccc tccggccatc gcggccgcgc catgggcgca
      661 ttttacgcca ccggcgcctc tgccggcatc atcggcggcc cgatcgcggc caacctgctg
      721 caattgaacg gtctgttcgg catcgccggc tggcagtgga tcttcctggc cgagggcgcg
      781 ccggctgtgg cgctggccat tgcctgtccg ctgttgctgc gcgaccgccc atccgaggca
      841 gcctggctaa agcccgacga acgcgcctgg cttgagcgca cgctcgagga ggagcagcaa
      901 gtggcgcaag gcggccacct gccgttcatg aaggcgatcg tcacgccgac catcgtgctg
      961 ctaatgctgg tctacctgct ggtcgggttc ggcgtttagg ggtcaccaga cgatttgttc
     1021 aaaatcgtac ggtaagagag gaaacaagcc gagaacgcca gccattgcgc aaaccgattg
     1081 cctttgagtc cggatttgca agaggattgt gaaagcgaaa atcggcggaa atccgtcgct
     1141 tggccaatcc atacgcaaac ggtcgtttac gaaagactgt ccggccgcag ctaatcgtcg
     1201 aaacatgaag ccccaagatc aggcggtagg cttttccgca gcaatgacga gtcccttggt
     1261 ggagccgccg atttctccgc caccataccg ggcgcgaaac gcctgttcca cagcgttggt
     1321 cgcctcttgc agtcgctcgg gggctctcga ctcgatcact gttcggatca gagatccgtg
     1381 tacggtggcc acagccgccg cgtgcgccga cgccgccctc gccggttggg tgacgcgtcg
     1441 aatgccaatt tgttcgaaac gtgccgtcgc cagatccgcc ctgatggtgg cttcgtcgtg
     1501 ataaggcggg ttcaccagag atcgtggctc gcatcccagt atctcgctga cgacatcagc
     1561 tgccatggcc agtggtgcat gttccatctg agcccagtcg tcccagacga tgaagacata
     1621 tgagccacca tgccgtaata cgcgggctat ttcctgaaag gacgcggctt tgtctggaaa
     1681 gaacatgacg
//
LOCUS       DATAVD010000746         3452 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2491977, whole genome shotgun sequence.
ACCESSION   DATAVD010000746 DATAVD010000000
VERSION     DATAVD010000746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3452
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2491977"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..434)
                     /locus_tag="VHX39_14160"
     CDS             complement(<1..434)
                     /locus_tag="VHX39_14160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEX3992311.1"
                     /translation="MSASLTSLAYLVAAVLFILALRGLSSPVTSRSGNRFGMIGMAVA
                     IIATLLHHDMSLGGFGLIALGLVIGGSTGVVVALRIQMTALPQLVAAFHSLVGLAAVF
                     VAAAALNAPEAFGIGVPGAIRTQSLVEMSLGLGIGAITFSGSL"
     gene            complement(444..836)
                     /locus_tag="VHX39_14165"
     CDS             complement(444..836)
                     /locus_tag="VHX39_14165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-translocating transhydrogenase family
                     protein"
                     /protein_id="HEX3992312.1"
                     /translation="MDPSQIADEARRLAEQANALAMHAQSITGTIGQVAPVVEPFIYL
                     LAVFLMACFVGYYVVWNVTPALHSPLMAVTNAISSVIIVGAMLATGLGTSWWSVAFGF
                     IAVTLASVNIFGGFLVTQRMLSMFKRKQ"
     gene            complement(853..1989)
                     /locus_tag="VHX39_14170"
     CDS             complement(853..1989)
                     /locus_tag="VHX39_14170"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEX3992313.1"
                     /translation="MRLAVLKERRVPEARVAATPDTVKRLIGLGLTVAIETGAGAQTS
                     IPDAEFAAAGAEIAADPASALAGAGVVLSVQAPLPEERALIERGALLICIAGAFADAE
                     LVPSLAAAGIDTAAMELLPRITRAQSMDVLSSQANLAGYRAVIEGAYAFQRGFPMMMT
                     AAGTVPPARVFIIGAGVAGLQAIATARRLGAIVSATDVRPAAKEEIKSLGAAFVGVED
                     AETAGQTGAYAREMSDAFRQKQAELMATTIAKNDMVICTALVMGRRAPTIVTNAMVAS
                     MKPGSVIVDLASDAGGNCEATTPGERTEVNGVTILGYRNWPGRIPVAASSLYAKNLLT
                     FLTTFWDKEAKLPHLPETDEIIKGVMLTRGGAIVHPSFLPSQAA"
     gene            complement(2301..>3452)
                     /locus_tag="VHX39_14175"
     CDS             complement(2301..>3452)
                     /locus_tag="VHX39_14175"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3992314.1"
                     /translation="IAGQGVLLAEATPDLVAFAERTSIPVVTSPNGKGSINESHPLAF
                     GSIGRNGTYAANDATKHADVILALGFTFDDRATSAWLDGYTLSIPPSRLIQIDIDPTE
                     LGRNYPAELPILGCARASLKYMNGLLHSPAATVSSARETWLRRLTHGREVWQTWQSSL
                     AASDQMPLRPERLMRALSRAVPENAIVASDVGVHHNWIIQLFDALRPRQLIHSWGFAA
                     MGFATSGILGAKLAAPDRPCVAVVGDGSFLMTPHALATAVEYDIPVVWVVWNNRGYCS
                     IRDIQHGMFAGRELVTSFQMQHGNRELYSPDFAALAHSFGVASHTVTHAGEVEDAIAT
                     AVAANRPYLIEVPVDREIRPIGTGSWALPPLPQPEPNFLQALAASGLSI"
BASE COUNT          682 a         1081 c         1107 g          582 t
ORIGIN      
        1 agcgagccgg agaatgtgat cgcgccaatg ccaagcccca acgacatttc cacgaggctc
       61 tgcgtgcgga tcgctcctgg cacaccgatt ccgaacgcct ccggcgcatt caatgccgcc
      121 gccgcaacga acaccgctgc caggccgaca agcgagtgaa acgccgcgac cagctggggc
      181 agggcggtca tttgaatgcg cagcgccacc acaacgccgg tactgccgcc gatcaccagg
      241 cccagggcga tcagaccgaa cccgcccaaa ctcatgtcgt ggtgcaacag cgtggcaatg
      301 atcgccaccg ccatgccgat catgccgaac cggttgcccg accgcgacgt caccggcgaa
      361 gacagcccgc gcagcgccag aatgaacagg acggccgcga ccagataggc gagcgaggtg
      421 agactggcgg acatcagcgc tgcctattgt ttccgtttga acatcgacag catgcgctgc
      481 gtcaccagga acccgccgaa gatgttcacc gatgccagcg tgaccgcaat gaagccaaac
      541 gcgaccgacc accatgaggt gcccagtccg gtggcaagca tggcgccgac gataatgacg
      601 gaggagatcg cgttggtcac cgccatcaac ggcgaatgca acgccggcgt gacgttccac
      661 accacgtagt aaccgacgaa gcaggccatg aggaaaaccg ccaacagata gatgaacggt
      721 tccacgaccg gcgccacctg accgatcgtt ccggtaatcg actgggcgtg catcgccaac
      781 gcgttggcct gctcggcgag ccggcgggct tcatccgcga tttgtgacgg gtccatacgg
      841 ggtctccggt actcaggcgg cctgggaggg caggaagctc gggtgcacga tcgcgccacc
      901 tcgggttagc attacgcctt tgatgatctc gtccgtttcc ggcaagtgag gtagcttcgc
      961 ctccttgtcc cagaacgtcg tcagaaaggt cagcaggttc ttcgcgtaca gcgacgacgc
     1021 ggcgaccggg atccgacctg gccagttgcg atagccgaga attgttacgc cgttcacttc
     1081 ggtccgttca cccggggtcg tcgcctcaca attgccgccg gcgtcagagg ccagatcgac
     1141 gatcacgctg cctggcttca tcgaggcaac catggcgttg gtcacgatcg tcggtgcacg
     1201 acggcccatc accaatgcgg tgcagatcac catgtcgttt ttggcgatcg tggtggccat
     1261 caattcggcc tgcttctgac ggaacgcgtc gctcatttcg cgtgcgtagg caccagtctg
     1321 accggcagtc tccgcatcct caacgccgac gaaggctgcg ccaagagact tgatttcctc
     1381 cttagcggcg ggccggacgt cggttgccga tacgatggca ccaagtcggc gggcagtggc
     1441 gatcgcctga aggccggcga cacccgcgcc aatgatgaac acccgcgccg gaggcaccgt
     1501 gccggcggca gtcatcatca tcggaaagcc gcgttgaaat gcataggcgc cctcgatgac
     1561 cgcgcgatag ccggctaggt tggcctggct cgacagtacg tccatcgatt gggcgcgcgt
     1621 gatgcgcggc agcagttcca tggctgcggt atcgatcccg gcagcggcca gggacggcac
     1681 cagttcggcg tcggcgaagg cgccggcgat gcaaatcagc agggcgccgc gctcgatcaa
     1741 cgcgcgttcc tcaggcaatg gtgcctggac cgacagcact acacccgcac ctgcaagggc
     1801 tgacgcggga tcggcggcaa tctccgcacc ggcggctgca aattcggcgt ccgggatgga
     1861 tgtctgagct cccgctccgg tttcgatggc gacggtcagg ccaaggccaa tgagccgttt
     1921 gactgtgtcc ggtgtcgcag cgacccgagc ttcgggcaca cggcgttcct tcagcaccgc
     1981 gaggcgcatc caacgaatcc ttcacgcatc tgagagtctg ggcccggggg aagggcgccc
     2041 agagccgagg tcgagcttcc cccgaccaat gcaccgcacc ggcgcgtgtt gcaaggggag
     2101 gttgcgtgaa cccaccatca aacctcgggt taggcgtctt ccggacactg caatcccggt
     2161 tctggatggt cgtggcgttc gtagggaacc cagcccgggc gaccttgccg acaaggcctg
     2221 gagcaagtcg accgccgctg gttgcggcca caattggcgc ggccgacatg ttcgggtacc
     2281 ggtttcgacc gaacgttgcg ctaaatcgac aatccggacg cggcgagggc ctgaagaaag
     2341 ttcggctccg gctgaggcag cggcggcaac gcccaactgc ctgtgccgat cggacgaatt
     2401 tcacggtcca ccggcacctc gatgagatag ggacgattgg ccgcaacagc ggtggcgatc
     2461 gcgtcctcaa cctcaccggc atgtgtaacg gtgtgcgatg cgacgccgaa cgagtgcgcg
     2521 agagcggcga aatcgggtga gtacagctcg cgattgccat gctgcatttg gaaactggta
     2581 acgagttcgc ggcccgcgaa catgccgtgc tggatgtcgc ggatcgagca ataacctcga
     2641 ttgttccaca ccacccagac caccgggatg tcgtattcca cggcggttgc caaagcatgc
     2701 ggtgtcatga ggaatgaccc gtcgccgacc accgccacac aaggccggtc tggtgcggcg
     2761 agtttcgcgc ccagaatacc ggaggtggca aagcccatcg ccgcaaagcc ccaggagtgg
     2821 atcaactgcc gcggccttag cgcgtcgaac aattggatga tccagttgtg gtgcacgccg
     2881 acatcgctcg ccacgatggc gttttctggc acggcgcgag acagcgctcg catcagccgc
     2941 tcgggacgca gcggcatttg gtcggaggca gcgagactgc tttgccaagt ttgccagacc
     3001 tcgcggccgt gcgtcaggcg cctcaaccat gtttcgcgcg cggaagagac tgtggcggcg
     3061 ggactgtgca gaagtccgtt catgtactta aggctggcgc gggcacaccc caggatcggc
     3121 agctccgccg gatagttgcg gcccagttcg gtgggatcga tatcgatctg aatgaggcgg
     3181 gagggcggga tggatagcgt atagccgtcg agccaggcac tggtagcacg atcatcgaaa
     3241 gtgaagccaa gtgccaggat cacatcggcg tgtttcgttg cgtcattggc ggcataggtg
     3301 ccgttgcggc cgatcgaccc aaatgccaga ggatgggatt cgttgatgga gcctttgccg
     3361 ttcggactgg tcacgacagg aatggatgtc cgttcggcga acgccaccag atccggcgtc
     3421 gcttcggcca gcagcacgcc ctggccggcg at
//
LOCUS       DATAVD010000747         2705 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2301690, whole genome shotgun sequence.
ACCESSION   DATAVD010000747 DATAVD010000000
VERSION     DATAVD010000747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2705
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2301690"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            9..467
                     /gene="fabZ"
                     /locus_tag="VHX39_14180"
     CDS             9..467
                     /gene="fabZ"
                     /locus_tag="VHX39_14180"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEX3992315.1"
                     /translation="MELIDIHRIMHDIPHRYPFLMLDRVVDVVLSTSAVGIKNVSIND
                     GFFAGHFPNHPVMPGVLIIESMAQTAAVLVVETLGPDAAGKLVYFMSIEGAKFRRPVV
                     PGDQLRIHIVKERSRGNVWRFHGIAKVDGTTVAEATYSAMIMDRAAPPSS"
     gene            732..1526
                     /gene="lpxA"
                     /locus_tag="VHX39_14185"
     CDS             732..1526
                     /gene="lpxA"
                     /locus_tag="VHX39_14185"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006559472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEX3992316.1"
                     /translation="MTDRTSIHPTAIVAHGAELGPGVEIGPFCTVGPNVVIEAGAKLV
                     SHVVVEGYTRIGEGAQLFPFCTVGLAPQDLKYKNEPTRCEIGARTLVREHCTIHRGTA
                     TGVGVTRVGSDCMLMAVVHVAHDCQLGSNVIIANNAVMGGHVSIGDHAVVGGSAAIHQ
                     FVRIGRAAMIGGVSGVEGDVIPFGSVIGNRARLAALNVVGLRRRGFDKESIQRLHIAF
                     KALYSKQGVFAQRLEATRAKFGDDPLVGEVLAFIDAPSHRGLIRAE"
     gene            1578..>2705
                     /locus_tag="VHX39_14190"
     CDS             1578..>2705
                     /locus_tag="VHX39_14190"
                     /inference="COORDINATES: protein motif:HMM:NF012432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HEX3992317.1"
                     /translation="MSDTLPTATRVADPGIRALYRLENRWQAWLDVEVALARAQAELG
                     IIPAAAADAIAGAARLEKMDRARIDEGFARTGHTIVPLVWELSRVVGDPHGGWVHWGA
                     TTQNITQTGDLLVLRQAHTVFLRQIGEILSAMASLAERGAEMPIAGRTHGQHAVPATF
                     GYKVAVWIDELIRHTDRFRQAAPRLFVAMLGGGAGTYASLGKNGPPVQQAIGRLLGFG
                     SMTVPSRAIGDHLAENIMLLGLLAATCGKIGREIYTLMKTEFGEVEEPVPPGTVGSST
                     MPQKRNPKLCQDIIAAAAEIRCMVPLALEAMMTEHEADRTTSLMMDTAESRCCIATGD
                     MLSRLAEVVGDLRLDPVRMRANLDLGGGLIMAEAVMLELGAA"
BASE COUNT          494 a          864 c          882 g          465 t
ORIGIN      
        1 gcaaaaccat cgagctgatc gatatccatc gcatcatgca cgacatcccc catcgctacc
       61 cgttcctgat gctggaccgg gtggtggacg tcgtgctgag cacatcggcg gtcgggatca
      121 agaatgtctc gatcaacgat ggcttctttg ccggccattt ccccaaccac ccggtcatgc
      181 cgggcgtgct gatcatcgag agcatggcgc agaccgcagc cgtgctggtg gtggagacgc
      241 tggggccgga tgccgccggc aagctggtgt atttcatgtc gatcgagggt gccaaattcc
      301 gccgccccgt cgtgccgggc gatcaactgc gcattcatat cgtcaaggaa cgcagccgcg
      361 gcaacgtttg gcggttccat gggatcgcca aggtggatgg cacgacggtg gcggaggcga
      421 cctactccgc tatgatcatg gaccgcgccg cgccgccttc gtcttgagca tgatcgcgcc
      481 gagcggcacg agcgaagcgc gtgaatcatg cgatcaaacg agcgccaaat tgtgttcagg
      541 cgcctgcgtg cggtttggta acgccaaaat cctaggcgaa acagagtgtt acagggcagg
      601 atcggaaaca tcgggcaaca atgattgagt tggaggccgc cgcccccgcc catagtttgg
      661 ccgcgatcct ggcccaatag atgcgacgga accgaatatt catggactcg atgacggata
      721 tcagcccaca catgaccgat cgcaccagca ttcacccgac cgcgatcgtg gcgcatggcg
      781 ccgaactggg ccctggcgtg gagatcggcc cgttctgcac ggtcggaccg aatgtcgtca
      841 tcgaggccgg tgccaagttg gtgtcgcatg tcgtggtcga aggctacacc cgcatcgggg
      901 aaggggctca gttgttcccc ttctgcaccg tgggcctggc gccgcaggat ctgaaataca
      961 aaaacgaacc gacgcgctgc gaaattggcg cacgcaccct ggtgcgggag cattgcacca
     1021 tccatcgcgg caccgcgacc ggcgtcggcg tgacccgggt cggcagcgac tgcatgctga
     1081 tggcggtggt ccatgtcgcg cacgactgcc aactgggcag caacgtcatc atcgccaaca
     1141 acgcggtcat gggcggccat gtcagcatcg gcgaccacgc ggtggtcggc ggatcggcgg
     1201 ccatccacca gttcgtccgc atcggccggg cggcgatgat cggcggtgtc tccggcgtcg
     1261 agggtgacgt gatcccgttc ggcagcgtca tcggcaatcg tgctcgtttg gctgctctga
     1321 acgtcgtcgg cctgcgccgc cgcggcttcg acaaggagtc gatccagcgg ctgcacatcg
     1381 cgttcaaggc gctctacagc aagcagggcg tgttcgcgca gcgactggaa gcgactcgcg
     1441 ccaaattcgg cgacgatccc ctggtcggcg aagtcctggc cttcatcgac gccccgagcc
     1501 atcgcggctt gatccgggcg gagtagcttg ccgccaatgc cgtgtgctgc gatcctccgc
     1561 cgaaagagga gacagccatg agcgacacat tacccaccgc cacgcgggtt gccgatcccg
     1621 gcattcgcgc gctgtaccgg ctggaaaacc gctggcaggc ctggctggat gtcgaagtgg
     1681 cgctggcccg cgcccaggcg gaactcggca tcatccccgc cgccgccgcg gacgcgatcg
     1741 ccggtgccgc tcggctggag aagatggatc gcgcccgcat cgatgagggc ttcgcccgca
     1801 ccggccacac gatcgttccg ttggtctggg aactcagccg cgtcgtcggc gatccgcatg
     1861 gcggttgggt ccattggggt gcgacgacgc agaacatcac ccagaccggt gatctgctgg
     1921 tcctgcgaca ggcccacacc gtgttcctgc ggcagatcgg cgagatcctt tcggcgatgg
     1981 cgagcctggc cgaacgcggc gccgagatgc cgatcgccgg ccgaacccat ggccagcacg
     2041 ccgtccccgc gaccttcggc tacaaggtcg ccgtctggat cgacgaattg atccgccaca
     2101 cggaccgttt ccgccaggcc gcgccgcgtc tgttcgttgc tatgttgggc ggcggcgccg
     2161 gcacctatgc ctcactcggc aaaaacggac cgcccgtgca acaggcgatc ggccggctgc
     2221 tcggttttgg ctccatgacc gttccatcgc gcgccatcgg tgatcacctg gcggaaaata
     2281 tcatgctgct gggcctgctc gccgcgacat gcggcaaaat cggccgcgaa atctacacat
     2341 tgatgaagac cgagttcggt gaggtggaag aaccggtgcc gcccggcacc gtcggcagtt
     2401 ccaccatgcc acagaaacga aatccgaaac tgtgccagga catcatcgcc gccgccgccg
     2461 aaattcgctg catggtgccg ctggcgctgg aagcgatgat gacggagcat gaggcggacc
     2521 ggaccacaag cctgatgatg gacacagcgg aatcgcgatg ctgcatcgcg accggcgaca
     2581 tgctgagccg cctggccgag gtggtcggcg acctgcggct cgatccggtc cggatgcgtg
     2641 ccaatctgga tcttggcggc ggcttgatca tggccgaggc agtgatgctg gaactggggg
     2701 cggcg
//
LOCUS       DATAVD010000748         6502 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2675868, whole genome shotgun sequence.
ACCESSION   DATAVD010000748 DATAVD010000000
VERSION     DATAVD010000748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6502
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2675868"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(242..2512)
                     /locus_tag="VHX39_14195"
     CDS             complement(242..2512)
                     /locus_tag="VHX39_14195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014413725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3992318.1"
                     /translation="MRITVRAKLALAFAFVIVLSALTAWLGISNLASLNATLHRVVQG
                     PAQRVILSQEMSEQLLAIVRAEKNLNLSDSKEDILNFTTELATLRPAFTSRLDQAEAS
                     ASTEGKPLWSAARSLWQQLSAVQDRIIDAVQHDARPQARELSMGPAKQLVTQTRAALQ
                     PVVDLNRKLFVDAETDAQNEYENARLLLISFVLVATLFAAATGAWIAFGISRGMMHAI
                     TLAKAVAIGDLSHEVAVSSNDEIKDMVDALNQMTSNLRGTAAVADAIAGGDFTNDNKR
                     LSDKDTLGIALERMTANLRSTAKVANAIAEGDLSTEVKRLSDKDSLGMSLERMTANLR
                     ATASVADAIADGDLTMASKRLSDKDMLGISLERMTSNLRATATVADAIADGDFSLEAR
                     RRSSKDVLGIALERMTTNLRATAKIADAIADGDLTIEAKRLSDKDMLGTALERMLARL
                     RTVVTDASAAADNVSSGSEQLSSTAVAMSQGATEQASAAEEASASMEEMASNIKQNAD
                     NATQTEKIARQSAADAQKSGEAVDRAVQAMQTIAERIIIVQEIARQTDLLALNAAVEA
                     ARAGEHGKGFAVVASEVRKLAERSPTAATEIGAVSSQTVKAAQEAGTMLSQLVPDIKK
                     TAELVTEISAACREQDIGADQINQAIQQLDKVTQQNASASEQMSATSEELAAQAEQLQ
                     SSIAYFRLDTTTAAAPPQKSAQRRSVQPAIPARPVKPAASRLSASGNGRSKPGGHTLN
                     LGKGGADQHDAEFERM"
     gene            complement(2539..3051)
                     /locus_tag="VHX39_14200"
     CDS             complement(2539..3051)
                     /locus_tag="VHX39_14200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004272550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HEX3992319.1"
                     /translation="MDQEMATDTQFVTLGIGREVFAVPVDTVLEILDMRELFRMPDAP
                     AHLAGLIDVRGRSVPVIDLRVKLGLPAASVNEGTRIMVLEVPIAGRQLVLGLIADRVY
                     EVASLDGGKLEPPPDIGTKWHSQYISGVGRRGEHFVVVFNLGELFGSDEHAFIRAATH
                     AAATERSAAA"
     gene            complement(3056..6046)
                     /locus_tag="VHX39_14205"
     CDS             complement(3056..6046)
                     /locus_tag="VHX39_14205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3992320.1"
                     /translation="MSFLSLRNHSNARMELQEIQRLTRAIANGSLTARSDVQSATGES
                     RALLAAVNELLDAALLPIGEGNRILDQIAHGKLDELITQTYQGDHDKMKQNVNGIAIV
                     LQKFLAEVGKLTEFSRQGQLVKRGDAAGFQGAYADVIKGVNQMLDAILLPIGEGNRIL
                     DQVAHGKVDELITQTYQGDHERMKLNVNAIAAVLQKFQAEIAKLTEFSRQGYLEKRGD
                     TLGFQGAYGDIIKGVNDMLDAILLPIGEGNRILDQIAHGKVDELIAQTYRGDHEKMKQ
                     NVNGIAVVLQRFQSELGKLTEFSHQGRLEKRGDAAAFQGAYGEVIKGINEMLDAILIP
                     IGEGNRILDQIAHGKVDELITQTYNGDHEKMKQNVNGIAVVLQKFQAEIARLTEFSRL
                     GQLEKRGDAVAFQGAYAEVIKGVNEMLDAILLPIGEGNRILDQIAKGKVDELISQTYK
                     GDHEKMKQSVNNIAIVLQKFEAEVAKLTEFSRQGQLDKRGDTASFQGAYADVIKGVNE
                     MLDAILLPIGEGNRILRQISGGNLKQRIEIECKGDHQRMKEAVNGVHSWLKDLIAYVT
                     AIAGGDMTAKMDRASDDDQIHEWLMLLKSNIGHVVGDADTLVKAAVEGRLSVRADASR
                     HSGEYRRIVDGLNNTLEAVVAPMNVASEFIERISKGDITAKITQSYSGDYNSLMQSIN
                     NLVDNLTRFALDVQGAADQVASGSEQSSASAQSMAEGASEQASSTEEASASIEQMSAN
                     IKQNAENANQTEKIAAQSSRDAQASGEAVDKAVEAMQTIAEKITIVQEIARQTDLLAL
                     NAAVEAARAGEHGRGFAVVASEVRKLAERSQAAAGEIGQLSASTVKAAQDAGQMLSRL
                     VPAIKKTAELVTEISAACREQDIGTDQINQAIQQLDRVTQQNASASEQMSATSEELAA
                     HAEQLQTSVAFFRMETSGRPAPTHHAAVVTAPRRAAATQRSAQPAAKPAAARNGKDKS
                     KGSGFALNLTTGGADHRDAEFERM"
     gene            complement(6224..>6502)
                     /locus_tag="VHX39_14210"
     CDS             complement(6224..>6502)
                     /locus_tag="VHX39_14210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3992321.1"
                     /translation="MSATSEELAAQAEQLQSSIAYFHVDADTAGREPRREAPKRPSQP
                     ATAARPARHAPVASPPPRNNAARHKPNGFALNLATGGTDHRDAEFERM"
BASE COUNT         1087 a         2011 c         1925 g         1479 t
ORIGIN      
        1 tcggtaaata tcaaattgac gagtttcacg cgttggaccg ggccttgcag cagctcatca
       61 atcgttgagt tcagagagcc caggctgctg atgccaattc cggcagtaat tgccgagagc
      121 agaatgacgg cggcgaacgc cagccccaac ttcaatttaa cggtgatgcg catggccgaa
      181 cggttcccga aaacgatgat agttgcgtgc tgcctgatgg gtggcggttt ggttcatcga
      241 cctacatccg ctcgaactcg gcatcatgtt gatcggcgcc acccttgccc agattgagcg
      301 tgtgcccgcc cggcttgctt cggccattgc cggaagctga caacctggag gcggcgggtt
      361 tcaccggccg cgccgggatg gccggctgaa cggaacgcct ttgcgccgac ttttgcggcg
      421 gcgcggcagc agtcgttgtg tccagtcgga aatacgcaat gctggactgc aattgctctg
      481 cctgtgccgc gagctcttcc gaggtcgccg acatctgctc ggatgcgctg gcattctgct
      541 gcgtcacttt atcaagttgc tggatcgcct ggttgatctg atcggcgccg atatcctgct
      601 cacggcaggc agcgctgatt tccgtcacca gttccgcggt ctttttgatg tccggaacca
      661 actgacttag catcgtcccg gcttcctggg ctgctttcac cgtttgcgat gacactgcac
      721 caatctcggt cgccgcggtc gggctgcgct cggccagctt gcggacttcc gaggcaacga
      781 cagcaaaacc tttgccgtgc tcgccggccc gcgcagcctc gactgcggcg ttcaacgcca
      841 gcaaatcggt ctgacgggcg atctcctgca cgatgatgat acgctcggcg atcgtttgca
      901 tcgcctgcac cgcacgatcg accgcctcac cgcttttctg tgcatcggcc gccgactgcc
      961 gcgcaatctt ctccgtctgt gtggcgttgt cggcgttctg cttgatgttg gatgccattt
     1021 cctccatcga cgcagaagcc tcctccgccg cggaagcctg ttcggtggcg ccctgcgaca
     1081 tcgccaccgc ggtcgacgac aattgctcgc tgcccgacga gacgttgtcg gcagcggcgg
     1141 aagcatctgt gacgaccgtc cgcagccggg ccaacatgcg ttcgagcgcg gtgccgagca
     1201 tgtctttgtc ggacagccgt ttggcctcga tcgtcaggtc gccgtcagcg atcgcatcgg
     1261 caatctttgc ggtcgcgcgc aggttggtcg tcatacgttc caaagcgatg ccgagcacgt
     1321 ccttgctgga acgccgcctt gcctccagcg aaaaatcacc gtcggcaatg gcgtcggcaa
     1381 ccgttgcagt ggcacgcagg ttcgacgtca tacgctcgag cgatatcccc agcatgtcct
     1441 tatcggaaag acgctttgac gccatcgtca ggtcaccgtc ggcgatggca tcggcaaccg
     1501 aggccgtcgc tcgcaaattc gcggtcatac gttccagtga catgcccaga gagtccttgt
     1561 cggacagccg tttgacctcg gtcgacagat cgccctcggc aattgcgttg gcgactttcg
     1621 cggtggagcg cagattggcc gtcatccgct ccagtgcgat gccaagcgtg tctttgtcgg
     1681 agaggcgttt gttgtcgttg gtgaaatcgc cgccggcaat ggcgtcggca acggctgccg
     1741 tcccccgcag attgctggtc atctggttga gcgcgtcgac catatccttg atctcgtcgt
     1801 tgctgctgac tgcgacttcg tgactgagat cgccgatagc caccgccttc gccagcgtaa
     1861 tggcgtgcat cattccacgt gagatcccga aagcgatcca cgccccggtt gccgccgcaa
     1921 acaaagttgc gaccagcacg aacgaaatca gcagcagccg ggcgttttca tattcattct
     1981 gcgcgtcggt ctcagcatcg acgaaaagtt tgcggtttag atcgaccacc ggttgcaatg
     2041 ctgcgcgggt ctgcgtcacg agctgtttcg cagggcccat cgacaattcg cgtgcctgcg
     2101 gccgggcgtc gtgctgcacc gcatcgatga tcctgtcctg aaccgctgat aattgctgcc
     2161 agaggctgcg tgcggcgctc caaagcggct tgccttcggt actggcgctg gcttcggcct
     2221 gatcgagacg cgacgtgaac gccggccgca acgtggcaag ttcggtggtg aaattaagga
     2281 tatcttcttt gctgtccgac aaattcaggt tcttctccgc ccgcacgatt gccagcagtt
     2341 gctcggacat ttcctgggac aggatcacgc gttgcgccgg gccctgcacg acgcgatgca
     2401 acgtcgcgtt cagcgatgcc agattgctga tcccaagcca ggccgtcagt gccgacagca
     2461 cgataacgaa ggcaaaagcc agtgccagtt tggctcgtac ggtgatgcgc ataacgtggt
     2521 tgctccggag aattacggtc aggcggcggc gctgcgctcg gtcgcagcgg catgcgtggc
     2581 ggccctgatg aacgcgtgct cgtcggatcc gaacagctcg cccagattga acacgacgac
     2641 aaagtgttcg ccgcgccgtc cgacgccgct gatgtactgg gagtgccatt tcgtgccgat
     2701 atccggcggc ggttcgagct tgccgccgtc cagcgaggcc acctcgtaca cccggtccgc
     2761 gatcaggccg agcacgagtt gccgcccggc gatcggcact tccagcacca tgatacgcgt
     2821 gccttcgttg accgaggcgg cgggcaagcc cagtttcacc cgcagatcga tgaccggcac
     2881 gctgcgaccg cgcacatcga tcagaccggc gagatgcgcc ggcgcgtccg gcatgcggaa
     2941 cagctcccgc atatcgagaa tttccagcac ggtatcgacc ggcacggcga acacctcgcg
     3001 gccgatgcca agtgtaacga actgggtgtc ggtcgccatt tcctggtcca tctgcttaca
     3061 tccgctcgaa ttcggcatca cggtgatccg cgccgccggt ggtgaggttg agagcaaagc
     3121 cgctgccctt ggacttgtcc ttgccgttgc gtgccgctgc cggtttggca gctggttggg
     3181 ccgacctttg ggtcgcagca gcccgccgcg gtgctgtcac aaccgcggcg tgatgtgtcg
     3241 gcgccggccg gccacttgtc tccatgcgga agaacgcaac gctggtctgc aattgctcgg
     3301 catgggctgc cagttcctcg gaggtcgccg acatctgttc cgatgcgctg gcattctgtt
     3361 gcgtgacccg atcgagctgc tggatcgcct ggttgatctg atcggtgccg atgtcttgct
     3421 cgcggcacgc agcgctgatc tcggtcacca gttccgccgt cttcttgatc gccggcacca
     3481 acctgctcag catctgcccc gcatcctggg ctgccttcac agtgctggcg gagagttgcc
     3541 cgatctcgcc ggccgctgcc tgactgcgtt cggccagttt gcgaacttcg gaggctacga
     3601 cagcgaagcc gcggccatgt tcgccggcac gcgccgcttc aaccgcagca ttcagcgcca
     3661 gcaggtcggt ctggcgagcg atctcctgca cgatggtgat tttttcggca atcgtctgca
     3721 ttgcctcaac cgccttatcg acggcttcgc ccgacgcctg tgcatcgcgt gaggactgcg
     3781 ccgcgatctt ttccgtctga ttggcgtttt cggcattttg cttgatgttg gcggacattt
     3841 gttcgatcga cgcagacgcc tcctcggtcg aggacgcttg ttcgctggcg ccctctgcca
     3901 tcgattgcgc cgatgcactg gattgctcgc tgcccgaggc cacctggtcc gccgccccct
     3961 gcacgtcgag tgcgaaacgg gtcagattgt cgaccaggtt attgatgctt tgcatcaacg
     4021 aattgtaatc gccgctgtac gattgggtga tctttgcggt gatgtcccct ttggagatgc
     4081 gttcgataaa ctcgctggcg acattcatcg gtgcaacgac cgcttccagc gtattgttaa
     4141 ggccatcgac gatgcgccga tattcgccgc tgtgacgtga cgcatcggcg cgcaccgaca
     4201 gcctgccctc gaccgcagcc ttcaccagcg tgtcagcgtc gcccacaaca tggccgatgt
     4261 ttgatttcag caacatcagc cattcatgga tctgatcgtc gtccgaggcc ctgtccatct
     4321 tcgccgtcat gtcgccgccg gcaattgcgg tcacgtaagc gatcagatcc ttcagccagg
     4381 aatggacgcc gttcaccgct tccttcatgc gctggtgatc gcctttacat tcaatctcga
     4441 tccgttgctt gaggttgccg ccgctgatct ggcgcaggat gcggttgccc tcgccgatcg
     4501 gcagcaggat ggcgtcgagc atttcgttga cgcctttgat aacgtcggcg taagcgccct
     4561 ggaacgaagc cgtatcgccg cgcttgtcca actggccctg gcggctgaat tcggtcagtt
     4621 tcgcaacttc cgcctcgaat ttttgtagta cgatggcgat gttgttgacg ctctgcttca
     4681 tcttctcgtg atcgcccttg taggtctgcg agatcagctc atcgacctta cccttggcga
     4741 tctggtccag gatgcggtta ccttcgccga ttggcagcag gatggcgtcg agcatttcgt
     4801 tgacgccttt gatcacctcg gcgtaagcgc cctggaaagc tacggcgtcg ccgcgttttt
     4861 ccagttgtcc caggcgactg aattcggtca ggcgggcaat ctcggcctgg aatttttgca
     4921 gcacgacggc gatgccgttg acgttctgct tcattttctc atggtcgcca ttataggttt
     4981 gcgtgatcag ttcatcgacc ttgccatgcg cgatctgatc gaggatgcgg ttgccttcgc
     5041 cgatcgggat cagaatggca tcgagcattt cgttgatgcc cttgatgacc tcgccgtaag
     5101 caccctggaa agccgccgca tcgccacgct tttccaacct gccctggtgg ctgaactcgg
     5161 tcagcttgcc cagttcggat tggaagcgtt gcaggacgac ggcaatgccg ttgacgtttt
     5221 gcttcatctt ttcgtggtcg ccgcggtagg tttgcgcgat cagttcatcg accttgccgt
     5281 gcgcgatctg gtccagaatg cgattgcctt cgccgatcgg cagcaggatg gcgtcgagca
     5341 tgtcgttgac gcctttgatt atgtcaccat aggcaccctg gaatcccaac gtgtcgccac
     5401 gcttctccaa atatccctgg cggctgaact cggtcagttt ggcaatttcg gcctggaatt
     5461 tctgcagtac ggccgcaatg gcgttgacgt tcagcttcat cctttcgtgg tcgccttggt
     5521 aggtctgcgt aatcagttca tcgaccttgc catgcgccac ttgatcgagg atgcgattgc
     5581 cttcgccgat cggcagcaga atggcgtcga gcatttgatt gacgcctttg atgacgtcgg
     5641 cataagcgcc ctgaaaaccc gctgcgtcac cgcgctttac cagttgcccc tggcggctga
     5701 actcggtcag tttgccgacc tccgccagga acttttgcag cacaatggca atgccattga
     5761 cgttctgctt cattttgtcg tgatcgccct ggtaggtttg cgtaatcagc tcatcgagct
     5821 tgccatgggc tatttggtcg aggattcgat tgccctcacc gatcggcaaa agtgccgcgt
     5881 ccagcaattc gttcactgcc gccaacaatg ccctggactc gccggtcgcg gactgtacat
     5941 ccgaacgcgc ggtcagcgaa ccattggcga ttgctcgcgt cagtcgctgg atctcctgca
     6001 attccatccg tgcattgctg tgattgcgca aactcaagaa tgacattgta gtctccgggt
     6061 gagagattga tcgaacacgg cgggaagctt gatgtgaccc gcgatgccgg cgcagaatcg
     6121 gcgcgacatc gggcaccgct ttgcagtttc gccggccacg caaccatgcg gccacggtgc
     6181 aacgcggttg acaggcagcc agcccgtgtt gccacacatt ggcctacatc ctttcgaatt
     6241 cggcatcgcg atgatccgtg ccgccggtgg cgaggttgag tgcgaaaccg ttcggcttgt
     6301 gccgggccgc attgttacgg ggcggcggcg aagcgaccgg cgcatgcctc gccggccgtg
     6361 ccgcggttgc cggctggctg gggcgcttcg gcgcttcccg tcgcggctcg cggcctgcgg
     6421 tgtctgcgtc gacatggaaa taggcaatgc tggactgaag ttgttctgcc tgtgccgcca
     6481 gttcctccga cgtcgccgac at
//
LOCUS       DATAVD010000749         3446 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_442113, whole genome shotgun sequence.
ACCESSION   DATAVD010000749 DATAVD010000000
VERSION     DATAVD010000749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3446
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442113"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VHX39_14215"
     CDS             <1..207
                     /locus_tag="VHX39_14215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992322.1"
                     /translation="WRIPTVLMTAMSGMAFGSWFAGKQVDLFLSYRPAFASGVAFNLI
                     NLMVILLLVSRMVPRRRLTMAAAS"
     gene            complement(216..620)
                     /locus_tag="VHX39_14220"
     CDS             complement(216..620)
                     /locus_tag="VHX39_14220"
                     /inference="COORDINATES: protein motif:HMM:NF017020.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEPN domain-containing protein"
                     /protein_id="HEX3992323.1"
                     /translation="MTQEASQALATARRHLVDARPVVRLKITYIAGREAYLAAYHAAE
                     AYLHHRTGKIAKTHRGLRTEFARLALSESRIDPEFVRFLADAYEIKSIADYGAEPEAN
                     VSLEQANMAIETAGRLIECIADLIGSRDGTDI"
     gene            complement(617..940)
                     /locus_tag="VHX39_14225"
     CDS             complement(617..940)
                     /locus_tag="VHX39_14225"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014239542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEX3992324.1"
                     /translation="MQSDPADDPVMRRFRAALDALYGARLERAVLFGSRARGDARSDS
                     DYDVAVFLRDFSSLWEELQPLGAITTAILLDTDAVISPKPFPAGAYQTRSLLMGEIRR
                     EGVDL"
     gene            1640..2914
                     /gene="rho"
                     /locus_tag="VHX39_14230"
     CDS             1640..2914
                     /gene="rho"
                     /locus_tag="VHX39_14230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEX3992325.1"
                     /translation="MHLAELKQKTPAELVNFAESLQIENASSLRKQDIMFAILKNLAD
                     NDQPIQGDGTLEILSDGFGFLRSPEANYLAGPDDIYVSPSQVRRFGLRTGDTVDGQIR
                     APRDGERYFALLKVDAVNFEPPDAVRHRVNFDNLTPLYPEERLKMETETFQSVAKGPT
                     KDFTPRVIDLISPVGKGQRALIVAPPRTGKTVMLQNMAAAIAANHPEVFLIVLLIDER
                     PEEVTDMARSVKGEVISSTFDEPATRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRL
                     ARAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMD
                     EVIFEEFKGTGNSEIILDRKLSDKRSFPAIDITKSGTRKEELLVERGTLTKMWVLRRI
                     LNPMGTVDAMEFLLDKLKYSKTNNDFFDAMNT"
     gene            complement(2935..>3446)
                     /locus_tag="VHX39_14235"
     CDS             complement(2935..>3446)
                     /locus_tag="VHX39_14235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019088264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphatase"
                     /protein_id="HEX3992326.1"
                     /translation="LGSIVTFVPILDTDQKEFSRVLELVNKTNQFNTTGKRWTNAEMA
                     AFFAGGGRIAAFRAKDKFADYGLIGTLFASGPEIVQFVMSCRVLGMEIEQFAVAKAIA
                     QLRSEHPRAATVACLRETEDNMVCRDVFAKAGFRLVGRDGAELRFELGSADPIREPSH
                     IRVEFQAPS"
BASE COUNT          692 a         1171 c          982 g          601 t
ORIGIN      
        1 tggcgcatcc cgacggtgct gatgacggcg atgtcgggga tggcgtttgg aagctggttc
       61 gccggcaagc aggtcgacct gttcctgtcc taccggccgg ccttcgcctc cggcgtggcg
      121 ttcaacctga tcaacctgat ggtgatcctg ctcctggtca gccgaatggt cccccgccga
      181 cgcctgacca tggccgcggc gtcctgaggt cgggttcaga tgtcggtgcc gtcccgcgat
      241 ccgatcaaat cggcgatgca ctcgatcagc cggccggccg tctcgatcgc catgttcgcc
      301 tgttccaggg agacgttcgc ttccggctcc gccccatagt ccgcgatgga ctttatctcg
      361 tacgcatcgg cgagaaaccg gacaaattcc gggtcgattc gcgattcgct cagcgccaga
      421 cgagcgaatt cggtacgaag cccacggtgg gtcttggcga tcttaccggt tcgatggtgc
      481 aggtatgcct ccgccgcatg atatgcggcg agataagctt cccggcctgc gatgtatgtt
      541 atcttcaacc tgacaacggg cctcgcatcg acaaggtggc gccgtgcggt cgccagggcc
      601 tgacttgcct cctgcgtcaa agatcaacac cctcgcgccg gatttccccc atcagcagcg
      661 atcgggtttg gtaggccccc gcgggaaacg gcttcggcga gatcaccgca tcggtatcca
      721 gcaggatagc tgtcgtaatc gcgcctaacg gctgcaattc ctcccacagg ctgctgaagt
      781 cgcgcagaaa caccgcgaca tcgtaatcgg agtccgaccg cgcatcaccg cgggctcggg
      841 agccaaacaa caccgcacgt tccagccgcg cgccgtagag ggcgtcgagc gcggcgcgga
      901 agcggcgcat gaccgggtcg tcggcgggat cggactgcat cgtgacgaaa agcttagcac
      961 aaagggaggc gtgtgccgat gtgcgatcca atttggcacc gggcctcgaa cgggtggcac
     1021 gcataacgac gcccgacaat gatcgctcca cgcgactcgt tccctgcccg ccgagttgag
     1081 cgctgttcgg agcaccaccc catttcgccg cggtggatcg gaaagtaatc aagcgcatcg
     1141 cggagtttcg cggtgtttgc tcggagtttc tcggaggcgt gccggatttg acctgcggat
     1201 gcgatgccaa ttgcgggcat tccgcacagc cggcgagagg cagtcacggt actggatcca
     1261 accggctgaa atttcctctc cgcgagcctc cgcgcgaact caacgaaact ccgcgccatt
     1321 cttgatcgct ttcccgccga cggattcacg gatcgtgcat ggtcctgcgc gggcgaaacg
     1381 acgggatgca acggacaacg ccagcagagc ggctgccgtt gagccggttg aagatgattg
     1441 tcgcggcagt gtcgacaacc cattgacgga cgacccggga gttccttata tcaaggtcct
     1501 tcccgaattt cgggcgactg cgcacatgcg caccacgccc cgaaccagaa aattccgatc
     1561 ggccgcgaac ccctgggcat ccacgcccga aatccgttcc ggctccccca cagcaccctc
     1621 acgtccaggc atccctctca tgcaccttgc ggaactgaaa cagaaaaccc cagccgaact
     1681 ggtgaatttc gccgaatccc tccagatcga gaacgcatcc tccctgcgca agcaggacat
     1741 catgttcgcg atcctgaaaa acctcgccga caacgaccag ccgatccagg gcgacggcac
     1801 cctcgaaatc ctctccgacg gcttcggctt cctccgtagc ccggaggcga actatctcgc
     1861 cggtcccgac gacatctatg tcagccccag ccaggtccgc cgcttcgggc tgcgcaccgg
     1921 cgataccgtc gacggccaga tccgcgcccc ccgcgacggc gaacgctatt tcgccctgtt
     1981 gaaggtggac gcggtcaatt tcgagccacc cgacgccgtc cgccatcgcg tcaacttcga
     2041 caacctgacg ccgctctacc ccgaagaacg cctgaagatg gaaacggaga cattccagtc
     2101 cgtcgccaag ggaccgacca aggatttcac cccaagggtg atcgacctca tctcccccgt
     2161 cggcaaaggc cagcgcgcac tgatcgtggc acctccgcgc accggcaaga ccgtcatgct
     2221 gcagaacatg gccgccgcca tcgccgccaa ccaccccgaa gtcttcctga tcgtgctgct
     2281 gatcgatgag cggccggaag aagtcaccga catggcgcgc agcgtgaagg gtgaggtcat
     2341 cagctccacc ttcgacgaac ccgccacccg ccacgtgcag gtcaccgaaa tggtgctgga
     2401 aaaagccaag cgcctggttg agcacaagcg cgacgtggtc atcctgctgg acagcatcac
     2461 ccgcctcgcc cgtgcctaca acaccgtggt gccgtcgtcg ggcaaggtgc tgaccggcgg
     2521 tgtcgatgcc aacgccctgc aacgtccgaa gcgcttcttc ggcgccgccc gcaatatcga
     2581 ggaaggcggc tcgctcacca tcatcgccac cgccctgatc gacaccggca gccgcatgga
     2641 cgaggtgatc tttgaagagt tcaagggcac cggcaactcg gaaatcatcc tggaccgcaa
     2701 gctgtccgac aagcggtcgt tccccgccat cgacatcacc aagtccggca cccgcaagga
     2761 agaactgctg gtcgagcgtg gcacactgac caaaatgtgg gtgctgcgcc gcatcctcaa
     2821 cccgatgggc accgtcgacg cgatggagtt cctgctggac aagctgaaat acagcaagac
     2881 caacaacgat ttcttcgacg cgatgaatac ctgaccgccg cgcaggcccc gtcgctacga
     2941 tggggcctgg aattccaccc tgatgtgcga cggctcacgg atcggatcgg cagaaccgag
     3001 ttcaaaccga agttccgccc cgtcacgtcc gacaagcctg aacccggctt ttgcgaagac
     3061 atcgcggcac accatgttgt cctcggtctc ccgcaagcaa gcgaccgtcg ccgcacgcgg
     3121 atgttccgaa cgcaactggg caatggcctt cgccacggca aattgctcga tctccatgcc
     3181 cagcacacgg cagctcatca cgaactgcac gatttccggc ccgctcgcga acagcgtgcc
     3241 gatcagccca taatccgcga acttgtcctt cgccctgaac gccgcgatac gcccgccccc
     3301 ggcgaagaac gcggccatct cggcattggt ccaccgcttg ccggtcgtat tgaactggtt
     3361 ggtcttgttg accagttcca gaacgcgcga aaattccttc tgatcggtgt cgaggatcgg
     3421 cacgaacgtc acgatgctgc ctagac
//
LOCUS       DATAVD010000750         2974 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_817772, whole genome shotgun sequence.
ACCESSION   DATAVD010000750 DATAVD010000000
VERSION     DATAVD010000750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2974
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_817772"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1149
                     /locus_tag="VHX39_14240"
     CDS             <1..1149
                     /locus_tag="VHX39_14240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HEX3992327.1"
                     /translation="AGNDRLGWILPAIFWTALAVGILIKGPVNLMVVGLAALTVSILE
                     RSGRWLLALRPLAGIAWLFVIVLPWFIAIYARVGTAFFVGALGHDMLAKVASAQEAHG
                     APPGLYFLLFFATFYPGSILAALAAPAVWRVRREPAAKFLLAWLVPSWIVFELVVTKL
                     PHYVLPLYPAIAILISGAVESKVLSQRPWLVRGAVWWFIAPILISVAIVTLAIVLAHD
                     PAFPAWPFFALAMVCGLFAWLLYQPDGAELSMVRVTIGGVLLSIGVFSITLPWLRPVF
                     PSVTLANILHHANCADPVAASAGYEEPSLVFLAGTNTRLTDASSAADFLRQGSCRFAF
                     IEARQERVFALRAEAIGLRYERGPSVQGYNIATGKPIDVSVFQSTAGQ"
     gene            1233..1967
                     /locus_tag="VHX39_14245"
     CDS             1233..1967
                     /locus_tag="VHX39_14245"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEX3992328.1"
                     /translation="MQWPMRAYCAVALTLLVVVLSMFLLDSAASSWARTLPPWFIGSF
                     ERITDFGLSGWFLFPFGFVLLSLAAVTSSVWSSKTQAVLAMLTMRFGYVFLAIGVPGL
                     FAAIIKGMIGRARPYVGPKDDPFAYIPFSWNPAYASLPSGHSTTAVAAAVAIGAIWPA
                     ARGVMWIYALLIMFSRVAVLEHHPSDVLAGALVGVVGADLLRRWFAAQGLLFLASDLK
                     AMPGPSFSRVWRAIAEIVRGKSGQKA"
     gene            2017..2148
                     /locus_tag="VHX39_14250"
     CDS             2017..2148
                     /locus_tag="VHX39_14250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992329.1"
                     /translation="MSSSNGPDPAISVVVPVRNEAGNIAPLLAEIAAALQGRVFEVV"
     gene            2161..2766
                     /locus_tag="VHX39_14255"
                     /pseudo
     CDS             2161..2766
                     /locus_tag="VHX39_14255"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
     gene            2756..>2974
                     /locus_tag="VHX39_14260"
     CDS             2756..>2974
                     /locus_tag="VHX39_14260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3992330.1"
                     /translation="MLIDLAHAVGGYLHDVFVTRLDWWVILGFVAQGLFTMRFLVQWI
                     ASERAGRSIIPLAFWWFSVFGGLLLLVYA"
BASE COUNT          439 a          824 c          952 g          759 t
ORIGIN      
        1 gccggcaacg accggctggg ctggatattg ccagcgatct tctggactgc gcttgcggtc
       61 ggcatcctga tcaagggacc ggtcaacctg atggtcgtcg gccttgcggc gctgacggta
      121 tcgattctcg agcgttccgg ccgctggctt ctggcattac gcccgctcgc cggcatcgca
      181 tggctgttcg ttatcgtgct gccatggttc atcgcgatct atgcgcgcgt cggcactgct
      241 ttttttgtcg gcgcgcttgg ccacgacatg ttggcaaagg ttgcgagtgc ccaagaggcc
      301 catggcgcgc ctcccggtct ctatttcctt ctgttctttg caacctttta tccgggctcg
      361 attcttgccg cacttgcagc gccggcggtt tggcgcgtgc gccgggagcc ggccgccaaa
      421 ttcctgctgg cttggctggt gccgtcatgg atcgtgtttg aactcgttgt gaccaagctg
      481 ccgcactatg tgctgccgct ttatccggcg attgccattc ttatttcggg tgcggtcgaa
      541 tcaaaggtgt tgtcgcagcg gccgtggctg gtccggggcg cagtgtggtg gttcatcgcg
      601 ccgatcctga taagcgtcgc tatagtaact ctcgctattg ttctcgcaca cgatccggca
      661 tttccggcat ggccgttctt tgcgctagcc atggtgtgcg gattgtttgc gtggctgctt
      721 tatcagcccg atggtgcaga actttccatg gtgcgggtca ctattggcgg ggtgttgctg
      781 tcgattggcg tgttttccat aacgctgccg tggctgcggc cggtatttcc cagcgttaca
      841 ctcgccaaca ttctccatca cgcgaattgc gcagaccccg tggcggcgag tgccggttat
      901 gaagagccca gtttggtgtt tctcgccggc accaatacac gcctgaccga tgcttcaagc
      961 gccgccgatt ttctgcggca aggctcctgt cgttttgctt ttatcgaagc ccgacaggag
     1021 agggtgtttg cacttcgcgc ggaggcaatc gggcttcgtt atgagcgtgg acccagtgtt
     1081 cagggctaca atatagcgac gggcaagccg atcgatgttt ccgtttttca atcgacggct
     1141 ggccagtgaa cgcttcggcg ttgccgcgca atataggcaa ttctttcgcg ctatgggcgc
     1201 gcgtactttt tcgtgcgcgg caaaggcgcg ttatgcagtg gccgatgcgt gcgtattgcg
     1261 cggtcgcgct gaccctcctt gtcgtcgtgt tgtcgatgtt cctgctcgat tctgcagcga
     1321 gcagttgggc ccgtaccttg ccgccgtggt tcatcggctc gtttgaacgc attaccgact
     1381 ttggcctgtc tggctggttc ttgtttccat tcggctttgt gctgctttct ctggcggcgg
     1441 taacgtcgtc ggtctggtca tcgaagacgc aagccgtgct ggcgatgctt acgatgcggt
     1501 tcgggtacgt gttcctggcg atcggtgtac cgggcctgtt cgcagccatc atcaagggga
     1561 tgattggccg ggcgcgccct tatgtaggac cgaaggacga tccgttcgcg tacattccat
     1621 ttagctggaa cccggcgtat gccagcctgc catcgggtca ttccacgacg gcggtagcgg
     1681 cggcggtggc cattggtgct atctggcccg ctgcccgcgg cgttatgtgg atctatgctt
     1741 tgctcatcat gttcagtcgg gtcgccgtac ttgaacatca tccaagcgac gtgttggccg
     1801 gtgcattggt cggggtggtg ggcgccgatc tgctccgccg ctggtttgcg gcgcaggggc
     1861 tcttgttctt ggcgtctgat ctgaaggcta tgccagggcc atcgttttcc cgggtttggc
     1921 gggctattgc cgagatcgtc cgaggcaaaa gcgggcaaaa ggcttgaaat tccgtggggt
     1981 tgaacccttt cgggatgagc tttagaagct tgcggcatgt cgtcgagcaa cgggcccgat
     2041 cccgcaatct ccgtggtcgt gccggtgcgc aacgaagccg gcaacatcgc gccgctgctt
     2101 gccgagattg cggccgcgtt acagggccgc gtcttcgagg ttgtttaagt caacgacggc
     2161 tctacagatt ccacggatca ggaattgcgc ggcctgatgg cgcagcattc ctggctgcgg
     2221 cagctgcggc attctcaatc ctgcgggcaa tcggctgcgg tgcggactgg cgtagctgca
     2281 tcgagagcac cggtggttgt cacgcttgac ggcgatggac agaacgatcc cgcctttctt
     2341 cccgctttga tcgccgagct tgaaaaagat ggaccacgcc ggggcctcgt ggctggtcag
     2401 cgaattgggc gcaaagcgac cggtttcaag aggtttcagt cacgcgtcgc caatgcagta
     2461 cgcggtgcag ttcttaagga tggcacgcgg gataccggat gcgggctgaa ggcatttcgt
     2521 cgggatgcgt tcctggcgct gccacatttc gatgggctgc accgtttcat gccggcgctg
     2581 atgcgccgag atgggttcgg tatcggatat gtcgacgtcg tcgatcggcc gcgcggtcac
     2641 ggcgtgtcga attacggatt ctgggatcgg ctgtggatcg gcattcttga tctgggcggg
     2701 gtatggtggc tgatccggcg cagaaaacgc gttcctgacg cgcaggagat aacccttgct
     2761 cattgatctg gcgcacgcgg tcgggggcta cctccacgat gtattcgtga ccaggctcga
     2821 ttggtgggtg atcctgggct ttgtcgccca aggattattc acgatgcgct tcctcgtcca
     2881 atggattgca tccgaacgcg ccggccgcag tattattccg ctggcttttt ggtggttttc
     2941 ggtcttcggc ggcctgttgc ttcttgtgta tgca
//
LOCUS       DATAVD010000751         5146 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_256724, whole genome shotgun sequence.
ACCESSION   DATAVD010000751 DATAVD010000000
VERSION     DATAVD010000751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5146
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_256724"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..807)
                     /locus_tag="VHX39_14265"
     CDS             complement(<1..807)
                     /locus_tag="VHX39_14265"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX3992331.1"
                     /translation="METEPARMTAAQASSLIQSRKMSSEELVRSCLARIAARDTEVKA
                     WLRLDPDYVIRRARELDKLPSKGPLHGLPWGVKDVIDTADYPTTQNSPIYDEFRVGRD
                     AAPVAVVRGSGSLILGKTDTVEFASFGRKALTRNPYNPAHTPGGSSSGSGAAVGDFQV
                     PLGFGTQTGGSHIRPASFNGIYGMKPSWNRVSREGLRMSSITLDTIGWYGRCVEDLII
                     VAEAFRIARDPIPVSVKGLRVGLCRSPVWREIEPAGELALSTAARRLADAG"
     gene            complement(819..1760)
                     /locus_tag="VHX39_14270"
     CDS             complement(819..1760)
                     /locus_tag="VHX39_14270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEX3992332.1"
                     /translation="MTTHTLRASPETVRIGVFNALFPPVMTIESGDRVEVQCVSGRES
                     VMPPADAPFTIPPELSAIMAANPGVQAGHIVTGPIAIAGAMPGDMLEIRIEKIIPGAD
                     WGYNLIRPLAGTLPEDFHETTLMHIPVDSGRGVCSLPWGTELNLAPFFGVMGVAPPPE
                     FGTIMSKEPRIHGGNLDNKEMTAGSTLFLPVWVPGANFSVGDGHGVQGDGEVCVTALE
                     MCLTGTFTFILHKGMALKMPRAETPTHFISMGLNEDLDQAMKQALREMIAFICSRSNL
                     SREQAYSFCSLAVDFHVTQTVNGEKGVHGMLKKGLLF"
     gene            complement(1774..3162)
                     /locus_tag="VHX39_14275"
     CDS             complement(1774..3162)
                     /locus_tag="VHX39_14275"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX3992333.1"
                     /translation="MSIPTIAEAAALIAAKKLSPVELTKACLNRMHATEATLHAFVLP
                     TEDRAMADARAAEAAIMRDGPRGPMHGIPIGLKDIVDTAGIETTCGSKILAGNVPEQD
                     AACAARLAAAGTVLMGKLTTHEFADGGPSFDLPKPPAHNPWNPEHFTAGSSSGTGAAV
                     AAGVILCGIGTDTGGSIRGPAALCGIAGLKPTYGLVSRAGVAPAAFSLDHIGPMAWTA
                     EDCAIMLQTLAGHDPADPASASHSVPHFRDALTGHLKDVRIGVIRHFHEHDYVVEPAV
                     QTGIDNALAVFRSLGATVGEVTVSPLQDWHACGSLISIVERAAAYEEWAQTRLGDFSE
                     RVQRRLHLGALVSGVDYVQAVRRRRELRSELQAAMRDLDVVITAGAPGEAARMDAIPK
                     WDLFDKPNFTMPFNVTGYPALCVCSGFGPGGLPVSVQIVGKPFQDAMVLRAGDAFEKA
                     TQSRSRRPALVA"
     gene            complement(3159..3356)
                     /locus_tag="VHX39_14280"
     CDS             complement(3159..3356)
                     /locus_tag="VHX39_14280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992334.1"
                     /translation="MPPTLTDPALEYLLQSAGLTLTDAEKADLKSIHDGLAAMKVRVR
                     QKRGRMAELAHSYGFTPEDLT"
     gene            3473..4648
                     /locus_tag="VHX39_14285"
     CDS             3473..4648
                     /locus_tag="VHX39_14285"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX3992335.1"
                     /translation="MTDSLNAFVPGPRCQVTGAASDALAGLTFAVKDLIDIAGVPTGG
                     GNPDWERSHPVPTQHAWIVGQLLQAGASVIGKTATDEVSLGILGENPFTGTPLNPAAP
                     ELVPGGSSSGSASAVAGGVCDFALGTDTGGSVRVPASFCGLFGIRPTHGSVDFSGVLV
                     QAPSSDTVGWFARDAGTFARVCEAVFGAPIPTSLPDRLIVATDTFAFADPEVSAALEP
                     MVNRLASVIGDRRDRILAPQGLSVWQAAQRCLQQSEAWQTFQPWIDAVSPRFAFHVAR
                     GLTIGSQITDAERTRAALMREEARGRVRSLLPPGTILCLPTTPFPAPRRGLSISQLAF
                     PRERISSLTCLGGLTGSPQVNLPGALVSGAPVGLSIVGPRGSDLELAAVARAFAAAP"
BASE COUNT          959 a         1731 c         1524 g          932 t
ORIGIN      
        1 gccggcgtcc gccaaacgcc gcgctgccgt gctcaaggcc agttcgccgg ccggttcgat
       61 ctcccgccag accgggctac gacacagccc aacccgcaat cctttgaccg agaccgggat
      121 cgggtcgcgt gcaatacgga acgcctcggc aacgatgatc agatcctcga cgcaacggcc
      181 gtaccaaccg atcgtatcca acgtaatcga cgacatccgc aagccttcgc ggctgacgcg
      241 attccaactc ggcttcatac cgtagatgcc attgaacgac gccggcctga tatgtgaacc
      301 gccggtctgc gtgccaaagc caagcggcac ctgaaaatcg cccaccgcgg cgcccgagcc
      361 ggacgacgat ccacccggcg tgtgtgccgg attgtaagga tttcgcgtca gtgccttgcg
      421 gccgaacgac gcgaactcga cggtatcggt cttgcccaat atcaacgaac ccgagccgcg
      481 caccaccgcg accggagccg catcgcgtcc aacccgaaac tcgtcgtaaa tgggagagtt
      541 ctgcgtggtc ggataatctg ccgtatcgat cacatccttc acgccccacg gcagcccgtg
      601 caacggccct ttcgacggca gtttgtccag ttcacgagcg cgccggatga cataatccgg
      661 atccagccgc agccaggcct ttacctcagt atcgcgcgcg gcaatgcggg cgaggcacga
      721 ccgcaccagt tcctcactcg acatttttcg cgattgaatc aaggaagacg cttgtgccgc
      781 ggtcatccgg gcgggttcgg tttccatatt cgaactccct agaacagcag gccctttttc
      841 aacatcccgt gcacgccttt ttcgccgttc acggtctgcg tcacatggaa atcgaccgcc
      901 agcgagcaga acgaataggc ctgctcacgc gacagattgc tgcggctgca aatgaacgcg
      961 atcatttccc gcaacgcctg tttcatcgcc tgatccagat cttcattcag ccccatactg
     1021 atgaaatgcg tcggcgtctc ggcccgcggc attttcagcg ccatgccttt gtgcagaatg
     1081 aaagtgaatg tcccggtcag gcacatttcc agagcggtga cgcaaacctc accatcgcct
     1141 tgcacgccgt gaccgtcacc cacggaaaaa tttgcccccg gcacccagac cggcaggaac
     1201 agggtcgaac ccgcggtcat ttccttattg tcaagattgc cgccgtggat gcgcggctct
     1261 ttcgacatga tggtgccgaa ttcaggtggc ggcgccacac ccatcacgcc aaagaacggc
     1321 gccagattca attcggtccc ccagggcagc gaacaaacac cccgcccgga gtctaccgga
     1381 atatgcatca atgtggtttc gtgaaaatcc tccggcaaag tgcccgccag cggccggatc
     1441 aggttgtagc cccagtccgc ccctggaatt attttctcaa tgcggatttc cagcatgtcg
     1501 cccggcatcg cgccggcgat ggcaatcggc ccggttacga tatgaccagc ctgaaccccg
     1561 gggttggcag ccatgatcgc agaaagctcc ggcggaatgg tgaacggcgc atcggcaggt
     1621 ggcatcaccg attcacggcc cgagacgcac tgcacctcga cccgatcgcc cgattcgatg
     1681 gtcatcaccg gcgggaacag cgcattgaac acgccgatcc gcaccgtctc cgggctggca
     1741 cgcagggtat gtgtggtcat gcagaaaccc tccttatgcc accagcgcag gccggcgaga
     1801 ccgcgactgc gtggcctttt cgaacgcgtc gccagcccgc agcaccatgg catcctggaa
     1861 cggcttgcca acaatctgca cgctgaccgg cagaccgccc ggaccgaagc ccgaacaaac
     1921 gcacaatgcc ggatagcccg tcacattgaa cggcatggta aagttcggtt tgtcgaacag
     1981 atcccatttc gggatggcat ccattcgcgc agcctcgccc ggcgcgccgg cagtaatcac
     2041 cacatccagg tcccgcatcg ccgcctgcag ttccgaccgc agctcgcgac gccgccgcac
     2101 cgcctgcacg taatcgacgc cggataccag cgcgcccaga tgcagccgcc gctgcacgcg
     2161 ctcggagaaa tcgccaagcc tcgtctgcgc ccattcctca taagccgcgg cacgttcgac
     2221 gatggaaatc aacgagccgc aggcatgcca gtcctgcaac ggcgaaaccg ttacttcccc
     2281 cactgtcgcg ccaagcgagc ggaacaccgc cagagcattg tcgatgccgg tctgcaccgc
     2341 gggttcaacg acgtaatcgt gctcgtggaa atgccggatc acaccgatgc gaacatcctt
     2401 caggtgaccg gtcagcgcgt cccgaaaatg cggcaccgaa tgcgaggcac tggctggatc
     2461 ggcgggatcg tgacctgcca aggtctgcag catgatggcg caatcctcgg cggtccacgc
     2521 cattggcccg atatggtcca ggctgaacgc cgccggcgcg accccggcgc gcgacaccag
     2581 cccgtaggtc ggtttcaacc ccgcgatgcc gcacaacgcc gccggcccac ggatcgagcc
     2641 gccggtatcg gtgccaatcc cgcacaggat cacgccggca gcgaccgccg ctccggtgcc
     2701 gctgcttgat ccggcagtga aatgttccgg gttccacgga ttatgcgccg gcggcttcgg
     2761 cagatcgaac gacggcccac catcggcgaa ttcatgcgtc gtcagcttgc ccatcagcac
     2821 ggtgccggcg gcggccagcc ttgccgcaca ggccgcatcc tgttccggca cattgcccgc
     2881 caggatcttc gatccgcagg tcgtttcgat accggcagtg tcgacgatgt ccttcaggcc
     2941 gattggaatc ccgtgcatcg ggccgcgcgg gccatcgcgc atgatggctg cctcggccgc
     3001 ccgggcgtcc gccatggcgc ggtcctcggt cggcagcacg aaagcgtgca acgtcgcctc
     3061 ggttgcatgc atccgattca ggcaggcctt ggtcagctca accggcgaga gctttttcgc
     3121 cgcaatcaat gccgccgcct cggcgatggt cgggatactc atgtcaggtc ctccggcgta
     3181 aagccgtagc tgtgcgcaag ctcggccatg cgcccacgct tttgccttac ccgcaccttc
     3241 attgccgcca gaccatcgtg gatcgatttc aggtcggctt tttctgcgtc ggtcaatgtc
     3301 aggccggcgc tctgcagcag atattcgagg gcgggatcag tgagcgtggg tggcatgtcg
     3361 aaaactcctc acggtcggtc gactggacct gtcagcaaaa accaggccat tacggtacga
     3421 tcaatcctgc ctctaacacc agagggcggc cggtaatcgg accgcagcag caatgaccga
     3481 cagcctgaac gccttcgtgc ctggcccgcg ttgccaggtc acgggtgccg ccagcgatgc
     3541 tctcgccggc cttacgttcg cggtgaaaga cctgatcgat atcgccggcg tgccgaccgg
     3601 cggcggcaat ccggactggg agcgcagcca tccggtgccg acgcagcatg cctggatcgt
     3661 cgggcaattg ttgcaggccg gcgcctccgt catcggcaag accgcaaccg acgaagtgtc
     3721 tctcggcata ttgggtgaga acccattcac cggcacgcca ctaaatccgg cggcaccgga
     3781 gcttgttccc ggcggctctt cgtcaggctc cgcatctgcg gtcgcgggcg gcgtatgcga
     3841 tttcgctctc ggcacggata ccggcggttc ggtgcgcgtc ccggcaagtt tctgcggcct
     3901 gtttggcatc cggccaacgc acggaagcgt cgatttttcc ggggtgctgg tgcaggcgcc
     3961 atcgtcggac acggtgggtt ggtttgcccg cgacgccgga acatttgccc gtgtttgcga
     4021 agccgtgttt ggcgcaccaa tccccacctc gttgccggac cggttgatcg tggcgaccga
     4081 tacgtttgcc tttgccgacc ccgaggtttc cgctgcattg gagccaatgg tcaaccggct
     4141 cgcctcggtg atcggcgacc gtcgcgaccg catcctggcg ccgcaaggcc tgtcggtctg
     4201 gcaggccgcg caacgctgtt tgcaacaaag cgaggcgtgg caaacgtttc agccctggat
     4261 cgacgccgtc agtccgcggt tcgcctttca tgtcgcgcgc ggactgacaa tcggttcgca
     4321 gatcaccgat gccgagcgca cgcgtgccgc tctgatgcga gaggaagcgc gcggccgggt
     4381 gcgttcgttg ctgccgccgg gcactatcct gtgcctaccg acgacgccgt ttcccgctcc
     4441 gaggcgaggt ctgtcgatct cgcaactggc attccctcgg gagcggattt cgtcactgac
     4501 atgccttggc ggcctgaccg gatcgccgca ggtcaatctg ccgggcgcac ttgtctccgg
     4561 cgccccggtg ggattgtcga tcgtcgggcc tcgtggatcc gacctggaac tggcggcagt
     4621 ggcacgggca tttgcggctg cgccatgacc tgcgcgaatt gtgcgcacgg gcaacgcgat
     4681 ttcggggcag ttgccgttgg ccggtgcgca acgccgcttg cttcgcccca atgccaaaca
     4741 ggcacgctcc ggggagagcg tgcctgctcg atagtcatga gaacgcccgt gggcgacacc
     4801 acagccggct catcataata ccgcacgaag gttaacggaa agttaccaaa atacgcggac
     4861 agacgcgcct catagagacg cgcctgccgg ggggatagag ccggtcgcgg gagagaccaa
     4921 acgaccgaca cccccgacat tggaccctcg atggttgcag tgttgttact ctgacggagt
     4981 tccgaggtgt tggtaattta acctgcgagg acgcaatgcg tggcaaccgc catcgtaacg
     5041 ctgccataca tcagccccgc gcgccgattg tgtcccggcc gaggctgctt gtgccgctcg
     5101 ccagtgtccg tccccatcga tgcgccggcg tttccacgta ccgatg
//
LOCUS       DATAVD010000752         4408 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3608502, whole genome shotgun sequence.
ACCESSION   DATAVD010000752 DATAVD010000000
VERSION     DATAVD010000752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4408
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3608502"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1893)
                     /locus_tag="VHX39_14290"
     CDS             complement(<1..1893)
                     /locus_tag="VHX39_14290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HEX3992336.1"
                     /translation="MTLPAKLMWAGIVVLGAISFAIVALTRGEPVNAAWLVVAAVCIY
                     FIAYRFYALFITGKVFGVDPKRSTPAYRHNDGLDYVPTNRYVLFGHHFAAIAGAGPLV
                     GPVLAAQMGYLPGTLWILAGVVFAGAVQDMTVLFLSTRRDGKSLGDMIRSEMGPVAGG
                     IAGVGILLICIIVLSVLALVVVNALKGSPWGTFTVFCTVPIAVIMGIYSRFIRPGRIA
                     EMSVIGAVLLLLALIYGRTVSETPSLAAWFNIGGETLALVVIGYGFVASVLPVWLLLA
                     PRDYLSTFLKVGTILLLTIGVMIVHPDLQMPAVTRFIDGTGPVWAGSLFPFLFITIAC
                     GSVSGWHALISSGTTPKMIENESQIRFIGYGGMLMESLVAIMAMIAASVIHPGIYFAM
                     NSAAGVIGNDPGYAAQVISAWGFAVTPDMLTQMAHNVGETTIMSRTGGAPTLAVGMAS
                     ILSSFLGGSALAGIWYHFAILFEALFILTTVDAGTRVCRFMIQDLIGNVIPTFRATES
                     WANNIVGSGIACALWGYFLYQGVIDPLGGIWTMWPLFGSANQMLAAIALILCTVVLFK
                     MKRERLAWVTIVPTVWLVLCTVTAGLEKVFNPNPAVGFVSHALKFGAAASAGQVLAPA
                     KTLHEMG"
     gene            2358..4001
                     /locus_tag="VHX39_14295"
     CDS             2358..4001
                     /locus_tag="VHX39_14295"
                     /inference="COORDINATES: protein motif:HMM:NF009410.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HEX3992337.1"
                     /translation="MNDRHQDMSPLVDLTRRRVTGPSRSSHPVYVDLLPPCNHACPAG
                     EDIQAWLALAQAGKYREAWESLVHDNPMPAIHGRVCYHPCETACNRAELDASVSIHAV
                     ERFLGDLADAENWPFKVTARSSGKRVLVIGGGPCGLSAAYHLARLGHKVEIRDSGPVP
                     GGMMHFGIPAYRLPRADLAREIQRIKAMGVTIVPDHKVTDVQAEIVAGGFDAGFLAIG
                     ADVGKHVDIPARDAVRVLDAVSLLHDVQTGQTPLLGRRVIVYGGGNTAMDAARTVRRL
                     GADEALIVYRRDRAHMPAHDFEADEVIEEGIKIKWLTTIKEIVGPQLTVEIMELDDQG
                     RPRPTGRFETLPADAVVLALGQSTDSSFLRNVPGLTFGSDGAVVVGTNMMTGHPGLFA
                     GGDAIEGEKSVTIAVGHGKRAARNIDAWLRETTYVASVKAPIVTFPMLRLPVYSDADP
                     HPQRTLEAASRISGFEEVVQGLDAKAARHEAQRCLSCGNCFECDNCFAACPETAIVRL
                     GPTRGYQVNLDLCTGCAVCVEQCPCCAMEMVPERGAVAP"
     gene            3998..>4408
                     /locus_tag="VHX39_14300"
     CDS             3998..>4408
                     /locus_tag="VHX39_14300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008854642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HEX3992338.1"
                     /translation="MSTRKTMDGNTAVAHVAYRVNEVCAIFPITPSSTMAELADEWVA
                     DGVKNIWGNVPVVQEMQSEGGAAGAVHGALQSGALTTTFTASQGLMRMLPNMFKIAGE
                     LNATVFHVAARSLATSALSIFGDHADVMAVRPTGF"
BASE COUNT          890 a         1384 c         1388 g          746 t
ORIGIN      
        1 gcccatttcg tgcagtgttt tggccggcgc caggacctgg ccggcagacg ctgcggcacc
       61 aaacttcagc gcatgactga cgaagccgac cgccgggttt ggattgaata ccttctccag
      121 gccggcggtc acggtgcaaa gcaccagcca gaccgtaggc acgatggtga cccaggccag
      181 ccgctcgcgc ttcatcttga acagcacgac ggtgcacagg atcagcgcga tcgccgccag
      241 catctggttc gcactgccga acaacggcca catcgtccag atgccgccca gaggatcgat
      301 aacgccctgg taaaggaagt agccccataa agcgcaggcg atgccggagc caacgatgtt
      361 gttggcccat gactcggttg ctctgaacgt cgggatcacg ttgccgatca ggtcctggat
      421 catgaaacgg caaactcgtg tgccggcatc gacggtggtc aggatgaaca gcgcctcgaa
      481 caggatggcg aaatggtacc agatgccggc cagcgccgaa ccgccgagga agctggagag
      541 aatgctggcc atcccgactg ccaatgtcgg tgcgccgccg gtgcgcgaca tgatcgtcgt
      601 ttcacccacg ttatgcgcca tctgggtcag catatccggg gtaacggcaa agccccaggc
      661 tgagatcacc tgcgccgcgt atccgggatc gttgccgatc acgccggccg cgctgttcat
      721 cgcgaagtag atgccgggat ggatcaccga agcagcgatc atcgccatga tggcgaccag
      781 tgattccatc aacattccgc cataaccgat gaaccggatc tgactttcgt tctcgatcat
      841 tttcggcgtg gtgccggagc tgatcagcgc gtgccagccg gacaccgatc cgcaggcaat
      901 cgtgatgaac agaaacggga acaggctgcc agcccagacc ggtccggtgc cgtcgatgaa
      961 ccgtgtgacc gccggcattt gcaggtccgg atgcacgatc atgacgccga tcgtcagcag
     1021 caggatggtg ccaactttca ggaacgtcga caaatagtcg cgcggcgcca gcaacagcca
     1081 gaccggcaac accgaggcga cgaagccgta tccgatgacg accagcgcca gcgtttcacc
     1141 gccgatattg aaccatgccg cgagcgaagg tgtctccgac acggtgcgtc cgtagatcag
     1201 cgccagcagc agcagcaccg cgccgatgac cgacatctcg gcaattcggc cgggccggat
     1261 gaaccggctg tagatgccca tgatcacggc gatcggaacg gtgcagaaca cggtaaaggt
     1321 gccccatggg ctccccttca gcgcattcac caccaccagg gcgagcaccg atagcacgat
     1381 gatacagatc agcaggatcc cgacgccggc gatgcctccg gcaaccggcc ccatctccga
     1441 gcggatcata tcgcccaggg atttgccgtc gcggcgggtc gagaggaaca gcacggtcat
     1501 gtcctgcacc gcgccggcga agacgacgcc ggccaggatc caaagcgtgc cgggcagata
     1561 gcccatctgt gccgcaagca ccggcccgac cagcggcccg gcgccggcaa tggccgcgaa
     1621 atgatggccg aacagcacgt accgattggt cggtacataa tcgaggccat cgttgtgccg
     1681 atatgccggg gtcgatcgct tcggatcgac accgaatact ttcccggtga tgaacagcgc
     1741 gtaaaatcgg taggcgatga agtagatgca cactgcggcg acgaccagcc aggcggcatt
     1801 caccggttcg ccacgcgtca gtgcgacgat cgcaaaagag attgcgccga gcacaacgat
     1861 cccggcccac atcaatttcg ctggtagagt catggttgca atcctacgac cggtcgcgac
     1921 ccgtggatcg tcaacctgga tgaccccccg gacgcaaacg gccgcatcgt gccgatcgcc
     1981 agattgcagg tcccatgttt ggcacccggt cgcattgatc tggatcaggg gtcgcactgc
     2041 tcgaacgctg catcggcggc aacccgttgc cggcacgaag tggtggttca tccccacaaa
     2101 caactgacat ggtgcatgaa accggacgtt gctgctgcgt cctgcataca tgcgtggtca
     2161 gttcgttgac ccaggtcaat gcggagcagc tacggccagc ccatgaggca aacgcaaatc
     2221 atctctctga gggtctgcgc cgggggacgc aaggtccgct acgacagccc tgcgacgaac
     2281 aatggggcaa ccgtctgagc cggccggcgg cgtaagtcag cggctgcacc gcccatccca
     2341 tcatccaacg aggcaccatg aacgatcgcc accaagacat gagcccgctg gtcgacctca
     2401 cccgccgccg cgtcaccggg ccgtccagaa gcagtcatcc ggtctatgtc gatctgctgc
     2461 cgccgtgcaa tcacgcctgc ccagcgggcg aggatattca ggcatggctg gcgctggctc
     2521 aggcgggaaa ataccgggag gcgtgggaaa gcctggtgca tgacaatcca atgccggcga
     2581 tccacggcag ggtttgctat catccctgtg aaaccgcctg caaccgggcg gaactcgatg
     2641 cgtccgtcag catccatgcg gttgagcgct ttctcggcga cctcgccgac gcggagaact
     2701 ggccgttcaa ggtgacagcc cggagcagcg gcaaacgcgt tctggtgatt ggcggcggtc
     2761 cctgcggatt gtcggccgcg tatcacctcg ctcgccttgg ccacaaggtt gagatccgcg
     2821 actcgggacc ggtgcccggc gggatgatgc atttcggcat tcccgcctac cgtctgccgc
     2881 gagccgacct cgcgcgggaa atccagcgga tcaaggcgat gggcgtgacc atcgtgcctg
     2941 accataaagt caccgacgta caggcggaaa tcgtcgcggg cgggttcgat gccggcttcc
     3001 tcgccattgg agcagatgtc ggcaagcacg ttgacatacc ggcgcgtgac gccgttcgcg
     3061 tgctcgacgc ggtatcgctg ctgcatgacg tgcaaaccgg gcagacgccg ctgctcggcc
     3121 gccgggtgat cgtttacggc ggcggcaaca ctgcgatgga tgcggcgcga accgtgcgcc
     3181 ggctcggcgc ggatgaggcg ctgatcgttt accggcgcga tcgcgcccat atgccggcgc
     3241 acgacttcga ggccgacgag gtcatcgaag agggcatcaa aattaaatgg ctcaccacga
     3301 tcaaggaaat cgtcggaccg caactgaccg tcgagattat ggaactcgat gaccagggac
     3361 ggccgcgacc gaccggacgg ttcgagacgc tcccggccga tgccgtcgta ctggcgcttg
     3421 gccaatccac cgacagcagt ttcctgcgga acgtgcctgg cctgacgttc ggcagcgatg
     3481 gggcggtggt tgtcggaacc aacatgatga ccggccatcc gggtctgttc gccggcggcg
     3541 acgcgatcga aggcgagaaa tccgtgacca tcgcggtcgg ccacggcaag cgcgcggccc
     3601 gcaacatcga tgcctggttg cgtgagacga cctacgttgc ctcggtgaag gccccgatcg
     3661 taaccttccc catgttgcga ttgccggtgt acagcgacgc cgatccgcac ccgcaacgga
     3721 ctctggaagc ggccagccgg atcagtggct tcgaggaggt tgtgcaaggc ctcgatgcca
     3781 aagccgcccg tcatgaagcg caacgatgtc tgtcctgcgg taattgtttc gaatgcgata
     3841 attgcttcgc cgcctgcccg gagacggcga tcgttcggct cggcccgacc cgcggctatc
     3901 aggtcaattt ggatttgtgc accggctgcg ctgtttgcgt cgaacaatgt ccctgctgcg
     3961 ccatggaaat ggtgcccgaa cgtggagccg tcgcgccatg agcacgcgaa aaaccatgga
     4021 cggcaacacg gccgtcgctc atgtcgcgta tcgcgtcaac gaagtgtgcg cgatttttcc
     4081 gattaccccg tcatcgacca tggccgagct cgccgatgag tgggtcgccg atggggtgaa
     4141 gaatatctgg ggcaacgtgc cggttgtgca ggagatgcag tccgagggcg gagcagccgg
     4201 cgccgtgcat ggcgcgctgc aatccggcgc gttgaccacg acgttcacgg cctcgcaagg
     4261 cctgatgcgg atgctgccga acatgttcaa gatcgccggg gagttgaacg cgacggtgtt
     4321 ccatgtcgcg gcacgctcgt tggcaacctc ggcgctgtcg atttttggcg accatgccga
     4381 cgtcatggcg gtgcggccga ccgggttc
//
LOCUS       DATAVD010000753         3958 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2302186, whole genome shotgun sequence.
ACCESSION   DATAVD010000753 DATAVD010000000
VERSION     DATAVD010000753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3958
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2302186"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..566)
                     /locus_tag="VHX39_14305"
     CDS             complement(<1..566)
                     /locus_tag="VHX39_14305"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3992339.1"
                     /translation="MIRVEPTGAVLGATIHGVDLTQPIPESDFAVILHALGHHGVLRF
                     PDQDLGPGDVSRFSALFGEIQGNPIGPLDQTREFPEVGTLSNLKRNGQYIGSPDAGQD
                     WHTDMTYRDVAGFVNVLYGVRIPMRDARPLGGTEFSNMHMVYDALPADIKARLDGATA
                     THDLAKFWDHMRNNRNSPRPPLTEEQRRR"
     gene            complement(590..1495)
                     /locus_tag="VHX39_14310"
     CDS             complement(590..1495)
                     /locus_tag="VHX39_14310"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3992340.1"
                     /translation="MLTIEPTGAVLGATVHGVDAAKPVSDQDFGQLLAALGRYGVLRL
                     PDQQLDEAGVRRFSQLFGDIQGPSSGPLTADGKELAVVGVLSNIKQNGKYIGAADAGQ
                     DWHTDMSYREVIGFVNVLYGIQIPRRDGIPLGGTEFSNMHAAYEALPDKIKIDLAHAT
                     VTHTFEKFWEHMRQNKNSGRPPMTEEQRRRRPPVVHPLFLRHPITGRKVLYCNPGYSI
                     RINELPQAESDAMLKYFHKHQLQDRFRYTHHWSENDLLVWDHIGTIHRAIADYRPDEI
                     RLMRRCQVMATKVFDPEFTRLAQAA"
     gene            complement(1553..2641)
                     /locus_tag="VHX39_14315"
     CDS             complement(1553..2641)
                     /locus_tag="VHX39_14315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992341.1"
                     /translation="MVTVVARAASWLQAWDSHGIHRTGTAGDQAGAEWLAREAAALGA
                     TVALETFQLNRIDPVECWVECAGARIEGVPVFDSPPTGPSGLNGSIALVRLSPWAVYA
                     PAYRAMRRASDRDGMVIVCQGGELGLALLNAERFREPYGCPTIHVAEMPPSEPLRMTS
                     RYRRTHVDACNVVVTIPGRDPSLHKVVVMTPRSSWWQSTSERGGGLVCWLETLRNLMD
                     TPPLADVVLTANSGHELGHIGLDSFLERRPGWDRPDGAIWVHYGANIGAAGGQLTIQS
                     ANPHLRETTRQALTSFGQPPDTMAPETLVPNGETRDIHRMGGHYVTLVGSNRLFHLPR
                     DRWPHAVDVSAIERIAAGAAAMVRAVAG"
     gene            complement(2872..>3958)
                     /locus_tag="VHX39_14320"
     CDS             complement(2872..>3958)
                     /locus_tag="VHX39_14320"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3992342.1"
                     /translation="TQGEAAVSEPFNRYDLTSARQHGRPGREIRPKSLTVDIHSHAMV
                     PAAADIARPHLSPDPRAAFYTEETRVLGRKQDADRTPFLTDLDRRMQVFDDMGVDAQV
                     ISPAPNQCYYGVPPEVGAQAARAVNEGIAEIARSRRDRIPAAMGSVPLQAGGEAAADE
                     LEYCMTTLGLKGVEVLAHVGDKELSDPSFEPFWAKVEALGAVVFIHPNSFTQPQRFSK
                     HYFSNVIGNPLDTTMALHWLIFDGVLERYPDLKIIASHGGGYLPAYSGRIDHAWGARS
                     DSRGTLPKPPSYYLKKIYLDTIVFTPHQLEAMVKLFGVDKILLGTDYPYDMGEYDPIG
                     HIASVESLSPSDVAAIAGGNAKRLFGL"
BASE COUNT          740 a         1235 c         1251 g          732 t
ORIGIN      
        1 cggcgacgtt gttcctcggt cagcgggggg cgcgggctgt tgcggttgtt gcgcatgtga
       61 tcccagaatt tggcgaggtc gtgggtcgcg gtggcaccgt cgagacgcgc cttgatgtcc
      121 gccggcagcg cgtcatacac catgtgcatg ttggagaatt cggtgccgcc caatggccgg
      181 gcgtcacgca tcggaattcg tacgccatag aggacgttca caaagccggc aacatcgcga
      241 tacgtcatat cggtgtgcca gtcctggccg gcgtcgggac tgccgatata ctggccgttg
      301 cgcttcaggt tcgacagtgt cccaacctcg ggaaattcgc gggtctgatc gagcgggcca
      361 atcggattgc cctgaatttc gccaaacaac gccgaaaacc ggctgacatc gccgggcccg
      421 aggtcctgat ccggaaaccg caacacgccg tgatggccaa gcgcgtgcag aatgactgcg
      481 aagtcggatt ccgggattgg ctgggtcaga tcgacgccat ggatggtcgc gcccagtacg
      541 gcgccggtgg gttcaacgcg gatcattggg gagctccgaa aagaaggctt catgccgcct
      601 gcgccagccg ggtaaattcg ggatcgaaca ctttggtcgc catgacctgg cagcgccgca
      661 tcagccgtat ctcgtccggc cggtaatcgg caatcgcgcg atggatggtg ccgatatgat
      721 cccacaccaa cagatcgttc tcgctccagt gatgcgtgta acgaaagcgg tcctgcagct
      781 gatgcttatg gaaatatttc aacatcgcat cgctttccgc ctgcggcagt tcgttgatgc
      841 ggatcgagta gccgggattg caatacaaca ctttccgccc ggtgatcgga tggcgcagaa
      901 acaacggatg cacgaccgga gggcgacggc gccgctgttc ctcggtcatc ggcgggcggc
      961 cgctgttctt attctgacgc atatgctccc agaatttttc gaacgtgtgc gtaacggtgg
     1021 cgtgcgccag gtcgatcttg atcttgtccg gcaacgcctc ataagcggcg tgcatgttgg
     1081 agaactcggt gccccccaga ggaatcccgt cgcgccgtgg aatttggatc ccgtacagca
     1141 cgttcacgaa accaatcacc tcgcgatacg acatgtcggt gtgccagtcc tgaccggcgt
     1201 cggcagcacc gatgtatttg ccgttttgct tgatgttgga caggaccccg accaccgcca
     1261 gctctttgcc gtccgcggtc agcgggccgg aagatgggcc ttgaatatcg ccgaacaatt
     1321 gggaaaaccg gcgtacaccg gcctcatcca actgctggtc cggcaggcgc aacacgccat
     1381 atcggccgag tgctgccagc agttggccaa aatcctggtc cgagaccggc ttcgccgcat
     1441 ccacgccgtg caccgtggca cccaggacgg cgccggtggg ttcaatggtg agcatcgttt
     1501 gcctccgttg tggggcattt tacgctgcaa gccggctgcg gtccaatggg acttatcccg
     1561 ccacggcgcg caccatcgcc gcggcgccgg cggcaatccg ttcgatcgcc gaaacgtcga
     1621 ccgcgtgcgg ccaacgatcg cgcggcaagt gaaacagccg gttgctgccg accagggtga
     1681 cgtaatgccc gcccatgcga tggatgtccc tggtctcgcc attcggcacc agggtttcgg
     1741 gcgccatcgt gtcgggcggc tggccgaagg aggtcagcgc ctggcgggtc gtctcgcgca
     1801 ggtgggggtt ggcggactga atcgtcagtt gtcccccggc ggcaccgata ttggcgccgt
     1861 aatgcaccca tattgcaccg tccggacggt cccagccagg ccgccgctca agaaatgagt
     1921 caagaccgat atggcccagt tcatggccac tgttggcggt caggacgaca tcggccagcg
     1981 gtggcgtatc cataagattc cgtaacgttt ccagccagca caccagacct ccgccacgct
     2041 ccgaggtcga ttgccaccag gacgaccgcg gcgtcatcac cacgacttta tgaagggacg
     2101 gatcacggcc ggggatggtg accacaacgt tgcaggcatc gacatgggtg cgccggtaac
     2161 ggctggtcat gcgcaacggc tcggacggcg gcatctcggc cacgtggatc gttgggcatc
     2221 cgtacggctc acgaaatcgt tccgcattca gcaaagccag accgagttcg ccgccctggc
     2281 aaacgatgac catcccgtcg cgatcggagg ctcgccgcat ggcacgatag gcgggcgcgt
     2341 aaaccgccca gggtgagagg cggacgaggg cgatggaacc attgagaccg gacggaccgg
     2401 ttggcggcga gtcgaaaacc ggcacgccct cgatccgcgc tccggcgcat tcgacccagc
     2461 actccactgg atcgatgcgg ttcaactgaa acgtctccag ggccacggtg gcgcccaatg
     2521 cggcggcctc gcgtgccaac cattccgcgc cggcctggtc gcccgccgtg ccggtgcggt
     2581 gaatgccgtg agaatcccac gcctgaagcc aggacgcagc gcgcgcgaca accgttacca
     2641 tgccgcgttg ctgccaatcg gtgacgtggg cattggtgtc ctcctaagag ccacgctgac
     2701 gatgccggtc gcggcgaagg tgttcaagcc gcctccgatt cccgcgccgc ggtcaggcgt
     2761 agccgagccc ggccgcgagc gcgatcggca tgctcaaggc agccttcgcc gaggcggagg
     2821 ggatccggac ggtcggcact atctcgatcg ccaattgatg cgccggtgtt gctacagtcc
     2881 gaacagccgc ttcgcgttgc ctccggcgat cgcggccacg tcggacggac tgagcgattc
     2941 caccgacgca atgtgcccga tcgggtcgta ttcgcccatg tcgtaggggt agtcggtgcc
     3001 cagaagaatc ttgtcgactc caaacagttt caccatcgcc tccaactgat gcggtgtgaa
     3061 aacgatggta tcgaggtaga ttttcttcag ataataactg ggtggcttcg gcagcgtgcc
     3121 gcgcgaatcg ctgcgcgcac cccaggcgtg atcgatccgt ccggaatacg ccggcagata
     3181 accgccaccg tgcgaggcga tgatcttcag atcgggatac cgttccagca cgccatcgaa
     3241 aatcaaccag tgcaacgcca tcgtggtatc cagcggattg ccgatcacgt tgctgaagta
     3301 gtgcttactg aaccgctgcg gctgcgtgaa cgagttcgga tggatgaaca ccacggcgcc
     3361 cagagcctcg accttggccc agaacggctc gaatgacggg tcggagagtt ctttgtcgcc
     3421 aacatgcgcc aacacctcga cgcccttcag gccgagcgtg gtcatgcaat attccagttc
     3481 atccgccgct gcctctccgc cggcctgcaa cgggaccgaa cccatcgctg ccgggatgcg
     3541 atcgcgtcga gaacgggcaa tctcggcaat gccttcgttg acggcgcggg cggcctgcgc
     3601 cccgacctcc ggcggcaccc cgtaataaca ctggttcggc gccggggaga tcacctgcgc
     3661 atcgactccc atgtcgtcaa aaacctgcat ccggcggtcg agatcggtca gaaacggcgt
     3721 gcggtcggcg tcctgtttgc ggcccagtac gcgggtttct tcggtgtaga aagcagcgcg
     3781 cggatcgggg ctgagatgcg gacgcgcgat gtctgccgct gccggcacca tggcatgcga
     3841 atggatatcc actgtcaaac ttttcggcct gatctcccgt cctgggcggc catgctggcg
     3901 agcgctggtg agatcgtagc gattgaatgg ctcagacacg gcggcctccc cttgagtg
//
LOCUS       DATAVD010000754         2108 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1372560, whole genome shotgun sequence.
ACCESSION   DATAVD010000754 DATAVD010000000
VERSION     DATAVD010000754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2108
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1372560"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..855
                     /locus_tag="VHX39_14325"
     CDS             <1..855
                     /locus_tag="VHX39_14325"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3992343.1"
                     /translation="ANALITGEVDWWENPTADMLPLVRNNANCDAKVDDETGTMSCMR
                     LNQLWPPFDNPAIRRALLGAIDQSEYMTSVAGTDRELWTTPTGYFCPGLPMASKAGLE
                     VFAGKRDFNAVKQAIAAAGYGGEKVILLVPTDQSIVKQECDVCADMLKQVGMNVDYQA
                     MDWGTLVQRRAMMDAPGKGGWNLFMTGWSGLDQSNPVGHVFLRGNGKSAMFGWPDAPK
                     IEALRQQWIDAPDVPAQQKLAVELQLQAFTDVPYIPLGQYFQATAYRKNITDRLNGFV
                     KFWNVRRS"
     gene            1067..1627
                     /locus_tag="VHX39_14330"
     CDS             1067..1627
                     /locus_tag="VHX39_14330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fasciclin domain-containing protein"
                     /protein_id="HEX3992344.1"
                     /translation="MKRVALFAAVLLTTTAPVFAQTMAAPTVLVGGQSMFPARTIVAN
                     AMNSADHTTLVAAVKAAGLVDTLNSKGPFTAFAPTNEAFAYLPASTVDSLLKPENKPM
                     LSKVLTYHVVAGEYDTTRLRSMIRAGNGTATLTTVEGRTLWLMMNGPTNIIVKDAKGD
                     IADIGIGDVHQSNGVFHVIDHVLLPG"
     gene            complement(1805..>2108)
                     /locus_tag="VHX39_14335"
     CDS             complement(1805..>2108)
                     /locus_tag="VHX39_14335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992345.1"
                     /translation="AIALAGGRRRRSWCRSPSGAGCVSGRRALESLWLLPLRWRRFAG
                     ETRPRSLGVLPASGIRMVDALTLGTQLLVSLEPRGGSPTGQPTGPVLYGGRLTALG"
BASE COUNT          430 a          650 c          651 g          377 t
ORIGIN      
        1 gccaatgcgc tgatcaccgg cgaggtcgat tggtgggaaa atccgacggc cgatatgttg
       61 ccactggtgc gcaacaacgc caattgcgac gccaaggtcg atgacgagac cggcaccatg
      121 tcgtgcatgc gactcaatca actgtggccg ccgttcgaca atcccgccat ccgccgcgcc
      181 ttgttaggcg cgatcgatca gtccgaatac atgacttcgg tggcagggac cgatcgtgag
      241 ttatggacga cgccgacggg atacttctgc ccaggcctgc cgatggcgag caaggccggc
      301 ctcgaggtgt tcgccggcaa gcgggatttc aacgcggtca aacaggcgat cgcggccgcc
      361 ggttatggcg gtgagaaagt catcctgctg gtacccaccg atcagtcgat cgtgaaacag
      421 gagtgcgacg tttgcgctga catgctgaag caggtcggca tgaacgtcga ctatcaggcg
      481 atggactggg gaaccttggt gcagcggcgt gcgatgatgg atgcgccggg caagggcggc
      541 tggaatctgt tcatgaccgg gtggtccggg ctcgatcaat ccaatccggt cggccatgtg
      601 tttctgcgcg gcaacggcaa gagcgcgatg tttggctggc ccgatgcgcc aaagatcgag
      661 gcattgcggc agcaatggat cgatgcaccc gatgtaccgg cgcagcagaa gctcgccgtc
      721 gaattgcagt tgcaggcgtt taccgacgtt ccgtacattc cgctcgggca gtattttcag
      781 gcgacggcgt atcgcaagaa catcaccgac cggctgaacg ggttcgtcaa gttttggaac
      841 gtccgacgca gttgaagcga cctccatacg cggaaagtcc ggtgcgtatc gccgacgtcc
      901 gatttcgcac gcgcgcgcgt atccgtgtcc acggctgagc gcgagttaac tgacagcacc
      961 gccaccgcag aaaaaaattc cgtcccgctg catccgttcg cgcgcttcga acgaatggat
     1021 gcagcggccc acgacggccg cccaacccgg gtcaggagat cccaaaatga agcgtgttgc
     1081 cctgttcgct gccgtcctgc tgacgacgac cgcgcccgtg tttgcgcaaa ccatggctgc
     1141 cccgactgtt ctcgtcggcg gccaatcgat gttcccagcc aggacaatcg tcgccaacgc
     1201 gatgaactcc gcggaccaca ccacgctggt ggctgccgtg aaagccgccg gtttggtgga
     1261 tacgctgaac agcaagggtc cgttcacagc atttgcaccg accaatgagg cgtttgccta
     1321 tctgcctgcg agcaccgtgg acagcctgtt gaagcccgag aacaagccga tgctgtccaa
     1381 ggtcctcacc taccacgtcg tcgccggcga atacgacaca acgcggttgc ggtcgatgat
     1441 ccgtgccggc aatggtactg cgacactgac cactgtggag ggtcgcactc tgtggttgat
     1501 gatgaacggc ccgaccaata tcatcgtgaa ggatgccaag ggtgatattg ccgatatcgg
     1561 catcggggat gtgcatcaat cgaacggtgt gttccacgtc atcgaccacg tgctgctgcc
     1621 gggctgaacc ttgctggctg gccagcgcca catcgccgga ggggtggatg ccattgcatc
     1681 cacgcctttt gcatgttggc ccgcagcgag ttgccaaatc aggtgcaacg tcgggaaccc
     1741 gtccacctcc gacggtctgg agttttgttg tcgttaagta acagactgcc gacggcaaaa
     1801 aatattatcc caacgcggtc aggcgtccac catacagcac cggcccggtc ggctgtccgg
     1861 tcggcgaacc gccgcgcggc tccaggctta ccagcaactg cgtgcccagg gtcagggcgt
     1921 ccaccatccg aatgccggac gcgggtaaga cgccaagcga acgcggccgt gtctccccgg
     1981 caaaacgccg ccaacgaagc ggcaagagcc acagcgactc cagtgctcgc ctgccagata
     2041 cgcagccggc gccggaaggc gaacggcacc acgaccggcg gcgccgtcct ccggccaggg
     2101 caatcgct
//
LOCUS       DATAVD010000755         5798 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3421090, whole genome shotgun sequence.
ACCESSION   DATAVD010000755 DATAVD010000000
VERSION     DATAVD010000755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5798
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3421090"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            306..596
                     /locus_tag="VHX39_14340"
     CDS             306..596
                     /locus_tag="VHX39_14340"
                     /inference="COORDINATES: protein motif:HMM:NF016820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbC/VirB2 family protein"
                     /protein_id="HEX3992346.1"
                     /translation="MNHAPLTRSERVKGFAAATVFFVLAMPPVADAQGTFLQGLLSLV
                     QGNVITTLGTLAIIVVGLVLMSMRASFVVILMVCAGIWIVFNASTLSSMLQG"
     gene            600..929
                     /locus_tag="VHX39_14345"
     CDS             600..929
                     /locus_tag="VHX39_14345"
                     /inference="COORDINATES: protein motif:HMM:NF016957.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirB3 family type IV secretion system protein"
                     /protein_id="HEX3992347.1"
                     /translation="MIEEQPADKDRLAIPDTRPQMFLFVPYELAVLFGVLFFGIDTQL
                     HSMFKGLIVLPLWIVAAVLVKRDVNGVRVFMVRLRLALLLLDAHRWGGLSASPWPLQA
                     KDDRGAV"
     gene            919..3396
                     /locus_tag="VHX39_14350"
     CDS             919..3396
                     /locus_tag="VHX39_14350"
                     /inference="COORDINATES: protein motif:HMM:NF015118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992348.1"
                     /translation="MPFDPPIGIDTDPGAAQWLARETAGSEFVPDLHHIAPDLVLLAD
                     GSLLAMIRHPGYPYELESMASRNIRRRQLNDLIRGIADNNASLAFHLCHHMHVPPLTA
                     GKFRSSVARRLFQKYQRNVLQDRLVANDWYITVIVSPRFSPARAARRHLRLFGIKQET
                     TAADSLVRQTRSVMQSLMAYFAKSGAKRLGLRRAPEGHLCSEIAEARRLMITGRWQAV
                     PLTTGALGAAIYAERVTCGTRAVQIDGLDGPRFAKTLAVRDYPGDATRTGMISHLAHL
                     QVDQEGRPELFPFVLSQSFRFQGREEAATRLYLRMTRMMNAFDVQKRGAAALDDVREE
                     VVAGEAVRGYHNFGLTVFGPDIAALHRAASAVGTALNAGGIVPIHEDGNAFGAFWSGL
                     PGNPDWLEGRSGSISSRNLTALASLESFPIGDASGYWGPPIIRFATSGNTAYDLVPHI
                     GDVGHALFIGRSGSGKTLLMVLLALMLDQMMDDRDRVFYFDKDQAAEPMIRSLGGAYL
                     TLKAGAASGLAPLRGLADTPENRAFLEHWIAALMTGDGRGPLSDHTVKMLHRAVARQM
                     RLPADQRSLGAVRAFLGFGDGTDGSRLDRWCDGGADGWLFDGIDDLVRTDARYIGFDL
                     TQLFGHPACPHVAAYLLQRIREVIDGRRITVIADEVRFYLLNPVFAEAIIDFSLTLRK
                     KNGMLWIAAQEPGHIVNNKSGRIGRDLVNQALTQWIFPVINADTNEEEYETLGFTRPM
                     YRAVTEIMPRLPYRSVLLKRETGSAILRTDLEDMQAEIDLLSGREETVRQIPAIRAEV
                     GDDPEAFAVAFARRCEDLRTKPRSTSR"
     gene            3393..4142
                     /locus_tag="VHX39_14355"
     CDS             3393..4142
                     /locus_tag="VHX39_14355"
                     /inference="COORDINATES: protein motif:HMM:NF019608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein"
                     /protein_id="HEX3992349.1"
                     /translation="MRRWLVTTTAMAALLGSYAVPARAEVPVIDASSLAQLANQLQQM
                     KQEYTATLGIFGSLINTLNPNSLATNLIGSQPLPGASVISQLATGSGNFGNLSGLANQ
                     FLQANTVYTPQSTGSNDYNAAMLQKNGNTLAGILAMAQQSITSIQTHITGLTQIQSEL
                     TTDQSQANISAIQGRLQAEQANLAAQNVQAQSLQTMLLAQQQAYQLQQDQTARQSADS
                     VVAYYGGTSSATPPAPTLTASNLPTFSTTGP"
     gene            4144..4566
                     /locus_tag="VHX39_14360"
     CDS             4144..4566
                     /locus_tag="VHX39_14360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992350.1"
                     /translation="MRLHILALAFALPTAAMAQSPFPVGDPMTQPVTPRDIHWYKMHP
                     DVMRQTLRVCQSNSAYALTADCQNAKRAEYGYDADQQQKALKAAPNPFFDPTFWDANP
                     VMRATILAQCRRHGPGDELAYIYCNAAAASEMRVLNRK"
     gene            4571..5497
                     /locus_tag="VHX39_14365"
     CDS             4571..5497
                     /locus_tag="VHX39_14365"
                     /inference="COORDINATES: protein motif:HMM:NF016491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030255 - protein secretion by the type IV
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein"
                     /protein_id="HEX3992351.1"
                     /translation="MAATSQVFTQLAAQWDTIISTGITASVANAITANATLFASILTL
                     FIIICGCLTMFGRMGMSEWIFAMTRAAIISILLTASAFSTYIQTPLTTTIPNWIAQSV
                     NGGTTTTQPQQFDTLFNQMGVAVGRIDQQLHWTDIGEQIECATISAVTLIELVLMFCI
                     WEFSRGMIGLLVAVAPFLLGFYVFQATRHFVLSLVGQAVTALVTMLLVSIMVALAVSA
                     DNAFMVQIATGSGVGAQIQSLLGVTGFFLFSDIIIVMIPALAARIGGGVAHHVGPGRG
                     PASQALNATTRGLTSASAALARAAETITRPPG"
     gene            5512..5757
                     /locus_tag="VHX39_14370"
     CDS             5512..5757
                     /locus_tag="VHX39_14370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992352.1"
                     /translation="MFISKRRGDVTTTVDFRPNGGLFVAIVVVLVGLALFNTGRNGTP
                     INAGHMIIGILMMLLGAVIVFRVIQTIYRVSRSGGRP"
BASE COUNT         1050 a         1838 c         1811 g         1099 t
ORIGIN      
        1 caacggctgc aagcgcctgc tgctgcgcct gcatcgccac catgccccgc accggatcca
       61 acaggatggg aggtaacagt cacccaggcc gggtgtgtgc ccgcaaatac tgcatccgca
      121 ccggccaatc ctgccgctgc gtctgcatcg ccaccgtgcc ctgcgccgga cccgtcgggc
      181 tgggatgtgg tgcccgttcc ggcgggctgt ccgtccgagg caatcccgac ccctccggaa
      241 aatcccgatc cctcagtccc gcctgtcttc tacgtcacca gcacccacga aaggaactct
      301 gatcagtgaa ccacgcaccg ttaacgcgca gtgagcgcgt gaaaggcttt gccgcagcca
      361 cggtattttt cgtgctggcg atgccgcccg tcgccgatgc ccaagggacc tttctgcaag
      421 gcctgctgtc cttggtgcag ggcaacgtca tcacgacgct gggcaccctg gccatcatcg
      481 ttgtcggcct cgtgctgatg tcgatgcgcg ccagctttgt cgtcatcctg atggtctgcg
      541 ccggcatctg gattgtgttc aacgcctcca cgctgtcctc gatgctgcag ggctgatcga
      601 tgatcgagga acagcccgct gataaagacc gcctcgcgat ccctgatacg cgaccgcaga
      661 tgttcctgtt cgtgccttac gaactggcgg tcctgtttgg cgtgctgttc ttcggcatcg
      721 acacgcaact gcactcaatg ttcaagggcc tgatcgtcct gccgctctgg attgtggcgg
      781 ccgtgctggt caagcgggat gtcaacggcg tgcgcgtgtt catggtgcgg ctgcgcctgg
      841 cgctgctgct gttggatgcg catcggtggg gcggcctgtc cgcctcgccc tggccgctac
      901 aggcgaagga tgaccgtggt gccgtttgat ccgcccatcg gcatcgatac cgaccccggg
      961 gccgcacaat ggctggcgcg cgagacggcg ggcagcgagt tcgtccccga cctgcaccac
     1021 attgcccctg atctggtcct gctggctgac ggttcgctgc tggcgatgat ccgccacccc
     1081 ggctacccgt atgagctgga aagcatggcc tcgcggaaca tccgcaggcg gcaactgaat
     1141 gatttgatcc gcggcatcgc ggacaacaat gccagtctgg cattccacct ctgccatcac
     1201 atgcatgtgc cgccgctgac cgctggcaaa ttccgcagca gtgtcgcgcg acgcctgttt
     1261 cagaaatatc agcgcaacgt gctgcaggac cggctggtcg ccaacgactg gtatatcacc
     1321 gtcatcgtct ccccgcggtt ctctccggcc cgggcggcac gtcggcatct gcggctgttc
     1381 ggtatcaagc aggagacgac cgcagccgac agcctggtcc gtcagacccg cagcgtcatg
     1441 cagtcgctta tggcctattt cgccaaaagt ggcgccaagc ggctaggcct gcgccgtgcg
     1501 cccgaaggcc atctgtgcag cgaaatcgcc gaggcccggc ggctgatgat caccggccgg
     1561 tggcaggcgg tgccgcttac cacgggtgcg ctgggcgccg cgatctacgc cgagcgggtg
     1621 acctgcggca cccgggccgt gcagatcgat gggttggacg gcccgcggtt cgccaagacc
     1681 ctggcggttc gggactaccc gggggacgcc acgcgcaccg gcatgatctc gcacttggcc
     1741 catctgcaag tggatcagga aggccgcccc gagctgttcc ccttcgtgct gtcgcagtcc
     1801 ttccgcttcc agggccgcga ggaagctgcg acgcgtctct atctccgcat gacccggatg
     1861 atgaacgcct tcgacgtgca gaagcgcggc gctgcggccc tggacgacgt gcgggaggaa
     1921 gtggtcgccg gcgaagctgt gcgcggttac cacaatttcg gcctgactgt gttcggcccc
     1981 gacattgccg ccctccatcg tgcggccagt gcggttggaa cggcgctgaa cgccggcggc
     2041 attgtgccga tccatgagga cggcaatgcc ttcggcgcct tctggtcggg gctgccgggc
     2101 aatccggact ggctggaggg ccgcagcggg tcgatcagtt cccgcaacct caccgccctg
     2161 gccagcctgg agagcttccc gatcggggat gccagcggct attgggggcc gccgatcatc
     2221 cgcttcgcga cgtccggcaa cacggcatat gacctcgtgc cgcacatcgg cgacgtcggc
     2281 catgcgctgt tcatcggccg atcggggtcc ggcaaaacgc tcctgatggt tctgcttgcc
     2341 ctcatgcttg accagatgat ggacgaccgg gatcgggttt tctatttcga caaggaccaa
     2401 gccgccgaac cgatgatccg gtcgctgggc ggcgcctacc tcacgctgaa ggcgggtgcg
     2461 gccagcggtc tggcgccatt gcgcgggctc gcggacacgc ccgagaaccg ggccttcctg
     2521 gaacactgga tcgccgcgct gatgaccggt gacggccgcg gtccgctcag tgatcacacc
     2581 gtgaagatgc tgcatagggc ggtggcacgg cagatgcggt tgccggcgga ccagcgcagc
     2641 ctgggcgcgg tgcgggcctt cctgggcttt ggggacggca cggacggcag ccggctggat
     2701 cgctggtgtg acggcggcgc tgacggttgg ctgttcgatg gcatcgacga tctggtccgg
     2761 accgatgctc gatatatcgg atttgacctg acccaactgt ttggccatcc ggcctgtccg
     2821 cacgtcgctg cctacttgct gcagcgcatt cgggaggtca tcgatggccg gcggatcacc
     2881 gtcattgccg atgaggttcg cttctatctg ctgaacccgg tcttcgccga agccatcatc
     2941 gatttcagcc tgacgcttcg gaagaaaaac gggatgctgt ggattgcggc ccaggaaccc
     3001 ggccacatcg tcaacaacaa atccggccgc attggtaggg atttggtcaa tcaggcgctg
     3061 acgcagtgga tttttccggt gatcaacgcc gacacaaatg aagaggaata cgagacgctg
     3121 ggattcacgc ggccgatgta tcgggcggtg acggagatca tgccgcggtt gccctatcgg
     3181 tcggtgctcc tgaagcggga gaccggttcg gcgatcctgc gcacggacct ggaggacatg
     3241 caggcggaaa tcgatctgct gtcgggccgc gaggaaacgg tgcgacagat ccccgctatc
     3301 cgggccgagg tcggcgacga tccggaagcc ttcgccgtgg catttgccag acgctgtgaa
     3361 gatctgcgga cgaaacccag gagcacatca cgatgagacg ctggcttgtc accacgacgg
     3421 ctatggctgc cctgctgggc agctacgcgg tgcccgcgcg ggcggaggtt cctgtcatcg
     3481 atgcgtcatc gctcgcgcag ctggcgaacc agttgcagca gatgaagcag gaatacaccg
     3541 caacgctggg gattttcggc tcgctgatca acacgctgaa ccccaacagc ctagccacca
     3601 atttgatcgg ctcgcagccc ctgccaggcg catcagtgat cagccagttg gcgacgggca
     3661 gtggcaattt cggcaacctg tccgggctgg ccaaccagtt cctgcaggcg aacacggtct
     3721 acacgccgca atcgacagga tcgaacgatt acaacgcggc gatgctgcag aagaacggca
     3781 atacgctggc cggcatcctg gcaatggcgc agcagtcgat cacgtccatt cagacccaca
     3841 ttactggcct gacccagatc cagtccgaac tgacgacgga ccaatcgcag gccaatatct
     3901 cggcgatcca gggacggcta caggcggaac aggcgaacct cgcggcgcag aacgtccagg
     3961 cgcagtcgct gcaaaccatg ctcttggccc aacagcaagc ctaccagctg cagcaagacc
     4021 agacggcgcg gcaatccgct gattctgtcg tggcctatta cggcggcacg tccagcgcga
     4081 caccgccggc gcccaccctg acggccagca accttccaac attcagcacg acaggcccct
     4141 gatatgcggc tgcatattct cgctttggcg ttcgcactgc cgaccgccgc tatggctcaa
     4201 tcgccgttcc cggtcggtga tccgatgacg cagccagtca cgccacggga tatccactgg
     4261 tacaagatgc accctgacgt gatgcggcaa acgcttcggg tctgccaatc caactctgcg
     4321 tatgcactca cggctgattg tcagaacgcc aagcgtgctg aatacggcta cgacgcagat
     4381 cagcagcaga aggcgctgaa agcggcgccc aatccgttct tcgatcccac gttctgggat
     4441 gcgaacccgg tcatgcgagc gacgatcctc gcgcaatgcc gccgtcacgg ccccggcgac
     4501 gaactggcat acatatactg caacgccgcg gcggccagcg aaatgcgcgt gctgaacagg
     4561 aaataacgaa atggccgcaa catcgcaggt cttcacccag cttgccgcgc agtgggacac
     4621 gattatcagc accggcataa ccgcgtcggt ggcgaacgcc atcacggcga atgcgacact
     4681 gttcgccagc atcttgacgc tattcatcat catctgcggc tgcctgacga tgtttggccg
     4741 aatgggtatg agcgaatgga tattcgctat gacccgcgcg gcaatcatct cgatattgct
     4801 gactgcatct gcattctcga cgtacattca gaccccgttg acgaccacga tccccaactg
     4861 gatcgcgcag tcggtcaacg gtggcaccac gacgacgcaa ccgcagcagt ttgacactct
     4921 gttcaatcag atgggggttg cggttgggcg gatcgatcag caattgcact ggacagatat
     4981 cggcgaacag atcgagtgcg cgacaatcag cgccgtgacg ctgatcgaat tggtcttgat
     5041 gttctgcatc tgggaattca gtcgcggcat gatcggcttg ctggttgcgg tcgcaccgtt
     5101 cctgcttgga ttctatgtgt ttcaggcgac acggcatttc gtgctgtcgt tggtcggcca
     5161 ggcggtgacg gcgctggtga cgatgctgct ggtcagcatc atggtcgcgc tggctgtcag
     5221 tgcggacaac gcattcatgg tccagattgc cacgggttcc ggggtgggcg cacagatcca
     5281 aagtctgctg ggggtgactg ggttctttct gttcagcgat atcattatcg tcatgatccc
     5341 ggcgctggcg gcgcgcattg gtggcggtgt agcccatcac gtggggcccg gtcgcgggcc
     5401 ggcctcgcag gccctgaatg caacaacacg cggcctgacg agcgccagcg cagcgttggc
     5461 acgtgccgct gaaaccatca cccggccacc tggctaataa ggacagaacg catgttcatt
     5521 tccaaacggc gcggcgacgt gacaacgacg gtggacttcc gtccaaacgg cggcttgttc
     5581 gtggcgatcg tcgttgtgtt ggtcggcctc gcactgttca atacgggccg gaacggaacc
     5641 ccgatcaacg ctgggcacat gatcatcggt attctgatga tgctgctggg cgccgtcatc
     5701 gtgttccgag tgatccagac aatctaccgc gtgtcacgca gtggtggccg gccatgaatg
     5761 ccatcgtcct ggcgctgttg ctggcggtca gcggctgc
//
LOCUS       DATAVD010000756         6281 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2302409, whole genome shotgun sequence.
ACCESSION   DATAVD010000756 DATAVD010000000
VERSION     DATAVD010000756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6281
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2302409"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..293)
                     /locus_tag="VHX39_14375"
     CDS             complement(<1..293)
                     /locus_tag="VHX39_14375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992353.1"
                     /translation="MARVPLITSKDQVASEHHATVEAIIGSRGALHGPFSVFLHSPEI
                     AGRVAHLGAYVRFEGTLDMRVRVLAVMVVAREFEAEYVWGAQTGGARRQNVPES"
     gene            complement(297..1472)
                     /locus_tag="VHX39_14380"
     CDS             complement(297..1472)
                     /locus_tag="VHX39_14380"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEX3992354.1"
                     /translation="MLTVTRDMVMPTAITGSYPRPLWYDVSLSGRSFKSAMGDSLFRE
                     QYLDAVAAVINAQEAAGLDIVTDGDARFDLAVGGKSWFFYPIERLGGVNGHRDLSRGW
                     MSRHGLRPGKILWEVQEAYQPGVVTQQLSRGPLEYTALWKTAQRLSDKPIKFGGICAP
                     ALASMLWNEHYADDQAMILDLCDIMNAEFRELADSGCPLIQVEEPPHHGRSTNPATTD
                     VELRFMTEAFNRQLVGVNAEIWVHTCWGNPNQQRVYWEVPSYERALPHLLQLDCDVIT
                     FEAASSEGRDLALFGKYKTDKKIGIGVINHCSTNVEPPEFVAMLIRKALEYIPPERLV
                     ITTDCGFGREGLSRRIAFYKCVSLVEGTNIVRRELGLPEARVRAADPTLYFAPSRKD"
     gene            complement(1483..2268)
                     /locus_tag="VHX39_14385"
     CDS             complement(1483..2268)
                     /locus_tag="VHX39_14385"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3992355.1"
                     /translation="MDNWNPQPLDPGQITLHRRGTGKPLVLLHCLGQSWRFWGVLDPL
                     KDRNELIAYSFPGHQDAPLPGHQYGAPELTEQLRAAALRAGLTKFHLMGISLGGSVAQ
                     YFAGTYPDMVDKLVLADCTPRYDDESRANWPVRAAAARADGVPSLIPFLMQVFFTKDS
                     LDQDGPNVRHVRETFESCNGEAYALACETLAMLDAREQTRQITAPTLILYGSNERPSF
                     KDAAQWMHQTIKGSEVLEVPLAGHASVRERPEFVVQQLRAFLD"
     gene            2267..3682
                     /locus_tag="VHX39_14390"
     CDS             2267..3682
                     /locus_tag="VHX39_14390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992356.1"
                     /translation="MPDDAPLALLRRHSNPIGQQLEMFDRRRLWIIGLAVAIVWYPTL
                     TWLLGFTPWTKLDFGLAFNSMAEHLLAGRFDVDPQAIGSEGFDVDGRTVSYFGIFCAL
                     LRIPLVLLPGFARTDVTWWSCLIAVLLATWFQMRAIAQIWQAQSTPRQDWLAAALLIS
                     VILGGPHIQFLRPSIYQEPINWACAQSMAFVWLAIRGMTSAQGFNRSTLCWMAVCAGL
                     ALLTRVSFGIGGYAAFGLLLLARGQPREWPAPAAILLAFIAMTGIVNLGRWGNPLTFA
                     DYSHFDISQDVYPDRLGRIAAYGAFNPTRIWLGLDYYFLPIWIWIRADGHVLFAESQA
                     TLMDAMELPPGSFLLTDPLLLGLAVAGVLSVRDRVRAALLLGLGVPPVLMLCAISMAH
                     RYRMEFYPLLFLAALFCITAPSRRTALTKSFRAAIIGSIVVGIVAAHGMAVLDARSPR
                     GPGEFYLERYGLIGTYTRQPR"
     gene            complement(3691..4626)
                     /locus_tag="VHX39_14395"
     CDS             complement(3691..4626)
                     /locus_tag="VHX39_14395"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEX3992357.1"
                     /translation="MPLDATTGLDPYSEIVVHAFDRVGPAVVHVTCLREDGHPAGQGS
                     GVVFTPDGYVLTNHHVVAKAARIKASLTDGREVDARLVGSDAVTDIAVLRLAANGLPH
                     AELGCSADLRVGQMVVAIGNPLGFTCTVTAGIVSALGRTLRTHSGGLIDSVIQTDAPL
                     NPGNSGGPLVAGGGTVVGINTAMIGSAQGICFAIGIDTAVWVATRLMRDGKVRRSRLG
                     VSGQTVPIDTRVRRFHGLDVGSGALVAGVEPDGPAAKGDLQMGDVIVALDGEPVSGVD
                     ALHRLLTEERVGRDVALTVLRRAQLREIAVTAGEG"
     gene            4791..5678
                     /locus_tag="VHX39_14400"
     CDS             4791..5678
                     /locus_tag="VHX39_14400"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HEX3992358.1"
                     /translation="MDIIEQLSSALADRLAGVAPSVVALKAGPRHRSGILWRPDVVVT
                     SEQVVGDQDSAVIVQNGAEVNAKLAGRDPTTNVAVFRLERSLPGGLPSPTTSTPRVGS
                     LALVVGADRSGMATGRLAMVHATGPAWHSMAGGRIDTLIRLDVRLGSDEGGPILDSTG
                     QLLGMSTSGPRRRGLVIPAATIARVVDPLLEQGHIARGWLGVGLQPVAVPGALQASTG
                     QARGAMVLQLVANGPAEQAGVLPGDILLSIDDFRFGQRRGLASLMGPERIGKAVTVRL
                     LRAGETREIGVVIAARPRS"
     gene            5689..6213
                     /locus_tag="VHX39_14405"
     CDS             5689..6213
                     /locus_tag="VHX39_14405"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3992359.1"
                     /translation="MTLRVRLIASDPIRQHGLTAMLAEAGHTIVTDTPDVVLCDLGSA
                     ATPQETEAPVVALTDRMPRDPPAGVLPREVSATWLDLALRAVAGGLLVRAPFPEESAG
                     FVPAVEESPLTPRETEILTLIGQGMSNKAVARHLGISVHTVKFHLEALFARLGATNRA
                     EAVAKGLLGGVIEL"
BASE COUNT         1111 a         1983 c         1982 g         1205 t
ORIGIN      
        1 gattccggaa cgttctgccg ccgggcgccg ccggtttgcg cgccccagac atattccgcc
       61 tcgaactcgc gcgccaccac catcacagcg agcacgcgaa cccgcatgtc cagcgtgcct
      121 tcaaaccgca cgtaagcgcc gagatgcgcc acccgtccgg cgatttccgg actatgcagg
      181 aaaacgctaa acgggccgtg cagcgcgccg cgactgccga tgatggcctc gacagtcgca
      241 tgatgttcgg aggcgacctg gtccttgctg gtgatcaacg gcacgcgtgc catggttcag
      301 tccttccttg atggtgcgaa atagagcgtc ggatcggcgg cgcgcacccg cgcttccggc
      361 aggccaagct cgcggcgaac gatgttggtg ccttcgacca gcgagacgca tttgtagaaa
      421 gcaatacgcc ggctcagccc ttcgcggccg aagccgcagt cggtggtgat caccagacgc
      481 tcgggcggga tgtattccaa cgccttgcgg atcagcattg cgacgaactc cggcggttcg
      541 acattggtgc tgcaatggtt gatcacgccg ataccgattt tcttgtcggt cttgtactta
      601 ccgaacagtg ccagatcgcg gccctcgctg ctggcggcct cgaaggtgat cacgtcgcaa
      661 tcgagctgca acagatgcgg cagggcccgt tcataactcg gcacttccca gtagacgcgc
      721 tgctgattcg gattgcccca gcaggtgtgc acccagattt ccgcgttaac accgaccagt
      781 tgccggttga atgcctcggt catgaagcgc agctcgacgt cggtggtagc cggattggtg
      841 gagcggccgt gatgcggcgg ttcctcgacc tggatcagtg ggcaaccgga atcggcgagt
      901 tcgcgaaact cggcattcat gatgtcgcaa agatcgagga tcattgcctg gtcgtcagcg
      961 taatgttcgt tccacaacat gctggcgagg gccggcgcac aaataccgcc gaattttatc
     1021 ggtttgtcgc tcaatctctg ggccgtcttc cacaatgcgg tatattccaa cgggccacgc
     1081 gacagttgct gcgttaccac gccgggttga taggcttcct gcacttccca caggattttg
     1141 ccgggccgta aaccgtgccg gctcatccag ccgcgcgaaa gatcgcgatg gccattgacc
     1201 ccgcccagtc gctcaatggg ataaaagaac caggatttgc cgccaacggc gaggtcgaac
     1261 cgggcgtcac cgtcggtgac gatgtcgaga cctgcggctt cctgcgcatt gatcacggca
     1321 gcaaccgcat cgagatattg ctcgcggaac aacgaatcgc ccatcgcact tttgaacgac
     1381 cggccgctca gactgacatc gtaccagagc ggcctcgggt aagacccggt gattgccgtc
     1441 ggcatcacca tatcgcgtgt tacggtcagc atggttcgct cctcaatcca ggaatgcgcg
     1501 caactgttga acgacgaatt ccggccgctc ccgcaccgag gcgtggcccg cgagcggcac
     1561 ctccagcacc tcgctgccct tgatcgtttg atgcatccat tgcgccgcat ccttgaacga
     1621 tggacgttcg ttggatccgt acaggatcag ggtcggcgca gtgatttgcc tggtttgctc
     1681 acgcgcatcc agcattgcca gcgtctcgca cgccagcgcg taagcttcgc cgttgcagga
     1741 ctcgaaggtt tcccgcacat gacgcacgtt cggtccatcc tggtccagcg agtccttggt
     1801 gaaaaacacc tgcatcagga acgggatcag gctgggcacc ccgtctgccc gagcagcggc
     1861 agcacgcaca ggccaattgg cgcgtgactc gtcatcgtag cgaggggtgc aatccgccag
     1921 cacgagcttg tccaccatgt cgggataagt gccggcgaaa tattgcgcga cgctgccgcc
     1981 cagtgaaatg cccatcaggt ggaatttggt gaggccggcg cgtaaggcgg cggcacgcaa
     2041 ttgctcggtc agttcgggag cgccgtattg atggccgggc agcggcgcat cctgatggcc
     2101 cggaaaactg tatgcgatga gttcgttacg gtcctttagc ggatcgagca cgccccaaaa
     2161 ccgccaggac tggccgaggc aatgcaaaag caccagcggt ttgcccgtgc cgcgccggtg
     2221 cagcgtgatc tggccggggt cgagcggttg cgggttccag ttgtccatgc cagacgatgc
     2281 tcccctcgcg ttgcttaggc ggcactctaa cccgatcggc cagcaactgg aaatgttcga
     2341 ccggagacga ttgtggatca tcggcctcgc ggtcgcgatc gtttggtatc ccacgctgac
     2401 ctggcttctg ggctttacgc cgtggacgaa gctggatttc ggtctggcgt tcaactcgat
     2461 ggccgaacat ttgctggccg gccgcttcga tgtcgacccg caggcgatcg gatcggaggg
     2521 cttcgatgtc gacggccgga ccgtgtcgta tttcgggatc ttctgcgcgc tgctgcggat
     2581 tccgttggta ctgttgccgg ggttcgcgcg gaccgacgta acctggtggt cgtgtctgat
     2641 tgcagtcctg ctcgccacct ggtttcaaat gcgcgccatc gcccagatct ggcaggcgca
     2701 gtcgacgccg cgtcaggact ggctggccgc ggcattgctg atctccgtca tcctcggcgg
     2761 cccgcacatc cagttcctgc gcccctccat ctaccaggaa cccatcaact gggcttgtgc
     2821 gcaaagcatg gcttttgttt ggctggcgat acgaggcatg acctccgcac aaggtttcaa
     2881 ccgatcaacg ttatgctgga tggctgtctg tgccggcctc gcattactga cccgggtttc
     2941 cttcgggatc ggaggctatg cggcatttgg attgctgcta ttggcccgcg gacagcccag
     3001 agaatggccc gcaccggccg cgatcctttt ggcgttcatc gccatgaccg gaattgtgaa
     3061 cctgggccgc tggggcaacc cactcacctt cgccgattat tcccatttcg acatcagcca
     3121 ggatgtctac cctgatcgac tcggccgaat cgccgcctac ggtgcgttca atccgacgcg
     3181 tatttggttg gggctcgatt actatttcct gccgatctgg atctggatcc gtgcggacgg
     3241 ccacgtgttg ttcgctgaat cccaggcgac acttatggac gcgatggaat tgccgccagg
     3301 aagtttcttg ctcaccgatc cgctgctact tggcctcgcc gtcgcagggg tgctgtcggt
     3361 gcgcgaccgc gtgcgagccg cgttgctgct cgggcttggc gttccgcccg tgctgatgct
     3421 gtgcgcgatc agcatggcgc accggtatcg gatggagttt tacccgctgc tgttcctcgc
     3481 cgctctgttt tgcatcacgg cgccatcccg ccgcacggca ctgacaaaat cgtttcgtgc
     3541 ggcaatcatt ggatccattg tcgttggcat tgtcgcagcc cacggcatgg ctgttctgga
     3601 cgcacgctcg cccagaggac cgggcgagtt ctatctggaa cgttacggat tgatcggcac
     3661 ctacacgcga cagccgcggt gatgccgggg ttagccctcg ccggcggtca ctgcgatctc
     3721 ccgcaactgc gcgcggcgca gcacggtcag ggcgacgtcg cggcccacac gttcctcggt
     3781 cagcaaccgg tgcagcgcat cgacgcccga gaccggctca ccatccaacg cgacaatcac
     3841 atcgcccatc tgcagatcgc ctttcgccgc cggaccatcc ggctcaacgc cggcgaccag
     3901 agcgccactg ccaacatcca gcccatgaaa ccgccgcacc cgcgtgtcga tcggcacggt
     3961 ctgacccgaa acgccaagcc gcgagcggcg gactttgcca tcccgcatca gccgcgtcgc
     4021 cacccagacc gcggtgtcaa tgccgattgc gaaacaaatc ccctgcgccg aaccgatcat
     4081 tgcggtgttg atgcccacga cggtgccgcc tccggcaacc agtgggccac cggaattgcc
     4141 cggattgagc ggggcatccg tctggatcac gctatcgatc agcccaccgg aatgggtccg
     4201 caacgtgcgg cccagtgcgg agacaatgcc ggcggtgacg gtgcaggtga aaccgagagg
     4261 attgccgatc gcaacgacca tctgaccgac tcgcaaatcc gccgagcagc ccagttcggc
     4321 atgtggcaat ccgttggccg cgaggcgcag aaccgcaatg tcggtgacgg catcgctgcc
     4381 gaccaaccgt gcatcaacct cccttccgtc ggtcagcgac gccttgatgc gcgcagcctt
     4441 ggccacgacg tgatggttgg tcagaacata accgtcgggc gtgaagacca ctccggagcc
     4501 ctggcctgcc ggatggccgt cctcacgcaa gcaggtgaca tgcacgaccg ccgggccaac
     4561 ccgatcgaac gcatgcacaa cgatttcgga ataaggatcg aggccggtcg tggcatccaa
     4621 cggcatgacg gagtttccca tggtgaattt taggggacga caccagatag gtgctccggg
     4681 ctgatcgcct acccggccaa acgaccgggg cgacccctgg ccatcattcc gataccggca
     4741 gcgcgaggaa caaggcaggt tgccgccatc aacacaggag accgtccgaa atggacatca
     4801 ttgagcaact ttcctcggca ctggcagacc ggctggccgg agtagcacca tcggttgtag
     4861 ctctgaaggc cggaccacgg catcgcagcg gcattttgtg gcggcccgac gtggtcgtga
     4921 catccgagca ggtggtgggc gaccaggact ccgccgtcat cgtgcagaac ggcgccgagg
     4981 ttaacgcgaa actcgccggg cgtgatccga ccaccaatgt cgcggtgttc cggctggaaa
     5041 ggtcactgcc aggcgggctg ccctccccca cgacgagcac gcccagggtg ggatcgctgg
     5101 ctttggtggt gggcgctgac cgttccggga tggcgaccgg gcgacttgcc atggtgcacg
     5161 ccacgggacc ggcctggcac agcatggcgg gcggccgcat cgacacgctg atccggttgg
     5221 acgtgcgtct cggctctgat gagggcggcc caatcctgga ttccactggg cagcttttgg
     5281 gcatgtcgac ctcggggcct cgccggcgag gccttgtgat cccggcggca accatcgccc
     5341 gggtggtcga tccgttgctg gaacaaggtc acatcgcccg cggctggttg ggcgtcggcc
     5401 tgcagccggt tgccgttccg ggtgcgttac aggcgtcgac cggtcaggcc cgtggcgcga
     5461 tggtattgca attggtggcg aacgggccgg cggagcaggc cggggtgctg ccgggcgaca
     5521 tcttgctatc gatcgatgat ttccggttcg ggcaacgccg cggcctcgcg tccctgatgg
     5581 gcccggagcg gatcggcaaa gcggtcaccg tgcggttgct gcgggccggg gaaacccggg
     5641 aaatcggcgt cgtgattgcg gcgcggcccc gatcgtgaga atgggggcgt gactcttcgg
     5701 gtcaggctga ttgcgtctga ccccatccgc cagcatggcc tgactgccat gctggcggag
     5761 gccggccaca ctatcgttac cgacaccccc gacgtcgtgc tctgcgacct gggctccgct
     5821 gccacaccgc aggagaccga ggcaccggtc gttgcgttaa ccgatcgtat gccgcgtgac
     5881 cctcccgcgg gggttttgcc gcgcgaggtc agtgccacat ggctcgatct ggcattacga
     5941 gcggtggccg gcgggttgct ggtacgtgcg ccattcccgg aagagagcgc cgggttcgtg
     6001 cctgcggtcg aagagtcacc gctgaccccg cgcgagacgg aaattctgac cctgatcggc
     6061 cagggcatga gtaacaaagc agtggctcgc cacctgggga tttccgtgca cacggtgaag
     6121 tttcatttgg aagcattgtt cgcgcggctc ggcgcgacga accgggcgga ggcggtggcc
     6181 aaggggttgc tcggcggggt gatcgagttg tgacatcgct tccggccggg agtactgtgg
     6241 tgtcgcccat agaggagacg ccaaatgcag atcgtcgatt c
//
LOCUS       DATAVD010000757         2055 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3234668, whole genome shotgun sequence.
ACCESSION   DATAVD010000757 DATAVD010000000
VERSION     DATAVD010000757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3234668"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            197..>2055
                     /locus_tag="VHX39_14410"
     CDS             197..>2055
                     /locus_tag="VHX39_14410"
                     /inference="COORDINATES: protein motif:HMM:TIGR01686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIC family phosphatase"
                     /protein_id="HEX3992360.1"
                     /translation="MMRGPDLYWLPRPPTWSQDLASAEAGTIAWPVLCALARVRIDAL
                     ETRSLDRKRQHLVTNLPEEMVAPPIRLAVLASSTVDHLLPAIRVAGMRRDLWIETFTP
                     DYGQHTRALIDPASPLYAFRPTAVLFAFDSRHLLAGIEPGDDAAEVEARITRIGENLA
                     TQWTRARQAFRCQVIQQTLLPVFDPLFGSNEHRLPGSPYWAIQQLNATLRRFADTESV
                     DILALDAIVATDGLAAWHDPALWHRAKQEVHPSAAPGYGDRVVRLLAAALGRSSKALV
                     LDLDNTLWGGVIGDDGLEGIKLGQGSALGEAFVAFQRYAHDLSRRGIILAVCSKNEMA
                     NAIEPFEKHPEMVLKRSDIACFVANWTDKAANIRDIATQLNIGLDSLVFADDNPAERA
                     IVRRELPMVAVPELPEDPTLWPATLAAAGYFESLRLTKEDLERSGQYQANLQRSNLLA
                     SATDIEGYLRSLEMRAIWSRFDRVGQARIVQLINKTNQFNLTTRRVTDEEVAALIEDE
                     RALTLQIRLIDSFGDNGIIAIVIGLFQPGTQDIRIDTWLMSCRVLGRRMEETTLNLIV
                     QQARALGCKRLIGVYRPTAKNAMVRDHYPRLGFSATGTPHGDGDAEFVLPLDG"
BASE COUNT          378 a          623 c          651 g          403 t
ORIGIN      
        1 gtgatgtaat ttccgccgga agaaacacgg gcctgtttgc ccgttctggt gtggacgagg
       61 cgccgcttcg cataaacgtt ccacgcgatg atgtgtcacc aatcacgaaa tcaggtcact
      121 tgaagattcg ttgcctttcc cgggccgccc ggtctagaag cccgcacgcg gcgtgggccg
      181 ttcaggcagg atgttcatga tgcgcggccc ggacctctac tggctgcctc ggccgcccac
      241 ctggtcgcag gatctcgcat cggccgaggc gggaaccata gcttggcccg tgctttgcgc
      301 tctggcgcgg gtgcgcatcg acgcgctgga aacccggtcg ctcgaccgca aacggcagca
      361 cctggtgacg aacctgccag aagaaatggt tgcgccgccg atccgtctgg ccgtgctcgc
      421 gtcatccacc gtggatcacc tgctgccggc cattcgcgtg gccgggatgc gccgcgatct
      481 gtggatcgag acgtttacgc cggattatgg ccagcacacg cgggcgctga tcgacccggc
      541 gtcgccgttg tatgcgtttc gtcccactgc ggtcttgttc gcgttcgact cccggcattt
      601 gctggctggc attgagccgg gggatgacgc ggccgaggtc gaagctcgga tcacgcggat
      661 cggtgaaaac cttgcgacac aatggacgcg ggcacgccag gcgtttcgtt gccaggtcat
      721 ccaacaaacc ttgctgccgg tgttcgatcc attgtttggc agcaacgaac accgtctgcc
      781 aggctcgccg tactgggcta ttcagcagct caatgccacg ctgcgccgct tcgcagatac
      841 ggaatcggtt gacattctgg cacttgacgc gatcgttgcc accgacggcc tggccgcatg
      901 gcacgatccg gcattgtggc atcgcgcgaa acaggaggtg catccgtctg ccgctcccgg
      961 ctacggcgat cgtgtggtcc ggctgctggc cgcggcgttg ggccggtcgt cgaaggcgct
     1021 tgtgctggac ctcgacaaca cgctttgggg cggtgtcatc ggtgacgacg gcctggaagg
     1081 catcaaactt ggccagggca gcgctctggg cgaggccttc gtcgcgttcc aacgttacgc
     1141 gcacgatttg agccggcgcg gcatcatcct cgcggtttgc tccaagaacg agatggcgaa
     1201 cgcgatcgag ccgtttgaaa agcatccgga gatggtgttg aagcgctcgg acattgcctg
     1261 tttcgtcgcc aactggaccg acaaggcagc caacatccgc gacatcgcaa cgcagttgaa
     1321 tatcggcctg gacagcctgg tgttcgccga tgacaacccg gcagaacggg cgatcgtgcg
     1381 ccgcgaattg ccgatggttg cggtgccgga gttgccggag gacccgacgc tgtggccggc
     1441 gaccctggcc gcggctggat atttcgagtc attgcggttg accaaggaag acctggagcg
     1501 gtccggccaa tatcaggcga acctgcaacg cagcaacctg ctggcatctg caaccgatat
     1561 cgagggatat ctgcgcagcc tcgagatgcg cgcgatctgg agccgcttcg atcgcgtcgg
     1621 tcaggcccgc atcgtgcaac tcatcaacaa gaccaatcag ttcaatttga caacgcggcg
     1681 ggttaccgac gaagaagtgg cagctttgat cgaggacgaa cgggcactga cgttgcagat
     1741 ccgcctgatc gacagcttcg gcgacaacgg catcattgcc atcgtcatcg gtttgttcca
     1801 gccaggtaca caagatatcc gcatcgacac gtggctgatg agctgccgcg tactgggccg
     1861 gcggatggaa gaaacgacac tgaacctgat cgtccaacag gcccgcgctc tgggctgcaa
     1921 gcggttgatc ggtgtgtatc gtcccactgc aaaaaatgcc atggtccgtg atcactatcc
     1981 tcgacttggc ttttcggcga ccggcacgcc tcacggggac ggtgacgccg aatttgtgct
     2041 gccgctggat ggctg
//
LOCUS       DATAVD010000758         6128 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1932990, whole genome shotgun sequence.
ACCESSION   DATAVD010000758 DATAVD010000000
VERSION     DATAVD010000758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6128
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1932990"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1099
                     /locus_tag="VHX39_14415"
     CDS             <1..1099
                     /locus_tag="VHX39_14415"
                     /inference="COORDINATES: protein motif:HMM:NF015214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase C-terminal
                     domain-containing protein"
                     /protein_id="HEX3992361.1"
                     /translation="FGEGKKEYGENMRRYYDHIAENDLVLTHSLLNLQRSRLVTGMFN
                     LEEGTALQAVKETSAGVVVRGARVLATLGPFADEIAVYSPRLGRHTETHSPFALNFAI
                     PCSTPGLKFQCRDSFDYGQSHFDHPLGSRFEEMDCVVFFDDVVVPWDRIFIYGDVERL
                     NEAPNITSTSSHTAHQGAAKNLAKCELVLGVALLLSETLGNAHLPHTQERIGELMMYT
                     ELMRACMRAGEADAKLNEWGVMTPASLPVETTRNLFMTAYPRMAEILQLMSSSSMMIL
                     PTEADFKTPMAPFIEQYLATEGSSARDRVKLFHLVWDIACSSFGQRQVHYERFFASDP
                     LTRARALASTYPKKEVTDRVLEFLNRDEIAP"
     gene            1117..1626
                     /locus_tag="VHX39_14420"
     CDS             1117..1626
                     /locus_tag="VHX39_14420"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3992362.1"
                     /translation="MYLGHVNMYVRNAEKSAEFYRAILGLHTYHTAPGRAVFLSANKE
                     KSHEVALMSVGDDAPLQAKGQVGLNHMAWMVDSLDELKVLYQRLKDANVPFDHISDHG
                     LSLGIYFRDPDGNGLEVSYELPREKWPRQDQVFASDVVNLGLFPGPWDDDPKYSRRSR
                     LQEPAKATA"
     gene            complement(1692..2222)
                     /locus_tag="VHX39_14425"
     CDS             complement(1692..2222)
                     /locus_tag="VHX39_14425"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HEX3992363.1"
                     /translation="MVHANAAGAALTSPGRSGLTISRAVFGGTQLSARHRDDNDALRR
                     LVVGAAAGGVGGVLRVRARSDDVRDEATLAVLVSQLPRRLMTQGAGLAIIVALETSRP
                     ECVPERMLSDLYSLTTAEAAVAGALAGGITAEDVARERGVSLDTVRTQVRGVLRKTNA
                     ANLRDFERIVALLSAA"
     gene            2195..3232
                     /locus_tag="VHX39_14430"
     CDS             2195..3232
                     /locus_tag="VHX39_14430"
                     /inference="COORDINATES: protein motif:HMM:NF015043.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carotenoid oxygenase family protein"
                     /protein_id="HEX3992364.1"
                     /translation="MRRRRWRAPPVHHGHRFLALSECAVPYELTSGLDTVERCDFAGG
                     LPLGMCAHPRIDPVTGEMILFRYWMEAPYLYWAAIGPDGTVARPPEVIAEIDRGYLIH
                     DFVITEDYAVLVICPATFDLSRISQGANTLTWEPDRGTRIAVIPRNGQNRQIRWIETD
                     AFWCWHYANAWQEGGEIVTVCPWWNYLNFGVPGLSPIEGHLVRARINPDAGSVRFDVI
                     DDRPTEFPRIDDRRQGRPSRYLTVGHRSQSLQTGAFDELLRFDLKRGTVVERRFPGQV
                     IGEAVFAPKSGRNDEAAGYVLTFATELATMESSFVILDAEDISGPPVAVVKLPQRVPN
                     GLHGNWYPTQP"
     gene            complement(3337..4068)
                     /locus_tag="VHX39_14435"
     CDS             complement(3337..4068)
                     /locus_tag="VHX39_14435"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3992365.1"
                     /translation="MSVTGKVILITGAARGLGLEYAKSLGAAGAHIVGGDVLDCSIQG
                     GVSVKLDVADMASVEAMVAAALNAFGRIDGLVNNAALYGSLRGGRFNQIPEQDWDAAM
                     TVNVKGIWNCCKAVVPAMRQGGGGSIVNIASLAATYGMPFALHYTTSKAAVIGLTRGL
                     ARELGRDDIRVNAVAPSAVMTEGTREFMGERVDRALQVIRDGQSIQRTLEPGDLSGTI
                     AWLLSDASAFVTGQTIAVDGGTVML"
     gene            4165..5241
                     /locus_tag="VHX39_14440"
     CDS             4165..5241
                     /locus_tag="VHX39_14440"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
                     /protein_id="HEX3992366.1"
                     /translation="MAPNTKRVFYVNALSHDVYLEILAKRPDVQIDKLVNDSPEDEAA
                     PVLAHAHAYQIGSSRQELAMKYQGYTPLLERCPNLVVLSTNGAGFDTINLEDATKAGI
                     AAVNQAGGNKEGVAEHVMAMMLSLSKRIMLTDHQMRRGGDYNRRDFMGDDVLGRTIGI
                     IGLGNVGSRVAELCRGLFQMRVLAYDPYLTAEVMRQRGAEKVATLEELLRQSDYVSTN
                     CPHTAETRGMMGAAAFAMMQPHAYYITTARGGIHDEAALAEALGKKQIAGAGLDVWED
                     EPPPTDHPLMQFDNVLVSPHTAGITRQSRYNIAKIAAEQMLDILDGKKPPRLLNPEVW
                     PAYQDRFEQIMGFRPEGQGNIPVQ"
     gene            complement(5571..>6128)
                     /locus_tag="VHX39_14445"
     CDS             complement(5571..>6128)
                     /locus_tag="VHX39_14445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992367.1"
                     /translation="NWEAASHLFRDAMALEKHSGGPQQKMSDGAAYLWRSELAGRPRD
                     EAAWQALAEYADNALPRPGSGLADLHVVLAQAVAGEDGARASQIEDMARDGRYLSGTY
                     LPALSRGFAAFERGDFAAAVAALAPLAGQNERIGGSRAQHDLIEFTLLKALLNAERLE
                     EAQALLLTRRPGASGVPVAGVAAIH"
BASE COUNT         1170 a         1955 c         1871 g         1132 t
ORIGIN      
        1 tttcggtgag ggaaagaagg agtacgggga aaatatgcgg cgatattacg atcatatcgc
       61 cgagaacgac ctggtgctga cccattccct gctcaatctg caacgcagcc gtctcgtcac
      121 cggcatgttc aacctggagg aaggcaccgc gttgcaggcg gtcaaggaga cctcggccgg
      181 cgtggtcgtc agaggggccc gcgtgctcgc caccctcgga ccgttcgccg atgagatcgc
      241 ggtctattca ccccgcctcg gccggcacac cgaaacccac agcccgtttg cactgaactt
      301 cgccattccg tgcagcacgc ctgggctgaa attccagtgc cgtgacagtt tcgattatgg
      361 acagtcgcac ttcgaccatc ctctgggctc gcgctttgag gaaatggact gcgtggtgtt
      421 cttcgacgac gtggttgtgc cctgggaccg catcttcatc tatggcgatg tcgagcggct
      481 gaacgaagcg cccaacatta cgtcgacgtc ttcgcacacc gcccatcagg gtgccgcgaa
      541 gaacctggcc aaatgcgaac tggtgcttgg cgtcgcgttg ctgctcagcg agacgcttgg
      601 caacgcgcat ttgccgcaca ctcaggagcg catcggcgaa ctgatgatgt atactgagct
      661 gatgcgcgcc tgcatgcgcg cgggcgaggc tgacgctaag ctcaacgaat ggggcgtcat
      721 gacccctgca tccctgccgg tcgagaccac ccgcaacctg ttcatgaccg cctatccgcg
      781 gatggcagag atcctgcagt tgatgagttc gtccagcatg atgatcctgc ccaccgaggc
      841 ggacttcaaa accccgatgg cgccgttcat cgagcaatac ctcgccaccg aaggcagcag
      901 cgcgcgcgac cgggtcaaac tgttccattt ggtgtgggac atcgcctgct cgtcatttgg
      961 gcagcgccag gtgcattatg aacgcttctt cgccagcgac ccattgaccc gggcgcgcgc
     1021 attggcatct acttatccca agaaggaggt cacggatcgg gttctggaat tcctgaaccg
     1081 tgacgagatt gcaccctgag ggcaaggagc catcgcatgt atttgggtca cgtcaacatg
     1141 tatgtccgca atgcggagaa gtcggccgag ttctatcgcg ccattctggg cctgcacacc
     1201 tatcacacgg cgccgggccg cgcggtgttc ctgtcggcca acaaggaaaa gtcgcacgag
     1261 gtcgcgctga tgagcgtggg cgacgacgcg ccgttgcagg ccaagggcca ggttgggctg
     1321 aaccacatgg cctggatggt cgactcattg gacgaactga aggtgctgta ccagcgcctg
     1381 aaggacgcca acgtgccgtt cgaccacatt tccgaccacg ggctgtctct gggcatctat
     1441 ttccgcgatc cggacggcaa cgggctcgaa gtgtcgtacg agttgccgcg cgagaaatgg
     1501 ccgcggcagg accaggtgtt tgcttccgac gtggtgaacc ttgggctgtt cccgggaccg
     1561 tgggatgacg atccgaaata ctcgcggcgg tcgcggctgc aggaaccggc gaaagccacg
     1621 gcctgaagtt cgtttcagac gcggtgcccc gcgtgggtgc cgcgccctcg accgccgcgt
     1681 caagccgact gtcaggcagc ggaaagcagg gcaacgatac gctcgaaatc tcgcaaattc
     1741 gcagcgttgg tcttacgcag gacgccccgc acctgcgtgc gcacagtgtc cagtgacacg
     1801 ccgcgttcgc gggccacgtc ttcggccgta atccccccgg cgagcgcacc ggcgacggcc
     1861 gcttctgcag tcgtgaggct gtaaaggtcg ctcagcatcc tttccggtac gcactccggc
     1921 ctggacgtct caagggctac aatgatcgcc aggccggctc cctgggtcat cagacgtcgg
     1981 ggcagctgcg agaccagaac tgcgagcgtc gcctcgtccc ggacatcgtc ggaccgcgcg
     2041 cggacacgca gcacgccgcc gacgcccccg gccgccgccc cgacgacgag ccgccgcagt
     2101 gcatcgttgt cgtcccggtg ccgggcagaa agctgcgtgc cgccgaacac ggcgcggctg
     2161 atcgtcaggc ctgaccgccc aggcgacgtg agggctgcgc cggcggcgtt ggcgtgcacc
     2221 acccgttcac cacggtcacc ggttcctcgc gctcagcgaa tgtgccgtcc cgtacgaact
     2281 cacatctggg ttggacacag ttgagcgctg cgactttgcc ggcggcctgc ctctgggcat
     2341 gtgcgcgcac ccgaggatcg atcctgtcac cggagaaatg attctgttcc gctactggat
     2401 ggaagcaccg tatctgtatt gggcggcgat cgggcctgac gggaccgtgg cgcggccgcc
     2461 ggaagtgatc gccgagatcg accgtggcta tctgatccat gatttcgtga ttaccgagga
     2521 ttatgccgtt ctggtgattt gtccggcaac cttcgatctg tcccgcatca gccagggcgc
     2581 caatacgctc acgtgggagc cggatcgggg gacccgcatc gccgtcatcc cgcgcaacgg
     2641 acagaaccgg caaattcgct ggatcgaaac cgatgctttc tggtgctggc attacgccaa
     2701 cgcgtggcag gaaggtggcg agatcgttac cgtatgccct tggtggaact acctcaattt
     2761 cggtgttcca ggcctgtcgc caatcgaggg tcacctcgtg cgagcgcgga tcaatccgga
     2821 cgcaggaagc gttcgctttg acgtgatcga cgaccggccg accgagttcc ctcgcatcga
     2881 tgatcgccgg caaggcaggc ccagtcgcta tctgacggtt gggcatcgat ctcagtcgct
     2941 tcaaacgggt gccttcgacg aactgcttcg tttcgacctc aaacgcggaa cggtggtgga
     3001 gcgccggttt cccggccagg tgatcggcga ggcagtcttt gcgccgaagt caggtcgaaa
     3061 cgacgaagca gccggttatg tcctcacttt cgcaaccgaa cttgcaacga tggaatccag
     3121 cttcgtcatc ctcgatgccg aggacatatc gggtccgccc gtggcagtgg taaagctgcc
     3181 tcagcgggtg ccgaatggtt tgcacggcaa ttggtaccca acgcaaccgt gagtgggtcg
     3241 gtccgaagca ggaaccggac ccggcgatcg caggaagagg cccggcataa accggtcgaa
     3301 gccttctgtg caggagttag gcggtggtgc agcctgctac aacatgacgg tgccaccgtc
     3361 cacggcgatg gtctgaccgg tcacgaaggc gctggcatcg cttagcagcc atgcaatcgt
     3421 tccgctcaga tcgccaggtt ccagggtgcg ctggatcgac tggccgtcgc ggatcacctg
     3481 cagagcccga tctacccgct cgcccatgaa ctcgcgcgtg ccctcggtca tcaccgcact
     3541 gggcgccacc gcgttgacgc ggatgtcgtc gcggcccagt tcgcgggcga gacctcgggt
     3601 gaggccgatg acggcggctt tcgaggttgt gtagtgcagc gcgaacggca tcccataggt
     3661 ggcggcgagc gaggcgatgt tgacgatcga gccgcctccc ccctgacgca tcgccggcac
     3721 gacggccttg caacaattcc aaatgccttt gacattgacg gtcatcgccg cgtcccagtc
     3781 ctgctccggg atctgattga accgcccgcc gcgtaacgat ccgtacagtg cggcgttgtt
     3841 caccagtcca tcgatccggc caaaggcgtt aagtgccgcg gcgaccatcg cctcaaccga
     3901 agccatgtcg gcgacgtcga gttttaccga tacgccgcct tggatcgagc aatccagcac
     3961 atcgccgccg acgatgtgcg ctcccgccgc gccgaggctt ttcgcatatt ccaggccaag
     4021 gccgcgagcc gcgccggtga tcaggatgac tttgccggtg acactcatga tccgctccct
     4081 gtcgttggga acgacgatgc ggccggttgc ccggaggcgc aatcccgtgc cagaacctcg
     4141 tcgattgcgg cggaggggcg gaccatggca ccaaatacca aacgcgtgtt ctacgtgaat
     4201 gcgttgtcgc atgacgtgta tttggagatc ctggcgaagc ggccggacgt ccagatcgac
     4261 aagctggtca acgacagccc ggaggatgaa gccgcgcccg tcctggccca cgcccatgcg
     4321 tatcaaatcg gttcgtcccg ccaggaactg gcaatgaagt atcaaggcta cacgccgctg
     4381 ttggagcgtt gtccgaacct cgtcgtgctg tcgaccaacg gagccggctt cgacacgatc
     4441 aatctggagg acgccaccaa agccggcatt gccgcggtga accaggccgg cggcaacaag
     4501 gaaggcgtcg ccgagcacgt gatggcgatg atgctttcac tgtcgaaacg catcatgttg
     4561 accgaccatc agatgcgccg aggcggcgac tataaccgcc gtgacttcat gggtgacgac
     4621 gtgctcggcc gcaccatcgg catcatcggt ttgggcaatg tcggctctcg cgtcgccgag
     4681 ttgtgccgcg ggctgtttca gatgcgcgtg ctggcctacg acccgtatct gacggcggag
     4741 gtgatgcgcc agcgcggtgc agaaaaagtc gcgacattgg aggagctgct gcgccagtcc
     4801 gactacgtat cgaccaattg cccgcacact gccgagaccc gcggcatgat gggtgccgcc
     4861 gcgttcgcca tgatgcagcc gcacgcctat tacatcacca ccgcccgcgg cggcattcat
     4921 gatgaggccg cgctggccga ggcattgggg aaaaagcaaa ttgccggcgc cggtctggat
     4981 gtctgggagg atgaaccgcc tccgaccgat catcctttga tgcagttcga caacgtgttg
     5041 gtgagcccgc acaccgccgg cattacgcgg caatcgcgct acaacatcgc gaagattgct
     5101 gctgagcaaa tgttggacat tctggatggc aagaagccgc cgcggctgct gaatcccgag
     5161 gtgtggccag cgtatcagga ccgattcgag cagatcatgg ggttccggcc ggaaggccag
     5221 ggcaacattc ccgtgcagta acaggccttt cggttcgaac gagcaaggta tccgaaagct
     5281 cgtccgtggg tcaggatttc tcgagggctg cgtcgcggac atgccgcaca catcccggcc
     5341 ttcgcttgct tgtttcgtcg caacaatgct ttgccgcaga tgcaagtaga tggacgccga
     5401 tttacgcaga ttgacctgat tactacctcg caagcaattc aacgaatctg cgtgcatcag
     5461 cgttcatcgg cttgcatctg cggtaaagct cttcttgcag agttcacaac gcacgaccgg
     5521 cctggaacgt aatacactgc agcccgcgaa ggccgggtca aagatcgccc tcaatggatc
     5581 gctgccactc ccgcgaccgg cacccctgac gcacccggcc ttcgagtgag aagcaaagcc
     5641 tgcgcctcct ccagccgctc cgcattgagc agcgccttca gcaacgtgaa ctcgatcagg
     5701 tcgtgctgcg cgcggctgcc gccaatgcgt tcgttttgac ccgccaacgg cgccagcgcc
     5761 gcaaccgccg ccgcaaaatc tccacgttcg aatgccgcaa accctcgcga caacgcaggc
     5821 aaatatgtgc cggataaata gcgcccgtct cgtgccatat cctcgatctg gcttgcacga
     5881 gctccatcct caccggcaac ggcctgcgcc agcacgacgt gcagatcagc cagcccactg
     5941 cccggtcgag gcagcgcatt gtcggcatat tccgccagcg cctgccacgc cgcttcatcg
     6001 cgcggccggc cagccagttc cgaccgccac aaatacgctg caccgtccga catcttctgc
     6061 tgcgggccac cgctgtgctt ttccaacgcc atggcgtccc gaaacaaatg cgacgcggcc
     6121 tcccagtt
//
LOCUS       DATAVD010000759         2988 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1373340, whole genome shotgun sequence.
ACCESSION   DATAVD010000759 DATAVD010000000
VERSION     DATAVD010000759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2988
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1373340"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1272
                     /locus_tag="VHX39_14450"
     CDS             <1..1272
                     /locus_tag="VHX39_14450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019090759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HEX3992368.1"
                     /translation="MDAAAAREAARKARELTRRKGVLDVSTLPGKLADCQERDPAKCE
                     IFIVEGDSAGGSAKQGRDRKFQAILPLKGKILNVERARFDRMLGSQEIGTLITALGTG
                     IGPGAVEQGGFDAGKLRYHRIVIMTDADVDGSHIRTLLLTFFFRQMRELVERGHLYIA
                     QPPLYRAKRGNDERYLKDDGALESFLLDKALADARLTYANGDVHEKEDLRREVTLLRE
                     ASHNLKRLSSVIPVALLEQAAIAGVLTSDAERATSAAPDFVKRLNEVSLPTERGWVAS
                     ADHGLTLSRTVRGVAERYALEPSALRSAEARWLAERATALAQRFSVPAKLKLDSQEPS
                     VAGPATAYDRIIAHGRRGLSVQRFKGLGEMNPDQLWQTTLDPSIRTLLQVKVGDSEDA
                     AQVFSTLMGDVVEPRRDFIVGNALKVANLDV"
     gene            complement(1278..1967)
                     /locus_tag="VHX39_14455"
     CDS             complement(1278..1967)
                     /locus_tag="VHX39_14455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992369.1"
                     /translation="MCALAHKLEERGFSTVVIASVRVQAEKTCPPRALWTSAMLGRPV
                     GEPNDPPFQLRTIRAALALLLRTDGPVILEDFPDDPPGWPDNPNWVAPTTTQSDDFNN
                     ELTALLPRWQAAQTRCGRTSVGLGFQAPSEWPAFADAVLAGSLPTIPQLPTTALAVRF
                     MCDDIKALYGEAAQATGPAPSANQVDTWFWRQTAAGALLRNLRQTAMASENNALKTVG
                     GRFFVPTPWIV"
     gene            complement(1986..2405)
                     /locus_tag="VHX39_14460"
     CDS             complement(1986..2405)
                     /locus_tag="VHX39_14460"
                     /inference="COORDINATES: protein motif:HMM:NF019003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050485 - oxidoreductase activity, acting
                     on X-H and Y-H to form an X-Y bond, with a disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/sarcosine/betaine reductase
                     selenoprotein B family protein"
                     /protein_id="HEX3992370.1"
                     /translation="MLNLPCPAFDSTPFVSGPPLSERRVAILTSAALIKRGDQPFPFG
                     SGEVRFIPADIKPNDLLLSHVSINFDRAGWQRDINTVFPIDRLRDLAATGEIGGVADT
                     HYTVMGSTDPAAMEEAVDQIAGQLKQERIDSVLLTPV"
     gene            2578..>2988
                     /locus_tag="VHX39_14465"
     CDS             2578..>2988
                     /locus_tag="VHX39_14465"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3992371.1"
                     /translation="MPTGKYRIGRRGALALTAAAALPARRSAAQAAARTLRYVPYSNL
                     IVMDPVWSISIIGLEHAYMTCDQLFGLDQTYTAQPQMAAGHELSDDRLRWRFTLRDGL
                     RFHDNEKVRAADCVASIGRWAKRDPFGQRMAARMD"
BASE COUNT          506 a          796 c         1129 g          557 t
ORIGIN      
        1 atggacgccg cggcggcgcg tgaggctgcc aggaaggctc gggaattgac ccggcgcaaa
       61 ggcgtgctgg acgtgtcgac gctgcccgga aagctggccg actgtcagga gcgcgatccg
      121 gccaagtgcg aaatcttcat cgtcgagggt gacagcgccg gcgggtcggc caaacagggc
      181 cgcgaccgga aattccaggc gatcctgccg ctgaagggca agatcctgaa cgtggagcgg
      241 gctcggttcg accgcatgct gggttcgcag gaaatcggca cgctgatcac cgcgctgggc
      301 accgggatcg ggccgggggc ggtcgagcaa ggcgggttcg atgcgggcaa gttgcgctat
      361 caccggatcg tcatcatgac ggacgctgat gtggacggat cgcatatccg gacgcttctg
      421 ctgacgtttt tcttccggca gatgcgcgaa ctcgtggagc gcgggcattt gtatatcgcg
      481 cagccgccgt tgtaccgcgc caaacgaggg aacgacgagc ggtacttgaa ggacgacggg
      541 gcactggaat cgttcctgtt ggacaaggca ctggcggatg ctcgtttgac ctatgccaac
      601 ggcgatgtgc atgaaaaaga ggatctgcgg cgcgaggtga ccttgctgcg ggaggcgtca
      661 cacaatctga agcggctttc ctcggtcatt ccggtggcgc tgctggaaca ggcagcgatc
      721 gccggtgtgc tgacgtccga cgccgagcgt gcgacatctg ccgcaccgga ttttgtgaag
      781 cggttgaacg aggtgtcgct gccgaccgaa cgtggttggg tggccagcgc cgatcatggg
      841 ttgacgctgt cccgcaccgt gcgaggcgtg gccgaacggt atgcgctgga gccgtcggcc
      901 ttgcgcagtg cggaggccag gtggctggcg gagcgggcaa cggcattggc gcagcgtttc
      961 agtgtgcccg cgaagctgaa gctggattcg caggagcctt cagtggcggg gccggcgacc
     1021 gcgtatgacc ggatcatcgc gcatgggcgg cgtggactgt cggtgcagcg gttcaaaggg
     1081 ttgggcgaga tgaaccctga ccagctgtgg cagacgacgc tcgatccgtc gatccgcacg
     1141 ctgctgcagg tgaaggtcgg ggattcggaa gacgccgccc aggtattcag cacgttgatg
     1201 ggcgacgtcg tggagcctcg gcgagacttt atcgtgggaa atgcgctgaa ggtggcgaac
     1261 ctggacgtgt aggtttgcta cacgatccag ggcgttggca cgaagaagcg tccgcctacg
     1321 gtcttgaggg cgttgttttc gctggccatg gcggtttggc gtagatttcg cagcagtgca
     1381 cccgcggcgg tttggcgcca gaaccacgtg tcgacctggt ttgccgaggg ggctgggcca
     1441 gtggcctggg cggcttctcc gtacagcgcc ttgatgtcgt cgcacataaa ccggacggcc
     1501 aaggctgttg tggggagctg gggtattgtt ggcagagaac cggccaggac ggcgtcggcg
     1561 aaggctggcc attcgcttgg ggcttggaag cctaatccca ccgaggtgcg gccgcagcgt
     1621 gtttgggctg cctgccaccg cggaaggagg gcggtcagtt cgttattgaa gtcatctgac
     1681 tgtgttgttg tcggggcgac ccaattgggg ttgtccggcc agccgggggg gtcatcgggg
     1741 aagtcttcga ggatgaccgg gccatcggtt cgtagcagca acgccagggc tgcgcggatg
     1801 gtgcgcagtt ggaatggcgg atcgtttggc tcgccgacag gacgaccgag catggcggag
     1861 gtccagaggg cgcggggggg acaggttttt tcggcttgca cgcggacgga ggcgatgacg
     1921 accgtcgaga aaccgcgttc ttccagctta tgggccagcg cgcacacggc gcgcgtgcaa
     1981 agcggtcaga caggggtgag caggacggag tcgatgcgtt cctgcttcag ttggccggcg
     2041 atctggtcga cggcttcttc catcgcggcc gggtcggtgg agcccatgac ggtgtagtgg
     2101 gtgtcggcga cgcccccgat ttcgccggtt gccgcgaggt ctcgcaggcg gtcgatcggg
     2161 aagacggtgt tgatgtcgcg ctgccagccg gctcggtcga agttgatgga gacgtggctg
     2221 agcaggagat cgttcggctt gatgtcggcg gggataaagc ggacttcgcc ggagccgaag
     2281 gggaatggct ggtcgccgcg cttgatgagc gccgcactgg tgagaatggc gacgcggcgt
     2341 tcggacaaag gcgggccgga gacgaagggg gtgctgtcga acgccgggca tggcaggttc
     2401 agcactgtgt cgcgtgtggg ctgggggatg tcctcgggac gtgccatgtg gaggactgtg
     2461 tcacacagat cggtgtggcg caagggggtt ggtggctctt tccgccattt ggcaaagcga
     2521 aggatatggg ctttgctccg cgcgagtccg gaacaacgga cgacggggag agacgtgatg
     2581 ccgacaggca aatataggat cggccggcgc ggcgcgctgg ctttgaccgc ggcggccgcg
     2641 ctgcccgcga ggcgttccgc cgcgcaggcg gccgcgcgaa cgttgcgcta tgtgccgtat
     2701 tccaacctta tcgtcatgga tccggtctgg tcgatctcca ttatcgggct cgagcacgcc
     2761 tatatgacct gcgaccagct ttttggattg gaccagacct atacggcgca gccgcagatg
     2821 gcggccgggc atgagctttc ggacgatcgg ttacgctggc gtttcacctt gcgcgatggc
     2881 ttgcgcttcc atgacaatga gaaagtgcgg gccgcggact gcgtcgcttc gatcggccga
     2941 tgggcgaaac gggatccatt cggccagcgg atggcggcgc gaatggat
//
LOCUS       DATAVD010000760         1882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2118333, whole genome shotgun sequence.
ACCESSION   DATAVD010000760 DATAVD010000000
VERSION     DATAVD010000760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2118333"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..397)
                     /locus_tag="VHX39_14470"
     CDS             complement(<1..397)
                     /locus_tag="VHX39_14470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992372.1"
                     /translation="MDPTIGHDQSSEPFRDKFVLFLKEVLQRFATTTPGYVHDRRSRW
                     AYAFNPVPDGNPEKPVYATMAALRAPNFAALRVGVTEGGQVVVEVEHRQVVMPYITND
                     VENPNEFPRIQNGLRQIIEHFERMAGIRRH"
     gene            945..1109
                     /locus_tag="VHX39_14475"
     CDS             945..1109
                     /locus_tag="VHX39_14475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992373.1"
                     /translation="MKKFMLAAIAALSLGAGSAYAMQPQNSPHQTLPGYQSSYFYGTT
                     GSAAGDGGGN"
     gene            complement(1242..1451)
                     /locus_tag="VHX39_14480"
     CDS             complement(1242..1451)
                     /locus_tag="VHX39_14480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992374.1"
                     /translation="MRRAKTPRPMAAKAAKMPTVVPAAGQLSLDFAGRAAAEVPKVAA
                     QTPAKGTPCRPARRTALGIPEKPKS"
BASE COUNT          344 a          624 c          517 g          397 t
ORIGIN      
        1 cgtggcgtct aatgccggcc attctctcga aatgttcgat tatctgcctc agtccattct
       61 ggattctggg aaattcattc gggttttcga catcatttgt aatgtatggc atcaccacct
      121 gacggtgctc gacttcaaca acgacttgtc cgccttccgt cacaccgacg cgtaaagccg
      181 cgaaattggg cgctctgagc gcagccatgg tcgcatacac tggcttttct ggatttccat
      241 ccggcaccgg gttaaaggca taggcccatc tcgaccgtct atcatgcaca taccccggcg
      301 ttgtcgtggc gaatctctga agcacctcct tcagaaagag gacaaacttg tctcggaatg
      361 gttcgctgga ttgatcatga ccaatcgtcg gatccatctt ctctatcctc aacagcgctt
      421 gatcagaagc gttgggtgct gtcggcttcg acgaagaccg gccgcgccac cgacgcgatc
      481 atgggtcaga gaacctcact attgttcgaa cctcaccata cttcgcaagc tgacactcaa
      541 cgtcatgcgc gcgtccgaca cgatatcttc ctgcgctgca agcgcaagcg ctccggtggt
      601 ccgacgactt cgcttgctac agcagccggc ccgcagccgg tgcggtctcc gttttgccgt
      661 cctcttttgc cccctgtgcc acgacccgta gcgcaccgtc aggcactgga cgttgcagct
      721 tcaacgcatc agcgacaatc gcgggaccgc cgccatcacg ccaggcaggc gctctgccaa
      781 gtctatttgt gctatccctg cacaaatatt gtgcccagga accggatttt atcctgacgt
      841 gatgaggcct atctccccgt gcgtcggcgg gaaacaccga caaaccgccg aaccccatca
      901 caccggcccg tccgacccgg caggccgcca cacggagaac gacaatgaag aagttcatgc
      961 ttgcagccat cgccgcgctc agccttggcg ctggcagcgc ctatgccatg cagccgcaga
     1021 attcgccgca tcagacgctt cccggctatc agtcgagcta tttctacggc accaccggct
     1081 cggcggccgg tgacggcggc ggaaactgac gccgctaccc gccagggacg cagcaggagc
     1141 cggccgcaag gtcggtcctt ttgcttgagc cggcgccggc aaccgctggc tcgtggcaac
     1201 caaaccaccc ttggcttgcc cagcccggtc cggctgcgcg gtcagctctt cggcttctcc
     1261 ggaataccca gggctgtccg gcgtgccggt cggcaaggcg ttcccttcgc cggggtctgc
     1321 gctgccacct ttggtacctc ggctgcggcc cgtcccgcga aatccaggct cagttgtccg
     1381 gccgccggca caaccgtcgg catttttgcg gccttggctg ccatcggcct gggtgtcttc
     1441 gcccgcctca tgtctgcctc ctccgccgtt gaggtactgc tggccatcca gcgcgaggca
     1501 gagcctgact gggcggggta ccgccggcaa ggacaatccc acccgcgatg ccagcttgcg
     1561 cgcggcttgg cggctgcggc aattttatgc cttggttgac tctgaaccgg tagactccag
     1621 gcttggatct atcctgtccg ttcgtctggc tcgttccgcg cgcgacgagg acgttgcgtt
     1681 cattctggcc atgccatgcc gctgggaaaa tcgaacgttt ccggtgtcgc agatcggagc
     1741 attcgttacg aagcacttgg acaatcatcg cattggagca gcacgcgatg acgttgggcg
     1801 aaaacatcat tttgttacgc aacgccatga cgaccgacag atgctcagcc gtcaccgtgc
     1861 gtatcgtcaa actcagaacc gc
//
LOCUS       DATAVD010000761         3105 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_73314, whole genome shotgun sequence.
ACCESSION   DATAVD010000761 DATAVD010000000
VERSION     DATAVD010000761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3105
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73314"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(222..788)
                     /locus_tag="VHX39_14485"
     CDS             complement(222..788)
                     /locus_tag="VHX39_14485"
                     /inference="COORDINATES: protein motif:HMM:NF018482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HEX3992375.1"
                     /translation="MGRLVRGNMMTAKCDVARRTRPFASALAGLAILLAAVTLFSGKV
                     AAQGAVRSVHGDWQIRCETPPGAQSEQCALMQSVTAEDRPNVGLTVIVLKTSDQKSRL
                     MRVVAPLGVLIPSGLGLKIDDKDVGRAGFVRCLPNGCVAEVVMDDNLISQLRNGKTST
                     FIIFQTPEEGIGFPMSLNGFGEGYDKLP"
     gene            1165..2013
                     /gene="coxB"
                     /locus_tag="VHX39_14490"
     CDS             1165..2013
                     /gene="coxB"
                     /locus_tag="VHX39_14490"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HEX3992376.1"
                     /translation="MKVLSHLAAIAATVVALFAGVSAAYAGLGQPTPWELGLQDAASP
                     VMADITTFHNYLLWIITAITVFVLVLLLICIVRFNARANPTPARTTHNTPIEVIWTVV
                     PVLILVAIAIPSFRLLFTEIDVPTPDLTVKATGKQWYWSYAYPDNGNFEFDSLIVADK
                     DLKPGDLRLLTVDNELVVPVNKVVRVLVTGADVIHSFSVPSFGIKIDAVPGRINETWF
                     KATMTGVFHGQCSQLCGKDHSFMPITVRVENDKDFTAWVAQAKQKYAGADVAPANMMA
                     ANALTK"
     gene            2089..>3105
                     /locus_tag="VHX39_14495"
     CDS             2089..>3105
                     /locus_tag="VHX39_14495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX3992377.1"
                     /translation="MAQADHGHDDSGHAIPHGWRRYLYSTNHKDIGTMYLVFAMTAGV
                     IGGALSIAIRAELMYPGLQFFHETHYYDVAVTAHGLIMIFFMIMPAMIGGFGNWMVPL
                     MIGAPDMAFPRMNNISFWLLPASFALLLSSFFFEGEPGAMGAGTGWTLYAPLSTYGHP
                     GPAVDFVILALHLAGASSILGAINFITTIFNMRAPGMTLHKMPLFVWSQLVTVFLLLL
                     ALPVLAGAITMLLTDRNFGTTFFDPQGGGDPLLFQHLFWFFGHPEVYILILPGFGMIS
                     QIVSTFSKKPVFGYLGMVYAMVAIGGIGFVVWAHHMYTVGMSASVQAYFIAATMVIAV
                     PTGVK"
BASE COUNT          576 a          976 c          927 g          626 t
ORIGIN      
        1 gctttggtgg gccacctttc ctgtcatgcc ccgcgaaggc ggggcatcca gtactcaccg
       61 gtctttgagc aaaattactg gcgtcggcga ttactggatc gtccgcctgc gcggacgatg
      121 acacgccaga aatatcgccc cgccccctat tgcagggcgg gatgaagtaa cgcgtcgctg
      181 tttgacatcg tggaaaaagt agaacgcgcg caagcacgcc gttacggcag cttgtcgtag
      241 ccctcgccaa agccattcag gctcatggga aagccgatac cctcctcggg cgtctggaat
      301 atgatgaagg tcgaggtctt gccgttgcgg agctggctga tcaggttgtc gtccatgacc
      361 acctcggcga cgcagccgtt gggcaggcag cgcacgaacc cggcgcggcc gacgtcctta
      421 tcgtcgatct tcagcccaag cccggatgga atcagcacac cgagcggagc caccacccgc
      481 atcagccggc ttttctggtc gctggtcttg agcacgatga ccgtgaggcc gacgttcggc
      541 cgatcctcgg cggttacgct ctgcatcagg gcgcattgct cgctttgtgc cccgggtggg
      601 gtttcgcagc ggatctgcca atcgccgtgg accgaacgga cggcgccctg agcggccact
      661 ttgccggaaa acagggtcac ggccgccagc aggatggcga ggcccgcaag cgcggaggca
      721 aagggccgcg tccggcgcgc gacatcacat ttcgccgtca tcatgtttcc cctgacgagc
      781 cgccccaagg cattgcatcg cgaatcagca cgctcgaccg ccgcgcaagc ctgcctacat
      841 tgagaatcca ccgtgtcaag gcgatccaaa tcaaggcatt gtggctgcgc caaggtgaat
      901 tattcggctc ccgcgcgcct tggcgtcaca ccccgcataa ggcttatccc gccctgtcaa
      961 atcgcgctta acagtgcatt gcagcagcca cggatttatg gtttgaggag ttgggattcc
     1021 cccatcccgc cgaagcctgc caccagaccc gtttccgagc gaggcgcgca ggcggcgtca
     1081 tactgctgcg gtcggcaacg gacatagtct gcaccgcccg tggacggtca tggccaagat
     1141 cagaaacagg gagctaagag accgatgaag gtgttgtctc atttggccgc cattgcggcg
     1201 actgtcgtgg ccctgtttgc gggagtgagc gctgcttacg ccgggctcgg tcaaccgaca
     1261 ccctgggagc ttggcctcca ggacgcggct tcaccggtca tggcggacat caccactttc
     1321 cacaactatc tgctctggat catcacggcg attaccgtct tcgttctggt gctgctgctg
     1381 atctgcatcg tgcggttcaa tgcccgcgcc aatccgacgc cggcgcgcac gacccacaac
     1441 acccccatcg aggtgatctg gaccgtcgtg ccggtcctta ttctcgtggc aatcgcgatc
     1501 ccgtcgttcc ggctgctgtt taccgagatc gatgtgccga cgccggacct cacggtgaag
     1561 gccaccggca agcagtggta ctggagctac gcctatcccg ataatggcaa tttcgaattc
     1621 gactcgctga tcgtggccga caaggatctc aaacccggcg atctgcgact cctcacggtc
     1681 gacaacgaac tggtcgtccc ggtgaacaag gtcgtacgcg tgctggtaac gggggcggac
     1741 gtcatccact cgttctcggt gccctcgttt ggcatcaaga tcgacgccgt accgggccgc
     1801 atcaacgaga cctggttcaa ggcgacgatg accggggtgt tccacggtca atgctcccaa
     1861 ctgtgcggca aggatcattc gtttatgccg attacggtcc gggtggagaa cgacaaagat
     1921 ttcaccgcgt gggttgcgca ggcgaagcag aagtatgccg gcgccgacgt cgctccggcc
     1981 aacatgatgg cggcaaacgc gctgacgaag tgaacaccgg aaacaaaacg acgtaactcg
     2041 gccgaagaag acaggcggcg gctaacgaag gaactggcaa tggatacgat ggcacaggcg
     2101 gatcacggcc acgacgacag cggtcatgct attccgcacg gctggcgccg ctatctctat
     2161 tcaacgaacc acaaggacat cggcacgatg tacctggtgt tcgcgatgac ggccggcgtg
     2221 atcggcggcg cgctgtcgat cgcgatccgg gccgaattga tgtatcccgg cctgcaattt
     2281 ttccacgaga cgcactatta cgacgtcgcc gtcaccgcgc acggtctgat catgatcttc
     2341 ttcatgatca tgcctgcgat gatcggcggc ttcggcaact ggatggtgcc actgatgatc
     2401 ggcgcgccgg atatggcgtt cccgcgcatg aacaacatct cgttctggct gctgccggcg
     2461 tcgttcgcac tgctgctgtc gtcgttcttc tttgaaggtg agccgggcgc aatgggcgcc
     2521 ggcaccggat ggaccctcta tgcaccgctg tcgacttatg gccatcccgg cccggcggtg
     2581 gatttcgtga tcctggcgct gcatcttgcc ggtgcttcgt cgatcctcgg cgccatcaac
     2641 ttcatcacca cgatcttcaa catgcgcgca cccggcatga cgttgcacaa aatgccgctg
     2701 ttcgtgtggt cgcagctcgt gacggtgttc ctgctgctgc tggcgctgcc agtgctcgcc
     2761 ggtgcgatca ccatgctgct gactgaccgc aatttcggca cgacgttctt cgatccgcag
     2821 ggcggcggcg atccgctgct gttccagcac ctgttctggt tcttcggcca ccccgaagtt
     2881 tacatcctca tcctgccggg cttcggcatg atcagccaga tcgtgtcgac gttctcgaag
     2941 aaaccggtat tcggctatct cggcatggtc tacgcgatgg tggcgatcgg cggcatcggc
     3001 ttcgtcgtgt gggcgcacca catgtacacc gtcggcatgt ccgccagcgt gcaggcctat
     3061 ttcatcgccg ccaccatggt gatcgcggtg cctaccggcg taaag
//
LOCUS       DATAVD010000762         3202 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3235060, whole genome shotgun sequence.
ACCESSION   DATAVD010000762 DATAVD010000000
VERSION     DATAVD010000762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3202
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3235060"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..308)
                     /locus_tag="VHX39_14500"
     CDS             complement(<1..308)
                     /locus_tag="VHX39_14500"
                     /inference="COORDINATES: protein motif:HMM:NF024846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3992378.1"
                     /translation="MQHILVVGAGFAGATYARELAEHGYHVDVIDKRPHVAGNAYDET
                     SDSGVRVHRYGPHLFHTNNANVVEWLMRFGTFVPYEHRVSVVLAGGAFVPLPINRQTI
                     "
     gene            819..1181
                     /locus_tag="VHX39_14505"
     CDS             819..1181
                     /locus_tag="VHX39_14505"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3992379.1"
                     /translation="MAIVLDHTVVPAHDNEASAGFFARIFGLRYEGTVSHFAPVRVND
                     TLVMDFDTCATFERHHYAFKVGDPEFDAIFQRVQDEGLAYGSGPRSPDNMTINHRGGG
                     RGFYFKDPNGHLLEVLTV"
     gene            complement(1255..2370)
                     /locus_tag="VHX39_14510"
     CDS             complement(1255..2370)
                     /locus_tag="VHX39_14510"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3992380.1"
                     /translation="MQPTIANRRALYSQNTLKLGLFGANCSSGRAVTQVPERWSGSWP
                     DCLRLAQMADAAGIEFMLPVGRWKGYGGDTDYQGETLETVTWASGLLAATQRITVFGT
                     VHAPMFHPLVAAKQFVTADHIGNGRFGLNVVCGWNQDEFTMFGADLRDHEARYRHAQE
                     WLDVIKQAWTAEEEFDFDGSFIQLRQVRAKPKPVGGARPIIMNAGASPTGQAFAIRNC
                     DALFSMTPRGKVAEFTAHVARVKTQAREQGRELEVYTVAVITCRATKGDADAYYRHCV
                     IDNADWAAVDRIMAMRGDTRERWPHDFEERRLHQANGMGGVPITGDPDIVAHELAQLA
                     AAGARGIALSFVNFTDELPYFCAEVLPRLQRLGLRAT"
     gene            complement(2820..2957)
                     /locus_tag="VHX39_14515"
     CDS             complement(2820..2957)
                     /locus_tag="VHX39_14515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992381.1"
                     /translation="MSPAQFAAARELVIAILLLVSLCALPGRIMPERAGGTARRLHVA
                     C"
BASE COUNT          636 a          975 c          983 g          608 t
ORIGIN      
        1 ttgatggttt gccggttgat cggcagcgga acgaacgcac cgccggcgag caccacgctg
       61 acccgatgtt catagggtac aaaggtgcca aatcgcatca gccactcgac cacgttggca
      121 ttgttggtgt gaaacaaatg cgggccgtac cggtgcacgc gaacgccgct gtcggaggtt
      181 tcgtcgtagg cattccccgc gacgtgcggg cgcttgtcga tcacgtcgac gtggtagccg
      241 tgttctgcga gttctcgggc ataagtggct cccgcgaagc cggcaccgac aaccaggatg
      301 tgttgcacgc cggcctcctg caacttaaat ggcgatcacg gcgcgcggac cggtgacgag
      361 attgctgcgt tgcattcgca atgaccgggg gagttgcaca gctcaggctc caataacagt
      421 gggtataggg aagattgtcc cgtagccgga attctcggtc gtgcgcccaa tgttcatgct
      481 ttcgcccgtg cctcagattt accgctgaaa atcgtgccca ttcgaccgaa atagtgccgt
      541 acgcgcagct tcccgcccgt cggtcctgac gaacgccgcc aaaagcccag tttataactg
      601 tcatacaggc cttcgcaagc aacttcgcga ctccccgaca atgttcctac cgatgggcaa
      661 ccgaactgcc tgccgttcaa gggcaccaat gcaggggaca attggctttg ttcaatgatt
      721 tatgctaatc cctgcggcag gaaaccgacc ggtcgccgca gacggaccga agcagaggcg
      781 gccaaccgcg ctcggtgcgt ctattcaggg aggcaatcat ggccattgtg ctcgaccaca
      841 ccgtcgttcc ggcgcacgac aatgaggcgt ccgccggttt tttcgcccgc atcttcgggt
      901 tgcgctacga aggaaccgtg tcgcacttcg ctccggtcag ggtgaacgat accctggtca
      961 tggatttcga cacctgcgcg acgttcgagc ggcatcatta cgcgttcaag gtcggcgatc
     1021 cggaattcga tgcaatattc caacgagtcc aggacgaagg gcttgcctat ggcagcggcc
     1081 caaggtcgcc cgacaacatg acgatcaatc accgcggcgg cggacgtgga ttctatttca
     1141 aggatcccaa cggccatttg ctggaggtcc tgaccgtctg aatcgttgca gttccgctcg
     1201 ttcgcaggtg atcgcaagcg cacgtgcttt atcgatggcg ccaaccgggc aacatcacgt
     1261 ggcgcgcagt ccgagacgct gcagccgcgg gaggacctcg gcgcagaaat agggtaactc
     1321 gtccgtgaaa ttaacgaacg acagcgcgat gccgcgagct ccggctgcag caagctgcgc
     1381 gagctcgtgt gcgacaatgt cagggtcgcc ggtgatcgga acgcccccca tgccgttggc
     1441 ctggtgcagg cgccgttcct cgaagtcatg cggccaacgc tccctggtgt cgccgcgcat
     1501 cgccatgatc cgatcgaccg cagcccagtc ggcattgtcg atgacgcagt ggcggtaata
     1561 tgcgtcggcg tcgcctttgg tcgcgcggca ggtaataacg gcgacggtat agacttcgag
     1621 ttcgcgcccc tgctctctcg cctgggtttt cacgcgtgcc acatgcgcag tgaactcggc
     1681 caccttgccg cgcggagtca ttgagaacaa tgcgtcgcag ttacgaatgg caaacgcctg
     1741 accggtcgga gacgcgccgg cgttcatgat gatcggccgc gcaccgccaa ccggttttgg
     1801 tttggcgcga acctgcctga gctggatgaa gctgccgtcg aaatcgaatt cttcctctgc
     1861 tgtccacgcc tgtttgatca catccagcca ctcctgggcg tggcggtagc gcgcttcatg
     1921 gtcgcgcagg tcggcgccga acatggtgaa ttcgtcctgg ttccagccgc aaacgacgtt
     1981 cagtccgaaa cgtccgttgc cgatgtgatc cgcggtgacg aattgttttg cggcaacgag
     2041 aggatggaac attggcgcgt gaacagtgcc gaaaactgtg atgcgttgcg tcgcggcgag
     2101 caggccagaa gcccaggtaa cggtttccag ggtctcgcct tggtagtcgg tgtcgccacc
     2161 gtaacctttc caacggccga ccggcagcat gaactcgatg ccggctgcgt cggccatctg
     2221 cgcgaggcgt agacagtccg gccaactccc gctccaccgt tcggggactt gtgtcacggc
     2281 gcggcctgag gagcagttgg cgccgaacag gccaagctta agtgtgtttt gcgaatagag
     2341 ggcgcggcgg ttggcgatgg tgggttgcat ggcggctttc gcgtcagggg acgtaacgga
     2401 tcggcagcgc aacctctatc ggcccgccgg cgccggggtc gttgcaccaa tgttcggatc
     2461 gagcccgcgg tgctgagcac tcaaccggat gcggcagtcg gcgtaatcgt gagaaccgaa
     2521 tatcaggcca tatgaccggc attgcttgtc atcgacatca gcgaaagcag cgggatcgcc
     2581 gcggcccacg ttggctggac ccggactgac ggcagcatga cctgcaacaa ccgggctcgc
     2641 ggcagtcaaa tcctgggcgc cgggcagaca gccacctcga taggagccac cggagcaatc
     2701 cacatgactc gagcatgcgt ccaaacccaa agccaggcac gtcacaatcg acgtcatgct
     2761 gatcagacgg aaaattcgat ccttcatcag gtcgacggta gaccggccca ggaaacgcat
     2821 caacacgcca cgtgcagtcg gcgcgcggtg ccgccggcgc gttccggcat gatcctgccc
     2881 ggcagcgcgc acaggctgac cagcaacagt atcgcgatca ccagttcgcg tgccgcggca
     2941 aattgggcag gcgacacaaa ccccaatcgg gcagttgggt gtatggggcc gcgccgacgt
     3001 gataacctcc acgtaacgcc gactttgatc agcaaagggg aaacaccatg tccggcagcg
     3061 tcctgcgcat tgagctcacc gaacgtctgg cgccggtgtt tgacggcaga cgttttggtc
     3121 ccgttggcac gtacgagtgt ttaagcggca cgatccacgg cgaactcgat ccgcttcacc
     3181 cgttgaacgc cgcgatcgtc aa
//
LOCUS       DATAVD010000763         4900 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3609756, whole genome shotgun sequence.
ACCESSION   DATAVD010000763 DATAVD010000000
VERSION     DATAVD010000763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4900
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3609756"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(319..1401)
                     /locus_tag="VHX39_14520"
     CDS             complement(319..1401)
                     /locus_tag="VHX39_14520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX3992382.1"
                     /translation="MRFRGAIIATAFLATPVVAMAQPITGLYIGAGAGLSFPKFSDLT
                     TQNPGYGNSHIKMNEGMGFNSNLAVGYGIGNGFRFEIEGDFDRNNIRDVHGTPYANSG
                     GTIRNWGVMANALYDLDVGLPWMYPYVGLGAGYQWTSLNPLYVNGPGFAASTTGQSGA
                     FAGQAIVGASFPIPNMPGLSFTVDYRVMDILGGGHYTGLVDNGGVISSSQLKQHSQIN
                     QDLVFGIRYAFNAPAPAAPAMAPAPTAVPAPAPARSYLVFFDWDKADLTARARSIVKE
                     AADNSTRVQVTRIEVNGYTDTSGTPSYNQGLSIRRAQAVASELVVDGVPKNVISIQGF
                     GETHLLVATGPGVREPQNRRVEIIIR"
     gene            1886..2506
                     /locus_tag="VHX39_14525"
     CDS             1886..2506
                     /locus_tag="VHX39_14525"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEX3992383.1"
                     /translation="MWYCINTIVNLVALHPAGALSVVFLAAIIEAVAVVGILIPGTPI
                     LMAVAGAAAMAGQPMLPFLALAILGAVVGDFLSYWVGKRFSVRLRQVWPFSRRPALME
                     NAGHFFDRYGFYSVALCRFVPVLRSTVPLVAGMAGMRQRRFVIANVASAFVWAPVHIY
                     PAQLAGLSIGRLRDGDWQSAAVWGVVLLIGCATAWLLHRVVITHTR"
     gene            complement(2508..3449)
                     /locus_tag="VHX39_14530"
     CDS             complement(2508..3449)
                     /locus_tag="VHX39_14530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3992384.1"
                     /translation="MWEPSQRYPDPNVQVLDPSFNALRLPLASVEQLATGCRWSEGPV
                     YFGDGRYVLWSDIPNDRILKWEEETGAVSVFRKTSWNANGNTRDRQGRLVTCEHRGRR
                     VSRTEYDGSITTLIDSYQGKRLNSPNDVVVKSDGSIWFTDPSFGISGYYEGEKADSEI
                     PAAVWRIDGQTGQASMMADDIEGPNGLAFSADESILYVVASRAEPSRLIRAFDVVDGG
                     KKLSNNRVFIDAKGGTPDGFRVDIHGNLWCGWGMGSAELDGVRVFDATGKPIGHIALP
                     ERAANLCFGGRFRNRLFMAASHGLYALYVNTQGALGG"
     gene            3587..4711
                     /locus_tag="VHX39_14535"
     CDS             3587..4711
                     /locus_tag="VHX39_14535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DSD1 family PLP-dependent enzyme"
                     /protein_id="HEX3992385.1"
                     /translation="MQQVPPAVPGMREDEIDTPALVIDLDAFESNLDTMAALLAPTGV
                     KLRAHAKTHKSPVIAKLQMARGAVGNCVQKVTEAEVLAWGGIPDILVSNEVVGAAKLA
                     RLCALSRIAKMAVCADDTSQVAAIETAARDAGIRMTVLVEIDVGAGRCGVQPGPDAVA
                     LATRIAASKHLIFGGLQAYHGSAQHKRTPAERRILVGDAVDASRRTVEQLRQQGLDCA
                     IVGGAGTGTFEIESKSGIYTEMQAGSYVFMDADYARNLDEAGTPVGTFRHALFVLSTV
                     MSQAQTGVAVLDAGHKAVAVDSGVPTVWQRPDIRYTSASDEHGKLQFGSETATPKVGE
                     KLRLIPGHCDPTVDKFDWYVGVRNGRVECLWPVAARGGLS"
     gene            complement(4708..>4900)
                     /locus_tag="VHX39_14540"
     CDS             complement(4708..>4900)
                     /locus_tag="VHX39_14540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992386.1"
                     /translation="SGNGIGYGVGQHGLIANVAANYTLTPQVEFYVNGLNILDSRFEP
                     VNGYQTPGPTVLAGVRMKL"
BASE COUNT          993 a         1520 c         1451 g          936 t
ORIGIN      
        1 ggccgaggtg acggacacgc cgggcggcaa tagacgccca tcgtggtcac cgcatagagg
       61 aaatcggcac cagcgtggcg attgagaacc tgatcccaga gacgctcttc cgaaacccgg
      121 tcgataatgt gtgtgtcttg catgatcggt aatttggtac cgccgtcact ctaccgccat
      181 ccggcgattg cggcgactca ccccccggac ggaaaagggc cccggacaga aaagggcccc
      241 ggacagaaaa gggccccgga cggaaaaggg ccggggaatt gctccccggc cccttctcat
      301 cacgccgttt ctgagaagtt agcggatgat aatctccacg cgccggttct gcggttcccg
      361 cacccccggt cctgtggcca ccagcagatg cgtctcgcca aagccctgga tgctgatgac
      421 gttcttcggc acgccgtcaa ccacgagttc cgacgccacg gcctgggcgc gccggatcga
      481 caggccctgg ttatacgaag gcgtgccgga ggtgtcggtg tagccgttga cctcgatccg
      541 ggtgacctgc acacgggtcg aattgtccgc cgcttccttg acgatcgacc gagcgcgggc
      601 ggttaggtca gccttgtccc agtcgaagaa caccagatag gaccgagccg gagccggcgc
      661 gggcacagcc gtcggagcgg gcgccattgc cggcgcagcc ggtgccggcg cgttgaatgc
      721 gtaacggatg ccgaacacca gatcctggtt gatctggcta tgctgtttca attgcgacga
      781 agagataacg ccgccattgt cgaccagccc cgtgtagtgc ccaccaccca ggatatccat
      841 tacacgataa tcgacagtga acgacagccc cggcatattc gggatgggga acgaagcacc
      901 gacgatcgcc tgtccggcga acgcgccact ttgaccggtt gtggaagccg cgaaacccgg
      961 tccgttaaca tacagggggt tcagcgatgt ccattgataa ccggcgccaa gaccgacgta
     1021 tggatacatc cagggaagcc cgacatcgag gtcatacagc gcattggcca tcacacccca
     1081 gttgcggatg gtgccgccgc tgttggcata gggcgtgcca tggacgtccc tgatgttgtt
     1141 gcgatcgaag tcaccttcga tctcgaagcg gaaaccattg ccgatgccat aaccgacagc
     1201 gaggttcgag ttgaatccca tcccttcatt catcttgata tggctgttgc cgtaaccagg
     1261 gttttgggtc gtcaggtctg agaacttcgg aaagcttaac ccagcgcctg ccccaatata
     1321 aagtccggta atgggctgag ccatcgccac gaccggtgtc gcgaggaaag ccgtcgcaat
     1381 aatcgcaccg cggaaacgca tgcgttgtac tccttattgg catctcaatc gtccaggata
     1441 ggacaaccgc atggaaccgg tcgctttcga gcggcccttg gggtgtggcg catattcgcc
     1501 ccgcgggccc gggcgacaaa tcaccacgac ttgaggatgg tcacgaaagg aggaagaacc
     1561 tgttcaattc gtcacatcca gaccacgccc tgaaaacgat tatcctcata agatattgtt
     1621 ttataaacat attaccaaca tccatcacag tccagtgcat gcaatggtct ttacaatttt
     1681 taacatctga cccgtaaaac gcccctcatc ggggcgtgca agatggcaac agatttttct
     1741 ttttcggacc cgcgggaaac cgacacgaca acgcatcatt atcgcccgtg acaaccgctc
     1801 cgccacagga tgaacacttc ctttcgatgg ctgaattcga cataatgccc gttacctttt
     1861 gcaacaggag cgtcacttca gtcttatgtg gtattgcatc aacaccatcg tgaacctcgt
     1921 cgcgctccac cccgccggcg cgttaagcgt ggtgttcctg gccgcgatca tcgaggctgt
     1981 ggcggtggtt ggcatcctga tcccgggaac accgatcctt atggcggtcg ccggcgcggc
     2041 ggcaatggcg ggccagccga tgttgccgtt cctggcgctg gcgatcctcg gtgcagtggt
     2101 cggcgacttc ctgtcgtatt gggttggcaa gcggtttagc gtccggctgc gccaggtctg
     2161 gccgttttcc cgccggcccg cgttgatgga aaacgcggga catttcttcg atcgctacgg
     2221 cttctacagt gtcgcactct gccggttcgt gcccgtgctg cgctcgaccg tgccgctggt
     2281 tgccgggatg gcgggcatgc ggcagaggcg attcgtgatc gccaatgtcg catccgcctt
     2341 cgtctgggcg cccgtccaca tttatcccgc tcaactggcc ggtctgtcga tcggccgtct
     2401 gagggatgga gattggcagt cagccgcagt gtggggcgtt gtcctgctga tcggctgcgc
     2461 caccgcctgg ctacttcatc gggtggtgat cacccatact cggtagctta tcccccaagc
     2521 gccccctggg tgttcacata gagcgcatac aacccgtggc tggccgccat gaacagccgg
     2581 ttccggaagc gtccgccaaa acacaaattg gcagcccgtt ccggcagcgc gatgtgacca
     2641 atcggcttgc ccgtcgcgtc gaacacccgc acgccatcca gctcggccga acccatgccc
     2701 cagccgcacc acagattgcc atggatatcg acacggaagc cgtctggcgt tccgcctttg
     2761 gcatcgatga acacgcggtt gttcgaaagt ttcttaccgc catcaacgac atcgaaagcg
     2821 cggatcagcc gggacggctc ggcacgggac gcaaccacat acaggatcga ctcatccgcg
     2881 gagaaagcga gaccgttcgg cccctcgata tcgtcggcca tcatcgacgc ctggccggtc
     2941 tgcccgtcga tgcgccaaac cgccgcggga atttccgagt ctgccttctc gccctcgtaa
     3001 tagccgctga tgccgaagga cggatcggtg aaccagatcg atccatccga cttgacgacg
     3061 acatcgttgg gtgaattcaa ccgcttgccc tggtaactat cgatcagggt ggtgatcgac
     3121 ccatcatatt cggtccggga gacacgccgc ccgcgatgct cgcaggtcac caggcgaccc
     3181 tgccgatcgc gtgtattgcc gttggcgttc caggaggttt tccgaaagac gctaacggcg
     3241 ccggtttcct cttcccattt caggatgcga tcgttgggga tgtcgctcca aaggacatag
     3301 cgtccatcgc cgaaatacac cgggccttca gaccagcggc atccggtcgc caattgctcg
     3361 accgacgcca gcggcaggcg caacgcgttg aagctggggt ccagtacctg gacgttcgga
     3421 tcaggatagc gctggctggg ttcccacatg gttgatttcc tccggttggt catggaggct
     3481 ggttctaaag caggttgctt cagtgcgaaa ccagtgcgca ccagcccggg ttgccgttcc
     3541 cctctgaagc agcgaaaatg caaaccattc ctgaaggaac aagccgatgc agcaagtgcc
     3601 tcccgccgtc cccggcatgc gtgaggatga gatcgacacc cccgccctgg ttatcgacct
     3661 ggacgccttc gaatcgaacc tcgacaccat ggccgcgctg ctcgcaccga ccggggtcaa
     3721 gctgcgggcg cacgccaaga ctcacaaatc accggtcatc gccaagctgc aaatggcccg
     3781 cggggccgtg ggcaactgcg tacagaaggt caccgaggcc gaggtgctcg cctggggcgg
     3841 catccctgat atcctggtca gcaacgaagt tgtcggtgcg gccaagctgg ctcggctttg
     3901 cgccttgtcg cgaattgcaa aaatggcggt ctgtgcagat gacaccagcc aggtcgccgc
     3961 gatcgaaacc gccgctcgtg atgccggcat tcggatgaca gtgctggtgg aaatcgacgt
     4021 tggcgcaggc cgctgcggcg tacagcccgg cccggacgca gtggcactgg ccactcgcat
     4081 tgccgcatcc aagcacctga tcttcggcgg attgcaagcc taccacggca gcgcccagca
     4141 caagcgcacg ccggcagaac ggcgcatcct ggtcggcgac gcggtcgatg cctcccgccg
     4201 cacggtggaa caactgcgtc agcagggatt ggactgcgca atcgtcggcg gcgccgggac
     4261 cggaacattc gagatcgaat cgaaatccgg catctacacc gaaatgcaag ccggcagcta
     4321 tgttttcatg gatgccgact atgctcgaaa tctagacgaa gctggaacac ccgtcggaac
     4381 gttccgccac gcgctgttcg tgctgtcgac ggtgatgagc caggcccaga caggagtcgc
     4441 cgtattggat gccggacaca aggcggttgc cgtggattcc ggggtgccaa cagtgtggca
     4501 acggccggat atccgttaca ccagcgcctc ggatgaacac ggcaagctgc aattcggcag
     4561 tgaaacggcc acgcccaaag tgggggaaaa gctgaggctg atccccggcc attgcgaccc
     4621 gactgtcgat aagttcgact ggtatgtcgg ggtacggaac ggccgggtgg aatgcctatg
     4681 gccggtcgcg gcgcgcggcg ggctcagcta aagcttcatc cgcaccccag ccagcacggt
     4741 cgggcccggt gtctgatagc cattcaccgg ctcgaaccgc gaatcaagga tattcaagcc
     4801 gttgacgtaa aattcgactt gcggcgtcaa cgtgtagttg gccgcgacat tggcgatcag
     4861 cccatgctgg ccgacaccat agccaatgcc attgccgctg
//
LOCUS       DATAVD010000764        11389 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_443527, whole genome shotgun sequence.
ACCESSION   DATAVD010000764 DATAVD010000000
VERSION     DATAVD010000764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 11389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11389
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_443527"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..187
                     /locus_tag="VHX39_14545"
     CDS             <1..187
                     /locus_tag="VHX39_14545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992387.1"
                     /translation="FGLLAPIVTGYLVEASGSFSSAFIAGGILALVGAVATLILSRGA
                     IGEVTVTTARRPAGAPG"
     gene            284..1108
                     /locus_tag="VHX39_14550"
     CDS             284..1108
                     /locus_tag="VHX39_14550"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3992388.1"
                     /translation="MRVSTMIRVDPDVKPHDRVLSRMADYARRIEAAGFPGIWVGDSL
                     GRGRPTLDPLIEMSVLAAVTERVELGISVLQLPLRNPIELAHRVQSVQALSGNRLRLG
                     VGSGSTRADFELLGYDYDHRFGTMKRSLETMRRAWRGEATNAGGVLTLWPECEGGPPI
                     LMGAWRSPRWITFAAQECAGWTPSGRFSSWDDLEYGMKVYREAGGTNAVLANTAIDLA
                     NRPQSAALAEVATSLVCPPDEARKRLKRLEQIGFDEVLLVSHSSVLEDIERARDFL"
     gene            complement(1110..2393)
                     /locus_tag="VHX39_14555"
     CDS             complement(1110..2393)
                     /locus_tag="VHX39_14555"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992389.1"
                     /translation="MLHYRRVWVCAFLFTLTAINYADRVALSVAATPVAQEFGLSKVE
                     VGYLLSSFLWAYVFCLIPVGLLVDRFGGKIVNACGIGLWSLATVCTGLAPSYLFVMCS
                     RIVMGAGESTCWPASNRIIREWFPATERAVANAIFGAGAAAGPAVGAVGISAIVGTWG
                     WRWGFIVAGSIGFVWLLLWWIFFDHPERVSWLRPTERDKILGERDGEFAAHVAEQPSS
                     SLWYLLSLRSTWGLFLTQGCEVYGGYMLLTWLPTYLHQAKGLSVMDSGMLTAIPFGAA
                     AVGGVALGRLSDLLLNPKTVSEGKRRIMIATMLAGASTLMIIPLINQLWLIIGLLAVM
                     RAMGMAGSALNFALVTDLVRNRSDIGKVTSTTVVGGNSFGLCAPIITGYVVQITGSFD
                     NAFYIAGFLPLIGAVATLTMTRQAILPARLAVAAV"
     gene            2824..4170
                     /locus_tag="VHX39_14560"
     CDS             2824..4170
                     /locus_tag="VHX39_14560"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEX3992390.1"
                     /translation="MPIVTVPGANHSTVKLSYDLDANAVLARYIAGVIKTGLAGGTID
                     AFDNKSGSPPSLPPGVTGEFVQSHSGSTMLPKGYDFVVDSAKSAQIFGNGDDNEAVLV
                     GKGNLQFFAMGGSGSVIGGGGNDMFESTSSDNGNWLIALGNGNDSIRAFGGGNDTIST
                     GSGHSILQLGSGSDYITTTGSDTVLAGSGSETINAIGAHDVVYGNASSLLFVAGGAAT
                     IFGGSGSDTVLGSATSKGADLFEGGSAGNNFLQAGNGPATLFGGGDGDQLYAGGGGPQ
                     QLHAAGGNETLFGGFGSGSDTFYGGSGADQITGGTGTNTFVAGTGTATITASPGSMNV
                     FDFMKTMGGGSETVTGLTDQSQVHIDLSGYGKNEVKYALAHQTTANGSVTVTLSDNTT
                     VTFQNIASLSGSNFTDSNSSGGGSGGKGGFGDKHGFGHDQWGDGDHNWDDHSHHGH"
     gene            complement(4280..5641)
                     /locus_tag="VHX39_14565"
     CDS             complement(4280..5641)
                     /locus_tag="VHX39_14565"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF019334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX3992391.1"
                     /translation="MERELGRGAMGVIYKADDPDIGRTVAIKLVRADLLEGEDRDRFL
                     ARFRHEARAAGRCMHPNIVALYDFAMHDGNPFLAMEYIDGVSLGIELKRIVRFAPAQA
                     VAIVAQVLDALGAAHALGIVHRDVKPANILLLPSGQVKVTDFGISRINTSDLTQDGTV
                     IGTPAYMSPEQCRGDDVDARSDLFSVGSVLYELLSGTRAFTGRNSTDVTQRLLNVEPR
                     DLTEFVPGVPMALAGALRRAMAKPREARYASAQVMADALRGALRSDVAASGEPASDQT
                     IVMVQRPTPTPATPPSAPTPTGVIVDDATLDTIERRLAQHVGPIARHLVRDAARRTNS
                     IEALCEAVAHNIGQATERERFIVESRAISLHRGGGTAIRSTVSRSAIASSAITGSSNF
                     SPAQIERVERALTRALGPIAKLLIKRALPNAATEQALWERLATHIDRTVDRETFLRQR
                     RGG"
     gene            complement(5690..6562)
                     /locus_tag="VHX39_14570"
     CDS             complement(5690..6562)
                     /locus_tag="VHX39_14570"
                     /inference="COORDINATES: protein motif:HMM:NF023273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3365 domain-containing protein"
                     /protein_id="HEX3992392.1"
                     /translation="MGLRAKFNLILLAAFVVGLALSGTLLYQIVNNNARREVSHEAAI
                     MITAASAIRNYTAKEIKPLLADQLKVRFLPHVVSSWAAQTNLREVSAHFPAYTYKEAA
                     LNPTNPADRATDWESDIIGEFQRNATLKEFETVRDTPAGPMLSVSRPIRITDPECLSC
                     HSVPSAAPATMIDLYGTANGFGWKMNDVIGAQIVSVPMRIALDRANQVFMVIFGGLAA
                     VFLITLLLLNLVLHVMIIRPIRQMSAIAGDVSLGRTDAPEFAEQGRDEIASLGQSFNR
                     MRRSLTNALQLLDT"
     gene            complement(6624..7550)
                     /locus_tag="VHX39_14575"
     CDS             complement(6624..7550)
                     /locus_tag="VHX39_14575"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HEX3992393.1"
                     /translation="MALIIGNATYSSLPPIPGCRKSANTVAAAMRALGFQVTERQDAS
                     TGGVDAGISEFASHLAGGASTGFVYICGYATDFNDRTFVLPTTARIDRPSDVLTQGTL
                     AKAMFGPMGRDPATLGVVVFDLVPKPDGPPKPGIDALAALPAPDGVGIIAGIEAAASD
                     NPTPLATTLVAGLSAPQVRTETLLAAVRSKFPANSVAIHMPARPGFLAGGPAPVPPPT
                     APPPVAAATPPPAPVAAVPSERMPDEALMTDTQRRQVQTALARLGYYGSQVDGVFGPE
                     TRAAIRRFQHEVGSETTGRITADEATRLVNSR"
     gene            7537..7908
                     /locus_tag="VHX39_14580"
     CDS             7537..7908
                     /locus_tag="VHX39_14580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992394.1"
                     /translation="MISATRGDSARAAPMGKSPAKKAITVRMSVIRGMICTFRASARV
                     AYATANGQQSANPEATMPAGILPGSGTLTEWRQQREVTVPWQTTAPTEAASNPAEVHQ
                     AVLWPAPALSRARRGSLPLSR"
     gene            7851..9074
                     /locus_tag="VHX39_14585"
     CDS             7851..9074
                     /locus_tag="VHX39_14585"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992395.1"
                     /translation="MAGASIESRASWVIAAVALTILSLSYGAPLVTVVALKPIAAEFG
                     TERSAPALAVSLTYIGSGMGGIMMGWIAGRIGMRPVVIFCGLMIALGLVLASYGGLYQ
                     LYASNLLLIGLLGAAGMFSPMMAYVTGWFDHRRGSAIALVSSGQYVAGAVWPLLLQSG
                     VDALGWRHTMRLYALLIAVTIPLLAAVFFRRPPELPAHPSSTIGASVFSPVAGIPPDL
                     VQAMLAGAIFCCCVTMSIPLAHIVAFCSDIGIGPESGAAMLSLQLAAGFVAQQLWGWV
                     ANRLGGLRTILCASASMAVAMTGFLLTQNEIGLFSVSGVFGLAFGGLIPGYILAIREI
                     FPAAEASWRIPLVLFPGALGMAAGGWMAGMIYDGWGYYAPAFAMGILFNLVNLALIGT
                     LVPRHRPPRSVLAIV"
     gene            9218..10546
                     /locus_tag="VHX39_14590"
     CDS             9218..10546
                     /locus_tag="VHX39_14590"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992396.1"
                     /translation="MPVVSATEAALENQRLGGLQMRVAALCTLVQVCDGYDLNAVAWA
                     VPPLIREWHLPPASFTVAFLWSSIGIMVGALSAGPIGDRFGRRPLLLISLTIFGIASL
                     FSAFAGSLLMLTVFRFFTGLGIGGGFAGAASLTGDYTPHRLRATVIMATFTGAPIGGF
                     LGGQIVALLLPHYGWPMIFLIGGAFPLVLVVLLAVWLPESPRFLAARENLAPRHAAVL
                     QRLDIVPASGHEVDVARGNPILMLFGPGYALQTTLMWIIYFCSLLNLFLFAYWMPTVL
                     NMIGMTPSQAVFASSLRDGGAILVVLYLGIAIDRIGPERTLALHYAVGAVFIATIALV
                     ALPYVALCVVSMLAGMTIIGSQTGLNGTCGKLYPARMRTSGLGWALGIGRLGAIVAPL
                     MGGYLLARGMAPTQIFLVACGFALIAALATALLAFRGTPVEVSTAEEAAS"
     gene            10705..>11389
                     /locus_tag="VHX39_14595"
     CDS             10705..>11389
                     /locus_tag="VHX39_14595"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992397.1"
                     /translation="MSENLALPIVGAPMATPVPTIAARMDRLPPSPYVRRFIVLLALG
                     AFFDVFDNGLIAFIAPGLYKAGIMVPTTAGFFDIHGYASLIAATFVGMFIGTQWLAPL
                     SDHFGRRTVFTYALVWYCIATFVMALQTSDVGLVIWRFLAGVGIGVEFVTIDTYLSEL
                     VPRERRGVAFASVSLIGTSAYPITAFLAWALVPTTVFGLDGWRWVAIIGASGAIVAWF
                     LRLALPESPR"
BASE COUNT         2022 a         3512 c         3599 g         2256 t
ORIGIN      
        1 gtttggcctg ttggcaccga tcgtcaccgg atatctcgtc gaagccagcg gcagtttcag
       61 ttccgcattc atcgccggcg gcattctggc gctggtcgga gccgtggcaa cactgatcct
      121 gtcacgcggc gcaatcggag aggtaactgt aacaaccgct cggcgacccg cgggcgcgcc
      181 gggctgaggg tggcgccagg agcagttccg tcgcaagctg gccgaggtcg ttcgcggcct
      241 gacggtcgcc gaccacaatg acagcaatgc ccggaggatg gccatgcgcg taagcaccat
      301 gattcgtgtc gatcccgatg taaaaccgca tgaccgcgta ttgagccgca tggccgatta
      361 cgcgcgccgc atcgaagccg ccgggttccc cggcatctgg gtcggcgatt cacttggccg
      421 tgggcggcca acgctggatc cgctgatcga aatgtcggtg ctcgccgccg tgaccgagcg
      481 cgtcgaactg ggcatttccg ttttgcagct gccattacgt aacccgatcg aactggcgca
      541 tcgcgtgcaa tcggttcagg ccttgtcggg caatcggctg cggcttgggg ttggcagcgg
      601 ctcgacccgc gcggatttcg agttgctcgg ctatgactat gaccatcggt ttggcacgat
      661 gaagcgctca ctggaaacca tgcgacgcgc ctggcgtggc gaggccacaa atgccggcgg
      721 tgtattaacg ctgtggccgg aatgtgaggg cggaccgccg atcctcatgg gagcctggcg
      781 cagcccgcgt tggatcacct tcgcagcgca ggaatgcgcg ggatggaccc cctccggccg
      841 tttcagcagt tgggacgatc ttgagtatgg catgaaggtt taccgcgagg ccggcggcac
      901 caacgctgtc cttgccaaca ccgcgatcga tctggcgaac cggccgcaat ccgctgccct
      961 cgcagaggtt gccacctcct tggtctgccc gccggacgag gcgcgcaagc ggttgaagcg
     1021 cctcgagcaa atcggttttg acgaggtcct gctggtgtcc cattccagcg tactcgaaga
     1081 tatcgagcga gcgcgcgact tcctctgatt cacaccgcgg cgactgcgag tctggccggc
     1141 aggatcgcct gccgcgtcat ggtcaatgtg gccaccgcgc cgatcagcgg caggaacccg
     1201 gcaatataga atgcgttgtc aaaactgccg gtgatctgca cgacgtaccc cgtgatgatc
     1261 ggcgcgcaca gcccgaagct gttgccgccg accacggtcg tgctggtgac tttgccgata
     1321 tcgctgcggt tgcgcaccaa atcggtcacc agtgcaaaat tcaatgcgct gcccgccatg
     1381 cccatcgcgc gcatcaccgc cagcaaacca atgatcagcc aaagttgatt gatcaacgga
     1441 atgatcatca acgtcgacgc tcccgccagc atcgtcgcga tcatgatgcg ccgcttgccc
     1501 tcgctgacgg tctttggatt gagcagcaga tcgctcaacc gtcccagagc gacgccgccg
     1561 acggccgcgg cgccgaatgg gatcgcggtc agcataccgg aatccatcac gctcaggcct
     1621 ttggcctgat gcaggtaggt cggcaaccag gtcagcagca tatagccgcc gtagacttcg
     1681 cagccctgcg tcaggaacag tccccacgtg ctgcgcaacg acaacaaata ccacaacgac
     1741 gatgacggtt gttccgcgac atgggcagcg aattcgccgt cccgttcacc caggatcttg
     1801 tcgcgttcgg taggacgcaa ccagctcacg cgctcggggt ggtcgaagaa aatccaccat
     1861 agcagcagcc aaacgaaacc aatcgagccg gcaacgataa acccccagcg ccaaccccag
     1921 gtaccgacga ttgccgagat tccgaccgcg ccgactgccg gaccggccgc cgctccggct
     1981 ccgaaaatcg cgttagcgac ggcgcgttcc gtcgctggaa accactcgcg gatgatacgg
     2041 ttcgacgctg gccagcaggt cgactcgccc gcgcccatga cgatccggct gcacatgacg
     2101 aacaggtagg aaggcgccag cccggtgcat acggtggcaa gcgaccacaa gccgatgccg
     2161 caggcgttga cgattttgcc gccgaaccgg tcaaccagca ggccgaccgg aatgaggcag
     2221 aacacgtagg cccacaggaa cgaggacagc agatagccaa cctcgacctt gctcaacccg
     2281 aactcttgcg cgaccggcgt cgccgccacc gaaagtgcca cgcgatccgc gtaatttatc
     2341 gcagtcagcg tgaacaggaa cgcgcaaacc catacgcgac gatagtgcag catcctttcc
     2401 ccccggtcgg tcggcaatca tttccagcaa gcctgcgcca gcggccgtag gcggtcaatt
     2461 cgctcccctt gtcgctcgcc cggccgaccg gttaaccggt atccaggccg ggctcattcc
     2521 gatatcagat caaatcgcag tgcagccccg agcccggcca actgacctca atcgaggact
     2581 tccgcacccg gcaaaagaac gaaatacata cgaattcttt cattctcatt tcacagaatt
     2641 cctctgttga ctacccaaat cccacgtggc tagactttgt cccgtgacgc gaattaacgg
     2701 aggtgtcatg agatagggtg cgcggccgtg ttattcgggc gctgaacctt cgaaacagcc
     2761 atcagacctt ccgcgcggtg gggaccgctc ggtagatttc attcttcagg gagagctcag
     2821 ccgatgccaa tcgttacggt accaggagcg aatcattcga cagtcaagtt gtcgtatgat
     2881 ctcgatgcaa acgcagtgct ggcgcgttat atcgccggcg tgatcaagac aggtctcgcc
     2941 ggaggcacga tcgatgcctt cgacaacaaa tcaggcagcc cgccatctct gccgccgggc
     3001 gtgaccggcg agttcgtgca gagccactca ggctccacaa tgttgcccaa aggctatgac
     3061 ttcgtcgtcg actccgcgaa atccgcacag atcttcggca acggtgatga caacgaggcc
     3121 gtgctggtcg gcaagggcaa cctgcagttc ttcgcaatgg gcggctcggg cagcgtcatc
     3181 ggcggcggcg gcaacgatat gttcgagagt acgtcgtcgg ataacggcaa ctggctgatt
     3241 gcgttgggca acggcaacga ttcgatccgc gcattcggcg gcggcaacga caccatcagc
     3301 acaggctccg gccatagcat cctgcaactt ggcagcggca gcgactacat caccaccacc
     3361 ggatcggaca ctgtcctggc aggcagcggc agcgagacca ttaacgcgat cggtgcccac
     3421 gacgtggtgt acggcaacgc cagcagtttg ctcttcgtgg ctggcggcgc ggcgaccatc
     3481 ttcggcggtt cgggcagtga caccgtgttg gggagtgcca caagcaaggg tgcagatctg
     3541 ttcgaaggcg gctcggcagg caacaacttc ctgcaagccg gcaacggccc ggcgacgttg
     3601 ttcggcggcg gcgacggtga tcagctttat gccggcggcg gcgggccgca gcagctgcat
     3661 gctgcgggcg gtaacgagac tctgttcggt ggtttcggtt ccggcagcga cacgttctat
     3721 ggcggctccg gcgccgacca gatcactggt gggacgggga cgaacacctt cgttgccggc
     3781 acgggaactg ccaccatcac agcgagccca gggtcgatga atgtgttcga cttcatgaag
     3841 accatgggag gcggatcgga gacagtgact ggcctgaccg atcaatccca ggtgcacatc
     3901 gatctgtccg gctatggcaa gaacgaggtc aaatacgctc tggcccacca gacaacggcg
     3961 aatggatccg ttaccgtaac gctgtctgac aacacgacgg tgaccttcca gaacattgcc
     4021 agcctgtcgg gcagcaattt caccgactcc aattcctccg gtggcggcag cgggggcaaa
     4081 ggcgggtttg gcgacaagca cgggtttggc cacgaccagt ggggcgatgg cgaccacaat
     4141 tgggacgacc attcgcacca cggacactga tgcattccga tgcggtgcac cttgatggtg
     4201 tgccgcatcg gaccgcttgc gagccgctgg tcggtcaacc gctggtcgct taaccgctgg
     4261 tcggtcaacc gctggtcgct taaccccccc ggcgctgccg caaaaatgtc tcgcggtcga
     4321 cggtgcgatc gatatgggtt gccagtcgct cccacaacgc ttgctcggtt gccgcattgg
     4381 gcagtgcgcg cttgatcaac agttttgcga tcgggccgag ggctcgggtc agcgcacgtt
     4441 ccacgcgctc gatctgagcg ggtgaaaagt tgctgcttcc ggtgatcgca ctgctggcaa
     4501 tggccgagcg cgacaccgtt gagcggattg cggtaccacc gccgcgatgc agcgaaatgg
     4561 ccctgctctc gacaatgaac cgctcgcgtt cggttgcctg cccaatgttg tgggcgacgg
     4621 cttcgcagag cgcctcgatc gaattggtcc gccgtgcggc gtcgcgtacc aaatgccgtg
     4681 cgatcggtcc cacgtgctgc gcgagacggc gctcaattgt atccaacgtt gcgtcgtcga
     4741 cgataacgcc agtcggagtt ggggcagacg gcggtgtagc aggcgtcggc gtgggccgct
     4801 gcaccatcac tatcgtctga tcactcgccg gctccccgct ggctgcgaca tcactgcgta
     4861 gcgcgccccg cagtgcgtct gccatcacct gagccgacgc gtaccgcgcc tctctgggtt
     4921 ttgccatcgc ccgacgcagc gcgccggcca aggccattgg cacgcccggc acaaactccg
     4981 tcagatcgcg cggttccacg ttgagcagcc gctgcgtgac atcggtactg ttacgtccgg
     5041 tgaaagcgcg tgttccgctc agcagttcgt agagcaccga gcctacggaa aacagatcgc
     5101 ttctggcatc gacatcgtcg ccacggcatt gctcgggcga catataagca ggcgtgccga
     5161 tgaccgtgcc atcctgcgtc aggtccgacg tattgattcg ggaaatgcca aaatccgtca
     5221 ccttcacctg accgctcggc agcaacagga tgttcgccgg tttcacatct cggtgaacga
     5281 tgccgagagc gtgcgccgca cccagtgcat ccagcacctg agcgacaatt gccaccgcct
     5341 gggccggagc gaaccgcaca attcgtttca gttcgatccc cagcgacaca ccgtcgatgt
     5401 attccatcgc caggaacgga ttgccgtcgt gcatcgcgaa atcgtacagc gcaacgatgt
     5461 tgggatgcat gcaacgcccg gcggctcggg cctcatgacg gaaccgggcg agaaaccgat
     5521 cgcggtcttc gccttccagc aggtcggccc gcaccagttt gattgcaacc gttctgccga
     5581 tatccgggtc atcggcttta tagataacgc ccatggcgcc gcggccgagt tcccgctcca
     5641 cgcgatagcg gccgatggat gacggcagtg gcgtgttggc ggctatgggt caggtgtcca
     5701 gtaattgcaa ggcgttggtc aggctgcggc gcatgcggtt aaacgactgg ccgagcgatg
     5761 cgatctcatc gcggccttgc tcggcgaatt cgggcgcgtc ggtcctgccc aggctgacgt
     5821 cgccggcgat cgccgacatt tgccggatcg gccgtatgat catgacgtgc agcaccaggt
     5881 tcaacagcag caaggtgatc aggaacaccg ccgcaaggcc gccaaaaatg accatgaaaa
     5941 cctggttcgc ccgatccagc gcgatccgca taggaaccga aacgatctgg gcaccgatga
     6001 cgtcattcat cttccagccg aagccgttgg cggtgccata aagatcgatc atcgtggctg
     6061 gcgcggctga ggggacggag tggcaggata agcattccgg atcggtgatg cggatcggcc
     6121 gcgacaccga cagcatcggt ccggccgggg tgtcgcgcac cgtttcgaac tccttgagcg
     6181 tcgcgtttcg ctggaactcg ccgatgatgt cggattccca gtcggtcgcc cggtcggccg
     6241 ggttggtcgg attgagtgcg gcctccttat atgtgtaggc ggggaaatgc gccgagacct
     6301 cacgcagatt ggtttgcgca gcccaggacg agaccacgtg aggcaggaag cgtaccttca
     6361 actggtcggc cagaagcggc ttgatctcct tggccgtgta gttgcggatg gcactcgcgg
     6421 cggtgatcat gatggcggcc tcatgcgaca cttcgcggcg ggcgttgtta ttgacgattt
     6481 ggtacaacag cgtgccggag agtgcgagac caacgacgaa agcagccaaa agtatgaggt
     6541 tgaatttcgc tcgcaatccc attggtcatc ctttcgcggg gtgcccccgt cgttacgtct
     6601 gcggctggca gcacacttcg gcatcagcgg ctgttgacca gccttgtggc ctcatccgcc
     6661 gtgatgcgtc cggtcgtttc gctgccaact tcatgctgga accgccggat cgcggcgcgg
     6721 gtctcggggc cgaagacacc gtccacctgg ctgccgtaat agccgagacg ggccagtgcc
     6781 gtttgtacct gccgcctctg ggtgtcggtc atcagggctt cgtccggcat tctctcggag
     6841 ggcactgccg caacgggcgc aggcggtgga gtagcggcgg ccacgggtgg cggcgcggtc
     6901 ggtggcggca cgggtgccgg accgccggcg agaaagccgg gacgcgcggg catgtggatc
     6961 gccacgctgt tggccgggaa tttgctccgc acggcagcca acagcgtttc ggtgcgtact
     7021 tgcggcgcgg atagcccggc gacgagtgtc gtggccaatg gcgtcggatt gtcgctcgcg
     7081 gctgcttcga tgcctgcgat gatgccgacc ccatccggcg cggggagggc ggccaacgcg
     7141 tcgatgccag gcttcggcgg tccatccggt ttcggcacca gatcgaagac cacgacgccc
     7201 aaggttgccg ggtcgcggcc cattggcccg aacatcgcct tcgcaagtgt gccctgggtc
     7261 agcacgtcgg acggccggtc gatcctggcc gtggtaggca gcacaaacgt ccgatcattg
     7321 aagtccgtgg cgtagccgca gatataaacg aacccggtgc tggcgccgcc ggcgagatgg
     7381 ctggcgaact cgctgatccc ggcgtcaacg ccgccggttg aggcatcctg acgctcggtg
     7441 acctgaaaac ccagagcgcg catcgcggcg gcgaccgtat tggcggattt tcggcagccc
     7501 gggatgggcg gtagcgaact gtaggtggca ttgccgatga tcagcgccac gcgcggcgat
     7561 tctgcccgcg cagcaccgat gggcaaaagc ccggcgaaaa aggcgatcac tgtgaggatg
     7621 agtgttattc gcggcatgat ttgtactttt cgggcatctg ctcgtgtagc gtatgcgacg
     7681 gccaatggcc agcaatcggc caaccctgaa gcaaccatgc cggcgggcat cttgccggga
     7741 tcgggaaccc tgacagaatg gcggcaacaa cgggaggtga cggtgccatg gcaaaccacg
     7801 gccccaaccg aggccgcctc caatccggcg gaggtgcatc aggcggtgct gtggccggcg
     7861 ccagcattga gtcgcgcgcg tcgtgggtca ttgccgctgt cgcgctgacg atcctgagcc
     7921 tgtcatacgg tgcgccgctg gttaccgtgg ttgccctgaa gccgatcgct gccgagttcg
     7981 gcaccgagcg gtcggcgccg gcgctcgcgg tgtcgctgac ttatatcggc tccggaatgg
     8041 gcggcatcat gatggggtgg atcgccggcc ggatcggcat gcgtcccgtc gtcatctttt
     8101 gtggcttgat gatcgctctg ggcctggtgc tggcgtccta tggcgggttg tatcagttgt
     8161 acgccagcaa tttgctgttg atcggattgc tcggtgcggc ggggatgttt tcgccgatga
     8221 tggcctacgt cacgggttgg ttcgatcacc gccgtggctc cgcgatcgcg ttggtttcct
     8281 ccggccagta cgtggcgggc gcagtgtggc cgttgctgtt gcagagcggc gtcgatgcgc
     8341 ttggttggcg acacacgatg aggctttacg cgctgctcat cgcggtgacg attccgctgc
     8401 tggcagcagt gttcttccgc cgtccaccgg aactgccggc gcatccctcc agcacaattg
     8461 gcgcatcggt gttcagcccg gttgccggga tccctcctga tctggtccag gcgatgctgg
     8521 ccggcgcgat tttttgctgc tgcgtaacca tgtcaattcc gctggcacac atcgttgcgt
     8581 tctgtagcga catcgggatc ggccccgaat caggtgccgc catgctgtcg ctgcaactcg
     8641 ccgcagggtt cgtcgcccaa caattgtggg gctgggtggc caatcgcctc ggaggactgc
     8701 gcacgatcct gtgcgcatcc gccagcatgg cagtggcgat gaccgggttc ctgttgacgc
     8761 agaacgaaat cggactgttc tccgtttccg gcgtattcgg cctcgcgttc ggcggcctta
     8821 ttccaggtta tattctggcc ataagagaaa tcttcccggc cgccgaggcg tcgtggcgca
     8881 ttccgctcgt cctgttcccc ggcgctttgg gcatggccgc gggcggttgg atggcgggca
     8941 tgatttatga cgggtggggc tactacgcgc cggccttcgc gatggggatt ttgttcaatt
     9001 tggtgaacct ggctttgatc ggcactttgg tgccgcgcca ccggcccccg cggtcggtgt
     9061 tggcaatagt ctgacgcggg cattggtttt ttggcagcgg cggccgacgc gcgaattccg
     9121 ccgcgacgtc cagcagacgg cgcccgcgta ggcgcttgcc tgacgcctcg gaccatgcaa
     9181 ccgtgaccct taagaatgag ccgttgggag gctaaatatg ccggtcgtgt ctgcaaccga
     9241 ggcagcactc gaaaatcagc gactgggcgg cttgcaaatg cgtgtcgccg cattgtgcac
     9301 gctggtccag gtctgcgacg gctacgacct caatgcggtc gcctgggcgg tgccgccatt
     9361 gatccgggag tggcacttgc cgccagcaag tttcaccgtg gcgtttctgt ggtcgagcat
     9421 cggtatcatg gtaggcgcgc tgtccgctgg cccgatcggc gatcgtttcg gccggcggcc
     9481 gctgttgctg atcagcctga cgatctttgg cattgcctcg ctgtttagcg cctttgctgg
     9541 ctcgctgttg atgctgacgg tgtttcggtt cttcaccggt cttggcatcg gcggcggctt
     9601 cgcaggagca gcgtcgttaa ccggagacta cacgccgcat cgcctgcgag cgacagtcat
     9661 tatggcgacg ttcaccggcg cgccgatcgg tggtttcctc ggcggtcaga tcgtagcgtt
     9721 actgttgccg cattatggct ggccaatgat ctttctgatc ggcggcgcgt ttccgctcgt
     9781 actggtggtt ttattggcgg tttggctacc ggaatcgcca cgctttctgg cagcccgaga
     9841 aaatctggcg ccgcgccatg ccgccgtgct gcaacgtctc gacatcgttc cggcaagcgg
     9901 ccacgaggtg gatgtggcgc gcggtaaccc gatcctgatg ctgtttggcc caggttacgc
     9961 gctgcagacg actttgatgt ggatcattta tttctgcagc cttttgaacc tgtttctgtt
    10021 cgcctattgg atgccgacgg tgctgaacat gatcggcatg accccgtccc aggcggtgtt
    10081 cgcatcgagc ctcagggacg gcggcgccat tctcgtcgtg ctgtatctcg gcatcgcaat
    10141 cgaccggatc ggccctgaac gtacgctggc actgcactat gccgttggcg cggtgttcat
    10201 tgccacgatc gcacttgtgg ccttgcctta tgtggcgctt tgcgtggtca gcatgttggc
    10261 cggaatgacc atcatcggca gccagaccgg gctcaatggg acctgcggca agctttatcc
    10321 ggcccgcatg cgcaccagcg gtctcggctg ggcgcttggc atcggacgcc ttggcgcgat
    10381 cgtcgcaccg ctcatgggcg gctatttgct cgcccgtggc atggcaccca cacagatttt
    10441 cctggtcgcc tgtgggtttg cgctgatcgc ggcgctggcc accgcgctgt tggcgtttcg
    10501 tggcactccg gtcgaggttt ccaccgccga agaggctgca tcctgacagg acaccacttt
    10561 tcaactcggt agcacaacga cacatcaccg gttccgcatt cgccaacgtg gaccaggatc
    10621 aaaacgagtt cgccaagaag accgcacgcc gacccaaaga accataagat tccggcggag
    10681 cggtgcagca agggagaaaa cgccgtgtcc gagaacctcg ccttacccat tgtcggtgcg
    10741 ccgatggcga caccggtccc gaccatcgct gcccgcatgg atcggctgcc gccgtccccc
    10801 tacgtgcgtc gtttcatcgt gctgttggcg cttggcgcgt tcttcgacgt gttcgacaat
    10861 ggcctgatcg cgttcatcgc accgggactt tacaaagccg gcatcatggt gccgacgacc
    10921 gccggtttct tcgatatcca cggttatgcc agcctgatcg ctgcaacctt tgtcggcatg
    10981 ttcatcggca cccaatggct ggcgccattg tcggatcatt tcggacgccg gacggtgttc
    11041 acctatgcgc tggtttggta ctgcattgca acattcgtca tggcactgca aaccagcgat
    11101 gttggcctgg tcatctggcg gttcctcgcc ggtgtcggga tcggcgtcga gttcgtgacg
    11161 atcgatacct atttgtccga gttggtgcca agagaacggc gcggcgtggc atttgcgtcg
    11221 gtgtcgctga tcggcacctc agcctatccc atcacggcat ttcttgcctg ggctttggtc
    11281 ccgaccaccg tgttcggtct cgatggctgg cgctgggtgg cgatcatcgg tgcaagtggc
    11341 gcgatcgttg cgtggttcct gcgtctggca cttccggagt caccgcgct
//
LOCUS       DATAVD010000765         8488 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_819354, whole genome shotgun sequence.
ACCESSION   DATAVD010000765 DATAVD010000000
VERSION     DATAVD010000765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8488
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_819354"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..859)
                     /locus_tag="VHX39_14600"
     CDS             complement(<1..859)
                     /locus_tag="VHX39_14600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HEX3992398.1"
                     /translation="MADHAKIDDYRGLKGAQKAAIVMLALGEEQCGRLFAMMHEDEIR
                     DISAAMAQLGAIRSEVVERLCTDFVESLGSSGSLVGSFESTEILLNKSLPRDRVAQIM
                     EEIRGPAGRTMWDKLGNVNEDVLANYLKNEYPQTVAVVLSKIRADHAARVLTLLPDPF
                     AMEVVMRMLRMETVQKEVLDGVERTLRSEFMSNLARSSRRDSHELMAEIFNNLDRAAE
                     TRFVNGLEERNRESAERIKSLMFTFDDLQRLGSQAVQTLLRSVEKDRLPIALKGASEK
                     IKDLFLKNMG"
     gene            complement(852..2543)
                     /gene="fliF"
                     /locus_tag="VHX39_14605"
     CDS             complement(852..2543)
                     /gene="fliF"
                     /locus_tag="VHX39_14605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007282674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009431 - bacterial-type flagellum basal
                     body, MS ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body MS-ring/collar protein
                     FliF"
                     /protein_id="HEX3992399.1"
                     /translation="MKALLDGLKALGPARLAAMGAVALGLLGLLAFMVLRAGSGDQMA
                     LLYGDLDPRDASQMVDKLNQQHIPYRVGAGGGEILVPADQVPQARMLLAKEGLPSGGS
                     IGYELFDRGDGYLFSAFQQKISETRAMEGELARTILAIHGIRGARVMLVLPHREPFAR
                     EQQEAQASVMLTMVGAQRLDKEGIQAILNLVAAAVPGLRTQNIAVVDSRGDLLARAGQ
                     PTTQLTEAATAEEVRRTTEMRLARAVEDMLEKTLGPGRVRAEASVRMDFDKLNETKEL
                     FDPDQQVTRSTQTVNSTSKTTEANQAVTAQNNLPNADAGAPGNGSQEGRQEETTNYEI
                     GKTVRTLIHEQPRIDRISLAVMVDGTEQPGADGKPAWQPRSAEDLDRITNLVKSAIGF
                     DEKRGDQVDVVSMRFVDDNTLVADNGGLFGLHLEKPDFMHLAQTALFGVIGLLALLLV
                     LRPMVARLTALTPGGFALADGTGGGMMSGGIPSVSAPNGMQALPAPGPLANALSGLTA
                     GALAAAQLEDESMISLGQIEGQMRASSLRKLTDIVGKHPDETLTIMRGWMAQEDG"
     gene            2883..3443
                     /locus_tag="VHX39_14610"
     CDS             2883..3443
                     /locus_tag="VHX39_14610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992400.1"
                     /translation="MFDLDRLIADCKSVTSSGTVEKSIRELMREAVADPSQVIRALGE
                     PTRAGIDLLYRSNELTVINVVWGPHMTAMPHNHHMWAVIGMYGGREDNIFWRTLPDDA
                     RWPIEAAGASALMPGDVCPLGKEIIHSVTNPLGKLSSAIHIYGGDFVVQSREQWEEDT
                     LRKRPFDQESARRRFEEANHRMAAVE"
     gene            3566..4381
                     /locus_tag="VHX39_14615"
     CDS             3566..4381
                     /locus_tag="VHX39_14615"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3992401.1"
                     /translation="MSAVATCGLGPLIDTHAHIYPRNTPLIEGATHQPSRDVTADEFL
                     RTLDSHGVLFGVHAAASFMGPYNDYTLAALARHRRLRGTAIVDPSVSLPELQSMAAAG
                     IVGIRFSLRDYKSTPDLGTPEYRRLLRRVADLDWHVHVYAEGERIAALTTQLLAAEVN
                     IVIDHYGNPVPDLGENSPGFQAALRAIGSGRGWIKLSAPYRSPGCDHAALAARLMDEG
                     GPEHLLWASDWPFVGHENKVTYRQMVESFEQVVPDPVVREQIGRTAARLYKFA"
     gene            4418..4783
                     /locus_tag="VHX39_14620"
     CDS             4418..4783
                     /locus_tag="VHX39_14620"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3992402.1"
                     /translation="MTYTAINLAGKFAKFDEQWAPKVIAEMNDYQFKIVKLEGDFIWH
                     DHKDTDETFIVIDGTLRIDFRDGSVVVSAGEMFVVPKGVEHKPYAEHEVKLMLIEPRG
                     VRNTGDTGGERTAESDIWI"
     gene            4853..5560
                     /locus_tag="VHX39_14625"
     CDS             4853..5560
                     /locus_tag="VHX39_14625"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX3992403.1"
                     /translation="MLALQFVIETLIVAAAAALQAGTGMGMALLAAPLLLLVDRALVP
                     GPMLCATMVLSIAVVWRERSAIDRSLLSVAFLGLAVGCVIGAVTLAVLIGVNLAKLFG
                     AIILIIVLLSVLGLDIRATTQSLLLGGVASGILGTMFGVHGPPIAIVLQHEPPERLRS
                     TLCAFFAVGCGISLVLLAVIGRFGFRGMQLGLVLLPGVAIGFACGPFLGRMLNRQRAR
                     IAVLTISTLSAVALLLR"
     gene            complement(5660..6306)
                     /locus_tag="VHX39_14630"
                     /pseudo
     CDS             complement(5660..6306)
                     /locus_tag="VHX39_14630"
                     /inference="COORDINATES: protein motif:HMM:NF013353.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0036361 - racemase activity, acting on
                     amino acids and derivatives [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
     gene            complement(6317..7729)
                     /locus_tag="VHX39_14635"
     CDS             complement(6317..7729)
                     /locus_tag="VHX39_14635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019088547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018580 - nitronate monooxygenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEX3992404.1"
                     /translation="MQAINAIRMGGFDVLPLVEGGKGVAVSNGTTAGHWALGGGIGTI
                     SAVNADSYDEDGKPIPQEYHARTRRERHEELIAYAIKGALAQARKAFDITGGKGRIHA
                     NILWEMGGAERVITEVLEQAKGLINGITCGAGMPYRLSDIAARFNVHYYPIISSARAF
                     SALWKRAYHKTASLLGGVVYEDPWLAGGHNGLSNSENPEKPEDPYPRVVTLRKTMNEF
                     GLSETPIIMAGGVWWLEEWAHWLDNKEIGPIAFQFGTRPLLTKESPIPEPWKQKLLTL
                     QEGDVYLNRFSPTGFYSSAVDNAFLHELKGRTERQVAYTTEPVGEHAAEYGVGPRKRI
                     VYLTQPDLGRVRGWESQGFIEALRTPDSTLIFVTPEKSQEIVADQASCMGCLSTCRFS
                     NWSQHEPDFSTNKRADPRSFCIQKTLQAVAHAGDDAEALENNLVFSGHNAFRFAKDPF
                     YSNGFIPTVRQLVERILTGR"
     gene            8256..>8488
                     /locus_tag="VHX39_14640"
     CDS             8256..>8488
                     /locus_tag="VHX39_14640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051983 - regulation of chromosome
                     segregation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HEX3992405.1"
                     /translation="MRKNTSISLGEHFIQFVEAQVGQGRYGSASDVVRAGLRLLEEQE
                     AKLEALRSALIEGEQSGSSTPFDFEAFIARKRGA"
BASE COUNT         1471 a         2531 c         2747 g         1739 t
ORIGIN      
        1 cgcccatatt tttcaggaac aggtctttga tcttctcgga cgcgcctttc aacgcgatcg
       61 gcagccggtc cttttcgacc gaacggagta atgtctggac cgcctgcgac cccagccgtt
      121 gcagatcgtc aaaggtgaac atcaacgatt tgatgcgttc cgccgactcg cggttgcgtt
      181 cttccaggcc attgacgaat cgtgtctcgg cggcgcggtc caggttgttg aagatttccg
      241 ccatcagctc atgcgaatcg cgccgtgagc tgcgggccag gttcgacatg aactccgagc
      301 gtaacgttcg ttcgacgccg tccagcactt ccttctgcac ggtctccatg cgcagcatgc
      361 gcataaccac ttccatggcg aacgggtcgg gcagcagcgt cagcacgcgg gcggcgtgat
      421 cggcacggat tttcgacagc acgacggcga cggtttgcgg gtattcgttc ttcagataat
      481 tcgccagcac gtcctcattc acgttgccaa gcttgtccca catggtgcgg ccagcgggac
      541 cgcggatttc ctccatgatc tgggcgacgc ggtcgcgcgg cagcgacttg ttcaacagaa
      601 tctcggtgct ttcgaaacta ccgaccaggc tgccggagga cccgagactt tcaacgaaat
      661 ccgtgcacag acgttcgacc acctccgagc ggatggcgcc gagttgtgcc atggccgcgg
      721 aaatatcccg gatttcgtcc tcgtgcatca tcgcgaacag gcggccgcac tgttcctcgc
      781 ccagtgcgag catgacgatc gcggcttttt gtgccccctt gaggccgcga taatcgtcga
      841 ttttcgcgtg atcagccatc ttcctgcgcc atccatcccc gcatgatggt caaggtttcg
      901 tcgggatgct tgccgacgat gtcggtcaat ttgcgcaatg aggacgcgcg catctggccc
      961 tcgatctgac ccaggctgat catcgattcg tcttccaact gcgcagcggc caaggcaccc
     1021 gccgtcagac ccgacagcgc gtttgccaac ggacccggag ccggcagcgc ctgcatcccg
     1081 ttcggcgcgg agactgatgg aataccgccg gacatcatcc cgccgccggt cccgtcagcc
     1141 agcgcaaaac cgcctggcgt cagcgcggtc aatcgcgcga ccatcgggcg cagcaccagc
     1201 agcaaggcca gtaatccgat gaccccgaac agtgccgttt gtgccaaatg catgaaatcc
     1261 ggcttttcga gatgcagccc gaacaggccg ccattgtccg ccaccaaggt gttgtcatcg
     1321 acaaagcgca tactgaccac atcgacctga tcgccgcgct tttcgtcgaa cccgatggcg
     1381 gacttcacca gattggtgat gcggtccaga tcctcggccg agcgtggctg ccaggcgggc
     1441 ttgccgtcgg cgcccggttg ctcggttccg tcaaccatga ctgcgagact gatccggtcg
     1501 atgcgcggtt gctcgtggat cagggtgcgg accgttttgc cgatctcata gttggtcgtt
     1561 tcctcctgcc ggccttcctg cgaaccgttg cccggcgcgc cggcatcggc gttcggcaga
     1621 ttgttttgcg cagtgacagc ctggttcgcc tcggtcgtct tcgaggtcga gttcaccgtc
     1681 tgcgtgctgc gcgttacctg ctgatcggga tcgaacagct ccttggtttc gttgagcttg
     1741 tcgaaatcca tgcgcaccga ggcctcggcg cggacgcggc cgggaccgag ggtcttttcc
     1801 agcatgtcct cgactgcgcg ggcgaggcgc atttccgtgg tgcgcctgac ttcttccgcg
     1861 gtcgccgcct cggtgagttg ggtggtcggc tgaccggcgc gggccagcag atcgccgcgc
     1921 gagtcgacaa ccgcgatgtt ttgcgtgcgc aatccgggca ccgcggcggc gacgaggttg
     1981 aggatggcct ggataccctc cttatccagc ctttgcgccc ctaccatcgt cagcatcacg
     2041 ctcgcctggg cttcctgctg ttcgcgcgcg aagggttccc ggtgtggcag gaccaacatg
     2101 acgcgcgcgc cgcggatgcc gtggatcgcc aggatggtgc gggcaagctc gccctccatc
     2161 gcccgcgttt cgctgatctt ttgctggaag gcggagaaca ggtaaccgtc gccgcgatcg
     2221 aacagttcgt agccgatcga gccgcctgag ggcaggccct ctttggccaa caacatcctg
     2281 gcctgcggca cctggtcagc gggcaccagg atctcgccgc cacccgcacc gacgcggtac
     2341 ggtatatgct gctgattgag tttatcgacc atctggctgg cgtcgcgcgg gtcgagatcg
     2401 ccatacagca gagccatctg gtcaccggag ccggcgcgca ggaccataaa cgccagcaac
     2461 cccaacaatc cgagcgccac cgcccccatt gcagcaagtc gcgccgggcc aagcgccttg
     2521 aggccgtcga gcaatgcttt catggctggt tcacgccatt aactgtcgcc ggcgaggcgt
     2581 caggttgccc tgagtgcttc gccggaaccc aacccggagc gggagcaggg catggtgcct
     2641 cccggcctct gggcggccca ggatgctctg cgatcgggta ctggttgaga tcgccggcat
     2701 tcggtggcgc ccctgtgtcc atcgctggtg ctgttttggc tgtcagacaa agtggcgccg
     2761 aaaggttagg tttcggttaa caggggcggc agaatctgcc gggtaggtta gcgattcatt
     2821 ttgccagatc acccgagtgt ggataaattc catcccccag ttcgccgcca gggagatgaa
     2881 tcatgttcga cctcgatcgc ctcatcgctg attgcaaatc tgtcacaagc tcgggaaccg
     2941 tcgagaagtc gatccgcgag ttgatgcggg aggcggttgc cgacccgtcg caggtcattc
     3001 gcgctcttgg cgaaccgacc agggcgggga tcgatctgct ctaccgctcg aacgagctta
     3061 ccgtcatcaa cgtggtgtgg ggcccgcata tgactgccat gccgcacaac caccatatgt
     3121 gggcagtgat cgggatgtat ggtgggcggg aggacaacat tttctggcgc acgctgccgg
     3181 atgatgcacg ctggccgatc gaggcggccg gcgcttcggc gctgatgcct ggcgacgtgt
     3241 gtccacttgg caaggagatc atccactcgg tgaccaatcc tctgggcaag ctgtccagcg
     3301 caatccatat ctacggcggc gatttcgtcg tccagagccg agaacagtgg gaagaagaca
     3361 cgttgcgcaa acgtccgttc gaccaggaga gcgcgcggcg ccggttcgag gaagccaatc
     3421 accggatggc ggctgtcgag tagttccgga cctgcggttg cctcggagcg ccgtggcttg
     3481 acgccggcat aggttcacgc actggtatgc tcatcggcgc ctcgatctgg ggcccggtgg
     3541 ggatgccagg agaagcgata ccggcatgag cgcggttgca acatgtggcc tcgggccgct
     3601 gatcgatacc cacgcgcata tttatccgcg caacacgccg ttgattgagg gtgcgacgca
     3661 ccagccctca cgcgatgtga ccgccgatga atttctgcgg acgctcgact cgcacggcgt
     3721 gctgttcggt gtgcacgcag cggcgagctt tatggggccg tataacgatt acacgctggc
     3781 ggcgctggcc cgccatcggc ggctgcgcgg cactgcgatc gtcgatccgt cggtcagttt
     3841 gcccgagttg caatcgatgg cagcggccgg gatcgtgggc atccggtttt cgttgcggga
     3901 ctataagagt acgcccgatc tgggcacgcc cgaatatcgg cgattgctgc gccgcgtcgc
     3961 cgatctggac tggcatgtgc acgtatacgc cgagggcgaa agaatcgctg cgctgaccac
     4021 gcaattgctg gcggccgaag tcaacatcgt gatcgatcat tacggcaacc cggtgccgga
     4081 tttgggtgag aattcgccgg gatttcaggc ggcgttacgg gccatcggtt ccgggcgggg
     4141 ttggatcaag ctttccgcac cgtaccgttc cccgggctgc gatcatgccg cactggcggc
     4201 tcggctgatg gatgagggtg ggccggaaca cttgctgtgg gcgagcgact ggccgttcgt
     4261 cgggcatgag aacaaggtta cctaccggca aatggtcgag agtttcgaac aggtggtacc
     4321 ggatccggtg gtgcgggagc aaatcggccg caccgcggcg cggctttata agtttgcgtg
     4381 agttatgccg atgaccggca atggtgaagg agttggcatg acctatacgg cgataaacct
     4441 tgccggcaag tttgcaaaat ttgacgaaca atgggcgccg aaagtcattg ccgaaatgaa
     4501 cgactaccag ttcaagatcg tcaaactgga gggcgatttc atttggcatg atcacaagga
     4561 caccgacgag acgttcatcg tgatcgacgg cacgctgcgt atcgattttc gcgatggttc
     4621 ggttgtcgtt tcggctggcg aaatgttcgt tgtgcccaaa ggcgtcgaac acaagccgta
     4681 cgccgaacat gaggtgaagc tgatgctcat cgagccgcgc ggggtgcgta ataccggcga
     4741 tacaggaggc gagcggacgg cggaaagcga catttggatc tgatgatgcc tgccgtttcc
     4801 gcataaccct ggtcacttca gcaacaatgt ccgggcttat ccgcaaaggg ggatgctcgc
     4861 cctgcagttt gtcattgaga cattgatcgt ggccgcggcg gcggcgttgc aggccggcac
     4921 cgggatgggc atggcactac ttgctgctcc gttgttgctg ctggtcgatc gcgccctggt
     4981 gccgggcccg atgctgtgcg cgaccatggt gctgtcgatt gccgtggttt ggcgcgaacg
     5041 ctcggcaatc gaccgtagcc ttttgagcgt cgctttcctg ggccttgccg tcggctgtgt
     5101 cattggcgct gtcacgcttg cagtgctgat cggagtgaac ctcgccaaat tgtttggcgc
     5161 gatcattctg atcatcgttc tgctgagtgt gcttggcctg gatatccgcg ccacgacaca
     5221 gtcgctgctg ctcggcggcg tggcatccgg cattctcggt actatgttcg gggtacatgg
     5281 cccacccatc gccatcgttt tgcaacatga gccgccggaa cgtttgcgct ccacactatg
     5341 cgcgttcttt gccgtcggct gtgggatctc gttggtgctg cttgccgtga tcggcaggtt
     5401 tgggtttcgc gggatgcaac tggggctcgt gttgctgcct ggcgtggcaa tcggttttgc
     5461 ctgtgggccg tttctgggcc ggatgctcaa ccggcagcgg gcgcgcattg cggtgttgac
     5521 gatatcgaca ttgagcgcgg tggcgttgtt gctgcgttga ccgaccggcg agggctttgc
     5581 gtgcggatgc gacgcggtcc gcccggcgtc acaccagaca atgcgattaa gctacgacac
     5641 cagcagtgat gtgtcggttt caggtcccct cgacgtgtcg cgtcagttca gggcttaatc
     5701 cctgcgccgg ttttggtctg ggacgggcaa agctgccacg cgacggcggc cgaggccgca
     5761 ggcccacgat cgcctcggcc aaccggaccg agcaactgac gccgtccagc acgggtaccg
     5821 gaatatccgc cgctgcctcg cgagccagcc cggcaatagg cgcgccgccg aagatgatga
     5881 cctcggccgc gtcttgctcg accgcgtgcc ggcattcctc cagcaagcgt gcacgaagct
     5941 ggtctttcgc actggcaatg tcggtgatcg ccacgtccaa aggccgcacg ctgaccaggc
     6001 ggccaacagg gcggattctt cgaggccgag cacggggatg tcggcgaact cgcgcgcggc
     6061 gccgaggccg ggatcgccga acgcggcaat gatcgcggcg tcgtgcgtgg ccatgtgaat
     6121 ggccagcgtg tccaccaccg cgtgcgccgc gatcgcggcc tcgatgcggt tttcgacgta
     6181 ttgtgtgccg aaccgtgccg tcaccgcggc gatttcggtg ccggctgacg cggatctctg
     6241 agcttccgcc gcaaccagat cggttacggc tgtggtgatg ttcgggttga tcagcagcag
     6301 cttcatcgcg agcggctcat cgcccggtca gtatgcgctc gaccaattgc cgcaccgttg
     6361 ggatgaagcc gttcgagtaa aacggatctt tggcgaaacg aaatgcatta tggccggaga
     6421 acaccaggtt attctccagt gcttccgcat cgtcgccggc gtgcgcaacg gcctgcagcg
     6481 ttttctggat gcagaagctg cgcgggtcgg cgcgcttgtt ggtcgagaaa tccggctcgt
     6541 gctgcgacca gttggaaaac cggcaggtgc tgaggcaacc catgcaggaa gcctgatccg
     6601 ccacgatctc ctggctcttt tccggagtca cgaagatcag tgtggagtcg ggtgtgcgca
     6661 atgcctcgat aaagccctgg ctttcccaac cgcgcacgcg gcccaaatcc ggttgggtca
     6721 gataaacgat ccgcttacgc ggtccgacgc catattcggc agcgtgttca cccactggct
     6781 cggtggtgta ggcgacctgc cgctcggtcc ggcccttcaa ttcatgcagg aacgcgttgt
     6841 cgaccgcgct ggagtagaag ccggtgggcg agaagcgatt gaggtagacg tcgccttcct
     6901 gcagcgtcag cagtttctgt ttccacggct ccgggatcgg gctttccttg gtcagcagcg
     6961 gccgggtgcc gaactggaac gcaatcggac cgatttcctt gttgtcgagc caatgggccc
     7021 attcctccaa ccaccagacg ccgccggcca ttatgatcgg agtctcggag aggccgaact
     7081 cgttcatggt cttgcgcagc gtgacgacgc ggggataggg gtcctcgggc ttttccgggt
     7141 tctcgctgtt ggacaggccg ttgtggccgc cggcgagcca ggggtcctcg tatacaacgc
     7201 cgcccaatag cgaggcggtc ttgtgatagg cgcgcttcca cagcgcactg aaggctcgcg
     7261 ccgaggagat gatcgggtag tagtgcacgt tgaaccgggc ggcgatgtcg gacagccggt
     7321 agggcatgcc ggcgccgcag gtgatgccgt tgatcaggcc cttggcctgt tccagtacct
     7381 cggtgatgac gcgttcggcg ccgcccatct cccacaggat attggcgtgg atgcggccct
     7441 tgcctccggt gatgtcgaac gccttccgcg cctgtgccag cgcgcctttg atggcgtagg
     7501 cgatgagttc ctcgtgccgc tcccgccgcg tgcgggcgtg atactcctgc gggatcggct
     7561 tgccgtcctc gtcatagctg tcggcgttga ctgcgctgat ggtgccgatg ccgccgccaa
     7621 gagcccagtg accggcggtc gtgccgttgg agacggcgac gcccttgccg ccctccacca
     7681 aaggcaggac gtcaaagcca cccatccgga ttgcgttgat cgcttgcatt gcgggtcagt
     7741 tcgaggccca gggccgttgg gccgcaggcg tgcgagggaa cccggtcagg cgagatagag
     7801 gcatggggca gggcgtctcc aggcgggtga gcttcataac cgatagcagg cgccgccgtg
     7861 caagagaatg gcagccatat ggtactgggc ttaggcattg tcacccggcc tcgggtggga
     7921 atcggtgtct tcgcagcatg ggcgagacgg tcagtctcac gccggctcca tagcggactg
     7981 tgacggattt gttaacgcat aatgaaattt atgatcgcgg ggaacccggg cggaagtatg
     8041 tcacagcgtt atcagctaag atctcgtggt tttcgacgga tggggcggag gcatgatctc
     8101 ttcgctgagg ggcgggaggc gtgcacccca ggttgtggcc gcgcagtcgg gcgtgtctga
     8161 cggacagatc atgataggcg tccgcctgag caactcttga aatgctttgt tgtgggtacc
     8221 aaactgtggt actcgcctgc gaggaggacc gccggatgcg caagaacacg tcaattagcc
     8281 tcggggaaca cttcatccaa ttcgtcgaag cgcaggtcgg tcaaggtcgt tacggcagtg
     8341 ccagcgacgt tgttcgcgcc gggttacgtt tgttggagga gcaagaagcg aagcttgagg
     8401 cgctgcgatc cgctctgatc gaaggcgagc aaagcggctc atcaacgccg ttcgatttcg
     8461 aagcattcat tgcgaggaaa cggggggc
//
LOCUS       DATAVD010000766        10101 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1561973, whole genome shotgun sequence.
ACCESSION   DATAVD010000766 DATAVD010000000
VERSION     DATAVD010000766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10101
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1561973"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VHX39_14645"
     CDS             complement(<1..195)
                     /locus_tag="VHX39_14645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992406.1"
                     /translation="MSATEAPPFDVRDPAFLADPYPVFNRLRTSTPAFKALGRWFITR
                     YDDTTQLLRDRRFGKDYADPD"
     gene            209..592
                     /locus_tag="VHX39_14650"
     CDS             209..592
                     /locus_tag="VHX39_14650"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEX3992407.1"
                     /translation="MLTPEDTTCRAKSSTDGAKARNLINDPDNTIVVSAATIWEIAIK
                     HALARGGANDMPISGDDAAGFFREAGFEMLDISPTHAAAVETLASLHGDPFDRLLVAQ
                     SMAVLLRLVTQDQKIAAYSNSIILV"
     gene            complement(606..854)
                     /locus_tag="VHX39_14655"
     CDS             complement(606..854)
                     /locus_tag="VHX39_14655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3297 family protein"
                     /protein_id="HEX3992408.1"
                     /translation="MPDVPPDRLSNDPASKFYDEDILRRGIGIRFKGVEKTNVEEYCV
                     SEGWVRVAVGKTLDRRGKPLTMKASGAVEPYFRDIPTE"
     gene            1026..1715
                     /locus_tag="VHX39_14660"
     CDS             1026..1715
                     /locus_tag="VHX39_14660"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3992409.1"
                     /translation="MATYVLLHGAYQGGWIWQRVAPHLRAAGHTVFTPTLDGCGERRH
                     ALRPGIDTETQAAEISEMLFFEDLHDIVLVGTSCGGMVAARVAETARDRIGRIVLADA
                     LALFDGETVADHVKRPTAMTTDVGTGPSHEDAANRMFVSLDGPTKEWALARYTPHPIA
                     AMAAPVKLDSFWQQTWNASVIWCRQSVNPPVSHQKRAAETLKARWYELDTGHYPMLTE
                     PKALAGLIMAE"
     gene            1770..2942
                     /locus_tag="VHX39_14665"
     CDS             1770..2942
                     /locus_tag="VHX39_14665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008495491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA acetyltransferase"
                     /protein_id="HEX3992410.1"
                     /translation="MTEACIVGWAHSPFGKLEDPDIESLIGRVAGAAIADAGIAPHEI
                     DSTFLSLFNNGFSVQDFPASLVLQHVPDLRFKPITRFENACASGSAAVYGARDFLLSG
                     RGKIALVIGVEKMTATPGKEVGDILLKASYQKEEADIPAGFAGVFGRIADTYFQRYGD
                     QSDALAAIAAKNHKNGVDNPFAQMRKDLGYDFCRNVSEKNPYVAPPLKRTDCSLVSDG
                     AVALIMADEETARAMGKAVRFKAAVQVNDFLPISKRDITQFEGAAQAWARALEAADVG
                     LTDLSFVESHDCFTIAELLEYEAMGLTPAGKGARAVLEGWTAKDGRLPINPSGGLKAK
                     GHPIGATGVSMHAITAMQLVGEAPGGMQLPKADLGAVFNMGGAAVANYVSILEPLR"
     gene            2942..4477
                     /locus_tag="VHX39_14670"
     CDS             2942..4477
                     /locus_tag="VHX39_14670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HEX3992411.1"
                     /translation="MPTTNLAALLIQTARRFPDRPAIVWRDSVWTWAAFRDRVQASAA
                     ALAARGVRHGDRVLLHARNSNAVLETMFATWMLGAVWVPTNFRLTPPEVAYLAQSSGA
                     TVHIFDSAFPDHAVAARSENPACRVEISIGGHGADDWEAFAGFAGRVTEPADVDRDHP
                     AWFFYTSGTTGRPKAGVLTHGQMDYVVCNHLCDLMPATTEQDASLVVAPLSHGAGVHA
                     LPQIARGAATILLSGERLDCEEAWSLVERHRVTNMFTVPTILTMLTRHDAVDRYDHRS
                     LRYVIYAGAPMYRADQVHALRKLGSVLVQYFGMGEVTGNITVLPPSLHSEKDDEMPVG
                     SCGFPRTGMDVAILDENGRPAETGEICVRGPGVFSGYHNNPEATTKATAHGWFHTGDL
                     GHMDARGFVYITGRASDMYISGGSNVYPREIEEALLLHPAVAEACVLGMPHEKWGESG
                     VAVLVLEPGSQVSAGELLTHLDGRLAKYKWPAEFVFWPELPKSGYGKVTKRDVKHLLQ
                     KDA"
     gene            4474..4836
                     /locus_tag="VHX39_14675"
     CDS             4474..4836
                     /locus_tag="VHX39_14675"
                     /inference="COORDINATES: protein motif:HMM:NF020457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DOPA 4,5-dioxygenase family protein"
                     /protein_id="HEX3992412.1"
                     /translation="MMPTPPIEPTHITDYHMHVYYDTESRDQAAQLRQWVEERFTVRM
                     GRWHDVPVGPHVQAMYQIQFMPELFPTLVPFVMMNRLGLTVLLHPQSGRPRDDHTINA
                     TWMGAVLPVKTEVLRESD"
     gene            complement(4837..6135)
                     /locus_tag="VHX39_14680"
     CDS             complement(4837..6135)
                     /locus_tag="VHX39_14680"
                     /inference="COORDINATES: protein motif:HMM:NF015527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase family 2 domain-containing
                     protein"
                     /protein_id="HEX3992413.1"
                     /translation="MLTGQYRRIFHYHLKKCGGSTFNRWLDTLTFDARTHELAAGKGF
                     SVVDSKADETGMMRDMVIPSLAKAVFHWSDVVHSHGPLRMYAPEDTFCLTMLRDPVQR
                     VISQFLDFRRLRKADAAKSPPEVRACIEDSHHLSLRDFLEKHGQGGGRRYLDNYMTKA
                     LVAGRIGNVIEDTSDPDRLCEAALVSLERDYDLVGLTEHLDLSRNAMCSMVGLPPARQ
                     VPTVNATRSVLQNDMELRGARDILRRLTHVDRVVYDRARQLFDRRHRQAAESYGIDVF
                     EDRYAANLLAEARGSASNGATRYSVRAPIMGSGYHGRDGSGLTSCAVWTGPDTRMTLY
                     MATPPNMQLSLLVWIRGYVDARQRDQLRVRVDGRSVPHYFGVADDYADVLTIDTHSTR
                     DFIRLEIDLEETLESGDPGTELHDARERGFAFDSYGWRPL"
     gene            complement(6169..7155)
                     /locus_tag="VHX39_14685"
     CDS             complement(6169..7155)
                     /locus_tag="VHX39_14685"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3992414.1"
                     /translation="MDTDLASNAAALEEALQTALTAAWQTLSGFRVGVPQQTDVFVYC
                     KMLDQVLTGLAESGEIDAVEAVMRHVDYLADKAGCHASVVLGGGHFTTHPQIVADALV
                     NISTVLQQAVRNRPERSPEGIPDDVFALIQEAEAKLAGWCSREKALTIARIVLEERPK
                     TCVEIGVFGGRSLMPCAAALRHNGEGEIYGIEAWSPNVAIENVTNEANDDWWSKIDFA
                     GIKREFYRFAAATNLTSHLRLIEAPSGRAAGLFDTIDYLHIDGSHSMVNAAEDVILYA
                     RKVRVGGIVVFDDVNWASTAPARDLLAALCDTVTVLKDPESGLDICAVLRRR"
     gene            complement(7191..8429)
                     /locus_tag="VHX39_14690"
     CDS             complement(7191..8429)
                     /locus_tag="VHX39_14690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992415.1"
                     /translation="MNTSFASSGYRLDTTERATPVVSLDVRTQTGPIKPHRRKRRWRV
                     ASLLLAVVLPTALAGTYLYGYADDQYVTEFRFSVRHEAPLRMDATAGSTLPASLGGST
                     SPLAVITDSQVVIQYLKSRQVIDDIVASGVNLDAIYARTDKDFLAHLHPHASAEEQLR
                     YWRRMVDPFFDMSTGIVSVKVRAFSPTDAQVVAATALRLAEKLVNNMSSRAHNDVLVY
                     ATSEVGASEAKLKESQDTIASFRNRHAVLFPEMQATSDTSVEGKVWENLIEAKTAFNA
                     QRAVGVSADTMQMRMLGNRIAAMETALRDVHAHMAQTSGGSTSDASLASVISEYDILR
                     LDQDIAAKVYERALMALQDAKNAASQQSVYLAAFVRPALPQESMYPVRWRIMTETALL
                     SFVAWCLLQLLYHGIRDHID"
     gene            complement(8426..9112)
                     /locus_tag="VHX39_14695"
     CDS             complement(8426..9112)
                     /locus_tag="VHX39_14695"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3992416.1"
                     /translation="MIVLDHVHKAYRTIEGHQVVLRDVSVAVPEGHGLGVLGANGAGK
                     STLIRLLAGTEQPDSGRISRGNKAVSFPLGFGGTMHPRLSGLENVTFLARLYDVDERQ
                     AAAYVEEFAELGTYFRMPVGTYSGGMRARLAFGACLAIQFDVYLIDEVTSVGDARFRI
                     KCLDAFRQRMDRADVIMVTHDYETMRAYCDIGAVLRNGTLTLFDDLEVAIEYYARTMS
                     SQPNSTMEIA"
     gene            complement(9109..>10101)
                     /locus_tag="VHX39_14700"
     CDS             complement(9109..>10101)
                     /locus_tag="VHX39_14700"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3992417.1"
                     /translation="SGVHAALGQLAEALQAAERAVELAADDPECQAHLKYVTSLCALP
                     VDHGEAADWLVSKSKAPRIRRESRAPTFSEDIATRWRVIYAIMLRDIRTRFGQTRLGY
                     FWAIMEPITHLMTLGTVFYAVNHSPPPVGDNMFLFYITGLVPFLMFSHVSHDVMSASE
                     ANNVMLQLPIVKRTDIMMAHALRQFATEICVGIIIFSIAALLGYRGAPADTMTAMTAI
                     TLLWLLAIGVGAFNLVILEAFPSYETLYASLIRLLYVASGIYFSPISMPDWVRDILVW
                     NPILQGIEYFRSGFFPQYDPHWVDVNYLLIWVVASIGIGFSLERALRSRMVVYT"
BASE COUNT         2002 a         3073 c         3132 g         1894 t
ORIGIN      
        1 gtcgggatcg gcgtagtcct tgccgaagcg gcgatcgcgc agaagctggg tggtgtcgtc
       61 gtagcgggtg atgaaccagc ggccgagcgc cttgaaggcc ggggtggagg tgcgcagtct
      121 gttgaacacc ggatacggat ccgccaggaa ggccggatcg cggacgtcga atggcggagc
      181 ctcggtcgcc gacatgggat gcgtcctatt gctgacgccg gaggatacca cgtgccgagc
      241 gaaatcttcc accgacggag ccaaagcccg aaatctcatc aatgatcccg acaacacgat
      301 cgttgtcagc gccgccacga tctgggaaat cgccatcaag catgcgctgg ctcggggtgg
      361 cgcgaacgac atgccaattt ccggtgatga cgcagcggga tttttccggg aggcgggttt
      421 cgagatgctg gacatctcac ccacccatgc cgccgcggtc gaaactctgg cgtcactgca
      481 tggtgacccg ttcgatcgcc tgcttgttgc ccagagcatg gcggtcctat tgcggctcgt
      541 cacccaggac caaaaaattg ccgcctatag caactcaatc atcctggtat gagcagccac
      601 accgcctatt ccgtaggaat atcccggaaa tagggttcga ccgccccgct ggccttcatg
      661 gtcaacggtt tgccccggcg gtcgagagtc ttgccaacgg cgacgcggac ccagccttcg
      721 ctgacgcaat attcctcgac attggtcttc tccacgccct tgaagcggat gccgatgcca
      781 cgccgcagga tatcctcatc atagaacttg ctggcagggt cgttggacag gcggtcgggc
      841 ggaacgtcag gcatggggaa cctccaggcg atcaagcgac gccggatacc gatcccggac
      901 gcggctgtcc atgtccgcgt tccaccgttc gggtaagtcg ccgggtccgc cgcgatcaac
      961 gacgagtggc gtctcctgcc gtcctgtgct gatctcgacc ccagaatgag ggggagaaaa
     1021 cgcacatggc aacctacgtc ctgctccacg gcgcctacca gggtggatgg atttggcagc
     1081 gtgtggcgcc gcacctgcgg gccgccggtc acacagtctt tacgccgacg ctagatggct
     1141 gcggggaacg ccgccacgcg ctgcggccgg ggatcgatac cgaaacccag gcggcggaaa
     1201 tctccgaaat gctgttcttc gaggatctgc atgacatcgt ccttgtgggc acaagctgcg
     1261 gcggcatggt cgccgcgcgt gtcgccgaga ctgcccgcga ccggatcggc cgcatcgtgc
     1321 ttgccgacgc gctggcgctg ttcgatgggg aaaccgtcgc cgaccatgtg aaacggccaa
     1381 cggcgatgac caccgatgtc ggtacaggcc cgtcccacga ggatgccgcc aaccggatgt
     1441 tcgtctcgct ggacgggccg acaaaagaat gggcgctcgc gcgctatacg ccgcacccga
     1501 tcgcggcgat ggcggccccg gtcaagctgg acagtttctg gcagcagacc tggaatgcct
     1561 cggtgatctg gtgccgccaa agcgtcaatc cgccggtcag ccaccagaag cgggcggcgg
     1621 agaccttgaa ggcacgctgg tacgaactcg acaccggcca ctaccccatg ctgaccgaac
     1681 cgaaagccct ggcggggctg atcatggcgg aatagcctgc cgacactaca tgacgttaaa
     1741 cgaccgccct ggtctcagga ggaaccatca tgaccgaagc ctgcatcgtt ggctgggccc
     1801 actcgccgtt cggcaagctt gaagaccccg atatcgagtc cctgatcggc cgcgtcgccg
     1861 gtgccgcgat cgccgatgcc gggatcgcac cgcacgagat cgattcgacc ttcctcagcc
     1921 tgttcaacaa tggattctcg gtgcaggact tcccggcatc gctggtgctg cagcatgtac
     1981 cggacctccg gttcaagccg atcacacggt ttgagaacgc atgtgcctca gggtctgccg
     2041 cggtgtacgg cgctcgggat ttcctgctgt caggccgagg caagatcgcg ctggtgatcg
     2101 gggtggagaa gatgaccgcc acccccggca aggaagtcgg ggatatcttg ctgaaggcca
     2161 gctaccagaa agaagaggcc gacatcccag ccggttttgc cggggtgttc gggcggatcg
     2221 cggacacgta tttccagcgc tatggcgatc agtcggacgc gctggccgcg atcgcggcaa
     2281 agaaccacaa gaacggcgtg gacaacccct tcgcacaaat gcggaaggac cttgggtatg
     2341 acttctgccg caacgtcagt gagaagaacc cgtatgtggc gccgccactg aagcggacag
     2401 actgctcgct ggtctcggac ggcgccgtgg ctctgatcat ggcggatgag gaaaccgcgc
     2461 gcgccatggg caaggcggtc cgcttcaagg cagcggtgca ggtcaacgat ttcctgccga
     2521 tcagcaagcg cgacatcacg cagttcgagg gtgcggcgca ggcctgggca cgcgccttgg
     2581 aggcggcgga cgttgggctg accgacctgt ccttcgtcga atcgcatgac tgcttcacca
     2641 tcgccgaact gctggaatat gaggcgatgg ggctgacccc ggccggcaag ggtgcgcgcg
     2701 cggtgctgga agggtggacg gcgaaagatg ggcggctgcc gatcaatccg tccggcgggt
     2761 tgaaggccaa agggcatccg attggggcca ccggtgtgtc gatgcatgcg attaccgcca
     2821 tgcaattggt cggtgaggcg ccgggcggca tgcagttgcc gaaggccgat ctgggtgcgg
     2881 tgttcaacat gggcggcgcg gcggtggcca attacgtctc gatcctggag ccgctccgct
     2941 gatcccgacc accaaccttg cggcgctgct gatccagacc gctcggcggt ttcccgaccg
     3001 gccggcgatc gtctggcggg attctgtctg gacctgggcg gcgtttcgcg accgggtcca
     3061 ggcgtcagcg gcggcgctgg cggcgcgcgg tgtgcggcat ggcgatcggg tattgctaca
     3121 tgctcggaat tccaacgccg tgctggagac gatgtttgcg acgtggatgc tgggtgcggt
     3181 ctgggtgccg acgaatttcc ggctgacgcc gccggaggtc gcgtatttgg cgcagtcgtc
     3241 cggtgccacg gtgcatatct tcgatagtgc gtttccggat cacgccgtgg ccgcccgtag
     3301 tgaaaacccg gcctgccggg tggagatttc gatcggcggc cacggcgcgg acgattggga
     3361 ggcgtttgct ggtttcgccg gccgggtaac cgagccggcc gatgtggatc gggatcatcc
     3421 ggcgtggttc ttctatacct ctggcaccac cgggcgaccg aaggcgggcg tgttgacgca
     3481 tgggcagatg gattatgtcg tctgcaacca tctgtgcgac ctgatgccgg cgacgacgga
     3541 acaggatgcc tcgctggtgg ttgcaccgtt gtcgcatggc gccggggttc acgccctgcc
     3601 gcagatcgcg cgcggcgccg ccaccatcct gctgtccggc gagcggctgg attgcgagga
     3661 agcgtggagc ctggtcgaac gccaccgcgt caccaacatg ttcaccgtac cgacgatcct
     3721 gaccatgctg acgcgacacg acgcggtgga tcgttacgat cacagatccc tgcgctatgt
     3781 catctacgca ggcgcgccga tgtaccgcgc agaccaggtg catgcgctgc gcaaactggg
     3841 atccgtgctg gtgcaatact tcggcatggg agaagtaaca ggcaacatca ccgtgctgcc
     3901 gccgtcgctg cacagcgaga aggatgacga aatgccagtg ggaagctgcg gctttccacg
     3961 caccgggatg gatgtcgcga tcctggatga gaacgggcgc cccgcggaaa ccggcgaaat
     4021 atgtgtgcgc gggccgggtg tgttttcggg ctatcacaat aatccggagg cgaccaccaa
     4081 agccaccgcg catggctggt tccataccgg tgacttggga cacatggatg ccaggggttt
     4141 cgtctatatc accggacgcg cgtcggacat gtatatctcc ggcgggtcga acgtgtatcc
     4201 tcgggagatc gaggaagcct tgctgctgca cccggccgtc gcggaagcct gtgtcctcgg
     4261 gatgccgcac gagaaatggg gtgagtccgg ggtcgccgtg ctggtgctgg aaccggggtc
     4321 tcaggtatcg gcgggggagt tgctgacgca tctggacggc aggctggcga aatacaaatg
     4381 gccggcggaa ttcgtctttt ggccggaact gccgaaatcc ggctatggca aggtcaccaa
     4441 gcgcgacgtg aaacatctgt tgcaaaagga cgcatgatgc cgaccccgcc gattgagccc
     4501 acacacatta ccgactacca tatgcatgtc tactacgaca cggaaagtcg tgaccaagcc
     4561 gcacagttgc gacaatgggt ggaggaacgt tttaccgtgc gcatggggcg ctggcacgac
     4621 gtgccggtgg gcccacacgt gcaagcaatg taccagatcc agttcatgcc cgagttgttc
     4681 cccacgctgg tgccgttcgt gatgatgaac cggctcgggc tgacagtcct gttgcatccc
     4741 cagtcaggcc ggccgcgcga cgaccacacg atcaatgcaa cgtggatggg cgcggtgctg
     4801 ccggtcaaga ccgaggtgct gcgggagagc gattgatcag agcggacgcc agccgtagct
     4861 gtcgaatgcg aatccacgct cccgcgcgtc atgcagttca gtgcccggat cgcctgattc
     4921 cagcgtttcc tccagatcaa tctccaaccg gataaaatcc cgggtggaat gggtgtcgat
     4981 tgtcagcacg tcggcgtagt catcggcaac gccgaaatag tgcgggaccg accggccatc
     5041 gacccgcacg cgaagctggt cgcgctggcg ggcatcgaca tagccacgta tccagaccag
     5101 cagcgacaat tgcatgttcg gcggagtcgc catgtacaat gtcatgcggg tatcagggcc
     5161 ggtccagacc gcgcaggacg tcaagccgct gccgtcacgt ccatgatagc ccgatcccat
     5221 gattggcgcc cgcaccgaat aacgggtcgc accgttactg gcggacccgc gggcttccgc
     5281 cagcagattg gcggcgtaac ggtcctcgaa gacatcgatg ccataagact ctgccgcctg
     5341 gcgatgccgc cgatcgaaca attggcgagc ccgatcgtag accacgcgat ccacgtgcgt
     5401 cagcctcctc aggatgtcgc gtgcgccacg caactccata tcgttctgaa gcaccgatcg
     5461 ggttgcgttg acggtcggaa cttgacgcgc cggcggcaat cccaccatcg agcacatggc
     5521 attgcgactc aggtcaagat gttcggtgag cccgacaagg tcatagtccc tctccaggct
     5581 caccaaggca gcttcacaca gacggtcggg atcgctcgtg tcttcgatta cgttgccgat
     5641 ccgtccggcg accaaagcct ttgtcatata attgtccaga tatctgcgac cgccaccttg
     5701 cccatgcttt tccagaaaat cgcgcaagga caggtgatga ctatcctcga tgcatgcgcg
     5761 gacctccggc gggcttttgg cggcatcggc cttgcgcaag cgacgaaagt ccagaaactg
     5821 cgaaatgaca cgctgaaccg gatccctgag catcgtcagg cagaacgtgt cttccggcgc
     5881 atacatgcgg agcggtccat ggctatgcac cacgtcgctc caatgaaaca ccgctttcgc
     5941 gagtgacggg atgaccatgt cgcgcatcat tccggtctca tctgcctttg agtctacgac
     6001 ggaaaacccc ttcccggccg cgagttcatg ggtccgcgca tcgaaggtca gggtgtcaag
     6061 ccaacgattg aatgtcgagc ctccgcattt cttcagatga taatgaaata ttcttctata
     6121 ttgtcctgtc agcatctcgt cccagcccgt ctatttagaa atcgcttctt accggcgccg
     6181 cagcaccgca cagatatcca atccgctttc cgggtccttc agcaccgtca ccgtgtcgca
     6241 aagtgcggca agaaggtccc gcgccggcgc cgtggatgcc cagttgacgt cgtcgaacac
     6301 gacaatgccg ccgacgcgga ccttgcgggc gtacagaatg acgtcctcgg cggcattgac
     6361 catggaatga gacccgtcga tgtgcaggta gtcgattgta tcgaacaacc cggcggcccg
     6421 tccggatggc gcctcgatca gtcgcaggtg cgacgtcaga ttcgtcgcgg cggcgaaccg
     6481 gtagaattcc cgcttgatgc cggcgaaatc gattttggac caccagtcgt cgttagcctc
     6541 gttcgtcaca ttctcgatcg cgacgttcgg gctccacgcc tcgattccat agatctcccc
     6601 ttccccgtta tgccgcaggg cagcggcgca cggcattagt gagcggccac cgaaaacgcc
     6661 gatttcgaca caggttttcg ggcgttcttc caggacgatg cgggcaatcg tcaacgcctt
     6721 ctcccgtgag caccagccgg cgagcttcgc ttccgcttcc tgtatcagcg caaagacgtc
     6781 gtcggggatg ccttcaggcg atcgttccgg ccggtttcgc acggcctgct ggagaacggt
     6841 gctgatattg acgagcgcat ccgcgacgat ctgcgggtgg gtggtgaaat ggccgccgcc
     6901 caaaacaacc gacgcgtgac agccagcctt gtcggcaagg tagtcgacgt ggcgcatgac
     6961 agcttcgacc gcgtcgattt caccggactc ggccaacccg gtcagcacct ggtccaacat
     7021 cttgcagtag acgaacacat cggtctgctg tgggaccccg acacggaatc ccgacaatgt
     7081 ctgccacgcg gcggtcagcg cagtctgcag cgcttcttcc aatgcggccg cgttggaagc
     7141 gagatcagta tccattgaaa agaccttcga tgattgcggg gatatgtatt tcagtcgata
     7201 tggtcacgga ttccgtgata cagaagctgc agcaggcacc aggccacgaa gctcagcagc
     7261 gccgtttccg tcatgatgcg ccagcgaacc ggatacatcg attcctgcgg caaagcgggc
     7321 cgcacgaaag ccgcgagata cacactctgc tggcttgccg cgttttttgc atcctgcaag
     7381 gccattaggg cgcgttcata aaccttggcg gcgatgtcct ggtcgagccg gaggatgtca
     7441 tattccgata tgaccgaggc cagcgacgca tccgacgtgc tgccgccact ggtctgcgcc
     7501 atatgtgcgt gaacgtcccg caacgccgtc tccatcgccg cgattcgatt tcccagcatc
     7561 cgcatctgca tcgtatcggc ggagacgccc acggcgcgct gcgcattgaa ggcggtcttc
     7621 gcttcgatga gattttccca caccttgcct tcgacggacg tgtccgacgt ggcctgcatt
     7681 tccggaaaca ggaccgcatg acgattccgg aatgatgcga tcgtgtcttg cgactccttc
     7741 agtttcgcct cgcttgcccc gacttcgctg gtcgcataga ccagcacgtc gttatgagcc
     7801 cggctggaca tgttgttgac cagcttttca gccaatcgca gcgccgtcgc ggcgacaacc
     7861 tgggcgtcgg ttggactgaa ggcacgcacc tttacggaaa caatgccggt cgacatgtcg
     7921 aagaacggat cgaccatccg tcgccagtag cgcaactgct cctccgccga cgcgtggggg
     7981 tgaagatgcg ccaggaagtc tttgtcggtc cgcgcgtaga tcgcatcgag gttcacacct
     8041 gatgcgacga tgtcgtcgat cacctggcga cttttaagat attggatgac gacctgcgaa
     8101 tcggtgatca cggccagcgg cgaggtacta ccgcccagcg atgcaggtaa cgtactgccg
     8161 gcggtcgcat ccatccgcaa gggagcttcg tgacgcacgc tgaaacggaa ttccgtcaca
     8221 tactggtcgt cggcgtaacc gtacagatac gtgccggcca aggcggtcgg cagcacaacg
     8281 gcaagaagca acgacgccac gcgccaacgc cgcttcctgc gatgcggctt gataggcccg
     8341 gtctgtgtgc ggacatcaag cgataccacc ggagtcgccc gttcggtggt atccaggcgg
     8401 tagcccgagg aggcgaagct ggtgttcatg ctatctccat ggtgctgttc ggttgactcg
     8461 acatagtgcg cgcatagtat tcgatcgcga cttccagatc gtcgaagagc gtcagtgtgc
     8521 cgttacgaag tacagcccca atatcacagt acgcgcgcat cgtttcataa tcatgggtga
     8581 ccatgatgac gtccgcacga tccatccgct gacgaaacgc gtccagacac ttgatgcgga
     8641 aacgcgcgtc accgaccgac gtaacctcat cgatcaggta gacgtcgaac tggattgcca
     8701 gacacgcacc gaacgccagc ctggcgcgca tgccgcccga atacgttccg accggcatcc
     8761 ggaaataggt gcccagttcg gcgaattcct cgacataggc agcggcctga cgttcgtcga
     8821 cgtcgtagag tcttgcgagg aacgtaacgt tttccagtcc gctaagtctc gggtgcatcg
     8881 tgccgccaaa gcccaacgga aagctgaccg ctttgttccc ccggctgatc cggcccgaat
     8941 ccggctgttc ggttccggcg agcaagcgga tcagcgtgga cttgccggca ccgttggcac
     9001 cgagaacgcc caggccatgg ccttcaggaa ccgccacact gacgtcgcgg agcacaacct
     9061 ggtggccctc gattgtgcga taagccttat ggacgtgatc gagaacgatc atgtgtacac
     9121 caccatccgt gaccgcaatg cccgttcaag cgagaagccg atgccgatcg acgccacgac
     9181 ccatatcaac aggtagttca cgtccaccca gtgcggatcg tactgcggaa agaagccgct
     9241 gcggaagtat tcgatgccct gcagtatcgg gttccacacc aatatgtctc gcacccagtc
     9301 aggcatcgaa atgggggaga aatagatgcc cgaagccacg tagagcaggc gaatcagtga
     9361 ggcgtacaga gtttcatacg atggaaacgc ctccaggata accaggttga acgcgccgac
     9421 accgatggcg agcagccaga gcagggttat ggcggtcatc gcggtcatcg tatcggccgg
     9481 cgcaccgcgg tagccaagca aggcggcaat ggaaaagatg atgatcccta cacatatttc
     9541 ggtcgcgaac tggcgcagcg catgagccat catgatgtcg gtgcgcttta cgatcggcag
     9601 ttgcaacatc acattgttcg cctcggacgc actcatgacg tcgtgggaga cgtgggagaa
     9661 catcaggaac gggaccaggc cggtgatgta gaacaggaac atgttatcgc cgactggcgg
     9721 cggtgaatgg ttcaccgcat agaagacggt gcccaaggtc atcagatggg tgatcggttc
     9781 catgatcgcc cagaaatacc cgagcctggt ttgcccaaac cgggtacgga tgtcgcggag
     9841 catgattgcg tagatcaccc gccagcgggt agcgatatcc tcgctaaagg tcggcgctcg
     9901 gctctcccgg cggatcctgg gcgctttact tttgctcacc agccagtcgg ccgcctctcc
     9961 atgatccacc ggcaatgcgc acagactggt cacatatttc agatgtgcct ggcactctgg
    10021 gtcgtcagcg gccagttcga ccgcccgttc ggcagcctgc agcgcctcgg cgagctggcc
    10081 caaggcggca tggacaccgc t
//
LOCUS       DATAVD010000767         1690 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1001819, whole genome shotgun sequence.
ACCESSION   DATAVD010000767 DATAVD010000000
VERSION     DATAVD010000767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1001819"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            63..1406
                     /locus_tag="VHX39_14705"
     CDS             63..1406
                     /locus_tag="VHX39_14705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013039223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1380 family transposase"
                     /protein_id="HEX3992418.1"
                     /translation="MPVDTTLPFHFPAVGRKKLTAAFDGGRITSDGGVMLLGAVERQL
                     GIADRLARLIPDPRNPLFVTHSIDDILRARILAIACGYEDADDLDHLRTDPGFKLACG
                     RLPDSGDDLCSQPTVSRWENAPTLREVVRMTYAMVDLYCSSYARPPAAVTLDIDDTCD
                     VVHGNQQLSLFHAHYNERCFLPIHVYDTATSRPVAILLRPGKTPTGDEIRSHLRRLVR
                     RIRQHWPDTRLTIRGDSHYGRPEVMAWCEAHGLDYIFGLSGNAVLDRLVEPFADDVRV
                     CRAEAQAAAVRRYSETRYGAKSWKCERRVVARIEATTKGLDIRYVVTNLPKGTAEWLY
                     DKMYCARGQAENLIKLHKTELASDRTSCRSPLANQVRLVLHTAAYWVLLTVRDAIPRP
                     QPLATAQFKTLQLHLIKIAARVTETATRVRIAFATACPNADLFSGLVRGFLPAGP"
BASE COUNT          306 a          587 c          493 g          304 t
ORIGIN      
        1 gcgcttaggg attgggtgtc gaagccatcc tgtccacgtg aacgcgccga gccacacccg
       61 ccatgcctgt tgatacgacc ttgccgttcc attttccagc cgtcggtcgc aagaagctga
      121 ccgccgcctt cgatggtgga cgcatcacat ccgatggcgg cgtcatgctg ctcggcgcgg
      181 tggagcggca gttggggatc gcggataggc tcgcgcgact gatccccgat ccgcgcaatc
      241 cgttgttcgt gacgcacagc atcgacgaca tcctgcgcgc ccgcatcctt gccatcgctt
      301 gcggctacga agacgctgac gacctcgatc atctgcgcac tgacccaggg ttcaagcttg
      361 cctgcgggcg cctgccggac agcggtgatg atctctgctc gcagccgact gtttcgcgct
      421 gggagaacgc acccaccctg cgcgaggtgg tgcgcatgac ctacgccatg gtcgacctgt
      481 actgctccag ctacgcccgt ccacccgccg ccgtcactct ggatatcgac gatacctgcg
      541 acgtcgtgca tggcaatcag caactttctc tattccacgc acattacaac gagcggtgct
      601 tcctgccgat ccacgtgtac gacacggcca cctcgcggcc ggtggcgatc ctactgcggc
      661 cgggcaagac gccgactggt gacgagattc gcagccatct gcggcgtctg gttcgccgca
      721 tccggcagca ctggcccgat acccgtctga caattcgcgg cgatagccac tacggccgcc
      781 ccgaggtgat ggcctggtgc gaggcgcatg gcctggacta catcttcggc ctgtccggca
      841 acgccgtgct cgaccggctg gtggaacctt tcgccgacga cgtgcgagtg tgccgtgccg
      901 aggcccaggc cgctgccgtc cgccgctaca gcgagacccg ctacggcgcc aaatcgtgga
      961 aatgcgagcg ccgcgtggtg gcccgcatcg aggccaccac caagggactg gatatccgct
     1021 acgtcgtgac gaacctgccc aagggcaccg cggaatggct gtatgacaag atgtactgtg
     1081 cccgcggcca ggccgagaat ctgatcaagt tgcacaagac cgaactcgcc tccgaccgca
     1141 cgagttgccg ctcgccgctc gccaaccagg tgcggctggt gctgcatacc gctgcctact
     1201 gggtgttgct gaccgtccgt gacgccattc ccagaccgca gccactcgca accgcccagt
     1261 tcaaaacctt gcagctgcac ctgatcaaga ttgccgcccg tgtcaccgag accgcgacca
     1321 gggtgcgcat cgcctttgcc accgcctgcc ccaacgccga tctgttcagc ggactggtgc
     1381 ggggtttcct gccagcaggg ccgtgacccg cggggccttt gcccccgaaa ccgtcatgtc
     1441 ccacccaacc ctcaacgcct gccattttcg ttctgaacaa gcgacaaaga agcgcgtcga
     1501 gcagccgcgc cctacgcgtt tccgccttta tcagcgctta ccgctgaata ggacgggcta
     1561 gagacctgaa tgccatcgcc aatgtagttg acaaaactcg ccgggttcag gaggccaaga
     1621 tctgtcgcac cgctagcgaa accgaagata ttggcccgcc cgctggacgt gaccgacata
     1681 ttgagcgccg
//
LOCUS       DATAVD010000768         6397 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_819793, whole genome shotgun sequence.
ACCESSION   DATAVD010000768 DATAVD010000000
VERSION     DATAVD010000768.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6397
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_819793"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /locus_tag="VHX39_14710"
     CDS             complement(<1..410)
                     /locus_tag="VHX39_14710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992419.1"
                     /translation="MNRVAILAGLLAAVALPASAQLNITEPLASVDLPAPQSPPQPGV
                     GPSTEHLFGDWGGLRTRLENDGIYLGLDALTEFAGNVSGGTKQGSTFANQVAFTADVD
                     WQRLAGVTGLSSHLIMVNRSGANDSNLFGDHLLPV"
     gene            complement(407..1810)
                     /locus_tag="VHX39_14715"
     CDS             complement(407..1810)
                     /locus_tag="VHX39_14715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0051119 - sugar transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HEX3992420.1"
                     /translation="MQFLLIAITAALGGLLFGYDTGVISSALLFVRTVFHLSTAGQSI
                     VAGIVLVGAVLGASVAGSLSDRFGRRLVILVTALAFVIGALLSASADGVPVLLAGRLL
                     IGIAIGVASMLTPLYLAEIAPAASRGAVTSLNQLCITLGILVSYLIGYAFADASEGWR
                     WMLGLGAVPGAILALGMLVLPESPRWLAGHNRMPQAEAVLRRLRASPAEVADELATLR
                     TDLKREGGRLVPWSALLAPRLRPALIVGIGLAMFQQVTGINTVIYFAPQIFQAAGLSS
                     ASVSILATAGVGAVNVLLTIVSMWLIDRAGRRALLLWSLGGMAATLMILAGGFALGTS
                     GALAWITVLSVAAYVAFFAVGLGPVFWLLIAEIFPLAVRGRAMSLATISNWGFNLVVT
                     VTFLGLIDLFGRTGTFLLYAVLTLVAVAFTAALVPETKGRSLEEIEDALEGRLPPTGV
                     PVPVPVTVTNARRETVQ"
     gene            2265..3410
                     /gene="tal"
                     /locus_tag="VHX39_14720"
     CDS             2265..3410
                     /gene="tal"
                     /locus_tag="VHX39_14720"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF002881.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEX3992421.1"
                     /translation="MSTSSLMQEQRSAASPADGAINAPGKLHRLGQSLWLDNITRDLL
                     DSGTLQHYIDELSVTGLTSNPTIFDHAISHSATYDDPIRRGVRAGRSGEDLFFDLALD
                     DLTRAADLFRPIFERTGGVDGWVSLEVSPLLAHDTPSTLAAAKALHERAARPNLFIKI
                     PGTPEGLPAIEEATYAGVPVNVTLLFSREQYLAAAEAWLRGIERRIASGLNPVVGSVA
                     SVFISRWDVAVTGKVPEALADRLGIAIAQRIYRAYQELLGSPRWQRAANAGARAQRLL
                     WASTGTKDPKASDILYVKALAAPFTVDTMPEATLKDFADHGEVGDIMPADGGDVEAVL
                     GSFAKAGVDIDALASRLQDEGAKSFVESWTDLMSRIKVKSAATQRAG"
     gene            3467..5095
                     /gene="pgi"
                     /locus_tag="VHX39_14725"
     CDS             3467..5095
                     /gene="pgi"
                     /locus_tag="VHX39_14725"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEX3992422.1"
                     /translation="MTVNQQSTWNSLKDHQTKIEGLHLRQMFADDPGRGERLTAEAVG
                     IYLDYSKNRVTDETMRLLVQLAEQSGLRERIDAMFSGEKINVSEGRAVLHVALRAPRD
                     ASISVDGKNVVPDVHAVLDKMAGFANRVRGGDWKGHTGKRIRNVINIGIGGSDLGPVM
                     AYEALKHYCERSMTFRFVSNVDGTDFAEAVQDLSAEETLFIISSKTFTTLETMTNAHT
                     ARSWLLDGLGRDPKAIAKHCVAVSTNADEVAAFGIDTHNMFGFWDWVGGRYSMDSAIG
                     LSTMIAIGPDNFSAMLDGFHQMDEHFRTTPFARNLPVLMGLLSLWYNDFFKAQTVAVL
                     PYEQYLKRFPAYLQQLTMESNGKHVTLDGTRVEQDTGPIYWGEPGTNGQHSFYQLIHQ
                     GTRLIPCDFIGFAQTLNPLGQHHDILVANVFAQTEALAFGKTAEEVKAEGTPDWLVPH
                     RLFEGNRPSNTLLLDRLTPAALGKLVALYEHSVFTQGVIWRIDSFDQWGVELGKALAQ
                     RIVPQLESPTEPRLEHDSSTNNLIRRYRKSKGTV"
     gene            5095..6024
                     /locus_tag="VHX39_14730"
     CDS             5095..6024
                     /locus_tag="VHX39_14730"
                     /inference="COORDINATES: protein motif:HMM:NF021389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2090 domain-containing protein"
                     /protein_id="HEX3992423.1"
                     /translation="MPRGYQRDLYFQPFDHRASFQSNMFGWKGTLSEAQTAEIAAAKR
                     VIYDGFKSAIAGGAPREKAGILTDEQFGAAILRDAKADGFVTACCTEKSGQEEFAFEY
                     GEDFTRHIEAFGPTFAKVLVRYNPEGNRALNQAQAANLQRLSDYLTERNASRFLFELL
                     VPAEKAQLDKVHGDKKAYDVELRPGLMVQAIQELQAAGVEPDIWKVEGLDRREDCQKI
                     VTAARAGGRDMVGCIILGRGENEAKVTEWLGVAASVPGFIGFAVGRTVFWQPLVDMRA
                     GKITREQAVAAISGRYREYVDIFEKSGSVTEAA"
     gene            6049..>6397
                     /locus_tag="VHX39_14735"
     CDS             6049..>6397
                     /locus_tag="VHX39_14735"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX3992424.1"
                     /translation="MIGLGRMGANMVRRLLRSGHQCVVFDRSTKAIDELVGEKATGSG
                     SLADMVGKLTKPRAIWMMVPAAAVDETIADLLPLLSAGDILIDGGNSYYIDDIRRSKE
                     LASKGIHYVEAGTS"
BASE COUNT         1285 a         1933 c         2067 g         1112 t
ORIGIN      
        1 accggcaaca ggtggtcgcc gaacaggttg ctgtcgttgg cgcctgaccg gttgaccatg
       61 atcaggtggg aggaaagccc ggtgaccccg gccaggcgtt gccaatccac gtcggcagtg
      121 aaagcaacct ggttggcgaa ggtggagcct tgcttcgtgc cgccgctgac gttgccggcg
      181 aactccgtta atgcgtcgag ccccagatat atgccgtcgt tctccagcct ggtacgcagc
      241 ccgccccagt cgccgaacag gtgctcggtg gacggcccga cgcctggctg tggcggagac
      301 tgcggggcgg gtaagtcaac gctcgcaagc ggctcggtaa tattgagctg cgcgctggct
      361 ggcagcgcaa ccgccgccag cagacccgcg agtatcgcga cacggttcac tgcacggttt
      421 cccgacgggc gttcgtcacg gtgaccggca ccggcacagg gacgcccgtc ggcggaagcc
      481 ggccttccaa cgcgtcctcg atttcctcaa ggctgcgccc cttcgtctcc ggcaccaggg
      541 cagccgtgaa ggcgactgcg accagcgtca gtacggcata gagcaggaac gtcccggtac
      601 ggccgaacag gtcgatcaag cccaggaagg tgaccgtcac gacgaggttg aagccccagt
      661 tggagatggt cgcgaggctc atggcccgcc cgcgcactgc gagcgggaag atctcggcga
      721 tcagcagcca gaacaccggt cccaacccga ccgcgaagaa cgccacgtag gcggcgaccg
      781 acagcacggt gatccaggcc aatgcccctg aggtgcctag tgcaaatccg ccggccagga
      841 tcatcagggt cgccgccatg ccacccaggc tccacaacag caatgcacgg cgcccggcac
      901 ggtcgatcag ccacatcgag acaatggtca gcagcacgtt gacggcgccc acgccggcgg
      961 tcgccagaat ggacaccgag gccgatgaca gacccgcggc ctggaaaatc tgcggcgcga
     1021 aataaatcac cgtgttgatg ccggtgacct gttggaacat ggcaagcccg atgccgacaa
     1081 tcagcgcagg ccgcagacgc ggggccagca gcgccgacca cgggaccaac cggccgccct
     1141 cgcgcttcag atcggtgcgc agggtggcga gttcgtctgc cacttcggcc ggcgacgcgc
     1201 gcagccggcg cagcactgcc tcggcctggg gcatgcgatt atgcccggcc agccagcgcg
     1261 ggctttccgg caataccagc atgccaagtg ccaggatcgc acccggcacc gcacccaggc
     1321 ccagcatcca gcgccagccc tcggaggcgt cggcgaaggc gtagccaatc agataggaca
     1381 ccaggatgcc cagagtgatg caaagctgat tgagcgaggt caccgccccg cgtgaggcag
     1441 ccggggcgat ttcggccaga tacaaaggcg tcagcatcga cgccaccccg atcgcgatgc
     1501 caatcagcag ccgtcctgcc agtagcactg gaacgccgtc ggcgcttgcc gaaagcaagg
     1561 caccgatcac gaacgccaga gcggtgacca ggatcacgag ccggcgtccg aagcgatctg
     1621 acaggctgcc ggccaccgac gccccgagca ccgcgcccac gaggacaatg cccgcgacga
     1681 tgctctggcc ggcggtcgag agatgaaaca ccgtgcgtac gaacagcagt gcgctggaga
     1741 tcacgccggt gtcgtaaccg aaaagcagcc cgccgagggc ggcggtgatg gcgatcaaga
     1801 ggaattgcat tagctttctc ccatggcggc aaatggtcgc gcaggcggtg gtggggttca
     1861 gacggatcgg ccgatggtat agcggaaaat gccggatcgc cgccgatggt tgcggcgaag
     1921 cgctttgatg attggtctcc taccctggat ggccgactgt tactttgccg aactcaatgt
     1981 gcgaccgcct ggttcgacca cgccaggacg gcagcggaca tgggaaccgg attacccccg
     2041 gtattggatg ccggcgcgat tttttggatg ttctgcggcc atttcgcggt tcgcacgcgc
     2101 cggagccggg atcgcaatcc cgccttcaac cgcgttgcgg aagagtgtct gccgaacggc
     2161 gaatatttat ccgctactga ccggcatcaa attaagcgcc gggcgtcggc agcacgcggc
     2221 ccgctcgacc atcgattaac cagcccatag aggataaaat cgccatgagc accagttctc
     2281 tgatgcaaga gcagcgtagt gcagcctcgc ccgcagatgg cgcgatcaac gcccctggaa
     2341 aacttcatcg gttgggccag agtctttggc tcgacaatat cacacgggat ttgctggata
     2401 gcgggacgct gcagcattac attgatgaac tctccgtaac cgggcttacc tccaatccga
     2461 cgattttcga tcacgcgatc agtcacagtg ccacgtacga cgatccgatc cgccgcgggg
     2521 tgcgggcggg ccgttccgga gaagatctgt ttttcgatct ggcgctggac gatctgaccc
     2581 gggccgccga cctgttcagg ccgattttcg agcgcaccgg cggcgttgac ggatgggtct
     2641 cgctggaagt gtcgccattg ctggcccatg acacgcccag taccctggcc gcggccaaag
     2701 cgctgcatga gcgggccgcg cgaccgaacc tgttcatcaa aattcccggc acaccggaag
     2761 ggttgccggc gatcgaagag gccacttacg ccggtgtgcc ggtcaacgtc acgctgctgt
     2821 tctcgcggga gcaatacctg gcggcagccg aggcctggct gcgcggcatc gagcggcgta
     2881 tcgcctccgg gctcaatccg gtcgtgggat cggtggcttc ggtgttcatc agccggtggg
     2941 atgttgcggt taccggcaag gtacccgagg cgctggccga ccgcctgggt attgccatag
     3001 cccaacgcat ctatcgggcg taccaggagc tgcttggctc gccgcgctgg caacgggcgg
     3061 cgaatgccgg ggctcgtgcg cagaggctgc tgtgggccag caccgggaca aaggatccga
     3121 aggcgtccga tattctctac gtcaaagcgc ttgccgcgcc gttcacggtc gacaccatgc
     3181 ccgaggccac cctcaaggac ttcgccgatc acggtgaggt cggcgacatc atgccggccg
     3241 atggcggcga cgtggaggcg gtgctcggca gctttgccaa ggccggtgtc gacatcgacg
     3301 cgctggcgag ccggctgcag gatgaggggg cgaaatcctt tgtcgagtcc tggaccgatc
     3361 tgatgtctcg catcaaagtg aaaagcgcgg cgacgcagcg agccggatga gcgcaggcgg
     3421 caacggctcc gcgagaccgg ggatcacttt atcagggacc tgaccgatga ccgtgaacca
     3481 gcagtccacc tggaattctc tcaaggacca ccagaccaag atcgagggcc tccatctccg
     3541 gcaaatgttc gccgatgacc cgggccgcgg tgaacggctg accgcagagg ccgtcgggat
     3601 atatctcgat tattcaaaaa accgggtcac tgacgaaacg atgcggctgc tggtgcaact
     3661 ggccgagcaa tcgggtttgc gtgagcgcat cgacgccatg ttcagcggcg aaaaaatcaa
     3721 tgtttccgag gggcgcgcgg tgctccatgt cgcattgcgc gcgccacgcg atgcctcgat
     3781 ttccgtcgat ggcaagaacg tggtgcccga cgtgcacgcg gtgctggaca agatggccgg
     3841 cttcgccaac cgcgtccggg gcggcgattg gaaaggccac accggcaagc ggatccgcaa
     3901 cgtgatcaat atcggcatcg gcgggtccga cctgggtccc gtcatggcct acgaggcgtt
     3961 gaagcattac tgcgagcgaa gcatgacgtt ccgcttcgtc tccaacgtcg acgggaccga
     4021 cttcgccgag gcagtgcagg atctgagtgc cgaggagacg ctgttcatta tctcctcgaa
     4081 aaccttcacc acgctggaga cgatgaccaa cgcgcatacc gctcgctcgt ggctgctgga
     4141 cgggctgggg cgcgatccca aggcgattgc caaacattgc gttgccgttt caaccaatgc
     4201 cgatgaggtc gcggcgttcg gcatcgacac gcataacatg ttcggcttct gggactgggt
     4261 gggtggccga tattccatgg actcggccat cggcctgtcg accatgatcg ccatcgggcc
     4321 ggataatttc agcgccatgc tggacggctt ccaccagatg gacgagcatt tccgcaccac
     4381 cccgttcgcc cgcaatcttc ccgtgctgat gggccttctg tcgctctggt acaatgattt
     4441 cttcaaagcg cagaccgtcg ccgtgctgcc ttacgaacaa tacctgaagc gcttcccggc
     4501 ctatctccag caactgacaa tggagagcaa cggcaagcat gtgacgctgg acggcactcg
     4561 ggtggagcag gacaccggcc cgatttattg gggcgagccg ggtaccaacg ggcagcactc
     4621 gttctatcag cttattcacc agggcacccg gctgatcccc tgtgacttca tcgggttcgc
     4681 ccagacgctc aatccgctgg ggcagcatca tgacattctg gtggcaaatg tctttgcgca
     4741 aaccgaggca ctggcattcg gcaagaccgc cgaagaagta aaggccgagg gaacaccgga
     4801 ttggctggtg ccgcaccggc tgttcgaagg caaccggccg tcgaatacct tgttgcttga
     4861 tcgactgacg ccggctgcgc tgggcaagct tgtggcgctg tacgagcaca gcgttttcac
     4921 tcagggcgtc atctggcgca tcgattcctt cgaccaatgg ggcgtcgaac taggcaaggc
     4981 cctcgcgcag cgcattgtcc cgcaactcga gagcccgacg gaacccagac tcgagcatga
     5041 cagttcaacc aacaatctga tccggcgtta tcgcaagtcg aaaggaaccg tgtgatgcca
     5101 cgaggatacc agcgcgacct gtactttcag ccgttcgacc accgcgcctc ctttcagagc
     5161 aacatgttcg gctggaaggg gacgttgagc gaggcgcaga cggcagagat cgccgccgcc
     5221 aaacgggtga tttatgacgg tttcaagtcg gcgatcgcgg gcggtgcgcc cagggaaaag
     5281 gcggggatcc tgacggatga gcagttcggc gcggcgattt tgcgggatgc caaggctgat
     5341 ggcttcgtca ccgcctgttg tacggaaaag agcgggcagg aggaattcgc gttcgaatat
     5401 ggcgaggatt tcactcgcca catcgaggct tttggtccga ccttcgccaa ggtcctggtg
     5461 cgctataatc cggagggtaa ccgcgctctg aaccaggcgc aggcggcgaa tttgcagcgc
     5521 ctgtccgact atctgaccga aaggaacgca agtcgtttcc tgtttgagct gttggtgccg
     5581 gcggaaaagg cacaattgga caaagtgcac ggcgacaaga aggcgtatga tgtcgagttg
     5641 cggcccggtt tgatggttca ggcgatccag gaactccagg cggccggtgt cgagccggat
     5701 atctggaagg tcgaaggcct cgaccggcgg gaggattgtc agaagattgt caccgctgcg
     5761 cgggccggtg ggcgcgatat ggttggctgc atcatcctcg gccgcggtga gaatgaagcc
     5821 aaggtgaccg aatggctcgg cgtggcggcc tcggtgccgg gatttatcgg atttgccgtc
     5881 ggccgcaccg tgttctggca accgctggta gacatgcgag cgggcaaaat aacgcgggaa
     5941 caagcggttg ccgcaatctc ggggcggtat cgcgaatatg tcgacatctt cgagaaatcc
     6001 ggatctgtga ccgaagcagc gtgaaaggat cagcctgtgc agttaggaat gatcggcctc
     6061 ggccggatgg gagcgaatat ggtgcgccgc ctgttgcgga gcgggcatca gtgcgtggtg
     6121 tttgacaggt cgacgaaggc gatcgacgaa ctggtcggcg aaaaggcgac cggaagtggt
     6181 tcgctggccg acatggtcgg caaactgacc aaaccaaggg caatctggat gatggttccg
     6241 gccgccgctg tcgacgaaac cattgctgat ctgttgccct tgctctcggc gggcgacatt
     6301 ttgatcgatg gcggcaattc gtactacatc gacgatattc gtcgctcgaa agagctggcg
     6361 tcgaaaggca tccattacgt cgaagcgggc acctccg
//
LOCUS       DATAVD010000769         1936 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_819839, whole genome shotgun sequence.
ACCESSION   DATAVD010000769 DATAVD010000000
VERSION     DATAVD010000769.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1936
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_819839"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..1221
                     /locus_tag="VHX39_14740"
     CDS             136..1221
                     /locus_tag="VHX39_14740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992425.1"
                     /translation="MTDQAIPKAVESVLDIARWAPSGDNAQPWTFRVKGDRDVEVLIR
                     RTSPNIYEYRHGEPTLVSTGALLENMEIAAQAFGLKASWRYAGSADGIDHIALHFSDD
                     DPVSKPDLFGEITRRSVDRRPFRMHPLSAEQKSRLSAALNPEMQVQWYDSLSDRRRIA
                     ALSAMATNIRLTIPETFAVHRSIVDWENRESEHAIPSRALGLDPLTLRLTRWSMAKWS
                     RTKFMNAIGAPYFASLQMDLVPGLFCASYFVIRLKRRSGDPDAALVETIHAGQAIQRL
                     WLTATKLGLVIQPCIAILAFWSYAAAGQEFTVLKKAQRAAGGLAIGAEAMFGKNDGIV
                     FLARIGWPRSGSHSRSIRLPLSRLFER"
     gene            1438..>1936
                     /locus_tag="VHX39_14745"
     CDS             1438..>1936
                     /locus_tag="VHX39_14745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992426.1"
                     /translation="MKAMKSALIATSVGAVLAVLGASAAAADPINFTWTPSAVGLAGG
                     AIVGANNFNVTDFATITVTNAAGDFTENGALNVSGFLNGGSPVTASGLDTTGGYSLYY
                     VFSGTGNQGGPTPTVVGTSVTGDYSSLSYTLYASTTAHPTFTVGAGGVVVAAPGSFAL
                     ATGSLV"
BASE COUNT          398 a          552 c          576 g          410 t
ORIGIN      
        1 catatcacta tcacttcgac gcctacctca acagattccg gacattccgc agtcctggaa
       61 acaatggatt tctgcagcgg atgaagggcg atgccgtgga gcgtcaaatc aagacgcaaa
      121 tggggctcgc aaacgatgac agatcaggcc attccaaagg cggttgagtc ggtcctggac
      181 attgcgcgct gggctcccag tggcgacaat gcgcagcctt ggacgtttcg cgtcaaaggt
      241 gaccgcgacg ttgaggttct tatccggcgc acaagcccca atatttatga atatcggcac
      301 ggcgagccca ctcttgtctc gactggtgcg ctgctcgaaa acatggaaat cgccgcgcag
      361 gcgttcggtc tgaaggcaag ttggcgttat gccggctcag cggacggcat agaccatatc
      421 gccttgcatt tttctgatga cgatccagtt tctaaacctg atcttttcgg cgaaatcaca
      481 cggcgttccg ttgatcgacg cccattcagg atgcatcccc tcagtgcaga acaaaagagc
      541 cggctgtctg cagcgttgaa cccggaaatg caggtacagt ggtacgatag cctgtcggac
      601 cgtcgtagaa ttgcggcact cagcgcaatg gccacgaata ttcggcttac gattccggag
      661 acctttgcgg tccaccgcag tatcgtggat tgggaaaacc gcgaaagcga gcatgcgatc
      721 ccctcacgcg ccctgggtct ggacccgctg actttgcggc tcacgcgctg gtcgatggcg
      781 aaatggagcc gcacaaaatt catgaacgcc atcggagcac cctatttcgc ctccctgcag
      841 atggatctcg tgccgggatt gttctgcgcc tcctattttg tcattcgcct caagcggcgg
      901 tccggcgacc cggacgctgc cctggtagag acgattcacg cggggcaggc catccagcgg
      961 ctctggctta ccgcgacaaa gctaggattg gtaatacaac cctgcattgc aattctggct
     1021 ttctggtcct atgccgcggc cgggcaggag ttcacggtgc tcaaaaaggc ccagcgcgcg
     1081 gcgggggggc tcgccatcgg cgccgaggcc atgttcggca agaatgatgg catcgttttt
     1141 ctggcgcgga tcggctggcc ccgcagtggc tctcatagcc gctccataag gctgcccttg
     1201 tctcgcctgt tcgagcgata gctgcgaggc ttggttaata tttacgggca gtccccccgc
     1261 tggccgatat tttgtaaatt gcgcttacac caaaaggcga atatggcgaa ctcaccattg
     1321 attctaaagg aaaaatcagt ctggcaccga tcttgctttt aactcagcca agcgagactt
     1381 ccgggccaag ggatggccag tcagctggtg gtttataaca ggacgatgga gagaaatatg
     1441 aaggcgatga aaagtgcact gatcgcaacg agcgtcgggg cagtattggc ggtgctgggc
     1501 gcgagtgctg cggcagccga tccgatcaat tttacctgga caccgtcagc cgtcggtttg
     1561 gctggcgggg cgatcgttgg ggcgaacaac ttcaacgtca ctgacttcgc caccatcacg
     1621 gtgaccaatg ccgcgggcga cttcaccgag aatggggcgc tgaacgttag cggcttcctc
     1681 aacggtggca gcccggtgac ggcgagtggc ctggatacga cgggcggtta cagcctctat
     1741 tatgtcttta gcggtactgg taatcagggc ggcccgaccc cgaccgttgt gggcaccagc
     1801 gtcacgggcg actacagcag cctcagctat acgctgtatg ctagcactac tgcgcacccg
     1861 accttcacag tcggcgcggg tggcgtggtg gttgcagcgc ctggctcgtt cgcccttgcc
     1921 accggctcgc tggtgg
//
LOCUS       DATAVD010000770         2170 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2304099, whole genome shotgun sequence.
ACCESSION   DATAVD010000770 DATAVD010000000
VERSION     DATAVD010000770.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2304099"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..480)
                     /locus_tag="VHX39_14750"
     CDS             complement(<1..480)
                     /locus_tag="VHX39_14750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEX3992427.1"
                     /translation="MAFSPDSRVYPNRSATTTAVLDAGLRAYMLRVYNWMASGLLLTG
                     IVAYAIAHTGAIDAFFPLMQTASGRLVRAPTALAYIAMLAPLGFVLVLSFGVNRLSTS
                     TVQALFWAFCAAMGASLTSIFVVYTGASIVEVFFITAATFAATSLYGYSTNTDLSRMG
                     "
     gene            complement(684..>2170)
                     /locus_tag="VHX39_14755"
     CDS             complement(684..>2170)
                     /locus_tag="VHX39_14755"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX3992428.1"
                     /translation="ALAALYPGPLMLAACYGLLTALCFALWPLGRAVRIPGAALFRDL
                     IVAEHATPQAFVIIANGLAAIGLIAVTIATAADRRFAVYFCAGALATLALFRIAAFCV
                     MWISRLAPISKSPPVRLGVANLHQPGAATPLLMLSVGLGLATLATVAQIQNTIRGQIL
                     DQMPAAAPTFFFVDIQNDQMDRFRALANAVPGVSEIRDVPSLRARVVAIKGIPVEQAN
                     VTPDSAWALKGDRGLTYAATPPEHTRLVAGHWWPADYNGPELVSVDAGLAKGWHVAIG
                     DTIRVNVLGRDLDLHVASLRDIAWQRLSINFFMVASPGLLSQAPHTHIATVRVDPAHE
                     AALLRSVTDGLPNVTGIRVADILAAVAALLNQIAGALAATGMLTLLAGLLVLVSAVAA
                     GQRRRTREAIILRVLGFTSRQIRAAWLVEFALTGLAAGLIAALTAAGASYGVAHYILH
                     APWGFSWRILIFTLAGGLATMLVFGYAGLTATVRARPAQLLRNE"
BASE COUNT          441 a          690 c          711 g          328 t
ORIGIN      
        1 gcccatccgg ctgaggtcag tattcgtcga gtagccatag aggcttgtcg cagcgaaggt
       61 cgcggcagtg atgaagaaca cctcgacgat cgaagccccg gtgtagacca cgaagatgct
      121 ggtcaggctg gcacccattg ccgcgcagaa cgcccagaac agcgcctgca ccgtgctggt
      181 cgacagccgg ttcaccccga agctcaacac caacacaaag cccagaggtg ccagcatcgc
      241 aatgtatgcg agagcggtcg gcgcccgcac cagacggccc gatgcggttt gcatcagtgg
      301 gaagaacgcg tcgatcgctc cggtatgggc gatcgcatag gccacgatcc cggtcagcaa
      361 cagtcccgac gccatccagt tgtagacgcg gagcatgtag gcccggaggc ccgcgtccag
      421 tacggcggtc gtcgtcgctg accgattggg atagacccgt gagtcgggac taaaagccat
      481 ggtaccctgt ttcctttcgg cgttatgcca gtcgccctct cattttggag atcgacccgc
      541 gctattcaag acgggaaccc ctccggacct gggcgaaatt gtggcccgga tcaggcgagg
      601 ctcgggggtg tcgacgtttc ggttctccaa cactggggcg atttcaggcg gtcaatccag
      661 tcgtcgccac gtgcgtccgg tggctactcg ttccgcagca actgcgccgg gcgagcacgc
      721 acggtggcgg tcagcccagc atagccgaag acaagcattg tcgcgagtcc tcccgcaaga
      781 gtgaaaatga ggattcgcca cgagaaaccc caaggcgcat gtaaaatata gtgagccacc
      841 ccataactgg cgcccgctgc agtcagcgca gcaatcaaac cggcggcgag cccggtcagg
      901 gcgaactcga ccagccacgc ggcgcggatc tgccggctgg tgaagccgag cacgcgcagg
      961 atgatagcct cgcgggtgcg gcggcgctga ccggcggcga ccgcgctgac cagtaccagc
     1021 aaaccggcca gcagagtcag catgccggtc gcggccaagg cgccggcgat ttgattgagc
     1081 aatgccgcaa ccgccgccag gatatcggcg actcttatgc ccgtgacatt cggtagcccg
     1141 tcggtcaccg aacgcagcag cgccgcttcg tgcgccgggt cgacccgcac ggtggcaata
     1201 tgcgtgtgcg gtgcctgcga caacaggccc ggactggcca ccatgaagaa gttgatcgac
     1261 aggcgctgcc aggcgatgtc gcgcaggctc gcgacgtgca gatcgaggtc ccggccaagc
     1321 acgttgaccc tgatcgtgtc gccgatcgcc acatgccatc ccttggcgag gccggcatcg
     1381 accgacacca gttcggggcc gttataatct gcgggccacc agtggccggc gaccagcctg
     1441 gtgtgctccg gcggcgtcgc ggcataggtc agtccgcgat cgcccttcaa agcccaggcg
     1501 gagtcgggtg tgacgttggc ttgctcgacg gggatgcctt tgatggcaac cacccgggcg
     1561 cgtagcgagg gaacgtcgcg gatttcgctc accccgggga ccgcgttggc cagggcgcgg
     1621 aaccggtcca tctggtcgtt ctgaatgtcg acaaaaaaga aagtgggcgc cgcggcgggc
     1681 atctggtcca ggatttggcc ccgaatggtg ttctggattt gcgcgactgt cgccagcgtt
     1741 gccagcccaa gcccaaccga gagcatcagc aacggagtgg cagcccccgg ctggtgcagg
     1801 ttggcaacgc cgagacggac cggtggactt ttcgaaatcg gagccaaccg cgagatccac
     1861 atcacgcaaa acgccgctat ccggaacaag gccagagtgg ccagcgcgcc ggcgcagaaa
     1921 tacaccgcga accgccgatc ggctgccgtg gcgatggtca ccgcgatcaa cccgatagcc
     1981 gccaacccgt tggcaatgat gacgaacgcc tgaggcgtcg catgctccgc cacgatcagg
     2041 tcacggaaca gggccgcgcc ggggatgcgc acggcgcggc ccaacggcca gagagcgaaa
     2101 caaagcgctg tcagcaggcc gtagcaggcg gcgagcatca atggcccagg atagagtgcg
     2161 gcgagcgcag
//
LOCUS       DATAVD010000771         3861 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1934209, whole genome shotgun sequence.
ACCESSION   DATAVD010000771 DATAVD010000000
VERSION     DATAVD010000771.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3861
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1934209"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VHX39_14760"
     CDS             complement(<1..184)
                     /locus_tag="VHX39_14760"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmG family class I SAM-dependent
                     methyltransferase"
                     /protein_id="HEX3992429.1"
                     /translation="MTSSEAKLRAFAALLLRWNATLNLIAARDAATLWDRHIADSLQL
                     IPLMPGGTPRAIDLGSG"
     gene            complement(181..1347)
                     /gene="dmeF"
                     /locus_tag="VHX39_14765"
     CDS             complement(181..1347)
                     /gene="dmeF"
                     /locus_tag="VHX39_14765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family Co(II)/Ni(II) efflux transporter
                     DmeF"
                     /protein_id="HEX3992430.1"
                     /translation="MEPHSHVFLGEGHEHAENRTWAVIWLCATMMALEIVGGLLFGSI
                     ALVADGLHMSTHAGALLLAAMAYRYARRHATDARFTFGTGKLGDLAGFTSAIVLAMIA
                     LLIGWEAVSRFLTPVPIAFGEAIPIACLGLIVNIVSAWLLGSGHHHHHHHGHDDARTL
                     DLDGKKLTLEIREDGVPPRFWIREPVAPDTVWAETIRPDGVRQRFVFTQLAGGLESVE
                     EIPEPHAFTVDLHLGEAKASVVYEEHDHAGTHRDNNMRAAIIHVMADAAVSVLVIVGL
                     LLARTFGWLWMDPLAGIVGACVIASWAYGLVRDTGRILLDMNPDRVLTERLRQEIETD
                     GDKLTDLHVWRLGPGHLGAVLSVVTGKQRGPEDYHERLRHFASLSHITVEVQPR"
     gene            complement(1357..1635)
                     /locus_tag="VHX39_14770"
     CDS             complement(1357..1635)
                     /locus_tag="VHX39_14770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal/formaldehyde-sensitive transcriptional
                     repressor"
                     /protein_id="HEX3992431.1"
                     /translation="MTHTIREKQKLLARVRRLRGQIEAIERALESESGCEQVMHLIAG
                     ARGAMAGLMAEVVEDHVRTHLVDAETHPAALNPDAVEQLLDVVRTYLK"
     gene            1825..2670
                     /locus_tag="VHX39_14775"
     CDS             1825..2670
                     /locus_tag="VHX39_14775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992432.1"
                     /translation="MSTSLKMQPVHPSFAGATLLDQIELRHGPIALLGRFFLLAEQAA
                     RDRGVYLRLHTDMASLAEIYPEVMPGRRFPVLPIFDPAHSDLSPDNAFWISGHDESGA
                     VVATQAARIFNMAQSTVEREFESLRPFFATPEKHLAAGMRCHVECPPANGITGQVVYS
                     GCAIYHPKVRGCGVSRILPRISRALAHSMWKSDYTISLVENVLVEKKVHISYGYTNHS
                     KSIKLRGTNRGDVDFELVWMPTSEMLEDLGSYTSEIVGNEVRNTETTDTNWVEPRRQG
                     NSSRS"
     gene            complement(2571..3434)
                     /locus_tag="VHX39_14780"
     CDS             complement(2571..3434)
                     /locus_tag="VHX39_14780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992433.1"
                     /translation="MQAGLDLIVDDSGHVWRTGSRALLDSLSVAGLQRDLTQYLIRNL
                     GFVRLHTTRSGVRITLRPRFLTKAAFEALVFQMVTLEQERFVIEIIDAPGVIEIIPGV
                     DDAAARLADLASVGGNITREDFHREEMSFHRLRGNPRLAPLGNLLRRWRRSHGKLRTD
                     LVTEFGDPALLGRATVMRMTGDTGGVIEYVGEGFTWADTSWRNAMVGHDASGQPDPRY
                     GENFWAGYLETQRSQTPRLEFIEAVIRVPGYPARRSRYERLLLPWRRGSTQFVSVVSV
                     LRTSFPTISDV"
     gene            complement(3443..>3861)
                     /locus_tag="VHX39_14785"
     CDS             complement(3443..>3861)
                     /locus_tag="VHX39_14785"
                     /inference="COORDINATES: protein motif:HMM:NF024252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX3992434.1"
                     /translation="CPQPSDLPAPDDGVDSINLHVCQRMKTKRILRDMSQERLAKALG
                     VSYQQLQRYESGKSRLSCSMLYRAALALDVPITYFFETILADRAGNAGAGEQGLDKAA
                     LLAVRNIQNLPGGDMRQSLLNLIADLARTPKTGKRS"
BASE COUNT          718 a         1173 c         1275 g          695 t
ORIGIN      
        1 cgccggagcc cagatcgatc gctcgcggcg tgccgccagg catcagcggg atgagttgca
       61 gtgagtccgc gatgtggcga tcccacaagg tggcggcgtc gcgcgcggcg atcagattca
      121 acgtggcatt ccagcgcagc agcagggcgg cgaatgcgcg tagttttgcc tcggaggagg
      181 tcaacggggc tggacttcca cagtgatgtg cgacagcgag gcgaagtgcc gcagacgttc
      241 gtggtagtcc tccggcccgc gctgcttgcc ggtcacgacg gacagaaccg cgcccagatg
      301 cccgggaccc agccgccaga cgtgcaggtc ggtcagtttg tcgccatcgg tctcgatttc
      361 ctgccgcagc cgttcggtca gcacgcgatc cgggttcatg tcgagcagga tacggccggt
      421 gtcgcgcacc aggccatagg cccagcttgc gatgacgcag gcgccgacaa tgcccgccag
      481 cgggtccatc catagccagc cgaaagtgcg ggcgagcagc aggcccacga tcaccagaac
      541 cgacaccgcc gcatcggcca tgacatggat gatcgcggcc cgcatattgt tgtcgcgatg
      601 cgtgccggcg tggtcgtgtt cctcgtagac aaccgacgcc ttggcctcgc cgagatgaag
      661 atcgacggtg aaggcatgcg gttcggggat ttcctcgacg ctttccagac cgccggcaag
      721 ttgagtgaac acgaagcgct gacggacgcc gtcggggcgg atggtttcgg cccatacggt
      781 gtccggggcg accggttcgc ggatccagaa gcggggcggg acgccgtcct cgcggatttc
      841 cagcgtcagc tttttgccgt ccaggtcgag cgtgcgcgcg tcgtcatggc catggtgatg
      901 atggtggtgg tgcccggaac ccagcagcca ggcgctgacg atgttcacga tcaggccaag
      961 gcaggcgatg gggatcgcct cgccaaaagc gatcggcacc ggggtgagga agcggctgac
     1021 cgcctcccag ccgatcagca gcgcgatcat ggccagcacg atggcgctgg tgaagccggc
     1081 gagatcaccg agcttgccgg tgccgaaggt gaaccgcgca tcggtggcgt ggcggcgggc
     1141 atagcggtag gccatcgcgg cgagcaggag ggcaccggca tgtgtgctca tgtgcaggcc
     1201 gtcggcgacc agggcgatgg agccgaacag caacccgccc acgatttcca gcgccatcat
     1261 cgtcgcacag agccagatga cggcccaggt gcggttttcc gcgtgttcgt gaccttcgcc
     1321 gaggaagacg tggctatgcg gttccatgcc gggtcctcat ttcagatagg tacgaacgac
     1381 atcgagcaat tgttcgacgg cgtccgggtt cagcgcggcg gggtgggttt cggcatcgac
     1441 gagatgggtg cggacgtggt cctcgacgac ctccgccatg aggccggcca tcgcgccgcg
     1501 ggcgccggcg atgaggtgca tgacctgttc gcagccggac tcgctctcca gggcgcgttc
     1561 gatggcctcg atctggccgc ggaggcggcg aacgcgggcc aggagcttct gcttttcccg
     1621 gatagtatga gtcatggata ggggggtacc ctattcggga ccatcgcgca acggtgctga
     1681 gtcccggccg tcggccagtc tcggcacccg cacgccggtt tcgttgaacg aggcaagcac
     1741 gacccgcgag accgtcctaa gatcagggtg cgccacacag atttgtcgga agtggcgtca
     1801 aacactgaca aggaaaaaag cacaatgtcg accagtctca aaatgcagcc agtacatccg
     1861 tctttcgcgg gggctaccct gctcgaccag atcgaactca ggcacgggcc gatcgcgtta
     1921 cttggccgct tcttcctgct cgccgagcag gctgcgcgcg accgcggggt ctacctgcgc
     1981 ttgcacacgg atatggcttc gctggcggag atctacccgg aggtcatgcc cggccgacgg
     2041 tttccagtac tgccgatctt cgatccggcg cacagcgacc tctctccgga taacgccttc
     2101 tggatttcgg gtcacgatga gtccggcgcg gtcgttgcta cacaggcggc ccgtatcttc
     2161 aatatggcgc aatcgacggt ggagcgggaa ttcgagtcgc tgcggccgtt tttcgcgacg
     2221 ccggagaagc atctggcggc cggcatgcga tgccacgtcg aatgcccacc cgcgaacggc
     2281 attacaggcc aagtggttta ctccggctgc gcgatctacc atccgaaggt caggggatgc
     2341 ggcgtttccc gcatcctgcc gcggatttcg cgtgcgctcg cccactccat gtggaagtca
     2401 gactacacga tcagcctggt ggaaaacgtg ctggtggaga agaaggtcca catctcttac
     2461 ggctatacca accacagcaa gtcgatcaag ctgcgtggca ccaatcgagg cgatgtggac
     2521 tttgagctgg tctggatgcc aacatccgaa atgttggagg atcttggcag ctatacgtcg
     2581 gaaatcgtcg ggaatgaggt gcgtaatacg gaaacgaccg acacgaactg ggtggaaccg
     2641 cggcgccagg gtaacagcag ccgttcgtag cggctgcggc gtgcgggata acccggcacc
     2701 ctgataaccg cttcgataaa ctcgaggcgc ggcgtctggg aacgctgcgt ctcgaggtat
     2761 ccagcccaga aattttcccc atatcgcggg tccggttgcc cgctcgcgtc atggccgacc
     2821 attgcattgc gccaggatgt gtcggcccag gtaaaaccct cgcccacata ttcgatgacg
     2881 cctcccgtat caccggtcat acgcatgaca gttgcgcggc caagcagtgc gggatcgcca
     2941 aactccgtga ccagatcggt ccgcagtttg ccatggctac gccgccatcg ccgaagcagg
     3001 ttcccgagcg gggccagccg cgggttgccg cgtaagcggt ggaacgacat ttcctcgcga
     3061 tgaaaatcct cacgtgtgat gttgccaccc acacttgcga ggtcagccag acgcgcggcc
     3121 gcgtcatcga cgcccggtat gatctcgatg acccccggag cgtcgatgat ctcaatgaca
     3181 aagcgttcct gttccagcgt gaccatctgg aagaccaggg cttcgaaggc cgccttggtc
     3241 aggaatcgcg ggcgcagggt gatgcggacg ccggaccggg tggtatggag ccgcacgaat
     3301 cccaggttgc ggatgaggta ttgggtcagg tcacgctgaa gccccgcgac actaaggctg
     3361 tccagcaacg cgcgtgagcc ggtccgccag acgtggccgc tgtcgtcgac gatgagatcg
     3421 agacctgctt gcacgggctg tcctaggacc gcttgccggt tttcggcgtg cgggcgaggt
     3481 cggcgatcag gttcaacaag gattggcgca tatcgccgcc tggtagattc tggatattcc
     3541 tgaccgccag cagtgcggcc ttgtccagcc cctgttcgcc agcgccggcg ttgccggctc
     3601 ggtcggccag aatggtctca aaaaaatacg taatgggtac gtccagcgcc agggcggcac
     3661 gatacagcat cgagcacgat agccggcttt tgccggattc atagcgttgt aattgctggt
     3721 aactgacgcc cagggccttg gccagccgct cctgcgacat atcgcgcagg atccgcttgg
     3781 tcttcatgcg ctggcaaaca tggaggttta tgctatccac gccgtcgtcg ggcgcgggca
     3841 ggtcagacgg ctgcgggcaa a
//
LOCUS       DATAVD010000772         3615 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3049589, whole genome shotgun sequence.
ACCESSION   DATAVD010000772 DATAVD010000000
VERSION     DATAVD010000772.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3615
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3049589"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(157..232)
                     /locus_tag="VHX39_14790"
     tRNA            complement(157..232)
                     /locus_tag="VHX39_14790"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(197..199),aa:Lys,seq:ttt)
     gene            complement(349..3495)
                     /locus_tag="VHX39_14795"
     CDS             complement(349..3495)
                     /locus_tag="VHX39_14795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002731109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3992435.1"
                     /translation="MSISEPFIRRPIATSLLMLGVLVFGIIAYTMLPVAALPQVDFPT
                     ITVTANYPGASPATMASSIATPLEQQFTAIPALDQMTSLSGTGTTTITLQFNLSRNID
                     GAAQDVQTAINAAGGLLPKDLPTPPTYRKVNPANFPVLIYAVHSDAVPVYRLDNYAYL
                     ILAQQLSTVPGVSQVSVFGQKQYAARIEINPAALAARGLGLEDVRTALLAATVNGPKG
                     SIEGMHQSTALDTNDQLFDAAQYGDVIIAYRHGAPVRIKDVGQAVNSVQNLYVGAWYN
                     NRPAEGIAIMRESGANTIALVDRIKALMPRLEQSIPPSVHVTLMSDRSLVTQAAVHDV
                     QITMLITIALVVLVIFIFLRTIWATIIPAMAVPLSLLATAGVMYAAGFSLDNISLMAL
                     TISVGFVVDDAIVMIENIVRYIEQGERPLRAALRGAGQIGFTIISITFSLIAVFIPLF
                     FMGGIIGRLFREFAVTVSVAVVASAVVSLTLTPVLCALFLKREEKHKANRLNRMAERV
                     FDRILATYDRGLRFVFRHQFMTLLTTLSLIVVTGFLYMSIPKGFFPQQDTGFIFGEVD
                     TRQDASFATTTAIARQIVDIVKQDPAVRGVLSLGGAYSYNPTENTARVYIQLKPFDER
                     DVTADQIIERLRPLVARVEGAKFFMQAGQDISIGGRLSRTQYQYTLTDTNLEELNHWA
                     PIIEQAMRKLPELQDVASDQQIAAPHVAIAIDRDAASRLGLSVSLIDQTLYDAFGQRQ
                     VTTIYTATNQYKVILEVAPAFRQDATALSKIYIPAPSGAQVPLSSVAHYTRTIEPLSV
                     SHQGEFPAITLSYNLAPGAALGQAVDSIQALTDRLNAPPTLNRAFQGTAQAFQASLSS
                     MPLLVAAAILVVYIVLGILYESYIHPITILSALPSAGVGALVMLMLLHYDLSVIAIIG
                     VILLIGIVKKNAIMMIDFALQAERRDGKEPREAIHEACLLRFRPIMMTTFAALFGSLP
                     IALGHGAGSELRRPLGIAIIGGLLVSQWLTLYTTPVVYLYLERFSRWIGRSHRLSHVA
                     EALSERPGVLVEDRQGAE"
BASE COUNT          656 a         1075 c         1256 g          628 t
ORIGIN      
        1 cgggtgctgc ggccgttagg cgtcgcgcga tatttaatgc cccgacggcc cgagatcgcc
       61 ctctgtgcgg gctgcaatga ccgttacgac acgccccatg tgtcacccac gacgtgtggt
      121 cggggatgga gccggcaact agactcttga tttatttggt gagcccggtg ggaatcgaac
      181 ccacgacccc aagattaaaa gtctcgtgct ctaccaactg agctacaggc tcgcccgcgc
      241 gctttgaacg ccatgcgggg ccgcgggtca agcttctacc cgcggcttcg cgtgtcaatt
      301 cgccaaccgg tgccgaaaca ccccatcatg ggtccagcgt cgcgcggact actcggcccc
      361 ttggcggtct tccaccagga cgcccggccg ctctgacagc gcttccgcca cgtgtgacag
      421 gcgatgggac cggccgatcc agcgactgaa ccgctcgaga tacaggtaga cgaccggggt
      481 cgtgtagagc gtcagccatt gcgacaccag cagcccgccg atgatcgcga tgcccagggg
      541 ccggcgcagt tcggagcccg cgccgtggcc cagggcgatc ggcaggctgc cgaacagggc
      601 ggcgaacgtc gtcatcatga tcgggcggaa ccgcagcagg caggcttcgt ggatcgcctc
      661 gcgcggttcc ttgccgtcgc gccgctctgc ctgcagtgcg aagtcgatca tcatgatcgc
      721 gttcttcttg acgatgccga tcagcaggat cacgccgatg atggcgatca ccgacaggtc
      781 gtagtgcagc agcatcagca tcaccaaggc gccgacgccg gccgagggca gcgcggacag
      841 gatggtgatc ggatggatat agctctcgta caggatgccc aacacgatat agaccaccag
      901 gatggccgcg gcgaccagca gcggcatcga ggacagcgag gcctggaacg cctgcgccgt
      961 gccttggaac gcccggttga gcgtgggcgg ggcattcagc cggtcggtca gtgcctggat
     1021 gctgtcgacc gcctgcccga gcgccgcgcc tggtgccagg ttgtaggaca gggttatggc
     1081 ggggaattcc ccctgatggc tgaccgatag cggctcgatg gtccgtgtgt agtgcgcgac
     1141 cgaactcagc ggcacctggg cgccggaggg cgctgggata tagatcttcg acagggccgt
     1201 ggcgtcctga cggaacgccg gcgccacttc gaggatgacc ttgtattggt tggtcgcggt
     1261 gtagatcgtg gtgacctggc gttgtccgaa cgcatcgtac agcgtctggt cgatcagcga
     1321 gacggacagc ccgaggcgtg aggcggcatc gcgatcgatg gcaatcgcga catgcggtgc
     1381 ggcgatctgc tgatcggagg cgacatcctg gagttcaggg agtttccgca tcgcctgttc
     1441 gatgatcggc gcccagtgat tgagttcctc caggttggtg tcggtcagcg tgtattggta
     1501 ctgggtgcgg ctcagccggc cgccgatgga gatgtcctgg ccggcctgca tgaagaactt
     1561 cgcgccttcc acacgcgcga cgaggggccg cagccgctcg atgatctggt cggcggtgac
     1621 atcgcgttcg tcgaagggtt tcaactggat gtagacgcgc gcggtattct cggtcgggtt
     1681 gtaggagtag gcgccgccca gagacagcac gccccggacc gccgggtcct gcttgacgat
     1741 gtcgacgatc tgccgcgcga tcgcggtggt cgtcgcgaag gaggcgtcct ggcgggtatc
     1801 cacctcgcca aagatgaagc cggtgtcctg ctggggaaag aagcccttcg ggatgctcat
     1861 atagaggaag ccggtcacga cgatcagcga cagggtcgtc agcagcgtca tgaactggtg
     1921 gcggaagacg aagcgcagac cgcgatcgta ggttgccagg atgcggtcga agacccgctc
     1981 cgccatccgg ttgagccggt tggccttatg cttctcctcc cgcttcagga acagcgcgca
     2041 caggacgggc gtcagcgtga gcgataccac ggccgatgcg acgacggcga cagacaccgt
     2101 gaccgcgaat tcgcggaaca gccggccgat gatgccgccc atgaagaaca gcggaatgaa
     2161 caccgcgatc agcgagaagg tgattgaaat gatggtgaag ccgatctgcc ccgcgccgcg
     2221 cagggccgcc cgcaacggac gctccccctg ttcgatgtag cgcacgatgt tttcgatcat
     2281 gacgatcgcg tcgtcgacca cgaaaccgac cgagatggtc agtgccatca aggagatgtt
     2341 gtccagactg aagccggcgg cgtacatgac gccggcggtg gcaagcagcg acagcgggac
     2401 cgccatggcg ggaatgatgg tggcccagat ggtccgcagg aagatgaaga tgacgaggac
     2461 caccaatgcg atggtgatca gcatcgtgat ctgcacgtca tgcaccgcgg cctgtgtcac
     2521 cagggagcga tcggacatca aggtgacatg caccgacggc gggatggatt gctccaggcg
     2581 cggcatcaaa gccttgatgc ggtccaccag ggcgatcgtg ttggccccgg attcgcgcat
     2641 gatcgcgatg ccctcggccg gccggttgtt gtaccaggcg ccgacgtaga ggttctgcac
     2701 cgagttgacg gcctggccga catccttgat ccgcaccggg gcaccatggc ggtacgcgat
     2761 gatcacgtcg ccatattggg cggcatcgaa caactggtcg ttggtatcca gcgcggtgga
     2821 ctggtgcatg ccctcgatcg agcccttcgg gccgttcacg gttgccgcca gcagggcggt
     2881 gcgaacgtct tccaggccga ggccacgggc ggcgagggcg gctggattga tctcgatacg
     2941 ggcggcatat tgcttctggc cgaacaccga cacctgggag acgccgggaa cggtcgacaa
     3001 ttgctgcgcc aggatcaggt aggcgtaatt gtcgagccgg tagaccggca ccgcatcgga
     3061 gtggaccgcg tagatcagca ccgggaagtt ggccgggttg accttcctgt aggtgggcgg
     3121 ggtcggcagg tccttgggca gcagaccgcc ggcagcgttg atcgcggtct gcacatcctg
     3181 cgcggcaccg tcgatgttgc gcgacaggtt gaactgcagg gtgatggtgg tcgtgccggt
     3241 gccgctgagc gacgtcatct gatccagcgc cgggatcgcg gtgaactgct gctccagcgg
     3301 cgtggcgatc gacgaggcca tggtggcggg gctggcgccg gggtagttgg cggtgacggt
     3361 gatggtgggg aaatcgacct gcggcagcgc ggcgaccggc agcatcgtat aggcgatgat
     3421 gccgaaaacc agcacgccca gcatcagcag cgaggttgcg atcgggcgcc ggataaacgg
     3481 ttcggagata ctcacttgcg tctatccgct ttcagcttgc cgacccggcg gcgtccggca
     3541 cccggggttt gacacgggcg ccgtcggtga gacggtactg gccctcgacg acaacgtgtt
     3601 cgccgggctt cagcc
//
LOCUS       DATAVD010000773         1648 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_631511, whole genome shotgun sequence.
ACCESSION   DATAVD010000773 DATAVD010000000
VERSION     DATAVD010000773.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_631511"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..634
                     /locus_tag="VHX39_14800"
     CDS             <1..634
                     /locus_tag="VHX39_14800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019090526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HEX3992436.1"
                     /translation="IRPDEVYLIDSGAQYPDGTTDITRTVWTGPGNPPDAVRDQVTRV
                     MQGHIAIATAVFPKGVGGAHLDALARRALWQAGLDYDHGTGHGVGSYLSVHEGPVSIS
                     RLARPVPIDAGMILSNEPGFYLPDHYGIRLENLLLVQAADIPGAQKPFLRFETLTLAP
                     FDRRLLKPALMTAQEREWLDTYHARVLRTVGPFLGEAEQAWLTAACTPLD"
     gene            complement(708..>1648)
                     /locus_tag="VHX39_14805"
     CDS             complement(708..>1648)
                     /locus_tag="VHX39_14805"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEX3992437.1"
                     /translation="RPLRKNVRFFRSPPEAEAAGFRACKRCDPKGERARIAQDVVRDA
                     SDFIEASEEIPSLDVLAKRSGYSRFHFLRMFRDHTGLTPRGYAEAVRARRLQDALADG
                     GRVVDAVAEAGFGSESRVYEKTATLLGMTPGAARRGGVGEYIRTAFADCPFGRLLVGA
                     TDKGVCFIGFAEPDEALMGDLRRRFPKATIAMDDSGLAATVRAVVDFLREPKQALDLP
                     LDLRGTAFQQRVWRTLCSIPAGETRTYAQLAEMAGNPKAIRAVARSCATNPVSLAVPC
                     HRVIGSDGGLTGYRWGVPRKKALLERERVLATAARR"
BASE COUNT          311 a          573 c          493 g          271 t
ORIGIN      
        1 gatcaggccg gacgaggtgt atctgatcga ctccggcgcc caatacccgg acgggacgac
       61 cgatatcacg cggacggtgt ggaccggccc aggcaaccca ccggatgcgg ttcgcgacca
      121 agtgacacgg gtgatgcagg ggcatatcgc gatcgcgacc gcggtgttcc ccaagggcgt
      181 cggcggcgcc catctggacg cgctcgctcg gcgagcactg tggcaggcag gtctggatta
      241 cgatcacggc accggtcatg gcgtaggcag ctatctgtct gtgcacgagg gaccggtcag
      301 tatctcccgg ctggcacggc cagtgccgat cgacgcaggc atgatcctgt cgaacgaacc
      361 cggtttctac ttacccgatc attacgggat tcgattggag aatttattac ttgtgcaggc
      421 cgccgatatt ccgggtgcgc aaaagccgtt cctccgcttc gagaccctga ctctcgcacc
      481 gttcgaccgg cggctgctga aaccggcgct gatgacggca caggagcggg agtggctcga
      541 cacctatcat gcgagagtcc tacggacggt cgggccgttt ctgggcgagg ccgaacaagc
      601 ctggctgacc gcggcatgca cgccactgga ttgaaggcaa gagttcgaga cgccatggcc
      661 gcgtcgcctg atcgagccca tcaataagga cggcagggcg ccccgattca gcgccgtgcc
      721 gcggtcgcca gcacccgttc ccgctccagc agcgcctttt tccgcggcac cccccaccgg
      781 taccctgtca atccgccatc actgccgatc acccgatgac aaggaaccgc cagcgacacc
      841 ggattggtcg cgcaagaccg cgcaaccgct ctgatcgcct tcgggttgcc cgccatctcg
      901 gcgagctgtg catacgtacg agtctcgccg gccgggatcg aacacagcgt tcgccaaacg
      961 cgctgctgga acgccgtacc cctcaggtcc agcggtaaat ccaacgcctg cttcggctct
     1021 cgcagaaaat ccaccacggc ccgaacggtc gccgccagcc cgctgtcatc catggcgatc
     1081 gtcgccttcg gaaaacgccg ccgcagatcg cccatcagcg cctcatccgg ttctgcgaaa
     1141 ccgataaagc acacgccctt gtccgtggca cccaccagca gccggccaaa cgggcaatca
     1201 gcgaaagcgg tacggatata ctcccccacg ccaccccgcc gggccgcacc gggggtcatc
     1261 ccaagcagcg tcgcggtttt ctcatacacg cggctttccg acccaaagcc agcttcggct
     1321 actgcgtcca ccacccgccc tccgtccgcc aacgcatctt gcaatcgtcg cgcccgcact
     1381 gcctcggcgt aaccgcgcgg cgtcaggccg gtgtggtcac ggaacatccg cagaaagtgg
     1441 aaacgtgaat agccggagcg tttcgccagc acgtcgagtg acggaatttc ctcgctggcc
     1501 tcgataaagt cgctggcgtc gcgaacgacg tcctgcgcga tgcgggcgcg ctcacctttt
     1561 ggatcgcagc gtttgcaggc gcggaatcca gccgcctcgg cttcgggcgg agaccggaaa
     1621 aagcgcacgt tcttccgcag cggccgag
//
LOCUS       DATAVD010000774         3869 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_820513, whole genome shotgun sequence.
ACCESSION   DATAVD010000774 DATAVD010000000
VERSION     DATAVD010000774.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3869
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_820513"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..685)
                     /locus_tag="VHX39_14810"
     CDS             complement(<1..685)
                     /locus_tag="VHX39_14810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX3992438.1"
                     /translation="MTDPYAKYTRLRFDRPHPRVLRITMDNGKMNTADNALHGELAEI
                     WRDVDRDPDVNVAILTGAGTVFSAGGDFAMIQENISDFDARARQWREAKDIVYNLINC
                     SKPVVSAMRGVAVGAGLVCGILADVSIATKTCRIIDGHTRLGVAAGDHAAIIWPLLCG
                     LAKAKYYLLLCEQVLGEEAERIGLISLAVEDTELDAKALEVATRLAEGAQSAIRWTKY
                     ALNNWLRSMG"
     gene            complement(815..1906)
                     /locus_tag="VHX39_14815"
     CDS             complement(815..1906)
                     /locus_tag="VHX39_14815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992439.1"
                     /translation="MKFCLISATSMLAIAASAHAYVVSSEPKETNLYDLVHDSDGTAA
                     PADPATIAVLAPGIGRQRASFTGPVDRSAAAGSGFPLVPLGAARSTPPDEDFATQYTG
                     AWHWNAGQRALAIGVARIAPLIGTIGNGSSPGQKPGSTVFIANLDFNGGSSSDSKRRT
                     AGAFAPSSTSTATITLTGPANIPQRAGSGFSVAAPISAEPQPVASQPTPTVPAPTYRY
                     APQPAPTAKANLVAASFANAVIATHAVAQANPHPRTTLLPNSATVAIYARRLDVTQPI
                     NGQSTPTDNDGTRMFLPASVSADPAATAARYVTSVLDAAPGNPSGQSAEVFQISPETP
                     GGAVTSVTVPLQGKIMAGAGPLDNSLALP"
     gene            complement(1948..3093)
                     /locus_tag="VHX39_14820"
     CDS             complement(1948..3093)
                     /locus_tag="VHX39_14820"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3992440.1"
                     /translation="MTELAIVCRTSTGTTDITVSGVPDFAALEAKWRDLETRSNASFF
                     QSWTWTGCLVEQRFASPVLVEARENGRTVALALFNRVGEKLYLGESGDPALDDIFIEY
                     NGVLTEAGGEAALTQSCLRAARSSLWRERLVLSGVNTATLMAAQRIGAVRRVRDRPAY
                     FVDFAAGRDAFLQRRSANTRQQLRRSDRDYAKAGAISIERAQTVPQAYAFLDRLAALH
                     QASWVARGQPGAFASPSFGQFHRALIASGLERGEIDLLRVAAGPQTIGFLYNFRYRGE
                     SLAYQSGFNHTDAGPHSKPGLTCHHQAIRFGAQWGADRYNFLAGDDRYKRSLADRSEN
                     LHWIEVASPYSPRFQMLRLKDYVAGWHRAGSRDGAPSRGGRLPGPEV"
     gene            complement(3090..>3869)
                     /locus_tag="VHX39_14825"
     CDS             complement(3090..>3869)
                     /locus_tag="VHX39_14825"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3992441.1"
                     /translation="NLLPLTRHVHVVDGFGPDERETQIPRRVLLRRMVLGRGKVIVPS
                     RNLEQIATERWKLPERVVKYVPNGIDLARFAKGRRTQAQNPPVIGTVAALRPEKNIGR
                     LIRAFAAAVRECPARLVIVGDGPERLSLTALAAEQGVADLVTFTGQRDDTPSLYAGFD
                     LFALTSDTEQMPLSVIEAMASGLPVVATDVGDVRTMVAAENAPYLGSRDDAVIARMLA
                     GMLAGSDTRARIGIANRAKAERDFDQAAMFSAWRGLWTGEG"
BASE COUNT          678 a         1245 c         1238 g          708 t
ORIGIN      
        1 ggcccatact gcgcaaccaa ttgttcagcg cgtatttggt ccagcggatg gctgattggg
       61 caccctcggc caacctggtc gccacctcga gggctttggc atcgagttcg gtatcttcga
      121 cggcgaggct gatcaggcca atccgttctg cctcctcacc aagcacctgt tcgcacagca
      181 gcagataata tttcgccttc gccagtccgc acagcaacgg ccagataatc gctgcgtgat
      241 ccccggcggc gacgccaagc cgcgtgtgac cgtcgatgat gcggcaggtt ttggtcgcaa
      301 tcgaaacgtc cgccaggata ccgcaaacca gaccggctcc gaccgccacg ccgcgcatcg
      361 cactgaccac cggcttggag caattgatca ggttgtaaac gatgtccttg gcttcccgcc
      421 attgccgcgc gcgcgcatca aaatcggaga tattctcctg gatcatggca aagtcgccgc
      481 cggcggaaaa cacggtgccc gctccggtca ggattgccac attgacgtcg ggatcgcgat
      541 ccacgtctcg ccagatttcc gccaactcgc cgtgcagcgc gttatcggcg gtgttcattt
      601 tgccattgtc catggtgatc cgcagcaccc gagggtgcgg acgatcgaag cgcaggcggg
      661 tatatttcgc gtagggatcg gtcatgagcg tgcctcgctt gcggtggatc gccgatcgga
      721 accggtatgc ggccggtcta cgagcggctg accatggccg gatgccgtgc gctcaaatct
      781 cacgactgcg cgtcggcctc aaccccggtg tgggctacgg cagcgccagc gaattatcca
      841 atgggccagc gccggccatg atctttcctt gcaggggaac ggtcacgctg gtcactgctc
      901 caccgggcgt ttctgggctg atttgaaaga cttcggccga ttgcccggaa gggttgccgg
      961 gagcggcatc gagaacactc gtgacatagc gggcagccgt ggccgctggg tcggcactga
     1021 ccgacgccgg aaggaacatt cgcgttccgt cgttatcggt tggtgtgctc tgaccgttga
     1081 tcggctgtgt cacgtcaagc cgccgcgcat aaatcgcaac cgtcgcactg ttcggcagta
     1141 aggttgtccg cggatgggga ttggcctgag ccacagcgtg cgttgcgatg accgcgttgg
     1201 caaaactggc cgccaccaga ttggccttcg ctgtgggtgc tggctgcggg gcgtagcgat
     1261 aggtcggcgc ggggaccgtg ggcgtcggtt ggctcgccac cggctggggt tccgcgctga
     1321 tcggtgcggc gacggagaac ccgcttccgg cccgctgcgg gatgttggcc ggcccagtga
     1381 gcgtgattgt tgcggtgctt gtgctgctgg gggcgaaggc accagcggtc cgccgcttac
     1441 tgtccgaact gctgccgcca ttgaagtcca ggttggcaat gaacacggtg ctgccgggct
     1501 tctggccggg cgaggaccca tttccaatgg taccaatcaa cggagcaatt cgggccacgc
     1561 cgatcgccag ggctctttgc cccgcattcc agtgccacgc cccggtatac tgtgtggcaa
     1621 aatcctcgtc cggcggcgta ctgcgcgccg cgcccaacgg aaccagcggg aagccggatc
     1681 cggcggccgc agaccggtca acgggtccgg tgaagctggc ccgctgccgt ccgatacccg
     1741 gcgctaagac ggcaatcgtc gccggatcgg ccggagccgc agtgccgtcg ctatcgtgca
     1801 ccagatcgta aaggttggtt tctttgggct ctgaactgac aacgtaagcg tgcgcggacg
     1861 cggctatcgc caacatcgac gtcgcggaga tgaggcaaaa tttcatgcct cgcaccaacc
     1921 ttcatggcca tgtctcggtt gcatcgctta aacctctggg cctggcaatc ggccgccccg
     1981 gctcggagca ccgtcccgcg accccgcacg atgccagcca gccacgtaat ccttgaggcg
     2041 gagcatctga aaccgtggcg aatacggact ggccacctcg atccaatgca ggttctccga
     2101 ccggtctgcg aggctgcgtt tataccggtc atcccctgcc aggaaattat atcgatcggc
     2161 gccccattgg gcaccgaacc ggatcgcctg gtgatgacag gtcaggccag gtttgctgtg
     2221 gggtcccgca tctgtgtgat tgaacccgct ctgatacgcc agcgattccc cgcgatatcg
     2281 gaaattgtag agaaacccaa tggtttgcgg gcctgccgcg acgcgcagca aatcgatttc
     2341 cccgcgctcc agaccgcttg cgatcaatgc tcggtggaac tgcccgaagc tcgggctggc
     2401 gaacgcacct ggctgccctc gcgccaccca tgaggcctga tgaagtgcgg cgagccgatc
     2461 cagaaacgcg tacgcctgcg gaacggtttg cgcgcgttcg attgagatgg caccggcttt
     2521 tgcataatcg cggtccgagc ggcgcagttg ttgcctcgtg ttggcactgc ggcgctgcag
     2581 gaacgcgtcg cgtccggcgg cgaaatcgac gaagtacgct gggcgatccc ggacgcgccg
     2641 caccgctccg atccgctgtg ccgccatgag ggtggcagtg ttgaccccgc tcagcaccag
     2701 acgctcccgc cagagcgacg agcgggcggc acgcaggcag gattgggtca gtgcggcttc
     2761 ccctccggcc tcggtcagca cgccgttgta ttcgatgaaa atgtcgtcca gcgccggatc
     2821 gccgctttca cccagataca gcttctcgcc cactcggttg aacaacgcca aggcgacggt
     2881 ccggccattt tcgcgggctt ccaccaggac cggactggcg aaccgctgct ctaccaggca
     2941 gccggtccag gtccagcttt ggaagaatga cgcgttggag cgcgtttcga ggtcgcgcca
     3001 cttcgcttcc aatgcggcaa aatccggcac gccggacacg gtaatgtccg ttgtacccgt
     3061 gctcgtccgg cacacaatgg ccagttcggt cacccctccc cagtccacaa gccgcgccag
     3121 gcggagaaca tggcggcctg atcgaagtcg cgttccgcct tggcgcgatt ggcaatcccg
     3181 atgcgagccc gcgtgtcgga accggccaac attcccgcca gcatccgggc tatcacggca
     3241 tcgtcgcgag agcccagata cggcgcgttc tccgccgcca ccatcgtccg cacatcgccg
     3301 acatccgtgg cgacgacggg caggccgctg gccatggcct cgatcaccga cagcggcatc
     3361 tgctcggtat cggacgtcag agcaaacagg tcgaagccgg cgtacagcga gggtgtgtcg
     3421 tcgcgctggc cggtgaaggt gaccaggtcg gcgacacctt gttcggcggc aagggcggtg
     3481 agcgacagac gctcgggtcc gtcgccgacg atgacgaggc gcgccggaca ctcgcgcact
     3541 gccgcggcaa acgcccggat caggcgcccg atgttcttct ccgggcgcaa tgcggcgacg
     3601 gtgccgatca ccggaggatt ttgggcctgg gttcgacgac ccttggcaaa gcgggcgaga
     3661 tcgatcccgt tgggcacgta tttcaccacg cgttccggca gtttccagcg ctcggtggcg
     3721 atctgctcca ggttacggga cggcacgatg accttgccac gtccaagcac catacggcgg
     3781 agcaagacgc ggcgggggat ctgggtctcg cgctcgtcgg gcccgaagcc gtcgacgacg
     3841 tgcacgtgcc gggtcaacgg cagcagatt
//
LOCUS       DATAVD010000775         1649 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2865548, whole genome shotgun sequence.
ACCESSION   DATAVD010000775 DATAVD010000000
VERSION     DATAVD010000775.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2865548"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1070
                     /locus_tag="VHX39_14830"
     CDS             <1..1070
                     /locus_tag="VHX39_14830"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HEX3992442.1"
                     /translation="AAWLIRIEGQTTPQMWDEFQEWLEADRRHEAAFIRLRTAWTHCD
                     RFKLLRPADGRVDRNLLSQLSADEWNGRTGLPDLVESEGEEAQHRVDRRRWLMFVGAT
                     AAATTGVGMLGWLSADHRRWTYLESGVGGNRRAVLADRSQLLLNTDSRLRVRLANARR
                     DSELIRGEAYFSVAHEKLRPFYVKAGRTLVCAMGTAFSVRIHDDHSVEVLVAEGRVAM
                     GTTEPGSGSGAPVLADSAPHAASNESVAASANSLVIRQHPAGYVARKLAWTIGNISFD
                     GETLTEAVGEFNRYNRRHLVIADPAIASMKVGGSFEANDPESFAATLEKHFGVQRVPA
                     ARGDNDVIRLVSSEPRTTPRS"
     gene            1161..>1649
                     /locus_tag="VHX39_14835"
     CDS             1161..>1649
                     /locus_tag="VHX39_14835"
                     /inference="COORDINATES: protein motif:HMM:NF019283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STN domain-containing protein"
                     /protein_id="HEX3992443.1"
                     /translation="MVCLLATPLVNASAPDPEPRAAVEFHIQGGDATTTLTEFSRQAR
                     LQLLFDYNVVKGHTTKPLDGALQPAEALRRLLANSDLEFDFVNERTLAVMQKRVPEEH
                     DQSTTTPPRPAKRPATKLKTNKVAIDAADAVEVVRITGTNIRDKVPVGQEIIRASRED
                     IEG"
BASE COUNT          329 a          523 c          534 g          263 t
ORIGIN      
        1 cggccgcgtg gctgatccgc atcgagggcc aaacgacgcc gcagatgtgg gacgagttcc
       61 aggaatggct ggaggcggac cggcgccacg aggcggcgtt catccggctg cgcaccgcat
      121 ggacccattg cgaccgtttc aagctgctac gcccggctga cgggcgggtt gaccggaacc
      181 tgctgtcgca attgtcggcg gatgagtgga acggcaggac cgggttaccg gatctcgtgg
      241 aatctgaagg cgaggaagca caacaccgcg ttgaccgaag gcgatggctg atgttcgtcg
      301 gtgcgaccgc ggccgccacg accggggttg gcatgctcgg ttggctgagc gcggatcacc
      361 gtcgctggac ttacttagag tcgggagtgg gaggtaacag gcgggcggta ctggccgatc
      421 gcagccagct cctgctgaat accgacagcc gcctgcgcgt gcggctggca aatgcgcggc
      481 gcgacagcga gctcatccgt ggcgaggcgt acttcagcgt cgctcacgaa aagctgcggc
      541 cgttttatgt gaaggcgggc cgaactctcg tatgcgcgat gggtacggcg ttctcggtcc
      601 gtatccatga cgaccacagc gtcgaagtgc tggtcgccga aggccgggtc gcaatgggca
      661 cgaccgagcc cggctccggt tccggggcac cggttctggc cgactcggca ccgcatgcag
      721 ccagcaatga aagcgtcgcc gcgagcgcca attccctggt catccgccag cacccggccg
      781 gctacgtggc ccgcaagctg gcctggacga taggcaacat ctcgtttgac ggcgaaacgc
      841 tgacggaagc ggttggcgaa ttcaatcgct acaaccgtcg gcatctcgtc atagccgatc
      901 ccgcgatcgc ctcgatgaag gtcggtggca gcttcgaagc caacgacccc gaaagcttcg
      961 cggcaacact cgaaaaacat ttcggcgtgc aacgcgtgcc cgctgcccgg ggagacaatg
     1021 acgtgattcg attggtgagc agcgagccac ggacaacgcc acggtcgtaa gagatccgct
     1081 ccgcggctgc ggaacgtggc atacaggtcg tcaaaatagt gcgaatggat tttcgtacac
     1141 agtgccgggt atggaccttg atggtctgtc tcctggccac cccgctggtg aacgcgtcag
     1201 ccccggatcc tgagccccgc gccgcggtcg aatttcacat ccaggggggc gatgccacca
     1261 cgacgttgac ggagttcagc cgccaggcgc gcctccagct tctcttcgac tacaacgtcg
     1321 tcaagggaca cacgaccaag ccgctcgacg gcgccctcca acccgcggag gccttacgcc
     1381 gcctgctggc caactccgat ctcgagttcg acttcgtcaa cgagcgcact ctggcggtga
     1441 tgcagaagcg tgtcccggag gaacacgatc aatcgacgac cacgccgccc aggcccgcga
     1501 agcgccccgc cacgaaatta aaaaccaaca aggtcgctat cgacgcggct gatgccgtgg
     1561 aggtcgtccg catcaccggc acgaacatcc gcgacaaagt ccccgtcgga caggagatca
     1621 tcagggccag ccgcgaggac atcgaagga
//
LOCUS       DATAVD010000776         2865 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1189913, whole genome shotgun sequence.
ACCESSION   DATAVD010000776 DATAVD010000000
VERSION     DATAVD010000776.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2865
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1189913"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..314
                     /locus_tag="VHX39_14840"
     CDS             <1..314
                     /locus_tag="VHX39_14840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992444.1"
                     /translation="EPERIAVQLGRHPNDLMLSYCMRTPGDILVECGWGGREVDDATW
                     EPEEMTSVDSMWGHQGLFEALGNPDMPEQKHRHAPLQVIDGNYEKMSGACPWWDGMRR
                     N"
     gene            594..1295
                     /locus_tag="VHX39_14845"
     CDS             594..1295
                     /locus_tag="VHX39_14845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992445.1"
                     /translation="MSDAREIGRAVIIGVAAKEHGDNATFIIDPAKFIASHACQLHAE
                     IEEATGASSGSATSAAFTRSTCGTQGIQFLPVANQRLTVKLLEAPSPFVGMPMIKCFA
                     GAGGKEVIFLPWQEDRCTLTVLSNSADLFLTGPLSGCNVYLATRAGSPPMVFHGNANA
                     NSSSVPLNNQVKDAEAARIAGEKGYSITNRLARGQYELPAFICGYRFDTTWAMFVHEF
                     NVATRVQSNKSLPAK"
     gene            complement(1700..2557)
                     /locus_tag="VHX39_14850"
     CDS             complement(1700..2557)
                     /locus_tag="VHX39_14850"
                     /inference="COORDINATES: protein motif:HMM:NF015056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEX3992446.1"
                     /translation="MLEIEFTEIIAQPTGFSAIVPGLGFLRDVMTEPFLVHWEMRDGW
                     ASSAQIPGVRIPGAPFMGVSAVAPSAEALAAWTAREQRVIDRGGMAFPPDPAGAVPSG
                     PCGLTGLRTLPPRENGGNFDVKQLTKGAKLFLPVFQEGALFSTGDGHFAQGDGEVCVT
                     AVEMGATAVVRFKVHKGVAAARKFRSPVFSRVGYFADPRFAIPERFLGVMGMPINAAG
                     EIEAENLTLACRNALLNMIELLQERGFSRQQAYVICSVAVDLRISNVVDVPNFVVSAL
                     LPEAIFDGA"
     gene            complement(2470..>2865)
                     /locus_tag="VHX39_14855"
     CDS             complement(2470..>2865)
                     /locus_tag="VHX39_14855"
                     /inference="COORDINATES: protein motif:HMM:NF015056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEX3992447.1"
                     /translation="RYKPLVVAFPRRRRPGEIKMHTIHIDRGKRLCDEPNCGHNRYHP
                     DISPIIEIGEGEEVALETRDGVDGQLGPGSTVADFATMDFGAVHPLTGPVFVKGPRQA
                     ICWKSSSPKSSRNPPASARSCLGWVSCAT"
BASE COUNT          573 a          878 c          865 g          549 t
ORIGIN      
        1 ccgagccgga gcggattgct gtacagctgg ggcggcatcc gaatgacctg atgctttcgt
       61 attgcatgcg cacaccaggc gacatcctgg tggagtgcgg ctggggcgga cgcgaagtgg
      121 acgacgctac ctgggagccg gaggaaatga ccagcgtgga cagcatgtgg ggtcatcaag
      181 gactgttcga ggccctcgga aatccggaca tgccagagca gaaacatcga cacgcaccgc
      241 tgcaggtgat cgacggcaac tacgagaaga tgtccggcgc ctgcccctgg tgggacggca
      301 tgcgtcggaa ctgaccggtt agttccactc cattttctct cgccttggtt cacgccacga
      361 acaggctaac gctttggcgg ccgaagcacc gtggggggca gccgctcggg ttgccggccg
      421 ctgagtgcga tcctgccgac gccgagacgg tcgtcattgg tgacgggaga tcccgctttt
      481 tcccacgtgg ccgtatcgct cgcgcactcg gcaaatatcg gtctatggat ggcgaccggg
      541 tggcgtcata atgaccaggc cgccatcccg tgcgtggaag gaaacaaggc aaaatgtcag
      601 acgccagaga gattggccgc gccgtcatta tcggcgtcgc cgcgaaagaa cacggcgaca
      661 acgctacctt catcatcgat cccgcaaagt tcatcgcctc gcatgcctgc caactgcatg
      721 cagagatcga ggaagcaacc ggagcatcga gcggttcggc gacaagcgcc gcgtttaccc
      781 ggtccacctg cggcacgcag ggtatccagt ttctgcccgt ggcaaatcaa cggctgacgg
      841 ttaagttgtt ggaggcgcca tcgcccttcg tcggcatgcc gatgatcaag tgcttcgcag
      901 gtgccggcgg caaagaagta atcttcctgc cgtggcagga ggatcggtgc acgctcaccg
      961 ttctgtcgaa ctcggctgat ctctttctga ccggcccgtt gtcgggctgc aatgtttacc
     1021 tcgccacccg tgccggatcg cctcccatgg tgttccatgg caatgcgaat gcgaacagtt
     1081 cgtcggtccc gttgaacaac caggtgaaag acgctgaagc agcgagaatc gctggcgaga
     1141 aaggctattc gatcacgaat cggctggccc gcggtcagta cgagttgccg gccttcatct
     1201 gtggttatcg gtttgacact acctgggcca tgttcgtgca cgaattcaac gtggcaacac
     1261 gggtccagag caacaaatcg ttgccggcga agtaggacgg cgattcagct tcgcgcagat
     1321 ggtgtttgtg gattctgcaa gctcgcgagt tgaccgctct caggtgacga gatcgtggtt
     1381 accgaagaac ctcctgccca cacccggctt ggctgggttg ggcccattct acccgttcag
     1441 acggtcggcg ccgtttctcc aaagcggtcg ttgtgggcgc gacggcaaat cgctgggtcg
     1501 agttgagagc gctaattcag tgtccggtaa cttcaaccgg accgacactg gcggaagcga
     1561 atggtcgttg ccaaagcctt gaatgttact gctttagacc cacaattccg ttagacctga
     1621 tcaaattggt cgtttaacgg tcgtcttgcc gttgccgaat atacacagga ctggttgtct
     1681 tagtacccgc cctgacgcat caggcgccgt cgaagatcgc ctccggcagc agcgcggaca
     1741 ccacgaaatt cggcacgtcc acgacgttgg aaatccgtag gtccaccgcg acgctgcaga
     1801 tcacatacgc ctgttgccgg ctgaacccgc gctcctgcaa caattcgatc atgttcagca
     1861 aagcgttgcg acaagcgagc gtcaggttct ccgcctcgat ttcgcccgcc gcgttgatcg
     1921 gcatccccat cacgccgagg aatcgctcag gaatggcgaa ccgcggatcg gcgaagtaac
     1981 cgacccgcga gaacacaggc gacctgaatt tgcgtgccgc agcgaccccc ttgtgcactt
     2041 tgaagcgcac gaccgccgtt gcccccatct caaccgccgt gacgcaaact tcgccatcgc
     2101 cctgggcgaa atgcccgtca ccagtggaga acagtgcgcc ttcctggaac accggcaaga
     2161 aaagtttcgc gcccttggtg agctgtttca cgtcgaagtt gccgccgttc tctcgtggcg
     2221 gcagcgtgcg tagaccggtc aggccgcacg gcccagaggg aaccgcgccg gcgggatcag
     2281 gtggaaacgc catgccgccg cggtcgatca cgcgttgttc tcgcgcagtc catgccgcca
     2341 gagcctcggc cgagggggcc acggccgaga cgcccataaa cggggcgccc ggaattcgca
     2401 cccctggaat ttgtgccgac gaggcccacc cgtcccgcat ttcccagtga accaggaatg
     2461 gctcggtcat tacgtcgcgc aggaaaccca gcccaggcac gatcgcgctg aagccggtgg
     2521 gttgcgcgat gatttcggtg aactcgattt ccagcagatc gcctggcgag gacccttgac
     2581 gaacaccgga ccggtcagag gatgcaccgc cccgaaatcc atcgttgcga aatccgcgac
     2641 ggtggaacca ggcccaagct ggccgtcgac gccgtcgcgc gtttcgagcg cgacctcctc
     2701 gccttcgcca atctcgatta tcggagaaat gtcggggtgg taccgattgt gaccacaatt
     2761 cggttcgtcg cagagcctct tgcctcgatc gatatggatc gtgtgcatct tgatttcccc
     2821 cggccggcgg cggcgcggaa acgctaccac caatggttta tagcg
//
LOCUS       DATAVD010000777         1901 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3611127, whole genome shotgun sequence.
ACCESSION   DATAVD010000777 DATAVD010000000
VERSION     DATAVD010000777.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3611127"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(116..1117)
                     /locus_tag="VHX39_14860"
     CDS             complement(116..1117)
                     /locus_tag="VHX39_14860"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX3992448.1"
                     /translation="MRDRPFADDTGLPPRGMSAGSNVDPIAARSILIVGAPRSGTTWL
                     AKIFDSHPDVLYRHEPDEVVPASGSIEQDVAGWIRQRNARTAGKRPFFRKSWQTTPAW
                     LLRSSLAYAGAAAERIGFTGWPLPDMGDLRRAKVVIKSVRLCTGIGAFAQAYPAGRVV
                     LILRHPCGQVASVMQGARDRRFALAEPGTDMPFDEAAAVKFAAGHGVDEPTFQRLPDA
                     AKYAWSWRAFNEPAWLAISGLSNAKVVVYEDLCAKPQAQAWAILAFAGLQLHSQTEAF
                     LTRSTRFDGAAGYYDVVRNSVAAAERWRTAMAVEDQAAVNSVVRGSPLLGYWPDIPN"
     gene            complement(1136..>1901)
                     /locus_tag="VHX39_14865"
     CDS             complement(1136..>1901)
                     /locus_tag="VHX39_14865"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3992449.1"
                     /translation="KPKETPMTAIPLPAELNMQGKRVLVTGAASGIGKATASVLAQLG
                     ATLLLVDRAPLAATQDEVTALGCPGEISEGDLTDDSFLASLFAGSRLHAMAHCAAILE
                     ARDWRNDKAWRERFHRVMDINVRVPLEITMRAIDHMAAHGGGHIALVGSVAGKTGGTS
                     LNTPPDYSASKGAVHALVKWTSRHGVSQGVMVNAVAPGPVETPMTRGSNLGPNLPLRR
                     MGRADELAWPIAFLCTPAASYLSGAVIDVNGGAFVG"
BASE COUNT          335 a          626 c          609 g          331 t
ORIGIN      
        1 cggtcgagca tatcgagcac gatgtcgacg accctcggac ggtcgaacac gggtcggcgt
       61 gagccgtgat cctggcgatt ggacctcgat ccgaccgcgc gacgatgccg gaccgtcagt
      121 tcggaatgtc gggccagtat ccgagcaacg gcgaaccccg cacgactgaa tttactgcag
      181 cctgatcctc gactgccatc gccgtccgcc atcgttcggc tgccgcaacc gaattgcgca
      241 cgacgtcgta atatcctgct gccccatcga aacgcgtgct gcgagtcaaa aacgcctctg
      301 tctggctgtg aagttgcagg ccagcgaacg ccaggatcgc ccatgcctgc gcctgtggct
      361 tcgcgcacag atcttcgtag accaccacct tcgcgttgct gagcccggaa atcgcgagcc
      421 aggcaggttc gttgaacgca cgccagctcc aggcgtattt ggcggcgtcg ggcaggcgct
      481 ggaatgttgg ctcatccact ccgtggccgg cagcgaactt taccgcggca gcctcatcga
      541 agggcatgtc ggtgccgggc tcggccaacg cgaaccgccg gtcccttgcc ccctgcataa
      601 ccgacgcgac ctggccacaa ggatgccgca aaatcagcac cacccgtccc gccggataag
      661 cctgggcgaa cgcgccaata ccggtgcaca accgtaccga tttgatcacc actttcgcac
      721 ggcgcaaatc ccccatatcg gggagcggcc agccagtgaa gccgatccgc tctgccgccg
      781 ctccggcata agccagcgac gaacgcagca gccaggccgg tgtcgtttgc caggatttcc
      841 ggaagaacgg ccgctttccc gcagtgcgcg cattgcgctg ccggatccaa ccggcgacat
      901 cctgctcgat cgacccgctc gccggcacca cctcatccgg ctcatgccga tacagcacgt
      961 cggggtgact atcgaatatc ttggcaagcc aggtcgtccc agagcgcggc gcgccgacga
     1021 tcaggatcga gcgggccgca atgggatcga cgttcgaacc ggcagacatg ccgcgcgggg
     1081 gcagcccggt gtcatccgca aaggggcgat cgcgcaccgg cgtcggcctg gcgctctatc
     1141 ccacgaacgc gccgccgttt acgtcgatga cggcgccgga caggtagcta gccgccggtg
     1201 tgcaaaggaa cgcgatcggc caggccagtt cgtcggcgcg gcccatacgg cgcaatggca
     1261 ggttggggcc aaggttggaa cccctcgtca ttggggtttc caccgggccg ggcgcgacgg
     1321 cgttgaccat gacgccctgg ctcacgccgt gccgcgaggt ccatttcacc agtgcgtgca
     1381 ccgcaccctt ggaagcggaa taatccggtg gcgtattgag tgacgtgcct ccggttttgc
     1441 cggccaccga gccgaccagt gcaatgtgac cgccgccatg tgccgccatg tggtcgatgg
     1501 cgcgcatggt gatttccaat ggaacgcgga cgttgatgtc catgacgcgg tggaaccgtt
     1561 cgcgccacgc tttgtcgttg cgccagtcgc gggcttcgag aatcgcagcg caatgcgcca
     1621 tggcgtgcag tctggaaccg gcaaacaggc tggcgagaaa gctgtcatcg gtcaggtcgc
     1681 cctcgctgat ttcgccggga cagccaagtg cggtgacctc gtcctgtgtg gctgcgagcg
     1741 gcgcgcggtc caccagcagc agtgtggcgc ccagttgggc gagcaccgat gcggtggctt
     1801 tgccgatgcc gctggcggcg ccggtgacca ggacgcgttt gccttgcatg ttgagttcgg
     1861 ccgggagagg gattgcagtc attggcgttt ccttcggttt c
//
LOCUS       DATAVD010000778         4451 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2865744, whole genome shotgun sequence.
ACCESSION   DATAVD010000778 DATAVD010000000
VERSION     DATAVD010000778.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4451
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2865744"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..571
                     /gene="kdsA"
                     /locus_tag="VHX39_14870"
     CDS             <1..571
                     /gene="kdsA"
                     /locus_tag="VHX39_14870"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEX3992450.1"
                     /translation="LTDIHEPAQCAEVAQAVDVLQIPAFLCRQTDLLLAAAATGKVVN
                     VKKGQFLAPWDMANVVAKITGTGNRNVLATERGVSFGYNTLVSDMRALPILARTTGAP
                     VIFDATHSVQQPGGKGASSGGEREFVPVLARAAVAVGVAGVFIETHPDPDHAPSDGPN
                     MVPLREFEGLVRTLMAFDGIAKNPQNVAR"
     gene            571..1794
                     /locus_tag="VHX39_14875"
     CDS             571..1794
                     /locus_tag="VHX39_14875"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992451.1"
                     /translation="MPHKGLRSHEQRLPPALNIIALATFAASLSARALDPVLPHVADD
                     FGVSITTAAGFAAGFAFTFAVVQPVIGAAADLFGKARLMIGCLVLLGLANILGAMTTS
                     FSLLFATRILAGVGSGGVFPVALGLTSDLVGHEKRQVAIGRTLAGAMTGNLLGASASG
                     LIGDFLGWRGVLAVLGGLVVVASVAVAVGFHGAELARPPRTNLTALRHGYRTIFSNPN
                     AICFAAVFIEGCCVLGLFPYLAAFLFELGETSLSVAGIVIAGFAVGGLFYTLSVSRFL
                     PRLGVNGMMTAGASLVGLQLAVIAFGPPWKFQFLSLVFMGWGFYMVHGCMQVFASELS
                     VEARATALSLHSFFFFMGQTVGPIAYGFGIQNLGKSPTLLASAVVMVILGVACTQLLR
                     PRRPADAEVRPDVQP"
     gene            complement(1855..3891)
                     /locus_tag="VHX39_14880"
     CDS             complement(1855..3891)
                     /locus_tag="VHX39_14880"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEX3992452.1"
                     /translation="MLDVMMVAMPQPIAGISFTPPNSHAIIHPTGWVYQVCPRPPSGL
                     SCPSNSRTVASYGGVRLAVQPGDTLKIRYVNRLPKVDPLKLRHVTDPGEANLFLNPSN
                     LHTHGLITPARTPTVGDPTFGDYVFVTVFNSANGIPTPQATHQHGPIVMDTVDYKIAI
                     PPNHPSGLFWFHPHVHGIALNQLVEGLSGIITIGSVGDNVRGDAAVARWPDTHVRHLM
                     LKETQVLAAGTIGFDSGPQPVANGEVLNQEDPDFCAQTPANGETRQGSCPGQDNTADD
                     GNNYTGGKWYMTVNGQQFPTVPITAPDGEIWRVATGAGSLSWDLKLVDDETHRPMTVQ
                     LLAIDGVSVHLPQDTTPGAMVDMAGGRFKVVPCPDVSAVGSTLPVCVNEIVMMPSART
                     EFWVTYRDAAGRITAPRHGASATLKMAGLTMGSGDSWPAVDLAKVLFNQPGGREFTSR
                     EIIVGGSTDAAGLHQPNGIFRAQVPDAHGAAATMSAAETSATAAACAPLPKGHRRRIF
                     FGFSDVTVNNTFALGYEEVDQHGKVVPGSQKPGPDQLEQFEPAHTTICLPLGPGQTPV
                     TETWELVQLSTENHNFHIHQTRFAMTGRNGGVLQDNFPLGVAAPDHAISDKVANDQNG
                     VCTIAQWRNGHCVSPPTAFDIPFAELGEFVYHCHILEHEDGGMMARIKVVPAAF"
     gene            4246..>4451
                     /locus_tag="VHX39_14885"
     CDS             4246..>4451
                     /locus_tag="VHX39_14885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992453.1"
                     /translation="MWQVAGWLCAVVAMSCEAVPDIALIQSAYEREASAGSTLHDKGL
                     QVLQAKCHDTGSTGFLCEVTFTSKG"
BASE COUNT          731 a         1379 c         1461 g          880 t
ORIGIN      
        1 actcaccgat atccacgagc ccgcgcaatg cgccgaggtc gcgcaggcgg tcgacgtcct
       61 gcagatcccg gcgttcctgt gccggcaaac cgatctgttg ctggcggcgg cggcgaccgg
      121 gaaggtcgtc aacgtcaaga agggccagtt cctggcgcct tgggacatgg ccaacgtcgt
      181 cgccaagatc accggcaccg gcaaccgcaa tgtgctggcg accgagcgcg gcgtctcatt
      241 cggttacaac acgctggtgt ccgacatgcg cgcgctgccg atcctggcgc gcaccaccgg
      301 cgcgcccgtg atcttcgacg ccacccattc ggtgcaacag ccgggtggaa agggcgcctc
      361 gtcgggcggc gagcgcgaat tcgtgcccgt gctggcgcgt gcggcggtcg ctgtcggcgt
      421 tgccggggtg ttcatcgaaa cccatcccga tcccgaccat gcgccatcag atggtcccaa
      481 catggtgccg ctgcgcgagt tcgaggggct ggtgcggact cttatggcat tcgacggcat
      541 agccaagaat cctcagaacg tggcgcgttg atgccgcaca aaggattgcg gtcgcatgag
      601 cagcgcctgc cgccggccct caacatcatc gcgcttgcaa cctttgcggc gagcctgtct
      661 gcccgcgcgc tcgatccggt cctgccgcat gtcgccgacg atttcggggt gagtatcacg
      721 acggccgccg gtttcgcggc cggttttgcg ttcacctttg cggtcgtgca gccggtgatc
      781 ggcgccgcgg ccgacctgtt cggcaaggca cggctgatga tcggttgcct ggtgctgctc
      841 ggcctcgcca acatcttggg cgcaatgacc acctcgttct cgctgttgtt cgcaacccgc
      901 attctcgccg gtgtcggctc cggcggcgtg ttcccggtcg cgctcgggct gaccagcgat
      961 ctcgtcggtc acgaaaagcg ccaggtcgcg atcgggcgaa cgctggcggg tgccatgacc
     1021 ggcaatctcc tgggcgcgtc ggcttccggc ctgatcggcg acttcctcgg ctggcgcggc
     1081 gttttggccg tgctcggcgg gctggtcgtg gtcgcttcgg ttgcggtcgc cgtcggcttt
     1141 cacggcgccg agctggcgcg gccgccgcgt accaacctga ccgcgcttcg ccatggctac
     1201 cgtacgattt tcagcaatcc gaacgcgatc tgttttgccg cggtcttcat cgaggggtgc
     1261 tgcgtgctgg gactgtttcc gtatctggcg gcattcctgt tcgaattggg cgaaaccagc
     1321 ctctccgttg cgggcatcgt gatcgcggga ttcgcggtcg gcggcctgtt ctatacgctg
     1381 tcggtgtcgc gtttcctgcc gcggctcggc gtcaacggca tgatgaccgc gggagcctcg
     1441 ctggttggtc tgcaacttgc cgtcattgcg ttcgggccgc cctggaaatt ccagtttctc
     1501 agcctcgtct tcatgggctg gggtttttac atggtccacg gctgcatgca ggtgttcgcc
     1561 agcgaactgt cggtggaagc ccgcgctacg gcgctctcgc tgcattcctt tttcttcttc
     1621 atgggtcaaa ccgtcggtcc gatcgcctac ggcttcggta tccagaatct cggcaagtca
     1681 ccgaccttgc tggccagcgc ggtggtgatg gtgatcctcg gtgtcgcctg cacgcagctg
     1741 ctgcggccaa ggcgtccggc ggatgccgag gtgcggccgg acgtgcagcc ttagcccaag
     1801 cgacgcgcgg cgagacgacg cgggttggtt tgcccgcgcc gcaaaacacc aggcttagaa
     1861 ggcggccggc actaccttga tcctcgccat catgcccccg tcctcatgtt cgaggatgtg
     1921 gcagtggtag acgaattccc caagctccgc gaacggaatg tcgaaggccg ttgggggcga
     1981 gacgcaatga ccgttgcgcc actgcgcgat ggtgcagacg ccgttctggt cgttcgcaac
     2041 cttgtcggaa atggcgtgat cgggcgccgc cacgccgagc gggaagttgt cctgcaacac
     2101 cccgccattg cggccggtca tggcaaacct cgtctggtgg atgtggaaat tgtggttctc
     2161 ggtcgacaac tggaccagct cccacgtctc cgttaccgga gtttggcccg gtccaagcgg
     2221 cagacagatc gtcgtgtgcg cgggctcgaa ctgctccagc tggtcgggcc ccggtttttg
     2281 cgatccgggg acgacctttc cgtgctggtc cacctcctcg tagccgagcg cgaaagtgtt
     2341 gttgacggtg acgtcggaga agccaaagaa aatacgacgg cgatgaccct tgggcagcgg
     2401 cgcgcaggct gccgccgttg cgctcgtctc tgccgccgac atggttgctg ccgcgccatg
     2461 ggcatcgggg acctgcgccc ggaagatgcc gtttggctgg tggaggcccg cggcgtcggt
     2521 ggagccgccg acgatgatct ccctgctggt gaattcccgc ccgccgggct gattgaacaa
     2581 cactttggcg agatcgaccg ccggccatga atcgccgctg cccatggtaa gtccggccat
     2641 cttgagggtc gcggaggcgc catgtcgggg cgccgtgatt ctgccggcgg cgtcgcgata
     2701 ggtgacccag aactcggtgc gtgcgctcgg catcatgacg atttcattga cgcacaccgg
     2761 cagcgtcgag ccgaccgcgg agacgtcggg acagggcacg accttgaagc ggccgcctgc
     2821 catgtcgacc atggctcccg gcgtcgtgtc ctgcggcaga tggaccgaaa cgccgtcgat
     2881 cgcgagcaac tgcaccgtca tcggacggtg cgtttcatca tcgacgagct tgaggtccca
     2941 gctcaggctg cctgcgccgg tggcgacacg ccagatctca ccgtccggcg ccgtgatcgg
     3001 cacggtcgga aattgctgac cgttgacggt catgtaccat tttccgccgg tgtagttgtt
     3061 gccgtcgtcc gccgtgttgt cctggccggg acatgacccc tgacgtgttt caccattcgc
     3121 cggagtttga gcgcaaaaat ctggatcctc ctgattcagt acctcgccgt tcgcgaccgg
     3181 ctgcgggccg ctgtcgaaac cgatcgtgcc agcggcaaga acctgggttt ccttgagcat
     3241 caggtggcgg acgtgggtgt ccggccaccg cgccacggcc gcatcgccgc ggacattgtc
     3301 gcccacgctg ccgatggtga tgatccccga caggccctcg acaagctggt tgagtgcgat
     3361 gccgtgcacg tgcggatgaa accagaacag accggaagga tggttcggcg gaatggcgat
     3421 cttgtaatcg accgtatcca tcacgatcgg tccgtgctgg tgcgtcgcct gcggcgtcgg
     3481 aatgccgttg gccgagttga agaccgtcac aaagacgtaa tcgccgaacg tgggatcgcc
     3541 gaccgtcgga gtccgcgccg gcgtgatcag gccgtgcgtg tgcaggttgc tcggattgag
     3601 gaagagattg gcctcgcccg gatcggtcac atgccgcagc ttcaggggat cgaccttcgg
     3661 cagcctgttg acgtaacgga tcttcagcgt atcgccaggc tggacggcga gacgcacgcc
     3721 gccataagac gccaccgtgc ggctgttcga cgggcaactc agtccggaag gcggacgcgg
     3781 gcagacctga tagacccacc cggtcggatg gatgatcgcg tggctattcg gcggcgtaaa
     3841 cgaaatgccg gcaatgggtt ggggcatcgc gaccatcatg acgtccagca cgccattctg
     3901 actcgcgaat accggaggat cgagcagatc gtctgccaga gccgctccgc taccgatgca
     3961 gaaacttgcg aacaggccgg ctgcggcgat ccatcgacgc atcgaaactt cgtgcaatat
     4021 gtgattgctg gacacggggt gtctccctct tgaattattt tgctactgcg caaaaaaaga
     4081 tcgcgaaaaa cgtattgctg cccgactgta ttggaaccgt attacaggtg tgcgaagata
     4141 ggatcgtaaa gtttttcgcc tgctgaaaat ggatgcgccg cagcggacgc cggcaatcta
     4201 ttgggggcga aacgtaacag tcaagtgtaa cagcggagag ccgggatgtg gcaggtcgcc
     4261 ggatggctat gcgctgttgt cgcgatgtcc tgcgaggcag tgcccgatat cgcgctgatc
     4321 cagtccgctt acgagcgtga ggcctctgcg ggcagcacgc tgcacgacaa gggactgcag
     4381 gtcctgcagg ccaaatgcca cgacaccggc agcacgggat ttctttgcga ggtcaccttt
     4441 acatcgaagg g
//
LOCUS       DATAVD010000779         3094 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_444824, whole genome shotgun sequence.
ACCESSION   DATAVD010000779 DATAVD010000000
VERSION     DATAVD010000779.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3094
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444824"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..999)
                     /locus_tag="VHX39_14890"
     CDS             complement(<1..999)
                     /locus_tag="VHX39_14890"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3992454.1"
                     /translation="MPPATRKIVIIGAGIAGLCTAVLARKSGYDVEVVEQHDNAGGLA
                     TSWHRSGYQFETCLHWLLGSGPASPMHAQWREVFDIDKLTFVYPEEFERLENETGDRL
                     SIYANVDRMEAGFLREAPQDAAEIRHFAAAVRALSGVQMPDPAGEWPHSWLTLLKDLP
                     YLPALHHWSGLTCEAYGTRFSHPLLRQFFGSGEIAQLSALTVVLMLAWMSRHEAGYPI
                     GGSQAIIRPIADNLTQLGGRLRLRTKVEEILVEGDSAVGVRLADGETITADWVISAAD
                     GHATIYELLGGRYRDHTIDRIYQELKPFPSYLQVSLGVARGFPQQPGLVTRVLATPL"
     gene            1295..2173
                     /locus_tag="VHX39_14895"
     CDS             1295..2173
                     /locus_tag="VHX39_14895"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEX3992455.1"
                     /translation="MSPFELAEPTSLGQALALLDPNDPNVRPFAGGTALMLLMKSGLY
                     VPRRLVSLRQVADGIDGIRSVDGGALEIGAMVPLSALQHAPEVRRAAPSIAETLLTHS
                     NVRVRNVATIGGNLAHADPHMDLPPLLMALDAIVRVAGPHGERRIAVEDLFVSYLETV
                     LAGDELIVALILPPQHGRRATYLKCTARAADDWPALGIAASLATRDGIADGVRIAIGA
                     ATATAMRLPGAEAVLEGNRLDEQSLRQAARTAAAEAPVIADQHGSAAYKRVLVEVYVR
                     RALLQIWRDDAKGHGT"
     gene            2170..>3094
                     /locus_tag="VHX39_14900"
     CDS             2170..>3094
                     /locus_tag="VHX39_14900"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX3992456.1"
                     /translation="MSAVTTRQIGRSPPRVEARAKVTGTAEYIHNLRLPGMLFGKIHR
                     STIPHGRIQHIDTAAAMTLPGVARIVTGEDIRKIIPVPYYGPAFHDQPILALEKVRFA
                     GEPVAVALAADPHVAETAAQTIVVEYEPLPAVFDEVEAVSAPVFVHDELKPAGTFADL
                     KHLAGRRDTNIALDFHLRRGDADAAFATADHVFEHTFRTPQQMHTPLEPHVCIADARN
                     GSVTIHSSTQTPSFVRSEIARLLGWPENRVRVRTAFLGGGFGAKVYVKLEALAVALSL
                     LAARPVKLALTMSEQFFTISKHASTFRIKSAV"
BASE COUNT          563 a          982 c          963 g          586 t
ORIGIN      
        1 caagggcgtg gcgagcaccc gcgtcacgag gcccggctgc tgcggaaacc cccgtgccac
       61 gcctaacgac acctgcaaat aggacgggaa tggcttcaac tcctggtaaa tccgatcgat
      121 cgtgtgatcg cgatatcggc ccccaagcaa ctcgtaaatc gtggcatggc cgtcggcagc
      181 cgagatgacc cagtcggcgg taatcgtttc gccatcggcc aatcgcacgc cgaccgccga
      241 gtcaccctcg accaggatct cttcgacctt ggtgcgcaaa cgcagacgtc cgcccagttg
      301 cgtcaggttg tctgcgatgg gacggatgat cgcctgcgaa ccgccgatcg gatagcccgc
      361 ttcgtgccgg ctcatccagg ccaacatcaa caccacggtc aacgccgata attgggcgat
      421 ctcgccgctg ccaaagaact ggcgtagcaa agggtggctg aaccgcgtgc catacgcttc
      481 acaggtcagt cccgaccaat gatgcagcgc cggcaggtac ggcagatcct taagcagtgt
      541 aagccaactg tgcggccatt ctccggccgg gtccggcatc tgcaccccgc tgagtgcgcg
      601 gacagccgcg gcaaaatggc ggatttcggc ggcgtcctgt ggcgcctcgc gcaggaaccc
      661 ggcttccatg cgatcgacgt tcgcatagat gctcaggcgg tcgccggttt cgttctccag
      721 gcgctcgaat tcttccggat aaacgaaggt caacttgtcg atgtcgaaca cctcgcgcca
      781 ctgcgcatgc atcggcgagg cgggaccaga tccgagcagc cagtgcaggc aggtctcgaa
      841 ctggtagcca ctccggtgcc aactggttgc cagcccgcct gcattgtcgt gttgctcgac
      901 cacttcgacg tcgtagccgc ttttgcgcgc caggaccgcg gtgcacaggc ccgcaatgcc
      961 ggcgccaatg atgacgatct ttcgggttgc cggtggcatg ctggacaaat cctcggtggc
     1021 agccagcagg cttgatcgtc gattgcgcga cggaggtgct tcgcgccagg gtttcgctgt
     1081 aacctcccct gggcttttat ccgccatgcg gcattgatcc ggatcaagcc aagggtagtc
     1141 gtcgaacctg agcaccggcg atcttgtttg atgcaagcga gcgggcggtg gtctggcccc
     1201 accagtggtt tgcgcattgc gcaccggtcg aggctccatt tcgtgattgt gtcgtggcgg
     1261 ctatgattgc acgggaaaaa agggaccgcc gccgatgagc ccatttgagt tggccgaacc
     1321 gacgtctctt ggccaggctt tggcgttact cgaccctaac gaccccaacg tacggccgtt
     1381 tgccggcggt actgcgttga tgctgctgat gaagtcgggc ctctacgtgc cgcggcggtt
     1441 ggtcagtctg cgccaggtcg ctgacggtat cgacggcatc cgcagcgtgg acggtggcgc
     1501 gctcgagatc ggcgccatgg tcccgctgtc ggcactgcaa cacgcgcccg aggtccggcg
     1561 tgcggcgccg tcgatcgcgg aaaccctcct cacgcattcc aatgtaaggg tgcgcaacgt
     1621 cgcgaccatc ggcggcaatc ttgcccatgc cgatccccat atggatctgc cgccattact
     1681 gatggcgctt gatgccatcg tgcgggttgc cggtccgcat ggcgagcgcc ggattgcggt
     1741 cgaggacttg tttgtttcgt acctggaaac cgtgctcgcc ggcgacgaat tgatcgttgc
     1801 actgattctg ccgccgcaac acggacggcg cgcaacctac cttaaatgca ctgcgcgtgc
     1861 ggccgatgac tggccggcac tcgggattgc tgcatcgttg gcaacccggg atggcatcgc
     1921 ggacggggtc cgtatcgcca tcggtgcggc caccgcaacg gcgatgcgat tgcctggcgc
     1981 tgaagccgtg ttggaaggga accgtctcga cgagcaatcg ctgcgtcagg cggcacgaac
     2041 cgccgcggct gaggctccgg tcattgccga ccagcatggc tcggccgcgt ataaacgcgt
     2101 cttggtcgag gtgtatgtcc ggcgtgcctt gctgcagatc tggcgggacg acgcgaaagg
     2161 acatggcaca tgagcgcggt gaccacacgc cagatcggcc gttctccacc acgtgtcgag
     2221 gcgcgcgcca aggtcaccgg cactgccgaa tacatccata atctgcggtt gccggggatg
     2281 ctgttcggca agatccaccg cagcacgatc ccgcacggcc gcatccagca catcgacacc
     2341 gctgccgcga tgacgctgcc cggtgtcgcg cggatcgtca ccggtgaaga catccggaaa
     2401 atcatcccgg tgccgtatta cgggccggcg tttcacgatc agccgatcct ggcgctcgaa
     2461 aaagtgcgct ttgccggaga gccggtggcg gtggccctcg ctgccgatcc gcatgtcgcg
     2521 gaaaccgcgg cacagacgat cgttgtcgaa tatgagccgt tgcctgccgt gttcgatgaa
     2581 gtcgaggcag tcagtgcgcc ggtattcgtg cacgatgaac tgaagccggc cggcaccttt
     2641 gccgacctga aacatttggc gggccggcgc gataccaaca tagcactcga ttttcatctg
     2701 cggcgaggcg atgccgatgc cgcattcgcc accgccgacc acgtcttcga acacacgttt
     2761 cgtacaccgc aacaaatgca cacgccgctc gaaccgcatg tctgcatcgc cgacgcacgt
     2821 aacgggtcgg taacgatcca cagttcgacc cagacgccgt ccttcgtacg gtcggaaatc
     2881 gcgcgtcttc tgggctggcc ggaaaaccgg gtcagggtca ggaccgcgtt cctcggtggc
     2941 ggcttcggcg ccaaggtcta cgtcaaactg gaagctttgg cggtcgcgct ctccttgctc
     3001 gccgcgcggc cggtgaaact ggcgttgacc atgtcggagc aattctttac catttcgaaa
     3061 catgccagca cgtttcgcat caagagcgcg gtga
//
LOCUS       DATAVD010000780         2612 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1375245, whole genome shotgun sequence.
ACCESSION   DATAVD010000780 DATAVD010000000
VERSION     DATAVD010000780.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2612
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1375245"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..566)
                     /locus_tag="VHX39_14905"
     CDS             complement(<1..566)
                     /locus_tag="VHX39_14905"
                     /inference="COORDINATES: protein motif:HMM:TIGR00567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HEX3992457.1"
                     /translation="MTSATVARVLDRAELPVDTVLLARFLIGKMLVRVLDEGLVGGRI
                     VETEAYDIGDAAGHAYRGLTPRNRALFLERGHAYVYLAYGISFMLNVSSETPGVGAGV
                     LIRAIEPTDGIAIMARNRGTERVRDLARGPGRLAMALGIDRRLDGIDLCQAGPLWIGA
                     GSQASEDVGQSKRIGITRAADSPLRFYVR"
     gene            complement(563..943)
                     /locus_tag="VHX39_14910"
     CDS             complement(563..943)
                     /locus_tag="VHX39_14910"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX3992458.1"
                     /translation="MDDDKIRQALNRHWAASDTNDFETEHDIYREDALLEYPQSGERI
                     RGRQNIQASRTAQPNAKRFTVRRIVGTGDLWVSEFIITYDGKPSYTVSIMEFLDGKVA
                     HETQYFGDPFAPGPSRAHLVERMG"
     gene            1029..1111
                     /locus_tag="VHX39_14915"
     tRNA            1029..1111
                     /locus_tag="VHX39_14915"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1062..1064,aa:Leu,seq:taa)
     gene            complement(1113..2003)
                     /locus_tag="VHX39_14920"
     CDS             complement(1113..2003)
                     /locus_tag="VHX39_14920"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HEX3992459.1"
                     /translation="MRDDLPVWRSLMFVPVTAEKFVRTGADRGADAIILDLEDAVAPS
                     QKEHARTLIAEAIPQVSRNGADVVVRVNRPWRLLVRDLEAAVIPGVAALMLTKVDSPE
                     HVLACAEIVAELEVERGLPAGGVKFIALVENAVGFFRIEQIAKSHPRVVGLSLGSEDF
                     AADVGMQSEPEGLFYPKQHTIFAARAAGILPMGFIGSIADFRDQEAFRAIVRRSRRLG
                     FMCASAVHPLQVSVLNDEFSPDEAEVERAERMIAAYDDAYAAGLGAVQFEGAMIDVPV
                     VERARSVVRRATALRGRVKG"
     gene            complement(2005..>2612)
                     /locus_tag="VHX39_14925"
     CDS             complement(2005..>2612)
                     /locus_tag="VHX39_14925"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3992460.1"
                     /translation="PLLEPMISVLGPEAAMYRVSGEKPQRTGSRSLTTSPRNVYGTSD
                     GRFIAISASIQAMAERLFRAIGRADMIDDPRFRTNTDRVRNIDECDGVVAAWIAERTQ
                     ADAMAVFEAAEVTATPIYEIDQLMDDPHVHARGVLVEVPDDEAGSVLMHNIIPRLSET
                     PGRLRSAAPALGQHTRSVLESIGYDADRLAALAADGVIKEG"
BASE COUNT          493 a         1017 c          686 g          416 t
ORIGIN      
        1 cggacgtaga accgcaacgg actgtcggcc gcgcgcgtaa tgccgatccg tttgctctgc
       61 ccgacatcct cggacgcctg gctgcccgct ccgatccaca gcggccccgc ctgacaaaga
      121 tcgatcccgt ccagccggcg atcgatcccc agcgccatcg ccagccgacc cggcccacga
      181 gccaaatccc gcacccgctc ggtgccccga ttgcgcgcca tgatcgcgat gccgtcggtc
      241 ggctcgatcg ccctgatcag cacacccgca cccacgcccg gcgtctcgct ggacacgttc
      301 agcatgaacg aaatgccata cgcgagatag acgtaggcgt gcccccgctc cagaaaaagc
      361 gcccgattgc gaggcgtcag cccgcgatag gcgtggccgg cagcgtcacc gatgtcatac
      421 gcctcggtct cgacaatgcg cccgcccacc aggccttcgt ccagcacccg caccagcatc
      481 ttgccgatca gaaagcgagc cagcagcacc gtatcgaccg gcaactccgc ccggtccagc
      541 acgcgtgcga ccgtcgccga tgtcatccca tacgctcaac cagatgcgcg cgggatggtc
      601 ctggtgcgaa cggatcgcca aagtattggg tttcatgcgc caccttgccg tccaggaatt
      661 ccatgatgct gacggtgtaa gatggctttc cgtcatacgt gatgatgaat tccgagaccc
      721 aaagatcgcc agtgcccacg atacggcgca ccgtgaaccg cttggcgttc ggctgagcgg
      781 tccgggaagc ctggatattc tgccgccccc tgatgcgctc gcccgattgc gggtattcga
      841 gcagtgcgtc ctctcggtag atgtcgtgct cagtctcgaa gtcattcgtg tccgaggcag
      901 cccagtggcg attgagtgcc tgtcgaatct tgtcatcgtc catccctgct actcccgttc
      961 ccggtcaccg cggtctggcc ggtcacccct ggcctccccg gacaagcccc ggtaaaagac
     1021 cagaatatgc ccgcctggcg gaatggtaga cgcagcggac ttaaaatccg cagttggaaa
     1081 cgacgtgccg gttcaagtcc ggcggtgggc attcacccct tcacccggcc acgcaacgcc
     1141 gtcgcccggc gcaccaccga tcgagcccgc tccaccacgg gaacgtcgat catcgccccc
     1201 tcgaactgca ccgcccccaa ccccgccgcg taggcgtcgt catacgccgc aatcatccgc
     1261 tccgcccgct ccacctccgc ctcatccggc gagaactcat cgttcagcac cgaaacctgc
     1321 aacggatgca ccgcgctggc gcacatgaac cccaaccgcc gggaccgccg cacgatcgcc
     1381 cgaaacgcct cctgatcccg gaaatccgcg atcgagccga taaaccccat cggcaggatc
     1441 cccgcggccc gagcagcgaa aatcgtgtgc tgcttggggt agaacagccc ctccggctcc
     1501 gactgcatcc ccacatcggc ggcaaaatcc tccgatccca ggctcagccc caccacccga
     1561 ggatgcgact tggcgatctg ctcgatccgg aagaacccga ccgcgttttc caccagcgca
     1621 atgaacttga caccccccgc cggcaacccc ctctcaacct ccagctcggc aacgatctcg
     1681 gcgcaggcca gcacgtgctc cggactgtcc accttggtca gcatcaacgc cgccacaccc
     1741 ggaatgaccg ccgcctccag atcgcgcacc agcaaccgcc acggccggtt cacccgcacc
     1801 accacatccg ccccattgcg ggaaacctga gggatcgcct cggcgatcag cgtcctggca
     1861 tgttctttct gcgacggcgc gaccgcgtcc tccagatcca gaatgatcgc gtcagccccc
     1921 cgatcggccc cggtgcgcac gaacttctcc gccgtcaccg gaacaaacat caaggaccgc
     1981 caaaccggca gatcgtcacg catctcaccc ctccttgatc acgccgtcag cggccaacgc
     2041 agccagccga tcggcatcgt atccaatcga ttccagcacc gaccgcgtgt gctgccccag
     2101 cgccggcgcc gccgaccgca accgccccgg cgtctccgac agccgaggga taatgttgtg
     2161 catcagcacc gatcccgctt cgtcatccgg cacctcaacc agcacccccc gcgcatgcac
     2221 atgcggatcg tccatcaact gatcgatctc atagatcggg gtcgccgtca cctccgccgc
     2281 ctcgaacacc gccatcgcgt ccgcctgcgt ccgttcggcg atccaggccg cgactacccc
     2341 gtcgcattca tcgatgttcc gcacccggtc ggtgttcgtc ctgaaccgag gatcgtcgat
     2401 catgtccgcc cgcccgatcg ctcggaacag ccgctccgcc atcgcctgga tggacgcgga
     2461 aatcgcaatg aatcgcccat cgctggtgcc atagacattc cgcggcgacg ttgtcagcga
     2521 ccggctaccc gtccgctgcg gcttctcgcc ggaaacccgg tacatcgccg cctccggccc
     2581 cagcaccgag atcatcggct ccagcaacgg ca
//
LOCUS       DATAVD010000781         6546 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_444936, whole genome shotgun sequence.
ACCESSION   DATAVD010000781 DATAVD010000000
VERSION     DATAVD010000781.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6546
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444936"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1079
                     /locus_tag="VHX39_14930"
     CDS             <1..1079
                     /locus_tag="VHX39_14930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_046205714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HEX3992461.1"
                     /translation="AGSNLLAMILFEKFGQHQPLNRQAERYALEGVPISLSTMADAVG
                     SSCAALDPVLKLVEQHVMAAERLHGDDTTVPVLAKGKTDTARCWVYVRDDRPFGGILP
                     PAAMFYYSRDRKGEHPQIHLAKYAGLFQADAFDGYRKLYLPERSAGSILEAACWVHAR
                     RRFFAMADLEENARRQAAGKKTIMLSPIAVEVVRRIDALFDIERTINGKSIQERRAAR
                     QELSRVLIDELQVYMREQRAKLSRGHDLAKAIDYILKRWAAFTLFLDDGRVCLSNNAA
                     ERALRGIALGRKSWLFAGSDRGGQRAAKMYSLIITAKMNNIDPHAWLADVLARIAGHP
                     AHRLDELLPWNWKPAASAIAAVAA"
     gene            1082..1282
                     /locus_tag="VHX39_14935"
     CDS             1082..1282
                     /locus_tag="VHX39_14935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992462.1"
                     /translation="MAPVNKVHHVNTIARVAEMLGEDEDWLWDVANEMDQEDGQIWVY
                     GVGDDWQAPNEWSNSYVVNLVI"
     gene            complement(1266..2434)
                     /locus_tag="VHX39_14940"
     CDS             complement(join(1266..2170,2170..2434))
                     /locus_tag="VHX39_14940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611716.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HEX3992463.1"
                     /translation="MPRKIYKPEEIIAKLRQVEVLTSQGKSAVDAIRSIGVTDATYYR
                     WRQEYGGLKVDQVKRLKELEAENTRLRRAVSDLTLEKLVLKEAAFGKLLSPARRRDCV
                     KRVVETLGVSERFACRVLGQHRATQRGAPQTADDEAALTADIIALAREFGRYGYRRIT
                     IMLRHAGWLVNKKRVERIWRSEGLKVPQKQPKRSRLWLNDGSCTRLRAERPNHVWAYD
                     FVEGRTHDGRKIRMLNIVDEFTREAMAIRVSRRLNSTDVIDVLSDLFILRGVPTHIRS
                     DNGPEFIAKAVQAWITAVGAQTAYITPGSPWENGYIESFNARLRDEFLNGEIFYTLQE
                     AQVLIEAWRGHYNTRRPHSSIGYRPPAPEVLLWPTPPAALNRAARPNESSLKSPN"
     gene            2586..3065
                     /locus_tag="VHX39_14945"
     CDS             2586..3065
                     /locus_tag="VHX39_14945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992464.1"
                     /translation="MLEGAIKTVWIKPGIAGCITLSAVLGALALVPAARAAEIGSLPP
                     AYAPGGTIGIAKGALPPAGLYWEQTSAYANLQAVNGEGERTGAATNAYFTISTFVWST
                     DYYLLGARYSAFIANAGLYNLSLRTAQGSVSSTTSLGDVEPRPSPALRTIPRPFSSA"
     gene            3062..3406
                     /locus_tag="VHX39_14950"
     CDS             3062..3406
                     /locus_tag="VHX39_14950"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEX3992465.1"
                     /translation="MNRRSFQHDTFKDMGFLCVNILTCEDEHLSPVFAGKDNLSMPER
                     FSRAKWLRLVTGAPALESAAAVLDCNVTQIVVVGTHSVMFCTVQAIHLGSESSGLVYH
                     GRRYHKILSQAG"
     gene            3795..4883
                     /locus_tag="VHX39_14955"
     CDS             3795..4883
                     /locus_tag="VHX39_14955"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX3992466.1"
                     /translation="MATPNGSPRKWRIPKIPRFVWRALSFVLAAAVLIVCDTQWNRWE
                     GEARYQTTDDAYLQTNLTPLSAQVSGYVRAVPVQDYAQVRAGQLIVEIVDDDYRARLA
                     QAVANAASAKAKIAEVEAQHPLLEANLRAAQAVVAATTATLAQNGRDVARQHKLLNTG
                     SSSVEELERVQTTRAQLTAQLDQNRAQADAVVRQIDLLAAQLDQAEAALAAAEAAVRL
                     AAINLGYTHITAPTDGFIGLRQVLPGQYLAAGTQVTTLAALPLIWVIANYKETQLTRV
                     RIGQPATITVDTYPGHTLHGHVIAIAPASGAQFALLPPDNATGNFTKIVQRIAVKISI
                     DDADGLGGRLLSGMSAIPTIDTAARRQP"
     gene            4889..6466
                     /locus_tag="VHX39_14960"
     CDS             4889..6466
                     /locus_tag="VHX39_14960"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992467.1"
                     /translation="MTTPQPAPPAEQAIPWLGLTAVLLGTFVSTLTGRLSTFGLADVR
                     GAIHAGFDDGAWITTAFTVAQMLITPVAVWIGSIYGPRRILIVAALEFALTSFLLPFS
                     QNLTTFLVLQFLAGLGSGCFIPLTLSFILRNMPPRLWAYGVALYALNLELSLNISASL
                     EGWYVDNLSWHWIFWQNVPLALGMAACLFWGVRSLPPPPRIHTDGYGLISCGLGLALI
                     YAALDQGNRLDWGSSGLIWGLTLAGIIMIVAFVVHGRTTPDAWLDFKVAAAWPLPLLL
                     LMIAILRLTILSTSYLIPYYLGGVRGFRALQVGDTLIWIAVPQLIICPLAAFMLRRSD
                     PRITASLGLCLVGLACMMGAYSLTPSWGSDQFLPSQLMQAVGQSFALSGIVFTGVLNL
                     KPQDALSFGAMLQIARLFGGEAGTSFITTMARMREQRASNLIGQHLQIGSHDVQQRLA
                     IYGHVVTRAGHQPAAAPLILGNLVRTMATTQATIDCFVAVAAFAVFGLVVLLLVLPAP
                     PRSPASHIPLFSRKDAG"
BASE COUNT         1223 a         2052 c         1903 g         1368 t
ORIGIN      
        1 gggcaggatc gaatctgctg gcgatgattc tgttcgagaa attcggtcaa catcagcctt
       61 tgaaccggca ggccgagcgt tacgcgctgg aaggcgtgcc gatcagccta tcgacgatgg
      121 ccgacgctgt ggggtcgagc tgcgcggcgc tggatcctgt gctgaagctt gtcgaacagc
      181 acgtcatggc ggccgaacgc ctccatggag atgacaccac tgtgccggtg ctggccaaag
      241 ggaagaccga taccgctcga tgttgggtct atgtgagaga tgacaggccg ttcggcggaa
      301 tattgccacc ggcggcgatg ttctattatt cgcgcgaccg caaaggcgag catccgcaga
      361 tccatttggc caaatatgcc ggcctcttcc aggctgatgc ctttgacgga taccgaaaac
      421 tctaccttcc tgagcggagc gccggttcca tcctggaggc agcatgttgg gttcatgcca
      481 gacgtcggtt tttcgcgatg gctgatcttg aagaaaacgc caggcggcag gctgctggca
      541 aaaagacgat catgctttct cctatcgcag tcgaggtcgt gcgccgcatc gatgccctgt
      601 tcgacatcga gcgcaccatc aatggcaaga gcatccagga acgaagggct gctcgccagg
      661 agctgagcag ggtgctgatc gatgagcttc aagtttacat gcgcgagcag cgtgccaaac
      721 tttcccgagg tcacgacctt gccaaggcca ttgactatat cctcaagcgc tgggccgcct
      781 tcaccctgtt ccttgacgat gggcgtgtat gcttatcgaa caatgccgcc gaacgcgcgt
      841 tacgcggcat agccctgggt cgaaagtcat ggttgttcgc tggttccgac cgcggtgggc
      901 aaagggcggc aaaaatgtat agcctcatta ttacggccaa gatgaacaat atcgatcctc
      961 atgcctggct ggcggatgtc cttgcgcgga tcgcgggcca ccccgcgcat cgtctcgatg
     1021 aattattacc ctggaattgg aagcccgcgg catcagctat cgccgccgtc gcggcctgac
     1081 tatggcccca gtcaacaaag tccaccatgt caacaccatc gcccgcgtcg ccgagatgct
     1141 cggcgaagat gaagactggc tttgggacgt cgccaacgaa atggaccagg aggacggcca
     1201 gatctgggtc tacggcgtcg gtgacgattg gcaagccccc aatgagtggt ccaattcata
     1261 tgtagttaat ttggtgattt gaggctggat tcatttgggc gggcagcgcg atttaaagcg
     1321 gctggcggcg ttggccacaa taaaacctct ggtgctggcg gcctgtaacc aatcgatgag
     1381 tgtggccggc gcgtgttgta gtggccacgc caggcttcga tcagcacctg tgcctcctgc
     1441 agcgtgtaga aaatctcgcc attcaggaat tcatcccgca atcgggcatt gaaactttca
     1501 atgtagccgt tctcccaggg gctgccaggc gtgatataag ccgtctgagc acccacggcc
     1561 gtgatccaag cctgtaccgc cttggcgatg aactcagggc cgttatctga cctgatatgc
     1621 gtaggcacgc cgcgcagaat gaataggtcg gagagaacat cgatgacgtc ggtcgaattc
     1681 aggcgccggg atacccggat cgccatggct tctcgggtaa attcgtcaac gatgtttaac
     1741 atccggatct tgcgcccgtc atgcgtgcgg ccctcgacaa aatcataggc ccagacatgg
     1801 ttaggccgct ccgcccggag gcgtgtgcac gaaccgtcat tcaaccataa acgtgaacgt
     1861 ttgggctgct tttgtggaac cttgaggccc tcgctgcgcc agatccgttc gacccgtttc
     1921 ttgttcacga gccagcccgc gtgccgcagc atgatcgtga tgcgccggta tccgtagcgg
     1981 ccaaattctc gcgccaacgc gatgatgtcc gctgtcagcg ccgcttcatc atcagccgtt
     2041 tggggcgccc cgcgctgtgt cgcccgatgt tgacccagca cgcggcaggc aaaccgttcc
     2101 gagacgccga gcgtctcaac aacgcgtttc acgcaatccc ggcggcgcgc cgggcttagt
     2161 agtttcccga ggcggcttcc ttcaaaacca gtttctccag cgtcaggtca gacactgcac
     2221 gccgcagccg ggtgttctcc gcctccaact ccttcagccg cttcacctga tcgaccttca
     2281 gcccgccata ctcctggcgc caccgataat aggtcgcatc cgtcacgccg atcgatcgga
     2341 tcgcgtccac cgctgatttg ccctgtgaag tcaaaacctc aacctggcgc aacttcgcta
     2401 taatctcctc aggcttgtaa atcttccgcg gcatcgttga ccctcccacc aaaagctaca
     2461 tcaaaggtgg acaagttcta agggggcaga ccagtgggaa gctgattgtc ggctagacaa
     2521 tgtttgtatg attatcatat aggatgcaca acatactaca ataagaatat gtgattgggg
     2581 agcggatgtt agaaggcgct ataaaaactg tctggatcaa gccgggaatt gccggatgca
     2641 taacgctgtc cgcggtgctc ggcgctttgg ctctggtgcc agccgcccgc gcggcagaga
     2701 tcggtagcct gccaccggcg tacgcgccgg gcggaaccat cgggattgcc aagggggctc
     2761 ttccacctgc gggcctttat tgggagcaga cttccgcgta cgcgaacctg caagctgtca
     2821 atggcgaagg tgagcgtacg ggcgccgcca ccaacgcgta tttcaccatc tccacgttcg
     2881 tctggtcgac cgactattac cttctgggcg ctagatatag cgcttttatc gccaacgccg
     2941 gcctctataa tctctcgctt cgtacggctc agggcagcgt ttcttcgacc acaagcctgg
     3001 gcgatgtgga gcctcggccg tctccagcgt tacggacgat cccgcgacca ttctcgtctg
     3061 catgaatcgt cgcagctttc agcacgatac tttcaaggat atggggtttc tctgcgttaa
     3121 catcctcacc tgcgaggacg agcacctctc gccggttttt gcgggtaagg acaatctgtc
     3181 tatgccagaa cgcttttccc gcgcgaaatg gctgcgtctg gtcaccggcg cgccggcact
     3241 ggagagcgcc gccgccgttc tggactgcaa cgttacccag attgtcgtgg tcggcaccca
     3301 tagcgtgatg ttctgcaccg tgcaggcgat ccatctcggc agcgaaagct ccggtctcgt
     3361 ctatcatggc cgaaggtacc ataagatcct aagccaagcc ggttgagcgg cacttcgcaa
     3421 aattatgcag gacggcgcgg ccgaccgggc cgtatggcca tattcccttc cgcttgcggc
     3481 atgatggata tgtccgttca ggatcgtcac cgacccgaag cggcgcagcg ccgccagtgc
     3541 cgctggcgca tcgcccgtgc cctttgacgg cgccgcgcac tgtgcagcgg caggctcaag
     3601 gctgacaggc ttacgtgccg ttgaaagatg cgcacggccg ccaaagtaag gttaaaacat
     3661 atggttgcgc gatcccgcga cggttgtgca tcaccgaacg ctgtttgttg agttgcaata
     3721 tctatccaat tcctggatcg tatcgcttaa cgatgccggg ctgaccggta aacgacgtcg
     3781 caggcgggca caaaatggca acaccaaacg gttcgccacg aaagtggcgg attccgaaaa
     3841 ttcctcgctt cgtttggcgg gctctgagtt ttgtgctggc ggccgcggtc ctcatcgtct
     3901 gcgacaccca atggaaccga tgggaaggcg aagcgcgcta ccaaaccacc gacgacgcct
     3961 atctgcagac caacctcaca ccgctcagcg cccaggtttc gggctatgtc cgcgccgtcc
     4021 cggtacagga ttacgcccag gtgcgtgccg gccaactcat cgtggagatc gtcgatgacg
     4081 attaccgtgc gaggcttgcc caggcagtgg ccaatgccgc ctccgccaaa gcgaagatcg
     4141 cggaggtgga ggcgcagcac ccgctccttg aggccaatct ccgggcagcg caggcggtcg
     4201 tcgcggccac caccgccacc ttggcgcaaa acggccgtga cgttgcccgg cagcacaagc
     4261 tcttaaatac cggttcgtcc tcggttgaag agctggaacg ggtgcaaacg acccgcgccc
     4321 agttgacggc gcagcttgac caaaaccgtg cccaggctga cgcagtggtg cggcagatcg
     4381 accttctggc agcgcaactt gaccaggccg aagccgcatt agccgcggcg gaggccgccg
     4441 tgcggctcgc cgcgatcaat ctgggctaca cgcatatcac ggcacctacg gatgggttca
     4501 tcgggctgcg gcaggttttg cccggacaat atctggcggc cggcactcag gtcacgaccc
     4561 tggcggcgct accgctcatc tgggtgatcg ctaattacaa ggaaactcag ttaacccgtg
     4621 tgcggatcgg ccaaccggcc acgattacgg tcgatacgta tccggggcat acactgcacg
     4681 gccatgtcat tgccatcgcg ccggcatcgg gtgcgcaatt cgccttgctg ccaccggaca
     4741 atgccaccgg caacttcacc aaaattgtcc aacgcattgc cgtaaaaatc tccatcgacg
     4801 atgcggacgg gctaggcggc cggctgctct ccggcatgtc cgccatccct acgatcgaca
     4861 ctgctgcccg ccggcagcca tgagcggaat gaccacgcca cagcccgccc cacccgccga
     4921 acaggccatt ccgtggctgg gcctcaccgc cgtactgctc ggcacgttcg tctccacgtt
     4981 gaccggacgg ctctcgacct tcgggctcgc cgatgtccgc ggcgccatcc atgccggctt
     5041 cgacgacggc gcctggatca ccacggcgtt caccgtcgcg caaatgctga tcacgccggt
     5101 cgcggtgtgg atcggcagca tctacggccc gcgccggatt ctcatcgtcg ccgcgctcga
     5161 atttgcgctc acgtcttttc tgctgccgtt ttcgcaaaac ctcacgacat ttctggtcct
     5221 gcagtttctc gccgggctcg gctcgggctg tttcattccc ctgacgctga gctttatctt
     5281 gcgcaacatg ccgccccggc tttgggccta tggcgttgcg ctctatgcac tgaacctgga
     5341 gctgtcgctc aacatctcgg catcgctcga gggctggtac gtcgacaacc tctcctggca
     5401 ctggattttc tggcagaacg taccgctggc gcttggtatg gccgcctgcc tgttctgggg
     5461 cgtgcgctca ctgccgccac cgccgcggat ccacactgac ggctatggcc tgatttcatg
     5521 cgggctcggc ttggccctga tctacgccgc gctcgaccag ggcaaccggc tcgactgggg
     5581 gagttccgga ctgatctggg gtttaaccct cgctgggatc atcatgattg tcgcgttcgt
     5641 ggtccatgga cgcacaacgc ctgatgcgtg gctggatttc aaagtcgcgg cggcgtggcc
     5701 attgcccctt ctgcttctga tgattgccat cctgcgcctg acgatcctct cgacctccta
     5761 tctcatcccc tattatctgg gcggcgtccg cggtttccgg gcgctgcagg tcggcgatac
     5821 gctgatctgg atcgccgtac cgcaactcat catctgcccc cttgccgcct tcatgctgcg
     5881 ccgctccgac ccgcgcatca ccgcctcact gggcctctgt ctggtcggcc tggcctgcat
     5941 gatgggtgcc tacagcctga ccccgtcctg gggatcggat cagtttttgc cctcgcagct
     6001 gatgcaggcg gtcggacaaa gctttgccct gtcggggatc gttttcaccg gcgtgctcaa
     6061 cctcaagccg caggatgcat tgtccttcgg cgcgatgctg cagatcgcgc ggctgtttgg
     6121 cggcgaggcg ggcacgtcgt ttattacgac catggcccgg atgcgtgagc agcgcgcttc
     6181 taatctcatc gggcagcatt tgcagatcgg cagccacgac gtgcaacagc ggctcgcgat
     6241 ctatgggcac gtggtcaccc gtgccggtca tcagccggcc gctgcgcccc tgatcttagg
     6301 caatctggtg cggacgatgg caaccactca ggcgacgatc gactgcttcg tcgccgtcgc
     6361 ggcttttgcc gtgttcggac tcgtcgtgct gctgctggtt ttgccagccc cgccgagatc
     6421 tccagcctca cacataccac tcttctcacg aaaggacgcg ggatgaggct ggcgcaatat
     6481 gctgcgccct ttgccgcctt ggcttggctc gccggttgcg cggtgggacc gaactacaag
     6541 cccccg
//
LOCUS       DATAVD010000782         2843 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2305730, whole genome shotgun sequence.
ACCESSION   DATAVD010000782 DATAVD010000000
VERSION     DATAVD010000782.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2843
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2305730"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..799)
                     /locus_tag="VHX39_14965"
     CDS             complement(<1..799)
                     /locus_tag="VHX39_14965"
                     /inference="COORDINATES: protein motif:HMM:NF044428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992468.1"
                     /translation="MTELHWLPEIPDWRARLRGLASEPGTLWDNAVALAGARINFVLT
                     NALDETLRRLLSRAPEGLPTTPVRLAVLGSSTLTHLLPSIRVAGLRRNIWIDTYENDY
                     GQYWQELSDPGSALHEFGPTAVLLALDAHDLTAGVTASMDAEAAEVTMAEVTDRIRAS
                     WRLARETLHCPVLHQAALPLHLPLLGNNEHRLAGSRAAFLRRLNACVRTMAEAEGVDI
                     IAIDDRAATDGLRAWHDPGLWHRAKQEISHTAAPMYGDLVGRWVAAKQ"
     gene            complement(978..1829)
                     /locus_tag="VHX39_14970"
     CDS             complement(978..1829)
                     /locus_tag="VHX39_14970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEX3992469.1"
                     /translation="MTGREGGANLQPAGITPVVVLVRPQLADNIGACARAMGNGGLFE
                     LRLVAPRDGWPQPKAWANSSGADRILDAASVHVSVADAVADLHHVLATCPRPRHIIKP
                     VLTARGAAAELRAIASRGLRAGVLFGPERAGLDNDDMAHADTLVRYPLNPGFMSLNLA
                     QAVMIMAYEWWTAAEETPPHEFMTNETLVANKATLENFLVHLTAELDASGFLRNLPKR
                     PGMVRNIRHFFERGEVTEQELRTLHGIVTELSTGRRQRGREEPAVGDDADDLRPAPGS
                     RQAGRIV"
     gene            complement(1826..2185)
                     /locus_tag="VHX39_14975"
     CDS             complement(1826..2185)
                     /locus_tag="VHX39_14975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992470.1"
                     /translation="MKKLLFILVLGFGGAMLFKSGQVTATPDRHIQVAGYQVPLPDAV
                     QNSPVYGMVIEQLPQAASKVAASPGAPARPLMPIVSSANGSFNANTSGSASTSRGGPA
                     TGADGFSAAAKALRGSQ"
     gene            complement(2201..>2843)
                     /locus_tag="VHX39_14980"
     CDS             complement(2201..>2843)
                     /locus_tag="VHX39_14980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007282517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DALR domain-containing protein"
                     /protein_id="HEX3992471.1"
                     /translation="ENEIAQSVCAFPGSQFARYWVHNGMLLVNGEKMAKSLGNFTTLR
                     DALKLVPGEVIRFLLIRTHYRSTPDFSEAATIEAKKELDRFYRALERCPDAGGGTVPD
                     TVLNALCDDLNTPLAFSAMHALADAALAGDAEAAANLRASGHLIGLLTQAPDAWFRGG
                     IDGANAIEAAIQERLDARRARNFTRADAIRADLAERGIVLEDGPGGTTWRRAQ"
BASE COUNT          522 a          906 c          889 g          526 t
ORIGIN      
        1 cctgcttcgc tgcgacccac cgtccgacca ggtcgccata catcggggcg gcggtatgac
       61 tgatctcctg ctttgcgcga tgccacaagc ccggatcgtg ccaggcacgc aagccatccg
      121 tcgcggcgcg gtcatcgatg gctatgatat cgacaccctc cgcttcggcc atcgtccgca
      181 cacatgcatt gagccggcgc aggaacgcgg cccgcgaccc ggcgaggcgg tgttcgttgt
      241 tgcccaaaag cggcaaatgc aacggtaaag cagcctggtg cagcaccggg cagtgcaaag
      301 tctcgcgagc cagccgccag ctggcgcgga tccgatcggt aacctcggcc atcgtcactt
      361 cggcggcttc ggcgtccatg gaagcggtaa caccggcggt caggtcgtgc gcatccagag
      421 ccagcaggac cgcagtcggg ccgaattcgt gcagggctga accggggtcg gacaattcct
      481 gccaatattg gccgtagtcg ttctcgtaag tgtcgatcca gatgttgcgg cgcagaccgg
      541 ccacacggat ggagggcagt aaatgcgtca gtgtgctgga gcccagtact gccagtcgca
      601 ccggtgtcgt tggcaggcct tcaggagcac gggacagcaa acggcgtagt gtttcgtcca
      661 gcgcattcgt cagcacaaaa ttgatccgtg caccggcgag agcgacggcg ttatcccaga
      721 gtgtgccagg ctcggacgcc aggccgcgca aacgggcgcg ccaatccggg atttccggca
      781 accagtgcag ctctgtcacc tcatgccttc catgtcagca ttgtttgact gcaaggccac
      841 gtccgccgag cacaaagcta tggcctgagg actttggccg ccgagcgtgt gcggcctcat
      901 accaacgatc agtcgccggc ttccaggaag aacgcatcgg ccaaccgaat taacgctcgc
      961 ttgtgggcat ggagcggtca gacaatgcgt ccggcctggc gggatcccgg cgcgggtcgc
     1021 aggtcgtcgg cgtcgtcgcc cacagcaggc tcctcgcggc cacgttggcg gcgtccagtc
     1081 gagagttcgg tcacgatgcc gtgcaatgtc cggagttcct gttcggtcac ttcaccgcgc
     1141 tcgaaaaagt ggcgaatatt gcgaaccatc ccgggccgtt tcggcagatt gcgcagaaag
     1201 ccgctggcgt ccagttcggc ggtcaggtgc accagaaaat tctccagcgt cgccttgttc
     1261 gccaccaatg tttcgttggt catgaactcg tgtggcggcg tttcctcggc cgccgtccac
     1321 cattcgtacg ccatgatcat caccgcctgg gccaggttca gcgacatgaa acccgggttc
     1381 aagggatagc gaaccagcgt gtcggcatgc gccatgtcat cgttgtcgag gccggcacgc
     1441 tccggcccga acagcacgcc agcgcgcaga ccgcgggaag cgattgcccg cagttcggcc
     1501 gcggcgcccc gggccgtcag cacgggtttt atgatgtgac gcggtctcgg acaggtggcg
     1561 aggacatgat gcaggtccgc gaccgcgtca gccacactga cgtgcacgga ggcggcatcg
     1621 aggatccgat ccgctcccga actgttcgcc caggctttgg gctgtggcca gccgtcgcgg
     1681 ggggctacga gacggagctc gaacagtccg ccatttccca tcgcccttgc acaagcgcca
     1741 atgttgtcag cgagttgcgg acggaccagc acgacgaccg gcgtgatgcc ggccggctgc
     1801 aggtttgcac cgccctcgcg tcctgtcatt gcgatccgcg taacgccttg gccgctgcgc
     1861 tgaacccatc cgcaccggtt gccggaccgc cccgtgatgt actggcactg cccgatgtgt
     1921 ttgcattgaa gctgccattt gccgaggaca cgatcggcat cagaggccgc gccggcgcac
     1981 cgggtgatgc ggcaaccttc gaagcggcct gcggcaattg ctcaatcacc atcccgtaaa
     2041 ccggtgagtt ttggacggcg tccggcagtg ggacctgata gccggcgacc tgaatgtgcc
     2101 gatccggggt agcggtcacc tgaccgcttt tgaacaacat ggcaccgccg aagccgagta
     2161 cgaggataaa cagcagtttc ttcattggaa atcctttggg ttattgcgcc cgccgccagg
     2221 tggtgccgcc cggtccgtcc tccaggacga tcccgcgttc ggcgaggtcg gcccggattg
     2281 catcagcccg cgtgaaattc cgggccctac gcgcgtcgag acgttcctgg attgctgctt
     2341 caatcgcgtt ggcaccatcg atgccgccgc ggaaccaggc atcgggcgcc tgggtcagca
     2401 agccgatcaa atgcccggaa gcccgcaagt tggctgccgc ctcggcgtca cctgcgaggg
     2461 ctgcatcggc cagcgcatgc atcgccgaga acgcgagcgg ggtattcagg tcgtcgcaca
     2521 gggcattcag caccgtatcg ggcacggttc ctccgccagc gtccgggcat cgttccagcg
     2581 cacgataaaa tcgatcgagt tcctttttcg cttcaattgt cgctgcctcg ctaaaatccg
     2641 gggtcgaacg gtaatgggtg cggatcagca aaaaccgaat aacctcgcct ggcaccagct
     2701 tcagcgcgtc gcgcaaggtg gtgaaattgc cgagtgattt ggccattttc tcgccgttga
     2761 cgagtaacat gccattgtgg acccagtagc gcgcaaactg gctgccggga aacgcgcaca
     2821 cactttgcgc gatctcattt tcg
//
LOCUS       DATAVD010000783         3702 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2679896, whole genome shotgun sequence.
ACCESSION   DATAVD010000783 DATAVD010000000
VERSION     DATAVD010000783.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3702
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2679896"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            177..2240
                     /locus_tag="VHX39_14985"
     CDS             177..2240
                     /locus_tag="VHX39_14985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011251808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX3992472.1"
                     /translation="MTNRTRLAIDIGGTFTDLVLSLPNRTLSKKLLTTHDHPDTAVIE
                     GARSILAEAELSASQLDLVIHGTTLATNALIERKGARTALLTTRGFRDSLEMAYEHRF
                     EQYDLYMERPAPLVSRDLRFEVAERLAADGSLLLPLDEAGLQPVIAMLRKANIEALAI
                     SFLHAYVNPKHEERAGAIIAAALPDLAITLSHEVCREIREYERTSTTVANAYVLPLMS
                     HYLRDMRDGLAALGATCPLLLMMSSGGICTIETARRFPVRLVESGPAGGVILARRIAA
                     RGGYDRALSFDMGGTTAKITLIDDYTPQQSRHFEVARAYRFAKGSGIPVRIPVIDMVE
                     IGAGGGSIARVDSLRRIVVGPDSTGSDPGPACYDRGGDRATVTDADVVLGGIDPVGFA
                     GGSIALSPDKAAAAITKSITLDMTVPEAARGIAEIVDETMASAARVHAVENGKDTAGR
                     TLIAFGGAAPLHAARLAGKLGIQRVVIPPDAGVGSAHGFLDAPIAYEVVRTLVVRLGL
                     LDQPKIDTMFAEMRAETEAVVRLGAPAGDLQETRTAYMRYRGQGHEIAVPFPAGNADP
                     ATLRTAFDTTYTALFGRTIPRLEIEVVTWTLALAQRHDRPERVTQPVRTGPTEPIGTR
                     RLVESATGCVVTSHIYTRKALDPGTTLIGPAVILEDGTTTIVPTAHTASIGADREIII
                     EGPRA"
     gene            2237..>3702
                     /locus_tag="VHX39_14990"
     CDS             2237..>3702
                     /locus_tag="VHX39_14990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX3992473.1"
                     /translation="MSGRNIDEIELQIMWNRLLSVVEEQAQTLVRTAFSTSSREAGDI
                     SAGVFDLEGRMLAQAVTGTPGHINTMARSVGHFLEVFPVSQMQEGDVYVTNDPWKGTG
                     HLYDLVVVSPTFMDGRIVGLFASTAHLVDMGGVGQTPEGRQIWHEGLFIPLLRLARAG
                     EMNEDLLAMIRANVREPVQVIGDVYALIACNEIGGRRLIAMMREFKLHDVDQLGGEII
                     QRSRRAMTEAIQKLPKGSWTSSMRVDGYEAPIDIVGRVTIADDTIHVDFTGTSGMSSY
                     AINCPICYTEAYTTFGVNCVVAPHVPNNAGSLAAVKVTAPPGTVLSAEYPAAVYARST
                     MGHLLPDVVYGCLDQAIPGRVPAEGTSNLWSLKLIAGHGLTGIGGKAGTQFMTMSFHS
                     GGAGARPHQDGLSATPFPSGVRNVPVEATEAITPLVIWRKELLPDSGGAGRQRGGLGQ
                     VMEVGSREDAAFGLFASFERVKYPARGRNGGGPGAKGSV"
BASE COUNT          688 a         1147 c         1141 g          726 t
ORIGIN      
        1 agatggtaca catgaaagcc cagggccatt tcgccttgta gcattttgcg tttcgcggca
       61 ttgctggtga ttggcatgac gtgtcctccg attgacgccg cacgccagca cggtccggcg
      121 catcccgtca aaccaaccgg cttgccggga ccgtcggcct catgagagac tccgacatga
      181 ccaatcgcac gcgccttgcc atcgacatcg gcggcacctt caccgatctc gtgttgtccc
      241 tgccgaaccg gacattgtcg aaaaaactgc tgaccacgca cgaccatccc gacaccgcag
      301 tgatcgaggg cgcacgatcg atcctcgccg aggctgagct ctccgcctcg caactcgacc
      361 tggtcatcca tggcacgacg ttggcgacca atgcgctgat cgagcgcaag ggcgcacgca
      421 ccgcactgct gaccacacgc ggtttccggg actcactgga aatggcgtac gagcaccggt
      481 tcgaacaata cgatctgtat atggaacggc ctgccccgtt ggtttcccgg gatttgcgct
      541 tcgaagtagc agagcgtctg gcagcggatg gttcgctgtt gttgcccctg gacgaggccg
      601 ggctgcaacc cgtcatcgca atgcttcgca aagcaaatat cgaggccctg gcaatcagtt
      661 tcctccacgc ctacgtcaac ccgaagcatg aggaacgcgc cggagcgatc attgccgctg
      721 cgttgccgga ccttgcaatc accttgtccc acgaggtgtg ccgcgaaatt cgcgaatatg
      781 agcggacgtc aacgaccgtc gccaatgcct atgtcctacc gctgatgtcg cattatctac
      841 gggacatgcg tgacggcctc gccgctttgg gagcgacctg tccattattg ctgatgatgt
      901 cctccggcgg catttgcaca atcgaaacgg cacgccgctt tccggtgcgc ctggttgaaa
      961 gcgggccggc aggcggtgtc atcctggccc gtcgcatcgc ggctcgcggt ggctacgacc
     1021 gcgcgttgtc gttcgacatg ggcggcacga cagcaaagat cactttgatc gacgattata
     1081 ccccgcaaca atcccgccat ttcgaagttg ctcgcgccta ccgtttcgcc aaaggcagcg
     1141 gcattccggt gcgcattccg gttatcgaca tggtcgagat tggtgccggt ggcggttcga
     1201 tcgcgcgcgt tgattcactc cgccgcatcg ttgtcggtcc cgacagtacc ggctccgatc
     1261 ctggaccggc ttgctacgac cgaggcggcg accgggccac ggtcaccgat gccgatgtcg
     1321 tacttggcgg catcgatcct gtcggtttcg ccggcggttc catcgcgctc agccccgaca
     1381 aggcggcggc cgccatcacc aaaagtatca cgctggatat gacagtacct gaggcggcgc
     1441 gtggcatcgc tgagatcgtc gacgaaacca tggccagtgc cgcgcgagtg cacgccgtcg
     1501 aaaacggcaa ggacaccgct ggccgcacgc tgattgcctt cggcggtgct gcgccgctgc
     1561 atgccgctcg cctcgccggc aaactcggta tccaacgcgt tgtcattccg cccgacgctg
     1621 gcgttggttc cgcgcatggc ttcctcgacg caccgatcgc ttacgaagtc gtgcgcactc
     1681 tggtcgtgcg tctgggcttg ttggatcaac caaaaatcga cacgatgttc gccgagatgc
     1741 gtgcggagac cgaagcggtg gtccggcttg gtgcacccgc cggcgatctt caggaaaccc
     1801 gcaccgccta tatgcgctac cgaggccagg gtcacgaaat cgcggtgccg tttcctgccg
     1861 gcaatgccga ccctgcaacg ttacgtactg ccttcgatac gacctataca gcgctgttcg
     1921 gacgtaccat tccgcgtctg gaaatagaag tggtgacctg gacgctcgct ctggcgcaac
     1981 gtcatgaccg gccggaacgc gttactcagc ccgtccgcac cggacctacg gaaccgatcg
     2041 gcacccgccg tctcgttgag tcggcaaccg gatgcgtggt tacgtctcac atctacaccc
     2101 ggaaagcgct ggatccaggc acgactttaa tcggtcccgc ggtgatcctg gaggacggca
     2161 ccacaaccat cgtgcccaca gcccacactg catcgattgg tgccgatcgc gaaatcatca
     2221 tcgaaggacc ccgcgcatga gcggccgaaa catcgacgaa atcgaactgc agatcatgtg
     2281 gaaccgtctg ctctcggtgg tggaggaaca ggcgcaaact ctggtgcgca ctgcgttcag
     2341 cacgtcgtcg cgtgaagccg gcgatatttc cgctggggtg ttcgatctcg aaggccggat
     2401 gctggcccag gcggtgacgg ggacaccggg tcatatcaat acgatggcga ggtcggtcgg
     2461 gcattttctg gaggtgttcc cggtctctca aatgcaagaa ggcgatgtct acgtcaccaa
     2521 cgatccgtgg aaaggcaccg gccatttgta cgatctcgtc gtcgtgtcgc cgacctttat
     2581 ggacggccgc atcgtcggcc tgttcgcaag cacagcgcac cttgttgaca tgggcggtgt
     2641 cggccagacc ccggaaggcc gccagatctg gcatgagggg ttgttcattc cactgttgcg
     2701 gctcgcccgc gccggcgaaa tgaacgagga cctgttggcg atgatccgcg ccaatgtgcg
     2761 cgagcctgtg caggtcatcg gcgacgtcta cgcgttgatc gcctgtaacg aaatcggcgg
     2821 tcgccgtctg atcgccatga tgcgcgagtt caagctgcac gacgtcgatc aactgggcgg
     2881 cgaaatcatt caacgcagcc ggcgcgcgat gaccgaggcg atccagaaac tgccgaaggg
     2941 ctcctggacg tcctccatgc gcgttgatgg ttatgaagcg ccgatcgaca ttgtcggccg
     3001 cgtgacgatt gccgacgata cgatccatgt cgatttcacc ggcacgtcag gcatgtcgtc
     3061 gtacgcgatc aactgtccga tttgttacac cgaggcgtac acaacgttcg gtgtaaactg
     3121 cgtcgtagcg ccgcacgtgc cgaacaacgc cgggagtctg gcggcggtga aggtaaccgc
     3181 tccgcccggc accgtgctca gtgcggaata tccggccgcg gtttatgcaa gatcgaccat
     3241 ggggcatttg ttgccggatg tagtgtacgg ctgcctcgac caggcgattc cgggccgtgt
     3301 gcccgccgag gggacgtcca atctctggag cctgaagctg atcgccggcc acggtctgac
     3361 cggcatcggt ggcaaggcgg gcacgcagtt catgacaatg agtttccatt ccggcggggc
     3421 tggcgcgcgg cctcatcagg acggtttatc ggccacgccg tttccatccg gcgtgcggaa
     3481 cgttccggtt gaggcaaccg aagccatcac gcctttggta atctggcgta aggaattgct
     3541 tccggattct ggcggcgccg gccggcagcg cggtggactg ggccaggtga tggaggttgg
     3601 gtctcgcgag gacgcggcct tcggattgtt cgcatcgttt gaaagggtga aatatccggc
     3661 acgcgggcgt aacggtggcg ggccgggggc gaagggctcg gt
//
LOCUS       DATAVD010000784         6052 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2121012, whole genome shotgun sequence.
ACCESSION   DATAVD010000784 DATAVD010000000
VERSION     DATAVD010000784.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6052
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2121012"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1695
                     /locus_tag="VHX39_14995"
     CDS             <1..1695
                     /locus_tag="VHX39_14995"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX3992474.1"
                     /translation="SVRITYGEKDYKSAGREPTDFVNSKLILMWGWSPGDGTFGTGTM
                     QYLKHAKKNGTRIICIDPRVTMTSRQLADEHVFIRPSTDAAALIAMAYVIVSEGLHDQ
                     AYCDRYVHGFDEGEVPEGASYRSYLLGLSDGQPKTPEWAAVITGIPAETIRRLAVEFA
                     STKPAALQAGYAAGRTMFGEQFHRAAYALAAITGNVGVSGGSSGVSNGATGKAGVKSL
                     PIGKNPIESRVASPLLADLLARGTAGGYPADIRMIYSSGGDLFNQCPNAGKMAASLDK
                     VKFIVAQDHFLTPTARLADIVLPATTFWERNDVHTPWAGAGHYAIYMRQAIEPMYECR
                     NDIDIFDELSRRVGINGYNDKSEAQWLRELTSDAVDDFDAFAKQGVARFPVPKDAVAF
                     AGQIRGDRTFATPTGKIEVYSTVLAADPNPYGLGVIPPIPTWFAPNDDTQRFPLSLCT
                     PKSRARTHSIHGNQPGLARVDPDTVWMHPDDAAARGIVDKQLVRVFNDIGATVLPAQV
                     TDRIAPGVVSIKEGAWYAPRKDGVDSQGCANVLTTDRAAPCGATTYNTNQVEIEAA"
     gene            complement(1875..2045)
                     /locus_tag="VHX39_15000"
     CDS             complement(1875..2045)
                     /locus_tag="VHX39_15000"
                     /inference="COORDINATES: protein motif:HMM:TIGR04256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEX3992475.1"
                     /translation="MHQNALAQEMRNPSLGVARQRRIARRYATETVDKYAVDSIVDEQ
                     VIIELKATGKPL"
     gene            complement(2555..3772)
                     /locus_tag="VHX39_15005"
     CDS             complement(2555..3772)
                     /locus_tag="VHX39_15005"
                     /inference="COORDINATES: protein motif:HMM:NF024241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992476.1"
                     /translation="MTEEEGTNYWQRNLWVCVFGSLTTIIAMTLLLPFLPLYVEQLGV
                     TDHAAIVQWSGVAYGATFLTAALTAPLWGRLGDQYGRKLMLIRASLGMAVAMSLIGLS
                     QNVYELVGLRLLTGLLGGYSSGSMILVATQTPRSQTAWALGMMSSGIMAGNLIGPLIG
                     GVLPPLIGIRMTFLAAGAIIFIAFLATTFLIKESPRPRRSRTSKQQEGFASVPNKGPV
                     IAMLATGMLLMFANMSIEPIITVYVAQIVRDPAHVTIVAGFVMAAAALGSIISASRLG
                     KLADQVGHWTVIIGCLVVCAGLLIPQAFVTAGWQLIGLRFLMGLSLGGLLPCVATVIR
                     HNVPERTAGSILGYSTSSQYVGQVAGPLAGGFVGGHFGMRAVFLGTSVLMAAGAVYGM
                     ISRPRAEHPRIFK"
     gene            complement(3769..4983)
                     /locus_tag="VHX39_15010"
     CDS             complement(3769..4983)
                     /locus_tag="VHX39_15010"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3992477.1"
                     /translation="MRVGIKIDADGQGEISPRGFVAHCDTLHRQDPTPVPEGALPAKP
                     PRRMLRVRSQRCRMRFSNFLFPAAMTAADDGRIIDETLQEAQLTDALGYDTIWLAEHH
                     FDGIVAYVDPISFAAALAVATTRARIGFAVAQMALHHPIRFAEQIALLDHLSKGRMIV
                     GLGRGTAYNIYDYQGYGIDHTEAQGRFEEAEAIMFEAWKGQPLDHHGTYFNLKLPELR
                     PGVFTKPHPYVIRASATEHGMLDIARKGNPFMMNVQNNAVTAQRIDLYRQTLREIGLN
                     DATIAAKTDECWVWRNVFVAETDAEAERIAVPAFIAMHEHRIAMRNRIYVEQQASILP
                     MPPPGAAPPAHAAIEHALVCGSPATVAEKLAPLKATGVGGLIMQFRLGPMTYEQAANS
                     LTLFNQKVAPEL"
     gene            4915..5979
                     /locus_tag="VHX39_15015"
     CDS             4915..5979
                     /locus_tag="VHX39_15015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine aldolase family protein"
                     /protein_id="HEX3992478.1"
                     /translation="MSYEPARADFSLPVRIDLYSDTHTRPSRAMKAAMLEAEMGDEQG
                     GSDPTVWELCDRTAALLGKEAAMFMPSGTMCNQVAIATHCRPGDEILAHEDAHIQSSE
                     AGGPGAISGVMIRGLAGARGIFSAETLRGAVRPVSRYSPPQRLVEVEQTANKGGGACW
                     TVDELQAVADVAHEHGMKVHMDGARVLNAAVALKVAASDVTAACDTVWVDFTKGLGAP
                     LGAVLAGSSAFIGEAWRWKQRLGGSMRQGGMNAAACIYALEHNIDRLADDHANAAALA
                     RGMAQIPGITVETPETNLVFFDTTGTGLTAAEFAARLRPLGVTVSVSETFRGRACTHL
                     DVDAGQIEEAVAIMRGVVGG"
BASE COUNT         1050 a         1570 c         2207 g         1225 t
ORIGIN      
        1 tccgtccgga tcacttatgg tgagaaggat tataagtcgg cggggcggga gccgacggat
       61 ttcgtcaatt ccaagctgat cctgatgtgg ggttggagtc cgggggatgg cacgttcggc
      121 accgggacga tgcagtatct gaagcatgcg aagaagaacg gcactcgtat catttgtatc
      181 gatccacggg tgacgatgac cagccggcaa ttggcagatg agcatgtgtt tattcgtccg
      241 tccacggacg ctgcggcgct gattgccatg gcgtacgtga tcgtgtcgga gggtctgcac
      301 gaccaggcgt attgcgatcg ttacgtgcat gggtttgatg agggggaggt gccggaaggc
      361 gcgtcttatc ggtcgtatct gctggggttg tctgatgggc agccgaaaac gccggaatgg
      421 gcggcggtga tcaccggtat tccggccgaa acgatccggc ggctggcggt ggagtttgcc
      481 tcgaccaaac cggcggcgtt gcaggccggg tatgccgcgg ggcggacgat gtttggtgag
      541 cagttccatc gggcggctta tgcgctggcg gcgattaccg ggaatgttgg ggtcagcggg
      601 ggtagttcgg gcgtcagcaa tggggcgacg ggtaaggcgg gggtgaagag tttgccgatt
      661 gggaagaacc cgatcgagtc cagggtggcc tcgccgctgc tggcggacct gctggcgcgg
      721 ggcacggcgg gtggctatcc ggcggatatt cggatgatct attcctcggg cggggatttg
      781 ttcaaccagt gcccgaatgc ggggaaaatg gcggcgtcgc tggacaaggt gaagttcatt
      841 gtcgcgcagg atcatttcct gaccccgacg gcgcgactgg ccgatatcgt gttgccggcg
      901 acgacctttt gggaacggaa cgatgtgcat acgccttggg ctggggccgg gcattacgcg
      961 atctatatga ggcaggcgat cgagccgatg tatgagtgcc gcaacgacat cgatatattc
     1021 gatgaattgt cccggcgggt tgggatcaac gggtataatg acaagtccga ggcgcagtgg
     1081 ttgcgggaac tgacctccga cgccgtggac gacttcgatg cgttcgccaa acaaggagtt
     1141 gctcggtttc cggtgccgaa ggatgccgtg gcgtttgcgg ggcagatccg cggggatcgg
     1201 acttttgcga cgccgactgg gaagatcgag gtttattcga cggttttggc ggccgaccct
     1261 aatccgtatg ggctaggggt gatcccgccg attccgacat ggttcgcacc caatgacgat
     1321 acgcaacggt tcccgttgag cttgtgtacg ccaaaatctc gagcacgtac gcatagtatc
     1381 catggtaacc aacccgggct cgctcgggtc gatcccgata cggtttggat gcatcctgat
     1441 gatgcggcgg cgcgtgggat cgtcgacaag cagcttgtgc gggtgtttaa cgatattggt
     1501 gcgacagtgt tgccggcgca ggtgacggat cggatcgcgc cgggagtggt gtcgatcaag
     1561 gaaggggctt ggtacgcgcc aaggaaggac ggggtcgatt cgcaggggtg tgccaacgtg
     1621 ttgaccacgg atcgggcagc gccatgcggg gctacgactt ataatacgaa ccaggtggag
     1681 atcgaggcgg cttagccgct cgttttctga ctcttgaggc tttccgcaaa taaccggtgg
     1741 gccgcctgcg gactgcgttc gtcgctttgc ttttttcaag gcggattagc gggatgaagg
     1801 tgatgtcttc gcgatcaggc ttggccggcg gggcggtgga tttccacttt gggcggcccg
     1861 aagttgttcg gtagtcatag cggctttccg gtcgccttga gttcgatgat gacctgttcg
     1921 tccacgattg agtcgacggc gtacttgtcg accgtctcgg tggcgtaacg ccgtgcgatt
     1981 cgccgctgcc gggcgacgcc gaggctgggg tttcgcattt cttgggcgag ggcgttctgg
     2041 tggatttttc taccagctca tgaccgaccg cattggcagg attgaaggga cagccgatga
     2101 tccgtttggg caccggccgt aacgaccacg cgtcccttca tccatctgca tcccactcat
     2161 ccgccttcaa aagtctgctt tggttgtccg tgaggatatc tgacgggacg ggaatgttcc
     2221 gttccacaag tgttagcgaa ggataaatcc ggcaggccgt attggcctgg gccttatacc
     2281 aatcgccctt gatgttgacc catcggcagc accgagcagc cgtcatggcg agcgcaggct
     2341 cgccaaccat gcctttgttt ccgctcgtaa aaggcgtgga taccggcatg cgccggcatg
     2401 acggacgggg tcaaccgaag agtttgcatc aatgccggtt ggtattactc gttcctttgc
     2461 tttggcgcag gctcagaatc catgcgcgtc ttgggtgtgg atggcgggcc tgagtccgct
     2521 atggcgggat tgggcgaaaa tgccgttgtc gggatcactt gaatatccgc ggatgttcag
     2581 ccctcggccg ggagatcatt ccatagacgg cgccggcggc catcaggacc gaggttccca
     2641 ggaagaccgc gcgcatgccg aaatgaccac cgacgaagcc gcccgccagg gggccggcga
     2701 cctggccgac atactgcgat gaggtcgagt aaccgaggat gctgccggcg gtgcgttcgg
     2761 gaacgttgtg ccgtatgacg gttgcgacgc agggcagcag gccgcccagc gacaggccca
     2821 tcaggaagcg tagcccgatc aactgccagc ctgccgtaac gaatgcctgg gggatcagca
     2881 ggccggcgca gaccaccagg cagccgatga tgacggtcca gtggccgacc tggtcggcca
     2941 gtttaccgag gcgggatgcg gagatgatgc tgccaagcgc ggcggcggcc atcacgaagc
     3001 cggcgacgat ggtgacatgt gccggatcac gaacgatctg cgccacgtag acggtgatga
     3061 tcggctcgat cgacatgttg gcgaacatca gcagcatgcc ggttgccagc atggcgatta
     3121 ccggaccctt gttgggaacc gaggcaaagc cttcctgctg cttcgaggtg cgggaccggc
     3181 gcgggcgcgg tgattccttg atcaggaagg tggttgccag gaaggcgatg aagatgatcg
     3241 cgccggccgc caggaatgtc atgcgaatgc cgatcagcgg cggcagaacg ccgccgatca
     3301 gcgggccgat cagatttccg gccattatgc cggatgacat catgcccagc gcccaggcgg
     3361 tctgcgatct tggtgtctgc gtcgccacca ggatcatcga gcctgacgag tagccgccca
     3421 gcagccctgt gagcaggcgg agtccgacaa gttcatagac gttctgcgac aggccgatca
     3481 gtgacatggc cacggccatg cccaggctgg cccggatcag catcagtttg cggccgtatt
     3541 gatcgcccag ccggccccac agcggggcgg tcagcgcggc ggtgaggaag gtcgcaccgt
     3601 aggccacgcc ggaccattgc acgatcgcgg cgtgatcggt gacgccaagc tgttccacgt
     3661 acagcggcag aaacggcagc agcaatgtca tcgcgatgat cgtggtgagc gatccgaaga
     3721 cgcagaccca caggttgcgc tgccaatagt tagtcccctc ttcctcggtc acagctcggg
     3781 ggccactttc tggttgaaca gggtcaggct gtttgccgct tgctcgtagg tcatcggacc
     3841 gaggcggaat tgcatgatga ggccgccgac gccggtggct ttcagggggg cgagtttctc
     3901 tgccaccgtg gcgggggagc cgcaaaccag cgcgtgctcg atcgcggcgt gggcgggggg
     3961 cgcggcgccg ggcggtggca tcggcaggat ggaggcttgc tgttccacat agatacggtt
     4021 gcgcatcgct atgcggtgtt cgtgcattgc gatgaaagcg ggaacggcga tgcgttcggc
     4081 ctccgcatcg gtttcggcga cgaagacgtt gcgccagacc cagcactcgt cggtttttgc
     4141 cgcgatggtt gcgtcgttca ggccgatttc gcgcagggtt tgcctgtaca gatcgatgcg
     4201 ctgggcggtc acggcgttgt tctggacgtt catcatgaac gggttgccct tgcgggcgat
     4261 gtccagcatg ccgtgttcgg tggcggaggc tcgtatcacg taggggtgcg gcttggtgaa
     4321 cacgcctggg cgcagttcgg gcagtttcag attgaagtag gtgccgtggt gatcgagggg
     4381 ctggcctttc caggcctcga acatgatggc ttcggcttcc tcgaagcggc cttgcgcctc
     4441 ggtgtggtcg atgccgtagc cttggtagtc gtagatgttg taggcggtgc cgcggccgag
     4501 gccgacgatc atccggccct tgctgaggtg gtcgagcaag gcgatctgtt cggcgaagcg
     4561 gatggggtgg tgcagcgcca tctgcgcaac ggcgaaaccg atgcgggctc gggtggtggc
     4621 gacggcaagg gcggcggcga agctgatcgg atcgacatag gcgacgatgc cgtcgaaatg
     4681 atgctccgcc agccagatcg tgtcgtatcc gagcgcatcg gtgagttggg cttcctggag
     4741 ggtctcgtcg atgatgcgtc cgtcatcggc ggccgtcatg gcggcgggaa acaggaagtt
     4801 ggagaatctc atccggcacc tttgtgaacg aacccgcagc atccgacgtg gcggctttgc
     4861 aggcaatgcc ccttctggta ctggcgtggg gtcctgtcga tggagtgtat cgcaatgagc
     4921 tacgaacccg cgcgggctga tttctccctg cccgtccgca tcgatcttta ttccgacacg
     4981 catactcggc cgtcgcgcgc gatgaaggcg gcgatgctgg aggccgagat gggggatgag
     5041 caaggtggct ccgaccccac ggtatgggag ctatgcgatc ggacggcggc tctgctgggc
     5101 aaggaggcgg cgatgttcat gccgtccggc acgatgtgca accaggtggc gatcgccacg
     5161 cattgccggc cgggtgatga gattctggcg catgaggatg cgcatatcca gtcgagcgag
     5221 gccggcggtc cgggggcgat cagcggggtg atgatccgcg ggttggcggg ggctcggggg
     5281 attttcagtg ccgagacgtt gcggggcgcg gtgcggccgg tgtcgcgtta ctcgccgccg
     5341 cagcggttgg tggaggtgga gcagaccgcg aacaagggcg gcggggcttg ttggacggtg
     5401 gatgagctgc aggcggtggc ggatgtggcg catgagcatg ggatgaaggt gcatatggat
     5461 ggcgcgcggg tgctgaatgc ggcggtggcg ctgaaggtgg cggcgagtga cgtgacggcg
     5521 gcttgcgaca cggtttgggt ggattttacg aaggggttgg gggctccgtt gggggcggtt
     5581 ttggctgggt ctagcgcgtt tattggggag gcttggcggt ggaagcagcg gctgggtggg
     5641 tcgatgcggc agggggggat gaatgctgct gcctgcattt acgcgctgga gcacaatatc
     5701 gaccggctgg cggacgatca cgcgaatgcg gcggctttgg ctcggggcat ggcgcagata
     5761 ccggggatta ctgtggaaac gccggaaacg aacctggtgt tcttcgatac gacggggacg
     5821 gggctgacgg cggcggagtt cgcggctcgg ttgcggccgc tgggggtgac ggtgtcggtg
     5881 tcggagacgt tccgggggcg ggcttgcacg catctggacg tggatgcggg gcagatcgag
     5941 gaggcggtgg cgatcatgcg tggggttgtt ggagggtagg tggctggcgc cgcgattcct
     6001 tgacattaac ctctcctgta tctacctttc cgtagataca ggagagagag tt
//
LOCUS       DATAVD010000785         3621 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3612494, whole genome shotgun sequence.
ACCESSION   DATAVD010000785 DATAVD010000000
VERSION     DATAVD010000785.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3621
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3612494"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..385)
                     /locus_tag="VHX39_15020"
     CDS             complement(<1..385)
                     /locus_tag="VHX39_15020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992479.1"
                     /translation="MPNWINVENLRITTKVGLIVALLAAVSLGATGYSALRMKSVDSA
                     YSDLITRVEGATIQSARANRVVVTYLSRAYQLVVETTHEGNVKLLAEAEASEANYGKM
                     MDRVRTGVPEQASAIDAGVSSVRQAF"
     gene            754..1572
                     /locus_tag="VHX39_15025"
     CDS             754..1572
                     /locus_tag="VHX39_15025"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3992480.1"
                     /translation="MDLGLHGKHAIVTGGSRGIGKAIARELAREGVDVAIVARNKDAL
                     EATARELAAETNRRILPLAADVTSRDQVDRMVAEAAQVLGGLNILVNSGSSPGGSTTA
                     TGPIDTVVDEDLIQDFNVKYVGALRCSRAVIPFMKTAGWGRIINISGANARNAGNLSG
                     GVRNAGLVHMTKTLAVQLGRHGITVNCIHPGTTRTERTPSLLAARGTALGVSPEEAER
                     QDFAPDSPRGNAICRMVDASEVAFVTVFLASDKAWAVSGELVAATGGAGRTVHY"
     gene            complement(1679..>3621)
                     /locus_tag="VHX39_15030"
     CDS             complement(1679..>3621)
                     /locus_tag="VHX39_15030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3992481.1"
                     /translation="VENVERNISAGLSPVEAAHRTMDEVGGALISIALTLCAVFVPSA
                     FLSGITGQFFRQFAVTIAASTVISCFVSLTLSPALCSLLLKPHSAQHAPASLPARMVA
                     AGFGGFNRGFEFLSLGYGRLTRRLVRGLAVVVAVYIALIASAGFEFSRAPTGFIPEQD
                     QGYLITVVQLPPGASLARTEQVVKQAVDIILKTPGVEHVAPFAGLDATTFTVGSNSGT
                     IFSGLPSLYNHQVPGITANSVLADLRRRLSVIEGAYILTIPPPPVQGIGNSGGFKMML
                     EDRTGLGSQALVDAANALVAAANRDPDFAGVFTLLNTGSPSIYADIDRVKAEKVGLTP
                     SDVFATLQLYLGSQYVNDFNFLGRTYEVIAQADGRFRRDAQDLTRLQARNTAGEMVPI
                     GTVADLKRTTIPYRVPRYNLFPAAEVQGVAAPGVATGTALHRMEELAAQVLPPGIGFE
                     WTEIAFQQEQKGTPTAFIFGAAALFVFLVLAAKYESWRTPFAVVLIVPMCLLASVSGL
                     MVRDMPIDILAQIGFVVLVGLAAKNAILIVEFARQHQDEGSTAAEAAIYAARTRLRPI
                     LMTSLAFILGVTPLVVATGAGAEMRQSLGPAVFAGMLGVTAFGLIFTPAFYTIMQRTG
                     LVRRQAQGLQHDGSGTAIPRAG"
BASE COUNT          743 a         1190 c         1099 g          589 t
ORIGIN      
        1 caaacgcctg gcgaacgctg gaaacccctg cgtcgatagc gcttgcctgt tccggcacac
       61 cggttcgcac ccggtccatc atttttccgt agttggcttc actcgcctcc gcttctgcca
      121 gcagcttgac gttaccttcg tgcgttgttt ccaccaccaa ctgataggcg cgcgacagat
      181 aggtcacgac gactcggttc gctcgggcag actgtatcgt ggcgccttcg acgcgcgtga
      241 tcagatcgga ataggcgctg tcgacagact tcatacgtag cgccgagtac cccgtcgcgc
      301 ccagtgagac ggccgccaga agggccacaa tcaggccgac cttcgtggtg attcggaggt
      361 tttcgacgtt gatccaattc ggcatgacgt gcgcgttcct ttagtggcgg cgtatggcgg
      421 cacaatgcgc gaataatatt aacaaaggat aagtgacgca tttcactccg gcgataaatg
      481 cgatgacaat ggcatggggc ttttgcaatt gacgcagcac gtcccgcctt gcgtgtcagc
      541 gcgcccaacc agattgcgcc gtggccatgc cgcccgcgcg gattgacgag gccggcaaga
      601 gctcgccgag gcagcgcaac agtcaacgcc atgcgcgcac atccgatgcc atcccgctta
      661 agtcaggcaa cccttgcgcg gctccgcctg cgagagaaca atgacccccg aaccaacaaa
      721 atcgcggtca cgccgccaac gggagagaac accatggacc tcggactgca cggcaagcat
      781 gccatcgtga ccggcggcag ccgaggcatc ggcaaagcca tcgcgcgtga actggcgcgc
      841 gagggcgttg atgtcgcaat cgtggcccgg aacaaagacg ccctggaagc cacggcgcgg
      901 gaactggcgg ccgagaccaa ccggcgcatc cttcccctcg ccgccgatgt gaccagcagg
      961 gaccaggtcg accgcatggt cgccgaggca gcccaggtat tgggcgggct gaatattctg
     1021 gtgaacagcg gttcctcgcc aggcggttcg acgacggcaa ccgggccgat cgacaccgtc
     1081 gtcgatgagg acctgatcca ggacttcaac gtgaaatatg tcggcgcgtt gcgttgctcc
     1141 cgcgcggtca tcccgttcat gaagaccgca ggctggggcc gtatcatcaa catcagcggt
     1201 gccaacgcgc gcaacgccgg caacctcagt ggcggcgtcc gaaacgctgg ccttgtgcac
     1261 atgaccaaaa cgctggcggt gcaattgggg cgtcacggaa tcacggtcaa ttgcatccat
     1321 cccggcacca cccgcaccga gcgcacgccg agcctgcttg ccgctcgcgg gaccgcactg
     1381 ggcgtatccc cggaggaagc cgaacgccag gacttcgctc cggactcgcc acgcggcaat
     1441 gccatctgcc gcatggtgga cgcctctgag gtcgcgttcg tcacggtgtt cctggcttcc
     1501 gataaggcct gggccgtctc tggcgagctg gtcgcagcca ccgggggagc cgggcggacg
     1561 gtgcattact aagcgcgccg tctgctgtcc cgtgagaatt ctgctgacat cgcgcgcgat
     1621 gagcaaagct gaaccataaa gccgcaacat gggacgccag cgccggccga ttgtctgctc
     1681 agccggcgcg cggaattgcc gtcccggaac cgtcatgttg caaaccctga gcctgccgcc
     1741 gcaccagacc tgtgcgctgc atgatcgtgt agaacgccgg cgtgaagatc aaaccgaacg
     1801 ccgtcacacc caacataccc gcgaacaccg ctgggccgag cgactgccgc atctccgctc
     1861 ctgctcccgt tgcgacgacc agcggtgtga cgcccagaat gaacgcaagc gaggtcatca
     1921 ggatcgggcg gagccgggtg cgcgccgcgt agatcgccgc ctccgcggcc gtgctcccct
     1981 catcctggtg ctggcgcgcg aattccacaa tcagaatggc attctttgca gccagaccga
     2041 ccagtaccac gaagccgatc tgcgccagaa tgtcgatcgg catgtcgcgg accatcaggc
     2101 cgctgaccga cgcaagtaga cacatcggca cgatcagcac gaccgcaaat ggcgtccgcc
     2161 aactctcata ttttgccgcg agcacgagga acacgaacaa tgctgcagca ccgaagataa
     2221 aagcggtcgg tgtgcccttc tgttcctgct ggaacgcgat ctcggtccat tcgaaaccga
     2281 tgccgggcgg caatacctgt gccgcgagtt cctccatccg gtgcaacgcc gtgccggtgg
     2341 caacgccggg cgctgcgaca ccctgcactt cggccgcggg aaacaggtta tagcgcggca
     2401 cacggtatgg gatcgtcgtc cgtttcaggt cagcaacagt accgatcggc accatctcgc
     2461 ccgccgtgtt gcgtgcctgc agccgcgtga ggtcctgagc gtcacgccgg aagcggccgt
     2521 ccgcctgcgc gatcacctca tacgtacggc caagaaaatt gaagtcgttg acgtattgcg
     2581 aaccgagata gagctgcagc gtggcaaaca catcgctcgg cgtcaggccg accttctcgg
     2641 ccttaactcg gtcgatatcc gcatagatcg atggcgatcc cgtgttgagc agcgtgaaca
     2701 cgccggcaaa atccggatcc cggttcgccg cagcaacaag cgcattagcc gcgtcgacca
     2761 gcgcctgcga gcccagaccc gtgcggtcct ccagcatcat cttgaaaccg ccggagttgc
     2821 cgataccctg caccggaggc ggcggaatgg tcagaatgta agcgccctcg atcaccgaca
     2881 gtcgccggcg cagatccgcg agcaccgagt tcgccgttat gcccggaacc tggtggttat
     2941 acagcgaggg caggcccgag aaaatcgtgc cggagttcga gccaaccgtg aacgtcgtcg
     3001 catccagtcc ggcgaacggc gcgacatgct cgacgcccgg cgttttgagg ataatgtcga
     3061 cggcctgctt caccacctgc tcggtgcgcg caaggctggc gcccggcggc agttgcacga
     3121 cggtgatgag atagccttga tcctgctccg gaatgaaccc ggtcggggcg cgcgagaact
     3181 cgaacccggc cgaggcgatc agcgcgatat agaccgcaac cacgaccgcc aacccccgga
     3241 cgaggcggcg ggtcaggcgt ccatagccaa gcgacaaaaa ctcaaagccg cggttgaacc
     3301 cgccgaatcc tgccgccacc atacgagccg gcaggctggc cggcgcatgt tgcgccgaat
     3361 gaggtttcag cagcaacgag cacaaggccg gactgagcgt cagcgaaacg aagcaggaaa
     3421 tcaccgtcga ggctgcgatg gtcactgcga actgacggaa gaactgcccg gttatgccgg
     3481 acagaaacgc cgagggcacg aacacggcgc acagcgtcag ggcgatcgag atcagcgcgc
     3541 cgccaacctc gtccatcgtc cgatgcgctg cctcaacggg cgacagtccc gcactgatgt
     3601 ttcgctcgac gttctcgacc a
//
LOCUS       DATAVD010000786        10068 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3237221, whole genome shotgun sequence.
ACCESSION   DATAVD010000786 DATAVD010000000
VERSION     DATAVD010000786.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10068
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3237221"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VHX39_15035"
     CDS             <1..298
                     /locus_tag="VHX39_15035"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX3992482.1"
                     /translation="MAPIDALSLTGASRLQVFTHGVVPSVLPALAGIGLYRLDENIRS
                     SLVLGFVGAGGIGFQLLTAMNLFQYRQVSLLLIVVFVIVLVAERLSAVCRERLA"
     gene            355..1101
                     /locus_tag="VHX39_15040"
     CDS             355..1101
                     /locus_tag="VHX39_15040"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3992483.1"
                     /translation="MARFIGLLPVASIAAGLGLWELIGRLSPPVLFAPTSAAFLFLVH
                     QTETGVLPAAIAHSLLTLVTGYALAAVAALPLGFAMGRVAWVHELLHPVLTGIYAIPP
                     AAFIPFLIVWFGLFTQSRIAIVVIMCFFEMLVITATGARAIDRRLLDVARSFTAPRRR
                     VIRAVLIPASLPFLFTALRIGLVRAVAGMITAELLLSPANLGKLLLASAGRFDTAGML
                     AVIATVAMIGLAAQQVLRWLERHVLRWERP"
     gene            1146..1907
                     /locus_tag="VHX39_15045"
     CDS             1146..1907
                     /locus_tag="VHX39_15045"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX3992484.1"
                     /translation="MSNATRLSLRLTGLALFLIIWELAGRYLGDALMAPPSAVARELI
                     ALAEDAEARATIWQSIAPALVGFAIACAVGMPVGVVMGRSPVWNALLHPWVSIFVVTS
                     VAAIVPILILLIGTGWWFVVAVVVLSSVWYITLTTYQGAVRIDRRWLDVGRSFGASRI
                     RSFRTIMLPALFPYLLAGSRIGLTHAIRSMVLAQLFIVSGIGGMLNEAGMDVSTARLL
                     ALLVVIMAIGLIASHGLGRLADWLAPWQKGLEPQR"
     gene            1982..2839
                     /locus_tag="VHX39_15050"
     CDS             1982..2839
                     /locus_tag="VHX39_15050"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3992485.1"
                     /translation="MKTRHLNPTIGVEITGVDLSAPLDDTTFGSIREAWLHNKVAVFP
                     DQKLTEEGLMRFGKRFGELEIHVRSTYHSRHNSEVMIVSNKKEEGRSIGVLGDGEAVW
                     HIDQSYMPQPTFGTILFGEEIPPEGGDTWFADLATAYERLPQDLKAKIAGKCGVNSVD
                     RHNRRDAATRPDLQMSAEQLKRAPDSPHPLVRTHPLLGTQAIYYSPSHTAEVQDLSEA
                     DSLALFAELLPHMTQPDLIYKHHWSVGDVVMWDNSATMHRRDPFPGQYSRLLKRVSFK
                     YPPEHRIPV"
     gene            2850..3878
                     /locus_tag="VHX39_15055"
     CDS             2850..3878
                     /locus_tag="VHX39_15055"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3992486.1"
                     /translation="MLTRRNALTTASLAAFITPFGTQVSFGSTKRVLKVMSNANVAGI
                     HVPGNVACREILQQIGDYAPIDLTRMEKQANITQVLVGGGPDIVDADTPSVAAAVNAG
                     ADLKIVGQFYASVDLVFTADADKVTKLEDLTKPGVVCGINTPGDTVHAVLLGVLMKHG
                     IDISKVNIVALGGSSARMRALLAHRVHLVPIHADQAGSIAKQGNYQVLIKPWKEYDFW
                     SNEVWAVNGKWLQDPLNQKVVVDVMEAQLRANRSATTDFPWFAGMFRKYSNDRDAAHW
                     PDERIHDEWTLLAQEIKAWPEPMPLDLASFNKMIPIYQKAGIVSAGASFDKIIEPRYL
                     AEAQSRIG"
     gene            3875..4678
                     /locus_tag="VHX39_15060"
     CDS             3875..4678
                     /locus_tag="VHX39_15060"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3992487.1"
                     /translation="MTRVLEQRPSVQPTTAAPKLRTTGLTRRFAQGGLTVFEDLTLDV
                     ENLQFVAIIGPSGCGKSTFLRILNGLDQADSGTIEIDGRRVTGPGAGRAMVFQGFDLF
                     PWRTALENVAFGLEMQGHSKRERLAAARQYIDLVGLTGFAQSYPHQLSGGMQQRVGIA
                     RALAVRPDILLMDEPFGALDLQTRDLLQDELLRIWQNDRKTVLFVTHSIEEAIYLADR
                     ILVFSPRPACIERDILVPFARPRDEEMKTSADFLAIRREIWGLLKHGTS"
     gene            complement(4675..6273)
                     /locus_tag="VHX39_15065"
     CDS             complement(4675..6273)
                     /locus_tag="VHX39_15065"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3992488.1"
                     /translation="MQADFVIVGAGSAGCVLANRLTENPNTRVILIEAGGRDWHPLLH
                     IPAGYMKMLDHPRVTWGYKADSESGLNGRVIAYPRGKVLGGSSSINGMIYIRGQPEDF
                     DHWAQLGNRGWSWDDVLPFFKKAENWEGQADDVHSKGGPLFTSPTRDQPELCLAAVEA
                     GKQMGWEYRRDVNDLPPGLGDHIGWIQQTRGGRFRASAARSYLNPAKKRPNLQVVTNA
                     LVQRVLFDGARAVGVAFSRDGKMERADATAEVILSAGAIGSPHILQLSGVGDPEHLGR
                     VGISVQHALPGVGRNFQDHFLARVSAEVKDVATLNEKSRGLGLVGEVMRYVLTGRGLL
                     TYGASLVAASVKVLPESATPDVQALFASASYAPGPKRRLADEPGMTSGVWQMRPLSRG
                     HVEARSPRPEDQPSINPRYLDDERDRRAIVGGLRRVRQWFQAPALARYLVAETLPGPD
                     VQTDDEFVAFARQTGTTVFHASCSCRMGPDPMSVVDDQLRVHGLQGLRVIDASVMPAV
                     TSTNTNAPTIMIAEKGAAMVRASA"
     gene            6351..6881
                     /locus_tag="VHX39_15070"
     CDS             6351..6881
                     /locus_tag="VHX39_15070"
                     /inference="COORDINATES: protein motif:HMM:NF014494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavoprotein"
                     /protein_id="HEX3992489.1"
                     /translation="MAQEETFDVAYLVLSGTTTAARCPELLRGLIGLGFPTVIAIPTP
                     NASRVIAPRELADVAGARVVESYFDAAIRPRPPRGVVLFAPCGFNSLNKLAHGTADTL
                     ALSVVAEAIGRGTPVIVGPSLNQPLLDHPVARTSLVTLAGWGVTIVPMADERDGPRLA
                     PTPQLLNAVRPYVQQR"
     gene            6944..7738
                     /locus_tag="VHX39_15075"
     CDS             6944..7738
                     /locus_tag="VHX39_15075"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX3992490.1"
                     /translation="MNLTSGLVGAEKTGGIGWLIWDNPSKLNALSPGMSEDALTVIAA
                     YEADPAIKVVIMRGAGRKAFISGGDIKSFDKTRADPETARLAREAPGKLRLKMLNLEK
                     PLIAMIYGYCLGGGLGMALNADLRFASSDAQFSVPAALRGIAYAPEGLKSLVDLVGPS
                     IAKDIMFSGRRLKTEEALRIGLINRVVDAETLEAETIAYAETLAANAPLSIRASKYFI
                     NQLGLERAQRNEARMDAMQREAEASEDFKEATLSFLEKRKPVFQGR"
     gene            complement(8036..9217)
                     /locus_tag="VHX39_15080"
     CDS             complement(8036..9217)
                     /locus_tag="VHX39_15080"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3992491.1"
                     /translation="MADLPLKGLFVLDLTAHRAGPTAVRQLADWGADVIKIEPPGEAK
                     GDVVGGNRHGFDFQNLHRNKRGMTLNLKTPEAHAIFMKLASRADVVVENYRSDVKYRL
                     KVDYDTIAAVNPRIVYGSISGFGQSGPDATRPGVDQIAQGMGGLMSITGLPGQGPVRV
                     GIPIADLTAGIFLSQAILLALMQRAQTGKGQWVHTSLLEAQIFMLDFQASRWLMAHEV
                     PGQAGNDHPTGIPTGVFPTADGHINIAASGQGLWERFCKAIGWQQALSDPDYANGGLR
                     SKNRKVLNERIGAITRTKPSAHWLEVINKAGVPCGPINDIAGVFAEPQTQHLGIARAV
                     HHPKLGDIRVVGQPINLSDNPQPEILGATPDLGQHTDAILGELGYDAAAIADFRVRGI
                     V"
     gene            complement(9222..>10068)
                     /locus_tag="VHX39_15085"
     CDS             complement(9222..>10068)
                     /locus_tag="VHX39_15085"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3992492.1"
                     /translation="DRSLAEGERYFGFEVADAAALKSLAARLDAAGVKVRQEPKSLAD
                     QRFVKDLISFDDPGGNHLEAFHGAAIASEPFRPGRSISGFRTGALGMGHVVFHVKNID
                     DLLGFYKDLLGFGVSDYISTPFRAYFLHTNARHHSVALIETGKQDLHHLMVELFSLDD
                     VGQGYDIALGEPERIATTLGRHPNDAVTSYYLRSPGGFMLEYGWGGKEVTPGNWTPTE
                     VTVGPSLWGHDRAWLPADQRQKARDMRLKAAADGTREPLHVIDGNYQRMDGVCPWWDA
                     ATGRA"
BASE COUNT         1834 a         3320 c         3058 g         1856 t
ORIGIN      
        1 catggcaccg atcgatgcgc tttcgctgac cggtgccagc cggctgcagg ttttcaccca
       61 tggcgtggtg ccgtcggtac ttcctgccct ggccggaatc ggcctgtatc gccttgacga
      121 gaatatccgc tcgtcgctgg tcctgggatt tgtcggcgcc ggcgggatcg gattccaact
      181 gctgaccgcg atgaacctgt tccagtatcg acaggtttcg ctacttctga tcgtagtctt
      241 cgtcatcgtg ctggtcgccg aacgtctgtc ggctgtatgc cgggaacggt tggcttaggc
      301 acgttgcccg ccggccggat tgtctgccgg cccggttcgt cgcagtctgg cgggatggct
      361 cgtttcatag gcttgctgcc ggtcgcgtcc atcgccgccg ggctgggact ttgggagttg
      421 attggccggt tgagcccgcc ggtgctgttc gcgccaacat cggccgcgtt cctgttcctg
      481 gtgcatcaga cggaaaccgg cgtgctgccg gcggcgatcg cgcattcact gctgacactg
      541 gtcaccggct acgccctggc tgctgtcgct gcgctgccgc tgggttttgc catggggcgc
      601 gtggcctggg tgcacgaact gctgcatccg gtgctgacgg ggatctatgc catcccgccg
      661 gccgcattca ttccgttcct gatcgtctgg ttcggcctgt tcacccaatc tcgcatcgcc
      721 atcgtggtga tcatgtgttt cttcgaaatg cttgtgatca ccgccaccgg cgcccgcgcg
      781 atcgaccgcc gcctgctgga tgtggcgcgc agcttcacgg cgccgcggcg tcgggtcatc
      841 cgcgcagtgc tgatcccggc cagcctgccg ttcctgttca ccgccctgcg catcggcctg
      901 gtgcgcgcgg tcgccggcat gatcacggcc gagttgctgt tgtcaccggc gaatttgggc
      961 aagttgctgc tggccagcgc cggaaggttc gacaccgccg ggatgctggc ggtgatcgcc
     1021 acggtcgcca tgatcggctt ggcggcgcaa caggtactgc gctggctgga acgccacgtg
     1081 ctacgctggg aacggccgtg agcagagcta cgggaacggg catgagcgga ccgtcgagaa
     1141 cgggcatgag caacgccaca cgcctgtcct tgcgtctgac cggactggcg ctgtttctaa
     1201 tcatttggga actggccggc cggtacctgg gcgacgcctt gatggcgcca ccgtcagcag
     1261 tggcccgcga actcatcgca ttggccgagg atgcagaggc gcgcgcgacc atctggcagt
     1321 ccatcgcacc ggccctggtg gggttcgcaa tcgcctgcgc ggtgggcatg ccggtaggtg
     1381 ttgtgatggg ccggtcgccg gtctggaacg ccttgctgca tccttgggta agcattttcg
     1441 tggtgacctc ggtcgctgcg atcgtgccga tcctgatcct gctgatcggc accggatggt
     1501 ggttcgtggt cgcggtcgtg gtgctgtcat cggtgtggta catcaccctt acaacttatc
     1561 agggcgctgt ccgcatcgac cgccgctggc tggatgttgg acgttccttc ggtgcgtctc
     1621 gcatccggtc attccggacc atcatgctgc ccgcactatt cccctatctg ctggccggtt
     1681 cccgcatcgg cctgacccac gcaatccgct caatggtcct ggcgcagttg ttcatcgtca
     1741 gcggcattgg cgggatgctg aatgaggccg gcatggacgt ctcgaccgct cgtttgctgg
     1801 cgctcctggt tgtgatcatg gcgattggac tgatcgccag ccacggtctg gggcggctcg
     1861 ccgactggct ggcgccctgg cagaaggggt tggaaccgca gcggtaacac ccgtcgctct
     1921 ggcatcttcg ggcgacccat gctctgcttc ggtcaacatt cccgcagagg aggaacgacc
     1981 catgaagacc cgtcacctca accccaccat tggcgttgaa atcaccggtg tcgacctgtc
     2041 cgcaccactg gacgacacga cattcggctc gatccgtgag gcctggctgc acaacaaggt
     2101 cgcggtcttt cccgaccaaa agctgaccga ggaagggctg atgcgcttcg gcaagcggtt
     2161 cggcgagttg gagatccatg tccgctccac gtaccactcg cggcacaatt ccgaggtgat
     2221 gattgtctcc aacaagaagg aggaaggacg gtcgatcggt gtgctgggcg atggtgaggc
     2281 ggtgtggcac atcgaccagt cttacatgcc gcagccaacc ttcgggacga tcctgttcgg
     2341 cgaggaaatt ccgccggagg gcggcgacac atggttcgcc gatctggcaa cggcctacga
     2401 acggctgccg caggacctga aggcgaagat cgcgggcaaa tgcggcgtga actcggtgga
     2461 tcggcacaac cggcgtgacg cggcgacgcg gccggacttg cagatgtcgg ccgaacagtt
     2521 gaagcgcgca ccggattcgc cgcatccact ggtgcggact cacccactgc tgggaaccca
     2581 ggcgatctac tacagcccca gccacacggc ggaggtgcaa gatttgtcgg aagctgacag
     2641 tctggcgctg ttcgcggaac tgctgccgca catgacgcag cccgatctga tctacaagca
     2701 tcactggtcg gtgggcgatg tggtgatgtg ggacaacagc gccacgatgc accggcggga
     2761 tccgttcccc ggccagtatt cgcggctgct gaagcgggtc agcttcaagt atccgcccga
     2821 gcatcggatc cccgtctgag gatatggcga tgttgactcg acggaatgcg ctgacaaccg
     2881 cgagcctggc ggcattcatc acacccttcg gcacgcaggt ttccttcggc agcactaaac
     2941 gggtgctgaa ggtgatgtcg aacgccaacg tggccggtat ccacgtgccg gggaacgtag
     3001 cgtgtcggga gatcctgcag cagatcggtg attatgcgcc aatcgacctg acccggatgg
     3061 agaagcaggc gaacatcaca caggttctgg tgggcggcgg tccggacatc gtggacgccg
     3121 atacgccatc ggtggccgcc gcggtgaatg cgggcgcgga cctgaaaatc gtcggccagt
     3181 tctatgccag cgtcgatctg gtattcaccg ccgatgccga caaagtgacg aaactggagg
     3241 acctgaccaa gcccggcgtg gtctgcggca tcaatacacc tggcgataca gtgcacgcgg
     3301 tgctgctggg cgtgctgatg aagcacggta tcgacatcag caaggtcaat atcgtcgcgt
     3361 tgggcgggtc gagcgcccgc atgcgggcgt tgctagcgca ccgtgttcac ctggtaccga
     3421 tccatgccga tcaggccggc agcatcgcca agcaaggcaa ctaccaggtg ctgatcaagc
     3481 cgtggaagga atacgatttc tggtcgaacg aggtctgggc ggtcaacggc aagtggttgc
     3541 aggacccgct caaccagaaa gtcgtcgtcg acgtcatgga ggctcagttg cgcgccaacc
     3601 gctccgccac caccgacttt ccgtggttcg cgggaatgtt ccgcaaatac agcaacgacc
     3661 gcgacgccgc acactggccg gacgaacgga ttcatgacga atggacgttg ctggcacagg
     3721 aaatcaaggc ctggccggag ccgatgccgc tcgacctcgc gtcgttcaac aaaatgattc
     3781 cgatctatca gaaggctggg atcgtttcgg ccggcgccag tttcgacaag atcatcgagc
     3841 cccgatacct ggccgaagcg cagagccgga tcgggtgacc cgggtcctgg aacagcgccc
     3901 atcggtccaa ccgacgaccg ccgcgccgaa actgcgcacc accggcctga cacgccggtt
     3961 cgcacaaggc ggcttgacgg tgttcgagga cctgacgctc gacgtcgaga acctgcagtt
     4021 cgtggcgatt atcgggccca gcggatgcgg caagtcgacc ttcctgcgca tcctgaacgg
     4081 gctcgatcag gccgacagcg gaaccatcga aatcgacggc cggcgcgtga ccggcccagg
     4141 tgcgggccga gcgatggtgt tccagggctt cgatctgttt ccatggcgaa cagcgttgga
     4201 gaatgtggca ttcgggctgg agatgcaggg ccattcgaaa cgagaacgct tggcagccgc
     4261 ccgccaatac atcgatcttg ttggcctgac cggatttgcc caatcctatc cccaccaact
     4321 ttccggcgga atgcagcaac gagtcgggat cgcgcgtgca ttagcggtgc gccccgacat
     4381 tctgctgatg gacgaaccgt tcggtgcgct cgatctgcaa acccgtgacc tgttgcagga
     4441 tgaactgctg cggatctggc agaacgaccg gaagaccgtg ctgttcgtga cccacagcat
     4501 cgaggaagca atttatctcg ccgaccgtat cctggtattt tccccccgtc cggcatgcat
     4561 cgagcgcgat atccttgtgc cgttcgcacg acctcgggac gaagagatga agaccagcgc
     4621 tgatttcctg gccattcgcc gcgaaatttg gggcctgctg aagcacggca ccagctaagc
     4681 cgaagcccgc accatcgccg cccccttctc agcgatcatg atcgtcggcg cattggtatt
     4741 ggtcgaagtc accgccggca tcaccgaggc atcgatcacc cgcagcccct gcaacccatg
     4801 cacccgcaac tggtcgtcaa ccaccgacat cggatccggc cccatgcggc acgaacaact
     4861 ggcatggaat accgtcgttc cggtctgccg agcaaacgca acgaattcat cgtctgtctg
     4921 cacatccggt cccggcagcg tttccgccac cagatagcgc gccagcgccg gcgcctggaa
     4981 ccattgccgc acccgccgca gtccaccgac gatcgcccgc cggtcgcgtt cgtcgtccag
     5041 atagcgcggg ttgatcgacg gctggtcctc cggccgaggc gaccgagcct cgacatgtcc
     5101 ccggcttaac ggccgcatct gccatacacc gctggtcata cccggttcat ccgccaatcg
     5161 ccgcttcggc ccgggcgcgt aactggccga ggcaaacagc gcctgcacgt caggtgttgc
     5221 cgattccggc aacaccttga ccgacgccgc cactagggag gcaccgtaag tcagcagtcc
     5281 tcgcccggtc agcacatagc gcatcacctc gccgaccaac cctagaccgc gcgatttctc
     5341 gttcagggtc gcaacgtcct tcacctcggc cgacacacgg gccaggaaat gatcctggaa
     5401 attccgcccc acccccggca acgcatgctg caccgaaatc cccacccgcc cgagatgctc
     5461 gggatcgccg acaccggaaa gctgcaggat atgcggggat ccgatcgcac cggccgacaa
     5521 gatgacctcg gcggtggcat ccgcccgttc cattttccca tcacgcgaaa acgccacacc
     5581 caccgcgcgc gcgccatcga acagcacccg ctgtaccagc gcattggtca cgacctgaag
     5641 gttcggccgc ttcttcgccg ggttgagata cgaccgagca gcactggctc ggaatcggcc
     5701 gccgcgagtc tgctggatcc agccaatgtg gtcacccaac cctggcggca ggtcgttgac
     5761 gtccctgcgg tattcccatc ccatctgctt gccggcctcg accgccgcca ggcacagttc
     5821 cggttggtcg cgggtcggcg aagtgaacaa cgggccgcct ttgctgtgga cgtcgtcggc
     5881 ttggccttcc cagttctcgg ccttcttgaa gaacggcagg acgtcgtccc acgaccagcc
     5941 acgattgccc aactgagccc agtgatcgaa atcctcgggt tggccgcgga tatagatcat
     6001 gccgttgatc gaactggacc cgcccagcac cttgccccga ggatacgcga tcacccggcc
     6061 attcagaccg gactcagaat cggctttgta gccccaggtc acacgcgggt ggtccagcat
     6121 cttcatgtag ccggccggaa tgtgcagcag cgggtgccag tcacgtccac cggcctcgat
     6181 caggatgacc cgcgtattcg ggttctcggt cagccggttc gccagcacac aacctgccga
     6241 tccggccccg acgatgacga aatcagcttg cattggcgtt tcctcgcttg tcccaccatc
     6301 taacggcggc cgacggttcg tgccaaggtt gaacgcggga ggcatccacc atggcacaag
     6361 aagaaacgtt cgacgtcgcg tacctggtgc ttagtggcac cacgacggca gcgcggtgcc
     6421 cggaattgtt gcgcggcctt atcgggctag gtttcccgac cgttatcgcc attccgacgc
     6481 cgaacgcatc gcgggtgatc gcgccgcgcg aactggcgga cgtagcgggt gcgcgagtgg
     6541 tcgagtcgta tttcgatgcc gccatccgac cgaggccacc gcgcggcgtc gtgctgtttg
     6601 cgccgtgcgg cttcaattcg ctcaacaagc tggcacacgg gaccgccgac accctggcgc
     6661 tgtccgtggt ggccgaggcg atcgggcgag gcacgccggt gatcgtgggc ccgtcgttga
     6721 accagccgct gctggaccat ccggtggcgc ggacatcgct cgtgacactg gccggctggg
     6781 gtgtgaccat cgtgccgatg gccgacgaaa gagacggccc acgcctcgcg cccacgcccc
     6841 aactgctgaa tgcggtgcgt ccctatgtgc aacaacgctg accattgaac atccggcaga
     6901 cccgccgtat ccacagatca ccatcattca cgaggttaac accatgaatc tgacatccgg
     6961 actagtcggc gccgaaaaaa ccggcggcat cggctggctg atctgggaca accccagcaa
     7021 gctgaacgcc ctgtcccccg ggatgtcaga ggacgccctg accgtgattg cggcctacga
     7081 agccgatccc gccatcaagg tcgtgattat gcgcggcgcc ggtcgcaagg cgttcatctc
     7141 cggcggcgac atcaagagtt tcgacaaaac ccgcgccgat cccgaaaccg cccgcctcgc
     7201 tcgggaagca ccgggcaaat tgcgactgaa aatgctgaac ctggagaagc cgctaatcgc
     7261 gatgatttac ggctattgcc ttggtggcgg cctgggcatg gcattgaacg cggacctgcg
     7321 gttcgcctcc tccgacgcgc aattcagcgt accggcggca ctgcgtggca tcgcctatgc
     7381 gcctgagggc ctaaaatcgc tggtcgatct ggtcgggccg agcatcgcca aggacatcat
     7441 gttctcaggc cgtcgcctga agaccgagga agcgctgcgg atcggcctga tcaaccgcgt
     7501 ggttgacgcc gaaacgctgg aggccgaaac catcgcttac gccgaaaccc tggcggcgaa
     7561 tgcgcctttg tccatccggg catccaaata cttcatcaac cagcttggcc tggaacgcgc
     7621 ccagcgcaat gaggcccgca tggacgcgat gcagcgggag gctgaggcca gcgaggactt
     7681 caaggaagcg acgctgtcat tcctggaaaa gcggaagccg gtgtttcagg gacggtaaga
     7741 cccgcctatc atcgtgcgca tgatctaacc aaagcgatga acgcaaccgg catcaaaacg
     7801 aagaaggcaa cggttaagga agcctgatgc cgccttgttc agcgtcaccg tcgtttagcc
     7861 gctctcgcca agatggcggg gctcggctgg gacggtgact tggcggccat gtgagagagt
     7921 cgtgattacg tttcccagtg atcatcattc agcctagatc gcacaccttc gtggcccgcg
     7981 aacgcataca aggcgccgta gccacccaaa ggattttcat ccagccgacg cccccttaaa
     8041 caattccccg tacccgaaaa tccgcgatcg ccgccgcatc gtaccccaat tcccccagga
     8101 tcgcatcggt gtgctgcccc aggtccggcg tcgcccccag aatctccggc tggggattat
     8161 cgctcaggtt gattggctgc cccaccaccc gaatatcccc cagcttggga tgatgcaccg
     8221 cccgagcaat ccccagatgt tgcgtctgcg gctccgcgaa cacccctgcg atatcgttga
     8281 tcggcccaca aggcacccca gccttattga tcacctccag ccaatgcgcg ctcggttttg
     8341 tccgggtgat cgcgccgatc cgctcattca gcaccttgcg gttcttcgac cgtaggccgc
     8401 cgttcgcata atccggatcg gacagcgcct gctgccagcc gatcgccttg cagaaccgct
     8461 cccacaatcc ctgccccgac gccgcgatgt tgatgtgccc atccgctgtc ggaaacaccc
     8521 cggtcggaat cccggtcggg tgatcgttgc cggcctgacc gggcacctca tgcgccatca
     8581 gccagcgcga ggcctggaag tccagcatga agatctgcgc ctccagcagc gaggtatgca
     8641 cccactgccc cttgccggtc tgcgcccgct gcatcagcgc cagcaggatg gcctgagaca
     8701 ggaaaatccc cgctgtcagg tcggcgatgg gaatccccac gcgcaccggc ccctgccccg
     8761 gcagaccggt gatcgacatc agcccgccca taccctgcgc gatctgatcc acgcccggac
     8821 gggtcgcatc cggcccactc tgcccaaacc ccgaaatact gccatagaca atccgaggat
     8881 tcaccgcggc gatcgtatcg taatccacct tcaaccggta tttgacgtcg gagcggtaat
     8941 tctccaccac cacatcggcc cgcgacgcca gcttcatgaa gatggcgtgc gcctcgggcg
     9001 ttttcaggtt cagcgtcatg ccgcgtttgt tgcggtgcaa gttctgaaag tcgaagccat
     9061 ggcggttgcc gccgacgacg tcgcccttgg cctcgcccgg cggctcgatc ttgatcacgt
     9121 ccgcacccca gtccgccagt tggcgaaccg cggtcggacc ggcgcggtgg gcggtcagat
     9181 ccagtacgaa cagacccttc agcggaagat cagccatcgt cctatgcccg ccccgtcgcc
     9241 gcatcccacc acggacagac accatccatc cgctgatagt tgccgtcgat cacgtgcagc
     9301 ggctcccgcg tcccatccgc ggcggctttc aggcgcatat cgcgggcctt ctgccgctga
     9361 tccgccggca gccaggcccg gtcatgcccc cacaggctgg gaccgacggt cacctcggta
     9421 ggtgtccagt tgcccggcgt cacctctttg ccgccccagc catattccag catgaagccg
     9481 cccggcgagc gcaggtagta cgacgtcacc gcgtcattcg gatgccgccc cagcgtcgtc
     9541 gcgatccgct ccggctcgcc cagcgcgata tcatacccct gcccgacatc gtccagcgag
     9601 aacagttcca ccatcagatg atgcagatcc tgcttgccgg tttcgatcag cgccaccgag
     9661 tgatgccgag cattggtgtg caggaaatac gcccggaatg gcgtggagat gtagtcgctg
     9721 acgccaaacc ccagcaggtc tttgtagaac cccagcaggt cgtcgatgtt tttgacgtgg
     9781 aacaccacgt gccccatgcc cagcgcgccg gtgcggaagc ccgagatcga tcgtcccggc
     9841 cggaacggtt cgctggcgat ggcggcgccg tgaaacgctt ccaggtggtt gccgcccggg
     9901 tcgtcgaagc tgatcaggtc cttgacgaag cgctggtcgg ccagtgactt cggctcttgg
     9961 cggaccttga cccccgcggc gtcaagcctg gcggcaagcg atttcagcgc ggcggcgtcg
    10021 gcgacctcga agccgaaata ccgctctccc tcggcgagcg accgatcg
//
LOCUS       DATAVD010000787         3111 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1003756, whole genome shotgun sequence.
ACCESSION   DATAVD010000787 DATAVD010000000
VERSION     DATAVD010000787.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3111
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1003756"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            441..1871
                     /locus_tag="VHX39_15090"
     CDS             441..1871
                     /locus_tag="VHX39_15090"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HEX3992493.1"
                     /translation="MTRNDQTSVGKSALFPMPEDRTRIDDLLTRQLRDANDRVVAGHV
                     SPTIDLAEFKKELTAFDFGQPRLSEDTLAWIIARLEDGITHITNPRYFGLFNPAPTFP
                     AQCADRIAAVFNPQLATSTTSPVPVALEAHVIRAIAQRAGFPETASGHFTTGGAEANY
                     TALICALTRACPGFALDGARAFSGNPKFYISRESHLAWLKIAHQAGIGRSAVRLVATD
                     GTGRMSVAALQAAIAEDLVNGQVPVMIVATAGTTNAGMIDPLAACGEIAREHGAWFHA
                     DAAWGGAVIASDRLRGLLAGIEAADSMTIDAHKWFATTMGCGMFITRDPGLLSSAFQV
                     STTYMPSNLKSLDPYVTSMQWSRRFLGLRLFLSLAAAGWAGYGEHIEHSVELAASLAH
                     ALRSLGWTVVNDSQLAVLCIQPPSGSSDVGSIVSKVLQSGRAWISTATFEGQAVIRAC
                     LTHGETTQHDVDQLVDALRAAQYGRA"
     gene            2022..>3111
                     /locus_tag="VHX39_15095"
     CDS             2022..>3111
                     /locus_tag="VHX39_15095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992494.1"
                     /translation="MNSISPLTRYGIAGLRRCWMPEHARWSHKYHLDGRPSPNESIPH
                     SDLYYSLNVLLGFAGVRQALANEPYDVQVLFNALCGELPNHAVRNGAWGMALWAAAEL
                     NLDTPGLAADRVRQVASDPTTAATWTAQDVGLSLSGAATQARRDQSWHAVARPLAEVL
                     IKHFRGPGALFRDSGHGPRRHFATFATQVYAAMSLYQYGEVTGDGDAVAVANACVAKL
                     IELQGPLGEWPWFYLPRADRVLDPYEIYSVHQHGMAPALLHHAVRHDVPGAREAIVTG
                     FRWIFGANEMAVSMLRPDLQLIYRSQRRRGLGGRREARLMRAAVAATVGTGAWPSVKV
                     PLELTKEMRSYEFGWLLWSFGGRDDYSEL"
BASE COUNT          542 a          926 c         1005 g          638 t
ORIGIN      
        1 gacgagcttt gccgtcaggt cctgtttcgg ccttccgttc gccgacccct cacaaacaat
       61 gaggtttacg gtcagccgac gccgatacag ggccaatttc cgcgtgagaa atgtgtcctc
      121 tggcttaggc caagaatacc atagtcgggg caccctgggc gacacatttc gcttcgccca
      181 aacccgatga ccgacaccgg ccgcatatgc aaattacaat catgggtcgc gatgacccgg
      241 ccgcgctttg gaattgctag gtaagaatgg agtagatagc ctgcttgcgg aaaggtccgg
      301 tccacgaaca tggagacgag attgcgagac cagcctggca tgctgcttcc agccttaaac
      361 tgctctgtcg gcccgtttgc gatttgtcca atggcagccc cgatccgaac tgccgccgac
      421 acgaggcaag tgcggcgccc atgacccgga atgaccagac atccgtcggg aaatccgcac
      481 tgtttccgat gccggaggac aggacgcgca tcgacgacct gctgacaagg caactgcgcg
      541 atgcgaacga tcgagttgtc gccggccatg tgtccccgac catcgatctc gcagaattta
      601 agaaagaatt gacggcgttc gattttgggc aacctcggtt gtccgaggat acgctggcct
      661 ggattattgc acggctggaa gatggcatca cgcacatcac caacccgcgc tatttcggct
      721 tgttcaatcc ggcaccgaca ttcccggcgc agtgcgccga ccgcattgcc gcagtgttca
      781 atccgcagct tgccacttcg acgacgtccc cggtgccggt tgcgctcgag gctcatgtca
      841 tccgcgcgat agcccagagg gccggcttcc ctgaaacggc gagcggacac ttcaccaccg
      901 gcggcgccga agcgaactac accgcgctga tttgtgcttt gacgcgcgcg tgtcctggct
      961 ttgccctcga cggcgcgcgt gcgttcagcg gcaatccgaa gttttatatt tcgcgggaat
     1021 cccatctcgc ctggctgaag attgcccatc aggcggggat cggccgctct gccgtgcgac
     1081 tggtggcgac cgacggtacc ggccggatgt ctgtcgctgc attgcaagcc gcaatcgcgg
     1141 aggacctcgt caacgggcag gtgccggtca tgatcgtcgc cactgccggg accaccaatg
     1201 ccggcatgat cgatccgctg gcggcctgcg gcgaaatcgc ccgcgaacat ggtgcctggt
     1261 tccacgccga tgctgcctgg ggcggcgcag tgattgcttc cgaccgtctg cggggcttgc
     1321 tggcgggtat cgaggcagcc gactcgatga ccatcgatgc ccataagtgg ttcgccacca
     1381 ctatgggctg cggcatgttc atcacccgag atcccggatt gctctcgtct gcgttccagg
     1441 tgtcgaccac atatatgccg tccaatctga agtccctcga cccgtatgtc acctcgatgc
     1501 agtggtcgcg gcggttcctt ggcctgcgac tgtttctgtc gctcgccgcg gccggatggg
     1561 ccggctatgg cgagcacatc gaacattccg tcgagctggc cgccagcctg gcccatgcgt
     1621 tacggtcgtt gggctggacg gtcgtcaacg attcgcagtt agcggtgttg tgtatccagc
     1681 cgccgtccgg ctcgtccgat gttggatcga tcgtttccaa ggtcctgcaa tcgggccgtg
     1741 cctggatttc gacagcgacc ttcgaggggc aggcggtcat tcgagcctgt ttgacgcacg
     1801 gcgaaacgac tcagcatgac gtggatcagc tggtggatgc tctgcgtgca gcccaatacg
     1861 gtcgcgcgta gcgtgcggac ggaggctgtg aaaaggaccg atgttgtgca caacctggcg
     1921 tagccccgat gcgggggaac tgtgactgct acacgcaccg aatgcgttgg ggcgcagatg
     1981 acggcaattg ttacgagcgc aaagccaaag ggattctgtg catgaacagc atcagtccgc
     2041 tcactcgcta cggcatcgcg gggttgcggc gctgttggat gcccgagcac gccaggtggt
     2101 cgcacaaata tcacctggat ggccggccgt cgccgaacga gtcaattccg cacagcgatc
     2161 tttactactc gctgaatgtg ttgctcggtt ttgccggggt gcggcaggcg ctggcaaacg
     2221 agccgtatga cgtgcaggta ttgttcaacg cactgtgtgg cgaactgccg aatcacgctg
     2281 tgcggaacgg cgcatggggc atggcgcttt gggccgctgc ggagctgaac ctggatacgc
     2341 cgggtttggc agccgaccgt gtgcgtcagg tcgcttcgga ccctacaact gccgcgacct
     2401 ggaccgcgca ggatgttggg ttgtcgttgt caggtgccgc aacccaggcg cggcgcgacc
     2461 aatcgtggca cgccgttgcc cgcccgttgg ccgaggtatt gataaagcat ttccgtggac
     2521 cgggcgcgct gtttcgcgac agtgggcatg gcccgcgccg gcatttcgcg acgttcgcaa
     2581 ctcaggtgta tgcggcaatg tcgctgtatc agtatggcga ggtgaccggc gacggggacg
     2641 ccgtcgcggt ggcgaacgcc tgtgtggcga agttgatcga attgcagggg ccgttgggcg
     2701 aatggccgtg gttttatctg ccgcgggcgg atcgcgtgct tgatccttat gaaatttact
     2761 ccgtgcatca gcacggcatg gcgccggcgt tgttgcatca cgccgttcgg cacgatgttc
     2821 cgggcgcgcg cgaggcgatc gtaaccgggt tccgctggat tttcggtgcc aatgaaatgg
     2881 ctgtgtcgat gctgcggccg gatttgcagc tgatttatcg ctcgcagcgg cggcgcggcc
     2941 tgggtggacg ccgcgaggcc cgcctgatgc gggctgccgt ggccgcgacc gtcgggaccg
     3001 gcgcctggcc gtcggtcaag gtgccgctgg aactgaccaa ggaaatgcgc agttacgagt
     3061 tcggctggtt gctgtggtcg ttcggcgggc gtgacgatta ttccgagctc a
//
LOCUS       DATAVD010000788         6056 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_633173, whole genome shotgun sequence.
ACCESSION   DATAVD010000788 DATAVD010000000
VERSION     DATAVD010000788.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6056
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_633173"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1202)
                     /locus_tag="VHX39_15100"
     CDS             complement(<1..1202)
                     /locus_tag="VHX39_15100"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3992495.1"
                     /translation="MKPFPDANAWRAACRDDPVLAVWAGDWSAGFAIECDTAAVSFDF
                     VNGIVQPGEGTPQFRLAAPFGVWEKFLAPVPPRHHHGIFAMLYRVPEFQIKGDTMAFM
                     QHAHLARRVLEIGKWLALGHPAPAPVSLAPRGDQRAVPAVTGGYVPVTVAGTTWQIHY
                     ETAGSGRDLLCMHTAGADGRQFHGLMADPRVIAGHRLVAFDLPWHGKSPPPDGAIPGS
                     WRLNTDLYVDLIMGFIAAAGLQRPIALGASMSGEICLELAYRHPEAFSAIIACEACEQ
                     VSRRQTQWASHPQVNQSLFVPEWIRGLSAPQSPAEWQEQITWQYGQGGPAVFFGDIAF
                     YSGDWDARERVGRIDTNRCPLFMLTGEYDYSCTVEMSAATAAKIPGVRFQAMAGIGHF
                     PFAENPPL"
     gene            complement(1199..2083)
                     /locus_tag="VHX39_15105"
     CDS             complement(1199..2083)
                     /locus_tag="VHX39_15105"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3992496.1"
                     /translation="MPQTPDPIRTLGFIGLGVMGEPMCGHLARRAGKPILAYDLRPEP
                     LERLASNAVTAATIGEIATRADLILMSLPDGKAMASVVAALEPHLRPGQCVVDTSTSS
                     VALTREIGARLTARGIRFADAPVARTREAAARGELSIMVGADEATFLHVRPILQTMGT
                     DVTHCGPIGCGQVVKILNNMLVFQHCAALAEAIAIGRRNGVAPEVLLPTMAMGSGDSF
                     VLRNHGMKAMLPREFPLRAFSTRYAIKDLSYALEMAEAAGLDMKAAKLTMERLQQTEA
                     AGFADEYHPVVLNVIDPL"
     gene            2385..4070
                     /locus_tag="VHX39_15110"
     CDS             2385..4070
                     /locus_tag="VHX39_15110"
                     /inference="COORDINATES: protein motif:HMM:NF025082.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3992497.1"
                     /translation="MPRIVALSMVKNEQDIIEPFVRHTSMFVDDHVILDNGSVDETRR
                     ILIDLMREIDGVIVTTCSEFGYSQSERMTRLLRSCQTAFFADYVIFLDADEFISSATR
                     AEFEAILCGIPAGGFGRIPWRTHVLAPFDRDPDHNDPPRSMPWRRANEHARYNAVLRL
                     DGKYWHDLVVAQGNHDVTSSTARAVPAVFLDGLYLNHFPLRSMDQFLAKSIVGWMAYL
                     GKDAHAGKKGDGYHWRHNFHLAVNGAPIRYEDLCDLSMRYDQPHREYDWSTDVVRDVP
                     PDRYERRYSSGKYAEPLALVAKSWQATLEARDPLVTFTCPDVPVAADEKSAAETEFNA
                     QWHWDNPFADVAPFRYLAEKYRPQSVLDVGCGIGAYVTIFKNLGVKNVFGADCIAKSA
                     TMLRDDEYRKVDLARPFSLGCKYDIVMCLEVAAHSPVDAAAKLLASLSSHAGGLIVFS
                     AAAPGQPGHGRIGCIPIEQWLRHWQALGWSPSLQETMAMRALSTLSWFKHNIVVLRQG
                     ADRCSEAALRELESIGSLPFGWPHTNPGIRAEVLIEDVPHPPLGYKSEVQAGA"
     gene            4254..5960
                     /locus_tag="VHX39_15115"
     CDS             4254..5960
                     /locus_tag="VHX39_15115"
                     /inference="COORDINATES: protein motif:HMM:TIGR01681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIC family phosphatase"
                     /protein_id="HEX3992498.1"
                     /translation="MSSETTDTPSDQTLFDEVWYLNTNPGIAQAVRDGAFRSAWEHYV
                     RHGRAEGRYPSAWATLSGAGAKGATHHRGGNAVASYPEHNWTGFLTPTDLATTPTRLS
                     RVAVVATALLLELRFHERNRSECQVDLIGIDPVSGGLGPAPVPPGFYDFIIVHVPLGD
                     VIAEDALSHIPLADIAAHDAVLQQTRIALETRLQAAMQWNRQSGVLTFVANYFAPQRN
                     SLGRLFPRYDIRNPEYFVDRVNEHLETIVRQAANAYVLDLDRMSASIGRRFTQDDAVF
                     AMAQNGLMPFGGANHARIEPMAALLDHYDVQWHYVLPNMAWAELLAMYGAVRATDTVK
                     LVVVDLDDTLWNGAAPIMAGWPVGLAEALLYLRKRGISLAIVAQGEQADVRDAWPKIF
                     GRHLRLEDFAAICISQAPKPDNMRALLTAMNVPPKHVVFIDDDPAQREAMQQAFPDLR
                     VLGRYPYYLRRILLWSSQTEVGPVAEDGQPLIELARTILDGVKQRAELPWQALTVELW
                     TQIESAAPGAAREILGLLWEQAMDNAITADQADVIRRLCMAIAIADRGADRIGVVPGW
                     DG"
BASE COUNT         1130 a         1811 c         1906 g         1209 t
ORIGIN      
        1 aacagcggcg ggttctcggc gaatggaaaa tgcccgatgc ccgccatggc ctgaaaccgc
       61 acgccaggga tttttgcagc cgtggctgcc gacatttcca ccgtgcagga gtaatcgtat
      121 tccccggtca gcatgaacag cgggcagcgg ttggtatcga tccggccgac ccgctcgcgc
      181 gcatcccaat cgcctgaata aaacgcgatg tcgccgaaga ataccgccgg tcccccctga
      241 ccgtactgcc aggtgatctg ctcctgccac tccgccgggc tctgcggcgc cgacagaccg
      301 cggatccact ccggcacgaa caggctttgg ttcacctgcg gatgcgacgc ccattgggtt
      361 tgccggcggc tcacctgctc acaggcttcg caggcgatga tggcggagaa cgcctcaggg
      421 tgccgataag ccagttccag acagatttcc ccggacatcg atgcgcccag agcgatcggt
      481 cgctgcaatc cggcggcggc gatgaaaccc atgatgagat cgacatagag gtcggtgttg
      541 agccgccagg aaccggggat cgctccatcg ggcggcggcg atttgccgtg ccagggcagg
      601 tcgaaagcga ccagccgatg gcccgcgatg acgcgagggt ccgccatcag tccgtggaat
      661 tgccgcccgt cggcgccagc ggtgtgcata cacaaaaggt cgcggccgga accggcagtt
      721 tcgtaatgga tttgccaggt cgtgccggcc acggtcaccg gcacgtaccc tccggtcact
      781 gcgggaaccg ctcgctggtc gccgcgtggc gccagcgaca ccggtgcggg cgcgggatga
      841 cccaacgcca gccacttgcc gatttccagc acgcggcggg cgagatgcgc gtgctgcatg
      901 aatgccattg tgtcgccttt gatctgaaac tccggcaccc ggtacagcat ggcaaagatg
      961 ccgtgatggt gccgtggcgg caccggcgcc aggaatttct cccacacgcc gaagggtgcc
     1021 gcgaggcgga actgtggcgt cccctcaccc ggctgcacga tgccgttgac gaagtcgaac
     1081 gataccgcgg cggtatcgca ttcgatggcg aagccggcag accaatcgcc ggcccagacc
     1141 gccagcacgg gatcgtcccg gcaggccgcg cgccaggcgt tcgcgtcggg gaacggcttc
     1201 ataacggatc gatcacattc agcaccaccg gatgatactc gtcggcaaaa cctgccgcct
     1261 cggtttgctg caaccgttcc atggtcagtt ttgcggcctt catgtcgagg ccggctgcct
     1321 cggccatctc aagcgcatag gacaggtctt tgatcgcata gcgggtggag aatgcgcgca
     1381 acgggaattc ccgcggcagc atcgctttca taccgtgatt gcgcaggaca aagctgtcac
     1441 cggagcccat tgccatggtc ggcaacagta cctctggcgc aacaccattt cgccggccta
     1501 tggcgatcgc ttcggccagc gcggcgcagt gctgaaacac cagcatgttg ttgaggattt
     1561 tcaccacctg gccgcagccg atggggccgc aatgggtcac gtcggtgccc atggtctgca
     1621 ggatcggccg gacgtggaga aaggttgcct cgtcggcgcc gaccatgatc gacagctcgc
     1681 cgcgtgcggc ggcctcgcgg gtgcgcgcca ccggtgcgtc ggcgaaccgg atgccgcggg
     1741 cggtcagccg tgcgccgatc tcccgcgtca gtgcgaccga ggaggtgctg gtgtccacca
     1801 cgcactgacc tggccgcaaa tgcggctcca gtgcggcgac gacgctggcc atggctttgc
     1861 cgtccggcag cgacatcaga ataaggtcgg cgcgggtggc gatttcgccg atggttgcgg
     1921 cggtcaccgc gttcgacgcc aggcgctcca gcggctcggg ccgcaggtca taggccagga
     1981 ttggtttgcc ggcacggcgg gcgagatggc cgcacatcgg ctcgcccatg acgccgaggc
     2041 cgataaagcc aagggtccgg atcgggtcag gggtttgggg catgggtttc ggcgtctccg
     2101 tggtttctgc cggaggcttg ctacttcccg gcgttcgtca agtcccatgc tttggggcgt
     2161 tccggcaggc cgaccggcct cgatctgagg gcagcaggta gttctggata ttttgccagg
     2221 atcggactat cggagcgacg gtttcgggca gcgtacggat tggcggtcag atcggccggc
     2281 gagtgaactg ttgcatgccg atgccaggcc atgttgcctc gtcgtattat tccgacgtaa
     2341 caactgtttt gactggcctg acgaaaccgt gaggtaggaa taccatgccg cgtattgtcg
     2401 cgctttccat ggtgaagaac gagcaggata tcatcgagcc gtttgttcgc cacaccagca
     2461 tgttcgtgga tgaccatgtc atcctggaca acggctcggt tgacgagaca aggcggattt
     2521 taatcgacct gatgcgggag attgatggcg ttatcgttac gacgtgctcg gagttcggct
     2581 actcgcaatc cgagcggatg acgagattat tacgatcctg ccagacggca ttctttgcag
     2641 attatgtcat ctttcttgat gccgatgaat tcatatccag cgcaacaaga gcggagtttg
     2701 aagcaatact ttgcggcatt cccgccgggg gttttggccg aatcccatgg cggacccatg
     2761 ttctggcgcc gttcgatcgg gacccggatc ataatgaccc acctcgatcc atgccgtggc
     2821 gccgtgccaa cgagcatgca cgctacaacg ccgtactgcg tctggatgga aagtactggc
     2881 acgatctggt ggttgcacaa ggcaaccatg acgtaacgtc gagtactgca cgagcggtgc
     2941 ccgcggtttt tctcgacgga ctttacctta atcattttcc gttgcgaagc atggatcagt
     3001 ttctcgcgaa atcgatcgtc ggctggatgg cataccttgg aaaggacgct cacgccggca
     3061 agaagggtga cggctaccat tggcgtcata attttcatct ggcggtgaat ggtgcaccga
     3121 tccgatacga ggatttgtgt gatctgagca tgcgctacga tcagccgcac cgtgagtacg
     3181 actggtcgac cgacgtggtt cgggacgtcc cgccggaccg ctacgagcgg cgctattcgt
     3241 ctggaaaata cgcggaacct ttggcactgg tcgcaaagtc atggcaggcg acgctggaag
     3301 cgcgcgatcc gctggtgact ttcacctgtc ctgatgtccc ggtcgcggca gacgagaaat
     3361 ctgccgccga aacggaattc aatgcgcagt ggcattggga caatccgttt gccgacgtgg
     3421 cgccatttcg atatctggca gaaaagtacc ggcctcagtc ggtgctcgac gttggttgtg
     3481 gcatcggtgc ctatgtcaca attttcaaga atcttggtgt gaagaacgta tttggtgccg
     3541 actgtatcgc aaaatcggcg accatgttga gggacgacga ataccgcaaa gtggacctgg
     3601 cacggccgtt ttcattgggt tgcaaatacg acattgtcat gtgtctggaa gttgccgcac
     3661 acagtcccgt cgatgctgcg gcaaagctcc tggcatccct gagcagccac gcaggagggt
     3721 tgatcgtgtt ttccgcggcg gcgccgggtc aaccgggcca tggacgtatt ggctgcattc
     3781 cgatcgagca atggcttcgt cactggcagg cgttgggttg gagcccgtcg ttgcaggaga
     3841 caatggcaat gcgcgcatta tccacgttat cctggtttaa gcacaacatc gtcgtcctgc
     3901 ggcagggtgc cgatcggtgc agcgaagcgg cacttcgtga actggagtct attggttcgt
     3961 tgccctttgg ctggcctcat accaatcctg gaatacgtgc agaggtgctg attgaagatg
     4021 tcccgcaccc cccgcttggt tacaagagcg aggtgcaggc cggcgcctga agcaaccggg
     4081 cgccatgccc ggtggatggc cggtctttaa gtccgacgag cacagttgcg tctccgcaat
     4141 cgggcatccg gatgtggcat atcccgcgtt cccgcctttc cggtggcgtt gcgccgttcg
     4201 gacgtgtaat ctgttgacca gacgtagtca ggcaaccggc ttttggaagc ggcatgagtt
     4261 ccgaaacgac cgacactccg tcggaccaga cgctgttcga tgaagtctgg tacctgaata
     4321 ccaatcccgg gatcgctcag gcggtacgtg acggcgcctt ccggtccgcc tgggagcatt
     4381 atgtccggca cggccgcgcc gagggaagat acccctcggc atgggcaacg ctgtccggtg
     4441 ccggggccaa aggtgccacg caccatcgcg ggggcaacgc ggtcgcgtcg tatcccgagc
     4501 ataactggac cggatttctc acgcccaccg acctcgccac aacgccgacg cggctgagcc
     4561 gtgtcgcggt ggtcgcgact gccctgctac tggagttacg ctttcacgag cgaaatcgtt
     4621 ccgaatgcca ggtcgatctg atcggcatcg atccggtctc cggcgggctc gggccagccc
     4681 cggtgccgcc cggattttac gatttcatca tcgtccatgt tccgctcggc gatgtcatcg
     4741 cagaagacgc tctgtcgcac attccgctgg ctgacatcgc cgcccatgac gccgtattgc
     4801 agcagacccg catcgctctt gagacccgtt tgcaggctgc catgcaatgg aatcggcaat
     4861 cgggcgtgtt gacgtttgtc gccaattatt tcgccccgca gcgaaattcg cttggccggc
     4921 tgtttccccg atacgacatt cgcaaccccg agtatttcgt cgaccgcgtg aatgagcatc
     4981 tcgaaacaat cgtccgccag gcagccaatg cctacgtgct cgacctcgac cgcatgtcgg
     5041 cttcgatcgg ccgccgtttc acgcaggacg acgcggtgtt cgccatggcg caaaacggcc
     5101 tgatgccgtt cggcggcgcg aaccatgccc ggatcgagcc gatggcggcg ctgctcgatc
     5161 attacgatgt tcaatggcat tacgtattgc caaacatggc ctgggctgaa ttactcgcca
     5221 tgtacggtgc cgttcgggcc accgatacgg tcaaactcgt cgtcgtcgat ctcgacgaca
     5281 cgctgtggaa cggtgcggcg ccgatcatgg caggctggcc ggtgggcctc gccgaggcgc
     5341 tgctctacct cagaaagcgt ggcatcagcc tggcgatcgt tgctcaggga gaacaggctg
     5401 atgttcggga tgcgtggccg aaaatcttcg gccggcattt gcggctggaa gattttgcag
     5461 cgatttgcat cagccaggcg ccgaagcccg ataacatgcg ggcgctgctg acagccatga
     5521 acgtgccgcc gaaacatgtc gtattcatcg acgacgatcc cgcgcaacgc gaggcgatgc
     5581 agcaggcatt cccggatttg cgcgtcctcg gccggtatcc gtactatctc agaaggattt
     5641 tgctttggtc gtcccagacg gaggtcgggc cggtcgccga agacggtcag ccgttgatag
     5701 agttggcccg aacgatcctc gacggtgtga agcaacgcgc cgagcttccc tggcaggcat
     5761 tgaccgttga gctttggacg caaatcgaaa gcgcggcccc cggtgcagcg cgggaaatac
     5821 ttggcctgct ttgggaacag gcgatggaca atgccattac ggctgaccag gctgacgtga
     5881 tccggcgcct gtgcatggca atcgccatcg cggatcgcgg cgccgatcgc atcggcgtgg
     5941 ttccgggttg ggacgggtaa tgaccaggac tctggtattc tgcacatcgt acgccgcatc
     6001 gatcccggcc tggaccacgc gataccgtct ctggctgaac gcgatccgcg ccagtg
//
LOCUS       DATAVD010000789         1981 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2306104, whole genome shotgun sequence.
ACCESSION   DATAVD010000789 DATAVD010000000
VERSION     DATAVD010000789.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1981
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2306104"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..893)
                     /locus_tag="VHX39_15120"
     CDS             complement(<1..893)
                     /locus_tag="VHX39_15120"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX3992499.1"
                     /translation="MSDAVSSAAVLHAPSRAAVNPWIVAAVVVVPTFMEVLDTTIAVV
                     ALRYIAGGLSATVDDGEWVLTSYLAANAIILPITGWLIAHLGRRNYFLLSIAVFTLAS
                     GLCGMATSLGQLILFRVLQGLAGGGLQPSSQGVLLDAFPVERQGMAMTLFGLAALIAP
                     VVGPTLGGWITDSYSWRWVFLINIPVGLLALGACSLTLRDPAYLTEKRMVLRKRPFSF
                     DGIGLSLLVIVIVCWEVTLSKGQEWDWLGDPSWRVQTLVTLFAVGLVGLIVWELRHPN
                     PVVNFRPLRERNFASCCIIIF"
     gene            complement(890..>1981)
                     /locus_tag="VHX39_15125"
     CDS             complement(890..>1981)
                     /locus_tag="VHX39_15125"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX3992500.1"
                     /translation="ASVHAIEAEAWSRRWNLQRAVEDVDNQVALLHSRVAGVDKSKAN
                     LVLARLQFDRAKQLVGRDDVPREVYDTRQAELTSSGAELTQALAAVYQLRVSLGLPAQ
                     PDGGGDLGQVPPDLDETFSSVLQAQAQLIQSAAQLGVVHSFDQGPKAMLDQFDTLGDV
                     NSTFAQYAASAPAVRQAQAKLEAAERDLAQAELDLRYTDVIADIDGVVTRRNVNPGNY
                     VQVGQNLMAIRSLNEIWVDANFKETQLRDLRIGQPVDLRVDMYGGKQVFKGRVEGFTM
                     GTGSTLALLPPENATGNFIKVVQRLPVRIDLVDYHADAAPLFIGTSVIPYVHINEEPT
                     GPDAGKLLQSYVAPGTGPVAAATASGGRQ"
BASE COUNT          423 a          615 c          591 g          352 t
ORIGIN      
        1 caaaagatga taatgcagca ggatgcgaaa ttgcgttccc gcaacggcct gaaattgacc
       61 accgggtttg gatggcgtag ctcccaaacg atcaacccaa ccaggcccac ggcgaacaag
      121 gtcaccaagg tttgcactcg ccaggatggg tcgcccagcc aatcccattc ctgaccctta
      181 ctgagcgtca cctcccaaca gacgatgacg atgaccagca gcgacagacc gatgccgtcg
      241 aaactgaacg gccgctttcg caacaccatc cgcttttccg tgaggtaagc ggggtcacgg
      301 agtgtgaggc tgcatgcccc gagtgccaga aggccaaccg ggatgttgat caggaacacc
      361 catcgccagg agtagctgtc ggttatccag ccgccaagtg tcggaccgac aacgggcgcg
      421 atcagcgccg cgaggccgaa cagcgtcatg gccatgcctt gccgctcgac cgggaacgca
      481 tccaacagca cgccctgact cgaaggttgc aggccgccac cggcaaggcc ctgcaggacg
      541 cggaacagga taagttggcc gagactcgtt gccatgccgc agaggcccga ggcgagggtg
      601 aacacagcaa tcgaaagcag gaaataatta cggcgtccga gatgcgcgat cagccagccg
      661 gtaatgggca agatgatggc attggcagca agatagctgg taagcaccca ttcgccatca
      721 tcgaccgtgg ccgacaagcc gccggcgata taacggagcg ccacgaccgc aatcgtcgtg
      781 tcgagcacct ccatgaatgt cggcaccaca accacggcgg ccacgatcca cgggttgacc
      841 gcagcgcggg aaggggcatg cagaactgcc gcagacgaca ccgcgtcgct cattgccggc
      901 cgcctgacgc cgtggcggca gccactgggc ccgtgcccgg tgcaacgtag ctctggagaa
      961 gcttcccggc atccggtccc gttggctcct cgttgatgtg gacgtaagga atcaccgagg
     1021 tgccgatgaa cagaggcgcc gcatcggcat ggtaatcgac gagatcgatc cgcaccggca
     1081 aacgctgcac caccttgatg aaattgccgg tggcgttctc gggcggcaac aatgccaggg
     1141 tggagccggt tcccatggtg aaaccttcga cccgaccttt gaaaacctgc tttccaccgt
     1201 acatgtcgac gcgcagatcg accggctgcc cgatgcgcag gtcgcgcaac tgggtttcct
     1261 tgaagttggc atcgacccag atttcgttga gcgagcgtat cgccatcaga ttctggccaa
     1321 cctgcacata attgcccgga ttgacattgc ggcgtgtgac gaccccgtcg atatctgcaa
     1381 tcacgtcggt gtaacgaaga tcgagttcgg cttgcgccag atcccgttcg gcagcttcga
     1441 gttttgcttg cgcctgcctg acggccggag cactcgccgc gtactgagcg aaagtgctgt
     1501 tgacgtcgcc tagtgtatcg aactggtcga gcatcgcttt cggaccctgg tcgaacgagt
     1561 gcacgacgcc gagttgtgcg gcactctgaa ttagttgtgc ctgcgcctgg aggacggacg
     1621 aaaaggtctc gtcgagatcg ggtggcacct gaccgagatc gccgccccca tcaggttgcg
     1681 ccggaagtcc gagcgagaca cgaagctgat agaccgcagc cagagcctgc gtcagttcgg
     1741 cacctgagct ggttagttcc gcctgtctcg tgtcgtacac ttcacgcggc acatcgtccc
     1801 tgccgacgag ttgctttgca cgatcgaatt gaagccgcgc caacaccagg ttcgccttgc
     1861 ttttgtcaac accggcgacc cgcgagtgca gcagcgcaac ctggttatcg acgtcttcca
     1921 cagcgcgttg cagattccag cgccggctcc atgcttcggc ttcgatggcg tggaccgatg
     1981 c
//
LOCUS       DATAVD010000790         2467 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1004142, whole genome shotgun sequence.
ACCESSION   DATAVD010000790 DATAVD010000000
VERSION     DATAVD010000790.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2467)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2467)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2467
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1004142"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..516)
                     /locus_tag="VHX39_15130"
     CDS             complement(<1..516)
                     /locus_tag="VHX39_15130"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HEX3992501.1"
                     /translation="MVQLAGGAFRMGTDTDVGFPADGEGPVREVTLDPFYIDIHPVTN
                     RTFREFVEATRYKTEAEKFGWSFVFEGDIPRKDYARLVQDTVRGSEWWCQVKGANWKH
                     PEGPGSALKTRWDHPVVHVSWSDAVAYAKWAGKRLPTEAEWEYAARGGLEQKTYPWGD
                     ELTPGGTHRCNI"
     gene            complement(894..2189)
                     /gene="fucP"
                     /locus_tag="VHX39_15135"
     CDS             complement(894..2189)
                     /gene="fucP"
                     /locus_tag="VHX39_15135"
                     /inference="COORDINATES: protein motif:HMM:TIGR00885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015535 - fucose:proton symporter activity
                     [Evidence IEA];
                     GO_process: GO:0015756 - fucose transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose:H+ symporter permease"
                     /protein_id="HEX3992502.1"
                     /translation="MLAFLLTTMIFFVWGMSNNLTDILVQQFRKSFELNLLQAQLVQT
                     AVFLAYFVMATPAALLMRRFGYKAGLVLGLVTFGVGTLLFWPAAVIGRYTPFLIALFI
                     VGSGSSILETAANPLVAQFGDPDTSERRLNFAQAFNPPGTIAGVLIGTWFIFSGTEKN
                     PAEIASMKLHGTYAAYLHSEILRVVPTYVVLGCAVLVLAAFIGRARFPGSLDASSVVG
                     DVSKSNAVSKGAYGRLLRNRSLMLAVVAQFFYVGAQVSTWSTLIPYLRTYTSIGDKGA
                     GYFLTGTLVALTVGRIVSTPLMRFINPARMIALYAIANCILLGVGIGHPGMVGASAIL
                     LTSFFMSIMFPTIFALGVKGLGDDTKIGGSFLVMAILGGALFPPALGWIAHATGSVAL
                     GYLLPAGAYVVVALYGFLVPSLMQGAVSQHAVEIAPRAL"
     gene            complement(2263..>2467)
                     /locus_tag="VHX39_15140"
     CDS             complement(2263..>2467)
                     /locus_tag="VHX39_15140"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEX3992503.1"
                     /translation="DETMRFTGPLRPPAPHEMGWKDVVQCPPETVTRIIVPFSPYAGR
                     YLWHCHILEHEANDMMRPYDVMG"
BASE COUNT          522 a          747 c          752 g          446 t
ORIGIN      
        1 gatattgcat cgatgcgtgc cgccgggagt cagctcatcg ccccaggggt aggtcttctg
       61 ctccaagccg ccgcgcgcgg cgtactccca ctcggcctcg gtcggcagac gcttgccggc
      121 ccacttcgcg taggcgacgg catcgctcca ggacacgtgc acgactgggt ggtcccaccg
      181 cgtcttgagc gcagatccgg ggccttctgg atgtttccag ttggcgccct tgacctgaca
      241 ccaccactcc gagccgcgga cggtgtcctg caccagccgg gcgtagtcct tgcggggaat
      301 gtcgccttcg aagacgaacg accagccgaa tttctccgcc tcggttttgt agcgcgtcgc
      361 ttcgacgaac tcgcgaaacg tgcggttcgt cacgggatgg atatcgatat agaacggatc
      421 gagcgtgact tcgcgtaccg gcccttcgcc gtccgcggga aagccgacgt cagtgtccgt
      481 tcccatgcgg aatgcgccgc cggccagctg aaccatgcct gcggtcgcgc cggatcgggc
      541 acgcactctg ggcgcgggga ccgcatcggg agccattgcg acggatgtcg cagacgtcct
      601 ttgcccggca cagcaggtct taggctcagc agctgcaaca ggatttgatg ggccgccggc
      661 ttccgtcacg cgcgcgaact ctcctttgaa aaactttgaa atagccacag cctcggcctt
      721 tccccagccg actcctgcta gagaaagtat gacattgctc ccctgtctct tgcagccatg
      781 aaggccgcag cagcaagaag atccgttatg ggcgttcctt caactccctt gatatcgacg
      841 ccaagcaatg ccaaacgcga ccttttctac cgaagaccgg tggaatggga tgttcaaaga
      901 gcgcggggcg cgatctccac cgcgtgttga cttactgctc cctgcatgag gctgggcacc
      961 aggaaaccat acagcgcgac gacgacatag gcccccgcgg gcagcagata gcccagggcc
     1021 acgcttcctg tcgcgtgcgc gatccagcca agcgccggcg gaaagagggc gccgcccaga
     1081 atcgccataa cgagaaagct gccgccgatt ttcgtatcgt ctcccagacc cttgacgccg
     1141 agggcgaaga tggtcggaaa cataatggac atgaagaagc tggtgagcag gatggcgctg
     1201 gcaccgacca tgcccggatg tccaatcccc acgccaagca ggatgcagtt cgcgatcgca
     1261 tacagggcga tcatgcgggc aggattgata aaccgcataa gcggcgtcga cacgatacga
     1321 ccaacggtca atgcgaccag cgtgcccgtg agaaagtagc ctgccccttt atctccgatg
     1381 gaggtgtacg ttcgcaggta cggaatgagc gtgctccatg tgcttacctg cgcgccgaca
     1441 tagaaaaatt gcgctacaac cgcgagcatc agactgcgat tgcgcaatag cctgccgtac
     1501 gctccctttg atacggcgtt cgatttcgac acgtcgccga cgacgctgct tgcatcgagg
     1561 ctgcccggaa atcgcgcccg cccgatgaac gccgccaaca caaggaccgc gcacccgagc
     1621 acaacatagg ttggcaccac acgaaggatt tcactgtgca gataggcagc gtacgttccg
     1681 tgcaatttca tggacgcgat ctctgccgga ttcttctcgg tacctgaaaa gatgaaccat
     1741 gtgccgatca atacaccggc gatggttccg ggcggattga aggcctgagc aaagttgaga
     1801 cgacgctcgg aggtgtcggg atcgccgaat tgcgctacga gagggttggc ggcggtctcc
     1861 aggatggacg atccgctgcc gacgatgaag agcgctatca ggaacggcgt gtagcggccg
     1921 atgacagcgg ccggccagaa caacagcgtc ccaacgccaa aggtgaccag cccgagaacc
     1981 aggccggctt tgtagccgaa cctgcgcatg agcaaggcgg ccggcgtcgc catgacgaaa
     2041 taggcgagga agaccgcggt ttgcacgagc tgggcctgca gcaggttcag ctcaaaggat
     2101 tttctgaact gctgcacgag aatgtcggtt agattgttcg acatccccca tacgaaaaag
     2161 atcatcgttg tgagcaggaa tgcgagcatg tgcccgtgcg ggaagagcga tgcgtggctt
     2221 cgatcgtggg gggatgtcac aggctcttgc acacgctgga tgctatccca tgacgtcata
     2281 cggccgcatc atgtcattgg cttcatgctc gaggatgtgg cagtgccaga gataacgtcc
     2341 ggcatagggc gagaacggaa cgataatgcg cgtcaccgtc tcgggcggac actgcaccac
     2401 atccttccag cccatctcgt gcggagcggg cggccgtaga gggccggtga agcgcatggt
     2461 ctcatcg
//
LOCUS       DATAVD010000791         2301 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2306172, whole genome shotgun sequence.
ACCESSION   DATAVD010000791 DATAVD010000000
VERSION     DATAVD010000791.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2301
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2306172"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..786)
                     /locus_tag="VHX39_15145"
     CDS             complement(<1..786)
                     /locus_tag="VHX39_15145"
                     /inference="COORDINATES: protein motif:HMM:NF012739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX3992504.1"
                     /translation="MANGETTKDAAKSDASEAKSSEKPEGDEQQGEEPKENLFTRFRK
                     AIFAHKLLSAAGALVVVLVIAGGIAWWLNARQYESTDDATVDAAIVHIGATVTGRIAE
                     LDATADQHVAANAVLMKLQPAETTGAALPPSSTPEAGAGPGRPAQSAAPIELRTPVAG
                     SVAHLVTSAGSTVVPGQQLLQIVPDQFWITAQFKETQLADMRVGQHADITLDAYPGQT
                     FAGHVASFEAGAGQAFSLLPPDNANGNFVKTVQRVAVRINFDQP"
     gene            948..1571
                     /locus_tag="VHX39_15150"
     CDS             948..1571
                     /locus_tag="VHX39_15150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX3992505.1"
                     /translation="MSARPGETSIHGGLNRRNFIAISASSVALPAGAAPLTGQAQSSP
                     PVEVRTPVPVHLKINGQPYDLAVDVRTTLLDLLRDHAQLTGSKKGCDHGQCGACTVHL
                     DGKRVLSCLSFAVMNEGREVTTIEGLARPDGTLHPMQQAFMEHDGFQCGYCTPGQIMS
                     AIACIHEGHAETDEDIREYMSGNICRCAAYPNIVDAIRQAKTVMEQS"
     gene            1574..>2301
                     /locus_tag="VHX39_15155"
     CDS             1574..>2301
                     /locus_tag="VHX39_15155"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEX3992506.1"
                     /translation="MRPFAYYRPETLDAALMLFGGEAEPPPSAATQVIAGGTNMLDYM
                     KLGVMQPAHLVDINQLQDADLRTIEASATGLRLGALVRMGEAEDHPAIRRDYPLMAEA
                     LQLAASPQIRNMATLGGNILQRTRCEYFRETSWACNKRNPGSGCDAMDGFNRQHAVLG
                     TSDKCIATYHGDFAQALIALDAAVDITGSSGNRTIPIAQLHRPPGDTPNIETVLRPGD
                     IITAINVPPGPWTRRSHYLKVRDR"
BASE COUNT          425 a          747 c          715 g          414 t
ORIGIN      
        1 aggctgatcg aagttgatgc ggaccgcgac ccgctggacg gtcttgacga aattgccatt
       61 ggcattatcc ggcggcagca gggaaaaggc ttgccccgct cctgcctcga agctggccac
      121 atggccggca aaggtctgcc ccggataagc atcgagagta atatcggcgt gctgtcccac
      181 acgcatgtcg gcgagctggg tctccttgaa ctgcgcggtg atccagaatt ggtcggggac
      241 gatctgcagc agttgctgtc ccggcacgac cgtactgccc gcggaggtca ccaagtgggc
      301 aaccgagccg gcaaccgggg tacgaagctc gatcggcgcg gcggattggg caggtctacc
      361 gggaccggca ccggcttcgg gggtcgacga tggtggcagc gccgctcctg ttgtttcggc
      421 cggctgcagc ttcatcaaca cggcgttggc ggcaacgtgc tgatcggcgg tggcatcgag
      481 ttcggcgatg cgtccggtca ccgtcgcgcc gatgtgcaca attgccgcgt cgaccgtggc
      541 gtcatcggtc gactcatatt ggcgggcgtt gagccaccag gcgataccgc ccgcaatgac
      601 gaggacgacg accaacgcgc cggcagcgct gagcagtttg tgggcgaaaa tggctttgcg
      661 gaaacgggtg aagagattct cttttggctc ctcgccctgc tgctcatcgc cttcaggctt
      721 ttcgctggac ttggcttccg acgcgtcgct cttggctgcg tccttggtcg tctcgccatt
      781 ggccatatgc cggatttccg ctgcgcctga ggaaattgga attccgcgcg ctcggctttg
      841 ttccgagcct gacgacgaaa tggcagctgc tgatcatccg acgtgcgcct ggatggacgg
      901 aacggctcgg aacaggcaac gttcagctct caccaggagg aacgtccatg tcggctaggc
      961 caggtgaaac cagtatccat ggcggcttga accgccggaa tttcatcgcc atctccgcga
     1021 gctcggttgc gcttcccgct ggcgccgcgc ccttgaccgg acaggcccag tcgtcgcctc
     1081 ccgttgaggt ccgcacgccc gttccggtgc atctcaagat caacggccag ccttacgatc
     1141 tcgccgtcga cgttcgcaca accttgctcg acctcctgcg cgatcacgcg cagctgaccg
     1201 gtagcaagaa ggggtgcgac cacggccagt gcggcgcctg cacggtacac ctcgacggca
     1261 agcgggtgct ctcctgcctc agctttgccg taatgaacga ggggcgcgag gtcactacca
     1321 tcgaaggact cgcccgcccc gacggcacgc tccacccgat gcagcaggct ttcatggagc
     1381 atgatggctt ccagtgcggc tattgcacgc cagggcagat catgtccgcc atcgcgtgca
     1441 tccatgaagg gcatgcggag acggacgagg acatccggga atatatgagc gggaacatct
     1501 gccgctgcgc ggcctatcca aacattgtcg atgccatccg gcaggcgaag acggtgatgg
     1561 agcaaagctg accatgcgcc cgtttgccta ctaccggcct gagactctgg atgccgccct
     1621 aatgctattt ggtggcgagg ccgagccacc gccgagtgcc gcgacgcagg tcatcgccgg
     1681 cggcaccaac atgctcgatt acatgaagct cggcgtcatg cagccggcgc atctggtcga
     1741 catcaatcaa ctgcaagacg cagatcttcg gacgattgag gcgagcgcca cgggcctgcg
     1801 gctgggggcg ctggtccgta tgggcgaagc cgaggatcat cccgcgatcc gtcgcgacta
     1861 cccgctgatg gctgaggcac tgcagctcgc cgccagtccg cagatccgca acatggccac
     1921 cctgggcggc aacatcctgc agcgcacccg ttgcgaatat tttcgcgaga cctcgtgggc
     1981 ctgcaacaag cgcaacccag gttccggctg cgacgcgatg gacggcttca accgccagca
     2041 cgctgtgctt ggcaccagcg acaaatgcat tgccacctat cacggcgatt ttgcgcaggc
     2101 gctgattgcg ctcgatgccg cggtcgatat caccgggtcc agcggaaaca gaaccattcc
     2161 gatcgctcaa ctgcatcgcc cgcccggcga cacgccgaac atcgaaacag tcctgcggcc
     2221 cggcgacatc atcaccgcca tcaacgtccc gccgggaccc tggacccggc gctcccatta
     2281 cctgaaggtc cgcgaccggc a
//
LOCUS       DATAVD010000792         3676 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2121560, whole genome shotgun sequence.
ACCESSION   DATAVD010000792 DATAVD010000000
VERSION     DATAVD010000792.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3676
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2121560"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1815)
                     /gene="nifJ"
                     /locus_tag="VHX39_15160"
     CDS             complement(<1..1815)
                     /gene="nifJ"
                     /locus_tag="VHX39_15160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008854642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HEX3992507.1"
                     /translation="MSQRKTMDGNTAVAHVAYRLNEVCAIFPITPSSTMAELADEWVA
                     DGVKNIWGNVPVVQQMQSEGGAAGAVHGALQSGALTTTFTASQGLMLMLPNMFKIAGE
                     LNATVFHVAARSLATSALSIFGDHADVMTARPTGFAILCSASVQEAHDCALLAQMATL
                     ESRVPFLHFFDGFRTSHELNTLELLSDGDLRAMIDDDLVRAHRARGLNPEHPFIRGTA
                     QNPDTFFQAREAVNPYHARVPAIVEGAMQRFTALTGRQYGLFEYSGDPDAERVLVLMG
                     SGVETARAAAAALQNAGEKVGVLQVRLFRPFSVAHLLAALPATVRRIAVLDRTKEPGG
                     TGEPLFQDIVTALAGAVARGDRATMPHVIGGRYGLSSKEFTPAMAKAAFDELKAPQPR
                     TDFTVGINDDVSHTSLAIDAGFMVEKANVTRAVFYGLGADGTVGANKNSVKIIAEDAG
                     LYAQGYFVYDSHKSGAQTISHLRFGPEPIHAPYLISQAGFVACHQFMAVQRQDLLDVA
                     APGATVLLNVPWPAEEVWDQLPRPVQETIVSRKLRLFVIDASAVAREVGLGSRTNTVL
                     QTCFFAISGVLPHDKAIGHIKDAIRRTYEQKGQTVIDRN"
     gene            complement(1812..3455)
                     /locus_tag="VHX39_15165"
     CDS             complement(1812..3455)
                     /locus_tag="VHX39_15165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008854641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HEX3992508.1"
                     /translation="MNDHHQDMSPLVDLTRRRATGPSRTTQPVYVDLLPPCNNACPAG
                     EDIQAWLALAQAGKYREAWQALVRDNPMPAIHGRVCYHPCESACNRAELDASVSIHAV
                     ERFLGDLATAENWPFKAGAQGSGKRVLVIGAGPCGLSAAYHLARLGHTVEIHDAEPAA
                     GGMMHFGIPAYRLPRADLIREIRRIEAMGVTIVLNHKVTDVQAEIAEGRFDAAFVAIG
                     ADIGKHVDIPARDAVRVLDAVSLLHDVQTGAAPLLGRKVIVYGGGNTAMDAARTVRRL
                     GADEALIVYRRDRAHMPAHGFEADEVLEEGIKIKWLTTIKEIVGPRLTVEIMELDAGG
                     RPQPTGRFETLPADAVVLALGQSTESGFLRTVPGLTFGSDGTVVVGKNLMTGHPGLFA
                     GGDAIDGEKSVTIAVGHGKRAARNIDAWLRETNYVASPKAPLVSFPMLRLPVYSDADP
                     HAQRTLEAAGRITGFEEVVQGLDATAARHEAQRCLSCGNCFECDNCFAACPETAIVRL
                     GPTRGYQINLDLCTGCAVCVEQCPCHAMEMVPERGAFAR"
BASE COUNT          700 a         1196 c         1085 g          695 t
ORIGIN      
        1 attccgatcg atgacggtct gacccttttg ttcataagtt ctccggatgg cgtccttgat
       61 gtgaccgatc gccttgtcgt gcggcagcac gccggagatc gcgaagaagc aggtctgcag
      121 caccgtattg gtccgtgacc cgagcccgac ctcacgcgcg actgcggagg cgtcgatgac
      181 gaacaggcgc agcttgcggc tgacaattgt ttcctgcacg ggcctcggca gttgatccca
      241 gacctcttcc gccggccagg gaacattcag cagcacggtt gctcccggcg cggccacatc
      301 cagcagatct tgccgttgca ccgccatgaa ctgatgacat gcgacgaagc cagcctggct
      361 gatcagatac ggcgcatgga tcggctccgg cccgaagcgg agatgcgaaa tcgtttgcgc
      421 cccggattta tgcgagtcgt aaacaaaata cccctgcgca tacaagccgg cgtcttccgc
      481 aatgatcttg acgctgttct tgttggctcc aaccgtgccg tcggcgccaa gtccgtagaa
      541 cacggctctg gttacgttcg ccttctcgac catgaatcca gcgtctatgg cgaggctcgt
      601 gtggctgaca tcatcgttga tcccgacagt gaagtcagtc cttggttgtg gcgccttcaa
      661 ctcgtcgaat gctgccttcg ccatcgccgg agtgaattcc ttcgacgaaa ggccgtaccg
      721 tccgccgatc acatgcggca tcgtggcccg atcgccacgg gccacggctc cggcgagggc
      781 ggtcacaata tcctggaaca gcggctcacc ggtgccgccc ggttccttcg tgcggtcgag
      841 caccgcaatc cgccgcacgg ttgccggcag cgccgccagc aaatgcgcga ccgagaacgg
      901 ccgaaacaac cggacctgca gcacgccgac tttctcgccg gcattctgca acgccgccgc
      961 tgccgcgcgt gccgtttcaa caccggagcc cattagcacc aagacccgct cagcgtccgg
     1021 gtctccgctg tattcgaaca aaccatactg cctgccggtc aacgcggtga agcgctgcat
     1081 cgcaccttca acgatggccg gcacgcgagc gtgatacgga ttgaccgcct cacgcgcctg
     1141 aaaaaatgta tccggattct gagcggtgcc acgaatgaat ggatgctcgg gattcaggcc
     1201 ccgggcacga tgcgcgcgca ccagatcgtc atcgatcatg gcacggagat cgccatcgct
     1261 cagcagttcc aacgtgttca attcgtgcga tgtgcgaaag ccatcaaaaa agtgcaggaa
     1321 cggcacccgg ctttccagcg tggccatttg cgccagcaga gcgcagtcgt gcgcctcctg
     1381 caccgaggca gaacacaaaa ttgcgaatcc ggtcggcctt gctgtcatga catcggcgtg
     1441 atcgccaaaa atcgacagtg ccgaggtcgc cagcgagcgt gccgcgacat ggaacaccgt
     1501 cgcatttaac tctccggcga tcttgaacat gttcggcagc atcagcatca gaccctgcga
     1561 cgcggtgaac gtcgtggtca gtgcaccgga ttgcagcgca ccgtgcacag caccggcggc
     1621 gccgccttca gactgcatct gctgcacgac cggcacgttg ccccagatgt tctttacccc
     1681 atcggccacc cattcatcgg cgagctcggc catggtcgac gacggagtga tcggaaaaat
     1741 cgcgcacacc tcattaagcc ggtacgcgac atgtgcaacg gcggtgttgc cgtccatggt
     1801 ctttcgctga ctcatcgtgc gaaggctcca cgttcgggca ccatttccat ggcgtgacag
     1861 ggacattgtt caacgcaaac ggcgcagccg gtgcacaaat ccaggttgat ctggtagcca
     1921 cgcgttggcc cgagacgaac aatcgccgtc tccgggcagg cagcgaagca attgtcgcac
     1981 tcgaagcaat tgccacagga caaacatcgt tgcgcctcgt gacgcgctgc ggtggcatcg
     2041 aggccttgca cgacctcctc gaaaccggtg attcggccgg cggcctccag cgtccgttgc
     2101 gcgtgcggat cggcatcgct gtaaaccggc aaacgcaaca tcgggaaact caccagcggg
     2161 gctttcggcg aggcaacata gttggtctcg cgcagccacg catcgatgtt ccgtgccgct
     2221 cgcttgccat gcccgactgc gatggtaacc gacttttctc cgtcgatcgc atccccgccg
     2281 gcgaacaaac ccgggtgacc ggtcatcagg ttcttgccga ccacaactgt gccgtcggag
     2341 ccaaatgtca ggccgggcac agttcgaagg aaaccgcttt cagtcgattg accaagcgcc
     2401 aacaccacgg cgtcggccgg caacgtctcg aaccgtccgg tcggctgcgg ccgtccgccg
     2461 gcatcgagtt ccatgatctc gacagtcagc cgcggtccca caatctcttt gattgtcgtc
     2521 agccatttga ttttgatgcc ttcttcgagg acctcatcgg cctcgaagcc atgcgccggc
     2581 atgtgggcgc ggtcgcgccg gtaaacgatc agtgcttcat ccgcacccag acggcgcacc
     2641 gtccgcgccg catccatcgc cgtattgccg ccgccataaa cgatgacctt gcggccgagc
     2701 aaaggcgctg cgccggtttg cacgtcatgc agcagcgaca cggcatcgag tacgcgcacg
     2761 gcatcccgcg ccggaatgtc aacgtgtttg ccaatatccg cgccgatcgc cacgaatgcg
     2821 gcgtcgaacc tgccctcggc gatttccgcc tgcacgtcgg taaccttatg gttgaggacg
     2881 atggtcacgc ccatcgcctc aatccgccgg atttcgcgta tgaggtcggc ccgtggcagc
     2941 cggtaggcgg ggatgccaaa atgcatcatg ccacccgcgg cgggttcggc gtcatggatt
     3001 tcgacggtgt ggccaaggcg cgcaaggtga taggcggcag acagcccgca gggtcctgcc
     3061 ccgatcacca gaacgcgctt gccgctgccc tgagccccgg ccttgaacgg ccagttctcc
     3121 gctgtcgcga ggtcgcccag aaaccgttcg accgcatgga tactgacgga agcgtcgagt
     3181 tcggcccgat tgcaggcgct ttcacacgga tgatagcaaa ctctgccgtg aatcgccggc
     3241 atcgggttgt cgcgcaccag cgcttgccat gcctcgcgat attttcctgc ctgcgccagt
     3301 gccagccacg cctggatgtc ctcgcccgcc gggcacgcgt tgttacaggg cggcagcagg
     3361 tcgacataga ccggctgggt cgtccgggaa ggtccggtgg cgcggcggcg ggtcagatcg
     3421 accagagggc tcatgtcctg atggtggtcg ttcatgatgc ctcggtgggt ggtgaaaagg
     3481 cgtcgccgac cgccggcttt cacctccggt cgcctcgaag aagcagatgt ttctcgccag
     3541 cccgaccggg tatccgtacc gaaacattgt cggtgtcagt tgcgcctgga ggacggtaag
     3601 tttgcgcttt cctcatgggc tggcagccgc agccacgcat tgacctgggt caacctgctg
     3661 atcaccaatg tatgca
//
LOCUS       DATAVD010000793         4104 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2867121, whole genome shotgun sequence.
ACCESSION   DATAVD010000793 DATAVD010000000
VERSION     DATAVD010000793.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4104
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2867121"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..430)
                     /locus_tag="VHX39_15170"
     CDS             complement(<1..430)
                     /locus_tag="VHX39_15170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX3992509.1"
                     /translation="MVALERGPWRNTASDFPPSYAPDELRYRIRHDLFLRSAQATLTF
                     RNNGQQTALPVRHWGAFMLGNGAGGAGVQWNAETWRFLPSDFVLKSHLTQRYGAPFLP
                     ADMTIQDWGITYQDLEPYYDKFEYLCGTSGTAGNLKGQIQP"
     gene            complement(529..1254)
                     /locus_tag="VHX39_15175"
     CDS             complement(529..1254)
                     /locus_tag="VHX39_15175"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HEX3992510.1"
                     /translation="MADQRRRELLALTAAAVVAVPAARAALVKGGPPWTPTDAAPPPQ
                     EGGPGWRYFTDGEGAIVEAMVDRFIPPDPETPGGKDCGCAVFIDRQLAGSYGRADDIY
                     AGGPFQHGTKEQGDQSSLTPAAQYRVGLAALDQYCKAQFSGAGFSRLAGDKQDTVLKG
                     LEDGSVMLRGVDSKTFFHDMLIDTQQGFFADPVYGGNRDMASWKMIGFPGARYDYRDW
                     VHRHNERYPLPPISIREHPNWKG"
     gene            1665..1868
                     /locus_tag="VHX39_15180"
                     /pseudo
     CDS             1665..1868
                     /locus_tag="VHX39_15180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612038.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
     gene            2022..2282
                     /locus_tag="VHX39_15185"
     CDS             2022..2282
                     /locus_tag="VHX39_15185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051983 - regulation of chromosome
                     segregation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HEX3992511.1"
                     /translation="MGTNVSLTLELEQFAQRCVLSGRFNNVSEVVRKGLRLLQEQEEA
                     RVAFLRSLEEAAEEGEREGFFTAEEVGRDARAAIRAVRDRRK"
     gene            2279..2584
                     /locus_tag="VHX39_15190"
     CDS             2279..2584
                     /locus_tag="VHX39_15190"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEX3992512.1"
                     /translation="MSKPLFAPRARRELVAAAAAIAKDNPLVAEMFVSVVEESAARVC
                     ARPTLARVEPKLASDRFRFWSVRGFPYLLVVDTASDQPRIVRIVHQARDLPTALRDL"
     gene            complement(2926..3468)
                     /locus_tag="VHX39_15195"
     CDS             complement(2926..3468)
                     /locus_tag="VHX39_15195"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3992513.1"
                     /translation="MAEDDTGICDLLTDVLEAEFAAIVRCERTGSRAWLAIETAGFDL
                     AIIDANMPEVSGFELARLAANRQIPTLLSSGHSDADAKLRGAKCPYLAKPYRIADLTS
                     EAAYAITHAAENIRRVKASLARLTAATEGLQAEIAESRRLIDESNAILAGFQPPDASA
                     PLDAVSDWLGRLGSAPKRHR"
     gene            complement(3489..3764)
                     /locus_tag="VHX39_15200"
     CDS             complement(3489..3764)
                     /locus_tag="VHX39_15200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992514.1"
                     /translation="MPAKAARLKNAPDGPRQEFERRNDGRLPGNWKQAVAAARQEFRD
                     GKALATRQASGAVLNHLFMPFLSCLAVRPTHRLAVWPEGSTFIWSIR"
BASE COUNT          740 a         1311 c         1265 g          788 t
ORIGIN      
        1 caggctggat ctgccctttc aggttgcccg cagtgcccga cgtgccgcac agatactcga
       61 atttgtcgta gtatggttcc agatcctgat aggtaatgcc ccagtcctgg atcgtcatgt
      121 cggccggcag gaagggcgca ccgtagcgtt gcgtcaggtg cgacttgaga acaaaatcgg
      181 agggaaggaa gcgccaggtc tcggcgttcc actgtacgcc tgcgccgccg gcgccgttgc
      241 ccagcatgaa cgccccccag tgccggacgg gcagggcggt ctgctgtcca ttgttgcgga
      301 aggtcagcgt cgcctgcgcc gagcgcagga acaggtcgtg ccggatgcga tagcgcaact
      361 catccggcgc ataggacggc ggaaagtctg aggcggtgtt ccgccacggc ccgcgttcca
      421 gtgcgaccac gtccagcccc gcatccgtca gttcgtaagc gagaatacac cccgtccagc
      481 caagcccaac gatgacgaca tccttcctcg gcagcttgcg cggctgcctc agcctttcca
      541 gttcgggtgc tcgcggatgc tgatcggcgg caatggatag cgttcgttgt ggcggtggac
      601 ccagtcgcga tagtcgtaac gcgcgcccgg gaagccgatc attttccacg aggccatatc
      661 gcggttgccg ccatagacag gatcggcgaa aaacccttgc tgggtgtcga tcagcatgtc
      721 gtgaaagaag gtcttggagt cgacaccccg cagcatcacc gacccgtcct caagcccctt
      781 cagcactgta tcctgcttgt cgcccgccaa ccgggagaaa ccggcgccgc tgaattgcgc
      841 tttgcaatac tggtccaagg ccgccaatcc aacgcgatac tgcgccgccg gcgtcagcga
      901 agattggtcg ccctgttcct ttgtcccatg ctggaacggt ccgcccgcgt aaatatcatc
      961 cgcccggcca tacgatccgg ccagttgccg atcgatgaaa acagcacaac cgcaatcctt
     1021 gccgccaggg gtttccggat cgggcgggat aaaccggtcg accatcgcct ccacgatcgc
     1081 gccctcgcca tcggtaaaat accgccagcc gggccctccc tcctgcggcg gaggggcagc
     1141 atcggtcggc gtccagggcg gtccaccctt gaccaaggcg gctcgggcag cgggcacggc
     1201 aacaacggcc gcggcggtca acgcgagcag ttctcgacgt ctctggtctg ccacccgcgc
     1261 ctctccatct gatctcggtg gaaacgaaac aggagcggcg tcgtttcccg ttgccgcaaa
     1321 cgtgatcgcc gacaattccc ggaggctcga tcgcccgcga gcgacggaat cccggatcca
     1381 tcacgtgcca acgaagtccg tattcaccgc cgcacgtcgc ttctccaggc cccgttccct
     1441 ggaagccgcc agccggcgct cactggccgc aaacaatcgc cgccctcgtt cgtccagaac
     1501 cggctcaagc gcctcgaagc gagccctgat ggcagcaatg tcaatcaccc catcggggta
     1561 agcgctccag caaccgaagc acaccaattc cccggttcgt tcgttgcgtt cttatctacc
     1621 tcccgattct ttccttccga ttcgcttgtc ctcgctcagg cgctcagatc aaatacctca
     1681 acaacatcgc cgaacaggat catcgagcca tcaaacgagt ggtgcggccg atgttggggt
     1741 tcaagtcctt ccgatcagtc gcggtgacgg ttgtcggtat cgagctcatg cgcatgattc
     1801 ggaaaggcca gtcgcagacg acagccgagg tgcgtccggc tcggcaattc tattcgttgg
     1861 caggataaag cccgaggatc cttggcgcac gcctgtcatc ccttggaaat ctgcgacaga
     1921 accgattgct ctgcgggccc ggttggtcgg tgatacggac ggcggccact tgaagcaggt
     1981 cccaaagcat catatcaatc tttgatattg aggagccacc gatgggcacg aacgtcagcc
     2041 tgaccctgga gcttgagcag tttgcccaac gctgcgtcct gagtggtcgg ttcaataacg
     2101 tcagcgaggt ggtgcgaaag ggcctgcgcc ttctgcagga acaggaggag gcgcgcgtgg
     2161 cgtttctccg ctcgctggaa gaggccgcgg aagagggcga gcgcgagggc tttttcacag
     2221 cggaggaggt tgggcgtgat gccagggccg ctatccgggc cgtgcgcgat cgccggaagt
     2281 gagcaaaccc ctgtttgcgc cccgagcgcg gcgggaactg gtcgccgctg ctgctgccat
     2341 cgcgaaggac aaccccctgg tcgcggagat gttcgtgtcg gtcgtggagg agagtgccgc
     2401 acgcgtttgc gcgcgaccta ccctcgccag ggttgagcca aaacttgcca gcgatcgctt
     2461 ccggttctgg tccgtccgcg ggtttcccta tctgctggtc gtcgataccg ccagcgatca
     2521 gccgaggatc gtccgcattg tccatcaggc gcgggatctg ccgacggcac tgagggatct
     2581 ctgagtgcag ccgtccgttt ttcattgcgg gcaacccgcg ccggtcctcc atcggcgggg
     2641 attgtcctgc aggcccggct ggtcggtgat gcggatcaca taacgtcggc gtctatggcg
     2701 tcaagcggcc ggacgagatc caacgacgct gggcctatta cgatcgactg gcgactgtga
     2761 acggtgccgc cgcctttccc ccggcggcgt gcagggcgca accaggccag gcggcgcggg
     2821 gcgaatcgcg ttagcggggt ggcgtggcaa ctgccgcttc cgccggcgct gtggtgccca
     2881 tcccccgtgt ccaaaccagg atgtgtgagt ggcccgcgat atccgtcaac ggtggcgttt
     2941 cggtgcggat cccaaacgtc caagccagtc gcttacggca tccagcggag ccgaagcgtc
     3001 cggcggctgg aaaccggcga ggatggcgtt gctctcgtct atcagccggc gggactctgc
     3061 gatttccgct tgcaagcctt cagtcgcggc ggtcagcctg gcgagggaag ctttgacgcg
     3121 gcggatgttt tcagccgcgt gggtgatggc atacgcagcc tcggaggtca ggtcggcaat
     3181 ccggtacggc ttggccaggt agggacattt tgcccctcgg agtttggcat cggcgtcgga
     3241 atggccgctg gaaagcagcg tgggtatttg ccgattggct gcgagccttg ccagctcaaa
     3301 gccggacacc tcaggcatgt tcgcgtctat gattgcaaga tcaaagcccg cggtttctat
     3361 ggccagccag gcccggcttc ccgttcgttc gcatcttact atcgcggcga actcagcctc
     3421 gagaacgtcg gtcaggaggt cgcaaatgcc cgtatcgtct tcggccacca aaaccgctgt
     3481 cataaccatc accggattga ccagatgaag gtagacccct ccggccaaac cgccaagcgg
     3541 tgggtcggcc gaaccgccaa gcaactcaga aatggcatga acaggtgatt gaggaccgcc
     3601 ccgctcgcct ggcgcgtggc cagtgccttg ccgtccctga attcctgccg agccgccgcg
     3661 accgcctgct tccagttccc cggcaacctg ccgtcgttgc ggcgctcgaa ctcctgccgc
     3721 ggtccatccg gcgcattctt cagccgggct gctttggccg gcaagccata tcgcctcgtg
     3781 gctgatgcct tccatgagac gaagccaacc cggccgctgc cccaagccaa acagataagg
     3841 gataagcttg ctcgctattc cggaaatgac ctacgtcgtg cgtaacccac ttgagcccgt
     3901 gagcaggcga tgtcgggctt ttgtaggcca ctccattttc gtatcggaac ctgacccttg
     3961 taacacgctt ttagcgtaac cattcggcgt gggccgcagg ctgcctattt ccgggcgcag
     4021 cggcgctcca ggagcgttgg gtcttgcttg tgcatttcga tgaggtcggt gagggtctcg
     4081 attccgaagt ccgtgaatgc catg
//
LOCUS       DATAVD010000794         2777 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1376692, whole genome shotgun sequence.
ACCESSION   DATAVD010000794 DATAVD010000000
VERSION     DATAVD010000794.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2777
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1376692"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..389
                     /locus_tag="VHX39_15205"
     CDS             <1..389
                     /locus_tag="VHX39_15205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HEX3992515.1"
                     /translation="DGLITPIIRHADHKGLATISREMKDLAGRARAGKLKPEEFQGGG
                     FSISNMGMFGVSAFTAIINPPQSAILAVAAGQKRPVVNAAGELAVATVMTCTLSVDHR
                     VADGVLGAIWMRTFKQVVEDPLSLLL"
     gene            400..906
                     /locus_tag="VHX39_15210"
     CDS             400..906
                     /locus_tag="VHX39_15210"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3992516.1"
                     /translation="MAKASPAPAIRLARPADVPAVLRLIRGLAEYERMLPEVTATEGQ
                     IHEALFVSPPRAYALIAEIGGTAIGLAFYYYTLNTFKLRPNIFLEDLFVDPAHRGTGA
                     GYALMRDLARRAVAENCGRIEWRVLNWNQPSIDFYHRIGSRPISDWHTLQLGGGALAA
                     LAEGNPHG"
     gene            899..2299
                     /gene="lpdA"
                     /locus_tag="VHX39_15215"
     CDS             899..2299
                     /gene="lpdA"
                     /locus_tag="VHX39_15215"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013641053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEX3992517.1"
                     /translation="MADQAFDLIVLGTGPGGYVAAIRAAQLGMKTAVVERENLGGICL
                     NWGCIPTKALLRTSEINHLLHHLPDFGFEAVKPVFDIGKVVKRSRAVAKQLSSGVAFL
                     LKKNKVTVFDGDGKLNGKQTVSITKDGKDVATLKAPHIILATGARARQLPGIEADGKL
                     IWSYREAMVPPMFPKSLLVIGSGAIGIEFASFYLNMGAQVTVVEVLPRILAVEDEEIS
                     AFAHKAFEKQGMKILVNATVKGARKGSDNVTVTVETGGKSQDITVDRVISAVGIVGNT
                     ENIGLEGTAVKVDRTHVVIDEYGRTGEPGIYAIGDLAGPPWLAHKASHEGVICVEKIA
                     GLKDVHPMDVRNIPGCTYCRPQVASVGLTEAKAKELGHDVKVGHFPFIGNGKAIAMGE
                     PDGMVKTVFDAKTGELLGAHMVGAEVTEMIQGYTIARTLETTETELIETIFPHPTVSE
                     TMHEAVLDAYKRAIHF"
     gene            2490..2618
                     /locus_tag="VHX39_15220"
     CDS             2490..2618
                     /locus_tag="VHX39_15220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992518.1"
                     /translation="MPLFSLAKGMDADLPRHDALITEETVSSEIRAWMPTCVGMTD"
BASE COUNT          521 a          818 c          890 g          548 t
ORIGIN      
        1 cggacggttt gattaccccg atcatccgcc acgccgacca taagggcctg gcaacgatca
       61 gccgcgagat gaaggacctt gccgggcggg cacgcgccgg caaactgaag cccgaggagt
      121 tccagggtgg tggcttctcc atctccaaca tggggatgtt cggtgtgtcg gcgttcaccg
      181 cgatcatcaa cccgccgcag tccgccatcc tggctgtcgc ggcggggcag aagcggccgg
      241 tggtcaatgc agctggcgaa ttggcggtcg ccacggtgat gacctgcacc ttgtcggtgg
      301 accaccgcgt cgccgacggg gttttgggcg cgatctggat gcggactttc aagcaggtgg
      361 tcgaggaccc gttgagcttg ctgctgtagg gggccgtccg tggcaaaagc gtcgccggcg
      421 cccgctatac gccttgcccg ccccgccgat gtcccggccg ttctgcgcct gatccgtggc
      481 ttggcggaat acgaacgcat gctgcccgag gttaccgcca ccgaaggcca gatccacgaa
      541 gcgctgttcg tttcgccgcc ccgcgcctac gcgcttattg ccgagattgg tgggaccgca
      601 atcggcctcg cattttacta ctatacgctc aataccttca aactgcgtcc gaacattttc
      661 cttgaagacc tgttcgtcga tccggcccat cgaggtaccg gcgcgggcta cgccctgatg
      721 cgcgatctgg ctcggcgcgc cgtcgccgag aactgcgggc gtatcgagtg gcgggtgctg
      781 aactggaacc agccgtccat cgacttctac catcggatcg gttccagacc gatcagcgat
      841 tggcacacac tgcaactggg cggcggcgcg cttgccgccc tggcggaagg aaacccacat
      901 ggctgaccaa gcattcgatc tgatcgtcct gggcacgggt ccgggaggct atgtcgccgc
      961 catccgcgcc gcccagcttg ggatgaagac cgctgttgtg gagcgggaaa accttggcgg
     1021 tatctgcctc aactggggct gcatcccgac caaggcgctg ctgcggacga gtgagatcaa
     1081 ccacctgctg caccatctgc ccgatttcgg cttcgaggcg gtcaagccgg ttttcgacat
     1141 cggcaaggtg gtcaagcggt cacgtgctgt cgccaagcag ttgtccagcg gtgttgcttt
     1201 cctgctgaag aagaacaagg tcaccgtgtt cgacggtgat ggcaagctga acggcaagca
     1261 gactgtttcc ataacgaaag atggcaagga cgttgccacc ttgaaggcac cgcacatcat
     1321 tttggccacg ggcgcccgag cgcggcagct tccggggatc gaggcggatg gaaagctgat
     1381 ctggtcgtat cgggaggcga tggtgccgcc gatgttcccg aaatcgttgc tggtcatcgg
     1441 gtccggcgcc atcggtatcg agtttgccag cttctacctc aacatgggcg cgcaagtgac
     1501 ggtggtggag gtcctgcctc gcattcttgc tgtcgaggac gaggagattt ctgcctttgc
     1561 ccacaaggcg tttgagaaac aggggatgaa gatcctggtc aacgccactg tgaaaggcgc
     1621 caggaaggga tcggataacg ttacagttac agttgaaacg ggcgggaaat cccaggacat
     1681 cacggtcgat cgggtgatct cggccgtcgg tattgtcggc aacaccgaga acatcggcct
     1741 ggaaggcacc gccgtgaagg tggatcgcac ccatgtcgta attgacgagt acgggcggac
     1801 gggcgagccc ggtatctatg ccatcggcga tcttgccggc cctccctggc tcgcgcacaa
     1861 ggccagccat gagggtgtca tctgcgtgga gaagattgcc ggtctgaagg atgtgcatcc
     1921 gatggacgtg cggaacatcc cgggctgcac ctattgccgg ccgcaggtcg cctcggtcgg
     1981 gctgacggag gcgaaggcca aggagctggg gcatgatgtc aaggttgggc acttcccgtt
     2041 catcggcaac ggcaaggcca tcgccatggg tgaacccgac ggcatggtca aaaccgtgtt
     2101 cgatgccaag accggcgaac tgctgggtgc ccacatggtc ggcgccgagg ttaccgagat
     2161 gatccagggc tacaccatcg cccggaccct ggagacgacg gaaaccgagc tgatcgagac
     2221 cattttcccg catccgacgg tcagcgaaac gatgcatgag gcggtgctgg acgcgtataa
     2281 gcgggcgatc catttctgac tggagccaac cccgctttcc cgtcctggtc cagatgcgcg
     2341 gagtccgatc gccgattctc tatccttgcc cccgggcatc cgcatgtcat tggtcgcgta
     2401 gatacggatg ttggtattga gcctataatg ccagtcggcg ttgttgttga tccatcgggg
     2461 ccgcagttcg cccgtcgtgg tgggcttccg tgcctttgtt ttcgctggct aaaggcatgg
     2521 atgccgacct gcctcggcat gacgcattga tcaccgaaga gacggtatca agcgagatca
     2581 gggcatggat gccgacctgc gtcggcatga cggattgatt gaccgaagag acggtgtcga
     2641 tggcggttgg tatgaatcag cctcgcaatg accgacgttg caccatcgcc ggctgttcgc
     2701 gctcgatcat gaaatcatcg cttacatagg gcccatccgg gaacgggtcg ccccattttc
     2761 tgcctggcgg catgccc
//
LOCUS       DATAVD010000795         2194 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3237862, whole genome shotgun sequence.
ACCESSION   DATAVD010000795 DATAVD010000000
VERSION     DATAVD010000795.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3237862"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..788
                     /locus_tag="VHX39_15225"
     CDS             <1..788
                     /locus_tag="VHX39_15225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992519.1"
                     /translation="TYRMIFWLESQPVSVIVVIGYALCFSMAAATFIVGWLLSRTRFA
                     DDLGFVTPTLLTPLGVILGLLLVFLSSRVWTNVDRAGAASGREATAVQELRRTADEMP
                     SAVADPIRDGARTYLEWVRQEDWPRMMSGKGSLNSRLPGLADATMALADYNATISGQR
                     AVQEEALAAIEKVRDARRARILQSRSFIGRGQWMVVLALYLHVLLSIATIHVKRRMSM
                     AIALSMFSSAFAICFVLLLVYDNPFRSGGLTVGPVDIETPLAE"
     gene            complement(820..1656)
                     /locus_tag="VHX39_15230"
     CDS             complement(820..1656)
                     /locus_tag="VHX39_15230"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3992520.1"
                     /translation="MIDAQVHAYAANTPERPWHSVPNWPAHVTGDEMVAAMDKLGIPG
                     AIYISPFSMYQYDGSYAVSVQKAHPDRFALVKPVDPDDPAVADVIAAWKKTPGTVGIR
                     IIMTKESKRGPDDPGFDRILRAAAQHNFPVNVLFWGNVDAGTALIDRHPNARFIIDHM
                     GIQQPSVPPAPPEPWADLPKVVELAKRKNAVIKITGACTLSKQPYPFPDIWDPLARIF
                     DAWGFDRCLWGTDWTRASAVVNYEQAVEPFLTTNRLSASERAMLMGGATAKAYGWSPK
                     KA"
     gene            1954..>2194
                     /locus_tag="VHX39_15235"
     CDS             1954..>2194
                     /locus_tag="VHX39_15235"
                     /inference="COORDINATES: protein motif:HMM:NF022479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2721 domain-containing protein"
                     /protein_id="HEX3992521.1"
                     /translation="MLGFETDNPPTPDLVAHIIQVSLSPVFLLTALGTLLSVFSLRLA
                     RVADRVDSISEATKVASPDEARVLSLQLVHFRRRSL"
BASE COUNT          373 a          649 c          673 g          499 t
ORIGIN      
        1 aaacgtaccg gatgattttt tggctggaat cgcagcctgt gtcggttatt gtcgttatcg
       61 ggtacgcgct ttgtttctcg atggccgcag cgaccttcat cgttggttgg ctattgtcgc
      121 ggacgcggtt cgctgatgat ctcgggtttg tgacacccac tctgctcaca ccgcttgggg
      181 tgatccttgg tctgctgctg gtgtttctct cttcccgcgt ctggacgaat gttgaccgtg
      241 ccggtgcagc gtctgggcgg gaggcgaccg cggtccagga gctccgccga accgcagacg
      301 agatgccttc tgcagtggcg gacccaatcc gggacggtgc gcgtacatac ctcgagtggg
      361 tgcggcagga agattggccc aggatgatgt ccggcaaagg atcgctcaac tcgagattgc
      421 cgggcctggc ggatgcaacc atggcgctcg ccgattacaa cgccaccatt tcagggcagc
      481 gggctgtgca ggaggaggcg ctggcagcca tcgagaaggt aagggacgcg cgccgtgctc
      541 gtatcctgca aagtagatcg tttatcggac ggggccagtg gatggtcgtt ctggcactgt
      601 atcttcatgt gctgttgtcg atcgcgacca ttcatgtcaa gcgccgcatg tccatggcga
      661 tcgcgctttc gatgttctcc tcggcgtttg ccatctgctt cgttttgctg ctggtgtacg
      721 ataatccatt ccgttccggc ggattgaccg tcggcccggt cgatatcgag accccgctgg
      781 cggaatgaac gtgacgcacc acggaagctg caggtcacgc tacgcttttt ttggcgacca
      841 gccgtacgcc ttggcggttg cgccacccat cagcatggcc cgttcgctgg cgctcaggcg
      901 gttggtcgtc agaaaaggtt cgacggcttg ctcgtagttg acgacagcgg atgcgcgcgt
      961 ccagtcggtg ccccacaagc aacgatcgaa accccatgcg tcgaatatgc gagccagcgg
     1021 atcccagatg tcagggaacg gatatggctg ctttgacagc gtgcaggcgc cggtgatctt
     1081 aattaccgca ttctttctct tggcgagttc caccactttc ggcagatcgg cccatggctc
     1141 gggcggcgcc ggaggcacgc tcggttgctg gatgcccata tggtcgatga tgaaccgcgc
     1201 gttgggatgg cgatcgatca gtgccgtgcc ggcgtcgaca ttaccccaaa acagcacatt
     1261 aaccggaaaa ttgtgctgag ccgccgcccg caggatccgg tcgaagccag gatcgtctgg
     1321 cccccgtttg gactctttgg tcatgatgat gcggatgccg accgtccccg gggtcttctt
     1381 ccaggcggcg ataacatcgg cgaccgccgg atcgtccgga tccactggct tgaccagtgc
     1441 gaagcggtcc gggtgagcct tctgcacgct cactgcgtag ctgccgtcgt attggtacat
     1501 cgaaaacggc gagatgtaga tcgcgccggg aatgccgagt ttgtccatcg ccgccaccat
     1561 ctcgtcgccg gtgacatgcg cgggccagtt tggcacgctg tgccacggcc gctccggcgt
     1621 attcgccgca taggcgtgga cctgggcatc gatgatcgtt ttgggacgct gctgtgcttc
     1681 agcgtgtggc gcgcgctaca gcgcagaccc ggaggcagcc agcgccgtcc cgatctgcaa
     1741 cacgccacgc cggctgatgc gtctctctcc acccgttgat cggttcgcca tttttcgttt
     1801 ccccggacgt tgcgtcactg attcttgcgc tcaccggcat tgtggacttc ccttggctcc
     1861 ggtcaagcaa gcttgcccgt gctaactcaa accgtacacg caacgacgca ccgcgggctt
     1921 caggacgatc aaaattgagg aaagggcatc cccatgcttg gattcgagac cgacaacccg
     1981 ccaacgccag atctcgtagc gcacatcatc caggtgtctt tatcgccggt gtttttgctt
     2041 acggcgttgg ggactttact aagcgtgttt tcgttgcggc tcgcccgcgt ggcggacaga
     2101 gtcgattcaa tctcggaggc aacaaaagtt gcttcccctg atgaagctcg cgtgttgtcg
     2161 ctgcagctcg tgcactttcg acgcaggtct cttg
//
LOCUS       DATAVD010000796         4245 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_633622, whole genome shotgun sequence.
ACCESSION   DATAVD010000796 DATAVD010000000
VERSION     DATAVD010000796.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4245
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_633622"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            23..832
                     /locus_tag="VHX39_15240"
     CDS             23..832
                     /locus_tag="VHX39_15240"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEX3992522.1"
                     /translation="MLFIDQSDPDALATAMVRAPKLVLVETPSNPLMRVVDIRDIAER
                     AKAVGAKTIVDNTFLSPALQRPLTLGADLVVHSTTRFLNGHCDVVGGVVVAAAQSDVE
                     ALRYWANITGTTGAPFDSFLTLRGIRTLFTRVAAQQKTAATIATFLASHHAVRAVHYP
                     GLASHPGHAIARAQQSGFGSMLSFEIEGGVEAARRFVETVELFTLAESLGGMNSLVSH
                     SATMTHASMSLAARREAGLSDSLLRLSIGLENEADLLDDLARGLDAAQRRE"
     gene            907..1728
                     /locus_tag="VHX39_15245"
     CDS             907..1728
                     /locus_tag="VHX39_15245"
                     /inference="COORDINATES: protein motif:HMM:NF041278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CmcJ/NvfI family oxidoreductase"
                     /protein_id="HEX3992523.1"
                     /translation="MPLDAAVQPKNVTATLFYQIRTDRKPERYVGGLPPGVVPFTGID
                     DPRDVLIQDGRGRESEFTLDRNGFQMVRAPTQVRDFYDREHVKSVYYPEVEQLLLTTL
                     GASRVVVFDHGTRNASREGQAKPSRQVHNDHTINSAPRRVRDHLGDDATELLKHRFGV
                     VNVWRPIRGPVIDSPLALCDARTFTDEDLIASDLVYRHVRGETSRVQFRPDHRWFYFS
                     EQQTDEVLLIRVHDSANDGRARLSFHTSFENPAAVDVPPRESIEVRSLVFFPPEN"
     gene            2217..3344
                     /locus_tag="VHX39_15250"
     CDS             2217..3344
                     /locus_tag="VHX39_15250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX3992524.1"
                     /translation="MSDQLTRPEPLARTTDAAEVPPPREAAHQRFRWRGVAIRLFILL
                     LAGGLVAVVALQFDWWVGSGRWQTTDDAYLTADLTPLAAKVPGYVRRVVVHDFQNVKA
                     GDLLVQVVDDDYRAQVNQAEGNVASAEATADTIVRQKQLQVASIAEAEATIHASEADL
                     TRYHLETVRQESLLETGIAGTHQIVEQAVDNEQRAAATLAVNRAKLSQQVEQLNVLAS
                     QEMQARATITVQQAAADLARINLGYTRIVAPVDGMVGQRQVQDGQYVSAGTQVISLVP
                     LPNIWVIANYKETQMTRVRLGQPARVTVDAFPGAVLKGHVDSWSPASGAQFSLLPPDN
                     ATGNFTKVVQRIPVKIVLDPDPAVDDLLRPGMSAIPTIDTK"
     gene            3341..>4245
                     /locus_tag="VHX39_15255"
     CDS             3341..>4245
                     /locus_tag="VHX39_15255"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992525.1"
                     /translation="MNAIRDVRHWFAWRGPGGTADALCHPHDKAAHTHPVMSPRPFIG
                     VLAVLLGSILATLDSRITTFGLADVRGAVHASFDEGAWVTTALTVGQMLIGPVSPWLG
                     AVFGVRRVLMVSATVFACSNFLLPFSPNVGWVLGFQLVSGIASGTFIPLTIGFTVLSL
                     PPRMVVYGVAAYALNLELSLNIAASIEGWFCDNWSWHWIFWDTALASPLMVLCIHFGM
                     PRQPINQELLRNADWAGIVYAALGFSLLYVALDQGNRLDWLNSGVITGLLIGGGLLVA
                     AFIVQELTSHRPWINLRYAAKGNIPL"
BASE COUNT          780 a         1312 c         1316 g          837 t
ORIGIN      
        1 caaggcgaaa cgatagttcg acgtgctgtt catcgatcag agcgacccgg acgctctggc
       61 caccgcaatg gtgcgagcgc cgaaactcgt actggtcgag acgccgagca atccattgat
      121 gcgtgtcgtc gacattcgcg atatcgccga gcgcgccaaa gccgtcggtg cgaagaccat
      181 cgtcgacaac acattccttt cgcctgccct gcagcgcccg ctgacgcttg gcgccgatct
      241 ggtggtgcat tcgaccacca ggtttctcaa tggccattgc gatgtggtcg gcggcgtggt
      301 cgtcgcggca gcccaatccg acgtcgaagc actgcggtac tgggctaata tcaccgggac
      361 cacgggtgcg ccattcgatt cctttctcac attgcgtggc attcgcacat tgttcacccg
      421 ggttgcagcg cagcaaaaaa ccgcggccac gattgcaaca tttctcgcca gccatcatgc
      481 ggttcgcgcg gtgcattatc cgggcctggc ctcgcatccg ggccacgcga tcgcccgcgc
      541 gcagcaaagc ggattcggct cgatgttgag tttcgagatc gagggcggtg tcgaggcggc
      601 tcgccggttt gtcgaaacgg tcgaattgtt cacgctggcg gaatcgcttg gcggcatgaa
      661 cagcctcgtt tcacattcgg cgacaatgac gcatgcaagc atgagtttgg ctgcgcgacg
      721 cgaagccggc ctcagcgaca gtttgctgcg gctgtcgatc gggctggaga atgaggccga
      781 tctgctggac gaccttgcgc gtggcctgga cgccgcacaa cgacgagaat aaggttttct
      841 cttccgatcg ctggacgcgt gcccggcgca ataattttct tggaacgatg tcggaggagc
      901 caaaccatgc cactagatgc cgccgtacaa ccaaagaatg tcaccgcgac gttgttttat
      961 caaattcgca ccgaccgcaa gccggaacgc tatgtcggcg ggctgccccc cggcgtggtc
     1021 ccgttcaccg gcatcgatga tccgcgcgac gtgttgatcc aggacggccg cggccgcgag
     1081 tcagagttca cacttgaccg taacgggttc cagatggtgc gcgcgccaac ccaggtgcgt
     1141 gatttctacg accgggaaca tgtgaagagc gtttactacc cggaagtgga gcagctgctg
     1201 ctgacgacgt tgggcgcctc gcgggtcgtc gtgttcgatc acggtacgcg caatgcgagc
     1261 cgtgaaggcc aggccaaacc atcgcgtcag gtgcataacg atcacaccat caactcggca
     1321 ccgcgccggg tgcgcgatca cctcggcgac gacgcgacgg aactgttgaa gcaccggttc
     1381 ggcgtggtga acgtgtggcg gccgatccgc gggccggtga tcgattcacc gctggcgctg
     1441 tgcgacgcgc ggacgttcac cgacgaggat ctgatcgcca gcgatctggt ctacaggcac
     1501 gtgcgcggcg aaacctcgcg ggtgcagttc aggccggacc atcgttggtt ctatttctcg
     1561 gagcaacaga ccgacgaggt gctgctgatc agagtgcacg acagcgccaa cgacggtcgc
     1621 gcaagactgt cgttccatac ctcgttcgaa aatccggccg ccgtcgatgt gccgcccaga
     1681 gaaagcatcg aggtaaggtc gttggtgttc tttccgccgg agaactgatc ggagccggat
     1741 gccgccgccc ggggttgggc ggcggccttg cagaaagcgt cacattcagt tcgcgacctg
     1801 aggtcggccc gccattcggg ttaacgtact tttccaccgt catggcccgg ctcgtccggg
     1861 ccacctgatg aagcactata ccggctccga tggcctggac gagccaggcc atgaccggat
     1921 gatgagccaa ctcgacgcaa tcatacttta atgggcgccc cgaccgtatc aacgcactgc
     1981 acaatcggcg ccgaattgct cagtcgacgt cacaaaacag tgcgaatgtg aaaatcgtcg
     2041 gttgttcagg aaatacaaaa ccgcttgcag gccgaatata tcgacgacag tatccggcga
     2101 cggggcattc ctgggacttc cgattttccg cgaccgagcc actctcatcg cctcgccagg
     2161 agtgatttta tgcaagagca tcccttgcgg tttggcctcg tcgatgcgct ggcgtcatga
     2221 gcgatcagct taccagaccg gagcccctgg cacgcacaac cgacgccgcc gaggtgccgc
     2281 cgccacgcga ggcagctcac cagcgcttcc ggtggcgggg cgtcgcaatc aggctcttta
     2341 tcctgctgct tgccggcggt cttgtcgccg tggtcgcgtt gcaattcgac tggtgggtcg
     2401 ggtcaggccg gtggcagacg acggacgacg cctacctcac cgccgacctg acgccacttg
     2461 ccgcaaaggt ccccggctat gtgcgccgtg tcgttgtgca tgactttcag aatgtgaagg
     2521 ccggcgatct gctggttcag gtcgttgacg atgactaccg cgcgcaggtc aatcaggccg
     2581 agggaaatgt ggcctccgcc gaggccacgg ctgacaccat cgtgcggcag aagcaattgc
     2641 aggtcgcatc gatcgccgag gccgaggcga caatccacgc aagtgaggcg gacctgaccc
     2701 gctatcacct ggaaaccgtg cgccaggaat ccctgctcga gaccggcatc gccggcaccc
     2761 accagatcgt cgaacaagcc gtcgacaacg agcaacgagc cgcagcaaca ctggcggtga
     2821 atcgggcgaa gctgtcccag caggtcgaac agttgaatgt gctcgccagc caggagatgc
     2881 aggcgcgcgc gaccatcacc gtgcagcagg cggcagccga cctcgcacgg atcaacctgg
     2941 gctacacccg catcgtggca ccggtcgatg gcatggtcgg ccaacgccag gtgcaggacg
     3001 gccaatatgt cagtgccggg acgcaggtga tatccctcgt gccgttgccg aacatttggg
     3061 tcattgccaa ctacaaggag acgcagatga cccgcgtccg tctcggccag ccggcgcgtg
     3121 tcacggtgga cgccttcccc ggcgcggtgc tgaagggtca cgtcgatagt tggtcccccg
     3181 cctccggtgc acaattctcg cttttgccgc ctgacaatgc gaccggcaac ttcaccaaag
     3241 tggtgcagcg gattccggtg aagatcgtgc tggatcctga tccggcggtg gacgatctgc
     3301 tgcgtcccgg catgtcagct atcccgacca tcgacacgaa atgaacgcga ttcgtgacgt
     3361 gcggcattgg ttcgcctggc gtggacccgg cgggactgcc gatgccctgt gtcaccctca
     3421 cgacaaggcg gcgcacaccc acccggtgat gagcccacgg ccgtttatcg gcgttctggc
     3481 ggtgctgttg ggctcgatcc tggcgacgct cgactcccgc atcacgacgt ttggcctggc
     3541 cgacgtacga ggtgccgtgc atgcaagttt cgacgagggt gcctgggtca cgaccgctct
     3601 caccgtcggt caaatgctca tcgggccggt ctcgccgtgg ctgggcgccg tcttcggcgt
     3661 gcgccgggtg ttgatggttt ctgcaacggt gttcgcttgc tcgaatttcc tgctgccgtt
     3721 ttcgcccaat gtcggctggg tgctcggatt tcagctggtc agcggcatcg cctcgggcac
     3781 tttcattccg cttaccattg gcttcacggt gctgagtttg ccaccgcgga tggtggtcta
     3841 cggcgtcgca gcctatgcat tgaatcttga gttgtcgctc aatatcgccg cgtcaatcga
     3901 gggctggttt tgcgacaatt ggtcctggca ttggatcttc tgggacaccg ccctcgcgtc
     3961 gccgctgatg gtgctttgca tccacttcgg catgccgcgc cagccgatca atcaggaatt
     4021 gctccgcaac gcagattggg ccggcattgt ttatgccgcg ctcggattta gtttgctcta
     4081 cgtcgccctc gatcagggca accggctcga ctggctgaat tcaggggtga tcaccggatt
     4141 gctgatcggc ggcgggttgt tggtggccgc cttcatcgtg caggagctta cgtcgcaccg
     4201 gccgtggatc aacctgcgat acgcggcaaa aggcaacatt ccgct
//
LOCUS       DATAVD010000797         3013 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_76866, whole genome shotgun sequence.
ACCESSION   DATAVD010000797 DATAVD010000000
VERSION     DATAVD010000797.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3013
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76866"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..490
                     /locus_tag="VHX39_15260"
     CDS             <1..490
                     /locus_tag="VHX39_15260"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3992526.1"
                     /translation="LWGVINGVQIFTPSMLAQRNACAIVNTGSKQGITCPPGDTAYNV
                     SKAGVKVLTEALAHSLRNEEGARISAHLLVPGSTFTGMTRRNRTEKPPGAWTPEQVVD
                     MLVERMNRGDFYIICPDNEVTTEVDNKRILWGAQDITENRVPLSRWHPDYKEAFEAFL
                     KR"
     gene            complement(559..1212)
                     /locus_tag="VHX39_15265"
     CDS             complement(559..1212)
                     /locus_tag="VHX39_15265"
                     /inference="COORDINATES: protein motif:HMM:NF014816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX3992527.1"
                     /translation="MTITITAFERSPDGGRGLARDTRVRWALEEVGQPYEVRLVSFRA
                     MKEPAHLALHPFGQIPTYEEGDLALFETGAIVFHIAEHHAGLLPEDANARARAITWMF
                     AALNTVEPPIFELTTARILESDKPWSKQRMPLVESRVRGRLEQLSARLGDADWLDGGF
                     GAGDLLMVSVLLRVRLSGILDEYPNLAAYVARGEARPAYKRAFVAQLAVNTATPPTD"
     gene            complement(1390..2079)
                     /gene="msrA"
                     /locus_tag="VHX39_15270"
     CDS             complement(1390..2079)
                     /gene="msrA"
                     /locus_tag="VHX39_15270"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012226926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEX3992528.1"
                     /translation="MIKTSIVATAVLALAVGSARADAAGHALPPPTVDEAPSTGPQTA
                     VFSGGCFWGVQGVFEHVKGVTRAVSGYAGGHVANPNYEQVSSGSTGHAESVKVTFDPA
                     KVSYGTLLRIFFSVALDPTQKDRQGPDWGTQYRSELFVNNAGQQRVAEAYIAQLDAAH
                     AFGKPIVTRIDQAGPFYPAEAYHQDYLDLHPDQPYIAINDIPKVEALQALFPGNWRPT
                     PVKVGQLASTD"
     gene            complement(2148..>3013)
                     /locus_tag="VHX39_15275"
     CDS             complement(2148..>3013)
                     /locus_tag="VHX39_15275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992529.1"
                     /translation="LGIMMTGGGFGSLIGGQLFALVGPYGWRYVMFTGVLPAIILVLL
                     RRGLEEPEHFQAVAARRRAIRAQRQQSATDQAYLRFTPAQLFSPELRYTTFIGVLFCL
                     GTLLAIWTSAIWLPTIQGQLLAKQGITGPAAAPFIGHGMMLWGLGGIIGYATFGFIAD
                     AIGRRSTIIFYNVGTIAVGLYMYLWVDTWNLYPYLLPLFGYFVFGVFSGHAVYLPELF
                     PTHVRATAVSFCNGSGRVVTSFGPLVAGLLVGMMGGSFNQATAIITCFAGLSIIAALL
                     GRETKDEVLPD"
BASE COUNT          582 a          887 c         1015 g          529 t
ORIGIN      
        1 tctttggggc gtgatcaacg gggtgcagat tttcacgccg tccatgctgg cgcagcgcaa
       61 cgcgtgtgcc attgtcaata cagggtcgaa acaggggatt acctgcccgc cgggcgatac
      121 cgcgtataac gtcagcaagg ccggggtgaa ggtgctgacc gaagcgttgg cacatagtct
      181 gcgcaatgag gagggtgcgc ggatctcggc gcatctgctg gtgccggggt ctacatttac
      241 cgggatgacg cggcgcaatc ggacggaaaa gccgccgggc gcgtggacgc cggagcaggt
      301 ggtggacatg ttggtcgagc ggatgaaccg gggggatttc tatatcatct gcccggataa
      361 cgaggtgacg accgaagtcg acaacaaacg gattttgtgg ggtgcgcagg acattacgga
      421 gaaccgggtg ccgctgtcgc gctggcaccc ggattacaag gaggcgttcg aggcgtttct
      481 gaagaggtaa tccagcgtcg gcacccgcaa gctgacgaaa aatctcgatg gtgacttcga
      541 gcttaggacg cagctcaatc aatcggtcgg tggcgtggcg gtgttgaccg ccaattgcgc
      601 gacgaaagcc cgcttgtagg cgggccgcgc ttcgccgcgc gccacatagg cagccaggtt
      661 cgggtattcg tccaggatgc ccgacagtct caccctgagc agcaccgaca ccatcaacag
      721 gtcgcccgcg ccgaacccac catcgagcca gtcggcatcg cccaggcgcg cggaaagttg
      781 ctccaaccga ccgcggacgc ggctctcgac caacggcatg cgctgcttgc tccagggctt
      841 gtcgctttcc agaatcctgg cggttgtgag ctcgaagatc ggcggttcca ccgtgttgag
      901 ggcggcaaac atccaagtga tcgcgcgcgc tcgggcattg gcatcttccg gcagcaggcc
      961 ggcatgatgt tcggcgatat ggaagacgat cgcgcccgtc tcgaacaggg cgaggtcgcc
     1021 ttcctcatag gtgggaatct ggccgaacgg atgcagtgcc agatgcgcag gctccttcat
     1081 cgcgcgaaac gaaaccagac gaacctcgta gggttgacct acttcttcaa gcgcccagcg
     1141 gacgcgggta tcacgcgcca gccccctgcc gccgtcgggc gatcgttcaa aggcggtgat
     1201 ggtaatggtc atcgtgaggc acctcctcgg cgggctggga cttcgccgga cgcggcgtcg
     1261 cgtgttgatg cgtcctgcgc ttggtatcgc gcatcataga agcgcgatac gtcgcagttt
     1321 tatctgaatg accgattcac gcgggaaatc gcggtcacct cgtgacccgc gctttactgc
     1381 gatcgggtac tagtcggttg atgccaactg gccgaccttg accggcgtcg gacgccaatt
     1441 tccggggaac aatgcttgca gcgcctcgac cttcgggatg tcgttgatcg cgatgtacgg
     1501 ctgatccggg tgcaggtcga ggtaatcctg atgataggcc tcggccggat agaacgggcc
     1561 ggcctggtcg atacgggtga cgatcggctt gccgaacgcg tgcgcagcgt cgagttgcgc
     1621 gatgtaggcc tcagcgacac gctgctgtcc ggcgttgttc acgaacagtt cggagcggta
     1681 ttgcgtgccc caatcagggc cttggcggtc tttctgggtg gggtcgagcg cgaccgagaa
     1741 gaagatgcgc agcagcgtgc catagctgac cttggcgggg tcgaaggtca ctttcaccga
     1801 ttccgcgtgg ccggtgctgc cggaactgac ttgttcatag ttcggattgg cgacgtggcc
     1861 gccggcgtaa ccggagacgg ccctggtgac gcctttcacg tgctcgaaca cgccttgcac
     1921 gccccagaag cagccgcccg agaagacggc ggtctgcggg ccggtggatg gtgcctcatc
     1981 cacggtgggg ggcggcaagg cgtgaccggc ggcgtccgct cgcgccgatc ctacggccaa
     2041 tgccaatacg gccgtagcga caatcgacgt cttgatcata actccgctcc tgacaatgca
     2101 ggtgcgagat agcacgggcg gacggacact gacgactgat tccgggttca gtccggcagc
     2161 acctcatcct tggtttcccg cccgaggagc gcggcgatga tgctgaggcc ggcgaagcag
     2221 gtgatgatgg ccgttgcctg gttgaacgag ccgcccatca tcccgaccag gagtccggcg
     2281 accagcggcc cgaagctggt gaccacgcgg ccggagccgt tgcagaagga gacggcggtg
     2341 gctcgcacat gggtcgggaa cagttcaggc aggtagaccg cgtggccgga gaacacgccg
     2401 aaaacgaaat agccgaacag cggcagcaga taggggtaga ggttccaggt atccacccac
     2461 agatacatgt agagcccgac ggcgatggtg ccgacattgt agaagatgat ggtcgaccgg
     2521 cgtccgatcg catcggcgat gaagccgaac gtcgcgtagc cgatgatccc gcccaatccc
     2581 cacagcatca tgccgtgccc gatgaacggc gccgccgcgg gcccggtgat gccctgcttc
     2641 gccagcaact gcccctggat cgtcggcagc cagattgcgc tggtccagat cgccagcagg
     2701 gttccgagac agaacagcac cccgatgaac gtggtgtagc gcagttccgg tgagaacagt
     2761 tgcgcggggg tgaagcgcag ataggcctga tcggtcgccg attgctggcg ttgcgctcgg
     2821 attgctcgac gcctggcggc gacggcctgg aaatgttcgg gttcttcgag accgcggcgc
     2881 aacaagacca ggatgatcgc cggcaacaca ccggtgaaca tcacgtagcg ccagccgtat
     2941 ggtccgacga gggcgaaaag ctggccgccg atcaggctgc cgaagccgcc gccggtcatc
     3001 atgatgccca gga
//
LOCUS       DATAVD010000798         4192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_77025, whole genome shotgun sequence.
ACCESSION   DATAVD010000798 DATAVD010000000
VERSION     DATAVD010000798.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4192
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77025"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1858
                     /locus_tag="VHX39_15280"
     CDS             <1..1858
                     /locus_tag="VHX39_15280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX3992530.1"
                     /translation="TPGLCPCGSGLRPARCCALQVGSIPPAEATRHLVPLVERAIQAY
                     QQGAKDVAERLCLDVLELAPDRPGALSVLYSIRKEQGRAAAAQALIRRLVHFEPNNFE
                     ATNELALLLLGKGALGEAEIHARNAIRIAPQAPQAHNLMGMIMTEAQRPRLGEYHYRK
                     VLEITGTRDPIVLANLAWCLKNQGRMEEARALYVESTATAPDIRETLLGWARLEEADR
                     NFAAAGEILDRLDARFPNDPGSVLTRAVLLGRMKRPDDALALLDRKAPAPEGTTQSGA
                     IGDSLASAPIGLGPTELSEKGRLLDQLDRHDEAWAAFVEGKRLARELTGSAYLDQLAG
                     DAIARLRGFFVSGRLALLPRAGVRSDVPQPVFVLGFPRSGTTLVEQTLSAHPAISAGD
                     ELPLINDITNIMPRMLNSPLQYPEALAELWMGDQRDGLDNLRDYYLQKAAQMAVAEPG
                     AAWFTDKMPLNETHLGLIALLFPASPLIHVIRHPLDVMISALSNHFTHGYFCATALES
                     AATHYVRVMDLVMHYRAEMALRYLPVRYDAMVTNQEETVRSILDFIGVPFDERCLSFH
                     ENRRYARTASYAQVTEPLYDRSLYRYRNYRQHLEPVIPILRPTIERLGYTVD"
     gene            1851..3236
                     /locus_tag="VHX39_15285"
     CDS             1851..3236
                     /locus_tag="VHX39_15285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014242269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat-containing
                     glycosyltransferase family protein"
                     /protein_id="HEX3992531.1"
                     /translation="MTDRALPEVPLAFGDLMMLAARLENEKDYGFADRLLERALMVAP
                     DQPDALHLSGIVAFRLGRREEALGKIERAIERGVDIRLYLRNISEVYRNLGRFDDALN
                     AALRAAAMAPDDPVCLHNLAVIQYHRLELDDCIASAEKALQINAFQPGPHFQLAEALL
                     LRGEWERGWNEYQWRFDLPGTAPLMPPTTQPRWDGTPFDDGTLMLIADQGFGDVIQFS
                     RYIPWAAERCPNIAIATATEMMPLLRQVYPAAHLFNEWRAAPPFRAFRALSGLPALHG
                     TRPDFVLGDRPYLRADPARAAVWKERLDRLTPTGRRRIGIVWAGRPTHNNDRWRSAKL
                     ADFAPLAALPGVALISLQKGPAAAQAGAYFGAAPLVNIGAEVTDYEDTMAILESLDLL
                     VTVDTSVCHVAGAMGCKTFVLLARAPDWRWLLERTDTPWYPSLTLVRQNTTGVWADAM
                     QRAAELVAAAA"
     gene            3284..4126
                     /locus_tag="VHX39_15290"
     CDS             3284..4126
                     /locus_tag="VHX39_15290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00282 family metallophosphoesterase"
                     /protein_id="HEX3992532.1"
                     /translation="MRILFMGDVVGRTGRDTLGLQLPRLRQAMGIDLAIVNAENASHG
                     FGLAPDMATALFAAGADVITLGNHAWDRKEIIPYIAQTPRLIRPLNYPPETPGGGFVV
                     VEVSGGRRALVLQVMGRLYMDPLDCPFRTTADLLTRYRLGGTVQAIFADIHAEATSEK
                     MAYAHVFDGQMSCVVGTHTHCPTADAQIFPGGTAFQSDAGMCGDYDSVIGMTKDGAAL
                     RFWRKMPGERLGPAEGEATLCGVFVETDDLTGLALRIEPVRVGGRLAPAMPELSRHVF
                     AAPG"
BASE COUNT          690 a         1263 c         1390 g          849 t
ORIGIN      
        1 aacccccggt ctttgcccct gtggcagcgg tctccggccc gcgcggtgct gcgccttgca
       61 agttggttcc attccgcccg ccgaggcgac ccgccatctg gtgccgttgg ttgagcgcgc
      121 cattcaggcc taccagcaag gcgccaaaga cgtcgccgag cggctgtgcc tcgacgtcct
      181 ggaactcgcc ccggaccggc cgggcgcgct gtcagtgttg tattcgatcc gcaaggaaca
      241 gggccgggct gccgccgccc aggcgctgat ccgcagattg gtgcatttcg agccgaataa
      301 ttttgaggct accaacgaac tcgccctgct gcttctgggc aaaggtgccc tgggcgaggc
      361 agagatccat gcccgcaacg cgattcggat cgctccccag gccccgcagg cgcacaatct
      421 gatgggcatg atcatgactg aggcgcaacg gccgcgtctt ggtgagtatc attaccgtaa
      481 ggtgctcgag atcaccggca cccgcgatcc gatcgtgctc gccaatctgg catggtgcct
      541 gaaaaatcag ggccgcatgg aggaagcccg ggcactgtat gtcgaatcaa ctgcgaccgc
      601 accggacatt cgtgaaacct tgcttggatg ggccaggctc gaggaagccg atcggaattt
      661 cgccgccgcg ggggagatac ttgaccgcct ggatgcgcgg tttcccaacg atccgggttc
      721 ggtgctgacc cgcgcggtgc ttttgggccg aatgaagcgg ccggatgacg cgctggcttt
      781 gttggatcgc aaggcgcctg cgcctgaggg caccacgcaa tcgggcgcca ttggtgacag
      841 cctcgcgtcg gcgccgatcg gtcttggtcc aaccgagctt tcggaaaagg gtcgcctgct
      901 ggatcaactc gatcgccacg acgaggcctg ggctgcgttc gtcgagggta agcggctggc
      961 ccgcgaactg accggcagtg cttacctgga tcagcttgcg ggcgatgcaa ttgcgcggtt
     1021 gcggggattt tttgtttccg gccgtttggc gttgctgccg cgcgccggtg tccgcagcga
     1081 tgtgccgcag ccggtgttcg ttctgggttt tcctcgttcg ggcaccacgc tggtggaaca
     1141 aacgttatcg gcgcatccgg cgatctcggc gggcgacgag ttgccgctga tcaacgacat
     1201 caccaacatc atgccgcgga tgcttaacag cccgttgcag tatcccgagg cgttggccga
     1261 attatggatg ggcgaccagc gggacggatt ggataatctg cgcgactact acttgcagaa
     1321 ggcggcacaa atggcggtgg ccgagccggg cgcggcctgg ttcaccgata aaatgccgct
     1381 gaacgaaacc cacctcgggc tgatcgccct gctgttcccg gcctcgccgc tgatccatgt
     1441 catccggcat cctttggatg tgatgatttc tgccttgtcc aatcatttta cccatggtta
     1501 tttttgcgcc actgcgctgg agtcggcggc gacgcattat gtccgggtga tggatctggt
     1561 gatgcattac cgcgccgaaa tggcgttgcg gtatctgccg gtccgctatg atgcgatggt
     1621 gaccaatcag gaggagaccg tccgctccat cctggatttc attggggttc cgttcgacga
     1681 acgttgtctg agcttccatg agaaccgccg ctacgcccgc accgcaagtt acgcccaggt
     1741 aacggaaccg ctgtacgatc ggtctttgta ccggtatcgg aattatcgtc agcacctgga
     1801 accggtgatc cccattttgc gtccgacgat cgagcgtctg ggctatactg ttgactgacc
     1861 gcgctctgcc cgaggtcccg ctggcattcg gcgaccttat gatgttggct gcccggctgg
     1921 agaacgagaa ggactatggc ttcgccgacc gtctgctgga acgggccctg atggttgcgc
     1981 cggatcagcc cgacgcgttg catttgtccg gaattgtcgc ctttcgcctg ggccggcgcg
     2041 aggaagcgct tggcaaaatc gagcgtgcca tcgaacgcgg cgtcgacatc aggttgtatt
     2101 tgcgtaacat ctcggaagtc taccgtaacc tgggccgttt tgatgacgca ttgaacgcag
     2161 cgctgcgggc ggcggcgatg gcgccggacg atccggtttg cctgcacaac cttgcggtta
     2221 ttcaatacca ccggctggaa ctggacgatt gcattgcgtc ggcggaaaag gcgctgcaga
     2281 tcaacgcatt ccagcctggt ccgcattttc agcttgccga ggcgctgttg ctgcgcggtg
     2341 agtgggagcg cggctggaac gaatatcaat ggcgcttcga tctgccgggt actgcgccgc
     2401 tgatgccgcc gaccactcag ccgcgttggg atggcacgcc gtttgacgac ggcacgctga
     2461 tgttgattgc cgaccagggt ttcggcgatg tcatccagtt cagccgctat attccctggg
     2521 ctgccgagcg ctgcccgaac atcgccattg cgactgccac agaaatgatg ccgttattgc
     2581 ggcaggttta cccggccgct cacttgttca acgagtggcg tgccgcgccg ccgtttcgtg
     2641 ccttccgagc attgtccggc ctgccggccc tgcatggcac gcggccggat tttgtactgg
     2701 gcgacaggcc gtatttgcgt gctgatccgg cccgggccgc ggtctggaaa gagcgtctcg
     2761 accggctgac gccaaccggc cggcggcgga tcggcatcgt ttgggcggga cggccgacgc
     2821 acaacaatga tcgctggcgg tcggcgaaac tggcggattt cgcacccctg gcggcactgc
     2881 cgggcgtcgc actgatttcg ctacagaaag gcccggctgc ggcgcaggcc ggggcgtatt
     2941 tcggtgccgc gccattggtg aatatcgggg cggaagtcac cgattacgag gacaccatgg
     3001 cgatcctgga gtcgctcgat ctgctggtca cggtcgacac ctcggtctgc cacgtcgccg
     3061 gggcgatggg ttgcaagacg ttcgttttgc tggcgcgcgc accggattgg cgttggttgc
     3121 tggagcgcac cgatacgcca tggtatccgt cgctgaccct ggtccggcaa aacaccaccg
     3181 gggtgtgggc cgatgcgatg cagcgggcag cagagttggt tgccgcggcg gcgtgatcat
     3241 gccccgatga caccgtggca ataaccgggc tattcccatc gccatgcgca ttttgttcat
     3301 gggcgatgtc gtaggccgta ccggccggga cacgttgggc ttgcagcttc ctcgcctgcg
     3361 tcaggcgatg gggatcgatc tggcgatcgt caacgcggaa aatgcttcgc acggcttcgg
     3421 ccttgcgccg gatatggcca cggcgctgtt cgccgccggg gccgacgtga tcacgcttgg
     3481 caaccacgcg tgggaccgca aggagatcat tccttatatc gcacagaccc cgcggctgat
     3541 ccgcccgttg aattacccgc cggagacgcc gggcggcggt ttcgtcgtgg tcgaggtcag
     3601 tggagggcgg cgcgcgctgg tgctgcaggt gatggggcgg ctgtatatgg acccgctcga
     3661 ctgtccgttt cgcaccaccg cggatttgct gacgcgttac cggcttggcg gcacggtgca
     3721 ggccatcttc gcagacatcc atgccgaggc gacctcggag aaaatggcct atgcgcacgt
     3781 gttcgacggc cagatgtcgt gcgtggtggg cactcacacg cactgtccca cggccgacgc
     3841 gcagatattc ccgggcggca cggcattcca gtcggatgcc ggcatgtgcg gcgactacga
     3901 cagcgtcatt ggcatgacca aagatggcgc ggcgttgcgg ttctggcgca aaatgccggg
     3961 tgagcgtctg ggcccggccg aaggcgaggc caccttgtgc ggcgtgttcg tggagacgga
     4021 cgatctgacc ggccttgcgc tgcggatcga gccggtgcgg gttggcggac gattggcgcc
     4081 ggcaatgccg gaattgtcgc gtcatgtttt cgcggcgcca ggctgatcca attggaaccg
     4141 ccgaggccac ggcggcgtga attatgcccg ggtccgcccg gcagtggcac gg
//
LOCUS       DATAVD010000799         3575 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2307038, whole genome shotgun sequence.
ACCESSION   DATAVD010000799 DATAVD010000000
VERSION     DATAVD010000799.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3575
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2307038"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(173..2515)
                     /locus_tag="VHX39_15295"
     CDS             complement(173..2515)
                     /locus_tag="VHX39_15295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3992533.1"
                     /translation="MAQEHSVRARGVGASMLRKEDDRHLRGRAQFVADITLRGTQEVV
                     FLRSPHAHAKINSISVPPATRGKVFTAADLPRIRPIRVVTQSAGAKSPPWPPLATDKV
                     RYVGEAIAACVAPTRAEAEDLAAAITVDYVPLAAVVQAQTERASSPDLVHEYFGDNLF
                     QERTLVGGDIDAAARAAEVTISREYRMNRQSGAPMECRGILACRDHRLDEVVVYASTQ
                     TPHTIRVALGEILGLEERCIRVVAPDVGGGFGPKARLYPEEIILTALALELDHPVRWI
                     EDRNEHLLTGAHTRDHHYKVTAYADRAGKILGIDCEITVDAGAYGMWPQGPYQEANMA
                     ARTLPGPYAISNYRARIYTVATNKAPIGPYRGVGRPGACFAMERTIDEVARAVGRDPV
                     AVRIENMIPPAQMPYASVTGMLYDTGDYAASVRLCADLLNLSSIRERQQLGEPDGRFI
                     GIGFASFTEQTAHGAAEFASRGASIIPGFESCRAQILTDGSVVLMVGIQSHGQGLETA
                     LSQIACQELGIDPARISVRHGDTESTAFGFGTFASRSMVMSGGAVARASRILRDKLCQ
                     IGAFLLQCDVAEVRCEDGAVHGPKGSVTVAEIAKIAHLRMHELPPGVPPLLDVTTTYE
                     PGMSTGVYSYATHGAVVAVDPETGAIELLDFAVAEDCGTMVNPMLVEGQIRGGVVQGI
                     GTALHEEIPYDLQGQPLAATFLDYHMPGAHELPAITIGHLHTPATATEYGMKGMGEGG
                     AVAPPAAVANAVRDALASLGVEVNETPMTSQRVLAAITKM"
     gene            3026..>3575
                     /locus_tag="VHX39_15300"
     CDS             3026..>3575
                     /locus_tag="VHX39_15300"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3992534.1"
                     /translation="MRNKLHWVHCCAAFVVVALVSFAANAETKTFRWSNDGDATTMDP
                     HARSDGFVTSFDMNMYEPLVRRDRNLKLEPGIATEWSSTGPTTWRFLLRHDVKFHDGT
                     PLTADDVVFSMQRAIATGADVAALLTTVKEVRKIDDYTVDFVTDGPSPILPNYLYGVA
                     IMSKAWCEAHDTTNAASHEDKEN"
BASE COUNT          693 a         1113 c         1073 g          696 t
ORIGIN      
        1 cactcaaacc tgcgcgaccg tcatgcccgc gttgcgaacc gttgccggcg ggcaactcgc
       61 tgcatgtcat tatccgattg tcaacactgt ggcagaagca accccgctgg taccagtggc
      121 ttataccagc gcgcctacac gctgacacac gaatggaatg ccagcgtctc aactacatct
      181 ttgtgatcgc agcaagcact cgctgcgacg tcatcggcgt ctcgttcact tccacaccca
      241 ggctcgccaa tgcgtcccgc acagcattgg caaccgcagc aggcggagca acggcgccgc
      301 cttcccccat ccccttcatc ccgtattcag ttgccgtcgc tggcgtgtgc agatgtccga
      361 tcgtgatcgc cggtaattca tgcgcaccgg gcatatggta atcgagaaac gttgcggcga
      421 gcggttggcc ttgcaggtca taggggatct cctcatgcaa cgccgtgccg atcccttgca
      481 ccacgccgcc gcggatctga ccctcgacaa gcatcgggtt gaccatcgtt ccacaatctt
      541 cagcaacggc gaagtccaac aattcgatcg ccccggtctc cggatcgacc gccacgacag
      601 cgccgtgcgt cgcataggag taaacgcccg tactcatgcc cggctcatag gttgtggtta
      661 cgtccagcag cggcggaacg ccgggtggca actcgtgcat ccgcagatgt gcgattttag
      721 caatttcagc caccgtcacg gagccctttg gcccatgcac tgcgccatct tcacaacgca
      781 cctcggccac atcgcattgc agcaggaatg caccgatctg acacagtttg tcgcgcagaa
      841 tacggctggc gcgagccacc gctccaccgg acatgaccat gctgcgcgaa gcgaatgtgc
      901 caaagccaaa ggccgtgctt tcggtatcgc cgtgccgcac cgagatgcgc gccggatcaa
      961 tccccagttc ctgacaggcg atctgcgaca gggcggtttc cagtccctgg ccatgcgact
     1021 ggatgccgac catcagcacg acactgccgt ccgtcaggat ctgtgcgcgg cagctttcga
     1081 aaccagggat aatcgaggcg ccgcgcgagg caaattcggc agcgccatgc gcggtctgct
     1141 cggtaaagct ggcgaagccg attccgatga atcgtccgtc cggctcgccc agttgttggc
     1201 gttcgcggat ggaggagagg ttcagtaagt cggcgcagag ccgcacactg gccgcgtagt
     1261 caccggtatc gtagagcatg ccggtcaccg aggcgtacgg catctgcgca ggcgggatca
     1321 tgttctcgat acgcaccgct accgggtctc ggccaaccgc acgggccacc tcgtcgatcg
     1381 tccgctccat cgcgaagcag gcccctgggc ggccgacccc gcgatatgga ccgatcggcg
     1441 ccttgttggt cgcaaccgtg tagatgcggg cgcgatagtt cgagatcgcg taggggcccg
     1501 gcagagtgcg cgccgccata ttggcttcct gatacggacc ttgcggccac attccatagg
     1561 cgccggcatc gacggttatc tcgcaatcga tgccgaggat tttgcccgcc cggtcggcat
     1621 aagccgtcac tttgtaatga tggtcgcggg tatgcgcccc ggtcagcaaa tgttcattgc
     1681 ggtcctcgat ccaacgcacc ggatgatcga gttccaacgc gagcgcggta aggatgatct
     1741 cttcaggata cagccgtgct ttgggcccga agccgccgcc gacatcgggc gcgacgaccc
     1801 ggatgcagcg ctcctccaga ccgaggattt cgccaagcgc gacacggatt gtgtgcggcg
     1861 tctgggtcga ggcatagacc acgacctcat cgagccggtg gtcgcgacag gcgaggatgc
     1921 cgcgacattc catcggcgcg ccggactgcc ggttcatgcg atattcgcga cttatggtga
     1981 cctcggcggc gcgcgctgcg gcatcgatgt cgccgcccac gagcgtccgc tcctgaaaca
     2041 ggttatcgcc gaaatattcg tgtaccaaat ccgggctgct ggcgcgctcg gtctgggctt
     2101 gcaccaccgc ggcaagcggc acgtagtcga cggtgatggc ggcggcgagg tcctcggctt
     2161 cggcgcgggt cggcgcaacg caggcagcga tcgcctcgcc gacatagcgc accttgtcgg
     2221 ttgcaagcgg cggccagggc ggtgatttgg caccggccga ctgcgtcacc actcggatcg
     2281 gtctgatccg cggcaggtcg gcggctgtga ataccttgcc tcgtgtggct ggtgggacgg
     2341 agatcgaatt gattttcgca tgggcgtgcg ggctgcgcag gaacaccacc tcctgggttc
     2401 cgcgcaatgt gatgtctgcg acgaattgtg cgcggcctcg caggtggcga tcatcctctt
     2461 tgcgtagcat tgaggcaccg acaccgcggg ctcgaactga gtgctcctgc gccatggtcg
     2521 cctccctgaa tttcccctgg gcctgcggtt taccttcccg cgaaagggca ttgcagaatg
     2581 atgcgccgtt gagcgcctga cgacaaccgt gcaggtgcga gcattgtgac cagaagggcg
     2641 aaaaaacaaa caacgtgacc agatcggtga tcttcaaccc ggcttctttg tgatcgaacc
     2701 tgaattcttt tagagcacgt tagtgaatta tcatcgattg agcggcaatg tcaggcacaa
     2761 tgcctgaatt tccatcttag tttggctgtt ttataatcag acatgagaag gtgggacttt
     2821 cgcgcaaaac ctgttgctga agccggagtt atttccggca caccagcagg cctggcgtcg
     2881 tccgcgcagc acagcagcgt gccacgtccg atgaggatgc gggttgcact ccgctaattt
     2941 tattcccgcg aaatcgtgag acgccgagcc gctggcacga gacttgctcc cattgcctca
     3001 acccggaaat ggcaggtggc tcgtgatgag aaacaagctt cattgggttc actgttgcgc
     3061 cgccttcgtg gttgtggcgc tggtctcttt cgcggcaaac gccgagacca aaacctttcg
     3121 gtggtcaaac gacggcgacg ccacgacgat ggatccacat gcgcgcagcg acgggttcgt
     3181 cacgtctttc gacatgaata tgtacgagcc gttggtgcgc cgcgaccgga atctgaaact
     3241 ggagcccgga attgcgaccg agtggtctag taccggcccc acgacgtggc gcttcctgtt
     3301 gcgccatgac gtaaaattcc atgacgggac gccgctcacc gccgacgacg tcgtgttttc
     3361 catgcagcgc gcgatcgcga ccggggccga tgtcgcagcg ctgctgacca cggtcaaaga
     3421 ggtcagaaaa atcgacgatt atactgtcga cttcgtcacc gacggacctt cgccgatcct
     3481 gccgaactac ctttacggcg tcgcgatcat gagcaaggcg tggtgcgagg cgcacgatac
     3541 gacaaacgcc gcgtcccatg aggacaaaga gaact
//
LOCUS       DATAVD010000800         2188 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2307195, whole genome shotgun sequence.
ACCESSION   DATAVD010000800 DATAVD010000000
VERSION     DATAVD010000800.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2188
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2307195"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1127)
                     /locus_tag="VHX39_15305"
     CDS             complement(<1..1127)
                     /locus_tag="VHX39_15305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011253244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease H3TH domain-containing
                     protein"
                     /protein_id="HEX3992535.1"
                     /translation="MVLIDGSGFIFRAFHALPPMTRPDGTPVNAVFGFTNMLARLLKD
                     HTGTHIAVIFDAGRYTFRNRLYEAYKAHRPPAPEELIPQFILTREATEAFGVPAIELT
                     DWEADDLIAAYAKAAEEQRWRTTIVSSDKDLMQLIRPGVIMLDPLKQKPIGPAEVMEK
                     FGVTPDKVIEVQSLIGDSTDNVPGVPGIGPKGAAQLIAEYGNLEAVLAAAPGMKPSKR
                     RDMLIEHAEKARISRELVILRDDAPMPLALDALVVKEPDAVHLAAWLTAQGFRSTIAR
                     LGLAGAAQAAEAPKPADAPPVPASDVDFGNYESVTTVASLRIWADAARAAGCFALDTE
                     TDGLDAMRAGLVGLSMATAAGHACYVPLRHDILAEQVALTDA"
     gene            complement(1189..1371)
                     /locus_tag="VHX39_15310"
     CDS             complement(1189..1371)
                     /locus_tag="VHX39_15310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HEX3992536.1"
                     /translation="MSDGAALPPETFHVDDRTVACDGGPLGHPRVFLHIEDHEVVCPY
                     CSRVYILNEGGGHGGH"
     gene            1429..>2188
                     /locus_tag="VHX39_15315"
     CDS             1429..>2188
                     /locus_tag="VHX39_15315"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3992537.1"
                     /translation="MPRMRSTLLFLMAMAMLSLAACTSELAPPGPAVGPPVATSDAFV
                     MPDGFHLPYRVWLPSGPRPLAVVLALHGMNDSEDAWEIPAPYFAAAGVAIFSPDQRGF
                     GGSASRGYWPGTQGLVDDARVMARLLEQRYPGVPVYLMGESMGAAVLMVLATEPHAPH
                     VAGYVLVSPAVWGRAEMSPFLRGTLWLASHTVPGMLLENRGYVKITASDNHAALVRLS
                     EDPRTIHKTRVDATEGLVDLMDVALASAAQFHQRA"
BASE COUNT          360 a          705 c          741 g          382 t
ORIGIN      
        1 gcatcggtca acgcaacctg ctcggcgagg atgtcgtgac gcagcggcac ataacaggcg
       61 tggccggcag cggtcgccat cgacaggccg acgaggccgg ctcgcatcgc atccagccca
      121 tcggtctcgg tatccaacgc gaaacaaccg gcagcgcgcg cggcgtcagc ccagatacgc
      181 aacgacgcaa cagtggtgac cgactcgtaa tttccgaagt cgacgtccga ggcgggaacc
      241 ggcggcgcat ccgccggctt cggggcctcg gccgcctgcg ccgcacctgc caaacccaga
      301 cgagcaatcg tactccggaa tccctgggcg gtcagccagg ccgccagatg caccgcgtcc
      361 ggctccttca ccaccagcgc atccaacgcc agaggcattg gcgcatcatc ccgcaagatc
      421 acaagttcac gagaaattct cgctttctcg gcatgttcga tcagcatgtc gcggcgcttt
      481 gacggcttca tccccggcgc agcagccagc accgcttcca gattgccata ctcggcaatc
      541 aactgcgcgg cgcccttggg gccgattccc ggcacgcccg gaacgttgtc ggtcgagtcg
      601 ccgatcagcg actgcacctc gatcaccttg tccggcgtga cgccgaactt ttccatcacc
      661 tcggccggac cgatcggctt ctgcttcagc ggatccagca tgatcacgcc gggccggatc
      721 aactgcatca ggtccttgtc ggaggacacg attgtcgtgc gccaacgctg ctcctcggca
      781 gccttggcgt aggcggcgat cagatcgtcg gcctcccagt cggtcagttc gatggcgggg
      841 acgccgaacg cctcggtggc ttcgcgggtc aggatgaact gcgggatcag ttcctcgggg
      901 gccggcgggc ggtgagcttt gtaggcctcg taaagccggt tgcggaaagt gtagcggcca
      961 gcatcgaaga tcacggcgat gtgggtgccg gtgtgatctt tcaacaaccg cgcaagcatg
     1021 ttggtgaagc cgaacaccgc gttcaccggc gtgccatccg gccgcgtcat cggcggcagc
     1081 gcgtggaacg cgcggaaaat gaatccggaa ccgtcgatca gtaccagatg tttcccgggt
     1141 tcccctgccg tggtcgtcgg gggaaccgtt tggggatccc cgggggggtc aatgcccgcc
     1201 gtggccgcct ccttcgttca ggatgtagac gcgcgagcag tacgggcaca ccacctcatg
     1261 gtcctcgata tgcaggaaca cgcgcgggtg gccgagggga ccgccatcac aggcaaccgt
     1321 acgatcatcg acgtggaagg tctccggcgg gagagcggcg ccatccgaca tttgggtcct
     1381 cggtctggtg ggcaatggtc tggtgggcag tggggcggga tgatagcgat gccacgtatg
     1441 cgttcaacct tgctcttcct gatggcgatg gcaatgctgt cgctcgccgc ctgcacgagt
     1501 gaactggcgc cgccgggtcc tgccgtcggc ccgccggtag ccacctcgga tgccttcgtg
     1561 atgccggacg ggttccatct gccgtatcgg gtctggctgc catcggggcc tcgccccctg
     1621 gcggtggtgc tggcactgca cggcatgaac gacagcgagg atgcgtggga gatcccggcg
     1681 ccgtactttg ccgccgccgg ggtcgcgatc ttttcgccgg accagcgcgg ctttggcggc
     1741 tccgcctcgc gcgggtactg gccgggcacg cagggtctgg tggacgacgc gcgagtgatg
     1801 gccaggctgc tggagcagcg ctatccgggc gtgccggtct acctcatggg cgagagcatg
     1861 ggtgctgccg tgctgatggt gctggcaacc gagccgcacg cgccgcacgt ggcgggctat
     1921 gtgctggtct cgccggcggt gtgggggcgg gcggaaatga gccctttcct gcgcggcacg
     1981 ctgtggctgg cgtcccacac ggtcccgggc atgctgctgg aaaaccgcgg ctatgtgaaa
     2041 atcacggcga gcgacaatca tgcggcactg gtgcggttgt cggaggaccc tcggaccatc
     2101 cacaaaaccc gcgtcgatgc gaccgaggga cttgtggacc tgatggatgt ggcgctcgcc
     2161 tcggcagcgc agtttcacca gcgggcgc
//
LOCUS       DATAVD010000801         4021 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2681447, whole genome shotgun sequence.
ACCESSION   DATAVD010000801 DATAVD010000000
VERSION     DATAVD010000801.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4021
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2681447"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            392..1801
                     /locus_tag="VHX39_15320"
     CDS             392..1801
                     /locus_tag="VHX39_15320"
                     /inference="COORDINATES: protein motif:HMM:TIGR03025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03013 family XrtA/PEP-CTERM system
                     glycosyltransferase"
                     /protein_id="HEX3992538.1"
                     /translation="MNRLRLLQATMARSLFLIDVTLVALFWPVAWWLGRNEAVTADIR
                     GLFYPLSDLALLYAMGLYRREAFVAKHHSAAHVPMVVGMGVITSLLLQGLVSWLAPSI
                     VSSHVWRDDAMVAGLAFLCFTLCALVARAVLAILLRRRLLRRQLLVVGAGMRAWDLLQ
                     MLGKEGASLTYDMAFLHDPVLGSVDPRLAADPEGNVLYTERLHVLEAARQVSADQIVI
                     APDDRRGMDLEQLLACKKAGFPVVQYLGFVEHELRRVDIKRMDLGWLVFSDGFYFGAI
                     DRYLKRAFDLAVSVTMLIATAPLVLLGMLAIRLEASGPMFFRQERVTLDGHVFQILKL
                     RTMRVDAESDGAVWAARGDNRITRTGAILRRTRIDELPQLINILKGEMSFVGPRPERP
                     MFVEELAAQIPLYRERHMVKAGLTGWAQVNYPYGASVDDARSKLSYDLYYVKNFSILF
                     DFVILLQTLRVVLWPGGAR"
     gene            1865..2518
                     /locus_tag="VHX39_15325"
     CDS             1865..2518
                     /locus_tag="VHX39_15325"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX3992539.1"
                     /translation="MPIRAVCFDVGETLIDETREWNGWADFLGVPRLTLFTALGVSMW
                     RGQSHRTVFEIFRPDLDFSTVRQQRAAQGWRYGFEPSDLYPDARPCLTELRERGFKVL
                     IAGNQPKEAEQALHSLNLPVDFIASSAGWGVSKPDPGFFQRVIDAAGVAAESIAYVGD
                     RVDNDVIPARAAGMMAVFLRRGPWGWMHEERPGIEQAHLRLRNLHGLADLLSSDDAA"
     gene            2639..3757
                     /locus_tag="VHX39_15330"
     CDS             2639..3757
                     /locus_tag="VHX39_15330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008642587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX3992540.1"
                     /translation="MGPLAGVKIVEFTGIGPAPMAAMMLADMGATIIRIDRTGPTDLG
                     VPMPEQFEFTKRSRAVIGLDLKQPDAVQLALRLIDSADALIEGFRPGVMERLGLGPDI
                     CLKRNPKLAYGRVTGWGQTGPLAQAAGHDLNYIALTGALHAIGRKGQKPTPPLNLVGD
                     YGGGALYLVTGLLAAIISARATGTGQVVDAAMVDGALSLMTPIYAMKAGGRLTAPRGE
                     NQLDSGAYFYEVYECSDGQYICIASIEAKFHAELLQRLEIDPATMSQRDRSKWPDAKD
                     RLTALFKTRTRDGWCHVLEGTDVCFAPVLSMDEAHQHPHNTARAAFIDVGGMRQPAPA
                     PRFGTTTLAHPAPPGSVDPRETLRAWGLSSAELAALPI"
     gene            3841..>4021
                     /locus_tag="VHX39_15335"
     CDS             3841..>4021
                     /locus_tag="VHX39_15335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010669274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992541.1"
                     /translation="MGHVSQIARRCEAAVVTAYSELRQHGTDDMAAFVACTTLYRIHH
                     PEASLNEARRLVAEWV"
BASE COUNT          727 a         1114 c         1307 g          873 t
ORIGIN      
        1 tccggcaacg accatgcaga ccgtcggcaa tgccgtggct ctcgcgctca aggcattgct
       61 ggcgatggat ggcgcaaccc tgaaagcgcg gcggcgtgag aaatttctgg aaatgggccg
      121 cgaaacgatc agctgatcgg catttcagcc gagcctgtcg tgccgggttt ccggtcggca
      181 ccctgacacg atcggacggt cgcggttttg ccgccgggat cgttctgccc gacgtggcat
      241 gtcgcgacac cagggggtgg caaaacgaga ttgaccccaa tgccgatccg atgctcaagc
      301 tgtaactgtc ggtgagccaa aaaagctgac caggcgcccg cgcggggtct ctacgggaga
      361 ccgcggcacg gagacggatt caggacatgg catgaatcgc cttagacttc tgcaggccac
      421 gatggcacgg agcctgttcc tgatcgatgt aacgctcgtg gcgttgtttt ggccggttgc
      481 ctggtggctc gggcgaaacg aagcagtcac cgcggacatc cgtggcctgt tctatccgct
      541 ctcggatctg gccctacttt acgcgatggg cttgtaccgg cgcgaggcgt ttgttgcaaa
      601 gcaccattcg gcggcacacg tgccgatggt tgttggcatg ggtgtgatta cgtcgctgct
      661 gttgcagggg cttgtctcgt ggctggcgcc ttcgatcgtt tccagccacg tctggcgaga
      721 tgacgcaatg gtcgccggcc tggctttcct gtgcttcacg ctgtgcgcgc tcgtggcacg
      781 ggcggtgctg gccatattgc tgcggcgccg attattgcgc cgccagctgt tggtggtcgg
      841 cgccggcatg cgggcgtggg atttgttaca gatgctcggc aaggaaggcg ccagcctgac
      901 ctacgatatg gccttcctgc atgatcctgt actgggctcc gtcgatccgc gtctggccgc
      961 cgacccggag ggaaatgttc tttatacgga acgacttcac gtgctggagg ccgcacgtca
     1021 ggtctctgcc gatcagatcg tcattgcacc ggatgaccgt cgcggcatgg atctcgagca
     1081 attgctggcc tgcaaaaagg ccggatttcc tgtcgtgcag tatcttggct tcgtggaaca
     1141 tgaattgcgc cgggtcgata tcaagcggat ggacctcggc tggctggtgt tctcggatgg
     1201 tttttatttc ggagcgatcg atcggtatct gaaacgggca ttcgatctcg ccgtcagtgt
     1261 aaccatgctg atcgcgactg ctccgctggt gctgttgggt atgcttgcca ttcgtttgga
     1321 agcaagtggg ccgatgtttt ttcggcagga acgtgtcacg ttggacggtc acgtctttca
     1381 gatccttaaa ctgcggacaa tgcgtgtcga cgccgagtct gatggtgccg tttgggctgc
     1441 cagaggagac aatcggatca ctcggaccgg tgcgatactc cgccgcacgc gaatcgacga
     1501 acttccgcag ctgatcaaca ttctaaaggg cgagatgtcg tttgtcggac ccagacccga
     1561 gcggccaatg ttcgtcgaag aactggccgc acagatcccc ttgtatcgcg agcggcacat
     1621 ggtgaaagca ggcctcaccg gatgggcgca ggtgaactat ccctatggcg cctcggttga
     1681 cgatgcgcgg tcgaaactca gttatgatct ttactatgta aagaatttct cgatcttgtt
     1741 cgactttgtc attctgttgc aaaccctgcg ggtcgtgttg tggccaggcg gtgcgcgctg
     1801 aataccgtcg gccggagaaa accggtaatg tggtggctcc agcataatcg gatgaccctg
     1861 aatcatgcct atccgtgcgg tctgctttga cgttggtgaa accctgatcg atgagaccag
     1921 ggaatggaac gggtgggccg actttctcgg tgtcccgcga ctgacgctgt tcaccgctct
     1981 gggcgtcagc atgtggcgtg gccagtcgca ccggactgtc ttcgaaatct ttcgtcccga
     2041 cctggacttt tccactgtgc gacagcagcg cgcggcccag ggctggcgtt atggcttcga
     2101 gccatcagat ctgtatcccg acgctcggcc gtgcctgacc gagttaaggg aacgcggctt
     2161 caaagtgctg atcgccggca accagccgaa ggaggcggag caggccttgc acagcctgaa
     2221 tctgccggtg gatttcattg cgtcctcagc gggatggggc gtgtcgaaac ctgaccccgg
     2281 gtttttccag agggtgattg acgcagccgg agtagcagcg gaaagcatcg cctatgttgg
     2341 cgatcgggtt gataacgatg tcatcccggc tcgggcggcg ggcatgatgg cggtgtttct
     2401 gcggcgtggc ccctggggct ggatgcatga agaacgccca gggatcgaac aggcacattt
     2461 gcgattgcgt aacttgcacg ggctggcgga cctgctgtcg agtgacgatg ccgcatgatc
     2521 caattcgagg tttgtatcgg tcttggaacc gtctgagaac cgtcccgaga ccgggttcgc
     2581 aaggttgccg atgcgcgttt gcgcggcaac aatggcacgg ataacggagg ataccgacat
     2641 gggacccttg gcaggggtaa aaatcgtcga atttaccggt attggcccag cgccgatggc
     2701 ggcgatgatg ttggccgata tgggggcgac gattattcgt atcgatcgga ccggtcccac
     2761 ggatcttggc gttccgatgc cggagcaatt tgaattcacc aagcgcagcc gggcggtgat
     2821 cgggctcgat ctgaagcaac cggacgccgt gcaactggcg ctgcggctga tcgatagtgc
     2881 cgatgctttg atcgagggat tccggccagg ggttatggag cgtctgggcc ttggcccgga
     2941 tatttgtttg aagcgcaatc cgaagctcgc ttacggccgg gtgaccggct ggggtcagac
     3001 aggcccgctc gcgcaggctg ccggtcacga cctgaactac atcgcgctga ccggagccct
     3061 gcatgcgatc ggccggaagg ggcaaaagcc gacgccgccg ctcaatttgg tcggcgatta
     3121 tggcggcggc gctctgtatt tggtcaccgg cctgctggcc gcaatcatct cggcgcgcgc
     3181 caccggtacc gggcaggtgg tcgatgccgc gatggtcgac ggtgctttgt cgttaatgac
     3241 gccgatctac gcgatgaagg cgggtggacg gttgactgcg ccacgcggcg aaaaccaact
     3301 tgattccggc gcgtatttct atgaagtgta cgagtgttcg gacggccaat atatttgcat
     3361 cgcctcgatc gaggcgaaat tccacgccga attgttgcag cgtctggaga tcgatccggc
     3421 aacaatgtcg caacgggacc gctcgaagtg gcccgatgcg aaggaccgcc tgacggcctt
     3481 gttcaagacc cggacccgcg atggttggtg ccacgttctg gaagggaccg atgtttgttt
     3541 cgcgcctgtg ctgtcgatgg atgaggcgca tcagcatccg cacaacaccg cacgggctgc
     3601 gttcatcgat gttggtggca tgcggcaacc cgctcccgca cccagatttg gcacgacgac
     3661 gctggcgcat ccggcgccgc ccgggtcggt cgatccacgc gaaaccttgc gcgcctgggg
     3721 cctgtcgagc gcagagctgg ctgcattgcc gatctgatcg tgacgcactt gtgacgggtc
     3781 ttcggtgccg ttatcctgag gtctggttgc gaatgattcg caatcaggag acatccaaga
     3841 atgggtcacg tcagccagat tgctcgccgt tgtgaggcag ccgtggtcac cgcgtattcc
     3901 gaattacgcc agcacggcac ggatgacatg gccgcgtttg tcgcgtgcac cacgctgtac
     3961 cgtatccacc atccggaagc gtcactaaac gaagcgcggc gtctggtggc tgagtgggtt
     4021 g
//
LOCUS       DATAVD010000802         9013 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3426412, whole genome shotgun sequence.
ACCESSION   DATAVD010000802 DATAVD010000000
VERSION     DATAVD010000802.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9013
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3426412"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1112
                     /locus_tag="VHX39_15340"
     CDS             <1..1112
                     /locus_tag="VHX39_15340"
                     /inference="COORDINATES: protein motif:HMM:NF016992.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HEX3992542.1"
                     /translation="TLNNVLMLGALLSWWIEQMRDLVAPLGQRASTRSKDALVLAYDG
                     QGSCRIARRHNGKSTHLATLAADATEAAWRHAFASRRRREPVVVTLDQPFLVRRTTFP
                     LVAAADLDQLLHYEMDRLTPFAAADVLYSHRIVARDTAAGTLAVDIAVVPKAWVRDPL
                     QRLAALSIRPEALEASTGEFPTDLTPSGEWPARPGSSNANRAITRILLDHDDPAHRAR
                     VRLGWRAAIGTSMALAAAVVAVPLIRQSLALADVDARIAALRPHMDQVDALRRQIAAG
                     SAGAGQIAAARERGTVALRALGILTDLMPDDTYLTSVALRHNQLTIEGHSTAATKLIA
                     AMTADPQLKNPAFGAPVVRAENGTDIFTIQAGFGS"
     gene            1115..1714
                     /gene="gspM"
                     /locus_tag="VHX39_15345"
     CDS             1115..1714
                     /gene="gspM"
                     /locus_tag="VHX39_15345"
                     /inference="COORDINATES: protein motif:HMM:NF040576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspM"
                     /protein_id="HEX3992543.1"
                     /translation="MALALPTGTRGQMLALGLTLLAAAVIWIGAIAPVWGWYDDRAEL
                     LRRQNAIAHRMASLVESLPALRRQVATIAGDATSSGGVNNDTAVLLTGTSDPVAAASL
                     QQRIEDLATQAGVRVGSEEILPGQAEGDLRAIAVRLTLTAPFRSLVAMLLALSRSETP
                     MVVDELLLRGPPARPGENDLPVDVSLTVTSYRSAKAATQ"
     gene            1711..2271
                     /locus_tag="VHX39_15350"
     CDS             1711..2271
                     /locus_tag="VHX39_15350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992544.1"
                     /translation="MRRVVALCCLIVVLGFVLTWELATSEDSAASVDAAVPAGPVQNA
                     RDDAGKSAAHAFDAESLADIAASIVQRPLFSPTRRPSANGPDKSAGQAVGQAEVPRLT
                     GVIIGPTGGWAIFAGADGKSHAAAPGDVIGAFKVRAISPGVVTLTGSEGDRVVRPTYL
                     NPPGVASAEIAAPITPVGNRNRDGRR"
     gene            2276..4582
                     /gene="gspD"
                     /locus_tag="VHX39_15355"
     CDS             2276..4582
                     /gene="gspD"
                     /locus_tag="VHX39_15355"
                     /inference="COORDINATES: protein motif:HMM:TIGR02517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system secretin GspD"
                     /protein_id="HEX3992545.1"
                     /translation="MIFRHSIAGLVILATLASCEKSEPVALQPLPVPLGNQVASARLN
                     GRIYTPPPLPTRISYGAVRRGADGSATPYGAAQYSLDFADTDVREAVAQILGTMLGLN
                     YSIDPAVKGTVTLRTAHPLTAGQLMPALETILGSVGAALVRADGLYRVVPAATAGGAG
                     ALVVPLNYVSADDLAKVLQPLAGANAKVAAEPDLNMLLISGDPGQVQSLTALVRGFDT
                     DALAGQSYAVMPVASGNAKDFADAMTDAFHGKAGSSLGGLVRVVPLPRMNALLVVSPQ
                     PSYIEAARRVFNVIESQRRTTVRVWHAFFLQNSNANDIAYTLQMAFTPNNVTAVPQAA
                     MQGNGSGAGGYAARAGIGSGMTAGMGGGLASGGLGAGASGAGGLGAGGVGAGGISSLG
                     GANPLAPSTGQGGANLPPSVATPTANPLLGGLEQPTSQGGETENTMRILPNAQNNAVL
                     VFGTEQEDETVAAMLRKIDITPMQVRIDATIAEVTLNDNLQYGTQFFFKSGGINGILN
                     NATAAVTAVSNTVLGTSFPGFLISGSGQGGAPFAISALQAVTKVNVLSSPQITVVDNQ
                     PARLQVGALVPYLTASSQSTLTANAPVINSIAYQPTGVIMEVTPRVNSGGQVTLDISQ
                     EVSEVDNTPNTTGINSPTFNERSVTSRVVVQDGQTIGLAGLIQDNTSKGNQGIPWLKD
                     VPVLGALAGTQTNTRQRTELLVLLTPHVIRDQSDARALTEDLRTALPAAAQVPVLSRT
                     ERLSGSTDPNGRIRDRLERAIRRDTAPQ"
     gene            complement(4629..5078)
                     /locus_tag="VHX39_15360"
     CDS             complement(4629..5078)
                     /locus_tag="VHX39_15360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEX3992546.1"
                     /translation="MAIPFLACMVAAASFYHLPPRVLPSIQMVEGGKPGTISRNTDGS
                     ADLGVMQVNTLWVPQFAAITGMTEDAVRARLIVDPCFNIAAAGAIMRVYLDEAGGDLL
                     RAVGYYHSHTPERASEYQVKVLSAATRLFVKPTPPAAPAAITPADYP"
     gene            complement(5439..6065)
                     /locus_tag="VHX39_15365"
     CDS             complement(5439..6065)
                     /locus_tag="VHX39_15365"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEX3992547.1"
                     /translation="MTHTARRCSANCCAGFTLIEVLAALAVLGLILAGLSAGVRFGQQ
                     ALLSQARDTTAANQVGPVDETLRSLVAQAWPGAAGAEARFAGTARVLSFRTMMPESLT
                     ATRTRDADVTIGVDPEHRLYLAWLPWYRNWIVPKPAAARIDLLANVDHVEFAYWDPTL
                     HLPPGGWATAWVGTSVPKLLRIRLVFTKDAGLRWPDIIVATARDPWSY"
     gene            complement(6082..6501)
                     /gene="gspG"
                     /locus_tag="VHX39_15370"
     CDS             complement(6082..6501)
                     /gene="gspG"
                     /locus_tag="VHX39_15370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system major pseudopilin GspG"
                     /protein_id="HEX3992548.1"
                     /translation="MTKTREHDQRGFTLLEILVVIAILGLLIGLVAPAALRQLGFARV
                     SVAKQSIERIGSVLDMYKLDVGTYPDSEQGLRALVERPTGVEAWNGPYLKGGVPVDPW
                     NHPYTYRNPSPRSGHDYDLCSAGPPTSTASTDAICNP"
     gene            6710..7534
                     /locus_tag="VHX39_15375"
     CDS             6710..7534
                     /locus_tag="VHX39_15375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEX3992549.1"
                     /translation="MDVIASLSSGVMGWLAPILVAPFIGSFLGVLIVRLPEGKPVAMA
                     RSACDHCGHRLGSRDLIPFVSYLVSRGRCRYCGEAIGSFPFLIELAALAVAVWAVTAV
                     DDAPWVACLFGWTLLTLAWIDLRSMILPDVLTLPLLALGLATTGMTRPDALAEHLLAA
                     ALGYLTLAAVAWAYRRFRGRDGLGMGDAKLLAAIGAWLGLSLLPVALLLAACAGLVAA
                     AGAALTGKRMTAATAIPFGPFLALSGWLLWLYADRVADWLMDGSLGPVLSGWLMGG"
     gene            8125..8637
                     /locus_tag="VHX39_15380"
     CDS             8125..8637
                     /locus_tag="VHX39_15380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992550.1"
                     /translation="MVARAWIGGGNNQASNPKDWSPVGVPQVGDTLFVMEGAATYTMN
                     VSADDLVGDSLTVERAEPPYALTANLSHHAIMNVEVGYGGTGTFNLSQGSTLNLRADY
                     GGDTIVNVSGSDTLIINDLAVASQGGGDPEINLASGAVWRGTFDTYAIQFDIRTTDTG
                     RKSRSEFHRQ"
     gene            complement(8617..>9013)
                     /locus_tag="VHX39_15385"
     CDS             complement(8617..>9013)
                     /locus_tag="VHX39_15385"
                     /inference="COORDINATES: protein motif:HMM:NF021497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lipid A-modifier LpxR family protein"
                     /protein_id="HEX3992551.1"
                     /translation="LTVGAGTFRIYSQAGVQFRIGRGLKSDFGAPRMQPGLTGTDAYA
                     QTVPFAWYFFAGVDGQAVAWDETLDGEPFVNSRHVSRIPLVGEFQAGFAVMYHGVRLT
                     VAHVIQSNEFRGQTNGTFQFTSGSLSMKF"
BASE COUNT         1689 a         2669 c         2893 g         1762 t
ORIGIN      
        1 aaacgttaaa caacgtgcta atgttgggtg cgctactttc ctggtggatt gagcagatgc
       61 gcgacctggt cgcgccattg ggccaacgtg cgtccacccg gtcgaaagat gcactggtgt
      121 tggcttatga tgggcaagga agctgccgta ttgcccgacg gcacaacggc aaatccaccc
      181 atctcgcaac ccttgccgcc gatgccaccg aagcggcctg gcgccatgcg tttgcgtcac
      241 gccgccggcg tgaaccggtc gtggtcacgt tggaccaacc gtttttggtg cggcgaacga
      301 cgtttccgct cgtggccgcg gccgacctcg accaactgct gcactatgaa atggatcgcc
      361 tgacaccgtt cgccgcggca gatgtcctgt attcccatcg tatcgtggcg cgggataccg
      421 cagccggaac attggccgtg gatattgcgg tcgtacccaa ggcctgggtg cgggatccgc
      481 tgcagcggct cgcagctctg tcgatccgtc ccgaggcgct ggaggcgtcg acaggcgaat
      541 tcccaacaga tttaacgccc tccggcgaat ggccggcgcg accagggtcg tccaatgcca
      601 atcgtgccat cacacgcatt ctgctggatc atgacgatcc ggcgcaccgt gcccgcgttc
      661 gtcttggctg gcgcgccgct ataggcacat ccatggcact cgcggccgca gtggttgcgg
      721 tgccgctgat ccgccagtcg ttggccttgg cggatgtgga tgcgcgaatt gccgcgctgc
      781 gtcctcacat ggaccaggtg gacgcactgc ggcgccagat tgcggcgggg tcggcaggcg
      841 cgggtcaaat tgcagcagcg cgggagcgcg gcaccgtcgc cttgcgcgcg cttggcattc
      901 ttaccgatct gatgcctgac gatacgtatc tgaccagtgt tgcactgcgt cataatcagt
      961 tgaccattga ggggcactcg accgcggcga ccaaactgat cgcggcgatg accgctgacc
     1021 cgcaactgaa aaatccagcg ttcggcgcgc cggtggtgcg ggcggaaaac ggcacggaca
     1081 tcttcaccat ccaggctggg tttggatcct gaccatggcg ctcgcattgc ccaccggtac
     1141 acggggtcag atgctcgcgt tgggcctgac gcttttggcc gccgcagtca tctggattgg
     1201 cgccatcgcc cctgtctggg gctggtacga cgatcgggct gagttgctgc ggcgccagaa
     1261 cgcgattgcg catcgtatgg cgtcgctcgt tgagtcgctg ccggcattgc gccgtcaggt
     1321 tgcaaccatc gccggtgacg cgacatcgtc cggcggagtg aacaacgata ccgccgtcct
     1381 gctgaccggc acgagcgatc cggtcgcggc ggcatcgctg cagcaacgta tcgaagacct
     1441 cgcgacgcag gctggcgtac gggtcggcag cgaggagatt ttgcccggcc aggccgaggg
     1501 agatttgcgc gccatcgccg tccggctgac cttgactgcg ccgtttcgct cgctggtggc
     1561 aatgctgctg gctctgtcgc ggtccgagac tccgatggtc gtggacgaat tgctgctgcg
     1621 tggtccgccc gccaggcccg gcgagaacga cctgccggtc gatgtaagcc tgaccgtgac
     1681 ttcctatcgt tccgcgaagg ccgcgaccca atgagacgcg tggtcgcgct ctgctgtctc
     1741 atcgtcgtac tgggctttgt cctgacgtgg gaactcgcga catcggagga tagcgctgca
     1801 tcggtggatg ccgctgttcc cgccggtccg gtgcagaatg ccagagacga tgccggcaag
     1861 tctgccgcgc acgcgttcga cgcggaatca cttgccgaca ttgcggcgtc catcgttcag
     1921 cgcccgttgt tcagcccgac gcgccggccg tctgccaacg gtcccgacaa atccgcgggg
     1981 caggcagttg gtcaggcaga ggtgcctcgg ttgaccggcg tgatcattgg gccgaccggc
     2041 gggtgggcga tcttcgctgg cgcagacggc aagtcacatg cagcggcccc cggcgatgtc
     2101 attggtgcct tcaaggtgcg ggcgataagc ccaggagtcg taacgctgac aggatcggag
     2161 ggagatcgtg tggtgcgtcc cacttactta aatccgccag gtgtcgcctc cgccgagatc
     2221 gcagccccta tcacacccgt tggcaatcgc aaccgagacg gcaggcggtg aactcatgat
     2281 atttcgtcac tcgatcgccg ggcttgttat tcttgccact ctggcaagct gcgaaaagtc
     2341 cgagccggtg gcgcttcagc cgctgccggt cccacttggc aaccaggttg cctcggcgag
     2401 gttgaacggg cgcatctata ccccgccgcc gctaccgacg cggatctctt atggcgcggt
     2461 cagaaggggc gccgatggga gtgccacgcc atacggcgca gcgcagtact cgctcgattt
     2521 tgccgacacc gacgttcgcg aggcggtggc ccaaatcctc ggtaccatgt tgggcctgaa
     2581 ctattcgatc gaccctgccg tgaaaggcac ggttaccctg cgcaccgccc atccgttgac
     2641 cgctggacag ttgatgcctg cgttggagac cattctgggc agcgttggag ccgccctggt
     2701 tcgcgccgac ggattatatc gcgtggtgcc cgctgcaacg gcgggcggtg ccggcgccct
     2761 tgtcgtgccg ttgaattacg tttcggccga cgatctggcg aaggtgctgc aaccgctggc
     2821 cggggccaac gcgaaggtcg ccgcggagcc ggatctgaat atgttgctga tcagtggcga
     2881 ccccggccag gtgcaatctc tgactgcgct ggtccgaggc ttcgacaccg atgcgttggc
     2941 gggacagtcc tacgccgtga tgccggttgc ctccggcaac gccaaagatt tcgctgacgc
     3001 aatgacagat gcgttccatg gcaaagccgg ctccagcctc ggcgggttgg tgcgcgtggt
     3061 gccgctgccc cgaatgaatg ccctgctcgt ggtatcgccg cagccgagtt acattgaggc
     3121 cgcgcgacgg gttttcaacg tgatcgagag ccaaaggcgc accacagtgc gagtctggca
     3181 cgcgtttttc ctgcagaaca gcaacgcgaa cgacatcgcc tatacgctgc aaatggcctt
     3241 cacgccgaac aatgtcacag cggtgccgca ggcagcgatg caagggaacg gaagcggcgc
     3301 cggcggatac gcagcgcgcg ccgggatcgg atcgggcatg actgcgggca tgggcggagg
     3361 cctggcttcg ggcggtctgg gggcgggagc gagcggggcg ggcggcctcg gggcaggagg
     3421 cgtcggcgca ggcggaatta gttctctggg cggcgccaat ccgttggcgc catcgacggg
     3481 tcaggggggc gctaatctcc cgccgtcggt cgcgacgccg acggcaaatc cgttacttgg
     3541 cggcctcgaa cagcccacgt cgcaaggcgg cgagaccgag aataccatgc gtattctgcc
     3601 gaacgcccag aacaacgccg ttttggtctt tggcaccgag caagaggatg aaaccgtcgc
     3661 ggcgatgctg cgcaagatcg atatcacacc gatgcaagtg cggatcgatg ccaccattgc
     3721 cgaggtcacg ctgaacgaca acctgcaata tggcacgcag ttcttcttca aatccggcgg
     3781 catcaacggg attttgaaca atgccacagc cgccgtgacg gcggtgtcga atactgtgct
     3841 cgggacgagt tttccgggtt tcctgatcag tggcagcggt cagggtggcg cgcccttcgc
     3901 aatttccgcc ttgcaggcgg tcaccaaagt gaacgtcttg tcgtcgccgc agattaccgt
     3961 ggtggacaac cagccggcac gcctgcaggt cggcgcgctg gtgccctatt tgacggcaag
     4021 ctcgcaaagc acgctgacgg ccaatgcgcc ggtgatcaat tcgattgcat atcaaccgac
     4081 cggcgtgatc atggaagtaa ctccgcgggt caacagcggc ggtcaggtca cgctggatat
     4141 cagccaggag gtcagcgagg tcgataacac gcccaatacc actggcatca acagtcccac
     4201 cttcaatgag cgaagcgtca cgtctcgcgt tgtcgtgcag gacggtcaga ccatcggcct
     4261 cgccgggttg atccaggaca acaccagtaa aggcaaccag ggcattccgt ggctgaaaga
     4321 cgttccggtg cttggcgcac tcgcgggcac gcaaaccaac acgcgccagc gcacggaatt
     4381 gctggttctg ctgacgccgc atgtgatccg cgaccaaagc gatgcgcgtg ctctgaccga
     4441 agatttgcga acggcgctgc cggccgcggc gcaggtgccg gttttgtcga ggaccgagag
     4501 attgtcgggg tcgaccgatc ccaatggccg gatccgcgat cggcttgagc gtgcgattcg
     4561 ccgtgatacg gcaccgcaat gattgggtat ggatgcacct gccgccggca ggcctgctgc
     4621 gtacgggatc aaggataatc cgctggcgtg atggcggccg gtgccgccgg tggtgttggt
     4681 ttgacgaaca gcctggtcgc ggcacttaac accttgacct gatattcact ggcacgttcc
     4741 ggcgtgtgcg agtgatagta gccaacggcg cgaagcaaat cgccccccgc ttcgtccaga
     4801 tagacgcgca tgatcgcgcc cgcggccgcg atgttgaagc agggatcgac gattaaccgg
     4861 gcgcgtaccg catcctccgt catgccggtg atcgccgcga attgcggcac ccagagcgtg
     4921 ttcacctgca tgacgccaag atcggcagag ccgtcggtgt tgcggctgat cgtacccggt
     4981 ttaccaccct cgaccatctg gatggacggt aagacgcgcg gcggcaaatg gtaaaaggat
     5041 gcggctgcga ccatgcaagc gagaaagggg atagccattg tgtcgcgctg cttccgatcg
     5101 tcaccatggg gcctggctgg aacgtatcgc accagttatg gcgtttgcca agggcatcgc
     5161 agaaatgtca acattaggag gttcgtacgc cgccgtcgcc gggatcgcct ggagtccggc
     5221 ttcggttcag acggctgtgc gcgcgcagcc gttccataaa tcccggagga cgcggagctg
     5281 cttattggcg ctgccgttct tctccgcgtc ctcggcgcac tccgcgttct cggtgaaatt
     5341 gccttggttt cagcaaactc aggccggttc ccggagaacc tgaacgagac acccaacgtt
     5401 tcggattccc tttgggctgg tgttgtgtgc cggcacgatc agtacgacca tggatcgcgt
     5461 gcggtcgcca caatgatgtc gggccagcgc aaccctgcgt ctttggtaaa caccaaccgg
     5521 atccgcaata gtttcggcac cgacgtgcca acccacgccg tagcccaccc gccgggcggc
     5581 agatgcaggg ttgggtccca gtaggcgaac tcgacatggt ccacgttggc cagtagatcg
     5641 atccgcgccg ccgccggttt cgggacgatc cagttacgat accacggcag ccaggccaga
     5701 tagagccggt gctccggatc gacgccgatc gtaacgtccg cgtcccgggt ccttgtggcc
     5761 gtgagactct ccggcatcat ggtgcgaaac gacaggaccc gcgcggtgcc ggcaaaccgt
     5821 gcttcagcgc cggccgcacc tggccatgcc tgggcgacca gggacctcag ggtttcgtcg
     5881 accggaccga cctggtttgc agccgtcgta tcgcgggcct ggctcagcag agcctgctgg
     5941 ccaaagcgaa ccccggctga aagcccggcg agaatgagtc cgagcacagc cagcgctgcc
     6001 aaaacctcaa tcagcgtgaa gcccgcgcag caattggcgg aacagcgccg agcggtatgg
     6061 gtcaacggtc cggcaccgca gctacggatt gcagatcgcg tcggtgctgg ctgtcgaggt
     6121 cggcggaccg gccgaacaaa ggtcataatc atgcccagac cgcggggatg ggttccgata
     6181 ggtgtaaggg tgattccacg ggtcgacggg aacgccgcct ttaaggtacg ggccattcca
     6241 cgcttcgaca ccggtcggac gctcgaccag ggcgcgcagg ccttgttcac tatcggggta
     6301 agtcccgaca tccagtttat acatgtccaa taccgagccg atccgctcga tcgactgctt
     6361 tgccaccgac acacgagcga aaccaagctg gcgcaacgcc gccggtgcga cgaggccaat
     6421 cagcagtcca aggatggcga tcacgacgag gatctcgagc aatgtaaagc cgcgctggtc
     6481 gtgctcgcgc gttttggtca tgcgttcgcc cctatgcaat tacattggga gagtccatag
     6541 cactgaggcc tgaggacgca aggggaggtg caaatgatcc agccaggaag gcggtatttt
     6601 gctgattgcg atacggtttc gccggtattg ttttgttatc aaactgtcac agaacaatca
     6661 accgccgcgc cggttgcgcg ctccgtgaca ctatgatgag agcctccgcg tggacgtgat
     6721 tgcgagtttg tcatctggcg tgatggggtg gctcgcaccg atcctggtgg cgccgttcat
     6781 cggcagcttc cttggcgttc tgattgtgcg gttgcctgag ggaaagcccg tcgcaatggc
     6841 tcgttcagca tgcgaccatt gcggccaccg gctggggagc cgggacctga tcccgttcgt
     6901 tagctacctg gtttcccggg gacgatgccg gtattgtggc gaggccatcg ggtcgtttcc
     6961 cttcctcatt gagctcgcag cactcgcggt tgctgtgtgg gccgtgacgg cggttgacga
     7021 cgcaccctgg gttgcgtgcc tgttcggttg gacattgctg acgctggcct ggatcgatct
     7081 gcgatccatg atcctgccgg atgtgctgac gttgccattg ctggcgttgg gattggcgac
     7141 gaccggcatg accaggcctg atgcgctcgc cgagcacctg ctcgctgcgg ctctcggcta
     7201 cctcaccctt gctgccgtgg cctgggccta tcgccgtttt cgagggcgcg acggtctggg
     7261 gatgggcgat gccaaattgc tggcagcgat tggtgcctgg ttgggcctga gtttgcttcc
     7321 ggtggcgttg ctgttggcag cctgcgccgg ccttgtggct gccgccggag cggcgcttac
     7381 cggcaaacga atgaccgcgg cgacggcaat cccgttcggg ccctttctgg ccctgtcggg
     7441 gtggttgctg tggctttatg cagaccgggt cgccgattgg ctcatggatg gttcactcgg
     7501 gccggtcttg tccggctggc tgatgggagg ctgaccgttc gcggtttgga acccggccga
     7561 tttctgcgag ttaagcggct gagtttgaat tgcaaatgcc gggttggcaa agtggtaatg
     7621 cagcggtttt gtaaagcgag gtaaccctaa gtattctgtc atctcaccgc gttcgggctg
     7681 agggcgggaa gctcggtcgc ccaacgattg cccgaaaggt cgaggatgcc attcggcaac
     7741 agcctggcgc cggtcatggc attttgaagg tggcaaagac tgtcggcgtt ggttcaggga
     7801 ccgttcagag gatcaagagg gagatggcgg caacattcag ccaaacgaca tgattcggcc
     7861 ctatcggcac tgagacacga attgggttgg gccataccgg aggcgatcgt cgcccgccaa
     7921 tggaaaatcg ggagagtttc agcgctcaag ctgggcaatc aggcatgacg ttcgaagaag
     7981 gtctcgaaca aatccactcg taatcaacca actgccgtca gaaaatgatc cgatattgga
     8041 aatcagtctt gaggcaaaac gaccgcctga cgccgacaaa tattgagcga ttatttgcaa
     8101 taatagtttc cagggagaac ggcaatggtc gctcgtgcat ggatcggtgg cggcaacaat
     8161 caggcatcaa atccgaagga ttggtctcct gtcggtgtgc cacaggtggg ggatacactt
     8221 ttcgtgatgg aaggtgcggc cacctacacg atgaatgtga gtgcggatga tctggtgggc
     8281 gacagtttga cagtggaacg cgccgaaccg ccatatgcct tgactgccaa cctttcacat
     8341 cacgcaatta tgaatgtcga agttggatat ggtggtaccg gtacgttcaa cttgtcgcaa
     8401 ggctcaacgt tgaatctacg agccgattat gggggcgaca cgatcgtcaa tgtctccggc
     8461 agcgatacac tcatcatcaa cgaccttgcc gttgcttctc aaggcggtgg tgatccagag
     8521 atcaatttgg catctggtgc ggtatggaga ggcacattcg atacctatgc catacagttc
     8581 gatatccgta cgactgacac gggacgcaaa agcaggtcag aatttcatcg acaatgaccc
     8641 cgacgtgaac tggaacgttc catttgtctg gccacggaat tcgttagatt ggatcacgtg
     8701 tgccacggtg aggcgcacgc catggtacat tacggcgaat ccggcctgaa actcgccgac
     8761 aagaggtatg cgggagacgt ggcgagaatt gacgaatggc tcgccgtcaa gtgtctcgtc
     8821 ccaggctacc gcctgaccgt cgacaccggc gaagaaatac caagcaaatg gcacggtctg
     8881 agcgtaagcg tcagtgccgg tcaaaccagg ctgcatcctg ggggcaccga aatccgattt
     8941 cagcccccgc ccaatgcgga attgcacccc ggcctggctg taaattcgaa atgttcctgc
     9001 gccaacagtg agc
//
LOCUS       DATAVD010000803         4654 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2868340, whole genome shotgun sequence.
ACCESSION   DATAVD010000803 DATAVD010000000
VERSION     DATAVD010000803.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4654
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2868340"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..211)
                     /locus_tag="VHX39_15390"
     CDS             complement(<1..211)
                     /locus_tag="VHX39_15390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3992552.1"
                     /translation="MPRRTFRNIASPSRRTLLKSAAAIAGTAAGSGAITGFPLIWAQN
                     IKDVVLRHNGTPVTAIPAIGEQANKD"
     gene            518..2104
                     /locus_tag="VHX39_15395"
     CDS             518..2104
                     /locus_tag="VHX39_15395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3992553.1"
                     /translation="MRRRHFLAGTAAAAAATRTRVTRAGTANVLRFVPQADLTVVDPV
                     MTTAYITRNHAVMVWDQLYGIDSQLQPQPQMVDGHTVEDDGHLWTFTLRDGLHFHDGE
                     SVRGRDCVASIRRWAARDPMGQALLARTAEMTAPDDRRFAIRLTRPFSLVLNCLAKLG
                     PPALLIMPERLALTDPFQSIKEIVGSGPFRFVPAERVVGSQVVYERNQDYVPRPNGTP
                     DWLAGPKIVNFDRVEWHVMPDPGTAASALENGEVDWWENPSNDLVPALERNSGIRVQD
                     TGRLGTLGTGVFNHLYPPFDKPAVRRILLEAFSQTDFMTAAAGTNPEMWRAGVGVFTP
                     GTRMASDAGMRIINGPKRDVPALRAALRDAGYQNERVVFMVSADQPVQSAQGAVALDV
                     MHQLGMEVDYVVTDWGTVVQRRASKEPPTRGGWNMFITGWNGLDMTTPVTNQMLRANG
                     AKAWFGWPDVPALQALNEAWLDAPDQDAQRRIAADLQREALQQAVYFPTGQYFSRTAC
                     RRDISGILQGQYLFWNVRRG"
     gene            2216..2623
                     /locus_tag="VHX39_15400"
     CDS             2216..2623
                     /locus_tag="VHX39_15400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992554.1"
                     /translation="MRWSRAFGFIVAALPGAAFAGSLACAPDIVGRWTGRVLDGGRIK
                     ELRTEFSTGSGQLTGRYHVEDVDGGYDGTLTDFTPLGPCAGEFLWHDRNGTGEVRVDF
                     RPDRDRFDGLWGDDEPLPDHIFTGWRSRPVPVS"
     gene            complement(2755..3648)
                     /locus_tag="VHX39_15405"
     CDS             complement(2755..3648)
                     /locus_tag="VHX39_15405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3992555.1"
                     /translation="MLRLDLADLSLFRHIAETGSITAGAAKSNLALAAASTRLRGMEA
                     AIGAKLAERSRHGIDLTPAGHTLLAHARLLLADAERMHEAMGAYAGGAIGHIRMLSNT
                     NALTEFLPDVLGRFLAAHPLVTVDLQERLSDEIVGLVAEGAAELGIVAATADLSAVET
                     YPFRTDRFVLVVPRGDVLAARREIGFAELLDRDLVGLDQASAIQRFLAERAARLGARL
                     KLRVRLRSFDAVCRMVEAGVGVGIVPQTTARSASRTLAIEAVPLADEWAVRALRLCVR
                     TLAALPPHTRQLVDHLLLPPE"
     gene            3946..4383
                     /gene="sdhC"
                     /locus_tag="VHX39_15410"
     CDS             3946..4383
                     /gene="sdhC"
                     /locus_tag="VHX39_15410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HEX3992556.1"
                     /translation="MRDVRDAQMVARNSDGKLVRRPLSPHVQVYRWPLSMALSITHRV
                     TGVGLGIGTLLLTLWLLTAATSENGFDRFQYFLGSAVGLFLLFCWTLSLVFHLLTGVR
                     HLWMDTGNGFEETQYQNSAIAVLVGTGALTILIWVIGLISWYW"
     gene            4401..>4654
                     /locus_tag="VHX39_15415"
     CDS             4401..>4654
                     /locus_tag="VHX39_15415"
                     /inference="COORDINATES: protein motif:HMM:NF013307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HEX3992557.1"
                     /translation="MPELSNPPHIDMLRSPLARARGLGSARSGSKHWWGQRLTAIALV
                     PLTLWFIWSAVRLTNASQADVADWLSSPVRMALMLALIFAT"
BASE COUNT          828 a         1455 c         1480 g          891 t
ORIGIN      
        1 gatctttgtt ggcctgttcg ccgatggccg ggatagcggt caccggcgtg ccattgtgcc
       61 gcagcacgac atccttgatg ttttgcgccc agatcagcgg gaagccggtg atggcgcccg
      121 atccggcggc ggttccggcg atggcagcgg cggatttcag cagcgtccgg cgggacgggg
      181 aggcgatatt tcgaaacgtg cgacgcggca tcgggacgcc tttctgctca catattaatc
      241 aaatccctcc tgtttggctg atttcgtgga cgagggaaca cgctagccgg gattactgcg
      301 acgcacaacg cccaaaatca aaccaaattc tatttgccta tcagatgtcg tctatttttt
      361 aatcaaatag atttgtgcag ccagggttct gcctaattgt tgaaccgcgc gcggcgcgcc
      421 gctccgcgcg atctgaaccc gcatgggttc ccggcacccg cacaccgcct ggcacccgca
      481 ttgctacgtc ctggccggga agatcaggag accggatatg cgtcgacgtc acttcctcgc
      541 cggaaccgct gccgctgccg cagcaacgcg gaccagggtc acccgagccg gcaccgcgaa
      601 cgtgctgcgc tttgttccgc aagccgatct gaccgtcgtc gatccggtaa tgaccaccgc
      661 gtacatcacc cgcaatcacg ctgtgatggt ctgggaccag ctttacggga tcgacagcca
      721 acttcagccg caaccacaaa tggtcgacgg ccacaccgtc gaggacgatg gccatttgtg
      781 gaccttcacc ctgcgcgacg gactgcactt ccatgatgga gagtcggtgc gcgggcgcga
      841 ctgcgttgcc tcaatccggc gttgggcggc acgcgatcca atgggccagg cgttgctcgc
      901 gcgcacggcg gagatgacgg cgccggatga ccggcggttt gctatccggc ttacgcgtcc
      961 cttcagtctc gtgttgaact gtctcgccaa gctcgggccg ccggctttgc tgatcatgcc
     1021 ggagcgcctt gcattgaccg atccgttcca gtcgatcaag gaaatcgtcg gcagcggccc
     1081 gttccgtttc gtccccgccg agcgcgtggt cggcagccag gtcgtctacg agcgtaacca
     1141 ggactatgtg ccgcggccaa atggcacacc cgactggctg gctggtccga aaatcgtcaa
     1201 tttcgaccgg gtcgaatggc atgtcatgcc ggaccccggc accgctgcct cggctctgga
     1261 gaacggcgag gtcgactggt gggagaaccc ttccaatgac ctggtgccgg ctttggagcg
     1321 caactccggc atccgcgtcc aggacaccgg tcgcctgggc acattgggca ccggtgtgtt
     1381 caaccacctt tacccgccgt tcgacaaacc ggcggtgcgg cgcatcctgt tggaagcatt
     1441 ttcccagacc gatttcatga ctgcggccgc gggcaccaac cccgagatgt ggcgcgccgg
     1501 tgtcggtgtc ttcacgccgg ggacgcggat ggccagcgat gccggcatgc ggatcatcaa
     1561 cggtccgaaa cgcgatgtgc cagcgttgcg ggcggcgctg cgcgacgctg gctatcagaa
     1621 cgagcgcgtg gtgttcatgg tctccgccga tcagcccgtg caaagcgcac agggtgcggt
     1681 ggcgctggat gtaatgcatc aactggggat ggaggtggat tacgtggtca cggactgggg
     1741 cacggtggtg caacggcgtg ccagcaagga gccgcccacc agaggcggtt ggaacatgtt
     1801 catcaccggt tggaacgggc tcgatatgac gacgccggtg accaatcaga tgctgcgggc
     1861 gaatggcgcc aaggcgtggt tcggctggcc tgacgtgccg gctttgcagg cgctgaacga
     1921 ggcgtggctg gatgcgccgg accaggatgc gcaacgccgc atcgccgccg acctgcaacg
     1981 cgaggctctg caacaggcgg tgtattttcc caccggccaa tacttttccc ggactgcctg
     2041 ccggcgcgac atctcgggta ttctgcaagg ccagtatttg ttctggaacg tcaggcgcgg
     2101 atgatggcgg ttcgaaccag gccgcccgcg acaacgtgat tgatatggcg gccgtctgga
     2161 cccattcggc tttgtggttc aacatccggg taagcgaaat gaggttgcct cggtcatgcg
     2221 atggtctcgt gcctttgggt tcattgtcgc agcgctgccc ggtgcggcgt ttgccggttc
     2281 cctcgcctgc gcgccggaca tcgtgggacg gtggactggg cgggtgctgg acggcggacg
     2341 gatcaaagag ctgcgcactg agttctccac cgggtccggc cagttgactg gtcgttatca
     2401 cgtcgaggac gtcgacggcg gttacgatgg gaccctcacc gacttcacac cgctggggcc
     2461 ctgcgcaggt gagtttcttt ggcacgaccg caacggtacc ggcgaagtgc gggtcgactt
     2521 ccgcccggat cgtgatcggt tcgacggctt gtggggcgat gacgagcctc tgccggacca
     2581 tatttttacg ggttggcgtt cgcggccggt gccggtcagc tgacccgttc ggcacggccg
     2641 catggaatca atcgccgcgg cttcgaacca tctcaggacc gcaatttcag gtccttacga
     2701 gccgatcatg cccgcccctc ttcgccggta atgatcgaat cgcggctatt cgcattattc
     2761 cggtggcaat aacaaatgat ccaccaactg ccgtgtatgc ggtggcaacg ccgccagtgt
     2821 ccgcacgcac aggcgcaacg cccgcaccgc ccattcatcg gccaatggca ccgcttcgat
     2881 cgccaaagtc cgcgacgcac tccgagctgt cgtctgcgga acgataccga caccgacgcc
     2941 ggcctccacc atccggcaca ccgcgtcgaa gctgcgcagt ctgacgcgca actttagccg
     3001 cgcgccgagc cgcgccgcac gctccgccag aaagcgctgg atggcactcg cctgatcgag
     3061 cccgaccaga tcgcggtcga gcagttcggc gaaaccgatt tcccgtcgtg cggcgagaac
     3121 gtctccccgc ggcaccacaa gcacgaaacg atcggtgcgg aacggatagg tttcgacagc
     3181 agagaggtcg gctgtcgcag ccacaatgcc cagttcggcg gcgccttcgg cgacaagtcc
     3241 gacgatttcg tcactgagac gttcctgtaa gtcaacggtg accagcggat gcgcggccag
     3301 gaaacggccg aggacatccg gcaaaaactc ggtcagtgca ttggtgttgg acagcatgcg
     3361 gatgtggccg atggcgcccc cggcgtaagc gcccatcgcc tcatgcatac gttcggcgtc
     3421 ggccagcagc agccgagcat gcgccaacag cgtatgaccg gccggggtca ggtcaatgcc
     3481 atgacggcta cgctccgcca gtttcgcacc aatcgccgcc tccatgccac gcaaacgcgt
     3541 gctggccgcg gcgagcgcca gattggactt cgcggcaccg gctgtgatgc tgccggtttc
     3601 ggcgatgtgg cggaacaggc taaggtccgc aaggtcgagg cgaagcatgg tttccttcgt
     3661 attccgcgaa ggcaacatga cgcaattaca tattttcggc cagcttcggt atcgccatct
     3721 tcgcgcttaa cagaaggacg gaaaattgac ggacaaccct gacccggcat cgcgttgacc
     3781 cgccgtgttg gggcgactaa gcaacattca agaccggatt gaagcgaccc atgcaccctc
     3841 agcgaagcgg ccctcgaggg cgccgcggcg cgaacgttga gaccatggcg gagcgagcct
     3901 tgagacccca ccggagcgaa ccatgagacc cgagcggggc gagccttgag agacgtacgc
     3961 gacgcgcaga tggtggcgcg caactcggat ggcaaactgg tccgccgacc actttccccg
     4021 cacgttcagg tttaccgttg gccgctcagc atggcgctgt cgatcaccca tcgggtcaca
     4081 ggcgtcggtc ttggcatcgg cacgttgctg ttgaccttgt ggctgctgac cgctgccacg
     4141 tccgagaacg ggttcgatcg gttccagtat ttcctcggct cggcggttgg tctgtttttg
     4201 ttattctgct ggaccctctc gctggtgttc catttgctga ccggggtgcg ccatctttgg
     4261 atggataccg gcaatggctt cgaggaaacg caataccaga actcggcgat cgccgtgctg
     4321 gtcggcaccg gcgcgctgac gatcctcatc tgggtcattg gcctgataag ctggtactgg
     4381 tgaactggta gagggacgcg atgccggagc tttccaaccc gccccatatc gacatgctgc
     4441 gctcgccgtt ggcgcgcgcc cgcggtctgg gctcagcgcg atccggatcg aagcactggt
     4501 gggggcagcg gctgaccgcg atcgcactgg tgccgctgac gctctggttc atttggtcgg
     4561 ccgtgcgtct gaccaatgcc tcccaagccg acgtcgccga ctggctctcg tcgccggtgc
     4621 gaatggcact gatgctggcg ctgatttttg cgac
//
LOCUS       DATAVD010000804         2825 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1750336, whole genome shotgun sequence.
ACCESSION   DATAVD010000804 DATAVD010000000
VERSION     DATAVD010000804.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2825
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1750336"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..230)
                     /locus_tag="VHX39_15420"
     CDS             complement(<1..230)
                     /locus_tag="VHX39_15420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992558.1"
                     /translation="MSQTHQSNAKGKPVAVVIGATSKWQSDGRNTVLAHGKTVDDSSL
                     PVGVRWGVGGAVSQKFAQEGFFVVLTTRTDANA"
     gene            complement(285..1112)
                     /locus_tag="VHX39_15425"
     CDS             complement(285..1112)
                     /locus_tag="VHX39_15425"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3992559.1"
                     /translation="MQIVDAQIHTWGTGLPSNLSHWQVTHFTPEEAIALMDGSGVDAA
                     VIHPPGWDPNSTPMALKAVQDYPGRFAIMGALPLDQPESRARIGHWRDQPGMLGLRYG
                     FLSDPARQWLKDGTINWLWAEAEKAGVPIAMLATDSLTDIAGIAQRHPALRLTIDHLG
                     GRGGTTTLKDAAAMTHVPDLLALAKFPNIAVKATGAPGYSTEVYPFPGMHTYLHQIYD
                     AFGPHRMFWGTDISKMPCSWRQCVTMFTEELPWLNDQDRLLIMGEALCAWWGWARPT"
     gene            complement(1319..2539)
                     /locus_tag="VHX39_15430"
     CDS             complement(1319..2539)
                     /locus_tag="VHX39_15430"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3992560.1"
                     /translation="MDTMTDETGLPADIDAQPLVQAAIAMQPVIRACHDEIEREQRMP
                     KALVEQMKEAGFYRMVIPRSLGGLQVDPLTYLRVAELLAQAAGSVGWNIANNGVGQLV
                     TLGLPDEGVQEIHGQGMPSVMAGTAVQGGGQAVQVEGGYRVNGHWTFGSGCQESSWML
                     GSFQILDDGEPRRGPNGGSLYWRGVFPRAEAMVVPGSWDVAGLRGTGSFDWTVKDVFL
                     PERRACPHVGVPLDNQWSRWPGITYALPSQCWVGPHHSAVICGIARAGIDALIALAVE
                     KSPRGRTGMLCEYPQVQDSVGRADAILGAGRTYRNAMITELWNTIAAGGDTTLEQRAR
                     CRLASTYAGDSARQAMDLVYRHGGSTSFKRESRLAECWRDLHVVAQTVTISPEWYPIG
                     GRVLLGMDAGPRLR"
BASE COUNT          534 a          926 c          822 g          543 t
ORIGIN      
        1 gcattggcgt cggtacgggt tgtcaggaca acgaagaagc cctcttgcgc aaatttttgc
       61 gagacggctc caccgacccc ccagcgcacg ccgaccggca agctgctgtc atcgactgtc
      121 ttcccgtgcg ccagcacagt attgcgccca tccgattgcc atttcgaggt tgcgccgatt
      181 accacggcaa ccggcttgcc tttggcattg ctttggtgag tttggctcat gcggaatggt
      241 tccttttcgg ttggttacgt tctcggatgg atttgggcag aaggtcaggt gggccgggcc
      301 cagccccacc atgcgcacaa cgcctcgccc atgatgagga gtctgtcctg gtcattgagc
      361 caaggcagtt cctcggtaaa catcgtcaca cattgacgcc aggagcacgg cattttcgaa
      421 atgtcggtgc cccagaacat acggtgcgga ccgaacgcat cgtaaatctg gtgcagatat
      481 gtgtgcattc cgggaaatgg atagacttcg gtggaataac ccggcgcgcc ggtggctttg
      541 acagcaatgt tagggaattt tgcgagggcc aggaggtccg ggacatgggt catcgcagcg
      601 gcatctttga gcgtggtggt gccgcctcgg ccacccaggt gatcgatggt gaggcgtaga
      661 gcaggatgcc gttgcgcgat gcctgcgata tcggtcagcg agtcagtggc cagcatggca
      721 atcggaacgc cggctttttc ggcttcggcc catagccagt tgatggtgcc atccttcagc
      781 cactggcgcg ccggatcgct caggaaccca tatcgcagac cgagcatgcc gggctgatcg
      841 cgccaatgcc cgatgcgggc acgggattcc ggctggtcga gtggcagcgc ccccatgatc
      901 gcaaaacgcc ctggatagtc ctgcaccgcc ttcaatgcca tcggggtaga gttcgggtcc
      961 caccccggag gatgaataac ggcggcatca actccgctcc cgtccatcag ggcgatcgcc
     1021 tcctccggcg taaaatgtgt cacctgccaa tgcgagaggt tactgggcag gccggtcccc
     1081 caggtgtgaa tttgggcgtc gacgatctgc atggcgttcc cctcccgtcg ctttctgcgc
     1141 caataaggtt agcgcaggcg gtcggatcgg aacactggtg gcaattcgcc ggttgatcgt
     1201 tgcgacgaag tcccattctg acgctcaatt gacgtaatac agatcagcgt cgcttcactt
     1261 caaaccgata cggcgtcgca gtcgctgctc gcgagagcgc gacatccgcc cgcgtcccct
     1321 accggagccg cggaccagca tccatgccca gcaacacgcg cccgccgatc ggataccact
     1381 cgggcgagat cgtcacggtc tgagcaacca catgcaaatc gcgccagcat tcggccagcc
     1441 ggctttcacg cttgaacgag gtactgccgc cgtgacggta caccagatcc atcgcctgac
     1501 gcgcactgtc accggcgtac gtcgatgcca atcggcagcg cgcccgctgc tccagtgttg
     1561 tgtccccgcc agcagcgatc gtgttccata gttcagtaat catcgcattg cggtaggttc
     1621 gcccggcacc gagaattgcg tcggcccggc caacggagtc ctgcacctgc ggatactcgc
     1681 acagcatccc ggtgcgtcca cgcggtgact tctcgacagc cagcgcgatc agcgcatcga
     1741 tgccggcgcg cgctatgccg caaatcaccg cactgtggtg tggcccaacc cagcactggc
     1801 ttggcaaagc gtaggtgatc ccaggccaac gcgaccattg attgtccagg ggaacgccga
     1861 catgggggca ggcccgccgt tccggcagaa acacgtcctt cacggtccaa tcgaagctgc
     1921 cggtcccgcg caggccggcc acatcccagc tgccgggcac aaccatcgct tccgcgcgcg
     1981 gaaacacccc acgccaatac agcgaaccac cgttcggacc tcgacgcggc tccccgtcgt
     2041 ccaaaatctg gaaactcccc agcatccagg aactttcctg acatccgctg ccaaaagtcc
     2101 agtgcccgtt gacgcgatag ccgccctcga cctgcacggc ttgccctccg ccctgcaccg
     2161 cggtgccggc catgacggaa ggcattcctt gcccatggat ttcctggacg ccttcgtccg
     2221 gcagcccgag cgtaaccaat tggccgacgc cgttgttggc aatattccag ccgaccgagc
     2281 ctgcagcctg cgccagcagc tccgctacgc gcaggtaggt cagcgggtcg acctggaggc
     2341 cgcccagaga gcgtgggatc accattcggt agaagccggc ttccttcatc tgttcgacga
     2401 gggctttcgg catacgctgc tcgcgctcga tctcgtcatg gcaggcacgg atgaccggct
     2461 gcatcgctat ggcagcttgc accaggggct gtgcgtcgat atctgccggt aagccggtct
     2521 cgtcggtcat cgtgtccatt gtcggctcct gccccgttgc gtgttgcaac cctgaacgca
     2581 ctttgccgcc gtgtcacgcc cctcccgcag ggcagtcaag caacaattca accggcgggc
     2641 gcctcgcgtt ctgaaaaccg aagtccgatt ggagtaccgt caacaacgca actgttcccg
     2701 tcagtgcgga atgcccaact tcgatcggtc gctgacatgc ctcccgcggc aacgtccacg
     2761 attgactttg caacgcaaca cacggattgc tgcaagtcac gccacgatct tcagcggtgt
     2821 cgaac
//
LOCUS       DATAVD010000805         1520 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2868592, whole genome shotgun sequence.
ACCESSION   DATAVD010000805 DATAVD010000000
VERSION     DATAVD010000805.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2868592"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..281)
                     /locus_tag="VHX39_15435"
     CDS             complement(<1..281)
                     /locus_tag="VHX39_15435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3992561.1"
                     /translation="MLTRRALLTSSMAVPVATSLAEATAATPQVLRIGMTAADLPTDT
                     GIPNNGGEGYRFLGYPVYDAVINWDFTHPNEIADVTGGLFSAWEIDPAN"
     gene            complement(392..>1520)
                     /locus_tag="VHX39_15440"
     CDS             complement(392..>1520)
                     /locus_tag="VHX39_15440"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX3992562.1"
                     /translation="RLLEGYVPDADATTVAKLADAGTVMLGKLSTHEFAMGGPSFDLP
                     WPPARNPWNPDHFTGGSSSGTGAATAAGIIFGGTGSDTGGSIRSPAAFCGIAGIKPTY
                     GLCSRKGIQPLSFTLDHAGPLAWTVEDCALLLQAMAGYDPGDPASANRPVPDMTAYLG
                     KGVAGLRIGVVRGWHEQEVPVSPATAKGIDDAAALFGKLGATVSNITLPSLRDFQVAT
                     FLIMAPEAFAIHEPWLTARFNDYGELLRDRLALGGMIRAVDYVQALRLRRELCLSVAD
                     AMTEFDVLLTAAQPGEAPRIDAVPKWALMERPGFTNPANVTGYPAMSICSGYGEGGLP
                     VAIQLMAKPFQEALLLGAAEAYEAATPWRDTRPAIAAAEAT"
BASE COUNT          258 a          471 c          528 g          263 t
ORIGIN      
        1 tggttcgccg ggtcgatctc ccacgccgag aacaggccgc cggtgacatc ggcaatctca
       61 tttggatggg tgaagtccca gtttatcacg gcatcgtaaa ctggatagcc gagaaagcga
      121 tatccctcgc cgccattgtt agggataccg gtatcggtgg gcagatcggc tgccgtcatg
      181 ccgatgcgca gcacctgcgg cgtggcggcg gtggcctcgg caagggaagt ggccacggga
      241 acagccatgg acgaggtcag aagggcgcgt cgcgtcagca tcggttggct cctgccagga
      301 agagggcatc ggatgattgg tggtcaggcg ggcatcgagg cggcaggctg tgtccactgg
      361 tgtgtgcgca aggggatcgt tcgttacctg ttcacgtcgc ttccgccgcg gcaatcgcag
      421 ggcgggtgtc gcgccagggt gtcgccgcct cgtaagcctc tgccgcccca agcagcagcg
      481 cctcttgaaa tggcttggcc atgagctgga tggcgacggg cagcccaccc tcgccgtaac
      541 cggaacagat tgacatggcg ggatagcctg tgacgttggc tgggttggtg aagccgggcc
      601 gctccatcaa ggcccatttg ggtaccgcgt cgatccgcgg cgcctcgcca ggctgtgcgg
      661 cggtgagaag cacgtcgaac tccgtcattg cgtcagcgac ggacaggcac agctcacgcc
      721 gcagccgtaa cgcctgcaca tagtccactg ctcggatcat gccgccgaga gccaagcggt
      781 cgcgtaacaa ctcgccgtag tcgttgaacc gggccgtgag ccatggctcg tggatcgcga
      841 aggcctcggg cgccatgatc aggaatgtgg cgacctggaa gtcgcgcagc gagggcagtg
      901 taatgttgct gaccgtggcg cccaacttgc cgaacaaggc ggcagcgtca tcgatgccct
      961 tggcggtggc cgggctgacc ggcacctcct gttcgtgcca gccgcgcacc acgccgatgc
     1021 gcagcccggc cacgcccttg ccgagatacg cggtcatgtc cggcaccgga cggttcgcgc
     1081 tggcagggtc gcccggatcg tagccggcca tggcttgcag tagcaatgcg cagtcttcca
     1141 cggtccaggc cagcggcccg gcatgatcga gtgtgaagga tagcggctgg atgcccttgc
     1201 ggctgcacag tccatacgta ggcttgatgc cggcgatgcc gcagaacgcg gccggactgc
     1261 ggatggatcc gccggtatcg gaaccggtgc cgccgaagat gattccagcg gcggttgcgg
     1321 cgccggtgcc gctgctcgac ccgccggtga agtgatccgg gttccacgga ttgcgcgccg
     1381 gtggccacgg caggtcgaag ctgggtccgc ccattgcaaa ctcgtgggtg gacagcttgc
     1441 ccagcatgac cgtgccggca tcggcgagtt tcgccacagt ggtcgcatcc gcgtccggca
     1501 catagccttc cagcagcctg
//
LOCUS       DATAVD010000806         3761 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_262452, whole genome shotgun sequence.
ACCESSION   DATAVD010000806 DATAVD010000000
VERSION     DATAVD010000806.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3761
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_262452"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..462
                     /locus_tag="VHX39_15445"
     CDS             <1..462
                     /locus_tag="VHX39_15445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEX3992563.1"
                     /translation="IFRAMRSGAEYPEAHATACALAAREAACRGLREGSKAYQELFAR
                     TVPPYDVRKFPNRWWKLEPDQPVRTLMAHIGKDTYSHIHWDSAQARTISVREAARLQG
                     FPDGFVFEGTMNPAFRQIGNAVPPLMAAAIAEVMLETLQKAARRLIPLMAA"
     gene            complement(488..979)
                     /gene="paaD"
                     /locus_tag="VHX39_15450"
     CDS             complement(488..979)
                     /gene="paaD"
                     /locus_tag="VHX39_15450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaD"
                     /protein_id="HEX3992564.1"
                     /translation="MVTDDTLLERARAAAATVPDPELPPLTVEDLGILRNVRLDDGTV
                     EVAITPTYSGCPAMREIGVAIEKAVLEAGAEKVRVRYVLTPAWTTDWLTDSARAKLLE
                     LGIAPPEPGQGMEALFGRPAVTCPRCGSMNTERISAFGSTACKALHRCLDCREPFEAF
                     KCH"
     gene            complement(973..1680)
                     /gene="paaC"
                     /locus_tag="VHX39_15455"
     CDS             complement(973..1680)
                     /gene="paaC"
                     /locus_tag="VHX39_15455"
                     /EC_number="1.14.13.149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaC"
                     /protein_id="HEX3992565.1"
                     /translation="MTTTSITLVETPVVQSYLALADDALVLGHRTSEWTGHAPLLEEE
                     LALANIALDLIGQARMLYQAAGELTGHSEDELAYLRDPPAFRNALIMELPNGDFAFTI
                     ARLFLVSVASDQQWRAGFDDPALTAVAEKAMKETAYHVRHSAEWLIRLGDGTAESHRR
                     AQDAVDALWPFTGELTGSREAWLRQVSPVLLRATLQRPNDGWMQMGGRTGRHTEHLGH
                     LLAEMQVLPRTYPGAIW"
     gene            complement(1682..1969)
                     /gene="paaB"
                     /locus_tag="VHX39_15460"
     CDS             complement(1682..1969)
                     /gene="paaB"
                     /locus_tag="VHX39_15460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003857353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaB"
                     /protein_id="HEX3992566.1"
                     /translation="MADPATRLWEVFIRARNGLAHRHAGSVHAADPEMALQAARDVYT
                     RRGEGLSIWVVPSDAIVASDPSARESLFEPTGSKIYRHPTFYEVPDEVGNM"
     gene            complement(1969..2940)
                     /gene="paaA"
                     /locus_tag="VHX39_15465"
     CDS             complement(1969..2940)
                     /gene="paaA"
                     /locus_tag="VHX39_15465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaA"
                     /protein_id="HEX3992567.1"
                     /translation="MYSQALSSAPAQADTSESGKRFQQRIDAEERIEPNDAMLDGYRR
                     TLMRQISQHAHSELVGMLPEGNWITRAPSLRRKAALLAKVQDEGGHGLYLYAAAETLG
                     CTREELVDQLLTGRAKYSSIFNYPTLTWADIGAIGWLVDGAAIMNQIPLCRCSYGPYA
                     RAMIRICKEESFHQRQGYEIMLTLCRGSDEQKAMAQDALNRWWWPCLMMFGPPDTQST
                     HTDSSTRWKIKRFTNDALRQKFVDATVPQGLHLGLAFPDLDLRFEDGHWVHGEIDWDE
                     FRRVLAGDGPCNRERLAARRKAHDDGAWVREAAAAWAAKQTTAKRAA"
     gene            complement(2943..>3761)
                     /locus_tag="VHX39_15470"
     CDS             complement(2943..>3761)
                     /locus_tag="VHX39_15470"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3992568.1"
                     /translation="MDFRADDLEYQSPGGQPLLARLYQPIGPGPFPAVLEVHGGAWTG
                     GDRFNNVVIAEALAADGIVVMSIDFRMPPVAGYPDTIADVNLGIRWLKANAEKFHSQA
                     DLVGGLGSSSGGHMLLLSALRPNDPRYAKLPLPGSAVDASLHFAIGCWPVADPLQRYQ
                     VKKAAGQERFVISHDKFWGSEAAMSEGSPTLILGRGETVAKPPVLIMQGTADDNLTPD
                     MADNFAAAYAQAGGSVRKEIFPGEPHAFISAKPTAPNTLRALEIIKTFVHEHAG"
BASE COUNT          693 a         1232 c         1162 g          674 t
ORIGIN      
        1 attttccgcg ccatgcggtc gggggcggaa tatcccgagg cgcatgcgac agcttgcgcg
       61 ctcgctgcgc gggaggcggc gtgtcgcggc ttgcgggagg gtagtaaggc ttaccaggaa
      121 cttttcgctc ggacggtgcc gccgtacgat gtgcgaaagt tccccaaccg ctggtggaag
      181 cttgaacccg atcagccggt gcgcacgctg atggcgcata tcggcaagga tacctacagc
      241 catatccatt gggattccgc tcaggcgcgg acgatctcag tgcgcgaggc ggcacgcctg
      301 caagggtttc cggatgggtt cgtattcgag ggcacgatga acccggcatt ccggcagatc
      361 ggcaacgctg tgccgccgct gatggcagcg gcgatcgccg aggtcatgct ggagacatta
      421 caaaaggcgg cgcggcgatt gataccgctg atggccgcgt aaaagcgggc ttcgtcgttt
      481 ctgccagcta atgacacttg aacgcctcga acggctcccg gcaatccagg caacgatgca
      541 gcgccttgca ggccgtggac ccaaacgcgc tgatgcgttc cgtgttcatc gaaccgcagc
      601 gcgggcaggt caccgcggga cgtccaaaca acgcctccat gccctgacca ggctccggtg
      661 gcgcaattcc caattccaac aatttcgcac gagctgaatc ggtcagccaa tccgtcgtcc
      721 aggcgggggt cagaacgtaa cgcacccgga ccttttccgc accggcctcc aacaccgcct
      781 tttcaatcgc gaccccaatc tcccgcatcg ctgggcagcc ggaataagtc ggagtaattg
      841 ccacctcgac cgtcccgtcg tccagccgca cgttccgcag aatgccgaga tcctcgaccg
      901 tcagaggcgg cagttccggg tcggggaccg ttgcggccgc cgctcgcgcg cgttccagca
      961 gcgtatcgtc ggtcaccata tcgccccggg ataagtccga ggcagcacct gcatttctgc
     1021 cagcaggtgc ccgagatgtt cggtatgccg gccggtgcgg ccacccatct gcatccagcc
     1081 atcgttcggc cgctgcaatg ttgcacgcag cagtaccggc gacacctggc gaagccatgc
     1141 ttcacgtgat ccggtcagtt cgccggtgaa cggccacagt gcgtcaaccg catcctgcgc
     1201 acggcgatgc gattccgcgg tgccgtcgcc cagccggatc agccactcgg cggagtggcg
     1261 cacgtgatac gcagtctcct tcatcgcttt ttcggcgacc gcggtcagcg ccgggtcgtc
     1321 aaatccggcg cgccattgct gatccgacgc gaccgagaca aggaacagcc gggcgatcgt
     1381 aaaagcaaag tcgccgttcg gcagctccat gatcagcgcg ttgcggaacg ccgggggatc
     1441 gcgcagatag gccagttcgt cctcggaatg accggtcagc tcgccagccg cctgatacag
     1501 catccgtgcc tgaccgatca gatcgagtgc gatattggcc agcgccagct cttcctccag
     1561 caggggcgcg tgaccggtcc actcgctggt gcgatgaccc agcaccaacg catcgtcggc
     1621 gagcgccagg tagctctgca ccaccggcgt ttcgaccagc gtgatggagg tcgtggtcac
     1681 actacatgtt cccgacttcg tccgggacct cgtagaacgt cgggtgacga taaatcttcg
     1741 aaccggttgg ctcgaacaac gattccctgg ccgatggatc ggaggcgacg atcgcgtcgg
     1801 acggcactac ccaaatggac agaccttcgc cacggcgggt gtaaacatcc cgtgccgcct
     1861 gcaacgccat ttccggatcc gccgcgtgca ccgagccggc gtgccgatgc gccaatccgt
     1921 tgcgcgcacg gatgaaaact tcccacagcc gggttgccgg gtccgccatc acgcagcccg
     1981 tttggcggtg gtttgtttcg ccgcccatgc ggccgcggcc tcgcgcaccc aggcgccatc
     2041 gtcatgggct ttccggcgag cggccaaccg ctcgcggttg cacggaccgt cgccggccag
     2101 aacgcggcgg aattcgtccc agtcgatctc gccatggacc caatgtccgt cttcgaaccg
     2161 caggtccaga tcgggaaacg ccaggcccag atgcaggcct tgcggcaccg tcgcgtcgac
     2221 aaacttctgc cgcaacgcat cgttggtgaa ccgcttgatc ttccaccgcg tcgagctgtc
     2281 ggtatgcgtc gactgcgtat ccggcggtcc aaacatcatc aggcaaggcc accaccaccg
     2341 gttcaacgca tcctgcgcca tggccttctg ctcgtccgag ccgcggcaca gggtcagcat
     2401 gatttcatag ccctgacgct ggtgaaacga ttcctcttta caaatccgga tcattgcccg
     2461 cgcgtacggg ccgtatgagc agcgacacag tgggatctgg ttcatgatcg ccgcgccgtc
     2521 caccagccaa ccgatcgcgc cgatgtcggc ccaggtgagg gtggggtaat tgaagatgga
     2581 ggaatatttg gcacgaccgg tcaacaactg atcgaccagt tcctcgcgtg tgcagcccag
     2641 ggtttcggcg gctgcgtaaa gatacagccc gtgcccgcct tcgtcctgaa ccttggcgag
     2701 cagtgcggcc ttgcggcgca gtgacggcgc gcgggtgatc caattgccct caggcagcat
     2761 gccgaccagt tccgagtggg cgtgctgact gatctgccgc atcagcgtgc ggcgatagcc
     2821 atccagcatg gcgtcattgg gttcgatccg ttcctcggcg tcaatacgct gctgaaaccg
     2881 ttttccggat tccgaagtat cggcctgggc gggcgcgctg ctgagggcct ggctgtacat
     2941 gattagcccg cgtgttcgtg cacgaaagtc ttgatgatct ccagcgcacg caacgtattc
     3001 ggcgcggtgg gtttggccga gatgaacgca tgcggctcac ccgggaaaat ctccttacgc
     3061 accgacccgc cagcctgggc gtacgcggcg gcgaaattgt ccgccatgtc cggcgtgagg
     3121 ttgtcgtcgg ccgtgccttg catgatcagc accggcggct tcgcgacggt ttcgccgcgg
     3181 cccaggatca gggtcggact gccctccgac atggcagcct cggagcccca gaacttatca
     3241 tgggaaatga cgaaccgctc ctggccggcg gcctttttca cctgatagcg ctgcaacgga
     3301 tcggcaaccg gccagcaacc gatagcgaaa tgcaacgacg cgtccaccgc cgaaccgggc
     3361 aggggcaact tcgcataacg cgggtcattg ggccgcagcg cgctcaacag cagcatgtgc
     3421 ccgcccgagg aactgccaag accgcccacc agatcggcct ggctgtggaa cttttccgca
     3481 ttggctttga gccagcggat cccgaggttc acgtcagcaa tggtgtccgg ataacccgcc
     3541 accggcggca tgcgaaaatc gatcgacatg acgacgatgc catcggccgc cagcgcttcg
     3601 gcgatcacga cgttgttgaa ccggtcgccg ccggtccagg cgccgccatg cacttccagc
     3661 acggcaggga aggggccggg cccgatgggc tggtacagcc gggccagcaa gggttgtcca
     3721 cctgggcttt gatactcgag atcgtcggcg cgaaaatcca t
//
LOCUS       DATAVD010000807         1941 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2307932, whole genome shotgun sequence.
ACCESSION   DATAVD010000807 DATAVD010000000
VERSION     DATAVD010000807.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2307932"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1548)
                     /locus_tag="VHX39_15475"
     CDS             complement(<1..1548)
                     /locus_tag="VHX39_15475"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEX3992569.1"
                     /translation="MLTHSGLLLEHFARLATNVAGTSSATIGVLGRRKELEVTRAGYG
                     LSREQLTMIQDIEGILDAGPDLTVVPDLAQDERFGARTALFEQSGLRFLAYQRLISPG
                     GERVGFICLIDGKARSALTEAQVTSLGQIASMIMADRQREQRHLHLMHVADRALRVDR
                     MLRLVSEAESCADALTNLLEALCHFHGAAVGQIWQLTAPDKPLVEVSRYDHDHETGFA
                     FQTIGPLATLNEMTAEAIRRNKPHAIRFPALEPVDDSGDTGASGFSGHVCIPIWAQQQ
                     RFGISLAFTTENVDLDTVVNDIASLGDTIRPALFQKVTEERIRFAAHHDDLTQLSNRL
                     MFQERLRKAIAASRSAGQAFALLCLDLDGFKLINDMHGHGFGDSLLVGVAQRLREAVR
                     ENDTVARMGGDEFAIIQRIDNQSDEAIAFAKRLIEAITQPFELAGRQALVGVSIGIAL
                     STEHGESPDQLMRNADHALYRAKKAGRKTYCLFDPAMEANMQEPFLVEQDLKDAISRG
                     DFSLAYQP"
BASE COUNT          369 a          582 c          602 g          388 t
ORIGIN      
        1 cggctgatac gccagtgaga aatcgcctcg gctgatggca tccttcaggt cctgctcgac
       61 caggaagggt tcctgcatgt tggcttccat cgccgggtcg aacaggcagt aggtcttacg
      121 cccagctttt ttggcgcggt acagggcatg gtccgcgttg cgcatcaact ggtcggggct
      181 ttcgccgtgc tcggtggaca gggcgatacc gatcgacacg ccgaccagcg cctgccggcc
      241 ggccagctca aacggctgag tgatcgcttc gatcagccgt ttggcgaaag cgatcgcttc
      301 atccgattgg ttgtcgatgc gttggatgat ggcaaactcg tcgccgccca tccgggcgac
      361 ggtgtcgttc tcgcgcacgg cttcccgcag gcgttgcgcg acgccaacca gcaggctgtc
      421 gccaaagccg tgcccgtgca tgtcgttgat cagcttgaag ccatccagat ccaggcagag
      481 cagggcgaac gcctggccgg cggaccggga agcggcgatc gccttgcgca gccgctcctg
      541 aaacatcagc cggttcgaca gctgggtcag gtcatcgtga tgagcggcaa agcggatgcg
      601 ttcctcagtc actttttgga acagcgccgg ccggatcgta tccccaagcg aggcgatatc
      661 attaaccact gtgtcgagat cgacattttc cgtggtgaac gcaagcgaga tgccaaaacg
      721 ctgctgctgc gcccagattg gaatgcagac gtgaccggaa aagccgctcg cgccggtatc
      781 gccgctgtca tccacgggtt cgagtgcggg aaagcgaatt gcgtgcggct tgttgcgccg
      841 gatcgcctcg gcggtcatct catttaaggt ggccaacggc ccgatcgttt ggaaggcgaa
      901 cccggtttca tggtcgtggt catagcggct gacctcgacc aacggtttgt cgggtgcggt
      961 caactgccag atctggccga ccgcggcgcc atgaaagtgg cacagcgctt ccagcaggtt
     1021 ggtcagggca tcggcgcagg attccgcctc cgaaaccaac cggagcatcc ggtccacgcg
     1081 cagcgcacga tcagcgacat gcatgagatg cagatgacgt tgctctcttt gccggtccgc
     1141 catgatcatg ctggcaatct ggcccagaga agtcacctgg gcttcggtca acgccgagcg
     1201 ggccttgccg tcgatcagac agatgaaacc gacacgctcg ccaccggggg aaatcagcct
     1261 ctggtaggcc aggaagcgta gaccggattg ttcaaataac gccgtcctgg caccgaaccg
     1321 ctcatcctgg gccaggtccg gcacgaccgt cagatccggg ccggcatcca gaataccttc
     1381 gatgtcctgg atcatggtca actgttcgcg ggacagacca taccccgcgc gtgtcacctc
     1441 gagctctttg cgccggccaa gcacgccgat cgtcgccgac gaggtgccgg cgacattggt
     1501 cgccagacgg gcaaaatgtt ccaataataa tccgctgtgg gtaagcaccg tctcgtgatt
     1561 ctttctgact aaattgctgg atttcccact cccacacgtg aaggtaatac gcgtcgcctc
     1621 ccggacggcg cctgcaattc cagcacgatg gaaatcccgc ttatgttgtt gatcagcccg
     1681 actttgtgcc aatttgcgcg tcgaagcgtt tcattcccat ttcgaggatg cgattcgggc
     1741 gagtggtgac ttgctgaaac ccaagtgtcg ggccggcgtt ttttccgcgt gccgggacag
     1801 ggttaacgcg gtgtccactt aagatcggcg acggcgtcgg atcgccgatt tgtcgccgga
     1861 ttcgcacaat ggcggggaca tggcggcatg cgggtctgcc gaggcttgca cgggtggaaa
     1921 ggtccgcgag accccggaat t
//
LOCUS       DATAVD010000808         2817 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1006129, whole genome shotgun sequence.
ACCESSION   DATAVD010000808 DATAVD010000000
VERSION     DATAVD010000808.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2817
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1006129"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..631)
                     /locus_tag="VHX39_15480"
     CDS             complement(<1..631)
                     /locus_tag="VHX39_15480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3992570.1"
                     /translation="MSLPLGPLPDTRYPDPRIEVLDRRFRYKQGNAGIERIATGFRWA
                     EGPVYFRDGGYLIFSDIPNNRMLRWLEDDGHLSVFRSPSHYTNGNSRDREGRLISCEH
                     DTQRVTRTELNGTITVLIDRFEGKPLNAPNDVVVASDGGIWFTDPGYGIDGPYEGHEA
                     ESMLPRNVYRLNPATGRASVVAGDFVRPNGLGFSPNEKLLYIVDSGITHG"
     gene            885..1322
                     /locus_tag="VHX39_15485"
     CDS             885..1322
                     /locus_tag="VHX39_15485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3992571.1"
                     /translation="MLETPLVSEFSHVKPGETPWRSDGLRDFFLYRDLGVAAATGGRV
                     IAQLVKANEAPEKGTGWHRHEAEFHIVFMTKGWAKFMYENEEHLVSAGDCVHQRPGIR
                     HYLFDYSPDMEYLEVVGPADFGSIDIAEGPCAVPPAAPWTDKS"
     gene            complement(1355..2038)
                     /locus_tag="VHX39_15490"
     CDS             complement(1355..2038)
                     /locus_tag="VHX39_15490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HEX3992572.1"
                     /translation="MTPGEGLVTMKGATLFISSKNYSSWSLRGFLLARLSGLQFEEQV
                     VSPDDPTRRAELLLQTSSIRIPYLVHGDVIVWDVLALAEYLNETFPKAHMLPEEPKAR
                     AHCRSISGEMHSGFAALRGSLPMNLKLYRPDFTLWSAVRADISRITDIWRECLDASHG
                     PWLYGKRPTIADAMYAPVAARFRTYDVKVDRVSEAYCEHVLAWPDLREWWAAAQREPE
                     QIEELDIEF"
     gene            2165..>2817
                     /locus_tag="VHX39_15495"
     CDS             2165..>2817
                     /locus_tag="VHX39_15495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HEX3992573.1"
                     /translation="MKYQIYQTKDDLLHPLREAARFGAAWVRAWDLGCMTPPLFRAIG
                     AAGELFAEAKLTHHRPDYGITTVPVGNRTAVVTEESADDTPFGTLLHFRKDLAVEQPR
                     VMLVAPMSGHFATLLRQTVRTMLPDHDLYITDWKNARDIPQSDGTFGFDSYVEHLIRF
                     QRVLGPGAHIVAVCQPTVAALAATAIMAEDHDPAQPRSLTLMAGPIDTRVNPTKVNML
                     "
BASE COUNT          574 a          864 c          846 g          533 t
ORIGIN      
        1 cgccatgggt gatgccgctg tcgacaatgt aaagcagctt ttcgttcggt gaaaacccaa
       61 gcccattcgg gcgcacgaaa tcgccggcca cgacactcgc ccggccggtt gccggattga
      121 gccgataaac gttccgtggc agcatggact cggcctcatg gccctcataa gggccgtcga
      181 tcccataacc gggatcggtg aaccagatgc cgccatcgct ggccaccacg acatcgttcg
      241 gggcatttaa cggtttgcct tcgaaccgat cgatcagcac ggtgatggtg ccgttcaact
      301 ccgtgcgggt gacgcgctgg gtatcgtgct cgcaggaaat caaccggccc tcgcggtcgc
      361 gggagttgcc gttggtgtag tgcgatgggc tgcggaacac cgacaggtgg ccgtcgtcct
      421 ccagccaacg cagcatgcgg ttgttcggaa tgtcgctgaa aatcaaatag ccgccgtcgc
      481 ggaaataaac cggaccttca gcccaacgga agccggtcgc gatgcgctcg atcccggcgt
      541 tgccttgctt gtagcggaaa cgccggtcga ggacctcaat cctgggatca gggtaacgcg
      601 tgtcaggcaa cggcccgagc ggcagcgaca tggttcctcc gcagtgaagc tgccggaggg
      661 taaaccgctt tcaagacctc cgcacaaccg gcggaatccg gttgcaatgc accatggccc
      721 gtgcgacgct gacgtggtgg tttggcgggc gtgcttaatg acccgcgaga ccagcggaaa
      781 acgtcctgaa ggcgggtctg gttgcaacaa cctggccgtg gacgtgacgt aaactggcaa
      841 tatgccggca tcggtcaacg gccccaaacg aggacgcaat gaccatgctt gaaacaccgc
      901 ttgtcagtga attttcccat gtgaagccgg gcgagacccc gtggcgaagc gacggtttgc
      961 gcgatttctt tctgtaccgc gatctgggcg ttgcggccgc caccggtggg cgggtgatcg
     1021 cccagttggt gaaggcgaac gaggcgccgg agaaaggcac cggctggcat cgccacgagg
     1081 ccgaattcca tatcgtcttc atgaccaaag gctgggcgaa attcatgtac gaaaacgagg
     1141 aacatctcgt ttcggccggt gactgcgtgc accaaaggcc ggggatccgg cattacctgt
     1201 tcgattactc gccggacatg gaatatctcg aggtggtcgg ccccgcagat ttcggctcaa
     1261 tcgatatcgc cgaaggtccc tgtgcggttc cgccagcggc gccctggaca gacaagtcat
     1321 gaattcctga gcgggggcgc gataacgcgc ctcctcagaa ttcgatatcg agttcctcaa
     1381 tctgctccgg ttcgcgctgc gctgcggccc accactcgcg taaatccggc caggccagga
     1441 catgttcgca ataggcctcg ctgacccggt cgactttcac gtcataagtg cggaaccgtg
     1501 ctgccaccgg cgcatacatc gcatcggcaa tcgtcggccg tttgccgtag agccacggtc
     1561 cgtgcgacgc atcgaggcac tcccgccaga tgtcggtaat ccggctgata tccgcccgca
     1621 cggcagacca tagcgtgaaa tccggccgat acagtttcag gttcattggc aacgagccgc
     1681 gcagggccgc gaaaccggaa tgcatctccc ctgagatcga ccggcaatgt gcccgcgcct
     1741 tcggttcctc gggcagcata tgcgccttgg gaaacgtctc gttgaggtat tctgccagcg
     1801 ccagcacgtc ccagacgatg acgtcgccat gcacgaggta gggaatgcgg atcgaggagg
     1861 tctgcaataa caattccgct cgccgtgtcg ggtcgtctgg cgagacgacc tgttcctcaa
     1921 attgcagccc ggacagacga gccaacagaa atccacgcag cgaccaggag gagtaatttt
     1981 tactactaat gaataaagtc gcacctttca tcgtgacaag gccttcccct ggtgtcatgc
     2041 tgcgctgcaa tataaacacc accggatatc aaaagcgagg gttcatgtta cgtcggccgc
     2101 cgatttcagc ccaggaccat ttgagaccgg cccgcatcca ttggaggtgc acgaccggct
     2161 ggccatgaaa tatcagatct accagacgaa ggacgacctg ctgcatccat tgcgggaggc
     2221 ggcgcggttc ggtgccgcct gggtgcgcgc gtgggatctc ggctgcatga caccaccgct
     2281 gttccgcgct attggtgctg cgggcgagct atttgcggaa gccaaactga cccaccaccg
     2341 cccggactac ggcatcacca cggttccggt gggaaatcga acagccgttg tcaccgagga
     2401 atccgccgac gacacgccgt tcggcacact gctgcatttc cgcaaggacc tcgccgtcga
     2461 acagccgcgt gtcatgctgg tggcaccgat gtccgggcac tttgcgacgt tgctgcgtca
     2521 aacggtacgg acgatgctgc ccgatcacga tctgtacatc accgactgga agaatgcccg
     2581 cgacattccg cagtccgatg ggacgttcgg cttcgattcc tatgtcgagc atttgatccg
     2641 atttcagcgc gtcctgggcc cgggtgccca tatcgtggcg gtgtgccagc ccaccgttgc
     2701 cgcgctggcc gccacggcga tcatggcgga agaccacgac cctgcccaac cccgcagtct
     2761 gaccttgatg gctgggccga tcgatacgcg ggttaaccca accaaggtca atatgct
//
LOCUS       DATAVD010000809         1502 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_635154, whole genome shotgun sequence.
ACCESSION   DATAVD010000809 DATAVD010000000
VERSION     DATAVD010000809.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_635154"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1502)
                     /locus_tag="VHX39_15500"
     CDS             complement(<1..>1502)
                     /locus_tag="VHX39_15500"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX3992574.1"
                     /translation="FHPDPVAAAVLSKNVPLPTNAITNRFIGNEGLPNTSNEYLIKGD
                     FQLIPNHHVTLDYFQSLGSQIVLPTGSNLPGWALSNYSYRQQNGNASDVWTVSSRSVN
                     QAWLSYSRMSAGRISMPAESLAAFGSDLDVQGTPSLAQISVANFFTLGNAITGPLAGD
                     NIYGLRDVFSTTRGRHTITAGGEVYLEKDFLETLLNNYGVFSFTSAVVPSTASGQATY
                     TRTGVAMADFLIGHPNTMSQDSPDNANENYWNYGLFLQDDWRVIPALTLNLGVRYDVQ
                     TAPIDTQRRIAVFEPGVQSKVSPSAMLGQLFPGDPGVPAGGVDTNYNHISPRLGFAYD
                     PFNKGRTVFHGGAGLFFDTISGNEWMLSQNFQPFAVRETNAFTHVVSLQNIYSTDCQD
                     FAGCVSPFPYLYDKTNPRYVSPASLVFVQQGMRWPYNVQVNFGVQQQFTQDLALSINY
                     VGVFNRKLPLFIDENAPNYNNANPGSNTTGNVNCRRPYDALPFATTTTCA"
BASE COUNT          319 a          402 c          472 g          309 t
ORIGIN      
        1 ttggcgcagg tggtcgtcgt ggcgaacggc aacgcatcgt atgggcggcg gcagttgaca
       61 ttgccggtcg tattcgaccc cgggttggcg ttattgtagt ttggcgcatt ttcatcgata
      121 aagagcggca gtttgcggtt aaagacgcca acatagttga tgctaagtgc gaggtcttga
      181 gtgaactgtt gctgtacgcc gaagttcacc tggacgttgt aaggccagcg cattccctgc
      241 tgcacgaaaa ccagcgacgc cggagagacg tatcgtgggt tggttttgtc gtagagatag
      301 ggaaagggcg aaacacaacc ggcaaagtcc tggcaatctg tcgagtagat attctgcagg
      361 ctgacaacat gggtgaacgc attggtttcg cggacggcga acggctggaa attctgcgac
      421 agcatccact cgtttccgga aatagtgtcg aagaacagtc cggcgccgcc atggaatacc
      481 gtgcggccct tattaaaggg gtcataggca aagccgagac gcggtgaaat gtggttgtag
      541 tttgtatcga caccgccggc cggaactccc ggatctcccg ggaacagttg ccccagcatc
      601 gcggacggcg agactttcga ctgcacgccg ggctcaaaaa cggcgatacg gcgctgggta
      661 tcgatcggcg cggtctgcac atcgtagcga acgccaagat tgagagtcag cgcgggaatg
      721 acgcgccagt cgtcctgcag gaataaaccg taattccagt agttctcatt ggcattgtcc
      781 ggcgaatcct gactcatcgt gttgggatgc ccgatgagaa agtccgccat ggcgacgccc
      841 gtcctggtgt aagtcgcctg gcctgacgcc gtcgagggca ccaccgcact ggtaaagctg
      901 aagacgccgt agttgttcaa cagagtctcg aggaaatcct tctccaggta gacctcgccg
      961 ccggcggtga tggtatgtcg tcccctggtg gtgctgaaca cgtcccgcaa gccatagatg
     1021 ttatcgccgg ccaggggacc ggtgatcgcg ttccccaggg tgaagaagtt agccacgctg
     1081 atctgcgcca gcgagggcgt tccctgtaca tcgaggtcgg aaccgaaggc cgccagcgac
     1141 tccgccggca tgctgatgcg tccagccgac atgcgcgagt agctcagcca ggcctggttc
     1201 accgaccgcg acgaaaccgt ccacacatcg ctcgcattgc cattctgctg ccgatagctg
     1261 taattggaaa gtgcccatcc cggcaggttg ctcccggtgg gcaatacgat ttgcgaaccg
     1321 agcgactgga agtagtcgag cgtcacatga tggttcggaa tcaattggaa atcgcccttg
     1381 atcagatact cgttcgatgt gttcggcagg ccctcatttc cgatgaagcg gttggtgatc
     1441 gcgttcgtgg gcaggggcac attcttggac agcaccgcgg cggcgaccgg gtcgggatgg
     1501 aa
//
LOCUS       DATAVD010000810         4512 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2498139, whole genome shotgun sequence.
ACCESSION   DATAVD010000810 DATAVD010000000
VERSION     DATAVD010000810.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4512
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2498139"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(194..862)
                     /locus_tag="VHX39_15505"
     CDS             complement(194..862)
                     /locus_tag="VHX39_15505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HEX3992575.1"
                     /translation="MNVLAPPKARLSVEIVYDLICPWCYLGVRRLLRTFRRRPDLLFD
                     LNWRPFLLNPDMPRVGMSRPDYVIRKFGGEDRAKRLYASITELGRREGVAFAFERIRR
                     TPSSIDAHRLVRFAARHGRADAVVEALFSVHFSEGYDIGDRAVLLAVAISCGLDDAET
                     KAFLASDDESDSVHADNLRAHRLGINGVPCFVIGGRHAIAGAQEPEVIERLLDVAAVD
                     ATEV"
     gene            1174..2133
                     /locus_tag="VHX39_15510"
     CDS             1174..2133
                     /locus_tag="VHX39_15510"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX3992576.1"
                     /translation="MTKPSAVQFLAAKALAFRSNDLFPSGTIIAGGALIAPVMMDRCA
                     QTVQGVRYPAKLGGIFLVGAFTVWLYSKFMPASSGADATLVDLILFGAATVSSIGGFA
                     FSALSGAVLFHTRMDNIEVVQTMLLSSIGIQLLMIATIWKSIDWRRFCRFLIGGLVGI
                     PCGLFVLLHVERHLFAAGFGALLCAYSAYVILRPPFVVSPRLAWLDPLIGFAGGITGG
                     AVAFPGAPVTAWCQLKGWTRDQQRGIYQPFILVMQIASLSLMSLVGKSAGHPGMVLHH
                     LNSVPPALAGALVGIYIYRKSTDRTFSVVINSTLFVSGLTLLF"
     gene            complement(2151..3041)
                     /locus_tag="VHX39_15515"
     CDS             complement(2151..3041)
                     /locus_tag="VHX39_15515"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3992577.1"
                     /translation="MDWDDVRVFLAVARTGTMRASGRALGLSQPTIARRLAAFEASFG
                     GPTLFDRLPEGLRLNAAGEQLLQPAEHVEDAMLTLERQRAATSAVLSGTVRIATGEAA
                     AGFLARGLSGSTAALPSGITLELVESRQTTNLARREADMALRHQPPESGDFYVSKAGT
                     FACAVYRRRGADAAAWVTYTEEQAHYAPALWVQRQVDETATKVALRASSMLMHLEAIR
                     AGTGRGVLPCYVGDGHPLLERLTAPIPEIAAEYWIIVHRDLRRAACVRAVIDWVKALF
                     AEQRNLLAGVLPDVPDAVHG"
     gene            3234..4088
                     /locus_tag="VHX39_15520"
     CDS             3234..4088
                     /locus_tag="VHX39_15520"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3992578.1"
                     /translation="MHSGTIRIIDISAEAAKLTMFRGRTPQTSFAEREGSATILGPYR
                     DGMLLLAKSDGTGHWETHPEDELLYVLDGTMTVDILDRDRVRTFEVGPGMLGFVPPGA
                     WHRVRFDEGATVLSATIPGDHIDLDIDDPRKGEHSTVQIETAMQSGAPTIIDLNAELA
                     RITMLRRTPDATAEDRKGSVARLASYRDGYVFAIKSSGIDHWESHLTGDELVFILDGS
                     ATLDSVGDDGPQTFVMRAGMLAVIPQGVWHRLKSAEGVSQLSVTPFPGEHIEVDVDDP
                     RTVSAMRG"
BASE COUNT          870 a         1266 c         1469 g          907 t
ORIGIN      
        1 cgtcatggcg cagccctccg ccttcgcaat gacgagcttt gtccgggcca ctgtgccggt
       61 tcggatgacg tggacaaacc gtgccatgag cggagggcga cgggtttcaa ctgttgagcg
      121 ggttggcatt gatttcgata aagcaaatat acgtcatcga tacgttcgtt gggatcagag
      181 tgagatccga cgattatact tccgtcgcgt ccactgcggc cacatccagc agccgttcga
      241 tcacttccgg ctcctgcgct ccggcaatcg cgtggcgtcc gccaatgaca aagcacggca
      301 cgccgttgat gcctaatcga tgggcacgaa gattgtcggc gtggactgaa tcggattcgt
      361 cgtcggacgc caggaaggcc ttcgtctcag cgtcgtccag cccgcaggag atggcgacag
      421 caagcaacac cgcgcggtcg ccgatatcgt agccctcgga gaaatgcacc gagaacaatg
      481 cctcgaccac cgcgtcagcc cggccatggc gcgccgcgaa ccgcaccaga cgatgcgcat
      541 cgatcgagga tggcgtgcga cggatgcgtt caaacgcgaa cgccacgccc tcacggcgac
      601 ccagttcggt gatcgaggcg tagaggcgtt tcgcgcgatc ctcgccgccg aatttacgga
      661 tgacgtagtc ggggcgggac atgccgaccc gcggcatatc cgggttcagc agaaacggcc
      721 gccagttgag gtcgaacagc aggtcgggcc ggcggcgaaa cgtgcgcagc aggcgacgaa
      781 cgcccaggta acaccagggg cagatgagat cgtagacgat ctcaaccgag agacgggcct
      841 ttggtggtgc gaggacgttc acaaacagat tttgccgtga atcgaggcga atgtcacgag
      901 ggattgcagt gggaggttgt agagccagct ttgacaccac ccgaagcgga acaactcagg
      961 aaccgatatt cggccgccaa cgccgatgcg ccgcgacgcg gcgacatcgt ttgcggccaa
     1021 gcggcagcag gcgaccaggg agatgccggc tctcccaggc ccgaatgcgg ctgttcatta
     1081 actccgtgaa atgccgggtt ggtgtgagcg atctcacaga caggcggata ccagcgccgg
     1141 taactgttga atgtacctgg gagacctgct gtgttgacga aaccatccgc ggttcaattt
     1201 ctggccgcga aggcgctcgc gttcagaagc aacgatttgt ttccctccgg gaccattatt
     1261 gccgggggtg cactcatcgc gccggtcatg atggaccgat gcgcgcagac cgtgcagggg
     1321 gttcgatatc cagcgaaact cggcgggata ttccttgtcg gcgcgttcac ggtatggctc
     1381 tacagcaagt ttatgccggc atcgtccgga gccgacgcga cactggtgga tctgattctg
     1441 tttggcgctg cgacagtctc cagcatcggc ggatttgcat tctcggcatt gtcgggcgca
     1501 gttttgtttc atacccggat ggacaatatc gaggttgtgc aaaccatgct gctcagcagc
     1561 atcggcatcc agttgctcat gattgcaacg atttggaaat cgatcgattg gcggcgattt
     1621 tgccgtttcc tgatcggtgg gcttgtcggc attccatgtg ggctgttcgt tttgctgcat
     1681 gtcgagaggc atctgtttgc cgccggcttt ggcgctttgt tgtgcgccta cagcgcttac
     1741 gtcatcctga gaccaccgtt cgtggtttcg ccgcggctgg cgtggctcga tccgttgatt
     1801 ggtttcgctg gcggcataac gggcggcgcc gtggcgtttc ctggcgcgcc ggtgacggca
     1861 tggtgtcaat taaagggttg gacgcgtgat cagcaacgcg gaatctatca accgttcatt
     1921 cttgtcatgc agatcgcttc gttgagtctg atgagtctgg tcggcaaatc agcgggtcac
     1981 cccggcatgg ttttgcatca tttgaattcg gttccgcctg ctttggccgg ggcgctggtc
     2041 ggtatctata tttatcggaa atccaccgac cgtacttttt cggttgtgat caattcgaca
     2101 cttttcgtct ctggactgac gttgctgttc tgatcgcgcc acatcggctg tcagccatgg
     2161 acggcatcag gtacgtcggg cagcacgccg gcgagcaggt tccgctgctc ggcgaataac
     2221 gccttgaccc aatcgatcac cgcccgcacg caggctgctc ggcgcaggtc ccggtgcacg
     2281 atgatccagt attcagctgc aatctcaggg atcggcgcag tcaggcgttc gagcaaagga
     2341 tggccgtcgc cgacatagca aggcagcacg cctcggccgg tcccggcgcg aatcgcctcc
     2401 agatgcatca gcatcgacga ggcccgcaat gccaccttcg ttgcggtttc gtcgacctgc
     2461 cgctgcaccc agagagccgg cgcataatgc gcctgctcct cggtataggt gacccaggca
     2521 gcggcatctg cgccacgccg acggtagacc gcacaggcga aggtgccggc cttggagacg
     2581 tagaagtcgc cactttccgg cggttggtgg cgcaacgcca tatccgcttc gcggcgtgcg
     2641 aggttggtgg tctggcgcga ttcaaccaac tccagagtga tgccggacgg cagggccgcc
     2701 gttgatcccg acaggccgcg agccaggaaa ccggcggctg cttcgccggt cgctattcgc
     2761 acggtgccgc tcaacactgc cgaagtggcg gcgcgctggc gttccagtgt cagcatggcg
     2821 tcctcgacgt gttcggccgg ttggagcaac tgctcgccgg cggcgttgag gcggagcccc
     2881 tcgggcagcc ggtcgaacag ggtcggcccg ccaaagctgg cctcgaatgc ggcgaggcgg
     2941 cgggcaatgg tcggttggct caggccgagc gcccgcccag aggcacgcat ggtgcctgtg
     3001 cgagcgacgg cgagaaagac gcggacgtcg tcccaatcca ttccgccggg tcgattcggg
     3061 agtctggtgg gagtgggagg tggtacggcg agaacttcca tagcagcttc ccctgaatgg
     3121 gatggtcagt catagcatgg tgccacgaaa acgttccagg ggtcgccaaa atcggcgatc
     3181 actgcaaaga aaatgtggcg ataagttgcg cggtgggaac cagggaggca gacatgcaca
     3241 gcggaaccat ccggatcatc gatatcagtg ccgaagctgc gaaactcacg atgtttcgtg
     3301 ggcgaacgcc gcagaccagc ttcgcagagc gcgaggggag tgcgacgatt ctcggaccgt
     3361 atcgcgatgg gatgctgttg ctcgccaaat ccgacggcac cgggcattgg gagacccatc
     3421 ccgaggacga actgctgtat gtgctcgatg gcacgatgac ggtggacatc ctcgatcgcg
     3481 atcgggtgcg aaccttcgag gttggcccag gaatgctggg ctttgtgccg cctggggcat
     3541 ggcatcgggt tcggtttgat gaaggtgcaa cggtgctgag cgcgacgatc ccgggcgatc
     3601 acatcgacct cgatatagac gatccacgaa agggcgagca ttcgacggtg cagatcgaga
     3661 cagcaatgca aagcggtgcg ccaacgatca ttgatcttaa cgcagaactt gcgaggatta
     3721 cgatgttgcg gcggaccccg gacgcgaccg cggaggatcg gaagggcagc gtggcccggt
     3781 tggcgtcgta ccgggacggt tatgtttttg cgatcaagtc ttcagggatc gatcactggg
     3841 agtcgcatct caccggggat gaactggttt tcatcctcga tggctctgcg acgctggaca
     3901 gcgtgggcga cgatgggccg cagacctttg tgatgcgagc gggcatgctg gcggtgattc
     3961 cgcagggagt ctggcaccgg cttaagtccg ccgagggtgt ctcgcaattg agcgtgacgc
     4021 cgtttccggg cgaacatatc gaggtcgatg tcgatgatcc tcggacagtt tcggcaatgc
     4081 ggggttgaat gggatcgccg ggacgaaggt cagattggct gttaaaagcg tgttttggag
     4141 gggagaccgg atccgacgag gggtcgatca attccgtcgg tgtatttgcg tgcattcgcg
     4201 tgaatctgcg gttccaataa ttcttgcgcg gcctgcaaag ccaggaagaa tggaaccgca
     4261 gattcacgcg aatgcacgca gatgcgccgc ttcgaggctg ctcgttgatt ccgatattcc
     4321 gtgaccttat cgatgtacga ttttggatgg cccctgaaat cagtcggcgg tcgagataag
     4381 gcgaccgcga aaggatcagc ttggaaccgg cgggcatgat gcgcgcggcg taggccattc
     4441 ccaaccggat gtcatcccga ttgacgctcc ccctggcgcg tgggactctc attcctaagc
     4501 cgctgaacgg ca
//
LOCUS       DATAVD010000811         5598 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3426989, whole genome shotgun sequence.
ACCESSION   DATAVD010000811 DATAVD010000000
VERSION     DATAVD010000811.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5598
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3426989"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..281
                     /locus_tag="VHX39_15525"
     CDS             <1..281
                     /locus_tag="VHX39_15525"
                     /inference="COORDINATES: protein motif:HMM:NF016310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aconitase X"
                     /protein_id="HEX3992579.1"
                     /translation="VVVPLLAVTSPQIKPDADRMGLTTRIEASGAMVLSGMCFYQSYA
                     REMAEANGWRRLATNSAKLTNILGGYGYAPVLLSMGQCLDAACSGRIP"
     gene            278..685
                     /locus_tag="VHX39_15530"
     CDS             278..685
                     /locus_tag="VHX39_15530"
                     /inference="COORDINATES: protein motif:HMM:NF014091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF126 domain-containing protein"
                     /protein_id="HEX3992580.1"
                     /translation="MIYQANAAIGRTVRGRALVASDGFSARYDLDRIIGVFSRPAHAL
                     YGRSYVGMVLILDRAKGGVATAWMLHEMAIRGVVPAALVLNTVNPIMVQGVALAEMTM
                     MSGFGLDITQAVPDGALVEVDAEAAAPVLRVLG"
     gene            749..823
                     /locus_tag="VHX39_15535"
     tRNA            749..823
                     /locus_tag="VHX39_15535"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:781..783,aa:Val,seq:cac)
     gene            complement(864..2477)
                     /locus_tag="VHX39_15540"
     CDS             complement(864..2477)
                     /locus_tag="VHX39_15540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX3992581.1"
                     /translation="MADDNVTQTQVEPPKAAAVGWEPELAELRERQALARELGGKDRV
                     ERQHAGGRLTVRERIDSMLDPGSFKEIGSIAGKASYDPKGNITGFIPGNCVFGRGTVD
                     GRPVVIAGDDFTLRGGSADASIKGKPKMSEEIATQFRMPIIRLIEGSGGGGSVKTIET
                     TGRANLPGGLTETTSFDLVANQMAQVPVVGLGLGSVAGLGAARLVASHYSVMVKEIAA
                     VFVAGPPVVERLGEPRSKQELGGWQIQLRCGAVDHAVDTEEQAFDAARQFLSYLPSSI
                     HDVPPRVRGWDNPTRRDESLITAIPKVKKQAYHMRRIIKSVFDKDSFFEMGALFGRSI
                     ITGFARLDGWPVAVMAGDPLFDGGAWTADACNKIIRFVDMAQTFHLPVVHLVDCPGFQ
                     VGLRAESNAVIRWGVRALSAINQTTVPWCSIIVRNCYGVGGLGHQPVGHLCLRYAWPS
                     ASWGSLPLEGGIEAAYRAEIDAAPDPAAKLEEIEQRLNQLRSPYRTAESFWVDEVIDP
                     RDTRKLLCDFATLAAPLRTPGPSVFGMRP"
     gene            complement(2565..3536)
                     /locus_tag="VHX39_15545"
     CDS             complement(2565..3536)
                     /locus_tag="VHX39_15545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3992582.1"
                     /translation="MNQRFPLSDHYDGRHFFNPGLQRPARGLLEVLRWRLRGARAAWP
                     NHVTNSVFPAPPHTVEPGSVAITFINHATFLIRLPGAVVLTDPIFSERCSPVSWAGPK
                     RARPPGIAFADLPRPDVVLLSHNHYDHMDFPTLRALQARYSPSFVTTLGNARTLAKMG
                     ITAIELDWWQDTMAETLRITATPARHFSARTPFDRNRTLWGGFMIGTGAGMVLFAGDS
                     GAGPHWADIRMRLGAPDVALLPIGAYEPRWFMAPVHMNPAEAVEAQLALGARHAVGMH
                     FGTFQLTDEAIDAPLHALDAALGSTETETFKALGFGETRIYQLGQHP"
     gene            3638..4648
                     /gene="dctP"
                     /locus_tag="VHX39_15550"
     CDS             3638..4648
                     /gene="dctP"
                     /locus_tag="VHX39_15550"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HEX3992583.1"
                     /translation="MRLLTRRALAAGVLSLPAIRRVRADTPIRLRCSLDTAPTHGRNI
                     SIGDYLAKVEAASKGRLKTEIFASGQLFADLNVTKALVQGQVDMAAPGTWAITNFVPD
                     SDVFQLPTLYDEPVEVIHRVTDGRSGALIANEVELKLRSHVLGSWIDNGFSNWFTTHT
                     PLTSLADLKGLKIRNSGGSGQSWRTRFFDAVPNVTAWPDVPLALSQGTFDGLITTNES
                     IVSVKLWEAGVRFGLQDHNSFAAYIPMVSHSFWAALPADLQTIMTELWAENIGRYRTN
                     MAAAQDRARGTMESHGVKIADITPAQANEVRHRMLKDQEAVAKEMRVSPDIQKLLAQD
                     VV"
     gene            complement(4664..5485)
                     /locus_tag="VHX39_15555"
     CDS             complement(4664..5485)
                     /locus_tag="VHX39_15555"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX3992584.1"
                     /translation="MLLCDPNDVEGITRLFNDHKDIAAVILEPTGASFGKMPILPSFL
                     TLLRDLTKQAGTILIFDEIVTGFRVSPGGAQAALGITPDMTTLAKIMAGGLPGGVVTG
                     RKDIMDWLDFKVTKAAGQEKISHQGTFNANPVSAAAGIATLEIIATTDACARANAFGE
                     AVRMKMNEVLEEEKLKWAVHGSYSGLHVYTNSDGADIVPGRFDAVPFISKMLNKPRGE
                     GVSGQLRVGMLVNGVDMNSGPSAWISATHGPEEMAITVDAFRTTIRALKREGMAS"
BASE COUNT          949 a         1654 c         1907 g         1088 t
ORIGIN      
        1 gggtcgtggt gcctttgctg gcggtcacca gcccgcagat caagccggat gccgatcgga
       61 tgggtctcac cacccgtatc gaagcgtcgg gggccatggt cctgtcgggt atgtgctttt
      121 accagagcta tgctcgtgaa atggctgagg cgaatggctg gcggcggctg gcgaccaatt
      181 ccgccaaact gaccaatatc ctgggtggtt atgggtatgc gccggtgctg ctgtccatgg
      241 ggcagtgtct cgacgcggcg tgttcggggc gaatcccatg atctaccagg caaacgcggc
      301 gatcggtcgc acggtgcgcg ggcgggcgct ggtggcgagc gacgggtttt cagcgcggta
      361 tgatctggac cggatcatcg gggtgttctc gcggcccgcg cacgctttgt acggtcggtc
      421 ttatgttggg atggtgctga tcctggatcg ggcaaaaggc ggtgtggcga cggcctggat
      481 gctgcacgag atggccatcc ggggggtggt gccggcggct ttggtgctca acacggtgaa
      541 tccgatcatg gtgcaggggg tggcgctggc ggaaatgacg atgatgtcgg gctttgggct
      601 ggatatcacg caggcggtgc cggatggcgc gctggtcgaa gtggacgcgg aggcggcggc
      661 tccggtgttg cgggtgctgg ggtaggcgat ttcggggttg cggcgggtcg gccgaaaggg
      721 taggaagcgc gccttcgccg agacggatgg gcgcgtagct cagcggtaga gcattcgctt
      781 cacacgcgag aggtcacagg ttcaatccct gtcgcgccca ccatcctcct tcacaatcag
      841 cgattcggcc ccgactttcg cggttatggc cgcatgccga ataccgatgg gcccggtgtg
      901 cgcaacggcg ccgccagggt ggcgaagtcg catagcagtt ttcgggtgtc gcgcggatcg
      961 atgacctcat ccacccaaaa tgattccgcg gtgcgatagg gggagcgcaa ctggttcagg
     1021 cgttgctcga tttcctccag tttcgcggcc ggatcggggg cggcgtcgat ctcggcgcga
     1081 taggctgcct cgatcccgcc ttccaacggg agggagcccc aactggccga cggccacgca
     1141 taccgcaggc acagatgacc gacgggctgg tggcccagtc cgccgacgcc gtagcagttg
     1201 cgcacgatga tgctgcacca ggggacggtg gtctggttga tcgccgacag cgcgcgtacg
     1261 ccccagcgga tgacggcgtt gctttcggcc cgcaacccga cctggaagcc ggggcagtcc
     1321 acgagatgga ccacgggcag gtggaacgtc tgtgccatgt cgacgaagcg gatgatcttg
     1381 ttgcaggcgt cggcggtcca ggcgccgccg tcgaatagcg ggtcgccggc catcaccgcg
     1441 accggccaac cgtccaggcg ggcgaagccg gtgatgatgg agcgtccgaa cagcgctccc
     1501 atctcgaaga agctgtcctt gtcgaacacc gacttgataa tccgccgcat gtggtaggcc
     1561 tgcttcttca ccttggggat ggcggtgatc agcgattcgt cacggcgggt tgggttgtcc
     1621 catcccctga ctcgcggcgg cacgtcatga atggaacttg gcagatatga caggaactgg
     1681 cgtgcggcat cgaatgcctg ttcttccgta tcgacggcgt gatcgacggc gccgcaacgc
     1741 aactggattt gccagccgcc aagttcctgc ttcgatcggg gctcgcccag ccgttccacc
     1801 accggagggc cggcgacgaa gacggccgcg atttccttta ccatcacgga ataatgagag
     1861 gcgacaagcc gagcggcgcc caggccggcg actgagccga ggccgagacc gactacgggg
     1921 acttgcgcca tctggtttgc caccaggtcg aatgacgtgg tctcggtcag gccgccgggc
     1981 aggttggctc ggcctgtcgt ttcaattgtc ttgactgaac cgccgccgcc ggatccttcg
     2041 atcagacgaa tgatcggcat gcggaattgt gtggcgattt cctccgacat cttgggcttg
     2101 cccttgatgg aggcatcggc cgacccgcca cgcagggtga aatcgtcgcc cgcgatgacg
     2161 accggccggc catccaccgt gccgcggccg aagacgcagt tgccggggat gaagccggtg
     2221 atgttgcctt tcgggtcgta gctcgccttg ccggcgatgc tgccgatttc cttgaagctg
     2281 ccgggatcca gcatgctgtc gatccgttct cgcactgtca ggcggccgcc ggcgtgttgg
     2341 cgttccaccc ggtccttgcc gccgagttcg cgtgccaggg cctggcgttc ccgcagttcg
     2401 gcgagttcgg gttcccaacc gacggctgcc gctttgggcg gttcaacctg ggtttgggta
     2461 acgttatcgt cggccatgcg tttcctgtcc gtcttcattc ttcaatcgat taccgaccgg
     2521 taggctatgg gcgatcgctt ttggacgcaa tgcaggcgga cgggttatgg gtgctgcccc
     2581 agttggtaga tacgggtctc gccgaacccc aatgccttga aggtttctgt ttcggtggac
     2641 ccgagcgccg cgtccagtgc atgcagtggc gcatcgatcg cttcatcggt gagttggaac
     2701 gtgccgaaat gcattcccac cgcgtggcgc gcgcccagcg ccaattgtgc ttcgaccgct
     2761 tcggccgggt tcatgtggac tggcgccatg aaccatcgtg gctcgtaggc accgatcggc
     2821 agcagggcga cgtcgggtgc gccaaggcgc atccggatat cggcccaatg ggggcccgcg
     2881 ccggaatcgc ccgcgaacag caccatgccg gcgccggtgc cgatcatgaa gccgccccat
     2941 aatgtgcgat tgcggtcaaa cggggtgcgt gcggaaaaat gccgagccgg ggtcgcggtg
     3001 attcgcagtg tctcggccat cgtgtcctgc caccagtcca gttcgatggc agtgatgccc
     3061 atttttgcta gcgtccgtgc attgccgagt gtggtgacga agctcgggct gtagcgggcc
     3121 tgcagcgcgc gtaatgtggg gaaatccatg tggtcgtaat ggttgtgtga tagcagcacc
     3181 acgtccgggc gaggcaggtc ggcaaaggcg ataccgggtg gccgtgctcg cttggggcca
     3241 gcccaggaga cgggtgagca gcgctcgctg aagatcggat cggtcaagac caccgcgcct
     3301 ggcaggcgga tcaggaaagt ggcgtgattg atgaaggtga tggcgacact gcccggttcc
     3361 actgtgtgcg gcggtgctgg aaatactgag ttcgtgacgt ggttgggcca tgcggcccgt
     3421 gctcctcgca gccgccagcg cagcacctcc agcagcccac gcgccggcct ttgcaggccc
     3481 gggttgaaaa aatgccgccc atcatagtgg tcggagagcg ggaagcgctg gttcatgccg
     3541 gacggagatg gtgtcgctgt ccggcattcg ccagacgctg gcgcatatga gccagatctg
     3601 gcagatttcc ggcaaataaa cgtccgagga atccgctatg cgcttgttga cccgtcgagc
     3661 cctcgcggcc ggcgtgctgt cccttcccgc cattcgccgt gttcgggccg atacgccgat
     3721 ccggctgcgc tgctccctgg atacggcacc aacccatggg cggaacatct cgatcggcga
     3781 ttatctggcg aaggtggagg cggcgtcgaa ggggcggctg aagaccgaga tttttgccag
     3841 cgggcagttg ttcgctgacc tgaacgtgac caaggccctg gttcagggac aggtcgatat
     3901 ggcggcgccg ggcacctggg cgatcaccaa ttttgtcccg gactccgacg tgttccagct
     3961 tcccacgctg tatgatgagc cggttgaggt tatccatcgg gtgaccgacg gccggtccgg
     4021 agcattgatc gcgaacgagg tcgaactgaa gctccgtagt catgtgcttg ggtcctggat
     4081 cgataacggc ttcagcaact ggttcacgac gcacacgccg ctgacgtcgc tggccgacct
     4141 gaaagggttg aagatccgga actcgggtgg ctccggccag tcctggcgga cccggttttt
     4201 tgatgcggtg ccgaatgtga cggcctggcc ggacgtgccc ttggcgctgt cgcaggggac
     4261 gttcgacggg ctgatcacga cgaacgagag tatcgtcagc gtgaagcttt gggaggctgg
     4321 ggtgcgcttc gggctgcagg accacaactc cttcgcggcc tatatcccga tggtcagcca
     4381 cagcttctgg gccgcgttgc cggccgatct gcagaccatc atgacggagt tgtgggccga
     4441 gaatatcggg cgctatcgca ctaacatggc cgccgcccag gaccgggcgc gcgggacgat
     4501 ggagagccat ggggtcaaaa tcgcagacat cacgccggcg caggccaacg aggttcgcca
     4561 ccgcatgctg aaggaccagg aggcggtggc gaaagaaatg cgggtcagcc ccgacattca
     4621 gaagctgttg gcgcaggacg tggtgtgagg gcgacggaag ccgctacgac gccattccct
     4681 cgcgcttcaa cgcacgaatg gtcgtgcgaa aggcgtcgac ggtgatcgcc atttcctccg
     4741 gcccgtgcgt cgccgagatc caggccgatg ggccggagtt catatcgacg ccattgacca
     4801 gcatgcccac gcggagctgg ccggatacac cttctccgcg cggcttgttg agcattttgg
     4861 aaatgaacgg caccgcatca aaccggccgg gaacgatgtc cgccccgtcc gaattcgtat
     4921 agacgtgcag cccggagtag gagccgtgga cggcccactt caatttttcc tcttccagga
     4981 cttcgttcat cttcatgcgg accgcttcgc cgaacgcatt ggcccgagca caggcatcgg
     5041 tggtggcgat gatttcgagc gtcgcgatac cggcggcggc ggaaaccggg ttcgcattga
     5101 acgtgccctg atgtgatatt ttttcttggc cggctgcctt ggtcaccttg aagtccagcc
     5161 agtccatgat gtcctttcgc ccggtcacga ccccgccggg cagaccgccg gccatgatct
     5221 tggccagtgt agtcatgtcc ggggtgatcc ccaatgccgc ctgcgcgccg cccggagata
     5281 cccggaagcc ggtcacgatc tcatcgaaga tcaggatggt gcccgcctgc ttcgtgaggt
     5341 cccgcagcag ggtcaggaag gacggcagga tcggcatctt gccgaaactc gcgccggtcg
     5401 gttccaggat gactgcggcg atgtccttgt ggtcgttgaa gaggcgggtg atgccctcga
     5461 cgtcgttggg atcgcacagc agcacgctgt cggcgatacc attcaccacg ccgctggtcg
     5521 ctgttccatc gtaatgattg gcctggccgc tggtcatatg gtcgtgccag ccatggaaat
     5581 ggccgcggaa ccgcacca
//
LOCUS       DATAVD010000812         2450 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1193143, whole genome shotgun sequence.
ACCESSION   DATAVD010000812 DATAVD010000000
VERSION     DATAVD010000812.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1193143"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(260..>2450)
                     /locus_tag="VHX39_15560"
     CDS             complement(260..>2450)
                     /locus_tag="VHX39_15560"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3992585.1"
                     /translation="PGVVYDVPFNTTRFVQASIAEVYKTLLEAAVLVLVVILVFLQDW
                     RAMLVPATTVPVTIIGAFAAMSALGFTVNLSTLFAIVLAIGIVVDDAIVVVEGASHHI
                     ERGLSPHDAAIKAMGELFGPIIGITLVLMSVFIPAAFLPGLTGQMYAQFALVIAATAI
                     ISAINAATLKPTQCALWLRVPVPPERRNFFYRGFNRLYDPVERGYLRVVGGMARLSGM
                     MVVLAILLATAGVWGVARLPTAFIPIEDQGYFVIAVQLPDGAALGRTQHALGEVSKAV
                     LAAPGVDHAVAISGISPLDNNASLQNAGAVYVVLKDWSQRGSGTGADLRSLYFALQAS
                     LDKIPDASCLVLIPPPIQGIGNASGFTMQVELRDGSFDFAKLERLTHTIIAAGSTQSA
                     LQHLGSSFRSGVPQVELVVDRVKAETLNVSVGDIFNVLSGYVGSSYVNQFNKFGRTYQ
                     VYVQADSKYRLRPKDIENLYVRSQNGNMVPLGTLVTLRETVGPSLIGLYNLYPTASVV
                     GASGQGFSSGESIDVMEQIADQTLPGGSGYEWTAMSYQEKQVGNQIVYVFGFALLLVY
                     LCLAGQYESWIAPLSVILAVPLSLIGPAIALTGLGVANNLYTQIGLVLLIALSAKNAI
                     LIVQVARERRVIDGEPILTAAVDAARTRFRPIIMTSFAFILGVVPLLTATGAGASARG
                     SLGLSVVTGMLASTCLAVLFVPSFFVILQRFEEWWTGRSAAVTQRTA"
BASE COUNT          563 a          775 c          684 g          428 t
ORIGIN      
        1 tcaatgtctc gacggcatga tcggcctccg ttgcgtagtc catcggtcgt ttcgcctcga
       61 gcctccccag ggaccacgca aagttgcagc caattcaccg gcctcgcggg caagttcgat
      121 ggcaaacgcg tggcgggcgg ccagcgcggc gctcatggtt tcgtttccat atccagcggt
      181 cgcgccgcgc ctgacaaccg cggaatggca acctggtctt ttgcgctggt cgggcagggg
      241 taacgcaacg agcggacgct catgccgtgc gttgcgtgac ggcagcactt ctacccgtcc
      301 accactcctc gaacctctgc agtatcacga agaacgacgg cacaaacaat acagcgaggc
      361 aggttgaagc aagcatcccg gtcaccaccg acaagcccaa agacccgcgc gcacttgcgc
      421 ctgcaccagt tgctgtcagc agcggtacca cgccgagaat gaatgcaaac gaggtcatga
      481 tgataggacg gaaccgtgtg cgcgccgcat cgacggccgc ggtgaggatc ggctcaccgt
      541 caatgacacg ccgttcacgc gccacctgca caatcagaat ggcatttttc gcactcaatg
      601 cgatcaacag cacgaggcca atctgcgtgt aaagattgtt ggccacgccc agaccggtca
      661 acgcaatggc cggcccgatc agcgagagtg gcaccgccag gatcacgctc aacggcgcaa
      721 tccagctttc atactggccc gcgaggcaca gatagaccag cagcagagcg aacccgaaaa
      781 cataaacgat ctggttgcca acctgttttt cctggtacga catggcggtc cattcgtatc
      841 cgctgcctcc cggcagagtc tgatcggcaa tttgctccat cacatcgatg gattcaccag
      901 aactgaaacc ttgcccggat gcaccgacga ccgacgcagt tggatacaga ttatacagac
      961 cgatcagcga cggcccgact gtctcccgca atgttaccag cgttcccaac ggcaccatgt
     1021 tgccattttg gctgcgcaca tacaggttct cgatgtcctt gggccgcagc cgatacttcg
     1081 agtcggcctg cacgtatacc tgataggtgc ggccaaattt attgaactga ttgacgtagc
     1141 tcgagccaac gtagccgctc aacacattga atatgtcgcc gaccgagaca ttcagcgtct
     1201 ccgccttgac gcggtcaacc accagctcaa cctgcggaac acccgagcga aacgacgaac
     1261 ccaaatgctg cagtgccgac tgcgtgctgc cggccgcgat gatggtgtgg gtcagccgct
     1321 ccagcttggc aaaatcgaaa ctgccatcgc gcagttcgac ctgcatggtg aagccgctcg
     1381 cgttgccgat gccctggatc ggtggcggaa tcagaaccag gcagctggca tcggggattt
     1441 tgtccagaga ggcctgcaac gcgaagtaga gcgatcgcag atcggcgccg gttccactgc
     1501 cacgctggct ccagtccttc aggacgacgt aaactgcacc ggcattttgc aatgacgcat
     1561 tgttgtccag cggggaaatc ccggaaatcg caacggcatg atcgacgccc ggggcggcca
     1621 gcacagcctt gctgacttca ccgagcgcat gttgcgtgcg gccaagcgcg gcgccatcgg
     1681 gaagctggac ggcgataacg aaatagccct gatcttcaat tgggatgaac gccgttggca
     1741 gccgtgcaac gccccagaca ccggcagtgg ccagtagaat ggccagaacg accatcatcc
     1801 cgctcaaccg cgccatgccg cccaccaccc gcaggtagcc tcgctccacc ggatcgtaca
     1861 gccggttaaa tccacgatag aaaaagttgc gacgctccgg tggaaccggt acccgcaacc
     1921 acaaggcaca ctgcgtcggc ttcaatgttg ccgcgttgat cgcgctaatg atcgccgtag
     1981 ccgctatgac caacgcaaac tgggcgtaca tctgtcctgt caggccaggc aggaacgctg
     2041 ccggaatgaa caccgacatc aataccaatg tgatgccgat gatcggacca aacaactcgc
     2101 ccatcgcttt gatggcggca tcgtgcggcg acaatccgcg ctcgatatgg tgcgaggcgc
     2161 cttccaccac gacgatcgcg tcatcgacga cgatcccaat cgccagcacg atcgcgaaca
     2221 gcgtcgaaag attgacggta aagccaagtg ccgacatcgc agcgaaagca ccgatgatgg
     2281 tgaccggcac ggtggttgcc ggcaccagca tggcgcgcca gtcctgcagg aaaaccagga
     2341 tcacgaccag cacaaggacc gctgcttcga gcagggtttt gtacacttcg gcgatcgatg
     2401 cctgcacgaa gcgcgtggta ttgaagggca catcgtaaac cacacctggc
//
LOCUS       DATAVD010000813         3128 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3427083, whole genome shotgun sequence.
ACCESSION   DATAVD010000813 DATAVD010000000
VERSION     DATAVD010000813.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3427083"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            107..772
                     /locus_tag="VHX39_15565"
     CDS             107..772
                     /locus_tag="VHX39_15565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992586.1"
                     /translation="MTVASYSGNAADNAIGLIACSRHQSPSYMPWAQHTPKMDFINPV
                     DGGPALDWMRKNIGFEATRYSRTYLRFWDSEQWTGHTALFVRLGGQAAFAEGWVPQVG
                     VKSYFTTLVQGGEAPGEWQNDLPMIEDPTCISLEFPVTQVQASGLVSYWRDVARGGFT
                     TYSFEVLGEGRCNCVWASTNVLRAYAESNGIAEVAAAMRKVTSPVQGKLMGQIMGGEL
                     LAA"
     gene            complement(991..2139)
                     /locus_tag="VHX39_15570"
     CDS             complement(991..2139)
                     /locus_tag="VHX39_15570"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyalkane--coenzyme M transferase"
                     /protein_id="HEX3992587.1"
                     /translation="MLTSTDRILVTHVGSLPRNETLSDLLIRQEAGEAIDASALDREI
                     EAATAKTVQEQVKAGVDIGNDGEQSRVGFQTYVPRCMCGFGGESRRPPATDQLEFPSY
                     VRQTAARFPHTARLVNAPAALSEVRYVNATPIKDDAARLIRLGGEFRECFMTAPSPGI
                     VATTMINQFYDSHEAYLMALAAALAHEYREIYDAGLVLQIDSPDLAMERHRFFGQLNE
                     AEFLRQLELHVAAINRAIEGIPRDRIRLHVCWGNSDSPHTHDIAMATILPALYKANVG
                     ALSIEFANPRHQHEYDALRSNPLPKEMLLIPGVLDTTTNFVEHPELVARRLAEAVSVV
                     GDRERVIAGTDCGFGTFAGREYVAHEVVWAKLAAAAEGARIASARLWG"
     gene            2359..>3128
                     /locus_tag="VHX39_15575"
     CDS             2359..>3128
                     /locus_tag="VHX39_15575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992588.1"
                     /translation="MDLQSAFTFQELLTFVISDMAKAISERSGETEEQHFARSRAAAH
                     MILGFLPRDVIEAMLAGHCVMLHEVMTADAHDTLHGEADPQRRRPRSNIVGLNRAFND
                     TLGRLERHQQRPAVGSRDAVDVQPSAEPHLTPNVQPESTDASQPKPVAPMLNRAARRQ
                     AARAENRAAVTASRAAPRFGVVTPQPTVPRADPMEIAGLGSPSPEAIAACNANPEAMA
                     ALKSGDPAGFGRAMGIADPCEAFLAAAKTKGSPFDQLAS"
BASE COUNT          590 a          999 c          982 g          557 t
ORIGIN      
        1 gacgagatcg cgccgcccga gggatgatgc cgcgcccgat ttgttcgggc gagggccagc
       61 ggagaccatc tccgctaccc tgcatcaaca ccggagaacg ggaacgatga cggttgcaag
      121 ctacagcggc aatgccgcag acaatgccat cgggctgatt gcctgttcgc gccaccaatc
      181 ccctagctac atgccctggg cgcagcacac gccgaagatg gatttcatca atccggttga
      241 cggcggaccc gcgctggact ggatgcgcaa gaatatcggc ttcgaggcaa cccgctattc
      301 gaggacctat ctcaggttct gggacagcga gcagtggacc gggcacacgg ctctgtttgt
      361 gcggcttggc ggccaggcgg cattcgccga aggctgggtg ccgcaggttg gcgtcaaaag
      421 ctatttcacc acgctggtgc aaggcggcga ggcacccggc gagtggcaaa acgatctgcc
      481 gatgatcgag gatccgacat gcatcagtct cgagttcccg gtgacccagg tccaggcctc
      541 ggggctggtg agctattggc gcgatgtggc acggggcggc ttcacgacct atagcttcga
      601 ggtgcttggc gagggacgct gcaactgcgt ttgggcgtcg accaacgttt tgcgcgccta
      661 tgccgaaagc aacggcatcg ccgaggtggc cgctgcgatg cgaaaggtga cctcgcccgt
      721 gcagggcaag ctgatgggac agatcatggg aggcgaactg ctggctgcat gaatggcgat
      781 gtgcggcatg cagcagtgcc cagaaacatt gaattgtgcc acactcatcc gtcatccccg
      841 gacttgttcc ggggaccgat cgcggcaagg tgctgatgtt ggtcaccgtg acgagcacgg
      901 tgatgacgaa aggggaatcg cgagtcacgc tcgactgatt ttgaatgtca gaacgcccga
      961 cctaaatcct cgagccgtcc tctcaacagg tcagccccac agccgggccg acgcgatacg
     1021 tgcgccttct gccgctgccg cgagtttggc ccagacgacc tcgtgggcca catactccct
     1081 gccggcgaat gtgccgaaac cgcaatcggt gcctgcgatc acgcgctctc gatcgccgac
     1141 cacggacacc gcttcggcga ggcggcgtgc gaccagctcg ggatgttcga cgaagttcgt
     1201 tgtggtatcg agcaccccgg gaatcagcag catttctttc ggcaacggat tgctgcgcaa
     1261 cgcgtcgtat tcatgttgat gccgaggatt ggcgaactcg atcgacagcg ctccgacatt
     1321 ggccttgtag agcgccggca gaatggtcgc catcgcaatg tcgtgagtgt gcggggaatc
     1381 gctgttgccc caacaaacat ggagcctgat cctgtcgcgc ggaattccct cgatcgcgcg
     1441 attgatggcc gcgacatgga gttcgagttg cctgagaaat tcggcttcgt tgagttggcc
     1501 aaagaaccga tgccgttcca tggcgagatc cggactgtcg atctgcagca ccagaccggc
     1561 gtcataaatc tcgcgatatt cgtgcgccag cgccgctgcc agcgccatca gataggcctc
     1621 gtggctgtca taaaattggt tgatcatcgt cgtcgccacg atccccggtg agggtgcggt
     1681 catgaagcat tcgcgaaact ctccaccgag gcgtatcagc cttgccgcat catccttgat
     1741 cggcgtggcg ttgacgtaac gaacctccga cagcgccgcc ggcgcattga ccagccgtgc
     1801 cgtatgcgga aaacgcgccg ccgtctgcct gacataactc gggaattcga gctgatcggt
     1861 cgccggaggg cgtcgcgact cgccgccaaa accgcacatg catcgcggca cgtaggtttg
     1921 gaagccaacc cgggattgtt ccccgtcgtt accgatgtcg acaccggcct tgacctgttc
     1981 ctgaacggtt ttggcagtgg cagcctcgat ctctcgatcg agcgcggagg catcgatcgc
     2041 ctcgccggct tcctggcgga tcagcaggtc cgacaaggtt tcgttgcgcg gcaggctgcc
     2101 gacatgagtg accagaatgc ggtcagtgct cgtcagcatg ggcgtctccc gatttgcacc
     2161 ggctggttcc ggtgactggc cgtctggagg gcagagtagc cagcgtccat gggtcttaca
     2221 acggcaaggc cgaaccgggg accgcatcgg ccgccggcga aatagtccga tgattgcggc
     2281 gggagtcgct ccgatgttcg ttgacgcgcc tgtccgtgag acatactaac gaacccctca
     2341 acccgaggcg gccgcgtcat ggacctgcag tcagcgttta cgttccagga gctcctgacc
     2401 ttcgtcatca gcgacatggc gaaagccatc tccgagcgca gcggcgagac cgaggaacaa
     2461 cacttcgccc gctcccgcgc cgccgcgcac atgattttgg gttttctgcc gcgcgacgtg
     2521 atcgaggcca tgctcgccgg ccactgcgtc atgttgcatg aggtcatgac cgccgacgcc
     2581 cacgacacgt tgcacggcga ggccgacccg caacgccgcc gcccgcgtag caacatcgtc
     2641 gggctgaacc gggcattcaa cgataccctc ggccggcttg agcgccatca gcaacgcccc
     2701 gccgtaggct cgcgcgacgc ggtggacgtg cagccgtcgg ccgaacccca cctcacgccc
     2761 aatgtccaac cggaatccac cgacgcgtca cagccgaaac cggtggcgcc aatgctgaac
     2821 cgggcggccc gccgccaggc agctcgcgct gagaaccgag ccgccgtaac agcgtcccgt
     2881 gccgccccca ggttcggcgt cgtaacgcca cagccgaccg tcccgcgggc ggatccgatg
     2941 gagattgcgg gcctcggttc gccctcgccg gaggcaatcg ccgcctgcaa tgcgaacccc
     3001 gaggcgatgg cggctctcaa atccggcgat ccggccggtt tcggccgcgc catgggcatc
     3061 gccgacccgt gcgaggcgtt tctggccgcc gccaagacca aaggaagccc gttcgatcag
     3121 ttggcatc
//
LOCUS       DATAVD010000814         2171 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_262876, whole genome shotgun sequence.
ACCESSION   DATAVD010000814 DATAVD010000000
VERSION     DATAVD010000814.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_262876"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..862)
                     /locus_tag="VHX39_15580"
     CDS             complement(<1..862)
                     /locus_tag="VHX39_15580"
                     /inference="COORDINATES: protein motif:HMM:NF039283.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalase-like domain-containing protein"
                     /protein_id="HEX3992589.1"
                     /translation="MSTPLEDYALIGDGETAALVSREGSIDWLCWPRFDSDACFAALL
                     GTAEHGRWLIGSEDGTASACGRRYQPDTLVMETDLSMAGGKARLIDFMPLREQGSALI
                     RIVEGLHGTCHLRMDLRLRFDYGSMPPWIEAKDDGFVATVGPDRVVLCSPVPIELQDH
                     TARAAFTVTSGQRLAFILRHHDSGQAAPPSLDAAAALERTQTFWRDWIGRFDDRKTRW
                     PDAVRRSLITLKAMIHRPTGGLVAAPTTSLPEAPSGKKNWDYRYCWLRDSTFTLGALL
                     NAGYHDEATRW"
     gene            complement(859..1866)
                     /locus_tag="VHX39_15585"
     CDS             complement(859..1866)
                     /locus_tag="VHX39_15585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3992590.1"
                     /translation="MRKVVAITGAGAGVGRATVVEFARAGCDLALLSRDPGRLEDAAQ
                     EARAFGVRALAIPTDVADAEAVEAAATRIEDELGPMVIWVNVAMATVFAPVSRLTAAE
                     VQRATAVTYFGQVHGMMAALRRMTTRNRGSIVNVGSALAYRSVPLQSVYCGAKFAIRG
                     FTDSLRSEILHDKLAITLTMVDLPAVNTPQFNWALNKTGQRAQPVPPIFQPEVAARAI
                     CFAAFHPRRQTWIGFPTVKAILANRIVPGLLDRYLAKAGYTGQLTNEPSPTDAPNNLF
                     QPVAGDYGAHGRFDAKARATSWETITSRHRNAMWATIGLATLIGLQRLARHIDIRWVR
                     R"
     gene            complement(1971..>2171)
                     /locus_tag="VHX39_15590"
     CDS             complement(1971..>2171)
                     /locus_tag="VHX39_15590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992591.1"
                     /translation="APFIGIAMAVLVALTFMRLGGNRGLPSIFALAGVFWLFVMLGLG
                     GLDSFTRHDLATRPDTVTQPAR"
BASE COUNT          415 a          698 c          664 g          394 t
ORIGIN      
        1 gccaccgcgt tgcctcgtca tgatacccgg cgttgagcag ggccccgagg gtgaacgtcg
       61 aatcgcgcag ccagcaatag cggtaatccc agtttttctt gccactcggc gcttcgggaa
      121 gcgatgtcgt gggcgccgcc accagcccgc cggtgggtcg atggatcatt gccttgagcg
      181 ttatcagcga gcgccgcacc gcgtccggcc atcgtgtctt acgatcgtca aaacggccga
      241 tccagtctcg ccaaaacgtt tgcgtccgtt cgagcgcggc ggccgcgtcg agcgacggag
      301 gcgcggcctg cccggagtcg tgatggcgca aaatgaacgc caggcgctgt ccggaggtaa
      361 ccgtgaacgc cgcccgcgcc gtgtggtcct gcagctcaat tggaacaggt gagcacaaga
      421 cgacccgatc cggcccgacc gtcgcgacga agccgtcatc cttcgcctcg atccagggag
      481 gcatgctgcc gtagtcgaaa cgcagtctca ggtccatgcg taagtgacac gttccgtgca
      541 gtccctcaac gatgcggatc agcgccgagc cttgttcacg caatggcatg aagtcgatca
      601 ggcgcgcttt tcctccggcc atcgacaggt cagtttccat caccagcgtg tccggttgat
      661 atcttctgcc acacgcgctc gcggtgccgt cttcggaccc gatcagccaa cgtccgtgct
      721 ccgctgtgcc caaaagcgcc gcgaagcatg catcgctatc gaacctgggc cagcaaagcc
      781 aatcgatcga cccctcccga cttaccagcg cggcggtctc accatcgcca atcagagcgt
      841 aatcttcgag cggcgtgctc accgcctgac ccagcgaatg tcgatgtgcc tggccaatcg
      901 ctgaagcccg atcaaagtcg ccagtccgat cgtcgcccac atggcattgc gatgcctgct
      961 ggtgatcgtt tcccaactgg tggcgcgcgc tttggcgtca aagcgcccat gcgcgccata
     1021 atcgcctgct accggctgga acagattgtt aggtgcgtcg gtcggtgacg gctcgttggt
     1081 gagttgccct gtataacctg ccttggcgag atagcgatcg agcaggccag gcacgatgcg
     1141 attggcgagg atcgccttga ctgtcggaaa cccgatccat gtttgcctgc gtggatgaaa
     1201 ggccgcgaaa cagatcgcgc gtgccgcgac ttccggctga aaaatcggtg gaaccggctg
     1261 agcccgctgg ccggtcttat tcaatgccca attgaattgc ggtgtgttca ccgccggcaa
     1321 atccaccatg gtgagcgtaa tcgccagctt gtcgtgcaaa atctcggatc gcagtgagtc
     1381 ggtaaatccg cgaatggcga acttggcgcc gcaatacacg gattggagcg ggacggagcg
     1441 ataagccagt gccgacccca cattcacgat tgagccgcgg ttgcgcgtgg tcattctccg
     1501 caaggcggcc atcatcccgt gcacctgacc gaaataggtg acggcggtcg cgcgctggac
     1561 ttcggccgcg gtcagccggg aaaccggagc gaacacggtc gccatcgcga cgttgaccca
     1621 gataaccatc ggtccaagtt cgtcctcgat ccgggtcgcg gccgcctcta ccgcctcggc
     1681 gtccgcgacg tcggttggga tggcgagtgc gcgtacgccg aacgcgcgcg cctcctgggc
     1741 cgcgtcttcc aaacgcccgg gatcacgcga gagaagtgcc aggtcgcagc cagcgcgcgc
     1801 gaactccaca acggttgccc ggccaacgcc cgctccggca cccgtgatag caacgacctt
     1861 gcgcacaatt gcacctttcg gaatgtaatc gaatcaatga tctgtcccgg ggtccgttcc
     1921 gcgtcgccgg gcgacagaac gtgtaatcgg agacacgatc cgttggtggg tcaccgtgcc
     1981 ggctgcgtca ctgtgtccgg tcgcgtcgcc aggtcatggc gtgtgaagga atccagacct
     2041 ccgaggccca gcataacgaa aagccagaat acgccggcca atgcgaagat cgacggcagt
     2101 ccgcggttgc cgccgagccg catgaatgtc agtgccacga gtaccgccat ggcgatgccg
     2161 atgaacggtg c
//
LOCUS       DATAVD010000815         5635 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1565903, whole genome shotgun sequence.
ACCESSION   DATAVD010000815 DATAVD010000000
VERSION     DATAVD010000815.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5635
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1565903"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..673
                     /locus_tag="VHX39_15595"
     CDS             <1..673
                     /locus_tag="VHX39_15595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992592.1"
                     /translation="ATAIRVCYTDASVWDNFDPRTITLCSPDPQAFRPPEDKVNVLQV
                     RLPTNFKSARFVSDEDTAILRQMQDDIEKATYESGGERIELPVKLKVHDSVFVPLAKW
                     SMLLAGNYRCVQADGMRSIRDAVHSDLDATRAVYNWVFDLSVGLGASPHDLVPFDKYA
                     QAAQSLVTPSSAARALANGAPNIERVDKLIQVIAAGRGTRLEAIDNTVALVDGWVERN
                     RKKAA"
     gene            complement(934..4944)
                     /locus_tag="VHX39_15600"
     CDS             complement(934..4944)
                     /locus_tag="VHX39_15600"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HEX3992593.1"
                     /translation="MRRLLKYLAWIIGVLVAIPIVLIGSVLIGANTDPGRRMIETLIP
                     RVSGGMVQLEGLRGHFPDRLRIRRLTVADPGGVWLTVNDAALDWLPLHLLEAEVAVTR
                     LEAQSVVVDRLPAASSGGGGGGGVPPLHGVLSRLHIARLDIGPKVAGQPIALAVDGAG
                     QIVGPDNGEVHLAITALQPRENAPLDHYLVEASMVPSHLHATISVAEGAHGLIAGLAQ
                     LPDLGAIAIAGSVDGPLDALATQATVGAGLLRGNLSGNVNLAAHNADLAFSVVAPAMT
                     PGPGVAWSLVRLEGKVHGPFTAPEATASLAADGLTAAGATIGSVRAKVSGDATGKTEL
                     HATLDGLRVPGPAPAILANGPLTVDATVQLADANMPARFTVTHTLFSIDGSADTTQGK
                     MRLTVPDLTPFAAIGGVGLQGHTALDIGAVRSGDTIDLTLTGDIGITGGMAPVPALIG
                     DSGTIDLAASMHGEDVTLSRFVVKGANFGATANGQFLNGNLNADWTLALNDLAAIRPD
                     LAGTIAARGHASGTPASLSISSDLTGNLAANGQRLEQVTAHVTLDGLPGAPTGRLTAG
                     GTLFDAPLDVAISAERQDAGIHVVIDRTNWKSLTAAGTLDLPTGAVLPTGKLTLSMSR
                     LEDLAPLIGRPIAGNVSATVDSSPDVTRIHVLVGNGSVAAAAAVAKAGLDATITNVTD
                     HPVIDGALTLDGIVASGVRGSGRMTAKGPLDGLQLTLTASADSVDGMPARLDAAGAMN
                     ATEETLSLASLQGAWGRETIKLRAPAKIKFADGITIDRLTLGFRQGELTVAGKWGAGG
                     TALSVDLTNLPADMLAAVAPEYAADGTIAGEARLAGSPARPEGTIHIHAAGLRLRTGS
                     GRALPAAASTIDITLAGSNARVNANVIAGSSNVTVGGQLPLNTSGPMDVRIGGTVDLA
                     MLNPLLAAQGRDVRGRVGLNLEVVGSPEAPKPGGTVQLTNGDVQDSSLGAHITGIAAL
                     VRFDGETIHLERLEGKAGQGTISGSGTVAITGTQAVDVSLRASNAKLLASDLITAVAD
                     VNLSLRGTLQGDLTVAGTVLARTVNIQIPEKLPPGIAVLPVRNAGTPPPKPPPPTPMP
                     AITLNLTLDAPARIYVRGRGLDAELGGRVVFAGTAAAPVPQGGLNLRRGTFSLAGQTL
                     NLTEGKIDFAGAPISNPSLKLVATAGNATLTSTLTISGSVRDPKITLSSVPDMPQDEI
                     LSQLLFNTAKSRLNPFQIAQIAAALAELSGVGPSVGDPLGGVRSALGLDQLSVGSDAS
                     GGTALQAGRYIAPGVRIGASQSATGTGTQATVQVDITKGLKLETTVGTGGTSATPGVA
                     GSSNGTGVGLKYQFEY"
     gene            complement(4944..>5635)
                     /locus_tag="VHX39_15605"
     CDS             complement(4944..>5635)
                     /locus_tag="VHX39_15605"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEX3992594.1"
                     /translation="TRKLSDHWTAELGILAEQEYIVQEDVGRNFNFVGLPGSIKYDST
                     KSLLDPVEGIRAAFSVQPTQSLGGGGGTYFITQLSGSTYLNLTGDGRSVLAFRALVGQ
                     ISGASVFGLPPDQRFYAGGTGTVRGYRYQSVGPLFADGVPTGGTAVSAGTVEFRQRFL
                     ESWGVATFFDVGQASPDGKPFSSNMREGVGAGLRYYTPIGPIRVDFAIPMVPVRGGDS
                     FEVYIGIGQAF"
BASE COUNT         1073 a         1863 c         1684 g         1015 t
ORIGIN      
        1 cgccaccgcg atccgcgtct gctacaccga cgcctcggtt tgggacaatt tcgatcccag
       61 gacgattacc ctgtgcagcc cggacccgca ggcgttccgc cctcccgagg acaaggtgaa
      121 cgtgttgcag gtgcggcttc ccaccaactt caagtcggcg cgtttcgttt cggatgaaga
      181 caccgcgatc ttgcgccaga tgcaggatga tatcgaaaag gcaacatacg agtcaggcgg
      241 agagaggatc gaattgccgg ttaagctgaa agtgcatgac tccgtatttg ttccgttggc
      301 gaagtggtcc atgttgttgg ccggaaatta tcgttgcgtc caggcggatg gcatgcgctc
      361 gatcagagac gcggtgcaca gcgatctcga cgccacgcgc gccgtgtaca actgggtctt
      421 cgatctcagc gttggtttgg gcgccagtcc gcacgacctt gtgccgttcg ataaatacgc
      481 ccaggcggcg cagtcgctgg tgacgccgtc gtccgcggcg cgggctctgg ccaatggtgc
      541 gccgaacatc gagcgggtgg acaagcttat ccaggtgatc gccgccggca ggggaacgcg
      601 gttggaggcg atcgataaca ccgtggcact ggtcgacggt tgggttgaac ggaaccgcaa
      661 gaaggcggca tgaccgaacc tgcgcgagtc ccggcggccc gacggccgcc ggaattgcgt
      721 attcgttgcg accggacgtt aagccacgtg aacgattatc gggcgcggtt tggcggtccc
      781 ttccaaccga tgtacggacc ggatctgggt ggcctgcaac agatcttcgc atcagttacg
      841 ccgagcaatc tcagccggtt ctgatcggat cgagaccatt gtgcaaaatt gcccaacggc
      901 gcgcggtggc cacaccagcc gggcaaggca cgcctaatat tcgaactgat acttcagccc
      961 cactccagtc ccattcgagc tacccgccac tccaggcgta gccgacgtcc cgcctgtccc
     1021 cacggttgtt tccagcttca accccttggt gatgtcgacc tggaccgtgg cctgcgttcc
     1081 ggttcctgta gcgctctgcg aggcaccaat cctgacgccg ggcgcaatgt agcgtccagc
     1141 ctgcaacgcc gtaccgccgc ttgcgtcgct gcccaccgaa agctgatcaa gccctagcgc
     1201 cgaacgcacg ccgcccagtg gatcgcccac cgacggcccg acgcccgaaa gctcagccag
     1261 cgctgccgcg atttgcgcga tctgaaaagg attaaggcgc gatttcgccg tgttgaacag
     1321 caactgcgac aagatttcgt cctgcggcat atcgggcacg ctcgacaggg tgatcttcgg
     1381 atctcggacg gaaccactga tcgtcagagt gctggtcaga gtcgcattgc ccgccgttgc
     1441 gacaagcttc aaggacgggt ttgaaatcgg agcccccgca aaatcgatct tgccctcggt
     1501 caggttcagt gtctggccag ccaggctgaa ggtgccccgg cgcaaattca ggccaccctg
     1561 cggcaccgga gccgctgctg tacccgcgaa tacgacgcgt ccgccgagtt ccgcgtccaa
     1621 cccccggcca cggacataaa tccgcgccgg cgcatccagt gtgaggttca gcgtaatagc
     1681 cggcatcggc gttggcggcg gcggttttgg cggcggggtt cccgcgttgc gcaccggcaa
     1741 aactgcaatg cctggcggca gcttttcagg aatctggata ttcacggtac gggcgagcac
     1801 ggttcccgcc accgtcagat cgccctgcag agtgccacgc agactcaaat tgacgtccgc
     1861 caccgccgtt atcaaatcgc tcgccaggag ctttgcattg ctcgcccgca gggacacatc
     1921 caccgcctgc gtgccggtga ttgccaccgt gccggagccg gagatcgttc cttgtccggc
     1981 tttaccctcc aaccgctcca ggtggatcgt ttcaccgtca aaccggacca gcgcagcaat
     2041 cccggtgatg tgcgccccca ggctggaatc ctgaacatcg ccgttggtca actgcacggt
     2101 cccacctggc ttgggggcct caggcgaacc cacaacctcc agattcagcc caacccttcc
     2161 tcgcacatcc cttccctggg ctgccaacaa cggattgagc attgcgaggt ccaccgtccc
     2221 gccaatccgc acgtccatcg gacccgaggt attgagcggc aactgaccac ccacggtcac
     2281 gttggacgag ccggcaatca cgttggcatt aacccgggca ttcgacccgg ccaacgtaat
     2341 gtcgatcgtc gaagcggctg ccggtagagc ccttccactg ccggtgcgca aacgcagtcc
     2401 ggcagcatgg atatggatgg ttccctctgg gcgagcggga ctgcccgcca ggcgcgcctc
     2461 accggcgatc gtgccgtcgg cagcgtactc gggtgcaacg gcagccagca tgtccgctgg
     2521 caggttggtc aggtccacgc tcagtgcggt accacccgcg ccccacttgc cggcaactgt
     2581 cagctcgcct tgacgaaagc ccagggtgag gcggtcaata gtgatgccgt cggcgaattt
     2641 tattttggca ggcgcacgta gcttgattgt ctcgcggccc cacgcgcctt gcagcgatgc
     2701 cagcgacaga gtttcctccg tcgcattcat tgcgccggcc gcatcaagcc gagccggcat
     2761 gccgtccaca gaatcggcac tggcggtgag tgtcagttgc agcccgtcca gcggtccttt
     2821 ggcggtcata cgaccggatc cgcgcacgcc gctggcaaca atcccatcga gcgtgagcgc
     2881 gccatcgatg accggatggt cagtgacgtt cgtaatcgtt gcatcgaggc ctgccttggc
     2941 caccgccgct gctgccgcga ccgatccgtt gccaacaagc acatgaatcc gcgttacatc
     3001 aggcgatgag tcgacagtgg ccgagacatt ccccgcaatt ggccggccga tcagcggcgc
     3061 gaggtcctcc aaacggctca tgctcagagt gagtttgccg gtgggcaaca ctgcgccggt
     3121 cggcaggtcc agcgttccgg ctgcggtcag gcttttccag ttggtacggt cgattacgac
     3181 gtgaatgcca gcatcctgcc gttcggcgct gatggcgacg tccagcgggg cgtcgaacaa
     3241 agtgccgccg gcggtcaggc ggccggtcgg cgcgcctggc agaccgtcca gggtgacatg
     3301 ggcagtcacc tgctccagac gctggccgtt ggcggcgaga ttaccggtca ggtcgctgct
     3361 gatcgacagc gacgccgggg tcccagaagc atgtccgcgc gccgcgatcg ttcccgcaag
     3421 atccggccgg atcgccgcca ggtcgttcag tgccaaagtc cagtcggcat tcaaattgcc
     3481 attgaggaac tgcccatttg ccgtcgcacc gaagttggcc cctttcacca cgaaccggct
     3541 tagcgtgaca tcttcaccgt gcatcgacgc ggccaggtcg atcgtgcctg aatcgccgat
     3601 caatgcaggg acgggcgcca ttccgccggt gatcccgatg tcacccgtca gtgtcaggtc
     3661 aatggtatct ccggatcgta cggcgccgat atcgagcgca gtgtgcccct gcagaccgac
     3721 gccgccaatc gctgcgaacg gggtcaggtc cggcacggtc agccgcatct tgccctgcgt
     3781 ggtatccgcg ctgccgtcga tcgaaaacag cgtgtgcgtc acagtaaagc gggctggcat
     3841 gttggcgtcg gccaactgga ccgttgcatc cacggtcaac ggcccgttgg ccaaaatggc
     3901 cggcgccgga ccgggcacac gcaatccatc cagcgtggcg tgcagctctg tcttgccagt
     3961 agcatctccg ctgactttgg cgcgtacaga accgatcgtg gcaccagctg cggtcaggcc
     4021 atcagccgcc aggctcgcgg tcgcctcagg cgcggtgaaa ggtccgtgca ccttgccttc
     4081 caggcggacc aacgaccatg ccacccccgg cccaggtgtc atcgccggcg cgacaacgga
     4141 aaatgcgaga tctgcgttgt gggctgccag gtttacgttc ccgctgaggt tgccacgcaa
     4201 cagacccgcc ccaaccgttg cctgcgtagc gagcgcatcg agcggaccgt caaccgatcc
     4261 ggcaattgca atcgcaccga gatccggcaa ttgcgcgaga ccggcgatca acccatgcgc
     4321 gccctcggca acgctgatcg tggcgtgcaa atgcgacggc accatcgacg cttcgaccaa
     4381 ataatgatcg agcggcgcgt tctcacgcgg ctgcagagcg gtgatcgcca aatgcacctc
     4441 tccgttgtcc ggaccgacga tctggccggc tccgtctacc gccaacgcga tcggttgacc
     4501 ggcgaccttc gggccgatgt ccaatcgcgc aatgtgcagc cgggacaaca caccatggag
     4561 cggcggcact ccccctcccc ctccaccacc tgatgatgcg gccggcaacc ggtcaaccac
     4621 gacgctctga gcctccaggc gcgtaacggc gacctcagcc tcgagcagat gcaacggcaa
     4681 ccagtcgagt gcggcatcgt ttacggtcag ccagaccccg ccgggatctg caacggtcag
     4741 ccgccggatc cgcaacctgt cagggaaatg gcctctgagg ccctcgagct gcaccatacc
     4801 gccgctgacg cgtgggatca gcgtttcaat catacgccgg cctgggtcgg tattggcgcc
     4861 gatcaaaacc gaaccgatca gcacgatcgg gatcgcgacc agcaccccga tgatccacgc
     4921 caggtattta agcaggcggc gcatcagaat gcctggccaa tgccgatata gacctcgaat
     4981 gagtcgccgc cgcgcactgg caccatcggt atggcaaaat ccactctgat cggtccgatt
     5041 ggcgtgtagt agcgcaggcc cgctccgaca ccttctcgca tgttcgaact gaatggtttc
     5101 ccgtcggggc tggcctggcc aacatcgaaa aatgtggcca caccccaact ctccagaaac
     5161 cgctgacgga actcaacggt tcccgccgac accgcagttc ctcccgtggg tacgccgtcg
     5221 gcaaacagcg ggccaacgga ctggtaacga tagccgcgga ccgtgccggt gcctccggca
     5281 taaaagcgtt ggtcgggcgg cagaccgaac acgctggcgc cggaaatttg gcccaccagg
     5341 gcccgaaacg ccagaacact gcgtccgtca ccggtcaggt tcaggtaagt cgatccggac
     5401 agctgcgtaa tgaaataggt gcctccgccg ccgccaagcg actgcgtcgg ctggactgag
     5461 aaagcggcac gtatcccttc gaccggatcc agcaaacttt tcgtgctgtc atatttgatg
     5521 ctgcctggca gtccgacgaa attaaagttg cgaccgacat cctcctggac gatgtactcc
     5581 tgctccgcca aaattccgag ttctgcggtc cagtggtccg ataactttcg cgtaa
//
LOCUS       DATAVD010000816         1894 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1378574, whole genome shotgun sequence.
ACCESSION   DATAVD010000816 DATAVD010000000
VERSION     DATAVD010000816.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1894
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1378574"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(206..796)
                     /locus_tag="VHX39_15610"
     CDS             complement(206..796)
                     /locus_tag="VHX39_15610"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX3992595.1"
                     /translation="MRASLTFTALVVAGLVQVPWSNGWAADPPSASSLIQSLTPGSAG
                     TTRGIRLGQPPAPAPSGTPASTGAAARPASTRAAANQGEARLSVPFASGSAEISPVAA
                     RVLDELGKALTSPNLAAYKFRVEGHTDTVGAPDMNKALSEQRANSVTEYLVTKFGIDR
                     SRLTPVGMGEDGLLVATGPGVPNAANRQVRVVTLTQ"
     gene            complement(833..1819)
                     /gene="moaA"
                     /locus_tag="VHX39_15615"
     CDS             complement(833..1819)
                     /gene="moaA"
                     /locus_tag="VHX39_15615"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HEX3992596.1"
                     /translation="MIDPFGRPITYLRVSVTDRCDLRCVYCMAEDMTFLPKRELLTLE
                     ELDRLSSAFIRLGTTKIRITGGEPLVRRDIIRLFQSLGSRLGAGLNELTVTTNGTQLA
                     KHAVGLYAAGVRRINVSLDSLDPARFTHLTRWGKIEQTLDGIFAAKAAGLAIKINAVA
                     MKGVNEDEFDTMLAWCGEHGFDLCLIETMPMGEISEDRTAQYLPLSIVRSRLRKTWTL
                     DDTDYRTGGPARYFNVKETGRRIGFITPMTHNFCESCNRVRLTCTGTLYMCLGQDDAA
                     EFRPLLRAGASDDELDDAIRAAIARKPKGHDFIIDRRHDKASVSRHMSVTGG"
BASE COUNT          351 a          605 c          572 g          366 t
ORIGIN      
        1 tgcgcgcaat gcgacgtttc gaaaaaacac aacaaacgat cgtggaagct gttacataat
       61 ggagagcgga ctgccggtgc ttccagccac tacgcgcaga tgccaaaaaa actcagtgat
      121 cgaaacgctc gatatcttcc agcaccagac caggccggca ctgtatgagg tgatcgccca
      181 ttcctgtcgc gtcgcatccg aatagttact gcgtcagcgt aaccacccgc acctgccggt
      241 tggcagcgtt tggcacgcct ggcccggtcg cgaccagcag cccgtcttcg cccatcccga
      301 ccggtgtcag ccgggagcgg tcgataccga acttcgtcac cagatattcg gtcacactgt
      361 tggcgcgctg ttccgagagc gccttgttca tgtccggcgc cccgaccgtg tcggtatggc
      421 cctcaacgcg gaacttgtaa gccgccaggt ttggactggt cagcgctttg cccagttcat
      481 ccaacacgcg agccgctacc ggcgagatct cagcggagcc cgaggcaaac ggcaccgaca
      541 gccttgcctc gccctggttc gctgccgccc gtgtcgaagc tggcctcgcc gctgcgccgg
      601 tgctggctgg tgtgcccgat ggagcgggtg ctggcggctg ccccaaacga ataccgcgcg
      661 tcgtgcctgc gctgcccggg gtcagcgact ggataagcga cgaggcgctc ggaggatcgg
      721 cagcccaccc gttcgaccag ggcacctgga ccaatcccgc aacgaccaag gcggtgaaag
      781 tcagagaggc tcgcatgtcc gatcgctcct tcccgttgcg gtggaaacgg ggttagccgc
      841 cggtcacact catgtgccgg ctgaccgagg ctttgtcatg ccgtcggtcg atgatgaaat
      901 cgtggccttt gggcttgcgg gcaatcgccg cgcggatcgc gtcgtccagt tcgtcgtccg
      961 atgccccggc ccgcaacagt ggccggaatt cggctgcatc atcctgaccc aggcacatgt
     1021 acaacgtgcc agtgcaggtc agccgcaccc gattgcagct ctcgcagaaa ttatgggtca
     1081 tcggggtgat gaacccgatc cgccttccgg tttccttgac attgaaatag cgcgctgggc
     1141 cgccggtgcg ataatcggtg tcgtcgagcg tccaggtctt gcgcagtcgg ctgcgcacga
     1201 tcgacagcgg caggtactgg gccgtgcggt cttcgctgat ttcgcccatc ggcatggtct
     1261 cgatcagaca caggtcgaac ccgtgttcgc cgcaccaggc gagcatggtg tcgaattcgt
     1321 cctcgtttac gcccttcatc gccacagcgt tgattttgat tgcaagaccg gccgccttgg
     1381 ccgcgaaaat cccgtccagc gtctgctcga tcttgcccca gcgtgtcagg tgggtgaacc
     1441 gggcaggatc aagcgagtcc aacgatacgt tgatccgccg cacacctgcc gcatacagcc
     1501 ccaccgcgtg ctttgcgagc tgggtgccgt tcgttgtcac tgtcagctca ttcagtccgg
     1561 cacccaggcg cgagcccaga gactggaaca ggcggataat gtcgcgccgg accaggggct
     1621 cgccgccggt gatgcgtatt tttgtcgtgc ccagacggat gaaggcgctg gacagccggt
     1681 cgagttcctc gagagtcaac agttcccgct tcggcaggaa cgtcatgtcc tcggccatgc
     1741 aatacacgca gcgcaggtcg cagcggtcag tcactgaaac ccgcaggtat gtgatggggc
     1801 ggccgaacgg gtcgatcata atggcgttaa tactccttct catatcgctc aggcaatccc
     1861 atcaggcgat acacgggatg ccgaagcgtc actc
//
LOCUS       DATAVD010000817         4301 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2498577, whole genome shotgun sequence.
ACCESSION   DATAVD010000817 DATAVD010000000
VERSION     DATAVD010000817.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4301
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2498577"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..833)
                     /locus_tag="VHX39_15620"
     CDS             complement(<1..833)
                     /locus_tag="VHX39_15620"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX3992597.1"
                     /translation="MIFDIIIVGGGSAGTVLANRLSARSQNKVLLLEAGQDTPHGKVP
                     EEVLDSYPGTASRNPNYLWDKLKVSTQAISHNDPPVRPPPLHPYEQARILGGGSSING
                     QLANRGAPTDYDEWASRGATGWDWNSVLPYFRKIERDMDFDGPWHGSEGRIPIRRIFP
                     DLWPEHAKAVGKAFEAAGYRFLRDQNAEWEDGYFPVAISNAYERRVSAAIGYLDPATR
                     MRENLTISTDTQVSELIFDGQRCVGVKAVVAGQQQEFRGNEIILSCGAIHSPAHLMRA
                     G"
     gene            complement(1307..2050)
                     /locus_tag="VHX39_15625"
     CDS             complement(1307..2050)
                     /locus_tag="VHX39_15625"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3992598.1"
                     /translation="MSQIQYETDGAVVIGGVGEGLGLALSHRFARAGHSVVMLARTQE
                     KLDRFADQIRADGGKAEGLTADIRDEKQMIAVFENVVARHGILTAAIFNGGANHRKPI
                     LDITGDVFEKVWRLACFGAFVFGTEAARHMVPQGRGTILFTGATASLRGGAQFAAFAA
                     AKFGARAIAQSMARELGPKGIHVASVVIDGGIDMPAIHRRYEALGKTAPPDGLLSAAA
                     IAETYYQIHAQQRSAWTMETEVRQYCETF"
     gene            complement(2047..2697)
                     /locus_tag="VHX39_15630"
     CDS             complement(2047..2697)
                     /locus_tag="VHX39_15630"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX3992599.1"
                     /translation="MTAKLILWGATTSRTMRAHWALAELGLSYEGRPIEPRSGETKTD
                     EFTALTARQKIPLLQDGDLILTESAAIIAYLSDQYGNNENRLVPLEPRERAICLEWNF
                     FVISELDAASLYVIRRHEGLKHIYGHAPVANEAAAQYFVAQMRSVDRALGDGRPFIAG
                     PRFGAADILLSTCLSWAVLYGVPVSDAANEYNVRLKTRPAYARAVELNRAPTDRIP"
     gene            complement(2694..3893)
                     /locus_tag="VHX39_15635"
                     /pseudo
     CDS             complement(2694..3893)
                     /locus_tag="VHX39_15635"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
BASE COUNT          822 a         1345 c         1282 g          852 t
ORIGIN      
        1 atcccggcgc gcatcagatg ggccggagag tggatggcac cgcaggacag gatgatctca
       61 ttgccacgga attcttgttg ctgaccggca acgacggcct taacaccgac gcaacgttga
      121 ccatcaaaga tcagctccga cacctgagtg tctgttgaga tggtcaaatt ctcccgcatc
      181 cgggtggccg ggtccaggta gccgatcgcg gctgatacgc gtcgctcata agcgttggag
      241 atggcgaccg ggaaatagcc gtcctcccac tccgcgttct gatcccggag gaagcggtaa
      301 ccggccgcct cgaacgcttt tcccaccgct ttcgcgtgtt ccggccagag gtcggggaag
      361 atgcgccgga tcggaatgcg accttcgctg ccatgccatg gaccatcgaa gtccatgtca
      421 cgctcgattt tcctgaagta gggcagcacg ctgttccagt cccagccagt cgcacccctt
      481 gacgcccact cgtcataatc ggtcggtgcg ccgcggttgg ccaattggcc attgatcgag
      541 gaaccgccac ccaggatgcg cgcctgttcg tagggatgca gcggcggcgg cctgaccggc
      601 ggatcgttgt gcgagatcgc ctgggtggag accttgagct tgtcccaaag atagtttgga
      661 ttccgggacg ccgtgcccgg gtaggagtcc agcacctcct cgggcacctt tccatgtggc
      721 gtgtcctgac cggcttccaa cagcagaact ttattctgac tccgtgccga gagccgattg
      781 gccagtacgg tcccggccga gcccccgccg acgatgatga tatcaaagat cacggccggc
      841 tggcctcgca aggaaccaca ttgacacggt cccgtcctgg gctcgctgca tccgaaatca
      901 tgcttcctct ttcgtggtcg ggaaaaggat cgccttgttt ggcggccgct gacaagaggc
      961 agcacctgat caatcgtggt aacgagtggc cgggacaggt cacgcggttg cagctcggtt
     1021 tgatcgccag cgtgtgaaca taacaaactc cagaagcgcg gccagtatca cagacaccgc
     1081 ccatgaacga ctccgcatca gaaagccttc gaagatctcg gcatcgttga cttcgcggcg
     1141 ctgaatatcc ctgctgctca attgttgaaa tgggttctcc cattgtctcg atcagccgga
     1201 accggacgtc gcgccagatc gatcgccatg gccaggccgg cggagaacag gtgccgatta
     1261 agacaccggt cgcgaattcc tctgtcaaga ccgtctctgt aacccgtcaa aatgtttcgc
     1321 agtactgacg aacttcggtt tccatcgtcc aggcactgcg ctgctgcgcg tgaatttgat
     1381 agtatgtctc agcgatcgct gcagcactga gtagcccgtc ggggggggca gtcttgccca
     1441 gagcctcgta gcggcgatga atcgcgggca tgtcgatacc gccgtcgatg acgacagagg
     1501 cgacgtggat tcctttcggc ccgagctcac gagccatgct ttgcgcgatg gcccgtgcgc
     1561 cgaatttcgc cgcggcgaag gctgcgaact gcgcgccgcc gcgcaacgag gcggtggcgc
     1621 ccgtgaacag aatcgttccg cggccttgtg gaaccatatg ccgcgccgcc tctgttccga
     1681 atacgaaggc gccaaagcag gcaaggcgcc agactttctc gaacacatcg ccggttatat
     1741 ccaggattgg tttgcgatgg ttggcgccac cgttgaagat ggcggcggtc agaataccgt
     1801 gacgcgccac cacgttctcg aatacggcga tcatttgttt ttcatctctg atatccgccg
     1861 tcagtccctc ggccttgccg ccgtccgcac gaatttggtc cgcgaaccgg tcgagctttt
     1921 cctgtgtccg ggccagcatc acgacagaat gacccgcgcg cgcgaaccgg tgcgacaagg
     1981 cgagtcccag cccttcgcca acaccgccaa tcacgacggc gccgtctgtt tcgtattgga
     2041 tttggctcat ggaatgcgat ccgttggcgc tcggttcagt tcgacggctc tcgcgtaggc
     2101 aggccgtgtc ttcaagcgga cgttgtactc gttcgcggca tccgacaccg gcacgccata
     2161 caggacagcc caggacaggc aggtggacag cagaatgtcg gctgcaccga agcgcggacc
     2221 ggcgatgaag gggcggccat cgccaagcgc acggtcgacg cttcgcattt gagcaacgaa
     2281 atactgtgcc gcagcctcat tcgcgaccgg agcgtgaccg tagatgtgct tcagcccctc
     2341 atggcggcga atcacataaa gcgatgctgc atccagctcg ctgatcacaa agaaattcca
     2401 ctccaggcaa atcgctcgtt cgcgtggctc aagcggaacc aggcgatttt cattgttgcc
     2461 gtattggtcc gacaagtatg cgatgatggc cgcgctctca gtcaggatca gatcgccatc
     2521 ctgcaacagc ggtattttct ggcgcgccgt cagcgcggtg aactcatccg ttttcgtctc
     2581 gccgctgcga ggctcgatcg ggcggccttc gtaggaaagc ccaagttctg ccagtgccca
     2641 atgcgcgcgc atggtgcggg acgtcgtcgc accccacagg atcagttttg ctgtcatggc
     2701 aatgagttcc aggccgaagc ggcaccactg gcaatcatct cggcaatctc cgatcgcgcg
     2761 aggccgatct ccgcaaggat ttgctccgta tgctcaccaa gtcgaggtgc cggtccgtgg
     2821 atgccggcgg gcgtgttctc gaaccgggcc gcgggacgcg cctggtggat tgttccaagg
     2881 cccggctgtt cgattgtttc gattaaacga ttatggacaa cctgtgggtc gttcagcacc
     2941 tgctctcgcc gcaggaccgg cgcactgggt acgtcgttgg ctgccaacag tttcagccac
     3001 tcctcggttc ggcgcgactg cagaaccgcg ccaatgactg cgattcgctc cgcggcattc
     3061 accgatcgcg ccgattggga acgaaaccgc ggatcgtcga cccattccgg tctgcccagg
     3121 gcggcgcaca ggccgcgcca ttccgcatcc gatacggtcc cgacggtaat atatccatcg
     3181 gccgtacgat aaatcagatc gggccgcggc ggaccggacg gctttgggcg tcctggaatc
     3241 gcgtaatctg ccatcgcttc gggccacagg aaggtgacca tggcgtccag catagcaaga
     3301 cgaatatgct gtccctcacc ggtcttttcg cgcgcgaaca atgcggcgca gatcgcctgc
     3361 gcggcgaatg cgccagtggt cttgtcggcg ataatggtgc gaaccatccg tggccggccc
     3421 gtttcgtcag tttgaacatc cgcaaggccg gacaacgact gaatcacagg atcttaaacc
     3481 cgttgcgcag catacggccc ggtttcgccc acgccgctga tcgacgcata gatcagccgc
     3541 gggttaatgg cgtgcaacgc ctcaaagccc agacccaaac ggtccatcgc gccgggccgg
     3601 aagttttgca ccaggacatc agagacggcg gccaaacggc gcaccacgcc ttgtgcttcg
     3661 gctcgcttca gatcgagggc gagcgagcgt ttgccgcgat tgcaggcgac gaacattgca
     3721 gtgacctgac cgtccgccga agaacgtcgc atgatgtcgc cgtcacgggg ttcgattttc
     3781 acaacatcgg cgccctggtc ggcgagtaac gcggcgcaaa ccggtcccga cacgaccgag
     3841 gtcaggtcga tgacccgaac ccctgacaat ggccctggcg acagtttcgt catggcgtct
     3901 cctgctgctt ggatgttgcc gccagcttcg cttacgaggt gacagcccgg caagccgctc
     3961 gctattcata ggcgacacgg cgagcctcaa tgcgaccgcc atccttcgct gcccggcacg
     4021 gtgtcgacgg cagggactgt tgtgctctcg ttgtccataa ctctcgtcat agtagttact
     4081 gcgggtcaac gagtcgccat cctttcgatc gcccaccggc aaccgcgctc tgtcgccagt
     4141 taggaagaat ccctcgcgcc aaacggcgac tgtgtgcttt cagcgctact tcgccattgg
     4201 cgcgcgtgtc ggtggaagcc cgagcagcat tctatccggg ccgggcggtg ccccgatggt
     4261 aggaacaacc tcacgactgg tttcacgttg cgcgcggatg c
//
LOCUS       DATAVD010000818         2762 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_448939, whole genome shotgun sequence.
ACCESSION   DATAVD010000818 DATAVD010000000
VERSION     DATAVD010000818.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2762
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_448939"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..257)
                     /locus_tag="VHX39_15640"
     CDS             complement(<1..257)
                     /locus_tag="VHX39_15640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992600.1"
                     /translation="MAPKGDANQDLVGRPADGASAEPVRRPGRRFGWRSDLSLRSRLI
                     LLVMACIVPLGVTGLARRYLDYREGRAAVYDGLLTTAHGTA"
     gene            425..2479
                     /gene="tkt"
                     /locus_tag="VHX39_15645"
     CDS             425..2479
                     /gene="tkt"
                     /locus_tag="VHX39_15645"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX3992601.1"
                     /translation="MTNRSSTTEPAPKTVPAPRDPHLREMANCIRFLAMDAVQRAKSG
                     HPGAPMGMADIATVLFTEFLRFDAADPHWIDRDRFILSNGHGSMLLYSLLYLTGYQDM
                     TLEELKNFRQAGSKTPGHPEYRHADGIELTTGPLGQGVAESVGMALGERILNATFGDE
                     LVNHFTYDFMGDGCLMEGISHEAISLAGHLRLGRLIAFWDNNSISIDGATNLAVSDNQ
                     VERFRASGWHVLEIDGHDTDAIRQAIVTAQSVTDQPTMIACRTIIGFGFPTKAGTQKA
                     HSDAPGEDEIAGARKILDWNSPPFVIPDPLLQAWRETGAKGRQARTDWADRVKQAPTR
                     LRKEFERRNDGKLPDDWRNAIAAARRDFIDSGKGMATRQASGAVLNHLFDAVPELLGG
                     SADLTPSNNTKAKNQVEIKPGDYTGSYIHYGVREHGMAAAMNGIALHGGLIPYGGTFL
                     CFSDYCRPAIRLASMMQIRTIFVMTHDSIGLGEDGPTHQPVEHLAALRAIPHLAVYRP
                     GDPIETAECWESIMDAPRRAALLALSRQPMPLLRRETGSKNKSAKGAYVLLEAEGGAR
                     KLTLMATGSELHLAVEARDALQKDGIPTAVVSMPCRLLFEEQDAAYRRSVMGDTNARV
                     AVEAAVELGWERYLGFHGRFVGMHGFGESGKIADVYRKFGITTEAVVQAAHAVINALT
                     GM"
BASE COUNT          546 a          894 c          867 g          455 t
ORIGIN      
        1 atggcggtgc catgtgcggt ggtcagcagc ccgtcgtaaa ccgcggcccg cccttcgcgg
       61 taatccagat agcgccgtgc caaaccggtg acgcccagcg gcacgatgca ggccatgacc
      121 aacaggatca ggcgcgaccg cagcgacaga tcgctgcgcc agccgaatcg ccggcccggc
      181 cgccgaacag gttcggctga ggcgccgtcg gccggccggc caaccaagtc ctggttcgcg
      241 tcccccttgg gcgccacgct gttccaacct cccgccttcg atcgggccta ttcaatcaca
      301 acggagcgag cgctggcgac atcttccgaa cgtgatactg ccgcgaagcc acgcaaacgt
      361 atcagaagtg cttctgggaa gacccgacgc gcgcaggcgc aacagcagcc agaaggacgg
      421 cggcatgacc aatcgttcat cgacaaccga acccgcgccg aaaacagtcc ctgccccgcg
      481 cgacccgcat cttcgcgaga tggccaactg catccgcttc ctggccatgg atgccgtgca
      541 gcgcgcgaaa agcggacatc ctggtgcgcc aatgggcatg gcagatatcg ccacggtcct
      601 gttcaccgag ttcctgcgct tcgacgccgc cgatccgcac tggatcgacc gggaccggtt
      661 catcctgtcg aacggccacg ggtcgatgct gctctacagc ctgctgtatt tgaccggcta
      721 ccaggacatg acactggaag aactgaaaaa cttccgccaa gccggcagca agacacccgg
      781 ccatcccgaa taccggcacg ccgacggcat cgaactcacc accggcccgc tcggccaagg
      841 cgtagccgag tcggtcggca tggcgttggg cgagcgcatc ctgaacgcga cgttcggcga
      901 cgagctggtt aatcatttca cctacgactt catgggcgac ggctgcctga tggaaggcat
      961 cagccacgaa gcgatctcgc tcgccggcca tctccggctc gggcggctga tcgccttctg
     1021 ggacaacaat tccatctcca tcgacggcgc gaccaacctt gcggtgtcgg ataaccaggt
     1081 cgaacggttt cgtgcctccg gctggcatgt gctggagatc gacggtcacg acaccgatgc
     1141 gatccggcag gccatcgtca ccgcgcagtc ggtgaccgac cagccaacca tgatcgcctg
     1201 ccggacaatc atcggatttg gctttccaac caaggcgggc acacagaaag cccatagcga
     1261 tgcgcctgga gaggatgaga tcgcgggtgc ccgcaagatc ctggactgga actcgccccc
     1321 attcgtgatt cccgacccgc ttctgcaagc ttggcgcgag acgggcgcca aaggcaggca
     1381 ggcacgaacc gattgggccg atcgggtgaa gcaggcgcct acccggttgc gcaaggaatt
     1441 cgaacgccgc aacgacggaa agctgccgga cgactggcgg aacgcgatcg ccgccgcgcg
     1501 ccgagacttc atcgacagcg gcaagggtat ggcaacgcgt caggcaagcg gtgccgtgct
     1561 caaccacctg tttgacgctg ttccggagtt gctgggcggt tccgccgacc tgactccatc
     1621 gaacaacacc aaggcgaaaa accaggtcga gatcaaacca ggcgactaca ctggctccta
     1681 catccactat ggtgtgcggg agcatgggat ggcggcggcg atgaacggca tcgccctgca
     1741 tggcggactg atcccctacg gcggcacgtt cctatgcttt tcggattact gccgcccagc
     1801 catccgtctt gcctcgatga tgcagatccg caccatattt gtgatgacgc acgattccat
     1861 cggcctcggc gaagatggac cgacccatca gccggtcgag cacttggcgg cactacgcgc
     1921 gattccgcat ctcgcggtgt accgccccgg tgacccgata gagacggccg aatgctggga
     1981 gtccatcatg gacgctcctc gccgggccgc gcttctggcg ctgtcgcgcc agcccatgcc
     2041 gcttttgcgg cgggaaaccg gttcgaagaa caaatccgcc aaaggcgcct atgtcctgct
     2101 ggaggcggaa ggcggcgctc gcaagctgac cttgatggcg acggggtcgg aactgcacct
     2161 cgccgtcgag gcacgcgacg cgctgcagaa agacggtatt cccacggcgg tcgtctcgat
     2221 gccatgccgt ctgctgttcg aggaacagga cgccgcctac aggcgcagcg tcatgggcga
     2281 tacgaacgcg cgtgtggcgg tggaagctgc ggtcgagctc gggtgggaac gttatctggg
     2341 gttccatggc cgcttcgtcg ggatgcacgg tttcggcgaa tccggaaaga tcgccgatgt
     2401 gtatcggaaa ttcggcatca cgaccgaggc agtggtgcag gccgcgcacg ccgtcatcaa
     2461 tgctttgacg gggatgtaat gccaaccgca gggcaatcgc ttgaacaaag gggggattcc
     2521 ggcgcggcct aaaatgcgat tcttgggagg cgccagcaat tgaatcgaat ggtgcctacc
     2581 agcgcgtcgt gcgtcgcatg ccatttaccg caagcacggg gcaggcccag gcaatccgag
     2641 cggttcggag cgatctcgca gcggggcggc cgatgaaccg cctcgtctgt ggcgacgtcg
     2701 gcttcggcaa gacagaagtc gccttgcacg cggctgctct ggtggctctg tccgggcgcc
     2761 ag
//
LOCUS       DATAVD010000819         1711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_79218, whole genome shotgun sequence.
ACCESSION   DATAVD010000819 DATAVD010000000
VERSION     DATAVD010000819.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79218"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..257)
                     /locus_tag="VHX39_15650"
     CDS             complement(<1..257)
                     /locus_tag="VHX39_15650"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX3992602.1"
                     /translation="MKVGVIGLGSMGMGAALNLHRKGHAVTGCEVRETARAEFEAAQG
                     RTVSSADQLPADLDAVVVFVINAAQADDVLFGSAGCLSRLN"
     gene            complement(271..1221)
                     /gene="pip"
                     /locus_tag="VHX39_15655"
     CDS             complement(271..1221)
                     /gene="pip"
                     /locus_tag="VHX39_15655"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HEX3992603.1"
                     /translation="MPRGDLFPEIGPYETGYLPLSTSHVMYWEQAGNPRGFPVLFLHG
                     GPGAGAGAVHRRFFDPTYWRIVIFDQRGAGRSRPLGGLEDNTTPFLVEDIERLRVHLG
                     VDRFLLFGGSWGSTLALAYAQTHPRRVAACVLRGIFLGRASEVNWFLHGIAMVFPDVH
                     AQFVAHLPEHERHDVLGSFLRRLVDPDPAVHMPAARAWSIFEGTCSTLLPSPDTITTF
                     AQDRTALGLARIEAYYFANNLFLPPGGLLAHMDKLRGIPAEIVQGRYDMICPATTAFE
                     LANAWQGARLTVVPDAGHSALEPGIRRALVSAVERFRALR"
     gene            complement(1288..>1711)
                     /locus_tag="VHX39_15660"
     CDS             complement(1288..>1711)
                     /locus_tag="VHX39_15660"
                     /inference="COORDINATES: protein motif:HMM:NF012273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX3992604.1"
                     /translation="ESMAINLYLAKKHNSPLYPSDPRNEALAWQWSFWEVDRLDRTLA
                     NYLTHTSILPAEQRDKSVADAAWAEVEPAMNVLNGALGKSKWLAGPEFSVADLNVACA
                     LWRCLGMDLSRWPAMRDWFTRCWDRPAGKKARAAREAT"
BASE COUNT          320 a          554 c          555 g          282 t
ORIGIN      
        1 ttgttcaacc gggacagaca gccggccgac ccaaacagca cgtcgtcagc ctgcgcggca
       61 ttgatcacga acaccacaac tgcgtcgaga tcggcgggca attgatccgc cgaactgacc
      121 gtccggcctt gtgcagcctc gaactcggcg cgggcggttt cccggacctc gcagccggtc
      181 accgcatggc ctttgcgatg caggttcaac gccgccccca tccccatgga gccgaggccg
      241 atcacgccga ctttcattgc gattgtctcc ttatcgaagc gcgcggaacc gctccacggc
      301 cgacaccaag gcgcgtcgga tgcccggttc caatgcggaa tgaccggcat ccggcaccac
      361 tgtcagtcgc gcgccctgcc acgcattggc gagctcgaac gccgtcgtcg ccggacagat
      421 catatcgtag cggccttgca cgatctcggc cggaatgccg cgcagcttgt ccatgtgcgc
      481 cagcaggccg ccgggcggca ggaacaggtt gttggcgaag taataagcct caattcgcgc
      541 cagtcccaaa gccgtccggt cctgtgcgaa cgttgtgatc gtgtccggac tgggcagcag
      601 cgtgctgcac gtgccctcga agatcgacca ggcgcgagcc gccggcatgt gcaccgccgg
      661 gtcgggatcg accagccgcc gcaggaagga gcccagtaca tcgtggcgct catgctccgg
      721 caaatgcgcc acaaactggg cgtgaacgtc cgggaacacc attgcgatgc cgtgcaggaa
      781 ccagttcacc tcggaggcac gaccaaggaa aataccgcgc aatacgcacg ccgcgactcg
      841 ccgggggtgc gtctgcgcat aggccagggc caatgtcgaa ccccaggagc cgccgaacaa
      901 cagaaaccgg tcgacgccga gatggacacg caaccgctcg atatcctcga ccaggaacgg
      961 cgtggtgttg tcttcgagcc cgcccagggg ccgcgaccgg ccggcgccgc gctggtcgaa
     1021 gataacgatg cgccaatacg tcggatcgaa gaaccgccga tgcactgcac cggcacccgc
     1081 gcctggtccg ccgtgcagga acagcaccgg gaaaccgcgc ggattgcccg cttgctccca
     1141 gtacatcacg tgggaggtcg agagcggcag gtagccggtc tcgtagggtc cgatctcggg
     1201 gaacaggtcg cctctgggca ttgccgggga tcgtagatgg gagggcgagc gggtggaaca
     1261 gattttctcc gctcgcgcag gttgaattca ggtcgcttcc ctcgctgcgc gggccttttt
     1321 gccggctgga cggtcccagc accgcgtgaa ccagtcccgc atcgccggcc agcggctcag
     1381 gtccatgcca aggcaacgcc acaacgcgca ggcgacgttg agatcggcaa ccgagaattc
     1441 cgggccggcc agccatttgg atttgccgag tgcaccgttg agcacgttca tggccggttc
     1501 gacctcagcc caggcggcat cggcgacgga tttgtcgcgt tgttctgcgg ggaggatgct
     1561 ggtgtgagtg aggtagttgg caagtgtgcg atccagccgg tcgacttccc agaagctcca
     1621 ctgccaggcg agcgcttcgt tgcgcggatc cgacggatag agcgggctgt tgtgcttttt
     1681 ggcgaggtag aggttgatcg ccatcgactc g
//
LOCUS       DATAVD010000820         5411 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1938978, whole genome shotgun sequence.
ACCESSION   DATAVD010000820 DATAVD010000000
VERSION     DATAVD010000820.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5411
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1938978"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..567
                     /locus_tag="VHX39_15665"
     CDS             <1..567
                     /locus_tag="VHX39_15665"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HEX3992605.1"
                     /translation="IGHGHAAQLLREIQNMSVRGDYMGMALSIDDLDGENIGYFKHCA
                     EHNFHLQKCDECSLLRYPPTTACPFCSCGTSTWAPVEGKGAVYSYLEVHHAIQPAFKA
                     KTPYLVLLVELDTQKGKPTEDDGLRVIANLTLPNGQFAPPEVVKSVGIGTRVRMAFSD
                     VADGLALPQWTIDETATQPAKPWRYPQE"
     gene            643..1536
                     /locus_tag="VHX39_15670"
     CDS             643..1536
                     /locus_tag="VHX39_15670"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX3992606.1"
                     /translation="MKQEDVLRHPPSVLTPAQRDSYFENGYLAAEGLIPDAWLRRLRE
                     LSAEFLDASKLIDSSNEAFDLGPQHRPDQPHVRRLRALVDRHPDFWRFASESVLADIA
                     ADLVGPDVKFHSAKLNYKWPGPGEIVDWHQDIPAWPHTNYSPLTLGVYLDDVPAEQGP
                     LTCIPGSQQGPIFVHRNDTGNWTGSIRQRDMLTVDRSRAEDLTGTAGTVIAINCRTIH
                     ASRANMTERVRPVALFVYSSADAFPWTAAPTPTSHTGDIVRGQPAQTAQLDATPCPVP
                     PDWSKIGYGSIFSVQRSGEAS"
     gene            1536..2390
                     /locus_tag="VHX39_15675"
     CDS             1536..2390
                     /locus_tag="VHX39_15675"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HEX3992607.1"
                     /translation="MALRSFLFAPGNHARRVEKALTLPADAVILDLEDAVAISEKPAT
                     RELVVAVFGQPRHGRLYVRVNAYTTEWCHGDIVAIARAGLDGIILPKVETANQLQSID
                     WLLANLERERGLPIGGIDLVPIIETASGMSNIGAIAGSGSRTKRLAFGAGDYTLDLGM
                     VWSRDEAELLPARSAVVMASRAAGIEPPLDTVWADLRDAEGFARSAESAAALGFQGKM
                     CIHPDQIAVTNTAFSPSPQQFNWALRVVAAFEEAEANGLASIQLDGQFIDYPIVQRAR
                     QVVARGAA"
     gene            2390..3586
                     /locus_tag="VHX39_15680"
     CDS             2390..3586
                     /locus_tag="VHX39_15680"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3992608.1"
                     /translation="MFDIQALQGCRVLDVASFLAGPFAATQLAEFGAEVIKVELPGVG
                     DATRRFGTMTECGDTLPWLSESRNKKCITLDLRKPDGVALIKRLVEQSDVLIENFQPG
                     TMERWGLGWDVLHAVNPRLIMVRISGYGQTGPYRDRPGFGRIGNAFGGLSFLAGYPDR
                     APVTPGSATIPDYMAGLYGAFGTLLALQARQKTNEGQMIDIGLYEPIFRILDELAPAF
                     QYKGYVRQRMGPGTVNVVPHSHYPTKDQRWIAIACTNDKIFARLAEAMQRPDLAERWS
                     TLAARERDRPIVDETVGAWTAQFDRADLLRMCEASQVPCGPVYSIDEIFQDPHYAARE
                     NILRVDDPRVGQLAIPNLVPKLSATPGHVNWLGPELGAHNDEIYRGLLGMDEAELQRL
                     KDAAVI"
     gene            complement(3759..4586)
                     /locus_tag="VHX39_15685"
     CDS             complement(3759..4586)
                     /locus_tag="VHX39_15685"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03619 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEX3992609.1"
                     /translation="MMQLGIHLPHIGRKASPENIRRAAMQAEQLGFADVWVSEHIIVP
                     KDGGYPPSPNFWDPVLTLTWAAACTARVRLGTSVLVLPMRHPLPLAKELATLQNLSKG
                     RLILGAGVGWLEAEFDALGVPFRERGRRMDEGIAMMKAVWSQDPVSFTARYIPAVIDN
                     MRTQPQPVKPIPIWIGGSSDAAINRALRLDGWHGSRVRPDSAADVVKRFRAVRPGDDF
                     TISLRININENNVGDSRAALAAYKAAGIQHVMAAPEDREIDPYLKTVERFVKAGEGL"
     gene            complement(4599..>5411)
                     /locus_tag="VHX39_15690"
     CDS             complement(4599..>5411)
                     /locus_tag="VHX39_15690"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HEX3992610.1"
                     /translation="GPGEHLRDKGIEVVHELPGVGSNLQDHFNTFCTYRLSRNLSLNS
                     LQYSFKDRMIAGARYVFLRDGPMTGNGLYVGALVRTDPRFERPDLQMNISCWSTIGRD
                     RNGIISHPHPGISISPVHLRPEARGTVRLGSSDPFAPPRIHFDFMKSDYDMQVMLYGI
                     RLARQIVRQQAMQKLVVEETSPGVNVRTDDEMIADTRERGISNLHPVGTCGMGRGPMA
                     VVDPRLRVHGLGGLRVVDASVMPVIIAGNTNAPTIMIGEKASDMILQDATAT"
BASE COUNT         1046 a         1658 c         1632 g         1075 t
ORIGIN      
        1 atcggccatg gtcatgcggc gcagcttcta agggagatcc agaacatgtc cgtcaggggc
       61 gattacatgg gaatggcgct gtcgatcgac gatctcgacg gtgagaatat cggctatttc
      121 aaacattgcg ccgagcacaa ctttcatttg cagaaatgcg atgagtgttc gctgttgcgt
      181 tacccgccca cgactgcctg tccattctgt tcctgcggca cttcgacctg ggcgccggtg
      241 gaagggaagg gtgcagtcta ttcctacctc gaagtgcacc acgccattca gccggcgttc
      301 aaagccaaga cgccgtattt ggttttgctg gtggaactgg acacccaaaa gggcaagccg
      361 acagaggatg acggattgcg cgtcattgcc aatctgacgt tgcccaatgg ccagtttgct
      421 ccgcctgagg tggtgaaaag cgtcggtatt ggcacgcgcg tgcggatggc gttttccgat
      481 gtggccgacg gtctggcgct gccacaatgg acgatcgacg aaactgcgac gcaaccggca
      541 aaaccctggc gctatccgca agagtaggac gttgatgctc gtgaaccttg caacgtcatc
      601 ctcgggctta tcccgaggag ctcgtcgctc acgtgccgtg ccgtgaagca agaagacgtc
      661 ctgcggcatc cgccgtctgt gctgaccccg gcgcagcgag atagctattt cgaaaatggc
      721 tatctcgccg ccgaggggct gatccctgat gcgtggttgc gccgtctgcg cgaactatcg
      781 gcagaatttc ttgacgccag caagctgatc gatagttcga acgaggcgtt cgatctcggc
      841 ccgcaacatc gcccggacca gccgcatgtg cggcggttgc gggcgctggt ggaccggcat
      901 ccggatttct ggcgttttgc cagcgagtcg gtgttggctg atatcgccgc cgacctggtt
      961 ggtcctgacg tcaaattcca tagtgcgaaa ttgaactaca agtggcctgg tccaggcgaa
     1021 attgtcgact ggcaccagga tatccctgcc tggccgcaca ccaattattc cccgctcacc
     1081 ctgggcgtat atctcgatga cgttccggcc gagcaaggac cgttgacctg cattcccggg
     1141 tcgcagcaag gcccgatctt cgtgcatcgt aatgacaccg gaaactggac cggatcgatc
     1201 cggcagcgtg acatgctgac ggtggaccgg tctcgcgccg aggatctgac cggcactgcc
     1261 ggcaccgtga ttgcgatcaa ctgccggacc atccacgcct cgcgcgccaa tatgaccgaa
     1321 cgcgtacggc cggtggcgtt gttcgtttac agttcggccg acgcgtttcc gtggaccgcc
     1381 gcgccgacac cgaccagcca caccggggat atcgtgcgcg gccaaccagc ccagacggca
     1441 cagttggatg caacgccgtg cccagtaccg ccggactgga gcaagatcgg ctatggctcg
     1501 atcttcagcg tgcaacgtag cggggaggcg agttagtggc actgcgcagc tttctgttcg
     1561 cccccggcaa tcacgcgcgg cgggtggaga aggcgctgac cctgcccgcc gacgcggtca
     1621 tcctggatct ggaagacgcc gttgccatca gtgaaaaacc cgcaacgcgc gaactggtgg
     1681 tggccgtgtt cgggcagccc agacacggcc ggctctacgt tcgggtcaat gcgtacacga
     1741 cggaatggtg tcatggcgac atcgttgcga tcgcgcgagc cggcctggac ggcatcatcc
     1801 tgccgaaagt cgagaccgcc aatcagctgc agtcgatcga ttggttgctg gccaacctgg
     1861 aacgcgagcg cggcctgccg atcggtggca tcgacctcgt tccgatcatc gagacggcgt
     1921 ccggtatgag caacatcggt gcgatagctg ggtccggctc gcgcacgaaa cggctggcat
     1981 tcggggcagg ggactatacc ctcgatctcg gaatggtctg gtcgcgtgac gaagcggaat
     2041 tgctgccggc ccggtcggcg gtcgtcatgg cctcccgcgc ggccggcatc gagccgccgt
     2101 tggataccgt ctgggctgat ctgcgcgatg ccgaggggtt tgcgcgttct gccgagagcg
     2161 cggctgcttt gggctttcag ggcaagatgt gcatccatcc cgatcagatc gccgtcacca
     2221 acaccgcatt ctccccatct ccgcaacaat tcaactgggc tttgcgcgtt gtcgcggcgt
     2281 tcgaagaagc ggaagcgaat ggactcgcgt cgatccagct cgatggccag ttcatcgatt
     2341 atcccatcgt ccaacgagcg cgccaggtcg tggcgcgagg agccgcataa tgttcgatat
     2401 ccaggccctg caaggctgcc gcgtgctgga tgtcgcatca tttctggccg gcccgtttgc
     2461 ggcgacgcaa ctcgccgagt tcggcgccga ggtgatcaaa gttgaactgc cgggtgtcgg
     2521 cgatgccacg cggcgcttcg gcaccatgac cgaatgcggc gatacgctgc cctggctgtc
     2581 ggaatcgcgc aataaaaagt gcatcacact ggatttgcgc aagcccgacg gtgttgcgct
     2641 gattaagcgg ctggtcgaac aatccgacgt gctgattgag aactttcaac ccggcacgat
     2701 ggagcgttgg ggtctgggct gggacgttct gcacgcagtc aacccacggc tgatcatggt
     2761 gcggatttcc ggctacgggc aaaccggccc gtatcgcgat cggccaggtt ttggccggat
     2821 tggcaacgcg tttggcggtc tgtcgtttct ggctggatat cccgatcgag caccggtgac
     2881 acccggctcg gcgaccattc ccgattacat ggccggtctg tacggcgcgt tcggtacttt
     2941 gctggcgctg caggcacgcc agaagaccaa tgaagggcag atgattgaca tcggtcttta
     3001 tgaaccgatc ttccgcattc tcgatgagct ggcaccggcg tttcaataca aagggtatgt
     3061 gcgccaacgc atgggacccg gcacggtcaa cgtggttccg cacagccatt atcccaccaa
     3121 ggaccaacgt tggatcgcca tcgcctgcac gaatgacaag atctttgccc gtttggcgga
     3181 ggcgatgcag cggcccgatc tggcggagcg ttggagcacg ctggcggcac gtgaacggga
     3241 ccggcccatc gtggatgaaa ccgtcggagc ctggaccgcg caattcgacc gcgccgattt
     3301 gttgcggatg tgtgaggcct cgcaggtgcc gtgcggtccg gtttattcga tcgatgaaat
     3361 cttccaggac ccgcactacg cagcccgtga aaacatccta cgcgtcgatg atcctcgggt
     3421 cgggcaactg gcgatcccca atctcgtgcc taaacttagt gccacgccag gtcacgttaa
     3481 ctggctcggc ccggagcttg gcgcgcacaa cgacgaaatt tatcgcggcc tgttaggcat
     3541 ggatgaagca gaactgcaac gtctgaagga tgccgctgtc atttgaagcc ggtaagaaag
     3601 cccgtgtcct tcgcgccctc ggtgtccttc gtgataatgc gaccgcgcca caaacacgga
     3661 cgctcccagg tagctgccag ccggtgccgc ccgcttatgt catcccggtc cgcatttacc
     3721 acaaaggaca ccgaggacac ggagctttct tcggatcgct aaaggccctc gcctgctttc
     3781 acgaagcgtt ccactgtttt caagtacggg tcgatctcac gatcttccgg tgccgccatc
     3841 acgtgctgga tgccagccgc tttgtaagcc gccaacgccg cgcgcgagtc acccacgttg
     3901 ttttcgttga tgttgatccg cagtgagatg gtaaaatcgt cacctggccg cacggcgcgg
     3961 aatcgtttca ccacgtccgc ggctgagtct ggccgaacac ggctgccgtg ccagccatcc
     4021 agccgcagcg cacggttgat tgctgcatcg gacgagccac cgatccatat cggaatcggt
     4081 ttcaccggct gcggctgagt ccgcatgttg tcgatcaccg ctggaatgta ccgagcggta
     4141 aagctgacgg ggtcctggct ccacaccgcc ttcatcatgg cgatgccttc atccatgcgt
     4201 cgcccacgtt ccctgaacgg tacgcccaga gcgtcgaact cggcttccag ccagccaacg
     4261 ccggcaccca aaatcagccg tcccttcgac agattttgta acgttgccag ttctttcgcc
     4321 aacggcaacg ggtggcgcat cggcaacacc agcacggagg tgcccaaccg cacccgcgcg
     4381 gtgcacgccg ccgcccaggt cagggtcagc accggatccc agaagttagg cgacggagga
     4441 taaccgccgt ccttcggaac gatgatatgt tcgctgaccc agacatcggc aaagcccagt
     4501 tgctcggctt gcattgcggc gcggcggata ttttccggac tggccttgcg gccgatatgc
     4561 ggcagatgaa tcccgagttg catcatcggt tcctttcgtt acgttgccgt cgcatcctgc
     4621 aagatcatgt cggacgcctt ttccccgatc atgatggtgg gagcgttggt gttgccggcg
     4681 atgatgaccg gcatgaccga ggcatcgacc acgcgcagcc cgcccagacc atgcacgcgc
     4741 agcctgggat cgacgacggc catcggtccg cgccccatgc cgcaggttcc caccggatgc
     4801 aggttggaga taccgcgttc cctcgtatcg gcgatcatct cgtcgtcagt gcgaacatta
     4861 accccaggcg aggtctcttc aacgaccaat ttctgcatcg cctgctgacg cacgatctgg
     4921 cgggccagcc ggatcccgta cagcattacc tgcatgtcgt aatccgactt catgaagtcg
     4981 aaatgaatgc gcggcggcgc gaatggatca ctcgaaccca gtcgaacggt gccgcgtgct
     5041 tcaggccgca aatgcaccgg actgatggaa attccaggat gcggatgcga aatgatgccg
     5101 ttgcggtcgc ggccgatcgt gctccaacag gaaatattca tttgcagatc cggccgttca
     5161 aaccgaggat cggtgcgcac cagggccccc acataaagcc cgttgccggt cattggcccg
     5221 tcgcgcaaga acacatagcg ggcgccggcg atcattcgat ccttgaagct gtactgcaaa
     5281 gaattcaacg acagattgcg cgaaagccga taggtgcaga acgtattgaa gtgatcctgc
     5341 aggttcgacc cgacgcctgg cagttcgtgc acgacttcga tccccttgtc gcgcaaatgc
     5401 tcgcccggcc c
//
LOCUS       DATAVD010000821         1556 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_79624, whole genome shotgun sequence.
ACCESSION   DATAVD010000821 DATAVD010000000
VERSION     DATAVD010000821.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79624"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..597)
                     /locus_tag="VHX39_15695"
     CDS             complement(<1..597)
                     /locus_tag="VHX39_15695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992611.1"
                     /translation="MHRRFSSLWPKLLVLAVPAVLAVPAFGVSCMTQSQMPSAQRTIL
                     AQSAQMIGANVESGNAAAVRNQTIASVAAQFDGIANSIQSVNASIQRATLTVDAVYLL
                     DASDLKAPQETQFFCGVAGSALTVEVTIPGLPPGKFALAILHATGVKQPQQISLILQN
                     DPAGSADWKLAGFFTRPMMMGGHDGLWFWRQAREYAAKK"
     gene            1040..1516
                     /locus_tag="VHX39_15700"
     CDS             1040..1516
                     /locus_tag="VHX39_15700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992612.1"
                     /translation="MTLSGGSLAVRANNSSLSDILKDLSSTSGMTVDGFEKDTRVFGV
                     YGPGTPRDVISELLDGAGYNFLMVGSTDAGTPREIVLTTRGNAPLANPQPGSISQPDE
                     DDEPINNPMEQVAPPMLPTPMQPDQRQQPRTPQEMLQELQRIRQQQGQGQGQPQPQ"
BASE COUNT          308 a          438 c          540 g          270 t
ORIGIN      
        1 ctttttcgca gcgtattcgc gcgcctggcg ccagaaccag aggccgtcat ggccgcccat
       61 catcatgggg cgggtaaaga agccggcgag cttccagtcg gcgctcccgg ctgggtcgtt
      121 ttgcaggatc aaggaaattt gctgtggctg tttgacaccg gtggcgtgca ggatggccag
      181 agcgaatttg cccggaggaa ggccggggat ggtgacttcg acggtgagcg ccgatccggc
      241 aacgccgcaa aagaactgcg tttcctgagg tgctttcagg tcggaggcat cgaggaggta
      301 gaccgcatcg acggtgaggg tggcgcgctg gatggaggcg ttgacggact ggatggagtt
      361 ggcgatgcca tcaaactgag cggcgacgct ggcgatggtc tggttgcgaa cggcggcggc
      421 gttgccggat tcgacgttgg cgccgatcat ctgggccgac tgggcaagga tggtgcgctg
      481 ggcgctgggc atctgcgact gggtcatgca ggagacgccg aaggccggaa cggcaagaac
      541 ggcgggcacg gcaagcacaa gaagtttggg ccaaaggctt gaaaagcggc ggtgcattcg
      601 ggacttccct tcaattcgcc gatgagcgaa ttcgaatcac tgctagtcta gtacacaggg
      661 gatcgagggg acgtcgaacg gacggcaccc ggacaatcct aagacttcga tgcaggttat
      721 gagcctttca cgatgcctgg tttgggcggt tgcaactgct ttcgcggttt cgtgtcatgg
      781 ccaggtgatg cagccaccgg gaacgatgcc gggcggccat caggttccag tgccggaacc
      841 gccggtgcac cacccagggg ttgcgcgtat tcctccgccg aggcaggcag ggacttcggt
      901 tccgcaggcg atgccggcac agccgggagc ggctcaggtt gagttgggca cgaccgcagg
      961 accgatgccg agtggggcac cgggcagcgc gtcaaatctg ccaccctcgc tattggacaa
     1021 gccggcaggc cacgccagcg tgacgctgag cggtggatcg ctggcggtga gggcaaacaa
     1081 ctcgagcctt tccgacattc tgaaggacct ctcgtccacc agcggcatga cggtggacgg
     1141 attcgaaaag gacacacgag tttttggagt ttatggaccg ggcacaccgc gcgatgttat
     1201 ttccgagttg ctggacgggg cgggttacaa cttcctgatg gtgggcagca ccgacgcggg
     1261 aacgccgcgt gagattgttc tgaccacgcg cggcaacgcc ccgctcgcga atccgcaacc
     1321 cggttcgatt tcgcagccgg acgaggacga cgagccgatc aacaatccga tggagcaggt
     1381 cgccccgccg atgctgccaa cgccgatgca gccggatcag cggcagcagc cgagaacgcc
     1441 acaggagatg ctgcaggagc tgcagcgaat ccgccagcag cagggccagg gacagggcca
     1501 gccgcagcct cagtaactca tccacaattt tgtcatcctt tgctccagcg tacctg
//
LOCUS       DATAVD010000822         1930 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3240573, whole genome shotgun sequence.
ACCESSION   DATAVD010000822 DATAVD010000000
VERSION     DATAVD010000822.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3240573"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..352
                     /locus_tag="VHX39_15705"
     CDS             <1..352
                     /locus_tag="VHX39_15705"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3992613.1"
                     /translation="AERLAERPIFVSVSRYEPFGLAVLEAARAGCALVLSDIPTFREL
                     WQDAASFVPADDPVAIAAALQVLLEQPDRRRQQSTQAAKRAALYGVARMTERMLTIYA
                     SASTSFRGGQQAAA"
     gene            349..1461
                     /locus_tag="VHX39_15710"
     CDS             349..1461
                     /locus_tag="VHX39_15710"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3992614.1"
                     /translation="MKIAYFTHSLRSCWNHGNAHFLRGVLRALIALGHEAVAFEPQHG
                     WSMANLLRDHGEAAILPFQRAYPELVSLFYDTADDPAELCDGADVVIVHEWNDPALVQ
                     RIGHLRRGGAAFTLLFHDTHHRAVSDPNAVRAFDLNGYDGVLAFGASLSEVYRTWGWA
                     DRVFVWHEAADITLFRPPSNDALRAGLVWIGNWGDGERSAELTNYLLRPSRRAELNLD
                     IHGVRYPREAFDALTSFGAVYRGWLANVAVPGVFARYLATVHVPRRFYVDALPGIPTI
                     RVFEALACGIPLVSAPWNDAEGLFREGSDYLVGRNEAEMARHLLALQAEPEQRASLVS
                     HGLETIRARHTCAHRANELLEIDRQIRSSGIKAAAQ"
     gene            1458..>1930
                     /locus_tag="VHX39_15715"
     CDS             1458..>1930
                     /locus_tag="VHX39_15715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992615.1"
                     /translation="MKIAFYGSSLLSSYWNGAATYYRGLLRDLARRGHDITFYEPDAF
                     ERQSHRDIDPPDWARVVVWPATETMARQVSEEAAFADVVVKASGVGAFDDLLLAQVMA
                     AARADAIKVFWDVDAAATLDEIRTTGPSHPIRQALTSLDFVLTYGGGEPVVTAYQA"
BASE COUNT          335 a          563 c          613 g          419 t
ORIGIN      
        1 cgccgagcgt ctggcggagc ggccgatttt cgtttcggtg tcccgctacg agccatttgg
       61 cctggcagtg ctggaagcgg cacgcgccgg ctgcgccctg gtcttgtccg atattccgac
      121 atttcgggaa ctctggcagg acgccgccag cttcgttccc gccgatgacc cggtggcaat
      181 tgccgcggcg cttcaggttt tgctcgaaca accggatcgc cggcggcaac aaagtacgca
      241 agcagcgaag cgagccgcgc tttatggtgt cgcgcgcatg actgaacgca tgctgacgat
      301 ttacgccagc gcgagcacat cgttccgtgg tggccaacag gccgcagcat gaagatagca
      361 tatttcaccc attcgctcag gtcctgttgg aatcatggca acgcccattt tctgcgcggc
      421 gtactgcggg ctctgatcgc actgggtcat gaggcggtgg cgtttgagcc gcagcatggc
      481 tggagtatgg caaatctgct acgcgatcat ggtgaggcgg cgattctgcc gttccagcgt
      541 gcttatccgg aactcgtctc gctattttac gatacggcgg acgatcctgc cgaactttgc
      601 gacggtgcgg acgtggtcat cgtgcacgag tggaacgatc ccgcgttggt gcaacgcatt
      661 ggacatctgc gtcgcggtgg tgcggcgttc acgttgctgt tccatgacac gcaccaccgc
      721 gccgtgagcg acccgaatgc ggtgcgcgcc ttcgatctca atggttatga tggtgtgctt
      781 gcttttggtg catcgctctc cgaagtgtat cgcacatggg gctgggctga tcgcgttttc
      841 gtctggcatg aggcagcgga catcacattg ttcaggccgc cgtccaacga cgccttgcgt
      901 gccggtttgg tctggatcgg taactggggc gacggagaac gcagcgctga acttacgaac
      961 tacctgctgc gcccgtcgcg ccgggcggaa ttgaacctcg acattcatgg cgtgcgctat
     1021 ccgcgtgagg cattcgatgc gctcacgtca ttcggcgccg tatatcgtgg ctggctcgcg
     1081 aacgtggcgg tccctggcgt tttcgcgcgc tatcttgcga ccgtgcacgt tccaagacgg
     1141 ttttatgtgg acgcgcttcc cggcatcccg accatccgag ttttcgaggc actggcctgt
     1201 ggcatcccac tcgtcagcgc gccgtggaac gatgccgagg gtttgttccg agaaggcagc
     1261 gattacctcg tgggacgcaa tgaagctgaa atggcacgtc atttgttggc attgcaggcg
     1321 gagcctgagc agcgcgccag tttggtcagc cacgggctgg aaaccattcg ggcccggcat
     1381 acctgcgccc atcgcgcaaa cgaattgctc gagatagacc ggcaaatccg atcctctggt
     1441 atcaaggcgg ccgcgcaatg aaaatcgcgt tctatggttc cagtttgctg tcttcctact
     1501 ggaacggtgc ggccacgtat taccgagggc tgctgcgcga cctcgcccgg cgaggtcacg
     1561 acattacatt ttacgagcct gacgcctttg aacgtcagtc ccatcgcgac atcgatccgc
     1621 ccgattgggc tcgcgtcgtg gtatggccgg cgaccgaaac aatggcgcgt caggtgtccg
     1681 aggaggccgc atttgccgac gtggtggtga aagccagcgg cgtcggtgcc ttcgacgacc
     1741 tcttgctggc ccaggtaatg gcggctgcaa gggcggacgc gatcaaggtg ttctgggatg
     1801 ttgacgcggc ggcgacattg gacgagatac gcacaaccgg gccttcgcat ccgatacggc
     1861 aggcgctgac ctcgcttgat ttcgtgctga cttacggcgg aggcgaacct gtcgtaacgg
     1921 cttatcaggc
//
LOCUS       DATAVD010000823         1971 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2309987, whole genome shotgun sequence.
ACCESSION   DATAVD010000823 DATAVD010000000
VERSION     DATAVD010000823.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1971
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2309987"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1039
                     /locus_tag="VHX39_15720"
     CDS             <1..1039
                     /locus_tag="VHX39_15720"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX3992616.1"
                     /translation="PQPILQALARQAAELINCSPAFYNDQMIRLSELLARHSGLHHVF
                     LANSGAEANEGAIKLARKWGAKHRDGAYEIITMDHGFHGRTLATMAASGKPQWEQLYA
                     PKVEGFVKVQLNDLDAVAAAITPKTVAVMLEPIQGEAGVFEATVPFLRGLRELTRERG
                     LLLILDEIQTGIGRTGRLFGFEHADIRPDIMTLAKGLGGGVPLAALVAHRDVCCFEYG
                     DQGGTFCGNPLMAAVGCAVIEEVTRPGFLTRVVQAGNYLANQLSMLSHRHGLGEVRGL
                     GLLLALDLRRDVAAKIVDLALARGLLINGPRPDSLRFMPALTVTNHEIDRMTEILDGV
                     LSDVALTGTRA"
     gene            complement(1131..>1971)
                     /locus_tag="VHX39_15725"
     CDS             complement(1131..>1971)
                     /locus_tag="VHX39_15725"
                     /inference="COORDINATES: protein motif:HMM:NF014804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX3992617.1"
                     /translation="GDAITPYYDPMIAKLIVWGADRDAAVRRLATALGTYEVVGVGTN
                     LGLLQAIAGSPAFRAADLDTGFIGRHIHLEPAGDAPEPAVLAAAAMAILDGQRLVAPA
                     DPWDLADSFRLNGEGDQEVLLRTGDKVVTIRAAWQSPGTYRLRIDGGSAIARVEADGI
                     SLDGVMHRTHVVRLGVELTVIHRGRNHVFELVDPLVPAGAHGAGEDRVVAPIPARVTH
                     VLVQAGDSVTKGAGLIVLEAMKMEITLTAPRDGTIDVIRYVVGDMVEEGTELIHFAET
                     AAA"
BASE COUNT          388 a          643 c          579 g          361 t
ORIGIN      
        1 gccgcagccg atcctccagg cactggccag gcaagccgct gaactgatca actgcagtcc
       61 tgcgttttac aacgaccaga tgatccggct ttcggaactg ctggcacggc atagcgggct
      121 gcatcacgtg ttcctcgcca acagcggtgc cgaagcgaac gaaggagcga tcaagctcgc
      181 gcgcaaatgg ggcgcaaaac atcgcgacgg ggcttatgaa atcatcacca tggatcatgg
      241 gttccatggc cgcacgctcg ccaccatggc ggcgtccggc aaaccgcaat gggagcagtt
      301 gtacgcgccg aaagtggagg gctttgtgaa agtgcaactc aatgacctgg acgcggtcgc
      361 agcagcaatt acgccaaaga cggtcgccgt catgctggag ccgatccagg gcgaggccgg
      421 tgtgttcgag gcaacggtgc cgttcctgcg cggcctgcgc gaactgaccc gggaacgggg
      481 attgctatta atccttgacg agattcagac cgggatcggc cgcaccgggc gcctgtttgg
      541 tttcgagcac gctgacatca ggcccgacat catgacgctg gcgaaaggtc tcggcggcgg
      601 cgtgccattg gccgcgcttg ttgcccatcg cgatgtctgc tgcttcgaat atggcgatca
      661 gggcggcacg ttctgcggta acccgctgat ggccgctgtc ggttgcgcag tcatcgagga
      721 agtgaccagg cccggcttcc tgacccgcgt cgtgcaggcg gggaactatc tggccaacca
      781 gttgtccatg ctttcgcacc gccacggtct cggcgaggtg cgcggtcttg gtttgttgct
      841 tgccctcgat ctcaggcgag atgttgcggc gaagatcgtt gatctggcgc tggctcgtgg
      901 cctgctgatc aatggaccac ggcctgattc gctccgcttc atgcccgcac tgaccgtcac
      961 caatcacgaa atcgaccgca tgaccgagat ccttgatggc gtgctgtcgg acgtggcgct
     1021 caccggaacc cgcgcatgag cttgcaagtg tgtggcgaca ttggacgacg atcctggctc
     1081 gatacgacta cgatgccgtt ctgaccggcg gtgaacccgc cgcggcatga tcacgccgcg
     1141 gcggtttccg caaaatggat cagttccgtg ccttcctcga ccatatcgcc aacgacatag
     1201 cggatcacat cgatcgttcc atccctgggt gcggtcagcg taatttccat cttcatcgcc
     1261 tccagaacga tcaacccggc gcctttggtc acgctatcgc cggcctgcac cagaacatgc
     1321 gtgacccgag ccgggatcgg agccaccacg cgatcctcgc ccgcgccatg tgcacctgcc
     1381 ggaaccagcg ggtcaaccag ttcgaaaacg tgattgcggc cgcgatggat gaccgtcagt
     1441 tccacgccca ggcgaaccac gtgcgtgcga tgcatgacgc cgtccagact gatcccgtcc
     1501 gcttcaaccc gagcgatcgc agaaccacca tcgatccgca gccggtatgt gcctgggctt
     1561 tgccatgccg cacggatcgt caccaccttg tcgccggtgc gcaacaaaac ctcctgatcc
     1621 ccctctccat tcaggcgaaa cgaatccgcc aggtcccacg gatcggcagg cgcaacgaga
     1681 cgctggccgt ccaatatcgc catcgccgcg gcagccaaca ccgccggctc cggcgcatcg
     1741 cctgcaggtt caagatgaat atgccggcca atgaagccgg tatccaggtc ggccgcacga
     1801 aacgcaggac ttcctgcaat ggcttgcaac aatccgagat tggtgccgac accgacgacc
     1861 tcgtacgtgc ccaaagccgt cgccaaccgc cgcaccgctg catcccgatc ggctccccaa
     1921 acgatcaact tggcaatcat cggatcgtag tacggggtaa tggcgtcacc c
//
LOCUS       DATAVD010000824         3181 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1752695, whole genome shotgun sequence.
ACCESSION   DATAVD010000824 DATAVD010000000
VERSION     DATAVD010000824.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3181
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1752695"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(651..1856)
                     /locus_tag="VHX39_15730"
     CDS             complement(651..1856)
                     /locus_tag="VHX39_15730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010668084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HEX3992618.1"
                     /translation="MRPPVEVADIFHRHGAAWRAEHAGHLSLQQLKVMSAIETCRTAA
                     LGGHIEGCEGCGHRRIAYNSCRNRHCPKCQGAAARKWLAMRQADLLPVGYFHVVFTVP
                     SEIADIAFHNKATVYDLLFQAASETMLTIAADPRHLGARIGITAVLHTWGSAMTHHPH
                     IHMVVPGGGISRDGKSWVSSRPAFLLPVHVLSKLFRRLFLTRLIELHAAGRLQFFSGQ
                     AGLSERRAFLRHIAPLRKKNWIVYAKAPFAGPEAVLAYLSRYTHRVAISNRRLISIDK
                     TGVTFRYKDYRREGPDRQRTMTLAADEFIRRFLLHVLPKGFHRIRHYGLLASGCRKAN
                     VARARELLVVAPAQSPTPETGASGEPEDHRPPCPCCGGRMIIIEVFERKTQPRGPPRA
                     PLRTRMIAS"
     gene            complement(1864..2769)
                     /locus_tag="VHX39_15735"
     CDS             complement(1864..2769)
                     /locus_tag="VHX39_15735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEX3992619.1"
                     /translation="MSNQPAQPAVSPLRQRMLEDMTMRGLREDTQRDYIRIVRSFAAF
                     LGRSPDTANAEDIRRFQIHQHENGAQPPTINCSVSALRFFFTITLDRPDLSRRLVLIR
                     YPRKLPDVLSVEEVGRLLEAAPGAKYKAALGTAYGAGLRVSEVAALKIDDIDSNRMLI
                     RVEQGKGRKDRNAMLSPQLLELLRLWWREGRRRNVILPHGWLFPGQSRTDPISTRQLH
                     RAVHEAAETAGIRKRVSPHTLRHSFATHLLEQDVDIRVIQVLLGHSKLDTTALYTRVA
                     TRTIRAVTSPLEKLASLMEGRSPTG"
BASE COUNT          574 a          926 c         1048 g          633 t
ORIGIN      
        1 ctgtcacggc tcgacgtggg caaatcgccg aggcacgttt cgcgtgtgat cagcggacac
       61 atgctcgcag ccgagtggcc gaattgcgcc ccgtttctaa taatctgctc ttgccgcggt
      121 ggcgcgatgc cgcctctgcc aggtggcctg gagtgtccgc tcccgggata gcgcgatggg
      181 ccgctctgtg acggggccgg gtcgaatgct gtctggcggc ttacgcgaag tttgggtggt
      241 aaagcgcctg tccgctatcc ggcgaggact ggattaagcg gacattcatc gtttgacggc
      301 cttggtgaag gatttcggat gccgacctgc acgaggccat ccacgcgcac gaggtcggcg
      361 tccgaaatcc gcccaaggac gtacccgcga tccacaagca acactatggg gttttatgaa
      421 tcctgctgcg gaaacggctg agggatagag acatatttgt tgttttgcgg attgtcccac
      481 ccttgagtga aggttgtcag ctgaggttct tgcttgcttt gatggtggga ggcacgctga
      541 tatctgcata atccgtgtcg acttcagcat acctgctggt ctttgggcac gtctgttcgg
      601 cgccggaagc cggtttgttt cggggcgaag ttggggttgg ccgtgctggg tcacgacgcg
      661 atcatccggg ttcgcagtgg cgcccgtggc ggcccgcgcg gttgggtttt gcgttcgaaa
      721 acctcgatga tgatcatgcg gccgccacag catgggcatg gcggccggtg atcttcaggt
      781 tcgccggacg cgcctgtttc tggcgtcggc gattgcgccg gcgcaaccac aagcagttca
      841 cgcgcgcggg cgacatttgc cttacgacag ccgctggcca gcagaccgta gtggcgaatg
      901 cgatggaacc cttttggcag gacatgcagg agaaagcgcc ggatgaactc gtcagctgcg
      961 agcgtcatcg tccgttggcg gtcgggaccc tcgcggcgat aatccttgta gcgaaaggtc
     1021 acgcccgtct tgtcgattga gatcaatcgg cggtttgaga tggcaactcg gtgggtgtag
     1081 cgcgacagat aggccagtac cgcctccggg ccggcgaacg gcgccttggc gtagacgatc
     1141 caattctttt ttctcagcgg cgcaatatga cgaagaaatg cccgccgttc gctcagcccg
     1201 gcttgaccgc taaagaactg gagccggcca gcggcgtgaa gctcgatcag cctggtcagg
     1261 aacagccgcc ggaacagttt ggagaggacg tggacgggca gcaggaaagc gggacgggaa
     1321 gatacccagc ttttgccatc gcgtgagatg cccccgcctg gcaccaccat gtggatgtgc
     1381 ggatggtggg tcattgccga gccccacgtg tggagcacgg cggtgatacc gatgcgcgcg
     1441 ccgagatggc gcggatcagc ggcgatagtg agcattgtct ctgaagccgc ctgaaacaaa
     1501 agatcataga ccgtcgcctt gttgtggaag gcgatatcgg cgatctcgct gggcacggtg
     1561 aagacaacgt ggaaatagcc gaccggcaac aggtcggcct ggcgcattgc caaccactta
     1621 cgcgctgctg caccctggca ttttgggcaa tgccggttgc gacagctgtt gtacgcgatg
     1681 cggcggtgac cgcagccctc acagccttca atgtggccac caagggctgc ggtacggcag
     1741 gtctcgatcg ccgacatcac cttcaactgc tggaggctca gatgaccagc atgctcggcg
     1801 cgccaggcgg cgccgtgccg atggaagatg tcggccacct ctaccggggg gcgcaccgcc
     1861 ggctcagccg gtcgggctcc taccttccat cagcgatgcg agtttctcga gcgggctggt
     1921 caccgcccgg atcgtccttg tcgcaacgcg ggtatagagg gcggtcgtgt ccagcttgga
     1981 atgtccaagc agaacctgga tcacacggat atcgacgtcc tgctccagca gatgcgtggc
     2041 aaagctgtgc cgcagcgtgt ggggcgacac ccgcttcctg atgccggcgg tctcggctgc
     2101 ttcatggaca gcacggtgga gctggcgcgt tgagatcgga tcggtgcggc tctggcccgg
     2161 gaacagccag ccgtggggca gtatgacatt gcgtcgccga ccctcgcgcc accagagccg
     2221 cagcagttcc agcaactgcg gtgacagcat ggcgttgcgg tccttacggc ctttgccctg
     2281 ttcgacgcgg atcagcatgc ggttgctgtc gatgtcgtcg atcttgagcg cggcaacttc
     2341 cgacacgcgc agcccggcgc cgtaggcggt gccgagtgcg gccttgtatt tggcaccggg
     2401 tgctgcctca agtaagcgcc cgacctcctc cacactgagc acgtctggca gcttgcgcgg
     2461 atagcggatc agcaccaggc gtcgcgacaa atcgggccga tcaagcgtga tggtgaaaaa
     2521 gaagcgcaac gccgagactg aacaattgat cgtcggcggc tgcgcaccgt tctcgtgttg
     2581 atggatctgg aaacggcgga tgtcttcggc gttcgccgta tcgggcgagc ggccgagaaa
     2641 ggcggcaaag ctgcggacga tacgaatgta gtcacgctgt gtatcttctc tgaggccgcg
     2701 catcgtcatg tcttcgagca tgcgctggcg caacgggctg acggcgggct gggcgggctg
     2761 gttgctcatc gggggctcct ctcgagctga aggttgaccc tccgatgctc gaaccccgat
     2821 cctctctcct caagccatca cgcacgccgc gatatcccgc tacctcatct caagcaccca
     2881 tcccgcgcga gcgggttcgt ccttgggccg tgaacggact ggccggtttg gagagggaga
     2941 gatcggatag cagacatggg gggattgcgc tcgcgcgtca tctccgatga tcgccagacc
     3001 gatcacgcct gaatcgccgc cattcccata tcccgtctcg tcccacgcaa gccaagatgt
     3061 cccactgtgc agttcgccag ttgctgaggg acggtattca tcttaggatt tccggctgat
     3121 ggcgcggaaa actatgacgg accgtggtgc ggggataacc atggtttctt ggtcggcgac
     3181 a
//
LOCUS       DATAVD010000825         2318 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1939996, whole genome shotgun sequence.
ACCESSION   DATAVD010000825 DATAVD010000000
VERSION     DATAVD010000825.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1939996"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            412..2211
                     /gene="ggt"
                     /locus_tag="VHX39_15740"
     CDS             412..2211
                     /gene="ggt"
                     /locus_tag="VHX39_15740"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX3992620.1"
                     /translation="MRALVLALSATTVLAQAPMANPPNPYTIVSPPPTVAKHAMVISI
                     HHDASDAGVEILKAGGNAVDAAVAVGFALAVVFPQAGNIGGGGFMLIRMKSGDSHFLD
                     YREKAPAAATANMYQDAQGNVVPGLSTLGYKSIGVPGTVAGLVYAQKHYGKLSLARDM
                     APAIKLAAEGYILSEEEANSLAHARNVAQFPESRRLFQRDGNFYKIGDRFTQPELART
                     LQRIAADPATFYKGTMATELAAAIQKGGGLITAADLAAYEVKDREPLTGSYRGYDILT
                     APPPSSGGIVLLEILNILSGYDLGKMGDRTPQQVHLITEAFRRAYMDRADYLGDPDFV
                     TMPVQQMIAPAYAAAWRKSIDPVTPTPSATLQRPAGFLPPPPAPVAPAHESTQTTHFS
                     VVDAEGNAVASTYTLNNTFGSGVTAGALGFLLNDEMDDFTSAPGVPNQFGLIQSANNA
                     IAPGKRPLSAMTPTIIVQPEKCRPGPSLKCAPGKPLLVLGSPGGATIITTVANDIISI
                     LDNGLNVQQAADAPRFHHQYLPDVLQVEKAFPQEVADQLRTNGYTVSHTNEADEHNPG
                     VWGDSEMIYIDPKTNTLEGGQDQRHKFGKAAGY"
BASE COUNT          492 a          874 c          568 g          384 t
ORIGIN      
        1 cctcgaacct cgaacctcga acctcgaacc tcgaaccttt acatttcgca tctctcacat
       61 tccaaagagt caaccccgcc ttttccacca ccgaatcctt gacacgcacg ataaaattaa
      121 cctaaggagc aaaagagttc cgcacccgcg ccgaaccctt cattgccctt tggacccagg
      181 tcccccaata ccgtctttga cattccgccg cagatccatc gaagccggat tcgtatctaa
      241 cccctttagg ccgaatattt taggggctta gtccggattg attcagaccc gcacccgtat
      301 ccgattcgaa tctaacccgt ttagatcgaa tattttagaa tctaaagtat ggggggaggg
      361 gggacccccc tccttccccg gttattctgt cttcaccgga gtttcccacc catgcgcgcc
      421 ctcgtcctcg cactctcggc caccaccgtt ctggctcagg cccctatggc aaatccgccc
      481 aatccgtaca ccatcgtcag cccgccgccc acggtcgcca aacacgcgat ggtcatcagc
      541 atccaccacg atgcctccga cgcgggcgtg gaaatcctca aagccggagg caatgcagtc
      601 gacgcagccg tcgcggtcgg cttcgccctc gccgtcgtct ttccccaggc cggcaacatc
      661 ggcggcggag gcttcatgct catccgcatg aagtccggcg actcccactt tctcgactac
      721 cgcgagaaag cccccgccgc agccaccgcc aacatgtacc aggacgcgca gggcaacgtc
      781 gtccccggcc tgtcgactct cgggtataaa tcgatcggtg ttccgggcac ggtcgccggt
      841 ctggtctacg cgcagaagca ctacggcaag ctttcgctcg cccgcgacat ggcgccagcc
      901 atcaagctag ccgccgaggg ctacatcctc tccgaggaag aagcgaacag cctcgcgcac
      961 gcccggaacg tggcgcagtt cccggaatcc cggcgcctgt tccagcgcga cggcaatttc
     1021 tacaaaatag gcgaccgctt cacccagccc gaacttgccc gcacgctcca gcgcatcgcc
     1081 gccgatcctg ccactttcta caaaggcacg atggccaccg aactcgccgc cgccatccag
     1141 aagggcgggg gactgatcac cgccgccgat ctcgccgcct acgaggtcaa agaccgcgaa
     1201 ccgcttaccg gcagctatcg cggctacgac atcctcaccg cgcctccgcc gtcctcaggc
     1261 ggcatcgtgc tgctggagat cctcaacatc ctctccggct acgacctcgg caagatgggc
     1321 gatcgcacgc cgcaacaagt ccacctcatc accgaagcct tccgccgcgc ctatatggac
     1381 cgcgccgact acctcggcga tcccgacttc gtcaccatgc ccgtccagca gatgatcgcg
     1441 cccgcgtacg ccgccgcctg gcgcaagtcc atcgatccgg ttacaccaac accttcggca
     1501 acgctgcaac gccccgccgg ttttctgcct ccgccgcccg cgcccgtcgc gcccgcgcac
     1561 gaatcaacgc aaacgacgca tttctcggtt gtcgatgcag aaggcaacgc cgtcgccagc
     1621 acctacacac ttaacaacac ctttggctca ggcgtcacgg ctggcgcgct cggcttcctg
     1681 ctcaacgacg agatggacga cttcacctcc gcgcccggcg tgcccaacca gttcggcctc
     1741 atccagagcg ccaacaacgc catcgcgccc ggcaagcgcc cgctctccgc catgacgccc
     1801 accatcatcg tccagccgga aaagtgccgc cccggcccca gcctcaaatg cgctcccggc
     1861 aagccgctgc tggtcctcgg ctcgcccggc ggagccacca tcatcaccac cgtcgccaac
     1921 gacatcatca gcatccttga caacggcctc aacgtgcagc aagccgcgga cgccccgcgc
     1981 ttccaccacc aatacctgcc cgacgttctg caggtcgaga aagccttccc gcaggaagtc
     2041 gccgatcaac tccgcaccaa cggctacacc gtttcccaca ccaacgaagc cgacgaacac
     2101 aaccccggag tctggggcga cagcgaaatg atctacatcg accccaaaac caacaccctc
     2161 gaaggcggcc aggaccaacg ccacaaattc ggcaaagcgg caggctattg aaaagcggca
     2221 ggctattgaa aagcggcagg ctattgagat gaggcgcgaa gagataagga ggcgaacgga
     2281 ggtactttca agcagtccgc atgtgcttcg ttggcgca
//
LOCUS       DATAVD010000826         4826 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_450744, whole genome shotgun sequence.
ACCESSION   DATAVD010000826 DATAVD010000000
VERSION     DATAVD010000826.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4826
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_450744"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..412
                     /locus_tag="VHX39_15745"
     CDS             <1..412
                     /locus_tag="VHX39_15745"
                     /inference="COORDINATES: protein motif:HMM:NF013853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF29 domain-containing protein"
                     /protein_id="HEX3992621.1"
                     /translation="RRVARGERMNEVDWDHVVEEIEDVGISELNAVQSYLDQILLNLL
                     KLHGWPELDSDHHWRPENFAFQTGLERRFAPSMRQRIDLAKIYNRAKRQIGLIRYGGK
                     PALASPAICPVSLDQLLTASVEDLEAAFTAQPAS"
     gene            489..962
                     /locus_tag="VHX39_15750"
     CDS             489..962
                     /locus_tag="VHX39_15750"
                     /inference="COORDINATES: protein motif:HMM:NF013853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF29 domain-containing protein"
                     /protein_id="HEX3992622.1"
                     /translation="MPNELYDRDVVAWSEHQAALLRRLARGERVNDIDWDHVVEEIED
                     VGNSQLNAVHCYLRQMLAQLLKLSGWPGSDACHHWRNEVATFQVDAIARFVPSMRQRI
                     DLPRAYELAQRQLAPMRRGDPTGLPAPSTCPVTLDLLLTASVEDLEAAFTAALTG"
     gene            1097..1969
                     /locus_tag="VHX39_15755"
     CDS             1097..1969
                     /locus_tag="VHX39_15755"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEX3992623.1"
                     /translation="MPNHPLSFQDLILRLHSFWSQQGCIILQPFDAEMGAGTFHPATT
                     LRALGAKPWAAAYVQPSRRPTDGRYGENPNRLQHYYQYQVIMKPSPENAQELLLASYR
                     TIGLDPLLHDFRFVEDDWESPTLGAWGLGWEVWCDGMEVGQFTYFQQVGGIPVTLPSF
                     EMTYGLERLAMYVQDKENVFDLDFNGAGNGQPVKYGEVFLRAEREYSAFNFEYADTAL
                     LIRHFADAEAECASLLKHDLALPAYDQCIKASHLFNLLDARGVISVTERASYIGRVRT
                     LAKGCCEAWVAGDT"
     gene            1972..4158
                     /gene="glyS"
                     /locus_tag="VHX39_15760"
     CDS             1972..4158
                     /gene="glyS"
                     /locus_tag="VHX39_15760"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009345 - glycine-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEX3992624.1"
                     /translation="MPAFFLELFSEEIPARMQPHAAEDLSRLIAEALAGLSPTNIQTW
                     YGPRRIALAAEVSGQVAAVSATERGPRANAPEQALQGFLRKHAATRDQLRQEGDYWVL
                     EKQAAAVAAPMLIAAALPGVLRRFPWPKSMRWGGTSHFTWVRPLRRIVCLLDGEVVPF
                     DLRDGTDDGHSLVSGNLTEGHRFHAPGAFAVSGAADWTAKLRQRHVLVDVAERKRVIA
                     EGVARIAKERSITIVDDPGLLDEIAGLVEWPVPLAGRIADEHMDLPPEIRQVSMRVNQ
                     RYFAARSPNGDAAPWFVFAANIEAADGGAAIIAGNERVLRARFADARHFWDLDRKARL
                     DSRVPSLDHVTFHAKLGTQGQRVKRLRRLAEMIAPRVNAGEALADRAAELAKADLVTG
                     MVAEFPELQGVIGRYYALHDHEDAYVADAIRDHYAPRGPADPVPAAPVSIAVALADKL
                     DQLACFFAIDERPTGAGDPYALRRAALGVIRIIRENGLRLKLLPLLDSAVIGARQAAG
                     EHAAGLSDDQVVRVLNAHPGAVALVGANAARRVTRPVPGTELHVDLLAFDILEFLAER
                     LRVQLRTEGARHDVLTAVFAAGSDDDITRLLRRTEAVSTLLGQDDGANLLAAYRRAAN
                     ILRIEERKDGPHTDAPDSSLLAEPAEANLHRGIISGLAIGTLVHDEKYAEAMAEMAKL
                     RGPLDAFFESVTVNAAEPQIRRNRLRLLNQVRTTMDRVADFSRIEG"
     gene            4170..>4826
                     /locus_tag="VHX39_15765"
     CDS             4170..>4826
                     /locus_tag="VHX39_15765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HEX3992625.1"
                     /translation="MTRWVYGFGGGVNDGRADMKNLLGGKGANLAEMASIGLPVPPGF
                     TITSEVCTAYYDNHNRYPDDLKAQVDAALARIEAAMGQKFGDPDNPLLVSVRSGARVS
                     MPGMMDTVLNLGLNDATVEGLAKAAKDERFAWDSYRRFIQMYGSVVLGVDHHEFEEII
                     EFAKLEAGVTEDTGLTAADWRRVVAAYKDLVAKETGNPFPTDPQAQLWGAVGAVFGSW
                     M"
BASE COUNT          880 a         1576 c         1521 g          849 t
ORIGIN      
        1 gcgccgcgtt gcgcgcgggg agaggatgaa cgaagtcgac tgggaccacg ttgtcgagga
       61 gatcgaggac gtcggcatct ccgaactgaa tgcggtccag tcgtatttgg atcaaattct
      121 cttaaatctg ctcaagctgc atggctggcc ggagcttgac tccgatcacc attggcgacc
      181 cgagaacttc gcgtttcaga ccggcctgga gcgtcgcttc gcaccgtcga tgcggcagcg
      241 gattgacctg gcaaagatct acaaccgcgc caaacgacag attggcctga tccgctatgg
      301 cggcaagcct gcgctggcct cgcctgccat ctgtccggtc agcctggatc aactgctgac
      361 ggcgtcggtc gaagacctgg aagcggcatt taccgcgcaa cccgccagct aactgagatt
      421 tccccgggga gtggccacca ggcgccatat cgctggcaac atcccggcca acagcctaca
      481 ttcagctcat gcccaacgag ctgtacgacc gagacgtcgt cgcctggtcg gaacatcagg
      541 ccgccctgct gcgccgcctc gcgcgtgggg agcgagtgaa cgacatcgac tgggaccacg
      601 ttgtcgagga gatcgaggac gtggggaact cgcagcttaa tgccgtgcac tgctaccttc
      661 ggcaaatgct cgcacagctt ttgaagctgt ccggttggcc gggaagcgac gcctgccacc
      721 attggcgaaa tgaagtcgct accttccagg tggatgccat cgcccgtttc gtgccatcaa
      781 tgcggcagag gattgatttg ccgagagcct acgaactcgc gcaacggcag cttgccccca
      841 tgcggcgggg ggacccaacc gggctgccag cgccatcgac ctgtcccgtc acgctcgatc
      901 ttctgctgac ggcctcggtc gaggacctcg aagcggcatt taccgccgcc ctgaccggct
      961 gaccccgctc ccaggcacaa acctcgacaa cgcgtctggc tcgcctcccc gccaaccggc
     1021 cgcgatcccc gcgccttgcc ccacgcccgc ccgatgctct atgccgcgat gcaccaaccc
     1081 aaccgaaaaa ctccccatgc ccaaccaccc gctttccttc caggacctga tcctgcgcct
     1141 gcacagcttc tggtcgcagc agggctgcat catcctgcag ccgttcgacg cggagatggg
     1201 cgccggcacc ttccatcccg ccaccacgct ccgcgcgctt ggcgcgaagc catgggccgc
     1261 cgcctacgtg caaccctcgc gccgcccgac cgacggccgt tatggcgaaa acccgaaccg
     1321 gctacagcat tattatcaat accaggtcat catgaaaccc agtccggaga acgcgcagga
     1381 attgctgctg gcgagttacc gaaccatcgg cctggacccg ctgctgcacg atttccgctt
     1441 cgtcgaggac gactgggaga gccccaccct cggcgcctgg ggcctcggct gggaggtttg
     1501 gtgcgacggc atggaagtcg gccagttcac gtatttccaa caagtgggcg gcatcccggt
     1561 caccttgcca agcttcgaga tgacctatgg cctcgaacgc ctggccatgt acgtgcagga
     1621 caaggaaaac gtcttcgacc tcgatttcaa cggcgcgggc aacggacaac cggtcaaata
     1681 cggtgaagtg ttcctgcgcg ccgaacgcga atacagcgca ttcaatttcg agtacgccga
     1741 caccgcgctg ctgatccgcc atttcgccga cgccgaggca gagtgcgcgt cgttactgaa
     1801 gcatgatctg gcattgccgg cctacgacca atgcatcaag gccagccatt tgttcaatct
     1861 gctggacgcc cgcggcgtga tcagcgtgac cgagcgggcg agctatatcg ggcgcgttcg
     1921 taccctggcg aaaggctgct gcgaggcctg ggttgcgggg gacacctgag catgcccgca
     1981 ttcttcctag aacttttcag cgaggaaatc ccggcgcgca tgcaacctca cgccgccgag
     2041 gatctgtccc ggctgattgc cgaggcgttg gccggtctgt ccccgaccaa catccagacc
     2101 tggtacggcc cgcgccggat tgctcttgcc gccgaggtca gcggtcaggt cgccgcggtc
     2161 agcgcgaccg aacgcggacc acgggccaat gcacccgagc aggcgctgca aggcttcctc
     2221 cgcaagcatg ccgccacgcg cgaccagctg cgtcaggagg gcgattactg ggtcctggaa
     2281 aaacaggccg ccgcggtcgc cgcgccgatg ctgatcgccg ccgccctgcc aggagtgctg
     2341 cggcgtttcc cctggcccaa atcgatgcgt tggggtggca ccagccattt cacctgggtt
     2401 cgtccattac gccggatcgt ctgccttctg gacggcgagg tggtgccatt cgacttacgc
     2461 gatggcaccg atgacggcca cagccttgtc tcaggcaatt tgaccgaggg acaccggttc
     2521 cacgcgcccg gtgcattcgc cgtctcggga gccgctgact ggactgcgaa actgcgccag
     2581 cgacacgtgc tggttgatgt cgccgaacgg aaacgcgtga tcgccgaggg cgtcgcccgc
     2641 attgccaagg aacgatcgat tacgatcgtc gatgatccgg gcctgctgga cgaaatcgcc
     2701 ggcctggtgg aatggccggt cccgctggcc ggccggatcg ccgatgaaca catggacctg
     2761 cctccggaaa tccgccaggt ctcgatgcgg gtcaaccagc gctacttcgc cgctcgcagc
     2821 ccgaatggcg acgccgcccc ctggtttgtg tttgccgcca acatcgaggc cgcggatggc
     2881 ggtgcggcaa tcattgccgg caacgaacgc gtgctgcggg cccgcttcgc cgacgccagg
     2941 cacttctggg acctggatcg caaggcacgg ctggatagcc gggtgccgtc gctcgaccac
     3001 gtgacctttc atgcgaaact cggcacccag gggcagcggg tgaaacggct gcggcgcctg
     3061 gcagaaatga tcgccccccg ggtgaacgcc ggcgaggcgc tggcggatcg cgcggcggag
     3121 ctggcgaaag ccgacctcgt caccggcatg gtcgccgagt ttccggaact gcaaggcgtc
     3181 attggccgtt actatgcgtt gcatgaccat gaggatgcct atgtcgccga cgcgatccgc
     3241 gatcattacg cgccgcgcgg tccagccgat ccggttccgg cggcgccagt ctcgattgcg
     3301 gtggcactgg ccgacaaact cgaccaactg gcatgtttct ttgccatcga cgagcgtccg
     3361 accggcgccg gcgatcccta cgctctgcgg cgggcggctc tgggcgtgat ccggatcatc
     3421 cgcgaaaacg gcctgcgcct gaaactgttg ccgttgctcg atagtgcggt cattggcgcc
     3481 cggcaggctg ccggcgagca cgccgccggc ctgagcgatg accaggtggt ccgcgtgctc
     3541 aatgcccatc cgggtgcggt ggcgctggtc ggtgccaacg ctgccaggcg ggtcaccaga
     3601 ccggtgccgg ggaccgaatt gcacgtcgat ttgctggcat tcgacattct ggaatttctg
     3661 gccgagcgcc tgcgggtgca actgcgcacc gagggggccc gccacgatgt gctgaccgca
     3721 gtgttcgccg ccggatcgga tgacgacatt acccgcctgc tccgccgcac cgaggcggtc
     3781 agcacgcttc tgggacagga cgacggtgcc aacctgctgg ccgcctaccg ccgcgctgcc
     3841 aacattctgc ggatcgagga gcgcaaggac ggaccgcata ccgacgcccc cgactcgagc
     3901 ctgctggcgg aacccgccga agcgaacctc catcgcggta tcatctcggg tttggcgatc
     3961 gggaccttgg tgcacgacga aaaatatgcc gaggcaatgg cagaaatggc gaaattgcgc
     4021 ggaccgctgg acgcattttt cgaatccgtg acggtcaatg ccgcagaacc gcaaatacgt
     4081 cgcaatcgtt tgcgattgct taatcaggtg cggaccacga tggaccgtgt cgcggacttt
     4141 tcccggatcg aagggtaaat ggagcagcca tgaccaggtg ggtttacggt ttcggcggtg
     4201 gcgttaacga cggtcgcgcc gacatgaaga acctgttggg cggcaaggga gcgaacctcg
     4261 ccgaaatggc gtcgatcggc ctgccggtgc cgcctggttt caccatcacc tccgaggtct
     4321 gcacggcgta ttacgacaac cataatcgct acccggatga cctcaaggcg caggtcgacg
     4381 ccgctcttgc gcggatcgag gccgccatgg gccagaaatt cggcgatccg gacaatccgc
     4441 tgctggtgtc agtccgctcc ggcgcgcggg tgtcgatgcc ggggatgatg gacaccgtgc
     4501 tcaatctcgg gctgaacgac gcgaccgtcg agggactggc aaaggccgcc aaagacgagc
     4561 ggtttgcctg ggattcttat cgccgtttca tccagatgta cggttccgtc gtgcttggcg
     4621 tcgatcacca cgagttcgag gaaatcatcg agtttgccaa gctggaagcc ggggtaaccg
     4681 aagacactgg gctgaccgcc gccgattggc gccgggtggt cgcggcctac aaggatctgg
     4741 tggccaagga aaccggcaat ccgtttccga ctgacccgca ggcccagttg tggggggcgg
     4801 tcggcgccgt gttcgggtcg tggatg
//
LOCUS       DATAVD010000827        16080 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_826276, whole genome shotgun sequence.
ACCESSION   DATAVD010000827 DATAVD010000000
VERSION     DATAVD010000827.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 16080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16080
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_826276"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="VHX39_15770"
     CDS             <1..475
                     /locus_tag="VHX39_15770"
                     /inference="COORDINATES: protein motif:HMM:TIGR03083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="maleylpyruvate isomerase family
                     mycothiol-dependent enzyme"
                     /protein_id="HEX3992626.1"
                     /translation="ALPPNARLTWYGPDMGARMFATARQMETWAHGQAIYDLMGAKRQ
                     STDRLRNIAEIGVRTYGWTFANRDQPVPGPAPHVRLAGPSGVSWEWNDRSPDNSIDGD
                     ALDFCQVVTQTRNVADTRLQVTGEPARLWMSLAQCFAGPPENPPPPGTRAAAAPR"
     gene            complement(472..1806)
                     /locus_tag="VHX39_15775"
     CDS             complement(472..1806)
                     /locus_tag="VHX39_15775"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007398591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3992627.1"
                     /translation="MRATNRQMHMGVFVLGTGNHTAGWRYEGAAASHLDLPVIQEIAA
                     IAERGKFDLLFISDAMAMDPTDHPSFMCRFEPTSLISVLSALTTHIGLGATVSTSFTE
                     PFNVARLFSSIDHLSGGRAAWNVVTSSNPKAALNFNREEHLEHELRYQRANEFVDVVR
                     GLWDCWDDGAIVADKATGQFIDEGKVRTLDHKGRFFQVRGPVNIARSPQGHPVIIQAG
                     GSPSGLALAARTADVVFSVVQDLEAAKRAYADLKGRMAQYGRSPDELAVLPGVMPIIG
                     ATHEEARERLATLQGWLTPTNAATLVASRIGYDVSGHPLDGPVPPPPSFQGSRTFSSV
                     LYETARRENMTLRDLYNLTAAARGHWVLCGTPESIADSLEEWFIERAADGFNILPPYF
                     PAAFTDFVDLVVPILQRRGLYRVDYQGRTLRDHLGLDRVTAMAPRRMAVGGG"
     gene            complement(1883..2332)
                     /locus_tag="VHX39_15780"
     CDS             complement(1883..2332)
                     /locus_tag="VHX39_15780"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3992628.1"
                     /translation="MKSRYGLEIRVAGGADAAGLCELLQTAGPVIAPRVMAERLEAMR
                     DAPGAALIAAEWGPPSGVVLLHWYRTLDAVQPTAQITMLLVAPDDRRRGIGRLLVKAA
                     AQAARVAGCGALELLAAPEEPALHAFCLATGFLEGGSRLLRPLRKKG"
     gene            2417..3310
                     /locus_tag="VHX39_15785"
     CDS             2417..3310
                     /locus_tag="VHX39_15785"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3992629.1"
                     /translation="MRIGFVGTGTMGNPIASCLIRAGHSLTVHDRNPDATAALCAQGA
                     VQVETAFAVARESEVVFTSLPGPAEFEAAMLQAQTGILAGLRPNTAHIDLTTNAPKTV
                     ARVAEACRQRGVELIDAPVSGRPPAMTVMVGASDAAFARYQPLFQAIAANVFHVGPSG
                     AGATAKLVTQYLGYTNFIASIEGMLVAAKAGIGLDTLARIVPVSAGQSRTFDNIPRSV
                     LPGTFTAGGTLDIVAKDIELACQLARDVGAPASLGTLAADFYKRAQALGWGQEGFTVV
                     ARVLEAMAGAELRTPQPGASQ"
     gene            3307..3846
                     /locus_tag="VHX39_15790"
     CDS             3307..3846
                     /locus_tag="VHX39_15790"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: protein motif:HMM:NF007479.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019380 - 3-phenylpropionate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate/cinnamic acid dioxygenase
                     subunit beta"
                     /protein_id="HEX3992630.1"
                     /translation="MTDDRVAGLLLTQEIANFLYTEAELLDERRHDEWLALLADDIRY
                     WMPMRRNVKYGDTTREFTREAEDINWFDEGKETLVRRVRQIQTGIHWAEEPQSRITHM
                     ISNVQLLHVTPDAATAREVTAKSRFLIYRNRVETETDLLVGKREDTLRRAGDSWLIAR
                     RKIILDQNVLMTKNLTFFF"
     gene            3900..5279
                     /locus_tag="VHX39_15795"
     CDS             3900..5279
                     /locus_tag="VHX39_15795"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX3992631.1"
                     /translation="MNATRGYHSGLVDLTSGQISREIFVNDDIYAQEQERVFARSWLF
                     VGHESQIPNPGDFFVSRMGEESVILCRDRTGAVRVFLNSCRHRGMKVCRYDDGNAAVF
                     TCPYHGWSYGTDGGLVGVPFFREAYHSELDKTKWGLVPVAQLCCYKGTVWANWDASAP
                     PFLEHLGEFRRFLDLILDGWDGREGQAELIGGVQKWIIPCNWKFPAENFSGDTYHNIS
                     HRSVDLVGAGPSGRSRRDYSELNVARKLHVALPDRGHQTITYVLPKDHQSQPAYQNSP
                     EVAEYFRHCEEERRRRPGPNTRLMGAPGEIFPNVALLPRQPRTLAVWHPKSAHETEVW
                     RFFFVDRDAPQQVKNFLRDYYIRYSGPAGMTEQDDMENWNYAHAASRGVIARRHPYTY
                     EMGMGHAVENYEWDGLEMPGRVIDLTKAQASEEPMRNLYHRWAQFMEADSWDQLMPWR
                     HEAAARAAQ"
     gene            5276..5476
                     /locus_tag="VHX39_15800"
     CDS             5276..5476
                     /locus_tag="VHX39_15800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992632.1"
                     /translation="MSDPINVRALAVGTRVMLGSGAEVEIVANPEDGVWLFARYLSSA
                     DDPALVGQEDMIFAQDVVEIRP"
     gene            5544..6614
                     /locus_tag="VHX39_15805"
     CDS             5544..6614
                     /locus_tag="VHX39_15805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3992633.1"
                     /translation="MVAEAKGPYRGTTRPDDVALNAWLAKRPAEAALEPDLPIIDPHH
                     HFWDQAHRGHYLLPQLLSDIGGGHNIVSTVFLECRAMYRKDGPREMAALGEVEFVNGI
                     AAMSASGGYGPCRVAEGIIGGGDLTFGAAKVRALLEAEIAAAGGRLRGLRHGVAWDNH
                     KAVADFASRTVPLHLVIDKTFREGFAQLAPLGLSFESWQYHPQLPDAIDLARSFPDTT
                     IILNHVGGILGVGPYAGHRQDVLAGWRKDIREMARCPNVYCKLGGLGMISVGFDFHER
                     DIPPSSEDLAAAWRQYIEPCIEAFGVERCMFESNFPPDKQSCSYTSLWNAFKRITASA
                     SATEKTALYSGTAAKVYRLTAP"
     gene            6637..7470
                     /locus_tag="VHX39_15810"
     CDS             6637..7470
                     /locus_tag="VHX39_15810"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3992634.1"
                     /translation="MDISGKTAIVTGAASGIGLGIATALAEAGANVVMADIQKDAVET
                     AAHALSGTNKRVMPVRIDVTQEQSVIDALAEAERNFGKLHIACNNAGVPTHGTSLVDV
                     PVRDWEFVIGVNIWGIIHGIRHFVPAILKHGEEGHVVNTASVAGFQNRRGTHQGPYSM
                     SKYAAVSLSEELENELEGTKVGVSVLCPGPINTNIARGARNRPDHLGGAQTRASEEAV
                     LAERLATTGLDPRIVGDRVVDAIMTGTFYAFVSAVPADVIKARHRRIEAALNSRWVTH
                     Y"
     gene            complement(7483..7908)
                     /locus_tag="VHX39_15815"
     CDS             complement(7483..7908)
                     /locus_tag="VHX39_15815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEX3992635.1"
                     /translation="MVALAIVLDVAFHSSGETVVNAAELAERTGMARRTLEPLLQALS
                     RERLLESTRGPHGGYRLGRPARLLKVSDVITIGLNSLEESAHDLSGRLQRAVIEPLWG
                     EFDAALVALTESLTIQDLLKRAAKAGLRKPVTDPLNFVI"
     gene            8212..9642
                     /locus_tag="VHX39_15820"
     CDS             8212..9642
                     /locus_tag="VHX39_15820"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding protein"
                     /protein_id="HEX3992636.1"
                     /translation="MTQSSDPDFAAASALRLIGPDPRNWVPDRPGIDHNVVLVGGGQT
                     GSALAFALRRSGIGKVSIIDAAEDDDHAGIWLTAARMNLLRTPKNLPGPELGIPAFAF
                     QSWYEARHGQDAYAAIDRIPRLDWVAYLNWYRRFLNIDVRYRTHLVRIEPADGFFRLH
                     MEIDGQPTVETTRKIVLATGFTGNGGAYIPQVLADLPRALLSHTQDPIDFEALRGRTV
                     AVVGAAAAAFDAAGVALEHGAAAVHLFARRPSIASLPITRVRGYPGAYDNYRQLPDAI
                     RWHQAIRFRRTGSTPTIDAIQRAVAFPHFHLHLNAPWQEAHADDGQVVALASDGTFRF
                     DHVIAGTGYFVDPSQRPEIAAFADRILLWKDQYVPPTDQADPFLGLHPYLGEGHEYLE
                     KSPGQAPYLRDIHVHNPAGFVSFGVPVGDVPSMRRDIPLVTARISRDLFLADLESHEQ
                     RMTGTIAPDFPDTVYTSAVWQPPGRT"
     gene            9792..9962
                     /locus_tag="VHX39_15825"
     CDS             9792..9962
                     /locus_tag="VHX39_15825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEX3992637.1"
                     /translation="MQIIYRTLTSLRSDARAVTALEYAMIASLIAVACVTIVTSLGTT
                     VSGVFSTVSSAL"
     gene            10514..10723
                     /locus_tag="VHX39_15830"
     CDS             10514..10723
                     /locus_tag="VHX39_15830"
                     /inference="COORDINATES: protein motif:HMM:NF021523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2252 family protein"
                     /protein_id="HEX3992638.1"
                     /translation="MQPSCSNKDRSDPLTQGPPICICGDCHIGNLGPVACAGGELAIE
                     IRDFDQTVTGHASNSRHYHDRNVPP"
     gene            11047..11751
                     /locus_tag="VHX39_15835"
     CDS             11047..11751
                     /locus_tag="VHX39_15835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3992639.1"
                     /translation="MSSARPILIVEDDDALRQVLADHIASSGVFESFEAASLDEASRH
                     LGAVDARFDSIILDVGLPDGDGRDFCARIRKQGHTMPIIMLTGAADEGDVVSGLNAGA
                     NDYIAKPFRANELLARLQAQLRLFDTSEDATFTIGRFTFRPAAKLLIGPDKKKRIRLT
                     AKEVDILKFLYRHANQTVSRQILLDQVWGYNAGVTTHTLETHVYRLRQKIESDPANCT
                     LLVTAAGGYRLDPTAL"
     gene            complement(11761..12615)
                     /locus_tag="VHX39_15840"
     CDS             complement(11761..12615)
                     /locus_tag="VHX39_15840"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3992640.1"
                     /translation="MAETQDNAAQIAYWNDRAAVTWTTFQERLDTLFEPLTALALDAA
                     APVPGERIIDIGCGCGATVLALAGRVGPTGQVLGLDISEPMAARARERIGAAGLANAR
                     VVVSDAAAHAFPPDSADLLFSRFGVMFFADPIAAFANLHGAMRQGGRLLCAAWRPLVD
                     NPWFIVPQQAARALLPPQPPADPHAPGPFAFADRDRTLGIFRDAGWQDVTLTRQDVPM
                     RFAASGEIDQATDFATRVGALARMLAEVDPALHPRIRSAVADALAAYDSPAGIILSGS
                     IWLISARA"
     gene            12728..12964
                     /locus_tag="VHX39_15845"
     CDS             12728..12964
                     /locus_tag="VHX39_15845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2188 domain-containing protein"
                     /protein_id="HEX3992641.1"
                     /translation="MKLHYKVVQHDGGWAYQLNGVFSEPFRDKTAALAAARRVAAEQR
                     IPGDTTHIEFQDATGKWHVELSEGDDRPEADVES"
     gene            complement(12987..13292)
                     /locus_tag="VHX39_15850"
     CDS             complement(12987..13292)
                     /locus_tag="VHX39_15850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992642.1"
                     /translation="MTSDSPAHDFLLPRLSALVSEAVASGIARDVAVAVLIDLVTSPG
                     FDTAAPDPKADSAPNPQWDRGPDSVVLVNGVSPQGPRDPTSRDEADFVKPIPWFGPS"
     gene            complement(13326..14285)
                     /locus_tag="VHX39_15855"
     CDS             complement(13326..14285)
                     /locus_tag="VHX39_15855"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEX3992643.1"
                     /translation="MRNLPHLLLWTDSPGPYIDAIAKAGLSDRAIVDTLSRKEKPSEA
                     QRAATQVLLAGGAPAGLLPTMPNLKWAQSLTAGVEGWLALPDLPANLTLTCARGTHRE
                     SMPENILGALFHITKPYAAIVEDKKQSLWRHRVATPLNGKTLGILGLGAIGQEVARLA
                     TALGMRVIGTKRRPAPLPGLAEVLPADRTDDVLAASDFVLLLLPATPETDNFINTERL
                     GRMKSGAWLLNFGRGHLIKDDDLIAAVQAKTIAGAVLDVFRQEPLPKEHKFWTTEGIL
                     VLPHIGGPHPDRDSIVARLFVENLRRFLDGETLKEVVDRAAGY"
     gene            complement(14446..15135)
                     /locus_tag="VHX39_15860"
     CDS             complement(14446..15135)
                     /locus_tag="VHX39_15860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase C-terminal
                     domain-containing protein"
                     /protein_id="HEX3992644.1"
                     /translation="MIRFYYHPTPNPMKISLFLEEAGLPYELVPIDTRRGEQHAESFR
                     AINPNGKLPAIFDTDGDVRVFDSTAILIYLGEKTGKFMGSPTDRGELLSWLMFIGSGI
                     GPYSGQAVHFQRAAPEQMPYAINRYRREAERHYAVLDKHLAGRTFIVGESYTIADISG
                     WGWLDRASVVLGGADPLGAYPNLKRWFQAIDARPAVARARKVGTDHAFKQEMDDDAKR
                     AMFPSNYPTAA"
     gene            15442..15891
                     /gene="msrB"
                     /locus_tag="VHX39_15865"
     CDS             15442..15891
                     /gene="msrB"
                     /locus_tag="VHX39_15865"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEX3992645.1"
                     /translation="MTVYRKSDEAIATLTPEQYRVTQQSATEYPGTGALLHNKATGIY
                     VDIVSGEPLFASADKYESGCGWPSFTKPIEPANVAELKDRSLGMLRVEVRSKHADSHL
                     GHVFEDGPRDRGGLRYCINSASLRFVPRDAMEAEGYGAYLSQVEEVG"
     gene            15888..>16080
                     /locus_tag="VHX39_15870"
     CDS             15888..>16080
                     /locus_tag="VHX39_15870"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase"
                     /protein_id="HEX3992646.1"
                     /translation="MSTERAVLAGGCFWGMQDLIRKQAGVVSTRVGYSGGEVRNATYR
                     NHGNHAEAIEIIFDPARTSF"
BASE COUNT         3052 a         5552 c         4720 g         2756 t
ORIGIN      
        1 cgcgctgccg ccaaacgctc gtttgacctg gtacggcccc gacatgggcg cccgcatgtt
       61 cgccaccgca cgccagatgg agacatgggc gcacggccag gcgatctacg acctgatggg
      121 cgcgaaacga cagtcgacgg accggctgcg caatatcgcc gaaatcggcg tccgcaccta
      181 cggctggacc ttcgccaatc gtgaccaacc tgttcccgga cccgcacccc acgtgcgcct
      241 tgccggtcca tcgggcgtgt cctgggagtg gaacgatcgg tcacccgaca acagcatcga
      301 cggcgacgcg ctggatttct gccaggtcgt cacccagacc cggaacgtcg ccgacacgcg
      361 cctgcaagtc accggtgaac cggcccgcct ctggatgagc ctcgcccagt gcttcgccgg
      421 cccacccgaa aacccgccgc ccccgggaac gcgtgccgca gccgcgccgc gctaaccgcc
      481 acccaccgcc atgcggcgtg gcgccatcgc ggtcacccgg tcaagtccaa gatgatcacg
      541 taacgtacgc ccctggtaat cgacccggta caggccgcgc cgttgcagga tcggcaccac
      601 cagatcgacg aaatccgtaa acgcagccgg gaaatacggc ggcaggatat tgaagccatc
      661 cgccgccctt tcgataaacc attcctccag cgaatcggcg atactctccg gcgtgccgca
      721 cagcacccaa tggccccgcg ccgccgccgt caggttataa agatcgcgca gcgtcatgtt
      781 ctcccgtcgc gccgtttcat acagcacgct ggaaaacgtc cggctgccct ggaacgatgg
      841 cggaggcggc accggcccgt ccagcggatg ccccgagacg tcatagccga tccggctggc
      901 caccaacgtc gccgcattgg tcggcgtcag ccagccctgc aacgtcgcaa gcctctcacg
      961 agcctcctca tgcgtggcgc cgatgatcgg catcaccccc ggcagcaccg ccaactcatc
     1021 cggcgatcgc ccgtattgcg ccatgcgtcc cttcagatcg gcataagcgc gcttggccgc
     1081 ctccaggtcc tgcaccaccg agaacaccac gtccgccgta cgcgccgcca gcgccaagcc
     1141 ggagggcgaa ccgcccgcct ggatgataac cggatgcccc tgcgggctac gcgcgatgtt
     1201 caccggtccc ctgacctgga agaaccgccc cttgtggtcc aacgtccgga ccttgccttc
     1261 atcgatgaac tgccccgtgg ccttgtcggc gacgatcgcg ccatcatccc agcagtccca
     1321 aagacccctg acgacatcga cgaattcgtt cgcccgctgg tagcgcaact cgtgctccag
     1381 atgctcctcg cggttgaagt tcagcgccgc cttcgggttg gaactggtca ccacgttcca
     1441 cgccgcccgc ccaccactca gatggtcgat cgaactgaac agacgcgcga cattgaacgg
     1501 ttcggtaaaa ctcgtcgaaa ccgtcgcccc cagcccaata tgcgtcgtca aggcgctgag
     1561 caccgagatc agcgaagtcg gctcgaagcg gcacatgaag gatggatgat cggtcgggtc
     1621 catcgccatc gcgtcggaga tgaacagcag gtcgaacttg ccacgttcgg cgatcgcggc
     1681 aatttcctgg atgaccggaa ggtccaggtg actggcggcg gcgccctcat agcgccagcc
     1741 ggcggtatgg ttgccggtcc ccagcacgaa aacgcccata tgcatctgtc ggttggtcgc
     1801 gcgcatcgat cgatgtcccc cgcttctccg attgacgccc agcctatccc cgcccactcc
     1861 tccccgatac ccccgaaaat ccctacccct ttttgcgcag cggccgcagc aaccgggacc
     1921 cgccctccag gaacccggtg gccaggcaga acgcatgcag cgccggttcc tccggcgcgg
     1981 ccagcagctc cagcgcgccg cagccggcaa cccgagccgc ctgtgccgcc gccttgacca
     2041 gcagccggcc gatcccccga cgccgatcgt ccggcgcgac caacagcatg gtgatctgcg
     2101 ccgtcggctg caccgcatcc agtgtccgat accaatgcag cagcaccacc ccggagggag
     2161 gcccccattc cgccgcgatc agcgccgcac ccggtgcatc ccgcatcgct tccagccgct
     2221 ccgccatcac ccgaggcgcg atgacaggcc cggccgtctg cagcaattcg cacaaccccg
     2281 ccgcatcagc gccgccggcc actcggattt ccagcccgta acggcttttc aacctccgtc
     2341 tccatcgctt cacgcctgct tgtcatcgag gaccggccgg ccaatgatgc cgtcccaaag
     2401 ggagggcggc aacaccatgc gaattggctt tgttggcacc ggcaccatgg gaaaccccat
     2461 cgcgagctgc ctgatccgcg ccggccattc cctgacggtt cacgaccgca acccggacgc
     2521 caccgccgcc ctgtgcgccc aaggcgccgt ccaggtcgaa accgccttcg ccgtggcacg
     2581 cgaaagtgaa gtggtgttca cctcgctgcc cggccccgcg gaattcgagg ccgcgatgct
     2641 gcaggcacag accggcatcc tggccggtct gcggccgaac accgcccata tcgacctgac
     2701 caccaacgcg cccaaaaccg tcgcccgtgt cgccgaggcc tgccgacagc gcggtgtcga
     2761 gttgatcgat gcgccggtca gcggccgtcc gccggcgatg accgtgatgg tcggcgccag
     2821 cgacgccgcc ttcgcccgat accaaccgtt gttccaggcc atcgccgcca acgtcttcca
     2881 cgtcggcccc agcggcgccg gagcaaccgc caagctggtg acccaatacc tcggctacac
     2941 caacttcatc gcctccatcg aaggcatgct ggttgccgcc aaagccggca tcggcctcga
     3001 caccctcgcc cgcatcgtcc ccgtcagcgc cggccaaagc cgcaccttcg acaacatccc
     3061 ccgaagcgtg ttgccgggca ctttcaccgc cgggggcacg ctcgatatcg tcgccaagga
     3121 catcgaactc gcctgccagc tcgcccgcga cgtcggcgcc ccagcttcat tgggcaccct
     3181 cgccgccgat ttctacaaac gcgcccaggc cctcggctgg ggccaggaag gcttcaccgt
     3241 cgtcgcccgc gtcctcgaag ccatggccgg tgccgaattg cgtaccccgc aaccgggagc
     3301 cagccaatga ccgacgatcg cgtcgccgga ctgctgctga cccaggagat cgccaatttc
     3361 ctgtacacgg aggccgaact tctcgatgag cgccggcacg acgaatggct ggccctgctg
     3421 gctgacgaca tccgttactg gatgccgatg cggcgcaacg tcaaatacgg cgacaccacc
     3481 cgcgagttca cccgtgaggc cgaagacatc aactggttcg acgaaggcaa ggagaccctg
     3541 gttcgccgtg tccgccagat ccagaccggc atccactggg cggaagaacc gcagtcgcgc
     3601 atcacccaca tgatatcgaa tgtgcaactg cttcacgtga cgcccgacgc tgccacggcg
     3661 cgggaagtca ccgccaaaag ccgcttcctg atctatcgca accgtgtcga aacggagacc
     3721 gacctgctcg tcggcaagcg cgaggacacg ttgcgccgcg ccggcgacag ttggttgatc
     3781 gcccggcgga agatcatcct cgaccagaat gtgctgatga cgaagaacct gacgtttttc
     3841 ttttagctca accgcgcgcc ttcgacgatc acgcgtgaaa cgggggaata gcgatgccaa
     3901 tgaacgcaac gcgaggctat cattccggtc tcgtcgatct gacctcgggg cagatcagtc
     3961 gggagatatt cgtcaacgac gacatctatg cgcaggagca ggagcgcgtc ttcgcccgtt
     4021 cctggctgtt cgtcggtcac gaaagccaga tccccaaccc cggcgatttt ttcgtttcgc
     4081 gcatgggtga agagtcggtt atcctctgcc gcgatcgcac cggcgccgtg cgtgtctttc
     4141 tcaattcctg tcgccatcgc gggatgaagg tgtgccgcta cgacgacggc aacgccgcgg
     4201 ttttcacctg tccctatcac ggctggagct acggcacaga cggcggcctt gtcggcgtgc
     4261 cgtttttccg cgaagcctat cattccgaac tcgacaagac gaaatggggc ctcgtcccgg
     4321 tcgcgcaact ctgctgctac aaggggacgg tatgggccaa ctgggacgcc tcggccccgc
     4381 catttcttga acatctcggc gaattccggc gctttctcga tctgatcctg gacggctggg
     4441 atggcaggga agggcaggcg gaactgatcg gcggcgtgca gaaatggatc atcccctgca
     4501 actggaaatt ccccgcggag aatttcagcg gcgacaccta ccacaacatc tcccaccgtt
     4561 cggttgacct tgtcggtgcc ggcccaagcg gccgcagccg tcgtgactac agtgagctga
     4621 acgtggcccg taaactgcac gttgcactcc ccgaccgtgg gcatcagacc atcacctacg
     4681 tgctgccgaa agatcatcag tcgcagcccg cctatcagaa ctcacccgag gtagccgagt
     4741 attttcgtca ttgcgaggag gagaggcggc gccgcccagg ccccaatacc cgactgatgg
     4801 gcgcgcccgg cgagatcttt cccaacgtcg cactgctgcc ccgccagcca cgcacgctgg
     4861 cggtgtggca cccgaaaagc gcccacgaaa ccgaggtctg gcgcttcttc ttcgtcgacc
     4921 gcgacgcccc ccaacaggtc aagaacttcc tgcgcgatta ctatatccgt tactccggcc
     4981 ccgccggcat gacggaacag gacgacatgg aaaactggaa ctacgcccac gccgccagcc
     5041 gaggcgtcat cgctcggcgt cacccctaca cctacgaaat gggcatgggc catgccgtgg
     5101 aaaactatga atgggatggg ctggaaatgc cgggccgggt gatcgacctg accaaggcgc
     5161 aggccagcga ggaaccaatg cgcaacctat atcaccgctg ggcccagttc atggaagccg
     5221 acagttggga ccaattgatg ccatggcggc acgaagccgc ggcacgagcg gcccaatgag
     5281 cgacccgatc aacgtccgcg ctctcgccgt cggcacccgc gtcatgctgg gcagcggcgc
     5341 cgaggtcgaa atcgttgcca atcccgaaga tggcgtctgg ctgttcgccc gttacctgtc
     5401 atccgccgac gatcccgcgt tggtcggcca ggaagacatg atctttgccc aggacgtcgt
     5461 cgagatccgc ccatagcccc aacattttga gatcgccctc ccttgcggtt aatctggcgg
     5521 caaccccaac ggaggaaaca acgatggtcg ccgaagccaa aggcccatac cgaggcacca
     5581 cccgccccga cgacgtcgca ctgaacgcct ggctggcgaa gcgccccgcc gaggcggcgc
     5641 tggaacccga tctgccgatc atcgatccgc atcaccattt ctgggaccag gcgcaccgcg
     5701 gccactatct gctgccgcaa ctgctgtcgg acatcggcgg cggccacaac atcgtctcca
     5761 ccgtctttct cgaatgtaga gcgatgtatc gcaaagacgg cccgcgtgag atggccgcgc
     5821 tgggagaggt cgaattcgtc aatggcatcg cggcgatgag cgcatcaggc ggctacggcc
     5881 cgtgccgcgt cgccgagggc atcatcggcg gtggcgacct gaccttcggc gccgccaagg
     5941 tgcgggcgct gctggaagcc gagatcgccg cggccggcgg acgtctgcgc ggcctgcgcc
     6001 acggcgtggc ctgggacaac cacaaagccg ttgccgattt cgcatcccgc accgtgcccc
     6061 tgcacctggt catcgacaag acattccgcg aaggtttcgc tcaactcgcc ccgctcggtc
     6121 ttagtttcga atcgtggcag tatcatccgc aactacccga tgcgatcgat ctcgcccgtt
     6181 ccttccccga caccaccatc atcctcaacc atgtgggcgg catcctcggt gtcgggcctt
     6241 atgccggcca tcgacaggac gtcctggccg gctggcgcaa ggacatccgg gagatggcca
     6301 ggtgcccgaa cgtctactgc aagctgggcg gtctcggcat gatatccgtc ggcttcgact
     6361 tccatgaacg tgacattccg ccctcctccg aggacctggc ggcggcatgg cggcaatata
     6421 tcgaaccctg catcgaagcc ttcggcgtcg aacgctgcat gttcgaaagc aacttcccgc
     6481 cggataagca atcctgcagc tacacttccc tgtggaacgc gttcaagcgc atcaccgcca
     6541 gcgcctcggc caccgagaag accgcgctgt acagcggcac cgccgcgaaa gtctaccggc
     6601 tgactgcccc ctgatcagtc gaaaggatca ccccacatgg acatctccgg gaagaccgcc
     6661 atcgtcaccg gcgccgcctc cggcatcggc ctcggtatcg ccaccgcgct cgccgaagcc
     6721 ggcgccaacg tcgtcatggc cgatatccag aaggacgcgg tggagaccgc cgcccatgcc
     6781 ctctccggca ccaacaagcg cgtcatgccg gtgcggatcg acgtgaccca ggaacaatcc
     6841 gtcatcgatg cgctggcgga ggccgaacgt aatttcggca aacttcatat cgcctgcaac
     6901 aacgccggcg tgccgacgca cggcaccagc ctggtcgatg tgccagtccg tgactgggaa
     6961 ttcgtgatcg gagtaaacat ctggggcatc atccacggca tccgccattt cgtccccgcc
     7021 atcctgaagc acggggagga gggacatgtc gtcaacaccg cctcggtcgc cgggttccag
     7081 aaccgccgcg ggacccacca aggcccctat tccatgagta aatacgccgc cgtgtcgctg
     7141 tctgaggaac tggagaatga gttggaaggc accaaggtcg gcgtctccgt cctgtgcccc
     7201 ggcccgatca acacgaacat cgcgcgcggt gcccgcaacc gtccggacca tttgggcgga
     7261 gcccagaccc gcgccagtga ggaagccgtg ctcgccgaac gcctcgcaac caccggtctg
     7321 gacccgagga tcgtcggcga ccgcgtggtg gacgcgatca tgaccggaac attctacgcg
     7381 tttgtcagtg ccgtgcccgc cgacgtaatc aaagcgcgcc accgtcgcat cgaagccgcg
     7441 ctgaacagca gatgggtgac ccactactaa ccgcacgcga ggtcagatca cgaaattcag
     7501 cgggtcggtg actggcttgc gcagtcccgc cttggccgcc cgtttcaaca ggtcctgaat
     7561 ggtcagtgat tcggtcagcg ccacaagagc cgcatcgaac tcgccccata acggttcgat
     7621 caccgcgcgc tgcagccgtc cgctcaggtc gtgggcactc tcttccaggc tgttcaatcc
     7681 aatggtgata acgtcggaga ctttgagcag cctggctggg cggccaagcc gatatccacc
     7741 atgcgggccg cgcgtgctct ccagcagacg ctcccgcgac agcgcctgca gcaaaggttc
     7801 cagcgtacgg cgggccatcc cggtgcgttc ggccagttcg gcggcgttca cgaccgtctc
     7861 cccgctactg tggaaggcga cgtccaaaac gatggcaagg gcaaccattc cacggtcacg
     7921 acgcgtaaga atcacagctc attctcgttt ccagttcgtt tgccacgatt aacccgatag
     7981 cgcgcttggg agcaagcctg ccctgtctaa cgctggaatc ggagattttc cttctgtcgt
     8041 gtaccccaga ccagaaatac cttctaaact gcgcatttac acgctgtatc cacgtataaa
     8101 atgcattaac ctgccccgac cgagtgggac ttgcggcatt tccaaccggc aaggtggact
     8161 cccacccgat atcccatatc gtgcgacggc acctcgacag gtacggatcg aatgacccag
     8221 tcctcagacc ccgatttcgc cgccgcctcg gcgcttcgcc tgatcgggcc cgatcctcgc
     8281 aattgggttc ctgatcggcc gggcatcgac cataacgtcg tcctcgttgg cggcggccaa
     8341 accggttcgg cgctggcctt cgcgctacgc cgaagcggca tcggcaaggt ctcgatcatc
     8401 gatgccgccg aggacgacga tcatgccggt atctggctga ccgccgcccg catgaacctg
     8461 ttgcgcacac cgaaaaatct gcccggcccc gagcttggca ttcccgcatt tgctttccag
     8521 tcctggtatg aagctcgtca cggccaggac gcctatgccg cgatcgaccg catcccgcgc
     8581 ctggactggg tcgcctacct caattggtac cgccggtttc tgaacatcga tgtgcgctat
     8641 cgcacccact tggtcagaat agaaccggcg gacggcttct tccgtctaca catggagata
     8701 gacggccagc caaccgtcga aacgacgcga aaaatcgtcc tggccacagg cttcaccggc
     8761 aatggcggtg cctatatccc gcaagttctg gcggacctgc cgcgagcatt gctgtcgcac
     8821 acccaggatc ccatcgattt cgaggccctg cgtggccgca ctgtcgcggt agtcggtgcc
     8881 gccgccgccg cgttcgatgc cgccggcgtg gcactggaac atggcgccgc cgccgtgcat
     8941 ctgttcgcgc gccgcccttc gatcgcttcg ttgcccatca cccgcgtgcg cggctacccg
     9001 ggggcctacg acaattatcg ccaactgccc gatgccatcc gctggcacca ggcgatccgg
     9061 tttcgccgaa ctgggtcgac gccgaccatc gacgcaatcc agcgagcggt cgcctttccg
     9121 cattttcacc tgcatctcaa cgcaccctgg caggaagccc acgccgatga tggccaggtt
     9181 gttgccctgg caagcgacgg aacattccgg tttgaccatg tgatcgccgg aaccggctac
     9241 ttcgtcgacc catcccaacg gcctgaaatt gccgccttcg ccgacaggat attactttgg
     9301 aaagaccagt acgttccacc caccgatcag gcggatcctt tcctcggcct gcatccctat
     9361 ctgggggaag gtcatgaata tctcgagaaa tcccctggcc aagcgccgta tctgcgcgat
     9421 atccacgtcc ataatccggc cgggttcgtt agtttcggcg tgccggtcgg cgacgttccc
     9481 agcatgcggc gcgacatccc gctggtcacc gctcgtatca gccgagacct tttcctggcc
     9541 gatctggaaa gccatgaaca gcgtatgacc ggcacgattg cgccggattt ccctgacacg
     9601 gtctatacgt ctgcagtatg gcaaccgccc ggccggacct gaagacagca cccgcccgga
     9661 cgcacgaaaa tagtttccct tttgaaagcg atatgtaacc attttccgcc tctaatcccc
     9721 tggtcttgct acaccctcat cgccggccgc caccgcggat caggcaacag acaggaaatg
     9781 gagtcgcctt catgcagatc atttatcgga cgctgaccag cctgcgttcg gacgctcgcg
     9841 ccgtgaccgc gcttgaatac gcgatgatcg ccagcctgat cgccgtcgcc tgcgtcacga
     9901 tcgttacaag tctgggcacg accgtcagcg gcgtgttcag cactgtcagc agcgcactgt
     9961 aatagccgga ccgcagttcc aaaccccttg ggcggcacat gcacgcgctc catactggat
    10021 cgcgcgcgcg tgccgttggc attacgtcgg cgcgagtgca gcgatccgtt cgcaggtcac
    10081 ggcggaatgc accgaattgg cgacaaagca atagacacgc gtcttggtgc ggtcgctatg
    10141 tcgccacctg gctggatggc gatcctcggg cgtagcgcgg catccacgaa tcgtcccgcg
    10201 cctttcggat cttccaccat ggtcgcctcg gcctcgtcac gatagctgac gaccgagatg
    10261 taggccccgg cacacaaacc caagacacca tagcttgagg caggctgaga gcgacgccag
    10321 cagcatgtcc tcggggttcc accgcgccgc gtcgccacgg ttaccggtcc tctcgaccgt
    10381 gacgccgtac atgccgcctg ctggccatgc atgatcctcc atcgttcgat caacccggaa
    10441 gtgaaccgtc gccgcccgcc tcgtcacaaa ccggtcaaca gtcgttgtcc cgaacggcca
    10501 cggcgccaca tcattgcaac cgtcatgcag caacaaggat agatcggacc cgctgaccca
    10561 gggcccgccg atctgtattt gtggcgattg tcatatcggc aacctcgggc cggtggcttg
    10621 cgccggtggc gaactcgcga tcgagatacg cgacttcgac cagaccgtga ctggtcatgc
    10681 aagcaattct cgccattatc acgacaggaa cgttccgcca taagtacctt gtttcaacgc
    10741 gacgatgtgc cgctacgttt ctcacatttg tcgtcggccg cggccacgcg cgccagttgg
    10801 atgatgcagg cacgaacgtt gggtgaagac cctgcatgca cctgattgcg ccgcgtgacg
    10861 cggcctaact ggcactatgc tcaggtaaat gaaacgtgat gacctcacat ttcctttact
    10921 tggacctcac ggttccggga tcccccagca acgcggttgg cggtggcgat cacggaaagt
    10981 ttctttgcgg ttcaaggcct aatgcgatat tgagacgata tcggtattat cggaagggag
    11041 agaaacatgt cgtctgcgag accaattctg atcgttgagg atgacgacgc cctccggcag
    11101 gttctggccg atcacatcgc ctccagcggg gtcttcgagt cgttcgaggc ggcgtccctg
    11161 gacgaggcca gtcgccacct tggcgcagtg gatgcacggt ttgattcgat catcctcgat
    11221 gtcggcctgc ccgacggtga cggccgcgat ttctgcgccc gtatccgtaa gcaaggccac
    11281 accatgccca tcatcatgct gaccggcgcc gccgatgaag gcgatgtggt cagcggcctg
    11341 aacgccggcg cgaacgacta tatcgccaag ccatttcgcg cgaatgagct gctggctcgg
    11401 ctgcaggccc agcttcggct gttcgacacc agtgaagatg cgacctttac catcggccgc
    11461 ttcaccttcc gtcccgcggc gaagctgctg atcggtcccg acaagaaaaa gcgcattcgt
    11521 ctgacggcaa aggaagtcga tatcctcaaa ttcctttacc ggcatgccaa tcagacggtc
    11581 tcacggcaaa tcttgctgga ccaggtctgg ggctataacg ccggcgtgac gacccacacg
    11641 ctggaaacgc atgtctaccg gctgcggcag aagatcgaga gcgatccagc caattgcacc
    11701 ctgctggtca ccgctgccgg cggctaccgg ctggacccca ccgcactctg acgggtatcg
    11761 ttacgcccgc gccgagatca gccagatcga gcccgacagg atgatgccgg ccgggctgtc
    11821 gtaggccgcc agggcgtcgg cgacggccga tcggatgcgc gggtgcaacg cggggtcgac
    11881 ctcggccagc atccgcgcca gggcgccgac acgggtcgcg aagtcggtgg cctggtcgat
    11941 ctcaccggac gcggcgaagc gcatggggac gtcctgccgt gtcagcgtca catcctgcca
    12001 gccggcatcc ctgaaaatcc ccagcgtgcg gtcccgatcg gcgaacgcga acggcccagg
    12061 ggcatgcggg tcggctggcg gttgtggcgg caacagcgca cgggcagcct gctgcggcac
    12121 gatgaaccac ggattgtcca ccagcgggcg ccaggcggcg cacagcagcc ggccgccttg
    12181 ccgcatcgcg ccgtgcagat tggcgaacgc ggcgatcgga tcggcgaaga acatgacgcc
    12241 gaagcgggaa aacagcagat cggcgctgtc cggcggaaac gcgtgcgcgg cggcgtccga
    12301 caccaccacc cttgcgttgg ccaggcccgc ggcgccaatg cgttcgcgcg cccgagccgc
    12361 catgggttcc gagatatcca agcccagcac ctggccggtt ggcccgacgc gaccggccag
    12421 cgccagcacc gtcgcgccac agccgcagcc gatatcgatg atccgctcac caggtaccgg
    12481 cgccgcggca tccagcgcca gggcggtcaa aggctcgaac agcgtatcca gacgctcctg
    12541 gaaggtggtc catgtcaccg ccgcccgatc gttccaatag gcgatctgcg ccgcgttgtc
    12601 ctgtgtttcg gccatgtcag cctcccggtt gcgccacgat catgccatgg acatccgtgc
    12661 acgtcgcgta tggcgcatct ggccccaagt ccctatctgt caatctgatc gcgaaaaggg
    12721 aatagccatg aaactccact acaaggtcgt ccagcacgac ggtggctggg cctatcagtt
    12781 gaatggtgtg ttctcggagc cgtttcgcga caagaccgcc gctctggccg ccgcaaggcg
    12841 tgtggcggcg gagcagcgca tacccggcga caccacgcac atcgaatttc aggacgcgac
    12901 cggcaaatgg cacgttgaat tgtcggaggg cgacgaccgg ccggaagccg acgtcgagtc
    12961 ctgataacgt cgcgatcggc gcgtcttcat gacgggccaa accaaggaat gggcttgacg
    13021 aaatcggcct catcccggga ggtaggatct cgcggcccct gggggctgac gccgttcacc
    13081 agcaccacgc tgtcggggcc gcggtcccat tgcggatttg gcgccgaatc agccttcggg
    13141 tcgggcgcgg cggtgtcgaa gccgggcgac gtaaccaggt cgatcagcac cgccaccgcg
    13201 acatcccggg cgataccgct tgcgacggct tcgctaacca gcgcggacag gcgcggcagc
    13261 agaaaatcgt gggcgggtga atcgctggtc attccggcct tcctttcgat gcgccgcgac
    13321 cgggttcagt aaccggccgc cctgtccacg acctctttca gcgtctcgcc gtccaggaag
    13381 cggcgcaggt tctcgacgaa cagtctggcc acgatgctgt cgcggtccgg atgcggcccg
    13441 ccgatatgcg gcagcacaag gataccctcg gttgtccaga acttgtgctc tttcggcaac
    13501 ggttcctggc ggaacacatc cagcaccgcg ccggcgatcg tcttcgcctg caccgctgcg
    13561 atcaggtcgt cgtccttgat caggtggccc cggccaaaat tcagcagcca tgcgccggat
    13621 ttcatccgcc ccagccgctc ggtattgatg aaattatcgg tttccggcgt ggccggcagc
    13681 agcagcagca cgaaatccga cgccgccagc acgtcatcgg ttcggtcggc tggcagcacc
    13741 tcggccaggc cgggcaacgg ggcagggcgg cgcttggtgc cgatcacccg catgcccagg
    13801 gcggtggcaa gccgagccac ctcctgcccg atcgcgccca gcccgaggat acccagcgtc
    13861 ttgccgttca gcggcgtcgc cacccggtgg cgccacaggc tttgcttctt atcctcgacg
    13921 atcgcggcat acggcttggt gatatgaaac agcgcgccca ggatgttttc cggcatcgac
    13981 tcgcgatggg tgccgcgggc gcaggtcagc gtcaggttgg ccggcaggtc gggcagcgcc
    14041 agccagccct cgacgcccgc ggttagcgat tgcgcccatt tcaggttcgg catggtcggc
    14101 agcaaccccg ccggagcacc accggccagc aagacctgcg tcgccgcgcg ctgcgcttcg
    14161 gacggctttt ccttgcggct cagcgtgtcg acgatcgccc ggtcggacag ccccgccttg
    14221 gcgatggcgt cgatataggg tccgggtgaa tcggtccaca gcagcagatg gggcaggttg
    14281 cgcatggtcg ggctcctgaa aatgttggag ccagcctaga gtgtgatcgc ctgaggccat
    14341 agaccggaag gcgtgaatca cgcgaaaaac atgcacccac gagacgaaag ggccatcgct
    14401 cggacggcgg gatgcgcaac gaccgcgcac accccgccga accgctcagg ccgccgtagg
    14461 atagttcgac ggaaacatcg ccctcttcgc gtcgtcgtcc atctcctgct tgaaggcatg
    14521 atcggtgccg accttgcggg cacgggcgac ggcagggcgt gcatcgatcg cctggaacca
    14581 gcgtttcagg ttcgggtacg cgcccaacgg gtcggccccg cccagcacca cggatgcacg
    14641 atccagccag ccccaccccg agatatcggc gatcgtgtag ctttcgccca cgatgaacgt
    14701 ccggcccgcc agatgcttgt ccaacacggc atagtgacgc tccgcctcgc ggcgatagcg
    14761 gttgatcgcg tagggcatct gctccggcgc ggcgcgctgg aaatgcaccg cctggccgga
    14821 atacgggccg atgccagacc cgatgaacat cagccaagac agcaattcgc cccgatccgt
    14881 cggcgaaccc atgaacttgc cggttttctc gcccaggtag atcaggatgg cggtcgaatc
    14941 gaacaccctg acatcgccat cggtgtcgaa gatcgccggc agcttgccgt tggggttgat
    15001 ggcgcgaaac gactcggcat gttgttcgcc gcgtctggta tcgatcggca ccagttcata
    15061 gggaagcccg gcttcctcca ggaacagcga gattttcatc gggttcggtg tcgggtgata
    15121 gtaaaagcgg atcattgtcg gttccttcct cgaatctgaa tccttgccgg acccacggtg
    15181 ccggagaatg ctgccggggc gtataggaat catccaccca gcgtatgggt gcgacgctac
    15241 tcctccgtca accagaccgg ccaatgtgac ggcttcgcgg gaccgacctc gattattgcc
    15301 cgatcaagca gacgaacacc taccccggcg gataccggca acagcgcggc ttctcattgt
    15361 ttgccggcat ctgatacaat cccggccgct ggacatggca ccgaacgatc accaccttgg
    15421 cggagaaagg gacatcctga catgaccgtc tatcgcaaaa gcgacgaagc catcgccacg
    15481 ctgacaccgg agcagtaccg ggtcacccag caaagcgcca ccgaatatcc cgggaccggc
    15541 gcattgctgc acaacaaggc cacgggcatc tacgtcgaca tcgtctccgg tgagccgctg
    15601 ttcgcgagtg ccgacaagta cgagtccggc tgcggctggc ccagtttcac caagccgatc
    15661 gaaccggcca acgtcgccga actcaaggac cgttcgctcg gcatgctgcg cgtcgaggtc
    15721 cgttcgaaac acgccgacag ccatctcggc catgtgtttg aggacggccc gcgcgaccgc
    15781 ggcggcttgc gctactgcat caactccgct tcgctccgtt tcgtccctcg cgatgccatg
    15841 gaagccgagg gctacggagc ttatctctca caagtggagg aagtcggatg agcacggaac
    15901 gcgcggttct cgccggcggc tgtttctggg gcatgcagga cctgatccgc aagcaggcgg
    15961 gcgtcgtctc gacccgcgtc ggctactccg ggggcgaggt gcgcaacgcc acctatcgca
    16021 accacggcaa ccacgccgag gcaatcgaga tcatcttcga tccggcccgc accagcttcc
//
LOCUS       DATAVD010000828         3302 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1753648, whole genome shotgun sequence.
ACCESSION   DATAVD010000828 DATAVD010000000
VERSION     DATAVD010000828.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3302
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1753648"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..872)
                     /locus_tag="VHX39_15875"
     CDS             complement(<1..872)
                     /locus_tag="VHX39_15875"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3992647.1"
                     /translation="MPDVTTEAAGDDRATELDALVIGAGFAGLYQLLCLRDRLGLSVK
                     ALEAGGGVGGTWYWNRYPGARCDSESHVYWYTFSPDLMREWEWSERYPGQPEIMRYLN
                     YVADRFDLKRDIQFDTRVVAAQYDQATNRWRVRTEAGETFVAKFLITAVGCLSTANVP
                     KFEGLESFAGDWYHTGQWPHEGVDFTGKRVGMIGTGSTGIQAAPVIAASAEHLTVFQR
                     TANYSVPARNAKLTPEFQDYIKENAAGIRTVTRETLNGMGFRIEERLAVETPPEEREA
                     IYEAAWERGGLQFRA"
     gene            complement(951..1421)
                     /locus_tag="VHX39_15880"
     CDS             complement(951..1421)
                     /locus_tag="VHX39_15880"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3992648.1"
                     /translation="MIEVNGMAHVILTVSQWDKARAFYAELLPFLGMTKVYDGNNFLY
                     HVGGRTAIGIQRCAPEHENERFVQNRAGLHHLCLRARSRQDVDAAADKVRAIGGRIDR
                     GPVEGDFAPGYYFFVFEDPDGIRLEVNFVPGKGLLVSPDNPLIPSADPDWDQNP"
     gene            1728..2063
                     /locus_tag="VHX39_15885"
     CDS             1728..2063
                     /locus_tag="VHX39_15885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992649.1"
                     /translation="MPKHFEFAGYILDQHPRAFGPRGDLRERLGYRPGERICIATVGG
                     SGVGVHLMRRIAHRLDRYGAGRRMAFETSTPRSIADAIITTLRTPVRYQPVEADGAAK
                     AAGMIVELL"
     gene            2375..2983
                     /locus_tag="VHX39_15890"
     CDS             2375..2983
                     /locus_tag="VHX39_15890"
                     /inference="COORDINATES: protein motif:HMM:NF026183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HEX3992650.1"
                     /translation="MSTSRRSRRIAHAAIAARLKAANGMSWIDAPVSGEATGAADGTL
                     AVMAGGNPPDLDRVKPYVLTMSQRFTRMGAIGAGQGAKLCNQIIAACAMVVLSEATRF
                     AVDVGIDAARLPEALAGGFADSIPLQLFVPRMANELAEPAIGPVSIIIKDLDTIADVA
                     RTHATPLPMASLAAQMLRLLRSSCGPRADVLEVYKLGEPQSR"
     gene            complement(3136..>3302)
                     /locus_tag="VHX39_15895"
     CDS             complement(3136..>3302)
                     /locus_tag="VHX39_15895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009827252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HEX3992651.1"
                     /translation="SSRAEGCVDEIANAHMGKKQRMRWSPRGAHRVALVRAAVLDGRL
                     KPSEAIPMAA"
BASE COUNT          596 a         1097 c          993 g          616 t
ORIGIN      
        1 gcgcggaact gcaatccgcc acgctcccac gcggcttcgt aaatcgcttc gcgctcctcc
       61 ggcggggtct ccacggccag gcgttcctcg atccggaacc ccatgccgtt cagcgtctcc
      121 cgggtcaccg tcctaatccc ggcggcgttt tccttgatgt aatcctggaa ttccggcgtc
      181 aacttcgcgt tgcgtgccgg taccgagtag ttcgccgtgc gctgaaacac cgtcaggtgt
      241 tcggcggatg ctgcaatcac cggcgccgcc tggatgccgg tggaaccggt gccgatcatc
      301 ccgacccgct tgccggtgaa atcgacgcct tcgtgcggcc attgtccggt gtgataccag
      361 tcgccggcga agctctccag cccctcgaat ttcgggacat tcgcggtgga caggcaaccg
      421 acggcggtga tcaggaattt tgcgacaaac gtctctccgg cttcggtccg gacccgccag
      481 cggttggtgg cctgatcgta ttgcgcggcc acgacgcggg tatcgaactg aatgtcccgt
      541 ttcaggtcga aacggtccgc cacatagttg aggtaacgca tgatctccgg ctgaccgggg
      601 tagcgttccg accactccca ttcgcgcatc aggtctggtg agaaggtata ccagtaaaca
      661 tggctttcgg agtcgcagcg cgcgccgggg tagcggttcc agtaccaggt gccgccgacg
      721 ccaccgcccg cttccagcgc cttcaccgac aggcccagac ggtcgcgcag gcaaagaagc
      781 tggtagagcc ccgcgaagcc cgcgccgatc accagcgcgt cgagttcggt ggcgcgatcg
      841 tcgccggctg cttccgtcgt cacatctggc atcggtgtcg ctaccctcaa tctgtcatcg
      901 gctggaataa ggctccggaa caggccggat atcaagcccg gcgccgccgc ttacggattc
      961 tgatcccagt cgggatcggc gctcggaatc aatggattat ccggtgaaac caacagacct
     1021 ttacccggaa cgaaattcac ttccagccga atgccatcgg gatcttcaaa gacaaagaaa
     1081 tagtagccag gcgcgaagtc accttcgacg gggccgcgat cgatacggcc accgatcgcc
     1141 cgcaccttgt ccgccgccgc atcgacatcc tgacgcgagc gggctcgcag gcaaagatga
     1201 tgcaagcccg ctcggttctg gacgaaccgc tcgttctcat gctccggggc gcaacgctgt
     1261 atgccgatcg cggtgcgccc acccacgtga tacagaaaat tgttgccgtc atagaccttc
     1321 gtcatgccca gaaagggcag cagttcggca tagaacgcgc gcgccttgtc ccattggctg
     1381 acggtcagga tcacatgcgc catgccgttg acttcaatca tcgatcatcg accttccatc
     1441 atcgcttccc ccgcttcccg gcggtgccca tcgctgccgg gctcggcccg cggatcatct
     1501 ccaggagacg gcacgttcgc ggagcgggag acacaccatg ccggccgttc aaccgcaggt
     1561 ccagaagacg cgtgatctca tgccatgttt gccgccgcct cggcggagaa cggcgacatc
     1621 aggaaacgca ctcaaccggt cgctaaagtc tttcacgtag cttttgcgcg gacgggcaag
     1681 tatcgacaca ctcctttggc cacggcctgc ccgcgatgcg ggatcgggtg ccgaagcatt
     1741 tcgagttcgc cggctatatc ctcgatcagc atccgcgcgc cttcggcccc cgcggggacc
     1801 tgcgtgagcg gctcggctac agacccggtg agcgcatctg catcgccacc gtcggcggct
     1861 ccggcgtcgg cgtgcacctg atgcgccgca tcgcccaccg gctcgaccgc tatggcgccg
     1921 gacggcgcat ggcgttcgag acctccacgc cgaggtcgat cgctgacgcg ataatcacca
     1981 cgctgcgaac gccggtccga tatcagcccg tcgaggcaga cggagcggcg aaagccgccg
     2041 gaatgatcgt ggaacttctt tagaggatct cgcggaggaa caatggttga gtcattgcaa
     2101 caagctacac cgctcgggtt catcggcgtc ggcgcaatgg gtctgccgat ggtccgtcga
     2161 atgttggcgg ccggccattc cgtaaccgtc tgggatcacg tgccggagcg actcgccgcc
     2221 gccgaacgtg ccggagcaac cgccgccgac aatgtagctt ccctcgcgcg tgccgccgaa
     2281 atcgtgtttc tgtgcctaac cgacgcggtt gctgtcgaga cggttatatt cggcccaaaa
     2341 ggtctatcgt cggtcccagc cccccaaatc atcgttgtcg acttctcgtc gatcgcgccg
     2401 gatcgcacat gctgcgatcg cagcgagact gaaggcggcg aacggcatga gctggatcga
     2461 cgccccggtg tccggcgagg ccaccggcgc cgcagacggc actctcgcgg tgatggccgg
     2521 cggcaacccg cccgatctcg accgggtcaa gccctacgtg ctgacgatgt cacagcgttt
     2581 cacgcggatg ggtgccatcg gcgccggtca gggggcgaaa ctctgcaacc agatcattgc
     2641 agcttgcgcc atggtggttt tgtccgaggc gactcgtttt gcagtcgacg tcgggataga
     2701 cgccgcccgc ctcccagagg cgctcgccgg cggatttgcc gactcgattc ccttgcagct
     2761 cttcgtcccg cgaatggcca acgaattggc cgaacccgcg atcggccccg tctcgatcat
     2821 tatcaaagac ctcgacacga tcgctgacgt tgcccgcacc cacgcgaccc cgctgccgat
     2881 ggccagcctt gccgcccaga tgcttcggct gcttaggtca agctgcggtc cgagagcgga
     2941 cgtgctcgaa gtttacaaat tgggcgaacc gcagtcccgg taacgacgga ctgatcctgg
     3001 tgaggtggac gcccccgact gcatcaatgt gccaaagtcg aggtgtcgat aacaccacct
     3061 gagggagacg cccaaatcat tggtcccctc tgttggtgcg ggtgtccatc cgggagtggc
     3121 aaaaacctgg tctgactatg ccgccatcgg aatggcttcg gatggtttga gacgcccgtc
     3181 caggaccgcc gctctgacca gtgcgacgcg atgagcgccg cggggcgacc agcgcatgcg
     3241 ttgcttcttg cccatgtgcg cgttggcaat ctcgtcgacg catccttccg ccctggaact
     3301 cg
//
LOCUS       DATAVD010000829         3010 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_826301, whole genome shotgun sequence.
ACCESSION   DATAVD010000829 DATAVD010000000
VERSION     DATAVD010000829.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3010
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_826301"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            128..694
                     /gene="hslV"
                     /locus_tag="VHX39_15900"
     CDS             128..694
                     /gene="hslV"
                     /locus_tag="VHX39_15900"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010512855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEX3992652.1"
                     /translation="MQNISSAAADPTGWHGTTILCVRRDGHVTMAGDGQVSMGQTIVK
                     GNARKVRRIGNGGHVIAGFAGATADAFTLLERLESKLERFPNQLERACVELAKDWRTD
                     RYLRRLEAMMAVADKDRSFTLTGTGDVLEPDDGVIGIGSGGNYALAAARALLSVDGLS
                     AEEIARRAMKIAADICVYTNGNVIVESI"
     gene            694..2016
                     /gene="hslU"
                     /locus_tag="VHX39_15905"
     CDS             694..2016
                     /gene="hslU"
                     /locus_tag="VHX39_15905"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010506524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HEX3992653.1"
                     /translation="MEVPTYSPREIVSELDRFIVGQNDAKRAVAIALRNRWRRQHLPE
                     AMREEVVPKNILMIGPTGCGKTEIARRLAKLAQAPFLKVEATKFTEVGYVGRDVESIV
                     RDLVDASLNMLRETSRRDVRAKAEGNAEERLIEAMVGDNASADTKSKWRRRLRDGEFE
                     HNEIEIEVNDAGSSPIGQLDMPGMPPGQVINLSEMMKGLMGNRPKQKRRMTVEAARKI
                     LEAEEADQLLDNEQLTKDAVSHAENNGIVFIDEIDKICARTMEGGFRGGDVSREGVQR
                     DLLPLIEGTTVNTKYGLVKTDHVLFIASGAFHQAKPSDLLPELQGRLPIRVELQALSR
                     DDLRRILVEPEHSLVKQYAALLGTENVTLSFTDDAVDALSDLAADINERIENIGARRL
                     HTVLERLLEDISFTATDRAGETIAVNAAYVNEKVAPLAQKGDLSRFIL"
     gene            complement(2140..2517)
                     /locus_tag="VHX39_15910"
     CDS             complement(2140..2517)
                     /locus_tag="VHX39_15910"
                     /inference="COORDINATES: protein motif:HMM:TIGR04256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEX3992654.1"
                     /translation="MHADQLNELSRAVIGRAFVVLNSLGSGFLEKVYENALAHELRKA
                     GISVEQQHATTVMYDGVAVGKYFVDLMIEDCLLVEIKVTKALDDIHAAQCINYLKATG
                     LNLCLLLNFARPRLEMKRLANRL"
     gene            2740..>3010
                     /locus_tag="VHX39_15915"
     CDS             2740..>3010
                     /locus_tag="VHX39_15915"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3992655.1"
                     /translation="MADFDIIISGGTIVDGTRTPRFVSDIAIKDGKIAQIGGLKGKTA
                     ERVLDATGRIVAPGFVDLHTHYDAQIFWDPYCTLSGWHGVTSVALG"
BASE COUNT          621 a          871 c          934 g          584 t
ORIGIN      
        1 gcggcctcga cgaactggaa cgctacggct tcgacgacac gcccgagccg ccgccgaccg
       61 ccggctgaca ctctggccga acggctgggc ttgcggttcc gctgcccagc ctccatttgt
      121 cccgatcatg cagaacattt catccgccgc agccgacccg accgggtggc acggcaccac
      181 catcctgtgc gtcaggcggg atggacacgt caccatggcc ggcgacggcc aggtttccat
      241 gggtcagacc atcgtcaagg gcaatgcgcg caaggtccgc cgtatcggca acggcggcca
      301 cgtcattgcc ggattcgccg gcgccaccgc cgatgcgttt accttgctgg aacggctgga
      361 atccaaactc gagcgttttc ccaaccaact tgaacgcgcc tgtgtggagc tcgcaaaaga
      421 ttggcgcacc gaccgctacc tccgccggct cgaggcgatg atggcggtcg ccgacaagga
      481 ccgcagtttt acccttaccg gcaccggcga tgtcctggaa ccggacgacg gtgtgattgg
      541 catcggctcc ggcggcaact acgctctcgc ggcggcgcgc gctttgctgt cggtcgacgg
      601 gttgagcgcc gaggaaattg cccgtcgtgc gatgaagatt gcggcggaca tctgtgtgta
      661 taccaacggc aacgttatcg tggagtcgat ctgatggagg tgccgaccta ttccccccga
      721 gagattgtct cggaactgga ccgtttcatt gtcggtcaga atgacgccaa gcgcgcggtg
      781 gcaattgcac tgcgcaaccg ctggcgccgc cagcatttgc ccgaggcgat gcgcgaagaa
      841 gtggtgccga aaaacatcct gatgatcggc cctaccggct gcggcaagac cgagatcgcc
      901 cgccgtttgg cgaaactggc ccaggctccg tttctgaaag tggaagcgac gaaatttacc
      961 gaggttggct atgtcggacg cgacgtcgaa agcatcgtgc gtgaccttgt cgatgcgtcg
     1021 ttgaacatgc tgcgcgagac ctcgcgccgc gacgtacggg caaaggctga gggcaacgcc
     1081 gaggaacggc tgatcgaagc catggtcggc gacaacgcca gcgccgatac gaaatcgaaa
     1141 tggcggcgcc ggctgcgcga cggcgagttc gagcacaatg aaatcgagat cgaggtcaat
     1201 gatgcgggca gttcgccgat tggccaactc gacatgccgg gaatgccgcc cggccaggtg
     1261 atcaacctga gtgagatgat gaaaggcctg atgggcaacc ggccgaagca gaaacgccgc
     1321 atgacggttg aagcggcgcg aaagatcctc gaagccgagg aagccgatca gttgctggac
     1381 aacgagcagc tgaccaagga cgcggtctcg catgcggaga acaacggcat tgtgttcatc
     1441 gacgagatcg acaagatttg cgcgcgcacg atggagggcg ggttccgcgg cggtgacgtc
     1501 tcgcgggaag gcgtgcagcg cgacctgttg ccgttgatcg agggcaccac ggtcaacacc
     1561 aagtacggcc tggtgaagac agatcatgtg ctgttcatcg cctcgggtgc attccatcag
     1621 gcgaagccat cggatctgct gccggagttg caggggcggt tgccgatccg ggtcgagctg
     1681 caggcgttgt cgcgcgacga tctgcgacgg attctggtcg agccggagca ctcgctggtg
     1741 aagcaatacg cggcactgtt gggcaccgag aacgtgacgc tgagttttac tgacgatgcg
     1801 gtggacgcgc tgtcggatct ggcggcggat atcaacgagc ggatcgagaa tatcggcgcc
     1861 cgccggttgc atacggtact ggaacggttg ctcgaggata tatcatttac cgcaacggat
     1921 cgcgcaggcg agacgattgc ggtgaatgca gcttatgtga acgaaaaggt cgcaccgctg
     1981 gcgcagaagg gcgacctgag ccgattcatt ttgtgatctt gcgatcccgc cgtggcacgc
     2041 tttttcagag cgtcacggcg ggggctgttt tgggattgca ggccggtttt accgcagatt
     2101 gcagtggatg cacgcggatg cacgcagatt cagggtggtt tacaggcggt tggccaggcg
     2161 tttcatttcc aggcgcggtc tggcgaaatt aagtaacaaa cacagattca ggccggttgc
     2221 cttcagataa ttaatgcact gagcggcatg tatgtcgtcg agtgctttcg tcactttgat
     2281 ttcaaccaac aggcaatctt cgatcatcag atcgacgaaa tattttccga ccgcgacgcc
     2341 gtcgtacatg accgtcgtgg cgtgctgctg ttcgacggaa attccggctt tacgaagttc
     2401 atgtgccaga gcattctcgt aaaccttctc gagaaagcct gatccgaggc tattaagtac
     2461 cacaaaggcc cttccgatca cggccctcga cagttcgttc aactgatctg cgtgcatttg
     2521 cgttcatctg ttgtcatctg cggtaaaccc tttctttcca aaactcgcag caactgatta
     2581 ccaaaaggtt gacgcaccac ttcacgtcga tcgccaggcc gtggcgatcg ccgtttcggg
     2641 ttcccgacac ttgcctcgcc atcgcattga cccggtggaa tccgcgccct agcgtgctcc
     2701 caaggccacg gttcaatcat ccctaaggga gaggcaaaga tggcggactt cgacatcatc
     2761 atcagcggtg ggacgatcgt cgacgggacc cgaacgcccc gtttcgttag cgacattgcg
     2821 atcaaggacg gcaagatcgc tcaaatcggt ggtttaaaag gcaagactgc cgaacgtgtg
     2881 ctggacgcca ccgggcggat cgtcgcacca ggtttcgtcg acctgcatac gcactacgac
     2941 gcgcagatct tctgggaccc ctactgcacc ctgtccggct ggcacggcgt cacctccgtc
     3001 gcactgggca
//
LOCUS       DATAVD010000830         2211 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_81138, whole genome shotgun sequence.
ACCESSION   DATAVD010000830 DATAVD010000000
VERSION     DATAVD010000830.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2211
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81138"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1301
                     /locus_tag="VHX39_15920"
     CDS             <1..1301
                     /locus_tag="VHX39_15920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992656.1"
                     /translation="LTRIDTARREGFHRWPRFLPDGRHFLYSVRGAAAQPGIYAGSLD
                     GKTKKFLVRSDSNAFYASPGYLLYLDQDMLLAQPFDAGSLELKGSPFPVADRVGRSSF
                     GDGAVAVSQTGVLAYAGPILRTGHLTWFDRMGSEIGIAGAEGDYTDFRLSPDGTRLAA
                     SLVDARAGWPDIWLTDLTRGSTFRYTFGPFLAASPLWSPDGTRLVFRRTPRGVTEFFE
                     KSAAGAGNEQAVLTQDQERAAHVNSVTLVPTDWSPDGRNIIFAVPAIGSGFELWRLPM
                     DGTSTPIRFLQSTADLMHANFSPDGKLIAYSSNESGRFEVYVQTFPLTDRKWQVSTSG
                     GYEPRWRADGREIYYLSEGRKLMAAEVKPGSSFGVPKVLFQTRVPAGVNGLRTNYVPD
                     RDGRRFLVNTQSSDAPPEAITVTVNWLTGHGTTTNGPAAR"
     gene            1387..1818
                     /locus_tag="VHX39_15925"
     CDS             1387..1818
                     /locus_tag="VHX39_15925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992657.1"
                     /translation="MNLRLLIERKHGEQVMVKALRSLCLLGLLPGLAVTASGPSQIKG
                     VLMDKMCSSKAEERLLPTGIEGGMIVAEAHTRECALKPACQKSGYGVYTYDQKFLQFD
                     AAGNRKAVEAIKASKKLDDLEVEVTGTVAGDTIKVESLKLL"
     gene            complement(1824..>2211)
                     /locus_tag="VHX39_15930"
     CDS             complement(1824..>2211)
                     /locus_tag="VHX39_15930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3992658.1"
                     /translation="TPGMTRAAAITHATAGAKKIWAGTVVVQPNAKTGPHHHGDLETV
                     LYIVKGRARFRWGDHLEYVDEAGPGDFIFVPPWVPHQEINARADEPVEAVVVRSDQEP
                     IVVNLDIPSPESETNVADLFHPPRKS"
BASE COUNT          414 a          651 c          708 g          438 t
ORIGIN      
        1 cgttgacccg catcgacact gcgcgccggg agggcttcca ccgctggcca cgttttctgc
       61 cggatggccg ccactttctg tattccgtac gcggcgccgc ggcgcagcca ggcatttacg
      121 ccggttcgct cgatggcaag acgaagaagt tcctggtacg tagcgattcc aacgcctttt
      181 atgcgtcacc cggctacttg ctctacctcg accaggatat gctgctggcg caacccttcg
      241 acgcggggag tctcgaactc aaagggtctc cgttccctgt ggccgatcgg gtcgggcgtt
      301 cgtctttcgg agatggcgcc gtcgcggtct cacagacggg agtgcttgcc tacgccggtc
      361 ccatcctgcg caccggccat ctcacctggt tcgaccgcat gggctcggaa attggcatag
      421 cgggcgccga gggcgactac acggatttcc gcctctcacc cgatggcacg cggttggcag
      481 cctcgctggt ggatgccaga gcaggctggc ccgatatctg gctcaccgac ctgacgcgcg
      541 gaagcacctt ccgctataca ttcgggccgt ttttggcggc ttctccgctg tggtccccgg
      601 atggcacgcg cctcgtgttc cggcggacgc cccgcggggt gactgagttt tttgaaaaga
      661 gcgcggccgg ggccggcaat gagcaggcgg tgctgactca ggatcaggaa cgcgccgcgc
      721 acgtgaactc ggtcacgctg gttccgacag attggtcgcc cgacggacgc aacatcatct
      781 tcgcggtgcc ggctatcggc tctggatttg agctctggcg acttcccatg gatgggacgt
      841 ccacgccgat ccgcttcctc caatccacgg cggacctgat gcatgccaac ttctcgccgg
      901 atgggaagct gatcgcgtac agctcgaacg agtccggccg gttcgaagtg tacgtccaaa
      961 cctttccgct cacggaccgc aaatggcagg tctcgacgag cggcggctat gaaccgcggt
     1021 ggcgcgcgga cggccgggag atctattatc tgtctgaagg ccggaagtta atggctgcgg
     1081 aagtgaaacc aggatcgtcc ttcggcgtcc cgaaagtact gttccaaacg cgggtaccgg
     1141 ccggtgtgaa tgggttgcgc accaattacg tgcccgatcg cgacggacgc aggttcctgg
     1201 tgaatacgca aagcagcgac gcaccgccag aagcgattac ggtcacggtg aactggctca
     1261 cgggacacgg tacaacaacg aatggacctg ccgcgagatg acgtgccggc gtgcttgaac
     1321 cgagatgcat cctgcggtgc gatcgttttt gctataggat ctttgttggg ggcctggctc
     1381 ggccacatga acctgcgcct cctaatcgaa cgcaagcatg gagaacaagt gatggttaaa
     1441 gctctgcgaa gtctctgctt actcggcctg ctgcccggct tggccgtgac cgcctccggg
     1501 ccgtcgcaga tcaaaggagt attgatggac aagatgtgct cgtcgaaagc tgaagagcga
     1561 ttattgccga ccggaatcga aggaggcatg atcgttgccg aggcccacac gcgcgagtgc
     1621 gctctcaagc cggcctgtca gaagagcggc tacggtgtgt acacgtacga ccagaaattt
     1681 ctgcagttcg acgcagccgg aaaccgcaag gctgtagaag cgatcaaagc atcgaagaag
     1741 ttggatgatc ttgaagtgga agtgacggga actgtagcag gcgacacgat caaggtggag
     1801 agcctgaagc tgctatagcg cggctacgat tttcggggcg ggtggaacag gtcggcaacg
     1861 ttggtttccg actcggggct cgggatatcc aggttcacga cgatgggttc ctggtcgctg
     1921 cggactacga ccgcttcgac cggctcgtcg gcgcgagcgt tgatctcctg gtgcggcacc
     1981 catggcggca caaagatgaa atcacctgga cccgcctcgt ctacgtactc gagatgatca
     2041 ccccaacgga agcgggcgcg gcctttcacg atgtacaaaa ccgtttcgag atcgccgtga
     2101 tggtgggggc ccgtcttggc gttgggttgg acgaccacag tccccgccca gattttcttg
     2161 gctccggccg tcgcgtgggt aatggccgcg gcgcgtgtca tgccgggggt t
//
LOCUS       DATAVD010000831         2414 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1940320, whole genome shotgun sequence.
ACCESSION   DATAVD010000831 DATAVD010000000
VERSION     DATAVD010000831.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2414
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1940320"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..429)
                     /locus_tag="VHX39_15935"
     CDS             complement(<1..429)
                     /locus_tag="VHX39_15935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit B"
                     /protein_id="HEX3992659.1"
                     /translation="MATEFLVLLVSALFILALAASLIPWRAGVARVLLACGATAGVIL
                     CCIALPSRPLSFSLPFGPDMGGTHFWLDANASWLLGFGFAAAVLVFVAGPSTVSPRGW
                     CFGAAMSLLGAYGVAGLQDGMSFLVAYEVMSLGGAVMIMAD"
     gene            complement(419..1213)
                     /locus_tag="VHX39_15940"
     CDS             complement(419..1213)
                     /locus_tag="VHX39_15940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HEX3992660.1"
                     /translation="MPFWTLSGLRRGNASTGWGIGDGDDGQEGVLGMPRFNPSSCDTS
                     CGACAEVCPTMAITATPGRTEPLALDYGKCVTCQLCVESCPTGALTRSHDWAFGVRNR
                     EDLQWAANRTGGEAPQRTPASFHRSLHVRHVDAGSCNACESELQALNNPFYNLHRLGV
                     FFTASPRFADLLLVTGPVTHAMRGPLLATYEAMPEPRWVMAIGTCAVAGGTAAGGEFC
                     ASGLEGILPVDIYLPGCPPNPAAMIEAFMLLLARKRQRVKGGHYGD"
     gene            complement(1224..2147)
                     /locus_tag="VHX39_15945"
     CDS             complement(1224..2147)
                     /locus_tag="VHX39_15945"
                     /inference="COORDINATES: protein motif:HMM:NF012566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992661.1"
                     /translation="MDARIGVVFAERVSGIGSFAHALAFAQACEHAAGCHVPLRARRL
                     RTLLAELERIYNHLTYLGLLADATTLKVGQAEGKLLAERAKQINGKLTGSRFLRGIVT
                     PGGCRQNIEWPAWLERELNSLRAEAEWYVRQLLETNSFRDRLITTGHLDERTAFDQGA
                     TGPIARASGLDRELRRDHPYAGYTDLAVPVPVRQEGDADARFRVRVAELFASFDIVAA
                     LSRKLEPGPVQAPCEPGSFSEGLGWAESPRGSLFYAVHFDGAGRLQRVKIKSPSFSNW
                     RVFPFTVHDSNMMDYAINEASFGLSIAGCDR"
     gene            2040..2348
                     /locus_tag="VHX39_15950"
     CDS             2040..2348
                     /locus_tag="VHX39_15950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992662.1"
                     /translation="MTAGGVFASLGEGKSVSKTADARHAFRENDTDARIQALEPPLHA
                     AMFEEKSWMIMDDGLARIIKSELSRFHDIRAYRPERQPLDVHIFHCGAIRGVPFLPDQ
                     "
BASE COUNT          518 a          772 c          737 g          387 t
ORIGIN      
        1 gtcggccatg atcatcacgg cgccgccgag gctcatgacc tcataggcga cgaggaaaga
       61 catgccgtcc tgcaggccgg cgacgccgta ggcgccgagc aggctcatcg ccgcgccgaa
      121 acaccaaccg cgtggcgaca ccgtgctggg cccggccaca aagaccaaca cagcggcggc
      181 aaagccgaaa ccaagcaacc aggacgcgtt ggcatcgagc cagaaatgcg tgcctcccat
      241 atccggccca aatggcagag agaacgacaa ggggcgtgag gggagggcga tacagcaaag
      301 gatcaccccg gcagttgcgc cgcaggccag gagcacccgg gcgacgcccg ccctccacgg
      361 tataagcgat gctgcaagcg ccaggatgaa gagggccgag accaggagga ccaaaaactc
      421 agtcgccata atggccccct ttcacccgtt gccgtttgcg cgccaggagc agcatgaacg
      481 cctcgatcat cgcggccggg ttgggggggc agcccggcag gtaaatgtcg accggtaaaa
      541 tcccttccag cccgctcgcg cagaactcac cgccggctgc ggtgccgccg gccacagcgc
      601 acgtgccgat cgccataacc caacgcggct cgggcatcgc ttcataggtc gccagcagcg
      661 ggcctcgcat ggcatgcgtc acgggtcccg tcaccagcaa taggtcggcg aagcgaggcg
      721 aggccgtgaa aaagacgccc agccggtgca gattatagaa cggattgttc aatgcctgca
      781 gttcggactc gcaggcattg caggagccgg catcgacatg gcgtacatgc aggctgcgat
      841 ggaagctggc cggtgtcctc tggggcgctt caccgccagt tcggttggcg gcccactgca
      901 agtcttcgcg gttgcgcacg ccaaacgccc agtcatgcga gcgcgtcaag gctccggtcg
      961 ggcatgactc gacgcagagc tggcaagtga cgcatttgcc gtaatcgagg gcaagcggct
     1021 ccgtccggcc cggcgttgcc gtgatggcca tggtcggaca gacttccgcg caggcgccgc
     1081 aagaggtgtc gcaagacgag ggattgaagc gcggcattcc cagcacccct tcctgcccgt
     1141 cgtcaccgtc accgattccc cagcccgtgg aggcgttgcc acgtcgcagt cccgacaatg
     1201 tccagaatgg cattcccttg ctcctaccga tcgcagccgg cgatcgagag accgaaactt
     1261 gcctcattga tcgcatagtc catcatgttc gaatcgtgga ccgtgaacgg gaacacgcgc
     1321 cagttggaga aggatggcga tttgatcttc acccgctgca accgcccggc accatcgaaa
     1381 tgcacggcat aaaaaagcga tccgcgcggg ctttcggccc aacccaaacc ttcggaaaaa
     1441 gaccccggct cgcagggcgc ctgcaccggg ccaggctcca attttcgcga aagcgcggcg
     1501 acgatatcga agctcgcaaa aagttccgcg acgcgaaccc gaaagcgcgc atctgcatca
     1561 ccttcctggc gcacgggtac agggacggca aggtcggtgt agccggcgta aggatgatca
     1621 cggcgcagct cacggtcgag tccggaggcg cgcgcaatcg ggccggtcgc gccctggtcg
     1681 aaagccgtcc gctcatcaag atggccggtg gtgatcaaac ggtccctgaa agaattcgtc
     1741 tcgaggagct ggcgcacata ccattcggct tcggcccgta gcgagttcag ctcgcgttca
     1801 agccatgcgg gccattcgat gttctggcgg cagccgcctg gcgtgacgat acccctcaga
     1861 aaccggctgc cggtcaattt gccattgatc tgcttggcgc gttcagcgag cagcttgcct
     1921 tccgcctgcc cgactttcag tgtcgttgca tccgcgagaa gcccgagata ggtcaaatga
     1981 ttgtagatgc gctccaactc cgcgagcagc gtccgcaacc gccgcgcccg gagtggaaca
     2041 tgacagccgg cggcgtgttc gcaagcttgg gcgaaggcaa gagcgtgagc aaaactgccg
     2101 atgcccgaca cgcgttccgc gaaaacgaca ccgatgcgcg catccaagcc ctcgaaccgc
     2161 cgctccatgc cgcgatgttt gaagaaaagt cgtggatgat aatggatgat ggactcgccc
     2221 gtataataaa aagtgaactc agcagattcc acgacatccg cgcgtaccgg cccgaacggc
     2281 agccgttgga tgtccacatt ttccattgcg gggctatccg cggcgtcccg ttcctgccgg
     2341 atcaatgaat aaggttgcgg gtggttatga aattctacgc catagagatc gctgatctca
     2401 cgctcatacc accc
//
LOCUS       DATAVD010000832         1724 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1008825, whole genome shotgun sequence.
ACCESSION   DATAVD010000832 DATAVD010000000
VERSION     DATAVD010000832.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1008825"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(116..1306)
                     /gene="metC"
                     /locus_tag="VHX39_15955"
     CDS             complement(116..1306)
                     /gene="metC"
                     /locus_tag="VHX39_15955"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004449132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004121 - cystathionine beta-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HEX3992663.1"
                     /translation="MAKRGFRTTLSHTGRKSKHEHGFVNPPLLRGSTVLSPTVADRVA
                     GQAKRGERVLTYGLGGSETHWALEDVIAEIEGGTRCAIVCSGLAAVTTPLLAFLKAGD
                     HLLMPDSVYGPSRNFAGGMLTRFGVETTFYDPVIDEAGLTALMRSNTTVVYTESPGSH
                     TFEVQDIPALARVAHARGAKLLMDNTWGIHHFQPFEHGVDVSIQAATKYPAGHSDILI
                     GSITVNSDEDWHTLHATTRGLGQYASPDDCWMTLRGLRTMGVRLAHQMDAGIEVAHWF
                     SRRPEVKQVLHPALPGAPGHAIWKRDFTGACSLFGVEFKPEFSAESTHAFVEALELFG
                     IGASWGGFESLALPTTGFVTRTASAKFAGPLVRLHIGLEDVDDLIADLEHGLKVMREF
                     GGTV"
     gene            complement(1309..>1724)
                     /locus_tag="VHX39_15960"
     CDS             complement(1309..>1724)
                     /locus_tag="VHX39_15960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX3992664.1"
                     /translation="FLPEFRATRLRGVGDVMRNVASQSELVLDARAAGRFTGATPEPR
                     AGMRSGHIPGSENVPYTDLLHADGTFRSVAEVKARLAKAGVDGSLPIVTSCGSGVTAC
                     ILTLGLHLAGLPEGAVYDGSWTEWGGRSDTPVETN"
BASE COUNT          296 a          587 c          550 g          291 t
ORIGIN      
        1 atggcatgcc gaattccact gtcgctccag accctgcgac gatcaataat cgctttttgt
       61 cgtccacttt gccaatctat gctgcctagg cagcgaacag gaactccacg tcattctaca
      121 ccgtgccccc aaactcccgc atcaccttca gcccgtgctc caggtcggcg atcaggtcgt
      181 ccacgtcctc cagcccgata tgcaaccgca ccagcggccc cgcgaacttc gcgctggcgg
      241 tgcgcgtgac gaaacctgtt gtcggcaacg ccagactctc gaagccgccc cacgaggcgc
      301 cgatgccgaa cagctccagc gcctcgacaa acgcgtgcgt gctctctgcc gagaactccg
      361 gcttgaactc gacgccgaac aggctgcatg cgccggtgaa gtcgcgcttc cagatcgcgt
      421 gaccgggggc gccgggcagc gcgggatgca gcacctgctt cacctcggga cgccggctga
      481 accaatgggc gacctcgatg ccggcatcca tctgatgcgc cagccgcacg cccatggtgc
      541 gcaacccgcg cagcgtcatc cagcaatcgt cggggctggc atactggccg aggccgcgcg
      601 tggtggcgtg cagcgtgtgc cagtcctcgt cggagttcac cgtgatgctg ccgatcagaa
      661 tgtcggagtg cccggctggg tatttcgtgg cggcctggat cgacacatcg acgccatgct
      721 cgaacggttg gaagtgatgg atgccccagg tgttgtccat cagcagcttg gcgcctcgcg
      781 cgtgcgcgac acgggcgagt gccgggatgt cctgcacctc gaaggtgtgg ctgcccgggc
      841 tttccgtata cacaaccgtg gtgttggagc gcatcagcgc ggtcagcccg gcctcatcga
      901 tcaccggatc atagaacgtg gtttccacgc caaagcgcgt cagcatcccg ccggcgaagt
      961 tgcgcgacgg accgtagacg ctgtccggca tcagcagatg atcgccggcc ttcaggaacg
     1021 ccagcaacgg cgtggtgacc gcggcgaggc cggaacagac gatggcgcag cgggtgccgc
     1081 cttcgatttc cgcgatcacg tcctccagcg cccaatgcgt ctcagagcca cccaggccat
     1141 aggtcagcac ccgctcgccg cgcttcgcct gtccggcaac acgatcggcc accgtggggc
     1201 tgagcaccgt ggacccgcgc agcaacggcg ggttgacgaa gccgtgttcg tgtttgctct
     1261 tgcggccggt gtgcgacagc gttgtgcgga aacctcgctt tgccatgatc agttcgtttc
     1321 caccggtgtg tcggagcggc cgccccattc ggtccaggac ccatcgtaga ccgcaccctc
     1381 cggcaggccg gcgagatgca ggccgagggt caggatgcag gcggtcacgc cggaaccgca
     1441 actggtcacg atcggcaaag acccatcgac gccggccttc gcgagtcgcg ccttgacctc
     1501 ggcgacagac cgaaatgttc cgtcggcgtg cagcagatcg gtgtacggaa cgttttcgga
     1561 gccggggatg tggccggatc gcatgccggc cctcggctcc ggtgtcgcgc cggtaaaacg
     1621 gccggcggcg cgggcgtcca gcaccagttc ggactgcgac gccacgttgc gcatcacgtc
     1681 gccgacgccg cgcagcctgg tggcgcggaa ttccggcagg aacg
//
LOCUS       DATAVD010000833         2970 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1568331, whole genome shotgun sequence.
ACCESSION   DATAVD010000833 DATAVD010000000
VERSION     DATAVD010000833.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2970
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1568331"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1188)
                     /locus_tag="VHX39_15965"
     CDS             complement(<1..1188)
                     /locus_tag="VHX39_15965"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEX3992665.1"
                     /translation="MLIPLRLVRDQQLQQQLFEQLRDLILSNRLQPGSRMPSSRMMAE
                     QFAISRMTVLLTYERLIAEGYLETRPAAGTFVAQLPAHAVSGFAVDASPLALAHPPKE
                     RPTDRHNGSAFAVPDVRVGSADPSLFPAQRWRSLIRHGLDRIGTRYEREHPAGHPALR
                     DAIAQWLSTSRGLPVTADQVILVKGRQQAMHVVARLASHPCEGRRAAGRCTAQNSEPP
                     ARFHGAEGRHDTTDGNDATTGHARIVVEDPCDADAAAAMAGEGVALLRIPVDCDGLRT
                     DHLPPGGSALIHVTPEHQRPLGVVLSRDRRIALLHWAADAGALVLEEDIDGELRYGDM
                     NVPSLMSLDRSERVILLGGFGASLGPWLDLAYLVLPRWLIQYAQTMRRWIDDSRGGFE
                     HAVL"
     gene            1495..2712
                     /gene="hemA"
                     /locus_tag="VHX39_15970"
     CDS             1495..2712
                     /gene="hemA"
                     /locus_tag="VHX39_15970"
                     /EC_number="2.3.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003870 - 5-aminolevulinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-aminolevulinate synthase"
                     /protein_id="HEX3992666.1"
                     /translation="MTEFRAFCRASLSEIRAQQRYRRFTPLHKQADRFPIYRDAEGRD
                     ELVWSSNDYLAMGGHPVVVEAACAAARSMGVGAGGTRNISGTSPLHDALEAELASLHG
                     KQAGLLFTSGFVSNQAALSTILNSLPNGPEQPWQVFSDARNHASMIAGIKGSRAQCSI
                     YQHNDMAHLEALLRAAPPAAPKLIAFESVYSMDADIAPIGAICDLAARFGAMTYLDEV
                     HAVGMYGPNGGGVSERDGVAHRVDIIEGTLAKAFGCHGGYITGDAEVIDFIRCTAPGF
                     IFTTSLPPPIMAAALASVRHVRQDHARRARLFERADALKRRFGHAGLPLIESASHIVP
                     LHVGDAALCTEISQRLLAEFGMYATPINYPTVPRGEERLRFTPSPLHTDTMMDGLVAA
                     LTAVVPIERRKAA"
BASE COUNT          536 a          944 c          963 g          527 t
ORIGIN      
        1 cagaaccgcg tgctcgaacc caccccggct gtcgtcgatc caccgtcgca tcgtctgagc
       61 gtattggatc agccagcgcg gcagcaccag gtaagcgagg tcgagccagg gaccgagtga
      121 agcgccgaag ccgccgagca ggatgacccg ttccgaccgg tccaggctca tcaacgaggg
      181 gacgttcata tcgccgtagc gcaactcccc gtcgatgtcc tcttccagga ccagtgcccc
      241 ggcatcggca gcccaatgga gtagggcgat gcgccggtcg cgcgagagga caacgccaag
      301 cggccgttga tgctcggggg tgacgtggat caatgcgctg ccgcccggtg gcagatggtc
      361 ggtgcgcaag ccgtcgcaat cgacggggat gcgcagcaac gcgacgccct cgccggccat
      421 ggcggcagcc gcgtctgcgt cgcatgggtc ttccacgacg attctggcat gacccgtcgt
      481 cgcgtcgttg ccatcggtgg tgtcgtgacg cccctcggcg ccgtggaagc gtgccggcgg
      541 ttcgctgttc tgtgcggtgc aacgtccggc cgcgcggcgt ccctcgcaag ggtgcgatgc
      601 caggcgggca accacatgca tcgcctgttg ccggcctttc accagaatca cctgatcggc
      661 ggtgaccgga aggccgcgtg acgtggacag ccattgcgcg atggcatccc gtaatgccgg
      721 atgaccggcc gggtgctctc gttcgtatcg tgtgccgatc cggtccagcc catgccggat
      781 caaagagcgc cagcgttgcg ccgggaacag cgacgggtcg gcactgccaa cacgaacgtc
      841 cgggacggca aatgcggacc cgttgtggcg atctgtcggc cgttctttgg gcgggtgggc
      901 cagggcgagc ggagacgcat cgaccgcaaa cccggatacc gcatgggccg gcaattgcgc
      961 gacgaaggta ccggccgccg gcctcgtctc cagataccct tcggcgatca ggcgttcgta
     1021 tgtcaacagc acggtcatgc gcgaaatggc gaattgttcc gccatcatgc ggctggatgg
     1081 cattcgcgat cccggttgca gccggttgga caggatcagg tcgcgcaatt gttcgaaaag
     1141 ctgttgctgc agctgctgat cgcgcaccag ccggagtggg atcaacatgg cgaagcgcgc
     1201 gcaataatgg ccacataaga caatggcatg cctggcggat cctaacgttg ccgccggaca
     1261 ctgaaccgca gcggtaaacg ccaggttaat aacgccagag aaatctgtcg tcgtgttgga
     1321 caattgatga gccaataacg gagccataac tacagatgaa ctgatgccat acgtaacacg
     1381 atgatgacca attcgtttgc tctgcatcag tgagcgcggt atgcttcgtg cgattattgg
     1441 cctggcggcc gtagactgaa ttgatactgc tgcgcgcgac gggggttttc cggaatgacg
     1501 gagtttcgtg ctttctgccg tgcgtcactg agcgaaatcc gtgcccaaca gcgctatcgc
     1561 aggttcacgc cgctgcacaa acaggctgat cgctttccaa tctaccgtga tgctgagggc
     1621 agagatgagc tcgtctggtc ctccaacgac tacctcgcca tgggcggcca cccggtcgtc
     1681 gtcgaagccg cctgcgccgc ggcgcgcagc atgggcgtcg gcgccggcgg cacccgcaat
     1741 atcagcggca ccagcccgct gcacgacgca ctggaggctg agctcgcctc actgcacggc
     1801 aagcaggccg gcctgttgtt cacctccggc ttcgtctcca atcaggccgc gctgtccacc
     1861 atcctgaatt cgctgcccaa tggcccggag cagccctggc aggtgttttc cgacgcccgc
     1921 aaccacgcct cgatgatcgc cgggatcaag ggctcgcggg cgcagtgctc gatctaccag
     1981 cacaacgaca tggcgcatct ggaggcgctg ctgcgcgctg ctccgcccgc cgcgcccaaa
     2041 ctgatcgcgt tcgagtcagt gtattcgatg gacgccgaca tcgcgccgat cggtgcgatc
     2101 tgcgacctcg cggcacgctt tggtgcgatg acctatctcg atgaggtgca cgcggtcggc
     2161 atgtacggcc cgaacggcgg cggcgtcagt gaacgcgacg gcgtggcgca ccgggtcgac
     2221 atcatcgagg gcacgctcgc aaaggcgttc gggtgccacg gcggctacat taccggcgac
     2281 gccgaggtga tcgatttcat ccgctgcacc gcgccggggt tcattttcac cacctcgctg
     2341 ccgccgccga tcatggcggc cgcattggcc agcgtgcggc atgtgcgcca ggaccacgcg
     2401 cggcgggcac gattgttcga gcgggcggat gcgttgaagc ggcggttcgg ccacgccggg
     2461 ttgccgttga tcgagtcagc cagccacatc gtgccgctgc atgtgggcga tgcggcattg
     2521 tgcaccgaga tcagccagcg gctactggcc gagttcggca tgtatgcgac gccgatcaat
     2581 tatcccacag tgccgcgcgg cgaggaacgg ctgcggttca cgcccagccc gctgcatacc
     2641 gatacgatga tggatgggct ggtggcggcg ctgacggcgg ttgtcccgat cgagcggcgc
     2701 aaggccgcct gacctcgcag cattatttgc cgatcgacca atacggcggc cgcgccgaag
     2761 tgcggcgagg acgttgtgcc cgaactgcgg tgaacaagac gggaacgttg aatcgatgcg
     2821 gcgtatctta acgaaattcc acccttctgc cgcttcttaa gacattgtta agcccgggct
     2881 gcgaatactg cgcgaatgct gccgtcgacc attcgcatcc gatccaaccc gatcgtcgcc
     2941 cgcctgagac gctggccgga acattggcgc
//
LOCUS       DATAVD010000834         5926 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3617258, whole genome shotgun sequence.
ACCESSION   DATAVD010000834 DATAVD010000000
VERSION     DATAVD010000834.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5926
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3617258"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..832)
                     /locus_tag="VHX39_15975"
     CDS             complement(<1..832)
                     /locus_tag="VHX39_15975"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3992667.1"
                     /translation="MIATIDEAARYYAARDLGQAARVCLEIIQANPRHFDALHLLGVI
                     CTNQGQHADGTGYLLRAEALRSDDGRLWANLGAAFGAVQRFDKAVHAYQQALALNDRD
                     AGVLNNMGLALQGLERRQEALDTLRGALALDPANDPALYNLARAQVAVGNLGEGEAEF
                     RRLQARLAPGTPVQRIAEVTNELARAVADQRRVEDSLEILRTAAAQHPGIVSFRWHEA
                     LLLLQLGRFKEGWAAYETRWDAPGHDRAHADYSVLDLRHVAGQRVLVKGEQGRGDVIQ
                     F"
     gene            complement(829..2511)
                     /locus_tag="VHX39_15980"
     CDS             complement(829..2511)
                     /locus_tag="VHX39_15980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX3992668.1"
                     /translation="MTQPRLGGHILAASLVAQGIDHVFEVPGESFLDTLDGLHDTRNS
                     LKLVTCRFEAGAVNMAEAYGKLKGKPAAAMVTRGPGACHGSIGVHIAMQDSTPMLLFV
                     GQIPHEDTGRDAFQEVDYRQMFAPLAKWVTQIDHAHRIPEIVAHAVDVAVSGRPGPVV
                     IALSEEMQKHTADVPDLPRVPVSVAHPDPAALRKMREMIAAAKRPIAVVGGSCWTEAG
                     RAALGAFLVRNNIPITVGFRRQAHYDGAQENFAGDLGVGSDPGLIRKIGEADLILALG
                     SRLGDAVTQGYTLLDMAGAVPIIQVLPDGAEIGRVFRPALGIVADLNVFAHALAALEP
                     VAPAWSAWTRELRSLREAQRAVPNYEGSLNLGTVMRELETMLTEDAIVTTDAGNFAGW
                     ATRFLNFSDKQRYIGPTNGAMGYSVPAAIGASITFPGRMVVSMVGDGGFMMTGQELAT
                     AFHHGSAPIVLVFNNNQFGTIRMHQERAYPWRVSGTQVTNPDFSKYIGAFGGYGEVVS
                     ETAAFAPAFRRAVGSGKPAVIELRMNPDQITTRATVADMRAGKTPPPDTSGA"
     gene            complement(2508..3851)
                     /locus_tag="VHX39_15985"
     CDS             complement(2508..3851)
                     /locus_tag="VHX39_15985"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3992669.1"
                     /translation="MPEKRMMRLGAFMRPVGIHTAWWRYPGAWPDANFNLKHIVRLAQ
                     KLEAGKFDAFFMADHLAVLNMPMAALKRSATVTSFDPMALLPALAMVTERLGLIATGS
                     TTFDAPYHVARRFASLDHVSEGRAGWNIVTTSNPDSALNFGLDEHMDHDERYRRAREF
                     FDVVTGLWDSFADDAFIRDVENGIYFDPARMHVLDHVGKYFKVRGPLNIARPVQGWPL
                     IVQAGASDSGRQLAAETAEMIFSPGGLIGDCQNYYNDIKARAAAAGREPEHVKILPGC
                     LVVVGDTDEEARAKRAKLDSLVHPDSGIAALSIALGMDASKFELDSPLPDIPETNQSK
                     SGRDRVIARARRDNPTVRQLAQVLGAYGGLSMVGTAKTIADKMEEYFDAKACDGFNIM
                     FPWVPGGLDEFVDHVVPELQRRGVFRKEYEGKTLRENLGVPRPPNRFFPQTVGFK"
     gene            complement(3864..5435)
                     /locus_tag="VHX39_15990"
     CDS             complement(3864..5435)
                     /locus_tag="VHX39_15990"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3992670.1"
                     /translation="MQRRHFLAGAASGVLARPAIAGNAKTLIFVPQVNLTSLDPVWTT
                     ATATRNFALMVYEGLYGRDQQFVPRPLMVEGHVIDDDGKRWTMKLREGLLWHDGTKVL
                     ARDCVASLQRWMKRDATAPIILDRVEVFEATDDRTIVWRLRRPFPLLAHFLSKVQPQP
                     VMMPERLAALDPFKQMTEIVGSGPLKFLPDEYVSGIHAGFARFDGYVPRQEPPSYNAG
                     GHKVNVDKVEWRVIPDVSTAASALTAGEVDWLELPQPDLIPMLEKANGVTTGLLDIYG
                     TVSILRPNHITTPTNNAALRRAMLAAIDQKEVMVAAMGEVPDTWKAPMGFIVPGMPSA
                     TEAGMDNVRKRKTIDELKRMVEQSGYAGEPLAFLHPTDQLIYHAVATVAVDAFRKIGI
                     NVDEQMVDWGTIVQRRTSKEPVNKGGWSMFPAGAPAPEMVDPMLSNVMRSNGAKAWFG
                     WPDDPKIETAYNAWLDASTDAERRKLEAEYQLAAFQSVPIITCGTYMPHAAWRSNLTG
                     LVKGSAPVFWGVEKT"
     gene            complement(5437..>5926)
                     /locus_tag="VHX39_15995"
     CDS             complement(5437..>5926)
                     /locus_tag="VHX39_15995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HEX3992671.1"
                     /translation="IYAIGDVTDHMNLTPVAIAEGHALADTLFGNNPREASLLNVPSA
                     VFSTPPISTVGLTEEDAASMGPVDVYLTKFTPMRHNLSGRKRQSTMKLVVDQASQKVV
                     GVHMLGEDAPEIVQGLAIAVVMGATKQDFDRTIGIHPTAAEEFVTLRTRTRVAGVAKA
                     AE"
BASE COUNT         1088 a         1911 c         1820 g         1107 t
ORIGIN      
        1 ggaactggat gacgtcgcca cgaccttgct cgcccttcac cagaacgcgc tgtccggcca
       61 catgacgcag atcgagcacg ctatagtcgg catgggctcg gtcgtggcca ggcgcgtccc
      121 agcgcgtctc ataggccgcc caaccttcct tgaaccggcc cagttgcagt agcagtaatg
      181 cttcgtgcca gcggaacgag acgatgccgg ggtgttgcgc agccgcggtg cgaaggatct
      241 ccagcgagtc ttcgacccgc ctctgatctg ccaccgcgcg ggccagttcg ttggtgactt
      301 cggcgatccg ctgcaccggc gtcccgggag ccaatctggc ctgcagcctc cggaactccg
      361 cctccccttc ccccagattt cccactgcga cctgggcgcg ggccaaattg taaagcgccg
      421 gatcattggc ggggtcgagt gccagcgcac cgcgcaacgt gtcgagcgct tcctgccgcc
      481 gctccagccc ctgcaatgcg aggcccatat tgttcaacac cccggcatcc cggtcattca
      541 acgccagggc ttgctgatag gcgtggacgg ctttgtcgaa gcgctgcacg gcaccgaatg
      601 cggcgcccag attggcccac aaccgcccgt cgtcggatcg caaggcctcg gcgcgcagca
      661 aatagccggt gccgtcggca tgctgtccct gattggtgca gatcacgccc agaaggtgca
      721 aggcgtcgaa atgccgagga ttggcctgga tgatttccag gcagacccgc gccgcctggc
      781 cgagatcacg agcggcgtaa taccgcgctg cttcgtctat cgttgcgatc atgcaccgct
      841 ggtgtcgggc ggcggtgtct tgccggcccg catgtcggcg accgtggcgc gggtggtgat
      901 ctggtcggga ttcatccgca gctcgatgac cgcaggcttg ccgctgccta ccgcacggcg
      961 aaacgccgga gcgaatgcgg cggtctcgct gaccacttca ccatagccgc cgaacgcccc
     1021 gatatacttc gaaaaatccg ggttggtgac ctgggtgccg gagacgcgcc agggataggc
     1081 ccgctcctga tgcatccgga tggtgccgaa ttgattgttg ttaaacacca gcacgatcgg
     1141 cgcggaaccg tgatgaaagg cggtggcaag ttcctgaccg gtcatcatga agccgccgtc
     1201 gccgaccatg ctgacgacca tccggcctgg aaacgtgatc gacgcgccga tcgcggcggg
     1261 gaccgagtac cccatcgcgc cgttggtcgg cccgatataa cgttgcttat ccgagaagtt
     1321 gagaaaccgc gtggcccaac cggcgaagtt gccggcatcc gtggtcacga tggcatcttc
     1381 ggtaagcatc gtttccagct cgcgcatcac cgtgccgagg ttcaggctgc cctcgtagtt
     1441 cggcaccgct ctttgggctt cccgtaacga tcgcaactcg cgggtccagg ccgaccaggc
     1501 gggtgcgacc ggttccagcg cagcgagggc atgggcgaag acgttcaggt cagcaacgat
     1561 acccaaagcc ggcctgaaca cccggccgat ttccgcaccg tccggcagca cctggatgat
     1621 cggcacggcg cccgccatat cgagcagcgt gtagccttgc gtcaccgcat cgcccaaccg
     1681 gctgccgagc gcgaggatca ggtccgcctc accaatcttc ctgatcagac ctggatcgga
     1741 tccaaccccc agatctccgg caaaattctc ctgggcgcca tcgtaatgcg cctggcggcg
     1801 gaagccgacg gtgatcggaa tattgttgcg gaccagaaat gcaccaagcg cggcacgccc
     1861 cgcttcggtc caacaggagc caccaaccac cgcgatgggc cgtttcgctg ccgcgatcat
     1921 ttcccgcatt ttccgcagtg ccgccgggtc gggatgtgcc accgacaccg ggaccctcgg
     1981 cagatcgggg acatcggcag tgtgcttctg catttcctcc gataacgcaa tgaccaccgg
     2041 gcctggccgg ccagacaccg caacatccac ggcatgtgca acgatttccg gaatgcggtg
     2101 ggcgtggtcg atctgcgtca cccatttcgc caacggagca aacatctggc ggtaatcgac
     2161 ttcctggaac gcatcgcggc cggtgtcctc gtgagggatc tggccaacga acagcagcat
     2221 cggcgtgctg tcctgcatcg cgatgtgcac gccgatcgag ccgtggcagg cacccggtcc
     2281 gcgcgtgacc atcgccgcag ccggcttgcc cttcagcttg ccgtaggcct cggccatgtt
     2341 gaccgcaccg gcctcgaacc ggcaggtgac cagtttcagg ctgttacgag tatcgtgcag
     2401 cccgtccagc gtatcgagga aactctcccc cggcacctcg aacacatgat cgatgccttg
     2461 cgcgaccaga gaagctgcca ggatgtggcc acctaaccga ggttgcgtca tttgaacccc
     2521 acggtttgcg ggaaaaaccg gttcggcggc cgcggcacgc caaggttttc ccgaagcgtc
     2581 ttgccttcgt attccttgcg gaacacacca cggcgctgca gttccggaac gacatggtcg
     2641 acgaactcat ccaggccgcc aggcacccag gggaacatga tgttgaaccc gtcgcaggct
     2701 ttggcgtcga agtattcttc catcttgtca gcgatcgtct tcgccgtgcc gaccatcgac
     2761 agcccgccgt aagcacccaa tacctgggct aattgccgga ccgtcggatt gtcccgccgc
     2821 gcgcgcgcaa tcacgcgatc gcggccgctt ttgctctggt tggtttcggg aatgtccggc
     2881 aatggcgagt ccagctcgaa cttcgatgcg tccatgccga gcgcgatcga caacgccgcg
     2941 atgccactgt cgggatgcac gagactgtcg agcttcgcac gtttggcgcg ggcttcttcg
     3001 tcggtgtcac cgaccacgac cagacagccg ggcaggatct tcacgtgttc cggttcccgt
     3061 ccggctgctg cggcgcgggc tttgatgtcg ttgtagtaat tctggcaatc gccgatcagg
     3121 ccgccaggtg aaaagatcat ttccgcagtt tcggcggcca gttgacggcc ggagtccgag
     3181 gcgcctgcct gcacgatcaa cggccagccc tgcaccggac gggcaatgtt caacggcccg
     3241 cgaactttga agtactttcc cacatgatcc aacacatgca tgcgggcggg gtcgaaatag
     3301 atgccgtttt cgacatcgcg gatgaaggcg tcatcggcga aggaatccca caggccggtg
     3361 acaacgtcga aaaactcacg ggcgcggcgg tagcgttcgt catgatccat gtgttcgtcg
     3421 agcccgaaat tcaacgccga atcagggttc gatgtggtga cgatattcca gccggcgcgg
     3481 ccctcactga catgatccag cgaggcgaag cggcgggcga catgatacgg cgcgtcgaac
     3541 gttgttgagc cggtcgcgat caggccaagc cgctcggtga ccatcgccag cgccggcagc
     3601 aacgccatcg gatcgaacga ggtcaccgtg gcactgcgct tcaatgccgc catcggcatg
     3661 ttcagcacgg ccagatggtc ggccatgaag aaagcgtcga acttgccggc ttccagcttc
     3721 tgcgccagcc ggacaatgtg cttcaaattg aagttggcat ccggccacgc gccgggatag
     3781 cgccaccagg cagtatgaat accgaccggc cgcatgaatg cacccagccg catcattcgc
     3841 ttttcaggca tggtcgcggt tccttacgtc ttctccacgc cccagaacac cggggccgag
     3901 cctttgacaa gaccggtcag attggatcgc caggcggcgt gcggcatata ggtgccgcag
     3961 gtgatgatcg gcaccgactg gaacgcagcc agttggtact cggcctcaag cttacggcgc
     4021 tcggcatcgg tggaggcgtc gagccaggcg ttatacgcgg tctcgatttt cggatcgtcg
     4081 ggccagccga accaggcctt ggcgccgttg ctgcgcatga cattggacag catcggatcg
     4141 accatctcgg gtgccggcgc gccggccgga aacatcgacc agccgccttt gttgaccggc
     4201 tccttcgagg tgcggcgctg cacgatggta ccccagtcga ccatttgctc atcgacgttg
     4261 ataccgattt tgcggaatgc atcgacggca acagtggcaa ccgcatggta gatcagttgg
     4321 tcggtgggat gcagaaaggc cagcggttcc cccgcgtagc ccgattgttc caccatccgt
     4381 ttgagttcat cgatcgtctt gcgtttgcgc acgttatcca tgccggcctc ggtggcagag
     4441 ggcataccgg gcacgatgaa gcccatcggt gccttccagg tgtccggcac ctcgcccatc
     4501 gccgcgacca tcacctcctt ctggtcaatg gcagccagca tggcccggcg cagcgcggca
     4561 ttgttggtcg gtgtcgtgat gtggttcggc cgcaggatcg acacggttcc gtaaatatcg
     4621 agcaaaccgg tggtgacgcc gttcgccttc tccagcatcg ggatcagatc gggttgcggc
     4681 agttcgagcc agtcgacctc cccggcggtg agtgccgacg ctgcagtcga cacgtccggt
     4741 atgacccgcc actccacttt gtcgacattc accttgtggc caccggcgtt gtaggacggc
     4801 ggttcctgcc gaggcacata accgtcgaac cgtgcaaagc cggcgtgaat gcccgagacg
     4861 tattcgtccg gcaggaattt caacggcccg ctaccgacga tctcggtcat ctgcttgaac
     4921 ggatcgagcg cggcgagccg ttccggcatc atcacgggct gcggctgcac cttggacaaa
     4981 aaatgcgcca gcagagggaa tggccggcgc agccgccaga cgatggtgcg gtcgtcggtg
     5041 gcctcgaaga cttccacgcg atccaggatg atcggtgccg tggcgtcacg tttcatccag
     5101 cgctgcagcg acgcgacaca gtcccgcgcc agcaccttgg tgccgtcgtg ccacaacagc
     5161 ccctcgcgca gtttcatggt ccagcgtttg ccatcgtcgt cgatgacatg gccttcaacc
     5221 atcaatggac gcgggacgaa ttgctggtcg cggccataca ggccctcgta gaccatcagc
     5281 gcgaagttgc gggttgcggt tgcggtggtc cacaccggat ccaaactggt caggttgacc
     5341 tgcggcacga aaatcaaggt tttcgcattg ccggcgatcg ccggccgagc caagacgccg
     5401 gaagcggcgc cggccagaaa atgacgtcgc tgcatgttat tctgccgcct tggccacgcc
     5461 ggcaacccgg gtccgggtgc gcaacgtcac gaattcctct gccgctgtcg ggtgaatacc
     5521 gatggtgcgg tcgaaatcct gtttggtggc acccatgacc accgcaatgg cgaggccttg
     5581 cacgatttcc ggcgcatcct cgcccaacat atgcaccccg acgaccttct ggctggcctg
     5641 atcgacgacc agtttcatgg tcgattggcg cttgcgtccc gacaggttgt gccgcatcgg
     5701 ggtaaatttc gtcaggtaga catcgacggg gcccatcgac gccgcatctt cctcggtcaa
     5761 accgaccgtg ctgatcggcg gagtggagaa cacggccgac ggcacgttga gcagcgatgc
     5821 ctcgcgcggg ttgttgccga acagcgtgtc ggccaaagcg tggccctcgg cgatcgcgac
     5881 cggcgtcagg ttcatgtgat cggtgacgtc gccgatggca tagatg
//
LOCUS       DATAVD010000835         4234 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_81453, whole genome shotgun sequence.
ACCESSION   DATAVD010000835 DATAVD010000000
VERSION     DATAVD010000835.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4234
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81453"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..199)
                     /locus_tag="VHX39_16000"
     CDS             complement(<1..199)
                     /locus_tag="VHX39_16000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992672.1"
                     /translation="MSVDTATQEPAIRVEKHAVPAWNPPSRPDQTPVAIVVEKPAPKP
                     EAQPNVLSAVPELIKLGSAVEK"
     gene            534..863
                     /locus_tag="VHX39_16005"
     CDS             534..863
                     /locus_tag="VHX39_16005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEX3992673.1"
                     /translation="MPKFVTIGYGDRAGYERTAPEVRNAAHAHDGELQNHGALMGIAH
                     APVQVRNPDAAGVQTINGPFMTSPLPVAGFAVIEAADLSEAVALVSQSPCAVAHGVVE
                     VWPLEQM"
     gene            1054..1476
                     /gene="arfB"
                     /locus_tag="VHX39_16010"
     CDS             1054..1476
                     /gene="arfB"
                     /locus_tag="VHX39_16010"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome rescue aminoacyl-tRNA
                     hydrolase ArfB"
                     /protein_id="HEX3992674.1"
                     /translation="MIPVTKTISLDDTELHEDFLRSSGAGGQNVNKVETAVQLRFDVR
                     NSPSLTDAVRTRLERLAGRRLTKDGVVVIAAQRYRTRERNREDAMDRLLTLIREAATP
                     PPPPRRPTKPTRGSKERRLEDKTHRAGVKLLRGRPTDS"
     gene            1541..3115
                     /locus_tag="VHX39_16015"
     CDS             1541..3115
                     /locus_tag="VHX39_16015"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3992675.1"
                     /translation="MIGRRRTLQGLAATSLARPALAAGTKTLSIVPQATLNSVDPIWS
                     TSQISRNLGFMVFEPLYGRDADLMARPLMVEADQMEDGGKRWTMRLRPKMLFHDGQPV
                     RAQDCVASLGRWMKRDAAGLALAARLDALEAADDHTILWRLSKPFPHLRALLSKVVQP
                     ALMMPERVAKTDPFKQITEVVGSGPFRWLADEHVLASHAAFARFDGYVPRDEPPSYMA
                     GGHRVLLDRVEWKMIPDAGTAANALMTGEIDWIEIPLPDLLAMLRKAPGVTTGVLDKS
                     GQIMMLRPNHLIAPTNLMAVRQTMLAAISQAEVVSAVMGADPANGTTGVGFLATGNST
                     IDDAGLDVVRQRHTRDELRSMLERSGYAGEKLVLLHATDHIFFNPMGAVIANMLTQAG
                     LAVDDQAMDWPTVQTRRVSKAPLDKGGWSMFPSLVAVTEYRDLLLTSFMRGNGRDGWF
                     GWPNDPRMEEIFDHWLAASDPAEQISLERDYELEGLRTLPFIPLGRFRQTSAWRDNLS
                     GLLDGPSVVFWNVTKA"
     gene            3393..3647
                     /locus_tag="VHX39_16020"
     CDS             3393..3647
                     /locus_tag="VHX39_16020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992676.1"
                     /translation="MNIIKTLGFAAVAALSLGVGAAMAQVDGVDAGAAGFPANSPAMT
                     APAARPAAVQSGSSDVDSARPATMLPGNYYDVGTGGSSGG"
     gene            complement(3644..>4234)
                     /locus_tag="VHX39_16025"
     CDS             complement(3644..>4234)
                     /locus_tag="VHX39_16025"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate binding domain-containing protein"
                     /protein_id="HEX3992677.1"
                     /translation="LIKRSLGEIARVAVAAPEYLGRRGVPLQPADLTDHACIVHRVTP
                     NDSEWRLIGGDGVVSVTVQGALSTNNHAAVRSAALGGLGIALLPEYQIVDDVLAGRLQ
                     QVLPNYKSEPLPAYLVYPSRRHLAPRTRVVIDFLITEVRRLRSRQTDRSSAPEVIALA
                     TGERMIFTPASEELDPPQELGRRARRPFPPQSEAAI"
BASE COUNT          827 a         1263 c         1348 g          796 t
ORIGIN      
        1 gtttttcgac tgcactgccg agcttgatca gttcaggcac cgccgacaaa acgtttggct
       61 gtgcttcagg ctttggcgcc ggtttctcga caacgatggc gaccggcgtt tgatcgggtc
      121 ggctgggcgg gttccaggcc ggtactgcgt gtttctcgac gcggatcgcc ggctcctggg
      181 ttgcagtgtc gacgctcatg tggtcctcca gatttaccgc acaacgcgct ggtcacagta
      241 tccccgcaca atgacagtaa cgtcgcaccc tatacgttaa ccgtaaccgt gcgctcggac
      301 tgtttgcggc atggtttcga ttggcgcgcg gcaacggtgc ggttcttcat gtgatggaaa
      361 ggggttaaga aagtgtgcac caaccgcgaa gtgcgatgtt aacgcctggc gttggcatcg
      421 gaaccgtggc gcgtatcaag gcggcaactc ctatgagcgg cttaggaacg ggacggctgc
      481 cgaaacgtgt gcgaccaggc tacacaactg ccggtcaaac caaggagagg accatgccga
      541 agttcgtgac gatcggctac ggcgaccgcg cgggatacga gcgcaccgca ccagaggttc
      601 gcaatgccgc acacgcgcac gatggagagt tgcagaacca cggggcgttg atgggcatcg
      661 cccatgcgcc ggtgcaggtc cgcaatcccg acgctgcggg agttcagacg atcaatggtc
      721 cattcatgac gtcaccatta cccgtggccg gcttcgcggt gattgaagct gccgacctgt
      781 ccgaggcggt tgctctggtc tcgcaatcgc cctgcgctgt ggcacacggt gtcgtggaag
      841 tctggccttt ggagcaaatg tagtggctca cgctgagttc aaccatgact cgggttactc
      901 gttgatccgg ttgaacaaat cccgcactgc gagcggccgg ccgctgtgga catattactc
      961 tgacaaaacc agttccgtcg acctccgggc gccattcgcc tgtacgactt tgaatcataa
     1021 caagatgaca atcacgttgg actgtcctgc atgctgatcc ctgtcacgaa gaccatttcg
     1081 ctcgacgata ccgaactgca cgaggacttt ctgcgctcct ccggcgccgg cggccagaac
     1141 gtcaacaagg tcgagacggc agtgcagttg cgcttcgatg tccgcaactc gcccagtcta
     1201 acggatgcgg tgcgcaccag gctcgaacgt ttggcgggac gccgtctgac caaggacgga
     1261 gtggtcgtta tcgctgcgca acgctaccgc acgcgggagc gcaaccgaga agacgccatg
     1321 gaccggctgc tgacgttgat ccgcgaggcg gccaccccac cgccgccgcc acgccggccg
     1381 accaaaccaa cgcggggctc gaaggagcgc cggctggaag acaaaaccca tcgtgccggg
     1441 gtaaagcttt tgcgcgggcg gccaaccgac tcctagccgc cggcacgcaa ccaaaacgtt
     1501 acgaccgcga taaccgcggc ggcatgcgaa ggaaacgacc atgatcggca gacgccgtac
     1561 tctgcaaggg cttgcggcca caagcctcgc gcgacccgcc ctcgcagcag ggaccaaaac
     1621 actgtcgatc gtgccgcagg cgacgctgaa cagtgtcgac ccgatctgga gtacctcgca
     1681 gatttcccgg aatctcggct tcatggtgtt cgagccgctg tatgggcgtg acgccgacct
     1741 catggcgcga cctctgatgg tcgaggccga tcaaatggag gatggcggca agcgctggac
     1801 catgcggttg cggcccaaaa tgctgttcca cgacgggcag cccgtgcgcg cccaggactg
     1861 tgtggcctca ctgggccggt ggatgaagcg ggacgcggcg ggattggcgc tggcggcccg
     1921 cctggacgcc ctggaggcgg cagatgacca tacgatccta tggcggttgt caaagccgtt
     1981 cccacacctg cgtgcgttgc tttcgaaggt ggtgcagccg gcgctgatga tgccggagcg
     2041 cgtggcgaaa accgacccgt tcaaacagat caccgaggtg gttggcagtg gcccgttccg
     2101 ctggctggcg gatgagcatg tgctggcgag ccacgcggca ttcgctcggt tcgacggcta
     2161 tgtgccgcgc gacgagccac ccagttacat ggccggcggc catcgcgttc tgctggatcg
     2221 ggtcgaatgg aaaatgatcc cggatgccgg aacggcggcc aatgctctga tgaccggcga
     2281 gatcgactgg atcgaaattc cgctgccgga cctgctggcg atgctgcgca aagcgcctgg
     2341 cgtgacgacc ggcgtgttgg acaagtccgg gcagatcatg atgctgcggc cgaaccattt
     2401 gatcgcgccg accaacctga tggcggtgcg gcagacgatg ttggcggcga tcagccaggc
     2461 cgaggtggtc agcgcggtga tgggcgccga tccagcgaac ggcaccaccg gcgtcgggtt
     2521 cctggcaacc ggcaattcca caatcgacga tgccggcctt gatgtcgtcc ggcaacggca
     2581 cacgcgtgac gaactcaggt cgatgctgga acggtcgggt tatgccggtg aaaagctcgt
     2641 gctgttgcat gcgaccgatc acatcttctt caatccgatg ggggcggtga tcgccaatat
     2701 gctgacgcag gccggcctgg cggtggatga tcaggcgatg gactggccga cggtgcaaac
     2761 gcggcgcgtc agtaaggcgc cgttggacaa gggcggctgg tcgatgtttc cgagcctcgt
     2821 tgcggtgacc gaatatcgcg acctgttgct gaccagtttc atgcgtggca acggccgtga
     2881 cggttggttt ggctggccca acgatccgcg catggaagaa attttcgacc actggctggc
     2941 ggcatcggac ccagccgagc agatcagcct ggagcgggac tatgaactgg aagggctcag
     3001 gactctgccg tttattcctc tgggccgctt ccggcagact tccgcgtggc gggacaatct
     3061 gagcggactg ctggacggac cgtcggtggt tttctggaac gtaacgaagg catgaacaag
     3121 gtgtaaatgt tccgcaacgg atgattgagc agttcttcac cgcacagttt cgggcttgta
     3181 attgcaacgc tgcattcaat tgtaaccgtg tattacgcgc tggatggcac gtattcctcc
     3241 gtttgaagca aaagccactt gcgcacaatt gacctaatct tttgcgccgc aaagttgcat
     3301 ttaaggatgg acgggcggga ttacaggaaa ttgtcctcct cgccgcagag gccgccaaaa
     3361 tggtttgggg cccggaaagt aggagatgag ccatgaatat tatcaagacc cttggatttg
     3421 ccgcggtggc cgcgttgtcg ctcggcgttg gcgccgccat ggcgcaagtc gatggcgtgg
     3481 atgccggcgc ggccggtttc ccagccaaca gccccgccat gacggcacca gcagctcgcc
     3541 ctgcagcagt gcagtccggc tcgtctgacg tagacagtgc gcggcccgcg accatgcttc
     3601 cgggcaacta ctacgacgtt ggcaccggcg gctcctctgg cggctaaatc gccgcttccg
     3661 actgcggtgg gaatggccgg cgtgcgcgcc ggcccaattc ctgcggaggg tccaattctt
     3721 ccgaagcggg cgtaaatatc attcgttctc ctgttgccag ggcgatgacc tcaggagcgc
     3781 tcgaacgatc ggtttgacgg gaccgcaatc gacgcacttc cgttatgaga aaatcaatga
     3841 ccacacgtgt gcgtggcgcg aggtggcgcc gcgacgggta aaccaggtaa gccggcaacg
     3901 gctccgattt ataattcggc aatacctgct gcagtcggcc agccagcacg tcgtcgacaa
     3961 tttgatattc cggcaacaag gcaattccga gaccaccaag cgccgcgctg cgaaccgcgg
     4021 catgattgtt ggtactgagc gcgccttgca cggtcacact caccacccca tcccctccga
     4081 tcagccgcca ttccgagtca ttcggcgtga cccgatgcac gatgcaggcg tgatcggtca
     4141 aatcggcggg ttgcagcggc acgccgcggc ggccgagata ctctggcgca gcaaccgcca
     4201 cgcgcgcgat ttctccaaga ctgcgcttga tcag
//
LOCUS       DATAVD010000836         3546 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1380881, whole genome shotgun sequence.
ACCESSION   DATAVD010000836 DATAVD010000000
VERSION     DATAVD010000836.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3546
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1380881"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1526
                     /locus_tag="VHX39_16030"
     CDS             <1..1526
                     /locus_tag="VHX39_16030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3992678.1"
                     /translation="MVPEAAIAMLATARLGAVHSVVFGGFAAAELATRIDDAKPKVIV
                     SASCGLEPGRVVRYKPLLDAAIALSPHKPDACLILQRPQAEATLTPGLDHDFAAAMEA
                     AIPHGCVPVLATDPLYVLYTSGTTGRPKGVVRDNGGHAVVLWNSMRMIYGLDAGDVFW
                     TASDVGWVVGHSYIVYGPLLRGCTSVMYEGKPVGTPDAGAFWRVIAQHKVKVLFTAPT
                     AMRAIKQQDPEGALTRSYDLSSLQALYLAGERCDPPTAVWAHELFGKPIVDHWWQTET
                     GWPITAGFRQFGLFPFKPGSGGRPCPGYDLHALDDEGHVLPPGETGNLSLRLPLPPGC
                     GPTLWQNDEGYRTSYLSDFPGWYRTGDAGVVDTDGDVWVMGRTDDIINVAGHRLSTGS
                     MEEVLASHQDVAECAVIGARDDLKGQAPMGFVVLKAGVNRPEAEVAAELVALVRERIG
                     PVAAFKDARVVARLPKTRSGKILRGSIRRIADGEDAPVPPTIEDPAALDELRALLGG"
     gene            complement(1543..3345)
                     /locus_tag="VHX39_16035"
     CDS             complement(1543..3345)
                     /locus_tag="VHX39_16035"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX3992679.1"
                     /translation="MLRRDMLEKLAGGMALKDAGDFLCLQVEQMTPDIVVSILLVDAE
                     GRLRPLSGPSLPARYCAALDGIKIGPEVGSCGTAAFLGGPVVARDIATDPLWGPYRYL
                     GLPDDLLACWSSPIKRRNGEVAGTFAFYFRERRGPDAWHEQVVNACVHLCMLAIEHSE
                     AKGQIARLLHFDPLTGLPNKARFEQDMADRLPKESRSTAFFFVDLDRFRDINEVHGHS
                     AGDLLLIEAANRLRSFLLHGETAYRFSGDEFLVVLPNTDVPAASRRAQQLLETFAGRI
                     VISGGALVPSVSIGISLFPDDGENAETLLKRAGAALSQVKTDGRGSYRFFSPRMNRIA
                     QDRLMICSALRAALANEALQLHYQPQVVTSTLAPYGVEALMRWTDPVLGQVPPARFIP
                     IAEDLGLINRLGCWSLRHACQQMTEWREAGIVVPAISVNISPLHFCDPQFPDFIAGLL
                     AEFRLPPANLTLEITEGVMIHGEKRARDIILAVREIGVRLSMDDFGTGFSSLSALYDL
                     PISELKIDRSFMRNVDKDSRALALVTTVVRIGQSLGLSVVAEGVETKAQHQVLVDLGC
                     QAAQGYLFSRPLPAPKLVEWISKHGRVPADRPVV"
BASE COUNT          623 a         1088 c         1190 g          645 t
ORIGIN      
        1 ccatggtccc cgaggccgcc atcgccatgc tcgccaccgc tcggttgggc gcggtgcatt
       61 cggtggtgtt cggcgggttc gcggcggcgg aactggccac acgcatcgac gatgccaagc
      121 cgaaggtgat cgtctcggca tcgtgcgggt tggagccggg gcgggtggtg cggtacaagc
      181 ccctgctgga cgccgccatc gcgctgtcgc cgcacaagcc ggatgcgtgc ctgatcctac
      241 agcgtccgca ggccgaggcg acgctgacgc ccggtctcga ccatgatttc gccgctgcga
      301 tggaggcggc gatcccgcat ggctgcgttc cggtgttggc gaccgatccg ctgtatgtgc
      361 tgtatacctc ggggacgacc ggccggccca agggcgtggt gcgcgacaat ggcggccacg
      421 ccgtcgtgct gtggaactcc atgcggatga tctacgggct ggacgcgggc gacgtgttct
      481 ggacggcgtc cgatgtgggg tgggtcgtgg gtcacagcta catcgtctat gggccgctgc
      541 tgcgcggctg cacctcggtg atgtatgagg gcaagccggt gggcacgcct gatgccggcg
      601 cgttctggcg ggtgatcgcg cagcacaagg tgaaggtgtt gttcaccgcc ccgaccgcca
      661 tgcgcgcgat caagcagcag gaccccgagg gtgcgctgac ccgatcgtac gatctgtcgt
      721 cgctgcaggc gctgtatctg gcgggcgagc gctgcgatcc gccgacggcg gtctgggcgc
      781 atgaactgtt cggcaaaccc atcgtcgatc attggtggca gaccgagaca ggatggccga
      841 tcaccgccgg cttccgccag tttggcctgt tcccgttcaa accggggtcc ggcgggcgcc
      901 catgccccgg ctacgacctg cacgcgctgg atgacgaggg ccacgtgctg ccccccggcg
      961 agaccggcaa cctgtcgctg cgcctgccgc tgcctcccgg gtgcggtccg acgctgtggc
     1021 agaacgatga gggctatcgc acgtcctatc tgtccgactt cccgggctgg taccgcacag
     1081 gtgatgccgg ggttgtcgat accgatggcg acgtctgggt gatgggccgc accgatgaca
     1141 tcatcaacgt cgccggccat cgtttgtcca ccggatcgat ggaggaagtc ctcgcctccc
     1201 accaggacgt cgccgaatgc gcggtgatcg gtgcgcggga tgacctgaag ggccaggcgc
     1261 cgatggggtt cgtggtgctg aaagcgggtg tgaaccggcc ggaggcggag gtcgccgccg
     1321 aactggtggc gctggtccgc gaacgcatcg gccctgtggc ggcgttcaag gacgccaggg
     1381 tggtggcgcg gctgcccaag acccgatcgg ggaaaatcct gcgcggcagt atccggcgga
     1441 tcgccgacgg ggaggacgca ccggtgccgc cgacgatcga ggacccggcg gcgctggatg
     1501 aactacgggc gttgctgggc gggtaggatc gaacgcgacc agctatacca cgggccgatc
     1561 ggccggcact cgaccgtgct tggagatcca ctcgaccagc ttgggggccg gtagggggcg
     1621 cgaaaagagg tagccttgcg cggcctggca tccgagatca accagaacct ggtgctgcgc
     1681 cttggtctcc acgccctcgg ccacgacgga taatcccagg ctttggccga ttcttaccac
     1741 cgttgtcacc agcgcaagcg ccctgctgtc cttgtcgaca ttgcgcatga agctgcggtc
     1801 gatcttcagt tcgctgatcg gcaggtcata gagcgctgac aggctggaaa aaccggttcc
     1861 gaagtcatcc atcgacagcc gcaccccgat ctcccggacg gccaggatga tatcgcgggc
     1921 gcgcttctcg ccgtggatca tgacgccttc ggttatttcc agcgtcagat tggccggggg
     1981 cagccgaaat tcagcgagca ggccggcgat aaagtcgggg aactgcgggt cgcaaaaatg
     2041 cagcggcgag atattgaccg agatcgccgg aacgacgatg ccggcctcgc gccattcggt
     2101 catttgctgg caggcgtggc gaagcgacca gcagccgagc ctgttgatca aacctaggtc
     2161 ttctgcgatc ggaatgaatc gagcaggtgg aacctgaccc agcacgggat ccgtccagcg
     2221 catcagggct tccacgccat agggcgccag ggtgcttgtg accacttgcg gttggtaatg
     2281 aagctgcagc gcttcattgg ccagtgctgc tctcaatgcc gaacagatca tcaggcggtc
     2341 ttgggcgatg cggttcatcc gcgggctgaa aaagcgatag cttccgcgtc cgtcggtctt
     2401 gacctgggat aaggctgcgc ccgctcgttt cagcagggtc tccgcgttct ctccgtcgtc
     2461 cgggaacagg ctgatgccga tactgacgga cgggaccaac gccccgcctg atatgacgat
     2521 acggcccgcg aacgtttcaa gtaattgctg ggctcgtctg gacgcggccg ggacgtcggt
     2581 gttgggcagc acgaccagga attcgtcgcc gctgaaccgg taggctgtct ccccgtgcag
     2641 gagaaaggag cgcaggcgat tagcggcttc aatcagcagc agatcgccgg ccgaatgacc
     2701 atgcacttcg ttgatatccc ggaatcgatc cagatcgacg aagaagaagg cggtgcttcg
     2761 cgattctttc ggcaggcggt cggccatgtc ttgctcgaac ctcgccttgt tcggcaagcc
     2821 cgtgagcgga tcgaaatgca gcaatcgtgc gatttggcct ttcgcctcac tgtgttcgat
     2881 tgcaagcata catagatgta cacaggcgtt gacgacttgt tcatgccaag cgtccggccc
     2941 gcgccgctcg cgaaagtaaa atgcgaacgt tcccgcgact tcgccgttgc gccgcttgat
     3001 cggtgacgac caacaggcca gcaggtcatc aggcagccca agataccgat agggccccca
     3061 tagcggatcg gttgcgatat cgcgagcgac caccgggcca ccgaggaagg ccgcggtgcc
     3121 gcaactgccc acctccgggc cgattttgat gccatccagc gcggcacaat agcgggcggg
     3181 caggcttggg ccgctaaggg gacgcaacct gccctccgcg tcaacgagca agatcgatac
     3241 gacgatatcc ggcgtcatct gttcgacctg gaggcagagg aaatcgccgg cgtctttcag
     3301 cgccatgccg ccggcaagtt tttccagcat gtcgcggcgc agcatctcga tctgtctgtt
     3361 cgcggttacg tcgaccagga agacgacgac gttgcggacc aacgcatcgt catcgaggat
     3421 ggggctgacc gtgctggaaa cccatagatt tttgcctttc ttgtcgcggg cgaggagatc
     3481 gatatggaac ccctcggttc cccacagctt ccggtgccag agcgccagcg catcggcatt
     3541 tgtatg
//
LOCUS       DATAVD010000837         6186 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_81574, whole genome shotgun sequence.
ACCESSION   DATAVD010000837 DATAVD010000000
VERSION     DATAVD010000837.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6186
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81574"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(11..991)
                     /locus_tag="VHX39_16040"
     CDS             complement(11..991)
                     /locus_tag="VHX39_16040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3992680.1"
                     /translation="MTVLQPIDRLDIQVLVDNVTDSLSSTPAFVTREWMTLRRQGLRI
                     QAGGSLCCANHGLALVITTHGPSGARTMLFDGGPVDYAVERNGVRLGIDFGAIGAAML
                     SHGHWDHAGGLPRALGMIVQANGGTAVPLYLHPGMFRPRGALQPDGGVLPMQPIPAAS
                     DWALLGAEPVVTAAAQTVLDDRFFVSGEIPRITSYEKGLVGQVSRPSDDAPWEPDPLI
                     MDERFLAVNVRDKGLVVFSACSHAGIVNVLHHAQAQFPGVKLHAVMGGFHLAGPTEAI
                     IPETVRDLGTFGLELIIPAHCTGWRALNALERAYGEKVVVPSAVGKRFSL"
     gene            complement(1010..2041)
                     /locus_tag="VHX39_16045"
     CDS             complement(1010..2041)
                     /locus_tag="VHX39_16045"
                     /inference="COORDINATES: protein motif:HMM:NF028479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-alpha-hydroxyglycine alpha-amidating
                     lyase family protein"
                     /protein_id="HEX3992681.1"
                     /translation="MPRGRLATISILLCLLVAALQPGKTLAQSGGPPSIDLPNPVAPA
                     VSFGQLPPGRALGGTTAVTVGADGKSVWVFERCGAESCADSKLPPILHFDASGKLLTS
                     FGAGMFVFPHGISVDRDGNVWVADADGKNGKGHQVVRFSPTGKVLLTLGHAGMPGDAP
                     GYFNRPTGVAIAANGDIFVADGHGGDSNARVVKFSKSGKFLMAWGKKGSGPGEFDTPH
                     GIALDSHERVYVADRSNNRIQVFDADGKFIADWRQFGRPSGVYVDANDVIYVADSQTT
                     DKAGCTTDPGCRRGIRIGNAADGVVKYFIPRPEGDPVGAEGVTADANGTIYGASNEGK
                     RIVRFNKKS"
     gene            2265..3371
                     /locus_tag="VHX39_16050"
     CDS             2265..3371
                     /locus_tag="VHX39_16050"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEX3992682.1"
                     /translation="MSQFLITEPLEATLAALADALDEADIGILLLDPDLRIRFCNRRL
                     LAVFGLSTALLTRGITFREMLDLTMADSLIALPTDNLTAHHDEREAAVRAGAISPTHI
                     DLKDGTRLLFACKACPDGGRILTYADVSRELRMEELYAMEQINADLRFNNETMAAHAA
                     QLASLAEATDESARKVEDAKRALEREMVERRQLEARLREMATTDGLTGALNRSGFLGL
                     SQNDLDHKPEPDRGMALMMLDVDHFKLINDRYGHAGGDRALKHLVTTLGTRMRRGDLL
                     GRLGGEEFAILLPRIAPAEAERFAGRLVMHVAGSPVLHDGRSIQMTISIGLTMVKATD
                     RSVEHVIARADAALYRAKESGRNRVVKDVAMQAA"
     gene            3451..4263
                     /locus_tag="VHX39_16055"
     CDS             3451..4263
                     /locus_tag="VHX39_16055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992683.1"
                     /translation="MDVSDSPPETAASLETTLDAWETSLARLEQQAALVLRVAKQLRK
                     AAQEGALASVAPAQTALREGVAKLTETIAQDAAPPPIDIPAAFENGSFLAELSQAAAA
                     AGVTLVQRDGRITAYPVVLRLEPRNLGVRIGRKLERRLRPAVLARHLKAIQQRPTRFN
                     ARSFLDRLLRGYTVLAPEWRSGEGPLVSLAALHDVLTLLPAAAADYPMEEFLVDLLRL
                     DREPDARSTRNHRFQLGGSTGTKGAKRLTVFDETGAQHDYYAVRFATDPPNA"
     gene            4256..5212
                     /locus_tag="VHX39_16060"
     CDS             4256..5212
                     /locus_tag="VHX39_16060"
                     /inference="COORDINATES: protein motif:HMM:NF022376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BREX system ATP-binding domain-containing
                     protein"
                     /protein_id="HEX3992684.1"
                     /translation="MLEIRTEPLHPADWLGVIDREYFKDFLHAGGAAAKFVIGDEAAH
                     EEIQSECAVLARRHGLLHAHLSASETKLHMAQELFFALVRVLPWEGLLQRYLEDLFVR
                     HEHPWPRPGTALSTAELAEAFNIAPGIMTRHRDQWLSRDLWDDPRLARDFRAAMIALC
                     LSRLDPQDSSGELNTPVHQWLRGEKPPISSLREFDITAQISRTNARAMLISLCHFLRK
                     AGASGLLLTLDLRAATRRGDAGVRYSPSAVMDLYEVLRELIDDLEHLPGLFILGLADQ
                     SLIAGDRRRTLDTYKALEMRIWPDVRPGDRQNPLAPLVTVAL"
     gene            5209..>6186
                     /locus_tag="VHX39_16065"
     CDS             5209..>6186
                     /locus_tag="VHX39_16065"
                     /inference="COORDINATES: protein motif:HMM:NF022376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BREX system ATP-binding domain-containing
                     protein"
                     /protein_id="HEX3992685.1"
                     /translation="MNLEARIAIEALRAGVPNRAAVRLMGTEEPELEHAFDEQLHHVW
                     TSDRPRPGLGLAGGFGTGKSHFLGYLAEVGRAQNFVVSRVVVSKETPLSDPARVFEAA
                     VRAATLPDRHDDAITGALTILRQSRDRMASLETAVEQAGDALAPIFSALLFLLQRETL
                     PAGFARQMERFLAGGKIRPADVRQALAAVGGARKFDLKLPSVALLMEQRIQFLTALLH
                     AAGYAGWCLLFDEVELIGRYTPLRRALAYAWLATWLGLEGARAWPGIVAAYAITDDFV
                     TAVIDERDDRDRLPDRLKLKERHHEARLATIAMAHIAQTVRAHRLRVPGV"
BASE COUNT         1117 a         1984 c         1947 g         1138 t
ORIGIN      
        1 acagcggagc ttacaaactg aaccgtttcc ccaccgccga cggcaccacg accttttccc
       61 cataggcgcg ctccagcgca ttcaacgccc gccaaccggt gcaatgtgcc ggaatgatca
      121 actccagacc gaacgtgccc agatcacgga cggtttccgg aatgatcgcc tcggtcggtc
      181 cggccaggtg gaaaccgccc atcaccgcat gcaatttcac acccgggaac tgagcttgtg
      241 catgatgcaa gacattgaca atgccggcat gcgaacaggc gctgaacacc actagccctt
      301 tgtcgcgcac attcaccgcg aggaaccgtt cgtccatgat cagcggatcc ggctcccatg
      361 gcgcatcatc ggacgggcgg ctgacctggc cgaccaggcc cttttcgtat gacgtgatgc
      421 gagggatctc cccgctgacg aagaaccggt catccaggac ggtctgtgcc gccgccgtca
      481 caaccggctc ggcgccaagt aaggcccaat ctgacgcggc cgggatgggt tgcatcggca
      541 gcacgccacc gtccggttgc aatgccccgc gtggccggaa cattccgggg tgcaaataca
      601 acggcacggc ggtcccgcca tttgcctgca cgatcatgcc gagtgcgcgc ggcagcccgc
      661 cggcatggtc ccaatgaccg tgcgacaaca tcgccgcgcc gatcgcaccg aaatcgatgc
      721 cgagccgcac gccgttacgc tcgaccgcgt aatccaccgg tccgccgtcg aacagcatgg
      781 tgcgcgcacc ggacggacca tgcgtcgtga tcaccaacgc cagaccgtga ttggcgcagc
      841 acaacgaacc tccggcctgt atccgcagac cctgccggcg cagtgtcatc cattcgcggg
      901 tcacgaacgc cggcgtgctc gacagactgt ccgtcacatt gtcgaccagc acctggatgt
      961 ccagccggtc aatcggttgc agcacggtca tggtgttctc cgccatcggt tacgacttct
     1021 tgttgaaccg cacgatccgc ttgccctcgt tcgaggcgcc gtaaatcgtg ccatttgcgt
     1081 ctgccgtcac accttccgcg ccgaccggat cgccctccgg acgcggaatg aaatacttca
     1141 cgacaccatc cgccgcattg ccgatcctga tcccgcgccg gcaaccggga tcggtcgtgc
     1201 agccggcctt atcggtggtc tgcgagtcgg ccacataaat cacatcattt gcatcgacat
     1261 aaacgccact cggccggccg aactgccgcc agtcggcaat gaatttgccg tctgcgtcga
     1321 acacctgaat ccggttgttc gagcggtcgg cgacataaac ccgctcatgc gagtccagcg
     1381 cgatgccatg cggcgtgtcg aactcacccg gcccgctgcc cttcttgccc cacgccatca
     1441 ggaactttcc gcttttggag aatttgacga cccgcgcatt ggaatcgccg ccatgcccgt
     1501 cagccacgaa aatgtcgcca ttggcagcga tggccacacc ggtgggccgg ttgaagtagc
     1561 ccggcgcgtc gcccggcatg ccggcgtggc ccaacgtcag caggaccttg ccggttggac
     1621 tgaacctgac cacctgatgg cctttgccgt ttttaccgtc ggcatcggcg acccagacgt
     1681 tgccatcgcg gtcgaccgag atcccgtgcg gaaacacaaa catgccggca ccgaaactgg
     1741 tcaacagttt accggatgca tcgaaatgca ggatcggcgg cagcttcgag tcggcgcagc
     1801 tttcggcacc acacctctcg aacacccaaa cgcttttgcc gtcggccccg accgtcaccg
     1861 ccgtcgttcc gcccaaggca cggccgggag gcagttggcc aaaggagaca gcgggcgcga
     1921 ccgggttggg gaggtcaatg ctcggcggac cgccggattg cgccaacgtc ttgcctggct
     1981 gcaaagccgc gaccagcagg cagagcagta tggaaattgt ggcaaggcga ccacgcggca
     2041 tcgtcgtttc cccttttgac cggttcacac ttacgcttgt gtgaccgaac tgtgcggcca
     2101 gggtccggtt ttgtgcaaga ccgccgaggg cgcagcaaaa atcacgccct gaaaattgcc
     2161 tcgcaccgca gcgtggccgt ttaccgatgc ttaacctttg tcgattaccg tgaagtctgg
     2221 tcccggttca aaatgtggat cggagagcga cagagcacgg atcaatgtct caattcctca
     2281 tcaccgagcc ccttgaggct actctggcag ccctggctga tgcgctggat gaggcggata
     2341 tcggcatcct gctgctcgat cccgacctcc gcattcgctt ttgcaaccgc cggctgctgg
     2401 cggtttttgg tctttcgacg gcgctgttga cgcgcggaat aaccttccgc gagatgctgg
     2461 atctgaccat ggcagactcg ctgatcgccc tgccgacgga caatctgacg gcccatcacg
     2521 atgagcgcga ggcggcagtc cgcgccggcg cgatctcgcc gacccacatc gatctgaagg
     2581 acggcacaag attgctgttc gcatgtaaag cctgtccgga tggcggtcgc atactgacct
     2641 atgcggatgt gtcgcgggaa ctgcgcatgg aagagctcta cgccatggag cagatcaatg
     2701 ccgacctgcg cttcaacaac gagaccatgg cggctcatgc ggcgcagttg gcctcgcttg
     2761 ccgaagcgac cgacgaaagc gctcgcaagg tcgaggacgc caaacgggcg ttggaacgcg
     2821 agatggtcga acgccgccaa ctggaggcac ggctgcgtga gatggcgacc accgatggcc
     2881 tcaccggcgc actgaaccgt tcggggttcc tgggattgag ccaaaacgac ctggaccata
     2941 aaccagaacc ggaccgcggt atggcgctga tgatgctcga tgtcgatcac ttcaagttga
     3001 tcaacgaccg ttatggccac gccggaggag accgtgctct gaagcacctg gtcaccacgt
     3061 tgggcacgcg gatgcggcgc ggcgacctgc ttggacgact gggtggcgag gaatttgcca
     3121 tcctgttgcc caggatcgcg ccggcggaag ccgagcgctt cgcggggcgg ttggtgatgc
     3181 atgtcgcggg cagtccggtg ctccatgacg gcaggtcgat ccaaatgacc atcagcatcg
     3241 gactgacgat ggtgaaagcg acggaccggt cggtcgaaca tgtcatcgcc cgggcagatg
     3301 cggcgctgta tcgcgccaag gagagcggac ggaaccgcgt ggtgaaggac gtcgcaatgc
     3361 aggccgcgta acggtctgag cctgggtgca agcccggtgt tgcacgaccg gcattgacgt
     3421 agagccgttc tcacgtttca tagtcacgtc atggacgtgt ccgactcgcc gcctgaaacg
     3481 gctgcatccc ttgaaacgac tctcgacgcc tgggaaacca gcctggctcg cctggagcag
     3541 caggcggcgc tggtcttgcg cgttgccaaa caactgcgca aagccgctca ggagggcgcg
     3601 ctggcttccg tcgcgccagc ccagacggcg ttgcgcgagg gcgtggcgaa gctgaccgag
     3661 acgatcgcgc aggatgctgc gccgccgccg atcgatatcc cggctgcctt tgaaaacggc
     3721 tcgtttctgg ccgaattgtc ccaggctgcc gcggctgcgg gggtcacttt ggtgcagcgg
     3781 gacggccgca tcactgccta tcccgtggtg cttcgcctgg agccgcgcaa tctcggtgtc
     3841 cgcatcggcc ggaagctgga gcggcggttg cggcctgccg tactggcgcg ccacctgaaa
     3901 gcgatccagc agcggccgac ccggttcaac gcgcgatcgt ttctcgaccg gctgctgcgc
     3961 ggctacaccg tgctggcgcc ggagtggcgc tctggtgagg gaccgctggt ctcgctcgct
     4021 gcgttgcacg acgtgctgac cttgctgccg gccgccgcgg ccgattaccc gatggaggag
     4081 ttcctggtcg atttgctgcg tctcgaccgc gaacccgacg cccgttccac ccgcaatcac
     4141 cgctttcaac tgggcggttc caccggcacc aagggcgcca aacggctgac cgtgttcgac
     4201 gagaccggcg cgcaacatga ttactatgcc gtgcgcttcg ccacggaccc gcccaatgct
     4261 tgagattcgc acagaaccgt tgcacccggc cgactggctc ggcgtcatcg atcgcgagta
     4321 cttcaaggat ttcctgcatg ccggtggcgc tgccgcgaaa ttcgtcatcg gcgacgaagc
     4381 ggcacacgag gagatccaaa gcgagtgcgc ggtcctggcg cgccggcatg ggctgctgca
     4441 cgcccacctt tcggccagcg aaacaaagtt gcacatggcc caggaactgt tttttgcact
     4501 ggttcgggtg ctgccgtggg aagggctgct gcaacgttac ctcgaagatc tgtttgtgcg
     4561 gcatgaacat ccctggccgc ggccgggcac ggcactgagc accgccgaac tggctgaggc
     4621 gttcaacatc gcacccggca tcatgacccg gcatcgcgat cagtggctca gccgcgatct
     4681 gtgggacgat cccaggctgg cgcgggattt tcgcgccgcc atgatcgcgt tgtgtttgtc
     4741 gcgcctggat ccgcaggaca gcagcggcga attgaacacc ccggtgcatc aatggctgcg
     4801 cggcgaaaag cctccgattt cgtcgttgcg ggaattcgac attaccgcac agatcagccg
     4861 cacgaatgcg cgggccatgc tgatttcact gtgtcatttc ttgcgtaagg caggtgcgtc
     4921 cgggttgctg ctgacgctgg atttgcgagc agccacgcgc aggggcgatg ccggcgtgcg
     4981 ctattcgccg tctgcggtga tggatttgta cgaagtgctg cgggaactga tcgacgatct
     5041 cgagcatttg ccgggcctgt tcattctggg ccttgccgat cagagcctga ttgccggcga
     5101 ccggcggcgc acgctcgaca cctataaggc gctcgagatg cggatctggc cggacgtgcg
     5161 gccgggcgac cggcaaaacc cgctggcccc gctggtgacg gtggcgttat gaacctggaa
     5221 gcccgcatcg cgatcgaggc gttgcgcgcg ggcgtgccga accgtgctgc cgtgcgcctg
     5281 atgggcaccg aagaaccaga gctcgaacac gcgttcgacg agcaactgca tcatgtctgg
     5341 acctccgatc gcccgcgtcc cggcctgggt ttggccggcg gtttcggcac cggcaaatcg
     5401 catttccttg gttacctcgc cgaggtcggc cgcgcccaga atttcgtcgt cagccgcgtg
     5461 gtggtcagca aggaaactcc gctgtccgat ccggcacggg tgttcgaggc ggcggtgcgc
     5521 gcggcaacgt tacctgaccg tcatgacgat gcgatcaccg gcgcgctgac cattctgcgc
     5581 caatcgcgcg acaggatggc gtctctggaa accgcggtcg agcaggcggg tgacgctctg
     5641 gcgccgatct tttccgcgct gctgttcttg ttgcagcggg agacgctgcc ggccggcttc
     5701 gcgcgtcaga tggaacgatt tctggcgggc ggcaaaatcc ggccggccga tgtgcggcag
     5761 gcgcttgccg cggtcggcgg ggcccggaag ttcgacctga agctgccctc ggttgcgctg
     5821 ctgatggaac aacggatcca gtttctgact gcactgttgc atgcagccgg gtacgccggt
     5881 tggtgcctgt tgttcgatga ggtcgaactg atcggccgtt atacgccgct gcgccgcgct
     5941 ttggcgtacg cctggctggc cacgtggctt ggtctcgaag gtgcacgcgc atggcccggg
     6001 attgtcgccg cctatgccat taccgatgat ttcgtaaccg cagtgatcga cgaacgcgac
     6061 gacagggatc ggcttcccga ccggctgaaa ctgaaggagc ggcatcatga ggcgcggttg
     6121 gcaaccattg cgatggcgca tattgcgcag accgtgcgcg ctcatcgctt gcgcgtgccg
     6181 ggggtc
//
LOCUS       DATAVD010000838         3000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2871836, whole genome shotgun sequence.
ACCESSION   DATAVD010000838 DATAVD010000000
VERSION     DATAVD010000838.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3000
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2871836"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1048
                     /locus_tag="VHX39_16070"
     CDS             <1..1048
                     /locus_tag="VHX39_16070"
                     /inference="COORDINATES: protein motif:HMM:NF042789.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HEX3992686.1"
                     /translation="QARVGLGDLREEHISRQGFFGPVAMIYREHGPNEIVRVEGSLLP
                     RRVADTTRVEPTDQVDPRGAPEVMLSNADVSVAISRRTAAMPYAYRDLDGDLLYFVHK
                     GTGIFATEFGRLPYEPGDYVLIPKAITFSVMPEPGESHMLVVESPAPLELTEHKQTGR
                     HMPVDPTVLVLPDLCDYGFPRADEYELRVKHGGGHSSIFYRNNPLVSVGWKGDLFPYK
                     LNIRDIIPISSDRIHIAPSAWCTFQAAGFAVISFVPQIAVADPNAEELPSYHRNVDND
                     ESVFVHHDAGSARQPATLSHVPQGILHGADEAARAAFNARRVPGMRRTLCGVSVDTDR
                     PLVASPAFERVSGG"
     gene            complement(1147..2262)
                     /locus_tag="VHX39_16075"
     CDS             complement(1147..2262)
                     /locus_tag="VHX39_16075"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEX3992687.1"
                     /translation="MTARTAPPFRADHVGSLLRPKELQTARAAWKAGNLPHDALRDVE
                     NRCIAAAIAQQEAIGLRAATDGEYRRAYWHFDFVAGLEGVELYVPEQKVQFKGGATIG
                     HSLRVNGRIGFSKPIMLNDYEFVASHVHTAMAKQTIPSPSVVHFRGGRNAIDQTSYPT
                     LDSFFGDLGEAYNKAVASFGAAGCKYLQIDEVNIAYLCDPEQIAALKARGEHVDNLLQ
                     IYGAMLNRAIEARPPGMTISMHLCRGNFRSTFVATGGYEPVAEVLFNQINADAYFMEY
                     DSDRAGGFEPLRFVPRGPKIVVLGLVTSKTGALESKDELKHRIDEAAKYLPLEQLALS
                     PQCGFASTEEGNTLTEDEQWAKLRLCVEVAREVWGGV"
     gene            complement(2436..>3000)
                     /locus_tag="VHX39_16080"
     CDS             complement(2436..>3000)
                     /locus_tag="VHX39_16080"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3992688.1"
                     /translation="YTTNPLPDIVTMNHAHPSHYTLQPNPRIGTVLHGWQEGPKPPAH
                     DVVLGDLRVTNLATNIRDWGGGTEINGNSIFIFETARLCIAHLGHLQHLLEPADLDAL
                     GHIDIVMIGVDGGYTIGQADARTVVEQIHPRLVLPMHYFTVENLTRFLDMMRGAYAID
                     VRHDPMIEVSRTTLPDRPTVIALPGGP"
BASE COUNT          570 a          883 c          942 g          605 t
ORIGIN      
        1 tcaggcgcgc gtcggtctcg gcgatttgcg cgaggaacat atcagccggc aaggcttctt
       61 cggcccggtt gcgatgatct atcgcgagca cggcccgaat gagattgtcc gggtcgaggg
      121 ctcgttgctg ccgcgccggg tcgccgacac gacgcgagtt gagccgaccg accaggtcga
      181 tccgcgcggc gcgccggaag tgatgctgtc caacgccgac gtcagtgtcg ccatcagccg
      241 gcgcaccgcg gccatgccat atgcctaccg cgatctggac ggcgatttgt tgtatttcgt
      301 gcacaagggc accggcatat ttgccaccga gttcggccgt ctgccgtacg aaccgggcga
      361 ttacgtgctg atcccgaaag ccatcacgtt cagcgtgatg cccgagccgg gtgagagcca
      421 tatgctggtg gttgagtcgc cggcgccgct ggagctgacg gaacacaaac aaaccggccg
      481 gcacatgccg gtcgatccca cggtgctggt gctgccggac ctgtgcgact acgggtttcc
      541 tcgcgccgat gaatatgagc tgcgggtgaa gcatggcggc ggccacagct cgattttcta
      601 tcgcaataat ccgctggtgt cggttggttg gaagggcgat ctgtttccct acaagctgaa
      661 catccgcgac atcatcccga tcagttccga ccgcattcat attgctccgt cggcgtggtg
      721 cacgttccag gcggctggtt tcgcggtcat atcgttcgtg ccgcaaatcg ctgttgccga
      781 cccgaacgcc gaggaactgc cgtcctatca ccgcaacgtc gacaatgacg aaagcgtgtt
      841 cgtgcatcac gatgccggca gtgcgcggca accggcgaca ttgtcacacg tgcctcaggg
      901 catcttgcac ggcgctgatg aagccgcacg tgcggcgttc aacgctcggc gcgtgcccgg
      961 catgcggcgg acgctgtgcg gcgtcagcgt ggataccgac cggccgttgg ttgcgtcgcc
     1021 ggcgtttgag cgcgtgagcg gcgggtgatg gcggaggtgt aggaaggcac cggaggcact
     1081 gcttaggcag agcctcctgg tcggggtccg ggcagaatcc ccggcgaatt gccgcaccct
     1141 aggccgtcac acgccgcccc acacctcgcg tgcaacctcg acgcagaggc gcagttttgc
     1201 ccattgttcg tcctcggtca gcgtgttgcc ttcttcagtc gaggcgaagc cgcattgcgg
     1261 tgacagtgcg agctgctcca atggcagata tttcgccgcc tcatcgatcc ggtgtttcag
     1321 ttcatctttg gattcgagtg cgccggtttt gctggtgacc agtccgagga caacgatttt
     1381 cggacctcgc ggcacgaagc gcagcggttc gaaaccgccg gcccggtcgg aatcgtattc
     1441 catgaagtag gcatcggcgt tgatctggtt gaacagcacc tcggcaaccg gttcgtaccc
     1501 acctgtcgct acaaacgtgg atcggaaatt accgcggcac agatgcatgg agatggtcat
     1561 gcctggaggc cgcgcttcga tcgcccggtt cagcatggcg ccataaattt gcagcagatt
     1621 gtcgacatgt tcgccgcggg ctttcagcgc ggcgatttgt tcggggtcgc acagataagc
     1681 aatgttgacc tcatcgatct gcaaatactt gcatccggcg gcaccgaacg atgcaacggc
     1741 tttgttgtag gcttcaccta ggtcgccaaa gaagctgtcc aatgtgggat acgatgtttg
     1801 gtcgatcgca ttgcgtccac cgcggaaatg cacgaccgac ggagacggga tggtttgttt
     1861 cgccatcgcc gtgtgaacgt gcgaggcaac gaattcgtaa tcgttcagca tgatcggttt
     1921 gctgaaaccg atgcggccgt tgacgcgcag cgaatggccg atggtggcgc cgcccttgaa
     1981 ctggactttc tgctcgggca cgtagagttc gacgccctca agaccggcga cgaaatcgaa
     2041 gtgccaatag gcgcggcgat actcgccatc ggtagcagcg cgcagaccga tcgcctcctg
     2101 ctgcgcgatc gcggcggcta tgcaacgatt ctcgacgtcg cgcaacgcat catggggcag
     2161 gtttcccgcc ttccaggcgg cacgtgcggt ctgcaattct ttaggccgca gcaaactccc
     2221 gacatgatcg gcacggaacg gtggggcggt gcgagcggtc atggtccggt ttccttcttt
     2281 tgcagtgagc ggcgtaagct acgatccggt gttggacggc caaggatcgc cttgatccaa
     2341 acgttgccaa accgccgcgc agcgatatcg gaccgcagtg gtctgatcgc atatccggca
     2401 tcgtccggcc agaacggcgt cgccaggccg ccggatcacg gtccacctgg caacgcgatg
     2461 acggtgggac ggtcgggtaa agtggtgcga gagacctcaa tcattggatc atgccggaca
     2521 tcgatcgcgt aggccccgcg catcatgtcc aggaaccgcg ttaggttttc caccgtaaaa
     2581 taatgcatcg gcaggacgag acgcgggtga atttgctcga cgaccgtgcg agcatcggcc
     2641 tggccgatcg tgtagccgcc gtcgacccca atcatcacaa tatcgatatg gccgagtgca
     2701 tcgagatcag ccggctccag caaatgctgc aaatgaccga gatgagcaat gcacagtctc
     2761 gcggtttcga aaataaaaat cgaattgccg ttgatctccg taccgccgcc ccagtcgcga
     2821 atatttgttg ccaggttggt gacacgcaga tcacccaata caacatcatg ggcaggcggc
     2881 ttcggtccct cctgccagcc gtgcagcacg gtgccaatcc gcgggttggg ttgcagggtg
     2941 tagtgcgacg gatgcgcgtg gttcatcgta acaatgtcgg gcagcggatt cgtagtgtag
//
LOCUS       DATAVD010000839         1502 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3241912, whole genome shotgun sequence.
ACCESSION   DATAVD010000839 DATAVD010000000
VERSION     DATAVD010000839.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3241912"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..226
                     /locus_tag="VHX39_16085"
     CDS             <1..226
                     /locus_tag="VHX39_16085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992689.1"
                     /translation="PCRNGHGLTYGHFAFLSRYDGTGPRLVLSEALHETEERGHTHSA
                     WLQCEMTTLDCMQAVCHDDRHVEPDPHHAN"
     gene            293..553
                     /locus_tag="VHX39_16090"
     CDS             293..553
                     /locus_tag="VHX39_16090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992690.1"
                     /translation="MSVHVRFLLDAECSPGLLPRMLMPFAKRDLVPDRMWSHRSGDMM
                     HVEIAVEAMPDEDVHLVEGNLRQIIGVHQVLQIRPEARRAAA"
     gene            734..1276
                     /locus_tag="VHX39_16095"
     CDS             734..1276
                     /locus_tag="VHX39_16095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992691.1"
                     /translation="MPDSLCLSLRIFDHEPVRTPNAQLWKGGATDLTTRTMFADPPHW
                     LMIVDHPKDQPPPTPERKPLRNWAMQQINPGQLSSPDHAGGVILVSMNIEPPYEEEFN
                     DWYNTEHIPHFNRLDGVITARRFRALEGNPRYVALYHVINTDIYATPGWMAANQTPWM
                     LRMRRYQRDRTYFMFRERIA"
     gene            1294..>1502
                     /locus_tag="VHX39_16100"
     CDS             1294..>1502
                     /locus_tag="VHX39_16100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992692.1"
                     /translation="MSQSAPLTPEIIGRAIDNTPLNNALKFIIGVAAAGFLFDSFDIT
                     IVGYALPKIRQEFALSPTQVGLVGSS"
BASE COUNT          300 a          482 c          409 g          311 t
ORIGIN      
        1 accgtgccgc aatgggcatg gtttgactta tggacatttt gcgttcctct cccgttacga
       61 cgggaccggc ccgcgtctgg tgttgtccga ggctttgcat gaaaccgagg aacgcggcca
      121 cacgcacagc gcctggctgc aatgcgaaat gacaacgctg gactgtatgc aggccgtatg
      181 ccatgatgat cgtcatgtcg aacctgatcc acatcacgcg aattagcggc ccggctgtct
      241 gaacagccgg ggttacccgt tatttccctt cgtgatctgg agtttcgacc caatgtccgt
      301 ccatgtgcgc tttttgctcg acgccgagtg ttcgcctggc ctgttgcctc gcatgctgat
      361 gcctttcgcc aaacgcgatc tggttcccga ccgcatgtgg tcgcaccggt cgggcgacat
      421 gatgcatgtc gagatcgccg ttgaagccat gccggatgag gacgttcacc tggtcgaagg
      481 caacctgcgc caaatcatcg gcgtgcatca ggtgctgcag atccggcctg aggcgcgtcg
      541 ggctgccgcc tgagccacgt atccgactgg caaatcatcg ggacgcattc gaccgaatat
      601 tgatcgatac accgttcgtt gccaacgcgc atccattgcc gcctgcccgc tcccgcttgc
      661 accgtccgat cgcctgggcc aacctcagag tcagaaaccg tgcgccgttc aggtgcctgg
      721 aggaaaccgg tccgtgccag actctctctg cctcagtttg cggattttcg atcacgagcc
      781 ggttcgcacg ccgaacgccc aactttggaa gggcggcgcg accgacctga caacgcggac
      841 aatgtttgcc gatccgccgc actggctgat gatcgttgac catcccaagg atcagccgcc
      901 gcccactccc gaacgcaagc cgttgcgtaa ctgggccatg cagcaaatca atccagggca
      961 actgagttct cccgatcatg ccggcggcgt gatcctggta tcgatgaaca tcgaacctcc
     1021 gtatgaagaa gaattcaacg actggtacaa caccgaacac attccacact tcaatcgcct
     1081 ggacggtgtc atcaccgccc gacggtttcg cgcgctcgag ggtaacccgc gatacgtcgc
     1141 cctgtatcac gtgataaata ccgacattta tgcaacgccg ggctggatgg ccgccaacca
     1201 gacgccctgg atgctgcgca tgcggcgata tcagcgcgac cgcacctatt tcatgttccg
     1261 cgagcgtatc gcctgacccc ggaaggaagc accgtgtcac aatccgcgcc tctgacgccc
     1321 gaaatcatcg ggcgagcaat cgacaacacg ccattgaaca acgcgctgaa attcatcatc
     1381 ggcgtggcgg cagccggctt tctgttcgac tccttcgaca tcaccatcgt cggttacgcg
     1441 ctgccgaaaa tccgccagga gtttgctttg tcgccgacac aggttggcct tgtcggatcc
     1501 tc
//
LOCUS       DATAVD010000840         1706 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3241928, whole genome shotgun sequence.
ACCESSION   DATAVD010000840 DATAVD010000000
VERSION     DATAVD010000840.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3241928"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            303..737
                     /locus_tag="VHX39_16105"
     CDS             303..737
                     /locus_tag="VHX39_16105"
                     /inference="COORDINATES: protein motif:HMM:NF022227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0044781 - bacterial-type flagellum
                     organization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliX"
                     /protein_id="HEX3992693.1"
                     /translation="MVEGVRASGLGAAAPLPRDSTKTLAGQFTVDEGAAPLHQQARLA
                     SVAGIGLESMLALQAVDEAAERNRAAHKRGTAMIVALARLQRAMLAEEDPSLALNALH
                     ELAGDVPIANDPALGAIVRAVVLRSRVEIARREQSLSRQHAG"
     gene            904..1320
                     /gene="dksA"
                     /locus_tag="VHX39_16110"
     CDS             904..1320
                     /gene="dksA"
                     /locus_tag="VHX39_16110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HEX3992694.1"
                     /translation="MLITLPPDYRPSEDEEFMNPLQAEYFRQKLLRWRGELLKEADGT
                     LLSLSQGGILEPDITDRASVETDRALELRTRDRARKLISKIDQALGRIENGSYGYCEE
                     TDEPIGIRRLEARPIATMSIEAQERHERMERVHRDD"
     gene            1353..>1706
                     /locus_tag="VHX39_16115"
     CDS             1353..>1706
                     /locus_tag="VHX39_16115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HEX3992695.1"
                     /translation="MAVVPAPVVSVERLIWRDGRVTPESRTIPEETPIALTYGRSTFA
                     VMMATPADLKDFAFGFSLSEGIVQRPAEIAALDVVPVADGIELRMDLAEERQSSLARR
                     QRRITGPGGCGLCGMD"
BASE COUNT          324 a          488 c          573 g          321 t
ORIGIN      
        1 cacgccttcg acatcggcga tatccttgat gcggacctgg ccgattgccg gctgccctgc
       61 caccagcgaa aacgccagca atatccgaac aatggtaaag atttgccgac ccagtgccac
      121 gtcatggcct tcccggtaag aacttcgaaa ccattggacg tcatattccg ccggccgatc
      181 catcggggtg aaaaacgcaa ggcccgtgcc aggcagaatg cacggaattc cggtggtatc
      241 agcaagttac cgcgaggcag gttttgccgc tcggcacgaa tgacctggtt ggagtagcga
      301 gcatggtcga aggtgtgagg gcgagcggtc tcggcgcagc ggcgccgttg cctcgtgaca
      361 gcacgaaaac gttagcgggc cagttcacgg tggacgaggg cgccgcgccg ctgcatcagc
      421 aggcgcggct ggcttcggtg gcgggcatcg ggcttgaaag catgctggca ctgcaggcgg
      481 tcgatgaggc ggcggaacgc aaccgggctg cacacaaacg tgggaccgcg atgatcgttg
      541 cgttggccag gctgcagcgt gcgatgctgg cagaggagga tccgtcgttg gcgctcaacg
      601 ctctgcacga actggccggc gacgttccga tcgccaatga tccggcactc ggcgcgattg
      661 tgcgggcggt ggtgttgcgc tcgcgcgtcg agattgcccg ccgggaacag agtctgtcgc
      721 ggcagcacgc cggctgatgc aaaaaagcga cgtttcatta cggatatttg acggcttgcg
      781 atgcctcttg gcgttgccag gggccatcgc tataagcccg cccatccggg tcgtgtgctg
      841 cgagggccgg acgccgtcgc tcacctgttt gcggcggaaa cataataaac aggaccggcg
      901 ccgatgctga ttacgttgcc tccagattac cggccctccg aggacgagga attcatgaat
      961 cctctccagg cggaatattt caggcagaag ctattgcggt ggcgtggcga gttgctcaag
     1021 gaggctgatg gtactttgct cagcctgtcg caaggcggca tcctggagcc cgacattacc
     1081 gaccgtgcca gtgtcgaaac cgaccgggcg ctggaactgc gcacccgtga ccgcgctcgc
     1141 aaattgatat ccaagatcga ccaggctttg ggacggatcg aaaacggcag ttatggttac
     1201 tgcgaggaaa ctgatgagcc gatcggtatc cgccgactcg aggcgcgtcc gatcgcgacc
     1261 atgtcgatcg aagcccagga gaggcatgag cggatggagc gggtgcaccg cgacgattga
     1321 cgtccgctgc gggccggcgc aggtgttcgg ttatggcggt agttcctgct cctgtagttt
     1381 cggttgagcg tctgatctgg cgtgacggca gggtgacgcc ggagtcgcgg accattccag
     1441 aagaaacccc gatcgcgttg acctacggcc gctccacctt tgcggtcatg atggcgacgc
     1501 cggccgatct caaggatttt gccttcgggt tcagcctatc cgagggcatc gtgcagcgcc
     1561 ctgcggagat cgccgcactg gatgtcgtcc cggttgccga tggtatcgag ttgcgtatgg
     1621 atctggcaga ggagcggcaa tccagcctgg cccggcggca gcgtcgcatc accggcccgg
     1681 gtggatgtgg actttgcgga atggac
//
LOCUS       DATAVD010000841         2746 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2126532, whole genome shotgun sequence.
ACCESSION   DATAVD010000841 DATAVD010000000
VERSION     DATAVD010000841.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2126532"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..682
                     /locus_tag="VHX39_16120"
     CDS             <1..682
                     /locus_tag="VHX39_16120"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3992696.1"
                     /translation="AQEGFFVVLTTRTDANAAPLAHAIREQGGDCMVVELDLVSQESI
                     ASAFNIIRREAGDPEVLVYNAGYLEGRDLPPEKELLEHIPVEMLDTALHIAARGPFLI
                     AKEVLPSMRQKGRGSFLISNNSSSLRGRKRMTGQSLYYPRGMMRTLAQVLTEEYSEHG
                     VHVANVVIDGTIDSPGTRAMPRNQNRPDLIINPEKIAEAFWYLHTQDRSCWTHEIQLT
                     PFPVKPSY"
     gene            740..1156
                     /locus_tag="VHX39_16125"
     CDS             740..1156
                     /locus_tag="VHX39_16125"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX3992697.1"
                     /translation="MALKIERFQPEGMNVRMSGGKPSYSHAVTISGTGKLVYIAGQLA
                     RDIDGNCVGKGDMRAQMEQTFQNLDRCLKAAGATWADVVKTNTFVTDFDEFQKCGDVR
                     MRYFGVATPTSTTVGVTRLAGPDFMVEIEAVAVVNG"
     gene            complement(1218..1703)
                     /locus_tag="VHX39_16130"
     CDS             complement(1218..1703)
                     /locus_tag="VHX39_16130"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3992698.1"
                     /translation="MLAGGRHVQATDILVVDLTRYSLASSVTVSQREEELNMKVVTLK
                     NVPDVPVEGADRIEGWTGPVSRSRQTIIESGDSDNYNCSVVNFSQGCTTGWHTHTCDQ
                     ILVVTSGSGMVATEHEKREINVGDVVHIKAGERHWHGAKANTTMGHITITAVGGQAKW
                     G"
     gene            complement(1809..2438)
                     /locus_tag="VHX39_16135"
     CDS             complement(1809..2438)
                     /locus_tag="VHX39_16135"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3992699.1"
                     /translation="MESLQYRVDEIEAAVEEATRCGTYLCAHAYSPEAIERAVRAGVR
                     TIEHGNLIDVATAALMAEWGAFLVPTLATYDAMRRRGRDYGLSDYGLAKNEVVLETGM
                     RSLEIARNGGVKIGFGSDLLGRLQNDHCGEFLLRADAMSAPEVIRSATLVNAEIVRQT
                     GKLGELVPGAFADLLVVDDNPYKDLAVFRNDGGRLDGIMVDGRFVRNRL"
     gene            2483..>2746
                     /locus_tag="VHX39_16140"
     CDS             2483..>2746
                     /locus_tag="VHX39_16140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992700.1"
                     /translation="MVGTFAQFISRRLDHIRYAVGDPRSPGQSRTAGAEGLGLRPLPE
                     IAMVAGLTKRLTGNEQPRTYEKSLFDRRLEVPIGASGIAQSGEA"
BASE COUNT          539 a          867 c          782 g          558 t
ORIGIN      
        1 tgcgcaagag ggcttcttcg ttgtcctgac aacccgtacc gacgccaatg ccgcgccgct
       61 cgcgcatgcc attcgcgaac agggtggcga ctgcatggtc gtcgaactgg atctggtctc
      121 gcaggaatcc atcgcctcag cgttcaacat tatccgtcgc gaggccggcg atcctgaagt
      181 tctggtctat aacgcgggtt acctggaagg ccgcgatctg ccgccggaga aggagttgct
      241 cgaacacatc ccggtggaaa tgctcgatac tgcactgcac attgccgccc gtggaccgtt
      301 tctgatcgcc aaggaagtgc tgccgtcgat gcggcagaaa ggccgtgggt cgtttttgat
      361 ttctaacaac tccagctcgt tgcgcggtcg caagcggatg accgggcagt cgctgtatta
      421 cccgagaggc atgatgcgca ccttggcgca ggtgctcacc gaggaatatt ccgagcatgg
      481 ggttcacgtt gccaatgtgg tgatcgacgg caccatcgac tcgccaggta cgagggcgat
      541 gcctaggaac cagaaccggc ccgaccttat catcaatccg gagaagatcg cagaggcatt
      601 ctggtatttg cacacgcagg accggtcgtg ctggacccac gaaatccagc tcacgccatt
      661 cccggtcaag ccgagctatt gatacctgat cacggcgacc acgtcggtca agcaacgaac
      721 ccaatcagga gaatgcgaaa tggctctgaa gattgagcgg tttcagcccg agggaatgaa
      781 cgtcaggatg tccggcggga agccgtccta ttcccacgcg gtgacaatca gcggcacagg
      841 caagctcgtc tatattgccg gtcagttggc tcgcgacatc gatggcaatt gtgtcggcaa
      901 aggcgacatg cgcgcgcaga tggaacagac cttccagaac ctcgaccgct gcctcaaggc
      961 agccggtgcg acctgggccg acgttgtcaa gaccaacacc ttcgttaccg atttcgacga
     1021 gttccagaag tgcggcgatg tgcgcatgcg ttatttcggc gtggcgacgc caaccagcac
     1081 gacagtcggc gtcactcggc tcgccggtcc ggacttcatg gtggagatcg aggcagtggc
     1141 tgttgtgaac ggttgaacgc gactgttgct ggcgcccatc gttcgggcgt cagcaacggt
     1201 attgcgctgc gttcggctta accccacttt gcctgcccgc cgaccgcggt gatggtgatg
     1261 tgacccattg tcgtgttggc tttggcgccg tgccagtggc gctcgccagc cttgatatgc
     1321 acgacgtcgc cgacgttgat ttcgcgcttt tcgtgctcgg ttgccaccat gccggaaccg
     1381 gaggtcacaa ccagaatctg gtcgcaggta tgcgtgtgcc agccggtggt gcatccctgg
     1441 ctgaagttca ccacgctgca gttgtaattg tctgaatcgc cggactcgat aatggtttgc
     1501 cgcgaccgag agaccggccc ggtccaacct tcgatccgat cggcaccttc tacggggaca
     1561 tcgggtacgt ttttcagggt aactactttc atattgagtt cctcctcgcg ttgacttact
     1621 gttacggaac ttgccaagct gtatcgggtg agatcaacca ccaggatatc ggttgcctgg
     1681 acgtgtctgc cgccggcgag catacgacct gccgcgggac cttgccagat cacctctttc
     1741 ccatgatccg ggccgtgacg agcaacgcaa cccgcaatgg actattggca gcgtgacttc
     1801 ggagatgttc aaagccgatt tcgcacgaac ctcccatcca ccatgatccc atccagtcgg
     1861 ccgccgtcgt tccggaacac cgcgagatcc ttgtaaggat tatcatccac caccagcaga
     1921 tcagcgaacg ctcctggcac cagttcgcca agcttcccgg tctggcgcac gatctctgcg
     1981 ttcacaagcg tcgctgaccg gatcacctcc ggcgcgctca tcgcgtccgc ccgcagcaag
     2041 aattcaccgc agtgatcgtt ctgcagccgc cccaacagat cgctgccgaa accaatcttt
     2101 acgccgccat tgcgggcaat ttccaaggac cgcatgccgg tttccaacac cacctcgttc
     2161 ttcgccaggc cgtagtccga cagtccgtaa tcccggccgc gccgtcgcat tgcgtcgtac
     2221 gtagccaatg tcggcaccag aaacgccccc cattccgcca tcagcgcggc cgttgccaca
     2281 tcgatcagat tgccatgttc gatggtccgc actccagcgc gcaccgcgcg ctcgatcgcc
     2341 tcgggactgt acgcatgcgc gcaaagatag gtaccgcagc gggtggcttc ctcgaccgct
     2401 gcctcgatct catcgacccg gtattgcaga ctctccagcg ggtcggctgc gaggcgaccc
     2461 catcggacac catcagcttg atatggtcgg cacctttgcg cagttcatct cgcgccgcct
     2521 tgatcacatc cggtacgccg tcggcgaccc gcgaagccca ggtcaatccc gaacagcagg
     2581 cgcagaaggt ttgggtttgc gtccgcttcc ggagatcgcc atggtcgccg gtttgactaa
     2641 gcggctgacc ggcaatgaac aaccgaggac ctacgaaaag tccctgttcg accgccgcct
     2701 tgaggtccca atcggcgcct ccggtatcgc gcaaagtggt gaagcc
//
LOCUS       DATAVD010000842         7570 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_827097, whole genome shotgun sequence.
ACCESSION   DATAVD010000842 DATAVD010000000
VERSION     DATAVD010000842.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7570
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_827097"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(133..1041)
                     /locus_tag="VHX39_16145"
     CDS             complement(133..1041)
                     /locus_tag="VHX39_16145"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3992701.1"
                     /translation="MSDITALLDGIETIAHPGRWSRMGRVLRNFARRSPMSAFWGCIA
                     ALIIVIAVAAPALPLYPPLKSDFRAMTKPPSERHYFGTDQIGRDALSRVVFGSRASLT
                     IAVSAVVLGTTFGAFWGLACGYFGGRFDLISQRLMEFLQSFPDLILAMAIAMALGAGF
                     GTVIVAIAITRIPFGGRVIRSVVLSLKELSYVEAARGLGASHARVMLRHILPQCVAPY
                     LILATTHLGVAIIIEAALGFLGAGIPPPTPTWGNMLADSLNAGLVPPWWLVLFPGAAI
                     TLTVLAFNLLGDGIRDALDPRLRGSI"
     gene            complement(1038..1994)
                     /locus_tag="VHX39_16150"
     CDS             complement(1038..1994)
                     /locus_tag="VHX39_16150"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3992702.1"
                     /translation="MYSYILRRLAYGVLTVFGVSVVVFVVMRVLPGDPLVALFGPEGY
                     TKLTAAERASFMAQLGLSDPLIVQYWHWMRDIASGSFGHSFFRSESVAEMLLRRGPLT
                     AEIALLSVILSWIVGIPVAIVSALRPNSWGDNIARFLSILFLAVPGFWVGMLIILAML
                     FWFGYRPPLTNVSLLDNPWENLQVVIGPAFVLGMGQAAYIARMARSALLEVIREDYVR
                     TARAKGLSGRLVVALHALPNALLPVITLSGILIGFVLAGSIPVERAFATPGLGFAMYS
                     AVSERDVFVMQNLVFVYAVVFVMINIVIDLTIAWLDPRIRYQ"
     gene            complement(2007..2297)
                     /locus_tag="VHX39_16155"
     CDS             complement(2007..2297)
                     /locus_tag="VHX39_16155"
                     /inference="COORDINATES: protein motif:HMM:NF018717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEX3992703.1"
                     /translation="MAKAYWVATYRSISNPDALAEYAKLAGPSIMAGGGRFLVRGTPA
                     KTYEAGLAQRTVVIEFDSVAAAIAAHDSAGYQAALKALGNGAERDIRILEGA"
     gene            complement(2302..3648)
                     /locus_tag="VHX39_16160"
     CDS             complement(2302..3648)
                     /locus_tag="VHX39_16160"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992704.1"
                     /translation="MSLTTNAESGGLSWIKDVTRYQWMVFLVAWLGWMLDATDFGLFN
                     LVLRPALTELLGGNPTIAQIGQAGGFLSMAGLLGWALGGFGFGIIGDYIGRIRTLILS
                     VVLVAVFTGLQGLATNTWVLGFFRFFAGVGTGAEIVVGIPLVAEAFATEQRAKVLGIM
                     MTGAAFGNLVAGQIFAYIGPYGWRYVMYAGIVPALALLLLRRGMEEPERFKDVQERRR
                     TLKAARSLSAADEKFLAFAPKQLFTRELRYSTFIGILFCLGTLLAIWTSQIWLPTIQT
                     QLLQKAGITGAASAPYVGNGMTLWGIGGIFGYATFGFIADAVGRRPAVIFYNVGTIVS
                     GLYLFLGVQSWDLYPYLLPVFGYFVFGVFSGHAVYLPELFPTQVRATAVSFCNGTGRV
                     ITSFGPLFAGLITPLLGGQFSTATAIMTCFAGLSILAMLLGKETRGEDLPHLTVKG"
     gene            complement(3716..4270)
                     /locus_tag="VHX39_16165"
     CDS             complement(3716..4270)
                     /locus_tag="VHX39_16165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012569230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="demethoxyubiquinone hydroxylase family protein"
                     /protein_id="HEX3992705.1"
                     /translation="MTNHPPARPLPGDLPTDTAVHRMIRVDHAGEYGAARIYAGQLAV
                     LGRSASADQLRHMRDQEQVHLDTFNAVLADRHVRPSALLPFWHLAGFALGAATAALGQ
                     RAAMACTVAVEETIDAHYTAQIDRLPGSEAALRDTLTEFRAEEREHRDIALANDAEQA
                     PGYRLLSAAIRTGCRIAIRLSERL"
     gene            complement(4333..4845)
                     /locus_tag="VHX39_16170"
     CDS             complement(4333..4845)
                     /locus_tag="VHX39_16170"
                     /inference="COORDINATES: protein motif:HMM:NF014639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEX3992706.1"
                     /translation="MAAMLASPILSHRTCGLIAAIASAIALGIAIASERWGGLVPCAL
                     CLLERWPYRIAIILGLAAALLPAQYARVALGLLALTMLGGAALGVIHVGVEFHLWPSP
                     LPECAAPVSRGGSVAELLANMPATPSKPCDDPAYLVPGLKLSMAEMNLLFAAAFALVA
                     GWIASRRPMS"
     gene            4923..5561
                     /locus_tag="VHX39_16175"
     CDS             4923..5561
                     /locus_tag="VHX39_16175"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043295 - glutathione binding [Evidence
                     IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HEX3992707.1"
                     /translation="MKRIVWGRATSSNVMKVLWCLGELELPFERIDVGGAFGKTDTNE
                     YRKMNPTGLVPTLQEDDFTLWESNVILRYLHAAYAPTSPLFPTEVHARANVDRWMDAQ
                     QTVLNRPIGVVFWGLVRTPADKRDMAAIAQGIADAARAWRMVEAELQQHDFIAGDTFT
                     LCDIPWGVHANRWFGMDYLGLERPELPALRAWYDRLCQRPAYQQHIVACPIA"
     gene            5577..5927
                     /locus_tag="VHX39_16180"
     CDS             5577..5927
                     /locus_tag="VHX39_16180"
                     /inference="COORDINATES: protein motif:HMM:NF042718.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6614 family protein"
                     /protein_id="HEX3992708.1"
                     /translation="MNIYHIWCDLKPGVSDLTFCEKITRYLGHLKEQGLIEGHRLTRK
                     KLGLGPATAGEFHIMIEVNDLAQLDTAFNHVAGRQEPVEGFHFGVNSLVTNATFALYR
                     DFPDPVRSAGEEKF"
     gene            complement(5962..>7570)
                     /locus_tag="VHX39_16185"
     CDS             complement(5962..>7570)
                     /locus_tag="VHX39_16185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992709.1"
                     /translation="MSLKQSRAKSPTVNGISLLLLLAATTVVLFAALRSPLKDDIAWL
                     LYVAHRWMAGRELYVDLIEVNPPLIIWLSAIPLAVARWLGVTPQIVAMPAFAAIALAS
                     AWWSACLLRPIGGLFAARIPVFAVVGSVLLIIPAADLGQREHLLVAAFLPYLILFART
                     LAPAANGTRPTVVASSAAGIVAALGCALKPQYAIVFIALEIVAFSYKLRPWRTAPVAA
                     AATLAGYFGLVAYLCPAYLRHAVPMALALYGATDVSFGALLVQCAPLLTAEVLAIFFW
                     WRDRRDLSQAKLMMTGMVFATLSSVVCFIDGKDWFYHRLPATVVTLLVLILWAASTIR
                     HRTEAVADEAPQQRRSHWRGLAAAGIVVTLFCVAAVQRLGPEVRQAVEPQATTVARLE
                     ALIRLHHARTYVAFSEWIALGFPVVNNTGVLWASRFDSMWALKGEFWRAQVDPAATKE
                     WPITHWVAQDFIAGCPDIAVVDTREGLNYIAVLSASEPSFARVWSRYKQIVAFEGLQV
                     YIRRKGKGGCIDPWVAAEGPEPRTAVR"
BASE COUNT         1666 a         2348 c         2332 g         1224 t
ORIGIN      
        1 ggaggacgcg gagatgctta ttggcgttgc cggtcctctc agcgtcctcc gggcactccg
       61 cggtctcggt gatattgcct tggtttcgga aggcactgac tgccagacgg tattacctaa
      121 ttggagaccg ccctaaatcg agccgcgcaa acgtggatcg agtgcatccc ttatgccgtc
      181 gccaagcaga ttgaatgcca gcacggtcaa cgtgatcgcc gcaccgggaa acagcaccag
      241 ccaccagggc ggcaccagcc cggcgttcaa tgaatccgcc agcatgttcc cccaggtcgg
      301 cgtcggcggc ggaatgcccg cgcccaaaaa cccgagcgca gcctcgatga tgatggccac
      361 acccaaatgc gtggttgcca ggatcaaata cggcgccacg cattgcggca aaatatgccg
      421 cagcatcacg cgagcgtgcg aggcgcccag accgcgggcg gcctccacgt acgacagttc
      481 cttcaacgac agaacgacgg agcggatgac cctgccgcca aacggaatcc gggtaatggc
      541 gatagcaacg atcacggtac cgaatccggc gccaagtgcc attgcaatgg ccattgccag
      601 aatcaggtcc ggaaacgatt gcaggaactc catcaggcgt tggctgatca aatcgaaccg
      661 gccgccgaaa tagccgcacg ccagccccca gaaggcgcca aacgtggtgc ccagtacgac
      721 agccgacacc gcaatggtca gcgaggcacg actgccgaat accacccggc tcagtgcgtc
      781 ccgcccgatc tgatcggtgc cgaagtaatg ccgttcgctc ggcggtttgg tcatcgcacg
      841 aaagtcggat ttcagcggcg gatataacgg cagcgccggg gccgcgaccg caatcacgat
      901 gatcagcgca gcgatgcagc cccagaatgc cgacatcggc gaccggcgcg cgaagtttcg
      961 caaaacgcgc cccatgcgag accaccggcc cggatgcgcg atcgtttcta tcccatcgag
     1021 cagcgcggtg atatcgctca ttggtaacgg atcctcgggt cgagccaggc aatcgtcaga
     1081 tcgatcacga tgttgatcat gacgaacacg accgcataaa caaacaccag attctgcatg
     1141 acgaagacgt cgcgttcgct caccgccgaa tacatcgcaa agccgagacc gggtgtggca
     1201 aaggcgcgtt cgaccgggat cgagccggcc agcacaaagc cgattaaaat gccggacaat
     1261 gtaatgaccg gcagcaacgc attgggcagg gcatgcagag ccacgacgag gcggccgctc
     1321 aatcccttgg cgcgtgcggt gcggacgtaa tcctcgcgga tgacctccag caacgccgat
     1381 cgcgccattc gggcgatata ggcggcctgc cccatgccaa gaacgaaggc cggtccaatc
     1441 acgacctgca ggttttccca cgggttatcc agcagcgaaa cgttggtcag cggtggccgg
     1501 tagccgaacc agaacagcat cgccaggatg atcagcatac ccacccagaa ccccggcacc
     1561 gccagaaaca ggatactgag aaaccgggca atattgtcgc cccaactgtt tggccgcagc
     1621 gcgctgacga tcgccaccgg gatgccgacg atccaggaca ggatcaccga cagcaacgcg
     1681 atctccgccg tcagcgggcc gcgccgcagc agcatttcag cgacgctttc ggagcggaag
     1741 aacgaatggc cgaaactgcc ggaggcgatg tcgcgcatcc agtgccagta ttgtacgatg
     1801 agcgggtcgc tcaggccgag ttgcgccata aagctggccc gctcggcggc ggtgagtttg
     1861 gtgtagccct ctggtccgaa caaggcgacc aaaggatcgc ccggcaaaac tcgcatcacc
     1921 acaaagacga cgacggagac gccgaacact gtcagcacgc cgtacgccag ccgcctgagg
     1981 atgtagctat acaccgacgg atgccatcag gccccttcga gaatgcgaat gtcccgctcc
     2041 gccccattgc ctaatgcttt gagcgccgcc tgatacccgg cactgtcatg tgcggcgatc
     2101 gctgcggcga cgctgtcgaa ctcgatcacc acggtgcgtt gcgcgaggcc cgcttcgtag
     2161 gttttcgccg gtgtgccgcg gaccagaaac ctgccgccac cagccataat cgagggcccg
     2221 gcgagcttgg cgtattcggc cagagcatca gggttggaga tcgagcggta ggtcgcgacc
     2281 caataggctt tcgccatggt gttatccttt cacggtcaaa tgcggcaagt cctcgccgcg
     2341 ggtttctttg ccaagcagca tcgccaggat actcaggccg gcgaagcagg tcatgatcgc
     2401 ggtcgccgtg ctgaactgcc cgcccagaag cggcgtgatg aggccggcaa acaacggacc
     2461 gaagctggtg atcacgcggc cggtgccatt gcagaatgac accgcggtgg cgcgcacctg
     2521 agtcgggaac agctcgggca ggtagacggc gtggccggag aatacgccaa acacgaagta
     2581 accgaatacc ggcagcaggt atgggtaaag gtcccagctt tggacgccaa gaaacaaata
     2641 aagcccggag acgatcgtgc cgacattgta gaagatcacc gccggccgtc ttccgaccgc
     2701 atcggcgatg aagccgaacg tggcgtaacc aaagataccg ccaattcccc atagcgtcat
     2761 gccgttaccg acatacggcg cactcgctgc accggtaata ccggctttct gcaacaactg
     2821 ggtctgaatg gtcggcaacc agatctggct cgtccagatc gccagcaacg tgccgagaca
     2881 aaacaggatg ccaatgaacg tgctgtagcg cagttccctg gtgaacaatt gctttggtgc
     2941 gaaggccagg aacttctcgt ccgcggcact gagcgaacgg gccgccttca gcgtccgcct
     3001 gcgctcctgc acatccttga agcgttccgg ttcttccatg ccacgccgca gcagcagcag
     3061 cgccagcgcc ggaacgatgc cggcatacat cacatagcgc cagccataag gtccgatata
     3121 agcaaagatc tggccggcga ccagattacc gaaggcagct ccggtcatca tgatgccgag
     3181 gaccttggcg cgttgctcgg ttgcaaaggc ctcggcgacc agcggaattc ccaccacgat
     3241 ctcggccccg gtgccgacac cggcaaagaa gcggaaaaac ccgagcaccc aggtgttggt
     3301 ggccagccct tgcaatccgg tgaacacggc aaccaacacg acactgagga tcagggttcg
     3361 aatgcggccg atgtaatcgc cgataatacc gaatccgaaa ccacccaaag cccagcccaa
     3421 caggccagcc atgctcagga agccgccggc ctgaccaatt tgcgcgatgg ttggattacc
     3481 gcccagaagc tcagtcagcg cgggccgcag gaccagattg aacaagccaa aatcggtcgc
     3541 gtccagcatc cagcccagcc acgcaaccag aaataccatc cattgataac gcgtgacgtc
     3601 cttgatccag gacaggcctc cactctcggc atttgtcgta aggctcatcg tcaactcccc
     3661 gtcgtacgcc tctcgggggc gcaccgccgc aattcttggc atgggaaggc gcgggttaca
     3721 atctctcgct caggcgaatc gcgatccggc aaccggtgcg aatggcggcc gatagcaatc
     3781 ggtagcctgg cgcctgctcg gcgtcgttgg ccagagcgat atcgcggtgt tcgcgttcct
     3841 cggcacgaaa ttctgtcaat gtgtcgcgca gcgcggcttc ggaaccgggg agacggtcga
     3901 tctgcgcggt atagtgagcg tcgatggttt cctcgaccgc gacggtgcat gccattgcgg
     3961 cccgctggcc gagagctgcg gtggccgcgc caagggcgaa gccggcgaga tgccagaacg
     4021 gcagcaacgc gctcggccgg acgtggcggt cggcaagcac agcgttgaat gtatcgagat
     4081 gcacctgctc ctgatcccgc atgtgacgga gctggtctgc gctggcactt cggcccagta
     4141 cggcaagctg gccggcgtaa atccgggcgg cgccatattc gccggcatgg tcgacgcgga
     4201 tcatgcggtg gacggccgta tcggttggta ggtcgccggg cagcggtcgt gccggagggt
     4261 ggttggtcat gtcgacggtg ggattttcgg gatcgctggg ctgcggctgc atgtcggggg
     4321 ctggtcggct ggtcatgaca ttggcctccg gctcgcgatc cacccggcaa ccagggcaaa
     4381 ggccgcggca aagagcaaat tcatctccgc catggacagc ttcaggccgg gaacgaggta
     4441 cgccggatca tcgcatggct tggagggcgt tgccggcatg ttcgccaaca gctccgcaac
     4501 cgatcccccc cgtgacacag gggctgcaca ttccggcaac gggctcggcc acaagtgaaa
     4561 ttccacccca acatggatga cgccaagtgc cgcgccaccc agcatggtca atgccaacaa
     4621 ccccagcgca acgcgggcgt actgggctgg cagcagggcg gcagcgaggc ccaatatgat
     4681 ggcaatccga tagggccagc gctccaacag acatagcgca cagggcacca gcccacccca
     4741 ccgctccgat gcgattgcga tcccgagcgc aatggcggag gcaatcgcgg caatcagccc
     4801 gcaagtgcga tgcgacaaaa tgggagacgc cagcatggcg gccatgtgcc ctcggttcgg
     4861 gcatggcgca aggggcagcc cagagctagt ctggacttcg agcaatcagg agacagcacg
     4921 cgatgaaacg catcgtctgg ggccgcgcca cctcgagcaa cgtcatgaaa gtcctctggt
     4981 gtcttggcga gctagagttg ccattcgaac ggatcgatgt cggcggtgcg ttcggcaaga
     5041 cagatacaaa cgagtatcgg aaaatgaacc cgaccggatt ggtgccgaca ttgcaggaag
     5101 acgatttcac gctgtgggaa agcaatgtca tcctgcgcta tttgcatgcg gcgtacgctc
     5161 ccacatcacc gttgtttccc accgaggtgc acgcgcgcgc caacgtcgat cgctggatgg
     5221 acgcgcagca gactgtgttg aaccggccga tcggcgtggt gttctgggga ttggtgcgca
     5281 ctccggcgga caagcgggac atggcggcga tcgcccaggg aattgcggat gcagcgaggg
     5341 cgtggcgcat ggtggaggcg gagttgcagc agcacgattt catcgccggc gatacgttta
     5401 cgctgtgtga cattccctgg ggcgtgcatg ccaatcggtg gttcgggatg gactatcttg
     5461 gcctggagcg gccggagttg cctgccctgc gggcgtggta cgaccggtta tgccaacgtc
     5521 cggcctacca gcagcatatc gtcgcctgtc cgatcgcctg acatggcgga agtggaatga
     5581 acatttatca catctggtgc gacctgaagc caggagtcag tgatctcacg ttttgcgaaa
     5641 aaatcacacg gtatctggga catctgaaag aacaaggact gatcgagggg catcggctga
     5701 cccggaaaaa gcttggcctc ggcccggcga cggctggcga gttccacatc atgatcgagg
     5761 tgaacgacct ggcgcaactc gacaccgcgt tcaatcacgt ggccggacgg caagagccgg
     5821 tcgagggatt tcatttcggc gtcaattcgc tggtgacgaa cgcgaccttc gcgttgtacc
     5881 gggatttccc cgacccggtc cgcagtgccg gggaggagaa gttctgatca gacgtgcgcc
     5941 ggcgtgtcag cgtccggacc gttaccgcac cgctgtccgg ggttctggtc cttccgctgc
     6001 cacccacggg tcgatacaac ctcccttacc cttacggcgg atgtagacct gcaatccctc
     6061 gaacgcgacg atctgcttgt agcgggacca gacgcgagca aaggatggct ccgacgcact
     6121 caggacggcg atgtaattta gtccctcccg ggtatcgacc acggcgatat ccggacaacc
     6181 cgcaatgaag tcctgagcga cccaatgggt gatcggccat tccttggtcg ccgccgggtc
     6241 gacctgtgct cgccaaaact cccctttcag cgcccacatc gagtcgaagc gcgacgccca
     6301 caacacgccg gtattgttga ccaccggaaa accgagcgcg atccattccg agaacgcgac
     6361 gtaagtccgg gcgtgatgca ggcggatcaa tgcctccagc cgtgcaacgg ttgtagcctg
     6421 cggctcgact gcctgacgca cttcggggcc caggcgctgt actgcggcaa cgcagaagag
     6481 cgttacgaca attccggcgg ccgcaagtcc acgccagtgc gaacgtcgtt gttgaggggc
     6541 ctcgtcagcg acggcctcgg tgcgatgccg aattgtggag gcggcccaca ggatcagcac
     6601 aagaagtgtg accaccgtcg cgggcagccg atggtagaac cagtccttgc catcgatgaa
     6661 acagaccaca ctggacaggg tggcgaacac catgccggtc atcatcagct tcgcctggga
     6721 cagatctctc cggtcgcgcc accagaagaa aatcgccaga acctcggctg tgagcaacgg
     6781 agcgcattgg accaatagcg cgccgaatga aacgtcggtc gcgccataga gcgccaacgc
     6841 catcggcacg gcgtgacgca aataagccgg acaaagatat gcgacgagac cgaaataacc
     6901 cgccaacgtc gcagccgctg cgacgggtgc ggtccgccac ggccgcagtt tgtagctgaa
     6961 agccacgatc tcaagtgcga tgaagacgat cgcatattgc ggtttcaggg cgcagccgag
     7021 agcggccaca attccggctg ccgacgaagc aacgactgtt ggccgcgtgc catttgccgc
     7081 gggagcgagg gtccgggcga acagaatcag gtagggcaga aacgctgcca ccagcaaatg
     7141 ttcgcgctgc ccaagatcgg cagccggaat gatcagcagc acgctgccca caacggcaaa
     7201 caccgggatc cgcgcggcaa agagcccgcc tatgggccgc agcagacacg cgctccacca
     7261 ggcgctggcc aacgcgatcg cggcaaaggc cggcatggcg acgatttgcg gcgtgacccc
     7321 gagccagcgg gccacagcca gcgggattgc ggaaagccaa atgatcagag gcgggttgac
     7381 ctcaataagg tcgacataaa gctcccgtcc ggccatccag cggtgggcaa catacaacag
     7441 ccaggcaatg tcgtccttga gcggcgagcg caaggccgca aacaggacaa ccgttgtcgc
     7501 ggcaagcagc agcaacaggc tgatgccgtt cacggtcggg ctcttggccc tggattgttt
     7561 aaggctcatg
//
LOCUS       DATAVD010000843         5503 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_81763, whole genome shotgun sequence.
ACCESSION   DATAVD010000843 DATAVD010000000
VERSION     DATAVD010000843.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5503
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81763"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            404..814
                     /locus_tag="VHX39_16190"
     CDS             404..814
                     /locus_tag="VHX39_16190"
                     /inference="COORDINATES: protein motif:HMM:NF024759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEX3992710.1"
                     /translation="MDLIDDSDLTWRVIGCAIEVHHHLGPGLLESIYEAALCHELSRA
                     GIAFVRQRKLRVKYQGVDLDCEFVLDLVVEGLLVLEIKAVAQLLPIHEAQLLTYLRIS
                     GLPLGLLLNFNEVRLKDGIRRRRLSPIPTEEKSK"
     gene            1093..2484
                     /locus_tag="VHX39_16195"
     CDS             1093..2484
                     /locus_tag="VHX39_16195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992711.1"
                     /translation="MDEETITVTAVHDGLPPTQRAIAMLAVGIAVSISVLVGSIANIA
                     LPTIARDMNVTPAESIWVVNAYQLAVTVCLMPCASLGDVYGHRRVYIWGLVFYTLGSL
                     ICALAPDMPTLIAARVLQGIGGAGIMSVNGALVRFIFPRAQLGRGVGYNVLVVAASSA
                     AGPSVAAAIMAFGSWPWLFAVQVPFGAVSWWLSLRYLPRSPPSGHKFDPVSALLNAVA
                     LGTFIPGLDGIGRGQSATMILLELAIGIVVGTIFLRRQLTLRAPMLPVDLFRRPVFAL
                     SVATAVCVHGAAMITLITLPFYFQYVDGLSPIEIGMLITPWPAVLVIIAPIAGRLADR
                     YPAGLLGGLGLAVMTVGLLLVLFLPEHASKLDIAWRMAVCGTGFGFFQSPNNRLLIGS
                     APPDRAGAGSGMVSTARLVGQTTGSALVAVVLGLTHNAAHPVVLGTHMAIGVAAGLAA
                     LGTVLSWARLANR"
     gene            2645..3016
                     /locus_tag="VHX39_16200"
     CDS             2645..3016
                     /locus_tag="VHX39_16200"
                     /inference="COORDINATES: protein motif:HMM:NF042631.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6559 family protein"
                     /protein_id="HEX3992712.1"
                     /translation="MRKRRAIRGYVRKLPRMLCVDYGFAQAYTPQQIRATIERNGLNL
                     DHLAYAVAMFSDPAGFAQFHENTGDRYKWTAMRDEVAAYYMDANANFDVSHMMNAFGD
                     AAGGGTEVGLHGGADGHGGGH"
     gene            complement(3106..4101)
                     /locus_tag="VHX39_16205"
     CDS             complement(3106..4101)
                     /locus_tag="VHX39_16205"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3992713.1"
                     /translation="MDGSPNLNSHLLARTDHFDGRRFFNPYAPHPRTPSDVRRWRRER
                     RKEPWPERVAVPFLPPPGNAAHDRISATFIGHSTFLVQIGGLRVLTDPIWSERCSPVS
                     FAGPRRARRPGQSLDALPGVDLLLVSHNHYDHMDLPTLREVRKRWAPPVATGLHNARH
                     LAKAGMRSAVELDWWDSTELAGARVTYVPAQHFSARTLRDRDRSLWGGFVIEANGATV
                     YFAGDSGYSPHFAEIGRRFPRIDLALLPIGAYEPRWFMRRNHVDPSEAVRAHLDITPR
                     RSLGMHFGTFQLTDEAIDAPVVALREARSEAGVADHEFDVLEFGETREFAMATKD"
     gene            complement(4216..5133)
                     /locus_tag="VHX39_16210"
     CDS             complement(4216..5133)
                     /locus_tag="VHX39_16210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HEX3992714.1"
                     /translation="MAVPIILDCDTGTDDAVAILLALASPELDIRAITVAGGNVGLDR
                     TLANTLALVRLARSDVAVYQGADRPLLGSFFNEPRVHGIDGLGGIVLPEGGQPAPELA
                     ADAIRRILRTSPEPVTLVGIAPVTNLALALMTEPALAANVAQIVLMSGAWAEGNATPA
                     AEFNALNDPEALAVLLACGRPVVFATLELTAQALATPGRLAVMRGLGSGRCLAAMCDI
                     QASVPQSRRLPGAPLHDPCAIAWLLRPDLFTTRSCPTRVDLGPGIGRGRTVIDRWDRT
                     GEAHNAVVLETLDADGFFTLLGERVSRLP"
     gene            5265..>5503
                     /locus_tag="VHX39_16215"
     CDS             5265..>5503
                     /locus_tag="VHX39_16215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEX3992715.1"
                     /translation="MTTDADPLATHRAAYAKAVVARYGADDPAVEVAFAKVPREAFLG
                     PSPWSCGRGGPLPWSRTSEVEALYQDVLVALDPAKG"
BASE COUNT          986 a         1763 c         1737 g         1017 t
ORIGIN      
        1 tggctccgca gccacgcttt cccgcgccgc gaccatccag atatatcgtc gtgccacccc
       61 gattcaccag tccttaatcg gcctcagtca agcgtaacca cagaaccgca gagccgcaga
      121 gaattcttac tcaacgttgg cgacagtgct cgcctgtcga agctggcgcg tggcgcagcg
      181 gctatccgcg ccgcgatcga tcccgctcac cgcgaggccg ggttgggctg agaggcgtcg
      241 ggcccaccgc ccggaaaact ccgtggctct gcggctctgt ggttgcgatt accttcgcat
      301 caaccactcc ggcccacccg gttcccctac aaccgtcgat tcacgactcc ttaatcggcc
      361 tcaggcaagc ataaccaccg agccacagag ccgcagagat ttcatggacc tcatcgacga
      421 cagtgatctg acatggcggg tgattggttg tgcgatcgag gttcatcatc acctcggtcc
      481 tgggctgctc gaatcgattt atgaagccgc gctttgccat gagctgtcgc gcgccggcat
      541 cgcgttcgtc aggcagcgca aactcagagt gaaataccag ggcgtcgacc tggactgcga
      601 gttcgtcctc gatctggtcg tcgaaggtct gctggtgctg gagatcaagg ccgtggccca
      661 gttgctgccg atccacgaag cccagttgct gacgtatttg cggatcagcg ggctgccgct
      721 tggtttgttg ctgaacttta acgaggtccg gttgaaagac ggcatccgaa gacgtcgtct
      781 ctcacccatt ccgacagagg agaaatcgaa atgatcgccc ggaagacacg cgcccgccca
      841 cccgaagaac tctgcggctc tgtggctctg tggtaaagct tacccacgca tcgacacatc
      901 ggggcgtatg agttggagtc cccctcgtct gggcgaaact ccgctacagg cctcaggcaa
      961 gcgttaccac agagccgcag agccacggag aattcccaca cggcattggc gacggtgctg
     1021 gccggtgggt gacacgccag ccgcgatccc ctacagccgt ccgatatcga gcgaagcgaa
     1081 tttcaatccg gcatggacga agaaaccata accgtcaccg cggtgcacga cggcctcccg
     1141 ccgacgcagc gtgccattgc catgctcgcg gtaggcatcg ctgtcagcat ttccgtgctc
     1201 gtcggatcga tcgccaacat cgctctaccg accatcgccc gcgacatgaa cgtcaccccg
     1261 gccgagtcga tctgggtggt caacgcctat cagctcgccg tcacagtctg cctcatgccc
     1321 tgcgcgtcac tgggcgatgt ctacggtcac cggcgagtct acatctgggg cctggtgttt
     1381 tacacgctcg gttcgctgat ttgcgcactg gcgccagaca tgccaacgct gatcgctgcc
     1441 cgcgtcctgc agggcatcgg cggtgccggc atcatgagcg tcaacggcgc actcgtccgc
     1501 ttcattttcc ccagggcgca acttgggcga ggagtcggct acaacgtgct ggtcgtagcg
     1561 gcgtcctcgg cagccggccc atccgtcgcg gcagcgatca tggcattcgg atcgtggccg
     1621 tggctgttcg cagtgcaggt gccgttcggc gcggtgtcct ggtggctgtc actgcgttat
     1681 ttgccgcgct caccgccgtc aggccacaaa ttcgatcctg tcagcgcgct gttgaacgcg
     1741 gttgctctcg gcacgttcat tccgggtctg gacggcatcg gccgaggtca gtcggcgacg
     1801 atgatcctgc tggagctggc catcgggatt gtcgtcggca caattttcct caggcgccaa
     1861 ctgacgcttc gcgcgccgat gctgccggtc gatttgtttc gccggccggt gtttgcgctg
     1921 tccgtcgcga ctgcggtctg cgtgcatggc gcggcaatga tcacgctgat cacgctgccg
     1981 ttctatttcc agtacgtcga tggtctgtca ccgatcgaga tcggcatgtt gatcacgccg
     2041 tggcccgccg tgctggtcat cattgctcca atcgccggcc gtctcgccga tcgttaccct
     2101 gccggactgt tgggcggcct gggcctcgcc gtcatgacgg tcgggctgct gctggtgctg
     2161 tttttgccgg agcacgcgag caaactggat attgcctggc ggatggccgt gtgcggcacc
     2221 ggctttggct tcttccaatc gcccaacaat cggttgctga tcggcagcgc accgccggat
     2281 cgggcggggg cgggcagtgg catggtctcg accgctcggt tggtgggaca gaccaccggc
     2341 agcgcgctgg tcgctgttgt cctggggttg acgcataatg cagcccaccc ggtggtattg
     2401 ggcacgcaca tggcgatcgg agtcgcggcc ggccttgcag cactcggcac tgtgttgagt
     2461 tgggcacggc tggccaaccg gtagccgcca tgaagttaag gcgttgttta ccaacggccc
     2521 atcgctcggc cgacggcatg gaacgcccga ggggcctggc ggaagagatc ggtctgtgca
     2581 atagtcgcgc gatatcgccg cactggtcct gaccgcaggg ggggaaatga ggtttctcgg
     2641 cgaaatgcga aaacgcagag cgattcgggg ctatgtacga aagctaccca ggatgctttg
     2701 tgtcgattat ggcttcgcac aagcttacac gccgcagcaa atcagagcga cgatcgaacg
     2761 caatggattg aacctggacc atttggccta tgctgtggcg atgttttccg atccagccgg
     2821 atttgctcaa tttcatgaga atacgggtga tcggtacaaa tggacggcga tgcgggatga
     2881 ggtcgcggcc tactacatgg atgcaaatgc aaactttgac gtatcgcaca tgatgaatgc
     2941 gttcggtgac gctgccggtg gcggcactga agtcggcttg catggcggcg cggacggaca
     3001 tggcggcggc cattgaagcc tctgggcgcc agattgtgaa ccttggccgt cataccaaac
     3061 gacgccgctt tcatggcaca cccactcaac cgggcgtgcg cacgctcaat cctttgttgc
     3121 catcgcaaac tctcgcgttt caccgaattc gaggacatcg aactcgtggt ccgccacgcc
     3181 ggcctccgac cgggcctccc gcaacgccac caccggcgca tcgatcgctt cgtcggtcaa
     3241 ttgaaacgtc ccgaaatgca tgcccagact gcgacggggt gtgatgtcga gatgggcgcg
     3301 caccgcctcc gacggatcga cgtggttgcg ccgcatgaac caccgcggct cgtacgcccc
     3361 gatcggcaac agcgcgagat cgatccgcgg gaaccgccgg ccaatttcgg caaagtgcgg
     3421 actgtatccg gagtcgccgg caaagtacac cgttgcgccg ttggcctcga tgacgaaccc
     3481 gccccacagc gaccgatcgc ggtcacgcag cgtgcgcgcc gaaaaatgct gcgccggcac
     3541 atacgtcacc cgcgcacccg caagctcggt actgtcccac caatcgagct ccacggccga
     3601 tcgcatcccg gctttcgcca ggtggcgcgc gttgtgcaga ccggtcgcaa cgggcggagc
     3661 ccaccgcttc cgcacctcgc gcaaggtcgg caaatccatg tggtcgtaat gattgtgcga
     3721 gaccagcagc agatcgacac ccggcagtgc gtccaggctt tgacccggcc gccgcgctcg
     3781 ccgtggaccg gcaaacgaaa ccgggctgca acgctcggac caaatcgggt cggtgagcac
     3841 gcgaaggccg ccaatctgca ccaggaacgt cgaatggccg atgaatgtcg ccgaaatgcg
     3901 gtcatgcgcc gcattgcccg ggggcgggag gaagggaacc gcaactcgct caggccatgg
     3961 ctccttgcgt cgctcgcgcc gccaacggcg gacatcgctg ggagttctgg gatggggggc
     4021 gtacgggttg aaaaaccggc gtccgtcgaa gtgatcggtg cgtgccagca aatgcgagtt
     4081 caggttcggc gatccatcca tgcgtatggt cctatgccgc gtaaaacatc aaaacagaaa
     4141 gttttcggat tgctgcggct cggggaaatg gcttccacgc gcttggcaga ttttggtttc
     4201 tcaaagcgag ggcgctcacg gcaagcgcga cacgcgctcg cctagtagag tgaagaaccc
     4261 gtccgcgtcc aacgtttcca gcaccactgc gttgtgggct tcgccggtgc ggtcccaacg
     4321 gtcgatcacg gtccgtccgc ggccgatccc cggcccgaga tcgactcgcg tcggacagga
     4381 ccgggtggtg aacagatccg gccgcagcag ccacgcaatg gcgcacggat cgtgcagtgg
     4441 cgctccgggc aaccgtcgcg actgcggcac gctcgcctgg atgtcgcaca ttgccgccag
     4501 gcagcgcccg gagccaagac cacgcatcac cgcgaggcgg cctggcgtgg ccagcgcctg
     4561 agctgtcagc tccaacgtgg cgaacacaac cgggcggccg cacgccaaca gcacggccag
     4621 cgcctccgga tcgttcagcg cgttgaattc cgcggcgggg gtggcgttgc cctcggccca
     4681 tgcgccgctc atgaggacga tctgggcgac attggcggca agcgccggct cggtcatcaa
     4741 ggccagcgcc agattggtga ccggcgcgat gccgaccaag gtcaccggct cgggcgaggt
     4801 ccgcaggatg cgccggatcg catcggcggc cagttccggt gccggctgtc cgccctccgg
     4861 cagcacgatg ccgccaaggc cgtcgatccc gtgcaccctt ggttcattga agaacgagcc
     4921 gagcaacggt cggtccgcgc cctgatagac cgcaacatcc gagcgcgcca accggaccag
     4981 cgccagcgta ttggccagcg tgcgatccag cccgacattg cctccggcga cggtaatggc
     5041 ccggatgtcg agttcgggcg aggcgagggc aagcaagatc gccactgcgt catcggtgcc
     5101 ggtgtcgcag tccagaataa tcggcactgc catggtgggg tctcctgtgt cgacgcgacg
     5161 aaccacgatg gcattcggac cagtgcgata ccacccacaa gccgtgggcg cggcgatccc
     5221 gacgcgattg cagcgtgaat cgtctgttgt ggtatgaggc gtccatgacc accgatgccg
     5281 atcctctggc cacacatcgc gcggcttatg ccaaggcggt ggtggcacgg tatggcgccg
     5341 atgatcccgc cgtcgaggtc gcattcgcca aggtgccgcg tgaggcgttt ctcggcccgt
     5401 ctccctggtc ctgcggccgg ggtggcccac tcccgtggtc ccgaacgagc gaggtggagg
     5461 cgctgtatca ggacgtgctt gtcgccctgg atcccgccaa agg
//
LOCUS       DATAVD010000844         1882 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1940954, whole genome shotgun sequence.
ACCESSION   DATAVD010000844 DATAVD010000000
VERSION     DATAVD010000844.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1940954"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..772)
                     /locus_tag="VHX39_16220"
     CDS             complement(<1..772)
                     /locus_tag="VHX39_16220"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3992716.1"
                     /translation="MANNSADYDFLAGVRVVDFTQFEAGPSCTEALAWLGAEVVKIEN
                     PGRGDPGRRLRPGQPDDDPYYFQQFNANKKSITLNLKAPEGLAIVKDLLRKADITVEN
                     MAPGTIERLGLGYDEVKKLNPGIIFCQVKGFGEGSPYERNLAFDMIAQATGGTISVTG
                     ERGRQPVKPGLSLGDTGTGMTMAITILGALRKRDKSGEGCRLQVAMQDAMLHYMRTNF
                     STQARTGKAVERDGTRSGGGSNAPSGLYPCAPGGLNDYV"
     gene            complement(822..>1882)
                     /locus_tag="VHX39_16225"
     CDS             complement(822..>1882)
                     /locus_tag="VHX39_16225"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992717.1"
                     /translation="VVSAARTMPMLLFGAFSGVVTESVSRKHVLQIGQILTCVSAIII
                     ASLAFLGVVRPWHLAVSSFVSGMVWSTEMATRRRMVGESVDGHLVSRALALDTMSNSG
                     ARLVGPIAAGVIYQHLGIAGSYAVSAAVYAVAAWITRGVRYNQQSRRFLVSQVPRDLA
                     EGIAFARGHITIAGVLAVTIAMNLLGFPYSALVAPIGRQVFFVSPTLVGILAASEAFG
                     GFLGGMWLSSGEPRLSGRTLMVGGSLVFVTCVFLMPLAPAFPLACGLLALGGFGSAAF
                     ANMQTSLIVLHAPAPIRSRLMGLLTVCIGMGPVGILLVGFLADRIGPMQAIDVVESVC
                     FVWVIWIGLRWRRRERVG"
BASE COUNT          407 a          627 c          526 g          322 t
ORIGIN      
        1 agacgtaatc gttcagtcca cccggcgcgc acggatacaa tcccgacggc gcattgctgc
       61 caccgcccga gcgtgtgcca tcccgctcca ctgctttgcc ggtacgtgcc tgggtcgaga
      121 aattggtgcg catgtagtgc aacatcgcat cctgcatcgc cacctgcaga cggcagcctt
      181 cgccgctttt gtcacgttta cgcaatgcgc cgagaatggt gatcgccatt gtcattccgg
      241 tgccggtatc acccagcgac agccccggct tcaccggttg ccgtcccctt tcgccggtca
      301 cactgatcgt tccccccgtc gcctgcgcga tcatatcgaa tgcgagatta cgttcgtaag
      361 ggctgccctc gccaaatccc ttgacctggc aaaagatgat gccgggatta agtttcttca
      421 cctcgtcata gcccagaccg agacgttcga tcgtgccggg tgccatattc tcgacggtga
      481 tgtccgcctt gcgcagcagg tccttgacga tcgccagtcc ctcgggcgct ttcaggttca
      541 acgtaatcga cttcttgttg gcgttgaact gctggaaata atacggatcg tcatcaggtt
      601 ggccgggacg cagccgacgc ccaggatcgc ctctgccggg attctcgatt ttcaccacct
      661 cggcgccgag ccaggcgagg gcttcggtgc aggaggggcc tgcttcgaac tgggtaaagt
      721 cgacgacccg gactccggcg agaaagtcgt agtcagcgct gttgttcgcc atggtgcgat
      781 cctccctcaa ctgtaatccc agtttcgcac aaacccggcg gttatccaac acgctcccgc
      841 cggcgccagc gcaggccgat ccagatgacc cacacgaagc acacgctttc aacgacatcg
      901 atggcctgca ttggaccgat gcggtcggcc agaaacccaa ccaacaggat tcctaccggt
      961 cccataccga tacagacggt caacaatccc ataagccgtg acctgatcgg tgccggcgcg
     1021 tgcagcacga tcagcgaggt ttgcatgttg gcgaacgctg ccgaaccgaa accgcccaag
     1081 gccaacaatc cgcacgccag cgggaaggcc ggtgccaacg gcatcaggaa cacacacgta
     1141 acaaatacca gcgagccacc aaccatcagc gtgcggcctg acaggcgcgg ctcgccgctg
     1201 gacagccaca tcccacccag aaaaccacca aaggcttccg aggcagccag gattccgacc
     1261 agtgtcggag aaacgaagaa cacctgccgg ccaattggtg cgaccagggc agagtacgga
     1321 aaccccagca ggttcattgc aatggtgact gccagcacgc cggcaatcgt gatgtgcccg
     1381 cgggcgaatg caatgccctc ggcgagatcg cgcggcacct gtgagacgag gaaccggcgg
     1441 ctctgctggt tgtagcgcac gcctcgggtt atccatgccg ccacggcgta aaccgcggca
     1501 gaaacggcgt aggatcccgc gatacccaga tgctgataga tcactccggc ggcaatcggt
     1561 ccgaccagac gcgcgcccga gttcgacatc gtatcgagtg ccagggctcg cgacacgaga
     1621 tgcccgtcca cactctcacc caccatgcgg cgccgggttg ccatttcggt cgaccacacc
     1681 atgcccgaaa caaacgacga aaccgccaga tgccatggcc ggaccacccc cagaaacgcc
     1741 agcgaggcga tgatgatggc cgacacacag gtcagaatct ggccgatttg caagacgtgc
     1801 ttgcggctca ccgactcggt caccactccg gaaaacgcgc cgaacagcag catcggcatg
     1861 gtgcgcgctg ccgaaacgac tg
//
LOCUS       DATAVD010000845         3261 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3242042, whole genome shotgun sequence.
ACCESSION   DATAVD010000845 DATAVD010000000
VERSION     DATAVD010000845.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3261
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3242042"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1016)
                     /locus_tag="VHX39_16230"
     CDS             complement(<1..1016)
                     /locus_tag="VHX39_16230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX3992718.1"
                     /translation="MRYAPAGVQLAAGTLLLLGLTAATAPAQTNDLVTMQANAANVVM
                     PTMTYDNQRYSTLDKITAQNVGRLQVAWTFSTGVLRGHEGAPLVIGDVMYVHAPFPNT
                     VFALDLNHDGKILWKYEPKQDPNVIPVMCCDTVNRGLAYSDGKLFLHQADTTLVALDA
                     KTGKVDWSVKTGDPGKGETGTGAPMVVKDKVYVGVSGGEFGVRGWVTAYSTADGKQIW
                     RAYSEGPDSDLLVDPQKTTVLGKPLGADSSLKTWEGDQWKIGGGDTWGWYSYDPKLNL
                     IYYGSGNPSTWNPKQRPGDNKWSMTIFARNADTGVAKWVYQMTPHDQWDYDGVNEMIL
                     SDLQ"
     gene            1487..2350
                     /locus_tag="VHX39_16235"
     CDS             1487..2350
                     /locus_tag="VHX39_16235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014242216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinoprotein relay system zinc metallohydrolase
                     2"
                     /protein_id="HEX3992719.1"
                     /translation="MEVPLTVRNVAPGDYVHFGQIALTTPDNEGDIANLGIIIGRDAV
                     AVVDTGGSVSVGRRLLLAVRRLTALPIRYVINTHEHPDHIFGNAAFGADLTFVGHHNL
                     PTEMAKRGAYYLQSFRTQLGDKAIAEVRIIPPTLLVDTEIELDLGDRRLRLTAWSPAA
                     HTDCDLTVLDETTGVLYSGDLVFLRHIPVVDGSLTGWLSLLPRLSELHAKIVVPGHGD
                     TVAPWPAALDDERRYFTVLAQDTRRLIAAGTGMAQAVPQIAASERDRWQLFDDYNPRN
                     ATEAFGELEWQ"
     gene            2331..>3261
                     /locus_tag="VHX39_16240"
     CDS             2331..>3261
                     /locus_tag="VHX39_16240"
                     /inference="COORDINATES: protein motif:HMM:TIGR04557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinoprotein dehydrogenase-associated SoxYZ-like
                     carrier"
                     /protein_id="HEX3992720.1"
                     /translation="MNWNGNNLNRQPWQAIHHASPAITCYNTGVLRSDQITAADLKSA
                     NSRRKGAIMTRLSPHPMPRRLVLLAPLAIGAVGRSANGQAPAQEDPWPALSAQIFDGK
                     TLQDGSAILTIDAPYRAEDAALVPVGIRTQLPADDARSVRAVTLVIDENPSPVAAVFS
                     PGAASGMRLLSTRVRVDSYTNVHAVAELSDGQLYATQRFVKAAGGCSAPAAKQEADSI
                     PLGTMRFRQVPDGPGQDPERREAQLMIRHPNYSGMQMDQVTRLYVPAHFVQTVHLWLG
                     DTLLLGIESGISISENPVYRFDYHSNGATEFRAE"
BASE COUNT          622 a          983 c          968 g          688 t
ORIGIN      
        1 atctgcaggt cggacaggat catttcgttg acgccgtcat agtcccactg atcgtgcggc
       61 gtcatttggt agacccactt cgccactccg gtatcggcat tgcgtgcgaa gattgtcatc
      121 gaccatttgt tgtcgcccgg ccgctgcttc gggttccagg tggaaggatt gccggatccg
      181 taataaatca aattgagctt cgggtcgtac gagtaccagc cccaggtatc gccgccgccg
      241 attttccact gatcgccttc ccaggtcttg aggctcgagt cggcgccaag cggcttgccg
      301 agcaccgtgg tcttttgcgg atcgaccaga agatcactgt ccggaccctc ggaataagcg
      361 cgccagattt gcttgccgtc agccgtcgaa taggccgtaa cccacccgcg cacgccgaat
      421 tcgccgccgg agacgccaac gtagaccttg tcctttacga ccatcggtgc gccggtgccg
      481 gtctcgccct tgcctggatc gccggttttc accgaccagt ccaccttgcc ggtcttcgcg
      541 tcgagcgcca ccagagtcgt gtccgcctga tgcaggaaca gtttgccgtc ggaataggcg
      601 aggccgcgat tcaccgtatc gcagcacatc acgggaatga cattgggatc ctgttttggt
      661 tcgtacttcc acaagatctt gccgtcatga ttcaggtcga gcgcaaatac cgtattggga
      721 aatggagcat gcacgtacat gacatcgccg atgaccagtg gtgcgccttc atgaccgcgc
      781 aatactccgg tggagaaggt ccacgcgacc tgtaaccgac caacgttttg tgcggtgatc
      841 ttatccagtg tggaataccg ctgattgtcg taagtcattg tcggcatcac gacatttgca
      901 gcgttggcct gcatcgtaac gagatcgttg gtttgtgcgg gtgctgtcgc ggcggtcagg
      961 ccgagcaaca acaaggtgcc tgccgcaagc tgaactccgg ccggagcata tcgcattggt
     1021 tcctcccact tatggttttg cgtacggcgg acggtcaaag accgacgacc ggtcacatcc
     1081 ggttcgatgg gaaagcggct cctccggtac ctgtccaggt aatccgccaa tgcaggctgt
     1141 cacgcgaccg acgctggccg atttaccccg gcggacgccg ccctcccagg cgcggtctat
     1201 ccgtggtaac aaggctgtgg tgttgcttca cctttggcta tcaggtctgt gacgttataa
     1261 cctaaaaggg ggccacgcaa cccctggtgg cgcacatatt gccggttttg gcaaactctg
     1321 aggcgatgct gtgacaaatc aacgaggcgt cgtaccgtgc gaaactgtcc ccttgtgggg
     1381 tatgcgcggt cggcgaaata caaaatgggg ctcacctgcc gccattacta aggtggcact
     1441 gcttggcgtc gttttgacct tcggtaccgg cagggcagcg ccacccttgg aggtcccgct
     1501 gactgtccga aacgttgccc ctggcgacta cgtccatttc gggcagattg cgctgaccac
     1561 tccagacaac gaaggcgaca tcgccaacct tggcatcatc atcgggcgcg acgcggtcgc
     1621 cgtcgtggac accggcggta gcgtttccgt tggacggcga ttgctgctgg ccgtccggcg
     1681 tctcaccgca ttaccgatcc ggtatgttat caacacgcac gaacacccgg accatatatt
     1741 tggcaacgcc gcgttcggag ctgatttgac atttgtcgga catcataatt tgccgaccga
     1801 gatggcgaaa cgcggtgcct actatctcca gtcatttcgc actcaactgg gcgataaggc
     1861 gatcgccgag gttcggatca ttccaccaac tctattggtt gatactgaaa ttgaactcga
     1921 cctgggggat cggcggctgc gcctcacggc ctggtcgccc gcggctcaca cggattgcga
     1981 cctgacggtg ctggatgaaa ccactggcgt gctatactcg ggcgatctgg tatttttgcg
     2041 ccatatcccg gtggtggacg gcagcctgac cggctggctt tcgttgcttc cccgtttgag
     2101 cgaactccac gccaaaatcg ttgttcccgg tcacggcgac accgtggcgc catggccggc
     2161 ggcgctcgat gatgagcggc gctattttac ggtgctggcc caggatacgc ggcgactgat
     2221 tgcggcgggg acagggatgg cacaggcggt tcctcaaatt gccgcttcgg agcgagatcg
     2281 gtggcagttg ttcgacgact acaacccgcg caatgcgacc gaggcctttg gtgaactgga
     2341 atggcaataa tctcaaccgc cagccatggc aggcaattca ccacgccagt ccggcgatta
     2401 cctgctataa caccggcgtg ttacgaagcg accagatcac tgccgcggac ctgaagtccg
     2461 ccaacagccg caggaaggga gcgatcatga ccaggctatc accgcatccg atgccgcgcc
     2521 gcctcgtgct gttggctccg ctggcgatcg gcgctgttgg ccggagcgcg aacgggcagg
     2581 cgccggcgca ggaagatccc tggccagcgc tttccgcaca aatctttgac ggcaaaacgc
     2641 tccaggatgg cagcgcgatc ctgacaatcg atgcaccgta tcgcgccgag gatgccgcgc
     2701 tggttccggt cggaattcgc acgcagttgc ccgcggacga cgcacgaagc gtccgtgccg
     2761 tcacgttggt gatcgatgaa aatccctcac cggtcgcggc cgtgttctcg cctggcgcgg
     2821 ccagtggaat gcggttgctt tcgacccggg ttcgcgtcga ctcctacacc aatgttcacg
     2881 ccgtggcgga actgagcgac ggacagcttt atgcgacgca acggttcgtc aaggcggcag
     2941 gcggctgctc cgctccggcc gcgaagcagg aagcggattc gatcccactg gggaccatgc
     3001 gtttccgaca agttcccgac gggcctgggc aggatcccga gcgccgagag gcacaattga
     3061 tgatccggca ccctaactat tccggtatgc aaatggatca ggtgacccgg ctctacgtgc
     3121 ctgcgcattt cgtccaaacg gtgcatttat ggttgggtga cacgctgttg ctcggcatcg
     3181 aaagcggcat ttcgatttcg gagaacccgg tctaccggtt tgattaccat tccaacggcg
     3241 cgaccgagtt tcgcgctgaa a
//
LOCUS       DATAVD010000846         2971 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1941165, whole genome shotgun sequence.
ACCESSION   DATAVD010000846 DATAVD010000000
VERSION     DATAVD010000846.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2971
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1941165"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..808
                     /locus_tag="VHX39_16245"
     CDS             <1..808
                     /locus_tag="VHX39_16245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014413489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3992721.1"
                     /translation="DIAGRTNLLALNATIEAARAGEAGKGFAVVAGEVKALASQTAHA
                     TAEISTQIAAIHTATGDAVGAVRAVGAAIGEVSEVATAIAAAVERQAAATRNIAASVQ
                     TVTVTTQQSTSAIREVSSIAVDTDLTSRKVLADADQIATGAHSLQNEVTEFLRVMAST
                     DEVNLRRYERIAGNGATAGVRVPGGAVQRVVIADISRGGVSMHCDLRAEPGTELQVEL
                     PGVDRPVMARIVRFDAGMLGLAFRQNETTLLLVDQALAVIGGRAHAAAAA"
     gene            complement(887..2026)
                     /locus_tag="VHX39_16250"
     CDS             complement(887..2026)
                     /locus_tag="VHX39_16250"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3992722.1"
                     /translation="MAHPLISCDDHLDLGQLPPDLWQTRLPAALRDRAPFIAERNGLP
                     VWICDNKVWGNWAGKPRDPNAPAAPKSIYSALDRGGMTDPSERRPAHANLRLEDMDRD
                     GVETQVLFGPIFSISTEDPVLRDACYRSYNDFLGELCSAAPDRLIGVPMLPEYPEAAT
                     AELYRLARQGGTRQVNLQIANIKAPLDDPAWEGFWTALEETGIILAWHITVFVGKPSD
                     RSAGKPASVFQNTKFFMANFLEPFVDLFAWGILERHPKMKLVMAEAGTGWLPWLVEEL
                     DYRHWRLWEAKEYWADKGGIALETKPSELFRRQIYATFQEDHVAMSLIPFFGEGHLLW
                     ASDYPHPDSVWPNSRAAIERQMRDLTPEMRRKLTHDNAAALYGLA"
     gene            complement(2100..2741)
                     /locus_tag="VHX39_16255"
     CDS             complement(2100..2741)
                     /locus_tag="VHX39_16255"
                     /inference="COORDINATES: protein motif:HMM:NF012273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX3992723.1"
                     /translation="MLEIWGRKTSSNVQALMWCVGELGLAYRRHDVGHRYGGNDTAEF
                     LAMNPNGTVPVLRDADGEPLWETGAILRYLGTRYGDAPFWPNDLIMRTRIDKWAEWSK
                     INVALNFTAPIFWRVVRTAPREHDAPAIADALRLLDASLSIAEVRLTRHTYLAGDAFT
                     LADIQFGHVLYRYFDIAIDRPEYRALRRYYDRLTERPAFREHVMVSYEELRVT"
BASE COUNT          527 a          907 c          985 g          552 t
ORIGIN      
        1 cgacatcgcg ggccgcacca atctgctggc actgaacgca acgatcgagg cagcccgggc
       61 cggtgaggca ggcaaggggt tcgctgtggt cgccggtgaa gtgaaggcac tggcgagcca
      121 gaccgcacac gcaaccgctg agatttcgac gcagatcgca gcaatccata ccgcgaccgg
      181 cgatgccgtg ggtgccgtgc gtgccgttgg cgcagcgatc ggcgaggtca gtgaggtcgc
      241 aacagcgatt gccgcagcgg tggagcgcca ggccgcggcc acccgtaaca tcgccgccag
      301 cgtgcaaacc gttacggtca caacgcagca atcaaccagt gcgatacgcg aggtctcgag
      361 cattgcggtg gataccgacc tgaccagccg gaaggtgctg gcggacgcgg atcagatcgc
      421 cacgggcgcc cactcgctgc aaaatgaggt cactgaattt ctgcgcgtga tggccagcac
      481 cgacgaagtg aacctgcgcc gctacgagcg gattgccggc aatggagcga ccgccggcgt
      541 gcgcgtgccg ggtggtgcgg tgcaacgcgt ggtgattgcc gatatttccc gcggcggcgt
      601 gtcgatgcat tgcgatctgc gggctgagcc gggtaccgag cttcaggtcg aactgcccgg
      661 cgtggatcgt ccggtcatgg cccgaatcgt gcggttcgat gccgggatgc tcgggctggc
      721 gttccggcaa aatgagacaa cgttgctgct tgtggatcag gcgttggcgg tgatcggcgg
      781 ccgcgcgcat gcggccgccg cggcgtgatt actgatttcg taacggtctc ggctgcggta
      841 cctggctgtt gttcagcggc atgcggcgat ggttcggttg ccagccctaa gccagcccgt
      901 acaacgccgc cgcattgtcg tgcgtcagct tccgccgcat ctcgggcgtc agatcccgca
      961 tctgccgctc gatcgcggcg cgcgagttcg gccagacgct gtcgggatgc gggtaatccg
     1021 aggcccacag caaatgccct tcgccgaaaa acgggatcag ggacatcgca acatgatcct
     1081 cctggaacgt cgcgtagatc tgccggcgga acaattcgct cggtttcgtt tcgagcgcga
     1141 tgccgccttt gtcagcccag tactctttgg cctcccacag ccgccagtgc cggtagtcga
     1201 gttcctcgac caaccagggc aaccagccgg tgccggcctc ggccatcacc aacttcatct
     1261 tcggatgccg ctcaaggatg ccccaggcga acaggtcgac gaacggttcc aggaagttgg
     1321 ccatgaagaa tttggtgttt tggaacacgc tggcgggctt gccggcgcta cggtcggagg
     1381 gtttgccgac gaaaacggtg atgtgccagg ccaggatgat cccggtttcc tccaacgcgg
     1441 tccagaaacc ctcccacgcc ggatcgtcga gcggtgcctt gatgttggca atctgtagat
     1501 tgacctggcg ggtgcctccc tggcgcgcga gccggtagag ttcggcggtt gctgcctcgg
     1561 gatattccgg cagcatcggc acgccgatca gccggtccgg ggccgccgag cacagctcgc
     1621 cgagaaagtc gttataggac cggtagcagg catcgcgcag cacgggatcc tcggtgctga
     1681 tcgagaagat cggtccgaac agcacctggg tttcgacccc gtcgcgatcc atgtcctcca
     1741 ggcggagatt ggcatgggcc ggccggcgtt cggagggatc ggtcatgccg ccgcgatcga
     1801 gtgccgaata gatcgacttc ggtgcggcgg gggcattcgg atcgcggggt ttgccggccc
     1861 agttgcccca gactttattg tcgcagatcc agacgggcag gccgttgcgc tcggcgatga
     1921 agggtgcgcg gtcacgcagc gcggccggca ggcgggtttg ccagaggtcc ggcggcagtt
     1981 gccccagatc gagatggtcg tcgcaggaaa tcaatggatg agccacgggg tcctcctgtc
     2041 aaaccttggt ttggccggat cctacgccac cgtgtccggc ttgtcgccct tgcttagggt
     2101 cacgtcaccc tgagctcctc ataggacacc atcacatgct cccggaacgc tggcctttcg
     2161 gttagccggt cgtagtagcg gcgaagggcg cgatattcgg ggcggtcaat cgcgatatcg
     2221 aagtaacgat acagcacgtg accgaactga atgtcggcga gggtgaacgc gtccccggcg
     2281 aggtatgtgt ggcgtgtcaa ccggacttcg gcgatgctga ggctggcgtc aagcaggcgc
     2341 agcgcgtcgg cgatcgccgg cgcatcgtgc tcgcgcggcg cggtacgcac cacgcgccag
     2401 aagatcggtg cggtaaaatt cagcgccacg ttgatcttcg accattcggc ccatttatcg
     2461 atccgcgtgc gcatgatcag gtcgtttggc cagaacggtg cgtcgccgta tcgtgtgccg
     2521 agatagcgca ggatggcccc ggtctcccac agcggttcac cgtcagcatc ccgtagcacc
     2581 ggaacggtcc cgttcggatt catcgccagg aattccgcgg tgtcgttgcc gccgtaccga
     2641 tggccaacgt catggcggcg gtaagcaagt cccagttcgc cgacacacca catcaatgcc
     2701 tggacattgg atgaggtctt gcgcccccag atttccagca tcgacgttgt ctccttgtcg
     2761 caatggctga attgtaacgc gcactgccct ggtgactatc caggtcatag gtaaccggcc
     2821 tctgtccgcg cgatgcggtt tgtggacacg gtttgccgcc gcgtcggacc atcgattgac
     2881 gttggcccac tccggcggcg agcgtaatcg cctgagcagt acgacccgga gacgcaagat
     2941 gcttcagcaa tatgccatgc cgatggccga g
//
LOCUS       DATAVD010000847         4270 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_82032, whole genome shotgun sequence.
ACCESSION   DATAVD010000847 DATAVD010000000
VERSION     DATAVD010000847.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4270
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82032"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..871)
                     /locus_tag="VHX39_16260"
     CDS             complement(53..871)
                     /locus_tag="VHX39_16260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010513446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX3992724.1"
                     /translation="MDTMLVFDRAAVRRHRDRAAATIGSVEDLLRDGAERLLDRLDDM
                     TGLFGRALDIGGRGVVAPLLRARGITVVSTDLSLPMARLSDRPVVADEEFLPFAEASF
                     DLVVASLSLHWINDLPGALIQLRRTLKPDGLFLASMPALGSLAELRTALTEAELAFSG
                     GASPRVSPFPDVPDCAGLLQRAGFSAPVVDVEEIVVRYAEPLQLLRDLRKAGETNAVR
                     TRSRNVPPSALFPAALARMQGEDGRVPVTMRLAMMTGWVPATSASPEKISPSDR"
     gene            complement(1025..1423)
                     /locus_tag="VHX39_16265"
     CDS             complement(1025..1423)
                     /locus_tag="VHX39_16265"
                     /inference="COORDINATES: protein motif:HMM:NF015581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HEX3992725.1"
                     /translation="MAREGLISLPSARPVAELLNRLEAALAAKRITVFARIDHAAGAA
                     SVGMKLRPTSVLIFGNPQAGTPLMQADQQIGLDLPLRVLAWQDAEGRSWLTYHDPAWL
                     VRYHGVDPGTLPQVPAITTLLHALASDAAG"
     gene            1595..3163
                     /locus_tag="VHX39_16270"
     CDS             1595..3163
                     /locus_tag="VHX39_16270"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX3992726.1"
                     /translation="MQQIDAKTLYGWLSDGQELAILDAREDGEFGADHLFWAVPFGMA
                     HRETRAQTLLPRKSVRICVTDDGGRLAADLAGWLEANGYTNVAVLGGGTKAWKAAGHV
                     IFSGMNVPSKAFGEWVEHHYGTESVDPPELKQWIDSGRNMIVLDSRTQEEFTRMSIPT
                     GIPMPGAELAYRIGDLAPDPETLVVVNCAGRTRSIMGAESLRRAGIPNKVVALRNGTM
                     GWELAGLQCEHGRPERFVPGTPRTAALALQRATAFAASSGVQEISPAQLAEFEADKTR
                     TLYVLDARDPSEYRAGHRKGSHNAPGGQLVQGTDNWVAVRGARIVVVDDTGVRARMSA
                     AWLRQMGNKDVFVADNALGSETGSGLPDLAPQAPTIGAAALATREAGTAVIDLARSID
                     FRAGHIEHAIWGVRGRLGPVVAKLASARRIVLTSPDGSMARFAHAEVKAMTTAEIVVL
                     DGGTAGWRAAGHPVVADKTNPPDDACIDFYLRAYDRNSGVEEAMNAYLTWEIDLVNEI
                     QRDGTIAFGSSTAH"
     gene            3135..3992
                     /locus_tag="VHX39_16275"
     CDS             3135..3992
                     /locus_tag="VHX39_16275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012552971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEX3992727.1"
                     /translation="MRSEAPPRTDRFHVSRLGSIAAAALDLLLPPTCVLCSVAVDAPG
                     LLCGPCFGELTAAGEPCCLCCGVPFDLAWHAAEGGLCQRCIDSPPPFEHARAALLYDN
                     ASRRLVLPFKHGDRIEFAAILARLMLRSGAGLLHQADVLVPVPLHRRRLFVRRYNQAA
                     LLAQALGSMTGRPVLVDALARVAATQNLDGKSAAERRDEVATAFAVRSRRVHELQGQR
                     VLLIDDVMTSGATAGACSESLLTAGAAAVDVLVAARVPDPRRNDRFLRGSYRRRKHSA
                     ATGDDDRPA"
     gene            complement(4009..>4270)
                     /locus_tag="VHX39_16280"
     CDS             complement(4009..>4270)
                     /locus_tag="VHX39_16280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992728.1"
                     /translation="AAWPDTTAPQRLIQIKAPASIGWQPRLRQTFEMETPPMTTMTMP
                     TTVAEVQPKTARGGSQLLPFLLAMVFLMAAGVGSILISGPMH"
BASE COUNT          754 a         1402 c         1377 g          737 t
ORIGIN      
        1 ttctgagcga cgaggaattt gccaccaaga aagcgcaatt gctggcgcgg ctctaacggt
       61 cggacgggct gattttctcc gggctggcgc tggttgccgg tacccatccc gtcatcatcg
      121 ccagccgcat ggtcaccggg acacgcccgt cttcgccttg catccttgcc aaggctgccg
      181 gaaacaacgc cgacggcggt acgttcctcg aacgcgtccg cactgcgttg gtctccccgg
      241 ccttgcgcaa atctcgcaac aattgcaaag gttccgcgta acgcacgaca atttcttcaa
      301 catcgaccac cggtgcggaa aacccggcgc gctgcaacaa cccggcgcaa tccggaacat
      361 cgggaaacgg cgataccctt ggcgaggcgc cgcccgaaaa tgccagctcc gcttctgtca
      421 acgcggtccg taattcagcc aaactcccca atgccggcat cgacgccagg aacaacccgt
      481 ccggcttcag cgtacgccgc aactggatca gcgctccggg caaatcgttg atccaatgca
      541 atgacaggct cgccaccacc agatcgaacg aagcctcggc gaacggcagg aattcctcgt
      601 ccgccacgac cggccggtca ctcaatcgcg ccatcggcaa tgacaggtcg gtcgacacaa
      661 ccgttatccc acgcgcgcgc aacaatggag cgaccacacc acggccgccg atatccagcg
      721 cccgaccgaa caagccggtc atgtcgtcca gccggtcgag cagccgctcg gcgccgtcac
      781 gcagcaggtc ctcgaccgag ccgatcgttg cggcagcgcg gtcgcgatga cggcgaaccg
      841 cggcgcggtc gaataccaac attgtgtcca tggtacgacg ggcccgtgca aaaatttcac
      901 actgcggatc acgatccgct tctatggcac tccttacgcc cgcatcggat gttggaacac
      961 ggggcccagg agatgctgga aggcgggtgc gggcgtcagc cgccggagca tggcggggac
     1021 ggcatcagcc cgcggcgtcg ctcgccaacg catgcaatag cgttgttatc gctggcacct
     1081 ggggcaacgt gcccgggtcg acgccgtggt accgaaccaa ccaggcggga tcatgatacg
     1141 tcagccaact acgaccctcg gcgtcctgcc aggccaacac ccgtagcggc agatcgagcc
     1201 cgatctgttg gtctgcctgc atcaacggcg tgccggcctg gggattgccg aatatcagca
     1261 cggaagtcgg ccgcagcttc atgccgaccg aggcagcccc tgcggcatga tcgatccggg
     1321 caaacaccgt aatccgcttc gccgcaagtg cggcctcgag ccggttgagc aactccgcta
     1381 caggccgtgc ggacggcaga ctgatcagtc cctcacgcgc cattgcatcc cccgtggttc
     1441 acggcgccgg cagaaggcac gaccagcgca cggcaacttt gccacagcgg cacggtggcg
     1501 gcgagacgac caggttcgcc gtaacgcacc tcccgtagtt gccaacatcc accccccgcc
     1561 gctaccgtcg acctgccatt gggagggcgg aatcatgcaa cagatcgatg ccaaaacgct
     1621 gtacggctgg ctttccgacg gtcaggaact tgccatactc gacgcgcgcg aggatggcga
     1681 attcggtgcc gatcacctgt tctgggctgt ccctttcggc atggcgcacc gagagacccg
     1741 cgcgcagacg ctgctgcctc gcaaatccgt ccggatttgt gtgaccgatg acggcggccg
     1801 gcttgccgcc gatctcgccg gctggctcga ggccaacggt tataccaacg tcgccgtgct
     1861 cggcggcggc accaaggcct ggaaagccgc cggccatgtg attttcagcg gcatgaatgt
     1921 gccgtcgaaa gcgttcggcg agtgggtgga acaccattac ggcaccgaaa gtgtcgatcc
     1981 gccggagctg aagcaatgga tcgacagcgg ccgcaacatg atcgtgctcg acagccgcac
     2041 gcaggaggaa ttcacccgga tgtcgattcc caccggcatc ccgatgccgg gcgcggagct
     2101 ggcgtatcgg atcggcgacc tcgcccccga cccagagact ctcgtggtgg tcaattgtgc
     2161 cggacgcacg cgcagcatca tgggtgccga aagcctgcgt cgcgccggaa ttccaaacaa
     2221 agttgtggcg ctgcgcaatg ggacgatggg gtgggagctg gccggattgc aatgcgaaca
     2281 tggccgccct gagcgtttcg ttcctggcac gccgcgcacc gccgccctcg cgttgcagcg
     2341 ggccacagcg ttcgccgcct catcaggggt acaggaaatc tccccggcgc agcttgcgga
     2401 gtttgaggct gacaagacgc gtaccttgta tgtgctggat gcccgcgacc cgagcgagta
     2461 tcgcgccggc catcgcaaag gcagccacaa cgcgcccggt gggcaactcg tgcaaggcac
     2521 cgacaactgg gtagcggtgc gcggcgctcg catcgtggtg gttgacgaca ccggcgttcg
     2581 ggcccgcatg tccgccgcct ggttgcgcca gatgggcaat aaggacgtct ttgtcgctga
     2641 caacgcgttg ggtagtgaga ccggcagcgg gttgcccgac cttgcccctc aggcgccgac
     2701 gatcggtgcc gcagctctgg cgacgcgcga ggcaggcacg gcggtcatcg acctcgcacg
     2761 cagcatcgac ttccgtgccg gccatatcga gcatgcgatc tggggcgtgc gcggccggct
     2821 cgggccggtg gtggcgaagc tggcctcggc gcggcggatt gtgctgacct cgccggatgg
     2881 ctcgatggct cggttcgcgc atgccgaggt caaagccatg accactgcgg aaatcgtcgt
     2941 gctggacggc ggtaccgccg gctggcgtgc cgcgggccat ccggtggtgg ccgacaagac
     3001 caatccgccc gacgacgcct gtatcgactt ttatttgcgc gcctacgacc ggaattcagg
     3061 tgtcgaggag gcgatgaacg cgtatctgac ctgggagatc gatcttgtga acgaaatcca
     3121 gcgggatggt acgattgcgt tcggaagctc caccgcgcac tgaccgtttc cacgtctccc
     3181 gtctgggttc gattgccgcg gccgcgctcg atctgctgtt gccgccgacc tgcgtgcttt
     3241 gctcggttgc ggtcgacgcg cccggactgc tttgcgggcc ttgcttcggc gaactgacgg
     3301 ccgctgggga gccatgctgc ctgtgctgtg gcgtgccgtt cgatctggca tggcacgcgg
     3361 cggagggcgg cctgtgccag cgttgtatcg acagcccgcc gccgttcgaa cacgcccgag
     3421 cggcgttgct gtacgacaat gcttcccgcc gtttggtgct gccgttcaaa cacggcgacc
     3481 ggatcgaatt tgccgcaatc ctggcccgcc tgatgctgcg gtccggcgca ggcttgttgc
     3541 accaggccga cgtgctggtt ccggttccgc tgcatcgccg ccggctattt gttcgccgtt
     3601 acaatcaggc tgcgttgctg gcgcaggctt tgggctcgat gaccggtcgg cccgtgttgg
     3661 tcgatgcgct ggcacgggtt gcagcgacgc aaaacctcga cggcaaatca gcggcggagc
     3721 ggcgggatga ggtcgccact gcgtttgccg tgcggtcgcg gcgggttcat gaactgcagg
     3781 ggcagcgtgt cctgctgatt gacgatgtca tgacctccgg cgccaccgca ggggcctgta
     3841 gcgagagcct cctcactgca ggggcggcgg cggtcgatgt gctggtcgcg gctcgggtgc
     3901 ccgacccacg gcggaatgat cggttcctgc gagggtccta tcggcggcgt aagcacagcg
     3961 cggccaccgg cgacgatgac cgcccggcct gagcaagtgg ccgaagcgtc agtgcatcgg
     4021 cccggaaatc agaattgagc ccaccccggc cgccatcagg aataccatcg ccagcaagaa
     4081 cggcagtagc tggctgccac cacgggccgt ctttggctgg acctcggcga ccgtcgtcgg
     4141 cattgtcatg gtggtcatcg gcggcgtctc catctcgaaa gtttgtctga gccgaggctg
     4201 ccacccgatc gacgccggcg ctttgatttg aatcaaacgt tgcggagccg tcgtatcggg
     4261 ccaggccgct
//
LOCUS       DATAVD010000848         2355 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3430283, whole genome shotgun sequence.
ACCESSION   DATAVD010000848 DATAVD010000000
VERSION     DATAVD010000848.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3430283"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..627)
                     /locus_tag="VHX39_16285"
     CDS             complement(<1..627)
                     /locus_tag="VHX39_16285"
                     /inference="COORDINATES: protein motif:HMM:NF025014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein N-terminal
                     domain-containing protein"
                     /protein_id="HEX3992729.1"
                     /translation="MVCTAILRIAALLIVLLPGAAMAASAVSLDSGTGRVLTLPSAAT
                     NVFVADSKVAEVRPASPTTLFIFGVGVGRTTVAALNAAGDLVSQYDVTVQTSNFGATQ
                     AEQEILRVLPRSHIRVRALPTGLMLTGTVENPSDAAQAVAVAKAFATNKQVVENQITV
                     RSSVQITLQVRIAEMSRSLSRKLGVSWQALGNIGQIGALPAFLANLNGS"
     gene            complement(627..1490)
                     /gene="cpaB"
                     /locus_tag="VHX39_16290"
     CDS             complement(627..1490)
                     /gene="cpaB"
                     /locus_tag="VHX39_16290"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HEX3992730.1"
                     /translation="MILRVTFFALMALGLLGLGFIGYASTRPPQITAAAAAAAAKAVP
                     VMTAVLTAAQDIPAGTLLKPADLTSKQIPQKSVPVGATPDTEEERRDLYGAMVRRSMV
                     KGEIVHFTDALRPGDHGFLAAVLKGNMRAVTVGVDAITGTAGLIWPGDRVDLILTQTI
                     PDLKLPIGRRIVAETVVSDVRVIAIDQRMVEGAANSSATPDARTVTLEVNEREAQGVQ
                     VAVRLGRLSLSVRPADGGTDAGPAKGPIGTTWASDISPALGSDLQPPAPPPSQVIKVW
                     QGTDDGKDFKF"
     gene            complement(1494..2000)
                     /locus_tag="VHX39_16295"
     CDS             complement(1494..2000)
                     /locus_tag="VHX39_16295"
                     /EC_number="3.4.23.43"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEX3992731.1"
                     /translation="MLHDGLLLLSPGLKLAIAGILLLAAGHDIMTRTVPNWMPLWLGV
                     LSAALAAAEFRLVWGLGFGLTVFALCFIFWWRGWMGGGDVKLLGATAIVIAPAAAGSF
                     LLAVSLSGGILAMTYLAGRFLLPRPAMRRPTWLLPRVLRVEAWRIRHRGPLPYACAIA
                     AGTIFVLS"
     gene            complement(2094..2264)
                     /locus_tag="VHX39_16300"
     CDS             complement(2094..2264)
                     /locus_tag="VHX39_16300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEX3992732.1"
                     /translation="MDYIVSKLAGLIGDKKAVTALEYAMIASLIAVACVTIVTSLGTK
                     VSGVFSTVSSAL"
BASE COUNT          489 a          716 c          742 g          408 t
ORIGIN      
        1 cgaaccgttc aggttggcaa ggaacgccgg cagcgcaccg atctggccga tattccccaa
       61 tgcctgccaa ctgacgccaa gcttgcggga cagtgaacgg gacatttcgg cgatccgtac
      121 ctgcaacgtg atctgcaccg atgaccggac ggtgatctga ttttccacga cctgcttgtt
      181 cgtcgcaaaa gccttggcga cggcgacggc ctgggcggca tccgatgggt tctccaccgt
      241 accggtaagc atcaacccgg tgggcagcgc tcggaccctg atatgactgc gtggcagaac
      301 gcgaagaatt tcctgctccg cctgggtcgc gccgaaattg gacgtttgaa cggtaacgtc
      361 gtattgtgaa acgagatcac ccgctgcatt gagcgccgcc acagttgtgc gcccaacccc
      421 gacaccgaaa atgaacaacg tggtggggct ggcggggcgg acctcggcca ctttcgaatc
      481 ggcgacaaac acgttggtcg cggcgctggg aagcgtcagc acacgcccgg tcccggaatc
      541 aagcgatacg gcggacgcag ccatcgcggc gccgggaagt aacacgatga gcagggcagc
      601 gatgcgaaga atggcagtgc aaaccatcaa aacttgaaat ccttgccatc gtcggttccc
      661 tgccagacct tgatcacttg gctgggtggt ggtgccggcg gctgtagatc gctgccaagc
      721 gcgggggaga tgtcggaggc ccacgtcgtt ccaatcggac cttttgccgg cccggcgtcg
      781 gttcccccgt ccgcgggccg cacgcttaac gaaagccgtc ccaggcgaac cgcgacttgc
      841 acgccctgtg cctcgcgctc gttgacttcc agcgtaacgg tacgggcgtc gggtgtggcc
      901 gagctgttgg cggcgccttc gaccatgcgc tgatcgatcg cgatcacgcg aacatccgat
      961 accacggttt cggcaacgat acggcggccg atcggcaatt ttagatcggg aatggtctgg
     1021 gtcaggatca gatccacccg atcaccgggc cagatcaacc ctgccgtacc ggtgatggca
     1081 tcaacaccga ccgtgacggc gcgcatgttg cctttcagca cggcggcgag aaatccatga
     1141 tcaccgggcc gcaaagcatc ggtgaaatga acgatctcgc ccttgaccat gctgcggcga
     1201 accatggccc catagagatc gcggcgttcc tcctcggtat ccggcgtggc gccgacgggg
     1261 acgctttttt gcggtatctg tttgctggtc agatcggccg gcttcagcaa ggtgccggcc
     1321 gggatgtcct gtgcggcggt caagaccgct gtcatgaccg gcacggcctt agcggcggcg
     1381 gcggctgcgg cggcggttat ctgcggcggc cgcgtcgatg cataaccgat gaatcctagg
     1441 ccaagcaggc caagggccat cagggcgaaa aacgtgacgc gtaggatcat gggtcagctc
     1501 aacacgaaaa ttgttccggc cgcgatggcg catgcatagg gcaatgggcc tcggtggcgg
     1561 atacgccacg cctcgacgcg caggacgcgt ggcagcagcc aggtcgggcg tcgcatcgcg
     1621 ggacgcggca gcaggaagcg gcctgcaaga taagtcattg ccaggatgcc gccggacagg
     1681 ctgaccgcca aaagaaacga cccggcggcg gcgggtgcga taacgatggc cgtggcgcca
     1741 agcagtttga catcgccgcc ccccatccag ccgcgccacc agaaaataaa gcacagggcg
     1801 aaaaccgtca gtccgaatcc aaggccccag acgaggcgga attcggcagc cgcaagtgcg
     1861 gcactcagga cgcccagcca caatggcatc cagttcggta ccgtgcgggt catgatatcg
     1921 tggccagcgg ccagcagcag gatgccggcg atggcgagct tcaatccagg cgacagcaac
     1981 agcagaccgt catgaagcat ggttcacctt gttcggatat cgaacataag cacgaaagcc
     2041 agcacagcca gaattcccgt gctggcattc gcgatgtccg cagcggataa gtcttacaga
     2101 gccgagctga cggtgctgaa gacgccgctg accttggtgc cgaggctggt cacgatggta
     2161 acgcacgcaa cggcgatcaa gctggcgatc attgcatatt ccagcgcggt caccgccttc
     2221 ttgtcaccga tcaggccggc tagcttcgaa acgatgtagt ccatgtcatt agtccccttg
     2281 cctgtgttgg cttatatcgc ggtccgtttc aggatcagcc acgatatcgc gatagggata
     2341 aaaccctgcg gctgg
//
LOCUS       DATAVD010000849         3173 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1569378, whole genome shotgun sequence.
ACCESSION   DATAVD010000849 DATAVD010000000
VERSION     DATAVD010000849.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3173
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1569378"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..941
                     /locus_tag="VHX39_16305"
     CDS             <1..941
                     /locus_tag="VHX39_16305"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3992733.1"
                     /translation="VAAGKHPSGGLEAEHGQFGTGCGAVDFRAKLAWSLSENPTMLRR
                     ELAFAVAALAAGGAHAETAPESTFDRIRRSRVVRVGAVGGQAPYSVQDLATGEWRGFI
                     PAFGRDLAKALDAKAEFVETNWGNAVLDLQASKVDIFFGLNPTPQRALAIDFTHPLFN
                     NLFTLIVRPGFHPATWDALNDPSVRIALEIGTSYDQVISETCPRATFVRLKSNNDATL
                     AVQAGKADCQVLVALLALSVLKRNPAIGTLVVPKPLFTATTNAGLRREPDKTWRDFVD
                     NWIDWNRGLGRMRRMVIDSLGLVGITEADIPPEISF"
     gene            1239..2180
                     /locus_tag="VHX39_16310"
     CDS             1239..2180
                     /locus_tag="VHX39_16310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3992734.1"
                     /translation="MRAVGGISYTVEAGETVAIVGESGSGKSVGAMSILRLIPDPPGR
                     IVSGEIIFDGRDLLKLPDEAMRKLRGGEIGMIFQEPMTSLNPVLTVGRQITETLEQHR
                     GATPAVARQRARDLLGMVGIADPDRRLKQYPHQLSGGMRQRIMIAIALTCDPKLIIAD
                     EPTTALDVTIQAQILELMKDLTQRLNIALVIITHNLGVVARYANRVNVMYAGRIVESG
                     SAAAIYHDPRHPYTIALLRSVPRLDRPRQDRLDPVEGQPPDLTRLDAGCAFRPRCRFA
                     IAACAESSPALTAIGEPGHAAACFRSADIASEIGKAA"
     gene            2177..>3173
                     /locus_tag="VHX39_16315"
     CDS             2177..>3173
                     /locus_tag="VHX39_16315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3992735.1"
                     /translation="MSSPVTQLPAGPLLKVKGLHMHFPISEGMLFRRSIGQVKAIDGV
                     DFTVQRGETLGLVGESGCGKTTTGRCILRLEKPTAGEIIYDGVDLAGLAPKDLRAMRR
                     RIQVIFQDPYSSLNPRMKVGAIIEEPMKVHGTEPDPTRRRERARELLSVCGLAADFAD
                     RYPHEMSGGQRQRVGIARALALNPEFIVCDEPVSALDVSIQAQVVNLLEDLREKFGLT
                     YLFIAHDLSVVRHLCQRVAVMYLGRIVEMTDSDTLFDAPLHPYTQALLAAVPVPDPLV
                     EQTRVFRPVQGEVPSPINPPSGCVFHPRCPIAVEDCKHTRPEPREVRPGHVVACSQ"
BASE COUNT          571 a         1101 c          967 g          534 t
ORIGIN      
        1 cagttgcggc tggaaaacac ccgagcggcg gactggaagc tgaacatggt cagttcggga
       61 caggttgcgg tgcggtagac tttcgcgcga agctcgcctg gtccctcagc gagaacccaa
      121 cgatgctccg ccgcgaactg gctttcgccg tcgccgctct tgccgccggc ggcgcgcatg
      181 cggagacggc accggaatcg acgttcgacc ggatccgccg cagccgcgtc gtccgggtcg
      241 gcgctgtcgg cggccaggca ccgtattccg tgcaggacct cgccaccggc gaatggcgtg
      301 gcttcatccc ggcctttggc cgcgacctgg ccaaggcgct ggacgccaaa gccgagtttg
      361 tcgaaacgaa ctggggcaac gcggtgctcg atctgcaagc cagcaaggtc gacatcttct
      421 tcgggctgaa cccgacaccg cagcgcgctt tggcgatcga cttcacccat ccgttgttca
      481 acaacctctt caccctgatt gttcggcctg gcttccaccc cgcgacctgg gacgccctga
      541 acgacccatc cgtccgcatc gcgctggaga tcggcacgtc ctacgatcag gtgatctcgg
      601 aaacctgccc gcgtgcgacg ttcgtgcgcc tgaagagcaa taacgacgcg acattggcgg
      661 tgcaggcggg caaggcggac tgccaggtgc tggtggcgct gctggcgctg tcggtgctga
      721 agcgcaatcc ggccatcggc acgctggtgg tgccgaaacc gctgttcacc gccaccacca
      781 atgcgggatt gcggcgcgaa ccggacaaga cgtggcgcga tttcgtggac aactggatcg
      841 actggaatcg cggcctgggg cgcatgcgcc ggatggtgat cgacagcctc ggcttggtcg
      901 gcatcaccga ggccgacatc ccgcccgaga tcagcttctg acgcacgcgg atggctgcgc
      961 aacggtccga atgcgcatcg gaatgacata agtcaagcca cgcaccgtat ccacacgcgt
     1021 cttccatccc accgatcggg cacgcgtttc cccgcatggc cgtctgcgca ccaccgaacc
     1081 cgccacggaa tggtgattga caccgcattc cgcaccccga tatggagcgt tcataaaaat
     1141 aaattaacac ttcacaggga atatccggga gcgaacgttt gccgccactg ttgtccatcc
     1201 ggaatctgca caccgaattt cgtaccgggc gcggagtcgt gcgtgccgtt ggcggcataa
     1261 gctacacggt cgaggcgggt gagaccgttg cgatcgtcgg cgaaagcggc tccggcaaat
     1321 ccgtcggcgc catgtcgatc ctgcggctta tcccggatcc tcctggccga atcgtcagcg
     1381 gcgaaatcat cttcgacggc cgcgatcttc tgaaattgcc cgacgaagcc atgcgcaagc
     1441 tgcgcggcgg cgaaatcggg atgattttcc aggaaccgat gacatcgctg aatccggtgc
     1501 tgacggtcgg ccggcagatc accgagacgc tggagcagca tcgcggcgcc acccccgcgg
     1561 ttgcccgcca gcgcgcccgc gacctgctgg ggatggtcgg aatcgccgac ccggaccggc
     1621 ggctgaaaca gtatccgcat caattgtcgg gcggcatgcg ccagcgcatc atgatcgcca
     1681 tcgccctgac ctgcgatccg aaactgatca tcgccgatga acccaccacc gcgctggacg
     1741 tgacgatcca ggcccagatc ctcgaactga tgaaggacct gacgcagcgc ctgaacatcg
     1801 cgctggtgat catcacccac aacctcggcg tggtcgcccg ctacgccaat cgggtgaacg
     1861 tcatgtatgc cggccgcatc gtggaatccg gttccgccgc ggcgatctac cacgatccac
     1921 gccatcccta caccatcgcg ctgctgcggt ccgtcccgcg cctcgaccgt ccgcgccagg
     1981 atcggctgga cccggtcgag ggccagccac ccgacctcac ccgcctggac gccggctgcg
     2041 ccttccgccc ccgctgccgc ttcgccatcg ccgcctgcgc cgagtcttcg cctgctctca
     2101 ccgcaatcgg cgaacccggc catgccgccg cctgcttccg gtcagccgac atcgccagcg
     2161 aaatcggcaa ggccgcatga gcagcccggt cacgcaactg cccgccggcc ccttgctgaa
     2221 agtcaaaggg ctgcacatgc attttccgat ctccgagggc atgctgtttc gccgttccat
     2281 cggccaggtc aaggcgatcg acggtgtcga tttcaccgtc cagcgcggcg aaacgctggg
     2341 tctggtcggc gaaagcggct gcggcaaaac caccaccggc cgctgcatcc tgcggctgga
     2401 gaaaccgacc gccggcgaaa tcatctacga cggcgtcgat ctggccggat tggcccccaa
     2461 ggacctgcgg gcgatgcgcc gccgcatcca ggtgatcttc caggacccgt acagctcact
     2521 caatccacgc atgaaggtcg gcgccatcat tgaggagccg atgaaggtgc atggcaccga
     2581 acccgacccc acacggcgcc gcgaacgggc acgcgaactg ctctcggtct gcggcctggc
     2641 agcggacttc gccgaccgtt atccgcacga aatgtccggc ggccagcggc agcgggtcgg
     2701 catcgcccgc gccttggccc tgaaccccga gttcatcgtc tgcgacgaac ctgtctccgc
     2761 gctggacgtg tcgatccagg ctcaggtggt caatctgctg gaggatttgc gggaaaaatt
     2821 cggcctgacc tatctgttca tcgcccacga cctgtccgtg gtgcggcatc tgtgccagcg
     2881 cgtcgcagtg atgtacctgg gccgtatcgt ggagatgacc gacagcgaca cactgttcga
     2941 cgcgccactg catccgtata cacaagccct gctggcggcg gttcccgtgc cggatccgtt
     3001 ggtggagcag acccgggtgt tccgccccgt gcagggcgag gtgcccagcc cgatcaaccc
     3061 gccttccggc tgcgtctttc atccgcgctg cccgatcgcc gtcgaagact gcaagcacac
     3121 acggcccgaa ccacgcgaag tgcggccggg ccatgtcgtc gcctgcagcc agg
//
LOCUS       DATAVD010000850         6833 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2311715, whole genome shotgun sequence.
ACCESSION   DATAVD010000850 DATAVD010000000
VERSION     DATAVD010000850.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6833
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2311715"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..353)
                     /locus_tag="VHX39_16320"
     CDS             complement(<1..353)
                     /locus_tag="VHX39_16320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992736.1"
                     /translation="MASSLDHIEKTLADAYRKEIDQEENIWRSLPFFAATLALELGAI
                     YQIAGHLPPVGTGAWRGSVGCIVVAALATLTALGFLTASIYPARFSYISPGPELLTYA
                     SELDETEAQRIASKDS"
     gene            573..1433
                     /locus_tag="VHX39_16325"
     CDS             573..1433
                     /locus_tag="VHX39_16325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992737.1"
                     /translation="MLDRSALRDFRPLIMTPSHDGTFCFTYVASVIQLMAAAATIGLP
                     INFMFQAGDSLVTRARNHLVALFLSEPQWTHLMWIDADIGFSPEAFYRLLLSGHDIAA
                     GVYPLKREDWPEEGVPLGTTERDFRQLYTRYTVNAGQAADPHVGLEIDADGFMAVREA
                     PTGFMLIKRHVFDRLRQAHPELGYKPDMIGSIDPSLYYRFFDVSMDPETGRYLSEDYT
                     FCRRWEAMGGKVYVDANSNLAHQGGKIYRGDFAGSLVRDVRYAVTAPVGMSYVLNGLG
                     HLKPNPPCAV"
     gene            complement(1478..2272)
                     /locus_tag="VHX39_16330"
     CDS             complement(1478..2272)
                     /locus_tag="VHX39_16330"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX3992738.1"
                     /translation="MSEELLLSVENGVAVFILNRPERLNALTRGMLSGLQTHLAAVAE
                     DPDVGCVVLTGNGRAFCSGGDVKVQAAVAGKSEQSPEQRSDQLRASMEASRLLRDMPK
                     PTIAMVNGVAAGAGMSLALACDLRIAGESARMTTAFAKVGLSGDYGGTYFLTQLVGPS
                     KARELYLTAEMLDASRLLALGMVSRVVPDAALVAETMALAGQFASGPRVAYRYIKRNI
                     KAAEEGTLSDALDSEAYGMLRCRDSVDHAEAAQAFVEKRAPVFTGR"
     gene            complement(2269..3990)
                     /locus_tag="VHX39_16335"
     CDS             complement(2269..3990)
                     /locus_tag="VHX39_16335"
                     /inference="COORDINATES: protein motif:HMM:NF004807.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HEX3992739.1"
                     /translation="MLYHPAKASGQATEGPNHRRERPMKAADAIVEVLKREGVNTLFC
                     FPTTSIIENAVAAGIRPIICRQERVGVDMADGYARVTDGRPPGVFAMQYGPGAENAFP
                     GIATTYSDSVPVLFLPLAQSRDQSQVYPIFMANRTYASVTKQVEEIRLPESVPAVMRR
                     AFSALKNGRAGPVMVEVPRDVVGLDIGTDQLDYTPVRPTVSAPDPHDADQAAKLLIDA
                     RCPVILAGQGVLYAQASAELVELAELLQAPVMTTVDGKSAFPEDHALSLSSGGNTFSG
                     PGRLFLYTKADLIFGIGTGLNLHPLTTPPLPKNARIIHATNDPRDLHKTHNTEVALLG
                     DAKLTLAAVIEAVKDRLGGKLPNRSPAAEIAAERAAWLGRWEAKLNSKESPITPYHVM
                     SEFMRVVDPAGAIVTHDSGSPRDQLLPFYRATKPRGYLGWGKSHQLGTGLGFAIGAKV
                     AAPDKFCVNFMGDAAFGMTGLDFETAVRCGIPHLTIVLNNSTMAIEIPHMKLSHDKHK
                     SRDLGGNYAALARELGGWSERVANPDDVANAILRAKSKTEDGHTCLLEFVTSAETAFS
                     HRGGAAA"
     gene            4126..4917
                     /locus_tag="VHX39_16340"
     CDS             4126..4917
                     /locus_tag="VHX39_16340"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3992740.1"
                     /translation="MIHHVVTGNGRPPIVFIHGFGCAHSDWNSQVAHLAPRHQTIAVD
                     LRGHGASPGEAADCSVERYGADVAEVMRAMALPPAVLVGHSMGCRVAIEAALQAPSQT
                     AGLVLVDGSQFAAAMEPVLMQRFATPDGYETLTKVLFNDMFTARSDPAVAAAVVERAF
                     RLPRSTGVKMLTDMLRYDVGRLTGSLACVRVPVMALQTTFSNERRERTTMRKGQTTPY
                     LEMLRTTVPLVRVEIIEETGHFPQLDESAQTNALIDSFLATVPAQ"
     gene            complement(4924..6009)
                     /locus_tag="VHX39_16345"
     CDS             complement(4924..6009)
                     /locus_tag="VHX39_16345"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3992741.1"
                     /translation="MKRSDDVHKLAHDFNNLLTAIIGATDAILQRSAIDPETCADIAH
                     IREGARRGSTLVGRLRGTTQDAAEPPGIISVNETIRATWRLLDHGLGQNIALVLDLRE
                     PGAQVAIDPSQLDRALLNLIANARHAMPNGGPVTLGTSRRTVAVTESRLPDTIPPGDY
                     VVIVVEDGGGGIPRDRIPRIFDAGFSSRRRTGGSGIGLPSTHEIVHQANGFLAVESTE
                     GLGTRFEIHLPCVASVPVVPPCVALSTAPTVLLVEDDLLVRNVTERTLHRAGWNVLCA
                     LSAEDALEMLQEAKCDLMISDIALPGMNGVALARLVQTRLPAMPVILTSGYQRAAMDD
                     AGNVVFLTKPYDQTELLEAITQAAARP"
     gene            complement(6006..>6833)
                     /locus_tag="VHX39_16350"
     CDS             complement(6006..>6833)
                     /locus_tag="VHX39_16350"
                     /inference="COORDINATES: protein motif:HMM:NF013479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EscU/YscU/HrcU family type III secretion system
                     export apparatus switch protein"
                     /protein_id="HEX3992742.1"
                     /translation="LFHEIGMVFLGTIAPFVVPIGLGAVAATLLQTRFSLRSSALRAD
                     LGRLSPGRGWKRSFGSDSLVETAKSLAKLLIVGGAVAKVLYQELPKLENLAAVPLNVL
                     LNLLSSVVIRLLLAVVLAQLVIAGADMFWLWRQHLRQLRMSRSDIKDETKETDGDPAI
                     KMRIRRLRMRRARQRMLAAVPKATVVVTNPTHYAVALSYDVKKSSVPRLVAKGVDTLA
                     ARIRDTAREHGVPIVANPPLARTLHELPLGSPIPPELYKVVAELIAYVWRLSGRRRA"
BASE COUNT         1284 a         2196 c         2074 g         1279 t
ORIGIN      
        1 gaatccttgc ttgcgatgcg ttgtgcctcg gtttcgtcta actcactggc gtatgtcaga
       61 agttccggcc cgggcgagat gtagctgaat ctggccggat aaattgacgc cgtgagaaac
      121 ccgagcgcgg tcagcgtcgc caacgccgcc accacgatgc aaccaaccga cccgcgccac
      181 gcacccgtgc cgaccggtgg caaatggccg gcgatctggt aaatcgcgcc cagttccagg
      241 gccagcgtgg cggcaaaaaa cggcagcgag cgccagatgt tctcttcctg gtcgatctct
      301 ttgcggtagg catcggccaa agtcttctcg atgtggtcaa ggctggacgc catgacctcg
      361 acgctgccga aaatacctta ccgtcccgtg aacaccggtg cctgtttctc cacgaatcca
      421 cgcgctgcct cgacgtgatc agcggtctcc cccgcaagcg cgccgccggt cctcgcctcc
      481 aaaatgagcc gcccatcagc atttactttg caacccacac gtgtattgct acggtgatgg
      541 cagtggtgtg cgtttcaacc ggcaaggttc ccatgctcga ccgctcggcg ttacgcgact
      601 tccggccgct gatcatgacg cccagtcatg acgggacgtt ttgctttacc tatgtggcga
      661 gcgtgatcca gttgatggcg gcagcggcta ccatcgggct gccgatcaac ttcatgttcc
      721 aggccggcga cagcctggtg acgcgggctc gcaaccatct ggtggcgctg ttcctgtccg
      781 agccgcagtg gacccatctg atgtggatcg acgccgatat cggcttctcg ccggaagcgt
      841 tttaccggtt gctgttgagc ggccacgaca tcgccgccgg cgtgtatcct ctgaagcgcg
      901 aggactggcc cgaggaaggc gttccgctcg gcaccacgga gcgcgatttc cgccagctct
      961 atacgcggta cacggtcaat gccgggcagg ccgctgaccc gcatgtcggg ctcgagatcg
     1021 acgccgacgg tttcatggcg gtgcgtgagg cgccgaccgg gttcatgctg atcaagcgac
     1081 acgtgttcga ccggctccgc caggctcatc ccgaactggg ctacaagccc gatatgatcg
     1141 gctcgatcga cccgagcctg tactaccgat tcttcgatgt ctcgatggac ccggagaccg
     1201 gccgctatct gtccgaggat tacacgttct gcaggcggtg ggaggcgatg ggcggcaagg
     1261 tatatgtcga cgccaactcc aacctcgcgc accagggcgg caagatctac cgcggcgact
     1321 tcgccggttc gctggtgcgg gacgtgcgct acgcggtcac ggccccggtt ggcatgagtt
     1381 atgtcctgaa cggcctgggc cacctgaaac ccaatccgcc gtgtgcggtg tgaggcctac
     1441 tgacttgacg aatgacctcg ctactgccga agcaacgtta cctccccgtg aataccgggg
     1501 cccgtttctc cacaaacgcc tgcgccgcct ccgcgtgatc gacagagtcc cggcagcgca
     1561 acatgccgta cgcttcagaa tccaacgcgt cagataacgt gccttcttca gcagccttaa
     1621 tgttgcgctt gatgtagcga taggccacgc gaggccctga cgcgaactga cctgccagcg
     1681 ccatcgtttc cgcaaccaaa gccgcatccg gaacgacccg ggacaccatg cccaaagcca
     1741 gcagacggga tgcgtccagc atctcggcgg tcagataaag ttcgcgcgct ttcgacggac
     1801 ccaccagttg cgtcagaaaa tatgtgccgc cgtagtcgcc cgacaggcca accttggcga
     1861 aggcagtcgt cattcgtgcc gactcgccgg cgatccgtag atcgcaggcg agcgcaagcg
     1921 acattcccgc cccggccgcc acgccattga ccatcgcgat cgtcggcttc ggcatgtcgc
     1981 gcagcagccg cgacgcctcc atgctggcgc gaagttgatc ggagcgttgc tcgggcgact
     2041 gctccgattt tcccgctacc gccgcctgca ccttgacgtc gccacccgag cagaacgcac
     2101 gtccgttgcc ggtcagcacg acgcagccca catcggggtc ctcagccacg gcggcaaggt
     2161 gtgtctgcaa tccagacagc atcccgcggg tcagcgcatt cagccgctcc ggccggttga
     2221 gaatgaaaac ggcaacgcca ttctcaaccg acagcaacag ttcctcgctc atgccgcggc
     2281 accgccgcgg tgcgagaacg cggtctcggc gctggtgacg aattccagca ggcaggtgtg
     2341 gccgtcctcg gtcttgcttt tcgcacgcag gatcgcgttg gcgacatcgt cgggattggc
     2401 gacccgctcg ctccagccgc caagctcgcg tgccaacgcg gcgtagttgc cgcccagatc
     2461 gcgcgattta tgcttgtcgt gagacagttt catgtgcgga atttcgatcg ccatcgtgga
     2521 gttgttcagc acgatggtca gatgcgggat gccgcagcgg accgcggttt cgaaatccag
     2581 gcccgtcatg ccgaacgccg cgtcgcccat gaagttgacg cagaacttgt ccggtgcggc
     2641 aaccttggcg ccaatggcga acccgaggcc ggtgccgagc tggtgcgact taccccagcc
     2701 cagatagccg cgcggtttgg tggcacggta gaacggcagc aactgatcgc gcgggctgcc
     2761 cgagtcgtga gtaacgatcg ctcccgccgg atcgaccacg cgcatgaact ccgacatcac
     2821 gtgatacggc gtgatcggcg attccttgga gttcaacttt gcctcccagc ggcccagcca
     2881 ggccgcgcgt tcggcggcga tctccgcggc gggcgagcgg ttgggcaatt tgccgccaag
     2941 ccggtccttc actgcctcga tcaccgcggc caacgtcagc ttcgcatcgc cgagcaaggc
     3001 gacctcggta ttgtgcgtct tgtgcaggtc gcgcggatcg ttggtggcgt gaatgatgcg
     3061 tgcgttcttt ggcaatggcg gcgtggtcag aggatgcaga ttgagcccgg tgccaatgcc
     3121 gaagatcagg tccgccttgg tatacaggaa caaccggccc ggcccgctga acgtgttgcc
     3181 gccggagctt agcgacagag cgtggtcctc gggaaaggcg ctcttgccgt ccacggtggt
     3241 catcaccggc gcctgcagca attccgccaa ttccaccagc tccgccgacg cctgggcgta
     3301 gagcacgccc tgaccggcca ggatgaccgg gcagcgtgca tcaatcagaa gttttgccgc
     3361 ctgatcggca tcgtgcgggt cgggagcgga cacggttggg cgaaccggcg tgtagtcaag
     3421 ctggtcggtg ccgatgtcca ggccgacgac atcgcgcggc acttcgacca tgaccgggcc
     3481 ggctcggccg ttcttcagtg cgctgaaggc gcgccgcatc accgccggaa cggattccgg
     3541 cagccggatt tcctccacct gcttggtgac cgaggcgtag gtgcggttcg ccatgaaaat
     3601 cggataaacc tgcgattggt cacgcgattg tgccagcggc aggaacagca ccggcacgct
     3661 gtccgagtag gtcgtggcaa tgccggggaa tgcgttctcc gcgcccggtc cgtactgcat
     3721 cgcgaacacg ccgggtggac gcccatccgt gacacgagcg taaccgtcag ccatatcgac
     3781 gcccacccgt tcctgccggc agatgatagg gcgaatgccc gctgcgacgg cgttctcgat
     3841 gatcgaggtg gtggggaagc agaacagcgt gttcacgcct tcccgcttca ggacttcaac
     3901 gatggcgtcg gcggctttca tgggacgctc ccttctgtgg tttggccctt ctgtcgcttg
     3961 gccagatgct ttggccggat gatagagcat gtcccggccg gatgcgaaag cacgcctccg
     4021 tttagaggtc agacttgtca gaactgccgc cccgcagcag tttgccgacc gaaccagctg
     4081 cctgcggata tcggcagcga gcaactttcg ggggcggaaa tgtcattgat ccaccacgtc
     4141 gtgaccggca acggccggcc tcccattgtc ttcatccacg gcttcggctg cgcgcattcc
     4201 gattggaaca gtcaggtcgc gcatcttgcg ccacgccacc agaccatcgc cgtcgatctt
     4261 cggggccatg gtgcaagccc gggtgaagcc gcagactgct cggtcgagcg ctacggcgcc
     4321 gatgtcgccg aggtgatgcg cgccatggcg ctgccgcccg cggtgttggt cgggcacagc
     4381 atgggatgcc gcgtggcgat tgaagcggcg cttcaggcgc cgtcacaaac ggcgggtctg
     4441 gttctcgtcg acggcagcca gttcgctgcc gcaatggaac cggtgctgat gcagcgcttt
     4501 gccacgccgg atggctacga aacgctcacc aaagtcttgt tcaacgacat gttcacagcc
     4561 aggagcgatc cggccgttgc cgctgcggtg gttgagcgcg cctttcgctt gccgcgctca
     4621 acgggtgtca agatgttgac cgatatgctg cgctacgacg tcggacggct gaccggttcg
     4681 ctggcctgtg tgcgcgtgcc ggtcatggcg ctgcaaacga cgttcagcaa cgaaaggcgt
     4741 gagcgaacga ccatgcgcaa gggacaaacc acgccctatc tggagatgct acgcaccact
     4801 gtgccgttgg ttcgcgtcga gatcatcgag gagacgggcc acttcccgca actcgacgaa
     4861 agcgcgcaga ccaatgccct gattgacagt ttccttgcca cagtgccggc acaatagcgg
     4921 aatttagggt cttgctgcgg cctgcgtgat cgcttcgagc aattctgtct ggtcatacgg
     4981 cttggtcagg aaaacgacgt tgcccgcgtc atccattgcg gcacgctgat atcctgacgt
     5041 gaggatgacc ggcattgccg gcagccgtgt ctgcacgagc cgagccaggg ccacaccgtt
     5101 catgccaggc aatgcgatgt ccgaaatcat caggtcgcat ttcgcctcct gcagcatctc
     5161 gagcgcatct tccgccgaaa gcgcacacag cacattccag cctgcccggt gcagggtccg
     5221 ttcggtgacg ttacgcacca acaggtcatc ttcgaccaac aacaccgtag gcgcggtgct
     5281 cagcgcgacg cacggtggca cgaccggcac actcgcaacg cacggcaaat ggatttcgaa
     5341 tcgtgtgccc agaccctcgg tactttcaac ggcgagaaag ccatttgcct ggtggacgat
     5401 ttcatgcgtg gatggcagac caatgcctga gccgcctgtc cggcgtctcg aactgaaacc
     5461 agcgtcgaaa attcgcggta tccgatcacg aggaatacct cccccgccat cttcgaccac
     5521 gatcaccacg taatcgccgg gagggatcgt gtccggcagg cgcgattccg tgacagcgac
     5581 ggtgcggcgc gaagtgccca gagtaaccgg gccgccattg ggcatggcgt gacgtgcatt
     5641 ggcgatcaga ttcaacagcg cgcggtccag ttgcgaggga tcgatcgcca cctgtgcacc
     5701 cggctctcgc aaatccagca ccagggcgat gttttggccc agaccatgat cgagcaagcg
     5761 ccaggttgcg cgaattgttt cattaaccga aatgatacca ggaggctccg cagcatcctg
     5821 tgtcgtccca cgtagacgtc ccaccagcgt cgatccgcgg cgggcaccct cgcggatatg
     5881 ggcaatatcg gcgcaggttt ccggatcgat cgcagatcgt tgcaaaatag cgtcagttgc
     5941 accgataatt gcggttaaca aattattaaa atcgtgcgcc agcttatgca cgtcgtcgga
     6001 gcgtttcatg cccggcgccg cccgctgagc cgccaaacgt aagcaatcag ttcggccaca
     6061 accttgtaca gctccggtgg aataggtgat cccaaaggta gttcatgcaa ggtgcgcgcg
     6121 agcggcggat tggccacgat cggtacccca tgttcgcgcg cggtgtctcg gatccgagca
     6181 gccaaggtat caacgccttt ggcaaccagc cgcggcacac tgctcttttt aacatcatag
     6241 ctcagggcga ccgcgtagtg cgtaggattc gtcaccacca ccgtcgcttt cggcacagcg
     6301 gccaacatcc gttgccgtgc gcgccgcatg cgcagccgcc gaatgcgcat tttgatcgct
     6361 ggatcgccgt ccgtctcctt ggtttcgtct ttgatgtcgg accggctcat gcgcaattgc
     6421 cgcaggtgct gccgccacag ccagaacatg tcggcgccgg caataaccag ttgtgccagc
     6481 acgaccgcga gcagcagccg gatcacaacg gacgacagca aattcagcag cacattcagc
     6541 ggcactgccg ccaggttctc gagtttcggc aactcctggt acagcacctt ggcgaccgca
     6601 ccgccgacaa tcagcagttt agccagtgac ttcgcggttt ccacgaggct gtcgctacca
     6661 aaactccgct tccagccccg gcctggcgac agccgcccga ggtcggcacg caacgcactc
     6721 gagcgcaaac tgaaccgcgt ttgcagcagg gttgccgcaa cggcgcccag accgatcggc
     6781 accacgaatg gggcgatcgt gccgaggaag accatgccga tttcatgaaa cag
//
LOCUS       DATAVD010000851         2680 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2872611, whole genome shotgun sequence.
ACCESSION   DATAVD010000851 DATAVD010000000
VERSION     DATAVD010000851.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2680
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2872611"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1173
                     /locus_tag="VHX39_16355"
     CDS             <1..1173
                     /locus_tag="VHX39_16355"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX3992743.1"
                     /translation="NRFLDFASGIAVCSTGHAHPQVVQAIKDATDDFLHISSDYWHER
                     MTRLGERINSLAPMSEPVQVLVCQSGTESVEGALKLARYVTGRPRFIGFLGGFHGRSM
                     GSLSFTASKYTQQAGFFPTMPGVTHVPYPNTYRPLFAGADQGKAVLDYMETMLFQCNV
                     PPSEVAAILVEPIQGEGGYLVPPDGFLQGLRDLCDRHGILLIFDEVQSGIGRTGRMFA
                     SQHWGVSPDIMTLAKGLGSGLPIGLTVACRRHMEKWKRGAHGNTYGGNPVTCAAALAT
                     LDLVEHEYTANAASVGEYFMGRLRELQSRFGCIGDVRGKGLMLGMELVEDRVSRKPAR
                     VLADRVLTRAFHNGLLLLSCGVSTVRFIPPLMINRAHVDEAMVLLEAALTEALAPA"
     gene            1190..2557
                     /locus_tag="VHX39_16360"
     CDS             1190..2557
                     /locus_tag="VHX39_16360"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX3992744.1"
                     /translation="MADTAPSETRALGFWSCTALVVGNTIGVGIFLTPASLAPYGLNA
                     LYAWLITLVGCGFLAIVFSGLARTFPGDDGPYAYTQRAFGRGTSFYVMWCYWFSTWVT
                     NATIATGVVGYLTILVPGMQATTWLQPTVALGMLWFFVLINCLGIRTAAWVQMVTTVL
                     KLLPQAGIIILGVWQLFLHPSVYVAHVPPNPASWHEMLAASTIALYAMLGIECATIPA
                     GRVIDPGRTIPRATIIGTLVTALIYLCISIVPMLLMPQAQLSNSNAPFADLIGQYLGP
                     QYGRWLALFVVIGGLGCLNGWTLVVGELTRTFALHGDFPAAVGKVNARATPMRAFVLT
                     GVAASITLWFNYDPSMTKVFTFLSVLVTASNLPLYLAGSVGVLVLWRQGKIGRVGRRE
                     IVWICAAPLAAVYCVWAFAGSGAKPLLWGLALAAAGIPFHLWSIRARRSRPAASEGEK
                     SPVIS"
BASE COUNT          422 a          803 c          867 g          588 t
ORIGIN      
        1 aaccgctttc tggacttcgc atccggaatt gcggtctgca gtacgggtca cgcgcatccg
       61 caggtggtgc aggcgatcaa ggacgccacg gacgattttc tccacatctc gagcgactat
      121 tggcacgagc gcatgacccg gctcggcgag cggatcaatt cactggcgcc gatgagcgag
      181 ccggtgcagg tactggtctg ccagagcggt accgagtctg tcgaaggcgc gctgaagctc
      241 gcccgctacg tcacgggccg gccgcgcttc atcggttttc tcggcggttt tcatgggcgc
      301 tccatgggct cgctgtcgtt caccgcgagc aagtacacgc agcaggccgg cttttttccg
      361 accatgcccg gtgttacgca cgtaccttat ccaaacacct accgccccct gttcgcgggc
      421 gcggaccagg gcaaggcggt gctcgattac atggagacga tgctatttca gtgcaacgtc
      481 cccccgagcg aggtggcggc gatactggtc gagccgatcc agggcgaggg cgggtacctc
      541 gtgccgccgg atggcttcct gcagggactg cgcgacctgt gtgatcggca cggcattctg
      601 ctgattttcg atgaggtaca gagcggcatc gggcgcacgg gtcggatgtt cgcgagtcag
      661 cattggggcg tgtcgcccga catcatgacc ctggcgaagg ggctgggctc cggattgccc
      721 atcggtctga ccgtggcatg ccggcgccat atggaaaaat ggaagcgggg cgcccacggc
      781 aacacctacg gcggcaatcc ggtcacttgt gccgcggctc ttgccaccct cgacctggtg
      841 gaacacgagt acactgccaa tgccgcctcc gtcggagagt atttcatggg tcgcctgcgt
      901 gagcttcaga gccgcttcgg ctgtatcggg gatgtccgcg ggaagggact catgctcggg
      961 atggagctcg tcgaggaccg cgtcagccgc aagcctgcca gggtgttggc cgacagggta
     1021 ctcacccgcg ccttccacaa cgggctgctg ttactttcat gcggtgtcag tacggtgcgg
     1081 ttcattccgc cgctgatgat taatcgggcg cacgtcgatg aggccatggt gctgttggaa
     1141 gctgcgctga ccgaagcgct ggcgccggcc tgaagcggcg ccctggcgca tggcggacac
     1201 cgcaccttct gagacccggg ctctaggttt ctggtcgtgt acggccctcg tagtcggtaa
     1261 cacgatcggg gttggcattt tcctgacgcc ggcgtcattg gcgccttacg gattgaatgc
     1321 gctttacgcg tggctgatca cgctcgttgg ctgcggtttc ctggctattg ttttctctgg
     1381 tctcgcacgc acttttcccg gagacgacgg gccgtacgct tacacgcagc gtgcgttcgg
     1441 ccggggaacc tccttctatg tgatgtggtg ttactggttt tcgacctggg tgacgaatgc
     1501 cactatcgcc accggagtgg tcggatacct gacgatcctc gtgcccggta tgcaggcaac
     1561 cacgtggctg caaccgaccg tcgccctggg gatgctgtgg ttttttgtgt tgatcaattg
     1621 cctcggcatt cgcacggcgg cctgggtgca gatggtcacg accgtattga aactgctgcc
     1681 gcaggccgga atcatcattc tcggggtctg gcagctgttc ctgcatccgt cggtctacgt
     1741 cgcccacgtg ccgccgaatc cggcatcgtg gcacgagatg ttggcagcct ccaccatcgc
     1801 actctatgca atgctcggca tcgagtgcgc gaccattccc gccgggaggg tcatcgaccc
     1861 ggggcgcacc ataccgcggg cgacgatcat cgggacgctg gtgacggcgc tcatttacct
     1921 gtgcatttcg atcgtcccga tgctgctgat gccgcaagcg cagttgagta attcgaacgc
     1981 gccgttcgcc gatctcatcg gtcaatatct gggcccgcaa tacgggcgct ggctggcgct
     2041 gttcgtggtc atcggcggtc tgggctgttt gaacggttgg accctggtgg tcggcgagct
     2101 cacgcgaaca ttcgccttgc atggcgactt ccccgccgcc gtgggcaagg taaatgcccg
     2161 ggcgactccc atgcgtgcct tcgtactcac gggcgtggcg gccagcatta cgttatggtt
     2221 caactacgac ccctcgatga cgaaggtttt cacctttctc agtgtgctcg tgaccgcctc
     2281 gaatctgccg ctttacctcg cgggctcggt gggggtcctg gtgttatgga gacaagggaa
     2341 gatcggtcgc gtgggtcggc gcgagatcgt ctggatttgc gcggcacccc tggcggccgt
     2401 gtattgcgtc tgggcgttcg ccggatctgg cgcgaagccg ctgctgtggg gcctggcact
     2461 ggctgcagcg gggattccat ttcacttatg gtcgattcga gcgcgccgca gccgtcccgc
     2521 tgcgagtgaa ggtgagaaaa gccccgtaat ctcttgaatc taaatgcgta caaccctggc
     2581 ctcgggttgt gccgtgcagc atcgtttagg gccttcaaca gccccctagt ttggggggtt
     2641 gctgtcgcct gtgatccttc tgcatagtgg tgcctcgaaa
//
LOCUS       DATAVD010000852         2348 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3242326, whole genome shotgun sequence.
ACCESSION   DATAVD010000852 DATAVD010000000
VERSION     DATAVD010000852.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2348
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3242326"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1126
                     /locus_tag="VHX39_16365"
     CDS             <1..1126
                     /locus_tag="VHX39_16365"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HEX3992745.1"
                     /translation="AVCLLACMPWNPILWWQLRRLRLAIEIDCDARVLSLGYPVTGYS
                     ETLIAVGERQSASYAMTMARYGSKSFLEQRIHNMLRKKARHAGVWALALACGGFGFAV
                     CAAEIAPPKVDSVGKHSNQERPVDPQLLQGNGRSDVRALRSQILLMQAEGIADKLAEF
                     IKESQNQIGWTTQLPPMIGSIDQYRFDALRLLRQVPPITELSLIDHQGKEFLKVSRLA
                     MDVVGSGTDYSKEAKFTETVAKKIYYGPVYIRRGSDPYMTLGVAGTRFNAGVSVVELN
                     LTPMWDIVQQTKVGDQGVAYVVDAEGRVIAHPDSGVAKSLRDVSSLAQVQEARTTAST
                     GSVRMARDMNDQEVVVVSARVAGPGWLVFVELPIGEWRKM"
     gene            1430..>2348
                     /locus_tag="VHX39_16370"
     CDS             1430..>2348
                     /locus_tag="VHX39_16370"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3992746.1"
                     /translation="MKRRKFITLIGGAMIGWPVAARAQQPAKVPRIGVLLISGPEPMG
                     PFREALRDLGYAEGKNIQFEVRSAQSRVARLPELAAELVRSRVDVIVAIQTPAVYAAK
                     NATRDIPIVMMAGDPIATGLINNLARPDGNLTGLSGAAAELAAKSLELIPEMVPGAHR
                     LGVLGNANDPFMKPFLDDIQQAAPKVRLEVYQTIVGSSGELDGAFAAIAHSRADAVMV
                     QGSLSDKLAVGLALKYRLPSLSTQKSAVQAGILMSYSADLRERGHDIARYVDKILKGT
                     MPADLPVQQPTRYELAINLKTAQALALTVP"
BASE COUNT          499 a          692 c          697 g          460 t
ORIGIN      
        1 cgccgtgtgc cttctcgcct gcatgccctg gaacccaata ctctggtggc aactgcggcg
       61 gctccgtttg gccattgaaa tcgattgcga tgcccgggtc ctgagcctcg gctaccctgt
      121 tacagggtat agcgagaccc tgatcgccgt cggtgaaagg cagtctgcaa gttacgccat
      181 gacaatggcc aggtacggat cgaaatcatt cctggagcaa aggatccaca atatgctgcg
      241 gaagaaagcc agacacgctg gagtatgggc gctggccttg gcctgcggcg gcttcggctt
      301 cgctgtatgt gcggccgaaa tcgctccccc taaggtcgac tccgtcggca agcattcgaa
      361 ccaggaaagg cccgtagatc cccaattgct tcaaggtaac ggacggtccg acgttcgggc
      421 cttgcgaagc cagattctcc tcatgcaggc agagggcatc gccgacaagc ttgccgagtt
      481 catcaaggag agtcagaacc aaatcggctg gaccacgcag ttgccgccga tgataggttc
      541 catcgatcag tatcggttcg acgcgctgcg gcttctgcgt caggttcctc ccatcaccga
      601 gctgtcgcta atcgatcatc aaggcaagga atttctcaag gtatcgcgtc tcgccatgga
      661 cgtggttggc agcggcactg actactccaa ggaagcgaaa ttcacagaga cggtggcaaa
      721 gaagatctat tacgggccgg tctacatacg ccgcgggtca gacccttaca tgactttggg
      781 agtggccggt acgcggttca acgctggcgt gagcgtcgtc gaactcaatc tcacgccaat
      841 gtgggacatt gtgcaacaga ccaaggtcgg cgatcagggc gtagcttatg ttgttgacgc
      901 cgagggtcgt gtcatcgcgc atccagattc tggcgtggcc aagtctctgc gggatgtgtc
      961 atctcttgcc caggtgcagg aggcccgcac gacagcttcg acagggtcgg tccggatggc
     1021 gcgtgacatg aacgatcaag aggttgtggt ggtttccgcg cgcgtcgcgg ggcccggctg
     1081 gctggtattt gtggagttgc cgatcggaga atggagaaaa atgtgaaacc agcaagcgct
     1141 acaatcaacc agtgaactgc agatcgggta caaagctcgt tatgaatatt cctttcattc
     1201 caccgcgcat tcttgccata ccccggggag gtgattcgat aggtgtgccg gtgtccaagt
     1261 ctggtgctta gccgacatct cgggcaggct gtctaacgac ccaaacagcc ggagtaagac
     1321 gaactaccgg tgacttccga aaccgacccg actcggacat ccgccccccg ttggttacat
     1381 gctgaaaatt gtttaggctt cgcttgggta tcgggttcag gattaagcaa tgaagcggcg
     1441 caagttcatc acacttatcg gcggcgcaat gataggctgg ccagtggcgg cgcgcgcgca
     1501 gcagccggca aaggtaccgc gcatcggcgt gctcctcatc agtggcccag aacccatggg
     1561 gccatttcgc gaggcgctcc gcgatcttgg ttatgccgag gggaagaata tccagtttga
     1621 agtccgttcg gcgcaaagcc gagtagcccg cctccccgaa ctggcagccg aactggttcg
     1681 cagccgggtc gacgtcatcg tcgcgataca aaccccggcc gtctacgcgg cgaagaacgc
     1741 cacgcgcgac attcccatcg tcatgatggc aggcgaccca atcgcgacgg ggttaatcaa
     1801 caaccttgca cgtccggacg gcaatctcac cggattgtcc ggggccgccg ccgagctggc
     1861 ggccaagagc ctcgaattga tccccgagat ggtgccgggg gctcaccgct tgggcgttct
     1921 gggcaatgcc aatgatccgt tcatgaagcc ctttctcgat gacatccagc aggccgcccc
     1981 caaagtgcgg cttgaagtct atcagaccat cgttggcagc agcggcgagt tggatggcgc
     2041 cttcgcggca atcgcacact cgcgagcgga cgccgtcatg gtccagggca gcctctcgga
     2101 caagctggcg gtcggccttg cgctaaaata ccggttgcca tctctctcca ctcaaaaatc
     2161 cgcagtgcag gcgggaatcc tgatgtcata tagcgccgac ctgagggagc gaggccacga
     2221 catcgcgcgc tatgtagaca aaatcctcaa aggtaccatg ccagccgatc ttcccgtcca
     2281 gcagccgacc aggtacgagt tagcaatcaa cctcaagacc gcccaggcgc tggccctcac
     2341 cgtgccgc
//
LOCUS       DATAVD010000853         1949 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_452976, whole genome shotgun sequence.
ACCESSION   DATAVD010000853 DATAVD010000000
VERSION     DATAVD010000853.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1949
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_452976"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..602)
                     /locus_tag="VHX39_16375"
     CDS             complement(<1..602)
                     /locus_tag="VHX39_16375"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF012946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3992747.1"
                     /translation="MPDTQILAEPPDQDQVAQYDAIVIGAGISGMFMLYRLRQLGMTA
                     RVFEAGTDVGGTWYWNRYPGARFDSESWTYGYSFSKELLQEWDWKEHFSPQPDTLEYL
                     NLVTGKFDLRRDMQFRSTVTAAHWDDTANLWTVTLESGQQARSRFLITAIGILSAYTL
                     PAIPGRDSFRGPAYHPARWPHTPVDFTGKRVGVIGTGATA"
     gene            complement(625..1515)
                     /locus_tag="VHX39_16380"
     CDS             complement(625..1515)
                     /locus_tag="VHX39_16380"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3992748.1"
                     /translation="MTLSIRPIDPVSRPFFGGVASGIDITQPLSRDQAAEIEKGMDQF
                     GVMVFHDQRFTDETQMAFSRNFGELEFASHNLRQSKEQRLGAHINDISNLDANNNVLA
                     RDNRRRLFSLGTRLWHSDSSFKVVPAKYSLLSARVIPSTGGNTEFADMRAAYDALDDE
                     TKAECEGLVCEHSQLFSRAQIGFGDFTEEERQQFAPVQQRLIRRHPSTGRKSLYLASH
                     AGTIVGWPVPEARAFLRDLIEHATQRKFVYSHEWRQFDLVIWDNQATMHRGRPFDATQ
                     PRDMHRTTVAGISSTMAQAA"
     gene            complement(1580..>1949)
                     /locus_tag="VHX39_16385"
     CDS             complement(1580..>1949)
                     /locus_tag="VHX39_16385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HEX3992749.1"
                     /translation="ALQNIKAGSRRSQLDDRLGIDAKRDTIINKRMASAFHETHLPSL
                     LNFHRIDTVIVTGGSTSGCVRATAVDSLSHGFRTIVPEECTADRHESPHFANLYDMQM
                     KYADVVPVQSVFAYLQAWQP"
BASE COUNT          350 a          581 c          634 g          384 t
ORIGIN      
        1 atggcggtcg ccccggtacc gatgacgccg acgcgtttgc cggtgaagtc caccggcgtg
       61 tgtggccagc gtgccggatg atacgccggc ccccggaagc tgtcgcggcc gggaatggcc
      121 ggcagtgtat aggccgacag aatgccgatc gcggtgatca ggaaccgcga tcgcgcctgt
      181 tgcccgcttt ccagggtcac ggtccaaagg ttcgcggtgt cgtcccaatg cgccgcagtg
      241 accgtgctgc ggaattgcat atcgcggcgc agatcgaatt tgccggtgac gaggttgaga
      301 tattcgaggg tatccggttg cggcgagaaa tgctccttcc agtcccattc ctgcagcagt
      361 tccttggaga acgaatagcc gtaggtccag ctttcggaat cgaaacgggc accgggatag
      421 cggttccagt accaggtgcc gccgacatcc gtgccggcct cgaagacacg cgccgtcatg
      481 ccgagttgac gcaggcgata cagcatgaac atgccggaaa tgccggcgcc aatgacaatt
      541 gcgtcgtatt gcgcgacctg atcctggtct ggcggttccg ccaggatctg agtgtccggc
      601 atgatctttg ttcccctcgg gctgctacgc tgcttgcgcc atcgtcgagc ttatgccggc
      661 gaccgtggtg cgatgcatgt cgcgcggctg cgtcgcatcg aacgggcggc cacggtgcat
      721 ggtcgcctga ttgtcccaga tcaccagatc gaattgccgc cactcgtgcg aatagacgaa
      781 cttccgctgc gtcgcgtgct cgatcagatc gcgcaggaaa gcgcgagcct ccggcaccgg
      841 ccagccgacg atcgttccgg catgcgatgc caggtacaac gatttccgtc cggtcgaggg
      901 atgccgccgg atcagccgtt gctgcaccgg ggcgaactgc tgccgttctt cttcggtaaa
      961 gtcgccgaag ccgatttgcg cgcgcgagaa caattggctg tgctcgcaca cgaggccttc
     1021 gcactcggcc ttggtttcgt cgtcgagcgc gtcataagcg gcacgcatgt cggcaaattc
     1081 ggtgttgccg ccggttgacg gaatgacccg ggcggacagc agcgaatact ttgccggcac
     1141 gaccttgaac gaactatcgg aatgccacag ccgggtgccg agactgaaca gccgccgccg
     1201 attgtcgcgt gccagcacgt tgttgttggc atcgaggttg gagatgtcgt tgatatgcgc
     1261 acccaggcgc tgttccttgc tttggcgcag attgtggctg gcgaattcca gctcaccgaa
     1321 attgcgcgag aacgccatct gggtttcgtc ggtgaagcgc tggtcgtgga acaccatgac
     1381 gccgaactgg tccatgccct tttcgatctc ggccgcctgg tcgcggctga gcggttgcgt
     1441 gatgtcgatc cccgaggcga caccgccgaa gaacggacgc gacaccggat cgatcggacg
     1501 aatggacaaa gtcatggcaa aactcccttg ctggcgccag cgtgtgaagc cggccgccgt
     1561 ctgtcaacat cgcgccggct tagggctgcc atgcctgcag gtatgcgaac accgactgca
     1621 ccggcacgac gtcggcgtat ttcatctgca tgtcgtaaag attggcgaaa tgcgggcttt
     1681 cgtggcggtc agcggtgcac tcctccggca cgatggtgcg gaaaccgtgc gacaggctgt
     1741 ccactgcggt agcgcgcaca caaccggagg tcgagccgcc ggtcacgatc accgtgtcga
     1801 tccggtggaa gttcagtagc gacggcaaat gggtctcgtg gaacgccgag gccatgcgct
     1861 tgttgatgat ggtgtcgcgt ttggcatcga tgccgagccg gtcgtcgagt tgcgaacggc
     1921 gcgagcccgc cttgatgttc tgcaacgcg
//
LOCUS       DATAVD010000854         2845 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2502651, whole genome shotgun sequence.
ACCESSION   DATAVD010000854 DATAVD010000000
VERSION     DATAVD010000854.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2845
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2502651"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(89..1153)
                     /locus_tag="VHX39_16390"
     CDS             complement(89..1153)
                     /locus_tag="VHX39_16390"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3992750.1"
                     /translation="MQFGFCLMSDVTEIGFFSHVEALGYASVWVADSQMLFSDCYAVL
                     ALAARQTNRLRIGPGTAICGTRIAPVQAAAIATINVLAPGRVFLGIGTGNTAMRTMGQ
                     KPMKMAEYSEYLRVLAALLRGETIDHTFNGVTKPIRLLHREGRDMQLDPPIPLYVSGF
                     GPRAMALAGEHGDGIIFAIPPRGVPVAEALAHARQGAARGNRSLEGFRNASLSSVFVL
                     EKGEAVDSERVKAAIGPNVMASVYYFYDTVHERGIEPPPFLTRIWRKYCDLVEQTPPG
                     QRHFRTHECHYTGLHRGEAELIDAQLIRDTCLIGTADELAERIRELERDGLEELVFAI
                     GTDAKWRLAEDFARQVMPRL"
     gene            complement(1537..2019)
                     /locus_tag="VHX39_16395"
     CDS             complement(1537..2019)
                     /locus_tag="VHX39_16395"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3992751.1"
                     /translation="MDSEQPPNFRPSHNDFRWDGVAHQPYKQDGEAPFKDISRQTLFH
                     DDALACELRYFEMDANGWSSLERHEHAHAVMILRGRGQCMVGDEVRDVKQFDLITIPG
                     WTWHQFRANANEPFGFLCMVNMTRDRPVLPTEDDLARMRSNPVVAAFLAGADQEEQKN
                     "
     gene            complement(2022..>2845)
                     /locus_tag="VHX39_16400"
     CDS             complement(2022..>2845)
                     /locus_tag="VHX39_16400"
                     /inference="COORDINATES: protein motif:HMM:NF012246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016984 - ribulose-bisphosphate
                     carboxylase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RuBisCO large subunit C-terminal-like
                     domain-containing protein"
                     /protein_id="HEX3992752.1"
                     /translation="LFGNTSLHDDVILRDAAVPVPLRIPAKGTPELRRRLRVPQRAFT
                     GSALKPQGLAPERLAALAERMALGGLDFIKDDHGLANQAYSPFDVRVPLIAAAVARAV
                     RSTGHPTRYIPSLTGDLDQLRARTRIAVDCGLDCMMVAPMISGFATVRALTKSFPEVT
                     FFAHPAMGGAARIAPELLIGKLFPALGCGAVIFPTYGGRFGYSPATCHELADNARPAL
                     AVPAGGITLNRVGELLDFYGSDTMLLIGGNLLMAGHRITEESAAFAKAVAQHGKP"
BASE COUNT          567 a          883 c          871 g          524 t
ORIGIN      
        1 tcaggcgcag atccagatga tcaaataggt tggttgttcg cggccattgc gacgtcgggc
       61 gaatgccccg gttcgttttt gtgcaacgtc atagtcgcgg catgacctga cgggcgaaat
      121 cctcagccaa acgccatttc gcgtcggtgc cgatggcaaa aaccagttcc tccagcccat
      181 cgcgttccag ttcccggatc cgctccgcaa gttcgtcggc cgtcccgatc aggcaggtat
      241 cgcggatcag ttgtgcatcg atcagttccg cctcaccgcg atgcaggccg gtatagtggc
      301 attcatgggt gcgaaaatgc cgctgcccgg gaggtgtctg ttcgaccaaa tcgcaatatt
      361 tccgccagat acgggtgaga aacggcggcg gttcgatgcc gcgttcgtgc accgtgtcat
      421 aaaagtaata aacactggcc atcacgttcg gaccgatcgc ggctttcacc cgttccgagt
      481 ccaccgcctc gcccttttcc aacacgaaca cgctgctgag cgaggcgttg cgaaagccct
      541 ccagcgagcg gttgccacgc gcggcacctt gccgagcatg ggccaacgcc tcggccaccg
      601 ggacaccgcg cggcgggatg gcgaaaatga tgccatcgcc atgctctccg gccagcgcca
      661 tcgcgcgtgg gccaaacccg gagacgtata aaggaatcgg cgggtcgagt tgcatgtcac
      721 ggccctcgcg atgcagcagc cggatcggtt tggtgacgcc attaaaagtg tgatcgatcg
      781 tctcgccgcg cagcagcgca gccaaaaccc gaagatactc ggaatactcg gccatcttca
      841 tcggcttctg gcccatcgtg cgcatggccg tgttgccggt gcctatgccg agaaaaaccc
      901 ggccaggggc aagcacgttg atcgtcgcaa tggccgccgc ctgtactggc gcgatacgcg
      961 tgccacagat tgccgtgccc ggtccgatcc gcaaacggtt ggtttgtcgc gccgccaatg
     1021 ccagcaccgc gtaacaatcg gaaaacagca tctgactgtc ggcgacccag accgaggcgt
     1081 aacccagcgc ctcgacatga ctgaaaaagc caatttcagt cacatcgctc atcagacaga
     1141 agccgaattg catgacgcgt tcccttcgaa tggcgggggc tctcattatg gcggatcgcc
     1201 ggccattcgt cgtcatggtc gggtcgaccc gaacatcagt cgcgctgaat ggcctgtcag
     1261 tgcaacacag ccgagcaacg cattgcggta tccatcgacg catcgtgttt cattggttgt
     1321 ttgccctgat tccgcgacca gcgcgggtcg gacgggtcat ccgggttgtg tgtacgatga
     1381 cgcgtatccg cacactctgc gccatatcca tatgactctc ccatccgaca aagccatcgc
     1441 ccatccgaca aagccatcgc ccatccgaca aagccatcgg tggacaccga aagattcaat
     1501 tccagaggga ccgaggaacc gagaaggcgg gtcgacttag tttttttgtt cctcttggtc
     1561 tgcgcctgcc aggaacgcag ccacgacggg attggaacgc atacgggcca ggtcgtcctc
     1621 ggttggcagc actggccggt cgcgggtcat attgaccatg cacaggaacc cgaatggctc
     1681 gttcgcgttg gcgcggaact ggtgccaggt ccagccgggg atcgtgatca gatcgaactg
     1741 tttgacgtcg cggacctcgt cgccaaccat gcactggccg cggccgcgta ggatcatcac
     1801 ggcgtgcgcg tgctcatggc gttcgagcga tgaccagccg ttcgcatcca tttcgaaata
     1861 acgcagctcg catgccaacg catcgtcgtg aaacaaggtc tggcgggaga tgtctttgaa
     1921 cggtgcctcg ccatcctgtt tgtagggttg gtgggccacg ccatcccagc ggaaatcgtt
     1981 gtgcgacggc cggaagttcg gcggttgttc actgtccatg gtcaaggctt cccgtgttgc
     2041 gcgacggcct tggcgaaggc agcggactcc tcggtgatcc ggtgcccggc catcagcaga
     2101 ttgccgccaa tcagcaacat cgtgtcggag ccgtagaagt caagtaactc gccaacccgg
     2161 ttcagggtga tgccaccggc cggcacggcg agagcgggcc tcgcgttgtc agcgagctcg
     2221 tggcaggtcg ccggcgaata accaaatcgt ccgccgtagg ttggaaaaat caccgcgccg
     2281 cagccgaggg caggaaacag cttgccgatc agcagttcgg gtgcaatgcg ggccgcgccg
     2341 cccatcgccg gatgggcgaa gaacgtcacc tcgggaaacg acttcgtcaa cgcgcgaacg
     2401 gttgcgaaac cggagatcat tggggcgacc atcatgcagt ccaggccgca gtcgacggct
     2461 atccgtgtgc gtgcccgcag ttggtccagg tcgccggtca ggctggggat gtaacgggtc
     2521 ggatggcccg tggaacgaac cgcccgagcc acggccgcag caatcaacgg caccctgacg
     2581 tcgaatgggc tgtaggcctg attggccaga ccgtgatcgt ccttgatgaa atccagtccg
     2641 cccaaagcca tccgctcagc cagcgccgcc agccgctcgg gagcgaggcc ttgcggcttc
     2701 aatgccgagc cggtgaaggc ccgctgcggg acccgcagac ggcggcgcag ttcgggcgtg
     2761 cctttggccg ggatccgcaa tggcaccgga acggccgcat cgcgcaggat cacgtcatcg
     2821 tgcaaggagg tattgccgaa cagca
//
LOCUS       DATAVD010000855         3605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_639630, whole genome shotgun sequence.
ACCESSION   DATAVD010000855 DATAVD010000000
VERSION     DATAVD010000855.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3605
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_639630"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1110
                     /locus_tag="VHX39_16405"
     CDS             <1..1110
                     /locus_tag="VHX39_16405"
                     /EC_number="3.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_function: GO:0050568 - protein-glutamine glutaminase
                     activity [Evidence IEA];
                     GO_process: GO:0006482 - protein demethylation [Evidence
                     IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0018277 - protein deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator protein-glutamate
                     methylesterase"
                     /protein_id="HEX3992753.1"
                     /translation="AAPARVMICDDSATIRGAISRMLESDPGIQVVSKASNGRMAIEE
                     LKRTKVDVLVLDIEMPVLDGMTALPLLLQTDPGLKIVMASTLTTRGADIAMRALRMGA
                     ADYVPKPSTIGATSDERFKLELISKVKGLARLRNRAALPPRPAPSCMTRPAPVLPPKL
                     LAIGSSTGGPQALFTLIQALGRSVNVPIVLTQHMPATFTPILAEHITRLGGLPCAEAK
                     DGEALLPGQIYLAPGDKHLIVERDGASAGRSPASQPNGQRAPMGAVVARARLSTDPPE
                     NFCRPAVDPMLRSAAGACDGRVLVTMLTGMGHDGLAGTRRVVEAGGAAIAQDEATSVV
                     WGMPGAIAQAGLCHAVLPLPRIAQKLLEMLRVPAK"
     gene            1107..1973
                     /locus_tag="VHX39_16410"
     CDS             1107..1973
                     /locus_tag="VHX39_16410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HEX3992754.1"
                     /translation="MSAPLTSAAFTVLADLLKARSGLIIGQDKIYLLETRLVTLLRRE
                     QLADLNALAERIGRPGAEPLAREVVEAMTTNESFFFRDDKPFQHFRTQALPRMISARP
                     AGSTLRIWSAASSTGQEAYSLAMILAESKSVIANRKIEIIGTDIARGPLMRAKDGQYT
                     QFEVQRGLPVQYLMKYFKKDDPHWRIVPEIREMAQFREFNLLGDLRSLGRFDIVFCRN
                     VLIYFDQSTKTKVLEAIAAQMPPDGMLYLGGAETVLGITGRFAPLPGERGVYGLSGAP
                     AESRAEARVGTA"
     gene            complement(1981..2760)
                     /gene="otnI"
                     /locus_tag="VHX39_16415"
     CDS             complement(1981..2760)
                     /gene="otnI"
                     /locus_tag="VHX39_16415"
                     /EC_number="5.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-tetronate isomerase"
                     /protein_id="HEX3992755.1"
                     /translation="MPRLAANLSMMFNEVPFLERFTAARKAGFEGVEFLFPYEFPAAE
                     LRSRMVGEGLTQVLFNMPPGDWANGERGLAALPGRQAEFREGVKRALDYAGTLECRRV
                     HCMAGIIPANVSLTTAAAVYAANLSWAVEQARPEGVKLMIEPINHRDMPGYFLNTQAQ
                     GAAMVEAIGADRLGLQFDVYHVQITEGDITKRMERFMPVIDHMQIADVPARNEPGTGE
                     IGWEFVFRRIDELGYMGWVGCEYRPAGDTVGGLAWRQKFGV"
     gene            2836..>3605
                     /locus_tag="VHX39_16420"
     CDS             2836..>3605
                     /locus_tag="VHX39_16420"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX3992756.1"
                     /translation="MIEQRVLMALLIGGVVVGCVLVLYPFLSALLWAGILVFTTWPVH
                     EWIRARLHLGRGAAALVMIGLTAIVLVLPIALAAPGGSDDVTQLRHAILDDLRDGLPM
                     SPGWLAEVPLVGPTLASLWNHWAADIGDLLAALRPFLGIVLEGGLSVVLGIANGVVMF
                     LLALFVAFFFYVYGEPIAARLRLMLRRVAGDRADQLAEVTGSTIRGVVYGIVGTAVVQ
                     GILTAFGLWLSGVPRPLLLGGLAGLVAVLPVGAPVVWIP"
BASE COUNT          620 a         1072 c         1165 g          748 t
ORIGIN      
        1 gccgcgcctg ccagagtgat gatttgtgac gactctgcaa ccattcgcgg ggcgatcagc
       61 cgtatgcttg aatccgatcc gggaattcag gtggtttcca aggcaagcaa cggccgaatg
      121 gcgattgagg aactgaagcg aaccaaggtc gacgtactgg tcctcgatat cgagatgccg
      181 gtgctggacg gcatgaccgc tttgccgttg ttgctgcaaa ccgatccggg cctgaagatc
      241 gtcatggcct cgacgttgac cacgcgcggc gccgatatcg ccatgcgtgc gctgcgtatg
      301 ggtgcggcgg actatgtccc caaaccgtca accatcggcg ccaccagcga cgaacgtttc
      361 aaactggaat taatcagcaa ggtgaagggg ctggctcggc tgcgcaatcg cgcggccttg
      421 ccgcctcgtc cggcgccgtc ctgcatgacc cgcccggcgc cggtactgcc gccgaaacta
      481 ctcgcgatcg gcagttccac cggcggccca caggctctat ttactctcat tcaggcactc
      541 ggccgttctg ttaacgtccc aattgtgctg acccagcaca tgcccgcgac cttcacgccg
      601 atcctggcag agcacatcac gcggttaggt ggtttgccct gcgcggaggc gaaagatggc
      661 gaagctttgt tacctggcca gatctatctt gctccgggtg ataagcatct gatcgtcgaa
      721 cgcgacggcg cctcggctgg cagaagtcca gccagccagc cgaatggtca acgcgctccg
      781 atgggcgctg tcgtggcgcg cgcacgattg tcgaccgacc cgcctgagaa tttttgccga
      841 cccgctgtcg atcccatgct gcgttcggct gccggtgcct gtgatgggcg agtgctggtg
      901 acgatgctca ccggtatggg acacgatggc ctggccggca cgcgccgcgt ggtggaagca
      961 ggaggcgcag cgatcgctca ggatgaggcg accagtgtgg tttggggtat gcccggcgcg
     1021 atcgcgcagg ccggcctgtg ccacgccgtg ttgccgttgc ctcggatcgc ccaaaagctg
     1081 ctcgaaatgt tgcgtgtgcc tgcgaaatga gcgcgcctct gacatctgct gcatttaccg
     1141 tgctggctga tctgctaaag gcacgatctg gtctgattat cggtcaggac aagatctatt
     1201 tgttggaaac ccggctcgtc accttgttgc ggcgtgagca gctggccgac ctcaatgcat
     1261 tggccgaacg gatcgggcgg ccgggggcgg agccgctggc gcgagaggtg gtcgaagcga
     1321 tgaccaccaa cgaaagtttc ttctttcgtg acgacaagcc gttccagcat ttccgcacgc
     1381 aggctttgcc acgaatgatc tcggctcgtc cggccggaag cacgctgcgc atctggtcgg
     1441 ccgcgtcatc gaccggacag gaggcctatt ctctggccat gattctggcc gagagcaaat
     1501 cggtcatcgc caatcgtaaa atagagatca tcggcacgga catcgcccga gggccactga
     1561 tgcgagccaa ggatggacaa tacactcagt ttgaagtgca acgcggtctg ccggtgcagt
     1621 atttgatgaa atatttcaag aaggatgacc cacactggcg aattgtcccc gagattcgcg
     1681 aaatggcgca gtttcgcgag ttcaacctat tgggcgacct gcggtctctg ggtcggttcg
     1741 acatcgtatt ttgccgcaac gtgctgattt acttcgatca gtcaacgaaa accaaggtgc
     1801 tggaggcgat cgcggcgcag atgcctccgg acggcatgct gtatctcggc ggcgccgaaa
     1861 cggtgctggg cattactggg cgatttgcgc cactgcccgg agagcgcggg gtatatggtc
     1921 taagtggcgc gccggcggaa agtcgggcgg aggcacgggt gggcacggcg tagtcgcttc
     1981 ctaaacgcca aacttctgcc gccacgccag tccgccaacg gtatcgccgg ccggccggta
     2041 ctcgcacccg acccaaccca tgtagccaag ttcgtcgatc cgccggaata cgaactccca
     2101 gccgatttcc ccggtgcccg gctcattgcg cgcggggaca tcggcgatct gcatgtggtc
     2161 gatgacaggc atgaaccgtt ccatgcgctt ggtaatgtca ccctcggtga tctgcacgtg
     2221 gtagacgtcg aattgcaagc ccagacggtc ggcaccaatg gcctccacca tcgccgcacc
     2281 ttgtgcctgg gtgttaagaa aataccctgg catgtcgcgg tggttgatcg gttcgatcat
     2341 cagtttcacg ccctcagggc gggcctgctc gacggcccag gataggttgg cggcgtagac
     2401 tgcggcggcg gtggtgagag agacgttcgc cggaataatc ccggccatgc aatgcacgcg
     2461 gcggcattcc aatgtgccgg catagtcgag cgcgcgcttc acgccttcgc ggaattccgc
     2521 ctgacggcca ggcagcgccg ccagtcctcg ctcgccgttg gcccaatctc ccgggggcat
     2581 gttgaagagt acctgggtca ggccctctcc gaccatgcgg ctgcgcagtt ccgcagccgg
     2641 gaactcgtac gggaacagga attccacgcc ctcgaatcct gccttgcgcg cagcagtaaa
     2701 tcgttccagg aacgggacct cgttgaacat catggaaaga ttggcggcca gacgcggcat
     2761 gatggacctc cgatcgaatg ttcgccgaac ctaccggttc gttgccctgt tggccagcca
     2821 gcggcacatc gggccatgat cgagcaacgt gttctcatgg cgctgctgat cggcggcgtg
     2881 gtcgtgggct gcgtcctggt gctgtatcca ttcttgtccg ctttgctgtg ggccggaatt
     2941 ttggtgttca ccacctggcc ggttcatgag tggatccgcg cacgtctgca cctcgggcgc
     3001 ggtgccgccg ccctggtcat gatcggcctg accgcaatcg tcctggtatt gccgattgcg
     3061 cttgcagccc cgggcggcag cgacgacgtg acccagcttc gtcatgcgat cctggacgat
     3121 ctgcgagacg gcctgccgat gtcgccgggg tggctcgcgg aggtccctct cgtgggccca
     3181 acgttggcca gtctctggaa ccattgggca gcggacatcg gcgatctcct cgcggcgtta
     3241 cggccattcc tgggcattgt tctcgagggc gggctcagtg tcgtgcttgg catcgccaat
     3301 ggggtcgtga tgtttctgct cgcgctgttt gtggcgttct ttttctacgt gtatggcgag
     3361 ccgatcgcgg cacggctgcg gctgatgttg cggcgggttg ccggagatcg ggcggaccag
     3421 ttggcggagg tgacaggatc taccatccga ggcgtggtat acgggattgt tggcactgcg
     3481 gtggtgcaag gcattttgac cgcgtttggg ttgtggctgt ccggtgtgcc cagaccgttg
     3541 cttctgggtg gactcgcggg tctggtggcg gtgttgccgg tcggcgcgcc ggtggtctgg
     3601 atccc
//
LOCUS       DATAVD010000856         5102 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2312550, whole genome shotgun sequence.
ACCESSION   DATAVD010000856 DATAVD010000000
VERSION     DATAVD010000856.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5102
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2312550"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..873
                     /gene="urtC"
                     /locus_tag="VHX39_16425"
     CDS             <1..873
                     /gene="urtC"
                     /locus_tag="VHX39_16425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006116736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtC"
                     /protein_id="HEX3992757.1"
                     /translation="PAATKIQSTPGIPDFMDWNQLTHLPWFWQPFHSLVFTLFAVPLV
                     PMLLALIVGVAMFKRRVGGTYFAIITQAVAAILTILIIGQQGYTGGVNGITDLRTLHG
                     WDIRPDHAKNVLYFINGVLLIACVLLAQFVRRSKLGRILVAMRDKEDRVRFSGYDVAD
                     FKIFVFCFAAGIAAIGGAMFTLQVGFMSPSFVGIVPSIEMVIFCAVGGRTSILGAIYG
                     ALTINWARTTFSEDLPQVWLFAMGSLFILVVVAFPNGLAGIYRRYLDPLVDRVLPPSR
                     RRAPTIASVETPAE"
     gene            888..1634
                     /gene="urtD"
                     /locus_tag="VHX39_16430"
     CDS             888..1634
                     /gene="urtD"
                     /locus_tag="VHX39_16430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter ATP-binding protein UrtD"
                     /protein_id="HEX3992758.1"
                     /translation="MPPETDFLLGVEGLTVSFDGFRAVDDLSFYLDRNEIRVIIGPNG
                     AGKTTVLDLICGRTKATSGSVKFKGLELTRMKEHEIVRAGVGRKFQTPSIYEDLTVFE
                     NLEISFPRGRSVFGALMFQRDAEVRDRVEEIAQSIFLADHLDNLAEYLSHGQKQWLEI
                     GMLLIQDPALMMLDEPVAGMSISERKKTAELLHRVIQDRSVLVIEHDMDFVGDIAHRI
                     TVLHQGRVISEGSMAHVKADPKVVEVYLGH"
     gene            1624..2328
                     /gene="urtE"
                     /locus_tag="VHX39_16435"
     CDS             1624..2328
                     /gene="urtE"
                     /locus_tag="VHX39_16435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010667998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter ATP-binding subunit UrtE"
                     /protein_id="HEX3992759.1"
                     /translation="MVTEPVLKVTDLHAGYGQSEVLHGLNFSVAPGEIVVVVGRNGMG
                     KTTLMKSLIGMVPVKSGQIELDGTDVAHFKSFQRVRKGIAFVPQGRMIFSNMTVEENI
                     ETGLFAHNTPAVPPDIYTLFPVLQDMKARRGGNLSGGQQQMLAIARALATDPKVLLLD
                     EPTEGIQPSIILELARTLKRIRDERGLSIVASEQVLSFALDIADRVIVLEGGDIVHED
                     ARADLDQEKVARYLAV"
     gene            2362..3591
                     /gene="fmdA"
                     /locus_tag="VHX39_16440"
     CDS             2362..3591
                     /gene="fmdA"
                     /locus_tag="VHX39_16440"
                     /EC_number="3.5.1.49"
                     /inference="COORDINATES: protein motif:HMM:NF045496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004328 - formamidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formamidase"
                     /protein_id="HEX3992760.1"
                     /translation="MTDTLIKVDLSQSAYENDMIHNRWHPDIPMVATVKPGQDFKIEC
                     YDWTGGFIKNDESAADVRDIDLSIVHFLSGPVGVEGAEPGDLLVVDILDIGAFPHNSW
                     GFNGFFSKQNGGGFLTEHFPQAQKSIWDIKGMFTSSRHVPGVNFAGLIHPGLIGCLPD
                     PKLLDTWNKRETGLIATNPTRVPPLANAPFGPTAHMGRLTGDAKAAAAATGARTVPPR
                     EHGGNCDIKDLSRGAKVYFPVYVPGAGLSMGDLHFSQGDGEITFCGAIEMPGWIHLKV
                     ELIKGGMAKYGIKNPIFKPSVIKPAYSDYLIFEGISVDEAGEQYYLDVNVAYRQACLN
                     AINYMTKFGYTPAQAYAILGTAPVQGHISGVVDIPNSCATLWLPTEIFDFDINPGADG
                     PSIAAKGGVPMPLAPDL"
     gene            3606..3932
                     /locus_tag="VHX39_16445"
     CDS             3606..3932
                     /locus_tag="VHX39_16445"
                     /inference="COORDINATES: protein motif:HMM:TIGR02605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEX3992761.1"
                     /translation="MPVYEYMCQDCGPFIAIRPMAEFDQPQPCGECGGAAPRALLTAP
                     AMSGMDAGQRRAAAVNERSAHAPTRAKRHPSSCGCCSGKSRKTLRAETVTAKSFPTQR
                     PWMISH"
     gene            3997..4173
                     /locus_tag="VHX39_16450"
     CDS             3997..4173
                     /locus_tag="VHX39_16450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992762.1"
                     /translation="MEGPRRSGGGAPLDNRSDRFGWAHFTRFDIRPDGSVHASDRPGL
                     AFTLRTNALDRFRY"
     gene            4447..>5102
                     /locus_tag="VHX39_16455"
     CDS             4447..>5102
                     /locus_tag="VHX39_16455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992763.1"
                     /translation="MSTAGREDIHSLWDDLADFGAERSAQAATHLMSFLCERGGAWNA
                     TWAGATRLDGGRDDDPLMGWRVGAVQVLRPIPPHPDEGHFKEILKIWDKREIDPSFLL
                     PMRGVGTFRTYSFRRELPENWFKSAFYEHHYASVGTFDAVFIAFPLNEDCESHFGFYA
                     RNRFTDEQIALFTDVLRGIKWFHRNLMLNQGLLMASAPLSGAERRVLPLLLTAASEKD
                     "
BASE COUNT          973 a         1556 c         1566 g         1007 t
ORIGIN      
        1 ccggcggcga cgaaaatcca gtccacgccg ggcattcccg acttcatgga ctggaaccag
       61 cttacccatc tgccgtggtt ctggcagcca ttccacagcc tggtcttcac cctttttgcc
      121 gtaccgctgg tgcctatgct gctggcgctg atcgttgggg tcgcgatgtt caagcgccgc
      181 gtcggcggca cctacttcgc catcatcacc caggcggtgg cggcgatcct gaccatcctg
      241 atcatcggtc agcagggcta taccggcggc gtcaacggca tcaccgacct gcgcaccctg
      301 cacggctggg acatccgccc cgatcacgcc aagaatgtgc tgtactttat caacggcgtg
      361 ctgctgatcg cctgtgtgct gctcgcgcaa ttcgtccgcc gcagcaagct gggccgcatc
      421 ctcgtggcca tgcgcgacaa ggaagaccgc gtccgtttct ccggctacga tgtcgccgac
      481 ttcaagatct tcgtgttctg tttcgccgcc ggaatcgcgg cgatcggcgg cgcgatgttc
      541 accctgcagg tgggcttcat gtcgccgtcc ttcgtcggca tcgtaccgtc gatcgagatg
      601 gtgatcttct gcgccgtcgg cggccgtacc tccatcctcg gcgcgattta cggagcactc
      661 accatcaact gggcgcgcac caccttttcc gaggatttgc cgcaggtctg gctgtttgcc
      721 atgggatcgc tgttcattct ggtcgtggtc gccttcccta acggactggc cggcatctat
      781 cgccgctacc tcgatccgct ggtcgatcgc gtgctgccac cgagccgccg tcgggcaccg
      841 acgatcgcct ccgtcgaaac gccggccgaa tagcaggaga cagcagcatg ccaccggaga
      901 ccgactttct gctgggtgtc gagggcctga ccgtttcctt cgatggattc cgcgccgttg
      961 acgacctgtc tttctacctg gatcggaacg aaatccgcgt catcatcggc ccgaacggcg
     1021 caggcaagac caccgtgctg gatttgatct gcggccgcac caaagccact agcggatcgg
     1081 tcaagttcaa aggcttggaa ctgacccgca tgaaagagca cgagatcgtc cgagccggcg
     1141 tcggccggaa gtttcagacg ccatcgattt acgaagacct gacggtgttc gaaaatcttg
     1201 aaatctcctt cccgcgtggc cgttcggtgt tcggtgcgct gatgttccag cgcgatgccg
     1261 aggtgcgtga ccgggtggag gagatcgcgc aaagcatctt cctggcggac cacctcgaca
     1321 acctcgccga atatctcagt cacggacaga agcaatggct ggagatcggc atgctgctga
     1381 tccaggaccc ggccttgatg atgcttgacg aaccggttgc cggcatgagc atcagcgaac
     1441 gcaagaagac cgcggaactg ctgcaccggg tcatccagga ccgttcggtt ttggtgatcg
     1501 agcacgacat ggacttcgtc ggcgacatcg cccaccggat caccgtgctg caccagggcc
     1561 gcgtgatctc ggaaggctct atggcccacg tcaaggccga cccgaaagtg gtggaggtct
     1621 atcttggtca ctgaaccggt gctgaaagtc accgacctgc acgccggcta cggccagagt
     1681 gaggtgctgc acggcctgaa cttcagtgtc gcccccggcg agatcgtggt cgtcgtcggc
     1741 cgcaacggca tgggcaagac aacgctgatg aaatcgttga tcggcatggt cccggtgaag
     1801 tccggacaga tcgaactgga cggcaccgat gtggcccact tcaaaagttt ccagcgggtg
     1861 cgaaaaggca ttgcgttcgt gccgcaaggt cgcatgatat tttccaacat gaccgtggag
     1921 gagaacatcg aaaccggatt gttcgcccac aacacaccgg cggttccgcc tgatatctat
     1981 acgctgtttc ctgtgctgca ggacatgaag gcgcggcgtg gcggcaacct gtcgggtggc
     2041 cagcaacaga tgctcgcgat cgcccgcgcg ctggcgaccg atcccaaagt gctgctgctg
     2101 gacgaaccga ccgagggcat ccagccgtcg atcattctgg aactcgcgcg cacattgaag
     2161 cgtatccgcg acgaacgcgg cctgagcatc gtcgcctcgg aacaggtgct cagcttcgcg
     2221 ctcgacatcg ccgaccgggt gatcgtcctg gaaggcggcg acatcgtgca tgaagacgca
     2281 cgtgccgatc tcgatcagga aaaggtcgcg cgttacctgg cggtctgaac caaatccaac
     2341 gtcaacaaga atggggacat tatgacggac actcttatca aggtcgatct gtcgcaatcc
     2401 gcttacgaga acgacatgat ccacaatcgc tggcacccgg acattccgat ggtcgccacg
     2461 gtgaagccgg gtcaggactt caagatcgag tgctacgact ggaccggtgg tttcatcaag
     2521 aacgatgaat cggccgccga cgtgcgcgac atcgacctca gcatcgtgca tttcctcagc
     2581 ggcccggttg gggtcgaggg cgccgaaccg ggcgatctgc tggtcgtgga catccttgac
     2641 attggtgcgt tcccgcacaa ttcatggggc ttcaacggtt tcttctccaa gcagaacggc
     2701 ggcggcttcc tgaccgagca ttttccccag gcacagaagt cgatctggga catcaagggc
     2761 atgttcacca gttcccgcca tgtgccgggc gtgaatttcg ccggcctgat ccatcccggg
     2821 ctgattggtt gcctgcccga tccgaaactg ctggacacct ggaataagcg ggaaaccggc
     2881 ctgatcgcga ccaatccgac ccgcgtgcca ccgctggcca atgcgccctt tggaccgacc
     2941 gcgcacatgg gccggctgac aggagacgcc aaggccgccg ccgccgcgac cggcgcccgc
     3001 accgttccgc ccagggaaca tggcggcaac tgcgacatca aggacctttc ccgtggcgct
     3061 aaggtttact tcccggttta cgtccccggc gccggtcttt ccatgggcga tctgcacttc
     3121 agccagggcg acggcgagat caccttctgc ggggcgatcg aaatgcccgg ctggatccac
     3181 ctgaaggtgg aactgatcaa gggtggcatg gcaaagtacg gcatcaagaa cccgatcttc
     3241 aaaccgagtg tgatcaagcc ggcgtacagt gactatctga tcttcgaggg catctcggtc
     3301 gatgaagctg gggaacaata ctacctcgat gtgaacgtgg cctatcgtca ggcgtgcctg
     3361 aacgcgatca actacatgac aaagttcggc tacaccccgg cgcaggccta tgccatcctg
     3421 gggacggcgc cggtgcaggg ccatatcagc ggcgtggtcg atatcccgaa ctcctgcgcc
     3481 acactctggt tgccgacgga aatattcgac ttcgacatca atccgggtgc ggatgggccc
     3541 agcatcgccg ccaagggcgg tgtgccgatg ccattggcgc cggatctgta acgggggcag
     3601 cggcaatgcc agtctatgaa tatatgtgcc aggactgcgg gccgttcatc gcgatacgcc
     3661 cgatggcgga attcgatcag ccgcagccgt gcggcgagtg tgggggggca gcgccgcgtg
     3721 cgctgcttac cgcgccggcg atgtcgggga tggacgccgg gcagcgtcga gcggccgcgg
     3781 tcaatgaacg gagcgcccat gcgccgaccc gagcgaaacg acacccgtca tcgtgtggtt
     3841 gctgttcggg taagagtcgc aagacattgc gtgcggagac ggtcacggcg aagagctttc
     3901 cgacgcaacg gccctggatg atcagtcact gaggcgttgg tgatgtgaat tgtcgtgtcg
     3961 gcgtggcctt gccgacgacg gttgcaagcg tggtgcatgg aggggccgcg tcgatcaggc
     4021 gggggagcgc cgctcgacaa ccgttccgat cgcttcgggt gggcgcattt cacgcggttc
     4081 gacatccgcc cggacggttc ggtgcatgcg tcggaccggc cgggtctcgc cttcacgttg
     4141 cggacgaatg cgctggatcg cttccgctat tgacggaccg gagtttgcat ttaggcatag
     4201 caatccgtat gcggaagacc acaaggggct gatggcgccc ggaagggcga tcgatgctta
     4261 aagtgcagac ttccgtgata aacactacgc tcgaccgcga tcatgctgtc gcagagcgtt
     4321 gtgtccgcct gcgtcggaga gcggcctgac cactcccatg tttttgacgg gctttcgtaa
     4381 cacaagtagg cgctctgatt ctttttgtta caccgcaacg ctctgaaatg agcccacgat
     4441 gggcacatga gtaccgcagg cagggaagat attcacagcc tttgggacga tctggctgat
     4501 ttcggggccg aacggtccgc ccaggccgca acgcatctga tgtcgtttct ctgtgagaga
     4561 ggcggcgcct ggaatgctac ctgggccggt gcgacccggc tggacggtgg ccgcgacgac
     4621 gacccgctca tggggtggcg cgtcggcgcc gtgcaggtgc tccggccgat tccgcctcac
     4681 ccggacgagg gtcattttaa ggaaatactg aagatctggg acaagcggga gatcgacccc
     4741 tcgtttcttc tgccgatgcg gggcgtcggc acgttcagaa cctattcctt ccggcgggaa
     4801 ctgcccgaga actggttcaa atccgccttc tatgaacatc actatgcgtc ggtcggcaca
     4861 ttcgatgccg tcttcatcgc atttcccctg aatgaggatt gcgagtctca tttcggattc
     4921 tacgcgcgca acaggtttac cgatgaacag atcgccctct tcaccgacgt gctgcgcggc
     4981 atcaaatggt ttcaccgcaa cctgatgctc aaccaggggt tgcttatggc atcggcaccg
     5041 ctatcggggg ccgaacgcag ggtgctgcca ttgctgctga ccgctgcctc cgagaaggat
     5101 tt
//
LOCUS       DATAVD010000857         1661 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1570801, whole genome shotgun sequence.
ACCESSION   DATAVD010000857 DATAVD010000000
VERSION     DATAVD010000857.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1570801"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1661
                     /locus_tag="VHX39_16460"
     CDS             <1..>1661
                     /locus_tag="VHX39_16460"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3992764.1"
                     /translation="REDIDIYFARRLVMERLSDAREAIPAGLATPEMGPIATGLGEIF
                     QFKVAGGVLSPMELRSILDWQIATKLRTVPGIVEVNPQGGELKTYEVQVDNNKLMAYR
                     VTLETVINALQRNNSNAGGAYLERAEQQSVIRGEGLITSLADIENIVIGVSPSGTPVL
                     VRNIAQVQFAPMVRQGFATQDGKGEIVVGVAMMLIGENPRVVVDRVKAKLDDIQKTLP
                     RGVRIVPLYDRTDLVRRTIGTVSRNLIEGGLLVIAVLLLLLGSFRGGLVVATAIPLSM
                     LAAFTGMVEANISGNLMSLGAIDFGLIVDGSVVMVENILRRLAARKADEDVMDVVKSA
                     AQQVARPIFFGVLIIVLVYVPVLTLTGTEGKMFRPMALTVLFALTASLAIALFLMPVL
                     TWFAFRRDQHGAEKQTWVMRQFHRLYRPTLDLAVRFPKLTFALAAGVFAVSLVGIPFI
                     GTEFMPRLDEGSIVVEMFRLPGISVTESLHGNQIVETVLREFPEVQTVFCRTGSPEVA
                     TDPMALDQSDVYVMLKPLSEWPRKRTKDDLIAAMGARLSQEAPGA"
BASE COUNT          325 a          454 c          504 g          378 t
ORIGIN      
        1 ttcgggagga catcgacatt tacttcgccc gtcgccttgt tatggaaagg ctcagcgacg
       61 cccgcgaggc aatacccgct ggactggcca ctccagagat gggaccgatc gccaccgggt
      121 tgggggagat tttccagttt aaggttgcgg ggggcgtcct ttcacccatg gaacttcgca
      181 gtatcctcga ctggcagatc gcgaccaaat tgagaacggt gcccgggatt gtcgaggtca
      241 atccgcaggg cggcgaactc aagacctatg aagtccaggt agacaacaac aagctgatgg
      301 cgtaccgggt gacactcgaa acggtcatca acgcccttca gcgcaacaac tccaacgccg
      361 ggggagccta tctggaacgg gcggagcaac aatccgtcat acggggcgag ggcctgatta
      421 ccagcctcgc agatatcgaa aacatcgtga tcggtgtttc tccgtcggga actccggtgc
      481 tcgtccgcaa tattgcgcaa gtccagttcg ctccgatggt ccgacagggc ttcgccacgc
      541 aggacggcaa gggagaaatc gttgtcggcg tggccatgat gctgatcggc gagaatccgc
      601 gggttgtagt ggacagagtg aaggccaagc tggatgacat ccagaagacg cttccccgcg
      661 gagttagaat tgtcccgctc tatgaccgaa cagatctggt tcgcagaacc atcggcacgg
      721 tatcgcgcaa tctgatcgaa ggtggtctcc tcgtgattgc agttctcctt ctcctgctgg
      781 gaagttttcg gggtggtctc gtggtggcaa ctgcgattcc gctgtcgatg ctggccgctt
      841 ttaccggcat ggttgaggcg aatatctccg gcaatctcat gagcctgggc gcaatcgact
      901 tcggtttgat tgtggacggc tcggtcgtga tggtcgagaa tatcctgcgc cgtcttgccg
      961 cccgaaaggc tgacgaagac gtgatggatg tggtgaaatc tgccgcgcag caggtcgcgc
     1021 gcccgatctt cttcggagtc ctgattatcg ttctcgttta cgttcccgtg ctgactctca
     1081 ccggcacgga aggcaagatg ttccgtccga tggctctgac tgtgctgttt gcattgacgg
     1141 cgtcgctcgc gattgcgctc ttcctgatgc cggtcctcac atggtttgca ttccgacgag
     1201 atcagcatgg tgcggaaaag cagacgtggg tgatgcgcca gtttcatcgg ctctatagac
     1261 cgactcttga cctggccgtc cgatttccga aacttacatt cgcgctggca gcgggggtct
     1321 tcgcggtttc tctcgtcggg atccctttca ttggcacgga gttcatgccg cgccttgacg
     1381 agggttccat tgtggtggag atgtttcgtt tgcccggtat ttccgtgact gagtctcttc
     1441 atggcaatca gatcgtggaa acggtactga gggaatttcc ggaagtacag accgtattct
     1501 gccgaactgg cagcccggag gttgctaccg atccgatggc gctggatcaa agcgacgttt
     1561 acgtcatgct gaaaccgctt tccgaatggc cgcgcaagcg caccaaagac gacctgatcg
     1621 cggcaatggg ggctcgcctt tcgcaggaag cacccggtgc g
//
LOCUS       DATAVD010000858         2264 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_640582, whole genome shotgun sequence.
ACCESSION   DATAVD010000858 DATAVD010000000
VERSION     DATAVD010000858.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2264
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_640582"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            47..1186
                     /locus_tag="VHX39_16465"
     CDS             47..1186
                     /locus_tag="VHX39_16465"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992765.1"
                     /translation="MSLCSQAVQLGAVPALIALRLNASGFSVSVVGVVAAAPWMAVLL
                     LGRRIPRLLARHNYRPVNATALAISAAAVAAIIFATNPYAIFAANFCLGVGLIFRWIA
                     CDSWIIALAPDAIRGRAIGIHETLMGCGIAAGPLIIAIFGSQTAAPLLACLGLLFVAT
                     YALVSVGPSVAPEMPLDSPSTRRLRRITLMALAAFIAGFIETSSVSFLPVLSLHAHWP
                     IVSTLALGVFTLGGTLLQLPIGYLADKLGYRVAQLITAGVIIGSSATFIVMGHQFVPL
                     LITLFTLGGAAGAMNTLAVIEAGSSVAANLIADAAARVALAYTVGSIIGPPILGFLVS
                     ILGPTSFPFVFATIGVAFCAARLLARPQASGVKTTLPTAVFEAGT"
     gene            complement(1129..1971)
                     /locus_tag="VHX39_16470"
     CDS             complement(1129..1971)
                     /locus_tag="VHX39_16470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class III extradiol dioxygenase subunit beta"
                     /protein_id="HEX3992766.1"
                     /translation="MARITAGIGSSHVPAIGAALDGGRTAHPDWAPIFAGYEWTRNWV
                     AEQKPDVIILVYNDHASAFSLDVVPTFAIGCADSFAPADEGWGPRRVPIVQGHSKLAW
                     HIATSVVLDEFDLTIMNEMNVDHGLTVPLSLVLGQPSEWPVKVIPLAVNVIQYPTPTA
                     NRCFRLGEAIARAVKSYPEDLNVQVWGTGGMSHQLSGERAGLINREWDTRFLDQLTSD
                     PDALRTMSHAEYVREAGSEGMELIMWLTMRGALGPKIRELYRFYHVPASNTAVGNVVF
                     TPEA"
     gene            complement(1972..>2264)
                     /gene="ligA"
                     /locus_tag="VHX39_16475"
     CDS             complement(1972..>2264)
                     /gene="ligA"
                     /locus_tag="VHX39_16475"
                     /EC_number="1.13.11.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR02792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018579 - protocatechuate 4,5-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0046278 - 3,4-dihydroxybenzoate metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protocatechuate 4,5-dioxygenase subunit alpha"
                     /protein_id="HEX3992767.1"
                     /translation="LMSATNRVRFKADERAYLDEWAMSEAQKQAVMQRDFKALLECGG
                     NIFFVLKIAAVDGRPTQSVAASFAGQSTEEYAAMMRSGGRNPAGLRSISGRF"
BASE COUNT          367 a          745 c          712 g          440 t
ORIGIN      
        1 atggcgcaga ggcggagtcg ggcattccct ggcacacgtc aacgtcctgt ccctctgctc
       61 ccaggccgtc cagctcggcg ccgttcccgc gctgatcgcc ctcagactca acgccagcgg
      121 cttttcggtc agcgtcgtgg gcgtggttgc ggccgctccg tggatggcgg tgctgctgct
      181 cggccgccgg atcccgcggc tgctggcccg ccacaactac cggcccgtca acgccacggc
      241 actggccatt tcggcggcgg cggtcgcggc catcattttc gcgaccaatc cgtatgcgat
      301 cttcgcggcg aacttctgcc tgggggtggg cctgatcttt cgctggatcg cctgcgacag
      361 ctggatcatc gcgcttgcgc cggatgctat tcgcggtcgg gccattggca tacacgagac
      421 actgatggga tgcggcattg ccgcaggccc gctgatcatc gccatattcg gcagtcagac
      481 cgctgcccca ctgcttgcct gtctgggcct gctgttcgtc gcgacctacg cgctggtctc
      541 ggttggccca tcggtggcgc cggaaatgcc gctggattct ccgagcaccc gaagactgcg
      601 acggatcacg ctgatggcgc tggcggcgtt cattgccggc ttcatcgaga catcgagcgt
      661 ctccttcctg ccggtgctga gcctgcatgc gcactggccg atcgtgagca ctctggcact
      721 cggcgtcttt accctgggtg gaacgctgct gcagcttccg atcggttacc tggccgacaa
      781 actgggctat cgggtggcgc aactgatcac ggccggggtg atcatcggct caagtgcgac
      841 cttcattgtg atgggccatc agttcgtacc attgctgatc acgctcttca cgctgggcgg
      901 ggccgcgggc gcgatgaata ccctggcggt gatcgaagcc ggctcctcgg tggccgccaa
      961 cctgattgcc gacgccgcag cgcgcgtcgc gctggcctat acggtgggca gcatcatcgg
     1021 accgccgatc ctcggcttcc tggtttcgat cctgggaccg acttcctttc cgtttgtctt
     1081 cgcgacgatt ggcgtggcct tttgtgccgc gcgcctgctg gcacggcctc aggcctcggg
     1141 cgtgaagacc acgttgccga cggcggtgtt cgaagccggt acgtgataga agcggtagag
     1201 ctcgcgaatc ttcggcccga gcgcaccgcg catcgtcagc cacatgatca gctccatccc
     1261 ctcggaaccg gcttcgcgga cgtactccgc atgcgacatg gtgcgcaacg catccgggtc
     1321 cgaggtcagc tgatccagga aacgggtgtc ccattcgcgg ttgatgagac cggcgcgctc
     1381 gcctgacagc tgatggctca tgccgccagt accccagacc tggacgttca gatcctcggg
     1441 gtaagacttc acggcgcggg cgatcgcctc ccccaggcgg aaacagcggt tcgcggtcgg
     1501 cgtcggatac tggatgacgt tgactgccag cgggatgacc ttcaccggcc attcactggg
     1561 ttgccccaga accagagaga gcggcacggt caagccgtgg tcgacgttca tctcattcat
     1621 gatggtcaga tcaaactcat cgagcaccac gctggtggcg atgtgccagg caagcttcga
     1681 atgaccttgg acgatcggca cgcgccgcgg tccccacccc tcatcggcgg gcgcgaatga
     1741 atcggcgcag ccgatcgcaa aggtgggcac gacgtccagg gaaaaagccg aggcgtggtc
     1801 gttgtagacc aggatgatga cgtctggttt ctgctcggcg acccagttac gagtccactc
     1861 gtagccggca aagatcggcg cccaatccgg atgcgccgtg cgaccaccat ccagcgcggc
     1921 accgatcgca ggcacatggc ttgagccaat gcctgcggtg atccgggcca tttagaaacg
     1981 tcccgagatc gacctgagac ccgctggatt gcgtccgccg ctgcgcatca tcgcagcgta
     2041 ctcttcggtc gattgaccgg caaacgaggc cgcgaccgac tgggtcggcc gaccgtcgac
     2101 ggctgcgatc ttgagcacga agaagatatt gccgccgcat tcgagcagcg ccttgaagtc
     2161 acgctgcatg accgcctgct tctgcgcctc gctcatcgcc cactcgtcga ggtaggcacg
     2221 ctcatccgcc ttgaagcgca cgcgattggt cgcgctcatc agtg
//
LOCUS       DATAVD010000859         1569 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3432266, whole genome shotgun sequence.
ACCESSION   DATAVD010000859 DATAVD010000000
VERSION     DATAVD010000859.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3432266"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..353)
                     /locus_tag="VHX39_16480"
     CDS             complement(<1..353)
                     /locus_tag="VHX39_16480"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3992768.1"
                     /translation="MASSKVWFVTGASRGFGRVWAEAALKRGDRVVATARNPQALDEL
                     VKTHGDAVLALPLDVTDRDAVFEAVGRAHRHFGRLDVILTNAGYGYMGAIEELEPEQA
                     RANFDTNVFGTISVI"
     gene            436..1089
                     /locus_tag="VHX39_16485"
     CDS             436..1089
                     /locus_tag="VHX39_16485"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3992769.1"
                     /translation="MSAEMGTMIELAKIPNDLRERKRQLTLDRIAETGLKLFMEHGYE
                     ATTLDAIAAASGISRRTFFHYLKSKEDVLLEHESGKFLHVLRPTFLKQSPKQSPIDAA
                     RKTFLALASTYQTKESVIADRILRSIETLRLRKEALLVQMEQVLAEAMYELWPDETRR
                     PALRLAAIMAMGTLRFAKDNWRQEDAARPLTHYIDEAFDLLAQQSKRRSGTHQDTNG"
     gene            complement(1105..>1569)
                     /locus_tag="VHX39_16490"
     CDS             complement(1105..>1569)
                     /locus_tag="VHX39_16490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012569228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEX3992770.1"
                     /translation="WQDAIKAVFLDRVNIVEHYDRAVRSPTFEIQLPSVVSLKSFVKP
                     TTHPAFTRFNVFLRDRFVCQYCSADDDLTFDHIIPRSKGGQTTWENVVAACSPCNLRK
                     GNLTPQQARMFPRQHPFAPTVHQLHRNGRLFPPNYLHDSWLDYLYWDTELDP"
BASE COUNT          340 a          463 c          465 g          301 t
ORIGIN      
        1 tgaatgacgg atatcgtccc aaaaacattg gtgtcgaaat tggccctggc ctgttcgggc
       61 tccaactcct cgatcgcgcc catatagcca taaccggcat tggtcaggat gacgtcgagc
      121 cgtccgaagt gtcggtgcgc ccgcccgacc gcttcgaaca cggcgtcgcg atccgtgacg
      181 tcgagcggca gggccagcac cgcatcaccg tgggttttga cgagttcatc gagcgcctgt
      241 gggttccggg ccgtggcgac caccctgtcg ccgcgtttca gggcggcctc cgcccagacg
      301 cggccaaacc ctcgcgatgc accggtaacg aaccaaacct ttgacgacgc catgccatct
      361 gctccaaatt acacaagtgc aaaattatac actagtgcaa aatagtgcac ttggtgtaat
      421 tatgtcaagg cgctcgtgag cgccgaaatg ggcacgatga tcgagctggc gaaaatcccg
      481 aacgacctgc gcgaacgcaa acgccagctg acgctggacc ggatcgccga aaccggtctc
      541 aagcttttca tggaacatgg ttatgaagcg acgacgctcg atgcgatcgc ggcggcatcg
      601 ggaatatcgc gtcgcacttt cttccactat ttgaagtcga aagaagatgt tctgctggag
      661 catgagagcg gcaaattcct gcacgttctg cgtcccacct tcctgaagca atcgccgaag
      721 caatcgccaa tcgacgccgc ccggaagact ttcctggccc tggcctccac gtatcagaca
      781 aaggagtccg ttatcgcgga ccgaatcctg cgatcgatcg aaacgcttcg gctgcgcaaa
      841 gaggcgcttc ttgttcagat ggagcaggta ctggcggagg cgatgtacga attatggccg
      901 gatgagaccc ggcggcctgc cctgcggctg gccgccatca tggccatggg cacgcttcgg
      961 ttcgccaagg acaactggcg gcaggaagac gcggcgcgtc cattgacgca ttatatcgat
     1021 gaggccttcg atcttctcgc ccagcagtcg aagcgaagat cgggaacgca tcaagatact
     1081 aacggatagc agccgccatc cgcgctacgg atcgagttcg gtgtcccaat acaaataatc
     1141 gagccagcta tcgtgcagat agttcggcgg gaacagccgg ccgttgcgat gcagttgatg
     1201 caccgttggc gcgaacgggt gttgcctcgg aaacatccgc gcctgctgcg gcgtcaggtt
     1261 gcccttgcgc agattgcacg gcgaacacgc cgcgaccacg ttctcccagg tggtctggcc
     1321 acctttgctg cgcgggatga tgtgatcgaa ggtgagatcg tcgtccgccg agcaatattg
     1381 gcagacgaag cggtcgcgca ggaacacgtt gaaccgggtg aaggccggat gcgtggtcgg
     1441 tttgacgaag gatttcagcg ataccacgct cggcagctga atttcgaacg tcgggctgcg
     1501 caccgcgcga tcgtaatgct cgacgatgtt cacacggtca aggaacaccg ccttgatcgc
     1561 gtcctgcca
//
LOCUS       DATAVD010000860         2092 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1011469, whole genome shotgun sequence.
ACCESSION   DATAVD010000860 DATAVD010000000
VERSION     DATAVD010000860.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1011469"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..892
                     /locus_tag="VHX39_16495"
     CDS             <1..892
                     /locus_tag="VHX39_16495"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992771.1"
                     /translation="PTIGWRGLFLVGLAPALLVLMIRYWVPESPHWLMRMGRYAEARQ
                     SLAWALQCDPDEIDLPAEPPEVERTSWRELFQYPRSMAAACLIGLSQTGGVGLLMWIT
                     ALFVMVLKITPAEASYLMIWVGILGVAGRLLASWMSDVLGRRISGFLIGTAGALTMAL
                     AGYFHDAYIGTTSVSFLLVMAQRFFGDGSYAVIGPHLAEVWPNRLRGSGMGFGYGVGN
                     LGKIIGPLGLAIIVGSSNYVSPRVTLDAIYPAFVFLAYWYFQAALAFLLLGFETKGRT
                     IAEIGRGLDAPQPSTVRVVE"
     gene            1036..>2092
                     /locus_tag="VHX39_16500"
     CDS             1036..>2092
                     /locus_tag="VHX39_16500"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3992772.1"
                     /translation="MTKPTGPLAGIRVIDVTTVVLGPYASQVLGDMGADVIKVETTAG
                     DTTRYIGPSRTAGMGSYFATLNRNKRSLAIDLKRPEAMAALLRLVDTADVFVHNMRIG
                     AAQRLGLDYESLSKRNPRLIYACASGFRKGSSLQEFPAYDDLIQGLSGIASLNAGPDG
                     APRYFPMVVVDKLTGSNLASMIGMALFHRERTGEGQEVHVPMLETILSFALVEHFWHG
                     MFNEPEKGVGYPRVLSPHRRPYRTKDGYISVIAHTDAQWRKLFEVMGSPELIDDPRFS
                     STQARTTHIDALYATLTEGMQHRTTAEWIAELQPADIPCGRAGTLADLFADPYLKETN
                     FFEAVDHPVEGKVLMTAV"
BASE COUNT          354 a          623 c          671 g          444 t
ORIGIN      
        1 cccgacgatc ggctggcgcg gattgtttct ggtcggcctg gcgccggctc tgctggtgct
       61 gatgatccgc tattgggtgc cggaatcgcc gcattggctc atgcgcatgg gccgctacgc
      121 cgaggccagg caatccctcg cctgggcttt gcaatgcgat ccagatgaga tcgacctgcc
      181 ggcggaaccg cccgaggtcg aacgcaccag ctggcgcgaa ttgtttcagt atccaagaag
      241 catggccgcg gcctgcctga tcggcctgag ccagaccggc ggcgtcggtc tgctgatgtg
      301 gatcactgca ctgttcgtga tggtgctgaa aattaccccg gccgaggcct cttacctgat
      361 gatctgggtc ggtattctgg gcgtggcggg acggctgctg gcgtcctgga tgtcggacgt
      421 acttggccgg cggatatcgg ggttcctgat cggcaccgcg ggtgccctga ccatggcatt
      481 ggccggatat ttccacgatg cctatatcgg caccacctcg gtgtccttcc tgctggtcat
      541 ggcgcagcgc ttcttcggcg acggcagcta tgccgtcatc gggccccatc tggccgaggt
      601 ctggccgaac cggctgcgcg gcagcggcat gggttttggt tacggcgtcg gcaatctggg
      661 caagatcatc gggcctctgg gtctcgccat tatcgtcggt tcttcaaact acgtcagtcc
      721 gcgcgtgacg ctcgatgcga tttatccggc gttcgtgttc ctggcttatt ggtacttcca
      781 ggctgcattg gcatttctgc tactgggctt tgagaccaag ggccggacga tcgccgaaat
      841 cggtcgcgga ctcgacgccc cgcagccctc caccgtgcgc gtggtcgagt agcggttccg
      901 gcaacgctgg cggcggccac tcgggatatc agattcttgc gttgcgtgcc gccagcctga
      961 cggcatcggc gtgtcccgct gttgccacgc aagcccgctc cgttcaggct tccctgatgg
     1021 acggaggaga cgcgcgtgac caaaccaacg ggcccgctgg ccggcatcag agtgatcgac
     1081 gttaccaccg tggtgcttgg gccttatgcc tcgcaggtgc ttggcgacat gggtgccgat
     1141 gtgatcaagg tcgagaccac ggcgggcgat accacacgtt atatcgggcc gagccgaacc
     1201 gccggaatgg gatcgtattt cgcgacgttg aaccgcaaca aacgcagcct cgcgatcgat
     1261 ctgaaacggc ccgaggcaat ggcagcgctg ttgcgattgg tcgatactgc cgacgtcttc
     1321 gtgcacaaca tgcgcattgg tgcggcgcag cggctgggtc tggattacga gtcgttgtcc
     1381 aaacgtaacc cgcggctgat ttacgcctgt gccagcggct tccgcaaagg cagctcgttg
     1441 caggagtttc ctgcctatga cgacctgatt caggggctgt caggcattgc ctcgctgaat
     1501 gccggacccg atggggcgcc gcggtatttc cccatggtgg tggtggacaa gctgaccggc
     1561 agcaacctgg cctcgatgat cggcatggcc ctgttccatc gcgaacgcac cggcgagggc
     1621 caggaagtgc acgtccccat gctggaaacc attttgtcct ttgcgctggt ggaacatttc
     1681 tggcacggca tgtttaatga accggaaaag ggcgtcggct atccgcgcgt cttgtcgccg
     1741 catcgccggc cgtatcggac caaggacggc tatatcagtg tgattgctca caccgacgcg
     1801 caatggcgca aattgttcga ggtcatgggc tcgccggagt tgatcgacga cccgcggttc
     1861 agttcgacgc aggctcggac cacgcatatc gacgcgcttt acgccacatt gaccgagggc
     1921 atgcagcacc gcactaccgc cgaatggatc gccgaattac agccggcgga tattccttgc
     1981 ggacgcgcgg ggacgctggc cgatttgttt gctgatccgt acttgaaaga aaccaacttt
     2041 ttcgaagcgg tcgatcatcc ggtcgagggg aaggtgttga tgaccgctgt gc
//
LOCUS       DATAVD010000861         6670 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_268658, whole genome shotgun sequence.
ACCESSION   DATAVD010000861 DATAVD010000000
VERSION     DATAVD010000861.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6670
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_268658"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..379
                     /locus_tag="VHX39_16505"
     CDS             <1..379
                     /locus_tag="VHX39_16505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEX3992773.1"
                     /translation="EVTCFSEVLGRSRETLAHGSNVLVSADLKIEGEAIRVTAQDVAS
                     LDEAAASAGASIRIWLRQTEAVPHIRDLLTRQGAGKGRVILVPRLDADRSVEIALPGG
                     YSVTPRLAQALTILPGVERVDEV"
     gene            complement(549..1499)
                     /gene="ftsY"
                     /locus_tag="VHX39_16510"
     CDS             complement(549..1499)
                     /gene="ftsY"
                     /locus_tag="VHX39_16510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014106369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEX3992774.1"
                     /translation="MALGSFFNRLKEGLSRSTSRITETLTTVFKKRRLDDEALEELEE
                     LLISADLGVDAAARVIAAFRRSRFGKEVTDEEIRQALAEEIAAILQPVAKPLVLDPTL
                     RPHVVLVVGVNGTGKTTTIGKLAQQYHDEGKRAVLVAGDTFRAAAVEQLQIWGQRTGA
                     PVIAGGRNADSAGLAFDALTKAKAADADVLLIDTAGRLHNKAALMEELAKMIRVLRKQ
                     DATAPHSVLLVLDATTGQNAVQQVKVFKEMVDVTGLVVTKLDGSARGGIVVALAETFG
                     LPVHAVGVGEQASDLRPFDAFDFARGLVGSDQLLQDQAVG"
     gene            complement(1499..2728)
                     /gene="mtaB"
                     /locus_tag="VHX39_16515"
     CDS             complement(1499..2728)
                     /gene="mtaB"
                     /locus_tag="VHX39_16515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012226193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HEX3992775.1"
                     /translation="MSVEIVTFGCRLNSYESEVMRGLARDSADTVIVNTCAVTAEAER
                     QARQTIRRLARERPEMRIVVTGCAAQIDPAAWSILPNVHRVLGNFEKLQPASWSDDAG
                     SMIGDIMTARETAAHLVTEFAGRARAFVQVQQGCDHRCTFCVIPFGRGPNRSVPVGAV
                     VAQIRALVDGGYREVVLTGVDIASYGSDLPGRPGLGQLVRRLLALVPDLARLRLSSLD
                     PAAIDEDLWRLIADEPRLMPHLHLSLQAGSGLILKRMRRRHSPEDAASVIERARTARP
                     GIAIGADLIAGFPTETDALFQETLDFVEANALPFLHVFPYSERPGTPAARMPSVPRPL
                     RKERAARLRQAGQATAQTFFRTQQNKTVSILAETDRTGHTEHFAPVRLVSETTPGTLF
                     AGRIVGTSGDALLAEVA"
     gene            2850..4112
                     /locus_tag="VHX39_16520"
     CDS             2850..4112
                     /locus_tag="VHX39_16520"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3992776.1"
                     /translation="MSQNLERPTLSPPKPRPHGAPLALAGIRVADFSHFIAGPLCSMI
                     LADLGAEVIKIEKADGGDDFRRIRPAVTEHEGAPYLWTNRNKKSIALDLKQTAARQIA
                     REIIDRSDVVLENFSTGVMAKFGLDYATVSAANPMLIYASVSAYGRDGALRDRLGFDP
                     ITQAESGFMSVNGEPDRVGLRTGPSIMDMSTAMMTCNAVLAALFARERLGCGQFIENA
                     LFDTAVTMVGFHALNYLVSGDEPTRVGNNSRDTVPTAALETADGPIYVACANDRTWQR
                     LAVQVLERPDLAENPDYAKTPERVRNRDRLMAIIGDILRLQPRAYWLPKMRAAGVPAG
                     AINSIAEAFGSAEMQARDMVHAIPHPVVGSVPNIRLPFQLHGTPLADPVAAPGLSQDA
                     TAILRDMLGYDPERIEQLIEAGAVVRPK"
     gene            complement(4105..4926)
                     /locus_tag="VHX39_16525"
     CDS             complement(4105..4926)
                     /locus_tag="VHX39_16525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992777.1"
                     /translation="MSETLLAELPEDQATGDIAVIYDEIRRFSGVPYVSSLQRYLATM
                     PNVLEWAWAAVRPAMVSGVIPETAWRLANSVRLAPLSAVSNTTRTAWQLDRDAEATIR
                     VIAENFVRVSPVNLMTGASLRMLLTEPPPHGPGIAEPWRPPAMLPPMPGNVDPKSLQP
                     HQRAVLMRFATEVDGAPFIPALYRQLARFPEFLAWLADELVPRLTTPETNAARASFRA
                     AALAAAPAIVERLPGLPHAPVPDAETTRRVLATIDRYAETSPEMTMFGRLILDLI"
     gene            complement(4969..5976)
                     /locus_tag="VHX39_16530"
     CDS             complement(4969..5976)
                     /locus_tag="VHX39_16530"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX3992778.1"
                     /translation="MTDEATLIARRDGRVGRILLNRPRVLNTLTLDMVRACTRALEDF
                     RDDPHVHAVVIEGAGDRAFCAGGDIRALRDGQLSGDRTGVEAFFREEYDLNLLISTYP
                     KPYVALIDGICMGGGIGVSVHGPYRVATEHAMFAMPETAIGFFPDIGGTFFLPRLPGQ
                     LGIYLGLTGLRTTGADAVHSGFATHFTSRNNLPALSAALAEIGVAALARFAEPLPPFT
                     LAPVLTAIDRCCSADTIPEIAARLAAEPGDWAAPALKALHTVSPTALAFTLEAFRRGA
                     NLTLKNALDAEFLLTRTTMAHPDFAEGVRAMVVDKDRRPKWQPARIEDIDQTVVAAMF
                     R"
     gene            6239..>6670
                     /locus_tag="VHX39_16535"
     CDS             6239..>6670
                     /locus_tag="VHX39_16535"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HEX3992779.1"
                     /translation="MRVAIIGQQDFGKATMEAFLNRGDEVAAVFCAPEKGRPDPLRLA
                     AQERGLTVHQLPKLTDPAAIDAMKAANVQVGVMAFVTQFVPQALCEIPTFGTIQFHPS
                     LLPLHRGASSMSWAIILGRKETGFSIFRPTDGLDEGPVILTR"
BASE COUNT         1247 a         2095 c         2114 g         1214 t
ORIGIN      
        1 cgaggtgacc tgcttcagcg aggtcctggg ccgctcgcga gagacgctgg ctcacggctc
       61 gaatgtgctg gtctcggccg accttaagat cgagggtgag gcgatccgcg tgaccgccca
      121 ggatgttgcg tcattggacg aggcggcggc ttcggctggt gcatcgatcc gtatctggtt
      181 gcggcagact gaagcggtgc cacacatccg cgatctgctg acacgtcagg gagccggcaa
      241 gggtcgggtg atcctggtgc cgcgccttga tgccgaccgc agcgtcgaga tcgctctgcc
      301 gggcggttac agcgtgacgc cacgtctcgc gcaggcgttg accattctgc caggtgtcga
      361 acgggtcgac gaggtgtgat tgcctatggc tcgttcagca cggcgtggcc gaacgagatg
      421 ccgacggata tcgacaacat tgcccaggag cttgcgatca tcgcgaactt gccaggcaag
      481 taatggaaca cgcaggctct ccggcaggat ctccgagctc tgacgagagc cgaaatgcgc
      541 gcccggtcct atccgaccgc ctgatcctgc aatagctggt ccgaaccaac caaccctcgg
      601 gcaaagtcga aagcgtcgaa cgggcgaagg tccgaagcct gttcgccaac gccaaccgca
      661 tgcaccggca gtccgaacgt ttccgccaac gccaccacga tcccgccccg cgcgctgcca
      721 tccagcttgg tgaccaccag gccggtcacg tccaccatct ctttgaacac ctttacctgc
      781 tggactgcgt tttggccggt cgtcgcgtcc agtaccaaca gcaccgagtg cggagcggtc
      841 gcatcttgct tgcgcaacac ccggatcatt ttcgccagct cttccatcag cgcggccttg
      901 ttatgcagtc gtcctgccgt atcgatcagc agtacatcgg catccgcagc tttggccttg
      961 gtcagcgcgt caaatgccaa tcccgcggaa tcagcattgc gtcccccggc aatcactgga
     1021 gcgccggtgc gctggcccca aatctgcaac tgctccaccg ccgccgcacg gaacgtatcg
     1081 ccggcgacca gcacggcacg cttgccctcg tcgtgatact gctgcgccaa cttgccgatt
     1141 gtcgtcgtct tgccggtgcc atttacccca accaccagca cgacgtgcgg cctgagcgtc
     1201 ggatcgagca ccagcggttt cgccaccggt tgcaaaatgg cggcgatctc ctccgccagg
     1261 gcctgcctaa tttcctcgtc cgtgacttcc ttgccaaacc gggaccggcg gaacgcggcg
     1321 atcacccgag ctgcggcgtc aacgccaaga tcggctgaaa tcaacaattc ctccagttcc
     1381 tccagcgcct catcgtcgag ccggcgtttc ttgaacacgg tggtaagcgt ttcagtgatc
     1441 cgcgaggtgc tgcgggacaa accctccttg agccggttga agaagcttcc aagtgccatc
     1501 aggccacctc cgccaacagt gcgtcgcccg aggtaccaac gatccgtccg gcgaacagcg
     1561 tcccgggcgt ggtttccgag accagtcgga ctggagcgaa atgctcggtg tgcccggtac
     1621 gatcggtttc cgcgaggatt gacacggtct tgttctgctg ggtccggaag aaggtctggg
     1681 cggtcgcctg acccgcctgg cgaagcctcg ccgcacgttc tttgcgcagc ggccggggca
     1741 ccgacggcat acgggcggca ggggtgcctg gccgttcgct gtacgggaat acgtgcagga
     1801 agggcagggc gtttgcttcg acaaagtcga gcgtttcctg aaatagcgcg tccgtttcag
     1861 tcggaaaacc ggcaatcagg tcggcaccga tcgcgatccc gggccgtgcg gtgcgggcac
     1921 gctcgatcac cgaagcggcg tcttccggcg agtgccgccg cctcatccgc ttcagaataa
     1981 gcccgctgcc agcctgcaaa gacaaatgca gatgcggcat caggcgtggt tcgtccgcga
     2041 tcagacgcca aaggtcttcg tcaatcgccg ccggatcgag cgaggacagc cgcaacctgg
     2101 ccaggtcggg caccaacgcc aacaatcggc gcacgagttg cccgagtccc ggccggccag
     2161 gaagatcgga accgtacgaa gcgatgtcga ccccggtcag caccacttcc cgatacccac
     2221 cgtcaacgag cgcccgtatc tgggcgacca cagcgccgac cggaaccgag cggttgggac
     2281 cacgtccaaa aggaatgacg cagaacgtgc aacgatgatc gcagccttgt tgaacctgaa
     2341 cgaaggcgcg tgcgcggccg gcaaattcgg tcaccaggtg cgccgccgtc tcgcgcgcgg
     2401 tcatgatgtc gccgatcatt gacccagcgt cgtcgctcca gctggcaggt tggagctttt
     2461 cgaagttgcc cagtacgcgg tggacattcg gcaggatcga ccatgcggcc gggtcaatct
     2521 gggctgcgca gccggtcacc acgatccgca tctccggccg ttcgcgtgcc aaacgcctga
     2581 tcgtctgacg ggcctggcgc tcggcctcgg cggtcactgc acaggtgttg acgatcaccg
     2641 tatccgccga atcccgcgcg agcccacgca tcacctcact ttcgtaggag ttcaggcggc
     2701 agccgaaggt gacgatttcc acgctcatgg cgtggcactc ttatccgtcc gtgcgccggg
     2761 caggaagggg gaagcctgcc ggacggtcag atgtcacatg atatcgtgtc cggcagcggc
     2821 atggtacatt cgtgcgcgag gagaatgtca tgtcgcagaa tctggaacgt cccactctat
     2881 cgccgccgaa gccaaggccg catggtgcgc cgctggcgct ggccggcatt cgagtggccg
     2941 atttcagcca tttcatcgcc gggccgctgt gttcgatgat cctcgccgat ctgggcgccg
     3001 aagtgatcaa gatcgagaag gccgatggcg gtgacgactt ccgccgtatc cgtcccgcgg
     3061 tcaccgagca tgagggcgca ccgtatcttt ggaccaatcg caacaaaaag agcatcgcac
     3121 tcgatctgaa acaaaccgcg gcgcggcaga ttgcccgcga gatcatcgat cgatccgatg
     3181 tcgtgctgga aaatttctcc accggcgtga tggcgaagtt cggccttgat tacgcaactg
     3241 tctctgcggc gaacccgatg ctgatttatg cgtcggtgtc ggcctacggg cgcgacggag
     3301 cgctgcggga tcgtctcggg ttcgacccga tcacccaggc cgagtccggc ttcatgtcgg
     3361 taaacggtga gcccgaccgc gttggtttgc gcactggccc gtccatcatg gacatgagca
     3421 cggcgatgat gacctgcaat gccgtcctcg ccgcactgtt tgcgcgtgag cgtctgggct
     3481 gcgggcagtt catcgaaaac gcattgttcg atactgctgt gacgatggtc gggtttcacg
     3541 cgttgaacta cctcgtcagt ggcgatgaac cgacacgcgt cggcaacaac agccgcgaca
     3601 ccgtgccgac cgccgcactg gaaacggcgg atgggccgat ttacgtcgcc tgtgccaacg
     3661 atcggacctg gcagcgcctg gccgtgcagg tgctggagcg cccggatctg gctgaaaatc
     3721 cggattatgc gaagacgccg gagcgggtgc gtaaccgcga caggctgatg gcgatcattg
     3781 gcgacattct gcgattgcaa ccacgggctt attggctgcc gaaaatgcgt gcggccggcg
     3841 tgccggccgg ggccatcaat tccattgcgg aagcgttcgg gtctgccgag atgcaagcgc
     3901 gcgacatggt gcatgcgatc ccgcatccgg tggtggggtc ggtgccgaac attcgtttgc
     3961 cgttccaatt gcacggcact ccgctcgctg atccggtcgc ggcccctggc cttagtcagg
     4021 acgcgacagc gattctgcgt gacatgcttg ggtacgaccc ggaacgaatc gagcagctga
     4081 ttgaggctgg cgcggttgtg cggcctaaat gaggtcaagg ataagccggc cgaacatggt
     4141 catctccgga ctggtctccg cataacgatc gatcgtggcc agcacgcgtc gcgtcgtctc
     4201 ggcgtccggc actggagcat gcggtaaacc aggcaaccgc tcgacaattg ccggcgcggc
     4261 ggccagtgca gcggcgcgga acgaagcgcg cgcggcattg gtttccggtg tggtcagtcg
     4321 cggcaccaac tcgtctgcca gccaggccag gaactccgga aaccgtgcga gttgtcgata
     4381 taaagccgga atgaaagggg caccgtcgac ctcggtggcg aagcgcatca gtacggcacg
     4441 ctggtgtggt tgtaacgact tcggatcgac attgccgggc atcggcggca gcatcgcggg
     4501 cggtctccag ggttcggcga tcccgggtcc gtgcggcgga ggttcggtca acagcattcg
     4561 gagactggcg ccggtcatca gattcactgg cgagacccgc acgaagttct ccgcaatcac
     4621 gcggatggtc gcttcggcgt cgcggtcgag ctgccacgcc gtgcgggtgg tgttcgaaac
     4681 ggctgacaat ggtgcaagcc tcacgctgtt cgccagccgc catgcggttt cgggaattac
     4741 gccggatacc atcgccggcc ggacggcagc ccaggcccat tcgaggacat ttggcatggt
     4801 ggcaagataa cgttgcaatg aggagacgta cggcacaccg gagaaccggc ggatttcatc
     4861 gtaaattacc gcgatgtcac cggttgcctg atcttccggc agctcggcga gcagagtttc
     4921 cgacatggcg tgatccgatc ctgttgctgc ggcgtacagt caataacttc agcgaaacat
     4981 tgcggcgacg acggtttgat cgatgtcctc gatccgtgcc ggttgccatt ttggccgccg
     5041 gtccttgtcg accaccattg cgcgcacgcc ttcggcgaaa tcgggatggg ccattgtagt
     5101 tcgggtcagc aggaactccg catccagtgc gtttttcagc gtgaggtttg cgccgcgtcg
     5161 gaatgcttcc aaagtgaacg cgagggctgt cggcgacaca gtgtggagtg ccttgagcgc
     5221 gggagccgcc caatcgccgg gctcggcagc aaggcgggca gcgatttccg gaatggtatc
     5281 ggcggaacag catcgatcga ttgcggtcag gaccggtgca agtgtgaacg gaggcagcgg
     5341 ctcggcgaac cgcgccaaag ccgcgacgcc aatttccgcc aacgcagcag acaaagcggg
     5401 cagattattc cgggatgtga aatgcgttgc gaacccggaa tgcacggcgt ctgcgccagt
     5461 ggtgcgcaat ccggtcagcc ccagataaat cccgagttgg cccggcaacc tgggcagaaa
     5521 gaacgtgccg ccaatgtcgg ggaagaaccc gatcgcggtt tccggcatgg cgaacatcgc
     5581 gtgctcggtc gccacgcggt acggcccgtg caccgagacg ccaattccgc cgcccatgca
     5641 gatgccgtct atcagtgcga cgtagggctt ggggtaggtc gagatcagca ggttgaggtc
     5701 gtattcctca cggaagaacg cttcgacccc ggttcgatcg cccgacagct ggccgtcgcg
     5761 caaggcacga atgtcgccgc cggcacagaa ggctcgatcg ccggcgccct cgatgaccac
     5821 ggcatggaca tgggggtcgt cgcgaaaatc ttccaacgcg cgggtgcagg cccggaccat
     5881 gtcgagggtc aatgtgttca gcacgcgtgg acggttgagc aggatgcgcc cgacccggcc
     5941 gtcgcggcgg gcgatcaaag tggcttcgtc ggtcatcgcg atctccggct gatgttgggt
     6001 gcagttcctg gtttgccgga agccggtgca cctctcaagt gcagccgcca aatacgtgag
     6061 aatgggagac gctattttgt ggagggcctt ttcgagaaca gtggccccgt cttttggcct
     6121 gcccgaccgc attgcttcgg agaagcgcca ccaaaccgga tcggcctgcc tgtgcaccct
     6181 cgacatcccc gccgggtccg atcaaaactc ccgccaacgg aacggcggga ggacaccaat
     6241 gcgcgtcgcc attatcggcc aacaggactt cggcaaagcc accatggagg cattcctgaa
     6301 ccgcggcgat gaggttgccg ccgtgttctg cgcccccgag aaaggccgcc ccgacccgct
     6361 gcgcctcgcc gcgcaggaac gcgggctgac agtgcatcaa ttgcccaagc taaccgaccc
     6421 ggctgcaatc gacgcaatga aagcggcgaa tgtccaggtc ggcgtcatgg ccttcgtgac
     6481 ccagttcgtc ccgcaggctc tgtgtgagat cccgacattc ggcacgatcc agttccatcc
     6541 cagcctgctg ccgttgcacc gtggcgcctc atcgatgagc tgggccatca tcctcggtcg
     6601 caaggagacc gggttcagca ttttccgccc gaccgacggg ctcgatgagg gcccggtgat
     6661 cctgacccga
//
LOCUS       DATAVD010000862         1642 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1571682, whole genome shotgun sequence.
ACCESSION   DATAVD010000862 DATAVD010000000
VERSION     DATAVD010000862.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1642
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1571682"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(76..1152)
                     /locus_tag="VHX39_16540"
     CDS             complement(76..1152)
                     /locus_tag="VHX39_16540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992780.1"
                     /translation="MPFDSRRIHDVPDDLLAAIDYCFEQGWTDGLPVIPPVVDRVDAT
                     LAFEGRPPEAVIATHPATGLQLTVHAAAVNAVMAGCLPEYFPVLVAAFEAMDKPDFNF
                     HGSTASTGGSAPLLIVSGLVAEDIGMNADVNLFGPGNRANATIGRAVRLILRNVFQMI
                     PGISDKSTQGNPGKYSFCIAERSRGNPWTLLCETQDYPPGVSSVTVFAAGGFCNVENH
                     GGNTPEHILSSVADAMANYGCITLGQSVVILSPEHMRIVAEAGWSRADAQHFLFTHAK
                     RSVAGMQSVGKYRDSEYDGQHGTDAHALVEPGFVHRGMRPDDILITMGGGDAGGHSCF
                     IPSWSRGRGSVMQHKPIGVCIDCT"
     gene            1299..>1642
                     /locus_tag="VHX39_16545"
     CDS             1299..>1642
                     /locus_tag="VHX39_16545"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX3992781.1"
                     /translation="MARVTEFDPASAGWTLMEANPLPAGIGEPWHRRQAEAWQYGLLT
                     RADHANPAGAVHGGILAVFADHTLGCYVEAAGDGAPNVTIQLNTHFLAAVDPGSFLEL
                     RGEVTRVTGTMV"
BASE COUNT          298 a          537 c          515 g          292 t
ORIGIN      
        1 agcagcggtg gtgcgcggaa caaggttcgt tccggccccg acgatgtcgg gtcgtataat
       61 cgcatcagtt ccctcctatg tgcagtcgat gcaaaccccg atcggtttgt gctgcatgac
      121 ggagccgcgg ccacggctcc acgatggaat gaaacaggag tgcccgccgg catccccgcc
      181 gcccatggtg atcaggatat cgtcgggcct catgccgcga tgcacgaaac caggttcgac
      241 caaagcgtgc gcgtcggtgc cgtgctggcc gtcgtattcg ctgtcgcggt acttgccgac
      301 cgactgcatt cctgcaacgg atcgtttggc gtgcgtgaac aggaagtgct gtgcatccgc
      361 gcggctccag ccggcttccg caacgatgcg catgtgctcg ggcgacagga tgacgacgct
      421 ttgacccagt gtgatgcagc cgtaattggc catggcgtcg gcaacactgg aaagtatgtg
      481 ctcgggtgtg ttgccgccgt gattctcgac gttgcagaac ccgccggcgg cgaacacggt
      541 tacgctggac acgcccggcg gataatcctg cgtttcgcac agcagcgtcc acggattgcc
      601 gcgtgagcgt tcggcaatgc agaagctgta tttacccgga ttgccctgcg tcgacttgtc
      661 ggaaatgccc gggatcatct gaaacacgtt acgcaaaatc aaccgcaccg cgcgcccgat
      721 cgtcgcgttc gcccggttcc ctgggccgaa caaattcacg tcggcattca taccgatatc
      781 ttcggcaacc aggccgctga caatcagcag aggtgccgaa ccgcccgtgc tggcagtcga
      841 gccgtggaag ttgaagtccg gcttgtccat cgcctcgaac gcagcgacca ggaccgggaa
      901 atactccggc agacagcccg ccatgacggc gttcaccgca gcggcgtgca cggtcagttg
      961 caggccggtg gcggggtggg tcgcgatcac cgcctcaggc ggccggccct caaaggcgag
     1021 cgtggcgtcg acccggtcga ccaccggagg gatgacagga aggccgtcag tccagccctg
     1081 ctcgaagcaa taatcgatgg cggcgagcag gtcgtccggg acgtcgtgga tgcggcggga
     1141 gtcgaagggc atggtgcaaa cgctcctctc ttgggcccct tataaacctt tcccaacgtc
     1201 tcagccatca accgcgcggt tgcagcacgc cctcacatcc cgcattttgc ggtcatgaca
     1261 aatcgagctt ttccgaccca gcgtgccggc ggtcagccgt ggcccgcgtg accgagttcg
     1321 accccgcctc ggccggttgg acattgatgg aggccaaccc cttgcccgcc ggcatcggcg
     1381 agccctggca caggcgccag gcagaggcat ggcagtacgg cctgctcacg cgagcggatc
     1441 acgccaatcc cgccggcgca gtccacggcg gcatcctcgc cgttttcgcc gatcacaccc
     1501 tgggctgcta tgtcgaggca gcgggcgatg gcgcgcccaa cgtcaccatc cagttgaaca
     1561 cccacttcct ggccgcagtc gatcccggat ccttcctgga actgcgcggc gaggtgaccc
     1621 gcgtcaccgg cacgatggtg tt
//
LOCUS       DATAVD010000863         2958 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2314241, whole genome shotgun sequence.
ACCESSION   DATAVD010000863 DATAVD010000000
VERSION     DATAVD010000863.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2958
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2314241"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1022
                     /locus_tag="VHX39_16550"
     CDS             <1..1022
                     /locus_tag="VHX39_16550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992782.1"
                     /translation="KNLRCNSLGLSGTTLAVAHQTDKPGQPGAGMNVYDVADPAQPKL
                     LSHFDTSGAHSRGTHYLWFADPHYAYLSTGAKDFTPHNQLDDQFLMIVDMTDPSHPKE
                     TGRWWLPGTRVGDTEPPPPRVHPFDSGIRMHTPTIAAGEPDRLYVGWIDGGWMILDTS
                     DKAHPKLVAHRSWQSQDEGFAHTVVAIPSRGIAIQTEEAIGEKCKDWPKRDSVWDISN
                     EQAPYPLSFLPPPADFDALCKAGGRFGAHNIHQNRPDPTAAHLTKTVVGSFFAGGVRA
                     YSIADPHAPVEIGYLVDAAPPANPSHTIQINDVYVDEHGLIYANDRFTGGLDIIRYTG
                     TVPLE"
     gene            1060..1668
                     /locus_tag="VHX39_16555"
     CDS             1060..1668
                     /locus_tag="VHX39_16555"
                     /inference="COORDINATES: protein motif:HMM:NF012273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX3992783.1"
                     /translation="MLRIHGSARSRTQRTLWMLFELGIPFEHDDLLPRSPGTKTPEFL
                     ALNPNSRVPVIEDDGFVLTESMAINLYLAKKHNSPLYPSDPRNEALAWQWSFWEVDRL
                     DRTLANYLTHTTILPEAERDKAIADAAWAEVEPAMNVLNGALSKNRWLAGTEFSVADL
                     NVASALWRCLGMDLTRWPALRDWFERCWNRPAGKKARAAREG"
     gene            1738..2688
                     /gene="pip"
                     /locus_tag="VHX39_16560"
     CDS             1738..2688
                     /gene="pip"
                     /locus_tag="VHX39_16560"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HEX3992784.1"
                     /translation="MPRGDLFPEIGPYETGYLPVSTSHVMYWEQAGNPRGFPVLFLHG
                     GPGAGAGAVHRRFFDPGFWRIVIFDQRGAGRSRPLGGLEENTTPHLVEDIERLRGHLG
                     IDRFLLFGGSWGSTLALAYAQTHPRRVAACVLRGIFLGRASEVNWFLHGIATVFPEVH
                     TQFVGHLPEHERHDVLGSFLLRLVDPDPAVHMPAARAWSIFEGTCSTLLPSPDTITTF
                     AQDRTALGLARIEAWYFANNLFLPSGGLLAHMDKVRGIPAEIVQGRYDMICPPTTAFE
                     LANAWHGARLTVVPDAGHSALEPGIRRALVSAVERFRALR"
     gene            2609..>2958
                     /locus_tag="VHX39_16565"
     CDS             2609..>2958
                     /locus_tag="VHX39_16565"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX3992785.1"
                     /translation="MPVIRRWNRASAVLWSRQWNGSARFDRETIAMKVGVIGLGSMGM
                     GAALNLHRKGHAVTGCEVREAARAEFEAAQGRTVSRADQLPADLEAVVVFVINAAQTE
                     DVLFGPAGCLSRLN"
BASE COUNT          542 a          968 c          897 g          551 t
ORIGIN      
        1 gcaaaaacct ccgctgcaat tccctcggct tgtccggcac gacgcttgcc gttgcgcatc
       61 agaccgacaa accgggacag cccggagccg gaatgaatgt ttacgacgtt gccgatccgg
      121 cacagccgaa actgctgtcg catttcgaca cctcgggcgc gcattcccgc ggcacgcatt
      181 atctgtggtt tgccgacccg cactacgctt atttgtcgac cggcgcgaag gacttcacgc
      241 cgcacaatca actggacgat cagttcctga tgatcgtcga catgaccgat ccgtcgcatc
      301 cgaaagaaac cggccgctgg tggctgcctg gcacacgcgt cggcgacacg gaaccgccgc
      361 cgccacgcgt gcatcccttc gactccggga ttcgtatgca cacgccaacg attgccgccg
      421 gcgagccaga ccggctctat gtcggatgga tcgatggcgg ctggatgatc ctggatacgt
      481 ccgacaaagc gcatccaaaa ttggtcgccc accggtcctg gcagtcgcag gacgaggggt
      541 tcgcccacac ggtggtggca attccgtcgc gtggcattgc aatccaaacc gaggaagcca
      601 tcggcgagaa atgcaaggac tggccgaagc gagactcggt ctgggacatt tccaacgagc
      661 aggcaccgta cccgctgtcg ttcctgccgc cgcccgccga ttttgatgcg ttatgcaagg
      721 ccggcggccg cttcggtgcg cataacatcc accagaaccg gccggaccca acggctgcgc
      781 atctgaccaa gaccgtggtc ggcagtttct ttgccggcgg ggttcgggcc tactcgatcg
      841 ccgatccgca cgctccggtg gaaatcggtt atctggtcga cgccgcgccg cccgccaatc
      901 cctcgcacac gatccaaatc aacgatgtct atgtcgatga gcatggcctg atctatgcca
      961 acgaccgatt caccggaggg ctggacatca tccgctacac aggcactgta ccgctggaat
     1021 gactcctcaa tctcccagcg ccgacaaaag ggaaatccca tgctccggat tcacggctcc
     1081 gcccgctccc gcacccaacg cacattatgg atgctcttcg aactaggtat cccgttcgag
     1141 catgatgacc tgttgcccag atcccccggc accaaaaccc ccgaatttct ggcactgaac
     1201 ccgaattccc gcgtcccggt gatcgaggat gacggcttcg tgctgaccga gtcgatggcg
     1261 atcaacctct acctcgccaa aaagcacaac agcccgctct atccgtcgga tccgcgcaac
     1321 gaagcgctcg cctggcagtg gagtttctgg gaagtcgacc ggcttgaccg cacgcttgcc
     1381 aactacctga cccacaccac cattctcccc gaagccgaac gcgacaaagc tatcgccgat
     1441 gcggcctggg ccgaggtcga accggccatg aatgtgctga acggcgctct cagcaaaaac
     1501 cgttggctgg ccgggacgga attctcggtt gccgatctca acgttgcctc tgcgttgtgg
     1561 cgctgcctcg ggatggacct gacacgctgg cccgctttgc gcgactggtt cgagcgttgc
     1621 tggaaccggc ctgccgggaa aaaagcccgg gcggcgcgcg aaggctgaac ccaacaaccc
     1681 gcgcgagcgg agaaaatcag ttccacccgc tcgcgctccc ctatacgatc cactgcgatg
     1741 cccagaggcg accttttccc tgagatagga ccctacgaga ccggttacct gccggtctcg
     1801 acctcccacg tgatgtactg ggagcaagcg ggcaatcctc gcggtttccc ggtgctgttt
     1861 ctgcacggcg gacccggggc cggcgccggc gcggtgcatc gccggttctt cgatccgggc
     1921 ttctggcgca tcgtcatctt cgatcagcga ggcgccggcc ggtcgcgacc cctgggcggg
     1981 ctggaagaaa acaccacgcc gcatctggtc gaggatatcg agcggctgcg tggtcacttg
     2041 ggcatcgacc ggtttctgtt gttcggtggc tcctggggct caacgctcgc actggcctat
     2101 gcgcagaccc atccgcgacg cgtggcggcg tgcgttttgc gtggcatctt cctcggccgg
     2161 gcttccgagg tgaactggtt cctgcacggg atcgcaacgg tcttccccga agtgcacacc
     2221 cagtttgtgg gacatttgcc ggaacatgag cgccacgatg tactgggatc gttcctgctg
     2281 cgactggtcg atccggaccc ggccgtgcac atgcccgccg cccgcgcctg gtcgattttc
     2341 gagggcacgt gcagcacctt gctgccgagt cctgacacca tcacgacatt cgcacaggac
     2401 cggacggcac tgggtctggc acgcatcgag gcctggtact tcgccaacaa tctgttcctg
     2461 ccgtccggcg gcctgctggc gcatatggat aaggtgcgcg gcatcccggc ggagatcgtg
     2521 caaggccgtt acgatatgat ctgtccgccg actacggcgt tcgagctcgc caatgcgtgg
     2581 catggggcgc ggctgacggt ggtgcccgat gccggtcatt cggcgttgga accgggcatc
     2641 cgccgtgctt tggtctcggc agtggaacgg ttccgcgcgc ttcgataggg agacaatcgc
     2701 aatgaaagtc ggcgtgatcg gcctcggctc gatgggcatg ggggcggcgt tgaacctgca
     2761 tcgcaaaggc cacgcggtga ccggctgtga ggtgcgggaa gccgcccgcg ccgaattcga
     2821 ggcggcgcag gggcgcaccg tcagccgcgc tgatcaactg ccggccgatc tggaagcggt
     2881 tgtcgtattc gtgattaatg ccgcgcaaac cgaggatgtg ttgttcgggc cggccggctg
     2941 tctgtcccgg ttgaacaa
//
LOCUS       DATAVD010000864         3110 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_830441, whole genome shotgun sequence.
ACCESSION   DATAVD010000864 DATAVD010000000
VERSION     DATAVD010000864.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3110
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_830441"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..364
                     /locus_tag="VHX39_16570"
     CDS             <1..364
                     /locus_tag="VHX39_16570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019084755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEX3992786.1"
                     /translation="ITAATFAATSVYGYTTKSDLTRMGGFLMMGLFGIIIASLVNMFM
                     HSAALQYAISYIGVVIFVGLTAYDTQRIKADYVQYAYAEGTDLAARRGVYDALSLYLN
                     FINLFMFMLQIMGVRNNN"
     gene            545..1732
                     /locus_tag="VHX39_16575"
     CDS             545..1732
                     /locus_tag="VHX39_16575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3992787.1"
                     /translation="MHKRNFMAALVAAMALTCGIAFAQTVKVGVINTYTGPLAAAGDQ
                     MQRGIDLYMKLHQKDLPPGVSIELIKRDDTGPNPEVAKRLAQELITRDKVQLLTGVIW
                     TPNALSVAPLLTEAKVPLIIMNAGTSMITTKSPYIARVSFTLWQSSYPLGSWAAKNGL
                     KNVYTLVSDYGPGIDAEAAFTKAFTEGGGTIAGSVRMPVQAPDFVPFLQRAKDAKPDA
                     VFCFVPAAKAATAFMKAFDDLGLRAAGIKLIGPGDITTDEELPGMGDVAIGTITMHHY
                     SAAGDRPANKAFVAAYKAAYGAKDEPSFLAADSYDGMAAIFHVVIAQKGNIDPDKTMD
                     LLKGWKYDSPRGPIMIDPETRDIVQNEYLRRVDKVNGQLQNTEIETIPMVKDPWKEIN
                     KAK"
     gene            1746..2618
                     /locus_tag="VHX39_16580"
     CDS             1746..2618
                     /locus_tag="VHX39_16580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3992788.1"
                     /translation="MEAILDALVSILFLGLGFAMVLYIVSVGLSLTMGLMGFVNLAHG
                     AFAMAGGYVAVTLMNTYQVPFGLALAAAFIVIGVVSAVLERTLYARLYGAGELEQVLF
                     TIGLIFMAEALLRKAFGPIPLPMHPPSMLSGQFNLGFRTVPAYRAFLIVVSFALILAL
                     WLGIDRTNFGARLRAAVDNRRMAEAIGIDTSLLFTLTFALGSGLAALGGGLGADILAI
                     YPGYAIEYLVYFLMVVAVGGLGSIRGPFVAALILGIGDTACKYLVPEFGAFFVYIVMI
                     GLLIWRPAGLFGRA"
     gene            2619..>3110
                     /locus_tag="VHX39_16585"
     CDS             2619..>3110
                     /locus_tag="VHX39_16585"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3992789.1"
                     /translation="MATDPVSAALRRSGLRWIEAIPWIVAVGGYFVFPDQLPFASQIL
                     ITILFALSLDLVLGFAGIITLGQAAFYGTGAYAAGIYAIHVSQEPLSGLLVAAASAAL
                     VGAVSGLVILRTHGLAQLMLTLAFATLLAEAANKASFITGGNDGLQGIAIDPIAGLFR
                     FDMF"
BASE COUNT          549 a          945 c          946 g          670 t
ORIGIN      
        1 catcaccgcc gccactttcg ccgcgaccag cgtctatggc tacacgacca agtccgacct
       61 gacgcgtatg ggcggcttcc tgatgatggg cctgttcggc atcatcatcg ccagcctggt
      121 caatatgttc atgcacagcg ccgcgctgca gtatgccatc agctatatcg gcgtggtgat
      181 ctttgtcggg ctgaccgctt atgacacgca gcggatcaag gctgactacg tgcaatacgc
      241 ttacgccgaa ggcaccgacc tggcggcgcg gcgtggagtg tatgacgcgc tgagcctgta
      301 tctgaacttc atcaacctgt tcatgttcat gctgcagatc atgggcgtac ggaacaacaa
      361 ctgaccgtcc cggcctgccg gtacgactga cggaagcccc gaggcattgc ctcggggctt
      421 ttgctttggg tggagcgcag gcgaccgtgc ttcgcatgga acatgcgagg ccaattgcag
      481 cgtccggccg cctgcctata gtgtcgcttc ggaaccggca gcctatcggg gagacggaac
      541 gataatgcat aaacgtaact tcatggcggc gctggtcgcc gcgatggcac tcacctgcgg
      601 catcgcgttc gcgcagaccg tgaaggtcgg ggtgatcaac acctataccg gaccgcttgc
      661 cgctgccggg gaccagatgc agcgcggtat cgatctgtat atgaagctgc atcaaaagga
      721 tttgccgccc ggcgtatcca ttgagttgat caaacgcgac gacaccggtc ccaatcccga
      781 ggtcgccaaa cggctggccc aggaactgat cacccgcgat aaggtgcagt tgttgaccgg
      841 cgtgatctgg accccgaacg cgctgtcggt cgccccgctg ctgaccgagg cgaaggtccc
      901 gctgatcatc atgaatgccg gcacctcgat gatcactacg aagtcgccct atattgcccg
      961 cgtctccttc accctctggc agtcctccta tccgcttggc tcctgggcgg cgaagaacgg
     1021 tctgaagaac gtttacaccc tggtctccga ctacggtccc gggatcgacg ccgaggccgc
     1081 gttcaccaaa gcgttcaccg agggcggcgg caccatcgcc ggctcggtcc gcatgccggt
     1141 acaggctccc gattttgtgc cgttcctgca acgtgccaaa gatgccaaac cggacgccgt
     1201 gttctgcttc gtgccggcgg ccaaggcggc gaccgccttc atgaaagcgt tcgacgacct
     1261 tggcctgcgc gccgccggca tcaagctgat cggacctggc gacatcacga ccgatgagga
     1321 actgcctggc atgggcgatg tggcgatcgg caccatcacc atgcatcatt acagtgcggc
     1381 cggcgaccgg cctgccaaca aagcgttcgt cgccgcctat aaggccgcgt acggggccaa
     1441 ggatgagccc agtttcctgg cggcggactc gtatgacggc atggcggcga tcttccatgt
     1501 tgtgattgcg cagaagggca acatcgaccc cgacaaaacg atggatctgc taaaaggctg
     1561 gaaatacgac agcccgcgcg ggccgatcat gatcgacccg gaaacccgcg acatcgtgca
     1621 gaatgagtat ctgcgacggg tcgacaaggt caacggccag ttgcagaata ctgagattga
     1681 aacgatcccg atggtcaagg atccctggaa ggaaatcaac aaggcgaagt aatcagcctg
     1741 acgtgatgga agcgatcctc gacgccctgg tcagcatcct gtttcttggc ctcggcttcg
     1801 cgatggtgct gtacatcgtg tcggtcggac tatcgctgac catggggttg atggggttcg
     1861 tgaacctcgc gcatggtgcc ttcgcgatgg ccggcggcta cgtcgcggtg acgctgatga
     1921 atacgtacca ggtgccgttt ggactggcac ttgcggctgc attcatcgtc attggcgtag
     1981 tcagcgccgt cctggaacgc acgctttacg cacggctcta cggcgccggg gagctggagc
     2041 aggtcctgtt caccatcggc ctgattttca tggccgaggc actgttgcgc aaagccttcg
     2101 gtccgattcc gttgccgatg catccacctt caatgctcag cggtcagttc aaccttgggt
     2161 tccgcactgt gccggcgtac cgcgccttcc tgattgtcgt gagtttcgcg ctgatcctgg
     2221 cgttgtggct tggcatcgat cgcacgaact tcggtgcgcg cctgcgcgct gccgtcgaca
     2281 accggcggat ggcggaggcg atcggcatcg acacatcgtt gctgttcact ttgacctttg
     2341 ctctgggttc cggccttgcc gcactgggtg gcgggctcgg tgccgatatc ctggcgatct
     2401 atccaggcta tgccatcgaa tatctggtct attttctgat ggtcgtcgca gtcggcggtc
     2461 tcggctcgat ccgcggcccg ttcgttgctg cattgatact ggggatcggc gacacggcct
     2521 gcaaatacct ggtgcccgag tttggcgcct tcttcgttta tatcgtcatg atcggcctgt
     2581 tgatatggcg gcccgccggc ttgttcggac gcgcctgaat ggcgaccgac cccgtgagcg
     2641 cggcattgcg ccggagcggt ctgcgctgga tcgaagccat cccctggatc gttgcggttg
     2701 gcgggtattt cgtctttcca gaccagctcc cgtttgccag tcaaatattg atcaccattt
     2761 tgttcgcttt gtcgcttgat ctggtgcttg ggttcgccgg catcatcacc ctcggccagg
     2821 cggcgtttta cgggaccggc gcctatgcgg ccggcattta cgcaatccac gtctcgcagg
     2881 aaccgttgtc cggtctgttg gttgcggcgg cgtcagcggc gttggtcggc gccgtctccg
     2941 gccttgtcat tctgcgcacg cacggattgg cgcagttgat gctgacattg gcgttcgcga
     3001 ccttgctcgc ggaggcagcg aacaaagcca gcttcatcac cggcggcaac gatggactgc
     3061 aagggatcgc gatcgatccg attgccggcc tgttccgctt cgacatgttc
//
LOCUS       DATAVD010000865         3336 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1572066, whole genome shotgun sequence.
ACCESSION   DATAVD010000865 DATAVD010000000
VERSION     DATAVD010000865.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3336
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1572066"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1373)
                     /locus_tag="VHX39_16590"
     CDS             complement(<1..1373)
                     /locus_tag="VHX39_16590"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3992790.1"
                     /translation="MAAQPARLPAVIRIFHMFGLNLEFPLLLSSVLQHGAANFGAVPV
                     VSINRDEHVRLDYRTVAERARRLASSLLRLGFGPDEMAGSLAWNSHRHFELFYGVTGV
                     GAVLHTANPRLPPAQICYTINFAGYRTLFVDLDTIELAESLASRLSSVQQYIVMAGRE
                     AMPATTLPNVSCYEDLLDSGDADFVWPVLDERSACLLCFTSGTTGDPKGALYSHRGTV
                     LSAMSTGAGNGWGLSADDAILAIPGFFHCNGWAIPFFGPMYGAKLVLPGRRADTPWLH
                     QLIVDEAITVGPGVPTIWLSMLDYCRSRKLDLGKLNRIYSGGTAPPAAMIEAFLHEFG
                     VRTIHGWGMTETTSGSTISFAPRALPGAAALTVMGTPGKPLFGNEIRIVDDNDLPLLQ
                     DGQTPGHLQVRGAWIAGGYFRRPDVDAVSADGWLRTGDVATIDPENTLHIVDRAKDVI
                     KSGGEWI"
     gene            1448..2362
                     /locus_tag="VHX39_16595"
     CDS             1448..2362
                     /locus_tag="VHX39_16595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3992791.1"
                     /translation="MTGLMEGKVVVVTGAGGGVGREIAIMMAKSGARLIIADIGASLS
                     GEGGSTTPAEQTKALINQQGGLAEICAESVAAWGSARKIVQAALDHYGRIDAVVNNAG
                     ILRDGIFHRMSADDWLSVINVHLNGSFFVSRAAAEHFRVQESGALVHITSTSGLVGNI
                     GQANYAAAKLGITALSKSIALDMARYNVRSNCLSPWAWSRMTSSIPTNTPEQAAAVEK
                     LKQLTPDKNAPLAVFLCSDAAKGVTGQVFGTRMHEIYLFSSPRPVRIVHRAEGWTPES
                     IAAIAAPALANGFMPLDTSETLFNWDPV"
     gene            complement(2368..3150)
                     /locus_tag="VHX39_16600"
     CDS             complement(2368..3150)
                     /locus_tag="VHX39_16600"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX3992792.1"
                     /translation="MSYDPGPAAAALRRARLERRLVLPLSDAVTPRTEAEGAAAQLAL
                     ARLVGATPPAGFKIGATGKRMQEYLGLTGPAAGFMESGNVFRDDGAVRFADCIKPGVE
                     CEVAMRLARDLPPGSYTSEEVAAAVGEFVAGIEIVENRYDDLRTLGTPTLIADQVYHV
                     AAVLGSSRGADWRALETGALRGRILIDGIERDAGITTDLMGHPLTCLAWLAGSSVAAA
                     FGGLRVGQCVMLGSVTPPVWLDAPARITVEFEGLPAVTASLS"
     gene            complement(3147..>3336)
                     /locus_tag="VHX39_16605"
     CDS             complement(3147..>3336)
                     /locus_tag="VHX39_16605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012812634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HEX3992793.1"
                     /translation="LSGPFFAGRRVALVLGAEGDGLRRLTRETCDEIAGLSIKGVVES
                     LNVSSAAAVALYELTRAT"
BASE COUNT          696 a         1046 c         1004 g          590 t
ORIGIN      
        1 ctgatccatt cgccgccgga tttgatgaca tccttcgctc gatcgacgat atgaagcgta
       61 ttttcgggat cgatcgttgc cacatcgccg gtgcgcaacc agccatccgc gctgacggca
      121 tcgacgtcag ggcgccggaa ataaccaccg gcaatccatg cgccgcgcac ctgcaaatgc
      181 ccgggagtct ggccatcctg aagcaacgga aggtcattgt catcgacgat gcgaatctcg
      241 ttgccgaaca atggctttcc tggtgtgccc atgaccgtta acgccgctgc ccccggtaag
      301 gctcgcggcg cgaacgagat cgtcgatccg ctggttgtct cggtcatgcc ccatccatgg
      361 atcgttctga ccccgaactc gtgcaaaaag gcctcgatca tcgcggccgg aggcgcggta
      421 ccaccagaat aaatccggtt cagctttcca agatccagtt tccgactgcg gcaataatcc
      481 agcatcgaca gccagatggt cggcacgccg ggacccaccg taatggcttc atcgacaatc
      541 agttgatgca accaaggggt atccgcgcgc cgtccgggaa gcacgagttt tgcaccgtac
      601 atcggcccga agaacggtat cgcccagccg ttgcagtgga aaaacccggg aatcgcgaga
      661 atagcgtcgt cggcactcag accccagcca ttgccggcgc cggtggacat ggccgaaagc
      721 acggtgcctc ggtgactgta tagtgcgccc ttcggatcgc cggttgtccc ggaggtgaaa
      781 catagtaggc acgcgctgcg ctcgtccagc actggccaaa caaaatcggc atccccggag
      841 tcgagcaaat cctcgtaaca actgacgttg ggcaaggtgg tggccggcat tgcctcccga
      901 ccggccatca cgatatattg ctgcacggaa ctcagtcgtg acgcgagact ttccgccagt
      961 tcgatcgtat cgagatcgac aaacagcgtc cggtagccgg cgaaattgat cgtgtaacaa
     1021 atttgcgccg gcggcagccg cggattggcg gtgtgaagca ctgcgcctac accggtcacg
     1081 ccgtaaaaca attcgaaatg ccggtgcgag ttccatgcca gtgatcccgc catctcgtcc
     1141 ggcccgaacc ccaatcgaag caggctggac gccagacggc gcgcccgctc cgccacggtt
     1201 cggtagtcca gccgaacgtg ctcgtcacga ttgatcgaca ccaccggtac ggcgccgaag
     1261 tttgccgcgc cgtgttgcag aacggacgat aacaacaatg ggaattccaa attcagacca
     1321 aacatatgga agatccggat gaccgccggc agtctggcgg gttgcgccgc catggtccag
     1381 atccgctgcg ctcgacagtc ccgcggcgcc cggtcatgct catccgacac caaaggagcg
     1441 ttccagaatg acggggctga tggagggaaa agtcgtggtg gtgaccggtg ccggcggcgg
     1501 cgtcgggcga gagatcgcca tcatgatggc aaaatccggc gctcgcctga tcatcgcgga
     1561 tatcggtgcg tcgctatcag gtgaaggcgg ctcaaccacg cctgcggagc agaccaaggc
     1621 gctgatcaac caacaaggcg ggctggccga gatttgcgcg gaatcggtgg ctgcgtgggg
     1681 gtccgcccga aaaatcgtgc aagcggcact ggatcattac ggccgcatcg acgctgtcgt
     1741 gaataatgcg ggcattttac gagatggaat cttccaccgc atgagtgcgg atgactggct
     1801 gtcggtgatt aacgttcatc tcaacggcag cttcttcgtt tcgcgcgcgg cagcggagca
     1861 ttttcgggtg caggagagtg gtgccctggt gcacatcacc tcgacgtccg gcctggtcgg
     1921 caacatcggt caggccaact acgctgccgc caaactcggg attaccgcac tgtcgaaatc
     1981 gattgcgctc gacatggcgc gctacaatgt ccgttccaat tgcctctcgc cttgggcctg
     2041 gagccggatg acgagctcga taccgaccaa cacgccggaa caggcagccg ccgtggagaa
     2101 gctgaaacaa ttgacgccgg acaagaacgc gccgctggcg gtgtttctgt gctcggatgc
     2161 ggcgaagggc gtgacgggtc aggtgtttgg taccagaatg cacgagattt atctgttcag
     2221 ctcgccgcgt cccgttcgca tcgttcaccg agccgagggg tggacaccgg agtcaatcgc
     2281 cgcgatcgcc gccccggcgc tggcgaacgg gttcatgccg ctggatacct cggagacact
     2341 gttcaattgg gatccggtct gaacaggcta ggataggctt gccgtcactg ccggcaatcc
     2401 ctcgaactcc accgttatgc gggctggcgc gtccagccat acgggtggcg taacggaacc
     2461 cagcatgacg cattggccga cccgcagccc gccgaatgca gccgcgaccg aggaacctgc
     2521 cagccacgcc aggcaggtca acggatgtcc catcagatcg gttgtgatgc cggcgtcgcg
     2581 ttcgatgcca tcgatcagga ttcggccacg tagagctccg gtctccaacg cacgccagtc
     2641 ggcacccctt gaagaaccga gtacggcagc gacatgatag acctgatcgg caatcagcgt
     2701 gggcgtgcct aacgttctca gatcgtcata gcggttctcg acgatttcga tgccggcgac
     2761 gaattcgccg acggcggcgg cgacttcttc actggtgtag gaacccggcg gcaggtcgcg
     2821 agccagtcgc atcgcgacct cgcactcgac accgggtttg atgcaatcgg caaaccgaac
     2881 cgcgccgtcg tcgcgaaaca catttccgga ttccatgaaa ccggcggcag gcccggtcag
     2941 gccaagatac tcctgcatcc gtttaccagt tgcaccgatt ttgaagccgg caggaggagt
     3001 cgcaccaaca agccgtgcca acgccagttg ggccgccgca ccctcggctt ccgtacgcgg
     3061 cgtgacggcg tccgaaagcg gcagcacaag ccgccgttcc aggcgtgccc gccgtagcgc
     3121 cgcagcggca ggtcccggat cataactcat gttgccctgg tcaactcgta cagcgccaca
     3181 gcagcggcgg aggaaacgtt gaggctttcg accacaccct tgatggaaag tccggcgatt
     3241 tcgtcacagg tttcacgggt caaacggcgc aacccgtcgc cctccgcacc cagcaccaga
     3301 gccacgcgac ggcctgcgaa gaacggaccc gacagc
//
LOCUS       DATAVD010000866         2393 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2504641, whole genome shotgun sequence.
ACCESSION   DATAVD010000866 DATAVD010000000
VERSION     DATAVD010000866.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2393
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2504641"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..582)
                     /locus_tag="VHX39_16610"
     CDS             complement(<1..582)
                     /locus_tag="VHX39_16610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019091123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEX3992794.1"
                     /translation="MADAPPGPGPIRITPSREQVGQRIDRLLAEVIGTISRSRVKALI
                     EEGALSRIDHAAVPRTNESLSAEFPDLAGLPAGDGGHLRIAVTEPAEPARAGSAYILT
                     LPEPAPAAPLPQAIPFPILYEDRDLIVLDKPAGLVVHPAPGNRDGTLVNALLAHCGPG
                     FTGIGAEKRPGIVHRLDKDTSGVMVVAKTQLAND"
     gene            640..924
                     /locus_tag="VHX39_16615"
     CDS             640..924
                     /locus_tag="VHX39_16615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992795.1"
                     /translation="MQALKIVTIVMGVLIVLGTTVVVVTVVRRTMFGPAGFPEKAFAA
                     TLDEPAGTGILGVTSVRDRLAVQLHGGGADRVVLIDPVSGVVVGRISLAR"
     gene            1032..1766
                     /locus_tag="VHX39_16620"
     CDS             1032..1766
                     /locus_tag="VHX39_16620"
                     /EC_number="3.6.1.26"
                     /inference="COORDINATES: protein motif:HMM:NF003986.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol diphosphatase"
                     /protein_id="HEX3992796.1"
                     /translation="MKFLCVIPWLLIGNAQAADPSTLWNIDNGKCVPHMRESNDPAPC
                     SIVDLAAGYVVLKDIVGATQFLLMPTVRIGGIESPEVLAPNAPNYWDLAWRARYLTDQ
                     RAGRLLPREALSLAINSPYGRTQDQLHIHIDCVRRDVRDALDAHRDAIRPAWDTFPAP
                     LVGQTWRALRVDGYALGASNPFHLLAEKIPNAAANMANHTLVVVGMTWSGDTAGFAIL
                     DGKVDLLAGNRGSGEILQDHECALAH"
     gene            complement(1931..2392)
                     /locus_tag="VHX39_16625"
     CDS             complement(1931..2392)
                     /locus_tag="VHX39_16625"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX3992797.1"
                     /translation="MYMDIKQGRVVIEMFPDLAPLHVERIKLLARRKFYDGTPFHRVI
                     EGFMAQGGDPTGTGTGGSDLPDLKAEFTTKRHFLRGTCGMARTSNPDSANSQFYIMFA
                     PSPHLDGQYTIWGQVVQGMDFIDQIKRGSGGSGSVTDPDRIIHFQVAADVK"
BASE COUNT          446 a          745 c          748 g          454 t
ORIGIN      
        1 atcattggcc aactgagtct tggccacgac catgacgccc gaggtatcct tgtccaaccg
       61 gtgcacgatt ccaggccgtt tctcagcccc aatgccggta aaccctgggc cgcaatgggc
      121 cagcaatgcg ttcaccaggg tcccgtcgcg gttccccggc gccggatgca cgaccagccc
      181 tgccggttta tccagcacga tgaggtcacg atcctcatac agaatcggaa acggaatcgc
      241 ctgcggcagc ggcgcggcgg gagccggttc ggggagcgtc aggatatagg cgctgccggc
      301 gcgagcgggc tcggcaggct cggtgaccgc aatccgaaga tgcccgccgt cgcctgccgg
      361 caaccccgca aggtcgggaa attccgccga caggctctca tttgttcggg gtaccgccgc
      421 gtgatctatc cgcgacaatg cgccttcctc tatgagtgcc ttgacgcggg agcgggagat
      481 cgtgccgatc acctcggcca gcaatcgatc gatgcgttgg cccacctgct cgcgcgaagg
      541 ggtaatgcgg atcggtccgg gtcctggtgg cgcgtctgcc atgaccgcac gcataaacct
      601 gggccgttcg gccggaaagg atggaccatg ggcgggggaa tgcaagcgct caagatcgtc
      661 accatcgtga tgggcgtgct gatcgtactc ggtacgaccg tggttgtcgt gacggtcgtg
      721 cgacgcacga tgtttggacc ggccgggttt ccggagaagg cgttcgcagc aacgctcgat
      781 gagccggccg ggaccggtat ccttggggtc acttcggttc gcgacagact ggcagtacag
      841 ctgcatggcg ggggcgcgga tcgggtcgtg ctgatcgatc cggtctccgg cgtcgtggta
      901 ggccggatct cactggcgcg ttagtctttc tgactatcgg tcccggcctc gcggccttga
      961 tattcaccga acggcgcaac ggaagggtaa acccgaggac gcccacaaca cacgcgcgga
     1021 ggagcaccaa catgaagttc ctgtgtgtca ttccctggct tctgatcggg aacgcccagg
     1081 cggccgatcc gtcgacgctt tggaatattg ataacgggaa gtgcgtgccg catatgcggg
     1141 aaagtaacga tcccgcgcca tgctcgatcg ttgacctcgc cgccggatat gtggtcctga
     1201 aagatatcgt cggcgccacg cagttcctgc tgatgccaac tgtgcggatc ggcggcatcg
     1261 aaagccccga ggtgctggct ccgaatgcgc caaactactg ggacctggcc tggcgcgcca
     1321 ggtatctgac tgatcagcgc gccggcaggc tgttgccgcg cgaagctctt tcgctggcga
     1381 tcaactcacc gtacggcaga acacaggacc aactgcacat ccatatcgac tgtgtgcggc
     1441 gcgatgtgcg agacgcgttg gacgctcatc gcgacgccat caggcctgcc tgggacacct
     1501 ttccggcgcc tttggtaggg cagacctggc gtgcgctccg agttgacgga tacgctctcg
     1561 gggcatccaa cccgttccac ctgcttgccg aaaaaatccc gaacgcggcg gccaatatgg
     1621 cgaaccatac cctggtcgtg gtgggaatga cctggtcggg agacacggcc ggctttgcca
     1681 ttttggacgg caaggtcgat ctgctcgccg gcaaccgcgg ttccggcgag attctgcagg
     1741 atcatgagtg cgcattggcg cactgacgtc ccgcgccgtc gcccttttgc tatcgcgtaa
     1801 accgccggga acaacgcgtc ctgctggacc aatcatcgcc ccagaggccg cagcctctgc
     1861 aacccacgat gatgtgtctg tgcgagcgac cgcgactcag tgtcgcgtct gcccacccag
     1921 catgaggttt ctatttaacg tcggcggcga cctggaagtg aatgatccgg tctggatcgg
     1981 tcaccgaacc actgccgcca ctaccgcgct tgatctgatc gataaaatcc atgccctgca
     2041 cgacctggcc ccagatcgta tactggccat cgaggtgcgg cgacggcgca aacatgatgt
     2101 agaactggct gttggcactg tccggattgc tggtgcgagc cataccgcag gtgccacgca
     2161 agaagtgccg cttcgtcgtg aactccgcct tgaggtctgg aaggtcgcta ccgcccgtgc
     2221 cggttccggt cggatcgcca ccctgggcca tgaaaccctc gataacccga tgaaacggcg
     2281 tgccgtcata gaacttccgg cgcgcgagca gcttaatccg ctcgacatgt aacggtgcga
     2341 ggtcagggaa catctcgatg acaacccgcc cctgtttgat gtccatgtaa atc
//
LOCUS       DATAVD010000867         1863 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2875435, whole genome shotgun sequence.
ACCESSION   DATAVD010000867 DATAVD010000000
VERSION     DATAVD010000867.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1863
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2875435"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1010
                     /locus_tag="VHX39_16630"
     CDS             <1..1010
                     /locus_tag="VHX39_16630"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3992798.1"
                     /translation="GDAARAATEALGTVQAVAGAAEQLSGSIRAINAQVEQVTNAVSR
                     AVSAGGETRATMVELNEKVARIGSVADIISDIAARTNLLALNATIEAARAGDAGRGFA
                     VVAGEVKALATQTARSTEEIARHIAEVRTASGTSVSSVQHIEATISEVENIANAMAAA
                     LEQQGTATVEIARNVAETADAVRAMNGRVAEVSEEAMLTSGRASEVRDTATALNDSIG
                     TLKRAVTHIVRTSTADMERRKSPRFKVDLACRLIAAAGEFRGTVNDISAGGAHVSGIP
                     AIPAGGGGTLRVDGIDSPLDFTVRGSDGARGMHLAFDLDAGAQDELQRRIETLSMGRA
                     A"
     gene            complement(1033..>1863)
                     /locus_tag="VHX39_16635"
     CDS             complement(1033..>1863)
                     /locus_tag="VHX39_16635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyalkane--coenzyme M transferase"
                     /protein_id="HEX3992799.1"
                     /translation="RGMMPAANGPVTYIDPASVEAECDEFQTTLNEIGAPGFLEPFMT
                     APSPGIIAAAMRNEHYDTDAAYLAALGRALQIEYEAIVRHGFVLQIDAPDLALERHIT
                     YQDQPVSAFLDFAERVVATINDALVNIPRDRVRIHACWGNYEGPHDCDVDMAKILPAI
                     SQARVGGWVLPIANPRHQHEYRCLKDLPLDDGQVVVAGVIDPLTNFVEHPEVVADRLE
                     NVARVIGDPTRLLAGTDCGFDTSAGRGRVPEDVVWAKLKAMADGARIASRRLGMAADS
                     "
BASE COUNT          342 a          562 c          648 g          311 t
ORIGIN      
        1 gcggggatgc cgcccgagcc gcgacggagg cgcttggcac ggtgcaggcg gtcgccggcg
       61 cggccgagca actgagcggg tcgatccgcg cgatcaacgc ccaggtggaa caggtgacga
      121 acgcagtgag ccgggcggtg agcgccgggg gtgagacccg cgccacgatg gtggaactga
      181 acgagaaagt ggccaggatc ggttcggtcg ccgacatcat cagcgacatt gcggcacgca
      241 ccaatctgct cgcgttgaac gccaccatcg aggcggcacg ggctggcgac gcgggaagag
      301 gcttcgccgt cgtggctggt gaggtgaagg ctctggcgac gcagaccgct cgctccaccg
      361 aggagatcgc ccggcatatt gccgaggtgc gcaccgccag cggcacgtcg gtttcctctg
      421 tgcagcacat cgaggcgacg atctcggaag tcgagaatat tgcaaacgcc atggccgcgg
      481 cactggagca gcaggggacg gcgacggtgg agatcgctcg caatgtcgcg gaaacggcgg
      541 atgccgtcag ggcgatgaac gggcgcgtgg cggaggtctc ggaagaggcg atgctgacct
      601 ccgggcgtgc gagtgaggtg cgcgatacgg ccaccgcgct gaacgattcg attggcacac
      661 tgaagcgtgc ggtgactcac atcgtgcgga cgtcgacagc ggatatggag cggcggaagt
      721 cgcctcgttt caaggtggac cttgcctgca ggctgatcgc ggcggcgggc gagttccgcg
      781 gcacggtcaa tgacatttcc gccgggggag cccatgtctc gggcatcccg gcgataccgg
      841 ccgggggtgg agggacgcta cgggtcgacg gaatcgacag cccgctggac tttacggtcc
      901 gcggatcgga cggggcaagg ggcatgcatc tggcgttcga tttggatgcc ggcgctcagg
      961 atgagttgca gcggcggatc gagacgttgt cgatggggcg cgccgcgtag accggcgaca
     1021 tcgttgccgt gattatgagt cggctgccat ccccagccgc cgcgatgcga tccgcgcgcc
     1081 gtccgccatc gctttcagct tggcccagac cacgtcttcc ggaacccgcc ctcggcccgc
     1141 tgacgtgtcg aagccgcaat cggtacccgc caacaaccgg gtcgggtcgc cgatgacccg
     1201 agccacgttt tccagccggt cggccacgac ttccggatgc tcgacgaaat tggtcagcgg
     1261 atcgatgacg ccggcgacca ccacctgacc atcgtcgagc ggcagatcct tcaggcaccg
     1321 atactcatgc tgatgccgcg ggttggcgat cggtaaaacc cagccgccga cgcgggcctg
     1381 actgatcgcc ggcagaattt tggccatatc gacatcgcaa tcatgtggtc cctcgtagtt
     1441 gccccagcag gcgtggatgc gcaccctatc tcgcgggatg ttgaccagag cgtcgtttat
     1501 cgttgccacc acgcgttcgg caaagtcgag gaacgctgaa acgggttgat cctgatacgt
     1561 aatgtgccgc tccagtgcca ggtccggcgc gtcgatctgc aaaacgaaac cgtggcgaac
     1621 gattgcctcg tattcgatct gtaaggcgcg tcccagagcc gccagatacg ccgcatcagt
     1681 atcgtaatgt tcattgcgca tcgcggcggc gatgatgccg ggggagggcg cggtcatgaa
     1741 cggctcaagg aaccccggtg cgccgatttc attgagcgtc gtctgaaatt catcgcattc
     1801 cgcctcgacc gaagcgggat cgatgtaggt gaccggaccg ttggcggctg gcatcatgcc
     1861 acg
//
LOCUS       DATAVD010000868         5236 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3244962, whole genome shotgun sequence.
ACCESSION   DATAVD010000868 DATAVD010000000
VERSION     DATAVD010000868.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5236
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3244962"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..191
                     /locus_tag="VHX39_16640"
                     /pseudo
     CDS             1..191
                     /locus_tag="VHX39_16640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007001987.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
     gene            310..1515
                     /gene="glp"
                     /locus_tag="VHX39_16645"
     CDS             310..1515
                     /gene="glp"
                     /locus_tag="VHX39_16645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HEX3992800.1"
                     /translation="MISVDEARERILAGLRPMPTEIVALANAWNRVTAEPVIARLTQP
                     PSDVSAMDGYALRAADGGLHESLKVVGAAPAGHPFDGAVGPGQAVRLFTGSVVPTGAD
                     AILLQEDAERSGDTVVVNETVVAGRHIRRAGQDFAKDDTVIPAGRRITARDVGLAAAA
                     NHPWLNVHRKPRVAILATGDEIAMPGEPIPSGGIVSSNSHALAALVRAAGGEPTVLPV
                     AKDTTEAVAAVADQVVGFDLLVTTGGASVGDHDLVISGLQTRGLVLDFWQIAMRPGKP
                     LLFGRLGAVPVLGLPGNPVSAMVCSALFLLPGLALMGGLPAGPPPTVAAILGTAVKEN
                     DRRADHLRSTVSTDDLGRVVVTPFSVQDSAMLRRLALADALVLRAPFAPALPAGAEVS
                     VIRLDTLGI"
     gene            complement(1581..2342)
                     /locus_tag="VHX39_16650"
     CDS             complement(1581..2342)
                     /locus_tag="VHX39_16650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3992801.1"
                     /translation="MDLGLAGMKALVTGGTKGIGRAVAEHFATEGADVAICARNPAEV
                     AEAVTALTSRGIKATGRALDVADGPALTAWVQDAAGEFGGLDIVVSNVSALAIGQDEA
                     SWQAEFSTDMMGTVRAVNAAMPFLEQSKSASIVVISSVSGREVDFAAGPYGVFKAALV
                     HYAKGLSFQLAGRNIRVNALSPGNTYFPGGVWEKIEQGNPALFGQAMALNPTGRMGRP
                     EEIARAVVFLASPAASFITGTNLVVDGALTRGVQF"
     gene            complement(2366..3370)
                     /locus_tag="VHX39_16655"
     CDS             complement(2366..3370)
                     /locus_tag="VHX39_16655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEX3992802.1"
                     /translation="MARSTKAQWTDQSIAARRGVGWAKKPVLHDLTEAIQGKFHYTIG
                     PYSDPVLTVSPGDRIRIETRDAFEGAIRTERDKPTKRLRMPFVNPQNGPIMIEGAEPG
                     DALAVQIESMLPRGENPCGTCCMIPYFGALTGTTLTATLNPPLPELTRKIHVDEKHVR
                     WSTRVTLPYSPHIGTLSTSPEIDSINSLTPDSHGGNMDLPDMGPGSITYLPVRTAGAR
                     LFIGDAHACQGDGEVCGTAVEYPSTTTIRVDVIKGWTLEWPRLEREDFIMTIGSARPL
                     EDATRIAYRELVLWMEAEYGFDRWDAYMMLSQCGRVRLGNFVDPKYTVGAGILKTYLA
                     "
     gene            complement(3472..4506)
                     /locus_tag="VHX39_16660"
     CDS             complement(3472..4506)
                     /locus_tag="VHX39_16660"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3992803.1"
                     /translation="MDIQALTFPHAAPPAPGEVTRIAQGVLWFRLKLPFQLNHVNIYL
                     IEDDDGWLVLDTGLATDDCRVGWDSILSGPLQGERLSRMLVTHFHPDHVGLAGWLAQS
                     FGLPLAMPRTEYLYHLMAAHGRGDMYDAAHREFYHSNGLSPEMTDMILGRGLNYLRLT
                     TGVPSSYERIKHGDTRHVGGRDFEVLTGGGHALEQAMLYQPADRLFFAADQVIARISP
                     NVSVHPVEPDEDPLGIYLRDLRALRATLPHDVLVLPGHGLPFHGLHARIDELTDHHAA
                     RCERVADACRAQPLTAAELIPALFVRLLDPHQTGFAFGEVLAHVNYMLGRAELMRETG
                     NDGIRRYRAT"
     gene            complement(4522..>5236)
                     /locus_tag="VHX39_16665"
     CDS             complement(4522..>5236)
                     /locus_tag="VHX39_16665"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3992804.1"
                     /translation="FSLNFGNLEQTTGGNVTLAKDKRLAAFMADVSNLDADHKPLARD
                     DRRRMFNLGNRLWHSDSSFRAIPAKYSILSGRITVDQGGRTEFADMRAAYDALDAATK
                     AEIEDLVCEHSLLYSRGTLGFTDLSDAERAMFRPVRQRLVRIHPVTGRKSLYLSSHIG
                     TIIGWPVPEARAFIRDLTEHATQPQFLYKHVWQQYDLVMWDNRSTMHRVTRFDETRVR
                     DMRRTTVAGDCVTVEQLAA"
BASE COUNT          945 a         1570 c         1681 g         1040 t
ORIGIN      
        1 gccatcgaca ttgccgccac ggttcgcacc accggtcaga ccggcgttga gatggaagcc
       61 ttgactgccg ccagcgtcgc tgccctgacg gtctatgaca tgtgcaaatc ggttgatcgg
      121 gcatgcggat cgaaggtctg cgcgtcgtgc ataaggctgg cggcaagtcg ggcgaatttt
      181 cgcaggcttg aatcgcggtt tgcgccgctt tgactgtgca cgggtcgatc cggtgaccga
      241 atgccgcatc ggcgatacac tgagccaata gcatttgccc aagagaagtc tcccatgccc
      301 gaacctgcca tgatctctgt tgacgaggct cgcgagcgca tcctggccgg cctgcgtccg
      361 atgccaacag aaatcgtggc gctcgccaac gcgtggaacc gggtgaccgc cgagccggtg
      421 attgctcgcc tgacccaacc accgtctgac gtgtctgcca tggacggcta tgcgttacgc
      481 gcggcggatg gtggattgca cgaatcactg aaggtcgtcg gcgctgcgcc ggccggtcat
      541 ccgttcgacg gcgctgtggg gccgggtcag gcggtccgcc tgtttactgg ttcggtggtt
      601 ccaacaggtg ccgacgcgat cctgctgcag gaggacgccg agcggtccgg cgataccgtt
      661 gtggtaaatg aaactgtcgt tgccggacgc cacatccgtc gcgccgggca ggattttgcc
      721 aaagatgaca cggtgatccc tgccggacgg cgtattaccg cgcgcgacgt gggtctcgcc
      781 gctgctgcca accatccgtg gctcaatgtt catcgtaagc ccagggtggc gattttggcg
      841 acgggggatg agatcgcgat gccaggggag ccgatcccgt cgggagggat tgtcagctcc
      901 aattcccacg ccttggcagc gttggtccgg gccgctgggg gagagcctac ggtgttgccg
      961 gtggcaaagg ataccactga ggcggttgca gccgtggcgg atcaggtcgt cgggttcgat
     1021 ttgctggtca ccacgggcgg cgcctcggtg ggtgaccacg acctggtgat ctccggactg
     1081 caaacccgag gcctggtgtt ggatttttgg caaattgcga tgcggccggg gaagccgttg
     1141 ttgttcggcc ggttgggtgc ggtgcctgtc ctgggtttgc ccggaaatcc tgtatccgca
     1201 atggtttgtt cggcgttgtt tctgctgcct gggctggcgt tgatgggggg gttaccggcc
     1261 ggtccgccgc ccaccgttgc agcgatcctc ggtaccgcgg tgaaggagaa cgaccggcgg
     1321 gcagatcacc tgcgctcgac ggtatcaacc gacgacctgg gccgcgtggt cgtgacacct
     1381 ttctcggtgc aggattcggc gatgttacgg cgcttggcgt tggccgatgc gctcgtgttg
     1441 cgcgcgcctt tcgcacccgc gctgcccgcc ggcgccgaag tgtccgtcat ccgcctcgac
     1501 accctgggca tctgacacca tggatgcggg tctggggcct caaggccccc gcgggtccag
     1561 ggcagagcca tggccttccc tcaaaactgt acccccctgg tcaacgcgcc atccacaacc
     1621 aaattcgtcc cagtaataaa actcgccgcc ggactggcca ggaacacgac cgctcgggca
     1681 atttcctccg gtcggcccat ccgcccggtc ggattcaaag ccatggcctg gccgaacagt
     1741 gccggattgc cctgctcgat cttttcccag acccccccag ggaagtaggt gttccccgga
     1801 gacagtgcgt tgacccggat gttgcgtcca gcaagttgga acgacagtcc tttggcgtaa
     1861 tgcaccagtg ctgccttgaa cacaccatat ggaccagcag cgaaatccac ctcgcgcccg
     1921 gaaaccgagg agatcacgac gatcgaggcg gattttgact gctcaagaaa cggcatggcc
     1981 gcgttgactg cgcgtaccgt gcccatcatg tcggtggaga attcggcctg ccacgacgcc
     2041 tcatcctggc cgatcgccaa cgcagaaacg ttggatacga cgatgtcgag gccgccgaat
     2101 tcacctgcag cgtcctgcac ccaggcggtc aacgccggtc catccgcgac gtccagtgcg
     2161 cgcccggttg cttttatgcc acgggatgtc agggcggtga ctgcctccgc cacttcggct
     2221 ggattgcgag cgcaaatcgc gacatccgca ccttccgtag caaaatgttc agcgaccgcg
     2281 cgcccaattc ctttggtgcc accagtgacc aacgctttca tgccggcgag gccgagatcc
     2341 attgctgctg cctccagatt gctggttacg ccaggtacgt cttcaggatg ccggccccga
     2401 ccgtatattt tggatcgaca aaattgccga gccggacgcg cccgcactgg ctaagcatca
     2461 tgtaagcgtc ccaccgatcg aaaccgtact ccgcttccat ccacagcacg agttcccgat
     2521 aagcgatgcg ggtggcgtct tccaacgggc gcgcgctgcc gatcgtcata atgaaatcct
     2581 cgcgctccag gcgtggccat tccagggtcc aacccttgat cacgtcgaca cggatggtgg
     2641 tggttgaggg atattcgacg gccgtgccgc aaacctcgcc gtcgccctgg caggcgtgcg
     2701 catcgccgat gaacaggcgg gctccagcag tgcgcaccgg gagataggtg atgctgccag
     2761 gtcccatgtc cggtagatcc atgttcccgc catgcgagtc cggtgttagc gagttgatgg
     2821 aatcgatctc cggcgaggtg ctgagcgtgc cgatgtgggg gctatacggc agcgtgactc
     2881 gcgtgctcca gcgcacgtgc ttttcgtcga cgtgaatttt tcgggttagt tccggcaacg
     2941 gcggattgag tgtggcggta agcgtggtgc cggtgagggc tccgaaatat gggatcatgc
     3001 agcaggtgcc gcaggggttc tcgccgcgtg ggagcatgct ttcgatctgc acggcgagag
     3061 catccccggg ctctgcaccc tcgatcataa tcggaccgtt ttgtggattg acgaacggca
     3121 tgcgcaaccg tttggtcggc ttgtcgcgtt cggtgcgaat ggcgccctcg aaggcgtcgc
     3181 gggtttcgat gcgaatgcgg tctccgggtg aaacggtcag caccggatcg gaataaggac
     3241 cgatcgtgta atggaatttt ccctgtatcg cttcggtcag gtcatggaga accggctttt
     3301 ttgcccaacc cactccacga cgtgcggcga tcgattggtc ggtccattgc gcttttgtcg
     3361 aacgcgccat ccgcgcatgc ccccgctgtt ggtgtgagat gacgggacgt tgccactttt
     3421 gcggtggagt gtcgcccagt acgtggcaga gcaccagtgg gatttgccgc gtcaggttgc
     3481 ccggtaacgg cggatcccat cattgccggt ctcgcgcatc agttcggcgc ggcccagcat
     3541 gtagttgacg tgcgcgagca cctcgccaaa tgcgaagccg gtctggtgcg ggtcgagcag
     3601 gcggacgaac agggcaggga tcagttcggc ggccgtcagt ggttgagcgc ggcacgcatc
     3661 cgcgacccgc tcacagcgtg ccgcgtgatg gtcggtcagt tcgtcgatgc gcgcgtgcag
     3721 gccgtggaac ggcagtccgt ggccgggcag caccaggaca tcatgcggca gggttgcgcg
     3781 caacgcccga aggtcgcgca ggtagatgcc caaaggatct tcgtcgggtt ccaccggatg
     3841 cacgctgacg ttgggagaga tgcgcgcgat cacctgatcc gccgcaaaga ataaccggtc
     3901 ggcgggctgg tacagcatgg cctgttccag cgcatggcct ccgccggtaa gtacttcgaa
     3961 gtcacgaccg ccaacatgcc gcgtatcgcc gtgtttgatc cgttcgtagc tggatggcac
     4021 gcctgtggtc agccgcagat aattcaatcc gcggccaagg atcatgtcgg tcatttccgg
     4081 cgacaggcca ttgctgtgat aaaattcgcg atgcgcggcg tcatacatgt cgccacgacc
     4141 gtgcgcggcc atcagatgat acagatactc ggtgcgtggc attgccagcg gcagcccgaa
     4201 cgactgtgcg agccaccctg cgagacctac gtgatccggg tgaaaatgcg tcaccagcat
     4261 ccggctgagc cgctcacctt gcaacggacc cgacaggatg ctgtcccatc caacgcggca
     4321 atcatcggtg gcaaggccgg tgtcgagcac cagccagcca tcgtcgtcct caataagata
     4381 gatgttcacg tgattgagtt ggaacggtag tttcaatcga aaccacagca cgccctgcgc
     4441 aatgcgtgta acctcacctg gcgcaggagg tgccgcatga gggaaggtca gagcctgaat
     4501 gtccatggga tctggctgcc gtcaggcggc cagttgctcc acagtgacgc agtcgcccgc
     4561 gactgtggtt cggcgcatgt cgcgcacccg ggtttcatcg aaccgcgtca cgcgatgcat
     4621 ggtcgagcga ttgtcccaca tcaccagatc gtattgctgc cagacatgct tgtagagaaa
     4681 ttgcggttgc gtggcgtgct cggtcaggtc gcggatgaag gcgcgcgctt ccggcacggg
     4741 ccagccgatg atggtgccga tatgcgacga taggtacaac gacttccgcc cagtgacggg
     4801 gtggatacgg accagacgct ggcgaacagg cctgaacatg gcgcgttcgg cgtcggacag
     4861 gtcggtgaaa cccagagtgc cgcgcgagta aagcagcgag tgttcgcaga ccaggtcctc
     4921 gatttcggcc ttggtcgcgg catcgagcgc gtcatatgca gcccgcatgt cggcaaattc
     4981 ggtgcggccg ccctgatcga cagtaatgcg tcctgacagg atggagtact ttgccgggat
     5041 tgcccggaac gaactgtcgg aatgccagag ccgattgcca agattgaaca tccggcgcct
     5101 gtcgtcacga gccaaaggct tatgatcggc gtccagattg gacacgtccg ccatgaacgc
     5161 agcaagcctc ttgtctttcg ccagggtgac gttgccgcct gttgtctgtt caagattgcc
     5221 gaaattcagg ctgaag
//
LOCUS       DATAVD010000869         3119 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1200923, whole genome shotgun sequence.
ACCESSION   DATAVD010000869 DATAVD010000000
VERSION     DATAVD010000869.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3119
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1200923"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..277)
                     /locus_tag="VHX39_16670"
     CDS             complement(<1..277)
                     /locus_tag="VHX39_16670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992805.1"
                     /translation="MRITAVRLFRLTGTMETTGPFWEERLVRPIDIYLHYRIRNDFEG
                     GVQIDPTHYRLEQHFLRIETDDGPHGIAGPLPDMVALYVAKRLRPLLL"
     gene            complement(470..1348)
                     /locus_tag="VHX39_16675"
     CDS             complement(470..1348)
                     /locus_tag="VHX39_16675"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3992806.1"
                     /translation="MDTRGRDHQRSGVIPALPELRFLPIPAASRSHYLGDRFSYMEAG
                     SPAAPPLLLLHGVGANAMHWRFQFAGLSDRFRVIAWNAPGYMLSDNLANEAPEGRDYA
                     DACVDFMDAAGVARCDGLANSFGSRIAQCVAWFHPGRIDRMVLTGTAIGQRDMPREAR
                     AKLIAARQAQVADGGYGFGARAAALVGPDASEQTIALIKYVLRATNPNGFMRAVRFLA
                     SNTYTPDFAARLTMPMLLVQGESDVVTPLESNAAVLAQVLPQAQMKLLPRTGHLPEVE
                     RWEIVNDLVRDFLTFA"
     gene            complement(1309..2103)
                     /locus_tag="VHX39_16680"
     CDS             complement(1309..2103)
                     /locus_tag="VHX39_16680"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEX3992807.1"
                     /translation="MPRRLIDISVSLKAGIKSDPPHMLPQIEYLDHHQTAPAMAEYMG
                     IRVDQLPDGEYAAVEKVQISTHNGTHLDAPYHFFSTMNHALKPGGEPSWRIDEVPLEW
                     CFQPGVKLDFRHMAAGYVVTPGDVEAELKRIGHTLRPLEIVLVNTAAGARYGMDDFVD
                     SGCGMGKAATMWLLERGVRLTGIDGWSWDAPFSLTRERVRQTGDAGLIWEGHRAGREI
                     GYSHLEKLHNLEALPADGFEVVCFPVKVHRGSAGWTRAVAIINDPA"
     gene            2292..2972
                     /locus_tag="VHX39_16685"
     CDS             2292..2972
                     /locus_tag="VHX39_16685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992808.1"
                     /translation="MNYLLAGSQIKLTYLQDRRALREIDWPAIFDDLTDAGLALSQWQ
                     WCDLDALTHVVLAVDRTTDRHAGVLGLTERTDPVDSWLMIEQLVVRPKASDVMLPRAM
                     LAHVLARAVCLDGKPLAMVAAASGRGPLSELSRNIRFATLYPPEQGNVIALRAAGLAR
                     QIGIGRSVLDLQAVTEGSLLRDLRGLHGIRAMGKKAALSELSMAKQARNAAATRRPRK
                     ATHTGRTG"
BASE COUNT          603 a          980 c          945 g          591 t
ORIGIN      
        1 ggagcagcag cgggcgcagc cgttttgcga cgtatagcgc caccatgtcg ggcagcgggc
       61 cggcgatgcc atgcgggccg tcgtcagttt cgatccgcag gaaatgttgt tcgagtcggt
      121 aatgcgtcgg atcgatctgc acgccgcctt cgaagtcgtt acggatgcgg tagtgtaggt
      181 agatgtcgat cggacgaacc aggcgttcct cccagaacgg gcccgttgtt tccatcgttc
      241 cggtcaatcg aaacaggcgg acggcggtga tgcgcattgg ctttggctct cccgaatggt
      301 ttggaacgga caaagcctgg gtagaggggg atggcaaggg gcctgcaaac gacccactct
      361 ttgatgacct tgaatgtcag ccgatggccg gattgacacg tgatatgcgc agaatggatg
      421 atatttcggc agatccattt gtcgttcgcc atgtcctgga ttactccggt catgcgaatg
      481 tcaaaaaatc ccgcacgagg tcattgacga tttcccaccg ctccacctcc ggcagatgac
      541 cggttcgcgg caatagtttc atctgtgcct gcggcaggac ttgcgccagc accgcggcgt
      601 tgctttccag cggtgtcaca acatcggact cgccctggac cagcagcatc ggcatcgtca
      661 gccgcgccgc aaagtcgggc gtataggtgt tcgacgccag gaatcgcacg gcgcgcatga
      721 acccattcgg gttggtggca cgcagcacgt attttatcag tgcaatcgtt tgctccgacg
      781 cgtccggccc gaccagagcg gccgctcgcg cgccgaagcc atatccgccg tctgctacct
      841 gagcctgacg ggcggcaatc agtttcgcgc gtgcctcacg cggcatgtcg cgttgaccga
      901 tcgccgtccc ggtcaacacc atccggtcaa tccgtcccgg atgaaaccac gccacgcatt
      961 gagcgatacg ggacccgaac gaattcgcca gcccgtcgca gcgcgcgaca ccggccgcat
     1021 ccatgaaatc cacgcaggca tccgcgtaat cgcggccctc cggtgcctca ttcgcaagat
     1081 tgtcgctgag catataaccc ggcgcgttcc aggcgatcac acggaaccgg tcgctcaggc
     1141 cagcgaactg aaaccgccag tgcatggcat tggcgccaac gccgtgcagc agcagcaaag
     1201 gtggcgcagc cggcgaaccc gcctccatgt agctgaaccg gtcgcccaga taatgcgaac
     1261 gagacgccgc agggattggc agaaagcgca gctcaggtaa cgcggggatc acgccggatc
     1321 gttgatgatc gcgaccgcgc gtgtccatcc cgccgagccg cggtgcactt tcaccgggaa
     1381 gcacacgacc tcaaaaccat ctgccggcaa cgcctccaga ttgtgcagct tttccagatg
     1441 cgaatagccg atttcccggc cggcgcggtg gccctcccag atcaaaccgg cgtcaccggt
     1501 ttgccgcacc cgctcccggg tcagtgagaa cggcgcgtcc cagctccagc catcgatgcc
     1561 ggtcagccgg acgcctcgct ccagcagcca catggtggcg gccttcccca tgccgcagcc
     1621 ggaatcgacg aaatcgtcca tgccgtaacg ggcacccgca gccgtgttaa ccagcacgat
     1681 ctccagcgga cgcagcgtgt gaccgatgcg cttcagctcc gcctccacat cgcccggcgt
     1741 tacgacatag ccggctgcca tgtgccggaa atccagtttc acgcccggtt gaaaacacca
     1801 ttccagcggc acctcgtcga tccgccagga cggctcgccg cccggcttga gggcatggtt
     1861 catcgtcgag aaaaagtgat acggcgcgtc gaggtgcgtg ccgttatgcg tgctgatttg
     1921 caccttttcc accgcggcgt actcgccgtc gggcaactga tcgacccgga tgcccatata
     1981 ctccgccatt gccggcgcgg tctggtggtg atccagatac tcgatttgcg gcaacatatg
     2041 cggtggatcg cttttgattc ccgctttcag ggaaaccgag atgtcgatca ggcgacgtgg
     2101 catggagatt tctccgataa tgcggcaacc acgatagacc acgtcgaaag tggctgtcac
     2161 gccagccacc ggatcacgca aaattcgctc atattttctg attgtgtgat gtagttcaca
     2221 cgcggttttc ccgctgccat gccaggcttc cttcccaaag ccttggtgaa actgggcagg
     2281 gggttcggga catgaactat ttacttgcgg ggtcgcaaat aaaactgact tatttgcaag
     2341 atcgacgggc acttcgtgaa atcgactggc cggcaatttt cgatgatctc acggacgccg
     2401 gcctggcgtt gagccaatgg caatggtgcg atctggacgc tctgactcac gtcgtgctcg
     2461 ccgtcgatcg gaccaccgac cgccatgccg gagtgctcgg tttgactgag cggacggacc
     2521 cggtcgactc gtggctgatg atcgaacagc tggtggtgcg gccgaaagcc agcgacgtta
     2581 tgctgccgcg ggcaatgctg gctcatgttc tcgcacgcgc cgtgtgcctg gatgggaaac
     2641 cactcgccat ggtcgccgca gcgtccggac gcggcccgtt gagcgagttg agtcggaaca
     2701 tccgcttcgc cacgctgtat ccaccggaac agggcaacgt catcgcattg cgggccgcag
     2761 gtctggcacg ccagatcggc atcggccgct cggtgctgga tcttcaggcg gtgaccgagg
     2821 gctcgctgct gcgcgatctg cgcggtctgc atggcatacg ggcgatggga aagaaggcgg
     2881 ctttgtcgga gttgtctatg gcgaaacagg ccaggaacgc cgccgccacg cgccgtccca
     2941 gaaaagccac tcatactggc aggaccggat aaacgccctc gccatgcggt cgcgaaccgt
     3001 ctctctgccg gcggcttcag cctggtcggt ggtggcaatg acggcacgca ccgcctcacc
     3061 gaacccgtcg tcggcatagg tatcgatcca ggcgcgataa ggattgtccg gcgcagcgg
//
LOCUS       DATAVD010000870         3583 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_642077, whole genome shotgun sequence.
ACCESSION   DATAVD010000870 DATAVD010000000
VERSION     DATAVD010000870.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3583
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_642077"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..451)
                     /locus_tag="VHX39_16690"
     CDS             complement(<1..451)
                     /locus_tag="VHX39_16690"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3992809.1"
                     /translation="MPDTFEEAVKQPEIDVAPADRAKRRGRTLILAACLMATFVTATE
                     STIVATAMPTIVGDLGGFDLFSWVFTIFLLAQAVSIPIYGRLADMFGRKKVFFIGIGL
                     FLTGSILCGFSWAMVPLICFRALQGLGAGAIQPITATILGDIYTPSER"
     gene            595..1833
                     /locus_tag="VHX39_16695"
     CDS             595..1833
                     /locus_tag="VHX39_16695"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3992810.1"
                     /translation="MKFGVFYEHQLPRPWNANSEYELFQNSLTQVELADRLGFDYMWE
                     VEHHFLEEYSHSSAPEVFLAAASQRTKRIRLGHGIVQITTNQPHRVAERVSTLDQISG
                     GRVELGMGEGAGPAELHPFGIRVRDKRDRWEEAVKAIVPMFTEESWEFHGQYYDFPAR
                     NVIPKPFQKPHPPLWVACSNIRTIGEAGQWGMGALGFSFVSPDAARAWVHKYYNMLLD
                     QPQRLTNYQVNPNVAIVNGFMCAPTDDEALEKAAGWTFFIFALSYYGRKGIDAPGKGD
                     LWREYQDWRQSEKAQQALRNGLIGSPDTIRKRLRLFEEAHVDQVILLNQAGKTSHRDI
                     CDSLELFAKEVMPEFHARQPAQEQWKQDVLNRKIVLQDLDTEQYDLYSHQNEDIVRLT
                     PEQLRQRMAEKEKLAAAAGE"
     gene            1852..3189
                     /locus_tag="VHX39_16700"
     CDS             1852..3189
                     /locus_tag="VHX39_16700"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3992811.1"
                     /translation="MRQMVMVGFLQAQNCTNLVSSWRHPESRTDTWSPEYYADLGRVL
                     EDGKFQVAFFDDRLAMPDRYGNDHKHTVENGIRCVKMDPLVVLMVMANATKRLGIGAT
                     RTTTYYEPFDVARAFATIDLMTHGRAAWNVVTSMNDGEALNMGKELHPEHDGRYDQAE
                     EFMEIVMGHWQSWDDDAIVQDKQTGLFAHGDKVRRIDYRGKYFNSRGPFTVPRSEQGH
                     PVVIQAGQSARGKKFAAKWGELLFVGSPPTLEIGRRNYKQIKEAVAANGRNPDHCLIA
                     PSAYIICGESKSEAEDKLALTERLTPDIDALSLLSEAMNFDFASKGIDEPFTDDELDN
                     ISGTQSMRDRVLATSGIKNPTPRDFVKFSSRARPNKPFIGGPKEIADGLEEWFSTGIC
                     DGFVVAATHSPGTYIEFVKYVVPELQRRGLYHKDYKGATLRENLGLPIPRVGG"
     gene            3205..>3583
                     /locus_tag="VHX39_16705"
     CDS             3205..>3583
                     /locus_tag="VHX39_16705"
                     /inference="COORDINATES: protein motif:HMM:NF019590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HEX3992812.1"
                     /translation="MIYEMRTYTFHVGKLPAYLELARNVGRPIRGQNYGTNYGYWTSE
                     FGALNQIWHLWSYDSLDERKRLQGELAKNERWTKEYSANVRPLIARQDIRFLNPVNGV
                     NPPAKEGGFYELRMDRTNPGRAPG"
BASE COUNT          812 a          988 c         1103 g          680 t
ORIGIN      
        1 ctcgttcgga cggcgtgtag atatcgccaa ggatcgtggc ggtgattggc tgtatggcgc
       61 ccgcgccgag accttgaagg gcgcggaaac aaatcaacgg caccatagcc caggagaagc
      121 cgcaaaggat ggagccggtc aggaacaggc cgatgccaat gaagaacact ttcttccggc
      181 cgaacatgtc ggcgaggcgg ccgtaaatcg gaatgctcac cgcttgtgcg agcaggaaga
      241 tggtgaacac ccagctgaac aggtcgaagc cgccgaggtc tccgacaatg gtgggcattg
      301 cagttgcgac aatggtactt tcggtggcgg tcacgaatgt cgccataaga caagccgcaa
      361 gaatcaacgt tcgtccgcgg cgctttgccc ggtcggctgg tgcgacatcg atttctggtt
      421 gtttaacggc ttcctcaaac gtatcaggca tttattggat ccgaagtttg gcgcgtgttc
      481 tgtcattccc atggttggat gacaaccgaa gcgccaggat ggcacccatg cggcgcgctt
      541 gacgctccgg gacggtcctg cgaccgttcg gtctatcagt tggaaggacc ggccatgaaa
      601 ttcggcgttt tttatgagca tcagttgccg cgcccgtgga acgcgaacag cgaatatgaa
      661 ctgttccaga actcgctcac gcaggtcgaa ctcgccgatc gattgggctt tgattatatg
      721 tgggaagtcg agcaccattt ccttgaggaa tactcacatt cctcagcacc cgaggtgttt
      781 ctcgctgccg ccagccaacg cacgaaacga atccggctgg gtcatggcat cgttcagatc
      841 accaccaacc aaccgcatcg ggtggcggaa cgcgtctcca cgctcgatca aatctccggc
      901 ggccgcgttg aactgggcat gggggagggc gccggaccgg cggagctaca tccgttcggc
      961 atccgcgtac gcgacaagcg cgatcgctgg gaagaggcgg tcaaggccat cgttccgatg
     1021 tttaccgagg agagttggga attccacggc cagtactatg acttcccggc acgcaacgtc
     1081 attccgaagc cgtttcagaa gccgcatccg ccgttatggg ttgcctgctc caacattcgc
     1141 accatcggcg aggcgggcca gtggggaatg ggtgcattgg gctttagttt cgtctcgccg
     1201 gatgcagcgc gcgcgtgggt acacaaatac tataacatgc tgttggatca gccacagcga
     1261 ctgaccaact accaggtcaa ccccaatgtc gcgatcgtga acggtttcat gtgcgcaccg
     1321 accgacgacg aggcactgga gaaggccgca ggttggacct tctttatttt tgctctgtcg
     1381 tattatggcc ggaaagggat tgatgcgcct ggcaagggcg atctatggcg agaataccag
     1441 gactggcgcc agtcggaaaa agcccaacaa gcgctgcgta atggattgat cggctcgccc
     1501 gataccattc gcaaacgcct gcgtttattc gaggaagcgc atgtcgatca ggtgattctg
     1561 ctcaatcagg cgggcaagac atcgcaccgg gacatctgcg acagcctcga gttgttcgcg
     1621 aaggaggtca tgccggaatt ccatgctcgc caaccggcgc aggagcaatg gaagcaggac
     1681 gtgctgaacc gcaagatcgt gctgcaggat ctggataccg agcaatacga cttatactcg
     1741 caccagaatg aagacattgt gcgccttacg ccggaacaat tgcgtcagcg tatggcagag
     1801 aaagagaaat tggccgccgc ggccggcgaa tagccgcaca ggagacgttc gatgcgacaa
     1861 atggtgatgg tgggatttct gcaggcgcag aattgcacga atttggtgag ttcatggcga
     1921 catccggaat cgcgtaccga cacgtggagc ccggaatatt acgctgacct cggccgcgtg
     1981 ctggaggacg gcaagttcca ggtagcgttc ttcgacgatc ggctggcgat gccggaccgc
     2041 tatggcaatg accataagca cacggtggag aatgggatcc gttgcgtgaa gatggacccg
     2101 ctggttgtgc ttatggtcat ggccaatgcg accaaacgcc tgggcatcgg cgcgacgcgg
     2161 accacgacct attatgagcc attcgacgtc gcgagggcct tcgccaccat cgatctgatg
     2221 acgcacgggc gggcggcctg gaacgtcgtc acgtcgatga acgacggcga agctctgaac
     2281 atgggcaaag aactgcatcc ggaacatgac ggccgctacg atcaggccga ggagttcatg
     2341 gaaatcgtca tgggccactg gcagtcctgg gacgacgacg cgatcgtgca agataagcaa
     2401 accgggctgt tcgcacacgg cgacaaagtg cgccgcatcg attatcgcgg gaaatatttc
     2461 aactcgcgcg gcccgttcac cgtgcctcgg tcggaacagg gtcacccggt ggtgatccag
     2521 gccggccaga gcgcccgagg caaaaaattc gcggcaaaat ggggggagtt gctgtttgtc
     2581 ggcagcccgc cgacattgga aatcggccgc cggaactata agcagatcaa ggaggctgtc
     2641 gcagccaatg gccgcaatcc agaccattgc ctcattgcac cgtccgctta tatcatttgt
     2701 ggcgagtcga agtcggaggc ggaggacaaa ctggcgctga ccgaacggct gacgcctgat
     2761 atcgacgcgt tgtcattgct gtcggaagcg atgaatttcg actttgcgtc gaaggggatc
     2821 gacgaaccat ttaccgacga tgagctggac aatatttccg gcacgcagtc gatgcgggac
     2881 agggtgctgg cgacctcggg gatcaagaac ccgaccccgc gcgacttcgt caaattcagc
     2941 agccgcgctc gcccgaacaa accgtttatt ggtggtccga aggaaatcgc ggatggactg
     3001 gaggaatggt tctccaccgg tatatgcgac gggttcgtgg tagccgcgac gcattcgcca
     3061 ggcacctata tcgagttcgt caaatacgtc gtgccggaac tgcaacggcg aggactgtac
     3121 cacaaggact acaaaggcgc cacgctgcgt gagaaccttg gcctgccgat cccacgggtt
     3181 ggcggctgaa ctgaggaaac atccatgatc tacgaaatgc ggacttacac attccacgtg
     3241 ggcaaactgc ccgcttacct ggagcttgcc cgtaacgtcg ggcgtccgat ccgcggacag
     3301 aactatggca cgaattacgg ctattggacg tcggagttcg gcgcactgaa ccagatctgg
     3361 catctgtgga gttacgacag tctcgatgaa cgcaagcggc tgcagggcga gcttgcgaag
     3421 aacgagcgtt ggacgaagga atactcagcc aatgtgcggc cgctgatcgc gcgccaggac
     3481 attcgcttcc tcaacccggt gaacggggtc aatccgccgg cgaaagaagg cggcttctac
     3541 gaactgcgca tggaccgcac caaccccggg cgtgccccag ggt
//
LOCUS       DATAVD010000871         5001 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3059264, whole genome shotgun sequence.
ACCESSION   DATAVD010000871 DATAVD010000000
VERSION     DATAVD010000871.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5001
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3059264"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1406)
                     /locus_tag="VHX39_16710"
     CDS             complement(<1..1406)
                     /locus_tag="VHX39_16710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992813.1"
                     /translation="MSQAVALTGSAFVKHGLNAIDLFVRRWSNLALVLFGVAAFLLGL
                     WGWQLDNPVAGFSGWVDDIFRTFQLLTLQFPHDAGSPHWQLNVARFLLPTIALLQSYR
                     IVLSAIRSPARLAMLGLRHGHIILVPGKGAVGRAMLLEVQVHNLRAVAVAPDLMANER
                     ARMEEYRLPVLNADPYLDATWHQTRADRASLVVVSHGSDVDNLNIVVTVADALSSGRR
                     RHGPMLVVTLESDTLAEQVDVALDHAARHSGLRYRRLSVPDEAARMLFLEPPLPACKA
                     DRTQPSHIVIVGLGAGARSVLRNALTLGQDAACSGPIVTIVASEQEMAAEPLLKQDGV
                     PAYVATFRPVPCDIASGVPDAALDTMLDDAPPPVMVCVCLADDAAVAMGIALARQAEL
                     RKWPDFPIAVHQTREDRFLQLLARENTSSGHARLRPFGGLLPAGTLQRLQTESDDILP
                     RAVHEHYLETMRRTDASEG"
     gene            complement(1674..2075)
                     /gene="cyoD"
                     /locus_tag="VHX39_16715"
     CDS             complement(1674..2075)
                     /gene="cyoD"
                     /locus_tag="VHX39_16715"
                     /inference="COORDINATES: protein motif:HMM:TIGR02847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009486 - cytochrome bo3 ubiquinol oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0015990 - electron transport coupled proton
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit IV"
                     /protein_id="HEX3992814.1"
                     /translation="MSDTTPDTGSPGHDATPGEARLDSEETGEGLGSYVIGLGLATLL
                     TIVSFFVARTTLVWQPSIPVALVVLAVAQMGVHLVFFLHITSGPDNVNNIMALAFGVL
                     IVLLILTGSLWIMAHMNHNMMSMGQIMQMQR"
     gene            complement(2072..2710)
                     /locus_tag="VHX39_16720"
     CDS             complement(2072..2710)
                     /locus_tag="VHX39_16720"
                     /inference="COORDINATES: protein motif:HMM:NF012720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome (ubi)quinol oxidase subunit III"
                     /protein_id="HEX3992815.1"
                     /translation="MSAFQAAADGLPEREPALPRATGELVSKRIVVGYGFWIFLLSDI
                     IMFSAFFASYAVLVDNTAGGPSGRDLFHLDNVALETACLLLSSFTCGLATIGARIHNG
                     VWFYGAMTATFVLGAAFLSIEMHEFVSMVALGAGPSRSGFLSGFFTLVGCHGLHVTIG
                     LLWLLTMMAQVFAKGYRPDILRRMLCFGLFWHTLDIIWVALFTVVYLMGAAR"
     gene            complement(2707..4704)
                     /gene="cyoB"
                     /locus_tag="VHX39_16725"
     CDS             complement(2707..4704)
                     /gene="cyoB"
                     /locus_tag="VHX39_16725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004272288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009486 - cytochrome bo3 ubiquinol oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0015990 - electron transport coupled proton
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit I"
                     /protein_id="HEX3992816.1"
                     /translation="MLGKLSWSAIPFDQPIPLVTGAVVLLVIIAVLAWITLKGWMPYL
                     WREWITSVDHKRIGIMYILFAMVMLLRGFADAIMMRSQQAIAFHSEGYLPPEHYDQIF
                     SAHGTLMIFFVAMPFVIGLMNLVMPLQLGIRDVAFPTLNSVSFWLTATGALLVNISLV
                     VGEFARTGWLPFPPLSEITYSPGVGVDYYLWSLQISGVGTLLTGVNFVTTVLKLHAPG
                     MTYMRMPVFCWTTLASSLLIVAAFPVLTATLAMLLLDRYLGFHFFTNEAGGNMMMFMN
                     LIWIWGHPEVYILILPAFGVFSEVVATFSRKPLFGYRSMVLATMAICVLSFMVWLHHF
                     FTMGAGADVNAIFGIASMIIAVPTGVKVFNWLFTMYGGRLVYATPLLWAIGFMITFVI
                     GGMTGVLLAVPPADFVLHNSLFLVAHFHNVIIGGVLFGSFAGYTYWFPKAFGFRLHEG
                     LGKAAFWCWFIGFYVAFGPLYVVGLMGMTRRMQHYDVAEWHPWLLVAAGGAAIIMAGI
                     ILQIAQLAVSIRDREKLRDDTGDPWDGRSLEWSTPSPPPAFNFAVLPRVEGNDAYWIM
                     KQRARRLGGLSEEPVYSDIEMPRNSATGFVCAFFATFMGFALIWHIWWIVAVAAVGAY
                     ATFVVFAWRDRTEYVIPSDEVARIDRVNRTNRARVLERVPS"
     gene            complement(4706..>5001)
                     /locus_tag="VHX39_16730"
     CDS             complement(4706..>5001)
                     /locus_tag="VHX39_16730"
                     /inference="COORDINATES: protein motif:HMM:NF018219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009486 - cytochrome bo3 ubiquinol oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="COX aromatic rich motif-containing protein"
                     /protein_id="HEX3992817.1"
                     /translation="GLASHFSGDGFSDMHFDVRAVPTAQFTAWIAATRSTGPSLDPTS
                     YAALERQSMNTTPFTYRAVDPDLFNAIVTQKLPPGPGPESGTPNVTVSPRTLR"
BASE COUNT         1125 a         1540 c         1532 g          804 t
ORIGIN      
        1 ccctccgaag catcagtccg ccgcattgtt tcgagatagt gttcatgcac cgcccgaggg
       61 agaatgtcgt cactttcggt ctgcaggcgc tgcaatgtgc cggctggcag taatccgccg
      121 aacgggcgca gccttgcatg ccccgaggac gtattttctc gcgccagcag ttgcaggaac
      181 cggtcttcgc gcgtctgatg cacggcgatc gggaagtccg gccactttcg aagttctgcc
      241 tgccgcgcaa gagcgatgcc catggcgacc gccgcgtcgt cggcaagaca gacgcagacc
      301 atcaccggcg gcggggcatc gtccagcatc gtgtccaacg ctgcgtcggg cacgccggat
      361 gcgatatcgc aaggcaccgg ccgaaaggtg gcgacatagg cgggaacacc gtcctgcttc
      421 agcaatggtt cggccgccat ttcctgttcg gaggcgacga tcgttacgat cggcccagag
      481 catgctgcat cctgtccgag ggtcaatgca tttcgcagca cggatcgcgc gcccgcgccg
      541 agtccaacaa tgacgatatg cgatggctgt gttcgatcag ccttgcatgc gggcaatggc
      601 ggctcgagga acagcatgcg cgccgcctcg tcaggaaccg acaaacggcg atagcgcagt
      661 cccgagtggc gtgcggcatg atcgagtgcg acatcgacct gctccgccaa tgtgtcgctt
      721 tcaagtgtca cgaccagcat cgggccatga cgtcgccggc cggaactcag ggcatcggcg
      781 accgttacga caatgttcag gttgtcgacg tcgctgccgt gcgagaccac gacaagactg
      841 gcgcgatcgg ctcgggtctg gtgccaggtt gcgtcgaggt acgggtcagc gttgaggacg
      901 ggcagccggt attcctccat gcgcgccctc tcgtttgcca tcaggtcggg tgcgacggcg
      961 acggcgcgca aattgtgcac ctgcacctca agcagcatgg ctcggccgac tgcgcccttg
     1021 ccgggcacca ggatgatgtg gccatgacga aggcccagca tggcgaggcg ggctggactg
     1081 cgaattgcac tgagaacgat gcggtaggat tgcagcaagg cgatcgtcgg cagcagaaaa
     1141 cgggcaacat tgagctgcca gtgcggtgaa cccgcgtcgt gcgggaattg caacgtcagc
     1201 aattggaacg tgcggaaaat gtcatcgacc cagccggaga agccggcaac gggattgtcg
     1261 agctgccacc cccagagacc caacaggaac gcggcaacgc cgaacaggac aagggcgagg
     1321 ttggaccaac ggcgaacgaa caggtcgatg gcattcagcc catgcttcac gaacgccgat
     1381 ccggtcaagg caaccgcctg agacaatatt tctcccagtc cggatcggcc cgatcgatgc
     1441 cgtgacctac caaccggcgc gactgggcac gccggctttc gggtgagccc gaccaaggcc
     1501 aggcggaagt ctcacgccag caacgatggt gccatgacga gccgcgtcga taggaaacca
     1561 ttgcaatcca agccgatcat gtgggtgccg tgataatcta cagactagcc cactttatcg
     1621 ccgagtgaaa cgttcacgcg ggccgcagta atgatcggct gatcccggca aggtcaacgt
     1681 tgcatttgca tgatctgccc catggacatc atgttgtgat tcatgtgcgc catgatccac
     1741 agcgaacccg tgaggatcag caggacgatc agcacgccaa aggcaagtgc catgatattg
     1801 ttgacattgt ccggtccgct ggtgatgtgc agaaagaaca cgagatgcac gcccatctgc
     1861 gcaacggcga gcacgaccaa cgcgaccgga atgctcggtt gccaaaccag cgtggtgcgc
     1921 gcgacaaaga acgaaacgat ggtgagcagc gtcgcaaggc caagcccgat gacatagctg
     1981 ccaagacctt cgccggtttc ctccgagtcg aggcgcgcct cgcccggcgt ggcgtcgtga
     2041 ccgggcgacc ctgtgtccgg tgtggtgtca ctcatcgcgc agctcccatc aggtagacca
     2101 ccgtgaacaa cgcgacccag atgatatcca acgtatgcca gaacaggccg aagcagagca
     2161 tgcgccgcaa tatgtcgggc cggtaccctt tcgcgaacac ctgcgccatc atggtcagca
     2221 gccacagcaa tccgatcgtc acatgcaggc cgtggcagcc gaccagcgtg aagaatcccg
     2281 agagaaaccc gcttcgcgat ggacccgctc cgagcgccac catggacacg aactcgtgca
     2341 tttcgatgga cagaaacgcg gccccgagca cgaaggtcgc ggtcatcgcg ccgtaaaacc
     2401 aaaccccgtt gtgaatccgg gcgccgatgg ttgcgaggcc gcaggtgaag ctggaaagca
     2461 gcaggcacgc ggtttccagg gcaacgttgt cgagatggaa caggtcgcgg ccgctcggcc
     2521 cgcccgccgt gttgtccacc agtaccgcgt agctcgcgaa gaaggcggag aacataatga
     2581 tgtcgctcag caggaaaatc caaaacccgt agccgacgac gatgcgtttg gataccagtt
     2641 cgccggtcgc gcgcggcagc gccggttcac gttcgggcag tccatcggca gcggcctgaa
     2701 acgcactcat gacggcaccc gctcgagcac cctggcgcga ttggttcggt tgacccggtc
     2761 aatgcgcgcg acctcgtcgg acggaatgac atactcggtc cggtcgcgcc acgcgaacac
     2821 cacgaacgtc gcataggcgc ccactgcggc caccgcgacg atccaccaaa tgtgccagat
     2881 cagcgcaaag cccatgaatg tcgcaaagaa cgcgcagaca aacccggtcg cgctgtttct
     2941 gggcatttcg atgtcagagt agactggctc ttcgctcagc ccgcccaacc ggcgcgcgcg
     3001 ttgtttcatg atccagtaag cgtcgttgcc ctcgacgcgc ggcagcacgg cgaagttgaa
     3061 agccggcggc ggcgatggcg tcgaccattc gagcgaacgt ccgtcccagg gatcgccggt
     3121 gtcgtcgcgc aacttttccc ggtcgcgaat actgacggcg agttgtgcga tctgcaggat
     3181 gatcccggcc atgatgatgg ccgctccgcc ggccgcgacc agcagccacg ggtgccactc
     3241 ggcgacatcg taatgctgca ttcggcgtgt catccccatg aggccgacga cataaagcgg
     3301 cccgaacgcg acataaaagc caatgaacca gcaccagaac gccgccttgc cgaggccctc
     3361 atgcagccgg aagccgaacg ccttgggaaa ccaataagta tagccggcga atgagccgaa
     3421 cagaaccccg ccgatgatga cattgtggaa atgcgccacc agaaaaaggc tgttatgcag
     3481 cacaaaatcg gccggcggca ccgccagcaa cacgccggtc atgccgccga tgacgaacgt
     3541 gatcatgaag ccgatcgccc atagcaacgg cgtggcataa accagccggc cgccgtacat
     3601 cgtgaacagc cagttgaaca ctttgactcc ggtcggcacc gcgatgatca tcgaggcgat
     3661 cccgaagatc gcgttgacat ccgcgccggc gcccatggtg aaaaaatggt gcaaccacac
     3721 catgaacgac agcacgcaga tggccatcgt cgccagcacc atcgaccggt agccaaacag
     3781 cggcttgcgg gaaaatgtcg cgaccacctc agagaaaacg ccgaacgcgg gaagaatgag
     3841 gatgtagacc tccggatggc cccagatcca gatcaggttc atgaacatca tcatgttgcc
     3901 gccggcttca ttggtgaaga aatgaaatcc gaggtagcga tccagcagca gcatcgccaa
     3961 cgttgccgtc agcaccggaa aagcagcgac gatcagcaga ctggaagcca gcgtggtcca
     4021 acagaacacc ggcatccgca tatacgtcat gcccggcgca tgcagcttca gcaccgtcgt
     4081 gacgaaattg accccggtca gcaaagtgcc cacaccggag atctgcaacg accaaaggta
     4141 gtaatcgacg ccgacgccgg gcgagtaggt gatctccgac agtggcggaa acggcagcca
     4201 tccggtacgc gcgaactcgc caacgaccag cgaaatgttc accaggagcg cgccggtggc
     4261 ggtgagccag aagctgaccg agttcaacgt cggaaatgcc acgtcgcgaa tgccgagttg
     4321 cagcggcatc acgaggttca tcagcccgat cacgaaaggc atcgcgacaa agaagatcat
     4381 cagcgtgcca tgggccgaga agatctggtc gtaatgctcg ggcggcagat agccctcgga
     4441 gtggaaggcg atcgcctgtt gcgaccgcat catgatcgcg tcggcgaaac cgcgcagcag
     4501 catgaccatc gcgaacagga tgtacatgat gccgatccgc ttgtggtcga cgctggtgat
     4561 ccattcccgc cacagatacg gcatccatcc tttcagcgtg atccaggcca gcacggcaat
     4621 gatcaccagc aggaccacag cgccggttac cagcgggatc ggctggtcga acggaatggc
     4681 agaccaggag agtttgccca acatgctaac gcagcgtccg cggcgatacg gtcacgttcg
     4741 gcgtgccgct ttcaggtccg ggaccaggtg gcagtttctg agtgacgatc gcgttgaaca
     4801 ggtccggatc gacggcacga taagtgaacg gcgttgtgtt catgctctgc ctctccagtg
     4861 cggcgtagct cgtcggatcg agggacggac cggtggagcg tgtggccgcg atccacgcag
     4921 tgaactgcgc cgtcggcacg gcccgtacgt cgaaatgcat gtcggagaag ccatcgccgc
     4981 taaagtgact ggccaggcct g
//
LOCUS       DATAVD010000872         2356 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2689015, whole genome shotgun sequence.
ACCESSION   DATAVD010000872 DATAVD010000000
VERSION     DATAVD010000872.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2356
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2689015"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..633)
                     /locus_tag="VHX39_16735"
     CDS             complement(<1..633)
                     /locus_tag="VHX39_16735"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX3992818.1"
                     /translation="MTTLETLKIESPQEHVVLVSLNRPEVANAMNTQMGLDLLATFDG
                     FCAAPNRQRCIIITGSGSKAFCAGGDLKQRNGMTDEQWQDQHLIFERAIRAMIDCPVP
                     MIAAVNGAAYAGGLEIALCADFIYAADHARFALTEVTLGIMPGAGGTQNLPRAVGARR
                     AKEIMLTGRPFSAQEALDWGMVNRLCTSDALLPDALHTASVIAGNAPISTR"
     gene            complement(630..1742)
                     /locus_tag="VHX39_16740"
     CDS             complement(630..1742)
                     /locus_tag="VHX39_16740"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX3992819.1"
                     /translation="MSLPTILPPPHGAEWPELTSDQAGMNWMRLEEAARFATENETPW
                     PYDLRRHLESGFFEPAPFNEILGPIRPRGEPNGLVLRAGRKVVSWGDTRQVDFTFSAA
                     KSYLSLLAGIAVMDGLIRDLDEPVGRTVHDGGFDGPHNGAITWRHLLQNTSEWEGVLF
                     GKSDVIDRNRNLAVEGKGRKGDPRPLQRPGDFWEYNDVRVNRLSLALLRRFGRPLPEV
                     FAERIMGPIGASADWSWHGYRTSSVEVDVKWMESVAGGTHWGGGMLIHAEDQARLGLL
                     MLRRGEWNGKQVVPESWIAESLKPCSLKSTYGLLWWLNTAHGRYASAPTGSFFASGAG
                     GNLTWIDPEHDLVAVMRWLDPTATDTFIRLIMQAMG"
     gene            1835..>2356
                     /locus_tag="VHX39_16745"
     CDS             1835..>2356
                     /locus_tag="VHX39_16745"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEX3992820.1"
                     /translation="MRQIDQDSRRRLLLSSPLFDALPREALDDILLQATEKSVRRGQT
                     VFQKGDEGSYMVAVLSGRIRISATSPEGREVTLNMIDAGEVFGDMALLSGKPRSADAT
                     ALEDSTLMVVERRHFLPYLTSNNELTLRVIDVLCERLRETSETLGSFAMLDLPGRLAR
                     KLLSLAGEYGKTAN"
BASE COUNT          494 a          740 c          667 g          455 t
ORIGIN      
        1 acgggttgat atcggcgcgt ttccggcgat tacggaggca gtatgcaacg catcaggcaa
       61 cagagcgtcc gatgtgcaaa gtcgattgac catgccccag tccaacgcct cctgtgcgga
      121 gaacggcctc ccggtcagca tgatttcctt ggcccgtcgc gcacccaccg ctctgggcag
      181 attttgtgtg ccgccggcgc ccggcatgat gcccaaagtc acttcggtca aagcaaatcg
      241 cgcatggtcg gcggcgtaga taaaatcggc acaaagcgcg atttccaagc cacccgcata
      301 ggccgcgcca ttaacggcag caatcatggg aaccggacag tcgatcatgg cacgaatcgc
      361 ccgctcgaaa atcagatgct ggtcctgcca ctgctcgtcg gtcataccgt tgcgctgctt
      421 cagatcgccg cccgcgcaaa acgccttcga gcccgacccc gtaatgataa tgcatcgttg
      481 ccgattgggc gccgcacaga agccgtcgaa tgtcgcgagc aaatcaagac ccatttgggt
      541 gttcatcgca ttcgcgactt caggccggtt cagcgaaaca agcacaacgt gttcctgagg
      601 cgactcaatc ttgagtgttt cgagcgttgt catcccatgg cctgcatgat caatctgatg
      661 aaggtatcgg tcgcggttgg atcaagccaa cgcattacgg caaccagatc atgttccgga
      721 tcgatccagg taaggttgcc gccagcgccc gaggcgaaga aactaccggt cggcgcacta
      781 gcgtaacggc cgtgcgccgt gttgagccac cataacaggc cataagtgga cttcaacgaa
      841 catggcttca atgactcggc aatccagctt tcgggtacca cttgtttccc attccattcg
      901 ccgcggcgca gcatcaacag acccagccgc gcctgatcct cggcatgaat gagcatcccg
      961 ccgccccagt gcgtgccacc tgctaccgac tccatccact tgacatcgac ttctacgctg
     1021 gaggtccggt aaccgtgcca ggaccaatcc gccgatgcac cgatcggacc catgatgcgc
     1081 tcagcgaaca cctcgggaag cggacggccg aaacggcgaa gcagcgccag gctcagacga
     1141 ttgacccgaa cgtcattata ttcccagaaa tcgcccggtc gttgcagcgg cctcggatcg
     1201 cctttgcggc ccttgccttc gaccgcgagg tttcgattgc ggtcgatcac atccgacttg
     1261 ccgaacagca ccccttccca ctccgaggta ttctgcagca ggtgccgcca cgtgatcgcg
     1321 ccgttgtgtg gtccgtcaaa ccctccgtcg tgcacggttc gtcccacagg ctcgtcgagg
     1381 tcacggatca agccgtccat gaccgcgatt ccagccagca gactcagata gctctttgcc
     1441 gccgagaacg tgaaatcgac ctgccttgtg tcgccccaac tcacgacttt gcgtcccgcc
     1501 cgcagcacga gcccgttcgg ttcgcctcgc gggcgaatgg gaccgaggat ttcgttgaaa
     1561 ggtgccggct cgaaaaaccc gctctccaga tggcgacgca aatcatacgg ccagggcgtc
     1621 tcattttcgg tggcgaagcg ggcagcttcc tccagcctca tccagttcat cccggcctga
     1681 tccgaggtta gttcaggcca ttccgcgcca tgcggcggcg gcaggatggt gggcaagctc
     1741 atacaggtct cccggcgacg gacggtcaga ctatgaccga ccagcggatg ggggcatagt
     1801 ggctgcccga gcggcaaccg gggggcaagg tccgatgcgg caaatcgacc aagattcaag
     1861 gcgtcgactg ttgctttcaa gcccgctatt cgacgcctta ccgcgtgagg cgctcgatga
     1921 catcctgctt caggcaaccg agaaatccgt gcgtcgcgga caaacagtgt tccagaaggg
     1981 tgatgaaggc tcttatatgg ttgcagtgct gagtggccgc atccgtatca gcgcgacctc
     2041 gccggagggg cgggaagtta ccctcaacat gattgatgcc ggagaagtgt ttggcgatat
     2101 ggcactgctc agcggtaagc cccgtagtgc tgacgccacc gctctggagg acagcaccct
     2161 tatggttgtt gagcgccggc atttcttgcc atacctgaca tccaacaacg agttgacgtt
     2221 acgtgtgatc gacgtgcttt gcgaacgcct acgcgaaacc agcgaaaccc tcggcagttt
     2281 cgcgatgctc gacctgccgg gcagactggc tcggaagctc ctcagtcttg ccggggaata
     2341 cggaaaaacc gcgaac
//
LOCUS       DATAVD010000873         6744 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3433683, whole genome shotgun sequence.
ACCESSION   DATAVD010000873 DATAVD010000000
VERSION     DATAVD010000873.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6744
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3433683"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..340
                     /locus_tag="VHX39_16750"
     CDS             <1..340
                     /locus_tag="VHX39_16750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3992821.1"
                     /translation="WSKSIRALAACPNVVVKLGGMAMRINGWDFHTKPEPPSSEELAA
                     AWKPYVETCIEAFGTDRCMFESNFPVDKGSYGYAAFWNACKILAKGASVAEKTALFSG
                     TAARFYRLDI"
     gene            complement(372..1427)
                     /locus_tag="VHX39_16755"
     CDS             complement(372..1427)
                     /locus_tag="VHX39_16755"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
                     /protein_id="HEX3992822.1"
                     /translation="MAPNTKRVFYVNNVSAQVYLDMLAKRPDIHVDKLENDSPESAIE
                     PVLAQAHAYQIGSSRQELVMKLQGYTPLLSRCPNLLVLSTNGAGFDTVNLADATAAGV
                     AVVNQAGGNKEGVAEHVMAMMLALSKRIVMSDHAMRSGGTYDRRDFMGDDVQGRTIGI
                     IGIGHVGTRVAELCRGLFRMRVIAYDPYQTAEQIAARGAEKAATLEDLLRAADYVSVN
                     CPHTKETRGMMGAAQFALMQKHAYFITTARGGIHDEDALAAALTAKQITGAGLDVWED
                     EPPPSDHPLLRFDNVLVSPHTAGITRQSRHNIAKIAAEQMLDILDGKKPERLLNPEVW
                     EAYRNRFAAILGFRPEA"
     gene            1512..2261
                     /locus_tag="VHX39_16760"
     CDS             1512..2261
                     /locus_tag="VHX39_16760"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3992823.1"
                     /translation="MTVAGKVVLITGAARGLGFEYARSLGQAGAHVVAGDVLDCSAAV
                     AAAGNDAFGMTLDVADIASTGAMVERAMERFGRIDALINNAALYGSLRGGRFNQIPET
                     DWDAAMAVNVKGIWNCCKAVVPAMRQSGGGSIVNIASLAATYGMPFALHYTTSKAAVI
                     GLTRGLARELGRDFIRVNAVAPSAVMTEGTVEFLGEKLDRGLEVIRTGQSIQRTLEPA
                     DLVGTITWLIGDGSKFVTGQTIAVDGGTVML"
     gene            complement(2268..3971)
                     /locus_tag="VHX39_16765"
     CDS             complement(2268..3971)
                     /locus_tag="VHX39_16765"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3992824.1"
                     /translation="MRDYRLLIVDDDAVDRRLYGKLLAQLGPDTCQVEQAVDGMDGLA
                     ALRAGGFDCVLLDFRLPDMTGLEFLTAALVDGELPCAVVLITGQGNEAIAVQAMKRGV
                     RDYLVKDQINATSLWRTMTQAVTQTELQRQLAASLRDLTAANLALEQEAAIRIAAEAE
                     MRTAKEAAEHANRAKTRFVAMVTHELRTPLNGILGYAQLLRIESGLSPRQDAHVGAMM
                     QAGRHLLEMIERVLDFASIESGRMELLPAKVSIRDLTEGCVAFISPIATERALSLRVV
                     NAHDAPRYIVADPSRLRQVLLNLLGNAVKYTDSGSVDLRVLAGSQPNGLRIEVADTGR
                     GIDEASRDRLFQDFERLEATTTVEGTGLGLAIAARIIRLMGGSIHYSANPGGGSVFWF
                     ELPPGEPVAPSLPEPAKIDAPVPRRHVLLVDDIKINRDIIGAFLDAAGHESVMAEGGQ
                     EAVQLASERQFDVILMDVRMPKVDGLEATRRIRALPGTLGQVPILALTAYTFPDQVAQ
                     CREAGMDGHLPKPVDYKTLINGVDNVIAKVMAGRNPGREPPRREILPDRTGSEVRVSI
                     D"
     gene            4122..5264
                     /locus_tag="VHX39_16770"
     CDS             4122..5264
                     /locus_tag="VHX39_16770"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3992825.1"
                     /translation="MTTESDAAITAPPVPSRPSLSAEDRFARVVEASPTALVLAGRSG
                     RIEMVNGQAERMFGYDRAALHGQPLEMLLPARFRDRHIVLRGGFFTAMSPRMMGEGRD
                     LFGLRADGTEFRLEIGLNPIDIDGEPMVLAGIIDVTARYQIELEKEQQRAELERSNAD
                     LEEFAYAASHDLKAPLRAISHLVQWIVDDIEPVANQETLDNLKLLQGRVARMQMLLDG
                     LLAYSRIGHHSTTLEDVNIADVVREVVAMLAPPPGFVVACEGTLPMIRTHRVPIQVVL
                     ENLISNGLKHHDRTGGRITVRARMVNGMTEFRVTDDGPGIPPQFHDRIFLMFQTLASR
                     DDVESSGIGLTIVKKKVQTHGGRIWVESNPPERGTTFVFTWKEDAA"
     gene            5261..5689
                     /locus_tag="VHX39_16775"
     CDS             5261..5689
                     /locus_tag="VHX39_16775"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3992826.1"
                     /translation="MTGNTVNILLVDDDKVDVMAVKRSFRELKIANPVIEARNGIEAL
                     DCLRGQNGREKVSSPCLVLLDLNMPRMGGIEFLAELRRDPDLRGTLVFVMTTSAAEDD
                     RTRAYQKNVAGYVLKHRPGQSFLEAISMLEHYWRVIEFPE"
     gene            5974..>6744
                     /locus_tag="VHX39_16780"
     CDS             5974..>6744
                     /locus_tag="VHX39_16780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX3992827.1"
                     /translation="MRYRVRHTTSYAYGTPVELAAHMVHLRPRPRPWQTVISERITTD
                     PAPARRRDGLDHFGNYVTWLFMDLPHADFEVTSVSVVDVDCPPPPATEDTLPWEDVVQ
                     AAHTPEGWQAAEFRFGTAMAPINPEAKAYVGKSFAPGRPVLEALLDLNNRFYKEFRFR
                     SGVTSIATPVTQIMQRREGVCQDFSHAMISGLRGIGLPARYTSGYIRTRPPPGQVKRQ
                     GADQSHAWVGCWLGPEHGWVDIDPTNGIVVKDEHVVLGW"
BASE COUNT         1243 a         2148 c         2095 g         1258 t
ORIGIN      
        1 ttggtcgaag tccatccgag ccttggcggc ttgcccgaac gtggtggtga aactcggcgg
       61 catggcgatg cggatcaacg gctgggattt ccataccaag ccggaacccc cgtcgtctga
      121 ggagctggcc gccgcctgga aaccctatgt cgaaacctgc atcgaagcgt ttggcacgga
      181 tcgctgcatg ttcgagagca atttcccggt ggacaaaggc tcctacggct acgcggcgtt
      241 ctggaacgcc tgcaagatac tggcgaaagg cgcctccgtt gctgaaaaga ccgcactgtt
      301 cagcgggacg gcggcgcgct tctatcgtct cgacatttag ttacgaacga aacggtgccg
      361 cctttctggg cctacgcctc cggacggaag ccgaggatcg cggcgaaacg attgcgataa
      421 gcctcccata cctcggggtt cagcagccgc tccggcttct tcccatcgag gatatccagc
      481 atctgttcgg cggcgatctt cgcgatgttg tggcgcgact gacgggtgat gccggcggtg
      541 tgcgggctga ccagcacatt gtcaaaccgc agcaacggat ggtcggacgg cggcggctca
      601 tcttcccaga catccaggcc cgctccggtg atctgcttcg cggtcagcgc ggcggccagc
      661 gcgtcctcat cgtggatgcc gccccgagcg gtggtgatga aataagcgtg cttctgcatc
      721 agcgcgaatt gtgccgcccc catcatgccg cgcgtttcct tggtatgcgg gcagttgacc
      781 gagacgtaat cggcggcgcg cagaagatcc tccagcgtcg cggctttctc ggcaccgcgg
      841 gcggcgatct gttcagcggt ctgatacggg tcgtaggcga tcacccgcat ccggaacaag
      901 ccgcggcaca gttccgccac gcgggtgccc acgtggccga tgccgatgat cccgatcgtc
      961 cggccctgaa cgtcatcgcc catgaaatcg cgccggtcat aggtgccgcc gctccgcatc
     1021 gcgtgatccg acatgacgat ccgcttcgac aacgccagca tcatcgccat gacgtgttcg
     1081 gcgacgcctt ccttgttacc ccccgcctgg ttcaccaccg cgacccccgc cgccgtggcg
     1141 tccgccaggt tgaccgtgtc gaagccggcg ccattggtgg acagcaccag caggttgggg
     1201 caacgcgaca gcagcggcgt gtagccttgc agtttcatca ccagttcctg ccggctgctg
     1261 ccgatctggt aggcgtgcgc ctgcgccagc accggctcaa tcgcggactc cggcgagtcg
     1321 ttttccagtt tgtccacgtg gatgtccggc cgcttggcca gcatatcgag atacacctgg
     1381 gcggagacgt tgttcacgta gaacacccgc ttggtattcg gcgccattgt tgatgtttcc
     1441 tgagacgatt aggcttcagg cattagccca atgtcgcgcc gctgggcaaa tttcgcagga
     1501 aggaaaccat catgaccgtc gccggaaaag tggtgttgat taccggggcc gcgcgcggcc
     1561 tgggcttcga atatgcccgc agtctcgggc aggccggtgc ccatgtcgtg gccggcgacg
     1621 tgctggactg ttcggcggcg gtggcggcag cggggaacga tgcgttcggc atgacgctgg
     1681 atgtcgccga tatcgcgtcc accggcgcga tggttgagcg ggcaatggaa cggttcggcc
     1741 gcatcgacgc gctgatcaac aacgccgcgc tgtacgggtc gctgcgtggc ggccggttca
     1801 accaaattcc cgagactgac tgggacgcgg ccatggcggt caacgtcaag ggcatctgga
     1861 attgctgcaa ggccgtcgtg ccggcgatgc gccagtcggg cggcgggtcc atcgtcaaca
     1921 ttgcctcgct ggcggcgacc tacgggatgc cgttcgcgct gcactacaca acctccaaag
     1981 ccgccgtgat cggtctgaca cgcggcctgg ctcgggaact tggacgggat ttcatccggg
     2041 tcaacgcggt ggcgcccagc gcggtgatga cggagggtac cgtggaattt ttgggggaga
     2101 aactggatcg cggcctggag gtgatccgca ccggtcaatc gatccagcgg acgctggaac
     2161 cggccgatct tgtcggcacg atcacctggc tgatcggcga cggcagcaaa ttcgtgacgg
     2221 gccagacgat cgcggtggac ggcggaaccg ttatgctgtg ataaaattca gtcgatcgac
     2281 acccgaacct cagatccggt tcggtcgggc agaatctcac ggcgcggcgg ttcccgaccg
     2341 gggtttctgc ccgccatgac ctttgcgatc acgttatcga ccccgttgat cagcgtcttg
     2401 taatccaccg gcttgggaag gtgcccgtcc atgccggcct ctcggcactg cgccacctgg
     2461 tcagggaacg tgtaggcggt cagcgccagg atcggcacct ggccgagggt gccgggcagc
     2521 gctcgtatgc gcctggtcgc ctccagcccg tccactttcg gcatccgcac atccatcagg
     2581 atcacgtcga actgccgttc cgaggccagt tgcacggctt cctgaccacc ttcggccatg
     2641 accgactcat gccccgccgc atccaggaag gcgccgatga tgtcacggtt tatcttgata
     2701 tcgtccacca gaagcacgtg tctgcgcggc accggcgcgt cgattttcgc cggctccggc
     2761 aagcttggcg cgaccggttc gcccggcggc aactcgaacc agaacacgct gccgccgccg
     2821 gggttggcgc tgtaatggat cgagccgccc atcagcctaa ttatccgagc ggcgatcgcc
     2881 aggcccaggc cggttccctc gacggtcgtc gtggcttcca ggcgctcaaa atcctggaac
     2941 aggcggtcgc ggctggcttc atcgatgccc cgaccggtat cggcgacctc gatgcgcaat
     3001 ccattcggct ggctgcctgc cagcacgcgc aggtcgacgc tgccgctatc ggtgtatttc
     3061 accgcgttgc ccaacagatt gagcagcacc tgacgcagcc gcgacggatc ggcgacaata
     3121 taccgcggtg cgtcatgcgc gttgaccacc cggaggctca gcgcgcgttc cgtcgcgatc
     3181 ggactgatga acgcgacgca tccctcggtc aggtctcgaa tcgaaacctt ggccggaagc
     3241 agttccatcc gcccgctctc tatactggcg aaatccagta cacgttcgat catttcgagc
     3301 aggtggcgcc cagcctgcat catcgcgccg acatgcgcgt cctgccgcgg cgaaagcccc
     3361 gattcgatgc gcagaagctg agcatagccc aagatgccgt tgagcggtgt tcgcaactca
     3421 tgcgtcacca tggcaacgaa gcgggtcttc gcccggttcg catgttccgc ggcttccttg
     3481 gcggtgcgca tttcggcttc ggcggcgatg cgaatcgccg cctcctgctc cagcgccagg
     3541 ttggctgcgg tgagatcgcg cagcgacgcc gcaagctggc gctgcaactc cgtctgggtc
     3601 accgcctgcg tcatcgtccg ccacaggctg gtagcgttga tctgatcttt taccaggtag
     3661 tcccgtacgc cgcgcttcat cgcctgtaca gcgatcgctt cattgccttg cccggtaatc
     3721 agcaccaccg cacatggcaa ttcaccatcc accagggcag cggtcaggaa ttccagcccg
     3781 gtcatgtccg gcagcctgaa atccagtaga acacaatcga atccgccggc gcgcaacgcc
     3841 gccaaaccgt ccatgccgtc caccgcctgc tcgacttgac aggtgtcggg cccaagctgc
     3901 gccagaagtt tgccatacag ccgccgatcg acggcatcat cgtcaacgat caacagacgg
     3961 tagtctcgca taccgggtat ccttgatact actccgtggc ttccacaata cggcggcgac
     4021 gttaaggaag agttaagatc gcaccatgcc ggaacgatgt ttattctttg ttaatgtctg
     4081 tgtggcagaa tagcccttgg ttagccccaa ggagggtgtt gatgacaacg gaatccgatg
     4141 ccgccataac cgcgcctccg gtcccttcgc ggcccagcct gtcggccgag gatcgatttg
     4201 cccgcgttgt ggaagcatcg cccaccgccc tggtccttgc cggaagatcc ggccgaatcg
     4261 agatggtgaa cggccaggcc gaacgcatgt tcggatacga cagagcggcc ttgcatggcc
     4321 agccattgga aatgctgctg cctgcacgct ttcgcgaccg gcatatcgtt ctgcgcggcg
     4381 gcttcttcac cgccatgtcg ccgcgcatga tgggcgaagg gcgggatctg ttcggcttgc
     4441 gtgcggacgg cacggagttc cggctggaga tcggactgaa tccgatcgat atcgacggcg
     4501 aaccgatggt gctggccggt atcatcgatg tcacggcacg ataccagatc gaactggaga
     4561 aggagcagca gcgagccgaa ctggagcgat ccaacgccga cctggaggaa ttcgcctacg
     4621 ccgcatcgca cgatctgaaa gcgccgctgc gcgcgatctc ccacctcgtg caatggatcg
     4681 tcgacgacat cgaaccggtg gcgaaccagg agacgctcga taatctcaag ctgctgcaag
     4741 ggcgcgtggc gcgcatgcag atgctgctgg atgggctgct ggcgtattcc cggatcggtc
     4801 atcacagtac aacgctcgaa gacgtcaata tcgccgatgt ggtgcgtgag gtcgtcgcca
     4861 tgctggcccc gccgccgggc ttcgtcgtgg cctgcgaggg caccttgccg atgatccgca
     4921 cccatcgcgt gccgatccag gtcgtgttgg aaaacctgat cagcaacggc ctgaagcatc
     4981 atgacagaac cgggggccgc atcaccgtcc gggcgcgaat ggtgaacgga atgacggaat
     5041 ttcgtgtcac cgacgacggg cccggcatcc cgccgcaatt ccacgatcgt atttttctga
     5101 tgttccagac cttggcgagc cgcgacgatg tcgaatcaag tggaattgga ctgacgatcg
     5161 tgaagaaaaa agtgcaaacc cacggtggtc gtatttgggt cgaaagcaat ccacctgagc
     5221 gcggcaccac atttgtcttt acatggaagg aagacgcggc ttgacaggca acacagtgaa
     5281 catcctgctg gtcgatgacg acaaggtcga tgtgatggcg gtcaaacgat cgttccggga
     5341 gttgaagatc gccaatccgg tgatcgaggc acgcaacggc atcgaggcac tggattgtct
     5401 gcgcggccag aacgggcgcg aaaaagtgtc ttccccgtgc cttgtgctac tcgatctcaa
     5461 tatgccgcgc atgggcggca tcgaattcct cgcggagctg cggcgcgatc ccgatctccg
     5521 cggtacattg gtcttcgtga tgaccacatc ggcggccgag gacgaccgga cgcgcgccta
     5581 tcaaaagaat gtcgccgggt atgtcctgaa acaccgtccg gggcaaagct ttctcgaagc
     5641 gatcagcatg ctcgaacact actggcgggt gatcgaattt ccggagtgaa cccggcatgc
     5701 gccttttatc gctgtgaaga gtgcgacgta tgctggacgc actggcttgt atcgcgcatc
     5761 agagaagccg tgacgaccac gagaccagcg gtgtcgggct gtcgatcgtc cagcagatcg
     5821 tcgagcgcgg cggcggaacg gtctgggtcg aaagcgcccc accccggcgg tgcgcggttt
     5881 ttccgctcac ctggccgaaa gcggtcatcc cccgaccacc gccaaaggcg ctttgcaatt
     5941 cccgcggccg ggaaagtact ctaaacagtc cgcatgcgtt atcgagtccg acacaccaca
     6001 agctacgcct atggcacacc tgtcgaactg gccgcgcaca tggtgcatct gcgcccgcgg
     6061 ccgcgcccgt ggcagaccgt catctccgaa cgcatcacca ccgacccggc gccggcccgc
     6121 cgtcgcgacg gcctggacca tttcggcaat tacgtgacct ggctcttcat ggacctgccg
     6181 cacgccgatt tcgaggtgac gtcggtttcc gtggtcgatg tcgattgccc accgccgccc
     6241 gccacagaag acacactgcc gtgggaggac gtggtccagg cggcgcacac cccggaaggg
     6301 tggcaggccg ccgaattccg cttcggcacc gcgatggcac cgatcaaccc cgaggcgaaa
     6361 gcctatgtcg gcaaatcctt cgccccgggc cggccggtgc tggaggcgct gctggacctg
     6421 aacaaccgtt tctacaagga attccgcttc cgatccgggg tgacctcgat cgccacgccg
     6481 gtgacgcaga tcatgcagcg gcgcgaaggg gtctgccagg atttctccca tgcgatgatc
     6541 agcgggctgc ggggcatcgg cctgccggca cgctacacct cgggctatat ccgcacccgg
     6601 ccgccaccgg gccaggtcaa gcgccagggc gcggatcaat cgcacgcctg ggtcggctgc
     6661 tggctgggtc ccgaacacgg ctgggtcgat atcgacccga ccaacggcat cgtggtcaag
     6721 gacgagcacg tcgttctcgg ctgg
//
LOCUS       DATAVD010000874         2381 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2505053, whole genome shotgun sequence.
ACCESSION   DATAVD010000874 DATAVD010000000
VERSION     DATAVD010000874.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2381
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2505053"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1356
                     /locus_tag="VHX39_16785"
     CDS             <1..1356
                     /locus_tag="VHX39_16785"
                     /inference="COORDINATES: protein motif:HMM:NF014594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA hydrolase/transferase C-terminal
                     domain-containing protein"
                     /protein_id="HEX3992828.1"
                     /translation="AEHAAGRGFKVSVLTGASTGNSIDGALAAANAISFRAPYQGNAA
                     LRKKINAGEVHFVDMHLSMLPQQVRYGFFGKIDLAIVEAVDVTAGGAVVLSSSVGAAN
                     TYLRTAGKILIEVNAHHPQQLLGMHDIFEPKDPPARTELPIYRASDRIGSPICLVDPR
                     KIAGVVMTNEPDEIGAFDAPDAVTERIGQNVTEFLVNEMRAGRIPDTFLPLQSGVGNI
                     ANAVLGALGRDTSIPAFEMYTEVLQDSAIPLIDAGRLKFASTCALTLSPQASGHVYGN
                     LDFFRDRILMRPQEISNNPEVARRLGIISMNTAIEADLGGSVNSSHIMGRQMMNGIGG
                     SGDFTRSAYISIFSCPSTQKNGKISTIVPVVSHSDHSEHSVQVLVTEHGVADLRGKDP
                     LERARIVIDNCAAPEYREQLNAYLAFVRVGHEALSFRSAFEMHHKFALDGDMRGVTWS
                     H"
     gene            1473..>2381
                     /locus_tag="VHX39_16790"
     CDS             1473..>2381
                     /locus_tag="VHX39_16790"
                     /inference="COORDINATES: protein motif:HMM:NF018530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HEX3992829.1"
                     /translation="MVIAVVSVLGLALGEIKFGPVHLGIAGPLFVGLALGHFGFKMNM
                     DILGFARDFGLVLFVYAIGIRVGPGFFSAFKKDGALLNAFTFVIVGTGGLIAVAIHYV
                     VGLPLEVVTGLFAGGTTNTPSLAAAQQMLSNLHATPAQVAVPGLAYAVSYPFGIIGIL
                     LTMGLTRMLFHVNVPAEAKAFAESRAPNLPASERMSIEIKCSAVEGVALPEVPGLRDV
                     AMGVIVSRVMRDGSQHVAMPTDVFHIGDVVLANGPRPQLEKLRDMLGVEAPVPLHKMD
                     SPLSSRDMVISQTKIVGKHIADLHIRD"
BASE COUNT          445 a          696 c          725 g          515 t
ORIGIN      
        1 gccgagcatg cagccggccg cggttttaag gtgagcgttc tgacaggcgc gtcgaccggc
       61 aactcgatcg acggtgcctt agcggccgcc aacgcgatca gtttccgcgc gccctatcag
      121 ggcaatgccg ccctgcgcaa aaagatcaac gcgggcgagg tgcatttcgt cgacatgcat
      181 ctatctatgt tgccgcaaca ggtccgctat ggattcttcg gcaagatcga ccttgcaatc
      241 gtcgaggcgg tcgatgtgac ggcgggtggc gcggtcgtgc tgtcgtcttc ggtcggtgcg
      301 gcgaacacct atttgcgcac cgccgggaaa atcctgatcg aggtcaacgc gcaccatccg
      361 cagcaattgc tcggaatgca tgatatcttc gagccgaagg atccgccggc gcgcaccgaa
      421 ctaccgatct atcgtgcgag cgaccggatc ggctcgccga tctgtttggt tgatcccagg
      481 aagatcgccg gcgtggtgat gaccaatgaa ccggatgaaa tcggcgcgtt cgatgccccc
      541 gatgcagtga ccgaacggat tggccagaac gtgaccgaat tcctggtcaa cgaaatgcgc
      601 gccgggcgca ttccggacac gttcctgccg ctgcagtcgg gcgttggtaa cattgccaac
      661 gcggtgcttg gcgctttggg ccgcgacacg tcgataccgg cgttcgaaat gtataccgaa
      721 gtgctgcagg acagtgcgat tccgctgatc gacgcaggcc ggctgaaatt cgcctccacc
      781 tgtgcgttga ctctcagccc gcaggcttcc ggtcatgttt acggcaacct cgacttcttc
      841 cgtgaccgga ttctgatgcg gccgcaggaa atttcgaaca atcccgaggt cgcccgccgg
      901 cttggcatca tttcgatgaa taccgcgatc gaagccgatc tcggcggcag cgtgaattcc
      961 agccatatca tgggcagaca gatgatgaac ggcatcggcg gctcaggtga cttcacgcgc
     1021 agtgcgtata tctcgatctt ctcctgccca tcgacgcaaa agaacggcaa gatctccacc
     1081 atcgtgccgg tggtcagtca ctccgaccac agcgagcact cggtgcaggt gctggtcacc
     1141 gagcacggcg ttgccgattt gcgcggcaag gacccgctgg agcgggcgcg catcgtcatc
     1201 gacaactgcg cggcaccgga ataccgcgag cagcttaacg cttatctcgc ctttgtccgg
     1261 gtcgggcacg aggcattgtc attccgatcc gcattcgaaa tgcaccacaa gttcgccctc
     1321 gacggcgaca tgcgtggggt gacctggtcg cactgaaaat accgcgaacg aacctggcga
     1381 acgtctgaaa cgatgtttct tgtctgcaac agaggtgata catgtggttc tccaaccttc
     1441 ttttcagcgg cgccgggaca gcaaacgcgg tcatggtcat cgcggtggtt tccgtccttg
     1501 gcctggcgct tggcgagatt aaattcggtc cggtgcatct gggtatcgcc ggtccgctgt
     1561 ttgtcggtct ggcgctaggt cattttggtt tcaagatgaa catggatatt ctcggctttg
     1621 cccgcgactt cgggttggtc ctgttcgtct atgccatcgg catccgggtg ggacctggct
     1681 ttttctcggc cttcaagaaa gacggcgcgc tgctcaatgc gttcaccttt gtcattgttg
     1741 gaacgggcgg gttgattgct gtggccatcc attatgtggt tggactgccg ttggaagtgg
     1801 tcaccgggct gttcgccggc ggcacgacca acacgccgtc actggctgcg gcgcagcaga
     1861 tgttgtccaa tttgcatgcg accccggcgc aggtagcggt tcccggcctc gcttacgcgg
     1921 tttcctatcc gttcgggatt atcggtatct tgctcacgat gggactgacg cgcatgctgt
     1981 tccatgtcaa tgtcccagcc gaggccaagg cgtttgctga atcgcgtgca cccaacctgc
     2041 cggccagcga acgcatgagc atcgaaatca aatgttccgc ggtcgagggt gtggcgttgc
     2101 cggaagtgcc tggactgcgc gatgttgcca tgggcgtaat cgtgagccgg gtgatgcgcg
     2161 acggttcgca gcacgtggcg atgccgaccg acgtatttca tatcggcgac gtggtgctgg
     2221 ccaatggacc gcgtccccaa ctcgaaaagc tgcgcgacat gcttggggtc gaggcgccgg
     2281 ttccactgca caagatggac agcccactgt cgtcgcgcga tatggtgatc tcgcagacca
     2341 aaatcgtcgg caagcacatc gccgatttgc atattcgcga t
//
LOCUS       DATAVD010000875         2776 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_642833, whole genome shotgun sequence.
ACCESSION   DATAVD010000875 DATAVD010000000
VERSION     DATAVD010000875.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2776
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_642833"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..601
                     /locus_tag="VHX39_16795"
     CDS             <1..601
                     /locus_tag="VHX39_16795"
                     /inference="COORDINATES: protein motif:HMM:NF039976.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF6065 family protein"
                     /protein_id="HEX3992830.1"
                     /translation="SDIFWTCPELGDWEPLSPSAQLPGFSAAFDAAAPANLQGCAPPM
                     LTALPEPGTLQIWTGLMVRTLPGWHILVRAPANLPLSGGFVLYEGIVEADTWFGPLFT
                     NLRFTRTHSPITLQPDFPLLQLQPIAASTYTDEVLNATRLVPGMNGIGETDWNGYHRT
                     IVIPNEDPDRPFGAYAKQARKRRKATGAARGKLPVRSGG"
     gene            complement(683..1162)
                     /locus_tag="VHX39_16800"
     CDS             complement(683..1162)
                     /locus_tag="VHX39_16800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992831.1"
                     /translation="MDQVTSINLIDRPWELSVPDCRSDSPQHAVLIVRDPDRSSDYLE
                     SICEFLDIEIQHATTGDDLPTMLTTLRPMAVIADLDGEVQDGFHVMKMAADYDRSVPI
                     LLLTGYDPALLGAIDAVQEVWGLTRVATAAATAGIGALVDFICHAARDAGRPRALRV"
     gene            1725..2330
                     /locus_tag="VHX39_16805"
     CDS             1725..2330
                     /locus_tag="VHX39_16805"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3992832.1"
                     /translation="MDATPDMTRRPREPVQPEAIAPALFAHFVVRTSNFDAMRSWYQT
                     VLNARVVHDDGRLCFMTYDDEHHRLALVNVPGLQKPAADSWGLNHLAYSYNSLRDLLS
                     TYVRLRDRGIVPFRPINHGPTVSMYYHDPDGTGIELQVDTFPTKQEAQEWFSRDAFKE
                     NPIGVLFDPEELVKEFEAGVPEEELLTRPSGSAAPSLAARG"
     gene            complement(2402..>2776)
                     /locus_tag="VHX39_16810"
     CDS             complement(2402..>2776)
                     /locus_tag="VHX39_16810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992833.1"
                     /translation="QILTGGGGSDVFQFNGGGHTDTITDWNANDTIQFQASQSNALQA
                     LVGKATVTLTDINGGTRVSIGGNSITLTGVQATSLTASNFLLPPGVALNLVIDRNSPQ
                     GGFMAGGGFGSHSAGHGPGGFT"
BASE COUNT          572 a          882 c          759 g          563 t
ORIGIN      
        1 ctccgatata ttctggacct gtcccgagct cggcgactgg gagccactca gcccatcggc
       61 gcaactcccg ggattttccg ccgcattcga cgcagcggct ccagccaatc tacaaggctg
      121 cgcgccaccg atgctgaccg cgctgcccga gcccggcacg ctacaaatct ggactggcct
      181 gatggttcgc acgttacctg gctggcacat cctggtccgc gccccggcca acctgccgtt
      241 atccggtggt tttgtgctgt atgaggggat cgtcgaggca gacacctggt ttggcccgct
      301 gtttaccaat ctgcgattca cccgcactca cagccccatc acgctgcagc ccgacttccc
      361 attgttgcag ctgcaaccaa tcgccgcctc gacttacact gacgaggtgt tgaacgccac
      421 caggctggtg ccaggaatga acggaatcgg cgagacagac tggaatggct atcaccgaac
      481 gatcgtcata ccgaacgaag atccggatcg gccgttcggt gcttatgcga aacaggctcg
      541 caaacgtcgc aaagcaaccg gcgccgcgag ggggaagttg ccggtccggt ccggcggata
      601 gcaaagctgc ctcgcgctcc atcgtttccg gatgccggcg aacgccatag cagcgtgtgg
      661 cgttttgccg ctgctccggg ccctaaaccc gtaaagcccg cggccggccg gcatcccgcg
      721 cggcgtgaca aatgaaatcc accaaggcac caattccggc cgtcgcagca gcggtcgcca
      781 cgcgcgtcag accccagacc tcctgcacgg cgtcgattgc gcccaacagc gccgggtcgt
      841 aaccggtcag cagcaagatc ggcaccgagc ggtcgtaatc cgctgccatc ttcatcacgt
      901 gaaaaccgtc ctgcacttcc ccgtccagat cggcaatcac agccatcgga cgcaatgtcg
      961 tcaacattgt cggcagatcg tcgccggtcg tcgcatgttg aatttcaatg tcgaggaatt
     1021 cacagatcga ctccaaataa tcgctgcttc gatcgggatc gcgcacaatc agcacagcat
     1081 gctgaggcga atcactccgg caatccggca ccgataattc ccagggccgg tcaatgaggt
     1141 tgattgatgt aacctgatcc atgttgcctc ctttcgcggt aaacgagccg tgccattgcc
     1201 agctaacaag ctgcttgccg caacattaaa ccgagttacg aattaccata cgttagtaat
     1261 tcgtgggatc gcgctaaatc atcgtgaacg atcgttaaat gcctggctcg gttcacgcta
     1321 ttatttgtcc gtggcgttcg acacagactc gctgttttcc tggctggatt gcgtacggcc
     1381 cgaccgcatc atcggccttc actcgtccac aactgccaga tcctcaatat ctttccaact
     1441 ggcccgagtt tgttccagtc gttgagttta tctcagtgcc aaccttgcaa tatccgtatg
     1501 atttcgaacg gtaacatatg ccctaagccg cttcaacgaa gaactcgtga tgattccgca
     1561 ctgctgccgt cgtcgcccgt cctggtcaaa tgttcgttgg ggcctccgtg gatcactctc
     1621 ccggcgggat cggccataac cgacccatcc gattggatcg caggccgcaa cgggctacaa
     1681 tcgtcaataa agtgtgatat cattgcctga caggaggacc cactatggac gcaacaccag
     1741 acatgacccg ccgcccacgc gaaccagtac agcccgaggc gatcgctccc gcgttgttcg
     1801 cgcatttcgt cgtccgaacg tcgaatttcg acgcgatgcg cagctggtac cagacagtgc
     1861 tcaacgcccg cgtcgtgcac gacgatggcc gtctctgctt catgacctac gacgatgagc
     1921 atcaccggct tgcgcttgtt aatgtgccag gcctgcagaa gcctgcggcc gacagctggg
     1981 ggctgaacca cctcgcatac agctacaatt cattgcggga cttgctgtcg acctacgtcc
     2041 ggttgcgcga ccgggggatc gtcccgttcc ggccgatcaa tcacgggcca acggtgtcga
     2101 tgtattacca cgaccctgac ggaaccggga tcgagttgca ggtcgacacc ttcccgacca
     2161 agcaggaagc gcaagagtgg ttcagccgcg acgcgttcaa ggagaacccg atcggtgtgc
     2221 tgttcgatcc agaagaactg gtgaaggaat tcgaagccgg cgtgccggag gaggaattgc
     2281 tgacccgccc gtcaggctcg gcggctccaa gcctcgccgc acgcggctga cgacggtttt
     2341 ccatccatca gggtctcgat ctgccgcggg aattccctcg gtgaccgaga cccaatgatg
     2401 atcaggtaaa cccgccgggc ccgtgaccgg cagaatgact gccgaaccct cctcccgcca
     2461 taaagccccc ttgcggcgaa ttcctgtcga tcacgaggtt cagcgcgaca cccgggggta
     2521 acaagaaatt gctcgcagtc agacttgtgg cctgaacgcc agtgagggtg atgctgttgc
     2581 cgccgatgct aactcgggtt ccgccgttga tatcggtcaa agtcaccgta gctttgccca
     2641 cgagagcctg cagagcattg ctttgggatg cctgaaactg gatcgtatcg ttcgcgttcc
     2701 agtcggtgat ggtatcggtg tgacctcctc cgttgaactg gaagacgtca ctgcctccac
     2761 cacccgtcag gatctg
//
LOCUS       DATAVD010000876         5586 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3245885, whole genome shotgun sequence.
ACCESSION   DATAVD010000876 DATAVD010000000
VERSION     DATAVD010000876.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5586
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3245885"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1914)
                     /locus_tag="VHX39_16815"
     CDS             complement(<1..1914)
                     /locus_tag="VHX39_16815"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3992834.1"
                     /translation="MEMNAPIGTNVLDVDAQQGPVGKPMDRVDGKLKVTGGARYAYEV
                     SQGPATAYGYVVQASIGKGRIKTVDARLARRSPGVLLVLTYRNAPEQGTGNHHEAHPV
                     LTGPEVSYFGEPVAFVVAETFEQARAAAYLVRVAYDQSPGTYTLHDGLANARTPSGAG
                     APPDTTVGDFAGAFATAPVQLDVTYTTPLQSHAMMEPHATLAMWDGDKLILHTSNQML
                     DQGRAAVARTLKMPVENVRLLSPFIGGGFGSKLWVNADAILAAIAARQLQRPVKTALT
                     REQIFMVTTHRSDTIQRIRIGTDRDGRILAIGHEVVSGNLRTEETYEGAALQTRTLYA
                     GANRITRHRLVPLDIPVASSMRAPGEAVGLLALECAMDELAERLNVDPIELRICNEPM
                     EDPERHIPYSSRHLVPCLREGARQFGWNRRNPRPGQIRDGNWLVGIGVASATRGNPLQ
                     LSKANVRLDPNGVATVRMAMTDIGTGTYTILTQIAAEMLGLPPDRVRVQLGDTDFPWA
                     SGSGGSFGAASSGSALFDACDALRTKLARAAGMDPATARFADGRVVAGNQSKSLIELV
                     GTGMDADGSIEPGSTLKNFSQQSYGAHFAEVGVDADTGEIRVRRMLGVFTAGRILNAK
                     TARSQAIGGMIFGI"
     gene            complement(1929..2909)
                     /locus_tag="VHX39_16820"
     CDS             complement(1929..2909)
                     /locus_tag="VHX39_16820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003620027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEX3992835.1"
                     /translation="MKEFTYARANSPAQAATIAAASGTKVIAGGTNLLDLMKLQIETP
                     SQLVDINRLPLDKIEDAPDGGLRIGTLVRNSELAADQRVRDRYGVLSRALLAGASAQL
                     RNKATTGGNLLQRTRCMYFYDTTKPCNKRTPGSGCAALAGFNRMNAILGGSDQCIAVH
                     PSDMAVAMRVLDAKVQTVDAAGANRVIPIADLYRLPGATPQIETTLRAGEIITSVSLP
                     PPPPGRQIYRKVRDRASYAFALVSVAAVVDAVGGRIRSARIAFGGLAPRPWRVPGADE
                     ALSDVPVGAVGFDAAATAALNGARGYGGNDFKIPLARRTLHAVLTQATRT"
     gene            complement(2906..3562)
                     /locus_tag="VHX39_16825"
     CDS             complement(2906..3562)
                     /locus_tag="VHX39_16825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX3992836.1"
                     /translation="MYENEIRPGAVTRRVVLEVGTAASAVLISGRPSSALAADVPNPQ
                     PPAPPVTVDLLINGHEHSVSLDPRTTLLDTLREHLALTGTKKGCDHGQCGACTVLLEG
                     RRINSCLTLAVMHDGQAITTIEGLADGAKLQPLQALFVAHDGFQCGYCTSGQICSATG
                     MLSEHQAGMPSLVTADLATPRPDLTEAEIRERMSGNICRCGAYPNIVAAIKQAAEMPA
                     "
     gene            4000..4677
                     /locus_tag="VHX39_16830"
     CDS             4000..4677
                     /locus_tag="VHX39_16830"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3992837.1"
                     /translation="MVEQSEFHQRRVWGEEAIHRAGNLRQLALSLQRLLDSGKIDSSD
                     RPKTIRRANALAQAYRTLDMADELDPHSCVQGLRDIAAGLVEIFGHTVGSLVLSLDIE
                     PLSLTGEGRRALLLAVSELVINALRHAFIDRQRGILQIRLEHDQACHEGALFVADDGV
                     GPGDLTQGGGRGCSIVRDLAAVLDGDVVWRPSLLLGGTEVILRFPLPAVVAVSGVIAS
                     CRVPAEP"
     gene            4734..5261
                     /locus_tag="VHX39_16835"
     CDS             4734..5261
                     /locus_tag="VHX39_16835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007400004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HEX3992838.1"
                     /translation="MDHQYPTQDVPTALATPTDLGANATRDIAAALNGLLADVFALYL
                     KTKNFHWHMSGPHFRDYHLMLDEQSDQIFAMTDVIAERVRKIGQLTMHSIGEISRNQR
                     IVDNDTPFVTPQDMLAELREDNNELVKRMRQAHEMIDEQKDVATASLLEVFIDETERR
                     AWFLYEASHHTPHSL"
BASE COUNT         1094 a         1698 c         1685 g         1109 t
ORIGIN      
        1 aatgccgaaa atcatgcccc caatggcctg agatcgcgcc gtcttcgcat taaggatgcg
       61 accggcggta aagaccccca gcatgcgcct caccctgatc tcgccggtgt cggcatcgac
      121 gccgacctcg gcgaagtgcg ctccatagga ctgctgggaa aaattcttga gcgtgctgcc
      181 cggctcgatc gatccatctg catccatgcc ggtgccgaca agttcgatga gcgatttgga
      241 ttggttgccc gcgacgacgc ggccgtcggc gaagcgggcg gtggccggat ccatgccggc
      301 agctctcgcc aactttgttc gcagggcatc gcaggcatca aataatgccg aaccggagct
      361 ggccgctcca aaggaccccc ccgaaccgga cgcccaagga aaatctgtat cgcccaattg
      421 aactcgaacg cgatccggcg gaaggcccaa catctcggcg gcgatctggg tcaggatcgt
      481 gtaggtgccg gtgccgatat cggtcatcgc catgcggacc gtggcaacac cgttcgggtc
      541 cagccgcacg ttggccttgg aaagttgcag tgggttccca cgggttgccg acgcgacgcc
      601 gattcccacc agccagttcc cgtctcggat ttggccgggc ctgggattcc gcctgttcca
      661 tccgaattga cgcgcgcctt cgcgcagaca cgggaccagg tgacggctgg aatacggaat
      721 atgccgctct ggatcctcca tcggttcgtt acagatacgc aattcgatcg gatcgacatt
      781 gagtctttcg gcaagctcat ccatcgcgca ctcaagggcc agcaggccca ccgcctcgcc
      841 cggggcgcgc atcgatgagg cgaccggaat atccaacggc accagccgat ggcgggtgat
      901 ccgattggca ccagcgtaaa gcgtccgggt ctgcagggcg gctccttcat aggtttcctc
      961 agtccgtaga tttcccgaga cgacctcgtg gccgatcgcg agaatgcggc catcccgatc
     1021 ggtgccaata cggatccgtt gaatggtgtc ggagcggtgg gtggtgacca tgaatatctg
     1081 ttcgcgggtc agcgcagtct tcaccggccg ctggagttgg cgcgccgcga tcgccgccaa
     1141 aatcgcatcg gcgttcaccc aaagtttgct gccaaatccg ccgccgatga acgggctgag
     1201 caaccgaacg ttctcgaccg gcatcttcaa cgtcctcgcg accgcagccc gcccctgatc
     1261 cagcatttgg ttcgaggtgt gaagaatgag cttgtcgcca tcccacatcg caagcgtcgc
     1321 gtgcggctcc atcatcgcat gactttgcaa cggggtcgta taggtcacat cgagctgcac
     1381 gggcgccgtc gcgaaggcac cggcaaagtc gccgacggtg gtgtcaggtg gagcgcccgc
     1441 accgctcggc gtccgagcat tcgccaggcc atcatgcagc gtataggtgc caggcgattg
     1501 atcgtaggcg acacgcacga ggtaagccgc cgcccgcgcc tgctcaaacg tttcggcaac
     1561 gacaaaggca acaggttcgc cgaaatacga tacctcgggg ccggttaaca ccggatgggc
     1621 ctcatggtgg ttgccggtgc cttgctccgg cgcattgcga tatgtgagca ccaggagtac
     1681 cccgggcgaa cgccgcgcca gccgcgcgtc gacggttttg atccgcccct tgccaattga
     1741 agcctggacg acgtacccgt acgctgtcgc cggcccttgc gatacctcat aggcatagcg
     1801 cgcgccgccg gttactttca gtttgccatc gacacgatcc atcggcttgc cgaccggacc
     1861 ttgctgcgcg tcgacatcga ggacattcgt cccgatgggt gcattcattt ccattggatc
     1921 ggtctccttc aggtccgggt cgcttgcgtc agcaccgcat gcaacgtacg tcgtgcgagc
     1981 gggattttga aatcattgcc gccgtaaccg cgggcgccat tcaacgctgc ggtcgccgcc
     2041 gcatcgaaac cgacggcccc cacaggaacg tcagacagtg cctcgtccgc tcccggaact
     2101 cgccatggcc tgggcgccag gccaccgaac gcaatgcgcg ccgaacggat acgtccacca
     2161 acggcatcga caaccgcggc gacggagacc agagcgaagg cataggacgc ccggtcgcga
     2221 accttgcggt agatctgcct gcccggaggc ggcggaggca ggctaacgga cgtaatgatt
     2281 tcacctgccc gcaaggtggt ttcgatctgt ggcgtggcgc cgggaagccg atacaaatct
     2341 gcaatcggaa tgactcggtt tgcccccgcc gcgtcgaccg tttgcacctt ggcatcgagc
     2401 acccgcatcg cgactgccat gtcggacgga tgcacggcga tgcattggtc gctaccaccg
     2461 agtatggcgt tcattcggtt gaaaccggcc aatgctgcgc agccggaacc gggagtgcgc
     2521 ttgttacacg gctttgtcgt gtcataaaaa tacatgcagc gtgttcgctg cagcaggttg
     2581 ccgcctgtgg tggccttgtt ccgaagctgt gcactggcac ctgcaagcag tgcccggctc
     2641 aggacaccat agcggtcacg cacgcgctga tcggccgcaa gttcgctgtt gcgcaccaat
     2701 gtgccgatcc gaagtccgcc gtccggcgca tcctcgatct tgtcgagcgg cagccgattg
     2761 atatcgacca gttgtgacgg tgtttctatc tgcagcttca tcaggtcgag cagattggtt
     2821 ccgccggcga tgactttcgt tccggatgcc gccgcgattg tcgccgcctg cgccggggag
     2881 ttggcgcgcg cgtaggtaaa ttccttcatg ctggcatctc cgccgcttgc ttgatagccg
     2941 caactatgtt gggataggca ccgcagcgac agatattgcc gctcatgcgt tcgcggatct
     3001 ccgcctcggt caggtccggt cgtggtgttg ccaggtcggc ggtcaccagg ctcggcatgc
     3061 cggcctgatg ctcgctcagc attccggtgg cagaacagat ctgaccggat gtgcagtagc
     3121 cgcattggaa gccgtcgtgc gcgacgaaca aggcctgcag cggctgcagt ttggcgccat
     3181 ccgcgaggcc ctcgattgtc gtgatggcct gaccgtcatg catcacggca agcgtcaggc
     3241 aagagttgat gcgacgtcct tccaacagaa cggtgcaggc tccgcattga ccgtgatcgc
     3301 aacctttctt cgtgccggtc agggccagat gctcacgcag cgtgtccagc agggtagtac
     3361 gcggatcgag ggatacactg tgttcatgac cgttgatcaa caggtcgaca gtcaccgggg
     3421 gagcaggtgg ttgcggattg ggcacgtcag cagcaagcgc tgatgatggt cggcccgaaa
     3481 tcaggacggc cgatgccgcg gttccgactt ccaatacgac ccgacgcgtt accgcgcccg
     3541 gcctgatctc gttctcgtac atgaatgctc ctgtcgtctt ggtctgttgc gttggatacc
     3601 tgccgcaaat tcctgtcgcg gattacgtcc gtgacctgcg gtaccgagag agacaaaccc
     3661 ttggccgtct atgtgatccg tggacctggt tcgaattatc gtcacttcgt aaatgagact
     3721 tatgcaggga acggtgggac cattaacccg agataagtca gccgagcggt ttgctcacca
     3781 gctgataact caggccacta actgtgcatg ataatgtcga tggtttcggc gcttcgacca
     3841 cccattcatt aaacttcatg gcgacgtagc gacgggtagt tccatgaacg tctcatgata
     3901 actcacgatg gttccaagga tttctcagtc gatcgggcga taagatcgta attgcggcgt
     3961 gacagatcag ttccgccggc gcttatcgga gttgcaacca tggtcgagca gagcgaattc
     4021 caccagcgac gcgtctgggg ggaagaagcg atacatcggg ctggcaattt gcggcagctc
     4081 gccctatccc tccaacgatt gctggatagc gggaaaatcg atagcagcga tcgccccaag
     4141 accatcaggc gggccaatgc gctggcgcaa gcctatcgga ccctggatat ggcagacgaa
     4201 ctggatccac attcctgtgt gcagggccta agagatatcg ctgccggcct cgtcgagatt
     4261 ttcggccata ccgtcggttc gctggtatta tctttggata tcgaaccttt gtcgctgaca
     4321 ggagaagggc gccgggcgtt gctgctcgcg gtatccgaac tcgtgatcaa tgcgctgcgc
     4381 cacgcgttca tcgacagaca gaggggtatt cttcaaatca ggctggaaca cgatcaggca
     4441 tgccatgagg gcgcgctgtt cgttgcagat gatggcgtag ggcctggcga tctcacacaa
     4501 ggtgggggcc ggggttgcag catcgttcgc gacctcgccg cagtgctgga cggagacgtg
     4561 gtctggcgcc catcgctgct tctgggcggc accgaggtga tattgagatt tccccttccc
     4621 gcggtcgtag cggtgtccgg cgttatcgcg tcatgtcgtg ttccggccga gccttgagtt
     4681 gtgccttcgc gatctggaat ccagtaaccc acaaaaccaa aggagtaaac ccaatggatc
     4741 accaatatcc cacacaagac gtgccgacgg cacttgccac gcccaccgat ctcggtgcaa
     4801 acgcgacgcg cgatatagca gctgcgctga acggcttgct cgctgatgtc ttcgcgctgt
     4861 atctgaagac caagaatttt cactggcata tgagcgggcc gcatttccgc gactaccacc
     4921 tgatgcttga cgagcaatcc gaccagatct ttgcgatgac cgacgtaatc gccgaacggg
     4981 tgcgcaagat cggccagctt acgatgcact ccatcggcga gatatccagg aatcaacgca
     5041 tcgtggacaa cgacactccg ttcgtcacgc cacaggacat gcttgcagag ctgcgcgagg
     5101 acaacaacga actggttaag cgtatgcggc aagcacacga aatgatcgac gagcagaagg
     5161 acgtggcaac cgctagtctg ctggaggtct tcatcgacga gacggaacgg cgtgcatggt
     5221 tcttgtatga ggcgagccac catacgcccc actcgttata gccgctgccc tctcgcgcgg
     5281 ccgtacaccg atgtgcctcc ttcatggcat ctcatggccc ctgcccgagg gccgatcctg
     5341 actgcaggtg gcagttgaac aatctggctc cgtcttcccg tccggccgcc cagggggtta
     5401 gcggacagaa gtaggaggat caatgccgtt tggttcttcc cgggtgccaa caggcacccc
     5461 gggatggtgg aaagcgatgt cagtaggggc atcggatgtc agtgcaattt aactcgcggg
     5521 ccggcgcgat tcgccagcgc gcggacaaaa ttgcccagca aggcctgcgt tgtaccgccc
     5581 acggcc
//
LOCUS       DATAVD010000877         1833 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2876300, whole genome shotgun sequence.
ACCESSION   DATAVD010000877 DATAVD010000000
VERSION     DATAVD010000877.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2876300"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(648..1196)
                     /locus_tag="VHX39_16840"
     CDS             complement(648..1196)
                     /locus_tag="VHX39_16840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEX3992839.1"
                     /translation="MRRPRPLTRRSALSLAAALPVGLVSQRASASQAELLTMAEFTDE
                     RNTLHHLGELTRPLLLVNLWAAWCPGCLTELPTMQALAARLGADAIDVVLLSHGMNWN
                     RDLAYARATGLPFRHWRLSNRVPETVVAAVFRVQGDRFGLPQSLVLAGSRRELVASYL
                     GSRDWTEPEQLRLARGWLDLAR"
     gene            1373..>1833
                     /locus_tag="VHX39_16845"
     CDS             1373..>1833
                     /locus_tag="VHX39_16845"
                     /inference="COORDINATES: protein motif:HMM:NF021449.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2161 family putative PD-(D/E)XK-type
                     phosphodiesterase"
                     /protein_id="HEX3992840.1"
                     /translation="MSEVSLYPAVKCFLEAAGFDVKGEVNGCDVVAVRGDAPQTLAIV
                     EMKLGFNLELLLQATDRLRAADEVWLAVPATRRGRDRDRRVHRLCRLIGFGLLAVNAA
                     RDRVEVLAEPGPYRPRPDQPRRKRLLSEHARRRGDPSPGGSTRQPVMTAYR"
BASE COUNT          331 a          579 c          588 g          335 t
ORIGIN      
        1 cgacgaatgg acaaacaaac agacgatctc gaaatctttc gacaaatttt gacccagatc
       61 aacgcatctc ccgcctcgca cgactaaatg actgtgccaa ggcctcgcaa ggctcaggcc
      121 gaaagtattt aatcatgtcg attatctgtt ggacggtctt ttatcccggc cgcgcatcgg
      181 tcgcgcacgg cgttacgcgg ttggcacatg cctcggggcg ccacatccgg ccgattgtgc
      241 atcgcgccag cctgatgcac ccccatgtcg cgaaagttgc cgtgacgccg catggttggt
      301 tcaaattggt gtgcaaggta atcccggccg gactggccgg cggcggcgca ctgttggcac
      361 cgcacccctc agtcccgacg cagctgccgg ccccaccacc ggcgttcgtc gtgccagcgc
      421 cggcggtttc acgtgggccg ccgccacttt ggcagttctg gccgcagccg ccatccgcgc
      481 cctacatcgg gccatcgccg ccaatgattt cgaccggatc accgccgcca atcatttcga
      541 caggaacccc gccgacactg gtgccagaac cgtcctcggc ggcaatcctg ttgtgcggcg
      601 tcgccgggct gctgttgctc cggttcagcg tgcaacgatt ggcgtattca tctggccaaa
      661 tccaaccaac cacgagccag acgaagctgc tcgggttcag tccagtcgcg tgagccgaga
      721 taggacgcca caagctctcg ccggctgccg gcaaggacca aggattgcgg cagaccgaag
      781 cggtcgccct gaacgcgaaa cacggcggcg accacggtct ccgggacccg gttcgacagg
      841 cgccaatgtc gaaacggcag gccggtggcg cgcgcatagg ccaggtctcg gttccagttc
      901 atgccgtggc tcagcagcac gacgtcgatc gcgtccgcgc caagccgggc ggccagcgcc
      961 tgcattgtcg gcagttccgt gaggcagccg ggacaccatg ctgcccacag gttgaccagc
     1021 agaagaggac gggtcagctc gcccagatga tggagggtat ttcgttcatc ggtgaattcg
     1081 gccatcgtca gcagctcggc ttgcgaggct gacgcgcgtt gcgaaaccaa accgaccggc
     1141 aacgccgccg ccaggctgag ggcggagcgg cgggtaagcg gtcgcggtcg gcgcatggca
     1201 agcatctccg ctactttacg aatgatcgca gcagttggcg gtatctttgc gtaccttggc
     1261 aagcggtatc tggcatttgg gcacaaccac gcgatggcat gccatgccct cgtatgtgat
     1321 ggcccaacct gcgtgttgct gcgacgcggc gcgctgttgc aggctgcacg ccatgtcaga
     1381 ggtttcgctc tatccggccg tgaaatgctt tttggaagcg gccggcttcg atgtgaaagg
     1441 cgaggtgaat ggttgcgatg tcgtcgcggt acggggcgac gcgccacaaa ccctggcgat
     1501 cgtggagatg aaacttggtt tcaaccttga actgttgctg caggccaccg atcgcctgcg
     1561 tgcggcggat gaggtgtggc ttgccgtgcc ggcgacccgc cgaggacggg accgggatcg
     1621 tcgcgtgcac cggctgtgcc gcctgatcgg cttcggtctg ctggccgtga atgcagcgcg
     1681 cgaccgggtc gaggtgctgg ccgaaccggg tccttaccgt ccgcgtcccg atcagcccag
     1741 acgcaaacgt ttgttgagcg aacatgcgcg gcgaagaggt gatccgtcgc cgggtggatc
     1801 aacccggcag ccggtgatga ctgcgtatcg gca
//
LOCUS       DATAVD010000878         2371 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2876325, whole genome shotgun sequence.
ACCESSION   DATAVD010000878 DATAVD010000000
VERSION     DATAVD010000878.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2876325"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..565)
                     /locus_tag="VHX39_16850"
     CDS             complement(<1..565)
                     /locus_tag="VHX39_16850"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX3992841.1"
                     /translation="MLSKEENEIVTRVGPGTPMGNTLRRYWMPALLASEIPGPDCAPA
                     RVRLLGEDLVAFRDSEGRIGLLDELCPHRLASLYFGRNEECGLRCVYHGWKFDVAGAC
                     VDMMNEPAENDFKHKIHTKAYPTVELGGIIWAYMGPAEKMPPAPKFAWTQAPEARRHV
                     TKVIQDNNWLQALEGGLDTSHAPIMHRA"
     gene            864..1493
                     /locus_tag="VHX39_16855"
     CDS             864..1493
                     /locus_tag="VHX39_16855"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEX3992842.1"
                     /translation="MKFLTDFADQAVVLPVALAVGLVLAAMGWRRGALVWVGVVGATL
                     GAVLVLKLGFMACGPVFTPWGLHSPSGHTAAASVLAGGFVTLLAGSPPAALAIAVLAA
                     AMFGFSRVELGYHSLPEVFIGAAIGIAGAVVLSRLADRPPAMRRPLRVLGVAIVVALL
                     LHGGHLQAEQVIWQFAKGRLDFVPACRAYGSGEAKALTADPASPTRGTN"
     gene            complement(1532..>2371)
                     /locus_tag="VHX39_16860"
     CDS             complement(1532..>2371)
                     /locus_tag="VHX39_16860"
                     /EC_number="2.7.7.13"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate
                     guanylyltransferase/mannose-6-phosphate isomerase"
                     /protein_id="HEX3992843.1"
                     /translation="LWNSGMFVFTARTLLHEMEIHAPEVLSAVQNAVARRHTDLDFIR
                     LAEEPFRACPSISLDYAVAERTSEAAVVPANLGWSDVGSWSALWEPGGKDPAGNVAIG
                     DVVLEASQDCYVRSDGMLTAVIGVKDAVVVVTNDVALVMDREHAQDVKKVVERLKADG
                     RPEAVAHNRTYRPWGFYERLIAGDRFQVKRIVVTPGGQLSLQSHYHRAEHWVVVNGTA
                     RVTRDQESLILRENESIYLPLGCMHRLENPGRIPLTLIEVQSGAYLGEDDIVRVDDSY
                     GRA"
BASE COUNT          379 a          764 c          757 g          471 t
ORIGIN      
        1 gtgcccggtg catgatcggc gcatgcgagg tgtcgaggcc gccttccagc gcttgcagcc
       61 aattgttgtc ctgaatcacc ttggtcacgt ggcgccgcgc ttccggcgcc tgggtccagg
      121 caaacttcgg cgcaggcggc attttctcgg ccgggcccat gtaagcccag atgatgccgc
      181 ccagttcgac ggtgggatag gccttggtat ggattttgtg tttgaagtcg ttttcggccg
      241 gctcgttcat catgtcgacg caggctccgg caacgtcgaa cttccagccg tgatagacgc
      301 agcgcagccc gcattcctca ttccgcccga aatacaggct ggcgaggcgg tgcggacata
      361 attcgtccag caggccaatg cggccttcgc tgtcacggaa agcgaccagg tcctcgccca
      421 aaaggcggac ccgggcgggg gcacaatccg gtccggggat ttcgctggcg agcaacgccg
      481 gcatccaata gcggcgtagc gtgttgccca tcggcgtccc gggtccgacg cgggtgacga
      541 tctcgttctc ttctttcgac agcatcggcg tggctcctta cttccctgtg ggggcttccg
      601 gttggtccgg cagttcgggg atcacgctaa cgccgcgccg ggtccgaggt ccaggggccg
      661 aagccgagac cacgcggttt tttgtcacga caccctgcat tttgccacga atgcctgggc
      721 tcagtcgaac ctcccggcgt ctggtcaccg atcccgcccg cattcaggca catggatttc
      781 cgggtaacca tcgccaggca gccggagagc attgggaatt tggtgcaacc gccgctccat
      841 tcgtggtaga gagcgaccgt aacatgaaat tcttaacaga ttttgccgac caggcggtcg
      901 tgcttcccgt ggctttggcc gttggcctgg tgttggccgc aatgggctgg cgtcgcggcg
      961 cgctggtttg ggtcggtgtt gtcggggcca ccctgggtgc cgtcctggtg ctgaagttgg
     1021 gcttcatggc gtgtggtccg gtgtttaccc catggggcct gcactcaccg agtggccata
     1081 ccgctgcggc ctcggtcctg gcgggcggtt tcgtcaccct gctggctggc agcccgccgg
     1141 cagcgctggc gattgccgtg ctggccgccg caatgttcgg attctcccgc gtggagctgg
     1201 gatatcactc gctgccggag gtcttcatcg gggccgcgat cggcattgcc ggcgcagtcg
     1261 tgctatctcg tctcgcagac cgccctccgg ccatgcggcg tccgctgcgg gtactgggtg
     1321 tcgcgatcgt ggtggccttg ctgcttcacg gtgggcattt gcaggccgag caggtgatct
     1381 ggcagttcgc gaaaggtcgc ctggatttcg ttcccgcctg tcgcgcctat gggagcggtg
     1441 aagctaaggc gctgacggct gacccggcct cccccaccag gggcaccaac taaccaactc
     1501 cggcaggtaa ccgggcaacg cggtcagccg ttcacgcccg tccgtaactg tcatcgaccc
     1561 ggacgatatc gtcctcgccg agataggcac cagactgcac ctcgatcagg gtcaatggaa
     1621 tccggccggg attttccagc cggtgcatgc agcccagtgg cagatagatg ctctcgtttt
     1681 cgcggaggat gaggctttcc tgatcgcggg taacgcgagc tgtgccattc accacgaccc
     1741 agtgctcggc acgatggtag tgactttgca gcgacagctg gccgcccggc gtgacgacga
     1801 tgcgtttgac ctggaagcgg tcgccggcga tcaggcgctc ataaaagccc caggggcggt
     1861 aggtgcggtt atgcgccacc gcttccggcc ggccgtcggc tttcaggcgc tccaccacct
     1921 tcttcacgtc ctgcgcatgt tcgcggtcca tcaccaaagc gacatcgttg gtgaccacca
     1981 ccacggcgtc cttgaccccg atgaccgcgg tcaacatccc gtcgctgcgc acatagcaat
     2041 cctgcgacgc ttccagcacc acatcgccga tcgcgacatt gccggccgga tctttgccgc
     2101 cgggttccca gagcgcgctc caactaccga cgtcagacca gccaagattg gcaggtacca
     2161 cggccgcttc agaggtccgc tcggccaccg cgtagtccag gctgatcgag gggcaggcac
     2221 ggaacggctc ctcggcgagg cgaatgaaat cgaggtcggt atggcgccgc gcgacggcat
     2281 tctgcaccgc cgacaacacc tccggcgcgt ggatttccat ctcatgcagc aaggtccgcg
     2341 cggtgaacac gaacatgccg gagttccaca g
//
LOCUS       DATAVD010000879         3329 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3621972, whole genome shotgun sequence.
ACCESSION   DATAVD010000879 DATAVD010000000
VERSION     DATAVD010000879.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3329
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3621972"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            31..1944
                     /gene="cyoB"
                     /locus_tag="VHX39_16865"
     CDS             31..1944
                     /gene="cyoB"
                     /locus_tag="VHX39_16865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004272288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009486 - cytochrome bo3 ubiquinol oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0015990 - electron transport coupled proton
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit I"
                     /protein_id="HEX3992844.1"
                     /translation="MVIAGGLAWVVLKGWFPYLWREWITSVDHKRIGVMYTFLAMVML
                     LRGFTDAIMMRSQQALAYRAPGYLPPEHYDQIFSAHGTLMIFFVAMPFVIGLMNFAVP
                     LQLGVRDVAFPTLNSVGFWLTATGALLVNLSLVVGEFARTGWLPYPPLSELAYSPGVG
                     VDYYLWSLEISGAGTLLSGVNLVTTVLKLHAPGMTYLRMPMFCWTTLAANLLIVAAFP
                     ILTATLAMLLLDRYLGFHFFTNTAGGNVMMFMNLIWAWGHPEVYILILPAFGVFSEVI
                     STFSRKPLFGYRSMVMATMAICILAFMVWLHHFFTMGAGADVNAIFGIATMIIAVPTG
                     VKVFNWLFTMFGGRIVFATPILWSIGFMITFVIGGMTGVLLAVPPADFVLHNSLFLVA
                     HFHNVIIGGVLFGSFAGYTYWFPKAFGFRLHEGLGKAAFWCWFVGFYLAFMPLYVLGL
                     MGMTRRMQHYDVPAWHPWLLVAAGGAVVILAGIILQIAQLAVSIRHRDALRDDTGDPW
                     NARSLEWSTPSPPPVFNFPVLPQVEGLDAWWTLKQAPPTAESAYEDIEMPRNSPTGFI
                     CAFFATIMGFALIWHIWWMVAVALVGAYVTFVVFAWRDRDEYTIPADTVARFDRAARD
                     TRDAALTRKGSLS"
     gene            1941..2573
                     /gene="cyoC"
                     /locus_tag="VHX39_16870"
     CDS             1941..2573
                     /gene="cyoC"
                     /locus_tag="VHX39_16870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006559938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009486 - cytochrome bo3 ubiquinol oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0015990 - electron transport coupled proton
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit III"
                     /protein_id="HEX3992845.1"
                     /translation="MSAAHAAAVPATPHHHRPPPGGSASKRIVVGYGFWIFLLSDIIM
                     FSAFFATYAVLVDATAGGPNGHDLFDLRSVGTETACLLLSSFTCGLASIGARTRNGLL
                     FYGAMAVTFLLGIGFLGLEMREFAGMVARGDGPSRSAFLSAFFTLVGCHGLHVTAGLL
                     WLLTMMAQVYAKGYRPDILRRMLCFGLFWHTLDIIWVALFSVVYLMGVAR"
     gene            2570..2944
                     /gene="cyoD"
                     /locus_tag="VHX39_16875"
     CDS             2570..2944
                     /gene="cyoD"
                     /locus_tag="VHX39_16875"
                     /inference="COORDINATES: protein motif:HMM:TIGR02847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009486 - cytochrome bo3 ubiquinol oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0015990 - electron transport coupled proton
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit IV"
                     /protein_id="HEX3992846.1"
                     /translation="MSHAEPDTAPGDEAQDEHEAGVGTYLIGLGLAVLLTAVSFFISG
                     TSLVWGPSIPVALVVLAIAQMGVHLVFFLHMTTGPDNTNNAMALAFGVLIVLLLLTGS
                     LWIMDHLNHNMMPMDQIMRMQR"
     gene            complement(3042..>3329)
                     /locus_tag="VHX39_16880"
     CDS             complement(3042..>3329)
                     /locus_tag="VHX39_16880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin-dependent oxidoreductase"
                     /protein_id="HEX3992847.1"
                     /translation="GSNGASQAILDARCLCDLLGRYSVPEALGAYEADRLPATAGVVR
                     SNRLGGPERVIDLVAARAPEGFGRVADVASEAELGDIVKGYARVAGFSVVR"
BASE COUNT          497 a         1229 c          930 g          673 t
ORIGIN      
        1 atcccgctgt tcgccgccgc cctggttggc gtggtgatcg ccggcggtct cgcctgggtc
       61 gtcctgaaag gctggttccc ctatctgtgg cgcgagtgga tcaccagcgt cgaccacaag
      121 cgcatcggcg tcatgtacac cttcctcgcc atggtgatgc tgctgcgagg cttcaccgac
      181 gcaatcatga tgcgctccca gcaggcgctg gcataccgag cgcccggcta cctgccgccc
      241 gaacactacg accagatctt ctccgcccac ggcacgctga tgatcttctt cgtcgccatg
      301 ccgttcgtca tcgggctgat gaacttcgcc gtgccgctgc agctcggcgt gcgggacgtc
      361 gccttcccga cgctcaattc cgtcggcttc tggctcaccg ccaccggcgc gctgctggtc
      421 aacctctccc tggtcgtcgg agaattcgcc cgcaccggct ggctgcctta tccgccgctg
      481 tcggaactgg cctactcgcc cggcgtcggc gtcgactact atctgtggtc gctggagatt
      541 tccggcgccg gcacattgct gtccggcgtc aacctcgtca cgaccgtgct gaagctgcac
      601 gcccccggca tgacctattt gcgcatgccg atgttctgtt ggacgacatt ggctgccaac
      661 ctgctgatcg tcgccgcgtt ccccatcctg accgccacgt tggcgatgct gctgctggac
      721 cgctacctcg ggttccattt ctttaccaac acggccggcg gcaacgtgat gatgttcatg
      781 aacctcatct gggcctgggg ccacccggag gtctacatcc taatcctgcc ggcgttcggc
      841 gtgttctccg aggtcatctc gacattttcc cgcaagccgc tgttcggcta ccgctccatg
      901 gtgatggcga cgatggcgat ctgcatcctg gcgttcatgg tgtggctgca ccacttcttc
      961 accatgggtg cgggtgccga cgtcaacgcg atcttcggca tcgccacgat gatcatcgcc
     1021 gtacccaccg gcgtgaaagt gttcaactgg ctgttcacca tgttcggcgg ccgcatcgtt
     1081 ttcgccacgc cgatcctgtg gtcgatcggc ttcatgatca ccttcgtcat cggtggcatg
     1141 accggcgtcc tgctggccgt accgccggcc gatttcgtgc tgcacaacag tctgttcctc
     1201 gtcgcccact tccacaacgt gattatcggc ggcgtgctgt tcggcagctt cgccggctac
     1261 acctactggt tccccaaggc attcggcttc cgcctgcatg aaggcctggg caaggccgcc
     1321 ttctggtgct ggttcgtcgg cttctacctc gcctttatgc cgctctacgt cctcggcctg
     1381 atgggcatga cccgccgcat gcagcactac gacgtccccg cctggcaccc ctggctgctg
     1441 gtcgccgccg gcggcgccgt cgtcatcctg gccggtatca tcctgcagat cgctcaactc
     1501 gcagtcagca tccgccatcg cgacgctttg cgcgacgaca ccggagaccc gtggaacgcc
     1561 cgctccctgg aatggtcgac gccgtcgccg ccgcccgtct tcaacttccc cgtcctgcca
     1621 caggtcgagg gcctcgacgc ctggtggacc ctgaagcaag ccccgcccac cgctgaatcc
     1681 gcctacgaag acatcgagat gccgcgcaac agccccaccg gtttcatctg cgccttcttc
     1741 gccaccatca tgggcttcgc tctgatctgg cacatctggt ggatggtggc cgtcgccctg
     1801 gttggcgcct acgtcacctt cgtcgtcttc gcctggcgcg accgagatga atataccatc
     1861 ccggccgaca ccgtcgcccg cttcgaccgc gccgcccgag acacccgcga cgccgccctg
     1921 acccgcaagg ggtcgctatc atgagcgccg cccacgccgc cgccgtcccc gcaaccccac
     1981 accaccatcg acccccgccc ggtggatcgg cctccaagcg catcgtcgtg ggctacggat
     2041 tctggatttt cctgctcagc gacatcatca tgttctccgc cttcttcgcg acctacgcgg
     2101 tgctggtgga cgccaccgcc ggcgggccga acggccacga cctgttcgac ctgcgcagcg
     2161 tcgggaccga gaccgcctgc ctgctgctgt ccagcttcac ctgtggcctc gccagcatcg
     2221 gcgcccgcac gcgcaacggc ctgttgttct atggcgctat ggccgtaacc ttcctcctcg
     2281 gcatcggctt tcttgggctg gaaatgcggg agtttgccgg catggtcgcc cgcggcgacg
     2341 gcccctcgcg cagcgccttc ctgtcggcgt tcttcaccct ggtcggctgc cacggcctgc
     2401 acgtcaccgc cggtctgcta tggctgctga cgatgatggc gcaggtctac gccaagggat
     2461 accgccccga catcctgcgt cgcatgctgt gcttcggcct gttctggcat acgctggata
     2521 tcatctgggt cgccctgttc tccgtggtct acctgatggg agtcgcccga tgagccacgc
     2581 cgaacccgat accgcccccg gcgacgaggc ccaggacgaa cacgaagccg gcgtcggcac
     2641 ttacctgatc ggcctcggcc tcgcggtgct gctgaccgcg gtgtcattct tcatctccgg
     2701 cacctcgctg gtctggggtc ccagcatccc ggtcgccctg gtggtgctgg cgatcgccca
     2761 gatgggtgtc caccttgtct tcttcctgca tatgacgacc ggcccggaca acaccaacaa
     2821 cgccatggcg ctggcattcg gtgtgctgat cgtgctgctt ctgctgaccg ggtcgctgtg
     2881 gatcatggat catctgaatc acaacatgat gccgatggat cagattatgc ggatgcagcg
     2941 gtgacggtca gactgatcgc ctggccgaag gtcaaaagac cagaagcacg cgaacatagt
     3001 tttccacagc aagattaggt ccaacctgcc cagatcccgc cttaccgcac cacactgaac
     3061 ccagccaccc gcgcataccc cttgacgata tcccccagtt ccgcctcgct ggccacatcc
     3121 gccacccgcc caaacccctc cggggcccga gcggcaacca ggtcaatcac ccgttccggc
     3181 ccgcccagcc ggttggatcg caccacgccg gccgtcgccg gcagccgatc cgcctcatag
     3241 gcacccagcg cttccggcac cgaataccgc cccagcagat cgcacaggca ccgcgcatcc
     3301 aggatcgcct gcgacgcgcc gttcgaccc
//
LOCUS       DATAVD010000880         2146 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1759190, whole genome shotgun sequence.
ACCESSION   DATAVD010000880 DATAVD010000000
VERSION     DATAVD010000880.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2146
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1759190"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..852)
                     /locus_tag="VHX39_16885"
     CDS             complement(<1..852)
                     /locus_tag="VHX39_16885"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEX3992848.1"
                     /translation="MLHRALIVALSLCAFAPRAFAADYPDHAIRMIVPFAAGGGTDVL
                     ARIIADSLNKKWGQPVIVENQPGASGAIGTRAAMKAAPDGYTLLMASTGALMAVSATA
                     GNAGPFDVNKYLSPIVIGAAPPYLLVASPKLPVSTTADLIRYAKAKPEGLTFGSSGVG
                     AASHLSGLLFASATGIKLLHVPYKGTEPAVTDLLGGRIDIMFAPGPVVQQFVQSGQLK
                     ALGVTDTQRSKFYPEVPTVADAVPGYEAVGWFGLLAPPNTPPAIVKQINEVIVAAMQT
                     KGFRDHLA"
     gene            complement(901..1749)
                     /locus_tag="VHX39_16890"
     CDS             complement(901..1749)
                     /locus_tag="VHX39_16890"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3992849.1"
                     /translation="MTASSPAKTCQVDVEDIEFGRAGDIPLIARLYRPRGVSRFPGIV
                     EVHGGAWTGGDRLNNVVIHNAVAAAGTAVLALEFRLAPAAPYPAGIADVNLGIRWLKA
                     NIARLGGDARKVGGLGTSSGGHQLLLNVLRPNDPRYTALKLSNAAHVDASLDYVVVCW
                     PISDPVARYRMARETGNERLVKNHHAFFGDEATMVEANPQAILESGVASKLPPALLIQ
                     GTADANVTPDMADKFAAAYAEAGGKIVLRKFEGEPHTFVSQNPTGPASVEALRLITEF
                     IAGQTR"
     gene            complement(1797..>2146)
                     /locus_tag="VHX39_16895"
     CDS             complement(1797..>2146)
                     /locus_tag="VHX39_16895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992850.1"
                     /translation="MMRWFFKDRVPVIQINERGRFMGFHDPGIAQIKDHPGIYVARVP
                     DNAIPIWDSINASREPLERVDRVWRGRVMDTYVLEKLTGWTPELSPPADSPLFRWRVL
                     AGHFGDVIPVEVG"
BASE COUNT          418 a          684 c          648 g          396 t
ORIGIN      
        1 tgccaaatga tcgcgaaagc ccttcgtctg catcgcagcg acaatgacct cgttgatctg
       61 cttgacgatc gccggcggcg tattcggcgg cgccagcagc ccgaaccagc cgaccgcttc
      121 ataccccggg acagcgtccg caacggtcgg cacctccgga tagaatttcg agcgttgggt
      181 atctgtcact cccagcgcct tcagttgccc ggactgaacg aattgctgca ccaccgggcc
      241 cggcgcgaac atgatgtcga tccggccgcc gagcagatcg gtgactgcgg gctcggtgcc
      301 cttgtaaggc acgtgcagca gtttgatgcc ggtcgcgctc gcgaacaaca ggccagacag
      361 atgcgacgcg gctcccacgc cggaggaacc gaacgtcagc ccttccggtt ttgccttggc
      421 atagcggatc aagtccgccg tcgtgcttac cggcaatttc gggctggcaa ccagcagata
      481 aggcggcgcg gcgccgatca cgatcgggct gagatatttg ttgacgtcga acgggccagc
      541 attgcccgcg gtggcagaaa cggccatcag cgcgccggtc gacgccatca acagcgtgta
      601 gccatccggc gcggccttca tcgccgcccg cgtcccgatc gcgccagaag cgcccggctg
      661 gttttccacg atgaccggct ggccccactt cttgttcagg ctgtcggcga tgatgcgcgc
      721 cagcacgtcg gtgccgccac cggccgcaaa cggaacgatc atccggatcg catgatcagg
      781 atagtcggcg gcgaaagccc gcggtgcgaa cgcacacaac gatagcgcca cgatgagggc
      841 ccgatgcagc atggcaactc tccggcttga atcgaggatc cgtttgaatg cgaaggtcat
      901 ctatctggtc tgacctgcga tgaattccgt gatcaggcgc agcgcctcga cggaagccgg
      961 accagtcggg ttctgcgaaa cgaaggtatg aggctcgccc tcgaacttcc gcagcacgat
     1021 ttttccgcca gcctcggcgt aagcggcagc gaacttgtcc gccatatccg gcgtgacatt
     1081 ggcgtccgcc gtgccctgga tcagcaacgc cggtggcaat tttgatgcta cgccactttc
     1141 tagaatcgct tgcggattgg cttccaccat cgttgcttca tcaccgaaga acgcgtgatg
     1201 atttttgacc agccgctcat tgccggtttc tctcgccatg cggtaacgcg cgacgggatc
     1261 ggagatcggc cagcacacca cgacatagtc aaggctggca tcgacgtgag cagcattcga
     1321 aagcttcagc gccgtgtatc gggggtcgtt cggtcgcaac acgttcaaca gcagctgatg
     1381 gccgccgctc gaggtgccga ggccgccgac cttgcgggcg tcgccgccca atcgcgcaat
     1441 attggctttc agccagcgga tgccgagatt gacgtcagcg atgcccgctg gataaggcgc
     1501 ggccggagcg agccggaatt ccagcgccag caccgccgtg ccggcggccg caaccgcgtt
     1561 atggatcacg acattgttca gccggtcgcc gccggtccag gcgccgccgt gaacctcgac
     1621 gataccgggg aaccgcgaga cgccccgcgg gcgataaaga cgcgcaatca atggaatgtc
     1681 gcccgcccgg ccaaattcga tgtcttcgac atccacctga caggtttttg ctgggctgct
     1741 ggcggtcatg cggaatactc tttcggtatc ttggcatggt tcaagtagcg cctaattcag
     1801 cccacctcaa ccggtattac gtcgccgaaa tggcccgcca gcacgcgcca gcgaaacagc
     1861 ggcgagtccg caggcggcga aagttcgggt gtccagccgg tcaatttctc cagcacatag
     1921 gtgtccatga cccgtccacg ccagacgcgg tcgactcgtt cgagaggctc tcgggacgca
     1981 ttgatggagt cccagatcgg aatggcattg tcgggcacgc gcgcgacata aattcctgga
     2041 tggtccttga tctgtgcgat gcccggatca tgaaatccca tgaagcgacc ccgttcgttg
     2101 atctggatca ccggcacgcg gtccttgaaa aaccagcgca tcatgg
//
LOCUS       DATAVD010000881         4081 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_455984, whole genome shotgun sequence.
ACCESSION   DATAVD010000881 DATAVD010000000
VERSION     DATAVD010000881.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4081
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_455984"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            773..1210
                     /locus_tag="VHX39_16900"
     CDS             773..1210
                     /locus_tag="VHX39_16900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992851.1"
                     /translation="MSDDFYDHRIKHLIKVLITRSEDHDESSRLKWEAVEPYGYELSL
                     ARSSLRIAADEEDGDWYPYIFSLRGESGNEIEEVYASSDSDDEFELHKLFKAASRSHR
                     GASEKLAEVFRELGIADPPRVSESSSSTSAGRSGSKSQSEPPA"
     gene            1956..2639
                     /locus_tag="VHX39_16905"
     CDS             1956..2639
                     /locus_tag="VHX39_16905"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX3992852.1"
                     /translation="MVTPSEEPGNARLERREQILRAARAAIEEFGPEALTGDIAKRAG
                     LARPNVYRHFSSKDNLDLAVARSTTQELLAAIREQLDLSGTPLDVIRAPIKAQVIWAD
                     CHPNLYRFLVSRGMYQFLAGQGSKRRSKQRGAEHSGFASELTAVAARYFPRYTENPYA
                     AEATVIGVAALIDASVLHWLDRRTELRDELIGRLTDLAWLVTDHHLCKFGVQLDPARP
                     LPQTWQTPS"
     gene            3203..3529
                     /locus_tag="VHX39_16910"
     CDS             3203..3529
                     /locus_tag="VHX39_16910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992853.1"
                     /translation="MGLFKKKDKAGEVAGDVTVYYSTPFGDTKDGQQKLFLLGRDGLS
                     FFPVFYSKESMQAFYERMNRAAYMIIEGSIESVKDTLRSIEPMKNTGIAIEPFSEHPV
                     EIMPDS"
     gene            3648..>4081
                     /locus_tag="VHX39_16915"
     CDS             3648..>4081
                     /locus_tag="VHX39_16915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992854.1"
                     /translation="MGIAGGARPGQYRPPITPFAGWVADERTNRLRPLETAPHIGAFA
                     PPGTGKTRKWLAQSAVLWPGPALVSSSKDDLMQMVASRRYGPSALLDLRPIAAPYYPG
                     DCIAHRFDPTALIATLADAMAVAETLLSTSAVALSGTAFRGGS"
BASE COUNT          795 a         1235 c         1270 g          781 t
ORIGIN      
        1 gacgtgcagc aatgggaata ccaattcgac accggcatgg atggcgggac cattgttgct
       61 gccaagtgag tggccgcaga aaggatctgc gccgctggcg ctttggattc tgcgccaggg
      121 ctgatgatgc aaggcagaaa gccgtctgcg gtgacgcgtg ctacgcctgg aggtccgaac
      181 ctagtgcagg tcgcgcagca gcgctgtctc ggcacatcgg aacgtcatga aaccggctga
      241 cgccttggcc aatttcgtcg gccgcacgcc gctaggcagc gtctgcgatc gatattggcg
      301 agcaggcccc cggcgataac ttggaatgcg gcgtcaatgg tattggtgat actctgtgta
      361 tcagcgccat cggctagtgg cctgtcgtga gtgggcggtt tgtgccaagg ggccgtagcg
      421 aggccgatgt tctagatagt gaggagatga atcagtagcc gaacggttcg gggcgacacg
      481 aacggtatcc tcgctcatcc gaccgttcat gcagcttgaa gacatgctcg ctcaagccgt
      541 aaacaggatc agcggcgtcc acaacgcacc cgctgcgcat gcgcagtcgg cgagccgcgc
      601 tgtgccataa gctagttcga acaaagccct atcagaaaca ataccgagga ggcagctgtc
      661 gatcatcgaa ggtatcgatt gcccgctcgc ggcgtatctg ctcgcgcggc gccgttagtg
      721 acgtaagtca ggccttcatg ctctgtccgc cgctcgttat aaaggagccg aagtgagcga
      781 cgatttttac gaccaccgca tcaagcatct gatcaaagtg ctgatcaccc gcagcgagga
      841 ccacgacgag tccagtcggc tgaagtggga ggccgtcgag ccttatggct acgaactctc
      901 cctggcacga tccagtctgc gcatcgcagc cgacgaggag gatggcgact ggtatcccta
      961 cattttctcg ttgcgcggcg agagcggcaa tgaaatcgaa gaggtatacg cgtcgtcaga
     1021 tagcgacgac gagtttgagc ttcacaagtt atttaaagcg gcctcgcgga gtcatcgggg
     1081 cgccagtgag aagttggcgg aagtctttcg agaacttggc attgccgatc cgccacgtgt
     1141 gtcggagtcg tcgagcagca cttccgcggg ccgctctggc agcaaatctc agagcgagcc
     1201 gccggcatag cgcggccgtc ggcgcgaaaa attggacatt gccgatgggt cggtgctcac
     1261 tgtcgacgag ctacagcagc gatctgacag gcataaccgc catgagtggg tgttcgcgtc
     1321 catgaggcag cgagcgacac acgatgcggg atagctgaag ggatgcggca tagccaggcc
     1381 cgcagatggg gcttgtgccg tcgatgacac cgaggatcgc agcacaagcg atgacgcgcg
     1441 aaagtcttcg ggtctcgctg ctttacgttg gtccccgcgt tcatgcttcg ggcccgcgcc
     1501 tcggtgtcgg cggcggttgc gagtggtcga cgcgacgttg gtcgctacga cccaataccg
     1561 tgtcgctaag ccgcgttgtt ccatgtggtc cactacgccc aaacctcgct gccgatcagt
     1621 gatttgtcag cggcgcatcc gattcatctt ggcggacacc cttcaggcgc acgcccgctc
     1681 atagcattca gcaaagactg acaaactaac ttgtcggcat cgtgcgacag gtcgacctgc
     1741 catgctcgga cacggtgagt cgccgggcaa caagtccgtt tgctgaagcc agcaaataac
     1801 ccgtcgtggg tgcaaaaccg gcatccctcg tccccgatca gagtattgat cagcgacagg
     1861 tctcgtgtgt cgattatccg tcggttgctg gcaataatgg tacagtctct aatttgtggc
     1921 gatacatatt gtatcagtag tgatggcttg agctgatggt aacgccatca gaagaacctg
     1981 gaaatgcacg tctagagcgg cgcgaacaga ttctccgcgc cgctcgggcc gccattgagg
     2041 aattcggtcc cgaggcgctg actggagaca tcgccaagcg cgccgggttg gcccgcccga
     2101 acgtgtaccg gcacttctcc agcaaagaca acctcgacct ggcggtggcc cgcagcacca
     2161 ctcaggagct gctggcagcg atacgggaac agctggatct gtcgggtaca ccgctggacg
     2221 tgatccgcgc acccatcaaa gcccaagtca tctgggccga ttgccatccc aacctgtatc
     2281 gattcctggt cagccgcggc atgtatcagt tcctggccgg ccagggaagc aagcgacgtt
     2341 caaagcagcg cggagctgag cacagcgggt tcgcgagcga gctcaccgcg gtcgcggcac
     2401 gatacttccc gcggtacaca gaaaacccct atgcggccga ggccacggtc atcggagttg
     2461 ccgccctcat cgacgcttca gtcctgcact ggctggaccg gcgaaccgag ctgcgcgacg
     2521 aattgatcgg tcggcttacc gatctggcct ggctggtcac cgaccaccac ctgtgcaagt
     2581 tcggtgttca gctcgatcct gccaggccat tgccgcaaac ttggcagaca cctagctgat
     2641 gcgatagtcg tgcactcggc gctggcctcg gccacagtcg gtcgaagtgg cggcgctact
     2701 tcttgccgac ccacgcttct ccggcgaact cgtgtccatc ccctccgcag tttccgaata
     2761 acctgggcgt ggtggcttca ccggtatcga aacgaagggg gcccgtcggt gacgaacggt
     2821 ccagagcgcg ggcgccagaa accaaccggg cgccgggccc gccgccagga atgtggcggc
     2881 cgctgggggg accgtcgtca ccgggcccgt ggaacccgta cggccctccg tgggcactcg
     2941 taccgccggc ggcgccgcgg cgatcgcgcc gcaacctggt agtcgggccg tgctgggtgc
     3001 ggcggtgctt gttgccgacg ttgtcgcggc agcggttggg ctgtcgtcgg ataaatcaag
     3061 cacgacgccg gcgacaacca tcacccttac cgccccactt cgagggatcg cgacagggca
     3121 ccggtaatga aaacttgtac ctcctcctgc tgagctttgt cgcccaccgg tgcgccccgc
     3181 gcaaagcaga acggagatga tcgtgggctt attcaaaaag aaagataagg ccggagaagt
     3241 tgccggtgac gtcaccgtct attactccac cccgttcggc gacaccaagg acggccaaca
     3301 aaagctcttc ctgcttggac gcgacggttt gtcgttcttc cctgtgttct acagcaagga
     3361 gtcgatgcaa gcgttctacg agcggatgaa tcgcgccgcg tacatgatca tcgagggaag
     3421 tatcgagtct gttaaggaca ccctgcgctc catcgagccg atgaaaaaca cgggaattgc
     3481 cattgaaccc ttcagcgagc atccggtcga gatcatgccc gactcttgac gattgggcgc
     3541 cgatcatgac ctcgcgtttt gtggttccta accgccgcgg aacccagttt gggccggcac
     3601 cgaattttgt gcgggaacca tcctttcggc gaccttaggg tcgatgcatg ggcatcgctg
     3661 gcggtgcgcg cccgggccaa tatcggcctc ctatcacccc gttcgccggg tgggtcgctg
     3721 atgagcggac caatcgcctg cgcccgctgg aaaccgcacc gcatatcggt gctttcgctc
     3781 cgccgggaac cgggaagacc cgcaaatggc tggctcagtc cgcggtgctg tggccgggac
     3841 cggccttggt gtcctccagc aaggacgacc tgatgcagat ggtggcttcg cggcgctacg
     3901 ggccgtcggc actgctggat ctgcgaccca tcgctgcgcc ctactacccg ggcgactgca
     3961 tcgcacaccg tttcgacccg actgcgctga tcgccacatt ggccgatgcg atggcggtcg
     4021 cggagacgtt gctgtctacc tcggcggtgg cgttgtcggg caccgccttt cgcggtggat
     4081 c
//
LOCUS       DATAVD010000882         3345 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_456101, whole genome shotgun sequence.
ACCESSION   DATAVD010000882 DATAVD010000000
VERSION     DATAVD010000882.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3345
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456101"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(83..292)
                     /locus_tag="VHX39_16920"
     CDS             complement(83..292)
                     /locus_tag="VHX39_16920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010510829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaB family protein"
                     /protein_id="HEX3992855.1"
                     /translation="MPHAVNDDLPPSVTNHLPPHAQDIYREAFNHAWQRHPADEATPH
                     RIAWAAVKRSYRKAGDEWVRRDEWV"
     gene            complement(383..637)
                     /locus_tag="VHX39_16925"
     CDS             complement(383..637)
                     /locus_tag="VHX39_16925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992856.1"
                     /translation="MPVPGLEIRAHDPRPLDWGHVVDAAAARLEESWVRPDSTGHMLA
                     SGLAEELAATLCAYGMVAMEVDHMHDHEGANPAVQQPLAK"
     gene            complement(1010..1762)
                     /locus_tag="VHX39_16930"
     CDS             complement(1010..1762)
                     /locus_tag="VHX39_16930"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3992857.1"
                     /translation="MSATSQAIDPRSGVTMNYPIGMHPATGGMPKPDAPQARLAKVQI
                     LAALESRATTVQAERDDEIVAQEDPANWCYLVLSGCVRTVRLMEDGRRQVGEFLFAGD
                     LFGWEALDNHDFGAEAVTPVTLRRYARRDLERLADQDRDVARRLRELSSSRLRSGREH
                     MVLLGRKTASERIASFLLEMAARGNADAKSTIELPMSRSDMGDYLGLTIETVCRRLTR
                     LRLDGTIAINGTKIAIRNHAALGEAGCERVVH"
     gene            1871..2485
                     /gene="fixJ"
                     /locus_tag="VHX39_16935"
     CDS             1871..2485
                     /gene="fixJ"
                     /locus_tag="VHX39_16935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0045893 - positive regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator FixJ"
                     /protein_id="HEX3992858.1"
                     /translation="MSATATIHVVDDDAAMRDSLRMLLEAAGFAVRTFDSASAFLGSE
                     PAGLGCVLTDVRMPEIDGLALLVRLREQGVHLPVIVMTGQGDIAIAVQAMKAGAIDFL
                     EKPFDDATLVEAVGKAQTQSQKQQEAVQASAEAASRLATLTPREREVFDLLVTGLPNK
                     AIANTLGASPRTIEVHRARVFEKLKAHNLPDLVRLLLAAESPPA"
     gene            complement(2517..2882)
                     /locus_tag="VHX39_16940"
     CDS             complement(2517..2882)
                     /locus_tag="VHX39_16940"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3992859.1"
                     /translation="MNDNHSGIVGIVDDDPAVLDSLKFLLEVIGYQVSTYASAGAFLG
                     DGATDPTCLIIDQHMPGMTGLELAQTLRNDGDSIPILLITGSPSPAIVARAAQLGIVN
                     VLEKPPEEADLLNFVSTYI"
     gene            complement(3007..>3345)
                     /locus_tag="VHX39_16945"
     CDS             complement(3007..>3345)
                     /locus_tag="VHX39_16945"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3992860.1"
                     /translation="IQQVLINLMRNAVEAMATVARRELTVSASRIGDAVEIRVADTGP
                     GLPESVRTRLFQPFVTTKPDGMGVGLSVCRAIVEAHGGELHGGDAAGGGTVFRFTVPR
                     FAKPAADDAA"
BASE COUNT          643 a         1062 c          995 g          645 t
ORIGIN      
        1 ccgttcggct tcggtcgatg ctttgttgca accgtcgcgc cgccgcagcg gtctgcgcct
       61 gcgcaacagc tgagcccgct acctacaccc attcatcgcg ccgtacccat tcatcgccgg
      121 ccttccggta actgcgtttg actgcggccc aggcaatgcg atgcggggtg gcctcgtctg
      181 cggggtggcg ctgccaggcg tgattgaacg cctcccggta gatatcctgc gcgtgcggcg
      241 gcagatggtt tgtgacggac ggcggcagat catcgttcac ggcatggggc atgactcgtc
      301 tctgctatcg ccgccgcaca gaaagcggaa taagcgcaca ggcacggcgc ggtatcgcgt
      361 gaaacgtctg agcagcgcag ctttatttgg ccagcggttg ctgaacggcg ggatttgcac
      421 cttcatgatc gtgcatatgg tcgacctcca tggcgaccat gccatacgca cacaacgtcg
      481 ccgccaattc ttcggcaagc ccggaggcga gcatgtgccc ggtactgtcg ggccgtaccc
      541 acgattcctc caatcttgcg gcagcggcat ccaccacgtg accccaatcg aggggacgtg
      601 gatcatgcgc acgaatttcc aagcctggga ctggcaattg caagccttcg gaatcagttg
      661 gttcggttac cgctgtgacc gaagctttga gtagatccat cgtcatcgac gaacccttcc
      721 ccgcatgaca ttttatccgg taaccccgga tgggtcgcga gtacagtgca tgtcgtgaat
      781 ttttcgagac agcgtccggt catcggaaag tgcacctctg tccgaagccg gggtccaggc
      841 gaaacctgga cccggaaagt cagtcaagca accggctaaa ccataggtta cggaaaaagt
      901 gtcgcattga ttcagatcaa ggcatccgac gctctctcac gaaggatcgt cggctccggt
      961 ccaccaatcc gtcttctggg ccggccaacc tcatcgtcga gcctgctggt caatgcacca
     1021 cccgttcaca ccctgcctcg ccaagcgcgg cgtggttgcg aatggcgatc ttcgtgccat
     1081 tgatggcaat cgtgccatcc agacggagcc gggttaaccg gcgacaaacg gtctcgatcg
     1141 ttaagcccag gtaatcgccc atgtcggagc ggctcatcgg caattcgatg gtcgactttg
     1201 cgtcggcgtt accccgcgcg gccatttcca gcaggaagct ggcaatccgc tcggacgcgg
     1261 tcttgcggcc cagaagcacc atgtgctccc gcccggaacg cagccggctc gaggaaagtt
     1321 cacgcagcct gcgggccacg tcgcggtcct gatcggccag ccgctcgaga tcgcggcgcg
     1381 cgtagcggcg cagcgtaacg ggtgtgaccg cctcggcacc gaaatcgtga ttatccaacg
     1441 cctcccagcc aaacagatcg ccggcgaaca gaaactcgcc aacctggcgg cggccatctt
     1501 ccatcagccg cacggtccgc acgcagccgc tcagcaccaa ataacaccag ttcgccggat
     1561 cttcctgggc cacgatctcg tcatcccgct cggcctggac ggttgttgcc cgcgattcca
     1621 gggctgccag gatttgcacc ttggccaatc tggcttgcgg tgcgtccggc ttcggcatac
     1681 cgcctgtagc cggatgcatt ccgatcggat aattcatggt gacgcctgac cgcggatcga
     1741 tcgcctggga tgtcgctgac atattaccct ctgcccctga tctgtgtttc catgtgtcaa
     1801 ggcataccta ggcgtgggtt ggcccgaaat tcggtatgac gcgtacgcaa ctttacgtag
     1861 tgtcaggagc atgagcgcga cggcgacaat ccatgtcgtg gatgacgatg ctgcgatgcg
     1921 cgattcattg cgcatgctgc tcgaagcggc ggggttcgcc gtgcgcacgt tcgacagcgc
     1981 cagcgcgttc ctcggctccg agcctgccgg ccttggctgc gtgctgactg acgtccgaat
     2041 gccggaaatc gacgggctcg cgctgttggt gcggttgcgc gaacaaggcg tgcacctgcc
     2101 agtcatcgtc atgaccggcc aaggcgatat cgccatcgcg gttcaggcca tgaaagccgg
     2161 cgcgatcgat ttcctggaga agccgttcga cgacgcaaca ctggtcgagg cagttggcaa
     2221 agcccagaca caaagccaaa agcagcagga ggccgtccag gcatccgccg aagcagcgtc
     2281 tcggctggcc actctgacgc cgcgagagcg tgaggttttc gacctactgg tcactggttt
     2341 gcccaacaag gcgatcgcta acacgttagg cgccagcccg cgcacgatcg aagtgcaccg
     2401 ggcgcgcgta ttcgagaagc tgaaggcaca caacctgccg gacctggttc gtttgctgtt
     2461 ggcggcggag tcaccaccgg cctgatcatt tcgaccgcgc cggctctcct gcagcgtcaa
     2521 atataggtgc tgacgaagtt cagcaggtcc gcttcctcgg gtggcttctc caacacgttc
     2581 acgatcccga gctgcgcagc tcgcgccaca attgccggcg agggcgaacc ggtgatcagc
     2641 aggattggaa tgctgtcgcc atcgttccgc agcgtctggg ccagttccag cccggtcatt
     2701 cccggcatgt gctgatcgat gatcaggcaa gtcggatcgg ttgcgccatc gccaagaaac
     2761 gcacctgccg aggcataggt cgaaacctga tacccgatca cctcaagcag gaatttcagc
     2821 gagtcgagga ccgcggggtc gtcatcgaca atcccaacga tgccagaatg gttatcgttc
     2881 atatgcctcc ggagccccgg ccaatcactg caggaaatgc agcgccatag gattggacct
     2941 gacacgttat ggtggaatcc cggcaacgct ccattgattc agatcagtcg atgcgctgtg
     3001 gtcgaattac gcggcgtcat cggctgccgg tttggcaaag cgcggcacgg tgaaacgaaa
     3061 taccgttccg ccgccggctg cgtcgccgcc atgcagttcg ccgccatggg cctcgacgat
     3121 ggcgcggcag accgacaggc ccacacccat cccgtcaggc ttcgtcgtga caaagggttg
     3181 aaacagcctc gtccgcaccg actcaggcag gcccggtccg gtgtccgcga cgcggatttc
     3241 caccgcatcg ccaatccggc tggcactgac ggtaagttcc cgtcgtgcaa cggtcgccat
     3301 ggcttccacg gcgttgcgca tcaggttgat cagcacctgc tggat
//
LOCUS       DATAVD010000883         5582 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2316739, whole genome shotgun sequence.
ACCESSION   DATAVD010000883 DATAVD010000000
VERSION     DATAVD010000883.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5582
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2316739"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="VHX39_16950"
     CDS             complement(<1..192)
                     /locus_tag="VHX39_16950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992861.1"
                     /translation="MVRAVVADPDDRAAFDIWYRNEHLPDAVKAFSANAAWRGWSSSD
                     PSVHCAYYRFESPERVDAVM"
     gene            complement(213..1142)
                     /locus_tag="VHX39_16955"
     CDS             complement(213..1142)
                     /locus_tag="VHX39_16955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX3992862.1"
                     /translation="MKLAFFDDFKLGVVKGDSIVDVSSVVRDIPHAGPGDLISGLIAQ
                     FDAYRGKLEAASAGAGVALSGVRIRPPLPKPGNIVCMAVNYMENGTLAKPAPINAFHK
                     APTSIIGPNDTMVLPDVPATIFEGEAEMALVIGKRATNVPASQAMDYIFGYINFIDGS
                     ARGLPPPGNVFFQMKSRDTFAPIGPYLVTKDEIADPQKLPIKLWVNGEVKQDFNTDDM
                     AHNIARCIEWASSIHTLEPGDILATGTNHRGLSSFMDGDVVELETQGLGRLRFNIRDE
                     LKRTWLRETRLDRQQKGQEGPTPQVSGKHAKTA"
     gene            complement(1179..2165)
                     /locus_tag="VHX39_16960"
     CDS             complement(1179..2165)
                     /locus_tag="VHX39_16960"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3992863.1"
                     /translation="MHLKLDDRLQIGIQTIHRRTEPATGPWLPTIDDLASFVTLVDEC
                     GYDSLWVGDHISFPLSIFDPLLQLAQAAVVSRRLMLGTGVLLLPLRHPTPVAKQVTTL
                     DHLTEGRLILGVGVGGEFPKEYAACDVPHNERGARLAEGVQVLRKFFSGEPVSHHGKF
                     YGPFEDVPMRPPPRQPGGPPIWFAGRKDAALRRIGRLGDGYLAYVITPAMYAAALETI
                     AAAANEANRGLQRFGTGHLLFTRLDRTYETALDRATETLSVRYAMDFRKAAARYCALG
                     TPEQVAERIREFHAAGVRHVVLDMLGPYEERQRQIEWFAADALPLLADLRAG"
     gene            2255..3037
                     /locus_tag="VHX39_16965"
     CDS             2255..3037
                     /locus_tag="VHX39_16965"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX3992864.1"
                     /translation="MPDLIETVENGIATLTLNRPERLNALSMDIRTGLLEALERLGHD
                     NSVGCIVLTGAGRAFCAGGDVKSMGERAAAGFEARAAGIQFSNRIPRLMRTLPKTIIA
                     MVNGVAVGAGLSMALACDLRVAGRSARFGTGFLKIGLSGDWGGTWTLTRLVGTAKARE
                     LYLLGDMISADEALSNGMVNRVADDAELLSTTLAMARRIADLPQIAVGHTKRNLHAAE
                     TGNFQSVLDMEAFNQARCSQTEDHREAVKAFAEKRKPVFYGR"
     gene            complement(3060..3875)
                     /locus_tag="VHX39_16970"
     CDS             complement(3060..3875)
                     /locus_tag="VHX39_16970"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3992865.1"
                     /translation="MLIIDAQVHIWGSGKPSDHHRQTSVFTAEELIKEMDEAGVDGAV
                     LHPPSWDAGSNEMAIEAATKYPDKFCSLGWFALNDPAQRKRIETWKQQPGMLGLRWSL
                     TRAGQETWHEDGTMDWLWPAAEKAGTPIATMAWRFLPLFGQIAERHPHLKLIIDHLGV
                     IRSTKDEAAFVNLAPLVALAKYPNVAVKATGAPSHSSVPYPFRNIHDGLQQIYDAFGP
                     RRFFWGTDITRMPCSYRQCVTMFTEELPWLKGRDLELVMGQGVIDWLGWKRSA"
     gene            4006..4779
                     /gene="surE"
                     /locus_tag="VHX39_16975"
     CDS             4006..4779
                     /gene="surE"
                     /locus_tag="VHX39_16975"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: protein motif:HMM:NF001490.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEX3992866.1"
                     /translation="MLDRVILTNDDGIDAPGMAVLEEIAAQIAREVWVVAPEHDQSGQ
                     SHAISLHHAIRVSERGVHRFGVTGTPGDCAAMGICHLMKDAPPQLMLSGVNRGVNLGL
                     ETVFSGTVGGAMTAMMLGVPAIALSQAFTDRNNVPWDTARTLGAPTIEKLVETGWAKG
                     ACLNVNFPPIPADQVGPIALAKQGEGLIAGMHVETRVDPRGLSYHWLNFRRSDRQQSP
                     GTDYSAMRAGRIVVTPLRYDRTDEDAFNELAQKLPKFEG"
     gene            complement(4892..5176)
                     /locus_tag="VHX39_16980"
     CDS             complement(4892..5176)
                     /locus_tag="VHX39_16980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004272552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEX3992867.1"
                     /translation="MIRDEFEIDEAILTRTATLETDCGLMSEQLEAILATVAQSFTLG
                     FPPGTLDEVVRLEELCMLAAWMKGFYKRPAFISDGFEATCRDMNPGCGSE"
     gene            complement(5308..>5582)
                     /locus_tag="VHX39_16985"
     CDS             complement(5308..>5582)
                     /locus_tag="VHX39_16985"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3992868.1"
                     /translation="GGIIALTRKLSLELGEYNINVNAIAPSLTLTERIRPHWNQRSPE
                     AQSVEIERTPLKRVAEAPDQAKVICFLASSDADFVTGLTIDVTGGL"
BASE COUNT         1151 a         1762 c         1596 g         1073 t
ORIGIN      
        1 catgaccgca tcaacacgct cgggcgactc gaatcgataa tacgcacagt ggacagatgg
       61 atcggatgaa ctccatcctc gccacgcagc atttgccgag aacgccttca cggcgtccgg
      121 caaatgctcg ttgcggtacc agatatcaaa ggcagcgcgg tcgtcgggat cggcgaccac
      181 cgcgcgcacc acaagccatg cgcctgacat tatcaggccg tctttgcgtg tttccccgac
      241 acctgcgggg ttggtccttc ctgccccttt tgctgacggt cgagacgggt ctcacgcagc
      301 caagtacgtt tcagttcgtc cctgatattg aaacgcagcc ggcccagtcc ctgggtctcc
      361 agttcaacca cgtcaccatc catgaagctg gacaggccac gatgattggt cccggtcgcc
      421 agaatgtcgc ctggctcgag tgtatggatc gaacttgccc attcaatgca acgggcgatg
      481 ttgtgagcca tatcgtcggt attgaagtct tgcttcacct cgccgttgac ccaaagcttg
      541 attggcagct tttgcgggtc cgcgatttca tccttggtaa ccagatacgg cccgatcgga
      601 gcaaacgtat cgcgcgactt catctgaaag aacacgttgc ctggcggcgg caggccgcga
      661 gccgacccgt cgatgaagtt gatatagccg aatatataat ccatcgcctg ggatgccgga
      721 acgttcgtcg ctcgcttacc gatgaccagc gccatttccg cctcgccttc gaagatcgtg
      781 gcgggaacgt caggcagcac catcgtgtcg ttcggaccga tgatcgatgt gggcgcttta
      841 tggaaagcgt tgatcggcgc tggcttcgcc aacgtcccgt tctccatgta gttcaccgcc
      901 atgcacacga tattgcccgg cttcggcaac gggggccgaa tacgcacgcc cgagagcgcg
      961 acccccgctc cagctgaagc cgcctcaagc ttgcctcgat aggcgtcgaa ctgcgcaatc
     1021 agtccgctga tcaggtctcc cggtcccgcg tgcgggatat cccggacgac cgacgacaca
     1081 tcgacgatcg aatccccctt gacgacaccg agtttgaaat cgtcgaaaaa tgccagtttc
     1141 atcggtttcc tcccaatatg ggttgtatgg gcactaccct aacctgccct taggtctgcc
     1201 agcaacggga gggcgtccgc agcgaaccac tcgatctgcc gctggcgctc ttcgtaagga
     1261 cccagcatgt ccagcaccac atgccggacg ccggcggcat gaaattcacg aatacgctcg
     1321 gcaacctgct cgggcgttcc aagagcacaa tatctcgccg ctgctttgcg aaaatccatg
     1381 gcgtagcgga cgctgagcgt ttccgtagcg cgatcgagtg ccgtttcata agtgcgatca
     1441 agtcgcgtga acaacaaatg cccggtgccg aaccgttgca aaccgcggtt tgcctcgttt
     1501 gctgccgcgg cgatcgtctc cagcgcagcg gcatacatgg caggcgtaat cacatatgcc
     1561 agatagccat cacccaacct tccgatccgt cgaagtgccg cgtccttgcg cccggcaaac
     1621 cagattggcg gcccgcctgg ctggcgtggc ggaggacgca tgggcacatc ctcgaacggc
     1681 ccgtaaaact tcccgtggtg gctgacaggc tctccactga agaacttgcg tagcacctga
     1741 acgccttcgg ccagacgggc accgcgttcg ttatgcggca cgtcgcaagc ggcatattct
     1801 ttcggaaact cgccaccgac gccaacgccg aggatcaggc ggccctcggt gagatgatcg
     1861 agcgtggtca cctgtttcgc gaccggggtc ggatgccgca aggggagcag cagcacgccc
     1921 gtccccagca tcaacctccg actgaccacc gctgcctggg ccaactgcaa tagcggatcg
     1981 aagatcgaca gcggaaacga gatatgatcg ccgacccaaa gggaatcata gccgcattca
     2041 tcaaccaacg tgacgaacga cgccagatcg tcgatcgttg gcaaccaggg gccggtcgct
     2101 ggttcggtgc gacgatgaat cgtctggatc ccgatctgca accgatcgtc caatttcagg
     2161 tgcatcgtcg tcctcctcgc caaagcaacg cgccagtgtt gcaggcaaag ctcggtaacg
     2221 ccaaggtcgg caaaaccatc cgttggagga ccagttgccc gacctgatcg agaccgttga
     2281 aaacggcatt gccacgctga cgctgaaccg ccccgagcga ctgaacgcgc tttccatgga
     2341 cattcggacc ggccttctcg aagcgctcga acgactgggc cacgacaaca gcgttggttg
     2401 tatcgttctg accggtgctg gccgcgcttt ttgtgccgga ggcgacgtca aatcgatggg
     2461 cgagcgtgcc gctgccggtt ttgaagcacg ggccgcaggg atccaattct cgaaccgtat
     2521 tcctcgcctg atgcggacgc tcccgaagac catcatcgcc atggtgaacg gcgttgcagt
     2581 cggtgccggc ctcagcatgg cactggcctg cgaccttcga gtggctgggc ggtcagcacg
     2641 cttcggaacc ggcttcctga agattggcct gtcgggtgat tggggcggca cctggacgct
     2701 gacccgcctt gtcggcaccg ccaaggcacg cgaactctac ctcctgggcg atatgatcag
     2761 tgcggatgag gcgctctcca acggcatggt caaccgggtt gccgatgacg ccgagctact
     2821 gagtacaacc ttggccatgg cacgccgcat cgcagacctg ccacagatcg ccgtcggcca
     2881 cacgaaacgc aatctgcacg cggccgagac aggaaatttc cagtctgtcc tcgacatgga
     2941 agcgttcaac caggcgcgct gctcgcaaac cgaggatcac cgagaggcag tcaaggcatt
     3001 cgctgagaag cgcaaacctg tcttctacgg tcgctgaccc ggcgactgta gggaacgcct
     3061 caggctgatc gtttccagcc caaccaatcg ataacgccct gccccatgac caactcaaga
     3121 tcgcggccct tcagccacgg cagttcttcg gtgaacatcg tcacacactg gcgataactg
     3181 cagggcatcc gagtgatgtc ggttccccag aagaaccgcc gtggcccaaa agcgtcgtag
     3241 atttgctgca ggccgtcatg gatgttccga aacggatagg gtacggacga gtggctcggt
     3301 gcgccggtcg ctttcacagc gacgttcgga tacttcgcca gcgcaaccag cggcgccaaa
     3361 ttcacaaagg cagcttcgtc cttcgtcgat cggatcacgc cgaggtgatc gatgatgagt
     3421 ttcaggtgcg gatgccgctc agcgatttgg ccgaacagcg gcaggaaccg ccacgccatt
     3481 gtcgcgatcg gtgttcccgc tttctccgcc gccggccaaa gccagtccat cgtgccatct
     3541 tcatgccacg tctcctgccc tgcccgcgtc aaagaccaac gtaagcccag catacccggc
     3601 tgctgcttcc atgtttcgat gcgcttgcgt tgcgcggggt cgttgagcgc aaaccaaccg
     3661 agactgcaga atttgtcggg atatttcgtg gccgcttcga tcgccatttc gttggagccg
     3721 gcgtcccaac tcggcggatg caacacggct ccgtcaactc cggcctcatc catctccttg
     3781 atcagttcct ccgccgtgaa tacggatgtc tggcggtgat ggtcactcgg cttgccgcta
     3841 ccccagatat gcacctgcgc gtcgatgatc agcatgatcg gcacctccct tggctgccgc
     3901 caatgctgag ccgtcgacaa aatccgcgca acccgcactc ggccctggac gcgcctaacg
     3961 gcggcaggca aacagcatcc agccatacga tgctggagat cttccgtgct cgaccgcgta
     4021 atcctgacca acgacgacgg catcgatgcc ccggggatgg cggtgctgga ggaaatcgca
     4081 gcccagatcg ccagggaagt ctgggtcgtc gcacccgagc acgaccaaag cggtcaatcc
     4141 cacgcaatca gcctgcatca tgcgatcagg gtctcggaac gcggagtgca tcgctttggc
     4201 gtcaccggca caccgggcga ctgcgccgct atgggcatct gccatctgat gaaggatgcg
     4261 ccgccccaac tgatgctgtc aggggtcaat cgcggggtaa atctggggct cgagaccgtg
     4321 ttctcaggca ccgtcggcgg cgccatgacc gcaatgatgc tgggcgtgcc ggcaatcgcg
     4381 ctgagccagg cgtttactga tcgcaacaat gtgccatggg ataccgcgcg cacgctcggc
     4441 gccccaacga tcgagaaact tgtcgaaacc ggttgggcaa aaggcgcctg cctgaacgtc
     4501 aatttcccgc ccatcccggc cgatcaggtc ggcccgatcg cactcgcgaa gcaaggcgag
     4561 ggcctgattg ccggtatgca tgtcgagaca agagtcgacc cgcgcggcct gtcctaccat
     4621 tggttgaact tccggcggag cgaccgccag caaagtcccg gaactgacta cagcgcgatg
     4681 cgggccggac ggatcgtcgt cacgccactg cgttatgacc gcaccgatga ggatgcgttc
     4741 aacgaactgg cccaaaaatt gccgaaattc gaaggctgac gacgcacggg caaacgaaca
     4801 cgacgcgcat tgtccggtgc gttcataacc tcgcctgaag ccgctcccgg cttgtgggcc
     4861 gacgactgac gggcaagcga gcactcgagc tttattctga cccgcagccc gggttcatgt
     4921 cgcggcaggt ggcttcaaaa ccgtcggaaa tgaatgccgg acgtttatag aatcccttca
     4981 tccaggcggc caacatacaa agctcctcca gtcggaccac ctcgtccagg gttccaggcg
     5041 gaaagccgag ggtgaagctc tgcgccacgg ttgcgagtat cgcttcaagt tgctcgctca
     5101 tcagtccgca atcagtttcc agcgtggcag ttcgcgtcag gatcgcctca tcgatctcaa
     5161 attcgtcgcg gatcatcttc acgatccaac gaaacatgtt catccagttc ttgacgtcgt
     5221 cgatcggtgg aggcatcggc gcgctcacgc ccaaaaggtt ctcgcactgc catatcgccg
     5281 aaagataatg aaacggttaa cgcggcgtca aaggccgcct gttacgtcaa tcgtcagacc
     5341 agttacgaaa tcggcgtcac tcgaggcgag gaagcagatg accttggcct ggtccggagc
     5401 ttcagccacg cgtttcaatg gcgtccgttc gatctccaca gattgtgcct cgggcgagcg
     5461 ctggttccaa tgcggacgaa tacgctcggt cagcgtcaga ctgggtgcaa tggcgttcac
     5521 gttgatattg tactcgccca gttcgagaga cagtttgcga gtcaacgcga tgatgccacc
     5581 tt
//
LOCUS       DATAVD010000884         4773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_643677, whole genome shotgun sequence.
ACCESSION   DATAVD010000884 DATAVD010000000
VERSION     DATAVD010000884.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4773
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_643677"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            308..580
                     /locus_tag="VHX39_16990"
     CDS             308..580
                     /locus_tag="VHX39_16990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992869.1"
                     /translation="MIPPSNFALRIIIEEDPRLVRDLNARYAGAAADGGLETVERDAL
                     FDVLGKHFTGRPWPRSGGMDVTRRFMADLQSGMIATRWKVDLLAMA"
     gene            complement(608..883)
                     /locus_tag="VHX39_16995"
     CDS             complement(608..883)
                     /locus_tag="VHX39_16995"
                     /inference="COORDINATES: protein motif:HMM:NF014624.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensitive transcriptional regulator"
                     /protein_id="HEX3992870.1"
                     /translation="MHDATKTEVTRRLRRIEGQVSGLLRMVEDDRYCVDVLTQIHAVR
                     AALHKVEEKVLGDHVSHCVAAAFTAGDVTDQRHKVEELISTIGRMTR"
     gene            989..3343
                     /locus_tag="VHX39_17000"
     CDS             989..3343
                     /locus_tag="VHX39_17000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042625 - ATPase-coupled ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEX3992871.1"
                     /translation="MADDQTDHDRHHGDASIPAPDVAVDPVCGMTVDRATSKHRLEHG
                     GLTFHFCSGRCREKFAAARANYLVPATQPAPTRLQGSTFTCPMHPEIRQEGPGSCPIC
                     GMALEPLVSTAEAPVNHELHDMTRRFWGGLLLALPVVVLEMGSHLRWLDLHHIVSATH
                     SAWIQCALSTPVVLWSGWPFFHRAWASVVNRSLNMFSLIALGTGTSYLYSLVAIFAPG
                     LFPAGFRGMDNTVAVYFEAAAVITVLVLLGQVLELRAREQAGGAIHALLNLTPKTAHR
                     LSLTGTDEEIPVASVQVGDRLRVRPGDGVPVDGMLLEGRSTVDEAMVTGESMPVPKQT
                     GDRLIGGTVNTTGSFVMRADKIGADTMLSRIVAMVAEAQRSRAPIQRLADTVSGVFVP
                     AVLAIAVLSYAIWALLGPAPSQSYALFAAVSVLIIACPCALGLATPMSIGVGIGRGAS
                     VGVLIRSAEALERMEKVDTLLVDKTGTLTEGKPNVVATLVAPGFTEAEVLRLAASLER
                     SSEHPLAAAIVAAAHDLGLSLQDPTDFKSITGKGVLGTVNGRAVALGSAKLMTDLAVS
                     FAELDEKADVLRRDGASVLYFAEDRRPGAVIAIADPIKSSTRGALDSLRADGVRIVML
                     TGDNKMTAEVVARRLGIEDFQADVLPEDKRRMVQTLRTEGRIVAMAGDGVNDAPALAE
                     ADVGIAMGTGTEVAIQSAGITVVKGDLAGIARARALSRATMRNIRQNLVFAFLYNVLG
                     IPVAAGLLYPALGVMLSPALAALAMSLSSVSVIGNALRLRSVRL"
     gene            3485..4408
                     /locus_tag="VHX39_17005"
     CDS             3485..4408
                     /locus_tag="VHX39_17005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992872.1"
                     /translation="MPQSQGNRFTAEPLSFVVRHQLLDGNVEDHVDQGVSIDVTATLY
                     GKETSLLRFNCFDNEKSYTYGPENPELSTPGRVGGGLGVHCQIDPITDGNPIGWTIHT
                     LSRKLPQMLERAGYKGCAALTDMEKVRAVLPEVESCARETFVAKRNTVKHNRGTDMFE
                     AGNIRFGLEMRRQKNGDGGLALHVLSDVGGSKGKAYVEETELLAFDCFWNNAHYHYGP
                     RNKNHRINWDMTVVDDPLEWTFQQIESRKLGQMIDRAGYPGIAADLDLDKIASVLPAL
                     KKRAFEMYEEGERLTGHKGLPLEFTPNMAAE"
     gene            complement(4556..>4773)
                     /locus_tag="VHX39_17010"
     CDS             complement(4556..>4773)
                     /locus_tag="VHX39_17010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992873.1"
                     /translation="GPEEWIGTKISFDLEQRGDWTIVLFKHTGWKQPVAFMHHCSTKW
                     AVFLLSLKSLLETGKGTAWPNEIKLDS"
BASE COUNT          902 a         1434 c         1491 g          946 t
ORIGIN      
        1 agccaggccc ggtgtgcgcg tgccgacgga aacgacgctg atacgttggc aaaggtgatg
       61 ggcggctcgt agatttttat ctcagccgat gttgccccgc tgccggcggt ctcggacccc
      121 ggacgaacag tccgccgccg gcctaatttg gcccgcggcc cgggcttcct cctggaacga
      181 caacaacagc agcaccatat atcgcgctcg agccggacca gatgaacacc cggctccgga
      241 gagacgtttg gccactttgt tgcctgggcc gctggcctgc tgccgatggg agctggaacg
      301 gcggcgaatg ataccgccct cgaactttgc cctcagaatc atcatcgagg aagatccaag
      361 gttggtgcgg gatctcaacg cacgctatgc cggtgccgcg gccgatggcg gtctggaaac
      421 cgtcgaacgg gatgcattgt tcgatgtcct cggcaagcat ttcaccggcc gtccctggcc
      481 gcgctccggc ggcatggacg tcacacgacg gttcatggct gacctgcaat caggcatgat
      541 cgccacacgt tggaaggtgg accttttggc gatggcctga gccgccattg atttcgcaag
      601 gtcccggcta cctcgtcatc ctgccgatcg tcgagatcag ttcttcaacc ttgtgacgct
      661 ggtccgtgac gtcgcctgca gtgaatgcgg cggcgacaca gtgcgatacg tgatcgccga
      721 ggaccttttc ctcgactttg tgcagtgcgg cgcggaccgc atgaatttgc gtcagcacat
      781 cgacgcaata gcggtcgtct tcaaccatcc gaagcaaacc gctcacctga ccctcgatac
      841 gcctgaggcg cctggtgacc tccgttttgg tggcatcgtg catcgcattg gtccttgata
      901 ccatacccct gaggggtata taggctctgg gcagggccgt tgtcacggcc tttgtatgtg
      961 atgtaccgaa caaatcagga ttgcccccat ggcggacgac cagactgacc acgaccgtca
     1021 tcatggcgac gcgtccattc ccgcaccgga cgtggcggtc gatccggtat gcggcatgac
     1081 ggtcgatcgc gcgacgtcaa agcatcgcct tgaacacggc ggactgacat ttcacttttg
     1141 ctccggacgg tgtcgcgaaa agtttgccgc cgcccgcgcc aattatttgg tgccggccac
     1201 acaaccagca ccaacaagac tgcaaggatc gacgttcacc tgcccaatgc atccggagat
     1261 caggcaggag gggccgggta gctgtcccat ctgcggtatg gcgctggagc cgttggtctc
     1321 gaccgccgaa gcgcccgtga atcacgagtt gcacgatatg acccgccgct tctggggcgg
     1381 gcttttgctc gcgttgccgg ttgtcgtgct ggagatgggc agtcatctgc ggtggctgga
     1441 tttgcatcac attgtgtcag ccacgcactc ggcctggata caatgtgcct tgtcgacgcc
     1501 ggttgtactt tggtccggct ggccgttctt tcaccgcgcc tgggcttcgg tggtgaacag
     1561 aagcctgaac atgttcagtc tgatcgcatt gggcaccggc acgtcctatc tgtacagcct
     1621 ggtcgcgatc ttcgccccgg gcctgttccc ggccggtttc cgaggaatgg acaacacggt
     1681 cgcggtttat ttcgaagccg ccgctgtcat cacggtcctt gtgctgctgg gtcaggttct
     1741 ggaattgcgc gcgcgtgaac aggctggagg cgccattcac gccctgctca acctcacgcc
     1801 gaagacggca catcggctgt cgttgaccgg aacggacgag gaaatcccgg tcgcttcggt
     1861 gcaagtcggc gaccggctac gcgtgcggcc cggagacggc gtgccggtcg atggcatgct
     1921 cttggagggc cgcagcactg tcgacgaagc catggtcacg ggcgaatcaa tgccggtgcc
     1981 gaagcaaacc ggcgaccgac tgatcggcgg gaccgtgaat acgaccggct cgttcgtgat
     2041 gcgcgctgac aaaattggcg ccgacaccat gctttctcgc atcgtcgcca tggtggcaga
     2101 agcgcagcgc agtcgcgcac caattcagcg tctggcggat accgtgtccg gcgtctttgt
     2161 gcctgcagtg ctcgccatag cggtgctgtc gtacgcgatc tgggcgctgc tgggaccggc
     2221 gccatcccaa tcttacgcac tttttgctgc ggtctcggtg ctcatcatcg cctgtccttg
     2281 tgcgctcggg cttgcaacac ccatgagcat cggcgtcggg atcggtcgtg gagcgagtgt
     2341 cggcgtgctt atccggtcgg ctgaggcgct ggagcgcatg gagaaggttg atacgctcct
     2401 ggtcgacaag acaggaaccc tgaccgaggg caaaccgaac gtcgtcgcga cccttgtcgc
     2461 acccggcttc acggaagctg aagtcctgcg tttggcagca agcctggaac ggtcgagcga
     2521 gcacccgctc gccgcggcga tcgttgcagc ggcgcatgat ctgggcttgt ctctgcaaga
     2581 cccaaccgac tttaaatcaa tcacaggcaa gggcgttctt ggcacggtca acgggcgcgc
     2641 cgtcgcgctt ggcagtgcca agctcatgac ggatctcgcc gtttcgtttg ccgagttgga
     2701 tgagaaagcc gatgtgctgc gccgcgatgg cgcgtccgtc ctttactttg ctgaggaccg
     2761 caggcccggt gctgtgattg cgatcgccga tcccatcaag agttcgacgc gaggtgcgct
     2821 ggacagcttg cgtgcggacg gcgtgcgtat cgtgatgctg accggcgata acaagatgac
     2881 ggccgaggtg gtagcacgtc gactggggat cgaagacttc caggccgatg tgttacccga
     2941 ggacaagcgt cgcatggttc agacgctccg gacggagggg cggatcgtag ccatggccgg
     3001 cgacggcgtg aatgacgcgc cggctctggc ggaggccgac gttggaattg ccatgggtac
     3061 cggcaccgag gttgcgatcc aaagcgctgg gatcacggtg gtaaagggcg acctcgccgg
     3121 gattgcccgg gcgcgcgccc tcagccgggc gaccatgcga aacatccggc agaaccttgt
     3181 cttcgctttt ctatacaatg tgttgggcat cccggtggca gcgggtttgc tctatccggc
     3241 gcttggcgtg atgctgagcc cagcgctcgc tgcgctggcg atgtcgctga gttctgtctc
     3301 ggtgatcggc aacgcactgc ggctgcggag cgtccgcctg taacaagggc tgctcatgac
     3361 gatggcagag ctgaaacgat ctgaagggcc ggaaggtggt aaggtgcccc tcagcaacca
     3421 ctcttgcgac catcgcgtcg tcgctttaga gttgtgcaaa cccgtatgac aggagcgccc
     3481 aaccatgccg caatcacaag gaaacagatt taccgccgaa ccgctgagct tcgtcgtccg
     3541 acaccaactc ctggacggca acgtcgagga ccatgttgac caaggggtct ccatcgacgt
     3601 gaccgccacg ctgtatggca aggaaacgtc gctgctgcgc ttcaactgct tcgacaacga
     3661 gaaaagctac acctacggcc cggaaaatcc cgagctttcg acgcctggcc gcgtcggcgg
     3721 cggcctgggc gtgcactgcc agatcgaccc gatcaccgac ggcaatccga tcggctggac
     3781 catccacaca ctgagccgca aactccccca gatgctggag cgcgctggct acaagggctg
     3841 tgcggcgctg accgacatgg aaaaggtgcg ggctgtcctg cctgaggtcg agtcctgcgc
     3901 aagagaaacg ttcgttgcga aacgtaacac ggtgaagcac aaccgcggca ccgacatgtt
     3961 cgaggctggt aacatccggt tcggactgga gatgcgtcgg cagaagaacg gggacggcgg
     4021 cctcgcgctg cacgtgctca gcgacgtcgg cggatcaaag ggcaaggcct acgtcgaaga
     4081 aaccgaactg ctggcattcg attgtttctg gaacaatgcg cactaccatt acggtccccg
     4141 caacaagaac caccggatca actgggacat gacagtcgtc gacgatccgt tggaatggac
     4201 cttccagcag atcgaaagtc gcaagcttgg gcagatgatc gatcgcgccg gttacccggg
     4261 gatcgcggcc gacctggacc tcgataagat cgcctcggtg ctgccggcgc tgaagaagag
     4321 ggcgttcgag atgtacgaag aaggtgaacg cctgaccggc cacaagggct tgccactcga
     4381 gttcacgccg aatatggccg ccgagtaacc aacgccgaaa cggtggagcg ctcgggcgcg
     4441 ctccaccgcc tcgcggctgc gacattgctt gagctgcccg atacgaccag tggtgattta
     4501 tcacagtctg gtaagttatc atggccgctc ccggtttaat ggcgcggcat cattcctagc
     4561 tgtcgagctt gatttcgttt ggccaagccg tgcccttgcc ggtttcgagc agcgacttca
     4621 gactcaacaa aaagaccgcc cattttgtgc tgcaatggtg catgaatgcc accggctgct
     4681 tccagcctgt gtgtttgaac agaacgatgg tccagtcgcc tctctgttcg agatcgaaac
     4741 tgatctttgt gccgatccat tcctcgggtc cgt
//
LOCUS       DATAVD010000885         1627 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1574046, whole genome shotgun sequence.
ACCESSION   DATAVD010000885 DATAVD010000000
VERSION     DATAVD010000885.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1574046"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..683
                     /locus_tag="VHX39_17015"
     CDS             <1..683
                     /locus_tag="VHX39_17015"
                     /inference="COORDINATES: protein motif:HMM:NF019643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="BBE domain-containing protein"
                     /protein_id="HEX3992874.1"
                     /translation="EMTTSLALLNLPPLPGLPPFMQGRRTVSVRISFAGDRASGARLI
                     EPLRRAAPPLSDNVTEIPYTEFASISNDPTDPAPAVEQFGLLRELTQETVKAIVDVAG
                     PGSESAINIVEIRHLEGAFARRAPYPNAVGARDAAFAVFALTVVPPGEKAVAYRQSGC
                     ELIAALQPWLHHKSSPCFQGPGDATVERTRKAYEPEIYAKLQAVKATYDPQNRFRINH
                     NIPPTAAS"
     gene            complement(937..>1627)
                     /locus_tag="VHX39_17020"
     CDS             complement(937..>1627)
                     /locus_tag="VHX39_17020"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3992875.1"
                     /translation="ATARVLHRQGFAVLVTGHNPDTIAAAKRTLPDDVVVLRADVRVL
                     ADADRVADEIRTLPSPLSVVFLNAGIHRMTPIEAVDEAMFDDIFAVNVKGQFFTLQKV
                     LPLLGDGGSVIFNGALGARKGLANWSVVSASKGALMALMPSLAIELAARRIRVNAVVP
                     GLIRTPVFDKLWPEPDKMAAFTESMDEHAPLGRMGADEDVANLVGFLASPAASYITGA
                     CLPIDGGAGVA"
BASE COUNT          298 a          530 c          500 g          299 t
ORIGIN      
        1 atgaaatgac cactagcctc gcgttactga atctgccgcc cctgccagga cttccgccgt
       61 ttatgcaggg tcggcggacc gtttcggtgc gcatctcatt cgccggcgat cgcgccagcg
      121 gagccaggct gatcgagccg ctgcgccggg cggcaccgcc cctgtccgac aacgtgaccg
      181 agattccata taccgagttc gcgtccatca gcaatgaccc aactgatccg gcacccgccg
      241 tggaacagtt cggtttgctc cgagaactga ctcaggaaac cgtcaaagcg atcgtcgacg
      301 tcgccggacc gggatccgaa agcgcgatca acatcgtcga gatccgccac cttgagggag
      361 cgttcgcccg gcgggcaccg tatcccaatg ccgtgggtgc acgcgacgcc gccttcgcgg
      421 tgttcgcttt aacggtcgtt cctcccgggg agaaggccgt cgcttatcgg caatcgggct
      481 gcgaactcat tgcggcgctg cagccttggc tccaccacaa gtccagtcct tgttttcaag
      541 gcccgggcga tgcgacagtg gaacgaaccc gtaaggccta cgagccggag atctacgcca
      601 aattgcaggc ggtcaaggca acatacgatc cgcagaacag gttccgcatt aaccacaaca
      661 ttccgccgac tgctgcctcg tagtcgtacg aatgctcggt acgtccgaac catacagcga
      721 tgactgctga acgtcgggct cgtcgggagg gtggagaacg ccgtgcggcg gtgcgcgcta
      781 tgcctgcctt atttcagcgt cgcggcgatg tagctcatat tccgtttctc gttgttcagg
      841 gcgccgctgg cgcgtcgtcg acgaccggtt gccattcgat tcgtgcgttt gtcgtggtca
      901 tcggctgaac cgaaatcctc tggcggagaa cccggatcag gcaacgcccg cgccgccgtc
      961 gatgggcagg cacgccccgg tgatatagct ggccgccggc gaggccagga acccgaccaa
     1021 gttggcgacg tcctcgtcgg cgcccatccg cccgagcggc gcgtgctcgt ccatggactc
     1081 ggtgaacgcc gccatcttgt cgggttcggg ccagagcttg tcgaagacgg gggtgcggat
     1141 caggccggga accacggcgt tcacccggat tcggcgtgcg gcgagctcga ttgccagcga
     1201 gggcatcagg gccatcagcg cgcccttgct cgcgctgaca acggaccaat tcgccagccc
     1261 tttcctggca cctaacgcgc cattgaagat gaccgatccg ccatcgccca gcagcggcag
     1321 aaccttttgc agagtgaaga actggccctt gacattgacc gcgaaaatgt catcgaacat
     1381 cgcctcgtcc accgcctcga tcggcgtcat ccgatggatt ccggcgttca agaacaccac
     1441 gctcagtggg ctcggcagtg tccgtatttc atcggctacc cggtccgcat cggcgagtac
     1501 ccggacatct gcgcgcagca cgacgacatc atcgggcagc gtgcgcttgg ccgcagcgat
     1561 cgtgtcggga ttgtgtccag tgaccagcac ggcgaagccc tgtcgatgta ggacgcgggc
     1621 ggtggcc
//
LOCUS       DATAVD010000886         8717 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1385714, whole genome shotgun sequence.
ACCESSION   DATAVD010000886 DATAVD010000000
VERSION     DATAVD010000886.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8717
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1385714"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1037)
                     /locus_tag="VHX39_17025"
     CDS             complement(<1..1037)
                     /locus_tag="VHX39_17025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HEX3992876.1"
                     /translation="MADCDHQGRIVVVVTGTGIITSLGQGQQENWHALTQGVSGIHRI
                     TRFPIGGLRTTIAGTVDFIPVAEPSAPAYAQRLAELVIEEALTESAIGHPGDFPGPLF
                     MALPPVEMEWPQRRTLAAAAAVNDGLSYTDLIRAADQGHFEPWFERFLFGSVGDGLAS
                     RFGTKGSPIATSTACASGGTAIQLGVEAIRRGDCEAALVVGTDASVNPESLIRFSLLS
                     ALSTRNDPPASAARPFSKDRDGFVMAEGAGALVLESLAHARARGAVILGVVEGCGEAA
                     DGFHRTRSSPDGKPIIACMTRALQDAGLPPDAIGYVNAHGTGTPENDKMEWVGISAVF
                     GDRSGSLPISS"
     gene            complement(1030..2220)
                     /locus_tag="VHX39_17030"
     CDS             complement(1030..2220)
                     /locus_tag="VHX39_17030"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: protein motif:HMM:NF005084.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HEX3992877.1"
                     /translation="MTTDRDPMITGIGLISCLGEGEAAHMAALDDFVPVVDEASFAPY
                     TVHPMTTFALDQQIPKRGDQRQMEPWQRFGVYAAGLALDSAKIKGDVGLLERMDMIVA
                     AGGGERDYAVDAAILAALPKQTDPDLYLNEHLLADIRPTLFLAQLSNLLAGNISIVHG
                     VIGSSRTFMGEEASGADALHIACARIQAGQSEICLVGGSFNAQRPDAFLHNAMGHALW
                     RGPFAPVWSRLPRGGVVLGSVGCFLVIESRAHARARGVTPKAHLAGVRTDRCNRAPGE
                     AAANAERQINALGGAVAASAVISGTTGAPAATAEERTVIDRLGLPVRAAATALGNSVE
                     PSFPTSVALAAMCVDRGRLFPPLEPAETPSAGPLKGVFVTSWGIWRGEATALVVPAQE
                     SGRG"
     gene            complement(2217..2699)
                     /locus_tag="VHX39_17035"
     CDS             complement(2217..2699)
                     /locus_tag="VHX39_17035"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ family
                     protein"
                     /protein_id="HEX3992878.1"
                     /translation="MILEYFQMVDRIEALDPHAGTIRTTCNVPGQSPVFIGHFPGFPR
                     LPGALMIETMAQTGGWLVLARLRFARMPFLTRVESAKLRRFVEPGETLDGAATLTHDG
                     SGFAVIEAVISTGGQKVASAEIRYVVGPFPNDTISGAMIIKAREIGFPEECLHAERSP
                     "
     gene            complement(2727..3008)
                     /locus_tag="VHX39_17040"
     CDS             complement(2727..3008)
                     /locus_tag="VHX39_17040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEX3992879.1"
                     /translation="MASTFETVADIIADTCDIERDKITPESHAIKDLGIDSLDFLDIA
                     FAIDKAFAIKMPLEQWTQEVNDGKVSTEEYFVLGNLCRHIDMLVAAKPA"
     gene            complement(3280..4410)
                     /locus_tag="VHX39_17045"
     CDS             complement(3280..4410)
                     /locus_tag="VHX39_17045"
                     /EC_number="2.7.7.60"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase/2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase"
                     /protein_id="HEX3992880.1"
                     /translation="MSLAAILVAAGTGSRFGSETPKQFLTLFGKPVVWHAARALIDAG
                     ATLQPVGEAGPIADALSGLPYLPTVPGGATRQDSVRAGLLALQPHRPDFVLIHDAARP
                     FIPPGTVPALLAALTQYPGAIPAAPVADTLKRVRDGAIEKTVPRDGLFRAQTPQAFRF
                     DAILGAHLAGVTGATDDAALLEALGLDVAIVPGSERNIKLTYRDDLVRLEGAMSTTLV
                     PHIGTGFDVHVLTEGRPLMLCGVTVPHDKGLSGHSDADVGIHALCDAIYGALAEGDIG
                     HHFPPANATWKNADSAHFLGHAAARIAARGGQLVNADVTLICEQPKIAPHAQAMRERL
                     AAILGVAAGCISVKATTTEKLGFTGRGEGIAAQAAAIVLLPR"
     gene            complement(4574..4984)
                     /locus_tag="VHX39_17050"
     CDS             complement(4574..4984)
                     /locus_tag="VHX39_17050"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3992881.1"
                     /translation="MTTLDGVKILVVDDEPFMRTTIKAVLRAAGRFDVLEADDGDVAL
                     PEVERWKPDVVLCDINMPRMGGLRFVELLRRHPEARMRETPVIILTGRAEVTTVVAAS
                     KLQINGYLVKPVSPRQIGDQLQKVLGNRQAVPLT"
     gene            complement(4981..7917)
                     /locus_tag="VHX39_17055"
     CDS             complement(4981..7917)
                     /locus_tag="VHX39_17055"
                     /inference="COORDINATES: protein motif:HMM:NF024267.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3992882.1"
                     /translation="MWTRVPRWIAAVARSTGEYGAAGVGLFGIIILWAGLLHSLSVER
                     QAVIDKVFDDTNNYARAFQQQSAGIVHSIDQTLRYVRASYMRAPEKFDISQWSEHGEF
                     LTNPAYQVSIIDKNGWLRLSSFGAITRPVDLRDRAHYRFQVENAGDLMFISQPVMLRF
                     IDKPAIQFTRRMAGPDGTFAGVVTVSIDPSFLTRFYDSLDLVGDGIVALVGTDGIVRA
                     RAPADQRTLDHALFDAPIMRRLAHRPNGSMSAVSPIDGIRRIYSYRPVEGYPLFVVVG
                     MSERLALADWEYSQRNRLAMACVVTSALLIVVISFVAYQARLRRAREALRQSEARHAQ
                     KSHLLEVTLQNMDQGIIKMDADQVVEVVNRRMGELYDLPDNVATGPHTQPAMLELLWE
                     RGEFGRDDADFATWFERFSHAGGHGGDGIPHEHYRPNGRVLEIRGRWLPDGGAVQTFT
                     DVTARKQAEETLRAARDEADRSARAKSEFLAMMSHEIRSPMSGLLGIIELLRDTPLAP
                     EQHDMIDLVHGSAASLLRVVNDILDFSKMEAGRLAVNLEPVELRKLLEILVEPTLLAA
                     EAKGLQFSSVVADDVPASLMLDPLRLRQILVNLLTNAVKFTAAGTVSLEVTCFVGPYG
                     ERALCFAVRDSGIGMSPKQLCRLFEPFSQADASTTKMFGGTGLGLTISRRLARLLAGD
                     ITVESEQGAGSVFKLTLELLPTTPLTVGMTDPVEPADPAILEPWRILVAEDLATNRWL
                     IERQLERLGCTVVAVEHGHAALAAMEAGTFDLLISDCHMPELDGVALTQLIRANEAEL
                     SAPRMLILGLTADVSTEMRARCLSAGMDDLVAKPIDLRRLRVALARLTHPGEEEAVAA
                     ADAVTSVVFDSAACRELFADAAAEGREWLTAYLASAERLVTDVERSVAAGDRNVLTAS
                     AHKLAGASLAAGAMDLGTLARRLESVSPWASAQDLRELTEQIVAARCDARQAIRDFIA
                     TPEAVT"
     gene            8277..>8717
                     /locus_tag="VHX39_17060"
     CDS             8277..>8717
                     /locus_tag="VHX39_17060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018980100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEX3992883.1"
                     /translation="MGISRSESTLPALGPIDLGQGVRLDTPVILAPMSGVTDLPFRRT
                     AKSLGAGMVVSEMIASWAMLRENQKTLSMAQVDGAGGISAVQLAGCEPAAMAEAARIA
                     VDKGADLIDINFGCPVKKVAVGQSAGSALMRDERAAAAILQATVN"
BASE COUNT         1719 a         2764 c         2700 g         1534 t
ORIGIN      
        1 ttggacgaga ttggcaacga accagaccga tcgccgaaca cggcggagat tccaacccac
       61 tccattttgt cgttttccgg cgtaccggtg ccatgcgcgt tcacgtaccc gatcgcatca
      121 ggcggcaaac ccgcatcctg caacgctcgt gtcatgcagg cgatgatcgg cttgccatcc
      181 ggcgatgatc ttgtgcgatg gaacccatcg gccgcctcac cgcaaccttc gacaacgccg
      241 agtatcaccg ctccccgcgc acgcgcatgt gccagacttt ccaggaccag agcacccgca
      301 ccctcggcca tcacgaagcc gtcccggtcc ttgctgaacg gccgagcggc ggaagccggc
      361 ggatcatttc tggtcgacag tgccgacagc aggctgaacc ggatcaggct ctcgggattg
      421 accgacgcgt cggtgcccac gaccaaggcc gcctcgcaat caccgcggcg gattgcttcg
      481 acgccgagct gaattgcggt gccgccggag gcgcaagcgg tggaggtcgc gatcggtgag
      541 cctttggttc caaaccggct ggccaacccg tcaccgaccg agccaaacag aaaccgctcg
      601 aaccatggtt cgaagtggcc ctgatccgcc gcgcggatca gatcggtgta actgagaccg
      661 tcattgaccg cggcagcagc ggcgagggtt cggcgctgtg gccactccat ctccactggc
      721 ggcaatgcca tgaacagtgg tccgggaaag tcgcccggat ggccgatagc ggattcggtc
      781 agggcctcct caatcaccag ttcggcgagg cgttgcgcat aggcgggcgc agacggttct
      841 gcgacaggaa tgaaatccac ggtgcccgcg atggtggtgc gaaggccgcc tatcggaaac
      901 cgggtaattc ggtgaatgcc cgacacgccc tgggtcaggg cgtgccagtt ttcctgctgc
      961 ccctggccaa gtgacgtgat gatcccagtc ccggtcacga caacaacaat gcggccctga
     1021 tgatcgcaat cagccacgtc cgctctcctg tgccgggacc accagagcgg tggcctcacc
     1081 gcgccagatg ccccaggatg tgacgaacac gcccttcaaa ggtccggcgg aaggggtttc
     1141 agcgggttcc aggggcggga acaacctgcc tcgatcgacg cacatcgcgg ccagggcgac
     1201 cgacgtagga aacgacggct cgaccgaatt gccaagtgcg gtcgcggcgg cgcgtacagg
     1261 taggcccaac cggtcaatga cggtccgctc ctccgcggtc gcagcggggg cgccggtcgt
     1321 gccggaaatg accgcactgg cggcaaccgc gccgcccaat gcattgatct gtcgctcagc
     1381 gtttgccgcg gcttctcccg gggcgcggtt gcagcgatcg gtccggacgc cagcaagatg
     1441 ggcctttgga gtaacgccac gggcccgggc atgggcgcga ctctcgatga ccagaaagca
     1501 accaactgac cccaacacaa ccccgccacg aggaaggcgg gaccagacgg gtgcaaacgg
     1561 accgcgccaa agtgcgtgcc ccatggcgtt atgcaaaaac gcgtcgggcc gttgggcatt
     1621 aaacgagccg ccgacgaggc atatctcgct ttgcccagcc tggatccgcg cgcaggcaat
     1681 gtgcaacgcg tcggccccgc tggcttcctc gcccatgaag gtgcgcgagg acccgatcac
     1741 gccgtgcacg atcgaaatgt tgccggccag caggttcgac agttgggcga ggaacagcgt
     1801 aggacggata tccgccagca agtgctcgtt caaatacaga tcaggatcgg tctgcttcgg
     1861 caaggcagcc aggatcgccg cgtcaaccgc gtaatcacgc tcgcctccgc cagccgcgac
     1921 gatcatgtcc atgcgttcga gcagtccgac gtcgcctttg atctttgccg aatcaagcgc
     1981 cagtccggcc gcgtaaaccc cgaaccgctg ccagggttcc atctgtcgtt gatcgccgcg
     2041 tttcgggatt tgctggtcaa gcgcaaaggt ggtcatcgga tgcaccgtgt agggcgcgaa
     2101 actggcctca tcgaccacgg gtacgaagtc gtcgagcgct gccatatggg cagcctcacc
     2161 ctcgcctagg caggaaatca gtccgatgcc cgtgatcatc ggatcgcggt cagtggtcat
     2221 ggtgatcgtt cggcatgcag gcactcctcg gggaagccga tttcacgtgc cttgataatc
     2281 atagctccac tgatggtgtc attcgggaac ggcccgacga catagcggat ttccgccgag
     2341 gcgacctttt gaccaccggt cgaaatcaca gcctcgatca ccgcgaagcc ggagccgtca
     2401 tgggtcaggg ttgcggcacc atcgagggtc tcgccgggtt cgacaaagcg tcgaagtttg
     2461 gcgctttcga cgcgggtcag gaatggcatc cgggcaaacc gcaaccgggc gagcaccagc
     2521 caaccgccgg tttgtgccat ggtctcgatc atcagcgcgc ccggcaggcg aggaaacccc
     2581 gggaagtgac caatgaacac ggggctttgt ccagggacgt tgcaggtggt gcggatcgtg
     2641 ccggcatgcg gatcgagtgc ctcgatccgg tcgaccatct gaaaatactc aaggatcatg
     2701 gcctcacccg atctttcggc gagcggtcag gccggttttg ccgccaccag catgtcgatg
     2761 tgcctgcaca ggttgccaag aacgaagtac tcctcagtcg agaccttgcc gtcattgact
     2821 tcctgggtcc actgctccag cggcatcttg atggcgaacg ccttgtcgat ggcgaacgcg
     2881 atgtcgagga agtcgagact gtcgatgccc agatctttga tggcgtggct ctcgggggta
     2941 attttgtcgc gctcgatgtc gcacgtgtcg gcgatgatgt cggcaacggt ctcgaacgtg
     3001 gacgccatta gtcaacccct tgtcggatgg gtccgggact aacacccgac cccagggtgc
     3061 cgcaagaccg ccgtccgggt ttcgtccctg gctataagca ggtcacgtga agcgcattgg
     3121 caggtccgtc gcgaaagctg tcgcatcagg gtaactggcg cgcgatccac cattcggcga
     3181 cggcggtggg ttgttcagcc ggcgagccac aagtcacaga cgtcgaaaaa acaagatctg
     3241 tcccgttcgc ctgtcgcttc ggcgccttac cggtggtgcc taccggggca gcaggacgat
     3301 tgccgccgcc tgcgctgcga tcccttcgcc ccgcccggtg aacccgagtt tttccgtcgt
     3361 tgtcgccttg accgaaatgc acccggccgc gacccccaga attgccgcca gtcgctcacg
     3421 cattgcctgg gcatgggggg caatctttgg ctgctcgcag ataagcgtca catcagcgtt
     3481 aaccaactgg ccgccgcggg cggcgatccg ggccgctgca tggcccagaa aatgtgcgct
     3541 gtccgcattc ttccaggtgg cattggcggg agggaaatgg tggccgatat cgccctcggc
     3601 caatgcgcca taaatggcat cgcacaaagc gtggatgccg acatcggcgt ccgagtgccc
     3661 agagaggcct ttgtcatgcg gaaccgtgac gccgcacaac atcagcggcc ggccctccgt
     3721 caggacatgc acatcgaagc cggtgccgat atgcggaacc agagtagtgg acatggcgcc
     3781 ctccagcctg acaaggtcat cccggtaagt cagtttgatg ttgcgctcgg agccaggcac
     3841 gatcgccacg tccagaccca gagcctcaag cagcgcggcg tcgtcagtgg ccccggtcac
     3901 cccggcgagg tgcgcgccga ggatcgcgtc gaaacggaac gcctgtgggg tttgcgcgcg
     3961 gaacaggccg tcgcgtggga cggttttctc gatggcccca tcacgcactc gcttcagcgt
     4021 atcggcgacg ggtgccgcgg ggatcgctcc cgggtattgc gtcagcgccg ccagcaaggc
     4081 tggtacagta ccgggcggaa tgaacggacg ggcggcgtcg tggatcagca cgaaatctgg
     4141 ccgatgcggc tgcagcgcca aaaggcccgc ccgcacactg tcctgacgag ttgccccgcc
     4201 ggggaccgtg ggcaaatacg gcaaaccgga cagcgcatcg gctatgggac ctgcttcgcc
     4261 aaccggctgc agcgtggcac cggcgtcaat cagcgcgcga gcggcgtgcc agaccacagg
     4321 tttgccaaaa agtgtgagaa attgtttcgg cgtctcgctg ccgaaacggc ttccggtgcc
     4381 ggcagcgacg aggatggcag caagactcat gcccacaggc aagcccagag cacgaagcag
     4441 gtcaatccgc ggaccgcata actggttacg ccagactggt tacgccagac cggttacgcc
     4501 agaccggtta cgccggcatc atcacaggcc gaacgagggt cgtggcgttt gcctgatcag
     4561 gtcgatcaag gcatcaggtc agcggcacgg cctgtcggtt gccgaggact ttttgcaatt
     4621 ggtcgccaat ctgcctcggt gaaaccggtt tgaccaggta accattgatc tgcaatttcg
     4681 atgctgcaac gaccgtggtg acctcggcac gcccggtcag aatgatcacc ggcgtttcgc
     4741 gcatgcgcgc ttcgggatgc cggcgcaaca actcgacgaa ccgcaggcct cccatgcgtg
     4801 gcatgttgat gtcgcacagc acgacgtccg gcttccaccg ctcgacctcg gggagtgcca
     4861 cgtcgccgtc atcggcctcc aacacatcga agcggccggc tgctcgcagt accgccttga
     4921 tggtcgtgcg catgaacggt tcgtcgtcca cgacgaggat tttcacgcca tccaacgtgg
     4981 tcatgtcacc gcctccgggg ttgcaatgaa gtcgcggatt gcctgccgcg catcacaccg
     5041 ggcagcaacg atctgctcgg tcaactcacg caggtcctgc gccgacgccc atggtgaaac
     5101 ggactccaac cggcgtgcga gagtgcccag atccatcgcc ccggccgcca gtgatgcccc
     5161 cgccagttta tgagcgctgg ccgtcaaaac attgcggtct ccggcggcga cactccgctc
     5221 gacgtcagtc accaaccgct cggccgaagc aagataggcg gtaagccact cgcggccttc
     5281 agccgcagcg tcagcaaata attcgcgaca ggcggcggaa tcgaacacga cagatgtgac
     5341 agcgtcggcc gcggcgacag cttcctcctc cccgggatgg gtcaggcgtg cgagggcaac
     5401 gcgtagccga cgcaggtcga tcggcttggc gacaaggtcg tccatcccgg ccgaaagaca
     5461 gcgcgctcgc atctctgtcg aaacatcggc ggtcagtccg agaatgagca tgcgaggcgc
     5521 actcagttcc gcctcgtttg cgcggatcag ttgggtcagt gcaacgccat cgagctccgg
     5581 catgtggcag tcggaaatca acagatcgaa cgttccggcc tccattgcgg cgagcgcggc
     5641 gtgaccgtgc tctacagcaa cgaccgtaca tccgaggcgt tccagttggc gctcgatcaa
     5701 ccagcggttc gtcgccagat cctcagcaac aaggatgcgc cagggttcaa ggatggccgg
     5761 atcggcgggt tccaccggat cagtcattcc gacggtaagc ggggttgtcg gcagcagttc
     5821 cagggtcagt ttgaacaccg agcccgcacc ctgctcgctc tcgacagtga tatcgccggc
     5881 cagcaagcga gcgagccggc gcgagatggt caggcccagg ccagtgccgc caaacatttt
     5941 ggtggtcgag gcatctgcct ggctgaatgg ttcgaacagc cggcagagtt gcttcggcga
     6001 cataccgata ccgctatcgc ggaccgcgaa acaaagcgct cgctcgccat agggaccgac
     6061 gaaacaggtc acttccaggc tcacggttcc agccgcggtg aatttaactg cattggtcag
     6121 cagattgacc agaatttggc gcaaccgcag aggatccagc atgagcgagg cgggcacatc
     6181 gtcggccacc acgctggaga actgcagacc cttcgcctcg gctgcgagca gcgtgggttc
     6241 aaccaagatt tccagcagtt tgcggagttc gaccggctcc aaattcactg ccagccggcc
     6301 cgcctccatc tttgagaaat ccaggatatc gttgacgacg cgcagcagcg aggcggccga
     6361 gccatgcacg agatcgatca tgtcgtgttg ttcaggcgcc aaaggggtgt cacgcaacag
     6421 ttcgatgatg ccgagcaggc cgctcatcgg cgaccttatc tcgtgactca tcatggcgag
     6481 gaattcggat tttgcgcgcg ccgagcggtc cgcttcgtcg cgcgcggcgc gcagtgtttc
     6541 ctctgcctgc ttgcgcgcgg tgacgtcggt gaaggtctgc accgcaccac cgtccggcag
     6601 ccatcgacca cggatctcaa gcaccctgcc gttgggacga taatgttcat ggggaatgcc
     6661 atctccgcca tgtccgccgg catggctgaa tcgctcaaac caggtcgcga aatcggcatc
     6721 gtcacgaccg aattcgccac gttcccacaa caattccaac attgcaggtt gcgtgtgcgg
     6781 gccggtcgcg acgttgtccg gcaggtcgta caattcgccc atccggcggt tgaccacttc
     6841 gacgacctga tctgcatcca tcttaataat gccctgatcc atgttttgca gggttacctc
     6901 gagcagatgc gacttttgcg catgccgtgc ttcgctctgc cgcagcgctt cacgcgcgcg
     6961 gcgcagacgg gcctgatacg ccacgaagga aatgaccacg atcagcaacg cgctggtcac
     7021 cacgcaggcc attgccagac ggttgcgctg actgtactcc caatcggcga gcgcaaggcg
     7081 ctcgctcatg ccgactacca cgaacagcgg atatccctcg accggacggt aactgtagat
     7141 gcgccggatc ccgtcaattg ggctcaccgc gctcatgctg ccatttggtc tatgggcgag
     7201 ccgccgcatg atcggggcgt cgaacagcgc atgatcgagc gttcgttgat cggccggcgc
     7261 ccgcgcgcgc acgataccgt cggtgccgac cagggccacg atgccgtcgc cgaccaggtc
     7321 cagggaatca tagaagcggg tcaaaaagga cggatcgatc gagacagtga ccacgccggc
     7381 gaatgttcca tccgggccgg ccatacgccg ggtgaactgg atcgccggtt tatcgataaa
     7441 ccgcagcatg accggctggc tgatgaacat caggtcgccg gcgttctcaa cctggaagcg
     7501 gtagtgtgcg cggtcccgga gatcgaccgg gcgggtaatc gcaccgaagc tggaaagccg
     7561 cagccacccg ttcttgtcga tgatggagac ctggtaggcc ggattggtca gaaactcgcc
     7621 atgctccgac cactgtgaaa tgtcgaactt ttccggcgcg cgcatgtagg aagcccggac
     7681 ataacgcagg gtctggtcga tggaatgcac gatgccggcg ctttgctgct ggaatgccct
     7741 ggcgtaattg ttagtgtcgt cgaacacttt atcgattacc gcctggcgtt cgactgacag
     7801 cgaatgcagc aaacccgccc acaggatgat gatgccgaac aagccgacgc ctgctgcgcc
     7861 gtattccccg gtgctgcggg caacggcggc gatccagcgc ggaacgcgcg tccacacggg
     7921 gaagtgttca ggggttgcgc cgagggaagc gggaggctgc gccgaatgct gcatggtgcg
     7981 catgacgatc caggtcgaac cagagcattc tgtgcctgac ggattaacgg ctggttaatg
     8041 cggacccctc tgacggtggc agttcatccc ttcccggctt cctgcggccc aaccagggca
     8101 cagacacttg cggggccgtt atggcaagcg cgtcgcgaac aactcctgag ccgagcatct
     8161 tcagtccctc caaatggcac ggcgcagcca tgttccgaca aaatcgtaac cagggaacac
     8221 gtgattaaca ccaccccgtt gcatgtaatc cggccacaag ctaatttgcc caaatcatgg
     8281 gcatttccag atcagaaagc acgctccctg ccctcggacc aatcgatctg ggccagggtg
     8341 tccggctcga cacgccggtc atcctggcgc cgatgtcagg ggtcaccgac ctaccattcc
     8401 ggcgcaccgc caaatccctc ggcgcaggca tggtcgtttc cgaaatgatc gcctcctggg
     8461 ccatgctacg cgagaaccag aaaaccctgt cgatggccca ggttgacggg gccggaggga
     8521 tctcggcggt acaattggca ggttgcgagc cggccgcgat ggccgaagcg gcccgcatcg
     8581 ccgtcgataa aggtgccgac ctcatcgata tcaacttcgg ttgtccggtg aagaaggttg
     8641 ccgtcggcca gagtgcaggc tcggccctga tgcgcgacga acgcgccgct gcggcgatcc
     8701 tgcaagccac cgtcaat
//
LOCUS       DATAVD010000887         1509 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3246739, whole genome shotgun sequence.
ACCESSION   DATAVD010000887 DATAVD010000000
VERSION     DATAVD010000887.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3246739"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1509)
                     /locus_tag="VHX39_17065"
     CDS             complement(<1..>1509)
                     /locus_tag="VHX39_17065"
                     /inference="COORDINATES: protein motif:HMM:NF014026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HEX3992884.1"
                     /translation="PRWGRVNENFSEDPFLVQTFAVQTIRAMQGDDPNYLKTIACAKH
                     YACNDTDTDRDYADAAPDRRSFWEYYTRGFEASVTQAQVFSVMSAYNSLWGIPCPASH
                     FLLTEVLRHRWGFKGYVVSDCDAIANIYRTHHYVETAPEAAALAVKAGSDLNCGNTLT
                     QFLGKSVEQKLVSEEAIRTALTRILAGRFLLGEFDPPSSVPWTSLSADIIEGQDHREL
                     AREAARQSLVLLKNEGTLLPLDKNKLKKIAVIGPMADSCHLGGYSGRATILVSPRAGI
                     ANAFGEAIYSDTVPAGDYISTSNFRGPVVAFSDDGSQMLSSIRNNTWAQYGPLNLDNK
                     TSIELRVASSADGDVSIYLDSLSEKPVATVHIPATGGMDTWKTVSAPLSGLTGSHVVF
                     LRFVGSAVRTEFINLESFSLLPVAPASHANHRVTYAPGSTITGPRNEALLQAAVKAAK
                     EAETVILFVGDNRLLSDEGVDRYELDLPDVQQELVKVIVAANPRTVVVVNTGC"
BASE COUNT          307 a          397 c          474 g          331 t
ORIGIN      
        1 gcagcccgtg ttgacgacaa cgacagtgcg cggattggcc gcaacgatca ctttcacaag
       61 ttcctgctgc acgtcgggaa gatccaattc gtaccgatcg acgccttcgt ccgaaagcag
      121 acggttgtcc ccgacaaaca agatcactgt ttctgcttct ttggcagcct tcactgctgc
      181 ctgcaggaga gcctcgtttc ttggaccggt gattgtcgag ccaggagcat aggtcacgcg
      241 atgattggcg tggcttgcag gcgcaacggg cagaagcgag aacgactcta gattgataaa
      301 ttctgtgcgg accgcgctgc ccacgaacct caggaaaacg acatgactcc ccgtaaggcc
      361 gctgagcgga gcgctgaccg tcttccacgt atccattccg ccggtggcgg gaatgtggac
      421 ggtggcgacg ggtttttcac tcaggctatc gagataaatg ctcacatctc cgtccgcact
      481 gctggcgacg cgcaattcga tggaggtttt gttgtcgaga ttcagtggtc cgtattgggc
      541 ccaggtgttg tttctgatgc tggacagcat ttgggagccg tcgtcagaga aagcgaccac
      601 gggtccgcgg aagttcgatg tgctgatgta gtcgccggcg ggaacggtgt cggaatagat
      661 tgcttcaccg aatgcgttgg cgattccggc gcgtggcgag accagaattg ttgcccggcc
      721 gctgtagccg ccgagatggc atgagtctgc catgggaccg atgacggcaa ttttcttgag
      781 cttgttcttg tcgagcggaa gaagagttcc ctcgttcttg agcagtacca gcgattggcg
      841 agcagcctcg cgcgccaact ctcgatggtc ctgcccttca attatgtcgg cggagagact
      901 tgtccaaggc acgctggacg gcggatcaaa ttcaccgagg agaaagcggc cggcgagaat
      961 tcgcgtgagt gcggtgcgga tcgcctcttc tgaaacaagc ttttgctcga ctgatttgcc
     1021 caggaattgc gtgagggtgt tgccgcaatt caaatccgag ccggctttga ctgctaaggc
     1081 cgcggcttcc ggagcggtct caacataatg atgggtgcga tagatgttcg cgatggcatc
     1141 gcaatcggaa acgacatagc ccttgaatcc ccagcggtgg cgcaggactt cggtcagcaa
     1201 gaaatggctg gcgggacacg gaatacccca cagggagttg tacgccgaca tgacactgaa
     1261 aacttgcgcc tgggtgacgc tggcctcgaa gcctcgcgtg tagtactccc aaaaactgcg
     1321 gcgatcgggc gctgcgtcgg cgtaatcgcg atcggtgtct gtgtcgttgc aggcgtagtg
     1381 cttggcgcag gcaatggtct tgagatagtt tggatcgtca ccctgcatgg cgcggatggt
     1441 ttgcacggcg aacgtctgga cgaggaatgg atcttcgctg aaattctcat tgacgcggcc
     1501 ccaacgggg
//
LOCUS       DATAVD010000888         2363 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1760187, whole genome shotgun sequence.
ACCESSION   DATAVD010000888 DATAVD010000000
VERSION     DATAVD010000888.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2363
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1760187"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..571)
                     /locus_tag="VHX39_17070"
     CDS             complement(<1..571)
                     /locus_tag="VHX39_17070"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HEX3992885.1"
                     /translation="MLSRIPNATYRIYGKTATTVRDLKGLRLTPDATLADAPPLDVLH
                     VPGGYGQEALMEDAEVLGWIRLQAAGACSIFSVCTGALICGAAGLLKGRRATTHWSAF
                     HLLPLFGAIPVNQRVVVDGAWVFAAGVTAGIDAALRLAAELRGEEAAQTIQLHMAYAP
                     EPPFNAGTPETAPATVLQQARQSVRAITDQ"
     gene            639..824
                     /locus_tag="VHX39_17075"
                     /pseudo
     CDS             639..824
                     /locus_tag="VHX39_17075"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GlxA family transcriptional regulator"
     gene            852..1265
                     /locus_tag="VHX39_17080"
     CDS             852..1265
                     /locus_tag="VHX39_17080"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3992886.1"
                     /translation="MALAVARFLVVFLKRPGGQAQFSAALASQAAEHKFGALHHWITD
                     HLGDDLSLSVLADQAAMSERSFSRHYAEATGQTPARAIERLRIEAARRLLAESRLPVK
                     RIAQRCGFGSEETMRRSFLRLLAVTPQDYRARFTF"
     gene            complement(1279..>2363)
                     /locus_tag="VHX39_17085"
     CDS             complement(1279..>2363)
                     /locus_tag="VHX39_17085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992887.1"
                     /translation="RKARGENVDTELAEAGHVAMEEVVRKQRDAGIDIGNNGEQQREA
                     FFLYVRGRMTGFGGSWDRPPRGDVDKYPLFKAHMAQDVGQQRAISARDGLPTAIGDVQ
                     YQNRAAIEQECADFRATLDKMAQPFAEPFLTAPSPGIVAAAMRNDHYPTEMDYLNALG
                     RALQVEYETIVRHGFLLQLDCPDLAMERHYTWHEKPLDDFLGFVDRVVRTINGALVNI
                     PRERVRLHVCWGNYEGPHDCDVELKELMPVLRQLNVGGFVFPFANPRHAHEYRVLKDF
                     PLDQDQIIVAGVIDSVTNFVEHPETIADRIERVAEVVGDPTKVQAGTDCGFDTSAGSR
                     RVAEDVVWAKLASLTEGAKIASGRLF"
BASE COUNT          419 a          787 c          702 g          455 t
ORIGIN      
        1 gctggtcggt gatggctcgc accgattgtc gcgcctgctg caggaccgtg gccggcgcgg
       61 tctcgggcgt accagcgttg aacggcggct ccggcgcgta ggccatgtga agctggatcg
      121 tctgtgccgc ctcttcgccg cgcaactcag ccgcgaggcg caaggcggcg tcgatgccgg
      181 ctgtaacgcc ggcggcaaaa acccacgcgc cgtcgacgac cacccgttgg ttgaccggga
      241 tcgcgccgaa caacggcaac aggtggaacg ccgaccagtg ggtcgttgcc cggcgcccct
      301 tgagcaggcc cgccgccccg cagatcaggg cgcccgtgca caccgaaaaa atgctgcatg
      361 cgcccgcggc ctgcagccgg atccagccca gtacttcggc gtcttccatc agcgcctcct
      421 ggccgtagcc tcccggcaca tgcaggacat ccaggggcgg cgcatcggcc agggtcgcgt
      481 caggcgtaag ccgcaaccct ttcaggtcgc gtacggtcgt tgcggtcttg ccatagatgc
      541 gataggtcgc atttggaatg cgcgacagca cctcgaacgg tcctgtcaga tcgatctgat
      601 cgacgccctc gaaccacagg gagccgtccg tttgcaccgg cgcattcgtg ctcgccgctg
      661 cgggcctgct ggacgggcgc cgcgcagtga ctcactggat ggattgcgca aggctcgcgc
      721 aacgtttccc tgccgtagag gtcgagcccg atccgatttt cgtgcgtgac ggtacggttt
      781 ggacctcggc aggcgtgaca gccggcatcg atctcgcttt ggcgctcgtt gaagaagatc
      841 tcggccgcga ggtggcgctc gccgtagccc gcttcctggt cgtctttctc aagcgtcccg
      901 gcggacaggc gcagttcagc gctgcgctgg cgtcgcaagc cgcagagcat aaattcggcg
      961 cgctgcatca ttggatcacc gaccatttgg gcgacgatct ttcgttgtcg gtcctggccg
     1021 atcaggctgc catgagcgaa cgcagtttca gtcggcacta cgcggaagcg accgggcaaa
     1081 cgccggcccg tgccattgag cggctgagga ttgaagccgc gcgccgcctg cttgcggaat
     1141 cacgcctgcc ggtcaaacgg atcgcgcaac gttgcggctt cggttcggag gaaaccatgc
     1201 gccgcagctt cctgcgtctg ctggccgtca caccgcaaga ctatcgcgca cggttcacgt
     1261 tttaaaacct ttgcacgttc agaataaccg tcccgacgcg attttggctc cttcggtcag
     1321 cgacgccagt tttgcccaca ccacgtcttc cgcgacacgg cgactccccg ccgaggtgtc
     1381 aaagccgcaa tccgttccag cctggacctt ggtcggatca cccaccacct cggccacccg
     1441 ttcgatgcga tcggcgattg tttcgggatg ctcgacgaag ttggtcaccg aatcgatcac
     1501 tccggctacg atgatctggt cctgatcgag cgggaaatcc ttcagcacgc ggtattcatg
     1561 cgcatgccga ggattggcga acggaaacac gaaaccgccg acgttcaatt gccgcaacac
     1621 cggcatcagc tccttcaatt cgacgtcgca atcgtgcggc ccctcgtaat tgccccagca
     1681 cacgtgcaac cgcacccttt cgcgcggaat gttgaccagc gcgccattga tcgtgcgcac
     1741 cacgcgatcg acgaagccaa ggaagtcgtc caacggcttt tcgtgccacg tgtaatgccg
     1801 ctccattgcc aggtcgggac aatccagttg cagcaggaac ccgtgacgaa cgatggtctc
     1861 gtattccact tgcaacgcgc ggcccagagc gttcaggtaa tccatttccg tcgggtaatg
     1921 gtcattgcgc attgccgcgg cgacgatccc cggcgacggc gccgtcagga acggctcggc
     1981 aaacggctgc gccatcttat cgagcgttgc acgaaaatcg gcacattcct gttcgattgc
     2041 ggctcgattt tggtattgca cgtcgccgat tgcggtcggc agaccgtcac gcgcgctgat
     2101 cgccctctgc tgcccaacat cctgggccat atgcgctttg aacagcgggt atttgtcgac
     2161 atcgccacgc ggcggccgat cccagctgcc gccaaatccg gtcatccgtc cccgcacgta
     2221 aagaaagaac gcctcgcgct gctgttcccc gttattgccg atatcgatgc cggcgtctcg
     2281 ctgtttgcga acaacttcct ccatcgcgac atgacccgct tcagcgagtt cagtatcgac
     2341 attctcgcca cgggccttgc gca
//
LOCUS       DATAVD010000889         4234 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3622984, whole genome shotgun sequence.
ACCESSION   DATAVD010000889 DATAVD010000000
VERSION     DATAVD010000889.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4234
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3622984"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(402..767)
                     /locus_tag="VHX39_17090"
     CDS             complement(402..767)
                     /locus_tag="VHX39_17090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992888.1"
                     /translation="MAADPIGDIRLGEVVCRLGFLRPGSTVLPQPGEIGAEGFVHGDD
                     TASCGTLRWFLLGAQCVMHVGHDHLVKHHAVTGENSLDGIAWPECHDCADGGSRAVVP
                     ALLGLAWAFTDALGNLASD"
     gene            complement(949..1830)
                     /gene="hpnD"
                     /locus_tag="VHX39_17095"
     CDS             complement(949..1830)
                     /gene="hpnD"
                     /locus_tag="VHX39_17095"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016767 - geranylgeranyl-diphosphate
                     geranylgeranyltransferase activity [Evidence IEA];
                     GO_process: GO:0016117 - carotenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HEX3992889.1"
                     /translation="MVTSQRQGEPAKPLGVSQADLDAVEALVRKAGTSFYRGMRVLPP
                     DRRHAMYAIYAFCRIVDDIADEDGTLPDKFRRLGEWRVRVAGLYRGEADGPVTRVLLA
                     AVQRFGLREADFAAVIDGMWMDAETVIVAPDLATLDLYCDRVAAAVGRLSVRAFGDSS
                     PAADKVAWSLGRALQLTNILRDIKEDADRGRLYLPAEYLDLYAVPHDPVAALTAASLP
                     TVCARLAADARGRFQEARTQMALCDPAAMKPARLMGETYAAILTCLEQSRWRDPAKRV
                     SLPLWRKLWLLVRYGLA"
     gene            complement(1870..2730)
                     /gene="hpnC"
                     /locus_tag="VHX39_17100"
     CDS             complement(1870..2730)
                     /gene="hpnC"
                     /locus_tag="VHX39_17100"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004311 - farnesyltranstransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HEX3992890.1"
                     /translation="MNDIGLDAPIGNVEAWSGKTSGDENFPVGSHLIARHVRPHMHAY
                     YGFARNADDIADAPDLAPEDKVARLDIMEDVLLGKRLDGSPSATKLRWSLHETGVTPV
                     HATDLLVAFRQDATQRRYETFDELYHYCRYSAVPVGRYVIDLHGEGHGSYGASDALCI
                     ALQILNHLQDCGTDMRTLDRCYLPQTLMRHFGVTPRDLLGPAETPAMRRVFTTVLDRV
                     NRLNLAAQELPDLVRSRRLRAETMFICRLAMRLADRLGKADPLAQRVALTKADGGLSL
                     LRAIGALVWR"
     gene            complement(2727..3845)
                     /locus_tag="VHX39_17105"
     CDS             complement(2727..3845)
                     /locus_tag="VHX39_17105"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008491979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3992891.1"
                     /translation="MLTLLAVLSCLIWCWLLTMHGQFWRAGPVLSSAMPTSTPSVAIV
                     VPARDEAPFIARTVGSLLAQNYPGLVRITVVDDRSADGTGAIVRGLADRRLNVLEGVD
                     RPVGWAGKLWALHQGVAASGEPKYFFLTDADIEHDPPHLASLVAMAERHDLDLVSEMV
                     VLSCNSWAEKALIPAFVFYFQLLYPFAWVNDPLRVTAAAAGGSVLIRRRALLRIGGIE
                     SVRDALIDDVALAGAVKTGGRIFLGHSALARSIRPYPQAADIWRMIARSAYAQLHFSP
                     IVLAGTTLAMALVWLVPVVAVFFGHGLTRFLGLLTWVMFAAAYLPTLGRFGRSLLWAP
                     FLPVIALFYMAATIGSAVNYHHGNGVVWKGRAYRGGAS"
     gene            complement(3845..>4234)
                     /locus_tag="VHX39_17110"
     CDS             complement(3845..>4234)
                     /locus_tag="VHX39_17110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019088854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dehydratase"
                     /protein_id="HEX3992892.1"
                     /translation="LNIVHVDDVAEGHALALERGRIGERYVLGGENLLLKDVLALIAE
                     VSGQRPPRIRLPEALIWPVAWAMEKSAPLTGIAPMMTRDHLKMARKKMFYSSAKAEAE
                     LGYKARPAREAVVDAVAWFRAVGMLRR"
BASE COUNT          901 a         1451 c         1198 g          684 t
ORIGIN      
        1 cgaactcgta acgcaagtcc tgccgttctt cccatgcgtg gaattccgcc agcgtcatcg
       61 gtttgggcag ggcagagctc atgacgcgat gtgtagcagg gctgacctgg ccactccagc
      121 ggtctgagcc gcgcccacgc cgccgcccgt ttcggattga ccgcggacct attgtgtcgg
      181 cggcgccggc atgtccttcc ttcggtcggt ggaggtcata aaacgacctt cggtcgatgg
      241 aggtcataaa acgagcgaac ccagactgaa atccaatcct gaacgcgaac tgcattgacg
      301 cgctcattct gttagatata ttaactgtcg atcaaacccc atcccaaggt gacccactca
      361 tggacacgca aacaggttac ggcctccagg acgtcatcgc ctcaatcgct ggccaggttg
      421 ccgagagcgt cagtgaacgc ccaggcgagt cccagcaacg ccgggacgac cgcgcgcgag
      481 ccgccgtcgg cacaatcatg gcattccggc caggcgatcc cgtcgaggct attctctcca
      541 gtcactgcgt gatgtttcac gagatgatcg tggccgacgt gcatcacaca ttgtgcgccg
      601 agcagaaacc aacgcagcgt gccacacgaa gcggtatcgt cgccatggac aaagccttcg
      661 gcgccaattt cacccggctg aggcaacacc gtgctgccag gccgcaggaa acccaaccgg
      721 cagacgacct cgccgagacg gatatcgccg atcggatccg ccgccaccag tctcaaatcg
      781 aacccaaatc cagggaggcg accgcggccg atcacgagcg atccgaagct gacgccacac
      841 cctcaacctg gcccacatca gcgcaaatgc ctgggcttaa tcgccaggcg aggcgggcgc
      901 tcgatcgtca gacccgcaag cgggattctg gcctgtcccg gcctggcatc atgccagacc
      961 gtaacgaacc aacaaccaca gcttccgcca cagcggcagg ctgacgcgct tcgccggatc
     1021 ccgccagcgg ctttgttcca ggcacgtgag gatcgccgcg taggtctcac ccatcagtcg
     1081 cgccggcttc attgcagccg gatcgcaaag cgccatttgc gtccgcgcct cctggaaacg
     1141 tcctcgcgca tcggccgcca ggcgggcaca cacggtcggc aacgaagctg cagtcagcgc
     1201 cgccaccgga tcgtgcggaa ctgcgtaaag atccagatac tcggccggca aataaagccg
     1261 cccgcggtca gcatcctcct tgatatcccg caggatattc gtcagttgca atgcgcgtcc
     1321 cagtgaccag gcgactttgt cagcggcggg agaactatcg ccgaatgcgc gcacggacag
     1381 acgtccaacc gccgccgcga cgcggtcgca atacagatcg agcgtcgcca ggtccggcgc
     1441 aacaatgacc gtctcggcgt ccatccacat accatcgatg acggcggcaa aatccgcctc
     1501 gcgtaagccg aaacgttgca ctgccgcgag caacacgcgg gtcaccggcc cgtcggcctc
     1561 accacggtac agtcccgcca cccgcacgcg ccactccccc agtcgacgaa acttgtcggg
     1621 caaggtgccg tcttcgtcgg caatgtcatc gacgatgcgg caaaacgcat aaattgcgta
     1681 catcgcgtgc cgccggtccg gcggtaatac ccgcatgcct cgataaaacg aggtgcccgc
     1741 cttgcggacc aaagcctcga ccgcgtccag gtccgcttgc gacacaccca acggcttggc
     1801 cggttcaccc tgtcgttgcg atgtaacaat gcgctggctg gttgcttcag gcaccgatcg
     1861 ggttccgctc tatcgccaca ccagtgctcc gattgcgcga agcagactga gcccaccatc
     1921 cgccttggtc agcgccaccc gttgcgccaa cggatcggct ttgccaagcc gatccgccaa
     1981 ccgcatcgcc agccggcaaa tgaacatcgt ctccgcgcgc aagcgccggc ttcgcaccag
     2041 atccggcaat tcctgggcgg cgaggttcag ccggttcacc cgatccaaca cggttgtgaa
     2101 tacacggcgc atagccgggg tttccgccgg acccaacaga tcacgtggcg tcaccccaaa
     2161 atgccgcatc agggtttgcg gcaggtagca gcggtccaat gtccgcatgt cggtgccgca
     2221 atcctgcaaa tggttcagga tctgcaacgc aatgcacagc gcatccgagg cgccgtagct
     2281 accatgaccc tcgccatgca ggtcaatgac atagcggccg accggtaccg cggagtaacg
     2341 gcaatagtga tacaattcgt cgaatgtctc atagcgccgc tgcgtcgcat cctgccgaaa
     2401 cgccaccagc agatcggtgg catggaccgg tgtcaccccc gtctcgtgca ggctccaccg
     2461 caatttcgtt gcactgggcg aaccatccag ccgcttgcca agcagcacgt cctccatgat
     2521 gtcgagccgg gcaaccttat cttcgggcgc caggtcggga gcatcggcga tatcatcggc
     2581 gttgcgagcg aagccgtaat aagcgtgcat atgcggccgc acgtgacgag cgatcagatg
     2641 cgaaccgacc gggaaatttt cgtcgccgct tgttttgccc gaccacgcct cgacattgcc
     2701 gatcggagcg tcaagtccaa tgtcgttcat gacgcacctc cgcgataggc acgccctttc
     2761 cagacgacgc cgttgccgtg gtggtaattg actgccgatc cgatcgttgc ggccatatag
     2821 aacagtgcga tgaccggcag aaacggagcc cagagcaacg accggccaaa ccggcccaga
     2881 gtgggcagat aggcggcggc aaacatgacc caggtcagca gccccagaaa ccgcgtcagc
     2941 ccgtggccaa agaacactgc cacgaccggt accagccaaa ccagcgccat cgccaacgtg
     3001 gtcccggcca gcacaatggg cgagaagtgc aactgtgcgt acgcggaacg agcgatcatc
     3061 cgccagatgt ccgcagcctg cgggtagggc cgtatcgatc ttgccaacgc tgaatggccg
     3121 aggaaaatcc gtccgccggt tttgacagcg ccagccaggg caacgtcatc gatcaatgcg
     3181 tccctcacag actcgatccc accaattcgg agcaaggccc gccgcctgat cagcacgctg
     3241 ccgcctgccg ctgccgctgt gactcgcaag ggatcattca cccaggcaaa cggataaagc
     3301 aactgaaagt aaaacacgaa ggcggggatc agcgcctttt ccgcccaact gttgcacgac
     3361 aatacaacca tctcggagac cagatccagg tcatgccgtt ccgccatggc cacaaggctc
     3421 gccagatgcg gcgggtcatg ttcgatgtcc gcatcagtca ggaagaagta cttcggctcc
     3481 ccggacgccg ccacgccctg atgcagtgcc cacaatttac ccgcccaccc caccgggcga
     3541 tccacaccct caagcacgtt caggcggcgg tccgcgagcc cgcgcacaat ggcgccggtg
     3601 ccgtctgcgc tacggtcatc gaccaccgta atgcgcacaa gcccaggata gttctgcgcc
     3661 aacaaagaac cgaccgtccg agcaatgaac ggcgcctcgt cacgcgccgg caccacgatc
     3721 gcgaccgatg gagtgctggt cggcattgcg gagctcagta ccggcccggc gcgccagaac
     3781 tggccgtgca tggtcagcag ccaacaccag atcaggcacg acaggaccgc gagcaacgtc
     3841 aacatcagcg gcgcaacatg cccactgcgc ggaaccacgc caccgcatcg accaccgcct
     3901 ctcgcgcagg ccgggcctta taacccagtt cggcctcggc tttggcagac gagtaaaaca
     3961 tctttttgcg cgccatcttc aaatgatcgc gggtcatcat cggcgcgatt ccggtcagcg
     4021 gcgctgactt ttccatggcc catgcgaccg gccagatcag tgcctcgggg agacggatgc
     4081 gggggggacg ctgcccagag acctcggcaa tcagggccag cacgtccttc aacagcaggt
     4141 tctcgccgcc gagcacgtaa cgttcgccga tccggccgcg ttcgagggcc agcgcgtgcc
     4201 cctcggccac gtcgtcgaca tggacgatgt tcag
//
LOCUS       DATAVD010000890         2865 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3623316, whole genome shotgun sequence.
ACCESSION   DATAVD010000890 DATAVD010000000
VERSION     DATAVD010000890.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2865
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3623316"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1144
                     /locus_tag="VHX39_17115"
     CDS             <1..1144
                     /locus_tag="VHX39_17115"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3992893.1"
                     /translation="GPFPPEMLPVGIRSRLIPNVNGLTMHILEAGYEAPSRRCVLLLH
                     GFPELAWSWREVMGTLSQSGYHVIAPDLRGYGRTSGTNPSYDDDLMPWRTINQVRDMM
                     GLLWALGYRSTEAVIGHDFGSTVAAWCALVRPDVFRRMAVMSGPFGGPPDIPFDTDRH
                     PVEAKPDPVFAELAALPRPRKHYHRYYAKRPANADIMNCKQGVHDFLRAYFHHKSADW
                     KQNRPFPLAGWTTTELAKIPTYYIMDLNKTMPETVAEEMPSAAEIAACRWLTEDDLRV
                     YSQEYQRTGFQGGLQNYRVRFENAGQSDLQVYAGRRVEQPSLFVSGASDWGVYQTPGN
                     LQRMRDVVCTNLIGCHLLEGAGHWVQQEKAEEVAKLLIGLLESPTR"
     gene            complement(1343..2470)
                     /locus_tag="VHX39_17120"
     CDS             complement(1343..2470)
                     /locus_tag="VHX39_17120"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3992894.1"
                     /translation="MTRTYDTVDADGHILEPLTLWDDYIDPAFRERRPRFVIDDNGKE
                     RLSVEGKLLGNPRGIGSLGSVGVRQGEVKLDSLKYADGRKGGFDPHARIVDMDLDGID
                     AAFLYPSLGLFTGAVQDPELAAAMCRAYNRWLADYCKPYPDRLFGVAMLPMQSVELAT
                     EELRYVRETLGMRGGFLRPNPYHGKKMLSDPMYEPFWQMAEDLDISIGFHEGSSTAVP
                     TVGVDRFENDRAARHMISHTMEMMLAALSVIWGGVVDRHPRLRVAFLESGGGWIAPWL
                     DRMDRHFDDNGFNDTAPNMRPSELFQRNCWISFEPVENSIAALANYIGPHKIMWATDY
                     PHQDGFFPGAPKMMRDRLGPLSAEAKRQVMAGGSLGFYGLN"
BASE COUNT          569 a          855 c          859 g          582 t
ORIGIN      
        1 aggtcctttc ccacccgaaa tgttgcccgt tggcattcgg tcccgtctca ttcccaacgt
       61 caacgggctc acgatgcata ttctggaggc tgggtatgaa gcgcccagtc gtcgttgcgt
      121 cctgctgctg catgggtttc cggaactcgc ctggtcatgg cgggaggtta tgggaacatt
      181 gtcgcaatcg ggctatcacg tcatagcgcc tgatctgcgc ggttatggca ggacgtccgg
      241 aaccaatccc agctatgatg acgatttgat gccgtggcgc acgatcaatc aggttcggga
      301 catgatgggg ctgctttggg cactcggtta ccgttcgacc gaggctgtca ttgggcatga
      361 tttcggttcc acggtcgccg cgtggtgtgc attggtccgc ccggatgtgt tccgccgtat
      421 ggcagtgatg agtggtccgt tcggcggtcc gcccgatatt ccgttcgata ccgaccgtca
      481 tcctgtcgaa gcaaagccag atcctgtgtt tgctgagctg gccgcactgc cgcggcccag
      541 aaagcactat catcgctact acgccaaacg tccggccaat gccgatatca tgaattgcaa
      601 acaaggcgtg cacgacttcc tgcgcgccta tttccatcac aagagcgcgg attggaagca
      661 aaatcgaccg tttccattgg ccggctggac tacaacggag cttgcgaaga taccgactta
      721 ttacatcatg gatctaaata agaccatgcc ggaaacggtg gccgaggaga tgccgtcagc
      781 cgccgagatt gccgcgtgtc gatggctgac ggaagacgat ctgcgcgttt acagtcagga
      841 gtatcagcgc accggcttcc agggcggcct gcagaactac cgcgtgcggt ttgagaacgc
      901 cgggcaatcg gaccttcagg tttatgccgg tcgcagggtc gagcagcctt cgctgtttgt
      961 ttccggtgcc agcgactggg gcgtttatca gacgcccggt aacctgcagc ggatgcgcga
     1021 cgtggtctgc accaacctga tcggttgcca tcttttggaa ggcgccggtc attgggtgca
     1081 gcaggaaaaa gccgaagagg tggcgaaatt gctgatcgga ttgctggaat ctccaacccg
     1141 gtagtgtcgc actggatctg atcaacaggt ggcaaggcct gatctgcttt ctgccggttg
     1201 cgagtgacga aagggcgctc gatcgtgcta tcagcgatgg ccgtatgccc atccgccgtg
     1261 ccggccaccg ctaaccgcgc cagggtttgc tgcgacgtac gagcagcccg atcacgaaac
     1321 tcccggcaac gaccctctta gctcaattca aaccgtaaaa gccgagtgag ccgcccgcca
     1381 tcacctggcg cttcgcctcg gcggacaatg ggcccagacg gtcgcgcatc atcttgggcg
     1441 cgcctgggaa gaagccgtcc tgatgcggat aatcggtcgc ccacatgatc ttgtgcggac
     1501 cgatatagtt ggccagcgca gcgatgctgt tctccaccgg ctcgaacgaa atccaacaat
     1561 tgcgttggaa cagttcgctc ggacgcatgt tcggcgcggt gtcgttgaac ccgttgtcgt
     1621 cgaagtgccg atccatgcgg tcgagccatg gcgcaatcca tccgccgcca gattcaagga
     1681 aagcaacccg cagccgcgga tggcgatcga caacaccgcc ccagattacg ctgagtgccg
     1741 cgagcatcat ctccatcgtg tgcgagatca tatgccgcgc cgcccgatcg ttttcgaaac
     1801 gatcgacgcc gaccgtcggc acggcggtgc tggagccttc atggaacccg atcgagatgt
     1861 cgagatcttc ggccatctgc cagaacggtt cgtacatcgg gtcgctgagc attttcttgc
     1921 cgtgatacgg gttcggccgc aaaaaaccgc cgcgcattcc aagtgtttcg cgcacgtaac
     1981 gcagttcttc ggtcgcgagc tcgaccgact gcatcggcag catcgcgacc ccgaagagcc
     2041 ggtcgggata tggcttgcag taatccgcaa gccagcggtt gtaggcgcga cacattgcag
     2101 ccgccaactc gggatcctga accgcgccgg taaacaggcc gagacttgga tagaggaacg
     2161 cggcatcgat gccgtcaagg tccatatcga cgatgcgggc gtgcgggtcg aacccgccct
     2221 tgcgcccgtc ggcgtatttc aggctgtcaa gtttgacctc gccctgccgg acgccgacgg
     2281 agcccaggct gccaatgcct cgcggattac cgagcagctt gccctcaacg ctgaggcgct
     2341 ccttgccgtt gtcgtcgatc acgaaccgcg gcctgcgttc acggaacgcg gggtcgatat
     2401 aatcatccca cagagtgagt ggctcgagaa tgtggccgtc ggcgtcgaca gtatcgtagg
     2461 tccgcgtcat tgccttttcc tcccgggtta tggatcccga atcacggtag cgcggcggca
     2521 accgggcggc gagtccgcgc catgatcatg ttccggcgcg cacttgtttg cgctccgcgg
     2581 tgtcataacg gatggagaac gataccgatt tgtttccgca ccggcgcaca cagtgcttga
     2641 cggagacgca caacacgacc gaccattcat ccgctggccg caaagtcggt tcacctcctc
     2701 aaagacagac gctgtctcag gagtgcgctg gtaatgcgac acaggataag cagggaggca
     2761 accaatgtcg gcggactaca acctatgtct tggaacggct ggctggggcg tatggcacag
     2821 tccaaatgcc ggaaaatcat ggacccggca tcgcgccccg tttcc
//
LOCUS       DATAVD010000891         5706 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3623630, whole genome shotgun sequence.
ACCESSION   DATAVD010000891 DATAVD010000000
VERSION     DATAVD010000891.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5706
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3623630"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..386)
                     /locus_tag="VHX39_17125"
     CDS             complement(<1..386)
                     /locus_tag="VHX39_17125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoglycerate dehydrogenase"
                     /protein_id="HEX3992895.1"
                     /translation="MKGLFMDAVDDLASVFARVVRPDDPPVAVNEQGDIPPETLPALL
                     AGYDFVLDDHTRLPADAMRQCTGLRHIIFLGTGARSYMNPEELAELGITVHIIKGYGD
                     IAVAEHTIALMWSAARGLARMDRGMRA"
     gene            496..2325
                     /locus_tag="VHX39_17130"
     CDS             496..2325
                     /locus_tag="VHX39_17130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEX3992896.1"
                     /translation="MPRKSTSLASEQRSSSRSARSFGASGARRSPGVTPSGRKRRSLL
                     RWLLRAGIILTIWGSVVLAAVVLWAAYDLPRPETAMDAERRPALVLQDRNGQTFATYG
                     DLVGEPLRLKDLPPEVPAALIAVEDHRFYQHGALDFIGLARAAWVNLTHLRIVQGGST
                     ITQQVAKTLFLTPERTVRRKIRELLLTIWLERTFTKNEILEIYLNRVYLGSGTWGVDA
                     ASRMYFGISARKVNLWQSAVLAGLPQAPSRYNPRANPAAATARAKQVLAAMQQTGAIS
                     AARAQAAAAQITFPKVTRQDGAWFADWASDQVQSVLPPDRDATVRTTMDQRLQIAAEA
                     ALSTMLDGPGAGAGVGQGAVVVLDAASGAVRVMVGGRDYRDSNFNRAVNAHRQPGSAF
                     KPFVWLTALEDGMTPADTVLDAPIRIGNWQPEDFEREYRGEITLDEALAHSVNTASVR
                     LLLRCGGAKPVAATAARLGITSTLPNNASLALGTGEVGLLELTAAYAPFFNGGFRIVP
                     FAVVPQERPEPVVRPDLASMMASMMTSVVNRGTGKAAAIPGLVVAGKTGTTSDYRDAW
                     FIGYVNGMMIGVWMGNDDNAPMKNVLGGGLPARLFHDVGMLVR"
     gene            complement(2585..5347)
                     /locus_tag="VHX39_17135"
     CDS             complement(2585..5347)
                     /locus_tag="VHX39_17135"
                     /inference="COORDINATES: protein motif:HMM:NF015644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HEX3992897.1"
                     /translation="MRSRRVIVAVAVIVACLIVLSRGSSLVVDWAWFSSIGHGSVFWT
                     IVTAKIALFVTVFAVSSLLLWGNAALALRFTWRRRSRLPAELNPSFANLSLLPGTPAD
                     LLRLISPRIPWRLVVLAVSLAVGVLIAIGESGQWDLALRYLYQTPYGRADPLFGNDIG
                     FYLFSLPAWIAVKDWILLVLAAGAAMAAAIYFVHGDINPDRWPWRIAPAAIGHGSALL
                     AIWFTVKALSYMLDRFLLLYNDNGVVVGANYTDVHVVLPVLWLLAGVAVIAALIAAAN
                     VWRRVYRPAIAASALLFGGSFVLAEVVPTLFERFYVKPSELQLESPYIRSNIDLTREA
                     YNLRQIEVKPFPAEQGLTFRSLENNRGTVNNIRLWDWQPLMDTYAQLQEIRTYYKFLD
                     VDIDRYHIGGSYQQVTIAARELAPSLLSANAQTWVNLHLLFTHGNGVVMSPVTQKSTE
                     GLPNFYLKDIPPVASDDAPVVTEPRIYFGLGASSYVIVKGSTPEFDYPKGADNAYTSY
                     DGADGVSVGGIAWRTLFAWYFDDINILLSSYITDQSKILLYRNVQERVHKIAPFLQLD
                     HDPYVVVSGGRLFWIQDAYTTSDWFPYAQPQTDGDDYIRNSVKVVIDAYNGTTTFYVA
                     DATDPIAATYQRIFPALFKPLDTMPPDLRAHIRYPEDLFDIQALQYRAYHMDAPEVFY
                     NREDLWQYPREPAAPDGNGTNSSRMEPYYIMMRLPGEAHAELFLMLPMVPSQRENMIA
                     WLAARCDLPEYGKLIVYEFPKDKLVYGPFQIDARINQNTEISQQISLWNQMGSRVIRG
                     NLLVIPIENSILYVSPLYLRSESGQLPELKRVIAAYADRVVMQDTLPEALAALFGQAA
                     PTAPPPAANGAAPSGSADARARAALEHYEQAIARLKAGDWSGFGNELDAMRPLLEQLG
                     GNTATH"
     gene            complement(5431..>5706)
                     /locus_tag="VHX39_17140"
     CDS             complement(5431..>5706)
                     /locus_tag="VHX39_17140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional heptose 7-phosphate kinase/heptose
                     1-phosphate adenyltransferase"
                     /protein_id="HEX3992898.1"
                     /translation="LKGPLRPAQPQDARAAILSGLASVDLVCVFDEDTPERLIRAVRP
                     DVLITGGAGGVDEGFAADLVREWGGKVTVADVLPGHSTQATLERIRG"
BASE COUNT         1136 a         1717 c         1785 g         1068 t
ORIGIN      
        1 gcacgcatcc cgcgatccat ccgcgcgagg ccgcgagccg ccgaccacat caaagcaatc
       61 gtgtgctcgg cgaccgcaat atcgccataa cctttgatta tgtgaacggt gatgccaagt
      121 tcggccagtt cctcggggtt catataactg cgtgcgccgg tgcccagaaa aatgatgtgc
      181 ctcagtccgg tgcactggcg catggcatcc gccggcagcc tcgtatgatc atccagcacg
      241 aaatcgtagc cggcgagcag ggctggcagc gtctcgggcg ggatatcgcc ttgttcgttg
      301 accgctaccg gcggatcgtc cggccgcacc acgcgggcaa aaaccgacgc gaggtcgtcg
      361 acggcgtcca tgaacaggcc cttcatctgg tcctccaccg gtctgtggtg gaagtatgcc
      421 gtcgcgcctc gatggcgaca accacactct gggccagacc atgctaaaat gtggcaccga
      481 ttcccgggag acctgatgcc gcgtaaatcc acatcgctgg cctcggagca gcgctcgtca
      541 tcgcgttcgg cccggtcatt cggggcctcg ggcgcgcggc ggtccccggg cgtgacacct
      601 tctgggcgga agcgaaggtc gttactccgg tggctgctgc gagccgggat catcctgacc
      661 atctggggct ccgtcgtgct ggcggcggtg gtgctctggg ctgcctacga tctgccgcgt
      721 cccgaaaccg cgatggacgc cgagcggcgg cccgctttgg tgctgcagga tcgcaatggc
      781 cagaccttcg cgacctacgg cgacctggta ggcgaaccgc tgcggctaaa ggatctgccg
      841 ccggaggtgc cagcggcctt gatcgcggtg gaggaccacc ggttctatca gcacggcgcc
      901 ctcgatttca tcggtcttgc tcgtgcagcc tgggtcaacc tgacacacct ccgcatcgtg
      961 cagggtggtt cgacgatcac ccagcaggtc gcgaagacgc tatttctgac ccccgagcga
     1021 accgtccgcc gcaaaatccg tgaattgctg ctgacaatct ggctggaacg gacgttcacc
     1081 aagaacgaga ttctcgagat ctacctcaat cgcgtctatc tcggttccgg cacctggggt
     1141 gtggacgcag cgtcacgcat gtatttcggt atctctgctc gcaaagtgaa tttgtggcag
     1201 tccgcggtgt tggctggcct gccgcaggcg ccttcgcgct acaatccgcg agccaaccct
     1261 gcggcagcga ctgcacgagc gaagcaggtt ctcgcggcaa tgcagcagac cggtgcgatc
     1321 tccgccgctc gcgcacaggc tgcggcagcg caaattacct tccccaaggt gacccgccag
     1381 gatggtgcgt ggtttgccga ctgggcttcg gatcaggtgc aatcggtgct gcctccagac
     1441 cgcgacgcca cggttcgcac cacgatggat cagcgcctgc aaattgccgc cgaggccgcc
     1501 ctctcgacca tgttggacgg cccaggagcg ggggcgggag tggggcaggg agcggtggtg
     1561 gtgctggacg cggcgagcgg tgccgttcgg gtcatggtcg gcgggcggga ttaccgggat
     1621 agcaacttca accgggcagt gaatgcgcac cgccaaccag gctcggcatt caagccgttc
     1681 gtttggctga cagcgttgga ggacgggatg actccggccg ataccgtgct ggacgcgccg
     1741 attcggattg gcaactggca gcccgaggat ttcgagcgcg aataccgtgg cgaaatcacg
     1801 ctggacgaag cattggcgca ctcggtcaac accgcgtcgg tacggttgct gttgcggtgc
     1861 ggtggcgcga agccggtggc ggcgacggct gccaggttgg ggatcaccag cacgttgcca
     1921 aacaatgcgt ccctggcctt gggcaccggc gaagtgggac tgctggaact gactgccgcc
     1981 tatgcgccat tctttaacgg cgggttccgc attgtgccat tcgcagtggt accgcaggag
     2041 cggccggagc ccgtggtgcg gccggatctc gcttcgatga tggccagtat gatgacgtcc
     2101 gtcgtcaatc gcggcaccgg taaagcggcc gcaattcctg ggctggtggt tgcagggaag
     2161 acgggcacga cgtcggatta ccgggatgcg tggttcattg gttacgtgaa cgggatgatg
     2221 atcggggtat ggatgggcaa cgacgacaac gcgccgatga agaatgtatt gggtggtgga
     2281 ttgccggcga gattgtttca tgacgtaggt atgttggtgc ggtagcacat ctgggggtag
     2341 gccggcccgc gaacggaccg gccgtttacc cctaccgcgt ctcgatagtg accttgattt
     2401 tcggaaaaga atcaccacga taagcagcga gaggagaaga tgtcctacca tcctcttacc
     2461 tccagacgtt aagccggcgg gcctattccc gccggctttt cgattttgat gacgatacgt
     2521 gaataataag ttgacgcgtc gggtgctcgg tccggtactt gtgatttcag ccaacgctcg
     2581 gcaatcagtg cgttgccgta tttccgccaa gctgttccag caacggccgc attgcgtcca
     2641 gttcgttccc gaaaccactc cagtccccgg ccttcaggcg cgcaattgcc tgctcgtaat
     2701 gttcgagtgc ggcgcgggcc cgcgcatccg cgctgccgga tggcgctgcc ccattggccg
     2761 ccggcggcgg ggcagtcggc gcggcctgac cgaacaacgc agccagcgcc tcgggaagcg
     2821 tgtcctgcat gaccactcgg tcggcatacg ccgcgatgac tcgtttcagc tccggcaatt
     2881 ggcctgattc ggagcggagg taaagcggcg acacgtacag gatcgaattc tcgatcggaa
     2941 tgacaagcaa attgccgcga atgactcgcg atcccatctg attccataac gaaatctgtt
     3001 gcgaaatctc ggtattctgg ttgatccgcg cgtcgatttg aaacggcccg taaaccagct
     3061 tgtctttggg gaactcataa acgatgagct tgccgtactc cggcagatcg cagcgtgcgg
     3121 cgagccaggc gatcatgttt tcccgctggc ttggtaccat tggcagcatc agaaacagct
     3181 cagcgtgtgc ctcaccaggc agccgcatca tgatgtagta cggttccatc ctcgaggagt
     3241 tggtgccatt gccatcgggt gccgccggtt cacgcgggta ctgccaaaga tcctcgcgat
     3301 tgtagaacac ctcgggcgcg tccatgtgat aggcacggta ttgcagcgcc tggatgtcga
     3361 acagatcttc ggggtaacga atatgcgcac gcagatccgg cggcatcgtg tctaacggct
     3421 tgaacagcgc agggaaaatg cgctgatagg tcgcagcgat cgggtcggtg gcatcggcga
     3481 cataaaacgt cgtggtccca ttataagcgt cgatcaccac cttgacggaa ttgcggatat
     3541 aatcatcgcc atcggtctgg ggttgcgcat aggggaacca gtcgctcgtc gtgtaagcgt
     3601 cctggatcca gaacagccgt ccgccgctga ccacgacgta gggatcgtga tccaattgca
     3661 ggaaaggcgc gattttgtgc acgcgttcct ggacgttgcg gtaaagcaat attttgcttt
     3721 ggtcggtaat gtaactgctc agcaggatat tgatgtcgtc gaaataccag gcgaacagcg
     3781 tccgccaggc gatgccgcca accgagacgc catcggcgcc gtcgtaactg gtgtaggcat
     3841 tgtcggcgcc tttgggatag tcgaactccg gcgtcgagcc tttgacgatc acgtagctgc
     3901 tggcgcccag gccgaaatag atacgcggtt cggtcaccac gggcgcatcg tcggaggcca
     3961 ccggcggaat gtccttcaga tagaaattcg gcagtccctc cgtggacttc tgcgtgaccg
     4021 gagacatcac gacgccgttg ccgtgggtaa acagcaaatg cagattgacc caggtctgag
     4081 cgttggccga cagcaggctc ggtgccagct cgcgcgcagc gatcgttacc tgttgatacg
     4141 acccgccgat atggtagcga tcaatatcga catcgaggaa tttatagtac gtgcggattt
     4201 cctgcagctg cgcataggtg tccatcagcg gctgccagtc ccaaagccgg atgttgttga
     4261 cggtgcctcg gttgttctcc agtgaccgga aggtcagtcc ctgctccgcc ggaaacggct
     4321 tcacctcgat ttgccgcagg ttgtacgctt cgcgcgtgag gtcgatgttg cttcggatat
     4381 acggcgattc caactgaagc tcgcttggtt ttacataaaa ccgctcgaac agcgtaggga
     4441 ccacctcggc gagcacgaac gacccgccga acaacaaggc tgacgccgca atggctgggc
     4501 gataaacccg tcgccacaca ttcgccgctg cgatcagggc ggcaataacg gcgactcctg
     4561 ccagcagcca aagcaccggc aggacgacgt ggacatcggt gtaattggca ccgaccacca
     4621 cgccgttatc gttgtacagc agcagaaagc ggtccagcat gtaggacaac gctttcaccg
     4681 taaaccaaat ggccaacaga gcggagccgt ggccgatcgc ggccggcgca atgcgccagg
     4741 gccatcggtc gggattaatg tcgccatgga cgaaatatat tgcggccgcc atcgcagcac
     4801 cggcagcgag aaccagcaat atccagtcct tcaccgcgat ccaggccggc agtgagaaca
     4861 aatagaagcc aatgtcgttg ccgaacagcg ggtcagcccg gccgtatggc gtctgataga
     4921 ggtaccgcaa ggcgaggtcc cattgtccag attcaccgat tgcgatcagc acgccaacgg
     4981 ccagcgacac cgccagaacc accaggcgcc acggtatccg cggtgaaatc aggcgcagca
     5041 ggtcagcggg cgtcccgggc aagagcgaca aattggcaaa gctgggatta agttctgccg
     5101 gtaggcgtga tcgccgccgc caggtgaacc gcagggccag tgcggcattg ccccagagca
     5161 gcaggctcga taccgcgaaa actgtgacga acaaagcgat tttcgcggtg acgatggtcc
     5221 agaacacgct gccatgaccg atcgacgaga accacgccca atcgaccacg aggctgctgc
     5281 cgcggctcag tacgatgaga caggccacga tgacggcgac cgccacgatg acgcgtctcg
     5341 agcgcatgtt tttcctcccg cagcgcgtta cgcacgagcg agagtgacag caagggagag
     5401 ttttgcaagc agccggcgac ggcccagaat ctacccgcga atgcgctcca gggtcgcctg
     5461 tgtcgagtgg cccggcagca catctgcgac ggtaacctta ccgccccatt cgcgcaccag
     5521 atcggcggcg aagccttcgt cgaccccccc ggcgccacct gtgatcagca cgtcgggccg
     5581 caccgcacgg atcaaccgct cgggcgtgtc ctcatcgaaa acgcaaacca gatcgaccga
     5641 cgccaggccc gacaaaatcg ctgcccgcgc gtcctgcggc tgcgccggcc gcagcggtcc
     5701 cttcag
//
LOCUS       DATAVD010000892         4877 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3623676, whole genome shotgun sequence.
ACCESSION   DATAVD010000892 DATAVD010000000
VERSION     DATAVD010000892.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4877
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3623676"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..678)
                     /locus_tag="VHX39_17145"
     CDS             complement(1..678)
                     /locus_tag="VHX39_17145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992899.1"
                     /translation="MAIVSRSLCGLLVLISTATAATQDHIGGWVLACSGQSACRLRAE
                     KRFVDKAGITAELEILADGPSLVPVLALRGLSTEALMTAATMGSVDAWMQLDGGPRET
                     LDCAPAFDGYFCTPRGRAARALAAELPTARTVTMRTQARVTGMTPLPAQQTSLALTGT
                     RQALIRLRAAGTQPVPDANFAAATRLLPQASSGTIAALADKALRAAGYPNGVGDLSGL
                     VAKYLKK"
     gene            732..1760
                     /locus_tag="VHX39_17150"
     CDS             732..1760
                     /locus_tag="VHX39_17150"
                     /EC_number="3.4.13.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014105405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HEX3992900.1"
                     /translation="MNDAIQPDALSIHRTIVTLDTHIDIPWPSGPDPFQDGPRRVDLP
                     KMIRGGLSAACFVAYVPQVARSPASEDAAYARAAAMLNQIGGMELVPSAIPMRIASRA
                     DAIVAAKQDGVLAIVPCVENGFAVGADLSRIAEFRARGAIYMTMTHNGHNALADSCNP
                     RRDLGDRETEHGGLSALGRAAVAAMNRVGMLVDVAHTSRDTMVQAAEESRSPIVSTHS
                     CVSAICDHSRNMTDWQLDVIRDVRGVIQITAVAAFLKPNAKPDEVTVSDFADHIDYAV
                     KRIGIDHVGISSDFDGGGGFSDWHDASQSPNITVELVRRGYDRGALEKLWGGNFLRVM
                     RVAEGLAQ"
     gene            1760..2599
                     /locus_tag="VHX39_17155"
     CDS             1760..2599
                     /locus_tag="VHX39_17155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3992901.1"
                     /translation="MRTVALPGGETVPALGQGTWYMGERRGEAAKEADALRLGVDLGM
                     TLLDTAEMYASGGAETVVAQAIHGIRDRVFIVSKVLPQNASRAGVAAACERSLKRLGT
                     DRIDLYLLHWRGGHPLAETVGAFQALKAAGKIRYWGVSNLDTADMEELIAVPGGSACA
                     ANQVLYHPDSRGIEFDLLPWCADHKIPVMAYSPLGHHVRRLLGSSALQAVAARHGATP
                     AQVAIAWGMRGSNVISIPKAADLAHVRENAAAGEITLTAEDLTAIDAMHRPPSRKVGL
                     DLL"
     gene            complement(2596..3651)
                     /locus_tag="VHX39_17160"
     CDS             complement(2596..3651)
                     /locus_tag="VHX39_17160"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3992902.1"
                     /translation="MPIITSALAGLAFVGCAITSATQPPTAQPRRRETVINGKRIKTI
                     DVHAHCIVPAAATLINHPLEAPGLLMADTSTRIAAMDAQGIDVEALSINPYWYRAERD
                     VAAELIKVQNETLVEFCAASPDRFVAFATASLQHPELAAEQVEYAVKKLGFRGVGVAG
                     SVAGEELTNPRFHPFWAKCEELGVLVFLHPLGTRELEPSGRLAGSGLLTNTIGNPLET
                     TIALSHLIFEGTLDRFPGLKICAAHGGGFLPSYANRSDAVTRCFPDRVGPLPKKSPTA
                     YLKDGQLFFDTIVFTPEALRHLIAETGASQIMIGTDYPFPWTSTEVDLVLNTPGLTDD
                     ERIAILGGTAAKLLGIS"
     gene            complement(3694..4659)
                     /locus_tag="VHX39_17165"
     CDS             complement(3694..4659)
                     /locus_tag="VHX39_17165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate desuccinylase/aspartoacylase
                     family protein"
                     /protein_id="HEX3992903.1"
                     /translation="MGSHHTPAALPEFKVRICRPDISPWVAGNTGIAGITTLDSHRPG
                     PHVALFSLMHGNELAGAIVLDRLLRAGLTPTRGKLSFGFLNLTAFDRFDPLRPTASRF
                     IDEDMNRVWDETILLGPRHSIELDRAREIRYFIDSVDVLLDLHSMLWPSEALILSGTP
                     AKGQSLAKAIGTPPLVVADHGHVNGRRLIDFPRFSSAETPYAACLVEAGQHWEQATID
                     TIAACVAGLLRHLDIVAPDAPLPPVPAPAAARIATVTTAVTAMTSSFAFVQTFRGGDI
                     IPRRDTLIAMDGETEIRTPHDNCLLVMPSLRPSRGHTAVRLGRFE"
     gene            complement(4673..>4877)
                     /locus_tag="VHX39_17170"
     CDS             complement(4673..>4877)
                     /locus_tag="VHX39_17170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX3992904.1"
                     /translation="KHVVGSNSAGKVAYGTEGGFYENAGIPTIICGPGDIAQAHQPDE
                     WIAESELDACDKFIRRLADRLLV"
BASE COUNT          826 a         1440 c         1701 g          910 t
ORIGIN      
        1 tcacttcttc aggtatttcg caaccagccc cgacagatcg cccaccccgt tcggatatcc
       61 cgccgccctc agcgccttgt ccgccagtgc ggcgatcgtg ccggatgacg cttgcggcag
      121 caggcgcgtc gcagcggcga aattcgcatc gggcaccggc tgcgtccccg cggccctcag
      181 ccggatcaga gcctgccgtg tccctgtcaa cgccagtgat gtctgctgcg ccggcaacgg
      241 cgtcatcccg gttaccctcg cctgcgtccg catcgtgacg gttcgcgctg tcggcaactc
      301 tgccgccagt gccctcgcgg cgcggcccct cggtgtgcag aaatatccgt cgaacgccgg
      361 cgcgcaatcc aacgtctcac gcgggccgcc atccagttgc atccaggcgt cgaccgatcc
      421 catcgtcgcg gccgtcatca gcgcctcggt cgacagcccg cgcagcgcca gcacgggcac
      481 cagcgacggc ccgtccgcca ggatttccag ttccgcggtg atcccggcct tgtcgacgaa
      541 ccgtttctca gcgcgcagcc ggcatgccga ttgacccgaa caagccagca cccaaccgcc
      601 gatatggtct tgcgtcgcag cggtggcggt gctgatcaac accagcaatc cgcacagtga
      661 acgggacact atcgccattt tgtccttccg agcctcttcc gtgacgcgcg gttatctgta
      721 agcgtgtggg catgaacgac gccatacaac ctgacgcact ctccatccat cggaccatcg
      781 tgacgctgga tacgcatatc gatattccct ggccctcggg tcccgacccg ttccaggatg
      841 gtccacggcg cgtggatttg ccaaagatga ttcgcggtgg cctgagtgcg gcctgttttg
      901 tggcctatgt gccgcaagtg gcgcggtcgc ccgcctccga ggacgcagcc tatgcgcggg
      961 cggcggccat gctgaaccag atcggtggca tggaactggt gccgtcggcg attccgatgc
     1021 ggatcgcgag tcgagccgac gcgatcgtcg cggccaagca ggacggcgtg ctggccatcg
     1081 tgccttgcgt cgagaacggc ttcgcggtgg gggcagattt gtcgcgcatc gccgaatttc
     1141 gcgcgcgcgg ggcgatttac atgacgatga cgcataacgg gcacaacgcg ctggcggatt
     1201 cctgcaaccc tcggcgtgat ctgggggatc gggaaaccga acatggcggg ttgtcggcgc
     1261 tggggcgggc ggcggtggcg gcgatgaacc gggtcggcat gctggtggat gtggcgcaca
     1321 cctcccgcga cacgatggtg caggcagcgg aggaatcgcg gtcgccgatc gtttcgacgc
     1381 attcctgtgt cagtgcgata tgcgatcatt cccgcaacat gacggattgg caactggacg
     1441 tgatccggga cgtgcgcggg gtgatccaga tcaccgctgt cgccgcgttc ctgaagccga
     1501 atgccaagcc ggacgaagta accgtgtccg atttcgccga tcatatcgac tacgcggtga
     1561 agcggatcgg gatcgaccat gtcgggattt catccgactt cgacggtggc ggcggattct
     1621 ccgactggca cgatgccagc cagagtccga acatcaccgt ggaactcgtg cggcgcggct
     1681 atgaccgggg tgcgctggag aagctgtggg gcggtaattt cctccgggtg atgcgcgtgg
     1741 cggaagggtt ggcacagtga tgcgaacggt cgcactgcca ggcggcgaga cggttcccgc
     1801 gctcgggcag gggacctggt acatgggcga acggcgtggc gaggcggcca aggaagccga
     1861 tgcgctgcgg ctgggcgtcg atctggggat gacgctgctg gatacggcgg agatgtatgc
     1921 gtccggtggg gcggagacgg ttgtcgcgca ggcgatccac ggcatccggg accgggtttt
     1981 catcgtcagc aaggtgctgc cgcagaatgc ctcccgcgcc ggtgtggccg cggcgtgcga
     2041 gcgcagtttg aagcggttgg ggacggatcg gatcgatctg tatctgctgc actggcgcgg
     2101 cgggcatccg ttggcggaaa cggtcggggc gttccaggca ctgaaggcgg cggggaaaat
     2161 ccgttattgg ggggtgtcga acctggacac cgccgatatg gaagaattga ttgcggtacc
     2221 gggcggatcg gcgtgtgcgg ccaatcaagt gctgtatcat cctgacagca gggggatcga
     2281 gttcgatctg ctgccttggt gtgccgacca caagattccg gtgatggcgt attcgccgct
     2341 ggggcatcat gtgcggcggt tgctggggtc ctcggcattg caggcggtgg ccgcacggca
     2401 tggcgcgaca ccggcgcagg tcgcgatcgc ctggggaatg cgtggcagca acgtcatttc
     2461 catcccgaaa gcggctgacc tggcgcatgt gcgggagaat gccgcggctg gggagatcac
     2521 gctgacggcg gaagatctga cggcgatcga tgcgatgcat cggccgccgt cacgcaaggt
     2581 cgggttggat ttgctttagc tgatgccaag cagtttggcc gcggtgccgc cgaggatggc
     2641 gatgcgctcg tcgtcggtca gtcccggggt gttgagcacg aggtcgactt ccgtgctcgt
     2701 ccacgggaac ggatagtccg ttccgatcat gatctgactg gcgccggttt ccgcgatgag
     2761 gtgacgcagt gcctcggggg tgaaaacgat cgtgtcgaag aagagttgac cgtccttgag
     2821 ataggcggtc gggcttttct ttggcagcgg gccgacgcga tcggggaagc aacgggtgac
     2881 cgcgtcggag cggttggcat aggacggcag gaagccgccg ccatgtgccg cacagatctt
     2941 caatccgggg aagcggtcga gcgtgccctc gaagatcaga tgcgacagcg caatggtggt
     3001 ttcaagcgga ttgccgatcg tgttggtcag caggccactg ccggcgagcc ttccgctggg
     3061 ttccagttca cgggtaccga gcggatgcaa gaagaccagg acgccgagtt cttcgcactt
     3121 cgcccagaac ggatggaagc ggggattggt gagttcctcg ccggcgacgc tgccggccac
     3181 accgacaccg cggaagccaa gcttcttgac cgcgtattca acctgttcgg cggcaagttc
     3241 gggatgttgc agcgatgcag ttgcaaacgc aacgaaccgg tcggggctgg cggcgcagaa
     3301 ttccaccagc gtttcgttct ggaccttgat caactcggcg gcaacatcgc gttcggcgcg
     3361 gtaccagtac ggattgatgc tgagcgcttc cacgtcgatg ccctgcgcgt ccatcgcggc
     3421 gatgcgggtg ctggtgtcgg ccatcagcag gcccggggct tccagcggat ggttgatcag
     3481 cgtcgcggcg gccggaacga tgcaatgggc atggacgtcg atggtcttga tgcgcttgcc
     3541 gttgatcacg gtttcgcggc ggcgtggttg cgcggttggc ggctgggtag cgctggttat
     3601 cgcgcagccg acgaacgcga gcccggccag ggcgctggta atgatgggca tgcaggtttc
     3661 tccccttgat ggatttttgg attgtttgtg tgcctactcg aaccgtccca accgcactgc
     3721 cgtatggcct cggcttgggc gcaggctggg catcaccaga aggcagttgt cgtgcggcgt
     3781 gcggatttcg gtttctccgt ccatcgcgat cagcgtatcg cggcggggga tgatatcgcc
     3841 gccccggaaa gtctgcacaa aggcgaagct ggaggtcatc gccgtcaccg cggtggttac
     3901 cgttgcgatg cgtgccgccg ccggggcggg gacgggcggc agcggcgcgt ccggcgcgac
     3961 gatatccaga tgccgcagca ggccggccac gcacgccgct atggtatcga tggtggcctg
     4021 ttcccagtgc tggccggcct cgaccagaca ggcggcatag ggtgtctcgg cgctggaaaa
     4081 ccggggaaag tcgatcaggc gccggccgtt gacgtgacca tgatcggcca ccaccaaggg
     4141 gggcgtgccg atcgccttcg ccagggattg tcccttggcc ggggtgccgc tgaggatcag
     4201 cgcttcggac ggccacagca tcgagtgcaa gtccagcagc acatcgactg aatcgataaa
     4261 ataacgaatc tcccgagccc ggtcgagttc aatggaatgg cgggggccga gtagtatggt
     4321 ttcgtcccag actcggttca tgtcttcgtc gatgaagcgc gacgcggttg gccgcagggg
     4381 gtcgaaacga tcgaatgcgg tcaggttcag gaagccgaac gataattttc cgcgtgtagg
     4441 cgtcaggccg gcccgcagca ggcgatccag cacgatggcg ccggcgagtt cgttgccgtg
     4501 catcagcgag aacagcgcca cgtggggccc cggccggtgc gagtccagcg tcgtgatgcc
     4561 ggcgatcccc gtattgccgg ccacccatgg ggaaatatca ggccggcaga tacggacctt
     4621 gaattctggc agcgcggcag gggtgtggtg ggaacccatc gcttatcttg gatcagacca
     4681 gcagccggtc cgcaagacgg cggatgaatt tatcacacgc gtccagttcg gattcggcga
     4741 tccattcgtc cggctgatgc gcctgggcga tgtcgccggg accgcagatg atggtcggga
     4801 tgccggcatt ttcgtagaaa ccgccctcgg tgccataggc gaccttgccg gcgctgttgg
     4861 atccgacgac gtgtttc
//
LOCUS       DATAVD010000893         2871 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1204556, whole genome shotgun sequence.
ACCESSION   DATAVD010000893 DATAVD010000000
VERSION     DATAVD010000893.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2871
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1204556"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..555
                     /locus_tag="VHX39_17175"
     CDS             <1..555
                     /locus_tag="VHX39_17175"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3992905.1"
                     /translation="IGGIATPSFWIGIMSILLVLDLSAAITGTPWMPPIDYVPIWKDP
                     IRNLSMAFLPAVTVGYRYAAVSMRMTRSTMLEVMREDYIRTARAKGLISKLIINRHAL
                     KNALLPVVTVIGIEFAFLIGGLVVTEQVFNLNGVGRLFVQAVQNQDYTLTQALVMLTV
                     TVFVVTNLCVDLLYAWLDPRIRFA"
     gene            569..1462
                     /locus_tag="VHX39_17180"
     CDS             569..1462
                     /locus_tag="VHX39_17180"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3992906.1"
                     /translation="MSVSATTLTAEPDQIRRGTWRTVLTFCRRQPLGTFGMVLVIIVA
                     IAGLGANLIAPYSPTANDFAAMTEAPSWAHWFGTDQFGRDLLSRIIFGARTALLVGLT
                     SATVGGVAGLVLGVGSAYFGGVIDLVLQRVLDVLMAFPLIIMALAVVAIFGTGVQNVI
                     IAITIPLIPRCARVVRSSALAIREIPYVDAARACGFGHTRIILRHMAPNVVAPFLIMI
                     TAFVGQAILAEASLSYLGLGVQEPVPAWGLMLQGGAEEYASTAPWIAIFPGVAIMLSV
                     LGINLFGDALRDELDPKLRNR"
     gene            complement(1448..1912)
                     /gene="aroQ"
                     /locus_tag="VHX39_17185"
     CDS             complement(1448..1912)
                     /gene="aroQ"
                     /locus_tag="VHX39_17185"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HEX3992907.1"
                     /translation="MSRLVYVLNGPNLNLLGKRQPHIYGHETLADVERDCRALAAELG
                     LELRFHQSNREYEIIDWIHEARETAGGIVINPAAFTHTSVAVLDALNTFDAPVIEIHI
                     SNVHKREEFRHRSFVSLRADGVIAGCGTQGYLLALRRVGRLIDKKAASSPVA"
     gene            2127..2570
                     /locus_tag="VHX39_17190"
     CDS             2127..2570
                     /locus_tag="VHX39_17190"
                     /inference="COORDINATES: protein motif:HMM:NF014373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HEX3992908.1"
                     /translation="MAIPGDLHGITATIVAALLGAAIGAEREWRRHPGGLRSCALVAA
                     AACVFARLAIAYGGGSPGAALGAIATGIGFLGAGVILRDGVHIRGLSTAATFWAVAAI
                     GTAAGVLEYAQAVTLTVVVFFAHVVLRPLSGWIERKAPPEDDRPH"
BASE COUNT          461 a          969 c          902 g          539 t
ORIGIN      
        1 atcggcggca tcgccacacc gtcgttctgg atcggcatca tgtccatcct gctcgtgctc
       61 gatctcagcg ccgccatcac cggcacgccc tggatgccgc cgatcgacta tgtgccgatc
      121 tggaaagatc ccatccgcaa cctgtccatg gcattcctgc ccgccgtcac cgtgggatac
      181 cgttacgccg ccgtcagcat gcggatgacc cggtccacca tgctggaagt gatgcgggag
      241 gattatatcc gcaccgctcg ggcgaagggg ttgatcagca agctgatcat caaccggcac
      301 gcgctgaaga acgccttgct gccggtggtc acggtgatcg gcatcgagtt tgccttcctg
      361 atcggcggcc tggtggtgac cgaacaggtg ttcaacctga acggcgtcgg ccggctgttc
      421 gtgcaggcgg tgcaaaacca ggattatacg ctgacgcagg cgctggtcat gctgacggtg
      481 accgtcttcg tcgtgaccaa tctctgtgtc gatctgctgt acgcgtggct cgatccgcgc
      541 attcgtttcg cctgacggga acacgatcat gtcggtatcc gcgaccacgc ttacggccga
      601 accggaccag atcaggcgag gcacctggcg cactgtcctg accttctgcc ggcgccagcc
      661 actgggcacg ttcggcatgg tgctggtgat catcgtcgcc atcgccgggt tgggcgccaa
      721 cctgatcgca ccctacagcc ccactgcgaa cgacttcgcc gcgatgacgg aggcaccaag
      781 ctgggcccat tggttcggaa ccgatcagtt cggccgggac ctgctgtcgc gcatcatctt
      841 cggcgctcgc acggccctgc tggtgggcct gacctcggcc acggtcggcg gcgtcgccgg
      901 gttggtgttg ggcgtgggta gcgcctattt cggcggtgtc atcgatctgg tgctgcaacg
      961 cgtgctggat gtgctgatgg cgtttccgct gatcatcatg gcgctggccg tggtggcgat
     1021 cttcggcacc ggcgtgcaga acgtgatcat cgccatcacc atcccgctga tcccgcgctg
     1081 cgcccgcgtc gtccggtcat cggccctggc gatccgtgaa ataccctacg tcgatgccgc
     1141 ccgcgcctgc ggcttcggac acacgcggat catcctgcgg cacatggcgc cgaacgtcgt
     1201 cgcacccttc ctgatcatga tcaccgcctt cgtcggtcag gcgatcctgg ccgaggcgtc
     1261 attgtcctat ctcggccttg gcgtgcagga accggtgccg gcctggggct tgatgctgca
     1321 gggcggcgcc gaggaatacg cctccaccgc cccgtggatc gccatcttcc ccggtgttgc
     1381 gatcatgctg tcggtgctgg gcatcaacct gttcggcgac gccctgcgcg acgaactgga
     1441 cccgaagcta cgcaaccggt gacgacgcgg ccttcttgtc gatcagccgg cccacccgcc
     1501 gcaacgccag cagataaccc tgcgtgccgc agcccgcgat caccccgtcc gcgcgcaacg
     1561 acacgaacga gcggtgcctg aactcttccc gcttatgcac attggaaatg tggatctcga
     1621 tcaccggcgc atcgaacgtg ttcagcgcat ccaggaccgc caccgaggta tgggtgaacg
     1681 ccgccgggtt gatgacgatg ccgccggcgg tttcccgagc ctcatggatc cagtcgatga
     1741 tctcgtattc ccggttactc tggtgaaacc gcaattccag tcccagttca gccgccagcg
     1801 cccggcaatc gcgctcgaca tcggccagcg tctcatggcc gtagatgtgc ggctggcgtt
     1861 tgcccaacag attcaggttc ggaccgttca ggacatagac aaggcggctc atgcgacgtt
     1921 tcctttttcc gatgcggcga atatcgcccg gccggacgat atagcaaacc gcgccgccgg
     1981 caggacggtc cggcccgagg cacccgatgc ccggccctcg acggaacaac cggacgggcc
     2041 gtagggtgcc ggcatggatc acctccaaga cgattcgatg accgcgacgg gctcgcccag
     2101 gcccaggacg cggcgttcct gatcgcatgg cgatccccgg cgacctgcac ggcatcaccg
     2161 ccacaatagt cgccgcactg ctcggtgccg ctatcggagc ggagcgggaa tggcggcgcc
     2221 atcccggagg gctacggtcc tgcgccctgg tggccgcggc tgcctgtgtc ttcgcccgcc
     2281 tcgctatcgc ctatggcggc ggcagcccgg gtgccgcgct gggagcgatc gccaccggca
     2341 tcggcttcct gggggccggc gtcattctgc gagacggcgt ccatatcagg ggcctatcca
     2401 ccgccgccac cttctgggcg gtggcggcga tcggcacagc cgcgggggtg ctggaatatg
     2461 cccaggccgt gacactgacc gtggtcgtct tcttcgccca tgtcgtgctg cgtccactgt
     2521 ccggctggat cgaacgcaag gccccacccg aggacgaccg cccgcactag agtgtgatcg
     2581 cctgaggccg caggctggaa ggcgtgaatc ataccaatcg cccttgatgt taacccatcg
     2641 gcagcgccgt gcaaccgcca tggcgagcac aggctcgccg tccatgtctt tgtttccgct
     2701 cgtaaaaggc gtggataccg gcatgcgccg gcatgacgga cggggtcaac cgaagagtct
     2761 gcatcagcgc cggttggggt aactgctcca ggggaggcac ggctgcctgt gcccgtcacg
     2821 atcgccttcc tagtcgtcca ggaaactccg tagtttccgg ctgcggctcg g
//
LOCUS       DATAVD010000894         4419 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2878159, whole genome shotgun sequence.
ACCESSION   DATAVD010000894 DATAVD010000000
VERSION     DATAVD010000894.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4419
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2878159"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..543
                     /locus_tag="VHX39_17195"
     CDS             <1..543
                     /locus_tag="VHX39_17195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I poly(R)-hydroxyalkanoic acid synthase"
                     /protein_id="HEX3992909.1"
                     /translation="NYLLGNDPFPFDLLYWNADSTRMPARMHSFYLRKMYQENLLCVP
                     GGIELAGVPINLGKIKTPAYFLSTREDHIAPWKSTYRGTQLLGGPKRFVLAASGHIAG
                     VVNSPDGGKYNHWINEDLPPDPDEWFKGATELAGSWWPDWHRWICAHGKAPVPAREPG
                     GGKLNSIEEAPGSYVKVRLS"
     gene            complement(560..1456)
                     /locus_tag="VHX39_17200"
     CDS             complement(560..1456)
                     /locus_tag="VHX39_17200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3992910.1"
                     /translation="MADPQVAALREMLAQRPKVTDIAERRRGMDALAKVYPTAGDIVV
                     EKVSANGVPAEWTSAPGADTRRAVLYFHGGGYVFGSLDSHRHVTSEIARDIGGRTLAL
                     HYRLAPEHPFPAPVEDAVAAYRYLLAQGIAPANIALAGDSAGGGLVVSTLVAIRDAGL
                     AQPSCGWCISPWVDMEAIGGTMTSNASRDPTVQKDGIMEIAGHYMGGADPRSPLASPI
                     YADLRGIAPLYIQVGAVETLLDDSTRLASVAGAADVPVTLEVWPEMPHVWHLFHPQLA
                     AGRRAITAGARYVRAAMEGRPV"
     gene            1600..2853
                     /locus_tag="VHX39_17205"
     CDS             1600..2853
                     /locus_tag="VHX39_17205"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX3992911.1"
                     /translation="MNAPVDVDLKALANTIPLEDLDPSDPRIFYEDAWQPYFERLRRE
                     APVHRVKDSPYGPYWSVAKYKDIIQVEVNHKIFSSSDEVGGIMINDAPKGMERTSFIR
                     MDPPEHDEQRREVSSTVNPVTLAKMEDLIRTRTNMVLDKLPRNETFNWVEHVSIELTS
                     MMLATLFDYPIDDKLRLIKWSDMFICDINAPDAPVKSEAERFAKQMEFAEYMNVFWEE
                     RAKKPKSFDVLSILAHGETTKNMTLREKMGVLILFLVGGNDTTRNSMTGGLWGLSQFP
                     DQFQKLRENPELVTGMIPEIVRWQTPVIHMRRTATEDFELRGQQIKAGDKVVIWYISG
                     NRDEEHIENPNQFIIDRARPREHMSFGFGIHRCLGNRLAEMQLKILWEEVLRRDLKIE
                     VLDKPVYAYSNFLHAIRDLPVRIAA"
     gene            2940..4409
                     /locus_tag="VHX39_17210"
     CDS             2940..4409
                     /locus_tag="VHX39_17210"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEX3992912.1"
                     /translation="MSATRSVLARTVRGAGWVIAWRLGMRLLGLISTLILVRLLAPAD
                     FGLLALAASFAQTVDGMMMLGTEEAVIRQTAPDRHVYDTAWTLNVLRGLTVTAIVLLS
                     AGPVARFFGDPRLVTVLIVIALPPLLDGLSNIGTVDFRREMQFQKEFAIMVVPKFFGI
                     VATLTAVFIHPSYTALLYGIATNQSLRSAMSYVMHPFRPRFSLRAWRGLIGYSLWTWL
                     LSLAVLLRNRSDTLLLGRLANSTAVGVYSVGAEVAALPTSELVEPLCRASFAGFAAAN
                     REGVSVTETFLRLMSSAVVVTLPVGVGLALVAAPLVRLAFGPGWDGAVPVLRVLGLAG
                     IMTVFGQISLHLMSAHSLLGRLTFVALAGAVLRIVLLLLLIPPFGVAGAAWAAAIATC
                     VDQGATLIMALRHLRVRLRAFIGQIVRPMLAVSTMAIAVLATGSWHALDGDVVWTLAV
                     QATVGGIVYTVVLLATWIAAGRPDGPEADSVRAIRRKVA"
BASE COUNT          845 a         1324 c         1381 g          869 t
ORIGIN      
        1 aattatctgc tcgggaatga tccgtttccg tttgatctgc tgtactggaa cgccgattcg
       61 acccggatgc cggcgagaat gcacagcttc tacctgcgca agatgtatca ggagaacctg
      121 ctgtgcgtac cgggcgggat cgagctggcc ggggttccga tcaacctggg gaagatcaaa
      181 accccggcat atttcctttc gacacgggaa gatcacatcg cgccgtggaa atcgacctat
      241 cgcggtaccc agcttttagg cggaccgaag cggttcgtgc tggcggcgtc cggacatatc
      301 gccggcgtgg tcaattcgcc cgatggcggg aaatataacc attggatcaa tgaagatctg
      361 ccacccgatc ctgacgagtg gttcaagggt gcaacggaat tggccggatc gtggtggccg
      421 gactggcacc gctggatctg cgctcatggc aaagccccgg tcccggcgcg agaaccgggc
      481 ggcggcaaat tgaactcgat cgaggaagcg ccaggcagct acgtgaaggt gcggctgagc
      541 tgacgcttcc ggtttaaacc tagaccggcc gcccctccat cgcagcacgg acgtaccggg
      601 ccccggccgt gatcgcccgc cgtccggcag cgagttgtgg atggaacaga tgccagacgt
      661 gcggcatttc cggccacacc tccagcgtca ccggaacatc ggccgcgccc gcaacgctcg
      721 ccaaccgggt tgagtcgtcc agcagcgttt cgacagcgcc tacctggatg tacaacggcg
      781 cgatgccgcg caaatcggcg tagatcggtg acgccagcgg cgagcgcgga tcggcgccgc
      841 ccatataatg cccggcgatc tccataattc cgtctttctg cacggtgggg tcgcggctcg
      901 cattgctggt catcgtgccg ccgatcgcct ccatatcgac ccagggcgaa atgcaccagc
      961 cgcacgacgg ctgcgccaga ccggcgtcgc gaatcgccac cagggtcgaa acgaccaggc
     1021 cgcctcccgc actgtcaccc gccaacgcaa tgttcgcagg cgcaatccct tgtgcgagca
     1081 aatagcgata cgcggcaacc gcatcctcga ccggcgcagg aaatggatgc tccggtgcca
     1141 ggcgatagtg caatgccagc gtccgaccgc cgatatcgcg ggcgatttcc gaggtcacat
     1201 gccgatgact gtccagcgag ccgaacacgt agccgccgcc atggaagtac agcaccgcgc
     1261 gacgtgtgtc ggcacccggc gcactggtcc attccgccgg cacgccgttg gcggagacct
     1321 tttccaccac gatatcaccc gccgttggat acaccttcgc caatgcgtcc atgcctcggc
     1381 ggcgttcagc gatgtcggtc actttggggc gttgcgccag catttcacgc agtgcggcaa
     1441 cttgcggatc ggccatgatg catcctcctt gagtattcgg acgcgactat agcgctcagg
     1501 cgtgagacag gctactgtgc agtaagccag cctaccggga ggtcctcaag gggttcttac
     1561 cggccaaacg aacgaccaca atcaggcacg aggaaggcca tgaacgcacc agtcgacgtc
     1621 gatctgaagg cgcttgcgaa taccattccg cttgaggacc tcgatcccag cgacccgcga
     1681 atcttctacg aggacgcctg gcaaccgtat ttcgaacggc tccggcgcga ggccccggtg
     1741 caccgggtca aagacagccc atacggccct tactggtcgg tggcgaagta caaggacatc
     1801 attcaggtcg aggtgaacca caagatcttc tcctcatcgg atgaagtcgg cggcatcatg
     1861 atcaacgacg ctccgaaagg catggagcgg accagcttca tccgcatgga cccgccggaa
     1921 cacgatgagc aacggcgaga ggtcagttcc accgtcaacc ccgtgacgtt ggcgaagatg
     1981 gaggacctga tccggacccg caccaacatg gtgttggaca aactgccgcg gaacgagacc
     2041 ttcaactggg tcgagcacgt ctcgatcgag ctgacgtcga tgatgctggc aacgctgttc
     2101 gactatccga tcgatgacaa attgcgcctg atcaaatggt cggacatgtt catctgcgac
     2161 atcaacgcgc ccgacgcgcc ggtgaagtcg gaagcggaac gtttcgccaa gcagatggaa
     2221 ttcgccgaat acatgaacgt attctgggag gagcgcgcga agaagccgaa aagcttcgat
     2281 gtgctctcga tcctggcgca tggcgagacg acgaagaaca tgacgctgcg cgagaagatg
     2341 ggcgtgctga tcctgttcct ggtcggcggc aacgatacga cgcgcaactc gatgaccggc
     2401 gggctatggg gcctgtcgca attccccgat cagttccaga agctgcggga gaacccggag
     2461 ctggtcaccg gcatgatccc ggaaatcgtc cgctggcaaa cgccggtgat ccatatgcgc
     2521 cgcaccgcga ccgaggattt cgagttgcgc gggcaacaga tcaaggccgg cgacaaagtg
     2581 gtgatctggt acatctcggg caatcgcgat gaggagcaca tcgagaatcc gaaccagttc
     2641 attatcgatc gcgcccgccc acgcgaacac atgtcgtttg gcttcggcat ccatcgctgc
     2701 ctgggcaatc gcctcgccga aatgcagctt aagatcctgt gggaggaagt gctgcgccgc
     2761 gacctgaaga tcgaggtgct ggataagccg gtttacgctt actcgaactt cctgcatgcg
     2821 atccgcgatt tgccggttcg tatcgccgcc tgagctgacg cgtcatctcc cgatctgccg
     2881 ggagatgacg caggtccttc gacatggtac ccgcgcggtt gacctgacct gaggagtcga
     2941 tgtcagccac gcgcagcgtt ctggcccgca ccgtccgagg tgcagggtgg gtcattgcct
     3001 ggcgtctggg catgcggctg ctcggtctta tcagcacgct gatcctggtc cggttgctgg
     3061 caccagcgga tttcggattg ctcgcgctgg ccgcaagctt cgcccagacg gtcgacggta
     3121 tgatgatgct tggcaccgag gaggcggtca ttcgccagac cgctccggac cggcatgttt
     3181 acgatacggc gtggaccctg aacgtgctgc gtggcctgac cgtcacggca attgtcctgc
     3241 tcagcgcagg tcccgtcgcg cgtttctttg gtgatccgcg tttggtcacg gtgctgatcg
     3301 tgatcgctct gccgccgctg ctcgatggac tgtcaaacat tggcacggtc gacttccgtc
     3361 gtgagatgca gttccagaaa gaattcgcga tcatggtcgt gccgaaattc ttcggcatcg
     3421 tggcgacgct gaccgccgtt ttcatccacc ccagttacac cgccttgctt tacggtatcg
     3481 ccacgaacca atcgctgcgc agcgcgatga gctatgtgat gcatccgttc cggccacggt
     3541 tttcgttgcg tgcgtggcgc gggctaatcg ggtattcact atggacctgg ttgctaagtc
     3601 tcgcggttct gctgcggaac cgaagcgaca ctctgctctt gggccggctg gccaattcga
     3661 ctgcggtcgg cgtgtactct gtcggagccg aagtcgccgc actgccgacc agtgaactgg
     3721 tggagccgtt gtgtcgcgcg tcattcgccg gattcgctgc ggcgaaccgg gaaggcgttt
     3781 cagtcactga aacatttctg cgactgatga gttcggcagt cgtcgtgacg ttgccggtgg
     3841 gcgttgggtt ggctttggtc gccgctccgc tggtcaggct cgcgttcggc ccaggatggg
     3901 atggggcggt accggtgtta cgggtactgg gcctggcggg gatcatgacg gtgtttggtc
     3961 aaatcagttt gcatctgatg agtgctcata gtttgctcgg acgattgacg tttgtcgcac
     4021 tcgccggagc agtgctgcgg attgtcttac tcctgctgct gatcccccct ttcggcgtcg
     4081 ccggagccgc ctgggctgca gcaatcgcaa catgcgtgga ccagggggct acgctgatca
     4141 tggcactgcg ccatctgcgg gtgaggttac gtgcatttat cggtcaaatc gtgcggccaa
     4201 tgctggcggt atcgacgatg gcgattgcag tgctggcgac tggatcgtgg cacgcgctcg
     4261 atggagacgt cgtgtggacg ctggcggtcc aggccacagt cggtggaatt gtttacaccg
     4321 tcgtgttgct tgcaacctgg atagcagccg ggcgtcctga cgggccggaa gcagatagcg
     4381 ttcgggcgat acgccgcaag gtggcataag cgtcccgcc
//
LOCUS       DATAVD010000895         6962 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1761539, whole genome shotgun sequence.
ACCESSION   DATAVD010000895 DATAVD010000000
VERSION     DATAVD010000895.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6962
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1761539"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(105..1895)
                     /locus_tag="VHX39_17215"
     CDS             complement(105..1895)
                     /locus_tag="VHX39_17215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HEX3992913.1"
                     /translation="MAQNVSDFFWQRLHDWGVRCVFGYPGDGINGLLGGLQRLGEDKI
                     RFIQVRHEEMAAFMASAYAKFTGKLGVCLATSGPGASHLITGLYDARLDHMPVLAIAG
                     QQARTSVGGHYQQELDLVSMYKDVAGAFVQQASMPAQVRHLVDRAVRIATGERRVTAI
                     IMPNDLQEEDYEGPPRKHGTIHSGAGYARPKVVPYDAELQSAASILNEGKKVAILVGA
                     GALQATDEVIAVADRLGAGCAKALLGKAVLPDDLPWVTGSIGLLGTKPSYDLMMECDT
                     FLMIGSGFPYSEFLPKEGQARGVQIDIAPDMLSLRYPMEVNLVGDSAETLRALLPLLD
                     RKADDGWRKDIEKNVAAWWKLMDERAHQSANPVNPQRVTWELSPRLPERVIVTSDSGS
                     CANWYARDLKIRRGMSCSLSGGLASMGAAVPYAIAAKVAHPDRPVIALVGDGAMQMNN
                     MAELITVAKYWRDWQNPKWIVCVFNNQDLNQVTWEQRVMNGNPRFVASQQIPDVPYHR
                     FAELIGLRGILVDTPERMGAAWDEALASDRPVVLEVRTDPEVPPLPPHITLEQARKFT
                     SMLVKGDPDEGSLLVGTAKEVLASVLPGRD"
     gene            2139..2366
                     /locus_tag="VHX39_17220"
     CDS             2139..2366
                     /locus_tag="VHX39_17220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992914.1"
                     /translation="MREKLIRAAAGQRGFVVAPGSCDEMMSCLQRLVAALPVDARQFS
                     VSGDTDCVLGQSDGDAPSAVARDNASAATPT"
     gene            2495..3592
                     /locus_tag="VHX39_17225"
     CDS             2495..3592
                     /locus_tag="VHX39_17225"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEX3992915.1"
                     /translation="MPVAVYGYVAHGTETETTLRGNRAAFDAWRLVTRVLVGVEQRSQ
                     AIRLFGRHYAAPFGIAPMGGSALVAYQGHTVMAKAARAAGIPFILSANSIIPLEEVAE
                     AYPGAWFAAYQSPNAKAIEGMVARLARAGIAVMVVTADVPIGSNRESDARAGFGFPIR
                     PNLRLGLDVLGHPRWAAAVLARTLLKRGNPHIDDLEPYGGPGLFSRDVAGIAAHEGLN
                     WDHIRLIRRLWHGPLVVKGILSPDDVAVARNAGVDGVILSNHGGRQLDHAVAPLQILA
                     RALEQAGDMKVMIDSGFRRGTDIVKALALGAASVFVGRPFLFAAAYAGEAGVAHAIAL
                     LAKELDRDMAMLGVRRTGEITRALLVDAHQH"
     gene            3614..4360
                     /locus_tag="VHX39_17230"
     CDS             3614..4360
                     /locus_tag="VHX39_17230"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3992916.1"
                     /translation="MPRLLTAISLIGAGYGASRLLRAGDRRPRAARSWSAPKPPSPEA
                     DAAVMAADSVQALDPRFSRYMLGNTHVERLQTGARCMEGPAWCGDLGILVFSDIPNNR
                     LLKYDEQSGQVSILRQPSGYANGTTRDRQGRLITCTQDARSIVRTERDGRLTRRLRTA
                     ASFHGHGVTSLGCLICGAGHIAEGGVPSVKRLFTLRQTLRGWRRGGNRPLHGSGVGPD
                     GYVSPALHAHHASLRPALDIDQRSSKAPGL"
     gene            4660..4983
                     /locus_tag="VHX39_17235"
     CDS             4660..4983
                     /locus_tag="VHX39_17235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992917.1"
                     /translation="MTQARQELAEFVIHKAFDPVMRARPDDTSDADRQTLEHVKQATQ
                     AEIGRYRDYGSAQEVAINFPRDPNSAAAKKVHAQLRHLHLPTIEEFKEEFEEKARQLG
                     VRISS"
     gene            5030..5569
                     /locus_tag="VHX39_17240"
     CDS             5030..5569
                     /locus_tag="VHX39_17240"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX3992918.1"
                     /translation="MKAVVFHALGYIRLEDVPNPSIEQPTDAIVRLTASGFCGTDLHF
                     VRGTVSGTKKGRILEHEGVGVIEQLGPMARNFSIGDRVIIPSTIGCGTCCYCREGYYA
                     QCDNANPGGKTAGTAFFGGPEAAGGFDGLQAEKARVPRPAGSEPISPTLKKATQSPSS
                     AAVPSGSSPSPRRRSWVHV"
     gene            5554..5766
                     /locus_tag="VHX39_17245"
     CDS             5554..5766
                     /locus_tag="VHX39_17245"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX3992919.1"
                     /translation="MGARVIAVDRLEDRLYMVRRQGAETVNFENEDPVETVLALTGGI
                     GVGRVIDAVGVDAQHGHHGPHGPRVP"
     gene            5738..5959
                     /locus_tag="VHX39_17250"
     CDS             5738..5959
                     /locus_tag="VHX39_17250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992920.1"
                     /translation="MAPTGHASHEQAGESADEQKKIEPQAIKDGGQWVAGDAPTQALD
                     WAAESLCKAGQLAIIGVYPPAECFPSARR"
     gene            5956..6147
                     /locus_tag="VHX39_17255"
     CDS             5956..6147
                     /locus_tag="VHX39_17255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992921.1"
                     /translation="MNKNLTIKMGNCNHRRYFPTLIDLVRSGSVDPVTILTKVEPIQS
                     AIEAYRLSTGASPAGSRWS"
     gene            6369..6917
                     /locus_tag="VHX39_17260"
     CDS             6369..6917
                     /locus_tag="VHX39_17260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992922.1"
                     /translation="MLQYFVVPLWVTAGIADWWCHRATKIEETTGLKETLIHLLMLGE
                     AGLPVLAGLFLEFDAQVLSWMIAAFFQHEATAMWDVNYAVTEREVTPVEQHVHGVLEM
                     VPLMAVAFIGLHWPQLQELAGLRTEPPKPIRRKKEPLSATYAVGAAMAMLVLEVLPCV
                     EEAVRDWRAHPRRLHPAHAAII"
BASE COUNT         1274 a         2185 c         2232 g         1271 t
ORIGIN      
        1 tgagaggtgg ccgtaaacga agtgtttccg cggccttccg gtgcgtcggc cgggatcatc
       61 ccagccgacg cgatgaccgt ctgatccgtg ccgcagacgc aacgtcaatc tcgacccgga
      121 agtaccgacg ccagcacttc cttggccgtg ccgaccagca ggctgccctc gtccggatcg
      181 cccttcacga gcatcgatgt aaatttgcgc gcctgctcga gcgtgatgtg cggcggcaat
      241 ggcggtacct cgggatcggt ccggacctca agcacaaccg gccgatcgga cgcgagcgcc
      301 tcatcccacg ctgctcccat acgctccggt gtatcgacaa ggatgccacg caatccaatc
      361 agttccgcga accggtgata gggtacgtcg ggtatctgct gcgaggcgac gaagcgcgga
      421 ttaccgttca tcacgcgctg ttcccaagtc acttggttga gatcctggtt gttgaagacg
      481 cagacgatcc acttcggatt ctgccagtct cgccagtatt tggcgacggt gatgagttcc
      541 gccatgttgt tcatctgcat cgcgccgtca ccgacgaggg cgatcaccgg acggtcgggg
      601 tgtgcgacct tggccgcgat cgcgtaaggc acggccgcgc ccatggatgc caggccgccg
      661 gatagcgagc aggacatgcc gcggcgtatc ttgaggtcac gcgcatacca gttggcgcag
      721 gaaccggaat cgctggtgac gatcacgcgc tcgggcagac gcggcgacaa ctcccacgtc
      781 acgcgttgcg gattgactgg attagcggat tgatgggcac gctcatccat cagcttccac
      841 caggctgcaa cgttcttctc gatgtccttg cgccagccat cgtccgcttt gcggtcgagc
      901 agaggcagca gcgcgcgtag cgtttccgcg ctgtcgccga cgagattgac ctccatcgga
      961 tagcgcaggc tcagcatgtc gggggcgata tcgatctgga ctccgcgtgc ctgtccttcc
     1021 ttcggcagga actccgaata tggaaagccc gacccgatca tcaggaacgt gtcgcattcc
     1081 atcatcaggt cgtagctcgg tttcgttccg agcaaaccga tcgagccggt gacccaagga
     1141 aggtcatcgg gcaagaccgc cttcccgagc agcgctttcg cgcaacccgc accaagcctg
     1201 tctgcaaccg cgatgacttc gtcggtggcc tggagcgcac cggcgccaac aagtatggcg
     1261 acctttttgc cctcgttgag aatgctggcc gcggactgta gctcggcatc atagggtacg
     1321 actttaggac gcgcatagcc ggcgccggaa tggatcgtgc cgtgcttgcg cggaggccct
     1381 tcgtagtcct cttcctgaag gtcgttcggc atgatgatgg cggtgacgcg ccgctctccg
     1441 gtcgcgatgc gaacagcgcg atcgacgaga tgcctaacct gcgccggcat gctcgcctgc
     1501 tgcacgaaag ctccggcaac gtccttgtac atgctgacga gatcgagttc ttgctggtaa
     1561 tggccgccaa ccgaggtgcg agcctgttgg cccgcaatgg caagcaccgg catgtgatcg
     1621 agccgcgcat cgtagaggcc ggtgatcagg tgggaggcgc ccggaccgga ggtggcgagg
     1681 cacacgccaa gttttccggt aaatttcgcg taggccgacg ccatgaaggc ggccatttcc
     1741 tcgtgcctaa cctgaatgaa gcgtatcttg tcttcgccaa gccgctgcag tccgccgaga
     1801 aggccattga taccgtctcc cggatagccg aagacgcagc gaacgcccca atcatgcaga
     1861 cgctgccaga agaagtcgga aacattctgc gccatggtct tttctctcaa tgttacgggg
     1921 tgcgggattt gggagagccg ggtatcggcc cgtgcgctcc tgaaacgccg ccttgagcgc
     1981 ctcagttgcg ttccctaaag cgtgctgggc tcgaaaaggg cgtgccgctt gcgctccatt
     2041 tagacacggg gatcgggagc agccgccgca ccgatgcgat aggcggaacc tccaccgcgg
     2101 cccttcgttg aacggcaagg acgagaggaa gaccttgcat gcgagaaaag ctcatccgtg
     2161 ccgccgccgg ccagcgcggc ttcgttgtgg cgcccggcag ctgcgatgaa atgatgtcct
     2221 gcctgcagcg cctcgtggcg gcgttgccag tcgatgccag gcaattctca gtcagcggcg
     2281 acaccgactg tgtcctcggg caaagcgatg gcgatgcgcc ctcggccgtg gcgcgggaca
     2341 atgcttcggc ggccacgccc acatgagtgc ggcgaccctg gcaggcaccc atccgctctc
     2401 ccctaccgga tagcgtccga cgcgggagca tccctcgcat cgcctgcgac gcatcctgga
     2461 cctcgacgat ttcgagcgcg cagcgcggcc gcatttgccg gttgccgtct acggttatgt
     2521 cgcccacggc acggaaaccg agacgaccct gcgcggcaac cgcgccgctt tcgatgcctg
     2581 gcgcctcgtg acgcgggtcc tggtcggcgt cgagcagcgc agccaggcaa tccgattgtt
     2641 cggccggcat tacgccgcgc ccttcggcat cgcgccgatg ggcggcagtg cgctggttgc
     2701 ctaccagggc cacacggtca tggcgaaggc cgcgcgtgcg gccggcatcc ccttcatcct
     2761 cagcgccaat tcgatcattc cgctggagga ggtggcggaa gcatatccgg gcgcgtggtt
     2821 cgcggcctat cagtcaccga acgccaaggc gatcgaaggc atggtcgcac gcctggcccg
     2881 tgccggtatc gccgtcatgg tcgtcaccgc ggatgtgccg atcgggtcca accgcgagag
     2941 cgacgcgcgt gcaggcttcg gttttcccat acggccgaac ctgcgcctgg gtctggacgt
     3001 cctggggcac cccagatggg ccgccgccgt gctggcccgc accctgttga agcgtggcaa
     3061 tccccatatc gacgacctgg aaccgtatgg cggtccggga ctattttcgc gcgacgtggc
     3121 gggtatcgcc gcgcatgaag ggctgaactg ggatcacatc cggctgatcc gccggctatg
     3181 gcacgggccc ctggtcgtga agggcatcct gtcgccggac gacgtggcgg tcgcccgcaa
     3241 cgccggggtc gacggcgtca tcctgtccaa tcatggcggc cgtcagttgg atcatgccgt
     3301 ggcgccgctg cagatcctgg cgcgagcgct ggagcaggca ggggacatga aggtcatgat
     3361 cgacagcggg ttccggcgcg gcaccgacat cgtcaaagcc ctggccctgg gtgcggcttc
     3421 cgtcttcgtc gggcggccct tcctgttcgc cgcggcctat gccggcgagg caggcgttgc
     3481 ccacgccatc gcgctgctcg ccaaggaact ggacagggac atggcgatgc tgggcgtccg
     3541 ccggaccggg gagatcaccc gcgccctgct cgtcgacgcc catcaacact gatacttgcc
     3601 agagggaatt ccgatgcctc gcctgctcac cgccatttcg ctcatcggcg ccggctacgg
     3661 cgcatcgcgt ctgctgcgcg ccggcgaccg gcggccccgc gccgcccggt cctggagcgc
     3721 gcccaagccg ccttcgcccg aagccgacgc ggccgtcatg gccgccgaca gcgtgcaggc
     3781 gctggacccg cgtttcagcc ggtacatgct cggcaacacc catgtcgaac gactgcagac
     3841 gggcgcgcgc tgtatggagg gaccggcctg gtgcggcgat ctcggcatcc tggtgttcag
     3901 cgacatcccg aacaaccggc tgctcaaata cgacgagcag agcgggcaag tcagcatcct
     3961 gcgccagcct tccggctatg ccaacggcac cacccgcgac cggcaggggc ggctgatcac
     4021 ctgcacccag gacgcccgca gcatcgtccg aaccgaacgc gatggcaggc tgacgaggcg
     4081 gctgcggacg gctgcttcgt tccacgggca tggggtcact tccttgggat gtcttatttg
     4141 cggcgcgggg cacattgcgg agggcggcgt accgtcagtg aaacgcctgt tcacactccg
     4201 ccaaacgctt cgaggctggc ggcgtggcgg taatcggcct ttacatggca gtggggttgg
     4261 tcctgacgga tacgtctcgc cggcattaca cgctcatcat gcgtcgctac gccctgccct
     4321 ggatattgat caacgatcaa gtaaagcgcc cggtctttag cgttccgcgg gtaccccatc
     4381 agtgcggcac gaaagttcag gccgatgtca gagtttcacg atagacggag gccttgagat
     4441 gaatggggga caaggcgcct gatctaattg cctcaaaccc gctcgctcgc ttgccgttcc
     4501 ccgggctcct cgcctttcat taaggccacg gcgagtacca ccggcttgct gtcgatgcgg
     4561 aaggcgcttt gggcaggcgc ggattcaatg attcacgacg ggtgaacctt ccgctctgtc
     4621 cgtggttaac acgcgagcaa tgtcccaaga gaggcgacca tgactcaggc gcggcaggaa
     4681 cttgccgagt ttgtcattca caaggctttc gatcccgtca tgcgggcgcg gccggatgac
     4741 acgtccgacg ccgatcggca gactctcgaa catgtgaagc aagcgacaca ggccgagatc
     4801 ggacgttacc gtgactatgg ttcggcacag gaggtagcca tcaactttcc gcgcgaccct
     4861 aattccgcgg ccgctaaaaa ggtgcatgcg caactgcggc atttgcatct gccgacaatc
     4921 gaggaattca aagaagagtt tgaagaaaag gcacggcaac tcggcgtcag gatttcgtct
     4981 tgacccggga tgcgcggaac ccgcgaatgc tgaacaatga aggtgaagct tgaaagctgt
     5041 tgtcttccac gcccttggct atatccggct cgaggatgtt cccaatccct cgatagagca
     5101 accgacggac gccatcgtgc ggcttaccgc ttcgggattt tgcgggacgg atcttcactt
     5161 cgtgcgcggt actgtcagcg ggacgaagaa gggacggatt cttgagcacg agggcgtcgg
     5221 cgtgatcgag cagctcggtc ccatggcacg caacttctcg atcggcgacc gggtgatcat
     5281 tccgtccacc atcggctgcg gcacttgctg ctactgtcgg gaaggctatt acgcgcaatg
     5341 cgacaacgcc aatcccggcg gcaagaccgc gggtaccgct ttcttcggcg gtccggaggc
     5401 ggccggcggt ttcgatggcc tgcaagccga aaaggctcgc gtgccccgac cggctggttc
     5461 ggagccgatc tcgccgacat tgaagaaggc cactcagtcg ccgtcttcgg ctgcggtccc
     5521 gtcgggcagt tcgccatcgc ctcggcgaag atcatgggtg cacgtgtgat cgccgtcgac
     5581 cggctggagg atcggctcta catggtccgc aggcagggtg cagaaacggt gaatttcgag
     5641 aacgaagacc cggtggaaac cgtcctggcg ctcaccggcg ggattggggt cggccgcgtt
     5701 atcgatgctg tgggcgtgga tgcgcagcac ggccatcatg gcccccacgg gccacgcgtc
     5761 ccatgagcag gcgggggaat ccgccgacga gcagaagaag atcgagccac aggccatcaa
     5821 ggacggcgga caatgggtgg ccggcgatgc gccgacacag gcgctcgact gggccgcgga
     5881 atctctgtgc aaggcgggac agcttgccat catcggcgtg tatccgccgg cggagtgttt
     5941 cccatcggca aggcgatgaa caagaacctc accatcaaga tggggaactg caaccatcgc
     6001 cgatatttcc cgacactgat cgatctcgtg cggtccggca gcgtcgatcc ggtgacgatc
     6061 ctcaccaagg tggagccgat acagagcgcg atcgaggcct acaggctttc gaccggcgcg
     6121 agtccggctg gatcaaggtg gagctgaagc cgaaggcagc cttaggccgc ccgcctagcc
     6181 aagccagggt gtccaacgtg caagaccggg cttacagata tggagacaac aatggcccga
     6241 gcggcggttc gactgcatct cctcgtgacg gtatcggccg cggccctgtc catgggtgca
     6301 gggcttcttg cccgacggcg atcacgaaaa atgacctcgc aagagcggat cggcatctgg
     6361 cacgcgaaat gctgcaatat ttcgtcgtcc cgctatgggt cacagcgggc atcgcggact
     6421 ggtggtgcca ccgtgcaacg aaaatcgagg aaacgaccgg gctcaaggag acactcatcc
     6481 atctcctcat gcttggcgaa gcagggttgc ctgttctagc cggactgttt cttgaatttg
     6541 atgcacaggt tctgtcgtgg atgatcgctg ccttcttcca gcatgaagcg acggcgatgt
     6601 gggacgtgaa ctatgccgtc acagagcggg aggtgacgcc ggtcgaacaa catgttcatg
     6661 gtgttctgga aatggtgcct ctgatggccg tggccttcat tggcctgcac tggccgcaac
     6721 tgcaggaact ggcggggctg cgcaccgaac cgccgaagcc gatccgccgc aagaaggaac
     6781 cgctgagcgc gacctatgcg gtgggtgctg ccatggccat gctggtgctc gaggtgcttc
     6841 cgtgcgtcga agaagcggtg cgcgactggc gggctcaccc gcggcgtctg catcccgctc
     6901 acgcggcgat tatctgaaga ggaggcaact atgacgtttg tattgcaaag ccctgccttt
     6961 tc
//
LOCUS       DATAVD010000896         3690 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3436320, whole genome shotgun sequence.
ACCESSION   DATAVD010000896 DATAVD010000000
VERSION     DATAVD010000896.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3690
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3436320"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..841)
                     /locus_tag="VHX39_17265"
     CDS             complement(<1..841)
                     /locus_tag="VHX39_17265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEX3992923.1"
                     /translation="MVRCAIYTRKSSDDGLEQDFNSLHAQREACEAYIKSQKLEGWVV
                     SPEEYDDGGISGATMERPALQRLLADIRARKIDTIVVYKVDRLTRSLADFAKLVEIFD
                     AHTVSFVSVTQSFNTTTSMGRLTLNVLLSFAQFEREVAGERIRDKIAASKKRGMWMGG
                     NPPLGYDVRDRKLVVNEPEAETVRHTFRRYVALGSVPLLVRDLAASGIESKQWTTGTG
                     RIIRGRRVVRGALYLMLKNRLYMGDVVHKDAHYPGQQEAIVDQALWNQTQALLAFNAG
                     QKQA"
     gene            complement(870..1376)
                     /locus_tag="VHX39_17270"
     CDS             complement(870..1376)
                     /locus_tag="VHX39_17270"
                     /inference="COORDINATES: protein motif:HMM:NF022598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2924 domain-containing protein"
                     /protein_id="HEX3992924.1"
                     /translation="MTPIDKELARLAGLSGRDLRAEWRRRFRREPPPDLSRDLLLRAI
                     TYKAQEAAHRGLSQTARKALSDLGGRIIEEGIRANLSVAPVIAPGVRLVRDWGGRAHS
                     VLVLEKGFEYAGERVRSLTEIARRITGAHLSGPRFFGLTPGQAKARSSGSSDACRVGV
                     DGPDLASS"
     gene            complement(1378..1746)
                     /locus_tag="VHX39_17275"
     CDS             complement(1378..1746)
                     /locus_tag="VHX39_17275"
                     /inference="COORDINATES: protein motif:HMM:NF023420.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3489 domain-containing protein"
                     /protein_id="HEX3992925.1"
                     /translation="MTTVPTTRKGRTPRGGGATMNAHAANPEAVVEAARRRRSRDGTV
                     TNAATSIEASPRPTSKKAAIESLVRREDGATIPQLIHATGWQEHSIRAALTGLRKAGL
                     AVARERDQQGRTFYRMVGAS"
     gene            2185..2994
                     /locus_tag="VHX39_17280"
     CDS             2185..2994
                     /locus_tag="VHX39_17280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992926.1"
                     /translation="MAEAVGLSSSPNLKSRQRELSAVSVSCLTDGFRCPATIRSSEKS
                     SHTRDRSHATLSRRRCSWDGEHRRLNSMPGTRHRPQRRGCALERIGPCTAPSNWRETR
                     LLQLSAGVAVDLGAKRDFEDLRGFPAHTPLLQTEFRILSRIYPRHSNVNSGSDHLRPT
                     QTLPKTSKVCACDDRIAKIGTWNVAMAERSATVFEIAHLSSLCIATEAVAKVGFTNHN
                     NVICPMLRSPLRLVIRAYQGKPDRERHLPFTRAKTSVSSSAWDRRPAVDRG"
     gene            3187..>3690
                     /locus_tag="VHX39_17285"
     CDS             3187..>3690
                     /locus_tag="VHX39_17285"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX3992927.1"
                     /translation="MPAKNYAATRFSALDEISSTNVKNLQVAFAFSTGTDHGLEAAPI
                     VANNTMYIVTPYPNIFFALDLTKPGAPIKWSYRPHPAAASQGVACCDVVNRGAVYSNG
                     KVFFNTLDDTTIALDSATGKRLWQTKLGDINTGETITMAPLVVKGKVLVGDSGGELGV
                     RGWLTALD"
BASE COUNT          700 a         1171 c         1096 g          723 t
ORIGIN      
        1 cggcctgctt ctggcccgca ttgaaggcca ggagcgcctg ggtctggttc caaagcgcct
       61 gatccacgat ggcctcttgc tgcccgggat aatgggcatc cttgtgaacg acgtcgccca
      121 tgtagagccg gttcttgagc atcaggtaaa gcgcgcctcg gaccacccga cggccgcgga
      181 tgatgcgacc ggtgcctgtt gtccactgct tgctttcgat gccgctcgca gcgaggtccc
      241 gaaccagcaa cgggaccgaa ccgagtgcga cgtagcggcg gaaggtgtgg cggaccgttt
      301 ctgcctcagg ctcgttcacg acgagtttgc ggtcccggac gtcatatccc agcggtgggt
      361 tgcctcccat ccacatccca cgttttttcg aagccgcaat cttgtcgcgg attcgctccc
      421 ccgcaacctc acgctcgaac tgcgcgaatg acagcagcac attcagtgtc agccggccca
      481 tgctggtcgt tgtattgaat gattgggtaa ccgacacgaa tgagaccgtg tgcgcgtcga
      541 agatctccac cagtttggcg aagtccgcga gcgaccgggt gagccggtca accttataga
      601 ccacgatggt atctatcttc cgggcccgga tgtcggccag gaggcgctgc agcgccggtc
      661 gctccatggt ggcgcctgaa atgcctccat cgtcatactc ctcaggcgaa acgacccagc
      721 cttcaagctt ctgacttttg atgtaggcct cgcaggcctc gcgctgggcg tgcagcgagt
      781 tgaagtcctg ctcgaggccg tcgtcggacg atttgcgggt gtaaatggca cagcggacca
      841 cggccccgcc acgccgcgtc gggccggtgt caggagctgg caagatcagg tccgtcgaca
      901 ccgacgcgac aggcgtccga tgagcccgac gacctggcct tcgcctgacc gggcgtcagc
      961 ccgaagaacc gtgggcccga caagtgcgca ccggtgatgc ggcgtgcaat ttcggtgaga
     1021 gaacgaaccc tttcgcccgc gtattcaaaa cccttttcaa gcacgagcac ggaatgcgcc
     1081 cgaccgcccc agtcgcgcac cagacggacg ccgggcgcga taaccggggc gacgctgaga
     1141 ttggcccgga taccttcttc gatgatcctg cctccgagat cgctcaatgc cttcctggcg
     1201 gtctggctca ggccgcggtg ggcggcttcc tgggctttgt aggtgatcgc ccgcaacaga
     1261 agatcgcggc tcaggtccgg cggtggttca cgccgaaacc gtcggcgcca ttccgcccgt
     1321 aggtcgcgcc cggacaggcc cgccaggcgg gcaagttcct tgtcgatggg tgtcatctca
     1381 cgacgctccc accatacgat aaaatgtcct gccttgttga tcgcgttccc gcgcgaccgc
     1441 taaacccgcc ttgcgcaggc ctgtcaaagc ggcacgaatg ctgtgttcct gccagcccgt
     1501 ggcgtgtatc aactgcggga tcgtggcacc gtcctcgcgt cgcaccagag actcgatcgc
     1561 cgcctttttg ctggtggggc gtggcgaggc ctcgattgat gttgccgcgt tggtgacggt
     1621 cccgtcgcgc gaacgccgcc ggcgcgccgc ttccaccact gcttctgggt tcgccgcgtg
     1681 agcattcatc gtcgctccac cgccgcgcgg cgtccggccc ttcctcgttg ttggcaccgt
     1741 cgtcatcgtt gatacctccg ttcacaggcc acatggcgct gtcaccgcca tgagccccga
     1801 aggccgcgag ggctggggcg gaggtcccgc gatgccgtga ctcgcggcgg ctccggggtg
     1861 gccatggacg ctctgtcccg cacgaaagtc cagtcgtttc tgggcttatc ggcgagttcc
     1921 tcaggcacgg caccgcatgc caccacgggc ggcgaaacca gaaagggggg ccagaaagtc
     1981 tccacatttg ctgcgagaac agggaagctc ggcgcggcga aagctctcca tctcgaagtt
     2041 cgaatccttt cgcgccaggc ccggagcaaa caggcggccc agccgttggc accagtttac
     2101 gatcggttca ccgaggactt cgggaaggcc gatttcagag cggcaaatgc gtcgatcgag
     2161 ggaacgtcct aactcgagaa atccatggcc gaggcggtcg gtttatcatc gagcccaaat
     2221 ctaaaatccc ggcagcgaga gttgtcagcc gtttccgtgt cctgtttgac cgacggcttc
     2281 cgctgccccg ccaccatccg ctccagcgaa aagtccagcc atacgcgcga tcgctcccac
     2341 gcaacgctct ctcggcggcg ttgttcgtgg gatggcgaac atcggcgctt gaattccatg
     2401 ccgggaaccc gccaccggcc gcagcgacga ggatgcgcgc ttgaacggat cggcccctgc
     2461 accgcgccgt caaactggcg tgaaacgcga ttacttcaac tcagcgcagg cgtagcagtt
     2521 gatctcggcg ccaagcgcga tttcgaggat cttcggggtt ttccagctca tacgccgctc
     2581 ctccaaactg agtttcggat cctctccaga atctacccga gacactccaa cgtcaattct
     2641 ggctcagatc atctcagacc aactcaaacg cttccaaaga cttcaaaggt ctgcgcatgc
     2701 gacgatcgga tcgctaaaat cggcacatgg aatgtcgcca tggcagagag gagtgccact
     2761 gtgtttgaga tagctcatct gtccagtctc tgtattgcaa cggaagccgt ggcaaaagtt
     2821 gggttcacca atcataataa tgtgatctgt ccgatgctcc gaagcccgtt gaggctggtg
     2881 attcgcgcct atcaaggtaa gccggatcgc gagcgccacc tcccttttac ccgtgcaaaa
     2941 acctcggtca gttcctccgc gtgggacaga agaccggccg tagatagagg ttgatgagtc
     3001 atgacattcc ggataacgca attttccggt cgatcccgga cgcatgattc cgctgaatct
     3061 atctggcatt ccagatggct ccggctcctg ctgaccggcg cgtcgcttgc gctcaatcca
     3121 gcgctggctg cagctcagac cgccttggcg ccaaccgagg aggcacccga tgacggtgag
     3181 tggacaatgc cggcaaagaa ttatgcggcc acccgatttt ctgcactcga tgaaatcagc
     3241 agcacgaacg tgaagaatct gcaggtcgcc tttgccttct cgaccggaac agatcacggt
     3301 ctggaggcgg caccgatcgt ggcgaacaat acaatgtaca ttgtgacgcc atatccgaac
     3361 attttcttcg cgctcgatct caccaaacct ggcgcgccga tcaaatggtc ttatcggccg
     3421 catccagccg cggcgtccca gggcgtggca tgctgtgacg tcgtcaaccg cggtgccgtg
     3481 tactcgaatg gcaaggtctt cttcaacacc ctcgacgaca ccacgatcgc gctggactca
     3541 gcaaccggca agcggctctg gcagaccaaa ctgggcgata tcaacaccgg cgaaacgatc
     3601 accatggcgc cgttggttgt aaagggaaag gttttggtcg gtgactccgg cggtgagctt
     3661 ggcgtgcgcg gctggttgac cgcgctggat
//
LOCUS       DATAVD010000897         1696 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_273806, whole genome shotgun sequence.
ACCESSION   DATAVD010000897 DATAVD010000000
VERSION     DATAVD010000897.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1696
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_273806"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..730
                     /locus_tag="VHX39_17290"
     CDS             <1..730
                     /locus_tag="VHX39_17290"
                     /inference="COORDINATES: protein motif:HMM:NF024795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Hint domain-containing protein"
                     /protein_id="HEX3992928.1"
                     /translation="FSIDGVLIPVEFLVNHRTILWDDHAQEVTFYHVELETHDVLLAN
                     GASAESYRDDGNRWLFQNANSGWGLPPQDPCAPVLTGGPLVDEIWQRLLRRAGPRPNL
                     PLTDDPDLHLLVDGTRVDAASRSEMLHLFRLAACPATVRIVSRTGAPQDFGLARDPRS
                     LGVALRQIMITQGIRIRTIEADDKALTNGFHEFEPDNNIRWTDGDAAAPATLFNGFAG
                     PLELTLRLDGRASYYNDGRAQRMA"
     gene            complement(677..1156)
                     /locus_tag="VHX39_17295"
     CDS             complement(677..1156)
                     /locus_tag="VHX39_17295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992929.1"
                     /translation="MTGASALCGRCPAAKAKRCNRAAWGDTPCHGDVFHIIHKCEGLA
                     NPLSRIAKGARSRRENLEAKPDRADQPDANEAFVTKLAPARQAETRARELGRGIRTLV
                     QWLSHDVLGLAGPDRATRRELFDFITDELERLEPEDARQPSCHALRAPVVVIARPAI"
     gene            complement(1153..>1696)
                     /locus_tag="VHX39_17300"
     CDS             complement(1153..>1696)
                     /locus_tag="VHX39_17300"
                     /inference="COORDINATES: protein motif:HMM:NF033587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HEX3992930.1"
                     /translation="YAVELEKRIRPHLRMSNGSWRVNDTYVKVKGRWMYLYRAVDSRG
                     QSIDFLLSAKRDAETARRFFRKALAQPHTVNPRTITVDKNAAYPKATTEMKKDGELWR
                     RSRLRQVKYLNNIVEQDHRNVKRLTSPGLGFGSFWTARRTLAGYEAMAMIRKGQVRNI
                     GSRDIKDQARFIASLFDVAV"
BASE COUNT          301 a          529 c          517 g          349 t
ORIGIN      
        1 gttttccatt gacggcgtgc tgatcccggt agagttcctg gtgaaccacc gcacgatcct
       61 gtgggacgac catgctcagg aagtgacgtt ctatcatgtc gaacttgaga cacacgacgt
      121 gctgctggcg aacggcgcat cggccgagag ctaccgcgac gacggcaatc gctggttgtt
      181 ccagaacgcc aacagcgggt ggggcttgcc accccaggac ccgtgcgcac cggtcctcac
      241 cggtggcccg ttggttgatg agatttggca acgccttctg aggcgcgccg gcccacggcc
      301 gaacctaccg ctgacagatg acccggacct gcatcttctt gttgatggca ctcgggtgga
      361 tgccgcatcg cgaagtgaaa tgctgcatct gtttcgtctg gccgcttgcc ccgcaaccgt
      421 gcgtatcgtt tcgcgcaccg gcgctccgca ggattttgga ttggcgcgcg acccgagatc
      481 cctcggcgtg gcgctgcggc agattatgat aacgcagggt attcggatcc gaacgattga
      541 ggccgacgac aaggcgctga caaacggctt ccatgagttc gaaccggaca acaacatccg
      601 ctggaccgac ggcgatgccg ccgcaccggc gacgttgttc aacggcttcg ctggtcccct
      661 ggaattaacg ctgaggttag atggcagggc gagctattac aacgacgggc gcgcgcagcg
      721 catggcatga gggctggcgc gcatcctccg gctcgagacg ctccagttca tcggtgatga
      781 agtcgaacaa ctcccgccgc gtggcccgat ccggaccggc cagccccaga acgtcgtggc
      841 tcagccattg gacgagggtg cggataccgc ggcccagttc acgcgcccgg gtctcggctt
      901 gccgtgccgg cgccagtttg gtgacgaacg cctcgttcgc atcaggctga tccgcacggt
      961 cgggcttggc ctccaggttt tcacgccgcg atctggcgcc cttggcgatg cgcgacagcg
     1021 gattggcgag gccttcgcat ttgtggatga tgtgaaagac atcaccatgg cacggcgtgt
     1081 cgccccaggc ggctctgttg caacgttttg ctttggctgc ggggcatctg ccgcagagcg
     1141 ccgaggcacc cgtcaaacgg caacatcgaa cagcgaggcg atgaaccgcg cctggtcctt
     1201 gatgtcgcga ctaccgatat tccgaacctg ccccttcctg atcattgcca tcgcttcgta
     1261 gcctgccagc gttcgtcgag ccgtccagaa gctgccaaaa ccaagtcctg gcgaggtcag
     1321 tcgtttgacg ttccgatgat cctgctcaac aatattgttc aggtatttga cctgtcgcag
     1381 ccgtgatcgg cgccagagtt cgccgtcctt cttcatctcc gtggttgcct taggataggc
     1441 tgcattcttg tccaccgtga tggtgcgcgg gttcactgtg tgcggctgcg ccaatgcctt
     1501 gcggaagaag cgcctcgctg tctcagcgtc gcgcttggcc gacagcagaa agtcgatgct
     1561 ctggccgcgg ctgtcgacag cgcgatacaa atacatccac cggcctttaa ccttcacgta
     1621 ggtatcattc acccgccagg agccgttgct catgcgcagg tgcggccgga tccgcttttc
     1681 aagttcgacc gcgtaa
//
LOCUS       DATAVD010000898         2728 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2133879, whole genome shotgun sequence.
ACCESSION   DATAVD010000898 DATAVD010000000
VERSION     DATAVD010000898.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2728
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2133879"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            147..1394
                     /locus_tag="VHX39_17305"
     CDS             147..1394
                     /locus_tag="VHX39_17305"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX3992931.1"
                     /translation="MALNNLRAIVILIVVAFHSVLAYLAWLGSTPFPFDRSPFQWRAF
                     PIIDSHRWFGFDLICAWQDVYLMAMMFFLSALFAWPSLRRKGTSKFLTDRLLRLGVPF
                     IFAIIIVMPIALYPVYAVTAVDPSLTAYAEHYLALPFWPNGPMWFLWQLLALSFLAAM
                     LSRVAPGWVEHLATTSGASPRRFVIWLLGASILAYVPLALIFTPWLWAEHGPLGLQFS
                     RPLLYCVLYCAGLGIGAHGLDRGLLASDGPLVRHWAVWFASALAAFLLWMGLTALAMG
                     YVPTAPFAMQLVVDISFATACVCGCLFVLAFCLRFGAIQSPILNNLAENAFGIYLFHY
                     PFVVWLQYALLPFAWPAIMKGTIVFAGATALAWAMAVATRLIPFGALLVGAERRLLAT
                     SPALQGQYSRAQPPLPHPRIVGR"
     gene            1422..2552
                     /locus_tag="VHX39_17310"
     CDS             1422..2552
                     /locus_tag="VHX39_17310"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3992932.1"
                     /translation="MPLIFRLASRNLLQDRLRFVATVVGVVFSIVLVTVQMGLFLSFE
                     RMVTTMIDHAPADLWVVPLGTKCFEDPTLLDEHDRTRALSVAGVTAAVPLLIGFTQWA
                     VPTGGTTPVLVIGSNGDTQGLQPWNVIKGNTGDLAEPHAVAIDRTYFDRLGMAQVGDT
                     TEIRDQPVHAVAITSGIRSFTTTPYVFTSLSQARSYIGTPPNRVSYFLIHVGKGTDIA
                     SVRKALLANIPKIEVLTPDEFRSRSRSFWLFGTGAGAALFAGALLGIIVGMVVVAQTL
                     YSSTKDHLSEFATLRAIGSSGWYIHKVIICQALLSAVIGFAVAASVSLAIVRLTVDTA
                     LPIMMTPLLTSGLLLLTVLMCVVSAIAAIVQVLRVDPVVVFR"
     gene            2552..>2728
                     /locus_tag="VHX39_17315"
     CDS             2552..>2728
                     /locus_tag="VHX39_17315"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3992933.1"
                     /translation="MSAPVIEARNLVKFLGRGAGRVEALRDVSLSLAGGQLTLLMGPS
                     GSGKTTLLSVLGCIL"
BASE COUNT          430 a          822 c          785 g          691 t
ORIGIN      
        1 gtaccaaacg gatcggcaat gttggacgca ctcgcgaacg gtcggtcgaa ctatgcacgg
       61 cgggagcatt ggacagcgtc ttcacgggtc catcatacca ccaggcggaa taagaccgcc
      121 gccatatgac cagttccaga tccagtatgg ccctcaacaa tttacgggcc atcgtgatcc
      181 tgattgtcgt ggctttccat tccgttctcg cttatttggc gtggctgggt tcgaccccat
      241 tcccattcga tcgctctccc ttccaatggc gcgcctttcc catcatcgac agccatcgtt
      301 ggttcggatt tgacctgatc tgtgcgtggc aagacgtcta tctgatggcg atgatgtttt
      361 ttctctcggc gctgttcgcc tggccgagcc tgaggcgcaa aggcaccagc aagttcttaa
      421 ccgaccgcct gcttcgactg ggcgtgcctt tcatttttgc aataattatc gtcatgccga
      481 tcgcgcttta tccggtctac gccgtgacgg cggttgaccc gagcctgacc gcgtacgccg
      541 agcattacct ggcgctccca ttttggccca atgggccgat gtggttcctg tggcaacttt
      601 tggccttatc gtttctcgcc gcgatgctaa gtcgtgtcgc gcctggctgg gttgagcacc
      661 ttgcaacgac ctccggtgca tcgccccgtc gttttgttat ttggcttctg ggcgcatcga
      721 tcctcgccta cgttcctttg gcgttgatct tcacgccctg gctctgggct gaacacggcc
      781 cactcgggct gcagttcagc cgtccgctgc tgtattgcgt gctttattgc gccggtcttg
      841 ggatcggcgc gcatggtctc gatcgaggcc tgcttgcatc cgacgggcca ttggttcggc
      901 actgggccgt ttggtttgcg agtgcgctgg cagccttcct gctttggatg ggcctcacgg
      961 ccctggcgat gggctacgtc cccaccgctc cattcgctat gcaactcgtc gtcgacatca
     1021 gcttcgcgac agcgtgtgtc tgcggctgcc ttttcgtact ggcgttttgc ctgcgtttcg
     1081 gcgcgataca gtcgccgata ttgaacaatt tggctgagaa cgcctttggc atctatttgt
     1141 ttcactatcc tttcgttgtc tggcttcagt acgcgctgct gccatttgca tggcctgcca
     1201 tcatgaaagg cacgatcgtc ttcgccggag caaccgctct cgcctgggcg atggccgtcg
     1261 caacgcgcct gattccgttt ggcgcgctgc tggtgggggc agaacgtcgg ttattggcaa
     1321 cctccccggc tctgcaaggc cagtacagca gggcgcaacc gcccctcccg caccctcgaa
     1381 ttgtcggtcg atagcatgac cgtcgacagc ccggtcctgc catgccgctg atttttcggc
     1441 ttgcatcgcg aaatctgttg caggaccggc ttcgctttgt cgcgaccgtc gttggggtgg
     1501 ttttctccat tgttctggtc acagtccaga tgggcctgtt tttaagtttc gagcgcatgg
     1561 tgacaacaat gatcgatcat gcgcctgccg acctctgggt cgttccactt ggaacgaaat
     1621 gctttgagga tccgactttg ttggatgagc acgaccggac tcgcgcatta tccgttgccg
     1681 gtgtgaccgc ggccgtcccg ctcctgatcg ggttcacgca gtgggcggtc ccaaccggcg
     1741 gcacaactcc ggtgctcgtt atcggatcga acggcgatac tcagggtctg cagccctgga
     1801 atgtgatcaa aggcaatacc ggtgacctgg ccgagcctca tgccgtcgcg atcgaccgga
     1861 cgtattttga tcggcttgga atggcgcagg ttggcgacac gaccgagatc cgcgatcagc
     1921 cggtgcacgc ggtagccatc accagcggca tccgctcatt cacgacaacg ccctatgtgt
     1981 tcacctcgct gtctcaggcg agatcttaca tcggaacgcc gccaaatcgg gtttcgtatt
     2041 ttctaattca tgtcggtaaa ggaacggata tcgcgagtgt tcgcaaggcg ctgctggcga
     2101 atattccgaa gatcgaggtt ctgacccccg acgaattccg tagccgcagc cgctcgttct
     2161 ggctgttcgg taccggcgcc ggagctgccc tttttgccgg cgcgctgctc ggcatcatcg
     2221 tcggcatggt cgttgttgcc caaacgcttt attccagcac gaaggatcat ttgagtgaat
     2281 ttgcgacact gcgtgcgatc gggtcgtccg gttggtatat tcacaaagtc atcatttgtc
     2341 aggcgttgct cagcgccgtg atcggcttcg ctgttgccgc ttccgtcagc ctggccattg
     2401 tcagactcac cgtcgacacc gcgttgccga tcatgatgac gcccttgctg acatcgggct
     2461 tgctcctgct caccgttctg atgtgtgtcg tctcggccat cgccgccatc gtgcaggtgc
     2521 tgcgtgtcga cccggtggtg gtgttccggt gatgagcgct cccgtgatcg aagcccgcaa
     2581 cctggtaaaa tttcttggcc gtggcgccgg ccgggtcgag gcgctccgag acgtgagcct
     2641 gtcgcttgcg ggagggcaat tgacgctgct catgggacct tccggcagcg gaaagaccac
     2701 gttgctctcg gtgcttggat gcatactc
//
LOCUS       DATAVD010000899         1796 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2318865, whole genome shotgun sequence.
ACCESSION   DATAVD010000899 DATAVD010000000
VERSION     DATAVD010000899.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2318865"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1391)
                     /locus_tag="VHX39_17320"
     CDS             complement(<1..1391)
                     /locus_tag="VHX39_17320"
                     /inference="COORDINATES: protein motif:HMM:TIGR03506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein"
                     /protein_id="HEX3992934.1"
                     /translation="MGIFDALTTAVAGLQSQSFALQNISGNIANSQTVGYKETDTSFE
                     DLVSQTALNQQTAGGVFANSTSTNTVGGTLQSSSISTNMAIEGDGWFVVTQPTGVSGN
                     APNFTGEQDYTRRGDFQLDDAGYLVNGAGYYLMGIPVDPGTGKATSISPQVLQFNHDF
                     IPAQQTTSITYQANLPATPSAGVLDPSYFEANPINGLAVPAGMTGTGALLDPDALAIG
                     TGTVGGLNTSTTLASLGIAAGQTITVNDGTNTTAYTSTGSDTVGDLVNAINAGTAAVT
                     ASLNPSGNLVLTGNNYTATIAITGSGSTGSALGFATGANTFSPVNLLTQDAVTQGQTL
                     TVQVGGGATQTITFGTGSGQVATLGELQTQIQALTGVSGTVNTANGDISLTANSSTAD
                     IALGGTAALSKFGLQVANAYPANGTVIGADAATFANQSVDGGSITAYDSQGNPVDVNF
                     RWAKINSAASGGT"
     gene            1551..>1796
                     /locus_tag="VHX39_17325"
     CDS             1551..>1796
                     /locus_tag="VHX39_17325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992935.1"
                     /translation="MAADLAGSPGKYLVRGKSLVRVKSACLIATATNGLIMRFEGTSA
                     YVATNDLKIAVNAAIALERPLLVKGEPGTGKTVLAIEI"
BASE COUNT          326 a          523 c          581 g          366 t
ORIGIN      
        1 tcggtgccgc cgctggcagc actattgatc ttggcccagc ggaaattgac gtcgaccgga
       61 ttgccctgac tatcataagc tgtgatcgag ccgccatcca ccgattgatt ggcgaaggtt
      121 gccgcatcgg caccgatcac cgtgccattc gccggatagg cgttggcaac ctgaaggccg
      181 aatttggaca gtgccgctgt gccgcccaga gcgatgtcgg cggtcgagct gttcgctgtc
      241 aagctgatat cgccgttggc cgtgttcact gttccgctca caccggtgag cgcttggatc
      301 tgtgtttgca gctccccgag cgtcgccacc tggccggaac cggtgccgaa ggtgatggtc
      361 tgcgtcgcgc caccgccgac ttgcacggtc agcgtttgtc cctgcgtcac agcgtcttgg
      421 gtcagaaggt tgacagggct gaacgtgttc gcgccggtgg cgaagccgag tgcggagccg
      481 gtgctcccac ttccggtgat cgcgatcgtg gcggtgtaat tgttgccggt gaggaccagg
      541 tttccgcttg ggttgagcga cgcagtgacg gccgccgtgc cggcgttgat tgcgttgacc
      601 aggtcgccga ccgtatcgct gccggtcgat gtgtaggcgg ttgtattggt gccgtcgttc
      661 acggtgatgg tctgaccggc agcaataccc agcgatgcca atgtcgtgct tgtattcaat
      721 ccgcccaccg tacccgtacc aatggccagc gcatcagggt cgagcaaggc accggtccca
      781 gtcattcccg ccgggacggc caatccgttg attgggttag cctcgaaata gctcggatcg
      841 agcaccccgg ccgacggcgt ggccggcaag ttggcctgat aggttatcga tgtggtctgt
      901 tgcgcgggta tgaagtcatg gttgaactgt agaacctgcg gcgaaatgct cgtcgccttg
      961 ccggtgcccg gatcgaccgg gatgcccatc agataatagc cggcgccatt gaccagataa
     1021 ccagcgtcat cgagctggaa atcgccgcgg cgtgtatagt cctgctcgcc tgtaaagttc
     1081 ggcgcgttgc cggagacgcc ggtcggttgc gtcacgacga accagccatc gccctcgatc
     1141 gccatgttgg tggagatcga actgctttgc agggttccgc caaccgtgtt ggttgacgtg
     1201 gaattggcga atacgccgcc ggccgtctgc tggttgagcg cagtctggga gaccagatcc
     1261 tcgaacgacg tgtcggtctc cttgtagccg acggtctgcg agttggcgat gttgccggaa
     1321 atgttttgca gagcgaatga ttgcgactgc agaccagcca cggcggtggt caatgcatcg
     1381 aagataccca tgacttacct ccaacacggt cggcaacgcg acgggccgcc ggtgacgacg
     1441 gatggcacca tgccgcggaa cttggagcaa gccgtgtgcc agccggaaca acccgcaaaa
     1501 tcaatagctt gacgcacgat ccaacgttga cccggggacg gatatgccgg gtggcggcag
     1561 atcttgccgg gtcgccgggc aagtacctgg tgcgcggcaa gtctcttgtg agggtcaaat
     1621 ccgcgtgctt aatcgccacg gcaacgaacg gattgatcat gcgctttgaa ggcaccagcg
     1681 cctacgtcgc cactaacgat ctgaagatcg cggtcaatgc cgcgatcgcg ctggagcggc
     1741 cgcttctggt caagggcgag cccggcaccg gcaagaccgt gctggcaatc gagatc
//
LOCUS       DATAVD010000900         2010 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3624738, whole genome shotgun sequence.
ACCESSION   DATAVD010000900 DATAVD010000000
VERSION     DATAVD010000900.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3624738"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..210
                     /locus_tag="VHX39_17330"
     CDS             <1..210
                     /locus_tag="VHX39_17330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992936.1"
                     /translation="HLALENMGYTITEQHNWGAAALIVVAPPSEAPDQQSTVPADAAA
                     SDRMRPGLFYGAMDSRRPAGLAIGE"
     gene            364..849
                     /locus_tag="VHX39_17335"
     CDS             364..849
                     /locus_tag="VHX39_17335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HEX3992937.1"
                     /translation="MIPDDLVDEAEALLAACRARNVRLATAESCTGGLIAATLTAIAG
                     ASDVVDRGFVTYSNEAKHELIGVPMGLIQTDGAISEAVARAMAEGALARSRATIAVSV
                     TGVAGPGGGTVEKPVGLLWFGLAKRGQPVISEQRMLRGDRTGIRAAAVRHAFAMIRAQ
                     V"
     gene            861..1907
                     /locus_tag="VHX39_17340"
     CDS             861..1907
                     /locus_tag="VHX39_17340"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEX3992938.1"
                     /translation="MAVAVVQPLPGIGDMIWHLPHINAIAAHYGEPVTLVAKPRSLAD
                     QLMEGDPAVRDVLWVDLNPEGRRGAHDGLRGIVRLASELRTRWFRSCIMLHHSHTIAA
                     AALLAGIPDRHGYGWGAQRWLLSGGPYLPKEVARLNPNARATRFLEGAGIALPSAEPR
                     LSVRRKALAEASAVLASLPRPFVALGIGSSEPSRQFGAARHAELAAALLKAGWAAVAL
                     IGGPGDRALADRIVGMMGEYAGRTIPILGLRLQPSAALLSLAAFYVGNNTGMMNLSAA
                     VGVRTYGLFGTYPPFDHASQIVPILSPQGGPEDGMTRMTTDAVLEAIRADRGNLAPRP
                     EVAGEIVGSNTALF"
BASE COUNT          353 a          596 c          686 g          375 t
ORIGIN      
        1 catctcgcgc tggaaaatat gggctacacg atcaccgagc aacataactg gggcgccgct
       61 gcgctgatcg tcgtcgcacc accgagcgag gcgcccgacc agcagagtac cgtgccggcc
      121 gacgcagcgg cgagcgatcg aatgcgaccc ggcctgttct atggcgccat ggattcacgg
      181 cggccagccg gcctggcgat cggggagtga tgcacagcaa gccaatcggc gtggcgtcgc
      241 tgactgttgc cgtcctgaca acgaccaatt accagtcgag cagcacaccg atccgggctt
      301 gcttctgttc agtgacttgt cagaaagctt catccggaac gtttgcctgc caggaacccg
      361 cgcatgatcc ctgatgacct ggtcgacgaa gctgaagcac tgctggctgc ctgccgtgcc
      421 agaaacgtcc ggctcgcaac tgcggaaagt tgcacgggtg ggctgattgc cgccaccctg
      481 accgctatcg ccggcgcatc ggatgtcgtc gaccgtggct ttgtcaccta ttcgaatgaa
      541 gcgaagcacg agttgatcgg ggttcccatg gggttgattc aaaccgacgg agcgatcagc
      601 gaagccgttg cccgggccat ggcggagggc gcattggcac ggtctcgcgc aacgatcgcg
      661 gtctcggtca caggtgtggc cggaccgggc ggcggcacgg tggagaagcc ggtgggcctt
      721 ctgtggttcg gtctcgcgaa acgggggcag ccggtcatca gtgagcagcg tatgctgcgc
      781 ggcgatcgca ccggcatccg ggcggctgcc gtccgccacg ctttcgcgat gatccgagcc
      841 caggtctgag gcacccagaa atggccgtcg cagtagttca gccgttgccg ggcatcggcg
      901 acatgatctg gcacttgcct catatcaatg cgatcgccgc acattatggc gaaccagtca
      961 cgctggttgc caagccgcgt tcgcttgccg atcagttgat ggaaggcgat ccggcggtgc
     1021 gagacgtgct ttgggtggac ctaaacccgg aaggacggcg tggtgcgcat gacgggttgc
     1081 gaggcatcgt ccgcctggcc tccgagttgc ggacccgttg gtttcgcagt tgcatcatgt
     1141 tgcaccacag ccacacgatc gctgctgcgg cgctcctggc cgggattccc gatcgccacg
     1201 gctatggttg gggtgcccag aggtggctcc taagcggcgg cccatatctg ccgaaagagg
     1261 tcgcccgcct caatccaaat gcgcgggcga cacggtttct cgagggcgcc ggcatcgcct
     1321 tgccgtcggc ggaacctcgg ctttcggtac gacgtaaggc acttgcggaa gcgagtgcag
     1381 ttctggcctc cctgccgcgg ccgttcgtgg ctttgggcat cggcagcagc gaaccctcac
     1441 gccagtttgg tgcggcgcgc catgcggagt tggcggccgc cttgctgaag gccggttggg
     1501 cagcggtagc tctgatcggc ggcccaggag atcgggcgtt ggcagatcgg atcgttggga
     1561 tgatgggaga atatgctggc cgcacaatcc ccatactggg cttacggctg caaccgagtg
     1621 cggcgttgct aagtttggcg gcattctatg tcggcaataa taccggcatg atgaacctga
     1681 gtgccgctgt cggagtgcgc acctatgggc tgtttggcac ctacccgccg ttcgaccatg
     1741 ccagccagat cgtcccgatc ctttcccctc agggcggtcc ggaggatgga atgacgcgaa
     1801 tgacaaccga tgcggtgttg gaggcgatcc gggcggaccg tggcaacctc gcgcctcggc
     1861 cagaagtggc gggcgagatt gtgggatcga acacggcact gttctgagag gggcggatgg
     1921 tgaagaaacg ccgtagcttc acagtataaa ggtggggcgg gctgatccga tggggcgctg
     1981 tcggtcaaat ctcagcgcgg gcggtgccgg
//
LOCUS       DATAVD010000901         5457 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2318947, whole genome shotgun sequence.
ACCESSION   DATAVD010000901 DATAVD010000000
VERSION     DATAVD010000901.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5457
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2318947"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2030)
                     /locus_tag="VHX39_17345"
     CDS             complement(<1..2030)
                     /locus_tag="VHX39_17345"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3992939.1"
                     /translation="MAEDEQEQTERLLSLLVEPVWYRARHRDVAASDIDPLRHFIATG
                     LHERRDPNRWFDGTWYVRQYADVAASGAHPLLHYMSEGAKQRRDPHPRFDAAWYSEQH
                     PEAAGNPLLFHLRVGAQRGFLTERPIAIEDWLPSKRTPFVSPEDIVVDVVVPVYRGMD
                     VTRRCLESVLADAERPAGRIIVIDDHTPERPLSAWLDRLAAAGSITLLRNKRNLGFVA
                     SVNRGMRHAADHDVALLNSDTAVPGGWLRRLQAQAYAGVDIASVSPLSNNATICSYLG
                     YEGGPMPAGISLAGIDAACRTVNAGRYADAPTTVGFCMYIRRAALEAVGLFDVETFGK
                     GYGEENDFCLRASALGWRHHIACDTFVQHSGGVSFGADADSGISRAYALLTERYPDYA
                     LRIAEFVDAGETEPCRFAATMALFRASGLPTILVVSHQLDGGVRRHVHDMVQRDAGRA
                     NYLVLEPASRGVAVSIPALPGLPKLVLAAERWRDVAAVALSAGVTRVHIHHLMGLDLD
                     VRALIFELAVKFDVTLHDYFAICPQVTLLPWSAGLYCGEPGPAGCDACIAHRPSHGAT
                     DILSWRLLWAWQFQEAERVFVPSRDALERLRRHGLGARAILAPHEAVTPGPWPICRPR
                     RPGKRLRVVVLGALANHKGAHLVASVAMAADPARLELHVIGDVEADFPATARA"
     gene            complement(2033..2557)
                     /locus_tag="VHX39_17350"
     CDS             complement(2033..2557)
                     /locus_tag="VHX39_17350"
                     /inference="COORDINATES: protein motif:HMM:NF014471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEX3992940.1"
                     /translation="MSATLLQLFWLFALLSMVAFGGGAGVIPDIQRAAVDTHHWLTAK
                     EFLDLFAISRAAPGPGSMIAVLVGQKAAGVAGGAVSFLAMFGPSSVVVYGVARFWNRA
                     ARKPWRAVVERALAPVGIGMTFATGLSLTRGTEHAPLAYAITAVSTLAFAFTSIHPLL
                     LLAAGASIQLLAGG"
     gene            complement(2554..3135)
                     /locus_tag="VHX39_17355"
     CDS             complement(2554..3135)
                     /locus_tag="VHX39_17355"
                     /inference="COORDINATES: protein motif:HMM:NF014471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEX3992941.1"
                     /translation="MATRISPPSVPHTSPSLAELFLGFAAIGMSSFGGGLTAWVRREV
                     VQRRGWMDDQQFLSGYALSQLVPGATNVNLAVFIGTHLRGVRGALACLVGLMALPLLL
                     IYVLGLVYFGMRGMPGGTTISVALSGMGAVAIGLNLGTGISLARHGIRQIVPGVITAT
                     VALSIGVAGIPLLKVLAVMIPVSLLAALLSRPK"
     gene            3193..4215
                     /locus_tag="VHX39_17360"
     CDS             3193..4215
                     /locus_tag="VHX39_17360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3992942.1"
                     /translation="MEYRRLGVSGLKVSPLCLGTMMFGSATDEATASRIVARARDQGI
                     NFIDSADGYGGGRSEEFTGRAIREHRNWWVLATKCFNPTGTGPNARGLSRRHVQHAVE
                     GSLRRLGVDEIDLLYLHKEDHSTPLAETVHALADLIHAGKIRYFGVSNYRSWRVAEIC
                     RICDELGIDRPIASQPLYNALNREVEVEHLPACGHFGLGVVPYSPLARGILTGKYRPD
                     VPPQAGTRAGRQDRRMLESEWRPESLHIAQEIADHARGKGVTPGQFAFAWVLNNRLVT
                     AAIGGPRTEEQWEDYAGALTCHLSPEDEALIDRLVSPGHPSTPGYNDPSYPLEGRPVR
                     QAASRT"
     gene            complement(4194..5276)
                     /gene="rutA"
                     /locus_tag="VHX39_17365"
     CDS             complement(4194..5276)
                     /gene="rutA"
                     /locus_tag="VHX39_17365"
                     /EC_number="1.14.99.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization protein A"
                     /protein_id="HEX3992943.1"
                     /translation="MQVGIFIPIGNNGWLISTTSPQFKPSFDLNRIVVEKAERYGMDF
                     ALSMIKLRGFGGPSEFWDYNLESFTLMAGLAAVTSRIQLFATCAVLTVPPPIAARMAV
                     TIDSISHGRFGLNMITGWQEKEYSQMGIWPGDRHFQHRYDYCSEYVTVMRELWATGHS
                     DFKGEFFQMDDCRCLPMPTRRIPLICAGQSDRGTEFAVAHTDYNFCSSFGINDPHAVE
                     PSTARLVAANEAAGTNCGALVVMMVIAEETDEAAFAKWEHYRTGMDMEALGWRQDQAA
                     ADPNTDKYAGAGRWAEKLRNRMPTMHGALIGSYEHVAAMLDDYATVPGVQGVMLTFDD
                     FVAGMDKFGQRIQPLMATRRHVLEAA"
BASE COUNT         1080 a         1698 c         1767 g          912 t
ORIGIN      
        1 gcgcgcgccg tggcagggaa gtccgcctcg acatcgccga tcacatggag ttcgagcctg
       61 gccggatcgg ctgccatggc cacggaggcc accaaatggg cacccttgtg attggccagc
      121 gcgcccagta ctacgactcg caggcgtttt cctggcctgc gcggccggca aatcggccat
      181 ggaccggggg ttactgcttc gtgcggcgcc aatatcgcac gtgctcccag accgtggcgc
      241 cgcagtcgtt ccagcgcgtc ccggctcggg acgaaaacgc gctccgcctc ctggaattgc
      301 catgcccaca gcaggcgcca tgacaaaatg tcggtcgcac catgcgacgg gcgatgcgcg
      361 atgcaggcgt cgcagccggc cggcccaggc tcgccacagt aaagacccgc ggaccacggc
      421 agtaacgtaa cctgcgggca aatcgcaaaa taatcgtgca gcgtgacgtc gaacttcacg
      481 gccagctcga aaatcaacgc tcgtacgtcg aggtccagcc ccatcaaatg atggatgtgc
      541 acccgcgtca cgccagccga tagtgccacc gccgcgacat cgcgccaccg ttctgctgcc
      601 agtacaagtt tcggcagtcc aggaagtgcg ggaatcgaca ccgcgacccc gcgcgaagcg
      661 ggctccagca ccaggtaatt ggcgcggccg gcgtcgcgct gcaccatatc atgcacgtgc
      721 cgccgcacgc cgccgtcgag ctgatgtgaa accaccagga tcgtcggcaa tcccgaagcc
      781 cgaaacagtg ccatcgtggc ggcgaagcga cacggctcgg tttcgcccgc gtcgacgaac
      841 tctgcgatgc gcaacgcgta gtccggataa cgctcggtca ggagcgcata ggcacggctg
      901 atcccgctat cggcatcggc accaaaactg acgccaccgg aatgctgcac gaatgtatcg
      961 caggcaatat ggtggcgcca acccaaggcc gacgcccgga gacaaaaatc gttttcttca
     1021 ccgtagcctt tgccgaacgt ctccacatcg aacagaccca ctgcctccag ggccgcacgc
     1081 ctgatgtaca tgcaaaagcc gaccgtcgtc ggagcgtccg cgtaacggcc ggcattcact
     1141 gtgcgacagg cggcgtcgat gccggccaaa ctgatgcctg ccggcatcgg accgccctcg
     1201 taaccgagat agctgcaaat cgtcgcatta ttggacaacg gcgaaacact cgcgatgtca
     1261 actccggcat aggcctgcgc ctgcagccgg cgcagccagc cacccggcac cgcggtgtcg
     1321 ctgttcaaca gcgcgacatc gtgatcggcg gcgtgccgca tgccacgatt gaccgaggca
     1381 acgaacccca gattccgctt gttccgcaac aacgtgatgc tgcccgctgc tgccaaccga
     1441 tcaagccagg cactcagtgg ccgctcgggc gtgtggtcgt cgatgacgat gatccggccg
     1501 gctggccgtt cggcatctgc cagcaccgac tccaggcacc ggcgggtcac gtccattccg
     1561 cgatagaccg gcaccaccac gtcgacgaca atatcctcag gcgaaacaaa cggcgtccgt
     1621 ttcgacggta gccagtcctc gatcgcgatt gggcgctcgg tgagaaagcc gcgttgcgcc
     1681 ccgacccgca ggtgaaacaa caaagggttg ccggcggcct ccggatgctg ctcggaatac
     1741 catgcggcat cgaaacgagg atgcggatcg cggcgctgct tcgcgccctc ggacatatag
     1801 tgcagtaacg gatgcgcccc cgaggcggcg acgtcggcat attgccggac ataccacgtt
     1861 ccatcgaacc agcggttcgg atcgcgccgt tcgtgcaggc cggttgcgat gaaatggcgc
     1921 aacggatcga tatcgctcgc cgccacgtcg cgatggcggg cgcgatacca cactggctcg
     1981 accagcaggc tcaataaccg ttcggtctgt tcctgctcgt cctctgccat gctcagccgc
     2041 cggccagcag ctggatcgag gcgccggcag ccagcaacaa caacggatgg attgaagtga
     2101 aggcaaacgc cagtgtgctg accgcggtga tggcataggc cagcggcgca tgttcggtgc
     2161 cgcgggtgag tgaaaggccg gtggcgaaag tcataccgat gccgaccggc gccagagccc
     2221 gctccaccac ggcgcgccag ggcttgcggg cggcacggtt ccagaatcgg gcgacgccat
     2281 agaccacaac gctggagggt ccgaacatgg caaggaatga caccgcgccg cccgccacgc
     2341 cggcggcttt ctggccgacc agcacggcga tcatcgatcc cggtccaggt gccgcgcggg
     2401 aaattgcgaa caggtcaagg aattccttgg cggtcagcca atggtgcgtg tccaccgcgg
     2461 cgcgctggat gtcggggatc accccggcgc cgccgccgaa tgccaccatc gagagtaacg
     2521 cgaacaacca gaacagttgc agcagagtgg cgctcatttg ggtctgctca acagcgctgc
     2581 cagcaggctg accgggatca tgaccgcgag caccttcagc aatggaatgc ccgccacgcc
     2641 gatcgagagc gccactgtgg cggtgattac gcccggaacg atctgcctga ttccatggcg
     2701 ggccagactg atgccagtgc ccaggttgag gccgatcgcg acggcgccca tgccggaaag
     2761 ggcgacgctg atcgtggtgc cgccgggcat cccgcgcatg ccgaaataga ccagacccag
     2821 aacgtaaatg agcagcaacg gtaacgccat aagaccgacc aggcaggcca gtgctccgcg
     2881 cacgccgcgc aaatgagtgc cgatgaacac ggccaggttg acgtttgtgg cgcccggcac
     2941 aagctgcgac agcgcataac cggacaggaa ctgctggtca tccatccagc cgcgtcgctg
     3001 cacgacctcc cgccgcaccc aggcggtcag gccgccgccg aagctcgaca tgccgatggc
     3061 ggcaaagccc agaaacagct cggccagcga ggggctggtg tgggggaccg atgggggaga
     3121 aatgcgagtc gccatgcgac caattaagcc ggtctggtgt agggtgccca gagcagaccg
     3181 gaaggaacga cgatggagta tcggcggctt ggtgtgagcg ggttgaaagt ctccccgctc
     3241 tgcctgggga ccatgatgtt tggcagcgcg acggacgagg cgacggcgtc tcgcattgtt
     3301 gcccgggcgc gtgaccaagg catcaatttc atcgattccg ccgacggtta tggcggaggc
     3361 agatcggaag aattcaccgg ccgcgcgatc cgtgagcatc gcaactggtg ggtgctcgcc
     3421 accaagtgct tcaatccgac cggtaccggg ccgaatgcac gcgggctgtc gcggcggcat
     3481 gtgcagcatg cggtggaggg cagtttgcgg cggcttggcg tggacgagat cgacctgctg
     3541 tacctgcaca aggaagacca ctcgacgccg ttggcagaga cggtgcatgc acttgccgat
     3601 ctgatccatg cggggaaaat ccgctacttc ggcgtatcaa actaccggag ctggcgggtc
     3661 gctgaaatct gccggatttg cgatgaactg ggcattgatc ggccgatcgc cagtcaaccg
     3721 ctgtataatg cgctgaaccg ggaagtggaa gtcgaacacc tgccggcctg cggtcatttt
     3781 ggacttggcg tggtgcccta ttcgccgttg gcgcggggca ttctgacggg caagtatcga
     3841 ccggacgtgc cgcctcaggc gggcacccgc gctggtcggc aggaccggcg gatgttggaa
     3901 tcggaatggc ggccggaaag tctgcacatt gcgcaggaga tcgcggatca cgcgcgaggg
     3961 aagggcgtga ctccgggtca gtttgcgttt gcctgggtat tgaacaatcg gttggtgacc
     4021 gcggcgatcg gtgggcctcg gaccgaggag cagtgggaag attacgctgg cgctctgacc
     4081 tgtcacctaa gcccagagga tgaagctctg atcgatcgat tggtctcgcc tgggcatccg
     4141 tcgacgccgg gatacaacga tccgtcgtat ccgttggagg gcaggccggt gcgtcaggcc
     4201 gcttccagga cgtgacgccg tgtcgccatc agtggttgga tgcgctggcc gaacttgtcc
     4261 atgcccgcaa cgaagtcgtc gaatgtcagc atgacgcctt gcacgcccgg cacggtcgcg
     4321 taatcgtcga gcatcgcggc gacgtgttca taagacccga tcagggcgcc atgcatggtc
     4381 ggcatgcggt tgcgtaattt ctcggcccaa cgtccggcgc cggcatattt gtcggtattg
     4441 ggatcggcgg cggcctggtc ctgccgccag ccaagcgcct ccatgtccat gccagttcga
     4501 taatgttccc attttgcgaa ggcggcttcg tcggtttctt cagcgatgac catcatgacg
     4561 acaagggcgc cgcagttggt gccggctgct tcattggcgg cgacgaggcg ggcggtactc
     4621 ggctcgaccg cgtgcggatc gttaatgccg aagctggaac aaaagttgta gtcggtatgg
     4681 gcgactgcga attccgtgcc gcggtcgctc tgtccggcgc agatcagcgg aatgcggcgg
     4741 gtcggcatcg gtaggcatcg gcaatcgtcc atctggaaga attcgccttt gaagtcgctg
     4801 tggccggtgg cccatagctc acgcatcacc gtgacgtact cgctgcaata atcgtaacgg
     4861 tgctggaaat gccggtcgcc gggccagatg cccatctgcg aatactcttt ctcctgccag
     4921 ccggtgatca tgttcagacc gaaacggccg tgcgagatgc tgtcgatggt gaccgccatc
     4981 cgagcggcga tcggtggcgg caccgtcagc acggcacagg tagcaaacag ctggatgcgg
     5041 ctggtgacgg cggcgagccc ggccatcaat gtgaaacttt caagattgta gtcccagaac
     5101 tccgacggcc cgccgaagcc gcgcagcttg atcatcgaga gagcgaaatc catgccgtag
     5161 cgctcggcct tctccaccac gatgcggttg aggtcgaagc tgggcttgaa ctgcggcgag
     5221 gtggtcgaaa tcagccagcc attgttgccg atgggaatga agataccgac ctgcatggcg
     5281 aggggtttcc ttcggtggcg gcgacgcggg agacttccgg tggatggcga ccagacgggt
     5341 tatgatgcag tgcagcatga atgacggaac cgcgtcaacg cgcgagatgc agacgcgccg
     5401 ggactggcgt cagtcgacgc gctcggccgg atgcaagatc gcatcgatcc ccgcact
//
LOCUS       DATAVD010000902         1535 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_88700, whole genome shotgun sequence.
ACCESSION   DATAVD010000902 DATAVD010000000
VERSION     DATAVD010000902.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88700"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..1343
                     /locus_tag="VHX39_17370"
     CDS             141..1343
                     /locus_tag="VHX39_17370"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX3992944.1"
                     /translation="MGELLRRYWQPIGGASELESNPIKEIRLMGENLVLYRDRGGHYG
                     LIDRHCPHRRADMLYGWIEERGIRCSYHGWLMDETGRCLEQPYEDTTNPKPSKAGCEI
                     KAYPVKECAGLLFAYLGPLPAPELPVWEPFTWRNGFREVVLADIPCNWFQCQENSIDP
                     IHFEWMHDNWGARLRGGERNVAPKHLKLKFESFDHGFTYKRVREGQSEEDRYWTVGRV
                     ALWPNGFYLGSHFEWRVPIDDENTLSVAWFFVRVPKGREPYEQKRVPTWRSPIQDNTG
                     RWITSHVINQDIVAWVGQGRIADRTKEHLRSSDIGITLMRNRFFEELEKIAEGKEPGG
                     LIRSANAAQCIALPNMAREANTEGLPLADFDKDPILRQRLKEFRHHFGQPAEVRREFV
                     EAMGVQGA"
     gene            1402..>1535
                     /locus_tag="VHX39_17375"
     CDS             1402..>1535
                     /locus_tag="VHX39_17375"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX3992945.1"
                     /translation="MRTQVCIIGGGPAGMLLSHILDRNGIDSVVLERQTRAYVLQRIR
                     A"
BASE COUNT          336 a          462 c          465 g          272 t
ORIGIN      
        1 gcgataacgg cctcttcccg aacccgcgca agtagtggaa taattgtccc tgggaaacgc
       61 tcaaaactac aaagaagagg gacgttttgc ttacacccgc acgcaacgag atgctgaccc
      121 gcgtcggccc gggcacgccc atgggcgaac tgttgcgccg atattggcaa ccgatcggtg
      181 gagcgagcga acttgaatcc aacccgatca aggaaattcg ccttatgggc gaaaatctcg
      241 ttctctatcg cgaccgtggt ggccattacg ggctcatcga ccggcattgt ccgcaccggc
      301 gcgccgacat gctttacggc tggatagagg aaagaggaat ccgttgcagc tatcacggct
      361 ggctgatgga cgagaccggc cgctgcctgg agcagcctta cgaggacacc accaatccaa
      421 aaccatcgaa agccggctgc gagatcaaag cctatccggt caaggaatgc gccggcttgt
      481 tgttcgctta tctcggaccg ctaccggcgc cggagctgcc ggtatgggag ccgtttacct
      541 ggcgcaacgg atttcgcgag gtggtgctcg ccgatattcc ctgcaactgg ttccagtgcc
      601 aggaaaattc gatcgatccg attcacttcg agtggatgca cgacaactgg ggcgcccggc
      661 tgcgcggcgg cgagcgcaat gttgcgccca aacacctgaa gctgaagttc gaatcgttcg
      721 atcacggctt cacctacaag cgtgtacgcg aaggccagag cgaggaagac cgctactgga
      781 ccgtgggccg tgtcgcgctg tggccgaacg gcttctatct cggcagccat ttcgaatggc
      841 gggtgccgat cgatgacgag aacacgctga gcgtcgcctg gttcttcgtg cgcgtgccga
      901 aaggccgcga gccttacgag cagaagcgcg tcccgacctg gcgcagtccg atccaggaca
      961 acaccggccg ctggatcacc agtcatgtga tcaatcagga catcgtagcc tgggtcggtc
     1021 agggccgcat cgccgaccgc accaaggagc atctgcgctc aagcgatatc ggcatcaccc
     1081 tgatgcgcaa tcggttcttc gaagaactgg agaaaatcgc cgagggcaaa gagccgggcg
     1141 gcctcatccg cagcgccaac gcggcccaat gcatcgcgct gccgaacatg gcacgagagg
     1201 cgaataccga aggcctccct cttgccgact tcgacaaaga cccgatcctg cgtcagcgct
     1261 tgaaggaatt ccgtcaccat ttcggccagc ccgccgaagt ccggcgcgag ttcgtcgaag
     1321 ccatgggagt ccagggcgcg taattctgga aagacgcgga agcggaattt cggatacgaa
     1381 caggcgggta caaagatcgg catgcgcacc caagtctgca tcatcggcgg cggcccggct
     1441 gggatgctgc tgtctcatat tctcgaccgc aacggcatcg acagtgtcgt gctggagcgg
     1501 cagaccaggg cctatgtgct gcaacgtatt cgtgc
//
LOCUS       DATAVD010000903         2361 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3436963, whole genome shotgun sequence.
ACCESSION   DATAVD010000903 DATAVD010000000
VERSION     DATAVD010000903.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2361
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3436963"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1966
                     /locus_tag="VHX39_17380"
     CDS             <1..1966
                     /locus_tag="VHX39_17380"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphatidylglycerol lysyltransferase
                     domain-containing protein"
                     /protein_id="HEX3992946.1"
                     /translation="GLLLLIGAIYVVQREFRHLRLHDIAAALRAIPPRSLLLSFAWTI
                     LSYFILTFYDRLGTIYAGRAVSYGRVAFASFCAYALAHNLGFAAVSGAAVRYRLYAHW
                     GLTPLQIGKTVAFCTLTFGLGGMVLGGTILLLEPSTIPFFGEHLPAMALRGVGMALWG
                     VVFCYLSLSFILGSIRLRGHQVELPKWRMAILQVALATLDVGVTATIFYVLLPNAPGL
                     TWTIFLGVYVASYTAGLATNLPGGIGVFDTAMLFGLESFVDAPHIVGAILVYRLYYYV
                     IPLFLAGSLFAGNEILLRGGGLLRARTGRAVPRPVAPWSEPDFTVAAATAVVALCGAM
                     LLTLGVLAPSTDYSWLDPEFAGIASQAGQFIPSLIGAGLVIMALALSHRVALAWVLTI
                     LLLLAGGGFATTQDNQVWVTAVLVLSAVMLMPFRSYFYRRASLLSGPFEASTAVSLIV
                     LMICVLALAIARHQTFLLSNNAWWAVVMSREISNSVRFAVALAVVLGSIAIWLLVRPG
                     RVHALPWDASAARRMFLMGAIPPAHADGMITGETDRAGLPFRRIGRVLLGLGDPAGSE
                     SDKISAVWRLRDFARQEGLDPAFWRVGPGLLKVYADLGLTPLPLGMDGQIVQSDETLD
                     PQRRYLVCVAERDLTALMPLLPELAASPAE"
     gene            2059..>2361
                     /locus_tag="VHX39_17385"
     CDS             2059..>2361
                     /locus_tag="VHX39_17385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992947.1"
                     /translation="MTAFCQPLSMGVAEEMLQSVARAVCDRDGDNQQQRESRTRQMVT
                     STLGLAPRDGMELMLATLVFGHFQMILDSMSDVFHGQADALKAKTKTTIVPLGRAML"
BASE COUNT          330 a          696 c          766 g          569 t
ORIGIN      
        1 cggcctgctg ctgctgattg gcgccatcta cgtggtgcag cgagaatttc gccatcttcg
       61 tttgcatgac atcgcggcgg cgttacgggc gattccgccg aggtcgctgc tgctgtcgtt
      121 cgcctggacc atcttgtcgt acttcattct cactttctac gaccggttgg ggaccatcta
      181 cgccgggcgg gcggtgtcgt atggtcgcgt cgcattcgcc tcgttctgcg cttacgcgct
      241 ggcgcacaat ctcggatttg ccgccgtttc gggcgccgcg gtgcgttacc gcctgtacgc
      301 tcactggggc ctgaccccgc tgcaaatcgg caaaacggtc gcattttgca cgctgacctt
      361 cggtcttggc ggtatggtgc tcggcggcac gatccttctg ctcgagccat cgacaattcc
      421 attcttcggc gagcatctgc cggcgatggc gttgcgcggc gtcggcatgg cgctgtgggg
      481 cgtcgtgttc tgctatctgt cgctgtcgtt catcctcggt tcgatccgat tgcgcggtca
      541 ccaggttgaa ttgccgaaat ggcgtatggc aatcctgcag gtcgcgcttg caaccctcga
      601 tgtcggggtc accgccacga tcttttatgt gctgttgcca aacgcgccag gcctcacctg
      661 gacgattttt ctcggagtct atgtcgcatc ctacactgcc gggttggcga ccaatctgcc
      721 gggcgggatt ggtgtgttcg ataccgcaat gttgttcggg ctcgaatcct ttgtcgatgc
      781 gccgcacatc gtcggcgcga ttctcgtgta ccgtctgtat tactatgtca ttccgctgtt
      841 tctcgcgggt tccctgttcg ccggcaacga gatcctgctg cgcggcggtg gtctgttgcg
      901 ggcgcggacg ggacgcgccg ttccacggcc ggtcgcgccc tggagtgaac ccgactttac
      961 tgttgccgct gccactgccg ttgtcgccct gtgcggtgcc atgttgctga cgctcggcgt
     1021 gctcgcgccc agtactgact actcctggct cgatcccgag tttgcaggca tcgcgtcgca
     1081 ggccggacaa tttatcccgt cgctgatcgg tgccggtttg gtgatcatgg ccctggcgct
     1141 gtcacatcgc gtggctctgg cctgggtgtt gacgatcttg ctgctgctcg ccggcggagg
     1201 gtttgcaacg acacaggaca accaggtctg ggtcaccgcc gtgctggttc tcagcgccgt
     1261 gatgctgatg ccgtttcgct cctatttcta tcgccgtgcg tccttgctca gcggtccttt
     1321 cgaggcgtcg acagcagttt ccttgatcgt gctgatgatc tgcgtgctgg cgctggcgat
     1381 cgcgcggcac cagacgttcc tgcttagcaa caacgcctgg tgggccgtgg tgatgtctcg
     1441 cgagatctcc aattcggtgc gctttgcggt ggcgctcgcg gtggtattgg gttcgatagc
     1501 gatctggtta ctggtgcgac ctggccgggt gcacgccttg ccgtgggacg catcggccgc
     1561 tcgacgcatg tttttgatgg gtgccatccc gccggcgcat gcggacggca tgatcaccgg
     1621 tgagaccgat cgcgccggcc tgccattccg ccgcatcggt cgtgttctcc tcggattggg
     1681 cgacccggcc ggctccgaga gcgacaagat atctgccgtc tggcgcctgc gcgattttgc
     1741 ccgtcaggag gggctggacc cggcgttctg gcgggttggg ccgggcttgt tgaaggttta
     1801 cgccgatctg ggactgacgc cgttgccctt ggggatggac ggtcagatcg tgcagtcgga
     1861 cgaaacactc gatccgcagc gccgctacct cgtttgcgtg gcggaacggg acctgacggc
     1921 gttgatgcct ttgttaccgg aactggccgc ctccccggcc gagtaggcgt tccgcgtgca
     1981 gccggggatt cggcttgacg cgattgggtt gtagtgaaaa aaagcctatc aagagattct
     2041 tgcataggca ggttatccat gaccgcattt tgccaaccgc tgtcgatggg tgtcgctgag
     2101 gaaatgctgc agtccgtggc gcgggcagtg tgcgatcggg atggcgataa ccagcagcaa
     2161 cgggaatcca gaacgcgtca gatggtgacg tccacgttgg ggctcgcgcc gcgcgatggg
     2221 atggaactca tgctcgccac tttggtgttt gggcatttcc agatgatcct ggactcgatg
     2281 agcgacgtgt tccacggcca ggcggatgcg ttgaaggcca agaccaaaac aacgatcgtg
     2341 ccgcttggtc gggcgatgtt g
//
LOCUS       DATAVD010000904         1886 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_274757, whole genome shotgun sequence.
ACCESSION   DATAVD010000904 DATAVD010000000
VERSION     DATAVD010000904.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1886
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_274757"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1338)
                     /locus_tag="VHX39_17390"
     CDS             complement(<1..1338)
                     /locus_tag="VHX39_17390"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3992948.1"
                     /translation="MSRFFINRPIVAIVIAILMVLVGLISMLRLPIAQFPSIVPPEIL
                     VQAIFPGANAQTLEQSVATPLEEQISGVDNMNYMYSINGSNGQTQITVDFDVSTDPNT
                     DQVLTQLRTSQAQPQLPAQVTTAGLTVIKSLSSPLLLVALYSPHGSYDSVFLANYGYI
                     NLVDQLTRTPGIARVQVFGAGQYAMRCWVDPDKLAKLQVTVPQIVSALQAQNTVNPAG
                     QIGAEPSPNGQQFTYSVQAQGRLTTPEQFGDIILRANPDGSNLRLKDVARLELGAQTY
                     NLTGRYNGKPSAILAIYQLPGSNAVQAAENVSAAMAKLAKGFPQDLAYQVSLDTTRAV
                     TAGMREILYTLLEALALVVLVVYIFLQGWRATIIPLAAVPVSLIGTFVIFPILGFSIN
                     TLSLFGLVLAIGLVVDDAIVVVEAVERHIHEGMNPRDASLQAMKEVSGPVIATA"
     gene            complement(1340..>1886)
                     /locus_tag="VHX39_17395"
     CDS             complement(1340..>1886)
                     /locus_tag="VHX39_17395"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX3992949.1"
                     /translation="FSITEQEYLALADKIKAEGAGADLLRLKDPVPLQLTLANGNIYP
                     KTGHILFADRSVDPQTGTIRIVGTFANPGNILRPGQFGRITALTSLQQNALVVPQRAV
                     SELQGRYQIALVGPDNKISIRTVQVGNQVGEMWVVQSGLKPGDRVVSQGSSKVRDGEK
                     VTAQPDKLNVVSPYQSQGEAK"
BASE COUNT          411 a          499 c          578 g          398 t
ORIGIN      
        1 ggcagtggca atgacggggc cagagacctc tttcatggct tggagggatg catcgcgcgg
       61 attcatgcct tcgtggatgt ggcgctctac cgcctcaacc accacaatcg cgtcgtcgac
      121 gactaagcca atcgccagca ccaatccaaa cagagagagg gtgttgatag agaagccaag
      181 aatcgggaaa atgacaaaag tgccgatgag ggagaccggg acggcggcta acggaataat
      241 tgtcgcgcgc catccttgca aaaagatgta gacgacaagt acgacgagcg cgagtgcttc
      301 gagcagagtg tagaggatct ctcgcattcc ggcggttacc gcgcgggtag tatcgagact
      361 gacttgataa gcgagatctt gcggaaatcc cttggcgagc ttagccatcg ccgcgctgac
      421 gttctccgcc gcctgcacgg cgttggagcc gggcaattga taaatggcga gaattgcgga
      481 tggcttaccg ttataacggc ccgtgaggtt gtaggtttgc gcgccgagtt cgagccgcgc
      541 gacatctttc agccgaagat tcgatccgtc cgggttggcg cgcaggatga tgtcgccaaa
      601 ctgttcaggg gttgtcaggc ggccttgcgc ctgaacgcta taggtgaatt gctgcccgtt
      661 gggagaaggt tcggcaccga tctgccccgc gggattgacg gtattctgtg cctgcagcgc
      721 ggaaactatc tgtgggacgg tcacctgcag cttggcaagc ttatcgggat ccacccagca
      781 gcgcatggca tactgcccag cgccgaaaac ttggacgcgt gcgatgccag gtgtgcgcgt
      841 caactgatcg acaagattga tgtagccata attcgcgaga aagacactgt cgtacgatcc
      901 atgcggcgaa tacaaagcaa ccagcagcag cggcgaagaa agcgacttga tcaccgtcag
      961 ccctgccgtg gtcacttggg cgggtaactg aggctgcgcc tgggaagtgc gcaattgcgt
     1021 gaggacctga tcggtattgg gatccgtgct gacatcgaaa tcaacggtga tttgcgtctg
     1081 cccattgctc ccgttgatcg agtacatgta gttcatgttg tcgacgccac tgatctgctc
     1141 ttcgagcggt gtcgcaacgg actgttctag agtttgcgca ttggcccccg ggaaaatggc
     1201 ctgcaccaga atttcgggcg gcacgattga agggaactgc gcgatgggaa ggcgcagcat
     1261 ggaaatcaaa cccaccagga ccatcagaat ggcgatcacg atggcgacga tcgggcgatt
     1321 gatgaagaat ctcgacatgc tacttggcct ctccttgcga ttgatagggt gagaccacgt
     1381 taagtttgtc tggctgggcc gtgaccttct ctccgtcccg tactttcgag cttccttgag
     1441 agacgacgcg atcccctggc ttgagaccgc tttgtacgac ccacatctcg cccacctggt
     1501 tgccgacctg aaccgtccga atactgattt tgttgtccgg cccgaccagc gcgatctgat
     1561 agcgtccctg taactcggag actgcgcgct gtggtactac aagcgcgttc tgctgaagcg
     1621 aagtaagagc agtgatgcgg ccaaattggc ccggacggag aatgttgccc gggttggcga
     1681 atgttccgac aatgcggatg gtgccggtct gaggatcgac gctgcggtcc gcaaacagaa
     1741 tgtggccggt tttaggatag atgttgccat tcgccagagt cagttgcagc ggaacagggt
     1801 ctttcagccg tagaagatcc gcgccggcgc cttcggcctt gatcttgtcc gccaaagcca
     1861 gatactcctg ctccgtgatg gaaaag
//
LOCUS       DATAVD010000905         8169 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3063259, whole genome shotgun sequence.
ACCESSION   DATAVD010000905 DATAVD010000000
VERSION     DATAVD010000905.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8169
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3063259"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="VHX39_17400"
     CDS             complement(<1..304)
                     /locus_tag="VHX39_17400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389504.1"
                     /note="LivHMGF is the membrane component of the LIV-I/LS
                     branched-chain amino acid transporter; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease LivH"
                     /protein_id="HEX3992950.1"
                     /translation="MAYALQQLINGVTLGMIYGLIAVGYTMVYGIIGMINFAHGDIFM
                     IGAFLSLIALLGLASLGITAVPIALALALIFAAALAALYGWTVERVAYRPLRGSFRL"
     gene            445..1707
                     /locus_tag="VHX39_17405"
     CDS             445..1707
                     /locus_tag="VHX39_17405"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 87 protein"
                     /protein_id="HEX3992951.1"
                     /translation="MVFAGLINGARHARWLTRGRIVAGGQILLLIELTILVLLALWQH
                     GVISDRITPTSSDFVSFYAAGKLALAHTPGLAYDQAAHFLAEQQFTVAGAPYQYFFYP
                     PVFLLLCAPLALLPYYVAFYGFEIMTLAAFGFVMRQILREPGWSWMGPVLAFPAIFWT
                     FGLGQNAFLTAALFGGFTLFINRRPSAAGLCLGLLCYKPHFGLLAPVALAAGGLWRPF
                     LVAAATVAALVLLSVALFGVGTWQAYFSAFAGSNAVYASGRIDYAGIVTPFGAARLAG
                     LDASLCWLVQALVTAAMAAVVGLTWWRCPIGSLRAATLLAATMLAVPVALLYDRLLLL
                     AAIGWLVQEGRSKGFRPWEKTVLLAAYLGSLLDYAVDSAWHLPLGPLISVAVLALAVR
                     RVVVLRRVGEATTVQSSDRRSGTVSAMV"
     gene            1931..2185
                     /locus_tag="VHX39_17410"
     CDS             1931..2185
                     /locus_tag="VHX39_17410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992952.1"
                     /translation="MHRLLWIAIPLALAGCGGSKSATTLTVTCTGGVQLVGATSVNVL
                     GDVVNGRPTISYPDPVNPAKTGSIAVEPRGTCKVAPQAPS"
     gene            complement(2205..2984)
                     /locus_tag="VHX39_17415"
     CDS             complement(2205..2984)
                     /locus_tag="VHX39_17415"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase family protein"
                     /protein_id="HEX3992953.1"
                     /translation="MILNGKVALVTGAASGIGRACALALAEAGAQIVAADINATGAQA
                     TVDAIAAFQRRAVAVPTDVGDLAQIDNMVKQALATFGQIDILVNNAGVTRRADIMELT
                     EADWDRIHRVNAKGVFFCLQRVAREMIPKRTGRIINIASIAGKGYAGTSNAAYAASKG
                     AVISLTRTASQQLAKHDINVNSICPGVTLTSLSNDNLAVRAREAGVSIEEMQRRRVAD
                     IPLRRANDPEDIAAMAVFLASPGARNITGQNYNVDGGIIPE"
     gene            complement(3029..3904)
                     /locus_tag="VHX39_17420"
     CDS             complement(3029..3904)
                     /locus_tag="VHX39_17420"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX3992954.1"
                     /translation="MNDFAEVAGLRDYPLARRGMMMTGLISGFTLAVDRVEAQTITTD
                     SNGLDVGDTKIPTSSGDLPAYYARPAKGTHFAVVIVIEEIFGVHEHIADICRRLAKAG
                     YLAVATEYYARIADLSKMTDGATIFKEVINKAPDAQFLSDVDATITWAGKNKGDLAHV
                     GVTGFCRGGRQTWLIAENNKRVKAAVAWYGPVLGATSDIQPKTATDGADQLKCPLLGL
                     YGGQDASIKMDDVHAAEAKAKAAHKTVEIVIYPDAPHGFNADYRPSYRKDAAEDGWKR
                     MLAWFAKYGAKPAKV"
     gene            complement(3986..4372)
                     /gene="yajC"
                     /locus_tag="VHX39_17425"
     CDS             complement(3986..4372)
                     /gene="yajC"
                     /locus_tag="VHX39_17425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEX3992955.1"
                     /translation="MLISSAQAQSLGDMFGGAGGVAQFLPLVLIFGVFYFLLIRPQQQ
                     KQKELRNMIASVRRGDRVVTGGGILGTVQRVPMVQDKDGKQVPSQEIEVEIAKDIRVT
                     VLRDTITSVVKPVAANDAKPVKDKAS"
     gene            4450..5301
                     /locus_tag="VHX39_17430"
     CDS             4450..5301
                     /locus_tag="VHX39_17430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3992956.1"
                     /translation="MDDRAVALLTRLTEALERLAPPAPSPIDLYAADAFVWHPSPGHL
                     APVEKVSRVEIGLLKGVEQQKGILLENTMRFVQGLPANNAMLWGARGMGKSSLIKAVH
                     AEVNSRTPGRMVLIEIHREDIRSLPSLLNLLRGKTRRCLILCDDLSFEKEDSDYKALK
                     SVLDGGIEGRPDNVLFYATSNRRHLMPRDMIENERSTAINPNEAIEEKVSLSDRFGIW
                     LGFHNCDQPTYFEMIEGYAASMKLPISVEDLRAKAVEWSVTRGARSGRVAWQCIQDIA
                     GQLGSAA"
     gene            6616..>8169
                     /locus_tag="VHX39_17435"
     CDS             6616..>8169
                     /locus_tag="VHX39_17435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3992957.1"
                     /translation="MKRRMFLAGSAALASPLAAPSIVRAAGTGVLKFIPQSDVTILDP
                     IWTTAYVSRNHGFMIFDTLYGIDNAYKAQPQMVEGHTVENDGKLWKLTLRDGLNWHDG
                     TRVLAGDCVASIQRWGKRDPFGQTLMAYTDELSAADDKTIVFRLNRPFALLPDALGKP
                     GSNFCAMMPERLAKTDAFKQVTEMVGSGPFKWNAAERVVGARAVYDRNTAYQPRPGGV
                     AQWTSGPKVVNFDRVEWHVIPDESTKANALIAGEVDWWENPTADMLPLVRHDSNCEAK
                     VDDETGIMACMRLNQLWPPFNNPAIRRALLGAVDQSEYMTSVAGTDRELWTVPAGFFC
                     PGLPMASNAGLEVFTGKRDLNAVKQAIAAAGYGGEKVVILSPTDQSILKQECDVCADM
                     LKQVGMNVDYQAMDWGTVVQRRAMMDSPEKGGWNLFITGWSGLDQSNPVGHVFLRGNG
                     KSAMFGWPDAPKIEALRQQWIDAPDLAAQQKLAAELQVQAFADVPYIPLGQYFQATAY
                     RKNITDRLNG"
BASE COUNT         1468 a         2493 c         2551 g         1657 t
ORIGIN      
        1 ccaggcggaa cgagcctcgc agcggccgat aggcgacccg ctccaccgtc cagccataca
       61 gcgctgccag agcggccgcg aatatcagcg ccagagccag cgcgatcggc accgcggtaa
      121 tcccgagtga ggccaggccg agcagcgcaa tcaacgacag gaacgcaccg atcatgaaga
      181 tatcgccatg ggcgaaattg atcatgccga tgatgccgta gaccatcgtg tagccgaccg
      241 cgatcagacc atagatcatc ccgagcgtca cgccgttgat cagttgctgc agggcgtagg
      301 ccaggtggcg actccgagga aacgtggcga tccgcagcaa gcacacggtg atctggcctg
      361 gcaaggccgc tcgcaagccg ttgcggtgaa acctttcccg aacacgtcgc cacctaggat
      421 aggccgaccg tactgggcgg acccatggtt tttgccggcc tgatcaatgg agcacgccac
      481 gcgcgctggc tgacccgagg gcggatcgtc gccggcggcc agatcttgct gctgattgaa
      541 ctgacgatcc tggtattgct cgcactctgg cagcacggcg tgatttccga tcggataacg
      601 ccgacatcca gcgacttcgt cagtttctac gcggccggca agctcgcgct ggcacacact
      661 cctgggcttg cctacgacca ggcggcgcat ttcctggccg agcagcagtt cacggtcgcg
      721 ggcgcgccat accagtattt cttctatccg cccgtgttct tgctgctgtg cgcgcccctc
      781 gcattgttgc cctactacgt cgcattctat gggttcgaaa tcatgacgtt ggcggcgttc
      841 gggttcgtca tgcggcagat tttacgggag ccgggctggt cctggatggg tcccgtgctg
      901 gcctttccag ccattttctg gacctttggt ttgggccaga acgcattttt gacggccgct
      961 ttgttcggcg ggttcaccct gtttatcaat cgccgcccgt ccgcggctgg cctgtgtttg
     1021 ggcctgcttt gctacaaacc gcacttcgga ttgctggccc cggtagcact ggcggccggc
     1081 ggcctttggc gcccattcct ggtggccgct gcaaccgtcg ccgctcttgt cctgctctcg
     1141 gttgcgttgt tcggcgttgg cacctggcag gcctattttt cggcattcgc cgggtccaac
     1201 gcagtttatg cctctggccg gatcgactac gcgggcatcg taacgccgtt cggggcagca
     1261 cggctggcgg gccttgatgc gtcgctatgc tggctggtgc aggcgctggt gaccgctgca
     1321 atggcagccg tggtcgggtt gacctggtgg cgctgtccga tcggtagcct gcgcgccgcg
     1381 acgctgctcg ccgcgaccat gttggcagtc ccggtggcgc tgctgtacga ccggttactc
     1441 cttttggcgg caatcggttg gctggtgcag gaaggccgca gcaagggctt tcgaccctgg
     1501 gaaaagaccg tgttgcttgc ggcttatctt ggttccctgc tggactacgc agttgactcg
     1561 gcctggcatt tgccactggg cccattgatc agcgtcgcgg tgctggccct cgccgtgcgt
     1621 cgggtggtgg tgctgcggcg ggtcggcgaa gcaacgaccg tgcaatcgag cgaccgtcgc
     1681 agcggcactg tttcggcgat ggtgtaaccc cggccatcca tccgccgctg gtgtgaccac
     1741 aaatttgatc cggacggcac caagaaccag actggtctgg ttcagccaaa gaccctatag
     1801 gcatgccgct gcaacggtcg aaaccctgcc gctgctgtat ctgcaacctt ggtacttcgg
     1861 cgccgaaatt gttccttggc cgaatcgcct gcccgccgac accatgaatt tcgcctgtgg
     1921 agaacgcctc atgcatcgac tgctctggat cgcgatcccc cttgcgctcg ccggttgcgg
     1981 cggcagcaaa tcggcgacga cgctgaccgt tacctgcacc ggcggcgtcc aactggtggg
     2041 cgccacctcg gtgaatgtgc ttggggacgt ggtcaacggg cggccgacga tcagttatcc
     2101 agatccggtg aacccggcga aaaccgggtc gatcgctgtg gagccgcgcg gcacctgcaa
     2161 ggtcgcaccg caggcaccaa gttgattgcc tgtcagtccc gctatcactc cggaatgata
     2221 cctccgtcga cgttgtagtt ctgcccggtg atgttgcgcg caccaggcga ggcgaggaac
     2281 actgccatcg ccgcgatatc ctcagggtcg tttgcccgtc gcaggggaat atccgccacc
     2341 cgccggcgtt gcatttcttc aatgctcacc ccggcctcgc gcgcccgcac cgccaggttg
     2401 tcgttcgaca gtgatgtcag ggtcacgccc ggacaaatcg aatttacatt gatgtcgtgt
     2461 ttcgcaagtt gctgcgatgc ggtgcgggtc aggctgatca ccgctccctt gctggcagcg
     2521 taggcggcgt tcgaggttcc cgcataacct ttgccggcaa tcgaggcgat gttgatgatg
     2581 cggcccgtcc gtttcgggat catctcgcgc gccacccgtt gcagacagaa gaacacgcct
     2641 ttggcgttga cccggtggat gcggtcccag tcggcctcgg tcaactccat gatgtcggcg
     2701 cggcgggtga cgccggcatt gttcaccagg atgtcgatct ggccgaaggt tgccagcgcc
     2761 tgcttcacca tattgtcgat ttgtgcaagg tcgccgacat cggtcggcac cgcgacagca
     2821 cgtcgttgga acgcggcaat ggcgtcaacc gttgcctgcg ctcctgttgc attgatgtca
     2881 gcagcaacga tttgagcgcc ggcctcggcc agcgccaaag cgcaggcacg gccaataccg
     2941 gatgcggcgc cggtaaccag cgcaactttg ccgttgagta tcatgttcgc ctcccccaga
     3001 gggatcaggt tggggatcag gttggggatc agactttcgc aggtttcgcg ccgtacttgg
     3061 cgaaccaggc gagcatgcgc ttccacccgt cctcggcggc gtccttgcgg tagctcggcc
     3121 ggtaatcggc attgaagccg tgcggcgcgt cgggatagat cacgatttcc accgttttat
     3181 gcgcggcctt cgctttggcc tcagcggcgt gtacgtcgtc catcttgatg cttgcgtcct
     3241 gcccaccgta aagcccgagc agtggacact tcaactgatc ggcaccatcg gtggcggttt
     3301 tcggctgaat gtcggaggtc gcgccaagca cgggaccgta ccaggccacc gcggccttca
     3361 ctcgtttgtt gttttccgcg atcagccagg tttgccgccc gccgcggcag aacccggtca
     3421 caccaacatg cgcgagatcg cccttgttct ttccggccca ggtgatggtg gcgtcgacgt
     3481 cggagaggaa ttgggcgtca ggtgccttgt tgatgacttc tttgaagatg gtcgcaccat
     3541 cggtcatttt cgaaagatca gcaatccgcg cgtaatactc ggttgccacg gcgagatagc
     3601 cggcctttgc aaggcggcgg cagatatccg cgatgtgttc gtgcacgccg aagatttctt
     3661 caatgacgat cacgaccgcg aaatgtgtac ccttggcagg acgggcgtaa taggcgggca
     3721 aatcgccgct cgaggtcggg attttggtat ctccgacatc gagcccattg ctgtcggtgg
     3781 tgatcgtctg cgcctccacc cggtcgactg ccaacgtgaa gccactgata aggccggtca
     3841 tcatcatgcc gcggcgcgcg agtgggtagt cacgtaggcc ggcaacttcg gcgaaatcgt
     3901 tcattttgaa cctccacgtc ttgttggcgc gtgacgattc acgcgatcgg aacgccgggt
     3961 ggatgaccgt tcgagggcgc cgggttcagc tcgccttgtc ttttaccggc ttcgcgtcgt
     4021 tcgcggcgac cggcttcacc accgaggtga tggtgtcgcg cagcacggtg acgcggatgt
     4081 ccttggcgat ctcgacctcg atttcctgcg acggcacctg cttgccgtcc ttgtcctgca
     4141 ccatcggcac gcgctgtacc gtgcccagga tgccgccgcc agtaacgacc cggtcgccac
     4201 gacggaccga ggcaatcatg ttgcgcagtt ccttttgctt ctgctgctgc ggccggatca
     4261 gcaggaagta gaacacgccg aagatcagca cgagcggcaa aaactgcgcc accccgcccg
     4321 cgccaccaaa catgtcaccc aaactctggg cctgggcaga ggagatcagc atcgacgggg
     4381 tccttgcggt gaattgagcg ggaccatact ttccgcgccc ctttcgtcaa gctcgtctgg
     4441 atttttccca tggatgaccg tgccgtcgcc ttgttgaccc gtctgaccga ggcgttggaa
     4501 cggctcgcgc cgccggcgcc ttcgccgatc gacctctacg ccgcggacgc tttcgtatgg
     4561 cacccctccc ctgggcatct ggcgccggtg gagaaggtgt cgcgcgtcga aatcggtttg
     4621 ctgaagggtg tggaacaaca aaagggcatc ctgctggaga acacaatgcg cttcgtccaa
     4681 gggctgccgg caaacaacgc catgctgtgg ggcgcgcggg ggatgggcaa gtcctcgctg
     4741 atcaaggcgg tgcacgcgga ggtcaattcc cggactcccg gccggatggt gctgattgag
     4801 atccaccgtg aggacatccg ctcgctgccg tcgttactca acctgctgcg cggcaagacg
     4861 cggcggtgcc tgatcctgtg cgacgatctg tcgttcgaga aagaggattc cgactacaag
     4921 gcgctgaagt cggtgctgga tggcgggatc gagggccggc cggataacgt gctgttctac
     4981 gcgacctcga accgccggca tttgatgccg cgcgacatga ttgagaacga acgctcgacg
     5041 gcgatcaacc cgaacgaggc gatcgaggag aaggtttctt tgtcagatcg tttcggcatt
     5101 tggctgggat ttcataattg cgatcagcca acatatttcg agatgatcga aggttatgca
     5161 gccagtatga aattgccgat ttcggttgag gatttgcgtg ccaaagcggt ggaatggtcg
     5221 gtgacgcgcg gggctcgatc gggccgcgtc gcatggcaat gtattcagga tattgctggc
     5281 cagttgggca gtgccgctta acggcttctt cattcctcag gcccaaaatt cccaggccgg
     5341 cgggaatgac cccgccggcc ctccagaacg gagaatagga tgttacagca tcttctcctc
     5401 ctgttgctga tcgtggtgat tcctttccga aaagtcaagg tcaccatcga gacgcgatag
     5461 gggcggcggg ccggtccgtt cgcgggccgg cctacccctg gtggtgcgaa tacgactgtg
     5521 tgtcaggctg gcttttatcg cgcgcatgca ccgagagttt ttaattagag accctgcctg
     5581 aaactgcatc gcagtccgag gcctgtgcat ggcgatccaa agatacgatt ctgccataac
     5641 ggaactttgg ctgctccggt tagttccatc ctggatcgcc aacgcactgt ctaacgcact
     5701 gtcttatgtc agactcagga ggcaagcatg aggtggtttc tctcggtagc agcagttatg
     5761 gcgctcacag cgtgcacccc gccgccgcca accacgacca caacgacgac gagcaccacc
     5821 acaacgacga tgcctccgcc gctgttgcct cctgcaccgg ttgttgcttc aggcccagct
     5881 gaccccggca actgcgggac gcccgatatg cccgaagcct gtccaccgat gccgcggcac
     5941 gcgctgccat actacccggc aggcagacaa taattcggca cgcgaacatt tgagaaattg
     6001 ggcttctcga ggataggctc gcgtcttggc ggcggcacgg tcgcaaacct gccgcctgac
     6061 gcgacaaagg aaaccggcat gtactcaccg ctccctcacc gcatcaggct tcgagtgggc
     6121 ttggctatcc tcgccgtcct gctgctgatt ggtttcgtgg cgacgttcgg cgtggtgcac
     6181 acgccctgag atcggacgaa gcaggcggtt gtgtgacagg gtgcggggtt gcaacgccga
     6241 cgccggtgat gccctctgcg cctcgcgcac ccgattcaac gttgctatcg ttgtgatgca
     6301 ccgacaaaat cccggtggta ccgtccgcgt gggcgatgcg gtattcgacc ggtcttcccc
     6361 cgccgggcca gcgacgccgg ttaagatgat gcgatcgtcc agccgccgag gtgacacctc
     6421 gccggcgctt tgccgccggt agacgttggt cagacagacc gcgaagacgt ttcatcccga
     6481 caagggataa cgccaaccac ctcggcagcg taaaagggcg ccgcgggaca tcaggcccgt
     6541 acgaaaccgc ttgcgcgccg cgcatttcga ggcaaagatg ctgcagtgca acatgtctcg
     6601 aaggaggctc ccatcatgaa gcgccgcatg ttcctggccg gcagcgccgc cctcgcgagc
     6661 ccgctggccg ccccatcgat cgtgcgggcc gccgggaccg gagtgctcaa attcattccg
     6721 cagtcagacg tgacgattct ggatccgatc tggaccacag cttatgtcag tcgcaaccat
     6781 ggcttcatga ttttcgacac gctctatggc atcgacaacg cctataaagc gcaaccgcag
     6841 atggtcgagg gacacaccgt cgagaacgac ggcaagttgt ggaaattgac gttgcgcgat
     6901 ggcctgaact ggcacgacgg cacgcgcgtg ctcgcaggcg actgcgtggc gtcaatccag
     6961 cgctggggca agcgcgatcc gttcggccag accttgatgg cctataccga cgaactctcg
     7021 gccgctgacg acaagacgat cgtgttccgt ctgaaccgcc cgttcgcgct gttgcccgac
     7081 gcgctgggca agcctggctc aaatttctgc gcgatgatgc cggagcgttt ggcaaagacc
     7141 gacgcgttca agcaagttac cgaaatggtg ggcagtgggc cgttcaaatg gaacgccgca
     7201 gagcgggtgg tcggagcacg cgccgtgtat gaccgcaaca ccgcgtatca gccgcgcccc
     7261 ggtggggtcg cgcaatggac ctctggaccg aaagtcgtga attttgaccg ggtcgagtgg
     7321 catgtcattc cggacgaaag caccaaagcc aatgcgctga tcgccggcga ggtcgattgg
     7381 tgggagaatc cgacggccga tatgttgccc ctggtgcggc atgattccaa ttgcgaggcc
     7441 aaggtcgacg atgagaccgg catcatggcc tgcatgcggc tcaatcagtt gtggccgcca
     7501 ttcaataatc cggccatccg tcgcgctctg ttgggggctg tcgatcaatc cgaatacatg
     7561 acttcggtgg ccggcaccga tcgcgaattg tggactgtgc ccgccggttt cttctgtccg
     7621 ggtctgccga tggcgagtaa cgcgggcctc gaggtgttca ccgggaagcg ggatctcaac
     7681 gccgtcaaac aggcgattgc ggccgccggg tacggcggtg aaaaagtcgt catactgtcg
     7741 cccaccgacc agtcgatcct gaaacaggag tgcgacgtgt gcgccgacat gctgaagcag
     7801 gttggcatga acgtcgacta tcaggcgatg gactggggca cggtggtaca gcggcgggcg
     7861 atgatggatt cgccggaaaa aggcggctgg aacctgttta tcaccgggtg gtccgggctc
     7921 gatcagtcca atccggtggg ccacgtgttt ctgcgcggca acggcaagag cgccatgttc
     7981 ggctggcccg acgcgccaaa aatcgaggcg ctgcggcagc aatggatcga cgcgcccgat
     8041 ctggcggcgc agcagaaact cgctgccgaa ttgcaggtgc aggcgtttgc cgacgttccg
     8101 tacattccgc tcgggcagta ttttcaggcg acggcgtatc gcaagaacat caccgaccgg
     8161 ctgaacggg
//
LOCUS       DATAVD010000906         5248 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1762728, whole genome shotgun sequence.
ACCESSION   DATAVD010000906 DATAVD010000000
VERSION     DATAVD010000906.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5248
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1762728"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..213)
                     /locus_tag="VHX39_17440"
     CDS             complement(<1..213)
                     /locus_tag="VHX39_17440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992958.1"
                     /translation="MPFEGIGASVRRKEDARFLNGRGHYTDDINRPGQLYAYMKRSDR
                     PHAKINGIDTSAAAKAPGVAAVFIGAD"
     gene            complement(238..717)
                     /locus_tag="VHX39_17445"
     CDS             complement(238..717)
                     /locus_tag="VHX39_17445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX3992959.1"
                     /translation="MPQVTLTVNGKQHTVEVENRTLLVELLREKLALTGTHVGCDTSQ
                     CGACVVHVDGISAKSCTMLAVQAQGTSVITIEGLAAADGTLHPMQEMFREHHALQCGF
                     CTPGMVMSAIDLVNSHPDSLTEQEIRDGLEGNLCRCTGYHNIVKAIAAAHPLMHAKA"
     gene            907..1110
                     /locus_tag="VHX39_17450"
     CDS             907..1110
                     /locus_tag="VHX39_17450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992960.1"
                     /translation="MSKFLAETEATIMTWHGITAPNEPGRRLTEELTDTIAAFERLRG
                     TLVFEDEPASFEAALQATKETAA"
     gene            1107..2528
                     /locus_tag="VHX39_17455"
     CDS             1107..2528
                     /locus_tag="VHX39_17455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX3992961.1"
                     /translation="MSNLGDLSMTEAADAVRSGDVKSVDLLEACWQRMDALNPTLNAV
                     IWTDREDAFVAARAADAAVRNKAKTGALHGVPMMHKDMYYQAGKLSTCGSALRRNWRP
                     NVTATVIERLAAAGAYTFGGLNMAEFAQNPTGHNKTFGDCHNPWNPPYITGGSSSGSG
                     ASVAARFNYMALGSDTGGSIRLPASANGVSGLKPTQTRVSRFGVMPLSFTHDNVGPLT
                     RTVRDCARVMTVIAGHDPRDPTSARESVPDYEAALTGDIRGQRIGVPTNVFFDDADVP
                     VTAAIEQALAVLRARGAVITRLSLPVMEAVATYGSIVSRVEAATIHAEWMRSDPQAYG
                     AHISGRMYPGYAIPAPYYVEALSRRGPVLRAFAAEVFAKVDVLVTPTIRTCLPTLEAT
                     DIDHGPPGTETKFMAVSANTRPFNYLGLPAISVPCGFDPNGCPIGLQIAGRPFAEARV
                     MKLADAYQRDTDFHSRRPPILKD"
     gene            2531..3529
                     /locus_tag="VHX39_17460"
     CDS             2531..3529
                     /locus_tag="VHX39_17460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEX3992962.1"
                     /translation="MPLPKIAFIGTGGTIASLGRGPLDLQDYGSIGNVMHAEEIVAKW
                     PVVHQVAEVIPVKYRNIPSTAIDFADWKALAALCRQLPQDHPGLDGIVIGHGTATLEE
                     TAYFLNLTLKTAIPVVLVGAQRPSSALSSDAGMNLVNGIRVAASPDSRGMGVLVLLND
                     EIHAAREVTKTSTLRLQTFRTPDFGVLGHADGDAVVYYRQPVRRRAPDTEFDISEIDA
                     LPRVDISYSYAGGDGTAVRAFVAAGARGIVSAGFAPGFTPPGEAEALKDAASQGIVVV
                     QSTRAGSGRTFRGSRLQANGLLIADNLNPQKARILLTLALTRSQNPDEIMRIFRTY"
     gene            3529..4359
                     /locus_tag="VHX39_17465"
     CDS             3529..4359
                     /locus_tag="VHX39_17465"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3992963.1"
                     /translation="MVDFDPDAVREFERAGWNRAAAGYDLSFATATRQFIEPLLEAAA
                     IEAGAGVLDLCCGPGFVGAGARERGASVTGCDFSTAMLEQARARFPGIVFDYGDAEAL
                     PYRDTNFDAVVSNFGVHHVPRPALALAEVYRVLRPGKKFAFSIWAGHDENIAWKLVFD
                     AIGRDGDLRVSAAPRPGGGFANAADCLAALNIAGFVETDARLVRGNWQHKDAASMLAA
                     LRAGTARMAALIDAQADTAMPGILAALETATAPFHIPGSDGGQLSVPIACYIASGIRR
                     "
     gene            4329..>5248
                     /locus_tag="VHX39_17470"
     CDS             4329..>5248
                     /locus_tag="VHX39_17470"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HEX3992964.1"
                     /translation="MLYRLRDQTLTPRARRSREGRRRIAGGFAVSLLLHTVILAALLV
                     RLKWEPEPELLPPPATVSMVFEGGRPQGPSAPEPTPLPGSAIEQTAPTQSEAPPAQPG
                     TPPPLPEATPQPPARPPPPTVQRETPTPPEPPPPVRTAPPTPQPSTPVEPEPSEVTVP
                     PPQPVTPPTAPPIPQRKPPTPANPSLPQTWPPIRQAAPATRPSDFPAPMDFSLGAPPA
                     KSGALAMGKPLLSLTLPHRGPGDPTPYSFETDAEVGTDCRNLLSQWVESHSYYPSQAA
                     EMNQQGTARVLVTALPNGQVTSVELERGSGS"
BASE COUNT          919 a         1714 c         1666 g          949 t
ORIGIN      
        1 gtcggcgccg atgaataccg cagccacgcc cggtgccttc gctgcggcgc tggtgtcaat
       61 accgttgatc tttgcatgcg gccgatcgga ccgtttcatg tacgcgtaca actgtcctgg
      121 acggttgata tcgtccgtgt aatggccgcg gccgttgaga aagcgcgcgt cttcctttcg
      181 gcgaacggat gcaccgatcc cttcgaaggg catggcgtta tctccctgat ctggcgatta
      241 tgctttggcg tgcatcaatg gatgcgcggc tgcgatcgct tttactatgt tatgataacc
      301 ggtgcagcgg cacagattgc cctccagccc gtcacggatt tcctgttccg tgaggctgtc
      361 gggatggctg ttcaccaggt cgatcgctga catcaccatt ccgggagtac agaatccgca
      421 ttgcaaagcg tgatgctcac ggaacatttc ctgcatcggg tgcagcgtgc cgtccgccgc
      481 ggcaaggccc tcgatggtga tcacgctggt gccttgcgcc tgcaccgcca gcatcgtgca
      541 cgacttggcc gagatgccgt cgacatgcac cacgcaagca ccgcattggg aggtgtcgca
      601 accgacatgg gtcccggtca gcgccagttt ttctctcagc aattccacaa gcagagtgcg
      661 gttttccacc tctaccgtgt gctgctttcc gtttaccgtc agggtgacct gaggcatcgc
      721 gctctccctt tgtctcatcc aaacgcccgt tccgagtgtg gtcatgcggc gtgccggggt
      781 caagcggtgg ccagattgtc ctaagagtca tccgctcgtg tgcgcccacg atgtgtggcc
      841 cgatccatgg tgcagtgcca tactcgctgc ggcgccccga acgagggcac gatcagtggg
      901 gcaaccatga gcaaattcct ggctgagacc gaagcgacga ttatgacctg gcacggcatt
      961 accgcgccca acgagcccgg tcgccggctg accgaggaac tgaccgacac cattgccgcg
     1021 ttcgaaagac tgcgcggcac attggtgttc gaggacgagc cagccagctt cgaagccgct
     1081 ctgcaggcga cgaaggagac ggcggcatga gcaacctcgg cgacctgtcg atgaccgagg
     1141 cggccgatgc cgtccgttcc ggcgacgtga aatccgtcga tctgctcgag gcgtgctggc
     1201 agcggatgga cgcgctgaac ccgacgctca acgcggtgat ctggaccgac cgggaggacg
     1261 ctttcgtcgc cgcgcgcgcc gccgacgccg cggtgcggaa caaggccaaa accggtgcgc
     1321 tacacggcgt gccgatgatg cacaaggaca tgtattacca ggccggcaag ctgagcacct
     1381 gcggttcggc gctacgccgc aactggcgcc cgaacgtaac cgcaaccgtg atcgagcggc
     1441 tcgcagccgc cggcgcctac accttcggcg gcctgaacat ggccgagttc gcgcagaacc
     1501 cgaccggcca taataagacg tttggcgact gtcacaatcc gtggaacccg ccttacatca
     1561 caggtggatc ttcctccgga tccggtgcat ccgtggcggc gcggttcaac tatatggcgc
     1621 ttggctcgga caccggcggg tcgatcagac tgccggcttc ggccaatggc gtcagcggcc
     1681 taaagcccac gcaaacccgc gtgtcgcgct tcggcgtcat gccgctgtcg ttcacgcatg
     1741 acaatgttgg cccgttgacc cgcacagtgc gcgattgcgc gcgcgtcatg acggtgattg
     1801 ccggccacga cccgcgcgac ccgaccagcg cgcgcgagtc ggtgcccgat tacgaagcgg
     1861 cgctcaccgg ggatattcgc ggccagcgca tcggtgtccc aaccaacgtc ttcttcgatg
     1921 acgccgacgt cccggtgacc gcggcgatcg aacaggcact tgcagtgctg cgggcgcgcg
     1981 gcgcggtgat tactcggctg agcttaccgg tgatggaggc ggtcgccacc tatggcagca
     2041 tcgtctcccg cgtcgaggcg gcgaccatcc acgccgaatg gatgcgttcc gatccgcagg
     2101 cttatggcgc gcatatcagc gggcggatgt atcccggcta tgccattccg gcgccgtact
     2161 atgtcgaggc gctcagccgc cgcggacctg tgctgcgggc atttgccgcc gaggtatttg
     2221 ccaaggttga cgtgctggtt acgccaacga tccgcacctg cctgccgacg ctggaagcga
     2281 ccgacatcga ccacggtcca ccggggaccg aaaccaaatt catggcggtc tccgccaaca
     2341 cgcgaccgtt caattatctc ggcttaccgg caatcagcgt gccgtgcggc ttcgatccga
     2401 acggttgccc gatcggtttg caaatcgccg gccgtccgtt cgccgaggcg agggtcatga
     2461 aactggccga cgcgtatcag cgcgacaccg atttccactc tcgtcgtccg ccaattctga
     2521 aggactgacc atgccgctcc ccaaaatcgc cttcatcggc accggcggta ccatcgcatc
     2581 actgggccgt ggtccgctcg atctgcagga ctacgggtcc atcggcaacg tcatgcacgc
     2641 cgaggagatc gtcgcgaaat ggccggtggt gcaccaggtc gccgaagtca ttcctgtcaa
     2701 gtatcgtaat atcccgagca ccgccatcga cttcgccgac tggaaagccc tggccgcgct
     2761 gtgccggcaa ttgccgcagg accatcccgg cctggacggc atcgtcatcg gccacggcac
     2821 cgcgacattg gaggaaaccg cgtatttcct caatctgact ctgaaaacgg cgatcccggt
     2881 tgtgctggtc ggcgcgcaac ggccatccag cgctttgtcg tccgacgccg ggatgaatct
     2941 cgtcaacggc atcagggtcg cagcgtcgcc cgactcgcgt ggcatgggcg tgctggtgct
     3001 gctcaacgac gaaatccatg cggcccgcga ggtcacgaaa acctcgacat tgcgcctgca
     3061 aacgttccgc acgccggact ttggcgtgct tggccacgct gacggcgacg cggtggtgta
     3121 ttaccggcag ccggtgcgcc gccgcgcgcc cgacaccgag ttcgatattt ccgaaattga
     3181 cgctttgccg cgggtcgaca tttcatattc gtacgcgggc ggcgatggga ccgccgtgcg
     3241 ggcgttcgtc gcagcgggcg cgcgcggcat cgtgtcggcc ggattcgcgc ccgggtttac
     3301 gccgccgggt gaggcggagg ctctgaagga tgcggcttcc caagggatcg tcgtcgtgca
     3361 atcgacccgc gcaggatcgg gacggacgtt ccgcggctcg cgactccagg ccaacgggct
     3421 gttgattgcc gataatctca atccgcaaaa ggcgcgaatc ctgctaacgt tggcgctgac
     3481 caggagccag aatccagacg agatcatgcg tatattccgg acctactgat ggtggatttc
     3541 gaccccgatg cggtgcgcga gtttgaacgc gccggttgga atcgcgcggc cgctggctat
     3601 gacctgtcgt ttgccacggc gacacggcag ttcatcgaac cgctgctgga agcagccgcg
     3661 atcgaggccg gtgccggtgt gctcgacctt tgctgcggcc caggatttgt gggggcggga
     3721 gcaagggaga ggggcgcgag cgtgaccggc tgcgatttct ctaccgcaat gctggaacag
     3781 gcacgggcaa gattccccgg gattgtgttc gattatggtg acgctgaggc gttgccctac
     3841 cgagacacaa acttcgatgc ggttgtctcg aatttcgggg tccatcacgt gccgcggccg
     3901 gctctggcgc tcgccgaggt gtatcgcgtc ttgcggccgg ggaagaaatt cgcgttcagc
     3961 atttgggctg gccacgatga aaatattgcc tggaagctgg tgttcgatgc gatcggccgg
     4021 gacggcgatc tgcgtgtttc ggcagcacct cggcccggag gcggctttgc gaatgcggca
     4081 gattgcctgg ccgcgctaaa cattgccgga tttgtcgaaa ccgacgcccg gctggtccgc
     4141 ggcaactggc agcacaaaga tgcggcctcg atgctggccg cgctgcgcgc cgggacggct
     4201 cggatggcag cgctgatcga cgcgcaggcc gatacggcga tgccgggaat cctggctgcg
     4261 cttgagacgg ccactgcgcc atttcacatt cccgggtctg acggcggtca actatcggtg
     4321 ccgatcgcat gttatatcgc ctccgggatc agacgctgac cccacgagcg cgccgctcca
     4381 gggaggggcg gcgccggatc gccggcggtt tcgccgtctc gttactgtta catactgtga
     4441 tactggcggc gttgctggtg cgcctgaaat gggagcccga gcccgaactg ctgccgccgc
     4501 ctgccaccgt cagcatggta tttgaaggcg gccgtccgca agggccgagt gcgccggaac
     4561 cgacccctct gcctggatct gccatcgaac aaacggctcc gacccaaagc gaggccccgc
     4621 cggcacaacc cgggacgccg ccgccgctcc ccgaggcgac gccgcagccg cctgcgcgac
     4681 ccccgccgcc aacggtgcag cgcgaaaccc cgacgccgcc tgagccgcca ccgccggtta
     4741 gaaccgctcc accgacgccg cagcccagta caccggtcga accggagccg tcggaggtaa
     4801 cggtacctcc gccgcagccg gtaacaccgc cgacggcgcc gcccattcca cagcgtaagc
     4861 caccgacgcc ggcgaatccg tcgctgccgc aaacctggcc gccgatcagg caggcggcac
     4921 cggcaacgcg gccgtcggat ttcccggcgc cgatggattt ctcgcttggt gctccaccgg
     4981 ccaaatcggg cgcgctggca atgggaaagc cgttgctgtc gctgaccctg ccgcatcggg
     5041 ggcctggcga tcctacgccc tattcattcg agaccgatgc cgaagtgggc accgactgtc
     5101 gcaacctcct gagccagtgg gtcgagagcc attcctatta tccatcccag gcggccgaaa
     5161 tgaaccagca gggcacggcg cgggtcctgg tcaccgcatt gccgaacggc caggtcacct
     5221 cggtcgaact ggagcgggga tccggttc
//
LOCUS       DATAVD010000907         1507 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3249334, whole genome shotgun sequence.
ACCESSION   DATAVD010000907 DATAVD010000000
VERSION     DATAVD010000907.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3249334"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..647)
                     /locus_tag="VHX39_17475"
     CDS             complement(<1..647)
                     /locus_tag="VHX39_17475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TCP-1/cpn60 chaperonin family protein"
                     /protein_id="HEX3992965.1"
                     /translation="MAKIMLHDDAARQALGRGVAQLAKAVRGTLGPRGMNAIIDRPIG
                     TPIISRDGVTIAAEVELEDPFENMGAQVTREVSMKTNEVVGDGTTTATILADAMVQQG
                     LAALDAGANPVDLVRGLEQAVEQVSAALLASATRLKGSHELRAVAIIAANDTKIGELV
                     ADALERVGQTGIITVEYGTTVQTLLEVVDGMSFDRGYLSHHMVTDVERMQAVLDQP"
     gene            complement(647..1393)
                     /locus_tag="VHX39_17480"
     CDS             complement(647..1393)
                     /locus_tag="VHX39_17480"
                     /inference="COORDINATES: protein motif:HMM:NF013999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein"
                     /protein_id="HEX3992966.1"
                     /translation="MSTEREAAVRRALDCVTDPELDEPVTDLRFIERLTVDQDGIVSI
                     GFRLPTYWCAANFAFLMADDMRRAVGALPWVRKVRVTLGDHMYADKINHGLEHGLSFQ
                     ATFGDEASAELDDLRRAFLVKAFQRRQESLLRHLITLGHQPAAIVSMTLPQLQALRIG
                     HEGEPLRQRYLDRREVCAGPDITLAFVDAQCNPLSADTLLAYLQGLGRVSINAEFNGA
                     LCRGLLAARFNEDGEPSLYDFARMAPGTAA"
BASE COUNT          274 a          505 c          446 g          282 t
ORIGIN      
        1 ggttggtcca gaacggcctg catccgttcg acatccgtaa ccatgtggtg ggacaggtag
       61 ccccggtcga acgacatgcc gtccaccacc tccagcagcg tctgcaccgt cgtgccgtat
      121 tcgactgtga tgatcccggt ttgtccgacg cgttccagcg cgtccgcaac cagttcgccg
      181 atcttcgtgt cattggccgc aatgatggcg acggcccgca gctcatggct gcccttcagc
      241 ctggtggcag aggcaagcaa ggcagccgaa acctgctcca cggcctgttc caaaccgcgc
      301 accagatcca ccggattggc acccgcatca agcgcggcca ggccttgctg caccatcgca
      361 tccgcgagga tcgtggcagt cgtcgttccg tcaccaacga cctcgttggt cttcatcgag
      421 acttcgcgcg tgacctgcgc acccatgttc tcgaacggat cctcgagttc cacttcggcg
      481 gcgatggtga cgccgtcacg ggagatgatc ggggttccga tcggccggtc gatgatcgcg
      541 ttcatgcccc tgggcccaag cgtcccgcgc accgccttcg ccagttgcgc caccccccgg
      601 ccaagcgctt ggcgggcagc gtcgtcgtgc agcatgatct tcgccattat gcggccgttc
      661 ctggcgccat gcgggcgaaa tcatacaagg acggctcacc atcctcgttg aagcgggcgg
      721 caagcaatcc gcggcacaat gcgccgttga attccgcgtt gatgctgacc cggcccagcc
      781 cctgcaaata cgcaagcaga gtgtcggccg agagcgggtt gcattgtgcg tcgacgaacg
      841 caagagtgat atcgggaccg gcacaaactt cccggcgatc cagatagcgc tgccgaagtg
      901 gctcgccctc gtgcccgatc cgcagggctt gcaactgtgg cagagtcatc gacacgattg
      961 ccgcaggctg atgacccaac gttatcaaat gtcgcagcaa cgattcctgt cgtcgttgga
     1021 acgccttgac caggaaggcg cgacgcagat cgtccagttc cgcgctggcc tcgtcgccga
     1081 acgtagcctg gaaggacagc ccgtgttcca gcccgtggtt gatcttgtcg gcgtacatgt
     1141 gatcgcccaa ggtcacccgg accttgcgca cccacggcaa tgcgccgacc gcgcgccgca
     1201 tgtcatcggc catcaggaag gcgaagttcg ccgcgcacca ataggtcggc agccggaagc
     1261 cgatcgatac gataccatcc tgatcgaccg tcagccgctc gatgaagcgg aggtcggtta
     1321 ccggttcatc gagctccgga tcggtaacgc agtcaagcgc ccggcgaacc gccgcctcgc
     1381 gctcggtgct cacgcagcaa ccctgtcgtg tgagctgccc gcgatcttct gcttctgtgc
     1441 gtcaacatcg atgtcataca ggcgggcggc attcagcccg agaatcttct tcttggcctg
     1501 cagggtc
//
LOCUS       DATAVD010000908         3558 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3063556, whole genome shotgun sequence.
ACCESSION   DATAVD010000908 DATAVD010000000
VERSION     DATAVD010000908.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3558
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3063556"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..493
                     /locus_tag="VHX39_17485"
     CDS             <1..493
                     /locus_tag="VHX39_17485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992967.1"
                     /translation="GAAPLRLNSFPLPIEAWDSGPVDHAARMTALRTWLLAVCGDYNV
                     ALRRGVTQYLDAVETHVAQHGEALAADLTQFDGLYQPRDWCWSALRPLPRAWWQQNGS
                     WAHADLAFWNGNAVVAVQPKETGILPVPFQRFWTGQILPVSPFRRPFPGLSDPASLTP
                     SSP"
     gene            complement(474..1679)
                     /locus_tag="VHX39_17490"
     CDS             complement(474..1679)
                     /locus_tag="VHX39_17490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992968.1"
                     /translation="MAAESHNMRLISRDKIAGFGNIGEGMSMQVTGSGRRILWLAHES
                     APKNFTGVDVSDPAQPRVICQTELPHRNVRSNSLEVCGDIMAVAYQTSTHGLQPAGIE
                     LFDISDPEAPRVIGFFDCSGPSSRGVHQLWFIDGKTVYFSGGAPDFTPRNLLDDQPFR
                     AIDVSDPTKPREICRWWYPGVAEGDTAPPPPRHPRYDTGWRAHNTNVYPERPDRAYLG
                     YIDGGAIILDIGDLSAPKMVGHWNPHPPFPGFTHTAMPLFDRNLLICSDECVRDGGAD
                     WPKLVWVLDARLESNLVCISTLPLPPVEEHQFRGGRYGAHNMHENRPGPAFRSDTLVF
                     GTYFNGGMRVHDITNPFQPKEVAYYVPEGPSADRPAIQVNDVYVDENRLIYTVDRFAG
                     GLYVMEMTV"
     gene            1735..2730
                     /locus_tag="VHX39_17495"
     CDS             1735..2730
                     /locus_tag="VHX39_17495"
                     /inference="COORDINATES: protein motif:HMM:NF014542.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX3992969.1"
                     /translation="MRSDRLNSVPVTVITGFLGSGKTTVLNRLLRAPDLADTAVIINE
                     FGEVSLDHLLIEQAIENAVLLKNGCICCTVRGDILDTLEELFRKRETGELPWFRRIAI
                     ETTGLADPAPVVHTLTDSDQPCHLDGIVVTADAIHVHGQLHDQEEARNQVAFADIILL
                     TKTDLVTPAEADAAESAIRAFNDQAPIRRVVDGDVTPDDVFELGPEKRPDRWLRSAEP
                     HDHDHDHHNHDGIASIVLRARHPISGQALALWLDSLLSLHGADVLRVKGIVRIAGVEQ
                     PLVLQAVHHVLHKLVPLPPQAVTAWAGTGSEIVVIQRGLPESGLRASFAAALTTG"
     gene            2846..3070
                     /locus_tag="VHX39_17500"
     CDS             2846..3070
                     /locus_tag="VHX39_17500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992970.1"
                     /translation="MAFEYKANSGVVRLTKQRQYWAIQFNGRRWGRWASPDAAATAAA
                     RHSTGLSDWDRTPSDVPDDILDWRPLGDSL"
     gene            complement(3075..>3558)
                     /locus_tag="VHX39_17505"
     CDS             complement(3075..>3558)
                     /locus_tag="VHX39_17505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992971.1"
                     /translation="DLDRVWNDRARQLNDRLQATGLPVRVANLSSIWTVCYTVPSRYN
                     WMLQYYLRAEGLALSWVGTGRLVFSLNFTDADFAAVEDRFVAACEAMRDEGWWWTDGT
                     ITNRAIRRQILREMWTHRSFLNARRATGEAIDLELPDADPPVMVAPTASREKVNEELY
                     "
BASE COUNT          660 a         1130 c         1092 g          676 t
ORIGIN      
        1 cggcgcggcc ccgctgcggc tcaattcgtt tccgctgccg atcgaagcct gggactctgg
       61 gccggtggat catgcggcgc ggatgactgc gctacggacg tggttgctcg ccgtctgcgg
      121 cgattacaat gtcgcgcttc ggcgaggcgt cacgcagtat cttgatgctg tcgaaaccca
      181 tgttgcacag catggcgaag ctctggccgc agatctcacg caattcgatg ggctatatca
      241 gccgcgcgac tggtgctggt cggcgcttcg cccgttaccg cgtgcctggt ggcaacaaaa
      301 cggttcgtgg gcacacgccg acctggcgtt ctggaatggc aacgctgtcg tcgcggtgca
      361 accaaaagag accggcatcc tgcctgtccc gttccagcgc ttctggaccg gccagatcct
      421 gccggtcagc ccctttcggc gcccatttcc tgggctttcg gacccggctt cgcttacacc
      481 gtcatctcca tgacatacag cccgccagcg aaacgatcga ccgtgtagat caaccgattc
      541 tcgtcaacat agacatcgtt gacctgaatc gccggtcgat cggccgacgg tccctcgggc
      601 acataatacg caacctcctt cggttggaac gggttggtaa tgtcatgcac gcgcatcccg
      661 ccgttgaaat aggtgccaaa caccaacgtg tccgagcgga acgctgggcc tggccggttc
      721 tcgtgcatgt tgtgcgcgcc atagcggccg ccgcggaact gatgttcctc gaccgggggc
      781 aatggcagcg ttgaaatgca gaccagattg ctctccagcc gcgcgtcgag cacccacacc
      841 agcttgggcc agtcggcacc gccgtcgcgc acgcattcgt cgctgcaaat aagcaggttg
      901 cgatcgaaca acggcatcgc ggtatgggtg aagcccggga atggcggatg cggattccag
      961 tgcccgacca tcttcggcgc actgagatcg ccgatatcga gaatgatcgc cccaccgtcg
     1021 atatagccga gatacgcacg gtcgggacgt tcgggataca cgttggtgtt atgtgcgcgc
     1081 cagccggtgt cgtatctcgg gtgccgcggc ggaggcggcg cggtatcgcc ctcggcgact
     1141 cccggatacc accaacggca gatctcgcgc ggtttggttg gatcgctcac gtcgatggcg
     1201 cggaacggct ggtcgtcgag caggttccgc ggcgtgaaat ccggcgcgcc accagagaag
     1261 tacacggtct tgccgtcgat aaaccacaac tggtgcacgc cgcgcgagct tgggccggag
     1321 cagtcgaaga aaccgatgac gcggggtgcc tccgggtcgg aaatgtcgaa taactcgatc
     1381 ccggccggct gcaatccgtg cgtgctggtc tggtaggcga ccgccatgat atcgccgcag
     1441 acttccagcg agttcgaccg cacattgcgg tgcggcagct cggtctggca aatgacccgc
     1501 ggttgtgccg gatcggaaac atcgacgccg gtaaagttct tcggcgccga ttcatgcgcc
     1561 agccacagaa tgcgccgtcc ggagccggtg acctgcatgc tcatcccctc gccgatgttg
     1621 ccgaatccgg caatcttgtc gcgggatatc agccgcatat tatgggattc cgctgccatg
     1681 acgatcgtgc ctccctgcca tcgttgccca ggactgtgaa ggatttcgcg gccgatgcga
     1741 agtgaccgtc tcaattcggt gccggtgacc gtcatcaccg ggttcctcgg cagtggcaag
     1801 accacggtgc tgaaccggtt gctgcgcgcg ccggaccttg ccgacaccgc ggtgatcatc
     1861 aacgaattcg gtgaggtgag cctggatcac ctgctgatcg aacaagcgat cgagaacgcc
     1921 gtgctgctga aaaacggctg catctgctgc accgtgcgcg gcgacattct cgatacgttg
     1981 gaggaactgt tccgcaagcg ggagaccggt gaactgccgt ggttccgccg tatcgcgatt
     2041 gagaccaccg gcctcgccga cccggcaccg gtggtgcaca cactgactga ctcggatcag
     2101 ccgtgccacc tcgacggcat cgtggtcacg gccgatgcga tccacgtgca tggccaactc
     2161 catgaccagg aggaggctcg caatcaggtc gcattcgccg acattatcct gctgaccaag
     2221 accgacctcg ttacgccggc ggaagcggat gccgcggagt ccgcaatccg ggcattcaat
     2281 gaccaggcgc cgatccgtcg cgtggtcgac ggagatgtga caccggatga cgtgttcgaa
     2341 ctggggccgg agaagcggcc agaccgctgg ctgcgctccg ccgaaccgca cgatcacgac
     2401 cacgatcacc acaaccatga cgggatcgcc tcgatcgtcc tgcgcgccag gcatcccatc
     2461 tccggtcagg cattggcatt gtggcttgat tcgctgctgt cgctgcatgg cgctgacgtg
     2521 ttgcgggtga aaggcattgt gcgcatcgcc ggcgtcgaac aaccgttggt gctgcaggcc
     2581 gtccatcatg tgctgcacaa attggtcccg ctgccacccc aggcggttac ggcatgggct
     2641 ggaaccggca gcgagatcgt ggtgatccag cggggactgc cggaatccgg gctgcgcgcc
     2701 agctttgcgg cggcgctgac caccggttga aaaacgcccc cggtcagacc tggaactgtg
     2761 cgaaatttga cagcttccac gtggatcatg ttagcctggc ggctctatga aaattttgtg
     2821 acgttctgcg cgaacggaat atgtcatggc gtttgaatac aaggccaatt cgggcgtcgt
     2881 ccgcctgacc aaacaacggc agtattgggc aatccagttc aacggtcggc gctggggtcg
     2941 gtgggcttca ccagacgcgg cggccaccgc agcggcccgc cactcaacgg gtctttctga
     3001 ctgggaccgg acaccgtccg acgtgccgga tgacatcctc gattggcggc cactggggga
     3061 ctcgctctag ctcgctaata cagctcctcg ttgactttct ctcggctcgc cgtcggggcc
     3121 accatgaccg gaggatcggc atccggcagc tccagatcga tcgcttcgcc cgtcgcccgc
     3181 ctggcgttga gaaagctgcg gtgtgtccac atttcgcgca atatctgacg tctgatcgcc
     3241 cggttggtga tcgtcccgtc cgtccaccac caaccttcgt cccgcattgc ctcgcacgcc
     3301 gcaacgaaac gatcctcgac cgcggcaaag tcggcatccg tgaagttcag actgaacacc
     3361 agccgcccag taccgaccca actgagcgca agcccttcgg cgcgaagata atattgcagc
     3421 atccagttgt agcgtgacgg caccgtatag cagacggtcc agatcgacga gagattggcc
     3481 accctcaccg gaagcccggt ggcttgcagc cggtcgttca gttgcctcgc gcggtcgttc
     3541 cagacccgat cgagatcc
//
LOCUS       DATAVD010000909         2253 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2134660, whole genome shotgun sequence.
ACCESSION   DATAVD010000909 DATAVD010000000
VERSION     DATAVD010000909.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2134660"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..462)
                     /locus_tag="VHX39_17510"
     CDS             complement(<1..462)
                     /locus_tag="VHX39_17510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3992972.1"
                     /translation="MSRMMTLVAFLQAQNCSNLPGSWRHPSTMLDFLTPEYYQRIARI
                     LEDGKIQMAFFDDRLALPDLYTNNHLEAIGAGVRAVKMDPSTILMAMGMVTQKLGLGT
                     TYSTTYYEPYHVARVFATMDLMLKGRVAWNIVTSLNSAEALNFGRDAHMEHD"
     gene            complement(523..834)
                     /locus_tag="VHX39_17515"
     CDS             complement(523..834)
                     /locus_tag="VHX39_17515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4387 domain-containing protein"
                     /protein_id="HEX3992973.1"
                     /translation="MTLIRDAARVCKSKNAGPFELTIDVVFDDADTFRRVKATGVLCP
                     ALFARLYNVPEQHVLFTPYDAAFAFKATLPRLVPSGDFGDTDVYGCQQHAPLLDIDLP
                     I"
     gene            complement(837..>2253)
                     /locus_tag="VHX39_17520"
     CDS             complement(837..>2253)
                     /locus_tag="VHX39_17520"
                     /inference="COORDINATES: protein motif:HMM:NF018938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HEX3992974.1"
                     /translation="GLWGALGRQKGDRATAMSKEIRLLSTSAILGYGFPEASLQAGLA
                     RNPHMIGVDGGSVDPGPHYLGIGKPFCSPIAIHRDLRLMLHAAIRHGIPLVIGTCGGA
                     GGEPHLQLVADMARQIAREDGLHFRLALIHAEQDKAEIKRRVAKGQVHGLAHQPPLTD
                     AVVDRATRIVGMMGPEPFIEALDAGAQVVLAGRSSDPAPWAAAATRAQLPPAPGWYAG
                     KMLECGATPSIPKGHDSLFVTVREDHVECEPTNPARRCTPLSIANHSLHENSSPIHHI
                     EPGGMLDTSECRFDAISDRAVRISGMSWNPADRYTVKLEGVELAGYRSVCICGTRDPL
                     LIGRLDAFLVSVRQEVATKAAAFGASPDSYQLGIRVYGRDGVMAGREPVRDALPHELG
                     FVIEVVSQQSQDMAGAVLGMARANMLHTDFPGRLCREGNMAFPFSPSDIDVGPVYRFS
                     VFHVAELDDPCELFPIEYEMV"
BASE COUNT          399 a          765 c          693 g          396 t
ORIGIN      
        1 gtcatgttcc atatgcgcat cacggccgaa gttcaaagct tcagcgctgt tcagcgacgt
       61 gacgatgttc cacgccacgc gtcccttcag catcaggtcc atcgtggcaa acacgcgcgc
      121 gacgtggtac ggctcgtagt aggtggtgga atacgtcgtc cccagcccca gcttctgtgt
      181 caccatgccc atggccatca ggatggtgga tgggtccatc ttcaccgcgc gcacccccgc
      241 cccgatcgcc tccagatggt tgttggtgta aagatcgggc agtgccaggc ggtcatcgaa
      301 aaacgccatc tggatcttgc cgtcctccag gatgcgcgca atcctctggt agtattcagg
      361 tgtcaggaag tcgagcattg tggacggatg ccgccacgat cccggcaggt tcgaacagtt
      421 ctgcgcctgg aggaacgcaa ccagggtcat catccgggac atcgtgtttc tcgctttcag
      481 atgggggcgc tttcagatgg acgcgctttc agatggacgc tttcagatcg gcagatcgat
      541 atccagcagc ggcgcatgct gctggcagcc atagacatcg gtatcgccaa aatcccccga
      601 tggcaccagc ctcggaagcg tcgccttgaa cgcaaaggcc gcgtcgtaag gggtgaacag
      661 cacgtgctgt tccggcacgt tgtacaggcg tgcgaacaag gccggacaca acacgccggt
      721 ggccttgacg cggcgaaacg tgtcggcgtc gtcgaacacg acatcgatcg tcagctcgaa
      781 cggtccggca ttcttgctct tgcagacgcg ggccgcgtcg cggatcaggg tcatcgctac
      841 accatctcgt attcgatcgg gaacagttcg cacggatcgt ccagctccgc cacgtggaac
      901 acgctgaacc gatacaccgg tccgacatca atatcggacg gcgagaacgg aaatgccatg
      961 ttgccctcgc ggcacaaccg gccggggaaa tcggtgtgca gcatgttggc gcgcgccatc
     1021 cccagcacgg cgccggccat gtcctggctc tgctgcgaga ccacttcgat cacgaagcca
     1081 agttcatgcg gcaacgcgtc ccgcaccggc tcgcgtccag ccatcacgcc gtcacggccg
     1141 taaacgcgga tgcccagttg gtagctgtcg ggcgaggcac cgaaggccgc cgccttcgtc
     1201 gcgacctcct gacgcacact gaccaggaac gcatccagcc gtccgatcaa cagcgggtcg
     1261 cgcgtgccgc agatgcagac ggaccgatag cccgccagtt ccaccccctc cagcttcacc
     1321 gtatagcggt ccgccggatt ccagctcatg ccggaaatcc gcaccgcccg atcgctgatc
     1381 gcatcgaacc ggcattccga cgtgtccagc attccgccgg gttcgatgtg gtggatcggg
     1441 ctgctgttct cgtgcaacga gtggttggcg atggacagcg gcgtgcagcg gcgcgccgga
     1501 ttggtcggct cgcactccac atggtcttcc cgcaccgtca cgaacaggct gtcgtggcct
     1561 ttggggatcg acggcgtggc gccgcactcc agcatcttcc cggcatacca gcccggagcg
     1621 ggcggcagtt gcgcgcgcgt cgccgccgcg gcccagggag cgggatcgct gctgcgcccg
     1681 gccagcacga cctgcgcgcc ggcgtccagc gcctcgatga acggttcggg tcccatcatg
     1741 ccgacgatgc gagtcgcccg atccaccacc gcatcggtca gcggcggctg atgcgccaga
     1801 ccgtgcacct gaccctttgc cacccgccgt ttgatctccg ccttgtcctg ttcggcgtgg
     1861 atcagggcca gcctgaaatg cagcccgtcc tcgcgggcga tctgacgagc catgtcggca
     1921 acgagttgca gatgcggctc gccgcccgcc ccgccgcagg tgccgatgac cagcgggatg
     1981 ccgtgccgga tcgccgcgtg cagcatcagc cgcaggtccc ggtggatcgc gatcggcgag
     2041 cagaacggct tgccgatccc gaggtaatgc ggccccggat cgacgctgcc gccgtccacg
     2101 ccaatcatgt gcgggttgcg cgccagcccg gcctgcagcg acgcctccgg gaagccgtag
     2161 cccaggatgg cgctggtcga cagcaggcga atctccttgc tcatagctgt tgcccgatct
     2221 cccttctgcc ggcccaatgc accccataag ccg
//
LOCUS       DATAVD010000910         3602 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3063773, whole genome shotgun sequence.
ACCESSION   DATAVD010000910 DATAVD010000000
VERSION     DATAVD010000910.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3602
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3063773"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1003)
                     /locus_tag="VHX39_17525"
     CDS             complement(<1..1003)
                     /locus_tag="VHX39_17525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992975.1"
                     /translation="MSIILNKNAFVDPTSTAIGLSQMFTVTAGSNNPTYLVLTVLDRN
                     EYTAGASGATGTLTGNGHTLSLSSLGGDGRGAGIVFTYQASTGRYYNSTYGYSDQLTY
                     QSSGSRNDVTNLSLFGTNSLTQATAYASSAYSMMQVDASGYLGSATVVTQPKSSGIVP
                     AQATPDSIAAMADGFVGQAWNMDGCWVLASTVAADAGTSLPVQSTAIGLPGVANGEWI
                     VAFNGPAGQSGNWQSLVQEGEIVVIGTPGGGGHITTCVSGSGATAMLVDNATFESVNG
                     QITNPANDGSTSDIIIQAPHLASQEWAGVAASSVVIYELDTPIVADTTGSCSIAFHAT
                     "
     gene            1391..3235
                     /locus_tag="VHX39_17530"
     CDS             1391..3235
                     /locus_tag="VHX39_17530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEX3992976.1"
                     /translation="MALTALGVVFGDIGTSPLYAFSIALNATGHTPPTPADVKGIVSL
                     IFWALMVMVSVKYVELVLRADNDGEGGILALLSLVEGSRRMAGLRITFAMLLGIVGAS
                     LLYGDGVITPAISVLSAMEGLKLAAPGFQSFILPVTLAILVALFAIQHQGTHRIGSLF
                     GPIMVVWFLAIGLLGAVNIPLAPEIVGALNPLAAVPVLTGNPAVAAAVFGAIFLALTG
                     GEALYADMGHVGAPAIRLAWFGLVVPALVLNYLGQGAMLLAHPEAADSPFYKLAPPWA
                     LVPFIALAAAATVIASQALISGVFSLTRQAMQLGFCPRVNIVPTSSDEAGQIYVPTAN
                     WLLMVGTLLIVVMFKTSDNLGSAYGVAVSGTMLATTVLLYFMVTRRWHWPTIAAVPLI
                     VVFGTVDCGFLAANSLKIVEGGWFPLTVGGAVAFLMWCWRRGTSELRRRLHELSMPVG
                     TFLAHVDEKVIGRAAGTAVWITKVDHGISPMILHHVRHNAVLHDTVVLMTVTPDRRPR
                     VPFRDRHTLLRLGHGFFHITVRLGFMQRPDIPLTLKNCEILGFDADLEDVHYFVGHET
                     VIRRPHGSTMGPVTFALFAFLTRIASRAPDFFRIPQDRLSEVGFRVEL"
     gene            complement(3295..>3602)
                     /locus_tag="VHX39_17535"
     CDS             complement(3295..>3602)
                     /locus_tag="VHX39_17535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="glucans biosynthesis glucosyltransferase MdoH"
                     /protein_id="HEX3992977.1"
                     /translation="LAKTIATMRIALGFRAAWTPQNRSARGVTWSEAAQLLWPQIVLG
                     CTVFVCFAHAGWPAVLWATPFASGLVVAMPFCVFSAHPAVGKWMREKRLAAIPEELN"
BASE COUNT          631 a         1091 c         1092 g          788 t
ORIGIN      
        1 atgtggcatg gaatgcaata ctgcacgatc ctgtcgtgtc agccacaatc ggtgtgtcca
       61 gttcgtaaat caccaccgac gaggctgcga cacctgccca ttcctgcgaa gcgaggtgtg
      121 gtgcctggat gatgatatcg ctcgttgaac cgtcattcgc cgggttcgtg atctgaccgt
      181 tgacactttc aaacgtggcg ttgtccacca acatcgcggt agcaccggag ccggacacgc
      241 aggtcgtgat gtgaccacct ccgcccggcg tgccgatgac gacgatctct ccctcctgca
      301 ccaaggattg ccagttgcct gactggccgg ccggaccgtt aaaggcgacg atccattcgc
      361 cgttcgccac accaggcagg ccaattgccg tgctctgcac tggcagcgaa gttcccgcgt
      421 cagcggcaac tgtgctcgcc aatacccagc aaccatccat attccaggcc tgaccaacaa
      481 acccgtctgc catggccgca atggaatccg gtgttgcctg ggctggcaca attccgctgg
      541 actttggctg cgtaacgacc gtggcgctgc ccaaatagcc tgaggcatcg acctgcatca
      601 tactgtaggc gctcgaggcg taggccgttg cctgggtcag gctgttggtg ccgaacagcg
      661 acagattggt cacgtcattc cggctgccgg acgactggta ggtcagttga tcggagtatc
      721 cataagtact gttgtagtat cgcccagtgg acgcttgata tgtgaagaca ataccggctc
      781 ctcgcccgtc gccgccaagg ctgctgaggc tcaatgtatg gccgttgccg gtcagcgtgc
      841 cggtcgcacc gctggctccg gcagtatatt cgttccggtc gagcacggtc agcacgagat
      901 aggtcggatt gttgcttccc gcggtaaccg taaacatctg cgacaggccg atcgccgtcg
      961 aggtgggatc gacgaacgca ttcttgttca ggatgatcga catcgttgac ctcgcaagcg
     1021 cagcgaacgg gcgtacaaaa gcagacgtgc ttcggacacg cgttcaccga ctcaggactg
     1081 atcgttaaag ggctggtctg aatttgcacg attgtgtgcg gcggctcggc tcaactgtgg
     1141 cgaaccatac cgcggacagc ttaacgaacc gttaagcgaa cggatcggaa acacatgatt
     1201 ccaccgaatc ggcggtctcg atctccgctt gcgctggccc gattcttgcg ttcgcccgtg
     1261 acagactgcg aaccctgcag gaggttcaga gatccgccga cccgcgacca caccatcgag
     1321 ccaccgggca gagacgagcc gggcgcatgc cgccctgtcc gggccgcatc acgccggcag
     1381 tattggtttt ctggctttaa ccgcacttgg cgtggtgttc ggcgatatcg gcaccagtcc
     1441 gctgtacgcc ttttcgatcg cgctcaatgc caccggccac acgccgccca caccagctga
     1501 cgtcaagggc atcgtttcgc tcattttctg ggcgctcatg gtgatggtat cggtcaaata
     1561 cgtggaactg gtgctgcgtg ccgacaatga cggtgaaggc ggcatcctgg cgctattgtc
     1621 tctggtcgag ggcagccggc ggatggccgg cctccgcatc accttcgcca tgttattggg
     1681 tattgtcggc gcgtcgctgc tttacggcga cggagtgatt acgcccgcaa tttccgtgct
     1741 ctcggccatg gaggggttga aacttgcggc ccccggcttc cagtccttca ttctgccggt
     1801 gaccttggcg attttggtcg ccttgtttgc catccagcac cagggtacgc atcgcattgg
     1861 cagtctgttt ggcccgatca tggtcgtatg gttcctggcg atcgggctgc tcggggcggt
     1921 caatattcca ctcgcgccgg agattgtcgg cgcgctcaat ccgctcgcag cggtgccggt
     1981 cctgaccggg aatccggccg tcgcggcggc agtgttcggc gccattttcc tggcgctgac
     2041 tggcggtgag gcgctctatg ccgacatggg tcatgtcggc gccccggcaa tccggctggc
     2101 atggtttggc ctcgtggtcc cggcgctggt gttgaactac ctgggtcagg gggcaatgtt
     2161 gctggcgcat ccggaggcgg ccgatagccc gttttataag ctggcgccgc catgggcgtt
     2221 ggtcccgttc attgctctcg ctgcggcggc gacggtgatt gcatcgcagg cgctgatctc
     2281 aggggtgttc tcactgaccc gccaggcgat gcagttgggc ttttgccccc gggtcaacat
     2341 tgtaccgaca tccagtgacg aggccggcca gatttacgtg ccgaccgcca actggttgtt
     2401 gatggtcggc accttgctga tcgttgtcat gttcaaaacc tcggacaatc tgggttcggc
     2461 ttatggtgtc gctgtgtcag gtaccatgct ggcaaccacc gtgctgcttt atttcatggt
     2521 cacacggcgc tggcattggc caaccatcgc cgcggtgccg ttgatcgttg tgttcggcac
     2581 ggtggactgt ggcttcctcg ccgccaattc gctgaagatc gtcgaaggcg gctggtttcc
     2641 gctgacagtt gggggcgccg tcgcgttcct gatgtggtgc tggcgacgcg gcacgtccga
     2701 gctgcggcgc cgcctgcatg agttgtcgat gccggttggc actttcctcg cacacgtcga
     2761 tgagaaggtg attggccggg ccgccggaac ggcggtgtgg atcaccaagg tggatcacgg
     2821 gatatcgccg atgatactgc atcatgtccg gcataatgca gtgctgcacg atactgtcgt
     2881 gttgatgaca gttacacccg atcgccggcc gcgcgtgccg tttcgtgacc gtcacacatt
     2941 gctgcggctc ggtcatggat tctttcacat cactgtcagg cttggattca tgcagcggcc
     3001 tgacatcccg ctgactttga agaattgcga aattcttggc tttgacgccg atcttgagga
     3061 cgtccattat ttcgtcggcc acgagacggt gatccgccgg ccgcacggct cgaccatggg
     3121 accggtcacg ttcgcgcttt ttgccttcct gacacgaatc gccagccgcg cgcccgattt
     3181 tttccgtatc ccacaggatc ggctgtcgga ggtcgggttt cgggtcgaac tctgacgccg
     3241 gctgcccggc atcagccggc aaaacgaatg acttgcgcgg taatcatcct gcaatcaatt
     3301 tagttcttcc gggatcgctg ccaatcgctt ttcccgcatc catttgccaa ccgccgggtg
     3361 ggccgaaaac acacagaatg gcatcgccac aaccaaaccg ctcgcgaatg gcgttgccca
     3421 caacaccgcc ggccatcccg catgcgcgaa acaaacaaag accgtgcagc ccaatacgat
     3481 ttggggccac agcaactggg ccgcctcgga ccaggtgacg ccgcgggcgg agcgattctg
     3541 cggcgtccag gctgcgcgga agccgagcgc gatccgcatc gtggcaattg tcttggccag
     3601 ga
//
LOCUS       DATAVD010000911         7128 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_459501, whole genome shotgun sequence.
ACCESSION   DATAVD010000911 DATAVD010000000
VERSION     DATAVD010000911.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7128
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_459501"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1012
                     /locus_tag="VHX39_17540"
     CDS             <1..1012
                     /locus_tag="VHX39_17540"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3992978.1"
                     /translation="EGTVLAETTVRTSTDVYFRERTPWRIGTVAMDCGPFFVAHLHGD
                     VVEGGRVRMTLRLDKSGNAVAIAMPDRPTEHQEDDVQLRELTCDPKFRRVLVTDGRNA
                     TGQAMARAMATAGATLIFVGIADPWKPFPGEAGLRAIPGVEIVSLDITDSQSVADVAG
                     EIAHRVDILVNTAEHPRGGGIMHRHGLTVAQQEMDIRYFGLLRLAQQFGPTMRARGAD
                     GVNTAAAFVNLLSVHALMNWPQYGAFSAAEAACLSAAQALRAELRGGGVKVLNMFAGP
                     LDTEWFQSVPPPKLSPDALANATVEALRKGIEDSYVGDIAQDIKARLDAQPKAVEREL
                     GA"
     gene            1009..1788
                     /locus_tag="VHX39_17545"
     CDS             1009..1788
                     /locus_tag="VHX39_17545"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEX3992979.1"
                     /translation="MSALAAFAAALASGSIRVVDLTHTLAPEFPTIVMPPELGQCAPF
                     RMEEVSRYDERGPAWYWNNFSMGEHTGTHFDAPIHWVTGKELPNNAVDTIPPAHFVAP
                     ACVIDCSAESAADADFVLTVPFVEAWEARHGRIPAKSWVLLRTDWHKLTPKQYVNLLD
                     DGPHSPGPAPAVVKWLVEERDVHGFGTETIGTDAGQAAHFTPPYPAHHYMHGRGRYGL
                     QCLANLDQLPPTGALLLTAPLKIRQGSGSPLRVLALIETKS"
     gene            1785..2501
                     /locus_tag="VHX39_17550"
     CDS             1785..2501
                     /locus_tag="VHX39_17550"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3992980.1"
                     /translation="MTIAVVTGGSTGIGAAICSHMLDAGYHVVSLSRREPADPRCEHV
                     EVDLLDPVATEQAAQDIVARHEITHVVHNAGVIRAKLLADVTLDDMMALGQLHLNAVL
                     TLAQAALPSMRAAGFGRIVLISSRAALGLATRTAYSATKAGMIGMARTWALELAPDGI
                     TVNVVAPGPIRETEMFHDVVPADSAREEALAAAIPVKRLGVPDDVARAVMFFADPASS
                     FITGQTLFVCGGSSIGSITI"
     gene            2514..3287
                     /locus_tag="VHX39_17555"
     CDS             2514..3287
                     /locus_tag="VHX39_17555"
                     /inference="COORDINATES: protein motif:HMM:NF013353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HEX3992981.1"
                     /translation="MRIWYQSYVDYENGAEYWDHLKAHLARIVDPGTEIEVHGITPHD
                     SYAHPIVEFRCARETICNAIKAEREGYDAFVIGHFQDAGLYECRSVVDIPVVALGEAS
                     MLHACQLGQRSGIVTINPRYISWFHHQIRKYGLEHRVAGVHAMTFEPGEILKAYQSDE
                     LAKDVERKFAEQGRPLVAQGVDVLIPGGGIPMLLFSRILGHAVDGAPVINGIPIVVKA
                     AETAVKLRRLTGLSVSRTSDYVKAPPHVIEEFLTHPKGL"
     gene            3290..4942
                     /gene="ggt"
                     /locus_tag="VHX39_17560"
     CDS             3290..4942
                     /gene="ggt"
                     /locus_tag="VHX39_17560"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX3992982.1"
                     /translation="MTEKHSASGKRGMVITNHPLASAAGAEILAAGGNAIDAAIAAFF
                     TLTVVEPMMVGMLGGGMAHIRLADGTHTVIDNQSTAPGATGPMTYTPDPDAAPGTMDT
                     IGRKNQVGPTAVAVPGNLKGWCEALDRFGTFSRADVMEPAIRHAGRGFRVTPYLHDCI
                     GDAAADMTLDPEIARLYLPNGTPLAVGARLVTRDYAQTLTDIARHGPDHLYTGPLGAH
                     YASHMAHAGGYITRADLTGYKTITREPVRGTYRGFEIIGPPPPSSGPLHIVQMLNILE
                     GYDLQKMGFGTRETVHLLAEVLKIAFADRAAATADPAFVRVPMEKILSKSYAADRRSR
                     IDPRRAQAWSAEVAPEASAYTTHVTVADAAGNIVASTQTINSLFGARYIVPGTGMIPN
                     NYMHVFDPHPNRASSVAPGKRVTSSMSPVIVTKDGKPIYAMGLPGGLRIFPSVMQALC
                     NLIDHGMTVQEAVEAPRVWTQGHALELEGGIAQPVFEALRDKGHDVVRMPTVAGGMSA
                     IHFHDDGTMEGAACWRADGTPIAVGGGLARPGVRFRPEAIRH"
     gene            complement(5323..6828)
                     /locus_tag="VHX39_17565"
     CDS             complement(5323..6828)
                     /locus_tag="VHX39_17565"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MDR family MFS transporter"
                     /protein_id="HEX3992983.1"
                     /translation="MPDAPGESLSRTQPNVPEQPDEARRRLVLAACLIATFMAAVEST
                     IVATIIPTIVSDLGGFNLFTWVFTVYLLTQAVAIPVYGRLADLYGRKPVFFAGTALFL
                     VGTILCGSAWSMLSLVLFRAVQGCGAGAIQPIAATILGDIYTPAERGRIQGLVSSVFG
                     VSAVIGPSLGAFLVAHVSWRVVFWVNVPIGFAAIAMIAVFLRESVQHRRHSIDWAGSL
                     LLLLAFGSLMLALVQSGALSGPTLAALTATGVIALVTLYFHERSTPEPMLPLELWRIR
                     VIIVGSLGNFTSGAMMMGVSAFLPTYVQGAMGRGAIDGGLVLGAMSVTWALASIAAGR
                     LMVRTSYRLVAIIGGLSLSTGCAMLVALRPADGPLWASAGSLVIGIGMGCCSTTFIVS
                     IQASVPWGQRGAATSSSMFMRFVGQSVGASSCGAVLNLSMRHLDPGAVNAVAQLLDLP
                     TRRTMAPERLAHLTDVMAGSLHNAYLLATGFAVLTLVLACQLPARLSPTRH"
     gene            complement(6912..>7128)
                     /locus_tag="VHX39_17570"
     CDS             complement(6912..>7128)
                     /locus_tag="VHX39_17570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase"
                     /protein_id="HEX3992984.1"
                     /translation="MVQADWVQPGATVIDVGINRLPDGRLVGDVAYDACAAVAGAITP
                     VPGGVGPMTVACLLENTLTAALRRRRA"
BASE COUNT         1299 a         2232 c         2322 g         1275 t
ORIGIN      
        1 ggagggcacg gtgctggccg aaacgacggt ccggactagc accgatgtct atttccgcga
       61 gcgtacgcct tggcgcattg gcaccgtcgc gatggattgt ggtccgttct tcgttgcaca
      121 tctgcatggt gacgtggtgg agggtggccg cgtacggatg actttgcggc tggataaaag
      181 cggcaatgcg gtcgccattg ccatgccgga caggccgacc gaacatcagg aggatgacgt
      241 gcagttgcgc gagctgacct gcgatccgaa attccgccgg gtcctggtca cggatggccg
      301 caatgccact ggtcaggcga tggctcgtgc gatggcgacg gcgggtgcga cgcttatttt
      361 tgtcggtatc gccgatccgt ggaagccgtt tccaggtgaa gccggtttgc gtgccattcc
      421 tggtgtggaa atcgtttcgc tcgatatcac tgatagtcag tctgtcgccg acgtggcggg
      481 cgagatcgcc catcgggtcg atatcctggt caataccgcg gaacatcctc gcggcggcgg
      541 catcatgcac cgtcatggcc tgaccgttgc gcaacaggaa atggatatac gatactttgg
      601 cctgctgcgg ctggcgcaac agttcggacc caccatgcgt gcgaggggag ccgacggtgt
      661 caacaccgcg gcggctttcg tcaacctgct gtctgtccat gcgctgatga actggccgca
      721 gtatggtgca ttctccgccg ccgaggctgc ctgcctgtcc gctgcccagg cgctacgggc
      781 ggaattgcgc ggtggtggcg tgaaggtgct gaacatgttc gccgggccgc tcgacacgga
      841 atggtttcaa tcggttccac cgccaaaatt gtcgcctgac gccctggcga acgcgacggt
      901 ggaagcgctg cggaaaggca tcgaggattc ctatgtcggt gacatcgcgc aggacatcaa
      961 ggctcggttg gatgcccaac ccaaagccgt ggaacgggag cttggcgcat gagtgccctt
     1021 gccgcctttg ccgccgcgct ggcgtccgga tcgatccggg tggtggattt gacgcacact
     1081 ctggcgcctg aatttcccac gatcgtcatg ccgccggaac taggtcagtg cgctccgttc
     1141 cgcatggaag aggtgtcgcg ttacgacgag cgcgggcctg cctggtactg gaacaatttc
     1201 tccatgggtg agcacacggg cacccatttc gatgcgccga tccactgggt taccggcaag
     1261 gaactgccga acaatgcggt ggacaccatt ccgcccgcgc atttcgtggc gccggcctgc
     1321 gttattgatt gctccgccga atccgctgct gatgcggact ttgtgctgac cgtgccgttc
     1381 gtggaggcct gggaagcgcg acacggccgg attcccgcga agtcctgggt tctgctgcgg
     1441 acggactggc acaagttgac tccgaaacaa tatgtcaatt tgctggatga cgggccgcat
     1501 tcacctggtc ccgcacccgc tgtggtgaag tggctggtcg aggaacgtga cgtgcatggc
     1561 ttcggtaccg aaaccatcgg caccgatgcc ggccaggccg cgcattttac accaccttat
     1621 ccggcgcacc actacatgca cgggcggggc cgttatgggc tgcaatgtct tgccaatctg
     1681 gatcaattgc cgcctaccgg cgccctgttg ctgaccgcgc cgctgaaaat ccgccaagga
     1741 tccggcagtc cgttgcgcgt gctggcgctg atcgagacga aatcatgacc atcgcggtcg
     1801 ttacgggtgg cagcaccggt attggcgccg ccatttgcag ccatatgctg gatgcgggct
     1861 atcatgtcgt ttcactgtct cggcgggagc ccgctgatcc gcgctgtgag catgtcgaag
     1921 tcgacttgct cgatccggtg gcaaccgaac aggcggcgca ggacatcgtg gcgcgtcatg
     1981 agatcactca tgtggttcac aatgccggtg tcatccgcgc gaagctgttg gcggacgtta
     2041 cgctcgacga tatgatggcg ttgggtcaac tgcatctgaa cgccgtgctg accttggccc
     2101 aggcggcact gccgtccatg cgggccgccg gcttcggacg aattgttctg atatcatccc
     2161 gagcggcttt ggggctggcg acacggacgg cgtattcggc aacgaaagcg ggcatgatcg
     2221 gaatggcccg cacgtgggcg ctggaactgg cgcccgatgg catcaccgtc aacgtcgtgg
     2281 cgcccgggcc gatccgcgaa acggaaatgt tccatgacgt ggttccggcc gacagcgctc
     2341 gggaagaagc gctcgccgcc gccatccccg tcaagcgtct cggcgtgcca gacgacgtcg
     2401 ctcgggctgt tatgtttttc gctgatccag ccagcagttt tatcaccggg cagacattgt
     2461 tcgtctgcgg cgggtccagc atcggatcga tcacgatcta acgaggaaac cccatgcgca
     2521 tctggtacca aagctatgtc gactacgaaa acggcgccga gtattgggat catttgaaag
     2581 cccatcttgc ccgcatcgtc gatcccggca ctgaaatcga ggttcatggc atcacgccgc
     2641 acgattcgta cgctcatccc atcgtcgaat tccgctgcgc gcgggaaacg atctgcaatg
     2701 cgatcaaagc cgaacgggag gggtacgatg cgtttgtgat cggacacttt caggatgcgg
     2761 ggctgtacga gtgccgttcc gtcgtcgaca tcccggtcgt cgcgttgggt gaggcgtcga
     2821 tgctgcatgc gtgccagctt ggacagcgat cggggatcgt gacgatcaat ccgcgctata
     2881 tctcgtggtt ccatcatcaa attcgcaaat atgggctgga gcaccgcgtc gccggtgtcc
     2941 atgcgatgac cttcgagccg ggggaaatcc tgaaggccta ccaaagcgac gagcttgcca
     3001 aggacgtcga gcggaaattc gccgagcagg gcaggcctct ggtcgctcag ggcgttgatg
     3061 tcctgatccc gggcggcgga attccgatgc tgttgttttc ccgcattctt ggccacgcgg
     3121 tggatggcgc cccggtcatc aacggcattc ccatcgtggt gaaagccgcc gaaaccgcgg
     3181 ttaagctgcg tcgtctgacg gggctgagcg tcagccgcac ctccgactac gtgaaggcgc
     3241 cgccgcacgt gatcgaggag ttcctgaccc accccaaggg gctgtgagca tgaccgaaaa
     3301 gcattcggcc agcggcaagc gtggcatggt gatcaccaac catccgctgg cttccgccgc
     3361 cggggcggaa atactcgccg ccggcggtaa cgcaatcgat gccgccattg ccgcgttctt
     3421 caccctgacg gtggtggaac cgatgatggt gggcatgctg ggtgggggca tggcgcatat
     3481 ccgccttgcc gatggcaccc acaccgtcat cgacaaccag agcaccgcgc cgggtgccac
     3541 cggacccatg acctatacgc cggatcccga cgccgccccc ggaacgatgg acacgatcgg
     3601 ccgcaaaaac caggttggtc ccactgctgt cgctgtcccc ggcaatctga aaggctggtg
     3661 cgaggcactg gatcgtttcg gcaccttctc ccgtgccgac gtcatggaac ctgccatccg
     3721 ccatgccggc cggggcttcc gcgtcacccc ctatctacac gactgtatcg gcgatgccgc
     3781 cgcggacatg acgctcgatc cggaaatcgc ccggctgtat ctgccgaacg ggacgcccct
     3841 ggcagtcggt gcccgcctgg tcacccgcga ctatgctcaa acgctgaccg acatcgcccg
     3901 gcacggcccc gaccacctct acactggccc gcttggtgcg cattacgcca gccacatggc
     3961 tcacgccggc ggctatatca cgcgtgcgga cttgaccggc tacaagacga ttacccgcga
     4021 accggtgcgt ggaacctatc gcggcttcga gatcatcggg ccaccgccgc cctcgtccgg
     4081 cccgctgcac attgtccaga tgctcaatat cctggaaggc tacgatctcc agaagatggg
     4141 gttcggcact agggaaaccg tccatctgct ggcggaggtg ctgaaaatcg cctttgccga
     4201 ccgtgccgcc gcgaccgccg acccggcttt cgttcgtgtc ccgatggaaa aaatcctgtc
     4261 caaatcctat gcggcggatc gccgttcccg tatcgacccg cgccgtgccc aggcgtggtc
     4321 ggccgaggtg gcgccggaag catccgccta taccacccat gtcacggtgg cggatgccgc
     4381 cggtaatatc gttgccagca cgcagaccat caacagcctg ttcggcgccc gctatatcgt
     4441 tccgggcacc ggcatgatcc ccaacaacta catgcatgta ttcgatccgc atccaaaccg
     4501 agcaagttcg gttgcgccgg ggaaacgggt gacgtcatcg atgtcgccgg tcatcgtaac
     4561 gaaagatgga aagcccatct atgccatggg cctgcctggc gggctgcgta ttttcccgtc
     4621 ggtgatgcag gcgctgtgca acctgatcga ccacgggatg accgtgcagg aagccgtcga
     4681 ggcgccccgg gtctggaccc agggccacgc gctggaactg gagggcggca tcgcccaacc
     4741 ggtgttcgaa gccttgcggg acaaaggtca tgacgtggtt cgcatgccta cggtcgcggg
     4801 cggcatgagt gcgatccatt tccatgatga cggcaccatg gaaggtgcgg cctgctggcg
     4861 tgccgacggg acacccatcg cggttggcgg cggcctggcg cgacccggcg tgcggttccg
     4921 gccggaggcg atacggcact gacttcgggt cgcttctacg tcagggtccg tggatagata
     4981 ataccaatcg cccttgatgt tgacccagcg gcagcgccgt gcatccgtct tggcaagcgc
     5041 atgctcgccg tcgatgcctt tgtttccgct cgtaaaaggc ttggataccg gcatgcgccg
     5101 gcatgacgga cggggtcaac cgaagagtct gcatcaacgc cggttggtat aagtgctgcg
     5161 acgttggtac tgccgcctgt tccgtcatag cgggcggagg cccgctatcc acgccttctc
     5221 cgagatcagc actgcaagcc gtggatggcg accctttgcc cgccatgacg atgagaggct
     5281 ggcggcgctt gtcaaacgat ttggttattt caccacgagc tctcagtgcc gcgtggggct
     5341 caggcgcgcc ggcaactggc aggcgagcac caaggtcagc acggcaaatc cggtcgccag
     5401 cagataagcg ttgtgcagcg acccggccat cacgtccgtc agatgggcaa gtctctcagg
     5461 tgccatggtt cggcgggtgg gcagatccag caattgcgcc acggcattga ccgcgccggg
     5521 gtcgaggtgc cgcatgctga ggttcagcac cgcgccacag ctcgatgcgc ccacggactg
     5581 gccgacgaag cgcatgaaca tcgatgatga ggtcgccgcg ccacgctggc cccaaggcac
     5641 cgaggcctgg atcgagacga taaacgtcgt gctgcagcag cccatcccga tgccgatcac
     5701 cagcgacccg gccgaggccc atagcgggcc atcggcggga cgcaacgcca ccagcatggc
     5761 gcagccggtc gacagcgaca ggccgccaat gatcgcgacc agccgatagc tggtgcgcac
     5821 catcaaccga ccggcggcga tgcttgccag cgcccaggtt accgacatcg cacccaggac
     5881 caggccgcca tcaatggcgc cccttcccat cgcgccctgc acataggtcg gcaggaatgc
     5941 ggagacgccc atcatcatgg cgcccgaggt gaagttgccc aggctgccga cgatgatgac
     6001 gcggatgcgc cacaactcca gcggcagcat cggttcgggg gtgctgcgct cgtggaaata
     6061 cagcgtgacc agggcgatga ctccggtcgc ggtcagggca gccagcgtag gcccgctgag
     6121 agcgccgctt tgcaccaggg ccagcatcag gctgccgaag gcgagcagca gcaacagcga
     6181 gccggcccag tcgatgctgt ggcggcgatg ctgcacactc tcccgcagga agacggcgat
     6241 catggcgatg gcggcgaagc cgatggggac gttgacccag aagacgaccc gccaactgac
     6301 atgggcgacg aggaaggcgc cgagcgaggg cccgatcacc gccgagacgc cgaacaccga
     6361 ggagaccagc ccctggatgc ggccgcgttc ggcgggggtg tagatgtcac ccaggatggt
     6421 cgcggcgatc ggctggatcg cgccggcgcc gcagccttgc acggcccgga acagcaccag
     6481 cgacagcatg ctccaggcgg acccgcagag aatggtaccg acaaggaaca aggcggtgcc
     6541 ggcgaagaac accggtttgc ggccgtagag gtcggcgagg cggccataga ccgggatggc
     6601 gacggcctgg gtcagcaagt agacggtgaa tacccaggtg aacaggttga agccgcccag
     6661 gtcgctgacg atcgtcggga tgatggtggc gacgatggtg ctctcgaccg cggccatgaa
     6721 cgtggcgatc aggcaagcgg caaggaccag gcggcggcgc gcctcatccg gctgttccgg
     6781 cacgttgggt tgcgtacggc tcaggctttc gcccggggcg tccggcattc gttgtttcct
     6841 cccgcgcacc gcgcttgcga cgttgtctca tcgccggggc ggcgtgacaa cgtcggcggg
     6901 cgaaggggcg gctatgcgcg gcggcggcgc aaggcggcgg tcagggtgtt ttccagcagg
     6961 caggcgacgg tcatcggccc gacgccaccg ggcacggggg tgatcgcgcc ggcgacggcg
     7021 gcgcaggcgt cgtaagccac atcgccgacc aggcgaccgt ccggcaggcg gttgatgccg
     7081 acatcgatca ccgtggcgcc gggctgcacc cagtcggcct gcaccatc
//
LOCUS       DATAVD010000912         1510 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3625786, whole genome shotgun sequence.
ACCESSION   DATAVD010000912 DATAVD010000000
VERSION     DATAVD010000912.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3625786"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="VHX39_17575"
     CDS             <1..264
                     /locus_tag="VHX39_17575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992985.1"
                     /translation="PIYDELGPYARTWMADGDVLPFGEVDCARVVNSVRDAMSGGDLP
                     NWADQLLGRALGRVVAHELVHMLTRSVRHGRDGVTRHRCRAAS"
     gene            716..>1510
                     /locus_tag="VHX39_17580"
     CDS             716..>1510
                     /locus_tag="VHX39_17580"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEX3992986.1"
                     /translation="MILLSNAILRQLALAVVVLTTPELTLAQAPSGVIEGQITDASGA
                     AIPGAAVIITGSSGSTRTSAADKEGRYRIDGLPPASYTVRIQSPGFALFTSAAIGVGS
                     QVQTVNARLDIQTARANVTVADSASQVGVDPSQNLGQIVLRGDDLDAFADDPEDLTNE
                     LQMLAGPAVGPNAGQIFVDGFTGGIMPPKASIREIRVNQNPFAAEYDRVGFGRVEVFT
                     KPGSDMYHGQASFDFGNRALTARNPYLTGPIVPNYRQEIFAGNFAGP"
BASE COUNT          302 a          442 c          453 g          313 t
ORIGIN      
        1 cccatctatg acgaactggg tccttatgcc agaacgtgga tggcggatgg cgacgttctg
       61 ccgtttggcg aggtcgattg tgcaagggtg gtaaattccg tacgcgacgc gatgagcggc
      121 ggcgacctgc ccaactgggc cgatcagtta ctgggccggg cgctcggccg cgtggtggcg
      181 cacgagctgg ttcacatgtt gacgcggtcc gtccggcacg gaagggacgg cgttacgagg
      241 catcgctgtc gggccgccag ttgatcagtg gatcgttgcg gttggagaaa aacgatgttc
      301 tgcgcctgcg agagcggaag atcgggccac ggccgtccgc gatgccatga gcactttcat
      361 tgaggcgccg gcggtaattc gagtccgacc gttcgccccg gaaagcccgc ggcgtcgaaa
      421 taggcagtcc caccgatccg ttgcacattg agaattgtcg ccattccgtt tgcggcgggt
      481 gtggctgcga atcgtctcct gctcccattt cacgagctct ccccctttga gactctctcc
      541 aacgcgcgcg aacgagggaa ccatgatgag tgaaatctat cgattctgct cactgcctcc
      601 ggacacccgc aatagacctc tgatggaaga cctcgcgatg cacctgaacg gatacttttg
      661 agcattgaac ggcatggcat tttaaagaca ctccggcttg ctgaatcagg ctagaatgat
      721 tctcttgtcg aacgcgattt tacgacaact tgcgctggca gttgttgtcc tgactactcc
      781 agaattgaca ctggcacagg ccccatccgg cgtaatcgag gggcagataa cagatgccag
      841 tggcgccgca attccgggcg ccgcagtcat catcaccgga tcgagcggtt cgactcgaac
      901 gtccgccgcc gacaaagaag gtcgctatcg gatcgacgga cttccgcccg cgtcgtacac
      961 ggtgcggatt cagagtcccg gtttcgcttt gttcacgagc gcggccatcg gtgtcggaag
     1021 ccaggttcaa accgtgaatg cgcgcctcga catccagacg gcgcgagcca atgttacagt
     1081 cgctgactcc gcgtcacagg tgggagtcga tccctcgcag aacctgggcc agattgttct
     1141 ccgtggcgac gatctcgatg cgtttgccga tgaccccgag gacctgacga acgaacttca
     1201 aatgcttgca gggccagcgg tcgggcccaa cgcgggacag attttcgttg acggttttac
     1261 gggcggcatc atgccgccga aagcgtctat tcgcgaaatc agagtaaatc agaatccgtt
     1321 tgcggccgaa tatgaccgcg ttggctttgg acgtgtcgaa gtgtttacga agcccggctc
     1381 cgacatgtac catggccagg cgtcattcga tttcggcaac cgggcgctga ccgcccgcaa
     1441 tccgtacctg accggaccca tcgttccgaa ctatcggcag gagattttcg ccggcaactt
     1501 cgcaggaccc
//
LOCUS       DATAVD010000913         3481 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_275625, whole genome shotgun sequence.
ACCESSION   DATAVD010000913 DATAVD010000000
VERSION     DATAVD010000913.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3481
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_275625"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..528
                     /locus_tag="VHX39_17585"
     CDS             <1..528
                     /locus_tag="VHX39_17585"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA];
                     GO_process: GO:0019439 - aromatic compound catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic-ring-hydroxylating dioxygenase subunit
                     beta"
                     /protein_id="HEX3992987.1"
                     /translation="ADAQPVSGMGTIHGGGHMITPNDLLAFVYREARLLDEQRFDEWL
                     ALFAPDGRYWMPLEYGQVDRRLTASLMDEDLFLLRLRVERLKGNRTYSQKPKSRCHHV
                     LQEPQVDVFDPAANRYVVWTAMHYVESRLDRQDLYAVWATHELTMIDDAVRIQMKRVD
                     LVNCDAAFGSIQLFP"
     gene            525..2081
                     /locus_tag="VHX39_17590"
     CDS             525..2081
                     /locus_tag="VHX39_17590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004271700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3992988.1"
                     /translation="MTQTVFDVFAGAAEAHAARPWLSVTFETGAAYGIEPGDITYAAA
                     WHSVQQLRVRYAEAGYRAGHRVGLLLENRPAFFLHWFALNALGVSIVPLNPDLRIIEL
                     SYVIAHSELVAIVAIPSRHAALAEAGGSVPITAPDADPAPVAGSGMAVDEAALLYTSG
                     TTGRPKGCVLPNQYFITAGDWYANLGGLGALRAGSERMLTPLPLFHMNALAYSAMAML
                     KTGGCLIPLDRFHPRSWWRTVRESGATVVHYLGVMPAILMADPVLAEDRAHAVRFGFG
                     AGVDGKLHAPFEQRFGFPLIEAWAMTETGAGAVVAACEEPRHIGTYCFGRPGPDVETR
                     IVSDDGTEQGELLVRHAGADPRHGFFREYLKDPEATAEAWADGWFHTGDVVRRGPDGS
                     MHFVDRRKNVIRRSGENIAAVEVESALRQHPAVTAVAVAPTGDPVRGEEVFACIVTNA
                     DAGEALARDITAWCVERLAYYKAPGYIAFVADLPLTSTQKIQRGELRNLVAASIATAH
                     DTRGLKRRPT"
     gene            2078..3241
                     /locus_tag="VHX39_17595"
     CDS             2078..3241
                     /locus_tag="VHX39_17595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004271699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HEX3992989.1"
                     /translation="MKRRGYDGVVLCAPVSVPYRRYSVESAHWWIGRALRAVTQRAGL
                     KPVDVDGLSVSSFTLAPDTTIGLTQHLGLSPRWLDHVPMGGAGGGVSLRRAARAVQAG
                     DADFVACIGADTNHVDSFRKTLSSFSRFAQDAVYPYGSGGPNASFALITRHYMNRTGA
                     TREDFGRICVAQRANAQRYDGALMQKPLTIDDYMNARSIADPIHLFDCVMPCAGAEAF
                     LICREDDARALGLPFARVLSAIERHNAYQDDPIQYRGGWAIDRDDLWAMAGIKPDAVD
                     FLQTYDDYPVIVMMQIEDLGFCAKGEAPAFVRSHTLTSDGDFPHNTSGGQLSVGQAGA
                     GGGHLGLVEAIRQLTGEAGKTAVANAKIGLVSGFGMINYDRGLASSAVLLGRA"
     gene            3238..>3481
                     /locus_tag="VHX39_17600"
     CDS             3238..>3481
                     /locus_tag="VHX39_17600"
                     /inference="COORDINATES: protein motif:HMM:NF023594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEX3992990.1"
                     /translation="MTEELVRPRRKDPLRKTREPLLPQGVRSRTAHGLTAAAAEGRFA
                     LQVCADCGFTVYPPRDVCPRCLSGRLPFRDVSPGGTV"
BASE COUNT          552 a          970 c         1204 g          755 t
ORIGIN      
        1 gcagatgcgc aaccagtttc gggcatgggc acgatacatg gcggcgggca catgatcacc
       61 ccgaacgatt tgcttgcgtt tgtgtatcgg gaggctcgtc tgctggatga gcagcggttc
      121 gacgaatggc tggcattgtt cgcgccggat gggcgctatt ggatgccgct ggagtatggc
      181 caggtggatc gccgactgac ggcgtcgctg atggatgagg atctgttcct gctgcgtttg
      241 cgggtggagc gcttgaaggg caaccgcacg tatagccaaa aaccgaagag ccggtgccat
      301 cacgtgctgc aagagcctca ggtcgatgta ttcgatcccg cggccaatcg ctatgtggtg
      361 tggacggcga tgcactatgt cgaatctcgc ctggatcggc aggatcttta tgccgtttgg
      421 gcgacgcatg agctgacgat gatcgacgac gcggtgcgga ttcagatgaa acgagttgac
      481 ctggtcaatt gcgacgccgc gttcggcagc attcagttgt tcccatgacc cagaccgtgt
      541 tcgatgtgtt tgctggcgcg gctgaagccc atgcggctcg tccatggttg tccgttacat
      601 ttgaaacggg tgccgcatat ggcattgaac cgggggacat cacgtatgcg gcggcctggc
      661 attccgtgca acagcttcgc gtccggtatg ctgaagccgg gtatcgcgcg ggtcaccggg
      721 ttggtctgct gctggaaaac cgtccggcgt tcttcctgca ctggtttgcg ctgaatgcgc
      781 tgggcgtttc gatcgttcca ttgaatcccg atttgcgtat catcgaattg tcctacgtca
      841 ttgcgcattc cgagcttgtt gcgatcgttg cgattcccag ccgtcatgcg gcgttagcgg
      901 aagctggcgg gtccgtcccc atcaccgcgc cggatgccga tccagcgccg gttgcagggt
      961 cggggatggc tgtggatgaa gcggcgctgc tgtatacgtc gggcaccacg gggcggccaa
     1021 aaggctgtgt gctgcccaat cagtatttca tcaccgcagg ggattggtac gcgaatctgg
     1081 gtggtctcgg cgcgttgcgg gccgggtcgg agcggatgct gacgccattg ccgctgtttc
     1141 atatgaacgc gttggcctat tccgcgatgg cgatgctgaa gaccggtggg tgcctgatcc
     1201 ctctggaccg tttccatccg cgttcgtggt ggcgcacggt gcgcgagtcc ggcgcgacgg
     1261 tggttcatta cctgggcgtc atgccggcga tcctgatggc cgacccggtt ttggcggaag
     1321 atcgggcgca tgcggttcgt tttgggtttg gtgcgggcgt ggatggcaag ctgcatgccc
     1381 cgttcgagca gcggtttggt ttcccgctga ttgaggcctg ggcgatgacg gaaaccggcg
     1441 ccggcgcggt tgttgccgcg tgtgaggagc ctcggcatat cggcacctat tgcttcggtc
     1501 gtcccggtcc ggatgtggag acccgcatcg tcagtgacga cggcaccgaa cagggtgagt
     1561 tgctggtccg ccatgccggt gccgatcctc gccatggctt cttccgcgag tacctgaagg
     1621 accccgaggc caccgccgaa gcctgggctg acggttggtt ccataccggt gacgttgtgc
     1681 gccgggggcc cgacggatcg atgcatttcg tggatcggcg caagaatgtc atccgcaggt
     1741 ccggtgagaa tatcgccgcg gtggaagtgg aaagtgccct gcgccagcac cctgccgtca
     1801 ccgcagttgc tgtggcaccc acgggagatc cagtgcgtgg cgaggaagtt ttcgcttgca
     1861 tcgtcaccaa tgcggacgcc ggtgaggcgt tagcccggga catcaccgct tggtgcgtgg
     1921 aacggctggc atactacaag gcgcctggct acatcgcctt cgttgcggat ctgccgttga
     1981 cctcgacaca gaaaatccaa cgcggcgagc tgcggaacct ggtggccgcg tcgattgcga
     2041 cagcgcatga tacgcgcggg ctgaaacggc gtccgacgtg aagcggcgcg gctatgatgg
     2101 cgtggtgctg tgcgcaccgg tcagcgtacc gtatcgccgc tattcggtgg agagtgcgca
     2161 ttggtggatc gggcgggcgc tgcgggccgt tacgcaacgt gccgggctga aaccggttga
     2221 tgtcgacggg ctgtcggtgt ccagcttcac attggcccct gatacgacca ttgggttgac
     2281 gcaacatctg gggttgtcgc cgcgctggct ggatcatgtg cccatgggcg gcgccggtgg
     2341 cggcgtatcg ttacgccgag cggcgagggc ggtgcaggcg ggcgatgcgg attttgttgc
     2401 gtgtatcggt gccgacacga accacgtcga cagttttcgc aagacattgt cgtcattttc
     2461 ccggttcgcg caggatgcgg tttatccgta cgggtcgggc ggaccgaatg ccagtttcgc
     2521 gctgatcact cgccactaca tgaaccgtac gggtgccacg cgggaggatt tcggccgcat
     2581 ctgtgttgcg cagcgtgcca atgcgcaacg ctacgacggc gcgctgatgc aaaagccact
     2641 gacgatcgat gactacatga acgctcgatc tattgccgat ccgatccatt tgtttgattg
     2701 tgtcatgcct tgcgccgggg ccgaggcttt cctgatctgc cgggaagatg atgcgcgcgc
     2761 gctggggttg cctttcgccc gcgtgctgtc ggccatcgag cgccacaatg cttaccagga
     2821 tgatccgatt cagtatcgcg gcggctgggc gatcgaccgg gatgatttgt gggcgatggc
     2881 cggcatcaag cccgacgcgg tggatttcct gcaaacctac gacgactatc cggtgatcgt
     2941 gatgatgcag atcgaggatt tggggttttg tgccaagggt gaggcgcctg cgttcgtgcg
     3001 gtcgcacact ttgacctcgg atggtgattt tccgcacaat acatccggtg ggcaactgtc
     3061 ggtcggccag gctggcgcgg ggggtggtca tctgggattg gtcgaggcga tccgccagtt
     3121 gaccggcgaa gcgggcaaaa ctgctgtggc caacgcgaag atcggcctgg tgtcgggctt
     3181 tggcatgatc aactacgatc gtgggctggc cagttccgcc gtgttgttgg gccgagcatg
     3241 accgaggaac tagtccggcc gcgccgcaag gacccgctgc gcaagacccg cgagccgttg
     3301 ctgccgcagg gcgtgcgcag ccgcaccgcg cacggcctga ccgctgccgc ggccgagggt
     3361 cgtttcgcgt tgcaggtctg tgccgattgc ggttttaccg tgtatccgcc gcgtgatgtc
     3421 tgccctcggt gcctgtctgg tcgattgccg ttccgggacg tctcgccggg gggcacggtg
     3481 c
//
LOCUS       DATAVD010000914         2038 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1016840, whole genome shotgun sequence.
ACCESSION   DATAVD010000914 DATAVD010000000
VERSION     DATAVD010000914.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1016840"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1101
                     /locus_tag="VHX39_17605"
     CDS             <1..1101
                     /locus_tag="VHX39_17605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton-translocating pyrophosphatase"
                     /protein_id="HEX3992991.1"
                     /translation="SLFVCAVVGLVITGAIVWITEYYTATEYRPVRSIAQSSTTGHGT
                     NVIQGLAISMEATALPVIVISMGIIVTFMVAGLFGIAVAATTMLSLAGMIVALDAYGP
                     VTDNAGGIAEMADLPSEVRVTTDALDAVGNTTKAVTKGYAIGSAGLASLVLFAAYTQD
                     LAHYFPGLKMDFALTNPFVVIGLFIGGMLPYLFGAMGMTAVGRAAGSVVVEVRRQFRD
                     IPGIMEGTAKPEYGTAVDLLTKAAIREMILPSLLPVLAPIVLWIVIDIIAGRAAAFAS
                     LGAMLLGTIVTGLFVAISMTSGGGAWDNAKKYIEEGHHGGKGSDAHRAAVTGDTVGDP
                     YKDTAGPAVNPMIKISNIVALLLLAVLAGMLK"
     gene            complement(1150..1401)
                     /locus_tag="VHX39_17610"
                     /pseudo
     CDS             complement(1150..1401)
                     /locus_tag="VHX39_17610"
                     /inference="COORDINATES: protein motif:HMM:NF027074.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system YafQ family
                     toxin"
     gene            complement(1426..>2038)
                     /locus_tag="VHX39_17615"
     CDS             complement(1426..>2038)
                     /locus_tag="VHX39_17615"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3992992.1"
                     /translation="LMFRFGNPPIYEPKLEDSFAAIAAREGRTPEEVTYDVLLESEGT
                     DFIYTTISSYAYGNLSMAEQLLGNPNCIMGLGDGGAHVAFILDAGFQTWMLTHWGREL
                     GKFSTEELIRRLTSDPAGAAGLHDRGILRAGMKADVNVIDWDRLGSGKPYMAYDLPAG
                     GKRLLQDVYGYEATIVAGQVTYREGQATGALPGKLVRGPQSAA"
BASE COUNT          349 a          620 c          670 g          399 t
ORIGIN      
        1 tcgctgttcg tttgcgccgt ggtcggcctg gtgattaccg gagcgatcgt gtggatcacc
       61 gaatactaca cggccaccga gtaccggccg gttcgctcga tcgcgcagag ctccacgacc
      121 ggtcatggca ccaacgtgat ccagggcctc gcgatttcca tggaggcaac cgcgctgccg
      181 gtcatcgtca tcagcatggg catcatcgtg accttcatgg tggcgggatt gttcggcatc
      241 gcggtggcag cgacgacgat gctgtcgctg gcggggatga tcgtggcatt ggacgcgtac
      301 ggcccggtga ccgacaatgc gggcggcatc gccgagatgg cggatctgcc cagtgaagta
      361 cgggtcacga cggacgcgct ggatgcggtg gggaatacga ccaaggcggt gaccaagggc
      421 tatgccatcg gctcggcggg cctcgcctcg ctggtgctgt tcgccgccta cacccaggac
      481 ctggcgcact attttccggg actgaagatg gacttcgcgt tgaccaatcc gttcgtggtg
      541 atcggattgt tcatcggcgg catgctgccc tatctgtttg gggcaatggg catgacggcc
      601 gttggccgag ccgccgggtc ggtcgtggtc gaagtccgcc ggcaatttcg tgacattccc
      661 ggcatcatgg aagggaccgc gaagccggaa tacggcactg cggtcgacct gctgaccaag
      721 gcagcgatcc gggagatgat cctgccttcg ctgctgccgg tgctggctcc gatcgtgctg
      781 tggatcgtga tcgacatcat cgccgggcgg gcggcagctt tcgcctcact gggtgcgatg
      841 cttctgggca ccatcgtgac cggcctgttc gtggcgatct cgatgacctc gggcggcgga
      901 gcgtgggaca atgcgaagaa gtatatcgag gaaggccatc atggcggcaa aggctccgac
      961 gcgcatcggg cggcggtgac cggtgatacg gtgggcgatc cgtacaagga tacggcgggt
     1021 ccggcggtga acccaatgat caagatcagc aacatcgtgg cgttgctgtt gttggcggtg
     1081 ctggcgggaa tgctgaagta ggtgcgaggc ctcgggcgaa cgcccggggc cgtttcactg
     1141 aggccgggct tactcgtcga acaggtcagt gtggcgtccg gttcgctcga agcgcacggt
     1201 atctccgtcc aatcgataga tcagaacctg gtccggttcg atatgcagat cgcgccatcc
     1261 gctccagttc ccccggagcg ggtggtcggc gtactctcgg ggtaatggcg agccttcgat
     1321 cagtctggac agagcgggct tcaggttctc catgtctttg ccacgccgtt gcgcaagcct
     1381 gacatcgcgt ttgaactgcc cggaataagc cgggcgccgg tcgcatcacg ccgccgactg
     1441 cggcccgcgc accagcttcc cgggcagcgc accggtggcc tgaccctcgc gatacgtcac
     1501 ctgacccgca acgatcgtcg cttcgtagcc gtatacgtcc tgcaacaacc gcttgccgcc
     1561 ggccggcaaa tcatacgcca tatagggctt gccggagccc aaccgatccc agtcgataac
     1621 gttcacatcg gccttcatgc cggcccgcag aatgcctcgg tcgtgcaatc cggcggcgcc
     1681 cgcggggtcg gaggtcaggc gcctgatcag ttcctcggtc gagaattttc ccagttcccg
     1741 gccccagtgc gtcagcatcc aggtctggaa gccggcgtcg agaatgaacg cgacgtgcgc
     1801 gccgccatcg cccagcccca tgatgcagtt ggggttgccc aacaactgct cggccatcga
     1861 gagattgcca tacgcgtagc ttgagatcgt tgtgtagatg aagtcggtgc cttcgctttc
     1921 cagcagaacg tcataagtga cctcttccgg cgtgcgcccc tcgcgcgctg cgatcgccgc
     1981 aaagctgtct tccagcttcg gctcgtagat cggtgggttg ccaaagcgga acatcaga
//
LOCUS       DATAVD010000915         1723 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1016902, whole genome shotgun sequence.
ACCESSION   DATAVD010000915 DATAVD010000000
VERSION     DATAVD010000915.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1016902"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1355)
                     /locus_tag="VHX39_17620"
     CDS             complement(<1..1355)
                     /locus_tag="VHX39_17620"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3992993.1"
                     /translation="MASESADFVIVGAGSAGCVMAARLSENPATKVVLLEAGGEDKNM
                     WIHIPLGFGKTFADPRVNWCYETEPDPGAGGRRIFWPRGKVLGGSSSINGMVYIRGQH
                     EDFDHWRQLGNPGWAASDVLPYFRRAEDQTRGGDEFHATGGPLCVSDVKDAHPLSEAF
                     IKACNDAGYPRNDDFNGRDQEGVGYHQTTTRNGKRCSTAVGYLHPVRSRPNLQVITGA
                     HTQKVLFEGSRAVGVAFRQGGADRSVRARKEVILCGGAIGSPQILLLSGVGPQDQLTE
                     FGIPVVQDLPGVGQSLQDHYSAAIKLKCRFPITINDVMQSNFKKLKAGLDYFMFRRGP
                     LTVSTADVALFARTRPELATPDVKLSLATFSADRPQDGLHAWSGFTLLVYQLRPDSRG
                     EIRLKSGNPADAPAMRPNYLSAATDQRTIVDGLKLGRSLLASSSMQPFIESEFVPGPA
                     VT"
     gene            complement(1357..>1723)
                     /locus_tag="VHX39_17625"
     CDS             complement(1357..>1723)
                     /locus_tag="VHX39_17625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HEX3992994.1"
                     /translation="NDQRTVVDGLKLIRRLLATRHFEPFIESEFRPGPDVRTDDELLH
                     YARQFGGTVYHPTSTCRMGNDPMAVVDPELRVHGIEGLRVVDASIMPTVASGNTNAPT
                     IMIAEKAVDMVRGRMAMAA"
BASE COUNT          339 a          555 c          495 g          334 t
ORIGIN      
        1 gtcaccgcag gaccggggac aaactctgac tcgataaacg gctgcatgga cgacgatgca
       61 agcaagctgc gacccagttt taacccatcg acgatggtgc gctggtcggt tgccgccgac
      121 aggtagttgg gccgcattgc cggcgcatcg gcagggttgc cggacttcaa ccggatttcg
      181 ccgcggctgt ccggccgcag ttgatagacc agcaacgtaa accccgacca ggcgtgcaat
      241 ccgtcttgcg gccggtccgc actgaacgtc gcaagagaaa gcttgacatc cggcgttgcc
      301 agttcgggcc gcgtgcgagc aaacagcgcc acatcggcgg ttgagacggt cagcggccct
      361 cggcggaaca taaaatagtc aaggccggct ttcagctttt tgaaattgct ctgcatcacg
      421 tcgttgatcg tgatggggaa ccggcatttc agtttgatcg ccgccgaata atggtcctgc
      481 agactttgcc caacgcccgg cagatcctgc accacgggaa tgccaaactc tgtcagttgg
      541 tcctgcggcc cgacacccga caacagcaga atctgtggcg agccgattgc gccgccacac
      601 agaatgactt ccttccgcgc ccgcaccgag cgatccgcac cgccttgccg gaacgccacg
      661 ccaaccgcgc ggcttccctc gaacagcacc ttctgagtat gcgcaccggt gatcacttgc
      721 agattgggcc ggctgcgcac cggatgcaga tatccgaccg cggtagagca acgcttgccg
      781 ttccgcgtcg tggtctgatg atagccgacg ccttcctgat cgcgtccatt gaagtcgtcg
      841 ttacggggat aaccggcgtc gttgcaggct ttaatgaacg cctcgctcag gggatgcgcg
      901 tctttcacat cggacacgca cagcggtcct ccggtcgcgt ggaattcatc tccaccgcgg
      961 gtctgatctt cggcgcgccg gaaatacggc aacacgtcgg aggccgccca tccgggattg
     1021 cccagttggc gccagtggtc gaagtcttcg tgctgaccgc ggatgtagac catgccgttg
     1081 atcgacgatg atccgcccaa cacttttccg cgcggccaaa agattcggcg gccgccggca
     1141 cccggatcgg gttcggtttc gtaacaccag ttcacccgag gatcggcaaa ggtcttgccg
     1201 aaaccaaggg gaatatggat ccacatgttt ttgtcttcgc cgccggcctc gagcaacacc
     1261 acctttgtcg caggattctc cgatagccgc gccgccatca cgcaaccggc tgacccggca
     1321 ccgacgataa caaaatccgc actctcgctt gccatgttac gctgccatcg ccatgcggcc
     1381 gcgcaccata tcgacggcct tttcggcaat catgatggtt ggcgcgttgg tgttcccgga
     1441 tgccacggtc ggcatgatcg aggcatcgac aacgcgcaat ccctcgatcc cgtggacacg
     1501 caactccgga tcgacgacgg ccatcggatc gttgcccatg cggcaggtac tggtcggatg
     1561 atacaccgtg ccgccaaact ggcgtgcgta atgcaacaat tcgtcatcgg tccgcacatc
     1621 cgggcctggc cggaattccg actcgataaa cggttcgaaa tgccgtgtcg ccagcagccg
     1681 tcggatcagt ttcagcccgt ccaccacggt gcgttgatcg ttc
//
LOCUS       DATAVD010000916         4861 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2693466, whole genome shotgun sequence.
ACCESSION   DATAVD010000916 DATAVD010000000
VERSION     DATAVD010000916.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4861
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2693466"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2440
                     /locus_tag="VHX39_17630"
     CDS             <1..2440
                     /locus_tag="VHX39_17630"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3992995.1"
                     /translation="DAEIRSNRDTEERLRSSDERLRDFAVMSSDWLWEQDADLRFTSI
                     GFEAPNPARDGKYIGKRRWEMQDTSQAPELWAAHQHEVMNHRPFRDFRYTIVDADGTH
                     HVSINGMPVFDEAGQFAGYRGTGRRVTHEVEAEAALREAKNRAEQAEALLRDAVNSMS
                     EGFVIYDSEDRLLLCNDAYRRMYPQSASLMVPGVKYESLIRNSLAAGRYPEAVGREEA
                     FLADMLRTHRNADSELEIKVSDDQWLLLTDRRMPDGNVACLRVDISALKKAKEALRDS
                     EARLERAQAIAGIGSWELDVDAGRYVWSKELYRIRGLSPETFNPTLDNVEPYVHPDDF
                     PPVRRWLSNLIAGHELDTHETRIIRPDGEVRVLCVEGRAVKDQDGIVRHIAGTMQDIT
                     DRRLIERQLSQAQKMEAIGNLTGGMAHDFNNGLGVIIGNLDLLERMVEANGTAAEVCA
                     EAREAAIRCADLIRGLLAFARRQPLQPRLTDVNALVKETARLLGRTLGEDIALNLTLS
                     TAPWPALADAAQLEAALVNLAMNARDAMPKGGQLRISTRNAQLDAAYAAMHPDAAEGD
                     YVLIEVSDTGEGIPPEIISRIFEPFFTTKELGKGTGLGLAMVFGFVKQSGGNLDVYSE
                     PGLGSTFRIYLPRAEASDEPAAMEAGRRPMVGGDETILLVEDNEKLRKVAARQLSELG
                     YRVLEAENAEAALHVVSSGDRIDLLFTDVVMPGSIDGFELARLVGRLRPRPEILLASG
                     FPDGRAPGQAPRPPEFRLLGKPYNLDELAHAVRDALIGRRDDAASDRPYSTSDQPAKT
                     RNSIEPGPAIRETV"
     gene            2443..3888
                     /locus_tag="VHX39_17635"
     CDS             2443..3888
                     /locus_tag="VHX39_17635"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX3992996.1"
                     /translation="MRMLVFDDDAAVGRLVMRVASLAGLEATAVTEPTAFRQSLIDAP
                     PQVILLDLQLGVTDGVEQLRYLAEQHYGGAIVVMSGFDARVLAATATVAKNLELNIAA
                     TLPKPIRVAELEDVIDRLKSVRQPISGDELLAAIRDNDLSLEFQPIVSWRPRALNKLE
                     ALVRWDHPEFGLISPADFLPLAETNRATIDALTDWVIGAAVEAWGVLRELDVNVPITV
                     NVSTLNLHDITLPDRLARRLAAAGMPAEMLCLEITETAASRDTARMMDILTRARLKGI
                     ELAIDDFGTGYSSLKALRQLPFSVIKIDRSFVSDMTTSPDSRAIVKSIIGLAANMNMS
                     TIAEGVETEETAELLEHMEVDALQGYLIARSMPVEAIASWRAIWVAGGALTDAAERED
                     TFASTNDRTSALNLLPAVSIGDARSLSVRQTEVMQLLTEGCSVKEIARRLDLSIGAVT
                     VQLSHAYSILGARDRTEAIIRAGLWPQQGAA"
     gene            complement(3940..4632)
                     /locus_tag="VHX39_17640"
     CDS             complement(3940..4632)
                     /locus_tag="VHX39_17640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992997.1"
                     /translation="MQVAAVVSQLACSVLGGDVHDGAIQLTGIAGPVALENLQQKFTT
                     MGLTNPASTLHVTQVEARFCPWENFLRPIAKGFGAGDDDLKLHLADDPAFLVNNDFIR
                     PRLTMAGFRGVMRVDYLDREGNVQHLFPQVADPSQHLAGDHLHRFEPGEALNLGEPGP
                     GRPGWQVAPPFGTDLIVAVASEDALFDHARPSNVENAEVYLRELKRAVEFARSRGARV
                     AATVVPVVTRAQ"
     gene            4631..>4861
                     /locus_tag="VHX39_17645"
     CDS             4631..>4861
                     /locus_tag="VHX39_17645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3992998.1"
                     /translation="MRIVSDGSADGGSVWDGGPPGGEARPTCDDPGGKVGLVCGGKVT
                     PACEEVLACEEVLGCAVVVLCDGVPGATVPVCD"
BASE COUNT          913 a         1483 c         1599 g          866 t
ORIGIN      
        1 ggacgccgaa atccgcagca accgtgacac cgaggaacgg ctgcgatcca gcgacgagcg
       61 gctgcgcgat tttgccgtga tgtcgtccga ctggctctgg gaacaggacg cggacctgcg
      121 gttcacctca atcggcttcg aagcccccaa tcccgcccgc gatggcaaat acatcggcaa
      181 gcgccgctgg gagatgcagg acaccagtca ggcccccgaa ctctgggctg cgcaccagca
      241 cgaggtcatg aaccatcgtc cgttccgcga cttccgctac accatcgtgg atgccgacgg
      301 cacgcatcac gtcagcatca acgggatgcc agtgttcgat gaggcgggtc agttcgcggg
      361 ctatcgcggc accggccgcc gggtcacgca cgaagtcgag gcagaggccg cgttgcgcga
      421 agccaagaac cgtgccgagc aggccgaggc cctgttgcgt gacgcagtga acagcatgtc
      481 cgagggcttc gtgatctacg acagcgaaga ccggctgttg ctgtgtaacg acgcctatcg
      541 ccgcatgtac ccgcaaagcg cgtcgctcat ggtgcctggg gtgaaatacg aaagcctgat
      601 ccgcaacagc ctggccgccg gacgataccc cgaggccgtc gggcgcgagg aagcattcct
      661 cgccgacatg ttgcggacac accggaatgc cgatagcgaa ctggagatca aggtcagcga
      721 tgaccagtgg ctgctgctga ccgatcggcg gatgcccgat ggcaatgtcg cctgtcttcg
      781 ggtcgacatc tccgccttga aaaaggccaa ggaggccctg cgcgacagcg aggcccgcct
      841 ggaacgcgcc caggcgattg ccgggatcgg cagttgggaa ctggacgtcg atgccggacg
      901 ctacgtttgg tcgaaggaac tgtaccgcat ccgcggtctc tcgccggaaa cgttcaaccc
      961 aaccttggac aacgtcgaac cctatgtgca ccccgacgat tttccgccgg tgcggcgttg
     1021 gctcagtaat ctgattgccg gacacgaact ggacacccat gagaccagga tcatccgacc
     1081 ggatggtgag gtgcgggtgc tttgcgtcga aggccgggcg gtgaaagacc aggacggcat
     1141 cgtccgccat atcgccggca ccatgcagga catcaccgac cggcggttga tcgagcggca
     1201 gttgtcgcag gctcaaaaga tggaggcgat cggcaacctc accggcggca tggcgcatga
     1261 cttcaacaac ggtctgggcg tcatcatcgg caatctggac ctgctggaac gcatggtcga
     1321 agccaacggc accgcggctg aggtctgtgc cgaggcgcgc gaggcagcga tccggtgtgc
     1381 cgatctgatc cgcggactgc tcgccttcgc cagacgccag ccactccagc caaggctcac
     1441 cgacgtcaat gcgctggtca aggaaaccgc ccgtctgctc ggccgtacgc ttggcgagga
     1501 tatcgcgctg aacctgaccc tcagcacggc tccatggccg gccttggccg atgcagccca
     1561 actcgaggca gcgctggtga acctggcgat gaacgcacgg gacgccatgc cgaaaggcgg
     1621 acagttgcgg atcagcacga ggaacgccca gttggacgcg gcctatgcag caatgcatcc
     1681 ggatgcggcg gagggtgatt acgtgctgat cgaggtcagc gatactgggg aaggcatccc
     1741 tccggagatt attagccgta ttttcgagcc attctttacc accaaggaac tcggcaaagg
     1801 caccggtctt ggtctggcga tggtattcgg cttcgttaag cagtcgggcg gcaacctcga
     1861 cgtttacagt gagccgggtc tgggctccac gttccggatc tacctgccgc gcgcagaggc
     1921 gagtgacgag ccggctgcaa tggaagccgg acgcaggccg atggtcggcg gcgatgagac
     1981 cattctgctg gtcgaggaca acgagaagct acgcaaggtt gcggcccgtc agttgagcga
     2041 acttggttat cgcgtgctgg aggcggagaa cgccgaggcc gcgttgcatg tcgtgtcgtc
     2101 gggggatcgg attgatctgc tgttcaccga tgtcgtcatg ccgggctcga tcgacggctt
     2161 cgaattggcc cgccttgtgg gccgtttgcg ccccaggccg gaaatcctgc tggcctccgg
     2221 cttccctgat gggcgagccc caggccaggc gccccgcccg ccggagtttc gcctcctcgg
     2281 caaaccttac aatctggacg aattggccca tgccgtgcgc gatgcactga ttgggcggcg
     2341 ggacgacgca gcttccgatc gtccctactc gacatccgac cagcccgcca aaaccaggaa
     2401 ctccattgaa cctgggccgg ccatcaggga gacggtgtga caatgcgtat gctggtattc
     2461 gacgacgatg ccgcggtcgg gcgcctcgtc atgcgggttg cctcgctcgc cgggctcgaa
     2521 gcgaccgcgg tcaccgagcc aacggcgttc cggcaaagcc tgatcgatgc accgccgcag
     2581 gttattttac tcgacctgca gcttggcgtt accgatgggg tcgagcaatt acggtatctc
     2641 gccgagcaac attacggcgg cgccatcgtg gtcatgagcg gatttgacgc ccgcgtgctg
     2701 gcggcgacag cgacggtcgc aaaaaatctc gagctcaata ttgccgcgac gctgcccaag
     2761 ccgatccggg tcgccgaact agaagacgtc atcgaccggc tgaaatcggt ccgccagccg
     2821 atctcgggcg acgagttgct ggctgccatt cgcgacaatg acctgagcct ggaatttcag
     2881 ccgatcgtga gctggcggcc gcgtgcgctg aacaagctgg aggcgttggt gcggtgggat
     2941 catccggagt tcgggctgat atcgccggcc gatttcctcc cgctcgccga gaccaatcgg
     3001 gcgacgatcg atgcgctgac cgattgggtg atcggcgcgg cggtcgaggc gtggggcgtg
     3061 ttgcgcgaac tcgacgtgaa cgtaccgatt accgtcaatg tctcgacgct taatctgcat
     3121 gacattactt tgccggatcg gttggcccgg cggctggcgg ctgccggcat gcctgccgag
     3181 atgctttgcc tggaaatcac cgagactgcc gcttcgcgcg acaccgcccg gatgatggac
     3241 atcctgacgc gggcccggtt gaagggaatt gaactcgcga tcgacgattt cggcaccggt
     3301 tattcgtcat tgaaggcgtt gcggcagttg ccgttctcgg tgatcaagat cgaccggtca
     3361 ttcgtcagcg acatgaccac gtcgcctgac tcgcgggcga tcgtgaagtc aatcatcggg
     3421 ctcgctgcga acatgaacat gtcgacgatt gccgaaggcg tcgaaaccga agagaccgcc
     3481 gagttgttgg aacacatgga ggtcgacgca ctgcaaggct acctcattgc gcggtcgatg
     3541 ccggtggaag cgattgcatc gtggcgcgcg atctgggtcg cagggggcgc actgacggac
     3601 gcggccgagc gggaagatac gttcgcatcg acgaatgatc ggacctcggc actgaactta
     3661 cttcctgccg tcagcatcgg cgatgcgcga agtttgtcgg tgcggcaaac cgaggtaatg
     3721 cagttgctga ccgaagggtg ctcggtcaag gaaatcgcgc gccggctcga tctgtcgatt
     3781 ggcgcagtaa cggtccagct ttcccacgcc tattccattc tgggtgcgcg cgaccggacc
     3841 gaggcgatta tccgcgcagg gctttggccg cagcaggggg cggcgtagct cgtcacggcc
     3901 agatttgtcc tatagccgga actcgggaat ttatgttcgt tactgcgccc gtgtcaccac
     3961 cggcaccacc gttgccgcga cccgtgcgcc acgcgaccgg gcgaattcca ctgcccgttt
     4021 cagctcccgc agataaacct cggcgttctc cacattcgag ggccgcgcat ggtcgaacag
     4081 cgcgtcctcc gaggcgaccg cgacgatgag gtcggtgccg aatgggggcg ccacctgcca
     4141 gcctggcctg ccgggtcctg gctcgcccaa attcaacgcc tcgcccggct cgaaccgatg
     4201 caggtggtcg ccagccaggt gctggctggg gtcggcgact tgcggaaaca ggtgctgaac
     4261 gttgccctcg cggtccaggt agtcgacccg catgacccct cgaaagccag ccatggtgag
     4321 acgcgggcga atgaaatcgt tgttcaccag gaaggccgga tcgtcggcaa gatgcaattt
     4381 caggtcgtcg tcgccggcgc cgaacccttt ggcaatcggg cggaggaagt tctcccaggg
     4441 acaaaaccgc gcctcaacct gggttacgtg caacgtggac gccggattgg tcaggcccat
     4501 cgtggtaaac ttctgctgca ggttctccag agcgactggg ccggcgattc cggtcagttg
     4561 gatcgcgccg tcatgcacgt cgccgcccag taccgagcag gctaactgcg atacgaccgc
     4621 agcgacctgc atgcggatcg tttccgacgg gtccgcggac gggggcagtg tttgggacgg
     4681 gggcccgcct ggcggcgagg cgagaccgac ctgcgatgac ccgggcggta aagtgggatt
     4741 ggtctgcggt ggcaaggtaa cgccggcctg cgaagaagta ctggcctgcg aggaagtact
     4801 gggctgtgcg gttgtcgtgc tctgcgatgg cgtgcccggc gccaccgtgc cggtctgcga
     4861 t
//
LOCUS       DATAVD010000917         2205 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3064095, whole genome shotgun sequence.
ACCESSION   DATAVD010000917 DATAVD010000000
VERSION     DATAVD010000917.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3064095"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..533
                     /locus_tag="VHX39_17650"
     CDS             <1..533
                     /locus_tag="VHX39_17650"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008263 - pyrimidine-specific mismatch
                     base pair DNA N-glycosylase activity [Evidence IEA];
                     GO_process: GO:0006285 - base-excision repair, AP site
                     formation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="mismatch-specific DNA-glycosylase"
                     /protein_id="HEX3992999.1"
                     /translation="PDLLRDGLDIVFIGINPSVYSVAQGHYFARKTNRFWPSFSRSVL
                     SAPARRALGVAQLLPAHDAALLDHGIGFTDVVKRATARADELDPNEFAAATRELVAKL
                     ESFQPRIACFHGMMGYRPFVRLHAPTLPVAVLGEQPLRLGRTRLFVIPNPSPANAHAS
                     PAVQTEWYDRLAAALN"
     gene            complement(570..1187)
                     /locus_tag="VHX39_17655"
     CDS             complement(570..1187)
                     /locus_tag="VHX39_17655"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HEX3993000.1"
                     /translation="MLFYDSIGPNPKVVRMFMAERGISGIPSETIDLRGGENRREPFL
                     SRNPAGTCPALTLDNGMVLAEITAICEYLDEIGPAGTTLIGKTPEERAETRMWTRRID
                     LHILEPMANGFRYTDGLKMFENRIHCIPAAGADLKAIAQEGVTWLDSLIGGRTFICGE
                     RLTLADILLFVFLDFFVAVKQPLNDANKNIVAWYSRMKARPSTSA"
     gene            complement(1275..1412)
                     /locus_tag="VHX39_17660"
     CDS             complement(1275..1412)
                     /locus_tag="VHX39_17660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993001.1"
                     /translation="MAKGMNRGNREPKKPKAKKPASGPTVSPLSPKGMAARPDLPKKK
                     D"
     gene            complement(1605..1817)
                     /locus_tag="VHX39_17665"
     CDS             complement(1605..1817)
                     /locus_tag="VHX39_17665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX3993002.1"
                     /translation="MPTGTVKWFNSQKGFGFIQPDQGGPDAFVHISAVERAGLRDLRE
                     GQKVDFELVSDRKSGKMSADNLKVHA"
BASE COUNT          429 a          683 c          651 g          442 t
ORIGIN      
        1 tgcctgattt attgcgcgac ggcctcgata tcgtgttcat cgggatcaac ccgtcggtct
       61 attcggtagc gcaaggacat tatttcgcac ggaagacgaa ccggttctgg ccgtcgttct
      121 cgcgctccgt cctcagcgcg ccggcgcggc gggctctggg cgttgcgcaa ctgctgccgg
      181 cacacgacgc ggcgctgctg gatcacggca tcggctttac cgacgtcgtg aagcgggcca
      241 cggcgcgagc ggacgaactc gaccccaacg aattcgccgc agcgacgcgc gagctggtgg
      301 caaaactgga aagcttccag ccgcgcattg catgcttcca cgggatgatg ggctatcggc
      361 cgttcgtccg tttgcacgcg ccaacgttgc cggttgcggt actcggcgag cagccgctcc
      421 gcctcggccg gacgcggctg ttcgttatcc caaatccaag tccggccaac gcacatgcct
      481 cgccggctgt gcagaccgaa tggtacgacc ggcttgcagc agccctgaat taatcacgcc
      541 gcagcgctta atcacgccgc agcgcttaat cacgccgaag tactgggccg tgccttcatc
      601 ctgctgtacc acgccacgat atttttgttc gcatcgttca acggctgttt aaccgcgaca
      661 aagaagtcca ggaacacgaa aagcaggata tccgccagcg tcagccgctc gccacaaatg
      721 aatgtcctgc cgccaataag actgtccaac catgtcaccc cctcctgagc aatcgccttc
      781 aggtcggcac ccgcagcggg gatgcaatgg atgcggttct caaacatttt caaaccgtcg
      841 gtataacgaa aaccgttcgc catcggctcc aggatgtgaa gatcgatgcg acgggtccac
      901 atgcgtgtct cagctcgctc ctcgggagtc ttcccgatca gcgtggtgcc cgcgggcccg
      961 atttcatcga gatattcgca aatggcagtg atttctgcca acaccatccc gttatccaat
     1021 gtcagggcgg gacaggtgcc agcggggttg cgggacaaga atggctcccg ccgattttcg
     1081 ccaccgcgca ggtcgatggt ttcggacggg atgccgctga tgccccgctc cgccatgaac
     1141 atccgcacca ctttcgggtt cgggccgatc gaatcgtaaa atagcataag gtgcctccct
     1201 ccccggacat cgccgggtca ggcggtcaaa ccatcaacct cgttttggcg caagtgccga
     1261 tagcgcgagg ccggtcaatc cttctttttg ggcaaatccg gccgcgctgc catgcctttc
     1321 ggcgacaacg gcgagactgt cggcccagaa gccggcttct tggctttcgg ctttttcggc
     1381 tctcgattac cgcggttcat gcccttggcc atcgatggct cctgtgcgcc tggtcagaaa
     1441 agcgcgcgct ttgaaaacgg caagcaactc gcataccgag catttggtcg caggaccccg
     1501 tccggaccat gatcgccggt gtgcgagacg ccatcaggac acgcggtgaa gcaaaaccgc
     1561 acgacgccgg cggcccgaag gccgcgacat cggccgggtc agtatcaggc gtgaaccttc
     1621 aggttgtcgg cggacatctt gccgcttttg cggtcggaga ccagttcgaa gtccaccttc
     1681 tggccttcgc gcaggtcacg caatccggcg cgctccaccg cactaatgtg gacaaaggcg
     1741 tcgggtccac cttgatcggg ttggatgaag ccaaagcctt tttggctgtt gaaccacttg
     1801 acggttccag taggcatgag aagccctttc agaatcatag gtttgtgcac cggcgaagcg
     1861 gccggctgtc gaatcagcga tttcgggaac aaaagggggt cgaccgacgc acaatctcct
     1921 gaacgcgggg ccgagttttc tgaccgtctt tcgaccgttg tcatgtgcgc cgttcgctgg
     1981 cggaatacaa ggaggggaaa tgcactttcg atggatcgga taggttcgtg cgcgtggccg
     2041 ctgccattat tctctgaggt cgcagagcgc actggagggc gcggagacgc acgccacgcg
     2101 ccggatgcta tcgtctcagc gtcctcggtg aatttgccga cgttgcagca gtcatggacc
     2161 tgtgacggaa cgatcagcgc cgcaacgaac ttgcacgacg gggac
//
LOCUS       DATAVD010000918         2638 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1389807, whole genome shotgun sequence.
ACCESSION   DATAVD010000918 DATAVD010000000
VERSION     DATAVD010000918.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2638
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1389807"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(560..1108)
                     /locus_tag="VHX39_17670"
     CDS             complement(560..1108)
                     /locus_tag="VHX39_17670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993003.1"
                     /translation="MNAAVMRMCTWSWLLAILAMLPAFARADSGTIRISQRHSKHQIT
                     VFTDPTPLRAGPVDVSVLVQDLETGIPDLTPAIDVCIQPRERSTNVVRYRATSAAAST
                     KLFQAANFDLPRAGWWEITIDVYGSDQSARVCFDVEAAEPLPPWQELWPWFCWPLFVV
                     ALFAVCQHRVSQVGTRHRKGVP"
     gene            complement(1116..>2638)
                     /locus_tag="VHX39_17675"
     CDS             complement(1116..>2638)
                     /locus_tag="VHX39_17675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993004.1"
                     /translation="QTNRRKTTAEQASNAYGVTSLSLPVLNPADRHSSASTRQSWIFN
                     ALSAFLRWRHARTVLQIPLLILAMVVIFDGLCGPQISPLNLAGVLPWIHWRGMVVLGL
                     LAVGNVSCMACPFTLPRRLARRWLPQGRSWPRALQSKWLAVVLIGLFLWAYEAFALWD
                     SPWWTAWIAIGYFVAAFAVDGFFRGASFCKYVCPIGQFNFVQSLVSPLEVRVRDPEIC
                     TTCRSKDCIRGRGSIPGCELDLFQPRKSGNMDCTFCLDCVQACPHANVGLLASAPGSQ
                     LWHDRFRSGVGQLGKRPDVAALVVLLVFGSFANAAGMVRPVVEWQQRAQVALGLPPRT
                     IVTVYYLLALVVIPLAMMWLVSTAARHWARLPSTWIELVTRYSYALVPLALGMWLAHY
                     SFHLLTSYEAVVPAAQRFATDLGVIDFGNLHLKCSCCAAPIAKWLLRAELTFLACGFL
                     LSLYTAYRTALADRPSSRQALMAYLPWSVLLVQLYALGVWIVFQPMQMRGSTMMGW"
BASE COUNT          624 a          794 c          763 g          457 t
ORIGIN      
        1 tgctgggatt cccattgcca gcgacgagtc acgcaacacc gccgatgtcc gcaaggcgcg
       61 gatcgagtcg attggctatg agatgccgcc gaacgacagg tgcgtaatcg ggcggcaatg
      121 gaccgctacc ggcgaggaca agccgacgcc gatcaagaag tcaagccggc gataaccgac
      181 ttccgcgagt tacgagcgct gatcggccgc gcgctcaaag atagtaaagc catgcaatga
      241 tgcgatgcac cgcgcgcgtc actccgttga gccaacgccg ttggtccaca gaccgaggcg
      301 ctggcggtca tgccggcacg caacggcatt ttgttctgat cttctccgtc ttcaagctcg
      361 atgcgcactt ggaatcattg ggcaggagga atccagtgcc tgttcactgg attcgggcgg
      421 ccttcactgg ccagacagaa cccggcggcc actgcgacca ggaccaataa agcgagccgc
      481 ggcctaatca gttgggcaac gtccgaaacc tcgactcgca tctgcggaag cgtattcaca
      541 tatgctggca ctgtattctt catggaacac ctttcctgtg tcttgtgccg acctgcgaca
      601 cgcgatgttg acagacggca aatagggcga cgacgaacaa tggccagcag aaccaaggcc
      661 acaactcttg ccacggtggc agtggctctg ccgcctcgac atcgaaacaa actcgggcgc
      721 tctggtccga gccgtaaaca tcaatggtga tttcccacca gccggcgcga ggcaaatcaa
      781 agttggccgc ttgaaatagc ttggtgctgg cggcggcgct ggtcgcgcga taccggacta
      841 cgttcgttga tcgctcacgg ggctggatgc aaacgtcgat tgccggtgtt aaatcaggga
      901 tgccggtttc aagatcctga accagcacgc tcacatcgac cggcccggca cgcaacggcg
      961 tggggtcggt aaacaccgtg atttggtgct tgctgtgcct ctgtgagatg cggatggttc
     1021 cagagtctgc gcgagcaaac gcaggcaaca tggccaaaat tgccaacaac caggaccacg
     1081 tacacattct catcacggca gcgttcatcg cacctctacc atcccatcat cgtcgaaccg
     1141 cgcatttgca tcggttgaaa aacgatccag acaccaagcg catagagttg cacgagcaga
     1201 accgaccagg gaagatacgc catcagcgct tgtcgcgatg atgggcgatc ggccaaagca
     1261 gttcggtagg ctgtgtagag cgacaacaag aagccacagg ccaagaacgt caactccgcg
     1321 cgcaacagcc acttagcaat gggggccgcg cagcaagagc attttagatg aagatttcca
     1381 aagtcgatca cgccgaggtc cgtcgcaaat ctctgtgcgg cggggacgac cgcttcgtag
     1441 ctggtgagca ggtgaaagct gtagtgggcc agccacatgc ccagtgcgag cggaaccagc
     1501 gcatagctat agcgcgtcac cagctcgatc caagtcgatg gcaatctcgc ccaatgacga
     1561 gccgccgtgc tcacgagcca catcatggca agcggtatca cgaccagcgc gaggaggtag
     1621 tacaccgtga cgatcgtccg aggaggcaaa cccaaggcaa cttgcgccct ctgctgccac
     1681 tccaccaccg gtcgcaccat gcccgccgcg ttggcgaacg atccgaagac aagcaatacg
     1741 acgagcgccg cgacatccgg gcgctttccc agttggccga cgcctgaacg aaaccggtcg
     1801 tgccaaagct gcgagccggg cgcactggcc agcaggccga cattcgcatg ggggcaggcc
     1861 tgaacacaat cgagacagaa tgtgcagtcc atgtttcctg atttgcgcgg ttgaaagagg
     1921 tcgagctcgc agcccggaat gcttcctcga ccgcgaatgc agtccttgct tcggcatgtc
     1981 gtgcatatct caggatcgcg gaccctcacc tccagcggcg atacgagcga ttgcacgaag
     2041 ttgaactgac cgatcgggca gacgtatttg cagaacgaag ctccgcgaaa gaatccgtcg
     2101 acggcgaaag cggccacgaa atagccgatc gcgatccaag cggtccacca cgggctgtcc
     2161 caaagagcaa aggcttcata cgcccatagg aacaatccga tcagcaccac ggccagccat
     2221 ttgctttgca acgcgcgcgg ccatgaacgg ccttgcggta accatcgccg cgccagtcgg
     2281 cgtggcagcg tgaaggggca ggccatgcac gacacatttc ccacagccaa cagacctaat
     2341 accaccattc ctcgccaatg aatccacggc aagactcccg ccagattgag cgggctgatc
     2401 tgcggcccgc acagaccatc gaagatgaca accatggcca agatcaacag tgggatttgc
     2461 aacaccgttc gcgcatgacg ccatcgcagg aaggccgata aggcgttgaa aatccatgat
     2521 tgccgggtgg acgctgacga atggcggtca gcagggttga gcacgggaag actgagagat
     2581 gtcacgccat acgcattcga tgcttgctcg gccgtcgtct ttctgcggtt tgtctgtg
//
LOCUS       DATAVD010000919         4783 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2320223, whole genome shotgun sequence.
ACCESSION   DATAVD010000919 DATAVD010000000
VERSION     DATAVD010000919.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4783
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2320223"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..350
                     /locus_tag="VHX39_17680"
     CDS             <1..350
                     /locus_tag="VHX39_17680"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX3993005.1"
                     /translation="ILRAGINSIRPGQTRAAQALGMSGAQVVSKVVFPQAVIRMLPAL
                     GSIVSVTIKDTAIAATIAVPEYMERSQTLAGQSFRPVEVFTTAMIVYFVILFPATRAV
                     DMLYRRVAHLGRS"
     gene            347..1006
                     /locus_tag="VHX39_17685"
     CDS             347..1006
                     /locus_tag="VHX39_17685"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX3993006.1"
                     /translation="MTFDWGIIWHYRAALADGVAMTVLLAVATMLIAIPGGIVLALMR
                     LSPLRPVSAASACFVEFFRNIPLILLVYWAYYVMPVAIGIEFSAFTTGLAALSLNVSA
                     YNAETFRAGIVSIRRGQGEAALALGMSQWQVMRQVVLPQAVRRVLPVLASTWVSLFKD
                     TSLVSVIGVSELAYVSLQIRSQTFRILEMLTAMAAIYWLLGYPQAKLVDWIHRRYGVS
                     E"
     gene            1003..1749
                     /locus_tag="VHX39_17690"
     CDS             1003..1749
                     /locus_tag="VHX39_17690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEX3993007.1"
                     /translation="MNATVVLDYRDVRKNFGSFVALDGVSTRVHKGEVVCLIGPSGSG
                     KSTLLRCTNGLEKLDGGTISLDGIALPDNETGMRDVRRRMGMVFQSFELFPHRTVIAN
                     VMMGPITVLRLSRHDARQRAEALLEKVGLSEKAESHPASLSGGQQQRVAIARALAMQP
                     EVMLFDEPTSALDPETVGEVLNVMKRLADEGMTMVVVTHEMSFARRVANRVVVFERGA
                     IVEEGPPSQIFDAPTVARTRDFLGHLGWHG"
     gene            1746..3179
                     /locus_tag="VHX39_17695"
     CDS             1746..3179
                     /locus_tag="VHX39_17695"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HEX3993008.1"
                     /translation="MTGRLSNTTLSGVTVAKPGYDRRMLRPRIVHLGLGAFFRAHGAI
                     YTEDAGGDWGIAGVSLQRPDQRDRLTPQDGLYTTLERDGAGTRARVIGSVLSVLVAPE
                     DPNAVVALMAAPATSIVSLTVTEKGYCHNPATSRLNPSHPDIVHDLAHPDAPRSAVGF
                     IVAGLAVRRAAGQKPFVVITCDNLPANGQLLAGLVRDFAALRDPALADWIAMNVAFPA
                     TMVDRIVPAMTQVDTHDAQAAIGLSDAAPVSHEPFRQWVIQDRFGDAERPAWENAGAQ
                     IVADVAPFEHMKLRLLNGAHSALAYLGYLAGHETIFDAVSDPVLNGFVQRLWAEIIPM
                     VPPPPGTDLRRYTRDLLARFANPTVRHRTWQIAMDGSQKLPQRLLGTIRERLAARLPI
                     PSLALAVAAWVRYAGGIDEAGRPIDVRDPMAARLQALANSDDPLTGILTVGEIFGTDL
                     PTDPAFVGPLTQAYRRLREDGVRTAAQ"
     gene            3192..4379
                     /gene="uxuA"
                     /locus_tag="VHX39_17700"
     CDS             3192..4379
                     /gene="uxuA"
                     /locus_tag="VHX39_17700"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008927 - mannonate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006064 - glucuronate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HEX3993009.1"
                     /translation="MEQTWRWFGPADAVQLHEIRQTGATGIVTALHDIPYGVVWPQQA
                     IAERKATIEAAGLRWSVVESLPVSEAIKLGDGDLQPLFANYRESLRNLAAQGVNCVCY
                     NFMPVLDWTRTQLAVPLPGGGTALRFNAHEHAAFDCFMLQRPGAEADHKPEVLTRARA
                     WFDAASESTKDALLNTIMAGLPGAYKRYDVAGLRHVLDAYKGITRNDLRARLADFLRA
                     VVPTAAEVGVRLCIHPDDPPRPLFGLPRVVSNQDDIAFLLDTIDAHENGLTLCTGSLG
                     AGATNDLPAIATRFAGRTHFVHLRNVSKEPDGSFQEADHLDGDVDMVAVVTAMLAEQH
                     RRRDNGDADWRIPMRPDHGHELLDDGQRKTHPGYPLVGRLRGLAELRGVMTAVASLRK
                     YPV"
     gene            complement(4585..>4783)
                     /locus_tag="VHX39_17705"
     CDS             complement(4585..>4783)
                     /locus_tag="VHX39_17705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012569179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993010.1"
                     /translation="AWRDSVLPPGVRRVSVEAGSTMGWYKYVGLDGAVVGIDRFGESA
                     PGPAVMKFFGFTAEHVAEVVG"
BASE COUNT          845 a         1675 c         1454 g          809 t
ORIGIN      
        1 aaatcctccg cgccggcatc aactcgatcc ggcccgggca aacgcgcgcc gcccaggcgt
       61 tgggcatgtc cggcgcgcag gtcgtcagca aggtggtatt cccccaggcg gttatccgga
      121 tgctgcctgc gcttgggtcg atcgtatcgg tgaccatcaa ggacacggcg atcgccgcca
      181 ccattgccgt accggaatac atggaacgat cgcagaccct ggccggccag agtttccgcc
      241 ccgtcgaggt cttcaccacc gcaatgatcg tctacttcgt catcctgttt ccggcaaccc
      301 gagcggtcga catgctgtat cgccgcgtcg cgcatctggg ccggtcatga cgttcgattg
      361 gggcatcatc tggcactatc gcgccgcgct tgcggacggc gtcgcaatga cggtgctgct
      421 ggccgtcgcc accatgctga tcgcaatccc cggcggcatc gtgctcgcgc tgatgcgcct
      481 gtcgccgctg cgtccagtat ccgccgccag cgcctgcttc gtcgagttct tccgcaatat
      541 cccgctgatc ctgctggtct actgggccta ttacgtgatg ccggtcgcga tcggcatcga
      601 attctccgcg ttcaccacgg gactggcggc actcagcctg aacgtatcgg cctacaatgc
      661 ggaaacattc agggctggga tcgtctcgat acgacgtggg cagggggagg cagcgctggc
      721 gctgggcatg agccaatggc aggtcatgcg ccaggtcgtg ttgccgcagg cggtccggcg
      781 cgtgctgccc gtgctggcca gcacctgggt ctcgctgttc aaggacacat cgctggtctc
      841 ggtgatcggc gtcagcgaac tggcctacgt gtcgttgcag atccgctcgc agaccttccg
      901 catcctcgaa atgctgaccg ccatggcggc gatctactgg ttgctgggtt atccgcaggc
      961 caagcttgtc gactggattc accggcgcta cggagtttcc gaatgaacgc aaccgtggtt
     1021 ctcgattatc gcgacgtacg caagaatttt ggcagtttcg tcgccctgga cggcgtttcg
     1081 acccgtgtgc acaagggcga ggtcgtttgc ctgatcggcc cgtcagggtc cggcaaatca
     1141 acgctgcttc gttgcaccaa cggcctggaa aagctcgatg gcggcaccat cagcctcgac
     1201 gggatcgcgc tgccggacaa tgaaaccgga atgcgcgacg tccgccgccg catgggcatg
     1261 gtgttccaga gtttcgagtt gttcccccac cgaaccgtca tcgccaacgt catgatgggc
     1321 cccatcaccg tcctccgcct ctcccgccac gatgctcggc agcgcgccga ggcgctgctg
     1381 gaaaaggtcg gcctgtcgga aaaagccgag agccaccctg ccagtctgtc cggcggccag
     1441 cagcagcgcg tcgccatcgc cagggcgctc gcgatgcagc cggaggtgat gttgttcgac
     1501 gaaccaacct ccgccctcga tcccgaaaca gtgggcgaag tcctgaacgt gatgaaacgc
     1561 ctggcagacg aaggcatgac gatggttgtc gtgacccatg aaatgagttt cgcccgccgc
     1621 gtcgccaacc gcgtggtcgt cttcgagcgc ggcgcgatcg tcgaggaagg cccgccgtca
     1681 cagattttcg atgcccccac ggtcgcccga acccgcgatt tcctgggcca tctggggtgg
     1741 cacggatgac cggccgtctc tccaacacga ccctgtccgg cgtaacggtc gccaaacccg
     1801 gctacgaccg ccggatgttg cgcccacgga tcgtgcatct cggcctgggt gcgttcttcc
     1861 gcgcgcatgg agcgatctat accgaggatg ccggcggcga ttggggcatt gccggcgtca
     1921 gcctgcaacg ccccgatcag cgcgaccgcc tgaccccgca ggacggcctc tacacgaccc
     1981 tggaacgcga cggcgccggc acccgcgcca gggtgatcgg ttcggtgctg tccgtgctgg
     2041 tggcccccga ggacccgaac gcggtcgttg cgctgatggc agccccggcg acatcaatcg
     2101 tttcgctgac cgtgaccgag aaaggctact gccacaaccc cgcgacaagc cgcctgaacc
     2161 catcgcatcc cgacatcgtg catgacctcg cgcatcccga tgcaccccgt tccgcggtcg
     2221 gtttcatcgt ggcaggcctg gcggtccggc gggcagccgg ccaaaagccg ttcgttgtca
     2281 tcacctgcga caacctgccg gcgaacggcc agcttctggc cggcctggtg cgggatttcg
     2341 cggcactgcg cgatcccgcc ctggcggact ggatcgcgat gaacgtcgcg ttccccgcca
     2401 ccatggtgga ccgcatcgtc cccgcgatga cccaagtcga cacgcacgat gcccaggcgg
     2461 cgatcggtct ttcggacgcc gcgccggtct cgcacgaacc attccgccaa tgggtcattc
     2521 aggaccgctt cggcgacgcg gagcgaccgg cctgggaaaa cgccggggca cagatcgtcg
     2581 ccgacgtggc gccgttcgag cacatgaaac tgcgcctgct gaacggcgcc cattccgccc
     2641 tggcctatct cgggtatctc gcggggcacg aaacgatctt cgatgccgta tccgatccgg
     2701 tactgaacgg attcgtgcaa cgcctgtggg cggaaataat cccgatggtg ccgccgccgc
     2761 cgggaaccga tctgcgccgc tacacccggg acctgctggc ccgcttcgcc aacccgaccg
     2821 tgcggcaccg gacgtggcag atcgccatgg atggctcgca gaaactgccg cagcgcctgc
     2881 tgggcaccat tcgcgagcgg ctggcggccc gcctgccgat cccgtcattg gcgctcgccg
     2941 tcgccgcctg ggttcgctac gccggcggca tcgatgaagc cggccggccg atcgatgtgc
     3001 gcgaccccat ggcagcgaga ctgcaagcgc tcgccaacag cgacgatccg ctgacaggca
     3061 tcctgacggt cggggaaata ttcggcaccg acctacccac cgatccagcc ttcgtcggac
     3121 cgctgaccca ggcctatcgc cgcctgcgcg aagacggcgt ccgcacagcc gcacaatagg
     3181 ggagacgaaa aatggaacag acatggcgct ggttcggccc agccgacgcg gtccagcttc
     3241 acgaaattcg ccagaccggc gcaaccggca tcgtcaccgc cctgcacgac atcccctacg
     3301 gcgtggtctg gccgcagcaa gccatcgccg aacgcaaagc gacaatcgaa gccgccggat
     3361 tgcgctggag cgtggtcgaa agcctgccgg tctccgaggc catcaagctc ggcgacggcg
     3421 acctgcagcc actgttcgcc aactatcgcg agtcattacg caatctggca gcgcaagggg
     3481 tcaactgtgt ctgctacaac ttcatgccgg tgctggactg gacccgcacc caactcgcgg
     3541 tcccgctgcc gggcggtggc acggccctgc gtttcaacgc ccacgaacac gccgcgttcg
     3601 actgcttcat gctgcaacgg cccggcgcgg aagcggacca caagccggag gtcctgaccc
     3661 gcgcccgagc gtggttcgac gcggcgtcgg aatcgaccaa agatgcgctt ctcaacacca
     3721 tcatggccgg gttgcccggt gcctacaaac gctatgacgt ggccggcctg cgccatgtcc
     3781 tcgacgccta caaaggtatc acccgcaacg acctacgcgc tcggcttgcc gatttcctgc
     3841 gcgccgtcgt cccgaccgcc gccgaggtcg gcgtccggct gtgcatccac cccgacgatc
     3901 cgccgcgccc gttgttcggc ctgccccgcg tggtgtccaa ccaggacgac atcgcattcc
     3961 tgctcgacac aatcgacgcg cacgagaatg gattgaccct gtgcaccggc tcgctgggcg
     4021 ccggcgcaac gaacgacctg cccgcgatcg ccacgcgctt cgccggacgg acacacttcg
     4081 tgcacctccg gaacgtgtcc aaggaacccg atgggtcgtt ccaggaagcc gaccacctgg
     4141 acggcgatgt cgatatggtc gcggtcgtca ccgcgatgct ggcggaacaa caccgccgcc
     4201 gcgacaacgg ggatgcggac tggcgcatcc cgatgcgtcc ggatcacggc cacgaactac
     4261 tggacgacgg ccagcgaaaa acccaccccg gctatccgct ggtcggacgt ctgcgcgggc
     4321 tcgcggaact gcgaggcgtc atgaccgcag tcgcgtcgtt acgcaagtat cccgtgtaat
     4381 accaatcgcc cttgatgttg tcccatcggc agcaccgagc aaccgtcatg gtgagcgcag
     4441 gctcgccatc catgcctttg tttccgctcg taaaaggctt ggataccggc atgcgccggc
     4501 atgacggatg gggtcaaccg aggagtctgc atcaatgccg attggtataa cggccgaacc
     4561 acgctcggcc gttacaaatg caacttaccc gaccacctcc gccacatgct cggcggtaaa
     4621 gccgaagaac ttcatcaccg cgggcccggg tgcggattcc ccgaaccggt cgataccgac
     4681 aaccgccccg tccagcccga catacttgta ccaacccatg gtgctgcccg cttccaccga
     4741 tacgcgccga accccaggcg gcagcaccga atcccgccac gcc
//
LOCUS       DATAVD010000920         3859 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1017153, whole genome shotgun sequence.
ACCESSION   DATAVD010000920 DATAVD010000000
VERSION     DATAVD010000920.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3859
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1017153"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..415)
                     /locus_tag="VHX39_17710"
     CDS             complement(<1..415)
                     /locus_tag="VHX39_17710"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422978.1"
                     /note="with component II, the glutamine amidotransferase,
                     catalyzes the formation of anthranilate from chorismate
                     and glutamine; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HEX3993011.1"
                     /translation="MNVTLAPGYAEFRSAYDAGRGSLVWRRGVADLETPVAAYLKLAH
                     GKPNAFLLESVEGGTTRGRYSVIGMAPDLIWRCENGRAAINRSVHSAPHAFVPEARPP
                     LDSLRSLINETRLDVPGNLPPMAGGLVGYLGYDMVR"
     gene            complement(432..2327)
                     /locus_tag="VHX39_17715"
     CDS             complement(432..2327)
                     /locus_tag="VHX39_17715"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEX3993012.1"
                     /translation="MRRYVETWYVRAFFLIMVASFVLWGVGDMLRMVTTTTWVAKVGN
                     TTIEAPQLESEYRRDLSVMTRNLPAGQEPSARLRREVGEQALQSLIGQAATSQELQNL
                     RIAVPDAVLVDTTHKLPAFRDANGQFDKARLDAVLRNQNMTEAGFISMMRSEMAQRQL
                     LDAVAAGARVPHSEAAASYAARFEKRSADMAAFPIANVPEPPIPDEPAARRWYDTHPD
                     LYATPEYRRVKVIVLSPLTLASEVSVTDQEVQAAYEAHKADYTTISKRSAQVISTTDE
                     AKATALADQWRAGADWAAMQAAAKTAGAAAIEQNDATETQFPDPDLAKAVFATPVDKV
                     PPPIKGVLGWFVIRVVKAVQGGVQSLDEVKDPLRQRLATEKALGLVYDKANKLDGVLG
                     QGTALDALPPEAGVAAATVTLDQNGDTPQDRPAALPGESEIHAAITAAAFAAQKGDPP
                     QLTEVQTPSVGGSGYFALSLDDITPAGEKPFETVHDAVVQDWRADQRRHSAEAAATAM
                     LDAIKAGKPFSDAARDAGVTPSLSPLVTRTQPDPAMPREVQQVLFSLKKGEPTKVEAP
                     NGFLIATVVEIVAPDPAADPTRYQQVRAVESRGLADDMSSAFSEALRLRANPSINQAN
                     VDQIVQP"
     gene            2496..3668
                     /locus_tag="VHX39_17720"
     CDS             2496..3668
                     /locus_tag="VHX39_17720"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3993013.1"
                     /translation="MHTIVQPASAASAPDRARSLLPLLDTHGPEIDRRREVTPEVVDA
                     LVEQDMLRLLLPRSLGGQELHLLEYCRTTETIGFGDASTGWFVNQSNVSAATSAASMP
                     HAAAASVFNGPRTGLAWGARHNDSACIRVEGGYRLTGTWSFASGGRHTKYLGAHSAVQ
                     NPDGTPHMRYGRQDDRSFVFLRAQARIIDDWHVLGLRGTGSDSYAVEDLFVPDDHAPA
                     RDVIEERRESGPLYPIGSTLLYAVGFCGVTLGLARRMLETFLDLVRVRHSKFSINAMA
                     DNNAVQSQIGLLEARLSAARAFLHEAVGQTYEASSAGVLGMNERMRLRLATTHGMNEA
                     TDVSIACYRAAGTQAIMNRAPFERRLRDALTASQHAQAMPGHIETVGRWIIGGGAK"
BASE COUNT          665 a         1172 c         1301 g          721 t
ORIGIN      
        1 gccggaccat gtcgtaacca agataaccaa caagaccgcc cgccatcggc ggcaggttgc
       61 cgggaacatc aagtcttgtc tcgttgatca ggctgcgcag actgtccaac ggcggccgcg
      121 cctccggcac gaaagcgtgc ggcgcagagt gcacggaacg attgatcgcc gcgcggccgt
      181 tctcgcagcg ccagatcagg tccggcgcca tgccgatcac cgaatagcgg ccgcgcgtgg
      241 tgccgccctc gacgctttcc aacagaaacg cgttgggctt gccatgcgcc agcttcagat
      301 aggctgcgac cggtgtttcc agatcggcga cgccgcgacg ccagaccagg ctgccccgtc
      361 cggcatcgta ggcggaacgg aattcggcat agcccggtgc gagagtgacg ttcatacctg
      421 gtctcggtgg ctcacggttg cacgatctga tcgacgttgg cctgattgat gctcgggttg
      481 gcgcgcagac gcaacgcctc ggagaacgcc gaactcatgt cgtccgccag gccgcgcgat
      541 tcgaccgcgc gcacctgttg atagcgcgtt ggatcagcag cggggtcggg ggcgacgatc
      601 tcgaccacgg tcgcgatcag aaagccattc ggggcttcga ctttggtggg ctcgcccttt
      661 ttcaggctga acagcacctg ctgcacctca cgcggcattg ccgggtcggg ctgggtgcgg
      721 gtcaccagag gagacaggct cggtgttacg ccggcatcac gggcggcatc ggagaacggc
      781 ttgcctgctt tgatggcatc cagcatcgcc gtggctgcag cctcggccga gtggcgacgc
      841 tggtcggcgc gccagtcctg caccacggcg tcatgcaccg tctcgaacgg cttttcaccg
      901 gccggggtga tgtcgtccag cgacaatgcg aaatagcccg aaccgcccac ggaaggtgtc
      961 tgcacctcgg tcaattgcgg tggatcgcct ttttgcgcag caaacgcggc ggctgtgatg
     1021 gcagcgtgga tttccgattc accgggaagc gccgccggcc ggtcctgcgg tgtgtcgccg
     1081 ttctgatcca gcgtgaccgt cgcggcagcc acgccggctt ccggcggcaa tgcgtcgagc
     1141 gcggtgccct ggcccaatac gccatcgagc ttgttcgcct tgtcgtaaac cagaccaagc
     1201 gccttttccg tggccaggcg ttgccgcaac ggatccttca cctcatcgag cgattgcacg
     1261 ccaccctgca ccgccttgac cacacggatg acgaaccagc caagcactcc tttgatgggc
     1321 ggcggcactt tgtccaccgg cgtcgcgaac accgctttgg cgaggtccgg atcagggaac
     1381 tgagtctcgg tcgcatcatt ctgctcgatt gccgccgcgc cggcggtctt cgcagccgcc
     1441 tgcatcgcgg cccaatccgc accggcacgc cactgatccg ccagcgcggt cgcctttgct
     1501 tcatcggtcg tggaaatcac ctgcgccgag cgcttcgaaa tcgtcgtata gtcagccttg
     1561 tgcgcttcgt atgccgcctg gacctcctgg tcggtcacgc tgacctccga cgccagggtc
     1621 aaaggcgaca gcacgatgac cttcacgcgc cgatactcgg gcgtcgcgta caggtcgggg
     1681 tgggtatcgt accagcgccg cgcggccggt tcgtccggga tcggcggctc gggcacattc
     1741 gcaatcggaa atgcggccat gtccgccgag cgtttttcga atctcgcggc atagcttgcg
     1801 gcagcctcgg agtggggcac gcgtgcgccc gccgcaacgg cgtccagtag ctggcgttgc
     1861 gccatctcac tgcgcatcat cgaaatgaag ccggcctcgg tcatgttctg gttgcgcagc
     1921 acggcgtcga gcctggcttt gtcgaactgg ccgttggcgt cgcggaatgc aggcagttta
     1981 tgggtggtat ccaccagaac ggcatcgggg actgcaatgc gcaggttttg cagttcctgg
     2041 ctcgtcgctg cctggccaat caggctctgc aacgcctgtt ccccgacctc ccggcgcagc
     2101 ctggccgagg gttcctggcc tgctggcagg ttgcgggtca tgacagacag gtcacgccga
     2161 tactcggatt ccaactgggg tgcctcgatc gtggtgttgc cgaccttggc aacccaggtc
     2221 gtggtggtga ccatgcgcaa catgtcgccg acaccccaga ggacgaagga ggctaccatg
     2281 atcaggaaga aggcgcggac gtaccacgtc tccacgtagc gacgcatcga agtaatcata
     2341 ccgagtgtcc cagcttcccc gctcgcctgg ccacggtata cgaggcacgc cggcggtttg
     2401 ccagcgcggg ccgacgcgcg ccgcggtccg ttggattgac gggtttccag accggccgtt
     2461 atgggtcagc cgacaggttt tttgaggaaa acgtgatgca tacgatcgtc cagccagcga
     2521 gcgccgcaag tgcgccggac cgcgcccgct ccttgctgcc gctgctggac acgcacgggc
     2581 cggagatcga ccggcggcgc gaggtgacgc ccgaagtggt ggacgctctg gtcgagcagg
     2641 acatgctgcg tctgttgttg cctcgcagcc tgggcgggca ggaactgcat ttgctggaat
     2701 attgtcggac gaccgagacg atcgggttcg gtgacgccag caccggctgg ttcgtcaatc
     2761 agtcgaatgt ttcggcagcg acctcggccg cttcgatgcc gcatgcggcg gcggcttcgg
     2821 tgttcaacgg gccacggacg ggattggcat ggggggctcg gcacaatgac agcgcgtgca
     2881 tccgggttga gggcggttac cggctgaccg gcacctggag ctttgccagc ggcggccgcc
     2941 acacgaagta tctgggcgca cacagcgcgg tgcaaaatcc ggacggcacg ccgcatatgc
     3001 gctacggccg gcaggatgac cgcagctttg tattcttgcg tgcacaggcg cggattatcg
     3061 atgactggca tgtactgggg ttgcggggca ccggcagcga ctcctacgcg gtggaggacc
     3121 tgttcgtgcc ggacgatcat gcgcccgcgc gggatgtgat cgaggagcgg cgggagagcg
     3181 ggccgctgta tccgattggc tcgacgctgc tttatgctgt cggcttttgt ggggtgactc
     3241 tgggcctggc gcggcggatg ctggaaactt tcttggattt ggtacgggtc aggcacagca
     3301 agttttcgat caacgcgatg gcggacaaca acgcagtgca gtcgcagatt gggctgctgg
     3361 aggcacggct gtcggctgcg cgggcgtttc tgcatgaggc ggttgggcag acgtatgagg
     3421 cgtcctcggc gggggtgctg gggatgaatg aacggatgcg gttgcggttg gcgacaacgc
     3481 acgggatgaa tgaggcaacc gatgtgtcga ttgcgtgcta ccgcgcagcg gggacacagg
     3541 cgatcatgaa ccgggcaccg ttcgagcgcc ggctccgcga cgcgctgacc gccagtcagc
     3601 atgcccaggc catgcctggg catatcgaga cggtggggcg gtggattatt gggggtgggg
     3661 cgaagtgagt ggggggctgg aatttgatgc acaattcaag aatcgtaaaa cggaaaccag
     3721 gccgtcggcg aaactttcca tttccgcttc gaatatccgt tgtgtggtgc cgacgtaaga
     3781 gcgtcctgca aagggtaaga tatcggacga aaaatcgggc caatgaaaac agacggttgt
     3841 ccgtccagca agtcagtcc
//
LOCUS       DATAVD010000921         4842 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3250211, whole genome shotgun sequence.
ACCESSION   DATAVD010000921 DATAVD010000000
VERSION     DATAVD010000921.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4842
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3250211"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1141
                     /locus_tag="VHX39_17725"
     CDS             <1..1141
                     /locus_tag="VHX39_17725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEX3993014.1"
                     /translation="MNSPLTNPYSIDILTANVAQAQTLAAQLKQLSSVASVLTIDSFV
                     PQDQKQKLALVADAADILAPTLLPPDAAPAVTPERIRNAANSALEAIDPALATLPPHH
                     PLATVAGDLRRLVVSPDQTLLVTNTALTRFLPEQLDRLSTALDAQPVTLKSVPPDIAN
                     DWVLADGRARVQVLPQSASRTSAGLREFVDQVTGVAPTAGGTAVTIEATSATIIDAFR
                     LAAISAVAAIAVILVFALRRLRDAAYVLAPLLLSAAMTVLVMVLLPLPLNFANIIALP
                     LLLGVGVSFNIYFVMNWRAGRREMLASATARAVMFSALTTGTSFGSLALSGHPGTASM
                     GLLLLISLGSTLVASLVFVPALLAAISRPAPERGSGTKWVASRRH"
     gene            complement(1138..2148)
                     /locus_tag="VHX39_17730"
     CDS             complement(1138..2148)
                     /locus_tag="VHX39_17730"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEX3993015.1"
                     /translation="MAAANPAISIPGLASVKPSIVGAFVLSGLALAIAAVLLFGRLDL
                     FSTEQQAVVFFPGSISGLAVGAPVTFRGVQVGSVRRIWIRLDGKNLTARVAVTLELNR
                     DAMRMADGTLPDDQFSLPHMLQAGLVAQLDTSSLITGQLQIDLDLRPDLKRVSARSDL
                     GMPEIPAVVSPFESIKTQIEQLQVGQLVTTAQHTLESIQRVSDQLDGRLGPLMDSVQK
                     TSDGARYTLQITTAAIQKIQAQSSQTLGDFDQLAIEGKRQLNDRGTDLSRLLADADHT
                     VHEVDSLSGSLNDMLSPRSQMRGNFDAALRDLAATASSLREFSHEIDRDPTLLLTHGN
                     RP"
     gene            complement(2135..2938)
                     /locus_tag="VHX39_17735"
     CDS             complement(2135..2938)
                     /locus_tag="VHX39_17735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008851114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3993016.1"
                     /translation="MDTAIDCPKLLVQELTVGYGEAAVQHNLSFAVRPGSIFAIMGPS
                     GCGKSTVLKSLIGLRRPTAGTIEVNGEDYWAAGELRRAELDQQFGMLFQSDALWSAMS
                     IAENVALPLRMFTQLDNASIDALVRLKLALVGLPRAGERMPAELSGGMRKRAALARAL
                     SLDPEILFFDEPSAGLDPVNAARLDDLILELRDGFNATVVLVSHELSSLFAICDDGVF
                     LDAETKTAIAHGSPKALRDNCSHPSVRSFMHRDGSFGGGNTKGGQNGGG"
     gene            complement(2942..4015)
                     /locus_tag="VHX39_17740"
     CDS             complement(2942..4015)
                     /locus_tag="VHX39_17740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014626382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3993017.1"
                     /translation="MIVLTGDWIARQTGVVACATEQILASKRPRALLFDARRLGRWDS
                     ALIVFLWELQAQAAKFEIEFNQDGLPEPACKLIALASIEVMPETKHAASQGLLAWTGR
                     YVMAGWSEVVEILILVGSTMLRTGPAFSGRGGLRRLDVLDCAWDAGIAAVPIVTVVNV
                     LVGGILAFVGAAQLRRFGAGIYVADLIGVAVVREMAAVMTAIIMSGRTGGAYAAQIAT
                     MQGNEEIDAIRVAGIPVFDYLILPRITALTFMMPILYLYGCAVGVLGGAVVAKLTIGL
                     STTTFLDEMRTAVDGRQFLLGLTKSVVFGAVIAFTGCRIGLRSGRSAADVGKAATSAV
                     VVGIVCVIALDALFAVCANRLGI"
     gene            4498..4740
                     /locus_tag="VHX39_17745"
     CDS             4498..4740
                     /locus_tag="VHX39_17745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993018.1"
                     /translation="MNFTNFSAALITLSLLVAAPAFAQNTPAQKQPTQEGGGGYAPCG
                     LPFNATPTAQPGCRQQTQSLVPSATQGAAEANNSHK"
BASE COUNT          985 a         1557 c         1409 g          891 t
ORIGIN      
        1 gatgaattca ccgctgacca atccttacag catcgacatc ctgaccgcga acgtggctca
       61 ggcgcagaca ctcgcggctc aattgaagca attgtccagc gttgcgagcg ttctcacgat
      121 cgacagcttc gtgccgcagg atcagaaaca aaaactcgcc ctggtggcgg atgctgcgga
      181 tattctggca ccgacgctgc tgccgcccga tgccgcgccg gcggtgacac cggaacggat
      241 tcgcaatgcg gcaaactccg cactcgaggc gatcgatccc gcgctcgcaa cgttgccgcc
      301 ccaccatccg ctggccacgg tcgccggtga tctgcggcgg cttgttgtca gtccggacca
      361 aacgctgttg gtaaccaata ctgctctgac ccgattcttg ccggaacaac tcgatcgtct
      421 gagcacggca ctcgatgcgc aacctgtcac tctgaaatcg gtcccgccgg atatagcgaa
      481 cgattgggtg ctggctgacg gcagggcccg tgttcaggtg ctgcctcagt ctgcttcacg
      541 gaccagcgcg ggattgcgcg aattcgttga ccaggtcacc ggcgtggcac cgactgcggg
      601 cggcaccgcc gtaacgatcg aggcgaccag tgccaccatc atcgatgcat tccgcctggc
      661 cgccatctcc gcggtcgcgg caatcgcagt gatcctggtg tttgcactgc gccgtttacg
      721 cgatgcagcg tacgtgctgg ccccgctgct gctgtccgca gcaatgacag ttctggtcat
      781 ggtattgctg ccgctgccgc tgaatttcgc caacatcatc gcgctgcctt tgctgttggg
      841 cgtcggcgta tcgttcaaca tctatttcgt catgaactgg cgagccgggc ggcgtgagat
      901 gcttgcctca gcaaccgcgc gcgcggtgat gttctcggcc ctgaccaccg gaacatcgtt
      961 cggctcgctg gcgttatcag gacaccccgg caccgcgtcg atgggcctgc tgctcctgat
     1021 cagtctgggc tccacgttgg tggcgagttt ggtcttcgtc ccggcgttac tcgctgcgat
     1081 atcgagaccc gcgccggagc gcggatcggg cacgaaatgg gtggcatcgc ggcgtcatta
     1141 aggccggttc ccgtgggtca gcagaagcgt agggtcacga tcgatttcgt gactgaactc
     1201 tcgcagcgaa ctggctgtcg cagccagatc gcgaagcgcc gcgtcgaaat tgccgcgcat
     1261 ctgcgatcga ggcgataaca tgtcgttcag cgagccggac agcgaatcca cctcgtgcac
     1321 ggtgtggtcg gcgtccgcca aaaggcgact gaggtcagtg ccgcggtcgt tcaactgccg
     1381 cttcccctcg atcgccaact gatcgaagtc gcccagagtt tgactggatt gcgcctggat
     1441 tttctgaatc gcggcggtgg tgatctgcaa agtataccgg gccccgtcgg aggttttttg
     1501 cacgctgtcc atgagcggtc caagcctgcc atcaagctga tcggaaacgc gctgaatgct
     1561 ctcgagggta tgttgcgcag tcgttaccag ctggcccacc tggagttgtt caatctgcgt
     1621 cttgatcgac tcgaatggcg aaacgaccgc agggatttcg ggcatgccga gatcactcct
     1681 ggccgacacc ctcttgaggt ccggtcgcag gtcgaggtcg atctgaagtt gcccggtaat
     1741 gaggcttgag gtgtcaagtt gtgccacgag accggcctgc agcatgtgcg gcaggctgaa
     1801 ctgatcgtca ggcagcgtac cgtcggccat tcgcatggca tcccgattca attcaagcgt
     1861 gacagcaacc cgggcagtca aattcttgcc atcgagacgg atccaaatac ggcgcaccga
     1921 acccacctga acaccgcgaa aggtaaccgg cgcaccgacc gcaagaccgg agatggaacc
     1981 tggaaagaag acgaccgcct gctgctccgt gctgaacaga tcgaggcgcc cgaacagcag
     2041 gaccgccgca attgcaagcg ccaggccact tagtacaaag gcgcctacga tcgacggttt
     2101 gaccgatgcc aggccgggta tggaaattgc cggattagcc gccgccattt tgacctccct
     2161 tggtattgcc tccgccgaac gagccatcac gatgcatgaa cgagcgcacc gacggatgcg
     2221 aacagttgtc gcgcaaagct ttaggcgaac cgtgcgcgat ggcagtcttc gtttcggcgt
     2281 cgagaaacac gccgtcgtcg caaatggcga acaggctcga cagctcgtga ctgaccagca
     2341 cgacggtcgc attaaagccg tcacgcagtt ccagaataag gtcgtcgagc cgcgccgcat
     2401 tgaccggatc aaggccggcc gagggttcgt caaagaacag gatctccggg tcgagcgaaa
     2461 gcgcacgtgc cagcgcagct cgcttgcgca tgccaccgct gagttccgca ggcattcgct
     2521 ccccggcgcg cggcagcccg accagggcca gcttcagccg gaccagcgca tcgattgagg
     2581 cattgtccaa ttgtgtgaac attcgcagcg gcaacgccac attttcggcg atcgacatgg
     2641 cgctccacag cgcatcgctc tgaaacagca tcccgaattg ctggtccaac tcggctcgcc
     2701 gcaactcgcc ggcagcccaa taatcttcac cattcacctc gatcgtgccg gcagttggcc
     2761 tgcgcagtcc gatgagtgat ttcagcaccg tgctcttgcc gcaaccgctg ggacccatga
     2821 tcgcgaaaat cgatccaggt ctgaccgcga acgaaagatt gtgctgcacg gccgcctcgc
     2881 catagccgac agtcagttcc tgcacgagca gcttcgggca atcgatggcg gtgtccatgc
     2941 gtcagatccc caaccggttt gcgcaaaccg cgaacagagc gtccagcgcg atcacacaga
     3001 cgatcccgac cacgacggca ctcgttgcag ctttgcccac gtcggcggcg ctacgcccgg
     3061 atcgcaggcc gatgcggcac ccggtgaagg cgatgaccgc accgaacacg acgcttttgg
     3121 tgaggcccaa caaaaattgg cggccgtcga ccgcggtgcg catttcgtcg aggaaagtcg
     3181 ttgtgctgag tccaattgtc agtttcgcaa cgacggcgcc gccgagcacg ccaacggcgc
     3241 aaccataaag gtagagaatc ggcatcatga aggtgagcgc ggtgatcctc ggaagaatga
     3301 gataatcgaa taccggaatg ccggccaccc gaattgcatc gatctcctcg ttgccttgca
     3361 tcgtggcgat ctgcgcggca taggcgcctc cggtgcgccc agacatgatg attgccgtca
     3421 tcaccgcagc catttctcgc accacggcga cgccaatcag atctgcgaca tagatgcccg
     3481 caccgaatcg ccgcaattga gcggcaccca cgaaggccag gatgccgccg accaacacat
     3541 tcacgacagt aacgatcgga acggcggcga tcccggcgtc ccacgcgcaa tccagcacgt
     3601 ccaggcgacg caaacccccg cgaccgctga atgccggccc ggtacgcaac atcgtgctgc
     3661 cgacgagaat gaggatctca accacctccg accaacccgc catcacgtag cgcccggtcc
     3721 aggcgagcag gccttgcgac gccgcatgct tcgtctccgg cataacctcg atcgatgcca
     3781 acgcaatcag tttgcacgct ggttccggca gcccgtcctg gttgaactcg atctcgaact
     3841 tcgcagcctg tgcctgaagt tcccagagaa agacgatcag tgcactgtcc cagcgtccga
     3901 gccgcctggc atcgaacaac agcgcgcgcg ggcgtttact tgccaggatc tgctcggtcg
     3961 cgcacgccac gacgccggtc tggcgggcga tccaatcgcc ggtcagaacg atcaccagat
     4021 cagatccctg ggcgcgcacc gaccatcggg cagcctcaac agaagcggtc gctggttccg
     4081 ctacagctcc ggccgtcgcg gcgtcaaagc caggatcaac caggtccgat tcctgatccg
     4141 ccgaaacgcg gccattccgg gcaacatcat tctcgggttc cggccttcgg agtcgagcgt
     4201 gctgtgtccc gtcgttccgc atcaccgctc cttacaggcc tgaatgagca aagcagctag
     4261 atgggaacgg tcgccggaaa ttaaaatccc attttgtcat tcgttttggg ggagaccggt
     4321 gagccatcgt ccgacgcatc gggtcgcacc atcgaatgat cgcttgcgag ccttgcgtca
     4381 tcagtcacgt gattggtcgt gcgatccggg aacgatcgtg cagcgggaaa agactgtgcc
     4441 gtcgagaccg cctagatatc atcgtgctaa ctcaccagcc cgcaaaaagg aatccccatg
     4501 aacttcacga acttttccgc cgcattgata actctcagcc tgctcgttgc ggcaccggct
     4561 ttcgcgcaga atacccccgc gcagaagcaa ccgacccagg aaggtggcgg cggctatgcc
     4621 ccttgcggtc tgcccttcaa tgccactccc accgcgcagc ccggctgcag gcagcagacc
     4681 cagagcctgg tcccgtcggc cacccagggc gcagccgaag ccaacaacag ccacaagtaa
     4741 gcgcgatgcc gttgtttgca tcccgggtgt caccggacat ccgggatgca atgcggtgat
     4801 gctcgttgaa gacgaaaacc ttagttggcg cggggccatc at
//
LOCUS       DATAVD010000922         6837 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3626199, whole genome shotgun sequence.
ACCESSION   DATAVD010000922 DATAVD010000000
VERSION     DATAVD010000922.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6837
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3626199"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..739)
                     /locus_tag="VHX39_17750"
     CDS             complement(<1..739)
                     /locus_tag="VHX39_17750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3993019.1"
                     /translation="MIGIIVLCFFLLQLVPGNAADVLAAQNGSATAQTMTALRQRLGL
                     DQPMLVQLVTYLIHLAHLDLGYSAQFAMPVSQLILERLPNTLLLMLSALGMALVVGIL
                     AGWVMAIFAGRWPDRVLQVVVLLFYSTPGFWIGLMAIVLFSVKLGWLPSNGSMTVGEP
                     LSGLHLLADRASYLVLPSLSLSPFFIAVYARLTRATMLEMQGQDFMRTAAAKGLHPIR
                     VQIRHALRNALIPVTTMAGIHLGNLLGG"
     gene            1000..1167
                     /locus_tag="VHX39_17755"
     CDS             1000..1167
                     /locus_tag="VHX39_17755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993020.1"
                     /translation="MIGVYTPLVVCRSNAVGPRLIDKIDNESAARKALPIDHAAQSHR
                     HTVLAISHGST"
     gene            1300..1632
                     /locus_tag="VHX39_17760"
     CDS             1300..1632
                     /locus_tag="VHX39_17760"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3993021.1"
                     /translation="MPDLLLLDPLIAAFADAGAAIMTTAPAARPGPVEKLVSAGVAVC
                     AGSDGIRDNWVPYGNADMPKRVMFVGPRSNFRRDDELSIALDVVTTDGAKALGLPDYG
                     LTTRCGGM"
     gene            complement(1743..2720)
                     /locus_tag="VHX39_17765"
     CDS             complement(1743..2720)
                     /locus_tag="VHX39_17765"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003619194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3993022.1"
                     /translation="MHIKFSVAYEGNLPPEMLLGLAQAADRAGVNTLWAASHLFQREP
                     IVNASMVLANTTNLTAALMAMSPYTMHPVHIAMAAAALDEWFPGRVTLSFGVGAPRDL
                     EAVGLNAGKPLQAISESIAIARALLAGEVVRFDGQRFRVTNRGLSSGERSVPIILAAS
                     GPKMLELAGAEADGVLISAAASPAFIKWALRHVAVGEAKGGRRVHKAALVYSSVADDG
                     RGARDQLRHSLAFVLRGGHHKRNLDMAGTQMDQAALARAFADENWATVEKLVDDTVFD
                     NHSASGTPEQVRRAFSAYQSAGLDEIVLAGVTTGTDLPRLLRAASPTSD"
     gene            complement(2746..3762)
                     /locus_tag="VHX39_17770"
     CDS             complement(2746..3762)
                     /locus_tag="VHX39_17770"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003619196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03619 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEX3993023.1"
                     /translation="MKKLIVSAGLPTCMEGLTYPIPFSDPSNLLRIALHAERLGYHSV
                     WGNDHMTTQNYVRAEFPTPPRFWEPLITYAWLAAATTTLRFGTGILVLPMRRDIVVTA
                     KQIATLDHLSGGRLEIGVGVGAYREEFDALWPDSPAHRGEMMEEGVTALRLLFSQREA
                     SFAGKYYAFRDVELSPKPLQAHMPVYYGGNSPNHIRRVAQGADGWIPAAMPPDQLRPL
                     VVRLHEAAAGFGRDPAGIEVAPQFVVHMGQTNEAAVARFKQSQMHKHLVSLGKSTLKN
                     QAKLAMEDINLIGGVDQVIERATRLKEAGVTHFLGLYFAASDVQELLDQMQFFAEEVT
                     PKII"
     gene            complement(3817..4950)
                     /locus_tag="VHX39_17775"
     CDS             complement(3817..4950)
                     /locus_tag="VHX39_17775"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX3993024.1"
                     /translation="MLVPRPASSTGSGLWRYGDLLPADASGAVSLGEGFTPLLPLPRA
                     AAVLGLGHLLIKDETRQPTGSFKDRLACVGVSAARALGTRVIVSSSSGNAGAATAAYA
                     ARAGLACVIFTFRGASETLVAQMRALGAMVVFAEHKDDRFSLVQRGIQRFGWFATSPF
                     SDPVTGSNPIAIEGYKTLAYEIAEAMDWDVPDWCVLPVCYGDALAAIGRGFEDMVALG
                     WTRRVPRLVAAEVSGSLGAALASGGDALPAMHLNRTTVATSIGAARGTFQALHALRAS
                     AGRAVTVADCALLQWQDFLARQEGLWIEPSSAAALAAIEMLVAEGTIRPDHRVVAIAT
                     AGGLKDPSVTARRLGNVPVVPADLDTALTIIDNTYGTRLAGEV"
     gene            complement(5919..6806)
                     /locus_tag="VHX39_17780"
     CDS             complement(5919..6806)
                     /locus_tag="VHX39_17780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993025.1"
                     /translation="MATFKAMNRSAGMLYRAQKFILIGTVAFVVCGMVASTPRFGLDD
                     PDVIGVQNGLQVFQLLGLLAAIYCLAKARPIPATAFQITSLTAAVLLTLFNFHGIAVI
                     IAAMCLLRGSRGALQMKAAGTIVGAIAVQAVVAPLVFAKISPFLLPLDAAAAGFLLST
                     ILPGASWSGTVINSINGHSVVVLAGCSSFHNLSLATLCWVTITMAHRPYWTRHDLWIG
                     VWAGFIQIAFNVARLLLISISEPMFHFWHDGVGRHYFAAAATFSATLFVAMGVLRADR
                     KASAESSEVPISPVASFGD"
BASE COUNT         1330 a         2147 c         2148 g         1212 t
ORIGIN      
        1 cgccgcccag caggttgccc aggtggatgc ccgccatggt tgtcaccggg atgagggcgt
       61 tgcggagggc gtgcctgatc tgcaccctga tcggatgcag ccccttggcg gccgcggtcc
      121 gcataaaatc ctggccctgc atttccagca tcgtcgcccg ggtcagcctt gcgtagacgg
      181 cgatgaagaa cggcgacagt gaaagcgacg gcagcacgag gtaggatgcc cggtccgcca
      241 gcagatgaag gcccgacagc ggctcgccca cggtcatgct gccgttggat ggcagccagc
      301 cgagcttcac cgagaacagg acgatcgcca tgagcccgat ccagaagccg ggggtcgagt
      361 agaacagcag caccacgacc tgcagcaccc ggtccggcca gcgcccggcg aagatcgcca
      421 tgacccagcc ggccaggatg cccacgacca gcgccatgcc cagcgccgaa agcatcagca
      481 gcagcgtgtt cggcagcctt tccaggatca gctgcgatac cggcatggcg aactgcgccg
      541 aatagccgag gtccagatgc gcgagatgga tcaggtaggt gaccaactgc accagcatcg
      601 gctgatccag cccgaggcgc tgccgcagcg cggtcatggt ctgcgcggtc gctgacccgt
      661 tctgtgcagc caggacgtcg gcggcgttgc ccggcaccag ttgcaggaga aagaagcaga
      721 gcacgatgat gccgatcatc gtgggcactg ccttcgttat cgtgcgtctc agcgctgttc
      781 caatacgtcg catcgcgctc agtccaatct cctttccccg ttcagaggtc tctggttcgg
      841 gacccggcgg tggcggggca cgcaagaact atgcctcttg gcgtgaggcg tgcgtcgagg
      901 cgatcgggaa cggtcgttcg agatgctgtc agtggcatct cttccgcggc tgttgccatc
      961 gtctggtcac acagcgagca tgttgcctaa cgaaggcgca tgatcggcgt atatacgccg
     1021 ttggtggttt gccgctccaa tgctgtggga ccgcgcctga tcgacaagat cgataatgag
     1081 agcgcggcgc ggaaggcgct tccgatcgac cacgctgcgc agtcccaccg gcacacggtg
     1141 ctggcgattt cccacggcag cacttgatcc gcatccatgt ggacgtcgat gcggactgtc
     1201 gcgtgaccgg tatcgagatg gtaatggcga cgcgagacgc cttggccgat gcggtcacca
     1261 ccggccttgt agcttttccg cagagtggcc tgcctgggta tgcccgatct gttgctgttg
     1321 gatccgctga tcgcggcatt cgccgatgcc ggggccgcga tcatgacgac cgcccctgcc
     1381 gctcggccgg ggccggttga gaagttggta tcggccggcg ttgctgtttg cgcggggtcg
     1441 gacggcattc gcgacaactg ggttccatac ggcaacgcag acatgccgaa acgcgtcatg
     1501 ttcgttgggc cgcgcagcaa ctttcgccgt gacgacgaat tgagcatcgc cctcgacgtt
     1561 gtcacaacgg acggggccaa ggcgcttggt ttaccggact atggcctgac gacgagatgc
     1621 ggcgggatgt gatgctcgtc gcggctgaaa ccatcgccga ggccgtggcg caacggcaag
     1681 gcaagctgac ggtgataaag caacgcagcg tcatcgctcg ttacgattgt tttgctagcg
     1741 gatcagtctg acgtgggcga cgccgcgcgc agaagccgcg gcagatcggt gccggtcgtc
     1801 acgccggcca gcacgatttc gtccagaccc gccgattgat aggcactgaa cgcgcgccgc
     1861 acttgttcgg gggttccact tgccgagtgg ttgtcgaata ccgtgtcatc gaccagtttc
     1921 tcgaccgtgg cccaattttc atcggcgaat gcgcgggcca gcgcggcctg atccatttgg
     1981 gttcccgcca tatccagatt gcgtttgtgg tggccgccgc gcagtacgaa ggccagacta
     2041 tgccgcagtt ggtcgcgcgc gccgcgccca tcgtccgcca ccgaactata gaccaacgca
     2101 gctttatgga cccggcggcc gcctttcgcc tcgccgacgg cgacatgccg taacgcccat
     2161 tttatgaacg cgggcgacgc ggccgcactg atcaggactc cgtccgcttc ggcccccgcc
     2221 aactccagca tcttcggacc cgaagccgcc aggataatgg gaacgcttcg ttcgcctgac
     2281 gataatcctc ggtttgtcac gcgaaatcgt tgtccgtcga agcgcactac ctcaccggcc
     2341 agcaatgcgc gcgcgatggc gatgctctca ctgatggcct gcaacggttt gccggcgttc
     2401 agcccgaccg cctccagatc acgtggcgcg ccgacaccga aacttagggt cacgcggcct
     2461 ggaaaccact cgtctaacgc cgccgccgcc attgcgatgt gcacgggatg catggtgtag
     2521 gggctcatgg ccatcagcgc ggcagtcagg ttggtggtat tggccaggac catggacgca
     2581 ttcacgatcg gttcgcgttg gaagagatgc gaggcggccc ataacgtgtt tacccccgcc
     2641 cgatcggccg cctgagcgag accgagcagc atttccggcg gcaggttgcc ttcataggcg
     2701 acgctgaact tgatgtgcac gctatggttg ctccaacgga ggacgtcaga tgatcttggg
     2761 cgtgacctcc tcggcaaaga actgcatctg gtcgagcaat tcctgcacgt cgctggcggc
     2821 aaagtacagc ccgaggaaat gggtgacgcc ggcttccttc aatcgggtgg cacgctcgat
     2881 cacctgatca acgccgccga tcaggttgat atcctccatc gccagcttcg cctggttttt
     2941 cagcgtcgat ttgccaagcg agacgaggtg cttatgcatc tggctttgct tgaaccgcgc
     3001 cacggctgcc tcattcgtct ggcccatgtg gacgacgaac tgcggcgcga cctcgatgcc
     3061 ggcgggatcg cgcccgaagc cggcggcagc ctcgtgcaat ctaaccacca gcgggcgcaa
     3121 ctggtctggt ggcatggcgg cgggaatcca gccatccgcc ccctgcgcca cacgcctgat
     3181 gtggttgggg ctgttgccgc cgtagtaaac cggcatgtgc gcctgcagcg gcttgggcga
     3241 taattcgaca tcgcggaagg cgtaatattt gccggcaaag ctggcctccc gctggctgaa
     3301 cagaagccgc agggcggtca cgccctcctc catcatctca ccgcgatgtg ccgggctgtc
     3361 gggccataag gcatcgaatt cctctcgata ggcgccgaca ccgacgccaa tttccagccg
     3421 tccgccactg agatgatcca gcgttgcgat ctgttttgcc gtcaccacga tgtcgcgccg
     3481 catcggcagc accaggatac cggtgccgaa ccgcaacgtc gtcgttgccg ccgccagcca
     3541 ggcgtaggtg atcaacggct cccagaaccg gggtggggtc gggaactccg cgcggacata
     3601 attctgcgtg gtcatatggt cgttgcccca caccgagtgg tagcccaacc gttcggcatg
     3661 cagggcaata cgcagaagat tcgacggatc cgaaaacggg atcgggtagg tcaggccttc
     3721 catgcaggtt ggcagtcccg cgctgacaat cagcttcttc atcggttcct atccattgca
     3781 tagactctca atgttatcgg gccggcacgt ccgacatcac acctcccccg caagccgcgt
     3841 gccataggtg ttgtcgatga tcgtcagcgc ggtatccaga tccgcgggga ccaccggaac
     3901 gttgccgagc cgcctggcgg tcaccgaggg atctttcaat ccgccggcgg tcgcgatggc
     3961 gacaacccga tgatccggcc ggattgtgcc ctcggcaaca agcatctcga tcgcggcaag
     4021 cgcggcggcg gaggacggct cgatccacag accttcctgc cgcgcgagga aatcctgcca
     4081 ctgcaacaat gcacaatcgg caacggtaac ggcccggccg gcgctggccc gcagtgcatg
     4141 aagcgcctgg aaggtgccgc gggccgcacc aatcgaggtt gccaccgttg tccggttcaa
     4201 gtgcatcgcc ggcagcgcat ccccgcccga ggccagtgcc gcgcccagcg accccgatac
     4261 ctcggccgcg accagacgtg gcacgcggcg ggtccaccca agggcgacca tatcttcgaa
     4321 gccgcgcccg atcgcggcca gcgcatcgcc gtagcagacc ggcagcacgc accagtcggg
     4381 cacatcccag tccatggcct cggcgatttc ataagcaagg gtcttgtagc cctcgatcgc
     4441 gatgggatta ctgccggtca ccggatcgga aaatggcgag gtggcgaacc agccaaaccg
     4501 ctgaatcccc cgttgcacaa gcgaaaatcg atcgtccttg tgttcggcga ataccaccat
     4561 ggcacccaac gcgcgcatct gtgccaccag agtctccgac gcgccgcgga aggtgaaaat
     4621 gacgcaagcc agcccagccc gagcggcgta ggcggccgtg gccgcgccgg cgttgccgga
     4681 cgaactggac acgatgaccc gggtacccag tgcccgcgcg gccgaaacgc cgacacaggc
     4741 gaggcggtcc ttgaacgaac cggtcggctg gcgtgtctcg tccttgatga gcagatgccc
     4801 gagtcccagt accgccgcgg cacgcggtag cggcaacaat ggggtgaatc cctcgcccag
     4861 gctcaccgct ccagacgcgt cggcgggcag cagatcgccg tagcgccaca aaccggaacc
     4921 ggtggacgat gccggacgcg gaacgagcat tgccgggtca tagacaacgg ccagaccact
     4981 tggcgtgtca ctacggcagg atggacagtc gcggtcgtga tgggacagcg gatacaggcg
     5041 tcgacaccgc agacaacgca ggcctgtagc gtaggtcata aacgcaggcc tgaggcgtaa
     5101 aacatgatgg atggtaggac agcggtcgcg aaaccgtcaa acctggaatc cagcagaaac
     5161 gcggccgctc caaagcagcg ttggtgcgcg aatagattgg cggttgtgtt tatcccgctt
     5221 ggcatgtgcg gcagcgggtc cgggcggcga ccggcatacc gagacctgtc attcggtcga
     5281 gcacgttgca cccgctttcg cctcgatccg gtgattgggc agaatccggg cgtgcagccg
     5341 tcggccgatg atcgtcttgt agcgatacat cgcgccttcg atcaaactcc ggcgattata
     5401 gccggagctt cgctgccaac ttatacgtcc atgcttcgca atggttgtga gatgtttgct
     5461 gtgttgtgtg gctgtcgttt cacccgcaac gacgttaccc gtggtagatt aacaatcgac
     5521 gctctcggct aacgatcggc aaccgtgtta cgccgtgttg ccgaactcga tgcgtgctgc
     5581 gatcggagag cctgtgcgcc agattctcga ttgattccac ctgcccatgc gcgtacggcc
     5641 tatcggacaa gtcctaaccg gtctatccgc gcgtaagctc cagaatcacg gttctgtgca
     5701 ggcgttgtgc ggcattccgc gtcaccgcgc cgtcgcgttc cggcggcgag gtgacatccg
     5761 ggtcaaacgc atccggcggc cccgctatgg ctgccgtgcc tgcgagggtg ccgtggttca
     5821 gcaacagaag cgtcttccga cagggtggtc agcgatgcga gggcggcgct cggggtccga
     5881 tagaccgcgg ccccgctctt ggcagagagg tgcatccgtc aatcaccgaa ggacgccact
     5941 ggcgaaatcg gcacttccga cgattcagcg gacgccttcc gatcagcccg aagcacaccc
     6001 atggcaacaa agagcgttgc ggaaaaggtg gccgcggcag cgaaatagtg gcggccgacg
     6061 ccgtcatgcc agaagtgaaa catcggctcg ctgattgaga tcaggagcag acgcgccacg
     6121 ttgaacgcga tttggatgaa gccggcccag acaccgatcc acagatcgtg ccgcgtccag
     6181 tagggccggt gtgccatggt aatcgtgacc cagcacagcg tggccagtga cagattgtgg
     6241 aacgacgaac agcccgcgag aaccacgacg ctgtgcccgt tgattgagtt aatgaccgtg
     6301 ccggaccaac ttgcgccagg caggattgtt gaaagcagga aaccagccgc cgccgcgtcg
     6361 agcggaagga gaaatggtga gatcttcgca aacacaaggg gcgccacgac ggcctggaca
     6421 gcaatcgcac cgacgatcgt tcctgctgct ttcatttgga gggcgccgcg gctaccgcgt
     6481 agaaggcaca tcgcggctat gatgacggca attccgtgaa aattgaacag cgtcaacaag
     6541 acagcggcag tcagggaggt gatctggaag gcagtggcgg ggatcggacg cgcctttgcg
     6601 agacagtaga tggccgcgag taggccgagc agctggaaaa cctgcaaacc attttggaca
     6661 cctatgacgt cgggatcatc aagcccgaat cgaggcgtcg atgccaccat tccgcaaacg
     6721 acgaacgcca ccgtgccgat cagtatgaac ttttgtgccc gatacagcat tccagccgac
     6781 cgattcatgg ctttgaacgt agccatcgcc attccgaggg cacaccgtct ccttcag
//
LOCUS       DATAVD010000923         2766 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1390002, whole genome shotgun sequence.
ACCESSION   DATAVD010000923 DATAVD010000000
VERSION     DATAVD010000923.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2766
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1390002"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1313)
                     /locus_tag="VHX39_17785"
     CDS             complement(<1..1313)
                     /locus_tag="VHX39_17785"
                     /inference="COORDINATES: protein motif:HMM:NF019011.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M81 family metallopeptidase"
                     /protein_id="HEX3993026.1"
                     /translation="MTGPHVALLGFSIECNRFAPIAFETDFRARTLLGGETMLANARS
                     PAPMMLGEMPGFVADMDAAGPWQPKPGLLAMAEPNGPVSQEFFDRMMMQWEADLRAAG
                     DLEGVYCVLHGAGLTVNDHDPEGTLLTMVRRIVGDRVPVVATYDLHANVSAANVDLVN
                     AYIGYRTNPHLDMRERGIEAAQMLRRLMHGTRTYLSHIRLPIVPPTVTMLTGQDATNR
                     PYGELIDLGQQRMREAPWSGRVLNVSVMGGFAFADTPFNGLTVVVTALDQAAADGLAR
                     EIAEAGWARREQFQPRLTSLEDATAQAKATEDKACHALIFADVADNPGGGGRGNTMGI
                     LDSFLTAGVQNGLVGVIHDPALAAEAHVRGFGTRFLAQFNREGGDAFSKPFAAEATVV
                     GLRDQAVRGRRGIYANNTLDLGLAAALRIGGLTIVVISNRMQCADP"
     gene            complement(1310..2446)
                     /locus_tag="VHX39_17790"
     CDS             complement(1310..2446)
                     /locus_tag="VHX39_17790"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEX3993027.1"
                     /translation="MSDPAYFDPLTGRTYPIATPRWCSDNQTPLLLTDLSGMAKAQID
                     TGERSLWRYRTALPFQCAEPISMGEGLTPLIPRTLHGARALLKCDWMNPTGSFKDRGS
                     SVMLSLLRAQGIRHVLEDSSGNGGAAVAGYAAAGGMRATIMTPASTSPGKTVQMRAYG
                     AEIRLIPGSRQDTAEAAMREAEAIFYASHNWHPFFLQGTKTLAYELWEDLGFRIPDNI
                     ITPCGAGSNVLGCAIGFSELLRAGEITRLPRIFAIQPANCGPLATAFLAGTDDEVATP
                     IEPTIAEGTAIAKPIRRREVIAALRDTNGGAVLVSEAEIVSGLFELAQTGIYVEPTSA
                     QVVAGFSALLTQGKIRPDETTVLVMTGSGLKATSRIAEHMGIAT"
BASE COUNT          490 a          861 c          882 g          533 t
ORIGIN      
        1 ggatcggcgc attgcatccg gttgctgatg acgacgatgg tcagtccgcc gatccgcaac
       61 gccgcggcca gaccaagatc cagcgtattg ttggcataga tgccgcgccg cccgcgcaca
      121 gcctggtcgc gcaggccgac cacggtcgct tcggcggcaa acggtttgct gaatgcgtcg
      181 ccgccctcgc ggttgaactg cgccagaaac cgcgtgccga agccgcggac atgtgcctcc
      241 gccgcgagag cgggatcgtg gatcacgccg accagaccat tctgcacacc ggctgtcagg
      301 aatgaatcga ggattcccat cgtgttgccc cgccccccgc cgcccggatt gtccgcgaca
      361 tcggcgaaga tcagcgcatg acaggccttg tcctcggtcg ccttcgcctg cgcggtggcg
      421 tcttccaggc tggtcaatct gggctggaat tgctcgcgcc gtgcccaacc ggcctcggcg
      481 atctcgcgcg cgagcccgtc ggcagccgcc tggtcaagcg cagtgacgac aaccgtcaat
      541 ccgttgaacg gcgtgtcggc aaaggcgaaa ccacccatga cggagacgtt cagcacccgc
      601 cccgaccacg gcgcttcgcg catccgctgc tgaccgaggt cgatcaactc gccgtacggc
      661 cggttggtgg catcctggcc ggtcagcatg gtgaccgtcg gcggcacgat cggcagccga
      721 atgtgagaca ggtaggtgcg ggtgccgtgc atcagacggc gcaacatctg ggctgcctcg
      781 atgccgcgct cccgcatatc cagatgcggg ttggtacggt agccgatata ggcgttcacc
      841 aggtcaacgt tggccgccga cacattggcg tgcagatcgt aggtcgcgac aacagggacc
      901 cggtcgccca caatgcggcg gaccatggtc agcagcgtcc cctcgggatc gtggtcgttc
      961 acggtcaatc cggcgccatg cagcacgcag tagacgcctt cgagatcgcc tgccgcgcgt
     1021 aagtcggctt cccattgcat catcatgcgg tcgaagaatt cttgcgacac cggcccgttc
     1081 ggctcggcca tcgccagcag accgggtttg ggttgccagg gaccagccgc gtccatgtcg
     1141 gccacgaagc cgggcatttc gcccaacatc atcggtgccg gggagcgggc gttggccagc
     1201 atggtctcgc cgccgagcaa ggtcctcgcc cgaaagtcgg tttcgaatgc gatcggcgca
     1261 aagcgattgc attcgatgga aaagcccagc agggcgacgt gcgggccggt catgttgcga
     1321 tccccatgtg ctcggcaatc cggctggtgg ccttcagacc gctgccggtc atcaccagga
     1381 cggtcgtttc gtccggccgg atttttccct gtgtcagcaa cgccgaaaaa cctgccacca
     1441 cctgggccga cgtcggctca acatagatcc cggtttgggc gagttcgaac agtccgctaa
     1501 cgatttcggc ttcggaaacc agaaccgcgc cgccgttcgt gtcgcgcaag gcggcgatga
     1561 cctcgcggcg ccggatcggt ttggcgattg ccgttccttc ggcgatggtc ggttcgattg
     1621 gtgttgccac ttcgtcatcc gtgccggcga ggaaggcggt agcgagcgga ccgcaattcg
     1681 ccggttgaat ggcgaaaatc cgcggtaggc gtgtgatttc gcctgcccgg agcaactcgg
     1741 agaatccgat cgcgcagccc aacacatttg agcccgctcc gcagggggtg atgatattgt
     1801 cgggtatgcg aaaccccaaa tcctcccaga gttcatacgc cagcgttttg gtgccctgaa
     1861 gaaagaacgg gtgccagttg tggctggcat aaaagatcgc ctccgcctcg cgcattgctg
     1921 cctcggcggt atcctggcgg ctgcccggga tcaggcggat ctcggcgccg tacgctcgca
     1981 tttgcacggt cttgccgggg ctggtcgagg ccggggtcat aatcgtcgcc cgcatgccgc
     2041 cggccgcagc atagccggcg acggccgcac cgccgttgcc agaactatct tcaagtacat
     2101 gcctgattcc ctgggcgcgc agcaacgaca acatcacgct ggaacctcgg tccttgaagc
     2161 tgccggttgg gttcatccag tcgcatttga gcaacgcgcg tgcgccgtgg agggtgcggg
     2221 ggatcagtgg tgtcaaaccc tcacccatgg aaattggctc ggcgcattgg aaaggcaatg
     2281 cggtacgata gcgccacaga ctgcgttccc cggtgtcaat ttgggctttg gccatgccgg
     2341 agagatcggt cagcagcagc ggcgtttgat tgtcgctgca ccaacgtggg gtggcgatcg
     2401 ggtatgtgcg gccggtgagg gggtcgaaat aggcgggatc ggacatacgg tcgaactttt
     2461 ccaatgccgt gtcggtgcac agtgaaattc gtacggtgtc aaggccacct tgctgtttac
     2521 gagcggcaaa tcctgagcat cgttatccga ttgagatcgt acttagtgcg atttcacagt
     2581 cttgccgtaa cggtggaaac gacacatcct ctccgctgat cgtggcgtgt cccgggattg
     2641 tgcaaccctt ttgtaccaaa tggggccccg cgatgcgtta cgatgcacct ttgatcgctc
     2701 agcccaggca cgacagttgt tgggctgccg ctctcgcgat ggtcgtttcc tggagtgatc
     2761 cgacgc
//
LOCUS       DATAVD010000924         6485 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2880402, whole genome shotgun sequence.
ACCESSION   DATAVD010000924 DATAVD010000000
VERSION     DATAVD010000924.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6485
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2880402"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..2282
                     /locus_tag="VHX39_17795"
     CDS             78..2282
                     /locus_tag="VHX39_17795"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
                     /protein_id="HEX3993028.1"
                     /translation="MSLLDAITLPTRSRRTPLVLQQEAAECGAACLAMVLAYHGAWVP
                     LDELRVRCNVSRNGSKASSIIAAAATFGLIGRGFRHETETLRTVKLPCVLFWNFNHFV
                     VLDGFDRSGRAKLLDPGTGTRTVTAEEFDKSFTGVCLTFEPGQNFVRHGTRPRLLPIL
                     RSQLIGVEKSFVLLTGFAALGAVPLVVSPVLVRIFVDDVLLRGQLRWVAPLTVAAVIT
                     TLFLLIAMVFRRRLLVAIETWIGTAGEGRFIARLFSLPLGFFAQRHTGDLVDRLGAFN
                     RFAKVLTGPFAEGLSGAIVAAMLLVAAIVIDPLCGLAVAAMAGLTVAGAVLAGRAIIA
                     RSDLLRRSESLLASATLEGLRLMDSMRAAGRLMDAFSRWSGAQARASRQLAELETIQT
                     RLRAVPQVAVGLMSVAVLAVGGWQAMRGAIGIGQIVALQMIATASLRPLNSIVLGMLS
                     GPEIRADVARVDDVFRHPVEPAPKLPAPTSPKGRLEFRHVTFGYIRTERPVVDDVSFV
                     VEPGRRVALAGSSGSGKSSMAKLASGLFTPWSGEILLDGVPVNGLAPAERAALIGYVD
                     QAVVLFEGTVHENLSLFRPNLSDSRATQVLREVAMLTDIEARPGRLEAMVAEYGANFS
                     GGQCQRLEIARAIAANPVVLVLDEATSALDPLVEQEIEANLRRLGITSLVVAHRLSTI
                     RDADEILVMDKGKVIERGRHNELIALGQHYLALAREFPEGGSEETAILVTAA"
     gene            2279..5113
                     /locus_tag="VHX39_17800"
     CDS             2279..5113
                     /locus_tag="VHX39_17800"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3993029.1"
                     /translation="MKESATLRHLEPGQRFRVAPEQFVSIMSGGVNAAAVPFRDDLPD
                     GPGLHLATLSPGDLAFGLVTPELTIELSVLMPTTIATGDLLEDAAVPALDRWLRDVER
                     VDGYTPFTSPRAVFPGQATIGAGEFVAAPRESIVWVGEPQGWTVLSDTNPRSWPVQMD
                     VEIRTTAGLVSSGGLAVALREWNIATAARLSRLVAREPGRRAGNVAAASIAGAEAAAA
                     ARAAVSGIAAGLVGHATTSLTEAVARIVRRSNAAVLTGDADRLETARQAAGQAGMGAR
                     VVALNQPLDGEKGPPLLLALESDAAPPSIGAALTGAAGYLIDGMSQRSLSKRTGMRVA
                     ARAVAVTEPLSERLVAALVKPARLFAAVLAASPVDASVALLWGIGAIALSIAMPVAVN
                     LLFTSIWPRADVSGHWMVIVALMAITFTSVGFEAARSLRARRLAMQFGGVLENGLWLR
                     LVRARPRGSVSGGGDTLERILTASHLNRLLGSQPMKFATDLGLLAIGIAQMIYYGGQL
                     AWIGAAAALLIVLFCIVLMPAATKAWTETEELSGKQAALLAQAIAAVTKIKATASENF
                     ILARWAALADRRRGALRRAEWMATLVALATAGIGGIATAAVFVLAGFALGLGNAEAGL
                     LGTASEPVTPAITLGAFLAFQVSLGQSISAATSASEMTTLWPSLAAAGARITPVAVLP
                     PETIGPRTTPPALEGAITVSQVTHRYPGSDAPSLDHIELEIAPREYVAIVGASGSGKS
                     TLLRIILGLEQPDQGAVYFDGLDAKQLDPAPLRRQIGYVGQDSRLSPGTILDNILDGR
                     DAELPAAWEAAHLSGLAQDIEAMPMGMQTLVGEGGQNISGGQRQRILIARAVLSRPRI
                     LIFDEATSALDNRSQSTVQRGLAELPVTRVVVAHRFSTIRRVNRVFVLSRGRLVESGP
                     PEELLRQGGAFARLAGRQLLSGFDPVQGNA"
     gene            5113..5625
                     /locus_tag="VHX39_17805"
     CDS             5113..5625
                     /locus_tag="VHX39_17805"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEX3993030.1"
                     /translation="MPTALFLFVALLDTDMRWMTRVGVVRAYAAGDRLISRDEQLNGL
                     LIILEGSADVEIVGRTLTRRAGECLGEVSLVDTRPASATVTAVEPTRALWLDGEVLRQ
                     RFELDPGFAARCFRGLAILLANRLREATTAPEQMDDALLLDETMMDGIARAGERFRLL
                     LSYTNAEASP"
     gene            5622..>6485
                     /locus_tag="VHX39_17810"
     CDS             5622..>6485
                     /locus_tag="VHX39_17810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993031.1"
                     /translation="MSSTLPANPSRQLFRARALQNAASTEALDVLPLLPRPVDQAGFV
                     LLAILLAVGIGWSYFGTVARTVSGSGILIAQGGQLVEAQSTGAGRITDLAVRPGMAVE
                     AGSLIASVVAADREQRLASAQSLADARRANLQRVRDITESVSQQRTAAEQLQRSAQED
                     RVRVSEDRIRTTAEQYDIQQGLLRRGLATLAKVNEARDAMNGARGDAAQALTALADIQ
                     AKAAEEARVDAERISQAREDLAAAERALAETEVETSTTARVIAPVSGRVVEIKANVGS
                     VVSAGQAIVSIE"
BASE COUNT         1026 a         2010 c         2182 g         1267 t
ORIGIN      
        1 taacgccggg ataccgtcac agcccagtac accccgcgtt ccccacagat cattgaacaa
       61 gtgaaccgac gccgctgatg tccttgcttg acgcgataac gttgcccacg cgctcccgtc
      121 gcacaccact tgttctgcag caggaggcgg cggagtgcgg cgccgcctgc ctcgcgatgg
      181 ttctggccta ccatggcgcc tgggttccgc ttgatgagct gcgggtgcga tgcaacgtgt
      241 cgcgcaacgg atcgaaggcc agttcgatca tcgcagcggc cgcgaccttc ggtttgatcg
      301 gccgtggttt ccgccatgaa acggagactt tgcgtaccgt caaactgcct tgcgtgttgt
      361 tctggaactt caaccatttc gtggtgcttg acggcttcga ccggtctggg cgggcaaagt
      421 tgctggaccc cggaaccggc acgcgaaccg taaccgccga agagttcgac aaatccttca
      481 ccggcgtctg cctgaccttc gaaccgggcc agaattttgt ccgccacgga accaggccac
      541 gcctgctgcc gatcctgcgt tcgcaattga tcggggtaga aaagagtttc gtactgttga
      601 ccggctttgc ggctctgggc gccgtaccgt tggtggtcag tccagtcctc gttcgcatat
      661 tcgtcgacga tgtgctgttg cgtggtcagc tacgctgggt tgccccgctg accgttgccg
      721 cggtgatcac gacactgttt ttgctgatcg cgatggtgtt tcgccgtcgg cttctggtcg
      781 ccatcgagac ctggatcggc accgccggcg aaggccggtt cattgcaagg ctgttttcgc
      841 tgccgcttgg attcttcgcc caacggcata ccggcgacct cgtggatcgc ctcggtgcat
      901 tcaaccgttt cgcgaaagtg ctgaccggcc cattcgccga agggctgtcc ggcgcgatcg
      961 tcgccgcgat gttgctcgta gcggcaatcg tgatcgatcc gctctgcgga ctggcggtcg
     1021 cggcgatggc gggcctgacg gtggccggtg cggtgctcgc cggacgggcg atcatcgcgc
     1081 gcagtgatct gttacgccga tccgaaagcc tgttggcctc cgcaacgctg gaggggttgc
     1141 gcctgatgga ctcgatgcgc gccgccggcc ggttgatgga tgcattttcg cgctggtctg
     1201 gcgcacaggc ccgcgcctcc cggcagttgg ccgagttgga gaccattcag acccgtctgc
     1261 gcgccgtacc gcaggtggcc gtcggcctca tgagcgtcgc ggtgctggcc gttggcggct
     1321 ggcaggccat gcgcggcgcg atcggcatcg gtcagatcgt cgcgctacag atgatcgcaa
     1381 ccgcgtcgct caggccgctg aacagcatcg tgcttggcat gctctccggt ccggagattc
     1441 gagccgatgt ggctcgtgtg gatgacgtgt tccgtcatcc ggttgagccc gcacctaaac
     1501 tgcccgcacc gacttctccc aagggacggt tggagtttcg tcacgtcaca tttggttata
     1561 tccgcacgga acgtccggtc gtggacgatg tgtcgttcgt cgtcgagccg ggacgacgcg
     1621 tggcgctggc tggctcttcg ggcagcggca aatcgtcgat ggcgaagctg gcgtccggat
     1681 tgttcactcc gtggtcgggc gagatcctgc tcgatggcgt cccggtcaat ggcctggcac
     1741 ccgcggaacg ggctgcgttg atcggttatg tggatcaggc ggtggtattg ttcgagggca
     1801 ccgtccacga gaatctctcg ctgtttcgcc ccaatctgtc cgattcgcgc gcgacccagg
     1861 tcctgcggga agtcgccatg ctcaccgata tcgaagcccg gccgggccgg ctcgaggcca
     1921 tggtcgcgga gtacggtgcg aacttctccg gcggtcagtg ccagcgcctg gaaattgccc
     1981 gcgccatcgc cgccaacccg gtggtgctgg tgctggatga ggcgacgtct gcactcgacc
     2041 cattggtcga gcaggagatc gaggccaatc tccgccgcct ggggatcacc tcgctggtcg
     2101 tggcgcatcg tctgtcgaca atccgcgacg ccgacgaaat cctggtgatg gataaaggca
     2161 aggtcatcga gcgcggccga cacaacgaat tgatcgccct ggggcaacat tatctcgccc
     2221 ttgcccgtga gtttcccgag ggcgggtccg aggagacggc tatcctggtg acggcggcat
     2281 gaaagagtct gccacgctgc gtcatcttga accgggtcag cggttccgcg ttgcccctga
     2341 gcaattcgtc agcatcatgt cgggtggcgt gaacgccgct gcggtaccct tccgcgacga
     2401 cctgcccgac ggtcctgggc tgcaccttgc gacactttcg cccggtgacc tcgcctttgg
     2461 tctcgtgacg ccggagctca cgatcgaact ttccgtcctg atgcccacga cgattgcgac
     2521 cggtgacctg ttggaggacg ctgctgttcc tgcactcgat cgctggttgc gcgacgtcga
     2581 acgggtcgat ggctatacgc cgttcacctc gccgcgcgcg gtgttccccg gccaggcaac
     2641 catcggagcc ggggaatttg tcgccgcgcc gcgggaaagc attgtctggg tcggcgaacc
     2701 tcaaggctgg acagttctgt ccgacaccaa tccgcgctcc tggccggtcc agatggatgt
     2761 cgaaatcagg acaaccgcag gattggtctc atcaggcggg ttggcggtcg cgttacgcga
     2821 atggaacatc gccaccgccg cacgcctctc tcgcctggtc gcccgagagc ctgggcgccg
     2881 cgccgggaat gttgccgcag cctccattgc gggtgccgag gccgccgccg cagcccgtgc
     2941 cgcagtttcg ggaatagcgg ctggactcgt tggccacgcc acgacctcct tgacggaagc
     3001 ggtcgcgcga atcgtaaggc gcagcaacgc ggccgttctg acaggcgatg cggatcggct
     3061 tgagaccgct cgccaggcgg ctggtcaggc cggcatgggt gcgcgcgttg ttgccctcaa
     3121 ccaaccgttg gacggcgaga agggaccgcc attgcttctt gctctggagt ccgacgcggc
     3181 tccgccctcc attggcgcgg cgctgaccgg tgcggcgggc tatttgatcg acggaatgtc
     3241 gcagcgcagc ctgtcgaagc gaaccgggat gcgcgttgcc gcccgtgcgg tggcagtgac
     3301 cgaaccgctc tccgagcgcc tcgttgccgc gcttgttaag cccgcccgat tatttgccgc
     3361 tgtcctcgcg gcttcgccgg tcgacgccag tgtcgcgctg ctgtggggaa tcggtgccat
     3421 cgctctctcg atcgcgatgc cggtggcagt gaaccttctg ttcacctcga tttggcccag
     3481 agccgatgtc tccggccact ggatggtgat tgttgcgctc atggcgatca cgttcaccag
     3541 cgtcggcttt gaggcggctc ggtccttgcg ggccagacgg ctggccatgc aatttggcgg
     3601 cgtgcttgag aatggcctgt ggctgcgtct ggtacgggcg cgtccccgag gctcggtttc
     3661 cggcggcggc gatacgttgg agcgcatcct gaccgcgtcg cacctgaatc ggctgctagg
     3721 atcgcaacca atgaagttcg cgaccgatct cggattgctg gcgatcggca tcgcacaaat
     3781 gatttattac ggtggacagc tggcctggat aggcgccgcc gctgcgttgt tgatcgtgct
     3841 gttttgcatt gtgttgatgc ctgccgcgac caaggcgtgg accgagacgg aagaattgag
     3901 cggcaagcag gcggccttgc ttgcccaggc gattgcggcg gtgaccaaga tcaaggccac
     3961 ggcgagtgaa aatttcatcc tggcgcgttg ggctgcgctc gctgatcgcc gtcgcggcgc
     4021 gttacggcgt gccgaatgga tggcgacatt ggtggcgctg gcgacagcgg gaattggcgg
     4081 cattgccact gccgcggtct tcgtgttggc cggcttcgca cttgggttag gcaacgccga
     4141 ggcgggcctc cttggcactg cgtcggagcc ggtaacgccg gccatcaccc tgggggcctt
     4201 tttggcgttt caggtcagtc tgggtcagtc catttcggca gcgacttcgg catccgaaat
     4261 gacaacgctt tggccgagcc tggctgcggc cggtgcgcgg atcacaccgg ttgcggtgtt
     4321 gccaccggaa acgatcggcc ctcgcaccac gccgcccgcc ttggagggcg ccatcacggt
     4381 cagccaggtt acccaccgct acccgggcag tgacgcgcca agtctcgacc atatcgaact
     4441 ggagatcgcg ccgcgcgaat acgtcgcaat cgtcggggcg tccggatcgg gaaaatccac
     4501 cctgttgcgc atcattctgg gattggaaca gccggaccag ggcgccgtct acttcgatgg
     4561 actggatgca aaacagctcg atccggcacc gttacgccgc cagatcggct atgtcgggca
     4621 ggattctcgc ctgtcgccag gcaccatcct ggacaacatt ctggatggcc gcgatgcgga
     4681 attgcctgcc gcgtgggaag cggcccatct ctccggactg gcgcaggaca tcgaggcgat
     4741 gccgatggga atgcagacgc tggttggcga agggggccag aatatctcgg gagggcaacg
     4801 tcaacgtatt ctgatcgccc gcgcggtgtt gtcgcgccct cgtatcctga ttttcgacga
     4861 ggcaaccagt gcgctcgaca accgttccca gagcacggtg cagcgggggc tggccgaatt
     4921 gccggtcaca cgcgttgtcg tggcgcaccg cttcagcacc attcgccggg tgaaccgggt
     4981 tttcgtactg tcgagaggca ggctggttga atcgggacca ccggaggaat tgttgcggca
     5041 gggtggcgcg ttcgccaggc tggcgggccg ccagttgctc tccgggttcg acccggtcca
     5101 gggaaacgcc tgatgccgac cgcgctgttc cttttcgtgg ctttgctcga cactgacatg
     5161 cgctggatga cgagagttgg cgtggtgcgt gcctacgccg cgggcgacag gctgatcagc
     5221 cgcgacgagc agttgaacgg cttgctgatc atccttgagg gttccgcgga tgtggagatt
     5281 gtcggccgca ctttgacgcg tcgcgccggg gagtgtcttg gcgaagtctc gctcgtcgac
     5341 acgcgccctg ccagcgccac ggtcacggcg gtggaaccaa cacgcgcgtt gtggctggac
     5401 ggggaagtgc tgcggcagcg cttcgagctg gacccgggtt tcgcagcacg ctgctttcgc
     5461 gggctggcga tcctgctcgc caatcgcctg agggaggcga ccaccgcgcc ggagcagatg
     5521 gacgacgcac tactgctgga tgagacgatg atggacggca ttgcccgcgc cggtgaacgg
     5581 tttcgcttgc tgctgtcgta tacgaacgcc gaggcatcgc catgagcagc acgttgccgg
     5641 ccaacccatc gcggcagtta ttccgtgcac gcgctctgca aaacgctgcc agcaccgagg
     5701 ccctggatgt cctgccgctg ttgccgcgac cggtcgacca ggcggggttc gtcttgctgg
     5761 ccatcctgct ggcggtgggg attggctggt catatttcgg cacggtcgca cgcacggttt
     5821 ccggcagcgg catcttgatc gcgcagggcg gccaactggt agaggcgcag tccactggtg
     5881 ccggccgcat cacggatctc gctgtccgtc ccggcatggc ggtcgaggcc gggtcgctga
     5941 tcgcctccgt cgtggccgcc gatcgagagc aacgtcttgc cagcgcacaa agtctggccg
     6001 acgcgcgccg ggccaacctg cagcgggtcc gtgacatcac cgagagcgtc agtcagcaac
     6061 gcacggcggc cgagcagctg caacggagcg cgcaggagga tcgggtaagg gtgtccgagg
     6121 accgcattcg gacaactgcc gagcagtacg atattcaaca gggcctgctt cgccggggcc
     6181 tggcgacact ggccaaggtg aacgaggcgc gggatgccat gaacggcgct cgaggggatg
     6241 ctgcgcaggc gctgacagcg ctcgccgata tccaggccaa agccgcggag gaggcgcgcg
     6301 tcgatgccga acggatctcg caggccaggg aagatctggc tgccgccgag agggcgctgg
     6361 cggaaaccga agtggagacc tcgacgaccg cgcgcgtcat cgcaccggtg tctgggcggg
     6421 tggtcgagat aaaggccaat gtcgggtccg tggtgtcggc gggacaagcc atcgtttcaa
     6481 tcgaa
//
LOCUS       DATAVD010000925         1764 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1949716, whole genome shotgun sequence.
ACCESSION   DATAVD010000925 DATAVD010000000
VERSION     DATAVD010000925.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1949716"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            659..>1764
                     /locus_tag="VHX39_17815"
     CDS             659..>1764
                     /locus_tag="VHX39_17815"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHYT domain-containing protein"
                     /protein_id="HEX3993032.1"
                     /translation="MVVTGTYNAFLVALSILVASLASYTALDLSGHVPAARGVARHIW
                     LVAAAIAMGGGIWSMHFIGMLAFVMPIPVSYDIGPTAVSLLVAIIVTGGAFHVLSRRS
                     ASPRHLVFSGIFMGLGIAAMHYTGMAAMRGHALLSYDPLFVALSLVIAIGASTGALWL
                     AFRTTDLWQKLAAAVLMGLAVSGMHYTGMRAAVFVAQGTVHEARSDAAFDQSSLALAI
                     AGITFVILIMAWIASLFERNRAEESLRQAQADLARVNRVTTLGELTASLSHELNQPIS
                     AVVASANACVRWLAGDPPNLEMARAAAKRMVRDGTRAADIITRTRLLFTKDMTPRESV
                     DINEIIREMTVLLRSEAMRHAVSVRAELATDLPHV"
BASE COUNT          315 a          537 c          557 g          355 t
ORIGIN      
        1 gggcgcacgc cggccgaacc aactcgacgc ggtgagcgag atagcgggct ggaagctgga
       61 tgcctcagcc atgcaggaga tcgatcgcat tgttgcatcg tgcgttgccg atcccgttgg
      121 gccagaattc atggctccgc ccgatcggct ggccgcttag gatcagatcg cgaatgggcg
      181 acgatccaac acaccaatgg gtgatgtcaa ccgaatgctc ggcgtcgcgc tgctttgatt
      241 ggtgacgcca gtaaccggca tccgaaggtc tcgagataag gaggaatgat catcaaccgt
      301 tgcgagcacc gccggtccac ctcaggccaa aaaaggacca ggccgcaatt tgcgttgccc
      361 cgcagaggca ccggcagagg cgtaccttcg gctgggccgg cgttgtggct caaaattctg
      421 ctctgaagcc gccggcacag ggcgttggcg ccgggaatgt agcgccgggt cggaccgggc
      481 aggcccgcag gcccccagat tgcgatgaca gcgccgaagg agcatcctga taccggctga
      541 ccaggcggtg aggaatgtcg gcagttagcg cgttccaacg acgtgttggg gtgcacctgc
      601 cagtgggccg gggatttgtc gtccggcggt ctctggtccg aaaattgggg cgttcccgat
      661 ggtcgttact ggaacataca atgcatttct cgttgctttg tctattctgg tcgcatccct
      721 cgcgtcctac accgccctcg atctcagcgg gcacgtgccc gccgcccggg gagttgcgcg
      781 ccacatctgg ctggtagcag cagcgatcgc aatgggaggc ggaatctggt cgatgcactt
      841 tatcggcatg ctcgccttcg tcatgccgat accggtgtcc tacgatatcg ggcccacagc
      901 ggtttcactc ctggtggcga tcatcgtgac cggcggtgca ttccacgtcc tcagccgccg
      961 gagtgcatcg ccgcgtcacc tcgttttcag cggtattttc atgggacttg gcatcgccgc
     1021 catgcattat accggcatgg cggcgatgcg agggcacgct ttgctcagct acgacccttt
     1081 gttcgtcgcg ctctctctgg tcatcgcgat cggcgcgtcg acgggggcac tgtggctggc
     1141 attccgaacc acggatctgt ggcaaaaact tgcagcggcg gtcctcatgg gcctggccgt
     1201 ttccggcatg cactacaccg ggatgcgagc agccgttttc gtcgctcagg gcacggttca
     1261 cgaagcccgg tcggacgcag ctttcgatca aagcagtctg gcgctggcga ttgccggcat
     1321 taccttcgtc attctgatta tggcgtggat cgcttccctg tttgagcgga accgcgccga
     1381 agaaagtctg cgtcaggcgc aggccgatct cgcacgcgtg aaccgggtga ccaccttggg
     1441 agagttgact gcctctctgt cgcacgagtt gaaccagccg atttccgccg tcgtcgccag
     1501 cgccaatgct tgcgtgcgct ggctcgccgg cgacccacca aacctcgaaa tggctcgcgc
     1561 cgcagcgaag cggatggtgc gagacggcac gcgtgcggcg gatatcatca cccggactcg
     1621 tttgctcttc accaaggata tgacgccacg agagtcggtc gacatcaacg aaatcattcg
     1681 agagatgacc gtcctgctgc gtagcgaggc aatgcggcac gccgtttcgg tccgggcgga
     1741 actggcgaca gatcttcccc atgt
//
LOCUS       DATAVD010000926         1647 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_276006, whole genome shotgun sequence.
ACCESSION   DATAVD010000926 DATAVD010000000
VERSION     DATAVD010000926.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276006"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            256..453
                     /locus_tag="VHX39_17820"
     CDS             256..453
                     /locus_tag="VHX39_17820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993033.1"
                     /translation="MARDGIDAYEIAMRRLPEAHSLALRLTAAGVAPEVVCGYLHIEP
                     EGLDTFLQIAAEKLRAELRKR"
     gene            536..>1647
                     /locus_tag="VHX39_17825"
     CDS             536..>1647
                     /locus_tag="VHX39_17825"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3993034.1"
                     /translation="MQASPLTGRAEELEVITDVFRADGADAGVVIAGAAGVGKTRLAR
                     EAMAAARDCGWMVRWASGTLAAQSIPLGAFAQWADRLEGNPLQLVAGAIKAITTSPNG
                     APVLVVVDDARLLDNLSAFVLYQLVQRRAATVIATIRTGAPAPDEVTALWKDGHLRRL
                     DLQPLSHAESDQLLHTALCGPVCTTCSERMWNLTRGNVLFLHHLVAQEKQAGRLFTRN
                     GHWRWEGTMQVSPSLADLVDSRMGAMPEPVLDVVDLVAVAEPLELAHLAALVNPAAIE
                     DCEHRGLITVSHTTPISVARLGHPLYGEVRQMQAGLARLERLRGRVARAVAAANGNFG
                     PPDPVRLALLWLQSDLPPDRDVFTQAAQTAFRGLDM"
BASE COUNT          292 a          505 c          536 g          314 t
ORIGIN      
        1 accgcaattg ggtattcgcg gcagacgaat atcaccgtaa ccggctcagc cgagacgagg
       61 atccctcccg aaggaccctc gacaggttcg accttccacg acaccgtgac gtgcgacaat
      121 ggcctgtcgg ccagtgagga cgcagttttc tgagtgagtt gttcgctcct gcgcgttcgc
      181 aggtccaggc catgcgggca agccgcgtaa tcaactacct gatcccgcac ggcggcaccg
      241 gacgacactg agttcatggc gcgcgatggc atcgatgctt acgaaatagc gatgcgccga
      301 ctgccagagg cccattcact cgcgctgcgt ctgacggctg ccggggtggc gcctgaggtc
      361 gtgtgtggct acctccatat cgagccggaa gggttggaca cattcctgca gatcgccgcc
      421 gaaaaactgc gtgcggagct gcgcaaacgt tgaccgtcca gcagacggga taaatagttc
      481 gcctgattgg aacttttttg cgcgagcgtc aagatcttga tttagcattt gcctaatgca
      541 ggcctcgccg ctaacgggcc gcgccgagga actcgaggtc ataaccgacg tgttccgcgc
      601 cgacggagcc gatgcgggag tggtaatcgc tggtgctgcg ggtgtaggca agacgcgcct
      661 ggctcgcgag gcgatggctg ctgcccgcga ttgcggctgg atggtgcggt gggcatcggg
      721 aactcttgcg gctcagtcga tcccgttggg cgcatttgct caatgggcag atcgcctcga
      781 gggcaatccg ctgcagctgg tggccggtgc gatcaaagcg atcacgacgt cgcccaacgg
      841 tgccccggta ttggtggttg tcgacgacgc acgtctgctc gacaacttgt cggcgttcgt
      901 gttgtaccaa ctagtgcagc gccgcgcggc caccgtgatc gcaaccatcc gcaccggtgc
      961 gccagctcca gatgaagtga cggcgctgtg gaaagacggg cacttgcgtc gcctcgactt
     1021 gcagccgctc tcgcatgcag aatccgacca gttgctccat acggcgctgt gtggcccggt
     1081 atgcacgacg tgctccgagc gcatgtggaa cctgacccgc ggtaacgtct tgtttctgca
     1141 ccacctggtc gcccaggaaa agcaagccgg acgcttgttc acccgcaatg gccactggcg
     1201 atgggaaggc accatgcagg tgtccccgtc gctggctgac ctcgtggact cgcgcatggg
     1261 tgcgatgcct gagccggtgc tggacgtggt cgacctggtg gcggtcgccg agccgttaga
     1321 gctcgcgcat ttggccgcgc tggtcaatcc ggccgcaatc gaggattgcg aacatcgcgg
     1381 cttgatcacg gtatcgcaca cgacgcccat tagcgttgcg cgcctaggac atccgctcta
     1441 cggcgaggtt cggcagatgc aggcaggcct agcgcgcctc gagcggctgc gaggccgcgt
     1501 ggctcgggcg gtcgccgcgg ccaacggcaa ttttggccct cctgacccag tgcggctggc
     1561 gttactgtgg ctgcaatcgg atctgccgcc ggatcgcgac gtcttcaccc aagccgctca
     1621 aacggccttc aggggactgg atatgaa
//
LOCUS       DATAVD010000927         2482 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2880598, whole genome shotgun sequence.
ACCESSION   DATAVD010000927 DATAVD010000000
VERSION     DATAVD010000927.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2482
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2880598"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..885)
                     /locus_tag="VHX39_17830"
     CDS             complement(<1..885)
                     /locus_tag="VHX39_17830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthetase family
                     protein"
                     /protein_id="HEX3993035.1"
                     /translation="MPESHHEPTQTNGLRRYLSQLPAALGLLLLVGAIYVVQKEFRHL
                     RLRDIADALRAIPQTALLLSLSCTILSYFILTFYDRLGTIYAGRAVSYGRVAFASFCA
                     YALAHNLGFAAVSGAAVRYRLYAHWGLTPLQIGKTVAFCTLTFGLGGLVLGGTILLLE
                     PTTIPFFGEHLPSIVLRGFGLLLWGIVFGYLTLSFVLGSVRLRGHRIELPKWRMAMLQ
                     VALATVDVAVTATIFYVLLPRSPGLTWTIFLGVYVASYTAGLMANLPGGIGVFDTAML
                     FGLEAFVDAPHIVGAILVY"
     gene            complement(889..2481)
                     /locus_tag="VHX39_17835"
     CDS             complement(889..2481)
                     /locus_tag="VHX39_17835"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010513740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEX3993036.1"
                     /translation="MRNNVTEFPKAWPFEEAAKVARRLETSGRRQALFETGYGPSGLP
                     HIGTFGEVARTSWVRHAFTVMTGLPSKLLAFSDDMDGLRKVPDNVPNKDMLQRHLGQP
                     LTRIPDPFGTHPSFGAHNNARLRAFLDSFGFEYEFASSTDYYASGRFDAALIRVLECH
                     DKVLEVILPTLGTERRASYSPILPIHPRTGIVMQVPMDRIDPAAGTVTWRDPASGESF
                     ETSVKGGHCKLQWKADWAMRWYALGVDYEMSGKDLIDSVRLSSRLCRVLGAPPPETFT
                     YELFLDENGQKISKSKGNGLSVDDWLRYAPAESLGQFMYNQPQRAKRLYFDVIPRAVD
                     EYIANIEKIRTQPEAEQPANPVWHINFGRLPNHAGSPISFAMLLNLASVANAHTPDIL
                     WGFIRRYIPNATPDSEPLLARLVEHAIAYYHDFIRVKKQFREPEPFEREALKDLAATL
                     AALPPHTPAETIQNAVFEVGKRHPFPELRAWFGCLYQVLLGQPEGPRFGGFTALYGIP
                     ETIALIRHSLDRVPLDGAAAIR"
BASE COUNT          517 a          728 c          828 g          409 t
ORIGIN      
        1 atacaccaga atggcgccga cgatatgcgg cgcgtcgaca aacgcttcga gcccgaacaa
       61 catcgcagta tcgaaaacgc cgatgccacc cggcaaattg gccatcagcc cggcggtgta
      121 ggaagcgacg tagacaccaa gaaagattgt ccaggtaaga ccaggcgaac gtggcagcaa
      181 cacgtagaag atggtggcag tgactgcgac atccacagtc gccagggcaa cctgcaacat
      241 cgccatgcgc catttcggca actcgatgcg gtgcccgcgc agccggaccg agcccagtac
      301 aaacgacaac gtcagatagc cgaagacgat gccccacagc agcaagccga agccgcgcag
      361 cacgatggaa ggcaaatgct cgccaaaaaa cgggatggtg gttggttcca gcaacaggat
      421 cgtgccaccg aggaccagcc cgccaagccc gaaggtcaac gtgcaaaatg cgaccgtttt
      481 gccgatttgc agtggtgtca ggccccaatg ggcatacagc cggtagcgca cggcagcgcc
      541 tgacactgcg gcaaacccca gattatgcgc cagtgcgtag gcgcagaacg aggcgaaggc
      601 gacccggccg tacgacaccg cgcggccggc gtagatggtg cccaaccggt catagaaggt
      661 aaggataaag tacgacagga tggtgcagga aagcgacaac agcagcgcgg tttgcgggat
      721 cgctcgcaat gcgtcggcga tatcgcgcag ccggagatgg cgaaactcct tctgcaccac
      781 gtagatcgcg ccaaccagca gcagcaagcc aagcgcggcc ggcagctggc tcagataccg
      841 gcgcagcccg ttggtctgcg ttggctcatg atggctctcc ggcatcactc agcgtattgc
      901 cgccgcacca tcgagaggaa cccggtcaag gctgtggcgg atcaaagcga tcgtctccgg
      961 tatcccgtac agcgcggtaa agccgccgaa ccgcggacct tcgggctgac ccagaagcac
     1021 ctgatacagg cagccgaacc aggcgcgcag ctcgggaaac ggatggcgct tgccgacttc
     1081 gaacaccgcg ttctggatgg tctcggccgg cgtatgcggt ggcagcgcgg ccagcgtggc
     1141 ggccagatcc ttcagcgcct cgcgttcgaa gggttcgggc tcgcggaact gtttcttgac
     1201 ccggatgaag tcgtgataat aggcaatcgc gtgctcaacg aggcgggcca gcagcggttc
     1261 gctgtctggc gtggcgttcg ggatataacg gcggatgaag ccccaaagaa tgtccggcgt
     1321 gtgggcgttg gcgacgctgg cgaggttcag cagcatggca aacgagatcg gactgccggc
     1381 gtggttcggc aggcggccga aattgatgtg ccagaccggg ttggccggtt gctcagcctc
     1441 gggctgggtg cggatttttt cgatgttggc gatgtattcg tcgaccgcgc gggggatcac
     1501 atcgaaatac agccgtttgg cgcgttgcgg ctggttgtac atgaactggc ccagtgattc
     1561 ggcgggggcg tagcggagcc agtcgtcgac ggagaggcca ttgcccttgg atttgctgat
     1621 cttctggccg ttttcatcaa ggaacagctc ataggtgaag gtctccggcg gcggcgcgcc
     1681 gaggacacga cacagccggc tcgataggcg aacgctgtcg atcaaatcct tgccggacat
     1741 ttcatagtca acgcccaatg cataccaccg catggcccaa tcggccttcc actgcagctt
     1801 acagtggccg cctttcactg aggtctcgaa gctctcgccg ctcgccgggt cgcgccaggt
     1861 caccgtgccg gcggccgggt cgatccggtc catcggcacc tgcatgacga tgccggtcct
     1921 cgggtggatc ggcagaatgg gggaatagga cgcccggcgt tcggtgccga gagtgggcaa
     1981 gatcacctcc agcaccttgt cgtggcattc gagcacccgg atcaaagcgg catcgaagcg
     2041 gccggaggcg tagtagtcgg tcgaggaagc gaactcatac tcgaagccga acgagtcgag
     2101 gaatgcgcgc agacgggcgt tgttgtgtgc gccgaaactg gggtgggtgc cgaacggatc
     2161 gggaatgcgg gtcagcggct ggccgagatg gcgttgcagc atgtccttgt tcgggacgtt
     2221 gtcgggaacc ttgcgcagtc cgtccatgtc gtcgctgaat gccagcagct tcgacggcag
     2281 gccggtcatg acggtgaagg cgtggcgcac ccaggaggtg cgggcaacct cgccgaaagt
     2341 gccgatatgc ggcaggccgg aggggccata gccggtctcg aacaaagcct gacgccgtcc
     2401 cgaggtctca agccggcggg cgaccttggc ggcttcctcg aagggccacg ccttcgggaa
     2461 ctcggtcacg ttgttgcgca ct
//
LOCUS       DATAVD010000928         4075 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2509876, whole genome shotgun sequence.
ACCESSION   DATAVD010000928 DATAVD010000000
VERSION     DATAVD010000928.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4075
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2509876"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..479)
                     /locus_tag="VHX39_17840"
     CDS             complement(<1..479)
                     /locus_tag="VHX39_17840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993037.1"
                     /translation="MLLLTILAVLAAFRITPYYLPPNLGYLVLALLVATANLYWAGNI
                     IRLWPRVIGGSTGDWQVRLRSKLRIIDGTATGISALDELAQMTGLETVKAEISALIQR
                     LQIEAARIEKGLQTTPISLHMVFTGPPGTGKTAVARLYGEILRDLGVLEKGHLVETDR
                     "
     gene            complement(539..1030)
                     /locus_tag="VHX39_17845"
     CDS             complement(539..1030)
                     /locus_tag="VHX39_17845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993038.1"
                     /translation="MIAVISGVVCWFWLGSGRANPLKPTAPNVSDLTEVAEPEVAGAL
                     TTMNASNTLRAQFREGQEGGCRRPLAWVTLVAVPGEPPSRIRLISGTYYSPVFEVSAT
                     PVRVALPFPAPYETGHGTLTAIDVGGNATISLLPAWRISAQDGKTTRAVTWHPVKSCS
                     PAQ"
     gene            complement(1349..2269)
                     /locus_tag="VHX39_17850"
     CDS             complement(1349..2269)
                     /locus_tag="VHX39_17850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3993039.1"
                     /translation="MVEATTRRDTILVVDDTPETLGFLTDTLDDAGFTVLIATDGESA
                     LALVDQITPDLVLMDALMPGMDGFETCRRLKNEKLLSHVPVVFMTGLSETEHVVQGLV
                     AGGVDYVTKPIIVEELLARIRVHLTNARIAHGTRVALDATGRFLLATDQAARLLWCTP
                     KAKQLLAELFPAVAGQGPSLPPAVIEQIKQLRQPAAKSTARACLEVGGRRIELSFLSS
                     IGPDELLFRLAEVTAGGDEQLLQQTLQLTGREAEVLLWISRGKSNREIGEILHISPRT
                     VNKHLEQVFVKLGVENRASAAARAVRALSR"
     gene            complement(2262..>4075)
                     /locus_tag="VHX39_17855"
     CDS             complement(2262..>4075)
                     /locus_tag="VHX39_17855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3993040.1"
                     /translation="LCCTLEARCRDLCKTDSRFTEQLASFLKKVLPVKVAASLNTRAG
                     HFIGLLLFFNVIVVLLLSFIYRQYSGIAPAGREVISTTLWLVFLCLLILSGVGAWLTV
                     LAHESRRTAEQESARQTAMLMEEIEAHKRTDAALQKAKEVAEAANVAKTRYVVGISHE
                     IRTPLNSIFGYAQLLERGAAIPPENAARVIRRSSEHLANLVDGLLDISRIENGLLRLN
                     RDKVRLPEFLDQLVDMFSLQAAAKGIAFRYKPPANLPACVHTDQKRLRQILINLLSNA
                     IKYTESGHACLTIRYRSEVAEFEIADTGMGIPTEDLERVFEPFERGRAHAVRSLPGTG
                     LGLTITKLLTQIMGGEILVRSTLGEGTTFVVRLLLSQATHDLAETPARRRVHGYAGPR
                     RTILLADDDPSHLGLLQNVLAPLDFILLPAHDGRSSLELAAHHSPDLALLDISLPDMT
                     GWDVVRELRAASAGERHPKIAMVSANAYEYSPGGGGGPLHDAFLVKPIDIDLLLECVG
                     SLLQLEWVYEAPQVAGSSPAATNLHEKPPEQCLAHIGALYELGRIGHVRGIEAKLREM
                     EAEHPANGPFAAHLRSFISNFDLKRYMTVLESMQKHG"
BASE COUNT          723 a         1143 c         1390 g          819 t
ORIGIN      
        1 cggtccgtct cgaccagatg gcctttctcc agcacgccca gatcgcgcag gatctcgcca
       61 taaaggcggg ccacggccgt tttaccggtg ccaggtggtc ctgtgaaaac catatgcagg
      121 gagatcggcg tcgtctgcaa acctttctca atccgggccg cttcaatctg cagacgctgg
      181 atcagcgcgc tgatctcggc tttgaccgtt tccaacccgg tcatctgggc cagttcgtcg
      241 agcgcgctga tgccggtggc tgttccatcg atgatgcgca gttttgaacg gagccgcacc
      301 tgccaatcgc cggtggagcc accgatcacc cgcggccaga gccggatgat attcccggcc
      361 caatacagat tggccgtagc gaccagcaac gcgagaacga ggtagccgag gttgggcggt
      421 aggtaataag gggtgatcct gaaggcggcg aggacggcga ggatggtcag taacagcatg
      481 caaaagccga ccaatgggtt cggcccgagg aaacttcgca gagattgcca gatcctattc
      541 attgcgcggg gctacagctt ttcaccggat gccaggtgac cgcacgcgtc gtcttgccgt
      601 cctgtgccga aatgcgccaa gctggcagca gggagatcgt cgcattccct ccaacatcaa
      661 tcgccgtcag ggtgccgtgt cctgtttcgt aaggcgcggg aaacgggagg gctactcgca
      721 ccggcgtagc cgatacctca aaaacaggcg agtagtaagt tccagagatc aaacggatac
      781 ggctgggcgg ctcccccggc actgctacta aagtgaccca ggcgagcggc cggcggcaac
      841 caccctcctg cccctcccgg aattgggcac gcagggtgtt tgatgcattc attgtggtca
      901 atgcacctgc aacctcaggt tccgctacct ccgtcaggtc gctgacattg ggtgcagtgg
      961 gtttgagcgg atttgcgcgg cccgacccca gccaaaacca acaaacgacg ccggaaatca
     1021 ccgcgatcac tgtggtcaga ccgattccag gtagggcgcc tcgattcttc cttcgcggcg
     1081 cagaacgcct tgcttccgtg tcttgcgtca tgtctggcat cactgctgtc tcgttgcggt
     1141 ctgatcattt taaataatcg cgttggcgtc ggctgcgttt ccaccggttg gtcgtaaaga
     1201 gcgccacatg gcggttgtaa acccttgttt ttactagggg tggggacctg tttggagtca
     1261 ggcggcggcg ggagtcgaaa gtcctgtcgc cacgtcgcca tggacttgta acgcaatgta
     1321 cagcgggcgc cagatgctgc gggtggagtt agcgagacag ggcgcggact gcgcgggcgg
     1381 cggcggaggc gcggttttcg acgcctagtt tgacgaagac ctgttcgagg tgtttgttga
     1441 ccgtgcgcgg gctgatgtgg aggatttcgc cgatctcgcg gttggatttg ccccggctga
     1501 tccacaggag gacttcggct tcacggccgg tgagttgcag ggtttgctgg aggagttgct
     1561 cgtcgccgcc ggcggtgact tcggcgaggc ggaagaggag ctcgtcgggg ccgatggagc
     1621 tcaggaaaga cagctcgatg cggcggccac cgacttccag gcaggcgcgg gcggttgact
     1681 tcgcggcagg ttggcgcagc tgtttgatct gttcgatgac ggcgggcggc aggctcgggc
     1741 cctggccggc gaccgcgggg aagagctcgg ccaggagttg tttggctttg ggtgtgcacc
     1801 agagcaggcg ggcggcctgg tcggtggcca ggaggaagcg tccggtggca tcgagagcga
     1861 cccgggtgcc gtgcgcgatt cgggcgttcg tcaggtgcac acggatgcgg gccaacaact
     1921 cttcgacgat gatgggcttc gttacatagt cgacgcctcc ggcgacgagg ccctggacta
     1981 catgctcggt ttcgctcagg cccgtcatga aaaccacggg gacgtgcgag aggagttttt
     2041 cgtttttcaa gcggcggcag gtctcgaagc cgtccatccc gggcatgagg gcgtccatga
     2101 gcacgaggtc gggtgtgatc tggtccacga gcgccagggc gctttcaccg tcggtcgcga
     2161 tgagcacggt gaagccggcg tcatccagtg tgtccgtgag aaatcccaac gtctccggtg
     2221 tgtcgtcgac aaccaggatc gtgtccctgc gtgtggtggc ctcaaccatg tttctgcatc
     2281 gattcgagga cggtcatgta gcgtttcagg tcgaagttcg agatgaagct gcgtaaatgg
     2341 gctgcgaacg ggccgttcgc cgggtgttcg gcttccatct cacgcaactt cgcctcgatg
     2401 ccgcgaacgt ggccgatgcg gcccagttcg tagagagcgc ctatgtgggc cagacattgc
     2461 tccggtggtt tttcgtgaag gttagtagct gcggggctac tgcccgcaac ctgcggagct
     2521 tcatacaccc actcgagttg caggagtgag ccgacacatt ccagtagcag atcgatgtcg
     2581 atgggtttga cgaggaacgc gtcgtgcagc gggccgccgc ccccgccggg gctgtattcg
     2641 taggcgttcg ccgacaccat ggcgatcttt ggatgacgtt cacctgcgct cgccgctcgg
     2701 agctcgcgga cgacgtccca acctgtcatg tcgggcagcg aaatgtccaa tagcgcaagg
     2761 tccggggagt ggtgggccgc cagctcgagg ctggagcggc cgtcgtgggc tggtaacagg
     2821 atgaaatcca aaggcgccag cacattctgc agcaacccga ggtgcgacgg atcgtcgtcc
     2881 gcgagcagga tggtacggcg gggaccggcg tatccgtgta ctcgacgtct ggccggtgtc
     2941 tcggcgagat cgtgtgtggc ctgcgacagg agcaaccgaa cgacgaatgt cgtgccttcg
     3001 ccgagagtgc tgcggacgag aatttcgccg cccatgatct gggtcaacag ttttgtaatc
     3061 gtgaggccga ggcccgtgcc gggaagtgag cgcaccgcgt gcgcgcgccc gcgctcgaag
     3121 ggttcgaaca cccgctcgag gtcctctgtc gggattccca tgccggtgtc cgcgatctcg
     3181 aattcggcga cctcgcttcg atagcggatc gtgaggcagg cgtggccgct ttcggtgtat
     3241 ttgatcgcgt tcgacagcag gttgatcagg atctgtcgta gacgcttctg gtccgtgtgg
     3301 acacaggcgg ggaggttggc cggcggttta tagcggaagg cgatgccttt tgcggcggcc
     3361 tgcaggctga acatgtcgac cagttggtcg aggaattccg gcagccgcac cttgtcgcga
     3421 ttcaggcgca gcaggccgtt ctcgatgcgg gaaatgtcga gaagaccgtc gaccaggttg
     3481 gcaagatgct ccgagctgcg ccggatgaca cgtgcggcgt tttctggcgg gatggcggcg
     3541 ccccgctcga ggagctgggc gtagccgaag atggagttca gtggcgtgcg gatttcatgg
     3601 ctgatgccga cgacgtaacg ggtcttggcg acgttggccg cttcggccac ttctttggct
     3661 ttctggagcg cggcgtcagt gcgcttgtgc gcttcgattt cctccatgag catcgccgtc
     3721 tggcgcgccg actcctgttc ggcggtgcgc cgactttcgt gggcgagcac agtgagccag
     3781 gcgccgacgc cggacagtat gagcaggcac aggaatacca gccatagggt cgtgctgatg
     3841 acctcgcgcc cggcgggagc tattccgctg tactgacggt agatgaatga gagcagcagc
     3901 acgacgatga cgttgaagaa caggagtagt ccgatgaagt gaccggcgcg cgtgttgagc
     3961 gacgccgcca cttttaccgg gaggactttc ttcaggaagg atgcgagttg ctcggtgaag
     4021 cggctgtcgg tcttgcacag atcccggcaa cgggcttcga gcgtgcaaca cagcg
//
LOCUS       DATAVD010000929         3217 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_90825, whole genome shotgun sequence.
ACCESSION   DATAVD010000929 DATAVD010000000
VERSION     DATAVD010000929.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3217
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90825"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            327..803
                     /locus_tag="VHX39_17860"
     CDS             327..803
                     /locus_tag="VHX39_17860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993041.1"
                     /translation="MDTEAIRAALTGAYDASAPPEQRVRNTRDLLRKRGTEAFQIPPG
                     QIPPGPGIALDEILRIAIGKSPTDARREFAVMLVYAIGIEGVLPMRGETERLIRSFLE
                     QALLNPLRRAGYPFDGTAYDKRQALAGLHATIEEHLRPLEPTMPRWLHGSGSQGRD"
     gene            complement(825..1499)
                     /locus_tag="VHX39_17865"
     CDS             complement(825..1499)
                     /locus_tag="VHX39_17865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010667033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEX3993042.1"
                     /translation="MIELDIAISDNLRQVRERIANAAIRSGRKPEDVTLVAVSKTKPA
                     SAVEAALAAGQTVFGENRVQEAAEKFPALRARHKFSLHLIGGLQTNKARDAVRIADVI
                     ETLDRPRLADAIAAAMAKEGRRPGLLIEVNTGGEAQKSGVPRADADAFITDCKSRFGE
                     GFLGLMCIPPHGEDPRPHFTWLADRAARHGLKVVSMGMSADYEIAIECGATLVRVGTA
                     IFGGRG"
     gene            complement(1496..1702)
                     /locus_tag="VHX39_17870"
     CDS             complement(1496..1702)
                     /locus_tag="VHX39_17870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993043.1"
                     /translation="MACSVPIYYLLHREAADGSEGMLMEPDLASALADASDPAWRPVR
                     ITFGRQIVLEGEALATAIAERHGT"
     gene            complement(1816..>3217)
                     /locus_tag="VHX39_17875"
     CDS             complement(1816..>3217)
                     /locus_tag="VHX39_17875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="RND transporter"
                     /protein_id="HEX3993044.1"
                     /translation="ELGLIAGGGMLIAFACTLTFLPATISLFNPRDEAAEVGFSWARP
                     LDGRIQANHAWLLGGFIAFAALAVAVSPRLTFDSNPLHTKNPNTEAMRTLQDLIDNPV
                     TNPYTIDIVAPDAKAADALVQRLKTLPTVSQVRDIDSFVPQDQDQKLALIDDARSILA
                     ATLAAAPPAAPITADQVRLAARVALSQIEPALPKLPKDSPLAAVATDLHGLTDASDAV
                     AMEANAELTRFLPLQLDHLRASMSATKVTRADIPADIANDWVLPDGRARLQVLPKPNL
                     AELGGLKEFVAQVLSVAPDAGGSAVTIVSTSATIVGAFRTAAVSALVAILLILWLILR
                     RPLDVMLVAAPLVLSALLTLYVAVLLGLPLNFANIIALPLLLGVGVSFNVYFIMNWRA
                     GRSGVLGSATARAVLFSALTTGTAFGSLALSAHPGTASMGVLLLISLGCTLLASLVFV
                     PSVLAALGSPRQRSYR"
BASE COUNT          634 a         1061 c          991 g          531 t
ORIGIN      
        1 cagcacggcc gcctggttgg agacgaaagc gcctcgtacc gctgtgcgcc tgtggcgatc
       61 ccagatcgtg atattggaca agaagatgcc ctcgccgacc ggagacacta aatagcgcaa
      121 aagggaccgg cggctgcccc ggcttcattc gtcggcttcg tcgctgttac ggcgcgatca
      181 gactgctcgg gtcggtgcat cgaaaaccaa gactttcggc cacttcgcga ttgccttgcc
      241 gggccaaacc gggcgcggca tcatgccgat catggggccg tcgagcgcat ctacctcggg
      301 attgggtcgc tgcatggatg caaggcatgg acactgaggc gattcgagcc gcgctgacgg
      361 gtgcatacga cgcctccgct ccgccggaac agcgtgtgcg aaacacccgc gacctgttgc
      421 gcaaacgcgg caccgaggct ttccaaattc cccccggaca aattcccccc ggaccgggga
      481 ttgcactcga tgagattctg cggatcgcaa tcggcaaatc gccaaccgac gcacggcggg
      541 aattcgctgt catgttggtc tatgcgatcg gcatcgaggg cgtgctgccg atgcgtggcg
      601 aaaccgaacg tctgatccgg tcgtttctcg agcaggcgct gttgaacccg ctccgtcgtg
      661 cgggttaccc gtttgacggc acagcgtacg acaaacgtca ggctctggcc ggtttgcacg
      721 cgaccatcga ggagcatctc cggccgctcg aacccaccat gccccgctgg ctgcatggca
      781 gcgggtcgca aggcagggac taaagctcct tcccagaaac gacttcagcc acgcccgccg
      841 aaaattgcgg tgccaacacg aaccagggtc gcgccgcatt caatggcgat ctcataatcg
      901 gcagacatgc ccatcgatac gaccttaagt ccatgccgcg cggcacgatc cgccagccag
      961 gtaaaatgcg gacgcgggtc ctcgccgtgc ggcggaatgc acatcaagcc cagaaatcct
     1021 tcgccaaacc ggcttttgca atcggtgatg aacgcatcgg catcggcgcg cggaacgcct
     1081 gatttctgcg cctctccacc ggtgttcact tcgatcagca agcccggccg gcggccttcc
     1141 ttcgccatcg ccgcggcgat cgcatcggcc agccgaggcc gatccaacgt ctcgatcacg
     1201 tcggcaatcc gcacggcgtc gcgcgctttg ttggtctgca ggccaccgat caaatgcagg
     1261 ctgaatttgt gcctggcgcg caacgccggg aacttctcgg ccgcttcctg cacgcggttt
     1321 tcgccgaata cggtctgtcc ggcggccaag gcagcttcga ccgcgctggc cggtttggtt
     1381 ttggacacgg caaccagggt gacgtcctca ggcttccggc cggaccggat cgcggcgttg
     1441 gcgatgcgct cccgcacctg gcgcaggttg tcggagatgg cgatgtccag ctcgatcatg
     1501 ttccgtgtct ctcggcgatg gcggttgcca gagcctcgcc ttccagcaca atttgccggc
     1561 cgaaggtaat ccgcaccggc cgccatgccg ggtccgacgc gtcggcgagc gccgatgcca
     1621 gatcgggctc catcaacatc ccctccgacc cgtcagccgc ttcccggtgc agcagatagt
     1681 aaatcggcac ggagcaggcc atcggcggtt tccttccacg taaccctgat gcgaccaaca
     1741 aagattgctt cgcttcccac gcgatgacaa cgccgatcac gcgcaatgac aataccagtc
     1801 agctcggttg cgccgtcacc gatagctccg ctgccgcggc gagcccagag cggccaacac
     1861 cgacggcacg aacaccaaac tggcgagcag cgtgcagccc agactgatca gcagcaacac
     1921 acccatgctc gcggttcccg ggtgagcgga caatgccagc gaaccaaacg cggtgccggt
     1981 cgtgagtgct gaaaacaaca ccgcccgcgc cgttgccgaa cccagcacgc cgctgcggcc
     2041 cgctcgccag ttcatgatga aatagacgtt gaacgacacg ccgacgccca ggagcagcgg
     2101 caaggcgatg atattggcaa aattcaacgg caagcccaga agcacggcaa cgtaaagcgt
     2161 cagcaacgcc gacagcacca acggcgcggc caccaacatc acgtcgagcg gccgtcgcag
     2221 gatcagccac aggatcagca ggatcgccac cagagcactg accgcggcgg tccggaacgc
     2281 gccgacgatc gtcgcgctgg tggaaacgat agtgaccgca gacccgccgg catcgggtgc
     2341 gacgcttaac acctgcgcca cgaactcttt cagaccgcca agctccgcca ggttcggttt
     2401 cggcagcacc tgcaaccgcg cgcggccatc gggcaacacc caatcgttgg caatatcggc
     2461 aggaatgtcc gcccgcgtta ccttggtggc actcatcgag gcgcgcagat gatcgagttg
     2521 cagcggcaga aaccgcgtca gttccgcgtt ggcctccatt gccacggcat cggacgcatc
     2581 ggtcaggcca tgcagatcgg tggccacggc ggcgagcgga ctgtccttcg gcagctttgg
     2641 cagcgccggt tcgatctgcg acagagccac ccgcgccgcc agccggacct gatccgcggt
     2701 gatcggtgcg gcaggcggcg cggcggccaa agtggccgcc aggatgcttc gcgcatcgtc
     2761 gatcaacgcg agcttctggt cctggtcctg cggcacgaaa ctgtcgatgt cgcgcacctg
     2821 cgacaccgtc ggcaaggtct tcagacgttg gaccagggca tcggcggcct tcgcatccgg
     2881 cgccacgatg tcgatcgtgt aagggttcgt caccgggtta tcgatcaggt cctgcaaggt
     2941 acgcattgct tcggtgttgg gatttttggt gtgcaacggg ttggaatcga acgtcagccg
     3001 tggcgacacg gccaccgcga gtgccgcgaa agcgataaag ccgcccagaa gccaggcatg
     3061 attggcctgg atccgcccgt ccagcgggcg agcccaggag aagccgactt cggcggcctc
     3121 gtcgcggggg ttgaagaggg agatggtggc aggaagaaag gtcagggtgc acgcaaacgc
     3181 aatcaacatg ccgccgcccg cgatcaggcc aagttcg
//
LOCUS       DATAVD010000930         2210 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_647881, whole genome shotgun sequence.
ACCESSION   DATAVD010000930 DATAVD010000000
VERSION     DATAVD010000930.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2210
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_647881"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1010)
                     /locus_tag="VHX39_17880"
     CDS             complement(<1..1010)
                     /locus_tag="VHX39_17880"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX3993045.1"
                     /translation="MQGLDTTIVNVSLPFIQGSLSATQDQISWILTSYIVASAIAMPL
                     TGWLAARFGIKPVFLASVIGFTITSALCGVATGLNQLVVYRLLQGICSAGLVPLGQST
                     LFTIYPRERHGFAMAIFASGSMMGPIVGPTLGGWLTDAYGWRWCFYINLPVGAICAFA
                     LFVLLRPGSGRKFEQFDLFGFGALSIAVGALQLMLDRGQDNDWFHSTEIWIEATVSAL
                     SFYLLFVHTLTTGTRSFLNRGLLTNRNFIAGSLLMFGVGVLLSGTVALMPSMMQVLLN
                     YPVFDTGWMMAPRGFGTLLAMLVVGQLINRVDYRVFIMVGFLLTAASLWQMTGWSLDM
                     GSG"
     gene            complement(1127..1873)
                     /locus_tag="VHX39_17885"
     CDS             complement(1127..1873)
                     /locus_tag="VHX39_17885"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX3993046.1"
                     /translation="MVGRNYSYQQGSSVHVFFDDREFNPFIGGGQLNTSIDELNGDVI
                     DRGPLGFIGGAYVNTSARGAAPIKGKVVPPGTPRWGGEWKKAVAHNYRRNLAITSHAT
                     CLSYRHNYLDLDPTYKDAYGLPLLRMTFDWNDNELRMMKYIDERCTEIGRALNGSGLS
                     GKSKGTHFGITGYQSTHNVGGAVMGTDPKTSVVNKYLQSWDVSNLFVVGGSAFPQNPA
                     NGPTETIGMLACWAADAIKENYVRSPGSLV"
     gene            1976..>2210
                     /locus_tag="VHX39_17890"
     CDS             1976..>2210
                     /locus_tag="VHX39_17890"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3993047.1"
                     /translation="MLPALTRQPTFELRPLCNVLRINTDSTGKKATGVTYIDARGNEV
                     EQPADIVVLGAYCFSNTRLMLLSGIGTPYDPRTG"
BASE COUNT          462 a          702 c          660 g          386 t
ORIGIN      
        1 ccggacccca tatccaggga ccagccggtc atctgccaca gcgacgcggc cgtcagtagg
       61 aagccgacca ttatgaacac gcggtagtcg acgcgattga tgagctggcc gaccacgagc
      121 atggccagca acgtgccgaa cccccttggc gccatcatcc agccggtgtc gaagaccgga
      181 taattcagca gcacctgcat catcgaaggc attaaagcca ctgtgccgct gagcagcaca
      241 ccaacaccga acatcaagag actgcccgcg atgaagttac ggttcgtcag caatccgcga
      301 ttgagaaacg accgggtccc ggttgtcagg gtgtgaacga acagcaggta gaagctcagc
      361 gccgaaaccg tggcttcgat ccagatttca gtagaatgga accagtcatt gtcctggccg
      421 cgatccagca tcagttgcag cgcgccgacg gcgatgctca atgcgccaaa gccgaacagg
      481 tcaaattgct cgaattttcg cccggaccct gggcgtagca ggacaaagag ggcgaacgcg
      541 caaatcgcgc caaccggcag gttgatgtaa aagcaccagc gccagccgta agcgtcggtg
      601 agccatccac caagcgtagg accgacgatc ggccccatca tcgagccgga cgcgaagatc
      661 gccatcgcga agccgtgcct ctcgcgcggg tatattgtaa acagcgtcga ctgaccgagc
      721 ggcacgagac cagcgctgca aatgccttgc agcaggcgat acaccacaag ctggttgaga
      781 ccggttgcaa ccccgcaaag cgccgaggtg atcgtgaaac cgatcaccga ggcgagaaag
      841 accggtttga tgccgaaacg ggcggcgagc cacccggtca gcggcatcgc gattgccgag
      901 gccacgatgt aggacgtcag aatccacgag atctggtcct gggtcgcaga gaggctgccc
      961 tggataaatg gcagcgaaac gttcacgatc gtcgtatcga ggccctgcat gacgcaggca
     1021 cagatgattg cggccgttgt caggccgcga aaggcagcat ccgggtcggc ggcaggcgtt
     1081 cctgccgggc tccgggccgg cgctttctcg agttccgtgt cgctgttcag accaaagacc
     1141 ccgggctccg aacataattt tccttgatcg catcggccgc ccaacaggcc agcatgccga
     1201 tcgtctcggt cgggccgttc gcggggttct gcgggaacgc actgccgccc accacgaaca
     1261 gattcgaaac gtcccacgac tgcaggtatt tgttcactac gctggtcttc ggatcggtgc
     1321 ccatcacggc gcctccgacg ttgtgcgtgc tctgataccc cgtgataccg aaatgcgtgc
     1381 ccttgctctt gccgctcaga cccgaaccgt tgagcgcgcg gccgatttcg gtgcagcgct
     1441 cgtcgatgta cttcatcatg cgcaattcgt tatcgttcca gtcgaacgtc atgcgtagca
     1501 gcggcaggcc gtaagcgtcc ttgtaggtcg gatccagatc gagatagttg tgccggtagc
     1561 tcagacaggt ggcgtgactg gtgatcgcca ggttgcggcg gtagttatgc gccacggctt
     1621 tcttccattc gccgccccaa cgcggcgtgc cgggtggcac caccttgccc ttgatcggcg
     1681 ccgcgccgcg cgccgaggtg ttgacataag cgcccccgat gaaaccaagc gggccgcgat
     1741 cgatcacgtc gccgttcaat tcgtcgatcg atgtgttgag ctggccgccg ccgatgaacg
     1801 gattgaactc gcgatcgtcg aagaacacgt gcaccgagct gccttgctgg tacgaatagt
     1861 tgcggccgac cacgcctttg ccggtcagcg gatcgtacgg cgtgccgatg cccgacagca
     1921 gcagcagcct cgtgttgctg aagcaatagg cgccaaggcc aatcccctga cctcggtgct
     1981 ccccgcgctc acccggcagc cgaccttcga gttgcgcccg ctatgcaacg tattgcgcat
     2041 caatacggat tccaccggca agaaggcgac cggcgtcacc tacatcgacg cccgcggcaa
     2101 cgaggtcgaa cagccggccg acatcgtcgt gctcggcgcc tattgcttta gcaacacgcg
     2161 gctaatgctg ctgtcgggca tcggcacgcc ctacgatccg cgcaccggca
//
LOCUS       DATAVD010000931         1943 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1950351, whole genome shotgun sequence.
ACCESSION   DATAVD010000931 DATAVD010000000
VERSION     DATAVD010000931.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1950351"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            117..347
                     /locus_tag="VHX39_17895"
     CDS             117..347
                     /locus_tag="VHX39_17895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007284348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit C family protein"
                     /protein_id="HEX3993048.1"
                     /translation="MDLASAKAIGAGIAVIALAGVGVGIGHIFAALISGVARNPAARD
                     RVFGLAILGFALTEAVALYALVIAFIILFAGG"
     gene            372..965
                     /locus_tag="VHX39_17900"
     CDS             372..965
                     /locus_tag="VHX39_17900"
                     /inference="COORDINATES: protein motif:HMM:NF012645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B'"
                     /protein_id="HEX3993049.1"
                     /translation="MSVIRRIVAHLAWISATALAVPGVARADTLPQMDFANVLTSYQV
                     LWGAVIFLILYILASYTALPKVGAVLEARAKRIAGDLEDAKDTKARADAGIQAAADAT
                     AKARSEAQTAINAALESSKQAAATQSAALNERLDKQLKEAEGQIAAASAAALEALPGV
                     AIETAVTLITRLTGSVPDTVRLSDAINAAMAARGASR"
     gene            979..1494
                     /locus_tag="VHX39_17905"
     CDS             979..1494
                     /locus_tag="VHX39_17905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEX3993050.1"
                     /translation="MHEEPGFFAEPRNWVVIAFFLFFILFGKKLWGALAGMLDARAAS
                     VRAELDEAARLKSEAQAMLKEAEAARAKAQADATRLIDGAAAEAARVAEASRAETEAA
                     ARRREQMALDRIAAAQKQAVADVRSAAAELATIAARQVIAEGLSPESSAALIDQAIAR
                     LPAALATRRAA"
     gene            1569..>1943
                     /locus_tag="VHX39_17910"
     CDS             1569..>1943
                     /locus_tag="VHX39_17910"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3993051.1"
                     /translation="MTANFDLSGRLALVTGSSRGLGLAIARGLAAAGASVLLHGRDVA
                     RLQACVRDLPHAVGFLAFDVSDTQATNDAFARIKAEHGKLDILVNNAGVIPRKPLLET
                     TDADWASVIDSNLSAYFRLAREA"
BASE COUNT          345 a          587 c          665 g          346 t
ORIGIN      
        1 tgcatctatc tgcacgacgc ggtgcacctg cactgatcat cccgcaatct ccgaatgaca
       61 ggcccagagg ctcaggctgc ctggacctga tggaatgtaa cgaaaggaac tgacaaatgg
      121 atctggcttc cgcgaaagca atcggcgcgg gtatcgcggt catcgcgctg gccggtgtgg
      181 gcgtgggtat cggccacatc ttcgcggcgc tgatctccgg cgtggcgcgc aacccggcgg
      241 cacgtgaccg cgtctttggt ctggccattc tcgggtttgc gttaaccgaa gcggtcgcgc
      301 tgtacgcgtt ggtcatcgcg ttcatcattc tgttcgcggg cggctgaacc gccaccgcga
      361 gaggacgcag catgtccgta attcgccgga tcgtggcgca cctcgcctgg atttccgcta
      421 ccgcattggc tgtcccgggt gtcgcgcggg cggataccct gccgcagatg gacttcgcca
      481 atgtgctcac gtcgtaccag gttctctggg gcgcggtgat cttcctgatc ctctacattc
      541 tggcgtcgta caccgcgttg cccaaggttg gagcggtttt ggaagcgcgg gcgaaacgga
      601 tcgccggcga tctggaggac gccaaagata ccaaggcgcg tgccgatgcc ggcatccagg
      661 cagcagcgga tgccaccgcg aaagctcgat ccgaagccca gacagcgatc aacgccgcgc
      721 tcgagtcgtc gaagcaggcg gctgccactc agtcggcggc cctgaacgag cggttggaca
      781 aacaattgaa ggaggccgag ggccagatcg ccgcggccag tgcggcggct cttgaggctc
      841 tgcccggggt ggcgatcgag acggccgtca ctttgatcac gcggctgaca ggatcggtgc
      901 cggacacggt cagactgagc gatgcgatca atgcggccat ggccgcgcgt ggcgccagcc
      961 ggtagggggg gaaagccgat gcacgaggaa ccaggctttt tcgctgaacc caggaactgg
     1021 gtcgttatcg cattcttttt gtttttcatc ctcttcggaa aaaagttgtg gggtgcgttg
     1081 gccggcatgc tggacgcgcg cgccgcatct gttcgtgcgg aactggatga ggctgcccgc
     1141 ctgaaaagcg aagcccaggc gatgttgaag gaagcggaag ccgcgcgggc aaaagcccag
     1201 gcagatgcga cgaggctgat cgacggtgcg gcggcagagg cggcccgggt cgccgaggcg
     1261 tcgcgtgccg agaccgaggc ggcagcgaga cgccgcgagc aaatggcatt ggaccgcatt
     1321 gccgccgcgc agaagcaggc ggttgcagac gtgcgcagtg ccgcggccga attggcgacg
     1381 atcgccgccc gccaggtgat cgccgagggc ctgagccccg aatccagtgc cgcgttgatc
     1441 gaccaggcaa tcgcgcggtt gccggctgcg ctggcgactc gccgggcggc ctgactgctg
     1501 tcggccgcag cagaggcccc gacccaagcg ttgacacggc gaaaagcgtc ccgcaccaat
     1561 ccgggatcat gaccgcgaat ttcgatcttt ccggacggtt ggctctggta accggcagtt
     1621 cccgcggtct tggactggcg atcgcacgcg gtctggcagc ggccggggcg agcgtattgc
     1681 tgcatgggcg cgacgtcgct cgattgcagg cgtgcgtgag ggacctgccg catgcggttg
     1741 gctttctggc cttcgacgtt tcggatacgc aagcgacgaa cgatgcgttt gcacgaatta
     1801 aggctgagca cggaaagctg gacattctgg tcaacaacgc cggcgtgatc ccgcgcaagc
     1861 ccttactcga aaccaccgat gccgactggg cttccgtcat cgactccaat ctgtcggcgt
     1921 attttcgcct ggcgcgcgag gcg
//
LOCUS       DATAVD010000932         5708 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2881398, whole genome shotgun sequence.
ACCESSION   DATAVD010000932 DATAVD010000000
VERSION     DATAVD010000932.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5708
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2881398"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(342..758)
                     /gene="rplS"
                     /locus_tag="VHX39_17915"
     CDS             complement(342..758)
                     /gene="rplS"
                     /locus_tag="VHX39_17915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEX3993052.1"
                     /translation="MNIIQQYEAEQMASLTAARAVPEFVPGDTVRVAVKVVEGDRTRT
                     QAFEGVCIARSNKGLNSNFTVRKISYGEGVERVFPLYAPTIAEITVIRRGDVRRAKLY
                     YLRGRRGKSARIAEKARSIVNTTEPTPTAAETPAAE"
     gene            complement(755..1474)
                     /gene="trmD"
                     /locus_tag="VHX39_17920"
     CDS             complement(755..1474)
                     /gene="trmD"
                     /locus_tag="VHX39_17920"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010667941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEX3993053.1"
                     /translation="MSWRASVLTLFPEMFPGPLGYSLAGKALENRIWSLETIQIRDFA
                     SDRHHSVDDTPFGGGAGMVLRPDVIDAALNDAADGRPILCLTPRGRRFAQADAVRLAG
                     GDGAILLCGRYEGIDQRVIDDRNMDEVSLGDYVLSGGEPAALVLLDAVIRLLPGVMGA
                     ADSATEESFSQFLLEYPHYTRPAEWHGRHVPDVLLSGHHAAVASWRRGQSEQATQERR
                     PDLWAAHIAASPEPVTKGRLK"
     gene            complement(1471..2004)
                     /gene="rimM"
                     /locus_tag="VHX39_17925"
     CDS             complement(1471..2004)
                     /gene="rimM"
                     /locus_tag="VHX39_17925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013220.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEX3993054.1"
                     /translation="MSDRPILLGVIGRAHGVRGLVRVTSHTAEPVALTEYGPLSDASG
                     RQFTLRWASEGIAEIFVNVDGELVRIADRTAAERLTNTQLFIARDRLPAPDPDEYYLT
                     DLIGLRAFGPDDAPAGVVTAVHDYGAGVSLELARDDGGSLLVPFTAACVPEVDVAAGR
                     LLVAPPNEIDVPAEAAA"
     gene            complement(2006..2350)
                     /gene="rpsP"
                     /locus_tag="VHX39_17930"
     CDS             complement(2006..2350)
                     /gene="rpsP"
                     /locus_tag="VHX39_17930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007283494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEX3993055.1"
                     /translation="MGLKIRLARAGAKKRPYYHIVVADSRSPRDGRFIEKLGSYNPML
                     PAEHADRVRLQPERIQHWISNGALATERVAKFLGHAGLAPMPVWKEQPIQSAPKKKAQ
                     ERAKAAEAAAAG"
     gene            complement(2372..3751)
                     /gene="ffh"
                     /locus_tag="VHX39_17935"
     CDS             complement(2372..3751)
                     /gene="ffh"
                     /locus_tag="VHX39_17935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEX3993056.1"
                     /translation="MFEALSDKLNGVFDRLRSRGTLNEMDVAEALREVRLALLDADVA
                     LPVVRDFITKVRDRAIGVEVLQSVSPGQQVIKIVNDVMIEQLGGVGAVPINLTAVPPV
                     PILLVGLQGSGKTTTAGKLALRFRERLRKKVLLASLDTQRPAAQLQLQQLAEQARVPS
                     LPIIAGQTPVQIAQRAMDTGRREGYDIVLLDTAGRLSINEALMAEVSEIRAATNPAET
                     LLVVDAMTGQDAVNTAKAFNDAVGVTGIVLTRMDGDARGGAALSMRAITGAPIKLVGV
                     GEKQDAIEDFHPERVAGRILGMGDIVGLVEKAAETIDQDEAEKLAAKMMRGKFDLEDF
                     AQQLKQIAKMGSLTGILGMLPGVGKIKQQLENADLDNTILKRQAAIISSMTMKERRVP
                     DIIKASRKKRIAAGSGTSVQEVNKLLKQFDDMTTVMKRMNKMGQKGLMRNGLAGLMPK
                     GMGQQRRPY"
     gene            4033..4800
                     /locus_tag="VHX39_17940"
     CDS             4033..4800
                     /locus_tag="VHX39_17940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004272015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEX3993057.1"
                     /translation="MNDRLHSTQSRRLTLRQCFPIAITGSARQHVAVVEEAMVGRVRV
                     AAFSLSLDGFGAGQEQSLQDPLGKRGTELHSWFFGTKTFKAMFGQGGGSEGVDETFAH
                     RSMDGFGAFILGRNMFGPVRGEWLDDSWKGWWGDNPPYHAPTFVLTHHAREPIVMEGG
                     TTFHFVTDGIHAALERARDAAGARDVKIGGGVSTVRQYLQAGLIDELHFAFSPVLLGR
                     GEAMFEGLDLPALGYRVKESTATDLATHVVLGRQENE"
     gene            complement(4916..>5708)
                     /locus_tag="VHX39_17945"
     CDS             complement(4916..>5708)
                     /locus_tag="VHX39_17945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008495487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HEX3993058.1"
                     /translation="LSPFEMDGGTVSLVTAKLRRASFAARMVDLFGASVFATPRLAVA
                     EALFAVARYQIEDPSFHPYTSKFDYWLEGKTRLTQEELRGYRLFNNPDKANCGGCHLD
                     QPRPDGLPPLFTDGQYEALGAPRNPALAANADSRYFDLGICGPYRTEMRSETQFCGMF
                     LTPTLRNVATRSVFFHNGVFHSLQEVQDFYNYRDTEPGRIYPRAPDGKVAQFNDIPAR
                     FLGNVDVVDPPFDRSLGDQPAMTPQEEDDIIAFLKTLTDGYWPDQ"
BASE COUNT         1025 a         1819 c         1790 g         1074 t
ORIGIN      
        1 cgccgcgttc acggtttacc agacggatct tgagggtcag accagactgt tcagtatcgg
       61 gcagtatctg gatgtcatca cgttcgctga cggcgagccg ctgttccgcg agaaactcgc
      121 gatttgcgat acgtttagta ttccaaacct gttggcgatt ccgctgtagg acacacaatc
      181 agtgttcccg tttcgtcatc cgcgtgcctg gcacgcggtt caacaccttg ccgcgatcgg
      241 tccacggtac cagcccgcag atgacgattg agtggatcac aattcaacaa ttccgggtac
      301 catgaccccg accgttccga agcggccgga cccgcgacgg gttattcagc cgcgggcgtt
      361 tctgccgccg tcggcgtcgg ctcggtcgtg ttcacgatgg aacgggcctt ctcggcaatg
      421 cgggcggact taccgcggcg gccacgcagg taatacaatt tggcgcgacg cacatcgcct
      481 cggcgaatga cggtgatttc agcgatcgtc ggggcataga gcgggaacac gcgctccacc
      541 ccctcgccat agctgatctt acgcacggta aaattgctgt tcaggccttt gttcgagcga
      601 gcgatacaca ccccctcgaa cgcctgcgtc cgggtccggt cgccttcgac caccttcacc
      661 gccacgcgca cggtatcgcc tggaacgaat tcgggcaccg cacgagcggc ggtgaggctg
      721 gccatctgct cggcctcata ttgctggatg atgttcattt caggcgtcct ttcgtaaccg
      781 gctctggcga ggccgcgatg tgagcagccc acaaatcggg gcggcgttcc tgggtagctt
      841 gttcggattg gccgcggcgc catgaagcga ccgcagcatg atgaccggaa agcaagacat
      901 ccggcacatg gcggccgtgc cactccgccg gtcttgtgta gtgcgggtat tccagcagga
      961 actgggaaaa actttcctcg gtagcactgt cggcggcgcc catcacaccc ggcaacagcc
     1021 ggatgacggc gtccagcaag accagcgcgg ccggttcacc gcccgacagc acgtaatctc
     1081 cgaggctgac ttcatccatg ttgcggtcgt cgatcacgcg ttgatcgatg ccctcgtacc
     1141 ggccgcacaa caggatggcg ccatcgccgc cggcgaggcg aaccgcgtcc gcctgggcga
     1201 accgccggcc gcgcggggtc aggcagagga tcggccggcc gtcggcggca tcgttcaagg
     1261 cggcatcgat cacgtcaggc cgcagcacca tgccggcgcc accgccaaac ggcgtgtcgt
     1321 ccaccgaatg atgccgatcg ctggcgaaat cgcgaatctg aatggtttcg agcgaccaga
     1381 tccggttctc cagcgccttg ccggccagcg aataaccgag cggtccggga aacatctccg
     1441 ggaacaacgt caggacggag gcgcgccagc tcatgccgcc gcctccgccg gtacgtcgat
     1501 ctcattcggg ggtgccacaa gcaaccggcc ggccgccacg tcgacctcgg gcacgcaggc
     1561 ggcggtgaac gggaccagca acgatccgcc gtcatcgcgg gcgagttcca gactgacacc
     1621 ggcgccataa tcatgcaccg ccgtaacgac accggccggc gcatcatcgg ggccgaacgc
     1681 ccttaggccg atcaaatcgg taaggtaata ttcgtcggga tcgggagccg gcaaccggtc
     1741 ccttgcgatg aacagctggg tattggtcag ccgctccgcc gcggtgcggt cagcgattct
     1801 gaccagttcg ccgtcgacat tcacaaaaat ttccgcgatg ccttcgctgg cccagcgcaa
     1861 ggtaaactgc cgccctgacg cgtcggataa cggcccgtac tcggtcagcg ccactggttc
     1921 ggcggtgtga ctggtcactc gcacgaggcc gcgcacgcca tgcgcacggc cgattacgcc
     1981 caacaggatg ggacgatcgg acaagtcagc ctgctgccgc ggcctcggcc gccttggcgc
     2041 gttcctgcgc cttcttcttg ggtgcagact ggatcggctg ctccttccag accggcatcg
     2101 gcgcgaggcc cgcgtgaccg aggaactttg cgacacgttc ggtggccagc gcgccgttgc
     2161 tgatccaatg ctggatccgt tccggctgca aacggacacg atcggcgtgt tcggccggta
     2221 gcatcggatt gtacgagccg agtttctcga tgaaacgtcc gtcgcgcgga ctgcggctgt
     2281 cggccacgac aatgtggtag tacggacgtt tctttgcccc ggcgcgggcg aggcgaatct
     2341 tgagacccat gtgcgacttg ctcctttaag ttcagtacgg ccggcgttgt tgtcccatgc
     2401 ctttcggcat caaacccgcc aaaccgttac gcatgaggcc cttctggccc atcttgttca
     2461 tgcgcttcat gacggtcgtc atatcgtcga actgcttcag cagtttgttc acttcctgca
     2521 ccgaagtgcc ggaaccggca gcaatacgct tcttccggct ggccttgata atgtcgggca
     2581 cccggcgctc cttcatcgtc atcgacgaaa tgatcgcggc ctgacgtttc aggatcgtat
     2641 tgtcgagatc tgcgttttcc agttgctgtt tgatcttgcc gacccccggc agcatgccaa
     2701 gaattcccgt caggctgccc atcttggcaa tctgcttcaa ctgctgggcg aaatcctcaa
     2761 gatcgaactt gccgcgcatc attttggcgg cgagtttttc ggcttcgtcc tggtcgatgg
     2821 tttcggcggc cttttcaacg aggccgacga tatcgcccat gcccaggatg cggccggcga
     2881 ctcgctcggg gtggaagtct tcgattgcgt cttgtttctc accgacaccg accagcttga
     2941 tcggggcacc ggtgatggca cgcatcgaca gcgcggcacc gcctcgggcg tcgccgtcca
     3001 tgcgggtcag cacgatgccg gtaacgccca cggcatcatt gaaggccttg gcggtgttga
     3061 ccgcgtcctg gccggtcatg gcgtcgacca ccagcagagt ctcggccggg ttggtggcgg
     3121 cgcgaatttc cgacacctcg gccatcaggg cttcattgat cgacaggcgg ccggcggtgt
     3181 cgagcagaac gatgtcgtag ccctcgcgcc ggccggtatc catcgcgcgt tgggcgattt
     3241 gcaccggggt ctggccggcg atgatcggca gcgacggcac gcgcgcctgc tcggccagtt
     3301 gctgcaattg caactgcgcg gcgggccgct gggtgtcgag gctggcgagc aggacctttt
     3361 tccgcaaccg ctcccggaaa cgcagcgcca gcttgccggc agtggtggtc ttgccggagc
     3421 cttgcaagcc gaccagcagg atcggcaccg gcggaacggc ggtgagattg atcgggacgg
     3481 cgccgacacc gcccagttgc tcgatcatca cgtcgttgac gattttgatg acctgctgac
     3541 ccggggagac ggactgcagg acctcgacgc cgatggcgcg gtcgcggacc ttggtgatga
     3601 agtcgcgcac cacgggcaaa gccacgtcgg cgtccagcag cgcgaggcgg acttcgcgta
     3661 gcgcctcggc cacgtccatt tcgttcagcg tgccacggct gcgcagacgg tcgaagacgc
     3721 cgttcagctt gtcggacaga gcctcgaaca cggcaaaacc tcctggccaa tcccctgggc
     3781 tgggcccaaa acgacgatac gccgctgcgc gaaccctcgc ggagcggcgg agcccccgcg
     3841 ttaggcgggg accgggtttt cgaagtgtcc cggatgggcg gggttatgtg gcggcgaggg
     3901 aggccgagtc aagcagcggc cggcatcggt aacgggtcga tgctcgcatc gtggccttcg
     3961 atgccgttcg acccgcggat ggcgcgggca ggcggagtgc gactacgacc cctgcgcaga
     4021 gatgttgacc ggttgaatga tcgactgcat tcgactcaaa gtcgccgttt aacgctgcgc
     4081 cagtgcttcc cgattgcaat cactggttca gcaagacaac atgttgcagt cgtagaggag
     4141 gctatggtgg gacgtgttag agtcgctgcg ttttcgctgt cgctggacgg gttcggcgcg
     4201 ggccaggaac aaagccttca ggatcctctg ggaaagcgcg ggacggagct ccacagctgg
     4261 ttcttcggaa cgaagacgtt caaggccatg ttcggccagg gcggtggctc ggagggcgtg
     4321 gacgagacct ttgcccaccg gtcgatggac ggcttcggtg ccttcatcct tggccggaac
     4381 atgttcggtc ctgtgcgcgg ggaatggctg gacgacagct ggaagggctg gtggggagac
     4441 aatccgccct atcacgctcc gacgttcgtc ctgacacacc acgcccgcga gccgatcgta
     4501 atggagggcg gcaccacgtt ccacttcgtc acggacggga tccacgccgc gctcgaacgt
     4561 gcacgcgatg ctgcgggagc acgtgatgtc aagatcggag gtggcgtctc gaccgttcgc
     4621 caatacctgc aagccggcct gatcgatgaa ctgcactttg cgttttcgcc tgtcctgctc
     4681 ggacggggcg aggcgatgtt cgagggcctg gatctccctg ccctgggcta ccgcgtgaag
     4741 gaatccactg cgacagacct cgcgacgcac gttgtgctcg ggcgccagga gaacgaataa
     4801 acgtccgctt ctgcaggttc gtcgccagaa accggcgggc ggcaaaccac ctaacgccgc
     4861 ccgtgttcgg gcgctgccga ccgcgcggcg cgccagccct accgagcgca attattcact
     4921 ggtccggcca atacccatca gtcagcgtct tcagaaacgc aatgatgtca tcctcttcct
     4981 gaggcgtcat cgccggctga tcccccaggc tgcgatcgaa cggcggatcc accacgtcaa
     5041 cattgcccag aaaccgtgcc ggaatatcgt tgaactgcgc cactttgccg tccggtgccc
     5101 gcgggtaaat ccgcccaggt tcagtatccc ggtaattgta gaagtcctgg acttcctgca
     5161 gcgagtggaa cacgccgttg tgaaagaaca cgctccgggt tgccacgtta cgcagcgtcg
     5221 gcgtcaggaa catgccgcaa aactgcgtct cgctccgcat ttccgtgcga tacggaccac
     5281 aaatgccgag gtcgaaatac ctggagtcag cgttcgccgc caacgccggg tttcggggcg
     5341 ccccaagggc ctcgtactgc ccgtcggtga ataacggcgg caggccatcg ggacgcggct
     5401 gatccaaatg gcaaccgcca caattcgcct tatccggatt gttgaacagc cgatacccgc
     5461 gcagttcttc ctgggtcagc cgcgtcttgc cctccagcca atagtcgaac ttgctggtgt
     5521 aagggtgaaa gctcgggtcc tcgatctgat agcgcgccac cgcaaacagt gcctcggcga
     5581 ccgccagccg gggtgtggcg aacaccgagg cgccgaacag gtccaccatc cgagccgcga
     5641 acgatgctcg ccgcagcttt gccgtgacga ggctgacggt cccgccatcc atctcgaatg
     5701 ggctcagc
//
LOCUS       DATAVD010000933         1656 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1018666, whole genome shotgun sequence.
ACCESSION   DATAVD010000933 DATAVD010000000
VERSION     DATAVD010000933.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1018666"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..571)
                     /locus_tag="VHX39_17950"
     CDS             complement(<1..571)
                     /locus_tag="VHX39_17950"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX3993059.1"
                     /translation="MADAASAQVVGQRDFGLAQGDAGSTLTRASQPAKIRYLEGLRGI
                     AAVQVVLLHFVTGFLPSTAEHAVPPLPVLWDGHTAVYVFFLISGAVLTPSFARGGWWP
                     RQVAKRLVRLGLPIAAAGVIALALLASMPDAHIAAARLTGSGWLAMDSNAATTLTHLL
                     REITLDSLVLGYREYTLFAPMAGHLPLLEY"
     gene            complement(576..1271)
                     /locus_tag="VHX39_17955"
     CDS             complement(576..1271)
                     /locus_tag="VHX39_17955"
                     /inference="COORDINATES: protein motif:HMM:NF042734.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HEX3993060.1"
                     /translation="MSAEQVTIRINETDTVSGLLLVPAQPVACYVLAHGAGAGMTHRF
                     MSAVAEGLQARRLATLRYQFPYMEHGSRRPDRPALAHAAVRAAVAAASSLTPALPLIA
                     GGKSFGARMTSQAHAEKPLPNVHGLAFLGFPLHPAGKPSDDRAAHLSEVRIPMLFLQG
                     TRDALAAPQILGTVLNRLSPLVTSHLIDQADHSFHVPMRSGRTDKQVLDDLLDTLVAW
                     TMTICGPRPRPDC"
BASE COUNT          351 a          501 c          526 g          278 t
ORIGIN      
        1 catattccaa caacggcaga tggccggcca tgggcgcgaa caaagtgtat tcgcggtagc
       61 caagtaccaa actgtcaagc gtgatctcgc gcaacaggtg agtgagtgtc gtcgcggcat
      121 ttgaatccat ggccaaccag cccgagcctg tcaggcgagc ggctgcgatg tgcgcgtcag
      181 gcatcgacgc cagcaaagcc aaagcaataa ccccggcagc ggcgatcggc aggccaagac
      241 ggaccaaccg cttggcgacc tgacgcggcc accatccacc gcgcgcaaac gacggtgtca
      301 gtacagcgcc actgatcagg aagaacacgt aaaccgcagt gtggccgtcc caaagtaccg
      361 gcagaggcgg cactgcgtgt tccgcggtgc tggggagaaa ccccgtaacg aaatgcagca
      421 gaacaacctg cactgcggcg atacctcgta gtccctccag atacctgatt ttggccggct
      481 gcgatgcacg ggtcagcgtc gatccggcat cgccctgggc caggccaaaa tcccgctggc
      541 ctaccacctg ggcggatgcg gcgtcggcca tccaatcagc agtccggacg tgggcgtggc
      601 ccgcaaatcg tcatggtcca tgcaacgagc gtatccaaaa gatcgtcgag cacctgtttg
      661 tcggtccttc ccgatcgcat cgggacatga aacgaatgat ccgcctggtc gatcagatgc
      721 gaggtcacca aaggcgacag ccggttcagc accgtgccaa gaatttgcgg ggcggcgagg
      781 gcatcccgcg tgccctgcaa aaacagcatc ggtattcgaa cctccgacaa atgcgcggcg
      841 cggtcgtccg agggcttacc ggccgggtgc aacggaaaac cgaggaaggc aagtccgtgc
      901 acgttcggca atggcttttc cgcgtgcgcc tgagacgtca tgcgggcacc gaacgatttc
      961 cctccggcga tgagcggaag tgccggggtg aggctactcg cagccgcgac cgccgcgcgc
     1021 accgccgcat gggccagggc cggccgatca ggacgcctgg atccatgctc catatagggg
     1081 aattgatacc gcaaggtagc cagacgccgc gcctgcaggc cctcggcgac cgcggacatg
     1141 aacctgtgcg tcatgccggc acctgcgcca tgggccagga cataacaggc aaccggttga
     1201 gccgggacca gcagaaggcc ggagacagtg tcggtctcgt tgatgcggat ggtgacctgc
     1261 tctgcgctca tcggacctcg ctgcgcatca tggtcgatgc ctgaaaggaa tgcgttgcct
     1321 atcgaatgaa cgcctggccc ggttcgaaac gcaagataag ccgggagagc acattgtatc
     1381 gcattacgac cgagttgaga ggtggagttt tccgcatcct ggtgctacgg caattacctg
     1441 gacgcaagga taatgtcatt tcgagtcggg gtagtgggcg gagctgctct cccgcttctc
     1501 tggccaggcg gataccagcg tcgcgagggg tcggaacgat gcgattgaag atctggctgt
     1561 cgatcggcgc cgctgttctg atcccgctcg ggcttcattc gccaggactg gcgcgaggcc
     1621 caatcgccga ttggaaattc tacggcggcg tgtcga
//
LOCUS       DATAVD010000934         1773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1018695, whole genome shotgun sequence.
ACCESSION   DATAVD010000934 DATAVD010000000
VERSION     DATAVD010000934.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1773
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1018695"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1301)
                     /locus_tag="VHX39_17960"
     CDS             complement(<1..1301)
                     /locus_tag="VHX39_17960"
                     /inference="COORDINATES: protein motif:HMM:NF020846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease pro-enzyme activation domain-containing
                     protein"
                     /protein_id="HEX3993061.1"
                     /translation="MKSFFLPFAGVCSLLAASAVLAAPSGFPKQAIVSNVNEAQLSVL
                     AGNTRPEANPANDQGVVAGSMPMQHMLLQLKRTPEREAALTQLIDDLHNPQSESFHQW
                     LTPQQFAAHYGVAGEDSATVTRWLQSQGLTVNGVTPSGMLIDFSGTAAQVSQAFRTEI
                     HHYLVDNVSHIANASDPKIPKALAPAVAGIVSLHDFRPKGQLVPRAKPGYTYSTTNGT
                     FHALVAGDIATIYNLKPLFDAGYTGKGQTIMVVEDTYLYTTSDWSVFRDTFGLKKYSA
                     GSLAQVSPTGGIPCTNPGFQGKKKDPGYGDDGEAAIDVEWATAAAPNAAIVLAACEDT
                     TTTFGGLIALVNTLGGSNGPLPSVVSISYGEAEAVNGESANLTYYFAYQQAAAEGVSV
                     FVSSGDEDGMSADDGNVAKHGIGVSGFTSTPYNVSVGGLDFG"
     gene            complement(1593..>1773)
                     /locus_tag="VHX39_17965"
     CDS             complement(1593..>1773)
                     /locus_tag="VHX39_17965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993062.1"
                     /translation="VYYVLSADYNQYMDIQQAISLAIHREFERRDIEFAYPTQRLLLE
                     RTSMRDAEPARRKAG"
BASE COUNT          345 a          552 c          503 g          373 t
ORIGIN      
        1 ccgaaatcca gaccgcccac cgatacattg tagggcgtcg aggtaaatcc gctgacgccg
       61 ataccgtgct tcgccacgtt gccgtcgtcg gcgctcatcc catcttcatc gccggaggag
      121 acgaataccg acacgccctc cgctgccgct tgttgataag caaagtaata agtcaggttg
      181 gcgctctccc cgttcaccgc ctcggcttcg ccgtagctga tgctgaccac cgagggcaac
      241 gggccgttcg atccgcccag cgtgttaacc aatgcgatga gcccgccgaa tgtcgtcgtt
      301 gtgtcctcgc acgccgccag cacgatggcg gcattcggcg ccgccgccgt ggcccattcg
      361 acgtcgatgg cggcctcacc gtcatcaccg taccccggat cttttttctt gccctggaac
      421 cccgggttcg tgcagggaat gccgcccgtc ggactcacct gagcgagcga ccctgccgaa
      481 tacttcttca aaccgaacgt gtcgcgaaag acggaccaat cgctggtggt gtagagatac
      541 gtatcttcca ccaccatgat ggtttggccc ttgccggtat atcccgcatc gaacaacggc
      601 ttcaagttgt aaatcgtggc aatatcgccg gccaccagcg cgtggaaggt accgttcgtg
      661 gtgctgtagg tatagcccgg cttggcccgc ggcacgagct gccccttcgg gcgaaaatcg
      721 tgcagcgaca cgatgcccgc caccgccggc gcgagcgcct tcggaatttt cggatcgctg
      781 gcattcgcta tgtgcgacac gttgtccacg agatagtgat gaatctccgt gcgaaacgcc
      841 tgcgacacct gagccgccgt gccgctgaag tcgatgagca taccgctcgg cgtcacgccg
      901 ttcaccgtca agccctgcga ttgcagccaa cgcgtcaccg tcgccgagtc ttcgccggca
      961 acgccgtagt gcgccgcgaa ctgctgcggg gtgagccact ggtgaaaact ctccgactgc
     1021 ggattgtgca agtcgtcgat cagttgagtc agcgccgctt cgcgttcggg tgtgcgcttc
     1081 aattgcagca gcatgtgctg catcggcatc gaacctgcaa ctacgccctg atcattggcg
     1141 gggttcgcct cgggtcgcgt gttgccggcg agcaccgata gctgtgcctc attgacgtta
     1201 ctcacgatcg cttgtttcgg aaatccgctt ggcgcggcca agacggcgga tgcagccagc
     1261 aatgagcaca cgccggcaaa tggcaaaaag aatgacttca taattcaccc ctatgttttt
     1321 gtgaccggca ctcaagcgca gtcttcagcc aatcctatag cgactccacg cctgagtcac
     1381 gcggcccaga gccatccgat aagtcgtctc ggccgtgccg tcgatttgtc ataaatcacg
     1441 gtgaatttgc gagcgcttgc attgaagctg cagttcgccg cctgaccgag cggcggcgct
     1501 tcgcaagacc gtgcaagcta ctgaataact tgagttttac atgagcgaat agcggcggaa
     1561 cagtccgatc tggtcagtcc ggcgaacttg aatcagcctg ccttgcgtcg ggccggttct
     1621 gcgtcccgca tggaggtgcg ttcgagcagc agacgctgcg taggataggc aaattcgatg
     1681 tcgcgccgct caaattctcg atgtatcgcc agactgatcg cctgctgtat gtccatgtat
     1741 tgattataat ctgccgaaag cacgtagtag acg
//
LOCUS       DATAVD010000935         1880 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1950690, whole genome shotgun sequence.
ACCESSION   DATAVD010000935 DATAVD010000000
VERSION     DATAVD010000935.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1880
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1950690"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..621
                     /locus_tag="VHX39_17970"
     CDS             <1..621
                     /locus_tag="VHX39_17970"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3993063.1"
                     /translation="FAMLLLMPIAGQVSGRFQPKYLITIGLLGIALSMWYSTSLTPDA
                     SFGYFAWVRVYQTLGLPFLFIPINTVAYDGLPRDKTNQASALMNVARNLGGSIGISLA
                     NVEITQRTQLHQSRLVENTIPSSPVFQSTLHGLSQYFVQHGAAPGAANSEAIGFMGHL
                     VQTQATILAYIDVFHLCSVVAALMIPIVLIMVRRVQLGHGAPAAGH"
     gene            738..1142
                     /locus_tag="VHX39_17975"
     CDS             738..1142
                     /locus_tag="VHX39_17975"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HEX3993064.1"
                     /translation="MLRNVASAGLAAFAVAMALAAGIAATPSQQPAITLDLFMVDYKF
                     IPNHLTFQHDVHYRLHMENHGKETHEVTAPMFFATAEIGNPEVLNREHTEIVVQPGES
                     KDLYLTAHRPGTYDLRCSDHDWNGMVGGITVE"
     gene            1547..>1880
                     /locus_tag="VHX39_17980"
     CDS             1547..>1880
                     /locus_tag="VHX39_17980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993065.1"
                     /translation="MTRDFGTGTRGFAASDDHGLAVCVLPGTELAFADDVACLPAGLL
                     GWKTKTISYRTAIFRQVNKDKMAAHHDAIEFPDGRVVLLTLLCEGQAATVLQLPANPA
                     TAEQAREQE"
BASE COUNT          340 a          615 c          562 g          363 t
ORIGIN      
        1 tttgccatgc tgctgctgat gccgatcgcc ggccaggtct ccgggcggtt tcagcccaag
       61 tatctgatca ccatcggcct gctcgggatt gcgctttcga tgtggtactc gacctcgctc
      121 acgcccgacg ccagtttcgg ctatttcgcc tgggtgcggg tctatcagac cctcgggctg
      181 ccgttcctgt tcatcccgat caacaccgtg gcctatgacg gcttgccccg ggacaagacc
      241 aatcaggcct cggcgctgat gaacgtcgcc cgcaatctcg gcggcagcat cggcatctcg
      301 ctcgccaatg tggagatcac ccaacgcacc cagttgcacc agtcgcggct ggtcgagaac
      361 acgattccat cctcgccggt gtttcagtcg acgttacacg gcctgagcca atattttgtc
      421 cagcacggtg ccgctcccgg cgcggcgaat tccgaggcga tcggatttat gggccacctg
      481 gtgcagaccc aggccacgat cctcgcctat atcgacgttt tccatctctg ctcggtggtc
      541 gccgcgctga tgatcccgat cgtcctgatc atggtgcgcc gcgttcaact ggggcacggc
      601 gcgccggccg ccggacatta atgccgcctg ccgagcccga tggacttttt tagcggattg
      661 catggtaatt aagcagtcca caacctgggc ggaggcggcg ctgctgtcga gatgggccga
      721 gcgccgggag agcattgatg cttcgcaacg ttgccagcgc gggcttggcg gcctttgccg
      781 tcgccatggc attggcggcc ggcatcgcag caacgccttc acaacaaccg gccatcaccc
      841 tcgacctgtt catggttgat tataagttca tccccaacca cctcaccttt cagcatgacg
      901 tgcattaccg cctgcacatg gaaaaccacg gcaaggaaac ccatgaggtc accgcgccga
      961 tgtttttcgc caccgccgaa atcggcaatc ccgaggtgct caatcgcgag cataccgaga
     1021 tcgtggtcca gcccggggag agcaaggatc tctacctgac ggcgcatcgt cccggcacct
     1081 acgacctgcg gtgttccgac catgactgga acggcatggt cggcgggatc accgtcgaat
     1141 aactctatgc cgtcacgcac cgctgaagcg tgatcgtggc gcatgatttt tcccgaaaac
     1201 cgctatccac ttttcgggat cacgctccag ccacggtggt aggcagcgat cggcgcggat
     1261 tgcccgatcg cgtagcactc gccacttcgc gcttggcgcg gtcgggccgc gcgccggcct
     1321 taagcccgcc caacttggcg ccgacgctcc cgatcgccgc gacgcaaggc cgtcagtcaa
     1381 tccgagttgc tgcggcattt cggtgcggca ccaaacttgc ttgatgagag ttgtcggagg
     1441 ggcgctgcag ggggctcatc gagagacctg gagaaaggag tcgccaatgt gtgactttag
     1501 cctgcaaagc gttcggtccc ggccagcgca ggtcggcgac aagattgtga cgcgtgactt
     1561 cggcaccggg acgcgcggct ttgccgcctc ggacgaccac ggcctggcag tatgtgttct
     1621 gccgggaact gaactggcct tcgccgatga tgttgcctgc ctgccggcag ggctgctcgg
     1681 ctggaagacc aagaccatca gctaccgcac cgccatcttc cggcaggtca acaaggacaa
     1741 gatggccgcg caccacgacg cgatcgagtt tcccgacggc cgcgtcgtgc tgctcacgct
     1801 gctgtgcgag gggcaggcgg caaccgtgct gcaattgccg gcgaatccgg ccactgcaga
     1861 acaagcccgc gaacaggaac
//
LOCUS       DATAVD010000936         2873 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1019011, whole genome shotgun sequence.
ACCESSION   DATAVD010000936 DATAVD010000000
VERSION     DATAVD010000936.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2873
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1019011"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1383)
                     /locus_tag="VHX39_17985"
     CDS             complement(<1..1383)
                     /locus_tag="VHX39_17985"
                     /inference="COORDINATES: protein motif:HMM:NF018938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HEX3993066.1"
                     /translation="MSASGRILAEIRRNRRPLRLMGASGQLGYGIPTPGFTAGLAKKP
                     DLIGCDMGSIDIGPTYLGKGEMATAPEATRRDLRKVLLAARELDVPMVIGSAGSAGAA
                     PHLDATLALIRDIARTDGLRFRMAVIRADIDRPTLLEASHGGKVISFDDMPPLTDDDI
                     TGAAHIVGQMGTGVFRRALEADVDVVIAGRACDTGIFAALPMLLGFPAGLAMHMAKII
                     ECASLCCVPGGRDPIIAELDDDGFVLESTNPERRATPTSVAAHSLYEQADPFTVHEPE
                     GTLDLSNARYEAVDDRRTRVSGAMWRDTDSPTIKLEGARLIGERAVLLAGAADPRFIA
                     QSKDILPKLSDLVRDLVCEDQPQDYTLRWRVYGVDGVRMVVPANEPTPGEVFIMGECI
                     APTRERASEVVRTCKQYLLHFGYPGRLSTAGNLAFPFTPPEVSLGPAYRFNVYHLLKV
                     DDPDALFPMNI"
     gene            complement(1380..1682)
                     /locus_tag="VHX39_17990"
     CDS             complement(1380..1682)
                     /locus_tag="VHX39_17990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4387 domain-containing protein"
                     /protein_id="HEX3993067.1"
                     /translation="MKLSDIAQVIRSKNAGPRRLTLDVMFGSDADYQRVAQSPALGAE
                     AVGLLYGVPTEAVTVIPYPAGRAIKIVLARRVMAGDPGDVDVYGAQQHAPLLGIEL"
     gene            1897..2781
                     /locus_tag="VHX39_17995"
     CDS             1897..2781
                     /locus_tag="VHX39_17995"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF001319.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0019632 - shikimate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEX3993068.1"
                     /translation="MFNRQALVGLIGANIMKSLAPALHIDAFAAAGITGHYHLMDVDQ
                     LPGRTLAGLLEAVKTAGFLGVNVTFPFKQTVMPMLDELSAEARQTGAVNTVVISPSGH
                     TTGHNTDRSGFRLNFEDGLGRASAEGKTAVLVGAGGAGSAVAFALMDIGLRELIVFDK
                     DLARAAALVGDVTTHFGLGRCRVSERLSDEIAAADGVANATPIGMTGFPGNPVPVDAL
                     CPQHWVADVIYTPIETELIRVAAAKRARVLTGGGMCVHQAVDAFRLFTGLTPDAARMH
                     RTFDDALRTRDKALGGVS"
BASE COUNT          487 a          873 c          982 g          531 t
ORIGIN      
        1 gatattcatc gggaacaatg cgtcggggtc atcgaccttc agcaggtggt aaacgttgaa
       61 acggtacgcc ggaccaagcg aaacctccgg cggggtgaac ggaaacgcca ggttgcctgc
      121 ggtcgacagc cggccggggt agccgaagtg cagcaaatat tgcttgcagg tccggacgac
      181 ttccgacgcc cgctcccgcg ttggcgcgat gcattcgccc atgatgaaca cctcgccggg
      241 cgtcggttcg ttcgccggca ccaccatgcg tacgccgtcc accccgtaaa cccgccagcg
      301 cagggtgtag tcctgcggct gatcctcaca caccagatcg cgtacgaggt cggacagttt
      361 gggcaggatg tccttgctct gggctatgaa tcttggatcg gcggcaccgg cgagcagcac
      421 cgcgcgctcg ccgatcagcc tggcaccctc cagcttgatc gtggggctgt cagtgtcgcg
      481 ccacatcgca ccggaaaccc gcgtccgccg gtcatcgacc gcttcgtatc gcgcgttgga
      541 cagatcgagc gtcccctccg gttcgtgcac ggtgaatggg tccgcctgct catagaggct
      601 gtgcgcggcg accgaggtcg gggtggcgcg tcgctccggg ttggtgcttt ccaacacgaa
      661 accgtcatcg tcgagctcgg cgatgatcgg atcgcggccg ccgggcacgc agcacagcga
      721 cgcgcactcg atgatcttcg ccatgtgcat ggcgaggccg gcgggaaatc ccaacagcat
      781 cgggagggca gcgaagatgc cggtgtcgca ggctcggccg gcgatgacga cgtcgacgtc
      841 tgcctccaac gcgcggcgaa acacgccggt gcccatctga ccgacgatgt gcgcggcgcc
      901 ggtgatgtcg tcgtcggtca gcggcggcat gtcgtcgaag ctgatgactt ttcccccatg
      961 cgacgcctcc agcagggtcg gccggtctat gtcggcgcgg atcaccgcca tgcggaagcg
     1021 taatccgtcg gtccgcgcga tgtcgcggat cagcgccagt gtggcatcaa ggtgaggtgc
     1081 ggcacccgcc gaaccggccg aaccgatgac catcggcaca tccagttctc gggcggcgag
     1141 cagcactttg cgcaggtcgc ggcgggtggc ctccggtgcg gtcgccatct cgcctttgcc
     1201 caggtaggtc gggccgatat cgatggagcc catgtcacag ccgatcaggt cgggcttttt
     1261 cgcgaggccc gcggtgaagc cgggcgtcgg gatgccatag ccgagttggc cggaggcacc
     1321 catcagccgc agcggccggc gattgcggcg gatttccgcg aggatgcggc ctgaggcgct
     1381 cacagttcga tccccagcaa aggcgcatgc tgttgcgcgc cgtaaacgtc tacgtcaccg
     1441 ggatcaccgg ccatgacgcg gcgcgccagc acgatcttga tcgcacggcc ggccgggtaa
     1501 gggatgacgg tcaccgcctc ggtcggcacg ccatagagaa ggccaaccgc ttccgcgccg
     1561 agtgccgggg attgcgcgac ccgttgatag tcggcgtcgc tgccgaacat gacatccagc
     1621 gtcagccgcc tcggtcccgc attcttgctt cgtatcacct gggcgatgtc ggacaatttc
     1681 atggtgtttc ctcgggcgtg tgcgtcagct tcacgccggg cgacgcaaac gtgcaagccc
     1741 attggctttt tccggaccgt ggcggcagtc ttcccggcca ttgccatcga caaggaggcc
     1801 tacgaccgga tgaacgagcc ggtgcggacg tccgcgtggc ggttgacgtt ggctgagact
     1861 gtgccacacc ctgaataggc aacgggagca accgcgatgt tcaatcggca ggctctggtc
     1921 ggactgattg gcgccaatat catgaagtcg ctggctccgg cgctgcacat cgacgctttt
     1981 gcggccgccg ggatcaccgg gcattaccat ctgatggatg tcgatcagtt gcccggccgg
     2041 acgctggcgg gattgctcga ggccgtgaaa acggcgggat tcctgggcgt gaatgttacc
     2101 tttccgttca agcagactgt tatgccgatg ctggacgaac tgtcggccga ggcgcggcag
     2161 accggcgcgg tcaacaccgt ggttatttcg ccgtctggcc atacgacggg ccataacacc
     2221 gaccgcagcg gcttccggtt gaactttgag gacgggctgg gtcgcgccag tgcagagggc
     2281 aagaccgcgg tgctggttgg tgcaggaggt gccggcagcg cggtagcatt tgccctgatg
     2341 gatatcgggc tgcgtgagtt gatcgtgttc gacaaggatc tggcgcgagc ggcggcgctg
     2401 gtgggcgatg tgacgaccca ttttggcttg ggacggtgcc gtgtttcgga acggttgagt
     2461 gatgagatcg cggcggcgga cggcgttgcc aacgccacgc cgatcgggat gaccggcttc
     2521 cccggcaacc cggttccggt tgatgcgtta tgtccgcagc attgggtcgc cgacgtgatt
     2581 tacacaccga tcgaaacgga actgatccgg gttgcggcgg ccaagcgcgc tcgtgtgctg
     2641 accggaggcg gcatgtgcgt gcatcaggcg gtggatgcgt ttcggttgtt caccggcctt
     2701 accccggatg cggcgcgcat gcatcgcacg ttcgacgacg cgttgcggac gcgtgacaag
     2761 gcactgggtg gagtatcgtg aaaaccgcta tcgcaacggt ttgcctcagc ggcgggttgg
     2821 acgaaaagct ggtggcgatt gccaatgccg gcttcaaagg tgtcgagata ttt
//
LOCUS       DATAVD010000937         2969 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3627297, whole genome shotgun sequence.
ACCESSION   DATAVD010000937 DATAVD010000000
VERSION     DATAVD010000937.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2969
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3627297"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..114)
                     /locus_tag="VHX39_18000"
     CDS             complement(<1..114)
                     /locus_tag="VHX39_18000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007091240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEX3993069.1"
                     /translation="MSRRPIIGVTLDSEQPGGYSKYPWYALRRNYLDAVAAA"
     gene            complement(319..1509)
                     /locus_tag="VHX39_18005"
     CDS             complement(319..1509)
                     /locus_tag="VHX39_18005"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HEX3993070.1"
                     /translation="MRNPNTLLSGTWTAIVAAIANVVDLEATAREFRALQRVRKIRTA
                     EALLRLALMWGPGRQSFREAAALAGDAGIADLSDKAVEGRLRKMGDWLAHILVMLLAN
                     RLGQPGWASSGDLAISLVDGSVICAPGQGQDWRLHARYDPGRGRFADLALTTTREAEA
                     VGRTRICPGHILIMDRGYARVRNFKAVLEGGGNFITRISWGSVKLHDAAGARVDLTAL
                     LAGTTQMREVPVWIAGIPGASRLVIQPLPPEDAERQRARRLRKANRNSRQINPRTVQA
                     AGFLMLLTSLAPDAQPTEQVIALYRDRWQVEIGFKRLKTLGRLDELPSTDPVLARTWL
                     LAHLIAAVLTDDLANEIVGFPPSPRRANARTAIALARLGESEGNLALGHFTETQTAIA
                     RSFG"
     gene            1718..2596
                     /gene="dapA"
                     /locus_tag="VHX39_18010"
     CDS             1718..2596
                     /gene="dapA"
                     /locus_tag="VHX39_18010"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEX3993071.1"
                     /translation="MFKGSLVALITPMRDDGSVDEKAYAEFVDWQIKEGTKGVIPVGT
                     TGESPTLSHDEHRRVVEIAIEVAKGRVPVIAGAGSNSTEEAIELARHAKEAGADAALI
                     VTPYYNKPTQEGMYLHFKAIADSVDLPIIIYNIPPRSVVDMSVETMARLAKHKNIIGV
                     KDATANLTRPLHTRRACGDDFCQLSGEDHTALSFNAAGGVGCISVTANVAPRLCNEMQ
                     TAWADGRLKDAMAIQNRLVPLHDALFAETSPGPVKFAASLLGKTTERCRLPLAPLMGP
                     TRERVRVAMTEVGLLN"
     gene            2610..>2969
                     /gene="smpB"
                     /locus_tag="VHX39_18015"
     CDS             2610..>2969
                     /gene="smpB"
                     /locus_tag="VHX39_18015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEX3993072.1"
                     /translation="MAEARKKGLISHGIAAQNRKARFDYTIKEMVEAGLVLKGAEVKS
                     LRHGRATLTDAWAGERDGEMWIFNLYIPEYQGGVLSKFEPKAPRKLLLKHKQIAALLG
                     QVARKGVSLVPLDIHFNE"
BASE COUNT          583 a          953 c          918 g          515 t
ORIGIN      
        1 cgccgccgcg accgcatcca ggtagttccg gcgcaaggca taccaggggt atttcgagta
       61 accgccgggc tgctcggaat ccaacgtcac gccaatgatg ggccgcctgc tcatgcccgt
      121 tgctagaccc cacgggccgg acggggcaag agtgccggca tggtcatgca gggatgtcga
      181 tgggggatgg gaagaggtaa gggctccgcc ctgagacccg ccaggggctt tgccccatac
      241 gcgcgaactt atggcggcct gagttggcac gcctggagca cgcggcgtct tggggcctcg
      301 gcgagccgcc gtcgaaactt aaccaaagct gcgcgcgatt gcagtttggg tctcggtaaa
      361 atggccgaga gcaagatttc cctcgctttc gcccaggcgc gccagagcga ttgcggtgcg
      421 ggcgttggct cgcctcggcg aggggggaaa accgacaatc tcgttggcga gatcgtcggt
      481 cagtactgcg gcgatcaaat gcgccaacaa ccacgttcgt gccagaaccg gatcggtcga
      541 cggcagttcg tccaatcggc ccagcgtctt cagtcgtttg aagccgatct ccacctgcca
      601 gcgatcacga taaagtgcga tcacctgctc ggtgggctga gcatccgggg ccagcgaggt
      661 gagcagcatc aggaacccgg ccgcctggac cgtgcgcggg ttgatctgcc gactgttccg
      721 gttcgccttg cgcagccgac gggcgcgttg gcgttcggcg tcctcgggcg gcaaaggttg
      781 gatcacgagg cgcgacgcac ccggaatacc ggcgatccag acaggaactt ctcgcatttg
      841 agtggtaccg gcaagcaacg ccgtaagatc gacacgcgcg ccggcggcgt catgaagttt
      901 caccgaaccc caactgatcc gggtgatgaa attcccgcca ccctccagca ccgctttgaa
      961 gttccgcacc cgcgcataac cgcgatccat gatgaggatg tgacccggac aaatgcgcgt
     1021 ccggccaacc gcctccgcct cacgggtcgt ggtcagcgcc agatccgcga accggccacg
     1081 acctgggtca tagcgggcat gcagccgcca gtcctggccc tgtcccggtg cgcaaataac
     1141 cgagccatcc accaacgata ttgccagatc gccgctgctg gcccaccccg gctggccgag
     1201 gcggtttgcc agcagcatga cgaggatatg cgccagccaa tcgcccattt tgcgcaatcg
     1261 accttccacg gccttgtcgc tcagatcggc aataccggca tctccggcca gggccgccgc
     1321 ctcacgaaac gattgccgac cgggacccca catcagggcc agacgcaaca aggcctcggc
     1381 ggtccggatc tttcgaacac gctgcagtgc cctgaactcg cgtgctgtgg cttcgaggtc
     1441 cactacattg gcgatggctg caacgatcgc tgtccaggtg ccagacagaa gtgtgttcgg
     1501 attgcgcatt cgcacccaga atcgtaccgc tccgtgaccg cgcaagcctt agattcgcgc
     1561 gtatggggca aggcccctgg cgggtctgag ggtggagccc tcgcgcttcg cccgccccag
     1621 tccctcatgc tcgaccttgc agcgcgtcgc cgaccggctt acatcctgcc ccttcatcgg
     1681 ccgtgccaac agtcaaacgt ccacccagga gagggccatg ttcaaaggat cgctcgtcgc
     1741 gttgatcacc cccatgcgag atgatgggtc ggtcgacgag aaagcctacg ccgagttcgt
     1801 ggactggcaa atcaaagagg gcaccaaagg cgtcatcccg gttggcacca ccggcgagag
     1861 cccgacgctc tcgcatgacg agcaccgtcg cgtcgtcgag atcgccatcg aggtggccaa
     1921 gggccgggtt ccggtgattg ccggcgccgg ctcgaacagc accgaggaag cgatcgaact
     1981 cgcccgccat gccaaggaag ccggtgcgga tgcggcgttg atcgtgacgc cgtactacaa
     2041 caagccgacc caggaaggca tgtatctaca ctttaaggcg atcgccgact cggtcgatct
     2101 gccaatcatc atctacaaca ttccgccgcg cagcgtggtc gacatgagcg tcgagaccat
     2161 ggcgcgactc gcgaagcaca agaacatcat cggcgtgaag gacgcgaccg ccaatctgac
     2221 gcgtccgttg cacacgcgcc gtgcctgcgg cgacgatttc tgccaattgt ccggcgaaga
     2281 tcataccgcc ttgtcattca acgctgctgg tggcgtcggc tgcatcagcg tcaccgcgaa
     2341 cgttgcgcca cgcctctgca acgaaatgca gaccgcctgg gcggacggcc gcctcaaaga
     2401 cgcgatggcg atccagaacc ggctggtgcc gctgcacgat gctttgttcg ccgaaacgag
     2461 tccgggcccg gtgaaattcg ctgcttcgct tctcggcaag accaccgagc gttgccgcct
     2521 gccgttggca ccgttgatgg gcccgacccg ggaacgcgtc cgcgtcgcga tgaccgaggt
     2581 cgggttgctg aactgaagac caacctgccg tggccgaggc tcggaagaaa ggcctgattt
     2641 cgcacggcat tgccgcgcaa aatcggaaag ctcgtttcga ctataccatc aaggagatgg
     2701 tcgaggcggg ccttgtgctg aagggcgcgg aagtgaaatc cctgcgccac ggccgtgcca
     2761 cgctgaccga cgcatgggcc ggcgagcgtg atggcgaaat gtggattttc aatctttaca
     2821 tccccgaata tcaggggggc gtactctcga agttcgaacc caaggcgccg cgcaaactgt
     2881 tgctgaagca taagcaaatt gccgcgctgc tcggtcaggt tgcgcgtaaa ggtgtgtcgc
     2941 tggttccgct cgacatccat ttcaatgaa
//
LOCUS       DATAVD010000938         1611 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3627341, whole genome shotgun sequence.
ACCESSION   DATAVD010000938 DATAVD010000000
VERSION     DATAVD010000938.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3627341"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..730)
                     /locus_tag="VHX39_18020"
     CDS             complement(<1..730)
                     /locus_tag="VHX39_18020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993073.1"
                     /translation="MAASSDDTRSASSSDRRKPARDMRSASGSDRPKPARTAHYLVAP
                     AAPGVTGQALTDRLSKFGEIEVLQTHAERDSIAPPVAIVRMSDATAAALRRSAAGTLI
                     VEPDGYLRAASLAALAPLLPATAIITALAPGFKATIRILSEAGTPVEQAEVWLLGEQV
                     SVQGLTGSDGKVELTLHGELPETVAEIFVKPRSGYWGIWQQRPDLEANAVSTFTLKSL
                     TLPDVMDWGGAAMRFDRLPSQCRGG"
     gene            complement(749..1120)
                     /locus_tag="VHX39_18025"
     CDS             complement(749..1120)
                     /locus_tag="VHX39_18025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993074.1"
                     /translation="MPLLLRFQSQGAEQPFQTAPGNVVIPNPAFDRQAAENLIGDMIA
                     EPLRALSSYLEVNATQYAGLESCVPIVTQAAHRFAARDYAEAFNLIWLAYRMIETIRA
                     ADPKVPLLRQASAEPSQSSIH"
     gene            complement(1299..>1611)
                     /locus_tag="VHX39_18030"
     CDS             complement(1299..>1611)
                     /locus_tag="VHX39_18030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993075.1"
                     /translation="VVRQILPIVPQIVGMLQNQPQAQYGGLPGGLGFGQFGLGQSGLG
                     HSAQNFGAQAAFGGPSGFGFGQQQRQLTQQDVADITRQLIGVIPQVIGNLQAFNQQRM
                     N"
BASE COUNT          290 a          493 c          526 g          302 t
ORIGIN      
        1 cgccgccgcg acattggctc ggaagccgat cgaaccgcat cgccgcgccg ccccaatcca
       61 tcacgtcggg tagcgtcaac gatttcaggg tgaacgtact taccgcattg gcctcgaggt
      121 ccggacgttg ctgccagatc ccccaatagc ccgagcgcgg cttgacgaat atttcggcga
      181 cggtttccgg cagttcgcca tggagagtca gctcgacctt gccgtcgctg cccgtcaggc
      241 cctgaaccga gacctgttcg cccagcagcc acacctcggc ctgctccacc ggggtgccgg
      301 cttcgctcaa gatccggatc gtcgccttaa agcctggcgc gagcgcggtt atgatggcgg
      361 tcgcgggtaa taacggcgcc aacgccgcaa gcgacgcagc tcgaaggtaa ccgtctggtt
      421 cgacgatcaa tgtgccggcc gcggagcgcc tcagggcggc ggcggttgca tccgacatgc
      481 gcacgattgc gaccggcggg gcgatgctgt cgcgctcggc gtgggtttgc aggacctcga
      541 tttcaccgaa cttgctgagc cgatcggtca gcgcctgacc ggtcacgccc ggcgccgcag
      601 gtgcaaccaa atagtgcgcg gttcgcgccg gcttgggtct gtcgctaccg gaagcggagc
      661 gcatatcacg cgccggcttg cgtcgatcgc tgctcgaggc agagcgtgtg tcatcagaac
      721 ttgctgccat ggcgtcgcct cccaatctct agtgaattga cgattgagac ggctcggccg
      781 aagcctgccg cagcaacggg accttggggt cggccgcgcg gatcgtttcg atcatgcgat
      841 aggcgagcca aatcaggttg aaggcttcgg catagtcgcg ggcggcgaac ctgtgcgcgg
      901 cttgggtgac gatggggaca caactttcca ggccggcata ctgcgtggca ttgacttcaa
      961 gatagctgga gagcgcgcgc agcggttcgg caatcatgtc gccgatcagg ttttccgccg
     1021 cctgacgatc gaacgccgga ttcggaatca cgacgttacc cggcgcggtc tggaacggct
     1081 gttccgcgcc ctgcgattgg aagcgcaaca gaagcggcat caggttgccg agcaatccga
     1141 ccagttgttg aatgtccgac ggccgcggcg gtgatgtgga tgcgtgagaa ggattggagt
     1201 ctgacatgga tgttctcctt cgaaggacaa tgacggccgc gcgaccgccg ctttcggcgg
     1261 cggccgctga ctgccgttcg gatggccgcg atttgcggtc agttcatccg ctgttggttg
     1321 aaggcctgaa ggttaccgat gacctgggga atcacgccga tcagctgtcg ggtgatgtcg
     1381 gcgacatcct gttgcgtcaa ttgccgctgt tgctggccaa agccgaagcc cgaaggacca
     1441 ccgaacgctg cctgggcgcc gaaattctgc gcggaatggc caagtccgga ttgaccaagc
     1501 ccgaattgac cgaaaccgag gccgcccggt aaaccaccgt attgcgcctg tggctggttc
     1561 tgcagcattc cgacaatctg gggcacgatg ggcaggatct gccgcaccac t
//
LOCUS       DATAVD010000939         2219 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_648492, whole genome shotgun sequence.
ACCESSION   DATAVD010000939 DATAVD010000000
VERSION     DATAVD010000939.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2219
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_648492"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            192..965
                     /locus_tag="VHX39_18035"
     CDS             192..965
                     /locus_tag="VHX39_18035"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3993076.1"
                     /translation="MSSTITVAGVTLEVEQTGQGRPLLFLHPGEGLQPGRPWLQALAR
                     NHRVIAPHHPGFGNSSLPDWFGTVDDIAYLYLDLARQLELQDAVLVGACFGGWIAAEM
                     AVRDTSRFAGLMVSAPLGIKVGGVLDRDIADMHSIPRADFLRLAWADPENGAVDFAAL
                     PDTELAAIARGRESLALFGWKPYMHNPRLKRWLHRIDTPTQLIWGDSDGIVSTAYGEA
                     WRAEIPGAAMSVIPQAGHYPHWEQPEAFAAEVTTFTNKL"
     gene            980..2170
                     /locus_tag="VHX39_18040"
     CDS             980..2170
                     /locus_tag="VHX39_18040"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3993077.1"
                     /translation="MRTWYFSEMAYHPAWEKGLARGSLRVNFPSENLDPETAGKLLNR
                     YLDEFALCDEAGIDIMVNEHHSTATCMTVSVPMALAIIARETKRSRLLTLGNPIANRP
                     DPVRVAEEMAWLDCLSGGRLEMGLVKGAPYEIAPANSNPARLMRRYWEAHDLILKALS
                     TSTGPFNWEGEYYHYRNVNIWPRPIQQPTPPVWMTGMSVDTGTMAAERGHVVGTLLSG
                     GTARPMYDAYRKRARELGWEAGPDRFAYAAIIGVGHSTDEGLRRADIIADYVRTAPVV
                     AEPFTNPPGYNSIAANTVILKGGPRANRFVTDRHGEPINHRTASVQQFMDTETVFAGT
                     PDEVFDQIKTFNARMGGVGHLLFFGQGGLLTHQDAMENIRLFGKEVAPRLLELHAPER
                     AAAE"
BASE COUNT          432 a          734 c          656 g          397 t
ORIGIN      
        1 gcagcctatg ccagatatgt tgcgtcgcac aatatcttat tgcgtcaatt gtcagcaaca
       61 tttgtcaatt atgtctgtct ggtgtgcgat tgcatgtctt tgcggcctaa aattcgctca
      121 gaacgacccc atttgcagcc gggaatcatc gccgtaaact cacgggaaac agaccggcga
      181 aggaaacgcc catgagcagc accatcaccg tcgcgggcgt gacactcgag gtcgagcaaa
      241 ccggccaggg acgcccgctt ttgttcctgc atcccggcga gggattgcag cctggccgcc
      301 cctggctcca ggcgctggct cgcaaccatc gcgtgatcgc cccgcaccat ccgggcttcg
      361 gcaattccag cctgcccgac tggttcggca ccgtcgacga catcgcatac ttgtatctcg
      421 atctcgcgcg gcagttggag ttgcaggatg cggtgttggt cggcgcctgc ttcggcggtt
      481 ggatcgctgc cgaaatggcg gtgcgcgata ccagccgctt cgccggtctg atggtgtcgg
      541 cgccgctcgg gatcaaggtt ggcggcgtgt tggaccgaga cattgccgac atgcacagca
      601 tcccccgcgc cgatttcctc cgcctcgcct gggctgatcc cgagaacggc gcagtggact
      661 tcgccgcact gcccgacacc gaactcgccg ccattgcgcg cggccgcgag tcgctggcgc
      721 tgttcggttg gaaaccctac atgcacaatc cgcgcctgaa acgatggctg caccgcatcg
      781 atacgccaac ccaattgatc tggggcgact ccgatggcat cgtttcgact gcgtacggtg
      841 aagcctggcg ggcggaaatc cccggcgccg ccatgagtgt cattccgcag gcgggacact
      901 acccgcactg ggaacagccg gaagcgttcg ccgccgaagt aacgactttc accaacaaac
      961 tctgacccgg agccgatcca tgcgcacctg gtacttctcc gagatggcct accaccctgc
     1021 ctgggaaaaa ggcctcgccc gcggttcgct acgcgtcaat ttcccgtccg aaaacctcga
     1081 tcccgagact gccggcaaac tgttgaatcg ttacctggac gaattcgcgc tgtgcgacga
     1141 agccggcatc gacatcatgg tcaacgagca tcacagcacc gcgacctgca tgaccgtttc
     1201 ggtgccgatg gcgctggcca tcattgcccg cgagaccaaa aggtcgcgcc tgctgacgct
     1261 gggcaatccg atcgccaacc ggcccgatcc ggtgcgtgtc gccgaggaaa tggcctggct
     1321 cgactgcctg tccggcggaa ggctggagat gggtctggtc aaaggcgcac cttatgaaat
     1381 cgccccggcc aactccaacc cggcccgcct gatgcggcgc tactgggagg cgcacgacct
     1441 gatcctgaag gcgctgtcga cctccaccgg cccattcaat tgggaaggcg aatattatca
     1501 ctatcgaaac gtcaacatct ggccgcggcc gattcagcaa ccgaccccgc cggtgtggat
     1561 gaccggcatg agcgtcgaca ccggcaccat ggccgccgaa cgcggtcatg tcgtcggcac
     1621 cctgctatcc ggcggcaccg ccaggcccat gtatgacgcc tatcgcaaac gcgcccgcga
     1681 actgggctgg gaggccgggc cggatcgttt cgcttatgcc gccatcatcg gcgtcggcca
     1741 tagcaccgac gaaggcctgc gccgtgccga tatcattgcg gattacgtac gcaccgcacc
     1801 ggtcgttgcc gagccgttca ccaatccgcc tggctacaac tcgatcgccg ccaacacggt
     1861 cattttgaaa ggcgggccca gagcgaaccg gttcgtaacg gatcggcacg gagagccgat
     1921 caatcatcgg acagcgagcg tgcagcagtt catggatacc gaaaccgtgt ttgccggcac
     1981 gccggacgaa gtgttcgacc agatcaaaac cttcaacgcc cgcatgggag gcgtcggaca
     2041 tttgctgttc ttcggccagg gcggcctgct gacgcatcag gacgcgatgg agaacatccg
     2101 gctgttcggc aaggaagtcg cgccgaggct gctcgaactg cacgcccccg aacgcgctgc
     2161 ggccgagtga gcgacaccac ctcgttacgc ctcgaacgag cccagatcac cgatctggg
//
LOCUS       DATAVD010000940         3199 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1208512, whole genome shotgun sequence.
ACCESSION   DATAVD010000940 DATAVD010000000
VERSION     DATAVD010000940.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3199
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1208512"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2327
                     /locus_tag="VHX39_18045"
     CDS             <1..2327
                     /locus_tag="VHX39_18045"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX3993078.1"
                     /translation="ARRWYLAAMLTLLAGAAAAQPAPPVIELPPVEIIGASPLLGSGV
                     DRTKVPSEAQVMTSQDVTREGKPSYLNALQDQAQGVQLDSAAGGPFQPNLFYHGFQAA
                     PLQGTAQGLAVYLNGVRFNQAFGDTVNFDLIPDIAIDSMNIEGGSPVFGLNALGGSLA
                     IQLKNGFTYHGGEIDAFGGSFGQVGGAFQYGRQIGNFAAYVAVSGLKEDGWRYFQSSA
                     LKQFYGDIGWRSDKAELHLNIDIAQTTLQAPGTTPVEWLAVNPRAQFTGPSPTNNFYT
                     LVSANGNVQLNDTTSLQALVYYDYFLQRIGNGNTANFGSCNTLTGLLCEQGTDVVATD
                     RNGNPISDFLNGGPYSDWDSEVTNTNGYGTSAQVTNTDELFGHGNHFVAGASFDGSKT
                     LFGSTTGVGGLDPVTLNFLGPAGFPQGMIVDQADGTDAPVRLSVTTAYYGVYFTDTFD
                     ITSRLSANVSGRFNAEQIDLDDLLGTGLSGNHSYTRFNPGAGLTYRVIPGFGVYASYS
                     ESNRAPTPAELSCASPQSPCSLANFFTGDPNLKQVVAHTIEAGVRGRLTPFPSAKLDW
                     NVSLFHSNLDDDIAFVQSVVLGRGFFQNVGATRRQGIDAGLHLTTDRWLAWAGYTYTN
                     ATFQSAFTESSPENPGAAANGTVQVQPGDRLPGVPTHLLKLGVQYKVTDKWTVGVTGV
                     AASSQYLFGDEANLTKPLPGYFVVNFNTSYQITPNIQVYGLVQNVTDEKYYVYGTFTP
                     TSSITFLQAPGTSNPRSYNIAAPIAGFAGMKVTF"
     gene            complement(2405..2893)
                     /gene="bfr"
                     /locus_tag="VHX39_18050"
     CDS             complement(2405..2893)
                     /gene="bfr"
                     /locus_tag="VHX39_18050"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003624713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEX3993079.1"
                     /translation="MLRDSKVIEHLNIQLTNELTAINQYFLHARTLEHWGVTKLGKAE
                     YDESIGEMKHADDLIKRILFLDGLPNVQRLNPVQVGEDVEQILKADMALEEKALGDLR
                     EAIAYCEGVRDYVSRDLFLEILTSEEEHVDFIDRQFDLIKQIGIQRYILLNAGAAPEQ
                     EA"
     gene            complement(2965..>3199)
                     /locus_tag="VHX39_18055"
     CDS             complement(2965..>3199)
                     /locus_tag="VHX39_18055"
                     /inference="COORDINATES: protein motif:HMM:NF016230.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX3993080.1"
                     /translation="TGGRGSALTGEAAAVYICLCNALTDRQVKQAAATPGFSKPGDIY
                     AACGCRAQCGQCARALINLLRGDDTMPEPSTAN"
BASE COUNT          628 a         1010 c          928 g          633 t
ORIGIN      
        1 aggccaggcg atggtacctt gcggcaatgc taaccctgct cgccggtgcc gcagcggcgc
       61 agccggcgcc accggttatc gagctgccgc cggttgagat catcggcgcc tcgccgctgc
      121 ttggctctgg tgtcgatcgt accaaagtgc cgtcagaggc tcaggtcatg acgagccagg
      181 acgtgacgcg cgaaggaaag cccagttatc tgaacgcgtt acaggaccag gcacaaggcg
      241 tgcaattgga cagcgctgcg ggcgggccgt ttcagcccaa cctgttctat cacggctttc
      301 aggcagcacc gctgcaaggc accgcgcagg gactggcggt ttacctgaac ggcgtccgct
      361 tcaatcaggc gtttggcgac accgtcaact tcgatctgat cccggatatt gcgatcgact
      421 ccatgaacat cgagggcggc agccccgtat tcggcctcaa cgcactgggc ggttcgctgg
      481 cgatccagct aaagaatggc tttacttatc acggcggcga aatcgatgcc tttggcggtt
      541 ccttcggaca ggtcggcggc gcattccaat acggtcgaca aatcggcaat tttgccgcct
      601 atgtcgctgt gtccggcctg aaagaggacg gctggcggta ttttcagtcg tcagccctta
      661 agcagttcta tggcgacatc ggctggcgca gcgacaaggc cgagctccat ctgaacatcg
      721 atatcgcgca aaccacgctg caagccccgg ggacaacgcc ggtggagtgg ctggccgtca
      781 atcctcgggc gcagttcacc ggaccgagtc cgaccaacaa cttttacacc ctggtcagcg
      841 ccaacgggaa tgttcaactc aacgatacga cgtcgctgca ggcgctggtc tattacgatt
      901 attttctgca gcggatcggc aacggcaata ccgccaattt cgggtcgtgc aacacgctca
      961 ccgggttgct gtgcgagcag ggcaccgacg tggtcgcgac cgatcgcaac ggcaacccga
     1021 tctcggactt cctgaatggc ggcccttatt ccgattggga cagcgaggtg accaatacca
     1081 atggctacgg cacctccgct caggtcacca atacggacga gctattcggc cacggcaatc
     1141 atttcgtggc cggcgcaagt ttcgacggat cgaaaacctt gtttggatct accacggggg
     1201 tcggcggcct ggatccggtc acgctcaact tcctcgggcc ggccggtttc ccgcagggca
     1261 tgatcgtcga tcaggcagac ggcaccgacg caccggtgcg gctctccgtc acgaccgctt
     1321 actacggcgt ttactttacc gacacgttcg acatcacatc caggctgtcg gcaaacgttt
     1381 ccggccgttt caatgccgaa caaatcgacc tcgacgattt gctcggtacc gggctgtcag
     1441 gcaatcacag ctatacgcgg ttcaacccgg gagccggtct gacctaccgg gtcataccgg
     1501 gcttcggcgt ctatgcctcc tattcggaat ccaatcgcgc gccgacgccg gcggaactca
     1561 gctgtgccag tccgcagagc ccgtgcagcc ttgcgaattt cttcactggc gatcccaacc
     1621 tgaagcaggt cgtggcgcac acgatcgagg ccggcgtccg tggcaggctg acccctttcc
     1681 cgagcgccaa actggactgg aacgtcagcc tgtttcactc caatctggat gacgacatag
     1741 cgttcgtgca gagcgtcgtg ctgggccgag gctttttcca gaacgtcggg gcgacgcggc
     1801 gtcagggcat tgacgccgga ttacatctca ccaccgatcg ctggctcgcc tgggccggct
     1861 acacctatac caatgccaca ttccaaagcg ccttcaccga gtcgagtccg gagaaccccg
     1921 gagccgcagc gaacggcacc gtccaggtgc aaccgggcga tcgcctgccg ggcgtgccga
     1981 cgcatttgct caagctcggg gtgcaataca aggtgacgga taagtggacc gtcggggtga
     2041 cgggcgtggc agcaagcagc cagtacttgt ttggcgacga ggcgaatctg accaagccgc
     2101 tgcccggcta tttcgtcgtc aacttcaata ccagttacca gatcacgccg aatatccagg
     2161 tctatgggct ggtccagaat gtcacggatg agaaatatta cgtctacggg acgtttacac
     2221 caacttcgtc cattacgttc ctgcaggcgc caggcaccag caacccaaga agctacaaca
     2281 ttgctgcccc gatcgcggga ttcgccggta tgaaggtaac cttctgatcg ggcaggccgc
     2341 aaagctcccg gatcctccgc gacctcggag ttattgcctt aacccgcaac cccactgacc
     2401 cgtatcaggc ctcctgctcc ggcgccgccc ccgcattcaa caaaatgtac cgctggatcc
     2461 cgatctgctt aatcaaatcg aactggcgat cgatgaaatc gacatgctct tcctcgcttg
     2521 tcaggatctc cagaaacaga tcgcgagaca cgtaatcgcg cacgccctca caataagcga
     2581 tcgcttcgcg caggtcgccc aacgcctttt cctccaacgc catatcagcc ttcaggatct
     2641 gttcgacatc ctcgccgacc tgcaccgggt tgagccgctg cacgttgggc agaccgtcga
     2701 gaaacaggat gcgtttgatc agatcgtcgg catgcttcat ctcgccgatc gactcgtcat
     2761 attccgcctt gccaagcttc gtgacgcccc agtgctccag cgtgcgcgca tggagaaaat
     2821 actggttgat cgcggtcagc tcattggtga gctggatgtt gaggtgttcg atgactttgg
     2881 agtcgcgcag catggcagtc ctcgctggct ggttcgcgac gaccttccac tgtcacggcg
     2941 gcggctggca agagggatcg ggcgttaatt cgccgtgctc ggctccggca ttgtgtcatc
     3001 gccccgcagc aggttgatca gcgcccgggc gcattgcccg cattgcgcgc ggcagccgca
     3061 ggccgcgtag atgtcaccgg gtttgctgaa gccgggcgtt gcggcggctt gcttcacctg
     3121 gcggtccgtc agcgcgttgc agaggcaaat atacacggcg gcggcttccc cggttaaggc
     3181 ggaaccccga ccgcctgtg
//
LOCUS       DATAVD010000941         2073 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_648778, whole genome shotgun sequence.
ACCESSION   DATAVD010000941 DATAVD010000000
VERSION     DATAVD010000941.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_648778"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            206..282
                     /locus_tag="VHX39_18060"
     tRNA            206..282
                     /locus_tag="VHX39_18060"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:240..242,aa:Arg,seq:acg)
     gene            complement(309..>2073)
                     /locus_tag="VHX39_18065"
     CDS             complement(309..>2073)
                     /locus_tag="VHX39_18065"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX3993081.1"
                     /translation="SFLLAPLVSLLRRLYCGRVPSVLIAVLLALTVILALGGLIGTQL
                     AALADEVPRYALTIQQKVDTLQQLLASRITQLTASLGHKPAAGDVAPKTRPGAAGKAA
                     GEAQKPLEVELHQPDMTAIELARRIVTPVVEPLSTTAIVLIVSIFILLQREDLRDRMI
                     RLFGTSDLHRTTLAMNDAARRLSRYLLTQLAVNASFGVIIAVGLGFIGIPSPAMWGIL
                     GALLRFVPYVGAPLSALMPLTLAAAIDPGWSLVLWTAALYFVVEVILGQVVEPLLYGR
                     STGLSPFAVVVAATFWTWLWGPIGLILSTPMTLCLVVLGRHVARLEFLDVLLGDRPPL
                     TPVQSFYQRMLAGDPDEVRDQAEILLKEQSLASYYDQVVLNGLRLAVIDAERGVLTAV
                     QLARIKVSVQNLIEDLTDQHDDLPPVTDAGEASQVLPVPDEPATDRGTPRTLLCVAGR
                     GPLDEEASTMLAQLLDRQGLASRVIPHVATARGPIGTLDVSGVAMVCVSYVAMSGNPS
                     HLRYLIRRLRARLPRHVPVLVGFWPEEEAILQDDRIRAAVGADYYTSSLQEAVEQCQK
                     ILHEVSVAEPPSLITAIATTR"
BASE COUNT          409 a          677 c          666 g          321 t
ORIGIN      
        1 aaaatggtct gcgtaccgcc gatatcatgg cggcaggtag tgctcgggtc ggcaccgggg
       61 taatgggcga gtcgatcctg cgggagttgg acaaactcgc ggcttagcgg ccgtttgctg
      121 ggtcccgcgg tgatagaatt caggaatgga ggtggcttgg gggttgatac gggtggggtg
      181 ttcggctaca ccccgccgcc tgactgcgcc cgtagctcaa ttggatagag caccagacta
      241 cgaatctggg ggttggaggt tcgagtcctt ccgggcgcgc caacggggcg gagaaggtct
      301 gtgccaaatc accgggtcgt cgcaatcgcc gttatcagtg atggtggctc ggcgacgctg
      361 acctcgtgca ggatcttctg gcattgctcc acggcctcct gcagcgaact cgtgtagtaa
      421 tccgcgccaa ccgccgcacg tatccgatcg tcctgcaaaa tggcttcttc ctcgggccaa
      481 aacccgacca gcaccggcac gtgccgcggc aaacgcgccc gcagccgccg gatcagatac
      541 cgcaaatgag agggattgcc gctcatcgcc acgtaagaca cacacaccat cgccaccccg
      601 ctcacatcca gcgtgccgat cgggccgcga gccgtcgcca catgcggtat cacccgtgac
      661 gccagccctt gcctgtcaag cagttgcgcg agcatcgtcg atgcctcctc gtccaatggc
      721 ccgcgtccgg cgacgcacag caacgtcctc ggcgtccccc ggtcagtggc gggctcatcc
      781 ggcacaggca gcacctgact cgcttctccg gcatcggtga cgggcggcag gtcgtcatgc
      841 tggtcggtca gatcctcgat cagattttgg acggacacct tgatccgcgc gagctggacc
      901 gcggtcagaa cgccacgttc ggcgtcgatg accgcgagcc gcaggccatt cagcacgacc
      961 tggtcatagt acgacgccaa cgactgctcc ttcagcagaa tttcggcctg gtcgcggacc
     1021 tcgtccggat cgcccgcaag catccgctgg taaaagcttt gcaccggcgt caacggcggg
     1081 cggtcaccca gcagcacatc gagaaactcc agccgcgcca cgtgccggcc cagtacgacc
     1141 aggcagagcg tcatcggggt tgacaggatc agcccgatcg gcccccacag ccacgtccag
     1201 aacgttgccg ccaccacgac agcgaacggc gacaggccgg tgctgcggcc ataaagcagc
     1261 ggctcgacca cctggcccag gatcacttcg acgacgaaat agagggcagc ggtccacagc
     1321 acgagcgacc aaccgggatc gatggcggcg gccagagtca gcggcatcaa cgcagacagc
     1381 ggcgcgccga catagggcac aaagcgcagc agcgcgccaa ggatgcccca catcgccggc
     1441 gaggggatgc cgatgaagcc aagcccgacg gcgatgatga cgccgaacga ggcgttcacc
     1501 gcgagctggg tcaacaggta acgcgacaac cgccgcgccg catcgttcat cgcgagggtc
     1561 gtgcgatgca ggtcggaggt gccgaacagc cggatcatcc ggtcgcgcaa atcctcacgc
     1621 tgcaacaaga tgaagatcga cacgatcaaa acaatggcgg tggtggacag cggttcgacg
     1681 accggcgtga cgatccgtcg cgcgagttca atcgcggtca tgtcgggctg atgcagctcg
     1741 acctcgagcg gcttttgcgc ctcgccggcc gccttaccgg cagcaccggg cctggttttc
     1801 ggcgcgacat cgccggcagc cggcttgtgg ccaaggctgg cggtgagctg ggtgatgcgg
     1861 gacgccagga gttgttgaag cgtatcgacc ttttgctgga tcgtcagggc gtatctcggc
     1921 acctcgtccg ccagcgcagc cagttgcgtg ccgatcagac cgcccagcgc cagtatgacg
     1981 gtcagcgcca acagcacggc gatcaggacg gaagggaccc ggccgcagta cagccgccgc
     2041 aacaggctga ccagcggtgc cagcaggaac gac
//
LOCUS       DATAVD010000942         7000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3627705, whole genome shotgun sequence.
ACCESSION   DATAVD010000942 DATAVD010000000
VERSION     DATAVD010000942.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7000
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3627705"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..782
                     /locus_tag="VHX39_18070"
     CDS             <1..782
                     /locus_tag="VHX39_18070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX3993082.1"
                     /translation="TILRLLDPVEGSIRLSGHDISEIGQHALLPYRRRMQMVFQDPFG
                     SLNPRQTVATLLATPLKVHGRGNRSERRRRVRDIIARVGLPEDALDRYPHEFSGGQRQ
                     RIGIARALVLEPELIVCDEPVSALDLSIQAQILNLLVDLKRDLGLSYLFISHDLSVVR
                     YFADRVLVMYLGRIVESASHAALWREPRHPYTRALLAAVPQPDPERPRGPVALHGELT
                     AAEAGGCRFRARCPHAFDRCTSEDPVLRKVAAGHLAACHLA"
     gene            810..2423
                     /locus_tag="VHX39_18075"
     CDS             810..2423
                     /locus_tag="VHX39_18075"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3993083.1"
                     /translation="MSLDRTTPTRRAFLGATGGLVLGSRLAAAQGATTEIPAPKRGGS
                     MTIMFFSEPPSLVSLVSTNSLTCSAKVTEGLLWYDHDMQPHPQLATAWTISPDQLTYT
                     FTLRQGVKWHDGHDFTSADVAASLAILKKSHPRGRSTFAHVTSVQTPDDHTVVLKLDA
                     PIPYLIKAFAAAESPMVPKHIYDGTDPFTNANNNAPIGTGPFRFKEWARGDHVIYERN
                     ADYWDNPRPYLDQLVVKFIPDAASRSAALESGDVDLGYRTPVAYSDLDRLRAAGKLTF
                     ETKGYEYSNNVMSIEFNLDNPYLSKLPVRQAITHALNTAAICKIIYYGTFEPCASPIA
                     PFLKEYHDPAPTPYPFNIAEAEKLLDAAGYPRGAGGTRFHVMFEASPIVEESRRLGDF
                     VRAALSRVGIGVEVRASDVGSYIKRVYTDRDFDICCTSFSNLFDPTVGVQRIYWSKNI
                     LKGVPFTNTSYYRNARVDTLLETAATEPDPAKRVAEFMEFQQIVMHDAPDINVGVPHW
                     YTIHNKRALGHSVTADGIEGNFAFAYMAA"
     gene            2427..4517
                     /locus_tag="VHX39_18080"
     CDS             2427..4517
                     /locus_tag="VHX39_18080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX3993084.1"
                     /translation="MTIHSPAKLSADVGGTFTDIVLEHSGTRWTTKVLTTPAAPEQGV
                     LTGMHTALQQAGIALSAVGMFVHGTTLATNAIIERRGARTALIATDGFRDTLEIGTES
                     RYDQYELALARPKPLVPRPLRFTVRERIDARGKVLLALNEADVRAVAAGLREADVQSV
                     AVAFLHGYANDAHERRCEAILREIAPDLHVSLSSAVCPEIREYERTSTTVTNAYIQPL
                     IESYLLRMERRLQADGFRGVLCLMTSGGGLTSIDVARRFPVRLVESGPAGGAVFAAQI
                     AARLGERKVLAFDMGGTTAKISLIEDFRSETVRLFEVDRAARFLRGSGLPVRIPVIEM
                     VEIGAGGGSLARLDGLKRVTVGPDSASSVPGPACYGLGGTRPAVTDADLVLGLIDPND
                     FAGGSITLHPDQARTALSAAVGDRLGFSADMAAYAVYEMVCENMASAARVHTVERGVT
                     ASQHTMIAFGGAAPLHVARVAEKIGVQRVIVPPNAGVGSAIGFLAAPISYEMVRTTYM
                     RLGGFDHAVATGLLQEMADEVRGWVEPAAHGADLLEHRVAYMRYIGQGHEIAVELPLR
                     ELGPADDAVLRERYERDYETLFKRVIPNAAIEIMAWSVRIATATTLPDVAAVPEASVA
                     PEAGETTAVFDGRSGQTMQVPRYRREALVPGARFSGPAIVAEDETATFITAAFDAWID
                     GIGSIVMERKELTA"
     gene            4514..6187
                     /locus_tag="VHX39_18085"
     CDS             4514..6187
                     /locus_tag="VHX39_18085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX3993085.1"
                     /translation="MTIGLIDKQIMWNRLLALVEEQAQVLQRTAFSTIVRESGDLAAG
                     VFDAQGRMLAQAVTGTPGHINSMALAVGHVIAKHPTHTMRPGDVFIHNDPWIGTGHTN
                     DFSVTTPCFRGSEFVGILACNCHLMDIGGSRNMTGSLDVFMEGLFLPILRIVEEGVVN
                     ETLMSVIRANTRLPVETEGDTYALISCNEIGCERLTQMMDEFGLGDLGELSDHIIDTS
                     KAAMLEKIRELPRGRWSASLTLDGQDDEPVELRAALTVSDDGINVDYTGTSKMVRHNF
                     NVPLCYTLAYTTYALGCILARDIPNNAGSLEPRTVTAEEGSIVHATKPVAVVQRHLIG
                     LMLPDLIYGCLRQAIPERVPAEGAGVLWNISGFGPRHSPAVMGDDFLVNIVTTGGMGA
                     LPSQDGLSATGFPSGVRGGPVEIFESMSTLVFWRKQYREESGGAGTTRGGLGQHIELG
                     NSLPEAFNCTTFYERIHHPARGFFAGCAGASGYVGLASGRVLPGKGRHLVPKGDRIVI
                     LSPGGGGLGDPRKRDAALVRRDVENQLISAATARDIYGIDLKARAAAAE"
     gene            complement(6219..6527)
                     /locus_tag="VHX39_18090"
     CDS             complement(6219..6527)
                     /locus_tag="VHX39_18090"
                     /inference="COORDINATES: protein motif:HMM:NF013676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HEX3993086.1"
                     /translation="MTPLGTGTHPQRRSANHSPTTQGRSQSLSQTLANAMMLSNVADL
                     TDVLSVMAKDGQPVTATLVASISPYIRELIRRFGRFALEMENLLNPLNPQPLPFEITL
                     "
     gene            complement(6722..>7000)
                     /locus_tag="VHX39_18095"
     CDS             complement(6722..>7000)
                     /locus_tag="VHX39_18095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993087.1"
                     /translation="LNALRRRGRLVLMGSMTVVLPVPYLQLMMNSLEIMGNFMHPADA
                     YRNVLALVRAGKLDPAMITPKTYRLDELPAAMEAAEAANNLEAVVIKP"
BASE COUNT         1247 a         2263 c         2256 g         1234 t
ORIGIN      
        1 aaaccatcct gcggctgctg gacccggtcg agggcagcat ccgcctgagc ggccacgata
       61 tttcggaaat tggccagcac gcgctgctgc cataccggcg ccggatgcag atggtgttcc
      121 aggacccgtt cggctcgctc aatccgcgcc agacggtggc cacgctgctg gcgaccccgc
      181 tgaaggtgca cgggcgcggc aatcggtccg aacgccgccg ccgggtgcgc gacatcattg
      241 cccgggtcgg cctgccggaa gacgcattgg accgttatcc gcacgaattc tccggcggcc
      301 agcggcagcg catcggcatc gcccgcgccc tggtgctgga acccgaactg atcgtctgcg
      361 atgagccggt gtcggcgctc gatctgtcga tacaggcaca gatcctcaat ctgctggtcg
      421 atctcaagcg tgacctgggc ctcagctacc tgttcatctc ccacgacctg tctgtcgtgc
      481 gctatttcgc cgaccgcgtg ctggtcatgt acctcggccg tatcgtcgag agcgccagcc
      541 atgccgcgct ttggcgggaa ccgcggcacc cctacacgcg cgcgctgctg gccgcggtgc
      601 cacagcccga ccccgaacgc ccgcgcggac cggtcgcgtt gcacggcgaa ctgacggcgg
      661 ccgaagcggg gggctgccgc tttcgcgccc gctgcccgca cgccttcgat cgctgcacat
      721 ccgaggaccc agtgctgcgc aaggttgcag ccgggcacct cgccgcctgc cacctcgcat
      781 gaccaaattc caaccgaacc ggagatagca tgagcctcga ccgcaccaca ccaacacggc
      841 gggcattcct gggggccacg ggcgggcttg tcctcggctc ccgccttgcc gccgcccagg
      901 gtgcgaccac cgaaatcccg gcgccgaagc gcggcggttc catgaccatc atgttcttca
      961 gtgagccgcc ttcgctggtg tcgctggtca gcaccaacag cctgacctgc agcgccaagg
     1021 tgaccgaagg actgctgtgg tacgaccatg acatgcagcc gcacccgcaa ctcgccaccg
     1081 cctggaccat ttcgcccgac caactgacct ataccttcac gctgcggcaa ggtgtgaagt
     1141 ggcatgacgg ccacgacttc acgtcggccg acgtggcggc atcgctcgcc atcctgaaga
     1201 agtcgcatcc gcgcgggcgc agcacgttcg cccacgtcac gtcggtgcag acgccggacg
     1261 accacaccgt ggtgctgaag cttgacgccc cgatccccta tctgatcaag gcgtttgccg
     1321 cggctgaatc gccgatggtt ccaaagcaca tctatgacgg caccgacccg ttcaccaacg
     1381 ccaacaacaa cgccccgatc ggcaccggtc cgttccgctt caaggaatgg gcccgcggcg
     1441 accacgtgat ctacgagcga aatgccgact actgggacaa tccgcgaccg tatctcgacc
     1501 agcttgttgt caaattcatt ccggacgcgg cgtctcgttc ggctgccctg gaatcgggcg
     1561 atgtcgacct gggctatcgc acgccggttg cctacagcga cctggaccgg ctgcgggcgg
     1621 ccggcaagct gacgttcgag accaagggtt acgaatacag caacaacgtc atgagcatag
     1681 agttcaatct ggacaacccg tatctgtcca agctgccggt gcggcaggcg ataacccacg
     1741 cgctgaacac ggccgcgatc tgcaagatca tctactacgg cacgttcgaa ccgtgtgcgt
     1801 cgcccatcgc gccgttcctg aaggaatatc acgacccggc gccgacgccg tatccgttca
     1861 acatcgccga ggcggagaaa ctgctggatg cggccggcta tccacggggg gccggcggca
     1921 cgcggttcca tgtcatgttc gaggccagtc cgatcgtgga ggaaagccgc cgcctcggcg
     1981 atttcgtccg agccgcgctg tcccgcgtgg gcattggcgt cgaggttcgt gcatccgacg
     2041 tcggcagcta tatcaagcgc gtctacaccg atcgcgactt cgacatctgc tgtaccagtt
     2101 tcagcaacct gttcgatccg accgtcggcg tgcagcgcat ctactggtcg aagaacatcc
     2161 tgaagggtgt gccgttcacc aacacgtcgt attaccgcaa tgccagggtg gataccttgc
     2221 tggaaacggc ggcgaccgag ccggacccgg cgaaacgcgt ggcggaattc atggagttcc
     2281 agcagatcgt catgcacgac gcgcccgaca tcaacgtcgg cgttccccac tggtacacca
     2341 tccacaacaa gcgcgccctg ggccattcgg tcacggcgga cggcatcgag ggcaatttcg
     2401 cttttgccta catggcggcc tgaccgatga ccattcatag ccccgccaaa ctgtcggccg
     2461 acgtcggcgg caccttcacc gacatcgtgc tggagcacag cggtacacgc tggaccacca
     2521 aggtgctgac cacgccggcc gcgccggagc agggcgtgct gaccggcatg cacacagccc
     2581 tgcaacaagc cggcatcgcg ttgtcggcgg tcggcatgtt cgtccatggc accacgctcg
     2641 ccaccaacgc gatcatcgaa cgccgaggcg ccaggaccgc gctgatcgcc accgacggct
     2701 tccgcgacac gctggagatc ggcaccgaga gccgctacga ccagtatgaa ctcgcccttg
     2761 ccaggccaaa gcctctggtg ccacggcccc tgcggttcac ggttcgggag cgtatcgacg
     2821 cccgtgggaa ggttttgctg gcgctgaacg aggcggacgt gcgggcagtg gccgccgggt
     2881 tgcgggaggc cgacgtccaa agcgtcgctg tcgccttcct gcacggctat gccaacgatg
     2941 cgcatgagcg gcgttgcgag gcgatcctgc gtgagatcgc gccggacctg catgtgtcgc
     3001 tttccagcgc ggtctgcccg gaaatacgcg aatacgagcg cacgtccacc accgtcacca
     3061 acgcctatat ccagcccttg atcgaaagct acctgctgcg catggaacgg cgcttgcagg
     3121 cagacgggtt ccgcggcgtg ctgtgcctga tgacctccgg cggcggcctg acatcgatcg
     3181 acgtcgcccg ccggtttccg gtccggctgg tggaatccgg ccccgccgga ggcgccgtct
     3241 tcgccgccca gatcgccgct cggttgggcg agcgcaaggt cctcgccttc gacatgggcg
     3301 gcaccaccgc caagatcagc ctgatcgaag attttcgttc ggaaaccgtt cgcctgttcg
     3361 aggtcgatcg ggctgcccgg tttctgcgcg gcagcggatt gccggtgcgc atccccgtca
     3421 tcgagatggt ggagatcggt gccggcggcg gttcattggc tcggttggat ggtttgaaac
     3481 gcgtcacggt cggccctgac agtgcgtcct cggtgccggg accggcctgt tatggattgg
     3541 gaggcacccg gccggcggtt accgatgccg acctggtcct ggggctgatc gatccgaacg
     3601 acttcgccgg cgggtcgatc accttgcacc ccgatcaggc tcggaccgcg ttgtctgccg
     3661 cggtgggcga cagactgggg ttcagcgccg acatggcggc atacgcggtt tacgagatgg
     3721 tctgcgagaa catggccagc gccgcccgcg tccacaccgt ggagcgtggc gtcacggcga
     3781 gccagcacac catgatcgcg ttcggcggcg ccgcccccct gcatgtcgcc cgcgtggcgg
     3841 agaaaatcgg cgtccagcgg gtcatcgtcc cacccaacgc cggggtcggt tcggcgatcg
     3901 gcttcctggc cgcgccgatt tcgtatgaga tggtgcgcac gacctacatg cgcctcggcg
     3961 gcttcgacca tgccgtcgcc accggtctgc tgcaggagat ggcggacgag gttcgcggct
     4021 gggtcgaacc ggcggcgcat ggcgcggacc tgctggaaca ccgtgtcgcc tacatgcgct
     4081 atatcggcca ggggcacgag atcgcggtcg aattgccgct gcgcgaatta ggccccgcgg
     4141 acgatgccgt gctgcgggaa cgatacgaac gcgactacga gacgttgttc aagcgtgtca
     4201 tccccaatgc cgcgatcgag atcatggcgt ggtcggttcg gatcgccacg gcgaccacgc
     4261 tgccggacgt ggcggcggtg cccgaggcgt ccgtcgcgcc agaggccggc gagacgacag
     4321 cggtgttcga tggccgctcc ggccagacca tgcaggtccc ccgctaccgg cgcgaagcgc
     4381 ttgtgccggg tgcccgtttt tccggcccgg ccatcgttgc cgaggacgaa accgccacct
     4441 tcatcaccgc cgcgttcgac gcctggatcg acggcatcgg ctctatcgtc atggaacgca
     4501 aggaattgac cgcatgacca tcggcctgat cgacaagcag atcatgtgga accgactgct
     4561 ggcgctggta gaagagcaag cgcaggtgct gcagcgcacc gcgttcagca ccatcgtccg
     4621 cgagtcgggc gatctcgcgg ccggcgtctt cgatgcgcaa gggcggatgc tggcgcaagc
     4681 cgttaccggc acgcccgggc acatcaactc catggcgctc gcggtcggcc atgtcatcgc
     4741 caagcatccg acgcatacga tgcggcctgg cgatgtgttc atccacaacg atccgtggat
     4801 cgggaccggc cataccaacg acttttccgt caccacaccg tgctttcgcg gctcggaatt
     4861 cgtcgggatc ctggcgtgca actgccacct gatggatatc ggcgggtcgc gcaacatgac
     4921 cggctcactg gatgtgttca tggaagggct gttcctgccg atcctgcgca tcgtcgagga
     4981 aggggtggtg aacgagaccc tgatgtcggt catccgcgcc aacacccgcc tgccggtgga
     5041 gacggagggc gacacgtatg cgctgatctc ctgcaacgaa atcggctgcg agcgactgac
     5101 gcagatgatg gacgagttcg gtctcggcga tcttggcgag ttgtccgacc acatcatcga
     5161 tacgtcgaaa gcggcgatgc tggagaaaat ccgcgaattg ccgcgtggcc gctggtccgc
     5221 cagcctgaca ctggatgggc aggacgacga accggtggaa ctgcgggccg cgctgacggt
     5281 gtcggacgac gggatcaacg tcgattacac cggcacgtcg aaaatggtgc ggcacaactt
     5341 caacgtaccg ctttgctata cacttgccta tacgacgtat gcgctcggat gcatcctggc
     5401 gcgcgatatc ccgaacaatg cggggtcgtt ggagcctcgg acggttacgg cggaggaagg
     5461 atcgatcgtt cacgcgacaa aacccgtcgc ggtcgtgcag cgccatctga tcgggctgat
     5521 gctaccggac ctgatctacg gctgcctgcg tcaggcgatt ccggagcgtg tgccggcgga
     5581 aggtgccggc gtgctgtgga acatcagcgg attcgggcct cgccacagcc ccgcggtgat
     5641 gggtgacgac ttcctggtca acatcgtcac caccggcggc atgggcgcgc tgccgtcgca
     5701 ggatgggctt tccgccaccg gctttcccag cggcgtccgc ggtgggccgg tcgagatctt
     5761 cgaatcaatg tccaccctgg tcttctggcg caagcagtac cgcgaagagt ccggcggcgc
     5821 cggcaccacg cggggcggtc tcggccagca catcgaactt ggtaacagcc tgcccgaggc
     5881 gttcaattgc accacgttct atgaacgcat ccaccatccg gcgcgggggt ttttcgccgg
     5941 ctgcgccggg gcgtcgggat atgtcggcct ggcctcgggc agggtgcttc cgggcaaggg
     6001 tcggcatctt gtgccgaagg gagaccggat tgttattctg tcgcccggcg gcggcggtct
     6061 cggcgatcca agaaagcgcg atgcggcact cgtccggcgg gatgtggaaa accagcttat
     6121 ctccgcggcg accgcccggg atatctacgg catcgacctt aaggcccggg ccgcggccgc
     6181 agaataaggg gtaagttgaa gatacgtgta aaaagtggtc acaaggtgat ctcgaatgga
     6241 agcggctgcg gattgagcgg gttcagcaga ttctccatct cgagggcaaa cctgccgaag
     6301 cgacggataa gttctcggat ataggggctg atactggcga ccagagtggc ggtgacgggt
     6361 tgcccatcct ttgccatgac ggacagaacg tcggtcaggt cggcgacatt ggacagcatc
     6421 attgcattgg ccagagtctg gctcaaactc tgtgaccggc cctgtgtcgt tggcgagtgg
     6481 tttgccgatc ggcgctgggg atgggttcct gtccccaacg gcgtcaaagc ccttgaagga
     6541 ccaacttagc atgcatgaag ctaagtcatg cgaagccgga cagccaaagc cgaagtccac
     6601 ttctctactg gccgattggg gcgagagcgc tttatcggcg tggtccgcgt gcgggatcgg
     6661 gtcggcgaaa aggggcggct ggcgcgtgtg gagcggcaga agcaaatgtg cattccaaat
     6721 ctcagggttt gatcacgacg gcttcaaggt tattcgcagc ttcggccgct tccatggctg
     6781 ccggcagttc gtcgagccga taagtcttcg gtgtgatcat tgcggggtcg agtttaccgg
     6841 cgcgcaccaa ggcgagcacg ttcctgtagg cgtcggcggg gtgcatgaaa ttgcccatga
     6901 tctccaggct gttcatcatc agttgcaagt agggcacggg cagcacgacg gtcatgctgc
     6961 ccatcagcac gagacggccg cggcggcgaa gcgcgttcag
//
LOCUS       DATAVD010000943         1937 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2136913, whole genome shotgun sequence.
ACCESSION   DATAVD010000943 DATAVD010000000
VERSION     DATAVD010000943.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1937
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2136913"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..799)
                     /locus_tag="VHX39_18100"
     CDS             complement(<1..799)
                     /locus_tag="VHX39_18100"
                     /inference="COORDINATES: protein motif:HMM:NF015655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993088.1"
                     /translation="MMSARQTGWPAAYDDAAAGRLLERFAAIGRAEARLTTRSDAVAL
                     LRCLGGNSPYLSDLALREAGAVARFLVDGPDATLAAAMAPIAQMKPGARRDRVAAVMR
                     QAKRQVALVCALADISGHWTLEQVTGALSALAEATLSLAVAHLLRAAHDVGDLMLPNP
                     ENPAAGGGFTVLGMGKLGARELNYSSDVDLVLMFDPAAPIYTERTADHAMVGFAARIA
                     RGLVGLMETRDADGYVFRTDLRLRPDPAATPPAIAIDHAILYYESMGQ"
     gene            880..>1937
                     /locus_tag="VHX39_18105"
     CDS             880..>1937
                     /locus_tag="VHX39_18105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993089.1"
                     /translation="MLRHTGRAAAQIGQTVHHVCHFMLTFVLVLTLVAVGGAWRLSRG
                     PVDLGFLRKRIETSVNNSIAPARVTIGSASIAWGGFSHGLDQPLVLRVTDLTVEPSGG
                     PRAIHVPVAEATLSARWMLIGRILPRTITLEGAQLLLMRDADGSFSFDIGSLDIAGAS
                     KRTGHSPLIGLLAVLGAPRLTDLQEGGRRLSQLSEVSIHAATLLLDDRRLGMTWAADP
                     ADIDLFRHRGGGMDGRATLAVALGGQHAVLTSIFHLAPAARSVHVEATLSQITPKELA
                     GSAPILAPLAAVDVPLTVSGEADLGPDLIPTHMQLSAQAGAGRVTTGTGSIPIRSAAF
                     SIAGTQEKAELEHAKVEL"
BASE COUNT          320 a          627 c          649 g          341 t
ORIGIN      
        1 tctggcccat gctttcgtag tagagaatgg catggtcaat ggcgatcgcg ggtggcgtcg
       61 ctgccgggtc cgggcgcagc cgcaaatcgg tgcgaaaaac gtagccgtcg gcgtcgcgag
      121 tctccatgag ccccacaaga ccgcgggcaa tgcgggccgc aaaccccacc atggcgtgat
      181 cggccgtccg ctcggtataa atcggcgctg cgggatcaaa catcaggacg aggtcgacat
      241 ccgacgagta attcaattcc cgtgccccga gcttgcccat cccgaggacg gtaaacccgc
      301 caccggccgc gggattttcc gggttgggaa gcatcaggtc gccgacgtca tgcgcggcgc
      361 gcagcagatg cgcgaccgcc aggctgagcg tggcctcggc cagggccgac agcgcacccg
      421 tcacttgctc cagcgtccaa tggccactga tatctgccag ggcgcagacc agtgcgacct
      481 ggcgcttggc ctgacgcatc actgctgcaa cccggtcccg ccgcgcaccc ggcttcatct
      541 gggctatcgg ggccatcgcg gcggccagcg tcgcgtccgg gccatcaacc aggaatcggg
      601 ccacggcgcc ggcctcccgc agcgcaaggt cgctcaaata gggactgttg ccgccgagac
      661 agcgcagcag tgcaaccgca tcgctgcgtg tggtcaggcg ggcctcggct cggccgattg
      721 cggcgaagcg ttccagcaga cggccggcgg cggcatcgtc gtatgccgct ggccatccgg
      781 tctggcgcgc gctcatcatg cgacgagggg ctttgcgacg gggttccggc ggtcaatcca
      841 ggttgccatg gggcgtggct atagcatcgg agtctgcccg tgttgagaca cacgggccgt
      901 gcagcggcgc aaatcgggca gaccgtgcac cacgtctgcc atttcatgct gacgtttgtt
      961 ctggtgctga ccctggtggc cgtcggcggc gcatggcgtc tctcccgagg gccggtggat
     1021 ctcggcttcc tcaggaagcg catcgaaacc tcggtgaaca acagtattgc cccggcgcgg
     1081 gtgacgatcg gctctgcgtc gatcgcgtgg ggcggcttca gtcacggact ggatcaacca
     1141 ttggtcctgc gagtgaccga tttgacggtc gagccgtcgg gtggtcctcg cgccatccac
     1201 gtcccggtcg cggaagcaac cttgtctgcc cgctggatgt tgatcggccg aattttgccg
     1261 cgaaccatca cactggaagg cgctcaactc ctgctgatgc gcgacgcgga tggatcgttc
     1321 agtttcgata tcggcagtct cgacattgcc ggcgcgagca agcgcaccgg gcattcgccg
     1381 ctgatcggtc tcctggcggt actgggcgca ccccggctga ccgatctgca ggagggcggc
     1441 aggcggctga gtcaactgtc ggaagtgtcc attcatgcgg cgacgttgct gctcgatgac
     1501 cggcggctgg gtatgacctg ggctgccgat ccggcggata tcgatctgtt ccgccatcgc
     1561 ggcggcggca tggatgggcg cgccacgctg gcggtggctc tgggtgggca acatgccgtg
     1621 ctgaccagca tcttccacct cgcgccggcg gcacgatcgg tgcacgtcga ggcgacccta
     1681 tcccaaatca ccccgaagga gctggccggt tcagccccaa ttctggcacc tctggcggcg
     1741 gtggatgtgc ctttgaccgt ttccggtgag gcggacctcg gacctgacct gatcccgaca
     1801 catatgcagc tcagcgcaca ggcgggtgcc gggcgggtta ccacgggcac aggatcgatc
     1861 cccatccgca gtgccgcatt ctcgatcgcg ggcacccagg aaaaggctga actcgagcac
     1921 gccaaggttg agttgca
//
LOCUS       DATAVD010000944         3559 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3252102, whole genome shotgun sequence.
ACCESSION   DATAVD010000944 DATAVD010000000
VERSION     DATAVD010000944.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3559
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3252102"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..275
                     /locus_tag="VHX39_18110"
     CDS             <1..275
                     /locus_tag="VHX39_18110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3993090.1"
                     /translation="FYGTKGPFWSMPTMILTGSAAAGGIAFINAFGNIGGALGPAIVG
                     WLKNTTGSYAGGLYGLAVFTGASALIALLSLNIPRRVGVPIAAPAE"
     gene            complement(318..602)
                     /locus_tag="VHX39_18115"
     CDS             complement(318..602)
                     /locus_tag="VHX39_18115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993091.1"
                     /translation="MTQDDKRIIDMTIEGEFVAPPRQPKPPIGARIMLWAIVAMVLAI
                     TALIVAVTFWFVVMLLPLILAAALIAYLAFRYQLWRGGRTFVIRRGPPNW"
     gene            688..1665
                     /locus_tag="VHX39_18120"
     CDS             688..1665
                     /locus_tag="VHX39_18120"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3993092.1"
                     /translation="MQVGLFINTQFPEGYDVAARVPEMVEQVRVARDAGFKSLWFPHH
                     WLTYPMQMLQITPVMAYIAAHAQGMTIGPNILILPPQNPMHVAEESATLDVLTGGNYV
                     LGLGLGYRQPEFDAFGIPLSERAPRFNESIALMKRLWTEDKVTHQGRFYTVNDAGIGV
                     KPLRAGGPPLYIAGQADVSVRRAARIGDAWLIVNSSGLSKTAPLMKTYRAALAEYGRT
                     ATDFPITVECYVGERHATAHEECREPLQYKYNAYAAWGLEGRAKSELPFEDFARDKFI
                     IGDKVSVKEEIARYHELLGVNHFIMRCQWPGLPVERTLASIKRLGEIFA"
     gene            complement(1708..2604)
                     /locus_tag="VHX39_18125"
     CDS             complement(1708..2604)
                     /locus_tag="VHX39_18125"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HEX3993093.1"
                     /translation="MQLGASLPVGDIGTGPAVIRDYAQTLEGLGFNYIQAPDHVLGGN
                     PTGHKDKKRVGTSTTAYHDPFVLFSFIAGCTDKIGFAPGVLILAQRQAVLVAKQAASL
                     DELSNGRLRLGVGVGWNEVEFTGLNENFHNRGKRSEEQVQVMQALWANPHVDFKGKYH
                     TIDDSGINPRPKSGRVPVWFGGHVDATLERTAKWGDGWMPLAYPADDTALAAFEKLRG
                     LIRAAGRKQEDVGIEVWCSLGNANPDEWRKEVTFWKNAGVTHVTAHTTYANNHHKRIA
                     GKTAAEHLAAIRSFQDAVRDLL"
     gene            complement(2636..>3559)
                     /locus_tag="VHX39_18130"
     CDS             complement(2636..>3559)
                     /locus_tag="VHX39_18130"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HEX3993094.1"
                     /translation="GHVGGESPMQLGHLVPFGDIGGDPDTVRDYAQGLEALGYDFMEA
                     PDHVLGANAGSRPGWEAGRNTSDDLFHDPFVLLGYVTGIAPKLGFSTGVLIVAQRQTA
                     LVAKQAACLDVLCKGRFRLGIGVGWNEVEFVGLNENFHNRGRRSEEQAQVMEMLWANQ
                     HVTFKGRYHTIDDAGINPRPASGKVPLWYGGHHEKTLPRIAKWGDGWMPNAYPPDQTA
                     IEIFSRLRRLTEAAGRDPASVGIEVWTSCGAGSAADWRKEAAFWQAAGASHICLTTTF
                     HRRHHHRIAGKSLSDHLAALKRYRDAVADFL"
BASE COUNT          675 a         1081 c         1104 g          699 t
ORIGIN      
        1 ggttctacgg caccaagggc ccgttctggt caatgccgac gatgatcctg acgggttccg
       61 cggcggccgg cggcatcgcg ttcatcaatg cattcggcaa tatcggtggc gcacttgggc
      121 cggcgatcgt gggttggctg aaaaacacca ccggcagtta tgccggcgga ctgtatgggc
      181 tcgccgtgtt caccggggcc agcgcgctga tcgccttgct cagtctgaac atcccgcgcc
      241 gggttggcgt gccgatcgct gcaccggcgg agtaggccgg cctcgccatt ggggcatgag
      301 cagggggcgc ctggcgccta ccagttgggc gggccgcgcc tgatcacgaa ggtgcgcccg
      361 ccgcgccaaa gctggtagcg gaacgcaaga taagcgatca gtgctgcggc caggatcagc
      421 ggcagcagca tcaccacgaa ccagaacgtc acggcgacga tcagcgccgt gatagccagc
      481 accatcgcca caatggccca gagcatgatc cgggcgccaa tcggcggttt tggctggcgc
      541 ggaggcgcca cgaactcgcc ttcgattgtc atgtcgatga tgcgtttgtc gtcctgggtc
      601 atcccgcaaa ggtggcagta gccaggccca gcttcaagcc caggtgaacg cggtctatgc
      661 tgcggggaga cgcaggaggg ttccggaatg caggtcggac tgttcatcaa cacacaattt
      721 cccgaggggt atgacgtcgc ggcccgagtg ccggaaatgg tcgagcaggt ccgcgtcgcg
      781 cgtgatgccg gtttcaaatc gctttggttc ccgcaccatt ggctgacata tccgatgcag
      841 atgctgcaga tcacgccggt gatggcctat atcgcggcgc atgctcaggg gatgacgatc
      901 gggcccaata ttctgatcct gccgccgcag aatccgatgc atgtcgccga ggagtctgcc
      961 accctcgatg tgctcaccgg cggcaattac gttctcggac tgggccttgg ctatcgccag
     1021 cccgagttcg atgcgttcgg cattccgctg tcggaacgag cgccgcggtt caacgaaagt
     1081 atcgccttga tgaagcggtt gtggaccgag gataaggtca cccatcaggg ccgtttttat
     1141 acggtgaacg atgccggtat tggcgtgaag ccgcttcggg ccggtggacc tccgctgtat
     1201 atcgccggcc aggccgatgt atcggtgaga cgtgcggcac ggatcggcga tgcatggttg
     1261 atcgtcaaca gcagcggcct gagcaagact gctccgctga tgaagaccta ccgcgcggcg
     1321 ctggcggaat atggacggac cgccaccgac tttccgatca ccgtagaatg ttacgtgggc
     1381 gagcgtcatg ccacagcaca cgaggagtgc cgggaaccat tacagtataa atacaacgcc
     1441 tatgccgcct ggggtctcga gggccgcgca aagtccgagc tgccgtttga ggattttgcg
     1501 cgcgacaagt tcatcatcgg cgacaaggta tccgtcaaag aggaaatcgc ccggtatcac
     1561 gaactactgg gcgtcaacca cttcatcatg cgctgccaat ggcccggcct gccggtcgag
     1621 cgcacactgg catcgatcaa acgactgggt gagatttttg catgaggcgg cgtcgtggcc
     1681 ggatcaggcc accacgtttc tttgcgccta caacaagtct ctcaccgcgt cctgaaagct
     1741 tctgatcgcg gccaggtgct ccgccgccgt cttgcccgcg atccgcttgt gatggttgtt
     1801 ggcataggtt gtgtgcgccg tcacatgcgt cacgccggcg ttcttccaga acgtcacctc
     1861 tttgcgccat tcgtccggat tggcgttgcc aagagagcac cagacttcaa tgccgacgtc
     1921 ctcctgcttg cgtccggcgg cacggatcaa tccgcgcagt ttctcgaacg cggccaaggc
     1981 ggtgtcgtca gccggatagg ccagcggcat ccagccatcg ccccattttg cagtacgttc
     2041 caacgttgca tcgacatggc cgccgaacca aaccggcacg cggccggatt tcggccgtgg
     2101 attgatgccg gaatcgtcga tcgtgtgata cttgcccttg aagtcgacat gcggattggc
     2161 ccacagcgcc tgcatcacct ggacctgttc ctcggatcgc ttgccgcgat tgtggaagtt
     2221 ttcattaagc cccgtgaatt ccacttcgtt ccagccaacg ccaacaccaa gacgcaggcg
     2281 gccattggag agttcatcca ggctggcggc ctgcttcgcc accaggacgg cctgacgttg
     2341 ggccagaatc aacacgcccg gtgcgaagcc aatcttatcg gtgcagccgg caatgaaact
     2401 gaacagaacg aacgggtcat gataggcggt ggtcgaggtg ccgacccgct tcttgtcctt
     2461 gtgtcccgtt ggattgccgc caagcacgtg atccggcgcc tggatatagt tgaagcccag
     2521 accttccaaa gtctgtgcat aatcgcggat aaccgcgggt ccggtgccga tatcgccgac
     2581 cggaagagat gcgccaagct gcatggttct tgtcctttgt tacagaaggt cggggttaca
     2641 gaaagtcggc aaccgcgtcg cggtagcgtt tcagtgcggc caggtgatcg ctcagggatt
     2701 tgccggcgat gcggtgatgg tgccggcggt ggaacgttgt cgtcaggcaa atatgcgagg
     2761 caccggcggc ttgccagaac gctgcctctt tgcgccagtc ggccgccgag ccggcaccgc
     2821 acgatgtcca cacttcgatg ccgacggatg ccggatcgcg acccgctgcc tctgtcaggc
     2881 ggcgcaaccg ggaaaagatt tcgatcgccg tttgatccgg cggatacgca ttgggcatcc
     2941 aaccgtcgcc ccatttggca atgcgcggca gcgttttctc gtggtgcccg ccgtaccaca
     3001 gcggcacttt gcccgacgcc ggccgaggat tgatgccggc atcgtcgatc gtgtgatagc
     3061 ggcctttgaa cgtcacgtgc tggttggccc acagcatttc catcacctgc gcctgttcct
     3121 cggaacgacg cccgcggttg tggaaatttt cgttcaggcc aacgaactcg acctcgttcc
     3181 aaccaacgcc gatgccaagc cggaagcggc ccttgcacaa tacgtcgaga caggcggcct
     3241 gtttcgcgac cagtgcggtc tgccgctgcg cgacgatcag cacaccagtg gaaaagccta
     3301 gtttcggtgc gataccggtg acgtagccaa gcagaacgaa cgggtcatgg aacaaatcgt
     3361 cggaggtatt gcgtcccgct tcccaacccg gccgcgagcc ggcattggcc cccaacacgt
     3421 gatcgggggc ctccatgaag tcgtagccaa gcgcttcgag gccttgtgcg taatcgcgca
     3481 ccgtatcggg gtcgccgccg atatcgccaa agggtacgag gtgtccgagt tgcatgggag
     3541 attctccacc gacatgtcc
//
LOCUS       DATAVD010000945         2208 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1209169, whole genome shotgun sequence.
ACCESSION   DATAVD010000945 DATAVD010000000
VERSION     DATAVD010000945.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1209169"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1283
                     /locus_tag="VHX39_18135"
     CDS             <1..1283
                     /locus_tag="VHX39_18135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993095.1"
                     /translation="CLLFCVALSIARATAAGPYSQGLNDPTNIYDAPVPGFVGPDGIG
                     GSRISNGSGGFMSPDNYVNPLFFDWAASVTNYSPAPGVGSSWSNPSLALGPVTGLNTD
                     VVSLGDLSAAQIASGTPVGTLTLYFSHPIQNLDGADFVVFENSFIASFGTGGYGVGGV
                     DADLAYVEVSSDGVNFVRFPSQSLTPGAVGMYGTIDPTNVYNLVGKHVNAYGQSWGTP
                     FDLSEVGLSSISFIRIVDIPGSGAFLDSSGRPIYDAWETIDSAGVDIEAIGTISRLVD
                     FSDWQTLNNLTGARLGATTVAGTDGVPNLLEYASGRQPAHVAPNPGLTSVALQGGNMV
                     LTFTRDERASDLLYEVQVSNTLNNPTWTTIASSTGGQFTTGANGFSPAITEASASTIT
                     SVGVLRQVNVTDVVPVSSQPQRFMRVKVSLVSGS"
     gene            1286..2158
                     /locus_tag="VHX39_18140"
     CDS             1286..2158
                     /locus_tag="VHX39_18140"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEX3993096.1"
                     /translation="MRDRSAAAKIPRGASPSSYRSHLSYLSHCPAAFTLLELLVVISI
                     IAILAGLALPVFRQAKMHAMAAQSSNNLRQLVSANLAYVADHGCYAPAYDITNNRLWC
                     GARTSGTSGYDPTQGYLAPYLGYSKMITPDPLFTNMITGSASFEDGSGGYGYNEVYIG
                     GTPSYAYNADGSLMSATPAQVQLPTETIMFATTAYAVAGGVQEYPFAEPPFWDFGDGP
                     TSYRPSPSVHFRFNNKAIVAWCDGHTSMEVMTPRADGYNPNGGDANAQNLGWFGPDLD
                     NGYWKPTHDTPPSQ"
BASE COUNT          386 a          784 c          588 g          450 t
ORIGIN      
        1 attgtctgct gttctgtgtc gcgctttcga tcgcgcgtgc gaccgcggcc ggtccttact
       61 cgcagggact gaacgatccc acgaatatct acgatgcccc cgtgcccggc tttgtcgggc
      121 cggatggcat tggcggttct cggatttcca atggatcggg cggcttcatg agtcccgata
      181 actatgtgaa cccgctcttt ttcgattggg cggcctcggt gacgaactat tcgcccgcgc
      241 ccggtgtggg cagttcatgg agcaatccca gtctcgcgct cggaccggtg acaggcctca
      301 ataccgacgt ggtttccctt ggcgatctct ccgccgcgca gattgcttcc ggcacgccgg
      361 tcggcactct taccctctat ttcagccacc ccattcaaaa cctcgatggc gctgatttcg
      421 tcgtcttcga aaacagcttc atcgcctcct tcggcacggg cggatatggg gtggggggag
      481 tcgacgccga cctcgcctat gtggaagtct ccagcgatgg ggtgaacttc gtccggtttc
      541 cttcccaatc gctcacgccc ggcgccgtcg gcatgtacgg caccatcgac ccgacgaatg
      601 tctataacct cgtcggcaag cacgtgaatg cctacggcca atcgtggggc acccccttcg
      661 atctctccga ggtcgggctc tcgagtatta gtttcatccg catcgtcgat atcccgggca
      721 gtggcgcgtt cctcgattcc tccggacggc ccatctacga cgcctgggaa acgatcgact
      781 ccgccggcgt ggatattgag gccatcggga cgatctcccg cctcgtggac ttcagcgact
      841 ggcagacctt gaacaatctc accggtgcga ggctcggagc cacgacagtc gccggcacgg
      901 atggcgtgcc caacctgctg gaatacgcct ccggccgcca accggcccac gtcgcgccca
      961 acccgggcct aaccagcgtt gccctgcaag gcggtaacat ggtcctgacc ttcacccgcg
     1021 atgaacgggc gagcgacctg ctttacgaag tgcaggtttc caacacgctc aataacccga
     1081 cctggaccac catcgcgtcg agcaccggcg gccagttcac caccggcgcc aacggctttt
     1141 cgcctgccat taccgaagcc agcgccagca ccatcaccag cgtcggcgtc ctccgccagg
     1201 tcaacgtcac cgacgtggtc cccgtctcct ctcaaccgca gcgctttatg cgcgtgaaag
     1261 tctccctcgt ttccggctcc tgagcatgcg cgaccgatcc gccgcggcca aaattcctcg
     1321 cggggcgtct ccttcgtcct atcggtccca tttgtcttat ttgtcccatt gccccgcggc
     1381 attcacgctc ctcgagcttc tggtcgtgat ctcgatcatc gccatcctgg ccggtctcgc
     1441 gcttccggta tttcgccagg caaaaatgca tgccatggcc gcgcaaagca gcaacaacct
     1501 gcgccaattg gtctcggcca atctcgccta cgtcgccgac cacggatgtt atgccccggc
     1561 ctacgacatc actaacaacc gcctttggtg cggagcgcgc acctcgggca cctcgggtta
     1621 tgatcccacg caggggtatc tcgcccctta tctcggttac tcgaaaatga ttacgcccga
     1681 cccgctgttc acgaatatga tcaccggcag cgcttcattc gaggacggct ccggcggtta
     1741 cggttacaat gaggtctaca tcggcggcac gccgtcctac gcttacaatg cggatggctc
     1801 gctcatgtcc gccacccccg cccaagtgca gcttccgacc gagacgatca tgttcgccac
     1861 cactgcctac gcggtagccg gcggcgtcca ggaatatccc ttcgccgaac cgcccttctg
     1921 ggatttcggc gacggcccca cgagttaccg gccctccccg agcgtccatt tccgattcaa
     1981 caacaaagcc atcgtcgcct ggtgcgacgg ccacaccagc atggaggtca tgacccctcg
     2041 cgcagatggc tacaacccga acggcggcga cgccaacgcg caaaatctcg gctggttcgg
     2101 ccccgacctc gacaacggct actggaagcc gacccacgac accccgcctt cccagtaacc
     2161 gcgccggcct aatccgccgg ccattctttt tctgctccgg cggatttg
//
LOCUS       DATAVD010000946         1834 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1392189, whole genome shotgun sequence.
ACCESSION   DATAVD010000946 DATAVD010000000
VERSION     DATAVD010000946.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1834
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1392189"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1212
                     /locus_tag="VHX39_18145"
     CDS             <1..1212
                     /locus_tag="VHX39_18145"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3993097.1"
                     /translation="GRPDQFTDPPAQVSRAALFGGTTTLIDFVQCTHERSIQKAIEET
                     DASWKNAVYCDYGFHLTLMGQVPNGQFPELAEAMQQGHASIKIFTTDIRPGNQGRMVP
                     HGHIWEALKVVAANGGIAAIHAEDNDIVMFMYEKLMRENRVGIEFMAEVHNTLSEELS
                     FNRVIRLAENVEGAALYMVHVSAATGVAALAASRAKGFPMYGETLHQYLMYNAEDYKK
                     PNSQMYHTYPSLKYPEDQKRLWEATNHGAIQVIATDELCCPLRVKLQGSRIDDTTGGN
                     SGVEPRLSLMYTQMVTQRGYPLEQFVGMVSTNAAKIMGLYPRKGALAVGSDADIVVLD
                     TGLQKTIKAADLHETDYTPWEGHVVTAWPSVTVMRGAVVVDGGQFFGDLKQGQFLPRK
                     VADEIRSRPAV"
     gene            complement(1387..>1834)
                     /locus_tag="VHX39_18150"
     CDS             complement(1387..>1834)
                     /locus_tag="VHX39_18150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993098.1"
                     /translation="SVLQSPGYRAIGGENLSPWSKRVTAKVERLLRYEGEQINPGDKT
                     APANAGGLLLVGMTPSAETESAFNTWYDKEHLPALSRVPGVLCARRYRSNGAGTKYVA
                     LYHLTAPGVIDSAEWKDASGSTPMPQHVRDQISNRIRLVCRNYVRA"
BASE COUNT          380 a          533 c          562 g          359 t
ORIGIN      
        1 ggccggccgg atcagttcac cgatccgcct gcgcaggtca gtcgcgccgc gctgtttggc
       61 ggaaccacga cgctgatcga cttcgttcag tgcacgcatg agcgatcgat tcagaaagcg
      121 attgaggaaa ccgatgcgtc ctggaagaac gcggtctact gcgactacgg ctttcatttg
      181 accttgatgg gtcaggtgcc gaacggtcag tttcccgaac tggccgaggc aatgcagcaa
      241 ggccatgcca gcatcaagat tttcaccacc gacatcaggc ctggcaatca aggccgcatg
      301 gtaccgcacg gccatatctg ggaagccttg aaggtcgtcg ctgccaatgg cggcattgcc
      361 gcgatccacg ccgaagataa cgacatcgtg atgttcatgt atgagaaact gatgcgggaa
      421 aaccgtgtcg gcatcgaatt catggccgag gtccacaaca cgctgtccga ggaattgtcg
      481 ttcaatcgcg tcatccgcct cgccgagaac gtcgaaggag cggcgcttta tatggtgcac
      541 gtctcggctg cgaccggtgt tgcggcactg gcggcgtcgc gtgccaaagg gtttccgatg
      601 tacggcgaaa ccttgcatca atatttgatg tacaacgccg aggactacaa aaaaccgaac
      661 tcgcagatgt atcacaccta tccgtcgctg aaatatcccg aggatcagaa acgtctgtgg
      721 gaggccacca accatggcgc gatccaggtc atcgcgaccg acgaattgtg ctgccccttg
      781 cgggtgaagc tgcaaggcag tcggatcgat gacacgaccg gcgggaactc gggagtcgag
      841 ccaaggctgt cgctgatgta cacgcaaatg gtgacgcagc ggggttatcc gctggaacag
      901 ttcgtcggca tggtgtcgac caatgcggcg aagatcatgg gtctgtatcc gcgcaaaggc
      961 gcactggcgg ttggctcgga tgccgacatt gtggtgctgg acaccggttt gcaaaagacc
     1021 atcaaggccg cagatttgca cgaaaccgac tatacgccgt gggagggcca tgtcgtcacc
     1081 gcctggccga gcgtaactgt gatgcgtggc gcggtcgtgg tcgatggcgg tcagttcttc
     1141 ggcgatctga agcagggcca gtttctgcca cgtaaggtcg ctgacgaaat caggagccgt
     1201 ccggcggtgt agcgggtcgc aaaccggcga ccagcctgct cagtaggatg aggatgcgtc
     1261 gaagagcgcc cacatcgctt tcgtcattcc ccggctcgtc cggggaacct gccaccgcac
     1321 agtcatggac ccggttgccc ggacgagccg ggcaatgacg aatttgtgac ctgatcggaa
     1381 cgttcttcag gcccgcacgt agttgcggca gaccagacgg atgcgattgc tgatctgatc
     1441 gcgaacatgt tgcggcatcg gagtcgatcc gctggcgtcc ttccactcgg ccgagtcgat
     1501 gacgccaggt gccgtgagat gatacagcgc cacatatttc gtgccggcgc cgttgctgcg
     1561 gtaacgccgt gcacacagca cgcccggcac gcgggacagg gcagggaggt gttccttgtc
     1621 gtaccaggtg ttgaacgcgc tctcagtttc cgcgctcgga gtcataccga ccaagagcag
     1681 gccgccggcg ttggccggag cggtcttatc gcccggattg atctgctcgc cttcgtaacg
     1741 cagcaaacgt tccaccttcg ccgtcacccg tttcgaccac ggcgataaat tctcccctcc
     1801 aatcgcccgg tatcctgggc tttgcaatac cgaa
//
LOCUS       DATAVD010000947         7522 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_838526, whole genome shotgun sequence.
ACCESSION   DATAVD010000947 DATAVD010000000
VERSION     DATAVD010000947.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7522
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_838526"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..464
                     /locus_tag="VHX39_18155"
     CDS             <1..464
                     /locus_tag="VHX39_18155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993099.1"
                     /translation="FRLPHADADHFFWLPTDPPFTTRRPRSERLAMLTRELPTNGNWV
                     FSGSAISWATELEPAYDLIVFLYLDPAVRMQRLQRRETARYGERIQPGGDMAAASATF
                     FQWAAAYDIAGIAQRSLAAHEAWLGWQTARVLRLDSAWPVDTLVDAVARYA"
     gene            710..1801
                     /locus_tag="VHX39_18160"
     CDS             710..1801
                     /locus_tag="VHX39_18160"
                     /inference="COORDINATES: protein motif:HMM:NF025024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HEX3993100.1"
                     /translation="MTDSASQLRTFALKGHIQPGDPAPWWKQGRHKFVFDRAGGRYIV
                     LSFYGNAGDATGQTALRALHENRHFVDDGKASFFGICMDPRDKSERNVEHNFSAVQFV
                     WDFDAETHRAYGVAHRIWIVLDPMLRVVEVLPFSADGAEIPHLLTLLERLPPPSQYAG
                     DEAPVPVLLLPNVFEPAFCRYLIDRYEANGGRESGFMREVGGKAVESYDPEWKRRRDY
                     IITDPALIELIKARMGRRVGVMLQKAYRFTFSRMERHLIACYAEEDGGHFGPHRDDVV
                     RATEHRQFAVSINLNDDFDGGAVSFPEFSPRQFKAPIGTALIFAASVLHRVSKVTRGR
                     RYAFLPFLHDEAAEKLRLANLQFLTAPGN"
     gene            2539..3447
                     /locus_tag="VHX39_18165"
     CDS             2539..3447
                     /locus_tag="VHX39_18165"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3993101.1"
                     /translation="MTIITAVGTEASNLPNGSVMAMEFDPRLEPRVAAVAKIAAANAA
                     VVDRDSRFPAEAFAAAKAQGLLGIMVPRELGGEGASTADVVDVCYRLGGACASTGMIF
                     AMHQVKVACVVRHGRSSEWQNQLLRRLASEQLLFASSTTEGQGGGNIRSSAAAIEHTA
                     SGITLEREASVISYGAQADAVVTTARRSADAPGSDQVLAVFMKEDYTLETFLAWDTLG
                     MRGTCSSGFMLKASGCAEQVLPVPYDKIHAQTMVPCAHLMWASVWAGIATAALDSAQA
                     SIRSSARKAGGELPSGAAHFTKARAS"
     gene            3454..3777
                     /locus_tag="VHX39_18170"
     CDS             3454..3777
                     /locus_tag="VHX39_18170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993102.1"
                     /translation="MRGLIASALRRYEAIAHDEAAVASLEFQSSIALTKVEASEHAVA
                     IVLAALRATGLTGYRNDSQFSIGRYLRDILSSPLMISNDRILSNVGATALMSAVPAGL
                     REHQA"
     gene            3841..4770
                     /locus_tag="VHX39_18175"
     CDS             3841..4770
                     /locus_tag="VHX39_18175"
                     /EC_number="6.2.1.n2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014242276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid--[acyl-carrier-protein] ligase"
                     /protein_id="HEX3993103.1"
                     /translation="MDGVFPNPTEDAANRIQDPMGLVAASLLFPTGVDGIYGRSGMYE
                     DVINGLSGLISRNRDPGTEVLRFPPVMNRQVLEKSGYLKSFPNLLGCVCALHGTEAEI
                     RAAADGGDWTASLAAAEMVLTPAACYPVYPLVASRGPLPSGGVRIDVACDCFRREPSL
                     KLDRLQSFRMREYVCIGSPEEVAEFRERWLIKGRQMADQLGLDHTVELANDPFFGRAG
                     QMVGISQRQQALKFELQVPLYSAAEPTACMSFNYHRDHFGTVWGIRDSLRATAHTGCV
                     AFGMDRLAVAMFWKHGSDVQDWPKSIRNAMSLG"
     gene            complement(4819..5973)
                     /locus_tag="VHX39_18180"
     CDS             complement(4819..5973)
                     /locus_tag="VHX39_18180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993104.1"
                     /translation="MQWPRRRLLQTAAVLGSGGVCHAAVNGPLPFAVDPAKRDAWQAR
                     WQQHILTEAKARYCDTAMGEEIGWLISPLLNGFYYGFLLTGDTGWLDRLTNWTDAWIR
                     RGVTEPDGHIGWPKIGAAGTDVDNLNSFYADSLLGEAMVLRPVVLTSAVMLKDPALAA
                     HYGPKAHSYLELAHRTFEKWDQRGAWRTTDIGTISVVLPYGIDTKTGGWTDGERTKAD
                     LHVGFSHPDNKANQVGLWLLAMSDVTSIPLYRDRAKAWFQIMKSRLRLQPDGSYQVWN
                     YWEPAGPWDYRFFGVPKHWIGVHPNDGYYATDVQAMVAAYEHGLVFSSDDLGHLIKTA
                     QLDGRQWPAHAPYDATIRARFEQTLKPDGWAELSLVPWYLVEQRNGTVAR"
     gene            6193..7134
                     /locus_tag="VHX39_18185"
     CDS             6193..7134
                     /locus_tag="VHX39_18185"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3993105.1"
                     /translation="MPLDPNVQRFLRVLAATHPSDPSRLTASQRRDGFRDLMRFSEAP
                     PPIAGVEDRSLPGPEGPIRIRVYTPLALPAVRPPGLIWFHGGGLVAGSIETHDTLSRV
                     LADAIQCRLISVEYRLAPEHKFPAAVMDCLAATTWVIDNAATLDIAPDRIAVGGDSAG
                     GGLAAIVCQMVRQLHGRTISYQLLLCPILDYAGTTNSRVGFAEDRLVSKTMMDHDLEL
                     YLPSGTAPDGPLISPLRAQDVSSLPPAYIHTAEFDPMRDEGRAYADRLAASGVKASYT
                     CHPGMIHLFYAMTRVIPYALPAIQRLGGAIKATFGEI"
BASE COUNT         1393 a         2247 c         2356 g         1526 t
ORIGIN      
        1 atttccgcct gccacacgct gacgccgacc acttcttttg gttgccgacc gatccgccgt
       61 tcaccacacg ccggcctcgg agcgaacggc tggctatgct gacacgcgaa ttgcccacca
      121 acggcaattg ggtgttctcc ggctcggcga tcagctgggc gaccgaactg gagccggcct
      181 acgacctgat cgtgtttctg tacctcgacc ctgccgtccg catgcaacgg ctgcaacggc
      241 gcgaaaccgc tcgatatggc gaacgcatcc agccaggcgg cgacatggcg gcggcgagcg
      301 caacattctt tcaatgggcg gcggcctacg atatcgctgg tatcgcgcaa cgcagtcttg
      361 ctgcacatga ggcctggctg gggtggcaga ccgccagggt gttgcggctg gactccgcgt
      421 ggccagtcga cacgctggtc gacgcggtcg cgcgctacgc ctaaagtgag gaagagtcgg
      481 ggtttcaccc cggaccccga ccagtggctt ggtcccacag gccctaaagt aacgcttgac
      541 ctggcgcgaa ccggtacgat tctgggctca gatgcaacat tcagcatctc tgccaatgtg
      601 gaccaatgcc ctcgcgctcc caggccccac gaaccggccc agttgctttc ggtggagccc
      661 ggggaccgat tgctttaagc aggccagtgg aggtgcgact gatcgaccga tgactgattc
      721 tgcttcgcag cttcggacct ttgcgctgaa ggggcatatc cagcccggag accctgcgcc
      781 gtggtggaag cagggccggc acaagtttgt ctttgaccgg gctggcgggc gttacatcgt
      841 gctaagtttt tatggcaacg ccggcgacgc aactggccag acggcactgc gtgcgctgca
      901 cgaaaatcgc catttcgtcg atgatggcaa ggccagtttt ttcggcattt gcatggaccc
      961 gagagataag tccgaacgca atgtcgagca taacttttct gcggtgcaat tcgtctggga
     1021 cttcgatgcc gagacgcacc gcgcctatgg tgtcgcgcac cgcatatgga tcgttctgga
     1081 tcccatgctg cgcgttgtcg aagtgttgcc gttcagcgcg gacggagcgg aaatcccgca
     1141 tttgctgacg ttgctcgagc ggctaccgcc gccgtcgcag tatgctggag atgaggcccc
     1201 ggtcccggtg ctgctgttac ccaatgtatt cgagccggcg ttctgccggt acctgatcga
     1261 tcgctacgaa gcgaacggcg gacgcgagag cggcttcatg cgggaggttg gcggcaaggc
     1321 ggtcgagtcc tacgaccccg aatggaagcg acggcgggac tacatcatca ccgatccagc
     1381 actgatcgaa ctgatcaagg ccaggatggg gcgccgtgtc ggcgtgatgt tgcagaaagc
     1441 ctatcgtttc accttctcgc gcatggagcg gcatttgatc gcatgctatg cggaggaaga
     1501 tggtgggcat ttcggtccgc atcgagacga cgtcgttcgt gcgaccgagc atcgccagtt
     1561 cgccgtctcg atcaacctga acgatgattt cgatggcgga gcggtgagct tcccggagtt
     1621 cagcccgcgc cagttcaagg cacccatcgg tacggcgttg attttcgccg cttcggtgct
     1681 gcatcgcgtc agcaaggtaa cgcgtggccg ccgctacgcg tttctgccgt ttttgcatga
     1741 cgaggcggcg gagaaattgc gccttgccaa cctgcagttt ctgaccgcac cgggtaactg
     1801 acgatgaggc gaaaaggagc gccgggcctg ttcagggtct gcgttctgcc gatccgtcag
     1861 atggcaagct gcgggcgtcg atggattgta acacccaggc aggaaccacc tccaatcaac
     1921 acccgcgtgc gtcgtgctgc tgggatccgt caggcggctt ttggaccgat ccgccgttga
     1981 caggcaccga ggttgcgggt tccgctgcgt cgaaacctcg cgccggtgcc gaggcgtcgg
     2041 gaccgcccga gtgcggctgt ggatctcgat cacctcagca accgatgggt gaactatgcg
     2101 cacggcattc catggcattt gtgtcatatg tctttctaat aagacgtcga tatttgattg
     2161 acatggacag cccctccggt tcactattcc gcaccaatta tgcacgcatg cgcccaatcg
     2221 cccgttgaat tctctctaat tcgcatgttg taggttgaaa atctgcctta aaaataaggt
     2281 gatgcgctaa tttatggggc ggcgacgcgg agcggcgagg tggaatgtgt taccggtacg
     2341 attacttttg gccgctacac acaaaccact ggaccggtcg aggtcaccag tttctcgagg
     2401 gcctatgaca acgggtttca ttgaggcggg cgaatgccaa aggggcgttg gcctctcaat
     2461 tggcgcgggc gacacgggag tgcctggaat gtgcgcatcc ggcacagtgt gagcggcttt
     2521 caatgtacgg gggatataat gacgatcatc actgcggtcg gcactgaggc gtccaatctg
     2581 cctaacggtt cggtaatggc aatggaattc gatccgaggc tcgaaccccg agtggcggcg
     2641 gttgccaaaa tcgccgcagc caatgccgct gtagtcgatc gcgactcgcg gtttcccgcc
     2701 gaagcgttcg cagcggccaa agcccagggt cttttgggta ttatggtgcc acgtgagctt
     2761 ggcggcgaag gggcgagcac ggcggatgtc gtcgatgtct gctaccggct gggcggcgcc
     2821 tgcgcctcca ccgggatgat tttcgcgatg catcaggtca aggtcgcctg cgtggtccgg
     2881 catggccgca gcagcgaatg gcagaaccag ctgttgcgcc ggcttgccag tgagcaactg
     2941 ctttttgcct cttcgaccac cgagggtcag ggcggcggca acattcgctc cagcgctgcg
     3001 gcgatcgagc acactgcgtc cggaatcacg ttggaacgtg aggccagcgt catatcatac
     3061 ggcgcgcagg cggacgcggt ggtgacgacg gcgcggcgat cggcagatgc gccggggtcc
     3121 gatcaggtcc tcgcggtgtt tatgaaggaa gactacacgc tcgaaacgtt tctggcatgg
     3181 gatacgcttg gcatgcgggg cacctgcagc tcgggcttca tgctcaaggc gtcgggctgt
     3241 gccgagcagg tgctgcctgt gccgtacgac aaaatccatg cgcagacgat ggttccgtgc
     3301 gcgcacttga tgtgggccag cgtctgggct gggattgcca cggccgcgct cgatagcgct
     3361 caggcgagta ttcgcagtag tgcgcgcaag gcgggtggcg aactgccgtc cggtgcagcc
     3421 cattttacca aggcacgcgc ctcatgaacc acgttgcgtg gcctgatcgc gtcggcgctg
     3481 cgccgctacg aggcgatcgc gcacgatgag gcggccgtcg cgtcgctgga atttcagtcc
     3541 agtatcgctc tcacgaaggt cgaagcatcc gagcacgctg tcgcgatcgt tctggctgcg
     3601 ttgcgagcga ccgggctgac cggttaccgc aacgatagcc agttcagcat tggccgctac
     3661 ctgcgtgaca ttttgtcgtc gccgctgatg atcagcaatg accgcattct gtcgaacgtc
     3721 ggcgcgaccg cattgatgag tgcggtacct gcgggtttgc gcgaacatca ggcatgatga
     3781 tcgaactctc gtctgcaaca tctcagcgca atcacagtaa atagcgaaag gcctgccgaa
     3841 atggatggag ttttcccgaa cccgaccgaa gatgctgcca accgcatcca ggatccgatg
     3901 ggtttggtcg cggcgtcgtt gctgtttcca accggtgtcg acggcatcta cggtcgcagc
     3961 ggcatgtacg aggacgtgat caacggacta tccgggctga tctcgcgcaa ccgcgatccc
     4021 ggcaccgagg tattgcggtt tcccccggtc atgaatcgtc aggtcctgga gaagtcgggc
     4081 tatttgaaaa gctttcccaa tttgctcggc tgtgtctgcg cattgcacgg aacggaagcg
     4141 gaaatccggg ccgctgctga tgggggcgat tggaccgcct cgttggcggc cgctgagatg
     4201 gtgttgactc cggctgcctg ctatccggtt tacccgctgg tggcgagccg tggtccgttg
     4261 ccgtccggcg gcgtgcgaat tgatgttgcc tgcgactgtt ttcgacggga accgtcgctg
     4321 aaactggacc ggttgcagtc attccggatg cgagaatatg tctgtatcgg ttcgccagag
     4381 gaagttgccg agttccgcga acggtggctc atcaaaggac gccagatggc ggaccagctt
     4441 ggcctggatc ataccgtcga actggccaac gatccgttct tcggccgcgc tgggcagatg
     4501 gtcggaatta gccagcgtca gcaagctctg aagttcgaac tgcaggtgcc gctatactcg
     4561 gcagccgagc cgaccgcgtg catgagtttc aattaccatc gcgatcattt cggcaccgtt
     4621 tggggcatcc gcgacagcct gagggcgacc gcccataccg ggtgcgtggc attcggcatg
     4681 gaccggctcg ctgttgcaat gttctggaag catggttccg acgttcagga ctggccgaag
     4741 tcgatacgca acgccatgag tctgggctaa gagcaagagg cctgtcgatc tgccaggcct
     4801 cggcacgacg cccgcgagct accgggctac ggtaccgtta cgctgctcca caaggtacca
     4861 aggcaccagc gaaagttcgg cccagccatc gggtttcaac gtttgctcga acctggccct
     4921 gatcgtcgcg tcataaggcg catgggcggg ccactgacgg ccatcgagct gcgccgtttt
     4981 aatgagatgg ccaagatcgt cggagctgaa caccagacca tgctcgtagg ctgcgaccat
     5041 cgcctgcaca tcggtcgcat agtagccgtc gttaggatgc acgccgatcc agtgttttgg
     5101 aacgccgaag aagcgatagt cccaggggcc tgcgggttcc cagtagttcc aaacctgata
     5161 actgccatcc ggctgcaacc gcaaccggct cttcatgatc tgaaaccagg ccttggcgcg
     5221 atcccgatag agcgggatgg aggtcacatc ggacatcgcc agtagccaca acccgacctg
     5281 gttggccttg ttgtccggat gcgagaagcc gacgtgcaga tcagcctttg tccgctcgcc
     5341 atcggtccat cctccggtct ttgtgtcgat gccgtacggc agcacgacac tgatcgttcc
     5401 gatgtcggtg gtgcgccagg caccgcgctg gtcccatttc tcgaacgttc ggtgcgcgag
     5461 ttcgaggtac gagtgggcct tcggaccata gtgagcggcg agtgccgggt ctttcagcat
     5521 gacggcagac gtcagcacga caggccgtag gaccatcgct tcgccgagca ggctgtcggc
     5581 atagaaactg ttgagattgt cgacgtccgt cccggctgcg ccgatcttgg gccacccgat
     5641 atggccatcg ggttcggtca cgccacgcct gatccaggcg tccgtccagt tggtcaggcg
     5701 atccagccaa cccgtatcgc cagtcagcag aaagccataa taaaagccgt tcagcaatgg
     5761 ggagatcagc cagccgattt cctcgcccat ggcggtgtcg cagtagcgag ccttcgcctc
     5821 ggtcaaaatg tgctgctgcc aacgcgcctg ccaggcgtcg cgtttagcgg gatcgacggc
     5881 gaacggtagc ggaccgttga cggcagcatg gcatacgcca ccggatccca gcacggcggc
     5941 cgtctgcaac agccggcgcc gtggccactg catcgcgcgc tgatccatta tacggcgaat
     6001 tccacagtaa acctcgcagg ctaccgaagc gcgcaatggt cgcacggcgc cggcagcagc
     6061 gccaggctcg gggccggggt gaaaccaggg tgcaaccttg ccgcgcttga ccctgtcatg
     6121 tccgccatga catgacctcg cccggcctgc gagacgacgc cagcctggcc gccatcgcag
     6181 gaacccgccg tcatgccgct tgatccgaat gtgcagcgtt ttctccgcgt tctcgccgcg
     6241 acccacccgt cggacccgtc gcgtctgacc gcctcgcagc gccgcgatgg gtttcgcgac
     6301 ctgatgcggt tttctgaggc tcccccaccg attgccgggg tggaggatcg ttcgctgcct
     6361 ggcccggaag gtccgatccg aattcgggtc tatacaccgc tcgccctgcc tgccgttcgt
     6421 cctccgggtt tgatctggtt ccatggcgga ggcctggttg ccggaagcat cgaaacgcac
     6481 gacacgctca gccgggtttt agccgatgcg atccagtgcc gtctgatttc ggtggaatac
     6541 cgattggccc ccgagcacaa atttcccgcc gcagtcatgg actgccttgc tgccacgacg
     6601 tgggtcatcg ataacgccgc tacactggat atcgcacccg accgcatcgc agtgggcggt
     6661 gactcggctg gcggaggtct ggccgcgatc gtttgtcaga tggttcgcca attgcacggc
     6721 cggactattt cgtatcagtt actgctgtgc cccatcctgg attacgcggg cacgacgaat
     6781 tcacgcgttg ggttcgctga ggaccgtctc gtgagcaaga cgatgatgga ccacgatctg
     6841 gaactctatt taccctccgg gaccgcgccg gatgggccgc tgatatctcc gctccgcgcc
     6901 caggatgtga gttcgctgcc gccggcatac atccacactg ccgagttcga tccgatgcga
     6961 gatgaagggc gcgcttatgc ggaccggctt gcagcatccg gcgtgaaagc gagttacacc
     7021 tgccaccccg gcatgattca tctgttctac gcaatgaccc gcgtgattcc ttacgccttg
     7081 cctgccatcc agcgattggg cggggcgatc aaggcaacct tcggcgagat ctgagcacgg
     7141 tttcttctga gagtacgggg cgcagatatt ctggcatcct gtcggatcgc tgtcgcggcg
     7201 gcctggcagc atggagatcg ccaacgtacc ggtgaagggt aactcgctcc gctgtaaagc
     7261 ggcgttactg cagcaacgaa cggaaccttt gggatgaccg gcgagactgg atctaaatgc
     7321 ttttcgatca ggcgcgcccg gctgcgtttt tgcccgactt gagccggatt aatctggttg
     7381 gaaagcgttc tggcgcaagt gcgtcagtga aaatgcacaa ccgttgctcg ctggcgcgat
     7441 gaacccgtcg ccgccccgga tgttgaaagt ggccgcatat cgcgcaacgc aaccgacgct
     7501 ggatgaaaca gtcccagcag gc
//
LOCUS       DATAVD010000948         2506 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1765564, whole genome shotgun sequence.
ACCESSION   DATAVD010000948 DATAVD010000000
VERSION     DATAVD010000948.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1765564"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..996)
                     /locus_tag="VHX39_18190"
     CDS             complement(<1..996)
                     /locus_tag="VHX39_18190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010510152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotA"
                     /protein_id="HEX3993106.1"
                     /translation="MTKPTTYLIRMAVFLLLVAIVVGVLSPVLWGIFQHNPGLNALIL
                     LVLAVGIAWNLRQVLRLSPEVDWLEHYQAGADQIARPPETRLLAPMARMLRPDDRLAQ
                     RQLTLSAGATRSLLDSLASRLDESRELSRYMTGLLIFLGLLGTFWGLLKTIGAVADVI
                     SAMSVGTGDVAAMFDRLKAGLGLPLQGMGTAFSASLFGLAGALILGFLDLTAGQAQNR
                     FFNELEEWLAGLTRLSSGALADGEGSVPVYVQALLEQTAENMESLRRVLLRGEDGRTQ
                     AQQALIALNGQIGALTDAVRTSQQLMQRMAETQASGDDVAVIHLRNIDLCLQRMAA"
     gene            complement(993..1703)
                     /locus_tag="VHX39_18195"
     CDS             complement(993..1703)
                     /locus_tag="VHX39_18195"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX3993107.1"
                     /translation="MKPLRLLLTVCLRATAVPASLLPCLISGAQGQVSVDMHALDGPG
                     TTRPAPTRHPPQASVVPTHRTTAATSSSRADHPSPASRLAQDRPTPQQTPTPTPAAVP
                     ALPTQQPAPPPPSTLVPNPATNPLALPPPVRLVFEAGKTDLTPEDEAAIQDLARAIPA
                     PTADSVSVLAYAAGKPDDPSTARRLSLSRGLAVRSVLLASGVPSAQIYVRALGSTPSN
                     GPADRVELTVGPIGTVTR"
     gene            complement(1745..>2506)
                     /locus_tag="VHX39_18200"
     CDS             complement(1745..>2506)
                     /locus_tag="VHX39_18200"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008852209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEX3993108.1"
                     /translation="LLRDFAEVEQLQVSIKGPSDFVSQADIRAEQTLKEELNKARPGY
                     AFLMEESGASGSDNWSWRWVVDPLDGTTNFLHGIPHWAISIGLERRLADGTSELAAGL
                     IYAPAVDEMFWAEKGGGAFVNERRMRVSARRDLTEAVFATGIPFRAVSAVRRNAFSRT
                     MIALMPQVAGIRRFGAAALDLAWVAAGRYDGYWELGIQNWDMAAGLLMVREAGGYATS
                     TGDEDPRDSGNVVAGNPHLHAKLRESVIQGMNPHT"
BASE COUNT          429 a          820 c          856 g          401 t
ORIGIN      
        1 cgccgccatg cgttgcagac aaaggtcaat gttgcgcaga tggattactg ccacgtcatc
       61 gccgctcgcc tgggtttccg ccatccgctg catgagttgc tggctggtgc gcaccgcgtc
      121 ggtcagcgct ccgatctggc cgtttaatgc aatgagtgcc tgttgcgcct gggtgcggcc
      181 gtcctcaccg cgcagcagga cgcgacgcag gctttccata ttctcggcgg tctgttccag
      241 cagtgcctgc acatagaccg gcaccgaccc ctcgccgtcc gccagagcgc cggaggacag
      301 ccgggtcagg ccggcgagcc actcctcgag ttcgttgaag aaacgatttt gcgcctggcc
      361 ggcggtcagg tcgagaaatc ccaggatcaa agcaccggcg aggccgaaca ggctggcgga
      421 gaacgccgtg cccatccctt gcaacggcag gccgaggccc gctttcagcc gatcgaacat
      481 ggcggcgaca tcgccggtcc cgaccgacat ggcactgatc acatcggcca ccgcgccgat
      541 ggtcttcagc aacccccaga aggtgcccaa aaggccaaga aagatgagca gtccggtcat
      601 gtagcgcgac agctcgcggc tttcgtccag acgggatgcc aaactgtcga gcaggctgcg
      661 cgtcgccccg gccgacaggg tcagctgccg ttgcgccagc cggtcatcgg gccgcagcat
      721 gcgcgccatc ggggccagca gacgagtctc cggcgggcgg gcaatctggt cggcgccagc
      781 ctggtagtgt tccagccagt ccacctccgg cgacaggcgc agaacctgac gcaggttcca
      841 ggcaatccca accgccagca ccagcaggat cagcgcgttg aggcccggat tatgctggaa
      901 tatcccccaa agcaccggcg acaatacgcc gacaacaatg gcgaccagca gcagaaacac
      961 cgccatacga atcagatagg ttgtcggctt ggtcatcttg tcaccgtgcc gattggcccc
     1021 accgtcagct cgacccggtc cgccgggccg ttcgacggcg tcgaacccag ggcccgcacg
     1081 tagatctgtg ccgacgggac cccgctggcc agcagcaccg agcgcaccgc cagcccgcgt
     1141 gataacgaca gccgccgtgc cgtcgacggg tcgtccggct taccggcagc gtaggcgaga
     1201 acactgacac tatcagccgt cggtgccggg atcgctcgcg cgaggtcctg gatcgccgct
     1261 tcatcttccg gggtgaggtc tgtcttgccc gcctcgaaca ccaaccgcac tggtggcggc
     1321 agagctaacg ggttggttgc tgggttggga acgagggtgg aggggggcgg cggggctggc
     1381 tgctgagttg gcagtgccgg aacggccgcc ggcgttggcg ttggcgtttg ctgcggggtc
     1441 ggacgatcct gcgcgagacg actggcgggc gaggggtggt ccgcgcgcga gctactggtt
     1501 gcagccgtgg tacgatgggt gggcacgacg gacgcctgcg gcggatggcg ggtgggcgcc
     1561 ggccgcgtcg tcccggggcc atccagcgca tgcatgtcga ccgatacctg accctgggcg
     1621 cccgaaatca ggcacggcaa cagggaagcc ggaacagcgg ttgctcgcag gcaaaccgtc
     1681 aacaggaggc gcaggggctt cattggctcg ccaaggcagt ggatcgaccc ggggcgtctg
     1741 gttctcacgt gtgaggattc atgccctgaa ttacggattc tcgcaacttc gcatgcaaat
     1801 gcgggttgcc ggcgacgaca ttgccgctgt cgcgcgggtc ctcgtcgccg gtgctggtgg
     1861 cgtagccgcc ggcctcgcgc accatcagca ggcccgcggc catgtcccag ttctgaatgc
     1921 ccagttccca gtagccgtcg tagcggccgg ctgccaccca ggcgaggtcg agggcagcgg
     1981 cgccaaagcg gcggatgccg gcgacctgtg gcatcagggc gatcatggtc cggctgaagg
     2041 cgtttctccg cacggcggac acggcgcgga acggaatgcc ggtggcgaac accgcctcgg
     2101 tcaggtcccg ccgagccgag acccgcatcc ggcgctcgtt gacgaaggca ccgccgcctt
     2161 tttcagccca gaacatctcg tcgacggcgg gggcgtagat caggccggcg gcgagctcgg
     2221 acgtgccgtc ggccagccgc cgctccaggc cgatgctgat cgcccaatgc gggatgccat
     2281 ggaggaagtt ggtggtgccg tcgagcgggt cgacaaccca gcgccagctc cagttgtcgg
     2341 agccggaggc accggattcc tccatcagga aggcatagcc gggccgggcc ttgttgagtt
     2401 cttccttcag cgtctgttcg gcacggatgt cggcctggct cacgaagtcg gacgggcctt
     2461 tgatgctgac ctgcaactgc tcgacctcgg cgaagtcgcg cagcag
//
LOCUS       DATAVD010000949         3879 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1209831, whole genome shotgun sequence.
ACCESSION   DATAVD010000949 DATAVD010000000
VERSION     DATAVD010000949.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3879
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1209831"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1022)
                     /locus_tag="VHX39_18205"
     CDS             complement(<1..1022)
                     /locus_tag="VHX39_18205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEX3993109.1"
                     /translation="MADDVVPSDATTYSQDRGEALGSQDRGEAPGLNFPRFLEALQLV
                     RAGDFSVRLPSTEGGLAGRMAETFNDIVAANQRMAQQLEHVGEVVGRGGMTRTRVRFS
                     LSNGAWGDMEQSVNTLLDDLVWPTTQVTSTISAVARGDLLQTMPLDMDGRPLKGEFLR
                     SANIVNAMIKQLSVFTSEVTRVAREVGTDGKLGGQAQVSEVTGVWRELTESVNSMASN
                     LTAQVRNIAEVTIAVADGDLSKKITVDVRGEILQLKEAINTMVDQLRSFASEVTRVAR
                     EVGTEGELGGQAIVPGVAGTWKDLTDSVNAMCGNLTAQVRNIAEVTTAVARGDLSRKI
                     TVDVKG"
     gene            1888..2205
                     /locus_tag="VHX39_18210"
     CDS             1888..2205
                     /locus_tag="VHX39_18210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993110.1"
                     /translation="MTDETSCNPHKEEDEGYLAAESGLNLAKNPYPKGTIRHEEWRKG
                     WQIKKDETRRDKGEGYLAAESGQSLAQNPYPRGTIRFAEWRSGWQLRNDETQRAIRLG
                     RDT"
     gene            2347..3174
                     /locus_tag="VHX39_18215"
     CDS             2347..3174
                     /locus_tag="VHX39_18215"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEX3993111.1"
                     /translation="MDLNTITELSRPQNRDDFQPWRQGDAWLAGGTWLFSEPQPDLRR
                     LIDLAGLGWPALEIGLEGLRIGATCTLAQLASADLPAAWRVAPLFRQSCRALLGSFKI
                     WNAATVGGNLCMALPAGPMAALTTALDGICVIWAADGTERTLPASEFVLAPQQNALQP
                     GELLRAVHLPAEAVQRRTALRKISLTQLGRSAALLIGTLAPSGAFAVTVTAATRRPIR
                     VDFHSIPTEAELRQTLVAGIPDTMYYDDLHGAPEWRRHMTFRFAEQIRRELSGIDPA"
     gene            3171..>3879
                     /locus_tag="VHX39_18220"
     CDS             3171..>3879
                     /locus_tag="VHX39_18220"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX3993112.1"
                     /translation="MTVRINGIERSEEPRIGQCLRTFLRELGWYGVKKGCDAGDCGAC
                     TVLLDGMPVHSCVTPAFRAEGREVTTIEGLAGDERHAMQQKFVAAQGFQCGFCTAGMV
                     VTAAGLDQAQQQDLAHAMKGNLCRCTGYRAIEDAIRGIVYVEPEDGPGWYLGRATPAP
                     AGPGVVSGTVRYTMDFDPPVGLLHLKLLRSPYAHARIVAIDTTAALAVPGVHAVLTPD
                     DSPGKRFSTARHENPLDD"
BASE COUNT          723 a         1219 c         1251 g          686 t
ORIGIN      
        1 tcgcccttca cgtcgaccgt gatctttcga gacagatcac cccgagcgac ggccgtggtg
       61 acttcagcga tgttgcgcac ctgtgcggtc aggttgccgc acatggcatt caccgagtcg
      121 gtcaggtctt tccaggtgcc ggcgacgccc ggcacgatcg cctgaccgcc gagttcgcct
      181 tcggtgccaa cctcgcgggc gacgcgggtg acttcagagg cgaacgaccg caactgatcc
      241 accatcgtgt tgatggcttc cttgagttgg agaatctcgc cgcgcacgtc gacggtgatc
      301 ttcttcgaca gatcgccgtc ggccacggca atcgtcacct cggcgatgtt gcgcacctgg
      361 gcggtcaggt tggaagccat cgaattgacc gattcggtca gctcgcgcca cacgccggtc
      421 acttcgctga cctgagcctg gccgccaagc ttgccgtccg tgccgacctc tcgtgcgacg
      481 cgcgtcacct cggaggtgaa gacagacaac tgcttgatca tggcgttgac gatgttggcg
      541 gagcgcagga actcgccttt cagcgggcgg ccatccatgt ccagcggcat ggtctgcagc
      601 agatcgccgc gggcaacggc ggagatcgtg ctggtcacct gggttgtcgg ccacaccaga
      661 tcgtcgagca gcgtattgac cgattgctcc atgtcgcccc aggcgccatt cgagaggctg
      721 aaccgcaccc tggtccgggt catgccgccc cggccgacca cctcccccac atgctccaac
      781 tgctgggcca tccgctgatt ggcggcgacg atgtcgttga acgtctcggc catccggccg
      841 gccaggccgc cttcggtact gggcagccgc accgagaagt cgccggcgcg caccaactgc
      901 aacgcctcca ggaaccgtgg gaagttgagg ccgggggcct cgccccgatc ctgagagccg
      961 agggcttcgc cccgatcctg ggaatacgtg gtggcgtcgg acggcacgac gtcgtcggcc
     1021 aacccgattt ggacatcatc aggagtcatg gctcaccagc aatgtatgtg atgggagaat
     1081 ggagcgacgg ggagcagcac tcgtccggcg cggcgcggtg gtcccgacgg caatgccggc
     1141 aggccagata gcgaacggtt ccgtaacctg cgccaatggt ttaacccccc aatccgatgg
     1201 gtcagctttt cgctgctttt tcatgtcagc ggcacttcag caatgccaac ggcgtgtact
     1261 gctggcacac gtcgccgtta atgcaaacgc aacccgggcg atttggttcc ctttgtgcct
     1321 ggccaaaatc gacgccatcg cgctttactt gcgcgcgggt gggaccggcc agccggtatt
     1381 accgccggcg tcggcgggtc acagccggat caggggtgaa tccaaatgac gatctcgcag
     1441 cttcgcgctg aagtccgtgc acccgaagtg acgcgtcacc ttaaggaatt cacccgccgc
     1501 accaggctgt caggcacgcc ggaggaacct gagagacgag tcctggcagc gaacgtcaaa
     1561 gagcatcttc gtaggtaacg atacacatag atgcttatcg cctggccccc agagtgtcat
     1621 cggctggccg attcgacatc actgcgtcgt gacggtgaag cgaccccgcc gccgcaacgt
     1681 tcgcaaccgg caccatgcgc gttgacccgc gcggattgcc ggttttgacc gtgccgttgt
     1741 tcggccgaaa ccggagactt gcggtcgccc tgacaaggac cggctcgacc gacaccaggc
     1801 aacttcccgg gcactgcatc gcggaattgc cgaccgtgcc aaatggcgcg aaagtgccgg
     1861 ccaggcggag gaacgaaagg gccgggtatg actgacgaga cgtcttgcaa ccctcacaag
     1921 gaggaagatg aaggctatct ggctgcggaa tccgggttga atcttgccaa gaacccttat
     1981 ccaaagggca ccatccgcca cgaagagtgg cgcaagggct ggcagatcaa gaaggacgaa
     2041 acccggcgcg acaagggcga ggggtacttg gccgccgaat ctgggcagag cctggcgcag
     2101 aatccgtacc cgcgcggcac cattcggttc gcggaatggc ggagcggttg gcaactcagg
     2161 aatgacgaaa cccagcgtgc gataagattg ggccgcgaca cctgacagga tcgcagctgt
     2221 cactgtgtga tcgtatcgtc ttcatggcgg gcgcgaagac gggctgaaac cgccgagctt
     2281 cctttgggcc gcacctggca cggccgttgc ttgacacaaa agcggcggag ccgacggatg
     2341 ctggccatgg acctcaacac cattaccgaa ctgagccggc cgcaaaaccg ggatgatttc
     2401 cagccctggc gtcagggcga cgcgtggctg gcgggcggca cctggctgtt ctccgagcca
     2461 caaccggatt tgcgccggct gatcgacctc gccgggcttg gctggccggc attggagatc
     2521 ggcctcgagg ggctgcggat cggcgccacg tgcacactgg cgcagctggc ctctgcggat
     2581 ttgccggcag cctggcgtgt cgcaccgctg ttccggcaat cgtgccgcgc gctgctggga
     2641 tcgttcaaaa tctggaacgc ggccaccgtt ggcggcaacc tttgtatggc gctgcccgcc
     2701 ggaccgatgg cggcattgac caccgcactc gacggaattt gcgtgatctg ggctgcggac
     2761 ggcaccgagc gaacactgcc cgccagcgag ttcgtcctcg caccgcaaca gaatgcattg
     2821 cagccgggag aactgttgcg cgctgtccac ctgccggcgg aagccgtgca gcgtcgcaca
     2881 gcattgcgaa aaatttcgct gacgcagctt ggacggtctg ctgcattgct gatcggcacg
     2941 ctggcaccgt ccggagcctt cgccgtgacc gtcaccgccg ccacacgccg gccgatccga
     3001 gtggacttcc attccatacc gaccgaggcg gaacttcggc aaacgctcgt cgccggaatt
     3061 cccgacacga tgtattacga tgacctgcat ggcgcacccg aatggcgccg ccacatgacc
     3121 tttcgcttcg ccgagcaaat ccggcgcgaa ttgtcgggca tcgatccggc atgaccgtcc
     3181 ggatcaatgg catcgagcgc agcgaagagc cacggattgg gcaatgcctg cgcacattcc
     3241 tgcgggagct tggctggtac ggcgttaaaa aaggctgcga tgccggagat tgcggtgcgt
     3301 gcaccgtctt gcttgacggc atgccggtgc acagctgcgt cacccccgcg ttccgcgccg
     3361 aagggcgaga ggtcaccacg atcgaggggc tggcgggtga tgaacggcac gcgatgcagc
     3421 aaaagttcgt tgcagcccag ggatttcagt gcggattttg tacggcggga atggtggtga
     3481 cagcggccgg tctggatcag gcgcagcaac aggacctggc ccacgcgatg aagggcaacc
     3541 tctgccgctg caccggctat cgcgccatcg aagatgccat ccgcggcatc gtgtatgtcg
     3601 aaccggagga tggaccgggc tggtatctgg gtcgcgctac gccggctccg gcaggtccgg
     3661 gcgtggtgag cggaacggtg cgctatacga tggattttga cccgccggtg ggactgttgc
     3721 atttgaagtt gctgcgttcg ccgtatgccc atgccaggat cgttgcaatc gataccacgg
     3781 cggcgttggc ggtgccgggt gtgcacgcgg tgctgactcc agacgattcg ccgggcaaac
     3841 ggttttccac ggcacggcac gaaaatccgc tggacgacc
//
LOCUS       DATAVD010000950         1769 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_278840, whole genome shotgun sequence.
ACCESSION   DATAVD010000950 DATAVD010000000
VERSION     DATAVD010000950.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_278840"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..818)
                     /locus_tag="VHX39_18225"
     CDS             complement(<1..818)
                     /locus_tag="VHX39_18225"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA family NAD(P)-binding protein"
                     /protein_id="HEX3993113.1"
                     /translation="MFLVMGITGKVGGATAEHLLAHGKEVRALVHTREKASSWANRGV
                     ELVDGDWNDSAAIEQALKGVEGAFVMLPSVWTPSPDYKEARGVIANYIEALTKAAPPR
                     VVALSSMGANRTSELGMITALSLLEQGFRNLTSPIAFVRAGGFFENFLYGLQVAQGGT
                     LPVYYNPTNRKSTMVATNDIGAEVATLLTGPAWSGQRIIELGSMVTADEVAEQLGEVL
                     NRDVKAFAVPRAGWAEAFEQFGIPKGQTGPAEEMFEAVNAGSMDLGVKGTQHVAG"
     gene            complement(864..1286)
                     /locus_tag="VHX39_18230"
     CDS             complement(864..1286)
                     /locus_tag="VHX39_18230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008892344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX3993114.1"
                     /translation="MSETINLHQVPETMTMHRALWAGRIMSAFVVIALVADGAIQLFA
                     PAQIASMLQETGFAMDLTRVVGPIILACAILYAIPATAVFGAILVTGFLGGAICAHVR
                     IGELGSPPEIVSLLLGTMTWGGLYARDPRIWAILPLIR"
     gene            1405..>1769
                     /locus_tag="VHX39_18235"
     CDS             1405..>1769
                     /locus_tag="VHX39_18235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008892342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3993115.1"
                     /translation="MQNLEPILIFITVAEMGSFTRAADSLGIQKGRASTAVRKLEEDV
                     GVRLLHRTTRSVQLTEDGRAFHARARDLLAEVDDLHSMFADDRVALRGRLRVDLPTEV
                     ARTTIVPALPDFMAAHPEL"
BASE COUNT          355 a          544 c          511 g          359 t
ORIGIN      
        1 cccgctacgt gctgcgtacc cttgacgccg aggtccatcg atcccgcatt cacggcctca
       61 aacatttctt cggcaggtcc agtttggccc ttcgggatgc cgaactgctc gaacgcttcc
      121 gcccaccctg cacgcggaac tgcaaaggct ttcacgtcgc gattcaggac ttcacccaat
      181 tgctccgcga cttcgtccgc ggtgaccatc gaaccaagct cgatgatgcg ctgccccgac
      241 caagctggcc cggtcaaaag ggttgcgacc tccgcgccga tgtcgtttgt cgcgaccatg
      301 gtcgatttcc ggtttgtggg attgtagtag accggtagcg ttccgccctg ggcgacctgc
      361 aagccgtaga gaaagttttc gaaaaatcca cctgctcgca caaatgcgat tggggatgtc
      421 aagttgcgaa agccttgctc cagaagcgac aaggccgtga tcatccccag ctcgctggtt
      481 ctgttcgcac ccatcgacga gagcgcgacc actcgcggcg gcgccgcctt ggtcagcgcc
      541 tcgatatagt tcgcaatcac gcccctggct tctttgtaat cgggcgatgg ggtccagaca
      601 gaaggcagca tgacaaacgc gccttcgacg cctttgagcg cctgctcgat ggccgccgaa
      661 tcattccaat caccgtcgac cagttccacg ccccggttcg cccagcttga cgctttctcg
      721 cgagtgtgga ccagcgcgcg tacttccttg ccgtgcgcca gcagatgttc tgccgtcgcg
      781 ccgcccactt ttcccgtgat tcccattact aaaaacatat gttttctcct gatcttgagg
      841 gacagagcac tgcccctgtt ggttcaacgg ataagcggca gaatcgccca gatacgggga
      901 tcgcgcgcat agaggccgcc ccatgtcatc gtgcccagaa gcagggaaac gatttccggc
      961 ggcgacccca actcgccgat gcggacatga gcgcagatgg cacctcccaa aaagcccgtc
     1021 accaggatcg cgccgaagac ggcggtggcc gggattgcgt aaaggatggc gcaggcgagt
     1081 atgatcggac ccacgacgcg ggtcaggtcc atcgcgaacc cggtttcctg caacatgctc
     1141 gcgatctgtg ccggcgcgaa aagctggatg gcgccgtctg ccacgagagc gataacgaca
     1201 aacgcgctca ttatccggcc ggcccacagg gcgcgatgca tggtcatggt ctccggtacc
     1261 tgatgtagat ttatggtttc ggacacttgt gcttctccaa tggggtcatc caatttcggg
     1321 gcttactgtg tctctgagat atgataaaca ccgataaagt gaacgcactg ttctctctgc
     1381 ggtgaacaat gccgaggcac gaaaatgcag aatctcgaac ccatcctcat attcattacg
     1441 gtagcggaaa tgggaagctt cacccgcgcg gccgatagcc tgggcatcca aaaggggagg
     1501 gcctcaacgg cggtccggaa gctggaagaa gatgtcggtg tcaggctcct gcaccggacg
     1561 acgcgcagcg tgcagttgac ggaggacgga cgcgcatttc atgcgcgtgc ccgcgatctg
     1621 ctcgctgaag tcgatgatct gcactcgatg ttcgcagacg atcgcgtggc acttcgcggg
     1681 cgtttgcggg tcgatcttcc gactgaagtg gcgcgcacaa cgatcgtgcc ggcgttgccg
     1741 gatttcatgg cggctcatcc cgagctgga
//
LOCUS       DATAVD010000951         2790 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1210030, whole genome shotgun sequence.
ACCESSION   DATAVD010000951 DATAVD010000000
VERSION     DATAVD010000951.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2790
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1210030"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            422..1996
                     /locus_tag="VHX39_18240"
     CDS             422..1996
                     /locus_tag="VHX39_18240"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3993116.1"
                     /translation="MARWDHGYVTDVAYTTNAYQETMPSWLAACSVLLGYRPPDLAAP
                     LRYADLGCGNGLSALIVAATNPQAEVWGFDFNPTHIENARVMADRAKLPNVHFEDISF
                     EALAQRQTNAGDLFDIIVSHGVLSWISLENRRHLTSIIGRWLRPGGLAYLSYNVSAGW
                     TGVEPIRLLMRQLAEADQRRTDQSVGDIFQVVDQLRTGGAAFFRANPGLEARLEQMKA
                     QDARYLAHEFLNRDWHPVMFADVAEAMADARTNYIGSATTMENIDAVAVPEGVLPVLA
                     GISQQAVRETIRDLASAKNFRRDLWRKGGETLPVQEHLALLDGMTLAWTGKTAEAEIT
                     FSGPIGTVTGQPEFYFPLLDAIREAPKTIGQLRAIPALRERQPGEFIQAALLLMGGGF
                     AHPRWSAPGMPQRAAGGRGKSQDGAARLNVAIINRLRMGVDLHRLAAPQIGSSVGIEV
                     MEGLVIGQLLDGTSRDPDALIDGVLNDVVRSGRSLLRDGKPLQNPAENRVLVGETVRS
                     VLARRLPVLRSLGVID"
     gene            2022..>2790
                     /locus_tag="VHX39_18245"
     CDS             2022..>2790
                     /locus_tag="VHX39_18245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX3993117.1"
                     /translation="MTEALAADVCVVGAGPVGGTLACVLASADISTVLVDRAALLPME
                     HPAFDGRAYAIASGSRALLQQSGLWEILPEPPNPILDIRVTDGWVGRPASRLHLHFDH
                     REAGDAPFGWMVEARSLRRALNRRVQALPGLQVFAPAEAAAERSEDGALVHIAGGPTV
                     SCRLVIAAEGRSSPLREAAGIPVTRFDYPQTGMVCAISHELPHQGVALEHFLPSGPFA
                     VLPMGPSTDAEAGGAPNVSAVVWTERSRIAATMLALDD"
BASE COUNT          468 a          837 c          957 g          528 t
ORIGIN      
        1 tgctgcgcaa ggaaacgggc gatttttggc gtcatcgcac ccgggcccct tctgtgacac
       61 gtccacctgt caaggcgatg gacggagttg acgaaacggt cgaacgaacc agcgaccaaa
      121 cgattgccag aacgcttgac gtcgttgcgt aaccactgag ggccagaggc acgtgcgttg
      181 ctgcgtgggg gacgcacata ggacccctac ccccctgacg caacagaaaa ttcacgctcg
      241 accgtgattt tttcgcggct gtcggagtaa accccggcac aacaccggtc gcccagtacc
      301 gccaactcac cgaaacctgc cacatccggc ttgacctggg catcggcatc gacttgttgt
      361 ggttgcagat ggccgggtcg ccctcggcca ttacgttgtg tttaaccagg aagcgacaac
      421 catggcgcga tgggaccacg gatacgttac cgacgtggcc tacacgacga acgcttatca
      481 ggaaacgatg ccgagctggc ttgcggcgtg ctcggtgctg cttggctatc ggccgcccga
      541 tcttgctgca ccgttgcgtt acgccgatct cggctgcggc aacgggttga gtgctctgat
      601 cgttgccgcc accaatccgc aggccgaggt ctggggcttc gacttcaacc ccacgcacat
      661 tgaaaacgcc cgggtcatgg ccgaccgggc gaagctgccg aatgtgcatt tcgaggacat
      721 ttcgttcgaa gccctggcgc aacggcagac caacgccggg gatttgttcg acatcatcgt
      781 ctcgcatggg gtgttgagct ggatctcgct ggaaaaccgt cgccatctga catcgattat
      841 cgggcggtgg ttacggccgg gcgggctggc ctatctgagt tacaatgtct cggcgggctg
      901 gacgggcgtg gagccgatcc ggctattgat gcgccaactg gccgaggccg atcagcgccg
      961 caccgatcag tcggtcggtg acatttttca ggtggtggac cagctgcgca ccggcggggc
     1021 cgctttcttt cgcgccaatc ccggcctcga ggcccggctg gagcagatga aagcccagga
     1081 tgcgcggtat ttggcgcatg agtttttgaa ccgggactgg catccggtga tgtttgccga
     1141 cgtggcggag gcgatggccg atgcccggac caactatatc ggcagcgcca cgacgatgga
     1201 gaacatcgat gccgtcgcag tgccggaggg cgttctgccg gtactggccg ggatcagtca
     1261 gcaggcggtg cgggaaacca tccgcgacct cgcatcggcg aagaattttc gccgcgatct
     1321 atggcgcaaa ggcggagaga cgcttccggt gcaagaacat ctcgcgttgt tggacgggat
     1381 gaccttggcc tggaccggca agacggcgga ggccgagatc acgttttccg ggccgatcgg
     1441 cacggtgacg ggccagcccg agttctattt tcccttgctg gatgccattc gcgaagcgcc
     1501 gaagacgatc gggcagttgc gcgcgatccc ggcgctgcgg gagcggcaac ccggagagtt
     1561 catccaggcg gctctgttgc tgatgggcgg cggatttgcc catcccagat ggtctgcgcc
     1621 agggatgccg caacgggcgg ctggcgggcg cggaaagtct caggatggtg cggcgcggct
     1681 caacgttgcc atcatcaatc ggttgcggat gggggtcgac ctgcaccgcc ttgccgcccc
     1741 gcagatcggc tccagcgtcg gcatcgaggt gatggaaggg ctggtgatcg gccaattgct
     1801 ggacggcacc tcgcgcgacc cggatgcgct gatcgatggc gtgctgaatg atgtggtacg
     1861 gtccggccgt tcgttgctgc gcgacggcaa gccattgcag aacccggccg agaaccgggt
     1921 gctggtcggc gaaacagtac gcagcgtgct ggcgcggcgg ttgccggttc tgcgcagcct
     1981 gggagtgatc gattgaaccg catcgcagag aggactggcg tatgaccgag gcgcttgccg
     2041 ccgatgtttg tgtggttgga gccggccctg tcggcggcac gctggcctgc gttctggcct
     2101 cggcggacat atccacggtc ctggtcgacc gggcggctct gctgccgatg gagcatccgg
     2161 cgttcgatgg ccgggcctat gcgatcgcgt ccggatcccg cgcgctgctg cagcaatctg
     2221 ggctgtggga gattctgccg gaaccgccca atccgatcct ggacattcgc gtgaccgacg
     2281 gttgggtggg ccggcccgcg tcgcggctac acctgcattt cgatcatcgc gaggcgggcg
     2341 atgcaccgtt cggctggatg gtggaagcgc gcagcttacg acgggcactg aaccggcgcg
     2401 tgcaggcgtt gcccgggttg caggtgtttg ccccggccga ggcggcagcg gaacgctccg
     2461 aagacggtgc gttggtgcat atcgcgggag gtccaacggt ctcctgtcgt ctggtgatcg
     2521 ccgcggaagg ccgttcctcg ccgttgcgcg aggctgcggg tattccggtg acccggttcg
     2581 actatccaca gaccgggatg gtctgtgcca tcagccacga actgccccat cagggcgttg
     2641 cgctggagca ctttcttccc tccggcccgt ttgccgtgct gccaatgggc cccagtacgg
     2701 atgccgaggc gggcggtgcg cccaatgtct ccgctgtggt atggaccgaa cggtcgcgca
     2761 ttgcggcgac gatgctggcg ctggacgacg
//
LOCUS       DATAVD010000952         1616 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2512175, whole genome shotgun sequence.
ACCESSION   DATAVD010000952 DATAVD010000000
VERSION     DATAVD010000952.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2512175"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..675
                     /locus_tag="VHX39_18250"
     CDS             <1..675
                     /locus_tag="VHX39_18250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993118.1"
                     /translation="DPTLLMYCHEGPWQKVDRIWTIHTDGTHNTLIHKRTMYMEIAGH
                     EFWGLDGETIWYDWQYPKGEDFFLASYNLKTGARTAYHMQRNEWGIHFNLTQDLSLFC
                     DDGGDPGQVARARDGEWIELLHPQMITSGPGALNTPAFWQPGVFHAEHLVNMSHHYYR
                     EEPNVRFSPDKSLVIFTSNMFGPSYVFGVEVNKAENPPAADVESTPDLARQFNPTDPP
                     GVPLVQ"
     gene            complement(905..>1616)
                     /locus_tag="VHX39_18255"
     CDS             complement(905..>1616)
                     /locus_tag="VHX39_18255"
                     /inference="COORDINATES: protein motif:HMM:NF012951.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HEX3993119.1"
                     /translation="RSRPEFYHAMLEDLRWLGTRWQEGPDVGGLGDVGAYGPYAQSER
                     GELYTAAWRLLVERGFVYPCRCSRKDLAAAVAAPHEEDLDDEPVYPGTCRPLHGADFW
                     TSESVGEVNWRFRVPDGEAIEFADANLGTQRFVAGVDFGDFVIMRRDGVPSYQLACVV
                     DDAAMRITEVVRGADLLKSTARQILLNRALAFADPAWFHCELVVDAQGRRLAKRHDAL
                     SLRLLRERGIAARDVVRV"
BASE COUNT          343 a          602 c          409 g          262 t
ORIGIN      
        1 gacccgactc tgctgatgta ctgccacgaa ggcccctggc aaaaggtcga ccgcatctgg
       61 accatccaca ccgacggcac gcacaacacg ctcatccaca agcgcaccat gtacatggaa
      121 attgccggcc atgagttctg ggggctcgac ggcgagacca tctggtacga ctggcaatac
      181 cccaagggcg aagacttctt cctcgccagc tacaacctga aaaccggcgc gcgcaccgct
      241 taccacatgc agcgcaacga gtggggcatc cacttcaatc tcacccaaga cctgtcgctc
      301 ttctgtgatg acggcggcga tcccggccag gtggcccgcg cccgcgacgg cgagtggatc
      361 gagctgctcc atccgcagat gatcaccagc ggccccggcg cgctcaacac gccggccttc
      421 tggcagcccg gcgtcttcca cgccgaacac ctcgtcaaca tgtctcacca ctactatcgc
      481 gaggaaccca acgtccgctt ctcgcccgac aagtcgctcg tcatcttcac cagcaacatg
      541 ttcgggccca gttacgtctt cggcgtcgaa gtcaacaagg ccgagaatcc tccggcagcc
      601 gatgtcgaat ccacgcccga cctggcgcgc caattcaatc ccaccgatcc gcccggcgtg
      661 cccttggtgc aatgaattct gacaagcttt gtatcagggc gcgacttcaa tcgtgccggg
      721 tgccccgggt cccgtctttg ggacctggga tagcacgaac accggctaaa ttcgctttgc
      781 gtcagggcat gacttcagtc gtgccgaaag gatcgcaaat aaaaataagg ggcttcagcc
      841 cctgagagcg gcgaaagtgg tgcaatttac tcacgccccg aaggacgcaa aatcgacccg
      901 cgtttcagac cctaacaaca tccctcgccg caatcccgcg ctcgcgcagc aggcgcagac
      961 tcagcgcatc gtgccgcttg gccagccgcc gcccctgcgc gtccaccacc agctcgcaat
     1021 gaaaccaagc aggatcggca aatgccagcg cgcggttcag cagaatctgc cgcgccgtcg
     1081 acttcagcag atccgctccg cgcaccacct ccgtgatgcg catcgccgca tcgtccacca
     1141 cgcaggcaag ctgatagctc ggcactccat cgcgccgcat gatcacaaaa tcgccaaaat
     1201 ccacgccggc cacaaaccgc tgcgtcccca ggttcgcgtc ggcaaattca atcgcctccc
     1261 catccggcac gcgaaaccgc caattcactt cccccactga ttcactcgtc caaaaatctg
     1321 ccccatgcaa cgggcggcat gtgcccggat ataccggctc gtcgtcgaga tcctcctcat
     1381 gcggcgcggc aaccgcggcc gccagatcct tccgcgaaca ccggcaggga tacacaaatc
     1441 cccgctccac cagcagccgc cacgccgctg tgtacagttc gccgcgctcg ctctgcgcat
     1501 aaggcccata cgcgcccaca tcgcccaggc cgcccacatc cggaccctcc tgccatcgcg
     1561 ttccaagcca gcgcaggtct tcgagcatcg catggtagaa ctcggggcgc gaccgc
//
LOCUS       DATAVD010000953         1752 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_93200, whole genome shotgun sequence.
ACCESSION   DATAVD010000953 DATAVD010000000
VERSION     DATAVD010000953.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93200"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..522
                     /locus_tag="VHX39_18260"
     CDS             <1..522
                     /locus_tag="VHX39_18260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993120.1"
                     /translation="DPETTVDANLHVDPASLQPEGSPTVTVRAKIYLTLFGDPHSKVI
                     PVLPEPVDAIDGLQCSVALFNEIYCRSLFRWPRRWVYAKGVENGLESYVRAISYSPFP
                     ATLGFNPVEQHSLTGGPSEKHVTITTKTPLSHFHVDVVLNNVDLNDYTQDAKRRAMTV
                     PKPLLRNAPVPHR"
     gene            606..1217
                     /locus_tag="VHX39_18265"
     CDS             606..1217
                     /locus_tag="VHX39_18265"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEX3993121.1"
                     /translation="MRRIKILEHISLDGVIQAPGGPEEDGDYPYGGWAAPYADPAVGE
                     TIVAAHGQSFDLLLGRRTYDIWSAYWPKAKSSPMADKLNTATKYVATHKPDTLAWGPV
                     EELGPDIVEGVRRIKAEDKPDLIVWGSSTLTPLLLRHELADEVLLIVFPVLLGTGKRF
                     FSEGTPPRALSLVSTKAASSGVIVNTYKPDGPLRTGTMGQAKT"
     gene            1219..>1752
                     /locus_tag="VHX39_18270"
     CDS             1219..>1752
                     /locus_tag="VHX39_18270"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX3993122.1"
                     /translation="MPFRVLIVGGTGQVGAAVVRALLAEPTCTEVVMLNRKTTPLPAD
                     HRLRQVVLDTATVQFPAEVTRLALDMVALGNPVYATSCVGVGKGSLNWTEEELKALEI
                     GVVGAFARGCHAGGIARFALLSAAGSTPRSRIQYARVMGLKEEAVRNIGFQNLAIFRP
                     GIIAGNAHTPGYLGWLGR"
BASE COUNT          363 a          541 c          509 g          339 t
ORIGIN      
        1 gatccggaaa caacggtcga tgcaaatctg cacgtcgatc cggcgagtct gcagccggaa
       61 ggctcgccga ccgtgaccgt tcgggcgaag atttacctga cgctgttcgg cgatccgcac
      121 agcaaagtga ttccggttct gccggaaccg gtggacgcga tcgacggact ccaatgttcc
      181 gtcgccctct tcaatgagat ctactgccga tcgctcttcc gctggccacg tcgctgggtc
      241 tatgcgaaag gcgttgagaa cggtctggaa tcctatgtcc gcgcgatttc ttattcgccg
      301 ttccccgcga cgctcggttt caatcccgtc gaacagcatt cgctcaccgg cggaccttcc
      361 gagaaacacg tgacaatcac gacgaaaact ccgctgagcc atttccatgt ggatgtggtg
      421 ctgaacaacg ttgacctgaa cgactacacg caggacgcaa aacgtcgcgc gatgacggtg
      481 ccgaagccgc tgctgcggaa tgcacctgtc ccgcatcgct aagcacggta cgaactcccg
      541 aggtgatcga acccgtcagc cttgcgtagt tgtgtcgagt cacgcctttt gctagcgtgg
      601 cgtacatgag aagaattaaa atcctcgaac acatctcgct cgacggtgtg attcaggccc
      661 ccggcggacc cgaggaagac ggcgactacc cctacggcgg atgggcagcg ccctatgccg
      721 accctgccgt gggagagacg atcgtcgcag cgcacggcca gtctttcgat ctcctgctgg
      781 gccgccgcac ttacgatatc tggagcgcct actggccaaa agccaaaagc agtccgatgg
      841 cggacaagct gaacaccgca acaaaatacg tcgccaccca caagccggac actctcgcat
      901 gggggccggt cgaagagctc ggaccggata tcgtcgaagg cgtgcgccgc atcaaggcag
      961 aggataagcc agaccttatc gtctggggca gttcgaccct gacaccgctg ttgctccggc
     1021 acgagctcgc cgatgaagtt ttgctgatcg tctttcccgt cctgttaggc acaggcaaac
     1081 gtttcttttc ggagggaact ccgccacgcg cgctctcgct cgtcagtacg aaggccgcgt
     1141 cctcaggcgt catcgtcaac acttacaaac ccgacggacc tttgcggacc ggcaccatgg
     1201 gccaggccaa aacataagat gccattccgc gtcctgatcg tcggtggcac gggacaagtc
     1261 ggcgccgcag tggtgcgagc gctgcttgcc gagcccacct gcacggaagt cgtaatgctc
     1321 aatcgcaaaa cgactcctct gcccgccgac catcgcttgc ggcaggtagt cctcgatacc
     1381 gcaaccgtgc agtttcccgc tgaagtgacc aggcttgcac tcgacatggt ggcgctcggc
     1441 aatcctgtct acgcaacctc ctgtgttggc gtcggcaaag gcagcctgaa ttggaccgag
     1501 gaggaattga aggctctcga gatcggggtt gtgggtgctt ttgcccgcgg atgtcacgct
     1561 ggaggcatcg cacgttttgc gctgctctcg gccgcgggaa gcacaccacg aagccggatt
     1621 caatacgcgc gagtgatggg attaaaagaa gaggcggtcc ggaatatcgg cttccagaac
     1681 ctcgcgattt tccgcccggg aattatcgca ggcaatgctc acacgcccgg ttaccttggc
     1741 tggctggggc gt
//
LOCUS       DATAVD010000954         2030 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2323336, whole genome shotgun sequence.
ACCESSION   DATAVD010000954 DATAVD010000000
VERSION     DATAVD010000954.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2323336"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..236
                     /locus_tag="VHX39_18275"
     CDS             <1..236
                     /locus_tag="VHX39_18275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993123.1"
                     /translation="GFLDYRCPVASDLPMIDTILVEVPNPVHPYGAKGVGEVNICPPM
                     AAIANAIESATQTRMTHLPMSPPRVLAAMSGGK"
     gene            261..512
                     /locus_tag="VHX39_18280"
     CDS             261..512
                     /locus_tag="VHX39_18280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993124.1"
                     /translation="MTATVAFTSGFARKYTNGVREFEVEAHNLRGVIREMEKLFPGLG
                     HALEEETTVAINGEMHETGYFQAVPPGAEVFFIPRIEGG"
     gene            961..1230
                     /locus_tag="VHX39_18285"
     CDS             961..1230
                     /locus_tag="VHX39_18285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX3993125.1"
                     /translation="MAAADDIGDPIAGHKLATAWCSNCHTLPDSKQAVATGAPSFSSI
                     AGNHSITPLSLRVFLQTPHPPMPDLHLSNPEMDDLVSYIQSTRKK"
     gene            1379..1876
                     /locus_tag="VHX39_18290"
     CDS             1379..1876
                     /locus_tag="VHX39_18290"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEX3993126.1"
                     /translation="MPLLSLHTPVGDLSVAEDDGAIVSVEWGWGRDQDETALLRSARE
                     QLHAYFDAELTAFDLPLAPAGSPYRQTVWRALLAIPYGATRTYLDIAREAGGSPRSVG
                     GANGANPIPVIIPCHRVVATNGPGGYSGGDGLPTKRALLRLEAPIAGSAKARAIWDNP
                     QATLI"
     gene            1895..>2030
                     /locus_tag="VHX39_18295"
     CDS             1895..>2030
                     /locus_tag="VHX39_18295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HEX3993127.1"
                     /translation="MSKAIRIHANGGPEVMKWEDVPTPEPGPGEALVHHQAVGLNYID
                     V"
BASE COUNT          396 a          601 c          646 g          387 t
ORIGIN      
        1 ccgggttcct cgactatcgc tgcccggtgg cgtcggatct gccgatgatc gacaccattc
       61 tggttgaggt gccgaacccg gtgcatccct atggcgccaa gggcgtaggc gaagtgaaca
      121 tctgcccgcc gatggcggcg atcgccaacg ccatcgagtc ggcgacacag acaaggatga
      181 cccacctgcc gatgtcaccg ccacgcgttc tggcggccat gtcgggcggc aagtaacccg
      241 gctcgaggaa gaggctggtt atgacggcaa cggtcgcctt cacctccggg ttcgcgcgca
      301 agtacaccaa tggtgtgcgc gagttcgagg tggaggcgca caatctccgc ggcgtgatcc
      361 gggaaatgga aaagctgttt cccggcctcg gtcatgcgct ggaggaagaa acgacggtcg
      421 ccattaacgg cgagatgcac gagaccggat attttcaggc ggtgccgccc ggggcagaag
      481 tgtttttcat tccgaggatc gagggcgggt agggcgtaac ggcggcaatt cgccgccaat
      541 tgcttgccga ccctgacaag gcggcggatg acgcgtgtta tggggccgtg gtgcgttgcg
      601 tcggggggcc ggcccttgat gcaaattcga ctgtttcggt tttccgcgct tcgtcaatgg
      661 gctggattgc atcgcgattt atctgaatga tccagattaa gcagacattc ggggggccct
      721 gtctgcaacc tcataaagcg cgtaacgagg acccgttacg attggcatcg attgttcaaa
      781 cagcgtgttc agcagtttgc tttgacccaa cctccgcttc gggaagccag gcgtgatccg
      841 atcaatgtga cgcgaacgaa aaaaggacga tctgggcgta tgaaaaaact gatctctgca
      901 aatcaccggc gtagcctgtg gatactgagc ctgacattcg caatttgggc gccgggcgcc
      961 atggctgccg cggacgatat cggcgatccg atcgccggtc ataaactcgc gaccgcgtgg
     1021 tgttccaatt gtcacacact gccggacagc aagcaggcgg tggcgaccgg cgcaccctca
     1081 ttttcctcaa ttgccgggaa ccacagtatc acgccgctgt cgttgcgggt ttttctgcag
     1141 acgccgcatc ccccgatgcc tgatttgcat ctgagcaatc cggaaatgga cgacctggtt
     1201 tcatacattc agtcaacacg caaaaaatga tcacgtggca aaccagggtg tgtcgccgca
     1261 cgcgggggtg acttgcgaca gcacgaccga cgccgcccag ggaagggtgg tttcatggtg
     1321 gctcttgaca ttggacgcgc ctggcgccga gatcgtatcc ggctcaacag ggcaacacgt
     1381 gccacttctc tcgctgcata ccccggttgg ggatctctcg gtcgccgaag atgacggagc
     1441 cattgtctcc gtcgaatggg gctggggacg cgaccaggac gagaccgcac tgctgcggtc
     1501 ggcgcgcgag caattgcatg cctatttcga tgccgaactc accgcattcg atttgccgtt
     1561 ggcgcccgct ggctcgccgt accggcagac tgtctggcgg gcgctgctgg cgatccctta
     1621 tggggcgaca cgaacctacc tcgacatcgc gcgtgaggcg ggcggcagtc cacgctcggt
     1681 cggtggggcg aatggcgcca atccaatccc ggtcatcatt ccttgccacc gggtcgtggc
     1741 caccaacggg ccaggtggtt actccggcgg cgacgggctg ccgacaaagc gcgctctgct
     1801 gcggctcgag gcaccgatcg cgggctcggc caaggcacgg gcgatctggg acaatccaca
     1861 ggcaacgctg atctgaaccg ggacggagag tgacatgtcg aaggccatcc gcatccacgc
     1921 caatggcggt cccgaggtga tgaaatggga ggatgtgccg actcccgagc ccggacccgg
     1981 tgaagcgctt gtgcatcacc aggccgtcgg cctcaattac atcgacgtct
//
LOCUS       DATAVD010000955         1738 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1952141, whole genome shotgun sequence.
ACCESSION   DATAVD010000955 DATAVD010000000
VERSION     DATAVD010000955.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1952141"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..328
                     /locus_tag="VHX39_18300"
     CDS             <1..328
                     /locus_tag="VHX39_18300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993128.1"
                     /translation="AHVPLWIVYQDWGWGTKDGGQALSYLKRFGSVTVLNGHIHQVMQ
                     KIEGHVAFHTARSTAFPQGVPGVAKGPGPYPVPAGELKNFLGTARISLVSAKSPLAIV
                     DTPLAG"
     gene            342..704
                     /locus_tag="VHX39_18305"
     CDS             342..704
                     /locus_tag="VHX39_18305"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin family copper-binding protein"
                     /protein_id="HEX3993129.1"
                     /translation="MRTLRLLITGWRHPVQSRAYRSGLLLACLLLPVIAWSDESAQLK
                     IDNFKFGPEKLTITKGTEVTWTNQDDIPHSIVLNALGVHSKALDTDKTFSYQFDKAGT
                     FTYICGLHPFMHGQIVVK"
     gene            complement(706..>1738)
                     /locus_tag="VHX39_18310"
     CDS             complement(706..>1738)
                     /locus_tag="VHX39_18310"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX3993130.1"
                     /translation="DPDALMRRFGPTALQEPAVVELTHMMLMRDPPDHTRLRGLVVKA
                     FTARRIEAMRARVHDQTNHLLDKVIPLGRMDMIRDLAFPLPVLVICELLGIPEEDQAR
                     FVTGSSSGAALLNPTPPTRAELDDANRGSLESAASFDALFKQRRREPRDDLITQLVQV
                     EEFGDRLTTAELRANVNLLFAAGHETTVNLIGNGFLSLLRHPEQWRNLCDDPSLVPNA
                     IEEILRFESPVQAVARTVAEPIELSGIALKPPAIVVSLIGAANRDPAVFENPDRFDIM
                     RKDIRPLSFGGGIHFCLGAQLARIEAAAVFETVARRLPTLQLVKLDQPKWRSSFTLRG
                     LTELPVAWG"
BASE COUNT          324 a          548 c          546 g          320 t
ORIGIN      
        1 cgcgcatgtt ccgctgtgga tcgtctatca ggactggggc tggggcacga aagacggcgg
       61 ccaggcgctg tcctacctga aacgcttcgg ctctgtgacc gtgctgaacg ggcacatcca
      121 ccaggtgatg cagaagatcg agggccatgt cgccttccat accgcccgct ccaccgcgtt
      181 cccgcagggt gtgcccggcg tcgccaaggg gcccgggcct tatcccgtgc ccgccggcga
      241 actgaagaac ttcctcggta ccgctcggat cagcctggtg tcggcgaaat cgccgctcgc
      301 catcgtcgat acaccgctgg ctgggtgagg gaggtcctat catgcgaacc ttgcggctcc
      361 tcatcaccgg ctggcgccat ccggtccaat cccgggcata tcgttcgggg ttgcttctcg
      421 cttgcctgtt gctgccggtc attgcgtggt ccgacgaatc cgcccagctc aagatcgata
      481 acttcaagtt cggaccggag aagttgacca tcaccaaagg caccgaggtc acctggacca
      541 accaggacga catcccccac agcatcgttc tcaacgcgct cggggttcac tccaaggcgc
      601 tcgataccga caagacgttc tcgtaccagt tcgataaggc gggaaccttc acctatatct
      661 gcggcctgca tccgttcatg cacggccaga tcgtggtaaa gtaactcaac cccaggccac
      721 cggcagttcg gtgaggccgc gcaaggtgaa gctggatcgc catttcggtt gatccagttt
      781 caccagctgg agggtcggca aacggcgggc aacggtctcg aacaccgccg ccgcctcgat
      841 acgcgccaac tgggcgccga ggcagaaatg aatgccgccg ccaaaggaca gcgggcgaat
      901 atccttgcgc atgatgtcga accgatccgg gttttcgaac acggccggat cgcggttggc
      961 tgcgccgatg agcgaaacca cgatcgcggg tggcttcaat gcgatgccgc tcagttcgat
     1021 cggttcggcg accgtgcgcg cgacggcctg gaccggggat tcaaagcgca ggatttcctc
     1081 gatcgcgttc gggaccaatg aaggatcgtc gcataggttc cgccattgct ccggatgacg
     1141 cagcagcgac aggaagccgt tgccgataag gttcaccgtc gtttcgtgcc cggcggcaaa
     1201 cagcagattg acgttggccc gcagttccgc cgtcgtcagc cgatcaccga actcttcgac
     1261 ctgcaccagt tgcgtgatca ggtcatcgcg tggctcccgt cgccgctgct tgaacagcgc
     1321 gtcgaaagag gcggcggatt ccagactacc gcgattcgcg tcgtccagtt ctgcgcgggt
     1381 cggtggcgtt gggttcagca gtgccgcacc ggagctggaa ccggtaacga accgggcctg
     1441 atcttcctcc gggatgccca gcaactcgca aatcaccagc acgggcagcg gaaatgccag
     1501 gtcgcgaatc atgtccatgc ggccgagcgg gatgactttg tcgagcaggt ggttggtctg
     1561 gtcatgcaca cgcgcacgca tggcctcgat ccggcgcgcg gtgaacgcct tgacgacgag
     1621 gccgcgcagg cgcgtgtggt cggggggatc gcgcatcaac atcatgtgtg tcagttcgac
     1681 caccgccggt tcctgcaagg cggttgggcc gaaacggcgc atcagggcgt cgggatcg
//
LOCUS       DATAVD010000956         2060 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1766117, whole genome shotgun sequence.
ACCESSION   DATAVD010000956 DATAVD010000000
VERSION     DATAVD010000956.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2060
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1766117"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1910
                     /locus_tag="VHX39_18315"
     CDS             <1..1910
                     /locus_tag="VHX39_18315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HEX3993131.1"
                     /translation="EFVNAVRFLGPGFGGINLEDIKAPECFVIEQRLRELMDIPVFHD
                     DQHGTAIVAAAGLINACHLTGRELRETKLVVNGAGAAAIACVELLKAMGMRPDHVILC
                     DTKGVVYQGRTDGMNQWKSAHAAATNARTLSQAMEGTDVFFGLSVKGALTQQMVASMA
                     DKPIIFAMANPDPEITPEEARAVSPHAIIATGRSDYPNQVNNVLGFPYIFRGALDVRA
                     STINDTMKIAAAEALAKLAREDVPDEVHSASAGRRLAFGPEYIIPNAFDPRLIARVPS
                     AVAKAAMDSGVARKPIEDIRRYTRGLSGRLDPTADALDATMEMVRENPRRVVFAEGEE
                     QKIVRAAVAFRNAGYGQPILIGREDRVRATIAGLGIGDIDGIEIHNARLSGNNKKYVD
                     FLYARLQRQGHLQRDIQRIVNQDRNVFAACMVATGDADAMVTGLTRSASVCLSDIRHA
                     IGPAKGAIPFGLSLLVGMRGKTIFLADTLVNFRPDATQLADIVVGAAAAARHLGHEPR
                     VALLSHSTFGDPAHDRVIPMRDAVAILDERKVDFEYDGELSPDVALQPSIRALYPFCR
                     LTGDANVLVVPGLHSAHIAGRLAHHLGGGTTIGPLLLGLEKPVQIMSMDASSSQIVDL
                     ACLAAYQAISL"
BASE COUNT          384 a          643 c          631 g          402 t
ORIGIN      
        1 aggaattcgt caacgccgtt cgttttctgg gaccgggctt cggcgggatc aacctggagg
       61 acatcaaggc accggagtgc tttgtcatcg aacagcgcct gcgcgagttg atggacatcc
      121 cggtcttcca cgatgaccag cacggtaccg cgatcgtcgc cgcggcggga ctgatcaatg
      181 cctgccatct caccggtcgt gagcttcgcg aaaccaagtt ggtcgtaaac ggtgccggtg
      241 cggcggcgat tgcgtgcgtc gaattgctga aggccatggg tatgcgacca gaccatgtga
      301 tcctttgcga caccaagggc gtcgtctacc aggggcgcac ggacggcatg aaccagtgga
      361 agtcggccca tgccgcggcc accaacgctc gaaccctcag tcaggccatg gaagggaccg
      421 acgtattctt cggtctctcg gtgaagggtg ccctaaccca gcagatggtc gcgtccatgg
      481 ccgacaagcc gatcatcttc gccatggcca atccggaccc cgaaatcacg ccggaggagg
      541 caagggccgt cagcccgcat gcgatcatcg ccaccgggcg cagcgattat cccaaccagg
      601 tgaacaacgt cctcgggttt ccttacattt tccgtggcgc gttggatgtt cgggccagca
      661 ccatcaacga cacgatgaaa atcgccgccg ccgaggcatt ggccaagctc gctcgggagg
      721 acgtacccga cgaggtccat tcggcctcgg ccggccgtcg cctggctttc ggtcctgaat
      781 atatcattcc taatgccttc gatccgcggt tgatcgcccg ggtgccttca gcggtcgcga
      841 aggccgcgat ggattcaggc gttgcacgca agccaatcga ggatatccgt cgctatacgc
      901 gcggcctctc agggcggctg gatccgaccg ccgacgccct cgacgcgacg atggagatgg
      961 tgcgggagaa cccacgccgc gtggttttcg cggaaggcga ggaacagaag atcgtgcggg
     1021 ctgccgtcgc gttccgcaac gcaggctacg ggcagccgat cctgatcggg cgggaggatc
     1081 gcgtcagggc aacgattgcc ggcctcggca ttggcgatat cgacggtatc gaaattcaca
     1141 acgcccgctt gtccggcaac aacaagaaat atgtcgattt cctgtatgcc cggctacagc
     1201 gtcaagggca tctgcaacgc gatatccagc gcatcgtcaa tcaggaccga aacgtttttg
     1261 ccgcgtgcat ggtagcaacg ggtgatgccg atgccatggt cactggactc actcggtccg
     1321 cgtcggtttg tctgagcgac atccgccatg cgatcgggcc ggcgaagggc gcgataccgt
     1381 tcggactgag cctgttggtc ggcatgcgcg gtaaaacgat cttcctggcg gataccttgg
     1441 tcaattttcg tcccgacgcc acccaactgg ccgatatcgt cgtcggggcc gcagcggctg
     1501 cccgtcatct tggccatgag ccgcgggtcg ccctgttgtc gcactcgaca ttcggcgatc
     1561 ctgcacacga tcgggtcatt ccgatgcgcg atgctgtcgc aattctcgat gaacgaaaag
     1621 ttgatttcga gtacgacggc gagttgagtc cggacgtggc gctgcagccg tccatccgcg
     1681 ccctgtaccc gttctgtcgg ttaaccggcg acgcgaatgt ccttgtcgtt cccggacttc
     1741 attctgccca catagcggga cgcctggcac accacctggg cggtggcaca acgatcggcc
     1801 cactgcttct cggtttggag aagccggtcc agatcatgtc catggatgca tcgtccagcc
     1861 agatcgtcga tctggcctgc ctcgccgcct atcaggccat cagcctgtaa gcagcgggcg
     1921 catacctgga gacgccaagc cggctagatc gccggttcgg cactctgccg agttggcagg
     1981 tcgctttgcg gttgatcggt gatcatctca attcgaccgc tgatctggcc accatcctcg
     2041 acctgcaggc gccggcagcg
//
LOCUS       DATAVD010000957         2082 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_650446, whole genome shotgun sequence.
ACCESSION   DATAVD010000957 DATAVD010000000
VERSION     DATAVD010000957.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_650446"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1033)
                     /locus_tag="VHX39_18320"
     CDS             complement(<1..1033)
                     /locus_tag="VHX39_18320"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent alcohol dehydrogenase"
                     /protein_id="HEX3993132.1"
                     /translation="MRAAVFHAPHQPLTIEEVEIEKPKRREILLRTAYAGLCHSDLHF
                     MEGLYPYPAPAVLGHEGAAVVEAVGEDVTYVKPGDHVITCLSVFCGECDYCTTGHTNL
                     CDNTEVKLLPGAARRLKWKGQTLNQAFNLSVFAENMLVHEHAVVKIGKDIPLDRAALV
                     GCGVMTGVGAVFNAAKVEPGSTVAVVGCGGIGLSAVNGAALAGASRIIAIDTNPSKLE
                     KAREMGATDIINASNVDPVAAVKDMTNGQGVPYSFEAIGLKTTAEQCFAMLRPGGLAT
                     IIGMIPFGTKIELHGADFLRDRKIQGTSMGGNRFRVDMPRLLELWRQGRLKLDTLISG
                     KIKLDAINEG"
     gene            complement(1363..1755)
                     /locus_tag="VHX39_18325"
     CDS             complement(1363..1755)
                     /locus_tag="VHX39_18325"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX3993133.1"
                     /translation="MTLEELQRLMPGLPELLGLRVIRAESELVVAELTVRPEICTLGD
                     TIHGGAIMAFADTVGAMGTVMNLREGQGTTTVESKTNFFAGAKVGTTLTAESVPLHRG
                     RRTQVWETRITNPDGRLVAKVTQTQMVL"
     gene            1821..>2082
                     /locus_tag="VHX39_18330"
     CDS             1821..>2082
                     /locus_tag="VHX39_18330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993134.1"
                     /translation="MTDHAETTIQRIYHSDAFRRAAGILAAEHERTVEDIIRLTEIEA
                     PSFNETARAQTWFDMAQAHGLTDLEIDAEGNVTGMRRGIGNGP"
BASE COUNT          409 a          635 c          606 g          432 t
ORIGIN      
        1 agccttcgtt gatggcatcg agtttgatct tgccggagat caaagtgtcc agcttcaggc
       61 gtccctgccg ccatagttcc aacagccgcg gcatgtcgac gcggaaccgg ttgccgccca
      121 tgctggtgcc ctgaattttg cggtcacgca ggaagtcggc accgtgcaac tcgatcttgg
      181 tgccgaatgg gatcatgccg atgatggtcg cgagcccgcc cggccgcagc atggcgaagc
      241 attgctccgc tgtcgttttc agaccgatcg cctcgaacga gtatggcacg ccttgaccat
      301 tggtcatgtc cttgaccgcc gcgaccggat cgacgttgga agcgttgatg atgtcggttg
      361 cacccatctc gcgggctttc tccaacttgg atgggttggt atcgattgca ataatcctcg
      421 acgcacctgc cagtgcagca ccattcactg ccgagagacc gataccgccg caaccgacga
      481 ccgcaacagt tgagccaggc tcgacctttg cggcattgaa cactgcgccg acaccggtca
      541 tcacgccgca gccaaccaga gccgcgcgat cgagcgggat gtccttgcca atttttacga
      601 ccgcgtgttc gtgcaccagc atgttttcgg caaataccga caggttgaag gcctggttca
      661 gagtttggcc tttccacttc aggcgtcgcg cggcacctgg cagcaatttc acttcggtgt
      721 tgtcacacag attggtgtgg ccggttgtgc aataatcgca ctctccgcaa aacaccgaca
      781 ggcaggtgat gacgtgatcg ccgggtttga cgtaggtgac gtcctcgccg accgcctcga
      841 caacggccgc gccctcatgg ccgagaacgg cgggtgccgg ataggggtac aggccctcca
      901 tgaaatgcag gtccgagtgg cacaggccgg cataagcggt gcgcaacaga atttcgcgcc
      961 gcttcggctt ttcgatttcg acctcttcga tggtcaaagg ctggtggggc gcgtggaaga
     1021 ccgctgctct catgttggtt ccctccggtt aggtcggcga gcctggcggc tgccggtcgg
     1081 ccacgcaagt actacgtacg cgtggataga cgcgggaggg ggagtttgtt aataattcgg
     1141 ctcccggcgg atgggttgac accacccgtc ggggccgatc gaggtagcga cttaacggaa
     1201 cgatatcctg atccgtattc gccgtttgcc ccatcggagt tctacgtcga cgcaaagcat
     1261 ctacgctttc ctccttagcg gcttaattgc cgcgccccga ccgtgatgag aacgtgttaa
     1321 aataacatga acatggcggt cggggcgcag taacctacgg catcacaaga ccatttgtgt
     1381 ttgcgtgacc ttggcgacca gccgtccgtc cggattggtg atgcgcgttt cccacacctg
     1441 agtgcggcgg ccgcgatgca gcggcacact ttctgccgtc agtgtggtgc caactttcgc
     1501 tcctgcgaaa aagttggttt tgctttccac cgtcgtggtg ccctgccctt cgcgcaaatt
     1561 catcaccgtg cccatcgcgc ccaccgtgtc tgcgaacgcc atgatcgcgc cgccatggat
     1621 cgtatcgcca agcgtgcaaa tctccggccg cacagtcagt tctgcaacca ccagttcgga
     1681 ttctgcacgg atcacccgta acccgagcag ttcggggaga ccgggcatca gccgttgcaa
     1741 ctcttccagg gtcattcgac aaatcctccg ttttgcggca tattgccggg aatttgccgc
     1801 gcgcctcaag gaccagcgac atgaccgatc acgccgagac aacgatccag cgaatatacc
     1861 acagtgatgc gtttcgccgt gctgccggaa tcctcgcagc cgagcatgaa cgaacggtcg
     1921 aagacattat ccgcctgacc gaaatcgaag cgccgtcctt caacgaaacc gcgcgcgcgc
     1981 agacatggtt cgacatggcg caggcgcatg ggctgaccga tctggaaatc gacgccgaag
     2041 gaaacgtcac gggaatgcgc cgcggcatcg gtaatggtcc gc
//
LOCUS       DATAVD010000958         2083 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2512288, whole genome shotgun sequence.
ACCESSION   DATAVD010000958 DATAVD010000000
VERSION     DATAVD010000958.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2512288"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(281..1192)
                     /locus_tag="VHX39_18335"
     CDS             complement(281..1192)
                     /locus_tag="VHX39_18335"
                     /inference="COORDINATES: protein motif:HMM:NF039819.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tube protein"
                     /protein_id="HEX3993135.1"
                     /translation="MTQPTTASMGWAAQLGTISESTYGTPPGAVTEGFVFASESVRKR
                     ALIVERNGIRGSRSHVADDTRQGPYQVMGSLVLEPTPADLSIWLPRILGGAPSSGTYP
                     LSDTLPSFTLSIDRVAKVFTYAGCKVNRATFQGSKGGMVRLTLDIAGQSETIAAAGSF
                     PTLSPSTEHGPYIFSGDPTLTLAGVSREVADFELAIDNRLVTDRFMNSITVVTLPEGD
                     RMITLRTTHAWASQNTDLYNQALAGAAGALAFSNGGSSTAFNFGALQVPAESPGTAGK
                     QEILLRLNMVARKTGSTLELSVTNTAA"
     gene            complement(1302..>2083)
                     /locus_tag="VHX39_18340"
     CDS             complement(1302..>2083)
                     /locus_tag="VHX39_18340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993136.1"
                     /translation="PSGQRSAPKLTVADNGNGSGAAASISGTISTSRVTVYVATFGGQ
                     PGSSGWNAVGIRAGNGGMALSVPVGHYFGYASALDANGGTAASPVNYVTVTNGSQAIA
                     YQCLTAAQARIQSLLLPNLDGANVVVRKLPIDRYLGPGQSTGLPAILLTPVTEQMPPA
                     EGVNSKDDVLYGVLCTIVDADNQEPTLTANLPLFTLWRQSIARAFRCQRLNGVASFDG
                     TNPIINASVEPADQLIPAAWTANLYASALLLRFVSREPRGL"
BASE COUNT          395 a          629 c          656 g          403 t
ORIGIN      
        1 cgtcatgaag gcttgattcg caagcggcga tccttggtcg gcgatctgga tgcggccctg
       61 gacctcgaac cgcacgcgaa tcgcggcggg gatgccgctc tcgtattcgg cctgttgcga
      121 gacgcttaag gccccctcgc caattgcgtg ccgataattt ccgtattgga tatacataag
      181 actggcaatc ctggcttctc tcgacctcgt gccgcagcgg cgcgaacgag ccccacctaa
      241 tgcgctgata cttgaaacgc cgctgaacag gacggctgcg tcaggcggcc gtgttagtga
      301 ccgacaattc caacgtggat cccgtcttgc gggccaccat attcagccgc agcaggatct
      361 cctgctttcc cgcagtgccc ggactttcgg cgggaacttg cagcgcgccg aagttgaatg
      421 ccgtcgaact gccgccgttg ctaaaagcca gcgcaccggc ggcgccggcc agagcctggt
      481 tgtataaatc cgtgttctga gaggcccagg catgcgtggt gcgcagcgtg atcatccgat
      541 cgccctcggg cagcgttacg accgtgatcg agttcataaa tcggtcggtg accagccggt
      601 tgtcgatcgc caattcaaaa tcggccactt cccgcgaaac gccggcaagc gtcagcgtcg
      661 ggtcgcctga gaatatgtaa gggccgtgtt cggtgctcgg gctcaacgtg ggaaatgaac
      721 cggccgcggc gatcgtttcc gactggccgg caatatctag cgtcaggcgc accatgcctc
      781 ccttggagcc ttgaaaggtt gcccgattga ccttgcagcc ggcgtaggtg aagaccttcg
      841 ccacgcgatc gatcgacagc gtgaaactgg ggagcgtatc gctaagcggg tacgtgccgc
      901 tgctgggggc gccccctaag attcgcggca gccagatgga caaatccgcc ggcgtgggct
      961 ccagcacgag cgaacccatg acctggtagg ggccttgccg cgtgtcgtca gccacatgac
     1021 tgcgcgagcc gcgaattcca ttgcgctcga cgatgagcgc ccgcttcctc accgattcgc
     1081 tggcgaagac gaatccttcg gtgacggcgc cgggcggggt gccataggtg gactcggaga
     1141 tcgtgcccaa ctgcgccgcc cagcccatcg aggccgtggt tggttgcgtc atgattctgt
     1201 tctcctaact taaagaaagg cgacgtcagg ttaagggatg gtgtgtgggc cggccgcccg
     1261 catcacgcag tcgcttggcc accctatcaa accggcaagt tctacaatcc tcgcggttcg
     1321 cggctgacga atcgcagcaa caaagcggag gcatacaaat tcgcggtcca ggctgctggg
     1381 atcagttggt cggccggttc gaccgatgcg ttgatgattg gattagttcc gtcaaagctg
     1441 gcgacgccat tgagccgttg acaacggaag gcgcgggcaa tgctttgccg ccacagcgtg
     1501 aatagcggca gatttgcggt cagcgtcggt tcctgattgt cggcgtcgac gatcgtgcaa
     1561 agcaccccgt aaaggacatc gtctttggag ttgactcctt ccgccggtgg catttgctcg
     1621 gtgaccggtg tcaggaggat tgccggcaga ccggtcgatt gccccgggcc caaatagcga
     1681 tcgatgggca gcttgcggac gacaacgttt gcaccgtcca ggttcggcag caacaacgat
     1741 tgaatcctgg cttgcgcagc cgtcaggcat tgataagcga ttgcctgact gccattggtc
     1801 accgtgacgt aattcacggg cgatgcggca gtgccgccgt tggcatccag cgccgaggca
     1861 tagccaaagt aatgtcctac cgggaccgac aatgccatac cgccgtttcc cgcgcggatg
     1921 cccaccgcat tccagccgga cgatcccggt tggccgccga aggtggcgac ataaaccgtg
     1981 acgcgcgaag tggagatggt gccgctgatc gaggccgccg ctccggaacc attgccgtta
     2041 tcggccacgg tcagcttggg cgcggaccgc tggccggacg gcg
//
LOCUS       DATAVD010000959         2551 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_839376, whole genome shotgun sequence.
ACCESSION   DATAVD010000959 DATAVD010000000
VERSION     DATAVD010000959.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2551
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_839376"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(610..1032)
                     /locus_tag="VHX39_18345"
     CDS             complement(610..1032)
                     /locus_tag="VHX39_18345"
                     /inference="COORDINATES: protein motif:HMM:NF017856.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEX3993137.1"
                     /translation="MAAFAAYLPTHVIGLHQGFWSAITAIAVTQARFRDTASTARKQF
                     VGAAVGGVVGLVLLLGLGDHLLVYAVAVMVSIILCWALNVADCSQLAAITATIILLVP
                     WSGSPEVTFFSRVSEVGWGVCVGVSIVWLEERVPSNKR"
     gene            complement(1297..>2551)
                     /locus_tag="VHX39_18350"
     CDS             complement(1297..>2551)
                     /locus_tag="VHX39_18350"
                     /inference="COORDINATES: protein motif:HMM:NF013927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0017000 - antibiotic biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin acylase family protein"
                     /protein_id="HEX3993138.1"
                     /translation="ITERSVDIAVRGVGMRHATLRESRFGPVISDVKRLGLQQPTALG
                     WVGHQPSDELTAMLTMNRAEDFAAFRHALRGFAVQGYSFTYADATGRVGILRAGHVPA
                     RPGTPADILEPASVLNDITSLAEATGVFDPREGFVVSANEDPQTAVQAGFFFAPSDRA
                     LRQAALLDCTGIERADLEALQKDVTSSSARQLRDALARRATELGLRLPQAVLDWNGCY
                     DEESVGALAYEVLLAETADMVIGKAILAPVLAVWTSRALVASTLLGTPNALLRRGLSH
                     GAKRAAQAISKGKCWGDAHLLHLAHPLARLPIWGRKFGVHIFGVPGSNDTLYKTGHGP
                     ARCGRRQSGHRVTYGSSARHLADFVDPDANFVIIMGGQDGWIGSVNATDQIPLWREGR
                     YLRLPLTSACVAASFGRLTQLTPPP"
BASE COUNT          543 a          808 c          766 g          434 t
ORIGIN      
        1 agtcaacaag cagaagcaga tagagaattg atcttcgggg ctggcccaag ctgttcgtca
       61 actgacggcg ctggagcctg ccgagcacgt ggcggaatgg ataagactga cggaggacaa
      121 gctaaaggcg caagttgcgc ctttagcgga gccgcacgac cgaggccgag ctaaccaagg
      181 catcaacgcc gcgacccgcg aactcggcct cgaccgcacc gcgccgctcc gttaaggttg
      241 ccggccaaac agcttccgat cagtagtacc gccaacggcc gtttctataa gcgcggtggt
      301 tataatacct cccatggtag cggtaagcat agtgtctgcc atggtagtta taataagcat
      361 gcacgctcaa actgtgcgac ggcgatataa gtgcctgagc aggaagcgcg aacgccggag
      421 cggcaacggc accatgcgtc ccagaaatgt acaaaaaacc agccagagca atcgacgaaa
      481 taaggcttac ccgcttcagc gttttcatga ccatctccac ctaacaaaag aaatttagtg
      541 ctgagggggt caaccgtcaa tattccggac gagggcagcc gtcgtttcat aacacctgtt
      601 gccgataatc tatctcttgt tcgaaggcac gcgctcttcc aaccacacga tcgacacgcc
      661 aacgcaaacg ccccacccga cctcggagac gcgtgaaaag aacgtcacct cgggtgatcc
      721 gctccatgga accaggagaa tgattgtggc cgtgatggcg gcgagctggc tgcaatctgc
      781 gacgttgagg gcccagcaaa ggatgatgga gaccatgaca gccacggcat acacaaggag
      841 gtggtcacca agccccagga gcaggacaag gccgaccaca ccaccgacgg cagcgccaac
      901 gaactgcttg cgggccgtgc tcgccgtatc gcggaaccgc gcctgggtca cggcgatggc
      961 ggtgatggcg ctccagaagc cctgatgaag gccaatgaca tgggtgggga gataggcggc
     1021 gaaggccgcc ataacagaga tgagcgcctg tcggctgccc aaggacagcc gattggtaag
     1081 agcggcgaac ctgaactcag gccgcaccga aggaccttgc ggccgtcatt tctggcccct
     1141 cctcagtcgc accccgctcc ccccgccgtt cttgggggtg aactccacgc cggccgcctc
     1201 ggcatccttg gtagcttgtt ccgccgccca gcctaagccc ttgatttaaa tggcgtgcca
     1261 tgggcgatga actgggcact ggaagctctt gaattgtcac ggtggtggcg taagttgtgt
     1321 cagtctgcca aaactcgccg ccacgcaagc cgaggtgagc ggtaggcgga gatacctgcc
     1381 ttcgcgccag agcgggattt ggtcggtcgc gttcacgctg ccgatccaac catcctggcc
     1441 gcccatgata atcacgaaat tggcatcggg atcgacaaag tcagccagat gtcgggctga
     1501 ggaaccataa gtgacgcgat ggccgctctg gcggcgtccg caccgcgccg gaccgtgccc
     1561 ggttttgtac aacgtgtcgt tgctgccggg tacgccgaag atatggacgc caaatttccg
     1621 cccccaaatc ggcagacggg ccaatggatg cgccaagtgc agcaaatgcg catcgcccca
     1681 gcatttgccc ttcgaaattg cctgcgccgc gcgcttcgcc ccgtgcgaca agccacgtcg
     1741 gagcagggca ttcggtgtcc ccagtaaggt ggacgcaacc aacgcccggc ttgtccaaac
     1801 cgccagtacc ggtgccagta tcgccttgcc gatgaccata tcggcggtct ccgccaggag
     1861 cacctcgtag gccagggctc cgaccgactc ctcgtcatag cacccgttcc agtccagcac
     1921 ggcctgcggc agcctgaggc cgagttcggt cgcccgccgt gccagtgcgt cacgcaattg
     1981 gcgcgcggag gacgacgtca catccttctg cagcgcctcg agatctgccc gttcgatccc
     2041 ggtgcagtcc agcagcgcgg cctgccgcag ggcccgatcc gacggcgcga agaaaaagcc
     2101 ggcctgcacg gcggtttgcg gatcttcatt ggccgagaca acaaacccct cgcgcgggtc
     2161 gaacacgccg gttgcctcgg cgagcgacgt gatatcgttc agcacggagg ccggttcgag
     2221 gatgtccgcc ggcgttccgg ggcgcgccgg tacgtggcct gcacgaagaa tgccgacacg
     2281 cccggtcgca tcggcgtagg tgaagctata cccctgaacg gcgaagccgc gaagcgcatg
     2341 tcggaacgcc gcgaaatcct ccgcacgatt cattgtcagc attgcggtca attcgtcgct
     2401 cggctgatgc ccaacccagc cgagcgccgt cggctgttgc agcccaaggc gtttgacgtc
     2461 ggaaatcacc ggcccgaatc ggctttcccg aagcgtcgca tgtcgcatgc cgacgccgcg
     2521 taccgcgatg tctacgcttc gttcggtgat c
//
LOCUS       DATAVD010000960         1560 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3441377, whole genome shotgun sequence.
ACCESSION   DATAVD010000960 DATAVD010000000
VERSION     DATAVD010000960.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3441377"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1560
                     /locus_tag="VHX39_18355"
     CDS             <1..>1560
                     /locus_tag="VHX39_18355"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid adenylation domain-containing
                     protein"
                     /protein_id="HEX3993139.1"
                     /translation="MQNFTNISHLNQPGSEGQAPELVLAPMNLDLAIADAVFKGTDAS
                     EERQRARIVQLADLTMNFGENNGVFKGELNYRMDLFRPETAERICRYFINILRSGLAG
                     PTKRLSELTVLDEPEREWLLSRSRTLPALKAGDRWIHGLFEENCRQNPQAVAVAWGDR
                     RFTYAELNHRVNQLARHLRRKGVEPGQTIGICLERSLDLIVAVLGVLKAGGAYLPLDP
                     DHPKERLEFVLKDAKAALLLTQTSLRSQQVDLGVATLCIDEVAAEIALESAVDPTVPL
                     SGEAPAYVIYTSGSTGEPKGVRITHANILNAYRAWDAEYRLREDVRSHLQMANFAFDV
                     FTGDLVRALCSGAKLVLCPRDFLADPEQLYELMEREEVDAAEFVPVVLRGVMKFLESS
                     GKWLDFMRLLVVGSDTWYVKEHEALKMYVGADTRVINSYGLTEATIDSSYFEGDASEL
                     PPDGVTPIGKPFPNTQMYVLNQRLRQLPVGVWGELHIGGPGVAHGYLNRDELTAEKFV
                     ANPFVAEPGAR"
BASE COUNT          340 a          430 c          464 g          326 t
ORIGIN      
        1 gatgcagaac tttacgaaca tcagccatct gaatcaaccg gggagcgagg gccaagcgcc
       61 ggagttagtt ctcgctccca tgaacctgga tcttgcgatc gccgacgcgg tattcaaagg
      121 gacggacgca agcgaggaac gtcagcgggc ccgaattgtg cagttggcgg atctgaccat
      181 gaattttggc gagaacaacg gagtttttaa gggcgagttg aattatcgca tggacttgtt
      241 tcgtcccgaa acggccgaac ggatatgccg ttacttcatc aacattctgc gcagcggact
      301 cgccgggcca acgaagcgcc tttcggagct aacagtcctg gacgaaccag aacgcgaatg
      361 gctgctgtcg cgctcgcgga cattgcccgc gctgaaagcg ggggatcgat ggattcatgg
      421 attgttcgag gaaaattgtc ggcaaaatcc gcaagccgtg gccgtggcct ggggcgaccg
      481 acgcttcacc tatgcggaat tgaaccaccg tgtcaatcaa ctggctcgac atctgcgccg
      541 aaaaggggtc gagcctggtc aaacaattgg catttgtctc gaacgctcac tcgatctgat
      601 tgtcgccgtt ttaggcgtgc tcaaagcagg cggcgcctat cttccgctgg acccggacca
      661 tccgaaagag agactggaat tcgttctaaa ggatgctaaa gccgcactac tgttgaccca
      721 aacatctctg cggagccagc aggtcgatct gggcgtcgcg accctatgca tcgatgaagt
      781 cgccgcggag attgccctgg agtcggcagt cgatccaacg gtgccgttga gcggcgaagc
      841 accggcctat gtgatctata cctcgggttc gaccggcgaa ccgaagggcg tgcggatcac
      901 tcatgcgaac atcctcaatg cctaccgcgc atgggatgcg gagtaccggc ttcgcgagga
      961 tgtccggtcg cacctgcaaa tggcgaactt cgcgttcgac gttttcacgg gagatctggt
     1021 gcgagcgctt tgttccggcg ccaaactcgt tctatgcccg cgcgattttc tggcggatcc
     1081 cgagcaactt tatgaactga tggaacgcga ggaggtcgat gccgcggaat tcgtgcccgt
     1141 tgtcttgcgc ggcgtgatga aatttctgga aagctcgggc aaatggctcg atttcatgcg
     1201 tctcctggta gtaggttcgg acacatggta cgtcaaagaa catgaagcgt tgaagatgta
     1261 cgtcggcgcg gatacccggg tcatcaattc gtacggcctg accgaggcca cgatcgatag
     1321 ttcttatttc gaaggcgacg catcggaact gccccccgac ggagtgacgc cgatcggcaa
     1381 accatttccg aacacccaaa tgtatgttct caaccaacgc cttcggcaac ttcccgtcgg
     1441 cgtctggggg gaattgcaca tcggcggacc gggagtcgcc cacggctatt tgaaccgtga
     1501 tgaattgacc gccgagaaat tcgtggccaa tccgtttgtc gccgagcccg gcgcccgttg
//
LOCUS       DATAVD010000961         3612 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3441508, whole genome shotgun sequence.
ACCESSION   DATAVD010000961 DATAVD010000000
VERSION     DATAVD010000961.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3612
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3441508"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1076)
                     /locus_tag="VHX39_18360"
     CDS             complement(<1..1076)
                     /locus_tag="VHX39_18360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993140.1"
                     /translation="MTQRSYHPVLRFAFGIVMALLALCSVEMAMRYLNRPRGVISGWT
                     TTATKGPFNPFGYRGQPTNPFRATDFIVVLTGAAAVECLACPPDETLDLMLQRALRQY
                     NPDVRVVTLGSSGYGQDQEYLALHQLLDSRHADLVIDWASFAEDVPANTFRLGEPRPG
                     QLLPKPTFALRANDSIGPTEGIGGQVYKAKLSTLFRPMFIDLDRNWTTLLPKADPGAD
                     SPPPSAETQSHVNADLEAQRTAWSIWLTPRPARVRYGMALTHALLRHMQELSRLRGAR
                     FEILLTPAQYGPHSDAPMALVHNGHWFLADPAARDAAITEITAGFDTITLKQESGPPA
                     EPEAERQIMARLAEALNQRGLLTEV"
     gene            1462..2394
                     /locus_tag="VHX39_18365"
     CDS             1462..2394
                     /locus_tag="VHX39_18365"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEX3993141.1"
                     /translation="MKIVACNSNRPLAEAVARNLGMALTQAQIRRFADMEVFVEILDN
                     VRGEDVFVIQSTSFPANDNLMELLITLDALRRSSARRITAVVPYFGYARQDRRSGSRT
                     PISAKLVANLITEAGAHRVLTMDLHAGQIQGFFDIPVDNLFAAPLFARDIQEQYSNRD
                     LMIVSPDVGGVVRARAIASRLNCDLAIIDKRRQRAGHSEVMNVIGDVEGRDCLMIDDI
                     VDSGGTHCNAAFALMEHGARSAGAYVTHGVLSGGAVARVAEAPMEMMTITDSIQATPE
                     VDQARNIRQLTIAPLLAEAMRRISDETSVSSLFD"
     gene            3418..>3612
                     /locus_tag="VHX39_18370"
     CDS             3418..>3612
                     /locus_tag="VHX39_18370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014105362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEX3993142.1"
                     /translation="MSRPPLQPTPPSSTVPQGISSPTALSPGGMPRAPLAPARMPTQL
                     GERRTLVVGRGISVQGTITDA"
BASE COUNT          691 a         1149 c         1103 g          669 t
ORIGIN      
        1 acctccgtca ataatcctcg ctggttcagc gcctctgcca accgcgccat tatttgccgc
       61 tcggcctcgg gttccgcagg cgggccgctc tcctgcttca gcgtgatagt gtcgaaaccc
      121 gcggtaattt cggtaatagc agcatctcgc gccgcggggt cggccagaaa ccagtggcca
      181 ttatgcacca aagccatcgg tgcgtccgag tgcggcccgt actgggctgg cgtcagcaaa
      241 atctcgaacc gtgcgccacg caatcgcgag agttcctgca tgtgccgcaa cagcgcatgg
      301 gtcagagcca tgccgtatct gacccgcgcc ggccgggggg ttagccagat cgaccaggcg
      361 gtgcgttgcg cctcaagatc agcattcacg tgcgactgtg tctcagcact cggcggcggg
      421 ctgtccgcgc cgggatcggc ctttggcagc aacgtcgtcc aattgcggtc caggtcgatg
      481 aacatcgggc ggaacaaagt ggaaagcttg gctttgtaca cctgtccgcc aattccctcg
      541 gtcggaccga tactgtcgtt ggcgcgcagc gcaaaggtcg gcttcggcag caattgaccg
      601 ggccgtggct cgccgagacg aaacgtgttg gccggcacgt cctcggcgaa cgaagcccag
      661 tcgatcacca ggtcagcgtg gcgggagtcg agcagttggt ggagcgcgag atactcctga
      721 tcctgcccgt agccgctact gccgagtgtt accacccgta cgtccggatt gtattgccgt
      781 agcgcccgct gcagcatcag gtccagcgtt tcatccggcg gacacgcgag gcattcgacc
      841 gcggcggctc cggtgaggac cacaatgaaa tcggtcgccc ggaacggatt tgtgggttga
      901 ccgcggtaac cgaacggatt gaacggaccc ttcgtggcgg tggttgtcca gccgctgatc
      961 acaccccgcg ggcggttcag atagcgcatc gccatctcga ccgagcacag ggcgagcaac
     1021 gccatcacga tcccgaacgc gaagcgtaag actggatgat aggagcgctg ggtcaaccgt
     1081 tcacggactc cacgcgatca gggcaccacg gaatggcaat ggccgacccg acgaaggccg
     1141 ccgcagccag tgtgacggcg gaccgggaac gccaaagttt caaatcaacg gagtcggggc
     1201 tggttacagg cagatttccg gtaccgagac agcgagccgg caccgggctt cgtcacgaaa
     1261 gctcgacgtc gtggcagatg cgcaataaac ctgatttctc ccggggccga tttctcctgg
     1321 gtccagtttt cgcctgggtc cggttttctc ctgggcccgg ttttctcctg ggcacggtgg
     1381 cgcaacaggc ggattcctgc ttagaagcgg tcacgccgca gtgtcccgac gagtcgcccc
     1441 tccagccaaa cggcatcgcc catgaagatt gtcgcatgca acagcaatcg cccccttgcg
     1501 gaggcggtcg cgcgcaacct cggcatggcc ctgacccagg cacagatccg ccgcttcgcc
     1561 gatatggaag tgtttgtcga gattctggac aacgtccgcg gcgaggacgt gttcgtcatc
     1621 cagtccacct cattcccggc caacgacaac ctgatggagc tgctgattac gttggacgcg
     1681 ctacggcgct cgtcggcgcg acggatcacc gcagtcgtgc cgtatttcgg ctatgcgcgg
     1741 caggatcgga ggtccggctc ccgcacgccg atcagcgcca agctcgtggc caacctgatc
     1801 accgaggccg gcgctcaccg cgtgctgacc atggacctcc acgccgggca aattcagggt
     1861 ttctttgaca tcccggtcga caatctgttc gccgcgccgc tgttcgcccg cgacatacag
     1921 gagcaatata gtaaccgcga cctgatgatt gtctcgcctg atgttggcgg cgtcgtgcgg
     1981 gcccgtgcca ttgccagccg gctcaactgc gacctcgcga tcatcgacaa gcgccgccag
     2041 cgcgccggtc actccgaggt catgaacgtg atcggcgacg tcgagggccg cgattgcctg
     2101 atgatcgatg acatagtcga ttccggcggc acgcactgca atgcagcttt cgcgctgatg
     2161 gaacatggcg ctcgttcggc cggcgcctat gtcacgcacg gcgtgctgtc cggcggtgcg
     2221 gtcgcgcggg tggcagaggc accgatggaa atgatgacga tcaccgattc gatccaggca
     2281 acgccggagg tcgatcaggc gcgcaacatc aggcaactga ccatcgctcc attactggcc
     2341 gaggcgatgc ggcgaatcag tgacgagacc tcggtcagtt cattgtttga ttgaaccgga
     2401 cgccggtgat gccgattcgg aacttgtaac caaccacctg gagcggcgtc gtactcccga
     2461 tcattggaac gtgagcgcac ttcgttcccc ggtcactgcg gacgtggcaa acaatctcca
     2521 ggccacgcct ggggagatcg cttcgcctgc aatgcctcga cgccgagccc ggtcgatctg
     2581 accagacaac attatggcgc cggtcgtcgt ggtgcgtcaa attcgttatt aaggcgaggc
     2641 cagttcagca ttcccagaag ttaagttcac agcggccccg atgacggttc caggcgtctg
     2701 taagacggat gaaacgattc gccctgccat atgcgcacgc gaatccgcat ggcgagacac
     2761 gtcccaggat gaccccgaat ggcgggtgat aatgggcgaa tgattgggtc tgcgcgcaag
     2821 gacacggacg caacctcccg attcgggaat cgggctggcg cggtttttcg cgtcgcgcgg
     2881 cgtttctcgg gaccggtcgc agcgaacgcg tatgacaatt ttagcgttaa attttcgcct
     2941 gtgcggcgtc attcggacca cgcctcgttg tcggaatgtc cgctatttca ggcatttagg
     3001 ggttattggt ggatgcgttg agcgataaat gacgtggaaa aagcaacgag taagaaaaaa
     3061 gtgaatcact ggcttttttc gcagacaggt tgtgaatcta cgcgacagcg tgttaccagc
     3121 ccgcattgac attgtcgtct ggcaaatggg gtcatcgtgt tcaaacgccg caaacccgaa
     3181 gagccgaccg cgcctctatc gcgcggtcat gtaattgccg ctgggccaga gaacccggta
     3241 ccgcggccag agacgcgggc ggtacccagc tcgccagcga taacaccgac gacaacgacg
     3301 acggctcgcg agcctgaccc cacgatcctc attcccgcaa agccgccgga aattccaacc
     3361 ccaccaccac cgtcgccggt ggcctccgcc ccgccccagc ccaaggaacc gatccccatg
     3421 tctcgtccgc ccttgcagcc aacccctccg tcttcgactg tgccccaggg tatttcctcc
     3481 ccgaccgccc tgtccccggg cggcatgccg cgcgctccgc tggcgccggc ccggatgccc
     3541 acgcaattgg gcgagcggcg gaccctggtg gtcggccgtg gcatcagcgt gcagggcacc
     3601 attacggacg cc
//
LOCUS       DATAVD010000962         3698 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2697289, whole genome shotgun sequence.
ACCESSION   DATAVD010000962 DATAVD010000000
VERSION     DATAVD010000962.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3698
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2697289"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..757)
                     /locus_tag="VHX39_18375"
     CDS             complement(<1..757)
                     /locus_tag="VHX39_18375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing GNAT family
                     N-acetyltransferase"
                     /protein_id="HEX3993143.1"
                     /translation="MLNAIGKGRSDVAEIRDDLNLDSGLMSRLLRSLEDESLIRTTPH
                     PNDARRRVASLTRTGQREFQAYEDLSNARAAALLDRAPRADELLRAMDMIASALGRDR
                     IEIETVDPRQEAARYCLGEYYAELQRRFENGFDVSRSRDPDAADMVRPRGAFLVAISD
                     GLPIGCVGLKGTGGDMAEIKRLWIDGTARGLGIAKRLMQAAETAARELSVKTLRLDTN
                     SALHEAMKLYRESGWVEIDRFNDDPYPDHFFEKH"
     gene            complement(1229..2101)
                     /locus_tag="VHX39_18380"
     CDS             complement(1229..2101)
                     /locus_tag="VHX39_18380"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA family NAD(P)-binding protein"
                     /protein_id="HEX3993144.1"
                     /translation="MFLVTGITGKVGGATAKHLLAHGKKVRALVRNREKAAYWANQGV
                     ELADGDWNDSAAIERALKGVEGAFVMLPAVWAPSPDYKEAKGVIANYVEALTKAAPPR
                     VVALSSMGANRNSGVGMITALSLLEQGFRDLTSPIAFVRAGGFFENFLYGLQVAQGGT
                     LPVYYNPTNRKSTMVATNDIGAEVATLLTGPAWSGQRVVELGSMVTADEVADQLGEVL
                     NLDVKAFAVPRAGWAAAFEQFGIPKGHTGPAEEMFEAVNAGWMDLGAEDTEHVAGTTS
                     ARDVFEAAQNAAKA"
     gene            complement(2145..2567)
                     /locus_tag="VHX39_18385"
     CDS             complement(2145..2567)
                     /locus_tag="VHX39_18385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008892344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX3993145.1"
                     /translation="MSQTMNLHHVPEAITLHRAPWAGRIMSAVVVVALVADGTIQLFA
                     PAQIASMLHETGFAMDLTRVVGPIVLLSAILYAIPATAVLGAILVTGFLGGAICAHVR
                     IGELGTPPEIVSLLLGAMTWGGLYAREPRIRAILPLVR"
     gene            2686..3591
                     /locus_tag="VHX39_18390"
     CDS             2686..3591
                     /locus_tag="VHX39_18390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008892342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3993146.1"
                     /translation="MQNLEPIRIFITVAEMGSFTLAADSLGIQKGRASTAVRKLEEDV
                     GVRLLHRTTRSVQLTEDGRAFHARARDLLAEVDDLHSMFASDRVALRGRLRVDLPTEV
                     ARMTIVPALPDFMATHPELELEVSSTDRQVDLVQEGFDCVLRLGPISDETLIARPLGL
                     LRMVNAASPAYLARYGIPRSLEDLQRQEHRTIHFSTMLGARPIGWEYPDGDSYATLQL
                     PGALHVNSAQTYEAAALAGLGLIQAPLLGIGRYLESGALVEIMPDLRRRALDVSLVVA
                     HRSNLSRRVRAFMTWIEDVLTPYLE"
BASE COUNT          687 a         1052 c         1173 g          786 t
ORIGIN      
        1 ggtgcttttc gaagaaatgg tcgggatacg ggtcgtcgtt gaagcggtcg atctcgaccc
       61 agcctgattc gcggtagagt ttcatggcct cgtgcagggc gctgttggtg tcgaggcgta
      121 gggtctttac cgacaattcg cgggccgcgg tttcggcggc ttgcatcagg cgcttggcga
      181 tgccgaggcc tcgggcggtt ccgtcgatcc atagccgctt gatttccgcc atgtcgccgc
      241 cggttccctt caggccgaca cagccaatgg gcaggccgtc ggatatcgcg acgaggaacg
      301 cgccgcgcgg ccgcaccatg tccgcggcgt cgggatcgcg ggagcgggat acatcgaagc
      361 cgttttcgaa gcggcgttgc agttcggcgt agtattcgcc gaggcaatag cgggcggctt
      421 cctgcctcgg gtcgactgtt tctatttcga tccggtcgcg gccgagggcg gaggcgatca
      481 tgtccatggc gcgaaggagt tcgtccgctc gtggggcgcg gtccagcaat gcggcggccc
      541 tggcgttgga gaggtcctcg taggcttgga attcacgctg gcccgtcctg gtgaggctgg
      601 cgacgcgacg gcgggcgtcg ttgggatgcg gcgtggtgcg gatcagactt tcgtcctcaa
      661 ggcttcggag caaacggctc atcaggccgg agtcgaggtt gaggtcgtcg cggatttcgg
      721 ccacgtcgga acgtcccttg ccgatggcgt tcaacacgcg ggcggcaccg agcgggcggc
      781 ctcggccgag gaaggatgtg tctagtgcgc cgacttcgat tgtgaccgca cgggcgaagc
      841 ggcggaattg ggctatgggg tcgcggggca tgttgtctga cttaggtcag ataaatttgg
      901 gagtcaatcg acgtgcgggg ttttgctcga caagaagcca tcgaaatcag aagaaagggt
      961 tgagcctgac cgatgttttt ggcgtttcgg tcatattttt gaaagccgtg atttattgat
     1021 aaatttggtt ctaatgcagc ttgcaagagt ctttcgcacg accgaatgca tgcaacatga
     1081 aacagaagct gctaaatcca tccggatgtt cagaaggtca ggcaagagtg gaggtgcttc
     1141 gcgttacttt gaactgttga gcgctttccg tgacgcgtcc gacacagaag cgggcagtct
     1201 ccgtctcatg cctgatccgt cctgggactt acgccttggc ggcgttctgt gcagcttcga
     1261 atacatcgcg tgcggacgtc gtacccgcta cgtgctccgt atcctcggct ccgaggtcca
     1321 tccatcctgc attcacggcc tcaaacattt cttcggcagg tccggtgtgg cctttcggga
     1381 taccgaattg ctcgaacgct gctgcccacc ccgcacgcgg gactgcaaag gctttcacgt
     1441 cgagattcag gacttcaccc aattggtccg cgacttcatc cgcggtgacc atcgaaccaa
     1501 gctcgacgac gcgctgtcct gaccacgctg ggccggtcaa aagggttgcg acttccgcgc
     1561 cgatgtcgtt cgttgcgacc atggtcgatt tccggtttgt cggattgtag tagaccggta
     1621 gcgttccgcc ctgggcgacc tgcaagccgt aaaggaagtt ctcgaagaaa ccacccgcgc
     1681 gcacaaatgc gattggagat gtcaggtcgc gaaagccttg ctccagcagc gacaaggccg
     1741 tgatcatccc gacaccgctg tttctgttcg cacccatcga cgaaagcgca accacgcgcg
     1801 gcggtgctgc cttggtgagt gcctcgacat agtttgcaat cacgcccttg gcttctttgt
     1861 aatcgggcga gggcgcccag acagcaggca acatgacgaa cgcgccttcg acgcctttga
     1921 gtgctcgctc gatggctgcc gagtcattcc aatcgccgtc tgccagttcc acgccctggt
     1981 tcgcccagta agccgccttc tcgcggttgc ggacgagcgc gcgtactttt ttgccgtgcg
     2041 ccaacaggtg tttcgcggtt gcgccgccca cttttccggt gattcccgtt actaaaaaca
     2101 tatgttttct cctgattgag gaacagagta ctgcctttgt tggttcaacg gaccagcggc
     2161 agaatggccc ggatacgggg ttcgcgcgcg tagaggccgc cccatgtcat cgcgcccaga
     2221 agcagggaaa cgatttccgg cggcgttccc aactcaccga tgcggacatg ggcgcagatg
     2281 gcgcctccca aaaagcccgt caccaggatc gcgccgagga cggcggttgc cgggatggcg
     2341 taaaggatgg cggagaggag tacgatcgga cccacgacgc gggtcaggtc catcgcgaac
     2401 ccggtttcgt gcaacatgct cgcgatttgt gccggtgcga aaagctgaat agtgccgtct
     2461 gccaccagag cgacaacgac aaccgcgctc attatccggc cggcccacgg ggcgcgatgc
     2521 aaggtgatgg cttcaggcac gtgatgcagg ttcatggttt gggacacttg tcgttctccg
     2581 atggggtcgc ctgagttcga ggcttactgt gtctcccgaa tatgataaat accgatataa
     2641 tgaacgcact gttccctttg tggtgaacaa taccgaggca cgaaaatgca gaatctggaa
     2701 cccatccgca tattcataac ggtggcggaa atggggagct ttaccctcgc ggccgatagc
     2761 ctgggcatcc aaaaggggag ggcttcaacg gccgtccgga agctggaaga agatgtcggc
     2821 gtcaggctcc tgcaccggac gacgcgcagc gtgcagttga cggaggacgg gcgcgcattt
     2881 catgcccgtg cccgcgatct gcttgctgaa gtcgatgatc tgcactcaat gttcgccagc
     2941 gatcgcgtgg cacttcgcgg gcgtttgcgg gtcgatcttc cgaccgaggt ggcgcgcatg
     3001 acgatcgttc cggcgttgcc ggatttcatg gcgactcacc ccgagttgga gctggaggtg
     3061 tcgagtacgg atcggcaggt cgatctggtt caagagggat tcgactgcgt attgcggctt
     3121 ggacccatca gcgacgagac gctgattgcc cgcccactgg gcctgttgcg catggtcaac
     3181 gctgccagtc ccgcctatct ggcgcgctat ggcatccctc gatcgctgga agatctccag
     3241 cgtcaggaac atcggacaat tcatttttcg acgatgctgg gcgcaagacc cattggatgg
     3301 gaatatccgg acggcgacag ctacgcgacg cttcagttgc caggtgcgct gcacgtcaac
     3361 agtgcgcaga cctacgaagc cgctgccctc gccggccttg gcctgattca ggcgccactc
     3421 ctggggattg gccgatactt ggagagtgga gcgcttgtgg agatcatgcc cgatcttcgt
     3481 cgccgggcgc tcgacgtgtc actcgtcgtt gcccatcgca gcaatctgtc gcgccgggtc
     3541 cgcgccttca tgacatggat cgaagatgtg ctgacgccgt atctggaata gcgagacgaa
     3601 ttgcttcgtc cggccctcga aatcaacatt ggacagattg ctccgatgtg ctacgacgag
     3661 ggacacggcg agcgcccggc ggcgaaaatc gggtatga
//
LOCUS       DATAVD010000963         3538 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2697336, whole genome shotgun sequence.
ACCESSION   DATAVD010000963 DATAVD010000000
VERSION     DATAVD010000963.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3538
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2697336"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            80..1321
                     /locus_tag="VHX39_18395"
     CDS             80..1321
                     /locus_tag="VHX39_18395"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3993147.1"
                     /translation="MHMMYFTEQPMAAYDAKAGLDFGATALNFSNSYYDSVAGSRLYN
                     EYLEDYIFAEECGADGIMLNEHHNAPFCMQAKTNIFAAILAATTKRVKIVILGNPLPL
                     CDNPIRMAEELAMIDMISKGRLVPGFVRGGGQEQLASGVNPAFNRERFIEAHDLIQKI
                     WTEPGPFRWEGTHYQHRVVNPWAVPLQKPYPRVWVPGVLSKETIIWTAQNRYPYIALN
                     TAIDHTKEIFKLYSETAAENGYVAGPENFGYLIRVHVQDTEEKALENARQFMWMQGEF
                     TGLAHPVWANPSGYFSPSGRRGFVEFATGRAKNPRGAPTFEDQLASTMIVAGTPKQVI
                     EKLKYIVENTRPGIMGIWGNDGTVSATDRKRCIELLFKEVVPEIKDYGAKLGLKDPWE
                     ANAPVHLRYSTDLTTQKAAAE"
     gene            complement(1409..1945)
                     /locus_tag="VHX39_18400"
     CDS             complement(1409..1945)
                     /locus_tag="VHX39_18400"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: protein motif:HMM:NF007479.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019380 - 3-phenylpropionate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate/cinnamic acid dioxygenase
                     subunit beta"
                     /protein_id="HEX3993148.1"
                     /translation="MPDDGLIREIEQFVFYEARLLDSGQFHEWLGLFTDDVHYWMSGR
                     SNRYPRSSKAITMLDPHRYDAAEADQRGLFDEDIKTLTARVARLDTGMAWAEDPPSWT
                     RHLFTNIEVAPGDSESEVTVFCNFLVYRSRGEREQDFYVGAREDLLRRVNGGWKIARR
                     GLTLDQNVLTAKNLSIFF"
     gene            complement(1938..3236)
                     /locus_tag="VHX39_18405"
     CDS             complement(1938..3236)
                     /locus_tag="VHX39_18405"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX3993149.1"
                     /translation="MATDVSQLVDAGNGMISRRIFIEPEIYEAEQRQIFARCWLFLCH
                     DSQVSRPGDFLTTYMGEDPVLVVRDTAGTVRAFLNVCRHRGNRLCRADDGNAASFICA
                     YHGWTFGNDGRLTGVPNQREAYHGALNRDDWGLVPVAQLSNYKGLWFASFDPKAPSLR
                     DYLGEMAWYIDTFVDRREGGIEILATHKWVMPCNWKFPAENFGGDAYHVQWNHLSAVK
                     VAFSRGATASANNQGRMVSPGNGHALICIGPDEVGDAPMPEIENYEKAIAAEVRERLG
                     PRAGLINPIVGTVFPNFSLLRGTSRTFRVWQPRGPEKTEVWSFVFMDAAAPAEVKQAI
                     RKAGIRGFSPSGSFEQDDMDNWQECTQTCRGVMSRQMPLNTQMGLGHDHFDPALGSWV
                     SDYRFSESNHRQFYNRWGDLMGASGWDALEPAPVREAVHA"
     gene            3352..>3538
                     /locus_tag="VHX39_18410"
     CDS             3352..>3538
                     /locus_tag="VHX39_18410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993150.1"
                     /translation="MDEDFRKAALDYHRYPRPGKLAIEATKRMTTQRDLALAYSPGVA
                     AACEAIKADPDTARDYTA"
BASE COUNT          755 a         1187 c          945 g          651 t
ORIGIN      
        1 cgccgagatg gaaaaaccgg ccgaggttgc taaacttgtc accgacttca tcaacgccgc
       61 ctgaaggagg acctccgtca tgcatatgat gtatttcacc gagcagccga tggccgccta
      121 cgacgccaag gctggcctcg atttcggcgc caccgcgctc aacttctcca acagctacta
      181 cgactcggtc gccggcagcc ggctgtataa cgagtacctg gaagactaca tcttcgccga
      241 ggaatgtggc gccgacggca tcatgctcaa cgagcatcac aacgcgccgt tctgcatgca
      301 ggcgaaaacc aacattttcg ccgccatcct cgccgcgacg acaaagcggg tgaagatcgt
      361 catcctcggc aacccgttgc cgttgtgtga caacccgatt cgcatggccg aggaactggc
      421 catgatcgac atgatctcca aaggccgcct tgttccgggc ttcgtgcgcg gtggtggcca
      481 ggagcaactc gcctccggcg taaatcccgc cttcaatcgc gagcgcttca tcgaagcgca
      541 cgacctgatc cagaaaatct ggaccgagcc cggcccgttc cgctgggaag gcacccacta
      601 ccagcaccgc gtcgtcaatc cctgggccgt tcctttgcag aaaccatatc cgagggtctg
      661 ggtccccggt gtgctttcaa aagaaaccat catctggacc gcccaaaacc gctacccgta
      721 catcgccctg aacactgcga tcgaccatac caaggagatc ttcaagcttt actcggagac
      781 cgccgcggag aacggttacg ttgccggtcc agaaaatttc ggctatctca tccgcgtcca
      841 tgtccaggac accgaagaaa aagccttgga aaacgcccgc cagttcatgt ggatgcaagg
      901 cgagttcacc ggccttgcgc atcccgtctg ggccaatccg tcgggctatt tctcaccctc
      961 cggccgccgc ggtttcgtcg aattcgccac cgggcgcgcc aaaaatccgc gcggtgcacc
     1021 gaccttcgag gatcagctcg ccagcaccat gatcgtcgcc ggcacaccga agcaggtgat
     1081 cgaaaaactg aaatacatcg tcgagaacac gcgtcccggc atcatgggca tctggggcaa
     1141 cgacggcacg gtcagcgcca cagaccgcaa acgctgcatc gaactgctgt tcaaggaagt
     1201 cgtgcccgaa atcaaagact acggcgccaa actgggcttg aaggatccat gggaagccaa
     1261 cgcgccggtg cacctgcgct attccaccga tctgacaacg caaaaggccg ccgcggaata
     1321 gacgcgcccc gtcatccccg gacttgttcc ggggacctga cgcggcactg agttggtgca
     1381 ggtcccccgg accagccggg ggattgtttc agaaaaaaat actcaaattc ttcgccgtca
     1441 gcacgttttg atccagcgtc aacccgcggc gcgcgatctt ccacccaccg ttgactcttc
     1501 gcagcaaatc ctcgcgcgcg cccacataga aatcctgctc tctctcccct cggctgcggt
     1561 aaaccaggaa gttgcagaac accgtcacct cggactccga atcaccgggc gccacctcga
     1621 tgttcgtgaa caagtgacgc gtccatgacg gcgggtcctc ggcccaggcc atgccggtat
     1681 ccaagcgggc gacgcgcgcg gtcagggttt tgatgtcttc gtcaaacagg cctcgctgat
     1741 ccgcctctgc agcatcgtaa cgatgcggat cgagcatggt gatcgccttg ctcgaccgag
     1801 ggtaacgatt gctccgcccg gacatccaat aatgcacatc gtcggtgaac aacccaagcc
     1861 attcgtgaaa ctgtccgctg tcgagcagcc gagcttcgta aaacacaaac tgctcgatct
     1921 cgcggatcag accgtcgtca ggcatgcacc gcctcccgta ccggcgcagg ctcgagtgca
     1981 tcccagccag aagcgcccat caaatccccc caccgattgt aaaactgccg gtggttgctc
     2041 tcgctgaacc ggtaatcgct gacccaggag cccagtgcag gatcgaaatg atcgtgtccc
     2101 agacccattt gcgtgttcag cggcatctgc cgcgacatca ccccacgaca ggtctgggtg
     2161 cattcctgcc agttatccat atcgtcctgc tcgaacgagc ccgaagggct gaaccctctg
     2221 atccccgcct tgcggatcgc ctgtttcacc tccgcaggtg ccgccgcatc catgaatacg
     2281 aacgaccaca cctcggtttt ctccgggcca cgcggctgcc acacccgaaa cgtccgcgac
     2341 gtgccgcgca acagggagaa attcggaaac accgtcccca caatcggatt gatcaacccg
     2401 gcgcgcggcc ccagacgttc ccgcacctcc gccgcgatcg ccttttcata attctcgatt
     2461 tccggcattg gcgcgtcgcc aacctcgtcc ggaccgatgc aaatcaacgc atgcccattg
     2521 ccaggtgaga ccatgcgtcc ctgattgttc gcgctcgcgg tcgcgccgcg actgaacgcg
     2581 accttgaccg ccgacagatg attccattga acgtggtaag catcgccgcc aaaattctcc
     2641 gccgggaact tccagttgca cggcatgacc catttatggg tggccaggat ttcgatcccg
     2701 ccctcccggc gatcgacaaa cgtatcgata taccacgcca tctcgccaag atagtctcgt
     2761 aatgacggcg ccttcggatc gaacgaggcg aaccacagtc ccttgtagtt cgacaactgt
     2821 gccaccggca ccagacccca gtcgtcgcgg tttagtgcac cgtgatacgc ctcccgctgg
     2881 ttcggaaccc cggtcagccg cccgtcattg ccgaaggtcc aaccgtggta ggcgcagata
     2941 aagctcgccg cattaccgtc atcggcgcgg cacaaccggt tgccgcgatg gcggcagaca
     3001 ttgaggaagg cgcgtaccgt gccggctgtg tcgcgcacca ccagcaccgg gtcctcgccc
     3061 atataggtgg tcaggaaatc gcccggccgt gaaacctggc tatcgtgaca caggaacaac
     3121 cagcatcggg cgaatatttg ccgctgctcg gcttcataaa tctccggttc gatgaagata
     3181 cgccggctga tcattccgtt gccggcgtcg acgagttggc tgacatcggt ggccatgcaa
     3241 tgttccccct gggtgaacgc catgggaaca ttaggcactg tccagatcgc ccggcaatgg
     3301 gctacgcggc tttgagttgc atccgtgtca ttggccagcc atacagcctc aatggacgag
     3361 gatttccgca aggctgcgct cgactaccac cgctatccgc ggcccggcaa gctcgcgatt
     3421 gaggccacca agcggatgac aacccagcgc gatctggcgc tggcttattc ccctggcgtt
     3481 gcggcagcct gtgaggcaat caaagccgat cccgacacgg cgcgagatta caccgccc
//
LOCUS       DATAVD010000964         3073 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_93751, whole genome shotgun sequence.
ACCESSION   DATAVD010000964 DATAVD010000000
VERSION     DATAVD010000964.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3073
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93751"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(230..1093)
                     /locus_tag="VHX39_18415"
     CDS             complement(230..1093)
                     /locus_tag="VHX39_18415"
                     /inference="COORDINATES: protein motif:HMM:NF028434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HEX3993151.1"
                     /translation="MSRVLLPIPSRDFDPSEVAVSWKMLTQRGHQVVFATSDGKPGAC
                     DPIMLSGIGLDPWSGIPVLRNIRVLGLVLGANADARNAYAKMLRDPAFENPMRWDRIE
                     SRDFDGLLLGGGHRARGMREYLESGVLQRITTEFFADEKPVAAICHGVLLAARSKRVD
                     GRSVLYGRKTTALPWALERKGSALAHVGRFWDRNYYRTYIEATGQPAGYMSVQQEVTR
                     ALARPADFIDVPASDPEFKRKTSGTARDTATNDRPAWVVRDENYVSARWPGDTHSFAQ
                     TFAEVLEAKAS"
     gene            complement(1185..2219)
                     /locus_tag="VHX39_18420"
     CDS             complement(1185..2219)
                     /locus_tag="VHX39_18420"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3993152.1"
                     /translation="MKLFSSLATLSLGAILMTQAAHAAPDAGTDPRIDPQVRAFLREI
                     NKDPSPFWELPQPRPQEILTALQNKTPVDMSGVNTTEQTITQDGQAVKIYIMKPAQVT
                     GKPGVLLFIHGGVWIVGNFQNHQRLLRDLVVGSGQIGVFVEYTSLPQARFPTQLDQSY
                     AVLEWVASHAEEFGADGSRIAVAGNSVGGNMTAALTLMAKDRGGPKISYQVMMIPATD
                     ASVDTASYHEYGTGRFLARAFMKYGWDLYAPDAATRNNPYVSPLRASLQQLKGLPPAL
                     VITSENDPLRDEGEAYARKLKEAGVSVIATRYNGMIHDFVLLNGILSDPEPEAAIRQI
                     SAEIKAHLAP"
     gene            complement(2320..>3073)
                     /locus_tag="VHX39_18425"
     CDS             complement(2320..>3073)
                     /locus_tag="VHX39_18425"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HEX3993153.1"
                     /translation="SSGASFLLAMLQIARGISAIGAGRHWEAYEHLRRLFAPADPAFN
                     SGLQFFALADFAEAAVYSGNAEAASGLIDEVERVSAPVPVPWVGTMLQYGKALLAAPE
                     DAEQFFLQGLGPAAKKWPFLRARLLLAYGGWLRRQRRSANARAPLREARDIFDALGAS
                     PWSSRAREELRASGETSRRRTEQVWETLTPQELHIAQLAVEGLSNKEIGARLYLSHRT
                     VGYHLHRIFSKAGITSRSGLRPILTSISHPAS"
BASE COUNT          558 a          944 c          988 g          583 t
ORIGIN      
        1 cctttggaac aagtccagct gggtccggat tgaatgcagc aggaccagcg ccgggccctg
       61 gcccgtgcgc aggtagcgca cctttggacc gccgggcgtc aacgacagaa actccggctt
      121 ctgatcggga gaccagcgaa gcgtatattc aacaccattt tgaccaacca tgaccttccc
      181 cgttcgtatg tcagaagccg aattgacggt gctgcatcat cgtgatcggt cacgatgcct
      241 ttgcctcgag tacctcggcg aaagtttggg caaagctgtg ggtgtcgccg ggccagcgtg
      301 ccgagacata attttcatcc cgcaccaccc aggccgggcg atcgttcgtc gccgtgtcgc
      361 gcgctgtgcc gctggtcttg cgcttgaact cggggtcgct cgcgggaacg tcgatgaaat
      421 ccgctggcct ggcgagtgcg cgcgtaactt cctgctgcac ggacatgtat cccgcgggtt
      481 gcccggtcgc ctcaatgtag gtgcgataat agttgcggtc ccagaagcgc ccgacatgag
      541 cgagcgcgct gcccttgcgt tccagcgccc agggcaacgc cgtggttttt cttccgtaca
      601 gcacggaccg gccgtcgacc cgcttgctgc gggcggccag cagcacgcca tgacagatcg
      661 cggccaccgg cttttcgtcg gcgaagaact cggtggtgat ccgttgaaga acgccactct
      721 caagatattc gcgcatgccg cgcgcccggt gtccgccgcc cagcagcaag ccgtcgaagt
      781 ccctggactc gatccgatcc cagcgcatcg ggttttcaaa tgccggatcg cgcaacattt
      841 tggcgtaggc gttccgcgcg tcggcattgg cgccgagcac gagccccagg acacggatgt
      901 tgcgaagcac cgggatgccg ctccaggggt cgagcccgat accggaaagc atgatcgggt
      961 cgcaggcccc gggcttgccg tcggacgtcg caaacacgac ctgatgcccg cgctgcgtca
     1021 acatcttcca actcaccgcg acttccgaag ggtcgaaatc gcggctgggg atcggtagca
     1081 gaacgcggct catggcgaga cttccttcga cgagacttcc ttcgatgcag gccgttgatt
     1141 tgaggcggcg accatgttgc cgcctcaaat tgcaaaactc cggatcaggg cgccagatgt
     1201 gccttgatct ccgccgagat ctgacggatc gcggcctcgg gctcgggatc gctcaggatg
     1261 ccgtttagca ggacgaagtc gtggatcatc ccgttgtagc gggtagcgat caccgacact
     1321 ccggcctcct tgagcttgcg ggcgtaggcc tcgccttcgt cgcgcaacgg gtcgttctcg
     1381 gaggtgatga ccagggccgg cggaagtccc tttagctgct gaagactggc gcgcagcggc
     1441 gagacgtacg ggttgttgcg cgttgccgcg tctggtgcgt acaggtccca gccgtacttc
     1501 atgaaggcgc gggccaggaa tcgccccgtg ccgtattcat gataggacgc ggtgtccacg
     1561 ctggcgtcgg tcgccgggat catcatgacc tggtagctga tcttgggacc gccgcggtct
     1621 ttggccatga gcgtcagcgc cgcggtcatg ttgccgccaa ccgagttgcc ggccactgcg
     1681 atccggctgc catccgcgcc gaactcttcg gcgtggctcg ccacccactc cagcacggca
     1741 taggattgat cgagctgagt ggggaagcgc gcctggggta acgaggtgta ttcgacgaat
     1801 acgccgatct ggcccgagcc gaccaccagg tcccgcagca ggcgctgatg gttctggaag
     1861 ttcccgacga tccagacgcc gccgtgaatg aagagcagca cgccgggttt accggtaacc
     1921 tgcgcgggct tcatgatata gatcttcacg gcttgaccat cctgggtgat ggtctgctcg
     1981 gtcgtattca ctcctgacat atcgaccgga gtcttgttct gaagcgctgt caggatctct
     2041 tgcggcctcg gttgcgggag ttcccagaat gggctcggat ccttgttgat ctcgcgcagg
     2101 aaggcgcgaa cctgaggatc gatccggggg tcggtgccgg cgtccggagc cgcatgggcg
     2161 gcttgggtca tgaggattgc tccgaggctg agggttgcga gcgaggaaaa gagtttcatg
     2221 gtcaacttcg tttcaagggg ttacacgcag ccgtacaggt agcctgcggg gaggggcggc
     2281 cgcttctgtc aaatgaccag tccggtgaca gatcggcggt cagcttgcgg ggtggctgat
     2341 gctggtgaga atggggcgta gtccggaccg cgaggtgatt ccggctttcg aaaagatccg
     2401 gtgcaggtga tagccgacgg ttctgtgaga cagatagagt ctggcgccga tttccttgtt
     2461 tgaaagacct tcgacggcga gttgcgcgat gtgtagctcc tgcggggtca gcgtttccca
     2521 cacctgctcg gttcgccgac ggctggtttc tcccgaagca cgtaattcct cccgggcacg
     2581 gctgctccag ggcgaagcgc cgagcgcatc gaagatgtca cgtgcctcac gcaacggcgc
     2641 cctcgcattg gcagacctgc gctggcggcg cagccacccg ccataagcaa ggagcaaacg
     2701 ggcacgcaaa aacggccact tcttcgccgc cggcccaaga ccttgcagga agaactgttc
     2761 ggcatcttcc ggcgccgcga gcagcgcctt gccatattgc agcatcgtcc caacccacgg
     2821 cacgggcacc ggagccgaga cgcgttccac ctcatcgatg aggccgctgg cagcctccgc
     2881 attgccggaa taaacggcgg cttccgcgaa atccgcgagc gcgaagaact gaagaccgga
     2941 attgaaggcc ggatcggcgg gcgcgaaaag gcgtcgcaaa tgctcgtagg cctcccaatg
     3001 ccgacccgcg ccgattgccg agatgcctcg cgcaatctgc aacatcgcca gcaagaaact
     3061 ggcgccgctg gac
//
LOCUS       DATAVD010000965         9834 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1767174, whole genome shotgun sequence.
ACCESSION   DATAVD010000965 DATAVD010000000
VERSION     DATAVD010000965.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9834
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1767174"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            550..1029
                     /locus_tag="VHX39_18430"
     CDS             550..1029
                     /locus_tag="VHX39_18430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993154.1"
                     /translation="MSRTDVFALRNTGLNLFLFAEVGIECNGSMLTVLSVLARLGEDP
                     WAQAAHWVNLPRPDIIDRLAHSIAQMPLPPRALRDARQTATRLSELLPTQVIKLSQTN
                     AATPTALTWPRWAPVAVIVIMLAFALGSTLLTAPNTKGAALTPFAQTEPVPTSAPSN"
     gene            1195..1665
                     /locus_tag="VHX39_18435"
     CDS             1195..1665
                     /locus_tag="VHX39_18435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993155.1"
                     /translation="MIDDNPSQPEADSFRGFESAFKAAATQLKEDAKLATVALRQGQV
                     ETLSQYKMSDSEWEGLLSAARKAAQHGEKQHLLLRFPSGLCTDDSRAINNPPNDTWPE
                     TLRGEAAEIYQRWHETLKSRGFELTASVLNFPGGQPGDVGLFLRWGEDRTPDSK"
     gene            complement(1870..9795)
                     /locus_tag="VHX39_18440"
     CDS             complement(1870..9795)
                     /locus_tag="VHX39_18440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucoamylase family protein"
                     /protein_id="HEX3993156.1"
                     /translation="MPTAFSAQLVRRLREEDPGVAPALRWLDKALASQATTTGRIVDI
                     QQQREGAANVTIRNVITSMRQISSIDWRELFESVSPVDAVLRDGSDFASQDFATRELY
                     RHAIEAIARGSCRPETEIAACAVAAARTAATGRAADPGYYLIARGRPGFEAEVNCRPT
                     IRSRLLRANETVGIAGYGVVVVAIATVILGLVAGWTLQDGSMRNLAELVLFGLIPASD
                     AAMALTNYAATNRFSATRLPGLELEGGVPPTLRTLVAMPTMLTSLAEIAELVRHLEVH
                     HLANSDDELSFALVSDWADAATETMPGDDALLQAATDGVAALNARYGPAPGASRFLLL
                     HRRRQWNPAEGKWIGWERKRGKLHELNRLLRGAGDTSFVPSPNQPPVGVRYVIVLDAD
                     TRLPRDTARRLVGKMAHPLNQPDLDAGTGRVVDGYAVLQPRVTPALPTGRDGSVFQRL
                     FANASGMDPYACVVSDVYQDLFGEGSYCGKGIYDVDMFEAAMKGRISDNTVLSHDLLE
                     GTFGRAGLISDIELIDEFPARYDVAVSRQYRWARGDWQLLPWILGRRSMPLVGRWKML
                     DNLRRSLSAPAAFAALVIGWTLPFADPPRWTVSVLAAIAIQALIPFVTGILPRRRGLA
                     RLMHLRAVAEDLQLALSQIILLVAFLPHQAWVMGQAIVLTLYRLLITRRHLLEWVTAS
                     QAKISPSLSLIGFYRGMAGGIALTIGAAVLLICCPAAVWPIGTPFIVLWLLSPVVARW
                     ISKPSPPSGIRPAAAEDIHALRLIARRTWRFFEIFVTVEDNMLPPDNFQEDPKPVVAH
                     RTSPTNIGLYLLSASAAADFGWITILEATERLEATFASMTKMERHLGHFYNWYGTLDL
                     RPLEPRYISSVDSGNLAGHLIALWNACAEMAEQPLIAANWRMGIGDPLALLLEAIHDV
                     GEDLRAPDWQNLVAVLKGLTSALEPDTTRLGPETPDTIAAELEWLMPPVENIPALVRQ
                     LCAGQAGNPGFRRDGPIWADAMLAAARGQQRNLAVLAPWAMLVPALAARMPTLAELPA
                     LCACAIATGENVEFVQALEDSARRATDLSVRLQALGKAARGFFDEMNFSILFDSSREL
                     LSIGYRVGDGSLDPNDYDLLASEARLTSFIAIAKGDLPTRHWFRLGRAMIPVGSEAAL
                     VSWSGSMFEYLMPSLVMRAPNGSLLERSNQEVVRQQIKYGAARDVPWGASESAYNARD
                     LEFTYQYSSFGVPSLGLKRGVGDSTVIAPYATALAAMIDPGAAAANFARMADAGGRGQ
                     YGWYEALDYTKSRLPAGTSVAVVRAFMAHHQGMTVLAIAETIGGGAMRRRFHTEPMVQ
                     ATELLLQERIPHDVAIAKPMIQVPQAATSASDYLTSIQRRYDNPHAFSPRTHLMSNGR
                     YAVMLTSAGSGYSRWRDIAVTRWQEDVTRDSWGSYVLLRDRASGTVWSAGYQSSGVEP
                     GHYDVVFSEGRAEITRRDGMTTTRMEVAVSSEDDAEVRRISVTNHGPRSRDIEITSYA
                     ELVLAPQAADDAHPVFSKMFVETAFEAGALLATRRRRSGNEPEVWAAHLAVTEGETVG
                     DPQFETDRARFLGRGRTIRAPIALATLTPLSGTTGTVLDPVFSLRRLMRIPPGKTVRI
                     AFWTMVAGSRGAVLDMVGRHQDAMAFDRATMLAWTQAQVQLRHLGLDSEDANVFQRIA
                     SRAIYADATLRPANATLQRGDGAASLLWQHGISGDLPIVLVAVAQDSDLDLVRRLLLG
                     HEYWLTKHISVDLVILNTQPTSYAQEFQRAIQVLVDANRLPPGLATTPGKGATFVLRA
                     DLVSETVRNLLFASARAVFFGHRGSLSEQLARALQPDSVPPPPRRVAAASEPRNDRRL
                     PALAFANGFGGFADDGREYVIVLDDGQVTPAPWINVIANDMFGFHVSAEGSGSTWSLN
                     SQQNHLTPWSNDPVSDPPGEVIYVRDEDTGELWGPTALPIRQPGARHVARHGQGYSRF
                     EHTSHGIALDLLQFVPVDDPVKISRLTVTNQSGRPRRLSVTVYVEWVLGATRATAPFI
                     VTSMDPETGALFARCPWNTTFGQRVAFADLSGRQTSWSGDRRTFIGRNGMLDNPLALA
                     AGAPLGNVVGAGLDPCGALQTGLVLPPGGTAEVVLLLGQTETLPEARAVIARQRAADV
                     TASLAAVTRFWDDTLGTVQVRTPDPALDIMLNRWLLYQTLSCRVWARAAFYQASGAYG
                     FRDQLQDVMALCLSRPALARAQLLRAASRQFLEGDVQHWWLAESGLGIRTRISDDRIW
                     FGFVVMHYVTVTGDTAVLLEEVPFLEGPALADHQGEAFFSPVISDRHATLFEHCALAL
                     DHSLAVGIHGLPLMGTGDWNDGMNQVGEQGKGESIWVGWLLVATLTAFADLAESTRAA
                     TWRHHAAALREALERDGWDGDWYRRAFFDDGTPLGSAQNDECRIDSIAQSWSVISGAA
                     DPARAVRAMAAVDRALVRHDDALVLLFAPPFDKTALQPGYIKGYPPGIRENGGQYTHG
                     AIWSIIAFAMLGDGDKAGALLSLINPINHALSADAARRYAVEPYAIAADVYSVPPHVG
                     RGGWTWYTGSAGWMYRAGVERILGLRVQGAELVLDPCIPRAWPGFDLTFRHGTAQYEI
                     RVENPSGVSRGVAHAELDGTALTGNKVCFTLVDDGKLHKLLVTLG"
BASE COUNT         1885 a         3209 c         3046 g         1694 t
ORIGIN      
        1 tacttctagg tcgaccactt cgaacagcgt ggcaatgaac ctcgcccgtg ttttgacgtc
       61 gttgcccccg atgttccgaa ttggcccgac ctggtcattg ccatcgtttt gtaggctgcc
      121 aacgctcgtc gagccaccca gaagctcccg aagacaaacc caggacgggt tactcgttcc
      181 atgttccgga agtcgtgctc aacgacatta ttcgggtatt tcacctgtcg cagccgtgac
      241 cagcgccaca gttagccgtc cttcttcatc tcggccgccg ccttcgatag gccgcatttc
      301 tgtccaccgt gatggtccgc gggtttacca tgcgtggctg cgccaacgcc ttgcggaaaa
      361 accgtttcgc cgctcggcgt cgcgcttggc tgacaacaga aagccaacgg tctggccacg
      421 gctgtggacc gctcagcaag tcatgcggcc tgggtaattt ccgatgcttt gcccgtaatc
      481 aagcggtccc tatagtgtca agaggctccc cggaagcgcc ccaaccatca ataatggcag
      541 gattgcagca tgagccgaac agatgtattt gcgttgagga acactggcct gaacttattt
      601 ctcttcgccg aggtgggcat cgagtgcaat ggatcgatgc tcaccgttct ttctgtcctc
      661 gctcgtctgg gggaggaccc ctgggcacaa gctgcacact gggtgaactt gcccaggccg
      721 gacattattg accgcctggc ccatagcatc gcacagatgc ctctgccgcc gcgggcactt
      781 cgtgatgccc gtcaaacagc cactcggcta agtgagttgt tgccgacaca agtaatcaaa
      841 ctcagccaaa cgaacgccgc aacacccact gctttgacat ggccacgatg ggcaccggtg
      901 gccgtgatcg tcatcatgct ggcttttgcc ctcgggagca cattgctcac tgcaccgaat
      961 acgaaaggtg ccgccctgac gccattcgct caaaccgaac ctgtgcccac cagcgcgcca
     1021 tccaattgaa ggccaattcg ttgtataagt agatgatgga cgcagtgagg aaaaccatcg
     1081 gcattgacgg acgtaccggc gtggacggga ggcttacgtt aggtagaagt cctgtcacgc
     1141 ctgaaagggc cgctgcattt ggttgcggtt tgggcgttat tcatggagga tagcatgatc
     1201 gatgataacc cgtctcagcc tgaggccgac tcgttccgag gatttgagag tgctttcaaa
     1261 gctgccgcga cacagctcaa ggaagatgcg aagctggcga ctgtcgcgct tcgacagggg
     1321 caggttgaaa cattgagtca gtacaaaatg agcgattcgg agtgggaagg gttgcttagt
     1381 gccgcgcgaa aagcggcgca acacggcgaa aagcagcatc ttttgctgcg ctttccgagt
     1441 gggctttgca cagacgattc acgtgcgatc aataatcctc ccaatgatac ctggccagaa
     1501 acccttcgtg gggaggctgc ggaaatctat cagcgatggc atgagacact gaaatcgcgt
     1561 gggttcgagc taactgccag cgtcctcaac tttccgggtg gccagccggg cgatgtgggc
     1621 ctgttcctgc gttggggcga agaccggact ccggacagca aatagcaccg gtggcgtcag
     1681 ctcggccctt ctgaacgtgt cccagccact cacgtttcaa gtggccagga cgcccgacgc
     1741 agtcgtcggc cataaccatg gcagaacggt ctacatccga aaccagaccg cttcgaagac
     1801 gcagccgatc acctcatgcg cctgctcgca aattcgttgc gaataatcct ttccacgaaa
     1861 gcacgcgtgt cagccgaggg taacaagcag cttgtgcaac ttgccgtcat ccaccagggt
     1921 aaagcagacc ttgtttccgg taagtgccgt gccatccagt tccgcatggg caacgccccg
     1981 gctgacacca gacgggtttt ccacccggat ctcgtactga gcggttccgt gccggaacgt
     2041 caggtcgaag cctggccacg cccgagggat gcaaggatcc agcaccagtt ccgcaccctg
     2101 cacgcgcaaa cccaaaatcc gctccacacc tgctcggtac atccagcccg cggagccggt
     2161 gtaccatgtc catccgccgc gccccacatg cggcggcacg gagtagacat cggcggcaat
     2221 ggcataaggt tcgaccgcgt agcgccgcgc cgcgtcagct gacaacgcgt ggttgattgg
     2281 gttgatgagc gagagcaacg cgcccgcctt gtcgccatca cccagcatcg cgaacgcgat
     2341 gatcgaccag atcgcgccat gggtatactg cccgccattc tcccggatgc caggcggata
     2401 gcccttgatg tatccgggct gcagcgcggt cttgtcgaat ggcggggcga acagcagcac
     2461 cagggcgtca tcatggcgga ccaacgcccg atccaccgcc gccatcgcgc ggacggcacg
     2521 ggccggatcg gcggcgccgg agatcacgct ccaggactgt gcgatggaat cgatgcggca
     2581 ttcgtcgttc tgtgccgaac ccagcggcgt cccgtcgtcg aaaaacgcgc ggcggtacca
     2641 gtccccatcc cagccatccc gttccagcgc ctcacgcaac gccgcggcat gatgccgcca
     2701 ggttgccgcc cgcgtgctct ccgccagatc ggcgaatgcg gtcagcgtgg cgaccagcag
     2761 ccagccgacc cagatgctct cccctttgcc ttgctcgccg acctggttca tcccatcgtt
     2821 ccagtcgccg gtacccatca gcggcaggcc gtggatgccg accgcgaggc tatgatccag
     2881 cgccagcgcg caatgctcga acagcgtcgc atgccggtcg ctgatcacgg gcgaaaagaa
     2941 cgcctcgccc tgatggtcgg ccaacgccgg tccttccagg aaaggcacct cctccaacag
     3001 aaccgcagta tcgccggtga cggtgacata gtgcatgacg acaaagccga accagatgcg
     3061 gtcgtcggag atccgggtgc gaatgcccag gccggattcc gctaaccacc aatgctgcac
     3121 gtcaccctcc aggaactgcc gcgacgcagc gcgcagaagc tgcgcccgcg ccagcgccgg
     3181 tcttgacagg caaagcgcca tgacgtcctg caactggtca cggaacccat aggcgccgct
     3241 ggcctggtag aacgccgcgc gcgcccagac gcggcaagac agggtctggt acagcagcca
     3301 gcggttcagc atgatgtcca atgccgggtc cggcgtcctc acctggacgg tgccaagcgt
     3361 gtcgtcccaa aaccgggtga ccgcggccag cgacgcggtg acgtccgccg cccgctgcct
     3421 ggcgattacc gcccgcgctt cgggcagagt ctcggtctgg ccaagcagca acaccacttc
     3481 ggcggtcccg ccgggcggca ggacaaggcc ggtctgcaac gcgccgcagg gatccagccc
     3541 ggcgccgacg acgttcccca gcggagctcc ggcggccagc gccagcggat tatccagcat
     3601 cccgttgcgg ccaatgaacg tgcggcggtc gccggaccag gacgtttgtc gtccggacag
     3661 gtcggcgaac gccactcgct ggccgaacgt ggtgttccaa gggcagcggg caaacagcgc
     3721 cccggtttcc ggatccatcg acgtgacgat gaacggcgcc gtggcgcgcg tcgccccgag
     3781 aacccactcg acatagaccg tgaccgaaag ccgtcggggc cggccggatt ggttggtaac
     3841 ggtcaggcgg gaaatcttga ccggatcatc gaccggcacg aactgcagaa gatcgagcgc
     3901 gatgccgtgc gaggtatgct cgaaccggct gtagccttgc ccgtggcgcg caacatggcg
     3961 cgcgccaggc tggcggatcg gcaacgccgt cggcccccac aactcgccgg tatcctcatc
     4021 gcgcacatag atcacttcac ccggcggatc gctgacagga tcgttcgacc acggcgtcag
     4081 gtggttctgc tggctgttga gcgaccaggt ggagccgctg ccctcggccg aaacatgaaa
     4141 gccgaacata tcgttcgcaa tgacattgat ccacggcgcc ggcgtcacct gtccatcatc
     4201 gaggacaatg acgtattccc gcccgtcatc ggcaaacccg ccgaagccat tggcgaacgc
     4261 cagcgccggc agcctgcgat cgttccgcgg ttcggaggcc gcggccaccc gccgaggagg
     4321 aggaggcacc gaatcaggct gcaacgcccg ggcaagctgt tccgacaaac tcccgcgatg
     4381 cccgaaaaac accgcacgcg ccgacgcgaa caaaaggttt cggaccgtct ccgaaaccag
     4441 gtcggcccgc agcacgaaag tcgccccttt gcccggcgtc gtggccagac ctggcggcag
     4501 ccgattggca tccaccagca cctggatcgc acgctggaac tcctgggcat aggacgtcgg
     4561 ctgcgtgttc aggatgacca gatcgacgga aatatgcttc gtcagccaat attcatgacc
     4621 cagcagcaga cgccgtacca ggtcgaggtc gctgtcctgc gcaaccgcca ccagaacgat
     4681 cggcagatcg ccggaaatcc catgctgcca cagcaaggac gccgcaccgt caccgcgctg
     4741 caacgtcgcg ttcgccggcc gcaatgtcgc atccgcatag atcgcgcggc tggcaatccg
     4801 ctggaacacg ttcgcgtcct cggaatcgag ccccagatgg cgcaactgca cctgcgcctg
     4861 ggtccacgcc agcatcgttg cgcgatcgaa cgccatcgca tcctggtgcc ggcccaccat
     4921 gtcgagcacc gcgccgcgcg accccgcgac catcgtccag aaggcgatcc gcacagtctt
     4981 ccccggcggg atacgcatca gccggcgcag gctgaagacc gggtcgagca cggttccggt
     5041 ggtgccgctg agcggggtca gtgtggctaa ggctatgggc gctcggatgg ttcggcctcg
     5101 gcccaggaac cgtgcgcgat ccgtttcgaa ctgcggatcg cccacggtct cgccttcggt
     5161 gacagcgaga tgtgccgccc agacttccgg ttcattgcct gaacgccggc ggcgggttgc
     5221 cagcagggcg ccggcctcga acgcagtctc gacaaacatc ttggaaaaca ccggatgcgc
     5281 atcgtccgcg gcttgcgggg cgagcaccag ttcggcatag gaggtaatct ctatgtcgcg
     5341 gctgcgcggc ccatggttgg tgacggagat acggcgaacc tcggcatcat cctcggagga
     5401 gacggcaacc tccatccgcg tcgtggtcat gccgtcacgg cgggtgatct cggcccgtcc
     5461 ctcggaaaag acaacatcgt aatggcccgg ctccacgccg ctggactggt agccggcgga
     5521 ccacacggtg ccactggccc ggtctcgcag gaggacgtaa ctgccccagg aatcgcgcgt
     5581 cacgtcttcc tgccagcgtg tcactgcgat atcccgccaa cggctgtagc cggagcccgc
     5641 agaggtgagc atcacggcat accgcccgtt cgacatcaaa tgagtccgcg gtgagaacgc
     5701 gtgcgggttg tcatagcggc gctggatcga tgtcaggtag tcgctggcgc tggttgccgc
     5761 ctgcgggacc tggatcatcg gtttggcgat tgcaacgtcg tgcggaatcc gctcttgcag
     5821 cagcaattcg gtcgcctgga ccatcggctc cgtgtgaaag cgccggcgca tcgccccgcc
     5881 gccaatcgtt tcagcgatgg ccagtacggt catgccctga tgatgcgcca tgaaggcgcg
     5941 cacgacggcg acacttgtcc cggccggcag gcgcgatttt gtgtagtcca gggcctcata
     6001 ccagccgtat tgcccacgtc cgcccgcgtc cgccatgcgg gcgaagttgg cagccgcggc
     6061 accggggtcg atcatcgccg cgagcgccgt ggcatagggc gcgatcacag tgctgtcacc
     6121 gaccccacgc ttgagtccga ggctcgggac gccgaagctg gaatactgat aggtgaattc
     6181 aagatcgcgg gcgttgtaag cggactccga ggcaccccat ggcacgtcgc gcgccgcgcc
     6241 atacttgatc tgctgccgaa ccacctcctg attgctgcgt tccaacaggc tgccgttcgg
     6301 ggcgcgcatg accagtgacg gcatcagata ttcgaacatc gacccggacc aggagaccaa
     6361 cgccgcttcg ctcccgacgg ggatcatcgc gcgccccaac cggaaccagt ggcgtgtcgg
     6421 caggtcaccc ttcgcgatgg cgataaaact tgtcagtcgc gcctcggagg ccagcaagtc
     6481 gtagtcgttc ggatccaggc tgccgtcgcc aacgcgatag ccaatggaaa gcagctcgcg
     6541 tgagctgtcg aacaggatac tgaaattcat ttcgtcgaag aacccgcgcg cagccttgcc
     6601 gagtgcctga aggcggacgg acaggtcggt ggctctgcga gcggagtcct ccaacgcctg
     6661 gacgaattcc acattctcac ctgttgcgat cgcgcacgcg cacagcgccg gcagttcggc
     6721 cagggtcggc atacgggccg ccagtgcggg aacgagcatc gcccatggcg cgaggactgc
     6781 cagatttcgc tgctgtccgc gcgccgccgc cagcattgca tccgcccaga ttggcccgtc
     6841 gcgacggaac cctggattcc cggcttggcc cgcgcagagt tgcctgacca atgccgggat
     6901 gttttcgacg ggcggcatga gccattcgag ttcggcggcg atcgtatcgg gcgtttccgg
     6961 accgagtctt gtcgtatccg gctcaagggc cgatgtcagg cctttcagca ccgcgaccag
     7021 gttctgccag tctggtgcgc gcaagtcctc cccaacgtcg tggatggctt ccagcaggag
     7081 cgccagcggg tccccgatcc ccattcgcca gttggcggcg atgaggggtt gctcggccat
     7141 ttcggcgcac gcgttccaca aggcgatcag gtgtccggcc agatttccgc tgtcgaccga
     7201 ggagatgtat cggggctcca gcggacgcag gtcgagcgtc ccgtaccagt tgtagaagtg
     7261 ccccagatgc cgttccatct tggtcatgga agcgaacgtg gcttccagcc gttcagtcgc
     7321 ttcgaggatg gtgatccagc cgaagtctgc cgccgcggat gccgatagca aataaagccc
     7381 gatattggtg ggcgatgtcc ggtgcgcgac gaccggcttc ggatcttcct ggaaattgtc
     7441 gggaggcaac atgttgtctt ccaccgtgac gaagatttcg aaaaatctcc aggtccgccg
     7501 agcgatcaag cgcagagcat ggatgtcctc ggcggcagcc gggcggatgc cggatggtgg
     7561 cgagggcttg ctgatccatc gtgcgacgac cggcgacagc agccacagaa caataaacgg
     7621 tgttccgatc ggccaaaccg cggctgggca gcaaatgaga aggaccgcgg cgccgatggt
     7681 taaagcgata ccgcccgcca tccctcggta gaagccgatc aggctgaggg acggcgagat
     7741 cttggcctgg gatgctgtga cccattcgag gagatggcgc cgcgtgatga gcagccgata
     7801 gagggtcagg acaatcgctt gccccatgac ccaggcctgg tgtggcagga acgcgaccag
     7861 caggataatt tgcgacaacg cgagctgcag gtcctcggcc accgcacgca ggtgcatcag
     7921 tctggcgagg cctcgccggc ggggcagaat ccccgtcacg aacgggatca gcgcctggat
     7981 ggcaatcgct gcgagcactg acacggtcca tcgcggcgga tcggcgaatg gcaaggtcca
     8041 cccgatgacg agggccgcga acgccgccgg cgcggacagg gaccgccgca gattgtccag
     8101 catcttccaa cgcccgacca ggggcattga tcggcggccg agaatccagg gcagcaactg
     8161 ccaatcaccg cgcgcccagc gatactgccg cgacaccgcg acatcgtagc gagcgggaaa
     8221 ctcgtcgatc agttcgatat cgctaatcaa gccggcgcgc ccgaaggtgc cttccaacag
     8281 atcatggctc aacaccgtgt tgtcggaaat ccgacctttc atggcagctt cgaacatatc
     8341 cacgtcgtag atgcccttgc cgcaatagga cccttcgccg aaaaggtcct gatagacgtc
     8401 ggagaccacg caggcgtaag ggtccatgcc gctggcgttg gcgaacagac gctgaaacac
     8461 cgatccgtcc cgcccggtcg gcagcgcggg ggtgacccgt ggctgtagca ctgcgtatcc
     8521 gtcgaccacg cggcctgttc cggcatccag atccggctga ttgagcgggt gcgccatctt
     8581 gccgaccaaa cgcctggcag tatccctcgg cagccgcgta tcggcgtcga ggacaatgac
     8641 gtagcgcacg ccgaccggag gttggttggg actgggaacg aaactggtat cgccggcgcc
     8701 tcgcagcaac cggttcaact cgtgcagctt gcctcgcttg cgttcccagc cgatccactt
     8761 gccctcggcc gggttccact gccggcgccg atgcaggagc aggaaccggc ttgcccccgg
     8821 tgccggaccg taacgggcgt tcagggccgc gacgccatcg gttgcggcct gcagcaaggc
     8881 gtcgtcgccg ggcattgtct cggtcgccgc atctgcccag tcggagacca gcgcgaagga
     8941 aagttcgtcg tcactgttgg cgaggtgatg gacttccagg tgcctcacca actccgcgat
     9001 ctccgccagc gacgtcagca tcgtcggcat ggcaaccagc gtgcgcagcg tgggtggcac
     9061 cccaccctca agctccagcc ccggaagccg tgtcgcggag aaccggttgg tcgcggcgta
     9121 atttgtcaat gccatcgcgg catccgacgc gggtatgagg ccgaacagga cgagttcggc
     9181 caggttgcgc atcgaaccat cctgtagcgt ccagcctgcg acaaggccga ggatgaccgt
     9241 cgcgatcgct acgacgacga cgccatagcc ggcaatcccc accgtctcat tggcccgcag
     9301 cagccggctt ctgatggtcg gacggcagtt cacttccgcc tcgaaacccg ggcgtcccct
     9361 cgcgatgagg tagtagccgg gatcggcagc gcgtccagtc gccgctgtcc gagcggcggc
     9421 gaccgcacag gcagcgatct cggtctccgg gcggcacgac ccgcgggcga tcgcctcgat
     9481 cgcatgacgg tagagttccc gtgtcgcgaa atcctggctg gcaaagtcgc tgccgtcacg
     9541 cagcaccgca tcgaccgggc tgacgctctc gaacagttca cgccagtcga tcgatgatat
     9601 ctgcctcatg ctggtgatga cgttgcggat cgttacattt gccgcaccct cacgttgctg
     9661 ctggatgtcg acgatccgcc ctgtcgtggt tgcctggctt gccaaggcct tgtccagcca
     9721 acgcagcgcc ggtgccacgc ccgggtcttc ctcgcgcagg cggcgcacga gctgggcgga
     9781 gaatgccgtc ggcaagggcg tggcgaccgt ggccaggaca tcttccgctg catc
//
LOCUS       DATAVD010000966         4326 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1767208, whole genome shotgun sequence.
ACCESSION   DATAVD010000966 DATAVD010000000
VERSION     DATAVD010000966.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4326
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1767208"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1024
                     /locus_tag="VHX39_18445"
     CDS             <1..1024
                     /locus_tag="VHX39_18445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEX3993157.1"
                     /translation="AGSNLGLLRIHTDSGLEGHAFLGSASNPAAMDGPQLIRSLKPML
                     MGKNPLERERLHAGMRLVSRTVSYRTIGAVDTALWDLAGKIAGLPVHALMGTYRTSIP
                     AYASSQVLPDVAAYVDQAQAFKAAGWQAYKIHPPRDPDHDIRVCQAVRKAVGDDYRLM
                     LDSTWSYDYTDALRVGRAIQDLGYYWFEDPLSDEDIYGYVKLRQKLDIPIMATEYPAG
                     GLDTYPIWLTEKATDYLRGDIPNKGGLTTMLKTAHLAEAFGMKYEVHHSGNSLNNRAN
                     LHLCMALRNTTMWEVLLPDGAHKYGMVKDLEIDANGLMHAPTEPGLGGEIDFELITRK
                     TEAVLR"
     gene            complement(1402..1638)
                     /locus_tag="VHX39_18450"
     CDS             complement(1402..1638)
                     /locus_tag="VHX39_18450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993158.1"
                     /translation="MVKRRKEEDIAGILEFEGRSSEDPEFLEWLADHKSRNGGKIRVS
                     QGGKGVRVMFAKDADMALWQRRSDAATKGKKFVA"
     gene            complement(1751..2125)
                     /locus_tag="VHX39_18455"
     CDS             complement(1751..2125)
                     /locus_tag="VHX39_18455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6481 family protein"
                     /protein_id="HEX3993159.1"
                     /translation="MPNVKRAPSTKPAHARTNFDDRLSAAAAAKQALLERFRARPSPD
                     DPAEIARQAALKAISDARDARAAERRAAKEAEAARIAAELAARKTAEQIAAAEAKARA
                     AALEAERKAARDARYAARKARK"
     gene            complement(2170..3114)
                     /locus_tag="VHX39_18460"
     CDS             complement(2170..3114)
                     /locus_tag="VHX39_18460"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3993160.1"
                     /translation="MQRNNMTPKLGYLLPTREQIMEGRPETGPLLALATRAGALGFDS
                     VWVGDSLTARPRHDPLTLLAGVVGRVPGMTVGTAVLLPMLRNPVILAHQVATLDQLSE
                     GRLILGVGFAADRPNIRAEFAAAGVPFEHRIGRMLEGLRLCKALWSGQPVDWDGRWQT
                     VQAVVAPTPHRAGGPPLWIGGNLQGSLDRAGKYFDGWFPIAPGAADFASGLAHVRNVA
                     RENGRDPSCVSGAMYLTVSLDDDAAKADERLNGFLERYYGQPAVVTRRRQACYAGPEA
                     GLAEWLAGYADAGASHLVLRFAGDHERHLAAVAKLRTL"
     gene            complement(3140..3994)
                     /locus_tag="VHX39_18465"
     CDS             complement(3140..3994)
                     /locus_tag="VHX39_18465"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HEX3993161.1"
                     /translation="MKIGAVMFFTTDSMQPAVLGRALEERGFESLWVPEHTHVPSTRL
                     TPYIGGGPLPRPYYDIYDPFLALNAAAAATTRLNVGTGIALVVQRDPIVTAKMVSTID
                     QLSRGRFLFGVGNGWNRDEIENHGTAFGSRNKLARERIEAMQAIWTHDEPSYEGEFVK
                     FGPMSQWPKPFQKPYPPIIVGGAFPYAAQRAIRYGNGWIPRADRLEHEGVGVVIKQFR
                     EMAVEAGRDPGSLPITIFRVPDDLVKLRFCQEVGIDRVVFSLPAEKEDKIMPILDRWV
                     AVKRELGV"
     gene            complement(4010..>4326)
                     /locus_tag="VHX39_18470"
     CDS             complement(4010..>4326)
                     /locus_tag="VHX39_18470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993162.1"
                     /translation="RDRAEAIRLAKPSLEEKYKIYKDWGQDKVMPSGDAFSMDFEELM
                     NDRFLFGSPNEVVEQILVLKRRFGINTLILGIHWVGMPASLAMEQMQLISEEVFPAVR
                     SA"
BASE COUNT          828 a         1593 c         1170 g          735 t
ORIGIN      
        1 ggccggcagc aatctcggcc tgttgcgtat ccacaccgac agcgggttgg aaggtcatgc
       61 cttcctgggt tcggccagca atccggcagc aatggacgga ccgcaactga tccggtccct
      121 gaagccgatg ttgatgggca agaacccgtt ggagcgggag cgcctgcacg ccgggatgcg
      181 gctggtcagc cgcaccgtca gctatcgcac catcggcgcc gtcgacaccg cactatggga
      241 cctcgcaggc aagatcgccg gcctgccggt ccacgccctg atgggcacct accgcacctc
      301 gatccccgcc tacgccagtt cgcaggtgct gcctgacgtg gctgcctatg tcgatcaggc
      361 ccaggcgttc aaggccgccg gctggcaggc ttacaagatc cacccgccgc gcgatccaga
      421 ccacgacatc cgggtctgcc aggccgtacg caaggcggtc ggcgacgact accggctgat
      481 gctcgattcc acctggtcct acgactacac cgacgccctg cgggtcggcc gcgcgatcca
      541 ggacctgggc tactattggt tcgaggaccc gctctccgac gaggacatct acggctatgt
      601 caaactgcgc cagaaactcg acatcccgat catggccacc gaataccccg ccggcggcct
      661 cgacacctat ccaatctggc tgaccgagaa agccaccgac tacctgcgcg gcgacatccc
      721 caacaagggt ggcctgacca ccatgctgaa aaccgcccac ctcgccgagg cgtttggcat
      781 gaagtacgag gtccatcact ccggcaattc cctgaacaac cgcgccaacc tgcatctgtg
      841 catggcgctg cggaacacca cgatgtggga agtcctgctg cccgacggcg cccacaaata
      901 cggcatggtc aaggacctgg agatcgacgc caacggcctg atgcacgccc cgacagaacc
      961 tggcctgggc ggcgaaatcg atttcgaact gatcacacgc aagaccgaag ccgtgctgcg
     1021 ctaaacaccc cccaaacgca aaagggcgcc gttcgtgacg ccctccgtgc catcccagct
     1081 cagcctggta atccggtccc gagagaagca tcccgtgcgg tcgggtggat cggcccacaa
     1141 aatcaagggc tggtggttcg ccgggttgag tcaaacatct ttcgacgtca tcggcataat
     1201 tttgaggtgc tgaatgccga tgcggataaa gcccggcgag aaaagtccgg atgcacggcc
     1261 gatcccgcgt cttctcggac tatcgcaacg ggaattcctg aatgcaccct gcgcagggtc
     1321 cgccatgcgg ccgaacaatc agcgaagacc gcgtgggatg aaatctattt aatgcggctg
     1381 gcggaacacc agccggacat atcacgcgac gaatttctta cccttcgtcg ccgcgtccga
     1441 ccgccgctgc cacagtgcca tgtccgcatc cttggcgaac atcacgcgca cgcccttgcc
     1501 gccttggctg acccggatct tcccaccgtt gcgggacttg tggtcggcca gccattccag
     1561 gaattcgggg tcctcgctgc tgcgtccttc gaattccagg attccggcga tatcttcctc
     1621 tttgcgacgc ttgaccatag gtgcctccgg gacgccctac acggcgtttc ggttgaaaga
     1681 aaatggactc atccgtgcca aaggcacgca ctcgaacggg gaggcggccg cgttatccgc
     1741 ggctaaaaac ctatttccga gccttgcgcg cagcatagcg agcatcccgc gccgccttcc
     1801 gttcggcttc gagcgccgct gcccgagcct tcgcctcggc ggcggcaatc tgttccgcgg
     1861 tcttgcgagc cgccagttcg gcggcgattc gcgccgcctc tgcttccttc gcggccctgc
     1921 gttcggccgc acgcgcatcc cgcgcgtcgc tgatcgcctt cagcgccgcc tgccgtgcaa
     1981 tctcagccgg gtcgtcgggg ctcgggcggg cgcgaaagcg ctccagcaag gcttgtttgg
     2041 cggcggcggc ggcactcagg cggtcgtcaa aattggttcg tgcatgggca ggcttggtcg
     2101 aaggggcgcg tttaacgttc ggcatgcgct gcccaataca gcggacaggg ccaatgggca
     2161 acctgttccc tacaaagtcc tcagcttcgc caccgcagcc agatgtcgct cgtggtcccc
     2221 ggcgaagcgc agcaccaggt ggctcgcccc ggcgtccgcg taaccggcca gccactccgc
     2281 caaccccgct tccggtcccg catagcacgc ttgccgccgg cgcgtgacca cggccggctg
     2341 gccgtaatag cgctccagga agccgttcag ccgctcgtcc gccttcgccg cgtcatcatc
     2401 gagcgagaca gtcaggtaca tcgccccgct tacgcaagac ggatcgcggc cgttttcccg
     2461 cgccacattc cgcacatgcg ccagcccgga ggcaaaatcc gccgcgccag gcgcgattgg
     2521 aaaccagccg tcaaaatact tcccggcccg atccaggctg ccttgcagat tgccgccgat
     2581 ccaaagcgga ggcccaccgg cccgatgcgg ggtaggggcc accaccgcct gcaccgtctg
     2641 ccaccgccca tcccagtcca ccggttggcc cgaccacagc gccttgcaca accgcagccc
     2701 ctccagcatc cgcccgatcc gatgctcgaa cggcacgccc gccgcggcaa attcggcccg
     2761 gatattcgga cgatccgccg cgaacccgac ccccaggatc agtcgtccct ccgacaactg
     2821 gtccaatgtc gccacctgat gcgccaaaat caccggattc cgcagcatcg gcagcaacac
     2881 cgcggtgccg acggtcattc ccggcacccg tccgaccacc cctgccaaca gcgtcaacgg
     2941 atcatgccga ggccgcgccg tcagcgaatc ccccacccag accgagtcaa accccagcgc
     3001 ccccgcccgc gtcgccaacg ccagcaaagg ccccgtctcc ggccgcccct ccataatctg
     3061 ctcccgtgtc ggcagcagat acccaagttt cggcgtcatg ttgttcctct gcatcaggcc
     3121 cgtctcgcgg ccgcgaggct caaaccccca gctcccgctt caccgcgacc caccgatcaa
     3181 ggatcggcat gatcttgtcc tccttctccg ccggcaaact gaacaccacc cgatcgatcc
     3241 cgacctcctg acagaaccgc agtttcacca gatcatccgg cacccggaat atcgtgatcg
     3301 gcaatgaacc cggatcccgc ccagcttcca ccgccatctc ccggaactgc ttgatcacca
     3361 cccccacgcc ctcatgctcc aaccgatccg cccgcgggat ccatccattc ccataccgaa
     3421 tggcccgctg agccgcatac ggaaacgctc ccccgacaat gatcggcgga tacggcttct
     3481 gaaacggctt cggccactgg ctcatcggac cgaacttcac gaactctcct tcgtacgacg
     3541 gttcatcgtg agtccagatc gcctgcatcg cctcgatccg ctcccgcgcc agcttgttcc
     3601 gtgagccaaa cgcagtgcca tggttctcga tctcgtcacg gttccacccg ttgccgaccc
     3661 caaacagaaa ccgaccccgc gaaagttggt cgatcgtcga aaccatcttc gccgtcacga
     3721 tcggatcccg ctgaaccacc agcgcgatgc ccgtcccgac attcaacctc gtcgtcgcgg
     3781 ccgccgcggc attcagtgcc aggaacggat cgtaaatgtc gtagtacggc cgaggcagcg
     3841 gccccccgcc gatgtaaggc gtcagccgag tagacggcac atgcgtatgc tccggcaccc
     3901 acaaactctc aaaccccctc tcctccagcg ctcggcccaa caccgccggc tgcatggaat
     3961 cggtcgtaaa gaacatcacg gcgccaattt tcatatccaa cgatccttct caggcggaac
     4021 gaacggcggg aaacacttct tccgagatca actgcatctg ctccatcgcc aggctcgccg
     4081 gcatgccgac ccagtgaatg cccaggatca gcgtattgat cccgaaacgg cgcttcagca
     4141 ccaggatctg ctccaccacc tcgttcggtg acccaaacag aaaccggtcg ttcatcagct
     4201 cctcgaaatc catgctgaac gcatcgccgg acggcatcac cttgtcctgc ccccagtcct
     4261 tgtagatctt gtatttttcc tccagcgacg gcttcgccag ccggatcgcc tcggcgcggt
     4321 cgcggg
//
LOCUS       DATAVD010000967         3951 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3442298, whole genome shotgun sequence.
ACCESSION   DATAVD010000967 DATAVD010000000
VERSION     DATAVD010000967.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3951
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3442298"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..757
                     /locus_tag="VHX39_18475"
     CDS             <1..757
                     /locus_tag="VHX39_18475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX3993163.1"
                     /translation="ESGELRPIDRPEPTMPETYPVTRRNKVVRRPQRGFYDKATVHAI
                     LDSALLAHISYVMDGQPFCTPTGFWREGEHLYWHGSSASRMIRFQKPGVPVCLTVTHL
                     DALVLARSGFHHSVNYRSVMAFGTAHLVEGDAAKRRAMDGFVDRFYPGRSALLREPNA
                     QEFKATTFVMMEIEQASAKIRDTHVGDDEEDYALPIWAARYPVHQVIGAAEPCPRQHP
                     DAAIPPGMASYQPDRHLDEVMTETYQANYPSDG"
     gene            840..2645
                     /gene="lepA"
                     /locus_tag="VHX39_18480"
     CDS             840..2645
                     /gene="lepA"
                     /locus_tag="VHX39_18480"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HEX3993164.1"
                     /translation="MTNTPTDHIRNFAIIAHIDHGKSTLADRLIQYTGALSDREMTNQ
                     VLDSMELERERGITIKAQTVRLSYTAKNGETYELNLMDTPGHVDFAYEVSRSLAACEG
                     SLLVVDASQGVEAQTLANVYQAIEANHEIVPILNKIDLPAAEPERVKQQIEDVIGLDA
                     SDAVEISAKTGLNIDGVLEALVHRLPAPTGDANAPLKALLVDSWYDPYLGVVILVRIK
                     DGRLRRGQKIRMMAKGSTHVIEQVGVFTPRMVVTDDLGPGEMGYITAAIKTVADCNIG
                     DTITDDRTPAAEPLPGFKPSIPVVWCGLYPVDADDFEKLRESLGKLRLNDASFHYEPE
                     TSAALGFGFRCGFLGLLHLEIIQERLSREFDLDLIATAPSVVYRVHRTNGQVMELHNP
                     VDMPDPSQIDHMEEPWIKATIMVPDEYLGSILALCTERRGIQADLTYVGNRAMVVYRI
                     PLNEVVFDFYDRLKSVSRGYASFDYQMDGYAEGDLVRISILVNNDPVDALSFIAHRAV
                     AETRGRAICGRLKDLIPRQLFKIAIQAAIGGRVIARETIGALSKDVTAKCYGGDITRK
                     RKLLEKQKEGKKRMRQFGKVEIPQSAFLAALKMDA"
     gene            2971..3576
                     /locus_tag="VHX39_18485"
     CDS             2971..3576
                     /locus_tag="VHX39_18485"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxychromene-2-carboxylate isomerase"
                     /protein_id="HEX3993165.1"
                     /translation="MALHIDYYASLNSPWTHMGAARIEAMAAAHDASLRIYPVDFGEI
                     FANSGGLPLPRRSPQRQAYRLQELARWREHLGIPIHIQPKHFPSSEALTAPCIVAVRE
                     TMGDQPAIKLAHAVLKAVWQRELNPGDPATFATLIKECGLDADAVMKLGGDPRWTERR
                     NADTKAALARGVFGAPSYVIGEDIFWGQDRLAFVERRLARG"
     gene            3580..>3951
                     /locus_tag="VHX39_18490"
     CDS             3580..>3951
                     /locus_tag="VHX39_18490"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3993166.1"
                     /translation="MRVFTVLPLRHWRDAAPAAQAAEAAGFDAVMSVELRHDPFIPLA
                     QAALATEKVELTPSVAIAFPRSPTVMAHIAWDLQANSNGRFVLGLGSQVKGHNERRYG
                     IAWTPPAPRLRDYVLALRALWR"
BASE COUNT          761 a         1224 c         1234 g          732 t
ORIGIN      
        1 ggaatcgggc gaactacggc caatcgatcg tccggaaccc acaatgcccg aaacctaccc
       61 cgtcacccgc cgcaacaagg ttgttcgccg cccgcaacgc ggtttctatg acaaggcaac
      121 cgtccacgcc attctcgaca gcgcgttact cgcgcatatc tcttacgtca tggacggcca
      181 gccattttgc accccgaccg ggttctggcg tgagggcgag catctgtatt ggcacggatc
      241 ctccgccagc cggatgatcc ggttccagaa accgggcgtg ccggtgtgcc tgacggtgac
      301 ccatttggac gcgctggtgc tggcgcggtc gggatttcat cattcggtca actaccggtc
      361 ggtgatggcg ttcggcacgg cccacctcgt tgaaggcgat gcggctaagc gccgcgccat
      421 ggacgggttc gtcgaccggt tctatccggg acgatcggcc ctgcttcgcg agccaaacgc
      481 ccaggagttt aaggcgacaa cgttcgtgat gatggaaatc gagcaggctt cggccaaaat
      541 ccgcgacacc catgtcggcg acgacgagga ggattacgcc ctgccgatct gggcggcccg
      601 ttatccggtc caccaggtga tcggcgcggc agaaccctgc ccaagacagc atccagatgc
      661 cgccatcccg cctggaatgg ccagctacca acctgatcgc catttggatg aggtgatgac
      721 cgagacttat caggccaact acccatccga cggatgacat cgcggcgcac aacgactatc
      781 agaggcagga ccggagggtc accgtctgac ccctgacacc tggcccctga cccctgaaaa
      841 tgaccaacac gccgaccgac catatccgca acttcgcgat catcgcccat atcgaccatg
      901 gcaaatccac cttggccgac cggctgatcc agtacaccgg cgctttgtcc gaccgcgaga
      961 tgaccaacca ggtcctggac agcatggagc tcgagcggga gcgcggcatc accatcaagg
     1021 cgcagaccgt ccgcctgtcc tacaccgcca aaaacggtga gacctacgaa ctgaacctga
     1081 tggacacgcc cggccacgtc gatttcgcgt acgaggtcag ccgcagcctg gcggcctgcg
     1141 aggggtcgct gctggtggtc gatgcgagcc agggggtgga ggcgcagacg ctcgccaacg
     1201 tctaccaggc gatcgaggcg aatcacgaaa tcgtcccgat cctcaacaag atcgaccttc
     1261 cggccgctga accggaacgc gtgaagcagc agatcgagga tgtgatcggg ctcgacgcgt
     1321 ccgatgccgt cgagatcagt gccaaaaccg ggctgaacat cgacggcgtg ctggaggcgc
     1381 tggtgcaccg cctgcccgcg ccgaccggcg atgccaatgc accgctcaag gccctgctgg
     1441 tcgatagctg gtacgacccg tatttgggcg tggtcatcct ggtgcgcatc aaggacgggc
     1501 ggctccggcg cggccagaag atccgcatga tggccaaagg ttccacccat gtgatcgagc
     1561 aggtcggcgt attcacaccg cgcatggtgg tgaccgacga tctcgggccg ggcgagatgg
     1621 ggtatatcac cgccgccatc aaaaccgtcg cggactgcaa catcggcgac acgatcaccg
     1681 atgaccggac gccggcggct gagcctctgc cgggattcaa gccatcgatc ccggttgtct
     1741 ggtgcgggct ctatccggtc gatgccgacg acttcgagaa actgcgcgag agtctgggca
     1801 agctgcgcct gaatgacgcg agctttcact acgagcccga aacctccgcc gccctcggct
     1861 tcgggttccg ctgcggcttt ctgggtttgt tgcatctgga aatcattcag gaacggctga
     1921 gccgggaatt cgatctcgat ctgatcgcga ccgcgccgtc ggtggtgtat cgggtgcatc
     1981 gcaccaacgg ccaggtgatg gagttgcaca acccggtcga tatgcccgac ccgtcgcaga
     2041 tcgatcacat ggaagagcca tggatcaagg cgacgatcat ggtaccggac gagtacctcg
     2101 gcagcattct cgcgttatgc acggaacggc gcggcattca ggccgatctg acctatgtcg
     2161 gcaatcgcgc catggtggtc taccggatcc cgctgaatga ggtggtgttc gatttttacg
     2221 accgcttgaa atcggtttct cgcggctatg ccagtttcga ctatcagatg gatggctatg
     2281 ccgagggcga tctggtgcgg atttcaatcc tggtgaacaa cgatccggtg gacgcgctga
     2341 gtttcatcgc gcatcgtgcg gtggccgaga ctcgcgggcg ggcgatttgc gggcggctga
     2401 aggacctgat cccgcggcaa ttgttcaaga tcgccatcca ggcagcgatc ggcgggcggg
     2461 tgattgctcg cgaaacgatc ggcgcgctgt cgaaggatgt gaccgcgaaa tgttacggcg
     2521 gggatatcac ccgcaagcgg aaactgctgg agaagcagaa ggaaggcaaa aagcggatgc
     2581 gccagttcgg gaaggtggaa atcccacagt cggcgttcct ggcggcattg aagatggatg
     2641 cgtgatcgac ttctgtcgtt gcggggtcgc ggcctgattg agacgatgcc atgaacggtt
     2701 ggcccgcgaa taacttcgtc cgttcgtgcg tggggtgagg cttcataaat caccaaggac
     2761 acggagcgcg cgaaggacac ggaggattgg tgccgcaaat gaaagcttcg tgccttttgc
     2821 gcgcttcgtg cccttcgtgg tttatgagac ctgccagcct gctccggcga ttggaccggt
     2881 cggcatccca aacggcgtga tcggacaagc cgaaccttgc cccaatcgat ctcctccatc
     2941 aggattgcgc cgtaacggag gatcgcccgc atggctttgc atatcgacta ctacgcgtca
     3001 ctgaactccc catggacgca catgggtgcc gcgcgcatcg aggcgatggc cgccgcacat
     3061 gatgcctccc tccgcatcta cccggtcgat tttggtgaga tctttgcgaa ttccggcggg
     3121 ctgccgttgc ccagacggag tccgcagcgg caggcgtacc ggctgcagga actggctcgc
     3181 tggcgcgagc atttgggcat cccgatccac atccagccga agcattttcc ttcgagcgag
     3241 gcgctcaccg ccccctgcat cgtcgcggtc cgcgaaacaa tgggtgacca accggcaatc
     3301 aaactggcgc acgccgtgct gaaggccgtt tggcaacgcg agcttaaccc gggcgatccg
     3361 gcgacgttcg ccaccttgat caaggaatgt gggctcgatg ccgacgccgt aatgaaactc
     3421 ggtggcgatc cgcgatggac agaacgccgt aacgccgata ccaaggcggc gctcgctcgc
     3481 ggtgtgtttg gcgcgccctc ctatgtcatc ggcgaggata ttttctgggg ccaggaccgg
     3541 ctggcattcg tcgaacgccg tctcgcgcgc ggctgatcga tgcgagtctt taccgttttg
     3601 ccgctgcgcc attggcgcga cgcggcacct gcggcgcagg ccgcggaagc tgccggcttc
     3661 gacgcggtca tgtcggtcga attgcgccac gacccattca tcccgctggc ccaggcggcg
     3721 ttggcgacgg agaaggttga actgacgccg tctgttgcta ttgcctttcc gcgttcgccc
     3781 accgtgatgg cgcacatcgc ctgggatctg caggccaact ccaacggtcg tttcgtgctt
     3841 ggtctgggct cgcaggtcaa aggtcacaat gaacgccgct atggcatcgc ctggacgccg
     3901 cctgcaccgc gcctgcgaga ttacgtgctg gcattgcgcg cgctgtggcg c
//
LOCUS       DATAVD010000968         1535 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1022116, whole genome shotgun sequence.
ACCESSION   DATAVD010000968 DATAVD010000000
VERSION     DATAVD010000968.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1022116"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1535
                     /locus_tag="VHX39_18495"
     CDS             <1..>1535
                     /locus_tag="VHX39_18495"
                     /inference="COORDINATES: protein motif:HMM:NF016915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993167.1"
                     /translation="FDNCAEDANQPIETLAADLGKFLNSITYDDGTPVTQIDVVAFSM
                     GGLIVRAYLAGLQTNGTLSPPVNTLVRNLVLIATPNFGSFLATNSASVIISGTQSAEM
                     IAGSAFLWNLSMWNQHVDDLRGVNAIAVIGNAAVYGNNQTGISLANGSDGVVELTSGS
                     LGFVAQQTSVTRIVPYCQVDPYAFTNQNLAYSCTAPGIANVTSQSQPTGLIVRSFLAG
                     TPDWRLIGTTPATDPLLTVNGGTFFGVVNQTDSLVTDLAQVIWGTLPMQNGGATNTIF
                     YNNFVYGTGAFQPTSSSLGTITCGTVTEAVGYFASARCKIGAAIISVGPLLTGPALVV
                     SGGSAITITGATFGYPCNGCKVTATPAGSTAAQTLSVSSWTDTSITAQLPANLTGLVT
                     IAVWGVAEQYGSDTINIMVAAPAAPATITVSSQSMQFSAAGSQTVQITNSGNGALAWT
                     ATASDPWLSVSPASGTAPSTLTVSVSTTGLSAGTYNGSVQIAAAGASNSPLAIPVTLT
                     VAA"
BASE COUNT          312 a          510 c          419 g          294 t
ORIGIN      
        1 tcttcgataa ctgcgccgaa gacgccaacc agccgatcga aacactggcc gccgatctgg
       61 gcaaatttct gaactcgatc acctatgacg acggcacgcc ggtaacgcaa atcgatgtcg
      121 tcgccttcag catgggcggc ctgatcgtga gggcttatct cgccggcctg cagacgaacg
      181 gaaccctcag cccgccggtc aacaccctgg tgcggaatct ggtcctgatc gcaacgccca
      241 acttcggttc ttttcttgcc acgaattccg ccagcgtcat catttccggt acgcaaagcg
      301 ccgaaatgat cgcgggcagc gccttcctct ggaacctgtc gatgtggaat cagcatgtgg
      361 acgatctccg cggagtgaac gcgattgcag tcatcggcaa tgccgccgtg tacggcaata
      421 atcagaccgg catctcgctc gccaatggca gcgatggcgt cgtcgaactc acgagcggat
      481 ctctcggctt tgtcgcgcag cagacttcgg taacccggat tgtgccgtat tgccaggtcg
      541 acccgtatgc cttcacgaac cagaacctgg cctacagctg caccgccccg ggcatcgcaa
      601 acgtcacgag tcagtctcaa cccacggggc tgatcgtgcg ttccttcctg gccggcacac
      661 ccgactggcg gttaatcgga accacccccg ccaccgaccc gttactcacc gtaaacggcg
      721 gtacgttctt cggagtggtg aatcagaccg actccctggt caccgacctg gcacaggtca
      781 tttggggaac tctgccgatg cagaatggcg gagccacaaa cacgatcttc tataacaact
      841 tcgtctatgg caccggggct tttcagccga ccagttcttc tcttggtacg atcacgtgcg
      901 gaacagtgac cgaggctgtc ggatactttg cgtccgcgcg gtgtaagatc ggggccgcca
      961 tcatctccgt cggccctctt ctcaccggtc ctgcactcgt cgtcagcggc ggctccgcca
     1021 taacaatcac gggcgcgacg ttcggctatc cctgcaatgg ctgcaaagta accgcgactc
     1081 cagcaggttc cactgcggcg cagaccctgt cggtttcatc ctggaccgat acgtcgataa
     1141 cggcgcagct gccggcaaac ctcacgggtc tcgtaaccat tgccgtttgg ggggtagcgg
     1201 agcaatacgg cagtgacacc ataaacatca tggtcgccgc gcccgcagcg cccgccacga
     1261 ttacagtgtc gtcccagagc atgcaattct cggcagccgg ctcacaaaca gtccagatca
     1321 caaacagcgg aaacggcgcg ctcgcatgga cggcaaccgc aagcgaccca tggctcagcg
     1381 tttcgcccgc atccggaacc gcgccatcca ccctgactgt ctccgtctcg acaacgggat
     1441 taagcgcggg aacctacaac ggttcggtgc agatcgcggc cgccggtgcc tccaattctc
     1501 cgttggcgat accggtcact ctgacggtag cggcg
//
LOCUS       DATAVD010000969        10317 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2884879, whole genome shotgun sequence.
ACCESSION   DATAVD010000969 DATAVD010000000
VERSION     DATAVD010000969.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10317
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2884879"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..285)
                     /locus_tag="VHX39_18500"
     CDS             complement(<1..285)
                     /locus_tag="VHX39_18500"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEX3993168.1"
                     /translation="MDDLFEIMRSTRSMRRLKPDPVPDDLLRKVLEAGTFAANGGNSQ
                     SWRFLVIRDPAVKTAAAVWYAKAWEVVGARYRASDPPAGTSRERFDRMLAA"
     gene            complement(285..1490)
                     /locus_tag="VHX39_18505"
     CDS             complement(285..1490)
                     /locus_tag="VHX39_18505"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3993169.1"
                     /translation="MTNPTGPLKGLRVFDLTRVLAGPTCTQMLGDLGAEVIKIERPGA
                     GDDTRGFAPPFMPGTKESAYFVGVNRNKMSVTLDIGKPEGQEIAQRLIAESDILVENF
                     KVGALEKYGLGYEQLHAKFPRLIYCSITGFGQTGPYAPRPGYDSLIQGMGGVMSLTGE
                     PEGLPQKVGVPVADLFAGLYGCIGILAAIRHRDLTGVGQQIDIGMLDTHVAWLANQGM
                     NYLATGENPARLGNQHPNIVPYQVFPTADGHMVLSIGNDPTFKRFCEAFALTHLLEDA
                     RFATNAARVQNRQLVTDTLTPVMQQHPTNWWIDQLEALKIGCGPINKLAEVFADPHVQ
                     ARQMVLEMDHATGGPMKMIANPVKLSETPPDYRLPPPVLGQHTDQVLSGKLGLDAAAL
                     AALREKGVI"
     gene            1616..3238
                     /locus_tag="VHX39_18510"
     CDS             1616..3238
                     /locus_tag="VHX39_18510"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3993170.1"
                     /translation="MGNAAGYDYIIVGAGSAGCVLANRLTEDAGATVLLLEAGGQDRH
                     PYIQIPLGLGKLQQRKMFDWGYTTEPEPHLNGRRLHIFRGKVLGGSSSINVMAYTRGH
                     RGDFDRWTREGATGWSYADALPYFKRSETWEDGENPWRGGAGPVGTQWSRMQDPIIDA
                     WHEAGRLAGWPTTPDINGADGVGFGRSQFTIRDGRRSSASNAYLRPVLQRPGLTLRTR
                     AQVLRITMQGTRATGVDFVHHGRTQHADATREVILCGGVFNSPQLLMLSGIGPAEQLR
                     ELGIAALADLPAGRNLRDHLAVALIWNRLEPGPFHGQLRIDRAAINMARALLYRDGPA
                     TTLPLGEIAFIKSRPDLEAPDIEFLLAVRTLETRPWFPGWQAAYQDVMGIRPVLLHPR
                     SQGTVTLRSTDPAAPVRIAFNFLSMPEDLAALRNAYHLARDVAGQRPLDRFRGAPVAP
                     APDILTNAQIDAWIRDTVITVNHPLGTCAIGPHGVLDPELRVHGIENLRVVDASALPD
                     MPSAHINAIVMMLAERASDLIRGVPLLAPANV"
     gene            3344..4570
                     /locus_tag="VHX39_18515"
     CDS             3344..4570
                     /locus_tag="VHX39_18515"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3993171.1"
                     /translation="MSDRPPSVEGRSSWVAAGVTLAILTVSYGSPLLIVVGLKPIQEA
                     LGTDRSVIALAGSLVWVGTGLGGIPMGWLADRIGIRAVIGFGAVMISLGLAVSSIGGT
                     IPLYLGHGLLLGLIGNGAIYAPLLIYVSRWFDRRRGAAIALISSGQYIAGVFWPSVFE
                     RGIATYGWQTMMLGYAVVVLVGILPWLPLLHAVPKAVSAGPAISAGRDRAVLGLSPNV
                     VQAVICVAGFCCCIPMAIPSSHLVAFCSDIGIGPVRGAAMLSVLLGCAFISRQFWGSL
                     ADRIGGLRTVMAGSACQAAAIGAFLLTQNETGLFVIAGAYGLGFSGIIPSYSVAIRDL
                     FPSAEAAWRIPTMLFTSMTGMAVGSWLAGRIYDHYASYAPAFATGVAFNLLNLVLIGF
                     LVMRLPRRSGPVLAPA"
     gene            4653..5204
                     /locus_tag="VHX39_18520"
     CDS             4653..5204
                     /locus_tag="VHX39_18520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEX3993172.1"
                     /translation="MPRFERRVPEGDDRERMICADCGHIDYQNPKVIVGTVLTWHGKI
                     LMCRRAIEPRRGYWTLPAGYLELGETLEEGAAREAMEEATADISLDGILGVFSVARIG
                     QVQVIFRGRFADPERPHFASGPESLEVALFAWDEIPWNDVAFPTVHWALNAWNACRSG
                     PLGAPAGNPPTDPRGVHGIGSRP"
     gene            5318..5509
                     /locus_tag="VHX39_18525"
     CDS             5318..5509
                     /locus_tag="VHX39_18525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993173.1"
                     /translation="MPNPNVVHPEEAAQSLSVTVDNGINHRDAPDPGMAFPPGSHYQI
                     DNDKRWLVWPGVTVHVTIP"
     gene            5607..6047
                     /locus_tag="VHX39_18530"
     CDS             5607..6047
                     /locus_tag="VHX39_18530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993174.1"
                     /translation="MRLNRRALRDQLTKPNNEHLPDGIGGTITGGPMEPLGLVEILER
                     GARGASRGGAVSGAAQIVAGGPRQSNKAERGISLSDGSRICFASIAEVSLYRDDDVPM
                     ARHAQTGAARDDEAPVPRWGKPRAKTNDRARTSDPHRTRVLAPV"
     gene            6120..6977
                     /locus_tag="VHX39_18535"
     CDS             6120..6977
                     /locus_tag="VHX39_18535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX3993175.1"
                     /translation="MFKDILVHLDDGPHSATRMKVAVDLAGRQGAHLTGIFVLDIPGS
                     DLFYGAGMPYAGGGGMTEMVNALRADQAAHAEVVAQEFRHAVQLQGLENEWRVVEGDT
                     VGLVALHARYADLTVLGQPNGDEAFKGPSADAVLVNVMLASGRPVLAVPYAGNFEQIG
                     QRVLVAWNASREATRAVNDALPLLQDAKSVTVLAVNPKRGIEGHGDVPAADICLHLAR
                     HGVKAEAAHTIAKDISEGDALLSYAADLGVDLIVCGGYGHSRAREMVFGGVTRTLLQE
                     MTVPMLLSH"
     gene            complement(7134..9677)
                     /locus_tag="VHX39_18540"
     CDS             complement(7134..9677)
                     /locus_tag="VHX39_18540"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3993176.1"
                     /translation="MVQIAAWLLILILLATCTIVLLRLREDALRATESHLSDVALTLA
                     EQADRAVQGMDLVLDGIAQLAVADGAVNAATFDATMSTQEMHKAMQARMIGLPQVNAL
                     ILYGVDGHVVNSTRSWPVPPVNVRNADYFKAIIGDAAVNLFITAPFQYKTDGKWTVFL
                     IRKFRGLDGNAAGLLVAAVELPYFEDFYRSVSVGNDGTISLLRGDGVQLARYPPALTT
                     GQNFMTAQRILGNAIAGTIREPSPFDQTMRVKAARRLTTYPLIMLVTLDQAAALGDWR
                     RMVWVLGLGTVGCCIAILIAATAMGRRWQHREALSQERERSALAEAALMRERERHAED
                     ESRAKSGFLAMMSHEIRTPMNGVLGLTGTLLDTPLNQDQRKTVEAIRDSGDSLLRILN
                     DILDFSKLDSGRMELEEAPFSPATLTENPVSLLGPRAVAKGLKITAICDPDLPDALLG
                     DAGRIRQALINLVSNAVKFTERGSVTIRGACTERDAAGATVVWTITDTGIGIPADRLG
                     RLFGEFSQADASITRRFGGSGLGLAISQKLITQMGGTIVVDSQSGQGSTFTITLRLPI
                     AEMGPETSATPVDVVGEFERRVAGLGRSLRILFAEDNPTNQFVALQMLRGFDVQIDVV
                     ADGLEAVHGASSFLYDVICMDMRMPEMDGLAATRAIRALGGHLATIPIVALTANAFPE
                     DIAACFASGMTGFVAKPVRKETLLAALLTALGTTGSADVDIQAVAGADPGEVALDDAA
                     LARLTDEIGSDGVTELVTMFAEETLVRLQVIADPGLDHARRILEVHSLKGAAASVCAA
                     SLSRRAASLEMHLKNDDTIDSVDTSFLVEAFDAWREAVRITGATETIAA"
     gene            complement(9817..>10317)
                     /locus_tag="VHX39_18545"
     CDS             complement(9817..>10317)
                     /locus_tag="VHX39_18545"
                     /inference="COORDINATES: protein motif:HMM:NF023354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3445 domain-containing protein"
                     /protein_id="HEX3993177.1"
                     /translation="RLTAAIVCFPSRWRLDEKLGRPLAEVHARVPFYGDRLARPVDRF
                     MGHVRAGHIAARLNWSVMDDPTLFQPTGKWRTSYDVTITEQNAGDRLFLRVERQTLRR
                     LPVSGAVLFGIRVHVYRLARAVTTPEAAAGLAAAVRALPDETAHYKSLPMFQTALLGW
                     LDRLAS"
BASE COUNT         1937 a         3263 c         3177 g         1940 t
ORIGIN      
        1 cgctgcgagc atgcgatcga accgctcccg tgacgtaccg gccggcggat cgctggcgcg
       61 gtagcgagca cccacgacct cccacgcctt ggcgtaccag accgcggccg ccgtcttaac
      121 agccggatcg cggatcacca ggaaccgcca ggactggctg ttgccaccgt tggctgcgaa
      181 cgttccggcc tccagcacct tgcgcaacag atcgtcgggc accgggtccg gtttcagccg
      241 gcgcatcgaa cgggtcgagc gcatgatctc gaacaagtcg tccatcagat gacccccttc
      301 tcgcgcaaag cagccaacgc cgcggcatca agacccagct ttccggacag aacctgatcg
      361 gtgtgttgtc ccagtaccgg cggcggcagg cggtaatccg gcggcgtctc cgataatttt
      421 accggattgg cgatcatctt catcggacca cccgtggcat ggtccatttc caacaccatc
      481 tgccgcgcct ggacgtgcgg atcggcaaac acctcggcca atttgttgat cgggccacag
      541 ccgatcttca acgcctccag ttggtcgatc caccaattgg tcggatgctg ctgcatcacc
      601 ggggtcaacg tatcggtcac cagttgccgg ttttgcacac gtgcagcatt ggtggcgaag
      661 cgcgcgtcct ccagcaaatg cgtcagagcg aacgcctcgc aaaatcgttt gaaggtcgga
      721 tcattgccga tcgacagcac catgtgcccg tccgctgtcg ggaatacctg atacggcacg
      781 atgttcggat gctggttgcc aagccgcgcc ggattttcgc cggtggccag atagttcatc
      841 ccctgattgg caagccacgc aacgtgcgtg tccagcattc cgatatcgat ctgctggccg
      901 acaccggtca ggtcgcgatg ccggatcgcc gccagaatgc cgatgcagcc gtacaatccg
      961 gcgaacaaat ccgccaccgg cacgccaact ttctgcggca gtccctccgg ctcaccggtc
     1021 agactcatca ccccgcccat gccctggatc aggctgtcat agccaggccg cggggcgtat
     1081 ggcccggttt gcccgaatcc ggtgatcgag caatagatca gccgtggaaa ttttgcgtgg
     1141 agctgctcat agccgaggcc atatttttcc agcgcaccga ccttgaagtt ttccacgaga
     1201 atatcacttt cggcgatcaa ccgttgcgca atctcctgcc cctccggttt accgatatcc
     1261 agcgtgaccg acatcttatt gcgattgacg ccaacgaaat acgcactctc cttggttccc
     1321 ggcataaatg gcggtgcgaa cccgcgcgta tcgtcaccgg caccaggccg ctcgatcttg
     1381 atcacctcgg cgcccagatc gccaagcatt tgcgtgcagg tgggacctgc gaggacgcgg
     1441 gtaaggtcga acacgcgcag acccttgagg gggccagttg ggttggtcat acttctctcc
     1501 agcttccggg caaacagttt gacgcctatc ctacagtctg accagcgatc tggaaaaatt
     1561 gtccgggcag gttcattgct tggccgacgc gacgtcgaga cgaggtagca acgtcatggg
     1621 caacgcggcc ggctatgact acatcatcgt cggcgccggc tcggccggct gtgtgctggc
     1681 gaaccgcctg accgaagacg cgggagcgac ggtgctgctg ctcgaggccg gcggccagga
     1741 ccggcatccc tacatccaga tcccgctcgg cctcggcaag ctgcaacagc gcaaaatgtt
     1801 cgactggggt tacacgacag aacccgagcc gcacctgaac ggccgccggc tgcacatatt
     1861 ccgcggcaag gtgttgggcg gatcgtcctc gatcaacgtc atggcctaca cccgaggcca
     1921 ccgcggcgac ttcgatcgct ggacgcgcga gggggccacc ggctggtcct acgccgatgc
     1981 cctgccctac ttcaaacgca gcgagacctg ggaggacggc gaaaacccct ggcgcggcgg
     2041 cgctggccct gtgggcaccc aatggagccg gatgcaggat ccgatcatcg atgcctggca
     2101 tgaggccggc cgcctcgccg ggtggccaac cacgccggac attaacgggg ccgacggcgt
     2161 cggatttggc cgcagccagt tcaccatccg cgacggacgc aggtcgtcag cgtcgaacgc
     2221 ctatctcagg ccggtgctgc agcggccggg cctcacgtta cgcacccgtg cgcaggtctt
     2281 gcggataacg atgcagggga cgcgcgcgac cggagtcgac tttgttcacc acgggcgaac
     2341 ccagcacgct gacgccacac gcgaggtcat tctttgcggg ggcgtattca attcgccgca
     2401 attgctgatg ttgtcgggca tcgggccggc cgaacaacta cgcgaactgg ggattgcggc
     2461 actggccgac ctgccggccg ggcgcaatct gcgcgatcac cttgccgtgg cgctgatctg
     2521 gaaccgtctc gagcccggac cattccatgg tcaactacgg atcgaccgag ccgcgatcaa
     2581 catggcccgc gcgctgctgt accgtgacgg acctgcaaca accttgccgt tgggcgagat
     2641 cgccttcatc aaaagccggc ccgatctgga ggcgcccgat atcgagttct tgctcgccgt
     2701 gcggacgctc gagacccgtc cgtggttccc cggttggcag gcggcgtacc aggatgtcat
     2761 ggggatacgg cccgtgctgt tgcatccgcg cagccagggc acagtgacat tacgatccac
     2821 cgatccggcg gcgccggtgc gcattgcgtt taattttctc tcaatgccgg aggacctcgc
     2881 tgcattacgt aatgcttacc atctggcgcg cgatgttgcg ggtcaaaggc cgttggaccg
     2941 gtttcgcggc gcaccggtcg cgccggcgcc ggatattctg accaacgccc agatcgatgc
     3001 ctggattcgc gataccgtca tcaccgtcaa ccatccttta ggtacctgtg cgatcgggcc
     3061 gcacggcgtg ctcgacccgg agctaagagt gcatggcatc gaaaacttgc gggtcgtgga
     3121 tgcctccgcg ctaccggata tgccgtcggc acatatcaac gcgatcgtta tgatgctggc
     3181 cgagcgcgct tccgacctga tccgcggcgt tccattgctg gcaccagcca acgtttagaa
     3241 gcccactggg cggcaaggtt gccggccggc gagtccgggt cttatgttcc cgcgcaacgc
     3301 gccaggcgga aaagcctcgg gcgcgacaag gaaggatgtg tccatgtcag accggccgcc
     3361 cagtgttgag ggccgcagct cgtgggttgc ggccggtgtc acgctggcga tcctgacagt
     3421 gtcttatggc tcgccgttgc tgatcgtcgt cgggttgaag ccgattcagg aagcactggg
     3481 gaccgatcgc tcggtgatcg cgttggccgg gtcgctggta tgggtcggca ccgggctcgg
     3541 cggtatcccg atgggctggc ttgccgaccg gattggcatt cgtgccgtga tcggctttgg
     3601 cgctgtcatg atatcgctcg gcctcgccgt ttcctccatc ggcggcacca tccccctgta
     3661 tctgggccac gggctgttgc ttgggctgat cggcaatggt gcgatctacg cgccgctgct
     3721 gatttacgtc agccgctggt tcgaccggcg gcgtggcgcg gcgatcgcgc tgatttcgtc
     3781 cgggcaatat atcgccgggg tattctggcc ctcggtgttc gagcgaggca tcgccaccta
     3841 cggttggcag accatgatgc tgggctacgc cgtcgtcgtg ctggtgggaa ttctgccctg
     3901 gttgccgctg ctgcacgcgg tgccgaaggc cgtcagcgcc ggaccagcaa tcagcgcggg
     3961 ccgcgaccgg gcggtcctcg gcctgtcgcc caacgtcgtg caggcggtca tctgcgtcgc
     4021 cgggttttgc tgctgtattc caatggcgat cccaagctcg catctggtcg cgttctgctc
     4081 cgacatcggc attgggccgg tgcgcggcgc agcgatgcta tcggtgcttc tgggctgcgc
     4141 tttcatttcg cgccagttct ggggatcgtt ggccgaccgt atcggcggat tgcgcaccgt
     4201 aatggcagga tctgcctgtc aggcggctgc cattggcgct ttcctgctga cccagaacga
     4261 gaccgggttg ttcgttatcg ccggcgccta tggacttggg ttcagcggca tcatcccatc
     4321 ctactccgtg gcgatccggg acctgttccc atccgccgag gcagcgtggc gaatcccgac
     4381 gatgctgttc acctctatga ccgggatggc ggttggcagt tggctcgccg gacgcatata
     4441 cgatcactat gcgtcgtacg ctccggcctt cgcgaccggc gtggcgttca atctgctcaa
     4501 ccttgttctg atcggtttcc tggtgatgcg tttgccgcgt cgcagcgggc ctgtgctggc
     4561 acccgcctga cggatcgccc ttgtaaaacg tcggggtatg agacgccggg ggcgcccttg
     4621 atccgttccg tttcgaaggc caacataccg atatgccccg cttcgaacgc cgagtcccgg
     4681 agggcgacga ccgcgaacgc atgatctgtg cggattgcgg ccatatcgac tatcagaatc
     4741 ctaaggtcat cgtcggcacg gtgctgacat ggcacggcaa gatcctcatg tgccgtcgcg
     4801 ccatcgagcc gcgccgcggg tactggacgc ttcctgccgg ctatctggag cttggcgaga
     4861 cattggagga aggcgcggca cgggaagcca tggaggaggc caccgccgat attagcctgg
     4921 atggcatcct cggcgtgttt agcgtggccc ggatcggcca ggtgcaagtg attttccgtg
     4981 ggcggttcgc cgacccggag cggccgcatt ttgcctccgg tcccgaaagc ctcgaggtcg
     5041 cgctgttcgc ctgggatgag atcccgtgga acgacgtcgc cttccctacc gtccattggg
     5101 cattgaacgc atggaatgca tgccggtccg gcccattggg cgcaccggcc ggtaacccgc
     5161 ccaccgatcc gcgtggcgtg catggcatcg ggtccaggcc gtgaggggac cggcggtcgt
     5221 ttcgctcgtg atgttcgctg tggcagcgaa tgccgcagaa ccacctcttc cggttccacc
     5281 tattccaccg gccagaccgc cgctgccgtt ggccccgatg ccgaatccga acgtcgtgca
     5341 cccggaagaa gccgcgcaga gcctgtccgt caccgtggac aacgggatca atcatcgtga
     5401 tgcacctgac ccgggcatgg ctttcccgcc cggatcgcac taccagatcg acaatgacaa
     5461 gcgatggctg gtgtggccgg gggtcacggt gcacgtgacg atcccttaat gttccgccat
     5521 taacaatttg ttgacctata tcgccgacac tctgatctgg cgggcgcgat gcttgttcac
     5581 gcccgattcg gcagagggat acgacgatgc ggctgaaccg gcgcgcgctg cgcgatcaat
     5641 tgacgaaacc gaacaacgag catctgccgg atggcatcgg tggcacgatt accggcgggc
     5701 caatggagcc acttggcctg gtggaaatcc tggagcgcgg ggcgcgcggg gccagccgtg
     5761 gtggcgcagt ttcaggtgct gctcagattg tggcgggcgg tcctcgccaa tccaacaagg
     5821 cggaacgcgg catttcgttg tctgacggca gcaggatttg cttcgcctcg atcgcagagg
     5881 tcagcctgta tcgcgacgac gatgtcccca tggcgaggca tgctcagacc ggggcggcca
     5941 gggacgacga ggctccggtg ccgagatggg gcaagcctcg tgcgaagaca aacgaccggg
     6001 cgcgcacctc cgatccgcac cgtacacggg tcctcgcacc ggtctgattc agatcaaggc
     6061 gccaaattcg ccagaacctg atactgttgc cataccggca acagaggatg gggaagacga
     6121 tgttcaagga tatcctggtc catttggatg atgggccgca cagcgccacc agaatgaagg
     6181 tcgcggtcga tctggcaggg cgacaggggg cgcatctgac agggattttc gtgctggata
     6241 ttcccggttc ggacctgttc tacggtgccg gcatgcccta cgccggcggc ggcggcatga
     6301 ccgaaatggt gaatgctttg cgtgccgatc aggcggctca cgccgaggtg gtggcgcagg
     6361 aattccggca cgccgtgcag ctacaggggc tcgagaacga atggcgggtc gtcgaaggcg
     6421 acactgtcgg cctggtcgca ctgcacgcac gctatgccga tctgacggtc cttggccaac
     6481 ccaatggcga cgaggcgttc aaaggaccca gcgcggacgc agtgttggtg aatgtgatgc
     6541 tggcgtcggg gaggccggtt ctggccgtgc catacgcggg aaactttgag cagatcggcc
     6601 aacgggtact ggtcgcctgg aacgcatccc gtgaggcgac ccgtgcggtg aatgacgcat
     6661 tgccgctgct gcaagacgcg aaatccgtca cggtgctggc ggtcaatccg aagcgcggga
     6721 tcgaaggcca tggcgacgtg ccggcagcgg atatctgcct tcacctggct cgccacggcg
     6781 taaaggcaga ggcagcgcac accatcgcca aagacatcag tgagggcgat gccttgctgt
     6841 cctacgcggc cgatctcggg gtcgacctga tcgtgtgcgg gggctatggg cattcacggg
     6901 cgcgagaaat ggtgttcggc ggtgtgaccc gcacgttgct gcaggaaatg accgtgccga
     6961 tgctgctgtc gcactgagca acggcggttt ggaccagacc gcctggcatg ccgaggaagc
     7021 gatgggctgt ggcgcgcacg aacggtgatt tgtcgggaac gcgagatcgt cgcatctgca
     7081 accgaaccga cacatggttc ccgcgtggcc ggcgcgtctt ccgcgtcgcc gtgtcaggcg
     7141 gcaatcgttt cggtggcgcc agtgatacgc actgcctcgc gccatgcgtc aaacgcctca
     7201 accaaaaacg aagtgtcgac gctatcgatc gtgtcatcgt tcttcaggtg catctccagg
     7261 ctcgcagcac ggcgcgacaa tgacgcggcg cataccgatg ctgcggcgcc cttgagacta
     7321 tgaacctcca ggatacgcct cgcgtgatcc aacccggggt cggcgatcac ctgcagccga
     7381 accagagtct cctcggcgaa cattgtgacc aattcggtga cgccgtcact gccaatctca
     7441 tcggtcaaac gagcgagtgc ggcatcgtca agcgccacct ccccgggatc tgctcccgcc
     7501 actgcctgaa tgtccacatc cgctgagcct gtggtaccga gtgcagtaag caacgccgcg
     7561 agcaatgttt ccttgcggac cggcttggcg acgaatcctg tcatcccgga ggcgaaacaa
     7621 gcagcgatgt cctcggggaa tgcattggcg gtcaaggcga cgattggaat cgtggcgagg
     7681 tgtccgccca aagcgcggat cgcccgtgtc gctgccagac catccatttc cggcatccgc
     7741 atatccatgc agataacgtc gtagaggaaa ctggatgcgc catgcaccgc ctccaaccca
     7801 tccgccacaa catcgatctg aacgtcaaag ccgcgcagca tttgcaatgc gacaaactga
     7861 ttcgtgggat tgtcctcggc gaacaggatc cgcaaggagc ggccaagacc ggcaacccgc
     7921 cgttcaaatt cgccaacgac atcaaccgga gtcgctgacg tctcgggtcc catttccgca
     7981 atcggcaaac gcagggtgat cgtgaacgtc gacccttgcc cggattgcga gtcgacaacg
     8041 atggtgccac ccatctgcgt aatgagtttc tggctgatcg cgaggccgag gccggatccg
     8101 ccgaacctgc gggtgatcga tgcatcagcc tggctgaact cgccaaacag ccggcccaga
     8161 cgatcggctg ggatgccgat gccggtgtcg gtgatggtcc atacgaccgt cgcaccagcc
     8221 gcatcccgct cggtgcacgc gccgcggatc gtcactgaac cacgctcggt aaactttact
     8281 gcattcgaga ccaaattgat caatgcctga cgaattcgcc cggcatcccc cagaagcgca
     8341 tccggcaaat cgggatcaca gattgccgtg atcttcagtc ctttcgcgac ggccctgggg
     8401 cccagcagac tgaccggatt ctcggtcaac gtcgccggcg agaacggcgc ttcctccaac
     8461 tccatcctgc cactgtcgag cttcgaaaag tccagaatat cgttcagaat ccgcagcagc
     8521 gagtcgcccg aatcgcggat cgcctcgacc gtttttcgtt gatcctggtt cagcggcgta
     8581 tcgagaagag tcccggtcag acccagcacg ccattcatcg gcgtacgaat ttcgtggctc
     8641 atcatggcga ggaagcctga tttcgcccgg ctttcatcct cggcgtgtcg ttcccgctct
     8701 cgcatcagtg cggcttcggc gagcgcgctt ctctcgcgtt cctggctgag cgcttcgcga
     8761 tgctgccaac gtcggcccat cgccgtggca gcgatcagga ttgcaatgca gcacccgacg
     8821 gtaccaagcc cgaggaccca gaccattcgc cgccaatcgc caagcgcggc ggcctgatcc
     8881 aacgtcacga gcatgatcaa cggataggtc gtcagccgcc gcgccgcctt cacccgcatc
     8941 gtttgatcga acggactggg ctcgcggatc gttccggcaa tggcattgcc gagaattcgt
     9001 tgggcggtca tgaaattctg accggtcgtg agtgccggcg gatagcgtgc aagttggaca
     9061 ccgtcgccgc gtagcagcga gatcgtgccg tcattaccga ccgaaaccga acgatagaaa
     9121 tcctcgaaat acggcagttc gaccgcggca acgagcaggc ccgcagcatt gccgtccaga
     9181 ccacggaact tacgtatcag gaacacagtc catttgccgt ccgttttgta ttggaatggt
     9241 gccgtgatga acagattcac cgccgcatcg ccgatgattg ctttaaaata gtcagcattg
     9301 cgtacgttaa caggcgggac cggccaggac cgggtactgt tcacgacatg cccgtcaacg
     9361 ccatacaaaa tcaacgcatt gacctgaggc aagccgatca ttctcgcctg catcgcctta
     9421 tgcatttcct gagttgacat ggtcgcgtcg aatgtcgcgg catttactgc cccatcagcg
     9481 acagcgagtt gtgcgattcc gtccagcacc aggtccatac cctgtaccgc ccgatctgcc
     9541 tgttcggcca acgtcagagc aacatcgctc aaatgacttt cagttgcccg cagcgcgtct
     9601 tcccgcagcc gaagcaaaac gatcgtgcag gtcgcaagca aaatcagaat cagcagccag
     9661 gcagcaatct ggaccaatcg gaccggggtt cggacgctgg ggtggtgcgc agattgtgac
     9721 atacaaaagt cgccattccg gatagccacc agaatcgcac aaaagaatga acggaagctt
     9781 aatgccagcc aaaccagcgc gcgcaaaccg caagcgtcag gatgccaaac ggtccagcca
     9841 cccaagcagc gcggtctgga acatcggcag acttttgtaa tgcgcagttt catccggcag
     9901 cgcgcgcacc gcggcggcaa ggccggccgc ggcctcaggc gtcgttaccg cgcgagccaa
     9961 ccgatacaca tgcaccctta tgccgaacag gaccgctccg ctgaccggca aacgtcgaag
    10021 agtctgccgc tcgacccgca ggaacaggcg gtctccggca ttttgctcgg tgatcgtcac
    10081 atcgtacgag gtgcgccact taccggttgg ctgaaacagt gtcggatcgt ccatcaccga
    10141 ccagttcagc ctggccgcga tatggccggc acgaacatgg cccatgaagc ggtcgaccgg
    10201 ccgcgccaac cgatcgccgt aaaacggcac ccgggcgtga acctcggcga gcgggcgacc
    10261 cagcttctca tcgaggcgcc agcgactggg aaaacacaca atggcagcag tcaggcg
//
LOCUS       DATAVD010000970         2722 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_280317, whole genome shotgun sequence.
ACCESSION   DATAVD010000970 DATAVD010000000
VERSION     DATAVD010000970.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2722
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280317"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..716)
                     /locus_tag="VHX39_18550"
     CDS             complement(<1..716)
                     /locus_tag="VHX39_18550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3993178.1"
                     /translation="MSASVTQADMASRSRPMTGEEKKVILASSLGTVFEWYDFYLYGS
                     LAVIIGAKFFSQFPESTRNIFALLAFAAGFLVRPFGALVFGRIGDLVGRKYTFLITIT
                     IMGSSTFLVGLLPTSDQIGFAAPVILIALRMLQGLALGGEYGGAATYVAEHAPQGRRG
                     FYTSWIQTTATLGLFLSLLVILFTQSAMTTAEFQGAATSTMAIAGWRIPFLVSILLLA
                     VSVWIRLQLGESPAFLKMKA"
     gene            complement(873..1628)
                     /locus_tag="VHX39_18555"
     CDS             complement(873..1628)
                     /locus_tag="VHX39_18555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3993179.1"
                     /translation="MQIRFDDQTVAVTGAGHGFGRAIARRFAELGARVFATDVTEATL
                     AETGASGGITPLVVDLRDRVASANWIAGIEQATGGAIDVLVNNGGGVAGQTNLPIEDV
                     ADADWNVIFDISVNAAFVLCRAAAPGMKRRGSGRIINISSGAGLQASLTGIQAYCSAK
                     HAVVGLTRQLAHELGPFGITVNSVAPGFMRTNQASELQWASYGADGQRSLLDRIAMKR
                     LGTADDIANAVIFFASDLAGFVSGQILQVDGGR"
     gene            complement(1719..1922)
                     /locus_tag="VHX39_18560"
     CDS             complement(1719..1922)
                     /locus_tag="VHX39_18560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993180.1"
                     /translation="MTEPGPDPVRDREDADRRTAGLAAIVVVLLLLIGGLLLTQTLRK
                     KSQLEDCLMAGRRDCDSLLNGSR"
     gene            2143..2694
                     /locus_tag="VHX39_18565"
     CDS             2143..2694
                     /locus_tag="VHX39_18565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010503055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2 family
                     protein"
                     /protein_id="HEX3993181.1"
                     /translation="MERSRGLYEALIRAIAHQQLHGKAAEAILGRFVALWPDETFPSP
                     DRVLDTDDSILRACGFSAAKLAAVQDICAKTLDGTVPTRRQAMRLTDVELIERLTTIR
                     GVGRWTVEMLLIFTLGRPDVLPVDDFGVREGYRVLFEMDLQPKPRALAELGLAWAPHR
                     SMATWYLYRAVEEARRQGPSSRA"
BASE COUNT          559 a          834 c          838 g          491 t
ORIGIN      
        1 tcggctttca tcttcaggaa tgccgggctt tcgccgagtt gcaggcgaat ccagaccgac
       61 accgccagca gcaggatcga gaccaggaac ggaatgcgcc agccggcgat cgccatcgtg
      121 gaagtcgctg caccctggaa ctcggcagtc gtcatggcgg actgagtgaa caatatgacc
      181 aacagggaca agaacagacc aagtgtcgcg gtggtctgaa tccaactggt ataaaagcca
      241 cggcggcctt gtggggcatg ctcggcgaca taagtcgcgg caccgccata ctcgccgcca
      301 agcgccagtc cttgcagcat gcgcaacgcg atcaggatca ccggcgcggc gaagccgatc
      361 tggtcggacg taggtaacag gccaacaagg aacgtcgatg agcccatgat cgtgatggtg
      421 atcaggaatg tatatttccg gccgacgagg tcaccgatgc gaccaaacac cagtgcgccg
      481 aacgggcgga ccagaaagcc cgccgcgaac gccagcagtg cgaagatgtt gcgggtcgac
      541 tccggaaact gactgaagaa cttggcgcca atgatcacgg cgagcgagcc ataaagataa
      601 aagtcgtacc attcgaacac cgtgccgagc gacgatgcga ggatgacttt cttttcttcg
      661 cccgtcatgg gacgagaccg gctggccata tcggcctggg tcacggatgc actcatggtc
      721 gcgtttacct tcccaattgg tgtggtcttt tgacctggag cggctcattg agggactcgg
      781 ccgcaggctt tcattcatag cattctgaca atccaaagca aatatgcctt tgcgcaatgc
      841 gttgccggct ctgacatcga ctgcgcgcaa ccctaccgac cgccgtccac ctgaagaatt
      901 tggccgctca cgaacccggc gaggtcggac gcaaagaata tcaccgcgtt ggcgatatca
      961 tcagccgtgc caagacgttt catcgcgata cggtccagca acgaccgctg gccgtcggca
     1021 ccgtaactgg cccattgcag ctcgctcgcc tgattggtcc gcatgaaccc gggggcgacc
     1081 gaattgacgg tgatgccgaa cggccccagt tcatgcgcca actgtcgcgt caggccgacg
     1141 acggcgtgct tggcggaaca atacgcctga attccggtca gcgatgcttg caggccagcg
     1201 cctgaactga tgtttatgat gcggccgctg ccgcgtcgtt tcatccccgg ggcggcggcg
     1261 cggcacagca caaacgcagc attgacgctg atgtcgaaga tcacattcca gtccgcatcg
     1321 gcaacgtctt caatcggcag gttggtttgt ccggctactc cgccgccatt gttcaccagc
     1381 acgtcgatgg caccaccggt ggcttgctcg atcccggcga tccagttcgc cgaagctacc
     1441 cggtcgcgca gatcaacgac cagaggcgta attccaccgg acgcaccggt ttccgccaat
     1501 gtcgcttcgg tcacgtcagt ggcaaaaaca cgtgcaccaa gttcggcgaa acggcgggca
     1561 atggcacggc caaagccgtg acccgcgccg gtaaccgcaa cggtttgatc gtcgaagcga
     1621 atttgcattg tgacgtggct ccatggcgtg acgaaacact gccatggtgc tcgcgtgcgc
     1681 cggttcccgc cagcacctta accggcgacg gttgtgcgtc agcgcgatcc gttcagaagc
     1741 gaatcgcagt cccgccgacc ggccatcagg caatcctcaa gctggctctt cttgcgcaat
     1801 gtctgggtca acaacaggcc accaatgagc agcagcagca ccaccacgat cgcggcaagg
     1861 ccagcagtac ggcgatccgc gtcttcgcgg tcgcggactg gatcgggtcc aggctcagtc
     1921 atcgtattcc cagcaagtga tcggtcgcag gaatttaaga taattggcac accaactcgc
     1981 caatgggggc accagtgaca aggttgcacg ctgacctggg cccgtccata agcgggcatg
     2041 ccccgggccg ccctcactct ccacgagtcc gctcaacatc tgagccgcgt atgcccacgc
     2101 ttcgcggcgt tgatcggacg cgtcggcccg ccaggtttgc gcgtggaacg tagccggggt
     2161 ttgtacgagg cactgatccg ggcaatcgcc catcagcagt tacacggcaa ggcggcggaa
     2221 gcgatcctgg ggaggttcgt tgcactctgg ccggatgaaa cattcccatc gccggatcgc
     2281 gtgctcgaca ccgacgacag catcctgcga gcctgcggtt tctccgcggc gaagttggcg
     2341 gcggtgcagg acatatgtgc gaagacgctg gacggcaccg taccgacgcg acgccaggcg
     2401 atgcggctga ctgacgtgga attgatcgag cgcctgacga ctattcgcgg cgtcggccgt
     2461 tggaccgtgg aaatgttgct gatttttacg ttgggccggc cggacgtcct accggtcgac
     2521 gatttcggcg tccgcgaggg ctaccgcgtg ctgttcgaga tggacctgca gccaaagccc
     2581 cgtgcgctcg ctgaactggg actggcatgg gcgccgcatc ggtcgatggc gacctggtac
     2641 ctttaccgcg cggtagagga ggcgagacgg cagggaccat ccagccgggc gtaggtgggc
     2701 agcgttggcc ggcgagttgc tg
//
LOCUS       DATAVD010000971         1839 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2513718, whole genome shotgun sequence.
ACCESSION   DATAVD010000971 DATAVD010000000
VERSION     DATAVD010000971.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2513718"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1161
                     /locus_tag="VHX39_18570"
     CDS             <1..1161
                     /locus_tag="VHX39_18570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3993182.1"
                     /translation="HCYDSLMDEADDDYVWPEFDENTASALCYTSGTTGRPKGVLYSH
                     RSTILHAYAVALPDVLDLRATSRVLPVVPMFHVNAWGMPYAAALTGAALLLPGRHLDG
                     ASLAAFCNAERATLTCGVPTVWLGLLQHLRSSGERLETVQRIMTGGSAAPPLLIDAFR
                     DEYGVAVEHGWGMTELSPVGTYNAPKVAQAGLAGEAATRHMLKQGRVLAGVDMKIVDG
                     DGKELPWDGKAFGDLKVRGSWVASAYYGDAAGSALDADGWFATGDVATIDADGFMEIT
                     DRSKDVIKSGGEWISSIALENIAVSHPDVAEAAVIAARHEKWDERPLLLVVPRPGHAI
                     DTGSVLSSFEGKVAKWWLPDEVIVVADLPHTATGKIQKLTLREHYRDHYLAK"
     gene            1305..>1839
                     /locus_tag="VHX39_18575"
     CDS             1305..>1839
                     /locus_tag="VHX39_18575"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HEX3993183.1"
                     /translation="MSQPLNQLSESIAVLVAEAAPGLTAIRIGANRYVTGFLWRSDLI
                     VTTDQALPAAATYTIVLSTGALISGQPGARDPSHNLASVRLDVPVPASSPEPARIATI
                     GALVLALGANFDGSPTVRLTTIHGFPRSPGGGSAAAITLDLAGERVSPGGMVLDAEGR
                     LLGMTSASPSGDAVVVPH"
BASE COUNT          314 a          562 c          616 g          347 t
ORIGIN      
        1 cattgttacg attccttgat ggatgaagct gacgacgact acgtttggcc ggagtttgac
       61 gagaatactg ccagcgcact ctgttatacc tccggcacga ccggacggcc gaaaggcgtg
      121 ctgtacagcc atcgctcgac catcctgcac gcgtatgcgg tggccttgcc cgatgtactg
      181 gacctgcgcg ccacttcccg cgtcctgccg gtggtaccga tgtttcacgt caacgcctgg
      241 gggatgccat atgccgccgc cctgaccgga gccgcgttgc tgctgccggg ccggcatctg
      301 gatggcgcca gcctcgccgc attctgcaat gccgagcgag ccaccctcac ctgcggcgtg
      361 cccaccgttt ggctcgggct tttgcagcat ttgcgctcca gcggggagcg gttggagaca
      421 gtgcaacgca tcatgaccgg cggctcggct gctccgccac tgctgatcga tgcattccgc
      481 gatgaatatg gtgtcgcggt cgagcacggc tggggcatga ccgaactgag cccggtcggc
      541 acctataacg cgccgaaagt cgcgcaagcc gggctggctg gcgaggcggc gacacggcat
      601 atgctgaaac agggccgtgt tctggctggc gtcgacatga aaatcgtcga tggcgacggc
      661 aaggaactgc catgggacgg caaggcgttc ggcgatctga aagtgcgcgg gtcgtgggtc
      721 gcgagtgcct attacggcga cgcggcgggt agcgcactcg atgccgacgg ctggttcgcc
      781 accggcgacg tggcaaccat cgatgccgac ggcttcatgg aaatcaccga ccgatcgaag
      841 gacgtgatca aatcgggcgg cgaatggatc agctcgattg cactggaaaa catcgccgtg
      901 tcgcaccccg atgtggcgga ggccgcggtg atcgctgccc gtcatgagaa atgggatgag
      961 cggccgttgc tgttggtggt gcctcggcct ggccatgcga tcgataccgg atccgtgctg
     1021 agcagcttcg aaggcaaggt ggcaaagtgg tggctgcctg acgaagtgat cgtggtggcc
     1081 gatttgccgc acaccgctac cggcaaaatc cagaaattaa cgttgcgcga acattatcgc
     1141 gatcattacc tggcgaagtg acctgagctg ctgattccgt cccatggaaa tgattccaaa
     1201 atggccggcg ttctggcaaa cagcacgaca cagaggccag atcgtcgggt tacctcgtcg
     1261 gtttggcggg cccggccgtc gccctccctc gcatggatgg gtcgatgtcg cagccgctga
     1321 accaactgtc cgagtcgatc gcggtgctgg tggcggaagc tgcccccggc ctgacggcga
     1381 ttcggatcgg cgccaatcga tatgtcaccg ggtttttgtg gcgtagcgat ctgattgtga
     1441 cgaccgatca ggcgctgccg gcggccgcga cctacacgat cgtgttgtcc accggtgccc
     1501 tgatttccgg ccaacccgga gcccgcgacc cgagccacaa tctggcgtcg gtgcggttgg
     1561 acgtcccggt cccggcctcg tcgcccgagc cagcgcgtat tgccacgatc ggtgccctcg
     1621 tgttggcctt gggcgccaac ttcgacggca gcccgacggt gcggctgacg acgatccacg
     1681 gcttcccgcg gtcgccgggg ggtggatcgg ccgcggcgat taccctcgac cttgcgggcg
     1741 agcgggttag tcctggcggc atggtcctcg atgcggaagg acggctgctc ggcatgacca
     1801 gcgcttcgcc gagtggtgat gcggtggtcg tgccacacg
//
LOCUS       DATAVD010000972         2254 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_840877, whole genome shotgun sequence.
ACCESSION   DATAVD010000972 DATAVD010000000
VERSION     DATAVD010000972.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2254
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_840877"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..939)
                     /locus_tag="VHX39_18580"
     CDS             complement(<1..939)
                     /locus_tag="VHX39_18580"
                     /inference="COORDINATES: protein motif:HMM:NF037611.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase domain-containing protein"
                     /protein_id="HEX3993184.1"
                     /translation="MLFNAPLLAAAFCLSTSPVLAAASPLADALPMVGTGGHGHTYPG
                     ATVPFGFVQASPDTRNQGWDACSGYHYSDSTIMGFSHTHLSGTGCTALGDLLIMPVTG
                     DLNDPAGYQPLKAERFKSAFSHDNEVAQPGYYRVLLDKYNVLAELTATPHAAMHRYTF
                     PASSHSHLLVDLVYGIGDHPTDAELTVAKNNLITGYRRVDGWAKGRMIYFAVETSKPF
                     KDYGLEVDDQPLLARQADARGKNVRAHLDFKTSKGQQILLRVGLSPTSVEEAVKNLRA
                     EIPSWDFDAVRAAAQISWSENLSRIQIESSNPDIRQT"
     gene            complement(1092..>2254)
                     /locus_tag="VHX39_18585"
     CDS             complement(1092..>2254)
                     /locus_tag="VHX39_18585"
                     /inference="COORDINATES: protein motif:HMM:NF037833.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993185.1"
                     /translation="TSGQVLQVYQASFSTGAPFIVTNVVTPFLVMPGYSVSNSVAVIG
                     QAPLSYHWTYNGATLADNGHITGSQTNVLMIASATTNDGGNYQVIITNSLGSATSSVA
                     PLIIGSLPIVFNGSGPGWRLSQSGTYSAPGITNGLLTLTDGGGSEARSFFFQYPQYIG
                     GFIASFTYQAGGNKAADGAAFCIQNDPRGPSALGGAGGGLAVSGIIPSAELELHIYSP
                     GGVGFGFNTNGNTGGYITNLPVNLASGDPIGVSIYYANDQMSLTMTDAVAATSYSTNF
                     TVGDLTAVVSNMVAYVGFTGASGGSTAVQTISNFTFVSIPPVGIESLTTSSGQVIWPG
                     VITGYKLQQNGDLTSGNWQYMTNSVSVSNGLNRVAVPMNSSNVFYRLILPSP"
BASE COUNT          436 a          620 c          761 g          437 t
ORIGIN      
        1 cgtctggcgg atgtccggat tggaggactc gatttgaatg cgcgacagat tttcgctcca
       61 cgaaatttga gcggccgcgc ggacggcatc gaagtcccac gaagggatct cggcgcgtaa
      121 atttttaacg gcttcctcga cgctggtggg agaaaggccg acgcgcaaca gtatctgctg
      181 ccccttggag gtcttgaaat cgagatgggc gcgaacgttt tttccccggg catcggcctg
      241 gcgggccagc agcggctggt catccacttc cagcccgtaa tccttgaacg gcttggaagt
      301 ttccacggcg aaataaatca tcctgccctt ggcccagccg tccacgcggc ggtagccggt
      361 gattaaattg ttcttcgcca cagtgagctc cgcgtcggtc gggtggtcgc caatcccata
      421 gaccaggtcc accagcaaat ggctgtgcga cgaggccggg aaggtgtagc ggtgcatggc
      481 ggcgtgggga gtggctgtca gttcggcgag cacgttatat ttatcgagca ggacacggta
      541 atagccgggt tgcgccactt cgttgtcatg ggagaaggcc gatttaaacc gctccgcctt
      601 caatggctgg tagccggcgg gatcattcag atcaccggtc acgggcatga tcagcaaatc
      661 tcccaaggcg gtgcagccgg tgcccgaaag gtgggtgtgg ctgaagccca tgatggtgga
      721 atcggagtaa tgatagcccg agcaggcatc ccagccctgg ttgcgcgtat cggggcttgc
      781 ttgcacgaag ccaaagggca cggtggcgcc gggatacgtg tggccgtggc cgccggtgcc
      841 gaccatgggc agagcgtcag cgaggggtga agccgcggcg aggaccgggc tggtcgacag
      901 gcagaaggcc gcagccaaca ggggggcgtt gaataacatt ttcatgtgac aaagtatttg
      961 aacaggaagg gcacaaacac gaacccctcc cgcgtgcaat gcgggagggg ccgtgcggct
     1021 ggtgccattt tctagtccaa gaatgactgg gtgcttttag cttttaaagc tgtcgcgcgt
     1081 gggtcattcg cctacgggga cggcaggatc agccggtaga acacgttgct gctgttcatc
     1141 ggcaccgcga cccggttcaa gccgttgctg acgctcaccg agttggtcat gtactgccag
     1201 ttgccgctgg tgaggtcgcc attctgctgg agcttgtatc cggtgatgac gccgggccag
     1261 atgacctgtc cggaactggt ggtaaggctc tcaatgccca ccggcgggat gctcacgaac
     1321 gtgaagttcg agatggtttg cacggcggtg gagccgccgg acgcgccggt gaacccgacg
     1381 taggccacca tattgctcac caccgcggtc aggtcgccaa ccgtgaagtt ggtgctgtat
     1441 gaagtggctg ccaccgcgtc ggtcatggtc aacgacatct ggtcgttggc gtaatagatg
     1501 gacacgccga tcggatcgcc gctcgccaga ttgacgggca ggttagtgat gtaaccaccg
     1561 gtgtttccat tggtgttgaa gccaaagccc acgccgccgg ggctgtagat gtgcaattcc
     1621 agttcggcgc tgggaatgat gccgctgacc gccaggccgc cgccggcgcc gccgagggcg
     1681 gacggtcccc gcggatcgtt ctggatgcag aaggccgccc catcggccgc cttgttgccg
     1741 ccagcctggt aggtgaacga ggcaatgaag ccgccgatgt attgtgggta ctggaagaag
     1801 aagctccgcg cctcgctgcc gcctccatcc gtgagggtca gcaggccgtt ggtgatgccc
     1861 ggcgcagaat aagttccgct ctggctcagc cgccaacccg ggccgctgcc attgaagacg
     1921 atcggcaggc tgccaatgat gagcggcgcc acgctgctgg tggcggagcc aaggctgttg
     1981 gtaatgatga cctggtaatt gccgccgtca ttggtcgtgg cgctggcaat catgaggaca
     2041 ttggtttggg aaccggtgat gtggccgttg tccgccaggg tcgcgccgtt ataggtccag
     2101 tggtaagaca gcggggcctg gccaatcact gccacggaat tcgagaccga gtagccgggc
     2161 atgaccagga agggcgtcac gacattggtg acgataaacg gcgcgccggt ggagaaggat
     2221 gcctgataga cctgcaacac ctgaccggac gtga
//
LOCUS       DATAVD010000973         2807 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3630907, whole genome shotgun sequence.
ACCESSION   DATAVD010000973 DATAVD010000000
VERSION     DATAVD010000973.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2807
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3630907"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1158)
                     /locus_tag="VHX39_18590"
     CDS             complement(<1..1158)
                     /locus_tag="VHX39_18590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014415855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HEX3993186.1"
                     /translation="MPSLPGLNFDLGDNADMLRASVEAFAAVEIAPRAAAIDRDNAFP
                     MDLWPKMGALGVLGVTAPEDFGGAGMGYLEHVVAMEEISRASASVGLSYGAHSNLCVN
                     QISRNGSDAQQRRYLPGLIDGTRVGALAMSEPGAGSDVVGMRTRADRRGDRYVLNGSK
                     MWITNGPDADVLVIYAKTDIAAGPRGITAFLVEKGFKGFSTAQKLDKLGMRGSNTCEL
                     VFEDCEVPEENVLSTVGRGVNVLMSGLDYERVVLAAGPIGIMQACMDAVMPYVHERKQ
                     FGQAIGEFQLMQGKLADMYTTMNAARAYVYAVAKACDRGETTRKDAAGAILYAAEKAT
                     WMALEAIQALGGNGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGRELFAE"
     gene            complement(1261..1653)
                     /locus_tag="VHX39_18595"
     CDS             complement(1261..1653)
                     /locus_tag="VHX39_18595"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010666394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEX3993187.1"
                     /translation="MPNSSVGPRGELSLRTVAMPADTNPAGDIFGGWIMSLMDLAAGV
                     AAGTRAKGRVATAAVSNLSFLQPVKVGDVVCVYTDITRTGRTSITVGVESYVLRRNQG
                     ERVRVTAAEFVLVAVDDHGVPRTLPPEG"
     gene            1685..2461
                     /locus_tag="VHX39_18600"
     CDS             1685..2461
                     /locus_tag="VHX39_18600"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX3993188.1"
                     /translation="MTEILVRHDSDGIATLTLNRPAARNALSMGLMESLDGELAGIAE
                     DRSVNVVIIAANGPAFCAGHDLREIRATPNRAAYEQVFALCSRLMQRIVRLPKPVIAQ
                     VHGVATAAGCQLVASADLAVAADTARFATPGVDIGLFCSTPMVALSRAVGRKAAMEML
                     LTGEAVSALRARELGLVNRVVPEAELHDATRALAAQIAAKSPLSVAIGKEAFYRQAEM
                     DLSRAYNYASEVMTRNMLARDAEEGIDAFLAKRQPQWTGT"
     gene            2497..>2807
                     /locus_tag="VHX39_18605"
     CDS             2497..>2807
                     /locus_tag="VHX39_18605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEX3993189.1"
                     /translation="MTDPYEILGVERTADEAAIRAAYRKLAKKHHPDVNPNKPDAASR
                     FGEISSAYDLLSDKDKRARFDRGEIDAEGHERQQQRQYYRDAPGQERYDPAGGFSQED
                     L"
BASE COUNT          481 a          967 c          834 g          525 t
ORIGIN      
        1 ctccgcgaac agctcacgcc caatcagcat gcgccggatc tcgctcgtcc cagcgccaat
       61 ctcatacagt ttcgcgtcgc gcaacagccg tccggtcgga tagtcattga tgtaaccatt
      121 tccgcccagc gcctggatcg cctccagcgc catccatgtg gccttttccg ccgcgtagag
      181 aatggccccg gcggcgtcct tgcgggtggt ttcaccgcgg tcgcacgcct ttgccacggc
      241 gtagacgtag gccctggcgg cgttcatcgt cgtgtacatg tccgccagct tgccctgcat
      301 caactggaat tccccgatcg cctggccgaa ttgcttacgt tcatgcacat agggcatcac
      361 ggcgtccata caggcttgca tgatcccgat cggtcctgcc gccaggacga cgcgctcata
      421 atcgagcccg ctcatcaaca cgttcacgcc gcgtccgaca gtcgaaagaa cgttttcctc
      481 cggcacctcg cagtcttcga acactaactc gcaggtgttc gatccgcgca tccccagctt
      541 gtccagcttc tgtgcggtgg agaatccctt gaaccccttt tccaccagaa acgcggtgat
      601 cccgcgtggc ccggcggcga tgtcggtctt tgcgtagatc accagcacgt ccgcgtccgg
      661 cccgttggtg atccacatct tgctgccatt cagcacatag cgatcgccgc ggcgatccgc
      721 ccgcgtgcgc attcccacga cgtccgatcc cgccccaggc tcgctcatgg ccagcgcgcc
      781 gacccgggtc ccgtcgatca agcccggcag gtagcgccgc tgctgcgcgt ccgatccgtt
      841 gcgggaaatc tgattgacgc acaaattcga gtgtgcgccg tacgacaggc ccaccgaggc
      901 cgatgcgcgg gagatttcct ccatcgccac cacgtgctcc agatagccca tgccggcgcc
      961 gccgaagtcc tcgggcgccg tcacgcccag cacacccagc gcgcccatct tcggccacag
     1021 gtccatgggg aacgcgttgt cgcggtcgat agcggccgct ctcggcgcga tctccactgc
     1081 cgcgaacgcc tcgaccgagg cgcgcagcat gtccgcattg tcccccagat cgaagttcaa
     1141 tcccggcagg ctgggcatgt gcacgtttcc tttccaaata ccgagccaca ctgcctcagc
     1201 ctgccgccgt cgccaagcag gctcgatccg ggctcgttgt ctcggctggg atgcgtggcc
     1261 ttacccttct ggcggcagtg tccgggggac gccgtgatcg tccaccgcga ccaatacgaa
     1321 ctccgccgcc gtaacccgga cccgctctcc ctgattgcgt ctaagaacgt aggattccac
     1381 gccgacggtg atcgacgtcc gtccggtcct ggtgatgtcg gtatagacac acacgacgtc
     1441 cccgaccttc accggctgca ggaagctcag gttggatacc gcggccgttg ccacacgccc
     1501 tttcgcccga gttcccgccg ccacgccggc ggccagatcc atcagcgaca tgatccagcc
     1561 gccgaagatg tcgcccgccg gattggtatc cgccggcatc gccacggtgc gcagcgacaa
     1621 ctctccgcgc ggtccgacgc tgctgttcgg catattggct tccttctgct atggtcccgt
     1681 catcatgacc gaaatcctgg ttcgccacga cagcgatggt atcgcgaccc ttacactgaa
     1741 ccgtccggcg gcgcgcaatg cgctgtcgat ggggctgatg gagtcactgg acggcgaatt
     1801 ggccggtatt gccgaggacc gttcggtcaa tgtcgtcatc atcgctgcca acggtcccgc
     1861 cttctgcgcc ggccacgacc tgcgcgaaat ccgcgccacc cccaatcggg cggcttatga
     1921 gcaggttttc gcactgtgct cccgcctgat gcagcgcatt gtccgtctgc cgaagccggt
     1981 cattgcgcaa gtccatggcg tcgccaccgc cgccgggtgc cagttggttg cctccgccga
     2041 tttggccgtg gccgccgaca ccgcgcgctt cgccacgcct ggggtggata tcggcctgtt
     2101 ctgctccacc cctatggttg ccttgtcgcg tgccgtgggc cgcaaggccg cgatggagat
     2161 gctgctgacg ggggaggcgg tttcggcatt acgagcgagg gaactcggct tggtcaaccg
     2221 cgttgtcccg gaggctgagt tgcacgacgc cactcgtgct ctagcggcgc agatcgccgc
     2281 gaaaagcccg ttgagcgtgg cgatcggcaa ggaagccttc tatcgccagg ccgaaatgga
     2341 cctgtcccgg gcgtacaatt acgcttcgga ggtgatgacc cggaacatgt tggcgcgcga
     2401 cgccgaggag ggcatcgacg ccttcctggc aaaacgccaa ccgcaatgga ctgggacttg
     2461 atcgggcacg ggctcgtcgc tacgtgattg ggaccgatga cagacccata cgaaattctt
     2521 ggcgtcgagc gtaccgccga tgaagcggcg attcgagcgg cttaccgcaa gctggcgaag
     2581 aagcaccacc ctgacgtcaa tccgaacaag ccggacgcgg cctcgcggtt tggcgagatc
     2641 agttctgcgt acgacctgct gtccgacaag gacaagcgcg cgcggtttga tcggggcgag
     2701 atcgatgccg agggccatga acgccagcag cagcggcaat actatcgtga tgcgccgggt
     2761 caggaacgct atgaccctgc cggcgggttc agccaggaag acctgga
//
LOCUS       DATAVD010000974         1960 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3442990, whole genome shotgun sequence.
ACCESSION   DATAVD010000974 DATAVD010000000
VERSION     DATAVD010000974.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3442990"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1007
                     /locus_tag="VHX39_18610"
     CDS             <1..1007
                     /locus_tag="VHX39_18610"
                     /inference="COORDINATES: protein motif:HMM:NF013259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sulfite reductase"
                     /protein_id="HEX3993190.1"
                     /translation="IEQRQKIVGYDIIVGGGMGMTHGEPETYPRAGNVIGFCKPEHAI
                     AVAEAVVTMQRDHGDRSNRKQARLKYTIDRMGLDTFVADLNQRLAVKLQKPRGFRFNS
                     TGDRLGWAEDETGQHHVTLFVENGRIAGRARDGLREIGALNVGRFIITPNQNLVIADI
                     PPTEQTKVAALLHEYGLDRQASGLRRNAIACVALPTCGLALAESERYLPSLITRLETE
                     LEALGLEGEEITIRMTGCPNGCARPYMSEIGLVGRSPELYNLYLGGAHDGSRLSKLHA
                     RDVDGDGIVAALRPVFAAYATDRQNNETFGDFVIRTGIVARTVAGLDFHENLAPALRN
                     "
     gene            1010..1324
                     /locus_tag="VHX39_18615"
     CDS             1010..1324
                     /locus_tag="VHX39_18615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993191.1"
                     /translation="MRTLFSQTVAVTRPTTDGAWFPGLPHVAAAACSWLVFGGAACAA
                     GLLMASFVSFVVWLPLVALALNNGEPLAPDAASPVLTPNAKRVLFVLWTATAWLAAAI
                     AR"
     gene            1824..>1960
                     /locus_tag="VHX39_18620"
     CDS             1824..>1960
                     /locus_tag="VHX39_18620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX3993192.1"
                     /translation="MSLSLTVDGVKRQLNVAPWTTLLDALRDHLGATGTKKGCDHGQC
                     GA"
BASE COUNT          374 a          563 c          645 g          378 t
ORIGIN      
        1 cgatcgaaca acgacagaaa attgttggtt acgacatcat cgttggcggt gggatgggaa
       61 tgacgcacgg tgagccggag acctatccgc gggccggcaa cgtcatcgga ttctgcaaac
      121 cggagcacgc gattgccgtc gccgaagcgg tggtgacgat gcagcgcgat cacggcgacc
      181 ggtcgaaccg caagcaggcg aggttgaaat acaccattga ccggatgggt ctcgatacgt
      241 tcgttgcgga cttgaatcag cgtctggcag tgaagttgca aaagcccagg ggatttaggt
      301 ttaattcgac gggggatcgg cttgggtggg cagaggatga aaccggccag caccacgtca
      361 ccttgttcgt cgaaaatggc cgcattgccg gccgggcgcg cgatgggctg cgggagatcg
      421 gcgcactgaa cgtcggccgt ttcatcatca caccaaatca gaaccttgtc attgcggaca
      481 ttccgccaac ggagcaaacc aaagttgccg cactgctgca tgaatacggg ctggaccgcc
      541 aggcgagtgg cctgcggcgt aatgccattg cctgtgtggc attgccgacc tgcggcctgg
      601 ctctggctga aagtgagcgc tacctcccgt cattgatcac gcgactggaa accgaactgg
      661 aggcgcttgg cctcgaaggg gaagaaatta ccattcgcat gaccggttgc ccgaatggtt
      721 gtgcccgtcc gtacatgtcg gagatcggtc tggttgggcg atcgccggaa ctttacaatc
      781 tgtatctggg tggtgcgcat gacggttcac gactgtccaa gctgcacgcc cgcgatgtcg
      841 acggcgatgg aatcgttgcg gcattgcgtc cggtgtttgc cgcttatgca acggaccggc
      901 agaacaacga aacctttggc gatttcgtga tccgcaccgg cattgtcgcg cgcaccgttg
      961 ccggcctcga cttccatgaa aacctcgcac ctgcactgag gaactgacca tgcgtacgtt
     1021 gttctcgcaa accgttgccg taacccgacc gacgaccgat ggcgcctggt ttccgggact
     1081 gccgcatgtt gcggcggctg cttgctcgtg gctggtgttc ggcggggcgg cctgcgcggc
     1141 gggactgttg atggccagct tcgtcagttt cgtggtctgg ctcccgctgg tggcgttggc
     1201 attgaataac ggggaaccac tggcgccgga cgcggcgtca cctgtgctga cgccgaatgc
     1261 gaaacgtgtg ctgttcgtgc tgtggacggc gacggcatgg ctcgcggcgg cgattgcgcg
     1321 gtaatctcgc gcgcgcgaca ctgggtattt gccggggaca aactggctgc cccggctcct
     1381 cagcctggct cccttaggct gttgttgggc gcattgttcc tgcccatcac ctgggctgcg
     1441 gcaacgggcc ttaaaagcgc agaagatggc tcgcgacgcc gccgggcgct gacgctttcg
     1501 cgcaatcaac gccgctgcga ggcgccccga tcctcttccg tgacggacgg cgggaacttc
     1561 cggcgcgatt gatcattggc cagccatgac cgcgggtccg agccagtgag gacgcgccag
     1621 gaagccggcg agggcgatgt ctgcgcaatg cgtcctgaaa aaacttcggt cgatttgaaa
     1681 agaccgcgca tgcggcgatc cacgaggatt tgctggccgc cagcgcattg caatgtgacc
     1741 cggcggcctg gacgtatagg gcaagggacg tcgcaaaccg caacatgaac aggagcgagc
     1801 gtatggtctc ggtaccggac aagatgtcgc tgtcgttaac tgtggatggc gtgaaacgcc
     1861 agctcaacgt cgcgccatgg accacgctgc tggacgcact gcgtgaccat ctcggcgcaa
     1921 ccggcaccaa gaagggttgc gatcacggcc agtgtggcgc
//
LOCUS       DATAVD010000975         1791 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3443075, whole genome shotgun sequence.
ACCESSION   DATAVD010000975 DATAVD010000000
VERSION     DATAVD010000975.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3443075"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..768
                     /locus_tag="VHX39_18625"
     CDS             <1..768
                     /locus_tag="VHX39_18625"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX3993193.1"
                     /translation="FTVSTQGSLGLARFRPVRWKTVMFRSGLSAFSTTTWYLAWQHMQ
                     LAETYALGFTAPLIMTLLAVPLLGERIRWRRMLSTLLGFSGVLVMVRPSGGIPFTPAV
                     AWLMAGIVSMAMTRILARHLSRTETPECQAFWLMVSFAVAGIGMVLVVPPPFFGDAAV
                     WGALLFLGVSSGLAHCVFTRAYGLAPVSALAPYEYTMLLWGGALGFVVFGEVPSGTTL
                     GGAAIVALAGLYNLHRERVRRAQDRAIGAAVAVNVPG"
     gene            821..1132
                     /locus_tag="VHX39_18630"
     CDS             821..1132
                     /locus_tag="VHX39_18630"
                     /inference="COORDINATES: protein motif:HMM:NF015513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX3993194.1"
                     /translation="MPRKPNNSRQARILFATLLNGARTWWHGYDLSKATGLRSGTLYP
                     LLMRLSEQGLLESQWQDSERPGLPPRHIYRLTTSGQAHAQDFARAEAAAAIGDESKAS
                     A"
     gene            1129..>1791
                     /locus_tag="VHX39_18635"
     CDS             1129..>1791
                     /locus_tag="VHX39_18635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993195.1"
                     /translation="MTSEPAGMRRLALRAAQHAARVLPGTPSYWAQAMLQELHYIGND
                     REALRWAIGCVLASYAAKLSAIAQFRSRLLLNGLAAGALFAVFITMALQGHASVPPGI
                     KSPNFDETLCDLPNISPEILPRLQCGTVSVPRDHDNPAAGSFRLAIVVIRTLATERKP
                     DPVVFLQGGPGTPLTSRASQVARNEAAVLAPDRDLILIDQRGSGRSEPALCPDLPAVQ
                     LRL"
BASE COUNT          281 a          546 c          584 g          380 t
ORIGIN      
        1 tttaccgttt cgactcaagg aagcctggga ctggcacggt tcaggccggt gcgctggaag
       61 acggtgatgt ttcgttccgg cctgtcggcg ttctcgacga ccacctggta tctcgcctgg
      121 cagcacatgc agcttgccga gacttacgct ttgggtttca cggcaccctt gatcatgacc
      181 ttgttggcag tgccgcttct gggcgagcgc attcgctggc gccgcatgct gtcgacgctg
      241 ctgggttttt cgggtgtgct ggtgatggtg cgtccaagcg gcggcattcc gttcacgcca
      301 gcagtggcct ggctgatggc cgggatcgtt tcgatggcga tgacccggat cctggcacgc
      361 catttgtcgc ggaccgagac tcccgagtgc caggcattct ggctcatggt ctcctttgcc
      421 gtggcgggca tcggtatggt gctggttgtg ccgccgccgt tctttggcga tgccgcggtc
      481 tggggcgccc tgctgtttct gggcgtgtcg agcgggctgg cgcattgcgt gttcacccgc
      541 gcttacggcc tggcgccggt gtccgcgctg gcgccatacg aatacacgat gctgctgtgg
      601 ggcggcgcgc ttggcttcgt ggtgttcggg gaagtgccct cgggaaccac gctcggaggc
      661 gcggcgatcg tggcgcttgc gggattatac aacctgcacc gggaacgcgt gcggagagcg
      721 caggatcggg cgatcggcgc cgcggtggcg gtgaacgtcc cgggctgacg tgccgtagac
      781 ccgtggttga cataaactcg atatatgtcg agaatacggt atgccgcgga aaccgaacaa
      841 ttcccgccag gcccgcatcc tgtttgccac cctgctcaat ggcgcccgga cgtggtggca
      901 cggttacgat ctctcgaaag cgaccggtct gcgatcgggc acgctgtatc ccttgctcat
      961 gcgcctgagc gagcaggggc ttttggaatc ccaatggcag gattcggaac gacctggtct
     1021 gccaccgcgc catatttatc ggctgaccac ctcgggccag gcacacgcgc aagattttgc
     1081 ccgagccgaa gcggcggccg caattggtga cgagtccaag gcttcggcat gacctccgag
     1141 ccagccggaa tgcggcggct ggctttgcga gcggcgcaac acgccgccag ggttttgcct
     1201 ggaacgccct cgtactgggc tcaggcaatg ctgcaggagc tgcattacat cgggaacgat
     1261 cgagaggcct tgcgttgggc catcggctgt gtacttgcaa gctatgccgc aaaactctcc
     1321 gcaattgccc agtttcgctc gcggcttctg ctgaacgggc tcgcggcggg tgctctgttc
     1381 gcggtgttca taacaatggc gttgcaagga cacgccagcg tgcctccggg cataaaatct
     1441 cctaatttcg atgaaacgct gtgcgatttg ccgaacatat cgccggaaat tctgccgcga
     1501 ttgcaatgcg gcaccgtcag cgttccccgt gaccacgaca acccggccgc cggttcgttc
     1561 aggttggcga tcgttgtcat ccgaacgctc gccaccgagc gaaagcccga cccggtcgtc
     1621 tttctccagg gcgggccggg aacgccgctt accagccgcg cctcgcaggt tgcccgcaac
     1681 gaggccgcag tcctggcacc cgatcgtgat ttgatcctga tcgatcagcg tggttccggg
     1741 cgatcggaac cggcactttg tcctgatctg ccggctgtac aactgcggct g
//
LOCUS       DATAVD010000976         5205 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2885441, whole genome shotgun sequence.
ACCESSION   DATAVD010000976 DATAVD010000000
VERSION     DATAVD010000976.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5205
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2885441"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            117..557
                     /locus_tag="VHX39_18640"
     CDS             117..557
                     /locus_tag="VHX39_18640"
                     /inference="COORDINATES: protein motif:HMM:NF017262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HEX3993196.1"
                     /translation="MTIYAGIKALHLLCAVIWVGGMFFAYVVLRPSMVAIEAPQRMLL
                     HTRVFKKFFLVIWHAMPIILITGFAMIALQWNMATAPWQIQAMMGLGLLMAAVFLAIV
                     FGPYRQFRRTTDRNRMASSLNSIRKLIGINLFFGLITVIIAGLL"
     gene            723..1505
                     /locus_tag="VHX39_18645"
     CDS             723..1505
                     /locus_tag="VHX39_18645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3993197.1"
                     /translation="MEVRLDGRTAIITGSSKGLGLAMAKEFAASGANVAILARSPDAL
                     AEAQATASAGASGKVATFQCDVSKAEDINKTFAAVIKAFGQVDILINNAGMSRAMPSD
                     QITDDIWQEDLDLKLFAAIRLARLCWPGMKDRKWGRIINVLNTGAKAPRANGAPTAVS
                     RAAGMALMKVMSAEGAPHGILVNGMLVGQIISDQIARRYKTAGSNEPFETFVAKAGVG
                     IPVGRMGKAEEFAAMACFLCSDHAGFTTGTAINMDGGASPVV"
     gene            complement(1662..1985)
                     /locus_tag="VHX39_18650"
     CDS             complement(1662..1985)
                     /locus_tag="VHX39_18650"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF037100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEX3993198.1"
                     /translation="MTAPPIEVAPEAWRSIQDILRKHVPDREVWAFGSRAKRTARTYS
                     DLDLAVITETPLPFAVSGGMKEDFSESDLPFRVDVLDWAVTRDSFRRIVEKDKVVVQS
                     ARSVS"
     gene            complement(1982..2389)
                     /locus_tag="VHX39_18655"
     CDS             complement(1982..2389)
                     /locus_tag="VHX39_18655"
                     /inference="COORDINATES: protein motif:HMM:NF020360.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HI0074 family nucleotidyltransferase
                     substrate-binding subunit"
                     /protein_id="HEX3993199.1"
                     /translation="MDLNISALERVIVRLEEAVDAYRRDTSQSLIRDGLVQRFEFTYE
                     IGHKLLRRYLAANAIPADLINSMNFADIIRVGNENGLLLGNWPRWKTFRDMRARTSHS
                     YDEAVALEVVAGIPGFLEEARYLRDRLKERSTE"
     gene            complement(2520..3602)
                     /locus_tag="VHX39_18660"
     CDS             complement(2520..3602)
                     /locus_tag="VHX39_18660"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004143313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3993200.1"
                     /translation="MTVEFIGMIHHREASEIMAPPPVIMDRGYIRDFAQAAEHGGFDK
                     VLVGYYSDGPDGFLLAAAAAAHTDKLGFLVAHRPGFVAPTLAARKFATLDQITGGRAA
                     IHVISGGDDVDQFRDGDTLAKEDRYARTDEYVSILKRIWTEPGPTVDHEGRFYRFAGA
                     STAQRCVQQPRIPIYFGGASDAAIAVSAKHADVYALWGETQDQVREITGRLRVEAAKH
                     DRSVRVSLSLRPILAPTEDEAWARAETIKQRIIERRAAMGLGPRNPVNEGSKRLLAAA
                     AKGERLDKRLWTGAAMLTGASGNSTSLVGTPRQVAESLCDYYDLGVTTFLIRGFNPLV
                     DNIEYGRDLLPLTRQLIAERLAARAA"
     gene            complement(3660..4802)
                     /locus_tag="VHX39_18665"
     CDS             complement(3660..4802)
                     /locus_tag="VHX39_18665"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX3993201.1"
                     /translation="MPPSIRTEWDLDPDFLTVNHGSFGATPKSVIAAQRVWQDRMERQ
                     PSRFMNTVYAGAIRDAAEALGSFVNANGRDIVFVGNATTGCNAVLRSLTKLDSGDTVT
                     LLSHVYGAVHNTVRFVAEQTGARIVRAAVPYPDPTEDALVAAVAATLTPRTRLAVIDH
                     ITSGSAIVVPVQRIVALCHAAGVKVLIDGAHAPGQVDLDLTAIGADWYVGNCHKWLCA
                     PKGCAFLHAAPAAQAGLHPGTISHGYGQGFLAEFDWTGTADPSAFLAVTEAIAFHERL
                     GGAAFRARNRDLAAQGAERIARRLNTQVGTHGAVAGAMATIRLPVDDPNPAHALAIRQ
                     RLMAAGTDAPVHALDGALWLRVSAFAYNELGDYDRLAALVASVLRD"
     gene            complement(4840..>5205)
                     /locus_tag="VHX39_18670"
     CDS             complement(4840..>5205)
                     /locus_tag="VHX39_18670"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3993202.1"
                     /translation="VKESLLRMQFRSQTMTYRAQYADARFDIMERDGVPFGQLVLHEA
                     EGIATFVDFALLPGERGGGLGTAVMVRLLDWVGERCAVARLSILYNNEASLHMTRRIG
                     FVQMGEAPPYVEMEWRRPV"
BASE COUNT          993 a         1789 c         1527 g          896 t
ORIGIN      
        1 cgcaccggct tcgccaccgc cttcgccgag ggcctcgcgg tgaccgagac cgcccctcgc
       61 tcaatcgccg cgaatgagct acgtgccttg ctgaccgagt tgctggagct gactggatga
      121 cgatctacgc gggaatcaag gccctgcacc tgctgtgcgc ggtgatctgg gtgggcggca
      181 tgttcttcgc ctatgtggtg ctgcgcccga gcatggtcgc gatcgaagcc ccgcagcgga
      241 tgttgttgca cacacgggta ttcaagaagt tcttcctggt gatctggcac gccatgccca
      301 tcatcctcat caccggcttc gcgatgatcg cgttgcagtg gaacatggcg acggcacctt
      361 ggcagattca ggcgatgatg ggcctgggat tgctgatggc agcggtcttc ctggcaatcg
      421 tcttcggccc ctaccggcag tttcgccgca ccaccgaccg caaccggatg gcatccagcc
      481 tgaacagcat ccgcaagctg atcggcatca atctgttttt cgggctgatc accgtcatta
      541 ttgccggcct gctgtaacgc ccgatcatgc cgcgtacctc tcgataccga cgcccgcccg
      601 gcagcagcgc gaaacccatc gacaggaaaa gtccgtccac cgggtcagcg cgccgttcgc
      661 cactcgtttg cacggaaccg gcatgtcccc cacagtgcga ctttcgatag gggagtaaac
      721 cgatggaagt ccgtctcgac ggtcgcaccg cgatcataac cgggtccagc aagggcctgg
      781 gcctggccat ggcgaaggaa ttcgccgcct ccggcgccaa cgtggcaata ctggcgcgca
      841 gcccggacgc cctggcggaa gcccaggcca ccgcatcggc cggcgcatcc ggcaaagtgg
      901 cgacgttcca gtgcgacgtc tccaaggccg aggacatcaa caagacgttt gccgccgtga
      961 tcaaggcatt cggccaggtg gatatcctga tcaacaacgc cggcatgtcg cgggcgatgc
     1021 catccgacca gatcaccgac gacatctggc aggaagacct tgatctcaag ctgttcgccg
     1081 cgatccgcct ggcgcgtctc tgctggccgg ggatgaagga ccggaaatgg ggccggatca
     1141 tcaacgtgct gaacaccggc gccaaggcac cgcgggccaa cggagcgccc accgcggtct
     1201 cgcgcgccgc cggcatggcg ttgatgaagg taatgtcggc cgagggcgcg ccccacggca
     1261 tcctggtcaa cggcatgctg gtcgggcaga tcatctccga ccagatcgcc cgccgttaca
     1321 agaccgccgg cagcaatgag ccgttcgaga ccttcgtggc gaaggccggc gtcggcatac
     1381 cggtcggccg catgggcaag gcagaggaat tcgccgcgat ggcctgcttc ctgtgcagcg
     1441 accatgccgg atttaccacc ggcacggcga tcaacatgga cggcggcgcc agcccggtcg
     1501 tctaggggcg gcgggggttc ggtgtcaggc cgagcccccc ggtccagtat aaggccgtgg
     1561 cttgaccatg gatcggcgac aaatcgccca aattcgcgat tttgccgtgc cgtcgccact
     1621 gggaccgacc gccgacgcgc acatcgtcat acctggtcca gctatgacac ggaccgagcc
     1681 gattgcacga caaccttgtc tttctcgacg atacggcgaa aagagtctcg cgtcacagcc
     1741 cagtcgagca catcgacccg gaacggcaga tcggactcgg aaaaatcctc cttcattcca
     1801 ccgctgacgg cgaacggcaa aggggtctcg gttatgacag caagatcgag atcggaatag
     1861 gtccgcgcgg ttcgcttcgc gcgggagccg aatgcccaaa cctcccgatc aggcacatgc
     1921 ttgcgcagaa tgtcctggat gctccgccac gcctccggag caacttcgat cggtggggcc
     1981 gtcattccgt cgaccgctct ttgagccgat ctcgcagata ccgggcctct tccaagaaac
     2041 cgggaatgcc cgcgacgacc tccagggcga ccgcctcgtc gtagctatgg ctggttctcg
     2101 cccgcatgtc gcgaaatgtc ttccaccgcg gccagtttcc cagcaaaagc ccattttcgt
     2161 tgccgacccg gatgatgtcg gcgaagttca tgctgttgat caggtccgcc ggtatggcgt
     2221 tcgccgccag atagcgtcgc aacagtttgt ggccgatctc gtaggtaaat tcgaaccgct
     2281 ggaccagacc gtcgcgaatg agcgattggg acgtgtcccg ccggtaggcg tccacggctt
     2341 cctcaaggcg cacgatgact cgttccaagg cggagatatt gaggtccatg gcttgatcgt
     2401 cacgcggttg ctggtcggcc aacagccctt gtcgggttgc gacgacatct gtagcgatct
     2461 gattctattc gcgcgacctt cgctatttcg aggccaggac gctcggcgcg ccccaaccct
     2521 cacgccgccc gagcggccag ccgttcggcg atcagttgcc gtgtcagcgg cagcaggtcc
     2581 cggccgtact cgatgttgtc caccaacgga ttgaagccgc ggatcaggaa tgtcgtcacc
     2641 cccagatcat aatagtcgca caacgactcc gccacctgcc gaggcgtgcc caccaggctg
     2701 gtggaattgc cgcttgcccc cgtcagcatc gcggcacctg tccatagacg cttgtccaga
     2761 cgttcgccct tcgccgcggc cgccagcaac cgcttcgacc cttcattcac cgggttccgc
     2821 ggccccagcc ccatcgccgc ccgccgctcg ataatccgtt gcttgatcgt ttccgcacgc
     2881 gcccatgcct cgtcctcggt cggtgccaaa atcgggcgca gcgacagact gacgcgcacc
     2941 gaacggtcat gcttcgccgc ctcgacgcgc agccggccgg tgatttccct gacctggtcc
     3001 tgggtttcgc cccacaacgc atagacgtct gcatgcttcg cactgaccgc aattgccgcg
     3061 tccgaggcac caccaaaata gatcggaatc cgcggctgct gcacgcagcg ttgcgcggtg
     3121 gaagcaccag cgaaacgata gaaccgcccc tcatgatcga cggtcggtcc cggttcggtc
     3181 catatccgct tcaggatcga tacgtattcg tcggtgcggg cgtaacggtc ctccttcgcc
     3241 aaggtatccc catcgcggaa ctgatcaacg tcgtcgccgc cgctgatcac atggatcgcc
     3301 gcccgcccgc cggtgatctg atccagcgtg gcgaacttcc gagccgccag agtcggcgcg
     3361 acgaagcccg gacgatgcgc aaccaggaac cccagcttgt cagtatgcgc cgccgccgcc
     3421 gccgccagca ggaacccatc cggcccgtcg gagtaatacc cgaccaacac cttgtcgaag
     3481 ccgccatgct ccgccgcctg ggcaaaatca cggatataac cgcgatccat gatcaccgga
     3541 ggcggcgcca tgatctccga cgcctcccga tgatggatca tgccgatgaa ttcgacggtc
     3601 atgtgatgct ttccttccga acggcccgac tatagccgcg agcggtcgaa ccgatccagt
     3661 cagtcccgca acacggacgc caccagcgcg gccagccggt cataatcacc cagttcgtta
     3721 taggcgaagg ccgacacacg cagccataac gcgccatcca acgcatgcac cggggcgtcg
     3781 gtgcccgcag ccatcagacg ctgccggatc gccagcgcat gcgccgggtt cgggtcatcg
     3841 accggcaggc ggatcgtcgc catcgccccc gcgaccgccc catgcgtacc cacctgagta
     3901 ttcaggcgcc gcgcgatccg ttccgcacct tgcgcggcaa ggtcccgatt gcgcgcgcga
     3961 aacgccgcac cgcccaggcg ctcatggaat gcgatcgcct ccgtcaccgc caggaacgcg
     4021 ctcgggtccg ccgtccccgt ccagtcgaac tccgccaaaa acccctgtcc atagccatgg
     4081 gagatcgtgc cggggtgcag ccccgcctgc gctgccgggg cggcatgcag gaacgcgcag
     4141 cccttcgggg cgcacagcca tttatggcaa ttgccgacat accagtccgc gccgatggcg
     4201 gtcaggtcca gatcaacctg gcccggtgcg tgcgcgccgt cgatcagcac cttcacaccg
     4261 gccgcgtgac atagcgcgac gatccgctgc accggcacga cgatcgcgct gccggacgtg
     4321 atgtgatcga tcaccgccaa ccgggtgcgc ggcgtcaaag tcgcggcgac cgcggcgacc
     4381 agcgcgtcct cggtcggatc aggatatggg accgccgctc gcacaattcg cgctcctgtc
     4441 tgttcagcaa cgaacctgac cgtgttgtga accgcgccat aaacgtgtga cagtaacgtt
     4501 acggtgtcgc cggaatccaa cttggtcaag ctgcgaagaa cagcgttgca accagtagtt
     4561 gcgtttccaa cgaatacaat gtcgcgcccg ttcgcgttca caaacgaacc caaagcctcc
     4621 gccgcatcgc ggatcgcccc cgcatacacc gtgttcatga accggctcgg ttgccgctcc
     4681 atccggtcct gccagacacg ctgagcggcg atgacggatt tcggcgtcgc cccgaaagat
     4741 ccatggttga cggtcaggaa atcgggatcg agatcccact cggtgcggat agaaggcggc
     4801 atgggcaaac agctttcaaa cgacggcagg atgaaacgtc taaaccggcc gacgccattc
     4861 catctccaca tacggcggcg cctcccccat ctggacgaag ccgatgcggc gggtcatgtg
     4921 cagcgatgcc tcattgttat acagaatgct cagccgcgcg acggcacaac gttcgcccac
     4981 ccaatccagc agacgcacca tcacggcggt acccaggccg cccccccgtt cgccgggcag
     5041 cagggcaaaa tcgacaaacg tcgcaattcc ctcggcttca tgcaggacca actggccgaa
     5101 cgggacgccg tcgcgctcca tgatatcgaa ccgggcatcg gcatactggg cgcgatacgt
     5161 catggtctgc gacctgaact gcatccgcag cagcgactcc ttcac
//
LOCUS       DATAVD010000977         3145 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_841028, whole genome shotgun sequence.
ACCESSION   DATAVD010000977 DATAVD010000000
VERSION     DATAVD010000977.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3145
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_841028"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            378..818
                     /locus_tag="VHX39_18675"
     CDS             378..818
                     /locus_tag="VHX39_18675"
                     /inference="COORDINATES: protein motif:HMM:NF022082.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli assembly protein CsgF"
                     /protein_id="HEX3993203.1"
                     /translation="MLASAVLAVGVIAVGQAYGGDLIYTPINPSFGGNPNNESALMDA
                     ANAQKTATAPVAPSTTTGPGTTQSQSNAQLFVSELEGQLFSELANQVTQAIFGTNPQN
                     NGTITFGDTTVVFDRTATAINLTITDFTTGQVTQISVPQLVTSN"
     gene            830..1963
                     /locus_tag="VHX39_18680"
     CDS             830..1963
                     /locus_tag="VHX39_18680"
                     /inference="COORDINATES: protein motif:HMM:NF015724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HEX3993204.1"
                     /translation="MAALLNWTDLVSSRLLLPLKLAIVAVPLTLAACTTMPLGEKASL
                     SQGLYTPVLDPQTKISASLTSLPPPARRVKVAVYDFPDLTGQFKDSQTVQTLSKAVTQ
                     GGGSMLIKSLQDAGDGSWFSVLDRQALNDVLKERQIVTEMRKEYRDETQINASVLPPL
                     ADAGIILEGGIIGYDSNTMTGGAGASFLGIGGDTQWTQDTVTVTLRAVSTKTSEVLAS
                     VTVDKVLASVALDGNVYRYVATDQLLQAESGFTQNEPKQIAVQEAIDKAVMSLILEGA
                     QLRIWSFADKAAGNGLIQQYMKEKYDGASAVVATGPALPETKDPATLAQTVPLTPVAI
                     GRPVVRTYSVPMGGQTPPGPQSSIPLPTGALPPPEERGGEPVD"
     gene            2126..2620
                     /locus_tag="VHX39_18685"
     CDS             2126..2620
                     /locus_tag="VHX39_18685"
                     /inference="COORDINATES: protein motif:HMM:NF018688.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993205.1"
                     /translation="MISRLSIAVGLAWLTYSSMMPARAANELVLLPDAGGVNRTTLIT
                     SGSGNLVLASQEDTMGADTLAVVIAGNRNGGGSGLIFTGPLAAAGLVGGAAIQGGSNN
                     SLLVEINGDANLFSFQQAGLANRLTASIAGNNNQVAVTQTGVGNSVTLSQTGANNVVD
                     IEQR"
     gene            2657..>3145
                     /locus_tag="VHX39_18690"
     CDS             2657..>3145
                     /locus_tag="VHX39_18690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993206.1"
                     /translation="MRYRLRLCAVAGAYLLTATISYAGSGNSLYLVQDGGAAGVNNFV
                     SDQSQVDGSSIDGGSPLVPATQTGASNTAHLSFSCSMDLPCIGGTIALTQTSKASTAA
                     TNGNNASIAVRGGGNASVIQNGEGNSADMLLTGGDGNIDQQGSGNNAKLQVGAGVTGT
                     ILQ"
BASE COUNT          648 a          949 c          981 g          567 t
ORIGIN      
        1 cgcccaggcg gccatgctca aggcttgtag gcccgcccaa atgccatatt atcaacaaag
       61 tcttaacaag caagctttcc gcgaagttaa tggtaaatca gcaacagtgc tcggcgcgac
      121 aggtcagctg ggctgaaacc ggcggacaac aagcgttttc tgccactgag gggctgaggc
      181 gcaatgccgc aggcaggccc gaccgtaccc ttttatgccg ggcctgctgc gtcaagccgc
      241 tccgagcgcg cgactgtggc gaatcaacta catgcgctgc gacgaacaaa tgtgatagga
      301 attgggcagc gccggggctc gatcatggcc ggagcctcgg tgcagccgag gaggggagag
      361 acttcatgag gtatcgcttg ctggcgtccg cggtgttggc ggtcggcgtt atcgcggtcg
      421 gccaggctta cggcggcgac ctgatttaca ctccaatcaa cccgagcttc ggtggcaacc
      481 caaataacga gtccgcgctg atggacgcgg ccaacgccca gaagacggcg acggcgccag
      541 ttgcgccttc gaccaccact ggcccgggga cgacgcaaag ccagagcaac gcccagctct
      601 tcgtctccga gctcgaggga cagcttttct ctgagttggc gaaccaggtg acgcaggcga
      661 ttttcggcac caatccgcag aacaacggca ccatcacatt cggcgacacg acggtcgtat
      721 tcgaccgcac cgcgacggcc atcaatctca ccatcaccga tttcaccacc ggccaggtca
      781 cgcagatctc cgtgccccaa ctggttacca gcaattgatc cgtttccggg tggccgcttt
      841 gctcaactgg actgacctgg tttcgtcgcg tctcctgctg ccgctcaagc tggcgatcgt
      901 tgcggtgccg ttgacgctcg ctgcctgcac gacgatgcct ctcggcgaga aggcctcgct
      961 gagccagggc ctctacacgc cggtgctcga tccgcagacg aagatcagcg cctcgctgac
     1021 gagcctgcca ccgccggctc gccgggtgaa agtggcggtc tatgatttcc cggatctcac
     1081 cggccagttc aaggactcgc aaacggtcca gaccctctcc aaggcggtca ctcagggtgg
     1141 cggttcgatg ctgatcaaat cgctgcagga tgccggcgac ggcagctggt tcagcgtgct
     1201 cgaccggcag gcccttaacg atgtgctgaa ggagcggcag atcgttaccg agatgcgcaa
     1261 ggagtaccgg gacgagacgc agatcaacgc gtcggtgctg ccgccgcttg ccgatgccgg
     1321 gatcatcctg gagggcggga ttatcggcta tgacagcaac accatgaccg gcggcgctgg
     1381 cgccagcttc ctcggcatcg gtggcgatac gcaatggacg caggacaccg tcacggtgac
     1441 gctgcgcgcc gtttcaacca agaccagcga ggtgctggcg agcgtgacgg tcgacaaggt
     1501 cctggcgtcc gtggctctcg acggaaatgt ctatcgctac gttgcgactg accaactcct
     1561 gcaggccgag tccggcttta cccaaaacga gcccaagcag atcgcggtgc aggaggcgat
     1621 cgacaaagcc gtcatgtcgc tcattctgga aggggcgcag ctcaggatct ggtccttcgc
     1681 cgacaaggcg gcaggtaatg gcctgatcca gcaatatatg aaggaaaagt acgacggtgc
     1741 atcagccgta gtggcgaccg gtccggcact tccggaaacg aaagaccccg caaccttagc
     1801 tcagacggtg ccgctgacac ccgttgcaat tggcaggccg gtcgtgagga cctattccgt
     1861 gccgatgggc ggccaaacgc cgccagggcc gcagtcgtcc atcccgttgc cgaccggagc
     1921 cttaccgccg ccagaggaga gggggggaga acccgtcgac tgaggcagtt gcagtcccgg
     1981 tccggtcagg gcagaccaca ggtcggtaat ggcttctgcc cggcccaggc gggatccaaa
     2041 agggagcaag ggcgaggact ggccgcccgc attaggagtc tcttgacgcc tagcaagcca
     2101 tcatccaacc cgcatggagg ttgcgatgat atcccgcctt tcaatcgcgg tgggcctggc
     2161 ttggcttacg tactcgtcaa tgatgccagc ccgtgcggcc aacgaacttg ttcttttgcc
     2221 agacgccggc ggcgtgaacc gaacaacgct gataacttcg ggaagcggca atttggttct
     2281 ggcctcgcag gaagatacga tgggagcaga tacacttgcc gttgtcatag cgggtaacag
     2341 aaacgggggc ggctccgggc tgattttcac aggccccctc gcagccgcgg gactggtcgg
     2401 cggcgcggca atccaggggg gatcgaacaa cagcttgctg gtcgagataa atggcgacgc
     2461 caacctcttt tcttttcagc aggccggcct cgccaaccga ttgaccgctt cgatcgcggg
     2521 taataacaat caggttgcgg tgacccagac cggcgtcggc aattcggtca ctctgtcgca
     2581 gacgggcgcc aacaatgtcg tggacatcga gcagcgctaa atcatggcgg tggctcatgc
     2641 ggggaggggc ttccggatgc gctatcgatt gagattatgt gctgttgctg gtgcgtatct
     2701 gctgaccgcg acgatttcgt acgccggtag cggaaattcc ctctatttgg ttcaggacgg
     2761 cggcgcggcc ggagtaaaca actttgtatc cgaccaaagc caggttgatg gttcatcgat
     2821 cgatgggggc agtccgctcg tgccggcgac gcaaactggc gcatcgaaca cagctcattt
     2881 gagcttttcc tgcagtatgg atttgccctg cattggcggc acaattgcgc tgacgcagac
     2941 cagcaaggcc agcaccgccg caactaacgg caacaacgcc agcatcgcgg tgcgaggcgg
     3001 cggcaatgcc agcgtcatcc aaaacggtga aggcaattct gcggacatgc tgcttaccgg
     3061 tggcgacggc aacatcgatc agcagggctc cggtaataac gcgaaacttc aggttggagc
     3121 aggggtcacc ggcacgatcc tgcag
//
LOCUS       DATAVD010000978        10982 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3255378, whole genome shotgun sequence.
ACCESSION   DATAVD010000978 DATAVD010000000
VERSION     DATAVD010000978.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10982)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10982)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10982
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3255378"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1004)
                     /locus_tag="VHX39_18695"
     CDS             complement(<1..1004)
                     /locus_tag="VHX39_18695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX3993207.1"
                     /translation="MPAPSQSTLNAVLDHADANLVASRANLFDLLRIKSISAQPAHAA
                     DCVKAAEWWCEQLAGLGFEAAVRPTAGHPVVVGHLAGPADYAGPHVLFYGHYDVQPVD
                     PLSLWHSDPFDPQLVDGPRGKRYVARGAVDDKGQTLMFLEALRAWHSAGGGIPARITV
                     LIEGEEEVGSVSLDPFLRENKAELAADIALISDTGMWDAETPAITTRLRGMTYAEVTL
                     KAANRDLHSGLYGGSALNPINALTKILGELQDENGRIQLPGFYDKVAPISNSQRAQWD
                     ALGFDEAAFLGGIGLTSPVGERGYSALERLWARPTADINGIWGGYTDAGSKTVIASEA
                     S"
     gene            1234..2193
                     /locus_tag="VHX39_18700"
     CDS             1234..2193
                     /locus_tag="VHX39_18700"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX3993208.1"
                     /translation="MADGLRTLGHTVHVVELDGRLPDPDQAAIYAARTAWAALPADSV
                     KLIDGLALPAFDGLPLHQVTALIHHPASFETGLPEETAHRLHITEAAMFRDLPRLVVT
                     SQHTAERIVKEFATPSEHISVVVPGIDDLPRCNGSAGSPCQILSVGALIPRKGHDVLL
                     RALARLFDLDWELTLAGSADRDPVHANGLHALADELAITRRIHFANEATETLWAGTDL
                     FALTSYFEGYGVAIAEALRRGLPVAVTNVGAVPTLVGPEAGIVCAPGDVEQLSKALRR
                     LIFDRPMLHDLAEIAWQSGQSLPSWNEQAGHLAAVLAGQDLAD"
     gene            2689..3957
                     /gene="otnK"
                     /locus_tag="VHX39_18705"
     CDS             2689..3957
                     /gene="otnK"
                     /locus_tag="VHX39_18705"
                     /EC_number="2.7.1.217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxo-tetronate kinase"
                     /protein_id="HEX3993209.1"
                     /translation="MLLGVIADDFTGATDLCSMLVRGGMRTVQLIGVPSPDLPVPDAD
                     AVVVALKSRTAPVRQAIDESLAALKWLQAAGARQYFFKYCSTFDSTDQGNIGPVADAL
                     VAALDCGFALACPAFPTNARTVYQGYLFAGGVPLNESGMENHPLTPMTDANLVRVLSR
                     QTEGTVGLVPFVTVDQGAHAIRDAMTQLKERGRRYAIVDAITDAHLVSIGEAAASHAL
                     ITGGSGVAMGLPANFRRSGLLPDAIDPGALPRIEGAGAVIAGSCSRATLAQLGYARAH
                     LPMFELDAMATPDAAALAEAALTWASDKIGDKPLVIAASAPPDKVAALQARLGRDAAG
                     ALIEDAAARIAEGLVARGVRKLVVAGGETSGSVAGRLGVRSLRIGVEIDPGVPWTFAE
                     GRGPGLMMALKSGNFGATDFFLKAFRVLEG"
     gene            3963..4601
                     /locus_tag="VHX39_18710"
     CDS             3963..4601
                     /locus_tag="VHX39_18710"
                     /EC_number="4.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HEX3993210.1"
                     /translation="MTEHDTRILLSELGASLFTRGFSVGSAGNISVRLPDGYLMTPTN
                     SSLGRLDPDRLSKLDPAFQHIGGDKPSKEVFMHRAFYQARPEAGAVVHLHSTHATAVS
                     CLPDVEASNPIPPLTPYFVMRVGRHMPIVPYYRPGDPAMELAINTAAQDARAVLLANH
                     GPVISGKTLTDAVYAAEELEEAAKLFLMLHSQGRPPRLLTDPQVDDLLATFQ"
     gene            complement(4675..5244)
                     /locus_tag="VHX39_18715"
     CDS             complement(4675..5244)
                     /locus_tag="VHX39_18715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993211.1"
                     /translation="MSNDDTMNDVPAGKAVGAQAMAMRAATKKAAVKKPAVKKAAAKK
                     AVVKAAPKKAAAKKAAPKKAAAKAAPKKAAVKKAAPKKAVAKAAPKKAASKAAPKKAA
                     VKKVAPKKAVAKAAPKKAAGKAAPKKVAAKGAAKKAAPKKAAVKKAAMKVAVTKKAVA
                     KKGVRKAKAMTTSAPAPEAAPIAASESNE"
     gene            complement(5687..6841)
                     /gene="prpC"
                     /locus_tag="VHX39_18720"
     CDS             complement(5687..6841)
                     /gene="prpC"
                     /locus_tag="VHX39_18720"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050440 - 2-methylcitrate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HEX3993212.1"
                     /translation="MSETTSLPNRAKKGVGLSGVTAGNTALCTVGRSGNDLHYRGYDI
                     LDVADTCEFEEIAFLLVHGALPTRAELAGYKAKLKALRGLPNAVKLALEALPAASHPM
                     DVMRTGVSALGCVLPEKEDQNPPGARDIADRLMACLGSMLLYWFHYAHNGKRIDVETD
                     DDSIGGHFLHLLHGKAPSEMFVRAMHTSLILYAEHEFNASTFTCRVVAGTGADMYSAL
                     TAGIGALRGPKHGGANEVSFEIQNRYASPDEAEADIRKRIEAKQVVIGFGHAVYTIAD
                     PRNKVIKEVARRLSQHAGSMKMFDIADRIESTMWDAKKMFANLDWFSAISYHMLGVPM
                     AMFTPLFVIARTSGWAAHVMEQRVDNKLIRPTANYTGPENLTFVPIDQRG"
     gene            complement(6864..8363)
                     /locus_tag="VHX39_18725"
     CDS             complement(6864..8363)
                     /locus_tag="VHX39_18725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX3993213.1"
                     /translation="MIDHDVRVSPSKAGLKREDQLAWKFAGVAADKVAVTKDVAAMIV
                     NRVIDNASVAIASANRHAIVSARDMALARPNKNGASVFGVPSSKRVSPEWAAWANGVA
                     VRELDMHDTFLAADYSHPGDNIPPILAVAQTMEKSGRDLIRGIATGYEIMINLVRAIC
                     LHEHKIDHIAHLCPAQAGGIGTLLGLKQDVIYQAIQQALHVSCTTRQSRKGEISSWKA
                     YAPAHSGKLAIEAVDRVMRGEGAPSPIYEGEDSVIAWLLDGPEAHYVVPLPAPGEAKR
                     AILDSYTKEHSAEYQSQALIDLAFRMREKVENFGDVEKIVIHTSHHTHYVIGTGANDP
                     QKMDPKASRETLDHSIMYIFAVALQDGTWHHVDSYAPKRASRADTVRLWHKIETTEDP
                     EWTRRYRATDPSELSFGGRAEIFMRDGSVIVDEMAVANAHPLGARPFGRDDYIRKFQT
                     LTDGIITTRESNRFLEAAQELPRMPAGDLHRLNVALPAGTLVVGKPGIL"
     gene            8505..9500
                     /locus_tag="VHX39_18730"
     CDS             8505..9500
                     /locus_tag="VHX39_18730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-carbamoyl-D-amino-acid hydrolase"
                     /protein_id="HEX3993214.1"
                     /translation="MSRIITVAAAQLGPIQQAEPRSVAVARMVRLLERAHKRGVELVV
                     FPELALTTFFPRHYHEDIAEADGWFETTMPSNETAPLFEAAQRYGIGFHLGYAEIAHE
                     ADETGHVRKRRFNTSILVSPQGDVLLKYRKIHLPGHAEYDPKRKVQHLEKRYFEVGNL
                     GFPVIRSPMGGLDGVNLGMMICNDRRWPEAWRVLGLQSVELVALGYNTPSLNMEAGGF
                     EAHHLRVFHSHLSIQAGCYQNACFAAATAKAGVEDGCELFGHSIIVNPQGEIIAMAAS
                     WDDELITADCDLDLCTLGRTTIFAFDKHRRPEAYERITGQAGAVAPPVWQKPSPA"
     gene            complement(9561..9803)
                     /locus_tag="VHX39_18735"
     CDS             complement(9561..9803)
                     /locus_tag="VHX39_18735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993215.1"
                     /translation="MPEASTAPASRQVSLSPELARSVEDYRLANRLGSESDAIRALIE
                     LGLAAGPRPVRRSVGPEDEARSGPEAIERPRSELDD"
     gene            complement(10048..10257)
                     /locus_tag="VHX39_18740"
     CDS             complement(10048..10257)
                     /locus_tag="VHX39_18740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993216.1"
                     /translation="MRKLILSAVMASGLAVGLSTAAFAVPAIPLSGFAVVAPSSMVQV
                     DYNWHHQHWKHREWDKRHHHWNYHN"
     gene            10577..>10982
                     /locus_tag="VHX39_18745"
     CDS             10577..>10982
                     /locus_tag="VHX39_18745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3993217.1"
                     /translation="MTDAVPHRAMITICAIGATLLQSLDQTIANVALPYMQGSFSASY
                     DEITWVLTSYITAAAIMTAPVGWMAVRFGRKPLFLGCIIGFTIASMLCAAAQSLAQIV
                     TFRLLQGVCSAALVPLSQATLLDIYPEERRGFA"
BASE COUNT         1934 a         3853 c         3200 g         1995 t
ORIGIN      
        1 gacgcctccg aagcaatcac cgtcttgctg ccggcgtcgg tatagccgcc ccagatgccg
       61 ttgatgtccg cggtgggacg cgcccaaagc cgctccagcg ccgagtagcc acgctccccg
      121 accggactgg tcagcccgat cccgcccagg aacgccgcct catcgaaacc cagcgcatcc
      181 cactgcgccc gctgcgagtt ggaaatcgga gcgaccttgt catagaaacc cggcagttgg
      241 atgcggccgt tctcgtcctg cagttccccc aggatcttgg tcagcgcgtt gatcgggttc
      301 agcgccgacc cgccatacag ccccgagtgc aaatcacggt tcgccgcctt tagcgtcacc
      361 tcggcatagg tcatcccacg cagcctggtg gtgatcgccg gggtctcggc gtcccacatc
      421 ccggtgtcgc tgatcagcgc gatgtccgcg gccagttccg ccttgttctc ccgcaggaac
      481 gggtcgaggc tgaccgaacc gacctcctcc tctccctcga tcagtacggt aatgcgcgcc
      541 ggaatgccgc cgccggcgct atgccacgcc cgcagtgcct ccaggaacat cagcgtctgg
      601 cccttatcgt cgaccgcgcc gcgagcgaca tagcgcttgc cgcgcgggcc atcgaccagt
      661 tgcgggtcga acggatcgct gtgccacagc gacagcggat cgaccggctg cacgtcataa
      721 tgcccgtaga acagcacatg cggccctgcg tagtccgccg gcccggccag gtgacccacc
      781 accaccggat gccccgcggt cggccgcacg gcggcctcga atcccaggcc ggccaactgc
      841 tcgcaccacc actcggccgc cttgacgcag tccgccgcat gcgcgggctg ggcgctaatg
      901 gacttgatac gcagcagatc gaacaaattg gcccgcgacg ccaccagatt ggcatcggcg
      961 tggtccagga cggcgttcag ggtcgattgg cttggggcag gcatgcggat ctcccgtgtc
     1021 gatgccccat cagtagccga tccggaccac cattcgccag acggccacgc accagacggg
     1081 cacgcaccag acgggcacgc accagacggc catacagtcg cgcccgcatc gacgcgacgc
     1141 gcgcgaacct gttatgaccc gcgtatggat gtttgcttca tcgttcccgg gccgctcgcg
     1201 acggtctccg ggggtcacac ctacgatcgc cgcatggccg acggtctgcg caccctggga
     1261 cacaccgtgc atgtggtgga gttggacggg cgcctgcccg accccgacca ggccgcgatc
     1321 tacgccgctc ggacggcatg ggccgcgctg cccgccgaca gcgtcaaact gatcgacggc
     1381 ctcgccctgc cggccttcga cggcctgcca ctgcaccagg tgacggcgtt gatccaccac
     1441 cccgcctctt tcgagaccgg cctgccggaa gaaaccgccc accgcctgca cattaccgag
     1501 gccgcaatgt tccgcgacct gccccgcctc gtcgtgacca gccagcacac cgccgaacgc
     1561 atcgtcaagg aattcgccac cccgtccgaa catatcagcg tcgtcgtccc cggcatcgac
     1621 gacctgccgc gctgcaacgg gtcggccggc tcgccctgcc agatcttgtc cgtgggcgca
     1681 ctcatcccac gcaagggcca cgacgtgctg ctgcgtgccc tggctcgttt gttcgacctg
     1741 gactgggaac tgaccctggc cggctccgcc gaccgcgatc cggtgcatgc caacggcctg
     1801 catgccctgg ccgacgaact ggccatcacc cgccgcatcc atttcgccaa cgaggcgacc
     1861 gagacgctgt gggccggcac cgacctgttc gccctgacat cgtatttcga gggctacggc
     1921 gtcgccatcg ccgaagccct gcggcgcggc ctgcccgtcg cggtaaccaa tgtcggcgcc
     1981 gtgcctaccc tggtcggacc cgaggcaggg atcgtctgcg cacccggcga cgtcgagcaa
     2041 ctatcgaaag cgctacgccg gctgattttc gatcggccaa tgctgcacga tttggcagag
     2101 atcgcctggc aatccggcca atcgctcccg tcatggaacg aacaagccgg ccacctcgcc
     2161 gccgtcctgg ccggccagga tctggcagac tgatctacgt gtctatgcgc gcctcagcgg
     2221 taggatatcg gttcagccat ccgtgtttgc ctgtgatgtg tgccgccagc cttcgaacag
     2281 tctcccggtc agtctcgaag actgcatcga catgtttcgt ggcgacccgt cagtcgaacg
     2341 tcagcgtgag ggcggagccg ccatagacgg cgatttcaaa agtcatcccc tcggcccatg
     2401 ccgcgcggcc aaggtcatcg actgcccgca tcacccataa gatagaccgc gctacggtcc
     2461 attacacgga cttggaccag ggtcgccccg aggacaaggt ttgcgccgtc cgcattcggc
     2521 gaaccgaaac caggcctcga atgaccacga ggcagacaag gtatcgctga tcgcgcaatc
     2581 acgtgcgttg gacgttccgt ccaactcagt catgttctaa acgatcgatc gcgtgcgccg
     2641 cgcgtccagg acccggcggg acgatgcttg caacagggag gccgaacaat gctgctaggt
     2701 gtgatcgccg acgatttcac gggtgccacc gatctgtgct cgatgctggt gcgcggcggc
     2761 atgcggacag tgcaactgat cggcgtgcca tcgcccgacc tgccggtgcc cgacgcggat
     2821 gccgtggtgg tagcactgaa atcacgcacc gcccccgtgc gccaggccat cgacgaaagc
     2881 ctcgccgccc tcaaatggct tcaggccgcg ggcgctcggc agtacttctt caaatactgc
     2941 tcgaccttcg acagcaccga ccagggcaac atcggacccg tggccgacgc gctggtggcg
     3001 gcgctcgatt gtggcttcgc actggcctgc ccggcattcc cgaccaacgc gcgcaccgtc
     3061 taccagggct atctgttcgc aggcggagtc ccgctgaacg aaagcggcat ggaaaatcat
     3121 ccgctgacac ccatgaccga cgccaacctg gtgcgcgtgc tgtcgcgcca gaccgagggc
     3181 accgtcgggc tggtaccctt cgtcaccgtc gaccagggcg cacacgcgat ccgcgacgca
     3241 atgacgcagt tgaaggaacg cggccgccgc tatgccatcg tcgatgccat caccgacgcc
     3301 catctggttt cgatcggtga agccgccgcc agccacgcgc tgatcaccgg cggatcaggc
     3361 gtcgccatgg gcctgccggc aaacttccgc cgctcgggat tgttgcctga cgcgatcgat
     3421 ccgggcgcgc tgccgaggat cgagggcgcc ggcgccgtca tcgccggttc atgttcccga
     3481 gcaacgttgg cccaacttgg ttacgcccga gcccatctgc cgatgttcga actcgacgca
     3541 atggccacgc cggacgcggc ggcgctcgcc gaggccgcac tgacatgggc atccgacaag
     3601 atcggcgaca aaccgctggt catcgccgcc tccgccccgc ccgacaaagt cgccgcactg
     3661 caggcacgcc tcggacgcga tgccgccggc gcgctgatcg aggacgccgc tgcccgcatc
     3721 gccgaaggcc tggtcgcccg cggcgtccgc aaactcgtcg tcgccggcgg cgaaacatcc
     3781 ggttcggtcg ccggacggct tggcgtgcgc agcctgcgca tcggcgtgga gatcgatcca
     3841 ggcgtgccct ggacattcgc cgaaggacgg ggacccggcc tgatgatggc gctgaagtcc
     3901 ggcaacttcg gtgccaccga cttcttcctg aaagcgttcc gtgtgctgga aggctgatcc
     3961 ccatgaccga acacgacacc cgcatcctgc tgagtgaact cggcgccagc ctgttcacgc
     4021 gcggcttttc cgtcggcagc gccggcaaca tcagcgtgcg actgccggac ggctatctga
     4081 tgacgccgac caattcgagt ctgggcagac tcgatcccga ccgcctgtcc aaactcgacc
     4141 cggcattcca gcacatcggc ggcgacaaac cgtcgaagga agtgttcatg caccgggcat
     4201 tctaccaggc gcgtcccgag gcaggcgcgg tggtgcatct gcattcgacc cacgcgacgg
     4261 cggtgtcctg cctcccagac gtcgaagcct ccaatccgat cccgccgctg acaccgtatt
     4321 tcgtgatgcg ggtcggccgg cacatgccga tcgtcccata ctatcggccc ggcgatccag
     4381 cgatggaact ggcgatcaac accgcggcgc aggatgcacg cgccgtcctt ctcgccaacc
     4441 acggccccgt gatctccggc aagacgctga ccgacgcggt ctacgccgcc gaggaactgg
     4501 aagaagccgc caagctcttt ctgatgctgc acagccaggg acgaccgccg cggctgttga
     4561 ctgacccaca ggtcgacgat ctgctggcca ccttccagta aaccggttcg cgcacggcac
     4621 ccgaggaaaa ggcgccacca gggcgccttt tccgtcaagc atcgcggttg gcgattattc
     4681 gttcgattcg ctcgcggcga ttggtgccgc ttccggcgcg ggtgccgatg tggtcatggc
     4741 tttcgccttg cgcacaccct tcttcgcaac cgccttcttg gtgaccgcta ctttcatcgc
     4801 cgctttcttc acagcggcct tcttcggcgc tgctttcttc gccgcgccct tggcggcaac
     4861 cttcttcggc gcagccttgc cggcagcctt cttcggcgcc gccttggcaa cagccttctt
     4921 cggagcaacc ttcttcaccg cggccttctt cggcgcagcc ttgctggcag ccttcttcgg
     4981 tgccgccttg gcaacggcct tcttcggagc agccttcttc accgcggcct tcttcggcgc
     5041 ggccttggcg gccgccttct tcggcgcggc cttcttggca gcggctttct tcggcgccgc
     5101 cttgacgacc gccttcttcg cggcagcctt cttgactgcc ggcttcttta ccgccgcttt
     5161 cttggtggcg gctctcatcg ccatcgcctg cgcacccacc gccttgccgg cgggaacgtc
     5221 attcatcgtg tcgtcattac tcacctgcgg aactccttgt tgaacgtgcc gtctctgtct
     5281 ggtgctttcg gcgaagccat agttcaggtc gcatgccggg caggcgcgat ggcatgaagg
     5341 cgctgcggat ttgtttcatc ggcaaaccgg ctggcatacg tatcaacccg gcgcgtatcc
     5401 gggtgcttgc tggactcgtc tgcggcttcc caaggtcgcg gtccattgac cgtccttact
     5461 gttgaacgtg cccatccatc gagagtctgc acacaaagtg cgaatcgatt cgcgaacacg
     5521 gattccgcta ttcatcgtct cgtccacacg tgtcaacgaa aagcaacggt ttcgcgacat
     5581 atttatgaaa aaaattttcg tgcgtagcgt ttcagggacg aatggaaaaa caaaaccgcc
     5641 gcgacatccc tgccgcggcg gttccgatcg acttggaaaa aaccgatcag ccgcgctgat
     5701 cgatcggcac gaatgtcagg ttttccggcc cggtatagtt ggccgttgga cggatcagct
     5761 tgttgtcgac gcgctgttcc atcacatgcg ccgcccagcc cgaggtgcgc gcgataacga
     5821 acagcggcgt gaacatcgcc atcggcacac ccagcatgtg gtagctgatg gcggagaacc
     5881 aatcgaggtt ggcgaacatc ttcttcgcat cccacatcgt cgattcgatg cggtcggcaa
     5941 tgtcgaacat cttcatcgat ccggcatgct gcgacagcct gcgcgccact tccttgataa
     6001 ctttgttgcg cggatcggcg attgtataaa ccgcatggcc aaatccgatc accacctgct
     6061 tcgcttcgat gcgcttgcga atatccgcct ccgcctcgtc cggcgacgca tagcggttct
     6121 ggatctcgaa agagacctcg ttggcaccgc catgtttcgg cccgcgcagc gcgccgatac
     6181 ccgcggtcag cgccgagtac atgtcggccc cggtgcccgc caccacccgg caggtgaagg
     6241 tcgaagcgtt gaactcatgt tccgcataca gaatcaaaga cgtgtgcatc gcacgcacga
     6301 acatctccga cggcgccttg ccgtgcagca gatgcaggaa gtgcccgccg atggaatcgt
     6361 cgtcggtttc cacgtcgatg cgcttgccgt tatgcgcgta gtggaaccag tacagcagca
     6421 ttgaccccag acatgccatc aaccggtcgg cgatatcgcg cgcgcccggc gggttctggt
     6481 cttccttctc cggcagcacg cagcccagcg cggagacacc cgtgcgcatc acatccatcg
     6541 gatgcgacgc cgccggcaac gcctccagcg ccagcttcac cgcgttcggc aaaccacgca
     6601 gcgccttcag cttcgccttg tagccagcca gctcggcgcg cgtcggcaac gcaccatgca
     6661 ccagcaggaa tgcgatctcc tcgaactcgc acgtgtcggc gacgtccaga atgtcgtagc
     6721 cgcgatagtg cagatcgttg ccggaccgcc cgacggtgca caaagccgtg ttgccggccg
     6781 tgacccccga cagtccgaca cccttcttcg ctctgttggg cagcgacgtt gtctcgctca
     6841 taggcgtatc tccttgcttc gggttacaga ataccgggct tgccaaccac cagcgtgccc
     6901 gccggcaacg ccacgttcaa ccggtgcagg tcgcccgccg gcatgcgagg cagctcctgc
     6961 gccgcctcca ggaaccggtt cgattccctg gtggtgatga tcccgtcggt cagcgtctgg
     7021 aacttgcgga tatagtcgtc gcggccaaac ggcctggcac ccagcggatg tgcattggca
     7081 accgccatct catcgacaat cacgctccca tcccgcatga aaatctccgc tcggccgccg
     7141 aacgacaact cgctcggatc ggtcgcacga tagcggcgcg tccattccgg atcctcggtc
     7201 gtttcgatct tgtgccacag ccgcacggtg tcggcgcgcg acgcccgctt cggcgcataa
     7261 ctgtcgacgt gatgccaggt gccatcctgc agcgcgacgg cgaagatata catgatcgag
     7321 tggtccagcg tctcccggct cgccttcgga tccatcttct gcggatcgtt ggcaccggtg
     7381 ccgatcacat agtgcgtgtg atggctggta tggatcacga tcttttccac atcgccgaag
     7441 ttttcgactt tctcccgcat gcggaacgcc agatcgatca gcgcctgcga ctggtactcg
     7501 gcgctgtgtt ccttggtgta gctgtccagg atcgcgcgct tcgcctctcc aggtgccggc
     7561 agcggcacga cgtaatgcgc ctcgggcccg tccagcagcc acgcgatgac gctgtcctca
     7621 ccttcgtaga tcgggctggg cgcgccttcg ccacgcatca cccgatccac agcctcgatc
     7681 gccagcttgc cggaatgcgc cggcgcatac gccttccacg agctgatttc acccttgcga
     7741 gactggcggg tggtgcaact gacatgcaac gcctgctgga tcgcctggta gatgacgtcc
     7801 tgcttcaacc ccagcagcgt gccgatacca cccgcctgcg cggggcacag atgcgcaatg
     7861 tgatcgatct tgtgctcgtg caggcagatg gcgcgcacga ggttgatcat gatctcgtag
     7921 cccgtggcga taccgcggat caggtccctg ccggatttct ccatcgtctg cgccaccgcc
     7981 aggatcggcg ggatgttgtc gccgggatgc gagtagtcgg cggccaggaa cgtgtcgtgc
     8041 atatccagct ctcgcaccgc cacgccattg gcccatgccg cccattccgg gctgacgcgc
     8101 ttgctggacg gcacgccgaa caccgacgcg ccattcttgt tcggtcgcgc cagcgccatg
     8161 tcgcgcgccg acacgatcgc gtgccgattg gccgacgcaa tcgccaccga ggcattgtcg
     8221 atcacccggt tgacgatcat cgccgccaca tccttggtca ccgcgacttt gtccgccgcc
     8281 accccggcaa atttccacgc cagttggtct tcccgtttca gccccgcctt cgatgggctg
     8341 accctcacat catgatcgat cattaccgtc ctccctgcct gtccggcccg cccgtcaggc
     8401 caccttctcg cttcgtagtg tcacgccacc ggaacggcaa gtttaggtgg ttgcgtatct
     8461 gggtagccgt ggcatcgtga cacggtctcg gaaggagggt ttgcttgtcc cgcatcatca
     8521 ccgtcgccgc cgcccagttg gggccgatcc agcaagccga accgcgttcc gtcgccgtcg
     8581 cccgcatggt ccggctgttg gaacgcgcgc acaagcgcgg cgtcgaactc gtcgttttcc
     8641 ccgaactggc gctgaccacc ttcttcccgc gccactatca cgaagacatc gccgaggcgg
     8701 atggctggtt cgaaaccacg atgccctcga acgaaacggc accgctgttc gaagccgcac
     8761 aacgctacgg catcggcttt cacctcggat acgccgagat cgcacacgaa gccgatgaaa
     8821 ccggccacgt gcgcaagcgc cgcttcaaca cttcgatatt ggtcagcccg caaggtgacg
     8881 tgctgctgaa ataccgcaag atccatctgc cggggcacgc cgaatacgac cccaagcgca
     8941 aggtgcagca tctggagaaa cggtatttcg aggtcggcaa cctcggcttc cccgtcatcc
     9001 gctcgccgat gggcgggctg gacggcgtca acctcggaat gatgatctgc aacgatcgcc
     9061 gttggcccga agcctggcgc gttctcggcc tgcaaagcgt ggaactcgtc gcgctgggat
     9121 acaacacccc aagcctcaac atggaggccg gtggtttcga ggcgcatcac ctgcgggtct
     9181 tccactcgca tctgtcgatc caggccggct gctaccagaa cgcctgcttc gccgccgcca
     9241 ccgccaaggc cggcgtggag gacggctgcg agttgttcgg ccactccatc atcgtcaatc
     9301 cgcagggcga gatcatcgcg atggcggcaa gctgggacga tgagctgatc accgccgatt
     9361 gtgacctgga tttatgcaca ctgggccgga ccacgatctt cgccttcgac aagcaccgcc
     9421 ggccggaagc ctacgaacgg atcaccggac aggcgggcgc ggttgccccg ccggtctggc
     9481 aaaagcccag ccccgcctaa gcccgcatcg acggcgaagc caggccacca ttgcttgctc
     9541 gttacggtcc aacggcatgc tcaatcatcc agctcgctgc gaggccgctc gatcgcctcc
     9601 ggaccactcc gcgcctcgtc ctcgggacca accgaccgcc tgacagggcg cggacccgcc
     9661 gccagcccaa gctcgatcag cgcccggatc gcgtcggact cactgccgag tcgatttgcc
     9721 aaccgataat cctccaccga ccttgccaac tcgggggaca ggctgacctg tcgggacgcg
     9781 ggggccgtcg acgcttcggg catggggaca aatccatagc tgctgggaat cagatgtgtc
     9841 cgtcagcaac gcacgccggc cagccccggt tcaatcgcat gctcaccgaa cgtcccgcat
     9901 cgatgttcgg aaacagggac gcccgcggcg gtcatccgcg cgggcgtcgg tctgcaccag
     9961 gctttcaact cactatttcg aatccatcct ggtgaccggc accaacggac acctgcgtca
    10021 ccctggagga cacgaatccg aggctgctca gttatggtag ttccagtggt gatgcctctt
    10081 gtcccactcg cgatgtttcc aatgctgatg atgccagttg tagtcgacct gcaccatgct
    10141 ggacggcgcc acgaccgcga acccggacaa cggtatcgcg ggaacggcga acgccgcggt
    10201 ggaaagcccg accgccaggc cggaagccat caccgccgaa aggatcaatt tacgcatgct
    10261 cactccgtaa aacatcaagg ggttgattga agatcgtccc gagataaggc ccgacaagac
    10321 aaccgctcga aggcattttg atggcaccgc gggctgcaac attcatgtga tcgcacccca
    10381 acgattacgc aggaccggga ccacggttca ctgaagccac cggcgagcgg ttagcctgcc
    10441 cgaaacatgc gcagcctgta ccgcctgccg cgccctgtcc accagccccc ttgatttgac
    10501 ctgcgcgtgg ctttgccgga ccatcggcac ccgagagacg tccagcaaga agtgacaaat
    10561 ggccaacgag gccccaatga ccgatgccgt tccgcatcgg gcaatgatta ccatttgcgc
    10621 catcggcgcc acattgctcc agtcgctgga ccagaccatc gccaatgtgg cgctgccgta
    10681 tatgcaaggc agcttctcag ccagctacga cgaaatcacc tgggtcctga catcctacat
    10741 caccgccgcg gcgatcatga ccgcaccggt gggctggatg gccgtccgct tcggccgcaa
    10801 accgcttttc ctgggctgta tcatcggttt cacaatcgcc tcgatgctgt gcgccgccgc
    10861 ccagtcgctg gcacagatcg tcacgttccg cctgctgcag ggggtatgca gcgccgccct
    10921 cgtcccgctg tcccaggcga cgctgctcga catctacccg gaggagcggc gcggattcgc
    10981 ca
//
LOCUS       DATAVD010000979         4052 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_281065, whole genome shotgun sequence.
ACCESSION   DATAVD010000979 DATAVD010000000
VERSION     DATAVD010000979.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4052
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281065"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..487)
                     /locus_tag="VHX39_18750"
     CDS             complement(<1..487)
                     /locus_tag="VHX39_18750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008495446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3993218.1"
                     /translation="MKPRSAWPGFCAVLAVMAVVMVGLPMVTGLFGLVQATVFIAMAV
                     LALSQGFIWGYGGIMSFGQSAFFGLGGYTYAVAVMNMGDSTVPFFLAILLPAVFAALL
                     GYFMFYGRISDAYVGVITLTVTVILFNVVNSTAGDVYHIGNAPLGGFNGMPSVPPLNM
                     PG"
     gene            complement(484..1350)
                     /locus_tag="VHX39_18755"
     CDS             complement(484..1350)
                     /locus_tag="VHX39_18755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3993219.1"
                     /translation="MALAALIGFNVLNSIAALVLLSIGLGVIFGMMKIINLAHGEFLM
                     LGAYATVVTTNAGLNLFVAMLIVAPVFVGLIGFVVERGIIRFLYGRMIDTMLATWGLS
                     LFLVGIVTTCFGTTVKGVAAPLGGFSIGPYQASTYSVFMIVMAVIVVAGIFVLLRFTR
                     FGLIVRATMQNPDMAAALGVSPPRIYMATFVLGAALTGLAGGVLVPVSGVAPTMGAAY
                     VARAFITVIGGGPAIITGSGLASVLFGFIDQVVTFQATPVFGQVALLVSAVVMIRILP
                     QGITGRFFRRSL"
     gene            complement(1359..2597)
                     /locus_tag="VHX39_18760"
     CDS             complement(1359..2597)
                     /locus_tag="VHX39_18760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3993220.1"
                     /translation="MIRNRRQVLQSAAAMATSALAAPFIRPAGAAEPIKVGSLLDLSG
                     PIGTSGQPMYDAIQLAVEEVNGAGGLLGRQVQLVNYNTQSTIQMYSQYAQQLALKDGV
                     AVVHGGITSASREAIRPVFDRYRVLYFYNVLYEGGVCDRNTFCTGTTPAQTVNKLVPY
                     ALKTWGKKVYIVAADYNYGQITAKWMTKYARDGGGTVQAVEFFPLDVTSFTATISKIQ
                     EAKPDVVLSALVGSNHTAFYRQWAAAGMKSKIPIASTTFGLVNELATINPAESDGIVT
                     SYGYYQELKTPKSVAFVDAIHKKFGADVPYISELAAATYEGFYLWAEGVKKAGSIDRM
                     KVIEALETGLSFDGPSGKVTLDHATHHVIRNAYLGKAENKTWDVIASYPDQPPSDTAA
                     VCNLIKAPATDKQYVIDIKT"
     gene            complement(2685..3446)
                     /locus_tag="VHX39_18765"
     CDS             complement(2685..3446)
                     /locus_tag="VHX39_18765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3993221.1"
                     /translation="MDLGLHGRKALVTGATKGIGLSIAEHFAREGAAVAICARQAEEV
                     AATVARLRTMGIAATGRALDVSDAPALQAWIGDAATELGGLDIVVSNVSALAIGNDDA
                     SWRAEFDTDMMGTVHVVDAAMPWLEASDAGSIVIISSVSGREVDFAAGPYGVMKAALI
                     HYAQGLAFQLAAKGIRANTISPGNTYFEGGVWHRIERENPSLYAGALALNPTGRMGRP
                     EEMARAAVFLASPAASFISGTNLVVDGALTRGVQF"
     gene            complement(3458..>4052)
                     /locus_tag="VHX39_18770"
     CDS             complement(3458..>4052)
                     /locus_tag="VHX39_18770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEX3993222.1"
                     /translation="ATLNQPLPEIVRKIDLDEQWVRWSDRVTLPYNPHIGTLSLSPEI
                     DSINSLTPDNHGGNMDLPDMGPGSITYLPVRTKGARLFIGDAHACQGDGEVCGVAVEY
                     PTVTTIRVDLIKHWAIEWPRLERGDFVMTIGSARPLEDATRIAYRELVRWMAAEYGYD
                     QWDAYMMLSQCGRVRLGNFVDPKYTVGAAILKKYLAK"
BASE COUNT          765 a         1304 c         1261 g          722 t
ORIGIN      
        1 cgcccggcat gttcagcggc ggcaccgacg gcatgccgtt gaaaccgccc agcggcgcgt
       61 tgccgatgtg atagacgtcg ccggcggtgg agttcacgac gttgaacagg atcaccgtca
      121 cggtcagggt gatcacgccg acataggcgt cgctgattcg cccatagaac atgaaataac
      181 cgagcaaggc cgcgaacacc gccggcagca gaatggccag gaaaaatggc acggtggaat
      241 cgcccatgtt catgacggcg acggcatagg tgtagccgcc caggccgaag aacgcggact
      301 ggccgaagct catgatgccg ccgtatcccc agatgaaacc ctggctgagc gccaataccg
      361 ccatggcgat gaacaccgtc gcctgcacca gaccgaacag gccggtgacc atcggcaggc
      421 cgaccatcac cacggccatg accgccagca ccgcgcaaaa gccaggccag gcactacggg
      481 gtttcacagg cttctccgga agaaacggcc ggtgatgcct tgcggcagaa tgcggatcat
      541 caccaccgcc gagaccagca gcgccacctg tccgaacacc ggcgtggcct ggaacgtcac
      601 cacctggtcg atgaagccga acaggacaga ggcgaggccg ctgccggtga tgatcgccgg
      661 gccgccgccg atcaccgtga tgaaggcccg agcgacatag gccgcgccca tggtgggtgc
      721 cacgccggac accggcacca gcacgccgcc cgccagcccg gtcagcgccg cgcccagcac
      781 gaaggtcgcc atgtagatcc gtggcggcga gacgcccaac gccgcggcca tgtccgggtt
      841 ctgcatggtg gcgcgcacga tcagcccgaa ccgggtgaag cgcagcagca cgaaaatacc
      901 ggccacgacg atcaccgcca tgacgatcat gaacacgctg taagtgctgg cctggtaggg
      961 accgatcgag aaaccgccga gtggcgccgc cacgcccttc accgtagtgc cgaagcacgt
     1021 ggtgacgatg ccgaccagga acaggctgag tccccacgtt gccagcatcg tatcgatcat
     1081 gcggccgtag aggaatcgga tgatgccgcg ctcgacgaca aacccgatca gtccgacaaa
     1141 caccggcgcc acgatcagca tcgccacgaa caggttcagc ccggcattcg tggtcaccac
     1201 cgtggcgtag gcgcccagca tgaggaattc gccatgcgcc aggttgatga tcttcatcat
     1261 gccgaagatc acgcccagcc cgatgctcaa cagcaccagg gcggcgatgc tgttcagcac
     1321 gttgaagccg atcaaagctg ccagggccat ggcggggctc aggtctttat gtcgatcacg
     1381 tactgcttgt cggtagccgg cgccttgatc aggttgcaca cggcggcggt atcggagggc
     1441 ggctggtcgg gataagacgc gatcacgtcc caggtcttgt tctcggcctt ccccagatag
     1501 gcgttgcgga tgacgtggtg cgtcgcgtga tccagcgtga ccttgccgga cgggccgtcg
     1561 aagctcaggc cggtttccag cgcctcgatg accttcatgc ggtcgatact tccggccttt
     1621 ttcacaccct cggcccacag ataaaagcct tcgtaggtag cggcggcgag ttcgctgata
     1681 tagggcacgt cggcgccgaa tttcttgtgg atggcgtcca cgaacgccac gctcttcggc
     1741 gtcttcagtt cctggtaata gccgtaggac gtaacgatcc cgtcgctctc cgccggattg
     1801 atggtggcga gttcgtttac cagcccgaac gtcgtggatg cgatggggat cttgcttttc
     1861 atccccgccg cggcccattg gcgataaaac gcggtgtggt tggacccgac cagcgcggac
     1921 agcacgacgt ccggcttcgc ctcctggatc ttgctgatgg tggcggtgaa gctggtgaca
     1981 tcgaggggga agaattcgac cgcctgcacg gtgccgccgc cgtcccgggc gtatttggtc
     2041 atccatttcg cagtgatctg gccgtaattg tagtcggccg cgacgatata gaccttcttg
     2101 ccccaggtct tcagggcata gggcaccagc ttgttgacgg tctgcgccgg ggtcgtgccg
     2161 gtgcagaagg tgttgcggtc gcacacccca ccttcgtaca gcacgttata gaaatacagc
     2221 acgcgataac ggtcgaacac cggccgtatc gcctcgcggg aggcggaggt gatgccgcca
     2281 tgcaccaccg ccacgccatc cttcagcgcc aattgctgcg cgtactggga atacatctgg
     2341 atggtggact gcgtgttgta gttgaccaac tggacttgcc ggcccagcag gccgccggcg
     2401 ccgttcacct cctccaccgc cagttggatc gcgtcgtaca tcggctggcc cgaggtgccg
     2461 atcggtccgg acaggtcgag caaactgccc accttgatcg gctccgccgc gccggcgggg
     2521 cggatgaacg gtgcggccag ggcggaggtc gccatcgcgg cggcggattg caggacttgt
     2581 cggcggttcc ggatcatgct gcttccctca ggtcgttgtt atgcgtatgg ccgtgtggat
     2641 gcacccaaga cttgtgccag tttcgatcgt tgcgaatccc cagactaaaa ctgaacaccg
     2701 cgtgtcagtg cgccgtcgac gacaaggttc gttccagaaa tgaagctggc ggcggggctc
     2761 gccagaaaca ccgcggcgcg cgccatttcc tccggccggc ccatgcgccc ggttggattg
     2821 agcgcgagtg cgcccgcata taacgatgga ttctcgcgtt cgatacgatg ccagacgcca
     2881 ccttcaaaat aggtgttgcc gggcgagatg gtgttggcgc ggatgccctt cgcggcaagc
     2941 tggaaggcca ggccctgggc ataatggatc agcgccgcct tcatcacgcc atacggaccg
     3001 gcggcgaaat caacctcgcg gccggacacc gaggagatga tcacgatcga cccggcgtcg
     3061 gatgcctcca gccagggcat cgccgcatca accacgtgca cggtgcccat catgtcggta
     3121 tcgaactcag cccgccacga cgcatcgtcg ttgccgatgg ccagtgcgct gacattggat
     3181 acgacgatat ccaggccgcc caactccgtc gcagcatcgc cgatccaggc ctgcaatgcc
     3241 ggtgcgtcgc tgacatccag tgcgcgtccg gtcgctgcga tgcccattgt ccgcaggcgg
     3301 gcgacggtgg ccgccacctc ttcggcctgt cgcgcgcaga tcgccacggc ggcgccttcc
     3361 cgagcgaaat gttcggcgat tgacaggccg atgcccttcg tcgcccccgt aacaagtgcc
     3421 ttgcggccgt gcaggcccag atccatcggt gcctccttta tttcgccagg tatttcttca
     3481 ggatcgccgc gcccacggtg tatttcgggt ccacgaaatt accgagccgg acgcggccgc
     3541 attggcttag catcatgtag gcgtcccact ggtcgtagcc gtattcggca gccatccagc
     3601 gcaccaattc gcgataggcg atccgggtcg catcctccaa cggccgtgcg ctgccgatgg
     3661 tcatgacgaa atcaccgcgt tccagccttg gccattcgat cgcccagtgc ttgatcagat
     3721 cgacgcggat cgtcgtgacg gtgggatatt ccaccgcgac gccacacact tctccgtcgc
     3781 cctggcaggc atgtgcgtcg ccgatgaaca accgggcgcc cttggtgcgc accggcagat
     3841 aggtgatgct gcccggtccc atatccggca gatccatgtt gccgccgtgg ttgtcggggg
     3901 tcagcgagtt aatcgaatcg atttccggcg acaggctgag cgtgccaata tgcggattgt
     3961 acggcagcgt cacgcgatcg ctccagcgca cccattgctc gtccagatcg attttgcgga
     4021 cgatttccgg caacggctgg ttcagcgtgg cg
//
LOCUS       DATAVD010000980         3741 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1023259, whole genome shotgun sequence.
ACCESSION   DATAVD010000980 DATAVD010000000
VERSION     DATAVD010000980.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3741
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1023259"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..547
                     /locus_tag="VHX39_18775"
     CDS             <1..547
                     /locus_tag="VHX39_18775"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX3993223.1"
                     /translation="DVNAVCHHHSHAVLPFCISGRALLPVFHLPAVIGTVPFWDQRDE
                     FGDTNMLVVKPQEGASLARALGSDWMVLMRRHGATVAGTSLRELTFRTVFGCENAALQ
                     SAAMAHGHVDALSPGEIALSSAHSVRPPSINRAWNYWVRHVGKAGLMPAVVGAAKRSG
                     PAATRRSKSKAAPKRKARKHR"
     gene            647..1258
                     /locus_tag="VHX39_18780"
     CDS             647..1258
                     /locus_tag="VHX39_18780"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX3993224.1"
                     /translation="MPKKATPKPAKSLQSPRLPKLSQDALTTEQQTLAESIRSGPRGE
                     FKMSGPFAIYLHSPAFGELAQKLGGHLRFKTSVPPRLSEFAILCTAQHWKAQYEWAMH
                     APMAEKQGVKPQTIKDIQAGRAPKAAPRDEMAIYDFVKELYAKRRVSTPTFNRAKKVL
                     GDAGVVELVGILGYYAMVSMTLNTFKAPLPEGMAVPFAEPAAG"
     gene            complement(1403..3526)
                     /locus_tag="VHX39_18785"
     CDS             complement(1403..3526)
                     /locus_tag="VHX39_18785"
                     /inference="COORDINATES: protein motif:HMM:NF019157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /protein_id="HEX3993225.1"
                     /translation="MVGITKARGLGAAVVLSAGALWPVAAQADQPGIRYTITSPDTSP
                     VGYITANSVSIKVTGPSGQPPSSEAIRHFKLTLNGIHEYNALSQEGTATLTGLKVGSN
                     TILLFDSDNPREMVAQLVVERATAPAVSCASLAQLTNFPIHPTGFDGGTIITRAVLNP
                     ATATLPEHCQIDGYIRQRTGIAGPSATPQQYQTDFEVRLPTLWNGRYMFQGGGGTEGS
                     LPAATGAQTGTASFPELRNGWAVASQDGGHETSQLPPTITATSSSPEILQVNMFYPDQ
                     QAVKDWASNAIDMTTQTAKYLIDAYYGRPADYSYFVGCSTSGRQAMAMTQLFPNYYNG
                     VIAGDPFYLPPDISLSETWGLEQIISISPKDSNGNPIYTQGFSASDQNLFTNAILAAC
                     DAVDGLVDGVIDNRAACHFDPATFVFPASGPYGAIAPGQPLQCRGAKVATCLSPAQVA
                     AVKSIAQGPRTSRGAPIVSPDGTLLSGYPFDGGFMQPSGIPTRDIGTTTTPPGNIGLG
                     TGQLPLFWFTVPDSKFNPLTFDYNKDIGLVTAHSPAVNKSTNISTFIRNGGKLIFYHG
                     LSDSGPPWPYTVEYFHRVAELQGKGGRDDRLRQAGDFMNLYLVPNMGHCGGNASTDKF
                     DMLTPMVNWIENKTAPDTIVATGVNFSPALGTLQNLPTTRSRPLCPYPETLRYTGRKG
                     GDISVAANYSCIKEDFYRFDFEDHR"
BASE COUNT          746 a         1090 c         1163 g          742 t
ORIGIN      
        1 cgacgtcaac gcggtgtgcc atcaccattc gcatgcggtg ctgccgttct gcatttccgg
       61 ccgggcgctg ctgccggtat tccacctgcc ggcggtgatc gggacggtgc cgttctggga
      121 tcagcgcgac gagttcggcg acaccaacat gctggtggtc aagccgcagg agggcgcctc
      181 gctcgcccgc gcgctcggca gcgactggat ggtgctgatg cgccgtcatg gcgccacggt
      241 ggccggcacc agcctgcgcg aactgacctt ccgcaccgtg ttcggctgcg agaacgcggc
      301 gttgcagagc gcggcgatgg cgcacggcca cgtcgacgcg ctctcgcccg gcgagatcgc
      361 gctgtcgtcg gcgcacagcg tgcggccgcc ctcgatcaac cgcgcctgga attactgggt
      421 tcgccatgtc gggaaagccg gcctgatgcc ggcggtggtc ggcgccgcca agcgcagcgg
      481 ccccgctgca acgcggcggt ccaaatcgaa ggccgcaccg aagcgtaagg cgcgcaagca
      541 ccgttgaagc cgagccacaa ttcttgcaca gtccgtggct ggctcgtcga tcaccattcg
      601 ataagctgac ccgccaatcc cgctcgcgcg ctgccacgag gaaaccatgc ccaagaaagc
      661 cacgcccaag cccgccaagt cgctgcaatc gccccgcctg ccgaagctgt cgcaggacgc
      721 gctgaccacc gagcagcaga cgctcgcgga gtcgatccgc tccggaccgc gcggtgaatt
      781 caagatgtcc gggccgttcg cgatctatct gcattcgccg gcattcggcg aactggcgca
      841 gaagctcggc ggtcatttgc gcttcaagac cagcgtgccg ccgcggcttt cggaattcgc
      901 catcctgtgc accgcgcagc actggaaggc gcagtacgag tgggcgatgc atgcgccgat
      961 ggcggagaag cagggcgtca agccgcaaac catcaaggac attcaggccg gccgtgcgcc
     1021 gaaagcggcg ccgcgcgacg agatggcgat ctatgatttc gtcaaggagc tttatgccaa
     1081 gcggcgcgtc agcacgccaa ccttcaaccg ggccaagaag gtcctcggcg acgctggcgt
     1141 ggtcgagctg gtcggcatcc tcggctacta cgcgatggtg tcgatgacgc tcaacacctt
     1201 caaggcgccg ttgccggaag gcatggcggt gccgttcgcc gaacctgccg cgggctaaga
     1261 agcgatccgg ctgatcggct tggcaccggc gcgcatgata tccttcggcg ctgccggtgg
     1321 cggcgcgtcc gcgaagctgc tagatgccaa aatggtcgga tcggcctaaa tgccgatccg
     1381 accggtgacg caaacggttg gattagcggt gatcttcgaa gtcgaaccta tagaaatcct
     1441 ctttgatgca cgaatagttc gctgcaacgc tgatatcgcc ccctttccga ccagtatatc
     1501 gaagggtctc cgggtagggg cagagcggac ggctgcgtgt ggttggaaga ttctggagag
     1561 tgcccaacgc ggggctaaag ttgacgccgg tggcaacgat ggtatcaggc gccgttttgt
     1621 tttcgatcca gttgaccatc ggcgtgagca tgtcgaattt gtctgtcgaa gcgttgccgc
     1681 cgcagtgccc catgtttgga accaggtaaa ggttcatgaa gtctcctgcc tgacgaagtc
     1741 tatcatcacg cccacctttt ccttgcagct ccgccaccct gtggaaatat tcaacggtgt
     1801 atggccacgg cggaccagag tcgctcaggc catgatagaa gatcaatttg ccgccattcc
     1861 tgatgaaggt tgagatgttg gtcgatttgt tgaccgccgg cgagtgcgcc gtgaccagac
     1921 cgatgtcctt attgtaatcg aatgtgagcg gattgaattt cgagtcgggg acggtaaacc
     1981 agaataaggg caattggcct gtccccaggc cgatattacc gggtggtgtt gtcgtcgtgc
     2041 cgatgtcgcg tgtcgggatg ccggaaggct gcataaaccc gccgtcaaaa ggatatccgg
     2101 acaggagcgt tccgtccggt gaaacgatgg gcgcgccccg ggatgttctg ggaccctgcg
     2161 cgatgctctt cactgcggcc acttgtgcag ggctcaaaca ggtagccact tttgcgccgc
     2221 ggcactgcag aggctgaccg ggcgctatcg caccgtacgg cccagacgcg gggaacacga
     2281 aggtcgccgg gtcgaaatgg cacgcggccc ggttgtcgat cacgccgtcc accaagccgt
     2341 cgaccgcgtc acacgcggcc agaattgcat tggtgaacaa gttctgatcg ctggctgaaa
     2401 aaccctgcgt gtaaatggga tttccgttcg agtccttggg ggagatggaa atgatctgct
     2461 ccagccccca cgtctcactg agtgaaatat ccggcggaag gtagaaggga tcgcccgcaa
     2521 taacgccgtt gtaatagttc gggaacagtt gcgtcatcgc catagcctgc ctgccgctcg
     2581 tcgagcagcc cacgaaatag gagtagtcgg ctggccgtcc ataataggcg tcgatcaggt
     2641 actttgctgt ttgagtggtc atgtctatgg cgttggaggc ccaatccttc accgcctgct
     2701 gatcgggata aaacatgttc acctgaagta tctcaggtga gctcgaagtt gcggttatcg
     2761 ttggcggtaa ttgggacgtt tcatggccgc cgtcctggct ggccaccgcc catccgttgc
     2821 gcagttcggg gaaagaagcc gtgcccgtct gtgccccggt cgctgcggga aggctgcctt
     2881 cagtgccgcc accaccctgg aacatgtatc gaccgttcca gagggtggga aggcgtacct
     2941 cgaagtccgt ctgatattgt tggggagttg cggaggggcc ggcgatcccc gtgcgctgtc
     3001 ttatgtatcc atcgatttga cagtgttcag gcaaggtggc ggttgccgga ttcagcactg
     3061 cacgggtgat aatcgtccca ccgtcaaaac ccgtcggatg aatagggaaa ttggtaagct
     3121 gggcaagcga cgcgcagctt accgccgggg cggttgctct ttcgacgaca agctgagcaa
     3181 ccatctcccg aggattgtcc gagtcgaaca acaaaattgt atttgaaccg accttcagtc
     3241 cagtcagcgt ggccgtgcct tcctgcgaca atgcgttata ttcatgaatg ccattaagcg
     3301 tgagcttgaa gtgacgaatc gcttcactcg aaggcggctg gccggacggg ccggtaactt
     3361 tgatcgaaac cgaatttgcc gtgatgtacc cgaccgggga agtgtcggga ctggtgatcg
     3421 tatagcggat accaggttga tccgcctgcg cggccacggg ccacagcgcc ccagccgata
     3481 agacgacagc cgcgccaagt ccgcgagctt tggtgatgcc aaccatgtct ccatcctccc
     3541 tcgtcattgt tatgcgaact gctgttaata cgatccgggc agtttcagca atccgtctat
     3601 gccgaacgca atgagcatcc agtggcgaat tatggaagct ttttaaggat atggaatagc
     3661 gatggcggac tatcagatat cgtataaaga gatagatttc agagtcccac agcacgacta
     3721 cgcagcccga tggatctaaa a
//
LOCUS       DATAVD010000981         7877 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3069666, whole genome shotgun sequence.
ACCESSION   DATAVD010000981 DATAVD010000000
VERSION     DATAVD010000981.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7877
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3069666"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2259
                     /locus_tag="VHX39_18790"
     CDS             <1..2259
                     /locus_tag="VHX39_18790"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HEX3993226.1"
                     /translation="KRAAFAATLNAIVKAQPATPTATPPTTPPTAKPVTTVEGLKIPL
                     APDSLGAQVLLSASDFVNQLGNRATDALDTVQSLPLLYGWVVMMATNDTARGLLADVM
                     WRVALVVACAAAVEYGLRLAMRRPIRGLESLAAPPRHAEPEEPPEEPPEEPEPDEEDA
                     VARAEAGESEAPPPPRRRPSAWNLLKRVPLVIARLVLELVPVLGIVLVGHLIAGSALG
                     GHAGSRLIILAVVDSYAACAAMLCVVRMLLSPGTSRLRLFHLRDTTAAYLMYWSRRLI
                     LIAVFGYAIGEVGLLLGLSDIAHEALQKGIGLILHICLAIMVIQKRRAIRRRLRAPAG
                     ATGLTASLRNRFANVWHWIALFFLIAGWLVWAVEVPHGYAALLHYFIVTALVLIGARL
                     VLLVLLGVVDRFMQPVSQGEGFYPGMYARLGVYHPVVTVALRLTVYLLCVLGLLQLYG
                     LNTFLWLVESALGLRILSASGTLLVTIVLAFAAWEAINGGVQQHLDRLQREAQLAKSA
                     RLRTLLPLLRSTIMITIAIIAGLMILGEVGINIAPLLAGAGIIGVAIGFGSQKLVQDL
                     ITGIFLLLENAMQVGDVVSVGGLGGVVESLSVRTIRLRSEDGSIYIIPFSSVTTVTNM
                     TRDYSRAVIVASVAYKDDYDKVVAVLREIVQEMRAEDAWKTIILDDLEVWGLDHFGDS
                     AVNIKCRIMCTPFGRWSVLREFNRRMKTRFDEHGIEIPFPHRKLVMDVAPADIAAAIT
                     REAQDEKQRAAD"
     gene            2234..2944
                     /locus_tag="VHX39_18795"
     CDS             2234..2944
                     /locus_tag="VHX39_18795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008850515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe dioxygenase family protein"
                     /protein_id="HEX3993227.1"
                     /translation="MKSNEPLIERVRTTGFAFGAASTMRSLLTDEGSLSDWDAFAASW
                     NDLGPDTYMADGGRYRKRRHAVFAVNAEGVTRQPAQPHYQSRDYNTLNGGIERWFEPV
                     SEAVGAGHAITTILTICRSLFGMMSPAHGWHVEVHQFRIEARGGVEGRPTPEGMHRDG
                     VDYVLVLLVNRVNIASGMTSVHDLAGKELGHFTLTAPFDAALVDDARVMHGVTPVEPL
                     DPAEPGFRDVLVVTFRRA"
     gene            complement(2953..6471)
                     /locus_tag="VHX39_18800"
     CDS             complement(2953..6471)
                     /locus_tag="VHX39_18800"
                     /inference="COORDINATES: protein motif:HMM:NF024904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX3993228.1"
                     /translation="MRLKSLTLARYGNFDAECIHFDPRPGILNVLLAPNGGGKSVLRS
                     AFCDLLFGIGGQSPMGFRYGYPRMRITADALGPNGEALTLGRRKGQGNTLIDADGGTL
                     DPALLTRLLGPVDRNKLERLFALDTDRLRKGEADLLASNGELGPALVSGAGGTRDLRA
                     IRKSLEEARDSLAPTRRSAQRPFYLALDKFVDARKRENATLLSPDQWQKLQQELDAAI
                     RRRIDQNHIVEAESAEIARLERVRRVIPWLAAHDVAAAWLTDHPDAPVLDLGLTKRLA
                     DARSEIVIVEQRSRREHQRATELADRLGQVAVDDRLLLDAAEIERLVVASGAARKAAA
                     DLPGVEADVKARNAEVTACLRQLGSDLPTERAGEAIPSRTSITRTRRLVQAFTPLRQT
                     AQEAPELVNRRRQECDSIAQELAVLTTPNDVSDLDALVKDIRADGDPARRKRDAAQLC
                     NDALENLAASLARVPGWTTGAEALITLAPLSQDAYDRYYSDVTAQRAEAVACSEKLQS
                     AKESRDEARENIKYVTKSVSLPDDDALDRARTRRDRGWQIIYRRAFTAEPAAPHEEAA
                     FAESLPLPLAYERAVTTADTIADRRVEDAEIIASLQAAQVKLAHADKEFQEAEARHRL
                     AAEAQAAVERTWEQLCRGLNLGAMPTFREVQAFLAAREKVIDAQRIMKAAAAAETAID
                     ATHAGWADRLAAKLMVPPDSSLSSLLTAADKRLAAAQQAEKVRVGLDARRTAMTTALT
                     EAQTAQGKAEAALAEWRSDWAHAMKELGRTQDEDPHVMDDVLQVFADLEKAQKERPAQ
                     VERVAGMQRDNARFAEDTAALAGRVASDLTATDPFVLVAELRHRSQQAGERARQRDLL
                     QEQLLDATKSAELAERQLADRQAVLDSILLLIGAETIELAEQRLVLATERARHAASLA
                     EAEAKLREAGDLRPLAQLREEAAAVPSEEVPGRIGRAEQRRKEAQQDAQGAAVAASEL
                     EQQMRLKAAETGARDAAADQQAAVATIGRVLEEALVNHVAAEMLDRALAAMEQDGESE
                     LLRRISTLFKMLTDGAYSRVLTEIGDDNLTCLTLMQRDFPDERQSVQELSEGTRDQLY
                     LALRLAAVEAHAAVAPSLPFIGDDILQTFDDDRALAAMRVLGEISQRVQVILLTHHRH
                     VLDLAARLPADTVHICRLGATAPEAA"
     gene            complement(6474..7730)
                     /locus_tag="VHX39_18805"
     CDS             complement(6474..7730)
                     /locus_tag="VHX39_18805"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair exonuclease"
                     /protein_id="HEX3993229.1"
                     /translation="MASFRFLHCADLHIDSPLRGLEADPDAPADRIRSATRDAVVALV
                     DYAITSKVDFVLAAGDIYDGEWKDWRTGQFLVREVRRLSQANIPFIAIRGNHDAQSII
                     SHRLTLELPAREMSAETVETVILPELNVRIYGQSFKTRAVTDNLSKNYPPPDREWFNI
                     GMLHTNVDSRPGYENYAPSSLSDLRNHEYDYWALGHIHGRSILSEDPWIIYPGNLQGR
                     HVRETGPKGAMLVTVSEGKIAGRPEFIPFDTVRWDRIEVVVNAAEDEEAVIAIVRAKL
                     AQALAEAEGRLLAARILVSGATPAYAAINRDIGAFRDRVRAEAMTMTGAGGIWIESVA
                     VDITAPTASGVEPGILESVINDLDFSDLGASATRYCKDMLDRASGLRGALGEDHFLIN
                     TATRTDLSADLLKRARSLLLARLAEG"
BASE COUNT         1299 a         2479 c         2532 g         1567 t
ORIGIN      
        1 aaacgcgccg ccttcgcggc gaccctgaac gccatcgtca aggcacaacc ggccacccca
       61 accgcgactc cgcctaccac cccgcctacc gccaaacccg taaccacggt ggaaggcctg
      121 aagatcccgc tcgcccctga cagcctgggc gcccaggtcc tgctgtcggc ctccgacttc
      181 gtcaaccagc ttggcaaccg agcgaccgac gcgctggaca ccgtgcagag cctgccgctg
      241 ctgtacggct gggtcgtgat gatggcgacc aacgacaccg cgcgcggcct gctggcggat
      301 gtgatgtggc gtgtcgctct ggtggtggcc tgtgccgccg ccgttgaata cggccttcgg
      361 cttgccatgc ggcgcccgat ccgcggtctc gaatccctgg ccgctccacc gcgtcacgcc
      421 gaaccggaag agccgcccga agagccgccg gaagaacccg aaccggacga ggaggatgcg
      481 gtcgcccgtg ccgaggcagg ggagagtgag gcaccgccgc ccccacgccg ccgcccctct
      541 gcctggaatt tgctcaagcg cgttcccctg gtgatcgccc ggctcgtgct ggaattggtg
      601 cctgtcctcg gcatcgtcct ggtcgggcac ctgatcgccg gttcggccct gggtggccac
      661 gccggcagcc ggttgatcat cctggcggtg gtcgactcct acgccgcctg cgccgcgatg
      721 ctgtgcgtcg tgcgcatgtt gctgtccccc ggcacatccc gtctgcgcct gttccatctg
      781 cgcgacacca ccgccgccta tctgatgtat tggagccggc ggctcatcct gatcgccgtg
      841 ttcggctacg cgatcgggga ggtcgggcta ctgctgggcc tgtccgatat cgcgcatgag
      901 gcgctccaga agggcatcgg ccttatcctg catatctgcc tggcgatcat ggtgatccag
      961 aagcgccggg cgatacgtcg ccggctgcgc gcgccggcgg gggcgaccgg actgaccgcc
     1021 tcgctgcgca accgcttcgc caatgtctgg cactggatcg cgctgttctt cctgatcgcc
     1081 ggctggctgg tatgggcggt ggaggtccca cacggctacg cggccctgct gcattatttc
     1141 atcgtcaccg ccctggtgct gatcggtgcc aggcttgtgc tgctggtcct gctgggcgtg
     1201 gtcgaccggt tcatgcagcc ggtctcgcag ggcgagggct tctatcccgg catgtatgcc
     1261 aggctgggtg tctaccatcc ggtcgtgacc gtcgccctgc ggctgacggt ttacctgctg
     1321 tgcgtcctcg ggctgctgca actctacgga ctgaacacct tcctctggct ggtcgaaagc
     1381 gcgcttggcc tgcgtatcct ttcggccagc ggcaccttgc tggtcaccat cgtcctggcg
     1441 ttcgccgcct gggaggcgat caacggcggc gtccagcagc acctggaccg gctgcagcgc
     1501 gaggcgcaac tggccaaatc ggcccgcctg cgcacgctgc tgccgctgct gcgctccacg
     1561 atcatgatca ccatcgccat catcgccggc ctgatgatcc tgggtgaggt cggcatcaac
     1621 atcgctccgc tgctggcggg cgccggcatc atcggcgttg ccatcggctt cggctcgcag
     1681 aaactggtgc aggacctgat caccggcatc ttcctgctgc tggagaacgc catgcaggtc
     1741 ggcgacgtcg tcagcgttgg tggccttggc ggtgtggtgg agagcctgtc cgtccgcacg
     1801 atccggctgc ggtcggagga tggttcgata tacatcattc cattcagttc cgtcacgacc
     1861 gtgacgaaca tgacccggga ttacagccga gccgtcatcg tcgcctcggt cgcctacaag
     1921 gatgattatg acaaggtggt tgcggtgctg cgggagatcg tgcaggagat gcgggccgag
     1981 gacgcctgga agacgattat cctggacgat ctggaggtct gggggctgga tcatttcggc
     2041 gactcggcag tgaacatcaa atgtcgcatc atgtgcacgc cgttcggccg ctggtcggtt
     2101 ttgcgggagt tcaaccggcg gatgaagacg cgttttgacg aacatgggat tgaaatccca
     2161 ttcccgcatc gcaaattggt gatggacgtg gcgcccgccg acatcgccgc cgccattacc
     2221 cgggaggccc aagatgaaaa gcaacgagcc gctgattgag cgggtccgca ccacagggtt
     2281 cgcctttggc gcggcgtcga cgatgcgttc cctgctgacg gacgagggca gcctgtcgga
     2341 ttgggacgca ttcgcggcaa gctggaacga cctggggccg gacacctaca tggccgatgg
     2401 tggccgctac cgaaagcgcc gccacgcggt gttcgcggtc aacgcggagg gcgtcacccg
     2461 tcagcccgcc cagccgcatt atcagagccg tgactacaac acgctgaacg gcgggatcga
     2521 acgctggttc gagccagtga gcgaggcggt cggcgccgga cacgcgataa cgacgatcct
     2581 gacgatctgc cggagcctgt tcgggatgat gagcccggcc catggctggc acgtggaggt
     2641 ccatcaattt cgtatcgagg cgcgcggcgg cgtcgaaggc cggccgacgc cggagggcat
     2701 gcatcgcgac ggcgtcgatt acgtgctggt gctgctggtg aaccgggtga acatcgccag
     2761 tggcatgacc tcggtgcatg atctggccgg caaagagtta ggccatttca ccctgactgc
     2821 gccgttcgat gccgccctgg tggacgatgc tcgggtgatg cacggggtga cgccggtgga
     2881 accgctcgac ccggcggaac cggggttccg ggatgtgctg gtggtgacat tccggcgggc
     2941 ctgaatcagg catcaagctg cctcgggtgc ggtcgccccg aggcggcaga tatgcaccgt
     3001 atccgcgggc aggcgagccg ccaggtccag cacgtggcga tgatgcgtca gaagaatgac
     3061 ttgcacccgc tggctgatct caccgagtac ccgcatcgcg gccagcgcgc gatcgtcatc
     3121 gaaggtctgg aggatatcgt caccgataaa cggcaatgac ggggcgacgg ccgcatgcgc
     3181 ttcgacagcg gccaggcgca gcgcgagata gagttgatcg cgcgttccct ccgacagttc
     3241 ctgcaccgat tgtcgttcat caggaaaatc gcgctgcatc agtgtgaggc acgtcaggtt
     3301 gtcgtcgcct atctcggtca ggacgcgcga ataggcgcca tcagtcaaca tcttgaaaag
     3361 tgtgctgatg cgccgcagca actcggattc accatcctgt tccatggcgg cgagcgcgcg
     3421 atccagcatc tcggcggcaa cgtggttcac gagcgcctct tcaagcacgc gtccaattgt
     3481 ggcgacggcg gcctgctggt ctgccgcggc atccctcgcg ccagtttccg cggccttcag
     3541 cctcatctgc tgttccagtt cggaggcagc gacagccgcc ccttgggcat cctgctgggc
     3601 ttctttccgg cgctgctcgg cacgaccgat ccgtccgggc acctcttcgg atgggacggc
     3661 agcggcctcc tcgcggagtt gcgccaacgg ccgcagatcg ccggcctcgc ggagttttgc
     3721 ttccgcctcc gcaaggctcg cggcatgacg ggcacgttcg gtagccagaa cgagtcgctg
     3781 ttcggcaagc tcgatcgttt cggcaccaat gagaagcaag atcgagtcaa gcaccgcctg
     3841 gcgatccgcc aattggcgtt ccgccagttc cgcggatttt gtggcatcca gcaactgctc
     3901 ttgcaaaaga tcgcgctgcc tggcgcgttc cccggcctgc tgtgaccggt gacgaagctc
     3961 ggcaaccagg acaaacggat cggttgcggt cagatcggat gcaacacgtc cggccagggc
     4021 ggcggtatct tcggcgaagc gtgcattgtc tcgctgcatt ccggcgaccc gctcgacctg
     4081 cgcggggcgt tccttctgcg ctttctcgag gtcggcgaac acctgcaaca cgtcatccat
     4141 gacatgcgga tcttcgtcct gcgtccgacc aagctccttc attgcatgcg cccagtccga
     4201 ccgccattca gccaacgcag cttcggcctt gccctgcgcg gtctgggcct cggtgagcgc
     4261 cgttgtcatg gcggttcgcc tggcgtccag cccgacgcgg accttttcgg cctgttgagc
     4321 ggcggccagc cgtttgtcgg ccgcggtcag cagtgacgac agggaggaat ccggtggaac
     4381 catgagcttt gcggcgaggc ggtcagccca cccggcatgt gtggcgtcga tcgccgtttc
     4441 cgcagccgcc gcggctttca ttattcgttg tgcatcaata accttctcgc gtgccgccag
     4501 aaaagcctgc acctcccgga aggtcggcat tgcgccgagg ttgagccccc tgcagagttg
     4561 ttcccaggtc cgctctaccg ctgcttgcgc ttccgcggcc aggcgatgcc gagcctctgc
     4621 ctcttgaaac tccttgtctg catgggccag tttgacctga gccgcctgca ggctggcgat
     4681 gatttcggcg tcttccacac gccggtcagc gatagtgtcg gctgtcgtaa cggcacgctc
     4741 ataagcaaga ggcagcggca gcgattcggc aaaggctgct tcctcatgcg gagccgccgg
     4801 ctccgccgtg aaggcccggc ggtagataat ctgccatccg cgatcgcgcc tggtgcgggc
     4861 tcggtcaagg gcgtcgtcgt caggcagcga aactgatttc gttacatact ttatattttc
     4921 tctcgcctca tcacgcgatt ccttcgccga ctggagcttt tcggagcagg ccaccgcctc
     4981 cgcgcgttgc gcggttacgt cggaatagta acggtcgtag gcatcctgag agagtggcgc
     5041 cagtgtgatc aaggcttcgg ctccggtggt ccaccctggc acccgggcaa gtgatgcagc
     5101 aaggttttcc aacgcgtcgt tgcacagttg cgcggcgtct cgtttgcggc gtgcggggtc
     5161 gccatcggca cggatatcct tcaccagcgc atccaggtcg gatacatcgt tcggcgtcgt
     5221 caggactgca agttcttgcg cgatcgaatc gcattcctgc cgtcgcctat tgaccaattc
     5281 cggcgcttcc tgggccgttt ggcgcagcgg ggtgaaggct tgcaccaacc ggcgcgtgcg
     5341 ggtgatggat gtgcgggacg gaatcgcctc cccagcccgc tcggttggca gatctgagcc
     5401 gagttgtcgc aggcatgcgg ttacttcggc attccgcgct ttcacatccg cttcgacccc
     5461 cggcagatcg gcagcggcct tgcgtgcagc tccactcgcc acaaccaggc gttcgatttc
     5521 ggcagcgtcc aacaataaac ggtcatcgac tgcaacttga ccgagccggt ctgccaattc
     5581 agttgcacgt tggtgttcgc gccttgatcg ttgttcaaca atgacgatct ccgatcgggc
     5641 atctgccagg cgctttgtca gtccgaggtc gagtacaggc gcgtccgggt ggtccgtcag
     5701 ccaggcggca gccacatcgt gagcggcgag ccaggggatc acccggcgaa cgcgttcgag
     5761 acgggcgatc tccgcggatt cggcctcgac gatatggttc tgatcgatgc ggcgtcgaat
     5821 cgctgcgtcc agttcctgtt gcagcttttg ccactgatcc ggcgagagga gagtggcgtt
     5881 ctcgcgtttg cgggcgtcaa caaatttgtc cagcgcgaga tagaatggac gctgcgcgga
     5941 tcgacgcgtc ggcgccagcg aatcgcgcgc ctcctccaga cttttgcgga tggcgcgaag
     6001 gtctcgcgtt ccccctgcgc cggacaccag ggctgggccg agttctccgt tggaggcgag
     6061 caggtccgct tcacctttgc gcagccgatc ggtgtcgagc gcgaatagtc gttccagctt
     6121 gttccggtcc acggggccga ggagtcgtgt gagcagggca gggtcgagtg tcccgccgtc
     6181 ggcatctatc aaggtgtttc cttgaccttt gcggcggccg agcgtgagtg cctcgccatt
     6241 gggacccagc gcgtcggcgg tgatacgcat gcggggatag ccgtagcgaa agcccattgg
     6301 actttggccg ccaatgccga agagaagatc gcaaaatgcc gagcgcagta ctgatttgcc
     6361 gccgccgttg ggggcaagca gcacattcag gatgcccggt cgcggatcga aatgaataca
     6421 ttccgcgtca aaattgccgt aacgagcgag cgtcagggat ttcaggcgca tccttatccc
     6481 tccgccagac gtgctagcag aagactacgg gcacgcttca gcaaatcggc ggacagatcg
     6541 gtgcgcgtgg ctgtattgat aaggaaatga tcctcgccaa gcgcgcctcg aagcccgctt
     6601 gcgcgatcca gcatatcctt acagtatctg gttgcgctgg ccccgagatc ggagaaatcg
     6661 aggtcgttga tcaccgattc gagaatgcct ggttcgaccc cgctcgctgt cggtgccgta
     6721 atgtcgaccg caacgctttc gatccaaatt ccgcccgcgc cggtcatggt catggcttcg
     6781 gctcgcaccc tgtcgcgaaa cgctccgatg tcccgattta ttgctgcgta ggccggtgtg
     6841 gcgccggaca ccaggattcg cgcggcaagc agtcgccctt cggcttccgc gagggcttgg
     6901 gccagtttgg cgcgcacgat tgcaatgacg gcttcttcgt cttccgccgc gttgacgacc
     6961 acctcgatcc ggtcccagcg aacggtatcg aatggaatga attcgggacg tcctgctatc
     7021 ttgccttcag acaccgtgac gagcatggcg ccttttggcc ccgtttcccg aacatggcga
     7081 ccctggaggt tgccggggta gatgatccat ggatcttcag acaagatgga gcggccatga
     7141 atatggccca gcgcccagta gtcatattca tggttgcgta gatcggacag gctcgatggt
     7201 gcgtagttct cgtagccggg cctgctatcc acgttcgtgt gcagcattcc gatgttgaac
     7261 cattccctgt ccggcggcgg atagtttttt gagaggttgt cggttacagc ccgtgtcttg
     7321 aagctttgac cgtaaatccg aacgttcagc tccggcaaga ttaccgtttc cactgtctcc
     7381 gcgctcatct cccgggccgg caattcgagg gtgagccggt ggctgataat gctttgcgcg
     7441 tcatgattgc cgcggatggc gatgaacgga atgttggcct ggctgaggcg acgaacctca
     7501 cggaccagaa actgtccggt gcgccagtcc ttccactcgc catcatatat gtcgcccgcg
     7561 gcgaggacga aatcgacctt gctggtgatg gcgtagtcca cgagtgcgac gaccgcgtca
     7621 cgagtcgcac ttctgatgcg atccgcgggt gcgtccgggt cggcttccag gccacgaagc
     7681 gggctgtcga tgtggaggtc tgcgcagtgg aggaatcgga aggatgccat ggatatgaga
     7741 accgaagggg tgatttggcg taggtcaacg ggccggcttc agggcctcgg cattgatcgg
     7801 gtgacggagg cgtcggcgca tctacgtcgc catccaggca gggccgatcc gccgtgcctc
     7861 ggtgaccagc gcggcgg
//
LOCUS       DATAVD010000982         2627 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_841405, whole genome shotgun sequence.
ACCESSION   DATAVD010000982 DATAVD010000000
VERSION     DATAVD010000982.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2627
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_841405"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..520
                     /locus_tag="VHX39_18810"
     CDS             <1..520
                     /locus_tag="VHX39_18810"
                     /inference="COORDINATES: protein motif:HMM:NF014899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993230.1"
                     /translation="ERRGFDYPLLSFSVNCYGRRVNAAQGLRLPLAMRDKIRDLDPPS
                     PNPHRCMQVGAATARIMADSPWRVALMASSSWSHSFLTEKNWQLWPDVPADRRLYDAL
                     EAGDYATWHGYKTDQIEDSGQHEVLNWFCLLGAMEELGRKPDRSTFIENWAFVSPVVF
                     AHYYPGTPGHAE"
     gene            510..1796
                     /locus_tag="VHX39_18815"
     CDS             510..1796
                     /locus_tag="VHX39_18815"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX3993231.1"
                     /translation="MLSEERNRILTQTGSGTPMGELMRRYWQPIAAVSELAEKPIKPV
                     RLMGEDLTLFRDLSGNYGLVDRHCPHRRASLTNGYVEQCGVRCSYHGWLFAPDGTCIE
                     RPFEDVSISDEEARDPVAVKAYKVQAHAGLLWAYLGPNPAPLVPDWEPFGWKNGFVQI
                     VFAELPCNWFQCQENSIDPVHFEWQHSNWSVRLAGKSGPYVPRHLRLGFDEFEHGMVY
                     RRIREDTNEADELWTVGRVCLWPNALFTGSHFEWRVPIDDATTLSVTWMFARVPKERE
                     PYVQETIPYWHGPVKHPDGNWINSHIMNQDFIAWTGQGAIADRTKEHLGHSDRGIVMM
                     RKRFLDDIDAMRDGNDPKGLIRDPDHNRSVRLPTVSRDLLLNGLTMDHVLANPARSGT
                     ITPGSYVFQYGQPEHVRLAMQDALGREITLDGAVKP"
     gene            1816..>2627
                     /locus_tag="VHX39_18820"
     CDS             1816..>2627
                     /locus_tag="VHX39_18820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HEX3993232.1"
                     /translation="MRKFFGPMGSVTRLAVESEVLKSNILGDPTTRVVDIYIPAGHDG
                     HGLPLLVELVGITSSGLSQTNWQGFRENMPERLDRLIGEQRMQPVVVAFPDCFARIGG
                     NQYINSAATGPWEDFLTQEMLLAIEKRFGCGGPGRRGVYGKSSGGYGAIMHALRHSDV
                     WSAAACHSGDMGFELCYLPDMPATLRALAGSGNSIEQWWRKIEDATKRPDGIFTALNV
                     LAMAASYDPDPAEFLGMRLPVTFDTCEVIEDRWANWLRHDPVVAVETLGDNLR"
BASE COUNT          523 a          795 c          786 g          523 t
ORIGIN      
        1 cgaacgtcgc ggtttcgact atccgctgct gtcgtttagc gtgaattgtt acggtcgccg
       61 ggtcaacgcg gcgcaggggc tccggctgcc gttggcaatg cgtgataaaa tccgcgatct
      121 tgatccgccg tcgccaaacc cgcaccgctg catgcaggtt ggtgctgcaa ccgcccgtat
      181 catggccgat agtccgtggc gtgtcgcctt gatggcatcg tcgagttggt cccattcatt
      241 tctgaccgag aagaactggc aactctggcc cgacgtgccg gccgatcgcc gcctttatga
      301 cgcactcgaa gccggcgact acgcgacctg gcacggctac aaaaccgacc agatcgagga
      361 ttcaggtcaa catgaagtgc tgaactggtt ttgcctgttg ggcgccatgg aagaactcgg
      421 ccgcaagccc gatcgcagca cgttcatcga aaactgggct tttgtttcgc cggtggtgtt
      481 tgcccactac tatccaggga cccccggtca tgctgagtga agaacgcaat cggatcctga
      541 cgcaaaccgg atccggcacg ccgatgggcg agttgatgcg gcgctactgg caaccgatcg
      601 cggccgtgag cgaactggcg gagaagccga tcaaaccggt gcgcctgatg ggcgaggatc
      661 tgaccctttt ccgcgatctc tccggcaact acggactggt ggaccggcac tgtccacacc
      721 gccgcgccag cctgaccaac ggatatgttg aacaatgcgg tgtgcgctgc agttaccacg
      781 gatggctgtt tgctcccgac ggcacctgca ttgaacggcc atttgaggat gtctcaatct
      841 ctgacgagga ggctcgcgat cctgtcgcgg tcaaagccta taaagtgcag gcccatgccg
      901 ggttgctatg ggcgtatctt ggtcccaatc cggcgccatt ggtacccgac tgggagccgt
      961 ttggctggaa gaacggcttc gttcagattg tgttcgccga actgccgtgc aattggttcc
     1021 agtgccagga gaactccatc gacccggtgc atttcgaatg gcagcattcc aactggagtg
     1081 tgcgtctggc aggaaaatcc ggaccttacg tgccgcggca tcttcgcctg gggtttgatg
     1141 agttcgagca cggcatggtc tatcgccgca tccgagagga caccaacgaa gccgatgaac
     1201 tttggacagt cggccgcgtt tgcctttggc cgaatgcgct gttcaccggc tcgcatttcg
     1261 aatggcgcgt gccgatcgat gatgctacga cgttgagtgt cacctggatg ttcgcgcgcg
     1321 tacccaaaga acgcgaacca tacgtgcagg agaccatccc gtactggcac ggtccggtga
     1381 aacatcccga cggcaactgg atcaacagcc acatcatgaa tcaggacttc atcgcctgga
     1441 ccggccaggg agcgatcgcc gatcggacca aggaacacct cggccacagc gatcgcggca
     1501 tcgtcatgat gcgcaaacgc ttcctcgacg acatcgatgc aatgcgcgac ggcaacgacc
     1561 ccaagggact gatccgcgac cctgaccata accgctcggt acggctgcca acggtgagcc
     1621 gtgacctgct gctgaatggg ctgacgatgg atcatgtcct ggccaatccg gcgcgttcag
     1681 gcaccatcac gcccggcagc tatgtctttc aatatggcca accggagcat gtccgtctcg
     1741 ccatgcagga cgcgcttggt cgcgagatca ccctggacgg cgcggtaaag ccgtaaacca
     1801 ctgagaggaa cagcgatgcg taaattcttc ggaccgatgg gttcggtcac tcgcctcgcc
     1861 gtcgaaagcg aagtccttaa aagcaatatt ctcggcgacc cgacgacccg cgtggtcgac
     1921 atctacatcc ccgccggcca cgatggccac gggctgccgt tgctggtgga acttgtcggc
     1981 atcaccagca gcggcctgtc gcaaaccaat tggcaaggct ttcgtgagaa catgccggaa
     2041 cgcctcgatc gcctgatcgg cgaacagcgc atgcaaccgg tcgtcgttgc ctttccggat
     2101 tgtttcgccc ggatcggcgg caaccagtac atcaactcag ccgccaccgg accatgggaa
     2161 gatttcctca ctcaggagat gctgctcgcg atcgaaaaac gtttcggttg cggaggacca
     2221 ggacgtcggg gggtttatgg caagagttcc ggcggatatg gcgcgatcat gcatgcgctg
     2281 cgccattccg acgtctggtc ggccgcggcg tgtcactcgg gcgacatggg cttcgagctt
     2341 tgctatttgc ccgatatgcc ggccaccctg cgcgcgcttg ccggttcagg caattccatc
     2401 gagcaatggt ggcgcaagat cgaggacgca acgaaacgtc ccgacggtat ttttaccgcg
     2461 ctgaacgttc tggcaatggc ggccagctat gatccggatc cggccgagtt cctcggaatg
     2521 cgcctccctg tcacgttcga cacctgcgag gtgatcgagg accgctgggc caactggctg
     2581 cgccacgacc cggtggtcgc tgtcgagaca ttgggtgata acctccg
//
LOCUS       DATAVD010000983         9980 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1212372, whole genome shotgun sequence.
ACCESSION   DATAVD010000983 DATAVD010000000
VERSION     DATAVD010000983.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9980
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1212372"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..491)
                     /locus_tag="VHX39_18825"
     CDS             complement(<1..491)
                     /locus_tag="VHX39_18825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003626050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtB"
                     /protein_id="HEX3993233.1"
                     /translation="MLFGYSFGDLGSIMAMQGFAGLSLFSVFVLMALGLAIIFGQMGV
                     INMAHGEFMILGAYVTYMTSQFFTAYLPSLFSIYFFVAVVLAFCASGAMGMLVEWVLI
                     RHLYRRPLDTLLATWGLSLILQQVYRSVFGAREVGVNQPDWMMGAANMTDTIQIPING
                     MIV"
     gene            complement(521..1786)
                     /gene="urtA"
                     /locus_tag="VHX39_18830"
     CDS             complement(521..1786)
                     /gene="urtA"
                     /locus_tag="VHX39_18830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019088874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033219 - urea binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter substrate-binding protein"
                     /protein_id="HEX3993234.1"
                     /translation="MSDNEKNTPPVSAVRRRILQGMAALPAATMLPRPSYAAGPPTSQ
                     VNTTGLAVTDDTVTVGILHSITGTMAISETGSVEAEKLAIAQINESGGVLGRQIKIVQ
                     EDGASDWPTCAEKAKKLLVVDKCAAVFGCWTSASRKAVLPVFEQYNGMLYYPTFYEGL
                     EESKNVIYDGQEATQQILAGLNWVNRTKGSKTFYLLGSDYIWPRTSNKIARKHIEEHL
                     KGCKVVGEDYFPLGSTQFNSVINKMKLVKPDVIYAIIVGGSNVAFYKQLKAAGVNLNK
                     QTLLTISVTEDEILGIGGENIAGAFACMKYFQSLDNPNNKKFVPAFKKMWGEKSVIGD
                     VTQAAYLGPNLWKLTAEKAGSFDVNKIAAASPGVEFKGAPEGYVRIHENHHLWSKTRV
                     GKARLDGQYDVVYETPDLVEPNPFPKGYQ"
     gene            2068..5436
                     /locus_tag="VHX39_18835"
     CDS             2068..5436
                     /locus_tag="VHX39_18835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3993235.1"
                     /translation="MAIQQRIVRIRREYNQWVANQTLEDYALRFTAQSARKWSAARVA
                     NTALGGISFLALEAIGATVTMNYGFSNAVAAILLVGVLIFAAGVPISYYAARDGVDID
                     LLTRGAGFGYIGSTITSLIYASFTFIFFAIEATILASMLEVCLGVPPAIGYFICAVAV
                     IPLVTHGITFISRVQLWSQPLWLLLQLVPFIVVGVTVRDAFTHWTDYAGSAPGADGSF
                     QLLLFGAAASVVFSLIAQIGEQVDYLRFLPAPRSGQGRAGWWAAMLAGGPGWIVIGTL
                     KLLGGSFLACVAVASGLAPHVAAQPTVMYRMAFGYVVHSPGAALALTGCFVIVSQVKI
                     NITNAYAGSIAWSNFFSRLTHSHPGRVVWLIFNIAIALLLMELGIYQAIEHTLVVYSV
                     VAAAWVGALVADLVVNKPLGFSPAYIEFKRAHLYDINPVGTGSMLLAVVVAATAYWGA
                     FGVMAQALSPFVAFLCAFLAAPLIAWATDGRYYIARKPRAHWGKMASLRCVICENEFE
                     PEDMAYCPAYTGAICSLCCSLDARCHDSCKPSARLCQQVSVPLTALIPPPVRQALSGS
                     LARYFGTLALFTVVIGGTLLAIYSQTISGGLAERAAMTRAFWQAFLILIPVAGVLAWL
                     LVLAHESRRVAQEETRRQTALLMAEIRAHQRTDRQLQKAKDVAEAANLAKSRYVVGIS
                     HELRSPLNAILGYAQLLERDTAISAQRRDNIRIIRRSGEHLAGLIEGLLDISKIEAGR
                     IEIYRDEVRLPEFLKQLVNMFRLQAEAKGIAFSFIRPEWLPEVVYTDERRLRQIMINL
                     LSNAIKFTQQGSVRLRLRLRSEIAEFEITDTGIGIAAADLTRIFEPFERVEGARVPIT
                     PGIGLGLTITRLLTQVMGGELTVTSQPGQGSSFRVRLMLSEAKQALKPAPLESRVLGY
                     KGERLTVLVADDDPVHRGLLEDLLSPLGFVVFMAADGAECLALADACRPNLLLVDISM
                     PLLNGWEVARRLRENGFDQLVIIMISANPNELHRPPQPERHHDDVLAKPVSIPDLLNK
                     ISFLLQLEWLAQGAEPRAELAAPIRNTLGPVRTEELRQLGSIGYVRGIHARLDSLETD
                     SPEDAACIAQLRRLVADFQIDAFMEALGSESDSE"
     gene            5433..6347
                     /locus_tag="VHX39_18840"
     CDS             5433..6347
                     /locus_tag="VHX39_18840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3993236.1"
                     /translation="MMRPRDIVLVVDDSPATLGVLNEALEQAGYTVLIAQSGTTALTL
                     VERVTPDIVLMDALMPGLDGFETCRRMKQNPTLASVPIIFMTGLTETEHVIRGLDSGG
                     VDYVSKPVAPDEVIARIGVHLSNARLTRSAQIALDAAGRFLLAADREGRILWSTPQAT
                     RLIELASGASGITLPPVVTQWLRTCADNPLIARQASLTAAFHADGQHRLQVTYIGQVG
                     PDEQLLRLVAEQSGSDEILLRERLALTSREAEVLLWLSRGKSNRDIAEILSLSPRTIN
                     KHLEQTFEKLGVENRASATALAVRTLQG"
     gene            6542..7459
                     /locus_tag="VHX39_18845"
     CDS             6542..7459
                     /locus_tag="VHX39_18845"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3993237.1"
                     /translation="MEIRQLRYFIAVADGGNLSNAARQLNVSQPPVTRQIHQLEEEVG
                     QALFIRSTKGVELTPAGAAFLVEARKILAQTSLATERANAAARGRLGRIDIGYFGSVI
                     YTFLPGVVRRFRNMTPDAEVSLHQVPKKEQVEALRSGRLHIGFARYYPYEADITVESV
                     SRERLYFAVPSNTPSALRKTVALEDLRDERLILFPKDGRPSFADEIITMYSRFGGTPH
                     VTYFADDAPSALALTAANLGSTFVPGSVASIVWPGVVFIPVVTENIWLPIDCIYLKDA
                     TSPILMAFLDAIRQETASRQAGRQFADPI"
     gene            complement(7452..8441)
                     /locus_tag="VHX39_18850"
     CDS             complement(7452..8441)
                     /locus_tag="VHX39_18850"
                     /inference="COORDINATES: protein motif:HMM:NF025878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX3993238.1"
                     /translation="MDIVEPVQAIARGELAALRQCRLFVCDDIIEARDQIAKVLQPHR
                     LLPLRMVDPHPHHMDVIDIPGVRVSAVSFGEARIEVPPLADYHAVIFCLSGQARVRAG
                     GQEVDIGPRRAVTCGPGHPLEGHFSSDCEQLVLRIDRAAMQAHTGLRHVVLNPVIDLS
                     GPSTRPWLVHLRNLTDDPELLRMVRTDRRIATNFTSLLLGLLVNGHLHGDAPEPSRQR
                     AVPASVYRAEAFIEAHAADPITLEAIAAAAHTPVRTLLDGFRRFREISPMQHLRNVRL
                     NQARDRIMGSRSQSIAAIALECGFGNLGRFAQQYAERFGERPSETRAMAKRLI"
     gene            complement(8573..9823)
                     /locus_tag="VHX39_18855"
     CDS             complement(8573..9823)
                     /locus_tag="VHX39_18855"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3993239.1"
                     /translation="MAAGDDVVIIGAGQAGGRAAEALRRGGHTGSITIVGDELHPPYE
                     RPSLSKGFLHEPDLAKLVWVRPQAWYASNNVALLTGRRVTNIHRARRQIELEDGTAID
                     YQTIVIATGTRPRLLPVSGADHPAVRYLRTIEDSRELRKRIRPGGRVVVIGAGFIGLE
                     VAAMAKTLGGNVTVLEWGALPMGRAVPPKVGAFYAAFHRAKGVDLRLGARLQRIVERN
                     GFTAVEMENGELLPADVIVAGIGATPNVDLAENAGLVIDNGIVVDEYGRTSDPAIYAA
                     GDVTSHFNPLLGHSIRLESWQNAQNQAIAVARNVLGEARAYAEVPWFWTDQFELNLQI
                     AGLPKEGDDVIQRGSLGEGPAVMFHMRDDNLVAVIGIDSPKEVRFGKEIITMGGRIDR
                     AALTDPAVNLANVVRAMKQASKVT"
BASE COUNT         1857 a         2987 c         3152 g         1984 t
ORIGIN      
        1 atgacgatca tgccgttgat cgggatctgg atggtgtcgg tcatgttggc cgcacccatc
       61 atccagtcgg gctggttgac cccgacctcc cgagcgccaa aaaccgagcg gtaaacttgt
      121 tgcaggataa gactgaggcc ccaggtggcc agcagggtgt ccaatggtcg tcggtagagg
      181 tgccggatca gcacccattc caccagcatc cccatcgcgc cggacgcaca gaatgccagg
      241 acgacggcga cgaaaaagta aatgctgaac agcgacggca ggtaggcggt gaagaactgc
      301 gacgtcatgt aggtaacgta ggcgccgagg atcatgaact ccccgtgcgc catattgata
      361 acgcccatct ggccaaagat gatggccaga ccgagcgcca tgagaacgaa gacggagaac
      421 aggctcaggc cggcgaagcc ctgcatggcc atgatggagc cgagatcgcc aaacgaataa
      481 ccaaacagca tggactgctc tccgtcggtt atgatgcggc ttactggtag cccttcggga
      541 atggattggg ttcgaccagg tcgggcgttt cgtaaaccac gtcgtactgg ccatcgagcc
      601 tggccttgcc gacgcgggtc ttgctccaga ggtggtggtt ttcgtggatg cggacgtagc
      661 cttcgggggc gcccttgaat tccacgcccg gcgacgcggc ggcgatcttg ttgacgtcga
      721 aactaccggc tttctcggca gtcagtttcc acaggttcgg gccgagatag gcggcctggg
      781 tcacgtcgcc gatgacgctt ttttcacccc acatcttctt gaaggccggc acgaacttct
      841 tgttgttcgg attgtcgagc gattggaaat acttcatgca ggcgaatgcc ccggcgatgt
      901 tctcgccgcc gatgccaagg atttcgtcct cggtgaccga gatcgtcagc agcgtctgtt
      961 tgttgagatt gacgcccgct gccttgagct gcttgtagaa cgcgacgttg gacccgccga
     1021 cgatgatcgc gtagatcaca tcgggcttca ccagcttcat cttgttgatg acggaattga
     1081 actgcgtgct gcccagcggg aagtagtcct cgccgacgac cttgcagcct ttcaggtgct
     1141 cctcgatatg tttgcgggcg atcttgttgg atgtgcgggg ccagatgtag tcggaaccga
     1201 gcagatagaa cgtcttggaa cccttggtgc ggttcaccca attgagacct gcgaggatct
     1261 gctgcgtcgc ttcctggccg tcgtagatga cgttcttcga ctcttccagg ccctcgtaga
     1321 aggtggggta gtacagcatg ccgttatatt gctcgaacac cggcagcacg gccttgcggg
     1381 aagccgaggt ccagcagccg aataccgcgg cgcatttgtc caccaccagc agcttcttgg
     1441 ctttttcggc gcaggtcggc caatcgctgg cgccgtcttc ctggacgatc ttgatctggc
     1501 gaccgaggac gccgccggac tcattgatct gggcgatggc gagcttttcg gcctcgaccg
     1561 acccggtttc gctgatcgcc atggttccgg ttatggaatg caggatgccg acggtgaccg
     1621 tgtcatcggt gacggcgagg ccggtggtgt tgacctggga cgttggcggg ccggcggcat
     1681 agctgggccg cggcagcatg gtggcggcgg gcaatgcggc catgccctgc aatatacgtc
     1741 tgcgaacggc tgagaccggc ggcgtgtttt tttcgttatc cgacataaga cccccaaggg
     1801 aaaagcgagt ggggtgatcc tggttggtca tgctgcactg cggcaatacg ttaaatgacg
     1861 tatgccgtgt ggcataaaat acacttgacc ccaacgaacg gagcgggcca tgctggcttg
     1921 cccaggtgct gtattggcac gaactcgata caaatcccgg ggaatgcggc gtactttagt
     1981 ttgtgaagac gtctgtatgg acggatttga tacggatgcg ggttatccgg cgtgaggtgg
     2041 gccgggagcg agggaacaac acggtagatg gcgatacagc agcggatcgt gcggatccgg
     2101 cgcgaataca accagtgggt ggcgaaccag acgctggagg attacgcgct gcggttcacc
     2161 gcgcaaagtg cgcggaaatg gtccgccgcc cgcgtcgcca ataccgcgct gggtggcatt
     2221 tccttcctgg cgctggaggc aatcggcgcc accgtcacca tgaactacgg cttctccaac
     2281 gccgtcgccg cgatcttgct ggttggcgtg ctgatcttcg cggcgggcgt gccgatcagc
     2341 tattacgccg cgcgcgacgg tgttgacatc gacctgctga cccgcggcgc cggcttcggc
     2401 tatatcggct cgaccatcac gtcactgatc tatgcctcgt ttaccttcat cttctttgcc
     2461 atagaggcca ccatactggc ctcgatgctt gaggtgtgcc tgggcgtccc gccggcgatc
     2521 ggctacttca tatgtgccgt cgcggtaatc ccactggtca cccacggcat caccttcatc
     2581 agccgggtgc aactatggtc gcagccactg tggctgctgt tgcaactggt gccgttcatc
     2641 gttgtgggcg tgacggtgcg cgacgctttc acgcactgga cggactatgc cgggtccgcc
     2701 ccgggcgctg acggatcgtt tcaattgctg ctattcggcg cggccgcctc tgtggtgttt
     2761 tcgctgatcg cgcagatcgg cgagcaggtg gactatttgc gcttcctgcc ggcgccacgg
     2821 tcaggacagg ggcgcgccgg atggtgggcg gcgatgctgg cgggcggtcc ggggtggatc
     2881 gtgatcggca cgctgaagct gctgggcggg tcgttcctgg cctgcgtcgc ggtcgccagc
     2941 ggtctggcac cgcatgtcgc ggctcagcct acggtgatgt accggatggc attcggctac
     3001 gtggtgcatt cgccgggcgc ggcgctggcg ctgaccggct gtttcgtgat cgtttcgcag
     3061 gtcaagatca acatcaccaa tgcctatgcc ggatccattg cgtggtcgaa tttcttctcg
     3121 cggctgacgc acagccatcc tgggcgggtc gtctggctga tcttcaacat cgccatcgcc
     3181 ctgctgctga tggaactggg catctaccag gccatcgagc acaccctggt ggtgtattcc
     3241 gtggtcgccg cagcctgggt gggcgcgctg gtcgccgatc tggtggtcaa caagccgctg
     3301 gggttcagcc cggcctacat cgaattcaag cgggcacatc tttacgacat caatccggtc
     3361 ggcaccggtt ccatgctgct ggcggtcgtc gtcgcggcaa ccgcctattg gggggcgttc
     3421 ggcgtcatgg cgcaggcgct gtcgccgttc gtcgcgttcc tgtgcgcgtt cctcgccgcg
     3481 ccgctgatcg cctgggcgac tgacggacgc tattatatcg cccgcaagcc gcgcgcccac
     3541 tggggcaaaa tggcgtcgtt gcgttgtgtt atctgcgaga acgagttcga accggaggac
     3601 atggcctatt gtccagccta taccggggca atctgttcac tgtgctgttc cctggatgcc
     3661 cgttgccatg acagttgcaa gccgtcggcg cgcctgtgcc agcaggtttc ggtgccgttg
     3721 accgcgctga ttccgccgcc ggtccggcag gcgttgagcg gatccctggc gcgctatttc
     3781 ggcaccctgg cgctgttcac cgtcgtcatc ggcgggacgc tgctggcaat ttatagccag
     3841 accatcagtg gcgggttggc tgaacgggcg gccatgaccc gcgcgttctg gcaggcgttc
     3901 cttattctga tcccggtcgc cggcgtgctg gcctggctgc tggtgctggc gcacgaaagc
     3961 cggcgggtgg cgcaggagga aacccggcgg cagaccgcgc tgctgatggc ggaaatccga
     4021 gcgcaccagc gcaccgatcg gcagttgcag aaggccaagg acgtcgccga ggccgccaac
     4081 ctcgcgaaaa gccgttacgt cgtcggcatc agccatgagt tgcgcagccc gctgaacgcg
     4141 atcctgggtt atgcgcagtt gctggaacgc gataccgcga tcagcgcgca gcggcgcgac
     4201 aacatccgga tcatccggcg cagcggcgaa catcttgccg ggctgatcga agggttgctg
     4261 gatatctcca aaatcgaggc gggacggatc gaaatctacc gcgacgaagt ccggctgccg
     4321 gaatttctga aacaactggt caacatgttc cggctacagg ccgaggcgaa aggcatcgca
     4381 ttcagtttca tccgtcccga atggctgccg gaggtggttt acacagacga acgccggctg
     4441 cggcagatca tgatcaatct gctgtcgaac gcgatcaaat tcactcagca agggtctgtg
     4501 cgcctgcgcc ttcggttgcg gagcgaaatc gccgagttcg aaatcaccga cacagggatc
     4561 ggcatcgcgg cagccgatct gacgcgcatc ttcgaaccct tcgagcgggt cgaaggcgct
     4621 cgggtcccga ttacccccgg catcggcctg gggctgacga tcacccggct gctgacgcag
     4681 gtgatgggcg gcgaactaac ggtcaccagc cagccaggac agggcagtag cttccgggtg
     4741 cggctgatgc tttcggaagc gaagcaggcg ctgaaacccg ctccgctgga gagccgcgtg
     4801 ctgggttaca agggtgagcg gctgacggtc ctggtggccg acgacgatcc cgtgcatcgg
     4861 ggcttgctgg aagatttgct gtcgccgctt ggcttcgtcg tgttcatggc ggcggacggc
     4921 gcggagtgcc tggcactcgc cgatgcgtgc cggccgaacc tgctgctggt ggacatttcg
     4981 atgccgctac tgaatggctg ggaagtcgcc cggcggctgc gggagaacgg attcgaccaa
     5041 ctggtcatca tcatgatctc ggcgaatccc aacgagttgc atcggccgcc gcagccggaa
     5101 cgacaccatg atgacgttct ggccaagccg gtcagcattc ccgacctgct taacaagatc
     5161 agctttctgt tgcagttgga gtggctggcg caaggcgccg aaccgcgtgc ggagcttgcc
     5221 gcgccgatcc gcaacacgct gggtccggtt cggaccgagg aactgcgtca gcttggttcc
     5281 atcggatacg ttcggggaat ccacgcgcgc ctcgattcac tggaaaccga ttctccggaa
     5341 gatgccgcct gcatcgcgca actgcgccgc ctggttgcgg acttccaaat cgatgcgttc
     5401 atggaagccc tcggttctga atcggactcc gaatgatgcg gccccgcgac attgtgctgg
     5461 tggtggatga cagccccgcg acgcttggcg tgttgaatga ggcgttggaa caggcgggct
     5521 acaccgttct gattgcgcaa tcgggcacca cggcactgac attggtggag cgggtgacac
     5581 cggacatcgt tctgatggat gcgctgatgc ccgggctgga cggattcgag acctgccgcc
     5641 gaatgaaaca aaatccgacc ctggcctccg tgccgatcat tttcatgacc ggcttgacgg
     5701 aaaccgagca cgtgattcgt ggactggatt cggggggcgt ggattatgtt tcgaaaccgg
     5761 tcgcgccgga cgaggtgatc gctcggatcg gggtccactt atccaacgca cggctgacgc
     5821 gcagtgccca gatcgcgctg gatgccgccg ggcgcttcct gctcgccgcc gaccgggagg
     5881 gacgtatcct gtggtcaacg ccgcaggcca cgcggctgat cgagctggcc agcggcgcgt
     5941 cagggatcac tctgccgccc gtcgttacgc aatggttgcg gacctgcgcc gataatccgc
     6001 tgatcgcccg gcaggcgagc ctgaccgccg ctttccacgc ggacggacag catcgtctgc
     6061 aggtgaccta tatcggacaa gttggtccgg atgagcaact gttgcgtctg gtggcagaac
     6121 aaagcggcag cgacgaaatc ctactgcggg agcgtctggc gctgacgtcg cgcgaagcag
     6181 aggttctgct ctggctcagc aggggcaagt caaaccgcga tatcgcggaa attctgagcc
     6241 tgagtccgcg cacgatcaac aagcacctgg agcagacttt cgagaagctt ggtgtagaga
     6301 atcgggcctc ggccacggcg ttggccgtac gaaccctcca aggctgaacg cgtcgcgacc
     6361 cgctctctcg ccatcggcaa gaaccagaat ctgtctgtag agagcacgag ccagtcggtg
     6421 cgacttcaat cgcaaccatc gattgaattg cgtgcggcag cgaccatccg ttctaatcac
     6481 cgttggcaac taacgtgcca ggccataccg tatccgtatg ggcagagaag gaacgccgca
     6541 gatggaaatc aggcagcttc gctattttat tgcggtggcg gatggtggga atctcagcaa
     6601 tgccgccagg cagttgaatg tatcgcagcc tccggtcacc agacagatac accagcttga
     6661 ggaggaggtt ggccaagcct tattcatccg cagcaccaag ggtgtcgaac tgacaccggc
     6721 gggcgctgcg ttccttgtcg aagcgcgcaa aatcctggcc cagaccagcc tggcgaccga
     6781 gcgcgccaat gctgccgcgc gtggccggct cggtcggatt gacatcggct atttcggctc
     6841 cgtcatatat acgttcctgc ctggtgtcgt caggcgtttt cgcaacatga cacccgatgc
     6901 cgaggtctcg ctgcatcagg ttcccaaaaa ggaacaggtc gaagctctgc gcagcggcag
     6961 attgcatatc gggtttgccc gctactatcc atatgaagcc gatatcaccg tggaaagtgt
     7021 cagccgagag aggctgtatt ttgcggtacc gtcaaacacg ccgtcggcat tacgcaagac
     7081 cgtggcgctg gaggatctgc gcgacgaacg gctcattctg tttccgaaag acggccggcc
     7141 gagttttgcc gatgagatca tcacgatgta cagccggttc ggcgggaccc cgcatgtgac
     7201 ttacttcgcc gatgacgcac cgtcggcgct ggcactgacc gccgccaatc ttggctcgac
     7261 tttcgtgccc gggtcggtcg ccagtatcgt gtggccgggt gtcgtgttta tccccgtcgt
     7321 cacggaaaat atctggctgc cgatcgattg catctacctg aaggacgcca cctcccccat
     7381 actgatggcg tttcttgacg cgatcaggca ggaaaccgcc tctcgccagg cgggccgtca
     7441 gttcgcggat cctatataag ccgtttcgcc atggcacgtg tttccgaggg acgctcacca
     7501 aaacgttcgg catactgctg agcgaaacgg ccgagattgc caaagccgca ttccaatgcg
     7561 atcgcggcga tgctttgcga tcggctaccc attatccggt cccgcgcctg gttcaggcgg
     7621 acattgcgca aatgctgcat cgggctgatc tcacggaagc gccggaaccc atcgagaaga
     7681 gtccgcaccg gcgtgtgggc tgcggcggca atcgcctcca gcgtgatcgg atctgccgca
     7741 tgagcctcga tgaaggcctc cgcgcgatac acgctggcag ggaccgcccg ctgtcgcgac
     7801 ggttccggcg catcgccatg aagatggccg ttcaccagca aaccaagcaa caggctggtg
     7861 aaatttgtgg caatgcgacg gtcggttcgc accatgcgga gtaattccgg gtcgtccgtc
     7921 agattcctca gatggacaag ccagggccgc gttgaagggc ccgacagatc gatgaccgga
     7981 ttcaggacaa cgtggcggag gccggtatgg gcctgcatgg cggcgcggtc tatgcgcagc
     8041 acgagttgtt cgcagtcgct ggagaaatgg ccttccagcg ggtgcccagg gccgcaggtc
     8101 acggcacgcc ggggaccgat gtccacctcc tgcccaccag cccgcacgcg ggcttgtccg
     8161 gataggcaga agatgacggc gtggtagtcg gccaggggcg gcacttcgat ccgggcttcg
     8221 ccgaagctga cggcactgac tcgaacgccg ggaatatcga tgacatccat atgatgcgga
     8281 tgcggatcaa ccatgcgcag gggtaacaga cgatgtggct gcagtacctt ggcgatctga
     8341 tcccgtgcct cgatgatatc gtcgcacacg aaaagccggc actgccgcag tgccgccaat
     8401 tccccccggg cgatggcctg aaccggctcg acgatatcca tggagcgcga agacccttca
     8461 acaagcgcga atgcaccatg caaaatccgc gccggacagg gcaaaagata ccgagaaaca
     8521 cgatcacggc gctttaccaa atgtggcgat tgtcgaggcc ggctgcaaga cttcaggtga
     8581 ccttggaagc ctgtttcatc gcacgtacga cattggccag attgaccgcg gggtcggtca
     8641 gtgcggcgcg gtcgatcctg ccgcccatag tgatgatttc tttgccgaac cgcacctctt
     8701 tcgggctgtc gatgccgatg accgcgacga gattgtcatc gcgcatatga aacatcacgg
     8761 ctggtccctc accgaggcta ccgcgctgaa tgacatcgtc gccctccttc ggaaggccgg
     8821 cgatctgcaa attcagttcg aactgatcag tccagaacca tgggacctcg gcgtaggccc
     8881 tggcttcgcc cagaacgttc ctggcaaccg cgatcgcctg gttctgcgca ttctgccagg
     8941 attccaggcg gatgctgtga cccagcagcg ggttgaaatg acttgtgaca tcgccggccg
     9001 cataaatcgc cggatcgctg gtgcggccgt attcgtccac cacgataccg ttgtcgatca
     9061 cgagacctgc attttctgca aggtcgacat ttggggtggc gccaatgccg gcaacgatga
     9121 cgtctgccgg cagaagttcg ccattctcca tctcgaccgc cgtgaagccg ttccgttcga
     9181 cgatgcgctg caagcgggcg cccagacgca ggtcgacgcc tttcgcacga tggaacgcag
     9241 catagaaggc gcccaccttg ggcggcacgg cgcggcccat cggcagggcg ccccattcca
     9301 gcacggtgac gttgccgccg agcgtcttcg ccatggctgc aacttccaac ccgataaaac
     9361 ccgcgccgat caccacgaca cggccacccg gccggattcg tttccgaagt tcacgactgt
     9421 cttcgatggt gcgaagatag cggactgccg gatggtcggc gccactgacc ggcagcaggc
     9481 gcggccgcgt gcccgtggca atgacgatcg tctggtagtc gatcgccgtc ccgtcctcca
     9541 actcgatttg tcgcctagcg cggtggatgt tagtcacacg ccgtccggtc agcagcgcaa
     9601 cgttattgct tgcgtaccag gcttgcggcc ggacccagac gagttttgcc agatcgggtt
     9661 cgtgcaaaaa tccctttgac aatgacgggc gctcataagg cggatgtagt tcatcaccga
     9721 cgatggtaat ggaaccggta tgaccgcccc gccgtagcgc ctccgcggcc cgtccgcctg
     9781 cctgaccggc accgatgata acgacatcgt cccctgcggc catggcacta gatcggatac
     9841 gccagcagcg tctgcacgcg cgtggtgtcg taaatcgccc gctttgtctt gaagcgccaa
     9901 cccgcgtccg tctggacaat atggtcgtgg tatttccctg cctgatagac ggaggatacg
     9961 ccctcggaag acgtattgat
//
LOCUS       DATAVD010000984         3035 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2140868, whole genome shotgun sequence.
ACCESSION   DATAVD010000984 DATAVD010000000
VERSION     DATAVD010000984.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3035
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2140868"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(730..1908)
                     /locus_tag="VHX39_18860"
     CDS             complement(730..1908)
                     /locus_tag="VHX39_18860"
                     /inference="COORDINATES: protein motif:HMM:NF019404.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM43 family protein"
                     /protein_id="HEX3993240.1"
                     /translation="MSDSFDTGSGTFPGTDSFTETSTQGYGSRLGGSVMAALIGLILV
                     PVAVVLLYWNEGRAVDAIRALSRGEAAIVEVNAATVDPGSNGKLVHLSGMLQPGTPAQ
                     DPDFGVTGDGLVRLARSVEMYQWEEATSTQSQQNLGGSKTTEKTYTYKKAWSAQPVNS
                     GNFKVPGGHQNPSMPQRAATFDGTGVKIGAWQVDPSVLNKLTAFAPLPVQSAPPAGFQ
                     ASGDGFYRGQDPGQPAIGDVRVTFSAVQAQTVSVAAAQASGVLTAFRDANGYTIALAE
                     PGVASAAVLFHDEKKSEGTLTWILRCVGFVVMLIGFVCMTRPLTMLFAVVPFLESLVG
                     AGAFLVALTLAIPVTLLTIAVAWIVHRPLVGVVLLVGAVAAWYLLRQLLPKRAMPAHA
                     "
     gene            2120..2332
                     /locus_tag="VHX39_18865"
     CDS             2120..2332
                     /locus_tag="VHX39_18865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993241.1"
                     /translation="MSKPAGAPAKANHAESAVKPRLPRRRKPPSPRDPLPPDVPEVAP
                     ATASNPEDDSDLLPEHIRRMLEAAYT"
     gene            complement(2378..>3035)
                     /locus_tag="VHX39_18870"
     CDS             complement(2378..>3035)
                     /locus_tag="VHX39_18870"
                     /inference="COORDINATES: protein motif:HMM:NF014731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEX3993242.1"
                     /translation="AVVLSFDLALFASSSTKIPDGAWLPLLIAAIMMLIFATWSRGQT
                     AIAAALARDQPPVEPFMRETAGLPRVPGLAVYLSRQPGTVPHALRQMVLHWQVLHEFV
                     LLVTIETDYAPFVPSDQRLHFEEIAPGMGHAVLTFGYFDGPNLPAALRYLPDGWRHEM
                     DATSFVVGRMIAIPGAHPLMPRWRGVLFRMMLRVAGSACEYFGLPASRVIEIGIELEV
                     "
BASE COUNT          640 a         1027 c          834 g          534 t
ORIGIN      
        1 gttgacttat accgactggc caaacgatag accgatcgga ctgggttcga tcacgtcatg
       61 gccggccatc tcgatcggcg cctgccccaa atgatcgcca ggccaggccc aatgatgaca
      121 gttggagatg ggtacctgaa agtcaatcat tctgtcagtt gatatcggat tatttgcaac
      181 gtctggcagc gagagcgagc gcgaaaatct tcagtcagag atgatcccgg ccaggcaaat
      241 tattttagtg tccgtcccgg atcatcacgt tgacaaataa cggcaaattc aaacctgaaa
      301 agcttttccc ggaaagggtc gtgctcgggg actatctgcg ttcatcggcg ttcatcggcg
      361 gttgaaatct ttctttttcc ccaggggagc caagaaaaat agaaccgcgg atgaacgccg
      421 atgggttcgc gaggttcgaa acgttccgcc taaggactga gcgccgcgtc atcgataacc
      481 tgttcatctc acttggattg ttcgcggagg gactcttaca caaatgcaca cagatgagca
      541 cagatattct gttcgtacgt ctgtccacgt cgataccatg gaatggcaac cgcgccagcc
      601 agatcgtttc gaaaatccgt gcatgtctgt gtagatctgt gtgtatctgt gttaccaatc
      661 cttgcttttg tttcgcaata ccacatccac cctgacgttt acccccaggc accacaatgc
      721 ccgcgccgct taggcgtgcg ccggcatggc ccgcttcggc agcagttgcc gcagcagata
      781 ccaggccgcg accgctccaa ccagcaacac cactccgacc aacggccggt gcacgatcca
      841 cgccaccgcg atcgtcagca aagtcaccgg gatcgccaga gtcagcgcca ccaggaacgc
      901 tcctgcgccc accagcgatt ccaggaacgg caccacggcg aacaacatcg tcagcggccg
      961 tgtcatgcaa acgaatccga tcagcatgac gacaaacccg acacaacgaa gtatccaggt
     1021 cagcgttccc tccgacttct tctcatcgtg gaacaacacg gcagcactgg cgacacccgg
     1081 ctctgccaga gcaatcgtat agccgttcgc atcacgaaac gccgtcagca cgccggatgc
     1141 ctgcgccgcc gcgaccgaaa ccgtctgcgc ctgcaccgcc gagaacgtga cccgcacgtc
     1201 gccgatcgcc ggctgacctg ggtcctggcc tcgataaaac ccgtcccccg acgcctgaaa
     1261 acccgccgga ggtgccgatt gcaccggcaa cggcgcgaac gctgtcagct tgttgaggac
     1321 cgacggatcg acctgccagg ctccgatctt aaccccggtt ccgtcgaacg tcgccgcgcg
     1381 ttgcggcatt gaggggttct gatgcccgcc cggaactttg aaattgcccg aattgaccgg
     1441 ttgcgccgac cacgcctttt tgtaggtgta agtcttctcg gtggttttcg aaccgccgag
     1501 gttttgttgc gattgcgtgg aggtcgcttc ctcccactgg tacatctcga ccgaccgcgc
     1561 gaggcgcacc aacccgtcgc cggtgacccc gaaatcggga tcttgcgccg gcgtcccggg
     1621 ctgcagcatc cctgacagat gcaccagttt gccgttcgat cccgggtcca ccgtggcagc
     1681 gttgacctcg acaatcgccg cttccccgcg actgagcgca cggatcgcgt ccaccgcccg
     1741 gccttcattc caatacagca ggacaaccgc caccggcacc aggatcaggc cgatcagcgc
     1801 cgccatcacg ctgccgccaa gccgggagcc gtagccctgc gtcgaggttt cggtaaagct
     1861 atccgttccc gggaatgtcc cggaacccgt gtcgaatgag tcagacatga cgtttgcccc
     1921 atggctcgtg acatcgtctc agtatacgaa acccgccaga ttgtctcgga aatgtcggga
     1981 agaccgccag caaacgatga ccggtcaaac attaacggca ggttacgaga tgcagcttcg
     2041 acgccgcccc tgaatgccac tccgcgcggt catgccgccc ctggcgtcgc ccctctggca
     2101 tcactccggc agactgccta tgtcaaaacc ggccggcgcg ccggccaaag ccaatcatgc
     2161 ggagtccgca gtgaagcctc gtttaccccg ccggcgtaag ccgccgtcac cccgcgatcc
     2221 gttgccgccg gacgtcccgg aagtggcccc cgcgaccgcc tcgaacccag aggatgacag
     2281 cgacctgctc cccgaacaca tccgccggat gctggaagct gcctacacct gaccggcagg
     2341 cacccaaacc agtccagcca ctgaaccggc cggctcatca gacctccagc tcgatgccga
     2401 tttcgatgac ccggctggca ggcaacccaa aatactcgca ggcagacccg gccacccgaa
     2461 gcatcatgcg gaacaatacc ccgcgccatc gaggcatcag cgggtgcgct cccggtatcg
     2521 cgatcatccg gccgacgacg aaactggtgg cgtccatctc gtggcgccac ccatccggta
     2581 aataccgcaa cgcggcgggc aggttcggcc cgtcgaagta cccgaaggtc agcaccgcgt
     2641 gtcccatgcc gggcgcgatt tcctcaaagt gcaggcgctg atccgacggc acgaacggcg
     2701 cgtaatcggt ctcgatcgtc accagcagta cgaattcgtg cagcacctgc cagtgcagca
     2761 ccatctgacg caaggcgtgc ggaaccgtgc ccggctggcg cgaaagatag accgccaggc
     2821 ccggcaccct cggcagtccc gcggtttccc gcataaatgg ctcgaccggc ggctgatccc
     2881 gggccagcgc tgccgcaatc gctgtctggc cacgcgacca ggtggcgaag atcagcatca
     2941 tgatcgccgc gatcagcaag ggcagccacg cgccatccgg gattttggtg ctcgatgagg
     3001 cgaacagcgc cagatcgaag ctcagcacca ccgcg
//
LOCUS       DATAVD010000985         3348 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1212608, whole genome shotgun sequence.
ACCESSION   DATAVD010000985 DATAVD010000000
VERSION     DATAVD010000985.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3348
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1212608"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(739..1641)
                     /locus_tag="VHX39_18875"
                     /pseudo
     CDS             complement(739..1641)
                     /locus_tag="VHX39_18875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558189.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
     gene            1927..3315
                     /locus_tag="VHX39_18880"
     CDS             1927..3315
                     /locus_tag="VHX39_18880"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3993243.1"
                     /translation="MRAFARHDKEAKLLQNMGEIRAMVGVDMLGGATGAERQMLRRVI
                     FASVLGNGLEWFDFMSYGYFASIIAKVFFPAHSSLSLLLTYATFAVGFVVRPIGGIVL
                     GAYADKFGRRRSLALLIAMMAFGTLTIGVTPSYTTIGIAAPIIVVIGRVVQGFSIGGE
                     FANATALLVEYAPKNRRMTFGSFQLSSQGVGQVLATTIGLAVITTLPAATVHAWAWRL
                     PFLIGALVGPFGFYIRYRLVESPEYQELRTHVGTVAQAPLRNVLRGHAMQLLCGIGIV
                     IIGTALTYIWATYLPVYVVRQLHLPLWQGLMGVLAGSVIGIAACVLGGRLGDRFGPYR
                     MFFIFTVISALLSYPLFLYVLAAPSLARLIEVQLLALTVLALLHGSTPGMLAGLFPVE
                     VRTTGMAITYNLSVTVFGGFAPLTVSWLIAETGNKTMPAFYLMTAAALSLLMVGSTIA
                     TVQRRARIAILV"
BASE COUNT          553 a         1034 c         1063 g          698 t
ORIGIN      
        1 gcaatggcgt ccggttccgc ccggtaaaat tcgaccggtt tcccccttat ggggcatcca
       61 ggttagcggt gcgcattgca ccgggttgag caccgagcac aagtcaagac cgcatcgcta
      121 atcgccgatc ctggctatag gaggcgttcg ggagaacgca gtttgatgct gacgattggt
      181 gggacgaagc ggataaaaag ccttgggtgg acttctattt aaccccccac gattgggcgc
      241 tgccagaatg ggaactagtt tatctatccc tatatccctg cgtgcccccg caaccacttt
      301 taccgaactc aagaacaaac catgaccgga cgcagccaac gctgtggttt ccggcattgt
      361 tagtttgagc atcgcggcca aagcgcccgt taaaacgatt tccggctgat cgcgatccga
      421 acctgggcca atgtcgacac ggtcgaccag gtcgcgcagg cgttccagca cgccggcatt
      481 gtccgggctg gcggtgaggg cttcctgcag gccggcgacc ttagcccggt aaacctcagc
      541 caggttcggg tgcatggacg gcaagggggc ccggcggttg gccgcgcggt tttccagcgc
      601 cgccttctgc gcggtcagcg cttccagctt ctccttcatg tccggtgtcc gcagcccctc
      661 ggtgatagca tcgatgatgc ggtcgatctt gcgctggaca ttgctcagcg tcgtatcgtc
      721 atgggcctgc tgcgccccgg cctcggcggc gatccggttc gcgttctttt ccagcccgcg
      781 gtagcgaagc ttggtgaagc caaacacccg cttgatcacc ccgaagcagt gctcgacctt
      841 ggcccgcact tttgacttgg tgcggtttcg cgccttctcg gcctcatcca ccacgccgcg
      901 ctgccggtag cgccggttgg tgaagtcccg cgccttcggt gcgcgttcgc gcatcacggc
      961 gcgctgtccc cgatacgcct ggtcgcccca cacccgcgtc tcctcgccat gcagtagatc
     1021 gggcagcacc gtcgcgtccg ccacattggc cgccgtcgcc accaccgcgt ggatgacctt
     1081 gctccggctg tccacgccga tatgcgcctt catcccaaaa taccactgat tgcccttctt
     1141 ggtttggtgc atctccggat cccgtgcttg cgcggcgttc ttcgtcgagc tcggcgcgtg
     1201 aatgatgctg gcatcgacga tcgtacctgc cgaaagcctc aagccacgtt gctccagatg
     1261 ctcgtgcacg cattggaata ccgccgtccc cagaccgtgc cgttccagca aatggcggaa
     1321 cttgcagagc gtggtctcgt ccggcaccgg ctcctggccc aggtcgatgc ccacgaactg
     1381 acgcattgtg agcgagtcat aaactgcctc ctccgccccc gggtccgaca ggtcgaaccc
     1441 ctgctgcagg aaataaatgc gcaacatccg ctccaggcca accggcgcac ggcccttgcc
     1501 ggccttcgga tagacaggct caatcagagc gcacaactcg cgccaaggga cgacacggtt
     1561 catctcatcc agaaatgcgg cccgccgcgt cagcttgcgg taacgctcaa acccggccgt
     1621 tgccaatgtc acttgccgca tcgttgccgc cccctgctga ccacaaggaa aagtctatat
     1681 gatgttccag cggcagggcg agaggaactt aatcagaggt tcccgagccg ctcccggaca
     1741 gcccgctcga ggtcggggcg ctgggcgaac aggcgggcgg catggatggc cgcgcggttg
     1801 caagggcccg cagctcgggg accgcgaagg ccggggagcc cataaagacg aggcggaggt
     1861 tggagagggg agttgggcgc gatgctcatg gagggttggc atagcgcttg cgtattcgag
     1921 accggaatgc gggcatttgc acgccatgac aaggaggcta agctcttgca aaacatggga
     1981 gaaatacggg cgatggtagg cgtggacatg cttggtggcg cgaccggtgc ggagcggcag
     2041 atgctccggc gggtgatctt tgcctctgtc ttaggcaacg ggctcgaatg gttcgatttc
     2101 atgtcctacg gatatttcgc gagcatcatc gcgaaggtgt tcttccctgc gcacagttcc
     2161 ctgtcgctgc tgctgaccta tgcgaccttc gcggtggggt tcgtggtacg gccgatcgga
     2221 ggcatcgtgc tcggcgccta cgcggataag ttcggccggc ggagatcgct cgccctgctg
     2281 atcgcgatga tggcgttcgg tacgctgacg atcggcgtga cgccttctta tacgacgatc
     2341 ggcatcgcgg caccgattat cgtggtgatc gggagagtgg tgcagggatt ctcgatcggc
     2401 ggcgagttcg ccaatgcgac agcgctgctg gtggagtacg cgccgaaaaa ccggcgcatg
     2461 accttcggca gttttcagct gtcgtcgcag ggtgtggggc aggtgctggc gaccaccatc
     2521 ggccttgcag tgatcactac gctgccggca gccaccgtgc acgcctgggc gtggcggctg
     2581 ccgttcctga ttggcgcgct ggtcgggccg ttcggcttct acatccgcta tcggctcgtg
     2641 gaatcgcccg agtatcagga gttgcggacg catgtgggca cggtggcgca ggcgccgtta
     2701 cgcaatgtgc tgcgcggcca cgccatgcag ttgctctgcg gcatcggcat cgtgatcatc
     2761 ggcaccgcgc tcacctatat ctgggccacc tatctgccgg tctatgttgt gcgccagctc
     2821 catctgccgc tgtggcaggg actgatgggt gtgctggcgg gttcggtgat cgggatcgcc
     2881 gcctgcgttc tgggcggccg gcttggcgat cgtttcggtc cctatcggat gttcttcatc
     2941 ttcacggtga tctcggcgct gttgtcctat ccgctgttcc tctatgttct ggcggcgccc
     3001 agcctcgccc ggctgatcga ggtacagctc ctggcgctga ctgtccttgc gctgctgcac
     3061 gggtcgacgc cgggcatgct cgcgggactg tttccggtgg aagtgcgcac gaccgggatg
     3121 gcgatcacct acaatctttc ggtgaccgtg ttcggcggct tcgcgccgct caccgtgagc
     3181 tggttgatcg ccgagacggg caataagacg atgccggcgt tctacctgat gacggcggcg
     3241 gcgctgtcgc tgctgatggt cggtagcacc atcgccactg tacaacggcg cgccaggatc
     3301 gcgattttag tctaggtttt gacttgggat ttcatgaaag gaacggga
//
LOCUS       DATAVD010000986         4649 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_653298, whole genome shotgun sequence.
ACCESSION   DATAVD010000986 DATAVD010000000
VERSION     DATAVD010000986.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4649
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_653298"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..498
                     /locus_tag="VHX39_18885"
     CDS             <1..498
                     /locus_tag="VHX39_18885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993244.1"
                     /translation="PALGSGAVDAAVVLEPFLSEALQMGVARQLNDLVTASGGTATEA
                     STSVPLVYSETFARDHAAAQGFMDAYLRGVRLYNDAFERGIDKEKIIGILAARAKLNA
                     GVIRNGFPAGLDPNGKVSVRFLQQCQDFFIQQHYLQAPIDLKRLVDTSFADSTVARLG
                     EYKLG"
     gene            495..1304
                     /locus_tag="VHX39_18890"
     CDS             495..1304
                     /locus_tag="VHX39_18890"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3993245.1"
                     /translation="MTEQRQVALQVAGLRKVFITRQSAVVEAIGGVSLNIGVGEVVAI
                     LGPSGCGKSSLLRILAGLDEDYEGEIDWSLANPRGLPDRLLAATVFQADSTMPWMTVE
                     KNLRIGLSGLKLAASVAEERITRNLALVGLAAFRRAYPHELSGGMRQRVSIARALATD
                     PLLLLMDEPLAALDAQTRIVMQQELIAIWQRTNSTVVYVTHDIAEAVTLADTVVVMTA
                     RPGRIKAVRPVPFGRERDVIALRREPAFRELEAALWTMVTEEVGDSLAADA"
     gene            1279..2115
                     /locus_tag="VHX39_18895"
     CDS             1279..2115
                     /locus_tag="VHX39_18895"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3993246.1"
                     /translation="MTALPPMHDSAEAMARRSLRRRRNQTVVRYALGVACPLVLLAIW
                     QLLDLTGVIDPRFFPPPTRVFADGIGILGNPEQRGELLADTLITLRRLGIGYVLGASA
                     GMLMGLAMALYAPMRYAFSPVVYGTFPMPKIAIFPLLIALFGIGEGSKTALVIMGVFY
                     MTCINTLSGVLYANPIHRDVIRAFRIPRVTGWLHVVLPSAMPAIVTGLKLGLGQALIL
                     VVSAEFVSSDDGIGHYIWDSWQVLAIPRMFVGLAVVTGIGGIAVLLGSLAERRLVPWA
                     SH"
     gene            2129..3262
                     /locus_tag="VHX39_18900"
     CDS             2129..3262
                     /locus_tag="VHX39_18900"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX3993247.1"
                     /translation="MTKLSVAIVGAGIGGLAAAACLRRIGIDVTIYEQAQRFARVGAG
                     IQQSPNAVRVLRRLGLEPQLRDIAFQPAAALNRQSDTGELLWERAMGAASEERYGAPY
                     LVLHRGDLHAVLASAVPDAVIQRGRKLVGLEQHGGSVRMDFADGSSAEANVVIGADGV
                     HSVVRESLFGAERPAFTGRVAYRTVFPAGLLRGAGIDDQSKWWGPDRHIVIYYVNPQR
                     SEVYFVTSTPEPDFTQESWSTTGDMAVLRDAYRDFHPTVRSVLDAAPSAHKWALVVRD
                     PLPRWTEGNIALLGDACHPMTPYMAQGAGTSIEDAAVLSRCLDGVDPDGVAAALRRYE
                     ATRKPRTSEIQALSRANDMNRFKAANELVYGYDAWTTSLAEVG"
     gene            complement(3362..4561)
                     /locus_tag="VHX39_18905"
     CDS             complement(3362..4561)
                     /locus_tag="VHX39_18905"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3993248.1"
                     /translation="MPILTRRRALALAGTTLATPAIAQTKQAPGVTDTELLIGQTMPY
                     SGPASSYAPIGKVEVAYVDMINSQGGINGRKIKLLSLDDGYSPPKTVEQTRKLVEEEG
                     VACIFQQLGTPTSVSTRKYLNIKKVPQIFVASGATLFDDPKAYPWTTGWQVSYQIEGR
                     VYARYILKSKPDAKIAMLYQNDDSGRDFMKGLKDGLGSKIGQLVATSSYETTDPTVDS
                     QVVQLQASGADALFVAGIPKFNAMALRKVRDLKWDPLYVIATVGSSVSSGLAPAGLDK
                     AVGLVTGAYMKDPSDPQWKDDPTYKDWLAFMQKYMPGADLGDINNVYGYCAAQTGAQV
                     FKQCGQDMSRENIMRQAASLDIQLPMFQAGIRFHTTATDYLAIKRMRLQRFNGKAWVP
                     FGDPIDA"
BASE COUNT          750 a         1341 c         1598 g          960 t
ORIGIN      
        1 cccgcgctgg gcagcggcgc ggtcgatgcg gcggtggtgc tggaaccgtt tctttcggag
       61 gcgttgcaga tgggggtcgc ccggcaactg aatgatctgg ttaccgcgtc tggcggcacc
      121 gcgaccgagg ccagcaccag cgtgcccttg gtctacagcg aaacgttcgc ccgcgaccac
      181 gccgccgcgc aagggttcat ggatgcctat ctgcgcggcg ttcggctgta caacgacgct
      241 tttgagcgtg gcatcgacaa ggaaaaaatc atcggtatcc tggctgctcg ggccaagctg
      301 aacgctggcg tgattcgcaa cggatttccg gccgggcttg acccgaacgg caaggtcagc
      361 gtgcggttcc tgcaacaatg ccaggatttc ttcattcagc agcattattt gcaggccccg
      421 atcgacctca agcgattggt cgatacttca ttcgccgaca gtacagtcgc tcgtttgggg
      481 gaatacaagc tcggatgacg gagcagcgac aagtagcgct tcaggtcgcc ggcctgcgga
      541 aggtcttcat tacccgtcag agcgcggtgg tggaggcgat cggcggcgtg tcgctgaaca
      601 tcggtgtcgg tgaagtcgtt gcgatcctgg gacccagcgg ctgcggcaaa tccagtttgc
      661 tgcggatcct ggcggggctg gacgaggact atgagggtga aatcgattgg tcgctggcca
      721 atcctcgggg tttgcctgat cggttgctgg ccgcgacggt ttttcaggcg gattcgacga
      781 tgccgtggat gacagtcgag aagaacctcc gtatcggtct gtcagggttg aagctggcgg
      841 cttcggtggc cgaggaacgt atcactcgca accttgccct ggttggtctg gcggcgttcc
      901 ggcgggccta tccgcatgaa ttgtcgggcg gcatgcggca acgggtctcg atcgcccgag
      961 cgctggcgac cgatccgctg ttgctgctga tggatgagcc gttggcggcg ttggatgcac
     1021 agacccggat tgtcatgcag caggaactga ttgcgatttg gcagcggacg aactcgaccg
     1081 tcgtctatgt gacgcacgac atcgccgagg cggtgacact tgccgatacc gttgtggtga
     1141 tgaccgcccg gcccgggcgg atcaaggcgg tgcgtccggt gccgttcggg cgggagcggg
     1201 atgtgatcgc gctgcgccgc gaaccggcgt tccgtgaatt ggaagccgcg ttatggacca
     1261 tggtgacgga ggaggttggt gacagccttg ccgccgatgc atgattccgc ggaagcaatg
     1321 gctcggcgca gcctgcgccg gcggcgcaat cagaccgtcg tccgctatgc gctgggtgtg
     1381 gcgtgcccgc ttgtgctgct ggcgatatgg cagttgctgg acctgacagg cgtgatcgat
     1441 ccgcgtttct tcccgccgcc gacacgagtt ttcgccgacg ggataggcat cctcgggaat
     1501 ccggaacagc gtggggaatt gctggccgat acgctgatca cgctgcgccg gcttgggatc
     1561 ggctatgtgc tgggggcgtc ggccggcatg ttgatgggcc tggcgatggc tctgtatgcc
     1621 ccgatgcgtt acgcgttcag tccggtggtc tacggcacgt tcccgatgcc caagatcgcg
     1681 atctttccgc tgctgatcgc cctgttcggc attggtgagg gcagcaagac ggcgctggtc
     1741 atcatgggcg tgttctacat gacctgcatc aacacactca gcggcgtgct gtatgccaat
     1801 ccgattcatc gggatgtgat cagggctttt cggattccac gggtgacggg gtggttgcat
     1861 gtggtgctgc cgtcggccat gccggcgatc gtcacggggc tgaaacttgg gctgggccag
     1921 gcgctgatcc tggtggtgtc ggcggaattc gtgtcgtccg acgacggtat cggccattac
     1981 atctgggatt cctggcaggt gctggcgatc ccgcgcatgt tcgttgggct ggcggtggtg
     2041 accggtatcg gcggcatcgc ggtgttgctg ggttcgctgg cggaacgtcg cctggtgccg
     2101 tgggccagcc attgaggggg aaccatccat gaccaaacta tccgtcgcga tcgtcggtgc
     2161 cggcatcggc ggccttgccg ccgcggcgtg tctgcggcgc attggcatcg acgtcacgat
     2221 ctatgagcag gcgcaacggt ttgcccgtgt cggcgccggc atccagcaaa gccccaacgc
     2281 cgtgcgggtg ctgcgccgcc tcgggttgga accgcaactg cgtgatatcg cgttccagcc
     2341 ggccgccgca ttgaatcgcc agtccgatac gggggaactg ctgtgggagc gggccatggg
     2401 cgctgccagt gaggaacgct acggtgctcc atatctggtg ttgcaccggg gtgatctgca
     2461 tgccgtcctg gcctccgccg tgccggatgc ggtcatccag cgtggtcgca agttggttgg
     2521 cctggaacaa cacgggggtt cggtgcggat ggatttcgcc gacggcagca gcgcggaggc
     2581 taatgtggtg atcggtgccg atggggttca ttccgtggtg cgggagtctc ttttcggcgc
     2641 ggaacggccg gcatttaccg gacgtgtcgc ctatcggacc gtgttcccgg cggggttgct
     2701 gcggggggcc gggatcgacg atcagtccaa gtggtggggg ccggaccggc acatcgtgat
     2761 ctattacgtc aatccgcaac gatcggaggt ctacttcgtc accagcacgc cggagccgga
     2821 tttcactcag gaatcctggt ctaccaccgg ggacatggcg gtgctgcggg atgcctaccg
     2881 ggatttccac ccgacggtcc gttcggtgct ggacgcggcg ccgtccgcgc ataaatgggc
     2941 cctggtggtg cgcgatccgc tgcctcggtg gaccgagggc aacatcgcgc tgctgggcga
     3001 cgcctgccac ccgatgacgc cctatatggc gcagggcgcc ggcacctcga tcgaggacgc
     3061 ggcggtgctg tcgcgatgcc tggacggcgt cgatccggac ggggtcgcgg cggccctgcg
     3121 acgttatgag gcaacgcgga aaccgcgcac ctcggagatc caggcgctgt cgcgggccaa
     3181 cgatatgaac cgcttcaagg cggccaatga gttggtctac ggctacgacg cctggaccac
     3241 gtccctggcg gaggtgggct aggcgtcgat cggaagtaat ccaatcgtct ggcgcgttct
     3301 ggcctctcgc gtcatggcgg gcaaccgtgc tcaccctgag gcgattattc cgcctcaaaa
     3361 cctaagcgtc gatcggatcc ccaaacggca cccacgcctt gccgttgaac cgttgcagcc
     3421 gcatccgctt gatggccagg tagtcggtcg cggtggtatg gaagcggatg ccggcctgga
     3481 acatcggcaa ctggatgtcc aggctggccg cctgccgcat gatgttctca cgcgacatat
     3541 cctggccgca ttgcttgaac acctgggcgc cggtctgggc ggcgcagtag ccgtagacgt
     3601 tattgatgtc gcccaaatcc gcgcccggca tgtatttctg catgaaggcc agccagtcct
     3661 tgtatgtcgg gtcgtccttc cactgcggat cggacggatc tttcatgtag gcaccggtca
     3721 ccaggccgac cgccttgtcc agaccggccg gggccaggcc ggatgagacc gacgagccga
     3781 ccgttgcgat cacgtagagc gggtcccatt tcaggtcgcg gacttttcgt aatgccatgg
     3841 cattgaattt cgggattcca gccacgaaca gtgcatcggc gccggacgcc tgcaactgca
     3901 cgacctgcga gtcgaccgtc gggtcggttg tttcataact cgacgtcgcg acaagttgcc
     3961 cgatcttgct gcccagtccg tccttgagac ctttcataaa atcgcggccc gaatcgtcgt
     4021 tctgatacag catcgcaatc ttggcgtcgg gtttggactt caggatgtag cgggcataga
     4081 cgcgtccctc gatctgataa ctgacctgcc agccggtggt ccagggatag gctttcgggt
     4141 cgtcgaacag cgtcgcaccc gaggcgacga atatctgcgg caccttcttg atgttcaggt
     4201 atttccgggt cgacacgctg gttggcgtcc caagttgctg gaagatacag gcgacgcctt
     4261 cttcctcaac aagcttgcgg gtctgctcca cggtcttcgg cgggctgtag ccgtcatcca
     4321 gcgacaaaag cttgatcttg cggccgttga tgccgccctg gctgttgatc atgtcgacat
     4381 aggcgacctc gaccttgccg atgggggcgt agctggaagc ggggccggaa tacggcatgg
     4441 tctggccaat cagcagttcg gtgtcggtga cgccgggggc ttgcttggtc tgggcgatgg
     4501 cgggggtcgc gagcgtggtg ccggccagcg ccaaagcgcg gcggcgggtc agtataggca
     4561 tcggtgttca ggcctctcgt tgatagcggt tcatacggat gacgagcaga tcacgcagtt
     4621 tcgggcgcat gcgtgcggtc caggtggtt
//
LOCUS       DATAVD010000987         1580 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1023951, whole genome shotgun sequence.
ACCESSION   DATAVD010000987 DATAVD010000000
VERSION     DATAVD010000987.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1023951"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..290
                     /locus_tag="VHX39_18910"
     CDS             <1..290
                     /locus_tag="VHX39_18910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993249.1"
                     /translation="MQFAMWSDAVENAGSFYPPDVIKSYEAGRKIQSTVGEVYFRAAD
                     HQLVRPVIIVRGKKPGEMKNKEDFWDVVEVVPGAPLMQAPDAFGCQLGDYT"
     gene            456..1331
                     /locus_tag="VHX39_18915"
     CDS             456..1331
                     /locus_tag="VHX39_18915"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3993250.1"
                     /translation="MITWPNFVSQLFNGLALGALLALISSGLTIIYGTLGVLNLAHGA
                     MFMLGGYAGYVAFQATGSFIVAVIAGSLFLVLVGVVMERLIIRHFYNRPHADQLLVTF
                     GLSICFVEIVRFFFSSLSKTVPSPPLFSGITSLGFLFYPTYRLAVVGIVAVALLGLYL
                     VLYRTRIGMIVRAGIEDSTMVDSLGIDVYRVFMIVFGIGAMAAGFAGIVNAPVVSLTP
                     DMGDAILVETFVVVVIGGVGSFPGAILGGLIAGEILSLTSMVNPAYSSVMLFAVMTLV
                     LVLRPQGLLGTRSRE"
     gene            1345..>1580
                     /locus_tag="VHX39_18920"
     CDS             1345..>1580
                     /locus_tag="VHX39_18920"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993251.1"
                     /translation="MWRHRTLPTEALTAIGLIATPFVLPHLGFAPDTVNQILIWGLFG
                     IGFDILFGYTGLLSFGQSAFYGTGGFVAAYLLVVA"
BASE COUNT          234 a          477 c          482 g          387 t
ORIGIN      
        1 acatgcaatt cgccatgtgg tcggacgccg ttgaaaatgc tggcagcttc tatccgcccg
       61 atgtcatcaa atcctatgag gccggccgca agatccagtc gaccgtcggc gaggtctatt
      121 tccgtgccgc cgaccatcag ctggtacgcc cggtgatcat cgtgcgcggc aaaaagccgg
      181 gcgagatgaa aaacaaggaa gatttctggg atgtcgtcga agtcgtcccg ggggcgccgt
      241 tgatgcaggc tccagacgct ttcggttgcc agctgggcga ttatacttaa gactgacgtt
      301 gcctcggtgt cgcaggcagc ttctcgcctg cgacgcgcgc cctccactcc cgaccccgca
      361 aggggcaggg atgggagggg gccttgatgc ggcatcgctt ccagttctcc agcccgccgc
      421 tccctgccca cttggcgcaa tgatcacttg gcgcaatgat cacttggccc aatttcgttt
      481 cgcagctctt taacggcttg gcgctcggcg cgcttttggc gctgatcagc tcgggcctca
      541 ccattattta tggcacgctc ggggtgctca acctggcgca cggcgccatg ttcatgctcg
      601 gcggctatgc cggttacgtt gcgtttcagg cgaccgggtc gttcatcgtg gcggtgattg
      661 ccggctcgct gtttctggtc ttggtcggcg tggtgatgga acgtctgatc atccggcact
      721 tctacaaccg gccgcacgcg gatcagctgc tcgtcacgtt cgggcttagc atctgtttcg
      781 tcgaaattgt ccggttcttt ttcagcagct tgtccaagac ggtgccgtcg ccgccgttgt
      841 tctccggaat cacgtcgctc ggtttcctgt tctatccgac ctaccgatta gccgtggtcg
      901 gcatcgtcgc ggtggcattg cttgggctgt atctggtgct ctatcgcacc cgtatcggca
      961 tgatcgtgcg cgccggcatc gaggattcca ccatggtgga ttcgctcggc atcgacgtct
     1021 atcgcgtttt catgatcgta ttcggcatcg gcgcgatggc ggcgggcttt gccggaattg
     1081 tcaacgctcc ggtggtttca ttgacgcccg acatgggcga cgccatcctg gtcgagacat
     1141 tcgtcgtcgt cgtgatcggc ggcgtcggtt cgttccccgg cgccatcctc ggcggattga
     1201 ttgccggcga gatactcagc ctgacctcca tggtgaatcc cgcctactcg agcgtcatgc
     1261 tgttcgccgt gatgacactt gtgctggtat tgcggccgca agggctgctc ggcacacgga
     1321 gccgcgaatg agcacggccg cctgatgtgg cgccatcgca ccctgccgac cgaggcgctg
     1381 acggcgattg ggctgatcgc cacgccgttc gtgctgccgc accttggttt cgcacccgac
     1441 accgtcaatc agatcctgat ctggggtttg ttcggtatcg gtttcgatat cctgtttggc
     1501 tacaccggct tgctgtcgtt cggacaatcg gcgttctacg gcacgggtgg attcgtggct
     1561 gcgtatttgc ttgtcgtggc
//
LOCUS       DATAVD010000988         3594 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1769625, whole genome shotgun sequence.
ACCESSION   DATAVD010000988 DATAVD010000000
VERSION     DATAVD010000988.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3594
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1769625"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..981)
                     /locus_tag="VHX39_18925"
     CDS             complement(<1..981)
                     /locus_tag="VHX39_18925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011383261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HEX3993252.1"
                     /translation="MTASSTAVSGPSLGLLDAYDSTEFYCEMLDGAARDPRIAQVLAR
                     LRQVSPDDLRRRAEIAESELYNLGITFTVYSDRDAIDRILPFDLVPRILTAAEWDHID
                     RGVRQRVTALNAFLWDIYHDQAILRDKIVPESLVLGNANYRPEMVGLDVPHRTYVHVC
                     GVDLVRDETGAFLVLEDNARTPSGVSYVVENRHMMARMFPDLFDDIAVRPVGDYGMRL
                     QGALSEIAPSGDAEPRVVLLSPGVYNSAYFEHIFLAREMGVPLVEGRDLIVEDGRVWM
                     RTTAGLAPVHAIYRRLNDDFLDPDVFNPDSMLGVRGLIDVWRNGRVALANA"
     gene            complement(1261..1926)
                     /locus_tag="VHX39_18930"
     CDS             complement(1261..1926)
                     /locus_tag="VHX39_18930"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX3993253.1"
                     /translation="MGQTIQLKASDGFTLDAYVAGAANATKGLVVIQEIFGVNHHMRD
                     MVDRFAAAGYAVVAPAVYDRVEKGFEVGYTPEDIAKGRDVRMKLDDKQLMLDVEAAAA
                     HLAGKKIGIVGYCFGGTVSWWGATRSKSFSGASCWYGGGIAGTKDEKPNCPVQMHFGE
                     TDASIPMTDVDAVRAAQPKVDSYVYKGAGHGFGCDERGSFSKPDYELAQSRTLEFFAK
                     NLA"
     gene            2170..>3594
                     /locus_tag="VHX39_18935"
     CDS             2170..>3594
                     /locus_tag="VHX39_18935"
                     /inference="COORDINATES: protein motif:HMM:NF023222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3993254.1"
                     /translation="MTDATSSTVPFTGQEFLDSLDDGREVWIYGERVGKITDHPAFRN
                     TARMIARLYDALHADHAEGKHILSCPTEWGGFTHRYFVAPRTIEEQVASRDAIAAWAR
                     LSYGWFGRSPDYKAAFLATLGANTEFYAPFQENARRWYRQSQERVPFINHAIIHPPVD
                     RSMAPGAPGGPTDVYMHITKETDAGIRVSGAKVVATGSALTHFTFVAHHGLIPVQDKN
                     FAVVFMVPTNAPGIKLICRTSNEYRAAALGSPFDYPLSSRLDENDAIFVMDDVLVPWE
                     SVFVHADVDTANNFFPRTGFLPRALLHGCTRLGVKLDFIAGLLLKATELTGTRGFRSV
                     EANLGEVIALRNMIWGLSDAMAKTATPWTGGYILPGGDPGAAYQVLAPEAYVQIKTLV
                     EKTVASGLIYMNSHAADFAAPELRRYLDLYLRGSGGASAEERVKLMKLLWDAVGSEFG
                     GRHELYEINYSGSHEEIRRYALFGA"
BASE COUNT          718 a         1116 c         1066 g          694 t
ORIGIN      
        1 tgcattggcc agcgcaaccc gtccgttgcg ccagacgtcg atcaggccgc gcacgcccag
       61 catgctgtcg ggattgaaca cgtcgggatc gagaaaatcg tcgttcagcc tgcggtagat
      121 tgcgtgcaca ggcgccaggc cagccgtggt acgcatccag accctgccgt cttcgacgat
      181 caggtccctg ccctccacca gcggcacacc catctcgcgc gcgagaaaga tgtgctcgaa
      241 ataggcagag ttgtagacgc cgggcgacaa cagcacgact cgcggctcgg cgtctccgga
      301 cggcgcgatc tcagacagtg cgccctgcag gcgcatcccg tagtcgccaa ccggccggac
      361 cgcgatatcg tcgaacaggt cgggaaacat gcgcgccatc atgtggcggt tttcgacgac
      421 ataggacacg cccgacggcg tgcgcgcatt gtcctccagc accaggaagg cgccggtttc
      481 gtcacgcacc agatcgacgc cgcaaacatg aacgtaggtg cgatgcggaa cgtcgaggcc
      541 aaccatttcg ggccggtaat tggcgttgcc cagtaccagc gactccggaa cgatcttgtc
      601 ccgcaagatc gcctggtcgt gatagatgtc ccagaggaac gcattcaacg cagtgacccg
      661 ctgacgcacg ccgcgatcga tatggtccca ctcggctgcc gtcagaatcc gcggcacgag
      721 gtcgaacggc agaatgcgat cgatggcatc gcgatccgag taaaccgtga aggtgatacc
      781 gagattgtag agttcggatt cggcgatttc ggcacggcgg cgcagatcgt ccggagagac
      841 ctgacgaagg cgtgccagaa cctgcgcaat tctcgggtcg cgggccgcac cgtcgagcat
      901 ctcgcagtaa aattctgtcg agtcgtaggc gtcgagcaag cccaaagacg ggcctgagac
      961 cgcagtggaa gaggctgtca tggcgtgggc ttctcggcgt tgaacatggc cagtgtaaca
     1021 ctccgcagga accaaaccat gcaagacgta ggccatggaa gataattcat cgtgagagga
     1081 tcgcgcctcc aacgcaccgt ccgcccaggc cgggggtcgc tcctcgccag caggtcgcgc
     1141 acaacccctc ggcactgggc cgaggggtta cccgtgaaag tgtatttcgt ggagaaatcc
     1201 gcctgttgtc acggcagctg ccacaatcat gtgcccgctg ccgccaaacg acagccgcga
     1261 tcaggccaaa ttcttcgcga agaattcaag cgtgcggctt tgcgccagct cataatcggg
     1321 cttgctgaag ctgccgcgtt catcacagcc gaagccatgg ccggcaccct tgtagacata
     1381 gctgtcgacc ttgggctgcg ccgcccggac cgcgtctacg tcggtcatcg ggatcgaggc
     1441 atcggtttca ccgaaatgca tctgcaccgg gcaattcggc ttttcatcct tggttccggc
     1501 gatgccgcca ccataccagc atgaagcccc ggagaagctc ttgctgcgtg tggcacccca
     1561 ccacgagacc gtgccaccaa agcagtaacc aacgatcccg atcttcttgc cggcaagatg
     1621 agccgccgct gcctcgacat ccagcatcaa ctgcttgtcg tccagcttca tgcgcacgtc
     1681 gcggcccttg gcgatgtcct ccggtgtgta gccgacttcg aaccccttct cgacccggtc
     1741 gtacacggcg ggagcaacca ccgcatatcc tgcggcggca aaccgatcga ccatgtcgcg
     1801 catgtgatga ttgacgccaa agatttcctg aatcaccacg aggcccttgg tcgcgttcgc
     1861 cgcgccggcg acataagcgt ccaacgtgaa gccatcgctc gctttgagct gaatggtctg
     1921 tcccatacga tcctcccacc tgatagactg atctgctcca tcgcaggccg ccaggatggt
     1981 tgtactgggc ttgaggtcaa ctaccctgtc gagacccgcc ttacgcggcg tccgattgtg
     2041 ctgaattgcg gcaacgacgg tctcgtctcg cgatacagct gaactgttgc ggattgcccg
     2101 ccgttcggtc aggttcggca aaatataaac gtaaccggta cgccggaata aatggggaga
     2161 gccaacgcca tgacggacgc aaccagttcc accgtccctt ttaccggcca ggaatttctc
     2221 gacagcctcg acgatgggcg agaggtttgg atctacggcg aacgggtcgg caagatcacc
     2281 gaccatcccg cgttccgcaa caccgcgcgc atgatcgcca ggctatatga cgcgctgcac
     2341 gccgatcatg ccgaaggcaa acacattcta agttgcccca ccgaatgggg cggtttcacc
     2401 catcgctatt ttgtcgcacc gcgcaccatt gaggagcagg ttgcctcgcg cgatgccatc
     2461 gctgcatggg cgcgcctcag ttacggctgg ttcggccgct cgcccgacta caaagcggca
     2521 ttcctggcga cgcttggcgc caacaccgaa ttctatgcgc cgtttcagga gaatgcccgc
     2581 cgttggtatc ggcagagcca ggaacgcgtg ccgttcatca accatgcgat cattcatccg
     2641 ccggtcgatc gttcgatggc accgggcgcg ccgggcggcc caaccgatgt ctatatgcac
     2701 atcaccaagg agaccgatgc cgggatccgg gtcagcggtg caaaggtcgt tgccaccgga
     2761 tcggcactga cgcatttcac gtttgtcgcg catcacgggc tgatcccggt gcaggacaag
     2821 aactttgccg tggtcttcat ggtgccgacg aacgcgcccg gcatcaaact gatttgccgg
     2881 acatcgaacg agtatcgcgc cgccgctctg ggctcgccgt tcgattatcc gttgtccagc
     2941 cgcctcgatg agaatgatgc gatcttcgtg atggatgacg ttctggtgcc atgggaaagc
     3001 gtctttgtgc atgccgacgt cgatacggcg aacaatttct ttccacgcac cgggtttttg
     3061 ccgcgcgcat tgctgcatgg ctgcacccgt ctcggtgtca aactcgattt cattgcgggc
     3121 ctgttgctca aggccaccga gctcactggc acgcgcggct ttcgcagtgt cgaggccaac
     3181 cttggcgagg tgatcgcctt gcgcaacatg atctggggtt tgtcagatgc catggcgaag
     3241 accgccacgc cctggaccgg cggctatatc ctgcctggcg gcgaccccgg tgcggcttac
     3301 caggtgctgg cgccggaagc gtatgtgcaa atcaagaccc tggttgagaa aaccgtggcg
     3361 agcggtttga tttatatgaa ttcgcacgcc gccgatttcg cagcgccgga actgcggcgg
     3421 tatctcgatc tgtatctgcg cggttcgggc ggcgcctcgg ctgaggaacg tgtgaagtta
     3481 atgaaattgc tgtgggatgc cgtcggctcg gaattcggtg gacggcatga actttacgag
     3541 atcaattaca gcggcagcca cgaggaaatt cggcgttatg cgctgttcgg cgcg
//
LOCUS       DATAVD010000989         3619 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2326223, whole genome shotgun sequence.
ACCESSION   DATAVD010000989 DATAVD010000000
VERSION     DATAVD010000989.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3619
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2326223"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(52..441)
                     /locus_tag="VHX39_18940"
     CDS             complement(52..441)
                     /locus_tag="VHX39_18940"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX3993255.1"
                     /translation="MAKRQSVMWPGFAHSNPIPNASRIGNVVMSSVIGPRDPSTGTTP
                     ETLEEQVKNLFLQLSAAIKAAGGTPDDFLKIEFWARDQAAGRAALNGEWEKMFPDPAS
                     RPARHTQALPANSPAQIQCAFTAVIGG"
     gene            complement(445..1026)
                     /locus_tag="VHX39_18945"
     CDS             complement(445..1026)
                     /locus_tag="VHX39_18945"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3993256.1"
                     /translation="MADNATGLTAPSGLNHLVLNVRNMDESHAFWTEVVGLKQVGKLK
                     ARPDRPNPPNMQFYSCDHAGKDNHHDIALVENPSLPAPPKDWSMFGAPVAVNHIAIAF
                     PTREAWLARLEYLQKQGVKFNRRVDHGMTHSLYINDPNGYGVELLYELPREVWEGDID
                     AALNYAQGLPTEGPEALIDDPDGVPVFRAKETV"
     gene            complement(1052..2119)
                     /locus_tag="VHX39_18950"
     CDS             complement(1052..2119)
                     /locus_tag="VHX39_18950"
                     /inference="COORDINATES: protein motif:HMM:NF039236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX3993257.1"
                     /translation="MWVRNAWYVAAWSHEITGDTLLARTIMNEPLVLYRTGNGSVVAM
                     EDRCCHRLAPLSLGRREGDDLRCMYHGLKFGPDGRCNEIPGQTTVPDRAVVRGYPVVE
                     SGSWIWVWMGEAARADVSQIPSTVSATDPDWQIQTGCLDYAANYQLINDNLLDLSHLA
                     FVHQNTLGKGVPQWATEKPEIIRLERGVRFQRWFRSRGPSHYLGKPEDKFDTWNSYDF
                     IVPGLFIQRPAWYPPGTADRCGGKAPPPSIEPLFIRCDDQAVIPVTETTSRYFYSAGG
                     HSKNASAELAMEIFRFTEVAFHEDKAIIEAQQKVITLDPSRPMLSLAMDGGPNLFRGI
                     MRELMAAETSTTGPAETARAG"
     gene            complement(2124..3164)
                     /locus_tag="VHX39_18955"
     CDS             complement(2124..3164)
                     /locus_tag="VHX39_18955"
                     /inference="COORDINATES: protein motif:HMM:NF039236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX3993258.1"
                     /translation="MFIRNAWYVAAWADEIEAGPLARRICNEPVVLYRDANDKAAALI
                     DMCCHRGAPLHMGRVIEQGLECGYHGLVFDTNGVCVRIPGQDRIPDRARVRSFPLVEQ
                     DGFLWIWMGDAAKADPAAIVSYPWHNDIVNWPHKHTMYHIKANAMLMVDNLMDLTHLG
                     YVHGSTIGGNPMTHVEAKMETVRTNLGLKFTRWLLNSVPPPTYVRAAGFENRIDRAQM
                     FEYIAPGSVLQLSAADEAGTYANGLPENSKLQFRLFHGLTPETDTSCFYFWSTANGFR
                     TDDPATTEQLFKEIAGAFLEDKTVVEGQQIRLTELGENDLVDITTDAARMHMRRTVER
                     LMEEDSRQLAAE"
     gene            complement(3181..>3619)
                     /locus_tag="VHX39_18960"
     CDS             complement(3181..>3619)
                     /locus_tag="VHX39_18960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX3993259.1"
                     /translation="NPVNVVDGQFSGPFVVAAALATGAMGWDSYKLLNDATIRSLLPK
                     VTCEFDTEIEAEFPTNMSGKLTIQAGNKTFEQKVVVPKGEPSNFLTEAELKAKFFGLT
                     TNVLGADRASALAASVLAIDTTSDVSGLVRHAAPLTAARMAGE"
BASE COUNT          691 a         1099 c         1080 g          749 t
ORIGIN      
        1 gcctggacat cacaacatcc gtgcgattcg agttaaagac cggagcggcg cctatccccc
       61 gatcactgcc gtaaacgcgc actggatctg cgctgggctg ttcgccggca atgcctgggt
      121 atggcgtgct gggcgagacg cagggtcagg gaacatcttc tcccattccc cgttcagcgc
      181 cgcgcgacct gctgcctgat ccctggccca gaactcgatt ttgaggaaat catccggcgt
      241 gccgcccgcc gccttgatgg cggcggacag ttggagaaac aggtttttca cctgctcctc
      301 caacgtctcc ggtgttgtgc ccgtcgaggg atcacgtggc ccgatcacgc tcgacatcac
      361 cacgttgccg atccggctgg cgttggggat cgggttcgag tgagcgaacc cgggccacat
      421 gacgctctga cgtttggcca tggctcagac ggtctccttt gcgcggaaca ctggaacacc
      481 atcaggatcg tcgatcagcg cttccggacc ctcggtcggc aggccctggg cgtagttcag
      541 agcggcgtcg atgtcgcctt cccacacttc gcgcggcagt tcgtacagca actcgactcc
      601 gtaaccgttc ggatcgttga tgtacaggct gtgcgtcatg ccgtgatcga cgcggcgatt
      661 gaattttaca ccctgctttt gcaggtattc caaccgcgcc agccaggctt cgcgcgtcgg
      721 gaaagcgatg gcgatgtgat tgacggcgac cggagcgccg aacatcgacc agtccttcgg
      781 cggtgccggc aggctggggt tttccaccag agcgatgtcg tgatggttgt ccttgccagc
      841 gtgatcgcag ctgtagaact gcatgttggg cgggttcggc cggtccggac gggccttcaa
      901 cttgccgacc tgtttcaggc caacgacctc ggtccagaag gcgtgcgatt cgtccatgtt
      961 ccgcacattc agcaccagat gattgaggcc cgatggtgcg gtcagaccag ttgcgttatc
     1021 agccatggga ttgtctcctg ttgtaaacgt attatccggc gcgcgccgtc tccgcgggac
     1081 cggttgtcga agtttccgca gccatcagct cccgcatgat accacggaac aggttcggtc
     1141 ccccatccat cgccagcgac agcatcggac gcgatggatc gagggtaatc actttctgtt
     1201 gggcttcgat gatggccttg tcttcgtgga acgccacttc agtgaagcgg aaaatctcca
     1261 tcgcaagctc ggcgctcgcg ttcttcgagt gtccgcctgc ggaatagaag taccgggatg
     1321 tcgtttcggt taccggaatc accgcctgat cgtcgcagcg tatgaacagc ggttcaattg
     1381 aaggtggggg agccttaccg ccacagcggt ccgcggtgcc cggcggatac caggcaggac
     1441 gctggatgaa caggccaggc acaatgaagt catacgaatt ccacgtatcg aacttatcct
     1501 ctggcttgcc gagataatgt gacggcccgc gcgaacggaa ccaacgctgg aaccgcacgc
     1561 cacgttccaa ccggatgatc tccggttttt ccgtggccca ctgcggaaca cccttgccca
     1621 acgtattctg atgcacgaag gcgaggtgtg acagatcaag cagattatcg ttgatgagtt
     1681 gatagttcgc tgcgtaatcc aggcagcccg tttggatctg ccaatccgga tccgtcgcag
     1741 agaccgtcga gggaatttgc gaaacgtcgg cgcgcgccgc ctcgcccatc cagacccaga
     1801 tccaactgcc gctctcgacc accggatagc cgcggacaac agcccggtca ggaacagtgg
     1861 tttgcccggg aatttcgttg caacgaccgt cgggtccgaa cttcaggccg tggtacatgc
     1921 agcgcagatc gtcaccctcg cgccgcccca aagacagcgg agcgaggcga tgacaacacc
     1981 ggtcctccat cgcgaccacc gagccattgc cggtgcgata caacaccagc ggctcattca
     2041 tgatcgttct ggcgagcaat gtgtcgccgg tgatctcatg cgaccaggca gcgacatacc
     2101 aggcgttacg aacccacatc gggctattcc gccgccaatt gacgagaatc ttcttccatc
     2161 agccgctcca cggtgcggcg catgtgcatg cgtgccgcat cggtggtgat gtcgacgaga
     2221 tcgttttcgc ccagttccgt caggcgaatc tgttgacctt ccacgacggt cttgtcttcc
     2281 aggaaggccc cggcgatttc tttgaacaat tgttcggtgg tcgccgggtc gtcggtgcgg
     2341 aaaccgttgg cggtggacca gaaatagaag caactggtgt cggtttccgg cgtcagaccg
     2401 tggaatagcc tgaactgcag cttgctgttc tcgggcaggc cgttcgcata agtcccggcc
     2461 tcgtcggcgg cactcagctg caggaccgac cccggcgcaa tgtactcgaa catttgtgcg
     2521 cgatcgatcc ggttttcgaa cccggcggcg cgaacataag tgggcggcgg taccgagttc
     2581 aacagccaac gggtgaattt caacccgaga ttggtgcgca cggtttccat tttggcttcg
     2641 acatgggtca tcggattgcc gccgatggtg gagccatgca cgtagcccag atgcgtcagg
     2701 tccatcaggt tgtccaccat cagcatggcg ttggccttga tgtgatacat cgtgtgttta
     2761 tgaggccagt tcacaatgtc gttgtgccac ggataggaaa cgatcgccgc cggatcggct
     2821 ttggccgcat cgcccatcca gatccacagg aaaccatcct gttcgaccag cggaaacgat
     2881 cgcacgcgcg ctcggtccgg gatgcggtcc tggccgggaa tgcgcacgca gacgccattg
     2941 gtgtcgaata cgaggccatg atagccgcat tcgagaccct gttcgatcac gcggcccata
     3001 tgcaacgggg caccacggtg gcaacacatg tcgatcagcg cagccgcttt atcgttggcg
     3061 tcgcgataca gcaccaccgg ctcgttacag atgcgccgag ccagcggccc ggcctcgatc
     3121 tcgtcggccc aggcggcgac ataccaggca ttgcggatga acatgagggc gctcctgttc
     3181 ttattctccg gccattcgcg cggccgttaa gggggcagcg tgtcgcacca gaccggatac
     3241 atccgaggtg gtgtcgatcg caagcacaga tgccgccagc gccgaggcgc gatcggcgcc
     3301 gagcacgttg gtggtcaggc cgaagaattt cgccttcaat tcggcctcgg tcaggaagtt
     3361 ggacggctcg cccttcggca ccacgacttt ttgctcgaag gttttgttgc cggcctggat
     3421 cgtcagcttg ccggacatgt tggtagggaa ttcggcttcg atctcggtat cgaattcgca
     3481 cgtcactttg ggcaacagcg atcggatcgt ggcatcgttc aacagcttgt agctgtccca
     3541 tcccatcgct ccggttgcca gcgcggccgc aaccacaaac gggccgctga actgaccatc
     3601 aaccacgtta accggattg
//
LOCUS       DATAVD010000990         2299 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2700366, whole genome shotgun sequence.
ACCESSION   DATAVD010000990 DATAVD010000000
VERSION     DATAVD010000990.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2299
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2700366"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..139)
                     /locus_tag="VHX39_18965"
                     /pseudo
     CDS             complement(1..139)
                     /locus_tag="VHX39_18965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821243.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            complement(536..880)
                     /locus_tag="VHX39_18970"
     CDS             complement(536..880)
                     /locus_tag="VHX39_18970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003621554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX3993260.1"
                     /translation="MMDWNAYRQQVVAGVGGFAKLSPDTVKGYGAMGTAGQKTGHIDA
                     KNRELIALAVAITLRCDGCITVHVDAARKLGATQEEIAEALGVAVSINAGAAIVYSTR
                     ALDAYAASVETA"
     gene            1002..1961
                     /locus_tag="VHX39_18975"
     CDS             1002..1961
                     /locus_tag="VHX39_18975"
                     /inference="COORDINATES: protein motif:HMM:NF024260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX3993261.1"
                     /translation="MTDRHVDDALSGLAPLLRVRPKLDDFCHFGGAWSSSHAAEPAGG
                     AHFHIVTKGSVELDRPGFGPLRLDAGDILLLPHGDAHTVRVPGSMGQATAPVTTHFRN
                     ALRVQVSVGVEPETELICGRLYFEEAPQNLIVAALPDVIVLRIGAGPLANRFSPIVLG
                     IREELDSGGPGAAAIAKDLASALFVMMLRAHLETSAPADGLLRLLNQRITAQAVLAMV
                     RDPIRTWTLDDLAQIAASSRATLVRAFRTGADMSPMAFLTDLRLGLARHRLASSAESI
                     DQIAAEVGYQSLAAFSRAFLRKYGIRPGEHRYGAHPVQDRISP"
BASE COUNT          439 a          692 c          722 g          446 t
ORIGIN      
        1 tgtcaccatc gatcgctgcc accgccgcga ttaccgcatc ccttgcggcg gcgaggccgc
       61 gcatagcagc ggataatccg gcgatattat cactggctac gagtgcttgg tcgatgaagg
      121 ttcggctgag cgctcgggga aacgctgcgg cgttcgcgcc ggaaagatgc cggggtatca
      181 aaaggcaaac gatacagcag aatgaaaatg accgacggca gcaggaggtg aatcaacacc
      241 ggatgatagg acgcgcggta cagaaattcc cccgaggggc ggagagcgtt gtattccgcc
      301 agcgtcaagc aatctgaaaa gagtcggccg ggatgccgcg gttgtcgaga tcgttccagc
      361 ttttgtgatg ccgtgccgcg catgcagacg gcgccaatag gcgaagggcg tcaatgtcac
      421 caggctgcag gcggcgccga caattccgtt tagccgtcgc aaccatgccc ctccaccagc
      481 cagagcctct tgtccattcc aagttcatgg ttgaacaagc ggctctggcg tgcgctcagg
      541 cagtctcaac cgaggcggca taagcatcca gggcacgggt cgagtagacg atagcggcgc
      601 ccgcattgat gctgacggcg acccccagcg cttctgcgat ctcctcctgg gtcgccccaa
      661 gtttacgcgc ggcatcgaca tgaacggtga tacagccgtc acagcgcagc gtaatcgcca
      721 ctgcaagcgc gatcagctca cggtttttgg catcgatgtg gccggttttc tggccggcgg
      781 tacccatcgc gccatagccc ttcaccgtat cagggctgag tttggcgaag ccgccaaccc
      841 ctgcgacaac ctgctggcga taagcgttcc aatccatcat atgcataacc taatctcctt
      901 tgtggtggtg cttaattagc gcggtgccgg ggtcctgttg atgccgctgc ggcgcaatgc
      961 gatgtccgat cggatcaaac agaggaaaga tagaaaaacg gatgacggac cggcacgtcg
     1021 atgatgcgct gagtggcctg gcaccgctgc tccgggtccg gccgaagctg gacgatttct
     1081 gccatttcgg cggtgcctgg agctcatcgc acgcggctga gccggcaggc ggggcgcatt
     1141 ttcatatcgt taccaaaggc agcgtcgaac ttgatcggcc aggcttcggc ccgctgcgcc
     1201 tggatgccgg tgatatcttg ctactgccgc atggcgacgc ccatacagtc agggttccgg
     1261 gaagcatggg gcaagcgacg gcaccggtta ccactcattt tcgaaacgcg ttacgggtcc
     1321 aggtgagcgt tggcgttgag ccagaaactg aactgatctg cggccgatta tactttgaag
     1381 aggcacctca gaacctgatc gtcgctgcat tgcctgatgt catcgtcctg cgtatcggcg
     1441 caggaccgtt ggcgaaccgc ttcagcccga ttgtgttggg tatccgggag gaactggaca
     1501 gtggcggtcc tggcgccgcg gccatcgcca aagacctggc gagcgcgctg ttcgtgatga
     1561 tgctgcgtgc ccatcttgaa acctcggcgc cagccgatgg cctgctccgc ctgctcaatc
     1621 aacgcatcac ggcacaggcc gtgctggcga tggtgcgtga cccgatccgg acctggacac
     1681 tggatgatct tgcacaaatc gccgcgtcgt cgcgggcgac tctggtccgt gcgttccgaa
     1741 ctggcgcaga catgtcgccg atggcgttcc tgaccgatct gcgccttggt ctggcccgcc
     1801 atcggcttgc aagtagtgca gagtccatcg accagatcgc cgccgaggtg ggctaccaat
     1861 ccctggccgc gtttagccgg gcattcttac ggaaatatgg catccggccc ggtgagcatc
     1921 gctacggagc acatcctgtg caagatcgga taagtcccta acgaccgctc tttgtaaggt
     1981 ggcgagcgct cgccacacgt tatggggttg gctcccccaa ccttgccaag ggggggtcat
     2041 cagtgcgtcc gctttcggga agctcaatcg tgcggctcta cggcaataat gggcgcaaag
     2101 ccgccggtcc cgctatcggc cgcactgggc cagaaggggg atcgagcctt ggatcattgc
     2161 ttcgcttcgt cctggcgacc ccggctgccc ggagttgacg tttgcctggg actggcgagc
     2221 atggggcgcg cgccaggggg atcttagtcg gccggtcgga agcgaacccc cagccgcatc
     2281 aggcgcgcga tctcacccg
//
LOCUS       DATAVD010000991         2204 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2515870, whole genome shotgun sequence.
ACCESSION   DATAVD010000991 DATAVD010000000
VERSION     DATAVD010000991.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2204
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2515870"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1712)
                     /locus_tag="VHX39_18980"
     CDS             complement(<1..1712)
                     /locus_tag="VHX39_18980"
                     /EC_number="2.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008850546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016744 - transketolase or transaldolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX3993262.1"
                     /translation="MNTTKDLAQTGKASSLHNKERRSGTAFQASSAGAGQLQSLAINT
                     IRTLSIDAVQQASSGHPGAPMGLAPVAYTVWQDFLRFDPAAPNWLNRDRFVLSNGHAS
                     MLLYSLLFLTGVNDEHGAPALTLDDIKRFRQIDSKTPGHPEYGKTPGVETTTGPLGQG
                     CGNSVGMALAGRWLAARFNRPDFPLFSYDVYTFCGDGDMMEGVASETASFAGHQKLGN
                     LCWLYDHNSISIEGNTALAFSEDVAARFRAYSWKVHHLADANDTAGLARLLEEFRKTR
                     DAPTLIVVDSHIGYGAPHKQDTGAAHGEPLGEDEVRLAKKNYGWPEDAKFLVPDGVRE
                     HFAQGFGQRGRELRESWQKLFEAYRGKFPDLAEQIERMQRRELPDGWDADLPGFPADA
                     KGMATREASGKVLNAVAPHYPWLIGGAADLAPSTKTHLTFDGAGDLEPKTPGGRNMHF
                     GVREHAMGSILNGMALAGLRPYGATFLIFSDYMKPPIRLAALMELPIIYIFTHDSIGV
                     GEDGPTHQPVEQLLALRSVPDLITLRPADANEVVEAYRTIIKLKRKPACLALSRQPLP
                     TLDR"
BASE COUNT          378 a          691 c          720 g          415 t
ORIGIN      
        1 ctgcgatcca gggtcggcaa aggctgacgg ctcaaggcaa gacaggcggg ttttcgtttc
       61 agcttgatga tcgtccggta ggcctcgacg acctcatttg catccgcggg ccgcagcgtg
      121 atgagatcgg gcaccgatcg caaagcaagg agctgttcga ccggctgatg cgtcggtccg
      181 tcctcgccca ccccgatcga atcgtgggtg aagatataga tgatcggaag ctccatcagc
      241 gcggcgaggc gaatcggcgg cttcatgtag tcggagaaga tcaggaaggt cgcgccgtat
      301 ggccgcagac ctgcgagcgc catcccgttg aggattgagc ccatggcgtg ctcacggacg
      361 ccgaagtgca tgttgcggcc gccaggtgtc ttcggctcca gatcacccgc gccatcgaaa
      421 gtcagatggg tttttgtcga cggcgcgagg tcggcggcgc caccgatcag ccatggatag
      481 tgcggcgcga cggcgttgag cacctttccg ctcgcctccc gcgtcgccat tcccttggca
      541 tcggccggaa aacccggcag atcggcatcc caaccgtccg gcagttcgcg tcgctgcatc
      601 ctctcgatct gctctgccag gtcgggaaat ttgccgcggt aggcctcgaa cagcttctgc
      661 caggactcgc gaagctcgcg gccgcgctgg ccgaagcctt gcgcgaaatg ctcgcgcact
      721 ccgtcgggca cgagaaattt ggcgtcctcg ggccagccgt agttcttctt ggcgagccgc
      781 acctcgtctt cgccgagagg ctcgccgtgg gcggcgccgg tgtcctgttt gtgtggcgcg
      841 ccatagccga tgtggctgtc caccacgatc aaagtcggcg cgtcgcgggt cttacggaat
      901 tcttccagca gcctggcaag acccgccgtg tcgttggcat cggcaagatg atgcaccttc
      961 cagctgtagg cgcggaagcg cgcggccacg tcttcgctga acgcgagcgc ggtattgccc
     1021 tcgatgctga tgctgttgtg atcatagagc cagcacagat tgccgagctt ctgatggccg
     1081 gcgaaagacg ccgtttcact ggcgacccct tccatcatgt cgccgtcgcc gcagaacgta
     1141 taaacgtcgt agctgaacag cgggaagtcc ggccggttga atcgcgccgc aagccatcgc
     1201 ccggctagcg ccatgccgac gctgttgccg cagccctggc ccagcgggcc ggtcgttgtc
     1261 tcgacgcccg gcgtcttgcc gtattccgga tggccggggg ttttgctgtc gatctggcga
     1321 aagcgcttga tgtcgtcgag ggtgagtgcg ggcgcgccgt gctcgtcgtt gacgccagtc
     1381 agaaacagca acgaataaag cagcatcgac gcatgcccgt tggacagcac gaaacggtcg
     1441 cggttgagcc aattcggggc cgcggggtca aaccgcaaaa aatcctgcca caccgtatag
     1501 gcaaccggag caagccccat gggcgccccg ggatgcccag agcttgcctg ctgaaccgcg
     1561 tcgatcgaca gtgtccggat ggtgttgatg gcaaggctct ggagttggcc tgcgcctgcg
     1621 ctcgaagcct ggaatgcggt gccggaccgt cgctctttat tatggagact ggacgctttg
     1681 ccagtttgtg cgaggtcctt ggtcgtgttc atcggggcgt tccctggcgc agccagcagg
     1741 cgcacgcgtg gcgcagagtc gcgccgcttc catgctcagg tgccgctgtc gacaagcccc
     1801 tgatagggga actcagggcc acggatttgg tttcatcgca tctaacccgc cgtcagaggc
     1861 agtcgctggc ctaaactggg cgcgcgcttt taccccgcac agcccgcggg gcgactgaac
     1921 gtccgcttcg ggtcaatcgc taccgaccca atcgccgcca gcgccgcccg atgtcggctg
     1981 ttgccccaat tgccgacatc cggcggacgg gctgagagat cagccggggc acccccccgc
     2041 catgatcagg aagtcgtttt gggatggcag cagggcctga cacgtggccg ttagtctgaa
     2101 agagcaccag cgggcatctg cgagtcatcg cggggctaat cccgctggtc ggtccatgca
     2161 tgggttgggc gcaccaatgg cgaaggcagg tccggcgctc ggcc
//
LOCUS       DATAVD010000992         3879 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2700507, whole genome shotgun sequence.
ACCESSION   DATAVD010000992 DATAVD010000000
VERSION     DATAVD010000992.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3879
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2700507"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..967
                     /locus_tag="VHX39_18985"
     CDS             <1..967
                     /locus_tag="VHX39_18985"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEX3993263.1"
                     /translation="KVLISGGGYGQNLGLEAGNSGLSEGGLLSTSCLMAIPLAIFLAS
                     HSQLLPKFKLMSLAYWGIAGLALATAIGTYERSALVGLIVLGLYMWTRTKHKIGFGIV
                     VIITACLVIFTTSHAWNARVDTITNFEQENSAYVRILVWKWTLGFVADHPLGGGFASY
                     LVNHIEIPATSTSAGAVEFGRAFHSIYFEVLGEHGYPGLFIFLLLAGSTLLMLRRLTK
                     KARPYPELKWVIGLSDALQSGLAVFLTSGAFVGIAFQPMFWYFISMSICLNAYVWRVE
                     RADAQVVTGWRAMAMAPVRHFPPVAEVPGWRQRAASTQSPDAPLG"
     gene            1085..2743
                     /gene="oxc"
                     /locus_tag="VHX39_18990"
     CDS             1085..2743
                     /gene="oxc"
                     /locus_tag="VHX39_18990"
                     /EC_number="4.1.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF006721.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008949 - oxalyl-CoA decarboxylase
                     activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0033611 - oxalate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxalyl-CoA decarboxylase"
                     /protein_id="HEX3993264.1"
                     /translation="MSKVDGATLMARSLKQQGVEYMFGIVGFPVGPIAVAAQKAGIQY
                     IGMRNEQSASYAAQAVGYLTGRPGAALVVSGPGVVHGLAGLANAQQNCWPMILIGGAS
                     PTYQNGMGAFQEERQVQIASPFCKFAHAVEHVHRIPFYVEMAVRNSIYGRPGATYLDM
                     PDDIILGEVDEEKVHQAGTIGEPPRMQAMDQDVDKALNILESAERPLVIVGKGMAWSR
                     AEDEVRAFVERTGVPFLASPMGKGVMDDTHPLSVGAARSHALQEADVIFLLGARLNWI
                     MHFGLPPRFNKKVRVVQLDISPEAIGQNVPAEVGLVGDGKAIVGQFNKALENRQWFYP
                     KDTPWHAAIAEKSAANARQIKPMIDDNSTPTNYYRALKDISAWTPSNAVIIGEGANTM
                     DIGRTQLPNASPRLRLDAGSYGTMGIGMGFAIAAAVVHPDRPIISVSGDSAIGFSGME
                     METACRYQLPVKIVVLNNGGIGGGIAELPADRRQSPPRVLTVGARYDKMMEAFGGKGW
                     FIEDPKDLRGALDAAMEFKGPALVNVRLHPEAGRKPQQFGWHTA"
     gene            complement(2799..3248)
                     /locus_tag="VHX39_18995"
     CDS             complement(2799..3248)
                     /locus_tag="VHX39_18995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993265.1"
                     /translation="MLHIAVMFSAISPIVFEHRLAQAIRLWVATGFRLLLGFTVAGLV
                     YFAVLLAFVSTYKLTQPIEAVAYGIGFAVATLLAVIAGTLISPARLSRIIIQGVCALA
                     ILFPLGVVVYFGMTGTWRSFYLLYLAGSMAGGYGIARLTPGARLHHI"
     gene            complement(3383..>3879)
                     /locus_tag="VHX39_19000"
     CDS             complement(3383..>3879)
                     /locus_tag="VHX39_19000"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HEX3993266.1"
                     /translation="PPPRRTRRLSCFRLQNSQRTMSYVSNSTCRHRFGCSGIASLEFA
                     LILMPFMVLLIAVFDIGRYLFTVQAMTTLMMNAERAIMISPGLGSQPLCGVTVASWTS
                     MMGITPPPLLDPTQGTICINTISPQGVYQIQVTVTYPFAADLPGLSGLAPNGKLIETA
                     TNSF"
BASE COUNT          746 a         1055 c         1327 g          751 t
ORIGIN      
        1 aaaggtgctc atttccggcg gcgggtacgg ccagaacctg ggtctggaag cgggcaattc
       61 aggtctcagt gaaggcggat tgctctccac ctcctgcctg atggcgattc cgctggcgat
      121 tttcctggcc tcgcacagcc agcttttgcc gaaattcaag ctgatgtcct tggcgtactg
      181 gggtatcgcc gggctggcct tggccacggc gattggcacc tatgaacgca gcgcgctggt
      241 cgggctgatc gtgcttggcc tctacatgtg gacgcggacg aaacacaaaa taggtttcgg
      301 aattgtcgtg atcatcacgg catgcctggt gatattcacg acgtcgcatg cctggaacgc
      361 ccgcgtggat acgatcacca atttcgagca ggaaaactcc gcctatgtcc gcattcttgt
      421 ttggaaatgg acgctgggat ttgtcgccga tcacccgctt ggcggtggct tcgccagcta
      481 tcttgtcaat cacatcgaaa tccccgcgac cagcaccagt gcgggcgccg tggagtttgg
      541 ccgggcgttt cacagcatct actttgaggt gcttggggag catggctatc cgggattgtt
      601 cattttcctg ctgctggctg ggtcgacact cctgatgttg cggcggctta ccaagaaggc
      661 gcgcccgtat ccggagctca aatgggtgat cggcctgtcc gatgccttgc aaagcgggct
      721 ggccgtgttc ctgaccagcg gtgcgtttgt cggcatcgcc tttcagccga tgttttggta
      781 tttcatttcg atgagtattt gccttaacgc ttacgtgtgg cgggtcgagc gggcggacgc
      841 gcaggtcgtt actgggtggc gggccatggc gatggcgccc gtccggcatt ttccccccgt
      901 cgccgaagta cctggctggc gccagcgtgc agccagcacg caatcgcccg atgctccgct
      961 ggggtagggc gtcgaactcg acgctcttcc caggtgacga ataaacgctc agtctaaccg
     1021 gtgatgcggt cccggatacg aggacactgc cgggacccga tcacaacgaa cggggggaaa
     1081 gcaaatgagc aaggtcgacg gtgccacctt gatggcacgc agcctgaagc agcaaggcgt
     1141 cgaatacatg ttcgggatcg tcgggtttcc ggtgggaccc atcgcggtgg ccgcgcagaa
     1201 ggcaggaatc cagtatatcg gcatgcggaa cgaacagtct gcgtcctatg ccgcgcaggc
     1261 ggtggggtac ctgaccggtc ggcccggcgc ggcgctggtc gtgtctggcc ccggcgtggt
     1321 gcatgggctc gcgggacttg cgaatgcgca gcagaactgc tggccgatga tcctgatcgg
     1381 cggtgcctcg ccgacctacc agaatggcat gggcgcgttc caggaggagc ggcaggtgca
     1441 gatcgcgtcc cccttctgca agttcgcgca tgcggttgag catgtgcatc gcattccgtt
     1501 ctacgtggaa atggcggtgc ggaattcgat ctatggccgg ccgggcgcga cctacctgga
     1561 tatgccggac gacatcatcc tgggcgaggt ggacgaggag aaggtgcatc aggccgggac
     1621 gatcggtgaa cctccgcgca tgcaggcaat ggaccaggat gtcgacaagg cgctgaacat
     1681 cctggaatcc gccgaacggc cgctggtgat cgtcggcaag ggcatggcct ggtcgcgggc
     1741 cgaggacgag gtgcgggcgt ttgtcgaacg gaccggtgtg ccgttcctgg cctcgccgat
     1801 gggcaagggg gtgatggacg atacgcatcc gctgtcggtg ggcgcggcgc gcagtcacgc
     1861 gctgcaggag gctgatgtca tcttcctgct gggcgctcgt ttgaactgga ttatgcattt
     1921 cgggctgccg ccgcggttca acaagaaagt gcgggtggtg cagttggata tctcgccgga
     1981 agcgatcggg cagaacgtgc cggccgaggt ggggctggtc ggcgatggga aagcgatcgt
     2041 cgggcagttc aacaaggcgc tggaaaaccg ccagtggttc tatccgaagg ataccccctg
     2101 gcacgcggcg atcgcggaga aatcggcggc gaatgcccgg cagatcaagc cgatgatcga
     2161 cgacaattcg accccgacaa actactaccg ggcgctgaag gatatcagtg cgtggacgcc
     2221 gagcaacgcg gtgattatcg gcgagggcgc caacacgatg gatatcgggc gtacccagtt
     2281 gccgaacgcc tcgcctcggc tgcggctgga cgccggcagt tatgggacga tggggatcgg
     2341 aatgggcttc gccattgccg cggcggtggt gcatccggat cggccgatca tttcggtatc
     2401 aggggactcg gcgatcgggt tttcgggcat ggagatggag accgcgtgcc gttaccaatt
     2461 gccggtgaag atcgtggtgc tgaacaatgg cggcatcggg ggtgggatcg cggaactgcc
     2521 ggcggatcgc cgtcagtcgc cgcctcgggt gctgaccgtc ggggcgcgtt acgacaagat
     2581 gatggaggcg tttggcggca agggctggtt tatcgaggac ccgaaggacc tgcgtggagc
     2641 cttggatgcg gcgatggaat tcaagggacc ggcactggtg aatgtgcgat tgcatccgga
     2701 ggccggacgc aagccgcagc aattcggttg gcatacggcg taacgctgct ggctggagcc
     2761 ccgatcgcct ggtccgccgg tgatcggtgg tatctgtgtc agatgtggtg aagccgcgcg
     2821 cctggtgtca ggcgcgcgat gccgtatcct ccggccatgc tgcccgcgag atacagcaga
     2881 tagaatgacc tccaggtgcc ggtcatgccg aaatagacga cgacgccgag gggaaacagg
     2941 atcgcgaggg cacagacgcc ttggatgatg atcctcgaaa gccgagcggg cgatatcagg
     3001 gtgccggcga tgacggcgag tagcgtggcg acggcgaagc cgatgccata tgccacggcc
     3061 tctatcggtt gagtgagctt gtaggtcgaa acgaacgcca gcaggacggc gaaatagacc
     3121 aggccggcta cggtgaaccc gaggagaagc ctgaacccgg ttgccaccca gagcctgatg
     3181 gcctgtgcca agcgatgctc gaacacaatg gggctgatcg cgctgaacat gaccgcgatg
     3241 tggagcatgc gccgcctccc gcccgcgggg tcggatcgtc agcgggcgag gaggtattca
     3301 gcgctgaaat agattaccaa aaggtttccc aatggcgtga ccgggcggtg gagtagggaa
     3361 attccgtgtg gttggcgggg ggtcagaatg aattggtcgc cgtctcaatc agcttgccgt
     3421 ttggcgccaa gccgctgagt cctggcaaat ccgccgcaaa tggatacgtc acggtcacct
     3481 gtatctggta gaccccctgg ggactgatag tattgataca gatggttccc tgtgtgggat
     3541 cgagcagcgg cggtggcgtg atgcccatca tgctggtcca acttgctact gtgacaccac
     3601 acagaggctg cgatcccagt cccggagaaa tcatgatggc gcgttctgca ttcatcatca
     3661 gcgttgtcat cgcctgaacc gtgaacaagt accgcccaat gtcgaacacg gctatcagca
     3721 ggaccatgaa tggcatcaga atcagcgcga attcaaggct ggcgatgccc gagcagccga
     3781 atcgatggcg gcaagtgcta ttggacacgt acgacatagt tcgctgagag ttctgtaatc
     3841 tgaagcagga taaacggcga gtacggcgtg gtggcggtc
//
LOCUS       DATAVD010000993        10030 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3445110, whole genome shotgun sequence.
ACCESSION   DATAVD010000993 DATAVD010000000
VERSION     DATAVD010000993.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10030
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3445110"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="VHX39_19005"
     CDS             <1..572
                     /locus_tag="VHX39_19005"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX3993267.1"
                     /translation="GAHGPGHIDVDLGRLGADWYTGNCHKWLCAPKGCAFLWTSAAHQ
                     ADTHPTVISHGLGKGYLQEFDWTGTRDPSAFLSIGAALDFHFHLGGPALRQRNIDLAA
                     ESASLVARRLNTETIDTECAGAMRLVRLPVAQSTDWAGLRAKLLQAGTDAPVHAIGGA
                     LWLRLSTFAYNELEDYARLADIVARVLRE"
     gene            578..1666
                     /locus_tag="VHX39_19010"
     CDS             578..1666
                     /locus_tag="VHX39_19010"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010505462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3993268.1"
                     /translation="MSVEFIGMIHHRQASEIHPPSSIVLDRGYIREFAQSAEAGGFDR
                     VLVGYFADGPDGFLLAAAAAAHTERLGFLVAHRPGYVAPTLAARKFATLDQITDGRAA
                     IHVITGGDDAEQFRDGDTLTKEERYERTDEYVGILKRIWTEPGPSVDHEGRFYRFKNA
                     STAMRCVQQPRIPIYFGGASDAALRVSAKHADVYALWGETHAQVREITARLRAEAARI
                     GRSLRFSLSFRPILAPTEDEAWARAERIKERILEIRAKAGLASREPPNEGSRRLLAAA
                     AQGERLDKRLWTGAALATGARGNTTSLVGTPEQVAEALCDYYDLGVTTFLIRGFDPLE
                     DNIEYGRHLLPLTKKLIAERDASRAAAE"
     gene            complement(1646..3277)
                     /locus_tag="VHX39_19015"
     CDS             complement(1646..3277)
                     /locus_tag="VHX39_19015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX3993269.1"
                     /translation="MNIDPVTIEVIGSALSSIVEEMGEALIRASYSTNIKERRDCSTA
                     LFDLAGNTLCQAEHIPMHLGSFLGLIPHIMKRHPIDQMQPGDVFCGNDAYEGGGTHLP
                     DIVLAEPVFVNGEMTFWAVNLAHHADFADRGHAHIYQEGLRIPPVRLYRGGELQTDVQ
                     ELILLNCQVPRERLSDFRAQMAANRLGVERMRALCTKYGRDVVLAAGAALQDYAERKM
                     RAGIAAIPDGTYRFADTYDCPEIDGEFDVTCAITVAGDTMHLHFDGPPQIRAGLNMTY
                     TALLSTVYYAVKAVVDPTIPPNAGLARPLHVTAPEGTVVNCVHPAAVNGRLSLCQRVV
                     DLIFGALAQAVPERVTAASNGACFSITFAGHQPQDNSLWVYLETIGGGSGARPSKDGL
                     DGVHVHMTNTSNLPVEALETEYPLTLLRYELVDGSGGAGRWRGGMGLRRVYRAEAPCR
                     VRVDGARFLSAPWGLDGGEPGGKANVVLRDGAQSFAHGHGGLRAGEIIDITIAGAGGH
                     GSPLRRDPALVRRDLAEGRINEQTARDVYSLRGGA"
     gene            complement(3274..5313)
                     /locus_tag="VHX39_19020"
     CDS             complement(3274..5313)
                     /locus_tag="VHX39_19020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX3993270.1"
                     /translation="MAWRVGVDSGGTFTDVCLFDETTGRIEVWKVSSTPDDPSLGIAT
                     GVAEAIAHVGGTPGAIAWFGHGTTVATNALIQHRGARTGLITTDGFRDLLEIGRQKRP
                     DLYDLMVDKPVPLVTRDLRLEVPERLHHDGSVELALDEAAFRNAVRRLRAANVEAVAV
                     CFLYGFINTAHEVTASSILHEEFPEAFVSISHDVAPEFREFERLSTTVVNAYLGPVMR
                     GYIQRLGERLRGLGICVIPHLTQSNGGVISFEQAERLPVRTVLSGPSTGVVGAREVGR
                     LAGYPDLITFDMGGTSTDVALLSDGNCRLSTEAVVHGYPIKAPMLDIHTVGAGGGSIA
                     YIDGGLLKVGPRSAGADPGPVCYGLGGTEPTVTDANVVLGLLNPGYLLGGRMTIRHDL
                     AGEAIGRLATSLGLDPMATALGILSVVTANMVRAIRVISVQRGYDPRDYTLIAFGGAG
                     PLHAARLAQELDIGRVLVPRNPGVLCAMGLLLTDLRADFAVTKLQKLEQAALPDMTQA
                     FRSLAGRARSWFESEGIAAENQRTNRTVDMRYSGQNYELSVQLPDGPIGPHSIDALAD
                     GFAAMHRRLYGFAADDEPVQLVTFRVEATGIVPKATLTQSPHCGAPAVPEYRPVWVEK
                     AGDFVPCAIYDRDRLAAGDNFAGPAIIEQMDATTFVPAGMTARVDPWLNLILESA"
     gene            5363..6667
                     /locus_tag="VHX39_19025"
     CDS             5363..6667
                     /locus_tag="VHX39_19025"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX3993271.1"
                     /translation="MSPPVDLVQSDPDLPERVRVVVIGGGIIGVTTALSLAERGHSVA
                     LCEKGRIGGEQSSRNWGWCRTMGRDFSEIPLAMESLRLWRGMNERTGRETGFRQPGIM
                     YLCENEKEVAAQEAWLDQARLYQVDSRLVRGQELEAILPGAGARFVAGLHTPTDGRAE
                     PAHAAPAIAEAARDQGAKIFTNCAVRGIDLHNGRLVGVVTERGRIRCDAAVLAGGAWC
                     RLFAGNAGLDLPQLKVLGSVFRTEPLTGGPEITASGSVFAFRKRLDGGYSIARRNANT
                     AELTPDHFRLLSDFFPRVLASRHEIRLRLGSRTWQELRTARRWSLDQTTPFEAVRVLD
                     PKPKQGVLAEARDILSRIFPAFANLRVAESWAGLMDVTPDAVPVIDEVKRIPGFFIAT
                     GFSGHGFGIGPGAGRLMADLVAGDVPVVDPKPFRLDRFTRAR"
     gene            6670..7581
                     /locus_tag="VHX39_19030"
     CDS             6670..7581
                     /locus_tag="VHX39_19030"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX3993272.1"
                     /translation="MFWSGSHAQRGMFAFICFVWGTTWLAMKVGIASVTPGVFAGLRW
                     TVAGAVLLLILRLRGERVRPPLRFVPRLAFVSVLLITLNQVIQLYGLKYITAGLAAVI
                     SSALTPISLLGFAVAFGQERFTKRQVAALATGAIGVCTLFGPSAFAGTLHLSEVGGAL
                     GVTIGCLCYTAGSVMTQPMMRYFGAVQLAGLTDMVGGMILLVASLVLEPGAWTSITLH
                     WGWPAFLAWLYLLVPGALLSTTMYFLLVRDWGASKPGLYAFISPVIAVVLGAWLFGEH
                     LDWGDAVGMALMLGAAGLALRRVEVAA"
     gene            7586..8848
                     /locus_tag="VHX39_19035"
     CDS             7586..8848
                     /locus_tag="VHX39_19035"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair exonuclease"
                     /protein_id="HEX3993273.1"
                     /translation="MATFRFLHCADLHLDSPLRGLEADPDAPVDKIRGATREALHNLV
                     NFAIEQRVDFVVAAGDLYDGDLRDWHSGHFLTGEITRLTNAGIPFIAIRGNHDAESVI
                     TRYLRMPNDNARMLDHRRPETWRLSNLPVSIHGQSFATKAVTENLAAAYPAPDPDRFN
                     IGLLHSSVGEREGHDTYASCSVEQLHNHGYDYWALGHVHKRDVLARDPWVVFPGNLQG
                     RHIRETSAKGATLVTVTDGRIAHEPQHIAFDTVRWARVHVELTENADEDAALTQLRLA
                     LAEALEQAEGRLLAARIELSGACLAHDSFSKDLGAAREKIRDAAISVAGPGMIWTETI
                     NIATKPRKLPEQRDDATGQLIGTLQAATGAEVADDVRAYASVMLEKSNLLRQALGAEH
                     AANAVATDTGLVDAVERARDMLLGLLDG"
     gene            8855..>10030
                     /locus_tag="VHX39_19040"
     CDS             8855..>10030
                     /locus_tag="VHX39_19040"
                     /inference="COORDINATES: protein motif:HMM:NF024904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX3993274.1"
                     /translation="MHLTTVTLQRYGNYASERILFCARPGAVNILHAPNSAGKSVLRN
                     AIADLLFGIHNQTPMDFRFGYSGMRIAADIVRPGQPPTSFSRRKTRGNVVTGADDQAL
                     DPGFLHGILAGRDRKLLERLFVLDTEALRAGAADLLQSGGDVASALLAAAGGIRQART
                     LKQTLERKRDDLAPERRTASRPFYQALDSFTDARRRSGAETLRPEAWFRQQQELEDLE
                     ANRRRYNSEAEAASTEIARLQRIRRVRRWLTQWTDATAWLAAHPDAPRLGLEIRRLLE
                     QARLDVAMRQEAGRLARDTLERAEQNADDVTVNVELLAHAAQIQQLVEDAGGARTDSN
                     DLPGRQVERDVSLARLRTLLVQLGSDLPPERAAEALPTRALLARTRQRIKDQAGLAAA
                     "
BASE COUNT         1931 a         3116 c         3039 g         1944 t
ORIGIN      
        1 acggcgcgca tgggcccggt cacatcgacg tcgatttggg ccgtctcggc gctgactggt
       61 ataccggcaa ctgccacaag tggctgtgcg cgccaaaagg ttgtgcgttt ctctggacgt
      121 ctgctgcgca ccaggcggac actcatccga ctgtcatatc gcatggtctt ggcaaagggt
      181 acctgcagga attcgactgg accggaacgc gcgacccttc cgcatttttg tcgatcggcg
      241 cggcgcttga tttccacttc catctgggcg gtcccgcgtt acgccaacgc aacatcgacc
      301 ttgccgccga gtctgcgtcc ctggtagcac gccgcctgaa cacggaaaca atcgacacgg
      361 aatgcgcggg agccatgcga ttggtgcgct tgccggttgc acagagcacg gattgggccg
      421 ggctacgggc caaactgctg caggccggca cggatgcgcc ggtgcatgcg atcggcggcg
      481 ccctctggct tcggctatcc acgttcgcct acaatgaact ggaagattat gcgcgcctcg
      541 ccgacatcgt cgcgcgcgtg ttgcgggagt aagcgggatg agcgttgaat ttatcggcat
      601 gatccaccat cgccaggcgt cggaaatcca tccgccgtcg tcgatcgtgc tcgaccgcgg
      661 ttacatccgg gagttcgccc aatcggcgga ggcgggagga ttcgatcggg tcttggtggg
      721 gtatttcgcc gacggccctg atgggttcct actcgcagct gctgcggcag cgcacaccga
      781 gcggttgggt tttcttgtcg cacatcggcc aggctacgtt gcacccactc tggcggcacg
      841 aaagttcgcc accctggacc agatcaccga cggacgcgca gcgatccatg tgattacggg
      901 cggcgatgac gccgaacaat tccgtgacgg cgatacgctg accaaagaag aacgctatga
      961 acgcaccgac gaatatgtcg gcatcctgaa gcggatctgg accgagccgg gcccatccgt
     1021 tgatcatgag gggcgatttt atcgtttcaa gaacgcctcg accgcgatgc gctgcgtgca
     1081 acaaccccgc atcccgattt atttcggtgg cgcgtcggat gcggcgctgc gcgtttccgc
     1141 caaacatgcc gatgtttatg cattgtgggg cgagacccac gcccaggtgc gagaaatcac
     1201 cgccagactg cgtgccgaag ctgctcgcat cggccgctcc ctgcggttca gcctttcttt
     1261 ccgacccatc ctcgccccca ccgaagatga agcctgggcg cgggcggagc gcatcaaaga
     1321 aaggatcctc gagattcgtg ccaaagccgg gctggcgagc agagagccac cgaacgaagg
     1381 ttcgcgccgt ttgttggctg ccgcggccca gggcgaaaga ctggataaac ggctgtggac
     1441 cggagcggcg ctggcgaccg gcgcacgtgg caataccacc agtttggttg ggactccgga
     1501 acaggtcgcc gaggcgttgt gcgattatta cgacctcggc gtcaccacgt ttctgatccg
     1561 cggcttcgat ccgttggagg acaatatcga atatggccgc catctgttgc cgctgaccaa
     1621 aaagctgatt gccgaacgcg acgcctcacg cgccgccgcg gagtgaatac acgtcccgcg
     1681 cggtttgttc attaatgcgg ccttctgcaa gatcacgcct gaccaacgcg gggtcgcgcc
     1741 gcaatggcga accatggccg cccgcgccgg caatggtgat gtcgatgatc tcgccggccc
     1801 gcaacccgcc atgaccgtgt gcgaacgatt gcgcgccatc gcgtagcact acgtttgcct
     1861 tgccgccggg ctcgccacca tcaagacccc agggtgccga caaaaaccga gcgccatcga
     1921 cacgaacccg gcacggcgcc tcggcgcgat agacccggcg cagtcccatc ccgccccgcc
     1981 accgtcccgc accgccggac ccatccacga gttcgtatcg taacaatgtc agagggtatt
     2041 ccgtttccag tgcctcaacc ggcaggttgg acgtgttggt catatggaca tgcacgccat
     2101 ccagcccatc cttggatggc cgcgcaccgg atccgccgcc gatcgtttcc agatacaccc
     2161 ataacgaatt atcctgcggt tgatggccgg caaaggtaat ggaaaaacaa gcgccgttgc
     2221 ttgccgccgt tacccgctcg ggcaccgcct gagccaaggc gccaaaaatc aagtccacaa
     2281 cacgttgaca taggctgaga cgtccgttca ccgctgcggg gtgcacgcag ttcaccactg
     2341 tgccctcggg tgccgtgaca tgcagcggcc gggcgagacc ggcattcggc ggaatcgtcg
     2401 gatcgaccac cgctttgact gcgtaataaa cggtggaaag cagcgccgtg taggtcatgt
     2461 tgaggccggc acgaatttgc ggcggtccgt caaaatgcag atgcatcgta tcgccagcca
     2521 ctgtgattgc gcaggtcacg tcgaactcgc cgtcgatttc cgggcaatcg taggtgtcgg
     2581 cgaaccggta tgtgccatcc gggatcgcag caattccggc gcgcattttc cgttccgcgt
     2641 aatcttgcaa cgcggcaccc gcagcaagca cgacatcgcg tccgtatttc gtgcataatg
     2701 cacgcatgcg ttccacaccc aaacgattgg cagccatctg ggcgcgaaaa tccgacagcc
     2761 gctcccgcgg gacctgacaa ttcagcagga tcaactcttg gacgtcggtc tgcaattcgc
     2821 cgcctcgata caacctgact ggcgggattc gcaggccctc ctgataaata tgcgcatgtc
     2881 cgcgatcggc gaaatccgca tgatgcgcca ggttcacagc ccagaatgtc atctcgccat
     2941 tcacgaacac gggttcggcg aggacaatat cgggcaaatg ggtgccgccc ccctcatacg
     3001 cgtcattgcc gcaaaacaca tcgccgggct gcatctggtc gatcggatgc cgtttcatga
     3061 tatgtgggat caggccgagg aagctgccga gatgcattgg gatgtgctcg gcctgacaca
     3121 acgtgttgcc ggcgagatcg aacagcgctg tcgagcaatc gcgccgttcc ttgatattcg
     3181 ttgaatagga cgcacgaatc agcgcctcgc ccatttcctc gacgatcgag gacagggcgc
     3241 tgccgatgac ttcaatggtg acgggatcga tgttcatgct gattccaaaa tcaggttgag
     3301 ccaggggtcg acgcgagccg tcatgccagc cggaacgaat gttgttgcat ccatttgttc
     3361 gatgatcgcc ggaccagcga aattgtcgcc cgccgccagg cgatcgcggt catatatcgc
     3421 gcacggcacg aagtcgccag ctttctccac ccacactggg cggtattccg gaacagccgg
     3481 cgcaccgcag tggggacttt gcgtcaatgt tgcctttggc acgatgcccg tcgcttccac
     3541 acggaaggtg accaattgca ccggctcatc gtctgcggcg aaaccgtaca gccgccggtg
     3601 catggcagcg aaaccatccg ccagagcgtc gatactgtgc ggtccgatcg gtccgtcagg
     3661 gagctgaact gaaagttcat agttctgccc ggagtatcgc atatccacgg tgcgattggt
     3721 tcgctgattt tccgctgcta tgccttcact ttcgaaccat gatcgagccc ggcccgccag
     3781 tgagcgaaag gcttgcgtca tatcgggtaa cgctgcctgt tccagtttct gcagtttggt
     3841 tactgcgaag tcggcacgaa gatcggtcaa caacaggccc attgcgcaca gtaccccggg
     3901 attgcggggc accaaaactc tcccgatatc caactcctga gccaaacgag cggcgtgcaa
     3961 aggcccagcg ccgccaaatg cgatcagagt gtagtcgcgc gggtcatagc ctcgctgcac
     4021 ggaaatcacc cgtatcgcac gcaccatatt ggcggttacc accgacagta ttccgagggc
     4081 agtcgccatc gggtccaggc ccagggacgt tgccaaccgg ccaattgcct cgcccgccag
     4141 atcgtgacgg atcgtcatgc ggccgcccag aagatagccc gggttgagca agccgagcac
     4201 aacgttggcg tcagtcacag ttggttccgt gccgccaaga ccgtaacaga caggcccagg
     4261 atcggcgccg gcactgcgcg gaccaacctt aagcaggcca ccgtcgatat aggcgatcga
     4321 gccgcctccg gcaccgacgg tgtgaatatc cagcatcggc gctttgatcg gatagccatg
     4381 tacgacggct tccgttgaaa ggcgacagtt tccatcgctc agcagtgcga cgtcggtgga
     4441 ggtaccgccc atgtcaaatg ttatcagatc gggatatcct gccagtcgac caacctcccg
     4501 cgcgccgaca acgccggtcg atggacctga taacacggtg cggaccggca atcgttccgc
     4561 ttgctcaaag ctgattacac cgccgttcga ttgcgtcaga tgcggtatca cgcaaatccc
     4621 caaaccccgc aggcgttcgc caagccgctg gatataaccc cgcatgactg ggcctagata
     4681 cgcgttcaca acggtggtcg acagccgttc gaactcgcgg aattccggag cgacatcgtg
     4741 ggaaatgctg acgaaggctt cgggaaactc ctcgtgcaaa atactggacg cagtgacttc
     4801 gtgagcggta ttgataaagc catacagaaa acacaccgcg accgcttcaa cattcgctgc
     4861 gcgcaaacgg cgcacggcat tccggaatgc ggcctcgtcc aacgccagtt caaccgagcc
     4921 atcgtgatgc aacctctccg gcacttctaa ccgaagatca cgcgttacca acggcaccgg
     4981 cttgtcgacc atcagatcgt acaggtccgg acgtttctgc cggccgattt ccagcaaatc
     5041 gcgaaacccg tcagtcgtga ttaatccggt tcgcgcgccg cgatgctgga tcagtgcatt
     5101 tgttgcgaca gtcgtgccgt ggccgaacca ggcaatcgcg cccggcgtgc cgccaacatg
     5161 tgcgatcgct tcggcaacgc cggtggcaat gccgagtgac ggatcgtctg gcgtggagct
     5221 gaccttccaa acctcgatac ggcccgtcgt ctcgtcgaac aggcaaacat cggtaaaggt
     5281 tccgcctgag tcgacgccaa ctcgccacgc catgccgcat ccttggtggt caacaggtcc
     5341 gaatcagagt accgtaaagg ccatgtcacc acctgtcgac ctcgttcaat ccgacccgga
     5401 tttgccggag cgcgtacgcg tcgtcgtcat cggcggcggc atcataggtg taacgacggc
     5461 gttatccctg gcggagaggg gacattcggt cgccctttgc gaaaagggcc gcatcggtgg
     5521 cgagcaatcc agtcgcaatt ggggctggtg ccgcaccatg ggccgcgact tttccgagat
     5581 accgctggcg atggaaagct tgcgactctg gcgcggcatg aacgaacgca ctggccgcga
     5641 aaccggattt cgacagcccg gcatcatgta tctgtgcgag aacgaaaagg aggtcgcagc
     5701 ccaggaagcg tggttggatc aggcgagact ttatcaggtt gattcgagac tggtgcgcgg
     5761 gcaggagctc gaagctatcc ttccgggagc cggtgcccgc tttgtcgccg gtctgcatac
     5821 gccgaccgat gggcgcgctg aacctgccca tgccgcgccc gccatcgccg aggcagcgcg
     5881 cgatcaaggc gcaaagattt tcaccaattg tgccgtccga ggcatcgact tgcataacgg
     5941 acgacttgtc ggcgtcgtca cggagcgcgg aagaattcga tgcgatgccg ccgtgctcgc
     6001 cgggggggcc tggtgtcggt tattcgccgg caacgccggg ttggatctgc cgcaattgaa
     6061 ggtccttggc tcggttttcc gcaccgaacc gctaaccgga ggcccggaaa tcaccgcgtc
     6121 cggctcggtg ttcgcatttc ggaagcgtct cgatggcggc tattcgatcg cccggcgcaa
     6181 tgccaatacc gcggaactga cgccggacca tttccgtctg ctgtccgact ttttcccacg
     6241 cgtgctcgcc agccgccatg aaatccgtct gcgtctggga agtcggacct ggcaggagtt
     6301 gcgcaccgct cgacgctggt cgctcgatca gacaactccg ttcgaagcgg tccgtgttct
     6361 cgatcccaaa ccaaaacaag gcgtcctggc ggaagctcgg gacatcctgt cccgcatctt
     6421 ccccgccttc gcgaatcttc gggtcgccga atcctgggcc ggtctgatgg acgtcacgcc
     6481 cgatgcggtc ccggtgatcg acgaagtcaa acgcatcccc ggctttttca tcgccaccgg
     6541 cttttctggc catggtttcg gcataggacc gggagccgga cggctgatgg cggatttggt
     6601 cgcgggggat gtgccggtgg tcgatccaaa acccttccgt ttggaccgct ttacgcgcgc
     6661 tcgctgacga tgttctggtc cggcagccat gcccaacgcg gcatgttcgc gttcatttgc
     6721 tttgtctggg gtaccacctg gctcgccatg aaggtcggca tcgcatcggt gactcccggc
     6781 gttttcgccg gcctgcgctg gaccgttgca ggcgccgtcc tgttgctgat cttgcgattg
     6841 cgaggtgaac gagtcaggcc gccattgcgc ttcgttccgc gtttggcgtt tgtctcggtg
     6901 ctgctgatca cattgaatca ggtaatccaa ctctacggcc tgaaatacat taccgctggg
     6961 cttgcagcag taatcagttc tgcattgacg ccaatctcgc tgctcgggtt cgcggtcgcc
     7021 tttggtcagg aacgcttcac aaaacgtcag gtcgctgccc tggccacagg agccattggc
     7081 gtgtgcactc tgttcggacc atccgccttc gccgggacct tgcatttgtc cgaggtcgga
     7141 ggcgcacttg gcgtcaccat cggctgtctt tgctacacgg cggggtccgt tatgacgcag
     7201 ccgatgatgc ggtatttcgg agccgtgcaa ctcgcgggcc tgaccgacat ggtcgggggc
     7261 atgattctgt tggtcgcttc gctggtcctg gaacccggcg cctggacgtc gatcacgttg
     7321 cactggggat ggccggcatt cctggcgtgg ttgtatttgc ttgtgccagg cgcgttgctg
     7381 tcgacaacga tgtacttcct tctggtccgc gattggggag caagcaaacc tggcctgtac
     7441 gcatttattt ccccggttat cgccgtcgtg ctcggcgcct ggctgttcgg cgagcatctc
     7501 gactggggcg atgccgtcgg catggcgctg atgctcggcg ctgccggcct tgcgctgcgg
     7561 cgagtcgaag tggcagcttg acctgatggc gaccttccgg ttcctgcatt gcgcggacct
     7621 gcatttggat agtccgttac gcgggctgga agccgatccc gatgcgcctg tggataaaat
     7681 ccgtggtgcg acccgggaag cattgcataa tctggtgaat ttcgcgatcg agcagcgtgt
     7741 ggattttgtt gtcgccgcag gtgatcttta cgatggcgac ctgcgggact ggcattccgg
     7801 ccattttctt accggggaaa tcacccgcct gaccaatgcc ggcattccgt tcattgcaat
     7861 tcgtggcaac cacgacgcgg aaagcgtcat cacccgctat ttgcggatgc cgaacgacaa
     7921 tgcgaggatg ctggatcacc gtcggcccga aacctggcgc ctgtctaacc tgccggtgtc
     7981 catccacggg caaagctttg ccaccaaggc cgttactgaa aatctcgccg cggcctatcc
     8041 ggcgcccgat cccgaccgct tcaatattgg cctgttgcat agttcggtgg gggaacgcga
     8101 gggccatgac acgtacgcct cctgctctgt cgagcagttg cataatcacg gctacgatta
     8161 ttgggcactc ggccatgtgc ataaacgaga cgttttggca cgcgacccct gggttgtgtt
     8221 tcccggcaac ctgcagggcc ggcacatccg cgaaacctcc gccaaaggcg cgacattggt
     8281 gaccgtcacc gacggcagaa tcgcacacga gccgcaacac attgcgttcg acaccgttcg
     8341 ttgggctcgc gtccatgtgg agttgacgga aaacgccgat gaggacgccg cgttgaccca
     8401 attacgcctg gcgctcgccg aagcgcttga gcaagccgaa gggcgattgc tggcggcgcg
     8461 gatcgagctg tccggcgcct gtctcgcaca cgacagtttc agcaaggacc tcggggccgc
     8521 gcgcgagaaa attcgtgacg ctgccatttc ggttgccggt cccgggatga tctggacgga
     8581 aacgatcaac attgcgacaa agccgcgaaa gctgccggaa cagcgggacg acgcaacggg
     8641 ccagttgatc ggtacgttgc aggcggccac cggggcagag gtggccgacg acgtgcgggc
     8701 ttatgccagc gtcatgctgg agaaatccaa tctcctgcgg caggcgctag gcgccgaaca
     8761 cgccgccaac gctgtggcga cggatactgg cctggtcgat gcagtagaac gtgcgcgcga
     8821 tatgctgctt gggctgttgg atgggtaacg gcgcatgcac ctaaccacgg tgaccctgca
     8881 gcgctatggc aattacgcct cggaacggat cctgttctgc gcccggccgg gagccgtaaa
     8941 cattctgcac gcacccaaca gtgccggcaa atccgtactg cgcaatgcca ttgccgacct
     9001 gttgtttggc attcacaacc agacaccgat ggatttccgc ttcggctatt ccggcatgcg
     9061 gattgcggcc gacatcgtcc ggccggggca gccgccgacg tcgttcagcc ggcgcaaaac
     9121 tcgaggcaat gtggtaaccg gcgccgatga tcaggcgctc gacccgggat ttttgcacgg
     9181 gatcctcgcc ggccgggacc gcaaactgct cgaacgcctg ttcgttctgg ataccgaagc
     9241 attgcgcgcg ggcgccgctg atctgctgca atcaggcggt gacgtagcca gtgccttgct
     9301 cgccgccgcc ggcggtatcc gccaggcccg cacgttgaaa caaacgttgg aacgcaagcg
     9361 cgacgacctc gcgcccgagc ggcggacggc gtcacgtccg ttctatcagg cactcgacag
     9421 ctttaccgat gcacgccgcc gcagtggtgc agaaacgttg cggcccgagg catggtttcg
     9481 ccagcaacag gaactcgaag acctggaagc caacaggcgc cgctacaaca gcgaagccga
     9541 ggcggcatca acggagattg cccgtctgca acggatccgg cgcgtgcggc ggtggctaac
     9601 gcaatggacc gatgcaacag cctggctcgc agcccacccg gacgcccctc gactgggcct
     9661 ggagattcgt cgcttgctgg aacaggcgag gctcgatgtc gcgatgaggc aggaggcggg
     9721 ccggcttgct cgcgatacgc tggaacgggc tgaacagaac gccgacgatg taacggtcaa
     9781 tgttgaactg ctggcgcacg cggcgcagat acagcaactc gtcgaagatg cgggtggcgc
     9841 ccgcacggac agcaatgatc ttccgggccg ccaggtggaa cgtgatgtct cgctggctcg
     9901 tttacggact ctgttggttc aactcggttc cgatcttccc ccggaacgcg ccgccgaggc
     9961 attgccgaca cgggcattgc tcgcacgcac gcggcaacgg atcaaggacc aggcgggact
    10021 tgccgccgcg
//
LOCUS       DATAVD010000994         5800 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1024474, whole genome shotgun sequence.
ACCESSION   DATAVD010000994 DATAVD010000000
VERSION     DATAVD010000994.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5800
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1024474"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..476
                     /locus_tag="VHX39_19045"
     CDS             <1..476
                     /locus_tag="VHX39_19045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3993275.1"
                     /translation="ERLVDDGHCRSIGLSDVNLEKLQDIVALARIKPAVVQVESHPYL
                     PEWELLDYCRDQGIVLLAFAALGHSMNPRLLDDPVITTIAQRLHKTPGQVALAWAVQR
                     GTAFLTTSTSPHHIQENFDIDALPDDAMQEMRDRITTNIRFNTVVQTGVPGFIPR"
     gene            473..2221
                     /locus_tag="VHX39_19050"
     CDS             473..2221
                     /locus_tag="VHX39_19050"
                     /EC_number="2.8.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC and FAD-binding oxidoreductase
                     domain-containing protein"
                     /protein_id="HEX3993276.1"
                     /translation="MTGVVVSVNVGLPQNVAWQGRTVRTGVWKAPVKGRVFARRLNLD
                     GDGQGDLRGHGGEQRAILLYQLESYRYWSKYFARQDLVPGNFGENLTVDGLADNEVCI
                     GDRFRIGGAVVEVSQPRDTCYRVGIRLNQPEIAALLVAHHRPGFYCRVIQEGEIGAGD
                     RIEKLSDGPERMTVAEIDALLYSAEHPPEALRRAVRIPALSLDWQGSMQALLTAAEAG
                     GTTGNAGLGLGASAPLAWRGFRPAVVVASRQESVDVRSFEFANEDGSPLPASLPGQHI
                     LVRMRPDPDAPSVTRSYSLCGPPEASTYRIAVKNEHGLASGFLHQSVQAGSRLEISAP
                     RGSFTLVAGATPVVLISAGVGVTPMLAMLHAAAARPLWWLHAVRDRAHQSFAGEADDL
                     LAALPASRRCVTYSRPAPEDRPAQDFDRTGHLSPELLHELGVPQDADFYLCGPLGFLE
                     DFQKGLAAWGVPWPRVHAEVFGPTPTLTPGISADAVTLPHRPDGPVGGGPLVTFLRSG
                     LTVPWDSRFRSLLDLAEACAVPVRWSCRTGVCHNCESGLVEGELAYAPEPLDPPAEGN
                     ALICCSAPKTAVALDL"
     gene            2244..3620
                     /locus_tag="VHX39_19055"
     CDS             2244..3620
                     /locus_tag="VHX39_19055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-containing oxidoreductase"
                     /protein_id="HEX3993277.1"
                     /translation="MTEYDAIIIGTGQAGPPLARRMAGMGMRVAVIERGRFGGTCINT
                     GCTPTKTLVASAYAAHMARRGADFGFSAGDITVDMKRVKARKDYVVGLSNHGVERSLK
                     SLENCKVYEAHAQFVSPREVQAGSEILTSDRIFINVGARASVPDIPGLDQVDYLTNSS
                     MMDIDFLPRHLLVLGGSYIALEFGQMYRRFGSEVSIVQRGPRLVSREDPDVSAAITDI
                     LTREGITVRPGAKCLRVEKQGDDIVMTVDCDGASELRGSHLLVATGRRPNTGDLGLDR
                     AGVKQDEHGYIVVDDELRSSVPGIWALGDCNGKGAFTHTSWNDYEIVAANLFDGESRR
                     VSDRIPAYALYIDPPLARVGMSEAEVRKTGRPALIAKLAMEDVSRAFEKSETEGFMKI
                     LVDSETKQILGATFLGCSGDEAIHCVLDTMYAKAPYTVLRNAMHIHPTVAEFIPSMLE
                     DLAALGSE"
     gene            3948..5150
                     /locus_tag="VHX39_19060"
     CDS             3948..5150
                     /locus_tag="VHX39_19060"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX3993278.1"
                     /translation="MRAATCVRPFDNVVVLDLTRVLAGPYAAMMLADYGADVIKIETP
                     DSGDDSRAFGPFVGKESAYFMSLNRGKRSMTLNLKCPEAVALFKEMVRKADVLLENYR
                     PGTMEKFGLGYDVLKQINPGLIFASCSGFGQTGPYMKKPAYDVIVQGMGGLMSITGQE
                     DGEPTKAGASIGDIAAGLFTMIGVATALYTRERTGHGQMVDVAMLDCQVAILENAIAR
                     YVTSGVAPGPVGNRHSSITPFDTFKASDGYIIIAVGNDKLWGNFCRLVGRPELVEDER
                     FQHNSGRTKHQKQLKAILNQIFPAQTVQEWIEALDGAGIPCGPLNTIDRLLEDPQVKA
                     REMIVDVTHPVAGHLRMPGLPIKLSDTPGEVFRPAPMLGQHTGEILAELFGFDAARVA
                     ALRAGNVI"
     gene            5216..>5800
                     /locus_tag="VHX39_19065"
     CDS             5216..>5800
                     /locus_tag="VHX39_19065"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3993279.1"
                     /translation="MSFLSARPLVGVAPPGFVSVAPPDKQLLWAQRWKALGFIALVGF
                     VLSANYTNHGPLVPTLVRQLSITMAMAGLFTTAVFFTHGLLQIPGGIFSDKIGAKRVI
                     TFGIMIIAIGNILTGLSDSYAAILMWKFVTGIGTGCAIVGGLRYVPTFFAGKEIQLAQ
                     GVYGASILLGSGFVIYGVPQLLSALGWHGVFFSTG"
BASE COUNT         1075 a         1686 c         1824 g         1215 t
ORIGIN      
        1 tggagcgtct ggttgacgac ggtcattgcc ggtcgatcgg cctgtcggat gttaatttgg
       61 aaaaactgca ggacatcgtt gcgttggcgc ggatcaagcc ggcggtggtg caggtcgaat
      121 cgcatccgta tcttccagaa tgggagctgc tcgattactg ccgggatcag ggaattgtgt
      181 tgctggcgtt tgccgccctc ggccacagca tgaacccaag gctgctggat gacccggtaa
      241 tcaccaccat tgcacagcgc cttcacaaaa caccaggtca ggtcgccctc gcctgggccg
      301 tgcaacgtgg caccgcgttt ctgaccacct cgacctcgcc gcaccatatc caggagaact
      361 ttgacatcga cgccctgccg gacgatgcca tgcaggaaat gcgtgaccgc atcacgacaa
      421 acatccggtt caacacggtg gtgcagaccg gcgtgcctgg gtttattccc cgatgaccgg
      481 cgtggtcgtt tcggtgaatg tcggactgcc gcagaacgtc gcgtggcagg gcaggacggt
      541 tcggaccggg gtctggaagg cgccggtgaa ggggcgggtt ttcgcccgcc ggcttaacct
      601 cgatggcgac ggccaaggcg atctgcgcgg ccacggcggc gagcaacgcg cgattttgct
      661 gtaccagctt gagtcatacc ggtactggtc gaagtatttt gcgcggcagg atctcgtccc
      721 gggaaatttc ggcgagaacc tcaccgtcga tggcctcgcc gataacgagg tctgcatcgg
      781 cgatcgtttc aggatcggcg gtgcggtcgt tgaggtcagc cagccacgcg acacctgcta
      841 tcgggtcggc atccgattga accaaccgga gatcgccgcg ttgctggttg cgcaccaccg
      901 gcccggcttt tactgccgcg tcatccagga aggcgagatc ggcgccggcg atcgcatcga
      961 gaaactctcc gatggccccg agcgcatgac ggtcgcagag atcgatgcgc tgctttattc
     1021 agccgagcac ccgcccgaag cattgcgccg agcggttcgc attccggcac tcagccttga
     1081 ctggcaaggt tcgatgcagg cgctgctcac cgccgccgag gcgggaggca caaccggcaa
     1141 tgccggtctc ggactgggcg cgtcggcgcc gcttgcgtgg cgaggttttc gtccggctgt
     1201 ggtcgttgcg tcgcgccagg aaagcgtgga cgttcgatcg ttcgagttcg ctaacgaaga
     1261 tggttcgccg ctgccagctt cattacccgg tcagcacatc ctggtccgca tgcggccgga
     1321 cccggatgcg ccgtccgtca cacggagcta ttcgctgtgc ggtccacccg aggccagcac
     1381 gtatcggatt gccgtcaaga acgagcatgg cctcgcaagc ggttttctcc atcaaagcgt
     1441 ccaggcaggc agtcggctgg agatcagcgc gccacgtggt tcgttcacgc tcgttgcagg
     1501 tgcaacccct gtcgttctga tcagtgccgg cgttggcgta acaccaatgt tggcaatgtt
     1561 gcatgccgcg gcggcacggc cgctttggtg gctgcatgcc gtccgcgatc gcgcgcacca
     1621 gtcgttcgcc ggggaggctg acgatctgct cgcggcactc cctgcatccc gtcgctgcgt
     1681 tacctacagt cggcctgcgc cggaagatcg gcccgcacag gacttcgatc ggacaggcca
     1741 tctttcgcct gagttgctgc atgaacttgg ggttcctcag gatgccgatt tctatctgtg
     1801 cggcccgctt ggtttcctgg aagatttcca gaaaggcctg gcggcatggg gcgttccctg
     1861 gccaagggtc cacgccgagg tgtttgggcc cacgcccact ctcacgcccg gcatttctgc
     1921 cgatgccgta acgttaccac accgtcctga cggtccggtg ggcggcgggc cgttggtgac
     1981 gttcttgcga agcgggctta ccgtgccttg ggattcgcgc ttccgcagcc tgctcgacct
     2041 ggcggaggcc tgcgccgttc ccgtgcgttg gtcctgccga accggcgtgt gccataactg
     2101 cgagagcggc ctcgttgaag gcgaactcgc ctacgcgccg gaaccgttgg atccgccggc
     2161 cgaaggcaat gcgctgatct gctgctcagc gccaaaaacc gccgttgcgc ttgacctgta
     2221 agcccatcgc gcaggagtag aaaatgaccg aatatgacgc gattatcatt ggcaccggtc
     2281 aggcggggcc tccgctggcg cggcgcatgg cggggatggg catgcgggtc gccgttatcg
     2341 aacgcggccg tttcggtggc acttgcatca acacaggctg cacgccgacg aagacgttgg
     2401 tcgccagtgc atatgccgct cacatggcgc gccgcggtgc tgattttggc ttcagcgccg
     2461 gcgacatcac ggtcgatatg aagcgcgtca aagcgcgcaa ggattatgtc gtcggactgt
     2521 ccaatcacgg ggtcgagcgg tcgcttaaaa gtcttgagaa ttgcaaggtc tatgaagcac
     2581 atgcgcagtt cgtgtcaccg cgcgaggtgc aggccggcag cgagatcctg acgtcggacc
     2641 ggattttcat caatgtcggt gcgcgtgctt cggtgcctga catccccggc ctcgatcagg
     2701 tcgattatct caccaacagt tcgatgatgg acatcgactt tctgccgcgc cacctgctgg
     2761 tactgggcgg cagctacatc gctttggaat tcggccaaat gtatcggcgg tttggcagcg
     2821 aggtcagtat tgtgcagcgc gggcctcgcc tggtttcgcg cgaggatcca gacgtgtcgg
     2881 cggcgatcac cgatatcctg acgcgggagg ggattactgt ccgcccaggg gcgaaatgtt
     2941 tgcgggtcga gaagcaaggt gacgatattg taatgactgt cgattgcgac ggtgcatcgg
     3001 aattgcgagg ctcgcacttg cttgttgcga ccgggagacg ccccaataca ggtgatctcg
     3061 gtctcgaccg agcgggtgtt aagcaagacg aacacggcta tatcgtcgtc gacgatgaac
     3121 tgcgtagctc ggttcccggc atttgggctc tgggcgattg caatggcaaa ggcgcattta
     3181 cgcacacgtc gtggaatgat tacgaaatcg tcgcagccaa tctgttcgat ggcgaaagca
     3241 ggcgggtgag cgaccggatt cccgcctatg cgctctacat cgatccaccg ttggcgcgtg
     3301 tcggcatgtc cgaggcggag gttcgcaaaa ccggccgtcc cgcgctgatc gccaaactcg
     3361 ccatggagga tgtgtcccgc gccttcgaaa aatccgagac cgagggcttc atgaagatcc
     3421 tcgtggattc tgaaacgaaa caaatactgg gcgcaacgtt tctgggctgc agcggggatg
     3481 aggcgattca ttgtgtcctc gacaccatgt atgcgaaggc accctacacg gtgctcagga
     3541 atgcgatgca tattcacccg acggtcgcag aattcattcc ctcgatgctc gaggatcttg
     3601 ctgcgttagg atccgagtaa acggttctat gaggccccga taacaacgtg tagccatttt
     3661 tagggcgttt gagcatttcg acgcacaggc tacacgtaac tggtgggtga ttttttacgg
     3721 cgtggccagg gacctgccgc gaaatcggtg accgccaatc tcacagtcca cgcctggata
     3781 tgcacgggcg agcatcgctg ccctgtttcg ccgtcatcgg caaatccctg cgacgttaac
     3841 ggttcattaa acttcatggt ttatgaacga tttgtccgat gaggatcgcg gtgacgcaac
     3901 ggggtccgcg ccgcaaacgg ttttgaattt cccaggagat ggatgccatg cgtgccgcga
     3961 catgcgttcg gccgttcgac aatgttgtcg tgctcgatct gaccagggtg ctggccggtc
     4021 cgtacgctgc aatgatgctc gccgattacg gcgccgacgt gatcaagatc gaaacgccgg
     4081 acagcggcga cgactcgcgt gccttcggcc cgttcgtcgg caaggaaagc gcttatttca
     4141 tgagcctcaa ccggggcaag cgttcaatga ccttgaacct caagtgtccg gaggcggtcg
     4201 ctttgttcaa ggaaatggtc cggaaagccg atgtgctgct cgagaactac cgacctggca
     4261 cgatggagaa atttggcctc ggatacgacg tcctgaagca gatcaatcct gggctgattt
     4321 tcgcatcgtg ctcggggttc ggccaaaccg gtccgtacat gaagaagcct gcgtacgacg
     4381 tgatcgtcca gggcatgggc gggctgatga gcattaccgg gcaggaggac ggtgaaccga
     4441 ccaaggcagg cgcctcgatc ggtgatattg ccgccggttt gttcaccatg atcggcgttg
     4501 ccacggcgct ctacacgcgg gagcgcaccg gtcacggcca gatggtggat gtcgcaatgc
     4561 tcgactgtca ggttgccatt ctggagaatg ccattgcccg atatgtgacc tcgggcgtag
     4621 cgccggggcc ggtcggcaat cggcattcct cgatcacgcc gttcgacacg ttcaaggcga
     4681 gcgacggcta catcattatc gcggtcggca acgacaaact ttggggcaac ttctgccggc
     4741 tggtcggtcg ccctgaactg gtcgaagacg agcggttcca acacaattcc gggcgcacga
     4801 agcaccaaaa gcagctcaag gcgatcctca accagatatt tccagcccag acggtgcagg
     4861 agtggatcga ggcgctggac ggtgcgggaa ttccttgcgg gccactcaac acgatcgacc
     4921 ggctgctgga agatccgcag gtgaaagcac gcgagatgat cgtcgacgtc acccatccgg
     4981 tggcggggca tctgcgcatg ccgggtctgc cgatcaagct ctccgatacg cccggcgaag
     5041 tattccgccc agcacccatg cttggccagc acaccggcga gatccttgct gaattgttcg
     5101 gtttcgacgc cgcacgggtc gccgcgttgc gagcaggcaa cgtgatctga ccaccgtgac
     5161 cgaatgccgt tctgtctcgg tgagtggttg actacaacag aaagagagta aagccatgtc
     5221 cttcctatcc gcccggccgc tggtcggagt ggcgccgccg ggttttgtat cggtggcgcc
     5281 accagataaa caactcctgt gggcgcagcg ctggaaggcg ctcggtttca ttgcgctggt
     5341 ggggtttgtg ctgtcggcga actataccaa ccacggccca ttggtgccga ctctggtcag
     5401 gcaattgtca atcaccatgg cgatggccgg cctgttcacc acggcagtgt tcttcaccca
     5461 cggattgttg cagatcccgg gtggtatctt ctcggataag attggtgcca agcgggtcat
     5521 cacattcggc atcatgatca ttgccatcgg caatatcctc accgggcttt cggactccta
     5581 tgccgcaatt ctgatgtgga agttcgtcac cggcatcggc actggctgtg cgatcgtggg
     5641 cggcctgcgc tatgtgccga cgttctttgc cggcaaagaa atccagttgg cccagggtgt
     5701 ttatggcgca tcgattttgt tgggttcggg gtttgtgatt tatggcgtgc cgcaattgct
     5761 gtccgcactt ggctggcatg gcgtgttctt ctcgaccgga
//
LOCUS       DATAVD010000995         4131 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2326460, whole genome shotgun sequence.
ACCESSION   DATAVD010000995 DATAVD010000000
VERSION     DATAVD010000995.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4131
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2326460"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(201..1067)
                     /gene="gluQRS"
                     /locus_tag="VHX39_19070"
     CDS             complement(201..1067)
                     /gene="gluQRS"
                     /locus_tag="VHX39_19070"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HEX3993280.1"
                     /translation="MSIVTRFAPSPTGYLHVGHAFSALLAWRRARIGEGRFLLRLEDI
                     DPVRCRPEFATAILEDLAWPGIDWDGHVRVQSDHLGDYAAVLDNLRARGLIYPCFCSR
                     ADIQRHVIAAAPHGPDGGPVYPGTCRNLSAAERTARADQPHALRLDMQRALIPGLTFE
                     EEGEGMIVADPARFGDVVLARKDTPTSYHLCVTHDDALQGVTLVTRAEDLKPATHLHR
                     LLQALMGWPTPLYAHHGLLTDSAGRRLAKRDRAVTLRALRAAGAKPEELRDRLQSGSA
                     EAVAAWMTEVTG"
     gene            1267..1914
                     /locus_tag="VHX39_19075"
     CDS             1267..1914
                     /locus_tag="VHX39_19075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX3993281.1"
                     /translation="MPDLDAVHWGPASKGTPKQLVVLCHGLGADAYDLVDLAPVWADA
                     APDALFASVNAPDEHYSGFGRQRWAVSDRRPEVMVEGVRRAARLLNAFVDAELARLGL
                     APDACALMGFSQGAMTVLFAGLRRPVAPRAILAFSGALIAPETLSTELQNKAPVLLVH
                     GEADGQVPVHRSRDAEAALTAAGVPVEALYVSKLGHGIDDSGIAMGAQALQRAFT"
     gene            2085..2645
                     /locus_tag="VHX39_19080"
     CDS             2085..2645
                     /locus_tag="VHX39_19080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014457162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEX3993282.1"
                     /translation="MPDGGFHFPALVLNADFRPLSYFPLSLWSWQDAIKAVFMDRVSV
                     LSEYETEVRSPSVTMRLPSVIALKEYIPSARRPAFTRFNVFLRDAFHCQYCGERRPTP
                     DLTFDHVIPRSRGGRTTWENVVTACGGCNLRKGSRLPKECRMFPRLAPRQPTTWELQD
                     NGRAFPPNYLHEDWRDYLYWDSELDS"
     gene            complement(2681..>4131)
                     /locus_tag="VHX39_19085"
     CDS             complement(2681..>4131)
                     /locus_tag="VHX39_19085"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3993283.1"
                     /translation="IGSLGQQSAMFDLLIRRDPRDSGKTIVPDLAQSWDIAKDGSTYT
                     FHLRQGVLFHDGAELTSADIKATYDRISKPPSGISIPRSILFKTVSEITAPDKYTVQF
                     KLSSPRPVNFMMSAFASGWNVIFRQKTLEDNNYNLRKIMDIPGTGPFKSKRRVENEVW
                     VMEANKDYWNKGLPMLDGIEFYNLIPFSTELGSSILAGRVDYARICDPVTARKAKATP
                     GMSVAQFNQSVIQAAYLNNAKKPFDDPRVRRALHLAFDRPTLVDAVKDITPMRVGGFI
                     YPFSEFATPPAQMSQRLGYQEDTTAALKEAKALWAAAGAADSVKSLDFMVRDVASFKV
                     WAQAIQAMLQEGLGVQCNLRTVVESVWFDDTASGHYDMAIGAVVSTLLDPSDYFNAWY
                     RTGGPQNYSKWGEPKFDALVDQVDTEVDPAKRLALIRQCEDIMEADPPVLPVAWENIL
                     DIYYNYVKGHNPKDYFGIYDCDRYDTFWIDKT"
BASE COUNT          750 a         1300 c         1289 g          792 t
ORIGIN      
        1 cgatgagcct gaacttgtcc ggcataccga taggcaccgt attgggcggg gtgttggtgg
       61 catggtcgcc gcggtccgct tttctcgccg ccggcctggc ttctctgctt ggtgcactgg
      121 cattgcacgt gctgattcca gccgacgacg aacgctcgag tcggtgactg ccagttcaac
      181 tgaccaacac ggtgatgcga tcaaccggtg acctcggtca tccaggctgc caccgcctct
      241 gcggagcctg actgcaatcg atcacgaagt tcctccggct tcgcgccggc cgcgcgcaac
      301 gcccgcaacg tcacggcccg gtctcgcttg gcgagcctcc ggccagcgct atcagtcagc
      361 agcccatgat gcgcgtagag cggcgttggc cagcccatca acgcttgcag caaccggtgc
      421 aaatgggtcg ccggcttcag atcttcggcg cgcgtcacca aggtcacgcc ttgcagcgca
      481 tcgtcgtgcg tgacgcaaag atggtagctg gtgggcgtat cttttcgtgc cagcacgaca
      541 tcgccgaagc gagcgggatc ggcgacgatc atgccttcgc cctcctcctc aaacgtcagg
      601 cccgggatca gagcgcgttg catgtccaga cgcagcgcat gcggctggtc tgctcgggcg
      661 gtgcgttccg ccgccgacag atttcggcaa gtgccgggat acaccggtcc gccatccgga
      721 ccgtgcggag ccgcggcgat cacgtgccgc tggatgtcgg cgcgggagca gaagcacgga
      781 taaatcagcc ccctcgcccg caaattgtcc agaacagcgg cataatcgcc gagatggtct
      841 gattgcacgc gcacatgacc gtcccagtcg atgcctggcc acgccaggtc ctccaggatc
      901 gcagttgcga attccggccg gcagcgcacc gggtcgatat cctccaaccg cagcaaaaag
      961 cgcccttccc cgatccgcgc gcgacgccac gcaagcaacg ccgaaaaagc gtgccccaca
     1021 tgcaaatacc ccgtcggact gggcgcaaat cgcgtaacga tggacatcgc caggggttat
     1081 ctcacgcgcc gggcggtcag cgccaccatc aggccggcac gccattgcgc ctccggcgag
     1141 ggcttgaccc ggggatcggg actggcaacg tggcgcgaga gacaatgcgg ccaggctcgg
     1201 gccggacgat gttgggttga tcaacgcacg gggcacggac tgaaaccaaa gcaacaggag
     1261 cgcatcatgc cggacttgga cgccgtgcac tggggacccg cctcaaaggg aacgcccaaa
     1321 caactggtgg tgctgtgcca cgggctcggc gccgatgctt acgacctcgt cgatctcgcc
     1381 ccggtctggg ctgatgccgc cccggacgcg ctgttcgcct cggtgaacgc gccggacgaa
     1441 cactactcgg ggtttggccg ccagcggtgg gcggtgagcg accgtcggcc cgaggtcatg
     1501 gtcgaaggcg tccgccgcgc tgcccggctg ctgaacgcgt tcgtcgatgc cgaactggcc
     1561 cggcttggcc tggcgccgga tgcctgtgct ctgatggggt tcagccaggg tgcgatgacc
     1621 gtgctgttcg ccggccttcg gcgtccggtc gctccgcggg cgatcctggc gttctccggc
     1681 gccctgattg cgccggagac gctgtcgacc gaactgcaaa acaaagcacc cgtgctgctg
     1741 gtgcatggtg aggccgatgg tcaggttccc gtccaccgct cccgcgacgc cgaggcggcc
     1801 ctgactgcgg ccggggtgcc ggtcgaagcc ctgtatgtct cgaagctggg tcacgggatc
     1861 gatgattcag gcatcgcgat gggagcccag gcgttgcaac gggcatttac atgacgaagc
     1921 catgaaaccc ggacagggcc gagtcgctct ggttgcggcg actcctgtgc tctgccctaa
     1981 gccgtacggg tgtaagcctg tggatagatt ggcggcgcgg caatggacgg gtcgacgttc
     2041 catgaccctg cccgggccgg cgcccggacg caaagggtcg ctccgtgcct gacggcggat
     2101 ttcactttcc cgcgctggtg ttgaacgcgg attttcgtcc gctctcgtat tttccactgt
     2161 cgctgtggtc atggcaggat gcgatcaagg ccgtgttcat ggaccgcgtc tcggtgctga
     2221 gcgaatacga gaccgaggtc cgctcgccca gtgtgacgat gcggttgcca agcgtgatcg
     2281 cgttgaaaga gtatattccg tcggcgcgcc ggccggcgtt tactcggttc aacgtgtttc
     2341 tgcgcgacgc ctttcattgc cagtactgcg gggagaggcg gccgactccg gatctgacgt
     2401 tcgaccacgt gattccgcgc agccggggcg gccgcacgac atgggaaaac gtggtgaccg
     2461 cgtgcggcgg gtgcaatctg cggaaggggt cacggttgcc caaagaatgc cggatgttcc
     2521 cacggctggc tccacggcag ccgacaacgt gggaattgca ggacaacgga cgggcgtttc
     2581 cgccgaacta tctgcatgaa gactggcgcg attacttgta ctgggacagc gagctggaca
     2641 gttagcgcgg ccgagggttt gtgcccccgg ccgtctcacc tcacgtcttg tcgatccaga
     2701 acgtatcgta gcggtcacaa tcataaatcc cgaaataatc cttcggatta tgacccttca
     2761 cgtagttgta gtagatatcc aggatattct cccacgccac cggcaacacc ggcgggtcgg
     2821 cttccataat gtcctcgcac tgacggatca gcgccagacg ctttgcggga tcaacctcgg
     2881 tgtcgacctg atccaccagc gcatcgaact tcggctcgcc ccacttcgag taattctgtg
     2941 ggccgccggt acggtaccat gcgttgaaat aatccgacgg atcgagcaat gtcgaaacca
     3001 ccgcgccgat cgccatgtcg taatgacccg acgccgtgtc atcgaaccac accgactcca
     3061 caaccgttcg tagattgcac tgaacgccga ggccttcctg caacatggcc tggatcgcct
     3121 gcgcccagac tttgaagctg gcaacatcgc gtaccatgaa gtccaggctt ttgaccgaat
     3181 ccgcggcccc cgctgcagcc cacagcgcct tcgcttcctt aagcgccgca gtggtatctt
     3241 cctgatagcc gaggcgctgg ctcatctggg ctggcggcgt ggcaaattcc gagaacggat
     3301 agatgaaacc accgacccgc atcggcgtga tgtccttcac cgcatcgacc agggtcggcc
     3361 ggtcgaatgc aaggtgcaat gcgcgccgta cccgtggatc gtcaaacggc ttcttcgcgt
     3421 tgttcagata ggccgcctga atgacgctct gattgaactg cgcgaccgac atcccgggtg
     3481 ttgccttggc ttttcgcgcc gtcaccggat cgcagatgcg cgcgtaatcc acccggccgg
     3541 ccaggatcga cgaaccaagc tcggtcgaaa acgggatgag gttgtagaat tcgatgccgt
     3601 ccagcatcgg caggcctttg ttccaataat ccttgttggc ctccatcacc cagacctcgt
     3661 tctcgacgcg ccgtttcgat ttgaacgggc cggtgccggg gatatccatg attttgcgca
     3721 gattgtaatt attgtcctcc agcgtcttct gccggaagat cacgttccag ccgctggcga
     3781 acgccgacat catgaagttg accggccgcg gcgacgacaa tttgaattgc acggtgtatt
     3841 tgtcgggcgc agtgatttcg ctgacggtct tgaacaggat gctgcgcgga atgctgatcc
     3901 cactgggcgg tttcgagatg cggtcatacg tggccttgat gtccgccgat gtcagttcgg
     3961 caccgtcatg gaacagcacg ccctgacgta aatggaacgt ataggtcgaa ccgtccttgg
     4021 cgatgtccca gctctgcgcc agatcgggaa cgatcgtttt gccgctgtct cgagggtcgc
     4081 gccggatcag caggtcgaac atggcggatt gctgaccaag actgccgatg g
//
LOCUS       DATAVD010000996         4819 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3071584, whole genome shotgun sequence.
ACCESSION   DATAVD010000996 DATAVD010000000
VERSION     DATAVD010000996.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4819
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3071584"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..892
                     /locus_tag="VHX39_19090"
     CDS             <1..892
                     /locus_tag="VHX39_19090"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3993284.1"
                     /translation="GASITELGPFDRQMEDKQAVWEDGVRCVLPMFKDGGWEYDGPYF
                     KFPLRNVLPKPIQKPHPPLWVACSQLETIEMAGRCGIGALGFQFLSAEMAHAWVHAYY
                     NSFTRRQQKLADYQGNCNIAMVSYFMCAETDEEARRRADGVTFFQFSLAWYSGSRNRE
                     RPPPGTVNLWDEYEKWKHENPELAHKALTGGLIGSPETIRRKLRRFEASHVDQIILLN
                     QAGKNKHEHICESLELFAKEVMPEFVGHEADHQAWKQSVLNGTTVLEDIDTTPYKDRA
                     GVGKGVAISKLAQVGAEAAD"
     gene            complement(865..2913)
                     /locus_tag="VHX39_19095"
     CDS             complement(865..2913)
                     /locus_tag="VHX39_19095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX3993285.1"
                     /translation="MSFTIGIDVGGTFTDIVVTGSDGRTIIAKATTTPADQSDGVLDG
                     IALAAQQLGLTAATLLGETSRIVHGTTVATNALLEGKTAPVGLLTTEGHRDVIEMREG
                     LKPDRYNLRMAPPEPLVTRQLRLPVRERMRPDGSVAIALDKASLDQAIARLAEANVRA
                     VAICFLHAWRNPAHELQAAAAVRARLQDAYVTTSSDVLPRIKEFERFSTTVANAAVGP
                     VIDSYLHRLRDRLAEAAYRGELLVILSHGGVATVAEATRLAAGTALSGPAGGVAAAVA
                     LSREGVAKDLIAFDMGGTSTDIALVRDGQPTLSDGKTVANARIALPCLDIVTLGAGGG
                     SIGRIDAAGLLAVGPQSAGADPGPACYGQGGTEPTVTDANLVLGYLDAANFLGGRRTL
                     QRDAATKAVQRLADRLGLSLAEAAGGIHRLVNTRMADGVRVATVRRGVDPRGHALLAF
                     GGAAGLHVTAVAGELGMQRVVVPIAASVLSAWGMLNTDLRVELTRGQSQTGGIDVESL
                     YAAFADMEQEGRARLAWFDGEILVRHTADMRYGEQVFEINVPLDGIAQTREAIEDAFH
                     AAHERLYTYALRDQDVVLVNAGVSVIGRLPAAPVAVSGAASLPASPKSGRQVFLGGWT
                     EVPVYDFAALAPDQTIIGPAIVESDTTTVLLRNKETARFDPRGWLDISLGQSAASAPT
                     "
     gene            complement(2910..3875)
                     /locus_tag="VHX39_19100"
     CDS             complement(2910..3875)
                     /locus_tag="VHX39_19100"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-alpha-hydroxyglycine alpha-amidating
                     lyase family protein"
                     /protein_id="HEX3993286.1"
                     /translation="MTITIGSGEHTYSPQENWAKLPDGWEFGDVAAVGVDRWDRVYCF
                     NRGPHPMVVLDREGNFLKSWGEDIFHRAHGVHMAPDDTVWLTDDGDSTVRHCTLDGKV
                     LLEIGIPNKPAPYMSGIPFNRCTHTALSPSGDLYISDGYGNSRVHKYAPNGKLLFSWG
                     TPGTLPGEFNIAHNICCDADGWVYVADRENHRVQVFDGNGKFETQWNNLHRPSGLFMT
                     GGACPLCFIGEIGPHLAVNLDLPNIGPRLSILDLKGNLVARVQADPARGGGPGQFISP
                     HGLAVDSHGDIYVGEVAQSSWVRSFPKAPVPKHIRCLQKLVKVAA"
     gene            complement(3872..>4819)
                     /locus_tag="VHX39_19105"
     CDS             complement(3872..>4819)
                     /locus_tag="VHX39_19105"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX3993287.1"
                     /translation="EAVLDDDGFGKTDIVIRAQVTKQGSEVTVDLSESDPQVTGFINS
                     SHANTQSAVAIAFAFLLDPDITKNDGAFRPLKVVLKEGTIVWAREGAPVTMCTSHCCN
                     EIIEAIVVALSQACPERAMGGWGRRLRIALNGVDPRTGRRFIWHMFQARPGGGGSSVG
                     DGFSTIGEWHSAGGIKFGSIEVAESRFPLVFETHEYRPGSAGDGQFRGGYGGDMRLRV
                     ETAGTAMANTAGEGVVHGARGMLGGHDGVPHDYTLLPPEGPPRKLKSKEINVPVPTGS
                     VIHVLSGGGGGWGNPARRDPAARADDAAKGLIKSEETLS"
BASE COUNT         1004 a         1555 c         1408 g          852 t
ORIGIN      
        1 gggcgccagt atcaccgaac tggggccgtt cgaccgccag atggaggaca agcaggctgt
       61 ttgggaggac ggtgtccgct gcgtgctgcc gatgttcaag gatggcggct gggaatatga
      121 cggcccatac ttcaagttcc cgttgcgcaa cgtgttgccg aagccgatcc agaagccgca
      181 cccaccctta tgggtcgcct gctcgcaact cgaaaccatt gaaatggccg ggcgttgcgg
      241 gatcggcgcg ctcgggttcc agttcctcag cgcggaaatg gcccatgcgt gggtgcatgc
      301 ttattacaac agttttaccc ggcggcagca gaaactggct gactaccagg gcaactgcaa
      361 catcgccatg gtcagctatt tcatgtgcgc agaaaccgac gaggaagccc gccggcgcgc
      421 tgacggcgtg acgttcttcc agttctccct ggcctggtac agcggttcgc gcaaccgcga
      481 gcgtccgccg ccgggaaccg tgaacctgtg ggacgaatat gaaaaatgga agcacgagaa
      541 cccggagctg gcgcataagg cgctgaccgg cggcctgatc gggtcgccgg aaacaattcg
      601 gcgaaaactg cggcggttcg aggcctcgca tgtcgaccag atcattctgc tgaaccaggc
      661 cgggaagaat aaacacgaac acatttgcga aagcctggaa ctgttcgcca aggaggtcat
      721 gcccgagttc gtcggccatg aagcagacca tcaggcctgg aagcaaagtg tcctgaacgg
      781 cacgaccgtg ctcgaggaca tcgatacgac tccgtataaa gaccgcgccg gggtcggcaa
      841 aggtgtcgcc atttcaaaat tggctcaggt gggcgccgag gcagctgact gacccagcga
      901 aatatccaac caaccgcgcg ggtcgaaccg cgcggtttct ttatttcgga gcagcaccgt
      961 tgtcgtgtcg gactcgacga tggcgggccc aatgatggtt tggtcgggtg ccagggcggc
     1021 aaagtcgtag accggaacct cggtccagcc gcccagaaag acctgccgcc cagactttgg
     1081 tgaagccggc agcgaggcgg cgccagacac ggcaaccggc gcggcgggca gccggccaat
     1141 caccgacacg cccgcgttga ccagcacaac atcttgatca cgcaacgcat aggtatagag
     1201 ccgttcgtgc gcagcatgga aagcgtcttc aattgcctcg cgcgtttggg ctataccgtc
     1261 gagcggcacg ttgatttcga atacctgctc gccatagcgc atgtcggcgg tgtgacggac
     1321 cagaatttcg ccgtcgaacc aggccagccg cgcgcgcccc tcttgttcca tgtcagcaaa
     1381 cgcagcgtac agactttcga cgtcgatgcc accggtctgg ctttggccac gcgtcagttc
     1441 gacccgcaga tctgtgttca gcatgcccca cgccgatagc accgaggcgg caatcggcac
     1501 gacaactcgt tgcataccca gttcgccggc gacagcggtg acatgcaggc cggctgcgcc
     1561 gccaaaggcg agcaacgcat ggccgcgcgg atcgaccccg cggcggaccg tggcgactcg
     1621 caccccatcg gccatgcgcg tgttgaccag gcgatggatg ccaccagcgg cttccgccag
     1681 ggacagacca agacggtcgg cgagccgctg gacagccttg gtcgccgcat cgcgctgcaa
     1741 cgtgcggcgg ccaccaagga aattcgccgc atcgagatag ccaagcacca gattggcatc
     1801 cgtaacggtt ggctcggtgc caccctggcc gtaacaggcc ggaccgggat ccgctccggc
     1861 gctttgtggg ccaaccgcca gcaaaccggc ggcatcgatc cggccgatcg agccaccgcc
     1921 cgcacctaaa gtcacgatat ccagacacgg caaagcgata cgcgcattcg ccaccgtttt
     1981 gccgtcggac aaagtcggct gcccatcgcg aaccagcgcg atatcggtgg aggtgccgcc
     2041 catgtcaaaa gcgatcaggt cttttgccac gccctctcgc gataaggcca cagcagcggc
     2101 cacacctccg gcggggccgg acaaagccgt tccagccgcc agacgggttg cctccgccac
     2161 agtggcgacc ccgccgtgcg acaagatgac cagcaactcg ccgcggtacg ccgcctcggc
     2221 cagacgatcg cgcagtcgat gcaaatagct atcgatgacc gggccgaccg cagcatttgc
     2281 cacagtcgtt gaaaaccgtt cgaactcctt gatccgcggc aacacgtcgg acgacgtggt
     2341 cacataggca tcctgcaacc gcgcacgaac ggctgcggcg gcctgcaatt cgtgcgccgg
     2401 attgcgccac gcatgtaaaa agcagatcgc gaccgctcgc acgtttgcct cggccagacg
     2461 ggcgatggcc tggtcgagcg acgctttgtc caacgcgatc gccaccgatc catcaggccg
     2521 catccgttcc cgaaccggca accgaagctg tcgcgtcacg agcggctcag gcggtgccat
     2581 gcgcagattg tagcgatcgg gcttcaaacc ttcgcgcatt tcaatgacgt cgcgatgacc
     2641 ctcggtggtc agcaacccga ccggcgcggt cttaccctcc aacaatgcgt tggtggcaac
     2701 ggtcgtgccg tgcacgatgc gagacgtctc gcccaataat gttgcggcgg taaggccaag
     2761 ctgttgcgcc gccaaagcga tcccgtccag cacgccgtcg gattgatccg ccggggttgt
     2821 tgtcgccttc gcgatgattg tcctgccatc ggaaccagta acaacgatat cggtgaatgt
     2881 gccaccgaca tcgatgccga tcgtaaagct catgccgcga ccttgaccag tttctgcagg
     2941 caacgaatat gtttcggtac cggtgccttc ggaaaagatc gcacccagga cgattgcgcg
     3001 acctcaccga cataaatatc gccgtgcgag tccacggcaa ggccgtgcgg tgaaatgaac
     3061 tggccgggac caccgccacg cgccggatcg gcctggacac gggcgaccag attgcctttc
     3121 aggtcaagga tggaaagccg cggcccgata ttcggcaaat cgagattgac tgccagatgc
     3181 ggtccgatct caccaatgaa acacagcgga catgctccgc cggtcatgaa caatccactc
     3241 ggacggtgca gattgttcca ctgggtttca aatttgccgt tgccgtcgaa cacctgaacg
     3301 cggtgatttt cgcgatccgc aacatagacc cagccatcgg catcgcaaca aatattgtgt
     3361 gcaatgttga attcaccggg caacgttcct ggcgtgcccc aggaaaacaa caatttcccg
     3421 ttcggagcgt atttatgcac ccgggaattt ccgtagccat ccgagatata cagatctcca
     3481 ctcggcgaca gcgcagtatg cgtacaccga ttgaacggaa tgccgctcat ataaggtgcc
     3541 ggtttgttcg gaataccgat ttccagcaac actttgccgt cgagcgtgca atgccgcacg
     3601 gtggagtcac cgtcatcggt caaccacacc gtatcatcgg gcgccatatg cacaccgtgg
     3661 gctcgatgaa agatatcctc gccccaggac ttcagaaaat tgccctcgcg gtcgagcacg
     3721 accatcggat gcgggccgcg attgaagcaa taaacccggt cccagcggtc gaccccaacg
     3781 gcggcgacat caccgaattc ccaaccgtcc ggaagcttcg cccaattttc ctgcgggctg
     3841 taggtgtgct cgccagagcc gatggtgatg gtcatgacag ggtttcctcc gattttatca
     3901 ggcctttggc cgcatcgtcc gctcgggcag ccggatcgcg ccgcgccggg ttgccccagc
     3961 cgccaccgcc gccggacagt acgtggatga cgctgccggt gggcaccggc acattgattt
     4021 ccttgctttt caattttcgc ggcggacctt ccggcggcag caacgtgtaa tcgtgtggca
     4081 cgccgtcgtg gccgccaagc atgccgcgag cgccatgcac gaccccttca ccggcggtat
     4141 tggccatcgc cgtgccggcg gtttcaactc gaagccgcat atcgccgccg tacccgccgc
     4201 ggaactgtcc atcgccggcc gagcctggcc gatattcatg ggtttcgaac accagcggaa
     4261 accggctttc cgccacctcg atcgagccga acttgatgcc accggcagaa tgccattcgc
     4321 caatggtcga gaacccatcc cccaccgagg atcctccgcc ccctgggcgg gcctggaaca
     4381 tgtgccaaat aaaacgacgg cccgttcgag ggtccacgcc attcagagca atgcgcaacc
     4441 gtctgcccca tccgcccatg gcacgctccg ggcacgcctg cgacagcgct accacgatcg
     4501 cctcaatgat ctcgttgcag caatgactgg tgcacatggt aaccggcgca ccctcacgcg
     4561 cccagacgat ggtcccctct ttaagcacga ctttcagcgg ccggaatgct ccatcgttct
     4621 tggtgatatc gggatcgagc agaaaggcaa aagcaatcgc cacggccgac tgcgtgttgg
     4681 catgcgaaga attgatgaaa ccggtcacct gcggatcgga ctcgctcaaa tcgaccgtga
     4741 cttcgcttcc ctgcttcgtc acctgggcgc gaatgacgat gtcggtcttg ccgaaaccgt
     4801 cgtcgtccag cacggcctc
//
LOCUS       DATAVD010000997         4712 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1396843, whole genome shotgun sequence.
ACCESSION   DATAVD010000997 DATAVD010000000
VERSION     DATAVD010000997.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4712
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1396843"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..198)
                     /locus_tag="VHX39_19110"
     CDS             complement(<1..198)
                     /locus_tag="VHX39_19110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX3993288.1"
                     /translation="MHLARFPRVKLFPAPTPLHRLDNLTPELGGPEIWIKRDDCTVVA
                     TGGNKVRKLEWLIGEARSQGAT"
     gene            321..1244
                     /gene="msrP"
                     /locus_tag="VHX39_19115"
     CDS             321..1244
                     /gene="msrP"
                     /locus_tag="VHX39_19115"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016667 - oxidoreductase activity, acting
                     on a sulfur group of donors [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HEX3993289.1"
                     /translation="MRIIRRRGWEIAESLVTPEAAVLNRRSLLRGTAAILAAPAVALP
                     GLAHAAPNPKYPAGRPLTEEKYATTYNNYYEFSESKDLWQLAQKLKTSPWSIEFAGLV
                     KQPRKIALEDLLKQVAVEERIYRHRCVEAWAMTVPWTGFPMTELLRLAEPLGSAKYLA
                     FETDQDKSMEGLNEPLYPWPYVDGLAIDEAGNELAFITTGMYGKPLPPQNGGPIRMTT
                     PWKYGFKQVKSIIKVTFTEKRPRCFWQDINASEYGFWANVNPAVDHPRWSQAHERLLG
                     SNETVPTQIYNGYGDFVAGLYSNRKSEKLFM"
     gene            1241..1549
                     /locus_tag="VHX39_19120"
     CDS             1241..1549
                     /locus_tag="VHX39_19120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993290.1"
                     /translation="MNAQRILAVVAAILFVGSVGLATVGPEMVSLGAVLSYLSATAET
                     DLHHWLVRVIGPWVWDYVASPLLIRPAWLPLGSMGLICAGVALSLPAHDATRRSHRRS
                     "
     gene            complement(1668..2807)
                     /locus_tag="VHX39_19125"
     CDS             complement(1668..2807)
                     /locus_tag="VHX39_19125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3993291.1"
                     /translation="MDFDLSDEQRLLKESVDRLVLDQYQFQHRKQYMAEPAGFSAAMW
                     SRFAEQGLLGLPFAETLGGFGGGAVETMIVAEAFGRGLVVEPYFATVILAGGLLRRAA
                     DATLTASLVAQITAGTLKLAFGHVERHSRYDLANVTTTARKDGAEYVLNGAKSVVLHG
                     DAADKILLTARIAGAPRDRGGIGLFMVDAGAPGLARRGYPTQDGLRAAELTLDGVRAA
                     ALSDDALPLIEHAVDEAIAALCAEAVGTMQAMHELTLEYLKTRKQFGRPIGSFQVLQH
                     RSVDMLVALEQARSMAMFAAVMAAEENPVERRRAIAAAKVQIGRSGKHIGQEAIQLHG
                     GIGMTMEYSVGHYFKRMTMIDQLYGDADQHLAGLAQLGGLFGATP"
     gene            complement(2836..4032)
                     /locus_tag="VHX39_19130"
     CDS             complement(2836..4032)
                     /locus_tag="VHX39_19130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3993292.1"
                     /translation="MDLNFTADELAFRDEARHFFRTAIPETIRAKVAEGEGLTRDDMV
                     LSQRTLNQHGWATPNWPVEWGGKAWSPVQVYLYQDEMQQANVPSPIPFNVSMVGPVIA
                     QFGSEEIKQRFLPMTANADIFWCQGFSEPGSGSDLASLRTKAEPSGEKYVVNGQKIWT
                     TLAQYADWIFCLVRTDPAAKLQEGISFLLIDMKTPGITVRPIVTIDGGREVNEVFFDN
                     VEVPAENLVGQENKGWDYAKFLLGNERTGIARVGASKAKVARIKELAAIERSGDRPLI
                     DDPKFREKLAAVEIELKALEMTQLRVVADERKLAKGRQNPASSILKLKGSVIQQQLTE
                     LVMEVVGPYAMPYQRDFDGRNEPVIGPDYATEAAPMYFNYRKVSIYGGSNEIQRNIIA
                     KAILGL"
     gene            complement(4048..4596)
                     /gene="msrA"
                     /locus_tag="VHX39_19135"
     CDS             complement(4048..4596)
                     /gene="msrA"
                     /locus_tag="VHX39_19135"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEX3993293.1"
                     /translation="MSEEVATLGGGCFWCLEAVYKELRGVTAVMSGYAGGHVANPDYH
                     HVCQGTTGHAEVVQVKFDPDQLSYADLLRVFFAIHDPTTLNRQGNDAGTQYRSIILTH
                     SDAQKQTAVEVMKEITDANIWGRKLVTQIEPLTAFYPAEEEHHDYFARNPWSGYCPVV
                     VAPKVAKFRKQFTDRLRRDAAE"
BASE COUNT          846 a         1480 c         1442 g          944 t
ORIGIN      
        1 cgtcgcaccc tggctcctgg cttcaccgat gagccattcc agtttccgca ccttattgcc
       61 gccggtggcg accacggtgc agtcgtcacg cttgatccag atctccggcc cacccagttc
      121 cggggtgagg ttatccagtc gatgcagcgg agtcggcgcc gggaacagtt tgacacgggg
      181 gaagcgggcg aggtgcatgc ggtcgggtcc ttcttgcaac acggttggca cacaaaattg
      241 tcggcgcggg cgccgggcgg gtgtaatatt tttccggccg gcgcgtctga ggagcacgag
      301 accagaaaat ggagagtgtc atgcgtatca tcaggcggcg cggctgggaa atcgccgaga
      361 gtttggtcac accggaagcc gcggttctga accgccgctc gctgctgcga ggcaccgccg
      421 caatattggc agcgcccgct gttgccttgc cgggccttgc ccatgccgcg ccaaatccga
      481 aatatcccgc cggccggccg ctgaccgagg aaaaatacgc caccacctac aacaactatt
      541 acgaattcag tgagagcaag gatctctggc agttggcgca gaagctgaag accagcccgt
      601 ggtcgatcga gtttgccggt ctggtgaaac aaccgcgcaa aatcgccctg gaggatctgc
      661 tgaaacaggt cgccgtcgaa gaacgcatct accgtcaccg ctgcgtcgag gcctgggcca
      721 tgaccgtgcc ctggaccggc ttcccgatga ccgaattgtt aaggctggcg gaacctttgg
      781 gctcagcgaa gtatttggcg ttcgagaccg atcaggacaa aagcatggaa gggctgaacg
      841 aaccgttgta tccttggccc tacgtcgacg gactggcgat cgacgaggca gggaacgaac
      901 tggcgtttat cacgacggga atgtacggca agccattgcc gccccagaat ggcgggccaa
      961 tccgcatgac gacgccgtgg aaatatgggt tcaagcaggt gaaatcgatc atcaaggtga
     1021 cgttcactga aaagcggccg cgctgcttct ggcaggatat caacgccagc gagtatggct
     1081 tctgggccaa tgtgaacccc gccgtcgatc acccgcgctg gagccaggcg cacgaacggc
     1141 tgctcggatc gaatgagacc gtgccaaccc aaatctacaa tggttacggg gacttcgtcg
     1201 ccgggttgta ttccaaccgc aagtcagaga agttgttcat gtgaacgcgc aacgcatcct
     1261 ggctgtcgtg gctgccatcc tgttcgttgg ctcggtcggc cttgccacgg tcggacccga
     1321 aatggtcagc ctgggtgcgg ttttgtccta cctcagcgcc actgccgaga ccgacctgca
     1381 ccactggctg gtgcgggtca ttggcccctg ggtgtgggat tacgtcgcca gtccattgct
     1441 gattcgtccg gcctggctgc cgttgggctc gatgggcctg atttgtgccg gggtagcgct
     1501 gtcgttgccg gcgcatgatg cgaccaggcg atcccaccgg cgcagctgag ccgattcgct
     1561 gcaccacgat ccgtcatcct ccggcctggc ccgaggacct ccagccgcac tgactgcgcc
     1621 aattgccacg catccacccc accggtgtca ggtccttccg tcgcgcgtca cggcgtcgcg
     1681 ccgaacagcc cgccaagctg cgcgaggccg gccagatgct gatctgcatc gccgtacagc
     1741 tgatcgatca tggtcatgcg cttgaagtag tggccgaccg aatattccat cgtcatgccg
     1801 atcccaccgt gcagctggat ggcctcctgg ccgatatgct tgccggaacg gccgatctgg
     1861 accttggcag ccgcgatcgc acgcctgcgc tccaccgggt tttcctcagc agccatgact
     1921 gcggcgaaca tcgccatgct acgggcttgc tcgagcgcca ccagcatgtc gacggaccga
     1981 tgctgcagca cctggaacga gccgatcggt cgcccgaact gcttgcgggt cttgagatac
     2041 tccagcgtca gttcgtgcat cgcctgcatg gtgcccacgg cttcggcgca cagggctgcg
     2101 atggcctcat cgaccgcgtg ttcgatcaag ggcaaggcgt cgtcgctgag tgccgcggcc
     2161 cgcacaccat ccagcgtgag ttccgcggcg cgcaacccgt cctgggtcgg atagccgcgc
     2221 ctggcgaggc cgggggcacc cgcgtccacc atgaacagcc cgatcccgcc gcggtcccga
     2281 ggggcaccgg caatccgagc cgtgagcaag attttgtccg ccgcatcgcc atgcaaaacg
     2341 acgctcttgg caccattcag cacatactcg gcaccatcct tgcgcgccgt ggtcgtgaca
     2401 tttgcaaggt catagcgcga gtgccgctcg acatggccga acgcgagctt cagtgtaccc
     2461 gcagtgatct gcgccacgag tgacgcggtc agcgttgcgt cggcagcccg ccgcagcagc
     2521 ccgcctgcca ggatcactgt ggcaaaatac ggttcgacga ccaggccgcg gccgaatgcc
     2581 tcggctacga tcatggtttc gaccgcgccg ccgccaaagc cgcccagtgt ttccgcgaat
     2641 ggcaagccga gaagaccttg ctcggcgaag cgggaccaca tggcggcact gaacccggcg
     2701 ggttcggcca tgtattgctt gcgatgctgg aactgatatt ggtccaggac cagccggtcg
     2761 acgctttcct tcagcaggcg ctgctcatcg cttaaatcga agtccattgt ttcctcccgg
     2821 cggcgtcggt ctgggctaca accccaggat ggctttggcg atgatgttgc gctggatctc
     2881 gttggaaccg ccgtatatcg acactttccg atagttgaaa tacatcggcg ccgcttcggt
     2941 cgcgtagtcg gggccaatga ccggttcgtt gcggccgtcg aagtcccgct ggtacggcat
     3001 cgcgtaggga ccaacgacct ccatcaccag ttcggtcaat tgctgctgga tgacggaacc
     3061 tttcagtttc aagatggacg atgccgggtt ctgccggcct tttgccagtt tgcgttcatc
     3121 ggcaacgacc cgcagttggg tcatctccag tgccttcaac tcgatctcca ccgcggcgag
     3181 cttttcccga aacttcggat cgtcgatcaa tggccggtcg ccggaccgct cgatcgcggc
     3241 gagttccttg atgcgcgcca ctttcgcctt ggacgcgcca acccgggcga tgccggtgcg
     3301 ctcgttgcca agcaggaatt ttgcgtaatc ccagcctttg ttttcctgac ccacgagatt
     3361 ttctgcgggg acttccacgt tgtcgaagaa cacctcgttc acctcgcggc cgccgtcgat
     3421 ggtgacgatc gggcgcacgg tgatgccggg ggtcttcatg tcgatcaaca gaaacgagat
     3481 gccttcctgc agcttcgccg ccgggtcggt ccgcacgagg caaaagatcc agtcggcgta
     3541 ctgtgccaac gtggtccaga tcttctgccc attgacgacg tatttttctc cactgggctc
     3601 cgcctttgtg cgcaacgagg cgaggtcgga tcccgagccg ggttcggaaa atccctggca
     3661 ccagaaaata tccgcgttcg ccgtcatagg cagaaagcgc tgtttgattt cctcactgcc
     3721 gaattgcgcg atcaccggcc cgaccatcga cacgttgaac gggatcggcg agggcacgtt
     3781 ggcctgctgc atctcgtcct gatacaaata gacctgcacc ggcgaccacg ctttgccgcc
     3841 ccattcgacc ggccagttcg gcgtcgccca cccgtgctgg ttcaaggtgc gctggctgag
     3901 gaccatgtcg tcccgggtca gaccctcgcc ttccgccact ttggcgcgga tggtttccgg
     3961 gattgcggtg cggaagaagt gcctcgcctc gtcgcgaaac gccagttcgt cggcagtgaa
     4021 gttcaggtcc atgggacggt tcctcgatta ttccgccgcg tcgcgccgca gccggtcggt
     4081 gaactgcttg cggaatttcg cgacttttgg cgccaccacg accgggcagt aaccggacca
     4141 cggattgcgt gcgaagtaat cgtgatgctc ctcctccgcg ggatagaatg cggtcagcgg
     4201 ttcgatctgg gtcaccagtt tgcgacccca gatgttggcg tcggtgattt ccttcatcac
     4261 ttcgacggcc gtctgttttt gcgcatccga atgggtgagg atgatggaac gatattgcgt
     4321 tccggcatcg ttgccctgac ggttcagggt ggtgggatcg tggatcgcga aaaacacccg
     4381 cagcaaatcg gcatagctga gctggtcggg atcgaatttc acctgcacga cctcggcgtg
     4441 tccggtggtt ccctgacaga catggtgata gtccgggttg gcgacatggc cgccggcgta
     4501 accggacatg accgcagtga cgccccggag ttctttgtat acggcttcca ggcaccagaa
     4561 gcagccgccg cccagtgtcg cgacttcctc gctcatgtgt tgtctcctgt gttcaggttg
     4621 gcggcgagca tagccggacg ggctgccgca agccagcggc ggggtgttgc cccgaacccc
     4681 accaggggca ttggtccgct cttcgcggcc ca
//
LOCUS       DATAVD010000998         2389 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2142182, whole genome shotgun sequence.
ACCESSION   DATAVD010000998 DATAVD010000000
VERSION     DATAVD010000998.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2389
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2142182"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..455)
                     /locus_tag="VHX39_19140"
     CDS             complement(<1..455)
                     /locus_tag="VHX39_19140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HEX3993294.1"
                     /translation="MRSLLRSTAVRLAFGYAVLFIISSLLLAGFLWWRTALYLDREID
                     AVIVADGQAIADRLRDFGLPGAIDTINERVGRANDQRAIYLLTDPMLTPLAGNLQAWP
                     LAVRSAPGWYQINLVRDGNLHVTRVAFMLLPGGYRLLVGRDVEDRVEVRG"
     gene            complement(448..1128)
                     /locus_tag="VHX39_19145"
     CDS             complement(448..1128)
                     /locus_tag="VHX39_19145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3993295.1"
                     /translation="MKILLIEDNERMAGFLLKGLREQGHTVDHAGNGRDGLFLANSEP
                     YDAMILDRMLPAGVEGLAIVEALRKTGNKTPILILSALGEVDDRIRGLRAGGDDYLAK
                     PFAFGELVARLDALVRRARDVGPDPELVVGDLRMDPRSRMVTRAGKPIQLQPREFRLL
                     EYLLRHAGQVVTRTMLLENVWDYYFDPQTNVIDSHVSKLRRKIDADFDVPLLHTVRGA
                     GYKLATHA"
     gene            complement(1179..>2389)
                     /locus_tag="VHX39_19150"
     CDS             complement(1179..>2389)
                     /locus_tag="VHX39_19150"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: protein motif:HMM:TIGR02037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HEX3993296.1"
                     /translation="MDQMFRRFFDGQNRMHAEPTHALGSGFIIDPAGYVVTNNHVVDH
                     AHEIKVTLGDGKSYPAKVIGHDEKTDLALLKIDAGKPVPYIAFGDSDKERVGDWVVAV
                     GNPFGLGGTVTAGIVSGHDRDLNNGPYDDYLQIDAPINPGNSGGPLFNQSGQVIGIDT
                     AIYSPNGGSVGIGFAIPSNLATKVVAQLRDHGKVERGWLGIAMQPMTPALASAVGHPG
                     AEGVLVDKVMEDSPAQKAQLKQGDVITAFNGETIKGPRDLAVDVANVASGTSAKLTIW
                     RDGHESTVDVAIATQPNQTQVADDESSSAPVGMAFAPLNEDAQNQLGLNASVKGVVVA
                     RVQPGSRADESGVQPGDVIVRVGSDPVTSPAEAAAKIHAAEHDKKDAIPLLVMRDGTT
                     YYLALQLGKA"
BASE COUNT          457 a          764 c          700 g          468 t
ORIGIN      
        1 ccgcggacct cgacccgatc ctccacgtcg cgtcccacca gcaaacgata ccctccaggc
       61 aacagcatga acgccacacg ggtcacatgc aggttgccat cacgtaccag attgatttgg
      121 taccaacccg gcgcagatcg caccgcgagc ggccaggcct gtaggttgcc tgccagaggc
      181 gtcagcatcg gatcggtcaa cagataaatt gcgcgctggt cattggcgcg cccaactcgc
      241 tcgttgatgg tgtcaattgc acccggcaat ccaaaatccc gcaaccggtc ggcgattgcc
      301 tggccgtctg cgacgatcac ggcatcgatt tcccgatcca ggtaaagcgc ggttcgccac
      361 cacagaaatc cggccagcag cagtgacgaa atgatgaaca ggaccgcata accgaacgcc
      421 aggcggactg cggtcgaccg caacaggcta cgcatgcgtc gcgagcttgt accccgcacc
      481 tcgaacggtg tgcaacaagg gaacgtcgaa atccgcatcg atcttgcgtc gcagtttgct
      541 gacatgggaa tcgatcacat tggtttgtgg gtcgaaataa taatcccaga cattctccag
      601 cagcatcgtg cgagtgacca cctgcccggc atgccgcagc aaatattcca gcagcctgaa
      661 ttctctgggt tgcaactgaa tcggtttgcc ggcacgggtc accattcgcg atcttgggtc
      721 catgcgcaga tcgccgacaa ccagctccgg gtccggacca acgtcgcgcg cgcggcggac
      781 caaagcgtcc aaccgcgcca ccagttcgcc aaaggcaaat ggtttcgcga ggtaatcatc
      841 gccgcccgca cgcaaacccc ggatgcggtc gtcgacctcg ccaagcgcgc tcaggatcag
      901 gatcggggtt ttgttgcctg tcttgcgcag ggcttcgacg atcgcgaggc cctcaacgcc
      961 ggcgggcagc atgcggtcga ggatcatcgc gtcgtaaggt tccgaattcg caagaaaaag
     1021 tccgtcccgg ccgttgccgg cgtgatcgac cgtgtggcct tgctcgcgca gtcccttcag
     1081 caggaacccg gccatgcgct cattatcttc gatcaacaaa atcttcatgc gaatgaccgg
     1141 agtgcggacg gcggcacagg accgccgccc gcgttatctc acgccttgcc cagttgaagc
     1201 gcgagataat aggtggtgcc gtcccgcatg accagcaacg gaatggcatc ctttttgtcg
     1261 tgttcggcgg cgtgaatttt tgctgccgcc tcggccggcg aggtcaccgg atcactgccg
     1321 acccgcacga tcacgtcgcc tggctgcacg ccgctttcgt ccgcacggct gccgggttgc
     1381 acccgagcaa cgacaacgcc tttcaccgac gcattgagac cgagctggtt ctgcgcgtcc
     1441 tcattgagcg gggcgaacgc catgccaacc ggtgcgctgc tcgactcgtc gtccgcgacc
     1501 tgcgtctggt tgggttgggt ggcgattgcc acgtccacgg tgctctcgtg cccgtcacgc
     1561 cagatggtca gcttcgccga agtgccgctg gcgacgttgg caacatcgac cgccagatct
     1621 cgcgggcctt tgatcgtttc gccgttgaac gcggtgatga catcaccctg tttgagctgc
     1681 gctttctgcg ccggcgagtc ctccatcact ttgtcgacca gcacgccctc ggcgccgggg
     1741 tggcccaccg cactggcaag cgcaggtgtc atcggttgca tcgcaattcc cagccaaccg
     1801 cgttcgacct tgccgtgatc tcgcagttgt gcaacgacct tggtggcgag attcgatggg
     1861 atagcgaagc cgattccgac gctgccgcca ttgggcgaat agatcgcggt atcgatgccg
     1921 atcacctgac cggactgatt gaacagcgga ccacccgagt tgccgggatt gatcggggca
     1981 tcgatctgga ggtagtcgtc atacgggccg ttgttcagat cgcggtcgtg cccagaaacg
     2041 attccggcag ttaccgtgcc acccagtccg aacggattgc cgacggcgac gacccagtcg
     2101 ccaacacgct ctttgtcgct gtcgccgaac gcgatgtaag gcactggctt gccggcatcg
     2161 attttcagca gcgcgaggtc ggtcttttca tcgtgcccga tgaccttcgc cggatacgac
     2221 ttgccgtcgc ccaacgtcac cttgatctcg tgtgcgtgat cgacgacgtg attgttggtg
     2281 accacatagc ctgccggatc gatgatgaag ccggagccaa gcgcatgggt cggttccgcg
     2341 tgcatccggt tctggccgtc aaagaagcgg cggaacattt ggtccatct
//
LOCUS       DATAVD010000999         2932 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1213932, whole genome shotgun sequence.
ACCESSION   DATAVD010000999 DATAVD010000000
VERSION     DATAVD010000999.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2932
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1213932"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..345
                     /locus_tag="VHX39_19155"
     CDS             <1..345
                     /locus_tag="VHX39_19155"
                     /inference="COORDINATES: protein motif:HMM:NF025080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX3993297.1"
                     /translation="DSHYGRKEVMAWCEQNDITYIFGLASNKVLAEQVFPTLDACCVR
                     RALAQAEKVRDFTWTRYAAKSWSRARRVVARIEVTRKGADVRYVVTNIKGGRARYLYE
                     KVYCARGQAENR"
     gene            complement(398..2005)
                     /locus_tag="VHX39_19160"
     CDS             complement(398..2005)
                     /locus_tag="VHX39_19160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HEX3993298.1"
                     /translation="MLSPLDPAALPGNVTALRTLLLSREQEHAAELQAAREGLKEQVL
                     QNEQLKSRLAKLLRQRFGPSSEKMRGAIDQLELIIGDLEEEIAQTTPPEPEPEADPSA
                     IDPEIQPRRRKPKRKPLPENLPRDVVEHAPACACPKCGGALRRLGEDATEVLEYVPGS
                     FRVTRHVRPKMSCRRCESITQPPAPSLPINRGLAGPGLLAHVLVGKFCDHLPLHRQAE
                     IFARDGIDLDRSTLADWVGQCARLLRPLVDAVGAHVMAAERIHADDTTVPVLAPGNGK
                     TKTGRIWCYVRDDHPFAGKAPKAVLYCYSPDRKAEHPKAHLAGFKSILQADGYAGYAG
                     LYQQGVTEAACMAHVRRKFVDIHAETKSPQAWEAMQRIAALYAVEALIRGEPAEIRLK
                     VRAERSEKLFADLRKWLDTTLSRVSGRGDMAKAIRYALARWDALTLMLRDGRVCIDNN
                     AAERSMRPMTLGRKNWLFAGSDSGGERAAAIFTLTESAKLNWLDPEDYLRKVLTCIAD
                     HPVRRVHELLPWNLEGVRRRLDQRDAA"
     gene            complement(2071..2418)
                     /gene="tnpB"
                     /locus_tag="VHX39_19165"
     CDS             complement(2071..2418)
                     /gene="tnpB"
                     /locus_tag="VHX39_19165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017183759.1"
                     /note="TnpB, as the term is used for proteins encoded by
                     IS66 family insertion elements, is considered an accessory
                     protein, since TnpC, encoded by a neighboring gene, is a
                     DDE family transposase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HEX3993299.1"
                     /translation="MIAPPPNVHVWLACGHTDLRRGFDGLASLAQNHLSKDPFSGHLF
                     VYRGRRGDLIKMLWWDGQGLCLFAKRLERGRFVWPQAKDGAVFLTPAQLSMLLEGIDW
                     RMPARTWRPELAG"
     gene            complement(2415..2798)
                     /locus_tag="VHX39_19170"
     CDS             complement(2415..2798)
                     /locus_tag="VHX39_19170"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX3993300.1"
                     /translation="MIEIITGRERRRRWSVAEKLRIVAESQEAGARVCDVATRHDVSP
                     SLLHGWRYLARQGRLRSGDAIDFVPARLASSMNDVSAPQPTPPAPVGHGAAAIEVVLP
                     SGGKILIRRETPVAMLRAVIAGLRG"
BASE COUNT          538 a          958 c          902 g          534 t
ORIGIN      
        1 gatagccatt acgggcgcaa agaggtcatg gcatggtgcg agcagaacga catcacctat
       61 atctttggcc tggcgtccaa caaagttctg gcggaacagg tgttccccac actcgacgcc
      121 tgttgcgtcc gccgcgcgct cgcccaggcg gagaaagtgc gcgacttcac gtggacacgc
      181 tacgccgcga agtcctggtc acgggcgcga cgggtggtgg cgcggatcga ggtgacgcga
      241 aaaggcgccg acgtccgcta cgtcgtcacc aacatcaagg gcgggagagc ccgctatctt
      301 tatgaaaagg tctattgcgc gcgcggtcag gctgagaatc gttagcgtcc ggtctgccac
      361 gcggtagctt tggcgcgtga gttgcctggt atgccgctca ggcggcgtca cgctgatcca
      421 ggcgccggcg cacgccctcc aggttccacg gcaacaactc gtgcacgcgt ctgaccggat
      481 gatcagcgat acaagtgagg accttgcgca agtaatcctc gggatcgagc cagttcaatt
      541 ttgctgactc ggtcagggtg aagatcgccg cggcgcgctc gccgccggag tccgagcccg
      601 cgaataacca atttttgcgt ccaagagtca tcggccgcat cgagcgttcg gcggcgttgt
      661 tgtcgatgca gacgcggccg tcacgcagca tcagggtcaa tgcatcccaa cgcgccagag
      721 cgtaacggat cgccttcgcc atatcgcccc tgccggagac acgcgacagc gtcgtgtcca
      781 accatttccg gagatcggcg aacagtttct cactccgctc cgcgcggacc ttcagcctga
      841 tttcggcggg ttcgccgcgg atcaacgcct cgaccgcgta cagcgccgcg atccgttgca
      901 tggcctccca cgcctgaggc gattttgtct cggcgtggat gtcgacgaat ttcctccgaa
      961 cgtgcgccat gcaggcggct tccgtgacgc cttgctgata cagtccggcg taaccggcgt
     1021 acccgtccgc ctggaggatg cttttgaatc cggcgagatg ggctttcgga tgttccgctt
     1081 tgcgatccgg actgtagcaa tacagcaccg ccttcggagc cttgccggcg aacggatggt
     1141 cgtcgcggac ataacaccag atccgtccgg tttttgtctt gccgtttccg ggtgccagca
     1201 ccggcaccgt ggtgtcatcg gcgtggatcc gttccgccgc catcacgtgt gcgccgaccg
     1261 cgtcgaccag cggacgtaac aaccgcgcgc actgaccgac ccaatccgcc agtgttgaac
     1321 gatcgagatc gataccatcc cgggcaaaaa tctccgcctg gcgatgcaac ggaaggtggt
     1381 cacagaattt cccaaccagc acgtgcgcca acaaaccagg gccggcgagg ccgcggttga
     1441 tcggcagact gggagcgggg ggctgggtga tgctctcgca gcgacggcag gacattttcg
     1501 gacgcacgtg ccgggtgacg cggaaagatc ccggcacgta ttccagcact tcggtcgcat
     1561 cttcgccgag acggcgcaac gcgccgccgc atttcgggca ggcacaggcg ggagcatgct
     1621 ctaccacgtc gcgcggcagg ttttccggca gcggcttgcg tttcggtttg cgccgccggg
     1681 gctggatttc cggatcaatc gcggaagggt ccgcctcagg ctccggttcg ggcggcgtgg
     1741 tctgcgcgat ctcttcctcg agatcgccga tgatcagttc gagctgatca atcgcgcctc
     1801 gcatcttttc cgatgatggc ccgaaccgct gacgcaacag tttcgcgagg cgggacttca
     1861 actgctcgtt ctggagcact tgctccttca ggccttctcg ggcggcttgc agttccgccg
     1921 catgctcctg ctcgcggctc aacagcaacg tccgcaacgc ggttacgttg cctggaagcg
     1981 cggcggggtc cagcggcgaa agcatgcgcg aatcttccac gaacgattcc cggttcgcca
     2041 ggccaaatcg caccaccgta acgactttct tcatcccgcg agttcgggac gccaggtgcg
     2101 cgccggcatc cgccaatcga taccctccag caacatcgac agttgcgccg gcgtcagaaa
     2161 gaccgcgcca tctttggcct ggggccaaac gaagcggcct ctctcgagcc tcttcgcgaa
     2221 caggcaaagg ccctgcccgt cccaccacaa catcttgatc aggtcaccgc ggcggccgcg
     2281 gtacacaaac aagtgaccgc tgaaaggatc cttggaaaga tggttctggg ccagagaggc
     2341 gaggccatca aaaccgcggc gcagatcggt atgcccgcac gccagccaga cgtgcacgtt
     2401 cggcggcggc gcgatcatcc acgcaacccg gcgatcacgg cacgcagcat cgcgacaggc
     2461 gtctcccggc ggatcagaat tttgccgccc gacggtagaa cgacctcaat cgccgccgcc
     2521 ccatgaccca ccggcgcggg cggagtgggt tgcggcgcgg aaacatcatt catggaggac
     2581 gccagccgcg ccggcacgaa gtcgatcgcg tcaccggatc tcaatcggcc ctgacgcgcg
     2641 aggtaccgcc aaccgtgcaa caggctcggg cttacgtcgt gtcgcgtcgc gacgtcgcaa
     2701 acgcgcgcgc cagcctcctg gctttcggct acgatccgca gcttctcagc gacgctccac
     2761 cggcggcggc gttcgcgacc ggtgatgatc tcgatcattc catccgccac agtccttaac
     2821 tccgaccttt aggtgctcct taaggtcata gtctcgggat caccggcggg tggaacaagg
     2881 cggggctgac cggacgttta ccaaggtgca gctcgccggt tttttgctca ag
//
LOCUS       DATAVD010001000         3404 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2516871, whole genome shotgun sequence.
ACCESSION   DATAVD010001000 DATAVD010000000
VERSION     DATAVD010001000.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3404
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2516871"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2178)
                     /locus_tag="VHX39_19175"
     CDS             complement(<1..2178)
                     /locus_tag="VHX39_19175"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3993301.1"
                     /translation="MARQPPGDRAAANTFENVAVPEPSQDFSAAADARTAAAEQQLTD
                     HHGKSGGYEILLLRDEIAHLIAERDELKTSHQRELRRIRGEEAAARESTALFYRNSMS
                     WRITAPLRAVKTMLQGRGFHIESPGVPVAQPGVQAIPTHGVIDSRGALRAILGNRLAA
                     FLAGSGSLALPQHQDPEVSIILVLHNQAELTFGCLSSIAECFGMRRAVEVVILDNASS
                     DATGDLLSRVTGARLITSSENLHFLRGVNHAVREARGRNILLLNNDAQILPGTVDAAL
                     RALGSDRNIGAVGGRIILPDGTLQEAGCILWNDGTATGYGRGHTPGEPEFDFRRDVDF
                     CSGAFLLTPREIFERLGGFDERYVPAYYEETDYCVRLHQAGLRVVFDPDVVVTHYEFG
                     SSASSEAALALQQRNHATFLDRHAEWLAQRPAPGRVLDGRSRPRGPRILVVDDRVPHV
                     RFGSGYPRARDMLHEFAKGGAEVTLFPMAPHREIRSQMRETLDIDIEVMVGHYNRTLR
                     SFLEDRRGHYDGIVVCRPHNMRDFRSAIGSDRTLLDYAVVIYDAEAIFSLREVLQRRV
                     SGFTVSDEAARRMMADEIALIGNVDAVLAVSEREKSLFEEHGVSAVQLLGYPIVLEPT
                     MSPFAAREGFIFVGAMPSDDSPNADSLRWFAAEVLPHLRREFGAELRLQVVGHCDARS
                     VAALDGDALDLLGPVEDLRPIFERARVMVAPTRFAAGIPHKVHQ"
     gene            complement(2337..>3404)
                     /locus_tag="VHX39_19180"
     CDS             complement(2337..>3404)
                     /locus_tag="VHX39_19180"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3993302.1"
                     /translation="ASRRAVREHLAARGVPVAVVPAPLAPNYNRVVWQVPEPAPLVSV
                     IIPTRDRIELLTSCLDGLLNRTNYPAIEVLIVDNDSRSPEALAYFTRIRADSRIRVIA
                     APGPFNYADLNNRAAAQASGEILVLLNNDIKVIDGGWLRELVSHAMRPDVGAVGAKLL
                     YADGRLQHGGIVLGVGGVAGHYRAGDRRNSVGSFGWLALTRTTSALTGACLAVRRSVY
                     AEVGGLDAQNLAIAFNDVDFCLRLQARGYRNIWTPAAELYHLESASRGLDLSGANVER
                     FRRETEVMLGRWDGALQSDPCWNPNLSLDNAHGVPAWPPRQEKVWKRGAPAASAGNGL
                     FDQPALSSCPENTEAGIPKVS"
BASE COUNT          735 a         1079 c          984 g          606 t
ORIGIN      
        1 ctgatgcacc ttgtgcggaa tcccggcggc gaaccgggtt ggcgccacca tgacccgcgc
       61 ccgctcgaag ataggccgaa ggtcttccac cggtccaagc aggtccagcg catccccatc
      121 gagggcggcg actgaccgag catcacagtg accgacaacc tgaagacgca gttccgcgcc
      181 gaattcgcga cgcaaatgcg gcaaaacctc ggcggcgaac cagcgcagac tatcggcatt
      241 cggcgagtcg tcggatggca tggctccgac aaagatgaac ccctcacgcg cagcgaaggg
      301 agacatcgtt ggctccagca cgatcggata accaagcaat tgcacggcgc tcacgccatg
      361 ctcttcaaac aacgactttt ctcgttcgga gaccgccagc acagcgtcta cgttcccgat
      421 caacgcgatc tcatccgcca tcattctcct ggcggcctcg tccgaaaccg tgaacccaga
      481 gacccggcgc tgcaaaacct cgcggaggga gaaaattgcc tcggcatcat aaatcacgac
      541 agcgtagtcc aggagtgtgc gatcactgcc aatagcgctg cgaaaatcgc gcatattgtg
      601 cgggcgacag accacaattc cgtcgtaatg cccgcggcga tcctcaagaa aactgcggag
      661 cgtgcggtta taatgaccaa ccatcacttc aatgtcgatg tcgagcgtct cccgcatctg
      721 tgaccggatc tcgcgatgcg gcgccattgg gaaaagcgtg acttctgccc ctcctttcgc
      781 gaactcgtgc agcatgtcgc gtgctcgcgg atagccggag ccaaatctga catgaggcac
      841 gcgatcatcg accacgagaa tgcgaggtcc gcgtgggcgt gacctgccat cgagcactcg
      901 acccggcgcg ggccgctgcg caagccattc agcatgacgg tcaagaaatg tggcgtgatt
      961 gcgctgttgc aacgcaagtg cggcctcgga gcttgccgaa ctgccaaatt cataatgcgt
     1021 gaccacaacg tcgggatcga agacgacgcg aagaccggcc tgatgaagcc gaacgcagta
     1081 gtccgtctct tcgtagtaag cgggaacata acgctcatcg aaaccgccca gacgctcgaa
     1141 tatctcacgt ggcgtgagca gaaacgcacc agagcagaaa tcaacgtccc gacggaaatc
     1201 aaactcgggc tcgcccggag tgtggccccg accgtagcct gtggcggtgc catcgttcca
     1261 caggatgcag ccggcttcct gcaaagttcc gtcgggcaga ataatgcggc cgccgaccgc
     1321 gccgatattg cggtcggaac cgagcgcgcg caaagcggcg tcgactgtgc ccggaagtat
     1381 ctgggcgtcg ttgttcagca gcagaatgtt tcgtccgcga gcctcgcgca cggcgtgatt
     1441 gacgccgcgc agaaagtgca ggttctccga acttgttatc aaccgggcac cggtcacgcg
     1501 cgaaagcaga tcgcctgtgg catcgctgga agcgttgtca agaatcacga cctcaacagc
     1561 ccgtcgcatg ccgaaacatt cagcgattga agacaagcac ccgaatgtga gttccgcctg
     1621 gttgtgaagc accagaataa tgctgacctc cgggtcctgg tgctgtggca gagcgagact
     1681 gccactgccc gcgagaaagg cagcaaggcg gttgcccaga atcgcacgca gcgcacccct
     1741 ggagtctatg acgccatgcg tcgggatcgc ctgcacgcct ggttgcgcga caggaacacc
     1801 cggagactca atatgaaaac cgcggccctg cagcatcgtc ttcaccgccc tcagtggtgc
     1861 tgtgatccgc caggacattg agttccggta aaatagcgct gtggattccc gagcggcggc
     1921 ttcctcgccg cgaattcgcc gtagctccct ctgatgactg gttttcagtt cgtcacgttc
     1981 cgcaatcagg tgcgcaatct catcgcgtag gagcaggatt tcgtaaccac ccgattttcc
     2041 gtgatgatcg gtcagttgct gttccgcagc ggcggttcgc gcatcggccg cagcggagaa
     2101 gtcctgggac ggctccggca cggcaacatt ttcaaatgta tttgccgccg cccgatcgcc
     2161 aggaggttgc cttgccatcg tttaatcacc tgctcggtct gcactgcggc atcttcagcc
     2221 cacacagggc cgaaggcaaa gtctacgagc gtccgcatgt gctgcgtttc ttggtgtgat
     2281 gtcaaccgga tacgaaaatg gttgcatcct ccaccgggat ctcggccccc ggacgttcat
     2341 gacacctttg ggatcccggc ctcggtgttt tccgggcagg atgataacgc cggctgatca
     2401 aacagaccgt tgccggctga tgcagccggc gcaccacgtt tccagacctt ctcctgccgt
     2461 ggcggccacg ccggcacgcc atgggcgttg tccaatgaaa ggttgggatt ccaacagggg
     2521 tcggattgca aagcgccgtc ccaacgcccg agcatgacct cggtttcccg acgaaaccgc
     2581 tcgacattcg cgcccgacaa atccaggcca cgcgaggcgg actcgagatg gtaaagctca
     2641 gccgccgggg tccagatgtt ccggtatcca cgcgcctgga gccgcaggca gaaatcgacg
     2701 tcattgaacg caattgccaa attctgcgca tccagaccac cgacctcagc ataaaccgag
     2761 cgacgaaccg cgaggcaggc gccggtcaga gcggacgtgg tacgggtcag cgcaagccat
     2821 ccgaacgacc ccacagagtt gcgacgatct cccgcccgat aatgcccagc gacgccgccg
     2881 acaccgagca cgatcccgcc gtgttgcagc cggccgtcgg catagagcag ctttgctccg
     2941 acagcaccca catcgggtcg catggcgtgg gacaccagct cccgcagcca gcctccgtcg
     3001 atcaccttga tatcattgtt cagcagcacc aaaatttcgc cactggcctg ggctgccgca
     3061 cgattgttca gatcggcata attaaatgga cccggtgccg cgatcacccg gatccgggag
     3121 tcggcccgga tccgggtgaa atacgccaga gcttccggtg acctgctgtc gttatcgaca
     3181 atcagtacct cgatcgccgg ataattggtt cggttgagca ggccatcgag acagcttgtc
     3241 agcaactcga tccggtcgcg tgtcggaata atgacggaga ccaacggcgc tggctcgggg
     3301 acttgccaga cgacccgatt gtagttcggc gccaacggtg ccggaacgac tgccaccggc
     3361 acaccacgtg ctgccaaatg ctcccgcacc gcgcgacggg atgc
//
LOCUS       DATAVD010001001         3054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3445951, whole genome shotgun sequence.
ACCESSION   DATAVD010001001 DATAVD010000000
VERSION     DATAVD010001001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3054
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3445951"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2493)
                     /locus_tag="VHX39_19185"
     CDS             complement(<1..2493)
                     /locus_tag="VHX39_19185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993303.1"
                     /translation="MSGHADLSDLPDDVAAAIAPHLDPPMELLVAIGVELAKKRDEAK
                     AERTQCGIEATWTECEEAYLGMDDANRHEFSEGRMQKPTSIEGPVTSGGIKITGNKST
                     VFLRLTSRYVDAGTAKLAEILLPPDDKSFAFNEMPVPELIAAKEDESQVVHSGLGVPL
                     TRPLAKGEAAAPAAAAPPPPMPPAPAAPPPTAAPAQPGAAPAPPGAPTPAGGAPAAAG
                     APAAAAGPPRVPLTVKDLAIEKIEKARKQAKAAETRVYDWMVQTRFRAEFRKLIGDAA
                     KLGVGVLKGPIPQKKRVMAITGEGDQLELVIKDTIVPATQRVSPWNIFPDPSCGENIH
                     DGDFIFERDFFSERKVRALKKLPGYIGSQIDLVLLEGPQKANVGNGEGQPKEKQKGRY
                     EIWYFHGCLSRQQMAVIDQAAGRTPRPAGDPAEEIYAIATMINDSVVRATINPLDSGG
                     FPYHSMPWQRREDHWAGVGVAEQIKAAQRVTNASLRALLNNAGKSAGSQFVIDRAGIE
                     PADEQWTITPDKIWYKTNDGPQDVRQAFMAVVIPNVTEQMMSIVTMGERFAEESTSIP
                     LITQGQSGATTPDTFGAAQLQNNNANQLLRSVGDAFDDYITEPLIRQYYEWLLLDPDV
                     PSEEKAEFQIDAHGSAALVERAIQDQTIGQMGNMAANPIYGINPKKWAKMFLKSKRLA
                     PDDVQYTEEEQAKLDATPPPEAPAVTVAKIGQDTAMKQLAAKQTAEQQGQQSEERIAQ
                     AANVLEGGHVQNDAARVQAEAQRTQVEATLKLHELQMRHDMALMEYANKMHISLAQAK
                     VDLAKTAMQLQTQRDLNAADNAIDLHKHRTQAP"
     gene            2614..>3054
                     /locus_tag="VHX39_19190"
     CDS             2614..>3054
                     /locus_tag="VHX39_19190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993304.1"
                     /translation="MTEPAASPQIARKIERFAPHVRVGLDAYRKALSMRQDWHVAVAA
                     AIDAAITAKEAALTLRLPLPFDCGGFGCGFQPCICPDDTTDEATMLSPVLKGWRAVQG
                     FAVLRLRVDVVGADRVPVRRAGDLVFATRPAGPYAKGWSIQKLPF"
BASE COUNT          411 a          964 c         1007 g          672 t
ORIGIN      
        1 tggtgcctgc gtccggtgct tgtgcaggtc gatcgcgttg tcggccgcat tcaggtcgcg
       61 ttgggtctgc aactgcatgg ccgtcttcgc caggtctacc ttggcttgcg ccaggctgat
      121 gtgcattttg ttggcatact ccatcagcgc catgtcgtga cgcatctgta gttcatgcag
      181 cttgagcgtg gcttcgacct gggtgcgctg cgcctcggcc tgcacacgcg ccgcgtcgtt
      241 ctggacatgg ccgccttcca gcacgttcgc cgcctgggcg atgcgttcct cggactgctg
      301 gccctgctgc tcggccgtct gcttggccgc gagctgcttc atggcggtat cctgcccgat
      361 cttggcgacg gtgacagcgg gcgcctccgg cggcggcgtg gcgtcgagct tggcctgttc
      421 ctcttcggtg tattgcacgt cgtccggcgc caggcgcttg gacttcagga acatcttggc
      481 ccattttttt gggttgatgc cgtagatcgg gttggccgcc atgttgccca tctggccgat
      541 cgtctgatcc tggatggcac gctcgaccag ggcggcggag ccatgcgcgt caatctggaa
      601 ctcggccttt tcctcactcg gaacgtcggg atcaagcaac agccactcgt agtactgccg
      661 gatcagcggc tcggtgatgt agtcgtcgaa cgcatcgcca acgctccgca gcagttggtt
      721 ggcgttgttg ttctggagtt gcgcggcgcc gaacgtgtcc ggtgtcgtcg cccctgactg
      781 gccttgggtg atcagcggga tcgaggttga ttcctcggcg aaccgctcgc ccatggtgac
      841 gatgctcatc atttgctcgg tgacgttcgg gatcaccacc gccatgaacg cctgccgcac
      901 atcctgcgga ccgtcgttgg tcttgtacca gattttgtcc ggcgtgatcg tccactgctc
      961 atcagccggc tcgattcccg cgcggtcgat cacgaactgg ctgcctgcgc ttttgccggc
     1021 attgttcagc agcgcgcgga gtgatgcgtt ggtgacccgc tgcgccgcct tgatttgctc
     1081 tgccacgccg acgccggccc agtgatcctc gcgtcgctgc catggcatcg aatggtaagg
     1141 gaaaccgccg ctgtccagcg ggttgatcgt ggcccgaacc acgctgtcat tgatcatcgt
     1201 cgcgatggca tagatttcct cggccgggtc gcccgctggc cgcggcgtcc tgccggcggc
     1261 ttggtcgatc accgccatct gctgcctgct caggcacccg tggaagtacc aaatctcgta
     1321 acgacccttc tgcttctcct tcggctggcc ctcgccgttg cctacgttgg ccttttgcgg
     1381 tccttccagc aacacaaggt cgatctgcga cccgatgtag cccggtagct tttttagggc
     1441 gcgcactttg cgttcagaga agaagtccct ctcgaatatg aagtcgccgt cgtggatatt
     1501 ctcgccgcac gatgggtcgg ggaatatgtt ccaaggcgac actcgttgtg tggccgggac
     1561 gatcgtgtcc ttgatgacca gttcaagttg gtcgccctcg ccagtgatcg ccatcacccg
     1621 ctttttctgc gggatcggcc ctttgaggac gcccacgccg agttttgcgg catcgcctat
     1681 cagcttgcga aactcggcgc ggaaccgggt ctgcaccatc cagtcgtaga ctcgcgtttc
     1741 ggccgccttg gcctgtttgc gggccttctc gattttttcg atcgccaggt ccttgacggt
     1801 caacggcacg cgtggcggtc ctgccgcggc ggccggtgcc ccagccgccg cgggcgcccc
     1861 acccgccggg gtcggtgccc ctggcggcgc gggcgccgct cccggttggg ctggcgcggc
     1921 cgtcggtggc ggcgcggccg gagccggggg catcggtggt ggcggagctg ctgccgccgg
     1981 agctgctgct tcgcctttcg ccagcggccg ggtcaacggg acacccaggc cactgtgaac
     2041 gacctggctc tcgtcctctt ttgccgcgat cagttcgggc actggcattt cgttgaacgc
     2101 gaacgatttg tcgtcgggcg gcaagaggat ttcggccagc tttgccgtgc cggcgtccac
     2161 ataccgcgac gtcagccgca ggaagaccgt ggacttgttg ccggtgatct tgatgccgcc
     2221 cgatgtgact ggcccctcga tcgaggtcgg cttctgcatc cggccttctg agaactcgtg
     2281 ccggttggca tcgtccatgc cgagataggc ttcctcgcac tcggtccagg tcgcctcaat
     2341 gccgcactgg gtgcgttccg ccttggcctc gtcgcgcttt ttggcaagct cgacgccgat
     2401 cgccaccaac aactccatcg gcgggtcgag atgcggcgcg atggccgcag cgacgtcgtc
     2461 tggcaggtcg gacaggtcgg cgtggccgct cattgggttt cggtggtcct attcggttta
     2521 caacgggagt tggccgggcc atcggtcgga acgagggaga tcgccgccat gcactggctg
     2581 atgacagacg gaataaaggt atggattgac gaaatgacgg agcctgccgc ttccccgcaa
     2641 atcgcccgga agatcgaacg ctttgcgccg catgtccgcg tcggcctgga tgcctaccga
     2701 aaggcgcttt ccatgcgcca ggactggcac gtcgcggtgg cggcggcgat cgacgccgcg
     2761 atcactgcca aggaggcggc gttgacgttg aggctcccgc tgccgttcga ctgcggcggc
     2821 ttcgggtgtg gtttccagcc gtgtatctgt cccgacgaca cgaccgacga ggcgaccatg
     2881 ctcagtccgg tgctgaaggg gtggcgcgcg gtgcaagggt tcgcggtgct tcggctgcgg
     2941 gtcgatgtgg tcggggccga cagggtgccg gtacgccggg cgggcgatct ggtgttcgcg
     3001 acgcggccgg ccgggccgta tgcaaagggt tggtcgatcc agaagctgcc gttc
//
LOCUS       DATAVD010001002         1775 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2327522, whole genome shotgun sequence.
ACCESSION   DATAVD010001002 DATAVD010000000
VERSION     DATAVD010001002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1775
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2327522"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(144..1544)
                     /locus_tag="VHX39_19195"
     CDS             complement(144..1544)
                     /locus_tag="VHX39_19195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX3993305.1"
                     /translation="MAHDILIVDDEPDIRMLIDGILADEGYETRGAEGSDAALAAFHA
                     RRPSLVVLDVWLQGSRLDGVGLLEMFHGEEPQVPVVMISGHGTIEMAVGAIQHGAYDF
                     IEKPFQSDRLLLVVRRALEAAALARENAELRLRAGPDLGLIGDSSCMGQLRSQVDKVA
                     PTGSRVLITGPAGSGKEVVARMIHANSRRADGPFIVMNCATMAPARFEEELFGVEAGA
                     DPAAQPRRAGVLERAHGGTLLLDEVADMPLETQGKIVRALQDQSFERVGGASRVKVDV
                     RVISTTNRDLQSEISNGRFREDLFYRLAVVPVRLPSLKERREDVPELARHFIARSAEA
                     SGMPLRDLSADALAALQAYDWPGNVRQLRNLMDWLMIMAPGGSVDAIRADMLPPEIGS
                     RAPQVLSIDPGADIMSLPLREARDLFETQYLQSQLLRFGGNISRTAQFVGMERSALHR
                     KLKQLGVTSADERVAN"
     gene            complement(1534..>1775)
                     /locus_tag="VHX39_19200"
     CDS             complement(1534..>1775)
                     /locus_tag="VHX39_19200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993306.1"
                     /translation="AIVKKIMEDHGGQVTLDDRPDGPGTVAALVWPSAAAVPEATGGK
                     AVTPQAGELVHAGIESQGIRNLSSGPHSAGTTHGA"
BASE COUNT          344 a          633 c          483 g          315 t
ORIGIN      
        1 cccgcactcc ctgggctgtt aaggttacgc tggacgaacg tcagatcaac ggccggggcg
       61 ctgccccgat catctcagtt taggccggat atgacgattt tccaaacccc ggcagagacg
      121 gaattgacgt tacgcagaca acctcaatta gcaacccgtt cgtccgccga ggtaacgccc
      181 agttgcttca actttcggtg gagggcgctg cgttccatac cgacgaattg cgccgtccgc
      241 gaaatattac cgccaaatcg taacaactgc gactgtaaat actgcgtttc gaacagatcc
      301 cgcgcctccc gcaacggcag cgacatgatg tcggcacccg gatcgatact caacacctgc
      361 ggcgcgcgcg agccaatttc cggcggcagc atatcggcgc ggatcgcgtc caccgaaccg
      421 ccgggcgcca tgatcatcag ccagtccatc agattgcgca gctgccgcac attgcccggc
      481 cagtcgtacg cctgcagcgc cgccagcgcg tcagccgaca agtcgcgcag gggcatgccg
      541 gacgcctcag ccgatcgcgc aatgaaatgg cgggcgagtt cgggcacatc ctcccgccgt
      601 tccttcagcg acggcagccg caccggcacc accgccagac ggtaaaacaa gtcctcgcgg
      661 aaccggccat tgctgatttc gctctgcaaa tcccggtttg ttgttgaaat tacccgtaca
      721 tcgaccttga cccggctcgc cccgcccacc cgctcaaaac tttggtcctg caaggcgcgg
      781 acaatcttac cctgagtttc cagcggcatg tccgccactt cgtccagcag cagcgtcccg
      841 ccgtgcgcgc gttccagcac gcccgctcgc cgcggctgcg ctgccggatc ggcgccagcc
      901 tcgacgccga acagttcctc ctcgaaccgc gccggcgcca tcgtcgcaca attcatgacg
      961 atgaacggcc cgtccgctcg ccgcgagttg gcgtggatca tccgcgccac gacttccttg
     1021 cccgatccgg ccggaccggt gatcaacacg cgcgatccgg tcggtgccac tttgtctacc
     1081 tggctgcgga gctgccccat gcaggacgaa tcgccgatca gcccgagatc aggcccggca
     1141 cgcaaacgca attcggcatt ttcacgggcc agcgccgccg cttccagcgc tcgccgcacc
     1201 accagcagca aacgatcgga ctgaaacggc ttttcgatga aatcgtaagc gccatgctgg
     1261 atcgcaccga ccgccatctc gatcgtgcca tggccggaaa tcatcaccac aggaacctgc
     1321 ggttcctcgc catggaacat ttccagcagg ccgaccccat cgagccgcga gccctgtagc
     1381 cagacatcca gcaccaccag tgacggtcgc cgcgcgtgga acgcggccag ggctgcatcc
     1441 gagccttctg caccccgggt ttcataaccc tcatccgcca ggatgccgtc gatcagcatc
     1501 ctaatgtccg gttcgtcatc gacgatcaga atgtcatgcg ccatgcgtgg tcccagctga
     1561 atggggtccc gaggataagt ttctgatccc ttgggactcg atgccggcat gcaccagttc
     1621 gccggcttgt ggcgtgaccg ctttcccgcc ggttgcctca gggacggcag cagcagacgg
     1681 ccataccaag gctgccaccg ttcccggccc gtcaggacga tcgtcgaggg tcacctgacc
     1741 accgtgatcc tccataatct tcttcacgat cgcga
//
LOCUS       DATAVD010001003         1680 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3257889, whole genome shotgun sequence.
ACCESSION   DATAVD010001003 DATAVD010000000
VERSION     DATAVD010001003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3257889"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            24..>1680
                     /locus_tag="VHX39_19205"
     CDS             24..>1680
                     /locus_tag="VHX39_19205"
                     /inference="COORDINATES: protein motif:HMM:NF013727.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsK/SpoIIIE domain-containing protein"
                     /protein_id="HEX3993307.1"
                     /translation="MKVAVFDFKGSALAHVIAGFPHTVAAMSNLRNDKLWITRMADVL
                     YGEMDRRKSRLDRAQVSDIAEYEYLRIHKKEKLPPMPHLLLVVDEFTQMFSESDEAKA
                     VMDEVARQGRSQGLRLIMGSQRLGHQMQGGIMSNVQVRIALRTVGDSDSREVLGTDEA
                     NHLPAKPAGAGLLRVGSSKKLTRFQTAFAMKSYVPPQQAASAAVRQEAGYVEPQEFHA
                     VGMPALQVQRNVIDDASVVEPQAIIGPDGRTVKQVQATIAALNRLGLPPLAPMWLPPL
                     EPLAVDELVRRLRGKPWDVDYGSFEEMLSVLRFPVGVEDRPFEHRQFVYAPNLADSNC
                     AVVGQGQAGKTVAVATMITGASLMYSPRRVQFYVIALSGPDLNVVETLPHVGGFAREV
                     DPEQVKRIIAEMLTLIEEREQAFSELRLTLSKLRERKFGKAAGPVPDDPFGDVYLVID
                     GWPTFVKNWENLVYDVERILAKGPDVGVHVIVSTNGWVASKFPSGMANRLTSNVELKL
                     DDTDDRGRNNLKVAKFVPFGDQQVYLDDDDAGGGEIEQLQVVKI"
BASE COUNT          323 a          470 c          579 g          308 t
ORIGIN      
        1 gcctgacgca ttcgccggaa tcgttgaagg tcgcggtgtt cgacttcaaa ggcagcgcac
       61 tggcgcatgt gatcgccgga ttcccgcaca ccgtcgctgc gatgagcaac ctgcgtaacg
      121 acaagctgtg gatcacgcgc atggccgatg tgctctacgg cgagatggac cgccgcaaga
      181 gccgattgga ccgcgcacag gtcagcgata tcgccgagta cgagtatctg cggattcaca
      241 aaaaggagaa gctgccgccg atgccgcacc ttctgctggt ggtggatgag ttcacgcaga
      301 tgttctccga aagcgacgaa gcgaaggctg tgatggatga ggttgcccgc cagggccgtt
      361 cgcaagggct gcggcttatt atgggttcgc agcggctggg tcatcagatg cagggcggca
      421 tcatgagtaa cgtccaggtc cgcatcgcgc tgcgcactgt cggtgattcc gattcacgcg
      481 aggtgctggg caccgatgag gccaaccatc tgccggctaa gcctgccggt gccgggctgc
      541 tgcgggtggg tagcagcaag aagctgacga ggtttcagac cgcgttcgcg atgaaaagct
      601 atgtgccgcc gcaacaagcg gcctcggccg cggtccgcca ggaggctggt tacgttgagc
      661 cgcaggagtt ccatgcggtc gggatgccgg cgttgcaggt gcagcgcaac gtcatcgatg
      721 acgcgtcggt ggtggagccg caggcgatca tcgggccgga cgggcgcact gtcaagcagg
      781 tgcaggcgac catcgcggcg ttgaaccggc tgggtctgcc gcccctggca ccgatgtggt
      841 tgccgccgtt ggagcccttg gctgtcgatg agcttgtccg ccggctgcgg ggcaagccgt
      901 gggacgtcga ctacggcagt ttcgaggaga tgctatcggt gctgcggttc ccagttggtg
      961 tggaggacag gccattcgag catcgccagt tcgtctacgc gcccaatctt gcggacagca
     1021 attgcgccgt ggtgggccag ggacaggccg ggaaaacagt cgcggtggcg acgatgatta
     1081 ccggtgcctc gctgatgtac agcccgcgcc gcgtgcagtt ctacgtgatt gcgttgagcg
     1141 gacccgacct caacgtcgtc gagacgttgc cccatgtcgg cgggtttgcc cgagaggtcg
     1201 accccgagca ggtcaaacgg atcatcgccg agatgctgac cctgatcgag gagcgcgagc
     1261 aagccttcag cgagctgcgg ctgaccttga gcaagttgcg tgaacgcaag ttcgggaagg
     1321 ccgcaggacc ggtgcccgat gaccctttcg gcgatgtcta cttggtgatc gacgggtggc
     1381 cgacattcgt gaagaactgg gagaacctgg tttacgacgt cgagcgaatt ttggccaagg
     1441 gccccgatgt cggggttcac gtgatcgtgt cgacgaacgg atgggtcgcc agcaagttcc
     1501 cctccggtat ggccaaccgg ttgacgagca atgtggaact caagctcgac gacaccgacg
     1561 acagaggcag aaacaacctc aaggtcgcca agttcgtgcc gttcggggat cagcaggtat
     1621 atctcgatga cgacgacgct ggcggcggcg agattgaaca actgcaggtg gtcaagatcc
//
LOCUS       DATAVD010001004         1783 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2142533, whole genome shotgun sequence.
ACCESSION   DATAVD010001004 DATAVD010000000
VERSION     DATAVD010001004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2142533"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1140)
                     /gene="selB"
                     /locus_tag="VHX39_19210"
     CDS             complement(<1..1140)
                     /gene="selB"
                     /locus_tag="VHX39_19210"
                     /inference="COORDINATES: protein motif:HMM:TIGR00475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HEX3993308.1"
                     /translation="MIIALAGHVDHGKTALIRALTGIDADRLPEEKRRGMTIDLGFAH
                     VRLPSGVQVGFVDVPGHERFLGNMLAGVLSIDTVLLVIAADDGPMPQTREHLSILRLT
                     GVADVTAVLSKIDRVDAVQRDAAHRAVRDVLDAAGFATAPVLEASSVTGDGIPSVLAA
                     IEANAAAHRARDASGGFRLAIDRSFSPAGAGLVVTGTVASGAVTVGDRLLLSPSRLAA
                     RVRGIQVHNETFSYARAGDRCALAISGPRIERARLKRGDWLIDASLHAPTQRIDAVLQ
                     AVADRGVRHAGRAHIHFGAAGTTGRVLMQQAQDLAQGEIGFVTIALDRPGACLYGDRL
                     IVRDDSSGRVVAGGHVIDPFSPDRRIRRERRAASLAAHALPGPTES"
     gene            complement(1193..>1783)
                     /locus_tag="VHX39_19215"
     CDS             complement(1193..>1783)
                     /locus_tag="VHX39_19215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEX3993309.1"
                     /translation="ECATVEQAVAAAEGFGYPVVMKILSPDIVHKSEIGGVLLDVSDA
                     NAVREGFALLLDRAKTAAPTAKLDGVLVAKQLKGGVECILGIHRDPVFGPMAMFGLGG
                     IFVEVLKDVVFRRCPFGADVAETMIRSIKGAPLLLGARGRKKADVKALAETLSRLSAF
                     AAAAGPRLQSIDINPVFAMPEGEGAFAVDAVIEVGD"
BASE COUNT          369 a          626 c          505 g          283 t
ORIGIN      
        1 cgattccgta ggcccaggaa gcgcgtgcgc agcgagcgaa gctgcacggc gttcgcgccg
       61 gattcgccga tccggggaaa acgggtcgat gacgtggccg cccgccacca cgcgtccgct
      121 ggaatcatct cgcacgatca gccggtcgcc gtacagacac gcaccaggcc tatccaatgc
      181 tatggtaacg aaaccaattt cgccctgcgc cagatcctgg gcttgttgca tgagcacgcg
      241 acccgtcgtg cccgcggcac cgaaatgaat atgggcacgc cccgcatggc gaacgccgcg
      301 atccgcaacg gcctgcaaca ctgcgtcaat ccgttgcgtc ggcgcatgca acgaagcatc
      361 gatcagccag tcacctcgtt tcagtctcgc ccgctcgatc ctgggcccgg agatcgccaa
      421 cgcacagcgg tcgcccgctc gagcatagga aaaagtttcg ttgtgcacct gaatgccgcg
      481 tacccgtgca gccagccgcg atggcgacag cagcagccgg tcgccaacgg taacggcacc
      541 ggaggcgaca gtcccggtca cgaccagacc cgcacccgcc ggcgagaaac ttcggtcgat
      601 cgcaaggcga aatccgcccg acgcgtcgcg cgcccgatgc gcggccgcat tcgcctcgat
      661 cgcggccagc actgaaggaa tgccatcgcc ggtgacactc gacgcctcca gcaccggcgc
      721 ggtggcaaag ccggcggcat cgagcacatc gcgtaccgca cgatgtgcag cgtcgcgctg
      781 caccgcatcg acccggtcaa tcttactcag caccgctgtg acatcagcga ccccggtcaa
      841 ccgcaggatc gacaaatgct cccgcgtttg cggcatcggt ccgtcatcgg cggcgatcac
      901 cagcagcaca gtatcgatcg acaaaacgcc ggccagcata ttgccgagaa accgttcatg
      961 tcccggaacg tcgacaaaac cgacctggac gcccgacggc agccggacat gggcgaaccc
     1021 cagatcgatc gtcatgccgc gccgcttttc ttccggcaag cggtccgcgt cgatcccggt
     1081 cagcgccctg atcagcgctg tcttaccgtg atcgacatgt ccggccagag caatgatcat
     1141 tggatgccct gtgtttacgt ctcctcaggc aacgaacgca ccgccgctcg gatcaatccc
     1201 cgacttcaat gaccgcatcc accgcgaacg cgccttcgcc ctccggcatg gcaaagaccg
     1261 ggttgatgtc gatcgactgc agccgaggac cagcagcggc agcaaacgcc gacaaccggg
     1321 ataatgtttc cgccagcgcc ttgacatccg ccttcttgcg gccgcgagcg ccgagcaaaa
     1381 gcggtgcgcc cttaatggac cggatcatcg tttcggccac gtcggcacca aacgggcaac
     1441 gccggaacac cacgtcctta agcacctcga cgaaaatgcc gcccagtccg aacattgcca
     1501 tgggtccgaa gaccggatcg cggtgaatgc ccaagatgca ctcgacgccg cccttgagtt
     1561 gtttggcgac caggacaccg tccagcttcg ctgttggtgc cgcggtcttt gcgcgatcca
     1621 atagcaacgc aaatccctcg cgcacggcat tggcgtcaga aacgtcgagc agcacgccgc
     1681 caatttccga cttgtgcacg atatcggggg acaggatttt catcacgacc ggataaccaa
     1741 atccttcggc cgcggcgacc gcctgctcga ccgttgcgca ttc
//
LOCUS       DATAVD010001005         4320 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2701648, whole genome shotgun sequence.
ACCESSION   DATAVD010001005 DATAVD010000000
VERSION     DATAVD010001005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4320
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2701648"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..846
                     /locus_tag="VHX39_19220"
     CDS             <1..846
                     /locus_tag="VHX39_19220"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEX3993310.1"
                     /translation="KGAARWISVAGNRIQPSEFLKPCFALTTAWLLARQRREPKFPGV
                     LIALGLFVVIVAMLKKQPDVGMMAVIGAVFLIQLFVSGINMFFITLLLGLAGGGGVVL
                     YTLLPHVHRRVDQFLYGKDGSNYQIGKVMEAFANGGLTGRGAGEGMVKDSIPDVHADV
                     VFAVVGEEFGLIVCLLLVGVFAFIVLRGLLRLMREQELFVVFAAAGLLSGFGLQTMVN
                     LFSTLGMMPTKGMTLPLISYGGSSAVAVGLGMGMLLSLTRARARDERTRESRMPDAMM
                     LREAA"
     gene            932..2164
                     /gene="murG"
                     /locus_tag="VHX39_19225"
     CDS             932..2164
                     /gene="murG"
                     /locus_tag="VHX39_19225"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEX3993311.1"
                     /translation="MRGPEVRPIVIAAGGTGGHFYPAEALASALIGRGHWVVLMTDAR
                     AVVPRGSVFDARNQYVLPAAGIAGRGAARASKAVFALAAGVARARSILARIRPAAVVA
                     FGGYPAVPPVLASRLVRGRPPVILHEQNAVLGRANRFLARHASVLALSFADTARVPPK
                     VRRLVTGNPVRPAVAALCEADYEPPLGPKHDGSILGGSIRVLVLGGSLGARVFSEVVP
                     AAIERLPDAIRARLMITQQCRAEDLDQVRATYAAQRISAELATFFPDVADRLRAAHLV
                     IARAGASTVAELAIAGRPSILVPLPGAIDNHQSANAKALADAGGAWVMPQPGFTVDSL
                     AERLGELLSDSATLALGAMHARRVARPGAADALADLVEQVMRDTAPATEPASGGPLRG
                     QSVRPATRTDEQPRMGQS"
     gene            2161..3591
                     /gene="murC"
                     /locus_tag="VHX39_19230"
     CDS             2161..3591
                     /gene="murC"
                     /locus_tag="VHX39_19230"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEX3993312.1"
                     /translation="MRALPLSIGRIHFVGIGGIGMSGIAEVLHTLGYTVQGSDISDSA
                     NVWRLREAGIPVTIGHDGANLGDARVVVVSTAVKRDNPEVVAARARFIPVVRRAEMLA
                     ELMRLRWSIAIGGTHGKTTTTSLIACMLEAAHLDPTVINGGIINAYGTNTRMGDGDWM
                     VVEADESDGSFLRLPAVIAVVTNMDPEHLDHWGTPEAMIAAYDQFVANIPFYGFAVLC
                     IDHPAVQQMIPRLSDRRIITYGFSPQADVRAEKMRPDKAGSTFEVVVTDRARNRSRRM
                     GPFRLPMLGEHNVQNALAAIAVGVEMEIGDTVLRDAFLGFKGVRRRFTRTGEAGGITV
                     IDDYGHHPVEIAAVLKAARQAGARDVVAVVQPHRFTRLQSLFNEFCACMNDAGTVIVA
                     DVYPAGEAPIQGIDRDALVDGMRARGHRSVVPLPAPARLAEMVHAIAKPGDFVVCLGA
                     GSITQWAATLPAELTALQANARQGAA"
     gene            3588..>4320
                     /gene="murB"
                     /locus_tag="VHX39_19235"
     CDS             3588..>4320
                     /gene="murB"
                     /locus_tag="VHX39_19235"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEX3993313.1"
                     /translation="MTAVARKELPPVEPGLPPIRGRVQADAPLAPFTWFRTGGNAEFL
                     VRPADAADLAALLRALPATTPVQVIGAASNLIIRDGGLPGVTIRLARGFSTIAVEPDG
                     VIAGAAALDLTVAETAAAAGLTGLEFLSGIPGTIGGAVAMNAGAYGGEIAHVLSWAEC
                     VTRDGERRRLSSTDLAFGYRHASVPPGSVITRVRLAATSGATPVIAAKMADIRAAREA
                     SQPVRARTGGSTFRNPDGGMKAWELI"
BASE COUNT          682 a         1353 c         1448 g          837 t
ORIGIN      
        1 aaaggtgcgg cgcgttggat ttcggtcgcc ggcaaccgca ttcaacccag cgaattcctg
       61 aaaccctgct ttgcgttgac caccgcgtgg ctgctggctc ggcagcggcg cgagccaaaa
      121 tttcccggcg ttctaattgc gctcggactg ttcgtggtga ttgtggcgat gctgaaaaag
      181 cagcccgacg tcggcatgat ggcggtcatt ggcgcggtgt ttctgatcca gttgttcgtc
      241 agtggcatca atatgttttt catcactttg ctgcttggcc tcgcaggcgg cggtggcgtg
      301 gtgctttaca ctctgctgcc gcatgtgcac cgccgggtcg atcagttcct gtacggcaaa
      361 gacggcagca actatcagat cggtaaggta atggaggcat tcgccaatgg cggattgacc
      421 ggtcgcggcg caggtgaggg gatggtcaag gacagcatcc cggacgtgca cgccgacgtc
      481 gtttttgccg tggtgggcga ggagtttggt ctgatcgtct gcctgcttct ggtcggcgta
      541 ttcgctttca tcgtactgcg cggcttgctg cggctgatgc gtgagcaaga actgttcgtc
      601 gtgttcgccg ccgcgggtct gctgtccggc ttcggattgc agacgatggt gaatttgttc
      661 tccaccctgg gcatgatgcc gaccaaggga atgacgttgc cgttgatctc atacggcggt
      721 tcctcggcgg tcgcagtcgg tctgggcatg ggaatgttgc tgtcgctgac ccgagccagg
      781 gcgcgggacg agcgcacacg agagagccgc atgcctgatg cgatgatgct ccgggaggcg
      841 gcgtgatgcg atcccgagtg acgtatcagg gttacctggc gaattccggg gcggccttgc
      901 agcaacgcga tgggcgctgg aggcatcagc catgaggggc ccggaagtgc gtcccatcgt
      961 cattgccgcc ggcggcacag gcgggcattt ctatccggcc gaggctctcg cttccgcact
     1021 gatcgggcgc ggtcattggg tggtcctgat gacagacgcc cgcgcggtcg tgccacgcgg
     1081 cagtgtcttc gacgcgcgta atcagtatgt gttgcctgcc gccgggattg ccgggcgcgg
     1141 cgctgcgcga gccagcaaag ccgtgttcgc attggccgcc ggcgtggcgc gggcgcgcag
     1201 catcctggcc cgcattcgac ctgccgcggt ggtcgcgttc gggggttatc cagccgtacc
     1261 gcccgttctt gcctcacgcc tggtgcgggg tcggccgccg gtcattttgc atgaacagaa
     1321 cgcggtgctt ggccgggcca accggttttt ggcgcggcac gcaagtgtcc tggcacttag
     1381 ctttgcagac actgcccgcg tgccgccgaa agtgcgccgc ctggtaaccg gcaatccggt
     1441 tcggcctgcg gtcgccgcat tgtgcgaagc cgattacgaa ccgccgctcg gcccgaaaca
     1501 tgacggatcg atccttggcg ggtccatccg ggttctggta ctgggcggct ccctcggagc
     1561 ccgtgtattt agcgaggtcg tgccggcagc cattgaacgt ctgcccgatg cgatccgggc
     1621 caggctgatg attacgcagc aatgccgagc cgaggacctg gatcaggtcc gtgcgaccta
     1681 tgccgcccaa aggatcagcg cggaactggc aacgttcttc ccggacgtcg ccgatcggct
     1741 tcgcgccgca catctggtga tcgcacgcgc cggagcctcg accgtcgcgg aactggcaat
     1801 cgcgggacgg ccgtcgatcc tggtgccgct gcctggcgcg atcgacaacc accaaagcgc
     1861 caacgccaag gcactggctg acgccggcgg tgcctgggtc atgccgcaac cgggtttcac
     1921 cgtcgattct ttggcggaac gtctgggtga actgttgtca gactcggcga cgttggcttt
     1981 gggtgcgatg cacgcaaggc gggtggcaag accgggggcg gcggacgcac ttgccgacct
     2041 cgtggaacag gtgatgcgcg atacggcgcc tgcgacggag ccggcctccg gcggaccgtt
     2101 acgcgggcaa tccgtccggc cggcaacgag aaccgacgaa cagcccagga tgggacagtc
     2161 atgagggcgc tgccactttc gatcggtcgg atacatttcg ttggtatcgg cggcatcggc
     2221 atgtcgggca ttgccgaggt gctgcatact cttggctata ccgtgcaggg ttccgacatt
     2281 tccgactctg ccaacgtctg gcggctgcgc gaggctggca tcccggtgac gatcggccac
     2341 gacggagcca atctgggtga tgcacgggtc gtcgtcgtct ccaccgccgt gaaacgcgac
     2401 aatcccgagg tcgtggccgc ccgggcccgt ttcatcccgg tagtcaggcg tgccgaaatg
     2461 ctggccgagt tgatgcgcct gcggtggtcc atcgccatcg gcggcaccca tggcaagacc
     2521 acaacaacca gcctgatcgc ctgcatgctg gaggccgcgc atctcgatcc caccgtgatc
     2581 aacggcggca ttatcaacgc ctatggcacc aacacccgca tgggggacgg tgactggatg
     2641 gtcgtcgagg ccgacgaaag cgatggcagc ttccttcgtc ttcccgccgt cattgcggtc
     2701 gttaccaata tggaccccga gcatctggat cactggggaa ctcccgaggc gatgatcgcc
     2761 gcctatgacc agttcgtcgc caacatcccg ttctacggtt ttgccgtgct ttgcattgac
     2821 cacccggcgg tgcagcagat gatcccgcgg ctgtccgacc ggcgcatcat cacttacggc
     2881 ttctcgccgc aggccgatgt tcgcgcggag aagatgcgtc cggacaaagc cggctcgacg
     2941 ttcgaggtcg tggtgacgga ccgcgcccgc aatcgctcgc gccggatggg tccgttccgc
     3001 ctgccgatgt tgggcgagca caatgtgcaa aacgccttgg ccgcgatcgc cgtcggtgtg
     3061 gaaatggaaa tcggcgatac cgttctgcgc gacgcattcc tcggcttcaa gggcgttcgc
     3121 cgccgcttta cccgcaccgg tgaggccggc ggcatcaccg tcatcgacga ctatggccat
     3181 catccggtgg agatcgccgc cgtactgaaa gccgcccggc aggccggcgc gcgcgatgtc
     3241 gttgcggtgg tgcaaccgca tcgtttcacg cggctgcaat cgctgttcaa cgagttctgc
     3301 gcctgcatga acgacgccgg tactgtgatt gtcgccgacg tctatccggc tggtgaagca
     3361 ccgatccagg ggatcgaccg cgacgcgctg gttgatggca tgcgcgcccg cggccaccgc
     3421 agtgtggttc cgttgccggc gcccgcccgg cttgcggaaa tggtgcatgc cattgcgaaa
     3481 cctggcgatt tcgtcgtctg cctgggggcc ggatcgatca cgcaatgggc tgcaacattg
     3541 cccgcagaat tgacggcgct gcaggcgaat gctcggcaag gtgcggcatg acggccgtcg
     3601 cccgcaagga gttgcctcct gtcgagccgg gcttgccgcc aatccgtggc cgcgtccagg
     3661 ccgacgcgcc actcgcgccg ttcacctggt ttcgcaccgg aggaaacgcc gagttccttg
     3721 tccggcccgc cgatgcggcc gaccttgccg cattgctacg ggcgttgccg gcgaccacgc
     3781 cagtgcaggt aatcggtgcc gcttccaatt tgatcattcg cgacggtggc ctgcccgggg
     3841 tgacgatccg cctcgcgcga ggtttttcga ccattgccgt tgagccggat ggcgtgattg
     3901 ccggcgcagc cgcactggat cttacggtcg cagaaaccgc tgccgctgcc ggcctgaccg
     3961 ggcttgagtt tctgtctggc attcccggca ccatcggcgg cgcggtcgcc atgaacgccg
     4021 gcgcatacgg tggcgaaatc gcgcacgttc tctcctgggc cgagtgcgtg acgcgggatg
     4081 gcgaacggcg gcgtctgtca tcgacggatc tggcattcgg ctaccgccat gccagcgtcc
     4141 cgcccggcag cgtgatcacc cgcgtgcggt tggcggcaac atccggcgca accccggtga
     4201 tcgcggcaaa gatggcggac attcgtgccg cccgggaggc gtctcagccg gtccgcgcac
     4261 gcaccggagg gtcgacgttc cgcaatccgg atggcggcat gaaggcctgg gaactgatcg
//
LOCUS       DATAVD010001006        10134 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_655499, whole genome shotgun sequence.
ACCESSION   DATAVD010001006 DATAVD010000000
VERSION     DATAVD010001006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10134
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_655499"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..229)
                     /locus_tag="VHX39_19240"
     CDS             complement(<1..229)
                     /locus_tag="VHX39_19240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993314.1"
                     /translation="MGQDVAQERNVGGNPLQPELGERSGQPRHRGSEIGLRRMRDHLG
                     QQRIERARGAIPGIAEPVGAHTRTVRRLIDAQ"
     gene            512..2308
                     /locus_tag="VHX39_19245"
     CDS             512..2308
                     /locus_tag="VHX39_19245"
                     /inference="COORDINATES: protein motif:HMM:NF013225.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX3993315.1"
                     /translation="MIVAISVAEGDEVRQGQQVAVVEAMKMQHVINAPFSGIVRRVTM
                     AAEDVVREGFPIVFIQQAEVAGGLAVDAAVERDLDHIRDDLRESIERHALTLDENRPE
                     AVARRRKTGHRMARENIARLVDPGSFDEYWPLIVARQHQRHSMETLRKSTPGDGVVAG
                     MCTINGDLFDPARARAALVHYDYTVLAGTQGHRNHYKQDRLFELVHRFRLPLVLFGEG
                     GGGRPGEDNIGPRVAIDTTTFTTFSRLSGLVPLIAIVNGRTFAGNTALVACSDVIIAT
                     EGSTLGMGGPAMIEGGGLGIYTPEEVGPMSVQVPNGVVDILVKDEFAAVDVAKKYLSY
                     FQGPIAAWEALDQRTLRHAVPENRLRLYDMRTIIETIADKESILEIRPKFGIGIITAF
                     IRVEGHPMGVIANNPHHLAGAVDSPGADKGARFLQLCDAFDIPVLSLIDCPGIMVGPE
                     VERTALVRHCTRLFNVGANMTTPLFTVVVRKAYGLGAQAMLGAGALVGFFAVAWPTAE
                     FAGMNIEGAVKLGYRKELMAIEDPEDRRRAFEGRTEAAYDAAKAVNAVMGGGIDDVID
                     PAETRRWIANALKRVPPTPPRAGKKYPYVDPW"
     gene            3356..6790
                     /locus_tag="VHX39_19250"
     CDS             3356..6790
                     /locus_tag="VHX39_19250"
                     /inference="COORDINATES: protein motif:HMM:NF017077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3993316.1"
                     /translation="MKRTSQATAASRKAGLDPTVSLGLAAVLLFFVISGAVAYFNLRT
                     VSSDNDKVVHSHDVVTALDHLLSSAQDAETGQRGFLLTGKESYLGPYDAAVASLPSQI
                     DEIARLTREDPTQQRRIGPLRSHVLAKLAELKATIDTRRTNGAQAALAVVDTDRGKVE
                     MDAVRQQIEGMAQEEGILRGQRLAEMSSAQSTALASGVMSGLLGIVLTAIVGFLIRRA
                     TIERSRQNWFQAGQVGLEAVMRGNQETDELGRNILAFLSQYLGAIVGAAYVADGDAYR
                     RSASFGVPASAAIPERFWPEEGLLGQAAAENRPLLIADVPDGYLAFGSALGQDKPRHL
                     VISPGSINGSVNAVLELGFMRSVDADVLTILEQMSAAIAVAIRSASYRGELQTLLDET
                     QRKSEELQVQGEELRVSNEELEEQSRALKESQARLEQQQAELEQTNSQLEEQAQQLEA
                     QRDDLERANASVQLKARELEQASRYKSDFLANMSHELRTPLNSSLILAKLLADNPNDN
                     LTADQVKYAQTIQSSGNDLLNLINDILDLSKIEAGHVEIRPETIAVEHLTNNLRRIFQ
                     PIAGDRKLQFIIEVAPSCPPTIETDLQRLEQVLKNLLSNAFKFTAAGQVALTIKSAGN
                     GQVALSVTDTGIGISDEQQQRIFEAFHQADGTVSRQYGGTGLGLSISRELVRLLGGAI
                     RVKSRPGEGSTFTVNIPETYDPALVASRETRANLLPASPPFPVGKPPSPPPLSSRRVE
                     DDRDAVEDPRRVLLVVEDDDTFAAILRDLSREMGFRTLLAATAEEALTLARQFMPNAI
                     ILDVGLPDQSGLSVLDRLKRDVLTRHIPIHVVSAGDHAQTALSLGAVGYMLKPVKREQ
                     LAEVLGKLQDRLAQRMHRVLIVEDDPVQREAVGKLLASHDVETVAAGTGAACLELLRT
                     QTFDCMVLDLSLPDASGYSLLETLSQEGAYSFPPVIVYTGRDLSADDELRLRRYSKSI
                     IIKGAKSPERLLDEVTLFLHQVVSELPDEQQKMIQKARNRDALLEGRRIMIVEDDVRN
                     VYALTNILEPRGAIVEIARNGQESLDLLRKSSGHPALAIDLVLMDVMMPVMDGLTATR
                     EIRKNAGWKNLPIITLTAKAMPDDQQRCIDAGANDYMAKPLDVEKLLSLVRVWMPR"
     gene            6800..7624
                     /locus_tag="VHX39_19255"
     CDS             6800..7624
                     /locus_tag="VHX39_19255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HEX3993317.1"
                     /translation="MSEKAEDIEIRLLLEALHLRYHYDFRSYAFASVKRRLKVAREQM
                     GFSTFSGLQESLLHEPATLPRLLGYLTVQVSEMFRDPSYFRAIRETVVPHLRTYPSLK
                     VWVAGCSDGEELYALVILFREEGLEERTLFYATDINQEALARAQAGIFALDRIQLFTE
                     NHRTAGGKSSLSDYYSAAYGRASFDKSLRRRVVFADHSLATDAVFAEMHLISCRNVLI
                     YFDRRLQDRAVGLFRDSLARKGFLGLGAKETLRFSDHAGSFTDFVRDEKIYQRKVE"
     gene            7621..8187
                     /locus_tag="VHX39_19260"
     CDS             7621..8187
                     /locus_tag="VHX39_19260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEX3993318.1"
                     /translation="MSGIPAEAVVIGSSAGALEALSVILPALPASYRLPVIVVVHVPA
                     DRRSVLAELFRAKCRISVREAEDKEPIVGGTVYFAPPDYHLLVEKENRLSLSSDAPVF
                     FSRPSIDVLFESAADAYGAALIAVILTGANQDGAAGMSAVVEAGGLAIVQDPAHAFAR
                     AMPEAALTMCSDARVLSLDDIAAWLQKV"
     gene            8196..9752
                     /locus_tag="VHX39_19265"
     CDS             8196..9752
                     /locus_tag="VHX39_19265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3993319.1"
                     /translation="MGQVHFLLVDDLEENLLALEALLHRDGLTILKARSGDEALEVLL
                     QHDVALALVDVQMPGLNGFELAELVRGNERTRRIPIIFVTAGGADAQRRFRGYEAGAV
                     DFIYKPIEADILRSKADVFFELYLQRQQIASQRDELKAQAGALKEADRLKDEFLATLA
                     HELRNPLAPLRHGLDILQRNPDVASATQIRGMMDRQLVHLVRLIDDLLDVSRVSQGKI
                     ELRKETIVVSDVVRSALETSRPLIDGSGHTLTVDLPQEPLWLNADLTRLAQVVGNLLN
                     NAAKYTPEGGQIGLTVRVENDCAAISVSDTGVGIPKDLQARVFQLFAQVDQHLDRARG
                     GLGIGLALVKQLVALHGGTVDVESAGIGQGSTFVVRVPLAAGHTAPDKVEEPATVSAQ
                     VTPLRVLVVDDTLEVAQTVGWMLEEMGHDYRLVHDGRKAVDAAKDFLPDAILLDIGLP
                     GMDGYAVCRALRQEERLRSTIVIAQTGWGQDKDKASASEAGFDHHLVKPVAFQDLERL
                     LAAAVKPRQG"
BASE COUNT         1864 a         3082 c         3340 g         1848 t
ORIGIN      
        1 gctgagcgtc tatgaggcgc cgaacggtcc gggtgtgcgc accgacgggt tcggctatgc
       61 cgggtatcgc acctcgggcg cgttcgattc gctgctggcc aaggtgatcg cgcatgcgcc
      121 gcagcccgat ttcgctgccg cggtggcgcg gctgtcccga gcgctcgccg agttccggct
      181 ggagggggtt gccaccaaca ttccgttcct gcgcaacatc ctggcccatc cggatttcgt
      241 tgcgggcaac gtgcatacgc ggtgggtcga cgaacagata gccaccctgg cgacgacagg
      301 ggaacagcgg cagctattcg ttgtgccggc gcggcaggcg gcaaccgatg cggggttcgc
      361 aggcgctcgg gtgaaaagcc gcgatccgct ggcgctgttt gcgcatgacg ccgcgtccaa
      421 ggcggagcaa acggcatcca tagaagatga tgaagcgccg gatctcgcag gcccggatgg
      481 gtcggtcggc gtcgcctcgc cgatccaggg gatgatcgtg gcgatcagcg tggccgaggg
      541 ggatgaggtg cggcagggcc agcaggtcgc cgtcgtggaa gcgatgaaga tgcagcacgt
      601 catcaatgcc ccgttcagcg gcatcgtccg ccgcgtgacg atggcggccg aggacgtggt
      661 gcgggaaggc ttccccatcg tgttcatcca gcaggccgag gtggcgggcg gtctcgctgt
      721 cgatgcggcg gtcgaacgcg acctcgatca catccgcgac gatctgcggg agagtatcga
      781 acgccatgcg ctgacgctgg acgagaaccg gccggaggcg gtggctcgcc ggcgcaagac
      841 cgggcaccgg atggcgcggg agaacatcgc gcgcctggtc gatcccggat catttgacga
      901 atactggccg ctgatcgttg ctcggcagca tcagcgccat tcgatggaga cgctgcgcaa
      961 gagcacgccg ggcgatggcg tcgtcgcggg catgtgcacg atcaacggcg atctgttcga
     1021 cccggcgcgg gcgcgggccg ccctggtgca ttacgactac accgtgctgg cgggcacgca
     1081 gggccaccgc aaccattaca aacaggatcg cctgttcgaa ctggtccaca ggttccgact
     1141 gccgctggtg ctgttcggcg agggcggcgg cggacggccc ggcgaagaca atatcggccc
     1201 gcgtgtcgcc atcgatacga cgacgttcac tacgttctcg cggctcagcg gactggtgcc
     1261 gctcatcgcg atcgtcaacg gccgcacctt cgcgggcaat accgcccttg tcgcctgcag
     1321 cgatgtcatt atcgcaaccg aaggctcgac gctcgggatg ggcggcccgg cgatgatcga
     1381 gggtggcggc ctgggcatct acacgcccga ggaagtgggc ccgatgtcgg ttcaggtgcc
     1441 gaacggggtg gtcgacatcc tggtcaagga cgaatttgcc gcggtggatg tggcgaagaa
     1501 atacctctcg tacttccagg gaccgatcgc ggcatgggaa gcactcgatc agcggactct
     1561 gcgccacgcg gtgccggaga accggctgcg cctctacgac atgcgcacga tcatcgagac
     1621 gatcgccgat aaggaatcga tcctcgaaat ccgcccgaag ttcggcatcg gcatcatcac
     1681 cgccttcatc cgcgtcgagg gccacccaat gggcgtgatc gcgaacaatc cgcatcatct
     1741 tgccggggca gtggattcgc ccggcgcgga caagggcgcc cggtttctgc aactgtgcga
     1801 cgccttcgac atcccggtcc tgagcctgat cgattgcccc ggcatcatgg tcgggccgga
     1861 ggtggagcgc accgcgctgg tgcggcattg cacccggctg ttcaacgtcg gcgccaacat
     1921 gacgacaccg ttgttcaccg tcgtcgtccg caaggcctat gggcttggcg cgcaggcgat
     1981 gctgggtgcg ggtgcgttgg tcggtttctt cgccgtcgcg tggcccaccg ccgagttcgc
     2041 cggcatgaac atagaaggcg cggtcaagct cgggtatcgt aaggaactca tggcgatcga
     2101 ggaccccgag gaccgccgac gcgcgttcga aggccgcacg gaagctgcct atgacgccgc
     2161 caaggcggtc aacgccgtga tgggcggcgg catcgacgat gtgatcgatc cggctgagac
     2221 acggcgttgg atcgcgaacg ccctcaagcg ggtgccgccg acgccgccgc gggccgggaa
     2281 gaagtatccc tatgtggatc cgtggtgagt cgaggcaaaa cccggcgtta ccgattgaac
     2341 gcctcgtcct cggagattat tgcgtcgggt ggactatgga gttctacaca tcctgccgca
     2401 ggacgccgcc ttcacgggcg agatcattac ggaacgcatc tcgaatgaaa tcgacggggc
     2461 cgaggtgtct gtcttcaaaa gacatcacgt gtacggcgtc ccggccagcg ccaaagacga
     2521 tgctgccgaa ttttgcccag atcgacgcca agccgcacat aggccgcagc gtcgcgcagc
     2581 aaaccccgaa ggttccgagt gagatggtgc cggaaacgat ggcgctgaac tggcgttgaa
     2641 gtcgcggacc gaaaacagga aggcacactt ttggagtctc ggcggaacaa ccgcataatg
     2701 tgggttcgta cgcatctgtt tcgcgtgtgg accgctgctg ccgttctggt tggctacgtc
     2761 tacggatggt tgtactttcc cgaggcactt acctggtgga agagatcgac cgcgtcggta
     2821 atcgagggca cgtgttccct gataccctat ccttggggag accggatcga gagtacgctg
     2881 gggaattttg gcctctgggt ccaaatcacc tttgcgatca tcgtatttcg ggtcgtgatc
     2941 tggttcgcca tgtcggtgct cagattcatc ttgggccggc ggtggcgggg cgaacgatga
     3001 gcttctgtcg ccatgccgcg tgagcccgct gcaagcggcc ggaaagccgg cttgtaacgc
     3061 cggagccagc gaggcgggca gatcggtcga cgaccggccc tcgggcggcc gccgtggtcg
     3121 cataaccgtg atccgataag caaggaccgc tgataaccgg ctttgtccgc gaaccggttc
     3181 ggcccgtgac aggatagacg ctttggtgcc acaagcgggc taaaatgaat cgttgagcgt
     3241 ccgatacccg ccgatccctg gaaccagcga ccagggcgag gcgttcgcat ccggcttgga
     3301 tggcgctgcc gcccctgtcc ggttccttga tcagaagagt atgacgagaa cattgatgaa
     3361 gcggacgtcc caagctaccg cggccagccg aaaggccggc ctggacccga ccgtgtcact
     3421 cggcctggcc gccgttctgc tgttttttgt gatcagcggc gcggtcgcct acttcaacct
     3481 tcggacagtc agcagcgata acgacaaggt cgtgcattcg catgacgtcg tcacggcgtt
     3541 ggaccacctg ctgtccagcg cccaggatgc ggagaccggc cagcgcggct ttctgttgac
     3601 cggcaaggaa agttaccttg gaccctatga tgcggcggtc gccagcctcc cgtcgcagat
     3661 cgatgagatc gcccggctga cccgcgaaga tccgacgcag caacgacgga tcgggcccct
     3721 cagatcgcat gtcctcgcca agctggccga gctcaaggca acgatcgata cgcggcggac
     3781 aaacggcgcc caggcggcgc tggccgtcgt cgataccgat cgcggcaagg tcgaaatgga
     3841 cgcggtccgc caacagatcg aggggatggc gcaggaagag ggtattttgc gcggccagcg
     3901 actcgccgaa atgtccagcg cccaaagtac ggcgctcgcc agcggcgtca tgtccggact
     3961 gctgggtatc gtgctgaccg ccatcgtcgg cttcctgatc cgccgggcca ccatcgaacg
     4021 ctcccgccag aactggtttc aggccggtca ggtgggtctg gaagcggtca tgcggggtaa
     4081 ccaggagacc gacgaactgg gcaggaacat tcttgccttc ctgtcgcaat atctcggcgc
     4141 catcgtcggg gccgcctatg tcgcggatgg tgacgcctac aggcgctcgg caagcttcgg
     4201 ggtgccggcg agcgcggcca ttccggaacg gttctggccg gaggaaggcc ttctgggcca
     4261 ggcggccgcg gaaaatcggc cgcttctcat tgccgacgtg cccgacggct atctggcgtt
     4321 cggatccgcc ctggggcagg acaagccgcg acacctggtc atttcgcccg gcagcatcaa
     4381 cggcagcgtc aacgccgttc tcgaactcgg cttcatgcgg tcggtggatg ccgacgtcct
     4441 gacgatcctg gaacagatgt cggcggcgat cgcggtcgcc atacgttcgg caagttaccg
     4501 cggcgagctg cagacgctgc tcgatgaaac ccagcggaag tcggaggaac tgcaggttca
     4561 gggcgaggaa ttgcgtgtct cgaacgagga gcttgaagag cagagcagag cgctgaagga
     4621 gtcccaggcg cggctggaac agcagcaggc cgaactggag cagaccaatt cgcagctcga
     4681 ggagcaggcc cagcagttgg aagcgcagcg cgacgacctg gagcgggcca atgcctcggt
     4741 gcagctcaag gcgcgtgagt tggagcaggc gagccgatac aaatcggatt ttctcgccaa
     4801 catgtcgcat gaattgcgga cgccactcaa ttcgtcgctg atcctggcca agctgcttgc
     4861 cgacaatccc aacgacaatc tgaccgcgga tcaggtcaaa tacgcccaga cgatccagtc
     4921 gtccggcaat gacctgctca acctcatcaa cgatatcctc gatctttcga agatcgaggc
     4981 cggccacgtc gaaatccggc cggaaacgat agccgtcgag cacctgacca acaacctgcg
     5041 acggatcttc cagccgatcg ccggggacag gaagctgcaa ttcatcatcg aggtcgcgcc
     5101 atcgtgcccc ccgacgatcg agaccgatct gcagcggctg gagcaggtgc tgaagaacct
     5161 tctgtccaac gccttcaagt tcactgctgc ggggcaagtc gcgctgacaa tcaaaagcgc
     5221 cggcaatgga caggtggcct tgtcagtgac cgatacgggt atcggcatat cggacgaaca
     5281 gcagcagcgc atcttcgagg cttttcacca ggccgatggt acggtcagcc gccaatacgg
     5341 cggcaccggc ctcggccttt ccatttcccg tgagctggtg cgtttgctgg gcggcgcgat
     5401 ccgggtgaag agccggccgg gtgagggcag caccttcacc gtcaacattc ccgaaaccta
     5461 tgacccggcc ctggtggcgt cgcgtgagac gcgggccaac ctcctgccgg cgtcgccccc
     5521 cttccccgtc ggcaagccgc catcgccccc gcccctgtca tcccgccgcg tggaggatga
     5581 tcgcgacgcg gtggaggacc cacgccgggt tcttctggtc gttgaggatg acgacacgtt
     5641 cgccgccatc ctgcgggacc tgtcccggga aatgggattt cggaccctgc tggcggcgac
     5701 cgccgaggaa gcgctgacgc tggccaggca gttcatgccc aatgcgatca tcctcgatgt
     5761 cggccttccc gatcagtcgg ggctttcggt gctggatcgg ctgaagcgcg atgtcctgac
     5821 gcgccatatt ccgatccatg tcgtctcggc cggcgaccat gcgcagacgg cgctgtcgct
     5881 gggtgcggtc ggttacatgc tgaagccggt caaacgggaa caactggccg aggtcctggg
     5941 gaagcttcag gacaggctgg cgcaacgcat gcatcgcgtg ctgatcgtcg aggacgaccc
     6001 ggtgcagcgg gaggcggtgg gcaaactgct ggcatcccac gacgtggaga cggtggcggc
     6061 cggcaccggc gcggcgtgcc tggaactgct gcgaacacag acgttcgact gcatggtgct
     6121 cgacctgtct ttgcccgatg cgtcaggcta ttccctgctg gagacgctga gccaggaagg
     6181 cgcttattcg tttccgccgg tcatcgtcta taccggccgg gacctgtcgg cggatgatga
     6241 gctccggctt cgccgctact ccaaatcgat cattatcaag ggtgcgaagt cacccgaacg
     6301 gctgctcgac gaggtcacac tgttcctgca ccaggttgtc tcggagctgc cggacgaaca
     6361 acagaaaatg atccaaaagg cgcggaatag ggacgcgctt ctggaaggcc ggcgcattat
     6421 gatcgtcgaa gacgacgtac gtaacgtcta tgcgttgacc aacatcctgg agcctcgtgg
     6481 cgcgatcgtg gaaattgccc gtaacggcca ggaatcactc gatcttctac ggaagtcgtc
     6541 ggggcatccc gcgctggcga tcgacctcgt tctcatggac gtgatgatgc ccgtcatgga
     6601 cggtctgacc gccacgcgcg aaattcgaaa gaatgccggt tggaagaacc tgccgatcat
     6661 cacgctgacg gcgaaggcga tgccggatga tcagcagcgc tgcatcgatg ccggggccaa
     6721 cgattacatg gccaagccgc tggatgtcga gaagctgctg tcccttgtgc gggtctggat
     6781 gccgcggtga gggcatttcg tgtctgagaa ggccgaggat atcgaaatcc ggctgctgct
     6841 ggaggcgctg catctccggt atcattacga tttccgcagc tatgccttcg cctccgtcaa
     6901 acgccgcctg aaggtggcgc gcgagcaaat gggcttttcg acgttctcgg gcctgcagga
     6961 aagcctgctg cacgaacccg ccacgctgcc ccggctgctt ggctacctga cggtccaggt
     7021 gagcgagatg tttcgcgacc cgtcatattt ccgggcaatc cgcgagacag tggtgccgca
     7081 tctgcgcacc tacccgtcgc tcaaggtctg ggtcgccggt tgcagcgacg gcgaggagtt
     7141 atacgcgctc gtcatcctgt tccgtgaaga ggggcttgag gaacgcacgt tgttctatgc
     7201 gacggatatc aaccaggagg ctttggcccg ggcgcaggcc gggatcttcg ctttggaccg
     7261 gattcagctc ttcaccgaaa accaccggac ggccggcggg aaatcgtcgc tatcggatta
     7321 ctacagtgcg gcctatggtc gggcttcatt tgacaagagc ctgcgccggc gtgtggtttt
     7381 cgccgatcat agcctcgcga ccgacgccgt gttcgccgag atgcacctga tatcctgtcg
     7441 caacgtcttg atctatttcg atcgtcgcct ccaggatcga gcggtcggcc tgttcaggga
     7501 ttcgctggcg aggaagggct ttctgggtct gggcgcgaag gaaaccttgc gattttccga
     7561 tcacgccggc tcgtttaccg atttcgtgcg cgacgaaaag atctaccaaa ggaaagtcga
     7621 gtgagtggga tccctgccga agccgtggtg atcgggtcct ccgccggggc gcttgaggcc
     7681 ctgtcggtca ttttgccggc gttgccggcg tcataccggc tgccggtcat tgtcgtcgtt
     7741 catgtgcccg ccgaccgacg aagcgtgctc gcggagcttt ttcgggcgaa atgccgcatc
     7801 agcgttcgtg aggccgagga caaggagccg atcgtcggcg gcacggttta ttttgcaccg
     7861 cccgactatc accttctcgt cgaaaaggag aaccgcctgt cactgtccag cgacgcaccg
     7921 gtcttctttt cccgcccgtc gatcgatgtt ctatttgaaa gtgcggccga cgcttatggc
     7981 gccgccctta tcgcggtcat tttgacaggc gccaatcagg atggcgccgc gggcatgagc
     8041 gcggtcgtcg aagcgggcgg cctggcgatc gttcaagacc cggcccatgc gttcgcgcgc
     8101 gccatgcccg aggcggcatt gaccatgtgt tccgacgctc gcgtcttgtc gctcgatgat
     8161 atcgcagcct ggctgcagaa ggtatgagac cgaccatggg acaagttcac tttcttctcg
     8221 tcgacgatct tgaggaaaac ctgctggcgc ttgaggcctt gctgcaccgc gatggcctca
     8281 cgattttgaa ggcgcggtca ggcgacgaag cgctcgaggt cctgttgcag cacgacgtgg
     8341 cgctggcgct ggtcgatgtg cagatgccgg gcctgaatgg ctttgaactg gccgaactgg
     8401 tgcgcggcaa cgaacggacc cgccgcattc cgattatttt cgtgaccgcc gggggcgctg
     8461 atgcgcagcg ccgcttccgt ggctacgagg cgggcgccgt tgacttcatt tataagccca
     8521 ttgaggccga tatcctgcgc agcaaggcgg acgtcttttt cgaactgtac cttcaacgac
     8581 agcaaatcgc gtcccagcgt gacgaactca aggcccaggc cggggcgctg aaagaagccg
     8641 accgcctgaa ggacgaattc ctggcgacgt tggcgcatga gttgcgcaac ccgctggcgc
     8701 cccttcggca tgggctggat atcctgcaaa gaaatcccga cgtcgcaagc gcaacccaga
     8761 tccgcgggat gatggatcgg cagcttgtcc atctggtccg gctgattgac gacctgcttg
     8821 atgtctcccg ggtcagccaa ggcaagatcg aacttcgcaa ggaaaccatc gttgtctcgg
     8881 acgtcgtgcg gtctgctctg gaaaccagcc ggccgctgat cgatggctcg ggccacacgc
     8941 tcacggtcga tctgccgcag gaaccgctgt ggctcaacgc ggatttgacc cgcctggcac
     9001 aagtggtcgg caatcttctg aacaacgccg ccaaatacac gccggaaggc gggcagattg
     9061 gccttacggt tcgggtggag aacgattgcg cggctatcag cgtatcggac accggggtgg
     9121 gcattcccaa ggacctgcag gcgcgggtgt ttcagctttt tgcccaggtc gatcagcacc
     9181 tggaccgagc gcggggcggc ctcggcatcg gcctggcgct ggtgaagcag ttggtcgcgc
     9241 tgcatggcgg caccgttgat gtcgaaagcg ccggtatcgg ccagggcagc acgtttgtcg
     9301 tccgcgtgcc cttggcagcc gggcacacgg cgccggacaa ggttgaggag ccggcaaccg
     9361 tgtccgcgca agtgacgccg ctgagggtgc tggtggtcga cgacacgctg gaagtcgccc
     9421 agacggttgg ctggatgctc gaagagatgg gccacgacta tcggcttgtc cacgacgggc
     9481 gaaaagccgt ggacgcggcg aaggacttcc tgccggacgc tattctactc gacatagggc
     9541 taccggggat ggacggctat gccgtctgcc gggcgttgcg ccaggaagaa cgattgcgat
     9601 ccacgatcgt catagcgcag acggggtggg ggcaggacaa ggacaaggca tccgcgtcgg
     9661 aggcggggtt tgaccaccac ctggtcaagc cggttgcttt tcaggatctc gagcgtctgc
     9721 tcgcggccgc ggtcaaaccg cggcagggct gagaccgtag gccggccgtg tgcgccggcc
     9781 gtcggcccaa tccggacagg ccgcgcgcat tcaagttgtg atgcccaagc cgcgggtttg
     9841 ccgcgagatg tgttgtgtca tgttgcctcc gtgctgccgg ttcagcggcg gcttgcggaa
     9901 cgcctcggta cgccgctacc gtcgcgaaaa gtccaggtga aaccgcaagt ccgtgtgaaa
     9961 ccgcagtccg tccgggaaat ctcgaatgaa aaccttgatc gccgcgagtt gcctcgcgct
    10021 tgccgccgcc tgtgcgcccg ccgtggcggc gaagctgaca accgaaccgt tcggcaccac
    10081 gcaggacggc aaggcggtga cgatcaccac gatgaccgcg cgcgacgggc tgac
//
LOCUS       DATAVD010001007         2034 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1586648, whole genome shotgun sequence.
ACCESSION   DATAVD010001007 DATAVD010000000
VERSION     DATAVD010001007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1586648"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2034
                     /locus_tag="VHX39_19270"
     CDS             <1..>2034
                     /locus_tag="VHX39_19270"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HEX3993320.1"
                     /translation="TPMFAAVDASDAGLWLGQSATDAVVRYHAFRRIPGLDLVVIVGL
                     DQRDVLVPVAAWQQQARLYAGIISGLTAITAILVLSGLRGRRRWGAAGADSGANLAAS
                     QALAEVSRIHADAIERRLHATFAAVADGVSIFDAHLNLVEWNEAFPERSGVDGNLIHP
                     GMAMEEVLRSQAEAGYFGEIKDVEAEVDRRIALLRAGNFGASLSFQTAARVIELRCRP
                     LADGGFVALYTDVTEARQVRQALCDTRAALGREQSSRRRLLEVIAFELNVRRAALVRS
                     IDRLRGIDVPTSMLEPLRGVGKDLAGLAIDATELPRMEASTLVLQPALIELRPLLRDV
                     VDEIRPAARDFGITVYQVVDEDVPTELVADANRIRQIAGVLLHEALRIAEPDTMWLLA
                     DGGGDDCKGAIALRLTIRGFGTPIPEEIQDAMFPALRDVAVPANSDTTPGRFPGTGFG
                     PAIARHLTALMGGQLSCETWSAIDGRTGNDFILTLPSDLLPGQRGRGPGLATAEGKPL
                     PRTRILLVGATTGLRMAAKTMLQRDGHMVDTVATNDAALQAMRQVPYDIAFIDSVLPD
                     ASAEGALASIRDLAGPARILPVILLAQPHDNADESPWRESGADDVLAANPTLEDFSNT
                     IRRHVWLSMSFKIEPGSSTDPVDDYEEGIPILSAERIMELRANLPRDELLDMV"
BASE COUNT          377 a          594 c          647 g          416 t
ORIGIN      
        1 aacaccaatg ttcgctgcgg tcgacgccag cgatgccgga ctgtggctgg gacaatccgc
       61 gaccgacgcc gttgtacgtt accatgcttt tcggagaatt ccgggcctgg acctggttgt
      121 catcgtcggc ctggaccaac gcgatgtgct agtgccggtc gcggcctggc agcagcaagc
      181 gagactttac gccggcatta tctcaggcct cactgcgata accgccatcc tggttttgag
      241 tggattgcgc ggccgccggc gatggggtgc agccggggcc gactcgggcg ccaatctggc
      301 cgcgagccag gcgctggccg aagtatcacg aatccatgcc gacgctatcg aacgccgttt
      361 gcacgcgacc tttgccgccg tcgccgatgg ggtcagcatt ttcgatgcac atttaaacct
      421 ggtggaatgg aacgaggcgt ttccagaacg ttccggagtc gatggcaatc ttattcatcc
      481 cggtatggca atggaagagg ttttgcgcag ccaggctgaa gccgggtatt tcggtgagat
      541 caaagatgtc gaggccgaag tggaccgacg gatcgctctg ctccgcgcag ggaattttgg
      601 cgccagcctc agttttcaaa ctgccgcaag ggttatcgaa ttacggtgcc ggccgttggc
      661 cgacggtggt ttcgtcgccc tttataccga cgtcactgag gcgcggcagg ttcggcaggc
      721 gctctgtgac acccgggcgg cgctgggtcg cgaacaatcc tcgcgcaggc ggttgcttga
      781 ggtgatcgcg ttcgaactca acgtgcgcag ggctgcactg gtgcgctcga ttgaccggct
      841 gcggggcatt gatgtgccaa ccagcatgct cgagccattg cgtggcgtag gcaaggatct
      901 ggctggactg gcgatcgatg ccaccgagct gccccgcatg gaagccagca cactggtatt
      961 gcagccggcg ttgatcgaat tgcgcccgct gctgcgagac gttgtcgatg aaatccgacc
     1021 ggcagcacgg gatttcggca tcacggtgta ccaggtcgtg gatgaggacg tgcccaccga
     1081 actcgttgcc gacgcaaacc ggatacgcca gattgcaggc gtgctgctgc atgaggcgtt
     1141 gaggatcgcc gagccagata cgatgtggtt gctggcggac ggcggcggag acgactgcaa
     1201 aggcgcgatc gcgctgcgtt taaccattcg aggcttcggc acgccgatcc ccgaggagat
     1261 acaggacgcg atgtttcctg ccctccggga tgtcgcggtg ccggccaatt ctgacaccac
     1321 cccgggacgc tttcccggca ctggttttgg tccggcgatt gctcgccatc tgacagcgct
     1381 gatgggcggg cagctatcct gcgagacatg gtcagcgatt gacggtcgta ccggcaatga
     1441 tttcatcctc acccttccgt ccgacctgtt acctgggcag cgcggccgag ggcccggtct
     1501 ggcgaccgcc gaaggaaaac cgttaccgcg cacacggatt ttgttggtcg gagcgacaac
     1561 gggtctgcgg atggctgcaa agaccatgct gcaacgcgat ggccatatgg ttgataccgt
     1621 cgctaccaat gatgctgcac ttcaggcaat gcgccaggtt ccgtacgaca ttgccttcat
     1681 cgatagcgtg ctgccggatg catccgccga gggtgccctg gcatccattc gcgaccttgc
     1741 cggaccggcg cggatcttgc cggtgatctt actggctcag ccgcatgaca acgccgatga
     1801 atctccctgg cgtgaatccg gcgccgatga cgtgcttgct gcgaatccga ccttggagga
     1861 ctttagcaac accattcgtc gccatgtgtg gctcagcatg tcattcaaaa tcgagcctgg
     1921 gtcctcaacc gatccggttg atgactatga ggaggggata ccgatcctgt cagccgagcg
     1981 aattatggaa ttgcgcgcca acctgccgcg cgatgaactg ctcgatatgg tcga
//
LOCUS       DATAVD010001008         1538 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_98658, whole genome shotgun sequence.
ACCESSION   DATAVD010001008 DATAVD010000000
VERSION     DATAVD010001008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98658"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..149)
                     /locus_tag="VHX39_19275"
     CDS             complement(<1..149)
                     /locus_tag="VHX39_19275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3993321.1"
                     /translation="MTTVDEARNKSVRSLVPARLDRLPWVRFHWLIIVGLGVSWILDG
                     LEIQIV"
     gene            complement(1305..>1538)
                     /locus_tag="VHX39_19280"
     CDS             complement(1305..>1538)
                     /locus_tag="VHX39_19280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993322.1"
                     /translation="RRACRRLSAIRASVRTTTRMEVAMAVLELQEVVCANDGCSRRFN
                     LGWDGICEDCNLVAQDHETGLHTQPLVDCRNCW"
BASE COUNT          293 a          486 c          493 g          266 t
ORIGIN      
        1 acgatctgga tctccaggcc gtcgaggatc caggaaacac cgagcccaac gatgatcagc
       61 caatgaaatc gcacccacgg cagccggtcc aggcgcgccg ggaccaggct acggaccgac
      121 ttgttcctgg cttcatcgac agttgtcatc gtccacctcg cggcacactc tcaatcgatg
      181 gggccgcact gagtgcccgg ccgcaattct cgtacccagc tggcggccgg ttcacacgtt
      241 gcttgggctc ggcaggagaa ggaacgacgc accgcggcgc gactaagccg acttaatctc
      301 atactcgtcg gtggccaagg actgcgctta ggtaaggtgg cggcccaacc gcggtggcca
      361 tgctggacga gttccggcaa gggaccgacg tcgaagtcga tctaatgatg gccgtcgcag
      421 acattcggac ctttttgcaa cgccccgcga ggcagaccgc ttgggtggag tggagtggat
      481 ctcttctggt agcggctggg ccccgggtct cgccgcctgc cgttcgccgg cggctcatcc
      541 gtagccttcc ttgatgacag gctgacccat ggctgatctg catggagttc gaagaccgcg
      601 gccaacgctt cgcaagagaa gcgcggcagt tgcgcccaca cggtatgtgc gacgccccga
      661 acaccccgct tagcccaaac gcacgtgcgt cgtgcgcttc ggacatcgac ataacggctg
      721 tcacccaggg tgtgatcaga agcacccatg actgatcaga acgcggcgac cgacaagtct
      781 cggagcggtg ggtgccatga cgggcagccc ggcgacgcca gagccgccac aacggcaatc
      841 cggtgggcga tgccgagaac gcgccggccg gatgagccat ccaggggaag cgatctctga
      901 tgacgcggat cgggctaata cacgtagcac cgagtcgtga ctccggagcg cagcgcccag
      961 acgagggttc ccgtgggcat tccataacgt ctatgaccgg gtcgcggtgg cattgtccct
     1021 cccggacagg cccgaagatt gtgcgagtat cgccgcacga ccttcagtgt tagtccggta
     1081 gcgcgtgttt gaccaaacgc gggggacggc gctgcgaccg cagaaaccaa agcctcgacc
     1141 ggcaacaatg gtcaggtcaa ctcggcatcc aaatggtgcg gatagtggca agtcaccgtc
     1201 cgcctgacgc gatctacgcg gcacggctcg gcggcctaag tccgcgcatc tttagcggct
     1261 gagcgggtga cctcggaggc gtggttgcct gtggggccgc gtggctacca gcagttgcgg
     1321 cagtccacga gcggctgggt gtgcaggccc gtttcatggt cttgggcgac gaggttgcag
     1381 tcttcgcaga tgccgtccca cccgaggttg aaccggcgcg agcatccgtc gttggcgcag
     1441 accacttctt gaagctccag cactgccatc gctacctcca tgcgtgtcgt cgttcgaaca
     1501 cttgcacgaa tggctgacag tctccggcag gcacgccg
//
LOCUS       DATAVD010001009         1898 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_98834, whole genome shotgun sequence.
ACCESSION   DATAVD010001009 DATAVD010000000
VERSION     DATAVD010001009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1898
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98834"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..386)
                     /locus_tag="VHX39_19285"
     CDS             complement(<1..386)
                     /locus_tag="VHX39_19285"
                     /inference="COORDINATES: protein motif:HMM:NF024485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX3993323.1"
                     /translation="MNLTLKVWRQSNADAAGRLETYEAKDILPDMSFLEMLDVVNEGL
                     IERGEEPIAFDSDCREGICGACSLVINGIPHGGNRGTATCQLHMRHFKDGQTITIEPW
                     RAKAFPLLKDLVVNRTAFDRIIQSGG"
     gene            complement(383..>1898)
                     /locus_tag="VHX39_19290"
     CDS             complement(383..>1898)
                     /locus_tag="VHX39_19290"
                     /inference="COORDINATES: protein motif:HMM:NF005749.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fumarate reductase/succinate dehydrogenase
                     flavoprotein subunit"
                     /protein_id="HEX3993324.1"
                     /translation="ARDYGGLLDTRSFGGVQVSRTFYARGQTGQQLLLGAYQALERQI
                     AAGTVTMHTRHEMLELIVSGGRARGIIVRDMVTGEVETHLADAVVLASGGYGNAFYLS
                     TNAKGCNVTATWRAHRKGALFANPCYTQIHPTCIPVSGDHQSKLTLMSESLRNDGRVW
                     VPKRKEDCGKPPASIPEADRDYYLERKYPSFGNLAPRDISSRAAKEVCDEGRGVGPGG
                     RGVYLDFADAIKRLGEDKIRERYGNLFDMYEKITGENAYRLPMRIYPAVHYTMGGTWV
                     DYNLMSTVPGMFVVGEANFSDHGANRLGASALMQGLADGYFVLPYTIGNYFASAKQAK
                     PSASHPEFKKVEENIRSLTNKLLAIKGKRTVTSFHRELGKLLWEKCGMARNEAGLKEA
                     LQRIPELREEFWTNVNVTGKNGELNQNLEYAGRVADFMEFAELLCLDALDRKESCGGH
                     FRTEYQTPDGEAQRDDEHFAYAAAWEYQGPDKPPALHKEPLVYDEVHMSTRSYK"
BASE COUNT          333 a          595 c          570 g          400 t
ORIGIN      
        1 aacccgccgg actggatgat ccggtcgaag gcggtgcggt tcaccaccag gtcttttaac
       61 agcggaaacg ctttcgcgcg ccagggctcg atcgtgatgg tttgcccgtc tttgaaatgc
      121 cgcatgtgaa gctggcaggt cgcggtgccg cgatttccgc cgtgcggaat gccgttgatg
      181 accagcgagc acgcgccgca aatgccttcc cggcaatcgg aatcaaaggc aatcggctcc
      241 tcgccgcgct cgatgagccc ctcattcacc acgtcgagca tttcgaggaa cgacatatcc
      301 ggcagaatgt ccttcgcctc gtaggtctct aaccggcccg ccgcgtccgc attgctttgc
      361 cgccagactt tgagggttaa attcatttgt aactcctcgt gctcatgtgc acttcgtcgt
      421 aaaccagcgg ttccttgtgc aatgccggag gcttatcggg tccctgatat tcccacgcgg
      481 cggcgtaggc gaaatgttcg tcgtcgcgct gcgcttcgcc gtcgggtgtc tggtattccg
      541 tccggaaatg gccgccgcag gattctttcc gatccaacgc gtcgagacag agcagttcgg
      601 cgaattccat gaagtccgcc acgcgcccgg cgtattcgag gttctggttc aactcgccat
      661 ttttgccggt gacgttgaca ttcgtccaaa attcctcgcg cagttcggga atgcgctgga
      721 gcgcttcttt caacccggct tcattgcgcg ccatgccgca cttttcccag agcaacttgc
      781 ccaattcgcg gtggaaggaa gtcaccgtcc gcttgccctt gatcgcaagc agcttgttcg
      841 tgagcgaacg aatgttttcc tcgactttct tgaactccgg atggcttgcc gaaggcttgg
      901 cttgtttggc tgaggcgaaa taatttccaa tcgtgtacgg caggacgaaa tagccgtccg
      961 ccaaaccctg catcaacgcg ctcgcgccga gccggttcgc gccgtggtcc gagaaattcg
     1021 cctcgccgac gacgaacatg ccgggcaccg tgctcatcaa attgtaatcc acccacgtgc
     1081 cgcccatcgt gtaatgcacc gccggataaa tgcgcatcgg gaggcgatac gcgttttcgc
     1141 cggtgatctt ttcgtacata tcaaacaggt tcccgtaacg ttcgcgaatc ttgtcctcgc
     1201 caagccgttt gatggcatcc gcgaaatcga ggtaaacgcc ccggccgccc ggcccgacgc
     1261 cgcggccttc atcgcaaacc tctttggccg cgcgggagga aatatcgcgc ggagcgaggt
     1321 tgccgaagct cggatatttg cgttcgagat aataatcgcg gtcggcttca ggaatggagg
     1381 cgggcggttt gccgcaatcc tcttttcgtt tcggcaccca gacccggccg tcattgcgca
     1441 gcgactccga catgagcgtc agcttggact ggtggtcgcc gctgactggg atgcaggtcg
     1501 ggtggatctg ggtgtagcag gggttggcga acagcgcgcc cttgcggtgc gcccgccagg
     1561 tcgcggtgac gttgcagccc ttggcgttgg tcgacaggta gaacgcgttg ccgtacccgc
     1621 ccgaggccag cacgaccgcg tccgccaggt gcgtctcgac ctcgccggtc accatgtcac
     1681 gcacgatgat gccgcgtgcc cggccgccag agacgatcag ctccagcatc tcgtgccggg
     1741 tatgcatggt cacggtgccg gccgcgatct gccgctccag ggcctggtag gcgcccagca
     1801 gcagctgctg gcccgtctgg ccgcgggcgt aaaacgtccg tgacacctgc acgccgccga
     1861 acgagcgggt gtcgagcagg ccgccgtagt cacgggcg
//
LOCUS       DATAVD010001010         3081 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1398145, whole genome shotgun sequence.
ACCESSION   DATAVD010001010 DATAVD010000000
VERSION     DATAVD010001010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3081
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1398145"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..820)
                     /locus_tag="VHX39_19295"
     CDS             complement(<1..820)
                     /locus_tag="VHX39_19295"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEX3993325.1"
                     /translation="MPTTSPAGDAFLRPWNPNSWRDCPIRQVPTYPDVTKLQDMEARL
                     GKYPPLVFAGEARRQKAHLALAAEGKAFVLQGGDCAESFSDFTANIIRDTFRVLLQMA
                     VVLTFGASLPVVKIGRMAGQFAKPRSSDTETQGNMTLPSYRGDIINGPEFSEASRIPD
                     PARMEFGYFQSASTLNLLRAFSSGGYADLHEVHRWNLDFVERSPLVERYQDLASRIDE
                     TLSFMAACGMTSTTTRDLRETDFYISHEALLLPYEQALARVDSTTGDWYGCSAHF"
     gene            1078..2007
                     /locus_tag="VHX39_19300"
     CDS             1078..2007
                     /locus_tag="VHX39_19300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3993326.1"
                     /translation="MLNALAAGITIGCIYGLMCIGLGLIFGIMRIVNFAQGELLMLGM
                     FSSLYLVTGAGALAFLGPYIGPFVGALLAGPIVFAFGALLHKFLIARVSGLRTAGSID
                     DGHFGQLVVTLGISLILQNGGLILFGSSPMTVRTPLASSAIEIGPIYGDATVFLNKAR
                     MVACAIAIIIAVSLYLVLEYTRMGKALRAAADNPTAATYMGIDTDKTYRLAFALGCGI
                     TAIAGGLMATYLSFGPFIGLDYVIIMYSGVVLGGMGSILGAFWGGLTVGFVQQCSALV
                     LPPQLQNAAIFVVFLLIVLLRPQGLFGRSAERA"
     gene            2122..>3081
                     /locus_tag="VHX39_19305"
     CDS             2122..>3081
                     /locus_tag="VHX39_19305"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3993327.1"
                     /translation="MRYGSAPRLKKDLITLGIVSVAYLGASAFVTNSYYQLIMTLVPI
                     WAIFGVSWNILSGYGGQLSFGHASFFGIGAYVVTLALVYWNLTPWLGIPLGMIVAGFA
                     AVLIGLPTFRLRGHYFALSMLAYPLAILYFLQYLGFQEMSLPMHREHPAAFLEFTDPR
                     LYTVVSVGLLIFGVFTCMLVENSRFGLALLAIRQNELAAEAAGINTRLWKMRALVVSG
                     MIAASAGGFYACVLLVVTPDSVFGMLVSAQAVVVTLFGGVASVWGPVIGAAILVPLAE
                     SLNVELGNILPGIQGVVYGAAIIIIMLAAPEGLFWTVRDRLFRR"
BASE COUNT          502 a         1011 c          942 g          626 t
ORIGIN      
        1 ggaaatgcgc cgagcagcca taccagtcgc cggtggtgga atcgacgcgg gccaacgcct
       61 gctcgtaagg cagcagcaat gcttcatggc tgatgtagaa atccgtctcc cgcaggtcgc
      121 gggtggtggt gctggtcatg ccacaggcgg ccatgaacga cagcgtctca tcgatccgcg
      181 acgccaggtc ctgatatcgt tccaccagcg gcgagcgctc gacgaaatcg aggttccacc
      241 ggtgcacctc gtgcaaatcg gcatacccgc ccgaggaaaa cgcgcgcagc aggttcagcg
      301 tgctggccga ctggaaatag ccgaactcca tccgagcggg gtcggggatt cgggacgcct
      361 cggaaaattc cggcccattg atgatgtcgc cccgatagct gggtagcgtc atgttcccct
      421 gcgtctcggt gtcggatgac cgcggcttgg cgaactgtcc cgccatgcgg ccgatcttca
      481 ccaccggcaa cgacgcgccg aacgtcagca ccaccgccat ctgcaacagc acacggaacg
      541 tgtcgcgaat gatgttggcg gtgaagtcgg aaaaactctc ggcgcagtcg ccgccctgca
      601 gcacgaacgc ctttccttcc gcggccagtg ccagatgcgc cttctggcgg cgcgcctcac
      661 cggcgaaaac cagcggcgga tatttgccca gccgggcttc catgtcctgc agcttcgtta
      721 cgtccggata ggtcggcact tggcgaatgg ggcaatcgcg ccacgaattc gggttccacg
      781 gacgcaggaa tgcgtctcca gcaggcgatg ttgtcggcat aaacggtctc ctcagcctgc
      841 tttatgtcgc caaaccgtcg aaatggctac tgccgccgga aaccaacagc cctgcccacg
      901 aaagaacgac ccattcaacc gctatcatga tgatgcatga taccctaatc cttcacggtc
      961 gcttgagcat gcggcgggta cccggtatga cacctcccga aacacaagca gcccccaacg
     1021 ggcggccggc ccggaggcag cggaaaccaa gtggacctcg aggttcttat cgagaatgtg
     1081 ctgaacgcgc tcgccgcggg catcaccatc ggctgtatct acggactgat gtgcatcggc
     1141 ctcgggctga ttttcggcat tatgcgcatc gtcaatttcg cccagggcga gctgctgatg
     1201 ctgggcatgt tctccagcct gtatctggtg accggagccg gcgcactggc gtttctcggc
     1261 ccctatatcg gcccgttcgt cggtgcgctg ctcgccggcc cgatcgtctt cgctttcggt
     1321 gcgctgctgc acaaatttct catcgcccgg gtttccggcc tgcggaccgc cgggtcgatc
     1381 gacgacgggc atttcggcca gttggtcgtc accctcggca tctcgctgat cctgcagaac
     1441 ggcggcctga tcctgttcgg ctccagcccg atgaccgtgc gcaccccgtt ggcctccagc
     1501 gcgatcgaga tcggtcccat ctacggcgac gccaccgtct tcctgaacaa ggcgcgcatg
     1561 gtcgcctgcg ccatcgccat catcatcgcc gtttcgctgt acctggtgct ggaatacacg
     1621 cggatgggca aggcgctgcg agcggcggcc gacaacccca ccgccgccac ctatatgggc
     1681 atcgacaccg acaagaccta tcgtctcgcc ttcgcgcttg gctgcggcat caccgcgatc
     1741 gccggcgggc tgatggcgac ctacctgtcg ttcggtccgt tcatcggcct cgactacgtc
     1801 atcatcatgt attccggcgt cgtgctgggc ggcatgggca gcatcctggg cgccttctgg
     1861 ggcgggctga ccgtcggctt cgtgcagcaa tgttcggccc tggtgctgcc gccgcaattg
     1921 cagaacgcgg cgatcttcgt cgtcttcctg ctgatcgtcc tgctgcgccc gcaaggcctg
     1981 ttcggccggt cggcggagcg ggcctgatgc ggccccgcat cgcggagcgt gcgtgatgaa
     2041 gccctgcatg cggagcgtgc gtgatgagac cccgcatcgc ggagcgtgca taatgcgacc
     2101 ctgcatcgcg gagcgtgtat aatgagatac ggttccgccc cccggctgaa aaaagacctg
     2161 atcacgctgg gaatcgtatc ggtcgcgtat ctcggcgcat cggcgttcgt caccaacagc
     2221 tactaccagt tgatcatgac cctggtgccg atctgggcga tcttcggcgt gtcgtggaac
     2281 atcctgtccg gctatggcgg gcagttgtca ttcggacacg catcgttctt cggtatcggc
     2341 gcctatgtgg tgacgctggc actggtctac tggaacctca cgccctggct gggcattccg
     2401 ctcggcatga tcgtcgccgg cttcgccgcg gtgctgatcg gattgccgac gtttcgccta
     2461 cggggccact atttcgcgct gtcgatgctc gcctacccgc tggcgatcct ctacttcctg
     2521 caatatctcg gcttccagga aatgtcgctg ccgatgcacc gggaacaccc ggccgcgttc
     2581 ctggaattca ccgatccccg cctctacacc gtggtgtccg tcggcctgct gatcttcggc
     2641 gtcttcacct gcatgctggt ggaaaattcc cgcttcggcc tggccctgct ggcgatccgc
     2701 cagaacgaac tcgcggccga ggcggcaggc atcaacaccc gcctgtggaa gatgcgcgct
     2761 ttggtcgtgt ccggcatgat cgcggcctcg gccggcggtt tctacgcctg tgtgctgctg
     2821 gtggtgacac ctgattccgt gttcggcatg ctggtctccg cccaggcggt cgtcgtcacc
     2881 ctgttcgggg gggtcgcgtc ggtctggggc ccggtgatcg gtgccgcgat cctggtccca
     2941 ctcgccgaat ccctgaatgt ggagctggga aacatcctgc ccggcatcca gggcgtggtg
     3001 tacggcgcgg cgatcatcat tatcatgctg gccgcacccg agggattgtt ctggaccgta
     3061 cgcgaccgtt tgttccgacg c
//
LOCUS       DATAVD010001011         2361 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1586876, whole genome shotgun sequence.
ACCESSION   DATAVD010001011 DATAVD010000000
VERSION     DATAVD010001011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2361
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1586876"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..608)
                     /locus_tag="VHX39_19310"
     CDS             complement(<1..608)
                     /locus_tag="VHX39_19310"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3993328.1"
                     /translation="MTPLRGMRILSVEQYAAGPYGTMFLAELGAEVIKVENAQGGDPA
                     RYTGPHFAAPGEGEYFHTWNMGKQSVTLDLKSDEGRAAFHSLAAGADAVVNNLRGDQA
                     RKLGLDYAALKSVNPALVCLHISAYGRDNDRASWPGYDYLMQAESGLMSITGEPDGPP
                     TRYGASGIDYMTGMTGMVGLLSCLLSARATGQGCDVDTCLFDV"
     gene            complement(605..1780)
                     /locus_tag="VHX39_19315"
     CDS             complement(605..1780)
                     /locus_tag="VHX39_19315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014200019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3993329.1"
                     /translation="MNDSPAGSSFDPRDEPLLLETIGRWVERDIRPIVKEFDHADRWP
                     DAVVEQMRQFGLFGATISPEYGGLGLPATTYAKIVMRISSVWMAITGIFNSHLMLALA
                     IEKFGTTAQKQTWLPLLAAGELRGGLALTEPDAGTDLQGIRMTARRDGGDYVINGTKT
                     WISNGIKGSVFALLVKTNPGAEPRHKGMSLFIAPSGPGFTVGRKLEKLGYKSIDSAEL
                     VFEDYRISADYLIGGVEGQGFYQATGGLELGRINVASRGVGIAEGALQLATDYAQIRK
                     TFGKPIAEHQAIQLKLGEMVTRARAARLLTLDAAATFDRGERCDLEAGMAKYFASEAA
                     LENSIESMRIHGAYGYSKEYDIERLYRDAPLTCIGEGTNEMQRMIIARQWIKRSATV"
     gene            2155..>2361
                     /locus_tag="VHX39_19320"
     CDS             2155..>2361
                     /locus_tag="VHX39_19320"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX3993330.1"
                     /translation="MTRQTAPRQEPKKAARVLRYRSLYEAVRGDIASGALQAGDKLPT
                     EDALCRSHAVSRHTVRSALRDLAED"
BASE COUNT          393 a          752 c          776 g          440 t
ORIGIN      
        1 acgtcgaaca ggcaggtatc gacgtcgcag ccctggccgg ttgcccgcgc cgacagcaga
       61 caggacagca ggccgaccat gccggtcatg cctgtcatgt agtcgatgcc ggaggcgccg
      121 taccgcgtgg gcgggccgtc cggctccccg gtgatgctca tcagaccgga ttcggcctgc
      181 atcagataat cgtagccagg ccaggacgcc cgatcgttgt cgcgaccgta ggccgagatg
      241 tgcaggcaga ccaacgccgg attgaccgat ttcagcgcgg cgtagtcgag gccaagcttc
      301 cgtgcctggt ccccgcgcag gttgttgacc accgcgtcgg caccggcggc caggctgtgg
      361 aacgcggccc gcccctcgtc ggatttcaaa tccagcgtga cgctctgctt gcccatgttc
      421 caggtatgaa agtattcgcc ctcgcccggg gccgcgaaat gcggcccggt gtagcgcgcg
      481 gggtcgccac cctgcgcgtt ctcgaccttg atgacctcgg cgcccagttc ggccaggaac
      541 atggtgccat acgggccggc ggcgtattgc tcaacggaca gaatccgcat gcctcgaagc
      601 ggtgtcatac ggttgcgctc ctcttgatcc attgtctggc gatgatcatg cgttgcatct
      661 cgttggtgcc ctcgccgatg cacgtcagcg gtgcgtcccg gtacaggcgc tcgatgtcgt
      721 attccttgga atagccgtag gcgccatgga tgcgcatcga ctcgatgctg ttttccagcg
      781 cggcttcgga ggcgaagtac ttcgccatgc cggcctccag atcgcagcgc tcgcctcgat
      841 cgaacgttgc cgccgcatcc agcgtcagca gccttgccgc ccgcgcccgt gtgaccatct
      901 caccgagctt gagctggatg gcctggtgtt cggcgatcgg cttgccgaag gttttccgaa
      961 tttgcgcata atcggtcgcg agctgaagcg ccccttcggc gatgccgacg ccgcgggaag
     1021 cgacgttgat gcggcccagc tcaagaccgc cggtggcctg gtagaagccc tggccctcga
     1081 ccccgccgat caggtagtcg gcggaaatgc ggtaatcctc gaacaccagc tcggctgaat
     1141 caatcgactt gtagccgagt ttttccagct tgcggccgac cgtgaagccg ggcccggagg
     1201 gggcgatgaa caggctcatg cccttgtggc gcggttcggc tccggggttg gtcttgacca
     1261 gaagggcgaa gaccgacccc ttgatgccgt ttgagatcca cgtcttggtg ccgttgatca
     1321 cgtagtcgcc gccgtcgcgg cgtgcggtca tgcggatgcc ttgcagatcg gtgccggcat
     1381 ccggttcggt cagcgccagg ccgccgcgca gttcccccgc tgccagcaat ggcagccagg
     1441 tctgtttctg cgccgtggtg ccgaacttct cgatcgcgag ggccagcatc aggtgggagt
     1501 tgaagatgcc ggtgatggcc atccagacgc tggatatccg catcacgatc ttggcgtagg
     1561 ttgtcgccgg caggccgagt ccgccgtatt cggggctgat ggtcgcgccg aacaggccga
     1621 actggcgcat ctgctcgacc accgcgtccg gccagcggtc agcatggtcg aattccttga
     1681 cgatggggcg gatgtcccgt tcgacccagc ggccgatcgt ttcgaggagc agtggctcgt
     1741 cgcgcggatc gaaactgctg cctgccggac tgtcgttcat gcggaccgtg ccttcccatg
     1801 gtggtttttg agcatctgtg gttcaaatat tctgatttgt ccgtacaagt tacgcggatg
     1861 aaaacggcga gtcaatccgc gcccggccgg cagtcggagc caggtccgcg gcatggaatg
     1921 tccgtccctc gccagtggat tgaaatgcgc cggcgacgaa gttcgtgtag cttgaggttg
     1981 acccccgggg ccgttcgcgt gatgggaccc tcttgcctcg gcctggggac ggtggtgcca
     2041 tatgtccgga tacgtcacgt atcgaaagcg ccaaccgatg cgccctggca aagctgtccg
     2101 gaaccggggt agcaatacgc acgcgcgccc gcgaatccgg aaagaacggc cagcatgacc
     2161 cggcagacag caccgcgaca ggagccgaaa aaagccgccc gggtgctgcg ctaccgcagc
     2221 ctgtatgagg cggtgcgcgg cgacatcgcc tccggggcgc tgcaagccgg cgacaaactg
     2281 ccgaccgagg acgcattgtg ccgcagccat gcggtcagcc gtcacacggt gcgcagcgcg
     2341 ctgcgggacc tcgccgagga c
//
LOCUS       DATAVD010001012         2482 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2143051, whole genome shotgun sequence.
ACCESSION   DATAVD010001012 DATAVD010000000
VERSION     DATAVD010001012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2482
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2143051"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1088)
                     /gene="rapZ"
                     /locus_tag="VHX39_19325"
     CDS             complement(<1..1088)
                     /gene="rapZ"
                     /locus_tag="VHX39_19325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEX3993331.1"
                     /translation="MSETPGTRRVVFVTGLSGGGKASILHALEDVGYDAVDNLPLPLV
                     EELATRAGHDIAIGVDARTRGFDADRVVDMLANLRRNPDLLAKLVFAWADEATLLRRY
                     TETRRRHPLAQSGRVAEGIEIEQDLTAPLREAADLVIDTSELPLARLRQTIESHFRPR
                     GETNDPRLEVSLISFAYVKGLPKEADLVFDARFLRNPHYDPILRPRTGLDPEVGAYIR
                     EDQDCAAYLSGIIGLVDLVLPRFVHEGKKYATIAIGCTGGRHRSVYLVECLAAHLALR
                     LAAMHAAGESGLDWRQTVTHRELTLGKPELGGPTPEEAGLQGEVKLALTAESTTGGPS
                     SRARGEVPDSVRNDSQADGNGQKTTPVQA"
     gene            complement(1085..1522)
                     /locus_tag="VHX39_19330"
     CDS             complement(1085..1522)
                     /locus_tag="VHX39_19330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphatase C-terminal
                     domain-containing protein"
                     /protein_id="HEX3993332.1"
                     /translation="MGRAGARFHGSCVARDGAGVLLLGPSDAGKSDLALRLLGRGFVL
                     VADDQVDVIDGFAQAPGALAGMLEVRGIGIVRLPYLSDIKLYVVIELTEQSERLPHPE
                     RHAELDLPLVRLCASEVSAADRVALALDCALGRITQHAGAFTA"
     gene            1770..>2482
                     /locus_tag="VHX39_19335"
     CDS             1770..>2482
                     /locus_tag="VHX39_19335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEX3993333.1"
                     /translation="MITRSDIATAATRLAAFVRHTPVITVDGASLSLKYSVRLKLELL
                     QHTGSFKARGAFNRLFNATIPNTGVITASGGNHGAAVAYAAQTLGVNAEIFVPAGTPD
                     TKVKRIRSYGAQVILGGVSYADALEASRVRQEETGAVEVHAYDHADVLAGQGTVGREF
                     ERDAPDLTHVLVATGGGGLIGGIAAWYAGSVRIISVEPENCPTLATALQAGRPVDCAV
                     SGLAADSLGARRVGTSMFP"
BASE COUNT          490 a          772 c          760 g          460 t
ORIGIN      
        1 gcctgaaccg gcgtggtctt ttggccattg ccgtcagcct gactgtcatt acgcacgctg
       61 tccggcacct cgcctcgggc acgggacgat ggtcccccgg tagttgattc ggcagtaagc
      121 gccagtttta cctcaccttg caagcccgct tcttccggtg tcgggccacc caactccggc
      181 ttgcccaggg tgagttcgcg gtgcgtcacg gtctgccgcc aatccaatcc actctcccca
      241 gccgcatgca tcgcggcgag tcgtaatgcc aggtgggcgg cgagacactc caccaaatac
      301 accgatcggt gccgcccccc ggtacaccca atcgcgatgg tagcgtattt tttcccttcg
      361 tgcacgaagc gcggcagcac caggtcgacc aggccgatga tccctgacag gtaagccgca
      421 cagtcctgat cttcgcgtat ataggcgcca acttccgggt caagtcccgt tcgaggccgc
      481 aagatgggat cgtagtgcgg gttacgcaag aaccgcgcat cgaacacgag gtcggcctcc
      541 ttcggcaaac ctttcacata cgcaaaggag atcagcgaaa cctccaaccg cgggtcgttg
      601 gtttcgccac gcggacggaa gtgactttca attgtctggc gcaaacgagc gagcggcaat
      661 tctgaagtat cgatgaccag atcagctgct tcgcgcaaag gtgcggtgag gtcctgttca
      721 atttcgatgc cttccgctac gcgcccgctc tgggccaacg gatgacggcg ccttgtttcg
      781 gtataacgcc ttaacagcgt cgcctcgtca gcccatgcga agacaagctt cgcaagcaga
      841 tctgggttgc ggcggaggtt ggccagcatg tccacgacgc ggtcggcatc aaacccgcga
      901 gtccgtgcgt cgacgccgat ggcgatgtcg tggccggcgc gcgtggcaag ctcctccacg
      961 agaggcagcg gcagattatc gaccgcgtcg taaccgacat cttccagcgc atgcaggatc
     1021 gaggccttgc cgccaccaga caatcccgtg acgaaaacaa cgcgacgcgt tccgggtgtt
     1081 tcgctcatgc cgtgaatgcc ccagcatgtt gcgtgatgcg tccaagcgcg cagtccagcg
     1141 cgagtgcaac gcggtcagct gccgaaacct ctgatgcgca taaacgcacc aagggcagat
     1201 ccagttccgc gtgacgttcc gggtggggca aacgttcgct ctgctcggtc agctcaatga
     1261 cgacatagag tttgatatcc gataaatacg gtagtcgcac aataccgatc ccgcgcactt
     1321 ccaacatccc ggccagcgcg cctggtgcct gagcgaaacc atcgatgaca tcaacctgat
     1381 cgtcggcgac gagaacgaag cctcggccca acaaccgtaa ggcgaggtcg gatttgccgg
     1441 catcggaagg cccaagcagc aaaacgccgg cgccgtcacg cgccacgcaa ctgccatgaa
     1501 accgggcgcc ggcgcgaccc atgtcagatc agcccgtcaa gccaatgacg caccgcatgc
     1561 tcctgtcgtg gccggtcgtg ggccgcccga taccgtttgg gagcggccgg cccggatgga
     1621 agcccgtacg caaaacgccg tgacatcact gtgatcccgg atcgcctcgg aagcaaagca
     1681 cgattttgcg ccgccgcaaa tcgggcagag ccgccagggg gccaattggc ttgcctggag
     1741 ggaccgcgcg tgccagcgtc cgccgtacca tgatcacgcg ttccgacatt gcaactgccg
     1801 cgacacggct ggccgcgttt gtccggcaca cgccggtaat aacggtcgat ggggcatctt
     1861 tgtcgctcaa atactcggtc aggttgaaac tggagttact acaacatact ggtagtttta
     1921 aagctcgggg ggcattcaat cgtttattca acgccacgat cccaaatacc ggtgtaatta
     1981 ccgcatctgg aggcaaccat ggcgcggcag tcgcttacgc tgcgcagacc ctcggcgtca
     2041 acgctgaaat attcgtgcct gcgggaacgc cggacaccaa ggttaagcgc attcgctcct
     2101 atggcgcgca ggtcattctt gggggtgtga gctatgcgga cgcgctcgag gcgtcgcgcg
     2161 tgcgccagga ggaaaccggc gcagtggaag ttcacgcgta tgaccacgcg gatgtacttg
     2221 ctggtcaggg aacggttggc cgggagttcg aaagggatgc gcccgacctg acccatgttc
     2281 tggtggccac cggcggcggc ggactgatcg gcggcattgc ggcctggtac gcgggttcgg
     2341 tacggatcat ctcggtcgag ccggagaatt gccccacgct ggcgacagcg ttgcaggctg
     2401 ggcggccggt agattgtgca gtgtccggac ttgccgcgga ctcgttgggg gcacggcggg
     2461 tgggcacgtc gatgtttccg at
//
LOCUS       DATAVD010001013         1906 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1215046, whole genome shotgun sequence.
ACCESSION   DATAVD010001013 DATAVD010000000
VERSION     DATAVD010001013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1906
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1215046"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..367)
                     /locus_tag="VHX39_19340"
     CDS             complement(<1..367)
                     /locus_tag="VHX39_19340"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3993334.1"
                     /translation="MLKIESRGVESKFWRYASPILALLLTGATSGLIFAGMGRPAGLT
                     VYTFLVAPLLQQDGLQALAVKAAPLIMMGVGLSLAYRANVWNIGTDGQFTLGAICGGG
                     LALAFPEAPSWVIFPAMMIV"
     gene            complement(360..1301)
                     /locus_tag="VHX39_19345"
     CDS             complement(360..1301)
                     /locus_tag="VHX39_19345"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3993335.1"
                     /translation="MCSAATIMRLGRNVARVIPAEKTVKELAEIMINMDLHAPTKRPQ
                     LQNGAQARLQLNQLTIRSPNHFGTDLKDISLSIAGGEILGIAGIAGNGQSELMDALSG
                     EILAGKPESVTIDNVPAGHLGPHERRRIRGCFVPEERNGHGAVTTMTLAENAFLSGFL
                     RNALVRFGVIDSKRTHDFANNIIKTFDVRTTGPKAEARSLSGGNLQKFLVGREVLQEP
                     SVLVINQPTWGVDAGAALAIHEAIMALARSGTAVMIISQDLDEIFVLADRIAVIAGGR
                     ISEPVLTRDATIESIGRLMGGTATTEAVAEERQPIHA"
     gene            complement(1250..>1906)
                     /locus_tag="VHX39_19350"
     CDS             complement(1250..>1906)
                     /locus_tag="VHX39_19350"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3993336.1"
                     /translation="PMAPLLQMTGMTKQYPGCLANDHVSLTIERNQIHALLGENGAGK
                     STLVKIIYGVVRPDEGEIMWEGQPVAIQNPGQAQRLGVGMVFQHFSLFEALNVTENIA
                     LGLGSKEERVGLRERIIKVSTEYGLPLDPDRVVHDLSVGERQRIEIVRCLLQNPKLLI
                     MDEPTSVLTPSEVRTLFVTLRRLAAEGCSILYISTSWRKCGLCVLPPPSCVWAATSRA
                     "
BASE COUNT          381 a          567 c          573 g          385 t
ORIGIN      
        1 cgacaatcat catggccgga aagatcaccc atgaaggtgc ctcagggaac gccaatgcaa
       61 ggccgccgcc gcagatggcg ccgagggtga actgcccgtc cgtaccgata ttccacacat
      121 tcgcacggta ggcgagcgac agtccgacgc ccatcatgat cagcggcgcc gccttgacgg
      181 ccaaagcctg cagaccatcc tgctgcagta atggtgcgac caaaaacgtg taaacggtca
      241 ggccggcagg ccgccccatg ccggcgaaaa tcagtccgga tgtcgctccg gtcagcagca
      301 acgcaaggat cggcgaggca taacgccaga atttcgattc aacgccgcgc gattcgattt
      361 taagcatgaa tgggctgtct ttcctctgcg accgcttccg tcgtggccgt gccgcccatc
      421 aatcgaccga tcgactcgat cgttgcatcc cgcgtcagta ccggctccga gatgcggcct
      481 ccggcaatca ctgcaatgcg atcggcgagg acaaaaattt cgtcgagatc ctgcgagatg
      541 atcatcactg cggtgcccga gcgagccagc gccatgatcg cctcatggat cgccagagca
      601 gcaccggcat ccacacccca cgtcggctgg ttaatcacca gaacactggg ttcctgcaaa
      661 acctcccgtc cgaccaggaa tttctgcaga ttgccaccgg agagcgagcg ggcctcggcc
      721 ttcggaccag tggtacgcac gtcgaacgtc ttgatgatgt tattggcaaa gtcatgggtg
      781 cgcttactgt cgatcacccc gaagcgcacc agggcattgc gcagaaagcc tgatagaaaa
      841 gcgttttcgg cgagcgtcat cgtggtgacc gcgccgtgcc cattacgttc ctcgggcaca
      901 aagcagccgc ggatgcggcg ccgctcatgt gggcccagat gaccggcggg aacgttgtcg
      961 atcgtgacgc tttcgggttt gccggcaagg atttctccgg acagggcatc catcagttcg
     1021 ctttggccat tgccggcgat gccggcgatg ccgaggatct cgccaccggc aatcgacagc
     1081 gagatgtctt ttagatcggt accaaaatgg ttcggcgatc ggatcgtcaa ttggttcagt
     1141 tgcaggcggg cctgcgcacc gttctgtaac tgcggtcgtt tggttggcgc gtgcaggtcc
     1201 atgttgatca tgatttccgc cagttccttg acggtctttt cggccgggat cacgcgcgcg
     1261 acgttgcggc ccagacgcat gatggtggcg gcagaacaca aagcccgcac ttcctccagc
     1321 ttgtgctgat gtagaggatg gagcagcctt ccgcggccag ccgtcgcaag gtcacgaaca
     1381 aggtgcgcac ctcggacggc gtcagcaccg aggtcggttc gtccataatc agaagtttcg
     1441 ggttctgcag gagacaacgg acgatttcga tgcgttggcg ttcgccgacc gacaaatcgt
     1501 gcacaacccg gtcggggtcg agcggcaagc cgtattcggt ggagaccttg atgatgcgct
     1561 cccgcaatcc gactcgttct tctttggaac caaggccaag cgctatgttt tcggtgacgt
     1621 tcaatgcctc gaacagcgag aaatgctgga ataccatgcc gacgccgaga cgttgcgcct
     1681 ggcccgggtt ctggatggcg acgggttggc cttcccacat gatctcgccc tcgtcgggcc
     1741 tgaccacgcc atagatgatt ttgaccagcg tgcttttacc ggcaccgttt tcacccagca
     1801 gagcgtggat ctggttgcgt tcgatggtga gggatacgtg gtcgttggcg aggcaaccgg
     1861 gatactgttt ggtcatcccg gtcatttgca gcaggggcgc cattgg
//
LOCUS       DATAVD010001014         5160 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2888720, whole genome shotgun sequence.
ACCESSION   DATAVD010001014 DATAVD010000000
VERSION     DATAVD010001014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5160
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2888720"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..950)
                     /locus_tag="VHX39_19355"
     CDS             complement(<1..950)
                     /locus_tag="VHX39_19355"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008495137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEX3993337.1"
                     /translation="MLPPAPSHRILIVTDAWKPQVNGVVRTLTTVVHELQAMGHIVNV
                     IGPDRFRTLPCPTYPDISLSLLPRRRLIRMIEAFNPDALHIATEGPLGLAARSWAKRT
                     GFAFTTAFHTRFAEYVKARTGLPVRPIYAWMRRFHAAGQGTMVATQSLRDELSARGFR
                     NIRSWSRGVDLDLFKPYPRDEFAHLPGPIFIYVGRVAVEKNIGTFLDLNLPGSKVVVG
                     GGPQLASLQRDYPKVTFTGPRYGEALARAYSGADVFVFPSRTDTFGLVILEALACGTP
                     VAAFPVTGPKDVLSHAVGKIGSVSEDLRVAALDALTADRSA"
     gene            complement(979..1797)
                     /locus_tag="VHX39_19360"
     CDS             complement(979..1797)
                     /locus_tag="VHX39_19360"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEX3993338.1"
                     /translation="MNAMSHIGAPTDYRTIFISDAHLGTRGCRSEFLADFLKKSKCHH
                     LFLVGDIIDGWRLRKSWYWDESHDDVLKQIVRHARAGADVTYIPGNHDEMFRNWLPIG
                     LEICGIKMRRESEHTTADGKRLLVMHGDEFDSVVRYARFLALLGDWAYTVALVANRWF
                     NAIRRRLGYPYWSLSAWLKRQVKEAVKAIDRFETALASEARRRGFDGVVCGHIHHAEI
                     RDVQGVLYLNDGDWVESCTALVEHHDGRLELIDWAELNRLSFFAPRQSRVPEAA"
     gene            2000..2869
                     /locus_tag="VHX39_19365"
     CDS             2000..2869
                     /locus_tag="VHX39_19365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010665861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEX3993339.1"
                     /translation="MVIVFNPVAGRRRAHLLWRVLDVLVANGVRLDLAETHCAGHAEA
                     LAREAAGRGEAMVVAAGGDGTIAEVANGLMGSTARLGVIPLGTANVLAHELGLPFAPR
                     SVAAALAFGRTCTLWPGQANGPDGARLFVQMLGVGFDAHVVHNLPFPLKKVFGKGAYV
                     MQSVRELARYKFPAIRMRIDNVETEAASVIVSKGTLYGGSFRLAAEAVPSDPGFSVVL
                     FDRSGPGAAMMYGAALPLNLLGRAPGVRHIRARRVDFLQNEAAPAQTDGDSAGQAPLW
                     VSDAPGPIQVVMG"
     gene            complement(2829..4463)
                     /locus_tag="VHX39_19370"
     CDS             complement(2829..4463)
                     /locus_tag="VHX39_19370"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEX3993340.1"
                     /translation="MANRNVLWIMCDQLRFDYLSCYGHPHLHTPNIDALAARGVRFTN
                     AYVQSPVCGPSRMSSYTGRYMRSHGANWNRFPLRVGEPTLGDHLAELGVRNVLVGKTH
                     MQADLEGMRRLGIDPASSLGVQIAECGFEPYERDDGLNPDPAPRVPYDDYLRAQGFDA
                     TNPWEQWANSAEAPDGTLLSGWLLEHADKPARIPEEHSETPYMTRRAMRFIEEAAVDG
                     RPWCLHLSYIKPHWPYIVPAPYHAMYGPSDIIPPIRSENEKRDPHPVYGAFMAARVSQ
                     TFSRDEVRQRVIPAYMGLIKQIDDQIGVLTRFLADRGLLDTTMIAFTSDHGDYLGDHW
                     LGEKDLFHNCSAKVPLIVVDPSPAADATRGTASNALVEAIDLVPSFIRYFGGEPKSHV
                     VEGRVLQPLLHGQPLPDWRHHVFSEYDYGTMPARRTLGTPVDASRLFMVFDGRWKYIH
                     AVGFRSMLYDLDTDPNELHDRGTDPACADVCVRLKDALLAWSLRDHNRITTPDARIAA
                     YSEASQLQSGIVIGFWDQAALHEATPSPPGSVPERR"
     gene            complement(4517..>5160)
                     /locus_tag="VHX39_19375"
     CDS             complement(4517..>5160)
                     /locus_tag="VHX39_19375"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX3993341.1"
                     /translation="PIAVGWHAVQHARLAPEDVPLVVGCGPVGLSVIAGLVLRNIHPI
                     IAADFSPARRALALKMGADIVIDPAETSPYDTWRQTATPPGYNDSRYAQLFGLGPKLR
                     PAVIFECVGIPGVIQQVMEGAPASARIVVVGVCMQTDRIEPFFGIVKQLNVQFVLAYT
                     AQEFAESLHHIAEGNIDVAPLVTGTVGLAGVSDAFATLANPEQHAKVIVDPWA"
BASE COUNT          929 a         1574 c         1701 g          956 t
ORIGIN      
        1 gccgaccgat ccgcggtcag cgcatccagc gcggccaccc gaaggtcttc actgaccgaa
       61 ccgattttcc cgacggcgtg gctaagcacg tctttcggtc cggtcaccgg gaacgcggcc
      121 accggcgtgc cgcaggccag cgcctccagg attaccaagc caaacgtatc ggtcctgctg
      181 gggaacacga acacatccgc gcccgaatag gcccgtgcca acgcttcgcc atagcgcggg
      241 ccggtgaatg tcactttcgg ataatcccgt tgcagcgacg ccagttgcgg accgccgccc
      301 acgaccactt tcgagccagg caaattcaga tcgagaaatg tgccgatgtt cttctccacc
      361 gccacccggc cgacatagat gaagatcggt cccggcaaat gggcgaactc atctcgtggg
      421 tacggtttga acagatccag atcgacccct cgcgaccagg atctgatgtt ccggaatccg
      481 cgtgcggata gttcatcccg caacgattgc gtggcaacca tcgtgccttg gccggctgcg
      541 tggaaccgcc gcatccaggc gtagatcggc cgcaccggaa ggccagtcct ggccttcacg
      601 tattcggcga accgagtgtg aaaggccgtg gtgaaggcaa atccggtgcg cttcgcccag
      661 cttcgcgcgg cgagaccaag cggcccttct gtggcgatgt gcagcgcgtc ggggttgaag
      721 gcctcgatca tgcggatcaa ccgccgacgc ggcaacaacg acagcgagat gtcaggatag
      781 gtcgggcatg gcagcgtgcg gaaccggtct ggcccgatca cattgacgat gtgacccatg
      841 gcctgaagtt cgtgcaccac cgtcgtcagt gtgcgcacga caccgttgac ctggggcttc
      901 cacgcatccg tcacgatcag gatgcgatgg gacggggctg gcggcagcat gtccgttatg
      961 tccgcgaggg gaatggtatc aggcagcttc cggcacccgg ctttggcgcg gcgcaaagaa
     1021 cgacagacgg ttcagttccg cccaatcgat cagttccaga cggccgtcgt gatgttccac
     1081 cagcgccgta caactttcca cccaatcacc gtcgttgagg tacagtacgc cctgcacgtc
     1141 ccggatctcg gcatggtgga tgtggccgca aaccacgcca tcgaagcccc ggcgacgggc
     1201 ctcggaggcc aacgcagtct caaaccggtc gatcgccttg accgcttcct tcacctgccg
     1261 cttcaaccag gcggacagcg accagtacgg gtagcccaag cggcggcgta tggcgttgaa
     1321 ccagcgattg gcgaccagcg cgacggtgta ggcccagtcg cccagcagcg cgagaaacct
     1381 ggcataacgc accacgctgt cgaattcgtc gccgtgcatc accagcaggc gcttgccgtc
     1441 ggcggtggtg tgctccgact cacggcgcat cttgatgccg catatctcca ggccgatcgg
     1501 cagccagttg cggaacatct catcgtggtt gccgggaatg taggtgacat cggcgccggc
     1561 gcgggcgtgg cggacgatct gcttcagcac atcgtcgtgg ctttcatccc agtaccagga
     1621 tttccgcagc cgccagccgt cgatgatgtc gcccaccagg aacagatggt ggcattttga
     1681 tttcttcagg aaatccgcca ggaattcgct ccggcagcca cgcgtgccaa ggtgcgcgtc
     1741 agaaatgaag atggtccggt agtcggtggg ggcgccgata tgggacatag cgttcattca
     1801 ggggaatcac ttttttgtct tgcagtcata gcgcagcaga tactgtgctt cccgcgccaa
     1861 agacgttaag attcgatgac gtaagcggtt tgtctggaat tttccaaaga tatcctgatg
     1921 gtcattgaac tgtcacggaa atgacattgg atggtggcac ccagtactat ttgccgccga
     1981 ggcaggtttc gattcgctga tggtcattgt cttcaatcct gttgccggac gccggcgcgc
     2041 ccatctgctg tggcgcgtgc ttgatgtgct ggttgccaat ggggtcaggc ttgatctcgc
     2101 ggagacgcac tgtgccggac acgccgaggc attggcgcgc gaagccgcgg ggcgcggtga
     2161 ggccatggtc gtcgcggccg gcggcgacgg caccatcgcc gaagttgcca acggattgat
     2221 gggctccacc gcccgcttgg gggttattcc gctggggacc gccaatgtat tggcgcatga
     2281 attggggctg ccgttcgctc ctcggtctgt cgccgcggcc ctggcgttcg gacgtacctg
     2341 cacgctgtgg ccagggcagg cgaacggacc cgacggcgcc aggctgttcg tgcaaatgct
     2401 tggcgtcggt ttcgatgcgc acgtggtgca taacctgccc ttcccgctga agaaagtatt
     2461 cggcaagggt gcttacgtga tgcagtcggt acgggaactc gcccgttaca aatttccggc
     2521 gatccggatg cgtatcgaca acgtggaaac cgaggctgcg agcgtcattg tcagcaaggg
     2581 cacgctgtat ggcggcagtt tccgcctggc cgcggaggcg gtaccgagtg atccggggtt
     2641 ctcggtcgtg ctgttcgacc ggtctggtcc gggcgccgcc atgatgtatg gcgccgcgct
     2701 gccgctgaac ctgctcggcc gggcgccggg cgtgcggcac atccgggctc ggcgggtgga
     2761 tttcctgcag aacgaggcgg cgccggccca gacagacggc gacagcgcag gccaggcccc
     2821 gctatgggtc agcgacgctc cgggaccgat ccaggtggtg atggggtagc ttcgtgcagc
     2881 gccgcctggt cccagaaacc gatgacaatc ccggactgca actgtgaggc ctcgctgtag
     2941 gcggcgatcc gcgcatctgg cgtggtgatc cgattatgat cgcgcaacga ccacgccagc
     3001 agcgcatcct tcagccgaac gcacacatca gcgcaggcgg gatcggttcc ccggtcgtgc
     3061 agttcgttcg gatcggtgtc cagatcatac agcatcgagc gaaaaccgac ggcgtggata
     3121 tatttccagc ggccatcgaa caccatgaac agccgggacg catccaccgg cgtgcccagc
     3181 gtccggcggg ccggcattgt tccgtaatca tattcggaaa agacgtggtg acgccagtcc
     3241 ggcagcggtt gtccgtgcag cagcggttgt aatacccggc cctccacgac gtgcgacttc
     3301 ggctcgccgc cgaagtatcg gatgaaactg ggtaccaggt cgatcgcctc caccagcgcg
     3361 ttgctggcgg tgccgcgcgt ggcgtccgcc gccggtgacg gatcgacaac gatcagcggc
     3421 accttggcag agcaattgtg aaacaaatcc ttctcaccca gccaatggtc gccgaggtag
     3481 tcgccgtgat cggaggtgaa tgcgatcatg gtggtgtcca gcaggccgcg atcggccaga
     3541 aagcgggtca gcacgccgat ctgatcgtca atctgcttga tcaggcccat gtaagccggg
     3601 atcactcgct gccgaacctc gtcgcgagag aatgtttgcg acaccctggc ggccatgaag
     3661 gcgccgtaga cggggtgtgg gtcgcgcttt tcgttctctg accggatcgg cgggatgatg
     3721 tcggacggtc catacatcgc gtgatacggg gcgggcacga tgtacggcca gtgcggcttg
     3781 atgtaggaaa gatgcaggca ccaggggcgg ccgtccacag ccgcctcctc gatgaaacgc
     3841 atcgcccgac gtgtcatgta gggggtttcg gaatgttcct ctggaatgcg cgcgggtttg
     3901 tcggcgtgtt ccagcaacca gccactcaac agcgtgccat cgggtgcctc ggccgagttc
     3961 gcccattgct cccacgggtt ggtggcgtcg aagccctgcg cgcgcagata gtcgtcgtag
     4021 ggcacgcgcg gtgcggggtc ggggttcagg ccgtcgtcgc gttcgtaggg ctcgaaaccg
     4081 cattcggcga tctgcacccc aagcgatgaa gcagggtcga tcccgagccg gcgcatgccc
     4141 tcgaggtcgg cttgcatgtg ggtcttgccg acaaggacgt tgcgcacgcc gagttcggcc
     4201 agatggtcgc caagggtcgg ttcgccgaca cgcagcggga aacggttcca gttggcgccg
     4261 tggctacgca tgtagcggcc cgtgtaggaa ctcatgcggg acgggccgca gacgggcgac
     4321 tgcacgtacg cgttggtaaa gcgcaccccg cgcgcggcca atgcgtcgat gttgggcgtg
     4381 tgcagatgcg gatggccgta gcagctcagg taatcgaacc ggagctggtc acacatgatc
     4441 cacaggacgt tgcgatttgc catgtttttt ttgcatccgg gttggaagcc gccggtcttc
     4501 gagtgccctc cctggctcat gcccagggat cgacgatgac cttggcatgc tgctccgggt
     4561 tcgccagcgt ggcgaacgcg tcgctgacgc cggccagtcc gacggtgccg gtgaccaggg
     4621 gggcgacgtc gatgttgccc tcggcgatgt ggtgcaggct ctcggcgaat tcctgcgcgg
     4681 tgtaggccag cacgaactgg acgttcagtt gcttgacgat gccgaagaac ggctcgatcc
     4741 ggtcagtctg catgcagacg ccgaccacga cgatacgggc ggaggctggc gcgccctcca
     4801 taacctgctg gatcacgccg gggatgccga cgcattcgaa gatcacggcc ggccgcagct
     4861 ttgggccaag gccgaacagt tgggcgtagc ggctgtcgtt gtagccgggc ggtgtcgcgg
     4921 tctgtcgcca tgtgtcgtac ggggaggtct ccgccgggtc gatcacgata tccgccccca
     4981 ttttcagcgc cagcgcacgg cgcgcggggg aaaaatcggc ggcgatgatc gggtggatat
     5041 ttctcaggac aaggccggcg atgacggaca ggccgaccgg gccgcaaccg accaccagtg
     5101 gcacgtcctc cggtgccaag cgggcgtgct gcacggcgtg ccagcccacc gcgatcggtt
//
LOCUS       DATAVD010001015         1859 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_99277, whole genome shotgun sequence.
ACCESSION   DATAVD010001015 DATAVD010000000
VERSION     DATAVD010001015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99277"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..250
                     /locus_tag="VHX39_19380"
     CDS             <1..250
                     /locus_tag="VHX39_19380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX3993342.1"
                     /translation="NGARTLEMTAGQLMTRAVQVAHPDTTEDQAMQMMTTGRFRHLPV
                     LDHDTLVGLISIGDVVKAKILQQDSVVESLTAYVAGSA"
     gene            complement(281..421)
                     /locus_tag="VHX39_19385"
     CDS             complement(281..421)
                     /locus_tag="VHX39_19385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993343.1"
                     /translation="MAFSIYDVVDDRDAYTFKTEAKTYKFTVFQTLRSTPDPFTLLVS
                     VN"
     gene            complement(672..1811)
                     /locus_tag="VHX39_19390"
     CDS             complement(672..1811)
                     /locus_tag="VHX39_19390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrpF domain-containing protein"
                     /protein_id="HEX3993344.1"
                     /translation="MPLLTLPAVFMRGGTSRAIMFHRKDLPEQSAWDPIFLAAMGSPD
                     PNGRQLNGMGGGISSLSKICILSPSTREDADIDYTFAQVQIREAAVDYRGNCGNMSSA
                     VGPFAVDEGIVRPNGDTAVVRIFNTNSGKIIRSTFALHDGKAATDGDLAIPGVAGTGA
                     PVRLDFMAPGGAGTGRLLPTGNVRDWLEIPGHGSIEVSMIDAARPCVIVRARDLGLTG
                     TELPETLDTNTPLLTRLEAIRRTAAIAMGLAANQDEARDSRSIPSIGFVAPPTDSPTL
                     SGETIHAKDVDLIARFISNGQPHRALPVTSSLCTAVAARITGTLVNEALQADPAGSIR
                     IGMPSGILTVGADVTRDAAGTWIAHSGAFYRTARRLFDGRIYVPH"
BASE COUNT          281 a          469 c          769 g          340 t
ORIGIN      
        1 caatggggct cgcacgctgg agatgaccgc ggggcagttg atgacccgag cggtgcaggt
       61 cgcgcatccg gatacgactg aggatcaggc gatgcagatg atgaccaccg gacggttccg
      121 gcatcttccg gtcctcgacc acgacacgct ggtcgggttg atcagcatcg gtgacgtggt
      181 caaggccaag attctgcaac aggacagcgt ggtcgagagc ctgaccgcgt atgtggcggg
      241 ttcggcctga ccggtcaggg ttgggccggt ttcgccgtgt tcagttgacg gagaccagca
      301 gcgtaaatgg atccggcgtt gaacggagtg tctggaagac ggtgaacttg tacgtcttgg
      361 cctccgtctt gaaggtatag gcgtcgcggt cgtccacgac gtcgtaaatc gagaacgcca
      421 tgtttccgtt ggtcctggtg aatttcaggg ttgccgtctg ccctcggccg gtggcgagcg
      481 tatagcaggg gaacggttcg tctgacccga cgcgaccgct gaggctgatg gaagaggtgc
      541 cgcgggcgaa gtgtatgggc gtgcagttgg tcggctgctg cgcgaatgcc tgggtgacgc
      601 cgaggagcgc ccaggcgatg gcaagaatgc gggacagtgg cgatcctttc ctgtttccgt
      661 gcgctggctg gtcagtgcgg cacgtagata cggccgtcga acaggcgccg ggcggtgcgg
      721 tagaaggcgc cgctatgggc gatccatgtg ccggccgcat cgcgtgttac gtcggcgcct
      781 acggtcagga tgccggacgg catgccgatg cggatcgaac cggccgggtc cgcctgtagc
      841 gcttcgttga ccagcgtgcc ggtgatgcgc gctgcgacgg cggtgcagag cgaggaggtg
      901 acgggcagcg cgcgatgcgg ttggccgttg gaaatgaatc tcgcgatcag gtcgacgtct
      961 tttgcatgga tggtttcacc tgacagggtc ggggaatccg tgggtggggc gacgaagccg
     1021 atggagggga tgctgcggct gtcgcgggct tcgtcctggt tggcggcgag gcccatggcg
     1081 atggcggcgg tgcggcggat ggcctccagc ctggtgagga ggggggtgtt ggtgtcgagc
     1141 gtctcgggca gttcggtgcc ggtcaggccg aggtcgcggg cgcggacgat gacgcagggg
     1201 cgggcggcgt cgatcatgga gacctcgatc gagccgtggc cggggatttc cagccagtcg
     1261 cggacgttgc cggtgggcag caggcggccg gtgccggcgc cgccgggggc catgaagtcg
     1321 agccggacgg gggcgccggt gccggcgacg ccggggatgg cgaggtcgcc gtcggtggcg
     1381 gcctttccgt cgtgcagggc gaaggtggag cggatgatct tgccggagtt ggtgttgaag
     1441 atgcggacga cggcggtgtc gccgttgggg cggacgatgc cttcgtcaac cgcgaacggg
     1501 ccgacggcgg aggacatgtt gccgcagttg ccgcggtagt cgacggcggc ctcgcggatc
     1561 tggacctggg cgaaggtgta gtcgatgtcg gcgtcttctc gggtggaggg ggagaggatg
     1621 cagattttcg agagggagga gatgccgccg cccatgccgt tcagttgacg gccgttgggg
     1681 tctgggctgc ccatggcggc gaggaaaatg gggtcccagg cggattgttc ggggaggtcc
     1741 ttgcggtgga acatgatggc tcggctggtg ccgccacgca tgaagacggc ggggagggtg
     1801 aggaggggca tgttgggtct ccctggacgg tggggtgggg agtgtagcag gtgggggtg
//
LOCUS       DATAVD010001016         2656 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3447143, whole genome shotgun sequence.
ACCESSION   DATAVD010001016 DATAVD010000000
VERSION     DATAVD010001016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2656
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3447143"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..194
                     /locus_tag="VHX39_19395"
     CDS             <1..194
                     /locus_tag="VHX39_19395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008852661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HEX3993345.1"
                     /translation="NVTFHGAGVNPLDDKYTVGFEASGHLKRSDFDINPNIPLVGDRV
                     NLVISAAFEKQDERDTSER"
     gene            206..802
                     /locus_tag="VHX39_19400"
     CDS             206..802
                     /locus_tag="VHX39_19400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004271964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEX3993346.1"
                     /translation="MPPARYTSVAVVLHWLLALGILGLLAIGLAMTQLRLTPMMQFSL
                     YQLHKSVGVTVLLLVIPRLIWRLLHRPPPMPDTMPRIEKRAAESTHIFFYFLMLGLPL
                     SGWALVSASVFNIPTVLYGVIPWPNMPVLSSLSNKAPVEAILKTLHAYGAWLLLAVLV
                     LHLGAVLRHQFILRDDVLRRMSLRPSSHGSVIARKEFQ"
     gene            799..1356
                     /locus_tag="VHX39_19405"
     CDS             799..1356
                     /locus_tag="VHX39_19405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004271963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HEX3993347.1"
                     /translation="MKGAATLAFLCLLSAGPAAAATWTVDPARSSLGFEGVQTGSPFQ
                     GKFDKFTAQIEFDPSKPEAGHVLVLIDMTSGHTGDTQRDESLPQSDWFDVKSHPQARF
                     EATGFRTKGGDHYEATGRLTVRGITRDCVLPFTLDISGDTAHAKGRVQILRTDFSIGQ
                     GPWASGQWVALQVGVDFDLTARRVL"
     gene            complement(1544..2329)
                     /locus_tag="VHX39_19410"
     CDS             complement(1544..2329)
                     /locus_tag="VHX39_19410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HEX3993348.1"
                     /translation="MTDPIRPVQEDELHAYVDNRLDATRRVEVESHLRANQVLQRRVA
                     GWGRQTEALRDALAFKLHEPVPSSLHLGRLLEQRAVRRQRGLFGNPWRVAAATVLTLS
                     LGAAAGWTARGTQRMGEVTRLGMEAAAAHAVFGVDPTRPIEIGPQNRPELVAWIDRKL
                     HRAINVPDLSAQGYRLIGGRVLSTMVGAAAMLVYDDDHGGRITIFLQPMRSDMATMQP
                     VGSGAANGYAWIDAHMGYGVISDGETSLHGLADQVRRAMTPKG"
     gene            complement(2326..>2656)
                     /locus_tag="VHX39_19415"
     CDS             complement(2326..>2656)
                     /locus_tag="VHX39_19415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /protein_id="HEX3993349.1"
                     /translation="MHNLFVSHWRTIRRRETMSGDGTESTEVAVGPEQEGALTRRDLL
                     AGLDRLAEDQRQVLLLVSVEGLEYREVASILDVPVGTVMSRLSRARDNLHAYMDGGKR
                     PLPRRVK"
BASE COUNT          488 a          843 c          768 g          557 t
ORIGIN      
        1 tgaacgtgac gtttcacggt gctggggtca acccgctcga tgacaagtac accgttggat
       61 tcgaggcatc gggccatctg aaacgcagcg atttcgatat caaccccaac attccgcttg
      121 tcggcgacag ggtgaacctg gtcatcagcg ccgcttttga gaagcaggat gaaagggaca
      181 cgtccgagcg ctgaagtgcc agatcatgcc gccagcgcgt tacacgtccg tcgccgttgt
      241 cctccactgg ctgctggctc tcggcattct gggcctgctg gcgatcgggc ttgccatgac
      301 ccaacttcgc ctgacgccga tgatgcagtt cagcctctat cagttgcata agtccgtcgg
      361 cgttacggta ctgctgctgg ttattccgcg ccttatatgg cgccttctgc atcggccccc
      421 gcccatgcct gacacgatgc cccggattga aaaacgcgcg gcggaaagta cgcacatatt
      481 tttctatttt ctaatgctgg gactgccact ttccggctgg gcgcttgtct ccgcttcggt
      541 tttcaacatc ccgaccgtgc tgtatggcgt cattccctgg ccaaatatgc cggtcctatc
      601 gagcctctcc aacaaggcgc ccgtcgaggc aatcctcaaa accttgcatg cctacggggc
      661 ctggctcctg ctagcggtcc tggtactcca cctcggtgct gtcctgcgcc accaattcat
      721 cttgcgagat gatgtcctgc gtcgaatgtc tctccggcct tcgtcgcacg gaagtgtcat
      781 cgcccgaaag gaattccaat gaagggagcc gccacgttgg catttctatg tcttttgtcc
      841 gccggtcccg ctgccgccgc gacttggacc gtcgatccgg cacgaagctc tctcggcttc
      901 gaaggcgtgc aaaccggttc accgtttcaa ggaaaattcg acaaattcac ggcacaaatc
      961 gagttcgacc catccaagcc ggaagctggc cacgtacttg tgctgatcga catgaccagt
     1021 ggtcacaccg gtgacacgca acgcgacgag agccttccac aaagcgattg gttcgacgta
     1081 aagtctcatc cacaggcacg gttcgaggcg acaggctttc gtacaaaagg cggcgatcat
     1141 tatgaagcca ccggcaggtt gacggtccgc ggaatcactc gggactgtgt cctcccattc
     1201 actctcgata tcagcggtga caccgcacat gcaaaaggcc gcgtgcagat cctgcgcact
     1261 gatttcagca ttggtcaggg gccctgggcg tcgggacaat gggttgcgct ccaagttggc
     1321 gtggatttcg atctgacagc gagacgtgtg ctttagagcg gtttccgaac atcgcgaatt
     1381 ggctgtggcc gatctggatt cgcaaggcgt ggcaaatcag cgagtcttcg cggacagtcg
     1441 atgcgagagg accttattcc tggcgcgtat tctgctgatt tacgagggtg tgtagtcgag
     1501 gcggtaaacg cgggcacgct gcggcgccgg cgccagactg cgatcatccc ttgggagtca
     1561 tagcccggcg aacttgatcg gccaggccat gaagcgatgt ttctccatcg gagatgacac
     1621 catagcccat atgcgcgtct atccacgcgt agccgtttgc cgcgcccgaa cctacaggtt
     1681 gcatcgttgc catatcagat cgcatcggct gcaggaatat cgtgatacgg ccgccgtgat
     1741 cgtcgtcgta aaccagcatc gcggccgcgc cgaccatggt ggagagcacc cggccgccga
     1801 tcagccgata gccctgcgca ctgagatccg gtacgttgat ggcgcggtgt agtttgcggt
     1861 ctatccaagc caccagttcc ggccggtttt gcggtccgat ctcgattgga cgggtcggat
     1921 ccacaccgaa gacggcgtgg gccgctgctg cttccatccc aagccgcgtc acctcgccca
     1981 tgcgttgcgt gccgcgtgcg gtccatcctg cggcggcgcc cagactgagc gtcagcaccg
     2041 ttgcggcggc gacgcgccag ggattgccga acaatccgcg ctgccgccgc acggcgcgct
     2101 gttccagcag gcgtcccagg tgtagcgagg acggcaccgg ctcatgcagt ttaaaggcga
     2161 gggcgtcccg cagcgcctcg gtctgccggc cccagcccgc aacccggcgc tgcaagacct
     2221 ggttcgcccg caggtgcgat tccacttcca cccgtcgtgt tgcgtccaaa cggttgtcga
     2281 cgtaggcgtg taattcatcc tcttgaacgg ggcggatcgg atcagtcatt tcacccttct
     2341 cggcaacggc cgcttaccgc cgtccatata tgcgtgcaga ttgtcccgcg cccgactgag
     2401 ccgtgacatc accgtcccga ccggaacgtc caggattgag gcgacctcgc ggtattccag
     2461 gccctcgacg ctaaccagca ggagcacctg acgctggtcc tcggccagtc ggtcgaggcc
     2521 ggccagcaga tcacgccttg tcagggcacc ttcttgctct ggcccaaccg caacctcggt
     2581 actctccgtc ccgtcgcccg acatagtctc ccgccgtcgt atggtccgcc agtggctgac
     2641 gaagaggttg tgcatg
//
LOCUS       DATAVD010001017         5953 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_99387, whole genome shotgun sequence.
ACCESSION   DATAVD010001017 DATAVD010000000
VERSION     DATAVD010001017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5953)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5953)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5953
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99387"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..207)
                     /locus_tag="VHX39_19420"
     CDS             complement(<1..207)
                     /locus_tag="VHX39_19420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993350.1"
                     /translation="MSKRDPLTYRDVLQWRAQACAEAGFTIQAVVWTMAADMCRAAWW
                     TDLYGAIEAERRVQCHCRAAGPGDP"
     gene            457..648
                     /locus_tag="VHX39_19425"
     CDS             457..648
                     /locus_tag="VHX39_19425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993351.1"
                     /translation="MAPKDKPQEFRQRAAECERLAELSRDSNARETLLFVASRWRAMA
                     DEDENRRPMLLAREHAFNE"
     gene            648..788
                     /locus_tag="VHX39_19430"
     CDS             648..788
                     /locus_tag="VHX39_19430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993352.1"
                     /translation="MRRAVRRRQDNLRAAKGIALGFVIGAGLWALLWFGVRALAVWLI
                     FR"
     gene            1100..2290
                     /locus_tag="VHX39_19435"
     CDS             1100..2290
                     /locus_tag="VHX39_19435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993353.1"
                     /translation="MPIAVPYLPMIAPANLCLTMIVRFGTANLERCLNSVAAHTSCWM
                     IGDAGSTESTAAFIRSFFAKRGQPGELITLPSDDHDRAWATLRELACTSRMAFDYLLV
                     TDADTELIVEDPDFRTRLQAACYDIAPETGFGCSSVHLLRRDAQHRDLPGDGPLLRGV
                     RSNDHASEADRVRKRTHDIRLLLHSLEQDPNHHRHWFCLAQLLQDAGFLTEAAKTYAK
                     RAAMGDGDEGAWYARVQEARCLRALNDDSGFVRAALAAFNQRPLRAEPLYDLARFYRE
                     RGMTNLSVLYAEAGLALERPDSEAMFVEDFVYTVGLREEYSIAAYYFPDPMRKERGHV
                     AADWLTLSRTAPQATRDLARSNVGFYCEPARVLILSAATRGRVSVRPRLAPGRRTSAD
                     LLWC"
     gene            2517..4241
                     /locus_tag="VHX39_19440"
     CDS             2517..4241
                     /locus_tag="VHX39_19440"
                     /inference="COORDINATES: protein motif:HMM:NF012516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004650 - polygalacturonase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase family 28 protein"
                     /protein_id="HEX3993354.1"
                     /translation="MHASHPTRRGVVFGAGSLALTTAGPADQGLRVSVADFGVVPGVT
                     DAGPGLRAAIAKLGKQAGSTLHFPPGRYRFAARDGNAMVFDDMDHLSLEGAGAELLFN
                     GTAAPLLMRGCHSPRLKGLTFDWERPPFSQGEVTGVGSDHKTVTLRIDADFSVDGSEQ
                     IQQLGTYDRHTGAMTRGGIDDGGSVAGASLVGPQMLQLTLKRPVPFKVGDTVVARHGN
                     GPHALQMVNCQNLSIADVTIYASPAMAIALGGCGGVSLQNVMVQPRPGSGRLLSTNAD
                     GLHCASCSGEISVTNCTFSGMGDDGINVTGLYLAVKADKDRRTLTLTGGRRSPAPNYA
                     APQSGDRLLLVSGRTLKPIAEVQAQAVNAQNNGGWVVQVSSGDAALNDEPMFAIDERS
                     RTQLQVSHCRFPGNRGRGVLAHSDTVIEDCVFEHQSGSAVLLAPDMYWQEGPAVERTV
                     VRRNQMKDGNLLGRAPSAVWIGAFVSPDGRQGIATPEIINRNIGVEHNVFIRPNGQAV
                     AAVATRDLRIEQNQIEHSGPIAFSLENVRNVRLQGNRCAPPAAIRVGSSSHNEVALSG
                     NVGLRITS"
     gene            4496..5230
                     /locus_tag="VHX39_19445"
     CDS             4496..5230
                     /locus_tag="VHX39_19445"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX3993355.1"
                     /translation="MPDIEWNKSTWADGYDWSNAGEEWSGPWGTSSAEWFATIMPRIG
                     STLPAVSILEIAPGFGRWTEFLLRFCRSYCGIDLSDRCVNNCQQRFAKFPNAKFFVND
                     GKSLDAVAGRRFNLVFSFDALVHADLDAMAFYVPQIVRLLAPGGVAFLHHSNLAALPN
                     VSFGHRSENVSAEAVGDLIRNHNGRILVQERFSWGENLLTDCFSMFCRAEDYPGFESQ
                     DITDAGLISVEGKSARERFQYYLKLR"
     gene            5391..>5953
                     /locus_tag="VHX39_19450"
     CDS             5391..>5953
                     /locus_tag="VHX39_19450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993356.1"
                     /translation="MRHAWTGPITYADPDAFAQIDAAALTTFGTGPGIVRAAPFAERK
                     FLRYAPEFVDDPGNSGLFSHIGASVYVSPAAFVAAADNAALVGYRTIIADGHFFNDEI
                     YSPERRGGYITRLSQTDPFPNEDTRLRRQADTDTFVLEQGGQHWRRFEGTTIVLCSGE
                     PSNYGSFLFRVLPKIFALKQLGLTNLPV"
BASE COUNT         1118 a         1803 c         1803 g         1229 t
ORIGIN      
        1 cgggtcgcca ggcccggcag cgcgacagtg gcattgcacc cgccgctcag cctcgatggc
       61 tccatacaga tccgtccacc acgccgcacg gcacatgtcc gcggccatgg tccagacgac
      121 cgcctggatc gtgaagccag cctcggcgca ggcctgcgcg cgccactgta acacatcccg
      181 gtaagtcaac gggtcccgct tgctcatggc caatccccca tagcacctgt ggaaagtcgg
      241 aaccggggtc tgtgttccgt tcccaggcca aatattggtc ggtttgcgtg caatccaccg
      301 aggccatttg tgaccttcgg gttgcctccg ttttccaccg catcatccac agatattgtg
      361 gatcacaacg ggaactttcc gaagttcgcg gattgaaatt cccctgccga cgggtgtagc
      421 ctctggcttc cgctccacca ggaggggggt tgtgcgatgg caccaaagga caaaccacaa
      481 gagttcaggc aacgcgccgc tgagtgcgag cgccttgccg aactcagccg ggattcaaac
      541 gcccgcgaaa cactgctttt tgtcgcctcg cgctggcgag ccatggcaga tgaggacgag
      601 aaccgtcgac cgatgctcct ggcacgcgag cacgccttta acgagtgatg cgccgcgccg
      661 tcagacgccg ccaggacaac ctgcgcgccg ccaaaggcat cgccctgggc ttcgtcatcg
      721 gcgctggtct ctgggcgctg ctgtggttcg gcgtgcgcgc gctcgccgtg tggctgatct
      781 tccggtgacc gactctagcg gccacatacg aaggcataag cagctgatgt ccgttgcata
      841 ggaccgacat ccaatgaaca ccggtgcaag ggcccggact ctgccagtgt ccgacactgt
      901 gtcgatcgta tctctgaaac ctgataagtg tctcccgccg acgtagtcct gcggtttgta
      961 ggcaggggcc ggcccgggcc tcgttgcgat cgggcggcac cttgtgttgc atcgccttgc
     1021 cggtatgcat ggggcatgca gcgccgaacc ctgcttccgc ggatgcgttt gcttgtcagg
     1081 gctgatcgtg taacaatatt tgcccatcgc cgtaccctat ctgcccatga ttgcccctgc
     1141 gaacctctgc ctcacgatga tcgtcaggtt cggaacggcg aacctggagc ggtgcctgaa
     1201 ctcggtcgct gcccacacca gttgctggat gatcggcgat gccggctcca ccgagagcac
     1261 cgcggcgttc atccgctcat ttttcgccaa acgcggccag ccgggcgaat tgatcaccct
     1321 cccctccgat gatcacgacc gcgcctgggc tacgctgcgc gagcttgcgt gcacctccag
     1381 gatggcgttc gattatctgc tggtgaccga tgccgatacc gagctgattg tcgaagaccc
     1441 tgacttccgc actcggctgc aggcagcgtg ctacgatatc gcccccgaga ccggtttcgg
     1501 ctgttccagc gttcacctgc tgcgccggga tgcgcaacat cgtgacttgc cgggagacgg
     1561 tccgttgctg cgcggtgtcc ggagtaacga ccatgcctcc gaggcggatc gtgtcagaaa
     1621 acgtacgcat gacatccggc tgctgctgca cagtctcgag caggatccga accatcaccg
     1681 ccattggttt tgcctcgcgc agttgctgca ggatgccggg ttcctgacgg aggcggcgaa
     1741 gacctacgca aagcgcgctg cgatggggga tggggacgag ggtgcgtggt atgctcgcgt
     1801 gcaggaggct cgctgcctgc gggccctgaa cgacgacagc ggttttgtgc gggccgcgtt
     1861 ggcagcgttc aatcaacgtc cgttgcgggc cgagccgctg tacgacctcg cgcggttcta
     1921 ccgtgagcgc ggcatgacca acctgagcgt gctgtatgcc gaagccggcc ttgcgctgga
     1981 acggccggac agcgaagcca tgttcgttga agatttcgtc tataccgtcg gattgcgcga
     2041 agaatattcg atcgccgcgt actatttccc cgaccccatg cgcaaggaac gaggccacgt
     2101 cgccgccgat tggttgaccc tgagccgcac ggcaccccag gcaacgcgtg acctggcgcg
     2161 gtccaacgtc ggcttttatt gcgagccagc cagagttctg attctatctg cagcaacccg
     2221 aggtcgagtc agcgtcaggc ctcgcctggc acccggacgg cgaacgtctg ctgatctcct
     2281 ttggtgttaa agactgcgag gcgtggtttg ccactgtcga agccgaggaa ctgcgtgcga
     2341 tcctgttgga catccacacc ttgcacgcga ccgggccggg agaagcgacg tcatggcaaa
     2401 gacttccgcc gccggtcccg gtgtcagccg acacgcaccg ggctccgatg ttggagaccg
     2461 cggcatgact cctgccgaag cgacaacgcg ttccccggcg caccgaggag gccacgatgc
     2521 acgcctcgca tccgacacga cgcggtgtcg tttttggcgc aggtagcctc gccctgacca
     2581 ctgctggccc agcggatcaa ggcttacgtg tgtcagtcgc ggatttcggc gtggtaccgg
     2641 gcgtgaccga cgccgggccc ggcttgcgtg cggcgatcgc aaagcttggt aagcaggcgg
     2701 ggtcgacgct ccactttccg cccggacgct atcgcttcgc ggcccgtgat ggcaacgcga
     2761 tggtcttcga tgacatggat catctttcgc tggagggtgc aggcgccgaa cttctgttca
     2821 acgggacagc cgcccctctt ctgatgcgtg gctgtcattc gccacggtta aaaggactga
     2881 cttttgactg ggagaggccg ccgttctcgc aaggtgaggt caccggcgtc ggatccgacc
     2941 acaagaccgt gacattgcgc atcgatgctg atttttcggt cgatgggtct gagcaaatac
     3001 agcaacttgg cacgtacgac cgtcacacgg gggcgatgac ccgcggcggc attgacgatg
     3061 gcgggtcggt tgcaggcgca tcgttggttg gcccacaaat gttgcaactc acattgaaga
     3121 ggccggtgcc cttcaaggtg ggagatacgg tggtggccag gcacggcaat ggtcctcacg
     3181 ctctgcagat ggtgaattgc caaaatctgt cgatcgctga cgtgacaatc tacgccagtc
     3241 cggcgatggc cattgcgctt ggcggatgtg gtggtgtttc cttgcaaaac gtgatggtac
     3301 aacccagacc tggctcgggt cgcctgttgt caacgaatgc agacggcctg cactgcgcgt
     3361 cctgttccgg agagatctcg gttacgaact gcacgttcag tgggatgggc gacgacggga
     3421 ttaacgtcac cggcctttac ctggccgtca aagctgacaa ggatcgccgg acgttgacct
     3481 taaccggtgg ccgccgttca ccggcaccga actatgcagc gccgcaatcc ggcgatcgcc
     3541 tgctgctggt gagcggacga acgctgaaac cgattgcgga ggtccaggcg caggcagtga
     3601 acgcccagaa taacggaggt tgggtggttc aggtgtcctc cggcgacgct gcgctcaacg
     3661 atgaaccaat gtttgccatc gatgagcgat ccagaacaca gcttcaggtt tcgcactgcc
     3721 gtttcccggg aaaccgtgga cgtggagttc ttgctcacag tgacacggtg atcgaagatt
     3781 gcgtgttcga gcatcagtcg ggctcggcgg ttttactcgc accggacatg tactggcagg
     3841 agggtccggc agtcgagcga accgtcgtgc gtcgcaatca aatgaaggac ggcaatctgt
     3901 tgggacgcgc tccgtccgcg gtttggatcg gcgccttcgt gtcgccggac ggacgtcagg
     3961 ggattgcgac accggaaatc atcaaccgaa atatcggggt cgagcataac gtcttcattc
     4021 ggcccaatgg ccaggcggta gctgcggtcg ccacccgtga cctgcgcatc gaacaaaacc
     4081 agatcgagca ctccgggccc atcgcgttca gcctggagaa cgttcgcaac gttcggcttc
     4141 aagggaatcg ctgcgccccc ccggccgcaa tccgggtagg ctcgtcgtcc cacaatgaag
     4201 ttgctctgag cgggaatgtc ggtcttcgga tcacctcgtg attctatcgc agccccctgc
     4261 cccggctgca atctgaaatg cagttaatct ggataaccga tcgaatttcc gacgtgtccc
     4321 gcaaccacca ggaaataagt tcgccgtagg ctccggccaa acgggcacca tgggtggaag
     4381 ggggcgaagt tgcttgagca tgcgtcaccc gggcttccgc atcatggggt agcgatcggc
     4441 gtgctgcggc attggttcaa gcattccggc ccacaaattc gatgggatca gacacatgcc
     4501 agacatcgag tggaacaaga gcacctgggc tgacggttac gactggagca acgccggaga
     4561 ggagtggtca ggcccctggg gtacatcctc cgccgaatgg ttcgcgacca tcatgccacg
     4621 gatcggctcc acacttccgg cggtttccat tctcgagatc gctccagggt tcggacgctg
     4681 gaccgaattt ctgctgcggt tctgccgatc atactgcggg attgatttgt cagatcggtg
     4741 tgtaaacaac tgccaacagc gcttcgcaaa gtttccgaac gcaaaattct tcgtcaacga
     4801 cgggaaatcg ctggacgcgg ttgccggacg caggttcaac ctggtgtttt cctttgacgc
     4861 tctggttcac gccgatcttg atgcgatggc tttctatgtg ccgcagatag tacgactttt
     4921 ggctccgggc ggcgtcgcgt ttctgcatca ctccaatctg gccgctctgc ccaacgtcag
     4981 ctttggtcac cgctctgaaa acgtatcggc ggaggccgtt ggcgatctga ttcgcaatca
     5041 taatggccga attctggttc aggagcgatt ttcctggggc gaaaacctgt taaccgactg
     5101 tttctcaatg ttctgccggg ccgaggatta tcctggtttc gagtcgcaag acatcaccga
     5161 cgctggcctg atctctgtgg agggcaagtc ggcacgcgaa cggtttcagt actatcttaa
     5221 gttgcgatag gcatctgcga gtaatgcatc tctgcgaaat tcggactgtg caacaccatc
     5281 gcattgggtc ggcttgccgg ggacatcagg agtagagtac tttgggctgg cctcttcgtt
     5341 ctggagaacc tttaacagtt atccctgatg cgcaacctgt cgcagagtcc atgcggcacg
     5401 cgtggaccgg cccaatcacc tatgccgacc cggacgcctt tgcgcagatt gatgcagcgg
     5461 cgctcaccac gtttggaacg ggacccggca ttgttcgggc agcgccgttc gctgaacgaa
     5521 aatttcttcg ttacgcaccg gaattcgtcg acgaccctgg caacagtggt ttgttctcgc
     5581 atatcggcgc cagcgtatat gtctcccctg cggctttcgt ggctgctgct gacaacgcag
     5641 ccttggtggg atatcgcacg attattgccg acgggcactt cttcaacgac gaaatttaca
     5701 gccccgagcg gcgcggcgga tacatcaccc gcctcagcca aaccgatccg ttccctaacg
     5761 aggacaccag gctgcggcgc caggccgaca ctgacacgtt cgtccttgag caaggcggtc
     5821 agcactggcg gcgtttcgag ggaacgacga tcgttctttg ttccggggaa ccctccaact
     5881 atggttcctt cctgtttcgt gtgctgccga aaatcttcgc cctcaaacaa ctggggctga
     5941 ccaatctacc ggt
//
LOCUS       DATAVD010001018         2146 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2518230, whole genome shotgun sequence.
ACCESSION   DATAVD010001018 DATAVD010000000
VERSION     DATAVD010001018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2146
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2518230"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..778
                     /locus_tag="VHX39_19455"
     CDS             <1..778
                     /locus_tag="VHX39_19455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEX3993357.1"
                     /translation="MPRSESSGFGIMQVDDKDVIRSFLEKPADPPAMPGKPDHSLASM
                     GIYVFNTKFLFDELQRDANDPTSSHDFGKDIIPYIVKHGRAVAHQFSRSCVRSGNDPR
                     SYWRDVGTVDAYWASNIDLTDILPELDLHDRSWPIWTHAEITPPAKFVHDEDGRRGEA
                     VTSLVSGGCIISGAALRRSLLFTGVHLHSFAKVENAVILPYVDVGEGARLANVVIDRG
                     VRIPPGLVVGEDPEDDAKRFRATEQGICLITQAMIDGLPT"
     gene            775..>2146
                     /gene="glgA"
                     /locus_tag="VHX39_19460"
     CDS             775..>2146
                     /gene="glgA"
                     /locus_tag="VHX39_19460"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HEX3993358.1"
                     /translation="MNPVRVLSVASEIYPIIKTGGLADVVGALPSALKAEGIEARTLV
                     PGYPAVTAALQAAEEVLSWPDFHGGPARVLAGSCAGIDLFVLDAAHLFARPGNPYSSP
                     DGADWPDNAIRFAGLGRVAADIAQRAIPAFVPDIVHTHDWQAGLTHAYLRYSDRPRPG
                     TVMTVHNLAFQGQFPRAMLRELGLPPESFNIDGVEYYGSIGFLKAGLRFADRITTVSP
                     TYALEIQRPDEGMGLDGLLRGRADLLSGILNGIDTAVWNPATDPHIASRFDAVRLEGR
                     APNKAALQQRLGLRVAPDAFLLGVISRLSWQKGLDLLLETLPALLNEPIQIAVLGNGD
                     ADLQNRYRAAAEAHPDRIGVLVGYDESLAHLIQAGADALVVPSRFEPCGLTQLCALRY
                     GAVPIVSRVGGLADTVVDADNVPTSDKAATGITFSPVTTDNLTAAIRRAHALFRKGDV
                     WPALQHN"
BASE COUNT          374 a          687 c          673 g          412 t
ORIGIN      
        1 aatgccgcgg tcggaatcca gcggctttgg catcatgcag gtcgacgaca aggatgttat
       61 ccggagcttc ctggaaaagc cggcggatcc gccggccatg ccgggcaaac ccgaccactc
      121 gctggccagc atgggaatct acgtgttcaa caccaagttt ctgttcgacg aactgcaacg
      181 cgacgccaat gatccgacct cgagccatga tttcggcaag gacattatcc cctacatcgt
      241 gaaacacggc cgcgccgtgg cgcaccagtt cagccgttcc tgcgtccgct ccggcaacga
      301 tccgcgcagc tactggcggg acgtcggaac ggtggacgcg tactgggcct ccaacatcga
      361 cctcaccgac attctgccgg aactcgatct tcacgatcgc tcctggccga tctggaccca
      421 cgccgaaatc acgccaccgg ccaaattcgt gcacgatgaa gatggccgcc gcggcgaggc
      481 ggtgacctcg ctggtgtcgg gtggatgcat catatccggc gcggcgctac gccgttcgct
      541 gctgttcacc ggcgtgcacc tgcattcctt cgccaaggtc gaaaatgcgg tgatcctgcc
      601 ctatgtcgat gtcggcgagg gcgcgcgact ggcgaatgtg gtgatcgacc gcggcgtgcg
      661 gattccaccg ggactggtgg tcggagaaga ccctgaagac gatgcgaagc gatttcgtgc
      721 caccgaacag ggcatctgcc tgatcacgca ggcgatgatc gacggtcttc cgacatgaat
      781 cctgttcgcg ttctgtcggt tgcctcggaa atctatccca tcatcaagac cggcggtctc
      841 gccgatgtgg tcggcgccct tccttcggcg ttgaaggccg aaggaattga ggcgcgcacg
      901 ctggtgccgg gctatcccgc ggtgaccgcc gcattgcaag cggcggaaga ggttctttcg
      961 tggccggatt tccacggcgg cccggcacgc gtgcttgccg gttcctgcgc cggcatcgac
     1021 ctgttcgtgc tcgacgccgc gcatcttttt gcgcgtccgg ggaaccccta ctcgtcaccg
     1081 gatggcgccg actggccgga taatgcaatc cgtttcgcgg gcctcgggcg cgtggcggcc
     1141 gatatcgccc agcgagcgat cccggcgttc gtacccgaca tcgtgcacac ccatgattgg
     1201 caggccgggc tgacgcatgc ctatctgcga tacagcgacc ggccgcggcc gggcacggtg
     1261 atgaccgttc acaacctcgc ctttcaaggg cagtttccgc gggcgatgtt acgtgaactc
     1321 ggattgccgc cggaatcgtt caatatcgac ggcgtcgaat attacgggtc gatcggattt
     1381 ttaaaggccg ggcttcggtt tgccgaccgc atcaccacgg tgtcgccgac ctatgcgctg
     1441 gaaatccagc ggcccgacga gggcatgggg ctggacggcc tgttgcgtgg ccgagcagac
     1501 ttgttgagcg gaatcctcaa cggcatcgac acggccgtgt ggaatcccgc gaccgatccc
     1561 cacatcgcct cgcgctttga cgccgtccga ttggaggggc gcgcgcccaa caaggccgcg
     1621 ctccagcaac gcctgggcct tcgggtggcg cccgacgcat ttctgttggg cgtcatcagc
     1681 cggctgtcct ggcaaaaggg gctcgacctc ctgctggaga ccctccccgc gctattgaac
     1741 gagcctatcc agatcgcggt actgggaaat ggcgatgcgg atttgcaaaa ccgctatcgc
     1801 gcggcggcgg aagcccatcc ggaccggatc ggcgtgttgg ttggctatga tgaaagtctc
     1861 gcgcatttga ttcaggccgg cgccgatgcg ctggtggtgc cgtcgcggtt tgagccatgc
     1921 ggccttaccc agctttgcgc gctgagatat ggcgcggttc ccatcgtatc gcgcgtaggt
     1981 ggcctggccg ataccgtggt ggatgccgat aacgtgccaa cctccgataa ggccgcgacc
     2041 ggcatcacat tcagcccggt cacgaccgac aatctcaccg ctgcgatccg ccgcgcgcat
     2101 gccttgtttc gcaaaggcga cgtgtggccc gcgcttcagc acaatg
//
LOCUS       DATAVD010001019         1939 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2889551, whole genome shotgun sequence.
ACCESSION   DATAVD010001019 DATAVD010000000
VERSION     DATAVD010001019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1939
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2889551"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1329
                     /locus_tag="VHX39_19465"
     CDS             <1..1329
                     /locus_tag="VHX39_19465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003619248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3993359.1"
                     /translation="PPATFQNAERPAATAAAARSIPRLRWSIGVLLGVGVLVNYFDRI
                     NLSVAAPQLKHEFGLTDGELGWLFSGFFWSYALLQIPTGMILDRFGVTSVNRVSTFFW
                     SLFSTVTAFASGFGTIFGARVLLGVAEAPGLPASSKATGYWFPRQERAFATSIFDAAA
                     KFSNVIGVPLVALAVVHFGWRWGFGITGALSFLYFVSFFFIYRDPSKHPRLSAEEREY
                     IRAGGATAEGAAERGEVAMLGYLLRSRKVWGLTIGFAAYGYSFYLFLTWLPNYLVETM
                     HMSILKSAGFSAIPWACATVADLVVGGWLIDHLIARGYHETPVRKTVLVCGMLLGLAV
                     LGATLTGNPVWAVVWISIALSGLAAAAPVGWSIPSLIAPRGGTGTIGGIMNFLNNLMG
                     AVAPITTGYIVGATHSFTGAFVTAGVVLIVGILAYVFLLGSLDPIPDPPA"
     gene            complement(1574..>1939)
                     /locus_tag="VHX39_19470"
     CDS             complement(1574..>1939)
                     /locus_tag="VHX39_19470"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3993360.1"
                     /translation="PDRASLDAWRRLAFPLYTRTPRDPDMAQRAVSRSDVLHWFTKPG
                     GESHTFNMFPDLGRIECPTLVLGGEDDPIHPIESQADIAGALPPHLVQFERFPNCGHG
                     VIPDAPDRAMEVIRDFIQH"
BASE COUNT          319 a          582 c          615 g          423 t
ORIGIN      
        1 ccgccagcaa cgtttcagaa tgcagagaga ccagcggcga cagccgccgc cgcgcggtcc
       61 atccccaggc tgcgctggag tatcggcgtt ctgctcgggg tcggcgtgct ggtcaattat
      121 ttcgaccgga tcaacctctc agtggccgcg ccgcagctga agcacgaatt cggtctgacc
      181 gatggggagt tgggctggct cttcagtggc ttcttctggt cctacgcact gctgcaaatt
      241 ccgaccggca tgattctcga tcgcttcggc gtcaccagcg tcaaccgtgt cagcacgttc
      301 ttctggtcgc tgttctcaac ggtgaccgcg ttcgcgagcg ggttcggcac catctttggt
      361 gcgcgggtgt tgctgggtgt cgccgaggct ccaggccttc ccgcaagctc gaaggcaacg
      421 ggctactggt ttccacggca ggaacgcgcg ttcgcgacgt cgattttcga tgccgcggca
      481 aaattctcca acgtcatcgg tgttccgctg gtggcgctgg ccgtggtgca tttcgggtgg
      541 cgatggggat tcggcatcac gggcgccctc agctttctgt atttcgtttc gttctttttc
      601 atctaccgcg accccagcaa acatccgcga ctaagcgccg aggagcgtga atatattcgt
      661 gcgggcggag ccaccgcgga gggggcggca gagcgcggtg aagtcgcaat gctcggctat
      721 ctgcttcgca gccggaaggt ctgggggttg acgatcggat tcgcggcgta cggatactcg
      781 ttctatttgt tcctgacctg gctgcccaac tatctcgtcg agacgatgca catgagcatc
      841 ctgaagtccg ccggcttctc ggccattccc tgggcctgtg ccacggtcgc cgatctcgtc
      901 gtgggcggct ggttgatcga tcatttgatc gcccggggct atcatgagac gccggtccgc
      961 aagacggtcc tggtgtgcgg catgctgctc ggcctcgccg tgctgggcgc cacccttacc
     1021 ggcaaccccg tctgggcggt cgtctggatc tcgatcgcgt tgagcggcct tgcggcggcc
     1081 gcgccggtcg gctggtcgat cccctcgctg atcgcaccgc gcggcggcac cggcacgata
     1141 ggcggcatca tgaatttcct gaacaacctg atgggagccg tggcgccgat cacaacaggc
     1201 tatatcgttg gggctacgca ttcctttacc ggagcattcg tgaccgctgg ggtcgtcctg
     1261 atcgtcggta tccttgcata cgtctttctc ctgggctcgc tggatccgat cccggatccg
     1321 ccggcttgaa aatggatgcg gacaagcggc ctgtgcaatg atggaggacg cgtggtgttg
     1381 gcggcgggcg gcgggtccat atcgccgtca tgcccgccgg cgagaccgag gtctgtcgtg
     1441 cgtcaatcgc gccggcttga cactcggcca gccatttccg gtatgcatcg atcaacggaa
     1501 atcgtcagac caagccggtt ggaccgtttg gtgccacgca ttcccctttg cgaggccgaa
     1561 cgatatcgtt caatcagtgc tggatgaaat ctcggatcac ttccatggcg cggtcaggtg
     1621 catcggggat tacgccgtgc ccgcaattag gaaaccgttc gaactgtacg aggtgcggag
     1681 ggagcgcccc cgcgatatcc gcttggctct cgatgggatg aattggatcg tcttccccgc
     1741 ctaacaccaa agtaggacac tcgatgcgac ctaagtcggg gaacatgttg aacgtgtggc
     1801 tctcaccgcc aggctttgta aaccaatgta acacgtctga ccgactgaca gcgcgttgtg
     1861 ccatgtccgg gtcacgcggg gtccgcgtat agagcggaaa ggccaatctt ctccaagcgt
     1921 cgagcgaggc tcggtcggg
//
LOCUS       DATAVD010001020         1522 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_284136, whole genome shotgun sequence.
ACCESSION   DATAVD010001020 DATAVD010000000
VERSION     DATAVD010001020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_284136"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..569)
                     /locus_tag="VHX39_19475"
     CDS             complement(<1..569)
                     /locus_tag="VHX39_19475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3993361.1"
                     /translation="MSETVRVPHRGLITASAMLAMLMQTLDSTIANVALPYMQGGMSA
                     SADEITWVLTSYVIAAAIMTAPVGWMARRFGRKKLFIASLAGFTVASMACGAAQTLDQ
                     LVAFRLLQGMCGAAIAPLSQATMLDIYPFSKRAQAMAIFSMGVTMGPIMGPTLGGYLT
                     DAYSWRFVFYVNLPFGILAILGLLIFMRET"
     gene            729..>1522
                     /locus_tag="VHX39_19480"
     CDS             729..>1522
                     /locus_tag="VHX39_19480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX3993362.1"
                     /translation="MTALSPLDRPNSYIGRGVPRPNLARLLQGRGQYVSDLVLPRMVH
                     VAFVRSPYAHARIQRIDREAARSMPGVVAVVTGAELAAVCSSWVGVLSHMKGLKSAPQ
                     HAIAVDIACWQGEAVAAVVADSRAAAEDAAEQVIVDYEELEPVADMRTALDAATPVIH
                     ASLGDNLAFERQLEAGAVDEAFARADAVAETEFVFGRHTGVTLEPRAVVADWRPGEDR
                     LTVYQGTQAPHMIQNIVALHLGLAEHQVRVVCKDVGGSFGIKVHVYP"
BASE COUNT          267 a          449 c          526 g          280 t
ORIGIN      
        1 gtctcccgca tgaagatcag caggcccagg atcgccagga tgccgaacgg caggttcacg
       61 tagaacacga accgccaact ataggcgtcg gtcagatatc cccccagggt cgggcccatg
      121 atcggtccca tcgttacccc catggagaag atcgccattg cctgggctcg tttggagaat
      181 gggtagatgt ccagcatcgt cgcctgggac aggggagcaa tcgccgcgcc gcacatgcct
      241 tgcagaaggc gaaaggccac aagctgatcc agcgtttgcg ccgcaccgca tgccatggaa
      301 gccaccgtga agcctgccag ggaggcgatg aacagctttt tccggccgaa acgacgtgcc
      361 atccaaccga ccggcgcggt catgatcgcg gcggcgatga cgtaggacgt cagcacccag
      421 gtgatctcat cggccgaggc cgacatgccc ccctgcatat agggcagcgc gacgttggcg
      481 atggtggagt ccagggtttg catgagcatc gccagcatcg cggacgcggt gatgaggcct
      541 cggtgcggaa cccggacggt ctcggacatc gggttatcgc cacccctcac gggcggctgg
      601 cggcggataa ggtggcatga tcctggacgg ctttttgata ttgtcggcag tgtgcgcccg
      661 gtttttgcat taggctacat tgacggtgac gattgacgat gacgggcggg cataggcacg
      721 gtgacggtat gaccgcattg tcgccgcttg accggccgaa ttcctatatc gggcgtggtg
      781 ttccgcggcc caacctggcg cggttgctgc aaggacgcgg ccaatacgtc agcgatctgg
      841 tcctgccgcg catggtgcac gtcgcattcg ttcgctcgcc ctatgcgcac gcccgtatcc
      901 agcggatcga tcgggaagcc gcacgctcca tgccgggggt cgttgcggtc gtgaccgggg
      961 cggaactggc ggcggtgtgt tcgtcgtggg tcggtgtcct gtcgcacatg aagggcctga
     1021 aatcggcacc gcaacatgcc atcgccgtgg atatcgcctg ctggcagggg gaagcggttg
     1081 ccgccgtcgt cgctgattcc cgggcggcgg cggaggacgc ggcggaacag gtcattgtgg
     1141 actatgagga gttggagccg gtcgccgata tgcgcaccgc gctcgacgcc gcaacaccgg
     1201 tgatccatgc atcgctcggc gacaacctgg cgttcgagcg ccagttggaa gccggcgcgg
     1261 tggatgaggc gttcgctcgg gctgatgctg tggccgaaac ggaattcgtc tttggccgcc
     1321 ataccggcgt gacgctggag cctcgcgcgg tggtcgccga ctggcggccg ggcgaggatc
     1381 gcctgacggt gtatcagggc actcaggcgc cgcacatgat ccagaacatc gtggcgctgc
     1441 atctgggttt ggcagaacac caggttcggg tcgtgtgcaa ggatgtcggc gggtcgttcg
     1501 gcatcaaggt ccatgtctat cc
//
LOCUS       DATAVD010001021         3387 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3635478, whole genome shotgun sequence.
ACCESSION   DATAVD010001021 DATAVD010000000
VERSION     DATAVD010001021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3387
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3635478"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..985
                     /locus_tag="VHX39_19485"
     CDS             <1..985
                     /locus_tag="VHX39_19485"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEX3993363.1"
                     /translation="PPAEAELVMRHIVGANLVGHDSHGVIQIPTYIDRIKAGHIVPGA
                     PWEIQQETATTTVIDGNWGFGYVVNDRAMRYTIEKAKKQNVAVATVRRQSHIGRLASY
                     PLLASAEGMIAMITADSGRSSKAVAPYGGAKARLGTNPICFAIPSNLDGPLVFDMATS
                     AAAAGKINVATARGEQVPAGWLIDAEGKPSTDPRVLRSGGALLPLGGTEGYKGTGLAA
                     IVEILSGLLTGLGFGVDPQGRHNDGCFMAVFNVAAFRDLATFKQEVTDFAHYLKDTPK
                     AQGFTEVFYPGEVEYRKEQDRRKNGVPIEDATWKRLTDLAKGYGIAEKLGF"
     gene            988..2682
                     /locus_tag="VHX39_19490"
     CDS             988..2682
                     /locus_tag="VHX39_19490"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3993364.1"
                     /translation="MVDLVIRGGTVIDGSGGDPFEADVAIDAGKIVTVGKVSARGVEE
                     IDAKGKIVTPGFVDPHSHYDAQATWSSRITPSSWHGVTTTLIGNCGVGFAPCEPADRG
                     LLVKLMEGVEDIPEPVLTEGLQWNWRSFPDFLDALESRPFDLDIATQVPHAAVRVHVM
                     GQRGVDREPATEADAHAMARLAAEGIRAGALGFSTSRTINHRTKAGEHTPTLDAEEAE
                     LITIARALPGGWLQVISDFDEPVAEFAMLRRLVEQSGRPMAITILQRDGVPEEWRRVT
                     GWIADAHRSGLPMLGQVLTRPTGIILGFEISQNPFLGRPSYDAIADLPFAAKIAELRR
                     PERRANILAEETEDYGLRRRVRRWDRMFPMSDPPNYEPSPEDSISALAAQSRRDPAEF
                     AYDLLLENNGRTLLYRPLSNYTYGNLDTVHDMLAHDATIVGLGDGGAHVGILSDASAL
                     STMLTHWTRDRKGERFALPWAVKRITRDSAQAIGLHDRGLVANGYKADLNVIDYDRLR
                     VRVPEVVYDLPAGGRRLIQRADGYEVTIVSGTPVSRNGEATGALPGRLVRGARAIP"
     gene            2679..>3387
                     /locus_tag="VHX39_19495"
     CDS             2679..>3387
                     /locus_tag="VHX39_19495"
                     /inference="COORDINATES: protein motif:HMM:NF013482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX3993365.1"
                     /translation="MTFIGQSTRRAEDARFLTGRGTFVDDVNVPGQLYAYVVRSPHAH
                     AVIERIDTGGGLVFTYKDITDLGLMPCATAVATVGPMIVPPRSALAIGKVRHVGDPVA
                     FVVAETPAAARDAAERVVVEYRPLPSVVDSAAALTTDAPRLWDQGNLSFRFQKGDPDA
                     VRAGLAQAAHVVELELINNRLIIAPTETRAAIGRFEHGSFHLFASVASVHALRDQLAG
                     VFGVPTEQLTVSAPDVGG"
BASE COUNT          634 a          979 c         1097 g          677 t
ORIGIN      
        1 gcccccggcg gaggccgaac tcgtcatgcg ccatatcgtc ggcgccaacc tcgtcggcca
       61 cgactcgcac ggcgtcatcc agatcccgac ctacatcgat cgcatcaagg ccggccatat
      121 cgtgcccggc gcaccctggg agatccaaca ggaaaccgcg accacgacag tgatcgacgg
      181 caactgggga tttggctacg tggtcaacga ccgggcgatg cgttacacga tcgagaaggc
      241 aaaaaagcaa aacgtcgccg tcgccaccgt gcgccgtcag agccatatcg gacggctggc
      301 aagttatccg ctgctcgcat ccgctgaggg catgatcgcg atgatcactg ccgattccgg
      361 gcgctcatcg aaggctgttg cgccgtatgg cggggccaag gcacggcttg gcaccaatcc
      421 gatttgtttc gcgatcccgt cgaacctgga tgggccgctg gtgttcgata tggcgacctc
      481 ggccgctgcg gcaggcaaga tcaacgtcgc caccgctcgc ggcgaacagg tgccggcggg
      541 ttggctgatt gacgccgagg gcaagccgtc caccgatccg agagttttac gttccggggg
      601 ggcattgctg cctctgggcg gcaccgaggg ctacaaaggg accggccttg ctgcgattgt
      661 ggagattctg tctggtttgc tgactggtct cggctttggt gtcgaccccc agggccggca
      721 caacgacggt tgtttcatgg cggtattcaa tgtcgccgcg ttccgcgatc tggcgacgtt
      781 caagcaggaa gtcaccgatt tcgcgcatta cttgaaagac acaccgaaag cgcagggttt
      841 taccgaagtg ttctacccgg gtgaggtcga gtaccgcaaa gaacaggacc gccggaaaaa
      901 tggtgtgccg attgaagatg cgacatggaa acggttgact gatctggcaa aaggttatgg
      961 catcgcagag aagttaggat tctgatcatg gtagaccttg tcatccgtgg cggcaccgta
     1021 atcgacggca gcggcggcga tccgttcgag gccgatgtcg caattgatgc cggcaaaatc
     1081 gtcacggttg gcaaagtgtc tgcacgtggc gttgaggaaa tcgacgcaaa ggggaaaatt
     1141 gtcacccctg gctttgtcga tccgcattcg cattatgacg cccaggctac gtggagcagt
     1201 cggattacgc caagttcgtg gcacggggta actacgacct tgattggcaa ttgcggcgtc
     1261 gggtttgcac cctgcgaacc agcggatcga ggcttgttgg tcaagttgat ggaaggcgtc
     1321 gaagatattc cagagccagt gctcactgaa gggttgcagt ggaactggcg gagtttcccg
     1381 gatttcctgg atgcgctcga gtcacggcca tttgatctcg acatcgcaac gcaggttccg
     1441 cacgctgcgg tgcgggtgca tgtgatgggc cagcgcggcg tcgatcgcga accggcaacc
     1501 gaggcggacg cccacgcgat ggctcggtta gcggctgagg gaatccgggc aggggcgctg
     1561 gggttttcga cgtcgcgcac gatcaaccac aggaccaaag cgggcgagca tactcccacg
     1621 ctggatgccg aggaggcgga actcatcacc attgctcggg cgttgcctgg gggttggctg
     1681 caggtgatct ccgacttcga tgaacctgtg gcggaatttg ccatgctacg tcgcctggtc
     1741 gaacagtccg gccggcctat ggcgattacg attttgcaac gcgatggggt gcccgaggag
     1801 tggcgccggg tcaccggttg gatcgctgac gcgcatcggt ccggtctgcc gatgctgggg
     1861 caggtattga cccggccgac cgggatcatt ctcggcttcg agatttctca gaacccgttt
     1921 cttggccggc cgagttacga cgccatcgct gatctgccgt ttgcagcgaa gatcgccgaa
     1981 ctgcggcggc cggagcgtcg cgcgaacatt ctggctgagg aaaccgaaga ttacggactg
     2041 cgccgccggg tccgccgttg ggaccgcatg tttccgatgt cggatccgcc gaactacgag
     2101 ccttcgccgg aagacagcat ctccgctctg gcagcgcagt cgcgccgtga tccggccgag
     2161 ttcgcctacg atttgttgtt ggaaaacaat ggaaggacat tactgtaccg gccattgtcc
     2221 aactatacct atggcaatct tgataccgtg catgacatgc tggcccatga cgcgacgatt
     2281 gtcggtctcg gcgatggcgg cgcgcatgtc ggtattttgt cggacgccag cgcgctcagc
     2341 acgatgttga cccattggac tcgcgaccgg aagggcgaac gatttgcctt gccatgggca
     2401 gtgaagcgaa tcacccggga ttcggcgcag gcgattgggt tgcacgatcg cggactggtg
     2461 gcaaacgggt acaaagccga tctgaatgtg atcgactacg accggctgcg cgttcgagtt
     2521 ccggaggtgg tttacgacct tcccgccggc ggtcgtcgtc tgattcaacg cgctgacggc
     2581 tacgaggtaa ccatcgtttc ggggacgccg gtctcccgca acggcgaggc cacaggggca
     2641 ctgcccggcc gcctggtgcg tggagcacgt gcaatcccgt gactttcatc ggccagtcca
     2701 cgcgtcgggc tgaggatgcg cggtttctca ccggacgcgg gacttttgtc gatgacgtca
     2761 acgtgcctgg tcagctctac gcgtatgtcg tgcgttctcc acacgcccac gccgtcatcg
     2821 aacggatcga taccggcggt gggttggtct tcacttacaa ggacattacc gaccttggat
     2881 tgatgccatg cgcgacggcg gtcgcgacgg ttgggccgat gatcgttcca cccagatcag
     2941 cgctggcaat tggcaaagtg cgtcacgttg gcgatccggt cgcgtttgtc gttgccgaaa
     3001 ccccggccgc ggcgcgcgac gccgccgaac gggtggtggt cgaataccgt cctctgccat
     3061 cggtggtcga ttccgcggca gccctgacca cagatgcacc acggttatgg gaccaaggca
     3121 atttgtcgtt ccgcttccag aagggtgatc ccgacgcggt tcgggctggc ctggcgcaag
     3181 cggcacatgt cgtggaactg gagctgatca acaaccgcct gatcattgcg cctaccgaaa
     3241 cccgtgcggc gatcggccgg ttcgaacacg gctcgtttca tttgttcgcc agcgtcgcca
     3301 gcgtgcatgc attgcgtgac caactggcag gcgtatttgg cgtgccgacc gagcaactga
     3361 cggtttccgc tccggatgtc ggcggcg
//
LOCUS       DATAVD010001022         8245 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_469473, whole genome shotgun sequence.
ACCESSION   DATAVD010001022 DATAVD010000000
VERSION     DATAVD010001022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8245
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_469473"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..1435)
                     /locus_tag="VHX39_19500"
     CDS             complement(26..1435)
                     /locus_tag="VHX39_19500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEX3993366.1"
                     /translation="MAPPPPFGANSAAARDVANVLHPYTDLKTHLEVGPVVVSHGKGV
                     RVWDDAGKQYIEGVAGLWCAALGFDNERLVQAAVTQMRKLPFYHAFAAKSHEPMIDLA
                     EMLIERAPVPMSKVFFANSGSEANDSAIKMVWYLNNALGRPNKKKIIGRWKGYHGITI
                     GSASLTGLPVNHRSFDVPLPGFVHTATPHHYHGANPGESEADFATRLADQLEQLILQE
                     GPDTVAAMWAEPVMGAGGVIVPPADYFPKIQAVLHKYDVLLVADEVICGFWRTGTYWG
                     CQSLNMTPDILVCAKALSASYLPISAVMVNQRVFDALAKESNEIGTFGHGFTYSGHPV
                     PAAVAIETLKIYDEMNIGAHVGQVGPYLQSELRRRFADHPLVGEIRGIGLIAAVELVA
                     DKGSHSNFDPRERVGIRLMKLCEENGVILRSVANDSLCFSPPLVISTAEIDEMLDRVS
                     ESLDELTVQLRREQIAVVR"
     gene            1564..2493
                     /locus_tag="VHX39_19505"
     CDS             1564..2493
                     /locus_tag="VHX39_19505"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3993367.1"
                     /translation="MPVDPQIQALLDLRAKLPPLHSLSVADAREQMAARDIPGLRKPD
                     VASVVNRDMQGPGGSLPLRIYTPHGEGPFPLMVFFHGSGFVLCDLDTHDGICRNLCAG
                     ADCVVVSVDYRLAPEHKFPAAPDDCLAATRWVAENASALHGDAGRIMVVGDSAGGNLA
                     AVTALRCRDESGPRLIGQLLIYPVTDYFQPGTPSMMENAEGFGLTREGMIWFWNHYVR
                     SPADGVHPHAAPLRAATLAGLPQALAFTAEYDPLRDEGELYAEALNKDGVPVEMKRWD
                     GMNHGFFFFPGVVDKATDATDEACIWARRVFGN"
     gene            2560..3324
                     /locus_tag="VHX39_19510"
     CDS             2560..3324
                     /locus_tag="VHX39_19510"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX3993368.1"
                     /translation="MNLFNLKGKVAVITGGNGGIGLGMAEGIASLGANIVIAGRDMEK
                     ATSAVATLHEMGIKAEFVSADVTQKTACEALIAEAENRFGRVDILVNNAGTSIRKMPQ
                     DFTEDEWRHVLDTNLTSAFLCSQAAYHAMKKVGGGKMINIGSMMSLFGAPYATPYASS
                     KGGIVQMTRALATAWAKDNIQVNAVLPGWIDTDLTKRARQQVPGLHESVEKRTPEGRW
                     GVPRDMSGVAAFLASEASNFVTGAAIPVDGGFSIAM"
     gene            complement(3340..4800)
                     /gene="glpK"
                     /locus_tag="VHX39_19515"
     CDS             complement(3340..4800)
                     /gene="glpK"
                     /locus_tag="VHX39_19515"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014104205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004370 - glycerol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HEX3993369.1"
                     /translation="MTRYVGAIDQGTTSSRFIVFDRAGHTVAKAQREHRQIFPQPGWV
                     EHDPDEILTNTHAVIEEALRGASLTKADLVAVGITNQRETTVLWDRRTGRPVHNALVW
                     QDTRVEPLVAEFSRDGGQDRFRDRTGLPLASYFSALKLRWLLDHVAEEQDLAFGTIDA
                     WLMWHLTGLHVTDVTNASRTQLMNIATLDWDDVLLTAFGIPRSVLPSIVASSAIYGQA
                     RGVLEGVPVAGILGDQQAALLGQACSEPGEAKNTYGTGCFLLMHTGTIPVPSKHGLVT
                     TVAAKLGNAPATYALEGSVAIAGALVQWLRDNLGIIKASSEIEALANSVPDNGDVYLV
                     PAFSGLYAPYWRADARGIIAGLTRFSTAGHIARAALEAVAFQTMDVVRAMEQDSGVAM
                     TSLRVDGGMVVNQTLMQFQADMLNVPVVRPRVLETTALGAAYAAGLAVGYWRGLDDLR
                     ANWDVAKTWQPAMDSERRDALKQSWAKAVERSMYWA"
     gene            complement(4815..7421)
                     /locus_tag="VHX39_19520"
     CDS             complement(4815..7421)
                     /locus_tag="VHX39_19520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetate--CoA ligase family
                     protein/GNAT family N-acetyltransferase"
                     /protein_id="HEX3993370.1"
                     /translation="MAIIGASSRPRAVGHLVLANMRTAGFSGSLMPVNPRESEIDGLP
                     AFGDIDALPEDPDLAVIATPPDTVPGLIAQLARRGCAGAVVITAGFGEGGLDVGVQRR
                     EAMLDAARPASLRIIGPNCLGLVAPGVGVNASFSAAPARDGGIACFTQSGAVAATLMD
                     WGYAHSVGFRYLISLGDMADVDFGDLLDYVATDPATKAVLLYVESVTSARKFMSAARA
                     AARGKPVIVVKSGRHPAASAAAKSHTGALAGSDAVYDAAFRRAGLLRVKGMGDLFSAA
                     ETLSRAVSPRRGERVAILTNGGGFGVLATDAWLDAGGIMAALSEATIATLDKALPPTW
                     SRANPVDIVGDAGAQRYEDALSALLVDSGVDTILALNCPTGVSSPIEGADGLLAAWAK
                     RPKYAAPNLLACWLTANHGEAIRARFGEAGIPAFDTIESAIAGCAELAEFARNQRLML
                     RVPAQGEDREPETDLGKAGRLIDAAQRPWMDSADAKQLIAAHGIPVVPVLSATTPEEA
                     GRAAEEMGGSVALKIKSSVSLHKSDVGGVVLDLSGAEAVRAAAESMLQRIDNVDGFTI
                     EAMAQRPGAFELIIGASVDPTFGPVILFGQGGVAVEAIGDTTLALPPLDMELARGMIA
                     RTRISRQLRGFRGRPSVDMDALGAALVSISRLMLDHPEVVELDINPILADAEGVIAID
                     ARVRLDDPAHRLQSAIVPYPRQLETSVDLRDGTVMQLRPVRPDDATLLRRFLEAVSPE
                     DIRARFHGALRDFSGPLLIRLTQIDYDREIALVGFRDGDELPLGVVRLYAEPDEVSGE
                     FSILVRSGLHGHGLGTALMHRIIALARDRGLARIVGSVLRDNTRMLRLVRELGFVAEN
                     ARGDEVTMVLHL"
     gene            7632..>8245
                     /locus_tag="VHX39_19525"
     CDS             7632..>8245
                     /locus_tag="VHX39_19525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3993371.1"
                     /translation="MSERFAGRTAVITGGVSGIGAGIAARLSAEGASLSLWDVDEAGL
                     ARSNAAHTVVLDVTDPDAVHRAAAATAAALGKIDILVTSAGITGPNVSTWEYPVAAWD
                     KVIDVNLKGVFYCNRAVVPFMRSQNSGRIVNIASIAGKDGNPNASAYSASKAGVIGLT
                     KSLGKELAETGIRVNCVTPAAVRTPLFTQMTQQQIDWMLSKIPIG"
BASE COUNT         1618 a         2622 c         2494 g         1511 t
ORIGIN      
        1 cgcggatcgg acgcggcgtc agagactacc gcacgactgc aatctgttcc cggcgaagct
       61 gcaccgtcaa ttcatcaagc gactcgctga cgcgatccag catctcatcg atttccgccg
      121 ttgaaatcac cagcggcgga ctgaagcaca gcgaatcgtt cgccacactt cgcagaatca
      181 cgccattttc ctcacacagc ttcatcagcc ggatgccaac gcgctcccgc gggtcaaagt
      241 tgctgtggct gcccttgtcg gcgacgagtt ccactgcggc gatcaaaccg atgccgcgaa
      301 tttcaccgac caacggatga tcggcgaagc ggcggcgcag ctcgctttgc agatacgggc
      361 cgacctgccc gacatgcgcg ccgatattca tctcgtcgta gatttttagc gtttcgatcg
      421 cgacggccgc cggcaccgga tggcccgagt aggtaaatcc gtgtccgaac gtgccgattt
      481 cgttgctctc cttggcgagg gcgtcgaaca cccgctgatt caccatcacg gcgctgatcg
      541 gcaaatagga cgccgatagc gctttggcgc agaccagaat gtcgggtgtc atgttcagcg
      601 actgacagcc ccaataagtg ccggtccgcc aaaatccgca gatcacctca tcggcgacca
      661 gcagcacatc gtatttgtgc agcaccgcct ggatctttgg aaaataatct gcgggtggaa
      721 cgatcacgcc gccggcaccc atgaccggct cggcccacat cgcagcgacc gtgtcggggc
      781 cttcctgcag gatcagttgc tccaactgat cggcgaggcg ggtggcaaaa tccgcttcgg
      841 actcaccagg gttcgcgccg tgatagtgat gcggtgtcgc cgtatggacg aaaccgggca
      901 gcgggacgtc aaagcttcgg tgatttacgg gcaacccggt caatgacgcc gagccgatgg
      961 taatgccatg atatcccttc caccgcccga tgatcttttt cttgttgggc cggcccagtg
     1021 cgttgttgag gtaccagacc attttgatgg cggagtcgtt ggcctcggag ccggagttgg
     1081 cgaagaacac cttgctcatc ggcaccggag cgcgctcgat cagcatctcg gcgagatcga
     1141 tcatcggctc atgcgatttc gctgcgaatg cgtggtagaa cggcaacttg cgcatctgcg
     1201 tgaccgcggc ctgcaccagg cgttcgttgt cgaacccaag tgctgcgcac caaagacccg
     1261 cgacgccttc gatatattgc ttgcccgcat cgtcccagac ccgcacccct ttgccgtggg
     1321 atactacgac cggcccgacc tcgaggtgag ttttcaggtc ggtgtaggga tgcagcacat
     1381 tggcaacgtc gcgcgcggcg gccgagttgg cgccgaaagg tgggggcggg gccataacgg
     1441 agcgctcctg gagtttgctg cgtgatccta ccgcgtttgg ccgagcgagg ccacaaccgc
     1501 gcaacgcctt gacctctgcc acaatgcggt gtcagaaatt tctgataatg ggagcgtcag
     1561 atcatgccgg tcgacccgca aattcaggct ctgctcgatc tgcgagcgaa attgccgccg
     1621 ttgcactctt tgtcggtcgc tgatgcacgg gagcaaatgg ccgcgcgaga cattccggga
     1681 ctgcgcaagc cagatgtggc ctcggtcgta aatcgcgata tgcaaggacc aggcggatcg
     1741 ctgccgctgc ggatttacac accacacggt gaggggccgt ttccactgat ggtgttcttc
     1801 cacggcagcg ggttcgtgct gtgcgatctt gatacgcacg acggcatatg ccgcaacctg
     1861 tgtgccggag cggactgcgt ggtggtatcg gtggactacc ggttggcacc cgagcacaaa
     1921 ttccctgctg cgccagacga ttgcctggcg gcgacccggt gggttgcgga aaatgcgtct
     1981 gctctgcatg gcgatgcggg ccggatcatg gtggtgggcg acagtgcagg tggcaatctc
     2041 gccgcggtca ccgcgctacg ctgccgcgat gagagtggcc ctcggttgat cggccaattg
     2101 ctgatctatc cggtgacgga ttatttccag cctggcacgc catcgatgat ggagaatgcc
     2161 gaaggcttcg ggctgacgcg ggagggcatg atctggtttt ggaaccatta cgttcgctcg
     2221 cccgcggacg gcgtgcatcc acacgctgcg ccgttgcgtg ctgcaaccct cgccggattg
     2281 ccgcaggcgc tggccttcac agccgaatac gatccattac gcgacgaggg tgagctttac
     2341 gccgaagctc tgaacaagga cggagttccg gttgagatga agcgctggga cggaatgaac
     2401 catggctttt tcttcttccc cggcgtcgtg gacaaagcca ctgatgccac cgatgaagcc
     2461 tgcatctggg cgcgccgcgt gttcggcaac tgagccaggc tggcttgcca tcccgcacct
     2521 cgacgggcca ggttgggtgc gaaagtgggg aggtcggcga tgaatttgtt caatctcaaa
     2581 ggcaaggtcg cggtcattac cggcggcaat ggcggcatcg gcctggggat ggctgagggc
     2641 atcgcctcgc ttggcgccaa catcgtcatc gccggccggg acatggaaaa ggccacctcc
     2701 gccgtggcca cactccacga gatgggcatc aaggcggagt tcgtttccgc cgacgtaacg
     2761 caaaaaacgg cgtgcgaggc gttgatcgca gaggcagaaa atcggttcgg ccgggtagac
     2821 atcctggtga ataatgccgg cacctccatt cggaaaatgc cgcaggattt taccgaggac
     2881 gaatggcgtc acgttttgga taccaacctg acgagtgcgt tcctgtgctc acaggcagct
     2941 tatcacgcga tgaagaaggt cggcggcggc aagatgatca acatcgggtc gatgatgtcg
     3001 ctgttcggtg cgccctatgc gaccccgtac gccagctcca aaggcggcat cgtgcaaatg
     3061 acccgcgcgc tcgccaccgc ctgggccaaa gacaacatcc aggtgaacgc ggtgctgccg
     3121 ggctggatcg acaccgatct gacgaagcga gcccgccagc aggtgcccgg gttgcatgaa
     3181 agtgtcgaga agcgcacgcc ggaaggccgc tggggtgtgc cgcgggacat gtccggcgtg
     3241 gcagcgttcc ttgccagcga ggcctcgaat ttcgtgacag gagcagcgat cccggtcgac
     3301 ggtggatttt cgatcgcgat gtgacctcga ccgcccggat caggcccagt acatcgaccg
     3361 ctcgaccgcc ttcgcccacg attgcttaag cgcatcgcga cgctcggagt ccatcgcagg
     3421 ctgccaggtc tttgcgacgt cccagttcgc ccgcaggtcg tcgaggcctc gccaatatcc
     3481 gaccgcgagt ccggcggcat aggcggcacc aagcgcggtc gtttccagca cgcgaggccg
     3541 caccaccggc acgttcagca tatccgcctg aaactgcatc agcgtctggt tcaccaccat
     3601 tccgccatcg acccgcaacg acgtcatcgc aaccccggaa tcctgctcca tggcgcgcac
     3661 gacatccatt gtctgaaagg cgacagcctc cagtgccgcg cgcgcaatgt gcccggccgt
     3721 ggagaagcgt gtcagaccgg caatgatccc gcgcgcatcg gctcgccagt acggcgcata
     3781 aagtccggaa aacgccggca cgagatacac gtcaccattg tcgggcaccg agttcgccaa
     3841 tgcctcgatt tccgagctgg ccttgataat ccccaggttg tcgcgcagcc attgcaccag
     3901 tgctccggca atcgcgaccg agccttccag cgcataggtt gccggcgcat tgccgagttt
     3961 cgccgcaaca gttgtcacca acccgtgttt tgatggcacc ggaatcgtgc cggtgtgcat
     4021 caacaggaaa cagccggtgc cgtaagtatt cttcgcttca cctggttcag aacatgcctg
     4081 tcccagcagc gccgcctgtt ggtcacccag aataccggcg accggtacgc cctcgagcac
     4141 gccgcgcgcc tggccataaa tggcagagga ggcaacgatc gacggcaaca ccgaacgggg
     4201 aatgccaaac gctgtcagca gcacgtcgtc ccagtccaac gtggcaatat tcatcagttg
     4261 ggtgcggctt gcattggtta cgtcggtaac gtgcaatccc gtcaggtgcc acatcaacca
     4321 ggcatcgatt gtaccgaacg cgagatcttg ctcttccgcg acgtgatcca acagccagcg
     4381 cagtttcaga gccgagaaat agctggccag cggcagcccg gtccggtcac gaaaccgatc
     4441 ctggccgccg tcccgggaaa actccgcaac caggggctcg acccgcgtat cttgccagac
     4501 cagtgcgttg tgcaccggac gtccagtacg gcgatcccac aacaccgtgg tttcccgctg
     4561 gttcgtgatc cccactgcaa ccagatcggc cttcgtcaac gaagcgccgc gcaacgcctc
     4621 ttcgatcacc gcatgcgtgt tcgtgagaat ttcgtcagga tcgtgttcga cccaacccgg
     4681 ctggggaaaa atttgccggt gctcacgttg cgccttcgcc acggtgtggc ccgctcggtc
     4741 gaatacgatg aaccggctgg aggtcgtgcc ctgatcgatc gcacccacat accgcgtcat
     4801 cttttctcct ggttttacag gtgcagcacc atggtcactt catcgccgcg tgcattctct
     4861 gccacaaagc ccagttcccg aaccaaacgc aacatccgcg tgttgtcccg taagaccgag
     4921 ccaacgattc gtgccagacc gcggtcccgg gccaaggcga tgatccgatg catcagggca
     4981 gtgcccagtc cgtggccgtg caaaccgctg cggacgagga tggagaactc gccgctgact
     5041 tcgtccggtt cagcgtacag gcggaccacg ccaagcggca actcgtcgcc gtcgcggaat
     5101 cctaccagcg ctatttcgcg gtcgtaatcg atctgtgtca ggcgaatcag caatggcccg
     5161 ctgaaatcgc gcagcgcacc gtggaacctg gcacgaatgt cttccggcga aactgcctcc
     5221 agaaagcgcc gcaacagagt cgcatcgtca gggcggactg gacgcaattg cattacggtg
     5281 ccgtcccgca aatccacgct ggtttccagt tgtctgggat acggcacgat cgccgattgc
     5341 agccggtgcg ccggatcatc aagacgcaca cgcgcatcga tcgctatgac cccctcggcg
     5401 tcggccagaa tcggattgat gtcgagttcc accacctccg gatgatccag catcaaccgg
     5461 gatatcgaga ccaacgcagc acccagcgca tccatgtcga ccgacggccg accgcgaaaa
     5521 ccgcgcaatt gtcgcgagat tcgtgtgcgc gcgatcatgc cgcgggcgag ttccatgtcc
     5581 agtggaggca gcgccagagt ggtatcgcca atcgcctcca ccgcgacgcc gccctgaccg
     5641 aacaggatga ccggaccgaa agtgggatcc acgctggcgc cgatgatcaa ctcaaatgcg
     5701 ccgggccgtt gcgccattgc ctcgatggtg aagccgtcca cgttgtcaat ccgttgtagc
     5761 atcgattcag cggcggcgcg caccgcctcg gcgcccgaca gatcgagcac aacacctccg
     5821 acgtccgatt tgtgcagaga gacactcgat ttgatcttca gtgcgacgga gccgcccatc
     5881 tcttccgcag cgcgtccggc ttcctcgggc gtcgtggcgg acagcaccgg gacgaccggg
     5941 ataccgtgcg ccgcgatcaa ttgttttgca tcggccgaat ccatccaagg gcgttgcgcc
     6001 gcatcgatca gccgtcccgc tttcccaagg tcggtttccg gttcgcgatc ttccccctgg
     6061 gctggcacgc gcaacatcaa tcgctgattg cgagcaaact ccgcgagttc agcgcagccg
     6121 gcgatggcac tttcgatcgt gtcgaaagca ggaataccgg cctcgccgaa ccgcgcccgg
     6181 atcgcctcgc catggttggc agttagccaa cacgccagca ggttgggcgc tgcatatttc
     6241 ggccgctttg cccatgcggc gagcaatccg tcggcaccct caatcggtga agatacgccg
     6301 gtcgggcaat tcagtgccag tatcgtatcg acgccgctgt cgaccagcaa cgcagacaat
     6361 gcatcctcat aacgttgtgc accggcgtcg ccgacgatgt cgacgggatt ggcgcgcgac
     6421 caggttggcg gcaaagcttt gtccaaggtc gcgatcgttg cctcagacaa cgccgccatg
     6481 atgccgccgg cgtcgagcca cgcgtcagtg gccagcacac caaatccgcc gccattggtc
     6541 aggattgcaa ctcgttcgcc gcgccgaggg ctgaccgcac gtgacaaggt ctcggcggcg
     6601 gagaacaggt cgcccatccc tttgacccgc agcaaacccg ctcgccggaa tgctgcgtca
     6661 tagactgcat ccgatcctgc caacgcaccg gtgtgagact tcgctgcggc cgaggcggcg
     6721 ggatggcggc ccgatttcac cacgatgacc ggcttgccac gtgcggcggc acgggccgcg
     6781 ctcatgaatt tccgcgccga cgtgacgctc tcgacataaa gcagcaccgc cttggtggcg
     6841 gggtcggtcg cgacgtaatc caacaggtcg ccgaaatcga catccgccat atcgccaagc
     6901 gaaatgagat agcgaaagcc gacggaatgc gcgtagcccc agtccatcaa tgtcgctgcc
     6961 actgcgccgg attgggtgaa acatgcgatg ccgccatcgc gcgccggagc cgcactgaaa
     7021 ctcgcgttga cgccgacgcc aggcgccacc agcccgagac aattgggacc gatgatgcgc
     7081 agcgatgcgg gccgtgccgc gtccagcatt gcctcgcgtc gctgcacccc aacatcgagg
     7141 ccaccttcgc caaatccggc agtaatgacg actgcgccgg cacagcctcg acgtgccagc
     7201 tgcgcaatca ggcctggcac ggtgtccggt ggggttgcga tgacggcgag gtccggatcc
     7261 tccggcagcg catcgatgtc gccgaacgcg ggcagcccgt cgatttcgct ttcgcgcgga
     7321 ttgaccggca tcagcgaccc ggaaaacccc gccgtacgca tattcgccag caccaggtgc
     7381 ccaactgccc gcggccggct ggaggcgccg atgatagcca cgcggcgcgg cgccaaaatt
     7441 cgatcgagat ttcggattgt cacagggtca cctcatggtt tgacgtgatc ccccacggcg
     7501 gcattggata gggacgggcc ggaccggggg caagtgaaac ctgcgggacg attttggtcg
     7561 cgtggcccgc tctggaccgg ccgcgtgggt tcagcccaaa ctgcggtgga aagaaatcag
     7621 ggagttggac catgtcggag cgcttcgccg gccgcacagc cgtcatcacc ggtggtgtat
     7681 cgggaattgg cgcgggcatc gctgcacggc tgtccgcgga aggggcgagt ctgagcttat
     7741 gggatgtcga tgaggcaggc ctcgccaggt cgaacgcggc gcacaccgtc gtgcttgacg
     7801 tcaccgaccc cgatgctgtg caccgcgccg ccgctgccac cgccgccgct ctgggaaaaa
     7861 tcgacattct ggttacctct gccggcatca ctggtccgaa cgtgtcaacc tgggaatacc
     7921 cggtcgcggc atgggacaaa gtgatcgacg tcaacctgaa gggagtattc tactgcaatc
     7981 gggccgtcgt gccattcatg cgctcgcaaa acagcggacg gatcgtgaac attgcctcga
     8041 tcgccggcaa ggatggcaat ccgaacgctt ccgcttactc cgcttctaaa gctggcgtca
     8101 tcgggcttac caagtcactg ggcaaagagc ttgccgagac cggcataagg gttaattgcg
     8161 tcacgccggc tgcggtgcgg accccgctgt tcacgcaaat gacccagcag caaattgact
     8221 ggatgctgtc gaaaattccc atcgg
//
LOCUS       DATAVD010001023         2844 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2703673, whole genome shotgun sequence.
ACCESSION   DATAVD010001023 DATAVD010000000
VERSION     DATAVD010001023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2844
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2703673"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..795)
                     /locus_tag="VHX39_19530"
     CDS             complement(<1..795)
                     /locus_tag="VHX39_19530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993372.1"
                     /translation="MAEPDELQESVVALIPLVLSSLDRLETITRHMHPLRLPELVAPL
                     GSDDSGLLAALAQVRDVAWPEELRPLRDQIVLAGESVVRAHAGLREAARSPDNRIGAI
                     RASRQQYRAIEALYPLASALPSISRFFIEPARRHDTTLLARIDAARPPHPDTGVFHFD
                     NDIDSRGGFSVYVPEYLTGDTPVPVVFALHGGSGQGRIFLWSWLREARSRGVIVVAPT
                     ATGNTWSLMEPEVDSAHLSRILDYVRAHWAVDATKLLLSGMSDGGTF"
     gene            complement(850..984)
                     /locus_tag="VHX39_19535"
                     /pseudo
     CDS             complement(850..984)
                     /locus_tag="VHX39_19535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017900662.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
     gene            1108..2418
                     /locus_tag="VHX39_19540"
     CDS             1108..2418
                     /locus_tag="VHX39_19540"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX3993373.1"
                     /translation="MNQQPTLTERLISLFDHFDLKTAIVATQMSGDVADLARRWPERI
                     AGLLLCTPSRLDPAPFAAIAARTVMIAGERGMTAEVTARAEPRLPGSRRVVLADYDAP
                     GWADVVADHTDAVVTTLRGMTSKASIPNLASGFGIHAGITFQVHGNGPSLVLLPFFLA
                     PSQWEPAIPSLAQHFTVIVLGGRHLGGVAALEDRAQGRSYAGMIGGLFDEMAPEAGES
                     ILDVGCGSGALDRLLARRFGDANPITATDVNPFLLREAASLATEDQVADHITFRQGNA
                     EQLPFPDASFDHAFTVTVFEEVDADLALRELFRVVRPGGRVGVIVRAIDMPQWWHLDL
                     PEDVRRKANVPPQSCGPRGVADASLYRRMGEAGFGRLTCFPTLVTFDRPDGPIWRYRE
                     DHVLSQLTEPETEIWHTATKAARQAGLLFMANPLHRAVGRKPIR"
     gene            2482..>2844
                     /locus_tag="VHX39_19545"
     CDS             2482..>2844
                     /locus_tag="VHX39_19545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HEX3993374.1"
                     /translation="MVFNSYQFLFGFLPIVLTGTFLLARIGAWAAQCWLIAASLAFYA
                     AWNVAYVPLLLGSIVFNYGIAVGMTKVANPATRAWFLGCAVAVNLGLLGYYKYTGYFL
                     ELVNAATGTGYRWRSLILP"
BASE COUNT          528 a          921 c          850 g          545 t
ORIGIN      
        1 gaaggtgccg ccgtcgctca tgccgctcag cagcagtttc gttgcatcga ccgcccaatg
       61 cgcccggaca tagtccagaa tgcgtgataa atgcgcactg tcgacctccg gctccatcag
      121 cgaccaggta ttgccggtcg ccgtcggtgc caccacgatc accccacgcg aacgtgcttc
      181 acgcagccaa ctccagagga aaatccgtcc ctgccccgag ccgccgtgca gcgcaaacac
      241 caccggcacc ggcgtatcgc cggtcagata ttccggcaca taaaccgaaa acccgccgcg
      301 ggagtcgatg tcgttatcga agtgaaaaac gccggtatcc gggtgcggcg gccgagctgc
      361 atcgatccgg gccaataacg tcgtatcgtg ccggcgcgct ggctcgatga agaaccggct
      421 gatcgagggc aacgccgagg ccaacggata aagtgcctcg atagcccggt attgctggcg
      481 tgatgcacgg atggcaccga tgcgattgtc cggcgacctt gcggcttcac gcaatccggc
      541 atgagcgcgc actacgcttt cccctgccag cacgatctga tcacgcaacg gcctaagttc
      601 ctccggccat gccacatcgc gcacctgggc caaggccgca agcaacccgc tgtcgtcaga
      661 acccaacggc gcaacgagtt caggcagtcg aagcggatgc atgtgccgcg tgatggtttc
      721 cagacgatcg agcgagctca gtaccagcgg gatcaaagca actactgatt cctgtagttc
      781 gtccggttcc gccatcagtg atctccgttc tgccctccgc gccgcgtatt gtggtaccga
      841 cgctgcggct cagccgaagc ggttggcgcc cggcgtgcca gactgacagt accacaccag
      901 caggataatg aaaccgatga tcggaataaa cgccagcaac tgccaccaac cgctgcgatc
      961 ggtatcatgc aggcgccgac ccactcgcga aatgatagca ccgttgccaa tcaggagcaa
     1021 tcgtgggttg tagcgatttg tgctgcagca cgcttctctg agccgctgca atcccgcatc
     1081 ctggcccgag caccggggag ccacaaaatg aaccagcaac caacattgac cgagcggcta
     1141 atctcgttgt tcgaccattt cgacctgaag acggccattg tagcgaccca aatgtcgggc
     1201 gacgtcgcgg atctggcccg ccgatggccg gagcgtattg ccgggttgct gttgtgcacg
     1261 ccgtcgcgcc tcgatccggc accgttcgcc gccatcgctg cgcgaaccgt gatgattgcc
     1321 ggcgaacgtg gcatgaccgc cgaggtcacc gcacgcgccg aacccagatt gcccggatcg
     1381 cgccgggtcg tgctggcgga ttacgacgca cccgggtggg ccgatgtcgt cgccgaccat
     1441 accgatgccg tcgtcacaac tttgcgcggc atgaccagta aggcgagcat cccgaacctc
     1501 gcctccggct tcgggatcca tgccggcatc acgtttcagg tgcacggcaa tggaccctca
     1561 ctggtgttgt tgccgttttt cctggcgcca tcgcaatggg agccggcgat cccctccctg
     1621 gcccaacact tcaccgtcat cgtcctcggc ggccgccatc tgggcggggt cgcggcgctg
     1681 gaggaccgcg cccagggcag aagttatgcg gggatgattg gtgggttatt cgacgagatg
     1741 gcgcctgagg caggcgagtc catcctcgat gtcggctgcg ggtcgggtgc gctggaccgt
     1801 ctgctggcac gccgatttgg cgatgccaat ccgatcactg ccaccgacgt gaaccccttt
     1861 ctgttgcgtg aagccgcttc gctcgcaacc gaagatcagg tcgcagacca cattaccttc
     1921 cgccaaggca acgccgaaca gctgccgttt ccggacgcca gcttcgacca tgcatttacc
     1981 gtgaccgtgt tcgaggaagt cgacgccgac ctcgcgttac gcgaactgtt tcgggtcgtg
     2041 cgacccggtg gccgggtcgg cgtcatcgtg cgtgcgatcg atatgccgca gtggtggcac
     2101 ctcgatttgc cagaggacgt gcggcgcaag gcaaacgtgc ccccgcaatc ctgcggtcca
     2161 cgaggcgtgg ccgacgccag cctgtatcgc cgcatgggcg aagccggatt cgggcgactg
     2221 acctgcttcc cgacactggt caccttcgat cgtcccgacg gcccgatctg gcgctatcgc
     2281 gaggatcacg ttctgtcgca actgaccgag cccgagaccg agatctggca taccgcgacc
     2341 aaggctgcac gccaggcagg tttactgttc atggccaatc cgctgcatcg cgctgtcggc
     2401 cgcaaaccca tccgctgacc tgaacgtccc agcggcctgc gcattaaccg gatcgagagg
     2461 aattgccgcg acaaggtctc ggtggtcttc aattcctacc agttcctgtt cggttttctt
     2521 cccattgtgt tgaccggtac ttttctgctg gcgcggattg gtgcctgggc ggcgcaatgc
     2581 tggctgatcg ccgcgtcgct ggcgttctat gccgcgtgga acgttgccta tgtgccgttg
     2641 ctgctcggct cgatcgtgtt caattacggc atcgccgtcg gcatgaccaa ggtggcaaac
     2701 ccggcaacgc gcgcatggtt tctgggttgt gctgtggcag tcaatctggg attgcttggc
     2761 tattataaat acaccggata tttcctggag ctggtaaacg ccgcaacagg caccggctac
     2821 aggtggcggt cgctgatcct gcct
//
LOCUS       DATAVD010001024         2120 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1958784, whole genome shotgun sequence.
ACCESSION   DATAVD010001024 DATAVD010000000
VERSION     DATAVD010001024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1958784"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            132..1154
                     /locus_tag="VHX39_19550"
     CDS             132..1154
                     /locus_tag="VHX39_19550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993375.1"
                     /translation="MSRRTRRTFLVVAAVLLLLAVAIFLRSKAPPEAARLLPESDGII
                     YVNLRPVRTFFRVKLKPPQRVPEYEEFVEATGIDWERDLDEAAIALHRMPDPNGPNGP
                     VAYSMVLVGKLTGARLNHWFDTHATSREIYAGHTIYNVPSEGRTVRVAQIGYDMVAVS
                     NTPTPEQIHSMLDRHRTAALPFAGSTLLSQHFHDVPLLSLAWGVGQIGLPFSESGAIQ
                     VLGFRLPLQADSTIVASLTPELTRAGSLRLRVEEFAPTDEAAEGQASALSTLVSLARG
                     FTLPLSDNAANRGLKEVLKTAVVSQKRNRVVMTATLPGSLFAGLVSGASASTAAAPGP
                     VPQASK"
     gene            1359..>2120
                     /locus_tag="VHX39_19555"
     CDS             1359..>2120
                     /locus_tag="VHX39_19555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993376.1"
                     /translation="MHRFAKTSLLFVPLLALPGMLTPGALAADGGNAKVLTGQAAFTD
                     AAHESPGTRRHVTVADLPAPAPDQSVDNGAPMVPRSANAWPQAPKGFKVDLYATGLDN
                     PRLLRTAPNGDIFLAESETGKIRVFRGVGADGKPQQTSVFAEGLHQPFGIAFYPAGPD
                     PKYIYIGDTDQIVRFPYKNGDLKATGKMENLAELPGGGRLRGGGHWTRDLVFSKDGTK
                     LFASVGSHSNVDDPDTHPEEFHRADVLEFTPTGKFL"
BASE COUNT          372 a          726 c          635 g          387 t
ORIGIN      
        1 cgtcgactcc gacgccatga acgtcaagaa ctagccgcac caccacgctc cggatcagga
       61 ctctgtctgc aatcgggcgc cgggccggtg cggtttggcc ctggtggtac cttagtctct
      121 gacgaccccc gatgagccgg cgcacgcgca gaacgttcct ggtggtggcc gcggtcctgt
      181 tgttgctggc cgtggccatc tttctgcgct ccaaggcgcc gcctgaagct gcccgcctgc
      241 tgccggagtc cgacggcatc atctacgtca atctacgacc cgtccgcact tttttccggg
      301 tgaagctcaa gccgccgcaa cgggttcctg aatacgagga attcgttgag gcgaccggca
      361 tcgactggga gcgcgacctg gacgaagccg ccatcgcgct ccaccgcatg cctgatccga
      421 acggccccaa cgggccggtt gcctattcca tggtgctggt ggggaaactg accggagcgc
      481 ggctgaacca ctggttcgac acccacgcga cctcacgcga gatttacgcc gggcacacca
      541 tctacaacgt cccatcggaa ggccgcacgg tgcgcgtagc ccagatcggc tatgacatgg
      601 tggcagtgtc caacacgcct accccggagc agatccactc catgctcgac cggcatcgca
      661 ccgcggcttt gccctttgcc ggatccactc tgctttcgca gcactttcac gatgtgcctc
      721 tgttgtcgct ggcctggggc gtggggcaga tcggactgcc tttctcggaa agcggcgcca
      781 tccaggtgct ggggtttcgc ctgccgctgc aagccgactc caccatcgtg gccagcttga
      841 caccggagct cacgcgtgcc ggctctctgc gcctgcgggt ggaggagttt gcccccaccg
      901 acgaggcggc ggagggacag gcgtcggccc tgtcgacgct cgtctccctg gcccgcggct
      961 tcaccttgcc gctcagcgac aacgccgcca accgcggtct caaggaagtg ctgaagaccg
     1021 ccgtcgtcag ccaaaaacgc aaccgcgtgg ttatgaccgc caccctcccg ggctccctgt
     1081 tcgccggact ggtatcgggt gcttcggctt cgacggcggc cgcaccagga cctgtcccgc
     1141 aagcatcgaa gtaacagatg aggtgacccg cacccgtctg ggctggctcg gatgagtcaa
     1201 tttcaccccc tgatccgtat gcttccgtag tgaaccgaat tgggaagtcc ggaaagtcac
     1261 gaaacaaggc ccttcccttt tagaatttcc atcatccaaa gcagtgcagg cggcgctcgg
     1321 ctgcctgccc caaacagcga tttccccgac gaggttacat gcaccgcttt gcaaagactt
     1381 cccttctctt cgttcctctc ctggcgctgc ccggcatgct gacacccggc gcattggctg
     1441 ccgacggcgg caacgccaag gtgttgaccg gacaggctgc cttcaccgac gccgctcacg
     1501 agtcaccggg gacacgccgc catgtgacgg tggccgatct gcccgcacct gcacccgacc
     1561 agtctgtcga taatggcgct ccgatggtgc cgcgttcggc caacgcatgg ccgcaggcgc
     1621 ccaagggctt caaggtggac ttgtacgcga cgggcctcga caaccctcgc ctgctgcgta
     1681 ccgcgcccaa tggcgatatt tttcttgccg agagcgagac cggcaagatc cgggtgtttc
     1741 gcggcgtggg cgcggacggc aagccgcagc agacgtcggt cttcgccgag ggcctgcatc
     1801 agccattcgg catcgccttc tacccggccg gtcccgatcc caagtacatc tacatcgggg
     1861 acaccgacca gatcgtccga ttcccctata agaacggcga cctgaaggca accggaaaga
     1921 tggagaacct ggctgagcta ccgggcgggg gacgcctgcg cggtggcggc cactggaccc
     1981 gtgacctggt gttctcaaaa gatggcacga agctgttcgc ctcggttgga tcgcactcta
     2041 atgtcgatga cccggacacg cacccggagg agtttcaccg cgccgacgtg ctggagttca
     2101 cgccgacggg caagttcctc
//
LOCUS       DATAVD010001025         2019 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3448166, whole genome shotgun sequence.
ACCESSION   DATAVD010001025 DATAVD010000000
VERSION     DATAVD010001025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3448166"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(447..617)
                     /locus_tag="VHX39_19560"
     CDS             complement(447..617)
                     /locus_tag="VHX39_19560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993377.1"
                     /translation="MQLATQATLKVVKTSGFPEARSKDAGGFSGDFRLLSKPYSIDEL
                     SCVPRQAFKADF"
     gene            complement(649..1227)
                     /locus_tag="VHX39_19565"
     CDS             complement(649..1227)
                     /locus_tag="VHX39_19565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase subunit alpha"
                     /protein_id="HEX3993378.1"
                     /translation="MNILEADGKALLVALRKLLADKNLVTQAELAERMAATDNASPGQ
                     GAKMVARAWTDTGYRALMLEDGTKAAEAMNIPMRGMPPLGVLENTDTVHNLVVCTLCS
                     CYPRAVLGYPPFWYKSAAYRARAVRDPRGLLAEFRTTLPENVKIHVVDSTADYRWMVL
                     PQRPAGTDGWSVEQLAAIVREGDMVGVTIPSI"
     gene            complement(1224..1535)
                     /locus_tag="VHX39_19570"
     CDS             complement(1224..1535)
                     /locus_tag="VHX39_19570"
                     /EC_number="4.2.1.84"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018822 - nitrile hydratase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SH3-like domain-containing protein"
                     /protein_id="HEX3993379.1"
                     /translation="MRFAPGDAVTVKDDWPETRGPVHIRTPHYLRGHKGRIVRYLGHY
                     PNPEDLAFARPATERPLYHVAFSMPELWPAGTRTDGTRTDGTGQDEVIVEIYEHWLEQ
                     P"
     gene            complement(1532..1840)
                     /locus_tag="VHX39_19575"
     CDS             complement(1532..1840)
                     /locus_tag="VHX39_19575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase"
                     /protein_id="HEX3993380.1"
                     /translation="MADDRKPSPHDLGGVAKFMCEAVDMEPHGLDAFDREVDALSGVL
                     RAKQMMTVDEMRRGIEAIPEAEYHRLSYYRRWIRSLTDNLLRKGIITEAELRAALEET
                     "
BASE COUNT          398 a          651 c          586 g          384 t
ORIGIN      
        1 tccagttgct gagatcgacc gcgtgcatgc cgtccacgct gatcaacaag acgtgcttgt
       61 agtcgcctcc aacggccgcg ccgtcgtcgc ggtcggctcg aacggcctgg ctgccggccg
      121 cgagcagcac tgcgacgccg accgcggtag acaacagata gctacggaac gaacgcatga
      181 cgtgatcccc tgaggtctgt ggaatgggcc tccgtgggag gaggcaccgc gttctgaccg
      241 ccagaccacg acatggcgat gacaaacaga tgtcaatgtt gttacaattg gcaatgagtc
      301 tgacgcgtgc gcatcagacg gtatctggac cgcaatggcc ggcggcatat gacgtatccg
      361 ttacaatctc gcagcgtatg aggaacaccc cggggccatt agttgctggc ccagtgtcga
      421 atcaacggtt cattgatcga tcgggatcaa aaatcggctt tgaacgcctg gcgcgggacg
      481 cagctcaatt cgtcgatgct gtacggcttg ctcagcaggc gaaaatcccc ggagaaaccg
      541 cccgcgtcct tggagcgggc ttccggaaaa cctgacgtct tcacgacctt caacgtcgcc
      601 tgggttgcca gttgcacccc atcaagtccg aatcgtacca gaataacgtc aaatcgaggg
      661 aatggtgacg cccaccatat cgccctcacg aacaatcgcg gccagctgct cgacgctcca
      721 gccgtccgtg ccggccggtc gttgcggcag caccatccat cggtaatccg ccgtcgagtc
      781 gacgacgtgg atttttacat tctccggcaa agtggtgcgg aactccgcca gcagtccgcg
      841 cggatcgcgt accgcgcggg ctcgatacgc tgccgatttg taccagaacg gcgggtaacc
      901 gaggaccgcg cgcgggtagc aactgcatag cgtgcaaacg accaaattat gcacggtgtc
      961 ggtattttcc agcacgccca gtggcggcat gccgcgcatg gggatgttca tcgcctcggc
     1021 ggccttggtg ccatcttcca acatcagcgc ccgatacccg gtatccgtcc aggcccgcgc
     1081 caccattttc gccccctgtc ccgggcttgc attgtcggtg gccgccatcc gttcggcgag
     1141 ttcggcctgc gtaacaagat ttttgtccgc cagcagcttg cgcagcgcaa ccagcaaagc
     1201 cttgccgtcc gcttcgagga tgttcatggc tgctccaacc aatgctcata gatttcgacg
     1261 atgacttcgt cctgcccagt accgtctgtc cgagtaccgt ctgtccgagt accggccggc
     1321 cagagttccg gcatcgaaaa ggcgacatgg tacaagggtc gttccgtcgc aggccgggcg
     1381 aatgcgaggt cttccgggtt cgggtaatgc cccaaatacc gcacaatgcg acctttgtga
     1441 ccgcgcaagt agtgtggcgt gcgaatatgc accggaccgc gggtctcggg ccaatcgtcc
     1501 ttcaccgtca ccgcatcgcc gggagcaaat ctcatgtctc ctccagggcc gcgcggagct
     1561 ctgcctcggt gataatgcct ttgcgcaaca aattgtcggt gagcgagcgg atccagcggc
     1621 ggtagtagct gaggcggtga tactcggcct caggaatcgc ttcgatgccg cgccgcattt
     1681 cgtcgaccgt catcatctgc ttcgcgcgca gcacgccgga cagcgcatcc acctcgcggt
     1741 cgaatgcatc caacccgtgc ggctccatgt ccaccgcttc gcacatgaac tttgccacgc
     1801 caccgaggtc gtgcggggaa ggttttctgt catctgccat gggcccgacc ttagcgtgag
     1861 ccagcgtccc ggtaaatcgc cgcgcggtca cgcccgccgc gttcccaatg cgatgatcac
     1921 ctgaccggcg aggacggaaa ccagcatgat gagaacaacc ggccaaaccg cgccggggtg
     1981 ccacaattcc actgccacag tgcacaacat gccgtagcc
//
LOCUS       DATAVD010001026         2287 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1027564, whole genome shotgun sequence.
ACCESSION   DATAVD010001026 DATAVD010000000
VERSION     DATAVD010001026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2287
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1027564"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..1375)
                     /locus_tag="VHX39_19580"
     CDS             complement(149..1375)
                     /locus_tag="VHX39_19580"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3993381.1"
                     /translation="MSERPPTIEGRKSWIAASITLAILSVSYGSPLLIVVGLKPIQEA
                     LGTDRSVIALAGSLVWVGTGLGGIPMGWLADRIGIRAVVGIGAVMMALGLAISTIGGA
                     LPLYLGHGLFLGLIGNGAIYAPLLIYVSRWFDRRRGAAIALISSGQYIAGVFWPSIFE
                     RGIAAYGWQTMMLFYAVVVLLGILPLLPLLQPVPKPVSAGPAVSAGRDRSILGLSPNL
                     VQTVICVAGFCCCIPMAIPNSHLVAFCSDIGIAPVHGAAMLSVLLGCAFISRQFWGSL
                     ADRIGGLRTVMAGSACQAAAIAAFLITQNEAGLFVIAGVYGLGFSGIIPSYSVAIRDL
                     FPSAEASWRIPTILFTAMSGMAVGSWLAGRIYDHFASYAPAFATGAAFNLLNLVLIGF
                     LVIRLPRRSRPVLAPA"
     gene            complement(1467..>2287)
                     /locus_tag="VHX39_19585"
     CDS             complement(1467..>2287)
                     /locus_tag="VHX39_19585"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HEX3993382.1"
                     /translation="IGPADQLRALGIGAMADLPVGRNLRDHLSVALIWNRLEPGPFHG
                     QLRLDRAALNMARALLFRTGPATTLPLGEIAFVKSRPDLEVPDIEFLLAVRTLETRPW
                     IPGLQAAYQDVMGIRPILLHPRSQGSVTLRSADPAAPVRIAFNFLSAPEDLPTLRNAY
                     HLARDVAGQKPMDRFRGAPVAPAPGILTNAQIDAWIRETVITVNHPLGTCAIGAQGVL
                     DPELRVHGIERLRVVDASALPDMPSAHINAIVMMLAERASDLIRGRPPLAPANI"
BASE COUNT          511 a          703 c          723 g          350 t
ORIGIN      
        1 gatatgtccg cagtcggcgc aaatcatgcg ctccctgtta tcgccctccg ggattcggcg
       61 ttcgaaattg ggcataccga catggtgggc ctcagaaacg gacggatcaa gagtcctcgg
      121 ccttaaaagc cctatgcgaa agttccaatc aggccggcgc cagcacgggt ctgcttcggc
      181 gcggcaggcg tatgaccagg aaaccgatca aaacgaggtt caaaagattg aatgccgcac
      241 cggttgcgaa tgctggcgca tacgaagcga aatgatcgta aatccgcccg gcgagccagc
      301 ttccaacagc cattcccgac atggcggtga acagtattgt tgggatccgc catgacgctt
      361 cggcggaagg aaacaggtcg cggatcgcca ccgagtagga cgggatgatc ccgctgaatc
      421 cgagtccata cacaccggca atgacaaaca atccggcctc gttctgggta atcaggaacg
      481 cggcaatggc agccgcctga caggccgagc cggccatcac ggtgcgcagt cctccgattc
      541 ggtctgccag cgagccccaa aactgacgcg agataaacgc gcaacctaaa agtaccgaca
      601 gcatggcagc gccgtgcacc ggtgcgatgc cgatgtcgga gcaaaacgcg acgagatgcg
      661 agttcgggat tgccattgga atacagcaac aaaagccggc aacgcatatc accgtctgca
      721 ccaggttggg cgacaggccg aggatagacc ggtcacggcc cgcgctgacc gccggtccgg
      781 cgctgaccgg cttcggcacc ggttgcagca gcggcaacaa gggcaaaatg ccaagtagaa
      841 cgacgacggc gtaaaataac atcatggtct gccagccgta ggcagcgatg cctcgctcga
      901 aaatcgaagg ccagaacacg cctgcgatgt attgaccgga cgagatcaaa gcgatcgccg
      961 caccgcgccg ccggtcgaac caacgactca cgtaaatcag cagcggtgca tagatcgcgc
     1021 cgttgccgat caggccgaga aacaatccgt ggcccaggta aagcggaagg gcaccgccga
     1081 tcgtcgagat ggccaggcca agcgccatca taaccgcacc aataccgaca acggcccgga
     1141 tgccgatccg gtcggcgagc cagcccatcg ggatgccacc gagccccgtg ccgacccaga
     1201 ccagtgaccc ggccagagcg atgaccgaac gatcagtgcc caaagcctcc tgaatcggct
     1261 tcaggccgac aacgatcagc agcggcgagc cataggagac tgagagaatc gccagcgtga
     1321 tgctggcggc tatccatgat ttgcgcccct cgatggtggg cggccgctct gacatggaca
     1381 cttctcctcg cgcgaccgtt gcgttcgatg cgttggaggg aagatagggt tcggactcgt
     1441 cgatcgacaa ccgcgcgggg cgcaggtcag atgttggcag gtgccaaggg tgggcggccc
     1501 cggatcagat cggacgcacg ttccgccaac atcatgacga tggcgttgat atgcgccgag
     1561 ggcatgtcgg gcagggcgga ggcatcgacc acgcgcaacc tctcaatgcc atgcacgcgc
     1621 aactccgggt caagcacgcc ctgggcgccg atggcacagg tccccagcgg atggttcacg
     1681 gtgatgacgg tctcgcggat ccaggcgtcg atttgcgcgt tcgtcaggat gccgggcgcc
     1741 ggtgcgaccg gtgcaccgcg aaatcggtcc attggtttct gcccagcaac gtcacgcgcc
     1801 agatgatagg cgttgcgcag cgtggggagg tcctccggcg ccgaaaggaa attgaacgca
     1861 atccgcaccg gcgcggccgg atcggccgac cgcaatgtga ccgatccctg actgcgtgga
     1921 tgcaacagaa tcggccggat gcccatgacg tcctggtacg ctgcctgcaa accgggaatc
     1981 cacggccggg tctcgagcgt gcgcaccgcc agcaagaact cgatatccgg cacttccaga
     2041 tccgggcggc tcttgacgaa cgcgatctcg cccaggggca gggttgttgc tggaccggtg
     2101 cggaacagca gggcacgggc catattgagt gcggcacgat cgagccgcag ttgaccatgg
     2161 aatggtccgg gttcgagccg gttccagatc agcgccaccg agaggtgatc ccgtaaattg
     2221 cgccccaccg gcagatcggc cattgcgccg atcccgagtg cgcgaagttg atcggcaggg
     2281 ccgatgc
//
LOCUS       DATAVD010001027         2788 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1772761, whole genome shotgun sequence.
ACCESSION   DATAVD010001027 DATAVD010000000
VERSION     DATAVD010001027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2788
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1772761"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            760..2235
                     /gene="istA"
                     /locus_tag="VHX39_19590"
     CDS             760..2235
                     /gene="istA"
                     /locus_tag="VHX39_19590"
                     /inference="COORDINATES: protein motif:HMM:NF033546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEX3993383.1"
                     /translation="MIDYETFAKIHDCRDRQGLSIAQTARTLGLHPQTVATWLKRARF
                     EPRRLRPRGSILDSFKARITRLLDSHPYSAQQILQRLREEGYDGGVTILRDYVRRIRP
                     PKRPVYLKLHFAPGECAQVDWGAYGTVVVDNTRRRLSFFVIVLAFSRRMYVEFTVSQT
                     MEHFLGCHEHAFAAFGGVPSKIMVDNLKSAVLQRLAGAAPVFNPRYHDFARHHGFAIA
                     PCNVGRGNEKGRVESGVGYVKKNFLHGIELTDFSSVQAAAQVWLDTIANVRIHGETQQ
                     RPVDLFAQERQYLRPLNPNPYDIARTATCVASSQFRITLDTNHYSVPASYAHRRVILK
                     AYPDRVCIYFDNQLIARHARCYGRHLDIEDKDHAKVLIAQRSRAREQRLMMHFLALSP
                     DAAAYYDGLEQRRLNARHHVRKILALAEIYPADAMARAISDGLAFQAFSAEYITNILE
                     ARARALPQPGPLQLTRRHDLLDIDIAPPDLTAYEVNDHDAE"
     gene            2222..2743
                     /locus_tag="VHX39_19595"
     CDS             2222..2743
                     /locus_tag="VHX39_19595"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3993384.1"
                     /translation="MTPSDQTQLETQLQRLHLHHIKSHYQAAATMAAEQQCSYVDYLA
                     WLIEGETTLRDNRSIERRIRNARFPVLKTLEEFQWSWPKKINRPQIQNLFRLAFVATQ
                     TNVVLIGNVGLGKTHLSIALGHAACLNGHTVLFTTAVDIINTLAAAQSAGRLKRELAR
                     YLKPAVLIVDELG"
BASE COUNT          523 a          946 c          782 g          537 t
ORIGIN      
        1 gcaacttcgg cagcgtcccg gcgaacacca tcatgtgctc atacttcgtg ctctcgcgga
       61 tttcacggaa tagtgtcagc gccggtttga atttcggcta aaaccggcgg gttgaaattc
      121 attatctgcg gcgcggccgg gatggccgtt tgatcggcgt agggcagaag gaaaagctcg
      181 tcggttgttt gtcggatcga aacgggcggt ccattgcgtt tgcggatgat gcgtcctcgc
      241 cggaggggac gcgatgggct gtaaggagcg ccgcaagtgc aagtgctgtc ataagttatt
      301 tcgccctgac ccgcgcaacc gtcgtcacca gatttactgt tcagcggctg cctgccgcgc
      361 cgccagcaag gccgccagtc aggcgcgctg gctcgccaag ccggacaacc agaattactt
      421 ccgcggcccc gtgcatgtcg ctcgggttcg gacgtggcgg tcgcgccatc cggggtattg
      481 gcgccagggg cagcacgccg gttctgcgtt acaagatgtc tgggtggcgc aacctcttgg
      541 ttctgctgac aaaacagacg atgccgcagg cgcgccgtta caagaactct tatcggcaca
      601 acctgctgtt ctgattggct taatcgccca tctggtggga acgccgttac aagatgacat
      661 cgtgcgcacc gccggccgcc tgctacggct gggccaggac attctcgcga catccgcagc
      721 gcggactggc gctccccgtg tcggattgcg gagccggtgg tgatcgacta cgagactttc
      781 gcaaagattc acgactgtcg tgatcgccag ggcctgtcga ttgcgcagac tgcccggaca
      841 ctgggccttc atccgcagac ggtggcgaca tggttgaagc gggcgcgctt cgagccgcgg
      901 cgcttgcggc cgcgtggcag catcctggat tccttcaagg cgcgcatcac gcggctgttg
      961 gacagccacc cttacagcgc tcagcagatt cttcagcgcc tgcgcgagga gggctacgac
     1021 ggtggcgtga cgatcctgcg cgattacgtc cgccgcatcc gccctcccaa gcggccggtc
     1081 tatctcaaat tgcacttcgc tcctggggag tgcgcgcaag tcgactgggg cgcttacggc
     1141 accgtcgtgg tggacaatac ccgtcgccga ctttcgttct tcgtcatcgt gctggccttc
     1201 agccgccgca tgtatgtgga attcaccgtc tcgcagacca tggagcattt tctcggttgc
     1261 cacgagcacg ccttcgcggc attcggcggc gtgccttcca aaatcatggt cgacaatctc
     1321 aaatcggcag ttctgcagcg cctggccggc gccgcgccgg tcttcaatcc gcgctatcac
     1381 gacttcgccc gccaccacgg ctttgcgatc gccccttgca atgtcggtcg tggcaatgag
     1441 aaggggcgcg tggaatccgg agtgggctac gtcaaaaaga atttcctgca cggaatcgaa
     1501 ctgaccgact tcagttccgt ccaggcagct gcacaagtgt ggctcgatac catcgccaat
     1561 gtgcgcatcc acggcgaaac gcaacagcgg cccgtcgatc tgttcgcaca ggagcggcag
     1621 tatctgcggc cgctcaatcc gaacccctac gacatcgccc gcactgcgac ctgtgtggcc
     1681 tccagccagt ttcgcatcac cctggacacc aatcattatt ccgttccggc gagctacgcc
     1741 caccgccgcg tcattctcaa agcctatccg gaccgggtct gcatctactt cgacaatcag
     1801 ctcatcgccc gccatgcccg ctgctatggc cgtcatctcg acatcgagga taaagatcat
     1861 gccaaagtgc tgatcgccca gcgcagccgc gcccgcgaac agcgtctgat gatgcacttc
     1921 ctggcgctgt caccggatgc ggctgcctat tacgacggcc tggagcagcg ccggctcaat
     1981 gcccgccacc acgtccgtaa aatcctggcg ctcgccgaga tctaccccgc cgacgccatg
     2041 gcgcgcgcca tctccgacgg cctcgccttc caggccttca gcgccgagta catcaccaac
     2101 atcctggagg cccgcgcccg cgccttgccg caacccggcc ccctgcaact cacccgccgc
     2161 cacgacctcc tcgacatcga tatcgcgcca ccggacctca ccgcctacga ggtaaacgat
     2221 catgacgccg agtgaccaga cgcaattgga aacgcaattg cagcggttgc atctgcacca
     2281 catcaaaagc cactatcagg ccgccgctac catggccgcc gagcagcagt gctcctacgt
     2341 ggattatctc gcctggctca tcgagggcga gaccacgttg cgcgacaacc gcagcatcga
     2401 gcgccgcatc aggaacgcac gttttccggt gctcaagacc ctcgaagaat tccagtggag
     2461 ctggcccaag aagatcaacc gtccgcaaat ccagaacctg ttccgcctcg ccttcgtcgc
     2521 cacccagacc aacgtcgtgc tgattggcaa tgtcggcctc ggcaagacgc atttgtcgat
     2581 cgcgctgggc cacgcagcct gcctgaatgg acacacggtg ctcttcacca ccgccgtcga
     2641 tatcatcaat accctggctg ccgcccagtc cgccggccgc ctcaagcgtg aacttgcccg
     2701 ttacctcaag cccgccgtcc tcatcgtcga tgaactcggc taacttccca tcgataagca
     2761 cggcgccgac ctgctgttcc agatcatc
//
LOCUS       DATAVD010001028         6317 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1216517, whole genome shotgun sequence.
ACCESSION   DATAVD010001028 DATAVD010000000
VERSION     DATAVD010001028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6317
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1216517"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2346
                     /locus_tag="VHX39_19600"
     CDS             <1..2346
                     /locus_tag="VHX39_19600"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3993385.1"
                     /translation="PADEPAPEHATAEPAARGPSANRDATADTDRAALGTALATARTL
                     VDQGLIEIAERTLEQTRQRFPERAEPLIEYARIAETQRNWVVMAARYTVLRIRFPDEV
                     LGYRGGARARCELGRLDEADALLEVAMNRFPNEPKVFIDYGRIAELRKDWPGMADRFT
                     EVRQRFPDNSEGYTGSAQALSMIGRTEDAEALLEAGQQRLPNEAALFVDHARMAELRR
                     DWLALESRCAPLRERFPGEPWPYVGGAMALRNLGRYDEADALLTDADLRFPINASFWV
                     EYARSADARGDWEEALSRCKVIREHFPDVAWGYVGAANALDHLGRRDQARLMMEAGLA
                     HVPAEADPFAAYCWLAQNRQAWPEAITRWEAYRRRFPDRAVGYSAESIALREQSRLDE
                     AEALVGEGLRRHPDDSELLANFAFVAAARKDWAQALIRWQAYVDRFPDQAAGYIHLGA
                     ARRELKQFDEADAILRDALSRFPENRDIISNLARNAYQRGDRLEALRRWKTYCERFPK
                     DPLGPEQAKLVLQELGYYNTASNALQLGHGSIVGQLCKELYGGDSPLAHADRQYVDAS
                     YNPMNLRPELIESVIDVVRPRFWLELGSILGGSAIRTAGVIKAQMAPTEIVCIDPFTG
                     DVSMWAQEQPKKQAGEWQFLRLERGRPTLYDRFLANVAASDHADIILPIAATPIVGIR
                     LLQRLSVEQRLAALPDVIYFNSAREPDETFLELQNSWDLLRSGGVLMGSAWDAVRNDV
                     LRFVETVSISADARQRLSERHKRFVEQEGVLVDRGQWVLTK"
     gene            complement(2351..3157)
                     /locus_tag="VHX39_19605"
     CDS             complement(2351..3157)
                     /locus_tag="VHX39_19605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3993386.1"
                     /translation="MTEPKLTMPKLGLGTYQMHGAECQAAVESALALGYRHIDTGQMY
                     GNEAAVGAAIAASGVPRAEIFLTGKVCHALATPDEARASLDASLDRLQTDYLDLCLLH
                     WPRTGLDIPGILEMLMQAQETGKTRRIGVANFTIPLLQTAIADVGAPLSCNQVEYHVL
                     LDQARLLTWLRAQNMMLVAYVPLARGRLVDHPALAAIGAKHRATAAQVALKWLLDQDG
                     VAAIPKAGRTVSQRDNLGALDLTLDEADRQIIAGLPKDVRVVNPPHAPKW"
     gene            complement(3182..4237)
                     /locus_tag="VHX39_19610"
     CDS             complement(3182..4237)
                     /locus_tag="VHX39_19610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HEX3993387.1"
                     /translation="MSQTKKAEFLVETRGEQRMLDAFVVAARFSRDGRTVAFGMGDGT
                     TRLVAAANPSAEWHAVEVHDGATLCLAPDTGPSGFLSGGDDGSLRRIAAIGEVSDIAS
                     FGMKWVEQLASHALDKGKGLIAAGVGKSVHLFDETGNKLKEWTHPSTVTGLTFDTKGK
                     RVATSHYNGATLWFVAAKVDTPRRLEWKGSHIALAFHPEGEAVVTAMQENALHGWRLP
                     DGQHMRMSGYPTKTTSMSFSKGGKWLASSGSDAMVLWPFFGGGPMGKAPIELAGGDGV
                     NCTVVACNPKEELVAGGFEDGLVVIADIGSSRILPVSPPGNGPVTALAWSPDGTRLAL
                     GTENGFAAMVDFAKRQG"
     gene            complement(4248..5213)
                     /locus_tag="VHX39_19615"
     CDS             complement(4248..5213)
                     /locus_tag="VHX39_19615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX3993388.1"
                     /translation="MAELIPVTVLTGYLGAVKTTLLNRILTENHGRKYAVVINEFGEL
                     GVDNDLVVDTDEEVFEMNNGCICCTVRGDLIRIVGGLMKRRDKFDGIIIETTGLANPA
                     PVAQTFFVDEGVKARTRLDAIVTVVDAKHLPARLADSHEAEDQIAFADVIVLNKTDLV
                     TPEELDAVEARIKTINRHAIIHRTQRAALPIDQVLHRGAFDLSRILTMEPDFLDGDDE
                     HEHNEDITSLSFEVEQPIDPEKFNAWIGALLQEQGPDLLRTKGILSYANEPRRFAFQA
                     VHMIADGDFISEWKEGDPRTSRIVFIGRNLNRPRLRRGFEGCVAD"
     gene            complement(5265..>6317)
                     /locus_tag="VHX39_19620"
     CDS             complement(5265..>6317)
                     /locus_tag="VHX39_19620"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HEX3993389.1"
                     /translation="PLPALHVGEGGSRSLVQAIVFVRFFVLAAALEHSILRSARTRRW
                     LYWLIAASAAYIAVGVVFQLFTGYGFWGDPIADEGVLTGPFRGPRAGTPFVLMLFPAI
                     IPWAAALLTQPGIRSLIGTWILLIGGVAIALLIGQRMPFLLTLLGLAVIGLLLPRLRW
                     GVLAAAAVAGILLVASPDVAPSAHFRLVEKFSRQMEHFAVSPYGELYTRAFEIGVQNP
                     ITGLGAEGMRTGCANPRYFRPSFDGSLPDGGGASFCWVHPHSYYFEALVNGGFPGLIL
                     FCAEAVAWLLALGRGLWRQPEPLRVALFAAALMELWPIASSTSFTSMPVGGWAFLLLG
                     WGLAETRWLNRRNDPI"
BASE COUNT         1212 a         1966 c         1994 g         1145 t
ORIGIN      
        1 cccgctgacg agcccgcgcc tgagcacgcg acagcggagc cggctgcccg cggaccatcc
       61 gccaatcggg atgctacggc cgataccgat cgggcggcac tcggcaccgc actggcaacg
      121 gcccgcacgc tggttgacca aggcctgatc gagattgccg agcgaacgct ggaacaaacc
      181 aggcaacggt ttcccgaacg ggcggagccg ctgatcgaat atgcgcggat tgcggaaacg
      241 caacgcaatt gggtggtgat ggcggcgcgc tacaccgtgt tgcggatccg ctttcccgat
      301 gaagtactgg gctatcgtgg tggcgcgcgc gcccgctgcg aactggggag gctggacgaa
      361 gccgacgcac tgctcgaagt ggcaatgaac cggttcccca acgaacccaa ggtattcatc
      421 gactacggcc ggattgccga actccgcaag gactggcctg gcatggcaga ccgtttcacc
      481 gaggttcgtc agcgctttcc cgataattcg gagggttata ccggcagcgc ccaggcgctg
      541 agcatgattg ggaggacgga ggacgcggag gctttgttgg aggcaggcca gcagcggttg
      601 ccgaacgaag cggcgttatt cgtcgatcac gctcgcatgg cggaactgcg gcgagattgg
      661 ctggctctgg aatcacgttg tgccccactg cgggaacggt ttcccggcga gccatggccg
      721 tatgtcggtg gcgcgatggc gctgcgcaat ctgggtcgtt acgatgaagc cgatgcgctg
      781 ctgaccgatg ccgatctgcg gtttccgatc aatgcgtcgt tctgggtcga gtatgcccgc
      841 tcggccgatg cccggggcga ttgggaagaa gcgctgtctc ggtgcaaggt catccgcgaa
      901 cactttcccg atgtcgcgtg gggctacgtc ggcgccgcca acgcattgga tcatctcgga
      961 cgccgggacc aggcacgcct gatgatggaa gctggactgg cgcacgtccc ggctgaggcc
     1021 gatccgttcg cggcctactg ctggctggcg cagaatcgcc aggcgtggcc cgaggccata
     1081 acgagatggg aagcctatcg ccggcgattt cccgaccgcg ctgtcggtta ttccgcggaa
     1141 agtattgcat tacgagaaca atcacgcttg gacgaggcgg aagctctggt cggcgaaggc
     1201 ttgcggcgcc accctgacga tagcgaattg ctggccaatt ttgccttcgt cgccgccgct
     1261 cgcaaggact gggcgcaggc gttgatccgc tggcaagcct atgtcgatcg ctttccggat
     1321 caggcggccg gctatatcca tctcggggca gcccgccgcg agctgaaaca gttcgacgaa
     1381 gccgatgcca tactgcgcga cgcgttgagt cggtttcccg aaaatcgcga catcatcagc
     1441 aaccttgccc ggaatgccta ccaaaggggc gaccggctcg aggccttgcg gcgctggaaa
     1501 acctattgcg agcggtttcc caaagatcct ctgggtccgg agcaggcgaa gctggtcctg
     1561 caggaactcg gatattacaa taccgcaagc aacgcgctgc agctcggcca cgggagtatc
     1621 gtcgggcagt tgtgcaagga actttacggc ggcgacagtc cgctggccca tgccgatcgg
     1681 caatatgtcg acgccagcta caatcccatg aacctgcggc cggaattgat cgaaagtgta
     1741 atcgacgtgg ttcgcccgcg tttctggctc gaactcggtt ccattttggg cggttctgcg
     1801 attcgcactg ccggggtcat caaggctcag atggcgccga ccgaaatcgt gtgcatcgac
     1861 ccattcaccg gcgacgtgag catgtgggct caggaacagc cgaagaagca agctggcgaa
     1921 tggcaatttc tgcggctgga acgcggcagg ccaacccttt acgaccggtt tctggcgaac
     1981 gttgccgctt ccgatcacgc cgacatcatt ctgccgatcg ccgcgacgcc cattgtcggc
     2041 atcaggctgc tgcaacgtct ttccgttgag cagcggctcg ccgcgttacc cgacgtgatt
     2101 tacttcaaca gcgcacgcga gccggatgag acatttctgg agttgcagaa cagctgggat
     2161 ttgctgcggt ctggtggtgt tctgatgggc agcgcctggg atgccgtgcg caacgatgtg
     2221 ctgcggtttg tcgaaaccgt cagtatcagc gcagacgcgc gccagcggct gagcgaacgg
     2281 cataaacgct tcgtcgagca ggagggcgtt ctggtggatc gcggtcagtg ggtgctgacg
     2341 aaatagcggg ctaccacttc ggggcgtgcg gcggattaac cacccgtacg tctttcggta
     2401 acccggcgat gatctgccga tccgcctcgt ccaatgtcag atcgagtgcc ccgagattgt
     2461 cgcgctggct gacagtgcga cctgccttcg ggatcgccgc gacaccgtcc tgatccagca
     2521 accacttcaa cgccacctgg gccgcggtcg cacggtgttt ggcaccgatt gccgccaacg
     2581 cgggatggtc gaccaggcgg ccgcgtgcca acggcacata ggccacgagc atcatatttt
     2641 gcgcccgcaa ccaggtcagc aacctggctt ggtcgagcag gacatgatac tcgacctgat
     2701 tgcaagacag cggcgcgcca acgtccgcaa tggccgtctg caacagcgga atcgtgaagt
     2761 tcgccacccc gatgcgccgc gttttccctg tctcctgggc ttgcatcagc atttccagga
     2821 tgccgggaat gtcgaggccg gtacggggcc agtgcaacag gcacaggtcg agataatcgg
     2881 tctgcaaacg atccagcgat gcgtccaacg aagcccgtgc ctcgtccggc gtggccaggg
     2941 cgtgacaaac cttgccggtg agaaaaatct ctgcgcgcgg tactcccgat gcggcgatag
     3001 ccgcgccgac cgccgcctca ttgccataca tctggccggt gtcgatgtgc cggtaaccga
     3061 gcgccagggc actctccacc gcggcctgac attcggcccc gtgcatttga tacgtgccca
     3121 gaccgagttt cggcatcgtc aatttgggct cggtcacgcc agcctccgtt gcatggttgc
     3181 gtcacccctg ccgtttggcg aaatcgacca ttgcggcaaa cccgttttcg gttcctaacg
     3241 caagccgagt gccgtccggg ctccacgcca atgccgtaac cggtccattc cccggaggcg
     3301 agaccggtaa aattcgggag gacccgatat cggcgatcac caccagaccg tcctcgaaac
     3361 cgccggctac cagttcctct ttcgggttgc aggcaaccac ggtgcaattg accccatcgc
     3421 cgccggcaag ttcgatcggc gccttgccca tcggaccacc accgaagaac ggccacagca
     3481 ccatggcgtc ggagccgctg ctggccagcc atttgccgcc tttggagaac gacattgatg
     3541 tcgttttggt cgggtaacca ctcatgcgca tgtgctggcc atccggcaag cgccagccat
     3601 gcaaggcgtt ctcctgcatc gccgtcacca cggcttcacc ttcgggatgg aaggccagtg
     3661 ctatgtggct gcctttccac tccagccgtc gcggggtatc gactttcgct gcgacaaacc
     3721 acagcgtcgc gccgttgtag tgcgatgtcg ccacgcgttt gcctttggta tcgaaggtca
     3781 ggccggtgac ggtggaggga tgggtccact ccttgagctt attgccggtt tcgtcaaaca
     3841 aatgcaccga tttgccgacg ccggcggcaa tcaggccttt gcctttatcc agcgcgtggc
     3901 tggcgagttg ctcgacccac ttcataccga acgaggcgat gtcgctgacc tcgccgatcg
     3961 cggcgatccg ccgcaacgat ccgtcgtcgc cgccggacag gaagccgctc gggccggtat
     4021 ccggcgcaag gcacaatgtt gcgccatcgt gaacctcgac ggcgtgccac tccgccgatg
     4081 ggtttgccgc cgcgaccagg cgcgtagtgc catcacccat gccgaacgcg acggtccgtc
     4141 cgtcacgcga gaatcgcgct gcgacgacaa acgcgtcgag catccgttgc tcgccgcggg
     4201 tttcaaccag gaactcggct tttttggtct ggctcatgac gctggtctca atccgccacg
     4261 catccttcga aaccgcggcg cagccggggg cgattcagat tgcggccgat gaacacgatg
     4321 cggctggtcc gcggatcgcc ttccttccac tcgctgatga aatcgccatc tgcaatcatg
     4381 tgcaccgcct ggaaggcaaa ccgccgcggt tcgttggcat agctcaggat gcccttggtg
     4441 cgcagcagat cgggtccttg ctcctgcaac aacgcgccga tccaggcgtt gaatttttcc
     4501 ggatcgatcg gctgctccac ctcgaagctc agtgacgtga tatcctcgtt gtgctcatgc
     4561 tcgtcgtcgc cgtcgaggaa atccggctcc atcgtcagaa tgcgcgacaa atcgaaagcg
     4621 ccgcgatgca gtacctgatc gatcggcagc gccgcccgct gcgtacgatg aatgatggca
     4681 tggcggttga tcgttttgat gcgcgcctcg accgcatcga gttcctcggg cgtcaccaga
     4741 tcggtcttgt tcagcacgat gacgtcggcg aaggcgatct gatcctcggc ctcgtggctg
     4801 tcggccagac gcgccggcag atgcttggcg tcgaccacgg tcacgatcgc gtccaaacga
     4861 gtgcgggcct tgacgccttc atcgacgaaa aaggtctgcg cgaccggcgc cgggttcgcc
     4921 aatccggtgg tctcgatgat gatgccgtcg aatttgtcgc gccgcttcat cagcccgccg
     4981 acgatacgga tcaggtcgcc gcgcacggtg cagcagatgc agccgttgtt catttcgaag
     5041 acttcctcat cggtgtccac gacgaggtcg ttgtcaacgc ccagttcacc aaattcgttg
     5101 atgacgacgg cgtatttgcg accgtggttc tcggtcagga tgcggttgag caaggtggtt
     5161 ttgacagccc cgagatagcc ggtcaacacg gtcaccggta tcagttcagc catgggtcac
     5221 gctccgggtg tcaggatgtt gacccctaca tagggtcgct ccgcctatat agggtcgttc
     5281 cggcggttca gccaacgtgt ctcggcgagg ccccagccaa gcagcagaaa cgcccagccg
     5341 ccgaccggca tggaggtgaa actggtggac gaggcgatcg gccagagttc catcaacgcg
     5401 gcggcgaaca gcgcgacacg caaaggctcc ggttggcgcc acaggccgcg gcccagggcg
     5461 agcaaccagg cgaccgcctc ggcgcagaac aggatcaaac cgggaaaacc gccgttgacc
     5521 agcgcttcga agtaatagct gtgcgggtgg acccagcaga acgacgctcc gccgccatcg
     5581 gggaggctgc catcgaacga gggtcggaaa tagcgaggat tggcgcagcc ggtccgcatg
     5641 ccctcggcgc cgaggccggt gatggggttt tgcacgccga tctcgaacgc gcgggtgtag
     5701 agttcgccgt acgggctgac cgcaaaatgc tccatctgcc gcgaaaattt ttccacaagc
     5761 cgaaaatgtg cactgggtgc cacgtccggc gaggcgacca atagaatgcc ggcgaccgct
     5821 gccgctgcga gcacgcccca gcgcaatcgt ggcagcagca atccgatgac cgcgaggcca
     5881 agtaaggtca gcagaaacgg catgcgttgg ccgatcagca gcgctatggc cacgccgccg
     5941 atcagtaaaa tccatgtccc gatcagggac ctgatgccgg gctgggtgag cagagcggca
     6001 gcccagggaa tgatggcggg aaagagcatg aggacaaaag gggtgccggc gcgggggccg
     6061 cggaacgggc cggtcagcac gccctcatcg gcgatcgggt cgccccaaaa gccatagccg
     6121 gtgaacagct gaaagaccac cccgacggca atgtaggcag cggaggccgc gatcagccag
     6181 tacagccaac gccgggtcct ggctgaccgc aagatggaat gctccagcgc cgcggcgagg
     6241 acgaaaaacc gcacgaatac aatggcctgc accagggaac gcgagccgcc ctcgcccaca
     6301 tgcagggccg ggagggg
//
LOCUS       DATAVD010001029         2132 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1959200, whole genome shotgun sequence.
ACCESSION   DATAVD010001029 DATAVD010000000
VERSION     DATAVD010001029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1959200"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..262
                     /locus_tag="VHX39_19625"
     CDS             <1..262
                     /locus_tag="VHX39_19625"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014250158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3993390.1"
                     /translation="GAGGCLITDAWDGIEMFLAPGTEVLIARDGSDVVEILRRLSAVD
                     AAAIGRAARRRILAEHTYDRRAALLHRVLSDALAARREVLAA"
     gene            259..1425
                     /locus_tag="VHX39_19630"
     CDS             259..1425
                     /locus_tag="VHX39_19630"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3993391.1"
                     /translation="MKERPLDLVFLGLSLSSSWGNGHATTYRALLRGLAGHGHRVLFL
                     ERDMPWYASARDLVQPDFCELEFYHGVEELHSRFGARIAAADAVVVGSYVPDGIGVLE
                     LVNRTAGGVRAFYDIDTPITVAALETDRCTYLAAEQVPLLDLYLSFTGGPLLRHLAQR
                     FGARRPCALYCSVDAARYRPALLPIRWDLGYLGTYAEDRQATLQRLLIEPARRLPDRR
                     FVVAGPQYPGSIDWPANVERIEHLPPSEHVAFYCRQRFTLNVTRADMIRTGWSPSVRL
                     FEAAACGTPIISDYWDGLDALLPHADAVLVAEHADDVVTELREMDAISRARIGENARR
                     IVLNEHTGAARGRELERYIRAVLNSDEAQTSPVPQQYTLPDSTVRRRIPRQFPL"
     gene            complement(1507..>2132)
                     /locus_tag="VHX39_19635"
     CDS             complement(1507..>2132)
                     /locus_tag="VHX39_19635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit E"
                     /protein_id="HEX3993392.1"
                     /translation="VAMAVGGILLAGAPVGLMDEGTRLIDAAGMQAGHGWAVLAVVLS
                     ASLTGGTVLRSAGRIFLGLGEVPGEEERAPTEQEQEDSNRPLWVMLAPCVVLLVLALC
                     GGERARELARNAAGQFIDPVHPVALDPLPEATHPFLPWLSMALAVGIAGFDLFRRYLP
                     KPAVQLGSAVSAPLFHVLSSLHSGLVGDYVAWIVVGLAVFAIAFVLA"
BASE COUNT          373 a          712 c          668 g          379 t
ORIGIN      
        1 cggtgccggt ggttgcctga tcaccgatgc ctgggacggc atcgagatgt ttctggcccc
       61 cggcaccgag gtgttgatcg cgcgtgacgg atcggacgtg gtcgaaattc tgcgccgcct
      121 gagtgccgtg gacgctgccg cgatcgggcg cgcggcgcgc cgacgcatcc tcgcagagca
      181 tacttacgac cggcgggccg ccctgctgca tcgcgtactg agcgatgcgt tggcggccag
      241 gcgcgaggtg ctggcggcat gaaggagcgc ccattggatc tggtgtttct cgggctatcg
      301 ctgtcgtcgt cttggggcaa tggccacgcg accacctatc gcgcgttact gcggggtctg
      361 gcagggcatg gccatcgcgt gctgttcctg gaacgcgata tgccgtggta cgcctccgcg
      421 cgtgatctcg tgcagccgga tttctgcgaa ctcgaattct accacggcgt ggaggaactg
      481 cattcccgtt tcggcgcacg catcgccgct gcggatgcgg tcgtggtcgg ctcctatgtg
      541 cccgacggca tcggggtgct cgaactggta aaccgcaccg ccggcggcgt gcgggcgttc
      601 tacgacatcg acacccctat caccgtggct gcactggaaa ctgaccggtg tacctatctc
      661 gcggctgaac aggttccatt gctcgacctg tatctctcgt tcaccggcgg gccattgctg
      721 cggcatctgg cacagcgctt cggcgctcgc cggccctgtg ccctgtattg ttcggtcgat
      781 gccgcgcgtt accggccagc gctgctgccg atcagatggg atctcggcta tctcggcacc
      841 tatgcggagg accggcaggc aacattgcag cgcctgttga tcgagccggc gcgccggcta
      901 ccggaccggc gcttcgtggt tgccgggccg caatacccgg gctccatcga ttggccggcc
      961 aatgtcgagc gcatcgaaca tctgccgccg tcagagcatg tcgcgttcta ttgccgccag
     1021 cgcttcacgc tgaacgtcac gcgcgccgac atgatccgca ccggctggtc gcccagcgtg
     1081 cgcttgttcg aagccgctgc ctgcggcacg cccatcatca gcgactattg ggacgggctc
     1141 gatgcgctgt tgccgcatgc cgatgccgtc ctggtggcag agcatgcgga cgatgtcgtc
     1201 accgaattgc gcgaaatgga tgcgatatcg cgcgctcgca tcggcgagaa cgcccgcaga
     1261 attgtgctga acgaacacac cggcgcagca cgcggacgcg aactggagcg ttacatccgg
     1321 gcggtgctga attctgacga ggcgcagact tcgccagtgc cgcagcaata cacattgcca
     1381 gacagcacag tgcggcgccg gattcctcgg cagtttcctc tgtgagcgat tgatgacgac
     1441 ggctatcgtg tgatccgcct ggacaatctc cgcaccggct ccgccgacaa tctacggcgg
     1501 caggtttcat gccaagacga acgctatcgc gaacaccgcc aggccgacca cgatccaagc
     1561 cacgtagtcg ccgaccaatc cgctgtgcag cgaactcaac acgtggaaca agggcgcgga
     1621 cacggcactg ccaagctgca cagccggctt gggcaggtat cgccggaaca ggtcgaaacc
     1681 tgcgatccct accgccaaag ccatcgatag ccagggcaag aaaggatgcg tcgcctcggg
     1741 cagtgggtcg agcgcgaccg ggtgaacggg atcaatgaat tgaccggccg cgttccgggc
     1801 aagctcgcga gcccgttcgc cgccgcacaa cgccaatacc agcaacacaa cgcaaggcgc
     1861 cagcatcacc caaagcggac ggttactgtc ctcctgttct tgctctgtgg gggcacgctc
     1921 ttcctcgccg ggcacttcgc ccagccccag gaagatgcgt ccggccgagc gcagcaccgt
     1981 accgcctgta agagaagctg acaacaccac cgccagcacc gcccagccat ggccggcctg
     2041 cattcccgca gcatcgatca ggcgtgtgcc ttcgtccatc agtccgaccg gtgcgccggc
     2101 gagcagtatt ccacccaccg ccatcgctac gc
//
LOCUS       DATAVD010001030         1919 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2704139, whole genome shotgun sequence.
ACCESSION   DATAVD010001030 DATAVD010000000
VERSION     DATAVD010001030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2704139"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(172..1275)
                     /locus_tag="VHX39_19640"
     CDS             complement(172..1275)
                     /locus_tag="VHX39_19640"
                     /inference="COORDINATES: protein motif:HMM:NF025627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfotransferase family protein"
                     /protein_id="HEX3993393.1"
                     /translation="MYTVAPELSAHLIDMKGRELHRWSVSRDAVMPEAGRRAWTLFGA
                     IKPQVETGHLFANGDLLLIYEQSGLAPSDSALIKLDKDSHILWKTQIKVHHAIAVVDH
                     QIYALSSVNRPAGRELNPFAVATVDQAVSTLSPDGTVLSTHSILDAMLNTTSMRLANI
                     AAIGEPLDPLHVNSIDVLNSQNARFIPGATPGDVLLSLRNLDMLAVVSLHTNRVIWAL
                     RGAWRRQHDVKMLPNGHILMFDNQGGLTSHGRSRVLEVMPDSGAIVWSFAGTDGNSID
                     SEVRGGAQRLSGGNTLISESATGRRLEVAPDGAVVWEYVHPEGAMEDGRKIVASSGLT
                     VTRYDTSRLSFLENPARIGGTAQTATSSCDPCP"
BASE COUNT          380 a          584 c          573 g          382 t
ORIGIN      
        1 cgccggatga cgcccgctgg gaaataacca cgcagttcaa attaaccacc caatcgccgg
       61 gcggtgccaa gcctcagatt cggccatcag cccgctgcag cgcgccgagg cgaaaagtcg
      121 caacataagg agccgaccat acagattaat ccgcacctga gctcaagaac tctacgggca
      181 tgggtcgcac gatgaggtag cggtttgtgc cgttccgccg atgcgcgcag ggttttccag
      241 gaacgaaagc ctcgacgtat cataacgggt aaccgtcagc ccggacgaag cgacgatttt
      301 gcgaccgtcc tccatcgcgc cctcaggatg tacatattcc caaaccaccg cgccgtccgg
      361 cgctacttcg agacggcgac cggtcgcgga ttcgctgatc agcgtgtttc cgccggatag
      421 gcgttgcgct ccgcctcgga cttcgctgtc gatagagttg ccatccgtcc cggcgaagga
      481 ccacacaatg gcgccgctgt ccggcatgac ttcgagcacc cgcgaccgtc catgggacgt
      541 aaggccgcct tggttgtcga acatcaggat atggccattc ggcagcattt tcacatcgtg
      601 ctgccggcgc caagcgccgc gcaatgccca gattacgcgg ttggtatgga gactgactac
      661 agccagcata tccaaattgc gcagcgataa gaggacatcg ccgggcgtag cgccaggaat
      721 gaaacgggcg ttctgactat tcagcacgtc gatcgaattg acgtgcagtg gatcaagagg
      781 ttcgccgatt gcggcgatat ttgcgagacg catggacgtc gtattcaaca tggcgtcgag
      841 aatcgagtga gtactcagca cggtaccatc ggggctgaga gtgctcacgg cttggtcgac
      901 tgtggctacg gcgaacggat tcagctcgcg ccccgctggc cgattgacgc tgctcagggc
      961 atagatctga tgatccacga cggcgatcgc gtgatgcacc ttgatctgtg ttttccaaag
     1021 tatgtgcgag tccttgtcga gtttgatcag tgcgctatcc gatggtgcca gaccgctttg
     1081 ctcgtagatc aggagcaagt ctccattcgc aaacagatgc cctgtctcga cctgaggctt
     1141 gatggctccg aatagcgtcc acgcccttcg gcccgcctcg ggcatgacgg cgtctcggga
     1201 taccgaccag cggtggagtt cccgtccctt catgtcgatg aggtgagccg acagttccgg
     1261 cgcgacggtg tacaaggtgt agccgcgctg agcgcgggcc ggatcgtaac ggagcacgcc
     1321 tgattggctg aatcgcgccg ggtaccaatt gccggacccg gttctcccgg tgatctgctg
     1381 gctcgcccac tgcgcggtcg ccaggacatc catcgcctcc ggatgataga gggtgccgca
     1441 aacgaaccct ccgatcgcac cgcttgccag aacgacccgc caaaacgaca atcgccgctg
     1501 cctcttcggg cctgctcgca ccactgtttc catcatggta ggtcctgcgc acaggaggaa
     1561 tctcctgtcg acaccaatgc cgccatgttt ctggcgagat cgggatagaa attgccggtt
     1621 actgaggggc ccgcgataaa agagaagcgg ctgaaccgcc gcgagggttg cgggctttgg
     1681 ggcgcactat ccaccttttg tacatcttag gctgcctgac accgcggagt gggccctggc
     1741 cccggcgtgg tcatgacccg cttccgggaa cccggccgaa gtctgcggcg cgggacaccc
     1801 tttgggctag atttgtgccg atgtggcaat cctgcgcaag gatggttctt aaatgaaccc
     1861 gtcacagctc ttcatcctgc gtccagtcgc gaccgcgctg ttgatggtcg ccattatgc
//
LOCUS       DATAVD010001031         4919 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2329953, whole genome shotgun sequence.
ACCESSION   DATAVD010001031 DATAVD010000000
VERSION     DATAVD010001031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4919
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2329953"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..849)
                     /locus_tag="VHX39_19645"
     CDS             complement(<1..849)
                     /locus_tag="VHX39_19645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX3993394.1"
                     /translation="MDSDISASTQDPASLEQRYATVRAHTEALAAHLTPEDQCVQSMP
                     DASPAKWHRAHVTWFFEEFVLRASRENYRVFDEDFRFLFNSYYEAVGARHPRPMRGLL
                     TRPEASRIGDFRAHVDDAMRRLLPRAPAETLSLIELGLHHEQQHQELLVTDMLDAFSK
                     NPLAPAVLPGWQEPAYASGAMQFLRCAGGVTGIGHDGDGFCFDNETPAHETLLPDFEI
                     ADRLVRNGDFLSFIDDGGYRTPSLWMSDGWATVQSNLWSAPAHWRDHDGDWKQMGPGG
                     LVALDPA"
     gene            complement(939..1328)
                     /locus_tag="VHX39_19650"
     CDS             complement(939..1328)
                     /locus_tag="VHX39_19650"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX3993395.1"
                     /translation="MTEIQRLMVEGQPAPFSHYCHVVRAGELIWVSGALGVAADGSVP
                     ENVATQTELALASIDACLKAAGAGPQHVTKINLYLTDVNDRSKINPARQRYFGPHRPA
                     STLVGVTALVIPDAKVEIEVTAVVPAP"
     gene            complement(1325..2683)
                     /locus_tag="VHX39_19655"
     CDS             complement(1325..2683)
                     /locus_tag="VHX39_19655"
                     /inference="COORDINATES: protein motif:HMM:NF012432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase family protein"
                     /protein_id="HEX3993396.1"
                     /translation="MSDTLPTATRVADPGIRALYQLENRWQAWLDVEVALAKAQAELG
                     IIPEAAAAAIAAKAKFSLMDRARIDEGFARTGHTIVPLVWELSRIVGEPHGGWVHWGA
                     TTQNITQTGDLLVLRQAHGIFLRQIGKVLSAMADLAERGADMPLPGRTHGQHALPATF
                     GYKVAVWIDEFLRHCDRLRDLSPRLFVSMLGGGAGTFASLGRQGPQVQAGIGKQLGFG
                     TMAVPSRALGDHLAENICVLGLIAATSGKIGREIYTLMKTEFGEVEEPVPPGTVGSST
                     MPQKRNPKLCQDIIAAAAEVRAMVPLALEAMMTEHEADRTTSLIMDAAEGRTCIAMGD
                     ILARLGEILQGLTLDPDRMRANLDLGHGLIMAEAVMLDLGKAIGRQHAHDVVYDAAQA
                     AFVENKSFSDLLMADQRVASRVDAAAMQKLLDPTLYTGLCADMAREQAALARAKAKEL
                     AA"
     gene            complement(2932..3321)
                     /locus_tag="VHX39_19660"
     CDS             complement(2932..3321)
                     /locus_tag="VHX39_19660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993397.1"
                     /translation="MVHPLRLLRIALEAERLRLGLHAGRTVRRAVMGCIGLVLLVGAF
                     GFGHVAAWYWLRETLVPKYVALIFAGTDLLFALLLFVLASRSTAGLAEVEALAVRRRA
                     LDDATDALRISAVIGRLLGQLLRSPPR"
     gene            complement(3321..3593)
                     /locus_tag="VHX39_19665"
     CDS             complement(3321..3593)
                     /locus_tag="VHX39_19665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993398.1"
                     /translation="MPDDARDATGRAEDAMAQITRLREQVETLMRDRVSPAMGEAAER
                     VQAAAHDAADVMQARADALAGAVRTQPLTAICIAAAVGFLLGRIGR"
     gene            3809..4660
                     /locus_tag="VHX39_19670"
     CDS             3809..4660
                     /locus_tag="VHX39_19670"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HEX3993399.1"
                     /translation="MHFGASMFFTDYSMTAQALGKALEERGFESLWAAEHSHIPVSRK
                     TPFSGGGDLPKPYYDAMDPFVVLTAAAMATKTLKLGTGVCLVNQRDPIQTAKLVASID
                     QVSGGRFLFGIGNGWNQDEMENHGTVFATRHKLVRERIEAMKAIWTQTRAEYHGEFVN
                     FDPMMTWPKPVQKPHPPIIVGGGFPYATRRAVRYGDGWYPTVGRPGLAAETLDLLPKF
                     QAMLKEAGRDPASCPLSLSSAPLDLELFKRARDLGVERISVALTAATEAEAVPILDKW
                     ADVMAKV"
     gene            4675..>4919
                     /locus_tag="VHX39_19675"
     CDS             4675..>4919
                     /locus_tag="VHX39_19675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3993400.1"
                     /translation="MQFGASIFFTDYSISPGDLGWALESRGFESLWAAEHSHIPLSRK
                     SPWGGGGELPKQYYDVMDPFVTLTAAAAVTKQLKLGTG"
BASE COUNT          918 a         1559 c         1537 g          905 t
ORIGIN      
        1 ggcgggatcg agcgctacca gaccaccggg tcccatttgc ttccagtccc cgtcgtggtc
       61 ccgccaatgc gccggtgccg accacaggtt gctctgcacc gtcgcccaac cgtcagacat
      121 ccacagcgat ggcgtgcgat agccaccgtc gtcgatgaac gacagaaaat caccatttct
      181 gaccaggcgg tcggcgattt cgaagtccgg caacaaggtc tcgtgcgccg gcgtttcgtt
      241 gtcgaagcaa aacccgtcgc cgtcgtggcc aatcccggtc accccgccgg cacagcgcag
      301 aaactgcatg gcaccggagg cataagccgg ttcctgccac cccggcagca ccgcaggcgc
      361 caacggattc ttcgagaatg cgtcgagcat gtcggtgacc agcagttcct ggtgctgctg
      421 ttcatggtgc aggccgagtt cgatcagact cagcgtttcg gccggcgcgc gcggcagcaa
      481 acgtcgcatg gcgtcatcga catgggcgcg aaagtcaccg atccgggagg cttcgggacg
      541 ggtcaacaag ccgcgcatcg gccgcgggtg gcgggctccg accgcttcgt aataggaatt
      601 gaacagaaac cggaaatcct cgtcgaacac ccggtagttt tctcgcgagg cgcgcagcac
      661 gaactcctcg aagaaccagg tgacatgggc gcgatgccat tttgccggac tggcgtcggg
      721 catcgactgt acgcactgat cctcgggtgt caggtgggcg gccagagctt cggtgtgcgc
      781 gcggaccgtt gcgtaacgct gctccaggga cgcggggtcc tgcgttgacg ccgaaatatc
      841 actgtccatt aaccagacgc tttccgttta tcgccagttt cgttcagacg agttttgtgc
      901 aggcgagcag cgcgcctgct tcgctggagg cacgcaggtc acggcgccgg aaccaccgcc
      961 gtcacctcga tttcgacctt cgcatccgga atcaccaggg cagtgacacc aaccaaagtc
     1021 gaggccggcc ggtgcggacc gaaatagcgt tgcctggccg gattgatttt gctgcggtcg
     1081 ttcacgtcag tcagatagag gttgattttc gttacgtgct gcggaccggc gccagcggct
     1141 ttcaggcacg cgtcgatact cgccagcgcg agttcggtct gcgtcgccac attttccggc
     1201 accgaaccgt ccgccgccac gcccagagcg ccggacaccc agatcagttc acccgctcgc
     1261 acgacatgac agtaatggct gaacggcgcc ggctggcctt caaccatcag gcgctggatt
     1321 tcggtcatgc cgccagttcc ttggctttgg cgcgcgccaa tgccgcctgt tcccgcgcca
     1381 tgtcggcgca cagccctgtg tataaagtcg gatccagcaa tttttgcatc gcagccgcat
     1441 caacccgcga cgcgacccgt tgatccgcca tcagcagatc cgaaaacgat ttgttttcca
     1501 caaacgctgc ctgtgccgca tcgtacacga cgtcatgcgc gtgctggcgg ccaatcgctt
     1561 taccaagatc aagcattacc gcctcagcca tgatcagtcc gtgacccagg tccaaattgg
     1621 cccgcatacg atcaggatca agcgtgaggc cttggagaat ttcacccaat cgtgccagaa
     1681 tgtcgcccat tgcgatgcag gtgcgaccct cggcggcatc catgatcagg ctggtggtgc
     1741 gatccgcctc atgctcggtc atcatcgctt cgagcgccag cgggaccatg gcccgcacct
     1801 ccgccgccgc tgcgataatg tcctgacaca gtttgggatt gcgtttttgc ggcatggtcg
     1861 agctaccaac ggtgccgggg ggaaccggtt cctcgacctc accgaactcg gttttcatca
     1921 acgtgtaaat ttcgcggccg atcttgcccg aggtggcggc gatcagaccc agcacgcaaa
     1981 tgttctcggc gaggtggtcg cccagtgcgc gggatgggac ggccatggtg ccgaagccga
     2041 gctgtttgcc gatgcccgcc tgcacctgcg gaccttgccg gccaagcgag gcaaaggtgc
     2101 cggcgccgcc gcccaacatg gagacgaaca gtcgcggcga caggtcgcgc agccggtcgc
     2161 aatggcgcag gaactcatcg atccaaaccg cgactttgta gccgaaggtg gcaggcaacg
     2221 cgtgctggcc gtgggtgcgt ccgggcagcg gcatgtcggc accccgttcg gccagatcgg
     2281 ccattgccga cagcaccttg ccgatctggc gcaaaaagat gccgtgggcc tggcgcagca
     2341 ccagaagatc gccggtctgg gtgatgttct gcgtcgttgc gccccaatgc acccaaccac
     2401 catgcggttc gccgacgatc cggctgagct cccacacgag aggcacgatg gtatggccgg
     2461 tgcgagcgaa cccttcgtcg attcgggcgc ggtccatcag cgagaatttc gcctttgccg
     2521 caatcgctgc cgctgctgcc tcaggaatta tccccagctc cgcctgggct ttggccagcg
     2581 cgacctcgac gtcgagccat gcctgccagc ggttttccag ttggtagagg gcgcggatgc
     2641 cagggtccgc gacgcgggtg gcggtcggga gagtgtcgct catgaacgcc tcggcctggg
     2701 gttcccgcga tgttaacggg tcgggtcagc gggggcaaat ttggggatga gagggtggtg
     2761 tgggttggtt cggtagacgg gattacaagt tgtctaaatg gtgtgcgcat gggccgggtc
     2821 tgtggcgtcc gaaccctcgc aaggaagtta ggctgtcgca acgggcagat gaagcctcga
     2881 cgccgcctca gacgtttgta ttggccgtga aattcggcag gtcctgcatc actaccgcgg
     2941 cggtgagcgc agcaattgtc ccagcaaccg cccgatgacc gcggaaatcc tcaacgcgtc
     3001 cgtcgcgtcg tccagggccc gccgacgcac agcgagtgcc tcgacctccg ccaacccggc
     3061 agtggaacgg gacgcgagga cgaacagcaa cagggcgaac agcagatcgg tcccggcgaa
     3121 gatcagggca acgtacttcg gcaccagggt ttcccgtaac cagtaccacg cagcgacatg
     3181 cccgaaccca aacgcaccga ccaacaaaac caacccgatg cagcccatca cggcgcggcg
     3241 cacggtgcga ccggcgtgca atccaagacg cagccgctcc gcctcgagag cgatgcgaag
     3301 gaggcggagc gggtgcacca tcagcggcca atgcggccga gcagaaaccc aacggcggcg
     3361 gcaatgcaga tggcagtcag cggctgcgtg cggacagcac cggcaagagc gtcggcccga
     3421 gcctgcatca cgtcggcggc gtcgtgggcg gccgcctgaa cgcgctcggc tgcctcaccc
     3481 atcgctgggc tcacccggtc gcgcatcagt gtttccacct gctcccgcag gcgggtgatc
     3541 tgggccattg catcctcagc ccgtcccgtt gcgtccctgg cgtcgtctgg catggcaatt
     3601 atcctttggt gccggtgtgc cggtgttgga ataccggcca catcgatcgc ggatcagtaa
     3661 cctttcatgg cacgataagt tgcattgatt tggatcattt ctgcaatgct ccgctcaccc
     3721 ccggccggac cagacgtgcc ggaccgggag tcgccgtgcc cctggttccg tgccatgctt
     3781 gcgatcctgg caaagcggga gggtggccat gcatttcggc gcgtcaatgt tcttcaccga
     3841 ctattcgatg accgcccagg cgcttggcaa ggcgctggag gagcgcggct tcgaatcatt
     3901 gtgggctgcc gagcactcgc acattccggt ctcgcgcaag acgccatttt ccggcggcgg
     3961 cgatctgccg aagccctatt acgacgcgat ggatcctttc gtggtgctca ccgccgccgc
     4021 gatggcgacc aaaaccttga aactgggcac tggggtttgc ctggtgaacc aacgcgatcc
     4081 gatccagacc gccaagctgg tggcctcgat cgatcaggtg tccggcggcc ggtttttgtt
     4141 tgggatcggc aacggctgga accaggatga gatggaaaat cacggcacgg tgtttgccac
     4201 gcgccacaag ctggtgcgcg agcggatcga ggccatgaaa gccatctgga cccagacccg
     4261 cgccgaatat cacggagaat tcgtcaattt cgatccgatg atgacgtggc cgaagccggt
     4321 gcaaaagccg catccgccga tcattgttgg cggtggtttt ccgtatgcca cgcgccgtgc
     4381 ggttcgttac ggcgacggct ggtatccaac ggtgggacgg ccgggcctcg cagccgaaac
     4441 gctcgacctg ctgccgaaat tccaggcgat gctaaaagag gccggccgcg atccggcgag
     4501 ttgcccgctg tcgctgtctt cggcgccact ggatctcgag ttgttcaagc gagcccgcga
     4561 tctcggcgtg gaacgcatca gcgtcgcgtt gaccgcggcg accgaagcag aggcagtgcc
     4621 gatcctcgac aaatgggccg acgtgatggc caaggtttga cggagactca gatcatgcag
     4681 ttcggcgcat ccatcttctt caccgactat tccatctctc ccggcgacct cggttgggct
     4741 ttggaaagtc gtggctttga atcgctgtgg gcagcagaac attcgcacat tccgctgtcg
     4801 cgcaaatcgc cctggggcgg cgggggcgag ttgccgaaac aatactacga cgtcatggat
     4861 ccgttcgtga ccctgaccgc cgccgctgcc gttaccaaac agttgaaact gggcaccgg
//
LOCUS       DATAVD010001032         2344 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1773027, whole genome shotgun sequence.
ACCESSION   DATAVD010001032 DATAVD010000000
VERSION     DATAVD010001032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1773027"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            202..744
                     /locus_tag="VHX39_19680"
     CDS             202..744
                     /locus_tag="VHX39_19680"
                     /inference="COORDINATES: protein motif:HMM:NF014471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEX3993401.1"
                     /translation="MIRISLAALFLAFLKVSLSSFGGGLVWARRVTVEQRRWLTEDEF
                     TDILSLCQFLPGPNVIGIAVCVGAKFRGLAGAISAACGFLLIPLIIGFPLGVLYLQFT
                     DISVFQNILRGVSAVASGLLIATGLRMLRPRRREPLSLIVAALAFCGMVFTKLPLIAV
                     LSGVTLLSVVATKIETPRRS"
     gene            741..1265
                     /locus_tag="VHX39_19685"
     CDS             741..1265
                     /locus_tag="VHX39_19685"
                     /inference="COORDINATES: protein motif:HMM:NF014471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEX3993402.1"
                     /translation="MSEVSATLALATHLALLSSISFGGFPTVLPDVRAFVVVTHGWMT
                     DQEFTAFFALAQAIPGPNMILMMGFVGWKVSGLPGAALSALATSLPACVIYFIAWRLW
                     HRFRHAPWQRVARAALVPVVAGLVVASGTVMAGTGWRANLVTIAAAAIMLRTRFNPLL
                     ILAAGGALGGLGLL"
     gene            complement(1383..1841)
                     /locus_tag="VHX39_19690"
     CDS             complement(1383..1841)
                     /locus_tag="VHX39_19690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993403.1"
                     /translation="MGFGRIAEQRVVAAMLSEVWMPHYRALLATSLEIAGQVGEAASL
                     LQEALDNAARTGERWFEAELNRHQGELMLRQGQSGRAEELFRGALRIAQDQRAKLWEL
                     RAAVSLARMWRDQGRHSDASAILAPVYGWFTEGLDTPDLKQAKALLDEGA"
     gene            1863..2003
                     /locus_tag="VHX39_19695"
     CDS             1863..2003
                     /locus_tag="VHX39_19695"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3993404.1"
                     /translation="MADGEMIVYDNTRLLHGRTDFQDPLRHLVRVRMHEREPAEALRL
                     AS"
     gene            2134..>2344
                     /locus_tag="VHX39_19700"
     CDS             2134..>2344
                     /locus_tag="VHX39_19700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993405.1"
                     /translation="MSALGVALCAEARQSAAAYGVLATALALGLVPTRKIWVARRSGK
                     VAILLASGAILGTLAVGGDLVRVLIA"
BASE COUNT          369 a          751 c          742 g          482 t
ORIGIN      
        1 cgagaggaca ttcttatgcc gcgttgacaa cgcgacacga atgccatcga ggatgcggcg
       61 accttgccgg aagttgggcg gatgttctgg tttatgacga cgtggggggc cgtgtttgcg
      121 actggggttg aatagggtga agcgcccgat gtgcgctgcg ctcgcaccgg ggtccgctgc
      181 tcctgcaacg ggacgaaatc gatgatccgg atttcactcg cggccttgtt cctcgcgttc
      241 ctcaaagtct cgctcagcag ttttggtggt gggctggtgt gggctcgccg cgtgacggtc
      301 gaacagcgcc gatggctcac agaggacgag ttcaccgaca tcctcagcct gtgtcagttc
      361 ctccccggcc cgaacgtcat cggcatcgcg gtctgtgtcg gggcgaagtt ccgaggcctg
      421 gcaggagcga tcagtgcggc ctgcgggttc ctcctgatcc cgctgattat cgggtttccg
      481 ctcggcgtgc tttatctgca attcaccgat atttctgtgt tccaaaacat tctccgcggc
      541 gtgtccgccg tcgcctccgg actgctgatc gcgaccggac tgaggatgct caggccacga
      601 cgtcgcgagc cgctctcact tatcgtcgcc gcgcttgcct tctgcggcat ggtgttcaca
      661 aaattgccgc tcatcgccgt gctctcgggc gtgacgttgc tgagcgttgt cgccaccaaa
      721 atcgaaaccc ctcgccggtc atgagcgaag tgtccgccac gctggcgctg gccacgcatc
      781 tggctttgct gtcgtcgatc agtttcggcg gtttccctac cgtcctgccg gacgtgcgcg
      841 cttttgtcgt ggtgacccac ggttggatga cggaccagga gttcaccgcg tttttcgctc
      901 tcgctcaggc cataccggga ccgaacatga tcctgatgat gggcttcgtc ggctggaaag
      961 tgtccgggct tcccggggcg gcgctgagcg cgcttgcgac ctctctgccg gcgtgtgtga
     1021 tttatttcat cgcctggcgt ttgtggcacc ggttccggca tgcgccatgg caacgcgtcg
     1081 cgcgcgccgc gttggtgccc gtggtcgctg ggctggtggt cgccagcggc acggtgatgg
     1141 cgggcaccgg gtggcgagcc aacctggtca ccatcgccgc cgccgcgatc atgctgcgca
     1201 cgcggttcaa tccgttgctg atattagctg ccggcggggc tctgggaggg cttggattat
     1261 tgtgacgccg aacgcaacaa tctcggccca gggcgcaggt ccgcgaggcg ggctcgtgca
     1321 cgggcgcaaa tcaaccagcc tttgcaacgg cgcctaaaca cccgtcgtcg tcgagagctg
     1381 gcttatgccc cttcgtcgag caacgccttc gcctgtttga ggtcaggcgt gtcgaggcct
     1441 tcagtaaacc aaccgtagac cggggcgaga atggcacttg catcggaatg gcggccctgg
     1501 tcgcgccaca tccgggcaag actgaccgcg gcacgcaatt cccaaagttt ggcccgctgg
     1561 tcctgagcga tccgcaaggc cccgcggaac agttcctcgg cgcgcccgga ctgcccttgt
     1621 cgtagcatga gttcgccctg gtgccggtta agctccgcct caaaccaacg ctcacctgtc
     1681 cgggccgcgt tgtccaaggc ctcttgcaac aacgaggcgg cctctcccac ctggccggcg
     1741 atctccaacg acgtcgccag aagggcgcga tagtgcggca tccacacctc tgatagcatc
     1801 gccgcaacta cgcgctgttc cgcgatgcgg ccgaagccca tgcgtcccgc accgagttcc
     1861 tgatggccga tggagagatg atcgtttacg acaacacgcg actattgcat ggccggaccg
     1921 attttcagga tccgctgcgt catctggtcc gggttcggat gcatgaacgc gaacccgccg
     1981 aagcgttgcg acttgcctcc tagcatcagg acaacagcca ggcgttacat tcccatcgac
     2041 ggcgccgccg acgcgatcgg agggccagcg gacctcccgg ccagcgccgc aggttcagca
     2101 ctccaaggat ttcccaccca cctcgtgttg ctgatgagtg ccctcggcgt ggcgctgtgc
     2161 gcggaagcgc gacagtcagc cgctgcgtac ggcgtgctgg caacggcttt ggctcttggt
     2221 ctcgtgccaa cccggaaaat ctgggtcgca cgtcgcagcg gcaaggtagc cattctcctc
     2281 gcgagtggcg caatcctcgg gacgctcgct gttggcggcg acctggtccg cgtactgatc
     2341 gcgg
//
LOCUS       DATAVD010001033         2054 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3074819, whole genome shotgun sequence.
ACCESSION   DATAVD010001033 DATAVD010000000
VERSION     DATAVD010001033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3074819"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..315)
                     /locus_tag="VHX39_19705"
     CDS             complement(<1..315)
                     /locus_tag="VHX39_19705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993406.1"
                     /translation="MASDAETLSTAVNANMPITERRGQQARRRRPIGIVVLGMHRSGT
                     SALTRIINLAGADLPTELLGATSDNPTGHWESEQVHDLHNAFMSDIGGRWDDWRQVSP
                     EWL"
     gene            complement(397..1539)
                     /gene="rffA"
                     /locus_tag="VHX39_19710"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
     CDS             complement(397..1539)
                     /gene="rffA"
                     /locus_tag="VHX39_19710"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /EC_number="2.6.1.59"
                     /inference="COORDINATES: protein motif:HMM:NF008687.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019180 -
                     dTDP-4-amino-4,6-dideoxygalactose transaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009246 - enterobacterial common antigen
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxygalactose transaminase"
                     /protein_id="HEX3993407.1"
                     /translation="MSIPFHQPKLSNTELSYVTECLNSGELAGDHRFTHRCHALLKET
                     YGNPVLLMHSCTAALEAAALLIGLVPGDEVIMPSFTFVSTANAAVLRGAIPVFVDIRP
                     DTLNIDETLIEAAITPRTRAIFPVHYAGVGADMPRIVELAAAHGLHVVEDAAQCFAAS
                     YADRALGSFGDLGCLSFHETKNIVSGEGGALIINNPEMIDRAYYIREKGTNRTQFMRG
                     EIPKYEWIDIGSSFLPSDILAALLLAQLERADELTTRRREVWDRYQLAFRSLEEEGLV
                     SQPRPTQEAAHNGHIYYLVGRDPMLTTAVLGRLKADGIAATRHYVPLHSAPAGRLFGR
                     TDHDLPVTDRVAATLIRLPLFSGISEQAVDRVIDRTLLHVRAAGAA"
BASE COUNT          397 a          618 c          671 g          368 t
ORIGIN      
        1 cagccactcg gggctgacct gccgccagtc atcccagcgt ccgccgatat cgctcatgaa
       61 tgcgttgtgc agatcgtgaa cctgctccga ttcccaatgg ccggtcgggt tgtcggaggt
      121 tgcgccgagc agttcagttg gcaaatcggc gccggcgagg ttgatgatcc gcgtcagggc
      181 cgaggtgccc gagcggtgca tgcctaacac gacgattccg attggacgcc gccgccgcgc
      241 ctgctggccg cgacgctccg tgattggcat gtttgcgttg accgcggtgc tcagcgtctc
      301 ggcgtcgctg gccattggtt ccgagcgatc ggaatcgggc atattggctt taatgaggtt
      361 gtggattagc gatagggcac gggccggcaa cgcgcgtcaa gccgcaccag cggcccgcac
      421 atgcagcaac gtgcggtcga tgaccctgtc caccgcctgt tccgaaattc cggaaaacag
      481 gggcaggcgg atcaacgtcg ccgccacccg atcggtcacc ggcagatcgt ggtcggtacg
      541 accaaacaaa cgcccggccg gggcggaatg aagcggcaca taatgccgag tggcggcgat
      601 cccatccgcc ttcaaccgtc caagcacggc tgttgtaagc atcgggtcgc gcccgaccaa
      661 ataatagatg tgcccattat gggctgcttc ctgggtgggc cgcggctgcg acaccaggcc
      721 ctcctcctca agagaccgga acgccagttg ataacggtcc cagacctccc ggcgacgcgt
      781 ggtcagctca tcggcgcgct ccaactgcgc gagcagcagt gcggccaaaa tatcgctcgg
      841 cagaaaggag gagccgatgt cgatccactc gtatttcggg atctcgccac gcatgaactg
      901 ggtacggttg gtaccttttt cgcgaatgta gtaagcgcgg tcgatcatct ccgggttgtt
      961 gatgataagg gcgccgccct cgccggagac gatattcttc gtttcatgaa agctcaggca
     1021 gccgaggtcg ccaaaactgc cgagcgcccg gtccgcgtac gaggcagcaa agcactgcgc
     1081 ggcgtcctca acgacatgga gcccatgagc ggcggccagc tcgacgatac gcggcatgtc
     1141 ggctccgacc ccggcatagt gaacggggaa gatcgcgcgg gtgcgcgggg tgatcgccgc
     1201 ctcgatcaac gtttcatcga tgttgagcgt gtcgggccgg atgtcgacaa agactggtat
     1261 tgcgccgcgc aggaccgcgg cattggcggt cgagacgaag gtgaatgacg gcataatgac
     1321 ctcatcgcca gggacaaggc caatcagcag cgcggcggct tccagagccg ccgtgcacga
     1381 atgcatcagt aagaccggat tgccataggt ttccttgaga agggcatggc agcggtgagt
     1441 aaacctgtga tctccggcca gctctccact atttaagcac tcggtaacgt aactcaactc
     1501 ggtattcgat agcttcggct gatggaaggg gatgctcatc cgtggcacaa gattccatgg
     1561 gacgcggacc agcacgagcc tgaaatgcca ccgcgcatca gatgctgccg ctacgatggg
     1621 cccatcttac ttgcgcgttg ttcggtccac aatcggaatt tccgccagat ttccgcgacc
     1681 aaggcgcaca attgccgccc gactcgcacc ctaaaccgct tagcggcact gcgcgcgcgt
     1741 cgtgccggtg tggcccggcc ggatgatcgg ttcaaggcgc tcggtcgacg ccctcgacac
     1801 aaacgcgcgg gcgcggggcc gtcgagccga ccggctttat cctatcggtg gacggtgagt
     1861 cgcgattcaa tcgctggatg aacagcgtac cgaaagcgac cccgatggtg ttaacgggag
     1921 aggagcgggc cgagcttgag ggcttggcgc gctcgaccaa gagggagtac cggctgcggc
     1981 agcgcgcgcg gatcgtgctg tcggcggctg cggggaaggc gacgcgtgcg attgcgcggg
     2041 aggttggctg tacg
//
LOCUS       DATAVD010001034         2755 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3074996, whole genome shotgun sequence.
ACCESSION   DATAVD010001034 DATAVD010000000
VERSION     DATAVD010001034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2755
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3074996"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..160)
                     /locus_tag="VHX39_19715"
     CDS             complement(<1..160)
                     /locus_tag="VHX39_19715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006939175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993408.1"
                     /translation="MGRNRRLKGRQFTASVILWAVRWYLMFPISYRDLELMLLDRGVT
                     VDHSTIFRW"
     gene            complement(420..495)
                     /locus_tag="VHX39_19720"
     tRNA            complement(420..495)
                     /locus_tag="VHX39_19720"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(460..462),aa:Ala,seq:ggc)
     gene            648..1712
                     /locus_tag="VHX39_19725"
     CDS             648..1712
                     /locus_tag="VHX39_19725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase"
                     /protein_id="HEX3993409.1"
                     /translation="MRAWAVVENGKPLQELELPTPEPKGTEVLVEVTHCGVCHSDLHI
                     WEGYYDVGGGKKMSLADRGVTLPLAMGHEIVGRVAKLGPDAKGVKVGDIRIVYPWLGC
                     GTCETCLAEEDNMCIRAARSLGVYANGGYGTHVIAPHPRHLIDPGKVDPAVAATYACS
                     GITVYSAIRKAMPVPQDEAIVLVGAGGLGLNAIKVLLALKHRNIISVDISPEKRETAL
                     KAGAHKVVDGNGPDVAQRITEAAGGPVLAVIDLVNGTQTARFAFGALRKGGKLIQVGL
                     FGGELMLPLPIMAIRALTVQGSYVGNPKELRELIKLAQEGSLEALPVDTVPQRDADAA
                     LMRLRDGKVTGRLILKAEAA"
     gene            1712..2734
                     /locus_tag="VHX39_19730"
     CDS             1712..2734
                     /locus_tag="VHX39_19730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HEX3993410.1"
                     /translation="MPANTATRRSVVLKRRPRGEPEATDFEVTEDEIPPPGPGEVVTR
                     TIWLSIDPYMRGRLREEQTYAVAIQIGEVMTGETVGEVIASDHPGFAVGDIAVGARGW
                     QTHNISHGDRLVKIERNAAPLSAYLGVLGMPGATAYAGVTEILKPKAGETIVVSAASG
                     AVGSIAGQLAKRAGARVVGIAGGPDKCLWVQDSLGFDACVDHRSLDLRAELLAECPDG
                     IDGYFENVGGEVQAAVFEQLNPFSRVAMCGMVSQYNERVFPPGPNLGFVVGKRVLIQG
                     FIVSDRPERLTEWRMLAAPLVADGGLIYREDVHDGLDNAPSALAAILTGQNFGKLLVR
                     VGPDPI"
BASE COUNT          523 a          854 c          892 g          486 t
ORIGIN      
        1 tccatcgaaa gatggtactg tggtcgaccg tcacaccacg atccagcagc atcagttcca
       61 ggtcgcggta gctgatcgga aacatcaaat accagcgcac cgcccagagg atcaccgagg
      121 cggtgaactg ccgtcccttg agccgccggt tccgacccat cgccgccctg catcccactg
      181 gcccagcatc atcttaccga acccaggcca gcccccaaac tttgcaacag agccttctga
      241 tctgcgtagc gccccatagc gggcggattt gaaccaccga ccaagggatt tcccgtgtcg
      301 tcggtgatac gagcggccgc cgtcgatatg atcgctgaaa aactggcaat aatttgcgga
      361 catactgcgg acagtttcca acggaatatc ggtcatcgcc tcataagtta ttgaacccat
      421 ggtggagccg aggggaatcg aacccctgac ctcctgaatg ccattcaggc gctctcccaa
      481 ctgagctacg gccccggcaa gggagcgggt cctataacca ggccaccgga ccatcgcaag
      541 accgggcgca agaccgggcg caagaccggc gtgcatgaat gccgccccac cgcttgaccg
      601 ctctcgcccg cgcgctatcc atccccaaac acacaggaga ccccaccatg cgcgcctggg
      661 ccgtcgtcga gaacggaaag ccgctacagg aactcgaact ccccacgccc gagcccaagg
      721 gcaccgaggt gttggtcgaa gtcacccatt gcggcgtctg ccactccgat ctgcacatct
      781 gggagggtta ttacgacgtc ggcggcggga aaaagatgtc tctggccgat cgcggggtga
      841 cgttgccgct tgccatgggg cacgagatcg tcggccgcgt cgccaaattg ggcccggacg
      901 cgaagggcgt gaaggtcggc gatatccgta tcgtctatcc ctggcttggc tgcggcacct
      961 gcgagacctg cctcgccgag gaagacaaca tgtgcatccg agccgcccgc agcctcggcg
     1021 tctacgccaa cggcggctac ggcacccatg ttatcgcccc gcacccacgg catctgattg
     1081 atcccggaaa ggtcgatccg gcggtcgcgg cgacctacgc gtgttccggc atcacggttt
     1141 attccgccat cagaaaagcc atgccggtcc cccaggacga ggcgatcgtg ctggtgggcg
     1201 ccggaggcct cgggttgaac gccatcaagg tgctgctggc gctgaagcat cggaacatca
     1261 tctcggtcga tatcagcccg gagaagcggg agaccgcact gaaggcgggc gcccataagg
     1321 tggtcgacgg caatggcccg gacgtggcgc aacgtatcac cgaggcagcg ggtggtccgg
     1381 ttctcgcggt gatagacctc gtgaacggca cccagactgc gcggtttgcg tttggcgcgc
     1441 tgcgcaaagg cggaaaattg atccaggtcg gcctgttcgg cggcgaactg atgctgccgc
     1501 tgccgatcat ggcgatccgc gctctgaccg tgcaggggtc ctatgtcggc aaccccaaag
     1561 aactgcggga gttgatcaaa ctggcgcagg agggctcgct ggaagcgctt ccggtggaca
     1621 cggtgccgca acgcgacgcc gatgctgcgc tgatgcggtt gcgcgacggc aaagtcaccg
     1681 gccgtttgat cctgaaagcg gaggcagcgt gatgccagcg aacaccgcca ctcgacgatc
     1741 cgtggtcctg aagcgccggc cgcgcggcga gcccgaagcg accgacttcg aggtcacgga
     1801 agacgaaatc ccgcccccag gcccagggga ggttgtgacg cgaacgatat ggctttcgat
     1861 tgacccgtat atgcggggtc ggctgcgtga ggagcagacc tacgccgtcg cgatccagat
     1921 cggcgaggtc atgaccggcg agaccgtggg cgaggtcatc gcctcggacc atcccggatt
     1981 tgcggtgggc gatatcgcgg tcggtgcgag ggggtggcag acgcacaaca tctcgcacgg
     2041 cgatcgtctg gtgaagatcg aacgcaatgc tgcgccactt tcggcctatc tcggtgtgtt
     2101 gggcatgccg ggtgccacag cttatgctgg cgtgacggaa atcctgaagc cgaaagccgg
     2161 agagaccata gttgtttcgg ccgcatccgg agcggtgggc tcgatcgccg gccagcttgc
     2221 caaacgcgcc ggcgcgcggg tggtgggaat cgccggcggg ccggacaagt gcctgtgggt
     2281 gcaggacagt ctcggcttcg atgcctgtgt cgaccaccgc tcgctcgatt tgcgtgccga
     2341 actgctcgct gagtgcccgg acggcatcga cggctatttt gagaatgtcg gcggcgaggt
     2401 gcaggcggcg gttttcgagc aactcaatcc gttctctcgg gtggcgatgt gcggaatggt
     2461 ctcgcaatac aacgagcgtg tgttcccgcc tggtcccaac ctcggttttg tggtcggcaa
     2521 acgggtgctc atccagggct tcatcgtgtc cgaccggccg gagcgattga ccgaatggcg
     2581 catgctcgcc gcaccgctgg tcgccgatgg cggcctgatc taccgcgagg atgtgcatga
     2641 cgggttggac aatgccccga gtgcgctggc tgccattctg accggccaga attttggcaa
     2701 attgttggtg cgggtcggtc ctgatccgat ctgagccttg gagcgtgacg gcctg
//
LOCUS       DATAVD010001035         4904 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1773511, whole genome shotgun sequence.
ACCESSION   DATAVD010001035 DATAVD010000000
VERSION     DATAVD010001035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4904
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1773511"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..569)
                     /locus_tag="VHX39_19735"
     CDS             complement(<1..569)
                     /locus_tag="VHX39_19735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993411.1"
                     /translation="MGMTTAPPILQLLLAVALGFFLGLAFEEFHARSNERRPGGIRTF
                     PLLTLVGALLFQLDPTHFIPFSVGLLALGAWLTCFYWQHLRETDAEGFPNVGLMVPTC
                     NVLAYLLGPVALTQPPWAAIGATVAGVLFLTSRAGLHDLARRIELSEIVNAGRFLLLT
                     GFALPLLPNTPVTELTSITPRQVWLAMVAV"
     gene            646..909
                     /locus_tag="VHX39_19740"
     CDS             646..909
                     /locus_tag="VHX39_19740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993412.1"
                     /translation="MADDAAGQGSELLERLRDLGHHTEADHLERHLPLQTAERGLLFA
                     LREVCETILTAIEAIDPVTQTMIEELRLEVEKHLRLHEKGKTS"
     gene            1010..1834
                     /locus_tag="VHX39_19745"
     CDS             1010..1834
                     /locus_tag="VHX39_19745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX3993413.1"
                     /translation="MKSSHWKIADLAWDRFEPDKLDPETLKVIKAAALVEFGGGKYGH
                     YLCNIFADDPLFQQAARNWANEEVQHGEALGRYAELADPAFSLATAYARFESGYGFDI
                     NAVESVRGSRSGELIARCVVETGTSSYYTAIADATEEPVLKQICRHIAADELRHYKLF
                     YTHLKRYLGREELSRFERMRIVLGRMRESEDDELAYAYYAANAPADAIYRREKYARSY
                     MMRAYRFYQPVHMDRVVAMAFKICGLRPHSVWHGMASRAAWWAVNRRVQAAAKAAA"
     gene            2016..2627
                     /locus_tag="VHX39_19750"
     CDS             2016..2627
                     /locus_tag="VHX39_19750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX3993414.1"
                     /translation="MSRCNSALSVSRRFFLRGTGAAAGGVALLNNMQSAAAATDEPPI
                     LGPDAVPVTLTVNGRNYNLNLEPCCTLAEVLRGPLDLTGTKIGCDRGACSACTVWLDG
                     APAASCMLLAVDVGSRAVTTIEGLAQGDTLHPVQEAFIAHDAMQCGYCTPGMVMSCAA
                     LLEHKPDPTAEDVQTAISGHLCRCGTYPHVVEAVLAVAASRKT"
     gene            2631..>4904
                     /locus_tag="VHX39_19755"
     CDS             2631..>4904
                     /locus_tag="VHX39_19755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3993415.1"
                     /translation="MTGAATHPEKFPFGIAGAGLSEIERQVPDDEPPPLPVNEALQVI
                     GKPVPRHDGRAKVTGAARFTVDVKLPDMLHARILRSALPNARVRSVDTVAASRLPGVR
                     AILVIAPKDSVLRYAGAPIAAVAAATPAAAEAAVRLIRVDAAPLPFVVDMDIARRANA
                     ALVYQPGEALPLNAVEIAVSAALPLTGNVRGPETLGSRGNVEQGFGQSEVVVESEYRT
                     HTQTHCCMEPHSIVSDWRDDGLTVWMSTQFTAGVRRELARVFDLKLSQVRVKVAAMGG
                     GFGSKSQLGTYGQVAVMLSRQAGAPVRLVLDREEEHLDTGNRPETWQHLKIGARRDGT
                     LSAISLLEYGSAGVGVGAGVGNVFQSMYACPNVSLSQNDVFINAGRGSAMRGPGNTPG
                     AFALEQAIDELAGQLGLDPLALRDRIDPSQVRREERRIGAARIGWDRRHPPGADSGTI
                     KHGMGMAQSLWGANVSTNASCEVRVLRDGSVLVLSSVQDLGTGIGTILAQVVAEELGL
                     RPEDITVHIGDTAFPSGPPSYGSQTTASITPAARAAAWTVKQALFREVAGALGTTPHR
                     LVARDGKILIAGDPARSMSFREATGGLRTDQLSAVQSRADDYGGFRRHVGDAASAQND
                     LGGVQFADVSVDTETGVIRVQRVVAVQDCGRPINPKLIESQVQGGVLMGISYALLEQR
                     VMDQHTGRMLNANLEQYKLVGPCDTPLIDVHVLENYLGQSATDAYGIAEPSNIATAPA
                     IANDVFNAIGVRVRELPM"
BASE COUNT          946 a         1409 c         1616 g          933 t
ORIGIN      
        1 accgcgacca tcgccagcca gacctgacgc ggggtgatac tcgtcagctc cgtcactggc
       61 gtatttggca acagcggcag ggcgaacccc gtcagcagca ggaatcggcc ggcgttgacg
      121 atctcactta gttcaatgcg acgggcaagg tcgtgcagcc ccgcgcgcga ggtcaagaac
      181 agcacaccgg ccacagttgc cccgatggcg gcccagggtg gctgggtgag cgccactggg
      241 cctagcagat aggcgaggac gttacaggtc ggcaccatca ggccgacatt gggaaagcct
      301 tccgcgtcgg tctcgcgaag gtgttgccaa taaaagcagg tcagccacgc ccccaatgcc
      361 agcagcccga cgctgaatgg gatgaaatgc gtggggtcca actgaaagag cagcgcgccc
      421 accagagtca gcagcgggaa ggtccgaatg ccgccaggcc gccgctcgtt cgagcgggcg
      481 tgaaactcct cgaaggcaag ccccaaaaag aacccgaggg cgaccgccag tagcaattgc
      541 aggatgggag gcgccgttgt catgcccatg tgctacacca tgcgccgtgg tgccggacag
      601 ccaggaggcc gtaccgttgg accgcagtcc tggacggagg aagtcatggc tgatgacgca
      661 gcggggcagg gcagtgaact gctcgagcgg ttacgggatc tgggccacca cacggaggcg
      721 gatcacctcg agcgccattt gccgctgcaa accgcggagc gtggcttgct gtttgccctc
      781 cgtgaggtct gtgaaacgat cctgacggcc atcgaggcga tcgatccggt cacccaaaca
      841 atgatcgagg aattgcgttt ggaggttgaa aagcacctcc ggttgcacga gaaggggaag
      901 accagctaaa acggttgtgt tttgcggcgc accggcgaag acgggtgcca cggctgggtt
      961 ggatgagcgc cttgtcgatc aacgggacag actggcgaat gaggacctca tgaaatccag
     1021 tcattggaag attgccgacc tggcgtggga ccggtttgaa cccgacaaac ttgatccgga
     1081 aacgttgaag gtgatcaaag ctgccgcgct ggtcgaattt ggcggcggca aatatggcca
     1141 ttacttgtgc aacatctttg ccgatgatcc gctgtttcag caagctgcca gaaattgggc
     1201 gaacgaagaa gttcagcatg gtgaagcgct gggacgttac gccgaactcg ccgatccggc
     1261 gttcagtttg gccaccgcgt acgcccggtt cgaatcgggg tacggctttg acatcaatgc
     1321 tgtggagtcg gttcgtggat ctcgctccgg cgagttgatt gcgcgttgtg ttgtcgaaac
     1381 cggcaccagc tcgtactaca ccgcgattgc cgatgcgact gaggagccgg tattgaagca
     1441 aatatgccgg catatcgctg ccgatgaatt acgccattat aaattattct acacacattt
     1501 gaaacggtat ttaggtcgcg aggaattgag ccggttcgag cgtatgcgca tcgtactcgg
     1561 tcgcatgcgg gaatccgagg acgatgaact ggcctatgct tattacgctg ccaatgctcc
     1621 ggcggacgcg atttatcgac gcgagaaata tgccaggtcc tacatgatgc gggcctatcg
     1681 gttctatcag ccggtgcaca tggatcgcgt tgttgccatg gccttcaaga tctgtggcct
     1741 gcggccgcat tcggtttggc atggcatggc aagccgtgcg gcatggtggg cagtcaaccg
     1801 gcgcgttcag gctgcggcaa aagcggcggc ctgatcctgg ggttaccggc gcaggtcgcg
     1861 ccggacgtgg cggtgcgcag gcaaccagcg ccaatcgacc cgaaatatcg cgcaaatggc
     1921 gcgcgcaatt tcgtttgacc tgggtcaagg cgccgctatc gctgcttcct taagaactct
     1981 tccctgcaac ccagtttctg ggtcgggagc agcaaatgtc tcgttgcaac agtgcacttt
     2041 ccgtatcacg ccggttcttc ctgcgaggca caggtgctgc ggccggcggt gtcgcgttgc
     2101 tcaacaacat gcaatctgct gccgccgcca ccgacgagcc gccaatactg ggccccgacg
     2161 cggtgccggt cacgctgacg gttaatggcc gaaattataa tctgaacctg gaaccgtgct
     2221 gcacacttgc cgaggtgctg cgcggtccac tcgatctgac gggcaccaag atcggctgtg
     2281 accgaggtgc ctgttccgcc tgcacggttt ggctcgacgg tgcgccggcc gcatcatgca
     2341 tgttgctcgc ggtcgacgtc ggctctcgcg cggtgaccac catcgaaggt ttggcacaag
     2401 gcgacacgct ccatccggtg caggaagcgt tcatcgcgca cgacgcgatg cagtgcggtt
     2461 attgcacgcc cggcatggtt atgagctgcg ccgcattgct ggaacacaag cccgatccga
     2521 ccgcggagga cgtacaaacc gcgatcagcg ggcatttatg ccgttgcggc acctatcctc
     2581 acgtcgtgga agccgtgctg gccgtcgccg cgtcacgaaa gacctgatgc atgaccggtg
     2641 ccgccacaca tcctgaaaaa tttccgttcg gtatcgccgg tgccggttta agtgagatcg
     2701 agcgtcaggt tcccgacgac gaaccgccgc cgctgccggt gaacgaagcc ctgcaggtca
     2761 tcggcaagcc ggtaccccgg cacgacgggc gcgccaaggt caccggtgcg gcgcggttca
     2821 cggtcgatgt gaaactgccg gacatgttgc atgcacgcat ccttcgctcg gcattgccga
     2881 atgcgcgggt gcgatcggtc gatacggttg ccgcttctcg cctcccaggc gtgcgtgcca
     2941 tactggtaat tgcaccaaaa gactccgttt tgcgttatgc aggagcgccg atagcggcgg
     3001 tcgcggcggc cactccagcg gccgcagagg ctgccgtgcg cctgattcgt gtcgacgcgg
     3061 cgccgttgcc gttcgtggtc gatatggaca ttgcgcgacg ggccaacgca gctttggttt
     3121 accagcccgg cgaggcatta ccactcaacg cagtggaaat tgccgtgtcg gccgccctgc
     3181 cgctgactgg caatgtgcgc gggccggaaa cactgggcag tcgcggcaac gttgaacaag
     3241 gtttcggcca gtcggaagtg gtggtggaga gcgaatatcg cacgcacact cagacgcatt
     3301 gctgcatgga gccgcactcg atcgtttcgg attggcggga tgacgggttg acggtctgga
     3361 tgtccaccca gttcaccgcc ggggtccgcc gtgaactggc gcgggtgttc gatctgaagc
     3421 tgagccaggt gcgggtcaag gtcgcggcga tgggcggcgg cttcggttca aaatcgcagc
     3481 tcgggaccta cgggcaggtc gcggtgatgc tgtcgcgcca ggctggtgcg ccggtgcggc
     3541 tggtgctgga tcgcgaggaa gagcatctcg acaccggcaa ccgcccggag acctggcaac
     3601 acctgaaaat cggcgctcgc cgggatggca cgttgagcgc gatttcgttg ctcgagtatg
     3661 gttcggcagg tgtcggcgtc ggcgccggtg tcggcaatgt cttccagtcg atgtatgcct
     3721 gcccgaatgt ttcgttgtcg caaaatgacg tatttatcaa tgccggtcgt ggctcggcga
     3781 tgcgtggacc gggcaatacg ccgggtgcct tcgcgttgga acaggcgatc gacgaactgg
     3841 ccggccagct tgggctcgat ccgctggcgt tgcgtgaccg gatcgatccg agccaggtgc
     3901 ggcgtgagga gcgccgtatt ggtgcggcaa gaatcggttg ggatcggcgc catccaccgg
     3961 gtgccgatag cggaacgatc aaacacggaa tgggcatggc gcaatcgctc tggggcgcca
     4021 atgtgtccac caatgcatcg tgcgaggtgc gggtgttgcg cgacggttcc gtgctggtgt
     4081 tgtcgagcgt gcaggattta ggcactggca tcggaacgat cctggcccag gtggtggcgg
     4141 aagaattggg tttgcggcca gaggatatca cggtgcacat cggcgacacc gcgtttccct
     4201 ctgggccgcc atcgtacggc agtcagacca ctgcctcgat cacacccgcg gcacgcgctg
     4261 cggcatggac ggtgaagcag gcattgtttc gagaggtcgc cggagcgctt ggcaccacgc
     4321 cgcaccggtt ggtggcacgt gacggcaaga tcctcattgc cggcgatcct gcgcgcagca
     4381 tgagctttcg cgaggcaacc ggcggcttgc ggacggatca actcagcgcg gtgcaatcgc
     4441 gggccgatga ttatggtggc tttcgccgcc atgtcggcga tgccgccagc gcacagaacg
     4501 acctcggtgg tgtgcaattc gcagacgttt cggtcgatac cgagaccggc gtcatccgcg
     4561 tgcagcgcgt ggtggcggtg caggattgcg gccggccaat caacccgaag ctgatcgaaa
     4621 gtcaggtgca aggtggggtg ttgatgggca tctcgtacgc attgctcgag caacgcgtca
     4681 tggatcagca caccggacgc atgctgaatg ccaatttgga acaatacaaa ctggttggac
     4741 cgtgtgacac gccgctgatc gatgtgcacg tgttggaaaa ctacctgggc cagagtgcga
     4801 ctgacgccta tggcattgcc gagccgtcca acattgccac cgcgccggcg attgccaacg
     4861 acgtattcaa tgcgatcggc gtacgggtgc gcgaattgcc gatg
//
LOCUS       DATAVD010001036         1894 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1028493, whole genome shotgun sequence.
ACCESSION   DATAVD010001036 DATAVD010000000
VERSION     DATAVD010001036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1894
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1028493"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..220
                     /locus_tag="VHX39_19760"
     CDS             <1..220
                     /locus_tag="VHX39_19760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993416.1"
                     /translation="LWHQVRSSARSAQVQAALPTYRTLNSGRPPQADGAHRDPAIKLV
                     EVTPAIIINLTHLNIRLVNFIYVIGSSN"
     gene            518..1213
                     /locus_tag="VHX39_19765"
     CDS             518..1213
                     /locus_tag="VHX39_19765"
                     /inference="COORDINATES: protein motif:HMM:NF012455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin"
                     /protein_id="HEX3993417.1"
                     /translation="MNGLTKAIAAEFIGTFALIYLGAGTVAALGGAQVPAIAFAHGLT
                     IMVFASAFGDISGGHINPAVTIGLAVAKVFPRRHVAPYVVAQVAGAVAAGYCLLAVFG
                     GPVNHLGATLVDTQRITLGGAFVLEAIGTFFLVNTVLHAAVRGSAGRLAPFAIGMTVT
                     VCILMFGDLTGGSVNPARTIGPAVATGTFDGVGVYLGAQLIGGMMAGILYRVFWVPQS
                     VSAPPGARHAPAE"
     gene            complement(1376..>1894)
                     /locus_tag="VHX39_19770"
     CDS             complement(1376..>1894)
                     /locus_tag="VHX39_19770"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3993418.1"
                     /translation="DILHNNVGIGSPGTAETVDLGEWERVFEVNLTAALLCCRACIPR
                     MRAAGGGSIINVSSTAGAVGLQGATGAVAYVATKAGLQGMTLSLAADFAAEGIRANCL
                     IVGTVATPMVAHLGEAGRERRRLAVPLQTEGTGWDVAWAAVYLASDEARWVTGVMLPI
                     DGGFLAIRAWPR"
BASE COUNT          353 a          641 c          539 g          361 t
ORIGIN      
        1 actgtggcac caagttcgat caagcgctcg cagtgcacag gtccaagcgg cgcttcccac
       61 ctatcgcacg cttaattctg gacgtccacc gcaagccgac ggcgcgcatc gcgatccagc
      121 catcaaattg gttgaggtga cacctgctat cataattaat ttgacgcatc tgaacatacg
      181 acttgtgaat tttatttacg tgattggcag ctccaattga ttgttcgttc ccttcgtgga
      241 gcggatcgtc cgcatcatgg atagtccagc ggcgcaggca tggcttctgg cagttctgac
      301 cacagcacaa caggggtttg tcatgagcag aaatcgcggc gtcatctaac gctgggccgc
      361 atggcttgtt ggcaaaggcg atctgaccgg ttcgagtgag tgcagacgcc gcgaaggccg
      421 gcatcacggc gtcacggatg taaagcgcac acaccgttgg acatacgagc caatggacga
      481 tgaaacatcg tgtgcaaagc gatgaaagga ttcgagaatg aacgggttaa cgaaagcaat
      541 cgccgccgaa ttcatcggca ccttcgcatt gatttacctg ggggccggca cagtggcagc
      601 cctcgggggc gcccaggtgc cggcgatcgc attcgcgcac ggactcacca tcatggtgtt
      661 tgccagtgcg ttcggcgata tcagcggcgg ccacatcaat ccggctgtca caatcggcct
      721 cgccgtcgcc aaggtgtttc cgcgacggca tgtcgcgcct tacgtcgtcg cacaggtcgc
      781 aggcgctgtc gcggcgggct attgcctgct ggctgtgttc ggcggcccgg taaaccatct
      841 cggcgcaacg ctcgtcgata cgcagcggat cacattgggt ggcgcgttcg tgctcgaggc
      901 gatcggcacc ttcttcctgg tcaatacggt cctgcacgct gcggtgcgcg gctcggccgg
      961 tcggctcgcc ccgttcgcca ttggcatgac ggtgaccgtg tgtattctca tgttcggcga
     1021 cctgaccggc ggcagcgtca atccagcgcg caccattggc ccggcggttg cgacaggcac
     1081 gtttgacggc gtcggagtct acctcggcgc acaactgata ggcggcatga tggcgggcat
     1141 cctctatcgc gtgttttggg tgccgcaatc cgtttccgca ccgcctgggg cccgtcacgc
     1201 gccggccgag taggcctgcg gacgatcctc tttttacatt cggtctcaac cctgccgttc
     1261 cgcggtcggc atgacccggc cttgagtcga atgtccgata tagacacttc ctggccagca
     1321 agcggaccgt cgcaaatcca cccactgcgg acacaatgct gcttcaccac cctcatcacc
     1381 tcggccatgc cctgatcgcc agaaacccgc catcgatcgg cagcatcacc ccggtcaccc
     1441 accgcgcctc atcgctcgcc aggtagacgg cagcccaggc aacatcccag ccggtacctt
     1501 cggtttgcag agggacagcg aggcggcgcc gctcacgccc cgcctcaccc agatgcgcca
     1561 ccatcggcgt cgccaccgtg cccacgatca ggcaattcgc ccgaatcccc tcggcagcaa
     1621 aatccgctgc cagagacagc gtcatcccct gcaaccccgc tttcgttgcc acataggcga
     1681 ccgcgcccgt cgcgccctgc aacccgaccg cgcccgccgt cgaggacacg ttgatgatcg
     1741 aacccccgcc cgccgcgcgc atccgcggaa tacacgcccg gcagcacaac aaagccgcgg
     1801 tcaggttgac ctcgaacacc cgctcccact cccccagatc cactgtctcc gccgttcctg
     1861 ggctgccgat gccgacgttg ttgtgcagga tgtc
//
LOCUS       DATAVD010001037         6361 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_658482, whole genome shotgun sequence.
ACCESSION   DATAVD010001037 DATAVD010000000
VERSION     DATAVD010001037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6361
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_658482"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1079
                     /locus_tag="VHX39_19775"
     CDS             <1..1079
                     /locus_tag="VHX39_19775"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HEX3993419.1"
                     /translation="YTFEAISAIVDIRRRPVKLTLVSWSLFIMFLPHLIAGPIVRLRQ
                     LMPQIEQKRTFLCRNLQIGMHLFAIGFAKKLAADPLGRIVDPVWSAPAQASSIALLLA
                     LLGFSAQLYLDFSGYTDMGRGVARMLGFRLPINFRAPFFARTPGEFYQRWHVSLSNWI
                     RIFVYDTLAITVFRRVRGRHRQNRALFAVILLVMAIFGLWHGSAWHFVMFGVVQGLVI
                     AGWAAVTKGKAPRTRFGQIASLLILQASWLFSLVLFRAGSMAEAGQFLFGLVDGRRWF
                     SDGLTWCLAAMLAAILLQAVEYYVRRRPLARVLCWLRGSTAGALLVLLGFAGTFAIKL
                     TVDAHSIAATGGAPAAASFIYFRF"
     gene            1128..2528
                     /locus_tag="VHX39_19780"
     CDS             1128..2528
                     /locus_tag="VHX39_19780"
                     /inference="COORDINATES: protein motif:HMM:NF013722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HEX3993420.1"
                     /translation="MPPVHRRFDLNGQTAFADLSGDHNPMHLDLQAARRLLLGGVAVH
                     GIHLLLWALDSVVATGTTWQALDSVRAHFDRPALLGEDIALQWQTSDEQVTVTAHNAV
                     GRVMRLKFNARSVPDRPVWDGLRIQPPLVCQEQRMAGLATMSGHLDLVLPESFATLFP
                     HLHAAFSPLQAAILLASTRLVGMICPGRHSLFSGLALQFAPTAATAGALEYAVSRADE
                     RVRMVDITLSGSGCCGTLETFLRPEPVAQLSFAALRDAVPRGSFTGQRALVIGGARGL
                     GELTAKLLAIGGADVSITYLNGADDAAAIVTDGSAAGCSLQTLHFDVAAPPGDVAGPD
                     GGFTHAYYFATPRIVTGPPVGFAAELLARYLEYYVTGLARSVAWLQSRSVADLRVWYP
                     SSVFVEQAPPGFAEYATAKACGEALCAQMTTRMSPMQVIADRLPRLATDQTQSLTTQT
                     LEDSVAILRSILLRLA"
     gene            2918..3616
                     /locus_tag="VHX39_19785"
     CDS             2918..3616
                     /locus_tag="VHX39_19785"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3993421.1"
                     /translation="MKLTVVIPCYNELKTLDEILAAVHQSPYADKEIIVVDDCSVDGT
                     REKLQTEIEPSGRVGRVIYHDQNQGKGAALRTGFKHATGDIVIIQDADLEYDPNEYPL
                     LLEPIISGKADVVFGSRFVGSHAHRVLYFWHRVGNSFLTLLSNMFTDLDLTDMETGYK
                     AFRREIIQSIDIEESRFGFEPEITAKIARRPGIRVYEVGISYYGRTYDQGKKIGWKDG
                     MRAIYCIIKYNLFR"
     gene            3613..4002
                     /locus_tag="VHX39_19790"
     CDS             3613..4002
                     /locus_tag="VHX39_19790"
                     /inference="COORDINATES: protein motif:HMM:NF016060.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HEX3993422.1"
                     /translation="MKVVKYFFVGGIAAVVDIGVFYLGAGVVGWNYLIVGAVSFTLAT
                     VVNYVISIRVVFQSGVRFARHHELILVFLVSGAGLAINQLILYACISRLLLAILPAKL
                     VATAGVFLWNYFIRSRFVFADPSKALS"
     gene            3999..6158
                     /locus_tag="VHX39_19795"
     CDS             3999..6158
                     /locus_tag="VHX39_19795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993423.1"
                     /translation="MIHGAVTPRLSGIPDLARNWMVTLLLASVGLIFVVGPSVLNGGI
                     PGDLGDARFNSYLLEHFFRWITRQDSSFWSADFFYPAPLTIAFSDNFLGDAFVYALLR
                     AVGFAREDAFRLWYVAGFVINFGVANYVLVRLGSSRLAAALGAFLFAFGLPVTAQEDH
                     VQLVYRFGVPLAVLALEEFRSRRELRQLTLCAFWTTWQLYCSIYTGYFLTLVLLAFIL
                     GHILCHTGGPISAIRSVLTVARVLWIRTTAPAKAAFLLSMAVLAAAIVLLCLPYFEVS
                     RLYGFKRSWSEISEMLPRPTSYLLANNSRFWPNYGPLFDRLPMRQEHAMFIGIAPFMA
                     VVIAVALRLTARVRWDRLFVPTMLAIVLLMLLTLSVDGHSAYRVLARLPGANAIRAVT
                     RIITILLFPWGMLLASSLDTITAARLPAWARSGMVALIGGLVVFEASYITHYMLTEQE
                     WQARMAAVAAELPPVIPQAPILLLAPKPGEQNLWPRELDAMLFAQNHGWRTLNGYSGN
                     TPPEYGTISDCQDAARALVTGIWFRDRYSGQSEQRYDALASQVVMAGYPHCDAAALPR
                     HPRATVFGGAIQAGVMANVTLRIDSLTVQDGQVGVVVSVVNASSATLPAISATAMPIR
                     LSTRFIDTQTVPPDLEHGAGWDSRQDIPFDIPAGTSQQIAFHIAAPKEPGSYRVAVSM
                     VQDGVAWFHDHGLHIPVSAETIIVNGEHIAHVSDGGR"
BASE COUNT         1095 a         1853 c         1934 g         1479 t
ORIGIN      
        1 tttacacgtt tgaagctatc agcgcgattg tcgacatcag acgacggccg gtcaaactga
       61 cactggtgag ctggagcctg tttatcatgt tcctcccgca tctgatcgcg ggaccgattg
      121 tgcgactccg ccaattgatg ccgcaaattg agcagaaaag aacattcctg tgtcgtaatc
      181 tacagatcgg catgcatttg tttgcgatcg gctttgccaa gaagctggcg gccgatccgc
      241 tgggacgcat cgtagacccg gtctggtcgg ctcccgcgca ggcatcttcg attgccttgc
      301 tgctggcgtt gctcgggttt tccgcgcagc tctacctgga tttctccggc tataccgata
      361 tggggcgcgg cgttgcccgc atgctgggat tccgcctccc aatcaacttc cgcgcgccgt
      421 ttttcgcgcg cacgcctggg gagttctatc agcgttggca tgtatcgcta tcgaactgga
      481 ttcggatctt cgtttatgac accctggcga tcacggtgtt tcgcagagtg cgtggacgac
      541 atcggcagaa ccgagcgctt tttgcggtca tcctgctcgt aatggcaatc ttcggactgt
      601 ggcacggcag cgcctggcat tttgtgatgt tcggtgtcgt ccaggggctg gtgattgccg
      661 gttgggctgc agtgaccaaa ggcaaggcgc ctcgcacacg gtttggccag attgcgagct
      721 tgttgatcct gcaagccagt tggctgttct cgttggtgtt gttccgcgcg ggcagcatgg
      781 ccgaggccgg acagtttctg ttcgggctgg tggacggccg gcggtggttc agcgatggcc
      841 tgacatggtg cctcgcggcc atgctggctg cgatcctgct gcaggcggtg gaatattacg
      901 tgcgccggcg accgctcgca cgtgtcttat gctggctgcg aggcagtact gctggcgcct
      961 tgcttgtgtt gctcggattc gccggtactt ttgcgatcaa gctcacggtc gatgcgcatt
     1021 ctatcgccgc cacgggaggc gcccccgctg ccgccagctt catttatttc cggttctagg
     1081 caaccataag atcaccctcg gcgccgttgc attcacggag cgacctgatg ccaccagtcc
     1141 atcgtcgctt tgatctcaac ggtcaaacgg cttttgccga tctttcgggc gatcacaatc
     1201 cgatgcatct ggacctccag gcggcacggc gactgttgtt aggcggagtt gcggtccatg
     1261 gcatccacct gctgctatgg gcattggaca gcgtggtggc gaccggtacg acatggcagg
     1321 cgttagactc ggtacgggcg cattttgaca ggccagcgct gttgggagag gacatcgcgc
     1381 tacagtggca gacttcagac gagcaggtca cggtaaccgc gcacaatgcg gtgggccggg
     1441 tgatgcggct gaaatttaac gcgcgctccg ttccggatcg tcccgtctgg gatgggctgc
     1501 gcattcaacc accgctggtc tgccaggagc aaaggatggc gggactggcg acaatgtcgg
     1561 gtcatttgga tctggtgctg ccagaaagtt ttgccacact gtttccgcat ctgcatgcgg
     1621 cgttttcgcc gctgcaagcc gctatcctgc tggccagcac cagacttgtg ggcatgatct
     1681 gtccaggtag gcactcgtta ttctccggtc tcgccttgca attcgctccc acggctgcca
     1741 cggcaggggc gttggaatac gcggtaagcc gcgccgatga gcgcgtgcgc atggtggata
     1801 tcacgctttc cggatccggc tgctgcggca cattggagac atttctgcgt ccggaaccag
     1861 tcgcgcagct tagctttgcc gcgcttcgcg acgcggtgcc tcggggcagc ttcaccggcc
     1921 agcgtgcgtt ggtgattggt ggagcacgcg gcctcggcga actgacggcc aagctgctgg
     1981 cgatcggcgg cgccgacgtc agcattacct atctgaacgg tgccgatgac gcggctgcga
     2041 ttgtgaccga cggatctgcg gcggggtgct ctctgcaaac gctgcatttc gacgtcgctg
     2101 ccccgcccgg tgatgtggcg gggccggacg gcgggttcac gcacgcctat tacttcgcaa
     2161 cgccgcgcat cgttaccggt ccgccggttg gcttcgccgc ggaattgctg gcacgttacc
     2221 tggaatacta cgtcaccggc ctggcgcgca gcgtggcatg gctgcagtcc cgttccgttg
     2281 cggatttgcg ggtgtggtat ccatcctcgg tgttcgtcga gcaggcccct ccaggattcg
     2341 ccgaatatgc cacggcgaaa gcctgcgggg aggcattgtg tgcgcaaatg acgactcgaa
     2401 tgtcgcccat gcaggtgatc gcggacagac tgccgcgatt ggcgactgac cagacgcaat
     2461 ccctgacgac gcagacgctt gaggacagcg ttgcaattct tcgctcgatc cttctgcgcc
     2521 ttgcctgatg atgcacgggc atggcgcgac acaacaaagc atcgacttcg tcggcggtgg
     2581 gcaggtcgcc gttccatagc aaggcggacc aacggttctg atgcaatttg gccgctgttg
     2641 actctcgccg atgagcggaa ggcgggatca tcgcgaggtt tctcagtttg gatgagttgt
     2701 tcaagggccg ccatttcgac cgcgaggtac tcgtctggtg tagggttcgt ccgccgtctt
     2761 cgtctggccc gagatagcgc acgcggccgg ttgctcggcc agcggcccct ggttacaatt
     2821 caggcctgag agcgccttgg gggcatatat tgcaattgga ttcgataaat aactcagtca
     2881 cgtcagccaa tctgccgcga cggccggagc cggcataatg aaactgacgg tcgtgattcc
     2941 ctgctacaat gagctgaaga cgttagacga gatccttgcg gcggttcatc agtcgccata
     3001 tgccgacaag gaaattatcg ttgtcgatga ctgctcggta gatggcactc gggagaagtt
     3061 gcagaccgag atcgagccat ccggccgcgt cggccgcgtc atttatcatg atcagaacca
     3121 gggcaaaggc gctgcgttgc gcaccggctt caagcacgcg actggcgaca tcgtcattat
     3181 acaggatgcc gatctcgagt atgatccgaa cgagtacccg cttttgctcg agccgatcat
     3241 ttccggcaag gcggatgtcg tgttcggctc acgcttcgtt ggcagccatg ctcatcgcgt
     3301 gctttatttc tggcaccgcg tcggcaacag tttcctcacg ttactgtcga acatgttcac
     3361 cgatctggat ctgaccgaca tggagaccgg ctacaaggcg ttccgtcgcg agatcatcca
     3421 gtccatcgat atcgaggagt cccgcttcgg gttcgagccg gagatcactg ccaagattgc
     3481 caggcgtcca ggtatccggg tatatgaagt tggcatttcc tattatggta gaacctacga
     3541 tcaaggcaag aagattggct ggaaggacgg catgcgggcg atttactgca tcatcaaata
     3601 caacttgttc cgatgaaggt cgtcaaatat ttcttcgtcg gcggcatcgc ggcagtggtc
     3661 gatattggcg ttttctacct tggtgccggc gtggtgggtt ggaactacct gattgtgggc
     3721 gcggtatcgt tcacgctggc cacagtggtc aattatgtga tcagcatacg cgtggtgttc
     3781 cagagtggtg tgcgctttgc gcgacaccat gagttgattc tggtcttcct ggtgagtggc
     3841 gccgggctcg cgatcaatca gctgatcctt tacgcctgca tatcgcgcct tttgctcgcc
     3901 atcttgcccg cgaagcttgt cgccaccgcc ggggtgttcc tgtggaacta cttcataaga
     3961 agccggtttg tcttcgctga cccgagcaaa gccctctcgt gatccacggc gctgtcacgc
     4021 cgaggttaag tgggatcccg gacctcgcac gaaactggat ggtgacgctg ctgttggcgt
     4081 cggtcggatt gatattcgtg gtcggacctt cggtcctcaa cggtggcata cccggcgacc
     4141 tgggcgatgc cagattcaac agttacctcc tggagcattt tttccgctgg atcacccgcc
     4201 aggattcgag tttctggagc gccgatttct tttatccggc tccattgacc atcgcgttca
     4261 gcgacaattt tcttggcgac gcattcgtat atgccctgct ccgtgcggtc ggctttgcgc
     4321 gcgaagacgc attccgcttg tggtacgttg caggatttgt gatcaacttc ggggtcgcca
     4381 actatgtgct tgtccggttg ggctcctcca ggctcgccgc ggcgctcggt gctttcctgt
     4441 tcgccttcgg cctgccggtc acggcgcagg aggaccatgt ccagctggtt tatcgctttg
     4501 gagtcccgct cgcggttctc gctcttgagg aattccgatc gcgccgagag ttgcgccagt
     4561 tgacgctctg cgcattctgg acgacgtggc agctctactg ctcgatctac actggctatt
     4621 ttctgacctt ggttctgctg gctttcatac tcggtcacat attgtgccat acgggcggtc
     4681 caatctctgc cattcggtcc gtgttaaccg tcgcgcgcgt gttgtggatt cgcacaactg
     4741 ccccggcaaa ggcagcgttc ctgctctcga tggcggtcct ggccgcagcg atcgttttgc
     4801 tctgtttgcc gtattttgag gtcagccgcc tgtatggctt caaacggtca tggtccgaga
     4861 tcagcgagat gttgcctcgg ccgacaagct acctgctggc taacaactcg cggttctggc
     4921 caaactatgg gccattgttc gatcgactgc cgatgcgcca ggagcatgcc atgttcatcg
     4981 ggatcgcccc gttcatggcg gtcgtcatcg cagtcgccct acggttgaca gcccgggtca
     5041 gatgggaccg attattcgtt ccaactatgc tggcgatcgt gcttctcatg ctgctgaccc
     5101 tgtcggttga tggtcattca gcctaccgcg tacttgcccg gctgcctggc gcaaacgcaa
     5161 tccgggcggt gacccgaatc attacgatcc tgctgttccc ttggggcatg ttgctggcgt
     5221 cgtcgttgga tacgatcact gctgcacggc ttccggcgtg ggccagatcc ggcatggtcg
     5281 cgctaatcgg aggacttgtg gtcttcgaag cctcgtacat cacgcattac atgctgaccg
     5341 agcaagaatg gcaggcacgg atggcagccg ttgcggcgga attgcctccg gtgatcccgc
     5401 aggcgccgat cttgctgctg gcacccaagc caggcgagca gaatctgtgg cctcgcgaac
     5461 tcgacgccat gttgttcgcc cagaaccatg gttggcgaac gctgaacggt tactccggca
     5521 atacaccgcc tgagtacggc actataagcg actgccagga cgcggctcgc gcgcttgtca
     5581 ccggcatctg gttccgcgac cggtattccg ggcagtccga gcagcgttac gacgcgcttg
     5641 ccagccaggt cgtcatggcc ggctatccgc actgtgacgc tgcggcgctg ccgcgtcatc
     5701 cccgggcgac cgtgttcggc ggtgcgatac aagcgggagt aatggcgaac gttacgctgc
     5761 ggatcgatag cctgaccgta caggatggcc aagttggcgt tgtagtctcg gttgtcaatg
     5821 catcctctgc cacattgccg gccatctcgg cgacagctat gccgattcgg ctctcaaccc
     5881 gctttatcga tactcagact gtgccaccgg acctggaaca cggagcgggc tgggactcgc
     5941 gccaggacat ccctttcgat attcccgctg gcacgtcgca gcaaatcgca ttccatatcg
     6001 ctgcaccgaa agagcccggc agttatcgag tggcggtctc catggtgcag gacggcgtgg
     6061 catggttcca cgatcacggt ttgcatattc ccgtcagtgc cgagaccatt atagtgaacg
     6121 gcgaacatat cgcccacgta tcggacggtg gacgctaacc acgcccccgt ggacgaacac
     6181 cgggtgcgga aggccgcgtc aaactctgcg gtacaaccgg catggcatca ccggaaattc
     6241 gttgagctgg cgcgcagtcc gagcaacata tttctcaggc gttgcccctg aaccgcccag
     6301 ctgcgttctt cgagccatgc ggacgcggcc agctggtggg aagtcctggc cgcctgatcc
     6361 c
//
LOCUS       DATAVD010001038         3000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1960412, whole genome shotgun sequence.
ACCESSION   DATAVD010001038 DATAVD010000000
VERSION     DATAVD010001038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3000
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1960412"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1381)
                     /gene="lptD"
                     /locus_tag="VHX39_19800"
     CDS             complement(<1..1381)
                     /gene="lptD"
                     /locus_tag="VHX39_19800"
                     /inference="COORDINATES: protein motif:HMM:NF016348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0010033 - response to organic substance
                     [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HEX3993424.1"
                     /translation="MRSTLRRLGLIAASLLPVLMTMAANVWAQNSALPGAGPPVSRDE
                     PVTFTADEVEYDRDNNLVTARGHVEVWQAGRIVRADQMSFNRQTGIMVAIGNVVIMQA
                     DGEVLFSQYAELSRDMSEGILKAVRAQLPNNGKMAANGMRRTGGALNELSRVVYTSCD
                     LCKKDPTHAPLWEIHAESAVQDTEHKTIEYRNATLLMDGIPVAYTPWLMHPDPSVPRQ
                     SGILPPVMGSSTELGAFFGVPYYWVIDGQSDATFTPVIATHAGEVLDTQYRRRFNDGT
                     LFVNLATGYELGKLQASLATRGQFAIDDTWRWGFDINRASSSEFVLNQHLLLGLAGDA
                     TVLPSNLYLEGFGQGSYSRLDVKGFQSLVPQVATAELPLVLPRYVYSYVGTPDNLGGR
                     LSVDTGVFDVLRDVGTNTRRANLTLNWQRPFEGPVGDLWQITLHGDAAAYDASQFNEE
                     PNYGLHRNVD"
     gene            complement(1384..2496)
                     /gene="lptG"
                     /locus_tag="VHX39_19805"
     CDS             complement(1384..2496)
                     /gene="lptG"
                     /locus_tag="VHX39_19805"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019090094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HEX3993425.1"
                     /translation="MTLTITLSRYIARQFVTAIVAALVALSLLVAMFDFLELLRRSVS
                     KPDATFALVGEIAALRIPYIMIQILPFAVLLGGLLCFWRLTRTSELIVARAAGVSAWE
                     FLFVPTICALLLGAVTTAGISPLSSAMLARAEALETTYITTGGGPLALNGGQLWLRQS
                     DHELGAKGVAIIHAYGVALHREQLTTGPVSVFRLDDNDHLLSRIEASDGRLTKRQWEF
                     DNARTILPGQLPDAPQQLRLPTDLTVARVQDSFASPDTLSVWVLPDFISLLERSGFSS
                     VRHRLHFESLLALPLLCATMALVAAGFSMRQTRRGGVAKMIGGGASAGFALFTISKVA
                     EEFGQSGALPVFLAAWAPAAAGLMLAVALLLHTEDG"
     gene            complement(2493..>3000)
                     /locus_tag="VHX39_19810"
     CDS             complement(2493..>3000)
                     /locus_tag="VHX39_19810"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEX3993426.1"
                     /translation="IDHQTGRLNVLTFSQNEIDLTDASGPEGERPADMSEVGLGELFN
                     PRLALPRDVPKWVAEAHKRLASPLASISYALVALVSVLTGAFQRHGGFLRPLGSVLTV
                     VLLVALGLTVDGLAARDNALIPLIWLRTLLPGVVCAVILFVPVQWPRRVSRASEPPSE
                     TPIGAASA"
BASE COUNT          643 a          944 c          912 g          501 t
ORIGIN      
        1 tgtcgacgtt gcgatgaaga ccgtaattcg gctcctcgtt gaactgtgat gcgtcatagg
       61 ccgcggcatc accgtgcaga gtgatctgcc acaaatcgcc caccggtccc tcgaacggac
      121 gctgccagtt cagcgtcaga ttcgcccgcc tggtattcgt gccgacatcg cgaagcacgt
      181 cgaacactcc ggtgtccaca gacaatcgcc cgcccaaatt gtccggcgtg ccgacatagc
      241 tgtagacata gcgaggcagc accaaaggaa gttcggcggt cgcgacctgc gggaccaggc
      301 tctgaaagcc tttgacgtcg aggcgggaat aggaaccttg gccaaaccct tccagataaa
      361 ggttgctcgg caacacggtg gcgtcgcccg ccagaccgag cagaagatgc tggttgagca
      421 cgaactcgct ggacgatgca cgattgatgt cgaagcccca acgccaggtg tcgtcgatcg
      481 cgaactggcc gcgggtggca aggctggctt gcagcttgcc caattcatag ccagtggcta
      541 aattgacgaa taatgttccg tcattgaacc ggcggcggta ctgcgtgtcg agcacctcac
      601 ccgcgtgcgt tgcaatcacc ggcgtgaacg tcgcgtccga ttgcccgtcg attacccaat
      661 aatagggcac tccaaagaac gcacccagtt cagtcgaact gcccatgacc ggaggcagga
      721 tacccgactg ccgtggcacc gagggatcgg ggtgcataag ccacggcgta taggcaacgg
      781 gaatgccgtc catcaatagc gtggcattgc gatattcgat cgtcttgtgc tcggtatcct
      841 gcaccgccga ttcagcgtgg atttcccaaa gtggcgcgtg ggttggatcc ttcttgcaaa
      901 gatcgcagga ggtataaacc acccgcgaca attcattcag cgcgccgccg gtccgccgca
      961 tgccgttggc agccatttta ccattgttag gcaattgtgc gcggacggcc ttgagaatgc
     1021 cctcgctcat gtcgcggctc agttcggcgt attgggagaa cagcacctca ccgtccgctt
     1081 gcataatcac gacgttaccg atcgccacca tgatgccggt ctggcgattg aagctcatct
     1141 gatccgcccg gacgatccgc ccggcctgcc agacttcgac atgaccacgc gcggtaacca
     1201 gattgttgtc gcgatcgtac tcgacctcgt cggccgtgaa tgtcaccggc tcgtctcgcg
     1261 acaccggagg accggcgccg ggcagcgcgc tgttttgcgc ccacacattt gccgccatcg
     1321 tcatcagtac gggcaagagg ctggcggcaa tcagacccag ccggcgcaac gtcgatcgca
     1381 tcgtcagccg tcttccgtgt gcaacagcag cgccaccgcc agcatgagcc cggcggcggc
     1441 cggcgcccag gcggcgagga atacgggaag cgcaccagat tggccgaatt cctcggcaac
     1501 cttggagatg gtaaacagcg cgaagccggc cgacgcaccg ccgccgatca tcttcgcgac
     1561 gccgccgcgg cgggtctgtc gcatggaaaa tccggctgcg accaacgcca tcgtcgcgca
     1621 aagcaaaggc aacgccagca aagactcaaa atgcaaacgg tgccggaccg atgagaaacc
     1681 ggagcgttcc aacaaagata taaaatccgg caacacccaa accgacagcg tgtcgggcga
     1741 ggcgaagctg tcctgcaccc gcgccaccgt taagtccgtc ggcagccgta attgctgcgg
     1801 cgcatccggc aactggcccg gcagaatggt gcgcgcatta tcgaactccc attgccgttt
     1861 cgtgagacgt ccgtcagagg cctcgattcg cgacaacaga tggtcattgt catccagccg
     1921 gaagacactg accggtccgg tcgtcaattg ttcgcggtgc agtgcgacac cgtaggcatg
     1981 gatgatggca acgcctttgg cgccgagttc gtgatccgac tggcggagcc agagctggcc
     2041 gccattcagc gccagcggac cgccgccggt ggtaatatag gtggtctcca gggcctcggc
     2101 tcttgccagc atggccgacg agagcggact gatccccgcg gtcgttacgg cacccaacag
     2161 tagcgcacag atagtcggga caaacaggaa ctcccaggcg gaaacgccgg cggcgcgggc
     2221 gacaatcagc tccgatgtcc gcgtcagccg ccaaaagcac agcagcccgc ccaacagcac
     2281 ggcgaacggc aaaatttgga tcatgatgta cgggatccga agcgccgcga tttctcccac
     2341 cagcgcgaag gtggcgtccg gtttgctgac ggaccggcgc agcagttcca gaaagtcgaa
     2401 cattgcgacc agcagggata gcgccaccaa ggccgcgacg atggctgtca cgaactgcct
     2461 ggcgatgtag cgcgacaggg tgatggtcaa tgtcacgcgg aggcggctcc aatcggcgtt
     2521 tcggacggcg gttcggatgc tctggacacg cgcctcggcc actgcacggg aacgaacaat
     2581 atgacagcgc agaccacgcc cggcagcaga gtgcgcagcc agatcagtgg gatcagcgcg
     2641 ttgtcgcgcg ccgccaggcc gtcgacggtc aaacccaggg ccaccaacag cacaacggtc
     2701 aggacggagc ccaacgggcg caggaaaccg ccatggcgct ggaacgcccc ggtcagcacg
     2761 gaaaccagcg ctaccagtgc ataagaaatc gacgccagcg gactggcaag ccgcttatgg
     2821 gcctcggcca cccatttcgg cacgtcgcgc ggcaatgcga ggcgcggatt gaacaattca
     2881 ccaagcccga cctccgacat atccgccggg cgttcgcctt cgggaccgga ggcgtcggtg
     2941 agatcgattt cgttttgcga gaaggtcagc acgttcagcc ggccggtctg gtggtcgatt
//
LOCUS       DATAVD010001039         1504 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3075546, whole genome shotgun sequence.
ACCESSION   DATAVD010001039 DATAVD010000000
VERSION     DATAVD010001039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3075546"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            110..547
                     /gene="msrB"
                     /locus_tag="VHX39_19815"
     CDS             110..547
                     /gene="msrB"
                     /locus_tag="VHX39_19815"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEX3993427.1"
                     /translation="MKRLFGGHDTPAESFPVAHSDEAWRQRLDPAQFHVLRKHGTERA
                     GTSPLNAEKRRGTFACAGCGKALFGSEGKFESGTGWPSFTQPLEGAVATTEDRSLFMT
                     RTEVHCADCGGHLGHVFPDGPRPTGQRYCMNGVAMTFRPADDR"
     gene            675..>1504
                     /locus_tag="VHX39_19820"
     CDS             675..>1504
                     /locus_tag="VHX39_19820"
                     /EC_number="3.1.1.99"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3993428.1"
                     /translation="MSDFELAWDSRCGVAESPVWDVATRRVLFCDINGKRINALSVDT
                     GARQSWDFPEVVGSFGLCRSGRLVVAQRHHVVLFDPKSGAITELTHKIQEPATNRLND
                     GKVGPDGAFWVGGMDENSPRQKIAALYRVTADGEITKQEDGYAVSNGLAWSPDGRIMY
                     HSDSTAGLIEAWNFDPATGGRTHRRVLATLTNTDGRPDGAATDADGNYWSAGPSAGCI
                     NCFSPTGELLHKLPFPVPGPTMPCFADGMLYVTSLREGKSAEQLAKFPTLGGLFRIKA
                     P"
BASE COUNT          297 a          487 c          458 g          262 t
ORIGIN      
        1 ataaagatat aacttaatgt caagatatat cttacgatgt cgcccattaa ttccggaacg
       61 cgcccgatcg aggtaacctg caccgacacc atcaatggag ggcatagcca tgaaacgcct
      121 gttcggcggc cacgataccc cggccgaatc ctttccggtg gcgcacagcg acgaggcgtg
      181 gcggcaacgt ctcgatcccg cccaattcca cgtgttgcgt aagcacggca cggaacgtgc
      241 cggaaccagc ccgctgaacg ccgaaaagcg acgggggaca ttcgcctgcg ccggctgtgg
      301 caaggcgctg ttcggttcgg aggggaaatt cgaaagcggc accggctggc ctagtttcac
      361 ccagccgttg gaaggcgccg tcgcgaccac agaggaccgc agcctgttca tgacccggac
      421 cgaggtgcat tgcgcggact gcggcggtca tctcggtcat gttttccccg acgggccgcg
      481 gccgaccggg caacgctact gcatgaatgg cgtcgccatg acattcagac cggcggacga
      541 tcgataatgg caggaaccgg cgccatgttc gcgccggatg acaatcgctg gatcggcggc
      601 cgaccgccct taaaccgccc gcccggacgt gagatactgc catcccggcg atcagcgccg
      661 aggggagcag ccatatgagc gacttcgaac tggcctggga ctcgcgctgc ggtgtggcgg
      721 aatcaccggt atgggacgtc gccacgcggc gcgtgctgtt ctgtgatatc aacggcaagc
      781 ggatcaatgc cttgtcggtc gataccggag cccgccagtc ctgggatttc cccgaggtcg
      841 tgggtagctt cggcttgtgc cggtccggcc gcctggtggt cgcgcagcgc catcacgtgg
      901 tgctgttcga cccaaaatcc ggcgccatca ccgaactgac gcacaaaatt caggagccgg
      961 cgaccaaccg cctgaacgac ggcaaggtcg ggcccgacgg cgcgttctgg gtcggtggca
     1021 tggatgaaaa cagcccccgt cagaagatcg ccgcccttta ccgcgtcacc gccgacggag
     1081 aaatcaccaa gcaggaggac ggctacgcgg tctccaatgg tctggcttgg tcgccggacg
     1141 gacggattat gtatcattca gattccaccg ccggcctgat cgaggcctgg aacttcgacc
     1201 ccgccaccgg cggccgtacc catcgccgtg tcctggccac gctgaccaac actgacggcc
     1261 gtcccgacgg cgccgcgacc gacgccgacg gcaactattg gtctgctggt ccctcggcag
     1321 gctgcatcaa ttgcttcagt ccaaccggcg aactattgca caaacttccc ttcccggtgc
     1381 caggcccgac catgccctgc tttgccgatg ggatgttgta cgtgacctct ctccgcgaag
     1441 gaaaatcggc cgaacaactg gccaagtttc cgacactggg tggtctgttc cgaattaagg
     1501 cacc
//
LOCUS       DATAVD010001040         5730 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1029519, whole genome shotgun sequence.
ACCESSION   DATAVD010001040 DATAVD010000000
VERSION     DATAVD010001040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5730
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1029519"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..314)
                     /locus_tag="VHX39_19825"
     CDS             complement(<1..314)
                     /locus_tag="VHX39_19825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3993429.1"
                     /translation="MSNSIRNFASSEGPGSVADSASARPAALISNQPLLELRKLSTHY
                     VSAQGSRVVRAVDDVTLTINAGETLGIVGESGSGKSTLALTILRVLPPAARIVGGEML
                     FVG"
     gene            complement(280..1173)
                     /locus_tag="VHX39_19830"
     CDS             complement(280..1173)
                     /locus_tag="VHX39_19830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3993430.1"
                     /translation="MSTTTETGLLAVQLPSRFSFVRSRDFPLVPLAILGTIAFVALFA
                     NLLAPHDPQVGSLSARFRPPCWLAGGSTNYLLGTDQLGRDVLSRLIFGARVSMVVGFT
                     AVIFAGVVGTTLGIIAGYLGGWVDQVVMRIVDAWLALPALSFAIFLAAIVGPSEMNIV
                     IILALVYWTRYARIVRGEVLSLKEREFVRLAVVAGCSKWTIMRRHILPNVVNSAIVLA
                     SLMLGVVIIAEASLSFLGVGVPPPKPAWGVMLSDGKQGLMVGYWWLTVFPGFCIMLMV
                     LSANLLGDWLRVKLDPQLRQL"
     gene            complement(1179..2099)
                     /locus_tag="VHX39_19835"
     CDS             complement(1179..2099)
                     /locus_tag="VHX39_19835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3993431.1"
                     /translation="MKQFIIRRFGYSLLSLLVLSLTIFFFVRVTGDPATLLVEPGASD
                     ADIAALHHQFGLDRPLVVQYLLFMANLLRGDLGQSFYYQMPVVDLYMSRLPNSLLLAA
                     VAMTFSLVVGIPTGMLAAVRVGTFWDSFGKLFTLLGLSLPSFFVGLLMILFFSVYLGW
                     LPSSGSGTARHLIMPAFALGWYFAAAHMRLMRSAMLEVLGSEYIKLARLKGLPQALVI
                     GKHALKNALTPVLTLAGINLVLMINVAVIVETVFAWPGVGRLLYEGVSFRDFPVVQGV
                     VILGGAMIVVVNLLVDVLYAVIDPRIRLEG"
     gene            complement(2195..3769)
                     /locus_tag="VHX39_19840"
     CDS             complement(2195..3769)
                     /locus_tag="VHX39_19840"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3993432.1"
                     /translation="MTTAFDGKPGISLHTSRRDVLGLAAVGALASVARPLQAAEADQQ
                     MTIGVHISLAPTWFDPAETAGIITPFLVLYALHDAMLKPMPGQNPAPCLAESWTASPD
                     GMTYSFVLRPGVTFHNGEKVTAEDVKFSFERYRGAEHATLKGRVASVDIPEPGHVRFS
                     LKEPWPDFLTFYGSATGAGWIVPKQYVEKVGDDGFKRAPIGAGPYKFVSFNPGVELVL
                     EAHEQYWRKTPAVKRIVMRVIPDEATRLAALKRGEVDMALSIRAELAEEVQRTPGLTL
                     KAPVGSAPYWMYFPEQWDPKSPWYDVRVRRAARLAIDRKSINQALTLGFSHLTNSAFP
                     ENFEFFWQPPPPQYDPEQARHLLAEAGFPNGFDAGFYTCDSAYANLGEAVLDNLGAVG
                     IRARLRPLERASFFAGYGDKKFKNIIQGASGAFGNLATRLEAFVVKGGSYAYGNYPEI
                     DELFARQATELDRAKREELLFKIQQIAHDKAIYTPIWQLAFISGVGPRVAQSSFGLIK
                     GFVYPAPYEELALKGA"
     gene            complement(3858..5444)
                     /locus_tag="VHX39_19845"
     CDS             complement(3858..5444)
                     /locus_tag="VHX39_19845"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3993433.1"
                     /translation="MGTFSGGGGPTFPARGPGHLTRRDVLALTAAGLASNVADAGAAP
                     DRQLTYGVHISLAPAWFDPAESTGLITPFMVLYALHDGMVKAMPGQLQAPSLAESVTA
                     SADGLTFDFVLRKGALFHNGDPVTSDDVKFSFGRYHGNASSLLKQRVESIEILDPLHI
                     RFKLKDPWPDFLTFYAGATGAGWIVPRKYVESVGDDGFRKAPVGAGPYKFVSFDPGVA
                     LELEAFDQYWRGAPHVKRLVLKVIPDEATRLAALKRGEIDIAYSIRGELAEELRRTPG
                     LSLKPVAVQGTFGVYFADQWDPKSPWYDLRVRRAAGFAIDCKGINDALTMGFSHVTGT
                     ALFPDMYEFYWQPPAPVYDPAQSKQLLAAAGHPDGFDAGEYFCDSSYANIGEAVVNNL
                     QEVGIRTKLRPVERAGFVKGFTDKAYKNLIQAGPGAFGNVATRLESLVVKGGPFVYGN
                     YPDIDALFPLQAVELDHAKRTAILNKMQQMVYEKAIYAPIWQLAFINGVGPRVAESSF
                     GRIPGFPYTAPYDELALNGA"
BASE COUNT         1186 a         1748 c         1789 g         1007 t
ORIGIN      
        1 cccacgaaca gcatctcgcc gccgacgatt ctcgccgccg gtggaagcac gcgcaggatg
       61 gtcagtgcca gtgtgctttt gccggagccg gattccccta cgatgcccaa agtctcgcca
      121 gcgttgatcg tcagcgtgac atcatcgacc gcacggacca cccggctgcc ttgcgcggag
      181 acgtagtgcg tggagagctt gcgtaattca agcagcggct ggttgctgat caaggccgct
      241 ggccgcgccg atgcggagtc ggcgacggac cctgggcctt cagagctggc gaagttgcgg
      301 atcgagtttg acacggagcc aatctccaag aaggttcgct gaaagtacca tcagcatgat
      361 gcagaatccg gggaaaacgg tcagccacca ataacccacc atcaggccct gcttgccgtc
      421 cgacagcatc acgccccagg ccggcttggg cggcggcacg ccgacgccga ggaatgacag
      481 cgacgcttcc gcgatgatga cgacaccaag catcaatgag gccagcacga tcgcagaatt
      541 caccacattc ggcagaatat gccgccgcat gatggtccat ttcgaacaac ccgcgacaac
      601 ggcgagacgc acgaattcgc gttccttcag cgacagcacc tcaccgcgca cgatccgcgc
      661 gtaccgcgtc cagtagacca acgcgaggat gatgacgatg ttcatctcgc tcggcccgac
      721 gatcgcggcg aggaagatgg cgaagctgag cgcgggcaac gcgagccagg cgtcgacgat
      781 gcgcatgacc acctgatcga cccaaccgcc cagatagccg gcgatgatgc cgagcgtggt
      841 gccgacgaca ccggcgaaaa tcaccgccgt gaagccaacc accatggaga cgcgggcgcc
      901 gaagatcagc cgggacagca cgtcgcggcc taactggtca gtgcccaaca ggtaattggt
      961 actgcctccg gcgagccagc acggtgggcg aaagcgcgcc gagagcgatc cgacctgtgg
     1021 gtcgtgcggc gccagcaggt tggcgaacag cgcgacgaac gcgatcgtgc cgaggatcgc
     1081 aagcggcacg agtgggaagt cgcgtgagcg gacgaagctg aaccgggacg gaagttgtac
     1141 cgcgagcagg ccggtttcgg ttgtcgtact catggcggtc agccctccag tctgatgcgg
     1201 ggatcgatca ccgcgtaaag cacgtccacc aacaggttca ccacgacgat catggcgcca
     1261 ccgaggatca ccacgccctg cacaacggga aagtctcgga acgaaacgcc ctcgtacagc
     1321 agccggccaa cgccgggcca ggcgaacacg gtttcgacga tgacggcgac gttgatcatc
     1381 agcacgagat tgatgccggc caatgtcaac accggggtca aggcattctt gagcgcatgc
     1441 ttgccgatca ccagtgcttg cggcaggccc ttcaggcggg ccagtttgat atattccgaa
     1501 ccaagcactt cgagcatcgc cgatcgcatc agtcgcatgt gcgcggccgc gaagtaccag
     1561 ccaagcgcga aggccggcat gatcaggtgc cgtgccgtgc ccgaacccga ggatggcagc
     1621 cagccgagat agaccgaaaa gaacaggatc atcagcaggc cgacaaagaa cgacggtaag
     1681 gacaggccga gcaaagtgaa cagtttaccg aagctgtccc agaatgtgcc gacccgcacc
     1741 gcggccagca tgccggtcgg aatgccgacc acaagtgaaa acgtcatcgc gacggcggcg
     1801 agcaacagtg agttcggcag ccgcgacatg tagaggtcga ccaccggcat ctggtaatag
     1861 aacgactggc cgagatcgcc ccgcagcagg ttggccatga acagcaggta ctgaacgacc
     1921 aaaggccggt cgaggccgaa ctggtgatgc aacgccgcga tgtcggcgtc gctggcgccg
     1981 ggctcgacaa gcagcgtggc cgggtcgccg gtaacgcgga cgaaaaagaa aatcgtcagt
     2041 gacaacacca gcagcgacaa cagcgagtag ccaaaccgtc ttatgatgaa ttgcttcacg
     2101 agtgctctcc cggacgtttt gtgctcgttg ccgcaagcga agcggtgggc gatcccgggt
     2161 tggtcactgg tgcgtttccg gcgcgggcat cggactaagc tccctttaac gcgagttctt
     2221 cgtatggcgc tggatagacg aaccccttga tcagaccaaa tgacgactga gccacacgcg
     2281 gcccgacgcc agagatgaac gcgagttgcc agatcggggt gtagatcgct ttatcatgcg
     2341 cgatctgctg aattttgaac agaagctcct cgcgtttggc acgatccagc tcggtcgcct
     2401 ggcgggcgaa caattcgtcg atctcgggat agttgccata agcgtagctg ccgcctttaa
     2461 ccacgaacgc ttccagccgg gtcgcgaggt tgccgaatgc gccgctggcg ccctgaatga
     2521 tgtttttgaa cttcttgtcg ccataaccag cgaagaacga tgcccgttcg agcggccgaa
     2581 gcctcgcccg aatgccgacg gcgccgaggt tgtccagtac cgcctcgccc aggttggcgt
     2641 aggcgctgtc gcaggtatag aagccggcgt cgaagccgtt ggggaaccca gcctcggcga
     2701 gcagatgacg ggcctgttcc ggatcgtatt gtggtggcgg cggctgccag aagaactcga
     2761 aattttctgg gaacgcgctg ttggtgagat gggaaaagcc cagtgtcagg gcctggttga
     2821 tggatttgcg gtcgatggcg agcctggccg ctcgccgcac ccgcacatcg taccagggcg
     2881 atttcggatc ccattgctcg gggaaataca tccagtacgg cgcggaccca accggcgcct
     2941 tcagggtcag gcccggcgtg cgctgaacct cttcggcgag ttcggcccgg atcgacaagg
     3001 ccatatcgac ctcacctcgc ttcagcgcgg ccagtcgcgt cgcttcatcg gggatcaccc
     3061 gcatgacgat ccgcttcacg gcgggcgtct tgcgccaata ttgctcgtgc gcttccagaa
     3121 ccagctcaac gcctggattg aaggagacga acttatatgg cccggccccg attggtgcgc
     3181 gcttgaaacc gtcgtcgccg accttttcca cgtactgctt cggcacgatc cagccggcgc
     3241 ccgtcgcgct gccatagaac gtcaggaagt cgggccaggg ttccttcaga gagaagcgaa
     3301 catggcccgg ttccggaatg tccaccgatg cgacacgtcc ctttaaggta gcatgctccg
     3361 caccgcgata acgctcgaag gagaatttca catcctcggc ggtgactttc tcaccattgt
     3421 gaaacgtgac gccgggacgc aaaacgaaac tgtaggtcat gccgtccggg ctggcggtcc
     3481 aggattccgc caggcacgga gcgggatttt gcccaggcat cggcttcagc atggcgtcgt
     3541 gcagtgcgta aagcaccaga aacggcgtga tgatgcccgc ggtctccgcc ggatcgaacc
     3601 aggtcggcgc cagtgagata tgcacgccga tcgtcatttg ctggtccgct tccgccgctt
     3661 gcagcggacg cgcgacagat gccaacgcac ccaccgccgc gagaccgaga acgtcgcgcc
     3721 tgctcgtgtg gagcgagatg cctggcttac cgtcgaacgc tgtcgtcatc ggtccctccc
     3781 ctcggccctt gtggcgagcc gttacgttca aggtggcaat acggcgccac tccgtcggcg
     3841 tatcgttttg gcggcgttca ggctccgttg agtgcgagtt cgtcgtaggg cgcggtgtaa
     3901 gggaaacccg gaatgcggcc gaaactggat tccgccacgc gtggaccgac gccattgatg
     3961 aaagcgagct gccagatcgg cgcgtagatc gccttctcgt acaccatttg ctgcattttg
     4021 ttcaggatcg ccgtccgttt cgcgtggtcc agttcgaccg cctgcaacgg gaacaacgcg
     4081 tcgatgtcag gataattgcc atagacgaac ggaccgccct tgaccaccag gctctccagc
     4141 cgcgtcgcga cattgccgaa cgcgccaggc ccggcctgga tcagattctt ataggccttg
     4201 tcggtgaaac ccttgacgaa gccggcacgc tcgacggggc gcaatttagt gcgaatgccg
     4261 acttcctgga ggttattgac caccgcctcg ccgatattgg cataagaaga gtcgcagaaa
     4321 tactcaccgg catcgaaacc atccggatgg cccgcggcgg cgagcaactg cttcgattgg
     4381 gcgggatcgt aaaccggtgc cggcggttgc caatagaact catacatgtc ggggaacaaa
     4441 gcggtgccgg tgacgtgaga aaatcccatg gtcagcgcgt cgttgatgcc cttgcagtcg
     4501 atggcgaagc cggcggcgcg gcggactcgc agatcatacc aaggtgattt gggatcccac
     4561 tgatccgcga aatacacgcc gaaggtgccc tgaacggcaa ccggcttgag cgaaagaccc
     4621 ggcgtgcggc gcagttcctc ggcgagctcg ccacggatgg aataggcgat gtcgatctcg
     4681 ccgcgcttaa gcgccgccag cctcgtcgcc tcatccggaa tgaccttcag caccagccgt
     4741 ttcacgtgcg gcgcgccgcg ccagtactgg tcgaaagctt ccagttccag cgcgactccg
     4801 gggtcgaacg agacgaattt gtacgggccg gcgccgaccg gtgctttgcg gaaaccgtca
     4861 tcaccgactg attcgacgta ttttcggggc acgatccagc cagctccggt ggcgccagcg
     4921 tagaatgtga gaaagtccgg ccacggatct tttaacttaa accgtatatg caacggatcg
     4981 aggatctcga tggattccac gcgttgcttc agcaggctgc tggcgttgcc gtggtagcgc
     5041 ccgaaggaaa acttcacatc gtccgacgtc accgggtctc cgttgtggaa cagtgcgccc
     5101 ttgcgcagga cgaagtcgaa ggtgaggcca tcggccgagg cggtcactga ctcggcgagc
     5161 gacggcgcct gaagctggcc aggcatcgcc ttcaccatgc cgtcgtgcag cgcgtaaagt
     5221 accatgaacg gggtaatgag gccggtggat tcagctggat cgaaccaggc gggcgccagc
     5281 gagatatgca cgccgtaggt caactgccgg tctggcgcgg cgccggcgtc agcaacattt
     5341 gaggccaggc cggccgccgt gagcgccagc acatcccgtc gcgtcagatg gcctgggcca
     5401 cgcgcgggga acgttggtcc tccgccgccc gagaacgtcc ccattgttac ctcccttatt
     5461 ggcgtccggc gtaatggagt tcaggccgca atgaaagggc aaaatctcga cggtggcggg
     5521 agcattcatt ttcgaggcag gattagcgat aagtcatatc gccggttcac gccgttgttt
     5581 tcggatggcg gcgctcgcct gagacatggt gctgcgttgt cgggattgtg gtaaagatga
     5641 accacatccg ttgcgtttgc ttctgaccgg cacgttagcc ggccttgtta cccatagtat
     5701 ggcgtcccgc tcccgtcggc cccgccgttc
//
LOCUS       DATAVD010001041         1666 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2705759, whole genome shotgun sequence.
ACCESSION   DATAVD010001041 DATAVD010000000
VERSION     DATAVD010001041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2705759"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..296
                     /locus_tag="VHX39_19850"
     CDS             <1..296
                     /locus_tag="VHX39_19850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3993434.1"
                     /translation="FSAKAGIHAWAKGLSIEVGQYGITVNSIPPGRIMSEQIRRNYPD
                     DFRKTFAETEIPVKYWGEPEDLAVMAVWLASPLARYITGTVIPVDGGLRRYSF"
     gene            345..>1666
                     /locus_tag="VHX39_19855"
     CDS             345..>1666
                     /locus_tag="VHX39_19855"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434969.1"
                     /note="This protein belongs to a clade of FMN-dependent
                     monooxygenases, within a broader family of
                     flavin-dependent oxidoreductases, the luciferase-like
                     monooxygenase (LMM) family, some of whose members use
                     coenzyme F420 rather than FMN; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NtaA/DmoA family FMN-dependent monooxygenase"
                     /protein_id="HEX3993435.1"
                     /translation="MREMVLVGFLQAQNCTTLASAWRHPDARSDFTSAAYYRKIGEVL
                     EAGKFQMGFFDDRLAMPDIYGGNPAEVVANGVRVVKIDPVATMMAMGLGTQFLGIGST
                     ASTTYYEPFDVARRFQTVDHLIGGRAAWNVVTSVNDGEAHNMGRDVHMDHDLRYDRAD
                     EFMEIVHSCWDGWEDDALVVDKASGVFAHPEKVHRLEYEGKFLKSHGTFTVPRSPQGH
                     PVVIQAGSSPRGKVFAARWAETMFVGYPDFATAQRDYAAMKASIAGLNRDPDKVTINT
                     IAYPVVAETRAEAEDKWTLIDSLYREVDGLSLLSEALNYDFKKKAMDEAFSDEELEGM
                     SGMQAMRNRVMQQTGRNPTVRDFLNVTRRGRPREAIVGSAKDVADRLEKWFVERACDG
                     FVIAGTHTPGSFEDFVKFVVPELQRRGLYQTDYKGATLRENLGLGMPEL"
BASE COUNT          332 a          473 c          543 g          318 t
ORIGIN      
        1 cattctcggc caaagccggc atccacgcat gggccaaagg tttgtccatc gaggtcggcc
       61 aatacggcat tacggtgaac tcgattcctc ccggccgtat catgagcgag caaattcgcc
      121 gcaattatcc ggacgatttc cggaaaacct tcgccgagac ggagatcccg gtgaaatact
      181 ggggcgaacc ggaggatctt gcggtgatgg cagtttggct ggcatcgcca ttggcgcgtt
      241 acatcaccgg aacggtcatt ccggtcgacg gcgggctgcg gcgctattcc ttctgaggcg
      301 tcgccgccca agactccggc cgcaatgccg gacggagcgg cgcaatgcgt gaaatggtcc
      361 tggtcggctt tctgcaggcg cagaactgca caacgctggc gagcgcatgg cggcatcctg
      421 acgctcgttc cgatttcacg tctgcagcct attaccggaa aatcggcgag gtcctggaag
      481 ccggcaaatt ccagatggga tttttcgatg accggctggc gatgccggat atttacggcg
      541 gcaatcccgc cgaggtcgtt gcgaacggtg tacgcgtggt gaaaatcgat ccggtcgcca
      601 cgatgatggc gatgggactt ggcacgcaat tcctcggcat cggttcgacg gcttccacga
      661 catactacga gccgttcgat gtcgcgcggc ggttccagac cgtcgaccat ttgatcggcg
      721 ggcgggcagc ctggaacgtt gtcacctcgg tcaacgatgg cgaggcgcac aatatgggcc
      781 gcgacgtgca tatggatcac gatctgcggt acgaccgggc cgacgagttc atggagatcg
      841 tgcacagttg ctgggacggt tgggaggatg atgctctggt ggtcgataag gcatccggcg
      901 tgttcgctca tccggagaag gtccaccgcc tggagtacga aggaaaattc ctgaaatcgc
      961 atggcacgtt cacggtgcct cggtcgccgc agggccatcc ggtggtgatc caggccggct
     1021 ccagcccgcg ggggaaagtg ttcgctgcac gatgggccga aacgatgttt gtcggttatc
     1081 cggattttgc cactgcacaa cgcgattacg ctgccatgaa ggcgtcaatc gcgggtttga
     1141 accgcgatcc cgacaaggtg accatcaaca ccatcgccta tccggtggta gccgaaaccc
     1201 gtgccgaggc ggaagacaag tggaccttga tcgactcgct gtaccgcgag gtcgacggtc
     1261 tgtcgctgtt gtcggaagcg ctgaactacg acttcaagaa gaaggccatg gatgaggcgt
     1321 tcagcgacga ggaactcgaa ggcatgtcgg ggatgcaggc gatgcgcaac cgggtgatgc
     1381 agcagaccgg ccgcaatccc accgtgcgcg acttcctcaa tgtcacccgc cgcgggcgcc
     1441 cgcgcgaggc gatagtcggc agcgccaagg acgtggcgga ccggctggag aaatggttcg
     1501 tcgagcgagc ctgcgacggg ttcgtgattg ccggcacgca tacgcccggc tcgttcgagg
     1561 attttgttaa attcgtcgtg ccggaattgc agcgccgcgg tctgtaccag acagactaca
     1621 agggtgcgac cctgcgtgag aacctcggcc ttggaatgcc ggagct
//
LOCUS       DATAVD010001042         2436 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2521443, whole genome shotgun sequence.
ACCESSION   DATAVD010001042 DATAVD010000000
VERSION     DATAVD010001042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2521443"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2030)
                     /locus_tag="VHX39_19860"
     CDS             complement(<1..2030)
                     /locus_tag="VHX39_19860"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX3993436.1"
                     /translation="MRTEMDLSGHVDEISRSVIQGWVIDTERPDASIALSIFVNGVHR
                     GMCLTTYTRDDLVSPNGEKLASKCGFHFQFEPLLSPFIEHRIEVVEIWSGQVLRNGSQ
                     ILPCPLSHEGHGGGMVPVLLTSTGRAGTTLLMSEFARHPDLVVGDQFPYEIKQIAYHA
                     AAFRALVADADWERSTKPETMLAPEMRSIIGSNPYNLSGLFGLGGGSHALRRFYHSEV
                     PTGYATLFRQFLKDFYATLANAQGKQSAPYFCEKGDLDEAAVLGSRLFFDTVKDIVIV
                     RDPRDLLCSAIAFWKLQAETALKMLASTVPRLTHIARHAGPDTIIIRYEDLVREPVPT
                     RQALSRFLDVDLLSHPEAEAEVVPDSHRTSSDPAASIGRWRNDLTPQQVEACELAFGA
                     LLHDFDYELSTSAGQRGRRKRRRDQIVVAEGKINLAAFAENYTAESEDGSASRQVLEL
                     IFGRDGTGEMFIREGWAPPERGFIWSNAPESRLLLPPIRGKGKYRLHIVATPFIHGTA
                     LPAQRVTMLLNGHVAGTAQARATCVLSIPVPAAVAGSGHAIEFTLRFPDAAQPSEVLG
                     SNDNRLLGISLHRIALFQTEPVPDTLASGKPARRSRGEVAPDSEAAPPQSWACEKSET
                     LVVARLTEVLREAFRLPGLDYHGRTVLRKISGYDTTRFVRFVLGLETEFGIT"
     gene            complement(2020..>2436)
                     /locus_tag="VHX39_19865"
     CDS             complement(2020..>2436)
                     /locus_tag="VHX39_19865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993437.1"
                     /translation="PYELRWPAFVSEIGAGTEARQHANAVTLGYLRRKFYEGLRTGRK
                     IYVLKQRRALCLAELTVLITELNRSGNATLLCVAEAQSERLRGAVELLLPGLMRGYVG
                     RFAPDTDVEAADPADWLRVLANATLLQRRPNTTVAH"
BASE COUNT          486 a          769 c          710 g          471 t
ORIGIN      
        1 aacgtgatgc cgaattcggt ttccaacccc aggacaaacc gaacgaatct ggtggtgtcg
       61 taaccgctga tcttccgcag tactgttcgc ccgtggtagt ccaaacctgg cagtcggaac
      121 gcctcgcgca atacttcggt caaacgggcc actacgagcg tttcgctttt ctcgcacgcc
      181 caggattgcg gtggggcggc ctcgctgtcc ggcgcgacct cgccgcggga tcggcgagcc
      241 ggtttcccgg acgccaaagt gtccggcacc ggctcggtct gaaacagtgc gatccgatgc
      301 aatgaaattc ccagcagccg gttgtcgtta ctgccaagca cttcggatgg ttgtgcggca
      361 tccgggaagc gcagagtgaa ctcgatcgcg tgccccgatc cggccacggc cgccgggacc
      421 ggaatcgaga gcacacatgt agcacgcgcc tgtgccgtcc cggccacgtg cccgttgagg
      481 agcatggtca ccctctgggc cggcaacgcg gtgccgtgga tgaacggtgt ggcaacgata
      541 tgaagccgat atttgccttt gccccggatc ggcggcagca gcaggcggct ttcgggcgcg
      601 ttgctccaaa tgaagcctcg ctcgggcggt gcccaacctt cgcgaatgaa catctcgccg
      661 gtgccgtcgc gaccgaatat caactccagc acctggcgtg aggccgatcc gtcctcgctt
      721 tcagcggtat aattttcggc gaaggcggcc aggttgatct tgccctctgc caccacgatc
      781 tggtcccttc gccgcttgcg acggccgcgc tggccggcag acgtactcaa ttcatagtcg
      841 aaatcatgta acaacgcgcc aaaggccagc tcgcatgctt cgacctgctg cggcgtcaga
      901 tcgttccgcc aacggccaat cgatgccgcc gggtcgctgc tggttcggtg gctgtccggg
      961 accacctccg cctcggcttc aggatggctc agcagatcga cgtcgagaaa ccgggacaaa
     1021 gcctgccttg tcggcacggg ttcacgcacg agatcctcgt aacggataat gatcgtgtcc
     1081 gggcctgcat ggcgggcgat gtgggtcagg cgggggacgg tcgacgccag catcttcaac
     1141 gctgtctccg cctgcagctt ccagaatgca atcgccgagc acaacagatc gcgcggatcg
     1201 cgcacgatga cgatatcttt cactgtgtcg aagaatagcc tggagccaag cacggctgct
     1261 tcgtcgaggt cgcccttctc gcaaaaatac ggcgccgact gcttgccttg tgcgttcgca
     1321 agcgtggcat aaaagtcctt gaggaattgc cggaacagcg tcgcgtaccc cgtcgggacc
     1381 tcggaatggt aaaatctgcg cagcgcgtgg ctgccaccgc cgagaccaaa caatccgctc
     1441 aaattatacg gattactgcc gataatgctg cgcatctccg gcgccagcat ggtctccggt
     1501 ttggttgacc gttcccagtc ggcatccgcc accagcgcac gaaaggcggc cgcatggtac
     1561 gcaatttgct ttatttcgta aggaaactga tcgccgacga cgaggtctgg atgccgggcg
     1621 aattcactca tcagcagcgt ggtgccggca cggccggtcg atgtcagcaa gacaggaacc
     1681 atcccgcctc catgaccttc gtgtgacagt gggcacggca ggatctggga accattccgc
     1741 aacacctggc ccgaccatat ctcgaccacc tcgatccgat gttcgatgaa cggtgacaac
     1801 agcggttcga actggaaatg gaacccgcat ttgctggcga gcttctcgcc attcggtgac
     1861 accagatcgt cgcgcgtgta cgttgtcaga cacatgccgc ggtgcacgcc gttgacaaaa
     1921 atcgatagtg caatggaagc gtccggacgc tccgtatcga tcacccagcc ttggatgacc
     1981 gagcgagaaa tctcatcgac atgtccggac agatccatct cagtgcgcaa cggtcgtgtt
     2041 cggccggcgt tgcagcagcg tcgcattggc gagcacacgc agccagtctg ccggatcggc
     2101 agcttcgaca tcggtgtcgg gggcaaagcg accgacatat ccacgcatca ggcctggcag
     2161 cagcaattcg accgcacccc gcaaccgctc gctctgggct tccgccacgc acaatagtgt
     2221 agcattgccg ctccggttca gttccgttat caaaacggtc agctccgcca ggcaaagtgc
     2281 ccgacgttgc ttcaacacgt agattttccg gccggttcgc agcccttcgt aaaatttccg
     2341 ccgcaaataa ccgagcgtga ccgcgttggc gtgttgcctt gcttcagtgc cagcgccaat
     2401 ctccgaaaca aatgccggcc aacgcagctc gtatgg
//
LOCUS       DATAVD010001043         2241 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3076398, whole genome shotgun sequence.
ACCESSION   DATAVD010001043 DATAVD010000000
VERSION     DATAVD010001043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3076398"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1510)
                     /locus_tag="VHX39_19870"
     CDS             complement(<1..1510)
                     /locus_tag="VHX39_19870"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEX3993438.1"
                     /translation="MCKANYPVLIVLLPLALESVAFADEVPQATATSQSPTERVVISG
                     TRQSEQNYRVPAVDSIGPLGSTPVLDIPYSIAILPHDLLENSQAVNFKDASKYLPLVA
                     FQEQQGPDILRPQTRGLQGGNFQNSKQDGMTMFITGAEALEQFEQIEVVNGLSASLYG
                     PANPSGMFNFVTKRPTDYDLREVTASYVSDSVGTIKADLGGRIDPGGMVSYRVNGVYG
                     SGDGFVDESHQRRVLGDLGIDVRPWQHGVLELNYSNYTLIDTGYPGWFTYSETVHLPP
                     TPDPGRVGFGQSYAGTELRTQTSSARTKQDFGSNWHLVAGILNQDATRNINTPVNNLT
                     SNSGNYTASFANGFAPRFVITSDTAYLNGSFDTLGIGHDFTLGTAGYRSSSYSVITPA
                     TAASVRLGTANIYDPVIFPEPAAGPPNVFLNYDSSDVYQQGININDLLKLTDQWSARV
                     GASQDWFHTNNFNNKSVRTTQYVDHGVSPTASIIFKPAVNMTTYFTYASALQA"
     gene            complement(1666..>2241)
                     /locus_tag="VHX39_19875"
     CDS             complement(1666..>2241)
                     /locus_tag="VHX39_19875"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HEX3993439.1"
                     /translation="RSVRFGGEKAVAELAGKPLLMWAAARLARSCPMVAVNVRPDTEA
                     EALARAEGLTIMNDLPGDAAGPLSGVKVGLQWAQKLGARAIAVSPCDVPLLPEDIFAR
                     LIEQAGTGAAMAETSEGHQPQCAVWPVSALPKLTDALANGAHPPTWLMLENVGAVRVR
                     FPAADAFANVNTREDLAAIAGRLERGECQLR"
BASE COUNT          417 a          661 c          722 g          441 t
ORIGIN      
        1 cggcctgcaa cgcgctcgca tacgtgaagt acgtcgtcat gttgacggcc ggcttgaaga
       61 tgatgctggc tgtcgggctg acgccgtggt cgacgtactg cgtggtgcgc acactcttgt
      121 tgttgaagtt gttcgtgtgg aaccagtcct ggctggcgcc gacgcgcgcc gaccattggt
      181 ccgtgagctt cagcaggtca ttgatgttga ttccttgttg ataaacatcg gaggaatcgt
      241 aattgagaaa gacgttcggc ggacccgcgg ccggctctgg aaaaatgacc ggatcgtaga
      301 tgttcgcggt accgaggcgc acgctcgcgg cggtcgcggg cgtgatcacc gaataggacg
      361 aggagcgata gcccgccgta ccgagcgtga aatcgtgtcc gatccctaaa gtatcgaagc
      421 taccgttcaa ataagcggtg tcactcgtga tgacgaagcg cggcgcgaag ccgttcgcga
      481 acgaggccgt atagttgccg ctgttggaag tcaggttgtt caccggcgtg ttgatattcc
      541 gggtcgcatc ctggttgaga ataccggcca ccaggtgcca attcgagccg aaatcctgct
      601 tggtgcgggc actcgacgtc tgggtgcgta actccgtgcc ggcatacgac tgtccgaaac
      661 ccacccggcc cgggtccggc gtcggcggca gatgcacggt ctcgctgtag gtgaaccagc
      721 ccgggtaacc cgtgtcgatc agagtgtagt tgctgtagtt cagctccaac acgccgtgct
      781 gccaggggcg cacatcgata ccgaggtctc ccagtacccg gcgctggtga ctttcatcaa
      841 caaaaccgtc accgctgccg tacacaccgt tgacacggta gctgaccatg ccgcccggat
      901 cgatgcggcc gccgagatcc gccttgatgg tacccacgct gtcgctgacg tagctcgccg
      961 ttacctcacg cagatcgtag tcggtgggcc tcttggtcac gaagttgaac atgccggaag
     1021 ggttggccgg accgtacaag gaagccgaca gaccgttgac gacctcgatc tgctcgaact
     1081 gctccagggc ttcggcgccg gtgatgaaca ttgtcatccc gtcttgcttc gagttctgga
     1141 agttgccgcc ctgcagacca cgggtctgcg ggcgcaggat gtccgggccc tgctgctcct
     1201 ggaaggccac cagcggcagg tacttcgagg cgtccttgaa gttgaccgcc tgagagttct
     1261 cgaggagatc gtgcggcagg atggcgattg aatacggaat gtctagaaca ggggtgctgc
     1321 cgagtggacc gatactatca acggcaggca cgcggtaatt ctgctcgctc tggcgagtgc
     1381 cggatatcac caccctctca gttgggctct gggaggtggc tgtggcttgc gggacctcgt
     1441 ccgcgaaggc gacggattcg agcgccaacg gcaggaggac aatcaacacc gggtagttcg
     1501 ctttgcacat cgttctagct cgtggaatac agcgcgcgga agctatcacg cgcgctgcga
     1561 gcgaacgata tgcacgaccg cgcataggtt ttcgcgtggt tcacgaacaa gaccggttat
     1621 gaattgcgct tcagatgctg gcgtcgaggc gcacggcgat ggacttcagc gcaattggca
     1681 ttcgccgcgc tcgaggcgcc cggcgatggc cgcgagatcc tcccgcgtgt tgacattggc
     1741 gaaggcgtct gctgcgggaa accgcacgcg gaccgcgccg acgttttcca acatcagcca
     1801 ggtgggcgga tgcgcaccgt tggctaatgc gtcggtcagt tttggcaagg cgctcacggg
     1861 ccacaccgcg cactgcggct gatgcccttc cgaagtttcc gccatggcgg cgccggtgcc
     1921 tgcttgttcg atgaggcgag cgaaaatgtc ctcaggcaac aacggcacat cgcagggact
     1981 caccgcgatg gcgcgggctc ccagcttttg cgcccattgc agtccaacct ttacgccgga
     2041 gagagggcca gcggcgtcgc cgggcaggtc gttcataatc gtgagcccct cggcgcgggc
     2101 tagcgcttct gcttcggtgt cagggcgcac gttcacggca accatgggac aactgcgcgc
     2161 taatcgcgcg gccgcccaca tgagaagggg cttgcctgcg agttcggcca cggccttttc
     2221 cccaccgaaa cgtacagagc g
//
LOCUS       DATAVD010001044         2869 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2892101, whole genome shotgun sequence.
ACCESSION   DATAVD010001044 DATAVD010000000
VERSION     DATAVD010001044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2892101"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(83..1543)
                     /locus_tag="VHX39_19880"
     CDS             complement(83..1543)
                     /locus_tag="VHX39_19880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HEX3993440.1"
                     /translation="MPDRCPSGSLDPADWDELRRDGHRMLDTMFDHMQSLRDQPVWQP
                     PPPDRLTAIRETLPRAPTRLHDVHAQFVRSILPYSSGNAHPGFMGWVQGGGTPVGMLA
                     DMLAAGMNANLGGRDHMAIEVERQMIAWTRDLFGFPDTASGLFVTGTSQANFMGVLVA
                     RSRALGSQVRDRGLAAVGRHLTAYTSAAAHGCIARAMEMAGLGRERLRLIPVDAEHRI
                     RIAALRQAIAGDRANGREPFLLIGTAGTVDVGAIDELTALAEIAAAERLHFHVDGAFG
                     ALAILSPELAPLLSGIERADSLAFDWHKWGQVPYDSGFLLVRDGALQRQTFAAEAAYL
                     RRAERGLAGGDWWPCDYGPDLSRGFRALKTWFTLKTYGADAIGRVTAGTVALAQRLAA
                     RVVAEPELELLGPVPLNIVCFGYRSADADRLNAEIVADLHEQGRVAPSLTTIGGRTAI
                     RAAIVNHRTAPEDVDALVESVLVCGRAARVLQDACV"
     gene            complement(1619..2464)
                     /locus_tag="VHX39_19885"
     CDS             complement(1619..2464)
                     /locus_tag="VHX39_19885"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3993441.1"
                     /translation="MLHRFKIGTMAATIVSDGPLLLHAPEQIFLGPGAVALGASLTAA
                     GQPSDKIRVEQNCLLLETAGKKVLFDNGMGSEKLYGPDSGRLLHNLRAAGVEPSEIDA
                     MVLTHAHSDHCWGTMGDDGMPNFPNATLYLSQAELDFWSSAAAEQRMARSIAGFRKHI
                     LPLRDRIRLIRNGEEFLPGVHALATPGHTPGHMAFLFDGGWCLTGDVAFHDPLSYDFP
                     EAESVYDTDRDLGVRTRLRLLDRLVTERLSIVGYHHPWPGLGRLERVSGSFGFMPEQQ
                     QADRS"
     gene            complement(2464..>2869)
                     /locus_tag="VHX39_19890"
     CDS             complement(2464..>2869)
                     /locus_tag="VHX39_19890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007399309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M24 family metallopeptidase C-terminal
                     domain-containing protein"
                     /protein_id="HEX3993442.1"
                     /translation="GIDYDHGTGHGVGSYLSVHEGPVSISRLARPVPIGAGMILSNEP
                     GYYLPGQYGIRLENLVLVQPATLPAATRPFLRFETLTLAPFDRNLIDPELLDPWELAW
                     LNAYHARVLQELAPHVEPPVRAWLASACESID"
BASE COUNT          554 a          924 c          919 g          472 t
ORIGIN      
        1 tgcctttcaa aggagcctgg cgccggcggt tccattgtgc aagcggggac caacgatccg
       61 ggcgggccaa aacattgcag cgtcagacgc aagcatcctg aagtactcgc gccgccctgc
      121 cgcacacaag cacggactcc acgagtgcat cgacatcttc tggcgcggtc cgatgattga
      181 cgatggcggc acggatggcg gtccggccgc cgatggtggt caaggatggc gcgacccgac
      241 cttgctcatg caggtccgcc acgatctcgg cattcaggcg gtcggcatcg gcgctgcggt
      301 agccgaagca cacgatattc agcggtactg ggccgagcag ttccagttcc ggctcggcaa
      361 cgacgcgtgc ggcgaggcgc tgtgccaggg cgaccgttcc ggcagtgacc cgaccgatcg
      421 cgtcggcacc atatgtcttc agcgtgaacc acgttttcag cgcgcgaaac ccgcgcgaca
      481 ggtcggggcc gtagtcgcaa ggccaccaat cgccgccagc aagacctcgt tcggcccgcc
      541 gcagatacgc cgcctctgct gcgaaagtct gtcgttgcag agcaccgtcg cgcaccagca
      601 ggaagccgga atcatacgga acctggcccc atttatgcca gtcgaacgcc agtgagtcgg
      661 cccgctcgat gccggacagc agcggcgcga gttcgggcga gagtatcgcc agcgctccga
      721 aggcaccgtc gacatgaaaa tggagccgct ccgctgcggc gatttcggcg agcgcggtga
      781 gctcatcgat cgcgccgaca tcgaccgttc ccgcagtccc gatcagcaga aacggctccc
      841 gcccattggc gcggtcgccg gcgatcgcct gccgaagagc ggcgatgcgg atccgatgtt
      901 cggcatcaac gggaatgagc cgaagccgct cccggccaag tcccgccatc tccatggctc
      961 tggcgatgca accatgggca gccgcagagg tgtaggcagt caggtgccga ccgaccgcag
     1021 ccaggcctcg gtcgcgaacc tgcgagccca gcgctcggct acgtgcgacg agcacaccca
     1081 tgaagttggc ctgggacgtt ccggtgacga aaagaccgct cgcagtatcg gggaagccga
     1141 acaggtcgcg ggtccaggca atcatctggc gctcgacttc aattgccatg tgatcgcggc
     1201 cgcccaggtt ggcgttcatc ccggcggcga gcatgtcggc gagcatgccg accggggtac
     1261 cgccaccctg cacccaaccc atgaaccccg gatgggcgtt gccactggaa tacggcagga
     1321 tcgacctgac gaattgcgca tgaacgtcgt gcaggcgggt gggcgctcgt ggcagagttt
     1381 ctcggattgc ggtcagccga tcaggcggtg gcggctgcca aaccggctgg tctcgcagcg
     1441 attgcatatg gtcgaacatg gtgtccagca tgcgatgacc gtcgcggcga agttcgtccc
     1501 agtcagcggg atcgagcgaa ccgctcgggc accggtcagg catggctgcg acctccagaa
     1561 cccgcacgat gcgatcggcg gtccgcgcac ccttacaagt gacgtggtga attcctggtt
     1621 aagatcggtc cgcctgctgc tgttcgggca tgaagccaaa gcttccgctc acccgttcca
     1681 gacggccgag gcctggccat ggatgatgat agccaacgat cgacaaacgc tcggtcacca
     1741 gccgatccag caggcgcagc cgggtgcgga caccgaggtc gcgatcggtg tcgtagacgc
     1801 tctccgcctc ggggaagtca taagagagcg gatcgtggaa cgcgacgtcg ccggtcagac
     1861 accagccgcc atcgaacaga aaggccatat gcccgggggt gtgtccgggc gtggccaggg
     1921 catgaacgcc ggggaggaat tcctccccat tgcggatcag ccgaatgcgg tcgcgtaacg
     1981 gcagaatatg cttgcggaag ccggcgatgc tgcgcgccat ccgttgctcc gctgccgccg
     2041 aactccagaa gtccagttcg gcctgcgaca gatacagtgt cgcattgggg aaattcggca
     2101 tgccgtcatc gcccatggtc ccccaacagt gatcggagtg cgcgtgggtc agcaccatgg
     2161 catcgatttc ggacggctcg acgccggcag cgcgcagatt gtgcaacagg cgtccactgt
     2221 cgggaccgta gagtttctcc gaccccatgc cgttgtcgaa cagcactttc ttgccggcgg
     2281 tttccaacaa cagacagttc tgctcgaccc gaattttgtc ggacggctgg ccggcggcgg
     2341 tcaacgatgc gcccaacgcg actgctccag gacccaggaa gatttgttcc ggggcatgca
     2401 acagcagcgg cccgtccgaa acgatcgtcg cagccatcgt cccgatcttg aaacggtgca
     2461 gcatcagtcg atgctttcgc aagccgaggc gagccaggca cgcaccggcg gttccacatg
     2521 cggcgccagc tcctgcagca cgcgtgcatg ataggcgttg agccaggcca gctcccacgg
     2581 gtcgagcaac tcagggtcga tcaaattgcg gtcgaaaggc gccaaagtca gcgtttcgaa
     2641 gcgcaggaac ggccttgttg cggccggtaa cgttgccggc tgcaccagca ccagattttc
     2701 caggcggatg ccgtactgtc ccggcaggta atagcccggt tcgttggaca gaatcatgcc
     2761 cgcaccgatc ggcaccggtc gcgcaagtcg cgagatgctg acaggacctt cgtgcaccga
     2821 caggtagctc cccaccccgt gacccgttcc gtgatcgtaa tcgatgccg
//
LOCUS       DATAVD010001045         2202 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_659494, whole genome shotgun sequence.
ACCESSION   DATAVD010001045 DATAVD010000000
VERSION     DATAVD010001045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2202
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_659494"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VHX39_19895"
     CDS             complement(<1..368)
                     /locus_tag="VHX39_19895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993443.1"
                     /translation="MHRQTVFLARLFGLGMTIIAIWILVDEADLGTIVQQLVRDRPAT
                     FLLSLICLVSGLAVVVGHQVWSGGIAPVLVTLVGWLLLLRGLVLLFLPANLLESLADA
                     LVGARWLYFAGTVALVFGLIL"
     gene            433..1236
                     /locus_tag="VHX39_19900"
     CDS             433..1236
                     /locus_tag="VHX39_19900"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HEX3993444.1"
                     /translation="MIDPVGQHAPLLFRRWLLGAPFALVPALPGNAAHVVLAATPISR
                     MDLPWWRERHVAKLAELRRVRPNLIFLGDSITQDWEDAGPEPWRNFVPEWQRFYGDRN
                     AVNLGFKGDTTASLLWRIRNGETDGITPKVAVILIGANNLGRLHWSAADSLLGIDTII
                     ADLHRRLPATRILLLSVLPSERSDWTTQTTVAINRALAEKYAHDPVVTFVDVTTIFMK
                     DGRLNKDLYLDPKLKPPDPPLHPTAQGQALMSAAMEPVLAGLLGDKPHQ"
     gene            1249..1551
                     /locus_tag="VHX39_19905"
     CDS             1249..1551
                     /locus_tag="VHX39_19905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEX3993445.1"
                     /translation="MAKGYWIARVDVTDPDGYQAYVKANAAAFSKFGARFIIRGGQFA
                     APEGTPRARNIVLEFADYATAVACYHSPEYQAAKALRIGKGVADIVIIEGYDGVQP"
     gene            1684..2049
                     /locus_tag="VHX39_19910"
     CDS             1684..2049
                     /locus_tag="VHX39_19910"
                     /inference="COORDINATES: protein motif:HMM:NF018050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEX3993446.1"
                     /translation="MLQTVIETPDFIRDAERAGLSAEERGKIVALIAALPKSGADIPG
                     TGGARKIRFAGRGKGKSGGYRVISFYAGPDVPVFLLNVFAKGDKIDLTMAERNELRKE
                     LAGLADDYRDGVRRHVQGW"
BASE COUNT          465 a          629 c          696 g          412 t
ORIGIN      
        1 aggatcaggc cgaaaacgag cgcgactgtg ccggcaaaat acaaccagcg cgccccgaca
       61 agagcgtccg ccagcgactc gagcaggttg gccggcagaa acagcagcac caacccgcgc
      121 agcagcaaca gccaaccgac caaggtgacc aggactggcg caatgccgcc ggaccaaacc
      181 tggtgaccca ccaccacggc gagacccgat acgaggcaga tcaggctcaa caaaaacgtc
      241 gccggccgat cacgaaccaa ttgctgcacg atcgtgccga ggtctgcttc atccaccagt
      301 atccagatcg cgatgatcgt catgcccaaa ccgaacaacc gggcgaggaa aacggtttgc
      361 cggtgcattg cacgactccc atcgcggttt agactgcggc gtggtgtcgc cccacgcgag
      421 gagagatttg cattgatcga tcctgttggc caacacgcgc cattgctgtt ccgccgttgg
      481 ctgctcgggg caccgttcgc tctggtgcct gcgttgcccg gcaatgcggc gcatgtagtg
      541 ctggcggcaa cgccgatttc gcgcatggac ctgccatggt ggcgggagcg gcacgtcgcc
      601 aagctcgcgg aactgcggcg ggtgcggccc aatctgatct ttctgggcga ctcgatcacc
      661 caggactggg aggatgccgg acccgagccg tggcgcaatt tcgtcccgga gtggcagagg
      721 ttttatggtg accgcaatgc cgtcaatctt ggtttcaaag gcgatacgac ggcgagtttg
      781 ctgtggcgga tacggaacgg cgaaactgat ggcattacgc cgaaagtcgc ggtgattttg
      841 attggggcga acaatctcgg ccggctgcat tggtcggcgg cggacagttt gctcgggatc
      901 gacacgatca ttgccgattt gcatcggcgc ctgccggcga cacggatcct gctgctgagt
      961 gtattgccgt cggaacgatc ggactggacg acgcaaacca cggtggcgat caaccgcgca
     1021 ctggcggaaa agtatgcgca cgatccggtg gtcacattcg ttgatgtgac tacgattttc
     1081 atgaaggatg ggcggttgaa caaggatttg tatctggatc caaaactcaa accgccggac
     1141 cctccgttgc atccgaccgc gcagggccag gcgctgatgt cggcggcaat ggaaccagtc
     1201 ctggcaggac ttctgggcga caagccgcat caataacggg agagcagcat ggcgaaagga
     1261 tattggatcg cgcgggtcga tgtgacggat ccggacggct accaggcgta tgtcaaagcc
     1321 aacgcagcgg cgttcagcaa gtttggcgcc aggttcatta tccggggcgg tcagttcgcg
     1381 gcgcccgaag gcacgccgcg tgcccggaac atcgtgctgg agttcgccga ttacgcgacg
     1441 gcggtggcat gttatcattc cccggagtat caggcggcga aagcattgcg cataggcaag
     1501 ggtgttgcgg acattgtgat cattgagggc tacgatggtg ttcaaccgta gaggggcatt
     1561 tttcccttgc gtttagtccg gcagtgccgt atatgaattg ccgaagccgg ggcagcccgg
     1621 ttaatcaatt ctaaggattt cgaccctaaa tctggccgcc catcaccaat ccacgggcag
     1681 gccatgctgc aaacagtcat cgagactccg gatttcatcc gcgatgcgga gcgtgccggt
     1741 ctgtcggccg aggagcgggg caaaatcgta gcactgatag ccgccttgcc aaaatcgggg
     1801 gcagacattc caggcaccgg tggcgcgcgg aaaatccgct tcgcgggacg cggcaaaggc
     1861 aaaagcggag gttaccgggt gatctcgttc tacgccggcc cggatgtgcc ggtgttcctg
     1921 ctgaacgtct ttgcaaaagg cgacaaaatt gacctgacca tggccgaacg taacgaactg
     1981 cgcaaggaac tggctgggct ggctgatgat tatcgagatg gagtacgccg tcatgtccaa
     2041 ggctggtagc cgcattctca acagcgttcg cgccgcacgc gcatttgctc gcagtgactc
     2101 ggatggcggg ttcgtcgtgc atgtgcccga caacgtcgac gtccgcagca tccgcgccga
     2161 tcttggcttg agccaggaag ccttcgccaa tcgctttggc tt
//
LOCUS       DATAVD010001046         3233 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1030023, whole genome shotgun sequence.
ACCESSION   DATAVD010001046 DATAVD010000000
VERSION     DATAVD010001046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3233
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1030023"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..436
                     /locus_tag="VHX39_19915"
     CDS             <1..436
                     /locus_tag="VHX39_19915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993447.1"
                     /translation="IADFRMNAPHIRVSVVMPGHIGTGIRDNSLKVQGHTDADGLNAA
                     QIAQIRARLISMGRDPSKYSDADIEKMHTERARRFVTDAPTSAAEAAKIILDGVRADR
                     LRILVGPDAQVIDRMVRQDPDHAYEPEFYERFATEAGWYSGR"
     gene            complement(691..2331)
                     /locus_tag="VHX39_19920"
     CDS             complement(691..2331)
                     /locus_tag="VHX39_19920"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3993448.1"
                     /translation="MNDRVEIAREPSAKVATDFDAIVIGAGVSGLYQLYRLRELGLTT
                     RVFEAGSGVGGTWYWNRYPGARFDSESWTYGYSFSQELLDEWDWDEHFAGQPETERYL
                     NHVADKFDLRRDIQFKTIVTAAHYQEDSRSWKVTLDNGTSCTARFLITAVGVLSASVL
                     PRIPGIESFKGQSCHTHNWPKEPVSFAGKRVAVIGTGATGIQAITEIAKTAGHLTVFQ
                     RTAQWSAPLHNARVTPEEMREIRKNYADIFARCQETVGCFIHAADPRSVFEVTEEERE
                     AFWEQRYGEPGFGIWMGNFRDVLTDREANKLMSNYLARKIRERVKDPVVAEKLVPKTH
                     GFGTRRVPLESGYFEVYNQPNVKLVDLTETPIERIMPEGIRTSDADYQFDMIIYATGF
                     DAITGAFDQIDIRGVGGVSLKDKWADGPVTLLGILVDGFPNFMMVMGPHAGLGNFPRA
                     VEYTSDWATALIRHARDNGFTRVDATPEAAKAWTDHVIATNEGLLFTEVDSWMTGINR
                     NLEGKQVRRVMRYSGGHPAFRERCDTVSTGGYRELSMA"
     gene            complement(2663..>3233)
                     /locus_tag="VHX39_19925"
     CDS             complement(2663..>3233)
                     /locus_tag="VHX39_19925"
                     /inference="COORDINATES: protein motif:HMM:NF041278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CmcJ/NvfI family oxidoreductase"
                     /protein_id="HEX3993449.1"
                     /translation="VYNHDVFDKDYAGDRTEDQDNKNPGVNANYAMLVHNDLNDNSGR
                     VRCRELLTKNLRNFGRTQNYTEEEADAKMSRRFMSLNLAKPIEPVEQFPFVLCAWPSF
                     ADQPYINNYRLYDDRVGETTRFTYRPNHEWYWFPQQKPNEVSMLKCYDSVADGSVSRW
                     SFHSACIDPTAPANARCRKNVVVRSFVFF"
BASE COUNT          573 a         1013 c         1024 g          623 t
ORIGIN      
        1 gatcgccgat ttccggatga acgcgccgca catcagggta tccgtcgtca tgccgggcca
       61 tatcggcacg ggcattcgcg acaactcgct caaggtgcaa ggccataccg acgcggatgg
      121 gctgaacgcc gcacagatcg cgcagatccg tgcacggctc atctcaatgg gtcgggaccc
      181 gtcaaaatac tccgacgccg acatcgagaa gatgcacacc gaacgcgctc ggcgttttgt
      241 cactgatgcg ccaaccagcg cggccgaggc ggcgaagatc attctggacg gtgtcagggc
      301 cgaccggctc cgcattctgg tcgggcccga cgcgcaggtt atcgaccgca tggtgcgcca
      361 ggaccccgac cacgcctatg aaccggaatt ctacgagcgt ttcgccactg aagcgggctg
      421 gtattccggc cgctgacggt ggcgccatgg atcggaacga ggcggcctca ccttcggaag
      481 cggtattcga acccggtcag cacaccccag atgaaccggt tgccatcctc ggagcgtgga
      541 aagatggctg aatcgcactt tcggttccgc tgctacggga accccgggta tggggccacc
      601 gcctcgcccc cggcggtggc gacctcacca gccccgccgg gcggatgacc acgcaggtca
      661 tcaccgcgac ggccgccgcc ggtctgaccg ctacgccatc gacagttccc ggtagccccc
      721 tgtcgaaacc gtgtcgcagc gttcgcggaa tgccggatgg ccgccgctgt agcgcataac
      781 ccggcggacc tgtttgccct ccaggttgcg gttgatgccg gtcatccagg aatcgacctc
      841 ggtaaacagc agcccctcgt tggttgcgat aacgtgatcg gtccaggctt tcgcggcctc
      901 gggcgtcgca tccacgcggg tgaagccgtt gtcgcgcgcg tggcggatca gcgcggtggc
      961 ccagtcggag gtgtattcca cggcccgtgg gaagttgccg aggccggcgt gcggccccat
     1021 caccatcatg aaattcggga acccgtcaac cagaatgccc agcagcgtca ccggcccgtc
     1081 ggcccatttg tccttcagcg acacgccgcc cacacccctg atgtcgatct ggtcgaacgc
     1141 gccggtgatt gcgtcgaatc cggtcgcgta gatgatcatg tcgaactggt aatcggcgtc
     1201 cgaggtgcgg ataccctccg gcatgatgcg ctcgatcggc gtttcggtca gatcgaccag
     1261 cttcacattc ggctgattgt aaacctcgaa atagccgctt tccaggggca cccgccgtgt
     1321 cccgaagcca tgcgtcttgg ggaccagctt ttccgcgacc accggatcct tgacgcgctc
     1381 acggatcttc cgagcgagat aattcgacat cagtttgttg gcctcgcgat cggtcaggac
     1441 gtcgcgaaaa ttgcccatcc agattccgaa acccggttcg ccatagcgct gttcccagaa
     1501 cgcctcgcgt tcttcttccg tcacctcgaa caccgaacgg gggtcggcag cgtggatgaa
     1561 gcagccgacg gtttcctggc agcgggcgaa gatatcagcg tagttcttgc ggatttcccg
     1621 catttcctcg ggcgtgaccc tggcgttgtg caacggcgcc gaccattgcg cggtgcgctg
     1681 gaacacggtc aggtggcctg cggtcttggc gatttccgtg atggcctgga taccggtggc
     1741 gccggtgccg atcacagcca cccgcttgcc ggcaaaactg accggttcct tgggccagtt
     1801 atgcgtatgg caggactggc ccttgaagct ctcgattccg ggaatgcgcg gcagaacaga
     1861 cgctgacagc acgccgaccg cggtgatcag gaaccgcgcg gtgcaagacg tgccgttatc
     1921 gagcgtgacc ttccagcttc ggctgtcttc ctggtaatgc gccgcggtaa cgatggtctt
     1981 gaactggatg tcgcgccgga ggtcgaactt gtcggcgaca tggttcagat agcgctcggt
     2041 ttccggctgg ccggcgaaat gctcgtccca gtcccattcg tcgagcagtt cctgggaaaa
     2101 ggagtagccg taggtccagc tttcggagtc aaaccgggcc ccgggataac ggttccagta
     2161 ccaggtgccg cctacgccgg agccggcctc gaacacccgc gtcgtcaggc cgagttcgcg
     2221 caggcggtag agttgataca gtcctgaaac cccggcgccg atgacgatcg cgtcgaaatc
     2281 ggtggccacc ttcgcggacg gctcgcgcgc gatttccact ctgtcgttca tgggctcttt
     2341 ctcccttaat aagcctttcg gtccctttgg acggttgagc cggtccgctg tttcacgtgg
     2401 gatcgggcgg ccggcggttc ctggacctcg gggcaggata acgtggatcg tcacctctcc
     2461 gccagccacc gcttcggcgc accgttgcga ggaatggtgc gcccggcggc cggcgcacag
     2521 ggatccgacc ggtgccggcc gccgcgtcct cccgcctcgc tagggcatga tcgccctggg
     2581 cggaacgcca acagggcgtg aatcatgcga tcaaacaaag gcatagagcg ctttcaccct
     2641 gcacagtcag gatgaaggcg ctctaaaaga agacgaagga ccggaccacg acattcttgc
     2701 ggcaccttgc gttggcgggc gcggtcggat cgatgcaggc cgaatgaaac gaccagcgcg
     2761 agacggaacc atcagccacc gagtcatagc acttcagcat cgagacttcg ttgggcttct
     2821 gctggggaaa ccagtaccat tcgtggttag gccggtaggt gaagcgggtg gtttcgccaa
     2881 cgcggtcgtc gtagagccgg tagttgttga tgtacggctg gtcggcgaag gagggccagg
     2941 cgcagagcac gaagggaaac tgctcgaccg gctctatcgg cttggcgaga ttgagtgaca
     3001 tgaatcgccg cgacatcttc gcgtcggcct cttcctcggt gtagttctgc gtgcgcccga
     3061 agttccgcag gttcttcgtg agcagctcgc ggcagcgcac gcggccgctg ttgtcgttga
     3121 ggtcgttgtg cacgagcatg gcgtaattgg cgttcacgcc cgggttctta ttgtcctggt
     3181 cctccgtgcg gtcgccggca tagtccttgt cgaagacgtc gtgattgtag acc
//
LOCUS       DATAVD010001047         5682 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2521824, whole genome shotgun sequence.
ACCESSION   DATAVD010001047 DATAVD010000000
VERSION     DATAVD010001047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5682
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2521824"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..687)
                     /locus_tag="VHX39_19930"
     CDS             complement(<1..687)
                     /locus_tag="VHX39_19930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX3993450.1"
                     /translation="MTQPYRTPSGGRIRRDQPIRFSFDGRQYNGYAGDTLASALLANG
                     VHLVGRSFKYHRPRGILSAGSEEPNALVTIDRGDGRSTPNQRATTIELYEGLTARTQN
                     AWPSVRFDLGAVADFLSPLLSAGFYYKTFMWPAPFWQRLYEPAIRAAAGLGWAPTEPD
                     PDRYLHHYAHCDLLVIGAGPGGLAAAAAAAASQQRVILCDEQPAPGGSLWSCPATHID
                     GMAAPDWIAAA"
     gene            complement(684..956)
                     /locus_tag="VHX39_19935"
     CDS             complement(684..956)
                     /locus_tag="VHX39_19935"
                     /inference="COORDINATES: protein motif:HMM:TIGR01374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sarcosine oxidase subunit delta"
                     /protein_id="HEX3993451.1"
                     /translation="MLLIPCPWCGPRPEIEFRHGGQAHMTRPADPRLVSDTEWAGFLY
                     FRENPKGMHAERWRHIHGCGRFFNCVRDTVSDQIATTYKPGESRSE"
     gene            complement(956..2212)
                     /locus_tag="VHX39_19940"
     CDS             complement(956..2212)
                     /locus_tag="VHX39_19940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006698400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008115 - sarcosine oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0046653 - tetrahydrofolate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sarcosine oxidase subunit beta family protein"
                     /protein_id="HEX3993452.1"
                     /translation="MVGSTHFSAWSLLRHAFGGAWLEQWRSPELRDTYDVVIVGAGGH
                     GLATAYYLAAQHAVRNIAVLDKGWLGGGNTGRNTTIIRSNYLWDESAAIYEHALKLWE
                     GLSRVLNYNVMYSSRGVMMLAHNLHDVQVFRRHVFANELQGIDNEWLTPEQAQAFCPP
                     LDVSPSVRFPVLGAALQRRGGVARHDAVAWGYARAASALGVDIVQNCEVIGIDRGADG
                     TVTGLQTTRGPIRCRKIGVVAAGHTSVLMAMAGVRMPLESFPLQALASEPVKPVMPCV
                     VMSNTIHAYISQSDKGELVIGAGTDAYTSYSQAGGLHIASNTLEAICELFPTFRRLRM
                     LRNWGGIVDCTPDRSPIIGLTPVPGLFVNCGWGTGGFKATPGSGHVFAATIARSEPHP
                     IAAPFSLDRFRTGHLIDEAAAAAVSH"
     gene            2284..3456
                     /locus_tag="VHX39_19945"
     CDS             2284..3456
                     /locus_tag="VHX39_19945"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3993453.1"
                     /translation="MADFDYIIIGAGSAGCVLANRLTEDRNARVLLLEAGPPDKSMWI
                     NIPAGFTKLLNSPVYNWNFATEPEPNANNRSIPIPRGRTLGGSSSINGMLYVRGNQLD
                     YNTWAQFGNRGWSYESVLPYFKKAEHFEPGGDDSRGTDGPLHVTNMVERAELLDAFID
                     AAAAEGFPRNKDYNNGHQEGFGYYQVTQKNGERWSTARGFLKPAMNRPNLRVETNAYT
                     TKVILDGTRAVGVAYTQHGVAKEARCDREVILAAGAVKSPHILELSGIGQPELLGSLG
                     IPVLHALPGVGENYRDHYAPRMNWRVKLPVTLNERSRGLALASEVLKYYLQRRGILTY
                     TAGIAYGFVKTQADMEEPDVQFHFAHASYGNAQTRELEREPGMTLTVYQCRPESKG"
     gene            3457..3900
                     /locus_tag="VHX39_19950"
     CDS             3457..3900
                     /locus_tag="VHX39_19950"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HEX3993454.1"
                     /translation="MHAKTSDPNAAPAIRPNYLADPMDQRVLVDGMKIGRRIINNAVL
                     DKYRAFEMNPGDKVQTDAEWMEFARANGQTTYHVIGTCKMGNDPLAVVDDQLRVHGIA
                     GLRVIDASIMPTVTSGNTNAGVIMIAEKGADMIKATGRQDLRAAA"
     gene            complement(3949..4680)
                     /locus_tag="VHX39_19955"
     CDS             complement(3949..4680)
                     /locus_tag="VHX39_19955"
                     /inference="COORDINATES: protein motif:HMM:NF025724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4410 domain-containing protein"
                     /protein_id="HEX3993455.1"
                     /translation="MRKIHAALIVFAMLTLTACNHARVQTQEAYMGPQTARPDRILVG
                     YFAISPEQVRLDQGIGARIIRVAGDQPPSVLEQQAARATQVALAGRLVEDLRKYGLPA
                     EYTSSAAVPGTSLLVTGQIVTIDQGNRSRRILIGLGAGKSSVSADMQLYYQVPGQAPR
                     FMNAFQGQADSGHMPGAAETMGVGAAAGTLAGSAAVSGAMHMGAESRTAPDTSEAGRL
                     ADGLARQIGEFAVSMGWIAPAALAR"
     gene            complement(4836..>5682)
                     /locus_tag="VHX39_19960"
     CDS             complement(4836..>5682)
                     /locus_tag="VHX39_19960"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3993456.1"
                     /translation="DAYMLGIEPATQRPRMLEAMDAIMRLLKCEEPVTMKTDWFEMNQ
                     ARLHLAPYSDPHFEIAVASTITPFGMIAAGTHGVGVLSIGAGLPGGPEAMATQWKIAE
                     DYAAKNGKTMSRKNWRIVVSAHIAEDDEQALREVSRGERIETLTYFEDTLGRPPGRAD
                     DPLREGVKMGTTLVGSPETVIKGIHRLLGYSQGGFGGILFRAHEWATREQTLRSFELF
                     ARYVMPVFQASLDPIAASNNWARENRKQVFGPTVEAVKRAFTDFGAAVPEDAIRARTI
                     GGRDL"
BASE COUNT         1157 a         1813 c         1649 g         1063 t
ORIGIN      
        1 cgcagccgct atccaatccg gtgctgccat gccatcgatg tgcgtggcag gacatgacca
       61 taacgaacca cccggcgccg gctgttcgtc gcaaaggatc acacgctgtt gacttgccgc
      121 agccgcggcg gccgccgcca gtcctccggg accggcaccg atcaccagca gatcgcaatg
      181 cgcgtaatga tggaggtatc gatcggggtc cggttctgtc ggcgcccagc ccagaccagc
      241 cgcagcacgg atcgcgggct cgtagagtcg ttgccaaaac ggtgcgggcc acatgaaggt
      301 cttgtagtag aatcccgcag acagcagcgg tgacaggaaa tcggcaaccg cccccaggtc
      361 gaaccgcacc gatggccacg cgttttgggt tcgtgcggtc aggccctcgt aaagttcgat
      421 tgtggttgcg cgttggttag gtgtggaacg tccatccccc cggtcgatcg tgacaagagc
      481 gttcggttcc tccgagcctg cggacaggat cccgcgtggc cggtgatact tgaatgatcg
      541 gccaacgagg tggacaccgt tcgccagcag cgccgaggcc aacgtatcgc cggcataacc
      601 gttgtactgc cggccgtcga agctgaaccg gatcggctgg tcacggcgga tgcgtccgcc
      661 tgatggcgtg cggtagggtt gagtcattcc gaccgtgatt cgccgggctt ataagttgtc
      721 gcgatctggt cgctcaccgt gtctcgcaca caattgaaga agcggccgca gccgtgaatg
      781 tgccgccagc gttctgcgtg catgcccttc ggattttccc gaaaatacaa gaagccggcc
      841 cattctgtgt ccgaaaccaa ccgcggatcg gcaggccgtg tcatatgcgc ctggccaccg
      901 tgacggaact caatctccgg cctgggtcca caccacgggc atggtatcag caacatcagt
      961 gtgacaccgc tgcggcggca gcttcatcga tcaggtgacc agtgcggaat cgatccaaac
     1021 taaatggcgc agcaatcggg tgaggctcac tgcgcgcaat cgtcgcagca aacacatgac
     1081 ccgacccggg cgtcgctttg aagcctccgg ttccccaacc acaattgacg aacagacctg
     1141 gcaccggagt cagtccgatg attggcgacc ggtccggtgt gcaatccacg atgccacccc
     1201 agttgcgcaa catgcgcaga cggcgaaacg ttggaaacag ttcgcagatc gcctccagag
     1261 tattggatgc gatatgcagc ccaccggcct ggctgtacga cgtgtaagca tccgtgccgg
     1321 caccgatgac cagctcgccc ttatcggatt gggaaatata cgcgtggatc gtattcgaca
     1381 tgaccacgca gggcatcacc ggtttcaccg gctcggacgc caaagcctgc aacgggaacg
     1441 actccagcgg catgcggact cctgccatcg ccatcaacac gctggtgtgg cccgcggcaa
     1501 ccacgccaat ctttcggcaa cggatcggcc cgcgcgtggt ctgcaggcct gtcaccgtac
     1561 cgtctgcacc acgatcgatg ccgatgacct cacaattttg cacaatgtcg acacccagag
     1621 cgctcgccgc ccgcgcgtaa ccccaggcaa ccgcgtcatg ccgcgccacc ccgccgcgtc
     1681 gttgcaatgc tgcgcccagt accggaaatc gcaccgatgg gcttacatcc agcggtggac
     1741 aaaacgcctg cgcctgctcg ggcgtcagcc attcattgtc aataccctgc agctcgttgg
     1801 cgaacacgtg gcggcggaac acctgaacgt cgtgaagatt atgcgccaac atcatcacgc
     1861 cgcgcgacga atacatcaca ttataattta gcacgcgcga caggccttcc cacagcttca
     1921 acgcatgctc ataaatcgcc gcgctttcgt cccacagata attcgagcgg atgatcgtgg
     1981 tgttgcgccc ggtgttgcca ccacccaacc atcccttgtc cagcacggcg atattgcgga
     2041 ctgcatgctg agcagccagg tagtacgccg tcgccaaccc atgaccgccg gcaccgacga
     2101 tcacgacatc gtaagtatca cgcagttccg gagagcgcca ttgttccagc cacgcgccgc
     2161 caaaggcatg tcgcagcagc gaccaggcag agaaatgcgt cgaacctacc atgcgacaat
     2221 tgtctccgcc tggacgccgc ggcgcaagct ggctatgcaa cggtcggatc aaggggaacc
     2281 tccatggctg actttgacta catcatcatc ggtgccggtt ctgccggatg cgtgctggcg
     2341 aaccgtctga cggaagaccg caacgctcgc gtgctgttgc tggaagccgg ccctcccgat
     2401 aaatcgatgt ggatcaatat cccggcggga ttcaccaaac tgttgaacag cccggtctac
     2461 aactggaatt ttgcaaccga gcccgagcct aacgccaaca atcgcagcat ccccattccg
     2521 cgcggccgta ctctcggcgg ttccagttcg atcaacggca tgctctatgt ccgcggcaac
     2581 cagctcgact acaatacctg ggcgcaattc ggcaatcgcg gctggtctta tgaatcggtg
     2641 ctgccctatt tcaagaaggc ggaacatttc gagccgggag gcgacgactc tcgcggcacc
     2701 gatgggccgc tgcacgtcac taacatggtt gagcgcgctg aactgctgga cgcattcatc
     2761 gatgccgctg cggcggaagg tttcccgcgt aacaaagatt acaacaacgg ccatcaggaa
     2821 ggcttcggct attaccaggt cacgcaaaag aacggcgagc gctggtcgac cgcgcgcggt
     2881 ttcctcaagc ccgccatgaa ccgccctaac ctgcgggttg aaaccaacgc ctacacgacg
     2941 aaagtcattc tcgacggcac gcgcgcggtc ggcgttgcgt acacgcagca cggagtggca
     3001 aaagaggcgc gctgcgaccg ggaagtgatc cttgctgccg gtgctgtgaa gtcgccgcat
     3061 atcctggaat tgtccggcat tggtcaaccg gaattgcttg gctctctggg cattccggta
     3121 ttgcacgcgc tgccgggcgt cggcgagaat tatcgcgacc actatgcgcc tcggatgaac
     3181 tggcgggtga agttgcctgt gacgttgaat gaacgctcgc gcggcctcgc cttggccagt
     3241 gaggtgttga aatactatct gcagcgccgc ggcattctca catacaccgc cgggatcgct
     3301 tacgggttcg tcaaaacgca ggccgacatg gaagaacccg atgtgcagtt ccatttcgcc
     3361 catgccagtt atgggaacgc gcaaacccgc gagctggaac gcgagcccgg catgacgctg
     3421 accgtgtatc aatgccgccc ggaatcgaaa ggctagattc atgcaaaaac cagcgacccg
     3481 aacgccgctc cggcgatccg gccgaattac cttgccgatc cgatggatca gcgcgtgctg
     3541 gtcgacggaa tgaaaatcgg ccgccgaatc atcaacaacg cagtactgga caaatatcgt
     3601 gcgttcgaaa tgaaccccgg cgacaaggtg cagaccgacg cagaatggat ggaattcgca
     3661 cgcgccaatg gccagacgac atatcatgtc attggcactt gcaagatggg caatgacccc
     3721 ctggccgtgg tcgacgatca attacgggtg catgggatcg ccggtttgcg agtgatcgat
     3781 gcgtcgatca tgccgactgt gacgtcgggg aataccaacg ccggcgtcat tatgatagcc
     3841 gaaaaaggcg ccgatatgat caaggcgact gggcgacagg atttgcgcgc cgccgcctga
     3901 cgggccacgc cggcacccaa tcgcatctca ccggcaaagc tacagccgtt atcgtgcaag
     3961 cgcggcgggt gcgatccaac ccatcgacac cgcgaattcg ccaatctgcc ttgcgagccc
     4021 atcggcgaga cggccggcct cacttgtatc gggagcggtg cggctttccg cgcccatgtg
     4081 catcgcgcca ctgactgcag cggaacctgc caacgttccg gctgctgcgc caacgcccat
     4141 ggtctcggcc gcacccggca tgtggccgct gtcagcctgt ccctgaaatg cgttcatgaa
     4201 cctgggagcc tggcctggca cctggtaata taactgcatg tcggcactga cgctgctttt
     4261 gccggctccc agaccgatca ggatacggcg gctgcggttt ccctggtcga tcgtgacaat
     4321 ctggccggtt accagcaagc ttgtgccggg caccgcggcg gatgacgtgt attcggccgg
     4381 cagcccatat tttctcaggt cttcgacaag gcgaccggcc aacgccacct gggtggcccg
     4441 tgccgcctgc tgttccagga ctgacggtgg ctgatcgccc gcgacccgga ttatccgcgc
     4501 cccgatcccc tgatcgagcc tcacctgttc gggcgagata gcaaaatacc cgaccagaat
     4561 tcggtcgggc cgagcggttt gcgggcccat ataggcctct tgggtctgca cccgcgcatg
     4621 gttgcatgct gtcaacgtca gcatcgcgaa cacgatcaac gccgcgtgga tcttgcgcat
     4681 cgcccagagc tcccccaatg gccattatgg cccgctgcat cgcgcgcggg cctccacttg
     4741 tctgggttgt ttaagcctcg cttcgggtgc gaaagcaata cgaccggaga acgtcactct
     4801 cggcgacgct catccggtca gtagcgtaga agagcttaca ggtccctccc cccgatggtc
     4861 cgggcgcgaa tggcgtcttc cggtaccgca gcgccgaaat cggtgaaggc gcgtttcact
     4921 gcctcgacgg tcggaccaaa cacctgcttg cggttttcac gcgcccagtt gttggaggcg
     4981 gcgatgggat cgagcgaggc ctggaagacg ggcatcacgt aacgggcgaa cagttcgaaa
     5041 ctgcgcaacg tctgctcgcg ggtcgcccat tcgtgggcgc ggaacagaat gccgccgaag
     5101 ccaccttggc tgtagcccaa cagccggtgg atccccttga tcacggtttc cggtgaacct
     5161 accagtgtcg tccccatctt caccccctcg cgcagaggat cgtcagcacg cccaggcgga
     5221 cgaccgaggg tatcttcaaa gtacgtcaga gtttcgatcc gttcgcctcg gctgacttcg
     5281 cgcaaggcct gttcgtcatc ctcggcaata tgcgcgctca ccacgatgcg ccagttcttg
     5341 cggctcatcg tcttgccgtt ttttgcagcg tagtcctcgg cgatcttcca ttgcgtcgcc
     5401 atcgcctccg gaccgcccgg caggccagca ccaatcgaca atacgccaac gccatgagtg
     5461 ccggccgcga tcatgccgaa cggcgtgatc gtgctggcaa ccgcaatctc gaaatgcgga
     5521 tcgctatatg gcgcgaggtg caaacgcgcc tgattcattt cgaaccaatc agtcttcatg
     5581 gtgaccggct cttcgcattt caacaatcgc atgatggcgt ccatagcctc cagcatgcgc
     5641 ggccgttgcg ttgcaggctc gatgccaagc atgtaggcgt cc
//
LOCUS       DATAVD010001048         2231 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2706481, whole genome shotgun sequence.
ACCESSION   DATAVD010001048 DATAVD010000000
VERSION     DATAVD010001048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2231
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2706481"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..1291
                     /locus_tag="VHX39_19965"
     CDS             113..1291
                     /locus_tag="VHX39_19965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3993457.1"
                     /translation="MNKNVWLLFACQALMNAVMSGQTIMASLIGYKMVGTIGLNTLPM
                     AIQQIGVMCASVPAAMVFARYGRKAGFWMGCTIAMCGSMTFAAGVYTGNFPLYVFGAF
                     PAGLGFGISQHLRFAAAEVASAEARPRAISLVLAGGVLAAIIGPEMVKRTYDFLPAHP
                     FLATYLYLPLLPILTVILLTFTALPPAPPRVSVPVPFRTIIARPTFLTAVVASMVGYG
                     TMNLVMASTPLQMLLCGFGVGASADVIRAHSLAMFLPGFITGRLIQKFGVHRIIAIGG
                     VLTLGCVAVNLEFAPYFATFLVALSLLGVGWNFMFVGGSSLLTTAYDPTERVRVQGLH
                     DFIVFASVACTAVSSGAIHMRAGWTVLNLTLVPPVAFALAVITWHWLARRRQLMVVAE
                     "
     gene            complement(1475..1702)
                     /locus_tag="VHX39_19970"
     CDS             complement(1475..1702)
                     /locus_tag="VHX39_19970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993458.1"
                     /translation="MRIVLIAGLVLGAASMSLVRTANAADPNWHKPFLVEGQNHTAFQ
                     EPDQQNPDWLQEPCLNDRHGNEICRHQSAPE"
     gene            1857..>2231
                     /locus_tag="VHX39_19975"
     CDS             1857..>2231
                     /locus_tag="VHX39_19975"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: protein motif:HMM:NF015319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEX3993459.1"
                     /translation="MRQFSDIFAQTAARKGGGAVLESILAETPSRTPAEIAATPDHRI
                     LAEMTRRIFYAGFSWKVVDDKWPAFEQGFFGFDPTACAFMTEAQFDTLMQDRGIVRNG
                     AKIKAVQINAQFLLDCKTGHDSA"
BASE COUNT          371 a          660 c          720 g          480 t
ORIGIN      
        1 tgctctgaca aaggggggct ggagccattt ttagcgtgac gcccggcccg cacggccgac
       61 gcgttccaac gagcacctga ggcacgtcca acccccaagg catggccaac caatgaacaa
      121 gaatgtctgg ctgttgttcg cctgtcaggc gctgatgaat gccgtaatgt cggggcagac
      181 gatcatggcc tcgctgatcg gctacaagat ggtcggcacc atcgggctga acacgctgcc
      241 gatggcaatc cagcagatcg gcgtgatgtg cgcctcggtg ccggcggcga tggtgttcgc
      301 tcgctacggg cgcaaggccg ggttctggat gggctgcacg atcgcgatgt gcggcagcat
      361 gacgtttgcg gccggagtct ataccggcaa cttcccgttg tacgtgttcg gtgcctttcc
      421 cgccggcctg ggctttggca tctcgcagca cctgcgcttt gccgctgccg aagttgcctc
      481 ggctgaggca cggccgcgcg cgatctccct ggtgctggcc ggcggcgtgc tggcagcgat
      541 cattgggccg gaaatggtga agcgcacgta cgacttcctg ccggcgcacc cgttcctggc
      601 aacctatttg tatctgccgc tgctgccgat cctgacggtg atcctgctga cgttcacggc
      661 gttgccgccg gcgccgcctc gggtcagcgt gccggtgccg ttccgcacca tcatcgcgcg
      721 gccgacgttt ctgacggcgg tggtggcgtc gatggttggg tacgggacga tgaacctggt
      781 tatggcctcg acaccattgc agatgctgct gtgcgggttt ggcgtggggg cgagcgcgga
      841 tgtgatccgg gcgcactcgc tggcgatgtt tctgcccggg ttcatcacgg gccggctgat
      901 ccagaagttc ggcgtgcacc ggatcatcgc catcggcggc gtcctcaccc tgggctgcgt
      961 tgcagtgaac ctggagttcg cgccgtattt cgccacgttc ctcgttgcgc tctcattgct
     1021 gggcgttggc tggaacttca tgttcgttgg cgggtcgtcg ttgctgacaa ccgcatacga
     1081 tccaaccgag cgggtgcgtg tgcagggcct gcacgacttc atcgtgttcg ccagcgtggc
     1141 gtgcacggcg gtgtcgtcgg gcgcgatcca catgcgggcg gggtggacgg tgctgaattt
     1201 aacgcttgtg ccgccggtgg cgttcgcact ggcggtgatc acctggcatt ggctggcgcg
     1261 gcggcgtcag ctcatggtgg tggcggaatg aaaagcccgg gtatacctca gcgccggtcg
     1321 ccgccgtcac cccgcggtgg accgcgcaat tcacattttg ggcgatcgtt aagggctaat
     1381 tacgatttcg tatgaattgc gtcagtcgcg actgcggcgc gccaggggaa tccaagttaa
     1441 actgccctgt ctacactctt gtcttggtca ttggtcattc cggcgcagat tggtggcggc
     1501 agatttcatt gccatgccga tcattgaggc aaggctcttg caaccagtcc ggattttgct
     1561 ggtcgggctc ctggaacgcc gtatggttct gtccctccac caggaagggt ttgtgccaat
     1621 tggggtcagc agcatttgcc gtacggacca ggctcatgct cgccgcacca agcaccagac
     1681 cggctatcag gacgatcctc atttgtgact ccgaggttgt cggtcggaca acgcgcaatg
     1741 cgtaaggagg ttccgaaatg cgccggaacc tacgccaggt gcattgctcc tgcccgggta
     1801 attgtggtca gatttaccgt tctgctccac agccgtgaca gtgaggagat gcagtgatgc
     1861 ggcaattctc cgacattttc gcccagacag cggcacgcaa aggcggcggt gcggtgttgg
     1921 aaagtatcct ggccgagacg ccatcgcgca cgccagccga gatcgccgcc acgcctgatc
     1981 atcgcatcct cgccgaaatg acgcggcgaa ttttttacgc cgggttttcc tggaaagtgg
     2041 tcgacgacaa atggccagca ttcgagcaag gctttttcgg cttcgacccg accgcctgcg
     2101 ccttcatgac cgaggcgcag ttcgatacgc tgatgcagga tcgcggtatt gtgcgaaacg
     2161 gtgccaaaat caaagccgtc cagatcaacg cgcagttcct gcttgattgc aaaaccggcc
     2221 acgacagtgc c
//
LOCUS       DATAVD010001049         2236 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_472566, whole genome shotgun sequence.
ACCESSION   DATAVD010001049 DATAVD010000000
VERSION     DATAVD010001049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2236
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_472566"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..81
                     /locus_tag="VHX39_19980"
     CDS             <1..81
                     /locus_tag="VHX39_19980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007282649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX3993460.1"
                     /translation="TSRLVFIGRNLNRPQLRRGFESCVAD"
     gene            166..1212
                     /locus_tag="VHX39_19985"
     CDS             166..1212
                     /locus_tag="VHX39_19985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HEX3993461.1"
                     /translation="MSQTAEAAFLLKTRGTSRDLDAFVVAARFARDGRRVGFALGDGT
                     VHIAPVGGSGEGNTVSVHDGAILGFAPDPAGDGFISGGDDGKLRRVAGDGSVSDVASF
                     GGKWVEHVATFALDKGKGLIAASAGKIVRLFDQSGQLLKELTHPSTVTGLVFDGKGKR
                     IGASHYNGASLWFVAAKTDTPRKLEWKGSHTGILIHPEGEAVVTAMQENALHGWKLPN
                     GEHMRMSGYPAKTASLSFTRNGKWMASSGADAMVLWPFFGGGPMGKAPLELAGGDGII
                     CTQVACNPNNLVVAGGFADGLLVVADIDSSRILPVVPPELGPISALAWSPNGVLLAVG
                     TETGFTALIDFAKR"
     gene            1721..>2236
                     /locus_tag="VHX39_19990"
     CDS             1721..>2236
                     /locus_tag="VHX39_19990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993462.1"
                     /translation="MTTKTLPNSTTTTYYYNGSGVTLVNAGVQGRPGASGMNFGFVVA
                     GNNDTLINNGTVFGQRVGVYVTGSGDSVINAAGKNITATEAGQAGINFYNFSGTVTNY
                     GTISGFAGATQAYAGNAVEMRHGGLVTNFGTLLNGGALFRLNPGTLVNTGVILGNVAY
                     GGVYMEAGGTVT"
BASE COUNT          436 a          780 c          656 g          364 t
ORIGIN      
        1 accagccgcc tggtgttcat cggccgcaac ctgaaccgcc cgcaactgcg ccgcggcttc
       61 gaaagctgcg tggccgatta gaccctgagc cgcccatcct gccgaaaaag ggaacatccc
      121 ttctcgccgc aagatggcca agacgcgtag agaaacagga ctcgcatgag ccagaccgcc
      181 gaagccgcct tcctgctaaa gacccgcggc acgtcccgcg atctcgatgc gttcgtcgtc
      241 gctgcccgct tcgcccgtga cgggcggcgc gtcggcttcg ccctcggtga tggcaccgtg
      301 catatcgccc cggtgggcgg atccggcgaa gggaacaccg tcagcgtcca tgacggcgcg
      361 atcctcggct tcgcacccga ccccgccggc gacggcttca tctccggcgg cgatgacggc
      421 aagctgcgcc gcgtcgccgg tgacggcagc gtgtccgacg tggccagctt cggcgggaaa
      481 tgggtcgagc atgtcgccac cttcgccctc gacaagggca aggggctgat tgccgcgagc
      541 gccgggaaaa tcgtgcggct gttcgaccag tccgggcagt tgctgaagga actgacccat
      601 ccgtccaccg tcacaggcct ggtgttcgac ggcaagggca agcggatcgg cgcctcccac
      661 tacaacggcg cctcgctgtg gttcgtcgcc gccaagaccg acacgccgcg caagctggag
      721 tggaaaggca gccacaccgg catcctgatc cacccggaag gcgaggcggt cgtcaccgcg
      781 atgcaggaga acgccctgca cggctggaaa ctccccaacg gcgaacatat gcggatgagc
      841 ggctatcccg ccaagaccgc cagcctgtcg ttcacccgca acggcaaatg gatggccagc
      901 agcggcgccg acgcgatggt gctgtggccg ttcttcggcg gcggcccgat gggcaaggca
      961 ccgctggagc tcgccggcgg cgacggcatc atctgcaccc aggtcgcctg caacccgaac
     1021 aaccttgtcg tcgccggtgg tttcgccgac gggctgctgg tggtggcgga tatcgactcc
     1081 tcccgcatcc tgccggtggt gccgcccgaa ctcgggccga tcagcgccct ggcctggagc
     1141 ccgaacggcg tgctgctggc cgtcggcacc gaaaccggct tcaccgccct gatcgacttc
     1201 gccaaacgct gacgcgaccg gcgctcgacc gcgttttcct gggcatgttt gctattcgtt
     1261 cttgtcatca tgacaagaat aaaccaagaa caatcgaata gccgacttcc ggccagccga
     1321 gaatctcatg gcctgacgaa caaaacacgc caaatgcgat tccaaattgc taccaatggt
     1381 tgaatgtttt tgaaccatag tccatcatgc gagtatgcat tgccaccata ctctattttt
     1441 cgacagaatt tcagagcata gcggtctgat ctgccattcc aggattgcgg cacaagccgt
     1501 tatcacccgc ataacgttca tcgatgcacc ggccaacctg ccggcacccg aacccgcccg
     1561 cggcgacaga cgtgatttcc tcggtttacg ccatcgcacg cggcctggcg aacggcctga
     1621 tgatggccgg acggctgcca acgcggaacc acccacactg ccgggccgcc ctcggcccga
     1681 gccatgacaa cgccacccac aagacgggga acgccggtcc atgaccacca aaaccctgcc
     1741 caattcgacc accaccacct actactacaa cggatccggc gtcacgctgg tcaatgcggg
     1801 cgtccaaggt cggccgggcg ccagcggcat gaatttcggg ttcgtcgtcg ctggcaacaa
     1861 cgatacgctg atcaacaacg gcaccgtttt cggtcagcgc gtcggtgtct acgtcaccgg
     1921 ttccggtgac agtgtcatca acgcggcggg gaaaaacatc accgccaccg aagccggcca
     1981 ggccggcatc aatttctaca atttcagcgg caccgtcacc aactacggca ccatcagcgg
     2041 cttcgccggc gcaacccagg cctatgcggg caacgccgtc gagatgcggc atggcggcct
     2101 cgtcaccaac ttcggaacgc tgctgaacgg cggcgccctg ttccgcctca accccggcac
     2161 cctcgtcaac accggggtga tcctcggcaa tgtcgcttac ggcggcgtct atatggaggc
     2221 cggcggcacc gtcacc
//
LOCUS       DATAVD010001050         2679 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1590948, whole genome shotgun sequence.
ACCESSION   DATAVD010001050 DATAVD010000000
VERSION     DATAVD010001050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2679
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1590948"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1187)
                     /locus_tag="VHX39_19995"
     CDS             complement(<1..1187)
                     /locus_tag="VHX39_19995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase NADP-binding
                     domain-containing protein"
                     /protein_id="HEX3993463.1"
                     /translation="MATHVTFGGRLVILGFGSIGQGVLPLILRHIEMPRERIQIITAD
                     ARGAAIAAEYGVVQITQPITRANYRAVLGLMLGRGDFLLNLSVDVSSVALVQLCRERG
                     ALYLDTCVEPWAGGYTDPSLSASERTNYALRERALALVRPGANDPTAVMTHGANPGLV
                     SHFVKQALLNIAADTGLGAAVPRSRAEWARLAATLGVKVIHIAERDTQTVDRAKQRGE
                     FVNTWSIDGFIGEGNQPAELGWGTHEKVLPGDAQQHDFGSGAAIYLNRRGAATRVRSW
                     TPLEGPFHGFLITHNESISIADFFTEHENGTVKYRPTVHYAYHPCDDAVLSLHELAGK
                     NWRMQPAQRLLMHEITDGIDELGVLLMGHSRGAYWYGSRLSIDEARRLVPHNNATSLQ
                     VTAA"
     gene            complement(1218..2465)
                     /locus_tag="VHX39_20000"
     CDS             complement(1218..2465)
                     /locus_tag="VHX39_20000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III PLP-dependent enzyme"
                     /protein_id="HEX3993464.1"
                     /translation="MSNLRVRSAVSPPRRRLQDASAFDAIPAQIRSVDALIADLRPEE
                     PVHCIRPGVLTATAQDFVTAFPGDVLYAVKCNPDPAVLRALWAGGVRHFDCASPNEVL
                     LVRQMFPDAQIHLMHPIKARGAIREAWARHGVRDFVLDSAAELAKVVDETAATGVAGE
                     LGLIVRLALPKGAAVLDLSGKFGADGTEAVALLRAARSHAARLGVAFHVGSQCLDPLA
                     WRRALEVTGEVIAAADVAVDIVDVGGGFPVAYPDVEPPPLGAFIAEIEAGFERLGLPQ
                     SRLWTEPGRALVAGGGSVVVQVQARRDDTLYINDGVYGSLADAGALGFRYPVRCIRPH
                     GAPQRDAECGFRFFGPTCDSADVMRGPFFLPDDVGEGDWIEIGQLGAYGACLRTGFNG
                     FDRARIAEIFDAPLDSTDLHKAA"
BASE COUNT          552 a          877 c          819 g          431 t
ORIGIN      
        1 gcagcggtca cttgcaaaga ggtcgcgttg ttgtgcggca ccagccgccg tgcctcatcg
       61 atcgatagtc gcgaaccgta ccaataggca ccgcgcgagt gccccatcag cagcacgccc
      121 aactcgtcga ttccatcggt aatctcgtgc atcaacaacc gctgcgccgg ttgcatgcgc
      181 caattcttgc cggccagttc gtgcaacgac aacacggcgt cgtcgcacgg atggtatgca
      241 taatgcacgg ttggccggta tttcaccgtg ccattctcgt gctcggtgaa aaaatcggcg
      301 atcgagatcg actcgttatg ggtaatcagg aagccatgga atgggccctc aagcggagtc
      361 caactccgca cacgtgtcgc agcaccgcgg cggttcagat agattgccgc gccactgccg
      421 aaatcatgct gttgtgcgtc gcccggcagc actttctcat gcgtacccca acctagttca
      481 gcgggttggt tcccttcgcc gataaagccg tcgatcgacc aggtgttgac gaactcgccc
      541 cgttgtttgg cgcggtcgac cgtctgcgtg tcgcgttccg cgatgtggat aacctttacg
      601 cccaatgtgg cggcgagcct ggcccactcg gcgcgtgacc tcggaaccgc ggcacccagc
      661 cctgtgtcgg cggcgatatt cagcagcgcc tgcttgacga aatgcgacac aagacccgga
      721 ttggcaccat gagtcatcac cgcggtcgga tcgttggctc cggggcggac cagcgccagc
      781 gcgcgctctc gcaatgcata attggtgcgt tccgacgcgg acagcgacgg gtcggtgtaa
      841 ccgccggccc aaggctccac gcaggtgtca agatagagcg cgcctcgttc gcgacataac
      901 tggaccaatg ccacagacga cacatcgacc gacaaattca gcaggaagtc gccgcggccg
      961 agcatcaggc caagtaccgc ccgataattg gcacgcgtga tcggctgcgt aatttggacg
     1021 acgccgtatt ccgccgcgat cgccgcgccg cgcgcatcgg cggtgataat ttggatgcgt
     1081 tcccgcggca tttcgatatg gcgcaggatc agcggcaaaa caccctgacc gatactgcca
     1141 aagccgagta ttaccagccg gccgccaaac gtaacgtgcg tggccatcgt caatcctcct
     1201 tggcgcgaat ttggtggtca ggcggccttg tgcaggtccg tggaatcgag tggagcgtcg
     1261 aaaatttcag cgatacgggc gcggtcgaag ccgttgaatc cagtgcgcag gcaggcgcca
     1321 taagcaccca actgaccgat ctcgatccaa tcgccttcgc cgacatcgtc cggcaggaag
     1381 aacgggccgc gcatcacgtc agcgctgtcg caggttgggc cgaaaaaccg gaaaccgcac
     1441 tcagcatcgc gttgtggtgc gccgtgcgga cggatgcatc gcaccggata gcgaaatccc
     1501 agagcccctg cgtcggcaag actgccgtac accccatcgt tgatgtacag cgtgtcgtct
     1561 cggcgtgcct gaacctgcac cacaaccgag ccaccgcccg cgaccagcgc tcgcccaggc
     1621 tccgtccaca accgggactg aggcaggcca agccgttcga accctgcctc gatttcggcg
     1681 atgaacgcgc cgagcggcgg cggttccaca tcaggatagg cgaccgggaa gccgcccccg
     1741 acgtccacga tgtcgacggc gacatccgcc gcggcgatta cctcgccggt cacttccagc
     1801 gcgcggcgcc acgccagcgg atcaaggcac tgcgacccga catgaaacgc gacgccgagg
     1861 cgagcggcgt gtgaacgtgc agcacgcagc agcgccacgg cctcggttcc gtcggcgccg
     1921 aacttaccgg acaggtcaag cacagcagcg cccttgggca acgcgaggcg aacgatcaag
     1981 ccaagctcac cggcaacgcc ggttgccgct gtttcatcaa cgaccttggc aagttcagcc
     2041 gcgctatcga gcacgaagtc tcgcacgcca tgacgggccc aggcctcgcg gatcgcaccg
     2101 cgcgccttga tcggatgcat gaggtgaatc tgcgcatcgg gaaacatctg ccgcaccaac
     2161 agcacctcgt tcggcgaggc gcagtcgaaa tgccgcaccc cgccagccca tagtgcgcgc
     2221 aataccgccg gatcggggtt acatttcact gcataaagca cgtctccggg aaatgccgtg
     2281 acgaagtcct gcgccgtggc ggtgagcacc ccgggccgga tgcaatgcac cggctcctcg
     2341 ggccgcaagt cggcgatcaa cgcatcaacc gagcggatct gggctgggat cgcatcgaac
     2401 gcgcttgcat cctggagacg gcgacggggc ggcgagacgg cagaacggac acggaggttg
     2461 gacatcgcag taatcctcac agcagcgaac ggacacgccg aatgggcgcg cccgtggacc
     2521 attggggaaa cagagacacg cggacggagg cgcgatgcgc gttccggcag cgggctcagg
     2581 cgatgtgcgg acttcgctcc ggcacgaacg gatcagcaaa cataggctta tccctaacga
     2641 ccccggccca cgattggccg gaccagacga aaaggacgc
//
LOCUS       DATAVD010001051         6150 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3077037, whole genome shotgun sequence.
ACCESSION   DATAVD010001051 DATAVD010000000
VERSION     DATAVD010001051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6150
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3077037"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            142..414
                     /locus_tag="VHX39_20005"
     CDS             142..414
                     /locus_tag="VHX39_20005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993465.1"
                     /translation="MPGFANNPAPLPPTQMPPGVLCMMLIATLQFSWTLFVGPIRGAH
                     GWGLVDILWAFTIFIATEAWITPFAGYAVDYMGPRRGPRLMILLGV"
     gene            911..1561
                     /locus_tag="VHX39_20010"
     CDS             911..1561
                     /locus_tag="VHX39_20010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4286 family protein"
                     /protein_id="HEX3993466.1"
                     /translation="MAQKGRGIFMVYVDIDAQYVQEFNKWYNEEHLPELLSVPGILSA
                     ARYEAVKGGPRYLACYELESVAVMQTPAFTNRPRTPWGQKVSPSVIGKNLTRIVGEQI
                     YPEGVERPERGMAPVLQIGRMSVPAEVDAEWNAWYSGEYVPGYRKVPGVIYARRYRVL
                     EGTSGYSTVYEFASTAVPESPEWKEQQQHSSPNSSRMRQAMTHAPGSAGVYERVNR"
     gene            complement(1630..2598)
                     /locus_tag="VHX39_20015"
     CDS             complement(1630..2598)
                     /locus_tag="VHX39_20015"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3993467.1"
                     /translation="MICDVHAHYTPKNFSEFMGDRFASPTHLAVKRGLARHPFSDTQE
                     DIEARFRLMEDAGVGRQVLSPNHPPYLPDEAECVTAVKMLNDAYAEFARRYPDRISSY
                     VMLPLPHIDASLREMERGFDELGCVGVNMNIVCLGRSIAETEFEPLYAEMNRRGAVLF
                     VHPAGSAICSPFIIDYNYGGSVGTSLEDATFVLHMIAKQIPYRYPRIKFIVPHLGGPI
                     PMLMNRLDKQGQGPRGHPNLAEAPSVTARRFYYDTVCYGSKPAFLCALEAFGADHIVT
                     GSDYPVLQDWEVYRETFAFIERLGLPGEVTDKILHHNAQKLFGFDH"
     gene            3102..4898
                     /locus_tag="VHX39_20020"
     CDS             3102..4898
                     /locus_tag="VHX39_20020"
                     /inference="COORDINATES: protein motif:HMM:NF020037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX3993468.1"
                     /translation="MVLERIHEGSDGLVIGSANDAFCRISGHAVTDLVGRPFASLAAP
                     DSIPASWNAALAAAHDQKSFRSELLCGRPDGRTFWFGLHIMPTARGGPRFNVVLGRDI
                     TAARLDRQQQASVQGLLAKVFASVPTAVGILEEHGVIVMTNPALDSLLGFAPGGLVGK
                     GDVDQVAPEDRTALLAARQRQIESGLPYTIKFKALHADGSRIPVKFSSTLVEREDLKR
                     FRIVTVTPTAVDTDSPPVTVHIAGKIKLIGLEEVRAALGSRWPAVAERAMAVAEHVVK
                     RRCGPRDTWARTTDSGIVICFGETTEEEAALRATAIARDIRARLIGEGEEPGRAEVSA
                     VTSAVELVDENGRPVDTLAEALGRRLNARLAEFEQRARETLRVATQSVTCELAAIHDH
                     TIYRDIGHFATLPRRLEDRVCSALAVLPTAARGEFEFDRLVLGAAAEHVIQKIASGAP
                     PLILVPFDFDLFLDRQRMERYLATCRAVDARLRQHLILVLSNLPRGVPRSRVQECVMR
                     LRPLCQMVAFQSADIDCPAVEFSALNGSIVVLSETDMNRFDARSLAKLQKLIGLTRAQ
                     RARILVRQVGTTDAGRRLLKLGVNLIALANNP"
     gene            5508..>6150
                     /locus_tag="VHX39_20025"
     CDS             5508..>6150
                     /locus_tag="VHX39_20025"
                     /inference="COORDINATES: protein motif:HMM:NF015799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ANTAR domain-containing protein"
                     /protein_id="HEX3993469.1"
                     /translation="MRVLLADDDAERVRALTTVLSADPSLTILRPRPGELLADAVEAQ
                     TPDVVLVDMARPDRDALEGIRVVSANSPRPIVLFVDQDDPGFMEDAIRAGVSSYNVLG
                     VPPLDVKPILRAATAMFRQHQAARTELRQAEQRLREREIVDRAKAILIKQRHMTEPVA
                     YRWLRSRAMASGRRIFDIAQDLVAGRLVAHGDRARMSGNAISRDDTDVGNEARE"
BASE COUNT         1191 a         1782 c         1934 g         1243 t
ORIGIN      
        1 ttctgacctg atgcaatcct gccacgggcc ggaagtccat ggaagttccg caaaaccaaa
       61 atggcacgta ttccggcgtc gcgcctgccg ctacattgtg cagccgatct gaacaaaaca
      121 aagaactgtg agatgacacc gatgcccggg tttgcgaaca acccggcgcc attgccacca
      181 acccaaatgc cgccgggcgt cctttgcatg atgctcattg cgactttgca attctcctgg
      241 accctgttcg tgggaccgat ccgcggcgcg catggttggg gcctggtcga catcctgtgg
      301 gcgttcacca tcttcatcgc cacagaggcc tggatcaccc catttgccgg ttacgctgtc
      361 gattatatgg gaccgcggcg tggccccagg ctaatgatct tgctcggggt ataatggtcg
      421 gcctgggctg cgctatgaac gcctatgccg acagtctgat gctgctttac actggagcgg
      481 taatctccgg tctggcaagc ctggtcctgt actcacttgg tatcaaaccc ttataaacgg
      541 aagcgctttc gttgatactt aagcacatcg cttgcggact cgttggcgcc aggccgaagt
      601 ttcaacagca tgcagaaact gcctcggatt ccatttggct caatacgtta tcgactcaat
      661 atgaggctcg cattgaggta acgcgtgaat gcccatggca caccgataat gtgcagatcc
      721 acgaccgggt aatttgacaa tgccggggcc gtgggcattc cctcctcatg atgtttcatg
      781 tggcgccgtg tgctaagacg gcttccccgg ttggtgtctc gcgtctctcc cagggcccgg
      841 gcgtgaggac cgggtgccaa tgagaccagg caaaacgatg gcggcgacgc ttcacagagg
      901 agacggaaac atggcacaaa aaggtcgtgg aattttcatg gtgtacgttg atatcgacgc
      961 ccagtacgtg caggaattca acaaatggta caacgaggaa catctgcccg aattgctgtc
     1021 ggtgccgggt atcctttcag cggcccgcta cgaggcagtc aagggtggcc cacggtacct
     1081 ggcatgctat gaactggaaa gcgtggcagt gatgcagacg ccggcgttta ccaaccggcc
     1141 gcgaacgccg tggggacaga aagtctcgcc ttccgtgatc gggaagaatt tgacacgcat
     1201 tgtcggggaa cagatttacc cggagggcgt ggaaaggccg gagcgtggca tggcgccggt
     1261 gttgcagatt ggccgtatgt ccgtccccgc tgaggtcgat gccgagtgga acgcctggta
     1321 cagcggggaa tacgtgccag gctaccgtaa ggtcccggga gtgatttacg cgcgccgcta
     1381 tcgggttctc gagggtacca gtgggtacag cacggtctac gaattcgcca gtacggcagt
     1441 gccagaaagc ccggagtgga aggagcaaca gcaacattcc tcgcccaact cgtcgcgcat
     1501 gcggcaagcc atgacgcatg caccgggttc cgcgggagtg tacgagcggg tcaaccgctg
     1561 atgcccggag ggtcctcctt gccaccccgg gaggacccgc ttgcgtcgac gatctgcgta
     1621 cgatggctct taatgatcga agccgaacag cttttgcgcg ttgtggtgca ggatcttgtc
     1681 ggtgacttcg cctggcagtc cgagtcgctc gataaaggca aacgtctccc gatagacctc
     1741 ccaatcctgc aacaccggat agtcgctccc ggtcacgatg tgatccgccc cgaacgcttc
     1801 gagcgcgcat agaaacgccg gcttcgaccc gtaacacacg gtgtcatagt aaaacctccg
     1861 ggcggtaacg ctcggcgctt cggcgaggtt gggatggcct cgcgggccct gaccctgttt
     1921 gtcgagacgg ttcatgagca tcgggatcgg gccgccgaga tgcggcacga tgaatttaat
     1981 gcgcgggtac cggtagggga tctgctttgc aatcatatgg agcacgaaag tcgcgtcctc
     2041 gagcgaggtg ccgaccgacc cgccatagtt gtaatcgatg atgaacggag agcagatggc
     2101 gctgccggca gggtgcacga acagtaccgc gccgcggcgg ttcatctcgg catagagcgg
     2161 ctcgaactcg gtctcggcga tcgagcggcc gaggcacacg atgttcatgt tgacgccgac
     2221 acagccaagc tcgtcaaagc cgcgctccat ttccctcagc gacgcgtcga tatgcggcaa
     2281 tggcagcatc acataggagc tgatccggtc ggggtagcga cgcgcgaact cggcatacgc
     2341 gtcgttcagc atcttgaccg cggtgacgca ctccgcttcg tcgggcagat agggtgggtg
     2401 attcggtgac aatacctgcc gcccgacgcc ggcgtcttcc atcagccgga aacgagcctc
     2461 gatgtcctcc tgcgtatccg agaacgggtg acgcgcaagc ccgcgcttta ccgccagatg
     2521 agtcggtgag gcaaagcggt cgcccatgaa ctcactgaaa ttcttcgggg tgtagtgcgc
     2581 atgcacatcg cagatcatca caaactcctc ttaatcacat gggttcaacg cgaccgaagc
     2641 cgcggatgca gtgatgcgag accgggcgcc gcaaatgtgg ggccagggga tcgtgctcca
     2701 gcccttcggc atcagccgag cgtgcgctca ggtgtgttca ctaccacggt gcgaccatcg
     2761 ggatgctaga gcggatctgg atcggtcgca acttttcgag gttttcaaac tggacctgca
     2821 ggtgccggtg gtggggttgt tccatcccgc aagtgatcgg aagcgagccg ttggacatgg
     2881 ttcacccctc agtggcaaat gactcttcat aggcctggtt cgtcacgccc caggggatac
     2941 ccattaaggt gtctttaaca cgcggagcgt aagtgcacgg ggtcggtgtc accgtcacgc
     3001 ggcgcccctt gtggatcgaa cgtatgcaac gcgggttact cgatgcaggg tccctccaac
     3061 gtttgttgta tgaagcgttg gacgcttctg acgatctggt tatggtgttg gagcgcattc
     3121 atgagggttc cgacggactt gtaattggat ctgccaatga cgctttttgc cggatctccg
     3181 gccatgccgt cactgatttg gtcggacgtc cttttgcatc cctggccgcg ccagattcaa
     3241 tcccagcgag ttggaatgcg gctctcgcgg cggcacacga tcagaagtcc ttccgctccg
     3301 aactgctgtg cggccgaccg gacggtcgga ctttttggtt tggcctgcac atcatgccga
     3361 ctgcgcgggg agggccgcga ttcaacgtcg tactcgggcg cgatatcacc gcagcccggc
     3421 tggaccggca gcagcaggcc tcagtccaag gactactcgc caaagtgttc gcctcggtgc
     3481 cgacagccgt cggcatcctg gaggaacacg gtgtcatcgt aatgaccaac ccggcgctgg
     3541 acagtctgct aggcttcgcg cccggtgggt tggttggcaa gggcgacgtc gaccaggtcg
     3601 cccccgagga ccggactgcg ctcctggcag cgcggcagcg tcagatcgaa tccggactac
     3661 cgtacaccat taaattcaag gcgctgcatg ccgatgggtc gaggattccg gtgaaatttt
     3721 cttcgacttt ggtcgagcga gaggatctga aacggttccg gatcgttacc gttaccccga
     3781 ctgccgttga caccgactct ccgccggtga ccgtccacat cgcgggcaag atcaagctta
     3841 tcggcctgga ggaagtcagg gcggcgcttg gcagtcgctg gcctgccgtg gcggagcgcg
     3901 ccatggccgt cgcggagcac gtcgttaaac ggcgatgcgg accgcgcgat acctgggccc
     3961 gcacgacgga cagcggtatc gtcatttgct tcggtgagac aaccgaggag gaggctgccc
     4021 tgcgggcgac cgcgatcgct cgcgatatcc gcgcacgtct gatcggcgag ggcgaggaac
     4081 cgggccgggc ggaggtctcg gcggtcacca gcgccgtcga gcttgtcgat gaaaatggtc
     4141 gcccggtcga taccctggcc gaggctttgg gccgtcggtt aaacgcgagg ctggcggagt
     4201 ttgaacagcg ggcacgggaa accttgcgcg ttgccacgca atctgtgacc tgtgaactcg
     4261 cggcgattca tgatcacacc atatatcggg atatcgggca tttcgccacg ctcccacgcc
     4321 ggttggaaga tcgggtgtgc agcgcacttg ctgtattgcc aaccgctgcg cgcggcgaat
     4381 tcgagtttga tcgacttgtg ttaggcgcgg cggcggaaca cgttattcag aagatcgcca
     4441 gcggagcacc accgctgatc ctggtcccat tcgattttga tttgttcctg gaccgacaac
     4501 gtatggaacg ttatctcgcc acctgccgcg cggtggacgc cagattgcgg caacacctga
     4561 tcctcgtgct gtcgaattta ccgcgcggcg ttccgagaag tcgtgtgcag gaatgcgtca
     4621 tgcggctacg cccattatgc cagatggtgg cctttcaatc tgcggacatt gattgcccgg
     4681 ctgtggaatt ctccgcgcta aacggctcga ttgtcgtcct gtcggagacc gacatgaacc
     4741 gatttgatgc gcggagcctc gcgaaattgc aaaagttgat cggcctgacc agggcccagc
     4801 gcgcgcgcat actggtacgc caggttggca ctaccgatgc cggtaggcgc ttgctgaagc
     4861 tgggggtgaa cctcattgca ctggcgaata atccctgagg ggacaacgac atagaacggg
     4921 tggagtggca cggcagaccg tgtacgctgt tgaaatggtg acggagtttt gcggcgtgtt
     4981 aaactctggg agcccgcaaa tccgcacgga actacgtctt gtaggggcgg caggagcaaa
     5041 tttggacgga actctaccga tcgacggtga ttcccccgct tccatggctg cctgagacaa
     5101 atagtcgcca cgccagcgtg gttcgtgtgg atctttatcg cgatattcga ccttgctcca
     5161 gtcatcgttg tccgacgctg ggggcgttcg gagtgggctc ggacaaaaag ttcgcagccc
     5221 tgacctccga tccgtccatt gacctgatgc ggttgtggta tcccgagagc gttccggtta
     5281 gcgctccctc gaggaattga cgggcagcgc aaacggacct gcggaaaacc gacgcgtggc
     5341 gggatagccg gcatcgggga gggacgacgg gtcaacacct ttcaatcgaa attttggttt
     5401 cagtgccccg ctcacacctg ggtcgctacc cgtatatcat gttgcatcgc agcataggcc
     5461 gcgtacatag tgctgctggc cagccggatg acgggtgaaa cctgagtgtg agagttctcc
     5521 ttgccgacga tgatgctgag cgggtccggg cattgaccac agtcttgtcg gctgacccga
     5581 gcctgacgat cctccgcccc cggccgggtg agttgctcgc ggacgcggtc gaagcccaga
     5641 ccccggacgt cgtactggtc gacatggcgc gccccgatcg cgatgcgctg gaaggcatcc
     5701 gcgttgtcag cgccaattcg cccaggccga tcgtgctgtt cgtggatcag gacgatcctg
     5761 ggttcatgga ggacgcgatc cgtgccggcg tgtcgtccta caacgtgctt ggggtgccgc
     5821 cgctggatgt caaaccgatc ctccgcgctg cgaccgccat gttccgccag catcaggccg
     5881 cccggactga gttgcggcag gccgagcaac ggctgcgtga acgagagatt gtcgaccgtg
     5941 ccaaggcgat cctgatcaag cagcggcaca tgaccgagcc cgttgcctat cgctggctcc
     6001 gctcccgcgc gatggcgagt ggccggcgga ttttcgacat cgcccaggac ctcgtggccg
     6061 ggcgattggt tgcgcatggc gatcgggcac gcatgtctgg aaatgccatt tcccgggacg
     6121 acaccgatgt cggtaatgag gccagagagg
//
LOCUS       DATAVD010001052         3851 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3077338, whole genome shotgun sequence.
ACCESSION   DATAVD010001052 DATAVD010000000
VERSION     DATAVD010001052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3851
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3077338"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            260..1225
                     /locus_tag="VHX39_20030"
     CDS             260..1225
                     /locus_tag="VHX39_20030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993470.1"
                     /translation="MQTWLESNTAAEDAADVVAILWPWSENDSCRQYSEKATYEAAAR
                     RLLLLERGVLSRTPASLPHCWWSAIPFLYNQNDPGTQMQREVVADMVADPTQNVTVVL
                     PQTSDSLPRSIGGPALIYNATTGVWSGGDPLHRDIPDNQRFGRLAAPIVARAVLAAEG
                     GDTLASIPPGIPAVGGPVVTHVWRQSNTSVVVTVQHDCGTDLIVPATLAATGIGWAVM
                     DGGSVATPGTIVKATACVRLNATQLQITLTQALVSLSANSRLFYPYGTGIMGRGNVVT
                     DNLSLVTPPAWWNIAGDLGSDWSLNMPVHVLMMTASGVVLSDTPA"
     gene            1331..2428
                     /locus_tag="VHX39_20035"
     CDS             1331..2428
                     /locus_tag="VHX39_20035"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3993471.1"
                     /translation="MDVGIQMIFSTYGWPGMSDREAWQQEIHLARVADEVGFDVIWSV
                     EHHFFDYSFCPDNTQLLSYLAPLCTHADLGTAAIILPWNDPLRIAEKVAVLDLLSNGR
                     VRLGIGRGLARREFAAFRGTMEDSRQRFDESSKMILDALRTGFIEGNGPFYPQPRIEI
                     RPRPEKSFADRTYAVASSEDSIDAAARLQARMLMFADRPWPLRLPGIQKYRELYAKYH
                     GAEAPPVVTADQCVCAATSAEAEDLAERHMASFVDSNLEHYELMNTHFETTKGYDAYA
                     QKSRIARETGRDGLVKALLQVAVRGTPDQVLRAYEQRRALLGDFELNSSYRFGGIPLA
                     KAEASMRLFATEVLPVLKTWQPAAAAAPVAA"
     gene            2489..3430
                     /locus_tag="VHX39_20040"
     CDS             2489..3430
                     /locus_tag="VHX39_20040"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3993472.1"
                     /translation="MAPKLGYLLPTREQIMEGKPDAASLLALATRAEAEGYDSIWVGD
                     SVLARPRHDPLTLLAGVAGRVPRVQLGTAVLLPALRNPVLLAHQVATIDQISEGRLIL
                     GVGFAADVPNIRAEFAACGVPFDKRIGRMMDGLRLCRALWTGQPVDWEGRWPVQQGVL
                     APTPYRAGGPPLWIGGNLPTSLERAGKFFDGWFPVAPDAEAFGSGLAQVRSIATDAGR
                     DPASVEGAMYVTIALDDDVAKANDRLMRFLGAYYAPQPPEAVRKRQACYAGPVAGVTA
                     YLEAYAQAGVTHFCVRFAGEHESHMTALARARVSLGW"
     gene            3519..>3851
                     /locus_tag="VHX39_20045"
     CDS             3519..>3851
                     /locus_tag="VHX39_20045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993473.1"
                     /translation="MKFPVIATFVVFAGFVGNMTAKAADVAKVETIALIRHGEKPPAG
                     LGQLTCQGLNRALALPAVIRKVFRRPAAIFAPNPAEQKPDNGTLYDYVRPLATVEPTA
                     IAFGLPIHA"
BASE COUNT          658 a         1159 c         1288 g          746 t
ORIGIN      
        1 catggtttcg ggccagtcca actccggcaa cgcgttgaac gacggggcct ggcatttgct
       61 cgcccagggt gtggcgtggc atctgggggc gctggggttt ggggtggtgg ggaattacgg
      121 cagctagccg gccgccacct gcatccatgg cgaggggatt tatcctctgc cggctctggg
      181 gttttccgga tcattcctca gcgaccccaa tgacggcagc gatccgtcca cctggtcgtt
      241 cggcggtgac gggctggccg tgcagacctg gctcgagtcc aataccgcag ccgaggatgc
      301 cgccgatgtc gtcgcaatcc tctggccctg gtccgagaac gacagttgcc ggcaatacag
      361 cgagaaggcg acctatgagg cggccgcgcg ccgcctgttg ttgctcgagc gcggcgtatt
      421 gtctcgaacg cctgcaagcc tgccgcattg ctggtggtcg gccattccgt ttctgtacaa
      481 ccagaacgat cccggcacgc aaatgcagcg cgaggtcgtg gcggatatgg tcgctgaccc
      541 gacgcagaac gtgacggtgg tgttgccgca aacctccgac agcctgccgc gcagcattgg
      601 cggtccggcg ctgatctaca atgcgaccac gggcgtttgg agtggcggtg acccgttgca
      661 tcgtgacatc ccggacaacc agcggttcgg caggctggcc gcgccgattg ttgcgcgggc
      721 cgtgctggcg gccgagggcg gcgatacgct tgcgtccatt ccgcccggta ttcccgccgt
      781 tggcgggccg gtggtgacac atgtctggcg ccagtcgaac acgagcgtgg tcgtaacagt
      841 tcagcacgat tgcggcaccg atctgatcgt gccggccacg ttggctgcga ccggcatcgg
      901 atgggcggtg atggacggag gctcggtcgc gacacccgga acgatcgtca aggcaacggc
      961 ctgcgtgcgg ctcaatgcga cgcagttgca gatcacgttg acgcaggctc tggtcagcct
     1021 cagtgcgaat tcccggctgt tttatccgta cggcaccggg atcatgggcc gcggcaatgt
     1081 ggtgaccgac aatttgtcgc tggtcacgcc gccggcctgg tggaacatcg cgggtgatct
     1141 cggctcggac tggagcctca atatgccggt gcatgtgctg atgatgaccg cgtctggcgt
     1201 ggtactgagc gacacgccgg cctgacgatc ctggtcttgc cattgtcatc tcggccgcgg
     1261 catggaagca tactgccggg tagcataacc atcccggcag ttttggtttc ggcaatgacg
     1321 gaggaacccg atggacgtcg gcattcaaat gatcttctcc acctacggct ggcccggcat
     1381 gagcgaccgt gaggcctggc agcaggaaat ccatctggcg cgtgttgccg atgaagtcgg
     1441 cttcgacgtc atctggtcgg tcgagcatca cttcttcgat tattcgttct gcccagacaa
     1501 cacacagttg ctgtcgtatc tcgcgccatt atgcacgcac gccgatctcg gcacggcggc
     1561 catcatcctg ccgtggaacg acccgctgcg gatcgccgaa aaggtcgccg ttctcgacct
     1621 gctcagcaac ggccgggttc gactgggtat tggccgcggc cttgcccgtc gcgagtttgc
     1681 tgcgttccgc ggcaccatgg aagattcgcg gcaacggttc gatgagtcgt cgaagatgat
     1741 cctggacgcc ctgcgcaccg ggttcattga aggcaacggc ccgttctatc cgcagccgcg
     1801 tatcgaaatc cgcccgcggc cggagaagag tttcgcagac cggacctacg ccgttgcgtc
     1861 gagcgaggat tcgatcgatg ccgccgcacg gctgcaggcg cgcatgctga tgtttgccga
     1921 ccggccctgg ccgctgcggc tgcccggcat tcaaaagtat cgcgaattgt acgccaaata
     1981 ccatggcgct gaggccccgc cggtggtcac cgcggatcaa tgcgtttgtg ccgccacctc
     2041 cgccgaggcg gaggacctgg ccgaacgcca catggccagc tttgtcgata gcaacctgga
     2101 acactacgag ttgatgaaca cgcatttcga aaccaccaag ggctatgacg cttacgccca
     2161 gaagtcgaga attgcgcgag aaaccgggcg tgacgggctg gtgaaagctc tgttgcaggt
     2221 ggcggtgcgc ggcacgccgg atcaggtgtt gcgggcttac gagcaacgtc gcgcgctgtt
     2281 gggcgacttc gaattgaaca gttcgtaccg gtttggcggc attccgctgg cgaaggccga
     2341 ggcctcgatg cggctgtttg cgacagaggt gctgccggtg ctgaagacct ggcagcctgc
     2401 cgccgccgcc gctccggtcg cggcctgaag tcttgccttc ccggtgctga cccacgatcc
     2461 tccgggtgcg aaccggagga ctgcaacgat ggcacccaaa ctcggctacc tgctgcccac
     2521 gcgtgagcaa atcatggagg gtaagcccga cgcggcgtcg ttgctggcgc ttgccacaag
     2581 ggctgaggcc gaagggtacg attcgatctg ggtcggcgat tcagtgctgg ccaggcctcg
     2641 gcatgatccg ctgacgttat tggccggcgt ggcggggagg gtgcctcggg tgcagctggg
     2701 gacggcggtg ttgctgccgg cgctgcgcaa tccggtgctg ttggcgcatc aggtggcgac
     2761 gattgatcaa atctcggaag gcaggctgat cctgggtgtt ggtttcgccg cagacgtgcc
     2821 gaacattcgc gccgagtttg ccgcctgcgg cgtgccgttc gacaagcgga tcggccgcat
     2881 gatggacggg ctgcggctct gccgcgcgct gtggaccggt cagccggtgg attgggaggg
     2941 acgctggccg gtgcaacaag gtgtgttggc acccacgccg taccgggcgg gagggcctcc
     3001 actgtggatc ggcggtaatc tgccgaccag cctggaacgt gccggcaaat tctttgatgg
     3061 ctggttcccg gtggcgcccg atgccgaagc gttcggatcc gggctggcgc aggtgcgctc
     3121 gatcgccacc gatgcaggac gcgatccggc gtcggtcgag ggtgccatgt acgtaacgat
     3181 tgcactcgac gacgatgtgg caaaagcgaa cgatcggctg atgcgcttcc ttggtgccta
     3241 ttatgcacca caaccgccag aggcggtccg taagcggcag gcttgttacg ccggaccggt
     3301 ggcgggcgtt acggcatatc ttgaggccta tgcacaggca ggggtgacgc atttctgcgt
     3361 gcggttcgcc ggcgaacacg aatcccacat gacagcgctt gccagggcga gggtgtcact
     3421 ggggtggtaa caatgacacc gttccgcgcg cttccgcagg tggaacgaat tgtcgaccga
     3481 tcgtttggtc gtgcacggga gccgctatga ggcgttgcat gaaattcccg gttattgcaa
     3541 cgttcgttgt atttgcaggt tttgtcggca acatgacggc gaaagcagca gacgttgcca
     3601 aagtcgagac aattgccctt atccgtcacg gtgaaaaacc gcccgccggc ctgggccagc
     3661 tcacctgcca gggactgaac cgcgcgctcg cattgcccgc agtcattcgc aaggtcttcc
     3721 gcaggccggc ggcgattttt gcgcccaacc cggccgagca aaagcctgac aacggcacgt
     3781 tgtacgacta cgtccgcccg ctggcgacag ttgagccaac tgccattgcc tttggcctgc
     3841 cgatccacgc g
//
LOCUS       DATAVD010001053         2757 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3451559, whole genome shotgun sequence.
ACCESSION   DATAVD010001053 DATAVD010000000
VERSION     DATAVD010001053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2757
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3451559"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1021
                     /locus_tag="VHX39_20050"
     CDS             <1..1021
                     /locus_tag="VHX39_20050"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEX3993474.1"
                     /translation="NSNLGLLRIRTDSGVEGLAFLGSATNPASMDGPQLIRSLKPMLM
                     GKDPLEREKIHAGMRLINRVVSYRTIGAVDTALWDLAGKIAGMPVHALMGTYRNSIPA
                     YASSQVLPDIAAYVDQATSFKEAGWQAYKIHPPRDPDRDIKVCEAVRKAVGDEYRIML
                     DSTWSYDYVDALRVGRAIEEMGYYWFEDPLADEDVYNYGKLRQKLNIPIMATEFPAGG
                     LDTYPIWLTEQATDYLRGDIPNKGGLTTMLKSAHLAEAFGLRYEVHHSGNSLNNRANL
                     HLCMALRNTTMWEVLLPDGAHKYGMAEDLAPDKDGLMHAPAEPGIGGNIDFELIKRKT
                     EAVLT"
     gene            1034..1720
                     /locus_tag="VHX39_20055"
     CDS             1034..1720
                     /locus_tag="VHX39_20055"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3993475.1"
                     /translation="MNRDTNGRLSKIRSPLRACEDTPEGAACREVFRELKNPYYIGDD
                     PALTQTTGWADAWTSQPGIYAVAAETAQDVAAAVNFARENNVRLVVRGGGHSYLGTSS
                     APDSLLIWTRHINAITLHDAFTPQGCQTPHRAVSIGSGAIWMHTYNAVTTKGGRYVQG
                     GGCGTVDVAGLVLGGGFGSYSRNYGTAAASLLEAEVVTADGNVRIANACSNPDLYWLS
                     KAAVAALLGS"
     gene            1657..2562
                     /locus_tag="VHX39_20060"
     CDS             1657..2562
                     /locus_tag="VHX39_20060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993476.1"
                     /translation="MLEPRPVLALKGGGGGTFGVVTRLTLRTHDLPEWFGIVAMSIQA
                     ASAQAYRRLLGRFVGFYAASLLNPHWGEIVKLRSPNLLDINLEFQGLDRQRAEAIWRP
                     FIEFVTGSPQDYTIRRPPVMLDTAARNRWDPAFFKANAPTAIMTDDRPGASADNIFWS
                     GNLAESGHFLHGFQSIWLPSSLLRPEQQDGLADALFAASRLWTVELLFQKGLAGASDD
                     VIAATRDTATNPAVLDACLLAIIASEGPPAYQGLRGHEPDLAAARRDARMIGAAMNQL
                     KALVPDAGCYVAESDFFEPNWQAAY"
BASE COUNT          551 a          852 c          831 g          523 t
ORIGIN      
        1 caacagcaat ctcggattgt tacgtatccg taccgattct ggcgtcgaag gcctcgcctt
       61 cctgggttcg gcgaccaacc cggcctcaat ggacggaccg caactcatcc gctcgctgaa
      121 accgatgctg atgggcaagg acccgctgga acgggaaaaa atccatgccg gcatgcggct
      181 gatcaatcgc gtggtcagtt atcgcacgat cggagcggtc gataccgcgt tgtgggacct
      241 cgccggcaaa atcgccggaa tgccggtaca cgcgctgatg ggaacgtatc gaaattcgat
      301 cccggcctat gccagttcgc aggtgcttcc ggacatcgcc gcctatgtcg atcaggcgac
      361 atcgttcaag gaagcgggtt ggcaggccta caagatccat ccgccacgcg atcccgaccg
      421 cgacatcaaa gtctgcgaag ccgtgcgtaa ggcggttggc gacgagtatc gcatcatgct
      481 ggattcgacc tggtcctacg attacgtgga cgccttgcgc gtcggccgcg cgatcgagga
      541 aatgggctat tattggtttg aggacccgct tgccgacgag gacgtctaca actacggcaa
      601 gttgcgccaa aagttgaaca ttccgatcat ggcaacggaa ttcccggccg gagggctcga
      661 tacctatccg atctggctga ccgagcaggc caccgactat ttgcgtggcg acatccccaa
      721 caagggcggc ctgaccacga tgttgaaatc cgcgcatctg gccgaggcgt ttggcttgcg
      781 ttacgaagtg catcattccg gtaattcact gaataaccgg gccaacctgc atctgtgcat
      841 ggcattgcgg aacaccacga tgtgggaggt cctgctgccc gacggtgccc acaaatacgg
      901 gatggcggaa gacctggcac ccgacaagga cggtctgatg cacgcaccgg ccgaacccgg
      961 gatcggcggc aacatcgatt ttgaattgat caagcgcaaa accgaagctg tgctcacctg
     1021 atcatgagaa caattgaatc gggacaccaa cggacgattg agcaaaatcc gctcgccttt
     1081 gcgtgcctgc gaggacactc ctgagggtgc ggcctgccgc gaggtcttcc gggaactgaa
     1141 aaacccgtac tacatcggcg atgatcccgc tctgacgcaa accacaggct gggctgacgc
     1201 ctggacgtca cagcctggca tctatgcagt cgcggccgag accgcccagg acgttgccgc
     1261 tgccgtaaac ttcgcccgag agaacaacgt tcggcttgtc gtccgaggcg gcggccacag
     1321 ctacctcggc acatccagcg cgccggactc cctgctgatc tggacccgcc acatcaacgc
     1381 catcacgttg cacgacgcct ttacgcccca gggatgccaa acgccgcacc gggctgtgtc
     1441 catcggatcc ggggcaatct ggatgcacac ctacaacgcg gtcacgacca agggcggccg
     1501 ttatgtgcag ggcggcggct gcggcacggt cgacgtcgcc ggtttggtac tgggcggcgg
     1561 ctttggcagc tactccagga actatgggac tgcggccgcg tctctgctgg aagcggaggt
     1621 cgtcaccgcc gatggcaacg tgcgcatcgc caacgcatgc tcgaaccccg acctgtattg
     1681 gctctcaaag gcggcggtgg cggcactttt ggggtcgtga cccgattgac gttgcgcacg
     1741 cacgacctgc cggaatggtt cggaattgtt gccatgtcga tccaggccgc ttccgctcag
     1801 gcttatcgcc gattgctcgg tcgttttgtc ggcttttacg ccgcgtcact gctcaatccg
     1861 cactggggtg agatcgttaa gctacgctca cccaatttgc tggatatcaa cctggagttt
     1921 cagggtctgg accgtcagcg tgcggaggca atctggcgac cgttcatcga attcgtgacc
     1981 ggctcgccgc aggattacac gatccggcgc ccgcctgtga tgctcgacac cgcagcccgg
     2041 aatcggtggg acccggcatt cttcaaggcg aacgcgccaa ccgccatcat gacggacgac
     2101 cggccggggg cctcagccga caacatcttc tggtccggca acctcgccga atctgggcat
     2161 ttcctgcacg gattccaatc gatctggctg ccgtcgtcgt tgctgcggcc ggaacaacag
     2221 gacgggctag ctgacgctct gttcgcagcc agccgcttgt ggaccgtcga actgcttttc
     2281 cagaaaggcc tcgccggcgc atcagacgat gtgattgccg cgacaagaga taccgcgacc
     2341 aatcctgcgg tgctcgacgc ctgtctgctg gcgattatcg cgagtgaagg cccgccggct
     2401 taccaaggtc tgcgcggcca cgagcccgac ctcgctgcgg cacgacggga cgcgcgcatg
     2461 attggtgcgg caatgaacca actcaaggcg ctcgtaccgg atgcaggctg ttatgtcgca
     2521 gaaagcgact ttttcgagcc aaactggcaa gctgcctatt gaggcccgca atatccgagg
     2581 ctgctggcga tcaagcaaac ctatgatccg accgggctat ttttcgcccg tcatggcgtc
     2641 ggcagcgaag cctggaggga tgacggattt tcccgtgtgg ccaggccctg acgggtggcg
     2701 ttcgcggtaa ccgcggggtg aaaattccag cgctgccgcc cgcgccagtt ctgtaaa
//
LOCUS       DATAVD010001054         2783 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1591455, whole genome shotgun sequence.
ACCESSION   DATAVD010001054 DATAVD010000000
VERSION     DATAVD010001054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2783
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1591455"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..423
                     /locus_tag="VHX39_20065"
     CDS             <1..423
                     /locus_tag="VHX39_20065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3993477.1"
                     /translation="GAGPVPIEGPDIRDAFLLDGIEAQAAQYGFEARNVTPDRWLQEG
                     EHVTLGPHRFDILHCPGHTPGHLVYINHRAKFGLLGDVLFQGSVGRTDFPYGDHDALI
                     EAIMTKLLPLGDDYSFSCGHGPGSSIGAERRTNPFLRK"
     gene            515..910
                     /locus_tag="VHX39_20070"
     CDS             515..910
                     /locus_tag="VHX39_20070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993478.1"
                     /translation="MDYLPPFETLKTFLNFGAADGELTVSASYKQFTLMIRSLLQGIE
                     VDEAWYLAQYPDVAEAIRNGLVISARVHFLGNGYFEGRMPFPIMVDEAWYLEQNPGVA
                     GHIASGELLSAQQHFNDNGYREGRKPRPR"
     gene            complement(916..1257)
                     /locus_tag="VHX39_20075"
     CDS             complement(916..1257)
                     /locus_tag="VHX39_20075"
                     /inference="COORDINATES: protein motif:HMM:NF021125.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lin0512 family protein"
                     /protein_id="HEX3993479.1"
                     /translation="MALKRVILEMGTGNDLHGGNYTKAALRAVQDAIHHSSLGMLRSL
                     GIDSKTMRVEVTIGVQQPDKVDTDAVAATLPHGVATVKAVKGGLDVPDQAGGDVAIIA
                     SAAVAVRLDLP"
     gene            complement(1270..1611)
                     /locus_tag="VHX39_20080"
     CDS             complement(1270..1611)
                     /locus_tag="VHX39_20080"
                     /inference="COORDINATES: protein motif:HMM:NF021125.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lin0512 family protein"
                     /protein_id="HEX3993480.1"
                     /translation="MALKRMVLEIGMGTDIRGGDDTKAAVRALRDALWHNSLSVAAAL
                     GLDTDSMQVEVTIGTPHPEKVDKAQVLAVLPHGTGTVTVVQGGLEIPNDEGTNVTLLA
                     QAAAVVWLDVA"
     gene            2284..>2783
                     /locus_tag="VHX39_20085"
     CDS             2284..>2783
                     /locus_tag="VHX39_20085"
                     /inference="COORDINATES: protein motif:HMM:NF020068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HEX3993481.1"
                     /translation="MNLAPISPSEVPNISIAVRRVELTGATLFNAELQPYLSGLTGPA
                     TPLTVLDKTRGDILLYYRSRGYALTSVALAIDRSNGVVQYRVTEGHIAAVKLDGDIGP
                     AGSMVLRFLKHLTEYPVIDTLTLERWLLLAQDVPGVTLSTVLEPSKDDPGALTLVAQV
                     SLKHVSG"
BASE COUNT          515 a          871 c          825 g          572 t
ORIGIN      
        1 ggcgccggtc cggtgccgat tgaggggcca gatattcgcg acgcgtttct tttggacggc
       61 atcgaagccc aggctgcgca gtacgggttc gaggcgcgga acgtgacccc ggatcgatgg
      121 ttacaggagg gcgaacatgt cactcttgga ccgcatcgtt tcgatatact gcactgtccg
      181 gggcataccc ccggtcatct tgtctacatc aatcaccgtg caaagttcgg gcttttgggc
      241 gacgtgttgt tccagggctc ggttggccga accgactttc cctacggcga tcatgacgcg
      301 ctgatcgaag ccatcatgac aaagctgctg cctctgggcg acgattatag cttttcttgc
      361 ggccacgggc cgggatcgtc gatcggcgcc gaacggcgaa cgaacccttt cctccgcaag
      421 tgaaacttgc cagttgctgt ctcagcatga gctgaatcgc ttgcatccgg gccgattttt
      481 gctatttgtc agtcgaaccg gagcgaacca tcccgtggat tacctgcctc catttgagac
      541 gctcaagacg ttcctgaatt tcggggcggc tgacggtgaa ctcacggtca gcgcaagcta
      601 taagcagttt acccttatga tccgctcgct gctgcagggc attgaggtcg atgaggcgtg
      661 gtatctggcc cagtaccccg acgtggccga ggcaattcgt aatggcctcg tgatatccgc
      721 cagagtgcat tttctgggta atgggtattt tgagggacgc atgccgttcc cgatcatggt
      781 cgatgaggcc tggtatctgg aacaaaaccc cggtgtcgca gggcatatcg ccagcggcga
      841 actgctgtcg gcgcagcagc acttcaacga caacggctat cgcgagggcc gcaaaccccg
      901 tccgcggtga ggcagttaag gcagatcgag ccgcaccgcc accgccgcac tggcgatgat
      961 tgcgacatcg ccgcccgcct ggtccggcac gtctaaacca ccttttaccg ctttgactgt
     1021 ggcgactcca tgcggcagcg tcgccgccac cgcatcggtg tccaccttgt ccggctgttg
     1081 cacgccgatc gtgacctcca cccgcatcgt ttttgaatcg ataccaaggg agcggagcat
     1141 gcccagcgaa ctatgatgga tcgcatcctg caccgcccgc agcgctgcct tggtatagtt
     1201 cccgccatgc aggtcgttgc cggtgcccat ttcgaggata acgcgcttca gtgccatcgt
     1261 cccgctccct tacgccacat ccagccacac aaccgctgcc gcctgcgcca gcagagtgac
     1321 gttggtacct tcgtcattcg gaatttcgag gccaccctga accaccgtca ccgtgccggt
     1381 cccatgcggc aacaccgcca gcacctgggc tttgtcgacc ttctccggat gcggcgtgcc
     1441 gatcgtcacc tcgacctgca ttgaatcggt atccaggccg agcgccgctg ccacactcag
     1501 ggaattgtgc cacagcgcgt cacgcagcgc gcgcaccgcg gctttggtgt catcgccacc
     1561 gcgaatgtcg gtacccatgc caatttccag gaccatgcgc ttcagggcca tgtccggttc
     1621 cctccggttg cttgcaggac aatagacgcg cggcatggtg ccgtcatccc gtggcgattg
     1681 gcctgggcga tttgcacgcc gatcgcgaga tggagagccg gaagcccctg ccgttccggg
     1741 cctgcacgat gcatgaagac gttcttactc cggaatgtcc cggcgtcacg gacagctcac
     1801 cataacctgc cgtaatgtcg ccagcaaaaa acgcgatgct ggtcgaatca gcggatcctg
     1861 atatacccaa cggagcgggc ggaatccgtt ccaccagaag gatgatctgc cgccgcgcga
     1921 tggtttcagg cgaaaggggc ggcagtgtga atggatcgaa ggtcccgtcg tggatcggac
     1981 gcttgatgcg ccgcgaccga cagcggcatt cagtgcgtca tcacaagggt gatcgctcac
     2041 taccgggtgc ggcgaaccgg gtaacacaga cgtgacgttg gcgctggttg cagcaaagcg
     2101 tttgacgtga ccgtggcccg tttcagtcgc cacagcgcat ggatgactgt gctacttgtt
     2161 ctgtccggct gcccggctct ggcacaaacg ccgccgtcgt taggcggaat cccgcaaccg
     2221 cctgccgggt cgccgatcca gcgtggagca ccgcagcctc ttccccccgt gtcgccaaac
     2281 gggatgaacc ttgccccgat ttcgccttcc gaggtgccga acatatccat cgccgtgcgt
     2341 cgcgtcgaac tcaccggcgc gacgttattc aatgcagaac tgcaacctta cctctccggg
     2401 ctgaccggtc cggcaacgcc gcttacggtg ctcgacaaga cccggggaga cattctgctt
     2461 tactatcggt cgcgcggtta cgcgttgacc tcggtcgcgt tggcgatcga tcgcagcaat
     2521 ggcgttgtgc aatatcgcgt gaccgaaggg cacattgccg cggtcaaatt ggatggcgac
     2581 attgggcccg ccggctcaat ggttctgcgt ttcctgaagc atctgaccga gtatccggtc
     2641 atcgatacct tgacgctgga acgctggctg ctgctggcac aggacgtgcc tggcgtcacg
     2701 ctgagcacag tgctggaacc ctcgaaagac gacccgggtg cgctgacact ggtcgcgcag
     2761 gtcagtttga agcatgtgtc ggg
//
LOCUS       DATAVD010001055         2749 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1219189, whole genome shotgun sequence.
ACCESSION   DATAVD010001055 DATAVD010000000
VERSION     DATAVD010001055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2749
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1219189"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..1668
                     /locus_tag="VHX39_20090"
     CDS             124..1668
                     /locus_tag="VHX39_20090"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX3993482.1"
                     /translation="MTEQSNNPASINAQTIPDGEASAANSTDSAQTSSELGQVPQKGR
                     NAKRKRKRKLLIGVTGIAVLAVLLVFGIPWVKEMLNTVSTDDAFVNGHVTFVAPRVAG
                     QISRVLVDDNVRVHKGDLLAELDKEPYRVAVSEKQAAVDTAKANLQAAMAAVRAIEAE
                     ARSRRWNLQRAVEGVDNQVALLHARVAAVDKSKAALTLAQIQFDRAQQLVGSADVSRA
                     VYDQRQAELTTAGAGLKQALAGVYQVRVSLGLPAQPAGAGDLGNVPPDLDETFSSVLE
                     AQAELIQSAAELGVVHAFDQGPKAMLDQFGKLGDIDKTFVRFAADAPAVKQAEAKLEA
                     ARRDLAQAELNLRYCDITAKIDGVVTRRNVNPGNYVQVGQNLMAVRSLNDIWIDANFK
                     ETQLRDLRIGQPVSLYVDMYGGRHVFKGRISGFTEGTGSTLALLPPENATGNFVKVVQ
                     RLPVRIDLVDYDADKTPLFIGTSVVPYVYINKPPTGPNAGKFLQAYAPRSPSSDPAAS
                     VAGTRQ"
     gene            1665..>2749
                     /locus_tag="VHX39_20095"
     CDS             1665..>2749
                     /locus_tag="VHX39_20095"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX3993483.1"
                     /translation="MTGPAPSLTVQNSRSPAATNPWVVAAVVVVPTFMEVLDTTIAVV
                     ALRYIAGGLSATVNDGEWVITSYLAANAIILPITGWLIAHLGRRNYFLLSIAVFTLAS
                     ALCGMATGLGELILFRVIQGLAGGGLQPSSQGVLLDAFPVERQGMAMTLFGLAALIAP
                     VVGPTLGGWITDSYSWRWVFWINVPIGLVALGACAITLRDPDYLKAERVELRKRPFSF
                     DGVGLSLLVIVVVCWEIMLSKGQEWDWLGDPFWRVQTLAILFAVGLAGLIFWELRHPS
                     PVVNFRPLRERNFAACCIIIFCAYAVLYASSTALPALLQSLFGYDALSAGLVMSPAGF
                     FALVTMPFVGRALGRGTDARWVIAAGL"
BASE COUNT          472 a          870 c          864 g          543 t
ORIGIN      
        1 ttgctccttc gaggatgccg ccagaatgcg ccggcgctac aggcgggcgc gatatacttt
       61 cggtcaggcg agcggtggcc gttcgacact gtctgtctgg accctttgca gcgggtggcc
      121 gacatgaccg agcaaagcaa caatccagct tcgatcaacg cgcagacgat accggacgga
      181 gaggcttcgg ccgccaacag caccgattcc gcgcagacat catcggaact cgggcaggtg
      241 ccccaaaaag gccgaaacgc taagcggaag cgaaagcgaa agcttctgat cggtgtgacc
      301 ggcattgctg ttctggcagt tctcctcgtg tttggcatcc cttgggtcaa agagatgctc
      361 aacaccgtct ccacggacga cgcgttcgtg aatgggcacg tgacgtttgt tgcgccccgc
      421 gtggcaggac aaatctcccg cgttctggtc gatgacaacg tccgtgtgca taagggggat
      481 ctcctcgccg agctggacaa ggagccgtac cgggtcgcgg tctccgaaaa acaggcggcg
      541 gtcgacaccg cgaaagcaaa cctgcaggca gccatggcgg cggtgcgcgc gatcgaagcg
      601 gaggcgagga gccgacgctg gaacctgcaa cgcgccgtgg agggtgtcga taaccaggtc
      661 gcgcttctgc acgcgcgcgt cgccgctgtt gacaagagca aggccgcgtt gacgctggcg
      721 cagattcagt ttgaccgggc acagcagctc gttggcagtg cggatgtatc tcgcgcggta
      781 tacgaccagc ggcaggcgga gctgacgacc gccggtgccg gactgaagca agccttggcc
      841 ggggtctatc aggttcgtgt ctcgctcggg ctgccggcgc aaccggccgg tgccggcgat
      901 ctcggcaacg tgccgcccga tctcgacgag accttttcct ccgttctcga ggcgcaggcg
      961 gaactcatcc agagcgccgc cgagctcggc gtcgtgcacg cgttcgacca ggggccgaaa
     1021 gcgatgctcg accagttcgg aaaactgggc gacatcgaca agacattcgt ccggttcgcg
     1081 gcggatgccc cggccgtcaa gcaggccgag gcgaaactcg aagccgccag gcgcgatctc
     1141 gcgcaggccg aactgaatct tcgttactgc gatatcacag ctaagatcga cggcgtcgtc
     1201 acccgccgca acgtcaatcc gggaaactat gttcaggtcg gccagaacct gatggcggtt
     1261 cgctcgctca acgacatctg gatcgatgcc aacttcaagg agacccagtt acgcgatctg
     1321 cgcattggcc agccggtttc gctttatgtc gacatgtacg gcggccgtca cgtgttcaaa
     1381 ggccgtatct ctggatttac cgaggggacc ggatcgaccc tcgcgctgct gcccccggag
     1441 aatgccaccg gcaatttcgt gaaagtggtc cagcgattgc cggtccggat tgatctcgtc
     1501 gattacgacg ccgataaaac gccgctgttc attggcacgt cggtggttcc ctacgtctat
     1561 atcaacaaac cgccaaccgg acccaatgcc gggaagtttc tccaggccta tgcgccgcgc
     1621 tctccgagtt ccgatccggc cgccagcgtg gcgggcacca ggcaatgacc ggcccggcac
     1681 cgtcgctgac agtccagaat tcccgatccc cggcggcgac aaacccctgg gtcgtcgccg
     1741 ctgtcgtcgt ggtgccgacc ttcatggagg tgctggacac cacgatcgcg gtcgtggcgc
     1801 tgcgctatat tgcgggcgga ctttctgcca cggtcaatga tggcgaatgg gtgatcacca
     1861 gctaccttgc cgccaacgcc atcatcctgc cgattaccgg ctggctcatc gcacatcttg
     1921 ggcgccgcaa ctatttcctg ctttccatcg ccgtcttcac cctcgcttcg gcgctatgcg
     1981 gcatggccac ggggctcggg gaactgatcc tgttccgcgt gatccagggt cttgccggcg
     2041 gtggtcttca gccctcaagc cagggcgtcc tgctggacgc ctttccagtc gagcgacagg
     2101 gcatggccat gacgctgttc ggcctggccg ccctgatcgc gcccgtcgtc ggtcccacgc
     2161 tcggcggctg gataacggac agctactcct ggcgttgggt gttctggatc aatgtcccca
     2221 tcggcctcgt agcccttggc gcgtgtgcca ttacgctccg ggatcccgat tacctcaagg
     2281 ccgaacgcgt cgagttgcgg aagcgaccgt tcagctttga cggcgtcggc ctgtcgctgc
     2341 tggtcatcgt cgtggtctgt tgggagatca tgctcagcaa gggccaggaa tgggattggc
     2401 tgggcgaccc cttctggcgc gtgcagacgc tggcgatcct gtttgccgtt ggcctggccg
     2461 ggctgatctt ctgggaactg cgccatccga gtccggtggt caatttccgg ccgttgcgag
     2521 aacggaattt cgccgcgtgc tgcatcatca ttttttgcgc ctatgccgtg ctttacgctt
     2581 ccagcaccgc cttgcctgcc ctgctgcagt cgctgttcgg ctacgatgca ctgagcgccg
     2641 gactggtcat gtcgccggcc ggattctttg ccctcgtcac catgccgttc gtgggccgcg
     2701 cgcttggccg cggaaccgat gcgcgatggg tgattgccgc gggcctgtt
//
LOCUS       DATAVD010001056         8942 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1962304, whole genome shotgun sequence.
ACCESSION   DATAVD010001056 DATAVD010000000
VERSION     DATAVD010001056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8942
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1962304"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..852)
                     /locus_tag="VHX39_20100"
     CDS             complement(<1..852)
                     /locus_tag="VHX39_20100"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3993484.1"
                     /translation="MPTESPLAALTRRARDDLARIAHPRAQWLEPWIAPDGQPALDVL
                     IVGGGQSGVAIASCLLRAMVTNILVVDRAPRGQEGPWLTYARMHTLRSPKDYTGPDLD
                     LPALGYQAWHEAKYGAADWQSLHRIARQYWADYLDWVRETVGVPVRNEVEVTDIEPAS
                     GGLLAVTARDGVVRFARKVVLATGQDGAGYWWMPDFVEALPEKFRAHAADPIDFSSLR
                     GRRVAVLGAGASAFDNAATALEAGAAEVVLFCRRHEPQVVQPYRWLTFAGFLRHLSDL
                     DDPWRWRF"
     gene            complement(1136..3352)
                     /gene="mdoH"
                     /locus_tag="VHX39_20105"
     CDS             complement(1136..3352)
                     /gene="mdoH"
                     /locus_tag="VHX39_20105"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis glucosyltransferase MdoH"
                     /protein_id="HEX3993485.1"
                     /translation="MDVLIGAGSIHAVPPDAPIEMATQSLRVAPDRPPRPASSPRGIG
                     LRRLLVIGGAVALTGLALWQMKLVLAANGLTPLAVIMLALFAILFAWIALSVVSGIAG
                     FIALVGGGGLGLGVGSGPLRAPDMATALLMPCYNESPVRVASGLQAIWESLHDAGLGQ
                     AFDIFILSDTTDPDVWVDEEAAFLELRRRTGSERIYYRRRRKNIARKAGNIADWVTRW
                     GGAYPQFLILDADSVMQAETLVRLVAAMEHHPDVGIIQTLPTITGGVTLFARSQQFAG
                     RVYGPLIAQGIAWWHGAEGNYWGHNALIRTSAFAERAGLPELSGPKPFGGHILSHDFV
                     EAALIRRAGWAVHMVPGLVGSYEASPPDLTELAARDRRWCQGNLQHLAVLPARGLHWV
                     SRLHLLTGIGAYITAPLWLLFLFAGILIALWDRLVPPDYFPAGKTLFPVWPVVDPVRA
                     MWMFVGTMGLLLIPKVLGCTAVLMNRAERRGCGGGTRLLISTLLETVIAGLIAPLMML
                     TQSIDVVSILFGRDSGWKPQRRDGGVPVFRDTVRRYRRHTILGFAMGITAWLVSPSLA
                     LWMSPVTVGLALAIPLVALTSRPVGVLTVLGLLRVPEESVTPVVLARAASVADELASA
                     GPEARPTSERLVHDPELLAAHREMLPQPRHPWIEPLEIPLLTGRALLEEAPSLAMAWE
                     RMTKEEQVACLADGPVLDLIVERAQEGVQPEAPELASAAARGLVPGSKMKRHRSSA"
     gene            complement(3340..4851)
                     /locus_tag="VHX39_20110"
     CDS             complement(3340..4851)
                     /locus_tag="VHX39_20110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0009250 - glucan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis protein G"
                     /protein_id="HEX3993486.1"
                     /translation="MRRRELLPLLAALGLAPAVADAANDPPPVSAFDAASVRNLAREL
                     ALKAYQPPDSKLPDELLNLKYSDYQTLRFDKSKALWRGDGGKFTVEFFHRGFLFKDRV
                     NVFEVVDGQARQIRYSTDMFNLDRLQTKPTDDLGFAGFRVHYPLNKPDVDDEVCAFLG
                     ASYFRAVARGQGYGLSARGLAIKTGDPGGEEFPLFKTFWLERPAKGSDVMVIHALLDS
                     PSAAAAFRFTLRPGAETDMDAEMALYPRVDLAQAGLAPMTSMFLFDATNRATFDDYRS
                     AVHDSHGLAMMSGKGERIWRALNNPKTLQISAFGDAGPRGFGLAQRERNFLDYQDLEA
                     VYEKRPSLWVEPLGDWGEGAVALVEIPSDREVNDNIVGFWRPRDKFAAKSEHILAYRL
                     HWCWEPMDDPSLAQVTQTRCGLSFDMKNRQFIIDFAGGSLKGRQNAEPPDIDVSADKG
                     HVHDATLQPMPGSQAWRLSFQLATGDEKAIELHARLLDSSRPITETWAYRWTS"
     gene            complement(5012..5806)
                     /locus_tag="VHX39_20115"
     CDS             complement(5012..5806)
                     /locus_tag="VHX39_20115"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX3993487.1"
                     /translation="MNLTSGLIGAEATGPIGWLIWDNPSKLNALSPGMSEDALNVIEA
                     YETDPRIKVVIMRGAGRKAFISGGDIKSFDQTRANAEAARLAREAPGKLRHKMLNLEK
                     PLIAMIYGYCLGGGLGMALNADLRFASSDAQFSVPAALRGIAYAPEGLKSLVDLVGPS
                     VAKDIMFSGRRLKTDEALRIGLINRVVDAETLESETIAYAETLAANAPLSIRASKYFI
                     NQLGLERAQRDEARMDAMQREAENSEDFKEATRSFVEKRKPVFHGR"
     gene            6870..>8942
                     /locus_tag="VHX39_20120"
     CDS             6870..>8942
                     /locus_tag="VHX39_20120"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3993488.1"
                     /translation="MSRDAARSFTGTVLRRLGLAGVIALMLSLPALWLGWEAEEAHAQ
                     AALLAEAGSARVQSALLDMFARFERATASLRAQDLQGDTVSLTGRLLRVEPLIAPATG
                     LSVINSRGLPVASSSVGTAAVSSPVWWFRPGALPPARQAVVTACGISDPEVSGWMLTR
                     GIDAVPEGSAGQVASNLSASALRTLVAPAVGSLDYRLRDADGCELLHVAGKVPAATTD
                     EPLVRLYYALLPGRWVMPAPVFSTVQAGNLSWAGTISPTAALGLRAAEIEQHARIILA
                     LLVAFGGLTCLLVVSEAVEPRWPRIAIASAMPPLHLPGETGQEMDDLREKLSAMAGER
                     DRVLAAIGHDVRTPMNAILGICALLLDGDLDEAQRKWLRRIRASCEALLAMLNGMLEI
                     AAARVDGAEIHREAIDIASLVEEVGDVLRPQAEDKGLDLIVAVEESVLGTWNTDSTRL
                     RQVMFNLCGNAIKYTVAGSVEIRALTERDKTGHEMLRLRVSDTGLGIAEDEREVIFEQ
                     FRRGRDEVSRGQEGLGLGLALCREIAALLGGRLTLDSMEGVGSVFTFEIPIEPAQTAG
                     ALGGPLAGRTALVVGLSEGVRRRVASHLESIGFDVETAGDGFMAIGLAERIAYQHGTL
                     DLMVLDAALVGLSADALLARLGASRPLEHLRTVLVANGAVASLMEGRANATVPHPVEA
                     RDLDHVVAD"
BASE COUNT         1673 a         2849 c         2775 g         1645 t
ORIGIN      
        1 gaaccgccag cgccatggat cgtcgagatc cgacaggtgg cgtagaaatc cggcaaaggt
       61 cagccaccga taaggctgca caacctgcgg ctcgtgccgc cggcaaaaca atacgacctc
      121 ggccgcacca gcctccagtg cggtcgcagc attatcgaac gccgaggcac ctgcacccaa
      181 cactgcaacg cgccgccctc gcaacgacga gaagtcgata ggatcggccg catgggcgcg
      241 gaacttctcc ggcagagctt ccacgaagtc cggcatccac cagtaaccgg cgccgtcttg
      301 cccggtcgcc aggacgacct tgcgggcaaa ccgcacaaca ccgtcccgcg cggtgaccgc
      361 caacaaacca ccagaggcgg gttcgatatc cgtgacctct acctcgttac gcaccggcac
      421 tccgaccgtc tcgcgtaccc agtccagata gtcagcccag tactggcggg cgatccggtg
      481 caacgattgc cagtcggcgg ccccgtactt cgcctcatgc catgcctgat accccaaagc
      541 cgggagatcg agatcgggcc ccgtgtaatc ctttggcgaa cgcaacgtgt gcatccgagc
      601 gtacgtcagc catggcccct cctggccacg cggcgctcga tccacgacca aaatgtttgt
      661 gaccatcgcc cgcaacaaac acgacgcgat cgcgacaccc gattggccac cgccgacaat
      721 caacacgtca agtgccggtt gcccgtcagg cgcaatccac ggctccagcc actgcgcgcg
      781 agggtgtgcg atacgggcga gatcatcacg cgcacgccgg gtcaacgcgg ccagggggct
      841 ttcggtcggc atccatcagt ctcccgaaga acggttcaaa ccaggcggtc gctcgcgtga
      901 gaggcttatc ggactgtccg tcattggccg ggacaaccgg ccgcgcagaa tcccacgcac
      961 ttgtcacgtt cgcttgaatg tcggttcgca cccagtgacc cgccctgaaa cagcgtcctc
     1021 tgtcagcaat cggtcgagcg gttaaaacag gcgcgtggac tgtggcgtcc aggttccacc
     1081 ttcgaagccg cggctggagt gacgcaaggc ggcgcccgcc gatgccctgc atcgtctaag
     1141 cactcgatcg atgccgtttc attttcgaac ccggcacaag gcccctcgcc gcggcggatg
     1201 cgagctcggg cgcttccggc tggacgccct cttgcgcacg ctcaacgata aggtccagta
     1261 ctgggccatc cgccaggcac gcaacttgct cttctttggt catgcgctcc caggccatcg
     1321 cgagagacgg agcttcttcc agcaacgccc gtccggtgag cagcggaatc tccaacggtt
     1381 cgatccacgg gtgccgcggc tgcggcagca tctcccggtg tgcagcaagc agctccggat
     1441 cgtgcaccag ccgctctgaa gttggacgcg cctctggacc agccgacgcc aactcatccg
     1501 ccaccgatgc agcacgcgcc aacactacgg gcgtaacgga ttcctcggga acacgcagca
     1561 agcccagaac ggtgagtacc ccaacgggcc ggctggtcag cgcaaccagc gggatcgcca
     1621 atgcaaggcc gacggtgacc ggcgacatcc acaacgccag agacggcgac acaagccagg
     1681 ccgtgatgcc catcgcaaaa cccagtatcg tgtggcgtcg gtaccggcgc acggtatctc
     1741 tgaacaccgg aacgccgcca tcgcgccgct gcggcttcca acccgaatca cggccgaaaa
     1801 ggatcgagac cacgtcgatg gactgagtaa gcatcatgag gggcgcgatc aggccggcga
     1861 tcacggtctc gagcagcgtg ctgatcagca ggcgagtacc gccaccgcag cctcgccgct
     1921 cggcccgatt catcagcacg gcggtgcaac ccagaacttt gggtatcagc agcagtccca
     1981 ttgtgccgac gaacatccac atggcccgga cgggatcgac caccggccaa accgggaaca
     2041 acgtctttcc ggccgggaaa taatccgggg ggaccagccg atcccagagc gcgatcagta
     2101 tgccggcgaa tagaaacagc agccacaacg gcgcagtgat gtacgcccca atgccggtca
     2161 gcaaatgcag tcggctgacc cagtgcaatc cgcgcgccgg caacaccgca aggtgctgta
     2221 aattgccttg gcaccagcgc cggtcgcgtg ccgccagctc ggtcagatcg ggcgggcttg
     2281 cctcgtagct gccaacgagg cccggaacca tgtggaccgc ccaaccggcc cgccggatga
     2341 gcgcggcttc gacaaaatcg tggctaagga tgtgaccgcc gaatggtttc ggtcctgaca
     2401 gctccggcaa tccggcacgt tctgcgaatg cactcgtacg gatcagggcg ttgtggcccc
     2461 agtaattgcc ttctgcgcca tgccaccagg caataccctg agcgatcaga gggccataaa
     2521 cgcggccggc aaattgctgt gacctggcga acagagtgac cccgccggta atggttggaa
     2581 gggtttgtat gatcccaacg tccggatgat gttccattgc cgccaccaac ctgaccaagg
     2641 tctccgcctg catgacgctg tcggcatcga ggatcaggaa ctgcggataa gcgccgcccc
     2701 aacgtgtcac ccaatcggcg atattgccgg ccttgcgagc gatgttcttc ctccgccggc
     2761 gatagtagat acgctccgac ccggtgcgcc tgcgaagctc aaggaatgcc gcttcctcgt
     2821 cgacccacac gtcgggatcc gtcgtgtcgc ttagaatgaa gatgtcgaac gcctggccca
     2881 gaccggcatc gtgcagcgac tcccagatcg cctgcagtcc ggacgccaca cgcactgggc
     2941 tttcgttgta gcatggcatc aacagggccg tggccatgtc aggcgcccga agtggcccgg
     3001 agccgacacc aagtcccagg ccgccgccgc caaccagtgc gatgaaaccg gcgatgccac
     3061 tcaccacgga cagcgcgatc caggcaaaca ggattgcgaa cagcgcgagc atgataacgg
     3121 ccagaggtgt caggccattt gccgccagga ccagtttcat ctgccagagt gcgagtccgg
     3181 tcagggcgac tgcgccgccg atcaccagca gccgacgcag accaatgccg cggggtgatg
     3241 acgccggtcg tggcggacgg tctggtgcca cgcgcagcga ttgcgtggcc atctcgattg
     3301 gtgcatcggg cggaacggcg tggatactgc cggcgccgat caggacgtcc atcgatacgc
     3361 ccaggtctcg gtgatcggac ggctggagtc gagcaatctc gcgtgcagct cgatcgcctt
     3421 ctcgtcgccg gtggcgagct ggaaggacag ccgccatgcc tggctgcccg gcatcggctg
     3481 caacgtggca tcgtggacat gtcccttgtc ggcgctgaca tcgatatcag gcggttcggc
     3541 attctgccgc cccttcagag aacctcctgc gaaatcaatg ataaattgtc gattcttcat
     3601 gtcgaatgac aggccgcaac gagtctgggt cacctgcgcc aacgacggat cgtccattgg
     3661 ttcccagcac caatgcaggc gataggcgag gatgtgctcg cttttggcgg caaatttgtc
     3721 tcttggccgc cagaaaccga cgatgttgtc gttgacttcg cgatcgctgg ggatctcgac
     3781 cagtgcaacc gcaccctccc cccagtcacc gagcggctcc acccataggc tggggcgttt
     3841 ttcgtagact gcctcgagat cctggtagtc aaggaagttg cgctccctct gagcgaggcc
     3901 aaatccacgc gggccagcgt ccccgaacgc actgatctgc agcgttttcg gattgttcag
     3961 ggcgcgccag atgcgctcgc ccttgccgct catcatggcc agaccatgcg aatcgtgcac
     4021 ggcacttctg tagtcgtcga aggtggcccg gttggtcgcg tcgaacagaa acatactggt
     4081 catcggtgca agccctgcct gggcaagatc aacccgaggg tacaacgcca tctccgcgtc
     4141 catgtcagtc tccgcacccg gccgcagcgt gaaacgaaac gctgcggcgg cgctcgggct
     4201 gtccagcagc gcgtggatca ccatcacgtc gctgcctttg gctggtcgtt cgagccaaaa
     4261 cgtcttgaac aacggaaatt cttcacctcc gggatcgccg gtcttgatcg cgaggccacg
     4321 cgccgaaagc ccatagccct gaccgcgcgc gaccgcgcgg aaatagctgg cgccaagaaa
     4381 cgcacagacc tcatcgtcaa cgtcaggctt attgagcgga taatgtacgc gaaatcccgc
     4441 gaaaccgagg tcgtcggttg gcttcgtctg cagcctgtca aggttgaaca tgtcggtact
     4501 gtagcggatt tgccgcgcct gaccgtcaac cacttcgaac acattgacgc ggtccttgaa
     4561 cagaaagccg cgatggaaga attccacggt gaacttgcca ccatcgccgc gccagagcgc
     4621 tttgctctta tcgaagcgca acgtctgata gtccgagtac ttaagattga ggagttcgtc
     4681 cggcagtttg ctgtcgggtg gctgatacgc cttcaatgcc agctcacgcg caagattgcg
     4741 cacgctggca gcgtcgaacg cgctgaccgg gggcgggtcg ttggcggcgt cggcaaccgc
     4801 gggcgcgagg ccaagcgctg ccaaaagtgg caatagctca cgtcggcgca tgcgaccgca
     4861 gctcccctca tttcgaggag ttaatgcggc accgccgcat cggttgcatc gcaatcgccc
     4921 cagccgttcg attggcgtca atccgcctgg cgtggactga ggattagctg gcggatcggc
     4981 tcaggttgcg cgccggtcca cgcgggtaac gttaccggcc gtgaaagacc ggcttgcgct
     5041 tttccacgaa cgaccgggtc gcttccttga aatcctcgct gttttcagcc tcgcgttgca
     5101 tggcgtccat gcgtgcctcg tcgcgttgtg cacgctccag gcccagttgg ttgataaagt
     5161 attttgacgc cctgatggac agcggcgcgt ttgccgcgag ggtttcggcg taggcgatcg
     5221 tctcactctc cagtgtttcg gcgtcgacga cgcgattgat caggccaatc cgcaacgctt
     5281 catccgtctt gagccgccgg ccggagaaca tgatgtcctt ggcgacgctc ggtccgacca
     5341 gatcgaccaa ggatttcagc ccctccggcg cataggcgat gccgcgcaac gcagccggca
     5401 cgctgaactg cgcatccgag gaggcaaagc gcaggtcggc attcagcgcc atgccaaggc
     5461 cgccaccgag gcaatagcca tagatcatcg cgatcagcgg tttttccagg ttaagcatct
     5521 tgtggcgcaa tttgcctggc gcctcgcgcg ccaaccgcgc agcctcggca ttggcgcggg
     5581 tctggtcgaa actcttgata tcgccgccgg agatgaaagc tttcctgccg gcaccccgca
     5641 taatcacgac cttgatgcgg gggtcggtct cgtaggcctc gatcacgttg agcgcgtcct
     5701 ccgacatgcc tggcgagagg gcgttcagct tgctgggatt gtcccagatc agccatccaa
     5761 tggggccggt tgcttccgcg ccgatcagtc cggatgtcag gttcatcgcg ttatggtgcc
     5821 ttctggtgaa ttcggaggaa cgattcccgc atgattacgc cgaggtggcg gaatcttcaa
     5881 aacggcgcgc cccggttcga tccaaacgaa ccggctgcag tgccgcccgc gtgctgctgg
     5941 ttgccttgcc gaagccgagc ggcgcggaac caacgctggt cgatcgtcgc tttggctcga
     6001 cctcggcatt ccacttacca tggacgagac ggttgagcgg gatgcactgg gatggcggaa
     6061 gattcgaagc cattttaacc ggaaatcaat gcggtgaacg gcataactcg ccgctgtcgc
     6121 actttggaag cggatggcag accggacagg ttccaagcga tgcgagagaa ttgattggct
     6181 tcatggaaca aacgccacct ggaagtctgt tgaatgaggt ttgcgctact caaactgatt
     6241 gtgccgggcg cgttggtgct gtcacttgcc gcctgcgaaa agtcgcctgc gccggtcgcc
     6301 gtcgtaccac ctcccccgcc agcgcctccg ccaccgattc accggcccgt taccgctgcc
     6361 tggaactttc acagtggtga cgtttgcacc gcgtcggctt ccggcggccc gcttgccctg
     6421 gacgtgaccg catcaagcag cttgttgacg ctgaacgccc gaatggggcg gggcatgcca
     6481 attccagccg gccgatcggt gacgattgat tttgtcggaa cggccggcaa ctggaccgta
     6541 tccggccgca aatctgcctc acatcgggtg accgcgtccc agcccatgac cgaggatcag
     6601 gccggccgga tcctcgtctt gttggaaggt ggcgtcgtac gagttggcag gccgaacgag
     6661 ggcttgccgc cgcttcaggt gcccaacagc gggccgcccg gacgtgactg gttcgaatgc
     6721 gtgcgtcggc agctgtttcc gtaacggttc tattttgccg ggatgacggt atccacgctt
     6781 ccgttgaagt ttggttaacg aatttgtgcc ttcaatggtg ttcccgcacc ggccgtaaaa
     6841 ccaggccgtg acgcgaccgg aggcccataa tgagccgcga cgccgcacgt tcgtttaccg
     6901 gaacggtcct tcgccgtctc ggtctcgcag gcgtgattgc attaatgctt tcgctcccgg
     6961 ccctctggct ggggtgggag gccgaggaag cgcacgccca ggcggcattg ctggctgagg
     7021 caggatctgc acgtgttcaa agtgcactgt tggatatgtt cgcccgattc gagcgtgcca
     7081 ctgcttcgct gcgggcgcag gatttgcagg gcgacacggt ttcgctcacc ggccgattgc
     7141 tacgcgtgga gccactgatc gctccggcca ccggcttgtc agtgatcaat agccggggct
     7201 tgccagtcgc ttcatcgtcg gtcgggaccg ccgcggtcag ctctccggtt tggtggttcc
     7261 ggcccggtgc actgccgccg gcacgccagg cggtcgtgac ggcttgcggg atttcagatc
     7321 cggaggtgtc gggttggatg ctgacgcgcg gtatcgacgc cgttccggaa gggtctgcag
     7381 gccaggtggc cagcaacctg tcggcctctg cgttgcggac tttggttgcc cctgccgtcg
     7441 gctccctcga ctaccggtta cgcgacgcgg acggatgtga gttgctgcat gtcgccggaa
     7501 aggtaccagc cgcgaccacg gacgagccgc tggttcgtct gtactacgcc ttgctgcccg
     7561 ggcgatgggt catgcccgcg ccggtcttct cgaccgtcca ggccggaaac ctgagctggg
     7621 ccggcacaat cagcccaacg gccgcgctcg gactgcgggc ggccgagatc gaacagcacg
     7681 ccaggatcat ccttgctctg ctcgtggcat tcggcggcct gacatgtctg ttggttgtct
     7741 cggaggcggt agaaccacgg tggcccagga tcgccatcgc ttccgcaatg ccgcctttgc
     7801 acctgcctgg tgagactggc caggagatgg atgacctgcg cgagaagctc agcgcgatgg
     7861 ctggcgaacg ggatcgcgtg cttgctgcga tcggccatga tgtgcgcacc ccgatgaacg
     7921 caatcctggg catttgcgcg ctgctgctgg acggcgacct tgacgaagca cagcgcaaat
     7981 ggctgcggcg tattcgggcg agctgcgaag cgttgctcgc gatgctcaac ggcatgctcg
     8041 agattgccgc ggcccgcgtg gatggcgccg agatccatcg tgaggccatc gatatcgcga
     8101 gcctcgtcga ggaagtgggc gacgtgctgc ggccgcaggc ggaagacaag ggcctcgatc
     8161 tgattgtcgc cgttgaagaa agtgtacttg gtacgtggaa caccgattcg acccggcttc
     8221 gccaggtgat gttcaatctc tgtggcaacg ccatcaaata cacggtggcg ggctcggttg
     8281 agatccgggc actgaccgaa cgcgacaaaa ccggacatga gatgcttcgc ttgcgggtct
     8341 ccgacacagg acttggcatc gcggaggatg aacgcgaggt tattttcgag cagttccgaa
     8401 ggggccgcga tgaggtctct cgcggtcagg aaggcctcgg gctgggcctc gcgctgtgcc
     8461 gcgaaatcgc tgcgctgctc ggcggtagac tgacgttgga cagcatggaa ggcgtcggca
     8521 gcgttttcac cttcgagatt cctatcgagc cggcgcagac cgcaggtgca cttggtggtc
     8581 cgctggcggg tcgcaccgct ctcgtggttg gcctgtcgga aggcgttcgc cgtcgtgtcg
     8641 cctcacacct cgaaagtatc gggttcgatg tcgaaacggc cggcgacggc ttcatggcca
     8701 tcggcctggc ggaacggatc gcctatcaac acggcaccct tgacctgatg gtgctcgacg
     8761 cggcgttggt cggactgtcc gcggacgcat tgttggcgcg tctgggcgcc agtcggccgc
     8821 ttgagcacct gcggacggtg ctggtcgcca atggcgcggt cgccagcttg atggagggtc
     8881 gagccaacgc caccgtaccg catccagttg aagcgcgcga cctggatcat gttgtggccg
     8941 ac
//
LOCUS       DATAVD010001057         2528 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3078029, whole genome shotgun sequence.
ACCESSION   DATAVD010001057 DATAVD010000000
VERSION     DATAVD010001057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3078029"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1150)
                     /locus_tag="VHX39_20125"
     CDS             complement(<1..1150)
                     /locus_tag="VHX39_20125"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3993489.1"
                     /translation="MLLLQRAKQETDLCMRFELFVASRYLRAKRRQAVVGVITVISII
                     GVAAGVASLILALAITNGMQRDLQKQLLGSTAQVELMRVASDGIENWRPLVQRLRHLP
                     HVTAAAPGLYGQVLISRGARSGGALIKGILPADERTVSNLLNNIKQGSAATLAPVPAT
                     NPNGSSSAPPPLVLGSDLADQIGAGVGDTVLVTSPQGELTPFGLVPKYERFQVVAIFH
                     SGFYQYDSSFALARLTDVQHLFGEPNIVSVIGFKVDDLYHADRIGHEIEQAAGKGFMT
                     TNWMEQNRELFRALRLEQVVTFIVIGLIVCVAALNILIALTMMVMEKTRDIAVLMSYG
                     VRPSQVRRIFVWQGMLIGILGTTIGLVLGYALAWFGGHYRIIHLSAAVY"
     gene            complement(1239..>2528)
                     /locus_tag="VHX39_20130"
     CDS             complement(1239..>2528)
                     /locus_tag="VHX39_20130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HEX3993490.1"
                     /translation="ELWKSQHDVIYALAWQQQENGPSGLLAGSGNQGHLYRISTDGTY
                     ADLAHLEGSQTTALAFDGNTLYAATSNTGKLYRLAPPGSPGKQSSSYVSTIADAKFIS
                     QWGRAQLRGSGHVDLFARVGNIEQPTEGWSDWLPVTPGAEPPHFPRARFMQWKAVFQP
                     GASLRDVGFYYLPQNVAPVVDDIVVELHARVVPGINQEAQITPVQINFPADSTDGVVY
                     DLQSSTPTLMALRTPDWATARWKAHDDNGDHLSYSVYYRGDDEANWQLLKKDLRTTYL
                     SFDLRRIPDGHYTLRVVASDAPSHLAGNALTGFMDSDHFLLDTMPPVVSPLRATLGSS
                     PAAAIHVTFDAQDKFSTIERAYYSVDAGPWQYVEPVGQLSDSSQEHYDFTVPVPKPDA
                     STDTPAAVQPTDPQQHILAVRVLNRAGNVATAKAIVQ"
BASE COUNT          520 a          709 c          837 g          462 t
ORIGIN      
        1 agtacaccgc cgccgacaga tgaatgatgc ggtagtgacc gccgaaccag gccagcgcgt
       61 agcccaaaac caatccgatg gtcgtgccaa gaataccgat aagcatcccc tgccacacaa
      121 agatgcgccg cacctgcgac ggccgcacgc cataggacat caacacggca atgtcgcggg
      181 tcttttccat gaccatcatg gtgagggcga tgagaatgtt gagcgcggcc acgcagacga
      241 tgaggccgat cacgataaag gtgacgacct gttcgagccg cagggcgcgg aacagctcgc
      301 gattctgctc catccagttg gtagtcataa agcctttgcc cgcggcctgt tcaatttcgt
      361 gcccaatgcg gtcggcgtgg tagagatcat ccaccttgaa gccgatgacg gagacgatgt
      421 tgggttcgcc gaacaagtgc tgcacatcgg tgagccgcgc cagcgcgaag gaagagtcgt
      481 attggtagaa gccggaatga aagatggcca cgacttgaaa gcgttcatac ttcggcacca
      541 ggccgaaggg cgtcaattct ccctgggggc tggtgacgag aacggtatcg ccgacgccgg
      601 cgccaatctg gtcggcaagg tcagagccca gcaccagcgg cggaggagcg ctggaggagc
      661 cattggggtt ggttgcagga actggggcca acgtggccgc gctgccctgc ttgatgttat
      721 tgagcaagtt gctgacggtg cgttcgtctg ccggcagaat gcctttgatg agcgcgccgc
      781 cggagcgcgc gccgcgcgaa atcaacacct ggccatacag gcccggagcg gcagcggtga
      841 cgtgcggcag atgacgcagg cgctggacca ggggacgcca gttctcgatg ccgtcgctgg
      901 cgactcgcat caattccacc tgggcggtgg aaccgagcaa ctgtttttgc agatcgcgct
      961 gcatgccgtt ggtgatggcc agagcgagga tcagcgaggc cacgcccgcg gcgactccga
     1021 taatggagat aacggtgatg acgccgacaa cagcctggcg gcgcttggca cgcaggtaac
     1081 ggctggcgac aaaaagttca aagcgcatac agaggtccgt ttcttgcttc gcgcgttgca
     1141 ggagcagcat cccagttacg aaaatgcgga cgttgttcta ccccaccgaa gccgacaacg
     1201 gcttgaatgg gccactctcc cgcgtcacgt cttcacaact actgaacgat cgccttggcc
     1261 gtggccacat tgccggcacg gttcaagacc cgcactgcca atatatgttg ttgcggatcg
     1321 gtcggctgca cggcagcggg cgtatcggtc gaggcatctg gtttgggaac aggcacggtg
     1381 aagtcgtaat gttcctggct ggaatcgctg agctggccca ccggttccac atattgccac
     1441 gggcccgcat ccaccgaata gtaggcgcgc tcaatggtgg aaaacttgtc ctgggcatcg
     1501 aaggtgacat ggatcgcggc cgcaggagaa gaacccaacg tggcgcgcag cggggaaacc
     1561 accggcggca tggtgtcgag cagaaaatga tcgctgtcca tgaatccggt gagcgcattt
     1621 ccagccagat gcgaaggcgc atcgctggcg actacgcgca gcgtgtaatg gccgtcggga
     1681 atgcgtcgca ggtcgaacga gagataggtg gtgcgcaggt ctttcttcag cagttgccag
     1741 ttggcttcat cgtcgccgcg gtaatagacg gaataactga gatggtcgcc gttgtcatcg
     1801 tgcgctttcc atctggcagt agcccagtcg ggcgtgcgca gagccatcag cgtgggagtg
     1861 ctcgactgca ggtcgtacac tacgccgtcg gttgagtcgg cggggaaatt gatctgcacg
     1921 ggcgtgatct gcgcttcctg attgatgccg ggaacgacgc gcgcgtgcag ctcgactacg
     1981 atgtcgtcca ctacgggagc gacattctgc ggcaggtaat agaagccgac gtcgcgcaaa
     2041 gatgcgccgg gctggaagac ggccttccat tgcatgaagc gggcccgggg gaagtgcggc
     2101 ggctcggcgc cgggagtgac cggcagccaa tcgctccagc cttcggtggg ctgctcaatg
     2161 ttgccgacgc gcgcgaacag atcgacgtgg ccgctgccgc gcaactgggc gcgtccccac
     2221 tgggagatga atttcgcatc cgcaatggtg ctgacgtagg aggaactttg cttgccggga
     2281 gaaccgggcg gcgccagccg atacagcttg ccggtattgc tggtggcggc gtagagggtg
     2341 ttgccgtcga aggctaacgc agtggtctgc gaaccttcga gatgcgccag gtcggcatag
     2401 gtgccgtcag tggaaatgcg atagagatga ccctgattgc cgctgccggc gaggagaccg
     2461 ctggggccgt tttcctgctg ttgccaggcc agcgcataga tgacatcgtg ctgcgatttc
     2521 caaagttc
//
LOCUS       DATAVD010001058         1854 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_660820, whole genome shotgun sequence.
ACCESSION   DATAVD010001058 DATAVD010000000
VERSION     DATAVD010001058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1854)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1854)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1854
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_660820"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(449..1402)
                     /locus_tag="VHX39_20135"
     CDS             complement(449..1402)
                     /locus_tag="VHX39_20135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013635008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SWIM zinc finger family protein"
                     /protein_id="HEX3993491.1"
                     /translation="MESYRDYESRLPRGRTYVRNGSVVDLQIASGRITALVSGSELYS
                     VTITIKETVKTQWETICADCAGGIDSLVELLQGRLSRGVMERLCRQENGLFPRPSDIR
                     FSCSCPDHALMCKHVAAVLYGVAARLDYKPELLFRLRAVDETDLVTQINTDPLISKKG
                     SDKVLQADDMSALFGLDMAPEPEARRLSDDLKQSEVRGTIPGAQTAVAAPIASRTASP
                     RLIGVPRQASAAQQPSTKSSVSKKSETKARKASDKIVVPKQKETTLHDNSTRSTPPTK
                     AVVAKLSAKLVGLEKGLIGKRRQPKTQNKKRLKSGLSKQAR"
     gene            complement(1579..>1854)
                     /locus_tag="VHX39_20140"
     CDS             complement(1579..>1854)
                     /locus_tag="VHX39_20140"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013635007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX3993492.1"
                     /translation="SHVVHFDRWWNPAVENQATDRAFRIGQKKNVLVHKFVCRGTLEE
                     RIDAMIEAKQGLSDALLAGSSEINLTEMTDEAILQLVALDLNSTMKD"
BASE COUNT          373 a          576 c          479 g          426 t
ORIGIN      
        1 ccgaggttga tgcgactaag tcggcggctt cacgagatcc ccatttagcg acatgatgtg
       61 tgaatgtcac ttggctcggt ttatcgccgc attcgcgaca cgccatccgg tcgatcagct
      121 gccggaaggt cagattgccc catcgctccg ataggtcgtg acggtcgtac ggcgctgatc
      181 agcacatgtc gagcaagcga tcaccatcgc gaagccttcg aaggcccgaa cctgtcgata
      241 taggatcttg gcttccgtcg cagccttcgc ttccacgatc tcgtcccgtt cgcccgcatc
      301 ctcgcctacg acgtgacgcg cgaacagtgg gcgcagcttg acgccttgct ggtcgcaggc
      361 gagggaggcc ggcccagtaa cagaacattc caaagtccca ccgaattttc gttacaagcg
      421 ttgtagataa tcgatggcgg tgacacgttt atctcgcctg ctttgacaag ccgctcttga
      481 gcctcttctt gttttgggtc tttggctgcc gtcgtttccc gattagaccc ttctccaagc
      541 caaccagttt ggcggacaat ttcgcgacta cggctttcgt cggaggggtt gatcttgttg
      601 aattgtcatg cagtgttgtc tctttctgtt tcggaacaac gatcttatcg gaagcttttc
      661 tagctttagt ctcggacttc ttcgaaacag acgacttagt ggatggctgc tgcgcggcgg
      721 atgcctgccg cggcacacca atcagccggg gagatgccgt cctcgatgcg attggcgcag
      781 cgaccgccgt ctgtgctcct ggtatcgtgc cccgcacctc cgactgcttg agatcgtcag
      841 acagccgtct tgcctccggt tctggcgcca tatcgagtcc aaacaacgca gacatgtcgt
      901 cagcctgcag taccttatcg cttcccttct tcgatatcag cggatcagta ttgatctgag
      961 tcaccaagtc agtctcatcc accgcccgca aacgaaacaa tagttccggt ttgtaatcga
     1021 gccgcgcagc gacgccatac agcaccgctg ccacgtgctt gcacatcaac gcatggtctg
     1081 ggcagctaca agagaagcgg atatccgacg gccgcggaaa caggccgttc tcttgccgac
     1141 agaggcgctc catgacgcct ctggaaagcc gcccctgcag tagctcaacc aaggaatcga
     1201 tgcccccggc gcagtcggcg caaatcgttt cccattgtgt cttcaccgtc tccttgatgg
     1261 taatggtgac gctgtagagt tccgacccac tgaccagagc cgtgatccga cccgacgcaa
     1321 tctgcagatc gacgactgat ccgttccgga cataggtacg cccgcgcggc aaacgactct
     1381 cgtagtcgcg gtagctttcc atgttgtcac accacgcacg cccccagaac gttgtggcaa
     1441 tgaggcgtcc cgcaatcatc actggctcca caggagggcc tgccctgcgc aacttcccga
     1501 ccgcgcgttc ggctctgcgc cgccgttcgg cagcgggaat gtagggcgcc catccctcat
     1561 agtaccgtgc catcgacctc aatccttcat agtagaattc aaatcgagag cgactagttg
     1621 cagaatcgct tcatccgtca tttcggtcaa attgatctca ctactaccgg ccagcaaagc
     1681 atccgacaaa ccctgctttg cttcgatcat ggcatcgatc ctttcctcga gcgtaccgcg
     1741 gcagacaaat ttgtgcacca gaacattctt cttttgtcca atgcggaagg cccggtcggt
     1801 tgcttggttc tccacagcgg gattccacca gcgatcgaaa tgcaccacat ggga
//
LOCUS       DATAVD010001059         2562 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_104151, whole genome shotgun sequence.
ACCESSION   DATAVD010001059 DATAVD010000000
VERSION     DATAVD010001059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2562
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104151"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..976)
                     /locus_tag="VHX39_20145"
     CDS             complement(<1..976)
                     /locus_tag="VHX39_20145"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3993493.1"
                     /translation="MNDTAPPAVSESSDREPVHWRLSLWSMVAVQFIMSVAFGIVGPI
                     MPLYLPELGVVSPAAVNMWAGVLTSATSCVAIFTSPMWGGLADRYGRKLMVLRSTLGI
                     AVFTFLMGIAQGPWQMLGLRAGMGALAGFSSASVVMVASSVPERRLGYSLGWMSTGQL
                     VGSLVGPLVGGGLADLTGSYRVPFYFGGVICFAGFVVTLLFVPERFTPPDASKARPSL
                     ISGFRMVIGSGGLMAVIMVMMMGQFSTMAVLPVVTLYVREILGSRPDIATLGGLAFSA
                     TGLAGVLAVPFLGKRSDRIGYRRTLLICLFGAALFTLPMALPLGYWPFV"
     gene            1144..1659
                     /locus_tag="VHX39_20150"
     CDS             1144..1659
                     /locus_tag="VHX39_20150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010665912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor
                     SspB"
                     /protein_id="HEX3993494.1"
                     /translation="MEDDPQQQVESLLPYERWIAAALRHVVAQAIDHVSQHGLPGGHH
                     FYISFRTTYPGVVIPPRLRAQYPEEMTIVLQHQFWDLKLDDEARTISVGLSFGGVPST
                     LVIPLDALISFADPQIRYALRFEPVEPEVKTTALAAVPRVPDSEPDAEAAPAPQVVSL
                     DAFRRRPPPKS"
     gene            1685..>2562
                     /locus_tag="VHX39_20155"
     CDS             1685..>2562
                     /locus_tag="VHX39_20155"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HEX3993495.1"
                     /translation="MVRPSGFLYSPMFPLGPDQTPWKKLAIEGVRTATCDGAAVLRIT
                     PEALSELAVRAFHDVSHLLRPAHLASLRAILDDPEASANDRFVALDLLKNANIAAGGV
                     LPMCQDTGTAIVFGKKGQRVWVDGDEEEALAWGVHRTYTETNLRYSQMAPLTMFDEVN
                     TGNNLPVQFDIMAAPGEHHADEFHLMFVAKGGGSANKSFLFQETRAILSPDRLLKFLE
                     TKMKTLGTSACPPYHLAIVIGGTSAEATLKTVKLASTKWLDALPTSGSKAGHAFRDLE
                     MEQKVLELSRNIGIGA"
BASE COUNT          579 a          815 c          735 g          433 t
ORIGIN      
        1 gcacgaacgg ccagtagcca aggggtaatg ccattggcaa cgtgaacagc gcggcaccga
       61 acaagcaaat cagcagagtc cggcggtaac cgatccgatc gctccgcttg ccaagaaatg
      121 gcaccgccaa cactcctgca aggccggtcg cggaaaacgc caggccgccc aacgtcgcaa
      181 tgtccggccg cgagcccaga atttcacgta catagagcgt cacgaccggc agcacggcca
      241 tcgtcgagaa ctgacccatc atcatcacca tgatgaccgc catcagcccg ccggaaccaa
      301 tcaccatacg aaacccggaa atcaacgacg gcctggcctt gctcgcgtcc ggcggcgtga
      361 aacgctccgg cacgaaaagc aatgtcacca caaacccggc aaagcagatc acgccaccga
      421 aataaaacgg cacccggtag ctgccggtca ggtcggcgag cccgccgccc accagtggcc
      481 cgaccaacga accgaccagt tggcccgtgc tcatccagcc cagggaatag ccgagccgcc
      541 gctccgggac ggaggatgcc accatcacga ctgatgccga gctgaacccc gccaacgccc
      601 ccatcccggc ccgcaatccc agcatctgcc acggtccctg ggcgatcccc atcaggaacg
      661 tgaagactgc aatcccaaga gtcgagcgca gtaccatcaa tttgcggcca tagcggtctg
      721 ccagcccgcc ccacattggt gacgtgaaga tcgccacaca agacgttgcg gaggtgagca
      781 cgcccgccca catattcacc gccgccggcg aaacgacgcc gagttccggg aggtacagcg
      841 gcatgatcgg accaacgata ccgaatgcaa cactcatgat gaattgcacc gcgaccatgc
      901 tccacaggga caatcgccaa tgcacgggct ccctgtcgct ggattcactg acggctggcg
      961 gcgcggtgtc gttcattcgc atcaccattg gcgcacgccg gtgagctgtc aaaagccagc
     1021 ctgcaacgcg tgtctgtcat cgggctggat cgggtccgaa aagcccggga atcaagtggg
     1081 cagaccgctt tgcctcacgc gcgacgtcgc gctatgaatt gatcgggaac aagaggttcg
     1141 tgaatggaag atgatcccca gcagcaggtc gaaagtttgc tgccctatga acgctggatt
     1201 gccgccgcgc tgcgccacgt cgtagcgcag gcgatcgacc atgtgtcaca gcacggactg
     1261 cccggtggac accattttta tatctccttc cgtaccacct atcctggggt cgtgatccca
     1321 ccccgattac gcgcccaata ccccgaggaa atgacgattg tcctgcaaca tcagttctgg
     1381 gacctgaaac tcgacgacga ggcacggacc atcagtgtcg gattgtcgtt tggtggggtg
     1441 ccttcgacgc tggtgatccc gttggacgca ttgatctcgt ttgccgatcc gcaaattcgc
     1501 tatgccttgc gcttcgaacc ggttgaacca gaagtgaaaa ccaccgccct ggcagcggtc
     1561 ccccgcgtac cggactccga gccggacgca gaggcagcgc cagcgcctca ggtggttagc
     1621 ctggacgcat tccgacgccg tccgccgccc aagagttgag gagattattc gtttgaacgc
     1681 accgatggtc cggccatccg gattcctcta ctcacccatg tttccccttg gcccagatca
     1741 gacgccgtgg aaaaaactgg ccatcgaagg tgtccgcaca gcgacgtgcg atggagcggc
     1801 ggtgctccga attaccccgg aggcgctaag cgaactggcg gtacgggcat tccacgacgt
     1861 gtcgcatttg ctgcggccgg cgcacctcgc gtcattgcgc gcaatcctgg acgatccgga
     1921 ggcgagcgcg aatgacaggt tcgtcgcgct cgatctgttg aaaaatgcca acatcgcggc
     1981 cggcggcgtg ctgcctatgt gtcaggacac cgggaccgca atcgtgttcg gcaaaaaggg
     2041 ccagcgcgtc tgggtcgatg gcgatgagga ggaggcgctc gcctggggtg tgcaccgcac
     2101 ctacaccgaa accaatttgc gctactcgca aatggctccg ctgaccatgt ttgacgaggt
     2161 gaataccggc aacaacctac cggtgcaatt cgacatcatg gcagcgcccg gcgaacatca
     2221 cgccgacgaa ttccatctga tgttcgtggc caaaggcggt ggctcggcga acaagagttt
     2281 tctgttccag gagacacgcg caattctgtc gccggaccgg ctgctgaaat tccttgaaac
     2341 gaagatgaag acgctaggga catcggcatg tccgccatat cacctggcga tcgtgatcgg
     2401 tggcaccagc gcagaagcga cattgaaaac cgtcaagctg gcatcgacga agtggctgga
     2461 tgcgctaccc acgtcaggca gtaaggcggg ccatgcattc cgtgacctgg aaatggaaca
     2521 gaaggtcctg gaactgtctc gtaatattgg tatcggtgca ca
//
LOCUS       DATAVD010001060         3053 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2149165, whole genome shotgun sequence.
ACCESSION   DATAVD010001060 DATAVD010000000
VERSION     DATAVD010001060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3053
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2149165"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..163
                     /locus_tag="VHX39_20160"
     CDS             <1..163
                     /locus_tag="VHX39_20160"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389944.1"
                     /note="with CysN catalyzes the formation of
                     adenylylsulfate from sulfate and ATP; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sulfate adenylyltransferase small subunit"
                     /protein_id="HEX3993496.1"
                     /translation="GCYPLSAAVESAAGTIDEIVAEMRTTKVSERAGRLIDQEQGASM
                     ERKKREGYF"
     gene            163..2004
                     /gene="cysC"
                     /locus_tag="VHX39_20165"
     CDS             163..2004
                     /gene="cysC"
                     /locus_tag="VHX39_20165"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004020 - adenylylsulfate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HEX3993497.1"
                     /translation="MPESLLRVLTCGSVDDGKSTLIGRLLFECRSIPDDVMVALERDS
                     IRFGTVEGSVDYALLVDGLEAEREQGVTIDVAYRFFETPRRRFILADTPGHQQYTRNM
                     ATGASTADLAILLVDARNGLLDQTRRHAAIASLLGIRAVVLAINKMDLVGFDKTVFDG
                     IVAGFDQLRNRLEDISVTAIPICARDGDNVTRSSARMPWYTGTTLLAALENAEPAART
                     NGHKFRFPVQYVSRPDQSFRGYAGTISSGTIRVGDKLANVASRTKAKVARIVTMDGDL
                     ETADTGQPVTLVLDREIDVSRGDVLAADPSPTVADQINAWVVWMDETPLFRGRAYQFM
                     LGTKMVTGTITDITNRLDIDTLREIGVRELHLNEIGRVAISLSHPVVCEPYSQSRDLG
                     GFILVDRLTMGTVGAGMITDVRAGRTNVYWHQMDVSKQARAGLNRQKPAVLWFTGLSG
                     AGKSTIANIVEKQLLAQGHHTMTLDGDNVRHGLNRDLGFTEADRVENIRRIAEVAKLF
                     VEAGLIVLVSFISPYRNERVLARESVEDDEFVEIFVDTPVEECSRRDPKGLYQKAYAG
                     QIRNFTGVDAPYEEPLNPEIRLRTLEASPEELAAQVIEDLRDRGVIT"
     gene            1985..2566
                     /locus_tag="VHX39_20170"
     CDS             1985..2566
                     /locus_tag="VHX39_20170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEX3993498.1"
                     /translation="MEVSSLEVIAEEARACTVCAPFLPLGPRPVLRVSTTARLLIIGQ
                     APGTKVHETGIPWNDPSGQRLRGWLTMDRAAFYDESRIAIVPMGLCYPGRLPNGGDAP
                     PRRECAPLWQTRLLNAMPAIRLTLLVGSYALTHVLGRGPMTDRVAAFRDHLPHYFPLP
                     HPSWRTTAWERKNPWFQAEALPALRHAVARALG"
     gene            complement(2558..2977)
                     /locus_tag="VHX39_20175"
     CDS             complement(2558..2977)
                     /locus_tag="VHX39_20175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase family protein"
                     /protein_id="HEX3993499.1"
                     /translation="MSGHRNPIPNFGLPPGLDDIAAMAQRALASIPPPFAQHVQDVLV
                     VVEDQADDATLHELGVETAWDLSGLYRGIPLTQRSVLDVVPEPDQIFLYRQAILLEWI
                     ETGEDLYRLVRSVVVHEVAHHFGFSDADIEAIEQDSA"
BASE COUNT          596 a          922 c          954 g          581 t
ORIGIN      
        1 cggctgttac ccgctgtccg ccgcagtgga gtccgcggcc ggcacgatcg atgagatcgt
       61 tgccgaaatg cgcaccacga aagtgtccga gcgtgccgga aggctgatcg accaggaaca
      121 gggcgcctcg atggaacgca aaaagcgtga ggggtatttc tgatgccgga atccctcctg
      181 cgggttctca cctgcggcag cgtcgacgac ggtaaatcga ccctgatcgg acggttgctg
      241 ttcgagtgcc gctcgatccc tgacgatgtg atggtggccc tggaacgcga ctcgatacgg
      301 tttggcactg tggaaggcag cgtcgattac gcattgctgg tcgatggact ggaggcggaa
      361 cgcgaacaag gcgtaacgat cgacgtcgcc taccggttct tcgagacgcc gcggcgccgg
      421 ttcatcctgg cggacacgcc tgggcatcaa caatacaccc gcaacatggc gaccggcgcg
      481 tcgaccgccg atctggcgat cttgttggtt gatgcgcgca acggactgct cgatcagact
      541 cgccggcacg ccgccattgc atcgcttctg ggcattcggg ccgtggtgct cgcgatcaac
      601 aagatggacc tggtcgggtt cgataagacc gtgttcgacg gcatcgtggc ggggttcgat
      661 cagttgcgaa accggctgga ggacatctcc gtcaccgcaa ttccgatctg cgcacgcgac
      721 ggcgacaacg tcacgcgcag cagtgcccgg atgccgtggt acaccggaac aacgttgctc
      781 gcagctttgg aaaatgccga gcccgcggcc cgtaccaacg gccataagtt ccgctttccg
      841 gtgcaatacg tctcccggcc cgatcaatcg tttcgcggct atgccggtac gatctcatcg
      901 ggaacgatcc gggtgggaga caaactcgcg aatgttgcat cgcggaccaa agccaaggtt
      961 gcacgcatcg tgaccatgga tggcgatctg gagacggccg ataccggaca gccggtgaca
     1021 ctggttctgg accgtgaaat cgatgtgtcg cgcggcgatg tactggctgc cgatccgtcg
     1081 ccgactgtgg ccgaccagat caacgcctgg gttgtctgga tggatgaaac gccgctgttt
     1141 cgcggccgtg cttatcagtt catgctgggc accaaaatgg tgaccggcac gataaccgac
     1201 atcaccaatc ggctcgacat cgacacgtta cgggaaatcg gtgtccggga actgcattta
     1261 aacgagatcg gccgcgttgc gatttcgctt tcgcatccgg tggtttgtga gccgtactcg
     1321 caaagccgcg acctcggtgg cttcattctg gtcgatcgcc tgaccatggg caccgtcggc
     1381 gccggcatga tcaccgacgt ccgtgccggg cgtaccaacg tctactggca ccagatggac
     1441 gtctccaagc aggcgcgggc cggattgaat cggcagaagc ccgcggtgct ttggttcacc
     1501 ggcctgtcgg gtgccggcaa atccaccata gccaatatcg ttgagaagca attgctggcg
     1561 cagggccatc acacgatgac cctcgatggc gacaacgttc gccacggcct gaaccgggac
     1621 ctggggttca ccgaagccga tcgtgtagag aatatccgtc gcatcgccga ggttgccaaa
     1681 ctcttcgtcg aagcgggtct catcgttttg gtctcgttta tttcgccgta ccggaacgaa
     1741 cgcgtgctgg cgcgcgagag cgtcgaggat gacgagttcg tggaaatatt cgtcgacacg
     1801 ccggtcgaag aatgttctcg ccgcgatccg aaaggcctct accagaaagc ttacgccggg
     1861 cagatccgca attttaccgg ggttgacgcg ccgtacgaag agccgctcaa tcccgaaatc
     1921 cgcctgcgca cgcttgaggc ttcgcccgag gagctggccg ctcaggtgat cgaggacctg
     1981 cgtgatcgag gtgtcatcac ttgaggtaat tgccgaagag gcgcgcgcct gtacggtctg
     2041 cgccccgttt ctgccgttgg gcccgaggcc ggtacttcgg gtttccacga ctgcacggct
     2101 gctgatcatc ggccaggcgc ccggcacgaa ggtgcatgaa accggcatcc cgtggaacga
     2161 tccatccggc caacgattgc gcggttggct gaccatggat cgagcggcgt tctacgatga
     2221 aagccggatc gccattgtgc caatgggact ttgttatccc ggccgattgc ctaacggcgg
     2281 ggacgctcca ccacggcgcg aatgtgcacc gctgtggcaa accagattgt tgaacgcaat
     2341 gccggcgatt cggttgacgc tactggtggg cagttacgca ctgacgcacg tattgggccg
     2401 aggtccgatg acggatcgcg tcgccgcgtt ccgcgaccat ctgccacact actttccgct
     2461 gccacatccg tcctggcgca cgaccgcatg ggaacgcaaa aatccatggt ttcaggccga
     2521 ggcattgccg gccctgcgcc acgcggtcgc cagagcgcta ggctgaatcc tgctcgatcg
     2581 cctcgatgtc ggcgtcgctg aagccgaaat gatgcgccac ctcatgcacg acgacgctgc
     2641 gcaccaggcg gtacaaatct tccccggttt cgatccattc cagcaaaatc gcttgccggt
     2701 acaggaatat ctggtccggc tccggcacga catcgagcac gctccgttgc gtcagcggta
     2761 tgccgcggta aagtccactc aaatcccatg ccgtttcaac gcccagttcg tgcagggtcg
     2821 catcgtcagc ctggtcctcg acgacgacga ggacatcctg cacgtgctgc gcgaacggcg
     2881 gaggaatgga cgccagcgcc ctctgggcca tggcagcgat gtcgtccaga ccgggaggca
     2941 ggccgaagtt ggggatggga ttgcggtggc cgctcatgga tgtattccgt ggggatgccg
     3001 ggccaccggg tcaagacagg agagtcacca aaatggcaaa ggtaaccgac gcc
//
LOCUS       DATAVD010001061         3375 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2707967, whole genome shotgun sequence.
ACCESSION   DATAVD010001061 DATAVD010000000
VERSION     DATAVD010001061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3375
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2707967"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            82..1622
                     /locus_tag="VHX39_20180"
                     /pseudo
     CDS             82..1622
                     /locus_tag="VHX39_20180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116569.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            1619..2239
                     /locus_tag="VHX39_20185"
     CDS             1619..2239
                     /locus_tag="VHX39_20185"
                     /inference="COORDINATES: protein motif:HMM:TIGR02292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein"
                     /protein_id="HEX3993500.1"
                     /translation="MTTRRRRPTRTGRGLSLEQLDDWLLALEPPARVEGVSMLDGYLT
                     AIIVGPRSIPPDEWFDDLFGARGNIAVASGTMMTAITSIVARFNAISEGLSAEPPRHA
                     PIFRKTDDGLAVPHLWCMGFLAGMRLRMDAWRPLLDLNRIDHGLMLPILLYCVDTSGR
                     PMLGPPREGPETEEFLRTAYQDIPLVVPAIREFWMPERVREADGQR"
     gene            complement(2482..>3375)
                     /gene="terL"
                     /locus_tag="VHX39_20190"
     CDS             complement(2482..>3375)
                     /gene="terL"
                     /locus_tag="VHX39_20190"
                     /inference="COORDINATES: protein motif:HMM:NF036421.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HEX3993501.1"
                     /translation="NSLLSRLNDKFNGCIVIIMQRLHQDDLVGHVLGQDDWEVLSFPA
                     IAEEDEMHVIDSVPGQKTFQRRAGDVLHPERESLATLETMRRTIGAYNFAAQYQQNPT
                     PPGGAMVKTEWLRFHTANERPREFSRIVQSWDTANKAADLNDYSVCTTWGVLDRRYYL
                     LDVFRQRLNYPELRRKVEELAARHDAGTILIEDKASGTQLIQELESQLFGVRAYKPPP
                     GADKVMRMHSQTIAFENGSASLPGDASWLNDYVIEITSFPGSKYDDQVDSTTQALDYL
                     RQGTLDIWERLYSPGFMPTCR"
BASE COUNT          626 a         1020 c         1070 g          659 t
ORIGIN      
        1 cggcggtgat ggcgtcgaaa taattcggtc ttcgcatttc ggacctggcg gcaccccgaa
       61 tcggtccggt agaatcaatg catgtcatcc ggcgtctctt cattgccgcg cgatcccgac
      121 atcctgatcg agatgatatc cgggttgcgc gccgagaacg aaaaactccg cgcgatgctg
      181 gagacgctga agcggacgct gtatggcgcg cgttcggaaa ggcgcgctgc cgatgacgcg
      241 caactggcgt tcggactggg tgatctgtca gcacttccgg tcgagcccga accggaggcc
      301 gcgacggcgg caggtcaagg ccagccgaaa ccgctccgac caaaggcatc gcgcaatatt
      361 ggcggcctac ccaatcattt gccgcgcaaa gatgtcgtca ttgagcccga gagtgacatt
      421 tgcccgtgct gcaagggcaa aactgcatcg gatcggcgag gacgtcagtg agaccctgga
      481 tatcgtgccg gcggtcatcc gggtcaaacg catccgccgg ccgaaatatg gctgccgtgc
      541 ctgtgagacc gcggttgtgc aggcgccggc gccgccccgg cccatcgatg gcgggttgcc
      601 cacggccgcg ttgctggcac acatcgcggt gtcgaagttc gcctggcacc tgccattgca
      661 ccgtcagacc caaatgctgg ccggccacgg catccatctt gatcgttcaa cgttggtcca
      721 ttggatcgag cgcgcggcct ggtggttgaa gccattgcac gaccttctgc tcgaaaccgt
      781 catggcagcc ggcaaaatct tctgtgacga cacgccgcta cccgtgctgg atcgttcacg
      841 aaagcgaacg cggatcggcc ggatctggtg ctacgcactg gacgaccggc cctggaacgg
      901 tcccgcgccg ccggttctgg tctatcttta cgcgccggat cgtcgcgggt ttcatctgga
      961 ggatcacctt ggaggattcc acggcgtgct gcaggtcgac ggctatgcag gctatgacaa
     1021 actggccaga ccaggccggg cggccggcgc gatcaaactc gcttactgcc ttgcgcacgc
     1081 gcggcgggaa ttcttcgatg tgcacaagcg gacgaaagac ccggtcgccg aagaggccat
     1141 gcgccggatc agtgagatct atgccatcga ggcgcgtatc cgtggccgtg ccgagggcga
     1201 tcgggttgcg gtgcgtcagg cggagacgag gccgctgatg gaggcgttgt ggtcctggtt
     1261 gatggagcgg ctggaagaaa tctccgcgaa gtcatcgctg gcgagcgcga tccgttacac
     1321 cctcggtcac tggaagggac tgacgctgtt cttgtccgat ggccgggtgg aagtggacaa
     1381 taatacggtc gagcggggca tccgtccgat tccggaggcg agcgatgggc cgttctggca
     1441 tcactgatca acaccgcctt atgcagggcc cggcataaac cgccaaactg catgacatcg
     1501 atcctcagac ttacctcgcc gatgtgctcg atcgcatcgt ctccggtcgc accaaagtga
     1561 atgcgttgcg cgaactgttg ccctgggaat ggaaggcggc gcgggaggcc gtggccgcat
     1621 gaccactcgc cgccgacgtc ccacgcggac cggacgaggt ctgagcctcg agcagctgga
     1681 tgactggctc ctcgcgcttg agcccccggc acgggtcgaa ggcgtctcaa tgctggacgg
     1741 atatttgacc gccatcatcg ttgggccgcg atcgatcccg cctgacgaat ggtttgacga
     1801 cctgttcggc gcgcggggca acatcgccgt cgcgtcgggc acgatgatga cagcgatcac
     1861 gtcgatcgtc gcgcggttca acgcgatcag tgaggggctg tcagcggaac ctccacggca
     1921 tgcaccgatc ttccggaaaa cggatgacgg cctcgcggtg ccgcatctct ggtgcatggg
     1981 gttcctggcg ggaatgcggt tacggatgga cgcctggcgg ccgctgctgg atctgaaccg
     2041 cattgatcac gggctgatgt tgccgatcct actttactgt gtcgatacat caggccgtcc
     2101 gatgctcggt ccgcctcgag agggacccga gaccgaggag ttcctccgca cggcgtacca
     2161 ggacatcccg cttgtcgtgc cagcgatcag ggagttctgg atgccggaac gggtgcgcga
     2221 ggcggacggt caacgctgac ggtcgtgcgc ttctcgcacc ggttacgttc aatgctccaa
     2281 cggaagttaa tgtgacaatg ccgccagaca gcatggcaga ttatttcggc gggaaagcgg
     2341 tggcggtggt gcggatcagg cgggggcttc atgccgccaa tctcgctggt ctccaaacgg
     2401 ccggccagac ccggttaccg tgacaatgcc ggtccgagga catgagacgc gggaccgacg
     2461 atgagccggc ctaccggtca gtcaccgaca tgttggcatg aaacctggac tgtacaatcg
     2521 ttcccatatg tccaacgtac cttgccggag gtaatccagg gcctgggtcg ttgaatcgac
     2581 ctgatcgtca tacttcgaac ccggaaagct ggtaatttcg attacgtagt cattcagcca
     2641 ggacgcgtcc cctggcagcg acgcgctgcc gttctcgaac gcaatcgtct gagaatgcat
     2701 gcgcatgacc ttgtcggcgc caggcggcgg tttgtacgct ctgacgccga acaactgact
     2761 ctccagctcc tggatcagct gcgtgcccga tgccttgtcc tcgatcagga tcgtgcccgc
     2821 gtcgtgccgc gcggccagtt cttccacctt tcgccgaagc tccgggtaat tcagccgttg
     2881 gcgaaacacg tcgagtaggt aatagcgacg gtcgagtacg ccccacgtcg tgcacacgct
     2941 gtagtcgttc agatccgctg ctttattggc ggtatcccaa ctctggacaa tgcggctgaa
     3001 ttcccggggc cgctcgttcg ccgtatggaa gcggagccat tcggtcttca ccatggcgcc
     3061 gccgggtggc gtcggatttt gctgatactg agcggcgaaa ttgtatgcgc cgatggtccg
     3121 ccgcatggtc tccagcgtgg cgagagattc ccgttccgga tgcagcacgt ctcccgcccg
     3181 ccgttggaat gtcttttgcc caggcacgct gtcgatcaca tgcatctcgt cctcctcggc
     3241 gatggccggg aacgacaaga cctcccagtc gtcctgcccc aggacatgac caacgagatc
     3301 gtcctgatgc agacgctgca tgatgatgac gatgcaacca ttgaatttgt cgttcaggcg
     3361 actgagcagc gaatt
//
LOCUS       DATAVD010001062         3197 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2893984, whole genome shotgun sequence.
ACCESSION   DATAVD010001062 DATAVD010000000
VERSION     DATAVD010001062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3197
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2893984"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..421)
                     /locus_tag="VHX39_20195"
     CDS             complement(<1..421)
                     /locus_tag="VHX39_20195"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX3993502.1"
                     /translation="MAIAPRRILITGATGFVGRHLTAALPAAFPDASLFIPEFDISDP
                     TAVDSAISQSLPDVCLHLAAISTNAQAMPDETHTWAVNLHGPLHLARAILQHTRDCQL
                     LFVSTADAYGASYRSGNKLDESAALAPLSLYSATKAAA"
     gene            complement(423..1406)
                     /locus_tag="VHX39_20200"
     CDS             complement(423..1406)
                     /locus_tag="VHX39_20200"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008850354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008446 - GDP-mannose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_function: GO:0070401 - NADP+ binding [Evidence IEA];
                     GO_process: GO:0019673 - GDP-mannose metabolic process
                     [Evidence IEA];
                     GO_process: GO:0042351 - 'de novo' GDP-L-fucose
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEX3993503.1"
                     /translation="MPTCLITGVTGQDGAYLSRFLLEKGYRVIGMLRRSASADVVGER
                     LRWLGILDQVELVDGDLLDVSGMIRLLRTYQPDEVYNLGAQSFVAASWNQPLLTGQVT
                     GLGAANMLEAIRLTCPQARFYQASSSEMYGRIREPRQNENTPFYPRSPYAAAKLYAHS
                     MTVNYRESFAIHASAGILFNHESPLRGIEFVTRKITDGVARIKLGLARELPLGNLEAR
                     RDWGHAQDYVRAMWLMLQQKTPGDYVVATGTNTSIREFCQLAFTYAGLNYEDHVVTRS
                     DLLRPAEVDVLLGDPSKAEKTLGWTPLISMQDMIAEMVEADLVRHRGRPQS"
     gene            1640..>3197
                     /locus_tag="VHX39_20205"
     CDS             1640..>3197
                     /locus_tag="VHX39_20205"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3993504.1"
                     /translation="MATAARPGLLPIIRTVACAALWQIMRLSHVLDRPWPALGDRTRR
                     LILFLWSNVTSWLPDHVRRRLRGEAEVSPPVLTAPERRPDIAPEAICLAHCDAPLVSV
                     VIPTYGELQFTLRCLASIQAHTPIVPIEVIVIDDAFPGEAAAALARLRGVRLIRNEVN
                     LGFLHSCNTAARLAHGAFLLFLNNDTEVRPGWLDCMVEVFETRPDTGIVGSKLLGFDG
                     RLQEAGGIVWRDGSAWNYGRDQDPEAPEFNYLREADYCSGASLLVRRDVFLEAGGFDE
                     KYAPAYCEDADLSFRLRDKGLQTVYQPRSEIMHFEGATHGRDPNNGIKACQVANRTRF
                     LETWHATLAHEHYPEATHVMRARDRATRRQVVLIVDHYMPQPDRDAGSRTMVTFIHAL
                     LRCGVVVKFWPFNLQRTPGYTEALQDIGVEVLYRPHQATLSDWLKVNGADLDIVLLSR
                     PDVAEKCLQPLRAGSSAKIAYYGHDLHFRRLEAEAVLTGNAAQRRAAQAMQTVEAGIW
                     QQADLVLYPSD"
BASE COUNT          609 a          943 c         1000 g          645 t
ORIGIN      
        1 cggcggccgc cttggttgct gaataaaggc tcagcggggc aagtgctgca ctctcatcca
       61 atttgttgcc cgaacggtat gatgcgccat aggcgtccgc agtcgacacg aacagcaact
      121 gacagtcgcg cgtgtgctgc aggatcgcgc gcgccaggtg cagtgggccg tgcaggttaa
      181 ccgcccaggt gtgagtttcg tcaggcattg cctgagcatt ggtcgagatg gctgccagat
      241 ggaggcaaac atcaggcaaa ctctggctta tcgcgctgtc gaccgcggtt gggtcgctga
      301 tgtcgaattc cgggataaaa aggctggcat cggggaaggc cgccggcaga gcggcagtca
      361 ggtggcgtcc aacaaagcct gtcgcacccg tgatcagaat gcgacgcggc gcgattgcca
      421 tgtcaggact gcggccggcc ccgatgccgg acgagatccg cttcgaccat ctcggcgatc
      481 atgtcttgca tcgaaatcag tggcgtccag ccaagcgtct tttctgcctt cgagggatct
      541 cccagcaata cgtcgacctc agcaggcctc agcaaatctg atctggtgac gacgtgatcc
      601 tcgtaattga gtccggcgta cgtgaatgcc agctggcaaa actcccgaat cgacgtattg
      661 gtgcccgttg ccaccacata atcgccaggt gtcttctgtt gcagcatcag ccacatcgcg
      721 cgcacataat cctgcgcgtg gccccagtcg cgccgcgcct ccagattgcc aagcggcagc
      781 tcgcgggcaa ggcccagttt gatgcgtgcc acgccgtcgg tgatcttgcg ggtgacaaac
      841 tcgatgcccc gcagcgggct ttcatgattg aacaggatcc cggccgaggc gtggatcgca
      901 aagctctcac gataattcac ggtcatcgag tgggcgtaga gcttggcggc ggcgtacggg
      961 gaacgggggt agaacggcgt gttctcattc tgccgcggct cgcgaatgcg gccatacatc
     1021 tccgatgagg aggcctggta gaagcgcgcc tgagggcagg tgaggcgaat cgcctcgagc
     1081 atgttggcgg caccgaggcc ggtcacctgg ccggtcagca gcggctggtt ccaggaggca
     1141 gcgacaaaac tttgcgcacc caggttatag acttcgtccg gttggtaggt gcgcaacagc
     1201 cggatcatgc cggaaacatc gagcagatcg ccatccacca gttccacctg gtcgaggatg
     1261 ccgagccaac gcaacctctc ccccaccacg tcggccgagg cggagcggcg cagcatgccg
     1321 atgacacggt agcccttttc caacaggaaa cgcgacaaat acgcaccgtc ctggccggtg
     1381 acgcccgtta tcaaacaggt cggcatttga attcgttcat ggataagtgg ttgcctcaca
     1441 cacaagggaa atattagctg ggtggcagat aagcccctcc tgtgctccgg tcaagcgtcg
     1501 ggttccgtaa cgattatgcg gcattccaat gtccaacggc cgcccggccg gtgtcgccga
     1561 attcagcagt ttcttaacca tatcctcaca agtttgcttc attgatggcg gtctcggagc
     1621 taatgtgtgg tgagacaaca tggcaaccgc cgccagacct gggttgctgc caatcattcg
     1681 aactgtggca tgcgcggcgt tatggcaaat catgcgcctg tcgcacgtat tggacaggcc
     1741 gtggcccgcg ctgggtgacc gcacgcgccg cctgattttg tttttgtggt cgaacgttac
     1801 ttcgtggctg cccgatcacg tgcgccgccg gttgcgcggc gaggcggaag tttccccacc
     1861 cgtcctgacc gcgcccgagc gcaggccgga tatcgcgccc gaagcgattt gcctggcgca
     1921 ttgcgatgca cccctggttt cggttgtcat cccaacctat ggcgaactgc agttcaccct
     1981 gcgctgtctg gcgtcgatcc aggcgcatac tcccatcgtg ccgatcgagg tgattgtcat
     2041 cgacgatgcg tttccgggtg aagcggcagc ggcactggcg cggttacgcg gcgtgcggct
     2101 gatccgtaac gaggtcaatc ttggtttcct gcactcctgc aacacggcgg cgcgactggc
     2161 gcacggtgca ttcttgttgt ttctaaacaa cgataccgag gtccgcccag gatggctcga
     2221 ttgcatggtg gaggtgttcg agacccgacc cgacaccggt attgtcggtt ccaaattgct
     2281 tgggttcgac ggaaggttgc aggaagccgg cggtatcgtc tggcgtgacg gctcggcctg
     2341 gaactacggc cgtgaccagg atcccgaggc accggaattc aattatctgc gcgaggccga
     2401 ctattgctcg ggcgcatcac tgctggtgcg gcgcgacgtg tttctggagg ctggcgggtt
     2461 cgatgaaaaa tacgccccgg cgtattgcga ggatgccgat ctctcgttcc ggttgcgcga
     2521 caaagggctg cagacggtct atcagccgcg ttccgagatc atgcattttg aaggtgcgac
     2581 gcatggccgc gacccgaaca atggcatcaa ggcttgtcag gtcgccaatc ggacaagatt
     2641 tctggaaacc tggcatgcca cgctggcgca cgagcattat ccggaggcca cgcatgtgat
     2701 gcgtgccagg gatcgcgcca cccgccgtca ggtggtgctg atcgtcgacc attacatgcc
     2761 gcaaccggat cgggacgccg gctcgcgcac catggtcacg ttcattcacg cactgctccg
     2821 ttgcggggtg gtggtgaagt tctggccgtt caacctgcag cgaacgcccg gttataccga
     2881 ggcgctgcag gatatcggcg tcgaggtgtt gtaccgtcca catcaggcca cgctctccga
     2941 ttggctcaag gtcaatggcg cggatctgga tatcgtgctg ctcagccgtc cggatgtggc
     3001 ggaaaagtgc ctgcaaccgt tacgtgccgg cagctcggca aagatcgcgt attatggcca
     3061 cgacctgcat ttcagacggt tggaggcgga ggctgttctc accggcaacg ccgcgcaacg
     3121 tcgggcggcg caggccatgc aaactgtcga agccggcatc tggcagcagg ccgatctggt
     3181 actttatcca tccgatg
//
LOCUS       DATAVD010001063         3176 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3078447, whole genome shotgun sequence.
ACCESSION   DATAVD010001063 DATAVD010000000
VERSION     DATAVD010001063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3176
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3078447"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            128..253
                     /locus_tag="VHX39_20210"
     CDS             128..253
                     /locus_tag="VHX39_20210"
                     /inference="COORDINATES: protein motif:HMM:NF014351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0043752 - adenosylcobinamide kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
                     /protein_id="HEX3993505.1"
                     /translation="MVPETPLGRAFRDRSGLLHQRIAARADRVLFMVAGLPMTVK"
     gene            complement(323..709)
                     /locus_tag="VHX39_20215"
     CDS             complement(323..709)
                     /locus_tag="VHX39_20215"
                     /inference="COORDINATES: protein motif:HMM:NF019460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1636 domain-containing protein"
                     /protein_id="HEX3993506.1"
                     /translation="MGEIGVTVFVCVTCAPQADNGLSLGRRLYNAVTARTGAEMAAVL
                     TVAPIECLAVCKRPCTVALSGPGKWTCVVGDLDPEQHAGDVIAAAQSYVATENGIIPW
                     RQRPLSFRKGVVARVPPIGFRPAEDV"
     gene            complement(730..1395)
                     /gene="bluB"
                     /locus_tag="VHX39_20220"
     CDS             complement(730..1395)
                     /gene="bluB"
                     /locus_tag="VHX39_20220"
                     /EC_number="1.13.11.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014414770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016722 - oxidoreductase activity, acting
                     on metal ions [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0032363 - FMN catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5,6-dimethylbenzimidazole synthase"
                     /protein_id="HEX3993507.1"
                     /translation="MTGQVVDLPIVPPLFDDAFRTRLETLISWRRDVRRFSARAVPAS
                     LIEYLLDLAQYSPSVGNSQPWRWVRVESPEKRAAIRENFRASNAAAVTGMPGERAHLY
                     STLKLEGLNRAPVQFAVFCDRATRQGLGLGCHTMPEMLEYSVAAMLSTVWLAARAAGL
                     GLGWVSILEPQAVGRLFGVPPSWKLIAYLCVGWPEEEHLDPELERHRWQARTGVGRQV
                     TIV"
     gene            complement(1392..2726)
                     /locus_tag="VHX39_20225"
     CDS             complement(1392..2726)
                     /locus_tag="VHX39_20225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042242 - cobyrinic acid a,c-diamide
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobyrinate a,c-diamide synthase"
                     /protein_id="HEX3993508.1"
                     /translation="MTMPQICPGLMIAAPRSGSGKTTLTLGLLRALRRDGVAVSGAKC
                     GPDYIDPPFHLAASGRPSVNLDSWAMPPELIASLAARTGAGSDLILCEALMGLFDGVP
                     GVPGRTGSSADVVAALGWPILLVLDVSGQSQSAAAIVKGCATYDPRLTLAGVVLNRVG
                     SARHASLATAAIEALGIPVVGALPRSTDIALAERHLGLVQAGETRDLDARLDRIADFV
                     ALHTQVDKIRSLAGTGQEPRHEILGQPAVRPPGQRIAVARDAAFSFLYPHLLDGWRAA
                     GADIHFFSPLADEGPADICDSCWLPGGYPELHAGTLARASRWFDQLRRFAVTRPIHGE
                     CGGYMVLGQTLTDADGVAHPMAGLLGVKTSFARRKLHLGYRIARLIDDGCLGHAGTRL
                     RGHEFHYASVDNLGFDAAFAEISDAHGGASEPTGGRRGNVTGSFFHLIAADL"
     gene            complement(2743..>3176)
                     /locus_tag="VHX39_20230"
     CDS             complement(2743..>3176)
                     /locus_tag="VHX39_20230"
                     /inference="COORDINATES: protein motif:HMM:NF012799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEX3993509.1"
                     /translation="FRVIPGLTSGLAGLAYANIPATTRDTNHGVVLVTGQYAGGDERS
                     PEWDAVARTGLPIILYMAMNRLAAIMASLITSGLAPDLPVAVVQDATTPEQRVLVSTL
                     AQVGEEAAAQGFGAPAIVAIGAMVRLREMLLPLAVALADEP"
BASE COUNT          621 a         1056 c          968 g          531 t
ORIGIN      
        1 gacgctttgg ctaagcaacc tgatgctcga cggtcaggat accgacgcgg cattcgaggc
       61 gcttgagatt tcactgcaac ggcgcttcgg accgtccatt ctggttggca gctaggtcgg
      121 tcttggcatt gtcccggaaa cgcctcttgg gcgagcgttc cgcgatcgct ctgggctgct
      181 tcaccaacgc attgcggccc gtgccgatcg cgtgctgttc atggtcgccg gattgccgat
      241 gaccgtgaaa tgagggtcgt gttgatccgc catctcgggc cattggctga gcgcgaaccc
      301 gaggcaatga cggttggtac aatcacacgt cctccgcggg ccggaaccca atcggtggaa
      361 cgcgggcgac gacaccttta cgaaacgaca atggccgttg ccgccacggg atgatgccgt
      421 tctccgtagc cacataactc tgggctgccg cgataacgtc gccggcgtgc tgttccggat
      481 cgagatcccc caccacgcag gtccattttc ccggcccaga cagagcgacg gtacaaggcc
      541 gcttgcagac cgcgaggcat tcgatcggcg ccacggttag cacggccgcc atctcggcac
      601 ccgttcgcgc ggtgacggca ttgtacagcc ggcgtccgag cgacagcccg ttatccgcct
      661 gcggagcgca ggtgacgcaa acaaataccg tcacgccgat ctcacccatg cttccatccg
      721 atccggccat caaacgatcg tgacctggcg acccacgccg gtacgtgcct gccagcgatg
      781 acgttccagt tcggggtcga ggtgctcttc ctcgggccat ccaacgcaca gataggcaat
      841 cagcttccac gatggcggta cgccaaacaa tcgcccaacc gcctgaggtt ccaaaatcga
      901 cacccacccc aacccgaggc cggcggcacg cgcggccagc cagaccgtcg ataacatcgc
      961 cgccacggaa tattcgagca tctccggcat ggtgtggcac cccagcccga gcccttgccg
     1021 tgtcgcccgg tcgcagaaaa ccgcgaattg caccggcgcc cggttcagcc cctcaagctt
     1081 caaagtcgag tagagatgcg cgcgctcccc cggcatgccg gtgaccgccg ctgcgttgct
     1141 ggcgcgaaaa ttctcccgga tggctgcacg cttctccgga ctttccaccc gcacccaacg
     1201 ccagggctga ctgttgccca ccgacggcga gtactgcgcc agatccagca aatattcgat
     1261 cagtgatgca ggcaccgcgc gcgcgctgaa ccggcgcacg tcacgacgcc aggagatcaa
     1321 tgtttccagc ctcgtccgga atgcatcatc gaataacggg ggcacgatcg ggagatcgac
     1381 aacctggcct gtcataagtc agccgcgatc agatgaaaaa aactacctgt cacgttgccg
     1441 cgccgtccgc ccgtcggctc cgatgctccg ccatgagcgt cagagatttc ggcgaaagcg
     1501 gcgtcgaagc cgagattgtc cacgctcgcg taatggaatt cgtgaccacg caatcgtgtg
     1561 ccggcgtgcc cgaggcagcc gtcgtcgatc agacgggcga tccgatagcc gagatgcagt
     1621 tttcggcgag cgaagctggt cttcacaccc agaagaccgg ccatcggatg ggccacgcca
     1681 tcggcatcgg tcaaggtctg tccgagcacc atgtagccgc cacactcccc gtggatcgga
     1741 cgtgtcacgg cgaagcgtcg caactggtcg aaccaccgcg aggccctggc cagggttccg
     1801 gcatgcaatt cgggatagcc gcccggcagc cagcacgagt cgcaaatgtc ggccggcccc
     1861 tcatcggcca acggcgagaa gaaatggatg tccgctccgg cggctcgcca gccatcgagc
     1921 aaatgcgggt agaggaagga aaacgcggca tctcgagcga ctgcgatccg ttgtccgggc
     1981 ggccggacgg ctggctggcc caatatttcg tgtctgggct cctggcctgt gccggccagc
     2041 gatcgaattt tgtcgacctg tgtgtggagg gcaacgaaat cggcaatccg atccaatctt
     2101 gcgtcgagat cgcgggtctc gcccgcctga accagcccca ggtgacgctc ggccaaggcg
     2161 atgtcggtgg agcgcggcaa agcaccgacc accgggatac caagcgcttc gatggctgcc
     2221 gtcgcgagac ttgcatggcg ggcgctgccg acgcggttga gcaccacccc agcgagtgtc
     2281 aaacgtggat cgtacgtcgc gcaccctttg acgatggccg ccgcagactg cgattggccg
     2341 ctgacgtcga gcaccaacag aatcggccag ccaagagccg ccacgacgtc agcggatgac
     2401 ccggtgcgcc cagggacgcc tgggacgcca tcgaacagac ccatcagggc ttcacacagg
     2461 atcaggtcgc tgccagcgcc ggtgcgtgca gccagactcg cgataagctc agggggcatc
     2521 gcccaggagt cgagattgac gctggggcgg cccgatgcgg caagatgaaa cggcggatcg
     2581 atgtagtccg gcccgcattt cgctccgctg actgccaccc cgtcacggcg caatgccctc
     2641 agtaacccta acgtcagcgt tgtcttgcca ctgccggatc ggggtgctgc gatcatcagg
     2701 ccaggacaga tttgcggcat tgtcatgatt ggaaaatgcc catcatggtt cgtccgccag
     2761 agcgacggcg agcggcagca gcatctctcg cagtcggacc atggccccaa tcgccacaat
     2821 cgccggcgct ccaaacccct gagccgccgc ttcctcaccc acctgggcga gtgtcgacac
     2881 cagcacacgt tgttccggcg tggtcgcatc ttgcacgacg gcgaccggaa ggtcgggtgc
     2941 cagaccgctc gttatcaggg acgccatgat agcggccaac cggttcatcg ccatgtagag
     3001 aatgatcggc aggccggtcc gcgcaaccgc gtcccactca ggtgagcgtt cgtcaccacc
     3061 ggcgtactgg ccggtcacca ggacgacgcc atgattggtg tcgcgggtcg tcgcaggaat
     3121 gttggcatag gccagtccgg ctaaccccga cgtcaggccc ggaatgaccc ggaacg
//
LOCUS       DATAVD010001064        19342 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2708203, whole genome shotgun sequence.
ACCESSION   DATAVD010001064 DATAVD010000000
VERSION     DATAVD010001064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 19342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19342
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2708203"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..105
                     /locus_tag="VHX39_20235"
                     /pseudo
     CDS             1..105
                     /locus_tag="VHX39_20235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084489.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
     gene            444..1664
                     /gene="tal"
                     /locus_tag="VHX39_20240"
                     /pseudo
     CDS             444..1664
                     /gene="tal"
                     /locus_tag="VHX39_20240"
                     /inference="COORDINATES: protein motif:HMM:NF013116.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
     gene            2019..2336
                     /locus_tag="VHX39_20245"
     CDS             2019..2336
                     /locus_tag="VHX39_20245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993510.1"
                     /translation="MKPLLLAGFLALSSVAAFAQASAQPANPKPSTPAVATSTTPAPA
                     APAAGGNSFTMAQAQSRIEAAGYSNVSGLAKDKDGVWRGTASKGGTPTDVSLDYQGNV
                     LPK"
     gene            2369..2968
                     /locus_tag="VHX39_20250"
     CDS             2369..2968
                     /locus_tag="VHX39_20250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993511.1"
                     /translation="MTQTVTALFDRHEDAAAAVRNLEIVGIPDADISMVANNTESWYK
                     ADQPSNAAGDAGAGAGIGAVAGGGVGLLTGLGIMAIPGVGPVVAAGWLVATAAGTVLG
                     AAAGGAAGGIVGALTNSGVSETHAHVYAEGVRRGGTPVTARVADDRVAEANGILDRSR
                     QVNLDARGDAYRQTGWSRFDTDAPVYTDEQVSRERDLYR"
     gene            3181..3642
                     /locus_tag="VHX39_20255"
     CDS             3181..3642
                     /locus_tag="VHX39_20255"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhjD/YihY/BrkB family envelope integrity
                     protein"
                     /protein_id="HEX3993512.1"
                     /translation="MFGRIWRLLRDSVQAFIEDDALSRGASISFYTVTSIGPMLFIVI
                     AVAGLAFGEDAARGAIAARLSDLTGKASADLVQTAVQSASDKSSGILASVVGAATLLI
                     TASSVFGEMQSALNAIWKTNLRALSFRAWCGLARRASVWSQRSASCCWSLW"
     gene            complement(3891..4865)
                     /locus_tag="VHX39_20260"
     CDS             complement(3891..4865)
                     /locus_tag="VHX39_20260"
                     /inference="COORDINATES: protein motif:HMM:NF013502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEX3993513.1"
                     /translation="MGRRDIIAIGGSLGAVEAMKQLCEALPADLAATLFVVIHVGAVG
                     KDLLAGIFDARSPLSIRTAVDGEVITPGHGYVAPADHHLLVIDNVVKLGRGPRENMSR
                     PAIDPLFRSVGMSFGPRTIAVVLTGMLNDGAAGLADVKRCGGITVVQSPADAFAPDMP
                     SGALLASDVDYRAPLSGLAELLVKLTTEEAGPAVAVPADIRTEVEIALGRRSDPQVIA
                     GIADPVPMSCPACGGVLSQIRQPPLRFRCQVGHAYTAEALAEVTEGSVDEAIRVALRI
                     MEERATLTQKMADDARRSGRDAAAVSYERRVSESRAYASVLQKAAGEV"
     gene            5010..8513
                     /locus_tag="VHX39_20265"
     CDS             5010..8513
                     /locus_tag="VHX39_20265"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEX3993514.1"
                     /translation="MRQDSDPPIVGIGASAGGVMALQSFFEALPDEPEAAFVVVIHLA
                     PEFRSQLASILATRTPMPVVQIEQAMRLEKNHVYVIAPDSRLMIADHTISAFPFDEPR
                     SQRAPIDLFFRSLAEQHTDGFAYAVILTGAGADGAIGVRAIKESGGIVLVQDPNEAEY
                     ASMPRSAIAAGVADFVLPVRGLAKQLVELLKDGHEAAPGFGPGTDEAMLRRILAHLRV
                     RIGHDFTLYKRATILRRIARRVQVTRKESLADYYDFLRENAEEAQSLFTDFLISVTTF
                     FRDPDAFELLAQKVIPQLFEGKEEDGNIRVWVPGCATGEEAYTIGILLLEEAARRDLR
                     PEIQVFGSDLDAGALAIGREGRYPATIEADVPEDRLRRFFQREGDHYRVRRELRDIVL
                     FASHSLLRDPPFSRLDMISCRNLLIYLGRDLQHQVCNTFHYALNQGGFLFLGASESAD
                     QPVGLFRTIDRDARIYRSVTGSADKRPALPILAGPRQMPSGEPAVPRLPPPGASGNDA
                     ASHRQMLESIAPPSMLVDESHRAVHLSRSAGRFLQLSGGPVSTEAAEMVREEFRFDLR
                     TALHRAFDRGESTLSMQLLVQFNGSKHRVYLQVKPVVQDNDPTRYALVLFIEGEAIDE
                     EVPESSLDWRDGGSAGETVRQLREELQLAHNRLRATREESEAANEELRAANEELQSIN
                     EEYRSTSEELETSKEELQSINEELQTVNNELKLKLESVSRAHSDLQNLMAATDFGTLF
                     LDSSLRIKRFTPRLTELFNITSSDEGRPITDFTHQLKYEEMADHARQVLKDLAPVEHE
                     VESQDGCWYFVRVRPYRTVDDKIDGVVATFVNITERRRGEEALRESEARLRQETRLVE
                     LSRSPIFVWDLDNGIVQWNRGSEELYGYSRQEAIGQQKNILLRTTVPGSSFENLRQSL
                     IEHQTWNGELLHRTKRGQVLTVESQIELVPIGTRRLVLESTHDVTDRKKWEHRQQLLL
                     SELSHRVSNTLAVVQSMARQTLRTAASEQEFVELFEGRLHCLARAHTLLVEARWEGTE
                     FNHLALTQLAAYLADDPPRLRISGPPVTLASDFATPFGLVLHELATNAAKYGALSVET
                     GRVLLSWTLDVENGTRVFRVTWRESGGPPVTAPDKRGFGGTLIERSLAGATVRREFAR
                     SGLVCTIELELPEDRGDGIQL"
     gene            8536..8883
                     /locus_tag="VHX39_20270"
     CDS             8536..8883
                     /locus_tag="VHX39_20270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993515.1"
                     /translation="MRILIADDEFLVAIAIEEAFRDAGADVVTAATLAAALKSARAGD
                     VLSAAFLDVRLGRETTEVVADELAARAVPFAFYTGQALPDHIRRKHPDIKVLIKPSKQ
                     ELFISTILDIVRH"
     gene            complement(8939..9175)
                     /locus_tag="VHX39_20275"
     CDS             complement(8939..9175)
                     /locus_tag="VHX39_20275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993516.1"
                     /translation="MTQVSKGTLRAIMREVEPNVFKAEYPGEMNQDEAGVEAFPDSHV
                     KTDAASVKLWVETMATDLGYDRVVWEPPTAAASG"
     gene            complement(9184..11316)
                     /locus_tag="VHX39_20280"
     CDS             complement(9184..11316)
                     /locus_tag="VHX39_20280"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3993517.1"
                     /translation="MSAFVGRSISRVGGPEKVTGQATYAAEFRLRNMAFAAQVRSTIA
                     KGRITAMDAVQAESSPGVLAVITHLNAPKLPYEPLENRPQVDPQSGDQLRVFQGPDVL
                     FSGQTVALVVAETQEQADAAASTILVTYESAPAVTEMRLGDGRAPSESVAKSGRPGEK
                     QRGDPEAALAGAPVTIDIHCAHEREIHSAMEPHATIAEWDGEKLTLYDKTQWVDNVRL
                     EISRVFGIPERAIHVISPYVGGAFGSALRTWPHVTMAAMAARVVGRPVRVELTRRECF
                     TSVGGRPRTEQRVRMGADRNGKLTAIVQEAWGQTSTYEEYAEVTLDPPRALYACPNVA
                     TRYRLVEMNINSPCPMRAPGTATGVMALEMAMDEMAHQLGLDPVEFRLRNHAERDEDK
                     GLPWSSKALRSCYAMGGERFGWSQRSPVPGRNRKGKWLIGHGMGTAFYPSHRAPANAQ
                     AILFANGSAVVRTAASDMGPGTYTAMTQLAADALGLPIERVHFELGDTDMPEAPVHGG
                     SITLASVGNAVVSACQNLRQKLGGDGDLVALMQAQGVEKLEAEGQAAPGDETKTYSSA
                     AFGAVFVEVMVDPAFGVVRVPRIIGAYDIGTVVNPKIARSQCIGGMVGGLGMALLEQA
                     EWDSHLGRIMNANLAEYLVPVNADIQELDALFVPGEDKIFNPLGSKGVAEIALTGVAP
                     AIANAVYNATGNRVRHLPMTPDRLLNVL"
     gene            complement(11313..11669)
                     /locus_tag="VHX39_20285"
     CDS             complement(11313..11669)
                     /locus_tag="VHX39_20285"
                     /inference="COORDINATES: protein motif:HMM:NF015415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993518.1"
                     /translation="MITEIVLPLNEFASTSAYVKVRDRATFEWPVVSAAVGLKMEGIR
                     IRAARIAVGGVGTKPWPLPHVEKALVDHALDPVTVSAAAQLSIEGAKAYAGNEFKLKL
                     LLRVVERVILTAGGQI"
     gene            complement(11655..12296)
                     /locus_tag="VHX39_20290"
                     /pseudo
     CDS             complement(11655..12296)
                     /locus_tag="VHX39_20290"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
     gene            complement(12326..12723)
                     /locus_tag="VHX39_20295"
                     /pseudo
     CDS             complement(12326..12723)
                     /locus_tag="VHX39_20295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007006270.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
     gene            complement(13035..13823)
                     /locus_tag="VHX39_20300"
     CDS             complement(13035..13823)
                     /locus_tag="VHX39_20300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3993519.1"
                     /translation="MIDKLRSLAVVTGASTGIGFELAKCCARNGFDLLVAADEAAIHT
                     AASAFRDMGVSVDAVEADLATIQGVDKLYTAIGGRTVEALLANAGRGLGKGFLDQDFN
                     AVRRVVDTNITGTLYLLQKVGRDMRSRGQGRILITGSIAGFMPGTYQAVYNGTKAFLD
                     SFSFALRHELKETRVTVTCLMPGATETDFFERADMMDTKIGSGKKDDAADVAETGFKA
                     MMNGDGDVVTGWQNKLQSAIALVTPSDLLAEAHRRMAQPGTAKQ"
     gene            complement(13840..15009)
                     /locus_tag="VHX39_20305"
     CDS             complement(13840..15009)
                     /locus_tag="VHX39_20305"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase activity,
                     zinc-dependent [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase"
                     /protein_id="HEX3993520.1"
                     /translation="MRALTWHGKGDMRCETVPDPTIEQPQDAIIKVTACAICGSDLHI
                     YDGMIPSMQHGDVLGHETMGEVVEVGAEVRGLKPGDRVVVPFTISCGECFFCKRGFFS
                     GCERSNPDHKKAEKVWGHSPAGLFGYSHLLGGYAGGQAEYLRVPFADVGPVKMPDGLS
                     DEQVLFLSDIFPTGYMAADFCNIQKGDTIAIWGCGPVGQFAIRSAFLLGAERVIAIDT
                     VPERLTLARQAGALTLDFKEDDIYDRIQDLTNGRGADACIDAVGTEADATASFDSVVD
                     RIKVATFMGTDRPHVLRQAIHCCRNFGTVSIVGVYGGFLDKVPMGSAINRGLTFRMAQ
                     TPVQHYLPMLMDRIQKGEIDPSFVITHRASLQEGPELYKTFRDKKDGCIKVVLKP"
     gene            15726..16814
                     /locus_tag="VHX39_20310"
                     /pseudo
     CDS             15726..16814
                     /locus_tag="VHX39_20310"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
     gene            16798..16977
                     /locus_tag="VHX39_20315"
     CDS             16798..16977
                     /locus_tag="VHX39_20315"
                     /inference="COORDINATES: protein motif:HMM:NF022150.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KGG domain-containing protein"
                     /protein_id="HEX3993521.1"
                     /translation="MTSKSEHSSTSDKKAEGQKGVTQEQVGSGKKNDPNNFAYNSERA
                     SAAGRKGGHESHKGD"
     gene            complement(17108..17665)
                     /locus_tag="VHX39_20320"
     CDS             complement(17108..17665)
                     /locus_tag="VHX39_20320"
                     /inference="COORDINATES: protein motif:HMM:NF017758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF892 family protein"
                     /protein_id="HEX3993522.1"
                     /translation="MQSEVRELLIEELKDAYSAEKQALRCMQKVLRKASSPALREGIQ
                     LHIEQTQTQIERVEQAMEKMEAKRGRKVCEAMRGLVEEAQHEVDEQDGKGPILDLVIV
                     AGMQRIEHYEIAAYGTNIALATALGEEEVANLLAETLEEEKMTDMKLTQVTQESIMPE
                     ALGSGEDSEGGLSGRKTGGSRAKAA"
     gene            complement(17716..18246)
                     /locus_tag="VHX39_20325"
     CDS             complement(17716..18246)
                     /locus_tag="VHX39_20325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX3993523.1"
                     /translation="MECLMNTESDQAKDIYLTGLRNQHAVEHQAIELLERQVGRLQNY
                     PEMEQRMRRHIEESREQARRLEDLLGHFDTSHSSFKDTMMSIAGNLAAMGHSTAPDEV
                     VKNTFANFAFEHYEIASYKSLLVLADLSGHSAGISALQASLREEQDMAAWIANHIDPT
                     VRRFVERSAANVTAGV"
     gene            complement(18532..>19342)
                     /locus_tag="VHX39_20330"
     CDS             complement(18532..>19342)
                     /locus_tag="VHX39_20330"
                     /inference="COORDINATES: protein motif:HMM:NF015426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TRCF domain-containing protein"
                     /protein_id="HEX3993524.1"
                     /translation="RDMLLATNIVEAGLDLPNANTMLIWHPDRFGLAQLHQLRGRVGR
                     GRVRAAAYLLTDPDHPPAKAAIKRLECFVGLDSLGAGFEVSIADLDQRGAGNLLGEEQ
                     AGHMHLIGTERYRHVLQRALALARGEQVPDDSTPEIVLGLPAYVPADFIPEPDIRLEI
                     YGRLVRLNSPSDLEDVRDELTDRFGTLPQALETLLELTRLRLLCRKIGIAAIHAGPAA
                     VALTPDDDRMEMLLRLKGSRKSGDRVILPLAEPSPAARFYRLLALLEGIAA"
BASE COUNT         3714 a         6122 c         5831 g         3675 t
ORIGIN      
        1 ctgaataatc gggctgagaa ttcacatcga ccgacacgac gacgagagtg gcggatgcaa
       61 cggttcaaag cgccccggca agcccaggac tttctctccg cccatgcctt catttacggc
      121 cgtttccgcc gacatcagct gccagccgct gactatcgcg agatccggtc gcacgccttc
      181 aacgtctggc accaggaaac aatcacccaa aacgcaacat gaccggcacg gtacgatgat
      241 cctcgccgtc acgtcgcccc gccccaggtt aacgtgacaa tgcccaacca agcaattcga
      301 cgaactcaac gggaaaccac gacgacgtct tcgggggcgc cttctttgcg gtagccgcta
      361 cttacacaag gcgaccgccc cttcgaagag aggacgagga tctctgccga gatttgcccc
      421 gctgacgctt taaaggaagc atcatgccta aaaccctaac tgatcttgct gctgcaggcg
      481 tcgccgtatg gttagatgac ctgagccgta tccgcatcca gtcgggcagt ctcaccagtt
      541 cggtcgagag gaacgaaatc gtcgggatca cgaccaatcc agcaatcttc gccaaagcca
      601 tcggcggtgg atttggctac gaagaccagg tgcgtgaact tgctcttcgt ggcacggcta
      661 ttggtgagtc gttgcggcta ttgacggctt gggacgtgcg cgctgcctgc gacattttgc
      721 gcccggtatt tgaccggacc gaggggcgcg atgggcgtgt ttcgattgaa gtagatcctc
      781 ggattgcgca agacagcgag cccatcgcgg ctgaggcccg cggcctctgc tggctggtgg
      841 accggccgaa cttgtttatc aaaattcccg ccgtgctggc cggtttgccg gcgatcacgg
      901 ggtcgctggc ggacgggatc agcgtcaacg tcacactaat tttctcaggg gaacgttatg
      961 aggcggtgct tgaggctttc ctgacgggcc tggaacaacg cgccgcgtca ggctgaagtt
     1021 tggaaggcgt cgagagcgtc gcctccttct tcgtcagccg tgtcgacacc gaggcggacc
     1081 ataggcttga ggaagtggcg gcgcgcgaca aaaacttgac aggcgacgta gcccggttgc
     1141 gaggacaggc cggcatcgcc aatagccgcc ttgcctacga agtttacgag aggatgctgc
     1201 agtcaccacg ttggaagtcg ctggcggcca agggtgctaa gccgcaacgg ttgctttggg
     1261 catcgaccgg ggtaaaggac aagtcgttcc ctgacacacg ctacgtcgtc gaactggttg
     1321 cgccagacac cgtcaacacg atgccggaag cgacactgca ggctgtggcc gatcatggtg
     1381 aagtgcgcgg gaacacgatc cgggggagct acgcggcggc acacgccatc atggaagatc
     1441 tgcgccgcgt tggaattgat gtggctgagg tggccgaact gctggaggcg caaggcaccg
     1501 cctcgttcga gaagagttgg gaggaactca ttgcgtccgt gactgagcaa ttggagaagg
     1561 ctggagcgtc cgtcatgccc tccggagcgg tgaagtcagc cagcggaagc ggggacacgg
     1621 ccaccccggc ggccgctgca ccaagccatg gccgaacaaa atgagagctc cactctatcg
     1681 ctattccaaa aagagttgac ccggcaccat cgacaccgat cgtcagtacg gtgctcaact
     1741 tcgccgagac gatcgtgcca agacccgaag aactacctgc gaaagtaaag caccggcgag
     1801 caatgcgaca ccacgtcaca gacgttcgat cacgtgtagc gatagggggg aactcgcatc
     1861 ccatcagatc ggcagcccga agccatggag acagaccagc agcgcgaccc ccgcccttca
     1921 acgccggcct gataaataca cattttcgtt tggtttgtgg aacgcgtagc ggggttgaac
     1981 gttgctccaa tgcgaaaata cgacccttgg agacacgaat gaaaccattg ctcctcgccg
     2041 gcttcctggc gctgtccagt gtagccgcct ttgcgcaagc aagcgcccag ccagccaatc
     2101 cgaagccgtc gacacccgcc gtcgcaacat cgacgacgcc tgcccctgct gccccagcgg
     2161 ccggcggcaa cagctttacc atggcgcagg cacaatcgcg cattgaggcc gccggctaca
     2221 gcaacgtgtc cggccttgcc aaggataagg atggcgtgtg gcgggggaca gccagcaaag
     2281 gcggcacgcc gaccgacgtc agcctggatt accagggcaa cgtcctcccg aaatagcggc
     2341 ccctgctcca ttcaaaaagg aaaagcacat gactcagaca gtcacagccc ttttcgatcg
     2401 ccacgaggac gccgcggcgg ctgtccgcaa tctggaaatc gtcggcattc ccgacgccga
     2461 tatcagcatg gtcgccaaca atacagagag ttggtacaag gcggatcagc cgtccaatgc
     2521 cgcgggtgac gcgggtgccg gggcgggcat tggcgcggtt gcgggcggtg gcgtcggcct
     2581 gcttaccggt cttggcatca tggcgatacc cggggtcggt cccgtcgtgg ccgccggctg
     2641 gcttgtcgct accgcggctg gcaccgtgct aggtgcggct gccggcggtg cggccggcgg
     2701 catcgtgggt gcgctgacca actccggcgt atcggagaca catgcacacg tctacgccga
     2761 aggcgtccgc cgcggcggta cgccggtgac ggcgcgcgtt gccgatgacc gtgtcgccga
     2821 agccaatggg atcctggatc gctcgcgcca agtgaatctt gacgcgcgag gcgatgccta
     2881 tcgccaaacc ggttggtcac gctttgatac cgacgcgccg gtttatacgg atgagcaggt
     2941 tagcagggaa cgcgacctgt atcggtaacg tccacttgtt catcaagcca gggccgcctg
     3001 tccttccgca ggggagaacg ggcggtctcg cagcatacgc gaactgatcc atcgacgtct
     3061 tcagtcatat tcaaaaacct gctccctcgt tggagccggc tctgacccca caaccgggag
     3121 gggtagcggg aacctacgac agttcgcccg cgttttcctg cttattgcaa cggactccgc
     3181 atgttcggtc ggatctggcg gctgctgcgc gacagcgtgc aggctttcat cgaggatgac
     3241 gcgcttagcc ggggagcgtc gatctccttc tataccgtta cctcaatcgg tcccatgttg
     3301 ttcatcgtca tcgccgtcgc cgggcttgcc ttcggtgagg acgcggcgcg cggtgcgatc
     3361 gcggcccgac tcagcgactt gacggggaaa gccagcgccg atctggtgca gactgcggtg
     3421 cagagcgcgt cagacaagtc gagcggtatc ctcgcctcgg tcgtgggcgc ggccaccttg
     3481 ctcataaccg cctccagcgt gttcggtgaa atgcaatcgg cactgaacgc aatctggaag
     3541 accaacctca gggcactatc gtttcgcgcc tggtgcggac tcgcgcggcg agcctcggtc
     3601 tggtcgcagc gctcggcttc ctgctgctgg tctctctggt gattagtgct ttagtgtccg
     3661 ggcttggcca ctacatcggc gcggtgctgc catttggcgc actgatccta cagatagtga
     3721 acttcgtgat ctcctacgtg ctgatctcgg ttctgttcgc cgcgatctac aaaatgttgc
     3781 ccgatgcaaa gctctgttgg gccgacgtcc tgttgggggc ggtgaccgtg ccggccgcag
     3841 agaggacggt cagcgctgct gtcaacaatg gtgcatcacg gtgcgtccga tcacacctcc
     3901 ccggccgcct tttgcaggac actggcgtac gctcggcttt cgctcacacg ccgctcatac
     3961 gacaccgccg cggcatcgcg gcccgatcgg cgggcatcat ccgccatctt ctgggtcaaa
     4021 gttgcacgtt cctccatgat ccgcagggcc acgcgaatgg cttcatcgac actgccctcc
     4081 gtcacctccg ccagggcttc ggccgtgtag gcgtgcccga cctggcagcg gaaccgaagc
     4141 gggggctgcc tgatctggga cagcacgccg ccgcacgcgg ggcacgacat cggcacgggg
     4201 tcggcaatcc cggcaatcac ctgggggtcg gaccgccgcc ccagcgcgat ttcgacctcg
     4261 gtcctgatat cggcgggaac cgcgaccgcc ggcccggctt cctcggtggt cagcttgacg
     4321 agcagctcgg ccaggcccga aagcggcgcg cgatagtcca cgtcactggc gagcagtgcc
     4381 cccgacggca tgtccggcgc gaacgcatcg gcgggacttt gcaccaccgt tattccgccg
     4441 cagcgtttga catcggccaa cccggccgcg ccgtcgttca gcatgccggt gagcaccacc
     4501 gcgatcgtcc gcggcccaaa cgacattccc acggatcgaa acagcgggtc gatcgctggc
     4561 cgggacatgt tttcccgtgg cccgcggccc agcttcacga cattgtcaat caccagaaga
     4621 tggtggtcgg ccggcgcgac atagccatga ccgggcgtga taacctcgcc atcaaccgcg
     4681 gtgcggatgg aaagcggcga tcgggcgtcg aagatgccgg caagtagatc cttacccact
     4741 gcgccaacat gaatgaccac gaacaatgtc gctgcaagat cggccggcaa cgcctcgcat
     4801 agttgcttca tcgcctccac ggcgccaagc gatcccccga tcgcgatgat gtcccgtcgt
     4861 cccatgcttt gcgccctcca cgtcttgaac tccggcagat ggccttggtt ctatccgttg
     4921 ccatccgacg gcgttagaca ttggtcgctc gtggtgatta acggacaggt cgcaggagga
     4981 tgaagccgat ggtggaaggg gggagcggaa tgcggcagga ttccgatccg ccgatcgtcg
     5041 ggatcggtgc gtcggcgggg ggtgtcatgg cccttcagag tttcttcgaa gcactgcctg
     5101 acgaacccga agccgcgttt gtcgtcgtca tccacctcgc gcctgaattc agaagccagc
     5161 tcgccagcat ccttgccacg cggaccccga tgccggtggt tcagatcgag caggccatga
     5221 ggctggaaaa gaaccacgtc tatgtgatcg ccccggacag tcggctgatg atcgccgacc
     5281 acacgatttc cgcctttccc ttcgatgaac cgcggtccca gcgcgcgccg atcgatttat
     5341 tttttcgctc gctcgccgaa cagcacaccg atgggttcgc ctatgcggtc atcctgaccg
     5401 gcgcgggggc cgacggcgcg atcggggtca gggcgatcaa ggaatcaggc ggcatcgtcc
     5461 tggttcagga tcccaatgaa gccgaatacg cctccatgcc gcgcagcgcg atcgccgccg
     5521 gcgtcgccga tttcgtcctg cctgtccgtg gcttggcgaa acagctcgtc gagcttctga
     5581 aggacgggca tgaagccgcg ccgggcttcg ggcctggcac tgatgaggcg atgcttcgcc
     5641 gcattctggc gcatctgcgc gtcaggatcg ggcatgattt cacgctgtat aagcgcgcga
     5701 ccattctgcg ccggatcgcc aggcgtgttc aggtcacgcg gaaggagtcg ctcgcggact
     5761 actatgattt cctgcgtgaa aacgccgaag aggcgcaatc gcttttcacc gacttcctga
     5821 tttcggtcac caccttcttt cgcgacccgg atgcgttcga gcttcttgcc cagaaagtga
     5881 tcccgcagtt gttcgaaggc aaggaagagg acggcaatat ccgcgtctgg gtgccaggct
     5941 gcgccaccgg cgaagaagcc tacacgatcg gcatcctgct gctggaggaa gcggcgcggc
     6001 gcgacctgcg accggaaatc caggtcttcg gttccgatct ggatgccggt gcgctggcca
     6061 tcggccgcga aggccgctat ccggcgacca tcgaggccga cgttcccgaa gaccggctgc
     6121 ggcggttttt ccaacgcgaa ggcgaccatt atcgggtacg ccgggagctt cgcgacatcg
     6181 tcctgttcgc gagccatagt ctgctgaggg acccgccgtt ttcacgcctg gacatgatct
     6241 cgtgccggaa ccttctcatt tatctcggcc gcgatttgca gcaccaggtc tgcaacacat
     6301 ttcattacgc tctcaatcaa ggtggcttcc tgttcctggg cgcatcggaa agcgctgatc
     6361 agccggtcgg gctgttccgg accatcgatc gcgatgcccg gatctatcga tcggtcaccg
     6421 gttccgctga caaacggccc gcgctgccca tcctggccgg tccgcggcag atgcctagcg
     6481 gcgaacccgc ggtgcctcgc ctgccgcccc ccggcgcgag tggcaacgat gccgcgtcgc
     6541 atcgccagat gctggaaagc atcgcaccgc ccagcatgct tgtggatgaa agccatcgcg
     6601 ccgttcacct gtcgcggagc gccggacggt ttctgcagct ttccggagga cctgtcagca
     6661 ccgaagccgc cgagatggtg cgggaagaat ttcgcttcga cctgagaacg gcattgcacc
     6721 gagccttcga ccgtggcgaa tccacgctca gcatgcaact gttggtccag ttcaacggct
     6781 ccaagcatcg tgtctacctg caggtcaagc cggtggtgca ggataacgac ccgacgcggt
     6841 acgcgttggt gctgttcata gaaggcgaag ccatcgacga ggaagtcccc gaaagcagcc
     6901 tggactggcg cgacggcgga tcggccggcg aaacggtcag gcaactgcgg gaggagcttc
     6961 agctcgcgca taatcgcctg cgcgcgaccc gggaagaatc cgaagccgcc aatgaggaac
     7021 tgcgcgctgc gaacgaagag ttgcagtcga tcaacgaaga gtatcggtcg acctccgagg
     7081 agctggaaac cagcaaggag gagcttcaat cgatcaacga agaactgcag accgtcaaca
     7141 atgagctcaa gctcaagctg gaaagcgtct cgcgcgccca cagcgatctg cagaacctga
     7201 tggcggcgac cgatttcggc acgctgtttc tcgattcctc tcttcgcatc aagcgcttca
     7261 cgccgcgcct gaccgaactc ttcaacataa cctcgagtga tgaggggcgg ccgatcacgg
     7321 acttcaccca ccagctcaaa tatgaagaaa tggccgacca cgcgcgccag gtcctgaaag
     7381 acctggcacc tgtcgagcat gaggtcgaaa gccaggacgg ttgctggtat tttgtgcgtg
     7441 tccggccgta ccgcaccgtc gacgacaaga tcgacggcgt ggtggcaacc ttcgtcaaca
     7501 tcaccgaacg ccgccgaggc gaggaagcgc tgcgcgagag tgaggcgcga ctgaggcagg
     7561 agacgcggct cgttgaactg tcacgctcgc cgattttcgt ctgggacctc gacaacggca
     7621 tcgttcaatg gaaccgcgga agtgaggaac tgtacggcta ttcccggcag gaggcgatcg
     7681 gacagcaaaa gaacattctg ctacgcacca ccgtgccggg ctcttcgttc gaaaacctgc
     7741 ggcaatcgct tatcgaacac cagacatgga acggcgagct gctgcatcga acgaagcgag
     7801 ggcaggttct gacggtcgaa agccagatcg agctcgtccc gatcggcacg cgccgcctgg
     7861 ttctcgaaag cacgcacgat gtcaccgatc gaaaaaagtg ggaacaccgc cagcaattgc
     7921 tgctcagcga actgagccat cgcgtcagca acaccctggc cgtggttcag tccatggcgc
     7981 gtcaaaccct gcgcacggcg gcctccgaac aggagttcgt cgaattgttc gaaggccgtc
     8041 tccattgtct ggcacgcgcg cacacgctgc tggtcgaagc acgatgggaa gggaccgagt
     8101 tcaaccacct cgcccttacc cagcttgccg cctatctggc cgatgatccg ccgcggctgc
     8161 gcatttcggg gccgccggtc acgttagcct cggacttcgc gacgccgttc ggcctggtgc
     8221 tgcacgaatt ggcgacgaac gcggcgaaat atggcgcact ttcggtggaa accggacggg
     8281 tgctgctgag ttggactctg gacgtggaga atggcacccg ggtcttccgc gtcacctggc
     8341 gggaaagcgg tgggccgccg gttaccgcac cggataagag gggttttggg ggtactttga
     8401 tcgagcggag tctcgcgggt gcgaccgtga ggcgtgagtt tgctcgcagt ggtttggtct
     8461 gcacgattga actcgaactt ccggaggatc gcggcgatgg aattcaactt tgagcgcgag
     8521 cgacctctgc gagggatgcg gatcctgatc gcggatgacg agtttctggt cgcgatcgcc
     8581 atcgaggaag cgttccgcga cgctggtgcc gatgtggtga ccgccgcgac gttggcagcc
     8641 gcgttaaaga gcgcgagggc cggtgacgtg ctctccgcgg cgttcctcga cgttcgcctg
     8701 ggccgcgaaa ccaccgaggt cgttgcggac gagctcgccg cccgcgccgt tccctttgcc
     8761 ttttacaccg gccaggcgct gccggatcat atccggcgga agcatcccga tatcaaggtg
     8821 cttatcaagc ccagcaagca ggagctgttt atctcaacga tcctggacat cgtcagacat
     8881 tgaccgcaca cgctggcagc gctggtccgc atgcctgcct gggaacgggc cgaacccatt
     8941 aacctgatgc ggctgccgtc ggcggttccc acacgacccg gtcgtatccc aggtccgttg
     9001 ccatcgtctc aacccacagc ttcacgctgg cggcgtccgt tttgacgtgc gagtctggga
     9061 atgcttcaac gccggcttcg tcttggttca tttcgcctgg gtattccgct ttgaaaacat
     9121 tcggttccac ctcgcgcata atagcgcgca gcgtgccttt ggagacttgg gtcatgttgg
     9181 gcctcacagg acgttcagca gccggtccgg ggtcatcggc agatgccgaa cccggtttcc
     9241 ggtcgcattg taaaccgcgt tggcgatggc cggtgcgacg cccgtcaaag cgatctccgc
     9301 cacgcctttc gaacccagtg gattgaagat cttgtcctca ccagggacga acagcgcatc
     9361 gagttcctgg atgtcggcat tcacggggac gagatattcg gccagattgg cattcatgat
     9421 gcggccgaga tgggaatccc actccgcctg ctccagcagc gccatgccga gcccgccgac
     9481 catgccgccg atgcactggc tgcgggcgat tttcggattg acgacggtgc cgatgtcata
     9541 ggcgccgatg atgcgcggca cgcgcaccac accgaacgcc ggatcgacca tcacttccac
     9601 aaacaccgcc ccgaaagcgg cgctggaata ggtcttggtt tcgtcaccag gcgccgcctg
     9661 tccttcggcc tccagctttt caacgccctg tgcctgcatc agggcaacca gatcgccgtc
     9721 gcctccgagc ttctgccgca ggttctgaca ggcggagacg acggcattgc cgacactggc
     9781 gagggtgatc gatccgccat ggaccggcgc ctccggcata tcggtatcgc caagttcgaa
     9841 gtggacgcgc tcgatcggca ggcccagggc gtcggcggca agttgcgtca tggcggtgta
     9901 ggtgcctggc cccatgtcgc tcgccgcggt ccgcacgacc gccgaaccgt tggcgaacaa
     9961 aatggcctgc gcgttggccg gcgcgcgatg cgagggatag aacgctgttc ccatgccgtg
    10021 gccgatcagc cacttgcctt ttcggttgcg tcccgggacc ggtgagcgct gcgaccagcc
    10081 gaagcgctcg ccgcccatcg cgtagcaaga gcgtaatgcc ttgctggacc acggaaggcc
    10141 cttgtcctcg tcgcgctccg catgattgcg cagccggaat tcgaccggat cgagaccaag
    10201 ttggtgcgcc atctcgtcca tcgccatttc caaggccatg acgccggtcg cggtgccggg
    10261 cgcgcgcatc ggacaaggtg aattgatgtt catttccacc agccggtacc gcgtcgcaac
    10321 attcggacag gcgtacagcg cgcgaggcgg atcgagagtg acctcggcat attcctcata
    10381 agtcgaggtc tggccccagg cttcctggac gatcgccgtc agcttgccat tgcggtcggc
    10441 tcccattcgc acccgctgtt cggtgcgcgg gcggccaccg acggaggtga aacattcgcg
    10501 tcgggtcaac tcgacccgga cgggccgccc gaccacgcga gccgccatgg ccgccatcgt
    10561 aacgtgcggc caggtgcgca gcgcggaacc gaaggcaccg ccgacataag gagaaatgac
    10621 atgaatcgcc cgttcgggaa tgccgaacac ccgcgatatc tccagccgca cgttgtcgac
    10681 ccattgggtc ttgtcgtaca gcgtcagctt ctcgccgtcc cattccgcga tcgttgcatg
    10741 cggttccatc gcgctgtgga tctcgcgttc atgagcgcaa tggatatcga tggtaaccgg
    10801 tgcgccggcc agggcagcct cgggatcgcc acgctgcttt tcacccgggc ggcccgactt
    10861 tgccaccgat tcgctgggcg cccgtccatc gccgaggcgc atttcggtca ccgccggggc
    10921 cgactcgtag gtcaccaaaa tggtggacgc agcggcatcg gcctgttcct gcgtctccgc
    10981 gaccacgagc gcgaccgtct ggccgctgaa cagcacatcc ggcccctgga agacgcgcaa
    11041 ttggtcgccc gactgcggat cgacctgcgg acggttttcc agcggctcgt aaggcagctt
    11101 cggcgcgttc agatgcgtga tcactgccag cactcctggc gacgactcag cctggaccgc
    11161 atccattgcc gttatgcgtc ccttggcgat cgtgctgcgg acctgggcgg cgaacgccat
    11221 gttgcgcaga cgaaactccg ccgcgtatgt cgcctgtccg gtgacttttt ccggtccccc
    11281 gaccctgctg atcgaacgtc cgacgaacgc gctcatatct ggccccccgc ggtcaagatc
    11341 acccgttcca cgacgcgaag cagaagtttc agcttgaatt catttccggc ataagccttc
    11401 gcgccttcga tcgataattg cgcggcggcg gacacggtga ccggatccaa tgcatggtcc
    11461 accagcgctt tttcgacatg cggcagaggc cacggcttgg tacccactcc tcccacggca
    11521 atgcgagccg ctcggattct gattccttcc atcttcaatc ccacagccgc ggacacgacc
    11581 ggccactcga atgtcgcgcg gtcgcgtact ttgacgtaag ccgatgtaga ggcgaattca
    11641 ttgagcggca ggacaatctc tgtaatgatc tcgccgggcc gcaatgtgga atccacagac
    11701 ggattgccgc ccggcatccg gtgtagatcc cgtatctcga tcgaccgttc accgttgggg
    11761 ctgcgcgcct ggacccgggc gtcgagggtg agtagggcga cggccatgtc gccgggatag
    11821 gcagcgatgc agtcagggct gccgcccagg actgcattcg ttcggctgac gccgctttgc
    11881 gcgggacagc ccgatccagg cacgcgcttg ttgcagggcg aggctttatc gcggaaatac
    11941 aggcagcgtg tccgctgcag caggttaccg ccgatggttt cgagattgcg cacctgcggt
    12001 gaggcagttt cgcgcaatgc ctagcatagc aaagggtaat aggtccggac atagggatca
    12061 tccgccacat cggacaggcg agccatcgca ccgatacggg cgcctttcga acctgcctgg
    12121 atgctggtca gcggcaggcg gctgatgtcg accaacattt ccgggttcgc gacgtcttcc
    12181 cgcagcaact gcatcacgtc agtggcgccc gccacgtaca gggcgttcgg gttactggcc
    12241 caggcttcga acgccatcgt ttcgccgcgg gcgatcgcat aggagaatgg ggtcatttcg
    12301 aggtctccgc gacggacggg atcgcctaga cgatgccggg ataggcaccg cagcggcaga
    12361 tattgccgct catttcctcg cgaatctggg cgagggagcc ggccctgtcc tcccgcaaca
    12421 aaccgacggc ggacatgatc tgtcccggtg tgcagtagcc gcactggaac ccatcggatg
    12481 cagcgcgccg tcgcgagaca agccctcgat cgtttcgata tcgccgctct cggccatcac
    12541 tgcgaagacc aggcaggccg tcacgcgccg gccgtccagc aagacagtgc aagccccgca
    12601 ttggccaagg tcgcatccgc gttttgtgcc ggtccgatgc agccgatcac gaagtgcatc
    12661 cagcagcgtg gtacgcgcat cgacggtaac cacgtgcctt tggccgttga cgttcaggac
    12721 gatcccgaag gtcgaggacg cgccgctgtg gccttcctgc tgaggaggcg aagcgaggtc
    12781 ctggtcttgc aggaccgtca gcgtctcatc tggatccagc ccttcggctt cggcgaacag
    12841 agcctcggcc ttttcctgat cgccaaccgt tccgcgtgca acgcttgttc ggtcagggca
    12901 cgggccggac gccgccgtcc attcgcgtcg ttactgtcgg tcattccgga cccatcacaa
    12961 agtcggacct ctcggattgc cgcggcatgg cgatgcgtgt atcgtcgatc aggcggcttg
    13021 caacgacagc aacttcactg tttcgccgta cctggttgtg ccatgcggcg atgtgcctcg
    13081 gccagcaagt cggatggggt caccagggct attgccgatt gcaacttgtt ctgccacccc
    13141 gtcacgacgt ccccatcccc gttcatcatc gccttgaatc cggtttcagc gacatccgcg
    13201 gcatcatcct ttttgccgga accaattttc gtatccatca tatcggcacg ctcaaagaaa
    13261 tcggtttcag tcgcccccgg catcaggcag gtaacagtga cgcgcgtttc cttcagctca
    13321 tgtcgaagtg caaatgaaaa tgagtcgagg aaggctttag tcccattata cacagcctga
    13381 tacgtgcccg gcatgaagcc ggcgatcgat ccggtgatca ggatgcggcc ttggccgcgc
    13441 gatcgcatat cgcgaccgac tttctgcaaa agatagagtg tgccggtgat attcgtatcg
    13501 accacccggc gaacagcatt gaagtcctgg tccaggaagc ctttgccaag gccgcggccg
    13561 gcattcgcaa gcagtgcctc gactgtccgg ccgccgattg ccgtgtacaa tttgtccacg
    13621 ccctgtatag tggccagatc ggcttcaacc gcatcgaccg aaacacccat atcacggaat
    13681 gcagaagccg ccgtatggat cgcggcttcg tccgctgcca ccaacagatc gaaaccattc
    13741 ctggcacagc atttcgccag ttcgaaacca attccggtag atgcacctgt cacgacagcg
    13801 agcgaacgga gtttatcgat cattgttcga atctccggtc tagggtttca gcacgacctt
    13861 gatgcagcca tccttcttgt ctcgaaaagt cttgtagagt tccggaccct cctgaagcga
    13921 cgctcggtga gtgatgacga acgagggatc gatctcgcct ttctggatgc ggtccatcag
    13981 catcggcagg taatgctgca cgggggtctg cgccatgcga aatgtgagcc cgcggttgat
    14041 ggccgatccc atgggaacct tgtcgaggaa accgccatac acgccgacga tcgacacggt
    14101 gccgaaattg cggcagcagt ggatcgcctg ccgcagcaca tgcggccgat cggtgcccat
    14161 gaacgtggca acctttatcc ggtcgacgac cgaatcaaag ctggccgtgg catcggcttc
    14221 cgtgccgacg gcgtcgatgc acgcatcggc acccctgcca tttgtcagat cctgaattcg
    14281 gtcataaatg tcgtcttcct tgaaatccaa cgtcagggca cccgcctgcc gggcaagcgt
    14341 caggcgctcg gggactgtat cgatcgcaat gacccgctcg gcgccgagaa ggaaagcgct
    14401 ccgaatggcg aactgcccga ccgggccgca gccccagatc gctatggtgt cgcccttctg
    14461 gatattacag aaatccgccg ccatgtaacc tgtcgggaaa atatcagaca ggaacagcac
    14521 ttgttcatcg ctcaggccgt ccggcatctt gacgggccca acgtcggcga aaggaacgcg
    14581 aagatattcc gcctggcctc cagcgtatcc gcccagcagg tgcgaatagc caaacaggcc
    14641 ggcgggggaa tggccccaca ccttctcggc tttcttgtga tcaggattgg accgttcgca
    14701 gccggagaaa aatccgcgct tgcagaagaa acactctccg caggaaatag taaagggaac
    14761 cacaacgcgg tcgccgggct tcagccctcg gacctcggca ccgacttcaa cgacttcgcc
    14821 catcgtctca tgacccagca cgtcgccatg ctgcatcgac gggatcattc cgtcatagat
    14881 gtggaggtcg gacccgcaga tcgcgcaggc ggtgaccttg atgatcgcat cttgcggttg
    14941 ttcgatggtc gggtcaggga cggtttcgca gcgcatgtcg cccttaccgt gccatgttag
    15001 cgccctcatg ccaccacctc tattttgaat gtagcaatcg aatgaatgga gcggggttat
    15061 gttccatttt taaacgctca agttgctgcg atcaatcaag caagtttgtc gttcgacatt
    15121 ggttggacct ccattcgacg ggcagcctga agataagtct ggaaaccagc cacaatggta
    15181 gatcgagcgg taatgcgcgg agtgctgagg aaccctggcc gcagctgatc gttaccggct
    15241 ccatggcacc cactgaccat atcaaaggcg gacctcggcc agcgaagcgg gcgcgtcgtc
    15301 gcctgcccag gcagaacccc gttcgatcgg gcccaaaagg gaaagccgcg gcggtgccga
    15361 gacacccgat aagctctgac cggcgaccgt agcgccgccc cgcacgcgaa gctggatagg
    15421 ctgacggagc aacgcgctga tttacccgca ggcagcctgc cgggccctta cgaaaacagg
    15481 acgccgccgc cgaacgcccc ttcgccgatc aagccggcag tggcggtagc atcaccggcc
    15541 cgtaaccatg acagtgggga atgctgacca ggatgggtgg gcgttcagag accacaaagg
    15601 cagcgaacga acgatgataa accgcgatcc ctgcaaataa ttcgggaacc actcggtcca
    15661 tcgcaggtta ctgacattgt tcctccccaa cctaagcggt gcggcgtggc accgcttctt
    15721 tttgattggc ggacgcgcat gaatgtattg gtgctggctg gcgcaacgca cttggcagct
    15781 atctcgcggg tgcttatcag gccctgcatg acgcgggaga agaacccgac tggatcgcag
    15841 gaacgtcgat cggcgcgatc acccgcgcgc tcattaccgg caacccaccg gaacgccggg
    15901 ttgcacggct gcgcgagttc tggtcggaaa tcagtggccc caactgactg ccttggcttc
    15961 ggggctctag ctggatgaac gcgctgcaaa cgcggctggc cggccggccc gccttctttc
    16021 atccgcatct gtcattccta tcgagactgc cgcatcgcat tggtctctac ggcaccgatc
    16081 caatgcggcg cagcctggag aaattgattg acttcgacct gctgaacgct ggtcccacac
    16141 gcctgtccgt gcttgcggtc gatctgcgga ccggagagga agttgccttc tataccaccc
    16201 ggacccgcct cactgtcgat cacctgatgg cgagtgcagc actgatcccc gactttccgc
    16261 ctgtacaaat cggcgagcga tggccggtgg acggcggcct ggccgcgaac gtgcccatcg
    16321 acgtcgtgct acaggacgcc ggcgcgggcg atctgatctg ctacctcgtc gatctgttcc
    16381 cgatcgacgc gccgttgccc gacgacctag ccggcatggc aaatgcgcca gtccgacctg
    16441 atgttttcgt gccagaccga gcgctcgctg cgcgcttgga cagcccgtta cggcgccatc
    16501 tccgagcaaa ggcagcgcat cgacatcgtg cgcacgtcgt atgcggcgga tgccgtcggg
    16561 accgcaatga agtcgtggga tttctcggaa acggcagggt ctcgccgctg gaccgcggga
    16621 tgtcgggaca tgcaggcggc actacaggaa tttcgcttcc gtccccccgg cgaactcggc
    16681 ctcgatgttc agccgatcgt gcgttcgcga gcgtgagttc ttcttcacaa gcggtgaaac
    16741 cgaacgtgac gccggggagt tctaccgatg ctcgatttca acatcaggag cagtcaaatg
    16801 accagcaaaa gtgagcattc ttcgacatcc gacaagaagg cagagggcca gaaaggcgtg
    16861 acgcaagagc aggtcggcag cggcaagaag aatgatccga acaacttcgc ctacaactcg
    16921 gaacgggcgt ccgccgccgg ccgcaagggt ggccatgaaa gtcacaaagg cgactgaacg
    16981 ttgcgtaccc gccggtcctg gaccggcggg tttcgccagg cttcttcgta caatccgctc
    17041 acactgatgc cacggactca aaaaaagctg gccgggaggc ggcgaaccgc ctccccgcgc
    17101 cgctccgtca ggccgctttg gctcggctgc cgccggtctt ccgcccggac aatccgccct
    17161 cgctgtcttc gccagagccc aatgcctccg gcatgatcga ctcctgcgtc acctgcgtca
    17221 gcttcatgtc ggtcatcttc tcttcttcca gggtctccgc aagaagattg gcgacttcct
    17281 cttcaccgag tgcggtggcc aacgcaatgt tggttccata cgcagcgatc tcatagtgct
    17341 cgatccgttg catgccggcg acgatgacga ggtccaggat gggccctttg ccgtcctgtt
    17401 cgtcaacctc gtgctgggct tcttcaacca ggccgcgcat cgcctcgcag accttccggc
    17461 cacgcttggc ctccattttc tccatcgcct gctcgacgcg ttcgatctgc gtctgcgtct
    17521 gctcgatgtg caactggatg ccttcgcgaa gggccggcga actcgccttc ctcagcacct
    17581 tttgcatgca gcgcagcgcc tgtttctcgg cactgtaggc gtcttttagc tcttcgataa
    17641 gcagttcgcg aacttcggat tgcatgatca gttcctttac ttggttttag gatggcggcg
    17701 tatggaccct ggcgactaca cgcccgcggt cacgttggcc gccgatcgct ccacgaatcg
    17761 ccggacggtc ggatcgatgt ggtttgcgat ccacgccgcc atgtcctgct cttcgcgaag
    17821 agatgcttgt aatgcgctga taccggcgct gtgaccggag agatcagcca gaaccagcaa
    17881 cgatttatag ctggctattt cgtagtgttc gaaggcgaag ttcgcgaacg tgttcttcac
    17941 gacttcgtcc ggcgcggtgc tgtggcccat ggccgccaga ttgccggcga tcgacatcat
    18001 cgtgtccttg aatgacgaat gcgacgtgtc gaaatggccc agaagatcct caaggcgtcg
    18061 cgcctgctcg cggctctcct cgatgtgccg tcgcatgcgc tgctccattt caggatagtt
    18121 ctgcaaccgg ccaacctgac gttcgagcaa ctcaatcgct tgatgttcga ccgcgtgctg
    18181 gttccgcagg ccggtgagat agatgtcctt cgcttggtcg gattcagtgt tcatcaggca
    18241 ctccatgtca aggatgccct acaaaccggt aagccgcgcc caagttgcgc atcacgggtc
    18301 agttactttc gtttcgaaac atcgccctgc atgtaccagc gaaacagccc cgcggcgacc
    18361 ggccatactg cggtcgtcga aatgcacgca aatttccatg agtgaagcgg tgcgcgccgc
    18421 accacgctcg tgacggacct acctggcagc aatcatttcg cgatgtttag aagtcatcac
    18481 gcccggttga ttcggcggac ggcaatacaa gaccgtgaac aatgcatcgg ctcaggccgc
    18541 gatcccttca agcaacgcca gcagacggta gaacctggcc gccggggacg gctcggccaa
    18601 cggcaggatg acgcgatccc cggacttgcg cgatcctttc aggcgtaaca gcatctccat
    18661 ccgatcgtcg tctggtgtca gcgcgaccgc cgccggtccg gcatgaatgg ctgcgatgcc
    18721 aatcttccgg cacagcaggc gcaaacgggt cagctcaagc aacgtctcaa gcgcctgcgg
    18781 cagcgtcccg aaacgatctg tcagctcatc ccgcacgtcc tccagatcgc tcggcgagtt
    18841 caaccgaaca agccggccat agatttccag cctgatgtca ggttcgggga tgaagtcagc
    18901 cggcacatac gccggaagac cgagtacaat ctccggcgta ctgtcgtcgg gaacctgttc
    18961 accgcgagcc aacgccagcg cacgctgcag gacgtgccgg tatcgttccg taccgatcag
    19021 gtgcatgtgg ccggcctgtt cctcccccag cagattgccc gccccccgct gatccaggtc
    19081 ggcaatgctc acctcgaaac cggcacccag gctgtccaac ccaacaaaac actccagccg
    19141 cttgatggcg gcttttgcgg gcggatgatc cggatcggtc aacagatagg ccgcggcccg
    19201 aacccgcccg cgcccgaccc gtccccgcaa ctgatgcagt tgcgccaggc cgaaccggtc
    19261 gggatgccag atcagcatcg tgttggcgtt cggcagatcc aggcccgcct cgacgatgtt
    19321 cgtggccagc aacatgtcgc gg
//
LOCUS       DATAVD010001065         3330 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2708288, whole genome shotgun sequence.
ACCESSION   DATAVD010001065 DATAVD010000000
VERSION     DATAVD010001065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3330
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2708288"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VHX39_20335"
     CDS             complement(<1..183)
                     /locus_tag="VHX39_20335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993525.1"
                     /translation="MLDDIATWLTETWSGFVRFVEFNPGPLYATLLVVSALLFSITIG
                     VFAARLRGLRVRTRQLS"
     gene            complement(198..1028)
                     /locus_tag="VHX39_20340"
     CDS             complement(198..1028)
                     /locus_tag="VHX39_20340"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HEX3993526.1"
                     /translation="MRAFGDHRQRDAGFPAVQRAEASAGRDTAAKERFRLFASRRKHA
                     VPPGQRVYAIGDVHGRNDLLRFVLGTIVAEAARSPLQTHLVLLGDYIDRGPDSRDVID
                     MLLHLPGTLRTHFLRGNHEQALLDFLDRPLTYPEWRDFGADATLLSYGVRPPPSIDTA
                     ALIATRNQLEQRMPAEHLRFFSTLVPSVSIGDYLFVHAGVRPGVPLDRQDAGDLMWIR
                     DEFLSSSNDHGKLVVHGHTPIAEPVFRPNRIGIDTGAYATGRLTALVLEGRQQRVFCS
                     "
     gene            complement(1142..1489)
                     /locus_tag="VHX39_20345"
     CDS             complement(1142..1489)
                     /locus_tag="VHX39_20345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993527.1"
                     /translation="MRFGPALGMVSACMFFAGSIAYADDAVSMDAALPSQPVAEQPMA
                     PVANVQLAAVSTAPIGQVKAPVADPLHADTRWPLFANCINNTATPDAFQACLQMAFLG
                     TGPNDQVLALLTH"
     gene            complement(1626..1850)
                     /locus_tag="VHX39_20350"
     CDS             complement(1626..1850)
                     /locus_tag="VHX39_20350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993528.1"
                     /translation="MSGIYYALSIIAIVVVIHWFIINDGRKQGEPTKGLLAIREATAP
                     VVPAPSGSSRQRGKAPQANGENGGPAGPAA"
     gene            complement(1864..>3330)
                     /locus_tag="VHX39_20355"
     CDS             complement(1864..>3330)
                     /locus_tag="VHX39_20355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993529.1"
                     /translation="LRIEANVENDWTFVPGPRTEFYDADIQAHGKTVYTHAGISQPSH
                     TRWRFGFWWQEPVGTYVRQNLAYLQKAHVVPHYDPAISVSTSALTELFEKFDASARGP
                     MTSGILEKYMPTTGGRWDIGPLPHWQVLYLLTMNPHAYAVMLQTADQGASYASHYRNE
                     KTRRPVTLDDYPKLSTHSNMVGRDASQLPLPQTGGYKDPLEPDAAHEPALDFLPYLVT
                     GDRFYLEELQFWAEWNLTGTDPVYRNFAQGLVKFDQVRAQAWSLRTLAQAAYITPNAS
                     PLKGTFLRQLKANVGWYESTYAKNLSVNQLHLIPQNDAPYDGGRAIAPWQDDFFTWSA
                     GYVQGLGDAEALPLVRWKGGFSVGRLTAPGFCWIIGSAYTLRVRASAQSDYYRTFANV
                     YDASLPALLKQPAEPGRKLACASPEMAAALGLNNAGEMVAEPTSTDGYSAYMQSAVAA
                     AVDAGTPGAETAWRVLNDRSSKPDFSKDPTWAIVPWDK"
BASE COUNT          646 a         1002 c         1049 g          633 t
ORIGIN      
        1 cgaaagctgt cgcgtccgaa cccgcagacc acgcagacgc gcggcgaaaa caccgatcgt
       61 tatgctgaac agcaaggcgc tgacgacaag cagtgtggca tagagcggtc cgggattgaa
      121 ttccacgaac cggacgaatc cggaccacgt ctcggtcagc caggtcgcga tgtcgtcaag
      181 catgtgaagt cacgggttca actgcaaaag actctttgct gccgcccttc gaggaccagc
      241 gcggtcaacc ggcctgtcgc atacgcaccg gtatcgatgc cgatccggtt cggccggaag
      301 accggctccg caatcggcgt atggccatgg acgacgagct tcccatgatc gttggacgat
      361 gaaagaaatt cgtcgcggat ccacatcagg tcgccggcgt cttgacggtc gagcggaacg
      421 ccggggcgaa cgccggcatg gacgaagaga tagtcgccga tcgagaccga aggaacgagc
      481 gtggagaaaa agcgcaaatg ctctgccggc atgcgctgct ccagctggtt ccgggtcgcg
      541 atcaaagctg ccgtatcgat cgacggcggc ggccgcacac catagctgag cagcgttgca
      601 tcggctccga agtcccgcca ttcgggatac gtcagcgggc gatccaggaa atcgagcaag
      661 gcctgctcat gattgccgcg cagaaaatgc gtccggagcg tgcctgggag gtgcagcagc
      721 atgtcgatca cgtcacggga atccggaccg cgatcgatgt aatcccccag aaggaccaaa
      781 tgcgtttgaa gcggcgagcg ggcggcctcg gccacgatcg ttccaagcac gaaccgcaaa
      841 agatcgttgc ggccgtgaac gtcgccgatc gcgtaaacgc gctgtccggg aggaacggca
      901 tgcttcctcc ggcttgcgaa aagccgaaaa cgttccttgg ccgcggtgtc gcgacccgca
      961 gaagcctccg cccgctgcac cgccggaaac ccggcgtcgc gctgccgatg atcgccaaat
     1021 gccctcataa ggcttctgta acacgacgaa gcggtcgcgc ctacagaagc cccaacggga
     1081 cattaatcac gatccgtaag attcaccgcg agccttggcg gacggcggcg aacccgcttt
     1141 gtcagtgcgt cagaagcgcc agaacctggt cgttcggtcc ggtgcccagg aacgccatct
     1201 gcaggcaggc ctgaaatgcg tcgggtgttg ccgtgttgtt gatgcagttc gcgaacagcg
     1261 gccagcgtgt gtctgcgtga agcggatccg caaccggagc cttgacctgg ccgatcggcg
     1321 cggtgctcac ggcagcaagc tgcacgttgg cgaccggtgc catcggttgc tctgcgacgg
     1381 gctgcgacgg gagcgccgcg tccatcgaga cagcatcgtc ggcgtatgca atcgagcctg
     1441 cgaagaacat gcaggcactt accattccca atgcgggacc gaatctcatg ttggtctcct
     1501 atgtttgttg cttaagggtc tcatagggac gtgagaaaac ggttaattca ccggctttgg
     1561 acagggccgt cgagcgcgga cgtcgctctg tctacggatg attttcccgc attgtgtgcg
     1621 aaatatcagg cggctggtcc tgccgggccg ccgttctcgc cgttcgcttg cggtgctttc
     1681 cctcgttgcc tgctgctgcc cgacggtgcc ggaacaaccg gagccgtggc ctcgcgaatg
     1741 gccaacagcc ctttggtggg ctcgccttgt ttccgtccgt cgttgataat gaaccaatga
     1801 atgacgacga cgatcgctat gatcgatagc gcatagtaga taccgctcac cggacgatct
     1861 cgctcatttg tcccatggga cgatggccca ggtcggatcc ttcgagaagt ccggcttcga
     1921 cgacctgtcg ttcagcaccc gccacgctgt ttccgcgccg ggggttccgg catcgaccgc
     1981 ggccgcgact gcggactgca tataggccga gtagccgtcc gtcgatgttg gctcggcaac
     2041 catttcgccg gcgttgttca acccgagtgc tgccgccatc tcaggactgg cgcaggccag
     2101 cttgcggcca ggttcagctg gctgcttgag cagcgccggc aggcttgcat cgtagacgtt
     2161 ggcgaaagtc cgatagtagt cggactgggc actggcccgc acccgcaggg tgtaggcaga
     2221 gccgattatc cagcagaacc ccggagccgt cagtcttcca accgaaaagc cgcctttcca
     2281 gcgaacgagc ggcagggcct ccgcgtcccc cagcccctgc acgtagccgg cactccaggt
     2341 gaagaaatcg tcttgccacg gagcgatggc gcgccctccg tcataaggag cgtcgttctg
     2401 cggaatgaga tgcaattggt tgaccgagag atttttggcg tatgtgctct cgtaccagcc
     2461 gacattcgcc ttcaactgcc tcaggaacgt gcctttcagc gggctggcgt tgggcgtgat
     2521 gtaggccgct tgtgcgaggg ttcgcagcga ccacgcctgg gcacgcacct gatcgaactt
     2581 caccaaccct tgcgcgaaat tccggtacac gggatcggtg ccggtaaggt tccactccgc
     2641 ccagaattgc aactcttcca ggtagaagcg gtctcctgtg acgagatagg gaagaaaatc
     2701 gagcgcgggt tcgtgcgccg cgtcgggttc gagcgggtct ttgtatccgc ccgtctgtgg
     2761 caagggcagt tgactggcgt ctctgccgac catgtttgaa tgcgtgctga gcttcggata
     2821 atcgtcgagc gtcaccggcc ggcgggtttt ctcgttgcgg taatgcgagg cgtagctggc
     2881 gccctgatcc gccgtctgca gcatcacggc gtaggcgtgc ggattcatcg tcaggagata
     2941 gagaacctgc caatggggca gggggccgat gtcccagcgg ccgcccgtcg tcggcatgta
     3001 cttctcgaga atgcccgacg tcatcggtcc gcgcgccgag gcatcgaatt tttcgaacaa
     3061 ctcggtcagc gccgaggttg aaaccgaaat cgccggatcg tagtgcggta ccacatgggc
     3121 cttttgcagg taggcgaggt tctgtcgcac atacgtaccg acgggctcct gccaccagaa
     3181 gccaaagcgc cagcgggtat ggctcggctg cgagataccc gcatgggtgt agacggtctt
     3241 cccgtgcgct tgaatgtcag cgtcgtagaa ctcggtcctg ggacccggga caaaggtcca
     3301 gtcgttttcg acattggctt cgatccgaag
//
LOCUS       DATAVD010001066         2515 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_474323, whole genome shotgun sequence.
ACCESSION   DATAVD010001066 DATAVD010000000
VERSION     DATAVD010001066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2515
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_474323"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1035
                     /locus_tag="VHX39_20360"
     CDS             <1..1035
                     /locus_tag="VHX39_20360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993530.1"
                     /translation="MAGDIGARLNFYMDCIGGGSSTEALIGIAVGVMEAGLCNCVAIF
                     RAMNGFSQVRIGGTGARSAAPVNGDMLHNRAYGWQSAGQSFAPTFMRHMYDYGTKPEQ
                     VAMVKVVHSEHASNNPKAYYKKRFTVDEVLNSRIICKPLHLLDCCVETDNATAIIVTR
                     AERAKDLKHKSPLIRGIVGRCSKPRMDMHYQHGPISRVAGYYAKDILWPNAGVGPEDI
                     DAVGAYDAFTFTSMLQLEDYGFCKKGEGGEYVSSGITRLGGRRPQNTSGGHLCEGYTH
                     GMNMVIENVRQLRGTVDDSCPVDANGVCQHTYDYREGGCRAVKNVEVTANLGWANPLT
                     GSAMVMRRSF"
     gene            1050..1571
                     /locus_tag="VHX39_20365"
     CDS             1050..1571
                     /locus_tag="VHX39_20365"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HEX3993531.1"
                     /translation="MSVRGDYMGMALSIDDLDGENIGYFKHCAEHNFHLQKCDECSLL
                     RYPPTTACPFCSCGTSSWAPVEGKGAVYSYLEVHHAIQPAFKAKTPYMVLLVELDTQQ
                     AKPTEDDGLRVIANLTLPNGEFAPADVVKSVGIGTRVRMVFSDVSDGLALPQWTIDET
                     ATQPAKPWRYPQE"
     gene            1622..2515
                     /locus_tag="VHX39_20370"
     CDS             1622..2515
                     /locus_tag="VHX39_20370"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX3993532.1"
                     /translation="MTPEQILTHPPSVLTEAQRQSYFRSGYLAAEGLIPDAWMHRLRE
                     LSAEFLEASKAVAASNEAFDLGPQHRPDQPHVRRLRALVDRHPDFWRFASESVLADIA
                     ADLVGPDVKFHSAKLNYKWPGFAETVDWHQDIPAWPHTNYSPVTLGVYLDDVPAEQGP
                     LTCVQGSHQGTIFVHRNDSGNWTGSIQERDMLTVDRSRAEDLTGAAGTVIAINCRTVH
                     ASRANLTDRVRPVALFVYSSADAFPWTAAPTPTSHTGDIVRGRVAQMAQLDATPCPVP
                     PDWSEIGYGSIFSVQRSGEAS"
BASE COUNT          497 a          743 c          772 g          503 t
ORIGIN      
        1 atggcgggcg atatcggcgc gcggctgaat ttctatatgg attgcatcgg cggcggttcc
       61 tcgaccgagg cgctgatcgg catcgctgtc ggtgtcatgg aagccggcct gtgcaactgc
      121 gttgcgatct tccgcgcgat gaacgggttc tcgcaggttc ggatcggcgg caccggggca
      181 cgctctgcag cacctgtcaa cggcgatatg ctgcacaatc gcgcttacgg ctggcagagc
      241 gccggccaga gtttcgcacc gaccttcatg cgccacatgt atgactacgg caccaaaccc
      301 gaacaggttg ccatggtaaa agtcgtgcat tccgagcacg cgtcgaacaa cccgaaagct
      361 tactacaaga agcgcttcac cgtggatgaa gtgctgaaca gccgcatcat ctgcaagccg
      421 ctgcacctgc tggattgctg tgtggagacc gacaacgcca ccgcgatcat cgtgacccgg
      481 gccgagcgcg ccaaagacct gaagcacaaa tcgccgctga tccgcggcat cgtcgggcgt
      541 tgcagcaagc cgcggatgga catgcactac cagcacggcc cgatttcccg ggtcgccggt
      601 tattacgcca aggacattct ttggccgaat gccggcgtcg ggcctgagga tatcgatgcc
      661 gtgggtgcct atgacgcgtt taccttcacc tccatgctgc aactggaaga ttacgggttc
      721 tgcaagaagg gcgagggtgg cgaatacgtg tcctccggca tcacgcgcct tggcggcagg
      781 cggccgcaga acacgtcggg tggtcatctg tgcgaaggtt acacgcacgg catgaacatg
      841 gtgatcgaga atgtgcgtca gttgcgaggc accgtcgatg atagctgccc ggtggatgcg
      901 aatggggtgt gccagcatac ctatgattat cgtgagggtg gctgtcgcgc cgtcaaaaac
      961 gtcgaagtta ccgccaatct cggctgggcc aatccgttga ccggatcggc catggtcatg
     1021 cggcgcagct tctaagggag aaccagaaca tgtccgtccg aggcgattac atgggaatgg
     1081 cgctgtcgat cgacgatctc gacggtgaga atatcggcta tttcaaacac tgcgccgagc
     1141 acaactttca tctgcagaaa tgcgatgaat gctcgctgct gcgctatcca cccaccacag
     1201 cctgtccgtt ctgctcctgt ggcacttctt cctgggctcc ggtggagggg aagggtgccg
     1261 tctattccta cctcgaagtt catcacgcca ttcagccggc attcaaagcc aagacgccgt
     1321 acatggtttt gctggtggaa cttgacaccc agcaggccaa gccgacagag gatgacggat
     1381 tgcgtgtcat tgccaatctg acgttgccaa atggcgagtt tgcgccggcg gatgttgtga
     1441 aatcggttgg catcggcacg cgggtacgca tggtgttctc cgatgtgtcc gatggcctgg
     1501 ctctgccgca atggacgatc gatgagaccg cgacgcaacc ggcaaagccc tggcggtatc
     1561 cgcaggagta gtttcagacc gtcatggccc ggcttgtccg ggccacccct ggcaggttgt
     1621 catgacaccg gaacagattc tgacccatcc gccttcagtg ctgaccgagg cgcaacgaca
     1681 aagctacttc cgtagcggct acctcgccgc cgaagggctg atccctgacg cctggatgca
     1741 tcgcctgcgc gaattgtcgg ccgaatttct ggaggccagc aaggcggttg cggcatcgaa
     1801 cgaagcgttc gatctcggcc cgcaacatcg tccggatcag ccgcatgtgc ggcgcttacg
     1861 ggcgctggtc gaccggcatc cggatttctg gcggttcgcc agcgagtcgg tactggccga
     1921 tatcgctgcc gacctggtcg ggcccgatgt caaattccac agtgcgaaat tgaactacaa
     1981 atggccaggg tttgccgaaa cggtcgattg gcaccaggat atccccgcct ggccgcatac
     2041 caattattcc ccggtcacct tgggcgtgta tctcgatgac gttccggctg agcaagggcc
     2101 tttgacatgc gttcagggat cgcatcaagg cacgatcttc gtccaccgca atgattccgg
     2161 taactggacc ggatcgatcc aggaacgcga catgctgaca gtggatcggt ctcgcgccga
     2221 agatctgacc ggcgccgccg gtacggtgat cgcgatcaac tgccggaccg tccacgcctc
     2281 ccgcgccaat ttaaccgatc gcgtgcggcc tgtggctttg tttgtctaca gttcggccga
     2341 cgcgtttccc tggaccgcgg cgccgacgcc gaccagtcac accggagata tcgtgcgcgg
     2401 gcgggttgct cagatggcac aattggatgc aacgccatgc ccggtaccgc cggactggag
     2461 cgagatcggc tatggctcga tcttcagtgt gcaacgtagc ggggaggcga gttag
//
LOCUS       DATAVD010001067         2000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1776894, whole genome shotgun sequence.
ACCESSION   DATAVD010001067 DATAVD010000000
VERSION     DATAVD010001067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1776894"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..891)
                     /locus_tag="VHX39_20375"
     CDS             complement(<1..891)
                     /locus_tag="VHX39_20375"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3993533.1"
                     /translation="MNQSERAIMNGGDIIVDFLTRQKVPYLFGLCGHGNVGFLDAAFK
                     AQDRIRTISVHHEQTAGHMADAYFKVRHEPVATFTSCGPGSANLVMALAAAMMDSSAF
                     FAITGNVPTSQFNRNPFQETGRYYQGDFPSVIRPYVKRSYQPTRVDMMPLAVRQGWEL
                     MLSGRPGPVNLDVPLNVFVEEAEVTPPQASARIVNAAPGNPEALTAALKVLLAAERPV
                     IIAGQGVLLAEAVPALQEFAELTSIPVVTSPNGKGSISERHRLAFGSIGRNGTYAANV
                     ATRNADVILALGFTFDDRATS"
     gene            complement(905..1705)
                     /locus_tag="VHX39_20380"
     CDS             complement(905..1705)
                     /locus_tag="VHX39_20380"
                     /inference="COORDINATES: protein motif:HMM:NF013757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEX3993534.1"
                     /translation="MRNADEPPRDPYRLGSLTKGLELLDCFARQETWSLAELATELGQ
                     SKPTVFRILHTIEDFGYLQKDHVTGRYSLAMRFHTLGSSAVRHEQLRWQALPPLQDLA
                     RETGETVHVGILYDGEAICVQAVDGTRLIRMHAFVGKRTPAHASALGKVLLAHVPDAD
                     LDALVSRGLPRFTPHTITEPAALREALHQIRANGWALDDEEMEVGLRCLGAPITDHSG
                     RPCACVAVSAPVARMDPHRIASLTPLLKSTAARISRMLGSPSGAIRAA"
     gene            1805..>2000
                     /locus_tag="VHX39_20385"
     CDS             1805..>2000
                     /locus_tag="VHX39_20385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993535.1"
                     /translation="MFTRNGATIRNIVEVMWETPPAHYDAHSKMLVTPETAATKLLDH
                     RISSYQPKGFVAPHKHKVQEQ"
BASE COUNT          349 a          631 c          679 g          341 t
ORIGIN      
        1 actggtcgca cgatcgtcga aggtgaaccc cagcgccagg atgacatcgg cgttcctggt
       61 cgccacgttg gccgcatagg tgccgttccg cccgatcgag ccgaacgcca gccggtgccg
      121 ctcactgatc gaacccttgc cgttcgggct ggtcaccacg ggaatggacg tcagttcggc
      181 gaattcctgc aacgccggca ccgcttccgc cagcagcaca ccctggccag cgatgatgac
      241 cggccgttcg gccgccagca gaaccttcag ggcggcggtc agcgcctcgg gattgcccgg
      301 tgcggcgttg acgatgcggg ccgatgcctg tggcggggtc acctccgcct cctcgacgaa
      361 gacgttcagc ggcacgtcca ggttcaccgg accaggccgg ccggacagca tcagttccca
      421 cccctggcgc accgccagcg gcatcatgtc cacccgcgtc ggctggtagc tgcgcttcac
      481 atatggacgg atcaccgacg gaaaatcgcc ctggtagtag cgtccggttt cctggaacgg
      541 gttgcggttg aactggctgg tcggcacgtt gccggtgatg gcgaagaacg ccgaactgtc
      601 catcatcgcc gccgccagcg ccatcaccag gttggcggag ccggggccgc acgacgtgaa
      661 ggtcgccacc ggttcgtgcc gcaccttgaa ataggcatcg gccatgtgac cggcagtctg
      721 ctcatgatgc accgagatgg tgcggatgcg gtcctgcgcc ttgaacgccg catccaggaa
      781 cccgacgttg ccgtgcccac acaggccgaa caggtacggc actttctggc gcgtcagaaa
      841 atccacgatg atatcgccac cgttcatgat ggcgcgttcg ctctggttca tgcgggtctc
      901 cgtttcaggc ggctcgtatc gcgccggacg ggctgcccag catgcgggaa atccgggcgg
      961 cggtggattt gaggaggggg gtgaggctgg cgatgcggtg ggggtccatc cgtgcgaccg
     1021 gcgccgacac cgcgacgcag gcacagggcc gcccgctgtg gtcggtgatg ggcgcgccga
     1081 ggcagcgcag cccgacctcc atctcctcat cgtcgagtgc ccagccgttg gcgcggatct
     1141 ggtgcagggc ttctcgcagg gcggcgggtt cggtgatggt gtgcggggtg aaacgcggca
     1201 ggccacggct gaccagggca tcgaggtcgg cgtccggcac gtgtgccagc agcactttcc
     1261 ctaaagcgga ggcgtgagcc ggggtccgct tgccgacgaa ggcgtgcatg cggatcagcc
     1321 gcgtgccgtc caccgcctgc acgcagatcg cctctccgtc atacaggatg ccgacatgga
     1381 cggtttcgcc ggtttcgcgc gccaggtcct gcagcggcgg cagtgcctgc cagcgcagtt
     1441 gctcatgccg gacggccgac gaacccaggg tgtggaaccg catcgccagg gaatagcggc
     1501 cggtgacgtg gtctttctgg aggtacccga agtcctcgat cgtgtgcagg atgcggaaca
     1561 cggtcggttt gctctggccc agttcggtag ccagttcggc aagactccag gtctcctgac
     1621 gggcgaagca gtcgagaagt tcgagcccct tggtcagcga gccgaggcgg taagggtcgc
     1681 gcggcggttc atcggcgttt cgcattgcga aattggagcc ttgttttcgt aacgctgaac
     1741 cgtataacga aattgaatcc gcaggcaatc ccccctgcga tcgggacgaa ggcaggacgg
     1801 tcagatgttc accaggaatg gcgccacgat ccgcaacatc gtcgaggtga tgtgggagac
     1861 gccgccggca cactacgacg cgcactcaaa gatgctggtg acgccggaaa cggcggccac
     1921 gaagctgctc gatcaccgga tttcctcgta ccagccgaag ggcttcgtgg caccgcataa
     1981 gcacaaggtg caggagcaga
//
LOCUS       DATAVD010001068         1676 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1592927, whole genome shotgun sequence.
ACCESSION   DATAVD010001068 DATAVD010000000
VERSION     DATAVD010001068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1676
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1592927"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..650
                     /locus_tag="VHX39_20390"
     CDS             <1..650
                     /locus_tag="VHX39_20390"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEX3993536.1"
                     /translation="WHDCPIVAALSARFDRDVFLENDADAAALGECFAGSARGARRVV
                     MLTFGTGVGGGVVIDDQIYRGAQGEHPELGHIPVAPAVSTECYCGTKGCLESIASGTA
                     IAEAGRQHGLSGSEAVFSAAAAGNPAAMEILHHVRLSLGTATWTILHTFMPEVLVLGG
                     GIMDSHYANLAPAVEQPLGHATMVPRHAFRVVKAQLGNDAGIVGAASLALRARGS"
     gene            complement(673..>1676)
                     /locus_tag="VHX39_20395"
     CDS             complement(673..>1676)
                     /locus_tag="VHX39_20395"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEX3993537.1"
                     /translation="ANLLVDKQGVVKILDMGLARFTDESQGSLTREYDQKMIGTVDYL
                     APEQAIDSHKVDLRVDIYSLGCTLYFMLTGDAPFPQGTIPQRLMQHQSADPTDVRKLR
                     PDAPGALIAICKKMMAKSADDRYQSGDAVAEALSDWLGDRESADSASGNGSTVGGVSL
                     NENLSLAPLDDEPARRTVSSSRPDDTAPGSASKTSVSRKTDAGSKSGVASNSGAGAKS
                     GIKPSGTVASGKGESSSVTGQDIRGEKSNPQKPRSGASAPRRKSDDLMDDLLAPPPAG
                     HTSGPMAKMPSSAGRNPHHPGSTMPMWLTVALAVVCAFVVGGLLLGLLLSWDSFSRY"
BASE COUNT          290 a          506 c          541 g          339 t
ORIGIN      
        1 gttggcacga ttgcccaatt gtggccgcgc tttcggccag gttcgatcgc gacgtgtttc
       61 tggagaacga tgcggatgcc gccgcactcg gcgagtgctt cgcgggttcg gcccgcggcg
      121 ctcggcgcgt cgtcatgctg accttcggaa ccggggtggg cggcggcgtg gtcatcgacg
      181 atcaaatcta ccgcggggcg cagggcgagc atccggagct ggggcacatt cccgtcgcac
      241 cggcagtgtc gacggagtgt tattgcggca cgaagggttg cctggagtcg atcgcctcgg
      301 gaacggcaat cgccgaggcc ggacgacagc acgggctatc cggcagcgaa gccgtgtttt
      361 ccgccgccgc ggcagggaat cccgccgcga tggaaatcct gcatcatgtt cgtttaagtt
      421 tgggcaccgc cacctggacc atcctgcata cgttcatgcc ggaggtgctg gtgctggggg
      481 gaggaatcat ggactcgcat tacgccaatc tggcaccggc cgtcgaacag ccgttgggac
      541 atgccacgat ggtgccgcgc catgcctttc gcgtcgtcaa agcacagtta ggcaacgatg
      601 ccggaattgt aggagcggcc agtttggcgc tgcgcgctcg cggttcgtga gcgcccgttg
      661 ccgcggggga cgtcagtagc ggctgaaact gtcccaggaa agcagcaacc ccagtaatag
      721 tcctcccacc acgaaagcgc agacgaccgc cagggcgacg gtcaaccaca tgggcatcgt
      781 cgatcctgga tgatgcggat tgcgcccggc ggaagagggc atcttcgcca tgggccccga
      841 agtatgtccg gccggcggcg gtgccaacaa atcgtccatc aggtcgtccg acttgcgtcg
      901 gggcgcggaa gcaccggaac gaggtttttg cgggttggat ttttcgccgc ggatatcctg
      961 tccagtgacg gacgatgatt ctcccttgcc gctcgcgacc gttccggaag gcttgatgcc
     1021 cgatttggct ccggcaccag agttggacgc aactccagat tttgagcccg cgtccgtttt
     1081 tcgcgagacg cttgttttcg acgcgctgcc gggggcggtg tcatctggcc tcgacgacga
     1141 gacggttcgc cgagccggct cgtcatccag cggcgccaag gacaggtttt cattaagtga
     1201 gaccccgcca accgtgcttc cattgccact ggctgaatcg gccgactcgc ggtcgccgag
     1261 ccaatccgat agcgcctcgg ccaccgcgtc gccgctttgg taacggtcat ccgccgactt
     1321 ggccatcatt tttttgcaga tggcaatcag cgctcctggc gcatcggggc gcaatttgcg
     1381 gacgtcggtc ggatcggctg actggtgctg catcaagcgt tgcggaatcg ttccttgcgg
     1441 aaacggcgca tcgcccgtca gcatgaaata cagcgtgcaa cccaggctat agatgtcgac
     1501 ccgcaggtca accttgtggc tatcgatcgc ttgttcaggc gccaggtaat cgaccgtgcc
     1561 gatcattttc tggtcgtatt ccctggttag cgaaccctgg ctttcatcgg tgaagcgggc
     1621 cagacccatg tccaggattt tgacgacgcc ctgtttgtcg accagcagat tggcag
//
LOCUS       DATAVD010001069         6863 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_661870, whole genome shotgun sequence.
ACCESSION   DATAVD010001069 DATAVD010000000
VERSION     DATAVD010001069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6863
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_661870"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..495
                     /locus_tag="VHX39_20400"
     CDS             <1..495
                     /locus_tag="VHX39_20400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993538.1"
                     /translation="FSPTNLYRWKLQNGTANDANYFRNSSKDDHLAPGPEFLLEIRNV
                     LDEIVDLFPETVIYNRAYNHWVTNPAGLYDIDPKTGWATDCEIRRTGHHRHFRTDLTD
                     SESKCCSPNLDCHDCRAYAMASGTAVSRFRRFLSSYEAFCDWVSIAEQWSRLFMHDWD
                     RLGA"
     gene            complement(668..1396)
                     /locus_tag="VHX39_20405"
     CDS             complement(668..1396)
                     /locus_tag="VHX39_20405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3993539.1"
                     /translation="MSAEIKAQLAPHGVLRAAINMSNFLLVTGRAANGDPEGVSPSMA
                     RAIADRLGVPVKYVPFAKPGELADEAENDVWDIGNIGAEPARAQKIAFTAAYAEIEAT
                     YLVPPGSALRSIADVDKPGVRIAVSARSAYDLWLEANIKHATLIRSSSLDGSFSDFAA
                     NKYEALAGLRPRLLTDVKQMPGAKILDGQFTAVQQAVGTPRSKGAAVATWLHAFVEEA
                     KASGLVGKFIDQHKVVGLSVAPPG"
     gene            complement(1485..2153)
                     /locus_tag="VHX39_20410"
     CDS             complement(1485..2153)
                     /locus_tag="VHX39_20410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HEX3993540.1"
                     /translation="MNVLTPPKARLYIEIVHDLVCPWCYLGVRRLLRTLRRRPDLAFD
                     LVWRPFLLNPDMPRLGMTRPEYVVRKFGGEDRAQRLYATISETGRNEGLEFRFDRIRR
                     TPSSIDAHRLVRHAAGYGRADSLVEALFAAHFTDGLDIGNHGVLISVATACGMDPLAV
                     RRFLASDAETEGVHADNLRAHRLGINGVPCFVVDGMHAIAGAQEPEVIERLLDIATVD
                     AIHF"
     gene            complement(2209..3237)
                     /locus_tag="VHX39_20415"
     CDS             complement(2209..3237)
                     /locus_tag="VHX39_20415"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX3993541.1"
                     /translation="MRFRQEIQALPRQACLRAISAEALTAPILVLGAPRSGTTWLAKI
                     IDSHPDVLYRHEPDETIPAPSPLTPDALPALLARWATETGARTVTKQPYFRKSWQPGW
                     ALGVRTGLAAAVGAASRMPPPFKVLGGLRIPDLAARPAPRIAIKSVRWAEGAATVARS
                     LPDSRTIFILRHPCGQVASVMRGNRQRRFDLTTGGTDMPFDEVGTLRFAASFGLTEPD
                     FQALPDAAKYAWSWRFLNEPAYAALAAQSNVQVVLYEALCSDPSSLVRRILKFANLDW
                     DRQTEAFVARSTSHQGKAGYHAIFRNAVAAAEAWRGTMAPADQDAVRSVASASPLARF
                     WPDLMDAR"
     gene            complement(3189..5915)
                     /gene="secA"
                     /locus_tag="VHX39_20420"
     CDS             complement(3189..5915)
                     /gene="secA"
                     /locus_tag="VHX39_20420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003622096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEX3993542.1"
                     /translation="MLASIARAIFGSSNDRSLKGYQRRVPAINALEDGMKALSDEALA
                     AKTVEFRARLADGATLDELLPEAFAAVREASRRVLGQRHFDVQMVGGMVLHDGKISEM
                     KTGEGKTLVATLPVYLNALAGNGVHVVTVNDYLARRDADWMGQIYNFLGLTYGVVVHG
                     QDEDTKRVQYAADITYGTNNEFGFDYLRDNMKYRLEDMVQRDFFYAIVDEVDSILIDE
                     ARTPLIISGPAEDSSDLYRTVDLVVKELVKDPSTYDKDEKFKTVSLTEPGSETVEDML
                     KEAGVLTEGNLYDIFNVSVIHHVQQSVRAHTLFARDVDYIVRDDQVIIIDEFTGRMMQ
                     GRRYSEGLHQALEAKEHVTVQAENQTLASITFQNYFRLYPKLSGMTGTAMTEADEFAE
                     IYKLDVVEIPTNVPVTRKDEDDEVYRTAAEKYEAVALLIADARAKGQPVLVGTTSIEK
                     SETISDLLKKKKVPHSVLNARFHEQEAEIVSQAGAPGAVVIATNMAGRGTDIKLGGNL
                     DVRLKKELSGIHDEAELAAREAKVREDVAVAHQKVKDAGGLFVIGTERHESRRIDNQL
                     RGRSGRQGDPGRSHFFLSLEDDLMRIFGSDRMGGMLQRLGLKDGEAIVHPWINKALEK
                     AQKKVEARNFDTRKNVLKYDDVMNDQRKEVYAQRKEFMKLVDVADTVAEMREDVLSLL
                     VSSRIPEKGFSENWQLADLAADVSRVFNMTLPIEEWGQEEGVDETHLRERIGRAVDEM
                     MAAKAANMGPDLMRFIEKSLLIQTLDAVWKEHLYALDHLRQGIGLRAYGQRDPLNEYK
                     SEAFALFTAMLVELKERVTSLLARVELAPERSMAPPPMMRMMETHAEPESALMSELAL
                     AEPAPPPRMTMAPTRTPEVDPNDETTWAATPRNAQCPCGSGKKYKHCHGRLA"
     gene            complement(6037..6243)
                     /locus_tag="VHX39_20425"
     CDS             complement(6037..6243)
                     /locus_tag="VHX39_20425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993543.1"
                     /translation="MAIRTSIRRLRQHPCLHPVCDHPGVRELPCQGGFRALYRVHPDT
                     GHDDTAGDVRILRMFGPGQDRAAP"
     gene            complement(6384..6707)
                     /locus_tag="VHX39_20430"
     CDS             complement(6384..6707)
                     /locus_tag="VHX39_20430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993544.1"
                     /translation="MIWCRGKPAPAAPRYPERRPKSGLVTLATAREQDYIGHMGTVNL
                     ETDNAPHPESETDRQRRLSREARMVAEADADIAADRLVDEADVDAWIDSIGTGHELPV
                     PYAGS"
BASE COUNT         1180 a         2263 c         2155 g         1265 t
ORIGIN      
        1 ttcagcccga caaatctcta tcgttggaaa ctgcagaacg gaacggccaa cgatgcgaat
       61 tattttcgaa acagttcgaa ggacgaccat ctcgcccctg gtccggaatt tctgttagaa
      121 atacgaaacg tgctcgatga aatcgtcgac ctgttccccg aaacggtgat ctacaaccga
      181 gcatacaatc attgggtgac caatcccgcc ggtctttacg atatcgaccc gaagaccggt
      241 tgggcaacag actgcgaaat tcgccgaacc ggtcatcaca gacatttccg taccgatctc
      301 accgacagtg agagcaagtg ctgtagcccc aacctggatt gtcacgactg tcgcgcttac
      361 gcgatggcat ccggtaccgc ggtcagtcgt ttccgccggt tcttgtccag ctatgaggcc
      421 ttctgcgatt gggtaagcat cgcagagcaa tggtcgcgct tgttcatgca cgactgggac
      481 cgcttggggg cctgaaaacg ggcgtgccta cgaaggcatc aaccgacgtt gtcgttgacc
      541 cgtcggttgg ccttatccgt cacgctgacg caggccggct caagcccacc accggaccaa
      601 agcccaacac cgccacaccc agccctcacg gccaggccat ggcccccgcc atgtgagtga
      661 ccccgcctca gccgggaggc gccaccgaca gtccgacaac cttgtgctgg tcgatgaact
      721 tccccaccag ccccgacgcc ttcgcttcct ccacgaacgc gtgcagccac gtcgccaccg
      781 ccgcaccctt gctccgcggc gtgccaaccg cctgctgcac ggcggtgaac tgcccgtcca
      841 ggatcttcgc gcccggcatc tgcttcacat cggtcagcag ccgcggccgc aatcccgcca
      901 gcgcctcata tttattcgcg gcgaaatccg agaacgaccc atccaggctg ctcgaccgga
      961 tcagcgtcgc gtgcttgatg ttcgcttcca gccacaaatc gtacgcactg cgcgccgaca
     1021 ccgcgatccg cacccccggc ttgtccacat cggcgatgga tcgcagcgcc gaaccgggcg
     1081 gcaccagata ggtcgcctcg atctcggcat acgcggcggt aaaggcgatc ttctgcgccc
     1141 gagcgggttc ggcgccgata ttgccgatgt cccacacgtc gttctcggcc tcatcggcca
     1201 gttcgccggg tttggcgaag gggacatact tcaccggcac acccagacga tcggcgatcg
     1261 cacgcgccat gctgggcgac acaccctcgg ggtcgccgtt ggcggcacgc ccggtcacca
     1321 gcaggaagtt ggacatgttg atggcggcgc gcaatacccc gtgcggtgcg agctgggcct
     1381 tgatttctgc ggacataagg acggttccgt tcctggtttc gatccgcagt ctaggccccg
     1441 gaccgctatc gcggcaaccc gagcgcctgg caaaacgata catgttagaa atgaatggcg
     1501 tccactgtgg cgatatccag cagccgttcg atcacctcgg gttcctgcgc cccggcgatt
     1561 gcgtgcatcc cgtcgacgac gaagcagggc acgccgttga tccccagccg atgggcccgc
     1621 aagttgtcgg catggacgcc ttccgtctcg gcatccgagg ccaggaagcg ccgcaccgcc
     1681 agcgggtcca tcccgcaggc cgtggcgacc gagatcagga caccatgatt gccgatatcc
     1741 aggccgtcgg tgaagtgcgc cgcaaacagt gcctccacca ggctgtccgc tcggccgtac
     1801 cctgccgcgt ggcgtaccag ccgatgtgca tcgatcgacg acggcgtgcg gcggatgcgg
     1861 tcgaagcgga attccagccc ctcgttgcgc ccggtctcgc tgatcgtcgc atacaggcgc
     1921 tgcgcccggt cctcgccacc gaacttgcgt accacgtatt cgggacgtgt catgcccagt
     1981 cgaggcatgt cgggattcag caggaaaggc cgccacacca gatcgaacgc cagatcgggg
     2041 cggcgtcgca atgtccgcag caggcggcgg acccccaggt agcaccacgg acagacgaga
     2101 tcatgcacga tctcgatata aagccgagcc ttcgggggcg tcaggacgtt cacagtggaa
     2161 gtgtgacgct ttcagacgcg attgtcacgc aactatcaga tcggatcgct atcgtgcgtc
     2221 catcaggtca ggccagaatc gggccagcgg cgatgccgag gccaccgaac gaacggcgtc
     2281 ctggtcggcc ggcgccatgg tgccgcgcca ggcctccgcg gccgcgaccg cattgcggaa
     2341 gatcgcgtgg taacccgcct tgccctggtg cgaggtactt cgggcgacaa atgcctcggt
     2401 ctggcggtcc cagtccaggt tggcgaactt caggatccgc cgaaccagcg acgatgggtc
     2461 ggaacagagc gcctcataca ggacgacctg gacgttggat tgcgccgcca gcgccgcgta
     2521 ggcaggctcg ttcaggaacc gccagctcca ggcgtatttt gctgcgtcgg gcagcgcttg
     2581 aaaatccggt tcggtgaggc cgaacgaggc tgcaaaccgg agcgtgccca cctcatcgaa
     2641 cggcatgtcg gtgccaccgg tcgtcaggtc aaatcgccgc tggcgattgc cccgcatcac
     2701 cgatgccacc tgcccgcaag gatggcgcag gatgaagatc gtgcggctgt ccggcagcga
     2761 ccgggccacg gtcgcggcgc cttccgccca gcggaccgac ttgatggcga tgcgcggggc
     2821 cggccgcgcc gccagatctg ggatgcgcag accgcccaga accttgaacg gcggcggcat
     2881 gcgggatgcg gcaccgacag ctgccgccaa ccctgttcgc acgcccagcg cccatcccgg
     2941 ctgccaggat ttccggaaat acggctgctt ggtaacggtg cgggcgccgg tttcggtcgc
     3001 ccagcgggcc agcaacgccg gcagggcgtc cggcgtcagc ggcgacgggg ccgggatcgt
     3061 ctcatccggt tcgtgccggt aaagcacgtc cgggtggcta tcgatgatct tcgccaacca
     3121 ggtggtgccg gagcgtggcg cgcccagcac caggatcggc gctgtcaggg cctcggcgct
     3181 gatcgctctc aggcaagcct gccgtggcag tgcttgtatt tcttgccgga accgcacgga
     3241 cactgcgcgt tgcgcggcgt cgccgcccag gtggtctcat cgttcggatc gacttcgggc
     3301 gtgcgggtcg gcgccatggt catccgcggc ggcggtgccg gttcagccag cgccagttcc
     3361 gacatcagcg ccgattccgg ttcggcgtgg gtctccatca tccgcatcat cggcggcggc
     3421 gccatcgacc gttcgggcgc cagctcgaca cgggccagca ggctggtcac ccgctccttc
     3481 aactcgacca gcatggcggt gaacagggcg aaggcctcgg acttgtactc gttcagcgga
     3541 tcgcgctggc catacgcgcg caggccgatg ccctggcgca aatggtccag cgcataaaga
     3601 tgctctttcc acaccgcatc gagggtctgg atcagcaggc tcttctcgat gaaccgcatc
     3661 aggtcggggc ccatgttggc cgccttcgcc gccatcattt cgtccaccgc ccggccgata
     3721 cgctcccgca gatgggtctc atcgacgcct tcttcctggc cccattcctc gatcggcagg
     3781 gtcatgttga agacccggct gacatcggcg gcgagatcgg cgagctgcca attttccgag
     3841 aacccctttt ccggaatgcg ggaggagacc aacagcgaca gcacgtcctc acgcatctcg
     3901 gccacggtgt cggccacgtc cacaagcttc atgaactcct tgcgctgggc atagacctcc
     3961 ttgcgctggt cgttcatgac gtcgtcgtat ttcagcacgt tcttgcgcgt atcgaagttg
     4021 cgcgcctcga cctttttctg cgccttttcc agggccttgt tgatccaggg atggacgatc
     4081 gcctcaccgt ccttcagtcc caggcgctgc agcatcccgc ccatccggtc ggagccgaag
     4141 atgcgcatca ggtcgtcttc cagcgacagg aagaaatgcg agcgccccgg atcgccctgc
     4201 cggccggacc ggccacgcaa ctggttgtcg atgcggcggc tttcatggcg ttcggtgccg
     4261 atgacgaaca ggccgccggc gtccttcact ttctggtggg cgaccgccac gtcctcacgc
     4321 accttggcct cgcgcgcagc cagttcggct tcgtcgtgga tgccggacag ctccttcttc
     4381 aaccgcacat ccaggttgcc gccgagtttg atgtcggtgc cgcggccggc catgttggtg
     4441 gcgatcacca ccgcgccggg cgcgccggcc tgcgacacga tctcggcctc ctgctcgtgg
     4501 aaccgcgcgt tcagcaccga gtgcggcact ttcttcttct tcagcaggtc gctgatcgtc
     4561 tcgctctttt cgatcgaggt ggtacccaca agcaccggct ggcccttcgc gcgcgcgtcg
     4621 gcgatcagca gggcgacggc ttcgtatttc tccgccgcgg tgcggtagac ttcgtcgtcc
     4681 tcgtccttgc gggtaaccgg gacgttggtg gggatctcga ccacgtccag cttgtagatt
     4741 tcggcgaatt catccgcctc ggtcatcgcc gtgccggtca tgccggacag tttgggatac
     4801 agccggaagt aattctggaa ggtgatcgac gccagggtct ggttttccgc ctggacggta
     4861 acgtgctcct tcgcctccag cgcctggtgc aggccttccg agtagcgccg tccctgcatc
     4921 atgcggccgg tgaattcgtc gatgatgatg acctggtcgt cgcgcacgat gtaatcgacg
     4981 tcgcgggcga acagcgtatg cgcccgcacc gactgctgga cgtggtggat gaccgagacg
     5041 ttgaagatgt cgtacaggtt gccctcggtc agcaccccgg cttccttcag catatcctcc
     5101 accgtctcgc tgcccggttc ggtcaacgaa acagtcttga acttttcatc cttgtcgtag
     5161 gtcgacgggt ccttcaccag ctccttcacc accaggtcga cggtgcggta caggtccgaa
     5221 ctgtcctcgg ccgggccgga gatgatcagc ggcgtgcgcg cttcgtcgat caggatcgag
     5281 tcgacctcat cgacaatggc gtagaagaag tcgcgctgga ccatgtcttc cagccggtac
     5341 ttcatgttgt cgcgcagata gtcgaagccg aattcgttgt tggtgccgta ggtgatgtcg
     5401 gcggcatatt gcacgcgctt ggtgtcttca tcctgcccgt ggacgacgac gccgtaggtc
     5461 aggccgagga agttgtagat ctgccccatc cagtcggcgt cacggcgggc gaggtagtcg
     5521 ttcacggtga cgacgtgaac accattgccg gcgagcgcgt tcaggtagac gggcagggtg
     5581 gcgaccaggg tcttgccctc gccggtcttc atttcggaga tcttgccgtc gtgcagcacc
     5641 atcccgccaa ccatctgcac gtcgaagtga cgttgcccga gaacccggcg gctggcttcc
     5701 cggaccgcgg cgaacgcttc cggcagcaac tcgtccagcg tcgccccatc ggccaggcgc
     5761 gctcggaatt ccaccgtctt ggcggccagc gcctcatccg acagcgcctt catgccgtcc
     5821 tccagcgcgt tgatcgccgg aacacgccgc tggtaccctt tcagggagcg gtcgttcgag
     5881 gagccgaaaa tagcgcgggc gatagaggcg agcatgcgga ccttccaaga gcgaacggtc
     5941 cgggaagacc cagacgcgcc gcgttcagat aggaccccga tgcctcaggg tcaacgagaa
     6001 cgcgagtctg tgttggttcc ggacaggatg gcgggatcag ggtgcagcgc gatcctgccc
     6061 gggaccgaac atccgcaata ttcgcacgtc gccggcggtg tcgtcatggc cggtgtcggg
     6121 atgcacccga tacagcgccc ggaatccgcc ctgacaaggc agttcccgca cgccaggatg
     6181 gtcgcaaacc ggatgcaggc aagggtgctg tcgcagacgc cggatcgagg ttcggatcgc
     6241 catcaatctg cgccgagctg tcggccctgc gcccgctggg tcagccagcc actgatcctg
     6301 ttgagaccgg caagcgcctg attggtatag agcagccgtc gtggcgggga gtcgccgcca
     6361 ggagggctca tcggatcgtt cgatcagctt ccggcgtagg ggacgggcaa ttcgtggccg
     6421 gtgccgatgc tgtcgatcca ggcatcgacg tccgcctcat cgaccaaccg gtcggccgcg
     6481 atgtcggcgt ccgcctcggc gaccatccgg gcttcccggc tgaggcggcg ttgacggtcg
     6541 gtctcggact cgggatgcgg agcgttgtcg gtttcgaggt ttaccgtgcc catgtggcct
     6601 atgtagtcct gctcacgggc agttgccagc gtgacgagac cgcttttcgg gcgacgttca
     6661 gggtagcggg gcgctgcggg tgccggcttc ccacggcacc agatcacgcc ggggtcccag
     6721 gcaatcgaag ttggcaacgg gtatcggcgc gggcgaacag gaagaagtcg gcgaacgatg
     6781 tctcatccgg acggccgggg tcgaacggat acgggttcgg gatatgcgcg cgcagccgcc
     6841 aggcgcggaa ctgcttagcc acg
//
LOCUS       DATAVD010001070         3025 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_105312, whole genome shotgun sequence.
ACCESSION   DATAVD010001070 DATAVD010000000
VERSION     DATAVD010001070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3025
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105312"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..512)
                     /locus_tag="VHX39_20435"
     CDS             complement(<1..512)
                     /locus_tag="VHX39_20435"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3993545.1"
                     /translation="MAITGVMDRDHVAEAYGRWAPVYDIVFGPVFRRGRLAAVKAAEA
                     IGGRVLEVGVGTGLSLADYGKGTRITGVDISEPMLDKARKRVELQSLARVEALEVMDA
                     EHLTIPDASFDVVVAQYVVTAIPNPEKALDEFVRVVRAGGEIILTTRIGAETGLRGML
                     EKWLMPFTTRL"
     gene            1128..>3025
                     /locus_tag="VHX39_20440"
     CDS             1128..>3025
                     /locus_tag="VHX39_20440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX3993546.1"
                     /translation="MSPRYRIGFDIGGTFTDFILLDTERTQIRLHKCLTTPADPSVGA
                     LEGLAEIVAGAGLQLSEIDEIVHGTTLITNALIERRGAKLGLITTAGFRDILEMGTEQ
                     RYDIYDLFLRYPDPLVPRRRRLEVAERMDRDGNTITPLDREAVWNAARSLAADGVEAI
                     AVCFLHAYRNPSHEREAGEIIRALLPDVAVSLSSDVVAELWEYQRLVTTCANAFVQPL
                     MDRYVRRLERELWQRGFRGALTLMHSAGGLVSPETARAFPIRLLESGPAGGGLATAFF
                     GRLAGQDDVISFDMGGTTAKACLIENGQAAIASEMEAARVHRFKKGSGLPIKAPVIDM
                     IEIGAGGGSIADIDEVGLLRVGPRSAGADPGPACYGRGGTEATVTDANLLLGYYDPGF
                     FLGGRMALDRDAAERALAAVGGRIGLSATEAAWGIHRVVTEGMAAAARIHIVEKGKDP
                     RAYAMVGFGGAGPAHAAGVARILGVREVLIPPASGAASALGFLAAPLSFEQVRSHPLR
                     LDEQGAAARIDAVLTELTAETRARLEASGVAPEDVVTERSADMRLFGQLHEISFALPA
                     GTIDDSAMPGIRAAFAAAYAARYTSVYEGVAVQLVSLRVRCRGPLPSLTIAQAETSAS
                     GPERKGVRA"
BASE COUNT          553 a          981 c          920 g          571 t
ORIGIN      
        1 agacgagtgg taaacggcat aagccatttc tccagcatgc cgcgcagtcc ggtctcggcg
       61 ccaatgcggg tggtcagaat tatctcgcca cccgcccgta caacgcgaac aaattcgtcc
      121 agcgcttttt ccgggtttgg aatagcagtg accacgtact gtgccacaac gacgtcgaac
      181 gacgcatcag ggatcgtcag atgctcggcg tccatcactt ccagagcttc cacacgcgcc
      241 aggctctgta actcaaccct tttgcgtgcc ttatccagca taggctccga gatatcgacg
      301 cctgtgatgc gtgtgccctt accgtaatcg gccaacgaca gccctgtccc aacgccaacc
      361 tcaaggacgc gcccgccgat ggcctcggcc gctttaacag cggcgagtcg tccgcgccgg
      421 aacaccggac caaaaacgat gtcgtagaca ggggcccaac gtccgtacgc ctcggcgacg
      481 tggtctcggt ccatcacgcc agttatcgcc atatggtttc tccggattcc tgggttgtca
      541 gtgggcaggg tcgtcgttgc gaaacggcgt ccggcaacgc aggcgcgggg cgcatttcac
      601 tgaccattaa ctgatcggtc gctgaggtcg ccgattccga tcgggcacca tatggccacg
      661 ataaaacggc aagtaatgcc gtaccattcg acgacctcgg acggacaaca cagcgagaca
      721 atcaggcgga tccggccggt gcggcgtcgg gtccgtattg ctttgttcga atccgtgaat
      781 caccgatcgt agccgctttc tggttgtcac aacccggcgg ttgctaaacc attcatcgca
      841 gcaagtcacc ggattcacga ccggaaacgc catcaattta attacaattt aaagtcgttc
      901 tcgttgcatt tacgtgacgc tcaagtaaac cgactccgca gctcatgcag ttgcggcaat
      961 aatcgaatgc cccggttcgg gcgtccgata ccgatccgac ggattgcgtc gcagtggaac
     1021 cgtctcgctc gcagaaaccc tgacagtccg gttgcaagag caatgggagg tcgccaaact
     1081 gctcggcttg ttgccagcca aagggtcagc gctggcgtgg aggctccatg tcccctcgtt
     1141 accgtattgg ctttgatatc ggcggaactt tcacggactt catcctgctc gataccgagc
     1201 gcacgcaaat ccgtctgcat aaatgtctca caacgcccgc cgacccgtcc gtcggcgcac
     1261 tcgaggggtt ggccgaaatt gtcgccggcg ccggtttgca actgtccgag atcgacgaaa
     1321 tcgtccacgg caccaccctc atcaccaacg cgctgatcga gcgccgaggc gccaaactcg
     1381 gcctcatcac cacagcgggc ttccgcgaca ttctggagat gggcaccgag caacgctacg
     1441 acatctacga cctgttcctg cgttatcccg atccgctggt accgcgccgt cgccggctcg
     1501 aagtcgccga gcgcatggac cgcgacggca acaccatcac gccgcttgac cgggaagccg
     1561 tgtggaacgc ggcgcgcagc ctcgccgcgg atggtgtcga agcaatcgca gtctgtttcc
     1621 ttcacgccta ccggaatccg tcacacgaac gggaggcagg ggagatcatt cgcgctctgc
     1681 tgcctgatgt cgcggtctca ttgtcgtctg atgtggtcgc cgagctgtgg gaatatcagc
     1741 ggctggtcac cacctgcgcc aacgccttcg tgcagccgct gatggaccgc tacgtgcgcc
     1801 ggctggagcg ggagttgtgg cagcgaggtt tccggggcgc cctgaccctc atgcattcgg
     1861 ccggcggact ggtatccccc gaaaccgcac gggcatttcc gatccggctg ttggagtcag
     1921 gcccagcggg gggcggtctg gcaacggcgt tttttggcag gctggcggga caggatgacg
     1981 tcatcagttt tgatatgggc ggcacgacgg caaaagcctg cctgatcgag aatggccagg
     2041 cggccatcgc ctccgagatg gaagccgccc gcgtgcaccg gttcaagaag ggctcaggcc
     2101 tgccaatcaa ggcgccggtc atcgacatga tcgaaatcgg tgccggcggt ggttcgatag
     2161 ccgatatcga tgaagttggc ctgttgcgtg tcggcccccg gtccgctggc gccgatccgg
     2221 gccccgcctg ctacggccgc ggcggcaccg aggcaacggt caccgacgcc aatctcctgc
     2281 tcggttatta cgaccccggc ttctttctgg gcgggcgtat ggcactcgac cgtgatgctg
     2341 ccgaacgcgc actggctgct gtgggaggcc gcattggcct gtctgcgacc gaagcagcct
     2401 ggggaatcca ccgggtggtc accgagggca tggccgccgc cgcgcggatc cacatcgtcg
     2461 agaaaggcaa agatccgcgc gcttatgcga tggttggctt cggcggcgcg ggcccggccc
     2521 atgccgccgg cgtcgcccgc atcctgggtg tccgggaagt cctgatcccc ccggcctccg
     2581 gcgccgcctc ggcattgggc tttctcgccg ccccgctcag cttcgagcag gtgcgcagcc
     2641 acccgctgcg gctcgacgag caaggcgccg cggcccgtat cgacgcagtg cttaccgaac
     2701 tcacggcaga gacgcgtgca cgcctcgaag cgtccggtgt tgcgcccgag gatgtggtga
     2761 ccgagcgatc cgctgatatg cgattgttcg ggcaactcca cgaaatcagc ttcgcgcttc
     2821 ccgctggcac catcgacgac agcgcgatgc caggcatcag agcggccttc gccgcagcgt
     2881 acgccgcccg ttacacctcg gtttatgaag gcgttgccgt gcaattggtc tcgctgcggg
     2941 tgcgctgccg aggcccattg ccgtcactga ccattgcgca ggcggagacc agcgcttcgg
     3001 gtcccgagcg taagggcgtt cgtgc
//
LOCUS       DATAVD010001071         6928 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2895021, whole genome shotgun sequence.
ACCESSION   DATAVD010001071 DATAVD010000000
VERSION     DATAVD010001071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6928
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2895021"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..339)
                     /locus_tag="VHX39_20445"
     CDS             complement(<1..339)
                     /locus_tag="VHX39_20445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993547.1"
                     /translation="MSTTFNVGDLIVHRVIESEGPLFDPLTFFPTLTQDVLNDNLSWL
                     RPVFIDPASGQLMLCIQSYVVRTQHHTILIDSCVGNHKERANYPFWHQMTSNRYERNL
                     AAADVRVNDID"
     gene            complement(408..1097)
                     /locus_tag="VHX39_20450"
     CDS             complement(408..1097)
                     /locus_tag="VHX39_20450"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEX3993548.1"
                     /translation="MTDIGLFDAMYSARALRQLKPDPVPEEMITRLLDAAIQGPSGGN
                     AQNWIFMVVRDAEQRRRLGAVYRKASDEVAEIYAARGRPAHLTDRQFQRMMAGGAYLW
                     EHMADAPVLLVPCLRQRDMPPREALPDAVAARYEAHLLHQEKIRGSSIYPAVQNIILA
                     CRALGLGTLITTNHILYEDEVRAILGLPDDVFTFAFMPIGFTIGKYGPLTRRPVSEVA
                     FADRWGANWPG"
     gene            1266..3308
                     /gene="tkt"
                     /locus_tag="VHX39_20455"
     CDS             1266..3308
                     /gene="tkt"
                     /locus_tag="VHX39_20455"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX3993549.1"
                     /translation="MAATIEASAPTSALALQAEILARPITENRRMADVIRALAIDAVE
                     AANSGHPGLPMGMADAATVLWTRFHKFDASAPNWPDRDRFVLSAGHGSMLLYSLLHLT
                     GYAGMSMEAIKQFRQLHSPAAGHPELGEAPGIETTTGPLGQGLATAVGMALAERILAA
                     RFGKSLVDHRTWVIASDGDLMEGVSHEALGLAGHLGLSKLTVLYDQNHISIDGDTALA
                     VSDDVVKRVAAHNWAVRQVDGHDPEQVAAALAFATRSRKPTMIVCRTIIGLGAPTKAG
                     TAGVHGSALGAKEAAAAKQALGWTAPPFTVPDELAAKWRAVGERSAGARKAWLNRLAA
                     SNQCAEFERAIEGKLPDNWADAVAAMKQEIADSKPKIATRQSGQKVLETLVPATPELI
                     GGSADLTGSNLTLVKGQGIIAPGDFSGRYIHYGVREHGMAAAANGMALHGGIIPYTGT
                     FFVFTDYMRPAIRLGALMKQRVIHVLTHDSIGLGEDGPTHQPVEHLASLRAMPNVHVY
                     RPGDTMETAECWELAVQRHDGPSLLVLTRQALPALRFDASKNLSARGGYVLAEAEGTR
                     QATLIATGSEVSLAMEARATLAAEGIQTAVVSLPCWDLFETQDAEYRAGVLGTGFRVG
                     IEAAGGFGWDRWLGPDGVFIGMPGFGASAPAGVLYKHFGITSEAAVAAVRKRLGKE"
     gene            3351..4364
                     /gene="gap"
                     /locus_tag="VHX39_20460"
     CDS             3351..4364
                     /gene="gap"
                     /locus_tag="VHX39_20460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014106371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEX3993550.1"
                     /translation="MPVKVAINGFGRIGRLVLRAIVESGREDVVPVAINDLGSVEANA
                     HLFAYDSVHGRFPGQIEVSGNTITIRHNGKVYGPLTVSAERDPTKVPYAGVDVALECT
                     GIFTSKAKASALIAAGARKVLISAPGDECDATVVYGVNHKVLTSAMTVVSNASCTTNC
                     LAPMAKVLHDRYGILRGYMVTIHAYTGDQNTVDTLHKDLHRARAAAVSAIPTSTGAAR
                     AVGLVLPELKGKLDGTAIRIPTPNVSLVSLDVNLAKPATKDEINAAMQDASKGELKGI
                     LDYNTHPLVSVDFNHCPASCTFDATQTAVVDGALARVMGWYDNEWGFSNRMSDTAALF
                     GSL"
     gene            4551..5738
                     /locus_tag="VHX39_20465"
     CDS             4551..5738
                     /locus_tag="VHX39_20465"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012226191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEX3993551.1"
                     /translation="MAFRTLDSLAAAGKRVLMRADLNVPVRDGKITDLTRIERLSPTI
                     RELSGAGAKVIVCSHFDRPKGKRVPSMSLRPMADALSHVLGRPVAFADDCIGPTAETA
                     VAAMANGDVLVLENTRYHPEEEKNDAAFSAALAKLADVFVNDAFSAAHRAHASTEGVA
                     HLLPAYAGRLMQAELEALDAALGNPKRPVAAIVGGAKVSTKLELLGNLVTKVNVLIIG
                     GAMANTFLAAQGKAVGKSLQEADMHDTARSILAQAATAGCDVMLPVDAVVATEFRANP
                     PTQTVSVDAVPADSMILDVGPSSVAALIARLPSLQTLVWNGPLGAFETPPFDVATVAL
                     ANAVAAATERGALRSVAGGGDTVSALRQAGVLEKLSYVSSAGGAFLEWLEGRTLPGVA
                     ALG"
     gene            complement(5788..6642)
                     /locus_tag="VHX39_20470"
     CDS             complement(5788..6642)
                     /locus_tag="VHX39_20470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993552.1"
                     /translation="MKHHLLVAAAIIALSGCSSDVQTTSGANYLAQYHNVPVTPSQEI
                     ITSAGRQRVKSIDQMVREAASVEPVLKFPARIGLARVDNGSLSNIPPAEAAAWQQTRD
                     RLGAKFGEFVPLNLLVTEMVTNSPTITASYNLQINNIVDKIRLGAARQHLDAVLIYEV
                     HSSESSGSNVLSAANISIIGGYILPSHYHDAQGYAEGLLIDVVQGYPYGTISATAGKE
                     SRVSSSWGWGSDYGNQVEFSNRVKSDAAIQLSQQAYDMFTKLATALAEKESLPKQMDT
                     RRHDRKYQ"
     gene            complement(6725..>6928)
                     /locus_tag="VHX39_20475"
     CDS             complement(6725..>6928)
                     /locus_tag="VHX39_20475"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3993553.1"
                     /translation="EDDGGGIPETQRVQVLGRGIRLDESKPGRGIGLAVAADIVALYR
                     GGIRLDTSALGGLAAFVSLPLQR"
BASE COUNT         1323 a         2106 c         2194 g         1305 t
ORIGIN      
        1 gtcgatgtcg ttcactctga cgtcggccgc agccaggttg cgctcgtaac gattggacgt
       61 catctgatgc cagaacggat aattcgcccg ttccttgtga ttgccaacgc aggaatcgat
      121 cagaatcgtg tggtgttgcg ttcgcaccac gtatgactga atgcacagca tcagctgccc
      181 gctcgccgga tcgatgaaca ccgggcgcaa ccaggacaga ttgtcgttca gcacatcctg
      241 ggtcagcgtt ggaaagaagg tgagcgggtc gaacaacggg ccctccgact cgatcacgcg
      301 atgcacgatc aggtcgccga cgttgaatgt ggtgctcatg cggaaccttc ctctggctgg
      361 accggcgcca tgatgccacg gttcaggcga cctgccgagg ccgaggctca ccccggccag
      421 ttggctcccc agcgatcggc gaaggcgacc tccgagactg gccggcgcgt caacgggccg
      481 tacttaccaa tggtaaaacc gatcggcatg aaagcaaagg taaacacgtc atccggcaga
      541 ccaaggatcg cgcgcacctc atcctcatac aggatgtgat tggtggtgat cagtgtgccg
      601 aggccaagtg cccggcaggc cagaatgatg ttctgcacgg caggatagat actcgacccg
      661 cgaattttct cctgatgcag aagatgcgct tcgtatcgtg cggcgaccgc atccggcagc
      721 gcctcgcgcg gcggcatatc gcgttgcctc aggcacggca ccagcagcac gggcgcgtcc
      781 gccatgtgtt cccagagata cgctcccccc gccatcatcc gctggaattg cctgtcggtc
      841 agatgcgccg gccggccacg tgcagcataa atttctgcaa cctcatccga ggccttgcga
      901 tacaccgccc ccaggcggcg gcgttgctcc gcatcccgaa ccaccataaa gatccagttc
      961 tgcgcgttgc ccccggatgg tccctggatg gcggcatcga gcagccgggt gatcatttcc
     1021 tcgggcaccg gatcaggctt caattggcgc aatgcgcgag cgctgtacat cgcgtcgaac
     1081 aatccgatgt cggtcatcgc atccgttcca ccatctgaag aagaccccgt tgcattacca
     1141 ggatgtacgg ccagagggaa ctccagccca gtaccaacct tatcgccagc gggctggaag
     1201 cggaggcgcg gcacttgccg gttcgcctca cctccgccta tagcggcaag gttgaaggag
     1261 acgtcatggc ggcaacaatc gaagcctcgg cacccaccag cgcgcttgcg ctgcaagccg
     1321 agatcctggc gcgtccgatc accgagaacc ggcgcatggc ggacgtcatc cgcgctttgg
     1381 cgattgacgc ggtggaagca gcgaactcgg gccatccggg cctgccgatg ggcatggcag
     1441 atgctgccac cgtattgtgg acgcggtttc acaaattcga tgccagcgca ccgaattggc
     1501 cggatcgcga ccgcttcgtg ctgtctgccg gtcacggctc gatgttgctg tattcgttgc
     1561 tgcatctcac cggttacgcc gggatgagca tggaagcgat caagcaattc cggcaattgc
     1621 actcgcccgc ggcgggccat cccgaacttg gtgaggctcc ggggatcgag accacgaccg
     1681 gtccgctcgg ccagggcctc gcaaccgcgg tcggcatggc gctcgcggaa cgaattctcg
     1741 ccgcgcggtt cggcaagtcg ctggtcgatc accgcacctg ggttatcgcc agcgacggcg
     1801 acctgatgga gggcgtcagt cacgaagccc tcggcctcgc cggtcatctg ggactgtcaa
     1861 aactcacggt tttgtacgac cagaaccata tttcgatcga tggcgatacc gcgctcgccg
     1921 tctccgatga cgtcgtgaag cgcgtggccg cccacaactg ggccgttcgt caggtcgacg
     1981 gacacgatcc cgagcaggtg gctgcagcgt tggcgttcgc cacgcggtcg cgcaaaccga
     2041 ccatgatcgt ttgccgcacc attattgggc ttggcgcgcc gaccaaggca ggcactgccg
     2101 gcgtgcatgg ttctgcgctt ggggcaaaag aggccgcagc ggcaaaacaa gcgcttggct
     2161 ggaccgcgcc accgttcacc gtgcccgacg aactcgcagc aaaatggcgt gcggttggcg
     2221 aacgttccgc cggagcacgg aaggcctggc taaaccggct cgctgcatcg aaccagtgtg
     2281 ccgagttcga gcgtgccatc gagggcaagc tccccgacaa ctgggctgac gcggtggccg
     2341 cgatgaaaca ggaaatcgcg gacagcaagc cgaagattgc cacccgccag tccggccaga
     2401 aggtgctgga aacgctggtg ccggcaacgc ccgaattgat cggaggttcg gccgatctga
     2461 ccgggtcgaa cctgaccctg gtgaagggac aaggcatcat cgcacctggc gatttctccg
     2521 gccgatatat tcattacggc gttcgcgaac acggcatggc cgccgccgcc aatggcatgg
     2581 cgctgcatgg cgggatcatt ccctataccg gcacgttctt cgtgttcacc gactatatgc
     2641 gtccggccat ccggttgggc gcgctgatga agcagcgggt gatccacgtc ctgacccacg
     2701 attccatcgg tctgggcgag gacgggccga cgcaccagcc ggtcgaacac ctggccagtc
     2761 tccgtgccat gccgaatgtg catgtctacc gcccaggaga cacaatggag acagcggaat
     2821 gctgggaact ggcggtgcag cgccatgacg ggccaagcct actggtgctg acccgtcagg
     2881 cgctgccggc gctgcgcttt gatgcttcga agaacctgag cgcgcgcggc ggctacgtcc
     2941 tggccgaggc tgagggtaca aggcaggcca cgctgattgc gaccggatcc gaggtttcac
     3001 tggcgatgga ggcgcgcgcg accttggctg ccgagggcat ccagaccgcc gtcgtgtcgc
     3061 tgccgtgctg ggatctgttc gaaactcagg acgccgaata tcgcgccggc gtacttggca
     3121 cggggttccg ggtcggcatc gaggccgccg gcgggtttgg ctgggaccgg tggcttggcc
     3181 cggatggcgt gttcatcggc atgcccggat ttggtgcgtc agctccggcc ggtgtgttat
     3241 acaaacattt cgggatcacc tcggaagccg ctgtggcggc ggtccgtaaa cgacttggta
     3301 aggaataact gcgaaatcgt cggggtaagt gacaggaaag gactaccaac atgccagtga
     3361 aggtcgcgat caacgggttc ggtcggattg ggcgcctcgt gctgcgcgcg attgtcgaaa
     3421 gcgggcgaga ggacgtcgtt ccggtcgcca tcaacgacct cggcagcgta gaagccaacg
     3481 cacatctgtt cgcttatgac agcgtgcatg ggcggttccc cggccagatc gaggtgtcgg
     3541 gcaacaccat caccatccgc cataacggca aggtctatgg ccccctcacc gtctcggccg
     3601 agcgcgatcc gaccaaggtg ccgtatgccg gtgtcgatgt tgcactggaa tgtaccggaa
     3661 tattcacatc gaaggccaaa gcctcggcgc tgatcgccgc gggcgcgcgc aaggtgctga
     3721 tctccgcacc aggcgatgag tgcgatgcaa ccgtggtcta tggcgtgaac cacaaggttc
     3781 tgacgtcggc gatgacggtg gtgtcgaacg cctcatgcac gacgaactgc ctcgcgccga
     3841 tggcgaaggt gttgcacgat cgttatggga ttttgcgcgg ttatatggtg acgatccacg
     3901 cttataccgg cgatcagaac accgtcgata cgttgcacaa ggatctgcat cgcgcccgcg
     3961 cggcggcggt gtcggcaatc ccgacctcga ccggtgcggc gcgggcggtg gggctggtat
     4021 tgccggaact gaagggcaag ctggacggca ctgcgatccg cattccgacg ccaaacgtgt
     4081 cgctggtgtc gctcgacgtg aacctggcga agcccgcgac gaaggacgaa atcaatgcgg
     4141 cgatgcagga tgcgtcgaag ggcgaactga agggcatcct cgactacaac acgcacccgt
     4201 tggtgtcggt tgacttcaac cattgcccag catcgtgcac attcgatgcg acgcaaaccg
     4261 cagtggtcga tggcgcactg gcgagggtga tgggctggta cgacaacgaa tggggcttct
     4321 ccaaccggat gtccgatacg gcagcgttgt tcgggagtct ctgagcagga tcagatatgc
     4381 ggacggcgac ctggcgccgc cgcccgcaat atccgctcga gaattccggg ccacacgtcg
     4441 tcatgctcct ccccggacgt gttccggggg ccgggctatc tggttcagca cgatcgctcg
     4501 caggttggcg atccggaatg atccgtaacc ctggcattcg gtgataaatc atggcctttc
     4561 gcacactcga ctcgctcgcc gctgccggca aacgcgtgct gatgcgggcc gacctgaacg
     4621 tcccggtccg cgacggcaaa atcaccgacc tgacccgaat cgagcgcctg tcgccaacca
     4681 tccgcgaact gtccggcgca ggggccaagg tcattgtctg tagccatttc gaccgtccga
     4741 agggcaaacg cgtgccgtcg atgtcgttac gccccatggc cgacgcactg agccacgtgc
     4801 tcggccgtcc agtggccttc gccgatgact gcatcggtcc gacggccgaa accgctgttg
     4861 ccgccatggc caatggcgac gtactggtgc tggaaaacac aaggtatcat cccgaggagg
     4921 agaagaacga cgctgccttt agcgccgctc tggcgaaact ggcggatgtc ttcgtcaacg
     4981 acgcgttcag cgctgcgcat cgcgcccacg ccagcaccga gggcgtggcg catttgttgc
     5041 ccgcctatgc cggccgcctc atgcaagccg aactcgaagc cctcgacgcc gcactgggca
     5101 atcccaaacg tccggtggcg gccatcgtcg gtggtgcaaa agtctcgacc aagctggagc
     5161 ttttgggcaa cctggtgacc aaggtaaacg tgctgatcat cggcggcgcc atggccaaca
     5221 ccttcctggc ggcgcaaggc aaagcggtcg gcaagtcgtt gcaggaagcc gacatgcacg
     5281 acacggcgcg ttcgatcctg gcgcaggctg caaccgcggg atgcgatgtt atgctgccgg
     5341 tggacgcagt ggtggccacc gaattccggg ccaacccacc gacgcagaca gtaagcgtgg
     5401 atgcggtgcc ggcggacagc atgatcctgg atgtcggccc gagctcagtc gccgcgctca
     5461 ttgcacggtt accgtcgttg caaacgctgg tctggaatgg tccccttggt gccttcgaga
     5521 cgccgccatt cgatgtggcg acagtggcgt tggcgaacgc cgtcgccgcg gcgaccgaac
     5581 gcggcgcgct acgcagtgtc gccggcggag gcgataccgt gtcggcgctg cgccaggcgg
     5641 gcgtgctcga gaaactgtcg tatgtgtcct cggctggcgg tgcgtttttg gaatggctgg
     5701 aagggaggac actgcccggc gtggcggcgc tggggtaacg ccgccttctt atgctgtcag
     5761 cgtgggagcc tctgtcagat cgacggacta ctggtatttt cgatcgtgcc ggcgggtgtc
     5821 catctgtttt ggtaacgatt ctttttccgc cagagccgtg gccagtttgg tgaacatgtc
     5881 gtacgcttgc tgcgacaatt ggatcgccgc gtcgcttttc actcggttcg aaaattcgac
     5941 ctggttcccg tagtccgatc cccagcccca ggacgaggag acccggcttt cttttccagc
     6001 cgtggcactg atcgtgccgt aggggtagcc ttgcacgaca tcgatcagca acccttccgc
     6061 atagccttgt gcatcgtgat agtgagatgg caagatataa ccaccaatga ttgaaatatt
     6121 ggccgccgag agaacgttac tcccactgct ttcgctgcta tgcacttcgt atatcagcac
     6181 cgcatcgaga tgctgccgcg cagcgccgag acggattttg tcgacaatat tgttgatctg
     6241 gaggttgtag ctcgcagtaa tggtcggact gtttgtcacc atctcggtaa cgagcagatt
     6301 gagtggaaca aattctccga attttgcgcc gagcctatcg cgggtttgct gccaggccgc
     6361 cgcctccgcc ggagggatat tggacagcga tccattatcc acacgtgcca ggccgatgcg
     6421 tgccggaaat ttcaataccg gctcgaccga agctgcttcc cggaccattt ggtcgatgct
     6481 cttgacgcgc tggcggccgg ccgatgtgat tatttcctgt gagggcgtga cgggcacatt
     6541 gtggtactgg gccagatagt tcgcgcctga tgtcgtctgc acgtcggatg aacagcccga
     6601 aagggcaatg atcgcggcgg cgaccagcag atgatgcttc atggatgctc cctatggttt
     6661 gcatgtggga gcgattttgc acaggtcaca tgaagcggcg cggaagagga aattccacgg
     6721 aaattcagcg ctggagcggc aggctgacaa aagcggcaag gccgcccaac gcggaagtgt
     6781 caagacgaat accgccgcgg taaagcgcga cgatatcggc cgcgacggcg aggccaatgc
     6841 cgcgtccggg tttgctttca tcgaggcgta tgcctcgccc gagtacctgg actcgctgcg
     6901 tttcaggaat gcctcctccg tcgtcttc
//
LOCUS       DATAVD010001072         3559 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1593503, whole genome shotgun sequence.
ACCESSION   DATAVD010001072 DATAVD010000000
VERSION     DATAVD010001072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3559
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1593503"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..262
                     /locus_tag="VHX39_20480"
     CDS             <1..262
                     /locus_tag="VHX39_20480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993554.1"
                     /translation="TRTGRQSPLSVYLEYRNSVLFVRENYPAWLAWTILIQFSRLVTK
                     ARAYPLGSSKAAFRGIIDGMRGRMGRPVEFLQYHNNSKGREN"
     gene            259..1128
                     /locus_tag="VHX39_20485"
     CDS             259..1128
                     /locus_tag="VHX39_20485"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX3993555.1"
                     /translation="MKRQLKIAISCLICVLSWPVSVLASVVGVAARPRLVILYYHDIP
                     AVSRARFARQMDKLMRRATVVAADWRGGPIKGRVCAITFDDAFVSVIDNALPELAKRQ
                     LPSTIFVPVGALGGPPGWAMEANCAPGEIVADEHLIRSLPSSLVTLGAHTMTHPVLSR
                     LPRATARAEIEQSRTLLSAMTGQDVRLMSFPYGDYDQEVVAMCETAGYDLVYGIVPTT
                     VDPQDSAFIRGRVAVNPDDSDLEFFLKMSGGYWWMSLASTLKQACLSPHTLLMHRKNP
                     WNRLPQAKAARSL"
     gene            1245..1901
                     /locus_tag="VHX39_20490"
     CDS             1245..1901
                     /locus_tag="VHX39_20490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993556.1"
                     /translation="MQASSEAAIRNFVRSQSATIVWMASGFSVELILAIMVLALFGTA
                     DRGTDGALQVTARFSFLLFLPAYCGGALTTLWGPSFEPIRKRGRDFGLTFAAAHLVHL
                     GLVAWLCWIGAAPPRATFVFFGIAAAWLYGLAALSIDRLHRAIGRVVFQWLNLVGLNF
                     IALAFADDFLQFPPQADAEYLLGYLPFVILSVAAPVLRVAASGLKVWRNRRNSRFPAH
                     "
     gene            1916..2965
                     /locus_tag="VHX39_20495"
     CDS             1916..2965
                     /locus_tag="VHX39_20495"
                     /inference="COORDINATES: protein motif:HMM:NF024627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HEX3993557.1"
                     /translation="MQRKRHSPVNPNGAWAAVVSMALLSGALRHAAAEPPHRFEDGSA
                     AAPAGDPLLPGILLHYAARPPWKVAGVDYAVGVPAGTHLLDPATIAIEGVAVDATNHT
                     IVVSGNNVTISGYEFGRSGGWGIHVDAKAANTVVKNCNFLVGDNHLVPINAGAGSGNL
                     TILDNTFNAANNSGAVWALVNYNGSGRFVAEYNTFENSPDDAIDFGAGTMTTVVEYNV
                     FENLGTDPQAHADAVQYVGVTSNNSVISFNTVYQANPSGNQGLQIEAQNGSTITNTLV
                     ENNVIVAKGGARTMSFSIFVGAASGPNTIDGAVVANNYIDFSGAYGPFYKPTGSHLTY
                     TGNVDMIGGRLLPGP"
     gene            3039..>3559
                     /locus_tag="VHX39_20500"
     CDS             3039..>3559
                     /locus_tag="VHX39_20500"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03619 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEX3993558.1"
                     /translation="MRYGIHLPHAGEQATPALLRRFAVQAEELGLDDVWVSEHIIVPR
                     DQFPRSPLFFDPVLSLTWVAAVTRRVRLGTSVLVLPMRHPLPLAKELATLHNLSEGRL
                     ILGAGVGWLKPEFAALGVPFEERGRRLDEGLAMMRAVWSNDPVTFKSRYIPSVIEGMT
                     MTPMPTSPIPLWLG"
BASE COUNT          638 a         1062 c         1079 g          780 t
ORIGIN      
        1 cacccgtacc gggcggcagt cgcctttgtc ggtttatctc gagtaccgca acagtgttct
       61 atttgtccgg gagaactacc cggcctggct ggcctggacc atcctgatac agttcagccg
      121 cctggtgacg aaggcccgtg cgtatccact cggcagctcc aaggcggcat tccgcggcat
      181 tatcgacggc atgcgtggcc gcatggggcg cccagttgaa tttctgcagt accacaataa
      241 cagcaagggc agggaaaatt gaagcggcaa cttaagatcg ccattagctg cctgatctgt
      301 gtactgagct ggccggtctc cgtgctggcc agtgtcgtcg gcgttgcggc gagaccacgg
      361 ctggttattc tgtattatca tgacataccg gcggtgagtc gagcgcgctt cgccaggcag
      421 atggacaagc tcatgcggcg cgccacggtg gtcgcggcgg actggcgcgg tggtcccatc
      481 aaaggcaggg tttgcgcgat caccttcgat gacgcgtttg tcagtgtcat cgacaatgcg
      541 cttcctgaac ttgcgaagcg ccaattgccc agtaccatct tcgttcccgt cggcgccctt
      601 ggcgggccgc ccggctgggc catggaagcg aactgtgcgc ccggcgaaat cgttgcagac
      661 gagcatctga tcaggtcgct gccctcttca ttggtgacgc ttggcgccca tacgatgacg
      721 catcctgttc tgtctcggct gccgcgcgcg acagctcgtg ctgaaatcga gcaatcgcgc
      781 acgttgttga gtgcgatgac cggccaggac gtgcgcctga tgtcgtttcc gtatggcgac
      841 tacgaccagg aagtcgtggc gatgtgcgaa accgcgggct acgatctggt ctatggcatc
      901 gtgccaacaa cagttgatcc gcaggatagc gcgttcattc gcgggcgggt cgcggtcaat
      961 cccgacgaca gcgacctgga attcttcctg aaaatgtccg gtggttactg gtggatgtcg
     1021 ctcgcttcca cgcttaagca agcctgcctg tcgccgcaca ccttgcttat gcaccggaag
     1081 aacccgtgga atcggcttcc gcaagccaaa gccgcgcggt cgctgtaaat ccggattccc
     1141 gcgcgtctga cgtttcgccc gtcattcgag gaatttttgg tcttcgatgt ctggcgcgac
     1201 ccttgccaca ataacttacg cccgaagccg agcactgcta ccatttgcaa gcatcgtcgg
     1261 aggccgccat tcgcaatttc gttcggtcgc aaagtgccac cattgtgtgg atggcgtcag
     1321 gcttctcggt tgaactgatt ttggccatca tggtactggc gctgtttggc actgcggacc
     1381 gaggcaccga tggcgccttg caagtgactg cgcgcttctc attcttgttg ttcttaccag
     1441 cgtactgcgg cggcgctttg acgaccctgt ggggtccgtc attcgaaccc atcagaaagc
     1501 ggggccgcga ctttggcctc acctttgctg ccgctcacct ggtccatctg ggcctggtgg
     1561 cctggctttg ctggatcggt gcggcgcccc ctcgcgccac attcgtgttc ttcggtatcg
     1621 cggcggcgtg gctctatggt ctggcagcgc tgtcgatcga tcgcctgcat cgagcgattg
     1681 gccgcgttgt ctttcaatgg ctgaacctgg tcggactgaa tttcattgcg ctggcgtttg
     1741 ctgatgattt tcttcagttt ccgccgcagg ccgatgccga atacctgctg ggatatctgc
     1801 cgttcgtcat actttcagtc gccgccccgg ttctgcgtgt tgcagcctcg ggactgaagg
     1861 tctggcggaa ccggcgtaat tcgaggtttc cggcgcattg atcgattctg ccaaaatgca
     1921 acgaaaacgc cactcgccgg tgaaccccaa cggcgcatgg gctgcggtcg tctcgatggc
     1981 gctgctatcg ggcgcactgc gtcatgcggc agccgagccg ccgcatcggt tcgaagatgg
     2041 gtctgccgcc gctccggcgg gcgacccgtt gttgccgggt attttgctgc actatgcggc
     2101 gcgaccaccg tggaaggtgg ccggggtcga ttatgccgtt ggggttcccg ccggcacaca
     2161 tctgctggat ccggcgacga ttgcgatcga aggggttgcg gtcgacgcga caaaccacac
     2221 aatcgtggtg tccggcaata atgtgacaat cagcggctat gaattcgggc gctccggcgg
     2281 atggggtatc catgtcgacg cgaaagccgc aaacaccgtt gtcaagaact gcaactttct
     2341 cgttggcgac aaccatctcg tgccgatcaa cgccggtgcg ggttcgggca atctgaccat
     2401 tctcgacaat acgttcaatg ctgcaaacaa ttccggcgct gtttgggctt tggtcaacta
     2461 caacggctcc ggccggttcg tcgcagaata taacaccttc gaaaactctc cggacgatgc
     2521 gatcgacttc ggtgcgggca cgatgacgac ggtggtcgaa tacaacgtct tcgaaaatct
     2581 gggaactgat ccgcaggcgc atgccgacgc agtgcagtat gtcggcgtga cctcgaacaa
     2641 ctccgtcatt tcgttcaata cggtttatca ggccaatccg agcggcaacc agggcctgca
     2701 gatcgaggcg cagaatgggt caacgatcac caacaccctg gtcgagaaca atgtgatcgt
     2761 ggcgaaaggt ggcgcccgca cgatgtcgtt ttcaatcttc gtcggcgcgg cctccggccc
     2821 caacacgatc gacggcgccg tggttgccaa caattacatc gatttcagtg gggcatatgg
     2881 tccgttttat aagccaaccg gcagtcatct gacctacacc ggcaatgtcg atatgatcgg
     2941 cggccggtta ctcccaggtc cgtagaccgc tctggccttg cggccatgaa agactacact
     3001 ccgccggttt tcgcaccgcc gcaactggag ggatccctat gcgctacggc attcatctgc
     3061 cccatgctgg cgaacaggca acgccggcgc tgctgcggcg cttcgccgta caggccgagg
     3121 aactgggtct cgacgacgtc tgggtgagcg agcacatcat tgtgccgcgc gaccagttcc
     3181 cccgctcgcc gttgttcttc gatccggtac tgtcgctgac ctgggttgcc gccgtcacaa
     3241 ggcgcgttcg attgggcacc agcgtgcttg tcctgccgat gcgccatccg ttgccgctcg
     3301 cgaaggaact ggcgacgctg cacaatcttt cggaggggcg gctgatattg ggcgccggcg
     3361 tcggctggct gaaaccggaa tttgccgcac tcggcgtgcc gttcgaggaa cgcggcagac
     3421 ggctcgatga agggctggcg atgatgcgcg cggtgtggag caacgatccg gtcacgttca
     3481 aaagccgata catcccgtcg gtaatcgagg gcatgaccat gacacccatg ccgaccagtc
     3541 cgattccgct gtggttggg
//
LOCUS       DATAVD010001073         4377 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3264517, whole genome shotgun sequence.
ACCESSION   DATAVD010001073 DATAVD010000000
VERSION     DATAVD010001073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4377
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3264517"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..306
                     /locus_tag="VHX39_20505"
     CDS             <1..306
                     /locus_tag="VHX39_20505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993559.1"
                     /translation="VDLEKIAAAELGLADTPGRPRQRSVSVEDNGMGDPLRFDAERLR
                     ILVERHLLFTGSERARALLDNWDTELAKFVKVVPRDYRRALLDLKAEQDAAKTVAAE"
     gene            495..1946
                     /locus_tag="VHX39_20510"
     CDS             495..1946
                     /locus_tag="VHX39_20510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HEX3993560.1"
                     /translation="MGKPTGFLEIERHDRAYEKPAERVKNFHEFTKPLPAAELTGQAA
                     RCMDCGIPFCHNGCPVNNMIPDWNNLVYRDQFRDALTVLHSTNNFPEFTGRICPAPCE
                     ASCTLNIDDSPVTIKTIECAIVDRGWAEGWILPEPPAVKTGRRVAVVGSGPAGLACAQ
                     QLARAGHAVTLYEKNDRIGGLLRYGIPDFKMEKHHIDRRMAQMAAEGVEFRTRVEVGV
                     SLSVDWLLEEYDAVALTGGAEWPRDLVLPNRGHDGIHFAMDFLTQQNKRDAGDDEATA
                     SGNEPISAKGKHVVVIGGGDTGSDCIGTSARQGAASITQIEIMPKPPEKENKALVWPD
                     WPNKLRSSHAHDEGVKRDWSVHTKDAVGVDGQVTALDCVYIEWVKGADGRMQMVEVPG
                     SEFQLKADLVLLAMGFLGPRRNALLEQAGVELDSRGNVAANTMQYLTSRERLFAAGDM
                     RRGQSLVVWAIREGRQCARAVDQFLMGKTSLPR"
     gene            2016..2753
                     /locus_tag="VHX39_20515"
     CDS             2016..2753
                     /locus_tag="VHX39_20515"
                     /inference="COORDINATES: protein motif:HMM:NF013788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C13 family peptidase"
                     /protein_id="HEX3993561.1"
                     /translation="MRLFLCFALAWLAMATATFAADAPAAMHYKAVLIAGDWSAAAFD
                     HATAAMQQRLLARQVVPADLQRLSAARGVAGRNGVQSSTLGQVLADIEHMHPGAGEGC
                     FVFATSHGAYNAGLVLVPSQDFLTPAALDHALDVGCGNAPTVVIISACFSGSFAKPPM
                     ARANRVILTAARDDRTSFGCGAGFQYTVYDRCLLQAVDRSAAWPAAYEMIKACVATQE
                     KAYQVKASEPQASFGDAVAGLALPGRP"
     gene            complement(3288..4136)
                     /locus_tag="VHX39_20520"
     CDS             complement(3288..4136)
                     /locus_tag="VHX39_20520"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3993562.1"
                     /translation="MLGVLMGAGVLAFSYGLIATLLYLFQRRILYHPNRTPPDLAAAG
                     LPQVRQITVPTPDGLALVAWYLPPAQSHGRVVLYLHGNAGHIGHRAYRLEPFQRLGWG
                     VLLLEYRGYGGNPGKPSEAGLILDAHAGMAALQEMGFPLSTILVWGESLGTGPAVQLA
                     VEHKVGALLLEAPYTSIADIARSRYRLFPVDWLLLDRFDSLDRIGSVQAPVLVMHGAY
                     DTIIPTAMGRAIYAASPDPKRLWIAPHAGHLDMVEAGATEVAGQFVAGLHAAAASDDR
                     ERVNPV"
BASE COUNT          855 a         1333 c         1360 g          829 t
ORIGIN      
        1 gtcgacctgg agaagattgc cgctgccgaa ctgggtctcg ccgacacgcc gggccgtccg
       61 cgacaacgtt cggtgagtgt tgaggacaac gggatgggcg atccgttgcg cttcgacgcg
      121 gagcgcctgc gcattctggt cgagcggcat ttgctgttca ccggcagtga acgcgcacgt
      181 gcattgctgg acaactggga taccgaactt gcgaagttcg tcaaagtcgt gccacgcgac
      241 tatcggcgag cgttgctgga cctgaaggcg gaacaagacg cggcgaagac agtcgcggca
      301 gagtgacatc gtcgtcatgg gcgggcttcg acccggccat ctctgtcagt attggttgcg
      361 atggatcacc gggacggggc ccggtgatga cggggaatgg cgaggcctgg gggatgcttc
      421 ccttcatgac ggcagcggaa tagccgccgg ccacgcgaat gttcgtggcg cggccagcag
      481 atttggagag ggtgatgggt aagccgaccg gatttttgga aattgaacgg cacgatcggg
      541 catatgaaaa gcctgccgag cgggtgaaga atttccatga attcaccaaa ccgctgccgg
      601 ccgcggaact gaccggtcag gcggctcggt gcatggattg cggcatcccg ttttgccata
      661 acggttgccc ggtgaacaac atgataccgg actggaacaa tctcgtctac cgcgaccagt
      721 tccgcgatgc gctgacggtg ttgcactcga ccaacaattt tcccgaattc accggccgga
      781 tctgcccagc gccgtgcgag gcatcgtgca cgctgaatat tgacgatagt ccggtgacca
      841 ttaaaaccat cgagtgtgcc attgtcgatc gcggttgggc ggaaggctgg atcctgcccg
      901 agccgcccgc ggtcaaaacc ggtcggcgcg tggcagttgt cggctcgggt cccgccggcc
      961 ttgcctgcgc gcaacaactc gcccgcgccg gtcacgcggt gacgctatac gagaagaacg
     1021 accgcatcgg cggcctgctc cgatatggca tccccgattt caagatggaa aagcaccaca
     1081 tcgatcggcg catggcgcag atggcagccg aaggggttga gtttcgcacg cgggtagaag
     1141 tcggtgtcag cctcagcgtt gactggctgc tcgaggaata cgatgcggtc gcgctgaccg
     1201 gtggcgccga atggccgcgc gatctggtac tgccgaaccg agggcacgac ggcatccatt
     1261 tcgcgatgga ctttctgacg caacaaaaca agcgcgacgc cggcgacgat gaggccaccg
     1321 cgtcgggcaa tgagccgatt tccgccaagg gcaagcacgt ggtggtgatt ggtggtggcg
     1381 acaccggctc ggattgtatc ggcacttcgg ctcggcaggg tgccgcttcg atcactcaga
     1441 tcgagatcat gccaaagccg ccggagaagg aaaacaaggc cctggtctgg ccggattggc
     1501 cgaacaaatt gcgctcttcg cacgcgcatg acgaaggcgt gaagcgcgac tggtcggtgc
     1561 acaccaagga cgcggtcggt gtcgacggcc aggtcaccgc actcgactgc gtctatatcg
     1621 agtgggtcaa gggcgccgat ggccggatgc agatggttga agtgccaggc agcgagtttc
     1681 agttgaaggc tgatctggtg ttgctggcca tggggtttct cggtccgcgg cgcaatgcgt
     1741 tgctggaaca ggcgggggtc gaactggact cgcgcggcaa cgtggcggcg aacacgatgc
     1801 aatacctgac ctcccgggag cggctgtttg ccgcaggtga catgcggcgg ggtcaatccc
     1861 tggtcgtctg ggctattcgc gaaggccggc aatgcgcgcg tgcggtggac cagttcctga
     1921 tgggaaagac ctcactgccg cggtaacatc ggtgcacggc gcgatcgtct tgcaatggac
     1981 gcgccaccgt tgaaaccgtc cttggagtga tccggatgag gttgttcctg tgttttgcgc
     2041 tcgcctggct cgccatggcg accgccacat tcgccgccga cgctccagcc gcaatgcact
     2101 acaaggccgt gctgatcgcc ggcgactgga gtgcggcggc cttcgaccac gcgacagcgg
     2161 cgatgcagca gcgtctgctc gcccgccagg tcgtgcccgc ggatttgcaa cggctgagtg
     2221 cggcccgggg cgtggctggc cggaatgggg tgcagtcatc cactctgggc caggtattgg
     2281 ctgacatcga acatatgcat cctggcgccg gtgagggttg cttcgtcttc gcaacatcgc
     2341 atggagccta taatgcggga cttgtgctgg ttccatcaca ggattttctg actccggcag
     2401 cgttggatca cgcgcttgat gttgggtgcg gcaatgcgcc gaccgtggtt atcatttccg
     2461 cctgtttctc gggcagcttt gcgaagccgc cgatggcgcg cgcgaaccgg gtcattctga
     2521 cggcggcgcg ggacgaccgc acgtcgttcg ggtgcggtgc gggatttcaa tacacggtct
     2581 acgatcgctg cctgttgcag gcggttgatc gttctgccgc ctggccggca gcgtatgaaa
     2641 tgatcaaagc ctgcgttgca acgcaggaga aggcgtatca ggtcaaagcc tccgagccgc
     2701 aagcctcgtt tggcgacgcg gtcgccggcc tggcccttcc cggccggccg taacgcgagc
     2761 cttccgcaac cgggcttgat ccgttacgca cccatttcgc catgccggcg gcgatctcgg
     2821 tctgggctgt tcattgcacc gcgagccgat ctctatccga aacgagactg tcgtcaatgg
     2881 accggccatt ccccaaccgt ccatatatat cgttgttgcc acttattgtt tcgacccggc
     2941 aggcaattga ccttctctgt tactctgtac ctctgttcct ctaaaataac atcttacggc
     3001 gccggtcacg gccgcgtcgc tgacgtttgg gcgcactctt acgtcccgat cgcatgaaaa
     3061 cccttttgcg aatgctggcc acttggaagt ctgtcacgtc aacagaagga aagaggtcta
     3121 ttttcgcgac tcgctcgacc atgacataat cgaaccattc tcgatcggtc aatcgtttgc
     3181 tcagttaatg tcgagccaga acaaactcaa agaacgcaaa aatatccatg cggccgacac
     3241 ggttggttgc ctgccccagg cataagccgc acttcgttcc gttggcatca aaccgggttc
     3301 acccgctctc ggtcatcact cgccgccgca gcgtgcaaac ctgcaacgaa ctgtcccgcg
     3361 acctcggtgg caccggcttc gaccatatcg aggtgaccgg catgcggtgc gatccaaagc
     3421 cgtttcggat ccggagaagc tgcataaatc gcacgtccca tcgccgtagg aatgatcgtg
     3481 tcgtaagcgc cgtgcatcac cagaaccggc gcctgcacgc tgcctatcct gtccaacgag
     3541 tcaaaccggt caagcaacaa ccaatcgacc ggaaacagcc gatagcggga ccgggcgatg
     3601 tcggcgatgc tggtataggg cgcctccagc aacaacgccc cgaccttgtg ctctaccgcc
     3661 aattgcactg cgggtccggt gccaagcgat tcaccccaca caaggattgt cgacagcgga
     3721 aaccccatct cctgaagcgc tgccattccg gcatgggcat cgaggatcaa accggcctcc
     3781 gagggcttgc ccggattgcc gccgtagcct cggtactcca gcaacaacac accccagcca
     3841 agccgttgaa acggctccaa ccggtaggca cgatggccga tgtgccccgc attaccgtgc
     3901 aggtagagaa ccacccgacc gtgactttgc gccggtggca gataccaggc gaccaacgcc
     3961 aacccgtccg gcgtcggcac cgtgatttgc cgcacctgag gcagcccggc tgcggccaga
     4021 tcgggcggcg tacgattggg gtgatacaga atccgtcgtt ggaacagata caatagcgtc
     4081 gcaatcaaac cgtaggagaa tgccagcact cccgcaccca tcagcacgcc cagcatccag
     4141 cttccctctc ggcttccgct gggacaatgc ctcgcccgga gaccatccgc catggcgcgc
     4201 acggtatccg cacgtcccag ccgggtactt tccttgctgt caacgcaaag ttagaatgtc
     4261 ccctggttct gcaacgcgag aatgtcccct cgggcaccga agtggggtgg gtaacgccgg
     4321 ggagcgcgcc cacaacaagc gccgtagcga gccggcgtta tccacgcccg atcggca
//
LOCUS       DATAVD010001074         2217 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1220992, whole genome shotgun sequence.
ACCESSION   DATAVD010001074 DATAVD010000000
VERSION     DATAVD010001074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1220992"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            228..593
                     /locus_tag="VHX39_20525"
     CDS             228..593
                     /locus_tag="VHX39_20525"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX3993563.1"
                     /translation="MQAAEIDEQFPVVDIDSPALEAARMLAEHSLPGIVVVTADGEPY
                     AVLPASQVVRFIVPNYVQDDPVLAGVLAESMADRAAEKLGGKTLRELLPQHQLTLPTA
                     NADDTIIEVAAMLGGCEVP"
     gene            complement(830..1438)
                     /locus_tag="VHX39_20530"
     CDS             complement(830..1438)
                     /locus_tag="VHX39_20530"
                     /inference="COORDINATES: protein motif:HMM:NF015146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEX3993564.1"
                     /translation="MTDKNKYQRRRELTIAIEQCHKCPDMNEPGISEAAPGFGSIRSP
                     VVIVGQSLCRKCMDTKVPFTGGSGRLIDDALAEAGLDKPDIFITNVVHCHPRGDRESL
                     PHEIENCKGYLFDELEIISPRLVIGLGKDVEKTLLARYREVRTLHWQPFVAPMNPAPT
                     ERYFLFMRHPSWILRKHDDSLERQYVNGFAAALRWAFAYRQS"
     gene            1933..>2217
                     /locus_tag="VHX39_20535"
     CDS             1933..>2217
                     /locus_tag="VHX39_20535"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEX3993565.1"
                     /translation="MEAWDAIRARRNVRQYKPDPVSDDDLNRIAEAGWRAPSAKNRQA
                     WDFVIVTDKAQLKELSTVWQGAGHIAGAAAAIALVIPEPPDERRRVTDQYD"
BASE COUNT          447 a          651 c          684 g          435 t
ORIGIN      
        1 gggcgttagg ttctcgttaa agatctggac tggaccgtca agaggccgct agcgctcgcg
       61 tgcggatggc taagcgggcg cacgctgcat cgatgtacaa cgtccactca gtcgttgtga
      121 gcacgcggcc gcgccccgtg gccctgtcgc agtaccgcga accgtcctct accgcggtcg
      181 gtgccagcgt gcgccgtgcg cgggtgaagt agcgagcccg ggtcgtcgtg caggcagcgg
      241 agatcgacga gcagttcccg gtggtggaca tcgactcgcc tgccctggaa gccgccagga
      301 tgcttgccga acacagcctg cccgggatcg tcgtagtaac tgcggacggg gagccttatg
      361 cagtgctgcc tgcctctcaa gtggtgcgct tcatcgtgcc caattacgtg caggacgatc
      421 ccgtgctggc cggcgtgctc gcggagtcga tggccgaccg ggctgcggag aagttgggcg
      481 gcaagacgct tcgcgagctg ctgccgcaac accagctgac actgcccacc gccaacgcgg
      541 atgacacgat catcgaagtg gccgcgatgc tgggaggctg cgaagtcccc tgatagccgt
      601 gatgaagcaa ggcaggctgc acgtcgtgat caccacgtcg cggctcttgg cgatggcact
      661 gaagtgcggg ttgaccgagc aggcatggac cgccgtcgta ccggtttgac gacggagcgg
      721 gcatcagtgt caactttgca gtttctcgaa cagtcccccg accaacctcg atctagggct
      781 tggcaatagg ggcttgctcg atcccgcggc caacggatta ttggcctgat cagctttggc
      841 ggtacgcgaa agcccaccgt aatgcggccg caaagccatt tacgtattgc cgctcaagag
      901 aatcatcatg ctttctcaga atccacgatg gatggcgcat aaacagaaag tatctctccg
      961 tcggtgcagg gttcattggc gcaacaaatg gctgccaatg tagtgttctg acctcgcggt
     1021 acctggccag caacgttttc tctacgtcct ttcccaatcc gatcaccagc cgtggcgaga
     1081 tgatttcaag ctcatcaaat aggtagccct tgcagttttc gatttcgtgc ggcaatgact
     1141 cgcgatcgcc gcgcggatga cagtgaacaa cgttggtaat gaagatgtct ggcttgtcca
     1201 gaccagcttc ggctagagca tcatcgataa ggcggccact gccgccagtg aacggaactt
     1261 tggtgtccat gcacttcctg cacaggctct ggccgacgat cacgaccggc gaccggattg
     1321 atccgaaacc cggcgccgct tcgctaatgc caggttcatt catgtctggg cacttgtgac
     1381 actgctcaat cgcgatagtc aattctctac ggcgctggta cttgttctta tctgtcatga
     1441 gttgcgccga tctagcggca agacgttcgt cgcggtcgat gtgcgctcaa accagtatcc
     1501 acggctgcac ggtacgccaa accgccgaca aggtgggtct ttttgacacc ggttttgtac
     1561 ctctgattgc accatcagat tgcgtaggac ttgcgtaaat ttgggtcaaa tcgtgcgaca
     1621 tggtgaggtt gattcggctg cgaaaaaagt cactacctgc ataaacatat ggtggggccg
     1681 gcggggctcg aacccgcgcc caacggatta tgggcctgtg ggctagggga cggtgcgctc
     1741 ggccgagaga tgaagccgca tcgcggaccg ccatactgcc cgcgccgacg cgagtcggtg
     1801 tttcgccagc gactgcctga ccccacaagg gcttgggagt cggcaccgag atgccgctcg
     1861 acggcgatgg caccatggtc ggagacaaga tcacgatcgc actggcgcca taggcgcaaa
     1921 cggaaggatg acatggaagc ttgggatgcg atccgcgccc gacgcaacgt ccgtcaatac
     1981 aagccagatc cggtgtccga cgacgacctg aaccgcatcg ccgaggccgg ctggcgggca
     2041 ccgtcagcga agaatcgcca agcttgggac tttgtcatcg tcaccgacaa ggctcagctg
     2101 aaggaacttt caacggtatg gcaaggtgcc ggtcacatcg cgggcgctgc ggccgcgatt
     2161 gccctggtta tcccggaacc gccggacgaa cggcgcagag tgaccgatca gtacgac
//
LOCUS       DATAVD010001075         5776 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1593945, whole genome shotgun sequence.
ACCESSION   DATAVD010001075 DATAVD010000000
VERSION     DATAVD010001075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5776
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1593945"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..673)
                     /locus_tag="VHX39_20540"
     CDS             complement(<1..673)
                     /locus_tag="VHX39_20540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006558701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEX3993566.1"
                     /translation="MFSRLLGFMSADMAIDLGTANTLVYVKGRGVVLNEPSVVAIAES
                     RGKKHVVAVGEEAKQMLGRTPGFITASRPLRDGVIADFEVAEEMIKHFIRKVNGRRGW
                     ASPLIIVCVPSGSTAVERRAIQESAESAGARKVQLIEEPMAAAIGAGLPVTEPSGSMI
                     VDIGGGTTEVAVISLGGIVFSRSVRVGGDKMDEAIISYIRRAHNLLIGESSAERIKMD
                     VGAARV"
     gene            complement(869..1615)
                     /locus_tag="VHX39_20545"
     CDS             complement(869..1615)
                     /locus_tag="VHX39_20545"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3993567.1"
                     /translation="MADRVAVITGAGSGIGRASALALCKDGWAVALLGRRKDALEETA
                     GLAAGGKTLPIPTDVTDPDQVIAAFAAVKEAFGRVDMLFNNAGGNVPSTNFGDFTWEM
                     WRRVVAVNLDAMFMCANQAFRMMRDQTPRGGRIINNGSISAHVPRPGSVAYTSTKHGV
                     TGLTKSIALDGRQYDICSGQIDIGNAATPMTARSSNGQMQPYGQMAVEARMDVNHVGQ
                     QVAFMANLPLESNVQFVTIMATKMPFVGRG"
     gene            1714..2727
                     /locus_tag="VHX39_20550"
     CDS             1714..2727
                     /locus_tag="VHX39_20550"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX3993568.1"
                     /translation="MARFAAIGLDHRHVYDMTEGLLNAGATCAGYNSDTTDPRVLAGF
                     RKRFPDVPEVSRERLLDDPSIDFIVLSAVPCDRAALAIEAMRRGKDVVSDKPGVTSFE
                     QLEAVRQAVRETGRLWSICVGRVASPAIQETVRVVRSGELGQLVQVMSLAPHRLNRAL
                     RPSWFFDRPAYGGIINDIGVHSIDQFLALADVAEAEIESATIGAFGTAPEGFEDFAEI
                     TLRTPSVRGYCRVDWFTPDGLATWGDGRLFLVGTEGTLELRKNLDLEGRPGSNHMFVT
                     GKHQTRYQDCSSLPVTYYRDVIAAVRTRDFAVLPQEQVFTVCRMALQAQASAKRYVAE
                     RRV"
     gene            2724..3716
                     /locus_tag="VHX39_20555"
     CDS             2724..3716
                     /locus_tag="VHX39_20555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX3993569.1"
                     /translation="MIGIAIIGLGNALAPHAKAVQELADRVRVVHAVARNADQRRRVA
                     ELYGFPTSADAAAAIADPRVDALLILTPTNAHLDIAEAAFAAGKHVLCEKPLETTVAR
                     SERLVACGRRADRRLAVMLQLRFRAASRRLKALLEADALGEIQAASMTVPWWRPQSYY
                     DEPGRGVKARDGGGVLMIQAIHTLDLFRWCVGVSAVEAAIVRTTSLHRMETEDYATAL
                     VRLGNGAPGSIVATVAAFPGGPEQIMVIGSKGTARLEGSSLRASFLDGTEDVVQDGGG
                     SGSGSGFMAFSHEPHKAVISDFLDAIEQGRDPAIPGEEALATQRVIDMIINQGV"
     gene            3720..4205
                     /locus_tag="VHX39_20560"
     CDS             3720..4205
                     /locus_tag="VHX39_20560"
                     /inference="COORDINATES: protein motif:HMM:NF014517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HEX3993570.1"
                     /translation="MQTLLPLAEQLGARLKARGETIAIAESSTGGLISAALLSVAGAS
                     VYFRGGSVIYTAYARAGFLDIPNPLPAPIERASTEPYALLLANTVRERLSATWGLGET
                     GATGPTGNRYGDKAGHTCIALTGPGVSRAITVETGHGDRVANMREFSQRAMQLLAEVL
                     G"
     gene            complement(4305..5120)
                     /locus_tag="VHX39_20565"
     CDS             complement(4305..5120)
                     /locus_tag="VHX39_20565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3993571.1"
                     /translation="MNWGTLSRAERDAAYDNIAAVTDSMALNTARAEASAAFRAAHGG
                     HLDLRYGPRERNTWDLYPAADPSAPCLVFIHGGYWQRNSKDQFASLIAGPYALGWSAA
                     LPGHTLAPDASLTEIVAEINAALDWLAANRKAHGMNGPVVLSGWSAGGHLTAICLGHP
                     LVDAGLAISGIFELGPLRDTVLNDKLRLTDDEIETLSPLRLPMINKPLAITYGTAELP
                     PLVSDSRALHARRSAAHLPGALIPVPGGNHFTIVKQLQDERGILTRHLPTLLD"
     gene            complement(5117..>5776)
                     /locus_tag="VHX39_20570"
     CDS             complement(5117..>5776)
                     /locus_tag="VHX39_20570"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX3993572.1"
                     /translation="VGFWRLKQALDAHGIAPTLAINGAVPAAYPRVTHAARDAGWEFM
                     VHGYDQMATHLVDDQRAMIRSAIDALGGAAGHAPVGWLAPGLTETLETPDLLAEAGIR
                     YCADWVIDDLPVTLQTTHGPMLTMPYSVELNDIPIMMIQHHRAEELFHRTVAQFDRLY
                     EEAEREGAKVMGLAVHPYISGVPHRIGWFEKALAHMAARSGTLFWQGRQIMDWYLRAT
                     A"
BASE COUNT         1067 a         1734 c         1833 g         1142 t
ORIGIN      
        1 gaacgcgtgc cgcaccgaca tccatcttga tccgctcggc ggaggattcg ccgatcaaca
       61 ggttatgagc ccgacgaatg taagagatga tcgcctcatc cattttgtcg ccgccgaccc
      121 gtacgctgcg ggaaaagacg ataccgccca acgagatcac agcgacttcg gtggtgccgc
      181 cgccgatgtc gacaatcatc gagccggacg gttcagtgac cggcaatccg gcgccaatcg
      241 cggcggccat cggctcttcg atcaattgga ctttgcgggc gccggcgctt tcggcacttt
      301 cctggatcgc tcgccgctca acggccgtgg agccggaggg cacgcaaacg atgatcagcg
      361 gcgaggccca acctcggcga ccgttcacct tgcggatgaa atgcttgatc atttcctcgg
      421 cgacttcgaa atcggcgatg acaccatcgc gcaacgggcg gctcgcggta atgaagccgg
      481 gcgtacggcc gagcatctgc ttggcttcct cacccacagc gaccacatgt ttcttgcccc
      541 ttgactcagc gatcgccacc acactgggct cgttcaggac aacgcctctt cccttcacat
      601 acaccagcgt gttggcggtg ccgagatcga tcgccatgtc tgccgacatg aagccgagca
      661 gccgagagaa catacctgaa acctttgaca atggctgacg tttcgctggg gaacgccggg
      721 cttagacccg ggaaggggca ttccacaaga ggttgaccca aacagcgccc atggcctggg
      781 cgccgtgctg ccttggccgg gtgccaggcg acggacctgc cggatcaggc aggtccggaa
      841 aaacctggcg cccccggtcc tgtcgttctc agccgcgtcc gacaaacggc atcttggtcg
      901 ccatgatggt gacaaactgg acgttcgatt ccagtggcaa attggccatg aacgcaacct
      961 gctggccgac gtggttgacg tccatccggg cctcgaccgc catttggccg tacggctgca
     1021 tctgcccgtt ggacgagcgt gcggtcatcg gtgtggccgc attgccgatg tcgatctgtc
     1081 cggagcagat atcatattgc ctgccgtcca gtgcgatcga tttggtaaga cccgtaacac
     1141 catgtttggt ggacgtataa gccaccgatc ccggccgcgg cacgtgcgcg gagatcgagc
     1201 cgttgttgat gattcgcccg ccgcgcggcg tctgatcgcg catcatgcgg aacgcctggt
     1261 tggcgcacat gaacatcgca tcgagattaa cggcgacgac ccgccgccac atctcccatg
     1321 taaaatcgcc gaaatttgtc gatggcacat tgccgccggc gttgttgaac agcatgtcga
     1381 cccggccgaa tgcttccttg accgcggcaa atgctgcgat cacctgatcc gggtccgtca
     1441 catcggtcgg gatcggcaag gttttgccgc ctgcggcgag gcccgccgtt tcttccagcg
     1501 catccttgcg tcgtcccagc agtgcgacgg cccaaccgtc cttgcaaagc gcgagagcag
     1561 aggcccggcc aatgccgctg cccgctccgg taatgaccgc gacccgatcc gccatggtgt
     1621 tttctccctc tccaatgggt attcggccca ttgtggacct tggttgcgag aggtggaaga
     1681 tggtgcgagc ctgatggtac gggaggagac atcatggccc gctttgccgc gatcggattg
     1741 gaccaccggc atgtctatga catgaccgag gggttgttga acgccggtgc aacgtgtgcc
     1801 gggtacaatt cggataccac cgacccgcgc gttctggctg ggttccgcaa gcgttttccg
     1861 gatgtcccgg aggtgtcgag ggaacgtttg ctcgacgatc catcgatcga tttcatcgtg
     1921 ctttcggccg taccgtgcga tcgtgccgcg ttggcgatcg aagcgatgcg gcgcggcaag
     1981 gatgtcgtat cggacaagcc gggtgtcaca agcttcgagc aactggaggc agtccgccag
     2041 gcggtccggg aaaccggccg gctgtggtcg atctgtgtcg ggcgcgtggc gtcgccggcg
     2101 atccaggaaa ctgtgcgcgt cgtgcgttcg ggggaactgg ggcaattggt ccaggtcatg
     2161 agcctggcac cgcacaggct caatcgtgcg ctgcgcccgt cctggttctt cgaccggccg
     2221 gcttatggcg gaattatcaa cgatatcggc gtgcactcga tcgatcagtt cctggcgctt
     2281 gcggacgtgg cggaagcgga gattgaatcc gcaacgatcg gcgcgttcgg caccgcgcct
     2341 gaaggatttg aggatttcgc cgaaatcacc ctgcgaacgc cgtcggtacg gggctattgc
     2401 cgcgtggact ggtttactcc ggatgggctg gcgacctggg gcgacggacg gttatttctg
     2461 gttggcaccg aaggcacgct agaattacgc aagaacctcg acctcgaagg acggccgggg
     2521 tcgaaccata tgttcgtcac gggaaagcat cagactcgct accaggactg tagttcgctt
     2581 ccggtcacct attatcgcga tgtcatcgct gccgtgcgga cgcgggattt tgccgtgttg
     2641 ccccaggagc aggtgtttac cgtctgccgt atggcactgc aggcgcaagc aagtgcgaag
     2701 cgatatgtcg cggaacgccg agtgtgatcg gtattgcgat catcggtctc ggcaatgcat
     2761 tggcgccgca tgccaaagcc gttcaggagc tggccgaccg ggtacgcgtc gtccatgcgg
     2821 ttgccagaaa tgcagaccag cggcggcgtg tggccgaact ttatggcttt ccgaccagcg
     2881 ctgatgcggc agcggcaatt gccgacccac gcgttgacgc cctgctgatc ctgacgccga
     2941 ccaatgctca cctggatatc gccgaggcag cgttcgcggc cggtaagcac gtgttgtgcg
     3001 aaaagccgct ggaaaccact gttgcgcgtt ccgaacgtct ggtggcgtgc ggccgtcgtg
     3061 ccgatcgacg gttggcggtg atgttgcaac tcaggtttcg cgctgccagt cgccggttga
     3121 aagcgctgct ggaggccgac gcactgggtg agatccaggc tgcctcgatg accgtgccgt
     3181 ggtggcgccc gcagtcttat tatgacgagc ccggccgcgg cgttaaagca cgtgatggcg
     3241 gcggcgtgct catgatccag gccatccata ccttagattt gtttcgttgg tgcgtcggtg
     3301 tcagcgctgt cgaggcggcg attgtgcgaa cgacgtcgtt acaccgcatg gagacggaag
     3361 attacgctac cgccctggtc cggcttggca atggtgcgcc gggttcaatt gtcgcgaccg
     3421 ttgctgcttt ccctggtggt ccggagcaaa tcatggtgat cggttcgaag ggtaccgcca
     3481 ggttggaggg cagcagcctc agagcttcgt tcctggacgg aaccgaagac gtggttcagg
     3541 atggcggtgg gtccggcagc gggtccggct tcatggcatt ttcgcatgag ccgcacaaag
     3601 ccgtgatcag cgactttctc gacgcgatcg aacaggggcg cgatccggcc atcccggggg
     3661 aggaagccct cgcaacacaa cgtgtcatcg acatgatcat caaccaagga gtgtgaacga
     3721 tgcaaactct gctgccgttg gccgaacaac ttggcgctcg tctgaaagcg cgtggcgaaa
     3781 cgatcgcgat cgcagaatcc tcgactggag ggttaatatc ggcggcattg ctgtcggtgg
     3841 ctggcgcatc ggtctatttc cgcggcggga gcgtgattta taccgcttat gcgcgggctg
     3901 gttttctcga tattccgaac cctctgccag cgccgatcga acgggcttcc acggagccct
     3961 atgccttgtt gctcgccaac acagtgcgcg agcgcctgag cgcgacctgg ggcctgggag
     4021 agaccggtgc gaccggcccc accggcaacc gatatggcga taaagcaggc cacacctgta
     4081 tcgcattgac cggtcctggc gtttcgcggg ccataacggt ggagaccggg cacggcgacc
     4141 gggtcgccaa catgcgggag ttctcccaac gggccatgca acttcttgcc gaagtactgg
     4201 gctgacacgg aagtcgttgc gagtacaggc ggatggactt tgcgtcgctg tgctcgcacg
     4261 caaccgttca aatgttgtag tcagagatgc attgcgcgac cggatcaatc caacaaggtt
     4321 ggcaggtgcc gggtcaggat tccacgttcg tcctgtagct gtttgacgat ggtgaagtgg
     4381 tttccacccg gcaccggaat aagtgcgcct ggaagatgcg cagccgagcg ccgggcgtgc
     4441 agcgctcggc tgtcggagac aagtggtggc aattcggcgg taccgtacgt gatcgccaaa
     4501 ggcttgttga tcatcggtag gcgcagcggc gacaaagttt cgatctcatc atcggtcaga
     4561 cgcagcttgt cgttcagcac cgtgtctcgc aaggggccca gttcaaatat gccggaaatg
     4621 gcgaggcccg cgtcaaccag tggatgtccg aggcatatcg cggtcagatg tccgccagcg
     4681 gaccaaccgg atagcacgac aggtccattc atgccgtgcg ctttgcggtt ggctgcgagc
     4741 cagtccagcg ctgcgttgat ctcggcaacg atttccgtca gcgatgcgtc cggcgccagc
     4801 gtgtggccgg gcaaagccgc cgaccagcca agcgcgtaag ggccggcgat caggctggcg
     4861 aactggtcct tgctgttacg ctgccaatag ccgccgtgaa tgaagacaag gcaaggtgca
     4921 ctgggatcgg cggccggata caggtcccag gtgtttcgct cgcgtggtcc gtaacgaaga
     4981 tcgaggtgac cgccatgcgc tgcccgaaat gccgccgagg cctcggcacg cgcagtattc
     5041 aacgccatgc tgtccgttac ggcagcgata ttgtcatacg ccgcatcgcg ttccgctcgg
     5101 ctcagggttc cccagttcat gctgtcgccc tgagatacca gtccatgatc tggcggccct
     5161 gccagaacag cgtgccagac cgcgccgcca tatgtgcaag ggctttctcg aaccagccaa
     5221 tccggtgcgg tacaccgctg atatagggat gcaccgcgag gcccatgacc tttgctccct
     5281 cgcgctccgc ctcctcgtat agccgatcaa actgagcgac ggtgcggtgg aacaactcct
     5341 cggcgcgatg atgctggatc atcatgatcg ggatgtcatt cagttcgaca ctgtacggca
     5401 tcgtcagcat cggcccgtgc gttgtctgca gcgtcacagg caaatcgtcg atgacccagt
     5461 cggcgcaata tcggatgccg gcttcggcca gcaaatcggg agtttccagg gtttcagtca
     5521 gaccgggcgc cagccagccg accggtgcat ggcctgcggc cccgcccaac gcatcgatcg
     5581 cggaacggat catcgcccgc tgatcgtcca ccagatgtgt cgccatctgg tcgtagccat
     5641 gcaccatgaa ctcccagccg gcgtcgcgcg ctgcatgtgt cacgcgagga taggccgctg
     5701 gtaccgcgcc gttgatggcc agcgtcgggg cgatgccatg tgcgtccagg gcttgcttca
     5761 gacgccagaa gccgac
//
LOCUS       DATAVD010001076         3681 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2895707, whole genome shotgun sequence.
ACCESSION   DATAVD010001076 DATAVD010000000
VERSION     DATAVD010001076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3681
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2895707"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..802
                     /locus_tag="VHX39_20575"
     CDS             <1..802
                     /locus_tag="VHX39_20575"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3993573.1"
                     /translation="PSIGLFAGAVDDPDISAAICRAYNRWLADYCKPYPDRLFGIAMV
                     PLQSVPHAIAEMKFAREQLGMTGIFVRPNPYNNKMIHHPDYEPFWSAVEQYDMAVGFH
                     EGGNSGMAQVGMDRFETRGARHIVTHTMEMMMACLGMIWGGVIDKHPKLRVAFLESGG
                     GWIVPWLERMDRHFDDQGFNDSGLSMRPSEIFQRNCWISFEPVEGSLRVLADYIGPHK
                     ILWATDYPHPDGFFPGAPDMVRGKLAGLSQETQYQVLAGGAKGFYGLN"
     gene            complement(1331..2422)
                     /locus_tag="VHX39_20580"
     CDS             complement(1331..2422)
                     /locus_tag="VHX39_20580"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent alcohol dehydrogenase"
                     /protein_id="HEX3993574.1"
                     /translation="MRAAVFHEAHQPMTIETLEIAKPQAHEVLLNTAYAGLCHSDLHF
                     LEGLYPIPTPVVLGHESSAVVEAVGSEVKYVKPGDRVITCLSVFCGTCEYCTTGRPNL
                     CANPEVKMPPGKAQRLFWQGKAVGQFANLSSFAEQLLVHENAVVKIGDDIPLNVAALV
                     GCGVITGAGAVINTAKVPPGSTVAVFGCGGIGLSAVNGAAIAGADRIIAIDRISSKLD
                     VARLMGATDVINASNVDPVEAIKELTGGGVEFSFEAVGLKRTAEQCFESLRAGGTATI
                     IGMVPYGMKIELHGYDFLRERKIQGSSMGSNRFRVDMPKLLNAWKKGHLKLDHLISGN
                     IKLDEINDGYKKLQSGDVLRQLIDFGVAK"
     gene            complement(2441..>3681)
                     /locus_tag="VHX39_20585"
     CDS             complement(2441..>3681)
                     /locus_tag="VHX39_20585"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3993575.1"
                     /translation="STAPPPSVERHAARRSTRLPNRNEETYAMITKFNTVYAGHVDIA
                     DRGQDGTPANDRRYSNAHLATVFSKAEAIATLMDETGWNTLWMAEHHFQPEGYEVIPN
                     LLMLAVHLCHRTRNLKIGCGFNIAPMWHPLRLAEDYAVADILTKGRTVFGVGRGYHTR
                     EVESFGAPMQDQNANRELFEEQVEIIFKSFNNERFSHQGKYYTLPPEVPYRGYTLKDL
                     TLVPRPVHLPVECWQPVVSASARGLDFMVKHGIKGAVGGGAATLERGPISAYQEAGQR
                     AGKDWKLGENLMIGVTINLADSRQRALQEMVPLYEEHAKMFAPLNFMPGMTPEQVAAV
                     GRRGGWYEAGVPRVESYIEKGGWFADTPEQLVAFLKDLEIRYPGLEHISLSTPMGTPE
                     AIMLEQYRRVAAEVMPHFKH"
BASE COUNT          681 a         1157 c         1089 g          754 t
ORIGIN      
        1 tccctcgatc ggtttgttcg ccggtgcggt ggacgacccg gacatttcgg cggccatttg
       61 ccgcgcctat aaccgctggc tcgccgatta ctgcaagcct tatccggatc gcctgttcgg
      121 catcgcgatg gtgccgttgc aatccgtgcc gcacgccatc gccgaaatga aattcgctcg
      181 tgagcagctc ggcatgaccg gcatcttcgt gcggcccaac ccgtacaaca acaaaatgat
      241 ccaccacccc gattacgagc cgttctggtc cgcggtggag caatacgaca tggccgtcgg
      301 gttccatgaa ggcggcaatt ccggcatggc gcaggtcggc atggaccggt tcgaaacgcg
      361 cggcgcccgc cacatcgtga cccatacgat ggaaatgatg atggcctgcc ttggcatgat
      421 ctggggcggc gtgatcgaca agcatcccaa actgcgggtc gcgttcctcg agtcaggcgg
      481 cggctggatc gtgccgtggt tggaacggat ggaccggcac ttcgatgacc agggtttcaa
      541 tgactccggc ctctcgatgc gtccgagcga aatcttccag cgtaattgct ggatttcgtt
      601 cgaaccggtg gagggcagcc tgcgtgtgct cgccgactat atcggcccgc acaagattct
      661 gtgggcgacc gactatccgc acccggacgg gttcttcccc ggcgcgccgg acatggtgcg
      721 aggcaaactc gccggtctgt cgcaagaaac gcagtaccag gtgctggccg gcggcgccaa
      781 gggattttac ggcctgaact gaccctgcgt catggcccga cctggtcggg ccatcctatc
      841 cgccacaatc cggccccaga ttccccgaac aaaccggagt tctggggcca aaaggtttgc
      901 acccttcggg caaatctgat ctgaaaatgc attggggggc tgcgcgatcg tgcctcagtc
      961 cattggcagt catttggctt gccaaagaaa agtttaaccg cagatcgaag cagatgtacg
     1021 ccgattcacg cagatcggct gaatgaacct atgcaggcat gatcagtcac ctcgcacgtg
     1081 gtttcgccgc gagtgaattt cgacgggcca atccctgacc gtaacgtctg gtctccggct
     1141 tgctaaccgt cccaaatctg cctgcatccg cgtccatcgg ttctgatctg cggttaaact
     1201 ttcttgcaaa ccaatgaaca agcacattgc tgcagagcgc cgcgcgagcc gagctaccgc
     1261 cctgaaaggc gcgcccgctc agccgacccg gacgcgaggg cggcgcggaa ccacgccgcc
     1321 caaaagtcac ctatttcgcg acgccaaaat caatcaattg ccgcagcacg tcgccgctct
     1381 ggagcttctt gtacccgtcg ttgatctcgt ccaatttgat gttgcctgag atcaggtgat
     1441 caagtttcag atgccccttc ttccaggcat tcagcagctt cggcatgtcg acgcggaagc
     1501 ggttgctgcc catcgaggag ccctggatct tccgctcacg caggaagtcg tagccatgca
     1561 gctcgatctt catgccatat ggcaccattc cgataatcgt cgcggtcccg cccgctcgga
     1621 gtgactcgaa acattgctcg gcggtgcgct tcaggccgac ggcctcgaag gagaattcga
     1681 cgccgccgcc ggtcagttcc ttgatcgcct cgaccggatc gacgttggag gcgttgatca
     1741 cgtcagtggc gcccatcaac ctggcgacat cgagcttgga ggagatccga tcgattgcaa
     1801 tgatgcgatc ggccccggcg atggcggcgc cgttgaccgc cgagagcccg atgccgccgc
     1861 aaccgaatac cgcgactgtg gatcccggcg gcactttcgc cgtgttgatc actgcgcccg
     1921 cgccggtgat gacaccgcaa cccaccaggg cagcgacgtt cagtgggatg tcgtcgccga
     1981 tcttcaccac ggcattttca tgcaccagca attgctcggc gaatgacgac aggttggcga
     2041 actgcccaac ggccttgccc tgccagaaca gccgctgcgc cttgcctggc ggcatcttga
     2101 cctcgggatt ggcgcacagg tttggccggc ccgtcgtgca atattcgcag gtgccgcaaa
     2161 acaccgagag gcaggtgatc acccggtcgc cgggtttgac gtatttgacc tcgctgccaa
     2221 cggcctcgac gacggccgag gattcgtggc ccagtacgac cggcgtcggg atcggataca
     2281 ggccctcgag gaaatgcaga tcgctgtggc ataatcctgc gtaggcggtg ttcagcaaga
     2341 cctcgtgcgc ctgcggtttg gcgatctcga gtgtctcgat ggtcatcggc tggtgggctt
     2401 catggaagac ggccgctcgc attgtttctc tcccgactga tcagtgtttg aagtgcggca
     2461 tcacctcggc cgcgacgcgc cggtattgtt ccagcataat ggcctccggt gttcccatcg
     2521 gtgtcgaaag gctgatgtgc tcaagcccag gatagcgaat ttcgagatct ttgaggaagg
     2581 cgacgagttg ttcgggggta tcggcgaacc agccgccttt ttcgatgtag ctttccaccc
     2641 gcggcacgcc cgcctcgtac cagccgccgc ggcgtcccac tgcggccacc tgctccggcg
     2701 tcatgccagg catgaaatta agcggcgcaa acatcttggc atgctcttcg tagagcggaa
     2761 ccatctcctg caacgcccgt tgccttgaat cggcgagatt gatcgtgacg ccgatcatca
     2821 ggttctcacc aagcttccag tccttgccgg cgcgctgtcc ggcttcctga tacgcgctga
     2881 tcggtccgcg ctccaacgtc gccgcgccgc cgcccacggc acccttgata ccgtgcttca
     2941 ccatgaaatc gagcccgcgt gccgaggcgc tgaccaccgg ctgccagcac tccaccggca
     3001 gatgcaccgg ccgcggcacc agcgtcaggt ccttcagcgt gtagccacgg tacggcacct
     3061 ccggcggcag cgtgtagtac ttgccctggt gcgaaaagcg ttcgttgttg aaggatttga
     3121 agatgatctc gacctgttcc tcgaacagct cgcggttggc gttttgatcc tgcatcggtg
     3181 cgccgaagct ttccacttca cgcgtgtggt aaccgcggcc gacgccgaac accgtgcgac
     3241 ccttggtcag gatatcggca acggcgtaat cctcagccag ccgcagcgga tgccacattg
     3301 gcgcgatatt gaacccgcag ccgattttca ggttgcgcgt gcgatggcac agatgcactg
     3361 cgagcatcag caaattcggg atcacttcgt aaccttccgg ttggaagtga tgctcggcca
     3421 tccatagcgt attccagccg gtctcatcca tcagcgtggc gatcgcctcg gccttggaga
     3481 acacagtggc gagatgcgcg ttcgagtagc gccggtcgtt ggccggcgtg ccgtcctggc
     3541 cgcggtccgc gatatccaca tggccggcgt agacagtgtt gaattttgtg atcatcgcgt
     3601 aggtctcctc attgcggttt ggcaaccgcg ttgatcgcct tgcggcgtgt cgttccaccg
     3661 atggcggcgg agcagtcgaa a
//
LOCUS       DATAVD010001077         2717 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1221326, whole genome shotgun sequence.
ACCESSION   DATAVD010001077 DATAVD010000000
VERSION     DATAVD010001077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2717
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1221326"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..218)
                     /locus_tag="VHX39_20590"
     CDS             complement(<1..218)
                     /locus_tag="VHX39_20590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993576.1"
                     /translation="MSALRAGKPVIVRDGREIVMAYAVETLTAAQLAAARKRMKAVLV
                     LTHARARTLKIRLYTPQAVALTIAKDAS"
     gene            396..1079
                     /locus_tag="VHX39_20595"
     CDS             396..1079
                     /locus_tag="VHX39_20595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3993577.1"
                     /translation="MPSAKRVLLVDDDTMLSGSLAEQLAAEGDYAPVEAGSVAEGRQK
                     ARDGLYEFMILDVSLPDGDGRKLCRALRDDGITCPIVLLTAADSDADTIEGLDAGAND
                     YITKPFRFAVLMARIHAHLRNHEQSEEAIYRIGPYTFRPSAKLLLDSQDKKIRLTEKE
                     TNILKFLYRSGDTVARETLLHEVWGYNPAVTTHTLETHIYRLRQKIENNPGQAQILVT
                     ESGGYRLVA"
     gene            1212..2240
                     /locus_tag="VHX39_20600"
     CDS             1212..2240
                     /locus_tag="VHX39_20600"
                     /inference="COORDINATES: protein motif:HMM:NF022441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2807 domain-containing protein"
                     /protein_id="HEX3993578.1"
                     /translation="MQSRTKSFMGGAAIAAFLITAGGADAGQDQSWFQQPAQNFNVHA
                     VALDHVIADVVIMVKDGGPASYAVQGPRYLVNAMHAQATGGVLTIAGPQHQGGHSVNV
                     WDWSKWFDYSDVNQGHMKVTLSVPRGSDISTRHMIGDITAGDTDGHLSVETISGDVRI
                     GRVTDAKVKIVGGGDVSIASVRDSVQADVSGSGDVKIGNIGGAASVTVAGSGDTSLGN
                     VGSAVNVNIAGSGDLNVGTVNGPVTVSLAGAGDVHIANGKADPLKVSMVGGGDFSFGG
                     MAVNPTISAMGSGDVWMRGYTGHLSTSGMADVHVGDRDDDGHHHWHLPAIPVPPAPPA
                     PPAPPHGG"
     gene            complement(2247..>2717)
                     /locus_tag="VHX39_20605"
     CDS             complement(2247..>2717)
                     /locus_tag="VHX39_20605"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX3993579.1"
                     /translation="RHVLAGQSDNFTVQDLQEISKTIASTTAILTAFLAAVAAVSLLV
                     GGIGIMNVMLVSVTERTREIGIRLAIGARERDVLLQFLIEAVVMSGIGGIVGVTIGLL
                     GSAAVAALLKLQFILEPGVIVIAVLFSAAVGVGFGYFPARRAARLDPIEALRHE"
BASE COUNT          509 a          842 c          894 g          472 t
ORIGIN      
        1 atggaggcgt ccttcgcgat ggtcagcgcc accgcctgcg gcgtgtagag cctgatcttc
       61 aatgtgcggg cgcgggcatg agtcaatacc aacacggctt tcattcgctt gcgcgccgcg
      121 gcgagctgcg cggcggtcag agtttccacc gcatacgcca tcacgatttc gcgaccgtcc
      181 cgcacgatga cgggcttgcc cgcgcgcagg gcgctcacgg cgcgctccac cggccccgca
      241 gtcgttgcgg accggcattg gcggcgcgag ggctttgatt tacctctgcg gggcttttgt
      301 cttggcttgg gggccatgaa ccccacatac accggcggga cgaaaccggg tagagttccg
      361 tggcagcttc gccatgccgc cgacagggat taaatatgcc aagtgccaag cgggttcttc
      421 tggtcgatga cgacaccatg ctgagcggct cgctggccga acagcttgcg gccgagggtg
      481 actatgcgcc ggtcgaagcc ggctccgtgg cggaaggccg ccagaaggcg cgcgacggtc
      541 tttacgaatt catgatcctg gatgtgagcc tgccggatgg cgacggccga aagctgtgcc
      601 gcgccctgcg cgacgacggc atcacctgtc cgatcgttct gctcaccgcc gccgacagcg
      661 acgccgacac catcgaggga ctcgatgccg gtgcgaacga ctacatcacc aagccgttcc
      721 gcttcgccgt cctgatggcg cgcatccacg cgcacttgcg caaccacgaa cagagcgagg
      781 aagcgatcta ccgcatcggg ccatacacgt tccggcccag cgcgaaactt cttctggatt
      841 cgcaggacaa gaaaatccgc ctgacggaaa aggaaaccaa catcctgaag ttcctctatc
      901 gctccggcga cacggtggcg cgcgagactc ttctgcacga agtctggggc tataatccgg
      961 cggtgacgac gcatacgctg gagacccaca tctaccggct gcgccagaag atcgaaaaca
     1021 accccggaca ggcgcagatc ctggtgaccg aaagcggcgg ctaccggctc gtcgcctgag
     1081 ttttccgccg gtaggtcact agtttgttcc ccctcgcgga gggcatcccc gccttgtaaa
     1141 aataccgttc tgtgcccacc agtggggaca gcctatctgt cttggtgagg cgggggccaa
     1201 ggagtagtgc gatgcagagc aggacgaaat ctttcatggg cggggcggca atcgccgctt
     1261 tcctgataac ggcgggcggc gccgatgccg gccaggacca aagctggttc cagcaaccgg
     1321 cgcagaattt caacgtccat gccgtcgcgc tggatcatgt gatcgcggac gtcgtcatca
     1381 tggtgaaaga cggcggtccg gcgagttatg cggtgcaggg accgcgttat ctcgtcaacg
     1441 ccatgcacgc gcaggcgacg ggtggcgtgc tgaccatcgc cggtccgcag catcagggcg
     1501 gccacagcgt caacgtctgg gactggtcga agtggttcga ctattcggat gtgaatcagg
     1561 gccacatgaa ggtcacgctg tcggtgccac gcggcagcga catcagcacg cgccacatga
     1621 tcggcgacat caccgcgggc gatacggacg gtcatctgtc cgtcgaaacc atttcgggtg
     1681 acgtcaggat cggtcgtgtc accgacgcga aggtcaagat cgtgggcggc ggcgatgtca
     1741 gcatcgcttc cgtgcgggat tcggttcagg ccgatgtgtc aggctcgggc gatgtgaaga
     1801 tcggcaatat cggcggcgcg gcctccgtca cggtggccgg ttccggcgac acctcgctgg
     1861 gcaatgtcgg ttcggcggtg aatgtgaaca tcgccgggtc aggcgatctg aatgtgggaa
     1921 cggtcaacgg accggtgacg gtgtcactgg ccggcgcggg cgatgtgcat atcgcgaacg
     1981 gcaaggccga tccgctgaag gtttcgatgg tgggcggcgg cgatttctcg ttcggcggca
     2041 tggccgtcaa tcccacgatc agcgcgatgg gctcggggga tgtgtggatg cgtggctata
     2101 ccggacatct gagcaccagc ggcatggccg atgtgcatgt cggggaccgc gacgatgacg
     2161 gtcaccacca ctggcatctg cctgcgattc cggttccgcc cgcgcctccc gcaccgcctg
     2221 cgccgccaca cggcggctga caaggattac tcgtgccgga gcgcctcgat gggatcgagg
     2281 cgcgcggcgc gccgggcagg aaagtatccg aagccgacgc cgacggcggc cgaaaacaga
     2341 accgcgatca cgatcacgcc cggctccaga atgaactgga gcttcagcag tgcggcgacc
     2401 gctgccgatc ccagcaggcc gatggtcacg ccgacgatgc cgccgatgcc gctcatcacc
     2461 acggcctcga tcaaaaactg cagcagcacg tcgcgctcgc gtgcgccgat ggcaaggcga
     2521 attccgatct cgcgcgttcg ttcggtgacc gataccagca tcacgttcat aatgccgatg
     2581 ccgccgacca gaaggctgac ggccgcgacg gccgccagga acgcggtgag aatcgcggtg
     2641 gtggatgcta tggtcttgct gatctcctgc agatcctgaa cggtgaaatt atcgctctgt
     2701 ccggcgagga cgtggcg
//
LOCUS       DATAVD010001078         2293 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1405155, whole genome shotgun sequence.
ACCESSION   DATAVD010001078 DATAVD010000000
VERSION     DATAVD010001078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2293
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1405155"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..881)
                     /locus_tag="VHX39_20610"
     CDS             complement(<1..881)
                     /locus_tag="VHX39_20610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008942967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3993580.1"
                     /translation="MSHTTIDEFSTRALPMATELPAAPAPGYWKSVGQRLSRDPVTIA
                     VTLVLLCILFITLGAPLVSHGDPYTGSVLARLKPIGTPGHWLGTDETGRDLWTRLCYG
                     GRLSLLAAVLPVTISLLVGGFLGILAGYLGGIVGTLIMRTMDVFYAFPSILLAIAICG
                     MLGNGLSNSILALAVVFIPPMVRVSETVTTQARHLDFVEAARASGTTTLQVIRYHVLA
                     NVLGPILVYATSLISVSIILSAGLSFLGLGVTPPQAEWGLMLNSLRQAIYVQPYVAAL
                     PGLMIFITSMCFNLMSDG"
     gene            complement(896..1834)
                     /locus_tag="VHX39_20615"
     CDS             complement(896..1834)
                     /locus_tag="VHX39_20615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3993581.1"
                     /translation="MLVFAIRRLLQAIPILLGVSLVVFGLVHIVPGNPIDMLMPPEAS
                     PEVIAQMKAAFGFDKPLYMQYLLWLLRALHGDFGVSVFNASPVWGQLITALGNTFILA
                     IFGALLGFSLGIITGMIAALHHGRWPDKLFSAIATTGVSLPHYWCAIVLVLACAVLHD
                     WLPAQGMGDDSLPLWDRLQYLVLPVITLSLIPMGVIGRLVRATVLEILGQDFVGALSA
                     KGLTRWPVIRHICKNAAPPVLALMGLQFGYLLGGSILVETVFNWPGSGNLLNLAIFRR
                     DIPVLQATILVLATFFVILNLVVDIAQAAIDPRMRR"
     gene            2023..>2293
                     /locus_tag="VHX39_20620"
     CDS             2023..>2293
                     /locus_tag="VHX39_20620"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HEX3993582.1"
                     /translation="MHETAINREVVRRVTERRGGLRVFDSIDCKRTAHIIVDLQNGFM
                     APGQVAEIATARDIVPNVNRISDAVRQAGGLVVYIQNTFDDIAVRT"
BASE COUNT          557 a          698 c          671 g          367 t
ORIGIN      
        1 ccgtcgctca ttaaattgaa acacatcgag gtgatgaaga tcatcaggcc gggcagggcg
       61 gcaacataag gttgcacgta aatcgcctga cgcagcgaat tcagcatcaa cccccattcc
      121 gcttgcggcg gtgtaacccc aaggcccagg aaggaaagac cggcagagag gatgatcgat
      181 acgctgatca ggctggtcgc ataaaccagg atcggtccga gtacgttggc cagaacgtga
      241 taacgtatga cctgcaacgt ggtggtgccg gaggcccgcg ctgcctcgac gaagtcaagg
      301 tgcctcgcct gagtggtcac ggtttccgat acgcgcacca tgggtggaat gaacaccacg
      361 gccagcgcca ggatggaatt gctaaggccg ttgcccagca tgccgcaaat tgcaatggcc
      421 agcaaaatcg acggaaatgc gtagaacaca tccatcgtgc gcatgatcag tgtgccgacg
      481 ataccgccca aatatccggc gaggatgccg agaaagccgc ccaccagcag cgaaatggtc
      541 accggcagca ccgccgccag cagcgacaac cggcccccgt aacacagtct tgtccaaaga
      601 tcccggcctg tctcgtcggt gccgagccaa tgacctggtg tgccgatcgg cttaaggcgc
      661 gccaacacgc taccggtata aggatcgcca tgcgagacca aaggtgcgcc caaggtaatg
      721 aacagaatgc aaagcagcac cagcgtgacg gcgatggtca ccggatcgcg tgacaatctt
      781 tggccgacgg acttccagta gcccggcgcc ggcgcggccg gcagctcggt ggccatcggt
      841 aatgcgcgtg tggagaattc atcaatggtg gtgtgagaca tccggacctc ccggcctacc
      901 ggcgcatgcg tggatcgatc gccgcctgag cgatgtcgac cactaaattc aggatgacga
      961 agaatgttgc caataccagg atcgtcgcct gcagaaccgg gatatcgcgg cgaaaaatcg
     1021 ccaggttgag caggttgccc gagccgggcc aattgaacac cgtctccacc aggatcgagc
     1081 cgccgagcag atagccgaat tgcagcccca tcaacgccaa caccggcggg gccgcgttct
     1141 tgcaaatatg ccgaataacc ggccaccgtg tgaggccctt ggccgacagc gcaccgacaa
     1201 agtcctgacc aaggatttcc agcacggttg cccgcacaag ccggccaata acgcccatgg
     1261 ggatcagcga aagtgtaatg accggcagaa ccagatactg cagccgatcc cacaacggca
     1321 acgaatcatc tcccatcccc tgggccggca accagtcgtg cagcaccgca cacgccagca
     1381 ccagcacgat ggcgcaccag taatgcggca gcgaaacccc cgtggtcgcg atggcggaga
     1441 acagcttgtc gggccaccgg ccgtgatgca gcgcggcaat catcccggtg atgatcccca
     1501 ggctgaatcc aagcagcgcg ccgaaaatcg ccagaatgaa ggtattgccc agtgcggtga
     1561 tgagttggcc ccagaccggg ctggcattga acacggacac gccgaagtcg ccgtgcaagg
     1621 cacgcagcag ccaaagcagg tactgcatgt aaagcggctt atcgaagccg aatgccgctt
     1681 tcatctgcgc gatgacctct ggcgaggcct cgggcggcat cagcatgtcg atcggattgc
     1741 cgggaacgat atgcaccaga ccgaacacga ccaaagaaac cccgagcagg atcgggattg
     1801 cctggagcaa ccttcgaatg gcaaaaacca gcatgtcggc gtggggctcc ctgatccggc
     1861 gtgcttacgc tgcaccgcag caatgcgtcc gaagctaaca catctccccg cgctgtccag
     1921 agcaaaatag cctaaatccc gtccacttgt ctcccaaccg agcgagtgcc aggctcagtg
     1981 cgatgggatt gatcaaactc agagcaattt ggagggctgg ccatgcatga aaccgcaatc
     2041 aaccgtgagg tcgtgcgccg tgtaaccgag cggcgagggg gcttgcgtgt atttgacagc
     2101 atagattgta agcggactgc ccatattata gtcgacctgc aaaacggctt tatggcgccg
     2161 ggccaggttg ccgagatcgc cacggccagg gacatcgttc ccaatgtcaa ccggatcagc
     2221 gatgccgtcc gccaggccgg cggtctggtc gtctacatcc agaacacctt cgacgatatc
     2281 gcagtccgga cat
//
LOCUS       DATAVD010001079         1788 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_851334, whole genome shotgun sequence.
ACCESSION   DATAVD010001079 DATAVD010000000
VERSION     DATAVD010001079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_851334"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(28..279)
                     /locus_tag="VHX39_20625"
     CDS             complement(28..279)
                     /locus_tag="VHX39_20625"
                     /inference="COORDINATES: protein motif:HMM:NF019324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapB family
                     antitoxin"
                     /protein_id="HEX3993583.1"
                     /translation="MALSIKTAEADELARSLARLTGESMTEAVTAALRERLARERARR
                     EAASSLPARLTALSSQLRVAYDTRPVSRQEWDAAAGDDR"
     gene            complement(471..1034)
                     /locus_tag="VHX39_20630"
     CDS             complement(471..1034)
                     /locus_tag="VHX39_20630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015074637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEX3993584.1"
                     /translation="MNGVRTRFTVPQRLLHWLMAVCILAMLFIGVGMVSTVTPKYLTL
                     VSIHKPLGAAILVLALIRLVVRLCYGAPPLPADLPAPMKLAAYLSHLAFYGLMIGMPL
                     LGWGMLSAAGYPVVLFGGVHLPAILPHSDRLHALLWDAHFYLAFAFFGLILVHAAAAL
                     FHGLIRRDGVFEAMASVSVRDGVAPTE"
     gene            complement(1031..>1788)
                     /locus_tag="VHX39_20635"
     CDS             complement(1031..>1788)
                     /locus_tag="VHX39_20635"
                     /inference="COORDINATES: protein motif:HMM:NF012425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="catalase family peroxidase"
                     /protein_id="HEX3993585.1"
                     /translation="NLATPDPNAADATVRVRGFGLRISTPDGQEWRMAMIDAPFFVVS
                     TPQAFYQLLLASGSKDPNAMKTLVGAHPEIAAFGGWAKSAPWTGSYAEERFNSLDSFI
                     FTDGSGAAHAVRWSLVPAAQVVPVSPADLGKRGPNFLEQEITERVRTAPQRWAMVVTV
                     ANPGDPTADPSKAWPDDRRTVEVGTLTVQRIEAEPDGPCRDINFDPTVLPAGMRTSDD
                     PFPAARSSAYAKSFDRRTAEAQDYPRTTTGAKP"
BASE COUNT          351 a          643 c          530 g          264 t
ORIGIN      
        1 ccaccacggc cgaggaatcg acgacaatca ccggtcgtcg ccggccgccg cgtcccattc
       61 ctgccggctg accggccgcg tatcgtaagc gacacgcaat tggctggaca acgcggtcag
      121 tcgcgccgga agactggaag ctgcctcacg ccgagcgcgc tcacgcgcca gacgctcgcg
      181 caacgcggcg gtgacggctt cggtcatgct ttctccggtc agtcgcgcga ggctgcgagc
      241 caattcatct gcttccgccg tcttgatact cagcgccatg gatgctcctt tctagacaca
      301 ccgtctagat agtgctcgca atgccacttt gccatattgc atccggaatg ccgcgccgta
      361 ccctgccgca ccggagaagg gatagggcaa cgtgatgccg accacgacac cggccttgcc
      421 cggatatagg cgggcccgga cagcaccttg cacatagctc agcccgcccg tcactcggtc
      481 ggcgcgaccc cgtcacgaac cgacacggat gccatcgcct cgaacacgcc gtcacgccgg
      541 atcagcccat gaaacagcgc cgccgcggca tgcaccagga tcaggccgaa gaacgcaaaa
      601 gccagataga aatgcgcgtc ccacagcagc gcatgcaaac ggtcgctgtg cggcaggatc
      661 gccggcagat gcacgccccc gaacagcacc accgggtacc ccgccgccga cagcatcccc
      721 cagccgagca gcggcatgcc gatcatcagc ccatagaacg ccaaatgcga cagataggcc
      781 gccagcttca tcggcgccgg cagatcggcc ggcagcggcg gcgcgccata gcacagacgc
      841 accaccagcc ggatcagcgc cagcaccaga atagcggcac ccagcggttt gtggatcgaa
      901 acgagcgtca gatatttcgg cgtcaccgtg gacaccatgc ccacgccaat gaacaacatg
      961 gccaggatgc agaccgccat cagccagtgc agcaggcgct gcggcacggt gaaccgtgtg
     1021 cgaaccccgt tcacggcttg gctcccgtcg tcgtgcgagg atagtcctgc gcctctgccg
     1081 tccgacggtc aaacgacttc gcataggccg acgaacgggc agccgggaac gggtcgtccg
     1141 atgtccgcat cccggccggc agcacggtcg gatcgaagtt gatatcccgg caaggtccat
     1201 ccggttcggc ctcgatccgc tggaccgtca gcgtaccgac ctcgaccgtg cgacgatcgt
     1261 ccggccacgc cttgctcgga tcagcggtcg gatcgccggg attggccacg gtaaccacca
     1321 tcgcccagcg ctgcggcgcg gttcggaccc gttcggtgat ctcctgctcc aggaaattcg
     1381 ggccacgctt ccccagatcg gccggcgaga ccggaaccac ctgcgccgcc ggcaccagcg
     1441 accatcgcac cgcgtgcgcc gcaccggaac cgtcggtgaa gatgaagctg tcgaggctgt
     1501 tgaaccgctc ctccgcataa ctgccggtcc acggggcgct cttggcccag ccgccgaacg
     1561 ccgcgatctc gggatgcgcg ccgacaagtg tcttcatcgc gttcggatcc ttgctccccg
     1621 aggcgagcag cagttgataa aatgcctgcg gcgtcgacac cacgaagaat ggcgcatcga
     1681 tcatcgccat gcgccattcc tgcccatccg gcgtcgaaat ccgcaatccg aagccgcgca
     1741 cccgcaccgt tgcatccgcc gcgttcggat caggcgtggc aaggttga
//
LOCUS       DATAVD010001080         2856 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1405409, whole genome shotgun sequence.
ACCESSION   DATAVD010001080 DATAVD010000000
VERSION     DATAVD010001080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2856
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1405409"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..381)
                     /locus_tag="VHX39_20640"
     CDS             complement(<1..381)
                     /locus_tag="VHX39_20640"
                     /inference="COORDINATES: protein motif:HMM:NF020157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1761 domain-containing protein"
                     /protein_id="HEX3993586.1"
                     /translation="MHGFDVNWLAVFAAALAKFVIGGVWYSPPVFGPRWGALVGVTLD
                     AFKARMGAAMITDLAASVVAAWVLANVLKFTGAVGLIPGARVSFFLWLGFVATPLLST
                     TVYEGRPIALFAINAGYWLIAMLIM"
     gene            419..829
                     /locus_tag="VHX39_20645"
     CDS             419..829
                     /locus_tag="VHX39_20645"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX3993587.1"
                     /translation="MASEEAEKNAIRELLATYCFHLDNYRFADMAALFTEDGTWDTAF
                     GKGTGRAGIVAQAESIGTAGARPRRVHLTTNIVIALNGDTATVQSNWTVIQNSANGPK
                     IGSGGAYQDQVVKQDGKWLFRYRKIDRFLAEGLM"
     gene            981..1310
                     /locus_tag="VHX39_20650"
     CDS             981..1310
                     /locus_tag="VHX39_20650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993588.1"
                     /translation="MSAVPFDTLKFARHLEASGMAAPVAAGAAEAFADALTGADLVTK
                     GDLAETTRELRTEIAAVRTEITATRTELKNDIELLRRDITIKFGSMLVIAVGILLTAI
                     RYLPPHP"
     gene            1420..>2856
                     /locus_tag="VHX39_20655"
     CDS             1420..>2856
                     /locus_tag="VHX39_20655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HEX3993589.1"
                     /translation="MNGAESLVHSLLKSGVDTCFSNPGTSEMHFVAALDRVPGMRCVL
                     GLFEGVVTGAADGYARVTGKPAATLLHCGPGLANGLANLHNARRAATPIVNIVGDHAT
                     YHRPLDAPLTADTEGWARGVSGWVRTAMDVKTVGRDAAAAVQAAMIAPGQIATLILPS
                     DTSWNEGGIPAEALPRVPTPLASPNQIEEAAGILRRGGGGIVLLLGGEALSAEGLGLA
                     HRIAAATGCRLVAQGSNAKIARGQGRVSLDRVPYVVDVAVKAMAGTKQLLLCGARKPV
                     TFFAYPNKPQTSIPDDAEIHILARPEQDLVDALSRLADMLHAPKVAPPDNGPVHEVGR
                     GPLTPESVASTVGALMPEGAIIADESVTYGRGFFANTKAAPHHDWLNVTGGAIGGGMP
                     MATGAAIGAPGRRVINLQADGSAMYTVQSLWTQAREKLDVTTVLLSNRKYQILIGELA
                     NVGANPGRTAMDMLDLGNPDLDWPKLANG"
BASE COUNT          573 a          870 c          923 g          490 t
ORIGIN      
        1 cataatcagc attgcaatca gccaataacc ggcgttgatg gcaaacagcg cgattggcct
       61 gccttcatag accgtcgtcg aaagcagcgg tgttgcgacg aaaccaagcc acagaaagaa
      121 cgacacgcgc gcccccggta tcaagccgac cgcaccggtg aatttcaaca cattcgccag
      181 aacccaggcc gccacgacgc tcgccgcgag gtcggtgatc atcgccgctc ccatccgagc
      241 cttgaatgca tccagcgtca caccaacgag agcaccccaa cgcggaccga ataccggagg
      301 cgagtaccaa actccgccga tgacaaattt tgccaatgcc gcagcaaata ccgccagcca
      361 gttgacgtcg aacccgtgca tagtacgctc ccccgacact gccgcacggg aggatagcat
      421 ggcgagtgaa gaagccgaaa agaacgcaat tcgcgaattg ctggcgacgt attgcttcca
      481 cctcgacaat tatcgctttg ccgatatggc ggcgctgttt accgaggacg gtacatggga
      541 cacggcgttc ggcaaaggca ccgggcgtgc tggtatcgtt gcccaggcgg agtcgattgg
      601 cacggcgggg gcgcggccga ggcgggtgca cctgacgaca aacatcgtga ttgcgctgaa
      661 cggcgatacc gcgaccgtgc agtcgaactg gacggtcatc cagaacagcg ccaacggccc
      721 gaaaatcggc tcgggcggtg cgtatcagga tcaggtcgtg aagcaagacg gcaaatggtt
      781 gttccgctat cgcaagatcg accggttcct ggcggagggg ctgatgtaga caccgcgttg
      841 ccgctcggca tcgagcggct ccggcgatgg tgtcagaggc ttttgaacgc aatggcgtgc
      901 gcgttttgct tcggacgtta atggtttcgc aattcagcga tgctggactg gcgctgtctg
      961 accggagtaa ggcagtgatc atgagtgcgg ttccatttga cacactgaaa tttgcgcgtc
     1021 acctcgaggc gtcagggatg gctgctccgg tcgctgccgg cgcagcggaa gcgttcgcag
     1081 atgcgttaac cggtgccgac ctggtgacca agggcgacct ggcagagacc acacgcgagc
     1141 tcaggaccga gatcgcggcc gtcagaaccg agatcaccgc aaccaggacc gagctcaaaa
     1201 acgacatcga actgctacgg cgagacatca cgatcaaatt cggcagcatg ctggtgatcg
     1261 ccgtgggaat cctgttgacc gcaatccgct atctgccgcc gcatccgtag tcggttcctg
     1321 ctgcagcccg cacaaagcct gctgcaccaa cggcccagac ccgtagccag acggaacgga
     1381 accggataac tctgcgctga caatgcggag accaccatca tgaatggcgc cgaaagtctg
     1441 gtgcactcac tgctgaaaag cggcgtcgat acctgttttt ccaatcccgg cacgtcggag
     1501 atgcacttcg ttgccgcact cgaccgagtg cccggcatgc gttgcgtgct tggcctgttt
     1561 gaaggtgtgg tgaccggcgc cgccgatggt tacgcccgtg tcacgggcaa accggcggcg
     1621 acgctgttgc attgtggacc cggcctcgcc aatgggctgg cgaatttgca caacgcccgc
     1681 cgcgcggcaa cgccgatcgt caatatcgtt ggcgatcacg cgacctatca ccgcccgctc
     1741 gatgcgccgt tgacggccga caccgagggt tgggcgcgcg gcgtctccgg ttgggtgcgc
     1801 acggcgatgg acgtgaagac cgtgggccgc gatgccgccg ccgcggtgca ggccgcgatg
     1861 atcgccccgg gccagatcgc cacgctgatc ctgccgtccg acacgtcctg gaacgaaggc
     1921 ggcatcccgg ccgaggcgct gcctcgtgtg ccaacgcccc tcgcctcacc caatcagatc
     1981 gaggaagccg ccggcatcct acggcgcggc ggtggtggga tcgtgctgct gctgggtggc
     2041 gaggcgttgt cggccgaagg tttgggtctg gcacatcgta tcgccgccgc aaccggctgc
     2101 cggctggtgg cgcaagggtc gaacgcgaag attgcgcgcg gtcaggggcg ggtgtcgctc
     2161 gaccgggtgc cgtatgtcgt cgatgtcgcg gtcaaagcca tggcgggcac gaaacaattg
     2221 ctgctgtgcg gcgcgcgcaa accggtgacg ttctttgctt atccgaacaa accgcagacc
     2281 tcgattccgg acgatgcaga aatccacata ttggcacggc cggagcagga tctggtcgac
     2341 gctctgagcc ggctggccga catgctgcac gcacctaaag tggcgccgcc ggacaacggc
     2401 ccagtacatg aggtggggag aggcccgctg accccggaat cggtggcctc cacggttggc
     2461 gcgctgatgc cggagggtgc gatcatcgcc gacgagtcgg tcacttatgg ccgcgggttc
     2521 tttgccaata cgaaagccgc gccgcatcac gattggctga acgtgaccgg tggcgcgatc
     2581 ggcggcggca tgccgatggc caccggtgcc gcaatcggtg cccctggacg gcgggtgatc
     2641 aatctgcagg cggatggctc ggcgatgtat accgtgcagt cgttgtggac ccaggcgcgc
     2701 gagaagctgg acgtcaccac ggtgttgttg tcgaacagga aataccaaat tctgattggc
     2761 gaactggcca atgtcggcgc caatcctggg cggaccgcga tggacatgct ggatctgggc
     2821 aatcctgatc tggactggcc gaagctggcg aacggc
//
LOCUS       DATAVD010001081         4162 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3080134, whole genome shotgun sequence.
ACCESSION   DATAVD010001081 DATAVD010000000
VERSION     DATAVD010001081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4162
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3080134"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..794
                     /gene="hypD"
                     /locus_tag="VHX39_20660"
     CDS             <1..794
                     /gene="hypD"
                     /locus_tag="VHX39_20660"
                     /inference="COORDINATES: protein motif:HMM:TIGR00075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HEX3993590.1"
                     /translation="ARGADVRMVYSPLDALTIARETPDRQVVFFAIGFETTAPATAMT
                     LAQAMRDRVENFSLLAAHVLVPPAIEALLSAPDNQVQGFLAAGHVCTVMGYWQYEPIA
                     SRYNVPIVVTGFEPIDLLQGIYQCIRQLEAGRAEVENPYGRFVRREGNRTAQNLMGQV
                     FAVRSQRWRGMGEIADSGLGVAPEYARFDAYRRFGYTPDAPERPTECLSGEVLRGLRR
                     PVECPAFGTRCTPERPLGATMVSSEGACAAYYRYRRPATAVPESV"
     gene            791..1837
                     /gene="hypE"
                     /locus_tag="VHX39_20665"
     CDS             791..1837
                     /gene="hypE"
                     /locus_tag="VHX39_20665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HEX3993591.1"
                     /translation="MTNGFALSCPVPDAGGDIVEIAHGGGGLLMHRLIDRVIRPAFGL
                     PEGGVAHDGAVFEIGGSRLAFTTDSYVVRPLFFPGGDIGSLAVNGTVNDLAMCGAQPL
                     YLSVGLILEEGLPIAQLRRVVASMRQAADAAGVRLVTGDTKVVERGKGDGIYVNTAGV
                     GAVRPGVAVEPRRVRPGDAVLLSGDIGRHGIAVMAAREGFGFEGDIASDCAPLAATVM
                     RLIDADIELHCLRDPTRGGLATTLVEIATAGEVTIRIDEASIVISEPVRGACELLGLD
                     PLYVANEGCFVAFVPQHAAASALAVLREGAGGTRAAIIGRVEAAGRAVLLDGVIGGTR
                     ALDMLSGEQLPRIC"
     gene            complement(2176..2862)
                     /locus_tag="VHX39_20670"
     CDS             complement(2176..2862)
                     /locus_tag="VHX39_20670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993592.1"
                     /translation="MGVFLSVMAGLAVGQAWAGPLFLTITITDGLGTSQQQFNDGGTG
                     IISLPATTIEGVSITGEFAQQIVDGTNVLISSATTITNNSGSVATTSAVVSGGGYVGP
                     NSVVSLSGSGTWLHTAGSTITQTWYNDPTNVIGANPTNTPGNLVGTFTDTAVGLTSSF
                     AFSPPDTLLAVPDMGLFSMTEAWNYTLAVGGSLTSRGQDEVTTVPEPFSLAVLGFGLI
                     ALGAVRSRHG"
     gene            complement(3791..4087)
                     /locus_tag="VHX39_20675"
                     /pseudo
     CDS             complement(3791..4087)
                     /locus_tag="VHX39_20675"
                     /inference="COORDINATES: protein motif:HMM:NF021438.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2147 domain-containing protein"
BASE COUNT          766 a         1215 c         1326 g          855 t
ORIGIN      
        1 aggcgcgcgg cgcggatgtg cggatggtct actcgccgct cgatgcgctg accatcgcgc
       61 gggaaacgcc agatcgccag gtcgtgttct ttgcgatcgg ttttgagacc actgcgccgg
      121 cgacggcgat gacgctggcg caggcgatgc gcgacagggt cgagaatttt tcgctgttgg
      181 cagcgcacgt gctggtgccg ccggcaatcg aggcattgct gagcgcgccg gacaatcagg
      241 tgcaaggttt ccttgcggcc ggccacgtgt gcaccgtcat gggttactgg cagtacgaac
      301 caatcgcttc ccgttacaac gtgccgattg ttgtgaccgg gttcgaaccg atcgatttgc
      361 tgcagggaat ttaccaatgc atcaggcaac ttgaggcagg ccgcgcggag gtggaaaacc
      421 cctatgggcg atttgttcgc cgcgaaggta accgcacggc ccagaacctg atgggccagg
      481 tttttgcggt tcgctcgcag cgctggcgtg gaatgggcga aattgctgac agcggtctgg
      541 gagtggcgcc ggagtatgcg cgctttgatg cctaccgacg atttggctat acaccggatg
      601 cgccggaacg tccgaccgaa tgtctctcgg gtgaggtgtt gcgcggcctt cgcaggccgg
      661 ttgaatgtcc tgcgtttggc acacgctgta cgcccgaacg gccgctcggt gcgacgatgg
      721 tctcgtcgga gggcgcctgt gctgcctact accggtatcg ccgtccggcc accgcagtcc
      781 ccgagtcggt atgaccaacg ggtttgctct gtcgtgcccg gtccccgatg ccggcggcga
      841 tattgttgaa atcgcccatg gtggcggcgg attgctgatg caccgactga tcgatcgagt
      901 cattcgcccg gcgttcgggc tgccggaggg cggcgtcgcg catgacgggg cagtgtttga
      961 aattggcggt tcccggctgg catttacgac cgattcctat gtggtacgac cgctgttctt
     1021 tcccggtggc gacatcggtt cgctcgcggt caacggcaca gtcaatgacc tggcaatgtg
     1081 tggcgctcag ccgctgtatt tgagtgttgg actgatcctc gaagaggggt tgccgatcgc
     1141 acaactgcga cgagttgtcg catcgatgcg gcaggcagcc gacgccgccg gtgtccggct
     1201 ggttaccggc gataccaagg tcgtcgagcg aggcaagggg gatggaattt acgtcaacac
     1261 tgcgggcgta ggtgccgtcc gcccaggtgt cgcagttgag ccgcggcggg tgcgaccggg
     1321 cgacgcagtg ttattgagtg gcgacatcgg ccgccatggt atcgccgtga tggcggctcg
     1381 tgaaggattt ggtttcgagg gtgacattgc cagcgactgt gcgccgcttg ccgctacggt
     1441 gatgcggctg atcgatgccg acatcgaact gcattgcctg cgcgacccga cgcgcggggg
     1501 cctggccaca accctggtgg agattgccac ggctggcgag gtaactattc gtatcgacga
     1561 agcatctatc gtgatttctg agccggtgcg gggcgcgtgc gaattgcttg gcctcgatcc
     1621 cctgtatgtt gcaaatgaag gctgcttcgt ggcgttcgtc ccgcagcatg ccgcggcgtc
     1681 ggcattggcc gtgctgcggg aaggggccgg cgggacccgc gcagcgatta tcgggcgggt
     1741 ggaggcagcg ggccgcgccg tattgctcga cggtgtgatc ggcggcacga gggcattgga
     1801 tatgttaagc ggggaacaac tgccgcgtat ctgctgaggc gtgaggcgcg tcgacagcat
     1861 tgtcacgtta acccgatctg gcgtgggaag ccgggcccgg caaaactgac ggcatgaaac
     1921 cactgtgcga ccccattacc gccatcgctt cccggccgag atcatcagcc atgcggtctg
     1981 gctatatcat ggggtgcaag gtgaacgtcc tgcgcaagtt gttgccgtgt gacatcccgc
     2041 ttgttgtgcc agcgatcagg gagttctgga tgccggaacg ggtgtgcgag gcgaacggtc
     2101 aacgctgacg gccgtgcggt tctcgcatcg gttaccctca gtcccaattg ctggcgactt
     2161 attcgcgggc gatgctcacc cgtgtcgact gcgcacggct cccagcgcga tcagcccgaa
     2221 gcccaggacc gcgaggctga agggttcggg gactgtcgta acttcgtcct gccccctgga
     2281 cgtcaggctg ccacctaccg cgagagtgta gttccacgct tcggtcatcg aaaagaggcc
     2341 catatccggc actgccagca gcgtgtctgg cggcgaaaac gcaaatgaac tcgtgaggcc
     2401 aacggcggta tccgtgaacg tgcctaccag gttgccgggc gtgttcgttg ggttcgcacc
     2461 gatcacattg gtgggatcgt tgtaccaggt ctgtgtgatc gtggatccgg cggtatggag
     2521 ccaggttccc gatccggaca gtgagacgac agagttcggc ccaacataac cgccacctga
     2581 aaccacggct gacgtcgtgg cgaccgaccc ggaattattg gttatcgtcg tcgcacttga
     2641 tatcaaaacg tttgtcccat caacgatctg ctgggcgaac tcgccggtga tgctgacgcc
     2701 ttcgattgtc gttgcgggca gggatatgat gccggtgccc ccgtcgttga attgctgttg
     2761 ggacgttccc aaaccatcgg tgatggtgat ggtcaaaaac agtggccccg cccacgcttg
     2821 tccgacagcg agccccgcca tgaccgacag gaaaaccccc acaccaacgg tccgttgcgc
     2881 gaaacggcgc cgacgaggga gtgagcaccg aaacacggtc cgcgttcccg gctgaatgac
     2941 gtttgtaaga ggacgctgaa acataggaac attccgttag ttgggcacta tgcacagagc
     3001 aatctgtatg ccaactgaaa ttgtgcagcg caatgaagcg cttatggtta tggtgccgtc
     3061 aaataacacc agaagtgtaa agtactccga ctcaatcctt catccgcctg cgggtgatcc
     3121 gtggtcgacg ggatgggcgg accattatcc cggcggcgtt aacggatggg caaccttttg
     3181 agcgcagtgt cctggatatc ggccgtggct tcgcccacgg atgggcattg tcacgttaac
     3241 ccgatctggc gtgggaagcc gggcccggca aaactgacgg catgaaacca ctgtgcgacc
     3301 cccattaccg ccatcgcttc ccggccgaga tcatcagccg tgcggtctgg ccatatcttg
     3361 tgttcagcct gagcttccgg aacaacgttt caaatcaccc ctgcaggctc agaatttcct
     3421 ttcggtgcac ccgttcatcc acggtcactt ccatccacgc cgtcacctga tctcggccaa
     3481 catttatcgc gagattcgtt ccagggcttt cttaatttgg ccgcgggaga cgtgcgtcca
     3541 gtacgttgcg tgatcggcgc ggcatttgtg tgcacggctt caactcagcc agcagaagtt
     3601 aacgtgacaa tgcctccagc cgctatacgg gcgcgatggc atccgcatcg ttgtcagtcg
     3661 cggcggcggc cccatgccag ggaacagcta tggcgatcgc cggaaacgcg agagatgaca
     3721 aaaaaccgcg gcacccagcc aaggggaaat cgtgcctcat cgttgctctc cattccatgg
     3781 gattcggcat ctatgccagc ccgcaatcgg cggtcagatg tccggtgaac ggatgccata
     3841 tctgagtggc ttccagcagt tggatgccga taaagccccg caatcgcagg ttgccggctt
     3901 catccaacca cagctttgcc tgatacgtgc cgccatcacg cgggtcggta acttcgccga
     3961 gccacgtgcc gcccgcttcc ggcctctcat tcgtgatgat ggtaagtccg cattgcgaac
     4021 gaccggtcac ctccgtcggc atcgaatcgc cggacttacg atcgatccca acgatcctgc
     4081 cgcagagcgc gacaccgcat taggcgcttg cgatgacgcc atggccattc gccgtcgacc
     4141 aattgccgag cgggatacgg ct
//
LOCUS       DATAVD010001082         1871 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_851821, whole genome shotgun sequence.
ACCESSION   DATAVD010001082 DATAVD010000000
VERSION     DATAVD010001082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1871
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_851821"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..905
                     /gene="miaB"
                     /locus_tag="VHX39_20680"
     CDS             <1..905
                     /gene="miaB"
                     /locus_tag="VHX39_20680"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEX3993593.1"
                     /translation="FVSIMEGCSKYCSFCVVPYTRGEEISRPFEQVLEEVVRLAHQGV
                     REITLLGQNVNAYAGPMADGTPADLATLIHFVAAVDGVERIRFTTSHPLDFNDSLIEA
                     YANVAKLNNFLHLPVQSGSDRILAAMKRGHTVLEYKQKLRKLRAVRPDICISTDLIIG
                     FPGETDEDFVATMNLVAEVGFDQSFSFIYSRRPGTPAAALPDEVPHEVKQQRLELLQQ
                     RLNGQARAISQRMVGSRQRVLVERPAKRDPRQLAGRTDNNRWVNFDGPAEQPMSLINR
                     FADVIITEAMPNSLRGRLIADGAP"
     gene            935..>1871
                     /locus_tag="VHX39_20685"
     CDS             935..>1871
                     /locus_tag="VHX39_20685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012536226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEX3993594.1"
                     /translation="MTRDVLLAPADNVRLVELCGPLDGHLHQIEARLGVEVRRRGNRF
                     QIVGPSAAIQRAEAVLLGLYARAQREPVDSERVHIALQELDMDSNTIDANGDSDELKV
                     RTARGAVRARGANQTEYLNNVRTHDLTFGIGPAGTGKTYLAVACAVEALQSEKVRRIV
                     LVRPAVEAGERLGFLPGDLSQKVDPYLRPMYDALYEMLGFERVAKLIERNVIEVAPLA
                     FMRGRSLNDSFVILDEAQNTTNEQMKMFLTRIGFGSKAVVTGDITQVDLPNSKQSGLR
                     TVIDILNGVRGIAFTMFSSRDVVRHPLVQRIVQAYE"
BASE COUNT          350 a          577 c          594 g          350 t
ORIGIN      
        1 ccttcgtctc catcatggaa ggctgtagca agtattgcag cttctgcgtc gtgccctaca
       61 cgcgcggcga ggagatcagc cggcccttcg agcaggtgct cgaggaagtg gtgcgcctgg
      121 cccatcaagg ggtgcgcgag atcacgctgc tcggccaaaa cgtcaatgcc tatgccgggc
      181 ccatggccga cggcacgccg gcggatctgg cgacgctgat tcatttcgtc gcggcggtgg
      241 acggcgtgga gcgcattcgc ttcacgacct cgcatccgct cgacttcaac gacagcttga
      301 tcgaggccta cgccaacgtg gcgaagctca ataattttct gcacctgccg gtgcagagcg
      361 ggtcggaccg tattctggct gcaatgaagc gcggccatac tgtgctcgag tacaaacaga
      421 agttgcgcaa gctgcgggcg gtgcggccgg acatttgcat ctccacggat ctgatcatcg
      481 ggtttcccgg cgagacggat gaggatttcg tggcaaccat gaatctggtg gcggaagtgg
      541 gcttcgatca atcgttcagc ttcatctaca gccgccgtcc cgggactccg gccgcagccc
      601 tgccggatga ggtgcctcat gaggtcaaac aacaaaggct ggagctcttg cagcaacgct
      661 tgaatggcca agcccgggcg atctcccagc gcatggtggg cagccggcaa cgcgtgctgg
      721 tcgagcggcc cgccaagcgc gacccccgtc aactcgccgg ccgcaccgat aataatcgct
      781 gggtgaattt cgacggtccg gcggagcagc cgatgtctct catcaaccgc tttgcggatg
      841 tgatcattac cgaggccatg ccgaattccc tgcgcggccg tctcattgcc gatggggcgc
      901 cgtgagttca gttcccccgg tgagttcggt tccgatgacg cgcgacgttt tactcgctcc
      961 ggcggacaat gtccgattgg tggaactgtg cgggccgctc gacgggcacc tgcatcagat
     1021 cgaggccagg ctcggagtgg aagtcaggcg gcgcggcaac cgatttcaaa tcgtcggccc
     1081 gtccgctgcc atccagcgcg ccgaggcggt gctgctgggc ctttatgcgc gggcgcaacg
     1141 cgagcccgtg gattccgaac gcgtgcacat tgcgctgcaa gaactggata tggacagcaa
     1201 cactatcgat gccaatgggg attccgacga actcaaggtg cgtaccgcgc gcggtgcggt
     1261 gcgcgcccgc ggcgccaacc agaccgaata cctcaacaat gtccgtacgc atgatctgac
     1321 cttcggcata ggcccggcgg gcacgggaaa gacctacctg gccgtcgctt gcgcagtcga
     1381 ggcactgcag tcggagaagg tcaggcgcat cgtgctggtg cgcccggcgg tcgaagccgg
     1441 cgaacggctg ggatttcttc ccggcgacct gtcgcagaag gtcgatccgt acctgcgccc
     1501 catgtatgac gcgctgtacg aaatgctggg tttcgagcgg gtggccaaac tcatcgaacg
     1561 caatgtgatc gaagtggctc ccctggcctt catgcgcggc cgttcgctga acgattcgtt
     1621 cgtgatcctg gatgaggcgc agaacacgac caatgagcag atgaaaatgt tcctgacccg
     1681 catcggcttc ggctcgaagg cggtcgtcac gggcgacatc acgcaagtgg acctgccgaa
     1741 ctcgaagcag tcggggctgc gcacggtcat cgacattctc aacggggttc gcggcatcgc
     1801 cttcaccatg ttcagctccc gcgacgtcgt gcgccatccc ctggtgcaac gcattgtcca
     1861 ggcctacgaa g
//
LOCUS       DATAVD010001083         2171 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_851866, whole genome shotgun sequence.
ACCESSION   DATAVD010001083 DATAVD010000000
VERSION     DATAVD010001083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_851866"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(470..>2171)
                     /locus_tag="VHX39_20690"
     CDS             complement(470..>2171)
                     /locus_tag="VHX39_20690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993595.1"
                     /translation="VWTVDGGVEPIRVAARPVDAPASPEGTVSLTSLDGMPAPAAIAR
                     VGLDAPAPVSIEAASLAGGWQGQALTTVNGPVLPQARDIWLLGSPNGRATVRTLKLTG
                     VQTMIVPAGQVAQLTVIPSAAGHLAFWRAEGGFAQPGLGVAAGIARFSAIARADAPVT
                     LRNASDDGPLRVTLTRLDSTLLPARTVDASLQATLPPGTALPVTLPGGDKAVQLDLGS
                     GVAAFAGGSAAWAGAEPLSRTLSGAWTDILLVNTGSTAEPASLSWQPAPSSEPLRPGS
                     VIKRFFGAAGSFELPFDAPVDAHLVSAGDADLTAILPDGSVHRGRDVAVSGNGRAVVR
                     HGVGPIAVWLAAKGVSPWPKVAVQPVTSPVWLTLAGPAMALGLTQTAPSLLHVSTTAP
                     VLAALVQAGRADPPRLFPAGAELHVMLASGATELRLYSPTDGPLTGSLTLFTDPVTPI
                     AEGLGAPVSVAPGGSAVFGFTLAKATTIGVGVRADPDRATVRLLDATGVVLGQGVAQL
                     RALPAGQYLIEAHVPPDSVATILRPAVVGITPRGSGPPPEVAQHYLELVGLKPQGTTP
                     "
BASE COUNT          369 a          726 c          748 g          328 t
ORIGIN      
        1 ccgcttttca acacagagga agaatgagga cggcagagta ccgcagagag ggcaagaagg
       61 attgatttga ctgctcgaag cccggtcgtt ttgatattgg aagatttttt gtttgtgggc
      121 ttcgttccgg aggaggcagg cagtgtatcg gcttggtctc ggtggcaggt cgcgaaatca
      181 atgtcgcgat tggataggaa agcgtgtgtg gcgtcaccga tggaatgtgc ttcgcgcgta
      241 gcgcaatagc tttcttctct gtggaactcc gctgttctca ttctgcctct gtgttgaaaa
      301 acttgcttgc cgacgtccgg acatcccgga cctttcatgt cgggtaagtc acaagatagc
      361 gaccgaatcc ggccgagggc gtgttggctg ccaatgcccg gcgggaatgc tgccgcggac
      421 gctgcctcca tcaatgagga ccagggtgat gatggggctg gcaggcgtct catggtgtcg
      481 tcccctgggg tttcagcccg accagttcca gatagtgctg agcgacctcg ggcggcggtc
      541 cggacccgcg cggagtgatg ccgaccaccg ccggccgcag gatcgttgca acggagtcgg
      601 gcggcacatg cgcctcgatg aggtattgcc cggccggcag tgcacgcagt tgggccacgc
      661 cctgccccag caccacgccc gtggcatcga gcagccgcac cgtggcgcga tcggggtcag
      721 cccgcacgcc gacgccgatg gtggtggcct tggccagggt gaagccgaac acggcggaac
      781 cgccgggcgc cacgctgacc ggggcgccca ggccctcggc gatcggcgtc accggatcgg
      841 tgaacagcgt caggctgccg gtcaacggac cgtcggtcgg tgaatacagg cgtagttcgg
      901 tcgccccgga tgcgagcatg acgtgcaatt cggcgccagc ggggaacagg cgcggcgggt
      961 cggcccgtcc ggcctgcacc agggccgcca gaaccggggc ggtggtgctg acatgcagca
     1021 ggcttggcgc cgtctgggtc agtcccaacg ccatggcggg gccggccagg gtcagccaaa
     1081 ccggagacgt caccggctgg acagccactt taggccacgg cgacacaccc ttggcggcga
     1141 gccaaacagc gatcggcccg acaccatgcc gcaccaccgc acgtccgttg ccggacaccg
     1201 cgacgtccct gcctcggtgc accgaaccgt ccggcaaaat ggcggtcagg tccgcgtcgc
     1261 ctgcgctgac gagatgcgcg tcaaccggcg cgtcgaacgg cagctcgaac gacccggcgg
     1321 caccgaagaa ccgcttgatc acgctgccgg gccgcaaggg ttcggacgat ggcgcgggct
     1381 gccacgacag gcttgccggt tcggcggtgg agccggtgtt gaccagcagg atgtccgtcc
     1441 aggcaccgga cagcgtgcgg gacagcggtt cggcgcctgc ccacgcggcg gatccgccgg
     1501 cgaacgctgc cacacccgaa cccaggtcga gctggaccgc cttgtcgccg ccgggcagcg
     1561 tcaccggcag ggcggtgcct ggaggcaatg tcgcctgcag cgacgcatcc accgtgcgcg
     1621 cgggcagcag cgtcgagtcc agccgggtca gcgtcacccg cagcggtcca tcatcggacg
     1681 cattgcgcag cgtaaccggc gcatccgctc gggcgatggc actgaagcgg gcaatccccg
     1741 ccgccacgcc gagtccgggc tgcgcgaaac caccctcagc ccgccaaaat gcgagatgac
     1801 cagccgccga cggaatcaca gtgagctgcg ccacctgccc ggccggcacg atcatggtct
     1861 gcacgccggt caatttcagc gtcctcacgg tcgcccgtcc gttcggcgac ccgagcagcc
     1921 agatgtcgcg ggcttgcggc agcaccggcc cgttcaccgt cgtaagggcc tgcccttgcc
     1981 aaccgccggc cagcgatgcc gcctcgatgg acaccggcgc cggcgcatcc agcccgaccc
     2041 gggcgatcgc cgcgggtgca ggcatgccgt ccaggctggt cagcgatacg gtcccctcag
     2101 gtgaagccgg tgcgtcgacc ggacgggcgg cgacgcggat gggttcgacg ccgccatcca
     2161 ccgtccagac c
//
LOCUS       DATAVD010001084         5285 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2710663, whole genome shotgun sequence.
ACCESSION   DATAVD010001084 DATAVD010000000
VERSION     DATAVD010001084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5285
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2710663"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(151..307)
                     /gene="ssrS"
                     /locus_tag="VHX39_20695"
     ncRNA           complement(151..307)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="VHX39_20695"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(418..786)
                     /gene="zapA"
                     /locus_tag="VHX39_20700"
     CDS             complement(418..786)
                     /gene="zapA"
                     /locus_tag="VHX39_20700"
                     /inference="COORDINATES: protein motif:HMM:NF017016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEX3993596.1"
                     /translation="MAQVSLQINGYAYILGCADGEEEHLFTLAADLDRRIEEIKASTG
                     PGGEARLLLMAALMLSDELHDTREYLQHQQAGAAPAPRAEPRAGRRLRGLTKRAEAIA
                     DSAETLPLAAASDPAADPSS"
     gene            complement(854..1126)
                     /locus_tag="VHX39_20705"
     CDS             complement(854..1126)
                     /locus_tag="VHX39_20705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993597.1"
                     /translation="MAERTAPQETDGDGTEDMDAVANRLEAALERIAQNLDAARSAPP
                     SAELVARLDGLILRLRDILGSPPGMGSPPGMGGPPGMGGPPAPSRD"
     gene            1204..1650
                     /locus_tag="VHX39_20710"
     CDS             1204..1650
                     /locus_tag="VHX39_20710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993598.1"
                     /translation="MEHHPVVIVHSFGEAVAGLAEAQAIGRGVTLLSAPGAALYAGCG
                     WWRALVEAARAKYPDVPCTDVLDCADGTGQALAALRIGLTRLVLWPDAPGREAIVTIA
                     QSLGGFVLPAPPPAAAVMRPSHRPAEAKSGPRNEPSGNGDKTRLPG"
     gene            1696..2610
                     /locus_tag="VHX39_20715"
     CDS             1696..2610
                     /locus_tag="VHX39_20715"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HEX3993599.1"
                     /translation="MRVTQKVKKILDWYEGDPPGVKANLARILCTGKLGGTGKVVILP
                     VDQGFEHGPARSFAPNPPAYDPHYHYQLAIEAGLNAYAAPLGMIAQGADTFAGQIPTI
                     LKCNSSNSLATNKDQAVTAGVKDALRLGCAAIGFTIYPGSEFAFAQMEELRELTAEAK
                     DAGLAVVVWSYPRGPNLDRAAETAVDICAYAAQMAALLGANIIKVKPPTAVISLEAAK
                     KSYEGFDGSTLAKRVAHVMQSSFNGKRIVVFSGGEAKDLDGVYEEVRGLRDGGANGSI
                     IGRNTFQRPKEKALEMLNKIIDIYKNGD"
     gene            2619..3284
                     /gene="thiE"
                     /locus_tag="VHX39_20720"
     CDS             2619..3284
                     /gene="thiE"
                     /locus_tag="VHX39_20720"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEX3993600.1"
                     /translation="MSQRGAQDPDAAAAGCRIYLITPPVLEPMSFADRLAAALDAGDV
                     AAVQLRLKDVDDDTWRRAIDVLRPVTQARDVAFLLNDRADLVVSTGSDGVHVGQDDMP
                     ARQARALIGPERTLGVTCKGSRDLAMQAGEDGADYVAFGAFFPSTTKDVTNLLDPEIL
                     AWWSEMMELPSCAIGGIAPENCGPLVRAGTDFLAVVGCIWNHPDGPAAGVKALNRAIA
                     ENA"
     gene            complement(3508..3951)
                     /locus_tag="VHX39_20725"
     CDS             complement(3508..3951)
                     /locus_tag="VHX39_20725"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEX3993601.1"
                     /translation="MSNDALPPPKGPEPEQQPRHVRPRIIAAPKHGQIYWCDFWLDAQ
                     LPEMWKTRPVVVISYKNALRGPCLVVPASTDPQGSSPWAWELSISIDGRRNWVICNHL
                     YTIAPSRLSQVKGRIPRVPNAEFNEILKRISAWLPRPFELDKKSQ"
     gene            complement(4025..>5285)
                     /locus_tag="VHX39_20730"
     CDS             complement(4025..>5285)
                     /locus_tag="VHX39_20730"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3993602.1"
                     /translation="HKATEAELRAAKEAAERADQAKTRFVAMVTHELRTPLNGILGYA
                     QLLRLEGELSVQQNARVAAMMQSGRHLFGMVERVLDVASIESGRMELHNVSLSVHELA
                     EACIATIGPLASERGLSLHLVWSHDAPRQIVADPARLRQVLLNLLGNAVKFTAAGSVE
                     LRVLAGDGSRRLRLEVADTGPGIKEAARDRLFQDFERLDAPSAVEGSGLGLAIAARFV
                     TLMGGSLGHSPNSSGGSIFWLELPGNEPAAVPPEEPIVPALPLAARRILLVDDIAMNR
                     DVVGAFLRSSGHEVVLADNGQDGIRLASEQNFDVILMDVRMPEMDGLEATRQIRALPA
                     QHGHVPILALTAGVLPDEIAECEAAGMDGLVAKPVEYTKLMQAIADMAGCRQPGWSTN
                     AGGLCRIEPGANASPRLDRAVLDRLLT"
BASE COUNT          966 a         1696 c         1676 g          947 t
ORIGIN      
        1 ccccccacca cgacgtcctc cggcggcggc agcccggcca gcacatggcg cgccaacacc
       61 cgccccagcg ccggatcaca tgcgtcgcgc agcaagcgcg cccggttgcg cgcaagccgc
      121 ttggcctcat cgaggtcagg gaaaaaactg tgcggagccg ccatggccgt tggcgtacca
      181 tcctcccaga gcctgcttgt gcaggtgggc accagatacc gagaccagga tcccggcaga
      241 gccagctccc aagggagatg cttactggcc ctggggatgt atgacctgac gcacccggca
      301 gccccgccaa ggtaatgtag ggtgcttcag gtcacgcggc aatgaattcc atgaccggcg
      361 aaactccgat ctggcccggg acggtagaaa gattcagccc ggggcgcaga agagcgccta
      421 cgaagacggg tccgccgccg gatctgacgc tgcagccagt ggcaacgtct cggctgagtc
      481 agcgattgcc tcggcccgtt tggtcaaccc gcgcaatctg cgcccggctc ttggctcagc
      541 tctgggtgcg ggtgccgctc cggcttgctg gtgctgcaag tactcccgcg tgtcatgcag
      601 ttcatcggac agcatcagcg ctgccatcag cagaagccgc gcctcgccac ctggccccgt
      661 cgaggccttg atctcctcga tccggcggtc gaggtcggcc gccagcgtaa acagatgctc
      721 ttcctcacca tccgcgcagc cgaggatgta ggcataaccg ttgatctgga gtgaaacctg
      781 cgccattccg cgcgatcctt ccctgtctca gtcggcggcc tcacggtcca ccgaatgtaa
      841 atgcagtccc gcttcagtcc cgggaagggg ctggcgggcc tcccatccct ggcgggcctc
      901 ccatccctgg cgggcttccc atccctggcg ggcttcccag aatatctcgc agccgcagga
      961 tcaatccgtc caacctcgcc acgagctccg ccgaaggtgg cgccgacctg gcggcatcca
     1021 gattctgggc aatccgctcc agcgccgcct ccagccggtt ggccacggca tccatgtctt
     1081 ctgtgccgtc accgtcagtt tcctgtggcg cggtgcgttc cgccatgacg actccagtcc
     1141 ctgtgccggg gtgaatgaac ctggcagttg tcagaacgtc aagcacggtg tttgaaaagg
     1201 gccatggagc accatcctgt cgtgattgtg cacagttttg gcgaggctgt tgcgggcctg
     1261 gcagaggcgc aggccattgg ccgcggggtc acgttgctgt ccgcgccggg agcggcattg
     1321 tatgcgggtt gtggctggtg gcgggccctg gtcgaggcgg cgcgagccaa atacccggat
     1381 gtgccgtgca cggacgtact ggactgcgca gatgggaccg gtcaggcgct ggctgcattg
     1441 cggattggcc tgacgcggtt ggtgttgtgg cccgacgcgc ctggtcgcga ggccatcgtc
     1501 accatcgcgc aatcactggg cggattcgtt ttgccggcac cgccgccggc tgcagcggtc
     1561 atgcggcctt cgcatcgtcc ggccgaagcg aaatccggcc ccaggaatga gccgtcagga
     1621 aacggtgaca aaacccggtt gccaggttag ttgttatcgc gatcagcaaa tgctcccagg
     1681 aaaaggatca gcaccatgcg cgtgacccag aaagtgaaga aaatcctcga ttggtatgag
     1741 ggcgacccgc ctggcgtgaa ggccaatctc gcgcggatcc tgtgcaccgg gaagttgggc
     1801 ggcaccggca aggtggtcat actgccggtc gatcagggct tcgagcacgg gccggcccgc
     1861 agctttgcgc ccaacccgcc ggcgtatgat cctcactacc actaccaact cgcgatcgaa
     1921 gcgggcctga acgcctacgc cgcgccgctt ggcatgatcg cgcaaggcgc cgacaccttc
     1981 gcgggccaaa tcccgacgat cctcaagtgc aacagttcca acagcctggc gaccaacaag
     2041 gaccaggcgg tgaccgccgg cgtcaaggat gcgctgcggc tcggctgcgc cgccatcggc
     2101 tttacgattt atcccggcag cgaattcgcc tttgcgcaaa tggaagagct gcgggaattg
     2161 accgcggaag ccaaggacgc cggcctcgct gtcgtggtct ggagttaccc gcgtggcccg
     2221 aacctggatc gcgccgccga gacagccgtc gatatctgcg cctatgctgc gcagatggcc
     2281 gctttactgg gcgccaatat catcaaggtg aagccgccga ctgccgtgat cagcctggaa
     2341 gctgccaaga agagctacga ggggttcgat ggttcgactc tggcgaaacg cgttgcgcac
     2401 gtcatgcagt cgtcgttcaa cggcaagcgt atcgttgtgt tctctggcgg cgaagcgaag
     2461 gacctggacg gcgtctacga agaagtgcgc ggcctccgcg acggcggcgc caacggctcg
     2521 atcatcgggc gcaacacgtt ccagcggccg aaggaaaagg cactggagat gttgaacaaa
     2581 attatcgaca tctacaagaa cggcgattga tcacgcggat gtcgcagcgg ggtgcccagg
     2641 atccggatgc ggctgcggcg ggctgccgga tttatctgat caccccgccg gtgctggagc
     2701 cgatgtcgtt tgccgatcgc ctcgccgccg cgcttgatgc cggcgacgtg gcggcggtgc
     2761 aattgcggct gaaagacgtg gacgacgaca cctggcgacg ggcaatcgac gtgctgcggc
     2821 cggtgacgca ggcgcgcgac gttgcgtttc tgttgaacga tcgtgcagat cttgtggtgt
     2881 cgaccggcag cgatggcgtg catgtcggtc aggacgacat gccggcgcgg caggcgcgtg
     2941 cactgatcgg gccggagcgg acgcttggcg taacctgcaa aggcagccgc gacctcgcga
     3001 tgcaggcggg cgaggatggc gcggattatg tcgccttcgg tgcgttcttt ccgtcgacga
     3061 caaaggatgt gacgaacttg ctcgatccgg aaatcctggc gtggtggtcg gaaatgatgg
     3121 agctgccgtc gtgcgccatc ggcggcatcg cgccggagaa ttgcgggccg ctggtgcggg
     3181 ccgggacgga ttttctggcg gttgttggtt gcatttggaa ccatccggat gggccggcgg
     3241 ctggggtgaa ggcgctgaac cgggcgattg cggagaacgc gtaagggcag gggaagtcgt
     3301 tggcgaaccg atcgccgcgg gacggctgcg cgacgaatct ccagggctgg cgcgccgatg
     3361 tctgaggtgg agcagcgccg cgtcatgttt ctcggcgtcc cgaggcccag acaaaccaaa
     3421 gggagccctg cggctcccct ggcgagtcac tcccttgcgg gcaacggtca tccggcgaac
     3481 cggagccgca atgtgactta actggggcta ctggctcttt ttgtcaagct cgaacggccg
     3541 cggcaaccag gcagaaattc gcttcagaat ttcattgaac tccgcgtttg ggacgcgagg
     3601 gatacgtccc ttcacctggg acagacggct cggtgcaatc gtgtagagat ggttgcagat
     3661 cacccagttt cttcgcccat cgatcgaaat tgatagctcc cacgcccacg gactgctgcc
     3721 ctgcggatcg gtcgaggccg gcaccacgag gcacgggccg cgcaatgcgt tcttgtagga
     3781 aatcaccaca accgggcggg tcttccacat ctccggcaac tgtgcgtcga gccagaagtc
     3841 gcaccagtat atttgtccat gctttggcgc tgctatgatg cgcggccgca catgccgcgg
     3901 ctgttgctca ggctccggac cctttggcgg cggcaaggca tcgttgctca taccggagcc
     3961 tttcatcaga ggcaaacaaa gcaatcagtg acgaaaggat tgcggcatct tcattcgtcg
     4021 ccggttacgt cagcagccga tccagtacag cgcgatccaa ccgaggtgac gcgtttgcgc
     4081 caggctcgat ccggcataac ccccctgcat tggtgctcca tcccggctga cggcagccgg
     4141 ccatatcggc gatcgcctgc atcagcttcg tgtattccac tggcttggcg acaagcccgt
     4201 ccataccggc tgcctcacat tcggcgatct catccggcaa cacgccggcg gtcagcgcca
     4261 ggatcggcac gtgcccgtgc tgcgccggca acgcccggat ctgccgggtc gcctccagcc
     4321 catccatctc cggcatccgc acatccatca ggatgacatc gaagttctgt tcggaggcga
     4381 gacgaatgcc gtcctggccg ttgtccgcca gcacgacctc atgcccggag ctgcgtagaa
     4441 atgcgccgac cacatcgcgg ttcattgcga tgtcgtcaac cagcagaatc cgccgtgctg
     4501 ccaacgggag ggcgggcacg atcggctcct ccggtggaac ggcagcaggc tcattccccg
     4561 gcaattccag ccagaagatg ctgccaccgc tcgaattcgg gctatggcca agcgagccgc
     4621 ccatcagcgt gacgaaccgc gccgcgatgg caaggccaag gccggaaccc tcgaccgcgg
     4681 agggcgcgtc caaccgctcg aaatcctgaa acaagcggtc gcgcgctgcc tctttgatgc
     4741 cggggccggt atcggcaacc tccagccgca atcggcgtga cccgtcgccg gccaacaccc
     4801 tcagttccac cgatccggcc gcggtaaatt tcacagcgtt gccaagcaaa ttcagcaaca
     4861 cctggcgcaa tcgtgccggg tccgcgacaa tctgcctggg cgcgtcgtgc gaccaaacga
     4921 ggtgcagact caacccgcgt tcgctcgcca atggtccaat ggtggcgatg catgcttcgg
     4981 ccagctcgtg caccgacagc gacacattgt gcaattccat ccgcccggat tcgatactgg
     5041 caacatccag cacgcgctcg accatgccga ataaatgccg gcctgactgc atcatcgctg
     5101 cgacacgtgc attctgctgc accgacagtt ccccctccaa ccgcagcaac tgggcgtaac
     5161 cgaggattcc gttcagcggt gtgcgtaatt catgcgttac catggcgacg aaacgggtct
     5221 tggcctgatc ggctcgttcc gcggcctcct tggcggcgcg caattccgcc tcggttgcct
     5281 tatgg
//
LOCUS       DATAVD010001085         3167 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2335902, whole genome shotgun sequence.
ACCESSION   DATAVD010001085 DATAVD010000000
VERSION     DATAVD010001085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3167
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2335902"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..399)
                     /gene="ccmA"
                     /locus_tag="VHX39_20735"
     CDS             complement(<1..399)
                     /gene="ccmA"
                     /locus_tag="VHX39_20735"
                     /EC_number="7.6.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015439 - ABC-type heme transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
                     /protein_id="HEX3993603.1"
                     /translation="MNVLAAEDVAVFRGERLLLRDLSFTVACGGALVLAGPNGSGKST
                     LLRLLAGLVRPAAGRVSWDGIDALVDPARHGRRVAYVGHQDAVKPGLTVTENLHFAAS
                     VSGRPIAAALAALGLEALADLPARMLSAGQK"
     gene            566..>3167
                     /gene="acnA"
                     /locus_tag="VHX39_20740"
     CDS             566..>3167
                     /gene="acnA"
                     /locus_tag="VHX39_20740"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEX3993604.1"
                     /translation="MTAIGHDSIKSRRTLTVEGKPYDYFSLPEAAKTLGDISRLPVSL
                     KVLLENTLRFEDGHSYKVDDAKAIVGWLEKASSTKEVPFKPARILLQDFTGVPAVVDL
                     AAMRDGLTKLGGNPQKVNPLVPVDLVIDHSVMVDVFGRADALQKNVDIEFERNEERYK
                     FLRWGQDAFDNFRVVPPGTGICHQVNLEYLGQCVWTSSNGGTNFAYPDTLYGTDSHTT
                     MVNGLGILGWGVGGIEAEAAMLGQPIAMLIPDVIGFRLTGKTAEGVTATDLVLTVTQM
                     LRKKGVVGKFVEFFGPGLDSLGLPDRATIGNMAPEYGATCGFFPVDKVALDYLHLSGR
                     DTHRIALVEAYLKAQGMFHEPGKPDPIFTDTLELDLSTVQPSMAGPKRPQDRVLLKDI
                     ATSFKSDLTKGLGVPANEAGTSVKVEGKNYELTHGDVVIAAITSCTNTSNPSVLVAAG
                     LVARKAHAKGLKPKPWVKTSLAPGSQVVTEYLDKSGLTADLDAIGFETVGYGCTTCIG
                     NSGPLEDAIVDAIEDNRLVGAAVISGNRNFEGRVHANVRANYLASPPLVVAYALLGKV
                     TVDITTEPLGIGTDGQPVYLRDVWPTNKEIADVIAVSLSRDQFLKRYGEVFKGPKQWQ
                     AIEVDGDNATYRWNDGSTYVKNPPYFDGMTMEPAPVGDVTGARVLAELGDSITTDHIS
                     PAGSIRKASPAGDYLGERQVTQANFNSYGARRGNHEIMMRGTFANIRIRNEMLKNVEG
                     GMTRHLPDGKEMPIYDAAMLYKKEGVPLVVFGGKEYGMGSSRDWAAKGTALLGIKAVI
                     VESFERIHRSNLVGMGVLPLQFKDGVTAQSLKLDGTETYDVVGLDSSLRPQQDLKLRI
                     THKAGQAEEIA"
BASE COUNT          615 a         1106 c          967 g          479 t
ORIGIN      
        1 tttctgtccg gccgagagca tcctggccgg caggtcggcc agcgcctcca accccagtgc
       61 cgccagtgcc gcggcgatcg ggcggccgga caccgaggcg gcgaagtgta gattctccgt
      121 caccgtcaat cccggcttca ccgcgtcctg gtgcccaaca tacgccacac gccgcccatg
      181 ccgcgccgga tcaaccagag catcaatccc atcccacgat acccgccccg cggccggccg
      241 caccagaccc gccaacaatc gcagcagcgt cgacttgccg gacccgttcg gccccgccag
      301 caccaacgca cccccgcatg ccacggtgaa cgacaaatcg cgcagcaaca gcctctcgcc
      361 cctgaacacc gcaacgtcct cggccgctag cacgttcacc ccccaatcca tgccgcgccg
      421 cacaagcccg acggacgaac cccgatggac gaccgggggc cggtgtggtt aaagccgagc
      481 cttgggaata tttcatccgc ggcgtgttcg ccaccccacg ccgccttaac ggaaggcacc
      541 ccgtgaaccg gggcgtaacg ggcgcatgac cgcaatcggg cacgattcaa tcaaatcacg
      601 ccgcacactc accgtcgaag gaaaaccgta tgactatttt tcgctgccgg aagcagcgaa
      661 gaccctcggc gacatttcgc ggcttcccgt cagcctgaag gtcctgctgg agaacaccct
      721 gcggtttgag gacggccaca gctacaaggt cgatgacgcc aaggcgatcg tcggctggct
      781 ggaaaaggcg tcctccacca aggaagtgcc gttcaagccc gcccgcatcc tgctgcagga
      841 tttcaccggt gtgcccgccg tcgtcgatct cgccgccatg cgtgacggcc tcaccaagct
      901 cggtggcaac ccgcagaagg tcaatccgct ggtgccggtc gacctggtga tcgaccactc
      961 ggtgatggtc gatgtgttcg gccgcgccga cgcgctgcaa aagaacgtcg atatcgagtt
     1021 cgaacggaat gaggagcgct acaagttcct gcgctggggc caggatgcgt tcgacaattt
     1081 ccgcgtcgtg ccgcccggca ccggcatctg ccatcaggtg aacctggaat atctcggcca
     1141 gtgcgtgtgg acgtcctcca acggcgggac gaacttcgct taccccgaca cgctgtatgg
     1201 caccgacagc cacaccacga tggtcaacgg cctgggcatc ctgggctggg gcgtcggcgg
     1261 catcgaggcc gaggccgcca tgctcggcca gcccatcgcc atgctgatcc ctgacgtcat
     1321 cggcttccgc ctgaccggca agaccgccga gggcgtcacc gccaccgatc tggtgctgac
     1381 cgtgacccag atgctgcgca agaagggcgt ggtcggcaaa ttcgtcgaat tcttcgggcc
     1441 gggcctggac tcgctgggcc tgccggatcg cgccaccatc ggcaacatgg ccccggaata
     1501 cggcgccacc tgcggcttct tcccggtgga caaggtcgcc ctcgactacc tgcatttgtc
     1561 tggccgcgac acccaccgca tcgcgctggt cgaggcttac ctgaaggccc agggcatgtt
     1621 ccatgaaccc ggcaagcccg acccgatctt caccgacacg ctggaactgg acctgtccac
     1681 ggtgcagccc agcatggcgg gcccgaagcg cccgcaggac cgggtgctgc tcaaggatat
     1741 cgccaccagc ttcaaatccg acctgaccaa gggcctgggc gtgcccgcga acgaggcggg
     1801 cacatccgtc aaggtcgagg gcaagaacta cgaactgacc catggcgacg tggtgatcgc
     1861 ggcgatcacc tcctgcacca acacctccaa cccatcggtc ctggtcgccg ccggtctggt
     1921 ggcccgcaag gcgcacgcca agggcctgaa gccgaagccc tgggtgaaga cgtccctggc
     1981 gcccggctcg caggtggtga ccgagtatct cgacaaatcc ggcctgaccg cagacctcga
     2041 cgcgatcggg ttcgagacgg tcggctacgg ctgcacgacc tgcatcggca attccggccc
     2101 gctggaagac gccatcgtcg acgcgatcga ggacaaccgg ctggtcggcg cggcagtgat
     2161 ctccggcaac cgcaactttg aaggccgcgt gcatgccaac gtccgcgcca actacctggc
     2221 gtcgccgccg ctggtggtgg cctacgcgct gctgggcaaa gtgaccgtgg acatcaccac
     2281 cgaaccgctg ggcatcggca ccgacggcca gccggtctat ctgcgggacg tatggccgac
     2341 caacaaggaa atcgccgacg tcatcgccgt cagcctgtcc cgcgaccagt tcctcaagcg
     2401 ctacggtgag gtattcaagg gtccgaagca gtggcaggcg atcgaggtcg acggcgacaa
     2461 cgccacctat cgctggaacg acgggtccac ctacgtcaag aacccgccct acttcgacgg
     2521 catgacgatg gagccggccc cggtcggcga tgtcaccggc gcccgcgtgc tggcggaact
     2581 cggcgacagc atcaccaccg accacatcag cccggccggt tccatccgga aggcgtcccc
     2641 ggcgggcgac tatctgggtg agcggcaggt cacccaggcc aacttcaaca gctacggcgc
     2701 ccggcgcggc aatcatgaga tcatgatgcg cggcaccttc gccaacatcc gtatccgtaa
     2761 tgagatgctg aagaacgtcg aaggcggcat gaccaggcac ctgccggacg gcaaggagat
     2821 gccgatctac gacgcggcca tgctctacaa gaaggaaggc gtgccgctgg tggtgttcgg
     2881 cggcaaggaa tacggcatgg gcagctcgcg cgactgggcg gccaagggca cggcgctgtt
     2941 gggcatcaag gccgtgatcg tcgagagctt cgagcgcatc caccgctcga atctggtcgg
     3001 catgggcgtc ctgccgctcc aattcaagga cggggtgacg gctcaaagcc taaagcttga
     3061 cggcactgag acttacgacg tggtcggcct ggattcctcc ctccggcccc agcaggatct
     3121 caagcttcgc atcacccaca aggccggcca ggccgaggag atcgcgg
//
LOCUS       DATAVD010001086         3910 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3455155, whole genome shotgun sequence.
ACCESSION   DATAVD010001086 DATAVD010000000
VERSION     DATAVD010001086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3910
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3455155"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1467
                     /locus_tag="VHX39_20745"
     CDS             <1..1467
                     /locus_tag="VHX39_20745"
                     /EC_number="1.5.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014105740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004174 -
                     electron-transferring-flavoprotein dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HEX3993605.1"
                     /translation="AVLEPRALNELIPDWAERGAPLDTPAREDRFLWLTEANSTRLPT
                     PPQMRNHGNYIVSLGNFVRWLGVQAEELGVEIYPGFAAAELLDEDGRIVGIATGDMGI
                     GRDGRPTDSFQRGMELRAKYTLFAEGCRGSLSKELIHRFNLREGHDPQTYAIGIKELW
                     EIPAEKHKPGLIVHSIGWPMNAGTYGGSFVYHFGENLVSYGFVIGLDYSNPYLSPFEE
                     MQRFKTHPDVRGHFEGGRRISYGARALNEGGLQSIPKLTFPGGALIGDSAGFVNVAKI
                     KGTHTSMKTGMLAAEAVVDALAGSYPDELTAYPEALRESWVWDELSRVRNIRPAFAKW
                     GMWGGLVYSAIDTYLFRGRAPWTFHHAHADNETLMEKSQVRPIEYPRPDGKLTFDRLS
                     SVFISNTNHEENQPSHLQLRDPAKAIGVNYKIYASPETRYCPAGVYEIEEVAGKPQLR
                     INAQNCVHCKTCDIKDPTQNINWVTPEGGGGPSYPGGM"
     gene            1731..1949
                     /locus_tag="VHX39_20750"
     CDS             1731..1949
                     /locus_tag="VHX39_20750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993606.1"
                     /translation="MVLSGTLLSVLFGGMTWAGAAPLLVAGMIGLIWPENAALQAAGQ
                     AVATDVAGVVTAYINKGTTTPPSPSSRV"
     gene            2051..>3910
                     /locus_tag="VHX39_20755"
     CDS             2051..>3910
                     /locus_tag="VHX39_20755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014457165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEX3993607.1"
                     /translation="MTLLVISAAIIRLGGRVLLDGADLTIDLGRRIGLVGRNGAGKST
                     LLRAITGDIALDGGDMRFARNTRIATVRQEAPEGPASLLDTVLEGDPERLTLLAEVES
                     ANPLRVAEIHERLRAIGADSAPARAATILAGLGFDEAAQARPVSSFSGGWRMRVALAT
                     ALFANPDLLLLDEPTNHLDLEATLWLEGWLARFPGAALVVSHDRGLLDRAVEAIAHLD
                     RGKISLTPGGFDEFVRIRTEKALQQSRAVERVAAERAHIQSFIDRFRYKASKARQAQA
                     RIKALARLPQIENVIEDAPTRFVFPEPARIAPPVLALQHVDVGYDGIPVLRDLSLTID
                     MDDRIALLGANGNGKSTLAKLLAGRLAPLCGELRRGPKLRVGYFAQHQTDELVLDENS
                     VDHMARVMPRATETVVRSQLARFGLDAARAETPVINLSGGEKARLLLALATRDAPQLL
                     ILDEPTNHLDIDAREALVKALADFEGAVLLITHDPHLVELVADRLWLVAEGTVRPFDG
                     DLDDYRTLLAERGRPAGKAEIGGRKDDRRERAAARAVLAPLRKQAKDAEARLAQLTAE
                     RVAIEAKLADPALYAPGRTNDIVVANARLASIRREAEMVEALWLAAEEALEAAS"
BASE COUNT          769 a         1099 c         1220 g          822 t
ORIGIN      
        1 gccgtcctgg agccccgcgc gctgaacgaa ctcattccgg attgggccga gagaggtgcg
       61 ccgctggaca cgccggcccg cgaggatcgg ttcctttggt tgaccgaagc caattccacc
      121 cgcctgccga ccccgccgca aatgcgcaat catggcaact acatcgtgtc gctcggcaat
      181 ttcgtgcgct ggctcggtgt acaggcggaa gagcttggcg tggagatcta tcctggtttt
      241 gcggccgccg aactacttga tgaagacggc cggatcgttg gcatcgctac cggtgacatg
      301 gggatcggca gagacggcag acccactgac agtttccagc gcggtatgga gttgcgcgcg
      361 aaatatacgc tgtttgctga gggttgccgc gggtcattga gcaaagaatt gatccatcgc
      421 ttcaatctac gcgagggtca cgacccgcag acctatgcga tcggcatcaa agagctgtgg
      481 gaaatccccg cggagaaaca taagccgggc ctgatcgtgc attcgatcgg ctggccgatg
      541 aacgccggca cctatggcgg atcgtttgta tatcatttcg gcgagaatct cgtctcctac
      601 gggttcgtaa ttggtctgga ttatagcaat ccgtacctgt cgccgtttga agagatgcag
      661 cgcttcaaga cccatcccga cgtgcgaggt catttcgaag ggggccgtcg aatttcgtat
      721 ggtgctcgcg cgttgaacga aggcggactg caatcgattc cgaaactgac gttccccggc
      781 ggcgcgttga tcggcgattc ggcggggttt gtgaatgtag cgaaaatcaa aggcacgcat
      841 acatcgatga agaccggtat gctggcggcc gaggcggtgg ttgacgcttt ggccggatct
      901 tatcctgatg aactaaccgc ttacccagag gcattacgcg aaagttgggt ttgggacgag
      961 ttgagccgcg tacgcaacat cagaccggca ttcgccaaat ggggcatgtg gggtggtttg
     1021 gtttattccg ctatcgatac ctacctgttc cgcggccggg caccgtggac gtttcatcat
     1081 gcccatgccg acaatgagac gctgatggag aaatctcagg taaggccgat cgagtatccg
     1141 cggcctgatg gcaagctgac attcgaccgg ttgagctcgg tcttcatcag caataccaat
     1201 catgaggaaa accagccctc gcatcttcaa ttgcgcgatc cggcaaaggc gattggcgtc
     1261 aattacaaaa tttatgccag cccggagacg cggtattgtc cggcaggcgt ctatgaaatc
     1321 gaggaagttg caggcaagcc gcaactgaga attaacgcgc aaaactgtgt ccattgcaaa
     1381 acctgcgata tcaaggaccc aacgcaaaac atcaactggg tgactcccga gggcggcggt
     1441 gggcccagtt acccgggcgg gatgtaggct gattgcatat cgggtcaggc cgacggccgt
     1501 gaggtgcgtc cacgatctgc atggcgtacc tcccggttcg atcgaactga tctccagatg
     1561 agaacctaac gggtacagcc gtatggcgtc ataggtctat ttgccttgtc gcgattttac
     1621 aaccagagga atttcctggt tcgcggccca tccgctcctt ttatagagaa catatagtgc
     1681 tcaattcgtt aaagacctgg cttggcgagg ttacaacagg ccacggggtc atggtccttt
     1741 ccggcaccct cctgtcagtc ctcttcggtg gtatgacctg ggccggcgct gcgcccttgc
     1801 tggtggccgg tatgatcggt cttatctggc cggagaatgc tgcgctgcaa gccgccgggc
     1861 aggcggtggc gacggatgtg gccggcgtcg tcacggccta catcaataag ggaactacca
     1921 ctccgccgtc gccatcgtcc cgggtctgac agcaaccgaa aattccatag gaggttcttt
     1981 ggtaccgaaa agcgcgttat gatcggcgag acatcacaac gcacgtctct tacggtttct
     2041 cgcccaactc atgacgctac tggttatttc cgctgccatc atccgccttg gtggccgagt
     2101 tctgctggac ggggctgatc tcacgatcga cctcggccgg cgcatcggtc tcgtcggtcg
     2161 taatggcgcc ggcaagtcca ctctgctgcg ggcgatcacg ggcgatatcg cactcgatgg
     2221 tggcgacatg cgattcgcca ggaatacccg catcgccacc gtgcggcagg aggcgccgga
     2281 gggtcccgcg agtctgctcg acaccgtatt ggaaggcgat cccgaacgcc ttactttgct
     2341 ggccgaggtc gagagcgcca acccgctgcg ggtggctgag atccacgagc gcctgcgtgc
     2401 catcggtgca gattcagcac ctgcgcgtgc cgccaccata ctggcgggcc tcggctttga
     2461 tgaggcggca caggcccggc cggtgtcttc cttctccggt ggctggcgga tgcgcgtggc
     2521 gctggcgacc gcgttgtttg ccaatcctga tttgcttctg ctcgacgaac cgaccaacca
     2581 cctcgatctg gaggcaacgc tttggctgga aggctggctt gcccgctttc ccggggcggc
     2641 gctcgtggtc tcacacgacc gcggactact cgatcgggcg gtcgaggcga tcgctcatct
     2701 cgaccgtggc aagatctcac tgacgccagg cgggttcgac gagttcgtac gcattcgaac
     2761 cgaaaaagcc ttgcagcagt cccgcgctgt tgaacgggtc gcagcggaac gagcgcatat
     2821 tcaaagtttt atcgaccggt tccgctataa ggccagcaag gcacggcagg ctcaggcgcg
     2881 gatcaaggcg ctggcgcgtt tgccgcaaat tgaaaacgtc attgaggatg cgccgacccg
     2941 gtttgtgttt ccggaaccgg cgcggatcgc tccaccggtt cttgcattgc agcatgtcga
     3001 tgttggttac gatggtattc cggtgttacg tgatctgtcg ctgaccattg atatggacga
     3061 tcgcatcgcg cttctgggtg cgaacggcaa cggtaagtcc acactggcta aacttctggc
     3121 cgggcgcctc gctccgctat gtggggaact caggcgtgga ccgaagctaa gggtcggtta
     3181 tttcgcgcag catcagacgg acgaactggt tctggacgag aattcggttg atcacatggc
     3241 gcgggtcatg ccgcgtgcga ccgaaacggt ggtgcgctcg caactcgcca ggtttggcct
     3301 tgatgccgct cgcgccgaaa cgccggtgat caatttatcg ggcggtgaaa aggcgaggct
     3361 gttgctggcg ctcgccaccc gcgatgcgcc gcaattgctc atcctggacg aaccaacaaa
     3421 ccatctggat atcgatgcgc gcgaagcttt ggtcaaggca ttggcggact tcgaaggcgc
     3481 cgttttgctg atcactcatg atccgcattt ggtggagctt gtggctgatc gcttatggtt
     3541 ggtcgcagaa ggaaccgtac gtccgtttga tggcgatctc gatgattacc gtacgttgct
     3601 ggcggagcgc ggccggcccg ctggcaaagc cgaaattggc ggccgcaaag atgatcggcg
     3661 cgagcgtgcg gcggcgcgtg cggtactggc gcccttacga aaacaggcta aagatgccga
     3721 agcacggctg gcgcagttaa ccgccgagcg cgtggcgatc gaggcgaaac ttgctgaccc
     3781 cgccttgtat gctcctggcc gcacgaatga tattgtggtt gcgaacgcac ggctggcatc
     3841 aatccggcgc gaagcggaaa tggtggaggc actttggctc gccgccgagg aggcgttgga
     3901 agcagcatcg
//
LOCUS       DATAVD010001087         5049 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_290317, whole genome shotgun sequence.
ACCESSION   DATAVD010001087 DATAVD010000000
VERSION     DATAVD010001087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5049
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290317"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(77..2089)
                     /locus_tag="VHX39_20760"
     CDS             complement(77..2089)
                     /locus_tag="VHX39_20760"
                     /inference="COORDINATES: protein motif:HMM:NF028509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HEX3993608.1"
                     /translation="MAKLMNFFTLRSIAAKLAAMATAGALFMVLIAVTVLLIARAELA
                     TERVEKAHAVVDGVWSMAENFHHAAETGAMTEAEAKARFFAAAGGFWFENHTNYLFIY
                     DTETGICVMNTGNPALLGKDVRGLKDANGLPFASMMIDIAKRQNEGTLRYVFAKGGSA
                     AMSDKIAYVRGFAPWHMMISTAEYMTDIDADFWSMTRTAGGVIGVLLVLSVGLTWAVA
                     HSIVGPLSRIRTRMAGLSAGDLSASVDGANRRDELGEMARALAVFRDHMVRENELATE
                     HEAARIQAEAAKRAALIGMADTIETETGAALKTISARTSAMAATADAMSASANRTGAS
                     AHDAATAAAQALANAQTVATAAEQLATSIREIGGQVAQSSDVVGRAVAAGTEARATIE
                     ALNHEVERIGTVADMISDIAGRTNLLALNATIEAARAGDAGKGFAVVASEVKALATQT
                     ARSTEEIARHIGQVRSATGASVAAVLRIEQTITEINTIASSIASAVEQQGAATAEIAR
                     NVTETANAANAMTSRTNDVTVEAVGTGRYATEVRDNTAALNEAVEELRHSVIRVVRTS
                     TTEVDRRQTPRHAVDRPARISVAGGGEIGVRVKDLSEGGAWLQGTPNVPVGTQGTLRL
                     DGHGVALNWVARTTDGDGMHVAFALDDAGRAALRAELQRSMGRAAA"
     gene            complement(2147..4162)
                     /locus_tag="VHX39_20765"
     CDS             complement(2147..4162)
                     /locus_tag="VHX39_20765"
                     /inference="COORDINATES: protein motif:HMM:NF028509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3993609.1"
                     /translation="MHTLSKLFSHRAIAGKLVAMAVAGALFMACVAVIVLLIARSALV
                     AERTEKAHAVVDAVWNMADGFQREVQSGALTADEAQQRFFAAAGEIWWEGHTNYAFIY
                     DTETGLNRMNTGNKSMVGKDMRGAKDARGVPFAAIMFDRIKSQPEGTVEYAFPKGTNP
                     TPLNKIAYFRDFRPWHLLIVSAEYMTDIDDTFWSMARTAATVIGVLMLFSFVIAWAVG
                     RSVVKPLTGLRTRMAGLSAGDLDSPVPGAHRHDEVGEMARAVLTFKEHMIRENELASE
                     QEAVRQQAQTELRRAALIGMANTVEAETGTALEGIGVRTMAMAKTADAMSASATRTGT
                     SAQDAATAAAQALANAQTVASAAEQLASSIREISAQVSQSTAVVSRAVEAGSEARTTI
                     EALNQEVERIGAVADMIGEIASKTNLLALNATIEAARAGDAGRGFAVVASEVKALATQ
                     TARSTQEIAQHIGQVRAATGASVAAVGRIEKTITEMDAIAASIATAVEEQGASTAEIA
                     RNVAETANAANKMTSRTGEVSNEAVDTGRLAADVRDNIVALNQVVEELRHSVIRTVRT
                     STTDVDRRHSSRRVVDLSARLGVAGQGETIVRVNDLSEGGARVSDAPVLPAGTRGTLR
                     IDGLAMALTWIARGTVGDGLHLEFAVDDAGRAAVRSLLERSGGRAAA"
     gene            4325..>5049
                     /locus_tag="VHX39_20770"
     CDS             4325..>5049
                     /locus_tag="VHX39_20770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011253201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEX3993610.1"
                     /translation="MAGHSHFKNMMHRKGAQDAKRARQFARLIREITVAAGQGMPDPA
                     FNPRLRAAVAAARQSNMTRDTIERAIKKAAGEGASDNFQEVRYEGYGPAGVAVIVEAL
                     TDNRNRTAGEVRSAFAKNGGALGETNSVSFMFNRVGAIRYPASAASEDAMLEAAIEAG
                     AENAAMDEDGHDITCAVEDFFGVRDALEAGFGAPESARLEWRPTTSVTLDEEKAANLL
                     KLLDVLEDSDDVQNVYANFDIPEA"
BASE COUNT          861 a         1649 c         1582 g          957 t
ORIGIN      
        1 gatcccgatc tgtcagatgg atgcgccggg acctgttggg cggcatcgcc ggcggatgcg
       61 gacagccagg cacagctcac gccgccgcac gtcccatcga ccgctgtagc tccgcgcgta
      121 aggctgctcg gcccgcgtca tccaacgcga atgcgacgtg cattccatcg ccatcggtcg
      181 tgcgcgcaac ccagttcagc gcgacgccat ggccgtcaag acgcagtgtg ccttgggttc
      241 ccaccggcac gttcggcgta ccctgcaacc aggcgccgcc ttcggagaga tctttgaccc
      301 gaacgccaat ctcaccacca ccggcaacgc tgatccgtgc tggccggtcc acggcatggc
      361 ggggggtttg gcgccggtcg acttccgtgg ttgacgtgcg cacgacacgg atcaccgaat
      421 ggcgtaattc ttcaaccgcc tcgttcagtg ccgctgtgtt gtcgcgcacc tccgtcgcgt
      481 agcgaccggt accgacggcc tcaaccgtga catcgttggt ccggctggtc atcgcgttcg
      541 cggcattggc ggtttcggtc acattgcgcg caatttccgc cgttgcggcg ccttgctgct
      601 caacggctga ggcaattgaa ctggcgatcg tgttgatttc ggtgatggtc tgctcgatgc
      661 gcaaaacggc ggcgaccgac gcgccggttg ccgaccgaac ctggccgata tgtcgtgcga
      721 tttcttccgt cgagcgcgcg gtctgcgtgg ccagtgcctt cacttccgac gcaaccacgg
      781 cgaaaccctt gccggcgtcg cccgcacggg ctgcttcaat cgtggcattc agcgccagca
      841 aattggtccg gcctgcgatg tcgctgatca tatcggcaac ggtaccgatg cgctcgacct
      901 cgtggttgag tgcttcgatg gtagcgcgtg cctcggttcc ggccgcgacc gcacgaccga
      961 ccacgtcgga cgattgggcg acctggccgc cgatctcgcg gatggatgtc gcaagttgtt
     1021 cagcggcagt cgcgacggtt tgcgcattcg ccagcgcctg tgcggccgcg gtcgccgcat
     1081 catgcgctga tgccccggtt cggttggctg acgcgctcat ggcatcggcg gttgccgcca
     1141 tggccgaggt tcgtgcgctt atggtcttta gggcggcacc ggtttccgtc tcgattgtat
     1201 ccgccatgcc gatgagtgcc gcgcgcttcg ccgcttcagc ctggatccgc gccgcctcgt
     1261 gttctgtggc gagttcattt tccctgacca tgtggtccct gaagaccgca agggcgcgtg
     1321 ccatttcgcc gagttcgtcg cgccggttcg caccatcgac cgatgcgctg agatcgccgg
     1381 cactaagccc cgccatacgc gtccggatgc gggacaacgg gccgacgatg ctgtgagcga
     1441 ctgcccaggt gaggccgacc gagagcacca gaaggacgcc gatcacccca cccgccgttc
     1501 gggtcatgct ccagaaatcg gcatcgatgt cggtcatgta ttcagccgtc gagatcatca
     1561 tatgccaggg tgcgaaaccg cgaacatacg caatcttatc cgacatggcc gcggaaccac
     1621 ccttggcgaa gacatagcgt agcgtaccct cgttctgccg tttcgcgata tcgatcatca
     1681 tcgaggcgaa cggcagaccg ttggcatctt taagaccacg cacatctttg ccgagcagtg
     1741 ccggattgcc ggtattcatc acgcagattc cggtctcggt gtcgtagatg aacaggtagt
     1801 tcgtatgatt ctcgaaccaa aaaccgccgg cggcagcgaa gaaccgcgct ttcgcttcgg
     1861 cttcggtcat tgcaccggtt tccgctgcgt gatggaaatt ctctgccatg ctccaaacgc
     1921 cgtcgacgac ggcgtgcgcc ttctcaaccc gctcggtcgc gagttcggcg cgggcgatga
     1981 gcaagacggt gaccgcaatc agcaccatga acagcgctcc ggctgtggcc atggccgcga
     2041 gtttggctgc gatggaacgg agtgtgaaaa aattcatcaa ctttgccatg atcagcttcc
     2101 gtccagatgc ggtcgtacgc ccaccggcgc ccgccaggtt aagtcatcac gccgcggcgc
     2161 gtccgcctga tcgctccagc agcgaccgca cggccgctcg accggcatca tccacggcaa
     2221 actccaaatg caggccatcg ccgacggtcc cgcgcgcgat ccacgtcagc gccatggcga
     2281 ggccatcgat ccgcagtgta ccccgcgtgc ccgcgggcaa aaccggagcg tcagacacgc
     2341 gcgcaccgcc ttcggagaga tcgttgacgc ggacgatggt ctcaccctgc ccggcaacgc
     2401 caagccgggc cgagaggtcc accacgcggc gcgacgaatg ccgccgatcc acgtcggtcg
     2461 tcgacgtgcg tacggtccgg atcaccgaat gccgcagttc ctccaccacc tgattgagcg
     2521 cgacaatatt gtcgcgcaca tcggcggcga gccgtccggt atcgaccgcc tcgttcgaga
     2581 cttcgccggt acggctggtc attttgttgg ccgcgttggc ggtttcggcg acgttgcggg
     2641 cgatttccgc agtcgatgcg ccttgttcct ccaccgcagt cgcgatcgaa gcggcgatgg
     2701 catccatttc ggtgatggtc ttctcgatgc ggccaaccgc tgcgaccgat gctccggtgg
     2761 ccgcgcgcac ctggccgata tgttgcgcga tctcctgcgt ggagcgtgcg gtctgcgtgg
     2821 ccaatgcctt tacctccgac gccaccacgg caaagccgcg gcccgcgtcg cctgcgcgcg
     2881 ccgcctcgat ggtcgcattc agcgccagca aattggtctt tgaggcaatc tcaccgatca
     2941 tgtcggcaac tgcaccaatg cgttcgacct cctggttcag tgcctcgatg gtcgtgcggg
     3001 cctcggaacc ggcttcaacc gcccggctga ccacggcggt ggactggctt acctgagcgc
     3061 tgatctcccg gatcgaggac gcgagttgtt cggccgcgct cgcgacagtc tgggcattgg
     3121 ccagcgcctg cgcagcagcc gtggctgcat cctgagctga cgtgccggtt cgcgtcgccg
     3181 atgcgctcat cgcgtcggcg gtcttcgcca tggccatggt gcggacaccg atgccttcca
     3241 gcgcggtgcc ggtttcggcc tcgactgtgt tcgccatacc aatgagcgcc gcgcgcctca
     3301 gttcggtctg cgcttgctgg cgcactgcct cctgctcgga cgcgagttcg ttctcccgga
     3361 tcatatgttc cttgaacgtc aggactgcgc gcgccatctc gccgacttcg tcgtgccggt
     3421 gcgcaccggg taccgggctg tcgagatcac cggcgctcag gccagccata cgcgtccgta
     3481 agccggtcaa cggtttcacc acgctccgtc cgaccgccca tgcgatgacg aaggaaaaca
     3541 gcatgaggac gccgatgacg gtggcggcgg tgcgggccat gctccagaac gtgtcgtcga
     3601 tgtcggtcat atactcggcc gaaacgatca gcagatgcca gggcctgaag tcccggaagt
     3661 aggcgatctt gttcagcggc gttggattgg tgcccttcgg gaatgcatat tctacggttc
     3721 cttcgggttg gcttttgata cggtcgaaca tgatcgccgc gaacgggacg ccgcgagcgt
     3781 ccttggcgcc gcgcatatcc ttgccgacca tggacttgtt gccggtgttc atccggttga
     3841 gcccggtctc ggtatcgtaa atgaaggcgt agttggtgtg gccctcccac cagatctccc
     3901 cggcggcggc gaagaagcgc tgctgcgcct catccgcggt cagcgcgccg gattgcacct
     3961 cccgttggaa gccatcggcc atattccaga cggcatcgac cacggcatgg gctttttcgg
     4021 tccgctccgc caccagggcg gagcgtgcga tcagcagcac gatcacggcg acacacgcca
     4081 tgaacagagc gccggccacg gccatggcga ccaacttgcc ggcgatcgcg cgatgcgaaa
     4141 acagtttcga cagagtgtgc atgatcaggc attccgttct gcagcgatgg gccacgtgag
     4201 ccgctgctgc ccgaccggct taaccgagat gccttaagga accgttaatg gctggtggga
     4261 tactcccctt ggccatcaat tggcggtatg ggatcgccac tcctccgcaa ctgaccaaga
     4321 gaccatggct ggccattccc atttcaagaa catgatgcac cgcaagggcg cgcaggatgc
     4381 caaacgcgcc cgccagttcg cgcggctgat ccgggagatc acggttgccg ccggtcaggg
     4441 aatgcccgac ccggcgttca acccgcggct ccgcgctgcg gtcgccgccg caaggcaatc
     4501 gaacatgacc agggatacga tcgagcgcgc gatcaagaaa gccgccggtg agggagcttc
     4561 cgacaacttc caggaagtcc gctacgaagg ctacggaccc gccggggtgg ctgtgatcgt
     4621 cgaggcgctg accgacaatc gcaaccgcac ggcaggcgag gtccggtcag ccttcgcgaa
     4681 gaacggtggc gctcttggcg agaccaattc cgtcagtttc atgttcaatc gggtcggagc
     4741 gatccgctat ccggcctccg ccgcgtcgga ggacgcgatg ctggaggccg ccatcgaggc
     4801 tggcgcggaa aacgccgcga tggacgagga cgggcacgac atcacgtgcg cggtcgagga
     4861 ttttttcggg gtgcgcgacg cgctggaggc cgggtttggc gctccggaaa gtgcgcggct
     4921 ggaatggcgc ccgacgacct cggtgacgct ggacgaggag aaggcggcca acctgcttaa
     4981 gttgctcgac gtgctggaag acagcgacga cgtgcaaaac gtttacgcca acttcgatat
     5041 tcccgaagc
//
LOCUS       DATAVD010001088         2125 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_852106, whole genome shotgun sequence.
ACCESSION   DATAVD010001088 DATAVD010000000
VERSION     DATAVD010001088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2125
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_852106"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="VHX39_20775"
     CDS             complement(<1..216)
                     /locus_tag="VHX39_20775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993611.1"
                     /translation="MLGFGYHAPLTIPAALLGILRLVLELAEHPRRFAGLFPLLSSCM
                     HLSPMILRSRWLRAMPNKKSTRWASHQL"
     gene            complement(322..744)
                     /locus_tag="VHX39_20780"
     CDS             complement(322..744)
                     /locus_tag="VHX39_20780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993612.1"
                     /translation="MAAVIGRPSCLPFSRAWTSPARVPSRRISRSKSVKDRQPAGHRA
                     TGWRSEIQRFGQRDETDTEILQFLEGREQVRHRPSPAIQPPHQHYIDCAAPRGLDQLL
                     TGLPLDNTRTDLAHLHCDGPAAPGAYSRRARFCMGSGC"
     gene            800..1012
                     /locus_tag="VHX39_20785"
     CDS             800..1012
                     /locus_tag="VHX39_20785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993613.1"
                     /translation="MSLLQPVSLIVKAIEEVRMIRLMYQGRQRMLEPHDHGISQRLGP
                     VNWLADCWLQRPPDLQLATDENGRNL"
     gene            1248..>2125
                     /locus_tag="VHX39_20790"
     CDS             1248..>2125
                     /locus_tag="VHX39_20790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HEX3993614.1"
                     /translation="MHIRVNARDNVAIILDPEGFVSAKERIPQCHKIALQSLDGGEPV
                     VRYGETIGFANRRIERGSWVREELVDTPAAPSLDDLPLATAVPAPPAPLEGYSFEGYR
                     NLDGSIGTRNILGLATTVQCVAPTVDFAVRRIKAELLPRFPNVDDVVSVTHSYGCGVA
                     IEAPGAAIPIRTLKNISMHANLAAQPLLVSLGCEKLQPARLLGSALPVLGEANIIRLQ
                     DQRGFAETVSAIMEAAEKRLRQLDQRRRETCPAAGLVVGLQCGGSDAFSGVTCNPAVG
                     YAADLLVRAGATVLFS"
BASE COUNT          417 a          642 c          673 g          393 t
ORIGIN      
        1 gagctggtgc gaggcccatc gagtggactt cttgtttggc atggcgcgca accagcggct
       61 gcgtaggatc atcgggctga gatgcatgca gctactgagc agtggaaata gaccggcaaa
      121 ccggcgcggg tgttcagcga gttccaatac cagacgaaga ataccaagca gggcggctgg
      181 gatcgtgagc ggcgcgtggt agccaaagcc gagcacattg acggcaagga aaacccgcgc
      241 ttcgtaggtt ggtgtcggcc agcgacggag agcaccgaaa atgttgcgcg ccggccttta
      301 cgcgcgcgct tccaccaatc atcagcagcc gctgcccata cagaatcgcg ctctgcggga
      361 atatgcgccc ggcgcggctg gaccgtcgca atgcaggtgc gcgaggtcgg ttcgggtgtt
      421 gtcgagcgga aggcccgtga gcaactgatc gaggccgcgc ggcgccgcgc aatcgatgta
      481 gtgctggtgt ggcggctgga tcgctgggga cggtcggtga cgaacctgct cgcgaccctc
      541 caggaactgg agtatctcgg tgtcggtttc gtctcgctga ccgaagcgct ggatctcact
      601 acgccagccg gtcgcgcgat ggccggccgg ctggcgatct ttcaccgatt tcgaacggga
      661 tatcctgcgc gaaggcacgc gcgccgggct ggtccaggca cggctgaacg gcaaacagct
      721 gggtcgaccg atcacggcgg ccatttctgg gccagccggc tgcacgagtt gctctctgaa
      781 tgcggcaaaa tggaggtgga tgtccctgct gcaacccgtt tcactgatcg tcaaagccat
      841 cgaagaagta cgcatgattc ggctgatgta tcagggcaga caacgaatgc tcgagccaca
      901 tgatcacggc atttctcaac gactcggtcc agttaattgg ctggcagact gctggctcca
      961 gcggccgccc gatctccaac tggctactga tgaaaacgga cgaaatctct gatctgatgt
     1021 tgctggatga gatcttccca ggaggacgtc cgaccgataa ggcgagcaca ttcaaatggg
     1081 acggactttt catcagactc agacctgccg ctgaaccgct gcgggccggc gggcgataag
     1141 gcccctctac caactcatca ccagtcgtct tacgcaggcc cgccggaagc tcacctcgca
     1201 tctcgcccat agcgagtgac ggcggccagc cgttacaatc gaatcacatg cacatccgcg
     1261 tgaacgcccg cgacaatgtt gccattattc tggacccgga aggcttcgta agcgccaaag
     1321 aacgaatccc ccaatgtcac aagatcgcct tgcagagtct cgatggcggc gagcccgtag
     1381 tgcgctacgg cgagaccatc ggcttcgcga accgccgcat tgagcgagga tcgtgggtac
     1441 gcgaagaatt ggtggatacg ccggccgcgc cctcacttga cgatttgccg ctggccacgg
     1501 cagttcccgc gccgccggcg ccgctcgaag gctattcttt tgaaggctac cgtaatcttg
     1561 atggcagcat tggcacgcgc aacatccttg gcttggcaac tacggtgcag tgcgtcgcac
     1621 ccacggtaga tttcgcggtg cgtcgcatca aggcggaact gctgccgcgg ttccccaacg
     1681 tggacgacgt agtttcggtg acgcattcct atggctgcgg cgtggccatt gaagcgcctg
     1741 gcgcagccat ccccatccgc acgctgaaga acatctccat gcacgccaat ctggcggccc
     1801 aaccgctcct ggtcagcttg ggatgcgaaa agctgcaacc ggcgcggctc ttaggcagcg
     1861 cccttcccgt gctgggcgag gccaacataa ttcgcttgca ggatcagcgc ggtttcgcgg
     1921 aaacggtctc agccatcatg gaagccgcgg agaagcgcct ccggcagctg gatcagcggc
     1981 ggcgcgagac ctgtcccgca gccggcctgg tggtaggcct tcaatgcggc ggcagcgatg
     2041 cgttctcagg agtgacctgc aatccggcgg tcggttacgc ggccgacctg ttggtgcgtg
     2101 cgggtgcgac cgtgctattt tccga
//
LOCUS       DATAVD010001089         2666 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_852239, whole genome shotgun sequence.
ACCESSION   DATAVD010001089 DATAVD010000000
VERSION     DATAVD010001089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2666
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_852239"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..389
                     /locus_tag="VHX39_20795"
     CDS             <1..389
                     /locus_tag="VHX39_20795"
                     /inference="COORDINATES: protein motif:HMM:NF019404.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TMEM43 family protein"
                     /protein_id="HEX3993615.1"
                     /translation="RDANGYTIALTEPGVVSAAALFHDEKQSESTLTWILRAVGFAVM
                     LIGFVCMTRPLTMLFAVVPVLESLLGTGAFLVALTLAIPVTLLTIAVAWIAHRPLVGG
                     ALLLGAIAAWYWLRQLHPQRTRPAVA"
     gene            complement(394..801)
                     /locus_tag="VHX39_20800"
     CDS             complement(394..801)
                     /locus_tag="VHX39_20800"
                     /inference="COORDINATES: protein motif:HMM:NF012272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019825 - oxygen binding [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="globin family protein"
                     /protein_id="HEX3993616.1"
                     /translation="MTPEQISLVRDSFAKVAPIAPAAAAMFYDRLFVLNPALRPLFKG
                     DMPEQGRKLMAMIGTAVANLHRLDDIVPAVRDLGRRHGGYGVKSDDYDTVATALLWTL
                     EQGLGADFTPATRDAWTTCYVVLAGEMKAAAAG"
     gene            complement(895..1287)
                     /locus_tag="VHX39_20805"
     CDS             complement(895..1287)
                     /locus_tag="VHX39_20805"
                     /inference="COORDINATES: protein motif:HMM:NF025292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin-like domain-containing protein"
                     /protein_id="HEX3993617.1"
                     /translation="MRDITGTWRLVGASSLDPQGNRLSPPYGPQAVGRIVFSAGNRVM
                     VAVSDGRPELPSGTKREYGGYCGDYSFDGTTLTTNVDAAPNAALVGTAQVRGVRFEGE
                     RMVLQPPPREIDGVVHHRELTWERISPV"
     gene            complement(1458..2060)
                     /locus_tag="VHX39_20810"
     CDS             complement(1458..2060)
                     /locus_tag="VHX39_20810"
                     /inference="COORDINATES: protein motif:HMM:NF013412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX3993618.1"
                     /translation="MESRPFYHDGMRSLQDRFDGRRVADALAAHRVRHDFWDDDRRMI
                     EQASYFFIATSFGEFVDCSMRSGAPGFVRIVGPGTIEFPEYDGNSMYRTLGNISRNPN
                     VGLLFAKFDGQSYRVRINGQAKILDDAESLARHHAAKLVISVQCELFSNCPRSVHDLP
                     NDRLSVYVPQPGHEPPAPEWKSRDYLRDILPAGDPHRGRD"
     gene            complement(2096..>2666)
                     /locus_tag="VHX39_20815"
     CDS             complement(2096..>2666)
                     /locus_tag="VHX39_20815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007400035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEX3993619.1"
                     /translation="ARGSIDAAQEAAMTHALLEVPARAAEVLEKDAEIQRIAALVAKA
                     RDVLYLGRGNCFPIALEGALKLKEISYIHAEGYAAGEMKHGPIALIDPLVPVIAIVPS
                     GPLFEKTASNLQEAAARGGQVIVFSDAAGAAKLRGIATETVVLPAVDPFVAPILYAIP
                     VQVLAYHVAVLKGTDVDQPRNLAKSVTVE"
BASE COUNT          509 a          863 c          776 g          518 t
ORIGIN      
        1 atcgtgacgc caacggatac acgattgccc tgaccgagcc gggtgtcgtc agtgcggcgg
       61 cattgttcca cgacgagaag cagtcggaga gcactctgac ctggattctg cgagctgtcg
      121 gcttcgctgt gatgctgatt ggcttcgttt gcatgacacg gccgttgacg atgctgttcg
      181 cggtggtgcc ggtcctggaa tcgctgcttg gtacgggagc gtttctggtg gcgctgacgc
      241 ttgcgatccc ggtcacgttg ctgacgatcg cggtcgcctg gatcgcgcat cggccactgg
      301 ttggcggcgc gctgctgctt ggtgcgattg cagcctggta ttggttacgc caactgcatc
      361 cgcagcggac ccggccggcc gtcgcctgat cgactacccc gctgccgcag ctttcatttc
      421 accggcgagc acgacgtagc acgtggtcca ggcatcgcgc gtcgcgggcg tgaagtcggc
      481 accgaggcct tgctccaacg tccacagcaa cgcagtggcc acagtatcgt aatcatccga
      541 cttgacaccg tagccgccat gtcgccggcc cagatcccgc actgcgggga caatgtcgtc
      601 gaggcgatgc agattggcga cagcggtgcc gatcatcgcc atcagcttgc gtccctgctc
      661 cggcatgtcg cccttgaata atgggcgcag cgcgggattt agcacgaaca agcggtcata
      721 aaacatggcg gcggcagcag gtgcgatcgg cgcgaccttg gcgaaactgt cgcgcaccag
      781 gctgatctgt tcgggcgtca tgatacctca ctgcggaacc ggcgtgcatt gcgtcgttgg
      841 ttaccgtttc tcagatattt ggctttcgca aggacccgcg acgccgcggt ctggtcagac
      901 cggactgatc cgctcccagg tcaattcgcg atgatgcacc acgccgtcga tttcccgagg
      961 tggcggttgc aggaccatcc gttcgccctc gaagcgcact ccgcgcacct gtgcggtgcc
     1021 gacaagagca gcgttcggtg ccgcatccac gttcgtcgtc aatgtcgtgc cgtcgaacga
     1081 gtagtcaccg caatagccgc catattcgcg tttcgtcccc gacggcaact cgggacggcc
     1141 atcggaaaca gcgaccatga cccggttgcc cgcgctgaac acaatgcggc cgacggcctg
     1201 tggcccgtag ggtggtgaca acctgttacc ctgcggatcg agtgaactgg ccccgacaag
     1261 gcgccaggta ccggtgatgt cacgcattgc ttacccccct tcggattttc gaaacgccgc
     1321 ccgacaccga ccgctggttg ccggcctgca agattggccg cgtttggcga cagagtcgat
     1381 gcttcctacc ccgccggaaa tttcctgtgc aacgccgacg agcttcaact caggcgtcag
     1441 cggcaattgg ccccgtctca atcccggccg cgatgcggat cgcctgcagg caaaatgtcc
     1501 cgcagataat ccctgctttt ccattccggc gcaggcggtt catgtcccgg ctgcggaacg
     1561 taaaccgaca atcggtcatt cggcagatcg tgcaccgagc gagggcagtt ggaaaacagc
     1621 tcgcattgca cgcttatcac cagctttgcc gcatgatgtc gcgccagcga ttcagcatcg
     1681 tccagaatct tcgcctgccc attgatgcga acccgatagc tctgaccatc aaatttagcg
     1741 aacaacaagc caacgtttgg gttgcggctg atattgccca aagtgcggta catcgaattg
     1801 ccatcgtatt ccgggaactc gatcgtgccg ggaccgacaa tccgaacaaa ccctggcgca
     1861 ccggatcgca tgctgcaatc gacaaattcg ccgaacgagg tggctatgaa aaagtacgac
     1921 gcctgctcga tcatgcgccg gtcgtcgtcc cagaagtcgt gcctgacgcg gtgggcggcg
     1981 agcgcatctg ccacccgcct gccatcgaag cggtcctgca acgaccgcat gccgtcatga
     2041 tagaaaggac gtgattccac ggtgctttcc cccggctgtg atgccagggg aaagtttact
     2101 cgaccgtcac cgactttgcc agattgcgcg gctgatcgac atcggtgcct ttcagcacgg
     2161 ccacgtgata cgccagcacc tgcaccggaa ttgcgtaaag gatgggtgca acgaaaggat
     2221 ccacagccgg cagcaccaca gtctcggtgg caatgcccct caacttcgca gcccccgccg
     2281 catcgctgaa aacaatcacc tgaccgccgc gcgctgccgc ctcctgcagg ttcgacgcgg
     2341 ttttctcgaa cagaggtccg gacggcacga tggcaatcac cggcaccaaa ggatcgatca
     2401 gcgcgatcgg cccatgcttc atttcgccag cggcataacc ctcggcatgg atatagctga
     2461 tctccttcag cttcagcgcg ccttccaaag caatcgggaa acaattgccg cggccgagat
     2521 aaagcacgtc ccgagccttc gcgaccaacg cggcgatccg ttggatttcc gcatccttct
     2581 ccagcacctc ggcggcacgc gccggcactt ccagcaacgc gtgagtcatt gccgcctcct
     2641 gcgccgcgtc gatcgagccg cgtgcc
//
LOCUS       DATAVD010001090         3267 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2526096, whole genome shotgun sequence.
ACCESSION   DATAVD010001090 DATAVD010000000
VERSION     DATAVD010001090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3267
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2526096"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            593..1783
                     /locus_tag="VHX39_20820"
     CDS             593..1783
                     /locus_tag="VHX39_20820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3993620.1"
                     /translation="MTMANYESPWKVEDARIFQRTVRSFVETLLVPHLAEPPRQARPD
                     EDAWTAAATATWTADTWAKAGQAGLLLPDVPDDYGGGGGTFAHEAVVIEELSRAGAHI
                     GFGIQSIVAHYILAYGTEAQKQRWLPRMASGELIGAIGMTEPDAGSDLHAIRTTARKD
                     GEHYVINGAKTFITNGANANLVCLVVRTATDGPPARALSMVMLETEGLPGYRVGRPLH
                     KIGRHDQDTCELFFDGVRTPVGFLLGAGEGRALFQIMDQLRYERLSIALSAVAGAERA
                     VELTTSHAKERKISGKPLLDLQNTRFRLAECKTEAHIGRVFIDNCIEQFIAGRLDAVT
                     AAMAKYWLTDCECRIVDQCVQLHGGYGYMQEFPIARMWVDSRVQRIYAGSNEVMKEII
                     GSAL"
     gene            1780..>3267
                     /locus_tag="VHX39_20825"
     CDS             1780..>3267
                     /locus_tag="VHX39_20825"
                     /inference="COORDINATES: protein motif:HMM:TIGR01733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid adenylation domain-containing
                     protein"
                     /protein_id="HEX3993621.1"
                     /translation="MNATFLNPTPADAGVSRPHTGMSNLAHPGWQPHSEFPQVCGHEL
                     FESQVAHDPDAIALVFGQQRISYRDLNERANRVAHFLRRAGVGPNGLAGICLRRSPSM
                     VVAMLAVWKAGGAYVPMDPEYPPERLSFMIHDAQTRLLLTEETCRPLLNSFAGKAIYL
                     DTDRALLDLEPAANLAPLAEPADLAYVMYTSGSTGQPKGAMITHRGLVNYLWWAKDAY
                     RVEPGRSAPVHTSFSFDLTVTSLFTPLIAGGSAELLPEDVGAQQLVAALLRAGERSLL
                     KLTPSHLDLLSQQIGPEKLAGMARCLVIGGENLVAESLRVWREHAQETRLINEYGPTE
                     TVVGCCVHEVLPTDPVTGSVPIGRPIANTQLYVLDANLQPVADGETGELYIGGAGVGP
                     GYLNRPALTSERFLPDPFAEDPDARMYKSGDLARWRTDGILEYLGRGDDQVKIRGYRI
                     ELGEIEAAVAALPAVRSCAVAAREDETGKKRLVAYLVAQDGKTSTT"
BASE COUNT          623 a         1007 c         1018 g          619 t
ORIGIN      
        1 gcggtcgcag gcccttgcgt ctttggcgtg ttgccaatcc agccatgccg tggcgacaac
       61 tcagttccgc gccggtccgg tcgggacaag gccgagcgcc gaccctgggc ccgatctccg
      121 accctgcggt tcggcaaggc acggcaatcc acctctctgt tctggcatca gagtttgtat
      181 ggggcgcgtt cctaaatttg caatggtcga tttttttata tcttgtgtga gccaaatatc
      241 gtagataatt aacttattgg cgaggacgat tacgaactta tcgtgccgcg ttgggatccc
      301 gtgctgtcca ggattctccg cgctggcacg gaagctctga atatttagtg gcgggaatta
      361 tcccacatgg cgaccggcgg gcattctgca gcgagcaaaa ccagactgaa attatttcca
      421 ctttacggtg acggaaatga catcattgcg ggcgtggtgg ctccgctgtc cgctaagact
      481 tgcgtattgt ttcaaatttt gcactgaccg atttggccgg agctgatcag aagcagtctt
      541 gggcgactgt tcaaaaaacc catcccgatt gtccgactgg atcccaggca ccatgacgat
      601 ggccaattat gaatcacctt ggaaggtcga agacgcgcgc atttttcagc gcaccgtccg
      661 cagcttcgta gagactctgc tggtacctca cctggcggaa ccgcccagac aggctcgccc
      721 ggacgaggac gcctggaccg ctgcagccac cgcaacctgg accgccgata cctgggcgaa
      781 agcaggccag gccggattgc tgctgccgga cgtccctgac gactacggcg ggggcggcgg
      841 aaccttcgcc catgaagccg tcgtgatcga ggaactgtcg cgcgccggtg cccatatcgg
      901 tttcggcatc cagagcatcg ttgcccatta cattctcgcc tatggcaccg aagcgcagaa
      961 gcaacgctgg ctgccgcgga tggccagcgg cgaactgatc ggcgccatcg gcatgaccga
     1021 gcccgacgcc ggctcggatt tgcacgccat ccggaccacc gcccgcaagg atggcgagca
     1081 ttacgtcatc aacggcgcca agaccttcat caccaacggt gcaaacgcca acctggtttg
     1141 ccttgtggtg cgaactgcga ctgacggccc gccggcgcgc gcgctgtcaa tggtgatgct
     1201 ggaaaccgaa gggctgcccg gctaccgggt cggccgtccg ctgcacaaga tcggccggca
     1261 tgaccaggac acctgcgaac tgtttttcga cggtgtgcgc acgccggtcg gcttcctgct
     1321 cggcgcggga gaaggccgtg cgctatttca gatcatggac cagctgcgct acgaacggct
     1381 gtccatcgcc ctgagcgcag tggccggtgc ggaacgcgcg gttgagttga cgacgtcgca
     1441 cgccaaagaa cgcaagatat ctggcaagcc attgctcgac ctgcagaaca cgcgtttcag
     1501 gctggcagaa tgcaaaacgg aggcgcatat cggacgagtt ttcatcgaca actgcattga
     1561 acaattcatt gccgggcgcc tggatgcggt caccgcggca atggcgaagt actggctgac
     1621 cgattgcgag tgccgcatcg tcgatcagtg cgtccaatta catggtggat acggatatat
     1681 gcaggaattt ccgatcgccc gcatgtgggt cgatagccgc gtgcagcgaa tttatgccgg
     1741 ttccaacgag gtaatgaaag agatcatagg gagtgcatta tgaacgcaac attcctcaac
     1801 ccgaccccgg cagacgctgg agtgtccagg ccgcataccg gcatgagcaa cctcgctcac
     1861 ccggggtggc agccgcactc ggaattcccg caggtttgcg ggcatgaatt gttcgaaagt
     1921 caggtggcgc atgatcccga cgccattgcc ctcgtcttcg gccagcagcg gatcagctac
     1981 cgcgacctga atgagcgtgc caatcgcgtg gcgcatttcc tgcgccgcgc cggcgtcggg
     2041 ccgaacgggc tcgccgggat ctgtctgcgt cgctcgccgt cgatggtcgt cgccatgctg
     2101 gcggtttgga aggccggcgg cgcttacgtc ccgatggatc cggaataccc gccggagcgg
     2161 ctgtcattca tgatccacga cgcgcagact cgcttgctgc tgactgagga aacctgccgg
     2221 ccgttgctga attccttcgc cggcaaagcg atttatctcg ataccgaccg ggctttgctg
     2281 gatctggaac cggccgccaa cctggcgccg ctggccgagc cggccgatct ggcttacgtc
     2341 atgtacacct cgggttcgac cggccaaccg aaaggcgcga tgatcaccca tcgcggcctg
     2401 gtcaactatc tgtggtgggc caaggacgct tatcgggtcg aaccgggccg gtcggcgccg
     2461 gtccacacct cgttctcctt cgatctcacg gtcaccagcc tgttcacccc gttgatcgcc
     2521 ggcggcagcg ccgaattgct gcccgaggat gtcggcgccc aacaactggt cgcggcgttg
     2581 ctgagggccg gcgaacgcag cctgctcaaa ctgaccccgt cgcatctgga cctgctgagc
     2641 caacagatcg gtccggagaa gctcgccggc atggcgcgct gtctggtcat tggcggcgag
     2701 aacctggtgg cggaaagcct gcgcgtctgg cgtgagcacg cccaggagac acggctgatc
     2761 aacgagtacg gcccaaccga aacggttgtc ggctgctgcg tgcatgaggt gctgccgacg
     2821 gatccggtca ccggctcggt gccgatcggg cggccgattg cgaatacaca actgtatgtg
     2881 cttgacgcga acctgcagcc ggtggcggac ggcgagaccg gcgagttgta catcggcggt
     2941 gccggcgtcg gtcctggcta cctgaaccgg ccagcactca cctcggagcg gtttctgcca
     3001 gatccgtttg ccgaagatcc cgacgcgcgg atgtacaaaa gcggcgacct ggcgcgttgg
     3061 cgcaccgacg gcatcctgga atacctcggc cgcggcgacg accaggtcaa aatccgcggc
     3121 tatcgcatcg agcttggtga gatcgaggcg gcggtcgctg cgctgcctgc ggtgcgctcc
     3181 tgcgccgtgg cggcgcgcga agacgaaacc ggcaaaaagc gtctggtggc ttatctggtc
     3241 gcgcaggacg gaaaaacctc gaccacc
//
LOCUS       DATAVD010001091         4490 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_664302, whole genome shotgun sequence.
ACCESSION   DATAVD010001091 DATAVD010000000
VERSION     DATAVD010001091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4490
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_664302"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..1117)
                     /locus_tag="VHX39_20830"
     CDS             complement(26..1117)
                     /locus_tag="VHX39_20830"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3993622.1"
                     /translation="MLFSCLPEGARIPGRFPGPPHPRGKHFTVDIHCHLLTEKAETMF
                     KEAGLVDHRPRETFANPHTRDVNREQARRTRIQFLSIEKRLADMDLMGIDIQAITPAP
                     NQTFYDTPADFGIASARVINDNIADIVARHPDRFVGLGTVPFQAPELAVAELERLHRS
                     LGLRGIEIATNVAGADLSEDRFRPIFSKAEELGLTVFMHPTGFTEARRFGDHYFTNVI
                     GNPLDTTVAVHHLIFGGVLEACPHLKLVLSHGGGYLPAYSGRIDHAASARPDCCEVIH
                     EMPTTYLKRLYFDSLVYTHSQLEYLVREYGADHVLMGTDYPADMGEVDPVGFIEGSPG
                     LTAAERAAILGGNAARLLGLVTPANQSGS"
     gene            complement(1144..1902)
                     /locus_tag="VHX39_20835"
     CDS             complement(1144..1902)
                     /locus_tag="VHX39_20835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3993623.1"
                     /translation="MPLGPRSILVTGAASGIGAAICRTLAAPETSILIHTRRNQAGAE
                     QVAAEVRTTGSDAEIVLADLAHTDAAAAVVRAAITRFGRLDVLISNAGFADRTPFASL
                     SDSAMNGSIETIQGAFFRLARAAIPHLCEAEHPRIIAVSSFVAHTFRTNVATFPASAA
                     AKAGLEALVRALAVELGAAGVTVNAVVPGFIQKDAGAHRAIGPGVLTSQAEKIPLGRI
                     GLPGDVAAAVAFLASPEAGYITGQCLHVDGGLVI"
     gene            2094..3887
                     /locus_tag="VHX39_20840"
     CDS             2094..3887
                     /locus_tag="VHX39_20840"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IlvD/Edd family dehydratase"
                     /protein_id="HEX3993624.1"
                     /translation="MDASKSPHEKRLRSRRWFDDPADPAMTALYLERYMNYGITPDEL
                     RGGKPIIGIAQTGSDLSPCNRHHIELASRVRDGIRDAGGVPLEFPIHPIQETGKRPTA
                     ALDRNLAYLSLVEVLHGYPLDGVVLTTGCDKTTPACLMGAATVNIPAIVLSGGPMLDG
                     WWQGRLSGSGTIVWEGRKLFAEGKIGYDEFMQMVSSSAPSVGHCNTMGTATSMNSLAE
                     ALGMSLPGCAAIPGPYRERGWMAFETGKRIVGMVHENLRPSDIMTKQAFENAVVAAAA
                     LGASSNCPIHMVAIARHMGVEHSLDDWQRLGPEIPLLCDVQPAGRFLGEKFHRAGGVP
                     AVMKELLKSGKLHADAMTVTGKTIAANLENVPDGDREVIRSYGKPLLEAAGYVVMSGN
                     IFTSAVMKISVIDKDFRARFLSNPERPNVFEGKAIVFEGPEDYHHRIEDPSLGIEEQS
                     VLIIRNCGPVGYPGSAEVVNMQPPAALMKQGVMTLPTMGDGRQSGTSGSPSILNISPE
                     AVTGGGLALLQTGDRIRIDLNQRKVDVLLPPGELEARRAAWTPPKLVNMTPWEEIYRS
                     MVGQMSTGACLEPATLYLNVIETRGESRNNH"
     gene            4064..>4490
                     /locus_tag="VHX39_20845"
     CDS             4064..>4490
                     /locus_tag="VHX39_20845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993625.1"
                     /translation="MRNIAAWLARRLPIAGIALCGAMQVQAATIGVPENLGPWGISPT
                     LPDDQRGIYVNLAEAIATHTSVPIEIKFVPYGRMLQLVRTGELDYAFGVVGPATSDAG
                     KFTTIVGKVPMVAVGRKGLTLKSLTDLHQFSEVGYLRGGS"
BASE COUNT          877 a         1414 c         1396 g          803 t
ORIGIN      
        1 ccgtggttct ttgcccgagt acgtcttatg aacccgactg gtttgcgggt gtaaccaaac
       61 ctaacaggcg tgcggcgttg ccgccaagaa tagccgcccg ctcggctgcg gtgagaccgg
      121 gagagccttc gataaaaccg accggatcga cctcacccat gtcggccgga taatcggtgc
      181 ccatcagcac atggtcggcg ccgtattccc gcaccagata ttcaagttgt gaatgcgtat
      241 agaccagcga atcgaaatac agccgtttca gatacgttgt cggcatctca tggatcacct
      301 cgcagcagtc cggccgagcc gacgccgcgt gatcgatacg gccggaatag gccggcagat
      361 agccgccgcc atgcgacagc acgagcttca aatgcggaca cgcctccagc acgccgccaa
      421 agatcaggtg atgcaccgca actgtcgtat ccaacggatt accgatgaca ttggtgaaat
      481 agtgatcgcc gaagcgccgc gcctcggtaa aaccggtcgg gtgcatgaac acggtcagac
      541 cgagttcctc ggctttgctg aaaatcggcc ggaagcggtc ctcggacagg tcggcgccgg
      601 cgacgttggt ggcgatctcg atcccgcgca gaccaagcga gcgatgcagc cgttccagtt
      661 cggcaaccgc aagttccggc gcctggaacg gcaccgttcc gaggccaacg aaacgatccg
      721 gatgccgcgc cacgatgtcg gcgatgttgt cattgatcac ccgtgccgag gcgatgccga
      781 aatccgccgg cgtatcgtaa aacgtctggt tcggcgccgg agtgatcgcc tgaatgtcga
      841 tccccatcag gtccatgtcg gcaagtcgtt tctcgatcga cagaaactgg atacgcgtcc
      901 ggcgcgcctg ctcgcggttc acatctcgcg tgtggggatt ggcaaaagtc tcgcgcggcc
      961 ggtgatcaac gaggccggct tccttgaaca tcgtctcggc tttttcggtc agcagatgac
     1021 agtgaatgtc cacggtaaaa tgcttgccgc gcgggtgcgg cgggccgggg aagcggccgg
     1081 ggatgcgagc gccttccggc agacaactga acagcatttt gtttacctcc cgttattgag
     1141 cggtcagatc accagaccgc catcgacatg tagacactgg ccggtgatat agccggcttc
     1201 cggtgaagcc agaaaggcca cggccgcagc aacatcgcct ggcagcccga tgcggccaag
     1261 cgggatcttt tccgcctgtg aggtcagcac gccgggtccg atcgcccggt gcgcgccggc
     1321 atccttttga atgaagcccg gcacgacagc gttcacggtc acacccgccg cgccgagttc
     1381 aaccgcgagg gcccggacca atgcctccag gccggccttt gccgcggccg aggccgggaa
     1441 cgttgcgaca tttgtacgga acgtgtgcgc aacgaagctg gataccgcga tgatgcgggg
     1501 atgctccgct tcgcacaaat gcggaatggc cgcacgggcc aggcggaaga acgccccctg
     1561 aatagtctcg atcgagccgt tcattgcgct atcggacagg ctcgcgaacg gcgtgcgatc
     1621 ggcgaacccg gcattggaga tcagcacgtc gaggcggccg aaccgtgtga ttgccgcccg
     1681 cacgacagcg gcggcagcat ccgtgtgcgc caaatccgcg agaacgattt cggcgtcgga
     1741 acccgttgtg cgaacctcgg cggccacctg ctcggcgccc gcttggttgc ggcgggtgtg
     1801 gatcaggatc gacgtctcag gcgcagcgag agttcggcag attgccgcgc caatgccgct
     1861 ggccgcgccg gtgaccagaa tactgcgggg accgagtggc atcttgggct caggacctca
     1921 acttgatttg cggcgttggc gtcgtaacac gggcattcgc cgcaggccat tgccggcaac
     1981 gatcgttgcc caagccgcgc cagcgtagcc ggccgatgga ccgaagccgt cttgacccgg
     2041 caggccggcc ccaacagtct ccgcctcgcg cactgcacgg gaggaaccga ccgatggacg
     2101 caagcaaaag cccacatgaa aaacgcctgc gttcccggcg ctggttcgac gatccggccg
     2161 atccggcgat gactgcgctg tacctcgagc gctacatgaa ctacggcatt acgcccgacg
     2221 agttgcgcgg cggcaagccg atcatcggca tcgcgcagac cggctccgat ctgtcgccct
     2281 gtaaccgcca tcatatcgag cttgcatccc gcgtacgcga cggcatccgc gacgccggcg
     2341 gggtgccgct ggaattccca attcatccca ttcaggaaac cggcaaacgt cccactgctg
     2401 cgctggaccg caacctcgct tacctctccc tggtcgaggt gctgcatggc tatccactgg
     2461 acggtgtcgt gctgaccacc ggctgcgaca agacgacgcc ggcctgtctg atgggcgccg
     2521 cgacggtcaa cattccggcg atcgtgctgt ccggcggccc aatgttggac ggctggtggc
     2581 aaggccggct gtccggctcc ggcaccatcg tgtgggaggg tcgcaagtta tttgccgaag
     2641 gcaagatcgg ctatgacgaa ttcatgcaga tggtgtcgtc ttcggcgcca tcggtcggtc
     2701 attgcaacac catgggcact gcgacctcaa tgaactctct ggccgaggca cttggcatgt
     2761 cactgccggg ttgcgccgcc attccaggtc cgtatcggga gcgcggctgg atggcgttcg
     2821 aaaccggcaa gcgcatcgtc ggcatggtgc acgagaatct ccgcccctcc gacatcatga
     2881 ccaaacaggc gttcgagaac gcggtcgtgg ccgccgccgc cctcggagcg tcatcgaact
     2941 gtccgatcca catggtcgca atcgcgcgtc atatgggcgt cgagcattcg ctggatgact
     3001 ggcagcggct cggcccggag attccgctgc tgtgcgacgt gcaaccggcc ggccggttcc
     3061 ttggggaaaa attccatcgc gcgggcggtg tgccggcagt catgaaggaa ttgctgaagt
     3121 ctggcaaatt gcacgccgat gcgatgactg tcaccgggaa aaccatcgcg gccaacctgg
     3181 aaaacgtgcc ggacggcgat cgcgaggtga tccgctccta tggcaaacca ctgttggagg
     3241 ctgccggtta tgtggtcatg tccggcaaca tcttcaccag cgcggtgatg aaaatcagcg
     3301 tcatcgacaa ggattttcgg gcgcgcttcc tgtccaaccc ggagcggccg aacgtgttcg
     3361 aaggcaaagc catcgtcttc gagggccccg aggactacca ccaccggata gaagatccct
     3421 cgcttggcat tgaagaacag tcggtgctga tcatccgcaa ttgcggtccc gtcggttatc
     3481 ccggcagcgc tgaggtcgtg aacatgcagc cgcccgccgc tttgatgaag caaggcgtga
     3541 tgacgttgcc gaccatgggg gacgggcggc aatcgggcac ctcgggctcg ccgtcgatcc
     3601 tgaacatatc gcccgaggcg gtgaccggcg gcggcctcgc gttgttgcag accggcgatc
     3661 gcatccggat cgatctcaat caacgcaagg tcgacgtgct gctgccgcca ggcgaactgg
     3721 aggcacggcg ggccgcctgg acaccgccaa aactggtgaa catgacgccc tgggaggaga
     3781 tctatcgttc catggtcggc cagatgagca caggtgcctg cctggaaccg gcgaccttgt
     3841 acctgaatgt gatcgaaacc cgcggcgaat cgcgtaacaa ccactgaggc cagcgcgacc
     3901 atgcaatctc cgtcccgacc gggattgctt cgctgcactc acaacgacac acactccgcc
     3961 cgcaaaactt gcagtgccgt ttaccgcttc ttaagcggtc acccttatgc ctcacaccag
     4021 cgaccgccgt cccggcgcag cgtgcgaaag gtgaggcatg accatgagaa acatcgcagc
     4081 ctggttggcg cgacgactgc ccattgccgg cattgcgctg tgtggtgcca tgcaggtcca
     4141 ggccgccacc atcggcgtgc cggaaaacct cggcccctgg ggcatcagtc ccaccctgcc
     4201 ggacgaccaa cggggcattt atgtcaatct ggccgaagcg attgcgaccc acacatccgt
     4261 tccgattgaa atcaaattcg taccgtacgg tcgtatgctg cagttggtgc gtaccggcga
     4321 attggattat gcgttcggcg ttgtcgggcc cgcaacctcg gatgccggta aatttaccac
     4381 gatcgtcggc aaggtgccga tggtggcggt cggccgcaaa ggcctgacgc ttaagagcct
     4441 gaccgatctg caccagttca gcgaggttgg ctacctccgc ggcggcagtt
//
LOCUS       DATAVD010001092         3966 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2526241, whole genome shotgun sequence.
ACCESSION   DATAVD010001092 DATAVD010000000
VERSION     DATAVD010001092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3966
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2526241"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..779
                     /locus_tag="VHX39_20850"
     CDS             <1..779
                     /locus_tag="VHX39_20850"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3993626.1"
                     /translation="QPPNMRAGVQAEIAHAARISILGELAASIVHEVSQPLTAIESNT
                     AASLLWLAYSPPNIEAVRELAARTAAEVQRAADIIHRIRSMVLRTNPEQESTAINPMI
                     EEAVLFLRHELQHKLVETSLQLSPGLPTVLGDRVQLQQVIINLAVNAIQAMAAVGGTE
                     RELVIRTATTPERDVLIEVEDTGPGIAHDVLGRLFESFFSTKATGIGMGMGLAICRSI
                     IEAHGGRIAAANRGDRAGARFSVLLPIPPAAETAQQPAPI"
     gene            complement(1267..1683)
                     /locus_tag="VHX39_20855"
     CDS             complement(1267..1683)
                     /locus_tag="VHX39_20855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organic hydroperoxide resistance protein"
                     /protein_id="HEX3993627.1"
                     /translation="MPSYTASATTEGGRNGHVKSSDGLIQYDLSVPKEIGGPGRAGTV
                     NPEEFFAAGYSACFGSAVDYAAKLEKVHIDGVTVTADVTVNADNTGFNLAVTLKTHVA
                     GVDHATAERLAHKAHNELCPYSKATRNNIPVQIEII"
     gene            2035..2670
                     /locus_tag="VHX39_20860"
     CDS             2035..2670
                     /locus_tag="VHX39_20860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004272811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HEX3993628.1"
                     /translation="MAESGLVHIIDDDDAVLGGLGSLVRSVGNDARLYRSTSEFLGRE
                     LPPIASCLLLDVRLPGTNGLDFQASLLKLGIFLPVILMTGYGDIQMSVRGMKAGAIDF
                     LTKPVRHQDVLDAVSAALSRDRARRVEDAEISAIRRRYETLTPRELQVIALVTAGKMN
                     KQMAGELKLSEITVKIHRGAVMKKMGARSLADLVKMAETLRLAGPGPYPDA"
     gene            2831..3196
                     /locus_tag="VHX39_20865"
     CDS             2831..3196
                     /locus_tag="VHX39_20865"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3993629.1"
                     /translation="MKDAVISVIDDDEAARSAVAALMRAKGFSVCAYDSAEDFLQTAG
                     HESSQCIITDIQMPGLSGIELKQRLDAENCKTPVIMITARVEQRLLTLALASGAFCLL
                     RKPFKAIVLIECVQRALAG"
     gene            3301..>3966
                     /locus_tag="VHX39_20870"
     CDS             3301..>3966
                     /locus_tag="VHX39_20870"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX3993630.1"
                     /translation="MDIVDLVEESVAVFGLDMRVTAWNTEAERLYGWKREEVVGGAIQ
                     AAVRCSPSEPLRVIVARVYEAGMWRGEFVRTTKSGDTVVVRAKWTLRRDSHGRPVDIV
                     ETSRDITETRRTEDALDQLRYQYENLFQASVASFWELDLSEVGNMARTLQQSGVSDLR
                     QHFRSNPEYVRRMIRATRIVDVNEQSLSMFGNGNRGEVLRALDPLWPDESLGVFAESV
                     AAAF"
BASE COUNT          782 a         1163 c         1251 g          770 t
ORIGIN      
        1 tgcagccgcc aaacatgcgg gcgggcgttc aggcggagat agcacatgca gcgcgcatct
       61 caattctggg ggaactcgcg gcgtcgatcg tacatgaggt cagccagccg ctgaccgcga
      121 tcgagagcaa cactgcggcg agcctgctat ggctcgcgta ttcgccccca aatatcgagg
      181 cggtgcgcga actcgcagcg cgaacggcgg ccgaggtgca acgcgcggcc gatatcatcc
      241 accgcatccg atcgatggtg ctccgcacga atccggagca ggaaagcacc gcgatcaatc
      301 cgatgatcga ggaggcggtg ctttttctgc ggcacgaact ccaacacaaa ctggtcgaga
      361 cgtcgctgca actcagcccc ggcctgccga ctgtgctcgg cgaccgcgta cagctacaac
      421 aggtgatcat caacctggcg gtcaacgcga tccaggccat ggcagcggtc ggcggcaccg
      481 agcgggagct tgtgatcagg actgccacca cgcccgaacg tgatgttctg atcgaggtgg
      541 aggatacggg ccccggcata gcgcacgacg tcctcgggcg tctgttcgaa agcttcttct
      601 cgacgaaggc gactggcata ggcatgggta tgggtctagc catctgccgc tcgatcattg
      661 aagcgcacgg gggacggatt gccgccgcca accgggggga tcgcgcgggc gcacggttct
      721 ccgttctcct gccaattcca ccggcggccg aaaccgccca acagcctgcg cctatctagg
      781 cgggtcgcag gaaccagttc tacaagaccg gtcgcatcgg gcgctaggtt gttcgctggc
      841 cgagccaacg cgcgaggttg gtgacgtgga gatgtgtgtt ggccattgcc tgcggcgtcc
      901 gggcaatcgc ttctcccggc gactcgtcga caaagctcgg ggcacccagg caccggtttc
      961 ccaactgtag tcggtaaagt gaggactggg catcgcccat cccatttcac cgcgatttcc
     1021 gtcaccgcac tggtcatgtt atcgccctgg gcagggagcg gctgctcggc ggggaacagc
     1081 ccaggcggca cccggtaggc ggagcgtatt gaaacatgca gtgcgaacag gcactgccgc
     1141 gccgacgcaa gaccaacgcc atatcgcaga ccgacaacct cagcaggcgc gcgggaggtc
     1201 atgcccatgc gggtgggtag cgtccagccg atcacccgaa ttcggcagtc cggccggacg
     1261 caattctcaa atgatttcga tctggaccgg gatgttgttc cgtgtcgcct tggaatacgg
     1321 gcagagctcg ttgtgcgcct tgtgcgccag ccgttcggcg gtggcgtggt ccacaccggc
     1381 gacatgggtc ttcagcgtca cggccagatt gaagccggtg ttgtcggcgt tgacggtcac
     1441 gtccgcggtg accgtgacgc cgtcgatatg caccttctcc agtttggcag catagtcgac
     1501 cgcgctgccg aagcaggctg agtagccggc ggcaaagaat tcctccgggt tgacagttcc
     1561 ggcgcggccc ggaccaccga tctccttcgg caccgagaga tcgtattgga tcagcccatc
     1621 gctggatttg acgtggccgt tacggccacc ctcggtggtg gccgaggctg tatatgacgg
     1681 catgtatgat tcccttctaa gcaagcattt ttgccaaagc agcccgtcgg cccgcggatt
     1741 ggacggggcg agggaaccaa ggttcgattg cccgcatgtt cgacgttctc tgcgtccgct
     1801 gcgcacgcga ccgcgtgtcg acgacagcgc tgttcccggg cttcgcaatg tgcaacggag
     1861 cgctattgct gtgatgtcgt ccatcggagt ccggccactt cctgacccct gggtagacca
     1921 tggccgccac actcccatat gggaacccat acataggtat gaggaaggcc cggtacgacc
     1981 ggcggcacga accatgttct tgccgggcaa ggctacgcca agtagcgttg cgccatggct
     2041 gagtccggac tggtccatat catcgacgac gacgatgcag tactaggagg actgggaagc
     2101 ctcgtccgct ccgtaggcaa cgacgcgcgt ttatatcgtt cgaccagcga gtttctcggg
     2161 cgcgaacttc ctcccattgc ttcatgtctt ctcctagacg tgcgtcttcc agggaccaat
     2221 ggtctcgatt tccaggcttc cctcctcaag cttggaattt tcctaccggt catattgatg
     2281 acagggtacg gcgacatcca gatgtccgtg cgcggaatga aagccggggc catcgacttc
     2341 ctgacaaagc cagtccgaca tcaggacgtc ctggacgcgg tttccgccgc gctttctcgc
     2401 gatcgcgcgc gtcgcgtcga ggacgcggaa atctcggcga tacgccggcg atacgaaacc
     2461 ctcacgcctc gcgaacttca ggtcattgcc ctcgtgacgg cgggaaagat gaataagcaa
     2521 atggcgggcg aactcaagct tagtgagata actgttaaaa tccatcgcgg cgccgtcatg
     2581 aagaagatgg gagcccgttc gcttgccgac cttgtcaaga tggcggagac gttgcggctg
     2641 gctggtcctg gcccctatcc ggatgcctag aaacgccgga ttcatgccga tgccaacgcc
     2701 cgggagaata tgcaatttgg tggtgacggt agcacctacg tatggttttc gcccggttgt
     2761 ctgtgtgcga ttctcgccgt gacagttggt cgggtccgca gcgctggata tgccacagag
     2821 gacgacagtc gtgaaagacg cggtcatttc ggtcatcgac gacgacgagg cggcccgatc
     2881 ggccgtggcg gccctgatgc gggccaaggg attcagcgtc tgtgcctatg actcggcgga
     2941 ggacttcttg cagacagcgg gccacgaaag ttcgcagtgc atcatcacag acattcagat
     3001 gccggggcta agcggaatag aattgaagca acgactggac gccgagaatt gcaagacgcc
     3061 ggtcatcatg attaccgcca gggtcgagca gcgattgctc acccttgcac ttgcaagtgg
     3121 cgcattttgc ctgctgcgca agccgttcaa ggcaatcgtg ctgatagaat gcgtccagag
     3181 agccctcgcc ggatgagccg cgcttcatca acgcgttgaa cagggaactg tcccatggcc
     3241 gatcgctccc ctgaatgcgt gtccgaaagc gcccccccgt gttcgaaggt tcgcccagac
     3301 gtggacattg tcgatctggt cgaagaaagc gtggctgtat ttggcctcga catgcgcgtg
     3361 acggcctgga acaccgaggc ggagcggctt tacgggtgga aacgcgaaga ggtcgtcggt
     3421 ggggcgatac aggccgctgt ccgctgctcc ccctctgaac cgctgagggt gatcgtggcg
     3481 agggtatacg aagccgggat gtggcgagga gagttcgttc gcacgacgaa atccggcgat
     3541 acggtcgttg tccgggccaa atggaccctt cgccgggata gccacggacg gcccgtcgat
     3601 attgttgaaa cgagcaggga catcaccgag acgcgacgaa ccgaggatgc cctggatcag
     3661 ctacgatatc agtatgaaaa tctctttcag gcatcggtgg cgtcattctg ggagcttgat
     3721 ctttccgaag taggaaatat ggcgcggaca ctccagcagt cgggcgtgtc ggatctgcgg
     3781 cagcattttc gaagcaaccc ggagtatgta aggcgaatga tccgagcgac gcggatcgtg
     3841 gatgttaacg aacaaagcct ctcgatgttc ggtaacggca atcgcggtga ggttcttcgt
     3901 gctctcgatc cgttgtggcc agacgaaagt ctgggtgttt ttgccgagag tgtcgccgcc
     3961 gccttt
//
LOCUS       DATAVD010001093         7874 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3266615, whole genome shotgun sequence.
ACCESSION   DATAVD010001093 DATAVD010000000
VERSION     DATAVD010001093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7874
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3266615"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..613)
                     /locus_tag="VHX39_20875"
     CDS             complement(<1..613)
                     /locus_tag="VHX39_20875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3993631.1"
                     /translation="MSQSQVVAELAPHGVLRAAINMGNFLLVTGRTPSGDPDGCSPDM
                     ARAIAAKLGVPVQMVPYAKPGELADDAENDKWDIGLIGAEPARAEKIDFTAAYVEIEA
                     TYLVPAGSPIKSIAEVDVKGNRIAVTARSAYDLWLERNIHNATLCRGNSQTEVVEMFL
                     KDKMEALAGLRPGLVGEVAKIQGSRILDGQFSAVQQAIGTAKKN"
     gene            720..1706
                     /locus_tag="VHX39_20880"
     CDS             720..1706
                     /locus_tag="VHX39_20880"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase family
                     protein"
                     /protein_id="HEX3993632.1"
                     /translation="MSELPPAAILDALRRMNLAGATGGERLTGGVSSDIWRVDLPTGP
                     VCVKRALAKLRVAADWQAPVERNVFEARWMRHAGEYAPRLLGQDEQSGTLAMEFLAPE
                     DHPLWKNQLRDGIADAAFAARVAKALATIHAQTAANPGVAAEFPTDAIFYDIRLEPYL
                     VATARVHPDCAERLLALVATTQANKKALVHGDVSPKNILCGPSGPVFLDAECAWWGDP
                     AFDLAFCLNHLLLKCLWTPRAAEGFLQCFDALAAAYLRGVVWEAPGALEQRAASLLPG
                     LLLARVDGKSPVEYITGESQKDQVRRVARALLVDPPVRLAAIRTAWKKEIDA"
     gene            1703..2992
                     /gene="eno"
                     /locus_tag="VHX39_20885"
     CDS             1703..2992
                     /gene="eno"
                     /locus_tag="VHX39_20885"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEX3993633.1"
                     /translation="MTETSIAFVHARRVWDSRGRPTVEADVMLENGAVGRAIAPAGAS
                     TGSGEALELRDGGEAFGGYGVQQAVANVNGAICYAVTGMDAANQAALDARLIALDGTP
                     NKSRLGANAILSVSMAAAHAAAHAADLPLFRYLADTDVSLIPLPQVQIFGGGAHAGRR
                     VDIQDFMIMCPKAESFAQAMEWTAEVYRTAGRMMAEAGTLAGVADEGGWWPAFSTNEQ
                     ALDTLVRAIERAGFRPGEQVGIALDIAASEFGHDGRYKLALEDRELDSAGMIAMLSGW
                     VSRYPILSIEDPLAEDDREGFAEFTRLHGKSLQIVGDDFLVSDAARVRTAAAAGAANT
                     VLLKPNQCGTLTETLDAWEAAKQAGFAAIVSARSGETEDTTIVHLAVGWQVGQLKVGS
                     FARGERMAKWNEMLRVEEALGARARFAGGAVLGRSPA"
     gene            2989..3924
                     /locus_tag="VHX39_20890"
     CDS             2989..3924
                     /locus_tag="VHX39_20890"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HEX3993634.1"
                     /translation="MKVVYHAAAGPDLAARLASLPGLDIAICPDGDERRLASLLPECE
                     VLWHVLQRCTAETIAAAPKLRLIQKIGVGVNTIDLAAAKARGIPVCNLPGTNSRAVAE
                     LALALMLPVLRRVLRFDASLRSGVWTDLALQDGLGELGGRVVGLVGYGSVPRILAPVL
                     VAMGCEVVYTARHSVSDAAARFVSLRELLERSDVVSLHLPLTEETNRLIDRAAIAGMK
                     KGAILINTARGALVDETALADALRSGQLGGVGLDVFIEEPLPRDAALLALDNVVVTPH
                     VAWTTTGTFDRSFALAAENCRRIMAGTPLLHRVDT"
     gene            3938..4249
                     /locus_tag="VHX39_20895"
     CDS             3938..4249
                     /locus_tag="VHX39_20895"
                     /inference="COORDINATES: protein motif:HMM:NF018599.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1272 domain-containing protein"
                     /protein_id="HEX3993635.1"
                     /translation="MALQLRPNCEYCDKDLPPHATDARICTYECTFCADCVETKLFNV
                     CPNCGGGFERRPIRPATAWRPGLSVAQRPGSTQRVHLSHSREDIAEFSARMRSIDPAQ
                     R"
     gene            complement(4256..4846)
                     /locus_tag="VHX39_20900"
     CDS             complement(4256..4846)
                     /locus_tag="VHX39_20900"
                     /inference="COORDINATES: protein motif:HMM:NF017999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX3993636.1"
                     /translation="MPMHFEGEFRVPGKAEDVIRRFADVPRMARCMPGAVLEPQAEDG
                     SWPGAMVVSFGPKRINFKGKATCDFDYQALTGSVHGRGTADMRSARIGVKVAFALADV
                     ADSKPPETSVKIVSDAELGGVLEDFAKTGGIAVANVIMTDFARRAAEEFAKDAPPTET
                     AAAPAPLAAQGLLWVVIKAYWRRFLQAIGLAQQPSV"
     gene            complement(4847..6514)
                     /locus_tag="VHX39_20905"
     CDS             complement(4847..6514)
                     /locus_tag="VHX39_20905"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3993637.1"
                     /translation="MKVYEAIADCLLAEGCDNLFGLMGDGNMWLWSSLAKKQAKIISA
                     RHEAAAVSMADGYSRTTGKVGVAMVTCGPGLTQLGTVLMIAARNKSQLVVVTGEINPG
                     NKNKTQSMDQKRFTEACSARFHTVTSIDNMAEEIAEAFYTTRVHRVPVVLNLNMNLQD
                     EDFDWDFEYRPSTLFLPPRVENPSPDLLTPVIEKLAAAQRPVIIAGKGAIAAKAKDEI
                     IRLADRVGALLATSLQGKGYFAGHPWDIGIAGAFASEPSERLLADADFVLGVGAELGY
                     YTTEGGLLFPGAEVARIDIKPMPEEIGVIPGLYVQGDALKTVTSLNEALEGRQVRNEG
                     FRNAATRAVLDEPAHTWDAPKDGLDPRAVGGYLARGLPKGALVTCGAGHFFSFPAMYM
                     ALPEGAEIQFSYQFGAVGQGLPLAIGTGAGNPGRPHVAIEGDGSLLFHIQELDTVTRF
                     RMQMVLVVWNDGGYGAEVHKLLPKGFDWGQAHWDSPDFVAIAKAFGGDGVKLERESDL
                     PAAVTEGLRKGGLYLIDVRVSPTTTSDPHGKVYYGIPSKAPLLRPVA"
     gene            6634..7209
                     /locus_tag="VHX39_20910"
     CDS             6634..7209
                     /locus_tag="VHX39_20910"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEX3993638.1"
                     /translation="MSAALKPMTAEEFLAWEERQEERYEFDGFRPVAMTGGTFAHEVI
                     GGNIRSELDNRLRGSRCISLGPNMKIAVAGRFRYPDAVVVCSPVDRKATVITDPVIVF
                     EVLSDGTARIDQFDKLREYTATPSIIRYVILDQDTIGATVYARDGDRMVVETVARGGT
                     LRLPEIDVEVPVDDLYRGVEPDQPDVAAAPG"
     gene            complement(7226..>7874)
                     /locus_tag="VHX39_20915"
     CDS             complement(7226..>7874)
                     /locus_tag="VHX39_20915"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3993639.1"
                     /translation="KTGEGCRLQVAMQDAMMHYMRTNFATQARTGKAVERDGTRSGGG
                     SNAPSGLYPCAPGGLNDYVWIMTSRANPEHWDRLCKVMGREDLINDPRFSTPALRVKN
                     DPELDPIIREWTSTRTKHEAMALVGGAGIPAGAVLDTMELQNDPTFEQRGIMQVMEHK
                     SYTGYKMPSWPVRINGKPPRVKASPGLGEHTADVLTSWLGMSADQVGKLKANKIV"
BASE COUNT         1427 a         2401 c         2467 g         1579 t
ORIGIN      
        1 cgttcttttt cgccgtgccg atcgcttgct gcacggcgct gaactgaccg tccaggatcc
       61 gcgatccctg gatttttgcc acttcgccga cgaggcccgg ccttagtcct gcgagagctt
      121 ccatcttgtc cttgaggaac atctccacca cttctgtctg gctgttgccg cgacacagcg
      181 tagcgttgtg gatgttgcgt tccagccaca aatcataagc actgcgcgcg gtgacggcga
      241 tgcggttgcc tttgacgtcg acctcggcga tcgacttgat cggtgaaccg gcgggcacca
      301 gataggtcgc ctcgatttcc acatatgccg cagtgaagtc gatcttctcg gcacgagccg
      361 gttcggcacc gatcaggccg atgtcccact tatcgttttc ggcgtcatcg gccagctcac
      421 ccggcttcgc gtatggcacc atctgcaccg ggacgcccaa tttggcggcg atggcgcggg
      481 ccatgtcggg ggagcagccg tcgggatcgc cggacggcgt acgcccggtg acgaggagga
      541 agtttcccat attgattgcg gcgcgcagca ccccatgcgg tgcgagttcg gcgacgacct
      601 gtgattgaga catgcgttca cgtccaaggt tggttgagcg gaccaacgta tcttgtcgtg
      661 tgggtcatgg gcaacccggc caccttgacc acgcgcacga tccggcccct aaaaccggca
      721 tgtccgagct gccacctgct gccatcctgg atgcgctccg ccggatgaac ctggccggtg
      781 ccaccggcgg cgagcggctg accggcggcg tatcgtccga tatttggcgg gtcgatctgc
      841 caaccgggcc ggtttgcgtc aaacgcgccc tggcaaaact gcgagtcgcc gcggattggc
      901 aggcgccggt cgaacgcaat gtgttcgagg ctcgttggat gcgccacgcc ggcgagtatg
      961 cacctcggtt gctcggccag gatgagcaga gcggcacgct ggcgatggaa ttccttgcgc
     1021 cggaagatca tccgttgtgg aagaaccagt tgcgcgatgg cattgccgat gcggcattcg
     1081 cggcccgcgt ggccaaggca ctggcgacaa tccacgcgca gaccgccgca aatcctggag
     1141 ttgcggccga gtttccgact gacgcgatct tttacgacat aaggctggag ccttatttgg
     1201 tggcgaccgc gcgcgtgcat cctgattgcg cggagcggtt attggcgctg gtggcaacga
     1261 cgcaggccaa caagaaggcc ttggtgcacg gcgatgtcag tccgaagaac attttatgcg
     1321 gaccgtcggg tccggtgttc ctggatgcgg aatgtgcgtg gtggggcgat ccggcattcg
     1381 acctggcgtt ttgcctcaat catttgctgc tgaaatgcct ttggacaccg cgcgcggccg
     1441 agggtttcct gcagtgtttc gatgcgcttg cggcggcata tttacgcggt gtcgtgtggg
     1501 aagcgccggg cgcgctggaa cagcgggcgg cttcgttgtt acccggattg ttgctggcgc
     1561 gagtcgacgg caaatcgccc gtcgaataca tcaccggcga atcgcaaaag gaccaggtgc
     1621 ggcgtgtggc tcgcgcgttg ctggttgatc ctccggttcg cctcgcggcg attcgaacgg
     1681 cctggaagaa ggaaatcgac gcatgaccga aaccagcatt gccttcgtgc acgcgcgccg
     1741 ggtctgggac agtcgcggcc ggccaacggt tgaggccgac gtgatgctgg aaaacggtgc
     1801 ggtgggacga gcgattgcgc ccgccggtgc ctcgaccggc agcggcgagg cgttggaatt
     1861 gcgcgatggc ggcgaggcgt ttggcggata tggcgtgcag caggcggtgg ccaacgtgaa
     1921 cggcgccatc tgctatgccg tcaccggcat ggatgctgcg aaccaggcgg cgctcgatgc
     1981 ccggctgatc gctttggacg gcacgccgaa caagagccgg cttggtgcca acgccattct
     2041 gtcggtgtcg atggctgccg cgcacgctgc cgcgcatgcc gcagacctgc cattgtttcg
     2101 ctatctggcc gataccgatg tgtcgctgat ccccttgcca caagtccaga tatttggtgg
     2161 aggtgcgcat gcaggtcgca gggtggacat tcaggatttc atgatcatgt gtccgaaagc
     2221 ggaaagcttc gcacaggcca tggagtggac ggcggaggtg taccgcaccg cgggcaggat
     2281 gatggcagaa gccgggactt tggcaggtgt cgcggacgaa ggcggctggt ggccggcgtt
     2341 ctcgaccaat gaacaggcgt tggacactct ggtccgcgcc atcgaacgcg ccggcttccg
     2401 gccaggcgag caggtcggga ttgcgctgga tatcgcagcc tcggagttcg gccatgacgg
     2461 acgttacaag ctggcgctgg aggatcggga actcgacagt gccggcatga tcgcgatgtt
     2521 atcgggttgg gtttcccgat atccgatcct gtcgatcgaa gatccgctgg cggaagatga
     2581 ccgcgaaggg ttcgcggaat tcacccggct gcatggcaaa tcgttgcaga ttgttggcga
     2641 tgattttctg gtcagcgatg ccgcgcgggt gcgtactgcc gccgccgccg gtgccgccaa
     2701 taccgtgctg ttgaaaccca accaatgcgg cacgctgacc gaaacgctcg acgcctggga
     2761 ggctgcaaag caagccggat ttgctgcgat cgtgtcggcc cgttcaggcg agaccgagga
     2821 cacgaccatt gttcacctcg cggtcggatg gcaggtcggg caattgaaag tcggtagttt
     2881 tgcgcgcggt gaacggatgg caaaatggaa cgaaatgctg cgggttgaag aagcgctggg
     2941 cgcgcgggcc aggttcgccg gaggtgcggt attgggacgc tcgccggcat gaaggtagtt
     3001 tatcacgccg ctgccggccc ggatctggcg gcgcggctgg cgtcgttgcc tggattggac
     3061 atcgcgattt gtcctgacgg cgacgagcgg cgccttgcat cgctgctgcc ggagtgtgag
     3121 gtgctgtggc acgtgctgca acgttgcact gcggagacga tcgcggcggc gccgaagctg
     3181 cggctgatcc agaagattgg cgtcggggtc aatacgatcg atctcgctgc agcaaaggct
     3241 cgaggtattc cggtctgcaa cctgcccgga acgaattcgc gggcggtggc ggagctggcc
     3301 ctcgctttga tgctgccggt tctgcgtcgt gtgcttcgtt tcgatgcgtc gttgcgctcg
     3361 ggcgtttgga ccgatctcgc gttgcaagac ggtttgggtg agcttggcgg gcgcgtggtt
     3421 ggactggtcg gctatggatc agtgcccagg atattggcgc cggtactggt ggcgatggga
     3481 tgcgaggtgg tttacaccgc acgccattcc gtgtcggatg ccgccgcgcg gttcgtttca
     3541 ttgcgcgaac tgctggaacg atccgatgtg gtcagcctgc atttgccgtt gacggaggaa
     3601 accaaccggt tgatcgaccg tgccgccatc gctgggatga agaaaggcgc cattctgatc
     3661 aataccgcgc gcggagcttt ggtcgatgaa acggcactgg cggatgcatt gcgatccggt
     3721 cagcttggcg gtgttggtct ggatgtattt atcgaggaac cgttgccgcg cgatgcggcg
     3781 ttgttggcat tggacaacgt ggtggtcacg ccgcatgtcg cctggaccac aaccggaacg
     3841 ttcgaccgca gcttcgcgct tgccgcggag aactgccgcc gtataatggc agggacgccg
     3901 ttgttgcacc gcgttgatac ctgaggaaat tctgattatg gctctgcaac ttcgaccgaa
     3961 ttgcgagtat tgcgataaag atctgccacc gcatgcaacc gatgcacgga tttgcacgta
     4021 tgagtgcaca ttttgcgccg actgtgtcga aacgaaacta ttcaacgtgt gcccgaactg
     4081 cggtggcgga ttcgaacgac ggccgatccg tccggcgacc gcatggcgtc cgggtctgtc
     4141 ggtcgcgcaa cgcccaggat cgacgcagcg tgtgcatttg tctcacagcc gagaggatat
     4201 cgcggaattt tctgcgcgga tgcgatcgat cgacccggca caacgctaga gttgatcaca
     4261 cggacggttg ttgcgcgagt ccgatcgcct gcaagaaccg gcgccaatag gctttgatca
     4321 ccacccaaag caacccttgt gcggccaatg gggcaggtgc cgccgccgtt tcggttggcg
     4381 gcgcatcctt ggcaaactcc tccgccgcgc ggcgagcgaa atccgtcata atgacattcg
     4441 cgacagcgat acctccggtt ttggcaaaat cctcgagcac gccaccaagt tcggcatctg
     4501 aaacgatttt gacggaggtc tccggcggtt tgctgtcagc aacgtcagcc agcgcaaacg
     4561 ccactttgac gccgatgcgg gcggatcgca tatccgccgt gccgcggccg tgcaccgatc
     4621 cggtcaacgc ctgataatcg aagtcgcagg ttgccttgcc cttgaaatta atccgttttg
     4681 gcccaaacga caccaccatc gctcccggcc acgaaccatc ctcggcctgg ggttccagca
     4741 cggcacccgg catgcagcgc gccatcctcg gcacgtcggc aaatcgccgg atgacgtcct
     4801 cggctttgcc gggaacccgg aactcacctt caaaatgcat cggcatttag gcaaccggac
     4861 gcagcagcgg cgccttgctg ggaatgccgt aatacacctt gccatgcgga tcgctggtcg
     4921 tggtcggcga tacccgcaca tcgatcaaat agaggccgcc tttgcgcagg ccttcggtca
     4981 ccgccgcagg cagatcggac tcgcgttcca gcttcactcc atcgccgcca aatgctttcg
     5041 cgatcgcgac gaaatccggc gagtcccaat gcgcctgccc ccaatcgaac cccttgggca
     5101 gcagcttgtg cacctcggcg ccgtagccgc catcgttcca gacgaccagc accatctgca
     5161 tcctgaagcg cgtaacggta tcgagttcct gaatgtggaa cagcaaactg ccatcgccct
     5221 cgatcgcaac atgcggccga cccgggttgc ccgccccggt accaatggcg agtggcaacc
     5281 cctgacccac cgcaccgaac tgataggaaa actggatttc tgcgccctcc ggcaacgcca
     5341 tatacatcgc cgggaacgag aagaaatggc cggcaccaca ggtgaccagc gctcccttcg
     5401 gcaatccgcg cgccagataa ccaccgacgg cgcgtggatc gagcccatcc ttcggcgcat
     5461 cccacgtgtg cgccggttca tccagcaccg cccgggtcgc cgcattccga aagccttcgt
     5521 tgcgtacctg acgaccttcc agcgcctcat tcaggctggt aacggtcttc agggcatcgc
     5581 cttgaacgta caggccagga atgaccccga tctcctccgg catcggtttg atatcgatac
     5641 gggcgacctc ggcgccgggg aacaacaggc cgccctcggt cgtgtagtag ccaagttctg
     5701 caccgacccc gagaacgaag tctgcgtcag ccaacaatcg ttccgatggt tccgatgcaa
     5761 aggcgccggc aatgccgata tcccacgggt gaccggcgaa atagcccttg ccctgcaaag
     5821 atgtcgccag cagcgcaccg acccggtcag ccagccgaat gatctcgtct ttggccttcg
     5881 cggcaatggc acccttgccg gcgatgatca ccggccgttg cgcggcggcc agcttctcga
     5941 tcaccggtgt cagcagatca ggacttggat tttccacccg cggcggcagg aacaacgtcg
     6001 agggccgata ctcgaagtcc cagtcgaagt cttcgtcctg caggttcatg ttcaaattca
     6061 gcaccaccgg cacgcgatgc acgcgggtgg tgtaaaacgc ctcggcgatt tcctccgcca
     6121 tgttgtcgat gctggtcacg gtgtggaacc gcgccgagca ggcctcagtg aagcgcttct
     6181 ggtccatcga ctgcgtcttg ttcttgttgc ccgggttgat ctcgccggtg accaccacaa
     6241 gttgcgactt gttgcgggcg gcgatcatca gcacggtccc gagctgggtc agccctgggc
     6301 cgcacgtcac catcgcgacc ccgaccttgc cggtggtccg ggaatagccg tcggccatcg
     6361 acaccgccgc tgcctcatgc ctggccgaga tgatctttgc ctgcttcttc gccagcgagg
     6421 accacagcca catgttcccg tcgcccatca ggccaaacag gttgtcacac ccttctgcca
     6481 gcaggcagtc ggcgatggct tcatagactt tcatgggcgt tgatcccctt ggctgctcgt
     6541 agcggtcact ctttgtttca gatgaccggc ggctcgtcca gaggcgggcc agccaggcct
     6601 gacgcgaatg gcgcagcgtg ttatacatga cgcatgagcg ctgcgctgaa accgatgacg
     6661 gccgaggaat tcctggcgtg ggaagagcgt caggaagaac gatacgagtt cgatggattc
     6721 cgcccggtcg caatgaccgg aggcaccttc gcgcacgaag tcattggcgg taatattcga
     6781 agcgaactcg ataacaggtt acgcggctct cgctgcatct cgcttggccc gaatatgaag
     6841 atcgccgtgg ccggccggtt ccgttatcct gacgcggtcg tcgtttgttc accggtcgat
     6901 cgaaaggcaa ccgtcatcac tgacccggtc attgtattcg aagtactgag cgacggcacg
     6961 gcgcgcatcg atcaattcga taaactccgt gaatataccg cgacaccgtc gattatccgt
     7021 tatgtgatcc tggaccagga tacaattggc gcgaccgtct atgcccgtga cggcgatcgg
     7081 atggtggttg agacggtcgc gcgcggcggc actttgagac tgccggaaat tgacgtggag
     7141 gttccggtcg acgatcttta tcgcggagtt gagccggatc aaccggacgt cgccgcggcg
     7201 cccggttgat tttatcctga cccgatcaaa cgatcttgtt ggccttcaac ttgccaacct
     7261 gatccgcact catcccaagc caactggtca acacatccgc cgtatgctcg cccaacccgg
     7321 gcgacgcctt cacccgcggc ggcttgccgt tgatgcgcac cggccaggac ggcattttgt
     7381 atccggtgta actcttgtgt tccatcacct gcatgatgcc gcgttgttcg aacgtcggat
     7441 cgttctgcaa ctccatcgta tcgagcactg cgccggccgg aatgccggca ccgccgacca
     7501 gcgccattgc ctcatgcttg gtcctcgtgc tggtccattc ccggatgatc ggatccaact
     7561 ccggatcgtt cttcacccgc aacgccggcg tcgagaaacg cggatcattg atcagatcct
     7621 cgcggcccat caccttgcac agccggtccc aatgctcggg attggcgcgg ctggtcatga
     7681 tccagacgta atcgttcaat ccgcctggcg cgcagggata cagccccgac ggcgcattcg
     7741 agccgccacc ggaacgcgtg ccgtcccgct ccaccgcctt gccggtacgc gcctgggttg
     7801 cgaaattggt gcgcatgtag tgcatcatcg cgtcctgcat cgccacctgc aaacggcagc
     7861 cctcgccggt cttg
//
LOCUS       DATAVD010001094         2281 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3081800, whole genome shotgun sequence.
ACCESSION   DATAVD010001094 DATAVD010000000
VERSION     DATAVD010001094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2281
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3081800"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1725
                     /locus_tag="VHX39_20920"
     CDS             <1..1725
                     /locus_tag="VHX39_20920"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3993640.1"
                     /translation="NAALQFATGGVVLYLNNDAELAPGAIAAALHRLETDPKVGAVGG
                     LILRTNGLVQEAGNIIYCDGSTLGYGRDATPLTPEMNFSRDVEFCSGVFLMARRSLLN
                     QLGGFDEAFVPAYYEDADLCLRIRQAGYRVIYDPAVVVHHLEYGSAVSNRASEAAIGR
                     ARQIFAEKHAAYVSGRPPRDERRQVFDRMADTHRKRLLFVEDTVPLRMIGSGFVRSND
                     IVREMASLAYAITVYPINGCPFDLASVYSDMPDGVEVMHDCSTEQFQAFLALRRGYYD
                     TIWVARTHNLGTVRAALEQVSLDPETGEPAGMPPVVLDTEAIASLRACGQAGLTGQSF
                     DLDTAIRSELRDGRFCSTIVATNDLEASVLRDLEFPNVVVIGHVREPRATLLPFPQRA
                     GMLFVGAIHRMDSPNYDGLCWFIDEVVPLIERELAWETRLTVVGYTGAEVSLDRFRDH
                     PRVTLRGSVSDLEPLYDQHRVFVAPTRFAAGMPYKVHEAASFGLPVVATELLRRQLGW
                     TDGNELLAAEATDPAAFARHVVALQRDEGLWHCLRDSALHRLHRDNNRADYAAAISGV
                     LGPPHSDR"
BASE COUNT          420 a          624 c          739 g          498 t
ORIGIN      
        1 aacgcggcac tccaattcgc caccggtggg gtagtacttt acctgaacaa tgatgccgaa
       61 ctcgccccgg gtgcgatcgc cgctgcgcta catcggttgg agacggatcc aaaagtcggt
      121 gcagtcggcg gcttaatcct acggaccaat ggtctggttc aggaagccgg gaacattatt
      181 tattgcgacg ggtcgaccct tggctatggg cgtgatgcca cgccgctgac acccgaaatg
      241 aatttctcgc gcgacgtaga gttttgttcc ggcgtctttc tgatggcccg ccggtcgctg
      301 ctgaaccagc ttggcggctt cgatgaagca ttcgtgccgg cttattacga ggatgcggat
      361 ttgtgtttgc gcattcggca agctggttac cgagtgattt atgaccctgc tgtggtcgtg
      421 catcaccttg aatacggcag tgccgtcagc aatcgagcct cggaggcggc gattggtcgc
      481 gcccggcaaa tcttcgcgga aaaacacgcg gcttatgtct ccggacgccc gccgcgtgac
      541 gagcggcgtc aggtgttcga ccgcatggcc gacacgcacc gaaagcgctt gctgtttgtt
      601 gaggatacgg ttccgctgcg gatgatcggg tcgggtttcg tacgttcgaa tgacattgtg
      661 cgagagatgg cgagcctggc ctatgccatc acggtctatc cgatcaacgg ctgcccgttt
      721 gacctggcaa gcgtgtattc cgacatgccc gatggtgtcg aagtcatgca cgattgttcg
      781 acggaacaat ttcaggcgtt tttggcgctg cggcgcggtt actacgacac gatctgggtc
      841 gcgcggacgc ataacctcgg gacagtccga gcagcgttgg agcaggtttc gttagacccg
      901 gagactggcg agccggcagg tatgccgcca gtggttttgg ataccgaggc gatcgcgtca
      961 ctgcgggcat gtgggcaggc tggtttgacg ggacaatcgt tcgacctcga cactgcgatc
     1021 aggtcggagc tgcgggatgg ccggttttgc tccacgattg ttgccaccaa cgacctggaa
     1081 gcgtcggttt tgcgcgatct ggaatttcca aacgttgtcg tgatcggaca tgtgcgggaa
     1141 ccgcgcgcga cgcttctgcc atttccgcaa cgcgccggca tgttgttcgt gggcgcgatc
     1201 catcgcatgg acagcccgaa ctacgacggt ctgtgctggt tcatcgatga ggtcgtgcca
     1261 ctcatcgagc gggaactcgc ctgggaaaca cggctcacgg tcgttggcta caccggggca
     1321 gaagtgagtc tggatcggtt ccgtgaccac ccgcgggtca cgctgcgtgg atcggtcagc
     1381 gaccttgaac ccttgtatga ccagcatcgc gtgttcgtcg cgccgacccg gttcgccgcc
     1441 ggaatgccat acaaggttca cgaagctgca tcgttcggtt tgccggtggt ggcgaccgaa
     1501 ttgctacgcc gccagcttgg ctggacggac ggaaacgaac tgctggcggc cgaggccacc
     1561 gacccggcgg catttgcccg tcacgtggtg gcgttacagc gggacgaggg actgtggcac
     1621 tgcctgcgtg attcagcgtt gcaccggctg catcgagaca acaatcgggc ggattacgcg
     1681 gcggcgatca gtggcgtgct tggtccgcca cactcagacc ggtgacctgc gcggcaatcg
     1741 tcgcttacgt ctactttgcg cgctaaaaga tttaatttcg ttcttcttga cgtcggttca
     1801 gccatcatcc tatcgtgtga tacaatcgca agatgaggcg gttacagttt atgctcgcca
     1861 ttggttagta ttgtcctgtc gttgtctctt ataacgggtg gcaggattgc cggccgtacg
     1921 ccgaggtgca cggtcgtcgc tggccggtgt ggaaaggcag cgtgcccgga ctggccgcag
     1981 accgagggcg aagcgatggt ccgctgggat aggctgatag cccaggcgcg gtcgttgcgg
     2041 agagcggaat caggacaacc tgcgagaact gcaagagggt ggttaccagg tgcatggcac
     2101 ggtcaggcgg tcgcgactta gcaacccctc ccagtgatta gtgccgacgc gataggggaa
     2161 atcgatgacc atcaactaca atgagccgat tacgtttgga tctgacggca acgccgtggg
     2221 tttgaattgc agcggcatcg atttttcgga agatggtgga cgctcctgga cgcgcgcgcc
     2281 g
//
LOCUS       DATAVD010001095         2329 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2526882, whole genome shotgun sequence.
ACCESSION   DATAVD010001095 DATAVD010000000
VERSION     DATAVD010001095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2329
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2526882"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..779)
                     /locus_tag="VHX39_20925"
     CDS             complement(<1..779)
                     /locus_tag="VHX39_20925"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX3993641.1"
                     /translation="MERTPQEIVQENRDYTMFSWSVQGTSNPICITRGQGVWFWDGDG
                     ERWIDFSSQLVNLNIGHQHPKVLEAIKKQVDELCFAGPSFATGPRGELGKKLAETTGL
                     AKSFFTLGGAEANENAMKIARLYTGRDKIITRYRSYHGATMGAMTASGDPRRWPAEPG
                     VPNIIRVFDPYCYRCPFGKTPDSCRRECVTHIEEVIQMEGPHTIAAILVEGITGSNGV
                     LVPPDDYYPKLRALCDKYGILLIDDEVMSGFGRTGRWLATQ"
     gene            complement(810..2057)
                     /locus_tag="VHX39_20930"
     CDS             complement(810..2057)
                     /locus_tag="VHX39_20930"
                     /inference="COORDINATES: protein motif:HMM:TIGR01879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent hydrolase"
                     /protein_id="HEX3993642.1"
                     /translation="MSLQPNRTVSELKELRELTSDANGAQRVAWTDTWLQARAWFESK
                     LAGLPVERHQDAAGNVWVTLRGESEKALLLGGHLDSVPNGGWLDGSLDELAGLEVLRR
                     FAEQYSGRPPVTIRLVDWADEEGARFGRSLLGSSAFAGTHSIEADRVRTDKDGIRMED
                     ALRRCGVEMDRFPEAASEAKDAAAYLELHIEQGPVLERMGLPLGVVLGTKGVERNAVT
                     FFGQEAHSGSTPMAVRKDALAAAAKLALEIRPIAAKHADAVCTIGSVKTFPGIVTAIV
                     GRCETTLDQRDLDTAVLSTMYREAREASERFAAEERCTVEWSRIWRIDPVPFDPELIE
                     FCAESIREVAGAVHRLPSGPLHDAAEVARAGIPVVMMFVQSLGGISHNKIEDTREEHI
                     ALSVSAMDRLAEKTVRWIQEHNR"
     gene            complement(2065..>2329)
                     /locus_tag="VHX39_20935"
     CDS             complement(2065..>2329)
                     /locus_tag="VHX39_20935"
                     /EC_number="3.5.2.2"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="catalyzes the hydrolytic cleavage of imides that
                     range from linear to heterocyclic and that include
                     hydantoins, dihydropyrimidines, and phthalimides; Derived
                     by automated computational analysis using gene prediction
                     method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="dihydropyrimidinase"
                     /protein_id="HEX3993643.1"
                     /translation="KLFGLFPRKGAVAVGADADLVIYDTGYRGVISAKTHHVNNDYSG
                     FEGFPIEGRPAVVTVRGAVQVRDGEFVGDPKRGEFLRREPIYV"
BASE COUNT          461 a          763 c          634 g          471 t
ORIGIN      
        1 tgctgggtgg cgagccagcg gccagtgcgg ccaaacccgc tcatcacctc gtcgtcgatc
       61 agcagtatgc cgtacttatc gcaaagcgcc cgcagcttcg ggtagtaatc gtcgggggga
      121 accaagacac cgtttgatcc cgtgatgccc tcgaccagta tggccgcaat ggtgtgcggg
      181 ccttccatct ggatcacttc ttcgatatgc gtgacgcatt cgcgacggca actgtcgggc
      241 gttttgccga acggacagcg ataacagtaa ggatcaaaaa cacgaattat gttgggcact
      301 cccggttcag ccggccagcg gcgcggatcg cccgaagccg tcatggcgcc catagtggcg
      361 ccgtgatagg accgatagcg cgtgatgatc ttgtcgcggc ccgtgtacag cctggcgatc
      421 ttcatggcat tttcgttcgc ttccgcgccg ccgagcgtaa aaaacgactt ggccaaaccg
      481 gttgtttccg ctagtttctt gcccagttcg ccgcgcgggc ccgtcgcaaa cgatgggccg
      541 gcaaagcaaa gttcgtcgac ctgcttttta atcgcctcca gaacctttgg atgctggtga
      601 ccgatattca aattgaccaa ctgcgaactg aaatcgatcc atcgctcccc atcgccatcc
      661 cagaaccaca cgccctggcc gcgcgtaatg cagatgggat tcgacgtgcc ttggaccgac
      721 caggagaaca ttgtatagtc ccggttttcc tgaacaattt cctgcggtgt gcgttccatt
      781 ctctccccct gggtggcgaa atacttccgt tatctattgt gctcctgaat ccagcgcact
      841 gtcttctccg ccaggcggtc catggccgaa acggaaagcg caatgtgctc ttccctggtg
      901 tcttcgatct tgttatgact gattccgccc agcgattgga cgaacatcat caccaccgga
      961 ataccggccc gagcgacttc ggccgcatcg tgcaaagggc ctgacggcaa gcggtgcacc
     1021 gcgcccgcca cctcccgaat gctttccgcg cagaattcga tcagttccgg atcgaagggc
     1081 accggatcga tgcgccagat gcgcgaccac tcgactgtgc agcgttcttc ggcggcaaac
     1141 cgttcgctcg cttcgcgagc ttcacgatac atcgtagaca gtaccgccgt atccaaatca
     1201 cgctgatcca acgtggtctc acatcgcccc acgatcgcgg taacgatccc cggaaacgtt
     1261 ttgacgcttc ctatagtgca gaccgcatcg gcatgcttcg cggcgatggg tcggatttcg
     1321 agagccaact tcgcggccgc cgccagagcg tctttgcgca ccgccatggg agtggatccg
     1381 gaatgcgctt cctggccgaa gaaagtaacc gcattgcgtt ccacaccctt cgtccctaac
     1441 accacaccga gcggcaggcc catgcgctcc agcacgggtc cctgctcgat atggagttcc
     1501 agataagccg ccgcatcctt cgcttccgac gcggcttcgg gaaagcggtc catttcgacg
     1561 ccgcaccgcc gcagcgcatc ctccatgcga atgccgtctt tatcggtgcg aacgcggtcg
     1621 gcctcgatgc tgtgggtacc cgcgaaggcc gaagaaccga gcaggctgcg gccgaaacgt
     1681 gcgccttctt cgtcggccca atcaaccagg cgaatggtga ccgggggacg gccgctatac
     1741 tgctcagcaa agcggcgcag cacttccagc ccggccagtt cgtctagcga gccatccagc
     1801 catccgccgt tgggcacgga atcgagatgc ccgccaagca acagcgcctt ctccgattcg
     1861 ccccgcagcg tcacccaaac attcccggcc gcatcttgat gacgctccac cggcaatccg
     1921 gccagcttcg attcaaacca cgcccgcgct tgcagccatg tgtccgtcca agccactcgc
     1981 tgcgcgccat tcgcgtcgga ggttagctcg cgcagttctt tcaactcaga tacggttcga
     2041 ttgggctgaa ggctcataac agggtcagac gtatatcggc tcgcgccgta gaaattctcc
     2101 gcgtttcgga tctccgacga attcgccatc gcgcacctgg accgcacccc gtaccgtgac
     2161 caccgcgggc cgtccctcaa tcgggaatcc ttcaaaacct gaatagtcgt tgtttacatg
     2221 gtgcgttttg gccgagatca cgccgcgata gccggtgtcg taaatgacca gatccgcatc
     2281 ggcgcctacg gcaacggcac ccttgcgcgg gaaaaggccg aacaacttg
//
LOCUS       DATAVD010001096         4702 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1780598, whole genome shotgun sequence.
ACCESSION   DATAVD010001096 DATAVD010000000
VERSION     DATAVD010001096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4702
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1780598"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..992
                     /locus_tag="VHX39_20940"
     CDS             <1..992
                     /locus_tag="VHX39_20940"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HEX3993644.1"
                     /translation="RDNLHIETNALASRLLFEGRQCAGIAFSQHGETKHIRVAKEVLL
                     CGGSINSPHLLQISGVGPAACLNAIGVPVVHDLPGVGANLQDHYVARVSHRVKGAISI
                     NKLARGLRLTREIARFFLEGRGALTFGVTTAQVLCRSSPEKASPDLQLLFTPASYDPT
                     KFGALEREDGMTVAVCPVRPDSRGTIMARSADPATAPIITPNYLSDPGDARVLATGMR
                     FTRQIFAAPAIAQHSVEETLPGPDARSDEELTDYARNFGNTIYHPVGTCRMGQGPSAV
                     VDERLRVYGIAGLRVIDASIMPTLTTGNTNAPTIMIGEKGASMIREDANLAVG"
     gene            complement(989..1468)
                     /locus_tag="VHX39_20945"
     CDS             complement(989..1468)
                     /locus_tag="VHX39_20945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEX3993645.1"
                     /translation="MSQPVIVHHDIVRPEWIDSNGHMNLAYYVVVFDLATDKLYATLG
                     VGDAYREATGNSCFTAETHTVYEREVHLGERLHVHTWLLGADSKRLHYFHELFHSDSG
                     DRSATQELMALHIDMRVRRVAPFPDLQREALQQAVANFAPVQPPKGIGRRISMPERS"
     gene            complement(1527..2330)
                     /locus_tag="VHX39_20950"
     CDS             complement(1527..2330)
                     /locus_tag="VHX39_20950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993646.1"
                     /translation="MSALPPYHVAAYNTAKSSENKIHDDATAKRFGFKGGLVGGVHVY
                     AYMSHLPVQRWGRAWLERGTGEARFGKPVYEGDIAEITAVDDATGMSLQVDSGGQLCA
                     TGHAGLPDINPDLPNLADFASVPARAQRVDADEQSLRIGDWLGMTPLTITQEYQTQDI
                     ADTRETDPLYLREGIVHSGTILRCCNWALSHNVILPAWMHMGSTVQNLGVARVGDTLG
                     VRARVTKNYEHKGHKWVEIDALVTANQATPIARVTHIAIYRPRQLAEAA"
     gene            complement(2386..3276)
                     /locus_tag="VHX39_20955"
     CDS             complement(2386..3276)
                     /locus_tag="VHX39_20955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993647.1"
                     /translation="MNDMVATPQFDRTVEDLGNIVELGHVNVTIPDQSLATAFYLMGL
                     GLTRDPYLMAGLENMWVNVGKGQFHMPTRGAQVVRGTTALVLPDLEALLKRLHYAKKF
                     LEGTQFSYREAGDVVETTCPWGNRIRVHAPDPARFGPMRVGMPYVEFDVPEGTNLAAI
                     ARFYKEILGGIAGVAQDERGQYAWASCSGECKVTYRHTKAELPEYDGHHIQITLADFS
                     GPHKKLLERGLIVEESDQHQYRFLDLVDVDTNKPLFRIEHETRSMRHPMFNRVYVNRN
                     PDMTNRNFIPGYEVGQFALN"
     gene            complement(3348..4691)
                     /locus_tag="VHX39_20960"
     CDS             complement(3348..4691)
                     /locus_tag="VHX39_20960"
                     /EC_number="2.7.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/ABC1/UbiB kinase family protein"
                     /protein_id="HEX3993648.1"
                     /translation="MSGSNFFGELRRMARTSGAVGGIAARVAGERMFGIRTDRAAHAE
                     DLRTILGGLKGPLMKVAQFLSTVPDALPMEYAEELAQLQANAPAMGWNFVRRRMASEL
                     GPEWRSRFEAFSQTASAAASLGQVHRATLPDGREVACKLQYPDMPSTVEADLRQLRLA
                     MAVYHRMDNAIQHEEIYKELTERLREELDYEREAAQMRLYALMLAEHPTVHVPTPIPG
                     FCTRRLLTMTWLDGRPLMQRLAEDPPQDERNRIAEALFRAWYVPFYRYGVIHGDPHMG
                     NYQVRPDGSVNLLDFGAIRVFDARFVRGVIDLYEAVRDNDDAKAHHAYETWGFTDLSN
                     EKMSVLNLWARFLYEPLTEDRVRRIQETDDPQFGRAVAEKVHAGLKRTGGVKPPREFV
                     MMDRSAIGLGGVFLRLRAELNWSRLFQGLIEDFDAAALADRQRAVLLEAGVPPAA"
BASE COUNT          989 a         1451 c         1324 g          938 t
ORIGIN      
        1 accgcgacaa tctgcacatc gaaaccaatg cacttgcttc caggctgctg tttgaagggc
       61 gccagtgtgc cggtattgcg ttctcgcagc atggggaaac gaaacacatt cgtgttgcaa
      121 aggaggtgct gctgtgcggc ggctcgatca actcgccaca tttgctgcaa atctccggcg
      181 tcggaccagc ggcgtgtctg aatgcgatcg gagtaccggt ggtgcatgac ctgccgggag
      241 tcggtgcaaa tttacaggac cattacgttg cccgcgtctc gcaccgtgtc aaaggtgcaa
      301 tttcgatcaa caaattggct cgtggcctgc ggctgacgag ggaaatcgca cgctttttcc
      361 tcgagggcag aggggcgctg accttcggcg tgacgacggc gcaggtgctc tgccgatcca
      421 gcccggaaaa agccagtccc gacctacagt tgttattcac gcccgcgagt tatgatccaa
      481 ccaaattcgg tgcgctggaa cgggaggatg gcatgactgt cgctgtctgc ccggttcgcc
      541 cggatagccg aggaacgatc atggcacgct ctgccgaccc ggcaacggcg ccgatcatca
      601 cgccaaacta cctgtctgac ccgggcgatg cccgcgtcct ggccaccggc atgcgcttta
      661 cccgccaaat cttcgcagcc cccgccattg cccaacacag cgtcgaagaa acgcttcccg
      721 gacccgacgc tcgcagcgac gaagagctaa ccgactacgc acgcaacttt ggcaacacga
      781 tctatcatcc ggttggcacc tgccgcatgg gccagggacc ctctgcggtc gttgacgaac
      841 ggttgcgtgt ctacggcatc gctggcctgc gcgtgatcga cgcatccatc atgccgactc
      901 tgaccactgg taacaccaac gcaccgacca tcatgattgg agaaaagggt gcttcgatga
      961 ttcgcgaaga tgcgaacctg gccgtcggct aagaccgttc cggcatcgaa atacgtcgac
     1021 cgattccctt tggcggctga acgggcgcaa agttggcaac tgcctgctgc agggcctcac
     1081 gttgcaggtc cggaaacggc gccacccggc gcacccgcat atcgatatgc agtgccatca
     1141 gttcctgcgt cgcggagcga tcgccgctat cggaatgaaa cagctcgtgg aaatagtgca
     1201 atcgcttgga gtctgcgccc agaagccacg tatgaacgtg caaacgttcc cccaggtgca
     1261 cttcgcgttc gtataccgtg tgagtttcgg cggtaaaaca tgaattaccc gtcgcctccc
     1321 ggtaagcatc gccaacgccc aatgttgcgt agagcttgtc agtggcgaga tcgaaaacga
     1381 cgacgtagta agcgagattc atgtgaccgt tggagtcgat ccactccgga cggacgatgt
     1441 cgtgatgcac gatgacgggc tggctcatgg tgcatcgcac aatgttgcgg ccgcgacttt
     1501 cggtcaagtc ggcgcaagaa ccccggtcag gcagcctctg ccaactgccg cggccgatag
     1561 atcgcgatat gcgtcacacg ggcaatcggt gtcgcctggt tggcggtcac cagggcgtcg
     1621 atctcgaccc acttatgacc tttgtgttca tagtttttcg tgacgcgggc gcgaacgccc
     1681 aatgtatcgc cgacccgggc aacacccagg ttctggacag tgctgcccat gtgcatccac
     1741 gccggcagaa ttacgttgtg cgacaatgcc caattacagc agcgcagaat tgtccccgaa
     1801 tggacgatgc cttcgcgcaa atacagcgga tccgtctccc gcgtatctgc gatgtcctga
     1861 gtttgatatt cttgtgtgat tgtcagcgga gtcatcccca gccaatcacc gatcctcagt
     1921 gactgttcgt ccgcatcgac acgttgtgca cgggccggaa cggatgcgaa atccgcaagg
     1981 ttcggtaaat cggggttgat gtcgggcagt ccggcatggc cggtcgcaca gagctggccg
     2041 ccactatcga cctgcaacga catccctgtc gcatcgtcca ccgccgtgat ctctgcgatg
     2101 tcaccctcgt atacaggctt gccgaaccgg gcttccccgg ttccacgctc aagccaggcg
     2161 cggccccacc gttgcacggg cagatgggac atgtatgcgt agacatggac gccgcccacc
     2221 aacccgccct taaagccaaa gcgttttgct gtcgcatcgt cgtggatctt attttcggat
     2281 gatttcgcgg tgttataggc ggcgacgtgg tacggcggca gtgctgacat ggaaacaacc
     2341 tccggccatc cgcaacacgc ggatggccaa cacgcaaatg tcggactaat ttaaggcgaa
     2401 ctgaccaact tcataaccag gaatgaaatt gcggttggtc atatcggggt tgcggttcac
     2461 atacacgcga ttgaacatcg gatgccgcat actacgggtt tcgtgctcga tccggaacaa
     2521 cggcttattc gtgtcaacgt caacgagatc gaggaaacgg tattgatgtt ggtcgctttc
     2581 ttctacgatc aacccacgct cgagcaattt cttatgcggt cccgagaaat cagccagcgt
     2641 gatctggatg tgatgaccgt catattcggg cagctcagcc ttggtatgac gatacgtcac
     2701 cttgcattca ccggagcatg aagcccacgc atattgtccc cgctcatcct gggcgacacc
     2761 ggcgataccc ccaaggattt ccttgtagaa ccgagcaatt gccgccagat tggttccctc
     2821 cggaacatcg aactcaacat agggcatgcc aacgcgcatc gggccaaacc gcgccggatc
     2881 gggtgcatgg acgcggatac gattgcccca cggacacgtt gtctcaacga catcgccggc
     2941 ttcgcgatag ctgaattgtg tgccttccag gaacttcttc gcgtagtgca aacgcttcaa
     3001 cagggcttcg agatccggca gcaccaaagc ggtcgttcca cgcacgacct gcgcgccgcg
     3061 ggtcggcata tggaactggc cttttccgac gttgacccac atgttttcca gaccggccat
     3121 gaggtaggga tcgcgcgtga ggcccaggcc catcaggtaa aacgcggtcg ccagcgactg
     3181 gtctggaatg gtcacgttta cgtggccaag ctccacgatg ttgcccaggt cctcaaccgt
     3241 ccggtcaaat tgcggcgtcg ccaccatgtc gttcatctct tgggtccttt tgtccagatt
     3301 tcctggcggt gcgccagaat aaccccgaat cgatactggg tccatcgtca ggccgcaggt
     3361 gggacgccag cctccaacag cacagcccgt tgccggtcgg ccagcgccgc cgcatcgaag
     3421 tcctcgatca gaccctgaaa cagccggctc cagttcaact cggcgcggag ccggaggaac
     3481 actccaccca atccgatggc agatcgatcc atcatgacga attcacgcgg cggtttcacc
     3541 ccgcccgttc gtttcagccc agcatggacc ttctcggcga cggcgcggcc aaattgcggg
     3601 tcatcggttt cctggatgcg gcgaacccgg tcttccgtca gcggttcgta taagaagcgg
     3661 gcccaaaggt tcaacacact catcttctcg ttcgacaaat cggtaaagcc ccaggtctca
     3721 taggcatgat gggccttcgc atcgtcgttg tcccgcaccg cctcgtacag gtcgataaca
     3781 ccacgcacaa agcgtgcatc gaacacacga atcgcgccga aatccagcag attcacagag
     3841 ccgtccggtc gtacttggta attgcccatg tgagggtcgc cgtgaatgac cccatatcgg
     3901 taaaacggca cgtaccaggc acggaacaga gcttccgcaa tccggttccg ctcatcctga
     3961 ggcgggtcct cggccagacg ctgcataagc ggacgaccgt ccagccaggt cattgtcaac
     4021 aagcgccgcg tgcaaaaccc gggaattggc gtcggcacgt gcacggtcgg atgttccgcc
     4081 agcatcagcg cataaagtcg catttgcgcc gcctcgcgtt catagtcgag ttcctcgcgg
     4141 aggcgttcag tcaactcttt gtagatctcc tcgtgttgga tcgcattgtc cattcggtga
     4201 tacacggcca ttgccaggcg caactgacgg aggtcggcct caacggtgct cggcatgtcc
     4261 ggatattgta gcttgcatgc gacttcacga ccgtcaggca aggttgcgcg atggacctga
     4321 ccgagcgacg cagcagcgga cgcagtctgg gaaaacgcct cgaagcggga acgccactcc
     4381 ggaccgagtt cactcgccat gcggcggcgc acgaagttcc agcccatggc cggtgcattt
     4441 gcctgaagtt gggccagttc ctcggcatat tccatcggca gcgcatcggg cacggtcgac
     4501 agaaactgcg caaccttcat aagcggcccc ttcaggccac caagaatggt ccgtagatcc
     4561 tcagcatgag ccgcacgatc ggtgcgaatg ccgaacatgc gctccccggc cacgcgcgcg
     4621 gcgattccgc caacggcacc cgaggtgcgc gccatgcggc gaagttcacc gaagaaatta
     4681 ctgccggaca ttgttactca aa
//
LOCUS       DATAVD010001097         1990 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1223888, whole genome shotgun sequence.
ACCESSION   DATAVD010001097 DATAVD010000000
VERSION     DATAVD010001097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1990
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1223888"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1686
                     /locus_tag="VHX39_20965"
     CDS             <1..1686
                     /locus_tag="VHX39_20965"
                     /EC_number="4.2.1.82"
                     /inference="COORDINATES: protein motif:HMM:TIGR03432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjhG/YagF family D-xylonate dehydratase"
                     /protein_id="HEX3993649.1"
                     /translation="VEAAAKEFKALGGVPFAGYCTDPCDGRTQGTTGMFDSLPYRNDA
                     ATVLRRLIRSLPTRRGVMGVATCDKGLPAMTMALAGSPDLPSILVPGGVTLMPENGED
                     AGRVQSMGARFAHHTMTLEQAAEMGCRACASPGGGCQFLGTAATSQVVAEALGMTLPH
                     AALAPSGQPIWLDMARRSARALVGMANRRLHGRDILTPSSIRNAMAVHAAFGGSTNLI
                     LHLTAFAHAAGLRRPTSRDWVEMSRAVPRLVDALPNGPRNHPTVQVFLAGGVPEVMLH
                     LRRMDLLDTSVLTVTGESLNKSLDWWEASERRARLRQLLRDRDGINPDDVIADPESAK
                     QRGFSATVCFPHGNIAPEGSVIKATAIDPAMVGEDGVFRQTGPARTFLTETSAIEAIK
                     NDTVRAGDILVLMCRGPLGAGMEETYQLTSALKHLEFGKHIVLITDARFSGVSTGGCI
                     GHVSPEALAGGPIGKIEDGDLIEVIVDRRRLEGSINLVGVQGRPFSADEGTRVLAERK
                     PRADLGHDPALPDDTRLWAVLQDISGGSWGGSVYDVDAILRVIEAGKRVLAQT"
     gene            complement(1687..>1990)
                     /locus_tag="VHX39_20970"
     CDS             complement(1687..>1990)
                     /locus_tag="VHX39_20970"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3993650.1"
                     /translation="GRSAYSSSKTALLGLTRALALELAAEGITVNGISPGPFATEMNL
                     PVMNNPEANAQFLANLPIGRWGKVEEIGGLACFLCSDAAAFITGTDILIDGGWTAR"
BASE COUNT          372 a          568 c          661 g          389 t
ORIGIN      
        1 gtggaggcgg cggcaaagga gttcaaggct ctcggcggag tgccgtttgc cggatactgc
       61 accgacccgt gcgacgggcg cacgcaaggc accacgggca tgtttgacag cctgccctat
      121 cggaatgatg cagcaacggt attgcggcgg ctgatccgct cgctgcccac ccggcgcggc
      181 gtgatgggcg tggccacttg tgacaaaggg ctgcccgcga tgaccatggc gcttgctggg
      241 agtcctgacc tgcccagcat cctggttccg ggcggagtca cgttgatgcc cgagaacggc
      301 gaagatgccg gccgcgttca atcgatggga gcgcgatttg cacaccacac gatgacgttg
      361 gaacaggcgg cggagatggg ttgccgcgcc tgcgcatcgc ccggcggcgg ctgccaattt
      421 ctgggaacgg cggctacttc gcaagtagtg gcggaggcac tgggaatgac gctgccgcac
      481 gctgctctgg caccttccgg ccagccaatc tggctcgata tggcgcggcg ttcggctcgg
      541 gcacttgtgg ggatggcgaa ccggcggctg catgggcggg acatcctcac gcccagcagc
      601 attcgcaacg cgatggctgt ccatgcagcc ttcggcggat cgacaaatct gattcttcac
      661 ctgaccgctt tcgcgcatgc ggcagggctt cgacgtccga catctcgtga ttgggtggag
      721 atgagccgcg ctgttccgcg cttagttgat gccttgccaa acgggccgcg aaatcaccca
      781 accgtacagg tctttttggc aggtggagtt cccgaggtca tgctacatct gcggcggatg
      841 gacctgctcg ataccagtgt cctgaccgtt acgggagaat cgctcaacaa gtcgctcgat
      901 tggtgggaag cctcggaacg tcgtgcgcgt ttacggcagc ttctgcgcga tcgcgatggc
      961 ataaatccgg atgacgtaat cgccgatccc gaaagcgcca agcagcgcgg cttttccgct
     1021 accgtgtgtt ttccccatgg caacatcgct cccgaaggat cggtaatcaa ggcgactgcg
     1081 atcgatccgg cgatggtcgg agaggatggc gtctttcggc aaaccggtcc ggctcgaacg
     1141 ttcctgacgg agaccagtgc catcgaggcg attaagaacg atacggtgcg ggcgggcgat
     1201 attttggtcc tgatgtgccg cggtcccttg ggcgcgggca tggaggagac gtatcaactg
     1261 acatcggcgc tgaagcatct ggaattcggg aaacacattg tgctgatcac ggatgcacgt
     1321 ttcagcggtg tatcaacggg tggctgcatt ggccacgttt caccggaagc cctggccggc
     1381 ggtccgattg gcaagatcga ggatggcgat ttgatcgaag tgattgtcga tcgaagacgc
     1441 ctggaaggtt ctatcaacct ggttggcgtt caaggcaggc cgttcagcgc ggacgagggt
     1501 acgcgcgtgc tcgccgagcg aaagccgcgc gcggatttgg ggcacgaccc ggctctcccc
     1561 gacgacacgc ggctttgggc ggtactgcag gatattagcg gtggaagttg gggaggcagc
     1621 gtctatgacg tcgatgcgat tctgcgcgtg atcgaggccg gcaagcgcgt tctggcccag
     1681 acgtaatcag cgggccgtcc agccgccgtc gatcagaata tcggttcccg tgatgaaggc
     1741 tgcggcgtcc gaacagagaa aacaagccaa gccgccgatc tcctccacct tgccccatct
     1801 gccaatgggg aggttggcta gaaactgcgc attcgcttcc gggttgttca ttacgggtaa
     1861 attcatttca gtggcaaacg ggccagggct gatgccattc acggtgatgc cttccgccgc
     1921 caattccaat gccagtgcgc gggtcaggcc tagcagagcg gtcttgctcg acgaatacgc
     1981 ggagcggccg
//
LOCUS       DATAVD010001098         2961 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1407537, whole genome shotgun sequence.
ACCESSION   DATAVD010001098 DATAVD010000000
VERSION     DATAVD010001098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2961
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1407537"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..690)
                     /locus_tag="VHX39_20975"
     CDS             complement(<1..690)
                     /locus_tag="VHX39_20975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase"
                     /protein_id="HEX3993651.1"
                     /translation="MTATIFVPGDAAARAVGAEAVARALTVAIASGGHDARIVRTGSR
                     GLFWLEPMIEVATPTGRIAYGPVTESDISGLLAAGLLTGGAHPKRLGLPGEIPFLAQQ
                     TRLTFARCGVIDPLSLEDYRAHGGLAGLERARAIGPAATIETVLKSGLRGRGGAGFPA
                     GIKWKTTADAAGDRKFIVCNADEGDSGTYADRMLMEGDPFCLIEGMAIAGFAVGASKG
                     YVYTRSEYPHAI"
     gene            complement(687..1151)
                     /locus_tag="VHX39_20980"
     CDS             complement(687..1151)
                     /locus_tag="VHX39_20980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HEX3993652.1"
                     /translation="MPSNGPWELAQASRIIGNFAGLPGAALPILHALKDAFGHVPPEA
                     VPMIATALNITRAEMHGIVSFYHDFRTTPTGRRVLHLCRAEACQAMGGAALARGLLDR
                     LGIDWGGTTANGDLTVEPVFCLGLCACAPAALLDGEPLGRLDPAALDAVCAS"
     gene            complement(1273..2166)
                     /locus_tag="VHX39_20985"
     CDS             complement(1273..2166)
                     /locus_tag="VHX39_20985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3993653.1"
                     /translation="MINKLEFFIALAHERHFGHAAEVCGVTQPTLSAAIKQLEESFGV
                     LLVNRGSRFVGLTKEGERVLEWARRIVADTRAMRDEIRGLNEGLTGHLRIAAVPTALA
                     MVPRFTTPYREHHPGVRFTVLSCNSTEILALLEDLEIDAGLTYLDNEPLGRVRAFPLY
                     RERYRLLTSPGSPLSDREHVTWAEVARLPLCLLTPDMQNRRILNRLLSGSGAMPMPTM
                     ESNSMIALFAHVRTGKWASVMPRILAETLGLADLLRSIPIVEPDATHTIGLVVPNRDP
                     MAPLCAALVREADRLVADLMD"
     gene            complement(2353..>2961)
                     /locus_tag="VHX39_20990"
     CDS             complement(2353..>2961)
                     /locus_tag="VHX39_20990"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3993654.1"
                     /translation="RTADMAGGVPMMMHITDSPIPLPDLIEHMKPGDIVTHCYHGRAH
                     GIMGQEKQFLLKEVVEAQRAGIIFDCAHGRNHFSFRMIEKALDQGFLPDTISTDLTVT
                     SATRGPVWDLPTTMTKLLHFGMPLDEIVRRSTAAPAKIMGYAGTVGTLKPGANADVSV
                     FELRDGNFELTDSDRETVVAKRRLLAQLTVKDGRVWYERPAE"
BASE COUNT          553 a          980 c          917 g          511 t
ORIGIN      
        1 gatggcgtgc ggatattccg agcgcgtgta gacgtagcct ttgctggcgc cgaccgcgaa
       61 accggcgatc gccatgccct caatcagaca gaacgggtcg ccttccatca gcatgcggtc
      121 agcgtaggtg ccggagtcgc cctcgtcggc gttgcagacg atgaacttgc gatcgccggc
      181 ggcatcggcg gtggtcttcc acttgatccc ggctgggaac ccagcaccgc cacggccgcg
      241 caggccggat ttcagcaccg tctcgatggt cgccgccgga ccgatcgctc gcgcgcgctc
      301 caggccggcg aggccgccat gtgcccggta atcctccagc gacaggggat cgatcacgcc
      361 acagcgcgcg aacgtcaggc gggtctgttg cgccaggaac ggtatttccc caggcagacc
      421 caaacgcttt gggtgggctc cgccggtcaa caggccggcg gcgagcaggc ctgaaatgtc
      481 ggattcggtg accgggccgt aggcgatgcg gccggtgggc gtcgccacct caatcattgg
      541 ttccagccag aacaggccgc gcgatcccgt gcgcacgatg cgggcgtcat ggccgccgga
      601 cgcgatcgcg acggtcagtg cccgcgccac cgcttcggca cccacggctc gcgcggcggc
      661 atcgccgggg acgaatatcg tagcggtcat gaggcgcaga ccgcgtccag ggcggcaggg
      721 tccagccggc cgagcggctc cccatcgagc agtgcggccg gcgcacaggc gcacaaaccc
      781 aaacaaaaca ccggctcgac cgtcaggtcg ccattcgcgg tggtcccgcc ccaatcgatc
      841 cccaaccggt cgagcaaccc gcgcgccagc gccgcacccc ccatcgcctg gcaagcttcg
      901 gcacggcaca gatgcaacac ccgccgtccg gtcggtgtgg tccggaaatc atgatagaag
      961 gaaacgatgc catgcatctc cgcgcgcgtg atattgagcg cagtcgcgat catcggcacc
     1021 gcctcgggcg gcacgtgccc gaaggcgtct ttgagggcgt gcagaatagg cagggccgcc
     1081 cctggcaggc cggcaaaatt cccgatgatc ctggatgcct gggcaagctc ccacggcccg
     1141 ttcgatggca ctgcttttgg cttcccgatg tttggtcaat taccatcggc atgcgagacg
     1201 caggaatcaa cggggtcgat cccatggatc gatagaaatg ttctatcgag gcgctgcgcg
     1261 atcccgcttg ggtcagtcca tcagatccgc caccagccgg tcggcttcac gcaccaatgc
     1321 tgcacaaagc ggcgccatgg gatcacggtt tggcacgacc aggccaatcg tatgtgtggc
     1381 gtccggctcg acgatgggga tgctgcgcag cagatcagcg aggcccagcg tttccgccaa
     1441 tatccgtggc atcacgctgg cccatttgcc ggtccgaaca tgggcgaaca gcgcgatcat
     1501 cgagttcgat tccatcgtcg gcatcggcat tgccccagat cccgacaaca gccggttgag
     1561 gattcgacga ttttgcatgt ccggggtcag caggcacaac ggcagccgcg cgacctcggc
     1621 ccaggtaaca tgttcgcggt cggacagggg actgccaggc gaggtcaaca ggcggtagcg
     1681 ctcgcggtaa agcgggaacg ctcgcactcg gccgaggggc tcgttgtcga gataggtgag
     1741 gccggcatcg atctcgagat cctccagcag ggcaagtatt tcggttgaat tgcacgacag
     1801 cacggtgaag cgaaccccgg gatgatgctc ccgatacggc gtggtgaacc tgggcaccat
     1861 tgccagagcg gtcggcacgg cggcgatgcg cagatggccg gtcaggcctt cgttcaagcc
     1921 gcggatttca tcgcgcattg cccgtgtgtc ggcgacgatg cgacgtgccc attccagcac
     1981 ccgctcgccc tccttggtca ggccgacaaa gcgtgaaccg cgattaacca gcaggacgcc
     2041 gaaactctcc tcgagttgct tgatggcggc agacagggtt ggctgcgtca cgccgcatac
     2101 ctcggccgcg tggccaaaat gccgctcatg cgcgagcgcg atgaagaact ccagcttatt
     2161 gatcaccgtg gatcgctcca gcgtgatgag acgcgtccgt cgaaatagcg gaaaaagccg
     2221 tggccgcgtc ccccgatctt ttgtgcggtc atgcaatgta acatgcacgc ggttccacgc
     2281 atgctacggc gcactgccgg gaacaatgct ttggcgatcc gtcaaagccc ccggcagcgg
     2341 caaaccatcg cgttactctg ccggccgttc ataccacacc cgcccgtcct tcaccgtcag
     2401 ctgagccagc agccggcgct tcgcaacgac cgtttcgcgg tcgctatcgg tcagctcgaa
     2461 attgccgtcg cgtagttcga acaccgaaac atcggcattg gcgccgggct tcagtgtgcc
     2521 gaccgtgccc gcataaccca tgatctttgc cggagcagcc gtcgaccgcc gcacgatctc
     2581 atccaacggc atcccgaaat gcaacaattt cgtcatggtt gtgggcaggt cccagaccgg
     2641 tccgcgcgtt gcactcgtca ccgtcagatc ggtggatatc gtgtccggca gaaatccctg
     2701 gtcgagcgcc ttctcgatca tgcggaagct gaaatggttc cgcccatgcg cgcaatcgaa
     2761 aatgatcccg gcccgctgcg cctcgaccac ttccttcaac aggaactgct tttcctgccc
     2821 catgatccca tgcgcccgcc catggtagca gtgcgtaacg atatcgcccg gcttcatatg
     2881 ctcgatcagg tcgggcagcg ggatcggcga gtcggtgata tgcatcatca tcggcacgcc
     2941 gcccgccatg tccgccgtcc g
//
LOCUS       DATAVD010001099         1537 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_853926, whole genome shotgun sequence.
ACCESSION   DATAVD010001099 DATAVD010000000
VERSION     DATAVD010001099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_853926"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1441
                     /locus_tag="VHX39_20995"
     CDS             <1..1441
                     /locus_tag="VHX39_20995"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3993655.1"
                     /translation="DKRVNWMFQTEPDPGANNRPIYWPRGKVLGGSSSINGMVYIRGQ
                     HEDFDHWRQLGNPGWSAADVLPYFKRSERNTRGQDDWHGSDGQLSVSDASYSHPICDA
                     FVDAAVELGFPRNADFNGESQEGVGYQQTTTRNGKRCSTAVGYLHPAMKRPNLRVITR
                     ALTERVIFDGKRAVGVAFRENGVPKTVRARREVILSGGAIGSPHVLLMSGVGPAAHLA
                     EKGVEIVHDLPGVGQCLQDHYSAAVKLRCREKITFNDVMMNPLKQLAVGVRYLMFRDG
                     PLTMAAGPCALFARTRPELATPDVKLSISPFSSDNPAAGLHKFSGFTVIVYQLRPDSR
                     GEIRLKSLDAAASPSIMPRYLSDPNDQRTVVDGLKLIRRLLSTRHFERFTESEFRPGP
                     DVQTDAELLNYARQFGGTVYHPTSTCRMGNDPMAVVDPELRVHGIEGLRVVDASIMPT
                     VASGNTNAPTIMIAEKAVDLVRGRMAMAA"
BASE COUNT          290 a          444 c          506 g          297 t
ORIGIN      
        1 cgacaagcga gtgaactgga tgttccagac cgagccggat cccggcgcca acaatcgccc
       61 gatctactgg ccgcgcggca aggtactggg tggctccagc tcgatcaatg gcatggtcta
      121 catccgcggt cagcacgagg acttcgacca ctggcggcaa ctgggcaatc ccggctggtc
      181 cgccgcggac gtgttgccgt atttcaaacg ctccgagcgg aatacgcgcg ggcaggacga
      241 ctggcacggc agcgacggac agttgtcggt atcggatgcc agctacagcc atccgatttg
      301 cgatgccttc gtcgatgccg cagtggaact tggttttccg cgcaacgccg atttcaatgg
      361 cgagagtcag gaaggcgtcg gctatcagca aaccacgaca cgcaacggca agcgttgttc
      421 gactgccgtt ggctatctgc atccggcgat gaaacggccc aatctgcgag tgatcacgcg
      481 tgccttgacc gaacgcgtga tattcgacgg taagcgcgcg gtgggagttg cgttccgcga
      541 aaatggcgtt ccgaaaacgg tgcgcgcccg ccgcgaggtc attttgagcg ggggcgcgat
      601 tggatcgccg cacgtgttgc tgatgtccgg tgtcgggccg gcggcccatc tcgctgaaaa
      661 aggcgtagag atcgtgcacg atctgcccgg tgtcgggcag tgtctgcagg atcattattc
      721 ggcggcggtg aaactgcggt gccgcgaaaa aatcaccttc aacgacgtga tgatgaatcc
      781 gttgaagcaa ctcgcggtcg gcgtgcgtta tctgatgttc cgcgatggtc cgctgaccat
      841 ggccgcaggt ccctgcgcgt tgttcgcgcg gacccggccg gagctggcga cgccggacgt
      901 gaaactgtcc atctcaccgt tcagttcgga caatcctgcg gcggggttgc acaaattttc
      961 cggcttcacg gtgatcgtct atcagctgcg gccggacagc cggggggaaa tccggttgaa
     1021 gtcgctcgat gcggcggcgt cgccgtcgat catgccgcgc tacttgtccg atccgaacga
     1081 tcaacggact gtggtggacg gcttgaaact gatccggcgg ctgctgtcga caaggcattt
     1141 cgaacgtttc accgagtcgg agttccggcc aggtccggat gtacagaccg atgccgaact
     1201 gctgaattat gcacggcagt ttggcggcac ggtgtatcat cccaccagca cctgccggat
     1261 gggcaacgat ccgatggctg tcgtcgatcc ggaattgcgg gtgcatggca tcgaggggct
     1321 gcgagtggtc gacgcctcga tcatgccgac cgtggcatcc ggcaacacca acgcgccaac
     1381 catcatgatc gccgaaaagg ccgtcgatct ggtgcgtggc cgtatggcga tggcggcgta
     1441 acgacatggc tcaggacatc gcggaagcgg attttgtcat tgtcggcgcc ggctcggccg
     1501 gctgcgtaat ggcggcacgg ctgtcggaag atccggc
//
LOCUS       DATAVD010001100         2059 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1407874, whole genome shotgun sequence.
ACCESSION   DATAVD010001100 DATAVD010000000
VERSION     DATAVD010001100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1407874"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..881
                     /locus_tag="VHX39_21000"
     CDS             <1..881
                     /locus_tag="VHX39_21000"
                     /inference="COORDINATES: protein motif:HMM:NF021445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphatidylglycerol lysyltransferase
                     domain-containing protein"
                     /protein_id="HEX3993656.1"
                     /translation="QYIPSLIGAGLVVMALALSHRVNLAWGLTILLLLVGAGFATTQD
                     NQIWLAGVLALSAVMLMPFRSYFYRRASLLSGPFDAPTTVSLIVLVICVLALALARHQ
                     TFLLSNNAWWAVVISREIPNSVRFAVALAVLLGSVAVWLLVRPGRVHALPWDASAARR
                     LFLMGAIPPPYADGMITGETDRAGLPFRRIGRVLLGLGDPAGAEGDKISAVWRLRDLA
                     RQEGLDPAFWRVGPDLLKVYADLGLTPLPLGTDGQIVQADETEDPQRRYLVCVAERDL
                     TALMPMLPELAGAPAE"
     gene            964..1800
                     /locus_tag="VHX39_21005"
     CDS             964..1800
                     /locus_tag="VHX39_21005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993657.1"
                     /translation="MNASCQPLPRSVAEEMLQVVARALCDRAGDSPAQRTGRTRQMVL
                     STLGMAPRDGLEMMLATLVFGHFQVILDAMADVFRGQTDALKAKTRAAIVPLGRAMLE
                     MIRELREVQQRPAALSPEDVQSDAAGAEQSQQPEAQSPQVVEVPEPDPLALTEEELAA
                     LSDPRLGLPDEVIAWVAGTGPAVNKVVSMEPAVTGPGETQLAASPGDRSAGARIPFDV
                     LATAGASSLGSVGVVLPVWQDPSKSLEERAASYRETVAAIYETLAEAQGEIAKAKVAS
                     AD"
BASE COUNT          347 a          598 c          725 g          389 t
ORIGIN      
        1 gccaatatat cccgtcgctg atcggtgccg ggttggtcgt catggcactg gcgctgtcgc
       61 accgggtcaa tctcgcatgg ggactgacga tcctgctgct gcttgtcggg gcggggttcg
      121 ccacgacgca ggacaaccag atctggctgg ccggcgtgct ggctctcagt gccgtgatgt
      181 tgatgccgtt tcgctcatat ttctatcgcc gcgcttcctt gctcagcggt ccgttcgacg
      241 caccgaccac ggtttccctg atcgttctgg tgatctgcgt gttggcactg gcgctggccc
      301 gccaccagac attcttgttg agcaacaacg cctggtgggc cgtggtgata tcgcgggaaa
      361 tccccaattc ggtgcgattt gcagtggcgc tcgcggtgtt gttgggctcg gtggcagtct
      421 ggctgctggt gcggccggga cgggtgcacg cgttaccctg ggacgcatcg gccgcgaggc
      481 ggttgttcct gatgggcgcc atcccgccgc cttatgccga cggcatgatc accggtgaga
      541 ccgaccgcgc cggcctccca ttccgccgca tcggccgcgt ccttctcgga ctgggcgatc
      601 cggccggcgc agagggcgac aagatctccg ccgtatggcg cctgcgcgat ctcgcccgcc
      661 aggaggggct ggacccggcg ttctggcggg tcggaccgga cttgttgaag gtctacgccg
      721 atctgggact gacgccgttg ccgttgggca ccgatggcca gatcgtgcag gccgacgaga
      781 cagaggaccc gcagcgccgc tacctcgtgt gcgtggcgga gcgggatctg acggcgttga
      841 tgccgatgct gcctgaactg gcgggcgcgc cggcggagta ggcgagcctc cggttttcca
      901 gttgacgcga tttagccgca gtgaaaaaaa gcctatgata aaggactgca taggcgaagt
      961 atcatgaacg catcctgcca gccgctgccc agatccgtcg ccgaggaaat gctgcaggtt
     1021 gtcgcccgcg cgctgtgcga tcgggccggc gacagtcccg cgcaacgaac cggccgaacc
     1081 cgccagatgg tgctctcaac tctggggatg gcgccgcggg atgggctgga aatgatgctc
     1141 gccactctgg tgtttgggca tttccaggtg atcctggacg ccatggccga tgtgttccgc
     1201 ggccagacgg atgcgttgaa ggcgaagacc agagccgcga tcgtgccgct ggggcgggcg
     1261 atgctggaga tgatcaggga gttgcgtgag gtgcagcaac gaccggcggc cctgtcgcca
     1321 gaagatgtgc agagcgatgc cgcaggtgcg gaacaatcgc aacaacctga ggcccagtcg
     1381 ccgcaggtgg tcgaggtgcc ggagccggat ccgctcgcgc ttactgagga agaactcgcc
     1441 gcgttgagcg atcctcggct ggggttgccg gacgaggtga ttgcgtgggt cgcggggacg
     1501 ggaccggcag tgaacaaggt tgtgtcgatg gagccggcgg ttacagggcc aggtgagaca
     1561 cagttagcgg ccagcccagg tgatcggagt gcgggggcca ggataccgtt cgatgttttg
     1621 gcgaccgccg gagcatcgtc gctcggaagc gtcggcgttg tcctaccggt gtggcaggac
     1681 ccaagcaaat cgctggaaga gcgtgccgca tcgtaccgcg aaacggttgc agcgatttac
     1741 gaaaccctgg cggaagcgca aggcgagatt gcaaaggcga aggttgcgag cgcggattga
     1801 ctgctcggtg acgctggtgc ggtgaggctg cctggcgttg tccaatccat tgcgcacgta
     1861 gcgttgcttt agccgcgggt ggcgcagggc catgagttcc gcccggatat ggctcgccac
     1921 ctggagcatg ctcaggctaa ctaaaaatca ttcgcgcggt ctggtgtccc gtgagaattc
     1981 ccacgacatc gtgcgcgatc agcaaagctg aaccacagag ccgcagagag tacggcgttc
     2041 ttgccggaaa tcctccgtg
//
LOCUS       DATAVD010001101         3334 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3082862, whole genome shotgun sequence.
ACCESSION   DATAVD010001101 DATAVD010000000
VERSION     DATAVD010001101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3334
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3082862"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            128..2086
                     /gene="mutL"
                     /locus_tag="VHX39_21010"
     CDS             128..2086
                     /gene="mutL"
                     /locus_tag="VHX39_21010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEX3993658.1"
                     /translation="MPETTVNRIAAGEVIERPAAAVKELVENALDAGARRISIALVGG
                     GIDRIEVTDDGSGMTAEELGLCVLRHATSKLNDDTLIRIDTLGFRGEALPSIGAAARL
                     EVTSRPRGSEGGHANAITVEGGVVGQVVPAAGAPGTRIVVRDLFFATPARRKFLKHPR
                     TEAEHAEAVVRRLAMAAPDTAFRLENEGRVIFDLPAQERAPRVAALLGTEAAASMLPV
                     REVRAVARGGPARQGQPASEGQVAGQDDSRGEMVLSGYLCAPTISRMTAAAQGLVVNG
                     RPVADPVLKTAVRVAYRDVIAHGRHPVVALWLDLPPEELDVNVHPAKTELRFRDPAAV
                     RSLVIGALSRVLAGAAGTDMPGPGLMQHRPALNLAWSRPPARGGIRALPLPGFPREAA
                     PPPPGMSETVLTPAYGPNASWHTSPGTPGDTGFPGSSGSDAGSPSGALDFVAPPVART
                     VQVPGSAQDYPLGAAVAQVLDTYIIAVAADGTLILVDQHAAHERLTHEAIRTRMLDGG
                     ASGQPLLLPAVVDLPEADASRLLARAIDLAQLGLEIESFGPGAVLVRALPVALGAPEP
                     APLIRDIADELAELDETMALSARLDAVIARMACHGSIRAGRRLGQAEMDALLRQMEAT
                     PRAATCSHGRPTFLRLSKAEIETLFGRR"
     gene            2215..2433
                     /gene="infA"
                     /locus_tag="VHX39_21015"
     CDS             2215..2433
                     /gene="infA"
                     /locus_tag="VHX39_21015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002517801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEX3993659.1"
                     /translation="MSKEDMIEFSGTVMELLPNAMFRVKLDNEHSILAHTSGKMRKNR
                     IRVLAGDRVNVEMTPYDLSKGRITFRFK"
     gene            2500..3060
                     /locus_tag="VHX39_21020"
     CDS             2500..3060
                     /locus_tag="VHX39_21020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030428 - cell septum [Evidence IEA];
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family nucleotide pyrophosphatase"
                     /protein_id="HEX3993660.1"
                     /translation="MVLASSSPRRLTLLAQIGITPCAIIAPDIDETPVRTELPRPYAQ
                     RMARAKADAVAVPGRFVLAADTVVAVGRRILPKAATEQEARICIDLLSGRRHHVLTAV
                     VLTAPDGRRAERLSDSVVAFSRLTEPQKRAWLALGEWDGKAGGYAINGAAAMFVRFLS
                     GSFSGVVGLPLFETAQLFRGFGWPMA"
     gene            3063..>3334
                     /locus_tag="VHX39_21025"
     CDS             3063..>3334
                     /locus_tag="VHX39_21025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003622228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993661.1"
                     /translation="MPRAPDSVAANRKVTIHAAWSPGEVRVAAIADGSLVDYAIWRPG
                     APDGVGDIYRGRVNGVVPAMAGAFVVLPGYGGGTSSGLTELEGFLP"
BASE COUNT          548 a         1060 c         1119 g          607 t
ORIGIN      
        1 ttctttttgc cccgacttcc gttaatatcc taccatgtcc atcgcgactc tgcctcacgg
       61 aagccccggg tctcacggaa gcgccgagtc tcacggaagc gccgagtctc catcccgcat
      121 tcgcctgttg ccggagacca ccgttaaccg catcgccgcg ggtgaagtta ttgaacggcc
      181 ggcggcggcg gtgaaggagc tggtggaaaa tgccctggat gccggagccc gccgcatttc
      241 gatcgcactg gtcgggggcg gcatcgaccg gatcgaggtc accgacgacg gatcaggcat
      301 gaccgcagaa gaactcggct tgtgcgtgct gcgtcatgcg acctcaaaac tgaacgacga
      361 cacgctcatc cgaatcgata cgctgggatt tcgcggtgag gcgctgccct cgatcggcgc
      421 tgcggccagg ctcgaggtca cctcgcggcc gcggggcagc gaaggagggc acgccaacgc
      481 aatcacggtc gaaggcggcg tcgttggtca ggtggtaccc gccgccgggg cgcccggcac
      541 acgcatcgtg gtgcgggatt tgtttttcgc aacgccggca cgccggaagt ttctgaagca
      601 tccacgcact gaggcggagc atgccgaggc cgtggtccgc cgtctggcca tggcggcccc
      661 ggatacggcg ttccgcctgg aaaatgaagg ccgggttatc ttcgacctgc ctgcgcagga
      721 gcgtgcgccg agagtggcgg ccctgttagg caccgaagca gccgcctcca tgctgccggt
      781 gcgcgaggta cgcgcagtcg cacgtggtgg gccagcccgg caaggccagc cagccagcga
      841 aggtcaggta gcgggtcagg atgactcccg gggcgaaatg gtgctcagcg gctacctgtg
      901 cgccccaaca atttcgcgga tgaccgcagc ggcgcaaggg ctggtggtga acggcaggcc
      961 ggtggcagat ccggtattga agaccgccgt gcgcgtggcc taccgggacg tgatcgcgca
     1021 tggccggcat ccggtggtgg ctctctggct cgatctgccg ccggaggaac tggacgttaa
     1081 cgtgcatccg gccaagaccg agctgcggtt ccgcgatccg gccgcggtgc gctcgttggt
     1141 catcggggct ttgagccggg tcctggccgg tgcggccggg accgacatgc ctgggccggg
     1201 attaatgcaa catcgtcctg ccctgaattt ggcgtggtcg cgacccccgg cacgcggtgg
     1261 cattcgggcc cttccgctgc ccggatttcc acgcgaggcg gcgcccccgc caccggggat
     1321 gtcggaaacc gtgttgacgc cggcctatgg gccgaatgcg agctggcaca cgtcacctgg
     1381 gacccccggg gacacgggtt tcccgggctc gtccggatcg gacgcgggct cgccatccgg
     1441 ggctttggat tttgttgcac ctccggtagc gcgcaccgtg caagtgccgg gttcagcgca
     1501 ggattacccg ctcggtgccg ccgtggcgca ggtactggat acttacatta tcgccgtggc
     1561 ggccgatggc acgctgattc tggtcgatca gcatgccgcg catgaacgcc tgacccacga
     1621 agcgatccgc acgcgcatgc tggatggcgg tgcgtcgggt cagccactgc tgctgcctgc
     1681 cgttgtcgat ctgccggagg cggacgcaag caggctactc gcccgcgcga tcgaccttgc
     1741 acagcttggc ctggagatcg aatcgttcgg cccgggtgcc gtgctggtgc gcgctttgcc
     1801 agtcgcactc ggcgcaccgg agccagcacc gctcattcgc gacatcgccg acgaactcgc
     1861 cgagctcgat gagacgatgg cgttgtcggc gcggcttgac gcagtgatcg cccgtatggc
     1921 gtgtcacggc agcatccggg ccggccgccg actgggccag gccgagatgg acgcgctgct
     1981 gcgtcagatg gaggcaacgc cccgggccgc gacgtgcagc cacgggcggc cgacgtttct
     2041 ccgtctgtcg aaggccgaaa tcgagacgct gttcggccgc cggtgacgcg gccacgggcc
     2101 atcctgttgt catcgccatc gggtggccgc tgtgcaagaa accgcgctgg ttcttgacct
     2161 tcgtcctgac cgcgcccatg gtctgcgccg ctcgtaacaa tccgaagagg gctgatgtcg
     2221 aaagaagata tgatcgaatt cagcggcacc gtaatggagt tgctgcccaa tgccatgttt
     2281 cgtgtgaaac tggacaacga acattccatc ctggcgcaca ccagcggcaa gatgcgcaaa
     2341 aatcgcattc gcgtgctcgc gggtgaccgg gtcaatgtcg agatgacgcc ctacgacctg
     2401 tccaaggggc gcatcacatt tcgtttcaaa taacgggcac cgccgatatc ctcaagcgcc
     2461 acgcgcccag ctgatctggc cgaagggaat tcacccgcgc tggtgctggc atcgtccagt
     2521 ccgcgtcgcc tcacgttgct ggcgcagatc ggcatcacac cctgcgcaat cattgcacct
     2581 gatatcgacg aaacgcccgt gcggaccgag ttgcctcggc cttacgctca acgaatggcg
     2641 cgcgcgaaag ccgacgcggt cgccgtgcca ggccggttcg tcctcgccgc cgatactgtg
     2701 gtggccgtgg gaaggcgcat cctgcctaag gcggcaaccg agcaggaggc gcgtatttgt
     2761 atcgacctcc tatccggccg ccgtcatcac gtactgaccg ctgtcgtgtt gaccgctccg
     2821 gacgggcgcc gcgctgaacg cctgtcggac agcgttgtcg ccttctcccg cctgaccgag
     2881 ccgcagaaac gtgcctggct ggctttgggc gagtgggacg gcaaggccgg tggttacgcg
     2941 atcaacggag cggcggcgat gttcgtgcga tttttgtccg gcagtttttc cggcgtggtc
     3001 gggttgcccc tgtttgaaac cgcacagctg tttcgtggtt tcggttggcc catggcctga
     3061 gcatgcctcg tgcgccagat tctgttgcgg caaatcgaaa agtcaccatc catgccgcct
     3121 ggagtcccgg cgaagtaagg gtagcagcga tcgcagatgg gtctctcgtc gattatgcga
     3181 tttggcggcc aggggcaccc gatggtgtcg gcgacatata ccggggccgg gtcaacggcg
     3241 tcgttcccgc gatggccgga gccttcgtcg ttctgccagg ttacggcgga ggaacttcgt
     3301 ccgggctgac agaactcgag ggtttcctgc ccga
//
LOCUS       DATAVD010001102         1700 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2154212, whole genome shotgun sequence.
ACCESSION   DATAVD010001102 DATAVD010000000
VERSION     DATAVD010001102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2154212"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(218..943)
                     /locus_tag="VHX39_21030"
     CDS             complement(218..943)
                     /locus_tag="VHX39_21030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014242093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016657 - obsolete oxidoreductase
                     activity, acting on NAD(P)H, nitrogenous group as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HEX3993662.1"
                     /translation="MQSFTQPTHADLVDRAITSRRSVRAFLSTAVPRGVIAEILDAAA
                     RAPSGTNMQPWRGYVLIGAPRDALCAAVQTVFDAVEAGHQQEVQYYPDAFFEPYLSRR
                     RKVGWDLYGKLAIGRGDAAKMQAQHRRNFQFFDAPVGMIFTIHRDLATGSWLDYGMFL
                     ENVMVAARARGLDTCAQAAWSRFHKVIRPILGLTPAEVVVCGMALGYADPDAPENGLV
                     TERVTSADFMSWHGFDPTITEHT"
     gene            1037..>1700
                     /locus_tag="VHX39_21035"
     CDS             1037..>1700
                     /locus_tag="VHX39_21035"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3993663.1"
                     /translation="MVQIRQMGPQIGVEVSGVDVRTLDDAGFAPIYQAWLDHNVLVVT
                     GQELTIPEFLHYSRRFGHVTPHPSKSTRHPDHPDITLLGVNKFKPDGQLNQSIYRRGA
                     EGWHTDGAYDPVPFKATQLYALAIPDTGGDTLFASGYAAYEALPARLKTRLDGINGLF
                     SYGGRRKAQALLNAEDRDVPPAVHPIVRTHSETGRKSLYYDPGKILSIEGAVQAESDD
                     LIS"
BASE COUNT          348 a          555 c          471 g          326 t
ORIGIN      
        1 cgtcctccgc cgcttgtgac gcaattgcgt cactcctgat gtggcgtcga cggcgacctc
       61 tgtaaacgat tattttccag gccgggattc ttgccaacca ccaaatctgg cagtttcggc
      121 ccttctgccc accatatctg cgattgcctc ctggctgtgg caccgcggcc acgcgtttcc
      181 cgtgtgttct ccccaggttc cacaaccata gcatgttcta tgtatgttcc gtaatggtag
      241 ggtcaaaccc gtgccaactc atgaagtccg ctgatgtcac tcgctcggtc accaacccgt
      301 tctccggagc gtccggatcg gcatagccca gtgccatgcc gcagacgacg acctcggccg
      361 gagtgagccc caatatcggc cggatcacct tatggaagcg cgaccacgcc gcctgggcgc
      421 acgtgtccag cccacgggcc cgcgccgcga ccatgacgtt ctccaggaac atcccgtagt
      481 cgagccacga ccccgttgcg agatcgcgat gaatggtgaa tatcatcccc accggcgcat
      541 cgaaaaactg gaaattccgc ctgtgctggg cttgcatctt cgccgcatct ccccggccga
      601 tcgccagctt gccgtacagg tcccagccaa ccttacgccg tcgagacaaa tacggttcga
      661 agaatgcatc aggatagtat tgcacctcct gctgatggcc ggcctccaca gcatcgaaca
      721 ccgtttgcac tgcagcacaa agagcgtccc gaggtgcgcc gatcaataca taaccgcgcc
      781 aaggttgcat gttcgtgcca cttggcgccc gcgccgccgc atccaggatc tcggcgatga
      841 cgccacgcgg cacggcagtc gacaggaaag cgcgcaccga acgacgcgag gtaatcgcac
      901 gatcgaccaa atcagcatgc gtgggttgag tgaatgactg catcaatgtt gctccgttcc
      961 gggcagacta tcggcgcatc agacttgacg ctaccggcgg gatggtgcgc agatttcgta
     1021 tcaggaggtc actcgcatgg ttcaaatccg ccagatgggt ccgcaaatcg gcgtcgaagt
     1081 cagcggcgtc gatgtcagga ccttggacga tgccggcttc gctccgatct atcaggcgtg
     1141 gctcgaccac aatgtcctgg tggtgaccgg acaggagctg acgatccccg aattcctgca
     1201 ctacagccgc cgcttcggtc acgtcacgcc gcacccgtcc aaaagcacgc ggcatccaga
     1261 ccatccggac atcactctgc tgggcgtcaa caagttcaag ccggacggtc agctgaacca
     1321 gtcgatttac cgccgtggcg ccgagggttg gcataccgat ggtgcttatg acccggtccc
     1381 gttcaaggcg acccaacttt acgcactggc gatccctgat accggcggcg atactctgtt
     1441 tgccagcggt tatgccgcgt atgaggcgtt gccagcgcgg ctgaagacca gactggacgg
     1501 catcaacggc ctatttagtt acggtggtcg aagaaaggcg caggccttgc tcaacgcgga
     1561 agaccgggac gtccccccag ccgttcatcc gatcgtccgc acccacagcg agaccgggcg
     1621 caaatcgcta tattacgatc ccggcaagat cctttcgatc gaaggtgccg ttcaggccga
     1681 aagcgacgac ctgatcagcg
//
LOCUS       DATAVD010001103         2332 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2712959, whole genome shotgun sequence.
ACCESSION   DATAVD010001103 DATAVD010000000
VERSION     DATAVD010001103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2332
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2712959"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..605
                     /locus_tag="VHX39_21040"
     CDS             <1..605
                     /locus_tag="VHX39_21040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HEX3993664.1"
                     /translation="VAQTAPRITIINVPKEKIREVIGTGGKVIREIVEQTRCKIDIDD
                     DGTIKIAAVDSEQAQKAIDWIRGIVAEPEIGVIYNGKVVKTADFGAFVNFLGSKDGLV
                     HISELTQGRVGKTTDVVNQGDAVKVKVIGFDDRGKVKLSMRVVDQATGADITDQVGAK
                     PARGGEGGDRGERGGFRGERRDRFERSPSPEGDPQPVIGD"
     gene            770..2182
                     /locus_tag="VHX39_21045"
     CDS             770..2182
                     /locus_tag="VHX39_21045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019088547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEX3993665.1"
                     /translation="MRAINAIRMGGGDVLPLVEGGKGVSISNGLSAGNWALAGGVGTF
                     SAVNADSFDVNGQAIPQVYHGRTRRERHEELVNYAIQGALTQARRAWEVTGGKGRIHA
                     NILWEMGAAERIITEVLEQAKGLIHGITCGAGMPYRLSDIAARFNVYYYPIISSARAF
                     NALWKRAYSKTAELLGGVVYEDPWLAGGHNGLSNSENPQKPEAPYPRVVALRKTMNEF
                     GLNETPIIMAGGVWCLEEWENWIDNPDLGPVAFQFGTRPLLTQESPIGNAWKHRLLTL
                     KEGDVFLNRFSPTGFYSSAVSNGFLAELRERSERQVAFTTETIGEHVAEYGVGPRKRI
                     VYLTYADRERALAWERQGFTDALRTPDSTLIFVTPEKAREILEDQTACMGCLSSCRFS
                     NWAQHEPDFTNGKKADPRSFCIQKTLQDIAHESDEPAAVERNLMFSGHNAYRFGKDPF
                     YSNGFIPTVKQLMERLLTGR"
BASE COUNT          484 a          723 c          754 g          371 t
ORIGIN      
        1 atgtcgcgca aaccgcgccc cgcatcacca tcatcaacgt gccgaaggag aagatccgcg
       61 aggtaatcgg caccggcggc aaggtgatcc gcgagatcgt cgagcagacc cggtgcaaga
      121 tcgacatcga cgacgacggc acgatcaaga tcgctgccgt cgattccgag caggcgcaga
      181 aggcgatcga ctggattcgc ggcatcgtcg cggagccgga gatcggcgtg atctacaacg
      241 gcaaggtggt gaaaaccgcc gatttcggcg ccttcgtgaa cttcctcggg tccaaggacg
      301 gtctcgtcca catcagcgaa ctgacccagg gccgagtcgg caagacgacg gatgtggtca
      361 accagggtga cgcggtgaag gtcaaggtca tcggcttcga tgaccgcggc aaggtcaagc
      421 tgtcgatgcg ggtggtcgat caggcgaccg gcgctgacat caccgaccag gtcggcgcca
      481 agccggcccg cggcggagaa ggcggcgatc gtggcgaacg cggcggtttc cgcggtgaac
      541 gccgggaccg gttcgaacgt tcgccctccc ccgaaggtga cccgcagccc gtgatcggtg
      601 actgaaccga tcacaatctg gcctataatc acacggaaat gcttgcatcc ttcagcgggc
      661 ggcgtatcgg tttgccgata ggccgcctct gacggagcac aaaaactagg ggtcgcaggg
      721 accccaaagg ctccccaggg ggattggcct tacgagggaa cacacggcca tgcgagcgat
      781 caacgcgata cggatgggcg ggggcgatgt cctgccgctg gtggaagggg gcaagggcgt
      841 ctccatctcc aacgggctat cggccggcaa ttgggcgctg gccgggggcg tcgggacttt
      901 cagcgcggtt aatgccgaca gcttcgatgt gaacggccag gcgatccccc aggtttatca
      961 cggccgcacg cggcgggagc ggcacgagga actggtcaac tacgccatcc agggcgccct
     1021 gacgcaggcc aggcgcgcgt gggaggtcac cggcggcaag ggccgcatcc atgccaacat
     1081 cctgtgggag atgggcgcgg ccgaacgcat catcaccgag gtgctggagc aggcgaaggg
     1141 cctgatccac ggcatcacct gcggcgccgg catgccctat cgcctgtccg acatcgccgc
     1201 caggttcaac gtctattact atccgatcat atcctccgcc cgagccttca atgcgttgtg
     1261 gaaacgggcg tattccaaga cggccgagtt gctgggtggt gtggtctacg aagacccctg
     1321 gctcgccggc ggccataacg gcctgtccaa cagcgagaac ccgcaaaaac cggaagcccc
     1381 gtatccccga gtcgtcgcgc tgcgcaagac gatgaacgaa ttcggtctga acgaaacccc
     1441 gatcatcatg gccggcggtg tctggtgcct ggaggaatgg gagaactgga tcgacaaccc
     1501 cgacctgggt ccggtcgcct tccagttcgg cacccgtccc ctgctgacgc aggaaagccc
     1561 gatcggcaac gcctggaagc accgcctgct gaccttgaaa gagggcgacg tcttcctgaa
     1621 ccggttcagc ccgaccggtt tctactccag cgccgtcagc aacgggttcc tggccgaact
     1681 acgtgaacgc agcgaacgcc aggtcgcgtt caccacggag accatcggtg agcatgtggc
     1741 ggagtatggt gtcggcccgc ggaagcggat cgtctacctg acctacgccg accgggaacg
     1801 cgcgctggcg tgggaacgcc agggtttcac ggatgccctg cgcacgcccg attcgacgct
     1861 gattttcgtc acgccggaaa aggctcggga aatcctggag gaccagaccg cctgcatggg
     1921 ctgcctgagt tcctgccgct tctccaactg ggcacagcac gagccggact ttaccaacgg
     1981 caagaaggcc gatccgcgca gcttctgcat tcagaagacg ttgcaggaca tcgcgcatga
     2041 gagcgacgaa ccggcggcgg tggaacgcaa cctgatgttc agcgggcaca acgcctatcg
     2101 gttcggtaag gacccgttct attcgaacgg tttcatcccg acggtgaagc agttgatgga
     2161 gaggctgctg accgggcggt agacccgccg ccgatatcca caaaggcaga agtcattggc
     2221 ttgtccgttc gcctgatgca ccaacgcggc gccagagcac ccagtgttcg gtttcctcga
     2281 caaccgcaaa acgtgaccgc aatgccgaac cgtaaatccg cataagggcg ag
//
LOCUS       DATAVD010001104         3608 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_666586, whole genome shotgun sequence.
ACCESSION   DATAVD010001104 DATAVD010000000
VERSION     DATAVD010001104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3608
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_666586"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..735
                     /locus_tag="VHX39_21050"
     CDS             <1..735
                     /locus_tag="VHX39_21050"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3993666.1"
                     /translation="KIPNLAGLLPRFMFYDGYGAAFAISTGGIVYNPQTMKPLVSYAD
                     LWEPRFRGRFLMMSPKATQSLYLLIATASFMTGKPLKEAQYEIDTVWPKMAELKANVL
                     STYDSPSQIMMVAQGQVDVAGIEYSKNIYPYTIQGAPLDMCFPKEGTFAGINCLSFVK
                     GGPEPELAAAFINRMLEPAVQQGLATATLTSPSVKGATFAPEIGKYIAYPEAKMDAMG
                     LFAADWAFINPRRPGWLEKYNQVFGS"
     gene            738..1862
                     /locus_tag="VHX39_21055"
     CDS             738..1862
                     /locus_tag="VHX39_21055"
                     /inference="COORDINATES: protein motif:HMM:TIGR01187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3993667.1"
                     /translation="MDSELPLPGFIAPPKTRSTTVRLHELSKHYGAQLAVDALSLTIE
                     PGSMLALLGPSGCGKTSCLRMIAGLVPPSSGEIFVDGKRITATPVHRRNIGLLFQNYA
                     LFPHMTVAENVAFGLQARRRPKAETAARVAGALQLVQLSGYADRMPSQLSGGQQQRVA
                     LARCLVVEPSLLLLDEPLGALDKSLRENMQVELRALQQRLGITTIMVTHDQDEALTLA
                     DQVAIMRNGRLEQLGSPAEVYRQPVSRFVAGFIGVSNFFRGRVERSGYATTSSGVMLT
                     VAGQSVGDDVTIALRPEAVTIAPATPSTGPDSVLATVEQVVYRGFISHTYLRLDNGET
                     LIVFQSNQPGSAGGPSVVPGARVLACWSAASNCVVREATN"
     gene            1920..3113
                     /locus_tag="VHX39_21060"
     CDS             1920..3113
                     /locus_tag="VHX39_21060"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3993668.1"
                     /translation="MLNRYRGAALVALLLGLSAAQAKAETPGITATEIKIGQNAPFSG
                     PASVYGQISTAETAYFKMINDEGGINGRKIVHIALDDGYIPPKSLEVVRRLIEQEQVA
                     ILFQTIGTAPNIAIRKYVNLKKVPDIWLGSGASTFVADIKDFPWSIPFQPSYRLEGQM
                     YAQFILKTKPDAKIGILYQNDDLGRDYVAGLKDGLGEKFDKMVVKSASYEVTDPTIDS
                     QVLDLKSSGADVFFDASTPKFSAMSIRKAADLDWHPLHIIDSNGALVRPALTSAGLDK
                     SVGVVTAQYLKDPTDPAWDNDPGMKEFMAWRAKYAPESDLANPVWVYGYTMAQALVVV
                     LKQAGTDLTRESIMKAATNLPDTTTLSMVLPGIKISTSPTDYRAMKGLRLVRFVGTMY
                     KLLPE"
     gene            3136..>3608
                     /locus_tag="VHX39_21065"
     CDS             3136..>3608
                     /locus_tag="VHX39_21065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993669.1"
                     /translation="MIGDSKGAFPGIAYRNDADLKAWLAKRPTEAALEPELPIIDPHH
                     HFWDTPARGKYFLPELLADIGGGHNIVSTVFLECGAMYRKTGPREMAPVGEVEFVNGI
                     AAMSASGNYGPCRVAEAIVGHADLTLGARVRDVLEAQVKVGGGRFRGIRYGVSWD"
BASE COUNT          740 a         1016 c         1113 g          739 t
ORIGIN      
        1 aagatcccca atctggccgg tctgctgccg cggttcatgt tctacgatgg ttacggtgcg
       61 gccttcgcga tttccaccgg cgggattgtc tacaacccgc aaacaatgaa acctctggta
      121 tcgtacgccg atttgtggga accgcgattc agggggcgct tcctgatgat gtcgccgaaa
      181 gcgacacaga gcctgtatct gctgattgcg acggcaagtt tcatgaccgg caagccgttg
      241 aaggaagcgc aatatgaaat cgatacggtt tggccaaaaa tggcggaact gaaagccaat
      301 gtgctgagca cttacgacag cccgtcgcag atcatgatgg tggcgcaagg tcaggtggat
      361 gtcgccggca tcgagtattc gaaaaatatt tatccgtaca ccatccaggg ggcgccgttg
      421 gacatgtgct ttccgaaaga aggcacgttc gccggcatca attgcctgag tttcgttaaa
      481 ggcggaccgg aaccggaact ggccgcagcc ttcatcaacc gaatgctgga gcctgcggtc
      541 cagcaaggcc tggcgaccgc caccctgacc tcgccctcgg tcaagggtgc cacgttcgcg
      601 ccggagatcg gtaaatacat cgcctatccc gaagcgaaaa tggacgcgat gggtttgttc
      661 gcggccgact gggcttttat caatccgcgc cggccgggct ggttggagaa atataatcag
      721 gtgttcggaa gctgaacgtg gattccgagc ttccactgcc aggattcatc gcaccgccaa
      781 agacgcgttc gaccaccgtc cggttgcacg aactcagcaa gcattatggc gcgcaattgg
      841 cggttgacgc tctgtcgctg accatcgagc ccggcagcat gctggcactg cttgggccaa
      901 gcggctgtgg caaaaccagc tgtctgcgga tgatcgccgg ccttgtgcca ccgagttccg
      961 gcgagatttt cgtcgatggc aagcggatca ccgccacacc ggtgcatcgc cgtaacatcg
     1021 gcctgctgtt ccagaattac gcgctgtttc cacatatgac ggttgccgaa aatgtcgcct
     1081 ttggactgca ggcacgacgg cggccgaaag cggagaccgc agcgcgggtc gccggcgcgt
     1141 tgcagctggt acaactcagc ggttacgcgg atcgtatgcc gtcacagtta tcggggggcc
     1201 agcaacagcg cgtggcactg gcacgctgtt tggtggtcga accctcgctg ctgttgctcg
     1261 atgaaccgct gggtgcactg gacaaaagcc tgcgtgaaaa catgcaggtc gagttgcgcg
     1321 cgctgcaaca gcgtcttggc attaccacaa tcatggtgac gcacgatcag gatgaggcgc
     1381 tgaccttggc tgatcaggtc gcgatcatgc gcaacgggcg gctggaacag cttggttcgc
     1441 cggccgaggt gtatcggcag ccggtatcgc gcttcgttgc cgggttcatc ggcgtgtcaa
     1501 acttctttcg tggccgggtc gagcggtctg gctacgcaac cacatcgtca ggggtgatgt
     1561 tgactgttgc cggccaatcg gttggcgacg acgtcacgat cgctttgcgt ccggaagccg
     1621 tgacaattgc accagccact ccgtcgaccg ggcctgacag cgtgctcgcc accgtcgaac
     1681 aggtcgtata tcgcggcttc atcagtcata cctatctgcg attggacaat ggcgagacgc
     1741 tgattgtctt tcagtcgaac cagccgggat ccgccggtgg cccgtcggtt gtgcctggcg
     1801 cgcgtgtgct ggcatgctgg agcgctgcca gcaactgcgt tgtacgcgaa gcaaccaact
     1861 gagcttgcgc tgtcgccagg cttctcccag actacggcgc ataatcggga gaagacgtta
     1921 tgctcaaccg ctaccgcggc gccgctttgg tcgcgctact gcttggatta tcggcagcac
     1981 aggccaaagc tgagacgccg gggatcactg cgaccgagat caagattggc cagaatgcgc
     2041 cgtttagtgg gcccgccagc gtttatgggc agatctccac cgcggaaacc gcctatttca
     2101 agatgataaa cgacgagggc ggcatcaacg gccgtaaaat cgttcatatc gcgctcgatg
     2161 atggttatat cccgcccaaa tcgcttgagg tcgtgcgccg cctgatcgag caggaacaag
     2221 tcgccattct gttccagacc atcggcaccg cgccaaatat cgccatccgt aaatatgtca
     2281 atttgaagaa ggttcccgat atctggcttg gctcgggcgc gtccacgttc gttgcggata
     2341 tcaaagactt tccgtggagc attccattcc agccaagcta tcggctggag ggacagatgt
     2401 atgcgcagtt catcctgaag accaaacccg atgcgaagat cggcattctc taccagaacg
     2461 acgatctggg tcgcgattat gtcgcagggt tgaaggatgg tctgggcgaa aaattcgaca
     2521 agatggtggt gaaatccgcg tcctatgagg tcaccgatcc aaccatcgac tcgcaggtgt
     2581 tggacctgaa atcgtcaggt gccgatgtat tcttcgatgc cagtacgccg aaattctctg
     2641 ccatgtcgat ccgcaaggct gcggatctgg actggcatcc gctgcacatc atcgactcca
     2701 atggcgcctt ggtgaggccg gcgctgacct cggccggact cgacaaatcg gtgggcgtgg
     2761 tgactgcgca gtacttgaaa gacccgacgg atccagcctg ggacaacgat cccgggatga
     2821 aggagttcat ggcgtggcgc gcgaaatatg cacccgagag cgatctcgcc aatccggtct
     2881 gggtttatgg ttacaccatg gcacaggctc tggtggtcgt tctgaagcag gctggtactg
     2941 acctgactcg ggagagcatc atgaaggctg cgaccaacct tcccgatacg accacgctgt
     3001 cgatggtttt gccgggcatc aagatcagca catcgccgac ggattaccgg gcgatgaagg
     3061 ggctgcggtt ggtgcgcttc gttgggacga tgtacaagct tttgccggaa tgacagacaa
     3121 gggggagacc ggagcatgat cggagactcg aaaggcgcct ttccaggcat cgcataccgt
     3181 aacgacgccg acctgaaagc ctggctggcc aagcggccca cggaggccgc gctggaaccg
     3241 gaattgccga tcatcgatcc gcatcatcat ttctgggata cgccggcgcg tggaaaatac
     3301 tttctcccgg aactgctggc cgacatcggt ggcggccaca acatcgtttc gacggtcttc
     3361 ctcgaatgcg gtgcgatgta tcgcaagacc ggcccgcgcg agatggcgcc tgtcggtgag
     3421 gttgaattcg tcaatggcat cgcggcaatg agcgcgtcgg gaaattacgg tccctgccgg
     3481 gttgccgagg cgatcgttgg ccatgcggat ctgactctgg gcgcccgcgt gcgggacgtg
     3541 ctggaggcgc aggtcaaggt cggcggcggc cggttccgcg gcattcgtta cggcgtgtcg
     3601 tgggatga
//
LOCUS       DATAVD010001105         2333 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_478442, whole genome shotgun sequence.
ACCESSION   DATAVD010001105 DATAVD010000000
VERSION     DATAVD010001105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478442"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..319)
                     /locus_tag="VHX39_21070"
     CDS             complement(<1..319)
                     /locus_tag="VHX39_21070"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3993670.1"
                     /translation="MFARLHVMLIKEFLQIRRDPWALFFLVVPLLIQVVLFGYAANFS
                     VNHVATVVLDLDRSQVSRELISHFAANGRFDVVDVATNDNQVTSDIDAGRVAVALVIH
                     AGFA"
     gene            complement(323..1459)
                     /locus_tag="VHX39_21075"
     CDS             complement(323..1459)
                     /locus_tag="VHX39_21075"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3993671.1"
                     /translation="MNPGRIFAIAFKETLQVWRDPRSLAMALLMPVMQLGLLGYGVSL
                     DIKRVEVCVHDQERSQVSRELVERLTASDWFRIAAKLRDERAVRSAMNSGDCVAAVTI
                     PVNFSRILATTGKATVQTVFDATDVNTTNIATGYARGIVAIATADFEKRWAASHGLRM
                     QTIGVVDLEPRVWFNEGLDSRNFIIPGVVAIILSLVGAQLTSLTVAREWERGTMEQLI
                     STPVTALEFMLGKLVPYFMIGLFDAAFCLLAAAFWFQVPFRGGLFTLILTTALFTLVV
                     LGIGYLVSVRVRDQRGASQVALMLTMLPTTLLSGFTFPIDQMPQALQAVTWVVYARYY
                     VTILRAVFLKGSTIVDLAAPVLALVVCAVVIMWAAARSFHKRLD"
     gene            complement(1456..>2333)
                     /locus_tag="VHX39_21080"
     CDS             complement(1456..>2333)
                     /locus_tag="VHX39_21080"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3993672.1"
                     /translation="TAVDHLDLTIAKGEIVGFIGPNGAGKSTTIRMLCGLLRPSAGRA
                     VVAGYDVGREPETVRAHIGYMSQKFSLYGDLTVQENLRFFGGLYLVPRREMNERMQTA
                     VSMAGLEGREDALVRTLAGGWKQRLALGCAILHRPPVLFLDEPTSGVEPEARRRFWEL
                     IHHLASDGVTILVSTHYMEEAEYCNRIALINAGHLVAAGGPGQLRRQELGGVLFDMEC
                     SAAGAALPILQQAPGVIDVTIFGDRLHLLLHSTDAAAGLPPFLARHGIACGPPRAITP
                     SLEDVFVQLVTRPPA"
BASE COUNT          509 a          741 c          689 g          394 t
ORIGIN      
        1 gcgcgaagcc ggcgtggatt acgagcgcca ccgccacccg gccggcgtcg atatcgctgg
       61 tcacctggtt gtcgttggtc gcgacatcga cgacatcgaa gcgtccgttc gcagcgaaat
      121 gcgatatcag ctcgcggctg acctggctgc gatcgagatc aagcaccacc gtcgccacat
      181 gattgacact gaagtttgcg gcatagccaa acagtaccac ctggatgagc agcggcacga
      241 ccagaaagaa caaagcccag ggatcgcggc ggatttgcag gaattccttg atcaacatga
      301 cgtggagacg tgcgaacatc ggctaatcca gccgcttgtg gaacgatcgc gcggcagccc
      361 acataatgac cacggcacag acaaccaggg ccagcaccgg tgccgcgaga tcgacaatcg
      421 tgctgccctt caggaacacc gcccgtagaa ttgtcacgta gtaccgcgcg tagaccaccc
      481 acgtaaccgc ctgcagtgcc tgcggcattt gatcgatcgg gaaggtaaag ccggacagta
      541 aggtcgtggg cagcatggtg agcatcagcg cgacctgact ggcgccacgt tggtcgcgaa
      601 ctcggaccga gaccagatag ccgatcccca ataccaccag agtgaacaac gccgttgtca
      661 ggatgagcgt aaacagcccg ccgcgaaacg gcacctggaa ccagaaagcc gcggcgagca
      721 gacaaaatgc cgcgtcgaac aggccaatca tgaaataggg caccaacttg ccgagcatga
      781 attccagcgc ggttaccggt gtcgaaatga gttgctccat ggtgccgcgc tcccactcgc
      841 gtgccaccgt gagcgacgtc aactgcgccc cgaccagcga gagaatgatc gccaccacgc
      901 cgggaatgat gaaattgcga ctgtccagcc cttcgttgaa ccaaacccgt ggttcaagat
      961 cgacgacgcc gatggtttgc atgcgcaacc cgtgcgatgc ggcccatcgt ttctcaaagt
     1021 ccgcagtcgc tatggcgaca attcctcggg catagccggt ggcgatgttc gtggtgttca
     1081 cgtctgtcgc atcgaacacc gtctgcaccg tagctttccc ggtcgtagcc aggatccggg
     1141 aaaagttgac cggtatcgtc acggctgcaa cgcaatcacc actgttcatc gcactgcgaa
     1201 ccgcacgctc atcccgcagt ttggcagcga tccgaaacca gtcggaggcg gtcaaccgct
     1261 ccacgagttc gcggctgacc tggcttctct cctgatcgtg cacgcaaact tcgacacgtt
     1321 tgatatcgag gctaacgccg tagccgagca accccaattg catcaccggc atgagcagag
     1381 ccatcgcgag gctgcgcgga tcgcgccaca cctgcaacgt ctccttgaag gcgatggcga
     1441 aaatgcgtcc cgggttcatg ctggcggacg ggtcacgagt tgcacgaaca cgtcttccag
     1501 gcttggcgtg atggcccgtg gcggcccgca cgcgatgccg tgccgcgcga gaaacggagg
     1561 cagaccggcg gctgcatcgg tgctgtgcag caacaaatga agcctgtcgc cgaagatcgt
     1621 cacgtcgatc accccgggcg cctgctgcaa aatcggcagc gcagcaccgg ccgccgaaca
     1681 ctccatgtcg aacaatacgc cgcccagttc ttggcggcgt aactggccgg ggccgccggc
     1741 ggcgacgagg tggccagcat taatcagcgc aatgcggtta caatactcgg cttcttccat
     1801 gtaatgggtc gacaccagga tcgttacgcc atccgaggcc aggtgatgga tcagttccca
     1861 gaaccgccgc cgcgcctccg gctccacgcc tgaggttggt tcatccagaa acagcaccgg
     1921 aggccgatgt aaaatcgcgc acccaagagc gagccgttgt ttccaccccc ctgccagggt
     1981 gcgcaccagc gcatcctcgc ggccctccag tccagccatg ctgacggccg tttgcatccg
     2041 ttcgttcatc tcgcgccgcg gcacgaggta aagaccaccg aagaagcgca aattttcctg
     2101 cacggtcagg tcgccataaa gcgaaaattt ctgcgacatg tagccaatgt gggcgcgcac
     2161 agtttccggc tcgcggccga catcgtagcc ggcgaccacg gcgcggccgg cactgggtcg
     2221 cagcaggccg cacagcatgc ggatggtggt cgatttaccg gcaccattgg ggccgatgaa
     2281 gccgacgatc tcgcccttgg cgatcgtcag gtcgagatgg tcgacggcgg tga
//
LOCUS       DATAVD010001106         2273 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3268157, whole genome shotgun sequence.
ACCESSION   DATAVD010001106 DATAVD010000000
VERSION     DATAVD010001106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3268157"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..904
                     /locus_tag="VHX39_21085"
     CDS             <1..904
                     /locus_tag="VHX39_21085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003617934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993673.1"
                     /translation="AVTDGQPRVLTIERAEALPSGPFEAGHRSLQAGLRSWVETQTHH
                     PLGYVEQLYTFADQDRKQGTLGRVVSVSYLGLTREAPVMAGWDAAWQPWYRFFPWEDF
                     RGPGAALGESILAPPLYDWADSATDPATQRVRRHRITLNFGLRGQRWNEELVLQRYEL
                     LWEAGLVAEGRQSTLHPAAPPLSETLTEALGEPMRHDHRRILATGIARLRAKIKYRPV
                     VFELMPPEFTLLQLQRTVEALAGRLLHKQNFRRLIDQQDLVEETGEVTTGTGGRPAKL
                     FRFRREVLAERQVAGTKLPLVRAV"
     gene            993..1436
                     /locus_tag="VHX39_21090"
     CDS             993..1436
                     /locus_tag="VHX39_21090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993674.1"
                     /translation="MGTPATRAVLGFIAAAISVLTFHQAMWEALHVLNLPGLGMPPAY
                     PTRPVPPFGVPLILDLCFWGGLYGIVFGLLVPRMTAPLWLCGLVLGIIAALVGLLVVP
                     AIKGLPIGAGWVPLNWLRSLLINGFWGIGVGIILPLILRRQPRLA"
     gene            complement(1454..>2273)
                     /locus_tag="VHX39_21095"
     CDS             complement(1454..>2273)
                     /locus_tag="VHX39_21095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993675.1"
                     /translation="GLPASFQQFNRSGADTVLLSSEDFTYATDAEVRRLHALMAGQPA
                     TVVFYCRRWSELIPSCWRESVKHGSLSTLPEYVLACLGNPTNSPIVDFRHILDRFAAV
                     FGQDSIRLVSYNSVLEAGEDLLTHFCRGFLSWPDPPPTDLGRVNVSLDMVDSEMIRTL
                     NTLGWTQFREGFPLLHEKYLAAKADLPVRWIVEKSMQFVVNTLPIDDGAPALALLHDD
                     IVKRYRTALMPPCPTGRLFEPNSASVTYIRPDYLLAEGVMDVARTMHATLLRNA"
BASE COUNT          406 a          693 c          755 g          419 t
ORIGIN      
        1 cgccgtgacc gatggacagc cgcgcgtgct gacgatcgag cgcgccgaag ccctgccgtc
       61 cggcccgttc gaggccggcc atcgctcact gcaggccgga ctgcgatcat gggtggagac
      121 gcaaacccat catccgctgg gctatgtcga gcaactctac accttcgccg accaggaccg
      181 gaagcaaggg acgcttggtc gtgtggtttc ggtcagctat ctgggcctga cacgggaagc
      241 cccggtgatg gccggctggg atgccgcctg gcagccctgg tatcggtttt tcccatggga
      301 agattttcgt gggcccggcg ccgcgctggg ggaatcgatc ctggcaccgc cgctgtacga
      361 ctgggcggac agtgccaccg atccggcgac ccagcgggtg cggcggcacc ggatcacgct
      421 caattttggg ctgcgcggcc agcgctggaa cgaggaactg gttctgcaac gttacgaatt
      481 gctatgggaa gccggcctgg tcgccgaagg ccggcaatcc acgctccatc cggccgcgcc
      541 gccgctgtcc gaaaccctga ccgaggccct gggcgagccg atgcgccacg accaccgccg
      601 catccttgcc accggcatcg ctcggttgcg tgccaagatc aaataccggc cggtggtgtt
      661 cgaattgatg ccgcccgagt tcacattgtt acaattgcag cgaacggttg aggcgctggc
      721 cggccgtctg ttgcacaagc agaatttccg ccggctgatc gatcagcagg atttggtgga
      781 ggagacaggc gaagtaacga ccgggacagg cggccgccca gccaagctgt tccgcttccg
      841 gcgcgaggta ttggccgagc gacaggtggc cggtacgaaa ttgccgttgg tacgggcggt
      901 ctgacggccg tctcgccggt cagcgaaaat atttgacagc ggacggtcat gtggtggagc
      961 gtccggccaa gcaagactga gaggaaacgc caatgggaac ccccgcgaca cgtgccgtgt
     1021 tgggctttat cgccgcggcg atttcggtgc tgaccttcca tcaggcgatg tgggaggcgt
     1081 tgcatgtgct gaacctgccc ggcctgggaa tgccgccggc ctatccgaca cgcccggtcc
     1141 cgccgttcgg tgtgcccctc attctcgatt tgtgtttctg gggcggcctc tacgggatcg
     1201 tcttcggatt gctcgtgccg cggatgacgg cgccactgtg gctatgcggc ctggtcctgg
     1261 gaatcatcgc cgcactggtc ggcctgctgg tggtgccggc gatcaagggg ctaccgatcg
     1321 gcgccgggtg ggtgccgttg aactggctgc ggtcgctgtt gatcaatggg ttctggggca
     1381 tcggcgtcgg gatcatcctg ccgctgatat tgcggcggca accgcggctg gcgtgaccgg
     1441 ggacggcccc aatctaagca ttgcgtagca gcgtggcatg catggttcgc gccacgtcca
     1501 tgacgccttc ggccagcagg taatccggcc tgatgtaggt gacgctcgca ctgttcggct
     1561 caaacaggcg gccagttgga catggcggca tcagagccgt tcgatagcgc ttcacaatgt
     1621 cgtcgtgcag cagcgccagg gccggcgcgc cgtcgtcgat gggcaatgtg ttgaccacga
     1681 actgcatcga tttctcgacg atccagcgca ccggcaggtc agccttcgcc gcgagatatt
     1741 tttcgtgcaa caacggaaag ccttcccgga attgggtcca tcccaaggta ttcagcgtgc
     1801 ggatcatctc gctatcgacc atatcgagcg acacgttcac tcggcccaga tcggttggcg
     1861 gcgggtcggg ccaggacaga aatccacggc agaaatgggt cagcaggtcc tcacccgcct
     1921 ccaacacgct gttgtaggag acgagcctga tcgaatcctg cccgaacacc gcggcaaaac
     1981 ggtccaggat gtggcggaaa tcgacgatcg gagagtttgt cggattgccc aggcacgcca
     2041 gcacatattc cggcaatgtg ctcaatgacc cgtgtttgac ggactcgcgc cagcacgagg
     2101 ggatcagttc ggaccaccgc cggcaataga acaccacggt cgcgggttgc ccggccatta
     2161 gcgcgtgcag gcggcgaacc tccgcatcgg tcgcataggt gaagtcttcg gacgagagca
     2221 ggacggtgtc cgcaccggag cggttgaact gctggaatga agctggcaac ccg
//
LOCUS       DATAVD010001107         3313 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2528242, whole genome shotgun sequence.
ACCESSION   DATAVD010001107 DATAVD010000000
VERSION     DATAVD010001107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3313
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2528242"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..312
                     /locus_tag="VHX39_21100"
                     /pseudo
     CDS             1..312
                     /locus_tag="VHX39_21100"
                     /inference="COORDINATES: protein motif:HMM:NF037627.4"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
     gene            337..597
                     /locus_tag="VHX39_21105"
     CDS             337..597
                     /locus_tag="VHX39_21105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993676.1"
                     /translation="MIGSVSALSQTLVSDVSPLAEVASWQPPTGIVNLTSRGRVWAEG
                     GDVGHHHAAIRAHVSSRQTLKAVAREIRNRPVSPALLNYALL"
     gene            632..1024
                     /locus_tag="VHX39_21110"
     CDS             632..1024
                     /locus_tag="VHX39_21110"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX3993677.1"
                     /translation="MADGTIEIITGRERRRRWSTEEKLRIVAEAEEPGARMTDVAARN
                     EVYPSLLFNWRRQVREGKLGADNAARFVPVRLIEPPHDTPLPVRRPVSDRSSAAGIEI
                     SLPDGTRIYIRREAQLPLLRPVIEALRR"
     gene            1021..1368
                     /gene="tnpB"
                     /locus_tag="VHX39_21115"
     CDS             1021..1368
                     /gene="tnpB"
                     /locus_tag="VHX39_21115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017183759.1"
                     /note="TnpB, as the term is used for proteins encoded by
                     IS66 family insertion elements, is considered an accessory
                     protein, since TnpC, encoded by a neighboring gene, is a
                     DDE family transposase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HEX3993678.1"
                     /translation="MIAPPPNVRVWLACGHSDMRRGFDGLSAQVQQQLGLNPFDGQIF
                     VFRGRRGDLIKILCWDGQGLCLFSKRLEKGRFIWPQAKDGTVSLTAAQLSMLLEGIDW
                     RMPARTWQPEMVG"
     gene            1433..3112
                     /locus_tag="VHX39_21120"
     CDS             1433..3112
                     /locus_tag="VHX39_21120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000099160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HEX3993679.1"
                     /translation="MPTPLDLATLPRGAPALRRLLLQREAEHAAELQGQTAEREQQAD
                     ELQAARTELQTTRGELQAARNGLQELTLIHEKLKLRLARLLRQQYGTSSEKLRTAIDQ
                     LELLLEDVEEQIAAITPPEPQQPAVAPSAKPERHKPARRPLPESLPRDVVEHPAPCAC
                     PKCGGTLHALGEDVTEVLDYVPATFRVIRHVRPKLSCRTCESIAQAPVPSLPIQRGLA
                     TPALLAHVLVAKYADHLPLYRQTEIYGRAGVALDRSTLADWVGQSAQLLRPLVDAVGA
                     HVMTAERVHADDTTVPVLDPGRGTTKTGRLWCYVHDDRPFGGTAAPAVLYHYSPDRKG
                     EHPRAHLASFRGILQADGYAGYAGLYERGVTEAACMAHCRRKFFDVLAATDSPLALEA
                     LQRIAALYAIEAEIRGEPPDVRLAVRQARSTPLFTGLKGWLETTQTRISGKSELAGAI
                     RYVLARWDALTLIVRDGRVCIDNNAAERAMRPMTLGRKNWLHMGSDAGGERAAAIYSL
                     TETAKLNGLDPEDYLRQVLERIAEHPVKRVHELLPWNLANVRARLDQRDAA"
BASE COUNT          630 a         1043 c         1057 g          583 t
ORIGIN      
        1 ctcttccttg atccgcgcgt ccgcgctgcc caggatgatt gggaaagcgt ggcacgttac
       61 gtggtgggcg cattcaaggt aggcacggca cgtgccggag cggcagcggc ggtggaacct
      121 ctcgtcgatg aactctgccg gctcagcccc gcgttcaaaa cgatgtgaca cgacaacgac
      181 gtccgcagcc ctggcgaggg cgtcaagcac atacgacacc cggttctcgg cccgctcacg
      241 ttcgaagagt cggcattcgc agtcgatggc cggccggatc tcagcctgct ggtctatcat
      301 ccagcgacca cgacggatgc ggacaagatc cgctcgatga tcggttcggt atccgcgctc
      361 agccagactc tggtgagtga cgtgtcgccg ctggcagagg tggccagctg gcagccgccc
      421 accggcattg tcaacttaac cagccgtggt cgcgtttggg cggaaggcgg tgatgttgga
      481 catcatcatg ccgccatccg ggcacacgtc tcctctcgcc agaccctgaa agccgtggcc
      541 cgtgagatcc gtaaccgtcc ggtcagcccc gccttgctga actacgcctt gctatgacct
      601 taaagaggtg tttaaggcgg ggttaaggtc gatggcggac ggaacgatcg agatcatcac
      661 aggtcgggag cgtcggcggc gctggagcac ggaagagaag ctgcgcatcg tcgccgaggc
      721 agaggaacct ggcgcccgga tgacagatgt cgcagctcgg aacgaggtct atccgagcct
      781 gctgttcaat tggcgccgtc aggtacgcga gggtaaactt ggcgcggaca acgcggcgag
      841 gtttgtgcca gtacggttga tcgagccccc gcacgacacg ccgttaccgg tccggcgtcc
      901 tgtctcggac aggagcagcg ccgccggcat cgaaatcagt ctaccggacg gcacccgcat
      961 ttatataaga cgcgaagcgc agctgccgct gctgcgtcct gtgatcgagg cgctgcgcag
     1021 atgatcgcac caccaccaaa tgtgcgcgtg tggctggcat gtggtcactc cgacatgcgc
     1081 cgcggctttg atggtttgtc agcccaggtg cagcagcagc ttggtttgaa tccattcgat
     1141 gggcagattt ttgttttccg cggccgtcgt ggtgacttaa tcaagatcct atgctgggac
     1201 gggcaaggtt tgtgtctgtt cagcaagcgc cttgaaaaag gtcggttcat ctggccgcag
     1261 gcaaaagatg gaacggtgtc gctgaccgcc gcacaattat cgatgctgtt ggaaggtatt
     1321 gactggcgca tgccggcacg aacctggcag ccggagatgg tgggctgaaa aatcgacgct
     1381 gacaccgaga aagtacttga tccgacgcga atccatgatg gaagattcgg ccatgccaac
     1441 accgctcgac cttgcaacat tgccgcgtgg cgcccctgcc ttgcgccgcc tgctgctgca
     1501 acgcgaggca gagcatgccg ccgaattgca agggcaaacc gcagagcggg aacaacaggc
     1561 tgatgagttg caagccgcgc gcactgaact gcagacgaca cgcggcgaat tgcaggcggc
     1621 acgcaacgga ctgcaagagc tgacgctgat ccatgaaaag ctgaagctgc gcctggctcg
     1681 gttgctgcgc cagcagtacg gcacatcgtc agagaagctg cgcaccgcga tcgaccagtt
     1741 ggagttgctg cttgaggacg tcgaggagca gatcgccgca atcacgccgc ccgagccgca
     1801 acagcccgct gtggcaccct ccgcgaaacc ggaacggcac aagccggctc gcaggccgct
     1861 gcccgagagc ctgccacgcg acgtggtaga gcatccggcc ccctgcgcct gccccaagtg
     1921 cggcggcacg ctgcatgccc tcggtgagga cgtcaccgaa gtcctggact acgtgccggc
     1981 aacgttccgc gtcatccgcc atgtgcgccc gaagctatcg tgccggacct gcgagagcat
     2041 tgctcaggcc ccggttccca gcctgccgat ccagcgcggt ctagccacac ccgccttgct
     2101 ggcgcatgtg ctggtggcga aatacgccga ccaccttccc ttgtatcggc aaaccgagat
     2161 ctatggccgc gccggcgtcg ccctggatcg ctccaccctg gccgattggg ttggccagag
     2221 cgcgcagctg ctgcgtccgc tggtggatgc ggtcggcgcc catgtcatga cggcggagcg
     2281 ggtgcatgcc gatgacacca cggtgccggt actcgacccc ggccgcggca ccaccaaaac
     2341 cgggcggctg tggtgctatg tgcacgatga tcgcccgttc ggcggcaccg cggcaccggc
     2401 cgtgctctat cactacagtc cggatcgcaa aggcgagcat ccacgggcac acctcgcctc
     2461 gttccgcggc atcctccagg cagacggata tgcgggctac gccgggctgt atgagcgcgg
     2521 cgtcaccgaa gcggcctgta tggctcattg ccggagaaag ttcttcgacg tgctcgccgc
     2581 caccgactcg ccgctggcac tggaggcgct gcaacgcatc gccgcgctgt atgccatcga
     2641 ggctgaaatc cgtggcgagc cgcccgatgt ccgcctggcg gtccgacagg cgcgaagcac
     2701 gccgttgttc accggcttga agggctggct ggagacgacc cagacccgga tctcgggcaa
     2761 gagcgagctg gctggcgcga tccgctacgt gctggcacgc tgggatgctc tgaccctgat
     2821 cgtgcgtgac ggccgcgttt gcatcgacaa caacgccgcc gaacgcgcga tgcggccgat
     2881 gaccctgggg cgcaaaaact ggctgcacat gggatcggac gccggcggtg aacgggcggc
     2941 ggcaatctac tcgctcaccg agaccgcaaa gctcaacggc ctcgatcccg aagactatct
     3001 gcgccaggtg ctggaacgga tcgctgagca tccagtcaaa cgggtccatg aactactgcc
     3061 gtggaacctc gccaatgtcc gtgcgaggtt ggatcagcgc gacgctgcct gagcgcaacc
     3121 ctagccagtc atcatatcgg gccgccaggc ggggctgacc ggacggttac tgattagcag
     3181 ccggacaggt tgactcctat gccgctcgat ctgtcgcctt gtcataattg ggcgttatgc
     3241 ggcatttgaa ccgcaggagt gattatcgtc tagtgacaaa tattccgcgc gtgactatgc
     3301 cgcctttgac ctc
//
LOCUS       DATAVD010001108         2755 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_666943, whole genome shotgun sequence.
ACCESSION   DATAVD010001108 DATAVD010000000
VERSION     DATAVD010001108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2755
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_666943"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1658
                     /locus_tag="VHX39_21125"
     CDS             <1..1658
                     /locus_tag="VHX39_21125"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3993680.1"
                     /translation="VFAVGDGAAVGGARVAAARGRLAGLAAARDLGHAAPEDRATRQA
                     LRRGLAFQDALWRVFPLPPVDPDSISDATIVCRCEEVTAGALRAELAAGLHSLAALKK
                     ATRAGMGRCQGRFCAATVARLCPGVSEPDGFAAPRAPVRPVPAAPLMAEAPEFKAPLL
                     EDLTPPSRDAGGPDERFSVQIAVIGGGIAGLCTAYYLAQGGADVMVVERGEVGMAAST
                     ANAGSLHVQLLSYDFTDDTPQDGGPAGHTLPLAPRSIALWKEIGAAVGESLGIRTEGG
                     LMLAEDAAGMEWLRRKSAMERRWGIESHVFGANELASIAPALSDRMVGADFVPAEGYG
                     DPLRGTLAVRTLALRHGARILAGAEVHAIERDGPGWIIATSRGRIEAGSVVNATGPWA
                     ARTGRMVGLNLPVTGTVQQVIVTEPAPVLTRHLIAVANRHLSLKQQASGGFLVGGGWF
                     GGFDKATGRTHALQQSIAGNLWVCGRVLPALHGLTMIRSWTGINPAIDRAPILGEAPG
                     LPGFYNTVTANGYTLGPIVGRLTAEAILHGEPIDPHYRVERFG"
     gene            complement(1691..2494)
                     /locus_tag="VHX39_21130"
     CDS             complement(1691..2494)
                     /locus_tag="VHX39_21130"
                     /inference="COORDINATES: protein motif:HMM:NF018038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThuA domain-containing protein"
                     /protein_id="HEX3993681.1"
                     /translation="MPEQKPGRAHLIAGGYPPGQSAGHDHDYARLKLLELLAEQNVPA
                     SVANDFADVEKWLPTSRLLITYVAGPYPDAAQSRAIQHWLEAGGYWLGLHGTSGGRAE
                     RVEGVRQRRTVRTEHHAILGSRFLTHPPLCPFRVDVNEHPLTQGLGASFDIEDEPYFI
                     ELQDPAATRILLTADYGPGAVSPAIGTVYASDTSLQPDGRTRVLGYLREVGSGGVIYF
                     AFGHCHNPASRAGRAADATDTTPATFHGPWENPAFTTLLRNAIAWRGGA"
     gene            complement(2525..>2755)
                     /locus_tag="VHX39_21135"
     CDS             complement(2525..>2755)
                     /locus_tag="VHX39_21135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993682.1"
                     /translation="ADIVVLDPADKRVITAAELHEADYTPWEGRKMEAWPCLTVLRGK
                     VVVENGAFKGSLNDGKWQHRKIADEMFTGARL"
BASE COUNT          456 a          836 c          927 g          536 t
ORIGIN      
        1 ctgtgttcgc tgttggggat ggcgcggctg ttggtggcgc acgggtcgcc gcggctcggg
       61 gtcgattggc tggcctggca gcggcacgcg atcttggcca tgcggcgccg gaggaccgtg
      121 caacacgcca ggcgctgcgt cgaggcctgg cgtttcagga tgcgctctgg cgggtatttc
      181 cattgccacc ggtcgatccc gactcaattt ccgatgcaac gatcgtgtgc cggtgcgagg
      241 aagtcacggc aggtgcgctg cgtgccgagc ttgcagcggg tttgcattcc ctggcggcgt
      301 tgaagaaagc gacccgagcc ggcatggggc gatgccaggg ccggttttgc gcggccactg
      361 tcgctcggtt gtgtccgggc gtgtctgagc cggatggttt cgctgcgccg cgcgccccgg
      421 tgcggcccgt gccggctgcg ccgctgatgg cggaagcgcc ggaattcaaa gctccgttgc
      481 tggaggatct gacgccccca tcgcgcgatg ccggcggccc ggatgaacgg ttcagcgtgc
      541 aaattgcagt cattggtggc gggatcgccg gcttgtgcac agcgtattat ttggcccagg
      601 gtggcgctga tgtaatggtg gtggaacgag gcgaagtggg aatggcggcc agcacagcga
      661 acgccggcag cttgcatgta caactgctgt cctacgactt caccgacgat acgccccagg
      721 atggcggtcc cgctgggcat accttgccgc tggcgccgcg cagtatcgca ttgtggaaag
      781 agatcggcgc cgcggtagga gaatctctcg gtattcgcac agagggcgga ctgatgctgg
      841 ccgaggacgc ggccgggatg gagtggctgc gtcgcaaatc cgccatggaa cggcgctggg
      901 ggatcgagag ccacgtattt ggcgccaacg aactggcttc cattgccccg gctttgtcgg
      961 atcgcatggt gggcgccgat ttcgttcctg ccgagggcta tggcgatccg ttgcgcggca
     1021 ctctggctgt gcgaactctg gcgctgcgcc acggcgcccg cattctggcc ggcgcagagg
     1081 tgcatgcgat cgaacgagac gggcccggat ggatcattgc cacctcacga ggccgtattg
     1141 aggctggctc ggtcgtcaat gccaccggtc catgggcggc acgaaccgga cgtatggtag
     1201 gactgaattt gccggtcacc ggaaccgtgc agcaggtgat tgtgacggag ccggctcctg
     1261 tgctgacgcg tcatttgatt gcggtggcga accggcattt atcgctgaag caacaggcca
     1321 gcggcgggtt cctggtgggt ggcggttggt ttggcgggtt cgacaaagca accggccgga
     1381 ctcatgcgct gcaacaaagt atcgccggca atttatgggt ctgtggccgc gtgctgcctg
     1441 cgttgcacgg tctgacaatg atacgcagct ggaccggcat caatccggcc atcgaccgcg
     1501 cgccaattct tggcgaggcg cctggcttgc cagggttcta caacaccgtc accgcgaatg
     1561 gttatactct cggaccgatc gtcggccgcc tgacggccga ggcgattttg catggtgagc
     1621 cgatcgaccc gcattatcgg gtagaacgtt tcggttagca ccggacccgc tccaccaccg
     1681 ctgttattgg ttacgcgccg ccgcgccagg cgatcgcatt tcgcagcagc gtcgtaaacg
     1741 ctggattttc ccaagggccg tggaatgtgg ccggcgtggt gtccgtcgca tcggccgcac
     1801 ggcctgcacg gctggccgga ttgtggcagt ggccgaaggc aaagtagatc acgcccccac
     1861 tgccaacctc ccgcagatag ccaagcacac gggtccgccc gtcgggctgc agcgacgtat
     1921 ccgaggcgta gaccgtccca atggcaggcg acactgcgcc tgggccataa tcggcagtca
     1981 gcaaaattcg tgttgcggcg ggatcctgca gctcgatgaa gtatggctcg tcctcgatgt
     2041 cgaacgacgc gccaagtcct tgggtaagcg ggtgctcgtt gacgtcgacg cgaaacgggc
     2101 agagcggcgg atgggtcaga aagcggctgc ccagaatcgc gtgatgctcg gtccggaccg
     2161 tgcgtcgttg ccgcacgcct tccacccgtt cggcacggcc accgctggtg ccgtgcaagc
     2221 ccagccaata cccgcctgcc tcaagccagt gctggatcgc gcggctctgc gcggcgtccg
     2281 ggtaagggcc agccacgtac gtgatcagca accgggacgt cggcagccat ttctccacat
     2341 cggcaaaatc gtttgccacc gaggcgggga cattttgttc ggccaacagc tccagcagct
     2401 tcaaccgtgc ataatcgtgg tcgtggccgg cactttggcc gggcggatag ccgccggcga
     2461 tcagatgggc gcggccgggt ttttgttcgg gcatcggatt acctcattcg cgatttggcg
     2521 tcagtcacag tcgcgcgccg gtgaacattt catcggcaat ttttcgatgt tgccacttgc
     2581 cgtcattcag gctgcccttg aacgcgccgt tctcgacgac aaccttgccg cgcagcacag
     2641 tcaaacaggg ccacgcctcc attttgcggc cttcccaggg cgtataatcc gcctcgtgca
     2701 attccgctgc cgtaatgacc cgcttatcgg ccggatcgag caccacgatg tccgc
//
LOCUS       DATAVD010001109         2992 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2898752, whole genome shotgun sequence.
ACCESSION   DATAVD010001109 DATAVD010000000
VERSION     DATAVD010001109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2992
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2898752"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(79..531)
                     /locus_tag="VHX39_21140"
     CDS             complement(79..531)
                     /locus_tag="VHX39_21140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEX3993683.1"
                     /translation="MGFSPGTETLLTHAGEICEAKGARLTDLRREVLGLILESDAPTG
                     AYDLLDRLRATRHGAAPPTVYRALEFLLEHGLIHKLESRSSYVGCVSHGDSDHAAQFL
                     ICRTCGQVTELDDHELAHALEDAARRLGFTVGKATIEAEGRCASCARR"
     gene            570..989
                     /gene="hisI"
                     /locus_tag="VHX39_21145"
     CDS             570..989
                     /gene="hisI"
                     /locus_tag="VHX39_21145"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006559819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HEX3993684.1"
                     /translation="MSEDATTAVTPVSIATVLDAVCFDANGLVPAIAQQHDTGEVLMM
                     AWMNRDAVAETLTTGRVCYWSRSRGQLWRKGETSQQIQYLKEFRLDCDGDTILLLVEQ
                     EGVACHTGRRACFYRAVRDGALVEIARPLIDPKKLYG"
     gene            982..1971
                     /locus_tag="VHX39_21150"
     CDS             982..1971
                     /locus_tag="VHX39_21150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX3993685.1"
                     /translation="MAEMTPVTVLTGCLGAGKTTVLNHLLRQPELARTAVLVNEFGEI
                     GIDHLLVEKLDENTVLLNAGCLCCTVRGDLTRVLREMLPRARRDEISRVIIETTGLAE
                     PAPVLATLMTDPVVASAYRLDGVVTVIDAVGGLANLAERPEAMRQIAMADRIVLTKTD
                     LADPASLLQRIDALNPGAPVITAPHGAIDPATILHAGLFNPATKIPDVAGWLHAEAQA
                     HHHHEHDERITSFCLTFDRPLHWQGFGMWLELLIQTRGKDLLRIKGILNLQGQDRPVA
                     IHAVQHVLHPPALLSGWPEGDPQTSRIVFITQDLPRSVIEEGARAFEAAADHR"
     gene            complement(1997..>2992)
                     /locus_tag="VHX39_21155"
     CDS             complement(1997..>2992)
                     /locus_tag="VHX39_21155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993686.1"
                     /translation="YYDEDRITSATDFYANTFGTFLGGLASLAFGASFRLPFVGAIVA
                     RPIPAMLVCAWLSYRLYPYVPTIDLHKYWRALKPVVLTPSLSPYDVFCQTAVFVSLYA
                     LIEAVVRQRRSPYVGLLFAIGVMVALILIVDAELRLAELAGATVALVIWLILLRLPVR
                     GQMGAAGMVLCAYVIALRLEPFQFRPGGHAFGWVPFLGIMQGSLAVETLSFLEKFFLY
                     GSLLYLLTRSFGRRLPVTIFLAALLFATNWAETWLPDRSAEITDALMVLLIGSIFALM
                     PPESEMRPSAMQPQGSTGDPVALPRGDDVPHPGWRERAAARRAARRNATGEIEHY"
BASE COUNT          620 a          938 c          918 g          516 t
ORIGIN      
        1 caaccatccc cgtgcgcaac tcgcagcact acccccgtgc acaacttgcc gcactacccc
       61 cgtgcgcaac ttgccgcact acctccgtgc gcaacttgcg caacgtccct ccgcctcgat
      121 cgtcgccttg ccaacggtaa agcccagtcg acgagcggcg tcctcgagcg catgggcgag
      181 ttcgtggtcg tcgagttcgg tcacctggcc gcaggtccgg catatgagaa actgcgccgc
      241 gtggtcacta tcgccgtggc tgacgcagcc gacataggac gaacgactct ccagtttatg
      301 gatcagccca tgttccagca ggaattcaag cgcccgatac accgtcggag gtgccgcgcc
      361 atgacgggtc gcgcgtaacc tgtccagcag gtcataggca ccggtcgggg catccgactc
      421 cagtatcagc cccaggactt cgcgccgcag gtcggtgagg cgagcgcctt tcgcctcgca
      481 gatctcgccc gcgtgtgtca gcaatgtctc ggtcccgggg gaaaacccca tatggcgctc
      541 cgtagcccaa tcggcgcaga atagcattca tgagcgaaga tgccaccacc gctgtaacgc
      601 ccgtctcgat cgccaccgtg ctggatgcag tgtgtttcga tgccaatggc ctcgtgccgg
      661 cgatcgcgca gcagcacgac accggcgagg tcctgatgat ggcctggatg aaccgcgacg
      721 ccgtggccga aacgttgacc acgggccgcg tctgttattg gtcgcgcagc cgtggccagc
      781 tgtggcgcaa aggcgagacc tcgcagcaaa tccagtacct gaaggaattc cgcctcgatt
      841 gcgacggtga cacgatcctg ctgttggtgg agcaggaggg cgtggcctgt cacaccggcc
      901 gccgcgcctg tttctatcgc gcggtacgag acggcgcgct ggtggagatc gcccgaccgc
      961 tgatcgaccc gaaaaaactc tatggctgag atgaccccgg tcaccgtgct gaccggctgc
     1021 cttggtgccg gcaagaccac cgtgctgaac catttgctgc ggcagccgga actggcgcgc
     1081 accgccgtgc tggtgaatga gtttggtgag atcggcatcg atcatctgct ggtcgaaaaa
     1141 ctcgacgaaa acacggtgct gctgaacgcc ggttgcctgt gctgcacggt gcgcggcgat
     1201 ctgacccggg tgctgcgcga gatgctgccg cgcgcccgtc gcgacgagat cagtcgcgta
     1261 atcatagaaa ccactgggct tgccgaaccg gcgccggtcc tggccacgtt gatgaccgac
     1321 ccggtggtcg ccagcgccta tcggctcgac ggcgtggtga cggtgatcga tgctgtcggc
     1381 ggcctggcca atctcgctga acggccggag gcgatgcggc agatcgccat ggccgaccgg
     1441 attgtgctga cgaagacgga ccttgccgat ccggcgtcat tgctgcaacg catcgatgcg
     1501 ctgaatcccg gcgcgccagt cattacggcg ccgcacggcg cgatcgatcc ggcaacgatc
     1561 ctgcatgccg gcctgttcaa tccggcaacg aaaatcccgg acgtcgccgg ttggttgcat
     1621 gccgaagcgc aggcgcatca tcaccacgag catgacgaac ggatcacctc cttctgcctg
     1681 accttcgacc gtcccctgca ttggcaaggg ttcggcatgt ggctggaatt gctgatccag
     1741 acacgcggca aggatttgtt acgcattaag ggtattctga acctgcaagg ccaggaccgc
     1801 ccagttgcca tccatgcagt gcaacacgtg ttgcatccgc cggccttgct gagtggctgg
     1861 cccgagggcg atccgcagac cagcaggatc gtgttcataa cccaggatct gccgcgttca
     1921 gtgatcgaag aaggcgcgcg cgcgttcgag gcggcggcgg atcatcgttg acaccacctc
     1981 gggattttct tgtcgttcaa tagtgctcga tttcaccggt ggcattgcgc cgggctgccc
     2041 ggcgagctgc cgcgcgttct cgccatcctg gatgtggcac gtcatcgcca cgcggtaacg
     2101 cgacggggtc gccggtcgaa ccttgcggct gcatagccga cggccgcatt tcggattcag
     2161 gtggcatcag cgcgaagatc gacccgatca acaggaccat gagcgcgtcg gtgatctcgg
     2221 cggaccgatc cggcagccag gtctcggccc agttggtcgc gaacaggagt gcggcgagga
     2281 agatcgttac gggcaggcgc cgaccaaacg aacgtgtcag caggtaaagc aagctgccgt
     2341 agaggaagaa cttctccagg aaagatagcg tctcgaccgc cagcgaacct tgcatgatac
     2401 cgaggaacgg aacccagcca aatgcgtggc cgcccggccg aaactgaaac ggttcaagcc
     2461 gcagcgcgat cacataggcg cacagtacca tacccgctgc tcccatttgc ccgcgcacgg
     2521 gaaggcgcag cagaatgagc cagatgacca atgcgacagt cgccccggcg agttccgcca
     2581 ggcgaagttc cgcatcgacg atcaatatca gggcgaccat cacgccaatg gcgaacagca
     2641 atccgacata aggtgaacgt cgctgccgta cgacggcttc gatcaacgca tagagggaaa
     2701 caaaaactgc ggtctgacaa aacacgtcgt acggggacaa cgacggcgtg aggacaacag
     2761 gctttagcgc tctccagtat ttgtgcagat cgatcgttgg tacataggga taaagccgat
     2821 acgagagcca tgcgcacacc aacatcgcag ggatcggcct ggcgacgatg gcgccaacga
     2881 acggcaaacg aaaactggcg ccgaacgcca gcgatgcgag accacccaga aaagtcccaa
     2941 atgtattggc atagaaatca gtcgccgagg tgatacggtc ttcgtcgtaa ta
//
LOCUS       DATAVD010001110         1808 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_478696, whole genome shotgun sequence.
ACCESSION   DATAVD010001110 DATAVD010000000
VERSION     DATAVD010001110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1808
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478696"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..483)
                     /locus_tag="VHX39_21160"
     CDS             complement(<1..483)
                     /locus_tag="VHX39_21160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX3993687.1"
                     /translation="MIDPYGRPITYLRVSVTDRCDLRCVYCMAEDMTFLPKRELLTLE
                     ELDRLSGAFIRLGTSKIRITGGEPLVRRDIVRLFQSLGSRLGHGLNELTVTTNGTQLA
                     KHAEGLYAAGVRRINVSLDSLDPARFTQLTRWGKIEQTLDGIFAAKAAGLAIKINAVA
                     M"
     gene            656..1285
                     /locus_tag="VHX39_21165"
     CDS             656..1285
                     /locus_tag="VHX39_21165"
                     /inference="COORDINATES: protein motif:HMM:NF021595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphotransferase family protein"
                     /protein_id="HEX3993688.1"
                     /translation="MAQSSDTIRLVELICARLCHDLGGLIGTVANALDMVTEDAGRDN
                     EVLAFASSAAHALTQRLRLMRTAWGPESDAITLPALVKLVSQTLAARRVRLDTDRLQA
                     DCEFASPVARVVLNLIVLACDCLPRGGAIVLLGEPADLLVRIVGQGAAWPQGFTECMR
                     DESAALAALTNALSVQMPLTALFAQSGGLRLSPVLGPASGIEALRLSPG"
     gene            1459..>1808
                     /locus_tag="VHX39_21170"
     CDS             1459..>1808
                     /locus_tag="VHX39_21170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HEX3993689.1"
                     /translation="MDDLLADFLTETNENLAELDVALLALERTPDDAATLGLIFRMVH
                     TIKGTCGFLGLPRLERVAHAGENILGQLRDGTLSASPDMVSQILAALDRIKAILADLS
                     KSGAEPAGDDSALI"
BASE COUNT          330 a          521 c          575 g          382 t
ORIGIN      
        1 catcgccact gcgttgattt tgattgcgag accggctgcc ttcgccgcga aaataccatc
       61 cagggtttgt tcgatttttc cccagcgggt cagttgcgta aaccgggcgg gatcgagact
      121 gtccagcgac acgttgatcc ggcgcacgcc cgcggcatac agcccctcgg cgtgcttcgc
      181 gagttgggtg ccgttggtgg tgacggtcag ttcattcagc ccatgaccca ggcgcgagcc
      241 cagggattgg aacagtcgga cgatgtcgcg gcgaaccagc ggctcaccgc cggtaatgcg
      301 gattttcgac gtgcccagtc gaatgaatgc accggagagc cgatcgagtt cctccagcgt
      361 cagcaattcg cgcttcggca ggaaggtcat gtcctcggcc atgcagtaaa cacagcgcag
      421 gtcacagcgg tcggtcacgg aaacccgcag gtaggtgatg gggcggccgt acgggtcaat
      481 catgttatgt taatactccc tctcatatcg cttaagcaat cccatcaggc gatacacagg
      541 atgccttggc gatgccgctc ggggcgatgg tgcctttcac ggcttgcttc atcatgtaaa
      601 gtggtgtgga ccgtcgcaat gcaaaggtct tccgacaaca ggggcaggta cgcgaatggc
      661 gcaatcgagc gataccatac gcctcgtcga actgatttgt gcccgtcttt gccatgatct
      721 cggtggactg atcggcaccg ttgccaacgc gctcgacatg gtgaccgagg atgcaggcag
      781 ggataacgag gtcctcgcgt ttgcttcatc cgcggcgcat gcgttgactc aacgattgag
      841 gctgatgcgc acggcctggg ggccggaaag tgacgcgatc accttgcccg ctttggtcaa
      901 gttggtcagc cagacgctgg cagctcgtcg cgtcaggctc gacaccgata ggctccaggc
      961 ggactgcgag tttgcgtcgc cggtcgcccg ggtggtgctg aacctgatcg tgcttgcctg
     1021 cgactgcttg ccgaggggtg gcgcaatagt tttgcttggt gagccggctg atctgctggt
     1081 ccggatcgtt ggccaaggtg ccgcctggcc gcaaggattt accgagtgca tgcgggacga
     1141 gtccgccgcg cttgcggctc tcaccaatgc tctgtctgtg cagatgccgt taacggcatt
     1201 gtttgcgcaa agtggcgggc tgcggctgtc gccggttctg ggacctgcgt ccgggatcga
     1261 agcattgcgg ttaagcccag gttaacgcgc tgcttttctg cagctgcctg gaggcgggcc
     1321 gggtcacagg ccggtaaatg accgcacccg tgtgtcggcg aaaataaatt ccggaaccgc
     1381 ccggaggttt acactttatt cgtgatctcg gttcactact cggccccaac agacagctta
     1441 accgccgcgg gggccgcaat ggatgactta ctggccgatt ttctaaccga aaccaacgag
     1501 aacctggctg aactcgacgt cgccctactg gcgttggagc gtacgccgga cgacgcagcg
     1561 accctcggcc tgattttccg catggtacac acgatcaagg gtacatgcgg gtttctgggg
     1621 ttgcctcggc tggagcgggt cgctcacgcg ggcgagaaca tacttggcca gctccgcgac
     1681 ggcaccttgt ccgcctcgcc tgatatggtc agccagattc tggcggcgct ggatcgcatc
     1741 aaggcaatcc ttgcggatct gtcgaagtct ggagcggagc cggcgggtga tgacagtgcc
     1801 ttgatcga
//
LOCUS       DATAVD010001111         2543 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2154691, whole genome shotgun sequence.
ACCESSION   DATAVD010001111 DATAVD010000000
VERSION     DATAVD010001111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2543
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2154691"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VHX39_21175"
     CDS             <1..184
                     /locus_tag="VHX39_21175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993690.1"
                     /translation="LAGRHGTHFVATLTVAASAHPFFGPQDVAWCLPSEHASDIRHRT
                     AQPGFRYARDRGRIAR"
     gene            269..1234
                     /locus_tag="VHX39_21180"
     CDS             269..1234
                     /locus_tag="VHX39_21180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011258802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEX3993691.1"
                     /translation="MQRSFAEYDGFRKQRKVTRRQAFLAEMDRVVPWQRLEALIEPHY
                     PTAGNGRKPYPLSVMLRVHCLQHWYGYSDPGMEEALHDIPALRRFAGLDAGVSRLPDE
                     TTILNFRHLLEAHQLAESLFQDVVSLLTEQGLILREGTIVDATLIAAPPSTKNRERQR
                     DPEMTSSKKGNQWHFGLKAHIGVDTAHGLVHSVIVTTGKVSDYSLAQDLLHGDETTAH
                     GDRGYADKTREPDRLRTEDDVGPRWYVPFKRRKDCDTTPEQKRLNRTLSGLRSAVEHP
                     FRVLKRQFGHTKVRYRGLFKNEQQLFGQFAMVDLYLARRVLAPAG"
     gene            1490..2328
                     /locus_tag="VHX39_21185"
     CDS             join(1490..1877,1877..2328)
                     /locus_tag="VHX39_21185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612205.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEX3993692.1"
                     /translation="MWTDENRARYDRSKLRYPSDLTDQEWSLIEPLIPPAKRGGNRRT
                     VVVRDVVDGVMYILSTGCQWPALPKDLPPRSTVNDYFRRWDDDGTLDRIHHALYIQCR
                     ELAERAASPTAAIIDSQSVKSAEKGGSLSDPPGYDAGKKIKGKKRHVLVDTQGLLLHA
                     VVHAADIQDRDGGVLLMSTLFGLFPFLLKLYADSGYQGPKFKAGLQRVCSQINVEIVK
                     RSDAGTFVVLPKRWIVERTIAWLNRCRRLAKDWECLNRNGLAFLRWASVRLMVRKLCK
                     GNQ"
BASE COUNT          528 a          733 c          806 g          476 t
ORIGIN      
        1 gctggcagga cgccatggca cgcactttgt tgcgaccctg acggtcgccg cctcagctca
       61 tcctttcttc ggtccccagg acgtagcgtg gtgcctcccc agcgagcatg cgtcggatat
      121 tcgccaccgc acggcgcaac ccggtttccg ctacgccagg gacagaggca gaattgcgcg
      181 gtgagccgat gaccttaggg aaactctgaa taagtcctat gcgacgcggc gtcgaatatg
      241 attccctgct ctccggaggg ctcttcggat gcagcgcagt tttgccgaat atgacggttt
      301 tcggaagcag cggaaagtca cgcgccggca agcgtttttg gccgagatgg atcgcgtggt
      361 gccctggcaa cggctcgagg cgctgatcga accgcactat cccaccgccg ggaacggccg
      421 caagccctat ccgttgagcg tcatgctgcg ggttcactgt ttacaacatt ggtatgggta
      481 ttcggacccc gggatggagg aagcactgca cgacattccc gctctacggc gcttcgcggg
      541 cctggacgcc ggtgtgagcc gtctgccgga cgaaaccacg atcctgaact tccgtcattt
      601 gctggaagcg caccaactgg ccgagagcct gtttcaggat gttgtctcgc tgttgaccga
      661 gcagggcttg attctgcgcg aaggcacgat cgtggacgcg accctgatcg ccgcaccgcc
      721 gtcgacgaag aaccgcgagc gccagcgcga cccggagatg acgtcgagca agaagggcaa
      781 ccaatggcat ttcggactga aggcgcatat cggcgtggat acggcgcatg gcctggtgca
      841 ttcagtgatt gtcacgaccg gcaaggtgtc ggactacagc ctggcgcagg acctgctgca
      901 cggcgatgaa acgacggcac acggcgaccg cggctatgcc gacaaaacgc gcgaacccga
      961 tcgcctgcgc acggaggacg atgtcggtcc tcgctggtat gtgccgttca aacgccggaa
     1021 agactgcgac acgacgccgg agcagaagcg cctgaatcgg acattgtcgg gcctgcgttc
     1081 ggcggtcgag catccgttcc gggttctcaa gcgccagttc ggtcatacga aggtgcggta
     1141 tcgcgggttg ttcaagaacg agcagcagtt gttcggccag tttgccatgg tcgatttgta
     1201 tctggcgcgg cgcgtgttgg cccctgccgg ttgaaggcca ggggcggaat ctgtccggcg
     1261 cctggaaaaa gggcaccgga gaccaccgaa catctgaaaa tcgaagccat aggcgatgcc
     1321 aggcccgcca gaagcggccg gaggcacacg agattagggc aaccatacaa tcggtgccga
     1381 aaaatcggtc tgttcagagg ttccctaagt gtccatccgg gaacatattg agtctttgga
     1441 atcgcttatg ttttaatccc tgtcgaaccg attcgcagga agcgacacga tgtggacaga
     1501 tgaaaaccgc gcccggtacg accgcagcaa gctgcgctac ccgagcgatc tgaccgacca
     1561 ggaatggtcg ctgatcgaac ccttaatccc gcctgcgaag cgcggcggca accgccggac
     1621 ggtggtggtg cgggacgttg tggatggcgt catgtacatt ctctcgactg gctgccagtg
     1681 gccggcgctg ccgaaggacc tgccaccgcg cagcacggtc aacgattact tccgtcgctg
     1741 ggatgacgac ggcacgctcg atcgcatcca ccacgcgctt tacatccaat gccgggaact
     1801 ggccgaacgg gcggccagtc cgaccgccgc gatcattgac agccaaagcg tgaagagcgc
     1861 cgaaaaaggg gggtcttgag tgatccgccc ggctatgatg ccggcaaaaa gatcaagggt
     1921 aagaagcggc atgtcctggt agatacgcaa ggtttgctgc tgcacgccgt ggttcatgcg
     1981 gccgatatac aggaccgcga cggtggcgtg ctgctgatga gcacgctatt tggtctgttt
     2041 cccttcctac tgaaactgta tgccgacagc ggctatcagg ggccgaagtt caaggccgga
     2101 ctgcagcggg tgtgcagcca gatcaacgtc gagatcgtca agcgttcgga cgccgggacg
     2161 ttcgtcgtgc tgcccaagcg atggatcgtc gaacgtacga ttgcctggct gaaccgttgc
     2221 cgacgattgg ccaaggactg ggaatgctta aatcgtaatg ggctcgcgtt tctgagatgg
     2281 gcgtcagttc ggctgatggt cagaaagctc tgtaaaggca atcaatgatc ccggatagac
     2341 tctaaggctg tttcaatcgt tttgccccgc cacagggatt gacccgcaca gcgcgcgatc
     2401 cgaccattgg agtccgtacc ggacaacgaa cacgacgtcc gtcggcaata atgggaggat
     2461 cgcatggtcg gcggaatgtt tcgcctggtc gcggcactgg tcatggccgg aaccagcgcg
     2521 gcagtggcgc agcaatacga ccc
//
LOCUS       DATAVD010001112         3672 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1781711, whole genome shotgun sequence.
ACCESSION   DATAVD010001112 DATAVD010000000
VERSION     DATAVD010001112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3672
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1781711"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VHX39_21190"
     CDS             complement(<1..262)
                     /locus_tag="VHX39_21190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993693.1"
                     /translation="MSASRPKAGWKVESQWDALRIAFRPYHSCIIIYARAGTRNQMDD
                     TLVDQQRERGDFNDKVGPELAATLPPRVIYLVHDAAPVVTRHS"
     gene            complement(937..1164)
                     /locus_tag="VHX39_21195"
     CDS             complement(937..1164)
                     /locus_tag="VHX39_21195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993694.1"
                     /translation="MPHLVPGRSGPAANLSLYLIFNYVSKFLYFGFQWKKLPIDKNDG
                     GKPEIHYTRINRIWRRWVGMGRADAISPGRY"
     gene            1452..3305
                     /locus_tag="VHX39_21200"
     CDS             1452..3305
                     /locus_tag="VHX39_21200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3993695.1"
                     /translation="MALWLLATPATSHAQSPAPPTPAPPAPAANAAPIRTYGLSLLGN
                     PALPSDFKSFEYVNPDAPKGGEIVLSSVGTFDSFNPFIVRGNAPIEMLRVWDTLLKPD
                     ADEAESEYGLLAKVIEIQADHMGVAFELNPEAKFNDGTPVTAQDVAWTFNTLREKGRP
                     FYRQYYADVASVSVESPTRVVFRFKSNTNRELALILGQMPVLPEHWWAGRDFDKPLTD
                     PPLGSGPYKVGHFEFGRTLSMVRVPDVWSKDLPVMRGLNNFDTYRTEFFRDSTVALEA
                     FKAGQIDLRDENIAKEWATAYDFPAVQKGLVKKALLPHHMPTGMQGFGMNTRRPIFQD
                     VRVRHALALAFDFEWANKNLFYGAYTRTQSYFSNSDLASSGIPEGAELALLDKYRDQL
                     SPDIFTKPFTLPVTDASGDNREELRAALSLLEQAGWKVKDRKLVNAEGKPFSFEILLS
                     QPAFERVALPYVQWLTKLGIDAHVRTVDPAQFQRLSDTYDFDMIVVDYDETESPGNEQ
                     TGYWTCSSAKLEGGNNLMGVCSPVIDDLVHQILTAPDRTHLVVATHALDRVLLNGWYV
                     VPQWYLRTVRVAYWDRFGRPAQPVRTGLELDSWWLDPAKAAATDEARRHGL"
     gene            3352..>3672
                     /locus_tag="VHX39_21205"
     CDS             3352..>3672
                     /locus_tag="VHX39_21205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462362.1"
                     /note="with YejAEF is involved in resistance to microcin
                     C; Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin ABC transporter permease"
                     /protein_id="HEX3993696.1"
                     /translation="MGAYLIRRLLLVIPTLFGIIAINFFVVQFAPGGPVEQMIAQLKG
                     HGGGAIGRMTGAGGTETMPIGNGTYRGARGLDPHTVADIKKMFGFDKPAPERFVLMLR
                     GYLTF"
BASE COUNT          753 a         1213 c         1044 g          662 t
ORIGIN      
        1 cggaatggcg ggtgacgact ggagccgcat catgaaccag atagatcacg cgcggaggca
       61 gagtggcggc taactccggg ccaaccttgt cgttgaaatc gccacgttca cgctgctgat
      121 cgacaagggt atcatccatc tggttgcggg tgccggcgcg tgcatatata atgatacagg
      181 aatgataggg gcggaacgcg atccgcagcg catcccactg actttcgacc ttccagccgg
      241 cttttgggcg tgaagcggac aagcgggatc acgacggaac cacgccggaa tgaaatccta
      301 caggtgaccg gcagttctcg aagatcaggc ttggcaaagg tgccgaacat tgatcatcgt
      361 gtagccaaga atcttgaaag catcgtgcag cgcgctgatg cgcccaaaaa cacagccaaa
      421 gctgtcggag cttacccacc caggcaaaca tctgctcaat tgtgcggaag cgctcttcga
      481 aaatggccag atcggagatg ccttatacca atcgcccttg atgttgaccc atcggcagca
      541 ccgagcaacc gtcatggcga gcgcgggctc gccatccatg cctttgtttc tgctcgtaaa
      601 aggcgtggat accggcatgc gccggcatga cggacggggt caaccgacga gtctgcatca
      661 atgccggttg gtattacgtc cccgcttggg ctgctttctg ccgcgcggat tggggttgat
      721 gtcgggagcc acgccgcgat tgaagatcgc cttgcggttg gtcggcagtc gtgggcgcga
      781 tcacgttacg atggcggtcg cagaaagtga ccacttggtc tcccttcccc tgcttgtggc
      841 cgctgaaccc acgtttgtca ccgtcccttt ttgccgccgt tgtcgtgccg tcgccataaa
      901 tgaccgctgt gtcgaggcgg ccgttctcat gaagcctcaa taccgacccg gtgaaattgc
      961 atccgcgcgg cccatgccga cccaccgccg ccagatgcgg ttaatacgag tgtagtggat
     1021 ttccggctta ccaccatcat tcttgtcgat cggcagcttc ttccactgga agccgaaata
     1081 caagaacttc gaaacgtagt tgaatatcaa ataaaggctc agattcgctg ctggaccgct
     1141 tctaccgggg acgaggtgcg gcaagacaaa ttgctcgaat caagcaatta ccgctggcag
     1201 cttgatttcc ccacattccg gacccatccc ccttccaaac ccagtcatcc cgcggtctgc
     1261 ccccaatcca cccaccaagt gcggaacaac cgctatccct ggcttgaccc cggcatcgcc
     1321 accgacgatg cagtccactg gaaaccccga accaggtcgg ggacagggag cggggcgacc
     1381 gaaccatcgg ccgtcgcaac agccaaccga agcaggagtc gatagggatg cgtgcaggat
     1441 tgggactagc aatggcgctc tggctgctcg ccacacccgc gacaagccat gcccaatcgc
     1501 ctgctccgcc aacgcccgcc cccccggcgc ccgccgccaa cgcggcacca atccgcacct
     1561 acggcctctc cctcctgggc aatcccgccc ttcccagtga cttcaagtcg ttcgaatacg
     1621 tcaacccgga cgcccccaaa ggcggcgaaa tcgtgctcag cagcgtcggc accttcgaca
     1681 gcttcaaccc gttcatcgtc cgcgggaacg ccccgataga gatgttgcgc gtctgggaca
     1741 ccctgctgaa accggatgcc gacgaagccg aatccgaata tggcctgctc gcgaaagtga
     1801 tcgagatcca agccgaccac atgggcgtcg ccttcgaact caatccggag gccaaattca
     1861 acgacggcac gcccgtcacc gcccaggacg tcgcctggac cttcaacacc ctgcgggaaa
     1921 aaggccgccc gttctaccgc cagtactacg ccgacgtcgc ctcggtcagc gtcgaaagcc
     1981 ccacccgcgt cgtcttccgc ttcaaatcca acaccaaccg tgaactggcg ctgatcctcg
     2041 gccagatgcc cgtcctaccc gaacattggt gggccggccg cgacttcgac aaacccctga
     2101 ccgacccccc gctcggttcc ggcccctaca aggtcggcca tttcgaattc ggccgtaccc
     2161 tgtccatggt ccgggtcccg gacgtctggt cgaaagacct gccggtcatg cggggcctca
     2221 acaatttcga cacctatcgc accgagttct tccgcgacag caccgtggcg ctggaggcct
     2281 tcaaggccgg tcagatcgat ctgcgggatg aaaacatcgc caaggaatgg gccaccgcct
     2341 acgacttccc cgccgtccag aaggggctgg tgaagaaggc cctgctgccc caccacatgc
     2401 ccacaggcat gcagggcttt ggcatgaaca cccgccggcc gatcttccag gatgtgcggg
     2461 taaggcatgc gctcgcgctg gcgttcgatt tcgaatgggc caacaagaac ctgttctatg
     2521 gcgcttacac ccggacccag agctatttca gcaacagcga cctcgcgtcc agcggcatcc
     2581 cggagggcgc tgaactcgcc ctgctggaca aatatcgcga ccaattgtcc cccgacatct
     2641 tcaccaagcc gttcacgctt ccggtcaccg atgcctccgg cgacaaccgg gaagaactgc
     2701 gtgccgccct gtctctgctg gagcaggccg gctggaaggt gaaagaccgc aagctggtca
     2761 acgccgaggg aaaaccgttc agcttcgaaa tcctgctgag ccaaccggcg ttcgagcgcg
     2821 tggcactgcc gtacgtgcaa tggctcacga agctgggcat cgatgcccat gtgcggacgg
     2881 ttgatccggc tcagttccaa cggttgtccg atacctacga ctttgacatg atcgtcgtcg
     2941 attatgacga gaccgaaagc cccggcaacg aacagaccgg ctactggact tgctccagcg
     3001 ccaagctgga gggcggaaac aacctgatgg gcgtgtgcag cccggtgatc gacgatcttg
     3061 tgcaccaaat cctgaccgcg cccgatcgca cgcatctggt ggtcgcaacg cacgccctcg
     3121 atcgggtcct gttgaacggg tggtatgtcg tgccgcaatg gtatctgcga accgtgcgcg
     3181 tcgcctactg ggatcgcttc gggcgccccg cacagcccgt ccgcaccggt ctggagttgg
     3241 acagttggtg gttggatccg gcaaaagccg ccgccaccga cgaagcgcgg cgccacggcc
     3301 tgtgatgcga tttagcaacg gtcgcaaccg tccgacgggc gtccccgact gatgggcgcc
     3361 tacctgatcc gccgcctgct gctggtgatc cctacgctgt tcggcatcat cgcgatcaat
     3421 ttcttcgtcg tgcagttcgc gcccggcgga ccggtcgaac aaatgatcgc ccaactgaaa
     3481 gggcacggcg gcggcgccat cggccgcatg acaggcgccg gcggtacgga gacgatgccg
     3541 atcggcaacg gcacctaccg cggcgcccgc ggcctggacc cgcatacagt ggccgacatc
     3601 aagaaaatgt tcggcttcga caagccggcc ccggaacggt tcgtgctgat gctgcgcggc
     3661 tacctgacct tt
//
LOCUS       DATAVD010001113         2075 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2528679, whole genome shotgun sequence.
ACCESSION   DATAVD010001113 DATAVD010000000
VERSION     DATAVD010001113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2528679"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VHX39_21210"
     CDS             <1..432
                     /locus_tag="VHX39_21210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent formaldehyde
                     dehydrogenase"
                     /protein_id="HEX3993697.1"
                     /translation="DLTNGRGADACIDAVGTEADATASFDSVVDRIKVATFMGTDRPH
                     VLRQAIHCCRNFGTVSIVGVYGGFLDKVPMGSAINRGLTFRMAQTPVQHYLPMLMDRI
                     QKGEIDPSFVITHRASLQDGPELYKTFRDKKDGCIKVVLKP"
     gene            449..1237
                     /locus_tag="VHX39_21215"
     CDS             449..1237
                     /locus_tag="VHX39_21215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3993698.1"
                     /translation="MIDKPRSLAVVTGASTGIGFELAKSCARNGFDLVVAADEAAVHT
                     AASAFRDMGVSVDAVEADLATIQGVDTLYAAIGGRPVEALLANAGRGLGKGFLDQDFD
                     AVRRVVDTNISGTLYLLQKVGRDMRTRGQGRILITGSIAGLMPGTYQAVYNGTKAFLD
                     SFSFALRHELKDTRVTVTCLMPGATETDFFERADMMDTKIGTGKKDDAADVAETGFKA
                     MMNGDGDVVTGWQNKLQSAIALVTPSDLLAEAHRRMAQPGTAKQ"
     gene            1326..2003
                     /locus_tag="VHX39_21220"
     CDS             1326..2003
                     /locus_tag="VHX39_21220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015074356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX3993699.1"
                     /translation="MTDSNDANGRRRPARALTEQASHAERVGDQEKAEALFAEAERLD
                     PDETLAVLRDQDLASPRQKEGRSGASSTFGIVLSVNGQRHAVTVDARTTLLDALRDRL
                     HLTGTKRGCDLGQCGACTVLLDGRRVTACLVFAVMAEGSDIETIEGLSRDGALHPMQQ
                     AFIAADGFQCGYCTPGQIMSAVGLLREGKAGSLTQIREEMSGNICRCGAYPGIVEAIR
                     SVAETSK"
BASE COUNT          419 a          599 c          665 g          392 t
ORIGIN      
        1 gacctgacaa acggcagggg tgccgatgca tgcatcgacg ccgtcggcac ggaagccgat
       61 gccacggcca gtttcgattc ggtcgtggac cggataaaag ttgccacgtt catgggcacc
      121 gaccggccgc atgtgctgcg gcaagcgatc cactgttgcc gcaacttcgg caccgtgtcg
      181 atcgtcggcg tgtatggtgg tttcctcgac aaggttccga tgggatcggc catcaaccgc
      241 gggcttacat ttcgcatggc gcagaccccc gtgcagcatt atctgccgat gctgatggac
      301 cgcatccaaa aaggcgagat cgatccctcg ttcgtcatca ctcaccgagc gtcgcttcag
      361 gacggtccgg aactctacaa gacttttcga gacaagaagg atggctgcat caaggtcgtg
      421 ctgaaaccat agcccggagg cccgaacaat gatcgataaa cctcgttcgc tcgctgtcgt
      481 gacgggtgca tctaccggta ttggtttcga actggcgaaa agctgtgcca ggaatggttt
      541 cgatctggtg gtggcagcgg acgaagccgc ggtccacacg gcggcttcgg cattccgcga
      601 tatgggtgtt tcggtcgatg cggttgaagc cgatctggcc accatacagg gcgtggacac
      661 gttgtacgcc gcgattggcg gccggccagt cgaggcattg cttgcgaatg ccggccgcgg
      721 ccttggcaaa ggcttcctgg accaggactt cgatgctgtt cgccgggtgg tcgatacgaa
      781 tatctccggt acactctacc tgttgcagaa ggtgggtcgc gatatgcgaa cgcgcggcca
      841 aggccgcatc ctgatcaccg ggtcgatcgc cggtttaatg ccgggcacgt atcaggcggt
      901 gtataacggg acaaaagcct tcctcgactc gttctcattt gcattacgac atgagttgaa
      961 ggacacgcgc gtcactgtca cctgcctgat gccgggggcg actgaaaccg atttctttga
     1021 gcgcgccgat atgatggaca cgaaaatcgg taccggcaaa aaggatgatg ccgcggatgt
     1081 cgctgaaact ggattcaagg cgatgatgaa cggggatggg gacgtcgtga cgggttggca
     1141 aaacaagttg caatcggcaa tagccctggt gactccatcc gacttgctgg ccgaggcaca
     1201 tcgccgcatg gcgcaaccag gtacggcgaa acagtgacgt tgttgtcggt gcaagccgcc
     1261 tgatcgacga tatacgcatc gccgccgcgg cgatctgaga ggtccagttt tgtgagaggt
     1321 ccgaaatgac tgacagtaac gacgcgaatg gacggcggcg tccggcccgt gccttgaccg
     1381 aacaagcgtc gcacgcggaa cgggttggcg accaggaaaa ggccgaggca ctgtttgccg
     1441 aagcggaacg gctggatcca gatgagacgc tggcggtcct gcgagaccag gatctcgctt
     1501 cgcctcgtca gaaggaaggc cgcagcggcg cgtcatcgac cttcggtatc gtcctgagcg
     1561 tcaacggcca aagacacgcg gtcaccgtcg atgcgcgtac cacgctgctg gatgcactgc
     1621 gtgatcggct gcatctgacc ggcacaaaac gcggatgcga cctgggccaa tgcggggcct
     1681 gcactgtctt gctggacggc cggcgcgtaa cggcctgcct ggtcttcgca gtgatggccg
     1741 agggcagcga catagaaacg atcgagggcc tgtcccgcga cggcgcgctg catccgatgc
     1801 agcaggcttt catcgcggcc gatgggttcc agtgtggcta ctgcacaccc ggacagatca
     1861 tgtccgccgt cggtttgctg cgggagggca aggccggctc cctgacccag attcgcgagg
     1921 agatgagcgg caatatctgc cgctgtggcg cctatcccgg catcgtcgag gcgatccggt
     1981 ccgtcgcgga gacctcgaaa tgaccccatt ctcctatgcg atcgcccgcg gcgaaacgat
     2041 ggcgttcgaa gcctgggcca gtaacccgaa cgccc
//
LOCUS       DATAVD010001114         3272 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2713845, whole genome shotgun sequence.
ACCESSION   DATAVD010001114 DATAVD010000000
VERSION     DATAVD010001114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3272
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2713845"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..761)
                     /locus_tag="VHX39_21225"
     CDS             complement(<1..761)
                     /locus_tag="VHX39_21225"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX3993700.1"
                     /translation="MAGLLEGKSALITGGGGGIGRATALIFAREGARLAISDAVRETA
                     EETVALVNQAGGQAIALSGDVTDSAAVQAMVDAVVSAYGRIDCAFNNAGIAGYQVNAS
                     GKKTHEWADESFDRMIGVNLKGVWLCMKHEIVRMLAQGGGRIVNTGSIAGLIGLPTSS
                     AYVAAKHGVLGLTKTAALEYAESNIRVNAVCPGYIETKMTEDTMRRRGAELMAKVPFH
                     RMGKPEEIAEMVLWLCTDRASYVSGAAYNVDGGYMA"
     gene            843..1442
                     /locus_tag="VHX39_21230"
     CDS             843..1442
                     /locus_tag="VHX39_21230"
                     /inference="COORDINATES: protein motif:HMM:NF036525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX3993701.1"
                     /translation="MRDEILAYKRERILEEAVKLFYERGFTGTTLDDIAAELGVTKPF
                     IYTHFRGKVELLAALCKPTIELALGAIANAAARPGTPSERLRIAITDFTKVVLQRQPN
                     IAIYFREEKNLSPEALAEINVLRREFDHLLSDLLLEGSAKGEFEIDDHSLAALALGGM
                     ISWAYTWYRPGGRLTLEETAAHMADLALRMAGVRVAIPA"
     gene            1518..1766
                     /locus_tag="VHX39_21235"
     CDS             1518..1766
                     /locus_tag="VHX39_21235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3126 family protein"
                     /protein_id="HEX3993702.1"
                     /translation="MTPLDIARVQAYLRKLFSNNLIRIVAPARKGLSVEFAVGDEVLG
                     TVYKDEEDGEISYSVTLTILDEDLPDVQAGPEPTPRRR"
     gene            complement(1768..3036)
                     /locus_tag="VHX39_21240"
     CDS             complement(1768..3036)
                     /locus_tag="VHX39_21240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993703.1"
                     /translation="MGNEPPKHPHGHMPALPAGLLQADDHKIRRVLAVVDGVADPAIS
                     QALLDTLRPRLATLRPVRPLRLTRLLFVPLDPLTVPMRGWHPSDPTVPRPVLAPIAKI
                     VRAGLGDLTPVIDRIIAGHKADAGQAITQAGELLWPRAAAILATAPPPEDLADTGLPL
                     SAYKLLAASIAAVLRRAPQLRSIALDGVLGSLATDDAAASDILANITNEPEIACAMIA
                     RLILVQSPHAMPLLGSIAKAGRTSDENDRLRAAVDSAVAIVLAHMERDTGFVHEIGHG
                     PLAGAATEVRRVLTLLHEIEADKSFSRQWPRLKTIRQKLDEVCRTRFARGVGESLVAP
                     LAAASDPVDGPAQTALESSARDLRKLEMTARNVGNPASYDALLRTASQTVAAAADAGT
                     LTPMRKFRLIEILAGSEAAGALYLKAAGVR"
     gene            complement(3078..>3272)
                     /locus_tag="VHX39_21245"
     CDS             complement(3078..>3272)
                     /locus_tag="VHX39_21245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993704.1"
                     /translation="VALVEIANYLPVIPAELRQWGRGRANMADGFAEQTHIALNEDWC
                     TGAALYDLIARNEQLRAVAA"
BASE COUNT          587 a         1097 c          992 g          596 t
ORIGIN      
        1 gccatgtatc cgccgtccac gttgtaagcg gcaccgctga cgtaggacgc gcgatcggtg
       61 caaagccaca gcaccatttc cgcgatctcc tccggcttcc ccatccgatg gaacggcact
      121 ttcgccatca actcggcgcc acggcggcgc atcgtgtcct cggtcatctt ggtctcgata
      181 taacccggac agaccgcatt aacccggatg ttgctttcgg catattccaa agctgccgtc
      241 ttggtcaaac ccaacacgcc atgcttggcc gcgacatagg ccgacgacgt cggcaggccg
      301 atcaatccgg caatcgagcc ggtgttgacg atccgcccgc cgccttgcgc cagcattcgc
      361 acaatctcat gcttcatgca caaccagaca cccttgagat tgacgccgat catgcggtcg
      421 aacgactcgt ccgcccattc atgcgtcttc ttgccggaag cgttgacctg atagccggcg
      481 atcccggcat tgttgaacgc gcagtcgatc cggccatagg cgctgaccac ggcatcaacc
      541 atcgcctgca ccgcggcgct atccgtcacg tcacccgaca gagcgattgc ctgcccaccc
      601 gcctggttca ccagcgccac ggtttcctcg gcggtttcac gcacggcgtc ggagattgcc
      661 agcctcgcac cctcgcgtgc gaagatcagc gcggtcgccc gtccaattcc gccaccgccg
      721 ccggtgatca gtgcggattt tccttccagc aaacctgcca tcgctccctc ctttgggtca
      781 gaaccccacg ctacccgtga gtagtctttc aatccagccc gtcctggcgt agaatggcag
      841 ccatgcgaga tgaaattctg gcctacaagc gcgagcgcat cctcgaggaa gcagtcaaac
      901 tgttctacga gcgaggcttt accggcacca ccctggacga cattgccgcc gaactcggcg
      961 tcaccaaacc gttcatttat acgcattttc gcggcaaggt cgagttgctg gcagcacttt
     1021 gcaagccaac catcgagctg gcgcttggtg ccattgccaa tgccgcggcg cgcccaggaa
     1081 cgccgtccga acgactgcga atcgccataa cggactttac gaaggtcgtg ctgcagcgcc
     1141 agcccaacat cgccatctat ttccgcgagg aaaagaacct ctcacccgag gccctggccg
     1201 agatcaacgt gttgcgccgg gaattcgacc acctgctgtc ggacctgctg ctcgaaggtt
     1261 ccgccaaggg agagttcgaa atcgacgacc attccctggc cgccctcgcc ctcggcggca
     1321 tgatctcctg ggcctatacg tggtaccggc cgggcgggcg gctgaccctg gaggaaaccg
     1381 ccgctcacat ggccgatctc gcgttgcgca tggccggggt gcgggtcgcc attccagcgt
     1441 gaattttccg ctctggtctg gacagcaggc cgcggcgcgg gcaaaggatg cgcatgaccg
     1501 gtggagacgg cgaaccgatg accccgctcg atattgctcg cgtgcaggcc tatttgcgca
     1561 agctgttcag caacaacctg atccgcatcg tggcaccggc gcgcaagggg ctttcggtgg
     1621 aattcgccgt cggcgatgag gtgctcggca ccgtctacaa agacgaggaa gacggcgaaa
     1681 tatcctattc cgtcacgctg acgatcctcg acgaggatct gcccgacgtg caggcgggcc
     1741 cggagccgac gccgcgccgc cgataagtca ccgcactccg gccgctttaa gatacagggc
     1801 cccggccgct tcggaccctg ccagaatttc gatcagccga aattttcgca tcggcgtcag
     1861 ggtaccggca tccgctgcgg ctgccacagt ctgcgacgcg gttcgcagca gggcgtcgta
     1921 gctggcgggg ttgccgacat tccgcgcggt catttccagc ttccgcaggt cccgggcgga
     1981 gctttcaagc gcggtttgtg cgggcccgtc caccggatcc gatgccgcgg cgagcggcgc
     2041 gaccaggctc tcgccgaccc cgcgggcaaa ccgtgtccga cacacttcat cgagcttttg
     2101 gcgaatggtt ttcaggcgcg gccactgccg ggaaaacgac ttatcggcct cgatttcatg
     2161 caacagcgtc agcacgcgcc ggacttccgt tgccgccccg gccagcgggc cgtggccaat
     2221 ctcgtgcacg aaccccgtgt cgcgctccat gtgggccaac acgatggcca cggcgctgtc
     2281 cactgctgcg cgcaacctgt cattttcgtc cgaggtccgg cccgctttgg caatactgcc
     2341 cagaagtggc atcgcgtggg gcgactgcac caggatcagg cgtgcgatca tggcgcaggc
     2401 gatctccggc tcgttggtaa tgttggccag aatgtccgac gcggcagcat cgtccgtggc
     2461 cagggagccc agtactccat ccagcgcaat gctgcgaagt tgcggcgcgc ggcgcagcac
     2521 cgcggcgata cttgcggcca gcagcttata ggcgctcagc ggcagaccgg tgtccgcgag
     2581 atcctcgggc ggcggcgcag tggcaaggat cgccgcggcc cgcggccaga gcagttcgcc
     2641 cgcctgggtg atcgcctgtc cagcatcggc cttgtggcct gcgataatgc ggtcgatgac
     2701 cggcgtcaga tctccgagtc ccgcccgaac gattttcgcg atcggggcga ggaccggacg
     2761 aggcaccgtg gggtcactcg gatgccaacc gcgcatcggc acggtcagcg ggtcgagggg
     2821 aacgaacaac agccgggtca gccgcagtgg ccgaaccggc cgcagcgtag cgaggcgcgg
     2881 ccgtaacgtg tccagcaacg cctgactgat tgccggatcg gcaacgccat ccaccaccgc
     2941 cagcacacgc cggattttgt ggtcgtcagc ttgcagaagt ccggcgggta aggccggcat
     3001 gtggccgtgc gggtgtttcg gcggttcatt gcccatcaat tgaaactcct gagtcctgat
     3061 acgacatcct ggctggctca ggctgcaacg gcgcgcagtt gctcattgcg ggcgatcagg
     3121 tcgtacaacg ctgcgccggt gcaccagtct tcattgagcg cgatgtgcgt ttgttcggcg
     3181 aacccgtcgg ccatattggc ccggccgcga ccccattgtc tcagctcggc ggggatcacc
     3241 gggaggtaat tcgcgatttc aaccagggcg ac
//
LOCUS       DATAVD010001115         8767 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2528985, whole genome shotgun sequence.
ACCESSION   DATAVD010001115 DATAVD010000000
VERSION     DATAVD010001115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8767
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2528985"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1614
                     /locus_tag="VHX39_21250"
     CDS             <1..1614
                     /locus_tag="VHX39_21250"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3993705.1"
                     /translation="FFIDAVLRRTLIELGTLNVTRVLGHSEKAVAYMADGYARIAGRP
                     AVCFAQSVGAANLASGLQDAFLANTPVIAFTGRKSPSMQHRNAYQEIPHQPMFSSVTK
                     FSAFVDSASELPRLMRQAWREAMTGSPGPAHLDLNGLQADVIETGMVADAPVTEPGFQ
                     MSMPSHRPTPSDSDIERAAATLRAAKKVTIVAGTGAIQSNAGKELLALAEALHAPVAT
                     SLGGRGVIPTRHRLAVGCAGNYAAPPTNQIVHAAELVLFVGCHTGDQVTHTWRVPAID
                     TQCVQIDINPCELGRSYPNTLGLMGDPKATLAKLVDAIGTGSRDSTFGDWAAGVMAAW
                     RQERAPLLANGSVPIWPDRLCDEITRALPHDGIVVADTGYSSIWSSSLIELNGEGQTY
                     LRAAGSLGWSFPAALGAKCAAPHRKVICWSGDGAIYYHLTELETAKRRGIAIVLVINN
                     NSGFGQGWPNIQRQQGNKPGDVRDLVRFGPTNFADVARVFGLRGIRVEDPSQIAPALK
                     DAMASDETVIVDVATDIDCRAPEPWLPGA"
     gene            1669..2430
                     /locus_tag="VHX39_21255"
     CDS             1669..2430
                     /locus_tag="VHX39_21255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3993706.1"
                     /translation="MISYDLAGKTALVTGGASGIGFATARMLAKFGATVAINFLADDP
                     RGPEAVNKLIDEGGKAIMAPGSVGEAGDAEAMVLKAVADLGRLDLLVNNAGTPGTNRR
                     ISPPELELITEDLWNLLLGVNLLGVFRCAKAAAPALTEAHGAIVNTASIAGLGRAGSS
                     LAYGATKAGVVSLTQNLARALGPNVRVNAIAPGAVDSSWMVEWSNQDRQQSIERAVLK
                     RRCQPEDLAEVILFLGFGAAMVTGQTITVDGGLTL"
     gene            complement(2482..3798)
                     /locus_tag="VHX39_21260"
     CDS             complement(2482..3798)
                     /locus_tag="VHX39_21260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010667852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEX3993707.1"
                     /translation="MLAAAPAFADDAPPKLDSGDTAWMLSSTALVLLMTIPGLALFYA
                     GMVRKKNILATMMQSFTICCIVTIVWMVAGYSIAFTTGTPYMGDFSRIMLHGIADHIV
                     KGNDTQAFVLASGIKGVSDMVTTIPETVYMMFQMTFAIITPALIAGAFADRMKFSAMC
                     LFMTLWSLLIYAPVAHWVWAPSGWANQLGVLDFAGGTVVHINAGIAGLVCALVLGKRN
                     GYGTVNMAPYNLAYAVIGASLLWVGWFGFNAGSAVAANGRAGMAMTVTQIATAAAALG
                     WTFAEWIAKGKPSVLGAASGAVAGLVAITPASGFVLPGGSLVIGIAAGVGCFWSATSL
                     KHMLGYDDSLDCFGVHGVGGIIGALLTGVFAYGPLSATDASPDGSPGGMGQFILQCEG
                     VTSTLVYSGVGTFVLLMIVKAIIGLRVNEEEEREGLDIVLHGEQVF"
     gene            complement(3906..4244)
                     /locus_tag="VHX39_21265"
     CDS             complement(3906..4244)
                     /locus_tag="VHX39_21265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007677283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEX3993708.1"
                     /translation="MKLIMAIIKPFKLDDVREALTPLGVQGLTVTEVKGFGRQKGQTE
                     IYRGAEYHVSFLPKVKIEVVVGDDLAEGVIEAIAKAANTGKIGDGKIFVLDVERAMRI
                     RTGETDIAAL"
     gene            complement(4665..6095)
                     /gene="glnA"
                     /locus_tag="VHX39_21270"
     CDS             complement(4665..6095)
                     /gene="glnA"
                     /locus_tag="VHX39_21270"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019089818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEX3993709.1"
                     /translation="MVKKPTDSSAMSKVQEMISEHTVEYVDLRFTDPRGKWQHTAQHV
                     STMDEDAFRDGIMFDGSSIAGWKAINESDMILMPDPDTCVMDPFSAKPSMILFCDIIE
                     PSTGQGYSRDPRSTSKKAEAYVKSSGVGDAVYFGPEAEFFIFDSVKFGTGGNYGMYQL
                     DSQEGPQASVKDYPEGNMGHRPTIKGGYFPVPPVDADSDLRAEMLSTMGEMGVAIEKH
                     HHEVAQSQHELGMKFGPMTRMADHLQIYKYCIHNVANSYGKTATFMPKPIYGDNGSGM
                     HCHQSIWKGGKPLFAGNGYADLSETCLYYIGGIIKHAKALNAFTNPATNSYKRLIPGF
                     EAPVLLAYSARNRSASCRIPYATNPKAKRVEVRFPDAAANPYLAFAAMLMAGLDGIRN
                     KIHPGDPMDKDLYDLPPEELKGIPTVCGSLREALGALEADHEFLLAGDVFGTDQIESY
                     IELKWSEVYRFEHTPHPVEFEMYYSV"
     gene            complement(6355..6693)
                     /locus_tag="VHX39_21275"
     CDS             complement(6355..6693)
                     /locus_tag="VHX39_21275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003622497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEX3993710.1"
                     /translation="MKKIEAVIKPFKLDEVKEALHEVGLQGITVVEAKGFGRQKGHTE
                     LYRGAEYVVDFLPKVKIEVVCEDSVVERAVEAIINSARTGRIGDGKIFISSVEEVIRI
                     RTGERGEAAI"
     gene            7110..8279
                     /locus_tag="VHX39_21280"
     CDS             7110..8279
                     /locus_tag="VHX39_21280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="HEX3993711.1"
                     /translation="MREANTYLGSIGTTIFTVMSALATEHKSINLGQGFPDTDGPEDV
                     VQAAADALKDGRNQYPPMPGVPELRQAVAAANRRFYDLDVDWAAEVTVTSGATEAITA
                     CLMAVLNPGDEVVLIEPLYDTYVPVVRMLGAIPRIVRLAPPHWELPRAELADAFGAKT
                     KAILINSPMNPCGKVFTRDELEFLADLVQRHDSYAICDEVYEHLVFDGKRHIPLMTLP
                     GMRERTMRIGSAGKTFSLTGWKVGYITAAANLTPLVQKAHQNLTFTTAPNLQRAVAVG
                     LSKDDDYFASLSRNLQARRDQMAAGLAEAGFDVLPAQGSYFITTDFTPLRFNGDDVAF
                     CRHITEQAGVTAIPVSAFYDAPDAPRHYARFAFCKRPEVLDEALARLRRHFASAR"
     gene            8320..8395
                     /locus_tag="VHX39_21285"
     tRNA            8320..8395
                     /locus_tag="VHX39_21285"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8353..8355,aa:His,seq:gtg)
     gene            8439..>8767
                     /locus_tag="VHX39_21290"
     CDS             8439..>8767
                     /locus_tag="VHX39_21290"
                     /inference="COORDINATES: protein motif:HMM:NF024139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3993712.1"
                     /translation="MEIDLPDTISGETLQQAQKAAAALRTLLGEMTLPAGLDAAAVSA
                     LLTVVDCVAQAAAEDNTDLNPSEAAERLRMARPSVMRLIARGELSSRKDGGHYVLSPR
                     ELRSFQA"
BASE COUNT         1670 a         2751 c         2627 g         1719 t
ORIGIN      
        1 ttcttcatcg acgcggtcct gcgccgcacg ctgatcgagc ttggtacttt gaacgtcacc
       61 cgcgtactgg ggcatagcga aaaggccgtg gcttatatgg cagacggcta tgcccggatc
      121 gctggacgtc ctgccgtctg cttcgcccaa tcggttggcg cagcgaacct cgcttccggc
      181 ttgcaggacg cctttctcgc caacaccccg gtcatcgcat tcaccggccg caaatcgcca
      241 tccatgcaac atcgcaatgc ctatcaggag attccgcatc agccgatgtt ctcgtcggtg
      301 acgaaattct ccgccttcgt cgacagcgcg tccgagttgc cgaggctgat gcgccaggcg
      361 tggcgcgagg cgatgaccgg ctcgccggga cccgcacatc tcgacctgaa cggactacag
      421 gccgatgtga tcgagaccgg aatggtcgcc gacgcgcccg tgaccgaacc cggatttcaa
      481 atgtcgatgc cttcgcaccg tccaacgccc tccgacagcg atatcgagcg cgctgcggcg
      541 acgttgcgcg cggcgaagaa ggtcaccatc gtcgccggca ccggcgccat acaatccaat
      601 gccggcaaag agttgctcgc gttggccgag gctctgcatg cgccggtcgc gacctcgctt
      661 ggcggccgcg gcgtcattcc cacacgccat cggcttgcag ttggttgcgc cggaaactat
      721 gccgcgccgc cgaccaacca gatcgtgcac gccgctgaac tggtgctgtt tgtcggctgc
      781 cacaccggcg atcaggttac ccatacctgg cgcgttccgg cgatcgatac gcaatgcgtg
      841 caaatcgata tcaatccgtg cgaactcggc cgttcctacc ccaatacact tggactgatg
      901 ggcgacccaa aggcgacact ggcgaaactc gtcgatgcca tcgggaccgg atcgcgcgac
      961 agcacatttg gcgattgggc ggcaggagtg atggcggcat ggcggcagga gcgggcaccg
     1021 ttgctcgcca atggatcggt gccgatttgg ccggaccggt tatgcgacga gatcacgcgc
     1081 gctctgccgc atgacgggat cgttgtcgcc gataccggat attccagcat ctggagcagt
     1141 tcactcatcg aactgaacgg cgaggggcag acctatctgc gcgcagcagg ctccctgggt
     1201 tggtcgttcc ccgccgctct tggagccaaa tgtgcggcac cacaccgaaa ggtgatctgc
     1261 tggtcgggcg atggggcgat ttattaccat ttgaccgaac tggaaaccgc gaagcggcgc
     1321 ggcatcgcca tcgtcctggt gatcaacaac aactcgggct tcggtcaggg ctggccgaac
     1381 atccagcgcc agcaaggcaa caagccgggc gacgtgcgtg acctggtgcg cttcgggccg
     1441 accaatttcg ccgatgtggc gcgagtcttc ggcctgcgcg gtattcgcgt cgaggatccg
     1501 tcacagattg ctccggccct gaaagacgcc atggcctccg acgaaaccgt gatcgtcgat
     1561 gtcgccaccg acattgattg ccgcgccccg gaaccctggc tgccgggagc ctgatcagca
     1621 gtgcggcagc gtaccccggc ctggacgtaa cgaaataaag gagttgccat gatcagctac
     1681 gaccttgccg gcaagaccgc tttggtgacc ggtggtgcct cgggtatcgg gtttgccacg
     1741 gcgcgcatgc tggcgaaatt cggtgccacc gtggcgatca atttcctcgc cgatgatccg
     1801 cgcggccccg aggcggtgaa caaactgatc gacgaaggcg gcaaggccat tatggcaccg
     1861 ggcagcgtcg gcgaagctgg tgacgcggaa gcgatggtgc tgaaggcagt ggccgacctc
     1921 ggccgcctcg atttgctggt caacaatgcc ggcacgccgg gtaccaatcg gcgcatcagc
     1981 ccgccggaac ttgaactgat caccgaggat ctgtggaacc tgttactcgg cgtcaacctt
     2041 ctgggggtgt ttcgttgcgc caaagcggcc gcgccggcgt tgaccgaagc gcatggcgcc
     2101 atcgtcaaca ctgcctcgat cgccgggctt gggcgggccg gcagcagtct cgcttacggc
     2161 gcaacgaaag ccggggtggt gagcctgaca cagaacctcg cccgcgcttt gggtcccaac
     2221 gtgcgggtca acgcgatcgc gccaggagcc gtcgatagtt cctggatggt ggagtggagc
     2281 aatcaggatc gccaacagtc gatcgagcgg gcggtgctga aacgccgctg ccaacccgag
     2341 gaccttgctg aggttatcct gtttctgggc tttggtgcgg cgatggtgac cggacagacc
     2401 atcaccgtcg acggcggttt gactctataa cgcgccccgg tcaccgggca cttccacccg
     2461 gtgaccgtga cggcgataag atcagaacac ctgttcgccg tgcagaacga tgtccaaccc
     2521 ttcgcgctct tcttcctcgt ttacccgcag tccaatgatc gccttgacga tcatcagcag
     2581 cacgaacgtt ccaacaccgc tataaactaa cgttgacgtc accccttcgc actgcagaat
     2641 aaattgcccc atccctcctg ggctgccatc cgggctggca tcggtcgcag acagcgggcc
     2701 ataagcaaac actccggtca gcaaggcgcc aatgatccct ccgaccccat gcacaccgaa
     2761 gcagtcgagg ctgtcgtcgt aacccagcat gtgcttgagg ctggtggccg accagaaaca
     2821 gcccacaccg gccgcgatgc ctattacaag cgatccgcca ggtaagacaa agcccgaggc
     2881 cggcgtgatt gcgaccagcc cagcaaccgc tcccgacgcc gcaccaagca ccgaaggctt
     2941 gcctttcgca atccactcag cgaacgtcca gccaagcgcc gccgccgcag tggcgatttg
     3001 cgtcactgtc atggccattc cggcgcgccc attggccgca accgccgagc ccgcgttgaa
     3061 cccgaaccag ccgacccaaa gcaaagaggc accgatcacc gcgtatgcca ggttgtacgg
     3121 cgccatattg acggtgccgt aaccgttacg cttgccaagc accagtgcgc aaaccaaacc
     3181 agcaatcccg gcgttgatat gcaccacagt gccgcccgcg aaatcgagca cgcccagttg
     3241 atttgcccaa ccggagggag cccagaccca gtgagcgact ggcgcgtaga tcagtaatga
     3301 ccatagcgtc atgaacagac acatcgccga gaacttcatg cgatcggcga acgccccggc
     3361 gatcagtgcc ggagtgatga tcgcaaaggt catctggaac atcatgtata ccgtctcggg
     3421 gatcgtcgtc accatgtcgg agacgccttt gatgcccgac gccagcacga atgcctgcgt
     3481 atcgttgcct ttcacgatgt gatcggcgat gccgtgcagc atgatgcgtg agaagtcgcc
     3541 catgtacggc gtaccggtgg tgaaggcgat gctgtacccg gcgaccatcc agacgatcgt
     3601 aacgatgcag caaatcgtaa acgattgcat catggtcgcg agaatgttct tttttcgtac
     3661 catcccggca taaaacagcg cgagaccagg gatcgtcatc agcaacacca gcgccgtgct
     3721 ggacagcatc caggcggtat cgccggaatc cagtttcggc ggcgcatcgt ctgcaaacgc
     3781 cggcgcggct gccagcatga tggtcagcag ggcagtcagg ccccagctca aacggggtcg
     3841 agtcatcaca tcaattttcc ttgactattt tcagatggcg ccgcgcgggc gccggttcgg
     3901 gccggtcaga gcgcggcgat atcggtttcg cccgtacgga tccgcatcgc tcgttccaca
     3961 tccagcacga aaatcttgcc gtcgccgatt ttgccggtat tggcggcttt ggcgattgcc
     4021 tcgatcacgc cctccgccaa atcatcgcca accacgacct cgatcttcac ctttggcaga
     4081 aagctgacgt gatattctgc accgcggtat atttcagtct gccctttctg gcggccgaac
     4141 cctttgacct cggtgaccgt gaggccttgc acgccaaggg gcgtcagtgc ttcgcgcacg
     4201 tcgtcaagtt tgaagggttt gatgatggcc atgatcagtt tcatgatcga ctgccctgtg
     4261 ctgttgagga ttgcatcgtt tatctcccgc gcggccgccg gtactgggcg ggtcgctcag
     4321 tcacaattca acaatcgtgc caggtctgcg gttccgtcgc gtcgacgcgc tccgtcacac
     4381 aatagacttc tttcatcgca gagcgtggtg atcgcccgcg gcagtacagg gaattgtatg
     4441 aggaccgccg cggccgacaa cccaggatgg tttcgcgcaa ccgatcgttc gtgggtagca
     4501 gcaattgcgc cgtgtgacgg ttgctggacg cgatgccgcc gatcggcgat cgaattgcct
     4561 aacaaaagag caaatgcatc gcccccgggc ttgctgcatt gtacaataaa aacccccgca
     4621 atccgaagga tgcgggggaa tttaccgtag gttaagctgg cagatcagac cgagtagtac
     4681 atttcgaact cgacgggatg cggcgtatgt tcgaaacgat acacttcgct ccacttcagt
     4741 tcgatatagc tttcaatctg atcggtgccg aagacatcgc cggccagcaa gaattcatgg
     4801 tcggcttcca gcgcacccag cgcttcgcgc aggctgccac agacggttgg aatgcctttc
     4861 agttcttcgg gcggcaggtc gtacaggtcc ttgtccatcg gatcacccgg atggatcttg
     4921 ttgcggatac catccaggcc agccatcagc atcgccgcga aggccaggta aggattggcc
     4981 gctgcgtcag ggaaccgcac ttccacccgc ttggctttcg ggttggtggc gtacgggatg
     5041 cggcaggacg ccgagcgatt gcgtgccgaa taggccagca gcacgggtgc ctcgaagccg
     5101 gggatcagcc gcttgtagct gttggtcgcc gggttggtga aggcattcag cgccttggcg
     5161 tgcttgatga tgccgccaat ataatacagg caggtctctg acagatcggc atagccattg
     5221 ccggcgaaca gcggcttgcc gcctttccag atcgattggt ggcaatgcat gcccgagccg
     5281 ttgtcgccat agatcggctt cggcatgaac gttgcggtct tgccgtaact gttggcgacg
     5341 ttgtggatgc agtatttata gatctgcagg tggtcggcca tgcgggtcat cggcccgaac
     5401 ttcatgccga gttcgtgctg gctttgcgcc acctcgtgat ggtgcttttc gatcgccaca
     5461 cccatctcgc ccatggtcga cagcatttcg gcacgcaggt cgctgtcggc atcgaccggc
     5521 ggcaccggaa aatagccgcc tttgatcgtc ggccggtgcc ccatgttgcc ttccggatag
     5581 tccttcaccg aggcctgcgg gccttcctgg ctatccagct gatacatgcc gtagttgccg
     5641 ccggtgccga acttcacgct gtcgaaaatg aagaattctg cttccggacc gaagtacacc
     5701 gcatcgccga cgccggacga cttcacataa gcttcggcct ttttcgacgt gctgcgcgga
     5761 tctcggctgt agccctgacc agtcgacggc tcgataatat cgcagaacaa aatcatactc
     5821 ggcttggccg agaacgggtc catcacgcag gtgtcggggt ccggcatcag gatcatgtcg
     5881 gactcgttga tcgccttcca gccggcgatc gacgagccgt cgaacatgat gccgtcgcgg
     5941 aacgcatcct cgtccatcgt ggagacgtgc tgcgcagtat gttgccactt gccgcgcgga
     6001 tcggtgaacc gcaggtccac gtattccacg gtatgctcgg agatcatctc ctgcaccttg
     6061 ctcatggctg agctgtcggt cggctttttc accatgtctc ctgattcccc gtccataaca
     6121 tcatgaaaac cgcgcctgga tcaccagccg cgcgggcact acaagtccgc acagcgcgaa
     6181 cccttcctgg atggccccac ctcggttccg ccgggggccg caagcggttg atctgtctgc
     6241 tccctacggg cttctgctgt gaagggacca acctccacag gcgctttcac cccaaccgac
     6301 ccgacgtccc gacgtggcgc caaacagcgc ttgcagggat gttgttgtct tgcgtcaaat
     6361 cgcggcctcg ccgcgctcgc cagtgcgaat gcggatgact tcttcaaccg acgagatgaa
     6421 gatcttgcca tccccgatgc ggccggtgcg ggcggaattg atgatcgcct ccaccgcacg
     6481 ctcgacgacc gagtcttcgc aaacgacctc gattttcact ttcggcagga agtccaccac
     6541 atattcggcg ccgcgataga gttcggtatg ccccttctgg cgtccgaaac ctttcgcttc
     6601 aacgacggtg atgccttgca ggccgacctc gtgcagcgcc tccttcacct cgtccaactt
     6661 gaacggttta atgacggcct cgattttctt catcgctcca tgcccggtcg taaaccaggt
     6721 cctccaaaaa tcgccgccgc gcgcccggcc ggaggggcac ggcggcacga acagcacgtc
     6781 aggtttgcac ggcgcgtgcc aggtatcaat gcgagattgc atcgcacgtc atgctggcga
     6841 tttttcgcgg tgctgcctgg aattcaggct ggagcaggtg aggggcgtgt tggccttttg
     6901 cctaaattgt gggcgagatt tgatgtttcg taaggcttga acggataggg cttgtatagt
     6961 tgttgcccgg tccgatgccg ctttggccgc ccttttccag gcaactggcg cgacttcgca
     7021 aacaccgtca tccgggttat ggctcacagt ctcgaacgcc gtccggggac cgcctggcgg
     7081 acgacaaact ccacacgagg cgccggacga tgcgtgaagc gaacacctat cttggctcga
     7141 tcggaacgac gatcttcact gtgatgtcgg cgctggcgac agagcataag tcgatcaacc
     7201 tcgggcaggg atttccggac accgacgggc ccgaggacgt cgtccaggcc gctgccgacg
     7261 ctctgaagga cggccgcaat cagtatccgc cgatgcccgg cgtgcctgaa ctgcgccagg
     7321 ccgtcgccgc cgccaatcgc cggttctacg atctcgacgt cgactgggcc gccgaagtga
     7381 cggtgacctc gggcgccacc gaggcaatta ccgcctgcct gatggccgtg ctcaatcccg
     7441 gcgatgaggt cgtgctgatc gagcccttgt atgacaccta cgtcccggtc gtccgcatgc
     7501 tgggcgccat tcctcgcatc gtacggttgg cgccgccgca ctgggagctg ccgcgcgctg
     7561 aactggcgga cgcgttcgga gcgaagacca aggcgatcct gatcaattcc ccgatgaacc
     7621 cgtgcggcaa ggtgtttacc cgggacgaac tggaattcct ggcggacctc gtgcaacgcc
     7681 acgacagcta tgcgatctgc gacgaggtct atgaacacct ggtgttcgac ggcaaacgcc
     7741 atattcccct gatgaccctg ccggggatgc gcgagcggac gatgcggatc ggcagcgccg
     7801 ggaagacgtt ttcgctgacc ggatggaaag ttggctacat taccgcggcg gccaacctga
     7861 cgcctctggt gcaaaaagcg catcaaaacc tgacgttcac gaccgcgccc aacctgcagc
     7921 gcgcagtggc tgttggtttg agcaaggacg acgactattt cgcctcgctg tcacgcaacc
     7981 tgcaggcgcg gcgagaccaa atggcagccg gacttgccga ggccgggttc gatgtgctgc
     8041 cggcgcaagg gtcgtatttc attaccaccg attttacccc attgcgcttc aacggggacg
     8101 atgtcgcgtt ttgtcgccat atcaccgagc aggccggggt gacggccatc ccggtctcgg
     8161 cgttttacga tgcgccggac gcgcctcggc attatgcgcg gttcgcgttc tgcaagcggc
     8221 ctgaagtgct ggatgaggcg cttgcccgtt tgcgtcggca cttcgcctca gctcgttgac
     8281 gacggacggg tcgccggatt acatcccgcc ccttggatgg cgggcatagc tcagttggta
     8341 gagcgccagg ttgtggtctt ggatgccacg ggttcgagtc ccgttgctcg ccccaacgcc
     8401 tccgcaggcg agtgccgcac ccgggaaggg tcccttgcat ggaaatcgac ctgccagaca
     8461 cgatctcggg cgagacactg cagcaggccc agaaagcggc cgcagcattg cgtacgctgt
     8521 tgggcgaaat gacgctgccg gctggcctcg atgccgctgc ggtcagtgct ttgctcaccg
     8581 ttgtcgattg tgtggcgcag gcggcggccg aagacaacac cgacctcaac ccgtctgagg
     8641 cggccgagcg actgcgtatg gcccgtccgt cggtgatgcg gctgattgca cgcggcgaat
     8701 tgtcgtcccg caaggatggc ggccattacg tgctgtcgcc cagagaattg cggtcgttcc
     8761 aggcgag
//
LOCUS       DATAVD010001116         1604 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1224823, whole genome shotgun sequence.
ACCESSION   DATAVD010001116 DATAVD010000000
VERSION     DATAVD010001116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1604
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1224823"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..386)
                     /locus_tag="VHX39_21295"
     CDS             complement(<1..386)
                     /locus_tag="VHX39_21295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993713.1"
                     /translation="MPRNNLTGQPPFRVDASAQARSLLDFDRAPISLGLYPLVRDHHR
                     RIVLTGNGATHAAALPSWRRLVAGGKAASWIDIENLLQNPRLVTSDCLLIAASRSGAG
                     SQIRALADRLGDTMRPAATVAITDDLT"
     gene            668..>1604
                     /locus_tag="VHX39_21300"
     CDS             668..>1604
                     /locus_tag="VHX39_21300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993714.1"
                     /translation="MSELLPAGMVTLLLADVEDSARLWDTQPIEMTAADGLLQRAMSE
                     AIREHDGVQPAEQGDGDSFVVAFARASDALACALQLQCAALAPIRLRIGLHTSEVQLR
                     DDNNYTGPAITRTARLRDLAHGGQTVLSRVTEEVLIDRLPDGAWLTDLGIHRLRGLPR
                     RERVAQLCHPSLRNEFPALHVSNDGAAQGLPVQLTTFIGRNAEMADVRQLLADHRLVT
                     LVGSGGVGKTRLAVQVAAELSADFGNVWYLDLAPISQPDLLPATLARTLGLPNQPGGS
                     PTDSALRFLADLPAVLVLDNCEHLLDATAGLVTAVI"
BASE COUNT          296 a          500 c          509 g          299 t
ORIGIN      
        1 gtcaagtcat cggtgatcgc taccgtcgct gccggtctca tggtgtcgcc gagtcgatca
       61 gctaaagcgc gtatttgact gccagcgccg gatcgcgatg cagcgatcag caggcaatct
      121 gacgtaacaa ggcgtggatt ctgcaacagg ttttcgatat cgatccacga tgcggctttg
      181 ccgccggcga ccagccggcg ccagctcggc agggccgcag catgcgtcgc cccgttacca
      241 gtaaggacga tacggcgatg gtgatcgcgc acgagcggat acaaacccag cgaaatcggt
      301 gcccgatcga aatcgagcag tgatcgtgcc tgggcgctcg cgtcgacgcg aaacgggggt
      361 tgaccagtga gattgttgcg cggcaacggt gcctcgcaag gtgaaagtgc tgttgcgggg
      421 ttcaaaagtt cagcgcccct tcccggttac cggccaccgg ctgtgatttg gtcaagtgcc
      481 ctaacgagtc gactatgtgg tctcagccgc gctcagtcat cggcgaaatc gcgtaaatac
      541 agcggggcag gctcgtacat aaatagaagg gccgagatgt ggcgtacgcg tttcccgcaa
      601 gctggctacc atcggggaga tcgttctcca ggcgggatcg ccgtcgttga accgaagcga
      661 tgtagaggtg agtgaactgc tgccggcggg gatggtgacg ttgctcctgg ccgacgtcga
      721 agactcggca cggctgtggg acacccaacc catagagatg accgccgcgg atggccttct
      781 gcagcgagcg atgtcagaag cgatccgcga gcacgatgga gtgcagccag ccgaacaagg
      841 cgacggcgac agcttcgtgg tcgcgttcgc ccgcgccagc gacgcgttgg catgtgcgtt
      901 gcaattgcag tgcgcagcac tagccccgat ccggctccgt atcggtttgc acacgagtga
      961 ggtgcagctg cgtgacgaca acaattacac gggtccggca attacccgca ccgcgcgcct
     1021 gcgcgatctg gcccacgggg gccaaaccgt gttgtcgcgc gtgaccgagg aggtgctcat
     1081 cgaccggctc cccgacggtg catggctgac ggatctgggc attcaccgcc tacgaggtct
     1141 gcctcgtcgg gagcgcgtcg ctcaactgtg ccaccccagc ttgcgtaacg aatttcccgc
     1201 actgcatgtc tccaatgatg gtgccgccca gggcctcccg gtgcagctga cgacattcat
     1261 tggtcgcaat gcggaaatgg ccgatgtacg ccaactgttg gccgatcacc ggctggtgac
     1321 cttggtcggc tccggtggcg tcggcaaaac ccgtcttgcc gtgcaggtcg ccgccgagct
     1381 cagcgctgat ttcggcaacg tctggtacct ggatctggcg ccaatttccc agccggacct
     1441 cctgccggcc accctggcgc gaaccctcgg cctgcccaac cagcccggag gctcccccac
     1501 cgacagcgcc ctgcgtttcc tcgctgatct tcccgccgtg ctggtactcg ataattgtga
     1561 gcatctgctc gacgcgaccg ccggactggt gacagcagtg atcg
//
LOCUS       DATAVD010001117         1874 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_110304, whole genome shotgun sequence.
ACCESSION   DATAVD010001117 DATAVD010000000
VERSION     DATAVD010001117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110304"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            34..561
                     /locus_tag="VHX39_21305"
     CDS             34..561
                     /locus_tag="VHX39_21305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993715.1"
                     /translation="MTVPTTSIVASLYPAEQYSSCPNAAVMALNYNWSAMTTLVNSMS
                     PNGNTNQAIGLQLGWQSLVGGGPFPAPPAMDPKYQYSQIIILLTDGLNTQDRWYTNQT
                     SIDNRQAITCANAKAAGIVLYTVQVNTGGDPTSSLLKTCATDSSKFFLLTSASQIVAT
                     FTQIGTALSNLRISQ"
     gene            complement(655..864)
                     /locus_tag="VHX39_21310"
     CDS             complement(655..864)
                     /locus_tag="VHX39_21310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993716.1"
                     /translation="MAKRLKAHKANRANGPACPICLGAMTLRSTIPPAHIFPELRTYR
                     CDGCGNLRTVEDERDLAASTVRKAA"
BASE COUNT          362 a          603 c          563 g          346 t
ORIGIN      
        1 tccggcccaa gttccggcaa ctacgacacc aacgtgaccg ttccgaccac cagcatcgtc
       61 gcgtcgctct acccagccga gcagtacagc tcctgcccca acgcggcggt gatggcgctg
      121 aactacaact ggagtgcgat gaccacgttg gtcaattcga tgtcgccgaa cggcaacacc
      181 aaccaggcga tcggccttca gctcggctgg cagtcgctgg tcggcggcgg cccgttcccg
      241 gcgccgccgg cgatggaccc gaagtaccag tacagccaga tcatcatcct tctgaccgac
      301 ggcttgaaca cacaggatcg ctggtacacc aatcagacct cgatcgacaa tcgtcaggcg
      361 attacctgcg ccaacgccaa ggcagccggc atcgtgctct acacggtgca ggtcaacacc
      421 ggcggcgatc cgacctcaag cctgctgaag acttgcgcca ccgactccag caagttcttc
      481 ctgctgacct cggcgagcca gatcgtcgcc acgttcacgc agatcggcac cgcgctttcc
      541 aacctgcgca tctcgcagta ggagcggccg cccagacaag cgaaagcccg gccgggaggc
      601 cgggcttttt gcattcaggg ctgcacgcgt ggagcgaccc aagtgttgac cggactatgc
      661 cgccttgcgg accgtggatg cggccagatc gcgctcatcc tctacggttc gcaggttgcc
      721 gcagccgtca catcgatagg ttcgcagctc cggaaaaata tgcgccggtg gaatggtact
      781 cctgagcgtc atcgcgccca ggcagatcgg gcacgccggg ccgttggccc gattggcttt
      841 gtgggccttc aatcgtttcg ccatgcgagg ttccccgttg aatcgtgaca cacaaagtcg
      901 cgacggagga tttcggttcc aggcggtggc tttttttgga ccggatggaa gcaagacgcg
      961 ggctatccct gcggggatat cccactccgt catccccgaa gttgccgcga gtcatccctc
     1021 cccgccagga gagggatgct gttgcgccgc cggggacaga agcaagcgcc gtactatccc
     1081 cgctgctatc ccgcaaaata aagttcgcct ccggcaaata aatcccttgg cgaacttatc
     1141 cccgcacccc tgtggcggcc tgatactgcg tgcaggccgg tccacccgag ggcgcttcgc
     1201 gaggcgtcgt taagcgggac cggagagcgg tggcggcgca cgggtgcaac acgcacaccc
     1261 aacgcgcggc ggtccaagcc gcagtgtccc ggtgccacag ggtggcatca ccgagtcttt
     1321 ggtggctggc gccgtaactc cgtgccaacg gccaggcgca agtcgagact caaaagcggt
     1381 ggttaggaac ctcagaccac cgggggcatt gcggagcaaa cctcaaacac cgcgcgcggg
     1441 acgctggaga gatggcggac ttgcgggttt gtttccggaa tttttccgcg ggtctgtcgg
     1501 acctgcggcg tcccgcgcgc ccctcggact ttttccgatg gcgcatcggc accatgactc
     1561 ggatgcaaac gcatcgcgag aatgcggccg cgcgccgacg attcgaaaac cgagtcgcgc
     1621 ctgattcgat tcggaggaat gtttcgatgg cggctgaatt ctcgcggagc actatcattt
     1681 cagagcggtg cgttgacttt cggcgaacgc agatgtcgtc tgcattttcc cacatcatcg
     1741 ttgcggcttc gcagagtttt cctgcgtttt caaaaaacga atcattgcgt ttgcgggtcc
     1801 gcgggccaac tctccgcgcc catgacggcc aacgagccgt tgattcgata cagggaaagg
     1861 atcggtccga tgac
//
LOCUS       DATAVD010001118         2311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1409298, whole genome shotgun sequence.
ACCESSION   DATAVD010001118 DATAVD010000000
VERSION     DATAVD010001118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1409298"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(242..1498)
                     /locus_tag="VHX39_21315"
     CDS             complement(242..1498)
                     /locus_tag="VHX39_21315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993717.1"
                     /translation="MNRLDLRQNAGFDQLQRMNLLWSEMSAIEQRAWLSRTELVLPPG
                     ETYRSELTLLPGGAVALRSPTEVLVCDPVEAAVFNQAEVKQLRRLLRGRADVSTLLHT
                     EDGVTLQRRVPKHLPPQAVSVVPNVGKLPFRFGFNGPALIQWGHHGAVARPLVEVSGL
                     LALAVSFAAAPQICSDSGLVRGGSVIVAETWRAVDAEDRCRLIAVALMEHLSGLVADR
                     ICDDLRFGLMEACVEGPESLAARIGRALAVVPTCFAADPDAIPGAPPPVWRQAVEQIR
                     EATHPRAMLGLDHLIDPLAATRSLRSSLEHAEVTAFDESGDAVLGGPVALHSDAALFL
                     ARKAGPLGRLGVAIPTPVSPLDLYALTHEVALVSQARIIAVAPGWGFCHRIGPDGEES
                     GNAGWFGMGVGLDEVNDLFGDSEPDA"
     gene            1887..>2311
                     /locus_tag="VHX39_21320"
     CDS             1887..>2311
                     /locus_tag="VHX39_21320"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3993718.1"
                     /translation="MNRKQRRAETKLHQPVAPAASWVARQLANAVQQHQAGRLAEAET
                     LYQQVLARDTGNADALHLLGVVTHQKGRPDLAIDLIRQAIAINPREASFHANLGVAFK
                     ELGRREEAITCYRAAIRLRPQQPEAHNSLGNALAESELL"
BASE COUNT          493 a          731 c          683 g          404 t
ORIGIN      
        1 cggtccgcga aaggctgaag accgatcctg ccgccggtac gagaccacgc cgtttaagcc
       61 acacctcgaa atgcacatcg tggcgcggcg caccacgacg ttcagctccc tggctcgcag
      121 agcccgtgaa tcctgcaagg ccggtttgcc acttttgcag ccacttaggc atcatcgccg
      181 gcaacctttt ttgacgtggc cgtactcaat tcagtttacg gccaaacccg tcacatgcag
      241 gctacgcatc gggttcacta tctccaaata agtcattcac ttcgtcgagc ccgactccca
      301 tgccgaacca accagcattg cccgattcct cgccatccgg cccgatgcga tgacaaaagc
      361 cccagccagg tgcgacagcg ataattcgcg cctggctcac cagggcgact tcgtgagtca
      421 aagcatatag gtccagcggt gagaccggcg tcgggatcgc gacacctagc cggcccagag
      481 ggcctgcctt gcgcgcaaga aacaaagcgg cgtcgctatg cagcgcaacg ggcccgccca
      541 gtacggcgtc gccagattca tcaaaggccg tgacttccgc gtgctccagg ctgctacgga
      601 ggctccgtgt cgcggccaga ggatcgatca gatgatcgag cccgagcatg gctctaggat
      661 gtgtcgcttc acggatttgc tccaccgcct gccgccagac cggaggcgga gcgccgggaa
      721 tagcatcggg atcggcggca aagcaggtcg gcaccaccgc gagcgctctg ccgatacgcg
      781 cggcgagact ctccggacct tcaacgcagg cctccatgag gccaaaccgc agatcgtcgc
      841 aaatcctgtc ggcaaccaga ccgctgagat gttccatgag cgcgacggcg atcaatcggc
      901 aacgatcttc agcgtcaaca gcccgccagg tttccgcaac aatcaccgag ccgccgcgaa
      961 ccagtccgga atcactgcag atttgcggcg ctgcggcaaa gctgacagcc agagccagca
     1021 gaccggacac ctcaacgagt ggacgggcga ccgcgccatg atgaccccat tgaatcagtg
     1081 cagggccgtt gaagccgaac cggaacggca atttgccgac attcggtacg accgatactg
     1141 cctgcggcgg gagatgtttc gggacccgcc gttgcagtgt gacgccgtcc tcggtatgta
     1201 acaaggtaga aacgtccgcg cggccgcgca gcagacgacg tagctgcttt acctcggcct
     1261 gattgaagac ggcggcctcc accggatcgc agaccagcac ttcggtcggg ctgcgcaatg
     1321 ccactgcgcc gccaggcagc agcgtgagct ctgatctata agtctcgcct ggcggcagca
     1381 cgagttcggt tcggctgagc caggcgcgct gctcaatggc agacatctcc gaccacagca
     1441 gattcatgcg ctgaagctga tcaaatccgg cattttgtcg cagatccagg cggttcatct
     1501 gatgtgacgc ctggttgccg tgcggcaacc tcgcatccgg aatggcgtca aggtatgagg
     1561 gagagggttc cgccggccgc gtggcgtcat acgcatgcga taatgacatt accatataca
     1621 cgtacctctg atcgttctga tccgccatca gcattttgcc gatgtgcaat gatgtgccgg
     1681 agcttgttac ggattgccta ccattccacc ggaaagtaaa ttttttgtta ttcgaacaga
     1741 cgcatcgtga cgccggcgat cgttgccaca gaccgtcacg ctttcgactc ggcggggcgt
     1801 gttaggtgag gtgatcgttg cagtccacca cagttgccga agcgacaggg ctggcctgaa
     1861 aaatctggag gcaaggacac cgggccgtga accgcaaaca acgccgagcc gaaacgaagt
     1921 tgcaccagcc ggtggctccg gccgcttcct gggtcgcacg gcaattggcc aacgcggtgc
     1981 aacagcatca ggccggacgt ctggccgaag ccgaaacgtt gtaccagcag gttctggcgc
     2041 gcgacaccgg caatgcggac gcactgcacc tactgggggt tgtcactcac cagaagggac
     2101 gtcccgacct ggcaatcgac ctgatccgtc aggctatcgc gattaatccg cgggaggcgt
     2161 cattccatgc caatctgggg gtcgcattca aagaactggg acgccgagag gaggcgatca
     2221 cgtgctatcg cgccgccatc cgcctcaggc cgcagcagcc ggaggcacac aacagcctgg
     2281 gcaacgcgct ggccgagtct gagctattgg a
//
LOCUS       DATAVD010001119         2597 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2155616, whole genome shotgun sequence.
ACCESSION   DATAVD010001119 DATAVD010000000
VERSION     DATAVD010001119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2597
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2155616"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(325..750)
                     /locus_tag="VHX39_21325"
     CDS             complement(325..750)
                     /locus_tag="VHX39_21325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993719.1"
                     /translation="MTESSHVGSVTGVRRRSVTAMALVGLLAFGGCSPPTEVLDLRNA
                     PQATQDALQRVRIVPLGVPGPAVAGSIGPVSGYGCAPTPEAASVAAEQQIRAKAITQR
                     ATAVIDVLIEPDGTGMCLNGYNMIARGIAVGPRGIPPSY"
     gene            885..1304
                     /locus_tag="VHX39_21330"
     CDS             885..1304
                     /locus_tag="VHX39_21330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993720.1"
                     /translation="MKGVALLLRMAQYELEERRSDLGSINQAQIQTETAIGDLDAKAI
                     HEANIALADPAAIATFGAWSVLAAKGRAQLRNRFEELDVSAHAARDNLRESAAQLRRL
                     EIVLETERTKARRVAVQRADARADERELARRHGNKPD"
     gene            complement(1301..>2597)
                     /locus_tag="VHX39_21335"
     CDS             complement(1301..>2597)
                     /locus_tag="VHX39_21335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993721.1"
                     /translation="AVANLLAKLIRYEDGSLVRGTSTPPWSRMERVLEANRDELDTAV
                     KFSLDHPARLLSEAIRTPLSFMGLQADRSAIRRFLDAIAHPERFRADEPGVMIRRRLV
                     EGRADPARRVPVITLFALCIKALNDTIHSTHSDTYLWTDVNQPGRSGEPFPKLSGYTG
                     LREAAGTNLRTDAQLRLIREAGAAVHDPGVYAMSVETIGPDRAEEYLTANRGNRNIVQ
                     AHVAALARDIRNGQWMFNAQPICFSRSGRLLNGQHRLSAVLEAGQPIEVLVMRGLPEE
                     AFPTYDKQAKKAPALDEMFDDFGDKALISATAVLLWRRELRPEGEPNARPTSSEIRDV
                     IRDHPELMQYRGFARKLVRYGRASALVYAAYRIIRGNPDLGRVFLDRLETAANLPAGH
                     IILRLRDRMIDLRKADQNTQIDEILAAWERFQKRPGIPV"
BASE COUNT          522 a          780 c          775 g          520 t
ORIGIN      
        1 ggcaggttgc ggaacgaacg gcggaatcca attgtttgat tggaggctgc tgactgacac
       61 gatatcggac tcctggctgc ggtgcacccc gaacggcgac cttgatgcct gtggttaacc
      121 gcttgatcat actaaccgaa aagcggttgt gacctggttt cagtttagac atgataccgg
      181 aacgcgaacg accgccatcg aactgagatc cctttgtcgg atcacatatc ctaccggagc
      241 ctgggatgtt cgctcatatc ggcgacgtcg tcactggact tgcattgaag tagttaagtg
      301 ccaggcgaca tcgcaaccgc gtactcagta cgacggagga ataccccttg gcccgacagc
      361 aatgcctcgc gcgatcatat tatagccgtt aaggcacata ccagtaccgt ccggttcgat
      421 cagcacgtcg atcaccgccg tcgcacgttg ggttattgct ttggccctga tctgttgttc
      481 agccgcaaca ctcgcagctt ccggcgtcgg cgcgcaacca tagcctgaga ccggaccgat
      541 cgagccggcc accgctggtc ccggcacgcc aagcggcacg atgcggacgc gctgcagggc
      601 gtcctgtgtc gcttgcggcg cgttgcgcaa atccaaaacc tcggtcggtg gactgcatcc
      661 gccaaacgcc agcagcccga ccagggccat cgctgtgaca ctgcgcctgc gaacacccgt
      721 tacgctcccc acatgagagg actcggtcat gatctccatc gattggccta taacacgccg
      781 aggtttcgcc ctacttgccg ttcgctccgg tatcgatcca aaccttgaaa cagacctgta
      841 agttttgcct ggtagcgtcg ggcggtactc gcaggagttc tggtatgaag ggcgtcgccc
      901 tgttgctgag aatggcgcaa tacgaactgg aggagcgccg gtccgatctg ggatcgatca
      961 accaggcgca aatccagacc gaaacggcga tcggtgatct ggatgcaaaa gcgatccacg
     1021 aagccaatat cgccttggcc gatcccgcgg cgatcgcaac cttcggcgca tggtccgtgc
     1081 tggcggcaaa aggtcgcgcc cagttacgca atcgtttcga agagctggat gtcagtgcac
     1141 atgcggcgcg cgacaatctg cgtgagtcgg cagcgcagct caggcgcctg gaaatcgtgt
     1201 tggaaacaga acggaccaag gcacgccgag tggccgtgca acgggccgac gcgcgggccg
     1261 acgagcgtga gttagcacgc cgccatggca ataaacccga ctaaaccggg atgcccggac
     1321 gtttttgaaa gcgttcccag gccgcaagaa tttcgtcgat ctgggtattc tgatcggcct
     1381 tgcgcaaatc gatcatgcga tcgcgtaacc gcagaatgat gtgtcccgcc ggaaggttgg
     1441 ccgcggtctc cagtcgatcc aggaagaccc ggcccagatc gggattgccg cggatgatcc
     1501 ggtacgcggc gtaaacgagt gccgaggcgc ggccgtatcg taccaatttc cgggcaaacc
     1561 cgcggtattg catcaactcc ggatggtctc tgatgacgtc gcggatttcg gacgacgttg
     1621 gtcgtgcatt cggttctccc tcggggcgca actcgcgtcg ccacaatagc accgctgttg
     1681 ccgagatcag tgccttgtcg ccgaaatcgt cgaacatctc gtccaacgcg ggtgcttttt
     1741 tggcctgttt gtcgtaggtg gggaaggctt cctcgggcag gccacgcatc accagcactt
     1801 cgattggctg accggcttcc aataccgccg acaagcgatg ctggccattc agcagccgtc
     1861 ccgagcggga aaagcaaatc ggctgggcgt tgaacatcca ctggccattg cggatatcac
     1921 gcgccagcgc cgcgacatga gcttgcacga tattccgatt gccccgattg gcggtgaggt
     1981 attcttcggc acggtccggg ccgatcgttt ccacgctcat ggcatagaca ccaggatcat
     2041 gcaccgccgc cccggcttcc ctgatcagtc taagctgagc atcggtgcgt aagttggtcc
     2101 ctgccgcctc acgtaagccg gtgtatccgg agagttttgg gaatggttcg cctgagcgtc
     2161 ccggctgatt gacgtcggtc cataaatagg tgtcgctgtg ggtgctgtgg atcgtatcgt
     2221 tcaaggcttt gatacacaaa gcaaacaatg tgatgactgg aacccgtcgt gccggatcgg
     2281 cccgcccctc aaccagccgg cggcggatca tgacccctgg ttcgtctgcc ctgaagcgtt
     2341 ccgggtgcgc aatcgcatcc aggaagcggc ggatggcgga acggtccgct tgcagaccca
     2401 tgaaactcaa cggagtccgg atcgcctccg acaatagccg cgccggatga tcgaggctga
     2461 atttcactgc ggtatcgagt tcgtcgcggt tggcttccag cacgcgctcc attcggctcc
     2521 acggcggggt cgaggtgcca cggaccaggc tgccatcctc gtaacggatc agcttggcga
     2581 gcaaattcgc cactgcg
//
LOCUS       DATAVD010001120         3674 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1782537, whole genome shotgun sequence.
ACCESSION   DATAVD010001120 DATAVD010000000
VERSION     DATAVD010001120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3674
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1782537"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..722)
                     /locus_tag="VHX39_21340"
     CDS             complement(<1..722)
                     /locus_tag="VHX39_21340"
                     /inference="COORDINATES: protein motif:HMM:NF045433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993722.1"
                     /translation="MTAVQTQHNQRGFALLVVLWTVALLALMGTYLVVAARQRMAMAR
                     DLGTAATLEAAADGAAQYAIFALLKGQWIPDGTTRKVRIGAVNTSVFLEDEALKLNPN
                     YASAADLQALLEQLSVSQRFAATLAAAIVEFRTPGGVQTRGGAATANDNSDRNNQSPG
                     IPFVRLTDLAAVPGMTPDTMQLLQPHLTLFAGSDPDVVPAIGPDGVNAEHVIGIISVA
                     RGPNRAMFTRHIIVRTNARRSGR"
     gene            complement(719..1318)
                     /locus_tag="VHX39_21345"
     CDS             complement(719..1318)
                     /locus_tag="VHX39_21345"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEX3993723.1"
                     /translation="MTRRPNGFTLLELLAAVAILGLVLVILTQGVHFGLLATQSEARI
                     GGENAGLQEIDMALRHLVEATDPGSEDQDQPSLLGSRNMMTLITEIPGLTAPPGARFA
                     AGPVEATLFVDHRHRLMLRWRPVAEASHDERPQSANETELQCCVSRLDLSFWQPTGGW
                     VGGWQSAELPAMVRIHLEFSNQRSRHWPDIVVAPRLDRR"
     gene            complement(1329..1787)
                     /locus_tag="VHX39_21350"
     CDS             complement(1329..1787)
                     /locus_tag="VHX39_21350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudopilin I"
                     /protein_id="HEX3993724.1"
                     /translation="MARCDLTAQHSDASSSDDAGFVLLEVVVAFIIAALSLGVLYQAA
                     LTGLHATRNAARYEQALSRARSRLVIAEHGSPLVAGDVRGDDGGGFHWRLHVTPIDHA
                     TVRPFNPVGLRHDPDFQLTLYAVSVWVSWDDFGTERSVRLDTQQIGQAAR"
     gene            complement(1919..2683)
                     /locus_tag="VHX39_21355"
     CDS             complement(1919..2683)
                     /locus_tag="VHX39_21355"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3993725.1"
                     /translation="MIKSALVTGAGGGLGRAVALALAARECTVVALDINGPAAEETAA
                     EAASGLVTPLVIDLTAPGAADLAVAEALAALGGLDIVVNNAGWGIGEAFLAMTEASWD
                     RTLALNLKAVALICAAAGRHMKARGSGRIVNVTSPASRMALPNYLAYAASKAGVDAVT
                     RAAAVALAPFGVRVNSVAPGMMDTAMQSITERQLAAIDGRDDIAAFLDERTRRIPIGR
                     RTDVETVAGMIVWLALDAPDYITAERLNVSGGLDRD"
     gene            2791..>3674
                     /gene="thrC"
                     /locus_tag="VHX39_21360"
     CDS             2791..>3674
                     /gene="thrC"
                     /locus_tag="VHX39_21360"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014456971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEX3993726.1"
                     /translation="MRYISTRGQAPVRDFAGVLLTGLAEDGGLFMPENWPVFSAADWR
                     AMRSLSYPDLAARVMSPFVGSAIPFDTLTRICHTAYAGFTHPAVAPLVQLETHLFTQE
                     LFHGPTLAFKDMAMQVLGLLFEHVLRERNTRVTIVGATSGDTGSAAIEACAGRDRIDI
                     VILHPHQRTSEVQRRQMTTVLAPNVGNVAIEGTFDDCQDLVKALFADVPFRSEMHLSA
                     VNSINWARIAAQIPYYVAAALALGAPDREVAFAVPTGNFGNILAGWVARRMGLPVARL
                     IVGSNRNDIICRFLQSND"
BASE COUNT          681 a         1202 c         1086 g          705 t
ORIGIN      
        1 cgtcctgatc tgcgcgcatt ggttcgcaca atgatatgtc tggtaaacat tgctcggttt
       61 ggacctcgcg cgacgctaat aattccgatg acatgctcag cattgacgcc atcagggccg
      121 atggccggga caacatcggg atcgctgccg gcgaacaatg tcaggtgcgg ctgcaggagt
      181 tgcattgtgt ctggtgtcat ccccggcact gccgcgaggt cagtgagcct gacaaacgga
      241 atgccgggag attggttgtt gcgatcggaa ttatcattcg ctgttgcggc tccgccacgc
      301 gtttgcacgc cgcccggggt tcgaaattca acgattgcgg ccgcgagggt cgcggcgaac
      361 cgctgactga ccgagagctg ctccaacaaa gcctgcaagt ccgcggccga ggcgtagttc
      421 gggtttagct tgagcgcttc gtcctcgaga aaaacgctgg tattcaccgc gcctatccgt
      481 accttgcggg tggttccgtc cggtatccat tggcctttca acagcgcgaa gatcgcgtac
      541 tgggccgcac cgtctgcggc tgcttccagc gtcgcagcag ttcccagatc gcgcgccatt
      601 gccatacgct gacgtgccgc gacaaccaga tatgttccca tcagagcgag cagtgccacg
      661 gtccacagca ccaccaataa tgcgaagccg cgttgattgt gctgcgtctg cacagcggtc
      721 atcgccggtc caggcgcggc gcaacgacaa tgtccggcca atggcgcgac cgttggttgg
      781 aaaactcaag atggatcctg accatcgccg gcaattcggc agattgccag ccgccgaccc
      841 agccgccggt cggctgccaa aacgataagt ccaaacggga aacacaacat tgcaactcgg
      901 tttcattcgc cgattgcggt ctttcgtcat ggctcgcttc tgccacaggc cgccagcgca
      961 acattaaccg atgccggtga tcaacaaata acgttgcctc gaccggacct gcggcaaacc
     1021 tggcgcccgg cggtgccgtc agccccggta tttccgttat caacgtcatc atgttgcggc
     1081 tgcccaacaa cgacggctga tcctgatcct cggacccggg atcggtggcc tcgaccaaat
     1141 gccgcaaggc catgtcgatt tcctgcaggc cggcattctc gccgccgatt cgcgcctcgg
     1201 attgtgtcgc gagcaagccg aaatgcacgc cctgcgtcaa aatgaccagc accaacccta
     1261 aaattgcaac cgcggcgagc agttcgagca aagtgaagcc gtttggccgc cgggtcatgt
     1321 tcaccgtgct accgcgcagc ctggccaatc tgttgtgtgt cgagccggac ggaccgctcg
     1381 gtgccgaaat cgtcccagga aacccagacg ctgacagcat ataatgtgag ctgaaaatcc
     1441 gggtcatgac gcaggcccac cggattgaat ggacgaaccg tggcgtggtc gatcggagtc
     1501 acgtgcagac gccagtggaa gccgccgccg tcgtcgcctc gcacatcgcc ggcaacgagc
     1561 gggctaccgt gttcagcgat caccaggcga gaacgggcgc gcgacaacgc ctgttcgtat
     1621 cgcgcggcat tccgcgtcgc atgcaacccg gtcagcgccg cctgatacaa aacgccaagc
     1681 gataacgccg caataatgaa agcaacgacg acttcaagca gcacaaagcc cgcatcatcc
     1741 gatgatgatg cgtcactatg ttgtgccgtc aggtcgcacc tcgccatcct atcagttgtc
     1801 ctgatgcccg aaccgcagtc acgcatgcga agagactggt ttcgcgcccg agtcaacccg
     1861 cagcataacg caccggatac cggtgggttc cgctgtccga aaattttttt tgccggactt
     1921 agtcgcgatc cagcccgccg ctcacattca accgttcggc ggtgatgtaa tccggcgcgt
     1981 ccaatgccag ccagacgatc atgcccgcca cagtctccac atcggtcctc cggccgatcg
     2041 ggatccgcct ggtccgttcg tccagaaatg ctgcgatgtc gtcacgcccg tcgatcgcgg
     2101 ccagttgccg ctcggtgatc gactgcatcg cggtgtccat cattcctggc gcgacgctgt
     2161 tcacccgcac gccgaacggc gcaagagcaa ccgccgcggc tcgggtcact gcgtcgacgc
     2221 cggctttact cgctgcgtaa gcgagataat tcggcaacgc catgcgcgag gccggcgagg
     2281 taacattgac gatccggcct gacccgcgcg ccttcatgtg acggccggcg gcggcgcaaa
     2341 tcagcgcaac cgctttcagg ttcagtgcca gggtgcggtc ccagctggct tcggtcatcg
     2401 ccaggaacgc ctcgccaatg ccccaaccgg cgttgttgac cacgatatcc agtccgccaa
     2461 gcgctgccag agcctccgcc actgccaggt ccgcagcgcc cggcgctgtc aggtcgatca
     2521 ccagtggcgt gaccagacct gacgctgcct cggcggcggt ttcctcggcg gcgggaccgt
     2581 tgatgtcgag tgccacgacc gtgcattccc tggcggccaa agccagcgcg accgcgcggc
     2641 ccagtccacc gccggcaccg gtgacgaggg cgcttttgat catggtaggt gttcttgcat
     2701 cgggttggtc ctgtgctgaa agcccagact atcgacggtc cgcactcggc gccattgcgc
     2761 ggtaccgccg gtgggcctta aacgatcgcc atgcgctaca tttccacccg cgggcaggcg
     2821 cctgtccgtg attttgccgg cgtcctgctg accggcctcg ccgaggacgg cggcctgttc
     2881 atgcccgaaa actggccggt gttctccgct gccgactggc gggcgatgcg atcattgtcg
     2941 tatcccgatc tggccgcgcg cgtcatgagc ccgtttgtcg gttcggcgat cccgttcgat
     3001 acgctgactc ggatttgcca cacggcctac gccggcttca cccatccggc ggtggctccg
     3061 ttggtgcaac tggaaaccca tttgttcacg caagaactgt ttcacggccc gacgctcgcc
     3121 ttcaaggaca tggcgatgca ggtattaggc ttgctgttcg agcatgtgct gcgcgaacgc
     3181 aacacgcgcg tcacgatcgt cggcgccacc tcgggcgata ccgggtccgc tgccatcgag
     3241 gcctgcgccg gccgcgatcg catcgacatc gtgatcctgc atccgcacca gcgcaccagc
     3301 gaggtgcagc gccgtcagat gaccaccgtg ctggcaccga atgtcggcaa cgtggcgatc
     3361 gagggcactt tcgacgattg ccaggacctc gtgaaagcct tgttcgcgga tgtcccgttc
     3421 cgttccgaaa tgcacctgtc cgccgtcaac tccatcaact gggctcgtat cgcggcgcaa
     3481 attccttact acgtcgccgc cgcgctggcg ctgggtgcac cggaccggga ggtcgccttt
     3541 gccgttccca ccggcaattt cggcaatatc ctcgccggtt gggtggcgcg gcggatgggg
     3601 ttgccggtgg cgcgactgat cgtcgggtcg aaccgcaacg acattatttg ccggttcctg
     3661 caaagtaacg atat
//
LOCUS       DATAVD010001121         1867 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2339849, whole genome shotgun sequence.
ACCESSION   DATAVD010001121 DATAVD010000000
VERSION     DATAVD010001121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1867
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2339849"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..477)
                     /locus_tag="VHX39_21365"
     CDS             complement(58..477)
                     /locus_tag="VHX39_21365"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX3993727.1"
                     /translation="MADVSTFEDVNLPAEAVWSVIGDFAGIRKWAVLVQSESVEDTPA
                     GKVRTLVMPENRVVKERLAAQSQYSYTYTMLDRPEMADYRSTVAVIPLDPTHSRIELI
                     MHLSASAGQTDEDITARYTRNLRGNLRAMKKALGLPI"
     gene            585..>1867
                     /locus_tag="VHX39_21370"
     CDS             585..>1867
                     /locus_tag="VHX39_21370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEX3993728.1"
                     /translation="MIRLPEPKPDVLAKRDAVIAGLRAAVVDEEGVIADPISLKPYET
                     DGLSAYRQMPLAVALPSTTEEVAAIMRFCHANGVRVVPRGAGTSLSGGALPMADAVVV
                     GLMRMNQILDINYPDRCATVQAGVTNIGITNAVSDEGFFYAPDPSSQLACMIGGNVNM
                     NSGGAHCLKYGVTSNNLLGLRIVTVDGEILDIGGEHLDAAGYDWLGLLTGSEGQLALV
                     TEITVRILRSPEGARAMLAGFSSNEIAGECVDAIISSGIIPVALEFMDRPAIHACEAF
                     AHAGYPLDAEAMLIIEVEGSVAEQDDLLARLSTICNRYNPMSMRVSQSPEESLAIWKG
                     RKGAFGAIGRISPDYLCMDGVIPTSQLPNVLRRIEQMSDSYGLKVANIFHAGDGNLHP
                     LIMFNANDPDSFHAAETFGADILKLCVDVGGCLTG"
BASE COUNT          344 a          559 c          595 g          369 t
ORIGIN      
        1 aggctctggt gcgcacggtg gaacgcaaag gtgccgactt ccgccgctga cccggtttca
       61 gatcggtaac ccgagcgcct tcttcatcgc ccgcaaattg ccgcgcaggt tgcgcgtgta
      121 gcgggcggtg atgtcctcgt cggtctggcc cgccgaggcg ctcagatgca tgatcagctc
      181 gatgcgcgaa tgcgtcgggt ccagcggaat gacggccacg gtcgaacggt agtccgccat
      241 ctccggccgg tcgagcatcg tgtaggtgta tgaatactgc gattgagcag ccaaccgctc
      301 cttcaccacc cggttttccg gcatgaccag cgtgcggacc ttgccggcag gcgtatcttc
      361 cactgactcg ctttgcacca ggacggccca tttgcgaatg ccggcaaagt cgccgatcac
      421 actccaaacg gcctcagcgg gcaggttgac gtcctcgaag gtggacacat cggccatggc
      481 gggttcctcc tggttggccg ggattaaagg cgcgcgaccc gacacgcgca agaacgcttg
      541 ctccagccgg gttgacgccc catcatcaag actggaggcc tatcatgatc agactgccgg
      601 agccgaaacc cgatgtgctg gcgaaacgcg acgcggtgat cgccggactg cgggcagcgg
      661 tcgtcgatga ggaaggggtc atcgccgatc cgatcagcct gaagccgtac gagaccgacg
      721 ggttgtccgc ctatcgccaa atgccgctcg ctgtcgcgct gccgtcgacc accgaggaag
      781 tcgctgccat catgcggttc tgccatgcca acggggttcg cgtggtgccg cgcggcgcgg
      841 gaacctcgct gtccggtggc gcattgccga tggccgatgc cgtggttgtc gggctgatgc
      901 ggatgaacca gatccttgac atcaactacc ccgatcgttg cgcgaccgtg caggccggcg
      961 tgaccaatat cggcattacc aacgcggtgt cggacgaagg gtttttctat gcgccggatc
     1021 cctcgagcca gctcgcctgc atgatcggcg gcaacgtcaa catgaattcg ggcggcgcgc
     1081 attgtctgaa atacggagtc acctccaaca atttgttggg tcttaggatc gttacggtcg
     1141 atggcgagat cctcgacatc ggcggcgagc atctggacgc tgcgggttat gactggttgg
     1201 gcttgctgac cggcagtgaa ggacaactcg cactggtgac cgagatcacc gtgcgcatcc
     1261 tgcgttcgcc cgagggtgct cgtgccatgc tcgccgggtt ttcctcgaac gaaatcgccg
     1321 gcgaatgtgt cgatgccatt atttcgtccg gcatcattcc ggtggcgctg gagttcatgg
     1381 acaggcccgc catccacgcc tgtgaggcgt tcgcccatgc cggttatccg ctcgacgccg
     1441 aggcgatgct gatcatcgaa gtcgagggca gcgtcgccga gcaggacgat ctgttggcgc
     1501 ggctgagcac gatctgcaac cgatacaatc caatgagcat gagggtgtcg cagtcgccgg
     1561 aagagtcgct ggcgatctgg aaaggccgca agggtgcgtt cggggcgatc ggccggatca
     1621 gtccggacta tttgtgcatg gatggcgtga tcccgaccag ccaattgccg aatgtgctgc
     1681 gccgaattga gcaaatgtcg gacagctatg gattgaaggt cgcgaacatc tttcacgccg
     1741 gcgatggcaa tttgcatccc ttgatcatgt tcaacgccaa cgacccggac agtttccacg
     1801 ccgccgaaac gtttggcgcg gatattctga aactctgcgt cgatgtcggc ggttgcctga
     1861 ccggcga
//
LOCUS       DATAVD010001122         2342 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_294143, whole genome shotgun sequence.
ACCESSION   DATAVD010001122 DATAVD010000000
VERSION     DATAVD010001122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2342
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294143"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..119
                     /locus_tag="VHX39_21375"
     CDS             <1..119
                     /locus_tag="VHX39_21375"
                     /inference="COORDINATES: protein motif:HMM:NF019543.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993729.1"
                     /translation="HTPPGDWTLAFRRTAAGRVNGVEVGCWLARRLEYARVE"
     gene            complement(141..722)
                     /locus_tag="VHX39_21380"
     CDS             complement(141..722)
                     /locus_tag="VHX39_21380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993730.1"
                     /translation="MTVADPNRIILTGENPFIRLSETDGAAFSTNASFWRIITSGGGP
                     GHVLYIKSELTEDRWRIYSDNIAMARWLQRTVQGVLNAELKDLSIPVTEAVFSKSGDP
                     RDHWTETAETLDESVSLTWYDIGEPMLIHTYPNVGPDARPYGVSSVLIPALGAQVTRN
                     GVLAKGTPFPRIREGRPFSNCALAFCESWTEPK"
     gene            complement(783..2132)
                     /locus_tag="VHX39_21385"
     CDS             complement(783..2132)
                     /locus_tag="VHX39_21385"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX3993731.1"
                     /translation="MAQQIEDLAAFVAAARYEDVPIAVRDHTKLVLLDTLGVILAGSE
                     RPEVQQLRDRLSGGTGATVYARGWPVQDPRTAALLNGIAGRSIELCEGLRFVSGQAAM
                     QVLPGVLAVAEQAGTSGRELLMALLLGYDVAARLAGGFTPRPLAHQNGQVPLVAAAAA
                     GARLRGLDAGGISRAMRIATTLVLTPSYTNAVAGATALNVAGGMSGFAASLAPDLALA
                     GFEAQSDAIELALGQLVGAGFTTDGMLNELGSTWHITQNYFRLYACCNPIHPALDCLA
                     LALAELQPRPEQIARIDCVTYRFASVMRDPNPLNYFASKYSLPHAAATMAVRGSAGFA
                     ALDDTAVHDPVIAALRKRVTVTEDPAMTSLVPQLKPARVTVTLNDGRQATHACDSHRG
                     DFQAPFTTAELLEKFRELACVVLTAEGAALVEQSVDRCEEWDNVQVLTALCRHHGRM"
     gene            complement(2163..>2342)
                     /locus_tag="VHX39_21390"
     CDS             complement(2163..>2342)
                     /locus_tag="VHX39_21390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993732.1"
                     /translation="PPTTSTSNNSAAESPVISTSGTQSSGMTIPETPFWGVSHVWATW
                     SIRLWHIPTLAAPDL"
BASE COUNT          438 a          762 c          712 g          430 t
ORIGIN      
        1 atcatacgcc gcccggggat tggaccctgg catttcggcg aacggcagcg ggacgggtca
       61 atggcgttga ggtcggttgc tggctggcgc gacggctgga gtatgcacgg gtcgaatgac
      121 gtttcgatcg ctgccccgtc ctactttggt tccgtccaac tctcgcagaa cgccagcgca
      181 cagttgctga acggccgacc ctcgcgtatc cgcgggaacg gtgtaccctt cgccagcact
      241 ccatttcgtg tcacctgggc tcccaaagcc ggaatcagca cggaactcac cccatacgga
      301 cgggcatccg gcccgacatt cggataagtg tggatcagca tcggttcgcc aatgtcatac
      361 cacgtgaggc tgaccgactc atccaacgtc tccgccgttt cggtccagtg atcgcgcgga
      421 tcgccggact tgctgaacac tgcctcggtt accggaatgg acaaatcctt caactcggca
      481 ttcaacacgc cctgcacggt gcgttgcagc cagcgcgcca tcgcgatgtt gtcggagtag
      541 atgcgccacc ggtcctcggt cagttcgctt ttgatataaa gcacgtggcc tggcccgccg
      601 ccggaggtga tgatccgcca gaagctggca ttggtggaga acgccgcccc atccgtctcg
      661 ctgaggcgga tgaacggatt ttcgccggtc aggatgatac ggttcgggtc tgcgactgtc
      721 atgttgagta cctcccggat ggagtgtgcc tacggtccgc cggatcgcgc aactcgtccc
      781 agtcacattc gcccgtggtg gcggcaaagc gcagtcagta cctggacatt gtcccattcc
      841 tcacaacgat cgacggactg ttcgaccagc gccgcacctt ctgccgtcag cacgacacaa
      901 gccagttcgc ggaatttttc cagcagctcc gctgtcgtga acggtgcctg gaaatcgccg
      961 cggtggctgt cgcacgcatg cgtggcctgc cgtccatcgt ttagcgtcac ggtcacccgc
     1021 gccggcttca actgcggcac cagcgaggtc atcgccggat cctcggtcac cgtcacgcgc
     1081 tttcgcagcg cagcgatgac cggatcatgc accgcggtat cgtcgagcgc agcgaatccg
     1141 gcactccccc gcaccgccat cgtcgccgcg gcatgcggca atgagtactt tgacgcaaaa
     1201 tagttcaacg ggttcggatc gcgcatcacc gaggcaaacc gatacgtcac gcaatcgatc
     1261 cgagcgatct gttcaggccg tggctgcaac tctgccaatg ccagcgccag acaatcaagc
     1321 gccggatgga tcggattgca gcacgcgtac aagcgaaaat aattctgcgt aatatgccag
     1381 gtcgagccaa gctcattcag catcccatcg gtggtaaacc cggcgccgac caattggcca
     1441 agtgccagtt caatcgcatc gctctgcgcc tcgaacccgg cgagcgccag atcgggcgcc
     1501 agcgaggcag cgaacccgct catgccgccg gcaacattca gcgccgtcgc accggccacg
     1561 gcgttggtgt agctgggtgt caggaccaat gtcgttgcga tgcgcatcgc ccgggaaatc
     1621 ccccccgcgt cgaggccgcg cagtcgggcg cctgccgcgg cggccgctac cagcggtacc
     1681 tgaccgttct gatgagccaa cggtcgcggg gtgaacccac cggcgaggcg ggctgccacg
     1741 tcatagccaa gcagcaacgc catcagcagc tcgcgaccgg aggtaccggc ttgctcggcc
     1801 acggcaagca caccaggcag tacttgcatt gctgcctgac ccgaaacgaa acgcagacct
     1861 tcgcacaact cgatcgaccg tccggcgatg ccgttcagca acgctgcggt gcgcggatcc
     1921 tgaactggcc agccacgcgc gtagaccgtt gcgccggtcc cgcctgacag gcggtcgcgc
     1981 agttgctgca cctcgggccg ctcgctgccg gccaggatga cgcccagagt gtcgagcaac
     2041 acgagtttcg tgtggtctcg cacggcaatc ggcacgtcct cataacgtgc ggcagcgacg
     2101 aatgccgcaa ggtcttcgat ctgctgtgcc acggcgtgct cctcggttgc gtgcgttgcc
     2161 agtcataggt ccggggcagc gagcgtggga atatgccata gccggatcga ccaggttgcc
     2221 cagacgtgtg agacacccca aaatggcgtc tcaggaatgg tcatgccgga ggattgcgtg
     2281 ccagaggtgg atatcacggg gctctctgcc gccgaattgt ttgacgtgct tgtggtcggt
     2341 gg
//
LOCUS       DATAVD010001123         2245 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_668357, whole genome shotgun sequence.
ACCESSION   DATAVD010001123 DATAVD010000000
VERSION     DATAVD010001123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_668357"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..248
                     /locus_tag="VHX39_21395"
     CDS             <1..248
                     /locus_tag="VHX39_21395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993733.1"
                     /translation="RYEEALRALIHDKQAGGAAEVTAPPPRDDNVIDLMEALRRSLEK
                     SGKAEPARKPQAKAKRQPVVQKRAVAKRGSDKRAAAR"
     gene            245..>2245
                     /gene="ligD"
                     /locus_tag="VHX39_21400"
     CDS             245..>2245
                     /gene="ligD"
                     /locus_tag="VHX39_21400"
                     /inference="COORDINATES: protein motif:HMM:TIGR02779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HEX3993734.1"
                     /translation="MTRSPATLTRYREKRDFSRTPEPAGKVHRPGQALSFVVQRHAAR
                     RLHYDLRLEWHGVMKSWAVTRGPSLDPADKRLAVEVEDHPIDYNSFEGTIPKPDYGGG
                     TVQIWDRGTWAPLDPDTVDKDLTKGELKFVLAGERLNGGFVLVRMKPRRGESDKHHNW
                     LLIKERDSAATPGAGDAVLHADTSVVSGRTMDEIAEAAGEGEATEKPRSAKRSAGTKR
                     VRATTTGKVGATRTGKAGATKTGKAGATTTGKKSAASRSASAKAAAVSAEVRRTAPEK
                     TRSRSTAIPRFIAPQLCKLMDTPPTGTTWVHELKLDGYRLQLRVEAGQPVLRTRTGLD
                     WTERFPSIAKAAAALPDCLMDGEVVALDAKGHPSFAALQATLAGEQDAPIVYFVFDLL
                     HDGHRDLRNEPLETRKRLLQPMVPEGETVLRYLDHFAGPGAAVLGSACELGMEGVVSK
                     RLDGRYVSGRGDGWTKAKCRGRDEFLIGGWTRDKKGRGLGALLVGAHRDGQFVYLGRV
                     GTGFSAALSDDLVRRLTPLRTSTSPFIGRQPARTSDVNWASPQLVAEVAYGGWTEAEG
                     LLRHPSFLGLREDKPAAEVTSPDAPAKPEADPPAKSASRSADPPAKRSGSLTISHPDR
                     VLWPATKSTQAVTKADLAAYYAKFADRILEYIGGRPLTVARAP"
BASE COUNT          457 a          687 c          742 g          359 t
ORIGIN      
        1 atcgttatga agaagcacta cgcgcgttga tccacgacaa gcaggctgga ggggctgccg
       61 aagtgaccgc tccgccgccg cgggatgaca atgtgatcga cctgatggaa gcgctgcgtc
      121 gcagcctgga gaaatcaggc aaagcggagc ccgcccggaa accgcaggcc aaagcgaagc
      181 ggcagcccgt ggtgcaaaag cgggcggtcg cgaaacgtgg ttcggacaaa cgggcggccg
      241 cgcgatgacc cgctcgccgg ccacattgac gcgatatcgc gaaaagcgtg acttttcccg
      301 aacacccgag ccggctggta aagttcacag gccaggacag gcgctttcgt tcgtggtgca
      361 acgtcacgcc gcacggcggc tgcactacga cctgcgcctc gaatggcatg gcgtcatgaa
      421 atcatgggcg gtcacccgtg gcccctcgct cgatcccgcc gacaagcggc tggctgtcga
      481 ggtcgaggat cacccaatcg actataactc attcgaaggc accattccga agcccgacta
      541 cggcggaggc accgtgcaaa tctgggaccg cggcacctgg gcgccgctgg accccgatac
      601 ggtcgacaag gaccttacca aaggcgaatt gaaattcgta ttggctgggg aacgattgaa
      661 cggaggcttt gttctggtgc ggatgaagcc gcgccgcggc gagtcggata agcaccacaa
      721 ttggctattg atcaaggaac gcgacagcgc agcgacgcct ggcgcgggag atgcagtgct
      781 gcacgccgat acatcggtgg tcagcggccg gaccatggac gagattgccg aggcagcagg
      841 ggagggggag gcgactgaga aacctcgatc cgcaaagcga tccgccggca ctaaacgcgt
      901 ccgcgcaacc acgactggta aagtcggcgc aacaagaact ggtaaggccg gcgctacgaa
      961 gaccggcaag gccggcgcaa cgaccactgg taagaagtct gccgccagcc gtagcgcctc
     1021 ggccaaagcc gccgccgtat ccgcggaggt gagacgaacg gcgcccgaga aaacccgatc
     1081 gcgcagtact gcaatcccgc gcttcattgc gcctcagttg tgcaagctaa tggacacgcc
     1141 gcccaccggt accacctggg tgcacgaact gaagctggat gggtatcgcc tgcagcttcg
     1201 ggtcgaagcc ggccagcccg tgctgcgcac ccgcaccggg ctggactgga ccgagcggtt
     1261 tccctcgatc gccaaggccg ctgccgcgtt gcctgactgc ctgatggacg gtgaggtcgt
     1321 cgcgctcgac gccaaaggcc atccgagctt tgccgcattg caggcaaccc tcgccggcga
     1381 gcaagacgcg cccatcgtgt atttcgtgtt cgatctgctg cacgacggcc atcgcgactt
     1441 gcgtaacgaa ccgctcgaaa cccgcaagcg tttgttgcag ccgatggtcc ctgaaggcga
     1501 aacagtgttg cgttacctgg atcatttcgc cggcccagga gcggcagtgc tggggtcggc
     1561 gtgtgaactg gggatggaag gagtcgtctc gaagcggctc gatgggcgct acgtgtcggg
     1621 ccgaggcgac ggctggacaa aggcaaagtg tcgcggtcgc gacgaattcc tgattggcgg
     1681 ctggaccagg gacaaaaaag gccgcggcct gggcgcgctg ctggttggtg cgcatcggga
     1741 tggccaattt gtctatttgg gccgggtcgg caccgggttc tcggcagcgt tgagcgatga
     1801 tctggtgcgt cggttaacgc cgttacgaac gtcaacgtcg cccttcatcg gacgccagcc
     1861 cgcgcgcacc tctgacgtca attgggcttc gccgcaattg gtcgcggagg ttgcctatgg
     1921 cggctggacc gaagccgagg gcctgctgcg tcatcccagc tttctgggcc tgcgggaaga
     1981 caaaccggcg gcggaggtca cgtcccccga tgcgccggca aagcccgagg ccgatccacc
     2041 tgcaaaatct gcctcaaggt cagcggatcc gccagcaaaa cggtcaggtt cgctgaccat
     2101 cagccatccg gaccgtgtgc tgtggccggc aacgaaatcg acgcaggcgg tcaccaaagc
     2161 agacctcgcc gcgtattacg cgaaatttgc cgatcggatt ttggagtata tcgggggcag
     2221 gccgctgacc gtcgcgcggg cgccc
//
LOCUS       DATAVD010001124         3181 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_668428, whole genome shotgun sequence.
ACCESSION   DATAVD010001124 DATAVD010000000
VERSION     DATAVD010001124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3181
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_668428"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1150)
                     /locus_tag="VHX39_21405"
     CDS             complement(<1..1150)
                     /locus_tag="VHX39_21405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3993735.1"
                     /translation="MTSGAATLITSPRYLSSSASVRVTRVSRHWAGVTALDNVSINVQ
                     PGSFTVLLGPSGCGKTTCLRIIAGLETASSGTVEIGGRDVTNLPPAGRGVAMVFQSYA
                     LFPHLTVAENIVFGLKARRVPPAERARRLDRVVEILGVGALLQRKPAQLSGGQQQRVA
                     LGRAIVAEAPVCLMDEPLSNLDAQLRADMRREILALQRRLGITMLYVTHDQTEAMSMA
                     DQIVLLRDGHIEQDAPPEELYQSPATTFAASFIGTPPMNLFPLERRGADLVLRGTDGP
                     VLAGALADPAIGGIRPEHLRLAETGIQAVVRDTEYLGADTVMTCVAGASTLLVRLPGR
                     VILPKGTPVCLALDEPVHLFDAVTGRRAGLRGTRPSDAIAACVPLKGEM"
     gene            complement(1284..2675)
                     /locus_tag="VHX39_21410"
     CDS             complement(1284..2675)
                     /locus_tag="VHX39_21410"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3993736.1"
                     /translation="MAEASSGETTIHGHIAARIDRLPLTRVQWHLAILIEITWGFIIV
                     DTDGIGARLFPFVWRPNKIISVDQYAVIQALQVGLGILLGAYLMSWIAGKYGRRPAIL
                     ASALLAGVCLWPFAFVTDFWGLVVLSVLSTLGCGGIIATHAVYLSEVIGPNVRSKVLL
                     ASQSSTAIVGVGISLLAFYWIPLHWQWFVWAGAIFQVFVLLPLLYFLLPESPRWLEAN
                     GHSEDAERMMTDLERRVQLAYGAPLPEPDHGQHPVLMSDKSAWLELFSNRRYRGRIIL
                     ILVCWLCCYPGLIYGVGAFIPTYMVDHGVSSHFVFGTFIAAYLATFVAFQINSRLGEG
                     LERRDTMFVLCIVFAVAWAVAYLYPLPMVMATCVVIGRICTTLVLFNLYNYTAVSFPT
                     RIRSVAFAWTDGLGHLGAWAGVTLTGPLYQLGPNHLGWLLFIIIPGALLPAALIRGFG
                     IRQSRAVLEQVST"
     gene            2807..>3181
                     /locus_tag="VHX39_21415"
     CDS             2807..>3181
                     /locus_tag="VHX39_21415"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX3993737.1"
                     /translation="MARVPYLSKSDLAEADQELLNRPISLNKALVNSPKAARAFSGLG
                     GFIRYGSKLDPRLRELAILQVGWLARSPYEWSHHVKIGHDFGVSDEDVQALIDDTAGK
                     PVSLDALTMGVLKAAREITNGGA"
BASE COUNT          681 a          982 c          978 g          540 t
ORIGIN      
        1 gcatttctcc cttcaatgga acgcacgcag caatcgcgtc gctgggcctt gtcccccgta
       61 gcccggcgcg ccgcccggtc accgcgtcga acaaatgcac tggctcatcc aacgcgaggc
      121 aaaccggtgt gcccttcggc aatatgaccc gacccggcag acggaccagc aacgttgacg
      181 caccggccac gcaggtcata accgtgtcgg caccaagata ttccgtatca cgaacgaccg
      241 cctgtatgcc ggtttccgca agccgcaaat gttccgggcg aatgccaccg atcgctgggt
      301 ccgccaaagc gccggccagc accggcccat cggtgccgcg caacacgagg tcagcgccgc
      361 gccgttccaa cggaaacaag ttcatcggcg gcgtgccgat gaagctggcc gcgaaagtgg
      421 tagcgggcga ctgataaagt tcctcgggcg gcgcatcctg ttcgatatga ccgtcgcgca
      481 gcaggacgat ctggtcggcc atgctcattg cctcggtctg gtcgtgggtg acgtacagca
      541 tcgtgatacc cagacgtcgt tgcagtgcca gaatttcccg ccgcatgtca gcccgcaact
      601 gagcgtcgag gttcgataat ggttcgtcca tcaggcacac cggcgcctcg gcgacgatgg
      661 ctcggcccaa tgcgacacgt tgctgttgac cgccggagag ttgggcgggt ttgcgttgca
      721 gtagcgcacc gacgcccagg atctcgacca cgcgatccag tcgccgggct cgttccgctg
      781 gcggcactct gcgcgctttc aggccgaaca cgatgttctc tgccacggtc agatgcggga
      841 acaaggcgta ggattgaaac accatggcga cgccgcggcc cgcaggcggc aggtttgtca
      901 catcgcggcc acctatttcg acggttccgc tgctcgcagt ttccaggccg gcgatgatcc
      961 gaaggcaggt ggttttgccg cagccggacg ggccgagcaa caccgtgaag ctgcctggct
     1021 gaacattgat cgagacattg tccagtgctg tcacacccgc ccagtggcgg ctgacccggg
     1081 tcactcgcac cgaggcggag gaactcagat atcgcggcga ggtgatgagt gtggctgcgc
     1141 cgctggtcat tgtccggtgt atattgaagc ccgctgcatc ctatacacgg tgcccgcaac
     1201 cgggcaaagc cggcacggat tgggaaactt ccgcgattcc gcctggcaaa gtgcgaaatt
     1261 ggatgacagt ttggtgacag tcgctaggtc gacacctgtt ccagcactgc ccggctttgc
     1321 ctgatgccaa atccgcgaat cagcgccgcc ggcagcaacg cacccgggat gataatgaac
     1381 agcagccacc ccaaatggtt cggcccaagc tggtacagcg gtccggtcag ggtcacccca
     1441 gcccatgcgc caagatggcc gagaccgtcg gtccaggcga aggcaaccga gcggatgcgc
     1501 gtcgggaacg acacggcggt gtaattatac agattgaaca gaacgagtgt cgtgcaaatg
     1561 cggccgatga caacacaggt cgccatgacc atcggcaatg gatacagata cgctaccgcc
     1621 catgcgacgg cgaatacgat gcacaaaacg aacatcgtgt cgcgacgctc caggccctca
     1681 cccagacggg agttgatctg gaaggcgacg aacgtcgcga gatacgcggc aatgaaggtg
     1741 ccgaacacga aatgcgacga cacgccgtgg tccaccatgt aggtcgggat gaaggcaccc
     1801 acgccgtaaa tcagacccgg gtagcaacac agccaacaaa ccaggatcaa gatgatccgg
     1861 ccgcgataac gccggttgga aaatagctcg agccaggcgg atttatcgga catcagcacc
     1921 ggatgttgac cgtgatccgg ctccggcagc ggtgcgccgt acgcaagttg cacgcggcgt
     1981 tccagatcgg tcatcattcg ctcggcgtct tcgctgtgac cgttggcttc cagccagcgc
     2041 ggcgactccg gcagcaggaa atacaacagc ggcaacagca cgaaaacctg gaatatcgca
     2101 ccagcccaga cgaaccattg ccagtgcaac gggatccagt agaacgccaa aagactgatg
     2161 ccgacaccga cgatggcggt gctgctctgc gaggccaaca gcaccttgct gcgtacgttc
     2221 ggaccgatga cttctgacaa atacaccgcg tgggtggcga tgatgccgcc gcagccaagc
     2281 gtgctcaaaa cggacagcac gacgagtccc cagaagtccg tgacgaaggc gaacggccac
     2341 aggcacacgc cggccaacaa cgccgaggcc aatatcgctg gccggcggcc atacttgccg
     2401 gcgatccaac tcatcagata ggcgccgagc agaatgccga gcccgacctg cagcgcctgg
     2461 atcaccgcat attgatcgac actgatgatc ttgttggggc gccagacgaa aggaaacagc
     2521 cttgcgccga tcccgtcggt gtcgacgatg atgaaccccc aggtgatctc gatcaggata
     2581 gccaggtgcc actgcacccg cgtcaatggc aggcgatcga tccgcgcggc gatgtgacca
     2641 tgaatggttg tctcgccgga acttgcttcc gccattttcg tgtccgcccc ctgttgagtt
     2701 gacgaaccgt gggcaaccgc gccagcggtg tcaattccgg ggcgctctgg accgaaggtc
     2761 gcctcgcggc caggatgccg gtgacaaaca gttggagcga attgccatgg cccgcgtccc
     2821 ttacctcagc aaatccgatc tggccgaggc cgatcaggaa ctgctcaacc ggccgatttc
     2881 actgaacaag gcgctggtga attcgcccaa ggcagcacgg gcgttttccg gcctgggtgg
     2941 gttcatccgt tatggcagca agctcgatcc tcgcttgcgg gagttggcca ttctgcaagt
     3001 gggctggctg gcgcgctcgc catacgagtg gtcgcatcac gtcaagatcg ggcacgattt
     3061 tggggtcagc gatgaagatg ttcaggcgtt gatcgacgat accgcgggga agccggtctc
     3121 gttggatgcg ctgacaatgg gtgtgctgaa ggcggcacgg gagatcacca acggcggggc
     3181 a
//
LOCUS       DATAVD010001125         1802 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1598758, whole genome shotgun sequence.
ACCESSION   DATAVD010001125 DATAVD010000000
VERSION     DATAVD010001125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1802
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1598758"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..820)
                     /locus_tag="VHX39_21420"
     CDS             complement(<1..820)
                     /locus_tag="VHX39_21420"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3993738.1"
                     /translation="MSQSRQTEINAPNLWRLETPGHQGWQRTARAGDPNKYFMVSTDS
                     HANEPADLWVARIDAKYKERVPRIITDEQGVQWRYCEGYRPDRVRVMSFEGEDWLRQQ
                     SGADVQERIRDNRGDGVDVEIIFPNKGLAMWATPDPVFANAQCKVWNEWAWEQYGAFP
                     GEMLPCAAIATGDLDGAMAEIARVAKVGFRGLTLPCKPIWGGHDVDHVNYNLPHFDKM
                     WTLIQEADLPITFHVSTGRDPRAARGNGGAIINYVTHSLSPTIEPVANLCASGVL"
     gene            918..1721
                     /locus_tag="VHX39_21425"
     CDS             918..1721
                     /locus_tag="VHX39_21425"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3993739.1"
                     /translation="MTEDVSLFGLTGKKALIVGGGQGMGEASARFLARAGCDVALVDV
                     VAERAEQVAGMLTGLGTKAAVVIGDVLDDAQIPRIVAEAEEKLGGIDRMISIVGAAAW
                     GSLLETSAAVWDQQMHLNLRYFFLIAKEGAGVMIRRGSGGRIVGIASVDGQRASPMRG
                     AYGAAKAGLISIVQTMAVEWAPHHISVNAIAPGHIVTPRLFDTPRRVEGYANSLIPLR
                     RRGTTDDIGKAALFLLSDLAGYVNGTTIDVDGGLLAQNMFPQGLPASNG"
BASE COUNT          325 a          560 c          568 g          349 t
ORIGIN      
        1 cgagcacgcc agaggcgcac agattggcca ccggctcgat ggtcggcgac aacgaatggg
       61 tcacgtagtt gattattgcg ccgccattgc cgcgtgccgc ccgaggatcg cggccggtgg
      121 aaacgtggaa cgtgatcggc agatcggctt cctggatcag cgtccacatc ttgtcgaagt
      181 gcggcaggtt gtaattgacg tgatcgacat catgcccgcc ccagatcggc ttgcacggca
      241 gcgtcaaccc gcggaaccca accttcgcca cccgggcaat ttccgccatt gccccatcga
      301 gatcgccggt ggcgatcgcc gcgcaaggca gcatctcccc agggaacgcg ccatattgct
      361 cccacgccca ttcgttccac accttgcact gcgcgttggc gaacaccgga tccggcgtcg
      421 cccacatcgc gagacctttg ttcgggaaaa tgatctcgac atcgacgccg tcgccgcggt
      481 tgtcgcgaat gcgttcctgc acgtcggcgc cggattgttg ccgcagccag tcctcaccct
      541 caaaactcat gacgcggacg cgatcggggc ggtagccctc gcaatagcgc cattgcacgc
      601 cttgctcgtc ggtgatgatg cggggcacac gctccttata tttggcgtcg atccgggcga
      661 cccacagatc ggccggctca ttggcgtgcg agtcggtgga gaccatgaag tatttgttcg
      721 ggtcccccgc gcgcgcggtg cgctgccagc cctggtggcc aggggtttcg agacgccaca
      781 gattgggcgc attgatttcg gtttgccgcg actggctcat ggatcaccct cgttactgac
      841 aacgccgaaa ttctaccgtc cggtagatcg actgtcgata gtggtgtatg gacgccaacg
      901 ttgagcggag gaaactcatg accgaagacg tgtcgctgtt tggcctgacc ggcaagaagg
      961 cgctgatcgt cggcggcggc cagggcatgg gtgaggcctc agcccggttt cttgcgcgcg
     1021 ccggctgcga tgtcgcactg gtcgatgtgg tagcggaacg ggctgagcag gtcgccggga
     1081 tgctcacagg tcttggcacc aaagccgctg tcgtcatcgg cgatgtgctg gacgatgcac
     1141 aaatcccccg tatcgttgcc gaggccgagg aaaaacttgg cggtatcgac cggatgatct
     1201 ccatcgtcgg cgcggctgcc tggggttcct tgctggaaac ctcggcggct gtgtgggacc
     1261 agcagatgca cctcaatttg cgttactttt tcctgatcgc caaagaaggc gccggcgtca
     1321 tgataagacg cggcagcggt gggcggattg tcggcatcgc ctcggtcgat ggccagcgcg
     1381 ccagtccgat gcgcggtgct tacggggccg caaaagctgg cttgatcagc atcgtccaga
     1441 ccatggccgt cgagtgggcg ccgcatcaca tcagcgtcaa tgccattgcc cccggccaca
     1501 tcgtcacgcc gcgtttgttc gatacgccgc gccgggtcga gggttacgcc aacagcctga
     1561 tcccgctgcg ccgccgcggc acaacggatg atatcggcaa ggcggcgctg ttcctgttgt
     1621 ccgacctcgc aggttacgtg aacggcacga caatcgacgt cgacggcggg ttgctggcgc
     1681 agaacatgtt tccgcaggga ttgccggcca gcaacggatg attccgaaat ggccagtggc
     1741 tgccgtgccc ataacgcgac actaaacccg gcggaggcat tccaccatga acttcgattt
     1801 ct
//
LOCUS       DATAVD010001126         4940 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1783659, whole genome shotgun sequence.
ACCESSION   DATAVD010001126 DATAVD010000000
VERSION     DATAVD010001126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4940
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1783659"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..273)
                     /locus_tag="VHX39_21430"
     CDS             complement(<1..273)
                     /locus_tag="VHX39_21430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993740.1"
                     /translation="MIPALPELRFLQIPAAARSRYLGDRFSYMEAGAVDAPVLLLLHG
                     VGANSMHWRYQFAALSEKFRVIAWNAPGYMLSDNLVTEAPEGQDYAA"
     gene            complement(270..1064)
                     /locus_tag="VHX39_21435"
     CDS             complement(270..1064)
                     /locus_tag="VHX39_21435"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEX3993741.1"
                     /translation="MPRRLIDISVPLKAGIKSDPPHMLPQIEYLDHHQTAPAMAEYMG
                     VRVDQLPDGEYAAVEKVQISTHNGTHLDAPYHFFSTMNHALKPGGEPSWRIDEVPLEW
                     CFQPAVKLDFRHMAAGYIVTPGDVEAELKRIGHTLRPLEIVLVNTAAGARYGQDDFVD
                     SGCGMGKAATMYLLERGVRLTGIDGWSWDAPFSLTRDRVRETGDAGLIWEGHRAGREI
                     GYSHLEKLHNLEALPADGFEVVCFPVKVHRGSAGWTRAVAIINDPA"
     gene            1252..1932
                     /locus_tag="VHX39_21440"
     CDS             1252..1932
                     /locus_tag="VHX39_21440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993742.1"
                     /translation="MNHLLAGSQIKLTYLQDRRALSAIDWPSIFDDLTNAGLPVSRIQ
                     WCDLGALTHVVLAVDRNDSRHAGVLGLVERTSPVKPWLMIELALVRPDETKGMLRRSM
                     LAHALARVVCLDGIPLAMAAAHNGRATLNELSRDIRLASLHPPADGNVIELQAAGLAR
                     QIGNDRSVLDLRSVSEGSLLRDLRGLHGIRAMGKKATLSDLSMARMARNAAATRRPRK
                     ATHTGRIG"
     gene            complement(1856..2527)
                     /gene="tenA"
                     /locus_tag="VHX39_21445"
     CDS             complement(1856..2527)
                     /gene="tenA"
                     /locus_tag="VHX39_21445"
                     /inference="COORDINATES: protein motif:HMM:NF015057.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050334 - thiaminase activity [Evidence
                     IEA];
                     GO_process: GO:0006772 - thiamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HEX3993743.1"
                     /translation="MTGFSDRIWQRTTPLRDAIYALDFNKELAAGTLARETFQFYIVQ
                     DALYLDQYARALAIAGARGPDSATLRAFGHYAIEAIAVEQALHERYLREFGVDPASIA
                     SAEPSPDCLGYTSFLMATAYHEPWEVLVAALLPCFWLYWDVGTTIAKSAAADNPYRAW
                     IDTYADDGFGEAVRAVIASTDQTAAAGSDIVRGRMATAFIRSCQYEWLFWDGAWRRRS
                     WPFSP"
     gene            complement(2524..3555)
                     /locus_tag="VHX39_21450"
     CDS             complement(2524..3555)
                     /locus_tag="VHX39_21450"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3993744.1"
                     /translation="MAQNASRFAGAVDQDWLNRHDEPVLEPGLPIIDPHHHLWTRDGN
                     VYLVPELLADIASGHNVVATVFEECHSMYRASGPDQEKSIGETEFVTGVAAMGASGTF
                     GTTKICARMVGRVDLMLGSGARPLLERHMIASGGRFAGIRQSTAWDASDRIHKVVPTR
                     GTLLDPTFRAGFAALSALGLVFDAWVYHPQLSEVADLASAFPNTQIVLNHVGSPILGG
                     RYAANRAQVFTDWRAGMADLAKQPNVTVKLGALPIRLPGVSTAAKDTPPSSEEVAAAW
                     RPWLEASIELFGADRCMFESNFPVQKRWCSYQVVWNAFKRLAANASTAEKAALFAGTA
                     ARVYGVPLA"
     gene            complement(3732..>4940)
                     /locus_tag="VHX39_21455"
     CDS             complement(3732..>4940)
                     /locus_tag="VHX39_21455"
                     /inference="COORDINATES: protein motif:HMM:NF036590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3458 domain-containing protein"
                     /protein_id="HEX3993745.1"
                     /translation="PTPGEPDKQPLVIPVALGLLDGNGQELETKLAGETEATSGTRVL
                     LADAAETTFTFEDVASPPVPSLFRGFSAPIKLSGISPERARFLAAHDTDPFVRWESGQ
                     QYATRVLLDMIPAWHRGEAQAVDSGLIEAMSETLAQSDSDPAFVAEAMYLPGEAFLAD
                     QMAIADVDAIHAVRDVARIAIGNALHDRLRATYDRYTDAGPYSIDGSAIGKRSLRNAC
                     LSYLSAGGDPALAKRQFDTAGNMTDALAAMAVLAGIDRPERDAALAAFHAKWHDDPLV
                     LDKWFSIQATSPLPDTVARVRALSQHADFDLRNPNRIRALVGAFSGANQVRFHDAKGE
                     GYRFLADIVIQLDPANPQVAARLVGSLGQWRRFDAGRQALMKGELRRVLALPGLSKNT
                     NEIVSKSLDT"
BASE COUNT         1006 a         1536 c         1488 g          910 t
ORIGIN      
        1 cgctgcgtaa tcctgacctt ccggtgcttc cgtcaccaaa ttgtcgctga gcatataacc
       61 cggtgcattc cacgcgatca cacggaactt ctcgctcagt gcggcgaact gataccgcca
      121 atgcatcgaa ttggcgccaa cgccgtgcag cagcagcaac accggcgcat ccacagcgcc
      181 cgcttccata tagctgaacc ggtcgcccaa ataacgcgaa cgcgcagccg ccgggatctg
      241 cagaaaacgc aactcgggca gcgccgggat catgccggat cgttaatgat cgcgacggcg
      301 cgggtccatc ccgccgatcc gcggtgcact ttgaccggga agcacacgac ctcgaaccca
      361 tccgccggca gcgcttccaa attgtgcagc ttctcgaggt gggaataacc gatttcccgg
      421 ccggcacgat ggccctccca gatcaggccg gcatccccgg tctccctcac ccgatcacgg
      481 gtaagcgaga acggcgcatc ccaactccag ccatcgatgc cggtcagccg cacgcctcgc
      541 tccagcagat acatggtggc agccttgccc atgccacaac cggagtcgac gaaatcatcc
      601 tgcccatacc gcgcgcccgc cgcggtattg accaggacga tttccaacgg ccgcagcgta
      661 tggccgatgc gtttcaactc ggcctcgacg tcgcccgggg tgacgatata gccggccgcc
      721 atgtgccgaa aatccagttt cacagccggc tgaaagcacc attccaacgg cacctcgtcg
      781 atccgccacg aaggctcccc gcccggcttt agggcatggt tcatcgtcga gaaaaagtga
      841 tacggcgcgt ccagatgcgt gccgttatgc gtgctgatct gcactttttc cactgccgca
      901 tattcgccgt ccggcagctg atcgaccctg acacccatat actccgccat cgccggtgcg
      961 gtctgatggt gatccagata ttcgatttgc ggcagcatat gcggcggatc gcttttaatc
     1021 ccggctttca gcgggacaga gatgtcgatc aggcggcgtg gcatggaaat ctccccggtt
     1081 tcagccaacc acgatagacc agacgaaaac ccactgtcac gccggctgca taagcgtgcg
     1141 aattcgaaat acggttgaga aattgtgacc tggttcacac tttccctcgc cccgattgtg
     1201 ccatagtctg tcactgaaaa agccgaggta aaactgggcg ggacaggggc catgaatcat
     1261 ttacttgccg gttcacaaat aaaactaacc tatttgcaag atcgacgtgc gctgagtgcg
     1321 atcgactggc cttcaatctt cgatgacctg acgaatgccg gtcttccggt gagtcgcatc
     1381 caatggtgcg atctgggtgc tttgacccat gtcgtgctcg cggtcgatcg gaacgacagc
     1441 cgtcacgccg gcgtgcttgg cctggtcgag cggacatcgc cggtcaaacc atggctgatg
     1501 atcgaactcg cgctggtacg gccggacgaa accaaaggca tgctccgacg ctcgatgctg
     1561 gcacatgcgc tggcacgggt agtatgcctg gacggcatac cgctcgcgat ggccgctgcg
     1621 cataacgggc gggcgacatt gaacgagctg agccgggaca ttcgcctggc ttcgctgcat
     1681 ccgccggcgg atggcaacgt tatcgaattg caagccgcag gtctcgctcg tcagatcggc
     1741 aacgaccgat cggtgctgga tctccggtcg gtgtcggagg gctcgctgct gcgtgatctg
     1801 cgcggcctgc acggcatccg cgcgatgggc aagaaggcga cgctgtccga cctgtctatg
     1861 gcgagaatgg ccaggaacgc cgccgccacg cgccgtccca gaaaagccac tcatactggc
     1921 aggatcggat aaacgcagtc gccatccggc cgcggacaat atcgctgccg gccgcggccg
     1981 tctggtcggt agaggcgatg acggcgcgca ctgcctcacc gaacccatcg tcggcgtagg
     2041 tgtcgatcca ggcgcgatac ggattgtccg ccgcagcgga tttcgcgatt gtcgtgccaa
     2101 catcccagta aagccagaaa catggcagta aagccgcgac cagtacttcc cacggctcgt
     2161 gatacgcggt tgccatcagg aagctggtgt agcccagaca atccggcgac ggctccgccg
     2221 aagcaatact ggcagggtcg acgccaaatt cgcggagata gcgttcgtgt aaagcctgct
     2281 cgacggcgat ggcctcgatc gcgtagtggc cgaaggcgcg cagcgtggca ctgtcgggac
     2341 cccgggcgcc ggcaatcgcg agggcacgcg catactgatc aagatacagc gcatcctgaa
     2401 cgatatagaa ctggaatgtt tcccgcgcca gcgtgccggc ggccagttcc ttattgaagt
     2461 ccagggcgta aatggcgtcg cgcaacggtg tggtgcgttg ccagatgcgg tcggagaaac
     2521 cggtcatgcc agaggaactc cataaacgcg ggcggcggtg ccggcgaaca aagcggcctt
     2581 ctctgccgtc gacgcgttgg cggcaaggcg tttgaacgca ttccacacga cctgataaga
     2641 acaccagcgt ttctgcaccg ggaaattgct ttcgaacatg cagcgatcgg cgccaaacaa
     2701 ttcgatgctg gcttcgagcc acgggcgcca cgcggcagcg acttcctcgg acgacggcgg
     2761 ggtatctttt gcagcggtgc tgacaccggg cagacggatc ggcaaggcac cgagtttgac
     2821 tgtcacgttc ggttgtttgg caaggtcggc catgccggct cgccagtccg tgaacacctg
     2881 cgcccgattc gccgcatacc gtccgccgag gatcggactg ccgacatgat tgaggacgat
     2941 ctgggtattg gggaacgcgc tggcgaggtc agcaacctcg gaaagctgcg gatgatacac
     3001 ccaggcatcg aagaccagac ccagggcgct gagggcggcg aagccggcgc ggaatgtggg
     3061 atcgagcagc gttccccgcg tcggcacgac tttgtggatg cggtcgctgg catcccatgc
     3121 ggtggattgc ctgatcccgg cgaaccgtcc gccgctggcg atcatgtgcc tctccagcaa
     3181 tggcctcgcg ccggaaccga gcatgaggtc gactcggccg accatacgcg cgcagatttt
     3241 agtggtgcca aacgtgccgc tggcgcccat tgctgcgaca ccggtgacga actcggtctc
     3301 accaatcgac ttttcctggt ctgggccact ggcgcgatac atcgagtggc actcttcgaa
     3361 gaccgtggcg acaacgttgt ggccgctggc gatatcggcg agcagttccg gcaccagata
     3421 gacattccca tcccgggtcc acaggtgatg atgcggatcg ataattggca gccccggctc
     3481 gaggacgggt tcatcgtgcc tgttgagcca atcctgatcg acagcaccgg cgaaacggct
     3541 cgcgttctgg gccatggctg gcctccttca acaatttcag gcgaaggccg gtgatgagaa
     3601 agcctggtgt cctttgagaa ctttgtgaag tgtggtttcc caccgcaggg acgaacctgt
     3661 ccgggttccc ggccgcgtcc gtattctggc agtcgatttc acaaagttct ccgaggacac
     3721 catgagttct ttcaagtatc cagacttttg gaaacaatct cgttggtgtt cttggaaagg
     3781 cctggcagtg ccaggacgcg acggagttcg cccttcatca gcgcctgacg accggcatcg
     3841 aaccgtcgcc attggccaag cgaaccaacg aggcgcgcgg caacctgcgg attggcagga
     3901 tcaagctgga tcacgatgtc ggcgaggaac cgatagccct cacccttcgc atcatggaac
     3961 cgcacctgat tggcgcccga gaacgcgcca accagggcac gaatgcggtt cggattgcgc
     4021 aaatcgaagt cggcatgctg cgacaaggcg cgcacacggg ccacggtatc cggtaatggt
     4081 gaggtcgcct gaatggagaa ccatttgtcc agcacaagcg ggtcgtcatg ccatttggca
     4141 tggaacgcag ccagcgcggc atcacgttcc ggacgatcga tcccggcaag gacagccata
     4201 gcagcgagtg catcggtcat attgccggcg gtatcgaact gccgtttcgc cagcgccggg
     4261 tcaccacccg cactgagata gctgaggcag gcattgcgta acgatcgctt accgattgca
     4321 gaaccatcga tgctgtacgg tccggcatcg gtgtatctgt cgtaagtggc gcgcaggcga
     4381 tcgtgcaacg cattgccgat ggcaatccgc gcgacatcgc gcaccgcgtg gatggcgtcg
     4441 acatcggcga ttgccatttg atcggcaaga aacgcctcac ccggcaaata catcgcctcc
     4501 gccacaaatg ccggatcact atcagactgg gccagcgtct ccgacatcgc ctcgatcagg
     4561 ccggagtcga ccgcctgcgc ttcgccgcga tgccatgccg ggatcatgtc gagcagcacg
     4621 cgcgtcgcgt attgctgtcc ggactcccag cgaacaaacg gatcggtgtc atgggcagca
     4681 aggaagcgtg cccgttccgg actgatgccc gacagcttta ttggcgcgga gaagccgcgg
     4741 aacaaagatg gcaccggcgg actggccacg tcttcgaaag taaaagtggt ttccgccgca
     4801 tcagccagca gcacccgcgt gccggacgtt gcttccgttt cgcctgccag cttcgtttcg
     4861 agttcctgac cgttgccgtc gagcaatccc aacgccaccg gaatgaccag cggctgcttg
     4921 tcgggctcgc ccggcgtcgg
//
LOCUS       DATAVD010001127        10568 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_111541, whole genome shotgun sequence.
ACCESSION   DATAVD010001127 DATAVD010000000
VERSION     DATAVD010001127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10568
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111541"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1243)
                     /locus_tag="VHX39_21460"
     CDS             complement(<1..1243)
                     /locus_tag="VHX39_21460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3993746.1"
                     /translation="MVTSEGSIFEQDLKQTPANYVPLSPVSFLLRAARIYPQRTAIIH
                     GTRSYTYAQFLERTQRLAAALAQNGVRAGDTVAILAPNIPEMLEAHNAVPGLGAVLCP
                     INTRLDAGAIGFILRHSEAKVVLIDREYSPVMRLALAEAATKPLVIDINDPCEPGGEP
                     IGATNYEDFIAGGDPNFTLQSPADEWQAISLNYTSGTTGNPQGVVLHHRGAYLNATAN
                     ALTFQLSPSSVYLWTLPMFHCDGWTYTWAVTLASGTHICLRRVDPTEIFAAVAEHNVP
                     HMCGAPVVLSMLIHAPAEARRQFRQTVQIATGGAAPPSTVITRMEEMGFAVTHLYGLT
                     ESFGPATVCMWQPELDAMGLAEKSAFMARQGVNTPMLEDAAVFDPATMLPVPADGTTI
                     GELMLRGNTVMMGYLKNPSATR"
     gene            complement(1250..2068)
                     /locus_tag="VHX39_21465"
     CDS             complement(1250..2068)
                     /locus_tag="VHX39_21465"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX3993747.1"
                     /translation="MEDATEAAPNGRILLQRTDNVIVMTLNDPSVLNAFGFKLREDIS
                     WALDQVETSGARCLMITGAGRAFCSGANLNDPDRPPRDRAAEARGEVKSDLESWYNPA
                     FIRLRDLAMPIVTAINGIAAGAGMSLALMGDIRIAASSATFLQAFARIGLVPDCGSSY
                     VLPRMIGMARAMELSLLAERLPAETALAWGMINRVVDDPELPGAAMEMAQRLAEGPAS
                     LALIRKLYWAGLDHCYEQQLDLEAKLQMQAGLTEDYTEGVTAFREKRRTQFTGR"
     gene            complement(2070..3266)
                     /locus_tag="VHX39_21470"
     CDS             complement(2070..3266)
                     /locus_tag="VHX39_21470"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3993748.1"
                     /translation="MANTPLDGFVILDLTQFYQGPYATMMLAKAGADVIKIEPPKGES
                     LRGMAPAGKTGSYPVAALNANKRGITLDLKSEAGRELLKRMVVKADALVENYSPGVMD
                     RLGVGWSVLNEINPRLVYASATGYGLSGPDRDNLAMDFTIQAASGVMSLTGYADGPPL
                     RTGAPYVDILGGAHLYAGLMTALLERERTGHGRLVEVAMVEAVFASLATAIDQYHRAG
                     QTIPRRTGNAFANFNRAPYNVYEAKDGHVAIILVTEAQWQNLLRAMGREDLKDDPRFI
                     RNDARVAHYAETEALVSGWTSARTRAEIFAATSKFKIPCAPVRDLEEAMHDPHMHGRG
                     MLEVVDHYDYGPVVLPNSPLRFHGADKVPTRVSPRVGEHNDEIYGDWLGMSSDERKRL
                     RDAGVI"
     gene            complement(3266..4453)
                     /locus_tag="VHX39_21475"
     CDS             complement(3266..4453)
                     /locus_tag="VHX39_21475"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3993749.1"
                     /translation="MAMPLSGVTVLDFGQIFQGSYATLLMAKAGADVIKIEPLGGEPL
                     RRRTPPGDTTTLPFAMLNANKRGVTLNLKAEKGRALLFEMVKRADVVLENFAPGTMDA
                     LGIGWSVLHPLNARLIYATASGYGISGPNRSDLAMDLTVQAASGIMSVTGFADGPPVR
                     TGVTVADFMGGIHAYGAIMTALYEREHSGVGRLVEVAMQEAVYFTLAGPMEQYRRRGS
                     VPERSGNGAGGATAPYGVFEVKDGYVAIHTGTDQHWFNILEAAGRTDLADDPRLQTMH
                     GRNQHIEEVTAVVTTWTGSLTKAEVEAQGRRFRIPLSPVRDVSEVMHDPHMHERGMLE
                     WVDHPELGRVVLPTTPLRVHGTDVAPAVASPRVGQHNDEIYGDWLGLSADELATLRAE
                     KVI"
     gene            complement(4456..5244)
                     /locus_tag="VHX39_21480"
     CDS             complement(4456..5244)
                     /locus_tag="VHX39_21480"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX3993750.1"
                     /translation="MPLLYEKRGHVAVLTLSRPEARNAWCVEYNERFIELMPTLEDDR
                     DIRCVVLTGDPAGNAFSAGADLKNPKTHTHDSIADFIEEVPSRRRQSAIALVTDFSKP
                     IIAAVNGYAIGIGCIVTYCCDMIVASEAAEWRLPQAGLGIIPAQGGTIRLARWVGKGQ
                     AMRAALGFPMHADEAFRIGLAQWLVPPAALMDKAMEVANHIASLPPLAARLTKESLRS
                     GLEQPLPEAVLGDLYRFAMLEMTEDKAESHRSWRERRRPDFKGR"
     gene            5318..6109
                     /locus_tag="VHX39_21485"
     CDS             5318..6109
                     /locus_tag="VHX39_21485"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX3993751.1"
                     /translation="MTEERQYVDYERNGSIVTIAMNRPEKLNAVSDEVVRQLMTAFRK
                     FDADPEAHVAILCGRGRAFCSGADVHQRQLRSREEFERLGGPQGHGANSGDLLMQSVN
                     WKPVVAAVHGYVLGLGLGMVLDCDLIVAEAGTKFHLTETSRGLGSAKQWAQLHFRSGA
                     FADEIALTGRYFTAEEALAANVINRVAPAGSFMTVAQELAEAVAANPPLSVRATVRTR
                     RWQLGQAVREAAFQQAPMRLYLTEDFHEAALAFKEKRKPNPFKGR"
     gene            complement(6151..6576)
                     /locus_tag="VHX39_21490"
     CDS             complement(6151..6576)
                     /locus_tag="VHX39_21490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003620516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucR family transcriptional regulator"
                     /protein_id="HEX3993752.1"
                     /translation="MPEDVLALTAQIVSAHVTKNTVDVGDLPALIRDVFRTLSTLGEG
                     GAPAPAPEPSKPVVPAARSVFASHIICMECGKKMTMLKRHLMTEHGLTIDQYRGKYNL
                     PGTYPMVAPDYAKTRSSLAKQMGLGKSRSAAPKKAARRK"
     gene            6733..7518
                     /locus_tag="VHX39_21495"
     CDS             6733..7518
                     /locus_tag="VHX39_21495"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3993753.1"
                     /translation="MDLGLNGKVALITGGNRGIGAAIALELAKEGVHVCLVARDPAKL
                     NDVAANIRNLTDVRTAVHAADLREPTEAVAAVKTAIDAFGRLDILVNNAGATKRADFF
                     TLTDEDFHDGFALKFHGYVRMTRAAWPHLRTVKGNIVNIVGVGARAGSAEFTIGGAVN
                     VAILNFTKAMADIGVKDGVRVNAINPGLIETERFGRTIERTMHNRSCSREAALAFLLS
                     SWGTTRVGRPEEIGAMAAFLASARADYLQGSIIDIDGGATRSL"
     gene            7534..8889
                     /locus_tag="VHX39_21500"
     CDS             7534..8889
                     /locus_tag="VHX39_21500"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX3993754.1"
                     /translation="MAFAPEQITARLADFAVNTQPAQWPDAVHREALRSFFNVFGCTI
                     GGAQHEMVEVADQTLGAFAGPAQATLLARGRRADILHASLINGLASSIYSFDDTHETA
                     VVHPAGPIAAAVLALAEYRPVSGADLLAAFALGVEMTCRLCLGTTVAPADGSFAWSGT
                     GISMSFGAAVAAGRLLGLDVQKMRVAMGLALSEAGGFRAMHGTAAVSFMPAHGGQMGL
                     RAALLAARGFTAGLSALEGKSGYLSVFCTTPYLDALAGGLGQRFEVLRNTYKAYPCGI
                     VIQPIIDACLKLREDHRPAPDRIAGVAIQASPGAMALCNNRNPQDEMQAHVSLHHWTA
                     VALIRGTARIKDMETETAVKSPELMAFQSKVEATLNPALAADQTEVTITMNDGATHVC
                     RIEHGIGSKLNPMSNADLERKFFGLAEPVIGAARTREVIEQTWNLSALADAGSLARAA
                     A"
     gene            8886..10496
                     /locus_tag="VHX39_21505"
     CDS             8886..10496
                     /locus_tag="VHX39_21505"
                     /EC_number="1.1.99.1"
                     /inference="COORDINATES: protein motif:HMM:NF002550.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="choline dehydrogenase"
                     /protein_id="HEX3993755.1"
                     /translation="MTGETFDYIVTGAGSAGCAVAGRLSENGRYRVLLLEAGGRDTNP
                     WIHIPLGFARTYVDPKVNWKFETQPQPQLNNRQLYLPRGKTLGGSSSINGMVYIRGNH
                     GDYDEWRQRGCEGWDWDSVLPFFRKAENQVRGEDEFHGVGGPLHVSDQPAKSELTEAA
                     LQACVQAGIAENPDFNGAQQEGCGYYQTTTNRRRRWSAAKAYLEPARGRDNLVVQTGA
                     HATKVLIENDRATGVEYHTDQGKRVAVARREVVVSGGAYGSPQLLQLSGVGPGQHLQD
                     LGIAVVKDMPAVGSNLHDHFNTNLAFRCSKAITLNDLENSWPKKISAAIQYALFRSGP
                     MASNGIHAGLFTRSDPRLERPDLQINIFEWSTMERSAVRVKPHPFPGFTLMPVHLRPD
                     GRGTVRLKSSDPLAPPAVLFDYLRTDYDVQALLAGIRLCRLIAAQPALQPYTMDEILP
                     GTATQSDDDLVSYVRQSGVSNQHPTSSCAMGQGPNTVVDPRLRVHGIDGLRVADASIM
                     PVVVGGNTNAPTIMIGEKCAAMMLEDAA"
BASE COUNT         1999 a         3277 c         3245 g         2047 t
ORIGIN      
        1 cccgagtggc ggacgggttc ttcaaatacc ccatcatcac ggtattgccg cgtaacatca
       61 gctcgccgat ggtggtgccg tctgccggca ccggcagcat cgttgccggg tcgaacacag
      121 ctgcgtcttc cagcatcggc gtgttgacgc cctggcgcgc catgaacgcc gatttttccg
      181 ccaggcccat tgcatcgagt tcgggttgcc acatgcatac cgttgcagga ccgaaactct
      241 cggtgagccc gtagaggtgg gtcaccgcga accccatctc ctccattcgg gtgatcaccg
      301 tcgagggcgg cgcggctccg ccggtcgcga tctgcaccgt ctggcggaac tgtcgccgag
      361 cttctgcagg cgcatggatc agcatcgaca gcacgaccgg ggcgccgcac atatgtggta
      421 cgttatgttc agcgacggca gcgaagattt ccgtagggtc gactcgccgc aggcaaatgt
      481 gagttcctga cgccaaagta acggcccagg tataggtcca gccgtcgcag tggaacatgg
      541 ggagggtcca gaggtagaca ctggatggcg acaactggaa ggtcagcgcg ttggcggtgg
      601 cattcaggta ggcgccgcga tgatgcagca cgacaccttg gggattgccg gtcgtaccgg
      661 acgtgtaatt gagtgagatg gcctgccact cgtccgccgg cgactgcaat gtgaagttcg
      721 gatcgccgcc ggcgatgaaa tcttcgtagt tggtggcgcc gattggttct ccaccgggct
      781 cgcacggatc gtttatgtca atcaccagag gtttcgtcgc ggcctcggcg agggccaggc
      841 gcatgaccgg ggaatattcc cggtcgatca gcacgacctt cgcctccgag tggcgcagaa
      901 tgaagccgat ggcgccggcg tccagccgcg tgttgatcgg gcacagcacg gcacccagac
      961 ctggaaccgc gttatgggcc tcgagcattt cgggaatgtt cggcgccaga attgccaccg
     1021 tatcgcccgc cctcacccca ttttgcgcca acgctgccgc caatcgttgc gtacgctcca
     1081 aaaactgcgc gtaggtgtag ctgcgagtgc cgtgaatgat ggcggtccgc tgcgggtaga
     1141 tgcgtgcggc gcgcagcaga aacgaaaccg gcgatagcgg gacgtagttg gccggcgttt
     1201 gcttcagatc ctgctcgaaa atcgaccctt ctgaggtaac catggcatct tacctcccgg
     1261 tgaactgtgt ccgccgcttc tcccggaacg ccgtgacacc ttcggtatag tcctcggtca
     1321 ggccggcctg catctgcagt ttcgcctcca gatcgagctg ctgttcgtaa caatgatcca
     1381 aaccagccca gtacagcttg cggatcagcg ccagcgacgc cggtccctca gccagacgtt
     1441 gggccatttc catcgccgca ccgggcagct ccgggtcgtc cacgacgcga ttgatcatgc
     1501 cccaggccaa tgcggtttcc gcgggcaggc gttctgccag cagcgaaagc tccattgccc
     1561 gcgccatccc gatcattctg ggcaacacgt acgacgagcc gcagtccggt accaggccga
     1621 ttcgcgcaaa cgcctgcaga aacgttgccg aactggccgc gatacgaata tcccccatca
     1681 gcgcgaggct catgccggcg cccgcggcga tgccattgat cgccgtcacg atcggcatgg
     1741 caagatcgcg caaccgaatg aaagccggat tgtaccagga ttccaggtcg ctcttgacct
     1801 cgccgcgcgc ctcggcagca cggtcgcgcg gcggccgatc cgggtcgttc aaattggctc
     1861 cggaacaaaa cgcccgtccc gcgccggtga tcatcagaca gcgcgcgcca ctggtctcca
     1921 cctgatccaa agcccaggag atgtcctcgc gcaatttgaa accgaaggcg ttgaggacgc
     1981 tgggatcgtt caacgtcatt acaataacgt tgtcggttcg ttgcagcagg atccgaccat
     2041 tgggggcggc ttccgtggcg tcttccatat caaatcactc ccgcgtcgcg cagccgtttt
     2101 cgttcgtcag aggacatgcc gagccagtcg ccataaatct cgtcgttgtg ctcgccgacg
     2161 cgagggctga cccgggtcgg caccttgtct gcgccatgga accgcaacgg cgaattcggc
     2221 agcacgaccg gtccgtagtc ataatgatcg accacctcca gcatgccgcg gccgtgcatg
     2281 tgcggatcgt gcatcgcctc ctccagatcg cgcaccggcg cgcaggggat tttgaacttg
     2341 ctggtggcag caaagatttc cgcccgcgtg cgggccgagg tccagcccga caccagcgcc
     2401 tcggtttccg cgtaatgtgc aacacgggca tcgttccgga tgaaccgcgg atcgtctttc
     2461 aggtcctcgc ggcccatggc gcgcagcagg ttttgccact gcgcctcggt caccaggatg
     2521 attgcgacgt ggccgtcctt cgcttcgtaa acgttataag gcgcccggtt gaaattggcg
     2581 aaggcattgc cggtccgcct ggggatcgtc tggccggcgc ggtggtattg atctatggca
     2641 gtcgccagcg aggcaaacac cgcctccacc attgccactt ccaccagccg gccgtgaccg
     2701 gtgcgctcgc gttccagcaa ggcggtcatc aggccggcgt aaagatgcgc accaccgaga
     2761 atatccacgt aaggcgcgcc ggttcgcagc ggcggtccat cggcatagcc ggtcaggctc
     2821 atcacgccgg aggcagcctg aatggtaaag tccattgcca gattgtcacg gtctggcccc
     2881 gacaggccgt acccggttgc cgacgcataa accagccgcg ggttgatttc attcagcaca
     2941 gaccaaccga cgcccagtcg atccatcacg ccaggcgaat aattttcgac caaagcatcg
     3001 gccttgacca ccatgcgttt cagcaactcg cggcctgctt cgctcttaag atccagcgtg
     3061 atcccgcgct tgttggcatt cagcgccgcc accggatagg aaccggtctt gccggccggc
     3121 gccatgccgc gaagactttc gcctttcggc ggctcgattt tgatcacgtc ggcgcccgcc
     3181 ttggcgagca tcatcgtcgc gtaaggtcct tggtagaact gcgtcagatc caggatgacg
     3241 aaaccatcca gcggcgtgtt cgccatcaaa tcaccttttc ggcacgcaac gttgccaact
     3301 cgtccgccga aagccccagc caatcaccgt aaatttcgtc gttgtgctga ccgacccgag
     3361 ggctggccac ggccggtgcg acatcggtac catgcacccg aagcggcgtc gtcggcagca
     3421 ccacacggcc gagttcggga tgatccaccc actccaacat gccgcgctca tgcatgtgag
     3481 gatcgtgcat cacctcgctg acatcgcgca ccgggctcaa tggaatgcgg aaccggcggc
     3541 cttgcgcctc gacctccgct ttggtcagcg aaccggtcca ggtggtgacg accgcggtga
     3601 cctcttcgat atgctgattg cggccatgca tcgtttgcaa ccggggatcg tctgccagat
     3661 cggtgcgtcc cgccgcctcc aggatgttga accagtgctg atcggtgccg gtgtgaatgg
     3721 cgacatagcc gtccttcacc tcgaacacgc cgtatggcgc ggtcgcacct cccgcgccat
     3781 tgccgctgcg ttcaggcacg ctgccccgcc tgcggtactg ttccatcgga cccgccaggg
     3841 tgaaatacac tgcctcctgc atggcgactt cgaccaacct gccgacgccg ctgtgctcgc
     3901 gttcgtacaa agcggtcatg atggcaccgt aagcgtgaat gccgcccatg aagtcggcga
     3961 ccgtcacgcc ggtccgcacc gggggaccat cggcaaatcc ggtgacgctc atgatgcccg
     4021 aggccgcctg cacggtcaga tccattgcca gatcggagcg gttcggcccg ctgatgccat
     4081 aaccggacgc ggtggcataa atcagccgcg cattcaaagg atgcagcaca gaccagccaa
     4141 tacccaacgc gtccatggtg ccgggagcga agttttccag cacgacatcg gcccgcttga
     4201 ccatctcgaa cagcagagcg cggccctttt ccgcttttaa attcaacgtg acgccgcgct
     4261 tgttggcatt cagcatggcg aacggcaagg tcgtcgtgtc gcctggcggc gtgcggcggc
     4321 gtaacggttc gccgcccaga ggctcgatct tgatcacgtc ggcgccggcc ttggccatca
     4381 gcaacgtggc gtaagatccc tgaaatatct ggccaaaatc cagtaccgtc acacccgaaa
     4441 gcggcatcgc catgatcaac gtcccttgaa gtctggtctg cggcgttccc gccaggagcg
     4501 gtgactttcc gctttgtcct cggtcatttc cagcatcgcg aagcggtaca gatcgcccag
     4561 taccgcctcc ggcaacggct gctccaaacc cgagcgcaac gattccttgg tcagtcgcgc
     4621 ggccaacggc ggcagtgacg cgatatggtt cgccacctcc atcgccttgt ccatcagcgc
     4681 cgccggtggc accagccatt gcgcgagtcc gatgcgaaac gcctcgtccg cgtgcatggg
     4741 aaagcccaga gcggcacgca tcgcctggcc tttgccaacc cagcgcgcga gccggatggt
     4801 gccgccctgc gccgggataa tgcccagccc ggcttgcggg aggcgccatt cggctgcctc
     4861 ggaggcgacg atcatgtcgc aacagtaagt gacgatgcag ccgatgccga tcgcgtaacc
     4921 attcaccgcg gcaatgatcg gcttggaaaa gtcggtgacc agcgcaatcg cactttggcg
     4981 ccgccggctc ggcacttcct cgatgaaatc ggcgatcgag tcatgcgtat gggtcttcgg
     5041 atttttcaga tcggcgcccg cactgaacgc attgcccgcc ggatcaccgg tcagcacgac
     5101 acagcggatg tcgcggtcgt cttccagcgt cggcatcaac tcgatgaaac gctcattata
     5161 ttcgacacac cacgcgttgc gcgcttccgg ccggctcagc gtcagcaccg caacgtgtcc
     5221 gcgtttctca tacagcaatg gcatcgcacc gttccctctt tcccgtccgt ccggcctacg
     5281 gtacaccgcc cgctgaagaa agccatgggg acgcgcgatg accgaggaac ggcaatacgt
     5341 cgactatgaa cgcaacggca gcatcgtcac catcgcgatg aaccggccgg agaaactgaa
     5401 cgcggtcagc gacgaagtcg tgcgccagtt gatgaccgcg tttcgaaaat tcgacgccga
     5461 ccccgaggcg catgtcgcga tcctgtgcgg ccgcggccgg gccttttgca gtggcgccga
     5521 cgtccaccag cgccagctcc gctcccgcga agaattcgag cgattgggcg gcccacaagg
     5581 ccatggcgcc aactccggcg atctgctgat gcaatcggtc aactggaaac cggtcgtcgc
     5641 tgccgtccac ggctacgttc tcggccttgg actgggcatg gtactggatt gtgatttgat
     5701 agttgctgag gcaggaacga aattccattt aaccgagact tcgcgcggcc tcggttcagc
     5761 gaagcaatgg gcgcagttgc actttcgcag tggcgcattt gccgacgaaa tcgccttgac
     5821 cggacgttac tttacggccg aggaagcgct ggcggccaat gtgatcaacc gcgtggcgcc
     5881 cgccggttca ttcatgacgg tggcgcagga actcgccgaa gccgtggccg cgaacccgcc
     5941 gttgagtgtg cgagcgacgg tgcgaacgcg ccggtggcag cttggtcagg cggtgcgtga
     6001 ggctgcgttc cagcaagcgc ccatgcggct ttacctgacc gaggactttc atgaagctgc
     6061 cctggcgttc aaagagaaac gcaaacccaa cccatttaag ggacgctgac cacaccctgc
     6121 ccctggggta cggtcaactc cacaatttgc ctacttgcgc cgtgccgcct tcttcggtgc
     6181 cgcggaacgg ctcttgccca gtcccatttg cttggcgagg gaagaacgcg ttttggcgta
     6241 gtcgggtgcc accatcgggt aggttccggg tagattatac ttgccccggt actgatcgat
     6301 ggtcagtcca tgctcggtca tcagatgccg tttcaacatg gtcatctttt tcccgcactc
     6361 catgcaaatg atgtgcgagg cgaagaccga gcgggcagca ggcaccaccg gcttgctcgg
     6421 ctccggggcc ggtgcgggcg cgccgccttc gcccaaagtc gaaagtgtac ggaagacgtc
     6481 acgaatgagt gccggcaggt ctccgacatc cactgtgttc ttcgtcacat gggcgctgac
     6541 gatttgcgct gtgagggcca atacatcctc tggcatatgg tcttttcctg ttcgttaggt
     6601 tgcttcaaag tacccgaacc tatcacgagt tccaagtttc tgttgtgatc cccgacacgg
     6661 aatctcgcga aaagttgctc cttgtcgcca atcccggcat gcttgtcgag caggcacgtg
     6721 gggaacgccg gaatggatct cggtctgaac ggaaaagttg cactgattac cggaggcaac
     6781 cgaggcatcg gtgcagcgat tgcgttggaa ctggcgaagg aaggcgtcca cgtctgcctg
     6841 gtcgcgcgcg atccggcgaa gctcaacgac gttgccgcaa atattcgcaa cctcaccgat
     6901 gtgcgcaccg cagtccatgc cgctgattta cgggagccga cagaagcggt cgctgcggtc
     6961 aagaccgcaa ttgatgcgtt tggccgtctc gatattttgg tgaacaacgc tggcgcgacg
     7021 aagcgcgccg actttttcac gctgaccgac gaggattttc acgacgggtt cgcgcttaaa
     7081 tttcatggtt atgtgcgaat gacccgtgcc gcctggccgc atttgcggac cgtcaaaggc
     7141 aacatcgtca acatcgttgg cgtcggtgcg cgcgcgggct ctgccgagtt caccatcggc
     7201 ggcgcggtca acgtcgccat cctcaacttt acaaaagcga tggccgatat cggtgtcaag
     7261 gatggggtgc gggtcaatgc gatcaacccc ggcctgatcg agaccgaacg tttcggccgc
     7321 acgatcgaac gcaccatgca caaccggtcg tgctcgcggg aggcagcgct ggcgtttctg
     7381 ttgtcgtcgt ggggcaccac ccgcgtggga cggcccgagg agatcggcgc aatggccgct
     7441 ttcctcgcct ccgccagagc cgactatctg cagggatcga tcatcgacat cgacggcggc
     7501 gcgacacgct cgctctgatc gggaggtatc gtcatggcat tcgcacccga acaaatcacc
     7561 gcgcggctgg cggattttgc ggtcaatacg cagccggcgc agtggccgga tgcggtccac
     7621 cgcgaggcgc tgcgctcatt tttcaatgtc ttcggctgca ccattggtgg cgcgcagcac
     7681 gaaatggttg aggtcgccga tcagacgctt ggggcctttg ccggaccggc gcaggcaacg
     7741 ttactggccc gcgggcggcg agccgacatt ttacatgcct cactgatcaa cgggctggct
     7801 tcgagtattt acagctttga tgacacccat gaaacggctg tcgtgcatcc cgctggtcca
     7861 attgccgccg ccgttttggc actggccgaa taccggccgg tctccggcgc cgatttgctc
     7921 gcagcctttg cattgggcgt cgaaatgacc tgccggctgt gtctgggcac cactgtggcg
     7981 ccggccgacg gcagtttcgc gtggtcgggc accggtatca gcatgagttt tggcgccgcc
     8041 gtggcagccg gccgtctgtt gggtctggat gtgcagaaaa tgcgcgtggc aatggggctt
     8101 gcgctgtccg aggccggcgg ctttcgcgcc atgcacggca cggctgcggt ctcgtttatg
     8161 ccggcgcatg gcggacaaat gggattgcgc gccgccctgc tggcagcacg cggctttacc
     8221 gccggcctgt cagcgctgga gggaaagtcc gggtatctgt cggtgttttg cacgacaccc
     8281 tacctcgatg cgctcgccgg cggactgggc caacggttcg aagttctgcg caatacatat
     8341 aaagcgtacc cgtgcggcat tgtgatccag ccgatcatcg atgcttgcct gaaactacgc
     8401 gaagatcacc ggcccgctcc ggatcggatc gcaggcgtgg cgatccaggc ctcgcccggc
     8461 gcgatggcgc tgtgcaacaa ccgtaatcca caggacgaga tgcaggccca tgtcagtctg
     8521 catcactgga ccgcggtggc gctgattcgc ggcactgccc ggatcaagga catggagact
     8581 gaaaccgccg tgaaaagccc ggaactgatg gcgttccaaa gcaaagtgga agcaaccctg
     8641 aacccggcat tggccgcgga ccagaccgag gtgacgatca ccatgaacga cggtgcgacg
     8701 catgtttgcc ggatcgaaca cggcatcggc agcaaactca atccgatgtc caatgccgat
     8761 ctcgaacgca agtttttcgg actggccgaa ccggtgatcg gcgcagctcg cacccgggag
     8821 gtgattgagc aaacctggaa cctctcggca ttggccgatg ccggttcgct ggcgcgagct
     8881 gccgcatgac cggagagacg ttcgattata ttgtcaccgg ggccggttcg gcgggctgcg
     8941 ctgtggctgg ccggttgtcg gagaacggcc ggtatcgcgt gctgctgctg gaggccggcg
     9001 ggcgggacac caatccgtgg atccatattc cgttggggtt tgctcgtact tacgtcgatc
     9061 cgaaggtgaa ctggaagttc gagacccagc cgcaaccgca actgaacaac cggcaactgt
     9121 atttgccgcg cggcaagaca cttggcgggt cgagttcgat caacggtatg gtttatatcc
     9181 gcggcaatca cggcgactac gacgaatggc ggcaacgtgg ttgcgaaggc tgggactggg
     9241 attcggtgct gccgttcttc cgcaaagccg aaaatcaggt gcgcggcgag gatgagttcc
     9301 atggcgtcgg cgggccgctg cacgtctccg accaaccggc aaagtccgaa ctcaccgagg
     9361 cggcgctgca agcctgtgtg caggcgggca ttgcggagaa cccggatttc aatggagcgc
     9421 aacaggaggg gtgcggatat tatcagacga caacgaaccg tcggcggcgg tggagtgcgg
     9481 caaaagccta tctggaaccg gcgcgtggac gggacaatct ggtggtgcag accggagccc
     9541 atgccaccaa ggtactgatc gagaacgatc gtgccaccgg cgtcgaatat cacaccgatc
     9601 agggcaagcg tgttgcggtg gcacggcgcg aggtggtggt ttccggcggc gcttatggtt
     9661 cgcctcagtt gctgcagttg tcaggggttg gcccaggaca acatttacag gacctgggga
     9721 ttgccgtggt gaaggacatg ccggcggtcg gatcgaatct gcacgatcat ttcaatacca
     9781 atctggcctt ccggtgtagc aaagccatta cgctgaatga tctggagaat tcgtggccga
     9841 agaaaatcag tgcggccatt cagtatgcac tgttccggtc cgggccgatg gccagcaatg
     9901 gcattcatgc cgggttgttc acacggtccg atccgcggct ggaacggccc gacctgcaaa
     9961 tcaacatctt cgaatggagc acgatggaac gcagcgccgt ccgggtgaag ccgcatccgt
    10021 ttcccgggtt tactttaatg ccggtgcatt tgcgccccga tggccgcggc acggtgcgat
    10081 tgaaaagttc cgatccgctg gcgccgcctg ccgtgctgtt cgattattta cgcactgact
    10141 acgacgttca ggcgttgctg gcgggcattc ggctgtgccg gctgatcgcc gcgcagcccg
    10201 cgctgcaacc ttatacgatg gacgaaatcc tgccggggac cgcgacacaa tcggatgacg
    10261 atctggtgag ctatgttcgt cagagcggcg tttcgaacca gcatccaacc agttcctgtg
    10321 ccatgggaca gggtccgaac accgtcgttg accctcgctt gcgcgtgcac ggaattgatg
    10381 gattgcgggt ggccgatgcc tcgatcatgc cggtcgtcgt cggtggcaat accaatgcgc
    10441 caaccatcat gatcggcgag aaatgcgctg ccatgatgct ggaagatgca gcctgacctt
    10501 aaggaatgaa catggcggac gagtttgact ttatcgtgac gggtgccggt tcggccggct
    10561 gcgtgctg
//
LOCUS       DATAVD010001128         2100 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1783790, whole genome shotgun sequence.
ACCESSION   DATAVD010001128 DATAVD010000000
VERSION     DATAVD010001128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1783790"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..372
                     /locus_tag="VHX39_21510"
     CDS             <1..372
                     /locus_tag="VHX39_21510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HEX3993756.1"
                     /translation="LMYAQRGHGKRSSFYSDYTFGVWRDDELVPVGKAYFGFTDQELT
                     FLDRWIRNHTTARFGPVREVEKSMVLEVAFDAVQLSNRHKSGVAMRFPRLARIRTDKP
                     AVEADRLETLMALVEDRAAAD"
     gene            444..1238
                     /locus_tag="VHX39_21515"
     CDS             444..1238
                     /locus_tag="VHX39_21515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX3993757.1"
                     /translation="MSLTINATKQRLKSGKMALGFGVHHLRTAATPVLAAATGHDWMF
                     IDTEHGAFSVQETTQLCIAALPTGVTPIVRVCAGALDEATRALDNGALGIVVPHVDTA
                     ADAKRIADAFHYPPMGHRSWGGPPAIYGFRAPSNAEAQAAINGEILTVVMLESPEAVG
                     NADAIAAVPGVDVLFIGTSDLTAELGISGQMGHPKVVEAYQSVGEACRRHGKVLGMGG
                     VYDEEHASRYVSMGARFLLTGSDHSYIMSGAAQRSAFFNGLANAPG"
     gene            complement(1344..>2100)
                     /locus_tag="VHX39_21520"
     CDS             complement(1344..>2100)
                     /locus_tag="VHX39_21520"
                     /inference="COORDINATES: protein motif:HMM:NF024301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEX3993758.1"
                     /translation="QLADLKAKGITPKFIYTIPTIQNPTASILPLDRRLALIKLAREY
                     NVAIFEDECYADLLWEGIEAPPALYALDPGCVIHLGSFSKSLAPALRLGYIIAGWDIM
                     SRLLPLKGDSGTGALDQMVVAEYFSKNYDRHMGHLNGVLRGKLDAMTEAVAREFGSSA
                     ECWAPKGGIFLWIKLPDSVDVRKLVKPAAEAGIVFNPGPEWAVSADNSSNCLRLCFAM
                     PSKETIKSGVAELARVCYEQTGIPPRSGNVVRG"
BASE COUNT          372 a          581 c          729 g          418 t
ORIGIN      
        1 ctgatgtatg cgcagcgcgg ccatgggaag cgcagcagtt tctattccga ttacacgttc
       61 ggggtgtggc gggatgacga gctggtgcct gtgggcaagg cgtatttcgg ctttaccgac
      121 caggaactga cgtttttgga ccgatggatc cgtaatcata ccaccgctcg gtttggtccg
      181 gttcgcgagg tggagaagtc gatggtgctg gaagtcgctt tcgatgcggt ccaattgtcc
      241 aatcgccaca aatccggggt ggcgatgcgg tttcccagat tggcccgcat ccgcaccgac
      301 aagccggcgg tggaggctga tcggctggag acgctgatgg cactggtgga agaccgggcg
      361 gcggccgatt gactggggcg gcgggtgatt gaccaaggcg gcggggcgtg ctgcgttcgc
      421 ggtcaaacga aatggcggat atcatgtccc tgacgatcaa tgcgaccaag caacgcttga
      481 aatccggaaa aatggcactg gggttcggtg tgcatcacct gcgtaccgcg gccacgccgg
      541 tgctggctgc tgccaccggg catgactgga tgttcatcga caccgaacat ggtgcatttt
      601 ctgtccagga aaccacgcag ctttgcatcg ccgcattgcc gaccggcgta accccgattg
      661 tccgggtctg tgccggggcg ctggatgagg cgacccgggc gctggacaat ggcgcgctgg
      721 ggatcgtcgt gccgcatgtc gataccgcgg ccgacgcgaa gcggatcgcc gatgcgttcc
      781 actacccgcc gatggggcac cgaagctggg gtggcccgcc ggcgatctac ggattccgag
      841 cgccgagtaa cgctgaggca caggcggcga tcaacgggga aattttgacc gtggtgatgc
      901 tggaaagccc ggaggcggtg ggcaacgccg acgccattgc ggcggttccg ggtgtggatg
      961 tgctgtttat cgggacctcc gacctgacgg cggagctggg gatttccggg cagatggggc
     1021 accccaaggt tgtggaagcg tatcagtcgg ttggcgaggc ttgtcgtcgc catggcaagg
     1081 tgctgggcat gggcggcgtg tatgacgagg agcacgccag ccgttacgtt tcgatgggcg
     1141 ctcggttttt gctcacgggg tcggatcata gctacatcat gagcggtgcg gcgcagcgat
     1201 ccgcgttctt caatgggctg gcgaacgcgc cgggctgacg cgtccgccgt ttgccaggat
     1261 tcttgagcga gcaactttgt tttcagtggt ctgctggtcc cagaagcccg gcgcaagatg
     1321 cgacgaactt ctggggcagg acactagccg cgaacgacgt tgccgctgcg gggcggaatc
     1381 cctgtctgtt cgtaacaaac ccgagcgagt tcggcgacac cggatttgat tgtctctttg
     1441 ctgggcatgg cgaagcacag gcggagacag ttacttgagt tgtcggcgct gactgcccat
     1501 tccgggcccg gattgaatac gatgccggct tcggccgcgg gcttcaccag cttgcggaca
     1561 tcgacgctgt ccggcagttt gatccatagg aagatgccgc ctttcggagc ccagcattcc
     1621 gccgacgaac cgaattcgcg ggcgacggcc tcggtcatgg catccagttt gccgcgcagc
     1681 acaccgttca ggtggcccat gtggcgatcg tagtttttcg agaaatattc ggcgacgacc
     1741 atctggtcca gggcgccggt gccgctgtcg cccttcagcg gcaacagccg gctcatgata
     1801 tcccagccgg cgatgatgta gccaagccgc agcgccgggg cgagcgattt cgagaacgaa
     1861 ccgagatgga tgacgcagcc gggatcaagc gcatatagcg cgggcggtgc ctcgatgcct
     1921 tcccacagca ggtcggcgta acattcatcc tcaaagatcg cgacgttgta ttcgcgggcc
     1981 agcttgatca gggcgagccg gcgatccagg ggcaggatgc tggcggtcgg gttctggatg
     2041 gtggggatcg tgtagatgaa cttgggcgtg atgcccttcg ccttcaggtc ggccagttgc
//
LOCUS       DATAVD010001129         1605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_480610, whole genome shotgun sequence.
ACCESSION   DATAVD010001129 DATAVD010000000
VERSION     DATAVD010001129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_480610"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..225
                     /locus_tag="VHX39_21525"
     CDS             <1..225
                     /locus_tag="VHX39_21525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017405992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEX3993759.1"
                     /translation="DVLADICRKAGIDPAAFVAAINDQANKDKLRNNTQELIDRGGFG
                     SPTMFVGGDDMYFGNDRMPLVRDAVLRRRK"
     gene            265..1287
                     /locus_tag="VHX39_21530"
     CDS             265..1287
                     /locus_tag="VHX39_21530"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3993760.1"
                     /translation="MSCLCGRRHLLLGGLAAAFIPSARAAPAVHMIDVHHHIVPPAYV
                     DAVKRAKLDNPPMTSWTPEKSLEDMDKAGTATSIMSPMPPQVGFLPAAEAAKVARESN
                     EWSRQCAKDHPGRFGVFAMLPMPYVDESLKEIEYAFDTLKVDGVGLMTNYGDKWLGYD
                     EFAPVFNELNRRKAVVYTHPMSPACCVNLVKGVSDAAIDWGADTTRTMASLIFSGASA
                     RYSDINFIFSHGGGVITSVAERFRIQMVNTPPYKGKFTRDMVDHELNRFYYDTAQVSN
                     EVTIQALAKLVGVSQIVFGTDFPYRTSAEHVAGLTARFNAEDLAAIGRGNALRILPAW
                     RNTQPG"
     gene            complement(1284..1520)
                     /locus_tag="VHX39_21535"
     CDS             complement(1284..1520)
                     /locus_tag="VHX39_21535"
                     /inference="COORDINATES: protein motif:HMM:TIGR02605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FmdB family zinc ribbon protein"
                     /protein_id="HEX3993761.1"
                     /translation="MPNYEYECETCGPFTENRPMAEFDQPQPCPDCGDTSPRLLTCPA
                     LGGGATEDAGISAPSHPGGCACCAAPRSWSAEAV"
BASE COUNT          322 a          461 c          506 g          316 t
ORIGIN      
        1 gacgtgctgg cggatatttg ccggaaggcg gggattgacc cggcggcatt cgttgcggcg
       61 atcaacgatc aggcgaacaa ggacaagctg cgcaataaca cgcaggagct gatcgaccgt
      121 ggcgggtttg gttcgccgac catgttcgtc ggcggcgacg acatgtattt cggcaatgac
      181 cgcatgccat tggtgcgtga cgcggtgtta cggcgacgta aataagcgcc tcgaacaacg
      241 gggacgaaca gggaagggaa accaatgagt tgtttgtgtg ggcgccggca tctgttgctc
      301 ggcgggttgg ctgcggcgtt cattccctcc gcacgggccg cgccggcggt tcatatgatc
      361 gacgtgcatc atcatatcgt cccaccggcc tacgtcgatg cggtcaaacg agcgaaactc
      421 gacaatccgc cgatgacatc ctggacgccg gaaaaatcgc ttgaggacat ggacaaggcg
      481 ggaaccgcca cctccatcat gtccccgatg ccgccgcagg ttggattttt gccagcggcc
      541 gaggcggcca aggtcgcgcg ggaatccaac gagtggtcga ggcagtgtgc caaagatcat
      601 cccggccgat tcggcgtctt tgcgatgttg ccgatgccgt atgtcgacga aagcctgaag
      661 gaaattgaat acgccttcga taccttaaag gtcgacggcg ttggcttgat gaccaattat
      721 ggcgacaaat ggttgggcta cgacgaattc gctccggtct tcaatgaact gaatcggcgc
      781 aaggcggtgg tttataccca cccgatgagt ccggcatgct gcgtcaatct ggttaaaggc
      841 gtttcggatg cggccatcga ttggggcgct gatacgacaa ggacaatggc cagtctgatc
      901 ttcagcggtg catcagcacg gtacagcgat atcaacttca tattttcgca cggtggcggc
      961 gtgatcacct cggtcgcgga acgatttcgc atccaaatgg tcaatacgcc gccgtacaaa
     1021 ggcaagttca ctcgcgatat ggtcgatcac gaactgaacc gcttttatta cgacaccgcg
     1081 caggtctcca atgaggtcac gatccaggct ttggccaaac tcgttggggt gtcgcagatc
     1141 gtgttcggca cggatttccc gtaccgcacc agcgccgaac atgtcgccgg cctgaccgct
     1201 cggttcaacg ccgaggatct ggcggcgatc ggccggggga acgcactgcg gattctgccg
     1261 gcgtggcgga atacccagcc tggttagacc gcctcggcgc tccaacttct cggcgcagca
     1321 cagcacgcgc agccgccggg gtgcgacggc gccgatatcc ctgcgtcctc ggtcgcaccg
     1381 ccccccagcg ctgggcaggt cagcaaccgc ggagaggtat cgccgcaatc ggggcagggc
     1441 tgcggttgat cgaactctgc catcggccgg ttctcggtga acgggccgca ggtttcgcat
     1501 tcgtactcgt aattgggcat ggctacaccc ttgtcagatc agtggatttc gcccgaccgc
     1561 ttcagcgcgt cgcgcagttt cgcgggcgag aagtcgggcg aacgg
//
LOCUS       DATAVD010001130         2526 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2901047, whole genome shotgun sequence.
ACCESSION   DATAVD010001130 DATAVD010000000
VERSION     DATAVD010001130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2526
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2901047"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..619)
                     /locus_tag="VHX39_21540"
     CDS             complement(<1..619)
                     /locus_tag="VHX39_21540"
                     /inference="COORDINATES: protein motif:HMM:NF024981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter"
                     /protein_id="HEX3993762.1"
                     /translation="MNPITLLSRLNIDPYIAAIVGMVGLASLAPLHGAATIAGGYATK
                     AAIALLFFLHGAKLAPRAALAGAQNWRLHAVVLVASFMLFPVLGMTARALAPQLLPPA
                     LWSGLLLMCMLPSTVQSSIAFTSIARGNVPAALCAATTSNILGMALTPLLAGLLLHTH
                     GGFSAGAIGDIALQLLLPFIAGQVARPWIGDWVGRNRLLLGLVDRG"
     gene            741..1595
                     /locus_tag="VHX39_21545"
     CDS             741..1595
                     /locus_tag="VHX39_21545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3993763.1"
                     /translation="MLDPVQLESFLAVAQTRNFTEAGRRLGLRQSTVSQHISKLEQSS
                     GRRLFVRDTHSVVLTADGEAMTGFAQSILEANARARDYFAGSQVRGRVRFGTSEDFVS
                     SRLPELLRDFVRRHALVDLELTVGVSATLHEQLDAGELDLILAKRRAGDERGRLVWRD
                     RLTWIGGPDARIDPALPVPLILFAPPSITRSVALEALERVGRAWRIVCTSGSLSGLRA
                     AALAGLGITLHAQGLIPDGLAEVSAAARLPAAGDVEFVVQTARQGARGPAAELAQAIL
                     NNGDRLQR"
     gene            1989..>2526
                     /locus_tag="VHX39_21550"
     CDS             1989..>2526
                     /locus_tag="VHX39_21550"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3993764.1"
                     /translation="MIGGAEQPTRSQHKQIAQENFIESSNPFAIISGMRILIVEDDPD
                     IAKQLAGHLEQCGFLTHVEHTGEEGHYQGDVEAYDLVLLDIGLPDRDGFSILEQWRAS
                     GRTMPVIILTARTRKMDTIRGLKAGADDYIHKPYDLEEVVARIQANIRRHKGQLNAVM
                     RSGNVVFDSLAGKVSAAGS"
BASE COUNT          484 a          742 c          843 g          457 t
ORIGIN      
        1 agccgcgatc gaccaggccg agcagtagcc ggttacgccc aacccagtca ccgatccacg
       61 gccgggccac ctgaccggcg atgaacggca gtaacaattg cagcgcgata tcgcctatgg
      121 caccggcgga aaacccgcca tgcgtgtgca gcagcaagcc ggccagcagc ggtgtcaatg
      181 ccatgcccag aatattcgac gtggtcgccg cgcacagcgc tgccggtacg ttgcctcggg
      241 cgatcgaggt gaatgcgatg gaggactgca ccgtcgaggg caacatgcac atcagcaaaa
      301 gcccggacca taaggccggt ggcaggagtt gcggcgccag ggcacgcgcg gtcatgccca
      361 gtaccgggaa caacatgaag gaggccacca acacgacggc gtgcaggcgc caattctggg
      421 cgccggccag cgcggctcga ggcgccaact tcgcgccatg caggaagaac agcagggcaa
      481 tggcggcttt ggtcgcgtag ccgccagcga tcgttgcggc accatgcagc ggcgcgagcg
      541 aggccagtcc caccatcccg acgatcgcgg cgatgtaggg gtcgatgttc agccgggaga
      601 gcagggtgat tgggttcatc gcggcgatcc tcatgcgagc cccggttggg cgtgtgagca
      661 ccatagacgc ggcgcggttc attgtgaatt acgttgatcg atgttattgc catcacaaat
      721 catgatgaac ggcgcaacca atgctcgacc cggtccagct ggaaagcttt ctcgccgtag
      781 cccagacccg gaacttcact gaagccggac ggcggcttgg cttacggcag tcaaccgtca
      841 gccaacacat cagcaagctg gagcagtcct ctggccgacg gctgttcgtg cgtgacacgc
      901 actccgtggt actgaccgcg gatggggagg cgatgacagg gttcgctcaa tcgatcctgg
      961 aggcgaatgc ccgggcgcga gattacttcg cgggatctca ggtccgtggc cgggtgcggt
     1021 tcgggacctc ggaggatttc gtcagctccc gcctgccgga gttgctgcgc gacttcgttc
     1081 gccggcatgc gctggtcgat ctggagctga cagtgggggt cagcgcgaca ctgcatgagc
     1141 agctggatgc cggcgagctc gatctgatcc tggcgaagcg tcgggccggg gacgaaagag
     1201 ggcggctggt atggcgcgac cggctgacct ggatcggcgg gccggacgca cggatcgatc
     1261 ccgctctgcc ggtgccgctg atcctgtttg cgccaccaag tatcacgcgt tcggtggcgc
     1321 tggaggcatt ggaacgtgtt ggccgggcct ggcggatcgt gtgcaccagc ggcagtctga
     1381 gcgggctacg cgccgctgcc ttagctgggc tgggaataac gctgcacgcg caggggctga
     1441 ttccggatgg gctggcggag gtgtcggcgg ctgctcggtt gcccgcggcg ggcgatgtgg
     1501 agttcgtggt gcagacggca cggcaggggg cacggggccc ggcggcggaa ctggcgcagg
     1561 cgattttgaa caatggggat cggttgcaac ggtgacggcc gctgcgttca gggcagagtg
     1621 tcggttggca gcgaaacagc accaagaacg aagcgctttc ggtcgtctgg aggcgcggct
     1681 cgatgcctta tcgggcttgc gatgaggatg gtgctctcgg acgctgcagc gccgccggac
     1741 tctgcctcgt tgattcgctc ttcgtggtcg ggcagacagc ctgcatttgg gcaagccgaa
     1801 gcctggcacc atcatgtccc tgtgcgtcgg ctttgcacca ccacatgatg gccagtgccg
     1861 tgtcccagaa gccgccttca ccgcaacaat agctgttgcc catgatatat tgcgcgtctt
     1921 tgtcgccctg ctccgccttg tcgtgatatg cgatacgctg ggtgttctcg taagctattc
     1981 gattatcggt gattggcggc gccgaacagc cgaccagaag ccagcacaaa caaatcgcgc
     2041 aggaaaactt catcgaatct tccaacccct ttgctatcat aagcggcatg cgcatactga
     2101 tcgtagagga cgatcctgat atcgccaagc aactcgccgg ccatctggag cagtgcgggt
     2161 tcctcacgca tgtcgagcat accggcgagg aaggtcatta ccagggcgac gtggaagcct
     2221 atgatctggt attgctcgat atcggtctgc cggatcggga cggtttctcc atcctggaac
     2281 aatggcgcgc cagcggacgc accatgccgg tcattatcct aacggcccgc acccgcaaaa
     2341 tggataccat tcgtggcctg aaagcgggag cggatgatta catccataag ccttacgacc
     2401 ttgaggaagt ggtggcgcgt atccaggcca acatccgccg gcacaaagga cagctcaacg
     2461 cggtgatgcg ttcgggcaat gtcgtatttg acagtctcgc cggaaaggtt tcggccgccg
     2521 gcagct
//
LOCUS       DATAVD010001131         2529 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_294754, whole genome shotgun sequence.
ACCESSION   DATAVD010001131 DATAVD010000000
VERSION     DATAVD010001131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2529
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294754"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..731
                     /locus_tag="VHX39_21555"
     CDS             <1..731
                     /locus_tag="VHX39_21555"
                     /inference="COORDINATES: protein motif:HMM:NF018482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HEX3993765.1"
                     /translation="LVTRVALRIGIGLILSGKALIGQVSHRANLADFPARATRVRLFH
                     LGARLRYRAMFLRAFLMSVLSLPLICSAIAQPQPAPKTPPAPPPKKPAPAATAKPDGP
                     KLIGKFEDWIAATHPESGVPVCYAFTRVQTSIPTLSGRGRVVMTVTQRPSGRDSVAVE
                     SGFSFAQDATVTVQVDQTGLDFYTDQRAAFARDGHAAVVAFKAGSRAIARSPGPHDTT
                     VTDTFSLKGFTASYDAISKACPPK"
     gene            716..1906
                     /gene="rlmN"
                     /locus_tag="VHX39_21560"
     CDS             716..1906
                     /gene="rlmN"
                     /locus_tag="VHX39_21560"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010666886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEX3993766.1"
                     /translation="MSAEVDLMLTAAEREKILAYSAKFDPPGVTTADGRRDLVGMSRE
                     ELVAEVTSIGEAPFRVKQLWHWIYHQGVTDFARMSSIARPLQEKLAERFVIGRPEAAR
                     VQTSSDATRKFLFRFRDGQEAETVYIPDVEEDRGAVCISSQVGCTLSCRFCHTGTQTL
                     VRNLAAPEIVGQFMAARDSYGEWPSPKGDTPRLLSTIVLMGMGEPLYNYANVAKAMKI
                     VMDNEGIGLSRRRITLSTSGVVPMMDRCGSELGVCLAVSLHAVRDDLRDELVPLNRKY
                     PISELLAACRRYPGASNARRITFEYVMLKGVNDSEADARELVRLIAGMPAKVNLIPFN
                     PWPGTKFERSSRGAIERFSRIVNDAGYASPVRRPRGQDILAACGQLRTDGKRERAATD
                     SADA"
     gene            2253..>2529
                     /locus_tag="VHX39_21565"
     CDS             2253..>2529
                     /locus_tag="VHX39_21565"
                     /inference="COORDINATES: protein motif:HMM:NF024306.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEX3993767.1"
                     /translation="MKTIAQHVQQGIRTLGELQEALQTAMQLEFATIPPYLCAQWSIT
                     ADPSNVAPMIEDIVIQEMEHFALAGNILTAINGKPAVNNAAFVPHYPT"
BASE COUNT          471 a          727 c          807 g          524 t
ORIGIN      
        1 gcctcgtcac gcgggtcgcg ttgcggatag ggataggcct catactgagc ggcaaggcgc
       61 tgatcggtca ggtcagtcat cgcgcgaact tagcggattt cccagcccgt gcgacccggg
      121 tgcgcttgtt tcacctgggc gccaggctta ggtatcgggc catgttcctg cgcgcattcc
      181 tgatgtccgt tttgtcattg ccgctgattt gttcggcgat cgcgcagccg caaccggctc
      241 cgaagacgcc accggcgccg ccgccgaaaa agccggcacc agcagcgaca gcgaagcctg
      301 acgggcccaa actgatcggt aagttcgaag actggatcgc ggcgacacat ccggaatccg
      361 gggtgccggt ttgctatgcc ttcacccgcg tgcaaacttc gatcccgacg ctgtccgggc
      421 gaggccgtgt cgtcatgacg gtcactcagc gcccgtccgg gcgggattcg gtcgctgtgg
      481 aatccgggtt cagcttcgca caagatgcta cggtgaccgt gcaggtcgat cagacggggc
      541 ttgatttcta taccgaccag cgtgcggcgt ttgcgcgcga cggccacgca gcggtggttg
      601 cgttcaaggc cggcagccgg gcgattgccc gttcgcccgg acctcatgat acgaccgtta
      661 ccgacacgtt cagcctgaag ggtttcacgg cttcctacga tgcgatcagc aaagcatgtc
      721 cgccgaagta gacctgatgt tgaccgctgc cgaacgcgag aagatcctcg cttattcggc
      781 caaattcgat cctcccggtg tgaccacggc ggatgggcgg cgggatctgg tcggcatgtc
      841 gcgcgaagaa ttggttgccg aggtgacctc gatcggcgag gcaccgtttc gcgtcaagca
      901 actctggcac tggatttatc atcagggcgt caccgacttt gctcgaatgt cgagcattgc
      961 gcggcctctg caggagaaac tggcggaacg tttcgttatc ggccggccgg aagcggcgcg
     1021 ggtgcagacc agttcggacg cgacgaggaa atttctgttc cggtttcgcg acgggcagga
     1081 agcggagacg gtctacatcc cggatgtcga ggaagatcgt ggcgcggtct gcatttcctc
     1141 gcaggttggc tgcacgctgt cgtgccggtt ctgccatacc ggcacgcaaa ccctggtgcg
     1201 caatctggcg gcgccggaga tcgtcggcca gttcatggcg gcgcgcgatt cgtatggcga
     1261 atggccgagc ccgaaaggcg acacgccgcg tctgctgtcg accatcgtgc tgatgggtat
     1321 gggcgagccg ctgtataact atgccaatgt cgcgaaagcg atgaagatcg ttatggacaa
     1381 cgaagggatc ggactgtcgc ggcggcggat tactttgtcg acctccggtg tcgttcccat
     1441 gatggatcgt tgtggttcag aactgggggt ttgcctcgcg gtgtcgttgc atgcggtgcg
     1501 cgacgatttg cgcgacgaac tggtgccgtt gaaccgcaaa tatccaattt ccgaattgtt
     1561 ggccgcctgc cgccgttacc caggcgcatc gaatgcgcga cgcatcacgt tcgaatatgt
     1621 gatgttgaag ggcgtcaacg attccgaggc cgacgcgcgg gaactggtgc ggctgatcgc
     1681 cgggatgccg gccaaggtga acctgatccc gttcaacccg tggcccggaa cgaagttcga
     1741 gcgctccagc cgcggcgcaa tcgagcggtt ttcgcggatc gtcaatgacg cgggctacgc
     1801 ctcgccggta cggcggccgc ggggccagga tattttggcg gcatgcgggc aactgcggac
     1861 cgatgggaaa cgggagcggg ccgcaacgga ctcggccgac gcctgaggcg ggtgtcggtt
     1921 tgacgcgatc gttccggcta atggtcgccg accggccacg cgggattcct cggacggggc
     1981 gcttccgtta atcgagactt aatccacctg caattcccgg ttttgtgatc acgtcagccc
     2041 aggcccggcc tattggattg taggtggttc atgcatcccg aaatctgttg acggagatcc
     2101 tgctgcctgt cgggcctggt ttccggaagg tttggctttc gtgcaaccgt cgctctgttt
     2161 gcttgcaaaa cgttagcctt cgtgtcaatc tgaaccatcg tcgtggttca ggttaaaccg
     2221 gctcgttgat tgcaacaggg aaggcaaacc agatgaaaac gatagcccaa cacgttcaac
     2281 aggggattcg caccctcggt gagctgcagg aggcgttgca gacggcgatg caactggaat
     2341 ttgcaacaat accgccttat ctttgtgcac aatggtccat taccgctgat ccatccaacg
     2401 tcgccccgat gattgaggac atcgtcatac aggaaatgga gcatttcgct ttggccggaa
     2461 atatcctgac tgcgatcaac ggcaagccgg cggtcaacaa tgcggcattc gttccgcact
     2521 atccaacgc
//
LOCUS       DATAVD010001132         7132 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1226830, whole genome shotgun sequence.
ACCESSION   DATAVD010001132 DATAVD010000000
VERSION     DATAVD010001132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7132
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1226830"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..635
                     /locus_tag="VHX39_21570"
     CDS             <1..635
                     /locus_tag="VHX39_21570"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3993768.1"
                     /translation="DRVVAEITAAGGVAVANYDSVADAAGAEAIIACAARHFGRLDIL
                     VNNAGVNIVDRHWDKLTPENIEYMVQGNLTAALYCVTVALPFMRAQQDGVIIHTASMA
                     GRFIGGVSGPIYVAAKHGIVAMSHGLNMEECVNGIRSTVFLPGEVATPILDQRPNPVG
                     PEVRAKMVQPADCGDLIRYIANLPKHVVMNEVHLAPTWNRGYVANLQRRL"
     gene            648..1628
                     /locus_tag="VHX39_21575"
     CDS             648..1628
                     /locus_tag="VHX39_21575"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
                     /protein_id="HEX3993769.1"
                     /translation="MATNKRKVMLPHTMGQAGMDIVRARDDIETVIYPAGIKPADFLP
                     LLMDCAGIALSGTPYKQAEMDASPAMQVVARIGVGYDAVEVPALTRRKVPLMTAGTAN
                     STSVAEQAFHLMISLAKKHEALDALVKQGRWADRHGGLPMEISGKTVLIVGFGRIGTR
                     QAKRCNGFDMNVLVYDPYVDISVIGVAGCEKVTDLDAALPRADFVSIHCPKNPETIDM
                     FNAARFARMKPSAFIVNTARGGIINETDLHAALTRGQIAAAGLDVFDQEPTPADNPLL
                     KLPNVISSPHMAGVTTEAVAAMAVATARNILSVLDGTPNKENTINPEVYG"
     gene            1694..2266
                     /locus_tag="VHX39_21580"
     CDS             1694..2266
                     /locus_tag="VHX39_21580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973709.1"
                     /note="This protein belongs to a clade of uncharacterized
                     proteins related to peroxidases such as the
                     alkylhydroperoxidase AhpD; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxidase-related enzyme"
                     /protein_id="HEX3993770.1"
                     /translation="MPQPDHISALGVPDPSGLDDDLQVIWQKCVDRLGFVPNVFSTYS
                     LKPKRLRNFMAMYNEIMLSESGLSKLEREMIAVVVSSANRCYYCLVAHGAAVRALSGD
                     PELGEMMALNYRVAKLDARQRAMLDFAWKLTATPHLVDDADRDGLRAVGLTNEDIFDL
                     SETVAFFNLSNRMASATDMMPNREYHRQTR"
     gene            2292..2678
                     /locus_tag="VHX39_21585"
     CDS             2292..2678
                     /locus_tag="VHX39_21585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4345 domain-containing protein"
                     /protein_id="HEX3993771.1"
                     /translation="MEKRALQFVVAIGSLVPISAGSAGILLGPRLVGSAGIAAGDLDS
                     HFRYLSGLLLGIGIGFLSTIPRIETHGGRFRLLTGIVVVGGIGRLVSLLAAGPPSSAM
                     MAALGMELLVTPGLAIWQSRVAHRSN"
     gene            2881..3666
                     /locus_tag="VHX39_21590"
     CDS             2881..3666
                     /locus_tag="VHX39_21590"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX3993772.1"
                     /translation="MIRDVLKTIPGVGPFVRSARRVYREHSGAPDFRKILAETWLAGD
                     GIEIGALHFPLWVPQSARVRYVDRMPVADLRRHYPELAKENLVAVDIIDDGEKLATFK
                     DGSQDFIIANHFLEHTQNPIGTIGRLLQVLRDQGILYMAVPDKRSTFDVERPLTTLEH
                     LIRDYTEGPEWSRESHFREWVEIVNKTPAEARTAAMQQLMEMDYSIHFHVWTSATLLE
                     FLVALPKQFGFPFAIEAAVRNGSETICVLRREAAISATRVGKR"
     gene            complement(3716..4918)
                     /gene="pcaF"
                     /locus_tag="VHX39_21595"
     CDS             complement(3716..4918)
                     /gene="pcaF"
                     /locus_tag="VHX39_21595"
                     /EC_number="2.3.1.174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0019619 - 3,4-dihydroxybenzoate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoadipyl-CoA thiolase"
                     /protein_id="HEX3993773.1"
                     /translation="MAEAYICDYTRTPIGRYGGALRDVRTDDLAALPIKALMARNTSV
                     DWEALDDCIMGCANQAGEDNRNVARMAVLLAGLPTTVPGGTVNRLCGSGLDAVGTAAR
                     AIKTGEADLMLAGGVESMTRAPFVMGKATEAFSRSNEIFDTTIGWRFVNAQMKKVYGT
                     EAMPETGENVAEEFQISRADQDKFAYRSQMRAKAAQDSGFFAAEITPVTIKGRKGDTV
                     VDTDEHPRGDTTLEGLGKLRTPFRDPGTVTAGNASGVNDGAAALIIASEDAARRHGLT
                     PRARIVAMATAGVAPRIMGIGPAPAVQKLLSRLGMSIDEIDVIELNEAFASQGIAVLR
                     QLGLADDAEHVNMHGGAIALGHPLGMSGARLALTAVHALEQYGKQRAIATMCIGVGQG
                     IAALIERV"
     gene            complement(5144..5725)
                     /locus_tag="VHX39_21600"
     CDS             complement(5144..5725)
                     /locus_tag="VHX39_21600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993774.1"
                     /translation="MPADGAPDLNHLVPGRGCGTCDRCCIWLTIDDPELRKVQGHRCS
                     NLQADSSCAIYATRPRTCREFHCGFRRLDWVPDTLRPDLSSVLIGMQYDGPPTDPNRR
                     LGVSFSLLSDAALEAEGLAETVAAAIVAGMPVWLHVPGPPGHTAAAARVDTVMSEPVR
                     TGDLATVLHILRLGRAQAQKGAFEPIVLAGDRR"
     gene            complement(5725..5907)
                     /locus_tag="VHX39_21605"
     CDS             complement(5725..5907)
                     /locus_tag="VHX39_21605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993775.1"
                     /translation="MTAIAAHTETHTIAAHALPHAEIETRQLDEVIGGTNASGVMFLA
                     FTFKLVAVKTVSWAKD"
     gene            6180..6644
                     /locus_tag="VHX39_21610"
     CDS             6180..6644
                     /locus_tag="VHX39_21610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993776.1"
                     /translation="MISATHLIGIESKRFEPFRDARRVSFSDAYMQHDRGEHMNRYGK
                     VRDKLRSRDVRYHYLDAARLVEHAYWLVTEGRRIGRKPMLFYLFSEPTARGGHLITAE
                     DRKRHRDEIFDFAARVAGDEVAFGTTSYREFLGGATGRAEEHAAALIARFNP"
BASE COUNT         1340 a         2127 c         2260 g         1405 t
ORIGIN      
        1 cagaccgtgt ggtcgctgaa atcaccgcgg caggcggggt cgcggtcgcc aactacgaca
       61 gcgtggccga tgccgcaggt gccgaagcca tcattgcctg cgcggcgcgg catttcggcc
      121 ggctggatat tctggtgaac aatgccggcg tgaacattgt cgaccggcac tgggacaagc
      181 tgaccccgga aaacatcgaa tacatggtgc agggcaacct gaccgctgct ttgtattgcg
      241 tcacggtggc gctgccgttc atgcgtgcgc aacaggacgg ggtcatcatt cacacggcct
      301 cgatggcggg ccggttcatc ggcggggtga gtgggccgat ctacgtcgcc gccaaacacg
      361 gcatcgtggc gatgagtcac ggactgaaca tggaagaatg cgtcaacggc attcgctcca
      421 cggtgtttct gccgggcgag gtggcgacac cgatcctcga tcaacggccc aatccggtcg
      481 ggcccgaagt tcgggcaaag atggtgcagc cggcggattg cggcgatctg atccgttata
      541 ttgccaactt gccgaagcac gtggtgatga atgaggtgca cctcgcgccg acgtggaatc
      601 gcgggtatgt cgccaacctg caacgaaggc tttgagaggg aaccgtcatg gcaaccaata
      661 aacgcaaggt gatgctgccg cacacgatgg gtcaggcggg catggatatc gtgcgcgcgc
      721 gcgacgacat cgaaacggtg atctatccgg cggggatcaa accggctgat tttcttccgt
      781 tgctgatgga ttgcgcgggg atcgcactgt ccgggacgcc atacaagcag gccgaaatgg
      841 acgcctcgcc ggcgatgcag gtggtggcgc ggatcggtgt cggttacgac gcggtggagg
      901 tgccggcgct gacacgccga aaagtgccgt tgatgactgc gggcaccgcg aactctacca
      961 gcgtggcgga gcaggcgttc cacctgatga tctcgctggc gaagaaacac gaggcgttgg
     1021 atgcgctggt gaagcaaggc cgttgggcgg accggcacgg cgggctgccg atggaaatct
     1081 ccggcaagac ggtgctgatc gtgggtttcg gccggatcgg cacgcggcag gcgaaacgct
     1141 gtaacggctt cgacatgaac gtgctggttt acgaccctta tgtcgatatc agcgtgatcg
     1201 gcgtggcggg atgtgaaaag gtgaccgatt tggatgcggc gttgcctcgg gccgatttcg
     1261 tatcgatcca ttgcccgaag aacccggaaa ccatcgacat gttcaatgct gcgaggttcg
     1321 cccggatgaa gccgagtgcg ttcatcgtca acaccgcgcg cggtggcatc atcaacgaaa
     1381 ccgatttgca cgcggcgttg acccgtgggc aaatcgcggc cgccgggctt gatgtgttcg
     1441 atcaggaacc gacgccggcc gataatccgc tgctgaaatt gcccaacgtg atttcctcac
     1501 cgcatatggc cggtgtgaca accgaggccg tggcagcgat ggcggtggct acggcacgca
     1561 atatcctgag cgtgctggat ggaacaccga acaaggagaa cacgatcaac ccggaagtct
     1621 atgggtgatg tttgcctgac gccgacatgg tgcggcgagg gtcaggtagg ctctttctga
     1681 atggggatcg atcatgccgc aacccgatca catttctgcc ctcggtgtgc ctgacccgtc
     1741 cggcctcgac gacgacctgc aggttatctg gcagaagtgc gtagacaggc tcggctttgt
     1801 gccaaacgtg ttcagcacct acagcctgaa gccaaaacgg ctgcgcaact tcatggcgat
     1861 gtacaatgag atcatgctgt ccgagtccgg cctgtcgaag ctggagcggg agatgatcgc
     1921 tgtcgtcgtc tcgtcggcga accggtgcta ttactgtctt gtggcgcatg gcgccgcggt
     1981 gcgcgcttta tccggcgatc ccgaactggg tgagatgatg gcgctgaact accgcgtggc
     2041 aaagctggat gcgcggcagc gcgcgatgct cgattttgcc tggaagctga ccgcaacacc
     2101 gcatttggtg gatgacgcgg atcgggacgg actgcgcgct gtcggactga ccaatgagga
     2161 tatctttgac ctgtcggaga cggtggcgtt cttcaatttg tccaaccgga tggcttcggc
     2221 aaccgatatg atgccgaatc gggagtatca tcgtcagacg cggtaggtcg cctatcagtc
     2281 acaacggcgg gatggaaaag cgcgcactcc agtttgtggt ggcgatcgga agtcttgtcc
     2341 ccatcagtgc gggcagcgca gggatattgt tggggcctcg gttggtggga tcagccggca
     2401 ttgcggcggg tgatctggac agccatttcc gttatctgtc cggtctcctg ttggggatcg
     2461 gtatcggctt cctgtcgacc atcccgcgga tcgaaacgca tggcggacgc tttcggttgc
     2521 tcacgggcat cgtggtcgtg ggtggaattg gccggctggt gtcgctgttg gcagcaggac
     2581 cgccatcgtc agcgatgatg gcggcgcttg gtatggagct gcttgtgaca cctggtctcg
     2641 ccatttggca aagtcgcgtg gcgcacaggt caaactgatc cgcacggcga ggccggccgg
     2701 gagtcgacgc gctcatcgga tgccagctaa gttgcggccg tcgggggtta acacatcgcg
     2761 gaggcaacga ctccgcccag atcgtcgatc ggacgcacca gctacttcag cccaccccat
     2821 gacgttcacc gcaacccaga ggtcaacgac catgccaggt ttctgcagcg agcaaccaac
     2881 atgatccgag atgtcctgaa aacgatccct ggcgtggggc cattcgtgcg gtccgctcgg
     2941 cgcgtgtacc gggaacattc cggcgcacct gactttcgca agatcctggc ggaaacctgg
     3001 ttggcgggcg acggcattga aattggcgcg ctgcactttc cgctttgggt gccgcagtct
     3061 gcccgcgtgc gctacgtcga ccgcatgccg gttgcggact tgcggcggca ctatcccgag
     3121 cttgccaagg aaaacctggt tgcggtcgat atcatcgatg acggcgagaa actggcgaca
     3181 ttcaaggacg ggtcgcagga ttttatcatc gccaatcact tcctggagca cacgcagaat
     3241 ccgatcggaa ccatcggacg gttgctccag gtgctacgcg atcagggcat tctttacatg
     3301 gcggtgccag acaagcgctc tacttttgat gtggagcggc cactgaccac ccttgaacat
     3361 ctcatccgcg attacacgga ggggcccgaa tggtcgcgtg aaagccattt tcgcgagtgg
     3421 gtcgaaatcg tcaataaaac accggccgaa gctcggacgg cagccatgca gcagcttatg
     3481 gagatggatt acagcatcca ctttcacgtc tggacctccg ccacgctgct ggaattcctg
     3541 gttgctctgc caaaacaatt cggctttccg tttgccatcg aggcggcagt gcgcaacggg
     3601 tcggagacca tttgtgtgct gcggcgggag gccgccattt cggcgacgcg ggtcggaaaa
     3661 cgatagccgg cggtacggcc ccggcgcttg cacgccgggg accatgctct atccgtcaca
     3721 cccgctcgat cagcgccgca atcccctgcc ccacgccaat gcacatcgtg gcgatcgcgc
     3781 gctgcttgcc gtactgctcg agcgcatgca ccgcggtcag cgcaagccgt gcgcctgaca
     3841 tccccagcgg atgccccagg gcgatcgcgc cgccgtgcat gttcacatgc tcggcatcgt
     3901 ccgccagccc gagttgccgc agcaccgcga tgccctgcga ggcaaacgct tcgttcagtt
     3961 cgatcacgtc gatttcgtcg atcgacatcc ccagccgcga caacaacttc tgcaccgccg
     4021 gtgccggtcc aatgcccatg atccgcggcg ccacacctgc cgtcgccatc gccacaatcc
     4081 gggccctcgg cgtcaggcca tgccggcgcg ccgcgtcctc ggacgcgatg atcagcgctg
     4141 ctgccccgtc gttcacgccg gaagcattgc ccgccgtcac cgtccccgga tcgcggaacg
     4201 gcgtgcgcag cttccccagt ccttccagcg tcgtgtcgcc gcgcggatgc tcatcggtgt
     4261 caacgaccgt gtcgccctta cggcccttga tcgtcaccgg ggtaatttcg gcggcaaaga
     4321 acccgctgtc ctgcgccgcc ttggcccgca tctggctgcg atacgcaaac ttatcctgat
     4381 cggcccgcga aatctgaaat tcttccgcca cgttctcgcc ggtttccggc atcgcttcgg
     4441 tgccgtacac ttttttcatc tgtgcgttaa cgaaacgcca gccgatcgtg gtgtcgaaaa
     4501 tctcgttact gcgcgagaac gcctcggtcg ccttgcccat cacgaacggg gctcgggtca
     4561 tgctctcgac cccgccggcg agcatcagat cggcctcgcc ggtcttgatc gcccgcgctg
     4621 ccgtgccgac cgcgtccagg cccgagccgc acagccggtt cacggtgcca cccggtaccg
     4681 tggtcggcag gcccgccagc agcactgcca tgcgggcgac gttgcggttg tcctcgccgg
     4741 cctggttggc gcagcccatg atgcaatcgt cgagcgcttc ccagtcgacc gaggtgttgc
     4801 gcgccatcag tgccttgatc ggcagcgcgg cgaggtcgtc ggtacgcaca tcgcgcaagg
     4861 caccgccgta acggccgatc ggcgtgcggg tgtaatcgca gatataggct tcggccatgt
     4921 cggtatccct cccggtttgc ggttggccgc ttgtactacg cggcttccgg gcgggaaaga
     4981 tgcggtggtt tcgggtaatt tctcggtctg aatgtcgggt ttgggtggga accgcacatt
     5041 cgagcacgcg tttctggtgg ctgaaatctg gccagaaacc cggctggccg actattagcc
     5101 tgatttcacc gatgcatgtt ggcccgggca gcgggtaacc gcatcaccgc ctgtccccag
     5161 cgagcacgat aggttcgaac gcgcccttct gggcctgagc acgcccgaga cgaagaatat
     5221 gcagaacggt cgcgagatct ccggtccgca cgggctcgct cataactgtg tcgacgcggg
     5281 cggcggcggc tgtgtggcct ggcgggccgg gcacatgcag ccagaccggc atgccggcga
     5341 caatggccgc agcgactgtt tccgcgaggc cctccgcctc caacgcggca tcgctcagca
     5401 gtgagaacga cacgccgagg cgccggttcg ggtcggtcgg cggcccgtca tattgcattc
     5461 cgatcagcac cgaggacaga tccggccgca gcgtgtcggg gacccagtcc aggcggcgga
     5521 aaccgcaatg gaactcccta catgtgcgcg gccttgtcgc gtaaatcgcg cagctactgt
     5581 ccgcttgcag gttgctgcac cggtgaccct gcaccttgcg gagttccggg tcgtcgatcg
     5641 tcagccagat gcagcaacgg tcgcaggtgc cgcagcctcg tccaggaacc aggtggttga
     5701 ggtcgggtgc accatcggcg ggcatcaatc tttagcccag ctcacggtct tcaccgccac
     5761 cagcttgaac gtgaaggcga ggaacataac gccgctggcg ttggtgccgc cgatcacctc
     5821 gtcaagctgc cgggtctcga tctcggcgtg gggtaacgcg tgcgcggcga ttgtatgggt
     5881 ttcggtgtgc gctgcgatag cggtcattgt agcctccata atgttggcga tttccacagc
     5941 gtgacctgag gttcgtcaga tcagcggctc atttggtttg gttgctttta tgtcctttca
     6001 agacatccac gtcatgcccc cggctcgccc gggcgtctgt gctgcgcggc acaggtgacg
     6061 ccggccggca agtccgaagg cccggcgccg aggccgctgg gtcacccaaa cagatcacgg
     6121 ttgaatattg cgcgcggttc ccgtgggccg gaggaaagca tccatggctc gatgccgcgt
     6181 tgatcagcgc cacccacctg attggcatcg agtccaaaag gtttgagcca ttccgcgacg
     6241 ccaggcgtgt gagcttctcc gacgcatata tgcagcacga ccggggcgag catatgaacc
     6301 gatatggcaa agtccgcgac aaactccgat cacgtgacgt gcgttatcac tatctcgatg
     6361 cggcacgact cgtggaacat gcgtattggc tcgttaccga gggaaggcgg atcgggcgga
     6421 aaccgatgct cttttatttg ttctccgaac cgaccgctcg cggcggccat ctgattacgg
     6481 cggaggatcg caaacggcac cgagacgaga tcttcgactt cgcggcacgt gtggctgggg
     6541 atgaggtcgc attcggcaca acgagctatc gcgaatttct gggcggcgct acaggccggg
     6601 cggaggaaca cgccgccgca ttgatcgccc gtttcaatcc gtaaggtgct gtgtgagcaa
     6661 tggagggaac cgtacatttc agcttgtctt cgacacgcgc tccggacgtc cacttgcaat
     6721 cccggagcgg tgagcggcaa catcacatcg gcgacataat tctatatgtt aagtcgatgg
     6781 gacgccagtt tcagagttgt gagtgctttg ccatggcctt ttggcaaatc tgaaggcatt
     6841 gtagctcgaa gtactacctc ggggcagcac aatgagaggg atatttgagt ggcttgcatc
     6901 caggacacga cgggaaattc tcgggttatg cttcagctgt gtcatcgccg gaattgcagg
     6961 ggtctgggct cttgccacat tcgagcccac gagaaacgat gctgaacatc ctgaggcgtc
     7021 agctagcctg gcaatcagtc cgacgaacag gagggcaatt gaaagcaggt caaatgccaa
     7081 cggcatcgtt ccgagagcaa agccatcggc tcaaattaaa atgatttacg ac
//
LOCUS       DATAVD010001133         3769 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3085412, whole genome shotgun sequence.
ACCESSION   DATAVD010001133 DATAVD010000000
VERSION     DATAVD010001133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3769
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3085412"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..1676)
                     /locus_tag="VHX39_21615"
     CDS             complement(81..1676)
                     /locus_tag="VHX39_21615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993777.1"
                     /translation="MPAISSDRLAADTSGAAPRNAAFWCALAVLCLAMLAPLTLADVP
                     PLLDYPNHLARLFVLASLPGDPVLAQFYMPHWAVIPNLALDLTVPPLLRIFPVHLVGR
                     AVIALTVILPVLGSVAYHRALTGRLSYWPLGSALFAYNGLLLKGFLNFIVSVGLAMLL
                     AAAWIEWRDRRPAFAIVTCVAGATALFFCHLGGLLLFAVLIGSHELLIMRTDPVGPGL
                     FRERIPAIVAVFAIPLALYAGSDLGHMPDHAQIRTIAGKAHAALTPMMNYCWPLDLVT
                     AVLCAGTIALCLARRWCAMKLRAVTAIIVLLVLFAVSPDAFKGGFDIDTRFIVMATFI
                     VPAALVPVALPRRAAWTIGLGFLAEFSVRMIVLAAVWHDWAGDLAAFRTVIAQVQPGD
                     VVLTVRLSKDGEQNPWAATARRLSDGTVLDAHLPALLMIEHRAWWPFLFDNQSQQPIE
                     TREPFRTLAELIDASPDPIALLASNAPEARLVTHVLLWGHGPGRIAPQGLKLLAANSE
                     AALFAVEHGAIRPPPPLAPPPDH"
     gene            complement(1760..2914)
                     /locus_tag="VHX39_21620"
     CDS             complement(1760..2914)
                     /locus_tag="VHX39_21620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HEX3993778.1"
                     /translation="MPVTNASVPFLDLPAQQARIRDDLRRRLDAVLAHCQFVLGPEVA
                     ELERELAQFCRAKHCVSVSSGTDALQIAMMAEDIGRGDAVFLPAFTYTATAEVPLVLG
                     ATPVFVDVDPRTFQIDPTHLRHRIGEVRAAGKLRPRAVIGVDLFGQPADWPALSAIAV
                     TEGLFTIDDLAQSFGASLHGRPLGSQADVTATSFFPSKPLGAYGDGGALFTESDDRAE
                     LYRSLRTHGEGKTRYEVLRTGMNGRLDSIQAAVLLAKLTVFPEELVAREKIATYYDHR
                     LGNSLTIPARVPNSTAAWAIYSVLLPEGCDRATVQNTLRADGVPTAIYYPRPLHRQPA
                     YREHHDGTALPVSDHLADRILALPIHPDMDEAAASHVCDALVAAVASGKS"
     gene            complement(3038..>3769)
                     /locus_tag="VHX39_21625"
     CDS             complement(3038..>3769)
                     /locus_tag="VHX39_21625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993779.1"
                     /translation="PGLVVLLALRGCWHDVPPSSFTIPGSGEMGNGTEVAKILDSEKV
                     ASPGAIGPRRAVILITIDTSLYKGEKAIHAIFDISTTDYMVSGERFGYVTHIDNNNRS
                     RGTITGYGSKFVTCTPNVGRITLFQAPGQRLDYILSFPAGYVNFILKERDSDAISPIF
                     LNRRTRVFDYRVPAYGVGGPIDLGIFRIQGQEGDTSVSADDERAVSGTMHWGEIRFRT
                     APMVYEIVPPPVVFETQCLGYPKFH"
BASE COUNT          854 a         1110 c         1134 g          671 t
ORIGIN      
        1 accattggcc ggagggcatc tgatgttcgc cggcgaggcc tgcaacgttc cctatgcggg
       61 aactttggcg ggtgcgtgga tcagtggtca ggcggcggcg cgagcggcgg cggtggcctg
      121 atcgccccat gttccacagc gaataaggcc gcttcactgt ttgcggccag cagtttcaaa
      181 ccctgaggcg cgatccggcc tggcccgtga ccccagagca gcacgtgcgt caccaaccgc
      241 gcctcgggcg cattgctcgc aaggagcgcg atcgggtcgg gggaggcatc tatcagttcg
      301 gccaatgtcc gaaatggttc gcgcgtttcg atcggttgct gggattggtt gtcgaacaga
      361 aacggccacc aggctcggtg ttcgatcatc agcaacgccg ggagatgggc atcgaggaca
      421 gtgccatccg acaggcgtcg cgcggttgcg gcccaggggt tttgttcccc gtccttcgac
      481 aggcgcaccg tcagcaccac gtcgcctggc tgcacctgag cgatcaccgt ccggaacgca
      541 gcgaggtctc ccgcccagtc gtgccaaacc gccgcgagga caatcatccg cacgctaaac
      601 tcagccagaa atccgagacc gatcgtccag gcggctcgac ggggcaaagc gaccggcacc
      661 agcgcagccg gaacgatgaa agtcgccatg acgataaagc gggtgtcgat gtcgaacccg
      721 cccttgaacg cgtcgggtga gacagcgaac agcaccagca agacgatgat cgccgttacc
      781 gcgcgcaact tcattgcgca ccaacgacga gccagacaaa gcgcaatggt tccggcgcag
      841 agtactgcgg tgacaagatc gagtggccag caataattca tcatcggggt caacgcagcg
      901 tgcgccttgc cggcgattgt gcgaatctgt gcgtggtccg gcatatgacc aagatcggag
      961 ccggcatata gcgccaacgg aatcgcgaac accgcgacga ttgccgggat ccgttcgcgg
     1021 aagaggccag gtccaaccgg atccgttcgc atgatcaaca attcatgact gccgatcagg
     1081 accgcgaaca acagcaatcc acccagatgg cagaagaaca gtgccgtcgc gcccgcgaca
     1141 caggttacga tcgcgaaggc gggccggcgg tcacgccact caatccaggc ggcggcgagc
     1201 aacattgcca gtcccacgga cacgataaaa ttcagaaaac ccttgagcag gagaccatta
     1261 taagcgaaca gcgcggagcc cagaggccag tatgacaagc ggccggttag cgctcggtga
     1321 taggcgacgg agccaagtac cgggagtatg acggtcaggg caatgactgc tcggccaacg
     1381 agatgaaccg ggaaaatccg taacaatggc ggcaccgtaa ggtcgagcgc caaattcgga
     1441 atgacggccc aatgcggcat gtaaaattgc gcgagcaccg gatcgcctgg caaagatgcc
     1501 aggacgaaca atcgcgccaa atggttggga taatccagca gcggcggcac atcggcgagg
     1561 gtaagcgggg ccagcattgc caggcacagc acggccaatg cgcaccagaa ggcggcgttg
     1621 cgtggcgcgg cgccggaagt gtcggccgcc aaacgatcag aggaaattgc tggcattgcc
     1681 gaaaccaacg caagcccgac cgccgttcgc aagggcaagc gcgcccgtgc cgcacggctc
     1741 actcatagtt ggtttattgt caggacttac cggatgcgac agcggcaacg agagcatcgc
     1801 acacatgaga cgccgcagcc tcatccatgt cgggatgaat gggcaaggcg aggatgcgat
     1861 cggccaaatg atccgagacc ggcagcgcag ttccatcatg gtgctcgcga taggctggtt
     1921 ggcgatgcag tggccgcggg taataaatgg ccgttggcac tccgtccgcc cgcaaggtgt
     1981 tctgtaccgt ggcccgatca catccttccg gtagcaatac ggaatagatt gcccaggcgg
     2041 cggtgctgtt gggcacgcgg gcgggtatgg tgagggaatt gccaagacgg tgatcataat
     2101 acgtggcgat cttttcgcgc gcgacgagtt cttcgggaaa tacggtcagt tttgcaagca
     2161 gaactgccgc ctggatggaa tcgagacggc cattcattcc ggttcggagg acttcgtaac
     2221 gggtcttacc ttcaccatgc gtgcgcaaac tacggtaaag ctccgcgcgg tcgtcgcttt
     2281 cggtgaacag tgcgcccccg tcgccatagg ctcccaaggg cttcgacgga aagaacgacg
     2341 ttgcagtcac gtcggcctgc gagcctagtg gacgaccgtg caatgaggcg ccgaaacttt
     2401 gcgcaagatc gtcgatcgtg aacaagcctt cggtcacggc gatcgccgaa agcgcaggcc
     2461 agtccgctgg ctgaccgaac agatcgacgc cgatcaccgc gcgcggccgc agcttgccgg
     2521 cagctcggac ttcgccgatc cgatgccgca aatgcgttgg gtcaatttga aacgtgcgcg
     2581 gatcgacatc gacgaatacc ggggtcgcac caagtaccag gggcacctcc gcagtggcgg
     2641 tataggtaaa ggccggcaga aataccgcgt cgcctctgcc gatatcttcc gccatcatgg
     2701 cgatttgcag tgcgtccgta ccggagctga cggatacgca atgctttgcc cgacaaaact
     2761 gtgcaagttc gcgttccagt tccgccacct cggggccaag cacgaactga caatgcgcca
     2821 gcaccgcatc gaggcggcgc cgcagatcgt ccctgatccg tgcctgttgc gcgggcagat
     2881 cgagaaacgg cacggaagcg ttcgtcactg gcatatacta ttgactccaa actttacctg
     2941 tcaccgggct gacctcgccg gtgcgaacat acctgtcttg tggtcagcca ccgaacatgt
     3001 tttcgatcac tctgccggct ttaacaacac tgccacccta gtggaacttc ggataaccaa
     3061 gacactgcgt ttcaaagacg actggtggcg ggacgatctc gtaaaccatc ggcgcggtgc
     3121 gaaacctgat ttcaccccaa tgcattgttc cgctgacggc ccgttcatca tcggccgaaa
     3181 ccgacgtatc gccctcttgg ccttggatgc ggaatattcc gaggtcgatc ggtccgccga
     3241 cgccatacgc tggaacgcga taatcgaaaa ctctggtacg tcgattcaaa aaaattggac
     3301 tgatcgcatc agagtcacgc tccttcaata tgaagttcac atatccggcc ggaaatgata
     3361 gaatataatc gagccgctgc cccggtgcct gaaacagcgt gattcgaccg acgttgggcg
     3421 tacatgtcac aaacttcgag ccatagccgg taatggttcc acgcgatcga ttgttattat
     3481 caatatgggt gacgtagcca aatcgctcac ccgaaaccat ataatccgtg gtggaaatat
     3541 cgaagatggc atgaatcgcc ttttcgcctt tgtataacga cgtgtcgatt gtgatcagta
     3601 tgacggcgcg ccggggtccg attgcaccag gcgaggccac cttctcgctg tccaggatct
     3661 tggcaacttc agtgccattc cccatttccc cgcttccagg aatcgtgaaa ctgctgggag
     3721 gaacgtcgtg ccagcatccg cgcagggcaa gcagaacgac aaggcctgg
//
LOCUS       DATAVD010001134         7803 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1227045, whole genome shotgun sequence.
ACCESSION   DATAVD010001134 DATAVD010000000
VERSION     DATAVD010001134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7803
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1227045"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VHX39_21630"
     CDS             <1..298
                     /locus_tag="VHX39_21630"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3993780.1"
                     /translation="LNGLPVVAHVPLAQGMLAANEALATIGRRYNASAAQVALAWLLD
                     QRDVAIIPKAERRESQLANLEALSLRLDDADRAVIAALPKTLRCVNPPFAPVWD"
     gene            complement(295..981)
                     /locus_tag="VHX39_21635"
     CDS             complement(295..981)
                     /locus_tag="VHX39_21635"
                     /inference="COORDINATES: protein motif:HMM:NF015682.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HEX3993781.1"
                     /translation="MLENPPLLTIHRGFRRPDKALIEAFRGAQTSHLADAMDGRGALD
                     YRIKPLDPANASFVGPALTAFAYPADIAAMFGALAEAQPGDVLVVANDAYTRTAVLGD
                     IAAGMMKNKGIAAFVTDGLARDKAGVVATGLPVFCQGIQPNSPAMNGPGVVGAPVTLG
                     DVHVEPGDVIVGDADGVVVVPARRLRQVLDRLAQVRAAEARTIALVEQGATMAAGALR
                     IIENAVIIET"
     gene            complement(1013..1762)
                     /locus_tag="VHX39_21640"
     CDS             complement(1013..1762)
                     /locus_tag="VHX39_21640"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3993782.1"
                     /translation="MSKDFDLTGKVCVVTGAGRGIGRGMAEGLARHGATVVLSGRTQA
                     TLEETAAAIGDNATVQTADVSKEPDVLALRDAVLQRHGKIDVLVNNAGVNAIFKTIER
                     TTLAEWQDIIDVNLTGVFLCCKHIGGAIGEGGSVINVSSVAGHGGLPRSGPYCASKGG
                     VEMFTKALALDWAKRKVRVNTLAPGWVDTDLTHGLLEHDVHGKRLLDRTPLGRFATPL
                     DMAGGVVFLASDASAFMTGQSLVIDGGWGAE"
     gene            complement(1759..2928)
                     /locus_tag="VHX39_21645"
     CDS             complement(1759..2928)
                     /locus_tag="VHX39_21645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3993783.1"
                     /translation="MDFSLTPELQELQQRTRAFIHDKIIPLEGDGRQTHHGPTEDFRH
                     ELVALAAAEGLVAPHVGVEYGGMGLSHVGKAVVFEEAGYSLLGPVAMHIFAPDEGNMH
                     LLEAVASPEQKDRWLRPLAAGKTRSCFCMTEPAPGAGSDPSAMLTTAVKDGNHYVING
                     DKWFITGAVGAAFAIIMAKDEDGHATMFLADMDTPGIEIVRAMDSLDSAFAGGHAVVR
                     FTNVRVPAGDILGEPGKGFRYAQVRLAPARLTHCMRWLGAAKRAHKIATDYALKREVF
                     GSKLIGHEGVGFMLADNEMDIRMSRLSILHTAWLLDQGERGGTESSMAKVFVSEAVWR
                     VVDRCVQVLGGQGVTGETLVARIFNEVRGFRIYDGPSEVHRWSLAQRIARNGANW"
     gene            complement(2928..3992)
                     /locus_tag="VHX39_21650"
     CDS             complement(2928..3992)
                     /locus_tag="VHX39_21650"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HEX3993784.1"
                     /translation="MPTETGLRSAAESVPLDWSKVRTYLATHGRHLDAEPPPRQFAGG
                     LANLNYLIHLDGKPAVLRRPPMGELPAGAFDMAREFRILSRLPDALPFIARGLHLCDD
                     PSIIGQRFQIIEYRPGLVIREHLPPDLAHRPDVGVRLSRMLLQTIAAIHAVDTKAVGL
                     DDLGRPEGFLARGVSGWRKRGLAAMQEGTESLHNDVGLWLEQHIVPDGQPSLLHNDFK
                     LNNIILDPDDFSPRAVVDWDQGTRGDPLFDFATLLSYWIHADDPPAMHDMEQMPAVEA
                     CLCSRQNAVAEYARISGSDMSNFLFHRVLAMYKLSVIFLQLGLRYRSGATQEPRYAPL
                     TGLGTGILEFTHEIAQGRAF"
     gene            complement(4050..6008)
                     /locus_tag="VHX39_21655"
     CDS             complement(4050..6008)
                     /locus_tag="VHX39_21655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl/propionyl/methylcrotonyl-CoA carboxylase
                     subunit alpha"
                     /protein_id="HEX3993785.1"
                     /translation="MFRSLLIANRGEIACRVARTARRMGIETIAVYSEADARALHVQA
                     TDRAYPIGPAPARESYLNIPRIIETALAAGADAIHPGYGFLSENPAFADACTEAGIVF
                     VGPPASAMRAMGSKSAAKALMEKSAVPLLPGYHGDRQDAAFLEDQAARIGFPVVIKAV
                     SGGGGRGMRVVASATEFAAALESAQQEAASAFGDDRVLVERYLQRPRHIEVQVFADTH
                     GNAVHLFERDCSAQRRHQKVLEEAPAPGLSAAQREQMGSAAVAAAKAVGYVGAGTVEF
                     VADAGGFFFLEMNTRLQVEHPVTEMITGFDLVEWQLRVAAGEPLSVAQSAITLTGHAI
                     EARIYAEDPARDFAPSVGRLALFQTPIETDGVRVDTGFATGDTVSIHYDAMLAKLICY
                     GSTRDAALRRMAQALADCSVAGVASNLDLLRRIVTHPDFAAGGIDTGFIAREGATLLA
                     PQTTPPVEVLAIAALTVLHAEPPASDDPWDTTDLWWLNTAPTRVLEFTDGETSFPVSV
                     TRDGSGWRIGDILGHAERLDQGRLRVSLNGVWRTVGATLDQHVVTLRDNGLTWRLTLP
                     DPLAAADEEEDAGDRLVAPIPGLVTQVMTAVGDHVVRGQVLVVLEAMKTVFRLSAPTD
                     TVVASVSCATGEMVQEGQMLVGFGEAAD"
     gene            complement(6014..7606)
                     /locus_tag="VHX39_21660"
     CDS             complement(6014..7606)
                     /locus_tag="VHX39_21660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX3993786.1"
                     /translation="MAAIRSDISPRSPDFTANAEAMRGLVTDLRARVADIAQGGGTTA
                     RDRHIARGKLLPRDRVAALIDPGSPFLEFSQLAAFGLYGGDVPAAGIVTGIGRVSGRE
                     CVIVANDATVKGGTYFPMTVKKHLRAQEIARANGLPCLYLVDSGGAFLPMQDEIFPDR
                     NHFGRIFFNQANMSAEGIPQIAVVMGSCTAGGAYVPAMSDESIIVRKQGTIFLAGPPL
                     VQAATGEIVSAEDLGGADVHARTSGVVDHYARNDHHALSICRRIVAGLNRVKPAVLQR
                     RTPEPPRYDPTEMHGVVPADLRTPYDVREVIARIVDGSDFDEFKRLYGTTLVCGFAHL
                     FGYPIGIVANNGILFSESSLKGAHFIELCSQRNIPLLFLQNITGFMVGRKYESGGIAK
                     DGAKLVTAVATTAVPKITMIIGGSYGAGNYGMCGRAYDPRFLFMWPNARISVMGGEQA
                     AGVLTTVRSGSADWTKEQEEAFKAPIRMQYDTQGHPYYASARVWDDGIIDPADSRRVL
                     GLALSAALNKSLQDTRFGVFRM"
     gene            complement(7648..>7803)
                     /locus_tag="VHX39_21665"
     CDS             complement(7648..>7803)
                     /locus_tag="VHX39_21665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3993787.1"
                     /translation="LEAIQALGGNGYINDYPTGRLLRDAKLYEIGAGTSEIRRMLIGR
                     ELFAETA"
BASE COUNT         1369 a         2469 c         2533 g         1432 t
ORIGIN      
        1 tttgaacggt cttccggtgg ttgcccatgt gccgctggca caggggatgt tggcggctaa
       61 tgaggcgttg gcgacgatcg gtcgtcgtta caatgccagt gcggcgcagg tggcactggc
      121 ctggctgctg gaccaacgag atgtcgccat catcccgaaa gccgaacggc gtgaaagcca
      181 attggcgaac ctcgaggctc tgtcgttgcg gttggacgac gcggatcgtg cggttattgc
      241 cgcgctgccc aagacattgc gctgcgtgaa cccgcccttt gccccggtgt gggactaagt
      301 ttcgatgatc actgcattct cgattatccg cagtgccccg gctgccattg tggcgccctg
      361 ttccaccagc gcgatcgtcc gcgcttcggc ggcccggacc tgcgccaggc gatcgagcac
      421 ctggcgcaga cgcctggctg gcaccaccac gacaccgtcg gcgtcgccca cgatgacgtc
      481 gcctggttcc acatggacat ccccaagcgt gaccggggcg ccgaccacgc ccggcccgtt
      541 cattgccggg gaatttggct ggattccctg gcagaagacc ggcagccccg tcgcaacgac
      601 ccccgccttg tcgcgcgcca ggccatccgt cacgaacgcc gcgatccctt tattcttcat
      661 catgccggca gcgatatcgc cgagcactgc tgtgcgggtg taggcgtcat ttgcgacaac
      721 gaggacgtcg cccggctgtg cttccgccag cgcaccgaac atcgcggcga tatcggctgg
      781 ataggcgaac gcggtcaggg cgggcccgac aaacgacgcg ttcgcgggat cgagtggctt
      841 gatccggtaa tccagcgcgc cgcggccgtc cattgcatcc gccagatgcg aagtctgggc
      901 accacggaac gcctctatca aggctttgtc ggggcgacga aacccgcggt ggatcgtcag
      961 aagcggtggg ttttcaagca tcttgttttc ttccccctgg tctgtctttc ggttattcgg
     1021 cgccccatcc gccgtcgatg acaaggctct gtccggtcat gaacgccgag gcatcgctgg
     1081 caaggaatac cacgccgccc gccatatcca gcggtgtcgc gaagcgcccg agcggggtgc
     1141 ggtccagaag gcgcttgccg tggacgtcgt gttccagaag cccatgcgtc aagtcagtat
     1201 cgacccagcc gggcgcgagc gtgttgaccc gcacttttcg ctttgcccaa tccagcgcga
     1261 gggccttggt gaacatctcg acgccgccct tggatgcaca atagggcccg gaccgaggca
     1321 atccgccatg accggcgacg gaactgacat taatgaccga accgccttcg ccgatcgcgc
     1381 cgccaatgtg cttgcagcac aggaacacgc ccgtcaggtt gacgtctatg atgtcctgcc
     1441 attcggcgag cgtggtgcgc tcgatcgttt tgaagatcgc gttcacgccg gcgttgttga
     1501 caaggacgtc gatttttccg tggcgctgca acacggcgtc gcgcagggcg aggacgtcgg
     1561 gttccttgga tacatcagcg gtctgaacgg ttgcgttgtc gccgatcgcg gcggcagttt
     1621 cttccaatgt ggcttgggtt cttccgctga gcacgaccgt ggcgccgtgg cgggcgaggc
     1681 cttcggccat gccgcggcca atgccgcgcc cggcgccggt gacgacgcag accttgccgg
     1741 tcagatcgaa atccttgctc accagttggc tccattgcgg gcgatgcgtt gcgcgaggct
     1801 ccaacgatgc acttccgacg ggccgtcgta gatgcggaag ccgcggactt cgttgaagat
     1861 acgggcgacg agggtttcgc cggtcacgcc ctgaccgccc agcacctgca cgcaacgatc
     1921 gacgacacgc cagaccgctt ccgacacaaa cactttcgcc atcgaggatt cggtgccgcc
     1981 gcgttcgcct tgatccagca gccaggcggt gtgcaggatg gacagccggc tcatgcggat
     2041 atccatttcg ttgtcggcga gcatgaagcc gacgccttcg tggccgatca gctttgagcc
     2101 gaacacttct cgcttcaacg catagtcggt ggcgatcttg tgcgcacgtt ttgcggcacc
     2161 gagccagcgc atgcaatggg tgaggcgggc gggggcgagg cgaacctggg cgtaacgaaa
     2221 tcccttgccg ggttcaccga ggatatcgcc ggcgggaacg cggacgttgg tgaatcgcac
     2281 gacggcatgg ccgccggcga aggcgctgtc caagctgtcc atcgctcgaa cgatctcgat
     2341 ccccggcgtg tccatgtcgg ccaggaacat cgttgcgtgg ccgtcctcat cctttgccat
     2401 gatgatggcg aaggctgcgc cgaccgcgcc cgtgatgaac catttatcgc cgttgatgac
     2461 gtaatggttg ccgtccttca ccgctgtcgt cagcatcgcc gacgggtccg atccggcgcc
     2521 gggtgcgggt tccgtcatgc agaagcagga tcgcgttttg ccggcggcca agggccgtag
     2581 ccagcgatcc ttctgttcgg gggaagcgac agcctccagc aggtgcatgt tgccttcatc
     2641 gggcgcgaag atgtgcatcg cgacgggacc gagcagggaa tagccggctt cctcaaagac
     2701 cacggccttg ccgacgtggg acaggcccat gccgccgtat tcgacaccga catggggcgc
     2761 gacgaggccc tcggcggcgg ccagggcaac cagttcgtgg cggaagtcct cggtggggcc
     2821 gtgatgcgtc tgccggccat caccctccag cgggatgatc ttgtcgtgga tgaacgcgcg
     2881 tgtgcgctgc tgcaattcct gcagctcggg ggtaagggaa aaatccatca gaatgcgcgt
     2941 ccttgggcga tttcgtgggt gaattccagg atgccggtgc cgaggccggt caacggcgcg
     3001 taacgcggtt cttgtgttgc accggagcgg tagcgcaggc cgagttgcag gaagataact
     3061 gacaatttgt acatcgccag cacgcgatgg aacaggaagt tggacatgtc gctgccggat
     3121 atgcgggcat attccgccac ggcgttctgg cgcgagcaaa gacaggcctc gaccgcgggc
     3181 atctgctcca tatcgtgcat ggcgggggga tcgtccgcgt ggatccagta gctcagcagg
     3241 gtggcgaaat cgaacagcgg gtcgccgcgg gtgccctggt cccagtccac caccgcgcgc
     3301 ggagagaaat cgtccgggtc caggatgatg ttgttgagct tgaaatcatt gtgcagcagg
     3361 ctgggctgcc cgtccggcac gatgtgctgt tccagccata gtccgacatc gttgtgcaag
     3421 ctttcggttc cttcctgcat cgccgccagc ccgcgcttgc gccagccaga aacgcctcgc
     3481 gccagaaacc cttccggacg gcccaaatcg tccagcccga ccgccttggt atccacggcg
     3541 tggatggcgg cgatggtttg cagcagcatg cgggacaggc gcaccccgac atccggtcga
     3601 tgcgcgaggt cggggggcaa gtgctcacgg atcaccaggc cgggccggta ttcgatgatc
     3661 tggaagcgtt ggccgatgat cgaggggtcg tcgcacagat gcagcccgcg ggcgatgaac
     3721 ggcaacgcgt cgggcagtcg ggagaggatg cggaactcgc gtgccatgtc gaaggcgccg
     3781 gccggcagct cgcccatcgg cggacggcgc agcacggcgg gtttgccgtc cagatggatc
     3841 aggtagttca agttggccag accgcccgcg aactggcgtg gaggcggttc ggcgtccagg
     3901 tgacggccgt gggttgccag ataggtacga accttggacc agtccaaggg aacgctctcg
     3961 gcggcggacc gcaggccggt ttcggttggc acgcatcctc ctcctgttct tgatgtgatc
     4021 actcaataca acagcaggcc gtcgaggcgc taatcggcag cctcaccaaa tccgaccagc
     4081 atctgtcctt cctgcaccat ctctcccgtg gcgcaggaca ccgacgcgac gaccgtatcg
     4141 gttggcgcgg acagccggaa cacggtcttc atcgcctcca gcaccaccag cacctgcccg
     4201 cgcaccacgt ggtcaccgac cgctgtcatg acctgggtca ccagtccagg gatcggcgcc
     4261 accaggcggt caccggcgtc ctcctcctca tcggccgcgg ccagcgggtc cggcagtgtc
     4321 agccgccatg tcagcccgtt gtcgcggagc gtcactacgt gctggtcgag cgttgcgccg
     4381 actgtccgcc agacgccatt tagcgacacg cgcagccgtc cttggtccag gcgttccgcg
     4441 tggcccagaa tgtcgccgat ccgccatccg ctgccgtcgc gggtcaccga aaccgggaag
     4501 ctggtttccc cgtcggtgaa ttccagcact cgcgtcggtg ccgtgttcag ccaccacagg
     4561 tcggtggtgt cccatggatc gtcgcttgcc ggaggttcgg cgtgcagcac cgtcaaggcg
     4621 gcaattgcca ggacctcgac gggcggtgtt gtctgaggcg ccagcagcgt ggcgccttcc
     4681 cgagcgataa aaccggtgtc gatgccgccg gctgcgaaat ccggatgggt gacgatacga
     4741 cggagcagat cgaggttgct ggcgacgccg gcgaccgaac aatcggccag ggcttgcgcc
     4801 atccggcgta gtgcggcgtc tcgcgtcgaa ccgtaacaaa tcagctttgc gagcatcgca
     4861 tcgtaatgga tcgataccgt atcgccggtg gcgaaaccgg tgtcgacacg cacgccgtca
     4921 gtctcgatcg gggtctggaa cagtgccaga cggccgaccg agggtgcgaa atcacgcgcc
     4981 gggtcttcgg cgtagatacg tgcctcgatg gcatgaccgg tcagcgtgat cgctgattgc
     5041 gccactgaca ggggctcgcc cgcggccacc cgcaactgcc attccaccag gtcgaatccg
     5101 gtgatcattt cggtgacggg gtgctcgacc tgcagccgcg tattcatctc cagaaagaag
     5161 aagccgcctg catcagcgac gaattcgacg gttccggcgc cgacgtagcc gactgccttt
     5221 gccgctgcga cggccgccga tcccatctgt tcccgttggg ccgccgacag tcctggcgcg
     5281 ggcgcttctt ccagcacttt ctggtgccgg cgctgggcgg agcagtcacg ttcgaacaga
     5341 tgcacggcgt tgccatgagt gtcggcgaag acctgaacct cgatgtggcg cgggcgttgc
     5401 agataacgtt ccaccaacac gcggtcgtca ccgaacgcgg acgccgcctc ctgctgtgcg
     5461 gactccagcg cggcggcaaa ttcggttgcg gaggcaacga cccgcatgcc gcgcccgcca
     5521 ccgccggaca ctgccttgat caccaccgga aagccgatcc gcgccgcctg atcttccagg
     5581 aacgcggcgt cctgccgatc cccgtgatag cctggcagca gcgggacggc ggatttctcc
     5641 atcaacgcct ttgccgccga tttcgatccc atcgcccgca tcgctgaggc cggcgggccg
     5701 acgaatacga tgcccgcttc ggtgcaggcg tcggcgaagg ccggattctc ggacaggaag
     5761 ccatagcctg gatgaatcgc atccgcgccc gcggccaggg cggtttcgat gatccggggg
     5821 atgttcaggt aactttcgcg cgccggggcg ggaccaatcg gataggcgcg atccgtcgcc
     5881 tggacgtgca gtgcgcgggc atcggcctcc gagtagaccg caatggtttc gatacccatg
     5941 cgtcgcgcgg tgcgggcgac gcggcaggcg atttcgcctc ggttggcgat cagcaaggaa
     6001 cggaacatgc cggtcacatc cggaacacgc cgaagcgcgt gtcctgcaag gatttgttga
     6061 gggcggccga cagagcaagc cccaggaccc gccggctgtc agccggatcg atgatgccat
     6121 catcccagac ccgggcgctc gcgtaataag gatgcccctg ggtgtcatat tgcatacgga
     6181 tcggtgcctt gaacgcctct tcctgctcct tggtccaatc ggcggacccg ctgcgcaccg
     6241 ttgtcaggac gccggcggct tgctcgccac ccatgactga aatccgggcg ttgggccaca
     6301 tgaagaggaa gcgcggatca tacgctcggc cgcacatgcc atagtttccc gcaccatagc
     6361 tgccgccgat gatcatcgtg atcttgggca ctgcggtggt ggcgacagcg gtgaccagct
     6421 tggcgccatc cttggcgatg ccgccggatt cgtatttgcg tccgaccatg aagccggtga
     6481 tgttttggag gaacagcagg ggaatgttcc gctgactgca tagttcgata aaatgcgcgc
     6541 ctttcagcga cgattcggaa aacaggatgc cgttgttggc gacgatgccg atcgggtagc
     6601 cgaacagatg tgcaaacccg cagaccagag tggtgccata tagccgcttg aattcatcga
     6661 agtcgctgcc gtcgacgatg cgggcaatca cttcgcgcac atcgtagggg gtccgtagat
     6721 cggccggtac aaccccgtgc atttccgttg gatcgtatcg aggtggctcc ggcgtgcgcc
     6781 gctgcagaac cgccggcttt acccggttca gcccggccac gatgcgccgg cagatcgaca
     6841 gcgcgtgatg gtcgttgcgg gcgtaatgat cgacgactcc ggaagttcgg gcatgcacgt
     6901 cggcgccgcc caggtcctca gccgaaacga tctcgccggt cgccgcctgt accagcggcg
     6961 ggccggcgag gaagatcgtt ccttgtttgc ggacgatgat gctctcgtcg ctcatggcgg
     7021 gaacgtaggc gccgccggcg gtgcaggaac ccattacgac ggcgatctgc ggaatgccct
     7081 cggccgacat gttggcctgg ttgaagaaga tacgaccaaa atggttccgg tccgggaaga
     7141 tctcatcctg catcggcagg aacgcaccgc cggaatcgac cagatacaga cagggcagtc
     7201 cgttcgcgcg cgcgatttcc tgcgcgcgca gatgtttttt gaccgtcatt ggaaagtagg
     7261 tgccgccctt gacggtggca tcgttggcga cgatcacgca ttctcgcccc gagacccggc
     7321 cgatgccggt gacgatcccg gcagcgggca catcgccgcc gtaaagcccg aacgcggcga
     7381 gttgggagaa ttccaggaat ggcgagccgg ggtcgatcag agccgccacg cgatcccgcg
     7441 gcagcagttt tccgcgggcg atatggcggt cacgggcggt tgtgccgccg ccttgggcga
     7501 tgtccgccac acgggcgcga aggtccgtta ccaggcctcg catcgcctcg gcgttggcgg
     7561 tgaagtcagg ggaacgggga gagatgtcgg aacggatcgc ggccatctaa cgggatacct
     7621 cttcccggca cgaacgatgc agattcatca tgccgtctcc gcgaataatt cgcgcccgat
     7681 cagcatccgg cggatctcac tggttcctgc accgatttca taaagcttgg catcccgtaa
     7741 cagccgtccc gtcgggtagt cattgatata accgtttccg cccagcgcct ggatcgcctc
     7801 cag
//
LOCUS       DATAVD010001135         2908 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_112471, whole genome shotgun sequence.
ACCESSION   DATAVD010001135 DATAVD010000000
VERSION     DATAVD010001135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112471"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..1414)
                     /locus_tag="VHX39_21670"
                     /pseudo
     CDS             complement(126..1414)
                     /locus_tag="VHX39_21670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032492304.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISKra4 family transposase"
     gene            1867..2577
                     /locus_tag="VHX39_21675"
     CDS             1867..2577
                     /locus_tag="VHX39_21675"
                     /inference="COORDINATES: protein motif:HMM:NF024676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family protein"
                     /protein_id="HEX3993788.1"
                     /translation="MSRSVRLLRLLQAMRGRRQPVTAAQLAEALEVSERTIYRDVADL
                     MAQGAPIDGEAGVGYILRPGLFLPPLMLSEDEVEAVMLGLRYVDQRGDDVLQAAAAVA
                     STKISAILSAQAQTQITNPLSLPGPPRTFPPNAVPLDELRGAIRDRVRLDIRYGDKQE
                     RRTERIVWPIQLGFMDQARILCAWCELRQDFRTFRTDRIVAMTRMDSYPARRTDLVRR
                     LRSHFDSVANWKISPDGN"
     gene            2627..>2908
                     /locus_tag="VHX39_21680"
     CDS             2627..>2908
                     /locus_tag="VHX39_21680"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX3993789.1"
                     /translation="MPTDITNNLPKVIGANVAACNAHDIDAWMETFAEDAMLNDISRE
                     FIGAKAIRAFAEKEIFGDNVTMAVHRAWDRYGDVTVHARFDGTYDKKGLP"
BASE COUNT          574 a          908 c          835 g          591 t
ORIGIN      
        1 gtagcaggcc tgctgcccca gccggccaga atttgccacc cgttttttta agtgcgtccg
       61 gcgcgcttgc gtgccggacg ttttgttcag attgggatct tgagaccgtc tcaaacctgg
      121 gggggttatg ccacgcgacg aaaaggacga caggcgcggc cttcggcgcc ggagtggtcg
      181 tattcgaggg taccattcat caccgcgcat cgaaccttga gaatcaaatg cgcaccgcgc
      241 ggcgtccacc gcatctgctg ttgggcgttc atccggcgat gcagcagcca ttgtactgtg
      301 ctttcggtga ccgccgtgca gattggctcc tcgcgccgcc tggccgtcgc atagtcgatg
      361 atgatatcgg actgcccgca tacatatgtt tcgaggtcac ctagaagacg cgtcactttc
      421 agcgcgaccg acgttgccgg cgatgctgtt tcggtcgtgg cttccagagc tgccatggtt
      481 tctgcaatga gattgagacc gcgcctgacc tgtccatgcc atagccgcca tcggatccgc
      541 tcgatcgtct cggcaaggct ggcacctgcc ttgcgatcct ccgccgaggc gtcaggccag
      601 ctcatggctg cctgggtaac gtgctggatc cgcatcgaca agtggaacca gtccagcaca
      661 tggtgggtcg ggccgacgca cgccgattca ccaagagcgc gcggtccttc tgcaccgtcg
      721 ctcaagatca tgacgggcgt gtctggcgtc gctccaagcc catgtagcac gccgcgcaac
      781 tggtcccgtt gtcgatcagc ctcgccgggc atactgctga acacgacctg tttcccatcg
      841 tcattgctga cctgggcaag catcacctcg aacgagcgaa cctgataact gcgaaccgag
      901 cgcccacccg catggtccgc cggcgggtcg tctccaccgc cggaacgtcg ccgagtggca
      961 ggaattccga caacagcgtt ctggcccgag cgtagggcag catagatccc atcttcgcga
     1021 tgatacgttc gtactccggc gtgcaacggt cgggcatgat ctcggcgaca ggattgagcg
     1081 tatgccggcg ggtcaccgca cactggcggg gcaaaaagcg cggcgctcga acttccactg
     1141 ttccgaacaa agacaacagc cgccgcccac ggacatcctt gagtggccgt cgcgacccgc
     1201 agtaagagca gccccgccgc tggcggcaac attcgtcggc ctgcgcccga acaaggtggt
     1261 cctgtaatcc cgccagtgtc cgttttccgt ccgcgagcgt cagaccgacc gttccagccg
     1321 agcattcgat cgtgttggtg ccgcccgcgc tggtctcgtg caaccggaca atgccatcgc
     1381 ttcccgtcaa ctccaccatg acccgccact tcatcccgct cccccggtcg gccattatca
     1441 gccttaccct taccaccccc caggtttgag acggtctccg cggcaatcct tcccagctgc
     1501 acatggcgtt atcatctgcc cgcatcggtt cggccgtgcc gcgaaaggcc agcatctcgg
     1561 gtgtgcgatg ctcgaccggc accgcaatcc agattagcgc cgtcataggg tcacctggcg
     1621 gagccttctg catgatgatc gtcagacctg gacggcgagg cggggccaat gtggcgagag
     1681 tctatgcatc agaaatctgc accgaaaaag cccatccaga tcagcgctct gcgtttgata
     1741 caaatgtcct gatttatgca tattgctgct aggccttggt gcgaccgctg aagcctatcc
     1801 gaccacgacc ctgacatata ttgtcaggag ttaagtgtat gaggacatca aaggtccatc
     1861 tgatccatgt cacgttccgt ccgtctcctc cgtctgcttc aagctatgcg cggccgccgc
     1921 cagccggtca ccgcagcgca gctggcagaa gcgttggagg tgtcggaacg aactatctat
     1981 cgagatgtcg ccgatctgat ggcgcaaggc gcaccgatcg acggcgaggc cggcgttggt
     2041 tacattctgc ggcccggtct cttcctgccg ccacttatgt tgtcggaaga cgaggtcgag
     2101 gcggtcatgt taggtctgcg ctatgtcgat cagcgtggcg acgacgtgtt gcaagcggct
     2161 gcggctgtcg cttcgacaaa aatcagcgcg atattgtcgg ctcaagctca gacgcaaata
     2221 acgaacccac tatcgttacc cggaccgccc cggacctttc caccaaacgc tgtgccgctc
     2281 gatgagctgc gcggagcaat ccgcgatcgg gtccggctcg atatccgcta tggggacaaa
     2341 caggagcgac gcaccgaacg catcgtctgg ccaattcaac tcggcttcat ggatcaagcg
     2401 cgaatattat gcgcgtggtg cgagttgcga caggatttcc gcactttccg caccgatcgt
     2461 atcgtcgcga tgacacggat ggacagctat ccggcccggc gcacagacct cgtgcgccgt
     2521 ctacgctctc acttcgacag tgtggcgaat tggaaaatct ctcctgacgg aaactgacag
     2581 gagggtgcgc ttacaacctc ttcaccccaa tgcgaaggag atcgccatgc cgaccgatat
     2641 caccaacaat ctgcccaagg tcatcggtgc aaatgtagcc gcctgcaacg cgcacgacat
     2701 cgatgcctgg atggagacgt tcgcagaaga tgcaatgctc aacgacatta gtcgggagtt
     2761 tatcggtgcc aaggcaattc gtgcctttgc cgagaaggag atatttggag acaatgtgac
     2821 gatggcagtc catcgcgcct gggatcgata tggtgacgtt acggtccatg cccggtttga
     2881 tggaacttat gacaagaagg ggttgccc
//
LOCUS       DATAVD010001136         1979 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3271088, whole genome shotgun sequence.
ACCESSION   DATAVD010001136 DATAVD010000000
VERSION     DATAVD010001136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1979
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3271088"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            105..416
                     /locus_tag="VHX39_21685"
     CDS             105..416
                     /locus_tag="VHX39_21685"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3993790.1"
                     /translation="MTAKDFTVAEHDRRSETFADEWINRDIQRDGERRPRPKHMLSFT
                     QLANDASIAVLDVGGGFGVVSEEVLQTFPRSRVTLQDYSQPMLDREQAPEAIVAARTK
                     R"
     gene            534..1373
                     /gene="dapD"
                     /locus_tag="VHX39_21690"
     CDS             534..1373
                     /gene="dapD"
                     /locus_tag="VHX39_21690"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002729010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008666 -
                     2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HEX3993791.1"
                     /translation="MPAHSLQQPIEDLWEQRDQLSSATRGEARDAVEAALEALDNGTV
                     RVAEKTGGDWHVNQWLKKAVLMSFRLTDSSPMEGPGGAPVWDKVPMKFTGWGENRFKE
                     AGFRAVPGAVVRRSAFIAPGAVLMPSFVNVGAYVGRNTMVDTWATVGSCAQIGSNCHL
                     SGGVGIGGVLEPLQANPVIIEDDCFIGARSEVAEGVVVEKGAVLSMGVFIGASTKVID
                     RASGEIHIGRVPSYSVVVPGSLPGRPLPDGSPGPSLYCAVIVKIVDEQTRAKTSINEL
                     LRD"
     gene            1370..>1979
                     /gene="dapE"
                     /locus_tag="VHX39_21695"
     CDS             1370..>1979
                     /gene="dapE"
                     /locus_tag="VHX39_21695"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HEX3993792.1"
                     /translation="MSDLTDPPLRSGLTDPLPLAQELIRCNSVTPADGGAQDVLAEAL
                     NRLGFTVHRLRYGNIENLFARRGTDGPHICFAGHTDVVPTGAVNWRNNPFGGEIRDGV
                     LYGRGACDMKGAIAAFVAATAQHLETASGKGSISFLITGDEEGPAVDGTVKVLEWMRS
                     HNQIPDFCLVGEPTCPVKLGDMVKIGRRGSVNFKIEVHGTQGH"
BASE COUNT          370 a          623 c          629 g          357 t
ORIGIN      
        1 acctgaatgg tgctaaacgt tgttaaattg gctgcgaccg cacaaggatc aacccacgcg
       61 aggttgccag gtaggttggt cgtcgaacgc ctcgggggtc ggaaatgacc gcaaaggact
      121 tcaccgtcgc cgaacacgac cggcgatccg agacctttgc cgacgaatgg atcaatcgcg
      181 acattcaacg cgacggggag cggcgtccac gcccgaagca catgctttcg ttcacccagt
      241 tggcgaacga tgccagcatc gcggtgcttg atgtcggcgg cggcttcggt gtcgtgtcgg
      301 aggaagtctt gcagacattt ccgaggtctc gcgtaacgtt gcaggattac tcgcagccga
      361 tgctcgaccg tgagcaagct ccggaggcca tcgtcgccgc gcggacgaag cggtaagcgg
      421 cgtggcatcc agaaatttgg ccatggcggg ccggcggttc gcccgacgcg ttgacatccc
      481 cggtcccccc gctcaatttc cgccgccgaa ccaaccaggg aaccgccagg cacatgcccg
      541 cgcacagcct tcagcaaccc atcgaggatt tgtgggaaca acgtgaccag ctttcctcgg
      601 ccacacgcgg cgaagcccgc gatgcggtcg aggcagcact cgaagcgctc gataacggca
      661 ccgtccgcgt cgccgagaaa accggcgggg actggcacgt caatcagtgg ctcaaaaaag
      721 ccgtactgat gtcgttccgc ctgaccgact cctcgccgat ggaaggccca ggtggagcgc
      781 ccgtctggga taaagttcca atgaaattca ccggctgggg cgagaaccgc ttcaaggaag
      841 ccggcttccg ggcggtcccc ggcgcggtcg tccgccgctc ggccttcatt gcccccggcg
      901 cggtgctgat gcccagtttt gtcaatgtcg gagcgtatgt cggccgcaac accatggtcg
      961 acacctgggc caccgtaggc agctgcgccc agatcgggtc caactgtcat ctctccggcg
     1021 gcgtcggcat tggcggcgtg ctggaaccat tgcaggccaa cccggtcatc atcgaggacg
     1081 actgcttcat cggcgcccgc tctgaggtgg ctgagggcgt ggttgtcgaa aaaggcgccg
     1141 tgctgtcgat gggcgtgttc atcggcgcct ccaccaaggt gatcgaccgc gcatccggag
     1201 aaatccatat cggtcgcgtg ccgtcttatt cggtggtggt gcccggctcg ctgccgggca
     1261 ggccgctgcc ggacggctcg cccggcccgt cgctgtattg tgccgtcatc gtcaagatcg
     1321 tcgacgagca gacccgtgcc aaaacctcca tcaacgaatt gttgcgcgat tgagcgacct
     1381 gaccgatccc ccgctgcgga gcggcctgac agacccgctg ccgctggccc aggagctgat
     1441 ccgctgcaac tcggtgacgc ccgcggatgg cggcgcgcag gacgtcctgg cggaggcgct
     1501 gaaccgtctt ggtttcacgg tgcaccggct gcgttatggc aacatcgaga atctgttcgc
     1561 tcgccgaggc accgacggcc cgcatatctg tttcgccggg cataccgatg tcgttcctac
     1621 tggcgcagtg aactggcgga ataatccgtt cggcggcgaa ataagggacg gtgtcctgta
     1681 tggtcgcggc gcctgcgaca tgaaaggtgc gatcgccgct tttgtcgccg ccacggcgca
     1741 gcacctggaa accgcgtccg gcaaaggctc gatcagtttc ctgatcaccg gcgacgagga
     1801 agggcctgcc gtcgacggca ccgtgaaggt gctggaatgg atgcggtcac acaaccaaat
     1861 ccctgacttc tgccttgtgg gtgaaccgac ctgccccgtc aaactgggcg acatggtcaa
     1921 aatcggccgt cgtggcagtg tgaatttcaa gattgaagtg catggcactc agggccacg
//
LOCUS       DATAVD010001137         2627 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3647480, whole genome shotgun sequence.
ACCESSION   DATAVD010001137 DATAVD010000000
VERSION     DATAVD010001137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2627
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3647480"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1422)
                     /locus_tag="VHX39_21700"
     CDS             complement(<1..1422)
                     /locus_tag="VHX39_21700"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX3993793.1"
                     /translation="MNARLEQLFEPYRRNDAPGCIVGVTHRGELVYRAAFGMANVEHG
                     VANTPATRMPVASISKHFTCAAVLRLAAEHKLDLEDPIGRWVPELTAQQRAPTLRQLM
                     THTGGLRCYIDHALFDGFTLMPTGRPAELQRRLTEVNFPPGQGMSYSNAGYMLLTWAI
                     ERAAGVPLEDVLRSVLTDAGLESTSLPRWDMPVKAGVATPYQRASEQSGRGWQHSACL
                     AEELFGDAGIISTVNDLLRWAAYLRTSSGPVSLDALTSTTLLANGLQSRYGLGLITKP
                     WRGLRLVHHAGTFPGVTAQFLTVPDEELDVVVLFNRAAPAVDLSQKIVAIMLEGRLQE
                     PTPAPAAASYPSLLGEYVAPDTGMLFGLADKQGQLALSQFGGSPVPLETCPASADHWP
                     FSLDVGSGDMLFRPCPQATIGDIEYLDRSGWHIARRIDGEPSSAAEVVRAAPDDYRSD
                     CAAATLRFLARDTGLEVVITGEYG"
     gene            complement(1434..2270)
                     /locus_tag="VHX39_21705"
     CDS             complement(1434..2270)
                     /locus_tag="VHX39_21705"
                     /EC_number="4.1.2.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxycinnamoyl CoA hydratase/lyase"
                     /protein_id="HEX3993794.1"
                     /translation="MTARAEADTVSVTVRNGIAWVKFNRPEKRNCMSPKLNRQMLRVI
                     EELEFRDEVGVLVLTGEGDAWSAGMDLQEYFRETEAQGLPGVRQSQREAYTWWERLRN
                     YQKVTIAMINGWCFGGAYGPLFACDLAFCADDAQFGLSEINWGILPGGGATKVAVELM
                     PMRKAMYHALLGENLTGKDAEAAGLVNESLPADKLEARVLEVANKLLKKNPFTVKATK
                     DAVRRTREMTYQNAEEYLIRAQEGLNWHDKSDGRHVAMKQFLDDKTFKPGLGTYDTTK
                     AR"
     gene            2331..>2627
                     /locus_tag="VHX39_21710"
     CDS             2331..>2627
                     /locus_tag="VHX39_21710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993795.1"
                     /translation="MGAMKTRSRSALQEPLLALTGYVLRRASIATLAEFSERLAPLDL
                     RPVDAALLILLDAAPQVTHSEVAATLGLRRPNLVPVVAALQKRGLLDRKRLDFRS"
BASE COUNT          471 a          849 c          804 g          503 t
ORIGIN      
        1 tccatattcg ccggtgatga cgacctcgag tccggtgtcc cgggcaagga agcgcagcgt
       61 ggcggcggcg caatcactgc gatagtcatc gggcgcggct cgcaccactt ccgcggcgct
      121 cgacggctca ccgtcgatgc gccgggcaat gtgccacccc gagcgatcca ggtattcgat
      181 gtcaccgatc gtagcttgcg ggcacggacg gaacaacata tcaccgctgc ccacatcgag
      241 cgaaaaaggc cagtgatcag cggacgccgg gcacgtttcc aacgggacag gcgagccgcc
      301 gaactgactc agagccaatt gcccctgctt gtcggccagg ccgaagagca tgcccgtatc
      361 cggcgcgacg tattcgccca acaatgacgg gtatgaagcc gcggcaggcg caggcgtggg
      421 ttcctggagc cggccttcca acatgatcgc cacgatcttc tggctgagat cgacggcggg
      481 ggcagcccga ttgaatagca ccacgacgtc taattcttcg tccgggacgg tcaagaactg
      541 cgcggtgaca cccggaaagg taccggcgtg atgtaccagc cgaaggccgc gccaaggttt
      601 ggtgatcagg cccaagccgt aacgcgactg cagaccgttc gcgagcaggg tagtgctggt
      661 gagagcatcg agcgacaccg ggccggacga cgtgcgcaag tacgctgccc agcgtagcaa
      721 gtcgttcacg gtcgaaatga tcccggcgtc gccgaacaat tcctccgcga gacaagcact
      781 gtgctgccat ccacggccgg attgttcgga agcacgttga tacggagtcg cgactcctgc
      841 tttgacgggc atatcccagc gtggcagcga agtcgactcc aacccggcgt cggtgagaac
      901 gctgcgcagc acgtcttcca gcggcacacc cgccgctcgc tcaattgccc aggtgagcaa
      961 catatagccg gcgttgctgt agctcattcc ctgaccaggc ggaaagttca cctctgtcag
     1021 gcggcgctgc agttccgccg gcctgccggt cggcatcagc gtgaatccat cgaatagggc
     1081 atgatcgatg tagcagcgca gtccgccggt gtgggtcatc aactggcgta gcgtgggcgc
     1141 gcgctgctgc gccgtcaact ccggaaccca tcgcccgatg ggatcctcca ggtccaactt
     1201 gtgctcggcc gccaggcgca acaccgcggc gcaggtgaag tgcttcgaaa tcgacgccac
     1261 cggcatgcgc gttgccggcg tgttggctac tccatgctcg acattggcca tgccgaaggc
     1321 cgctcggtag accaactcgc cccggtgtgt cacaccgacg atgcagcccg gtgcatcgtt
     1381 gcggcggtag ggttcgaaga gttgctccag ccgagcgttc acggttcttg gtgtcagcgg
     1441 gccttcgtcg tgtcgtaggt accgaggccg ggcttgaagg tcttgtcgtc gaggaattgt
     1501 ttcatggcca cgtgccggcc atcggactta tcgtgccagt tcaggccttc ctgagcacgg
     1561 atcaagtatt cttcggcgtt ctggtaagtc atctcgcgcg tgcgccgcac ggcatccttg
     1621 gttgccttga cggtaaacgg attctttttc aacagcttgt tggctacttc gagcactcgc
     1681 gcttcgagct tgtcagccgg cagggactcg ttgaccaatc ctgcggcctc ggcgtccttg
     1741 cccgtgaggt tttcgcccag gagcgcgtga tacatggcct tgcgcatcgg catgagctcg
     1801 acggcaacct tggtagcgcc gccgccgggg agaatgcccc agttgatttc cgacaggccg
     1861 aactgcgcat cgtccgcgca aaacgcgaga tcgcaggcga acagcgggcc gtaggcgccg
     1921 ccaaaacacc agccgttgat catggcgatg gtcactttct ggtagttacg cagccgttcc
     1981 caccacgtat aggcctcgcg ctgtgattgg cgcacgcccg gcagaccctg cgcttcggtc
     2041 tcgcgaaagt attcctgcag gtccatgccg gccgaccagg catcgccctc gccggtgagc
     2101 accaacacgc ctacctcgtc gcggaactcc aactcctcta tcacccgcag catctgccga
     2161 ttcagcttcg ggctcatgca gttgcgcttt tcggggcgat tgaatttcac ccacgcaatg
     2221 ccgtttcgta cggttacgct gactgtatcg gcttcggctc gggcggtcat ggtcatctcc
     2281 agaacgggcg acggtggcaa cagttctatc atataactga ttcggttact atgggcgcca
     2341 tgaaaaccag gtcccggtcc gctctgcagg agccccttct cgctctcacc ggctatgtgc
     2401 tgcgccgcgc atcgatcgcc accctggccg agttcagtga gcggttggcc cccctggacc
     2461 tgcgcccggt cgacgcggcg ctgctgatcc tgctcgacgc cgcgccccag gtgacccata
     2521 gcgaagtcgc cgcaacgttg ggactacggc ggccgaacct cgtgcctgtc gtggcggcgc
     2581 tgcaaaagcg cggtctcctc gaccgcaagc gtctcgattt ccgttcc
//
LOCUS       DATAVD010001138         3188 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1784909, whole genome shotgun sequence.
ACCESSION   DATAVD010001138 DATAVD010000000
VERSION     DATAVD010001138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3188
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1784909"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2099
                     /locus_tag="VHX39_21715"
     CDS             <1..2099
                     /locus_tag="VHX39_21715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEX3993796.1"
                     /translation="AGTGKTRVLTTRFAHILLTKRAFPNQVLAVTFTNKAAREMRERV
                     SALLGEPAEGLWLGTFHALCARMLRRHAEHVGLASNFTILDTDDQLRLLKQVMEAERI
                     DTKRWTPAGLMGVIQRWKDRGLTPARITPNEDSDFANGLAQSLYAAYQERLRTLNTAD
                     FGDLILHMTEILRTQPDVLADYHRRFRYILVDEYQDTNLVQYLWLRLLAQGHQNICCV
                     GDDDQSIYSWRGAEVENILRFEKDFEGAHIVRLESNYRSTASILAAASGLIAHNEGRL
                     GKTLRPGRADAQNGEKVSVIELWDSDEEARMVAGKIEDLRRDGDSLAEMAVLVRAGFQ
                     TRAFEERLITVGIPYRVVGGLRFYERAEIRDAIAYMRATVQPADDLAFERIVNVPRRG
                     VGESALRTMHEASRTWQIPLSAAAARLVETGGLKGKVKEAIGTLLRHMGHWRDMLAVD
                     GHVVTVATMLDESGYTEMWKQDKSAEAPGRLENLKELVRALADFETLAGFLDHVALVT
                     ENEDRSDTDKVSLMTLHGAKGLEFDSVFLPGWEEGVFPNQRSMDESGNKGLEEERRLA
                     YVGLTRARKRAIVSHAANRRIYANWQVSIPSRFLEELPDAHVEQTGGSRAARVNAATS
                     FSGQFPLIARPPRVIDVWEQPGRPARADKIPVGARVFHQKFGYGTVNAVDDDKLDVHF
                     ETSGDKRVLDRFVERA"
     gene            2099..2995
                     /locus_tag="VHX39_21720"
     CDS             2099..2995
                     /locus_tag="VHX39_21720"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010666628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEX3993797.1"
                     /translation="MANHPIPLETVAVSVTEDALEAYEAALANACETVGFFRDHDTGI
                     WRVEGVKQIGVNEAELASSLAVAAVLTNETPVLERSATQADGWLARTYAAFPEQLIGE
                     RFAVRGTHLTGPMTPNRITLTLDAGLAFGTGEHGSTRGCMVALEAVARRRPVRILDIG
                     TGSGILAMAAARLLNRPVLATDIEPWAVRVTRENAELNGVAHLVTARLADGWRDPIVR
                     GGGAYDLVFANILARPLCLMARDLALNLAPGGTAILAGLLANQARWVLAAHRSQGLRL
                     ERMLPQGPWTTIVVRKAFTAAF"
BASE COUNT          608 a         1033 c         1008 g          539 t
ORIGIN      
        1 gtgccggcac cgggaaaacc cgcgtactga ccacccgctt cgcccacatt ctgctgacga
       61 agcgggcatt ccccaaccag gtcctggccg tcaccttcac caacaaggct gcccgtgaga
      121 tgcgcgaacg cgtctccgcc ctcctcggcg aacccgcgga aggcctgtgg ctcggtacat
      181 tccacgcctt gtgcgcccgc atgctgcgcc gccatgccga acatgtcggg ctggcatcca
      241 acttcaccat cctggacacc gacgaccagc ttcgcctgct gaagcaggtg atggaggccg
      301 aacggatcga caccaaacgc tggactccgg cggggttgat gggcgtcatc caacgttgga
      361 aagaccgcgg cctgaccccg gcacggatca cgcccaacga agattccgac ttcgccaacg
      421 gcctcgccca atcgctgtat gccgcctacc aggaacgcct gcgcaccctg aacaccgcgg
      481 atttcggcga cctgatcctg cacatgaccg agatcctgcg gacccagccg gacgtgctgg
      541 ccgactacca tcgtcgtttc cgctacatcc tggtggatga ataccaggac acgaacctgg
      601 tacagtacct atggttgcgg ctgctcgcgc agggccatca gaacatctgc tgcgtcggcg
      661 acgacgacca gtcgatctac tcctggcgcg gcgccgaggt ggaaaacatc ctgcgcttcg
      721 aaaaagattt cgaaggcgct catattgttc gtctggaatc caactatcgc tccaccgcct
      781 cgatcctcgc tgccgcctcc ggtttgatcg cccacaacga aggccgcctc ggcaagaccc
      841 tgcgccccgg ccgcgcggat gctcaaaacg gggaaaaagt atccgtcatt gagctttggg
      901 attccgatga ggaagcccgg atggtcgccg gcaagatcga ggacctgcgc cgtgacgggg
      961 attccctggc cgagatggcc gtcctggtcc gcgccggttt ccaaacccgc gccttcgagg
     1021 aacggctgat cacggtcggc atcccctatc gcgtggtcgg tggcctgcgc ttctacgaac
     1081 gcgccgaaat ccgtgacgcc atcgcctata tgcgcgcgac agtgcagccg gccgacgacc
     1141 tggcgttcga gcggatcgtc aacgtgccac gccgcggcgt cggcgaatcg gcactgcgaa
     1201 ccatgcacga agcctctcgc acgtggcaga ttccgctatc cgctgccgcc gcgcgtctgg
     1261 tggaaaccgg cggcctgaaa ggcaaggtga aggaagcgat cggcacgctt ctccgccaca
     1321 tgggccattg gcgcgacatg ctggcggtcg acgggcatgt cgtcaccgtc gccacgatgc
     1381 tggacgagag cggctacacc gaaatgtgga agcaggacaa atccgccgag gcccccggcc
     1441 gactggaaaa cctgaaggaa ttggtccgcg cgctggccga tttcgagacg ctggccggat
     1501 tcctcgatca cgtcgcgctg gtgacggaga acgaggaccg ctccgatacc gacaaggtca
     1561 gcctgatgac gctgcatggc gcgaaggggc tggaattcga tagtgtcttc ctgccggggt
     1621 gggaagaagg cgtcttcccc aaccagcggt cgatggatga aagcggcaac aagggcctgg
     1681 aagaagaacg ccgcctcgcc tatgtcggcc tgacgcgagc ccgcaagcgt gctatcgtaa
     1741 gtcacgccgc caaccgccgc atctatgcca actggcaggt cagcattccc agtcggttcc
     1801 tggaagagct gccggacgcg catgtggagc agaccggcgg gtcacgagcc gctcgggtca
     1861 acgcggccac atcgttctca ggtcagttcc cgctgatcgc tcgcccaccc cgcgtgatcg
     1921 atgtctggga acaacccggc cggcccgctc gggctgataa aatcccggtc ggcgcgcggg
     1981 tgttccacca gaaattcggc tacggcactg tcaatgcggt cgacgacgac aagctggacg
     2041 tgcatttcga aacatccggc gataagcgcg tgctcgatcg cttcgtggag cgtgcctgat
     2101 ggccaatcat ccgattccgc tggaaaccgt cgccgtcagc gtcaccgagg acgcgctgga
     2161 ggcctacgaa gccgcactgg ccaacgcgtg cgagacggtc ggtttcttcc gcgaccacga
     2221 caccggcatt tggcgggttg agggcgtcaa gcagattggc gtcaatgagg ctgaattggc
     2281 atcgtcacta gcggtggcag cggtgctgac caatgaaacg ccggtgctgg aacgctcagc
     2341 aacacaggcg gatggctggc ttgctcggac ctacgccgcg ttccccgaac agttgatcgg
     2401 tgagcgattc gcggtccgcg gcacgcatct gaccgggccg atgacgccga accggatcac
     2461 attgacgctg gacgccggtc tggcattcgg aaccggcgaa catgggtcca cccgagggtg
     2521 catggtggcg ctggaagccg tcgcccgccg ccggcccgtg cgtattctag atataggtac
     2581 cggctcgggc attctggcga tggcggcagc gcgattgctt aaccggcccg tgctggccac
     2641 agacatcgag ccctgggccg tgcgggtaac gagggaaaac gcggaactca atggcgtggc
     2701 tcacctggtg acggcacggt tggcggatgg ctggcgcgat ccgatcgtgc gcggcggtgg
     2761 ggcctatgat ctggtgttcg ccaatatcct cgcccgcccg ctctgtctga tggcccggga
     2821 tctggcgttg aacctcgccc cagggggcac cgcgatcctg gcgggactgc tcgccaatca
     2881 ggcacgttgg gtactggcag cgcatcggtc gcaagggttg cggctggagc gaatgttgcc
     2941 acagggacct tggacgacga tcgtggtacg gaaggcgttt accgcggcct tttgaaccgg
     3001 ggcataccat gcctcacccg gaccatcacg cggtctggtc agcatgaatg agcatcctgt
     3061 atcctcggcc ggactcagtc actcagggag gggcggacca tggccagcat cagcatcacg
     3121 gcaaccgacg gcagcggaac attcgccgcc tacgtcgcgg aaccaaagac gaaacccgcc
     3181 ggcgtcgt
//
LOCUS       DATAVD010001139         5478 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1411074, whole genome shotgun sequence.
ACCESSION   DATAVD010001139 DATAVD010000000
VERSION     DATAVD010001139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5478
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1411074"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..232
                     /locus_tag="VHX39_21725"
     CDS             <1..232
                     /locus_tag="VHX39_21725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993798.1"
                     /translation="TARTTGVPVSLGENQYKLELGGGRLQASIAMVVRGITLNTKTID
                     PAEWFTRLAQETKAATEHAKALSQSLDAFMGS"
     gene            234..1145
                     /locus_tag="VHX39_21730"
     CDS             234..1145
                     /locus_tag="VHX39_21730"
                     /inference="COORDINATES: protein motif:HMM:NF014019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HEX3993799.1"
                     /translation="MSSSDQADDAARQAAHDRRVADIANALRTGTVPNATRTRLEAAR
                     AGKLPWLATLTPAELMVARSHGLKPIAAVSATCWMHYGWSWTEGHAQGWEAALTRLRA
                     EAKAAGANAVLDVKMRTVPLQVENSMDFTLVGTAVYVDGLPPSTDPIVATVPALEFVK
                     LLEADVVATGIAIGAQYDWLNDWRGNASQTWMGNIESTWLSQFWETIRHRAHAQLRQS
                     AAGQGNGVLAHVNFGQLFEFEGGQNQPKRFLGRQIVIATTVDTRRGVPFPHDIKMAID
                     LHAGATPLTGHEQHHQSYASNEQTGAI"
     gene            1149..1964
                     /locus_tag="VHX39_21735"
     CDS             1149..1964
                     /locus_tag="VHX39_21735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HEX3993800.1"
                     /translation="MPNDLPVHARERLKGLRTSAHSTGVFTSDFSVNEFLLVRKSGFE
                     PIGLCMGTCVYHVGVQWGAWSRNQEMEVLSKAMYHARELAMARMRAEASAMGADGIVG
                     VKLTIKRLEWDEHLLEFIAIGTGVVHGEGHQGFRAHDGGPFTSDLSGQDFWSLLHSGY
                     RPVQMVMGSCVYHVAHRGVLAGMASMGRNVELENFTSAMYEAREIAVERMQFEASAAQ
                     AEGVVGVDIHEGSHVWKPHVIEFFAIGTAVVPLDQEIAPEKIGDPIMVLSVND"
     gene            2355..2852
                     /locus_tag="VHX39_21740"
     CDS             2355..2852
                     /locus_tag="VHX39_21740"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HEX3993801.1"
                     /translation="MPNEYPAFPDRPEFDVRGGMVTAFEVGGDIYDFYFIDDRRPGFV
                     VADASGKGLPAAMFITNMRSMLRPASHRVADPGACLTLVNQLLCFDNPAMLFATAFYG
                     VLDTETGEVAFANAGHNPPLHVEQGGVATPVKHLRAPMLGMFEEVVYRTGTLTLAPGD
                     TLCRT"
     gene            complement(2838..3122)
                     /locus_tag="VHX39_21745"
     CDS             complement(2838..3122)
                     /locus_tag="VHX39_21745"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3993802.1"
                     /translation="MWPALEQMRALKPDLVLLDIEMPKLDGIAVLKRARLTSSAKVII
                     LSSLAQLGSPQALEARRIGAAEVIAKPSGTISLDLKAKRGSDILRALRSA"
     gene            3442..4746
                     /gene="oxlT"
                     /locus_tag="VHX39_21750"
     CDS             3442..4746
                     /gene="oxlT"
                     /locus_tag="VHX39_21750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxalate/formate MFS antiporter"
                     /protein_id="HEX3993803.1"
                     /translation="MSATPMAPLPPTEMPSGRWAQLWLGVLCMMLIANLQYAWTLFVG
                     PIRAAHGWSLADIQWAFTIFIATETWITPFAGYAVDYMGPRRGPRLMILLGGIAVGLG
                     WVMNAYADSLMLLYAGAAISGLGAGGIYATCVGNAVKWFPDRRGLAVGLTAAGFGAGA
                     ALTVIPIRMLIEAQGYGAAFLWFGAGQGIILIIVSGILRAPDQILAAPAAVVQRLNQS
                     RRSFTSGEMLRSPIFWLMYVMFVLNAATGLMATAQLAPIAKDFGIANSPILFGATVLS
                     VALVVDNILNGLARPFFGWVSDFLGRELTMGIAFFLGACSYGLLTVAGHGAWTFVICA
                     GLIFFTWGEIFSLFPSLCTDTFGPKFAASNAALLYTAKGTAALLVPFANVLQSATGGW
                     GAVFTIAAVSNVVVALLAVAALRPLRRRIMTVPQPGLSAAMR"
     gene            complement(5134..>5478)
                     /locus_tag="VHX39_21755"
     CDS             complement(5134..>5478)
                     /locus_tag="VHX39_21755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX3993804.1"
                     /translation="GASAGGQILGRKTVELMTTNHLRGDMADMGQPRFSESSYYGIGF
                     GLGFSIMLDPAKAQILGTPGEYAWGGAASTAFWVDPAEEMIVIMMTQLLPSSTYPIRR
                     ELRVLSYQAVID"
BASE COUNT         1033 a         1643 c         1741 g         1061 t
ORIGIN      
        1 gactgccagg acgacgggcg ttccggtcag ccttggggaa aatcagtaca agctggaact
       61 cggcgggggc cggttgcagg ccagtatcgc catggtagtg cgcgggatca cgctaaacac
      121 caagaccatc gatccggcgg aatggttcac gcggttggcg caggaaacca aggcagcgac
      181 cgagcatgcc aaggcgctca gccaatccct cgacgctttc atgggcagtt gaaatgagca
      241 gttctgatca ggcggacgat gccgctcgcc aggcggcgca cgaccggcgt gtcgctgata
      301 ttgcgaacgc gctgcggacc ggcaccgtgc ccaatgcaac gcgcacccgg ctggaggcgg
      361 cgcgggccgg caaactgccg tggctggcaa ctctgacccc ggcggaactg atggtggccc
      421 gctcgcacgg actgaagccg atcgctgcgg tctcggccac ttgctggatg cattacggct
      481 ggtcctggac cgagggccat gctcagggat gggaggccgc cctgacgcgg ctgcgggccg
      541 aggccaaggc agcgggcgcc aacgctgtgc tggacgtgaa gatgcgcacg gtgccgctgc
      601 aggtcgaaaa cagcatggat ttcactttgg tcggcacggc ggtttacgtc gacggcctgc
      661 cacccagtac ggacccgatc gtggcgaccg tccccgctct ggaattcgtc aagctgctgg
      721 aggccgatgt ggtggccacc ggtatcgcca tcggtgccca atacgattgg ctgaacgatt
      781 ggcgcggcaa tgccagccag acctggatgg gcaatatcga gtccacctgg ctcagccagt
      841 tctgggaaac gatccgccac cgcgcccatg cccagttgcg ccagagcgcg gcgggacagg
      901 ggaatggggt gctggcgcat gtcaatttcg gccagttgtt cgagtttgaa ggcggccaga
      961 accaaccgaa acggtttctc ggccggcaga tcgtgattgc caccaccgtc gatacccggc
     1021 gcggggtgcc gttcccgcac gacatcaaga tggcgatcga tctgcacgcc ggcgccacgc
     1081 ccctgaccgg ccacgagcaa caccaccagt cctatgcctc caacgaacaa acaggagcga
     1141 tctgagcgat gcccaacgac ttaccggtcc atgcccgcga gcgcctgaaa ggactgcgca
     1201 cgtcggcgca ttccacgggg gtgttcactt cggatttttc ggtgaatgag ttcctgctgg
     1261 tgcgcaagtc ggggttcgaa ccgatcggcc tgtgcatggg cacctgcgtt tatcacgtgg
     1321 gcgtgcagtg gggcgcctgg agccggaacc aggaaatgga ggtgctgtcg aaggcgatgt
     1381 atcacgcccg tgagctggcc atggcgcgca tgcgggccga ggcgtctgcg atgggtgccg
     1441 acggcatcgt tggcgtgaag ctcaccatca agcggttgga gtgggacgag catttgctgg
     1501 aattcattgc catcggcacc ggggtggtgc acggcgaggg tcaccaaggt ttccgcgcgc
     1561 atgatggcgg accgtttacc tccgatctgt ccgggcagga tttctggtcg ctgctgcatt
     1621 cgggctatcg gccggtgcag atggtgatgg gcagttgcgt ctatcacgtg gcgcatcgcg
     1681 gcgtgctggc cggcatggcg agcatgggac gcaatgtgga actggagaat tttacgtccg
     1741 caatgtacga ggcacgcgag atcgcagtgg aacgcatgca gttcgaagcc agtgcggcac
     1801 aggccgaggg cgtcgtaggc gtcgatatcc acgagggcag ccatgtctgg aaaccgcatg
     1861 tgatcgagtt ttttgcgatc ggcacggcgg tggttccgct ggaccaggag atcgcaccag
     1921 agaagatcgg tgatccgatc atggtgttga gtgtgaacga ctgagatgtc gccaccgggt
     1981 ggtgagcccg gtggcactcg aaccccccat tccgggcatg cccgccacgc ctgatatctc
     2041 gaaaccggac gttcccgccc gcatcgcgta tctatcgggc gattgacacg aaaaattcat
     2101 acgccagcga acagacagac ggtcaccagg accgcaagtc acaccactca cgtaagcacc
     2161 tcgcgacagg cagacgaagg cgagaactta accgttcagc aactgaccat cgctggacat
     2221 gcactcctgt tcggcctgcg gcaggggatg tcgcgtacgg caaatagcca tggcatactg
     2281 gtccggcaat cattgcactg gcggggaaca acaatgccga tcgcaatcca ggacctggaa
     2341 agtggcccgg ggatttgccg aacgaatatc ccgcctttcc cgaccggccc gaattcgatg
     2401 tccggggcgg tatggtgacg gccttcgagg tcggtggcga catctacgac ttctatttca
     2461 tcgatgaccg ccgacctggc ttcgtcgtcg ctgacgcctc aggcaaaggc ctgccggcgg
     2521 ccatgttcat caccaacatg cgctcgatgc tgcgtccggc gtcgcatcgc gtcgcggatc
     2581 cgggggcatg tctgacactg gtcaatcaac tgctttgctt cgacaatcct gcaatgttgt
     2641 tcgccaccgc attctacgga gtgctggata ccgagaccgg cgaggtcgct ttcgccaacg
     2701 ccggccacaa tcccccgttg cacgtcgaac aaggcggggt cgcgacgccg gtgaagcacc
     2761 ttcgtgcacc gatgctcgga atgtttgaag aagttgtcta tcggaccggc acgctcactc
     2821 ttgcacctgg cgacacgcta tgccgaacgt aacgcccgca aaatatcgct gcctcgtttg
     2881 gccttcagat ccaggctgat ggtgccggag ggtttggcga tgacctccgc agctccgata
     2941 cggcgggctt ccaacgcttg cggcgagccc aactgagcca gcgacgaaag aatgatcact
     3001 ttggctgaac tggtcagacg ggcacgcttc aacacggcga tcccgtcgag cttcggcatc
     3061 tcgatatcga gcaaaaccag atccggcttg agcgcccgca tttgttcgag cgctggccac
     3121 atgatgcggc cgaactgatc atcgcaggtc agaccttggc gtgaagactt cccaggtcaa
     3181 taatgtagta atcggggtca gaagcgtcac gagccggcgg actgacgccg aagcgatgct
     3241 gtgggcttca accggtagtt gattagcgag gcaatcacct tttagcaaaa aacaatttct
     3301 gacctgaggc aatcctgcca tgcgccggaa gtccactgaa gttctgcata actttccgca
     3361 atggcacgta ttccagcgtc gagcctaccg ctacactgtg ccgacgaact aaaccaaata
     3421 aagagttggg agatgaaaca gatgtccgcg accccaatgg cgccattgcc accaaccgaa
     3481 atgccgtcag gccggtgggc gcaattatgg ctgggcgtcc tgtgcatgat gctgattgcc
     3541 aatttgcaat atgcctggac gctgttcgtg gggccaatcc gcgccgcgca tggctggagc
     3601 ctggccgaca tccagtgggc gtttaccatc ttcatcgcga ccgagacctg gatcaccccg
     3661 tttgccggtt acgctgtcga ttatatggga ccgcggcgtg gccccagact gatgatcctg
     3721 ctcggcggca tcgcggtcgg cctgggctgg gttatgaacg cctatgcaga cagtctgatg
     3781 ctgctttacg ccggagcggc aatctccggt ctgggcgccg gcggcatcta cgcgacctgc
     3841 gtcggcaatg cagtgaaatg gtttcccgac cggcgaggcc tggcggttgg gctgaccgcc
     3901 gcgggcttcg gggcgggcgc cgccctgact gtgatcccga tccggatgct gatcgaggcg
     3961 cagggctatg gtgctgcgtt cctctggttc ggcgccggcc aggggattat tttgatcatc
     4021 gtctccggca ttctgcgcgc gccggatcag attctggccg ctccggccgc ggtggtgcaa
     4081 cgtctcaatc agagtcggcg gagcttcacc agcggcgaaa tgttgcgttc gccgatcttc
     4141 tggctgatgt acgtcatgtt cgtgctgaat gctgcaaccg gactgatggc gacggcacaa
     4201 ttggcgccga tcgccaagga tttcggcatc gccaacagcc cgatcctgtt tggcgcgacg
     4261 gtgctgagtg tggcgctggt ggttgacaac atcctgaacg gtctggcgcg gccatttttc
     4321 ggctgggtgt cggacttcct cggccgtgag ctgacgatgg gaatcgcctt cttcctgggc
     4381 gcctgcagct acggactttt gactgtggcc gggcacggtg cctggacatt cgttatttgc
     4441 gcagggttga tcttcttcac ctggggagag attttcagtc tgttcccgtc gctgtgtacc
     4501 gatacgttcg ggccgaaatt cgccgcctcc aacgcggcct tactctatac tgccaaaggc
     4561 accgccgctt tgttggtgcc gttcgcgaat gtgctgcaaa gcgcaaccgg cgggtggggg
     4621 gcggtgttca cgatcgccgc cgtctccaac gtcgtggtgg cgctattggc ggttgccgcg
     4681 ctgcggccgt tacggcgccg gatcatgacg gtaccacagc cggggttgtc ggcggcgatg
     4741 cggtgaggaa gcaggatcgg ccggcgagcg aagcgtaccc tctccgacga tcgcgccaat
     4801 ctaagtagcc atgataggcg atgcgtcact ggcagcctgg cgcgatcccg agaccgctat
     4861 acacgcggcc tggagccggc caggcgcagc atcgagtcca ccggttccgg cgccgtcgtc
     4921 ctcggagaac agggcgccgg tttcgtgcag gtggcgttcg gcggagattt caacgccgga
     4981 acgtccggcg tcatcctggg cgataccgat ttgggaacgg gcacgctcaa tctggtcagg
     5041 aatctttcgg aacgacttgt gccgaagcct tcaagatcag ctactgagcg gcagtcgcga
     5101 tgcggttgaa tggcgacact gcggacctga ccctcaatcg atcaccgcct ggtagctcaa
     5161 cacccgcagt tcacggcgga tcggataggt actgctcggc agcagctgcg tcatcatgat
     5221 gacgatcatc tcctccgccg gatccaccca gaaggcagtg ctcgccgctc caccccaggc
     5281 gtactcgccc ggggttccca gaatttgcgc ctttgcggga tccagcatga ttgaaaagcc
     5341 cagcccgaac cctatgccat agtacgagct ctcactgaac ctgggttgtc ccatgtcggc
     5401 catatcgccc cgcaaatggt tggtggtcat cagctccacc gtcttgcggc ccagaatctg
     5461 gccaccggca ctcgcgcc
//
LOCUS       DATAVD010001140         1738 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_858046, whole genome shotgun sequence.
ACCESSION   DATAVD010001140 DATAVD010000000
VERSION     DATAVD010001140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_858046"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..980)
                     /locus_tag="VHX39_21760"
     CDS             complement(<1..980)
                     /locus_tag="VHX39_21760"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative peptidoglycan glycosyltransferase FtsW"
                     /protein_id="HEX3993805.1"
                     /translation="MPVLSREQRNPLSEWWWTVDRLQLGAIIALVLAGIILSLAASPP
                     VATRIGLDPFHFFNRHVLFLLPSFIVMIGVSFLSPRQIRRTALIVFAVSIALIVATLL
                     LGPEVKGSRRWITLIGVNIQASESAKPAFVVLAAWLFAESTRRPEMPATSMALVLLMT
                     LISLLVMEPDFGQTMLILMVWGSLFFIAGMRMIWVLGLGGAASAGLFAAYLLVPHVAG
                     RIKRFMNPASGDTFQVDTAMEAFYNGGWFGLGPGEGIAKRSLPDSHTDFVFAVAAEEF
                     GIILCLALLALYAFIVIRALSRAFSTEDMFARFAASGLAILFGVQAAINMS"
     gene            complement(1227..>1738)
                     /locus_tag="VHX39_21765"
     CDS             complement(1227..>1738)
                     /locus_tag="VHX39_21765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993806.1"
                     /translation="HGISRLPDVEDGKGIRRKFKSYPIGYFHIDIAEVRTAMGRLYLF
                     VAVIFVAVCAVTTGGVLYVFAFMSGFGFCKTVVHRSIPSPDGNRSIVIFEKECGATVP
                     FNTQASIAPVGSSFSPENSPPFFVISGRQDIFAGWRGNRIVEIAGGIPGGRIFKDDRR
                     VGEIQVEYK"
BASE COUNT          388 a          541 c          525 g          284 t
ORIGIN      
        1 gacatgttga tcgcggcctg cacgccgaac aggatggcca gccccgaggc tgcgaagcgg
       61 gcgaacatgt cctcggtgga gaaggcccgc gacagcgcgc ggatcacgat gaaggcgtac
      121 agcgcgagca gcgcgagaca caggatgatg ccgaattcct ccgccgccac cgcgaacacg
      181 aaatcggtgt ggctgtccgg caggctgcgc ttggcgatgc cttcgccggg gccgagcccg
      241 aaccagccgc cattgtagaa ggcctccatc gcggtatcga cctggaaggt gtcgccggaa
      301 gccgggttca tgaagcgctt gatgcggccg gcgacgtgcg gcaccagcag gtaggccgca
      361 aacagcccgg cgctggcagc acctccgagc cccagcaccc agatcatccg catgcccgcg
      421 atgaagaaca gcgaacccca gaccatcagg atcagcatgg tctggccgaa atcgggctcc
      481 atcaccagca gcgagatcag cgtcatcagc agcaccagcg ccatcgaggt cgccggcatc
      541 tccggtcgcc gcgtcgattc cgcaaacagc cacgccgcca gcaccacgaa ggcaggtttt
      601 gcggattccg acgcctggat gttgacgccg atcagggtga tccagcgccg cgagcccttg
      661 acctccggcc ctagcaacag cgtcgccacg atcagcgcga tcgagaccgc gaacacgatc
      721 agcgcggtgc ggcggatctg ccgcggcgac aggaacgaca cgccgatcat cacgatgaag
      781 gacggcagca ggaacagcac gtggcggttg aagaagtgga agggatcgag cccgatccgg
      841 gtcgccaccg gcgggctcgc tgccagcgac agaatgatgc cggccagtac cagtgcgatg
      901 atcgccccga gctgcaggcg gtccaccgtc caccaccatt cgctcagcgg gttgcgttgt
      961 tcacgggaga gaacgggcat ctgcattccc aaaggccgaa gggtttgccc attggtcgct
     1021 caggatggtt tcgaagcggt taatggcact cgtaagtttc ggtcgcttcg gcactccgct
     1081 tcgtcatgct cggcttgtcg gccatccacg tctcaggcac gtcgtggcaa gaaggacgtg
     1141 gatggccggg acgtgcccgg ccatgaccgc gccgggtggt gagggcttca cacagggggc
     1201 tcagacgttt ccgccgaccc tgcacgctac ttatattcaa cttgaatttc gccaacgcgc
     1261 cggtcgtcct taaaaatcct gccgcctgga ataccgccag caatttcaac tatgcgattc
     1321 ccacgccaac cagcaaagat gtcctgcctg ccggaaataa cgaaaaaagg aggagaattc
     1381 tcgggcgaaa aagagctacc aaccggagca atactggcct gagtattgaa cggaaccgtt
     1441 gccccgcatt ccttttcgaa aataacgatc gacctgttgc cgtccggaga cggtatcgat
     1501 ctgtgaacga cggttttaca aaagccgaag ccgctcatga atgcgaaaac ataaaggaca
     1561 ccgccagtcg tcacggcgca gacggcaaca aatatgacgg cgacgaagag atagagcctt
     1621 cccattgcag tgcggacctc ggcgatgtcg atgtggaagt atccaatcgg atagctcttg
     1681 aacttgcgcc ttataccctt gccatcctcc acgtcgggaa gccttgagat gccgtggc
//
LOCUS       DATAVD010001141         3191 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3271733, whole genome shotgun sequence.
ACCESSION   DATAVD010001141 DATAVD010000000
VERSION     DATAVD010001141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3191
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3271733"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..451
                     /locus_tag="VHX39_21770"
     CDS             <1..451
                     /locus_tag="VHX39_21770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX3993807.1"
                     /translation="MELVVGLSEGGANIQEADALYHVWGYAAGLDMTRRDLQNAAKKE
                     GKPWDMGKGFDYSAPIGLMVPASKCGHPAKGLIELKINGKVRQTSDLSKMIWNIPETI
                     AYLSRLVRLAPGDLIYTGTPENVAAVQRGDLLEGVVEGVGTVRTRIV"
     gene            451..1281
                     /locus_tag="VHX39_21775"
     CDS             451..1281
                     /locus_tag="VHX39_21775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018308280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEX3993808.1"
                     /translation="MPPRRKKPGQSLRVATWNINSLRLRIGLLSDLVAALDPDVICLQ
                     ETKVPDDLFPGDGPQALGYKHVVFRGMKSYNGVAVLSRLPLKHVDFAPDWCGKGDCRH
                     VSVEVDTKSGPVELHDFYVPAGGDIPDREANPKYAHKLDFIAEARNWFAARSGLQRTV
                     LVGDLNIAPLEHDVWSHKQLLDVVSHTPPETAGLNAWMNTCFIDAVRHFVPESEKVYT
                     WWSYRNRDWKVANRGRRLDHIWVTPDLKDALVKHTILTDARDWTRGSDHVPVCVELAL
                     "
     gene            complement(1324..1557)
                     /locus_tag="VHX39_21780"
     CDS             complement(1324..1557)
                     /locus_tag="VHX39_21780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993809.1"
                     /translation="MSATLDPLVMDLVAFVAKQPRPYDEVIDAWRTSCPRLTVWEDAI
                     DRGLITRHRAEDKTLIVQATSAGLCLLQQSGRR"
     gene            complement(1591..2130)
                     /locus_tag="VHX39_21785"
     CDS             complement(1591..2130)
                     /locus_tag="VHX39_21785"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3993810.1"
                     /translation="MGNIHARLAHVGVYAQDLPLLEKFYTTVLGLMVTDKGKGRAGVE
                     LAFMSGNPEAHHQFVLVSGRPETSGFNPIQQMSFMVDSLSELREVHNRALANGATGMR
                     VTCHGNAWSCYFQDPEGNTVEAYLDTPFHIPQPHGAPFDLQASDDEILRWTEDHCRAD
                     PGFMMMDEFKQQMRSKLAH"
     gene            2415..3092
                     /locus_tag="VHX39_21790"
     CDS             2415..3092
                     /locus_tag="VHX39_21790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993811.1"
                     /translation="MSNLNVDPADAALRRSFFRRLAGATALGVTGWLASRSEAQSAPG
                     QAAAEQDGPNWPGILRGRHRQMVDAYNVNNGSPLEFGHNFLASYASPEAATLVIILRA
                     GALPIALNSDIWAKYKIGESFKITDPETKAPAVKNPFLHPKPGVLRSDESAVDRLLEA
                     GVMFGACDVALHGQSKRLASNAGVTADAAAKDWTANVVPGITILPSGVWGVNRAQEAG
                     CTYCSGG"
BASE COUNT          631 a          989 c         1005 g          566 t
ORIGIN      
        1 aatggaactg gtcgtgggcc ttagcgaggg cggcgccaac attcaggaag ccgacgccct
       61 gtaccatgtc tggggttatg ccgccggcct cgacatgacc cgccgcgatt tgcagaacgc
      121 ggcgaagaag gagggcaagc cctgggacat gggcaagggc tttgactatt ccgcaccgat
      181 cggcctgatg gtgccggcgt cgaaatgcgg ccatcccgcc aagggactga tcgaactgaa
      241 gatcaatggc aaagtccggc agacctccga cctgtcgaaa atgatctgga acattcccga
      301 gacgatcgct tatctctcgc gtttggtgcg gcttgcaccg ggcgacctga tctataccgg
      361 aacgcccgag aacgttgccg ccgtgcaacg cggcgatctg ctcgagggcg tggtcgaggg
      421 cgtcggcaca gtgcggaccc gcatcgtctg atgccacccc gacgtaaaaa gcctgggcaa
      481 tcgctgcggg tcgcgacctg gaacatcaat tcgcttcggt tacggattgg cttgctgtcc
      541 gacctcgtgg cagcgctcga tcccgatgtg atctgcttgc aggaaaccaa ggtcccggat
      601 gatttgttcc cgggcgacgg cccacaggcg cttggttaca agcacgtcgt tttccgcggg
      661 atgaagagct acaacggcgt cgcggtcctg tcgcgactgc cgctgaaaca cgtcgatttt
      721 gcgcccgact ggtgcggcaa gggcgattgc cggcacgtct ccgttgaagt tgacacgaaa
      781 tccgggccgg tcgaattgca tgacttttac gtgcccgccg gcggcgacat cccggaccgc
      841 gaggcaaacc cgaaatacgc ccacaagctc gatttcatcg ccgaggcccg caactggttc
      901 gccgcgcgca gcgggctgca acgcacggtg ctggtcggcg acctcaacat cgcgccgctg
      961 gagcacgatg tctggagcca caaacaattg ctcgatgtgg ttagccatac gccgccggag
     1021 accgcgggcc tgaacgcctg gatgaacacc tgcttcatcg acgcagtgcg ccacttcgtt
     1081 ccggaatccg agaaagtcta cacgtggtgg tcgtaccgca accgcgactg gaaggttgcc
     1141 aaccgcggcc gccggctgga tcacatctgg gtcaccccgg acctgaaaga cgccctggtc
     1201 aaacacacga tcctgaccga cgcccgcgac tggacgaggg gctcggatca cgtgccggtg
     1261 tgcgtggaac tggcgttgta ggacgaccgg accagattcc tgctgcaagc ccagggacgg
     1321 gcgttaccgg cgcccgctct gctgcagcag gcacaggccg gcgctggtgg cttgcacgat
     1381 caacgtcttg tcttcggcgc ggtggcgcgt gatcaggcct cgatcgatcg catcctccca
     1441 caccgtcaga cgcggacagg aggtgcgcca ggcgtcgatc acctcgtcat acggccgcgg
     1501 ctgcttcgcc acgaacgcga cgaggtccat caccaaagga tcaagcgtcg ccgacatcac
     1561 gcacctcctg cggaacgcaa tccggcacgc tcagtgcgcc agtttcgacc gcatctgctg
     1621 tttgaactcg tccatcatca tgaagccggg atcggcgcgg cagtggtcct cggtccagcg
     1681 caggatctca tcgtccgaag cttgcaggtc gaatggcgcg ccatgcggtt ggggaatgtg
     1741 gaacggggtg tcgagatatg cctcgacggt attgccctcg ggatcctgga agtagcacga
     1801 ccaggcgttg ccgtggcagg tgacgcgcat gccggtggca ccgttcgcca gcgcccggtt
     1861 gtgcacctca cgcaactccg acaacgaatc gaccatgaac gacatttgct ggatcggatt
     1921 gaaccccgac gtctccggcc ggcctgaaac caggacgaac tgatggtgag cttcgggatt
     1981 gccgctcatg aaggccaact cgaccccggc ccgccctttg cccttatcgg tgaccatcag
     2041 gccaagcacg gtcgtgtaga acttttccaa tagcggcagg tcctgcgcgt agacgccgac
     2101 gtgagccagc ctggcatgga tgttacccat gactgtatcc tccaaattga tggacgacat
     2161 agaaggacgg gacagcggcg actgcaaggg gattccgcgg gcgtcaacgt caggacattg
     2221 gcctgcgacc ggtcaggccg ggcgggggat caatggctgt ttggctcaga gcagcagtag
     2281 atcgctgcgg gttcgtttct tgcagctcga acccgaagcg gccatcctgg cgcccgcaga
     2341 ttcccggcac caggcgcgcg tcagcccatg cagcctgcgg aaaccctacg aacggtgcag
     2401 caatggagca gccgatgagc aatctcaacg tggacccggc cgatgcggct ctgcggcgga
     2461 gtttcttccg tcgtcttgcc ggtgcgacag cactcggggt cacgggatgg ctggcttcgc
     2521 ggtcagaagc gcagtctgca cctggtcagg ctgcggctga gcaggatggt cccaattggc
     2581 cggggatctt acgtggacgc catcgccaga tggtcgacgc atacaatgtc aacaacggct
     2641 cgccactgga attcggccac aacttcctgg cctcgtacgc ctcgccggag gccgccacgc
     2701 tggttatcat cctacgtgcc ggcgcattgc cgatcgcact caacagcgac atctgggcca
     2761 aatacaaaat tggcgaatca ttcaagatca ctgacccgga gaccaaggcg ccggcagtga
     2821 aaaacccgtt tctgcatccg aaacccgggg tgctacggtc cgatgagtca gcggtcgacc
     2881 ggctgctcga ggcaggcgtg atgttcggtg cctgcgatgt ggcgctgcac ggccaaagca
     2941 agcgcctcgc cagcaatgcc ggtgtaaccg cggatgcggc agcaaaagac tggaccgcga
     3001 acgtggtgcc cggcatcacc atcctcccct cgggtgtatg gggggtgaac cgggcgcagg
     3061 aagcgggctg cacttattgc tcgggcgggt gataacgccg acccgccggc ttcaaacaat
     3121 gccgggaggg ggtaacacca atggatatca aacacgtcgt cgtcttgatg atggaaaacc
     3181 gctcgttcga c
//
LOCUS       DATAVD010001142         3250 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1040058, whole genome shotgun sequence.
ACCESSION   DATAVD010001142 DATAVD010000000
VERSION     DATAVD010001142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3250
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1040058"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(439..669)
                     /locus_tag="VHX39_21795"
     CDS             complement(439..669)
                     /locus_tag="VHX39_21795"
                     /inference="COORDINATES: protein motif:HMM:NF040101.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6429 family protein"
                     /protein_id="HEX3993812.1"
                     /translation="MDIDEDKIDEAVLALLWLTRCGEMRTWKGHDWDAMDRLFEKGMI
                     EDPKSKAKSVWFTEEGLAESERLFGKLFGKAG"
     gene            793..2472
                     /gene="ettA"
                     /locus_tag="VHX39_21800"
     CDS             793..2472
                     /gene="ettA"
                     /locus_tag="VHX39_21800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006116781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEX3993813.1"
                     /translation="MASYQYVYVLKDLTKAFQGGREVFKGITLSFLPGVKIGVLGVNG
                     AGKSTLMKIMAGIETEYGGEAWAAPGATVGYLAQEPPLDPTKTVGENVEEAFVELKAA
                     LNRFNEISMLFAEPMDDDAMNTLLAEQGDLQELIDSKDGWELDRKVDIALDALRCPPA
                     DSPITMLSGGERRRVALCRLLLEKPDLLLLDEPTNHLDAESVAWLEHTLHDYAGTVMV
                     VTHDRYFLDNVTGWMLELERGRGYPFEGNYSSWLQQKRKRLQQEEKEESARQRALAAE
                     SEWIAASPRARQTKSRARIAKYEEMLQKSQELVSGVAEIAIPPGPRLGNVVIEAEDLR
                     KGYGNNVLIDGLNFKLPPGGIVGVIGPNGAGKTTLFRMITGQEVPDSGSLRVGETVKL
                     GYVDQSRDSLDPDKTVWQEISGGDEVIYLGKRAVQSRAYVAAFNFKGSDQQKKVGILS
                     GGERNRVHLAKMLKIEHNVLLLDEPTNDLDVDTLRALEEALAEFAGCAVIISHDRWFL
                     DRLATHILAFEGDSHVEWFEGNFQAYEEDKRRRLGADATEPHRIKYRPLAR"
     gene            2554..2988
                     /locus_tag="VHX39_21805"
     CDS             2554..2988
                     /locus_tag="VHX39_21805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2384 domain-containing protein"
                     /protein_id="HEX3993814.1"
                     /translation="MSATTAPAIHGMPAQPLTFARESDRARLTPAGLAGLKAVTAAWR
                     LSGQEAADLLGVSASTWDRIRADTWRQSLSQDQLMRVSAIVGIYKGLHLLFADDMADR
                     WIRLRNSGPLFANLTPVEAMQDGGIPGMIEIRRYIDALRGGL"
BASE COUNT          623 a          976 c         1054 g          597 t
ORIGIN      
        1 caggtctcga tttccgccgg ggagagggcg gggaggggaa acaggaagcc gttgtagcga
       61 aaggattcca gttggtcctg tgtcagcgct ttcattgggt ggtctccctt tttggcattg
      121 ggtgcagtct gcaccgggca ctgcgaacag tcatagggcg ttgttttggg gcgccgtttg
      181 ggggttgtgg tccagtttga acggtgcagc ctggcggcga ccaccggtga ctatgaagct
      241 ttgggaacta tataggcaga ccatgcagcc cagggcgctg acgcacccgc cgcgcctcgc
      301 tcggcagcag aactggccgg gtggggaaat atgggtgagg cgcccgctga aaccatggac
      361 gtgacgccag agcgccggcc agatacgcca agcagtacgc gtctagccgt gacactggca
      421 gtgcaggtag gccggtccct acccagcctt cccgaacagc ttcccgaata gccgctcgct
      481 ttccgccagc ccttcctcgg tgaaccacac ggacttggcc ttgctcttgg gatcctcgat
      541 catccccttc tcgaacaggc ggtccatcgc gtcccagtcg tgacccttcc acgtgcgcat
      601 ctcgccgcac cgcgtcagcc acagcagcgc cagcaccgcc tcgtcgatct tgtcttcatc
      661 gatgtccatt tccgtctccc caggcttcat acccccggcc ccggttcctc aaccccctgg
      721 aacccgcacg tcccgctacc cacactgggc aatgcgggtt agaacccgct gcaaacagcg
      781 aagcgacaga tcatggccag ctaccagtac gtctatgtgt taaaggattt gaccaaggcc
      841 tttcagggtg ggcgggaggt gttcaagggc atcaccctgt cgttcctgcc gggcgtaaag
      901 atcggtgtgc tcggcgtcaa cggggccggc aaatcgacgc tgatgaagat catggccggc
      961 atcgagaccg aatacggcgg cgaggcctgg gccgccccag gtgccaccgt cggctatctg
     1021 gcgcaggaac ccccgctcga ccccaccaag accgtgggcg agaacgtgga ggaagccttt
     1081 gtcgaactga aagccgccct gaaccggttc aacgaaatct ccatgctgtt tgccgaaccc
     1141 atggacgacg acgcgatgaa cacgctgctc gccgaacagg gcgatttgca ggaactgatc
     1201 gactccaagg acggctggga actcgaccgc aaggtggaca tcgcgctgga cgccctgcgc
     1261 tgcccgcccg ccgactcccc catcaccatg ctgtcgggcg gtgaacgccg ccgcgtcgcg
     1321 ctgtgccggt tgctgctgga aaaacccgat ctgctgctgc tggacgaacc caccaaccat
     1381 ctggacgccg agagcgtcgc gtggctggag catacgctgc acgactatgc cggcaccgtg
     1441 atggtggtca cccatgaccg ctacttcctg gacaatgtca ccggctggat gctggagctg
     1501 gagcgtgggc ggggctatcc gttcgagggc aattattcct cctggctgca acagaagcgc
     1561 aagcggttgc agcaggagga gaaggaagaa tcggctcggc agcgcgcctt ggcggcggaa
     1621 tcggagtgga tcgcggcatc gcctcgggcg cggcagacga aaagccgagc gcgtatcgcg
     1681 aaatacgagg agatgctgca gaagtcgcag gaactggtga gcggcgtggc ggaaatcgct
     1741 attccgccgg gtcctcggct ggggaacgtg gtgatcgagg ccgaggattt acggaaaggc
     1801 tacggcaaca acgttctgat cgacgggctg aacttcaagc tgccgccggg tgggatcgtt
     1861 ggcgtgatcg ggccgaacgg tgcgggcaag acgacgctgt tccggatgat taccgggcag
     1921 gaggtgcctg attcgggatc cctgcgggtt ggggagacgg tgaagctggg gtatgtggat
     1981 cagtcgcgcg acagcctgga tccggacaag acggtctggc aggagatcag cggcggcgat
     2041 gaggtgattt atctcggcaa gcgggcggtg cagtcgcggg cctatgtggc ggcgttcaat
     2101 ttcaaagggt cggatcagca gaagaaagtc ggcatcctgt cgggtggcga gcgcaaccgg
     2161 gtgcatctcg cgaagatgct gaagatcgag cacaacgtgc tgctgttgga tgagccgacc
     2221 aacgatctgg atgtcgatac gctgcgggcg ctggaggagg cgctggcgga gtttgccggc
     2281 tgtgcggtga tcatcagcca tgaccggtgg tttctcgatc ggttggcgac gcatatcctg
     2341 gcgttcgagg gcgacagtca tgtcgagtgg ttcgaaggca acttccaggc gtacgaggaa
     2401 gacaagcggc ggcgattggg ggcggatgcg accgaacccc accgcatcaa ataccgtccc
     2461 ctcgctcggt aatccccagt tggtgcttgc aattgcgtca tgcgatgcca agcttcgttg
     2521 cacgaggagt ttgtgcatga cgaatttggc cgcatgagcg ccaccaccgc cccggcaatc
     2581 cacggaatgc cggcccagcc gctgaccttc gcgcgcgaaa gcgatcgggc gcggctgacc
     2641 ccggctggcc tggccggcct gaaagcggtc actgctgcct ggcgcctcag cgggcaggag
     2701 gccgccgatc tgctgggtgt atccgccagc acctgggatc gtattagggc cgacacctgg
     2761 cggcagtcgc tgtcgcagga ccagttgatg cgggtctccg ccatcgttgg catctacaag
     2821 ggcctgcacc tgctgttcgc cgacgacatg gcggaccgct ggatacggtt aagaaacagt
     2881 ggcccgctgt tcgccaacct gaccccggtc gaggccatgc aggacggcgg cattcccggc
     2941 atgatcgaga tcagacgtta catcgacgcg ctgcgcggtg ggctgtagcc acccgcgggg
     3001 cggttatcat tcgttgctga acgagtgtct ttctggtcct cctgctttca tcgcgtgccg
     3061 tgaacatata gtgaacatac cgctgatgtc cacccctatc tacagccgcg aaaccacgct
     3121 accgagacgg ctcgccgcca cagtcaataa gatcgaccac ggaacgacct atcgcgcgtt
     3181 atgatacaaa gcattaacga ttaccccgtc gcgaccatcg ccatcgagcg tgccatccgc
     3241 ctggtctcta
//
LOCUS       DATAVD010001143         1684 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_858195, whole genome shotgun sequence.
ACCESSION   DATAVD010001143 DATAVD010000000
VERSION     DATAVD010001143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_858195"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            293..463
                     /locus_tag="VHX39_21810"
     CDS             293..463
                     /locus_tag="VHX39_21810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993815.1"
                     /translation="MAALVAEAKQLLAGAQQEIVTAQAEDHAAQRPACPHCGGVCRVK
                     DYRPHTVVTLFG"
     gene            492..977
                     /locus_tag="VHX39_21815"
     CDS             492..977
                     /locus_tag="VHX39_21815"
                     /inference="COORDINATES: protein motif:HMM:NF014626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006974 - DNA damage response [Evidence
                     IEA];
                     GO_process: GO:0018142 - protein-DNA covalent
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase family
                     protein"
                     /protein_id="HEX3993816.1"
                     /translation="MPCAARPRLARLAVALPLDPELDRPQAHLSALLTYRTAAVQPTW
                     NIAPTQDAMVVRRDEETGERHLDVLKWGLIPRFTKDATKARKLIPRTELQPRVGCWLR
                     TVSERFSEGPRNCIALRIHGSMHVGHSPPADGRQAIRDLCYELLTDASIVARSQRWAG
                     W"
     gene            complement(917..>1684)
                     /locus_tag="VHX39_21820"
     CDS             complement(917..>1684)
                     /locus_tag="VHX39_21820"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3993817.1"
                     /translation="HMLKDELFVRTPEGMQPTPRAERMAEPIHQALQEIRVVLEADEF
                     DPSEASRTFTIAANNYAARAVIPAFVRHVATLAPGVVVEVRPTGMLHTLDLLDAGATE
                     VALEALTEGGERFKCVGLLEDDYVAILSSDHPIAAEPQLSVEHIAGLPNITVTSSGDD
                     TQFVDDALAERGLARHVWARVPLHSLLSVLIGSRALAVVPRRVAADFASTSPLIIRPL
                     PFMSPRVSLAMIWHRRLDYHPAHRWLRATMLASVKSS"
BASE COUNT          318 a          508 c          539 g          319 t
ORIGIN      
        1 gttgggccgg catcaattca tcaaggttgg gtggcggggt cacacacagg ttgaatcgga
       61 gattgcggtc tgtgcaaatc cgtaaaatca ggatcgcggt cgatcgtcgc ggcagtgtgg
      121 tatttccgac tcaccgggcc aacgctgtgc cgcccgacgt agatcagttc acactgcgcg
      181 gacgccctca aacatgaccc ggtcggcaaa tggcaatccg ccagcgcatc atgcgtcatt
      241 gcccggcctt ttgcccctat tacagcgtgg ggggacttcc gcgaaactgg gggtggcggc
      301 gctggtggcc gaggcgaagc agctgctggc gggtgctcaa caggagatcg tcaccgcgca
      361 agccgaagac catgccgctc agcggccggc ttgcccacac tgcggtggcg tttgtcgggt
      421 caaggactac cggccgcaca cagtcgtgac gttgtttggc taggtcacga tgcgactgcc
      481 gcgccttcgg tgtgccgtgt gcggcaagac cgaggctggc taggctggcc gtcgcactgc
      541 cgctcgaccc ggagctggat cggcctcagg cgcatctgtc cgcgctcctg acctaccgaa
      601 cagccgctgt ccagccgacg tggaacatag cgccgacgca ggatgcgatg gtggtgcgac
      661 gggacgagga gaccggcgag cgccacctcg acgttctcaa atggggcctg atccctcggt
      721 ttaccaagga cgctacgaag gctcgaaagc tcattcctcg gacggaacta cagccccgcg
      781 tgggctgttg gttgcgtacc gtctctgaga gatttagcga gggcccgcgg aattgcatcg
      841 ccctgcgtat tcatggctcg atgcatgtcg ggcatagtcc gcccgctgac ggacgccagg
      901 caatacggga cctctgctac gagcttttga ccgatgccag cattgttgca cgcagccagc
      961 gatgggctgg gtggtagtcg agccggcgat gccagatcat cgcgagtgac acacggggtg
     1021 acatgaatgg cagcggccgg atgatcagcg ggctggtgct tgcgaaatcc gcggcaaccc
     1081 gccttggtac gactgcaagt gctctggatc caatgagaac cgacagcaag gaatgcagtg
     1141 ggactcttgc ccagacgtgg cgcgcaaggc cacgttcggc gagcgcatca tcaacaaact
     1201 gcgtatcgtc accgctggag gtgacggtga tgttgggcaa gcctgcgata tgctcgaccg
     1261 aaagctgcgg ttcggcggct atgggatgat cgctcgacag aattgccaca tagtcgtctt
     1321 ccaggaggcc aacacacttg aatcgttcgc ctccttcggt cagtgcttcc agcgccactt
     1381 ccgtcgcgcc agcgtccagt agatcgagcg tgtgcaacat gccggtcggc ctgacttcga
     1441 ccaccacccc aggcgccagc gtggccacat ggcgcacgaa ggccggaatg acggcgcgcg
     1501 cggcatagtt gttggcggca atcgtaaatg ttcgcgatgc ctcggacgga tcaaactcat
     1561 ccgcctcaag aacgacccga atttcttgca gtgcctggtg aatcggctct gccatccgtt
     1621 ctgcccgcgg ggttggctgc atcccctccg gcgtgcggac gaacagttcg tccttcaaca
     1681 tgtg
//
LOCUS       DATAVD010001144         1754 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_296152, whole genome shotgun sequence.
ACCESSION   DATAVD010001144 DATAVD010000000
VERSION     DATAVD010001144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1754
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296152"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..931)
                     /gene="cbiB"
                     /locus_tag="VHX39_21825"
     CDS             complement(<1..931)
                     /gene="cbiB"
                     /locus_tag="VHX39_21825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014240773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016880 - acid-ammonia (or amide) ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-phosphate synthase CbiB"
                     /protein_id="HEX3993818.1"
                     /translation="MQIISNVELALAALLVEAAVGYPAMVYRAIGHPVTWIGALLSGL
                     DKRLNSPLRTEAIRRALGVLTLVVPLGVAAGAAFALTRVLSFSRYGAALLVLAATSLL
                     AQRSLYHHVRTVADGLERNGLDAGRAEVAKIVGRDPAVLDVAGVARAAIESLAENFSD
                     GVVAPAFWLALAGLPGAAVYKAANTADSMIGHRTERYAAFGWAAARFDDVVNLPASRL
                     AALLLILAAVATGMSPISAARAVWHDASRHRSPNAGWPEAAMAGALGLSLAGPRVYAG
                     VRVDDVFMGNGRRDATAADIRRALLLYRVACFAG"
     gene            930..>1754
                     /locus_tag="VHX39_21830"
     CDS             930..>1754
                     /locus_tag="VHX39_21830"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine-phosphate decarboxylase"
                     /protein_id="HEX3993819.1"
                     /translation="MTKRETTPEGADELRYHGGNINLARGRFPNAPQPWIDLSTGINP
                     VPYPVGEIPQTMWTRLPEPAQLATLEAAARSAYGAGPLAEVVAAPGTQALIQWLPRVV
                     PARRVGILRFTYGEHETCWRAAGADVSTVETLAEVAAFDIGVVVNPNNPDGHLIEPDV
                     LAETARSMAQRGGQLIVDEAFMDVCASRDSLIPRLPDAPAIVLRSFGKIYGLAGIRLG
                     FAVVQTAVAASIRQAIGPWAVSGPAIDVGRRALSDAAWLSETVARLQRRSARLDRLL"
BASE COUNT          314 a          583 c          575 g          282 t
ORIGIN      
        1 atccggcaaa gcaggcgacc cgatacagca acagcgcgcg gcggatgtcc gcagctgttg
       61 cgtctcgcct accgttgccc atgaacacgt catcgacgcg cacgcctgcg taaaccctgg
      121 gtccggccag gctgaggcca agcgcaccgg ccatcgctgc ctcaggccaa cccgcgttgg
      181 gcgaacggtg gcgggatgcg tcgtgccaga ccgcccgtgc cgcagatata ggagacatgc
      241 cggtggcgac ggcggccagg atgagcaaca gcgccgcaag gcgcgatgcc ggcaggttga
      301 ccacatcgtc gaaccgcgct gcggcccaac cgaacgcggc ataacgctcg gtgcggtgtc
      361 cgatcatcga gtccgccgtg ttggctgcct tgtagaccgc cgcgccgggc aacccggcga
      421 gcgccagcca gaacgccgga gcaaccacac cgtcggagaa attctccgcc aggctctcga
      481 tcgccgcccg agccaccccg gctacgtcca gaactgccgg gtcgcgtccg acaattttcg
      541 cgacctcggc gcggcctgca tccaagccgt tccgttccag cccatccgcg accgtccgga
      601 catggtggta caggcttctc tgggccagca ggctggtggc cgccaggacc aacaacgcgg
      661 caccgtaccg gctgaacgac agaacgcgcg tcagagcgaa ggctgcgccc gcggcgacac
      721 cgagcggaac gacgagggtg aggacgccca atgctcgccg gatcgcctca gttcgaagcg
      781 gcgaattgag ccgcttgtcc agcccagaga gcaaagcccc aatccaggtg acaggatgac
      841 cgatggcgcg atagaccatc gccggatagc caaccgccgc ctccacgagg agagcggcca
      901 gcgccagctc gacgttggaa ataatctgca tgacgaagcg ggaaacgaca ccggaaggtg
      961 ccgacgagct acggtatcac ggcggcaata tcaacctcgc ccgtggccgg tttccaaatg
     1021 cgccgcagcc ctggatcgat ctgtcgaccg ggatcaatcc ggtgccttac ccggtcggtg
     1081 agatcccaca aaccatgtgg acccggctgc ccgagcccgc gcagcttgcg acgcttgagg
     1141 ccgcggcgcg ttctgcgtac ggcgccgggc cgttggcaga ggtcgtcgcg gcacccggca
     1201 ctcaggcgct gatccaatgg ttgcccagag ttgtcccggc acggcgtgtc ggcattctgc
     1261 gtttcacgta cggtgagcac gagacttgct ggcgagccgc gggggcagac gtcagcacgg
     1321 tcgaaacact tgccgaggtt gctgcgttcg atatcggcgt ggtggtgaac cccaacaatc
     1381 cggacggcca cctgattgag ccggacgttt tggctgagac cgcgcggtcg atggcgcaac
     1441 gtggcgggca attgattgtc gatgaagcat tcatggacgt ttgcgcgtcg cgggacagtc
     1501 tcatccctcg tctgcccgac gcgccagcca tcgtcttgcg ctcgttcggt aagatctatg
     1561 gtctggccgg aattcgcctt ggctttgccg tggtccagac cgcggttgcc gcctcgatac
     1621 gtcaggcaat cggaccctgg gccgtctcgg gtccggcgat cgacgttggc cggcgtgccc
     1681 tgtcggatgc cgcgtggttg tccgagactg tggcacggtt gcagcgtcgg tcagcccgcc
     1741 tggaccggtt gctt
//
LOCUS       DATAVD010001145         3050 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3272290, whole genome shotgun sequence.
ACCESSION   DATAVD010001145 DATAVD010000000
VERSION     DATAVD010001145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3050
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3272290"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..932)
                     /locus_tag="VHX39_21835"
     CDS             complement(96..932)
                     /locus_tag="VHX39_21835"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008888770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HEX3993820.1"
                     /translation="MAQAPGYFHLHLISDATGETLITVARAAAAQYVKMMPVEHMHPL
                     VRTQKQLDRVLAEIEEAPGIVLYTLLEDDLVERLEAKCREFSLPCLSILGPVLHLFQA
                     YLGAETTHKVGAQHTLNAEYFRRIDALNYTMLHDDGQQADDLEEADVVLVGVSRTSKT
                     PTSIYLANRGVKTANVPLVPGLPLTPGVEKLAHPLVVGLYASPERIVQIRQNRLLGLK
                     VQSDDDQYVDRHAVAEEIAMSRRLCAKHSWPLIDVTRRSIEETAAAVMALLVERRRHR
                     VS"
     gene            1326..2354
                     /gene="hemE"
                     /locus_tag="VHX39_21840"
     CDS             1326..2354
                     /gene="hemE"
                     /locus_tag="VHX39_21840"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEX3993821.1"
                     /translation="MTKPLLNALAGQSSAIPPIWLMRQAGRYLPEYRAIRQEVASFME
                     LCLNPALAAEVTLQPIRRFGFDAAILFSDILVVPYALGQRVWFEGGEGPQLDALAEPS
                     AVKRLATEIDHGKLAPIYETIARVKQDLPPAVTLLGFCGAPWTVATYMIAGRGTSDQR
                     PARLFAYQHPDAFTGLIDRLVEASASYLVRQFDAGVDAVQIFDTWAGVLPDDEFRKWC
                     IMPTAKIVAAVRQHIPAARIIGFPRGAGTRLEAYAEGIPVDAVGLDWMIDPGFARQRI
                     QRKRTVQGNLDPLALLAGGAALDHGIEAIVETFGQGPFIFNLGHGVLPDTPIAHVERL
                     VARVRRAR"
     gene            2370..2813
                     /gene="hemJ"
                     /locus_tag="VHX39_21845"
     CDS             2370..2813
                     /gene="hemJ"
                     /locus_tag="VHX39_21845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008854570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase HemJ"
                     /protein_id="HEX3993822.1"
                     /translation="MAAYQWIKAFHIISVIAWMAGMLYLPRLYVYHCAAEKGSVQSET
                     FKVMERRLLRGIINPAMVATIILGLWLAWLGPDSRYGWFASGWLQAKIALVLMLSFVH
                     GLLARWRRDFAADRNQHSAKFYRLINEIPTVLMIIIVLLVVLKPF"
BASE COUNT          565 a          913 c          933 g          639 t
ORIGIN      
        1 ctcgaccggc acgccggcgg cgtcgagcag cgcgcggcgg atggcactgc gcgatgccag
       61 cacgagcggc gcgctggcaa gccataaccc agtactcacg acacccgatg ccggcggcgc
      121 tcgaccagga gcgccatgac cgccgccgcg gtctcttcga tggatcggcg cgtcacatcg
      181 atcagcggcc agctatgctt ggcgcaaagc cggcgcgaca ttgcgatttc ctcggccacc
      241 gcgtggcggt cgacatactg gtcgtcgtcg ctttggactt tgaggccgag caaccggttc
      301 tgccgaatct gcacgatccg ctccgggctg gcatacaagc cgaccaccag cggatgcgcg
      361 agcttttcga cgccaggcgt cagcggcagt cccggcacca gcggcacgtt cgcggtcttt
      421 acgccccgat tggcgaggta aatcgatgtc ggcgtcttcg aggtccgcga cacgccgacc
      481 agcacaacat cggcttcttc caggtcatcc gcctgctggc cgtcatcgtg cagcatggtg
      541 tagttgagcg catcgatccg gcggaaatat tcggcattaa gcgtgtgctg cgcgccgacc
      601 ttgtgggtcg tctcggcacc gaggtaagcc tggaataagt gcaggaccgg gccgaggatc
      661 gacaggcacg gcaagctaaa ttcacggcac tttgcttcca agcgctcgac cagatcatcc
      721 tcgagcaagg tgtaaagcac gatgccgggc gcctcttcga tttccgccag cacccggtca
      781 agctgctttt gggtgcgaac caggggatgc atgtgctcga ccggcatcat tttgacgtat
      841 tgcgccgcgg cggcgcgggc caccgtgatc agggtctcac cggtggcgtc cgaaatcaga
      901 tggagatgga aataaccggg tgcctgcgcc atggaaccgt cgaaagcagt cgttgtcagg
      961 agccgtggaa aacctgtcga taatcgggga gaaggccacg gctttacccc tcgcgcaagc
     1021 gtgctggccg gctcgaccgc tcgcccgtcc acatctctcc accattgtgc ttccgggcgg
     1081 caccgccaag ccggacaatg gtaagatgtg gatggcggcg gcaggccgtt atcaaaaagc
     1141 cctgctaatg cctgacaatc gtgcggacca tcgcaaagat cggctgaggt gaagcgcctt
     1201 gtgcatgtgg gcaaggtgtg gatgcagtgt gtgcggcgct ttatgagtcc aatccacact
     1261 taaaatacta caacagactt tcttatagat aatttggatt agattagagc gtggcggaca
     1321 acacggtgac gaaacctctg ctcaacgcat tggcaggtca gagcagtgca attcccccga
     1381 tctggttgat gcggcaggct ggccgctatc tgccggaata ccgtgccatc cgccaagagg
     1441 tcgcaagctt catggagctg tgcctcaacc cggcccttgc tgccgaggtg acattgcagc
     1501 cgatccggcg tttcggtttt gatgcggcga ttctcttttc ggacattttg gtggtgccct
     1561 atgcactcgg ccaacgggta tggttcgaag gcggcgaggg cccacagctt gacgcgctgg
     1621 cagagccatc ggcggtcaag cggttggcga cagagatcga tcatggaaag ctggcgccaa
     1681 tttacgagac catcgcgcgg gtcaaacagg atttgccgcc ggcggtaact ctgctcggct
     1741 tctgtggggc gccgtggacg gttgcgacct acatgatcgc cggacgcggt acatccgacc
     1801 agcgcccggc gcggctgttt gcctatcaac atcccgatgc attcaccgga ttgattgatc
     1861 gattggttga ggcctccgcg agctacctgg tcaggcagtt cgacgccggg gtcgatgccg
     1921 tgcaaatttt cgacacttgg gcgggagtct tgccggatga tgagttccgc aaatggtgca
     1981 tcatgccgac agcgaagatt gttgcggcgg ttcggcaaca cattccggca gcacgaatca
     2041 ttggctttcc acgcggcgcc ggcaccaggc ttgaggccta tgcggaaggc atcccggtcg
     2101 acgcggtggg gctcgattgg atgatcgatc ccggctttgc gaggcagcgg attcagcgca
     2161 agcgaaccgt ccagggcaat ctcgatccgc tggcgctgct cgccggtggt gctgccctcg
     2221 accacggcat tgaggctatt gtcgaaacat tcgggcaggg tccgttcatc ttcaatctcg
     2281 gccacggtgt gttaccggat acgccgatcg ctcacgtcga acgtctggtt gcccgggtgc
     2341 gtcgggcgcg gtgagcacgg agagcgagct tggccgccta tcaatggatc aaggcgttcc
     2401 acatcatatc cgtcatcgcc tggatggcgg ggatgctcta tctgccgcgg ctttatgtct
     2461 accattgtgc cgccgagaaa ggctcggtgc agtcggagac cttcaaggtg atggagcggc
     2521 ggcttttacg cggcatcatc aatccggcca tggttgcgac catcatattg gggctgtggc
     2581 tggcgtggct cggccctgat tctcgctacg gctggttcgc ctcgggctgg ttgcaagcca
     2641 agatcgcgct ggtgctgatg ctgtccttcg tgcacggctt actggctcgc tggcgccgcg
     2701 atttcgccgc tgaccgcaac cagcattccg caaaattcta taggcttatc aatgaaatac
     2761 ctaccgtcct gatgatcatt atcgtactgc tcgtggtgct gaaaccgttc tgactttcgt
     2821 gcgttcttaa ctgcgaaaca cacgcgccct cttgcttgat cggcagtctt ttcatatctt
     2881 ccctacatcc cacccaacgt aggcggatgc agttgagttg tggctccagc ggactggagc
     2941 cggtctatgc atcgggcccc ggagctttct ccgccaagcc ctcctacgcg ctttaagcca
     3001 gcgacctccc acctcaactc gccgctggcc cgatttccat aggacattct
//
LOCUS       DATAVD010001146         3412 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2716774, whole genome shotgun sequence.
ACCESSION   DATAVD010001146 DATAVD010000000
VERSION     DATAVD010001146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3412
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2716774"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1495
                     /locus_tag="VHX39_21850"
     CDS             <1..1495
                     /locus_tag="VHX39_21850"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3993823.1"
                     /translation="TVIALAAFGGAAIMAWLLALYLARPVRSVATTAEAVLEGNDEVS
                     VPSFHGLVPYEIRRLGAAFNTMLDDQRRRAAETRQALLQAETSNTAKSQFLANMSHEI
                     RTPMNGVVGMIELMKLTELSPAQRRYVETATQSSQSLLRLIDDILDLSRIEVGRLELE
                     HAPFHLPSLIHDVRMLFADQARTKGLTLMTTLPDALNIMLVGDRHRLLQILANLVGNA
                     LKFTAEGTITLRSAIEREIGNALRIRFEVSDTGVGIPGNKQDMIFEAFTQADSSTTRR
                     YGGTGLGLSIARQLCHMMDGDIGLESVVGVGSTFWFTVLMEHKLDATLPATPPATTLA
                     VTTPPVTAPDTRSEPSAFVSPASLEFRAALERAGRHTVSILLVEDNAANMRVTQALLE
                     TLGCQVTPARNGLEAVGLYRGNAFDLVLMDCQMPEMDGYEATRAIRQIEGFQDRRTPI
                     VALTAHAMEGSREASLESGMDDQITKPLTMAILTSKLLEWLAPAETS"
     gene            1599..>3412
                     /locus_tag="VHX39_21855"
     CDS             1599..>3412
                     /locus_tag="VHX39_21855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3993824.1"
                     /translation="MTGSDAPRLGFGFDFADLAAREGLIRLDRRFLQDLAGQDAPLHQ
                     RLLAARAAPEAMTGRDESDLVVALGPHLDAFVAALFGIEAETGALMQETLALDPIHAC
                     KRLFVQRQAVKKYADPSGFDGPALRTALEARIGQPLTERTFATSVTTWENNPEALDEA
                     LRYAAWATLTPAGQAHHRGGTLFRIPHRVDPQHLVPVETIDRDGVTMLRLPEHDWRHR
                     EGFALTDHGMNTQQALDQVNYCIWCHTQGKDSCSTGLKDRKTGAFQKSVFGVTLAGCP
                     LDEKISEMHTLRAAGHVLGAFATIAIDNPMMAATGHRICNDCMKACIYQKQDAVDIPQ
                     AETSILKDVLALPWGFEIYALLTRWNPLDIRRPLPRSDSSRKILIVGLGPAGFTLAHH
                     LMNDGHTIVAVDGLKIEPLTFDPTQPVRDIETIYENLDDRVMAGFGGVAEYGITVRWN
                     KNYLKLVRLLLERRVHQFAHFGGIRFGGDATLSMDDAWAMGFDHIALCMGAGKPTVLD
                     IPNGLARGVRQASDFLMALQLTGAAKQSSIANLQLRLPVVVIGGGLTAIDTATESLAY
                     YVRQVEKFALRYRVLTADKGETAVRARWTPEEAETADE"
BASE COUNT          627 a         1210 c         1012 g          563 t
ORIGIN      
        1 gaccgtgatc gccctggcgg cgttcggtgg cgcggcaatc atggcttggc tgctcgcgct
       61 ctacctggcc cgtccggtgc gcagcgtcgc caccaccgcc gaggccgtcc tggaaggcaa
      121 cgacgaagtc tccgtgccgt cattccacgg cctggtgcca tatgaaatcc gccgcctcgg
      181 cgcggcattc aataccatgc tggacgacca gcgccggcgc gcggccgaaa cgcggcaggc
      241 cctgcttcag gcggaaactt ccaacaccgc caaaagccag ttcctcgcca acatgagcca
      301 tgaaatccgc acccccatga acggcgtggt cggcatgatc gagctgatga agctcaccga
      361 gctgtccccc gcacagcggc gctatgtgga aaccgcgaca caatccagcc aatcgctgct
      421 gcggctgatc gacgacatcc tggacctttc gcgcatcgag gtcggccggc tggaactgga
      481 gcatgcgccg ttccatctgc cgtcactcat ccacgatgtc cggatgctgt tcgccgatca
      541 ggcccggacc aaggggctga cgctgatgac cacgctcccg gatgcgctga acatcatgct
      601 ggtcggcgac cggcaccgtc tgctgcaaat cctggcaaat ctggtcggca acgctctgaa
      661 attcaccgcc gagggcacca tcacgttgcg cagcgcgatc gagcgcgaaa tcggcaacgc
      721 cctgcgcatc cgcttcgagg tgtccgatac cggggtcggc attcccggca acaagcagga
      781 catgatcttc gaagccttca cccaggcgga cagttccacg acccgccgct atggcggcac
      841 cggtctgggc ctgtcgatcg cccgccagct ttgccatatg atggacggcg acatcggcct
      901 ggaaagcgtc gtcggggttg gttcgacttt ctggttcacc gtgctgatgg agcacaagct
      961 cgacgccacc ctgcccgcca cgccccccgc caccacgctc gctgtcacca cgcctcccgt
     1021 caccgcgccg gacacccggt ccgaaccgtc cgcgttcgta tccccagcca gcctcgaatt
     1081 ccgcgcggcg ctggaacggg ccggccggca cacggtgtcg atcctgctgg tggaggacaa
     1141 cgcggccaac atgcgggtga cccaggcgct gctggaaacg ctgggctgcc aggtcacgcc
     1201 ggcccgcaac gggctggagg ccgtcggcct ctaccgcggc aacgctttcg acctggtgct
     1261 gatggattgc cagatgccgg aaatggacgg ctacgaagcc acaagagcta tccgccagat
     1321 cgagggattc caggatcgcc gcaccccgat cgtcgcactg acggcgcatg ccatggaagg
     1381 cagccgcgag gcgagcctgg aaagcggcat ggacgatcag atcaccaagc cgctgaccat
     1441 ggcgatcctc accagcaaac tgctcgagtg gctcgccccg gccgagacat cataagctga
     1501 atattgccct cgacttccct caacccagcc cccaggacat gaaggttgcc tgactttgcc
     1561 gcctgtggca tccgcagcgc ttcattgaaa gtggtcctgt gactggttct gacgctccgc
     1621 gacttgggtt tgggttcgat ttcgccgatc tggcagcccg cgaggggctg attcgcctgg
     1681 accggcggtt cctgcaggac ctcgccggac aggacgcccc cctgcatcag cgcctgctgg
     1741 ccgctcgggc ggcccccgag gccatgaccg gtcgcgacga gtccgatctg gtcgtagccc
     1801 tcggccccca tctcgacgcc ttcgtcgccg ccttgttcgg catcgaggcg gaaaccggcg
     1861 ccctgatgca ggaaaccctg gcactcgacc cgatccatgc ctgcaagagg ctgttcgttc
     1921 agcgccaggc ggtgaagaaa tacgccgatc cctccggctt tgacggaccc gccctgcgga
     1981 ccgccctgga agcccgtatc gggcagcccc tgaccgaacg gactttcgcc accagcgtca
     2041 ccacctggga aaacaacccc gaggcgctgg acgaagccct tcgctacgcc gcctgggcca
     2101 cactgacacc cgccggccag gcccatcatc gcggcggaac cctgttccgc atcccccacc
     2161 gcgtcgatcc ccagcacctg gtgcctgtgg aaaccatcga tcgcgacggc gtcaccatgc
     2221 tgcgcctgcc ggaacatgac tggcggcatc gcgaggggtt tgcgctgacc gatcacggca
     2281 tgaacaccca gcaggcgctg gaccaggtga actactgcat ctggtgccac acccagggga
     2341 aagattcctg cagtaccggc ctgaaggacc gcaagaccgg cgcgttccag aaatcggtgt
     2401 tcggggtgac gctggcaggc tgcccgctgg atgagaaaat cagcgaaatg cacaccctgc
     2461 gcgccgccgg ccacgtgctg ggtgcgttcg cgacgatcgc catcgacaat ccgatgatgg
     2521 cggcgaccgg tcatcgcatc tgcaacgact gcatgaaggc atgcatctat cagaagcagg
     2581 acgcggtcga cattccgcaa gcggaaacca gcatcctgaa ggacgttctg gcgctgccct
     2641 ggggcttcga gatctacgcc ctcctcaccc gctggaatcc gttggacatt cgccgccccc
     2701 tgccccgctc ggacagttct cgaaaaattc tgatcgtcgg ccttggcccg gccggcttca
     2761 ccctcgccca tcatctgatg aatgacggtc acaccatcgt cgccgtcgac ggcctgaaga
     2821 tcgagcccct taccttcgat ccgacgcagc ccgtccggga catcgaaaca atctacgaga
     2881 acctcgacga ccgcgtcatg gcaggcttcg gcggcgtcgc cgagtacggc atcaccgtcc
     2941 gctggaacaa gaactacctc aagcttgtcc gcctgctgct cgaacgccgc gtccaccagt
     3001 tcgcccattt cggcggcatc cgcttcggcg gtgacgccac gctgtcgatg gacgatgcct
     3061 gggcgatggg tttcgaccac atcgccctgt gcatgggcgc cggcaagccg actgtgctgg
     3121 acatccccaa tggcctggcc cgcggcgttc gccaggcctc cgacttcctg atggcgctgc
     3181 aactcaccgg cgcggcgaaa caatcctcca tcgccaacct gcagcttcgc ctgcccgtgg
     3241 tggtcatcgg cggcggcctg acggccatcg acaccgcaac cgagagcctc gcctattacg
     3301 tccggcaggt ggagaaattc gccctgcgct accgggtcct tacggcggac aagggcgaaa
     3361 ccgccgtgcg tgcccgctgg acgccggaag aagccgaaac cgccgacgaa tt
//
LOCUS       DATAVD010001147         1913 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2342712, whole genome shotgun sequence.
ACCESSION   DATAVD010001147 DATAVD010000000
VERSION     DATAVD010001147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1913
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2342712"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..678
                     /locus_tag="VHX39_21860"
     CDS             <1..678
                     /locus_tag="VHX39_21860"
                     /inference="COORDINATES: protein motif:HMM:NF042682.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6537 domain-containing protein"
                     /protein_id="HEX3993825.1"
                     /translation="AVQGVGPSVAETAAKYIARAMAYDDVIRVAALKTQPARSPRIQK
                     EMAGQVLAVTEFMHPRMEELLGLLSPGLGMAIERRPRLVALLDRVFCGPKRIRTDTIF
                     GFLMLYVVAGLRGRRRKTLRHAREFVRIEAWLNAVRMVAAEDPALAAELLANQRLIKG
                     YSETHARGLDKFARVMAAADRLRGRPDAADWVRRLRDAALKDEQGLALDAALRTVDTF
                     LNERTAA"
     gene            675..>1913
                     /locus_tag="VHX39_21865"
     CDS             675..>1913
                     /locus_tag="VHX39_21865"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX3993826.1"
                     /translation="MISRYRDDPLALSGLVREAEVHRDVYIDSEIFDLEMERLFANTW
                     VYVGHDSQVPNAGDYFGTTIGAQPVLMVRHEDGAVHVLYNRCPHKGTRITTETCGNTG
                     RFFRCPYHAWSFRTDGSPAALPLPGGYENTPFADSQAAQGLTPVRHVHNYRGFVFARM
                     AANGPDFATFFGESLSSIDNMVDRSPVGRLEVAGGVLRYMHNCNWKMLVENQTDTCHP
                     MVAHMSSAGTAIELWKRAGEQNPKPMAVEIYAPFMAPYEFYEKMGIRTWDNGHGHTGV
                     NHSIHSNYSAVPGYFDQMVAAYGEARAKAILDESRHNTIYFPNLMVKGPIQLLRLFKP
                     LGPDRTLVESWTFRLVDAPDFLLERTLVYNRLINAPTSVVGHDDLEMYERAQEGLHAN
                     GNPWVNLQRLYQAGETALAVD"
BASE COUNT          352 a          530 c          642 g          389 t
ORIGIN      
        1 gcggtgcaag gggttggccc ttccgtcgcc gaaactgcgg ccaagtacat tgctcgcgcc
       61 atggcctatg acgacgtgat ccgggtcgcg gcgctgaaga cgcagccggc tcggtcgcct
      121 cgtatccaga aggaaatggc gggacaggtc ctggccgtca ccgagtttat gcacccgcgg
      181 atggaggaac tgctggggct gctgtcgccc gggctgggga tggcgatcga gcgccggccc
      241 aggttggtcg cgctgctgga tcgggtgttc tgcggtccta aacgcattcg gaccgatacg
      301 atttttggtt tcctgatgct gtatgtggtc gcgggactgc gcggccggcg acggaaaacg
      361 ctgcggcatg cacgtgaatt cgttcggatc gaagcctggc tgaacgcggt tcgtatggtc
      421 gccgcggagg acccagccct ggcggctgag ttgctggcca atcagcgtct gatcaagggc
      481 tacagcgaaa cccatgcgcg cgggctggat aagttcgcgc gcgtgatggc ggcggcggac
      541 cgtctgcgcg gccgtcccga cgcggccgac tgggtgcgcc gcctgcgtga tgccgcgctg
      601 aaagacgaac agggattggc gctggacgcg gccctgcgca ccgtggacac gtttctgaac
      661 gaaaggacgg ccgcatgatc agccgttacc gagacgaccc tctggccctg agcggcctgg
      721 tccgcgaggc cgaggtgcat cgggatgtct atatcgattc tgaaatcttc gacctggaga
      781 tggagcggct gttcgccaac acgtgggtct atgtcgggca tgattcccag gttccgaatg
      841 ccggggatta tttcggcacg acaatcggcg cgcagccggt gctgatggtg cggcacgagg
      901 atggcgcagt gcatgtgctg tacaatcgct gtccgcacaa aggcactcgc atcaccaccg
      961 agacctgcgg taataccggg cggttctttc gttgcccgta tcatgcctgg agtttccgga
     1021 ccgacggcag ccccgccgcg ctgccgctgc ccggcggtta tgagaacacg ccgttcgccg
     1081 acagccaggc ggcgcagggt ctgacgccgg tgcgtcacgt gcacaattac cggggcttcg
     1141 tatttgccag gatggcggcg aatggtccgg atttcgcgac gtttttcgga gaatcgctgt
     1201 ccagcatcga taatatggtg gatcgttcgc ctgtcgggcg gctggaagtg gccggcggcg
     1261 tgctgcgcta tatgcacaac tgcaactgga agatgctggt cgagaaccag acagatacgt
     1321 gccatccgat ggtggcgcat atgtcctcgg ccggcacagc catcgaattg tggaaacgcg
     1381 cgggggagca aaatcccaag cccatggcgg tggaaatcta tgctccgttc atggcgccct
     1441 acgaattcta tgagaaaatg ggaattcgga cctgggataa cgggcacggt catactggcg
     1501 tgaaccattc gatccattcg aactattcgg ctgtgcccgg ctatttcgat cagatggttg
     1561 cggcttatgg cgaagcccga gcgaaggcga ttttggatga gagccggcac aatacgatct
     1621 attttcccaa tctgatggtc aaaggcccga tccagttgtt gcggctgttc aagccgctag
     1681 gtcctgaccg gacgctggtg gagagctgga cgttccggtt ggtggatgct ccggattttc
     1741 tgctggagcg gacattggtt tacaaccggc tgatcaatgc cccgacttcg gttgtgggcc
     1801 atgatgatct ggaaatgtat gagcgtgccc aggaaggcct gcatgccaac ggcaacccct
     1861 gggtgaatct gcagcgcctg tatcaggctg gcgaaacggc attggcagtc gat
//
LOCUS       DATAVD010001148         3634 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2532879, whole genome shotgun sequence.
ACCESSION   DATAVD010001148 DATAVD010000000
VERSION     DATAVD010001148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3634
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2532879"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..398)
                     /locus_tag="VHX39_21870"
     CDS             complement(<1..398)
                     /locus_tag="VHX39_21870"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3993827.1"
                     /translation="MSEPRGPLAGLRVLELADEKGQFCGKLLGDLGADVIKIEPPGGE
                     PCRHVGPFLDDIPHPERSLSFWHYNTSKRGITLNLETADGRALLQRLAATADIILETF
                     RPGFLASLGLDHATLCQSNPGLILCSLTPFG"
     gene            complement(395..1720)
                     /locus_tag="VHX39_21875"
     CDS             complement(395..1720)
                     /locus_tag="VHX39_21875"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3993828.1"
                     /translation="MPPPRALENIRVVDFSWVRAGPWATRWLGSLGAEIIKIEWPESE
                     RGRLPSTTTPQGVEVNLNTSGNFADTNVNKKSLSLNVRSPKGLEIVKRLIAISDIVIE
                     NFSSRVLRNWGLGYEQLCEIKPDIVYVSMSGYGHTGRNHSYTTFGPVAQSVAGLTVLS
                     GLPDKPPAGWGWSYMDDTGGMYGAMCALTGLYHRNMTGKGQHIDLSQMVASVPMNGPA
                     LLDLTVNGRDSHRPGFPPGNRAHWPGTPLLNNYRGPTVAPHNAYRTDPGGYNDWCVIV
                     CHSDEEWHRLVDVMGTPSWAAAEKFATLAGRLEHQDELDSRIETWTTTLDKYTLTERC
                     QAAQVRALPVQSAEDRVEHDPQLRQRQMYQPIDHPALGRHAVQNAPFKMSQTPAANYL
                     PAPLIGQHTREIVEGLLGMSHAELRSGFDDGTFWPTRRPRFPYMEDMLQ"
     gene            1859..2284
                     /locus_tag="VHX39_21880"
     CDS             1859..2284
                     /locus_tag="VHX39_21880"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HEX3993829.1"
                     /translation="MSDWSKVTRPIPVPNEWTKPFWDAAKRGVLELQRCQSCGHFQHP
                     PYATCVQCVSTELKFEPVRGAGAIYAYTIMYHTGDKRFASAVPYASIIVELDEAPGAL
                     LAGNLLGSEYTEAKVGRRVEVIFEKLNDDITLPQFRLAR"
     gene            2298..3482
                     /locus_tag="VHX39_21885"
     CDS             2298..3482
                     /locus_tag="VHX39_21885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993830.1"
                     /translation="MWDNRCKIAVSGVGYSKVSRSADIPLAAHALTAVKEAVADSGLR
                     MEDIDGLATYPELPATGHAEVDGISVVSVNCMMAMLKLPALTRHIQVGTTNIGGAVQQ
                     AVNALLAGVCKYAVVWRAMQNPSGTYQNLPGANAAGATQFTAPYGFGGPGQGMAVAYT
                     RWLEKNGQNREKMATLAVTQRKHTQHNPHAWFYGKTLTREDYFASRMVAYPFCLFDCD
                     IPVQGAVAIVLTTADRARDLKPTPAYLAGYGQRLHFEVAGRIGSLSSYMEGGSSSAKL
                     TWERSGFSPRDVDVAQIYDGFSASVIYGLESYGFCKEGEALDFIQDGRIELDGELPLN
                     TFGGSLGTGRIHGLWHIIEGALQASGRAGSRQVKDVNVSFVGASAPIVTGTTFIFVRE
                     PY"
BASE COUNT          688 a          964 c         1278 g          704 t
ORIGIN      
        1 ccgaacgggg tcagggagca caggatcaac ccgggattgg attggcaaag ggtcgcatgg
       61 tcgaggccta aggaagcgag gaaaccgggg cggaaggttt ccagaatgat gtcggccgtc
      121 gctgccagac gctgcaacaa ggcgcgaccg tcggcggttt ccaggttgag cgtgatgccg
      181 cgtttggagg tgttgtagtg ccagaacgac aggctacgtt ccgggtgcgg aatgtcgtcg
      241 aggaatggac cgacgtggcg gcatggctcg ccgccggggg gctcgatctt gatcacgtcg
      301 gcaccgagat cgcccaacag cttaccgcag aactgaccct tttcgtccgc cagttccaac
      361 acgcgcagac cagccaacgg tccccttggt tcgctcattg gagcatgtct tccatgtaag
      421 gaaagcgcgg ccgcctggtg ggccagaacg ttccgtcatc gaatccggag cggagttccg
      481 cgtggctcat gcccagaagc ccttcaacaa tttccctggt gtgttggccg atcaacggtg
      541 ccggaaggta atttgctgcc ggggtctgcg acattttgaa cggtgcgttt tgaaccgcgt
      601 gccggccaag cgccggatgg tcgatcggct ggtacatctg ccgctggcgc aattgcgggt
      661 cgtgttccac gcggtcttcg gcgctttgca ccggaagtgc gcggacctgc gcggcctggc
      721 aacgttcggt cagcgtgtat ttatccagcg ttgtggtcca ggtttcgatg cgcgagtcga
      781 gttcgtcctg gtgttcgagg cggcccgcca gcgttgcaaa tttctctgca gcggcccagg
      841 agggagtgcc cataacgtcg acaaggcgat gccattcctc gtcggagtgg cagacaatga
      901 cgcaccagtc gttgtagccg cccggatcgg tgcgatacgc attgtgtggc gcgaccgtcg
      961 gaccgcggta gttgttgagc agcggcgtgc caggccaatg cgctcggttg cccggcggga
     1021 atcctgggcg gtgcgaatcg cgtccgttta cggtgaggtc cagcaacgca ggaccgttca
     1081 tcggcacact ggcgaccatc tgcgacaggt cgatatgctg gcccttgccg gtcatattgc
     1141 ggtggtagag gccggtcagc gcacacatcg cgccatacat gccacccgtg tcgtccatat
     1201 acgaccatcc ccaaccggcc ggcggtttat ccggcaggcc agagagaact gtcagacctg
     1261 cgaccgattg ggccaccggg ccgaacgtcg tgtagctgtg attgcggccg gtgtggccgt
     1321 agccggacat cgatacatag acgatgtcgg gtttgatctc gcacagttgc tcgtagccaa
     1381 ggccccagtt gcgcagcacg cgagaactga aattttcaat cacgatgtcg gagatggcga
     1441 tcaggcgttt gacgatctcc agacctttgg gggagcggac gttcaggctc aggcttttct
     1501 tgttgacgtt ggtgtctgcg aagttgccgg aggtgttgag attgacttcg acgccttgag
     1561 gcgtggtggt actgggcagg cggcctcgtt cggattccgg ccattcgatt ttgatgatct
     1621 cggcaccgag ggagcccaac cagcgagtcg cccagggacc ggcgcggacc caggagaagt
     1681 ccaccacgcg gatgttttcg agggcacggg gtgggggcat gcgtttgggt ctcctgcggc
     1741 gggagagtgt ccaggctggg ggcgcggggt gtcaaatagc ggaccagccg gagagactat
     1801 ccctgaccgc ggcggcgctt tagactcgcg tccaaactgc ggatgcaagg cgacatcaat
     1861 gagcgactgg agcaaggtaa cccgcccaat tcccgtcccc aacgaatgga ccaaaccatt
     1921 ctgggacgcg gcgaaacgtg gcgttctgga actgcaacgc tgccaaagtt gcggccactt
     1981 ccagcatcca ccgtacgcga cctgtgtcca atgcgtcagc accgaactga agtttgagcc
     2041 agtgcgtgga gccggcgcga tctatgccta cacgatcatg tatcacaccg gcgacaaacg
     2101 cttcgcctcc gccgtgccgt acgccagcat catcgtggaa ctggacgagg cgccgggcgc
     2161 gctgctcgcc ggcaacctgt tggggtcgga gtataccgag gcgaaggttg gccgccgtgt
     2221 cgaggtcatc ttcgagaaac tgaacgacga catcacgctg ccgcagttcc ggctcgcgcg
     2281 ttaagaggag agacggcatg tgggacaacc gatgcaaaat cgctgtgagc ggcgtgggat
     2341 attcgaaagt gtcgcgcagc gcggacattc ctctggcagc gcacgcgctg accgcggtga
     2401 aagaagcggt cgctgattca gggctgcgga tggaggatat cgacgggctg gcgacctatc
     2461 ccgagttgcc ggcgacgggc catgcggagg tcgacggaat ctcggtcgtt tcggtcaatt
     2521 gcatgatggc gatgttgaag ttgccggcac tgaccaggca cattcaggtg gggacgacga
     2581 acattggcgg ggcggtgcag caggcggtga acgctctgct ggcgggggtg tgcaaatatg
     2641 ccgtggtgtg gcgggcgatg cagaacccga gcgggacgta tcagaatttg ccgggtgcca
     2701 atgctgccgg ggcgacgcag ttcaccgcgc cgtacgggtt cggcgggccg ggccagggga
     2761 tggcggtggc gtatacgcgg tggctggaga agaacggaca aaaccgcgag aagatggcaa
     2821 cgctggcggt gacgcagcgc aagcatacgc agcacaatcc gcatgcgtgg ttttacggga
     2881 agacgttgac gcgggaggat tacttcgcct cgcggatggt tgcgtatccg ttttgtctgt
     2941 tcgattgcga tattccggtg caaggcgcgg tggcgatcgt gctgacgacg gcggaccggg
     3001 caagggatct gaagccgaca ccggcgtatc tggcgggcta tggccagcgg ctgcacttcg
     3061 aggtggcggg ccggatcgga agtttgtcga gttatatgga gggaggcagc agttcggcga
     3121 agctgacgtg ggagcggtca gggttcagcc ctcgggatgt tgatgtggcg cagatttatg
     3181 acgggttctc ggcgtcggtg atttacgggt tggaatcgta cgggttttgc aaggagggcg
     3241 aggcgctgga tttcatccag gatggccgga tcgaactgga cggggagctg ccgttgaaca
     3301 cgtttggcgg ttcgctgggt accgggcgga tccacgggct gtggcacatc atcgagggcg
     3361 cgttgcaggc gtcgggacgg gctgggtcgc ggcaggtgaa ggatgtgaat gtgtcgtttg
     3421 ttggggcgag cgcaccgatt gttacgggca cgacgtttat atttgtaagg gagccgtatt
     3481 aaggagaaaa cagcagggca gcgggaggca agcttggccc cgggtaggaa gcgatccatc
     3541 gagccctcta ctttgagcat ccaagcgaat gccgaggtag gcgtatcggc gaagtacgag
     3601 gtgaggagga tcgttaccaa acatatcccc gagg
//
LOCUS       DATAVD010001149         2955 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3272981, whole genome shotgun sequence.
ACCESSION   DATAVD010001149 DATAVD010000000
VERSION     DATAVD010001149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2955
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3272981"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..612)
                     /locus_tag="VHX39_21890"
     CDS             complement(<1..612)
                     /locus_tag="VHX39_21890"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3993831.1"
                     /translation="MDYLSRIAVVEDDPEISRMMTAYMTDHGFEVTAARSGRDLDRVM
                     SSGNKIDCVILDVGLPGEDGLSICRRLRGKSTVPIIMVTGRGTDTDRIVGLELGADDY
                     LPKPFNPRELLARVRAVMRRSVAQEPAPETPRILAFEGWRLDMSRRQLFGPDGAPRSL
                     TSGEFNILSIFCQHPRKVLSRDDLLDLLHGRAAAVFDRSIDVQI"
     gene            893..2065
                     /locus_tag="VHX39_21895"
     CDS             893..2065
                     /locus_tag="VHX39_21895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase domain-containing protein"
                     /protein_id="HEX3993832.1"
                     /translation="MSLRGAAYIAGAWEHPTRKAPDKSIALLHAECAKGALADAGLTK
                     DDVDGYFCAGDAPGGLGPLSMVDYMNLKCRHVDSTDVGGSSYQVAVGHAMEAIASGRC
                     NVALITLSGRPRSEGQATGTAPRPGNPAAPEMQFEFPYGPATANLYGMCAARHMYQYG
                     TTSEQLAWIKVAASHHAQHNPNAMLRDVVTVEDVVNSPMVATPLHRLDCCVISDGGGA
                     LILTNPEIAKSLKRPLVKVIGVGESPKHQAGGEIDLTYSAARWSGPPAWEMAGIKPSD
                     IKYASIYDSFTITVLMQLEDLGFCEKGQGGKFVSDGNLISGVGKLPFNTDGGGLCSNH
                     PANRGGITKIIEAVRQLRGEAHPAVQVANCDLAIAHGTGGALGTRHCGSTVILERE"
     gene            2071..2472
                     /locus_tag="VHX39_21900"
     CDS             2071..2472
                     /locus_tag="VHX39_21900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HEX3993833.1"
                     /translation="MAYVARKIPFVGTPDTNPETRPFFDGAADGKLMVRRCKSCKKAH
                     HYPRELCPFCFGDCEWEQASGKAKIYTISIMERANPPYAIGYVTLAEGPSVLTNFVDC
                     DFKALKIGQDVKVTFIKTEGEGPTLPFFTPA"
     gene            2623..>2955
                     /locus_tag="VHX39_21905"
     CDS             2623..>2955
                     /locus_tag="VHX39_21905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3993834.1"
                     /translation="MSDVAHRFHSPTKTTDELGKINMILTRRGAMGTILGAAGALATP
                     RYGFAQTPTIKIGVMNDQSGPYRDDGGPTGVVCAKQAPVDYGISGKGWNVEIISADHQ
                     NKPDIGVSI"
BASE COUNT          594 a          955 c          909 g          497 t
ORIGIN      
        1 gatctgcacg tcgatgctgc gatcgaacac cgccgccgcg cgtccatgca gcagatccag
       61 cagatcgtcc cgagacagca ccttgcgcgg atgctggcag aagatcgaaa ggatattgaa
      121 ttccccgctg gtcagcgagc gcggcgcccc gtcagggccg aacaactgcc ggcgcgacat
      181 atccaggcgc caaccttcga acgccaggat ccgaggcgtc tcgggcgccg gttcctgtgc
      241 gacactgcgg cgcatgacgg ctcggacacg cgccagaagt tcccgcgggt tgaatggctt
      301 gggcaggtaa tcgtccgccc caagctccag cccgacgata cgatcggtgt ctgtcccgcg
      361 cccggtcacc atgatgatcg gaacagtgga ctttccgcgc aggcggcggc agatgctcag
      421 gccgtcttcg cctggcaggc cgacgtccag gatcacgcag tcgatcttgt tgccggacga
      481 catgacccgg tccaggtcac gcccgctgcg cgcggccgtc acctcgaacc cgtggtcggt
      541 catatacgcc gtcatcatcc ggctgatctc aggatcgtcc tcgacgacgg ctatgcgaga
      601 taggtaatcc attggcaccc ttcctgtgcg attctggcac tgtgcgacga ctgtaaacaa
      661 gtgcaacctt tggttggaaa caaattgaca cgttcaaact ttcgggtgct ggcaaatcgg
      721 atgaacacgg ccgtccgctt acgcaggcag cccagcattg ccgccgccgg ggtagccgta
      781 cggatactga tcagtataat cccctctgcc tgaccgaacc gccgtctggc ggcggttaca
      841 ttggcttgga ccggatcgtc gtagaacggc gatcccatgg ggggagcgaa gcatgagttt
      901 acgaggtgca gcctatatcg cgggggcgtg ggaacatccc acccgcaagg cgccggacaa
      961 gtccatcgcc ctgctgcatg ccgagtgcgc caagggtgcg ctggcggatg cgggcctgac
     1021 caaggacgac gtggacggct atttctgcgc cggcgacgcg ccaggcggcc tcggcccgct
     1081 gtccatggtc gattacatga acctgaaatg ccgtcacgtg gacagcaccg atgtcggcgg
     1141 ttcgtcatat caggtcgccg tcggacacgc gatggaagcc atcgcctccg gccgttgcaa
     1201 tgtggcgctg atcaccctgt cgggccgtcc gcgcagcgaa ggccaagcca ccggcaccgc
     1261 gccgcgcccc ggcaacccgg ccgcaccgga aatgcagttc gagttcccgt atggccccgc
     1321 cacggcgaac ctgtacggca tgtgcgccgc gaggcacatg taccagtacg gcaccaccag
     1381 cgaacaactc gcctggatca aggtcgccgc gtcgcatcac gcgcagcaca acccgaacgc
     1441 catgctgcgc gatgtggtga cggtggagga cgtggtgaac tcgccaatgg tcgccacccc
     1501 gctgcaccgg ctggactgct gcgtcatcag cgacggcggc ggcgcgctga tcctgaccaa
     1561 tccggagatc gccaaaagcc tgaagcggcc gctggtgaaa gtcatcggcg tcggtgagtc
     1621 tccgaaacat caggccggcg gcgagatcga cctgacctac tccgcggccc gctggtccgg
     1681 cccgccggcg tgggaaatgg cgggcatcaa gccctccgac atcaaatacg ccagtatcta
     1741 cgacagcttc accatcacgg tgctgatgca gttggaagac ctgggcttct gtgagaaggg
     1801 ccagggcgga aaattcgtgt ccgacggcaa cctgatctcc ggtgtcggca aattgccgtt
     1861 caataccgat ggtggcggat tgtgctccaa ccatccggcc aaccgcggtg ggatcaccaa
     1921 gatcatcgag gcagtccggc aactgcgcgg tgaggcgcat cccgcggtgc aggtggcgaa
     1981 ctgcgacctg gcgatcgccc atggcaccgg cggtgcgctc gggacccgcc attgtggcag
     2041 caccgtgatc ctggaacggg agtaatcgac atggcttacg tggcaagaaa aatcccgttc
     2101 gtcggcacgc ccgacacgaa cccggaaacc aggccgttct tcgacggcgc ggccgacggc
     2161 aagctgatgg tccgccgctg caaaagctgc aaaaaggcgc atcactatcc gcgcgagctg
     2221 tgcccgttct gcttcggcga ctgtgagtgg gaacaggcgt cgggcaaggc gaagatctac
     2281 acgatcagca tcatggaacg ggctaacccc ccgtatgcca tcggctacgt cacgctggcc
     2341 gaagggccgt ccgtgctgac gaacttcgtc gattgcgact tcaaggccct gaagatcggc
     2401 caggacgtga aggtgacatt catcaagacc gagggtgagg gaccaactct gccgttcttc
     2461 acccccgcct gatcgtcgcg gctcgaccgc aaacggcgcc ggtcaggaac ggccggcgcc
     2521 gtcgaaccgc tgaaaagcgg tcaattattt gcctccatcc gatcccgatc gagaccttgt
     2581 cgattcgcca tcgacaagcc cggcaggccg tctatgacac cggtgagcga cgtcgcccac
     2641 cgcttccatt cgccaacaaa aacgactgat gaactaggaa agattaacat gatcctgaca
     2701 cgacgcggcg ccatgggcac gatcctcggc gccgccggtg cgctggccac gccacgatat
     2761 ggctttgcgc agacgccgac cattaagatt ggtgtgatga acgaccaatc cggaccctat
     2821 cgcgacgacg gcggccccac cggcgttgtt tgcgccaagc aggcaccggt tgattacggc
     2881 atctccggca agggctggaa cgtggaaatc atttccgccg accaccagaa caagccggat
     2941 atcggcgttt ccatt
//
LOCUS       DATAVD010001150         3103 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_296793, whole genome shotgun sequence.
ACCESSION   DATAVD010001150 DATAVD010000000
VERSION     DATAVD010001150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3103
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296793"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..1420
                     /gene="mnmE"
                     /locus_tag="VHX39_21910"
     CDS             137..1420
                     /gene="mnmE"
                     /locus_tag="VHX39_21910"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEX3993835.1"
                     /translation="MNADTVFAVASGAGRAAIAILRISGPDSAAALTALCGPLPTPRR
                     AVVRALRDADGELLDRAMVLWLPGPESYTGEDSAELDVHAGRAVIDAVADRLTALGLR
                     PAEPGEFTRRAFLNGKLDLVSAEAVHDLVAAETDAQRRQALRQLDGALGDLYRGWSDR
                     LRGALARQEALIDFPDEDLPPEVEADLLASVRSLRQEIAVHLDDRQRGEKLREGLCFA
                     ITGAPNVGKSSLINALAERDVAIVSATPGTTRDAIETRIVLAGVPVTLVDTAGLRDTT
                     DPIEAEGVRRARARAAAADLVLEVIEAGSPIVSEGGRLLVANKSDLCPERRPGVAAVS
                     ALTGAGLPALRARLAAEATALTQSSGPPPLTRARHRTALLAAARWLAEAEDAIEPELR
                     GEAMRLALRALGTITGQVGVEDILDSIFRQFCIGK"
     gene            1857..2687
                     /locus_tag="VHX39_21915"
     CDS             1857..2687
                     /locus_tag="VHX39_21915"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3993836.1"
                     /translation="MRTELISIPTETVPLDGALHWPEGPVTGAVLLFHGNTMNFYVGA
                     PRFLPPALTRMGYACLAFNRRGHDILSIRNSRAAEGAAFQLTRESIEDNRIAARWMAA
                     RGFSPPVIIGHSNGGMLAVPHVVTHPDTPAMILLSAHGGGKDGVLRSSQAGLMAAGRL
                     AEITAQAQQMVADGRGNELLLMPGWWYAISAESFLDRMTAMPDTLELAPQVRCPVLYL
                     RGDQENAETYPAEAFKARAGGPCEVQIIPNCDHFYNGQEQAVIDRVTAWLAKTLPAYA
                     "
     gene            complement(2678..>3103)
                     /locus_tag="VHX39_21920"
     CDS             complement(2678..>3103)
                     /locus_tag="VHX39_21920"
                     /inference="COORDINATES: protein motif:HMM:NF015078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993837.1"
                     /translation="SAVGWIAGGLLYRYVMWRLPMRHLLNLSLVFGAVTMLSYLGLVG
                     PVTAVVIYFFTGMAAMVANVATLSLAAAVCPPRAEGFTFAALMSVINLATPLSDTIGA
                     VLYEHVFANRLGPLAVVSAAFTAFVLVLVPLVTGRGDQA"
BASE COUNT          570 a          975 c         1008 g          550 t
ORIGIN      
        1 atggcttgtt cgaaccaacc ggcgacggtt tccacctgct tcagatcgct cctggactga
       61 ccgtcgacga ggtccgtgcg gcaaccgcaa cgccgctgac ggtggccgat ccgttgccgg
      121 tggtgcggct cgcggggtga atgctgacac ggtcttcgcc gtagcgtccg gcgcgggccg
      181 tgcagccatc gcaatcttgc ggatcagcgg accggacagc gctgcggcgc tgactgcatt
      241 gtgcggacct ctgccaacgc cgcggcgtgc tgtcgtgcgg gcgttgcgcg atgctgacgg
      301 cgaattgctc gatcgcgcca tggtgctttg gctgccaggc ccagagtcgt acaccggcga
      361 ggactccgcc gagctcgacg tgcatgccgg ccgggcggtg atcgatgccg tcgccgaccg
      421 gctgaccgcg ctaggattgc gaccggcaga accgggggaa ttcacccgcc gtgcctttct
      481 gaatggcaag ctggatctgg tgtccgccga ggcggtgcac gacctggttg ccgccgaaac
      541 ggacgcgcaa cggcgtcagg cgctgcggca actggatggc gctctgggcg atctgtatcg
      601 tggttggtcg gaccgcttgc gcggtgccct ggcgcggcag gaagcgctga tcgactttcc
      661 cgatgaagac ctgccgcccg aagtcgaggc cgacctgttg gcttccgtgc gatcgttgcg
      721 gcaggagatc gccgtccatc tcgacgatcg tcaacgcggc gagaaattgc gcgaaggtct
      781 gtgtttcgcc atcaccggtg cgcccaatgt cggaaagtct tcgctgatca atgcgctggc
      841 tgaacgcgac gtggcgatcg tgtcggccac ccccggcacg acccgtgacg cgatcgaaac
      901 gcgcatcgtt ctggcgggtg tgcccgtcac gctggtggac acggcgggac tgcgcgacac
      961 caccgatccg atcgaagccg agggcgtgcg gcgggcccgt gcgcgcgcgg ccgcggccga
     1021 tcttgtgctg gaggtgatcg aggccggctc gccgattgtt tccgaaggcg gcaggttgct
     1081 cgttgccaac aaatccgatc tatgtccgga acgacggcct ggtgttgcgg cggtcagtgc
     1141 gctgaccggt gccggtctgc ccgcgctgcg cgcccggctg gccgccgagg caaccgcatt
     1201 gacgcaatcg agcggcccgc cgccgttgac ccgcgcccgc catcggacgg cgctgcttgc
     1261 cgccgcacgc tggctcgcgg aggccgagga cgcgattgaa cccgaattgc gtggtgaggc
     1321 aatgcgcctt gcgttgcgcg cactcgggac gatcactggt caggtgggag tggaagacat
     1381 cctggactcg atttttcgtc agttctgtat tggcaaatga caggccgcta ttgctccgcc
     1441 accacgtcgg attttgggtg tgcagaagat gtgacgtaca gagaataact tcaactcggt
     1501 tcctccacct gcgcgggccg cgccgtcaaa atgtgccacc aatgtcagct gcaacgccgt
     1561 aatcagcgcg caagattttg ttcatcgttc aaagaaggtc tgagtccgtt cgtctaccag
     1621 aaaggcaaga taactgaaca aagacaagtg cagatggtgt atcacgaaag ccgacgccac
     1681 acgcccgaag cgtttgccat cttatgccga tctgagcagg accccgacgc agtccggttc
     1741 ggccccgaac gtgaatcacg tggtgtctca acatgccaaa tatggtccca gattggcctc
     1801 cagtggtgtt ccggtccaca accggccagc ctgcaatcac actgagggtg acggccatgc
     1861 gaaccgagtt gatttcgatc ccgaccgaga ccgtgccgct cgatggtgcg ctgcattggc
     1921 ctgagggtcc ggtcaccggc gcggtgctgc tgttccacgg caacaccatg aacttctatg
     1981 tcggtgcgcc cagatttctg cccccggcgt tgacccggat gggctacgcg tgtctcgcgt
     2041 tcaatcggcg tggccacgat atcctcagca ttcgcaacag ccgtgccgcc gagggcgcag
     2101 cgtttcaact cacccgcgaa agcatcgagg acaaccggat tgcagcgcgc tggatggcgg
     2161 cacgcgggtt ctctccgcca gtgattatcg gccacagcaa cggcgggatg ctggccgtgc
     2221 cgcatgtcgt gacccatccg gatacgcccg cgatgatcct gctgtcggcg catggcggcg
     2281 gcaaggatgg cgtgttgcgg tcgagtcagg ctggtttgat ggccgccggc cggctggctg
     2341 aaatcacagc tcaggcgcag cagatggttg ctgacgggcg cggcaacgaa ctgctgctga
     2401 tgccgggctg gtggtatgcc atctcggcgg aaagtttcct ggacagaatg accgcaatgc
     2461 ccgacacgct tgaactggcg ccacaggtgc gctgtccggt gctgtatctg cgcggcgatc
     2521 aggaaaatgc ggaaacctat ccggcggagg cgttcaaggc ccgcgccggc gggccctgcg
     2581 aggtgcagat cattcccaat tgcgatcact tttacaacgg ccaggagcag gcggtgatcg
     2641 atcgggtaac cgcctggctg gcaaagacgt tgccagccta tgcctgatca ccgcggccgg
     2701 tcaccaacgg caccagcacc aacacgaacg cggtgaacgc tgcggagacc acagccagcg
     2761 gtcccagccg attggcgaaa acatgctcat acaggactgc gccgatggtg tcggacaacg
     2821 gcgtcgcgag gttgatcacc gacatcagcg cggcaaacgt aaacccctcg gcgcgcggcg
     2881 ggcaaaccgc ggcggcaagg ctcaatgtcg cgacattcgc caccatcgct gccatgccgg
     2941 tgaagaagta gatcaccact gcggtaaccg ggcccaccag tccaaggtag gacagcatgg
     3001 tgaccgcacc gaacaccagc gacaggttca gcaaatgtcg catcggcagc cgccacatca
     3061 catagcgata cagtaaccct ccggcgatcc agcccacagc act
//
LOCUS       DATAVD010001151         3714 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2717102, whole genome shotgun sequence.
ACCESSION   DATAVD010001151 DATAVD010000000
VERSION     DATAVD010001151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3714
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2717102"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..561)
                     /locus_tag="VHX39_21925"
     CDS             complement(<1..561)
                     /locus_tag="VHX39_21925"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3993838.1"
                     /translation="MREIFPRESAADPEPFTGERLTASVHGQIELEHYHRYLFSRGFC
                     RDRDVLDVASGEGYGAAHLAQVAQSVVGVEYAGSTVRNAARNFRRANLCFIQADARSL
                     PVGNASVDVVTSFETIEHFDRQEDFVAEVRRVLRPDGCFIVSTPDRDIYTPLGAALNP
                     FHVREFDRTEFLDLLHRHFRYVSLIRQ"
     gene            complement(577..1404)
                     /locus_tag="VHX39_21930"
     CDS             complement(577..1404)
                     /locus_tag="VHX39_21930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HEX3993839.1"
                     /translation="MLDPRDALDAIGALPDTEIDIGDAALQFARIDAPDADWQAARTH
                     LSELARAASGLADTIDDSDLAARAVGLSGVLGGRFGYRGDDQTYDDLVNANLIRVTER
                     RRGLPVALGVLWLHAAHAAGWVAHGVDFPAHFLVAMPGAGGQSVLDVFHGGTPLTSKD
                     LRALLKKVEGDSAELRPGLLRPMSSRRVLLRLQNNILTRRLMANDPDGALVCAEDMLR
                     IAPDHASLWQQTALLNQKLDRIAAALRCFDRFLALVPDGEAAREARAIAGTLRGRLN"
     gene            complement(1420..3252)
                     /gene="thiC"
                     /locus_tag="VHX39_21935"
     CDS             complement(1420..3252)
                     /gene="thiC"
                     /locus_tag="VHX39_21935"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEX3993840.1"
                     /translation="MTVQTRSAARPSEVTTGPIVGSHKIYLSPPGRPDIRVPFREIPL
                     DPTAREEPYRAYDCSGPYTDTGVTVDLEAGLPPVRAEWLAKRGFDRITPRAVKPEDNG
                     NIGNDKLVPECPADHPVYGGKPGQLVTQYEYARAGLITEEMIYVAHRENLGRTQALAE
                     AEARIADGESFGAEIPAFITPEFVRSEIARGRAIIPANINHPELEPVIIGRNFLVKIN
                     ANIGNSAVTSGVAEEVEKLVWSTRWGADTVMDLSTGRNIHNIRGWIMRNAAVPIGTVP
                     IYQALEKVDGDPAKLDWEVFKDTLIEQAEQGVDYFTIHAGVRLQYVPLTAKRVTGIVS
                     RGGSIMARWCLSHHKESFLYERFDEICDIMQKYDVSFSLGDGLRPGSNADANDAAQFG
                     ELETLGELTRIAWNKGCQVMIEGPGHVPMHKIKVNMDKQLRECGEAPFYTLGPLTTDI
                     APGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPDRDDVKTGVITYRIAAHAADLA
                     KGHPAARLRDDAVSRARFEFRWEDQFNLGLDPDTARKFHDETLPKEAHKVAHFCSMCG
                     PKFCSMKITQDLRVEAERMSGMDAKREEFVAKGSEIYLPEQAAE"
     regulatory      complement(3312..3419)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
BASE COUNT          657 a         1172 c         1196 g          689 t
ORIGIN      
        1 ctgccggatc agcgaaacat agcggaaatg tcggtgcagg agatcgagga actccgtccg
       61 gtcgaattcg cgcacatgga acggattgag cgccgctcca aggggcgtgt agatgtcccg
      121 gtcaggcgta ctgacgatga aacatccgtc aggccgcaac acccggcgca cctcggcaac
      181 aaaatcctcc tggcgatcga aatgctcgat ggtctcgaat gaggtcacca cgtcgactga
      241 cgcattgcca accggaagag atcgcgcatc ggcctgaatg aagcaaagat tggcgcgccg
      301 gaaattacgc gcggcgttgc gcacggtcga accggcgtat tccacgccca ccacactctg
      361 ggccacctgt gccagatgcg cagcaccgta gccttccccg ctggcgacat ccagcacgtc
      421 gcggtcgcgg caaaatccgc gcgagaacag gtaacgatgg taatgctcga gttcgatctg
      481 gccatgtacc gacgcggtca gccgttcgcc ggtgaacggc tccgggtcgg cggcagactc
      541 gcgcggaaaa atctctcgca tttcggcgaa taggccttag ttcagccgcc ctcgcaaggt
      601 tccggcaatg gcacgagctt cgcgagccgc ctcaccgtcc ggcaccagcg cgagaaaccg
      661 gtcgaaacag cgcaacgccg cggcgatccg gtcgagtttc tggttcaaca gcgccgtctg
      721 ttgccacagg ctggcgtgat ccggcgcgat ccgcagcatg tcttcggcac agaccaaagc
      781 gccgtccggg tcgttggcca tcaaccgccg cgtcaggatg ttgttctgca gccgcagcag
      841 cacgcgccgt gaactcattg gccgcaacag gccgggccgc aactcggcgc tgtcgccttc
      901 gacctttttc agtagcgcac gcagatcctt gctggtgagc ggcgtgccgc catggaacac
      961 atccagcacc gactgcccgc ccgcccccgg catcgccacc aggaaatgcg ccgggaaatc
     1021 gaccccatgg gcaacccagc ccgcggcgtg ggcagcgtgc agccaaagca cgcccagtgc
     1081 gacggggaga ccgcggcggc gctcggtgac gcggatgaga ttggcgttga cgaggtcatc
     1141 gtaggtctgg tcgtcaccgc gatagccgaa ccggccgccc aatacgccgg atagaccgac
     1201 cgcgcgggcg gcaaggtcgg aatcgtcgat ggtgtcggcg aggccgctcg ccgcgcgggc
     1261 cagttcactc agatgcgtcc gcgccgcctg ccagtcagcg tccggtgcgt cgatgcgagc
     1321 gaactgcaag gcagcgtcgc caatgtcgat ctccgtgtcc ggcagagccc cgatggcatc
     1381 gagagcgtct ctgggatcga gcattggcgt aagcccgggt tactcggccg cttgttcggg
     1441 caggtagatt tcgctgcctt tggcaacgaa ttcctcccgc ttggcgtcca tgccggacat
     1501 ccgttccgcc tcgacccgca ggtcctgggt gattttcatc gaacagaact tcggaccgca
     1561 catggaacag aaatgcgcca ccttgtgcgc ttccttgggc agcgtctcgt catggaactt
     1621 tcgagctgtg tcggggtcga ggccgagatt gaactgatcc tcccaacgga actcgaagcg
     1681 cgcccggctg accgcgtcat cgcgcaaccg cgccgcggga tggcccttgg cgaggtcggc
     1741 ggcgtgcgcg gcaatacgat aagtgatcac gccggttttc acgtcgtcgc ggtcgggcag
     1801 gccaagatgt tccttcggcg taacgtagca cagcatcgcc gtgccgaacc agccgatcat
     1861 cgccgcgccg atcgccgaag taatgtgatc gtagccaggt gcgatgtcgg tggtcagcgg
     1921 gccaagcgtg tagaacggcg cctcaccgca ttcgcgcaac tgcttgtcca tgttgacctt
     1981 gatcttgtgc atgggcacat ggcctgggcc ttcgatcatg acctgacagc ccttgttcca
     2041 cgcgatcctg gtcagttcgc ccagcgtttc cagctcgcca aactgggctg cgtcattggc
     2101 atcggcgttg gagccaggcc gcagaccgtc gccgagcgag aacgaaacat cgtatttctg
     2161 catgatgtcg cagatctcgt cgaaccgctc ataaaggaag ctttccttgt gatgcgacag
     2221 gcaccagcgc gccatgatcg agccgccgcg cgacacgatc ccggtcacgc gtttcgccgt
     2281 cagcggcacg tattgcagcc gcacgccggc atggatggtg aagtagtcga cgccctgttc
     2341 ggcctgctcg atcagcgtgt ccttgaacac ttcccagtcg agtttggccg ggtcgccatc
     2401 gaccttttcc agcgcctggt agatcggcac ggtgccgatc ggcactgcgg cattgcgcat
     2461 gatccagccg cggatgttgt ggatgttccg cccggtggac aggtccatca cagtgtcggc
     2521 gccccagcgg gtcgaccaca ccagtttctc gacctcttcg gccacgccgg aggtgactgc
     2581 ggaattgccg atattggcgt tgatcttgac caggaagtta cggccgatga tcaccggctc
     2641 cagttccggg tggttgatgt tggccgggat gatggcgcga ccgcgggcga tctcggagcg
     2701 gacgaattcc ggcgtgatga aggctggaat ttcggcaccg aaactttcgc cgtcggcaat
     2761 gcgtgcttca gcttcggcca gtgcctgggt gcggccgagg ttttcgcggt gcgcgacgta
     2821 gatcatttcc tcggtgatga ggccggcgcg ggcatattca tattgcgtca cgagttgacc
     2881 aggcttgccg ccatagaccg gatggtcggc cgggcattcg gggaccagct tgtcgttgcc
     2941 gatgttgccg ttgtcttccg gcttcactgc acggggcgtg atgcggtcga agccgcgttt
     3001 ggcgagccac tcggcgcgca ccggcggcag gccggcttcc aggtcaaccg tcacgccggt
     3061 gtcggtgtag ggaccggagc agtcataggc acgatacggt tcctcgcgcg ctgtcggatc
     3121 gagcgggatc tcccgaaatg gcacacgaat gtccggccgg cccggcggcg aaaggtaaat
     3181 cttgtgcgag ccgacaattg ggccggtcgt tacttcactg gggcgggcgg cagacctggt
     3241 ttggaccgtc atgggcgtct cctaatcgtc acattcgggt gccggatgga aggagagtcc
     3301 ctggtgctgg ctcccgtccc tccgccggca tgacccggtt caggttcaag ggtttccgcg
     3361 ccgccggttg gttccggtct cgcggcctct cagccccatc ggcggggctc ccctcggtag
     3421 cccgagacgt tggcctggtt gggcgcgcgt gtcaaaccgg atagaggcaa ccgactgaag
     3481 cgaggaaagc gcaagggctc cgccctcgaa cccaccaggg gctttgcccc tggaccccgg
     3541 caaaggtcga ggaccttcgc aatctttccg ttggttgctc ctgggagagg gccgaccgtg
     3601 acctcgcaag gtccatgtcg gccctctccc aggagcaacc aaaatgaacg gttccaaggg
     3661 ccgctgccct tggtggaggt ccaggaggca gagcctcttg gtcagggtcc ggcg
//
LOCUS       DATAVD010001152         2007 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2903338, whole genome shotgun sequence.
ACCESSION   DATAVD010001152 DATAVD010000000
VERSION     DATAVD010001152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2903338"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..461
                     /locus_tag="VHX39_21940"
     CDS             <1..461
                     /locus_tag="VHX39_21940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003619205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="F420-dependent glucose-6-phosphate
                     dehydrogenase"
                     /protein_id="HEX3993841.1"
                     /translation="GRMTDGFICTSGKAWDLYTKTLLPNVEEGLKLSSKPKPNYDRMI
                     EMKVSFDTDHSRALNDTRHWAALALTPEEKMSVEDPVEMERLADALPIERAASRWIVS
                     NDPDEHIEKIKPYIEMGFRHLVFHAPGPDQVRFLKLYGEQVLPKLRQRFD"
     gene            546..1304
                     /gene="cofE"
                     /locus_tag="VHX39_21945"
     CDS             546..1304
                     /gene="cofE"
                     /locus_tag="VHX39_21945"
                     /EC_number="6.3.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003619206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043773 - coenzyme F420-0 gamma-glutamyl
                     ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="coenzyme F420-0:L-glutamate ligase"
                     /protein_id="HEX3993842.1"
                     /translation="MSARLEIFAIPGLPMVRAGDDLAALIADAVVTPLRDGDVVVVAQ
                     KIVSKAEGRTVDLATVTPTADAIALAAKVEKDPRIVQVVLSESVRVVRSRPNLMIMQH
                     RLGFVMANAGVDQSNVAPSDGVQRALLLPVDPDGSAEAIRAGLAGRFGIKLGCIISDS
                     FGRPWRRGTAGVAIGCAGLPSLIDLRGQPDLFGRILEVSIIGFADEIAAAASLLQGQA
                     AEGQPVIVVRGLTWTAPDASVADLVRPPEEDLFL"
     gene            1301..>2007
                     /locus_tag="VHX39_21950"
     CDS             1301..>2007
                     /locus_tag="VHX39_21950"
                     /inference="COORDINATES: protein motif:HMM:NF014042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-phospho-L-lactate transferase"
                     /protein_id="HEX3993843.1"
                     /translation="MIIALSGGVGGAKLALGLARIMPPEQLTVVVNTGDDFEHLGLSI
                     SPDIDTVTYTLAGVANRELGWGRQDETWSFMDTMEALGGETWFRLGDRDIALHVERTR
                     RLNAGEKLSAVTADFCHRLGIKSHVVPMSDDPVRTRLRTDEGWLDFQEYFVHRRCEPV
                     VHELLFQGAGAARAHPDFLAALTNPALQAIVICPSNPFISVEPILAIPGVRQAMIDSP
                     VPIIAVSPIIAGQAVKGP"
BASE COUNT          350 a          623 c          620 g          414 t
ORIGIN      
        1 ccggccgcat gaccgatggt ttcatttgca ccagcggcaa ggcgtgggat ctttacacca
       61 agactctgct gccgaatgtc gaggaaggtc tgaaactttc cagcaagcca aaacccaatt
      121 acgaccggat gatcgagatg aaggtctcct tcgacaccga ccattcccgc gctttgaacg
      181 acacaaggca ttgggccgcg ttggcgttga cgcctgagga aaaaatgtcg gtcgaggatc
      241 cggttgagat ggaacgcctc gccgacgcgc tgcccatcga acgcgccgcc agccgctgga
      301 tcgtgtcgaa cgatccggat gagcacatcg agaagatcaa gccgtacatc gaaatggggt
      361 tccggcatct ggtgtttcac gcccccggcc cggatcaggt gcggttcctg aaactctacg
      421 gcgagcaggt gttgccaaag ctgcgccagc gcttcgacta acgcagttgc cgttcatgtc
      481 gcgtttccgg ttccgtgcgc gccgatccat cggatttcca gacgcccggg gccgtttctg
      541 aagtcatgag cgcacgcctg gaaatcttcg cgatccccgg cctgccgatg gtgcgggccg
      601 gcgacgatct ggcggcgctg atcgctgacg ccgtggtcac cccgttgcgg gatggcgacg
      661 ttgtggtggt cgcgcaaaag atcgtttcca aagccgaagg ccgtaccgtc gaccttgcca
      721 cggtaacgcc gaccgctgac gcaatcgcat tggcggcgaa agtcgaaaaa gatccgcgca
      781 tcgttcaggt cgtgctgtcg gaatccgtgc gcgtcgtacg cagccgtccc aacctgatga
      841 tcatgcaaca ccggctcggc ttcgtcatgg cgaacgccgg cgtcgatcag tcgaatgtcg
      901 cgccttctga cggggtgcag cgcgcgttgc tgctgccggt cgatcccgat ggctcggcag
      961 aagcgatccg cgccggtttg gcaggccgtt tcggcatcaa actgggctgc atcatcagcg
     1021 acagcttcgg ccgcccgtgg cgtcgcggca cggccggtgt tgccattggc tgcgccggcc
     1081 tgccttcttt gattgacctg cgcggtcagc cggacctgtt cggccgcatt ttggaagtca
     1141 gcatcatcgg ttttgccgac gagatcgctg ccgccgcctc cttgctgcaa ggccaggccg
     1201 ccgaggggca acctgtcatt gtcgttcgcg gtctgacctg gaccgcaccg gacgcatcgg
     1261 ttgccgatct cgttcgccca ccggaagagg atttgttcct gtgatcatcg ccctctccgg
     1321 cggcgtcggc ggcgctaaac ttgcgttggg cctcgcaagg atcatgccgc ccgagcaact
     1381 gaccgtcgtc gtcaacaccg gcgacgattt cgagcacctc ggtctgtcga tttcgcccga
     1441 tatcgacacc gtaacctata ccctggccgg cgttgccaat cgcgaactcg gctgggggcg
     1501 gcaggatgaa acctggtctt tcatggatac catggaggct ttgggtggcg aaacctggtt
     1561 tcgtctgggc gatcgcgata tcgctttgca tgtggaacgt acccggcggt tgaacgccgg
     1621 cgaaaaattg tcggccgtga ctgcggattt ctgtcaccgt ctggggatca agtcgcacgt
     1681 cgtgccgatg agcgacgatc cggtgcgcac tcggttgcgc accgacgaag gctggctcga
     1741 tttccaggaa tatttcgtgc accgccgctg cgagccggtg gtgcacgaat tgttgtttca
     1801 aggtgccggt gcggcccgtg cgcatcccga cttcctggcc gcactgacca atcctgcctt
     1861 gcaggcgatc gtgatctgcc cgtccaatcc gttcatcagc gtcgagccga tcctggcaat
     1921 ccctggcgtc cgtcaggcaa tgatcgacag tccggttccg atcatcgcag tctcgccgat
     1981 cattgcgggg caggcggtca aaggtcc
//
LOCUS       DATAVD010001153         2603 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_296837, whole genome shotgun sequence.
ACCESSION   DATAVD010001153 DATAVD010000000
VERSION     DATAVD010001153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2603
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296837"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1900
                     /locus_tag="VHX39_21955"
     CDS             <1..1900
                     /locus_tag="VHX39_21955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3993844.1"
                     /translation="TAVFASESYDEAYAAWQHDPHSWWANAAEGITWTKRWDRVFDPS
                     LGAYGQWFAGGMLNTCYNCLDRHVEAGRGTQPALIWDSAMTGKVVTYSYAELRDRTAR
                     LAGALADLGVAKGDRVVIYMPMVPEAVIAMLACARLGAIHSVVFGGFAAAELATRIAD
                     AKPKVIVSASCGLEPGRVIQYKPLLDLAIEMSPHKPDGCLILQREQAIAALEPGRDHD
                     LLAAEAAAAPRDCVPVLATDPLYILYTSGTTGRPKGVVRDNGGHAVALWNSMQMIYGC
                     DVGDVYWAASDVGWVVGHSYIVYAPLLRGCTSIMYEGKPVGTPDAGAFWRVCAQHRVK
                     VLFTAPTAMRAIKQQDPDGKMLADHDLSKLEALYLAGERCDPPTAIWAADLLKMPVVD
                     HWWQTETGWPITSGFRQYGLFPFRPGSGGRPCPGYDLHALDDDGHLLGAGTTGNLSIR
                     LPLPPGCGPTLWQNDEGYRTSYLADFPGWYRTGDAGVVDEAGDVWVMGRTDDIINVAG
                     HRLSTGSMEEVLASHQDVAECAVIGAKDELKGQTPMGLVVLKSGVNRPHPEIEKELVA
                     LVRERIGPVASFRDARVVARLPKTRSGKILRASIRKIADGEAAPVPPTIEDPAALEEL
                     AAVLSGKP"
     gene            complement(1926..>2603)
                     /locus_tag="VHX39_21960"
     CDS             complement(1926..>2603)
                     /locus_tag="VHX39_21960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEX3993845.1"
                     /translation="GGIGGGLLGCATGFLASRLMRWADDLGLWLMISFTLVTGTYRIA
                     GIIGVSGPTAVVACGLILRAMAPREAARRLLIGEMTTFWSVAEDLLNAMLFMLIGFEV
                     LAINFAREVLLPVLSALPLALLSRLSAVMLPLLVFRIDTRRQWRGMVMLTWAGMHGGV
                     SIALALTLPFNEYRPILLVVCYAVVVLSMLVQALTMPMVIRWLYSRGSETRDGAVAVA
                     AKPVEPA"
BASE COUNT          504 a          817 c          849 g          433 t
ORIGIN      
        1 aacagcggtc ttcgcaagcg agtcctatga cgaggcctac gccgcctggc agcacgaccc
       61 gcattcctgg tgggccaacg ccgccgaggg cattacctgg acgaagcgct gggatcgggt
      121 gttcgacccc tcgctcggcg catacggcca atggttcgcc ggcgggatgc tcaacacctg
      181 ttacaattgt ctcgaccgtc acgtggaagc aggccgcggc acgcagccgg cgctgatctg
      241 ggacagcgca atgaccggca aggtcgtcac ctacagctac gccgaattgc gcgaccgcac
      301 tgccaggctc gccggcgcgc tcgccgatct tggcgtcgcc aaaggcgatc gggtggtgat
      361 ctatatgccg atggtgcccg aggccgtgat cgccatgttg gcctgcgctc ggttgggcgc
      421 catccactcg gtcgtgttcg gcggcttcgc tgccgcggaa ctggcaaccc gcattgccga
      481 tgcgaaaccg aaggtcatcg tgtcagcctc gtgcggcctg gaacccggcc gggtgatcca
      541 atacaaaccg ctgctggacc tcgcgatcga gatgtcgccg cacaagccgg acggctgcct
      601 gattttgcaa cgcgagcagg cgatcgctgc tctggaaccc ggccgagacc acgatttgct
      661 ggcggccgaa gcggcagccg cgccgcggga ctgtgtgccc gtgctggcca ccgacccgct
      721 gtatattctg tatacgtccg gaaccacggg acggcccaaa ggcgtcgtgc gagacaacgg
      781 cggccacgct gtcgcgctgt ggaactcgat gcagatgatc tacggctgcg atgtcggcga
      841 tgtgtactgg gctgcctcgg atgtcggctg ggtcgttggc cacagctaca tcgtttacgc
      901 gcctctgctg cgcggctgca ccagcatcat gtacgagggc aagcccgttg gcacgcccga
      961 cgccggcgca ttctggcggg tttgcgcgca acatcgcgtg aaagtcctgt tcactgcacc
     1021 gacggcaatg cgggcgatca agcagcagga ccctgacggg aaaatgctcg cagaccatga
     1081 tttgtcgaaa ctggaggcac tgtatctcgc tggtgagcgc tgcgatccgc cgaccgccat
     1141 ctgggctgcg gacctgctga aaatgccggt ggtcgatcac tggtggcaga ccgaaacggg
     1201 ttggccgatt acgtctggat ttcggcaata cgggttattc ccgttccggc ccggctcggg
     1261 gggacgtccg tgcccaggat acgatctgca tgcattggat gatgatgggc atttgttggg
     1321 ggctggcacg accggcaacc tgagtatccg cctgcctttg ccgcccggtt gcgggccgac
     1381 gctgtggcaa aatgacgagg gttatcgaac ctcctatctg gccgacttcc cgggttggta
     1441 tcgcaccggc gacgccggcg tggttgacga ggcgggcgac gtctgggtca tgggccgcac
     1501 ggacgacatc atcaatgtcg ccggccaccg gctgtccacc ggctcgatgg aggaagtgtt
     1561 ggcttcccac caggatgttg cggaatgcgc cgtgatcggg gcgaaggacg agttgaaagg
     1621 ccagacgccg atgggtctcg ttgtgctgaa atccggggtc aaccggccgc acccggagat
     1681 cgaaaaggaa ctcgtggctt tggtgcgcga acgcatcggt cctgtggcgt cattccgcga
     1741 cgcacgggtg gtcgcgcgtc tgccgaagac ccggtcgggc aaaatcctgc gggccagcat
     1801 cagaaagatc gccgacggcg aagcggcccc ggtgccgccg accatcgagg atccggctgc
     1861 gctggaagaa ctcgctgctg tgctgtccgg caaaccgtga cggccggcga accgaggcaa
     1921 cgacgtcagg ccggttcaac cggcttggcc gccacagcga cggcaccatc cctggtctcg
     1981 gagcctcggc tgtaaagcca ccggatcacc atcggcatgg tcaatgcctg gaccaacatc
     2041 gaaagcacca cgaccgcata acaaaccacc agtaaaatcg ggcggtactc attgaacggc
     2101 agggtcaggg cgagcgcgat ggagaccccg ccatgcatgc cggcccaggt gagcatgacc
     2161 atgccgcgcc attggcggcg ggtatcgata cggaatacca acaatggcag cataaccgcg
     2221 ctgagccggg acaacagcgc caacggcagc gcgctgagga ctggcaacaa aacctctcgg
     2281 gcaaaattga ttgccagcac ttcaaaaccg atcagcatga acagcatcgc attgagcagg
     2341 tcctcagcga ccgaccagaa cgtcgtcatt tcgccgatca ggagccgtct ggcggcctcg
     2401 cgcggcgcca tggctcgcag gatgagccca catgcgacca cggccgtggg gcctgacacg
     2461 ccgatgatgc cggcaatgcg gtaagtgcca gtgaccaacg tgaatgaaat catcagccac
     2521 aggccaagat cgtcggccca ccgcatcagt cgggaggcga ggaaaccggt ggcgcagccc
     2581 agaaggcccc cgccgatgcc gcc
//
LOCUS       DATAVD010001154         1509 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2343232, whole genome shotgun sequence.
ACCESSION   DATAVD010001154 DATAVD010000000
VERSION     DATAVD010001154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2343232"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(185..1348)
                     /locus_tag="VHX39_21965"
     CDS             complement(185..1348)
                     /locus_tag="VHX39_21965"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3993846.1"
                     /translation="MRAQVGFQWMNVTVLDSERPHSAAQNSFKAALIGRERFDIDWPS
                     IADDRDVRMYVYQSREFLNVWMNTIGRASGIECSFVVVKDRDGQPVLYLPFAVETKFN
                     VRFLRFMDCGVADYNAPIVHAGRKLTQQEFHAIWPEILALLPDFDVVDLKKIASDASG
                     ALNPLTYLACSPHSESGHVLRLVRSPDGNGAPSTSLKQKLGRELRKLGETHAVEFIVN
                     PTGPTAEEFIKKLFDLKRQKYQETDTADFLDVPGVADFYRQIASPQQLGKIGHLSALV
                     VDNVPVSAHLGFIGRDRFYYIMPAYDAAYARHRPGHLLLNYLVDQTTKQGFETLDLGV
                     GDEAYKISWATGRVALYDHQYAMTAAGHVYLQMRRIRRFVKSGGIRTWFRRAG"
BASE COUNT          321 a          421 c          435 g          332 t
ORIGIN      
        1 attctggtcg gttcaaccct ggcttccatc gaccgttcca gcgctcaccc agtcctctgc
       61 gaatatgccg cctgatttgg gtgtgcaatg ccgcacgcat taaagttcgt taaggtggcc
      121 gccgtatgca tctgcaaaca aatcaatttc gcatataggt tccgacggcc gtctgatagg
      181 ctgctcagcc tgcccgacga aaccaagtgc gaattccccc tgatttgacg aaacgccgga
      241 tccggcgcat ctgcaaataa acgtgcccgg ccgcagtcat cgcgtactgg tgatcataga
      301 gtgcaacccg ccctgtcgcc cagcttattt tgtaggcttc gtcacccacc ccgagatcga
      361 gcgtttcaaa gccctgtttg gtcgtttgat cgacaagata attcagcaac aggtgcccgg
      421 gacggtggcg cgcgtaggct gcgtcgtagg cgggcataat gtagtaaaag cgatctctgc
      481 cgatgaatcc aaggtgtgcg gatacgggaa cattatctac cactagcgcc gaaagatggc
      541 cgattttccc aagctgttgc gggctcgcga tttgtcgata gaagtcggca acgccgggca
      601 catcaagaaa gtcggcggta tctgtttcct gatacttttg ccgcttcagg tcgaataact
      661 tttttataaa ctcctcggcc gtggggccgg tcgggttcac aataaattca acggcgtgtg
      721 tttcaccaag cttgcgcagt tcgcggccga gcttttgctt caggctggtt gaaggcgcgc
      781 cgttcccgtc cggtgatcgg accaggcgca gaacgtggcc gctctcgcta tgcggcgagc
      841 acgcaagata ggtcaacgga ttgagggcgc cggaagcgtc gcttgcgatc tttttcagat
      901 cgaccacgtc gaagtccggc agcagcgcca ggatttccgg ccagatggcg tggaactctt
      961 gttgcgtgag tttgcggccg gcgtggacaa tgggtgcatt atagtccgca acgccgcagt
     1021 ccatgaatct gagaaagcgg acattgaatt tcgtttcgac ggcgaacggc aggtagagca
     1081 ccggctgccc gtcacgatcc ttcacgacaa cgaaggaaca ttcgatgccg ctggcgcgac
     1141 cgatcgtgtt catccagaca ttgagaaatt cgcgcgactg atagacgtac atcctgacgt
     1201 cgcgatcgtc ggcaatcgac ggccaatcga tgtcgaaacg ctcgcggccg atcagcgcgg
     1261 ctttgaatga attttgtgca gcactgtgcg gccgctctga atcaaggacg gtcacgttca
     1321 tccactgaaa accgacctgc gcccgcattg ccgtctgtcg ccaccaggcc tttctagctc
     1381 aaggactcgc tgcaaggggt aaatcgggcg gccggaatgg cttccgacct cggctattgg
     1441 ttaatgccga cggcgtcgcg agcggttaag gctgcgaatg gccacaagaa tcagggttaa
     1501 caggcgagg
//
LOCUS       DATAVD010001155         8314 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2533263, whole genome shotgun sequence.
ACCESSION   DATAVD010001155 DATAVD010000000
VERSION     DATAVD010001155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8314
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2533263"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VHX39_21970"
     CDS             <1..333
                     /locus_tag="VHX39_21970"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3993847.1"
                     /translation="HLIYAFLVVYGISYFFTEFGPNATTFVYPAELFPVESRTTGHGI
                     ASAAGKLGGFIGVFTFPPLMAWHGLFSAESGAAVASVLGLLVTVAMLPETKGRSLEEL
                     SEVRVAGQ"
     gene            466..1557
                     /locus_tag="VHX39_21975"
     CDS             466..1557
                     /locus_tag="VHX39_21975"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3993848.1"
                     /translation="MADRPHVLVVGAGIIGASIAWHLARAGARVTVLEANVPGGIATR
                     NSWAWINASWGNPEPYFRLRVRAMQEWRRLEQEVPGLGVTWTGSLLWELPPGQLKALA
                     VEHTAWGYDIRRVDRTAARRIEPHLATPPDFALHVPDEGSVEPLAATLALLSAARGLG
                     ATVIADTPVRRLGLSAGLVSGVETDRMRHTADAVVVACGAGTADLVATVGLRLAVAAS
                     PALLVVTQPHLRCLNGLVMPPDMQVRQTAEGRLVATAGFAATDPGADGSAEATALIDA
                     MRGMFDSGASISPDYHVVGRRPMPGDGCPVVGSVGSIPGLYVAVMHSGITLAPAIGRF
                     VADELLTGKRDNLAAPYRPERLLDTLPAT"
     gene            complement(1559..1840)
                     /locus_tag="VHX39_21980"
     CDS             complement(1559..1840)
                     /locus_tag="VHX39_21980"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3993849.1"
                     /translation="MGRCRRRPAAATSDHADNYVAPNARFRGASRALLAALEARAVER
                     GNLRCTLFSTATAHRFYCARGYVDDGPPDRKFGTEGGYPMSTILVAQEC"
     gene            complement(1842..2873)
                     /locus_tag="VHX39_21985"
     CDS             complement(1842..2873)
                     /locus_tag="VHX39_21985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX3993850.1"
                     /translation="MRVTALRRTTADSVVVTFDAPATFRSFTPGQYLTLRATIDGQDV
                     RRCYSICSGLDEAALRVGIKHLPGGLFSTWANTVLREGDTLQVMRPEGRFGVPIDPAA
                     SRVFAGFAAGSGITPILSIMQTVLAREPGSRFFLFFGNRATSDIMFRDELEDLKDRYM
                     SRLSVFHVLSREQQELDILNGRLDPEKIPALTRLMPPPDHVFVCGPQGMIEGLEPALA
                     MAGVPPDRIHVERFTPSTDTPRPPVVVPRDAPPDAIATLIIDGARIEVPMASGETIIE
                     AALRAGRDPPFSCRAGMCCTCRARLIEGRVEMATNYSLEKWETDAGYVLTCQARPLTG
                     RVVVDYDHV"
     gene            complement(2895..3650)
                     /locus_tag="VHX39_21990"
     CDS             complement(2895..3650)
                     /locus_tag="VHX39_21990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007425025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX3993851.1"
                     /translation="MTGRPGAIGRMLDPGHGLAQSGRMSILMHDLAGADPELRFSPYC
                     WRTRFALAHKGLAVETIPWRFTETAAIAFSGQARVPVIRDNDRVVFDSWSIAEYLEDT
                     YPELPIFNGPGGRAHALFISSWADSVLLGGIARFIVRDLLDVIDPKDQSYFRTSRETR
                     FGMSLEAVQAGREDRVAAFRDTLLPIRLVLRRQKWLGGATPSYADHIIAGTLMWPRCA
                     SRFALLATDDPVAEWFGRMLDQYGGLGRNAKTP"
     gene            3687..4913
                     /locus_tag="VHX39_21995"
     CDS             3687..4913
                     /locus_tag="VHX39_21995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993852.1"
                     /translation="MTDLPPFDDADLFDEAGYLRLYPGIAEAMMQGVVDTAWRHYDQH
                     GRHEGRLPNDVAPAFYLAAYPAIEQDLGRSPTDADAAPHYVTLGRARGYLPNARAPRA
                     ENGAALQSPFGGMWTDHANALDLIQGRLDLGWIRQREAAMLRTFAVEGIVDLDRLVDR
                     DQVTAAALAVAQAFTGMFPELLFVPSASAAEPQRWRPELTEQPMAALDLHMVSRAIRQ
                     LLLDKVLTDFLALMFGAPPRLIESRAFLREAAPPDRDVAWHVCSLPLQFMAVTFALED
                     SQEGPALAWPGSHRLPDLLWAGEYVSLPEAGRADAPDLQAAIAQREVRVRALLHGQEP
                     RRRDAIAGQRAIRHANLIHAVEAPQPPRQRRTLTAWYCPSYVVPCYMETMRARSHSRD
                     GLTFSSGVYPALDPRD"
     gene            4914..5726
                     /gene="hpnK"
                     /locus_tag="VHX39_22000"
     CDS             4914..5726
                     /gene="hpnK"
                     /locus_tag="VHX39_22000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hopanoid biosynthesis-associated protein HpnK"
                     /protein_id="HEX3993853.1"
                     /translation="MQRVVFSADDFGLTPSVNEAVERAHRNGILDQASLMVAGAAAED
                     AVQRARALPSLRVGLHLVVIEGPAVLTPSEIPDLVDARGQFPSDQARLGFRYFFRPSV
                     RRQLAQEIRAQFAAFAATGLTLDHANAHKHMHLHPIVGRLMIEIGREFGLHSIRIPAE
                     PPAILARAGTAVGLGDRALYAWTRLLRHQAQSAGMVTNDHCFGLAWSGHMTHDRVRRL
                     LQNLPDGVSEIYFHPATQRDDALVRLMPNYEHEAEFATLLDRGLVRPVARPA"
     gene            complement(6154..>8314)
                     /locus_tag="VHX39_22005"
     CDS             complement(6154..>8314)
                     /locus_tag="VHX39_22005"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3993854.1"
                     /translation="IVSLLTIAAHHRWRAVQKQLMEMQVRSVFRRMFGSASAILIAVL
                     VVMATGTFCLLGLQFYASWQDLVHANRVSVLAASDRIIYEAAEIVRVGRGQVQSVLLA
                     QDDPQASMAVILAKTDAQMERVLQDIPPDLSDNTAARLADLRTEWTTATGLRNGLQAM
                     AAKPRADRKLTDTQLWFTAVGTVVSNLTEMSAQVAGAARIADPIVGENVLARQYAWAA
                     RDAAGDECATVRSSFGGKSPLSPEQRNQVTTARGRAGQSMAALQLLLDRRGAPVELVQ
                     ADAAAAAAIQAGFKGRDAAYASLGTADQLGGAPWEQQCQGLFAPILHVGTVALDRMQA
                     HAAENRADAIHLMAISGFVLAVASLGLVISVILVRGRVIRPVHQITVAIRRLAANDIT
                     TEVAPPKHQDEFGIMATALEELRQGAVEAVRVAALNEQERLAKIQRAERIDVLVADFE
                     AKTAQLAGVLASASTELESTAGSMSSTAGIADREATAVADAAVEVSASVQTVATAAEE
                     LSVSVGEINRQMAKSSQVATRAVEDAKRTDVTVRSLARGAEKIGDVVRLITAIAAQTN
                     LLALNATIEAARAGEAGRGFAVVANEVKSLATQTSKATEEISVQVTQIQEATSQTVTA
                     IGGITAIIEEIHAISASIAAAVEEQGTATAEIARTIERTSVGTQAVTTSITEVSRSVR
                     ETGAAAGQVLTSAGDVSQQSDRMSREVDAFVAGIRAA"
BASE COUNT         1487 a         2663 c         2596 g         1568 t
ORIGIN      
        1 cacctgattt acgcgttcct ggtggtttac ggcatcagct acttcttcac cgagttcggg
       61 ccgaatgcca cgacctttgt ctatccggcc gagctgtttc cggtggaaag ccggacgacc
      121 ggccacggta ttgcctcggc ggccggcaag ttgggcgggt tcatcggggt gttcacgttt
      181 cccccgctga tggcctggca tggtctgttc agcgccgaat cgggcgccgc tgtcgccagc
      241 gtgcttggct tgctcgtgac cgtcgccatg ttgccggaaa ccaaaggccg cagcctggaa
      301 gaattgagcg aggtgcgggt cgcaggtcag taaccagcgc cagttcatgc cttgtcataa
      361 ctcttctctt tccgtcctgg tcaacgttac gaggcttgca gcggataacc ggcgtatgct
      421 cgaaagccgg cggcgcggcg ctgacgtgcc cggtggagtt atgcagtggc cgatcgtcct
      481 catgtgctgg ttgttggtgc cggcattatc ggagcctcga tcgcgtggca tctcgcccga
      541 gcgggtgcac gcgtcaccgt gctcgaggcc aatgtgcccg gcggcatcgc cacccgcaat
      601 tcctgggcct ggatcaatgc cagctggggc aatccggaac cgtattttcg cctgcgcgtg
      661 cgagccatgc aggagtggcg ccgacttgag caggaggtgc ccggcctcgg cgtgacctgg
      721 accggcagtt tgctctggga gctaccaccg ggccaactca aggccttggc ggtggaacat
      781 acagcctggg gttacgacat ccgccgcgtc gatcgaacag cggcgcggcg gatcgagccg
      841 cacttggcca cgccaccgga cttcgccctg catgtgcccg acgagggatc ggtggaaccg
      901 ctcgcagcga cgttggccct gctgagtgcg gcgcgcggcc ttggcgccac cgtcatcgca
      961 gacacgccgg ttcggcgcct gggtctgtcg gcaggtctcg tttccggcgt cgagacagac
     1021 cgcatgcgtc ataccgcgga tgcagttgtt gtcgcctgcg gggccggcac cgcggacctg
     1081 gtcgcgacgg ttgggcttcg cctggcggtg gctgcgtccc ctgccctcct ggttgtcacg
     1141 cagccccacc tcagatgcct caatggcctt gtcatgccgc cggatatgca ggtgcggcag
     1201 acagcggagg ggcgtctggt cgcgaccgcc ggatttgccg ctacggatcc aggcgccgat
     1261 ggttccgcag aggcgactgc gctgatcgat gcgatgcgcg gcatgttcga ttccggcgca
     1321 tcgatttcgc ctgactatca tgttgttggc cgccgcccga tgccgggtga tggatgtccc
     1381 gttgtcggca gcgtcggctc catcccgggt ctttacgttg ctgtcatgca ctcgggaatt
     1441 acccttgcgc ccgccattgg acgcttcgtt gccgatgagc tgctgaccgg taaacgcgac
     1501 aatctggcgg cgccgtatcg gccggaacga ttgctcgata cgctgcctgc gacttaaatc
     1561 agcactcttg cgcaacaagt atcgttgaca tcgggtagcc cccttcggtg ccgaatttac
     1621 ggtccggtgg cccgtcgtcg acgtagcctc tggcacagta gaaacgatgc gccgttgcag
     1681 tgctgaacag cgtgcagcgc aggttgcctc gttccacggc acgggcttcg agcgcagcga
     1741 gcaatgcccg gctcgcccca cgaaatcggg cgtttggagc aacgtagtta tctgcatgat
     1801 cggacgttgc cgccgcggga cgccggcggc aacggcccat cctatacgtg gtcgtaatcc
     1861 accaccaccc gcccggtcag cggacgggcc tgacaggtga gcacataccc ggcgtccgtc
     1921 tcccactttt ccagcgagta attcgttgcc atttcgacgc gcccctcgat caggcgcgcg
     1981 cggcaagtgc agcacatgcc ggcccggcag gagaacggcg gatcgcggcc ggcccgcaac
     2041 gccgcctcaa taatcgtttc gccgctggcc attggcacct cgatccgtgc gccatcgatg
     2101 atcagcgtcg caattgcgtc cggcggagca tcccgcggca ccacgaccgg tgggcgcggc
     2161 gtgtcggtgg acggagtaaa ccgctcgaca tggatgcgat cgggcggcac gcctgccatg
     2221 gcgagggctg gttccagacc ctcgatcatg ccttgcgggc cgcaaacgaa aacgtggtcc
     2281 ggcggaggca tcaaccgggt cagcgccggt attttttccg gatcaagacg accgttcagg
     2341 atgtccagtt cctgctgttc gcgcgacaga acgtggaaca ccgaaaggcg ggacatatag
     2401 cggtccttca ggtcctcgag ctcgtcgcgg aacatgatgt cgctggtggc gcgattgccg
     2461 aagaacagga aaaaccggct gcccggctcg cgggccagca cggtctgcat gatcgacagg
     2521 atcggcgtaa tgccggaccc cgcggcaaag ccggcgaaca cccgtgacgc ggccggatcg
     2581 atcggcacgc cgaaacgtcc ctcggggcgc atcacctgca gcgtatcgcc ctcacgcaga
     2641 acggtgttgg cccatgtgga gaacaacccg ccggggagat gcttgatgcc gacccgtaac
     2701 gcggcttcgt cgaggccgga acaaatcgag tagcagcgcc ggacgtcctg gccatcgatc
     2761 gtagcgcgta acgtcaaata ctggccgggc gtgaacgaac ggaacgtcgc gggcgcatca
     2821 aatgtcacca cgactgaatc agcggtggtc cgccgcaggg cggtaacgcg caagcgctgg
     2881 aaccgtgctg ccactcaggg agtctttgcg ttacgaccca gaccgccata ctgatcgagc
     2941 atccggccga accattccgc caccgggtcg tcagtggcaa gtaacgcaaa ccggctggca
     3001 caacgcggcc acatcaacgt tcccgcaatg atatgatccg cgtaactggg cgttgcacca
     3061 cccagccatt tctggcgccg cagcaccagg cggatcggca acaacgtatc gcggaacgct
     3121 gccacgcgat cctcgcggcc ggcctggacg gcttccaacg acatgccgaa ccgggtctcc
     3181 cggctggtcc ggaagtagct ctggtccttc gggtcaatca cgtccagcag gtcgcgcacg
     3241 atgaaacgcg cgatgccacc cagcagcacg gagtctgccc aggaactgat gaacaaagcg
     3301 tgggcgcgac cgcctggacc gttgaagatc ggcaactccg gataggtgtc ctcaaggtat
     3361 tcggcgatcg accaactgtc gaaaaccacc cggtcgttgt ctcggatgac cggcacccgc
     3421 gcctgaccgg agaaggcgat cgcggcggtc tccgtgaagc gccacgggat ggtttcgacc
     3481 gccaggcctt tgtgtgccaa agcgaaacgg gtgcgccagc agtagggact gaaccgaagc
     3541 tcgggatcag cgccggcaag gtcatgcatg aggatcgaca tgcgcccaga ttgcgccagt
     3601 ccgtgcccag ggtccagcat ccggccgatt gccccggggc gaccggtcat ggtagcggcg
     3661 cgcatcgttg ttgagaggac ccgttggtga ccgacctgcc gccgttcgac gacgccgatt
     3721 tgttcgacga agcgggttat ctgcggctct acccgggcat cgccgaggca atgatgcaag
     3781 gcgtggtcga taccgcgtgg cgccattatg accaacacgg cagacatgaa ggccgtctgc
     3841 ccaacgacgt cgctccggca ttctatctgg cagcctatcc ggcgatcgag caggacctcg
     3901 gccgcagccc gacggatgcc gacgccgcac cgcactatgt cactttggga cgggcgcgtg
     3961 gctatctgcc taacgcgaga gcgcccaggg cggaaaatgg tgcggcgctg caatcgccat
     4021 tcggggggat gtggacggac cacgccaacg cgctcgacct catccagggc cggctcgacc
     4081 tggggtggat cagacaacgc gaggcagcga tgctgcgcac attcgcggtg gaagggatcg
     4141 tggatttaga tcggttggtc gaccgcgatc aggtcaccgc cgcagcactg gcggtggccc
     4201 aggccttcac cgggatgttt ccggagttat tatttgtgcc ttctgcttcg gccgccgagc
     4261 cgcaacgatg gcgacccgaa ctgaccgagc aaccgatggc ggcgctggat ctgcacatgg
     4321 tttcccgcgc gatccgtcaa ctcttgctgg acaaagtgct caccgacttt cttgcattga
     4381 tgttcggtgc cccccctcgg ctgatcgaaa gccgtgcgtt tctgcgggag gcagcgccgc
     4441 cggaccggga cgtggcgtgg cacgtttgtt cgttgccctt gcagttcatg gccgtaacgt
     4501 tcgcactgga ggacagccag gaggggccgg cattggcgtg gcccggcagc caccggttgc
     4561 ccgacctgct ctgggctggc gaatacgttt cgctgccgga agcgggccgc gccgatgccc
     4621 cagacctgca ggctgccatc gcgcaacggg aggtccgggt ccgcgccttg ctgcatggac
     4681 aggagccacg gcgacgggac gcgatcgccg gccagcgcgc gatccggcat gccaacctga
     4741 tccatgcggt cgaggcacca caaccgccgc ggcaacggcg cacactgact gcgtggtact
     4801 gcccgtctta tgtggtgccg tgctacatgg aaaccatgcg tgcccgaagc cattctcgcg
     4861 acgggttgac gttctcgtcc ggcgtttacc cggcattgga tccgcgcgac tgaatgcaac
     4921 gcgtcgtttt ttccgctgac gacttcggcc tgacgccttc tgtgaatgag gccgtcgagc
     4981 gagcccatcg caacggcatc ctggatcagg cgagcctgat ggttgccgga gcggcggccg
     5041 aggacgctgt ccaacgtgcc cgcgccttgc catcgttaag ggtcggactg cacctggtcg
     5101 ttatcgaggg gcctgccgtg ctgacaccat ccgagattcc cgacctggtg gacgcccgag
     5161 gacaatttcc ctcggaccag gcgcgactgg gctttcggta tttcttccgg ccctcggtgc
     5221 ggcgccaact ggcgcaggaa atccgcgcgc agttcgctgc gttcgcggcc accggcctga
     5281 cgttggatca tgccaacgct cataagcaca tgcatctgca tccgatcgtg gggaggctga
     5341 tgatcgaaat cggtcgcgaa ttcggcctgc attcgatacg aataccggcc gagccaccgg
     5401 cgatccttgc gcgggccggg acagccgtgg gcctcggcga tcgcgcattg tatgcctgga
     5461 caaggctgtt gcggcatcag gcgcagtcgg cgggcatggt caccaacgat cattgcttcg
     5521 gcctggcctg gagcggacac atgacgcacg atcgggtgcg gcgcctgttg cagaatttgc
     5581 ccgacggcgt gtccgaaatc tatttccacc cggcaacgca acgagacgat gcgctggttc
     5641 ggctgatgcc gaactatgag cacgaggccg agttcgcaac gctgctggat cgcggcctgg
     5701 tgagaccagt tgcgaggccg gcataggtta tttcgcaggc atctggcagt gcgaagctcc
     5761 agttcaggaa caccaaggct ttcgtcggag cgccgattgg gttggcggtt gagtttaatc
     5821 cgcgtggacc ttgaaggacg agtgcctttt gccaaagacg gacacaaggt aatctgtggc
     5881 accgtgggtt gcggattcgt ctgagtgagg aatagatttc ctaaagaaag aatctaacac
     5941 agatatgcac agatttcatt ttgtacaata tgacccgggt caatcgatca atcggatgat
     6001 gccaccatcg acaaagtcaa aaaatatttg tgaacatctg tgtgtatctg cgtttgaaat
     6061 attttgcttc gctttcggtc cggccatcga cccggacgtc tgcattgagg cagtgcaaat
     6121 gccccgacaa tgcctaaccc ggatatccga acctcatgcc gcgcggatac ccgcgacgaa
     6181 cgcatccacc tcccgcgaca tccggtcgga ctgctgcgag acatcgccag ccgacgtcag
     6241 cacctgaccg gcggcagcac cggtttcgcg caccgatcgg ctgacctcgg tgatcgaggt
     6301 ggtcactgcc tgagtgccga ccgaggtccg ctcgatcgtg cgggctattt ctgcggtcgc
     6361 tgtcccctgc tcctccaccg ccgccgcaat gcttgcagaa atcgcgtgga tctcttcgat
     6421 aatcgctgtg atgccgccaa tagctgtgac agtctggctc gtagcctcct ggatctgagt
     6481 gacctggacg ctgatttcct cggttgcctt gctggtctgg gtggcgaggc tcttcacctc
     6541 attggccacg acggcgaagc cacggcccgc ttcgccggct cgagccgcct cgatcgtcgc
     6601 attcagcgcc aacagattgg tttgtgccgc aatcgcagtg attaacctga cgacatcgcc
     6661 gattttctct gcgccacgcg ccagagaccg caccgtcaca tcggtccgtt tggcgtcttc
     6721 cacggcacgg gtggccactt gcgaagactt cgccatttgc cgattgattt cgccgaccga
     6781 cacactgagt tcctcagctg ccgtcgccac cgtctgcacg ctggcactga cctcaaccgc
     6841 tgcatccgcc acagcggtgg cctcccgatc agcaatgcct gccgtactcg acatcgagcc
     6901 ggcggtgctc tccagctcgg tcgatgccga ggcgaggacg ccagccagtt gtgccgtttt
     6961 cgcctcgaaa tcagcgacca gaacgtcgat ccgctcggcg cgttggattt tggccaggcg
     7021 ttcctgttcg ttcaacgctg ccacgcgcac cgcctcgacc gcaccctgcc gcaattcctc
     7081 cagtgcggtc gccatgatac cgaattcatc ctggtgcttc ggcggagcca cctcggtggt
     7141 gatatcattg gcagccagcc ggcggatcgc gacagtaatt tggtgaaccg gcctgataac
     7201 acgaccgcgg accagaatca cgctgatcac aaggccaaga ctcgccaccg ccaacacgaa
     7261 accggagatc gccatgaggt gtatcgcgtc ggcgcggttc tccgcggcat gagcctgcat
     7321 tcggtcgagc gcgactgtgc cgacgtgcag aattggtgca aacaggccct ggcactgctg
     7381 ttcccaaggc gctccgccga gttgatcggc ggtgccaagg ctggcatagg cggcgtcccg
     7441 ccccttgaat ccggcctgga tcgcagcagc agctgccgca tcggcctgca caagctcgac
     7501 cggtgcaccg cgccgatcca ataatagctg cagcgctgcc atgctttggc ccgcccgccc
     7561 gcgcgctgtc gtcacctgat tccgctgctc cgggctcaac ggcgatttgc cgccgaatga
     7621 cgatcgcacg gttgcgcatt catccccggc ggcatcgcgc gctgcccagg catattggcg
     7681 cgcgagcacg ttctcgccga cgatggggtc tgcgatcctg gccgcaccag ccacttgcgc
     7741 cgacatctca gtcagattgg aaacgaccgt gccaaccgcg gtgaaccaga gctgcgtatc
     7801 ggttagtttg cggtctgccc gaggttttgc ggccatcgcc tgaaggccgt tacgcaaccc
     7861 ggtcgcggtc gtccattccg ttcgcaggtc ggcaaggcgc gccgccgtat tgtccgacag
     7921 atcgggcgga atgtcctgca agacgcgctc catttgtgcg tcggttttgg caaggatgac
     7981 tgccatcgac gcctgcggat cgtcctgcgc caacagcacc gattggacct ggccacgacc
     8041 gacccgcacg atttccgcgg cctcatagat gatgcggtct gacgccgcca gcacggacac
     8101 acgattggcg tgaacgaggt cctgccagga ggcgtagaac tgcagtccca gcagacaaaa
     8161 cgtcccggtc gccattacca ccagtaccgc gatcaggatc gcactggcag agccgaacat
     8221 tcgccggaaa accgatcgca cctgcatctc catcagttgt ttctggactg cccgccaccg
     8281 atgatgcgct gcgatcgtta acaaactgac aatg
//
LOCUS       DATAVD010001156         1740 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3461721, whole genome shotgun sequence.
ACCESSION   DATAVD010001156 DATAVD010000000
VERSION     DATAVD010001156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3461721"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..218
                     /locus_tag="VHX39_22010"
     CDS             <1..218
                     /locus_tag="VHX39_22010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993855.1"
                     /translation="VLQMGDQVSHMLNPETRHGAALLDSMINQQAQIIAYNNDFRLMT
                     LTIVPPMLLLMVMRRHARPEAMAMGDD"
     gene            complement(246..713)
                     /locus_tag="VHX39_22015"
     CDS             complement(246..713)
                     /locus_tag="VHX39_22015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX3993856.1"
                     /translation="MKIALTVNGETIRTEVEPRVHLGDFLREHLSLTGTHLGCEHGVC
                     GACTVRIDGNLARACLVLAVQADGCDVQTIEGLSDSGEIADLQQAFHERNALQCGFCT
                     PGMLIAAQDLLLRNPDPDRDTIREHLSGNYCRCTGYHAIVDAVMTTAKGRRGD"
     gene            complement(710..1477)
                     /locus_tag="VHX39_22020"
     CDS             complement(710..1477)
                     /locus_tag="VHX39_22020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEX3993857.1"
                     /translation="MKAPAFDYIKVATVAEACAALVQHGPDARLLAGGQSLLPAMNLR
                     LASPSVLIDIGRVHGLDGIEVRDGKLRIGALVRHETALRDAMIANHVPLLTEALRHVA
                     HPAIRARGTIGGNLAHADPASELPACMLALSAVIEVTSPSGTRHVAAEDFFVGLFQTV
                     LLPDEMLTAVEIPLPAPAWFFQEIARRSGDYAIVGLAASGTRLAFFSVADRPVLRQST
                     AALDLDPPSDLQATGAMRRHLANVLRDRALVAFGGRT"
BASE COUNT          331 a          593 c          535 g          281 t
ORIGIN      
        1 gggtcctgca gatgggcgac caagtgtcgc acatgttgaa cccggagacc cggcacggcg
       61 ctgcgctgct ggattccatg atcaaccagc aggcccagat catcgcctac aacaacgatt
      121 tccggctgat gacgctgacc atcgtgccac ccatgctgct gctcatggtg atgcgccgcc
      181 atgcccgccc cgaagcaatg gccatgggag acgattgacc ccggggcacc ggctacacgg
      241 cgggatcaat caccccttcg tcccttggcc gtcgtcatca cggcatcgac gatcgcgtgg
      301 tatccggtgc agcgacagta attcccggac aaatgctcgc gtatcgtgtc ccgatccgga
      361 tcgggattcc gcagcagcag gtcctgcgcc gcgatcaaca tgccgggcgt acagaatccg
      421 cattgcagag cgttccgttc gtgaaacgcc tgctgcaggt ccgcgatctc accactgtcg
      481 gacaatccct cgatcgtttg gacatcacag ccgtccgcct gcaccgccag caccaggcat
      541 gctcgcgcca ggttgccatc gatccgcacc gtgcacgcgc cacaaacccc gtgctcgcag
      601 ccgagatgcg taccggtcag cgacagatgc tcccgcagga agtcgcccag gtgaacccgc
      661 ggttcgacct cggtccggat cgtttcccca ttcaccgtca gcgcgatttt cacgtccggc
      721 caccaaacgc caccagcgcc cggtcgcgca gcacgttggc aaggtgccgc cgcatcgccc
      781 ccgtcgcttg caagtcgctc ggtggatcaa ggtccagcgc ggcggtcgat tgccgcagca
      841 ccggccggtc ggccaccgag aaaaacgcca gccgcgtccc cgatgcggcc aagccgacaa
      901 tcgcgtagtc gccgctgcgc cgagcgatct cttggaaaaa ccaggcaggg gcgggcaggg
      961 ggatttcgac ggcagtcagc atctcatcgg gcagtagtac ggtctggaac aggccaacga
     1021 agaagtcctc ggccgcgaca tgccgtgtac cgctcggcga tgtcacctcg atcaccgcgc
     1081 tcagcgccag catgcacgca ggtaattccg aggccgggtc ggcatgcgcg aggttgccac
     1141 cgatcgtgcc gcgcgccctg atggcggggt gggcaacgtg ccgcagcgcc tcggtcagca
     1201 acggcacgtg attggcgatc atcgcgtctc gcaaagcggt ttcatgccgg accagtgcgc
     1261 cgatccgcag cttgccgtcc cgcacctcga tcccgtccag accatggacg cggccgatat
     1321 cgatcaggac agacggtgag gcgagccgca ggttcatcgc cggcagcaga ctctggccgc
     1381 cggcgagcag ccgcgcgtcc ggcccatgct ggaccagcgc ggcacaggct tcggcgaccg
     1441 tggcaacctt gatgtaatcg aatgccggcg ctttcatccc gtttccctgt tggccgcttg
     1501 cccgatacgc cggtcttggc tagagcggga tcgcccgagg ccaaaggcca gaaggcgcaa
     1561 gtcacgcgat aaacgcaact taaagggcac ccgccggcaa ataacaacgc ggccggcaac
     1621 ggtggctgga aacggaaggc accgcaatgg ccggtacggt tggcatgatc ggtctcggca
     1681 tcatgggcgg ggctatatcc aaaaatctgc tcgaacgcgg ctggagcgtt ttcggcaccg
//
LOCUS       DATAVD010001157         1720 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3273267, whole genome shotgun sequence.
ACCESSION   DATAVD010001157 DATAVD010000000
VERSION     DATAVD010001157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3273267"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..141
                     /locus_tag="VHX39_22025"
     CDS             <1..141
                     /locus_tag="VHX39_22025"
                     /inference="COORDINATES: protein motif:HMM:NF021255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin Xre/MbcA/ParS toxin-binding
                     domain-containing protein"
                     /protein_id="HEX3993858.1"
                     /translation="EEARRFFFQPHPLLEGRRPVDVVLANEFGRPLVEGILGRLQYGS
                     AV"
     gene            138..662
                     /locus_tag="VHX39_22030"
     CDS             138..662
                     /locus_tag="VHX39_22030"
                     /inference="COORDINATES: protein motif:HMM:NF020387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RES domain-containing protein"
                     /protein_id="HEX3993859.1"
                     /translation="MTAQTLDRILTAYRIGDPAGAYQIFDATGSKLWPGRWNTSISPM
                     IYTSETYSLAMLEKLVHGNGHMPPNQHWIEITIPPGVSYEMFSSAHHAGWDTEDCLVA
                     KAFGEAWQQSKRSLLLIVPSVVARMERNVLINDVHPEMQRVTYGLHQPIWWDRRLFST
                     SATAIRLTRRRRKP"
     gene            876..>1720
                     /locus_tag="VHX39_22035"
     CDS             876..>1720
                     /locus_tag="VHX39_22035"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007396481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3993860.1"
                     /translation="MQYTKLGRTGLDVSRLCLGCMSYGGGNSGFHQWSLGEEESRPFI
                     RKALEAGINFFDTANRYSVGKSEEVLGRALNDFARREEVVIATKVFNRMRPGPNGAGL
                     SRKNILFEIDESLRRLGTDYVDLYQIHRFDHATPIEETMEALHDVVKAGKARYIGASS
                     MAAWEFGKALTVAERHGWTRFVSMQNLVNLMYREEEREMLPLCADQGIGVIPWSPQAR
                     GRLTRDWDYKSIRTETDEAFGRLFRNTTEEADKRVVNRVAEVAKARGVPRAQIALAWL
                     LHKPV"
BASE COUNT          358 a          495 c          543 g          324 t
ORIGIN      
        1 gaggaggcac gccgcttctt cttccagccg catcccctgc tggagggccg gcgtcctgtc
       61 gatgtggttc tggccaatga attcggacgg ccgctcgtcg agggcatcct gggacggctg
      121 caatacggat cggcagtgtg acggcgcaaa cgctggaccg gattttgacc gcgtatcgca
      181 ttggcgatcc cgcaggcgct taccagattt tcgatgcgac cggatcaaag ctgtggccgg
      241 ggcgctggaa caccagcata agcccaatga tctacaccag tgagacttac agcctggcga
      301 tgctcgagaa gcttgtccac ggcaacgggc acatgccgcc caatcagcac tggatcgaaa
      361 taaccattcc acccggggtg tcctatgaaa tgttttcgag tgctcatcac gccggctggg
      421 ataccgagga ctgcctcgtg gccaaggcgt tcggcgaggc gtggcagcaa tcaaagcggt
      481 cattgttgct gattgtgcca agtgtggtgg cgcggatgga gcgaaatgtg ttgattaatg
      541 acgtgcatcc agagatgcaa cgagtcacct atggcctgca tcagccgatc tggtgggacc
      601 ggcgtctgtt ttcgacatcc gcgactgcca tcaggttgac caggcggcgt aggaagccat
      661 aggcgagcag taccaacgtg gagtcttcga cgaacagaaa agtggcctgg ttgcgacgac
      721 aatcctgacg tgctgttatg ttggatatat ccaaccaaat atatcgctgt ctgggggctg
      781 caggcgcgat cgaagacctg accgcagcag acgcctacca ttttgccgaa tggctgccgc
      841 agaatatcct ggcggcccca taacaggagt caccaatgca atacaccaaa ctgggccgca
      901 ccggactcga tgtctcccgg ctctgcctcg gttgcatgag ctacggtggc ggcaacagcg
      961 gcttccacca atggtcgctg ggtgaggaag agagccgccc gttcatccgg aaggcgcttg
     1021 aggccggcat caatttcttc gataccgcca atcgctactc ggtcggcaaa agcgaggagg
     1081 ttctcggccg cgcgctcaac gatttcgcgc ggcgcgagga agtggtcatc gccaccaagg
     1141 tctttaaccg aatgcgccca gggccgaatg gcgccgggtt gtcgcggaag aacatcctgt
     1201 tcgaaatcga tgagagcctg cgccggctcg gcaccgatta tgtcgacctc tatcagattc
     1261 atcgcttcga tcacgcaacg ccgatcgaag agacgatgga ggcgttgcac gatgtcgtga
     1321 aggccggcaa ggcgcgttat atcggcgcct cgtcgatggc tgcctgggag tttggcaagg
     1381 ccttgacggt cgccgaacgc cacggctgga cccgcttcgt cagcatgcag aacctggtca
     1441 acctgatgta ccgtgaggag gagcgtgaaa tgctgccgct gtgtgcggat cagggcatcg
     1501 gcgttatccc ctggagcccg caggcgcgcg gcaggctgac ccgcgactgg gactacaaaa
     1561 gcatccgcac ggagaccgac gaagccttcg gccgcctgtt caggaacacg accgaagaag
     1621 ccgataagcg ggtcgtcaat cgcgtcgccg aggtggctaa ggcgcgcggc gtgccgcggg
     1681 cgcaaatcgc gctggcctgg ttgctgcaca agccggtcat
//
LOCUS       DATAVD010001158         5239 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2903564, whole genome shotgun sequence.
ACCESSION   DATAVD010001158 DATAVD010000000
VERSION     DATAVD010001158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5239
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2903564"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2104
                     /locus_tag="VHX39_22040"
     CDS             <1..2104
                     /locus_tag="VHX39_22040"
                     /inference="COORDINATES: protein motif:HMM:NF013225.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX3993861.1"
                     /translation="EFRIDGVGTNIPFLQNILAHNDFVTGNIHTRWVDEHMAELAPPE
                     PKQRTNDQGFAGARVNTRDPLALFAHDAQMKAEQRTDVEVTPDLQGPDGSTGIASPIQ
                     GTIAAISVTVGDAVRKGQQVAVVEAMKMEHVIAAPHSGIVRSVTMAPGDVVREGFPIV
                     FIEQAEVAGAAVTADEAEDLDHIRDDLRETIDRHALTLDENRPDAVARRRKTGHRMAR
                     ENIARLVDPGSFNEYWPLVVARQHQRHSIEALRRNTPGDGVVAGMCSINGDLFDETRS
                     RAALVHYDYTVLAGTQGHRNHYKQDRIFELCQRFRLPLILFGEGGGGRPGEDNIGPRV
                     AIDTHTFTTYSQLSAHVPLIAVVNGRTFAGNTALVACSDVIIATEGSTIGMGGPAMIE
                     GGGLGIYTPEEVGPMSFQVPNGVVDILVKDEFAAVDTVKKYLSYFQGPLAAWDAHDQR
                     RLRHTVPENRLRLYNMREIIETIADKDSVLEIREKFGIGIITAFIRIEGRPMGLIANN
                     PHHLAGAIDSDGADKGARFLHLCDAFDIPVVNLIDCPGIMVGPDVERTALVRHCTRLF
                     NAGANMTAPLFTVVVRKAYGLGAQAMLGAGALVGFFSVAWPTAEFAGMNIEGAVKLGY
                     RRELAAIEDPEARRLEFDRRTAIAYDAAKAVNAVAGGGIDDVIDPADTRLWLANGLRR
                     LPPVPVRTTKKYPYIDPW"
     gene            2336..2473
                     /locus_tag="VHX39_22045"
     CDS             2336..2473
                     /locus_tag="VHX39_22045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3309 domain-containing protein"
                     /protein_id="HEX3993862.1"
                     /translation="MNLILLVIVLMILFGGGGYYYGGPYVGGGLGTILLIVLIVLLVR
                     G"
     gene            complement(2489..3883)
                     /gene="ccmI"
                     /locus_tag="VHX39_22050"
     CDS             complement(2489..3883)
                     /gene="ccmI"
                     /locus_tag="VHX39_22050"
                     /inference="COORDINATES: protein motif:HMM:TIGR03142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcmI"
                     /protein_id="HEX3993863.1"
                     /translation="MFFALVCVVLVLAVLAAVSLPLLSGAHVLPTRGQYDRAVYRDQL
                     QEVERDVARGVLGPKEAGSARLEIQRRLLAVDVSGGSLPDRVVRSPRMAAFVALFVVL
                     GCAGLYWHLGAPALPDVPFADRPVAQQEPGATNVPAPHRDMRNAAARLQQKLRDDPTN
                     AGGWVLYARTESMLGDWQKAADAYKHAIDLGQKDGDVLSAYGEMQVMAADGIVAPAAH
                     DTFVAALAADAGNGVARYYLALADSQAGDGHKAVAAWLELAAGLPEGSPMREAIANRI
                     ADAARNGGFEAPPLPKGLPAEAAPDGPTAEQMQAAAGMSPAERDQMINGMIEKLAAKL
                     KAEPNDLDGWMRLGRAYLVQGKGAPAVDAFDHAAALKPDDPAIKLLTVSALFAGLQPG
                     DALPPRAIALLTAVAAVTPDAPEVLWYLGVVAARDGRTTEAREKWTKLLTALPADGED
                     AKMVKAALGQLPAK"
     gene            complement(3883..4353)
                     /locus_tag="VHX39_22055"
     CDS             complement(3883..4353)
                     /locus_tag="VHX39_22055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein"
                     /protein_id="HEX3993864.1"
                     /translation="MRVLGCLAVALLLLFQLSAIAVEPGEQLKNPALEARAREISSGL
                     RCLVCQNETIDESNASLAHDIRILLRERLTAGDTDEQAVKAIVDRYGDFVLLDPPVKP
                     ATYVLWFGPLAILLAGLLGCMVWLGRRSATSEATMPLTADERHRLDTILREADR"
     gene            complement(4350..4880)
                     /locus_tag="VHX39_22060"
     CDS             complement(4350..4880)
                     /locus_tag="VHX39_22060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HEX3993865.1"
                     /translation="MRNLLFILPVLLFVALAGYFALALRSGDPHELPSALLNKEAPRF
                     ALAGLNGAGVARDALKGGPVLINFFASWCVPCRIEHPLLMRLAEQDHVPLYGIDYKDQ
                     PADAQKLLAQFGDPYRAIGMDRDGRVGLDFGVYGVPETYVLDSTGHIRKRFVGPLTAQ
                     QVDDELLPLLKQLGRP"
     gene            complement(4889..>5239)
                     /locus_tag="VHX39_22065"
     CDS             complement(4889..>5239)
                     /locus_tag="VHX39_22065"
                     /inference="COORDINATES: protein motif:HMM:NF027651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis CcmF C-terminal
                     domain-containing protein"
                     /protein_id="HEX3993866.1"
                     /translation="QGPNYVANDATIEVRHGGNLITVMHPERRFFALQDQTTAVTAIR
                     TNPFADLYVALGDPSDKGWTIRAYWKPLISWIWGGALVMAFGGVVSLSDRRWRVGAAT
                     RARHAVTTQTAPAE"
BASE COUNT         1014 a         1702 c         1574 g          949 t
ORIGIN      
        1 agagttccgc atcgatggcg tcggcacgaa cattccgttc ctgcaaaaca tcctggcgca
       61 taacgatttc gtcacgggca acatccacac gcgctgggtt gacgaacaca tggcggaact
      121 ggcgccgccg gaaccgaagc agcgtaccaa cgaccaaggg ttcgcgggcg cccgcgtcaa
      181 cacgcgcgat ccactggcgc tgttcgccca tgacgcgcaa atgaaggcgg aacagcggac
      241 ggacgtcgag gtcacgccgg acctgcaagg cccggatggc tcgaccggca tcgcctcacc
      301 gatccagggg accattgccg ctattagtgt caccgtcggc gacgccgttc gcaaaggcca
      361 gcaggtcgcg gtcgtcgagg cgatgaagat ggaacacgtc atcgccgccc cgcacagtgg
      421 catcgtgcga tccgtcacga tggcgccggg cgacgtggtg cgcgagggat ttcccatcgt
      481 cttcatcgaa caagccgagg ttgccggcgc cgccgtcact gctgacgaag ccgaggatct
      541 ggaccacatc cgtgacgacc tgcgcgagac catcgatcgt cacgcattga cactggacga
      601 aaatcgtccc gatgcagtgg cgcggcgccg caagaccggc catcgcatgg cgcgcgaaaa
      661 cattgcccgg ttggtcgatc ccggctcgtt caacgaatat tggccgctgg ttgttgcccg
      721 ccaacatcag cgtcattcga tcgaggcgct gcgcaggaat accccagggg acggcgttgt
      781 tgccggcatg tgctcgatca acggcgattt gttcgacgag acaaggtctc gtgcagcact
      841 ggtgcattac gactacaccg tgttggcggg cacccagggc caccgcaatc actacaagca
      901 ggaccgaata ttcgaactgt gccagcggtt tcgcctgccg ctgatcttgt tcggcgaggg
      961 cggcggcggg cggcccggcg aggacaatat cggccctcgt gttgccatcg atacccacac
     1021 cttcactact tattcgcagc ttagcgccca cgtgccgctg attgctgtcg tcaatggccg
     1081 cacctttgcc ggcaacacgg cgttggtggc gtgcagcgac gtgatcatcg ccaccgaagg
     1141 ctccaccatc ggcatgggcg gacccgccat gatcgaaggc ggtggactgg gcatatacac
     1201 gcccgaggaa gtcgggccga tgtcattcca ggtaccaaat ggtgtcgttg atatcctggt
     1261 gaaggacgag ttcgcagccg tcgacacggt gaaaaagtat ctgtcgtatt tccagggccc
     1321 gcttgcagca tgggacgcgc atgatcaacg ccggctgcgt cacaccgtac cggaaaaccg
     1381 gctacggctg tacaacatgc gtgagatcat cgaaaccatc gccgacaaag attccgttct
     1441 ggagatccgg gagaaattcg gcatcggtat catcaccgcc ttcattcgca tcgaaggccg
     1501 gccgatgggg ctgatcgcga acaacccgca tcatttggcg ggagccatcg attccgacgg
     1561 cgccgacaag ggtgcgcggt ttctgcattt gtgcgatgcg ttcgacattc cggtggtgaa
     1621 cctgatcgat tgtcccggca tcatggtcgg ccccgatgtg gaacgaaccg ccctggtccg
     1681 gcattgcacg cggctgttca acgccggcgc caacatgacc gcacctttgt tcaccgtggt
     1741 ggtccgcaag gcttatggtc tgggcgcgca ggccatgctc ggcgcgggcg ctttggtggg
     1801 attcttttca gtggcctggc ccacggccga gttcgcgggc atgaacatcg aaggcgccgt
     1861 caagctcggc taccgccggg aactggcggc aatcgaagac cccgaggcgc ggcgcctgga
     1921 attcgatcgc cggaccgcca tcgcttacga cgccgcaaag gcggtcaatg cggtggccgg
     1981 cggcgggatc gacgacgtga tcgacccggc tgacacccgc ctctggctcg ccaacggtct
     2041 gcgacggttg cccccggtgc cggtgcgcac cacgaagaag tatccctata tcgatccctg
     2101 gtgaaatgac ttttcggtaa tcgccagtgg aacgattccg tcatctccat cgttaaggcc
     2161 atgctttggc caactgatgg aaccgccgaa gaacgcctta ctcatccgtc atggcccaga
     2221 tcgtccgggt catccaaacc agctttgtgc ggcgccaaat ggtccggacg atccgggccg
     2281 tgacgaggaa tgacgttgcc ttggcacaac aatggtttcg aacaggagca actgcgtgaa
     2341 cctcatcctc cttgttatcg ttcttatgat tctgtttggc ggcggtggct attactatgg
     2401 cggcccgtac gtcggcggcg gtctcggcac catcctgctg atcgttctga tcgtcttgct
     2461 ggtgcgaggt tgaacctcgc atcacggctc acttagccgg caattgcccc agcgctgcct
     2521 ttaccatctt cgcatcttcg ccgtccgccg gcagcgcggt gagcaatttc gtccacttct
     2581 cccgcgcctc tgttgtgcga ccgtcgcgcg ccgcgacgac cccgaggtac cacagcacct
     2641 ccggcgcatc cggcgtcacg gcggcaaccg cagtcaaaag cgcgatcgcg cgcggcggta
     2701 acgcatctcc aggctgcaac ccggcaaaca aagccgacac cgtcagcaac tttatcgccg
     2761 gatcatcagg cttcagtgcg gccgcgtggt cgaaggcgtc gaccgccgga gcgcctttgc
     2821 cttgcaccaa ataagccctg ccaaggcgca tccagccatc cagatcgttc ggctcggcct
     2881 ttagtttggc ggcgagcttt tcgatcattc cgttgatcat ctgatcgcgc tcagccggag
     2941 acatccccgc tgctgcctgc atctgttccg cagtcggacc gtccggtgcc gcttccgccg
     3001 gcaggccctt cggcagcggc ggcgcctcga agccgccgtt cctggctgcg tcggcgatcc
     3061 gattggcgat cgcctcgcgc ataggcgagc cctcgggcag gccggcggcc agttccagcc
     3121 acgcggcaac tgccttgtgt ccatcgcccg cctggctgtc ggccagagcc aaatagtaac
     3181 gcgcgacacc attgccggcg tctgctgcca atgccgcaac gaatgtatca tgtgccgccg
     3241 gagcaacgat gccatccgct gccatcacct gcatctcgcc ataggccgaa agaacatcgc
     3301 cgtccttctg gccgagatcg atcgcgtgct tgtaggcatc cgctgccttt tgccagtcgc
     3361 ccaacatgga ttcggtgcgg gcgtaaagca cccaaccccc ggcattggtc gggtcatccc
     3421 gtaatttctg ttgcaatcgc gcggcggcgt ttcgcatgtc tcgatgtggc gcggggacat
     3481 tggttgcccc gggctcctgc tgtgcgaccg gccggtcggc aaacgggaca tcgggcaacg
     3541 cgggcgcgcc gaggtgccaa tacagtccgg cacagcccag taccacgaac agagcaacaa
     3601 aagcagccat acgaggactg cgcacgaccc gatccggcaa cgacccaccg gagacatcca
     3661 ctgccaacaa acgtcgttga atttccagcc gcgcggaccc cgcttccttt gggcccaaca
     3721 cgccgcgtgc cacatcgcgt tcgacctctt gcaactggtc gcgatacacg gctcggtcgt
     3781 attggccgcg ggtcggcaga acatgcgcac cggacaacag cggcagactg actgccgcca
     3841 gcacggccaa taccagaacg acgcagacca gtgcgaaaaa catcagcgat ctgcctctcg
     3901 caagatggtg tccagccggt gccgctcatc cgcggtcagt ggcatggttg cctcagacgt
     3961 ggcggaacgg cgccccaacc agaccatgca acccaggagg ccggccagaa gaatggccag
     4021 cgggccaaac cacaatacgt aggttgccgg ctttaccggc gggtccaaca gcacgaagtc
     4081 gccataacgg tcgacgatgg ctttcaccgc ctgttcatcg gtatcgccgg cggtcaggcg
     4141 ctcgcgcaac aaaatccgga tgtcgtgtgc gagactggcg ttggactcgt caattgtttc
     4201 gttttggcac acgaggcagc gcaacccgga actgatctcc cgcgcgcgcg cctcgagcgc
     4261 cgggttcttg agttgctcgc caggctcgac cgcaatcgcg gacagctgaa acagcaacag
     4321 caaggcgact gccaggcaac ccagaaccct catggccggc ccagttgttt gagcaagggc
     4381 aggagttcgt cgtcgacctg ttgggcggtc aatggaccga cgaagcgctt gcgaatatgg
     4441 ccggtgctgt ccagcacgta ggtctccggc acgccataga cgccgaaatc caacccgacg
     4501 cggccgtctc ggtccatgcc gatcgcgcga tacggatcgc cgaattgcgc cagcaatttt
     4561 tgtgcgtcag ccggttgatc cttgtagtcg atgccgtaca gcggcacgtg atcctgctcg
     4621 gccaaccgca tgagcaacgg atgctcgatg cggcatggca cgcaccacga cgcgaagaag
     4681 ttgatcagca ccggtccgcc tttcaacgcg tcgcgtgcga cgccggcgcc attcagtccg
     4741 gccagggcaa atcgaggcgc ctccttgttc agcaacgccg acggcagttc gtgcggatcg
     4801 ccggaacgca gcgcgagggc gaaataaccg gccaacgcaa cgaacagcag caccggcaaa
     4861 atgaataaca gattccgcac gcctgctctc attcggcagg cgccgtctgg gttgtcaccg
     4921 cgtgacgcgc ccgggttgcg gcgccaacgc gccagcgccg gtcactcagg ctgaccacgc
     4981 cgccgaatgc catgaccagt gcaccgcccc agatccagga aatcagcggc ttccaataag
     5041 cccggatcgt ccatccctta tcggagggat cgccaagtgc cacgtacaaa tcggcgaacg
     5101 gattggtgcg gatcgccgtc actgcggtgg tttgatcctg caatgcgaag aaccgccgct
     5161 cgggatgcat cactgtgatc aggttgccgc catgacgcac ctcgatcgtg gcgtcattgg
     5221 cgacgtagtt gggtccttg
//
LOCUS       DATAVD010001159         2599 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2717427, whole genome shotgun sequence.
ACCESSION   DATAVD010001159 DATAVD010000000
VERSION     DATAVD010001159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2599
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2717427"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..719
                     /locus_tag="VHX39_22070"
     CDS             <1..719
                     /locus_tag="VHX39_22070"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX3993867.1"
                     /translation="DGRQSIMREAAGAKVTDLGAPMDVLWFRLTHRQSDPPQTLGHIE
                     PGRFMIGLDRGDYWQCAYVIPKGGIEAVHQAGLAMFHSAVVAMAPWFADRVDELQSWD
                     DIKLLTVAVNRLTEWSRPGLLFIGDAAHAMSPIGGVGVNLAIQDAVAAANILIPKLRR
                     GKATQDDLRAVQRRREPPTVRTQRLQIFMQNRIVSPVLAGTGPIKIPFMLHMMDWFPI
                     LRRIPARIVGMGFQPEHIRH"
     gene            735..1133
                     /locus_tag="VHX39_22075"
     CDS             735..1133
                     /locus_tag="VHX39_22075"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX3993868.1"
                     /translation="MPRQQIVSNRIGAPSGHFSQANAIEARGRMVFISGMTSKCADGT
                     IAGVGDIEAQTRQMCENVKAAVEAAGGTMADICRVDVYVKDMAGFDIIHRVRREYFPS
                     PPPASTMVAVSGFTHPDYLIEMAAIAVIAD"
     gene            1133..2500
                     /locus_tag="VHX39_22080"
     CDS             1133..2500
                     /locus_tag="VHX39_22080"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX3993869.1"
                     /translation="MDTLAHRRYVPPVPTPPPAPLPMRQFLRAIRENALTIWPERAYH
                     DDMTVRQFLGRTNVLLNEPEAIHRVLVENHANYRRSAASIRILRPITGNGLLLSMGEA
                     WRLQRRTVAPALGPRVIPLLSRHIMAATQEALNALDQSNIDLLTFIQALALDIAGRSM
                     FSLETRQYGPEIRRLLTEFGDRFAQPHLLDMLVPASVPTLRDWRRARFSKRWMHLIET
                     MMQQRIGNPNPSEQPRDLLDLLISARDPETGAGFSPAELRDQVATLLLAGHETTAVTL
                     FWACLMLANAPDVQNWLAEELPGVDLTQDGVLARLVRTRAVVNETLRLFPAAFTLARE
                     AIQPDQLGTLQLPRRAVVMIAPWVLHRHHAFWPDPGAFNPARFMPDAPPPPRFAFMPF
                     GAGPRICVGAQFAMAEAVLVLAAFVQRFQIALRDTRPVLPVAVVTTQPDHAPLFQLTR
                     RPSSQ"
BASE COUNT          478 a          843 c          796 g          482 t
ORIGIN      
        1 ctgacggccg tcaatcaatc atgcgagaag ccgccggcgc aaaggtcacc gatctcggcg
       61 ccccgatgga cgtcctctgg ttccgcctca cccaccgcca atccgacccg ccccaaacat
      121 tgggccatat cgagcctggc cggttcatga tcggcctgga ccggggtgat tactggcaat
      181 gcgcttacgt cattccgaaa ggtggcatcg aggcggttca ccaggctggc ctggccatgt
      241 tccattcggc ggtcgtcgcc atggcaccgt ggttcgccga ccgggtggac gaacttcaaa
      301 gctgggatga catcaaactg ctgacggtcg cggtcaatcg cctgacggaa tggagccggc
      361 cgggattgct gttcatcggc gacgccgcgc acgccatgtc gccgatcggc ggcgtgggcg
      421 taaacctcgc gatccaggac gcggtcgcgg cggccaacat tctgattccg aaacttcggc
      481 gaggcaaagc cacccaggac gatttgcgcg ccgtgcaacg gcgccgcgaa cccccgaccg
      541 ttcgtacgca gcggctgcaa atttttatgc agaatcgtat cgtctctccg gtgctcgccg
      601 ggacgggtcc gatcaagata ccgttcatgc ttcacatgat ggactggttt ccaatactac
      661 gccggatccc ggcgcgcatt gtcggcatgg gctttcagcc cgaacacata cgccactgaa
      721 ccaggagacc accgatgccg cgccagcaaa tcgtttccaa ccgcatcggc gccccgagcg
      781 gccacttctc ccaggccaac gcgatcgagg cccgcggacg gatggtattc atttccggca
      841 tgacctcgaa atgcgccgac ggcacgatcg ccggtgtggg cgatatcgag gcgcagacaa
      901 ggcaaatgtg cgaaaacgtc aaagccgcgg ttgaagccgc cggtggcaca atggcggata
      961 tttgccgggt cgatgtctat gtgaaggaca tggcagggtt cgacatcatc caccgggtcc
     1021 ggcgggagta ttttcccagt ccgccgccgg cctccacgat ggttgcggtc agcggcttca
     1081 cccaccccga ttacctcatc gaaatggccg cgatcgcagt gatcgcggac tgatggatac
     1141 gcttgcgcac cggcggtacg tgccgccagt gcccactcca ccgccggcgc cattgccgat
     1201 gcggcaattc ctccgtgcga tccgggaaaa tgccctgacc atctggccgg agcgggccta
     1261 tcacgatgac atgacggttc gccaattcct tggtcgaacc aacgtgctgc tcaacgaacc
     1321 cgaggccatc caccgcgtgc tggtggaaaa tcacgcgaat tatcggcgat cggccgcctc
     1381 gatccgcata ttgcggccga tcaccggcaa cggtctgctg ctcagcatgg gcgaagcctg
     1441 gcggctgcaa cggcgcacag tcgcacccgc tctggggccc agagtcatac cgttactgag
     1501 tcggcatatt atggcggcaa cgcaggaggc gttgaatgcg ctggatcagt cgaacatcga
     1561 cctgctgacg ttcatccagg cgctggctct ggatatcgcg ggacgctcga tgttctcgtt
     1621 ggaaacgagg cagtatgggc ccgagatcag gcgtctgctg accgaattcg gggatcgttt
     1681 cgctcaaccg catttgcttg acatgctggt gcccgcctcg gtgccgacat tacgcgattg
     1741 gcggcgggca cggttcagca agcgctggat gcatctcatt gaaacaatga tgcaacaacg
     1801 catcggaaat cccaacccct ccgagcaacc cagagatttg ttggatctgt tgatcagtgc
     1861 acgggatccc gagaccggcg cagggttctc gcccgcggaa ctgcgcgacc aggtggcaac
     1921 gctgctgctc gccggtcatg aaacgacagc ggtcaccctg ttttgggcct gcctgatgct
     1981 ggccaacgcg cccgacgtgc agaactggct ggcggaggaa ctgcccggcg tcgacctgac
     2041 ccaggatggc gtgctggccc ggctggtccg aacccgggcc gtcgtgaacg aaacgttacg
     2101 gctgttcccg gccgcgttca ccttggcccg ggaagcgatc cagccggatc agctcggcac
     2161 cttgcagttg ccgcgccgcg ctgtggtgat gatcgcgccg tgggtgctgc atcgccatca
     2221 cgcgttctgg cccgaccccg gcgcattcaa cccggcccga ttcatgcctg atgcgccgcc
     2281 gccgccgcgt tttgcgttca tgccattcgg cgccggcccc cgtatttgcg tcggcgcaca
     2341 gttcgcgatg gcggaggctg ttctggtact cgccgcattc gtgcagcgat tccaaatcgc
     2401 gctacgagac accaggccgg tgctgccagt ggcggtcgtt acgacccaac ccgaccacgc
     2461 acctctgttc caactgaccc gccggccatc gtcgcaatga ggctcaggtt tgtgtcgtgg
     2521 aagcagacgt tttcgccggc gccatgattc cgggacgaat gcgcccggac gtggtctcgg
     2581 cggcgatccc gaagcgaag
//
LOCUS       DATAVD010001160         1688 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1228792, whole genome shotgun sequence.
ACCESSION   DATAVD010001160 DATAVD010000000
VERSION     DATAVD010001160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1688
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1228792"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            146..685
                     /locus_tag="VHX39_22085"
     CDS             146..685
                     /locus_tag="VHX39_22085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993870.1"
                     /translation="MARVSPFEPAYKYFVELCRRCEGNRYVPRIETATQLEGGGHLAV
                     LEYLHAPDAELVEQFLRHWAHPAEADPDLRLLRYEVDSVDRWCRENVRWWGPRVDIGD
                     RHVLLSSDGNPKLIDLFFVERERLIDDLISDPHAFARYMPFDQCRYIFDVADLQDDAT
                     PTEYLDRIRDALAVVASAS"
     gene            763..1302
                     /locus_tag="VHX39_22090"
     CDS             763..1302
                     /locus_tag="VHX39_22090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993871.1"
                     /translation="MASVLVSGGPGAGKSSVAEGLRHRGLQTIDSDYGLARWEDLEGA
                     PATMPAAPDLEWLRHHRWQWIGEQFERVLRECHERPAVICGAAYNMADYLPRFDLLIL
                     LQIDAATMVRRLAHPGRNNDWGKAGATLEWSFNLRRRQEAALLEAGAVCVDGRQPAEH
                     VLDQIARICSGHEIDLSDN"
     gene            1374..>1688
                     /locus_tag="VHX39_22095"
     CDS             1374..>1688
                     /locus_tag="VHX39_22095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993872.1"
                     /translation="MDTIPDELLSALHDRYGISGRAEPLAAGTSDSLLWQLDSAPPVL
                     VRVSRHYTLPDLQRACRVAREFSRMIPETIPPLVAPSGEAAFLWNGQPVTVWPFVNGQ
                     NLD"
BASE COUNT          301 a          504 c          538 g          345 t
ORIGIN      
        1 cgatccggat cttgcgccca tccttggcgc ccggtggtct gggcttgacc accgggcggt
       61 gcgggcacgc ctgaaagctc tcggttggac aatgtgcggc gtgggtgatt gggcctacgc
      121 ctatcgatca ccgagcggtc aacttgtggc gcgggtcagc ccgttcgagc cggcgtacaa
      181 gtatttcgtt gagctgtgcc gacgatgcga gggcaatcgg tatgttccgc gaatcgagac
      241 ggcaactcaa ttggaaggtg gcggacatct cgccgtgctc gaatacctgc acgctccgga
      301 tgcagagctg gtcgagcagt ttctcaggca ttgggcgcat ccagcggaag ccgatccgga
      361 tctgcgactt ctccggtacg aggtcgactc tgtcgaccgg tggtgccgcg agaatgtgcg
      421 atggtggggg ccccgggttg atatcggcga tcgtcacgtc ctgctgtcct cagacggaaa
      481 tccgaagctc atcgatctct tctttgtgga gcgcgaacgc ttgatcgacg acctgatcag
      541 tgacccgcat gcattcgcgc ggtatatgcc atttgatcag tgccggtaca tattcgatgt
      601 cgccgacctc caggacgacg ccacgccgac tgagtatctt gatcgcatcc gcgacgcgct
      661 ggcggtagtt gcatccgctt cctgaatacc gcgtcgtcga atgtctcaat cgcgcagcga
      721 tgcaccttgc aatcttcggg agcaacaggc agggtactga ccatggcgtc agtactggta
      781 agcggcggcc cgggcgcggg caaatcgtcg gtcgccgagg ggctgcggca ccgtggtctg
      841 caaacgattg actctgacta cgggctcgct cgttgggaag atctggaagg cgcaccggct
      901 accatgccgg ccgctccgga cctggagtgg cttcggcacc atcgctggca gtggattggc
      961 gagcagttcg agcgggtgct gcgggaatgc catgagcggc cagcggtcat ctgcggagcc
     1021 gcgtacaaca tggccgatta tctgccgcga ttcgatctgt tgattctgct tcagattgac
     1081 gcggcaacga tggtccgacg gcttgctcac ccgggtcgca acaacgactg gggcaaagcg
     1141 ggcgcgacgc tggaatggtc tttcaatctg cgtcgccgac aggaggcagc gttgctcgag
     1201 gctggcgccg tgtgtgtcga cggacggcaa ccagcggagc atgtcctgga tcagatcgcc
     1261 cgtatatgtt ctggccacga aatcgacctc tccgataact gatccagatt taccgtgctg
     1321 ccgcacgagc gcgagcctgt gcatgtctgc ccattaccaa ttaccatcgc ccgatggaca
     1381 ccattccgga tgagctgctg tcggcgctgc atgatcggta tggcatcagc ggtcgagccg
     1441 aaccgttagc cgcgggcacc agcgactcgt tgctgtggca gctggactcg gctccacccg
     1501 tgctggtgcg agtgtcacgc cactacacgc tgccggattt acagcgggcc tgccgcgtcg
     1561 ccagagaatt ctcccgcatg attcccgaga cgataccgcc actcgtcgcg ccaagcggcg
     1621 aagcggcctt tctgtggaat ggccagcccg taaccgtctg gccgtttgtc aatggccaga
     1681 accttgac
//
LOCUS       DATAVD010001161         4116 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2159089, whole genome shotgun sequence.
ACCESSION   DATAVD010001161 DATAVD010000000
VERSION     DATAVD010001161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4116
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2159089"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1274
                     /locus_tag="VHX39_22100"
     CDS             <1..1274
                     /locus_tag="VHX39_22100"
                     /inference="COORDINATES: protein motif:HMM:NF012363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carboxylesterase family protein"
                     /protein_id="HEX3993873.1"
                     /translation="NVFTPATRAGQKLPVMVWVYGGAYNEGSGSMPISDGNALAKKGA
                     IVVTFNYRVGAFGFLSHPELTAESGHNASGNQALADAIATLKWVKANIAQFGGDPDNV
                     TIFGQSAGACIDAGLVGSPEAKGLFKHAISESGQWMGLNIAKMTPRERDEQATVAEAQ
                     KAGIKTLAEMRAMSAEEVAKTFRGQGMMIDGYIVPQDLSKTFAEGKQNAVDVLTGSNG
                     TELAFGRPQKITPDSWKANMTRQYKDLAPLALTAYPVNNDEEAAKMIASLPSADGMAW
                     AQRLYADDAAKVGKQGWVYHFTFHPPGPPNNPDPGPTHASEIAYVFDNLALPHEIPDA
                     ASPELSAKDPSAVKLADQMSSYWVNFARTGNPNGPGLPHWPSVKELKPGETMILDKNP
                     GKGEALTPAKVALFQGVYDQTVAKPEQLASK"
     gene            complement(1392..1892)
                     /locus_tag="VHX39_22105"
     CDS             complement(1392..1892)
                     /locus_tag="VHX39_22105"
                     /inference="COORDINATES: protein motif:HMM:NF042488.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6644 family protein"
                     /protein_id="HEX3993874.1"
                     /translation="MDLQPLWDKIELSPIGDFVASSSWAFPTIETLHVISIVTVFGTV
                     AMMDMRLIGLVSRDSRVTELSRDNLTWTWGAFLLAAITGTLLWMSKAHVYMKEPWFYA
                     KMILIGVAGVNMAIFHAVTWRTIGQWDAGPPPKAARIAGFTSLALWVVVVACARMIGF
                     TLGIYE"
     gene            complement(1902..2423)
                     /locus_tag="VHX39_22110"
     CDS             complement(1902..2423)
                     /locus_tag="VHX39_22110"
                     /inference="COORDINATES: protein motif:HMM:NF042488.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6644 family protein"
                     /protein_id="HEX3993875.1"
                     /translation="MVAFATWIRSTPISEFALQLDKSHFSRWMQTHQAIPILQMVHLY
                     AISLLFTGYIMVTVRIFMKGGKSRTLAQTLHRFMPWIWWCLLVLATTGWLLAIAEPPR
                     DLTNPAFWTKMIFVPVTALLLLWFHLSMRRHVVEWDTPRGGPIAVKAASVGFIVLWLV
                     IMALGRWIAYVPT"
     gene            2883..3758
                     /locus_tag="VHX39_22115"
     CDS             2883..3758
                     /locus_tag="VHX39_22115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993876.1"
                     /translation="MERLWKCAAAAAAVLLVAQGGALAADQPAKAAGKAKTTHAAAGA
                     HSTMGPATLGGHPNLNGIWQVLNTANWDLRPHDGAQAPVAARQLGVWGAIPPGLGVID
                     GATDVPYKTEAKAQYETNRKAGPAKDPEAACYLPGIPRATYIDSPFQIVQAADGDMLM
                     VYQYAASNRLIKMQKVGIPPIDTWMGTSYGEWDGKTLKVVTLSQNGMTWMDRAGDYLS
                     PNATVTERFTMKDHDHLDYEVTIDDPSVFTHPWKVSMPLYRRVERNAQILDFRCVPFA
                     DLLVYGDLLENKNGK"
     gene            3811..>4116
                     /locus_tag="VHX39_22120"
     CDS             3811..>4116
                     /locus_tag="VHX39_22120"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEX3993877.1"
                     /translation="MGKKMFGVAAAVLALGVAGAASAHHSFSSEFDSTKAVKIDGTVL
                     VFEWVNPHSWIHIMAKDENQGGKVVEWKVEGGAPSALLRRGWNRNSLPKGTHIIVTAY
                     "
BASE COUNT          825 a         1330 c         1301 g          660 t
ORIGIN      
        1 tgaacgtctt caccccggcg acccgggccg gccagaagct tccggtgatg gtgtgggtct
       61 acggcggcgc ctacaacgaa ggctcaggca gcatgccgat cagcgacggc aacgccctgg
      121 ccaagaaggg cgcgatcgtc gtcaccttca actaccgcgt cggggccttc ggcttcctgt
      181 cgcacccgga gctgacggcg gagtccggcc ataacgcctc aggcaaccag gccctggccg
      241 acgccatcgc gaccctcaaa tgggtgaagg ccaatatcgc ccagttcggc ggcgatccgg
      301 acaacgtcac catcttcggc cagtccgccg gcgcctgcat cgacgccggc ctggtcggct
      361 cgcccgaggc caagggcctg ttcaagcacg ccatctccga aagcggccag tggatgggtc
      421 tgaacatcgc caagatgacc ccgcgcgagc gtgacgagca ggcgaccgtc gcggaggcgc
      481 agaaggccgg gatcaagacc ctggccgaga tgcgcgccat gtcggccgag gaggtggcca
      541 agaccttccg cggccagggc atgatgatcg acggctacat cgttccccag gacctgtcga
      601 agaccttcgc cgagggcaag cagaacgccg tcgacgtgct gaccgggtcc aacggcaccg
      661 agctggcctt cggccggccg cagaagatca cgccggactc gtggaaggcc aacatgaccc
      721 ggcagtacaa ggatctggct cccctcgcgc tgaccgccta tccggtgaac aacgatgagg
      781 aagcggccaa gatgatcgcc agcctgccga gcgccgacgg catggcctgg gctcagcgtc
      841 tctacgccga cgacgcggcc aaggtcggca agcagggctg ggtctaccac tttaccttcc
      901 atccgcccgg cccgccgaat aacccggacc ccggcccgac gcatgcctcg gaaatcgcct
      961 acgtcttcga caacctggcc ctgccgcacg aaatcccgga cgcggcctcg cccgagctgt
     1021 cggccaagga tccgtccgcg gtgaagctgg ccgaccagat gtcgagctac tgggtgaact
     1081 tcgcccgcac cggcaatccc aatggccccg gcctgccgca ctggccgtcg gtcaaggagc
     1141 tgaaacccgg cgaaaccatg atcctcgata agaacccggg caagggcgag gccctgaccc
     1201 cggccaaggt cgcgctgttc cagggggtct acgaccagac tgtcgccaaa ccggagcagc
     1261 tcgcctccaa gtaagcgggc tccgcatcgt ttacaaagca aagcggccgg agggaaacct
     1321 ccggccgctt ctttgtttcc ctcagctcgc gcgaagcgcc gaagcgcgcc gccctgccct
     1381 gccctgtccg cttactcgta gatgcccagg gtgaagccga tcatgcgggc gcaggccacc
     1441 accacgaccc acagggccag ggaggtgaaa ccggcgatcc tggccgcctt gggcggcggc
     1501 cccgcgtccc actggccgat cgtgcgccag gtgacggcgt ggaagatggc catgttcacg
     1561 cccgccacgc cgatcaggat catcttggcg tagaaccacg gctccttcat gtagacgtgc
     1621 gccttgctca tccacagaag cgtgccggtg atggccgcca ggaggaaggc gccccaggtc
     1681 caggtgagat tatcgcggga cagttcggtg acgcggctgt cgcgcgacac caggccgatc
     1741 aggcgcatgt ccatcatggc cacggtgccg aacacggtga cgatcgagat gacgtgcagg
     1801 gtctcgatgg tcgggaacgc ccacgacgag gaggcgacaa aatcgccgat gggggacaat
     1861 tcgatcttgt cccagagagg ttgcaaatcc atggaattac ctcaggtcgg gacgtaggcg
     1921 atccagcggc ccagggccat gatcaccagc cagagaacga taaagcccac cgacgccgcc
     1981 ttgacggcga tcggtccacc gcgcggcgtg tcccattcca cgacgtggcg gcgcatggac
     2041 aggtggaacc acaacagcaa caacgcggtg accggcacga agatcatctt cgtccagaac
     2101 gccgggttgg tcaggtcgcg cggcggctcg gcgatagcga gcagccagcc ggtggtggcc
     2161 aggaccagaa ggcaccacca gatccacggc atgaacctgt gcagggtctg ggccagggtc
     2221 cggctcttgc cgcccttcat gaagatgcgc acggtcacca tgatgtagcc ggtgaacagc
     2281 agcgagatcg cgtaaaggtg gaccatctgc aggatcggaa tggcctggtg cgtctgcatc
     2341 caccggctga aatgcgactt atccaactgg agcgcgaatt cggaaatcgg cgtggaccga
     2401 atccacgtcg caaacgcgac catgaaatcg cctatcgaag gcataacgaa gatatcctcc
     2461 cgggagtttt taggttggtg gcgagcggcg cgctggctag tcctgtatac ctatctacgc
     2521 atgccggggg acaagcccct cagcgtcgtt agccgccaca cgcggtacgt tcttgcgttt
     2581 cctgtataca aacagcgtgc gcacagtgaa agcctcggtt agcatggttt cagcgcttaa
     2641 caccgttccg gggattcccg gtcgggtgcg aagcgcgacc gcgaggctta tacagggtcg
     2701 tcaccgctct ggtgttacgg cttggtcata gctgagcggt tgtcacgtgg taggctccgc
     2761 taatgaggcc gtcctggtga tgtcggggct gcaaaaaaaa ttgtgattga ccatcgcttg
     2821 ggtgagggtt gatcgcatat caacatcccc acaggggata taattgggag gaagatctca
     2881 ggatggagcg gttatggaaa tgcgccgccg ccgcggcggc cgtcctactg gtggcgcagg
     2941 ggggggctct ggccgccgat cagcccgcga aagcggctgg taaggcgaag acgactcacg
     3001 ctgccgccgg tgcgcacagc acgatgggcc ccgctactct cggcggtcac ccgaatctga
     3061 acggcatctg gcaggtgctg aacaccgcca actgggatct ccgccctcat gacggagcgc
     3121 aggctccggt cgccgcgcgc caactcggcg tctggggtgc gatcccgccc ggcctcggtg
     3181 tcatcgatgg ggcgaccgac gtcccttaca agaccgaagc caaggcccag tatgaaacga
     3241 accgcaaggc cggaccggcc aaggatccgg aagcggcctg ctatctgcct ggcatcccgc
     3301 gggcgaccta catcgactcg ccgttccaga tcgtccaggc cgccgacggc gacatgctga
     3361 tggtctacca gtacgcggcg tccaaccgcc tgatcaagat gcagaaggtc ggcatcccgc
     3421 cgatcgacac ctggatgggc acctcctacg gcgagtggga cggcaagacc ctgaaggtcg
     3481 tgaccctgtc gcagaacggc atgacttgga tggatcgcgc gggcgactat ctgagcccca
     3541 acgccaccgt gaccgagcgc ttcacgatga aggaccacga tcacctcgac tacgaggtca
     3601 cgatcgacga tcccagcgtg ttcacccatc cctggaaggt gtccatgccg ctctatcgcc
     3661 gcgtggaacg caatgcccag atcctggatt tccggtgcgt gcccttcgcc gatctcctgg
     3721 tctacggcga ccttcttgag aacaaaaatg ggaagtagct gttaagcagc accgtttcgc
     3781 ctgcgcgaac atcaaaagga gtaatgcact atgggtaaga agatgtttgg cgtcgctgca
     3841 gccgtcctgg ctttgggcgt cgccggggcc gcttcggccc accactcgtt cagttccgaa
     3901 ttcgactcca ccaaggcggt gaagatcgac ggcaccgtgc tggtgttcga atgggtgaat
     3961 ccgcactcgt ggatccacat catggccaag gacgagaacc aaggcggcaa ggtcgtggag
     4021 tggaaggtcg agggcggcgc cccgagcgcc cttctgcgcc gcggctggaa ccgtaactcg
     4081 ctgccgaagg gcacccacat catcgtgacc gcctac
//
LOCUS       DATAVD010001162         1700 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3087190, whole genome shotgun sequence.
ACCESSION   DATAVD010001162 DATAVD010000000
VERSION     DATAVD010001162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3087190"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..1663
                     /locus_tag="VHX39_22125"
     CDS             62..1663
                     /locus_tag="VHX39_22125"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3993878.1"
                     /translation="MENQVFDYIVVGAGSAGSVLANRLSANGRHRVLVLEAGRASHPW
                     SRVPVGFARLIENPAANWLYSSEPDAGTGQRRVPIPRGKLLGGSSSINGMVFVRGQSQ
                     DYDTWAQLGNRGWSYRDVLPIFRDMESYQGDADDEYRGRDGLLKVTESNESGPLYDAL
                     IKAAGEVGIQYTKDYNGASQDGIGMTQATIRRGRRMSTAVCYLDPARSRPNLVIQANA
                     LTEALLLEGKRCIGVRYTLNGQSQEARANREVIVCGGSINSPQLLELSGIGQPELLQS
                     LGIEVRHALKGVGENLRDHYAPRMKWTVSPGLGMTYNDKARGLGLVWQALRFGLTHKG
                     LLGLPASPLRAYVRTRAGLDAPDAGISFVPFLVAPNFQLAKQSGITAIMHILRSESLG
                     SIHVASKSANRPPEIRFNFLSSQLDRDVTLEAMRITRRIMMAPAMQGIATGEIAPGGD
                     MQSDDALLDWTRNNAETAYHPVGTCKMGSDPMAVVDEQLRVHGMEGLRVADASIMPTL
                     TSGNTNAPSIMIGEKASRMVLAAAA"
BASE COUNT          304 a          437 c          622 g          337 t
ORIGIN      
        1 agttgacgcc gtttccggcg aaaccgagct attagtctgt tggtatcggg ggaaacgaaa
       61 aatggaaaac caggttttcg attatatcgt ggtgggcgcg ggatcggcgg gttcggtgct
      121 tgccaaccgg ctcagcgcca atggccgaca cagggtgctg gtgctggaag ccgggcgggc
      181 gagtcatccc tggtcgcggg ttccggtcgg cttcgctcgt ttgatcgaaa acccggcggc
      241 caactggctg tattcgtcgg agcctgatgc cggcaccggg cagcgccgtg tgccgatccc
      301 gcgcggcaag ctgctgggcg ggtcgtcgtc gatcaacggc atggtgttcg tgcgcgggca
      361 gtcgcaggac tatgatacgt gggcgcaact ggggaatcgc ggttggagct atcgcgacgt
      421 gctgccgatc tttcgcgata tggaaagcta tcagggggat gccgacgacg aatatcgcgg
      481 gcgcgacggt ctgctgaagg tcaccgagag caatgaaagc ggtccgctgt acgatgcgct
      541 gataaaggcg gccggtgagg tcggcatcca gtacacgaaa gactacaacg gcgcgtccca
      601 ggatggcatc gggatgacgc aggcaaccat ccgtcgtggg cgccgcatga gcacggcggt
      661 ctgttacctc gatcccgcac gcagccgtcc gaacctggtt attcaggcca atgcgttgac
      721 ggaagcgttg ctgctggagg gcaagcgatg cattggcgtg cggtacacgc tgaatgggca
      781 gtcacaggag gcgcgtgcga accgggaggt gatcgtctgt ggtgggtcga tcaattcgcc
      841 gcagttgctg gaactgtcgg ggattggtca gccggaattg ctgcagagcc tggggatcga
      901 ggtccggcat gcgttgaagg gggtcgggga gaatctgcgg gaccattacg caccgcggat
      961 gaagtggacg gtctcgccgg ggttgggcat gacctataat gacaaggcgc gcgggctggg
     1021 gctggtttgg caggcgctga gattcggttt gacccataag gggctgctgg gcctgcccgc
     1081 ctcgccgctt agagcctatg tccgcacgcg ggctgggctg gacgcgccgg atgcggggat
     1141 ttccttcgtg ccgttcctgg tggcgccgaa ttttcagttg gcgaaacaat cggggattac
     1201 cgcgatcatg cacatcctgc ggtcggagag cctcggcagt attcatgtgg cttcgaaatc
     1261 ggcgaaccgg ccgccggaga ttcgtttcaa tttcctgagt tctcagcttg atcgggacgt
     1321 tacgctggag gcgatgcgta ttacgcggcg aatcatgatg gcgccggcca tgcagggcat
     1381 tgcgaccggc gagattgcgc cggggggcga catgcagtcc gatgacgcgt tgcttgactg
     1441 gacgcggaac aatgcggaaa ccgcgtatca tcccgtgggt acctgcaaga tgggatcgga
     1501 cccgatggcg gtggtcgatg agcagcttcg ggtgcatggc atggagggtt tgcgggtggc
     1561 cgatgcgtcg atcatgccga cgctgacgtc gggcaatacc aatgcgccgt cgatcatgat
     1621 tggggagaag gcatcgcgga tggtgctggc cgcggcggcg taggcggttt gttgactatg
     1681 gcggcgaccc gtttcaggct
//
LOCUS       DATAVD010001163         1993 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_115593, whole genome shotgun sequence.
ACCESSION   DATAVD010001163 DATAVD010000000
VERSION     DATAVD010001163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1993
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115593"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1812)
                     /gene="cobG"
                     /locus_tag="VHX39_22130"
     CDS             complement(<1..1812)
                     /gene="cobG"
                     /locus_tag="VHX39_22130"
                     /EC_number="1.14.13.83"
                     /inference="COORDINATES: protein motif:HMM:TIGR02435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016709 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen, NAD(P)H as one donor, and incorporation
                     of one atom of oxygen [Evidence IEA];
                     GO_process: GO:0019250 - aerobic cobalamin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-3B synthase"
                     /protein_id="HEX3993879.1"
                     /translation="MTDNSMSPPATMLVPVIASAAKQSTRLYAAGLRSPRFAGDDAMD
                     SRGPPPVLGGGVHSENQRREVAGWCPGVLRPMRSGDGLIVRLKIGGGIVDARLAARIA
                     NWSHRWGNGQIDLSGRGNLQLRGLAAQNLEALRDAVAEAGLLDPSADGEAVRNVVSSP
                     LAGLDPGAVLDVRPIARALERRLSLDATLHGLPAKFGFVIDDGGTLGLDDVAADIRFK
                     ARSGPDGPGFAIGLAGSLQTLPGACRPEDLVDVAVVLSFAFLGARRGRETSIRRMRDL
                     VAADGSEVIGRAAGLGQNFTIDCTPPRETFGPNRSDDETPAVSTVLPQLAAVLPGLTA
                     LPEAASVVILGLDPRTSPDPRTVGLAGPVAPLSDAATTAPVPPGNAPTTITFLGVGLP
                     LGRIAAADLAVLAAAAETVGAHELRLTPWRMIVVPVRSPQAAHALLARLPITGFILHP
                     GDPRRRIAACPGAPSCARGTTPVRDDATVLAKVLGSSEVLGSGGSTTAGGQGIVVHVS
                     GCEKGCAHPRKAKLTLVAQNGRYQLVRDGSASDVPVERDLTVDQAAVHLVANFARGAP
                     ASDAAALAAAGLGNAVPGEQEFGEAETDTAGAGAARSG"
     gene            complement(1809..>1993)
                     /locus_tag="VHX39_22135"
     CDS             complement(1809..>1993)
                     /locus_tag="VHX39_22135"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF014563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cobaltochelatase subunit CobN"
                     /protein_id="HEX3993880.1"
                     /translation="DLIFDATIGDEAVREFLTRANPAAATAIAERFDEAMRRGLWTAQ
                     RNSAGDITATMRAAAE"
BASE COUNT          364 a          689 c          616 g          324 t
ORIGIN      
        1 gcccgatctt gcagcgccag cccctgccgt gtccgtttct gcctcgccaa actcttgctc
       61 gcccggtaca gcgttcccca atcccgccgc agctaatgct gcggcgtccg atgccggcgc
      121 gccacgagcg aaattcgcca ccaggtgaac ggccgcctgg tccactgtca ggtctcgctc
      181 gacggggaca tcggacgcac ttccatcgcg caccagctgg taacggccgt tctgggccac
      241 gagggtcagc ttcgctttgc gcgggtgcgc gcagcctttt tcgcatccgg acacatgcac
      301 aacgatgccc tgtccccccg ccgttgtgct tccgcctgac ccgaggacct cgctcgaccc
      361 gagtaccttg gccaacacgg tggcatcatc gcgcaccggg gtcgtgccgc gcgcgcacga
      421 gggcgccccc gggcacgcgg cgatgcggcg tcgtggatcg ccgggatgca ggatgaaacc
      481 ggtaatgggc aatctcgcga gcagcgcatg ggctgcctgc ggcgaccgaa ccggaacaac
      541 gatcatccgc cacggcgtca ggcggagttc atgtgcgccc accgtttccg cagccgccgc
      601 gaggacggcc aggtccgctg ctgcgatgcg tcctaacggc agtccaaccc cgagaaaggt
      661 gatggtcgtt ggtgcgttgc ccggtggaac gggagcggtc gtggccgcgt cgctgagagg
      721 cgcgacggga cccgccaaac cgacggtcct cgggtcgggc gaggtcctcg ggtcaagccc
      781 gaggatgacg acggaggcgg cctcaggtaa tgcggtaagc ccaggtaaga cggcagcaag
      841 ctggggtaag acggtagaga cggccggcgt ttcatcatcc gatcggttcg ggccgaaagt
      901 ctcgcgcgga ggcgtacaat cgatcgtgaa gttctgcccg agtccggctg cacgtccaat
      961 cacctcagat ccgtccgccg ccaccaggtc gcgcatgcgg cggatcgacg tttcccgacc
     1021 ccgccttgca ccgagaaacg caaagctcag cacgacggcc acatcaacaa gatcttcggg
     1081 cctgcaggcg cccggcagcg tttgcaatga tcccgccaga ccgatcgcaa acccgggacc
     1141 gtcagggccg gaacgggcct tgaaccgaat atcggcagcc acgtcgtcga gccccagcgt
     1201 gccgccatcg tcgatgacaa atccgaattt tgccggcagc ccgtgcagcg tcgcgtcgag
     1261 cgagaggcgc cgctcaagcg cacgggcaat cggccgcaca tcgagcacag cgccaggatc
     1321 aagcccggca agagggctcg aaacaacgtt ccgcaccgct tcgccatcag cactgggatc
     1381 gagcagaccc gcttccgcaa ctgcatcgcg caaggcctcg agattctggg ctgcgagacc
     1441 acgtaactgc aaattgcctc ggccggacaa atcgatctga ccgttgcccc atcggtgcga
     1501 ccaattcgcg atcctggcgg ccagcctggc gtcaacgata cctccgccaa tcttcaaccg
     1561 cacgatcagt ccatcaccac tgcgcattgg ccgcagcact cctgggcacc accctgcgac
     1621 ctctcttcgc tggttttccg agtgaacccc gccgccaaga acaggtggag ggccgcgcga
     1681 gtccatcgcg tcatcgccgg caaaccgagg cgacctcaag ccagctgcgt acagccgggt
     1741 ggattgcttt gccgcgctcg caatgaccgg gaccaacatc gtggccggag gtgacataga
     1801 attgtctgtc attccgccgc ggcccgcata gtggccgtga tgtcgcctgc ggagtttcgc
     1861 tgtgcggtcc aaaggccacg ccgcatcgct tcgtcgaacc gttccgcgat cgcagttgcg
     1921 gccgcggggt ttgctcgggt cagaaattcc ctgaccgcct cgtcgccgat cgtcgcgtca
     1981 aatatcagat cga
//
LOCUS       DATAVD010001164         8262 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3649727, whole genome shotgun sequence.
ACCESSION   DATAVD010001164 DATAVD010000000
VERSION     DATAVD010001164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8262
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3649727"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..754)
                     /locus_tag="VHX39_22140"
     CDS             complement(<1..754)
                     /locus_tag="VHX39_22140"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX3993881.1"
                     /translation="MALREVWSPTEGAGLIVHRRVGIEVADTATDLDLAIAAGGLPPT
                     GEETTMMTVEDNELLVRVGPGTAMGNLFRRFWLPVLLTSEVAEPDGPPVRLRILGEDL
                     VAFRDTEGRVGVLDAYCTHRRAHLFWGRNEECGIRCVYHGWKFDVAGNCVDLPNAPNG
                     DRIKANMKTRAFPTVERGGMVWAYFGPEQLRPELPAAEVFEAPDSHRHIVKLIAHGNY
                     LQFAEGDIDSRHVSFLHSRLDGVALAGSRLNAF"
     gene            1167..2327
                     /locus_tag="VHX39_22145"
     CDS             1167..2327
                     /locus_tag="VHX39_22145"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HEX3993882.1"
                     /translation="MNEIPTPEARPLNPCFSSGPCAKRPGYTLDALSGALLGRNHRAT
                     ETKAKITEVIDRSRALLGMPDDWRLGVVPASDTGAVEIALWSLLGPRPVDILAFESFG
                     AGWATDILRQLKLPKARVLAAEYGDLPDLAAVDPAHDFIFTWNGTTSGVRVPNADWIA
                     ADRQGLAICDATSAVFAMPVDWQKIDVATWSWQKVLGGEAAHGMLALSPRAVARLESH
                     EPAWPMPKVFRLTNKGKLTEGIFRGDTMNTPSMLCVEDALDGLRWAERIGGLPALFAR
                     SEANLQAVADFVAQSRCFDFLANDPATRSNTSICLKIVSPWFLSLDPDGQAKAAKRIA
                     ALLEKRAIAYDIGSYRDAPPGLRIWGGATVETTDIEALLPWCQWAHDTVAQE"
     gene            2383..3969
                     /gene="serA"
                     /locus_tag="VHX39_22150"
     CDS             2383..3969
                     /gene="serA"
                     /locus_tag="VHX39_22150"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004617 - phosphoglycerate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HEX3993883.1"
                     /translation="MPKVLISDKLSPAAVDIFRRRGIDVDLKPGLTPAELRAIIPAYD
                     GLAIRSATKVTKELLDAATNLKVVGRAGIGVDNVDIRSATARGVVVMNTPHGNTITTA
                     EHAIAMMFALAREIPQADASTRAGKWEKNRFLGVELTAKTLGVIGCGNIGSIVANRAI
                     GLHMKVIAYDPYLSDSRALDLGVEKVELDALLQRADIITLHVPMTDATRNILSADALA
                     RTQQGVRIINCARGGLLDEAALAAAIKSGHVAGAALDVFETEPATDSPLFALDNVICT
                     PHLGAATAEAQENVALQIAEQISDFLLTGAISNAINMASVTAEEAPRLRPYLELCRLL
                     GGFAGQLTQAREGAIRRVTIEYEGLAAGLNTRPLTAAALAGLMSPLMVGVNMVNAAVA
                     ARDHGIEVAETVHDRPSEYQTLVRITIGTDGLERSVAGTLFAGSRPRIVEIKGIKVEA
                     DFAPHMLYVTNQDRPGFIGRFGATLAGAGINIATFHLGRANLGGDAICLVSVDEGVPE
                     DVLAMVRTLPLVVQATALAF"
     gene            3993..4601
                     /locus_tag="VHX39_22155"
     CDS             3993..4601
                     /locus_tag="VHX39_22155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993884.1"
                     /translation="MRRIGLNQLLTLAVLMVPLAAARAQTTRIFAVPPTRWDNAMSRD
                     QPAQILGSSDLANLTGGIVFGLSPAEVNAKLTAPTPGVEWISLPFASEYPDEVRYFWV
                     RFDAVRESPGASTACTGANSYIVFLFRDRGLFRISWRLLPDDTCASTRAAAEDIYARY
                     LAIDGPAALASHYRAGKAEVVEVTDPNVHYLIPYRWANRQQR"
     gene            4764..5336
                     /locus_tag="VHX39_22160"
     CDS             4764..5336
                     /locus_tag="VHX39_22160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993885.1"
                     /translation="MRIILALLCLFATLGAAWAGTTSSDINSGLPPVVKDTARPPDCT
                     VTYLVTDITTNDTIAVRMQIAPNPNDEPVNNVMPCPPDIPPRVASRALDACTRRAADP
                     KSCVFADMGRGFEKQPRLDNTAENNARCVSDKASAIGLACWRSGELQVCDVGCGNNAA
                     SAIAAAVERCEAKHQRQCPITGSLPVLAPR"
     gene            complement(5302..6261)
                     /locus_tag="VHX39_22165"
     CDS             complement(5302..6261)
                     /locus_tag="VHX39_22165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993886.1"
                     /translation="MLRRIVLPCLASLAIYLTVFGLLFDRPLSLGMFRQLMDAKLARG
                     ASIEGRKLVIIAGSNGLYSHRCETMEPLLGIPCVNAGVVVGIGLDYLFARWQALLHPG
                     DIVYLPMEEAQYVHTYAATSVGPDAAIMFRHDWATLSRLSFGRTLGAAFAFDPRAALM
                     SLIETTLVWSGFNDPRAGDVGTTNAWGDHVGHTAALGRANAAHLATMLPFHQTASAIA
                     SGDGTAMIHDFIEWAEAHGVIVVGGLPAGYARSPIPDATRDAIRTVYVTAGAHFIDLH
                     DRYPPSAFFDTPDHLNEAAQIQHSELLAAALAITLAPAQAASR"
     gene            complement(6264..7730)
                     /locus_tag="VHX39_22170"
     CDS             complement(6264..7730)
                     /locus_tag="VHX39_22170"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HEX3993887.1"
                     /translation="MLFQSRTFIFAFLPLCLGGFFLVARLAGPAWALRWLVAASLFFY
                     GWWDPRFVPLLAGSILFNHWMACDIRRLCRAGLPRTAQRSLAAGIVADLSLLALFKYA
                     DFLLHTVAPEQPALNIPLPLAISFFTFQQIMFLVESWRNPERDTDLLHCAAFVTFFPH
                     LIAGPIVRPHDIIPQLQYTSLGYPRSDNISAGLLIFLLGLGKKLVLADLFGGFADIGF
                     NAAAGGAPLSFFEAWYAAGAYALQIYFDFSGYSDMAIGLARMVNIRFPLNFDSPYQAA
                     NISAFWRRWHITLGAFLRDYVYIPMGGSRHGKYRRLSNLLLTMLLVGLWHGAAWRFVL
                     WGGLHGLFLATHAWFRSGGLRLPGPLARALTLLAVVLAWVPFRADGLATAWSMLKAMA
                     GANGIAVPYMIVGFWPSLAWIATPVPVLPYLGDARTLSFPEVTACLALGWFIVLALPN
                     IHAMSERGRSWALTSGFAFTVQALFFAPRVVPFLYFRF"
     gene            7970..>8262
                     /locus_tag="VHX39_22175"
     CDS             7970..>8262
                     /locus_tag="VHX39_22175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEX3993888.1"
                     /translation="MRIRVGIVGISGFGGGEAMRLVAGHPSFELIYAAGEGSAGSRLV
                     DRFPGVPARLAELVIEKWDPVTLPRLDVLFASLPTGASAEALARVPKDVKIVD"
BASE COUNT         1618 a         2637 c         2613 g         1394 t
ORIGIN      
        1 caaaagcgtt cagccgcgac cccgccagag ccacgccatc caagcggctg tgcagaaatg
       61 aaacgtgacg ggaatcgata tcgccctcgg caaactgcag atagttgcca tgcgcgatca
      121 gtttcacgat atgccgatga ctgtccgggg cctcgaacac ctcggcggca ggcagttcgg
      181 ggcgcaattg ctcagggcca aaataagccc agaccatgcc gccgcgttcg acggtcggga
      241 acgcccgcgt tttcatattg gctttgatcc gatcgccgtt tggcgcattg ggcagatcga
      301 cgcaattgcc cgccacgtcg aacttccagc cgtgatagac gcagcggatg ccgcattcct
      361 cattacggcc ccagaacagg tgcgcacgcc ggtgggtgca gtaagcatcc aacacgccga
      421 cgcggccttc ggtgtcccgg aacgcaacca gatcttcgcc aaggatgcgc agtcggacgg
      481 gagggccgtc aggttccgcc acctcggagg tcagcaagac aggcagccag aaacgccgga
      541 acaggttgcc catcgcggtt ccaggcccga cgcgaaccaa cagttcgttg tcttcaacgg
      601 tcatcattgt ggtttcctcg ccagttggtg gcagtcctcc ggcggcaatg gcgagatcga
      661 ggtctgtggc cgtatcggcg acttcaattc caacgcgccg gtggacgatc agacccgcgc
      721 cctcggtggg cgaccagacc tcgcgcaatg ccaccagcgg tcagccagtg acctcattca
      781 gcgggtcgat tgtagcaccg ttttccgtgg tgtcagccgc cccctcggtg gacaaggtca
      841 tcgcatttgc gaggtgcctc ggcacgaatg ccctccccgc gtgaccgtcc ctgcaatagc
      901 tgagatcgcg gagatagtgg aggacacgga gttcttggtg cggcaggccc aatcctgatc
      961 ttctccgcgc cctccgcgcc ctcagagttt aaatggaacg gcgccacgcc acgagcgctt
     1021 ccaatttccc accgaccgcc gcccacccaa atacggcccc tgccataaag gatttttcaa
     1081 ttgacgcggc tgtccgcacg gcgttagacc ccgcctgggc cacgcccccc caccggggcg
     1141 ctcgtcttct gaaagggaga gccggcatga atgagattcc gacgccggaa gcacgtccgc
     1201 tcaatccgtg cttttcatcc ggaccgtgcg ccaaacgtcc cggctatacg ctcgacgcgc
     1261 taagcggtgc gttgcttggc cgcaatcacc gggcgactga aaccaaagcc aaaatcaccg
     1321 aagtcatcga ccggtcccgt gccctgcttg gcatgcccga cgactggcgt ctgggtgtcg
     1381 tccccgcctc cgacaccggc gcggtggaaa tcgctttgtg gtcgctgctg ggcccgcggc
     1441 cggtagatat tctggcattc gaaagtttcg gtgccggttg ggccaccgat attttgcgcc
     1501 aattgaaact accgaaagcc cgcgtgctgg ctgctgaata tggcgacctg cccgatctcg
     1561 ccgcggtcga cccggcgcac gattttatct ttacctggaa cggcaccacc tccggcgtgc
     1621 gcgtgccgaa cgccgactgg atcgctgccg accggcaggg cctggcgatt tgcgacgcca
     1681 cctcggcggt cttcgccatg ccggtcgact ggcaaaaaat cgatgtcgcg acctggtcgt
     1741 ggcagaaggt cctcggcggt gaggcagccc atggcatgct cgctttgtcg ccgcgtgccg
     1801 tggccagact ggagtcgcac gagccggcat ggccgatgcc caaagtgttt cgcctgacca
     1861 ataaaggcaa actcaccgaa ggcattttcc gcggcgacac catgaacaca ccgtcgatgc
     1921 tgtgcgtcga ggatgcgttg gacggcttgc gatgggccga acgcatcggc ggtttgccgg
     1981 cgttgtttgc ccgttccgag gccaatctcc aggcggtggc agacttcgtt gcgcaaagcc
     2041 ggtgtttcga cttcctggcc aatgatccgg cgacgcgatc gaatacctcg atctgcctca
     2101 agatcgtttc gccgtggttc ctgtcgctgg accccgacgg ccaggccaag gccgccaaac
     2161 ggatcgccgc gctgctggag aaacgcgcca tcgcctatga catcggctcc tatcgcgacg
     2221 cgccgccggg attgcgcatc tggggcggtg cgacggtgga aaccaccgac atcgaagcgc
     2281 tgctgccgtg gtgccaatgg gcgcacgata cggttgcgca agaataacgg cctgatcgcc
     2341 ggatcacgta acagacaatc aggcctgtgc cgaggagccg ccatgcccaa ggttctcatc
     2401 agcgataaac tgtcccccgc cgcggtcgat atctttcgcc ggcgcggcat cgacgtcgac
     2461 ctgaaacccg gcctgacacc cgcggaactg cgggcgatca ttccggccta tgacggtctg
     2521 gcgatccgct cggcgaccaa ggtcaccaag gaactgctcg acgccgcaac caacctcaag
     2581 gttgtcggcc gcgccggcat cggtgtcgat aatgtcgata ttcgttcggc caccgcgcgc
     2641 ggtgtcgtgg tcatgaacac gccgcacggc aacaccatta ccaccgccga gcatgcaatc
     2701 gccatgatgt ttgccctcgc ccgggaaatc ccgcaggccg atgcgtccac ccgagccggc
     2761 aaatgggaga agaatcgttt cctcggcgtg gaactgacgg ccaaaacgct tggggtgatc
     2821 gggtgtggca atatcggctc gatcgtcgcc aaccgcgcca ttggcctgca tatgaaagtg
     2881 atcgcttacg acccgtattt gtcggacagc cgcgcgctcg atctcggcgt ggagaaagtc
     2941 gaactcgatg ctttgttgca acgtgccgat atcatcacgt tgcacgtgcc gatgaccgat
     3001 gcgacccgga acattctgtc cgcagacgca ctggcccgga cgcagcaagg cgtgcggatc
     3061 atcaactgcg cacgcggcgg gctgctggat gaggcggcgc tcgccgctgc catcaaatcg
     3121 ggccacgttg cgggtgccgc gctggatgtg ttcgaaaccg aaccggcgac cgattcgccg
     3181 ttgttcgcgc tggacaacgt catttgcacc ccgcatctcg gcgctgcgac ggccgaggcg
     3241 caggaaaacg tggcactcca gattgccgag cagatcagcg acttcctgct gaccggtgcg
     3301 atttccaacg ccatcaacat ggcttcggtg accgccgagg aagccccgcg gctgcgcccc
     3361 tacctggaac tctgccggtt gcttggcggc ttcgcggggc aactgacgca ggcccgcgaa
     3421 ggcgccatca ggcgggtgac gatcgagtat gaaggtctgg ccgccggtct caacacgcgc
     3481 ccgctgaccg ctgcggcgct ggccggactg atgtcgccgt tgatggtggg cgtgaacatg
     3541 gtcaatgctg cggttgccgc tcgcgaccac ggcattgagg tcgcggaaac cgtgcacgac
     3601 cggccaagcg agtaccaaac cctggtgcgc attacgatcg gcaccgatgg actggaacgc
     3661 tcggtggccg gcaccttgtt cgccggatcg cggccgcgga tcgtcgaaat caagggcatc
     3721 aaggtcgaag ccgatttcgc accgcacatg ctgtacgtga ccaatcagga caggccggga
     3781 tttattggcc ggttcggcgc cacgctcgcc ggcgccggca tcaacatcgc caccttccac
     3841 ctcggccgtg ccaatctggg cggcgacgcc atttgcctcg tctcggtgga tgagggcgtg
     3901 ccggaagacg ttctggcgat ggtgcgcaca ttacctctgg tggtgcaggc gacggcactg
     3961 gcattttgat agcgacgaaa ggatgggcag cgttgcggcg catcggcctc aaccagctgc
     4021 tgacgttggc ggtgttgatg gttccactgg cggcggcccg ggcgcagacc acacggattt
     4081 tcgccgtgcc tccgacgcga tgggataatg cgatgtcgcg cgaccagccg gcgcaaatcc
     4141 tgggttcgtc cgatctcgcc aatctgaccg gcggcatcgt gtttggtctt tccccggccg
     4201 aggtcaacgc aaagctgacg gcgccaacgc ctggcgtgga atggatcagc ctgcccttcg
     4261 cctccgaata tccggatgag gtgcgctatt tctgggtccg cttcgacgcg gtccgggaat
     4321 cgccaggcgc cagtacggct tgcacggggg ccaacagcta catcgttttc ctgtttcgcg
     4381 accgcggcct gttccgcatc tcctggcgcc tgttgcccga cgacacgtgt gcatcgacac
     4441 gcgccgccgc cgaggacatt tatgcgcgtt atctggcgat cgacgggccg gcagcgctgg
     4501 cgagccacta ccgggccggc aaggcggaag tggtggaggt taccgatccc aacgtccact
     4561 atctcattcc ctaccggtgg gcgaaccggc aacagcgcta gtactcagaa ttgttgaatc
     4621 gtgacaaagc ccaatcgtca tccccggact tgttccgggg acaatcgcgg cacggtgctg
     4681 atgtgggtcc gcgtgacagg cacgcggatg acggagcggg aatcgcgact cacagtgcac
     4741 tgattgtgga tactggcgtc gcgatgcgga tcatcctggc gctactctgc ctgttcgcca
     4801 cgctcggagc agcgtgggcg ggaaccacgt cgtccgatat caacagcggc ttgccgccgg
     4861 tcgtgaaaga cacggccagg ccgccggact gtacagtgac ttatctggtc acggatatca
     4921 cgacaaacga caccattgcg gtgcgcatgc aaatcgctcc caatccgaac gacgagccgg
     4981 tgaacaatgt catgccgtgt ccgccggaca ttccgccgcg cgtcgcctcg cgagccctgg
     5041 atgcctgcac gcgccgcgcc gccgatccaa agtcgtgcgt tttcgccgat atgggccggg
     5101 gttttgaaaa gcagcccaga ctcgacaaca ccgccgaaaa caacgcgcgc tgcgtgtcgg
     5161 acaaggccag cgctatcggc ctcgcctgct ggcgttccgg cgagttgcag gtgtgcgacg
     5221 tcggctgcgg caacaatgcc gcctcagcga tcgcggcggc ggtggagcgg tgcgaggcca
     5281 agcatcagcg gcaatgtccg atcaccggct cgctgcctgt gctggcgcca aggtgatcgc
     5341 cagcgccgcg gcgagcaact ccgaatgctg gatttgcgcg gcttcattca ggtggtccgg
     5401 cgtatcgaaa aacgccgacg gcggataacg atcgtgcagg tcgataaagt gtgcgcccgc
     5461 cgtgacgtaa accgtgcgga tggcgtcccg cgtcgcatcc ggtatcggcg acctggcgta
     5521 gcccgccggc aggccgccca cgacgatcac gccgtgtgcc tcggcccact cgatgaaatc
     5581 gtggatcatg gcggtgccat cgccggacgc aatcgcggaa gcggtctggt gaaacggcaa
     5641 catcgttgcc aaatgcgcgg cattggcccg ccccagagca gcggtgtggc cgacatggtc
     5701 gccccatgcg ttggtggtgc cgacatcgcc tgcgcgcgga tcgttaaatc ctgaccagac
     5761 cagggtcgtc tcgatcaggc tcatcagcgc ggcgcgtgga tcaaaggcga atgcagcgcc
     5821 cagggttcgg ccaaaggaga gcctggaaag cgtggcccaa tcatgccgaa acatgattgc
     5881 cgcatcgggg ccgaccgatg tcgcggcgta ggtatggacg tactgcgctt cctccatcgg
     5941 cagataaacg atgtcgccgg gatgcagcag cgcctgccac cgcgcgaaca ggtaatcgag
     6001 cccgattccg acgacgactc cggcattgac acaggggatg ccaagcagcg gttccatggt
     6061 ttcgcagcga tgcgaataga ggccattgga gccggcaatg atgaccagtt tccggccctc
     6121 gatcgaggcg ccacgtgcca acttggcatc catcagttgg cgaaacatgc ccagagacag
     6181 cgggcggtcg aacaacagtc cgaacaccgt gaggtaaatc gccagcgacg ccagacacgg
     6241 caggacaatg cgccgcagca tggtcaaaac cgaaaataca ggaagggcac aactctgggc
     6301 gcgaaaaaca gcgcctgcac ggtgaacgca aaccccgacg tcaatgccca gctgcgaccg
     6361 cgttcggaca tggcatggat gttgggcagc gccaggacaa tgaaccagcc aagcgcaaga
     6421 caggccgtga cctcggggaa actgagcgtc cgcgcgtccc ccagataggg cagcaccggc
     6481 accggggtgg cgatccatgc cagcgacggc cagaacccaa cgatcatgta gggcacggcg
     6541 atcccgttgg cgcccgccat cgccttcagc atcgaccacg cggtcgccag tccgtcggcg
     6601 cggaatggta cccaggcgag gaccactgcc agcagcgtca gagccctcgc caacggaccc
     6661 ggcagccgca ggccaccgct gcggaaccag gcgtgggttg ccaggaacag gccatgcaga
     6721 ccgccccaca gcacgaaccg ccatgccgcc ccgtgccaga gcccgaccag caacatcgtc
     6781 agcagcagat tgctcaggcg ccggtacttg ccgtgccggc tgcctcccat ggggatgtag
     6841 acatagtcgc gcaggaacgc acccagcgtg atatgccaac ggcgccaaaa cgcgctgatg
     6901 ttggcggcct gatacgggct gtcgaagttc agcggaaacc ggatgttcac catgcgcgcg
     6961 aggccgatcg ccatatcgga atagccggaa aagtcgaaat agatttgcag cgcgtaggcg
     7021 ccggcggcat accaggcctc gaaaaagctg agcggcgcgc cgccggcggc ggcgttgaag
     7081 ccgatatccg caaagccgcc gaacagatcc gccagcacca gcttcttgcc cagtccgagg
     7141 agaaatatca ggaggccggc actgatattg tcggacctgg gatacccaag cgaggtgtat
     7201 tgcagttgcg gaatgatgtc gtgcggccgt acgatggggc cggcgatcag atgcggaaaa
     7261 aacgtaacga acgcggcgca atgcagcaga tcggtatccc gctccgggtt cctccaggat
     7321 tcaacgagaa acatgatctg ctggaacgtg aaaaagctga tcgccagcgg cagggggatg
     7381 ttcagcgcgg gctgctcggg cgccacggtg tgcagcagga aatcagcata tttgaacaat
     7441 gcgagcagac tgagatcggc cacgatgccg gcggccagcg accgttgcgc cgtgcgtggc
     7501 agaccagctc ggcacaggcg gcggatatcg caggccatcc aatggttgaa caggatggag
     7561 ccggccagca ggggcacgaa acgcggatcc caccagccgt agaagaacaa acttgcagcc
     7621 accagccagc gcaaagccca ggcgggtccg gccaggcggg caaccaggaa gaacccgccg
     7681 agacagagcg gcaggaacgc aaaaatgaag gtgcgcgatt ggaacagcat gccgtggcag
     7741 tggatgccac gcggcggtga aaaaacggtt aacgaggcgg acggccccgt tgtccacccc
     7801 gcaaatctgg atcgtgacgc acaggagcag tcgagccgaa caaggggctc gtctcctcat
     7861 cattcccgcg ctctactcga tccgctcgga tgcttgcggc ctgagccgcc gcgccggcag
     7921 cgcgagttcg ctaaacctgt tcgctcactc cagcagtagg acacccccca tgcgcattcg
     7981 cgtcggcatt gtcgggatca gtggttttgg cggtggcgag gcgatgcgcc tggtcgcggg
     8041 ccacccgtct ttcgagctga tctacgccgc gggcgagggc agcgccggca gccggttggt
     8101 ggaccgcttc cccggtgtgc cggccaggct ggccgagctg gtgatcgaaa agtgggaccc
     8161 tgtgaccctg cccaggctcg acgtgctgtt cgcgtcgctg cccacgggcg cctcggccga
     8221 ggcgctggcg cgcgtaccca aggacgtgaa gatcgtcgac at
//
LOCUS       DATAVD010001165         4594 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3649985, whole genome shotgun sequence.
ACCESSION   DATAVD010001165 DATAVD010000000
VERSION     DATAVD010001165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4594
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3649985"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(124..990)
                     /locus_tag="VHX39_22180"
     CDS             complement(124..990)
                     /locus_tag="VHX39_22180"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3993889.1"
                     /translation="MDYLANSGVLIGIYIILAAGYNLIIGYGGLNTIAHPIFFALGAY
                     TAALLAIDTGLPPVICIGAGIGVAVIASVALAVTTLRISGDYLLIASLGFQLGLLQLI
                     NNLDFTGGPSGLSNIPVTLNGPARGWLYLMITAALALLVIWLVHRGMSGPFGRAVRAM
                     RDDDVACAALGRGLFTMKVVIFAFGCGTAGLAGGMYAYYFQYISPEQFNVAQSATILT
                     MVVLGGIGTIWGPVLGAFVLVALPQVITFLQLPASLVGPLQGLIFTSLVILFLFLRPH
                     GLIGTRTPGAAH"
     gene            complement(995..1924)
                     /locus_tag="VHX39_22185"
     CDS             complement(995..1924)
                     /locus_tag="VHX39_22185"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3993890.1"
                     /translation="MTDPVILLQILWTGIAMSSYFVLFTVAFALTLKVEKLWNFAQAG
                     LMGIAFYSMFWSLNAAHWPTWAGIVASLLLTTAVTIGVEIWAIDVLRRRHSSGLIFFI
                     FTLIFSQFVAFMLTLLFGTEPETIFPSVMSPVRIVGGVAVSDWDLQAIGLTLAMLIGL
                     YLLIRFTRDGQFMLAVADNEKLSEIYGISARRAYILSGVISALLIVTGIWLYGTRAGV
                     TPDVPVDLILTAVIATLIGGLGRVFSAGIVAVGLALLQSFSILFIASKWQGMLLYGIL
                     FFALLVFPRGIPAWRPRRIQPAPKPAATATAGG"
     gene            complement(1938..3080)
                     /locus_tag="VHX39_22190"
     CDS             complement(1938..3080)
                     /locus_tag="VHX39_22190"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3993891.1"
                     /translation="MSDKLSRRLVLSAPAALWAGGAFAQQNEPFRFGALMPTTGPEAG
                     YGLDFVKTYEMAVKDINDKGGVAGRKLEMIVLDTQAKPELAISGANKLIEVDKVAVII
                     TAWSSVVKAVAPIANRTSVLELNMGANSPDIAHLGDYVYTVFPLAEVDVTALAKYTRE
                     KLGKSRAAVLYINNDTGIGGAKIYRDVFTAAGGQVVAFEAYDPKATDFTGVLLKARVG
                     NPDVVHIHGLSELPQVIAQMRQLGMTQQITSYSAGYNPKLLAQLGSAAEGLIVTSLAP
                     TATTNPNVAKLLDLWKQVGRAPNGLPYLQYAWDSTVVVADLFAWVDKNKLAVTGDNLR
                     KALLEIRTFDLPMTGKLVVTDDHRVHKPVYLYVVKNGQFTLLDTIA"
     gene            complement(3667..3741)
                     /locus_tag="VHX39_22195"
     tRNA            complement(3667..3741)
                     /locus_tag="VHX39_22195"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3707..3709),aa:Thr,seq:cgt)
     gene            3820..4254
                     /locus_tag="VHX39_22200"
     CDS             3820..4254
                     /locus_tag="VHX39_22200"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: protein motif:HMM:NF025793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HEX3993892.1"
                     /translation="MQHALDQARAAAARGEIPVGAVVLSPDGRIIARAGNRTESDNDP
                     TAHAEILALRTAAAIRHSPRLPDCDLVVTLEPCPMCAHAISLFRVRRLIFGAYDPKGG
                     GVDHGARIFDAASCHHRPDIVGGVRETESAALLRDFFQAKRQ"
     gene            4261..>4594
                     /locus_tag="VHX39_22205"
     CDS             4261..>4594
                     /locus_tag="VHX39_22205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEX3993893.1"
                     /translation="MPSASFFSAPDLARLPIVVNARAISVSEAIRAGLSVAVIIALNE
                     YLAFAPLREAALAALLTCICDPGGPIRRRVPILLTFALLGAAVTAIYGLLRDFGPAVA
                     LPLGVFGLF"
BASE COUNT          910 a         1522 c         1384 g          778 t
ORIGIN      
        1 cggccccgtt cggaccgatc agcccgacca cgtcgccggc atgcagcgac aggcagatat
       61 catctgcaac gacaatgccg ccaaaccgct tgcagacgtt ctccagccgg aggatctcct
      121 gactcaatgc gccgctcccg gtgtgcgcgt cccgatcagg ccgtgcggac gcaggaacag
      181 gaacaggatc accaatgaag tgaagatcaa gccttgcagc ggcccgacca ggctggctgg
      241 aagctgcagg aaggtaatca cctgcggcag cgccaccagg acgaaggcac cgagcacggg
      301 gccccagatc gtgccgatgc cgcccagcac gaccatcgtc aggatcgtcg ccgattgcgc
      361 gacgttgaac tgctctgggc tgatgtattg gaaatagtaa gcgtacatcc cgccggcgag
      421 gccagcagtg ccacagccga aggcgaagat caccactttc atggtgaaca ggccgcgtcc
      481 cagggcggca caggccacgt cgtcatcacg catggcgcgc acggctcggc cgaacggacc
      541 ggacatgccg cggtgaacca gccagatcac cagcagggcg agggcagcgg tgatcatcag
      601 gtacagccag ccacgcgccg gcccattcag cgtcaccgga atgttcgata gcccggacgg
      661 gccgccggta aaatccagat tgttaatcag ttgcaacaag ccaagctgga agcccaggct
      721 ggcgatcagc aggtagtcgc cggaaatgcg cagcgtcgta accgcgagcg cgacagaggc
      781 gatcaccgcc acgccgatgc ccgcgccgat gcagatcact gggggcaggc cggtgtcgat
      841 agccagcaat gcagccgtat aggcgcccag ggcaaagaag atcggatgcg cgatcgtatt
      901 gagaccgcca tagccgatga tgaggttata gccagcggcg aggatgatgt agatgccgat
      961 cagcacgccg gaattggcaa ggtagtccat gcggtcagcc ccccgccgtt gcggttgccg
     1021 ctggttttgg cgccggttgg atacggcgcg ggcgccaggc cgggatgccg cgcgggaaca
     1081 ccagcagggc aaagaacagg ataccgtaca gcagcattcc ctgccatttg gaggcgatga
     1141 acaggatgct gaagctttgc agcagcgcca gtcccaccgc gacaatgccg gccgagaaga
     1201 cacggcccag gccgccgatc agggtcgcaa tcaccgccgt caggatcagg tcgaccggta
     1261 cgtccggcgt gaccccggcg cgtgtgccgt agagccagat gccggtgacg atcaacaagg
     1321 cggagatgac gccggacagg atgtaggcgc gccgggcgct gatcccgtag atctccgaca
     1381 gcttctcgtt gtccgccaca gccagcatga actggccgtc gcgggtgaaa cggatcagca
     1441 ggtaaagccc gatcagcatc gccagagtca ggccgatcgc ctgcaggtcc caatcgctga
     1501 cggcgacgcc gccgacaatg cgcaccggcg acatcacgct ggggaagatg gtttccggtt
     1561 cggtgccgaa caggagggtc aacataaagg caacgaactg ggagaatatc agggtgaaga
     1621 tgaagaagat cagcccgctg gaatgacgcc gccgcagcac gtcgatcgcc cagatttcaa
     1681 cgccgatggt gacggccgtc gtcagcagga gtgacgccac gatgccggcc caagtcggcc
     1741 aatgggcggc gttcaacgac cagaacatgg agtagaacgc gatgcccatc agcccggcct
     1801 gggcaaagtt ccacagcttc tcgaccttca acgtcaacgc gaaagccacg gtaaacaaca
     1861 cgaagtacga cgacatcgcg atcccggtcc acaggatctg caacaggatg acgggatcgg
     1921 tcattgtcgg ggataagtca ggcgatcgta tcgagcaggg tgaattgccc gttcttcacg
     1981 acgtaaagat agaccggctt gtggacccgg tggtcgtcgg tgaccaccag cttgccggtc
     2041 atcggcaggt cgaaggtccg gatttccagc aatgccttgc gcagattgtc acctgtcacc
     2101 gccagcttgt tcttgtccac ccaggcgaac aggtccgcga ccacgacggt ggaatcccag
     2161 gcgtattgca gatagggcag gccgttcggc gctcggccca cctgcttcca caggtccagc
     2221 agcttcgcca cattgggatt tgtcgttgcc gtcggcgcca gtgaggtgac gatcaacccc
     2281 tcggcggctg aaccaagttg cgccagcaac ttcggattgt agccggccga gtaactggtg
     2341 atctgctgcg tcatacccag ttggcgcatc tgagcgatca cctgcggcag ttccgacaag
     2401 ccgtggatat gcaccacgtc cgggttgccg acgcgagctt tcaacagcac gccggtgaag
     2461 tcggtcgcct tgggatcgta cgcctcgaac gcaacgactt gtccaccggc ggcggtgaag
     2521 acatcgcgat agattttcgc gccgccgatc ccggtgtcgt tgttgatgta aagcaccgcc
     2581 gctcgcgatt tgccgagctt ctcgcgggtg tatttggcga gggccgtcac gtcgacctcg
     2641 gccagcggaa agaccgtgta gacgtaatcg ccgagatggg cgatgtcggg cgaattggcg
     2701 cccatgttca attccagcac cgaggtgcgg ttggcgatcg gggcgaccgc tttcaccacg
     2761 gaactccagg cggtgatgat caccgccacc ttgtccactt cgatcagctt gttcgccccg
     2821 ctgatggcca gttcgggttt cgcctgggtg tcgagaacga tcatctccag cttccgaccg
     2881 gcgacgccgc ctttgtcgtt gatgtccttg accgccatct cataggtctt gacgaaatcc
     2941 agcccatagc ccgcctccgg accggtggtt ggcatcaggg cgccgaagcg gaatggctcg
     3001 ttctgttgtg cgaatgcacc gcctgcccaa agagcggccg gtgccgataa caccaatctg
     3061 cggctcagct tatcgctcat cgtttccccc tggttttctg acaggttcaa gggatcgcgc
     3121 gccgccgtca aggcgggggc ggagcagcga tgccatccgg cgagtcgatc aaagggctag
     3181 tgtcctgcac caggagttcg tcgcatcttg cggcgggctt ctgggaccag caggccactg
     3241 aaaacaaagg gctagtgttt cgaatctgag attcacccac tgtggcgaac ctcagattcg
     3301 ggacactaga agtggatgct gcccacgaga cttacggtgc ctgcggcaat cagagtcccg
     3361 gccgcccctt cgcacacaat tcggatggat ccaaggagac cagtcattcg cccagggtct
     3421 ggtgcgggtt tcttcagttc gtcctcaagg caagtgacgt gggcggcgaa ctctctcccg
     3481 gccgctggcg tcaatccaag cttgcccttc aggtcgcgga tttgcctgac gaggtcagcc
     3541 gtcttgctga gttccgctcc gacttgttga ggggggcttg cgtgagcatt gccgccgaga
     3601 ttgcccgaat agctacctcc ctgacatgta gcgccaggat cgtccgccac agctttggag
     3661 aaaatatggt gccggcgcac agaatcgaac tgtggaccta ctgattacga atcagttgct
     3721 ctacccctga gctacgccgg ccgaccacgc ggcgcccgct atacaatccc cacgccccgc
     3781 aagcaaccag ctataaccac ccgcatgacc ccagacccga tgcagcacgc gctcgaccaa
     3841 gcccgcgccg ccgccgcccg cggcgaaatc cccgtcggcg ccgtcgtcct gagccccgac
     3901 ggccgcatca tcgcccgcgc cggcaaccgc acggaatccg ataacgaccc caccgcccac
     3961 gccgaaatcc tcgccctccg aaccgccgcc gccatccgcc acagcccccg cctgcccgac
     4021 tgcgacctgg tcgtcacgct ggagccatgc ccaatgtgcg cccacgccat cagcctgttc
     4081 cgcgtccgcc ggctcatctt cggcgcctac gaccccaagg gcggcggagt cgaccacggc
     4141 gcccgcatct tcgacgccgc ctcctgccac caccgccccg acatcgtcgg cggcgtccga
     4201 gaaaccgaat cagccgcatt gctgcgcgac tttttccagg ccaagcggca ataacctccc
     4261 atgccatcag cctccttctt cagcgcgccc gacctcgcgc gcctgccgat cgtcgtcaac
     4321 gccagggcga tcagcgtgtc cgaggccata cgcgccggcc tttccgtcgc cgtcatcatc
     4381 gcgctgaacg aatacctcgc ctttgcgccg ctgcgggaag ccgcactcgc ggccctgctg
     4441 acctgcatct gcgaccccgg cggcccgatc cgccgccgcg tgccgatact gctgaccttc
     4501 gcgcttctcg gcgccgccgt aacggcaatc tacggcctgt tgcgcgactt cggccccgcc
     4561 gtcgccctcc cactcggcgt attcggcctg ttct
//
LOCUS       DATAVD010001166         1532 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2904190, whole genome shotgun sequence.
ACCESSION   DATAVD010001166 DATAVD010000000
VERSION     DATAVD010001166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2904190"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..644
                     /locus_tag="VHX39_22210"
     CDS             <1..644
                     /locus_tag="VHX39_22210"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3993894.1"
                     /translation="SAPGFYLRQSGDTLITTVAGFALAVLLGVSMAIGIVYSRLLERV
                     IYTLLVALNSLPKVALAPLFVIWMGTGVEPKIAIALMLAIFSIVVDMVLGLRSIDPDI
                     LAMAYVSRARPIAVLWKIRLPNALPTLFAGMKVGISFALVGAIVGEFVAGSDGLGTAI
                     LIAEGQFDTTRVFAALVMLGLLGTLLFYAIEFAETLLLPWHPSHRARHGNARG"
     gene            complement(645..>1532)
                     /locus_tag="VHX39_22215"
     CDS             complement(645..>1532)
                     /locus_tag="VHX39_22215"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03860.1"
                     /note="This protein belongs to a clade of FMN-dependent
                     monooxygenases, within a broader family of
                     flavin-dependent oxidoreductases, the luciferase-like
                     monooxygenase (LMM) family, some of whose members use
                     coenzyme F420 rather than FMN; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NtaA/DmoA family FMN-dependent monooxygenase"
                     /protein_id="HEX3993895.1"
                     /translation="DGAAQNYGREGQVPHDERYDLADEFADLVTKLWDAWEPDAVVLD
                     REAPLFADGSKVHAVNHEGKYFRCRGPLNAPRSPQGRPVICQAGGSARGQQFSARWAD
                     TIITDAVNIEEMKTYRAEVRHRAAAFGRDPDSVKILFLAFPMVDTTMAAARERRRLQR
                     EGSARDLDMQLSSMSRLTNIDFSRFDLDEPLPDWLTTNGHQSSLAKWIGKTPREVALS
                     QATKAGIDFTGTPDHVAGMMQEIMEEVGGDGFLIFNGLFDRRYIIEVCDGLVPELQRR
                     GLTRTAYSHALFKDNLLEF"
BASE COUNT          263 a          500 c          450 g          319 t
ORIGIN      
        1 cctcggcgcc cgggttttat ctgcgccagt ccggcgacac actgatcacc acggtcgcgg
       61 gcttcgcgct ggccgtgctg cttggtgtgt caatggcgat cggcatcgtt tattcacggc
      121 tgctggagcg ggtgatctat accctgctgg tggcactgaa cagtttgccg aaggttgcgc
      181 tggcgccgct gttcgtgatc tggatgggca ccggggtcga accgaaaatc gccatcgccc
      241 tgatgctggc gattttctcc atagtcgtgg acatggtgct tggcctgcgc tcgatcgatc
      301 cggacattct ggccatggcc tatgtcagcc gcgcccgacc gatcgccgtg ctgtggaaga
      361 tccgtctgcc gaacgctttg cccacgttgt tcgctggcat gaaagtcggg atcagctttg
      421 ccctcgtcgg cgccatcgtc ggcgaattcg ttgccggatc ggacggactg ggcaccgcga
      481 tcctgatcgc cgagggtcag ttcgacacga cgcgcgtgtt tgccgcgttg gtgatgttgg
      541 gactgctcgg cacgttgttg ttctatgcga tcgagttcgc cgagacgctg ttactgccct
      601 ggcacccatc gcaccgggca cgacacggca acgcgcgagg ctaatcagaa ctccagcaaa
      661 ttgtccttga acaaggcgtg cgaataggcc gtccgcgtca ggcctctgcg ctgcagttca
      721 ggcaccagac cgtcgcacac ttcgataatg tagcgccggt cgaacaaccc gttgaaaatc
      781 agaaacccgt cgccgccgac ctcttccatg atctcctgca tcatgcccgc cacgtggtcg
      841 ggtgtgccgg tgaaatcgat gccggctttg gtcgcctggc tcaacgcgac ctcgcgtggc
      901 gtcttgccga tccattttgc cagtgaagat tggtgcccgt tggtggtcag ccaatccggc
      961 agcggttcat ccaggtcgaa tcgagaaaaa tcgatgttgg tcaggcgtga catcgacgac
     1021 agttgcatat ccaaatcgcg cgccgacccc tcccgctgca atcgccgccg ttcccgcgcc
     1081 gctgccatcg tggtgtcgac catcggaaac gccaggaaca gaattttcac actgtccgga
     1141 tcgcgcccga acgcggccgc gcggtggcgc acctcggcgc gataagtctt catttcctca
     1201 atattaaccg catcggtaat gatcgtgtcc gcccatcgcg ccgagaactg ctgtccgcgt
     1261 gccgagcctc ccgcctgaca gatcaccggc cgtccctgcg gcgagcgcgg cgcattcagc
     1321 gggccacggc agcggaaata cttaccctcg tgattgaccg catgcacctt gctgccatcg
     1381 gcaaacagcg gcgcctcgcg atcgagcacc acggcatccg gttcccacgc atcccacaac
     1441 ttcgtgacca ggtcggcgaa ttcgtcagcc agatcgtagc gctcgtcgtg cggcacctga
     1501 ccctcgcggc cataattctg cgccgcgccg tc
//
LOCUS       DATAVD010001167         5102 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1042188, whole genome shotgun sequence.
ACCESSION   DATAVD010001167 DATAVD010000000
VERSION     DATAVD010001167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5102
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1042188"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..265
                     /locus_tag="VHX39_22220"
     CDS             <1..265
                     /locus_tag="VHX39_22220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993896.1"
                     /translation="AVPMISGMPALFTATALTPVSAYRLDKDSIAAVMRVKPELSESL
                     EAQALRGNAWIRCETEANMNVNTGRSDMLARLRRFLHRLNADA"
     gene            complement(819..2249)
                     /locus_tag="VHX39_22225"
     CDS             complement(819..2249)
                     /locus_tag="VHX39_22225"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEX3993897.1"
                     /translation="MHPRRFCLMAATIVAGGLLATPGRADDLGASRAELINNLLPTVV
                     NVSVMKTEADEPAPAMASAAVPSPKPADAEHDTIKAYVGSGFIIDPSGLIVTNFHVVD
                     NAFEITVTLSDGTRLPAKMQSGSRLADIALLKVNAGKPLPAAHWGNSDRLHVGDQVFA
                     AGNPFGIGQSVSGGIVSGLNRDIMDSPYDDFIQTDAMINHGNSGGPLFDMQGNVIGVD
                     SDILSPTTGSVGLGFAIPANSAKFVVDRLRSYGWLRPGWIGIKVQQVTPKMAAAMGMR
                     EPEGSIVAWVRQDGPAGSAGVSVGDVILRFDGKPLGDERALLRDIATNPAGEKLTLSV
                     RRGAVTRDIAITAQQWPRDQWDMRDAPEMVKHPKIVIPRDLGLRLSTVDHGREQTLGV
                     MGGQKAVMITGVLPNSDAAAQGVAAGDMILRVQGASVDTPADVQSGIDAARSEKRADV
                     LMLIVQKTSSMPGPKWVALRLLSDQG"
     gene            complement(2258..3331)
                     /locus_tag="VHX39_22230"
     CDS             complement(2258..3331)
                     /locus_tag="VHX39_22230"
                     /inference="COORDINATES: protein motif:HMM:NF025585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4331 family protein"
                     /protein_id="HEX3993898.1"
                     /translation="MSHHFDTPTVLKDPRVNVCDLYLFQGSPGHTVMAMTVNPDAGIS
                     GPETFHDEGLYAFRFDLNHDLHEEVTFKLRFGPVEHADAEEHRHVQIVELRRADGNAA
                     RLGAEGELLAKGHTGEVIEARSGVKLYAGLAPDLFAGDAAALGVFRTALFKDNRFDPL
                     AFRNHRNFFARRNVTAIVVELPSRLIGHGPVRAWATASMYGHAPEMQVSRWGLPLVTN
                     VFMPDADMKEKFNRSTPADDQSSFIAQVGGVAEKITTLSGSAANPSEYARQMTARLFP
                     TMLPYELDTPAAFDFADFNGRALTDDVMDVILTLASNSALADGVAPDPHRTRRDFPYF
                     GSPFTENEQKDVPPARPGAQKKW"
     gene            complement(3341..3766)
                     /locus_tag="VHX39_22235"
     CDS             complement(3341..3766)
                     /locus_tag="VHX39_22235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993899.1"
                     /translation="MEARQDAFPHGEELHVWAELRHPDGARTRVGSPLFAAYLAAFPE
                     MAGVYHTSSPADDRSRFAGVVSDHIAQSLYGWCAADARAYGRRLAAVLLPDVIRFYPD
                     RPTGFSFASRNGHHPADDVSSVTKTLLAGRIGTFASSMS"
     gene            complement(4114..4560)
                     /locus_tag="VHX39_22240"
     CDS             complement(4114..4560)
                     /locus_tag="VHX39_22240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993900.1"
                     /translation="MTDGVNRRVCINAGWYDMRRLPFNPAVIEPSLLKNGAPVTLSGV
                     RAAASGRAFEDVHHRANSIGGNMGILRLAVSDPPVKPLDLCDDKVLSGGPARRIIRQA
                     ARRQLRVLAGRYKFVPEHRYDAEKVLATLPRSFLDHLAPTRTLAIA"
     gene            complement(4686..>5102)
                     /locus_tag="VHX39_22245"
     CDS             complement(4686..>5102)
                     /locus_tag="VHX39_22245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993901.1"
                     /translation="ASVAFAQSKTPGGMPPPTGMSLADSTAMRFPQPVRVGDLIGREV
                     LRPVESQDVLGRVRRLVRDGSGQIMVVVDFGGFLGFGARPIAVPVDAMVLLGQDMEIV
                     AFTPRQLRQLPTFSPAGTTDVADDTIIKVGLAKPSH"
BASE COUNT         1018 a         1601 c         1589 g          894 t
ORIGIN      
        1 cgccgtgccc atgatcagcg gcatgcccgc gctgttcacc gcgaccgctc tgacacctgt
       61 atcggcatat cgtctggaca aagactcgat cgccgccgtc atgcgggtca agcccgaact
      121 gtccgagagc ctggaggccc aggcgctacg cggcaatgcc tggatccgct gcgagacaga
      181 ggcgaacatg aacgtgaata ccggccggtc cgatatgctg gcgagattac gccggtttct
      241 ccatcggctg aacgctgacg cctagtggtc catgtcgtta aaaatgatcg gttggctggt
      301 ttctgtgcca gtctgaggca cgtccccatc gccgcggagt caggatgttg aacgcggtcg
      361 ttgaatgacg gtccggtgtc tcgccgttcg cctccgaaga gggtgtcggg ccagggattt
      421 ctcaacacgg aggaagcacg agggccgcca agggccacga agaagaacgt tgcgagacct
      481 gacgaggggg gtgaatgtta ggcaacaggc cagccaaaag gccattgaca tgccgatgtg
      541 tccgcaacgg cacgtcgcgc gccagaagcg gcacggcgac gctccgtggc ccacggtggc
      601 cctcgttcgt cctccgtgca taaaaaagat ggaagagcgg ccgaacgcgc actgtacacc
      661 ctgcccgcgt ccgcgaaacc acgtgtgcca acgcacccga gcagggtcga acatacaatt
      721 cgtgtaaggc accgccaaaa gtgatggggg cgtcggcaac gccatagcgg gtcggtcatg
      781 taccgggacc aacccatcat ttccaacgac gcaaacgact agccctgatc gctcagcaat
      841 cgcaatgcca cccattttgg tcccggcatt gaggacgtct tctgcacgat cagcatcagc
      901 acatcggcac gtttctcgga tcgtgcggca tcgatgccgg actgcacgtc agccggtgta
      961 tcgaccgacg caccctggac acgcaggatc atatccccgg cggcgacgcc ttgcgctgcc
     1021 gcatccgaat tcggcagcac accggtgatc atgaccgcct tctggccgcc catcacgccg
     1081 agcgtctgct cgcgcccgtg gtccacggtg gaaagcctca aacccagatc tcggggaatg
     1141 acgatcttcg gatgcttcac catctcgggc gcgtcgcgca tgtcccactg atcgcggggc
     1201 cactgttgcg cggtaatcgc gatgtcccgc gtgacggctc cccggcggac agacaaggtc
     1261 agcttctcgc cggcggggtt tgtggcgata tcgcgcaaca gggcacgttc gtcgccgaga
     1321 ggcttgccat cgaaacgcag gatcacgtca ccaactgaca cacctgctga cccggccggc
     1381 ccatcctgcc tgacccaggc gacaatcgag ccctccggct cccgcatgcc cattgcagcg
     1441 gccattttag gtgtcacctg ctgcaccttg atcccgatcc accccggacg aagccagcca
     1501 tagctacgca agcggtcgac gacgaatttg gcgctgttcg ccgggattgc gaaaccgaga
     1561 cccacggaac ccgtggtcgg cgacaggatg tcggaatcga cgccgatgac gtttccctgc
     1621 atgtcaaaca acggaccacc ggaattgcca tgattgatca tcgcgtcggt ctgaatgaaa
     1681 tcgtcgtagg gggagtccat gatgtcccgg ttcaatccgc tgacaatccc gccggagact
     1741 gactgtccaa tgccgaacgg attgcccgcg gcgaagacct ggtcacctac atgaagccga
     1801 tcgctgttgc cccagtgtgc ggcaggcagc ggcttgccgg cgttgacctt caacagggcg
     1861 atatcggcca gacgcgaccc gctttgcatt tttgccggca gtcgcgtgcc gtccgacagc
     1921 gtcaccgtga tctcgaaggc attgtctacg acatggaaat tcgtcacgat cagacccgac
     1981 ggatcgatga tgaagcccga cccgacatag gccttgatgg tgtcatgttc ggcatccgcc
     2041 ggcttcggcg agggcacggc ggcggaggcc atggccgggg ccggttcatc cgcctcagtc
     2101 ttcatgaccg agacattgac cacggtcggc agcagattgt tgatcagctc cgcccgggac
     2161 gcaccgagat cgtcggcgcg tcccggcgtc gcgaggagac cgcccgccac gatcgtcgcg
     2221 gccatcaagc agaagcggcg tgggtgcatg tgcgttctca ccacttcttc tgggcgccgg
     2281 gtcgtgccgg gggaacgtcc ttctgttcgt tttccgtgaa tggcgacccg aaatagggga
     2341 agtcccggcg cgttcggtgt gggtccgggg cgacaccatc ggcgagggcc gagtttgacg
     2401 cgagcgtcag gatcacgtcc atcacgtcat cggtcagtgc gcgtccattg aagtcggcaa
     2461 aatcgaaggc ggccggcgtg tccaactcat aaggcagcat cgtggggaag agcctcgccg
     2521 tcatctgccg agcatattcc gagggattag ccgccgaacc ggacaaggtc gtgattttct
     2581 cggccacgcc gccgacctgt gcgataaagg atgactgatc gtctgccggg gtggaacggt
     2641 tgaacttctc cttcatgtcg gcgtccggca tgaagacatt cgtcaccagc ggcagacccc
     2701 accgggagac ctgcatctcc ggcgcgtgtc catacatgga ggccgtggcc caggcccgta
     2761 ccggaccgtg accgatgagc cgactgggaa gctccaccac gatggcggtg acattacgcc
     2821 gggcgaagaa attccggtgg ttccggaatg ccagcggatc gaagcggttg tccttgaaca
     2881 gggcggtacg gaacacgccc aacgccgcgg catcccccgc aaacaggtcg ggagcgaggc
     2941 cggcataaag cttcactccc gaacgggctt cgatcacctc gcccgtgtgg cctttcgcca
     3001 gtagctcacc ctctgccccg agtcgcgctg cgttgccgtc ggctctacga agctcgacga
     3061 tttgaacgtg cctgtgttct tcggcatcag catgctcaac cggcccgaag cgaagcttga
     3121 acgtcacctc ctcgtgcaga tcgtggttga gatcgaatcg aaaggcgtag agtccttcgt
     3181 catgaaaggt ttctgggccg gatatgccgg cgtccgggtt caccgtcatc gccatcacgg
     3241 tgtgaccggg cgaaccctgg aacagataca ggtcgcagac attcacgcga gggtccttca
     3301 gcacggtcgg cgtgtcgaag tgatgagaca tggtggaacc tcaggacatc gatgaagcga
     3361 aggtgccgat gcgccccgcc agcagggtct tcgtaacgga tgaaacgtca tccgcgggat
     3421 ggtgcccgtt gcggctcgca aaactgaagc ccgtgggacg gtcgggatag aaccggatga
     3481 cgtcgggcaa cagcacggcg gccaggcgcc ttccgtaggc ccgcgcatcg gcggcacacc
     3541 agccgtacag ggactgagct atgtggtcgg agactacgcc agcgaagcgt gaccggtcgt
     3601 cggccggcga cgaggtgtgg tagacgccag ccatctccgg gaacgccgca agataagcgg
     3661 cgaacagagg acttccgacc cgtgtccgtg ctccatccgg atgccgcagt tcggcccaga
     3721 cgtgcaattc ttcaccgtgg ggaaaggcat cctggcgtgc ttccacgaga gacgccctgc
     3781 gacggggctg gtcccccgcg cgcggccagg cgacggtgcc ggagaacaag cgcgaatcac
     3841 tgccccgctc gttttgacca tcgcgaatca gccaggaccg agaacccgca tggatgaccg
     3901 tgtcgaaacg cttctgaagc ggcccgagca cggcgaaaat cagcctgtcg tcgggcggcg
     3961 aacggaagac aaacaactgg gtttgggata atgtggctcg tgccacgggc ctgtcccagg
     4021 tgggcacgtg cgtgggcggc agagccgaaa gacctgccgc gccgcacaag agcgatctcc
     4081 gcgacattat tgatatcatc gccttctcct ctatcaagct atcgcgagcg tccgggtcgg
     4141 cgctagatga tctaagaagg aacggggcag ggtcgctaat actttctctg catcgtatcg
     4201 atgttctgga acgaacttat aacgacctgc caacacgcga agctgtcggc gggcggcctg
     4261 gcggatgata cgccgggccg ggccgccgct aaggacttta tcgtcgcaca agtcgagcgg
     4321 cttcactggc ggatctgaaa cggccaggcg aagaatgccc atgttaccac cgatcgaatt
     4381 cgcgcggtga tgcacgtctt caaaagcgcg gccagacgcc gcggcgcgga cgcccgataa
     4441 ggttacaggc gcgccgtttt tcaggagcga aggttcgatg acggcgggat tgaacggcaa
     4501 ccgtctcata tcataccaac cggcgttgat gcagactctt cggttgaccc cgtccgtcat
     4561 gccggcgcat gctggtatcc acgcctttta cgagcggaaa caaaggcatg gatggcaagc
     4621 ctgcgctcgc catgacggtt gcacggcgct gccgatgggt caacatcaat gccggttggt
     4681 atcagtcagt gcgacggctt ggcgaggccc accttgatga tcgtatcgtc tgcaacatcc
     4741 gtggtgccgg cgggcgagaa cgtcgggagc tgccggagtt gcctgggtgt gaaggcaacg
     4801 atctccatgt cctggccaag caacaccatc gcatccacgg gcaccgcgat cggccgggct
     4861 ccgaaaccca ggaacccgcc gaaatccacc acgaccatga tctggccact gccgtcgcgc
     4921 acaaggcggc gaacccgccc gagaacgtcc tggctctcca ccggacgaag cacctccctg
     4981 ccgatcagat cgccaacgcg caccggctgc gggaaccgca tggccgtgga gtccgcaagg
     5041 ctcatcccgg tgggaggcgg catgcccccc ggtgtcttgc tctgtgcaaa agccacgctc
     5101 gc
//
LOCUS       DATAVD010001168         5382 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2344059, whole genome shotgun sequence.
ACCESSION   DATAVD010001168 DATAVD010000000
VERSION     DATAVD010001168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5382
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2344059"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..492
                     /locus_tag="VHX39_22250"
     CDS             118..492
                     /locus_tag="VHX39_22250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993902.1"
                     /translation="MHDPLRERAPSGRQKAGPKRAAGWLLQRTSPEHISAPAVSTSQA
                     VVLHFPPQAPGPQIGHNGGPLLTPDDPNESWRNYCWRRAHKAAWKTPPPEIALRRLGR
                     AEALGMTYREYTLEILERGRHL"
     gene            613..2163
                     /locus_tag="VHX39_22255"
     CDS             613..2163
                     /locus_tag="VHX39_22255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993903.1"
                     /translation="MRTSVVVATLVVLGLAAGGAYYGLEVYPQQQFRAGLDQALATLP
                     PGTTASYQTAHYSLLSHEAVVTGLTVHGEIAGNPPLPFDVTAATITTEQPNLGFGDSW
                     AHAVAAPATFGPDAALLIAASSTMTGLTVHSAVLNLTEDSVHITNPHIYPWALLHNGM
                     PSWKDLQAALTPHQGPPDPVALQKILRAEAAIVMGIGYDLYEAGPAKATEALPGIDFA
                     YEVRKVAGDGFDRGILKGGSAEGFAVRGSQIGTISVDHVTIGAMDVRSPMTRIINGEA
                     LSIGLLDGIKIGRFDYSGITAQLPDHPTAHIGGVSLGPVAFANGVPVAGQIGWTDVTV
                     AREQMTDPRAQEAFDKLGLQTATISFALAYDWDIGKQHLSVHDTMLKINELGTLTLAA
                     DLTNAIPSPVGLAQVRLAHTRLRFDDASLVDRAIRAGAAQAGTDPAAYRQQIVEMVRQ
                     QGHTQGVVSPALTAACNAAGDFIASPHSITVELAPAQPVPIMALKGMNGSPATLASTL
                     GLVVSTTQ"
     gene            complement(2181..3764)
                     /locus_tag="VHX39_22260"
     CDS             complement(2181..3764)
                     /locus_tag="VHX39_22260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3993904.1"
                     /translation="MQRRTFLAASAVALAAPHVARSQNNRLLKFVPQSDVAVLDPIWT
                     TAYVTRNHGYLIFDTLFGTDGTFKANPQMAEGMTADNDGKLVRITLRDGLKFHDGTPV
                     LARDCVASIRRWSKRDTFGGTLMAATDELTATDDKTIQFRLSRPFPLLPDALGKSPTN
                     FPAMMPDRLAQTDPFTQVTEMVGSGPYKFNAKERVPGSLLVYERFADYVPRANGVADW
                     TAGPKVAHFDRVEWHVIPDASTAMAALQTGEVDWWENPTNDMLPILRKTAAVKAVIQD
                     PTGLMACMRLNHLTAPFNNPAIRRALLKAIDQRDFCLACAGDDPAMWHVPTGVFYPAG
                     PFATIAGLEVFAGKRDYDAVRKEIVAAGYNGEKTAILAPTDFPLLKAQADVCADVFQK
                     IGLNVDYQAMDWGSVVQRRTKKDPVEKGGWSVFNTFWSGLDQLNPVGHVFLRGMGEAA
                     GAAPGWPSSPRIEALRQQWLEAPDLAAQQALARDLQLQALIDVPYVPLGQVLTATAYR
                     SNLTGVLNGFVLFWNVRKS"
     gene            complement(3780..4121)
                     /locus_tag="VHX39_22265"
     CDS             complement(3780..4121)
                     /locus_tag="VHX39_22265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993905.1"
                     /translation="MAIVVTLLISTGEPDPTWTLTPDQERDFLAKLAASPVPALSVGP
                     PGRRPGYAGLMARDGSGERWVVYRGWIRGGANSRVDDKRVLELWLLETGRHAITPKLF
                     SELSRQMAPPA"
     gene            complement(4271..4681)
                     /locus_tag="VHX39_22270"
     CDS             complement(4271..4681)
                     /locus_tag="VHX39_22270"
                     /inference="COORDINATES: protein motif:HMM:NF025444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4259 domain-containing protein"
                     /protein_id="HEX3993906.1"
                     /translation="MGTWGAGTLDNDTAVDWMYGLGEVGDLSLIEGTLDRALAVGGEY
                     LEAPDAEEALAAAEAVARMLGNFGVRNDYTETMDAWVTYMNRLPPEELVAKAQRIVAR
                     IQQSPSELLQRWSESDKSEVWSRSLADLTRRLGA"
     gene            4826..>5382
                     /locus_tag="VHX39_22275"
     CDS             4826..>5382
                     /locus_tag="VHX39_22275"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3993907.1"
                     /translation="MANAFDVVIRGGTVMDGNGGTPFEADVAVKDGKIAAIGSIAGSG
                     TDEVDARGLSVTPGFVDIHTHYDGQAMWDSHLAPSSWHGVTTVVMGNCGVGFAPVRHD
                     TQDKVVALMEGVEDLPGPCLNEGLDWTWESFAEYLTALERRPHDIDFCALLPHAPMRV
                     YVMGDRAMALEDANQEDIARMREITA"
BASE COUNT         1031 a         1692 c         1672 g          987 t
ORIGIN      
        1 gttccgtgcg gaggtttccc gccaggatgg cctcggtatt ctgggtttcc atgatagtgg
       61 acatagcgtc aatatagtgg aatcattctc ggaggagcaa gcaagcagga ggaggccatg
      121 catgatccgc tgcgcgagcg agcgccgtcc ggcagacaaa aggctggacc gaagcgggct
      181 gcgggatggt tgctgcagcg cacaagccct gagcacatca gcgcaccggc tgtctcaacg
      241 tcgcaagcgg ttgttctgca cttcccgccg caagcgcctg ggccgcagat cggccacaac
      301 ggcggtcccc tgctcacacc cgatgatcca aacgaaagtt ggcggaacta ttgctggcgg
      361 cgggcgcaca aagccgcgtg gaaaaccccg ccgccggaga tcgcattgcg gcggcttgga
      421 cgagccgaag cgttgggcat gacctacagg gaatatacgc tggaaatcct cgagcgcggc
      481 aggcatctgt aactaccagc cgggcgcgtt gctgaaaccg ccggaaaatg caaactccgc
      541 gaaaatcttc gcgtgcgaaa tgatataggc gatcgtctct cagccagcac ctgccaccaa
      601 aggaaccttt cgatgcgcac atcggtcgtg gtcgcgactc tggtggtact gggcctcgcc
      661 gccggcggag catattacgg acttgaggtg tatccgcagc agcaattccg cgccgggctc
      721 gatcaggccc tggcgacgct gccgcccggc acgaccgcaa gctaccaaac cgcgcattac
      781 tcgctgctgt cgcacgaggc cgtggtcacc ggactgaccg tgcacggcga aatcgccgga
      841 aacccgccgc ttccgttcga tgtcacggcg gccaccatca cgaccgagca gcccaatctg
      901 ggatttggcg attcctgggc gcatgccgtg gccgcgccgg caaccttcgg tccggatgca
      961 gcgctgctga tcgccgcatc gtcgacgatg accggcctga ccgtccactc cgcagtgctc
     1021 aacctcaccg aggattccgt ccacatcacc aacccacaca tttatccctg ggctttgctg
     1081 cataacggca tgccctcctg gaaggacctg caagcggccc tgacgcccca ccaagggccg
     1141 ccggaccctg ttgccctgca gaagattttg cgagccgaag ccgcgattgt gatggggatc
     1201 ggttacgacc tttatgaagc gggtcccgcc aaggccaccg aagcgttgcc cgggatcgat
     1261 ttcgcatatg aagtccgcaa ggtggccggc gacgggttcg atcgcgggat actgaaaggt
     1321 ggatccgcgg aaggcttcgc agtccgcggc agtcaaatcg gcacgatttc cgtcgaccac
     1381 gttacgattg gcgcaatgga tgtccgctcg ccgatgacaa ggattatcaa tggcgaggca
     1441 ctgtccatcg ggttgctgga cgggattaaa atcggccgct tcgactatag cggcatcacg
     1501 gcacaactgc ccgatcatcc gacggcgcat atcggcggcg tctcattggg tccggtggca
     1561 ttcgccaacg gcgtgccggt cgcgggacaa atcggttgga cggacgtcac cgtggcacga
     1621 gagcagatga ccgatcctcg cgcgcaagag gcgttcgaca aacttggcct gcagacggcg
     1681 accataagct ttgcgctggc ctatgactgg gacatcggca agcaacatct gtcggttcac
     1741 gatacgatgc tgaagatcaa cgagcttggt acgctgaccc ttgccgccga tctgaccaac
     1801 gcaatcccga gcccggtcgg tttggcgcag gtgcgcctgg cccataccag gctgcggttc
     1861 gatgacgcgt ccctggtaga ccgggcgata cgtgccgggg cggcgcaggc cgggaccgat
     1921 ccagcggctt atcggcagca gatcgtcgaa atggtgcgac aacagggcca cacgcaaggt
     1981 gtcgtaagtc cggccttgac cgcggcttgc aatgccgccg gagatttcat tgcctcgccg
     2041 cattcgatca cggtcgagct ggcaccagcg cagcccgtcc cgatcatggc gctgaaggga
     2101 atgaatgggt ctcccgccac gttggccagc acgctggggc tggtggtttc tacgacgcaa
     2161 tgaatgcgtg gcagccgggt tcaactcttg cgcacgttcc agaacagcac gaacccgttc
     2221 aacacaccgg tcaggttgct gcgataggca gtcgccgtca gcacctggcc cagaggtaca
     2281 tacggcacat cgatcagcgc ctgtaattgc agatcacgcg ccagcgcctg ctgcgccgcc
     2341 aggtcaggcg cctcgagcca ttgttgccgc aacgcctcga tacgcgggct ggagggccaa
     2401 ccgggcgcgg cacccgcggc ctcacccatc ccgcgcagga acacatgacc gacgggattg
     2461 agttgatcca ggccgctcca gaacgtgtta aacacactcc agccgccctt ctcgaccggg
     2521 tcctttttgg tgcgccgctg caccacgctg ccccagtcca ttgcctgata gtcgacattg
     2581 agaccgatct tctggaacac gtcggcacaa acatcggcct gcgccttcag caacgggaag
     2641 tcagtgggcg ccaggatggc ggtcttttcg ccattgtagc cggcggcgac gatttccttg
     2701 cgcacggcat cgtaatctcg tttgccggca aatacttcaa ggccggcaat ggttgcgaat
     2761 ggaccagcgg ggtaaaacac gccggttggc acgtgccaca tcgccgggtc gtcgccggca
     2821 caggcgaggc agaaatcgcg ttggtcgatg gctttcagca aagcgcgccg gatggccggg
     2881 ttgttgaatg gtgccgtcag atgattgagc cgcatgcagg ccatcagccc ggtcggatcc
     2941 tggatcaccg ccttgacggc ggcggtcttg cgtaaaatcg gcagcatgtc gttggtcgga
     3001 ttttcccacc aatcgacttc gccggtttgc agcgcggcca tggcggtgct cgcgtcggga
     3061 atgacgtgcc actcgacccg gtcgaaatgc gcgactttcg gaccggcggt ccagtcggcg
     3121 actccattcg cgcgtggcac ataatcggcg aagcgttcgt agaccagtag ggagcccggc
     3181 acccgctcct tcgcattgaa cttgtaagga ccgctgccga ccatctctgt cacctgagtg
     3241 aacggatcgg tttgcgccag ccggtcgggc atcatggcgg ggaaattggt gggggatttg
     3301 cccagtgcgt cgggcaacaa gggaaaggga cggctgaggc ggaactggat ggtcttgtcg
     3361 tcggtagccg taagttcgtc ggtggctgcc atcagagtgc cgccaaaagt gtctcgtttc
     3421 gaccaacgcc ggatgctggc gacacagtcc cgcgcgagca ccggtgtgcc gtcgtgaaac
     3481 ttcagaccat cgcgcaaggt aatgcgtacc agcttgccgt cattgtccgc ggtcatgcct
     3541 tcggccatct gcgggttcgc cttgaacgtg ccatcggtgc cgaacagggt atcgaaaatc
     3601 aaatacccgt gattgcgggt cacataagcc gtggtccaga tcggatccaa caccgccaca
     3661 tcgctttgcg ggacgaattt gagtagccga ttgttctgtg aacgtgcaac gtgcggcgcg
     3721 gccagcgcaa cggccgaagc cgccagaaat gtgcgtcgtt gcatcgtgcc gggatccctt
     3781 caggcgggcg gtgccatttg ccggctcagt tcggagaaca acttcggcgt aatggcgtgg
     3841 cgtccggttt ccaacagcca cagttcaagc acgcgtttat cgtcgactcg ggaattggca
     3901 ccgccgcgga tccagccgcg gtaaaccacc cagcgttcgc cggagccgtc gcgcgccatc
     3961 agcccggcgt aacccggccg tcgcccaggc gggccgactg acagggcggg caccggcgaa
     4021 gccgccagct tcgccaggaa gtcccgttcc tggtccgggg tcagtgtcca tgttggatct
     4081 ggttcaccgg tggatatcag cagtgtgacg acgatggcca tgtcgtgtgc tccgttgcgc
     4141 gggccggcac ggtcctttta gcaccgtcga ggactccttg cacggtaaac gcgggaattc
     4201 accaaacggt tactgcgacg gcaggttatg ccgttgatga accgcaacat ggcgcgcggt
     4261 gcgtcatcgt tcacgctcca agccggcgcg tcagatcggc gagcgatcgc gaccacacct
     4321 ctgatttgtc actttccgac caacgttgca acagttccga cggcgactgc tggatacggg
     4381 ccacgatccg ctgcgccttg gccaccagtt cctccggcgg cagcctgttc atataggtca
     4441 cccaggcgtc catcgtctca gtgtaatcgt tgcgcacacc aaagtttccg agcatgcgcg
     4501 cgacggcttc cgcggcggcg agcgcttcct cggcgtcggg cgcctcgaga tattcgccac
     4561 caaccgcgag tgcccggtca agggtgccct cgatcaagga cagatcgccc acttcgccca
     4621 ggccgtacat ccagtcgacg gctgtgtcgt tgtccagtgt gccggcgccc caggtaccca
     4681 tcctgctctc ccgtttcgat cacggatcca attccgttgc attcagccac atgcgcggtt
     4741 cacgagtcca gatcggacgg gagcaggctt gctcggtcgg taggaacggt agatactgct
     4801 accaaccagt agaaaggcag agtccatggc caacgcattc gacgtcgtca ttcgcggcgg
     4861 aactgttatg gacggcaatg gcggaacgcc gttcgaggcc gacgtcgccg tcaaggacgg
     4921 caagatcgca gcaattggca gcatcgccgg ctccggtact gacgaggtcg acgcgcgcgg
     4981 cctgtccgtt acgcccggct tcgtcgatat ccacacacac tacgatggcc aggcgatgtg
     5041 ggactctcac ctcgcacctt catcgtggca cggcgtcacc acggtcgtca tgggcaattg
     5101 cggcgtaggc ttcgcgccgg tgcgccacga cacccaggac aaagtcgttg ccctgatgga
     5161 aggtgtcgag gatctgccgg gcccctgcct caacgaaggc ctggactgga cctgggaatc
     5221 gttcgccgaa tatctgaccg cgctggaacg ccggccgcac gacatcgatt tctgcgcctt
     5281 gctgccgcac gcgccgatgc gggtctacgt catgggcgac cgcgccatgg cgctggagga
     5341 cgcgaaccag gaagacatcg cccgcatgcg ggaaatcacc gc
//
LOCUS       DATAVD010001169         5373 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1787529, whole genome shotgun sequence.
ACCESSION   DATAVD010001169 DATAVD010000000
VERSION     DATAVD010001169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5373
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1787529"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..485)
                     /locus_tag="VHX39_22280"
     CDS             complement(<1..485)
                     /locus_tag="VHX39_22280"
                     /inference="COORDINATES: protein motif:HMM:NF013383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX3993908.1"
                     /translation="MSDIAVLGAGAWGIALAIQAVRAGNNVVLWSRSGADRIAETRQS
                     PRLPGFALPEQVRVTADIELLSGMAIAAVPTQALRAVLAAATHVREIVICAKGIETGT
                     LRLPLEIAAEVRPEAIGAVLTGPNFAFEIASGQPAAAVVASLDQPLREAVMTRMATPA
                     FR"
     gene            complement(478..1287)
                     /gene="rlmJ"
                     /locus_tag="VHX39_22285"
     CDS             complement(478..1287)
                     /gene="rlmJ"
                     /locus_tag="VHX39_22285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HEX3993909.1"
                     /translation="MNYRHAFHAGNFGDCMKHALLVALLRELQKKPAPLFVLDTHAGA
                     GHYDLAAAAAQRTNEAANGIFRLLDHVPPALEDYVATVQRLGLYPGSPELIRSLLRVD
                     DRLACCEVHPEDYASLRRLFHSDRQVAVHQRDAWQALKALLPPAQKRGLVLIDPPYEE
                     PGEFARVADGLTLAQSRFPNAVLAAWYPVKHRAPMRALFDTLALRDVIAAELLLREPL
                     DPTQLNGCGLLIVNPPYRFEAEAQSVLTALLERLGDRAPGAAALVTRLADE"
     gene            complement(1284..2399)
                     /gene="tsaD"
                     /locus_tag="VHX39_22290"
     CDS             complement(1284..2399)
                     /gene="tsaD"
                     /locus_tag="VHX39_22290"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEX3993910.1"
                     /translation="MPTLVNSTPSGPVRGPILGIESSCDETAAAVLDADGRILAEAVL
                     SQQRDHAPFGGVVPEIAARSHLAHLPGLVRDVTARAGVELGALAAVAATAGPGLIGGL
                     IVGSQFAKGIAIALGLPYIAVNHLEAHALTARLPELASRPDEASANTDGVAFPYLLLL
                     VSGGHCQCVAVEDVGRYRRLGSTVDDAAGEAFDKVGKLLGLGWPGGPALERLAANGDP
                     SRYAFPRPMLGRQGCDFSFSGLKTAVAQTVARLPSGALPARMAADLAAGFQAAVADVL
                     ADRALHAMRMMQGAASLLVVSGGVAANQAIRAALARAAATQGFRLLAPPTRLCTDNAV
                     MVAWAGLERLRLGLVDGIDFAPRPRWPLEALSPREEP"
     gene            2573..3586
                     /gene="hemC"
                     /locus_tag="VHX39_22295"
     CDS             2573..3586
                     /gene="hemC"
                     /locus_tag="VHX39_22295"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003618174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEX3993911.1"
                     /translation="MSRGRAASVQKDHQPMSMRPHSRSLPLRVGTRGSPLALVQTRFF
                     LELLTTFCPVLRGMSVFEEHAIRTTGDRVQDRPLADIGGKGLFAKEIHEALADGRVDF
                     AVHSLKDLETELPAGIVLACTLKREDARDALILGPGCGEPDPGAPFECLPAGAVVGTS
                     SVRRQAQLLHARPDLTITGIRGNVETRLAKVAKGECAASLLALAGLKRLGLADKASVV
                     LDPDAMVPSAGQGIVGVTVRESDTELREMLAAIEDPEAKAVSTAERAMLAELDGSCRT
                     PIGGHARLLPNGELHLTGLVARADGSFLLKRAAHGAAADAVRIGADLGASLRVDCPRD
                     VFG"
     gene            complement(3732..>5373)
                     /locus_tag="VHX39_22300"
     CDS             complement(3732..>5373)
                     /locus_tag="VHX39_22300"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX3993912.1"
                     /translation="SPWSDGQHLERPHIERPHIEHWEMSDAVLSSTLPSSGSRKALNP
                     WVVAAVVVVPTFMEVLDTTIAVVALRYIAGGLSATVDDGEWVITSYLAANAIILPITG
                     WLIAHLGRRNYFLLSIAVFTLASGMCGMATSLGQLILFRVLQGLAGGGLQPSSQGVLL
                     DAFPAERQGMAMTLFGLAALIAPVVGPTLGGWITDSYSWRWVFLINIPVGLLAFIACS
                     ITLRDPDYLTARRTELRKQPFSFDGIGLSLLVIVIVCWEVMLSKGQEWDWLGDPFWRV
                     QTLVILFVVGLPALVFWELRHPSPVVNFRPLRERNFAACCVIIFCAFAVLYAASTSLP
                     ALLQSLFGYDALSAGLVMSPAGFFALITMPFVGRALGRGTDARWVLAVGLLTMAAGNY
                     WMSQYNLDVSPGQLVWPRVVLIIGLAMCFAPANVAAYLYTPLALRGAAVGLLSLLRNE
                     GGSVGTSMAQTIQERRDQFHSLRLGESLDPFNPAVRSFIGQTSGQFLQQSGDPVAAQQ
                     MALQALANLREQQASSLAYFDVFWVLAVSWSRLCSPCC"
BASE COUNT         1038 a         1768 c         1730 g          837 t
ORIGIN      
        1 cggaatgcgg gcgtggccat tcgtgtcatc accgcctcgc gaagcggctg atccaggctg
       61 gccacaacgg cggcggcggg ttgcccggac gcgatttcaa atgcgaaatt ggggccggtc
      121 agcacggcgc caatggcttc gggccgtacc tcggcagcga tttccagcgg cagacgtaat
      181 gttccggtct cgatcccttt tgcgcaaatc acgatttctc gtacatgggt tgccgctgcc
      241 agtacagcgc gcaacgcctg cgtcggcaca gccgcaatcg ccatgccgga cagcaattca
      301 atatcggcgg tgacgcgcac ctgctccggc agagcaaagc ccggcaggcg cggcgactgt
      361 ctcgtctcgg cgatgcggtc agccccgctg cgcgaccata gcacgacgtt gttgccggcg
      421 cggaccgcct ggatcgccag agcgatgccc caggcgccgg cgccaaggac cgcgatgtca
      481 ctcatcggcc aaccgcgtaa ccaaggccgc cgctccgggc gcgcggtcac cgaggcgctc
      541 caacaacgca gtcagcacgg actgcgcctc cgcttcgaag cggtacggcg gattgacgat
      601 caacagaccg cagccgttca actgcgtcgg gtcaagcggt tcgcgcagca gcagctcggc
      661 ggcgatcaca tcgcgcaacg ccagcgtatc gaacaatgcc cgcatcggcg cacggtgctt
      721 caccggatac cacgctgcga gcacagcgtt gggaaaacgg ctctgcgcca atgtcaggcc
      781 gtcggcgacg cgggcaaatt ctccgggctc ttcgtacggc ggatcgatca acacgaggcc
      841 gcgcttttgc gctggtggca gcagggcctt cagcgcctgc catgcatcgc gctggtgcac
      901 cgcgacctgg cgatcgctgt ggaacaaccg acgcaatgag gcataatcct cggggtgcac
      961 ttcacagcag gccagacgat cgtccacccg caacaatgac cggatcagtt ccggcgagcc
     1021 gggatacaaa cccaggcgtt ggaccgtcgc cacgtagtct tccaacgcgg gcggtacgtg
     1081 atccagcaga cggaaaatgc cgttcgcagc ctcattggtg cgttgcgctg ctgcagcggc
     1141 cagatcgtaa tggccggcgc cggcatgggt atccagcacg aacagcggtg ccggcttctt
     1201 ctgcaattcg cgcaacagcg caaccagcaa cgcatgcttc atgcagtcgc caaaattccc
     1261 cgcatgaaac gcgtgccggt aattcacggc tcctcccgcg gggaaagcgc ctccagcggc
     1321 cagcgtggcc gcggtgcaaa atcgatcccg tccaccagcc cgagccgtag gcgttccaac
     1381 ccagcccatg ccaccatgac agcgttgtcc gtgcagagcc gggtcggcgg agccagcaat
     1441 cggaaccctt gagttgccgc ggcacgcgcc agggcagcgc ggatcgcctg gttggcagcc
     1501 actcctcccg agacaaccag cagcgaggcg gcgccttgca tcatacgcat cgcatgcaac
     1561 gcgcgatccg ccagtacgtc ggccactgcc gcctggaacc ccgcggccag gtccgctgcc
     1621 atccgggccg gcaacgcacc ggacggcagc cgcgccacgg tttgtgccac cgccgttttc
     1681 agcccggaga aactgaagtc gcagccctgg cgtcccaaca ttggccgcgg aaacgcgtac
     1741 cggctcgggt ccccgttcgc cgccagccgt tccagcgccg gtccgccggg ccacccaagg
     1801 ccgagcagct tgccgacttt gtcgaacgcc tcgcccgccg cgtcatcgac agtagagccg
     1861 agccggcggt agcggccaac atcctcgacc gcaacgcatt ggcaatgacc gccggacacc
     1921 agcaacaaaa gataagggaa cgcaacgcca tccgtgttcg cgctagcctc gtccggcctg
     1981 ctggccagct caggcaggcg ggcggtcagc gcgtgcgcct caaggtggtt gaccgcgata
     2041 tagggcagcc caagcgcgat cgcgatcccc ttggcaaact ggctccccac aatcagaccg
     2101 ccgatcaacc ctgggccagc ggtggctgcg acggccgcca gggcacccag ctccacacct
     2161 gcccgagccg tcacatcgcg caccagccca ggcaggtgag ccaggtggga gcgggcggcg
     2221 atttccggaa ccacgccgcc aaagggggca tggtctcgtt gctgcgacag tacagcttcc
     2281 gccaggatcc ggccgtccgc gtccagcacg gccgccgcgg tttcgtcgca agacgactcg
     2341 atccccagga tggggccgcg gactgggccg gaaggggtac tgttaaccaa agttggcatg
     2401 ttgtcctcaa cacaccgtgc taatacgacg gctcgatgca agccgccacg catctggtct
     2461 caaattgggc agtctgtggt cctgacccca tcccgacacc gcgttttcga cccgcccgag
     2521 gcacgttccg gttgatccag agcaatgccg tgtccaaatg tttcgccgat agattagcag
     2581 ggggcgggcc gcgtccgtcc aaaaggatca ccaacctatg agtatgcggc cacattcccg
     2641 atctctgccg ctgcgggtcg ggacccgtgg ctcgccgctg gcattggtgc agacgcgttt
     2701 ctttctcgaa ctgttgacca cattctgccc ggtactgcgg ggcatgagcg tgttcgagga
     2761 acatgccatt cgcaccacag gcgatcgggt gcaggaccgg ccgctcgccg acatcggcgg
     2821 caaggggttg ttcgcgaagg agatccacga ggctctggcc gacggcaggg tggattttgc
     2881 cgtgcacagc ctgaaggacc tggaaaccga gttgcccgcc gggatcgtgc tcgcctgcac
     2941 actgaaacga gaggacgcca gggacgcgct aatcctcggt ccgggatgcg gggagcctga
     3001 tccgggggcg ccgttcgagt gtttgccggc cggggcggtg gtcggcacct cctcggtgcg
     3061 gcgtcaggcg cagctgctgc acgcgcggcc ggatctgacc atcaccggca ttcgcggcaa
     3121 tgtggagacg cggctggcca aggtggcgaa gggcgaatgc gctgcctcgc tgttggcgct
     3181 ggccgggttg aagcggcttg gtctggcgga caaggcgtcg gtcgtactgg accccgatgc
     3241 gatggtgcct tccgccggcc agggcatcgt tggcgttacg gtgcgggaga gcgacaccga
     3301 actgcgtgaa atgctcgccg cgatcgagga tccggaagca aaggccgtgt cgaccgccga
     3361 acgggcgatg ctggccgagc tggacgggtc ttgccgcacg ccgatcggcg gccacgctcg
     3421 gctgctgccg aatggggagc tgcatttgac cgggctggtt gcgcgcgcgg atggctcgtt
     3481 cttgctgaag cgcgccgcgc acggagcggc tgccgacgcc gtccgaattg gcgccgatct
     3541 gggcgccagc ctgcgggtgg actgtccgag ggatgtattt ggctgatggg gacgtctccg
     3601 gcggacgacc aggcctttat cgaattgccg tcctggcgtt gaggacgcgg accgcctcac
     3661 gatggccagt cgcgcgtgct cgcattactc ggatccgatg tgagcgccct tctctgcgac
     3721 ggagcgtctc atcagcagca cggcgaacac aagcgcgacc atgacacggc cagcacccaa
     3781 aacacatcga agtaggcgag tgacgatgcc tgttgctcac gcagattcgc gagcgcctgc
     3841 aaggccattt gctgcgcggc gaccggatcg ccgctctgct gcaggaactg tccggacgtc
     3901 tgaccaatga aagaacgtac ggccgggttg aaaggatcca gcgactcacc gagacggagg
     3961 ctgtggaact ggtcacggcg ctcctgaatc gtctgcgcca tggaggtccc gacgctgccg
     4021 ccctcgttgc gcaacaggct caacaggccg actgccgctc cgcggagtgc gagcggcgta
     4081 taaaggtaag ccgccacgtt cgccggggcg aagcacatcg ccagcccgat gatcagcacc
     4141 acacgcggcc agaccaactg ccccggactc acgtccaggt tatactgcga catccagtaa
     4201 ttcccggcgg ccatggtcaa caggcccacg gcaagcaccc accgcgcatc ggttcctcga
     4261 ccaagcgcac gacccacgaa tggcatggtg atgagggcaa agaagccggc cggcgacatg
     4321 acgagtccgg cgctcagtgc atcatagccg aacagtgatt gaagtaaggc cggcaacgaa
     4381 gtgctggcag catacaacac tgcgaaggcg cagaagatga tgacgcagca ggctgcaaag
     4441 ttccgttccc gcaacggtcg gaagttgacc accggacttg gatgccgcaa ttcccaaaag
     4501 accagcgcgg gcaggccgac gacgaacaag attaccagcg tctgtacgcg ccagaacggg
     4561 tcgcccagcc aatcccattc ctgacccttg ctgagcatca cctcccaaca gacgatgacg
     4621 atgaccagca acgacaggcc aatcccgtca aagctgaacg gttgtttccg caactcggtg
     4681 cgccgtgccg tgaggtaatc ggggtcccgg agtgtgatgg aacaggcaat aaacgccagc
     4741 aggccgacgg gaatgttgat caggaacacc caccgccagg agtagctgtc ggtgatccag
     4801 ccgccaagcg tcgggccgac aacaggcgcg atcagcgcgg ccaggccgaa caaggtcatg
     4861 gccatgcctt gccgctcggc ggggaaggcg tccagcagca cgccctggct cgaaggttgc
     4921 agaccaccgc cggcgagacc ctgcaacacg cggaacagga tcagttgacc gagactcgtt
     4981 gccatgccgc acatccccga ggcgagggtg aatacggcga tggaaagcag gaaatagttg
     5041 cggcgcccga gatgcgcgat cagccagccg gtgatcggca ggatgatcgc gttggcggca
     5101 aggtagctcg tgataaccca ttcgccgtca tcgaccgtgg ccgacagccc gcctgcgata
     5161 tagcgcaacg ccacgacggc tatcgtggtg tcgagcactt ccatgaacgt cggcaccaca
     5221 acaaccgcgg cgacgaccca tgggttcagt gccttgcgcg atccggaact cgggagtgtc
     5281 gacgacagta ccgcgtcgct catttcccaa tgctcgatgt gggggcgctc gatgtggggg
     5341 cgctcgaggt gctggccgtc ggaccagggg ctg
//
LOCUS       DATAVD010001170         2062 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_298149, whole genome shotgun sequence.
ACCESSION   DATAVD010001170 DATAVD010000000
VERSION     DATAVD010001170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298149"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..861)
                     /locus_tag="VHX39_22305"
     CDS             complement(<1..861)
                     /locus_tag="VHX39_22305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3993913.1"
                     /translation="MTTAGKTTPDKWQFWIDRGGTFTDIVARAPDGTLSTHKLLSENP
                     GRYRDAALAGIRAVLGLKPDQPIPSGRIDAVKMGTTVATNALLERKGDRTLLIVNRGF
                     ADALRIGNQARPRLFDLAITLPSMLYERVEEIGGRVDVHGAEVETLDETAAQAAFAAA
                     VADGIRACAIVLLHAWKYPAHEHRLAELARAAGMTQVSASHAVSPLLRLVPRGDTTVV
                     DAYLSPILRRYVDQVAGELQDTRLYFMQSNGGLAEAGGFQGKDAILSGPAGGIVGAAR
                     TAEMAGLTQII"
     gene            927..>2062
                     /locus_tag="VHX39_22310"
     CDS             927..>2062
                     /locus_tag="VHX39_22310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX3993914.1"
                     /translation="MSLPNTTLAAAYEAMTPGSARLTERARGLFPSGLTHDSRHFDPY
                     PIYVTHGQGPMKWDVDGNRYVDYFGGHGALILGHGNAAVQQAVHEAYDRGSHFGACHE
                     AEIRWAELVTQMVPSAERVRFTNSGTEATLMALRLARAFTGRRKIVHFRGHFHGWHDH
                     LSNGYSNHFDGTPTTGVLAGIADNVLMADPNDVTGIDRLFSDHKDIAAVILEPTGASF
                     GKMPIVPTFLQHLRDLTKQAGTILIFDEVVTGFRVSPGGLQKIVGVTPDMTTLAKILA
                     GGLPGGAVAGRKDILDLLDFDVTKALGKEKIGHQGTFNANPVSAAAGIATLEILATTD
                     ACERANEYGATVRSRMNEVLEDEQVKWAVYGTYSGMHIFTNPDG"
BASE COUNT          400 a          622 c          662 g          378 t
ORIGIN      
        1 gatgatttgg gtcaggcctg ccatctccgc tgtgcgggca gcgccgacga tcccgcctgc
       61 tggcccggac aggatcgcgt ccttgccctg aaatccgccg gcctcggcga gcccgccatt
      121 cgactgcatg aaatagagcc gcgtgtcttg caactcgccg gccacctgat cgacataacg
      181 tcgcaggatc ggtgacaaat acgcatcgac caccgtcgta tcgccgcgcg gcaccaggcg
      241 aagcagtgga ctgacagcgt gacttgcgga gacctgcgtc attccggcag cgcgcgcgag
      301 ttcggcaagg cgatgttcat gggcgggata tttccaggcg tgcagcagca cgatggcgca
      361 ggcgcggatg ccgtcggcga ccgccgccgc gaaagcagcc tgcgcggcgg tctcgtccaa
      421 agtttcgact tcggcgccgt gcacatcgac ccggccgccg atttcctcca cccgctcata
      481 caacatgctc ggcagcgtga ttgcgagatc gaacagccgt gggcgcgcct ggttaccgat
      541 gcgcaatgcg tcagcaaaac ctcggttaac gatcagcagg gtacggtcgc ccttgcgctc
      601 gagcagcgca ttggtggcga ccgtggtgcc catcttcacc gcgtcgatcc ggccggacgg
      661 aatcggctga tccggtttca agccaagcac cgcgcggatt ccggccagag cggcgtcgcg
      721 gtagcggccg ggattttccg acagcaactt gtgcgtggac aaggtcccgt ccggggcacg
      781 tgcgacgatg tcggtgaagg tgccgccgcg atcgatccag aactgccact tgtcgggagt
      841 cgtcttgcct gccgtcgtca taccagcctc tgggtttgcc gtgtcggttt gtatagtatc
      901 gcccgaggaa tcgagaggcg tcgatcatgt ccctgcccaa caccacgctg gccgccgcat
      961 atgaggcaat gacgccgggc tccgccaggc tgaccgaaag ggcgcgcggc ctgttcccca
     1021 gcgggctgac ccacgacagc cggcatttcg atccgtaccc gatttatgtc acccacgggc
     1081 aggggccgat gaagtgggac gtggatggta accggtacgt ggattatttc ggcgggcatg
     1141 gagcgctgat cctcggccac ggcaatgccg ccgtgcagca ggcggtgcac gaggcctatg
     1201 accgcggcag tcatttcggt gcctgtcatg aggcggaaat ccggtgggcc gagctggtca
     1261 cgcaaatggt tccatcggcg gaacgggtgc gcttcaccaa ctccggcacc gaggcgacgc
     1321 tgatggcgct gcggctggcg cgcgccttta ccgggcgtcg gaaaatcgtg catttccgag
     1381 gacatttcca cggctggcac gatcatttgt cgaacggata ctccaaccac tttgatggga
     1441 caccgaccac cggggtgctg gcgggcattg ccgacaatgt gttgatggcc gatcccaacg
     1501 atgtcactgg gatcgatcgg ttgttctccg accacaagga cattgccgcg gtgatcctgg
     1561 agccgaccgg cgccagtttt ggcaaaatgc cgattgtccc gacgtttttg cagcacctgc
     1621 gggatctgac caaacaggct ggcacgatcc tgatcttcga cgaggtggtg acagggttcc
     1681 gcgtctcacc gggtggtctg caaaaaatcg tcggcgttac cccggacatg acgacattgg
     1741 cgaaaattct ggcgggcggc ctgccgggtg gcgcggtcgc aggccgcaag gacattctcg
     1801 atttgctcga cttcgatgta acaaaagcac tgggcaagga gaaaatagga catcagggaa
     1861 ccttcaacgc aaatccggta tcggccgcag cgggcatcgc aaccttggaa atcctggcga
     1921 caaccgatgc gtgcgaaagg gccaacgaat atggcgcaac ggtgcgctcg cggatgaacg
     1981 aggtgctgga ggacgaacag gtaaaatggg ccgtatatgg cacgtattcc ggcatgcata
     2041 tattcaccaa tccggacggt ga
//
LOCUS       DATAVD010001171         5348 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1042488, whole genome shotgun sequence.
ACCESSION   DATAVD010001171 DATAVD010000000
VERSION     DATAVD010001171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5348
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1042488"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..515
                     /locus_tag="VHX39_22315"
     CDS             <1..515
                     /locus_tag="VHX39_22315"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX3993915.1"
                     /translation="DLMDRVWTGAIIGENALQVHISAVRKALGPYRAMLKTESGRGYR
                     LLQNWTVRDQDEAVPSAVADALRETREPAPNNLPAIVTRLIGRLARVLWSGAAADDCF
                     DQAAGMAREQGALFWELRIALSRGRLKMTMGRHAEARDVLRPVYDRFTERFAIADLRA
                     GRTLLDSLPS"
     gene            674..3526
                     /locus_tag="VHX39_22320"
     CDS             674..3526
                     /locus_tag="VHX39_22320"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX3993916.1"
                     /translation="MPEQDPLPVYLAGDWEIDLARRELRARGVPVPIGGRAFEIIEVL
                     VSAGGNLVTKSDLMDRVWPGAIIGDNTLQVHISAVRKALGPYRALLKTESGRGYRLVQ
                     NWTSQQPGAVVPPTDPEPLRESREPVATNFPVIVTRLIGRSATAQRLRDLVSAWRVVT
                     LTGPGGIGKTALALEAARGLLADFDGGCFVELASLSDPGLVPSAVASALGLKINSETI
                     STETVARAIGGRHLLLVLDNCEHVIDAVANLTETVVRVCPRTTILATSREVLRIDGEY
                     AFRVPPLDVPASGRMAPDEQLDHSAVQLFVARMQALDTTFSPRAGDLLAIATICRHLD
                     GIPLAIEFAAARAATLGVQQVATGLGDRFALLTGGRRTALPRHRTLRATLDWSYDLLP
                     ETERRLLRHLAVFAGGFTLDGVAAVISGTAVTDSELVETIANLVAKSLVMLDGSGSFS
                     RWRMLETIRAYALEKLTADGELEAAAGRHAEYHGALFGRARSDWESQPTSAWLAEYGY
                     RLDDLRATLDWAFSSGGDTALGMALTVDAVPLWMVHSLMGECRRRVDQAMSYIEAETS
                     ENARLRMRLWTALSLSGMYAGGQQDDIHSAWSTTLDLAVEVGDPDYQLRSIWGLFAGS
                     FNRGDFRASLGFAERFCRVATDTAGRLIGERLVGTALHSLGEQKRARRHIEHMLAGYT
                     PPVTSTHMIRYQNDQVIAARRVLAPILWLQGFPDQAVNMVEGAVTDALAVGHALTLCN
                     LLAQAACPLAFLTGDLGAAKRFTAILVDHATRHSLNMWNTYGLCFEGLLAVGEGNTDA
                     GLNQLREAGNHMRQVGFLQYYTAWLGHLAEALGDAGQSAAGLAAIDEAIARAESTEEL
                     WCLAELLRIKGGLLLRDSGDAHAAEDCFNKALKVAREQEVLSWELRVAASLCRMRMTQ
                     RRYKEARDFLAPVYSRFTEGFATADLRDARALLESL"
     gene            complement(3625..>5348)
                     /locus_tag="VHX39_22325"
     CDS             complement(3625..>5348)
                     /locus_tag="VHX39_22325"
                     /inference="COORDINATES: protein motif:HMM:NF037660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993917.1"
                     /translation="TLDWSYILLPAEEQLLLRHLAVFAGGFTLEATASVMRHSEIAET
                     AILDGLAGLVARSLVTFDGSAAPDRWRLLETIRAYASEKLDESGESDGARRQHAEYFR
                     DLFVPESGSRSRLTHDDLAVRVREIDNVRAALDWAFSGVGNAEIGIDLTAAYGPVWLN
                     LSLMAECRERCGRALQDVERAATPNPQTQMWLQIALGSSLIDTMGDVELARMLLARAL
                     ETAETLDDLDAEARALIGLMTASQYHGEHGRARIAVNRVVQIADRLGDPAVSLVANRI
                     KATMLLTIGRLREAQPVLDRIMQSHDPPQNRGRALWYSTGHRASDRAMLSRLLWLRGF
                     VEQAHREAQASLDELGPTDPKLLICRILYIGMCRLAPMTGDFAAAEQANARLIEVATG
                     LNARRFQTLGRFLEGKLMVERGEFALGLAALRDGFDICGQTGWRMSYPEFNCWLAVAL
                     VGLGQLDEALDAVEEGLLGSGQGEDGQRWYVPELLRIKGEITLRQGMAETAEGCFLEA
                     QSLAQEQGALFWELRVALSLAYLRAGQRRPDEARQILAPVYAQFTEGFATTDLRAAKA
                     LLEAVTR"
BASE COUNT          964 a         1644 c         1736 g         1004 t
ORIGIN      
        1 atgacctgat ggatcgcgtc tggacgggcg cgattattgg ggaaaacgca cttcaggtgc
       61 acatctccgc ggtacgcaaa gcactcggcc cgtatcgagc catgctgaag accgagtcgg
      121 gccgtggcta tcgcctgctg caaaattgga cggttcggga tcaggatgaa gctgttccgt
      181 ctgccgttgc tgatgcgtta cgggaaactc gcgaacccgc gccgaacaat ttaccggcga
      241 tcgttacgcg cctcattggc cggctggctc gggtgctctg gagcggcgcg gcggccgacg
      301 actgctttga ccaggcggcc gggatggccc gcgaacaagg cgcattgttc tgggaattgc
      361 ggattgccct cagccgtggc cggctgaaga tgacaatggg gcgtcacgct gaggccaggg
      421 acgttctgcg gccggtttat gatcggttca ccgaacggtt cgcgatcgca gatttgcggg
      481 ccggtcgcac cttgctcgat tcgctgccgt cgtaacgtcg ttgatcgact gccgcggcgg
      541 gcacggtcac ggccgggggt ggattgccgg cgccggaaag gtccataatg ctgcgccgca
      601 acgtcgccgg cgttttcgcg ggccggtgga tctccgaata aagccgaatc agagccactg
      661 acgggtaatc ataatgcctg aacaggaccc gctaccggtt tatttggccg gcgactggga
      721 gatcgatctc gcgcgacgcg aactgcgggc gcgtggagta cccgtgccga tcggcggcag
      781 ggcgttcgag atcatcgagg ttttggtcag tgccggtggg aatttggtaa cgaagagtga
      841 cctgatggat cgagtctggc cgggggcgat catcggcgac aacacgttgc aggtgcacat
      901 ctccgcggta cggaaagcgc tcggcccgta tcgagcgctg ttgaagaccg agtcgggccg
      961 cggctaccgt ctggtgcaaa actggacgag ccagcaaccg ggtgcggtgg tgccgccgac
     1021 cgatcccgaa ccgttacgcg aaagtcgcga acccgtggcg accaattttc cggtgatcgt
     1081 tacgcgcctt attggccggt ccgccacggc gcaacgattg cgcgatctcg tgtcagcctg
     1141 gcgcgtggtg acgctgacag ggcccggggg catcgggaaa accgccctgg ctctcgaggc
     1201 cgcccgtggc ctgctcgctg actttgacgg cggatgtttt gtcgaactgg cctcgctgtc
     1261 cgatcccggc ctcgtgccgt ctgcggtggc cagcgcgctc ggcctgaaga tcaatagcga
     1321 aacgatttct accgagaccg tggcgcgggc aatcggcgga cggcatttac tgctggtgct
     1381 ggataattgc gaacacgtga tcgatgcagt ggcgaacctg acggaaacgg tggtgcgcgt
     1441 ctgcccgcgt accacgatat tggcgaccag tcgggaagtg ttgcggatcg acggcgagta
     1501 cgcctttcgg gttccgccgc tcgacgtgcc tgcctctggc cggatggcac cggatgagca
     1561 actcgaccac agcgccgtgc agctattcgt cgccagaatg caagcgctgg acacaacttt
     1621 ttcgccacgg gctggtgatc ttctggccat cgcgacgatt tgccggcacc ttgacgggat
     1681 tccgctggcg atcgagttcg ccgcggctcg cgccgccacg ctcggggttc agcaggttgc
     1741 caccggcctc ggagatcggt tcgcgttgtt gaccggcggg cgccgtaccg cattgccgcg
     1801 gcaccgaacg ctgcgcgcaa cgctggactg gagctatgac ctgttgcctg aaacggaacg
     1861 acgcttactg cgccacctgg ccgtattcgc cggcgggttc acgctggacg gggtggctgc
     1921 ggtcatcagc ggcaccgcgg taaccgacag tgaactggtc gagacaatcg ccaatctcgt
     1981 tgccaaatct ctcgtcatgc tggatgggtc gggatcgttc agtcgttggc gcatgctcga
     2041 aacgattcgt gcctacgctt tggaaaaatt gacggcggac ggcgagctgg aagcggcagc
     2101 cggtcgccac gccgaatacc acggcgccct gttcggccgg gcgcgcagcg attgggagag
     2161 ccaacccacc agcgcctggc tcgccgagta cggctaccgc ctcgacgacc tgcgcgccac
     2221 ccttgattgg gcgttctcat cgggaggcga cacggcgctt ggcatggcgt tgaccgtcga
     2281 tgcggtgccg ctttggatgg tgcactcgct gatgggcgag tgccgccggc gcgtcgatca
     2341 ggcaatgtct tatatcgaag ctgaaaccag cgaaaatgcg cggttgcgta tgcgcctttg
     2401 gactgcgctc agcctgtcgg gcatgtacgc aggcgggcag caggacgaca tccatagcgc
     2461 ctggtccacc actctcgacc tcgcagtgga ggttggcgat cccgactacc agctgcgctc
     2521 gatctggggt ctgttcgccg gcagtttcaa ccgcggcgac ttccgtgcgt cgttgggttt
     2581 cgctgaacgt ttctgccgcg tggcgaccga taccgccggc cggctgatcg gcgagcgcct
     2641 tgtcggaacg gcgctgcata gtctgggtga acagaaacgc gcgcgccgtc atatcgagca
     2701 catgctggcc ggctatacgc ccccggtcac cagcacgcac atgatccggt accaaaacga
     2761 ccaggtgatc gccgcccgcc gcgttctggc tccaatcctt tggctgcaag ggtttcccga
     2821 tcaggccgtg aacatggtgg agggtgcggt caccgatgcg ctcgcggttg gccacgcgtt
     2881 gacgttgtgc aatttgcttg cccaggcggc gtgcccgttg gcatttctga ctggcgatct
     2941 gggcgcggcg aagcgattta ccgcaatcct ggtggatcac gcgacgcggc attcgctcaa
     3001 tatgtggaac acctacgggc tgtgctttga aggcttgttg gcggtcgggg aaggcaatac
     3061 cgacgctggt ctgaatcagc tgcgcgaggc gggcaaccac atgcgtcagg ttggcttctt
     3121 gcaatattac acagcatggc tcggtcattt ggcggaggcc ctcggggatg ccgggcagag
     3181 cgctgccgga ctcgcggcga tcgatgaagc gattgcgcga gcggagagta ccgaagagct
     3241 ttggtgcctt gcggaactgc tgcggatcaa gggcgggctt ttgttgcgag actccggtga
     3301 tgcccacgcc gcggaggact gtttcaataa ggcactgaag gtcgcccggg aacaggaggt
     3361 tctgtcatgg gagttgcgcg ttgcggcaag cctttgccgc atgcgaatga cgcaacgccg
     3421 ctacaaagag gcgagggact ttctggcgcc ggtctacagc cgatttaccg aagggttcgc
     3481 aacggcggat ttacgggatg cccgcgcact gcttgaaagc ttgtagtcaa accaggcggt
     3541 gagagaaggt ctgccgcgcc gatgcacaca gacattccct aaactcgtcc gttcaatttt
     3601 gcaccgttca gcaggcgtgg cgccctaccg cgtaaccgcc tcgagcaacg ccttcgcggc
     3661 ccgcaggtcg gtggttgcga aaccctctgt gaattgcgcg tagaccggcg ccagaatttg
     3721 tcgcgcctcg tcggggcgac gctgccccgc ccgtaggtag gcaaggctga gcgcgactcg
     3781 caactcccag aacaacgccc cctgctcctg ggcgaggctc tgcgcctcaa ggaaacaacc
     3841 ctcagccgtc tcagccatgc cttgccggag cgtgatttcg cccttgatgc ggagcaactc
     3901 ggggacatac caccgctggc cgtcctcgcc ttgaccggac ccaagcagcc cttcctcgac
     3961 ggcgtccaga gcctcgtcga gctgtcccag accaaccagc gccaccgcga gccaacaatt
     4021 gaactccgga tatgacatgc gccatccggt ttgcccgcag atgtcgaacc cgtcgcgcaa
     4081 cgccgccagg ccaagcgcga attcaccgcg ctcgaccatc agcttgccct ccaggaagcg
     4141 tcccaaggtc tgaaaacggc gcgcgttcag gcctgtggcg acctcgatca gacgcgcatt
     4201 cgcttgctcg gcagccgcga agtcacccgt catcggtgcg aggcgacaca tgccgatata
     4261 cagaatccga cagatcagaa gtttaggatc cgtcggcccc agttcatcga ggctcgcctg
     4321 ggcttcgcga tgcgcttgtt ccacgaaacc ccgtagccaa agcaaccgcg acagcatggc
     4381 ccggtccgac gcacggtgac cagtcgaata ccaaagtgca cgccctcgat tttgtggcgg
     4441 atcatgtgat tgcattatac gatcgagcac gggctgtgcc tcgcgcaacc tgccgatggt
     4501 cagcagcatc gtggccttga tgcgattggc gacaaggcta acggccgggt cgccgagccg
     4561 gtcggcgatt tgcacgaccc gattgaccgc gattcgggcc ctgccgtgct cgccgtgata
     4621 ttgggacgcg gtcatcagcc cgatcagagc ccgcgcctcc gcatcaagat catcaagcgt
     4681 ctcggcggtt tcgagggccc tggccagcag cattcttgcc agttccacgt cgcccatcgt
     4741 gtcgatcagc gaactgccaa gggcaatctg cagccacatc tgagtttgcg ggtttggcgt
     4801 tgcggcacgc tcgacatcct gcagcgctcg gccgcaccgc tcgcggcatt cggccatgag
     4861 cgacaggttc agccagaccg ggccataagc ggcggtgaga tcgatgccaa tttcggcgtt
     4921 gccaacgccg gaaaaagccc agtcgagcgc ggcgcgaacg ttgtcgatct cgcgtacccg
     4981 aactgccagg tcgtcgtgcg tcagacgcga tctcgagccg gattcgggca cgaacagatc
     5041 gcgaaaatac tctgcgtgct gtcgcctggc gccgtcggac tcgccgcttt cgtcaagctt
     5101 ctcggacgca taagcccgga tcgtttcgag cagccgccag cgatcgggcg ccgccgatcc
     5161 atcgaatgtg acgagcgacc gggcaacgag accggcgagc ccgtccaaaa tggcagtctc
     5221 ggcgatttcg gagtggcgca tcaccgaagc cgtggcctca agggtgaagc caccggcgaa
     5281 gacggcgagg tggcgcagca gaagttgttc ctctgccggc agcaggatgt aactccagtc
     5341 aagtgtgg
//
LOCUS       DATAVD010001172         2798 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1413745, whole genome shotgun sequence.
ACCESSION   DATAVD010001172 DATAVD010000000
VERSION     DATAVD010001172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2798
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1413745"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..984)
                     /locus_tag="VHX39_22330"
     CDS             complement(<1..984)
                     /locus_tag="VHX39_22330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003618266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HEX3993918.1"
                     /translation="MAPNADDVASALVVEQAPSYAATPTFGPERFINRELSWLDFNHR
                     VLEEAENPRHPLLERVRFLSISASNLDEFYSVRVAGLIGQAKAGFTQPTPDGRTPAQQ
                     LAEIAVRGGALVADQQRIWTELLGEMQEAGIVLCEAAVLSEDDRTWLDAWFMERVFPV
                     LTPLAIDPAHPFPFIPNMGLVMALLLVRSEDGLGMRAMLPLPAQVERFIRLPAQERGR
                     DGKAVVRFILLEELVLMFLDRVFPGFTVNGGGLFRLIRDTDVEFEEEAEDLVRSYETA
                     LKRRRRGVVIHLRVDPAMPEELRALVADELGAEPDEITVQAGLLAVVDVHQM"
     gene            1182..2417
                     /locus_tag="VHX39_22335"
     CDS             1182..2417
                     /locus_tag="VHX39_22335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX3993919.1"
                     /translation="MRDSLLPDRGLMRRRFLGQAGIAGLAMAASQAQAGTTIELPLPG
                     GPDTRPITTAFPQKGAMVLQRTRPPLLETPFDVFDQGVFTPNDRFFVRWHWAVIPTEI
                     NVDEFRLTVHGNVNQTLSLSLKEIMSLPHVEMAAVNQCSGNSRGLFQPRVAGGEWGNG
                     AMGNARWTGVTLKSVLDKAGVKPGSVQVRLNGLDQPVVADGPDFMKSLDIDHARDGEV
                     MIAFAMNGQPLPLLNGFPLRVVVPGWYATYWMKMLNDIEVLDQPDTNFWTKSAYTIPD
                     TPNADMKPGQTGVAMIPINRMNPRSFVTNLEAGATIPAGKPTLARGIAFGGDSGVKQV
                     EFSSDGGKIWRTATLGKDAGKYSFRRWEAHFTPAAKGSYTLMVRCTNSNGVAQPDHAN
                     WNPAGFMRNIVEATPVTAS"
     gene            2432..2761
                     /locus_tag="VHX39_22340"
     CDS             2432..2761
                     /locus_tag="VHX39_22340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX3993920.1"
                     /translation="MARSRLKILLLTATVLSLCGEAQSAIVLKSTNVTLPDSSVMFPS
                     GPGADVANSNCLSCHSVGMVMNQPVMSRAAWEAEVNKMRNVFKAPVQASDVAAITDYL
                     VSIKGPK"
BASE COUNT          573 a          880 c          863 g          482 t
ORIGIN      
        1 catttgatgc acatcgacaa cggccaagag gccggcctga acggtgatct cgtccggctc
       61 ggcaccgagt tcgtcggcca ccagagcacg caattcctcc ggcatggcag gatcgacgcg
      121 caggtgaatc acgaccccgc ggcggcggcg cttcaaggcg gtttcatacg aacgaacgag
      181 atcttccgcc tcttcctcga attccacgtc ggtgtcgcgg atcaggcgga acaggccgcc
      241 gccgttcacc gtgaagccgg gaaacacccg gtcgaggaac atcaacacca actcttccaa
      301 caatataaat cttaccaccg ccttgccgtc ccgccccctc tcctgggccg gcaaccggat
      361 aaaccgctcg acctgtgcgg gcagcggcag catggcgcgc atcccgagcc catcctcgga
      421 acgcaccagc agcagcgcca tcacgaggcc catattcgga atgaacggaa acggatgcgc
      481 cggatcgatc gcgagcgggg tcagcaccgg gaacacccgc tccatgaacc aggcgtccag
      541 ccaggtacgg tcgtcctccg acagcaccgc ggcctcgcac agcacgatcc cggcctcctg
      601 catctcgcct aacaactcgg tccagatgcg ctgctggtcc gcgaccaggg cgccaccgcg
      661 gactgcgatc tctgccagtt gctgcgccgg ggtgcggccg tcaggggtgg gttgggtgaa
      721 gccggccttg gcctgaccga tcaggccggc aacccgcacc gaataaaatt cgtcgaggtt
      781 ggaagcgctg atcgacaaaa accgcacacg ttcgagcaac gggtggcgcg gattctccgc
      841 ctcctccaga acgcgatggt tgaagtcgag ccacgataac tcgcggttga taaaccgctc
      901 cggcccgaag gtgggtgtgg cggcgtacga cggggcctgc tcgaccacca gggcagaggc
      961 cacgtcatcc gcgttcggtg ccatgcaata tctccaacca acgcaggtag attaccccga
     1021 accccacctc gcgggcgagg ggccaccggg ccgggcaaaa gacaatttcg ccaaaacatc
     1081 acccttcggc cgtagccctc actggcttcc ggttgacaga gcgtccggcc gccgtcgata
     1141 tgccaaccga atcaacaaga atgagccacc cggaggttac aatgagagat tcgctgttgc
     1201 cggatcgtgg gttgatgcgc cggcgcttcc ttgggcaggc tgggatcgcc ggattggcaa
     1261 tggcagccag ccaggcccag gccgggacca ccatagagct tcccttgccc ggcggacctg
     1321 acacaaggcc gattaccacc gcgttccccc aaaagggcgc gatggtcttg cagcggacgc
     1381 ggccgccact gctggagacc ccgtttgacg tgttcgatca gggcgtgttc accccgaacg
     1441 atcgtttctt cgtccgctgg cattgggccg tgatcccgac cgagatcaac gtcgacgagt
     1501 tccgcctcac ggtgcatggc aacgtgaacc aaacgctttc cttatcgctc aaggaaatca
     1561 tgagcctgcc tcatgtcgag atggcagcgg tcaatcagtg ttcaggaaat tcgcgcgggt
     1621 tattccagcc cagagtcgcg ggcggtgagt ggggcaacgg ggcgatgggc aacgcgcgct
     1681 ggaccggcgt caccctgaag agtgtgctgg ataaggccgg ggtcaagccg ggcagcgtgc
     1741 aggtccggct caacggcctg gaccagccag tggtggcaga tgggccggac ttcatgaaat
     1801 cgctcgacat cgatcatgca cgcgacggcg aggtcatgat tgcttttgcc atgaacggtc
     1861 agccattgcc gctgttgaat ggatttccgt tgcgggtcgt ggtgccgggc tggtacgcga
     1921 cctattggat gaagatgctg aatgacatcg aggtgctcga tcagccggac accaatttct
     1981 ggacgaagtc ggcctacacg atccccgata cgccgaacgc cgacatgaag ccgggccaga
     2041 ccggtgtcgc gatgataccc atcaaccgca tgaacccgcg ctccttcgtg accaacctgg
     2101 aagcgggtgc cacgattcca gccggcaaac cgacgctggc gcgcggcatc gcctttggcg
     2161 gagacagcgg cgtgaagcag gtggagttct ccagcgacgg cggcaagatc tggcgcaccg
     2221 caacgcttgg caaggatgca ggcaagtaca gcttccgccg gtgggaggcg catttcacgc
     2281 ctgccgcgaa gggtagctac acgctgatgg ttcgctgcac caacagcaac ggtgtggcgc
     2341 agcccgatca cgcgaactgg aatccggccg ggttcatgcg caacatcgtc gaagcgacgc
     2401 cggttacggc cagctgagga gtaacccgga gatggctcgt tcaagactca aaattctgct
     2461 cctgaccgcc accgtgctgt cgctgtgtgg cgaggcgcaa tcggcgatcg tgctgaaatc
     2521 gaccaacgtg acgctgccgg acagctccgt catgtttccg tcaggcccag gagcggatgt
     2581 cgccaattca aactgtctct cgtgtcactc ggtcggtatg gtaatgaacc agccggtcat
     2641 gtcgagggcg gcgtgggagg ccgaggtcaa taaaatgcgc aatgtcttca aggcccccgt
     2701 gcaggccagc gacgttgctg cgatcaccga ttacctggtc agcatcaagg ggccgaaata
     2761 gcagttcacc cgttgagtgt ttgtggcatc gtttaagc
//
LOCUS       DATAVD010001173         3350 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_484430, whole genome shotgun sequence.
ACCESSION   DATAVD010001173 DATAVD010000000
VERSION     DATAVD010001173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3350
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_484430"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(222..1427)
                     /locus_tag="VHX39_22345"
     CDS             complement(222..1427)
                     /locus_tag="VHX39_22345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003592413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HEX3993921.1"
                     /translation="MTIRNELIDELLAGQDPASVMRQDGLLGALKKALLNRLMAAEFD
                     HHLAQERASGEGKNHRNGSTRKRVLTDDSHVEVTIPRDREARFDPVLIGKYQRRLPGF
                     DDKVISLYTRGMSTREIQGHLEEIYGAEVSPQLISTVTDAVTAEVAEWQSRPLEPLYP
                     VMFFDALRVKVRDQGTVSNKAVYLALGITPDGRKHILGLWIDPNEGARFWLRIVNELR
                     NRGVKDILIAVVDGLKGFPEAINAAFPQTLVQTCIVHLLRNALAYVSWQDRKQVVAAL
                     KPIYQAATADAALLALDAFEAGPWGQKYAAIAPLWRRQWDQVIPFFAFPPEVRRIIYT
                     TNAIESLNSTLRTAIRSRGHFPTDEAAIKLLYLVLRRVSNDWKNAQREWTTAMTQFAI
                     MFGDRFSVE"
     gene            complement(1502..2434)
                     /locus_tag="VHX39_22350"
     CDS             complement(1502..2434)
                     /locus_tag="VHX39_22350"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HEX3993922.1"
                     /translation="MKVVFHASAGPDLAGRLAALPGLDVAMCREDDTQTLFRLLPDCD
                     VLWHVLQRCTAEMIAAAPRLKLIQKIGVGVNTIDLEAARSQGIPVCNLPGTNARAVAE
                     MALGLMLSVLRRIPRFDRGLRAGVWTDVEMQDGLGELGGRTVGLVGFGAIPRILAPIL
                     AAMGCRVIYTARNRVDDPVAAYRTLDALLAEADVVSLHLPLVPETQHVIGATALGRMK
                     PGAILINTGRGGLVDPVALVDALTSGRIAGAGLDVFEAEPLADGDAILALPNVVVTPH
                     VAWLTTGTFDRSFALAAENCRRIASGAPLLHRVV"
     gene            complement(2431..>3350)
                     /locus_tag="VHX39_22355"
     CDS             complement(2431..>3350)
                     /locus_tag="VHX39_22355"
                     /inference="COORDINATES: protein motif:HMM:NF012341.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEX3993923.1"
                     /translation="AAIGEPLYRHLGGVDATLIPLPQIQIFGGGAHAGRRVDIQDFMV
                     MCPAAETFAQALDWTAEVYRAAGKLMEASGSLAGVADEGGWWPSFSSNEQALDTLVSA
                     IEKAGFKPGEQVGIALDIAASEFGAKGRYKLALDGKDLSSEGMIELLTGWIGRYPILS
                     IEDPLAEDDQEGFVAFTKAVGGKVQIVGDDFLVSDADRVRDAAAQGAANTVLLKPNQR
                     GTLTETYDARRAASECGYGMIVSARSGETEDVTIAHLAVGWTAGQLKVGSFTRGERMA
                     KWNEMLRIEEALGGKAKFAGGSVLGRSAG"
BASE COUNT          612 a         1226 c          919 g          593 t
ORIGIN      
        1 ttttgcgggc tgatatggtt tggttttttt tgtctcttac ggtgttcatt gtctgcggca
       61 gtccgaacgc actgggcggc cggtttgctt gtttggagca ccagggcgac cttgccaatt
      121 tgtcggctgc ggccaaaggt agaattgaaa tgcaaggtca ccgggactgt gccggggcct
      181 atcaggaatc ttgtgtgagg ggtcggtttc atctgatccc tctactcgac gctgaagcgg
      241 tcgccgaaca tgatggcgaa ctgggtcata gcggtggtcc attcgcgttg agcattcttc
      301 caatcgttgc tcacacggcg caagaccaaa tatagcagct tgatcgcggc ctcgtcggtg
      361 gggaagtgtc cacggctgcg aatggcggtt cgcaatgtgc tgttgaggct ctcgatcgca
      421 ttggtggtgt agatgatccg ccgcacctcg ggcgggaagg cgaagaacgg gatcacctgg
      481 tcccattggc gccgccataa cggggcgatc gcggcgtatt tctggcccca ggggccggcc
      541 tcgaaggcat ccagcgcgag cagcgccgcg tcagccgtgg ccgcctggta gatcggcttc
      601 aaggcggcca cgacctgctt gcggtcctgc caggagacat aggccagcgc gttgcgcagc
      661 agatgaacga tgcaggtttg caccagggtc tgcgggaagg cggcgttgat cgcctcgggg
      721 aaccccttca gcccgtcgac cacggcgatc aggatgtcct tgaccccgcg gttgcgcaac
      781 tcgttgacga tccgcagcca gaacctggcg ccctcgttcg ggtcgatcca tagccccagg
      841 atatgcttgc ggccgtccgg ggtgatgccg agggcaaggt ataccgcctt gttagacacc
      901 gtgccctggt cgcggacctt cacccggagc gcgtcgaaga acataaccgg atacagcggc
      961 tccagcgggc gggactgcca ttcggccact tcggcggtga cagcgtcggt gaccgtgctg
     1021 atgagctgcg gcgagacctc cgcgccataa atctcctcca ggtgcccctg gatctcacgg
     1081 gtgctcatgc cgcgcgtgta gagcgagatg accttgtcgt cgaaacccgg cagccggcgc
     1141 tggtatttgc cgatcagcac tggatcgaag cgtgcctccc ggtcacgcgg aatggtcacc
     1201 tcgacatggc tgtcgtcggt caacacgcgc ttgcgggtcg agccgttgcg atggttcttg
     1261 ccctcacccg aggcacgctc ctgggccaga tggtgatcga actcggccgc catcagccgg
     1321 ttcagcagcg ccttcttcaa cgcgccgagc agcccgtcct ggcgcatcac cgatgccggg
     1381 tcctggccgg caagcaattc atcaatcagt tcgttccgta tggtcatggg tctctccaag
     1441 cccgtcaccg ggctgactat gacccctcac acaagattcc tgataggctc gcgccctggc
     1501 atcaaaccac ccgatgcaac agcggcgccc ctgaagcgat ccgccggcaa ttctccgccg
     1561 ccaaggcgaa gctccggtcg aacgtccccg tcgtcagcca ggcaacatgc ggcgtcacca
     1621 caacattcgg cagcgccaaa atcgcatcgc catccgccaa cggctccgcc tcgaatacat
     1681 ccaaccctgc tccggcgatc cgccccgacg tcagcgcatc gaccaaagca accggatcga
     1741 ccagccctcc acggccggta ttgatcagaa tggcacccgg tttcatccgc cccagcgcag
     1801 tcgcgccaat cacatgctgc gtctccggca ccagcggcag atgcaggctc accacatctg
     1861 cctccgccaa cagtgcgtcc agcgtccgat acgccgccac cggatcgtcc acccggttgc
     1921 gcgccgtata gatcacccgg catcccatcg ccgccaggat cggcgccagg atccgaggga
     1981 tcgccccgaa cccgaccagc cccaccgtac gcccgcccaa ctctcccagc ccatcctgca
     2041 tctcaacgtc cgtccacaca cccgcccgca acccgcggtc aaatcgagga atccgtcgca
     2101 gcaccgacag catcaacccc aatgccattt ccgccaccgc ccgggcattc gtcccgggca
     2161 aattgcagac tggaatcccc tgcgaccgag cggcctccag gtcgatcgtg ttcacgccta
     2221 cgccaatttt ctggatcagc ttcagccggg gcgccgccgc aatcatctcg gccgtacacc
     2281 gctgcagcac atgccacagc acgtcgcagt ctggcagcaa ccggaacagc gtctgcgtat
     2341 cgtcttcccg gcacatcgcc acatccagcc cgggcagcgc cgccagccgc cccgccaggt
     2401 ccggcccagc cgaggcatgg aagacgacct tcatccagca gaccgcccca gcaccgaccc
     2461 gccggcaaac ttagccttgc cgcccagcgc ctcctcgatc cgcagcatct cgttccactt
     2521 cgccatccgc tcgccacggg taaaactacc caccttcaat tgcccggccg tccagccaac
     2581 cgcgaggtgc gcgatcgtca catcctccgt ctcccccgac cgggcggaca cgatcatccc
     2641 gtacccgcac tccgaggctg cccgccgggc atcatatgtc tcggtcaacg tcccccgctg
     2701 attgggcttc agcagcacgg tattggccgc gccttgcgcc gccgcatccc gcacccggtc
     2761 cgcatcgctg accaggaaat catccccgac gatctgcacc tttccgccaa cagccttcgt
     2821 gaacgccacg aacccctcct ggtcgtcctc cgccagcggg tcctcgatcg acaagatcgg
     2881 atagcgccca atccacccgg tcagcagttc aatcatcccc tcgctgctca aatctttccc
     2941 atccagcgcc agcttgtaac gccccttcgc cccgaattcc gaggccgcga tatccaacgc
     3001 gatccccacc tgctcccccg gcttgaatcc tgccttctcg atcgccgaga ccagcgtatc
     3061 caacgcctgt tcgttgctgg aaaacgatgg ccaccagcca ccttcatcgg ccaccccggc
     3121 aaggcttccc gacgcctcca tcagcttgcc cgcggcgcga tagacctccg ccgtccagtc
     3181 caacgcctgg gcgaaggtct ccgccgccgg gcacatgacc atgaaatcct ggatatcgac
     3241 ccgccgcccg gcatgcgcgc cgccgccaaa aatctggatc tgcggcagcg gaatcagcgt
     3301 cgcatccacc ccacccagat gccgatacaa cggttccccg atcgccgccg
//
LOCUS       DATAVD010001174         3298 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1042819, whole genome shotgun sequence.
ACCESSION   DATAVD010001174 DATAVD010000000
VERSION     DATAVD010001174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3298
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1042819"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..333
                     /locus_tag="VHX39_22360"
     CDS             <1..333
                     /locus_tag="VHX39_22360"
                     /inference="COORDINATES: protein motif:HMM:NF024639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HEX3993924.1"
                     /translation="LYDDADVRNLLHWMADEARRHGGTIDDVRYCPFHPDAKLSAFRA
                     VSDWRKPAPGMLHDLIRAWELDPARAVLIGDQATDMAAATSVGIAGHLFCGGNLLSFV
                     RPIMDAVT"
     gene            complement(353..538)
                     /locus_tag="VHX39_22365"
     CDS             complement(353..538)
                     /locus_tag="VHX39_22365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993925.1"
                     /translation="MIDWSGSPETLQLVRLLILATAAVFIGSRFLPQRYRHRVGVMTT
                     ICYLAGIAAFVIYLLVR"
     gene            complement(582..1034)
                     /gene="gpt"
                     /locus_tag="VHX39_22370"
     CDS             complement(582..1034)
                     /gene="gpt"
                     /locus_tag="VHX39_22370"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019086624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000310 - xanthine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HEX3993926.1"
                     /translation="MATHYLSVSWDEFHRDAKQLAERLAPAGPWRGIVAISRGGLVPA
                     TIIARALNIRVVETVSVVAYDQLSQGEEALGEPKVTKLPDFAGDGEGFLIIDDLVDTG
                     TTARVVRALLPKAYFACVYAKPAGRGLADNVLKEVSQDTWIVLPWEQM"
     gene            complement(1034..1375)
                     /locus_tag="VHX39_22375"
     CDS             complement(1034..1375)
                     /locus_tag="VHX39_22375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-binding protein"
                     /protein_id="HEX3993927.1"
                     /translation="MADTISFAEFEAVDIRVGTIIDAQPFPQARKPAIKLTIDFGPDV
                     GVKKSSAQLTVHYQPDRLLGRQVCAVVNFPPRQIGPFISEVLTLGMPDADGAVVLIAP
                     DLKVPNGGKLF"
     gene            1590..3188
                     /locus_tag="VHX39_22380"
     CDS             1590..3188
                     /locus_tag="VHX39_22380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase family protein"
                     /protein_id="HEX3993928.1"
                     /translation="MRDYHFPGRSPVYATHGMAATSMPAATLTALDVLREGGNALDAA
                     IAACAVLCVIEPQSTGIGGDCFCLYAPAGSGKVIGLNGSGRAPAAATIDWYENAGIKT
                     LENTSAHSVTVPGAINAWETLLKAHGRKGLDELLQPAIRFAEEGWPVAPKLAWDWKRL
                     EGKLRKNGSFHFLPGGSAPNPGDIFIQPGLAETLRAIARHGPRAFYEGPIAADIVATL
                     RKHGGLHTEEDFANGLGNADFVEPITIKWNGYDVYQIPPNGQGILVLMILGMLEGLGD
                     APDGPLGTIRAQRHIEAARLAYRDRDAFVADMSQVDVPVAKLLSREYLDACRGLIKDD
                     KAMVNLPAAGEALMPPHRDTVYLCVVDKDGNACSFINSLFQGFGSGILSERSGVMLQN
                     RGFGFRLQRVHPNCIAPRKRPMHTIIPGMVGKDGQAVMPYGVMGGHYQPMGHSWFLTN
                     FLQYGLDIQEAIDLPRLLPLGGKLEIERGIPADVVARLAAMGHKPEIVERPHGGGQAI
                     WIDRDRGCLVAGSEPRKDGLALGY"
BASE COUNT          640 a         1058 c          996 g          604 t
ORIGIN      
        1 ctttacgatg acgccgacgt acgaaacctg ctgcattgga tggcggatga ggcgcggcgc
       61 cacggcggca ccatcgacga tgtgcgttac tgcccgttcc accctgatgc gaagctgtct
      121 gcgttccggg cggtcagcga ctggcgcaaa ccggctccgg gcatgttgca cgacctgatt
      181 cgagcctggg aactcgatcc agcgcgtgcg gtgctgatcg gcgatcaggc aaccgatatg
      241 gctgcggcca ccagcgtggg gattgccggc catttgtttt gcggcggcaa tttattgtcg
      301 tttgtgcggc caattatgga tgctgtgacg taacggtggc cgcctcgcgg gttcagcgca
      361 cgagcaaata aatcacgaac gcagcgatcc cggcgaggta acagatcgtc gtcataaccc
      421 cgacacggtg ccgatagcgc tgcggcagaa atcggctgcc aatgaacact gcagcggtcg
      481 ccagaatcaa aagtctcacc agttgcagcg tttccggcga acctgaccag tcgatcacga
      541 tgtttgctgc aaagcctgag ggtcgccgag gcgcgtggac gtcacatctg ctcccacggc
      601 agcacgatcc aggtgtcctg gctaacctcc ttcagcacat tgtccgcgag gcctcgaccg
      661 gccggcttcg cgtaaacaca agcaaaatag gctttcggca acagcgcgcg caccacgcga
      721 gcagtcgttc ccgtatcgac cagatcgtcg atgatgagaa atccctcgcc gtctcccgcg
      781 aagtcgggaa gcttggtcac cttgggttcg ccaagcgctt cttcgccttg cgagagttgg
      841 tcgtaggcga cgaccgaaac ggtctccaca acgcgaatgt tcagggcacg ggcgatgatc
      901 gttgcgggga caaggccgcc tcggctgatc gcaacgatgc cgcgccacgg gccggccggc
      961 gccaggcgtt ctgccaactg cttcgcgtcg cgatgaaact cgtcccacga taccgacaga
     1021 taatgggtgg ccatcagaac agtttgccgc cattgggcac tttgaggtcc ggtgcgatca
     1081 gcacgaccgc gccgtcggca tcgggcattc ccagggtaag gacctcgctg atgaaagggc
     1141 caatctggcg cggcgggaag ttgaccaccg cgcaaacctg gcggcccagt aaccggtccg
     1201 gttggtaatg cacggtcaac tgggccgaag actttttcac cccgacatca ggcccgaaat
     1261 cgatggtcag cttgatcgcc ggcttccgag cctgaggaaa cggctgggcg tcgatgatcg
     1321 tgccgacacg gatgtccacc gcctcgaatt cggcaaagct gatggtgtcg gccatacgac
     1381 gagccccttc gcaatacgat aggagaaggt ttaggcggca tcacgcggct tgtccaaggc
     1441 tcgtagcaag gctcggcgca gaagctgaac caattcttcg cgcattaccc aactgggatc
     1501 ccaggccaac cgggcaaacg gaagttgaac aattcccagg cacggttcat cctcctgccc
     1561 ggtcaagccg tccatccaaa ggagcgttga tgcgcgatta ccactttccc ggccgcagcc
     1621 cggtctatgc cacccatggt atggccgcca cctcgatgcc ggccgcgacc ctgaccgcgc
     1681 tcgacgttct gcgcgagggc ggcaacgcgc tcgacgccgc catcgccgcc tgcgccgtgc
     1741 tgtgcgtgat cgagccgcag tcgaccggca tcggcggcga ctgcttctgc ctctacgctc
     1801 ccgccggatc gggcaaggtg atcggcctca acggttccgg ccgagcccct gccgccgcaa
     1861 cgatcgactg gtatgaaaat gccggcatca agacgcttga aaacacctcg gcccattccg
     1921 tcaccgtgcc aggcgcgatc aacgcctggg agacattgct gaaagcgcac ggccgcaaag
     1981 gcctcgacga attgttgcag cctgcgatcc gtttcgctga agaaggctgg ccggtcgccc
     2041 ccaaactggc gtgggactgg aaacggctcg agggaaaact ccgcaagaac ggatcgttcc
     2101 acttcctgcc cggcggctcg gcgcccaacc ccggtgacat cttcatccaa cctgggctgg
     2161 ccgaaacgtt acgtgccatc gcacgccatg gcccccgtgc cttttacgaa ggcccgattg
     2221 cggccgacat cgttgccact ctgcgcaaac atggcggact gcacaccgag gaagatttcg
     2281 ccaacggcct cggcaacgcc gacttcgtcg aaccgatcac gatcaaatgg aacggttacg
     2341 acgtgtatca aattccgccg aacggtcagg gcattctggt gctgatgatc ctcggcatgc
     2401 tggaaggtct cggcgatgcc cccgacggtc ctctgggcac catccgcgca cagcgccaca
     2461 ttgaggccgc acgtctggcc taccgcgacc gcgatgcttt cgttgccgac atgtcgcagg
     2521 tcgacgtccc ggtcgcgaaa cttttgagcc gtgaatacct cgacgcctgc cgtggcctga
     2581 tcaaagacga caaggcgatg gtcaacctgc ccgcggccgg tgaggctttg atgccgccgc
     2641 atcgcgacac cgtctatctg tgcgttgtcg ataaagacgg caatgcgtgc agcttcatca
     2701 actcactgtt ccagggcttc gggtccggca ttctgtcgga acggtccggt gtgatgctgc
     2761 agaatcgcgg cttcggcttc cgcctgcagc gcgtccaccc gaattgcatc gcgccacgca
     2821 agcggccgat gcacacgatc atcccgggga tggtcggcaa agatggccag gcggtgatgc
     2881 cctacggcgt gatgggcggc cactaccagc ctatgggcca ctcctggttc ctgaccaatt
     2941 tcctgcagta cggcctcgac attcaggagg cgatcgacct gccgcgctta ctgccgttgg
     3001 gcggcaaact ggagattgag cgcggcattc ccgccgatgt cgtggcacgt ctggccgcga
     3061 tgggtcacaa gccggaaatc gtcgagcgcc cacatggcgg cggccaggca atctggatcg
     3121 accgagatcg cggctgcctc gttgccggct ccgaaccccg caaggatggt ctcgcattgg
     3181 gctactgacg gttggttgac tgagtcaact ttcgggtcca tcctgacggg atggaacaga
     3241 atagcctcga ccgccgtacc gaagcggtcc gcgccttcaa ccggttctat acgcgccg
//
LOCUS       DATAVD010001175         2152 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_116923, whole genome shotgun sequence.
ACCESSION   DATAVD010001175 DATAVD010000000
VERSION     DATAVD010001175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116923"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..1585)
                     /locus_tag="VHX39_22385"
     CDS             complement(113..1585)
                     /locus_tag="VHX39_22385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HEX3993929.1"
                     /translation="MRRPGFAVALLVCLTAAGCMVGPDYKRPDAPASPAFKELAGWKP
                     TTPRDDLDKGAWWSVYRDPELDRLERMVEVSNQTVKEFEAEYRNAVALVGVARAGLFP
                     TASLNSGITRSGGGGGGGSGGFGSGGGGGRGDSTIYSIQGSVSWDLDVWGKVRRQVES
                     GVAGAQASAADLANAKLSAQATLATDYFDLRAEDSLAQLLRETVDAYQRALDITRNQY
                     RAGTSSSADYVTALAQLQSTQAQLVGVSVQRQTFEHAIAMLTGHAPADLTIAPARLTS
                     VVPVVPAGLPSTLLERRPDIAAAERQMQQQNALIGVQVAAYYPDISLSALGGFESTMV
                     SQLFTTASRVWSLGAAGAETLFSGGARPAAVAAARATYDQSVATYRQAVLTAFQQVED
                     ALSSLRILEQQASAEAIAVSSTRKAVDVTLNEYRAGTVAYTSVITEQALLLSDQQTAL
                     AVQQSRLVESVALIEALGGGWSVGSLPEPAVLKRANPVLP"
     gene            complement(1582..>2152)
                     /locus_tag="VHX39_22390"
     CDS             complement(1582..>2152)
                     /locus_tag="VHX39_22390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007399655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3993930.1"
                     /translation="LNSEPVLIAAALIAVYIGLGVLYESYIHPITIISTLPSAGVGAV
                     LALLAFNIEFSIISLIGVILLIGIVKKNAILMIDFALEAERSHNMTPRDAIFEACRLR
                     FRPIMMTTSAAILGALPLALSFGDGGELRRPLGISIVGGLLLSQLLTLYTTPVLYLYL
                     DRFRLWALRWFHRMFPGLSGTAPTPGAAE"
BASE COUNT          412 a          727 c          660 g          353 t
ORIGIN      
        1 cagcacgagc agcgttggcg gtattccccg acagtccggc gagcagcatt ctggcggatg
       61 tcgcggattt cactgttagc cgggcgcgct gacacaagag gaaccgcggt ggtcacggca
      121 gcacgggatt ggctcgcttc aataccgctg gttccggcag ggaaccgacg gaccagccac
      181 cgcccaaggc ctcgatcagt gccacgctct cgaccaggcg gctctgctgc acggcgagcg
      241 cggtctgctg atcgctcaac agcaaagcct gttcggtaat gacgctggtg taggcgaccg
      301 tgccggcgcg gtattcgttc aacgtgacgt cgaccgcctt gcgtgtcgag ctgaccgcga
      361 tcgcctcagc ggatgcctgc tgctccagga tacgcaggct ggataacgca tcctccacct
      421 gctggaatgc cgtcagcacg gcctgccgat aggtcgccac cgactggtca tacgttgccc
      481 gcgccgccgc cacggcagcc ggtcttgcgc cgccggagaa cagcgtctcg gccccggcgg
      541 cgccaagcga ccacacccgg ctggcggtgg tgaacaactg cgacaccatg gtgctctcga
      601 agccacccag tgccgacagc gaaatgtccg ggtaataggc cgcgacctgc accccgatca
      661 gcgcgttctg ctgctgcatt tggcgttcgg cggcggcaat gtccggccgc cgctccagca
      721 acgtggacgg caggccggcc ggcaccaccg gtaccacgct ggtcagccgc gccggcgcga
      781 tggtgagatc ggcgggcgca tgcccggtca acatggcaat ggcgtgctca aacgtctgcc
      841 gctgcacgct cacgccgaca agctgcgcct gggttgactg caattgtgcc aacgcggtca
      901 cgtagtccgc actcgatgac gtgccggcac ggtactggtt gcgggtgatg tccagcgcgc
      961 gctgataggc gtcgacggtt tcccgcagca attgcgccaa cgagtcctcg gcgcgcagat
     1021 cgaagtaatc ggtcgccaat gtcgcctgcg ccgacagttt ggcgttcgcc agatcggccg
     1081 cactggcctg cgcgccggca acaccgcttt ccacctgacg gcgaaccttg ccccacacat
     1141 ccagatccca cgatacgctg ccctggatgg aatagatcgt gctgtcgccg cggcctccgc
     1201 cgccaccgga cccgaatccc cccgaaccgc cgccccctcc gccaccggag cgcgttatgc
     1261 cgctgttcag ggacgcggtc ggaaacagcc cggcgcgagc cacccccacc agtgcaacgg
     1321 cgttacgata ctccgcctcg aattccttca cggtctggtt ggagacttcc accatccgtt
     1381 ccaggcggtc cagctcggga tcgcggtaaa ccgaccacca ggcgcctttg tccaggtcgt
     1441 cacgcggcgt agtgggcttc catccggcca gttccttgaa tgcgggtgac gccggggcat
     1501 ccggccgctt gtagtccggc ccaaccatgc acccggcagc ggtaaggcag accaacaggg
     1561 cgacagcgaa acccggacgc ctcattccgc cgctccaggc gtcggtgcgg ttccggacag
     1621 gccggggaac atccggtgga accaccgcag cgcccatagg cggaagcgat cgaggtaaag
     1681 atacagcacc ggcgtggtgt acagcgtgag caattgactc agcagcaacc cgccgacaat
     1741 tgaaataccc agcggacgcc gcagttcgcc gccatcaccg aaactcaatg ccaaaggtaa
     1801 cgctcccaga atggccgcac tggtggtcat catgatcggg cggaatcgca gccggcaggc
     1861 ctcgaagatt gcatcgcgcg gtgtcatgtt gtgcgaacgt tccgcttcca gcgcgaagtc
     1921 gatcatgaga atggcattct ttttcacaat gccgatcagc aagatcacgc cgatcaacga
     1981 aatgatgctg aattcaatgt tgaacgcgag cagcgccagc accgcaccga cgccggccga
     2041 gggcaaggtc gaaatgatcg tgatcgggtg aatatagctc tcgtacagca cgcccaatcc
     2101 gatatagacg gcgatcagcg cggcggcgat cagcaccggt tcgctgttca ac
//
LOCUS       DATAVD010001176         2255 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3274767, whole genome shotgun sequence.
ACCESSION   DATAVD010001176 DATAVD010000000
VERSION     DATAVD010001176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2255
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3274767"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..799
                     /locus_tag="VHX39_22395"
     CDS             <1..799
                     /locus_tag="VHX39_22395"
                     /inference="COORDINATES: protein motif:HMM:NF014325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HEX3993931.1"
                     /translation="VAVGALSAELAALATLIAAASMLATPVLFALSERFLIPHLRRAP
                     APQYDTIEPSDAQVIIAGFGRMGQIVGRVLRMHGIAFTALERDPGQVDVVRRFGNKVY
                     YGDAARPDVLRAAGADRAKLLIVALDDMDRNLRTVETAKRNHPNLTILARARNRHHAF
                     LLMDRDVDGLVRDTFHSSLRLAELSLTALGVTSEAAERAVTFFRDHDEANLVATHAIY
                     RDEKQLIQNLQQATDELNALFDADREPADATGAAQRITDRSEVGRPA"
     gene            complement(823..2208)
                     /locus_tag="VHX39_22400"
     CDS             complement(823..2208)
                     /locus_tag="VHX39_22400"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX3993932.1"
                     /translation="MTIAETLATRIAGVTYQTLPDEARHWAKVAIMDTVGCILAGAEE
                     PCARIAGRVASIGGANGPCVVFGTSHRVGPMDAASINGTAAHALDYDDCSDTLGGHPS
                     APILPALFALAETRETNGRDFIAAYVAGWEAETRIARGINFHHYEKGWHPTATIGVFG
                     ATAACAKLLGLSVEKTARALALAATFSSGLKANFGTMTKPLHVGQAARNGLYAALLAS
                     EDFTASTDAIEHRQGFLRVFNGEGNFTIDPIIAEWGSPWDIVDPGLTIKQYPCCGSTH
                     PAVDAMLMLVRENHLTPAMVSRIESQTHPRRFAHTNRPNPRGALDAKFSVQYCLARAL
                     VSGQVLIEHFEDGSYDEPEVRQVLSRVESSAWPDRPMDLSEHFGADVKVTLTDGRVLT
                     KSVPRPLGRGPSIPLPPSLLRGKFIDCAGRVLPADAANALHGLLDRLETVNQIHTLTE
                     ATIPRTALAAD"
BASE COUNT          410 a          716 c          709 g          420 t
ORIGIN      
        1 ggtggcggtg ggggccctct cggccgaact tgcagcgctg gcaacgttaa tcgccgccgc
       61 ctcgatgctc gcgaccccgg tgctgtttgc gctgtccgaa cggttcctga ttccgcattt
      121 gcggcgcgct cccgcaccgc aatacgacac gatcgagccg tcggacgcgc aagtcatcat
      181 tgccgggttc ggccgcatgg gtcagatcgt gggccgggtg ttacggatgc acgggatcgc
      241 cttcaccgcg ctggaacggg atcccggcca ggtggatgtt gtgcgtcgct tcggcaacaa
      301 ggtttattac ggcgatgcag cgcggccgga cgtgttgcgg gcagccggcg cggatcgtgc
      361 aaaactgctg atcgttgcgc tggacgatat ggaccgcaac cttcgaactg tggaaaccgc
      421 caaacgcaat catccaaatt taaccatcct ggcccgtgcc cgcaatcggc accatgcgtt
      481 cttgttgatg gatcgcgacg tggacggtct ggtgcgggac acgttccatt ccagtctccg
      541 cctcgccgaa ctcagcctga cggcgctggg tgtgacgtcg gaggcggcgg agcgggcagt
      601 cactttcttc cgcgaccatg atgaggcgaa tctggtcgcc acacatgcaa tctatcgcga
      661 cgagaaacaa ttgatccaaa atctgcagca ggccacggac gagctgaacg cattgttcga
      721 cgccgaccga gagcccgccg atgcaaccgg cgcggcacaa cggatcaccg atcggtcaga
      781 agtcggacga ccggcctgaa ccgccgcatg ggctgcgccg cgtcaatccg cggccagcgc
      841 tgtgcgggga atggtcgctt cggtcagcgt gtggatttga ttgaccgttt ccagtctgtc
      901 caacaagcca tgcagagcat tggccgcgtc agccggcagc actcgtcccg cgcaatcgat
      961 gaacttgccg cgcagcaacg atggcggcag cggaatggat ggtccccggc ccaaaggccg
     1021 cggcaccgat ttggtcagta cccgcccgtc ggtcagtgtc actttgacat ccgcaccgaa
     1081 atgctcggac agatccatcg gccgatccgg ccatgccgag gactcgacgc gcgacaacac
     1141 ctgccgcact tcgggttcat cgtagctgcc gtcctcgaaa tgttcgatca gcacctggcc
     1201 gctgaccagt gcacgcgcga ggcagtactg cacgctgaac ttggcatcca atgcaccgcg
     1261 cggattgggc cgattggtgt gtgcgaaacg tctcggatgg gtctgcgatt cgatacggct
     1321 gaccatcgcc ggtgtgaggt ggttctctct caccaacatc aacatggcgt cgaccgcggg
     1381 atgagtgctg ccgcagcacg ggtattgctt gatggtaagc ccaggatcga cgatgtccca
     1441 gggcgagccc cattcggcga tgatcggatc gatggtgaaa ttgccctcgc cgttgaacac
     1501 gcgcaggaag ccttgccggt gttcgattgc gtcggtcgag gcggtgaagt cctccgacgc
     1561 cagcaacgcg gcgtacaagc cgttgcgcgc tgcctggcca acatgcagcg gtttcgtcat
     1621 cgtgccgaaa ttcgccttca ggccggagga gaacgtcgcc gccagtgcca gtgccctggc
     1681 ggtcttttcc accgataggc caagcagctt cgcacacgct gccgtggcgc cgaacacgcc
     1741 gatggtggcg gtgggatgcc agcccttctc gtaatgatgg aaattgatgc cgcgggcgat
     1801 ccgggtttcc gcttcccacc ctgccacata cgcagcgatg aagtcgcggc cgttggtttc
     1861 gcgcgtttca gccagcgcga acaacgccgg caggatcggc gcagacggat gcccgcccaa
     1921 ggtgtcgctg caatcgtcat agtccagggc atgcgcggcg gtaccgttga tcgaagcggc
     1981 gtccattggt ccgacgcgat gcgacgtccc gaataccacg cagggaccat tggccccgcc
     2041 gatcgaggca acccggccgg caatacgcgc acacggctcc tctgcgccgg ccagaatgca
     2101 gccgaccgtg tccatgatcg cgaccttggc ccaatgccgc gcctcgtccg gcagagtttg
     2161 gtaagtgacg ccggcaatgc gcgtggccaa tgtttcagcg atggtcatgc aagtgctccc
     2221 tggtccgctc ggtctgtcgg ctccctctat aaccc
//
LOCUS       DATAVD010001177         3135 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1414105, whole genome shotgun sequence.
ACCESSION   DATAVD010001177 DATAVD010000000
VERSION     DATAVD010001177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3135
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1414105"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..397)
                     /locus_tag="VHX39_22405"
     CDS             complement(<1..397)
                     /locus_tag="VHX39_22405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase"
                     /protein_id="HEX3993933.1"
                     /translation="MTPADFKVLSFDCYGTLIDWETGILTALRPLLSRAGVALGDDAI
                     LAEFAAHESAQQATAPDMPYAEVLTRVHAQLADAWDVADDPAEDARFGASVGDWPAFS
                     DTVTALRMLQQRYRLVILSNVDRHSFQTTQ"
     gene            complement(394..1125)
                     /gene="otsB"
                     /locus_tag="VHX39_22410"
     CDS             complement(394..1125)
                     /gene="otsB"
                     /locus_tag="VHX39_22410"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004805 - trehalose-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HEX3993934.1"
                     /translation="MTHDTLPPYRDAALLLDLDGTLLDFAATPETVVVPAGLPDALRT
                     IRDQLGGALAVVTGRTIAIIDTLLGDVPLAVAGEHGGAVRRSPGAAIERPDLKSPPQH
                     WLERGAMLETAHPGSRFEPKPRGFGMHFRLAPDSGPAIHAALSDMIAESEDFHLLSGQ
                     MMWEIRPRGVDKGHGVERLMQQSPFHGRVPVFIGDDVTDEDGLRVARAMGGAGLWVPD
                     LFGNAAGVRAWLQATAARGDWAPLP"
     gene            complement(1122..1859)
                     /locus_tag="VHX39_22415"
     CDS             complement(1122..1859)
                     /locus_tag="VHX39_22415"
                     /inference="COORDINATES: protein motif:HMM:NF021444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2155 domain-containing protein"
                     /protein_id="HEX3993935.1"
                     /translation="MRRLLLGGLLAFLPLTLLAQPLDQRASRSGSFAQTPGNSRVVVM
                     PPPSAQAPQTPDDGTVTQMPDPDDQTQPPNDTVTATPPQNNPSDQAPLDNSVISTPLP
                     PAPPPDDQTDTTQQLVPNPSDTENNPPVPGTTKQAAQPQGQPVAGGWVKMGSATLQAL
                     DKVNAVEKTLVVKVGDTGRFASLDIAVRGCFVRPPDKPADATAFLVINDQRADTPAFN
                     GWMVRSAPYLSMMAHPLYDVRIAGCSP"
     gene            complement(1856..2077)
                     /locus_tag="VHX39_22420"
     CDS             complement(1856..2077)
                     /locus_tag="VHX39_22420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993936.1"
                     /translation="MIPHPPATWPGDDGNPLSCRDKLKVLAENHAELAQMLQDTFEDA
                     VLMGVDESAMRGILADMIKGLESPKRTGQ"
     gene            complement(2074..2595)
                     /gene="mlaD"
                     /locus_tag="VHX39_22425"
     CDS             complement(2074..2595)
                     /gene="mlaD"
                     /locus_tag="VHX39_22425"
                     /inference="COORDINATES: protein motif:HMM:TIGR04430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015914 - phospholipid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HEX3993937.1"
                     /translation="MANRGFGEVLTGAAVLLVAAGFLGFAVAHSGRTAATGYKLHASF
                     DRIDGLSAGADVRIAGVKVGNVLDTRVDPKSFLAEVTLSVGDQIHLPKDSSAEVTSES
                     LLGGKFLNLSPGGDTQEIPPGGTITITQSSINLEQLLGKFIFSAASLTDKGGSNTSGP
                     EQKPGDAKPEAPK"
     gene            complement(2601..2993)
                     /locus_tag="VHX39_22430"
     CDS             complement(2601..2993)
                     /locus_tag="VHX39_22430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0010257 - NADH dehydrogenase complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone oxidoreductase subunit NDUFA12"
                     /protein_id="HEX3993938.1"
                     /translation="MDQRPTHAYMSSMHLGTWLLTRFKGHLVGTDGAGNNYYEERAVR
                     PSGRARRWIMYNGPVEASAVPPEWHAWLHYTTEKPIQESARRPWSKAHIPNQTGTPAG
                     YRPPGHDYEGGKRDHATGDYEAWTPGSE"
BASE COUNT          564 a          983 c          980 g          608 t
ORIGIN      
        1 gttgggtagt ctggaagctg tgccggtcga cgtttgaaag tatcaccagg cgatagcgct
       61 gttgcaacat ccgaagcgcc gtaacggtat cggagaacgc cggccagtcg ccaacggaag
      121 ctccgaaccg tgcgtcttcc gccggatcat ccgcgacgtc ccaggcgtcg gccagttgcg
      181 catgcacccg ggtcagcacc tcggcatacg gcatgtccgg cgccgtcgcc tgttgcgccg
      241 actcatgggc agcgaattcg gccagtatgg catcgtcacc caacgcgacg ccggctcggc
      301 ttagcaacgg acgcagcgca gtcaggatgc cggtttccca gtcgatcaag gttccgtaac
      361 aatcgaaact caatactttg aagtctgccg gtgtcacggc agaggcgccc aatcgccgcg
      421 tgctgcggtg gcttgtagcc aggcacgcac gccggcggca ttgccaaaca ggtccggcac
      481 ccacaatccg gcaccgccca tggcgcgagc gacacgcagc ccgtcctcat cggtgacgtc
      541 gtcaccaatg aacaccggca cacggccatg aaacggcgac tgctgcatca gccgctccac
      601 cccgtggccc ttgtcgacgc cgcgcggccg aatctcccac atcatttggc ccgacaacag
      661 atgaaaatcc tcggactcag cgatcatgtc cgatagtgcc gcatggatgg ccggcccgga
      721 gtccggggcc aatcggaaat gcatgccgaa gccacgcggc tttggctcga accggctgcc
      781 gggatgcgcc gtttccagca tggcgccacg ttcgagccaa tgttgcggcg gcgacttcag
      841 atcgggacgt tcgatcgcag cgcctgggct gcgccgaacc gcgccgccat gctcgccggc
      901 gacggcaagt ggcacgtcgc ccagaagcgt atcgattatc gcaatggttc gcccagtgac
      961 cacggcgagc gcgccgccaa gctgatcccg gatggtccgc aacgcatccg gcaggccagc
     1021 cggcacgacg actgtctcag gcgtcgccgc aaaatccaac aacgtaccgt ccaggtcgag
     1081 cagcagcgct gcatcccggt acggcggtaa ggtgtcgtgt gtcacggcga acatcctgcg
     1141 atacgaacgt cgtagagtgg atgggccatc atcgacaaat atggcgcaga ccgaaccatc
     1201 cagccgttga acgcaggtgt gtcggcgcgt tgatcgttga tgaccaggaa ggccgtcgcg
     1261 tcagctggct tgtccggcgg acgaacgaaa caacctcgca cggcgatgtc cagcgaagcg
     1321 aaccgcccag tgtcacccac cttgaccacc agggtttttt cgacggcgtt gaccttatcc
     1381 agggcctgca acgttgcact gcccattttc acccatccgc ccgcaaccgg ctggccttga
     1441 ggctgcgccg cctgcttggt cgtgccagga accggcggat tattttcggt gtcagatggg
     1501 ttggggacca gttgttgtgt cgtatccgtc tgatcgtctg gcggtggtgc cggcggcagc
     1561 ggcgtggaga tgaccgaatt gtccagcggt gcctgatcgg acgggttatt ttgcggcggc
     1621 gtggcggtca ccgtgtcatt cggcggttgc gtctggtcat ctggatcggg catttgcgtc
     1681 acggtgccat cgtccggggt ttggggtgcc tgcgcgctcg gaggtggcat caccacgacc
     1741 ctgctgttgc ccggcgtctg tgcgaatgag ccgcttctcg atgcccgctg atccaggggc
     1801 tgcgccaaca gcgtcagcgg caagaacgcc aacagcccac ccagcaacag ccgcctcatt
     1861 ggccggtgcg cttcggcgac tcaaggccct ttatcatgtc ggccaggatg ccgcgcatcg
     1921 cggattcatc gacccccatc aggaccgcat cctcaaacgt gtcctgcagc atctgtgcga
     1981 gctccgcatg attttccgcc agaactttga gcttgtcgcg gcatgataac gggttgccgt
     2041 catcgccggg ccaggtcgca gggggatggg ggatcatttc ggcgcctccg gcttcgcgtc
     2101 tccaggtttt tgctcaggcc cgctagtgtt gctgccgcct ttgtcggtca atgaggcggc
     2161 gctgaaaatg aatttgccga gaagttgctc gagattgata gaagactgag tgatcgtgat
     2221 tgttccgccc ggcggaatct cctgagtatc gcctcctggg ctcaggttca gaaacttgcc
     2281 gccaagcagg ctttcactgg tgacctcggc ggaggagtcc ttgggtaaat ggatctggtc
     2341 gccgaccgac aaagtaactt cggcgagaaa cgacttcggg tcgacgcgcg tgtccaggac
     2401 gttgccgacc ttgaccccgg cgatccggac gtccgccccc gcgctgagcc cgtcgatccg
     2461 atcaaagctg gcgtgtagct tataaccggt agcagcggtg cggccggaat gcgccacagc
     2521 gaaaccgagg aagccggcgg cgaccagcaa gaccgctgcg ccggtcagaa cctcgccgaa
     2581 gcctcggtta gccattgccg ttactcgctt cccggcgtcc aggcttcata gtcgccggtc
     2641 gcgtgatccc gcttgccacc ctcataatcg tgtcccggtg ggcggtagcc ggcgggggtg
     2701 ccggtctgat ttggaatgtg cgccttgctc catggccggc gcgctgattc ctggatcggc
     2761 ttttcggtgg tgtaatgaag ccacgcgtgc cactcaggtg ggacggcgga cgcttcgact
     2821 ggtccgttat acatgatcca ccggcgcgcg cggccactgg ggcgaacggc tcgctcctca
     2881 tagtaattgt tgcccgcccc gtcagtgccg acgagatggc ctttgaagcg ggtcaggagc
     2941 caggtgccga gatgcatgct ggacatatag gcgtgcgttg gccgctggtc cactatcgga
     3001 ttacccacag gattttgtgg tccgaggtgc gatttcttac aaaatgtgct tttcagcccg
     3061 attcgatcgg cataccgtca gattatgaga gttcatcgga cctggcacgg cacccgcaca
     3121 cgacgcatcg agatt
//
LOCUS       DATAVD010001178         2045 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_117226, whole genome shotgun sequence.
ACCESSION   DATAVD010001178 DATAVD010000000
VERSION     DATAVD010001178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117226"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..384)
                     /locus_tag="VHX39_22435"
     CDS             complement(<1..384)
                     /locus_tag="VHX39_22435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEX3993939.1"
                     /translation="MNVLAPPKARLSVEIVYDLICPWCYLGVRRLLRTFRRRPDLLFD
                     LNWRPFLLNPDMPRAGMARPDYVIRKFGGEDRAKRLYASITDLGRREGVAFAFERIRR
                     TPSSIDAHRLVRFAARYGRADAMVEA"
     gene            537..815
                     /locus_tag="VHX39_22440"
     CDS             537..815
                     /locus_tag="VHX39_22440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993940.1"
                     /translation="MENLQSTIDMVLRLLTQFGLAVAAMLTGLELWLRAELQQAGVPH
                     TVQTPILLVVAALLIVGALRLFGGLIRVAAVLILVLIAIDIVMPVVQG"
     gene            complement(971..>2045)
                     /locus_tag="VHX39_22445"
     CDS             complement(971..>2045)
                     /locus_tag="VHX39_22445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993941.1"
                     /translation="RIHYLAFHLASTRVPAFPYNDNAEQIPPVAPQWMTARALPDWPS
                     GAFSDKELIEHARIAIDEFHTAIKLDENNALAQLGIASLEEEFLVWRTQQNLVSLPSE
                     LVGITPSVVRADYARTLQLALPNDAKERFIPPEGLPGLVSYEAASALVRLANDSKAAL
                     TNQEREEVKQAGVVLEHLTSLKQGLVTPIVFSFRPAAHLDALLAPDTQVDFDLRGYGA
                     QEQWSWVKPELGLLVWDPACSGQIRSARQLFGGYTFQIFRDNGYDALAALDDNLDGVL
                     SGHELDGISVWFDRNGDGVATPDEVVPLPDLGVIAIAVTMDGHDGIYPTNARGITFRN
                     GRTLRTWDWIAIPLRQTTTAIGR"
BASE COUNT          400 a          577 c          669 g          399 t
ORIGIN      
        1 ggcttcgacc atggcgtcgg ctcggccgta gcgggcggca aagcgtacca ggcggtgggc
       61 atcgatcgag gatggggtgc ggcgaatgcg ctcgaacgcg aaggcgacac cctcgcggcg
      121 gccgaggtcg gtgatcgagg cgtagaggcg tttcgctcgg tcctcgccgc cgaatttgcg
      181 gatgacgtag tcggggcgag ccatgccggc gcgtggcatg tcggggttga gcaggaaggg
      241 acgccagttg aggtcgaaca acaggtcggg gcggcggcgg aacgtgcgca acaggcggcg
      301 gacgcccaga tagcaccagg ggcagatgag atcgtagacg atctcaaccg agagccgggc
      361 ttttggtggc gcgaggacgt tcacggaagg attttcgcgc gaaacgaggc gattgtcacg
      421 gggagagtga ggggaagggg tatcagggca gcgtcgcgga acccggccgc gcggatcccg
      481 ttggtcgtag tcgtgctgcc ggaaccgctg ccaagacatt ccccgaggaa atcaacgtgg
      541 aaaatctgca atcaaccatt gatatggtgc tcaggctgct tacacaattc ggccttgccg
      601 tggcggcgat gctgactggg ctggaactgt ggttgcgcgc ggaactccag caggcgggcg
      661 tgccgcatac ggttcaaacg ccgatcctgc ttgtcgtggc ggcgttgctg atcgtgggcg
      721 cactccgtct gttcggtggc ctgatccgcg ttgcagcggt gcttatcctg gtgctgatcg
      781 ccatcgacat cgtgatgccg gttgtccagg gttgacccgt cgtctggtgg ggctggtgga
      841 aagaggccgg acaccagctt cgatcacgac cgcacattca ggacgcgcgg ccgcaaggtg
      901 accgccaggc acgatcgttg tctcggactg aatcgcgccc gatcccgccc tcagtgcaga
      961 gccatcgcta tcaccggcca atcgcggtcg tggtttgtct tagcggaatc gcgatccagt
     1021 cccaggtgcg caacgttcgg ccattgcgaa acgtgattcc acgcgcattg gtcggataaa
     1081 tgccgtcgtg accatccatc gtgaccgcga ttgcaatgac gcccagatct ggcaacggaa
     1141 cgacctcatc aggcgttgcg acaccatcgc cgttgcggtc gaaccagacg ctgatgccat
     1201 cgagttcgtg gccggaaagc acgccgtcca ggttgtcgtc gagtgcagcc agcgcatcgt
     1261 agccattgtc acgaaagatt tggaacgtgt atccgccgaa cagttgccgc gccgagcgaa
     1321 tttggccaga gcaggcgggg tcccagacca gcagaccgag ttcaggcttc acccaggacc
     1381 attgctcctg tgcgccgtat ccacgcagat cgaagtccac ctgtgtgtct ggagcaagca
     1441 gcgcatcgag atgggcggcg ggtcggaaag aaaatacgat aggggtgacc aagccttgct
     1501 ttaacgacgt taaatgctca agcacgactc ccgcttgctt cacctcctcg cgttcctggt
     1561 ttgtcagggc cgctttactg tcgttggcaa gtcgaaccaa tgcactcgcc gcctcataag
     1621 atacgagtcc tggcaggcct tcgggtggaa tgaatcgctc tttggcgtcg ttgggcagcg
     1681 cgagttgcag cgttctcgca tagtctgcac gcacaaccga aggggtgatg ccgaccaatt
     1741 cggagggcag cgacaccagg ttctgctgcg ttcgccagac caggaactcc tcctccaacg
     1801 atgcaatgcc aagctgtgcc agcgcgttat tctcatcgag tttgatagcc gtatggaatt
     1861 cgtcgatcgc tattctggca tgctcaataa gttccttgtc ggagaaagcg cctgatggcc
     1921 aatccggtaa tgcccgggct gtcatccatt gtggcgcgac cggaggaatc tgctccgcat
     1981 tgtcgttgta cgggaacgcc ggcacccgag tacttgcgag atgaaaggcg aggtaatgaa
     2041 tccgt
//
LOCUS       DATAVD010001179         4199 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1788336, whole genome shotgun sequence.
ACCESSION   DATAVD010001179 DATAVD010000000
VERSION     DATAVD010001179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4199
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1788336"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..272)
                     /locus_tag="VHX39_22450"
     CDS             complement(<1..272)
                     /locus_tag="VHX39_22450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HEX3993942.1"
                     /translation="MKFLSYLRLRTKLTLLIGLSALAVIASIGLAASQLQRRMLDDRI
                     DKLRAATQMTIGLAKSLEQQVAAGKLTHEAAVAQLAAAAHVMHFDDG"
     gene            535..>4199
                     /gene="gltB"
                     /locus_tag="VHX39_22455"
     CDS             535..>4199
                     /gene="gltB"
                     /locus_tag="VHX39_22455"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HEX3993943.1"
                     /translation="MNEVVRQGLYDPRNEHDACGVGFVVNIKGRKTHDIITQGLKILQ
                     NLDHRGAVGADPSMGDGAGCLIQMPDSLLADWARSAGKSLPRPGRYAVAMCFLPREEK
                     ARTYAVERVEHVVAQEGQKMVGWRDVPTDLTGLGEAVIESMPVIRQAIIEASPSIRDQ
                     DAFERKILAIRKQILNNIRAMAERNALPGLSELYMPSFSSRTMVYKGLLLATQVGAFY
                     QDLQNPLTQSALALVHQRFSTNTFPSWKLAHPYRFLAHNGEINTVRGNVNWMYARRRS
                     MESALIGPDLDKMWPIIPHGQSDTACIDNALEILVAGGYSLAHAMMLLIPEAWAGNPL
                     MDPERKAFYEYYAALMEPWDGPAAIAFTDGRQIGATLDRNGLRPARYIVTDDDHVIMA
                     SEAGVLPVPEERIIRKWRLQPGKMLLIDLEQGRIIDDDEVKKELSAKYPYAEWLKETQ
                     FKLEDLPDTERRGLPRPNDLEVLHQQQNAFGYTQEDIQFFLEPMARDGDDPIGSMGTD
                     TPLAVLSDKAKLLYNYFKQNFAQVTNPPIDPIREELVMSLVSMIGPRPNLLGHHAGNH
                     YRLEVSQPILTNGDLEKIRDIESLAGGAFRTQTIDTTWPAGEGAEGMERAVERVCREA
                     TDAVLADYTILILSDRGVSPDRIPIPALLATAATHHHLIRQGLRTQTGLVIETGEARE
                     VHHFCVLAGYGAEAINPYLAFETLELIRTKGNSTISAYDARKNYLKALSKGIMKVMSK
                     MGISTYHSYCGAQIFDAVGLSSAFVEKCFTGTATTIEGVGFKEIAEEAVTRHRNAYGD
                     SPLYRSMLDVGGDYQFRLRGETHAWTPESIGRLQHSVRGNSYEGFKEFTRSINDQSER
                     LLTLRGLMAFASEQDPVPLDEVEPAAQIVRRFATGAMSFGSISREAHTTLAIAMNRIG
                     GKSNTGEGGEESDRYIPMANGDSMRSAIKQVASGRFGVTTEYLVNADDLQIKMAQGAK
                     PGEGGQLPGHKVDRNIARVRYSTPGVGLISPPPHHDIYSIEDLAQLIHDLKNANPKAR
                     ISVKLVSEVGVGTVAAGVSKARADHVTIAGYEGGTGASPLTSLTHAGSPWEIGLAETQ
                     QTLVLNGLRGRIAVQVDGGFRTGRDVVIGALLGADEFGFATAPLIAAGCVMMRKCHLN
                     TCPVGVATQDPVLRKRFTGTPEHVINFFFFIAEEVREIMAQLGFRSFNEMIGRVDRLD
                     TRRSVEHWKAKGVDLSRV"
BASE COUNT          838 a         1294 c         1307 g          760 t
ORIGIN      
        1 ccgtcatcga aatgcattac gtgggcggcg gcggcgagtt gcgcgacggc ggcttcgtgc
       61 gtcagcttgc cggcggcaac ctgttgctcc agcgatttcg ccaggccaat cgtcatctgc
      121 gtcgccgcac gcaacttatc aatgcgatcg tccagcattc gccgctgcaa ctgcgatgcg
      181 gcgagaccga tcgaagcaat taccgcgaga gccgacagcc caatgagcag agtcagcttc
      241 gtgcgaagcc ggaggtagct gagaaatttc atgcagcctg ttccttaggg acgctggtgc
      301 gaaccgcggc ctgcgttcaa gcactaatac attaatgaga cgtgaaaccg ctcgcccgca
      361 cggcggcaga cggcttgaac agaacccgcg ccggcccgga cccggcagcc catgcccacc
      421 ttctgcgcgc ttcgctgcac tgcggcagga ttattgccat ttcgccagag gtgttgcact
      481 gtgcccatcc tgcggcatcc tcgccgcgtc caacccgcat ccgagacgac gaacatgaat
      541 gaggttgtga gacaaggcct gtacgaccca cgcaacgagc acgacgcctg cggtgtcggc
      601 ttcgtcgtga acatcaaagg ccgaaaaact cacgatatca tcacccaggg cctgaagatc
      661 ctgcagaacc tggaccaccg aggcgccgtc ggagccgatc cctcgatggg cgacggtgcc
      721 ggctgcctga tccaaatgcc tgattctctc ctcgccgact gggcgcgctc cgccggcaag
      781 agcctgccca gaccgggccg ctacgcggtg gcgatgtgct tcctgccacg tgaggaaaaa
      841 gcccgcacct acgcggtcga acgcgtcgaa catgtcgtgg cgcaggaagg ccagaagatg
      901 gtcggctggc gcgacgtgcc gaccgacctg accggcctcg gcgaggcggt gatcgaaagc
      961 atgccagtca tccgccaggc catcatcgag gccagcccat ccatccgcga ccaggacgcg
     1021 ttcgagcgca aaattctggc catccgcaag cagatcctga acaacatccg cgccatggcc
     1081 gagcgcaacg cgctacccgg cctgagcgaa ctatatatgc cgtcattctc cagccggacc
     1141 atggtttata agggcctgtt gctggcaacc caggtcggtg cgttctacca ggacctgcaa
     1201 aacccgctga cccagtcggc attggcgctg gtgcatcaac ggttctccac caataccttc
     1261 ccgtcctgga agctggccca cccgtaccgg ttcctcgcgc ataacggcga gatcaatacc
     1321 gtccgcggca acgtgaactg gatgtatgcg cggcggcggt cgatggaatc ggcgctgatc
     1381 gggcctgacc tcgacaagat gtggccgatc attccgcacg gccagtcaga caccgcctgc
     1441 atcgacaacg cgctggaaat cctggtcgcc ggcggctact cgctggcgca tgcgatgatg
     1501 ttgctgatcc ccgaggcctg ggccggcaac ccgctgatgg atccggagcg caaggcgttt
     1561 tacgagtatt acgccgcgtt gatggaaccg tgggacgggc cggcggcaat cgctttcacg
     1621 gatgggcggc agatcggggc cacgttggat cgcaacgggc tgcggccggc gcgctatatc
     1681 gttaccgatg acgatcacgt gatcatggcc tcggaagccg gcgtgttgcc ggttcccgag
     1741 gaacgcatca tccgcaaatg gcgtttgcag cccggcaaga tgctgctgat cgacctggaa
     1801 caaggccgta tcatcgacga cgacgaggtc aagaaggaac tctcggccaa gtatccctac
     1861 gcggaatggc tgaaggaaac ccagttcaag ctggaggacc tgccggatac cgagcggcgt
     1921 ggcctgcccc ggccgaacga ccttgaggtg ctgcatcagc agcagaacgc cttcggttat
     1981 acgcaggagg acatccagtt cttcctggaa cccatggcgc gcgatggcga cgatccgatc
     2041 ggctcgatgg gcaccgacac gccgctggcg gtgctgtccg acaaagcgaa gttactgtac
     2101 aactacttca agcagaactt cgcccaggtc accaatccac cgatcgatcc gatccgcgaa
     2161 gaactggtga tgtcgctggt ctcgatgatc gggccgcggc cgaatttgct gggccatcat
     2221 gccggcaatc actaccggct ggaggtttcg caaccaatcc tgaccaatgg ggacctggag
     2281 aagatccgcg acatcgagag cctcgccggt ggcgccttcc gcactcagac catcgacacc
     2341 acctggcctg ccggcgaagg tgccgagggg atggagcgcg cggtcgaacg cgtttgccgc
     2401 gaggcaaccg atgccgtgct cgccgattac acgatcctga ttctgtcgga tcgcggggtc
     2461 agcccggacc gcatcccgat cccggcgctg ctcgccacgg cggcgacgca tcatcatctg
     2521 atccgtcagg gattgcgcac gcaaaccggc ctggtgatcg aaaccggtga ggcgcgcgaa
     2581 gtgcatcact tctgcgtgtt ggccggctat ggcgccgagg cgatcaatcc atatctggcg
     2641 ttcgagacgc tggagctgat ccggaccaag ggtaattcca cgatttctgc gtatgacgcg
     2701 cgcaagaact acctcaaggc gctgagcaag ggcatcatga aggtgatgtc caagatgggc
     2761 atttccacat atcattctta ttgcggcgcg cagatcttcg acgccgttgg tctgtcttcg
     2821 gcgtttgtgg aaaagtgctt caccggcacg gcgacgacga tcgagggcgt cgggttcaaa
     2881 gaaatcgccg aggaagcggt tacccggcat cgcaatgctt acggcgacag cccgttatat
     2941 cgctcgatgc tggatgtcgg cggcgactat cagttccggc tgcgtggcga aacccacgcc
     3001 tggacgccgg aatcaatcgg ccggctgcaa cattccgtgc gcggcaattc ctatgagggt
     3061 ttcaaagagt tcacccgcag catcaacgat caaagcgagc ggctgctgac cttgcgcggc
     3121 ctgatggcgt tcgcttccga gcaggacccg gtgccgttgg atgaagtgga accggcagca
     3181 cagatcgtcc gtcgtttcgc cactggtgcg atgagcttcg gctcgatttc gcgtgaggcg
     3241 cacaccacgc tggcgatcgc catgaatcgc atcggcggca agtccaacac cggtgagggt
     3301 ggcgaggagt cggatcgtta cattcccatg gccaacggcg attcgatgcg atcggcgatc
     3361 aagcaggttg cctcgggccg gttcggtgtg accacggaat atctggtgaa tgccgacgat
     3421 ttgcagatca agatggcgca gggtgccaag cccggcgaag gcgggcagtt gccgggccac
     3481 aaagtggacc gcaacatcgc ccgggtgcgt tactcgacgc ccggtgtggg tttgatttca
     3541 ccgccgccgc atcacgacat ttattccatc gaggatctgg cgcagctgat ccacgatttg
     3601 aagaatgcca acccgaaagc gagaatttcg gtaaaactgg tgtccgaggt cggtgtcggc
     3661 accgtcgcgg ccggagtgtc gaaagcgcgg gccgatcacg tcacgattgc aggttacgag
     3721 ggcggcacgg gggcttcgcc gctgacctcg ctgacacacg ccggatcgcc atgggaaatc
     3781 ggcctcgccg agacacagca aactttggtg ctgaatggtt tgcgcggacg gattgcggtg
     3841 caggtcgatg gcggtttccg caccggccgc gatgtcgtga tcggtgcgct tctgggcgcc
     3901 gacgagttcg gttttgccac tgcgccgttg atcgccgccg gctgcgtgat gatgcgcaag
     3961 tgtcacctga atacctgccc ggtcggggtc gcgacgcagg atccggtgct gcgcaagcgg
     4021 ttcaccggaa cgccggaaca cgtcatcaac ttcttcttct tcatcgccga agaagtccgc
     4081 gaaatcatgg cgcaactcgg cttccgctcg ttcaatgaaa tgatcggacg ggtcgaccgg
     4141 ctcgacacgc gccgctcggt cgagcactgg aaagcgaagg gcgtcgatct cagccgcgt
//
LOCUS       DATAVD010001180         3306 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3088758, whole genome shotgun sequence.
ACCESSION   DATAVD010001180 DATAVD010000000
VERSION     DATAVD010001180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3306
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3088758"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            96..452
                     /locus_tag="VHX39_22460"
     CDS             96..452
                     /locus_tag="VHX39_22460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HEX3993944.1"
                     /translation="MELTALNEPLMVTDSNVGQSSFSGVAMHGVRFEDARMTAARFDH
                     VDLAGAVVSRARLAAARFSNVDLSGVHVENAMLVGATIRDANLSGVAISDCDTSDMRI
                     NGYLVSDLIAAYRKNQ"
     gene            452..2479
                     /gene="nuoG"
                     /locus_tag="VHX39_22465"
     CDS             452..2479
                     /gene="nuoG"
                     /locus_tag="VHX39_22465"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HEX3993945.1"
                     /translation="MPKLTIDGIEVEVPPGSTVLQAAEAAGLEIPRFCYHDRLSIAGN
                     CRMCLVEIEKTPPKPISSCTYPVAEGMVVHTDTPMVRNGRRGVMEFLLINHPLDCPIC
                     DQGGECDLQDQAMGYGMDHSRFAENKRAVKDKELGPLVATSMNRCIHCTRCIRFISEV
                     AGVPDLGATARGEHMEVGTYVEKALSSELSANIIDLCPVGALTSKPYAFTARSWELSK
                     TDSIDVLDAVGANIRVDTRGPEVLRILPRLNEDVNEEWLGDKSRFSVDGLKRRRLDKP
                     WVRRDGKLQPASWQHAFDAIAAKLHGLTGEKIGAIAGDLCDAESMLALKDLMAALGSA
                     NLDCRQDGAQLTNARRDYYTFNTQIAGIEDADAILIVGSNPRREAPVLNARIRKAWHQ
                     NGARIGLIGAETDLTYPLTHLGTGPAAFADGETFLTNAKHPMVIVGQGALRRPDGAAV
                     LAAAWAIAARAGALTAEWHGFNVLHTAAARVGALDLGFLPGPQGKSLDAMLNLDVLWL
                     LGADEFDTKRIGPETFVIYQGHHGDAGAARADVILPGAAYTEKPGTYVNTEGRVQRGF
                     MATHPPGEAREDWKILRAFSARIGHTLPYDTIEALRTRLEQINPVFANIGFLPRFGCT
                     DTTGPSGGTVTDAPFQPVIRHYHQTDPISRASPTMAACVAALEPTPAMAAE"
     gene            2485..>3306
                     /locus_tag="VHX39_22470"
     CDS             2485..>3306
                     /locus_tag="VHX39_22470"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003620724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HEX3993946.1"
                     /translation="MIPWLTDFLLHNPVGIVILTVLEALALLVPVLIAVAYLTYAERK
                     VLAAIQLRKGPNVVGPFGLLQPFADAIKMITKETIIPSGANRVLFIMAPMLTFVLAML
                     AWAVIPVNDGWAIADINVGVLYLFAISSLGVYGIIVAGWASNSKYAFLGALRSAAQMV
                     SYEVSMGFVLVTVLLCAGSLNLTTIVLAQQKIWYCIPLFPMFIIFFISALAECNRAPF
                     DLAEGESEIVAGFFVEYSSMSFGLFFLGEYANMILMSAMTSILFLGGWLAPFNMAP"
BASE COUNT          627 a          999 c          985 g          695 t
ORIGIN      
        1 tgcaaggcct gatccggcat ttccggccgc tgatggaaca gcgcatcgcc gactacaagg
       61 cgcgcctggc cccgcggctg gcagcggagt aagcgatgga actcaccgca ctgaacgaac
      121 cgctcatggt gaccgacagc aacgtcgggc agtcgtcgtt cagcggtgtg gcaatgcacg
      181 gagtgcggtt tgaagatgcc aggatgaccg cggcgcggtt cgatcacgtc gacctggcgg
      241 gtgccgttgt ttcccgcgcc aggctggccg ccgcgcggtt cagcaatgtc gacctgtccg
      301 gtgtgcacgt cgaaaacgcc atgctggttg gtgcaacgat ccgcgatgcc aacctttccg
      361 gcgtggcaat cagcgactgc gatacctccg atatgcggat caacggttat ctggtgagcg
      421 atttgatcgc cgcctaccga aagaaccagt gatgccgaaa ctcaccatcg acggaattga
      481 agtcgaagtc cctcccggct ccaccgtact acaggcggcc gaggccgctg ggcttgaaat
      541 tccccgcttt tgctaccacg accggctgtc gattgccggc aattgccgta tgtgtctggt
      601 ggaaatcgaa aagacgccgc cgaaaccaat ttcttcgtgc acctatcctg ttgccgaggg
      661 gatggtcgtg cacaccgaca ccccaatggt gcgtaacggc cgccgcggcg tgatggagtt
      721 tctgctgatc aaccatccgc ttgattgtcc gatttgcgat cagggcggcg agtgcgattt
      781 gcaggaccag gccatgggtt acggcatgga ccactcgcgt tttgcggaga acaagcgcgc
      841 cgtcaaggac aaggaactgg ggccgttggt ggcgacctcg atgaaccggt gcatccattg
      901 cacgcgttgc atccggttca tttccgaggt cgccggtgtg cccgatctcg gcgccactgc
      961 acgtggcgag cacatggaag tcggcactta tgtcgaaaaa gcgctgagtt ccgaactttc
     1021 cgccaatatt attgacttat gcccagtggg ggcgctgacg tcaaaaccgt atgcgtttac
     1081 ggcgcggtcg tgggaactgt caaaaaccga cagtatcgac gtgctcgatg ccgttggtgc
     1141 gaacatccgt gtcgataccc gcggaccgga agttctccgt atcctgccga gactgaacga
     1201 agatgtgaac gaagaatggt tgggtgacaa gtctcgcttt tcggttgacg gtttgaaacg
     1261 gcggcgtctc gacaagccgt gggtacgccg cgacggcaag ctgcagcctg catcctggca
     1321 acatgcgttc gacgccattg cagcaaaact gcatggcctg accggcgaaa agatcggtgc
     1381 catcgccggg gatctgtgcg acgccgaaag catgctggcg ttaaaggatc tgatggctgc
     1441 acttggctcg gccaatctcg actgtcggca ggatggcgcg caactgacca atgcgcgccg
     1501 cgattattac acattcaata cgcagattgc cgggatcgag gatgccgatg cgatcctcat
     1561 cgtcgggtcc aatccgcggc gcgaggcgcc agtacttaat gcccgcatcc gtaaggcatg
     1621 gcatcagaac ggtgcgagaa tcggtctgat cggagctgaa acggatctga cctatccgtt
     1681 gacccatctc ggcaccggtc ccgccgcctt cgccgacggc gaaacgttcc tgacaaacgc
     1741 aaagcacccg atggtcatcg tcgggcaggg ggccttgcgc cggcccgatg gtgccgcggt
     1801 tcttgccgcc gcatgggcaa ttgctgcgcg tgccggcgcg ctgaccgccg agtggcatgg
     1861 cttcaacgta ctgcacactg ccgctgcgcg cgtcggtgca ctcgatcttg gtttcttgcc
     1921 gggacctcag ggcaaaagcc ttgatgccat gctgaatctc gacgtgttat ggctgcttgg
     1981 cgctgacgag ttcgatacca aacggatcgg gccggaaaca tttgtcatct atcagggcca
     2041 tcacggcgat gccggagcag cccgcgccga tgtgatcctg ccaggcgccg cctacaccga
     2101 aaaacccggc acttatgtca acaccgaagg ccgcgtccaa cgcggtttca tggcgacgca
     2161 tccacccggc gaggcccgcg aagactggaa gatccttcgc gccttcagtg cccggatcgg
     2221 ccacaccttg ccttatgata cgatcgaggc gctgcgcacc cggctggagc agatcaatcc
     2281 ggtcttcgcg aacatcggct ttctgccgcg ctttggctgc accgacacga ccgggccgtc
     2341 aggcggcacg gtcactgacg caccgttcca gccggtcata aggcattacc atcagaccga
     2401 tccgatcagc cgggcctccc caacgatggc cgcctgtgtc gctgcgctgg aaccgacccc
     2461 ggcgatggcg gcggaataaa atcgatgatc ccctggctta ctgacttcct gctgcacaac
     2521 ccggttggca tcgtcatttt aacggtcctc gaggcactcg cgttgctggt gccggtgctg
     2581 attgccgtgg cctatctgac ctatgccgag cgcaaggtgc tggctgcgat tcagttgcgc
     2641 aaaggaccca atgtggtcgg cccgttcggc ctgctgcaac cgtttgccga cgccatcaag
     2701 atgatcacga aggaaaccat cattccctcc ggcgccaatc gtgtgctgtt catcatggcg
     2761 ccgatgctga cttttgtgct cgccatgctc gcatgggcgg tcattccggt gaatgatggg
     2821 tgggccatcg ccgatatcaa cgttggcgtt ttgtatctgt tcgccatttc ttcactcggc
     2881 gtctacggca ttatcgttgc cggctgggct tccaattcga aatacgcctt cctcggagcg
     2941 ttgcgctcgg cggcgcaaat ggtcagctac gaagtctcca tgggattcgt tctggtgacc
     3001 gtgctgctgt gcgccggcag cctgaacctc acaactatcg tgttggcgca acagaaaatc
     3061 tggtactgca ttccgctgtt cccgatgttc atcatcttct tcatctcggc tttggcggag
     3121 tgcaaccgcg ccccgttcga tctggccgag ggtgaatccg aaatcgtcgc cggcttcttc
     3181 gtcgaatata gctccatgag cttcggcctg ttcttccttg gcgaatatgc caacatgatc
     3241 ctgatgagcg cgatgacgtc gatcctgttt ctcggcggct ggctggcgcc gttcaacatg
     3301 gcaccg
//
LOCUS       DATAVD010001181         5207 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2719883, whole genome shotgun sequence.
ACCESSION   DATAVD010001181 DATAVD010000000
VERSION     DATAVD010001181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5207
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2719883"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="VHX39_22475"
     CDS             <1..285
                     /locus_tag="VHX39_22475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993947.1"
                     /translation="GGSGDSTAPARNNSPAPTPAAKPMPLFVNPSFQFDSTVGLVVID
                     FHDSNGTVTNSIPSQQQLDAYRSHLATPPGEGPPPVLQSSSTVDGKTATG"
     gene            263..1192
                     /locus_tag="VHX39_22480"
     CDS             263..1192
                     /locus_tag="VHX39_22480"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX3993948.1"
                     /translation="MARLLLADRIKGRDDTFLAPLIPALEQHHDVRFTRAAPGPLLAD
                     AIHWADIVWLEWCWDHAVWATTSDCLTGKKCVVRLHSIEALQTSFPANVDWSRVDRLI
                     TVSDDITAVLLANHPAIADHLSPDVIPNGIDLDHFAPGRGDRNRIAWVGHLEPKKNPM
                     LLLQIAHTLHRADPRYEVHVAGVFTDQRTARYVQRFMGTLGLEGVVRFHGAVADMPGW
                     YADKGVLLSTSMYESFGLNIGEAMAVGAFPVVHDFPGADHLWPEECLYASIDDAVALI
                     RSARTGLYRDWVAERYGLQRQQQAVLRLLAELT"
     gene            1189..1650
                     /locus_tag="VHX39_22485"
     CDS             1189..1650
                     /locus_tag="VHX39_22485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014106129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEX3993949.1"
                     /translation="MMRVIAVGRSRGGPETELFDRYCTRIRPALTLTEIADGKGAPAE
                     IKRREGEALLAALPAQTFTVALDLEGEMLDSAMFAARLEGWLSLSRPIRFLIGGAEGL
                     DRPVLARADFTLSLGRMTWPHLLVRGMLAEQIYRARSIVAGHPYHRAGRPA"
     gene            complement(1661..2011)
                     /locus_tag="VHX39_22490"
     CDS             complement(1661..2011)
                     /locus_tag="VHX39_22490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993950.1"
                     /translation="MRIHNIYVDDAGETHWRDIEVNWVEERNGSKLSARLPATGIIFR
                     ETAGDYDLSWHPAPRRQYIINLDGGVQITASDGEARQIGAGEVILVEDVRGKGHLSKS
                     IGGQMRHSIFVPVE"
     gene            complement(2027..2383)
                     /locus_tag="VHX39_22495"
     CDS             complement(2027..2383)
                     /locus_tag="VHX39_22495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993951.1"
                     /translation="MGIRVHNLYCDANGESHWRDVNIEWVNEGPEGKTSERQAAYGII
                     FRQTQAEHDRPWHAAPRRQYIINLDAGVELTASDGEARKIGAGEIVLVEDTSGKGHLS
                     KSINNQMRHSIFVPIE"
     gene            complement(2396..3172)
                     /locus_tag="VHX39_22500"
     CDS             complement(2396..3172)
                     /locus_tag="VHX39_22500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003060879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX3993952.1"
                     /translation="MAHQFCTVQDEGRLRIVTLNRPEVLNALHADANDELSAVWDEFA
                     ARDDLWVGIVTGAGGRAFSAGNDLKVQAAGKRRPNGPTGFAGLSHRFDLDKPLIAAVN
                     GVAMGGGFETALACDIIIAAENAVFALPEPRVGLIAGGGGVHRLPRSIPMKKAMGMIL
                     TGRRVPAREGFELGFVTEVVPEGQALAAAKRWAGMILECSPKAVRASKQASYRGLDEQ
                     KLETAMRTVYPAQQENVESQDYIEGPKAFAEKRKPNWQNK"
     gene            complement(3172..4392)
                     /locus_tag="VHX39_22505"
     CDS             complement(3172..4392)
                     /locus_tag="VHX39_22505"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3993953.1"
                     /translation="MSGENCLTGMKVLDLTQFEAGPSCTEALAWMGADVVKVENPKSG
                     DPGRTAGGKPGQDANYFLQYNANKRSVAVNLKDPRGVELVKQMAKQADVMVENFAPGA
                     VERLGLGYDVIKAINPSIIYCQVKGFGAGSPYEKSLAFDMIAQAVGGLMSITGEEGGP
                     PCKPGATIGDTGTGMVMAVSVLGAYVRKLRTGQGEHLQLAMQDSILHYVRNAFTFMER
                     SGGKAAPRAGSKTVGGGNPPIGVYPCKGGGPNDYVYIYTSRANPEHWTRLLKVMGRED
                     LIGDKRYDSPDARTERREEVDAIVSEWTMRHDKREAMNLVSLATIPSGAVLDTAELAA
                     DKNFEDRGIRQTMKHPVVGNYVMSGWPVRFGGKTPAVAAAPLLGQHGEEVLAQWLKLD
                     KDEIGALRNDAVVA"
     gene            complement(4467..>5207)
                     /locus_tag="VHX39_22510"
     CDS             complement(4467..>5207)
                     /locus_tag="VHX39_22510"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3993954.1"
                     /translation="LALLLQGLVSWAHGNATAPLSLLASVVLLTAFTRHALRHPVSAL
                     IDLRLFRARIFRAAAATQFLSNALNFGGQLLLPLWFLQVRQATPSATGLMLFPLGLGV
                     FCGLPTMGRLSERFGARAISGSGALLSCLGTLPFVFATVDTPYSLLGIALFVRGFGGG
                     SITIPSAAAAYASVPRESLGHATTSINICQRFGGPTGSAGLAIFLQFALSRATTQEQA
                     YHWTFCVLATIAAAGLLTASRLPGRVAH"
BASE COUNT          951 a         1667 c         1566 g         1023 t
ORIGIN      
        1 ggcgggtccg gtgacagcac cgcaccggcc cggaataact caccggcccc gacaccggct
       61 gcgaagccga tgccgctgtt tgttaaccct agtttccagt tcgactcgac tgtcggtctc
      121 gtcgtgatcg acttccacga cagcaacggt acggtgacca actcgatccc tagccaacag
      181 cagctcgacg cctaccgaag tcatctggca accccgcccg gggaggggcc gccaccagtc
      241 ctgcagtcgt catcgacggt cgatggcaag actgctactg gctgaccgga tcaaggggcg
      301 ggacgacacg ttcctcgccc cgctgattcc tgcgcttgaa cagcaccacg acgtgcggtt
      361 cacccgcgcc gctcccggtc cgctcctcgc cgacgccatc cactgggctg atatcgtttg
      421 gctcgaatgg tgctgggatc acgccgtctg ggctacgacc tcggactgcc tgaccgggaa
      481 gaagtgtgtc gtgcgcctgc actcgatcga ggcgttgcaa accagcttcc ccgccaacgt
      541 cgactggtcc cgggttgatc ggctgatcac cgtaagcgac gacattaccg ccgttctgct
      601 ggcaaaccat ccggcgatcg ccgatcacct cagcccagac gtcatcccaa acggcatcga
      661 cctcgaccat tttgcccctg gccgcggcga tcggaaccgg atcgcctggg ttggccatct
      721 ggagccgaag aaaaatccga tgctgctgct gcagatcgcc catacgctgc atcgagccga
      781 ccctcgctat gaagttcatg ttgccggcgt cttcacagac cagcgtaccg cccggtacgt
      841 gcaacggttt atgggcaccc tggggctcga aggggtggtg cggttccacg gcgcggttgc
      901 cgatatgcca ggttggtacg cagacaaagg cgtgctgctc tcgacctcga tgtatgaaag
      961 ctttggattg aacattggcg aagccatggc ggtcggcgcg tttcccgtcg tgcacgactt
     1021 tcccggcgcg gaccatttgt ggcccgagga atgcctctac gccagcatcg acgacgccgt
     1081 cgccctcatc cgatccgccc gaaccgggct gtatcgcgat tgggtcgccg agcgctatgg
     1141 attgcaacgg caacaacagg cggtgctgcg attactggcc gagctgacat gatgcgcgtg
     1201 atcgcggttg gccgttcccg tggtgggccg gagaccgagc tgttcgaccg ttactgcacc
     1261 cgcatccgtc cggctctgac attgacggaa attgccgacg gcaaaggtgc gcccgccgaa
     1321 atcaaacgcc gggaaggcga ggctctgctc gccgcgctgc cagcccagac atttacagtt
     1381 gcgctggatc tcgaggggga aatgctggac agcgccatgt tcgccgcccg gttggagggg
     1441 tggctttcgc tgtcccgccc gatccgcttt ctgatcggcg gcgccgaggg gctggaccgg
     1501 ccggttctcg cccgcgccga cttcaccttg tcgttgggcc gtatgacctg gccgcatttg
     1561 ctggtgcgcg gaatgctggc ggagcaaatc tatcgagcgc ggtcaatcgt cgccggccat
     1621 ccatatcatc gcgcgggacg gccggcttaa acgttgtgcg ctattcaacc ggcacgaaga
     1681 tggaatgccg catctggccg ccgatggact tcgacagatg gcccttgccg cggacatcct
     1741 cgaccaggat cacctcaccg gcgccgattt gccgagcctc gccgtcgctt gcggtgatct
     1801 gcacgccgcc gtccagattg atgatgtatt ggcggcgcgg cgcggggtgc caggacagat
     1861 cgtaatcgcc cgcggtttcg cggaaaatga tgccggtggc cggcagccgc gctgagagtt
     1921 tgctgccatt gcgttcctcg acccagttga cctcgatatc gcgccaatgg gtttcgccgg
     1981 catcgtcgac atagatatta tgaatgcgca tcgttacgtt ccttccttac tcgatcggca
     2041 cgaaaatcga atgccgcatc tgattgttga tggatttgga gaggtggcct ttgccggagg
     2101 tgtcctcgac caggacgatc tctccggcac caatttttcg ggcttctcca tcgctggcgg
     2161 tcagttccac acccgcatcg agattgatga tgtattgccg ccgcggcgcc gcatgccagg
     2221 gccggtcgtg ttcagcctgg gtttggcgga agatgatgcc gtaggccgcc tggcgttcgg
     2281 aagtcttgcc ttccgggcct tcgttcaccc attcgatgtt gacgtcgcgc caatgcgact
     2341 cgccgttggc gtcgcagtac aggttatgca cccgaatgcc catcaatcgt tctccttact
     2401 tattttgcca gttcggcttg cgcttttcgg cgaacgcctt gggaccttcg atatagtcct
     2461 ggctttcgac gttctcctgc tgcgccggat aaacggtgcg cattgcggtt tccagcttct
     2521 gctcatcgag cccgcggtac gacgcctgct tggatgcccg cacggccttg ggcgagcact
     2581 ccaggatcat gccggcccat cgctttgcgg ctgccaaagc ctgaccttcc ggtacgacct
     2641 cggtgacgaa accgagctcg aacccctccc gcgccggcac gcggcggccg gtcaggatca
     2701 tccccatcgc tttcttcatc gggatggagc gcggcaaccg atgcactccg ccaccgccgg
     2761 caatgaggcc aacccgcggt tcgggcaatg caaacaccgc attctcggca gcgatgatga
     2821 tgtcgcaggc aagcgctgtt tcgaacccgc cgcccattgc cacgccattc accgccgcaa
     2881 tcaatggttt gtcgagatcg aaacgatgcg ataatccggc aaagccggtc ggtccattcg
     2941 gccggcgctt cccggcagcc tgaaccttga ggtcgttgcc ggcggagaac gctcgtccgc
     3001 cggcaccggt gacgatgccg acccatagat cgtctcgcgc ggcaaattca tcccacaccg
     3061 cagacagttc gtcgttggcg tcggcatgca gcgcgttgag tacctcgggc cggttgagcg
     3121 taacgatacg caaccggcct tcatcctgga ctgtgcagaa ctgatgagcc atcaggcgac
     3181 caccgcatcg ttccgcaacg cgccaatctc atccttgtcc agcttcaacc actgggccag
     3241 cacttcttca ccgtgctgtc cgagcaaagg cgccgccgct actgcaggtg tcttaccgcc
     3301 gaaacgaacc ggccacccgc tcatgacata attcccgaca accgggtgtt tcatggtctg
     3361 gcggatgccg cgatcttcga aattcttgtc ggctgccagt tccgccgtat cgagcacagc
     3421 acccgacggg atggttgcaa gactgaccag attcatcgcc tcccgcttgt catgcctcat
     3481 ggtccattcg gagacgatcg cgtcgacttc ctcacgccgt tcggtccgcg catcgggact
     3541 gtcgtagcgc ttatcgccga tcagatcctc tcgccccatc actttcagca aacgggtcca
     3601 atgttccggg ttggcgcggc tggtgtagat gtagacataa tcgttcggac cgccgccttt
     3661 gcacggatac acaccaatcg gcggattgcc gccgccgacc gtcttcgacc cggcgcgagg
     3721 cgctgccttg ccgccgctgc gttccatgaa ggtgaaggcg ttgcgcacat aatgcaggat
     3781 tgagtcctgc atcgcgagtt gcagatgctc gccctgcccg gtacgcagct tgcgcacata
     3841 ggcgccgagc acggagaccg ccattaccat gccggtgccg gtatcgccga tcgtcgcacc
     3901 cggtttgcag ggcgggccgc cctcttcgcc ggtgatgctc atcaatccgc cgaccgcctg
     3961 cgcgatcatg tcgaaagcga gacttttttc gtaggggctg cccgcaccga agcccttcac
     4021 ctggcaataa ataatcgagg gatttatcgc cttgatgacg tcgtaaccca ggccaagacg
     4081 ttcaacggcg cccggcgcaa aattctcgac catgacgtcg gcttgtttgg ccatctgctt
     4141 cacgagctcg acgccgcgcg gatctttcaa attgaccgca accgatcgct tgttggcgtt
     4201 gtattgcaga aagtaattgg catcctggcc gggcttgccg ccggccgtgc gcccagggtc
     4261 gccggatttc gggttttcga ctttcaccac atccgcgccc atccaggcga gggcttcggt
     4321 gcacgatggg ccggcctcga actgcgtgag gtcaaggact ttcataccgg tcagacaatt
     4381 ttctccactc atggactggc gctcctcagg gctgcttggc aggagcatat cccggaaaac
     4441 cggagtccgt cgactcaggg ccctgcctaa tgtgcgaccc ggccaggcag ccttgaggcg
     4501 gtcagcaggc cggctgccgc gatcgttgcc aatacgcaga aagtccagtg gtaggcctgt
     4561 tcctgagtgg tggcccgcga cagcgcaaat tgcagaaata tcgccagacc cgcggagccg
     4621 gtcggtccgc caaatcgttg gcaaatattg atcgatgtgg tcgcatggcc caacgattcg
     4681 cgcgggactg aggcgtaggc tgcagcggcg gagggaatgg taatcgaacc gcctccgaaa
     4741 cctcggacga acagggcgat gccgagtagg ctgtagggcg tgtcaacggt tgcgaacacg
     4801 aacggcaacg tgccgaggca cgataacaag gcgccggaac cggaaatcgc acgggcgccg
     4861 aagcgctcgc tgagacggcc catggtggga agcccgcaaa agacgccgag acccaatggg
     4921 aaaagcatca agccggtcgc gctcggcgtg gcctgacgca cttgcagaaa ccacaatggc
     4981 aacagtaact ggccgccgaa attgagcgca ttcgacagga actgcgttgc cgctgcggcg
     5041 cggaatatgc gtgcccggaa cagtctcagg tcgattagtg cgctgaccgg gtggcgcaat
     5101 gcgtgccgcg tgaaggcagt caacaggacc acgctggcca gcaggctcag cggcgctgtc
     5161 gcgttgccgt gcgcccagga gacgaggcct tgcaaaagga gggcgag
//
LOCUS       DATAVD010001182         5155 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_673415, whole genome shotgun sequence.
ACCESSION   DATAVD010001182 DATAVD010000000
VERSION     DATAVD010001182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5155
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_673415"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..956)
                     /gene="pdxY"
                     /locus_tag="VHX39_22515"
     CDS             complement(96..956)
                     /gene="pdxY"
                     /locus_tag="VHX39_22515"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008478 - pyridoxal kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009443 - pyridoxal 5'-phosphate salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase PdxY"
                     /protein_id="HEX3993955.1"
                     /translation="MNILSIQSWVSYGHVGNASAVFPLQRLGCNVWSINTVQFSNHTG
                     YGHWTGQVYSGESVRELVDGIAARDVLQHCDAVLSGYMGDATIGAAILHAVERVRQAN
                     PAAIYCCDPVIGDTDTGVYVRPGIEAFLREQALPQADIATPNRFEVERLTGLDCATLE
                     QAKEAVTRVADGMRADGLRCVLMTSLETDTTPGDHLDMMVAEGGSFHLLRTPRLPVSV
                     NGAGDAIAALFLFHRLRSGSAVTALEAAGSSVHGLLRQTAEAGAREIQLVAAQQEFVA
                     PSRMFQAVPC"
     gene            complement(953..1555)
                     /locus_tag="VHX39_22520"
     CDS             complement(953..1555)
                     /locus_tag="VHX39_22520"
                     /inference="COORDINATES: protein motif:HMM:NF018154.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zeta toxin family protein"
                     /protein_id="HEX3993956.1"
                     /translation="MPWFWIVAGPNGAGKTTLVEKGIIQAITGRDLVTLNADVRTREL
                     LAANPQLPDANLRAAIAIDARVAACIEQGVDVLVETVLSSDKYLDDVDRARSLGYQVG
                     MIYVGLASTGDAVRRVALRHARGGHDVPTDKVVSRWSRSIAMLGRMAGKLDRLFVFDN
                     TRPEGPRLIAFGFGRQVTLLGTDRIPEIDAVLLPAGQEEP"
     gene            complement(1562..1957)
                     /locus_tag="VHX39_22525"
     CDS             complement(1562..1957)
                     /locus_tag="VHX39_22525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993957.1"
                     /translation="MAKQAARRKPRTKRDAAWPDAANHGADDATAAARPRATAGEGTL
                     SSIGTVRRPKRSAVETERDAAIAMGKALTSGFQQATEAAVREAHAEGLAVPARVDGIA
                     VEIRPDGEIVPIDDRLPWSPVTWRGAATR"
     gene            2128..3204
                     /locus_tag="VHX39_22530"
     CDS             2128..3204
                     /locus_tag="VHX39_22530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
                     /protein_id="HEX3993958.1"
                     /translation="MPTPLLFQPITFRSVTARNRIVVSPMCQYSATDGLGDDWHIQNL
                     GAKAAGGAGIVMAEATHVSAIGRITPGCLGAYDPQHGTLLTRLAAVIVKCGSVPAIQI
                     AHAGRKASSQVPWEGGKPIPPQAGGWVPVAPSAIPMVDGAVDPHPLSTVEIAEIAGQF
                     AASARMAREAGFKVLELHSAHGYLSHSFLSPISNHRNDAYGGDLAGRSRFLMQTLDAI
                     RTEWPDDLPLWVRLSCSDYMPGGLTIDDVVEVAKQLKARGDVDLIDCSSGGVSNAQTI
                     PSLHPGYQVPFADAIRHRAGIATGAVGMITEPTHAAEILANERADVVLLARALLADPG
                     WPVRAAKALGVKPALPSQYLRAAL"
     gene            3205..3762
                     /locus_tag="VHX39_22535"
     CDS             3205..3762
                     /locus_tag="VHX39_22535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993959.1"
                     /translation="MGGFMHIPSPLTLRTTALLLIALALASCGPKKDEFAPACPVPGL
                     VRPLSELSRYRGSSTDLRGLVVRARVVDVTGNCEPGETPDTVVTHVQVLIEATRGPAM
                     QGDSIQLPVFVAVTDSGTIYDKKLFWLPVTFTQNIDTARATSEEVRMEIPITQQKSAA
                     VYGIIGGFQLSPEELAIWRRNNPRQ"
     gene            3910..4884
                     /locus_tag="VHX39_22540"
     CDS             3910..4884
                     /locus_tag="VHX39_22540"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HEX3993960.1"
                     /translation="MKNQDWEIPRNLRPDPDDYSFDLERALKAVVSLKTYVPPDAFTA
                     TTLGTERAGSGVVINDKGLVATVGYLISEAETIWITSNDGQVVPGHALAFDQETGFGL
                     VQALGSLNLPHLELGDSDMLKVGDQVVFAAGGGRHHAIETRIVGRQEFAGYWEYVLDD
                     ALFTGPAHPFWGGCGLIGTDGKLMGIGSLILQQGDGKGRRLDMNMVVPIGLLGPILKD
                     LLTFGRVNRPARPWLGMYATESGDSIIIGGLSETGPAAQAGLRAGDKILTVNDDEVPD
                     LAGLWRRVWASGSAGAEVRLRIERDDTPRRISVRSADRVSFLKSPKLH"
     gene            4884..>5155
                     /locus_tag="VHX39_22545"
     CDS             4884..>5155
                     /locus_tag="VHX39_22545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3993961.1"
                     /translation="MSDADGARLRGGIVPVTPFEQNCVIMWDEDTRRALVFDPGGDVE
                     RILAVIDQSGVTVERILLTHGHLDHAGGAAGLAEALRARPGAGPVP"
BASE COUNT          895 a         1689 c         1613 g          958 t
ORIGIN      
        1 gcgaggtggc tggcaacggt gaatctctga agcgccagct tgaggaattc ctgagtgagg
       61 tgagggtggc ataggaacca aaggtcagct gccccttagc acggcacggc ctggaacatc
      121 cggctcggcg ccacgaactc ctgctgcgcc gccacgagtt gaatttccct tgcacccgcc
      181 tcagccgttt gccgcagcag cccgtgcacc gaggaacccg ccgcctccag cgcggtcacc
      241 gcgctgccgg agcgcaaccg atgaaacagg aacagcgccg cgatcgcatc acctgcgcca
      301 ttcaccgaca ccggcaatct tggcgtgcgc agcaagtgaa acgacccgcc ctcggcaacc
      361 atcatgtcga ggtgatcgcc cggcgttgta tcggtctcaa ggctggtcat cagcacgcag
      421 cgcagcccat ccgcacgcat cccatcagcg acacgcgtca ccgcttcctt ggcctgttcc
      481 agtgtggcgc agtccagacc ggtcaaccgt tccacttcaa accggttcgg ggtcgcaatg
      541 tctgcctgag gcaatgcctg ctcgcgcaaa aacgcctcga tcccgggccg gacatagacg
      601 ccggtgtcgg tatcgccaat caccggatcg cagcaataaa tcgccgccgg attggcctgc
      661 cgcacccgct ccaccgcgtg caggatcgcc gccccgatcg ttgcgtcgcc catataaccc
      721 gacaggaccg catcgcaatg ttgcagcaca tcgcgtgccg caattccatc gaccagttcc
      781 cgtaccgact cgcccgagta aacctgcccg gtccaatgcc cgtaaccggt atggttggag
      841 aattgcacgg tattgatcga ccagacgttg cagcccagtc gttgcaacgg aaacactgcg
      901 ctggcgttgc cgacgtggcc gtaggaaacc caggactgaa tcgaaagaat gttcatggtt
      961 cctcctggcc ggccggcagc agcaccgcat cgatctccgg aatgcgatcg gtgccgagca
     1021 atgtcacctg ccggccgaat ccaaacgcga tcaggcgcgg gccctccggc cgtgtgttgt
     1081 cgaagacgaa cagacggtcg agtttgccag ccatcctgcc aagcatcgca atcgaccggg
     1141 accagcgcga cacgacctta tctgtcggca cgtcgtgtcc gccacgtgcg tgccgcagcg
     1201 ccacgcggcg taccgcatcg cctgttgacg cgagcccgac gtaaatcatt ccgacctggt
     1261 atccaaggga acgtgcgcga tcaacatcgt cgaggtattt gtccgacgac agcaccgtct
     1321 ccaccaaaac atcgacgcct tgctcgatgc acgcggcaac ccgtgcgtcg attgcaatgg
     1381 cagcgcgcag gtttgcgtcc ggcaattgcg gattggccgc cagcaactct cgcgtacgga
     1441 catccgcgtt cagcgtcacg aggtcgcgcc cggtgatcgc ctgaatgatg cccttttcga
     1501 ccagtgtcgt cttgccggct ccattaggtc cggccacgat ccagaaccag ggcaacgccg
     1561 atcagcgcgt cgctgctccc cgccaggtca ccggcgacca gggcaatctg tcgtcgatcg
     1621 gaacaatctc gccgtccggc ctgatctcga cggcaatccc gtcgacccga gccggaactg
     1681 ccaggccttc ggcatgggct tctctgaccg cagcctcagt cgcttgctgg aagccggacg
     1741 tgagcgcctt gcccatggcg atcgcggcat cccgttcggt ctcgaccgcg cttcgtttgg
     1801 gccgcctgac cgtgccgatg ctgctcaaag tgccttcgcc ggcagttgcc ctcggtcgtg
     1861 cggccgctgt tgcatcgtcg gcgccgtggt tcgcagcgtc cggccacgcc gcatcgcgtt
     1921 ttgtgcgtgg tttccgcctg gccgcctgct tcgccattac accagtctcc aactctgcat
     1981 tcataatata gcctgaatcg ggacggttgc atcatgccgg aatcggcttc ccacccgaat
     2041 tccgctggtc cgatgttgtg atccggcgcg ccaggcccta tggccgcgca acgacaccgt
     2101 cgatgtcacc ccgaggatcg ccgccccatg ccgacgccgt tgctgttcca gccgatcacc
     2161 ttccgctccg tcaccgcacg caaccgcatc gtggtgtcgc cgatgtgcca gtacagcgcg
     2221 accgacggtc tcggcgacga ttggcacatc cagaacctgg gcgccaaggc cgcaggcggc
     2281 gccggcatcg tcatggccga ggcgacccat gtctccgcca tcggccgcat cacgccaggc
     2341 tgcctcggcg cctatgatcc gcaacatggg acattgctga cccgccttgc tgcggtgatc
     2401 gtcaaatgcg gttcggtgcc tgccatccag attgctcatg ccggccgcaa ggcctccagc
     2461 caggtgccct gggagggagg caagccgatc ccgccacaag ccggcggctg ggtcccggtt
     2521 gcaccgagtg ccattcccat ggtcgatgga gcggtcgatc cgcaccctct gtcgaccgta
     2581 gagattgccg aaatcgccgg ccagttcgcc gcctctgccc gcatggcacg tgaggccggg
     2641 ttcaaggtgc tggaactgca ctcggcgcat ggttacctgt cgcattcgtt tctgtcgccg
     2701 atctccaacc accgcaacga tgcctacggc ggcgatctgg ccgggcggtc gcggttcctg
     2761 atgcaaacac tggatgcgat ccgcaccgag tggccggacg atttgccgct ttgggtccgg
     2821 ctgtcatgct cggactatat gccgggcggt ctgaccatcg acgacgtggt ggaggtcgcc
     2881 aaacaactga aggcgcgcgg cgacgtggat ctgatcgatt gttcttccgg cggcgtgtcg
     2941 aatgcacaaa caatcccgtc gctgcatccg ggctatcagg tgccattcgc cgatgcgatc
     3001 cgccatcgcg ccgggatcgc caccggtgcg gtcggaatga tcaccgagcc aacccatgcg
     3061 gcagaaattc tcgccaacga gcgagccgat gtcgtactgc tcgctcgtgc cctgctcgca
     3121 gatccaggct ggcccgtccg ggctgcgaaa gctttgggcg tgaagcccgc gttgccgtcg
     3181 caatacctgc gggcggcatt gtaaatgggc gggttcatgc acattccttc gccgctcacc
     3241 ctgcgcacga ccgcgctgct gctgatcgcg ttggcgctcg cgtcctgcgg gcccaaaaag
     3301 gacgagttcg cgcccgcctg tccggtgccg ggcctcgtga ggcccctgtc ggagctatcg
     3361 cgctaccgcg ggtcgtcgac ggaccttcgt ggactcgttg ttcgtgcccg ggttgtcgac
     3421 gttaccggca actgtgaacc gggcgagacc cccgatacgg tcgtgaccca cgttcaggtc
     3481 ctgatcgagg cgacccgtgg tcccgcaatg cagggtgatt cgatccagtt gccggtgttc
     3541 gttgccgtga ccgattcggg tacgatctac gacaagaagc tgttttggct gccggtcacg
     3601 tttactcaaa acatcgacac cgcgcgcgcg acgagcgagg aggtgcgcat ggagatcccc
     3661 atcacgcagc agaaatccgc tgcggtctac gggatcatcg gcggctttca actcagcccc
     3721 gaggagcttg ccatttggcg ccgcaacaac cctcggcagt agccgatacg agacgcgaag
     3781 cggggcgatt cccggacggg ttgcgactgt gcaggtcgcg cattcctctg ctatggtagt
     3841 cccatgagtg atgatcctcc gaacaatgat ccccccaggg accgcccagg tcagggaagg
     3901 cgtcgcggca tgaagaacca ggactgggag attccgcgca atctgcggcc agatccggac
     3961 gattattcgt tcgatctcga gcgcgcgttg aaggctgtgg tcagcctgaa gacctacgtc
     4021 cctcccgacg ccttcaccgc caccactctg ggtaccgagc gtgccgggag cggcgtcgtg
     4081 attaacgaca aggggttggt ggcgaccgtc ggctatctca tctccgaagc cgaaacgatc
     4141 tggatcacct cgaatgacgg ccaggtggta cccggccacg ctctggcgtt cgatcaggag
     4201 accggatttg gcctggtgca ggctctcggc agcttgaatc tgccgcacct cgagcttggc
     4261 gattcggaca tgctgaaggt aggcgatcag gtggtctttg cggctggcgg cggccggcac
     4321 catgcgatcg agacccggat cgttggccgg caggaattcg ccggatactg ggaatacgtg
     4381 ctggatgacg ctctgttcac cggtcccgcg catccgtttt ggggcggctg cgggctgatc
     4441 gggacggacg gcaaactgat ggggatcggc tcgctgatct tgcagcaggg cgacgggaag
     4501 ggccggcgac tcgatatgaa catggtggtg ccgatcgggt tgcttggacc gatcctgaag
     4561 gatttgttga cgttcgggcg cgtcaatcgt ccggcgcggc cgtggctggg gatgtacgcg
     4621 acggaatccg gcgactcgat cattatcggc gggctgtctg aaaccgggcc ggcggcgcaa
     4681 gcggggctgc gagcggggga caagatcctc actgtgaacg atgacgaggt gccggatctc
     4741 gcgggcctct ggcgccgtgt gtgggcatcc ggcagcgccg gtgccgaggt gcggttacgc
     4801 atcgaacgcg acgacacccc ccgccggatc agtgtgcgtt cggctgatcg ggtgagtttc
     4861 ctgaagtcgc cgaagttgca ctgatgtccg acgctgacgg tgccagactt cgcggcggca
     4921 tcgttccggt gacgccattc gagcagaact gcgtcatcat gtgggacgag gacaccaggc
     4981 gcgccctggt gttcgatccg ggcggcgatg tcgagcgcat tctggctgtg atcgatcaga
     5041 gcggcgtcac tgtcgagcgc attctgttga cccatggaca tctggaccac gcgggcggag
     5101 cggccggtct cgccgaggca ttgcgtgccc gcccaggcgc cggtccggtg ccgat
//
LOCUS       DATAVD010001183         1535 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2345459, whole genome shotgun sequence.
ACCESSION   DATAVD010001183 DATAVD010000000
VERSION     DATAVD010001183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2345459"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..536
                     /locus_tag="VHX39_22550"
     CDS             <1..536
                     /locus_tag="VHX39_22550"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEX3993962.1"
                     /translation="RLQGERDRLLRLATRDRLTGLWNRRAIFERLSEALSDVHALNPE
                     ISVVLADVDGLKKINDRFGHRVGDAVLREIARRFCFCVRRSDELGRFGGEEFLIVLLG
                     CGTQAAAIRVAEFRAAIENEYIMVEGKQLSVSCSFGVHTVIRAGTDCDGAARDVETAL
                     RRAKQTGPSSPANIKAG"
     gene            568..786
                     /locus_tag="VHX39_22555"
     CDS             568..786
                     /locus_tag="VHX39_22555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993963.1"
                     /translation="MMIEQGEQHRTPDGAGGSGTDHVAEGRQLHRMHFEVLLTGDSYP
                     LSRIVTYLVESAMRMYPAGCESTITSRV"
     gene            complement(1110..>1535)
                     /locus_tag="VHX39_22560"
     CDS             complement(1110..>1535)
                     /locus_tag="VHX39_22560"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEX3993964.1"
                     /translation="AHPRLRQYIHQHTKDWSARVDAADAFVFVMPEYNYGFNAPLKNA
                     IDFLHHEWKHKPVGFVSYGGVAAGTRAVQMVKQVVTTLSMVPLFEAVSIPFVAQFLGD
                     DGSVQANEIMETAATAMLDELQRWVSALSVLRASASKPS"
BASE COUNT          301 a          443 c          501 g          290 t
ORIGIN      
        1 atagattgca aggagaaagg gacagactgt tgcggctggc cacgcgggac cgcctgaccg
       61 ggctatggaa tcgacgggcc atttttgaac ggctgtccga ggcgctgagc gacgtgcatg
      121 cgctcaatcc cgagatcagc gtcgtcttgg cggacgttga cggactgaag aagatcaatg
      181 atcgcttcgg ccaccgagtc ggcgacgccg tgttgcggga aattgcgcgg cgattctgtt
      241 tctgcgtgcg ccgctcggat gagttgggcc gatttggcgg cgaggagttt ttgattgtcc
      301 ttctcggctg cggcacgcag gcagccgcga tccgagtcgc ggaattccgt gccgcaattg
      361 agaacgaata catcatggtt gaaggcaaac aactcagtgt atcgtgcagc ttcggcgtgc
      421 acacggtgat ccgcgccggc accgattgcg atggagcagc gcgcgacgtt gaaaccgcgc
      481 tccgccgcgc caagcagacc gggccgtcct cgcctgcgaa catcaaggca ggctaacggc
      541 gctcaaggaa ctcggatacg ggaacgtatg atgatcgaac aaggtgagca gcaccgcacg
      601 ccggacgggg ccggcggatc cggtaccgac cacgttgcgg agggccggca gttgcaccgc
      661 atgcactttg aggttctatt gacgggcgat agttacccgc tgagccggat cgtgacctat
      721 ctggtcgaaa gcgccatgcg gatgtatccg gccggttgcg agagtacgat caccagtcgg
      781 gtataacgtg actcccggcg tgcccatgac ggcatcagcg gaggccgggt gcaagattac
      841 tgtcgccggt cgagtgcagc ggcgatcgcc acggccagct gtccatttgg cgcagaatcg
      901 gggtgaggct cgcttcaccg gactcttcat cgccgattcc gccacgccgc cgctcccgtc
      961 ggatcctggg ccaaggcacg aaccaggcgc agatcatggc ggagatgccg gtgaatgatg
     1021 atccgttcgc gggccggcgc ttcgccgcga ggatgggccg cggacggttg accgggtatc
     1081 attgggattc ctttcgccga ggcggacgcc tacgatggtt tgctcgccga agcacggagt
     1141 acggaaaggg ccgataccca tcgctggagt tcatcgagca tggcggttgc cgccgtttcc
     1201 atgatctcat tcgcttgcac gcttccatca tcaccgagga actgcgccac gaaagggatg
     1261 gacaccgctt cgaacagcgg caccatggac agagtggtaa cgacctgctt gaccatctgt
     1321 acggcccgag tgcccgccgc gaccccgcca taactgacga acccgaccgg cttgtgcttc
     1381 cattcgtggt gcagaaagtc gatggcattc ttgagcggag cgttgaaacc gtagttatat
     1441 tcaggcataa cgaacacaaa ggcgtccgcc gcgtctactc gggcgctcca gtccttcgta
     1501 tgttggtgga tgtattgccg caaacgggga tgggc
//
LOCUS       DATAVD010001184         3552 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1231203, whole genome shotgun sequence.
ACCESSION   DATAVD010001184 DATAVD010000000
VERSION     DATAVD010001184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3552
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1231203"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2088)
                     /locus_tag="VHX39_22565"
     CDS             complement(<1..2088)
                     /locus_tag="VHX39_22565"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3993965.1"
                     /translation="MWPLDRPAREVLKLPGETIIPWAVFDWQWYLHTYPEATATAGAD
                     EPEAVLEYYLELGQRLGHSPNRMFDEQWHRRMYPQIAERVAAGHWRSAFDAYCRRGAL
                     DRSAHWLFDELAYRDRYPDLTNEVLAQFGLFNGYDHYLRHGIEEDRISHSLFDPRIYL
                     SHFDAADVAVIREKGIFQHYLKRIESAEPELRTSIYFDPVWYLKRYPDVAEAIAAKRW
                     KCALHHYLCNNSPTEFDPLESFSESWYLRRDPGLRAVVTARGFRNGYAHFLRFGAKEK
                     RSPTAFVDLAWYATQPPVRADLEQGRAPDAFAHWLAIGASAGLSSAKPDTETVTDTQA
                     KHLFHQSAIAQLPIVGRFGCRFECSSDTVLTVVIVVRDGFAATMATIASLRSNIASDI
                     ELIIIDCGSTDETTTIGQYIPGAKVLRFDSDIGWSRAADTGRQLAGAPAILFLSNDAR
                     IAPGSVEHALARLAADDSVGAIGGMILQVSGTIAQAGGILWNSGGTHDYKHGTPPLEP
                     EANFVRTIDFCTPAFLVVRTALLSQLDGFDHECSAGYETVDLCLRVAEAGFRVVYDPS
                     VMLALGSVSPPRGAPGDHFLHKHETALAKRLAPGGPAQVFARHAGTKPHRVLFIEDTV
                     PLRRIGSGFVRANDLIHIMASLGCAVTVFPVNGCDHNLARVFGDMPESVEVMHTFSLS
                     RLAAFLTARPDYYD"
     gene            complement(2101..3339)
                     /locus_tag="VHX39_22570"
     CDS             complement(2101..3339)
                     /locus_tag="VHX39_22570"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3993966.1"
                     /translation="MDGSIPPAPAGKGLAKTAGALAGIKVIDLTRVLGGPYCTMILSD
                     HGADVIKIEPPQGDEVRDWGPPFHGDDASYFIGVNRNKRAIALDLGKPEGKAVLLRLL
                     QGADVLIENFKPGSMEKWGLGYDDVLSNRFPGLIHCRVSGFGGDGPLGGLPGYDAILQ
                     AMTGLMSVNGDASTGPMRLGTAMVDMGTGLYSAIGILMALHERGHSGLGQYLDMTLYD
                     CGMALLHPQAANYFLNGKRPSGTGNPHPNLVPYDKYPTRTCEIFIASGNNGQFRRLCE
                     LVGRPELADDPRFANNGERNVNRVALTLALAAAFADQDGKELSLRLIRAGVPAGPVLP
                     VDEATAAPHTAHREMVTELDWYKGIGTPIKFSRTKGGTRRPPPKFNEHGTDILTQAGY
                     TEAEIDVLRESGVLHVKRRL"
BASE COUNT          678 a         1076 c         1154 g          644 t
ORIGIN      
        1 atcgtaatag tctggtcggg ccgtcagaaa agcggcgagc cggctcaggg agaacgtgtg
       61 catcacctcg accgattccg gcatatcgcc gaacacgcgc gccagattgt ggtcgcaccc
      121 attcaccgga aacacggtca ccgcgcagcc gagtgacgcc atgatgtgga tcaagtcatt
      181 cgcccgcacg aagccggagc cgatccgccg cagtggcacg gtatcctcga tgaacagcac
      241 gcggtgtggt ttggtgccgg catggcgggc aaacacctgg gcaggaccgc cgggcgcgag
      301 ccgtttcgct agcgcggttt catgcttgtg caggaaatgg tcaccaggcg cgccgcgtgg
      361 cggactgacg ctgccaaggg cgagcatcac ggacgggtca tagacgacac gaaatccggc
      421 ctcggcgacc cgcaggcaca ggtcgacggt ctcataaccg gccgaacatt cgtggtcgaa
      481 cccatcgagt tgggaaagga gcgctgttcg caccaccagg aaagcgggtg tgcaaaaatc
      541 aatggtgcgg acgaagttcg cttccggctc cagcggtggc gtgccgtgct tgtaatcgtg
      601 ggtgccgccg gagttccata ggatgccgcc ggcctgggcg atggtgccgg atacctgcag
      661 gatcatgccg ccaatggcgc cgacggaatc gtccgctgcc agacgcgcca gggcatgttc
      721 caccgatccg ggtgcgatcc gcgcgtcgtt ggacaggaat aggattgccg gcgcgccggc
      781 aagctggcgg ccggtatccg ccgcccgcga ccagccaata tcgctgtcga accgaaggac
      841 tttggcgccc ggaatgtatt gcccgatcgt ggtggtttcg tccgtggacc cgcaatcgat
      901 gatgatcagt tcgatgtccg aagcgatatt ggaccgcaag gaggcgatcg tggccattgt
      961 tgccgcgaag ccatcgcgca ccacgatgac gacggtaagg acagtgtcgc tcgaacattc
     1021 gaagcggcac ccaaagcgtc cgacgatcgg cagttgcgcg atggcggact gatgaaacag
     1081 gtgcttcgcc tgcgtatcgg tgacggtctc ggtgtccggc ttggctgagg aaagcccggc
     1141 agaggcgccg atcgccagcc aatgtgcaaa ggcgtcgggt gcacgaccct gctccagatc
     1201 cgctcttaca ggtggttgtg tggcgtacca ggcaagatcg acaaaagccg ttggcgagcg
     1261 cttttccttc gcgccgaagc gcaggaagtg cgcgtatcca ttacggaatc cgcgggccgt
     1321 gacgaccgcc cgcagaccgg gatcgcgccg caggtaccaa gactccgaga aactctccag
     1381 cggatcgaac tcggtcggcg aattgttgca caggtaatga tgcagggcgc atttccagcg
     1441 cttcgctgcg attgcctctg cgacgtcggg atagcgcttc agataccata ccggatcgaa
     1501 atagatcgaa gtccggagtt caggttcagc cgattcgata cgcttcagat agtgctgaaa
     1561 aatacccttc tcgcggatca cggcgacgtc ggcggcgtcg aaatgcgata gataaatgcg
     1621 cggatcgaac aacgaatggc tgatacgatc ttcctcgatg ccgtgacgaa gataatgatc
     1681 gtaaccattg aaaagtccga attgggcgag aacctcattc gtcagatccg ggtagcgatc
     1741 acgatacgcc aactcatcga acagccagtg ggcggaacga tccagggcac cccgccggca
     1801 ataggcatcg aaggcggacc gccaatgacc cgccgccacc cgttcggcga tttgcggata
     1861 catccgccga tgccactgtt cgtcgaacat gcgattgggc gagtgcccca gccgctgtcc
     1921 gagttccagg tagtattcga gaaccgcctc cggctcgtcg gcgcctgcgg tcgcggtggc
     1981 ctcaggatag gtgtgaagat accactgcca atcgaagacc gcccagggaa tgatggtttc
     2041 cccgggcaat ttcagcacct cgcgggcggg acggtcgagc ggccacatgc ctggggcctg
     2101 ctatagccgt cgctttacat gcagcacgcc ggattcgcgc aacacgtcga tctcggcctc
     2161 ggtatagccg gcctgggtca ggatgtcggt gccgtgctca ttgaatttcg gtggcgggcg
     2221 gcgtgtgcca cccttggtgc ggctgaattt gatgggcgtt ccgatgcctt tataccagtc
     2281 cagttcggtg accatctccc gatgggccgt gtgcggagcc gcggtggctt cgtccactgg
     2341 cagcaccggc ccggcgggca cgcccgctcg gatcagccgc agcgacaatt ccttgccatc
     2401 ctggtcggcg aaggcggcgg caagggccag agtcagcgcg acgcgattga cgttgcgctc
     2461 gccgttgttg gcgaagcgcg gatcgtccgc caattccggc cgcccgacca actcgcacag
     2521 cctgcggaac tggccgttat tgccgctggc gatgaagatc tcgcaggttc gggtcgggta
     2581 tttgtcatac ggtactaggt tcggatgcgg gttcccggtg cccgacgggc gcttgccgtt
     2641 caggaaatag ttcgccgcct gagggtgcag cagcgccatc ccgcagtcgt aaagggtcat
     2701 gtccagatat tggcccagtc cggaatggcc gcgttcatgc agcgccatca ggatgccgat
     2761 cgccgaatag aggccagtcc ccatgtcgac catggcggta ccgagacgca tcgggccggt
     2821 ggaggcgtcg ccgttgacgc tcatcaggcc ggtcatggcc tgcaggatgg catcgtagcc
     2881 cggaagcccg cccaacgggc cgtcaccacc gaagccggag acccggcaat ggatcaggcc
     2941 agggaagcgg ttggacaaca catcgtcata gcccaggccc catttttcca ttgagccagg
     3001 cttgaaattc tcgatcagaa cgtcggcgcc ttgcagcagg cgcagtagta ccgccttgcc
     3061 ctccggcttg cccaggtcga gcgcgatcgc tcgcttgtta cggttgacgc cgatgaaata
     3121 gctggcgtcg tcgccgtgga acggagggcc ccagtcgcgg acctcgtcac cctgcggcgg
     3181 ctctatcttg atcacgtccg cgccatggtc ggacaggatc atggtgcagt aggggccgcc
     3241 cagcacgcgg gtcaggtcga tgaccttgat cccggccagg gcgcccgcgg tttttgcgag
     3301 gcccttgccg gccggtgcgg gggggataga gccatccatc aggtcgtgta ctccgagttg
     3361 aaaaggatac gcatgccagg gcctcgccgc gctaccccag caccgccgct agaagttccg
     3421 cgctgcggcc attggcgatc gtcgccgacc gcccgtccca atgaatgccg ttcaccctgg
     3481 caaacgcatg atcggcgttg gggtagacat ggctgatggc gtgtttatgg ccttgcgtgg
     3541 cggcggcgac gg
//
LOCUS       DATAVD010001185         2392 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3089657, whole genome shotgun sequence.
ACCESSION   DATAVD010001185 DATAVD010000000
VERSION     DATAVD010001185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3089657"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..221
                     /locus_tag="VHX39_22575"
     CDS             <1..221
                     /locus_tag="VHX39_22575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993967.1"
                     /translation="TEPTPVMPRWLYWCFAAFIFCCGVSHVLDDVTVWFPVYRLQALV
                     LAITALVSLFAAMLPVSVWIAREVGKRP"
     gene            279..1331
                     /locus_tag="VHX39_22580"
     CDS             279..1331
                     /locus_tag="VHX39_22580"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010506842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEX3993968.1"
                     /translation="MFASAVLPLLRRIDPERAHGIALRALRLGLGGRSREADDPALAI
                     TVLGRRFANPIGLAAGFDKGAVAAKALMRLGFGFVETGTVTPLPQPGNPKPRLFRLQP
                     DRAVINRLGFNNAGLPAYLRQLARLADRPVPLGANVGINKEGADPVRDYPVLIAAVAP
                     YADYAVINISSPNTPGLRDLQSEAHLRTILSAVAQIANRPPILVKIAPDLSDDGLAAV
                     VETCVTHGIQGLIVGNTTITRPDGLRSAHAGEPGGLSGVPLFALSTAVLARAFLLARG
                     RLTMIGTGGVFSGEDALTKIRAGASLVQLYTGFAYHGPALLPRLKAELAAALKSAGFN
                     RVEDAVGTTAKELSDR"
     gene            1335..2201
                     /locus_tag="VHX39_22585"
     CDS             1335..2201
                     /locus_tag="VHX39_22585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01459 family HAD-type hydrolase"
                     /protein_id="HEX3993969.1"
                     /translation="MRFLTGFAPLAAEYDGFVLDLWGVIHDGVNAFPHAVDCLTHLRD
                     AGKKTLLLSNVPRPNDAVRTMMRRMGIDDALYTDILTSGEAVRRALQFPPDPWWAALG
                     NRVYHLGPERDKPVLEGLPLITVETPGDADFVLNTGPDDHRNPSDMNEFEPTLQECAK
                     HRLPMICGNPDLVVIRGGVRVLCAGSLALRYQELGGDVRSIGKPDPAIYQPVLAQLDM
                     PKDRVLAVGDSLRTDIAGAASVGLSTCWVLDGLHGEALRGADGSYDPHEVAAEALQAG
                     LTPVAAMARFAW"
BASE COUNT          374 a          780 c          768 g          470 t
ORIGIN      
        1 cgaccgagcc cacaccggtc atgccgcgct ggctgtactg gtgcttcgct gctttcattt
       61 tctgttgcgg tgtctcgcat gtgttggatg acgtgacagt ctggttcccg gtttaccgct
      121 tgcaggcctt ggtgctcgcc atcacggcac tggtatcgct gttcgcggca atgctgccgg
      181 tatcagtgtg gatcgcacgc gaggtcggca agcgaccgta accaccaccc ttccgggcgg
      241 gtggcgactc cacattcgtt ggcccataat ccgaaaatat gtttgcgtct gccgtattac
      301 cgttattgcg ccggatcgac cccgagcgcg cgcatggcat cgcgttgcgc gcgctccggc
      361 tcggtttggg cgggcgatcc cgcgaggcgg atgacccggc actggctatc accgttctcg
      421 ggcgccgctt tgccaatccg atcggcctcg ctgccggctt cgataaaggc gccgttgcag
      481 caaaagcgct gatgcggctt ggctttggct ttgtcgagac cggcaccgtg acgccactgc
      541 cgcaacccgg caatccgaag ccgcgcctgt ttcgcctgca accagaccgg gctgtcatca
      601 accgtctcgg gttcaacaat gccggtctgc cggcctatct gcggcaactc gcgcgcctgg
      661 ccgaccggcc ggtgccgctt ggcgccaatg tcggcatcaa caaggaaggc gccgatccgg
      721 tgcgcgacta cccggtcttg atcgccgccg tcgcgcccta cgccgattat gccgtcatca
      781 acatttcgtc ccccaacacg ccgggcctgc gcgacctgca aagcgaagcc cacctgcgca
      841 ctatcctgtc cgccgtagcc cagatcgcca accgtccgcc gatcctggtg aagattgccc
      901 ccgacctgtc cgacgacggt ctcgctgccg tggtcgagac ctgcgtaacc catggcatcc
      961 agggattgat tgtcggcaac acgacgatca cgcgccccga cggtctgcga tcggcacacg
     1021 cgggcgaacc gggcggactg tccggtgtgc cgctgtttgc tctgtccacc gccgtgctgg
     1081 cccgggcttt cctgctcgca cgagggcgcc tgacgatgat cggcaccggc ggtgtgtttt
     1141 cgggtgaaga cgcgctgacc aaaatccgcg ccggcgcctc gttggtgcag ctttataccg
     1201 gttttgccta tcacggaccg gcgctgctgc cgcggctgaa ggccgagctg gcggccgcgt
     1261 tgaaatccgc cggtttcaac cgagtggaag acgcggtagg caccaccgcg aaagaacttt
     1321 cggatcgatg actgatgcgc tttttgaccg gcttcgcccc gctcgctgct gagtacgacg
     1381 ggttcgtgct cgacctttgg ggcgtcatcc atgacggggt gaacgcgttt ccccacgctg
     1441 tcgattgcct gacgcatctg cgggatgccg gcaagaagac cctgctgctg tcgaacgtgc
     1501 cgcggccgaa tgacgccgtg cgaaccatga tgcgacggat gggaattgat gacgcgctct
     1561 ataccgacat cctgaccagt ggcgaggcag tgcgccgcgc tttgcaattc ccgcccgacc
     1621 cctggtgggc cgctctcggc aaccgcgtct atcacctggg cccggagcgc gataagccgg
     1681 tactggaggg tctgcctctg atcaccgtcg agacccccgg agacgccgac ttcgtgctga
     1741 acacgggtcc ggatgaccat cgcaatccga gcgatatgaa cgagttcgag cccactcttc
     1801 aggagtgcgc gaaacaccga ctgccgatga tttgcggcaa tcccgatctg gtcgtgatcc
     1861 gtggcggcgt gcgtgtgttg tgtgccgggt cgctggcgct gcgctatcag gagcttggcg
     1921 gcgatgtgcg ctcgattggt aagccggacc cggcgattta ccagccggtg cttgcgcagt
     1981 tggacatgcc gaaggaccgg gtgctggccg tcggggactc gttgcgcacg gatatcgcgg
     2041 gtgccgcctc ggtcgggctt tcgacgtgct gggtcctgga cgggctgcac ggcgaggctt
     2101 tgcgcggcgc tgacggctca tatgatccgc acgaagtcgc ggccgaggcg ctgcaggcgg
     2161 gactgacccc ggtggcggcg atggcgcggt tcgcctggta atacgaactg aagtatcgat
     2221 cgacttttgg tcacgggtcc atcatcaccc tgatgcctgg ccgcgacgtc gctggcaacc
     2281 cgccacagag ggttgcgaca ggttgcgacg ctaccctgtc actgtgccgc ggagcgtcgg
     2341 gtcccgaaag cagccattcg cgagcatcgg cccgcagcag cgctgcccgt ga
//
LOCUS       DATAVD010001186         7044 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3652290, whole genome shotgun sequence.
ACCESSION   DATAVD010001186 DATAVD010000000
VERSION     DATAVD010001186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7044
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3652290"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..731
                     /locus_tag="VHX39_22590"
     CDS             <1..731
                     /locus_tag="VHX39_22590"
                     /inference="COORDINATES: protein motif:HMM:NF016623.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HEX3993970.1"
                     /translation="RPRIGLLLAGIGMNEAESDAAIRTLPGAVSLAVSPYAAADRPNL
                     PKLLATARTTGHEYLIEIPLEPAGFPLNDPGPSTLLTGAPASANVRTLRWALSRIDGY
                     VGVTGVIGTMRGERLAAMTDQMEAVLAELAGRGLLYVDPREGSGPIPRTWGRHVDLVV
                     DDAADQGVADRAMIDSKLSALEQQARDAGSAVGLVMRPTPVAVARIAAWSNGLVDRGL
                     TLAPVSALVLPPADPAVKLSERQW"
     gene            728..1216
                     /locus_tag="VHX39_22595"
     CDS             728..1216
                     /locus_tag="VHX39_22595"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010506637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HEX3993971.1"
                     /translation="MSLLPYRPNVGAVLFNRAGLVLVARRADLPNAEAPAGGWQLPQG
                     GIDEGEDPQRAVLRELAEEIGTDRAEVIGEHGAWLTYDLPAELVGVALKGRFRGQRQR
                     WFALRFTGEDSDIRLDADPHPEFDAWRWIRLPELPGLAVPFKRAIYEVLVASFARFAE
                     RS"
     gene            complement(1325..3637)
                     /locus_tag="VHX39_22600"
     CDS             complement(1325..3637)
                     /locus_tag="VHX39_22600"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3993972.1"
                     /translation="MGFNRLKVRTRIYLGFAALVALGVGIAIFGVVRLSGVDLNVGKM
                     NALAGNIHRVLTVTRQLEAMRRAETRYLFEAPEDAMKDARTNANAADKLLIDTAAATL
                     SEERRKEYNAVRDTLRAHLANLDKFAALSTTWTSERAKLFTGGDTLTANANHLVDAAR
                     ATHNQAMSDAAAGVEAAVLLVRVANWRFLATLDKAGPATFKTNAERAHAAITTLQEVA
                     SPEVASLIAPVQASLAAYEASFAGYSTARLTSSSLYDDQTRPEIMAMQRQLDDAATSL
                     SRAFEDSRTVAVDTISGASFWQEILAVAALVIGTGMALVIGGGIVRPLAAMTGVMVKL
                     AAGDKSVDIPARDNTDEIGDMARAVEVFKEQAVEAERLAAEQDAARAAKERRQSAMEQ
                     HTQDFGSSISGVMASLAGSADEMRRAAEAMAESATSVHTEATGTAGAAAKSSRDLMAV
                     AAAVEQLTSSVAEISRQLASASEVAQQAVRRADSSHATMQGLSEATARIGDVVRLISD
                     IASQTNLLALNATIEAARAGEAGKGFAVVAGEVKVLAAQTAKATAEIGSQIDTVRSAT
                     SDAVTAMAEIGGIIGKINEVSSAIAAAVEQQNATTHEIAASVQAVSGATAGTASAMEH
                     VVMVADKAGSASQDVLGGAAEIGREAETLRAEVDQFLRAVRDESADERRRYERISANG
                     AMVGVRTKGRSPARMELRNIARGGAALVCDWTLPAGTMLDIELSEAVGGIPARVVRSG
                     GGELALIFNSEPQSLRRLDQYFAGLKKVAA"
     gene            4049..5707
                     /locus_tag="VHX39_22605"
     CDS             4049..5707
                     /locus_tag="VHX39_22605"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3993973.1"
                     /translation="MAEITGADLLAKSLKEQGVQFMFGVVGFPVGPLAEAAQRAGIPY
                     IGMRNEQTASYAAGAIGYLTGRPGSCIVVTGPGVIHGLAGLANAQQNCWPMMLVGGAS
                     ETYRNGMGAFQEERQVLAATPVCKWAHAIEHVNRIPFYVEMAVRQSIYGRPGSVYLDM
                     PDDIITGKCDTDKVHEAAKCPDPPRIQTMPQYVEQALDVLQSAQRPLVIIGKGMAFSH
                     AEDEVRAFIERTQLPFLASPMGKGVMPDDHPLSVGAARSLALQNADVVFLMGARFNWI
                     MHFGLPPRYNKDVKVIQLDIEPEAMHQNKPAEVALVGDGKAVVGQLNQALQNRQWFYP
                     KETAWHQAIAKKSSENAALIAPQIADDSAPGGYYRLLRDVSAWVPKNAIVCSEGASTM
                     DIGRTQLPNYLPRSRLDAGSYGTMGVGLGFVIAACVAHPDRPVVHVSGDSAIGFSGME
                     METMCRYGMPAKIVVFNNGGIGPGMEEIPSDPMLRMRPNSLIWGARYDLMMQAFGGHG
                     SYVEDPKDLRGALDEAMNTPGPALVNVKLSLGSQRKAQEFRWHS"
     gene            5810..6217
                     /locus_tag="VHX39_22610"
     CDS             5810..6217
                     /locus_tag="VHX39_22610"
                     /inference="COORDINATES: protein motif:HMM:NF027067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3993974.1"
                     /translation="MDGVLDKPVSVARRLYAAGLMLKSAHTVVNRLAETGFSVCRIAE
                     GADIPSLAADLATMNVHTFRHRSPKPSLIAEVRARHGLSQREFAEVLGLDIDTLQNWE
                     QGRNRPDHAALRLVMAFDKAPIVVTEAGFERVV"
     gene            complement(6226..>7044)
                     /locus_tag="VHX39_22615"
     CDS             complement(6226..>7044)
                     /locus_tag="VHX39_22615"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3993975.1"
                     /translation="VMLIVDSQIHIWENETMNPTHRQVPTYSADEALAEMREAGVDAA
                     ILHPPSTLPKTNATAIAAAKAHPDKFAILGHFAVEKPENRGLVATWKQQPGMLGFRFT
                     FNQPHQQSWWTDGTVDWLWAAAEKAGTPIGLLGAGHFGIIAKIAERHPGLRLQIDHMG
                     RGGAAKDDAAWANLDEMLALAKWPNVAVKLSGAPSYSSQSYPWRNIHDAIKRQFDAFG
                     PTRCFWGTDITRMPCSYRECVTMFTEELPWLKGRDLELVMGRAQCDWLGWDLKG"
BASE COUNT         1181 a         2220 c         2276 g         1367 t
ORIGIN      
        1 gccgtccgcg tattggcttg ctgctggccg gcatcggcat gaacgaggca gagagcgacg
       61 ccgcaattcg cacgctgccg ggcgccgttt cgcttgctgt gtcgccgtat gccgccgcgg
      121 atcggccgaa cctgccgaaa ctgctggcga ccgcgcgcac cacgggtcat gaatatttga
      181 tcgagatccc gctggagccc gccgggttcc cgttgaacga ccccggtccg tccacgctgc
      241 tgaccggcgc gccggcgtcc gccaatgtgc gaactctgcg ttgggctttg tcgcggatcg
      301 acggctatgt cggtgtgacc ggcgtgatcg gcacgatgcg cggcgagcgg ctggccgcca
      361 tgaccgacca aatggaggct gtgctcgccg aactcgctgg ccgcggcctg ctttacgtcg
      421 atccgcggga gggcagtggg ccgattccga gaacctgggg caggcacgtc gatctggtgg
      481 tcgacgatgc ggccgaccag ggcgtggcgg accgtgcgat gatcgacagc aagctttcgg
      541 cccttgaaca gcaggcgcgt gacgcagggt ctgctgtggg cctggtgatg cggccgacgc
      601 cggtggcagt ggcgcggatc gccgcctgga gcaacgggtt ggtggaccgc ggactgaccc
      661 tggcgccggt gtccgcgttg gtcctccccc cggccgaccc ggcggtgaaa ctatcggagc
      721 ggcagtggtg agtttgctgc cgtaccgtcc caacgttggc gccgtgctgt tcaatcgggc
      781 gggtctggtg ctggtggcgc ggcgggccga tttgccgaat gccgaggccc ctgcgggtgg
      841 ctggcaactg ccgcagggcg gcatcgatga gggcgaggat ccgcagcggg ccgtgctgcg
      901 cgaactggcc gaggaaatcg gcaccgatcg cgccgaggtg atcggcgaac acggcgcctg
      961 gttgacctat gatctgccgg cggaactggt tggggtggcg ctgaagggga ggtttcgcgg
     1021 gcagcggcaa cgctggttcg cgttgcggtt taccggggaa gacagtgaca tcaggctgga
     1081 cgctgatccg cacccggaat tcgatgcctg gcgctggatc agattacccg agcttcctgg
     1141 gctggcggtg ccgttcaagc gggcgattta cgaagtgctg gtcgcgagtt ttgcacggtt
     1201 tgccgaacgt tcgtgaccgg ggcgcgaatg ggctatcttc tggcgacctg cggtcggcgc
     1261 aagcgctgtc tgtttttagc gcttaacgat tgggacgccg accatggcga tttgcaactg
     1321 ccgctcaggc tgccaccttc ttcaaacctg caaagtattg gtcgaggcgc cgcagcgact
     1381 gcggttccga gttgaaaatc aaagcgagct ctccgccgcc tgatcggacc acgcgtgccg
     1441 gtatgccacc caccgcctcc gatagttcaa tgtcgagcat ggtgcccgcc ggcagtgtcc
     1501 agtcgcagac cagtgcggct ccgccacgcg cgatattgcg cagttccatg cgcgccggcg
     1561 accgcccctt cgttcgcacc ccgaccatcg cgccgttcgc cgagatgcgc tcgtagcgcc
     1621 tccgctcgtc cgcgctttcg tcccgcaccg cccgaaggaa ctggtcgacc tcggcgcgca
     1681 gcgtctcggc ttcacggccg atctccgccg caccgcccag tacgtcctgg ctcgcactgc
     1741 cagccttgtc ggccaccatg acgacgtgtt ccatcgcgga ggcggtgccg gcggttgcgc
     1801 ccgagacggc ctgcacactg gctgcgattt cgtgcgtcgt tgcgttctgt tgttcaacgg
     1861 ctgccgcgat ggctgacgag acttcgttga ttttgccgat gatgccgccg atttctgcca
     1921 tggctgtcac cgcatcgctg gttgcgcttc gcacggtgtc gatctggctg ccgatctcgg
     1981 cggtggcctt tgcggtctgt gcggccagca ccttcacctc gccggcaacc actgcgaagc
     2041 ccttgccggc ttcgccggct cgcgctgcct cgattgtcgc gttcaacgcc aacagattgg
     2101 tttgactggc gatgtcactg atcaggcgca ccacatcgcc aatccgtgcg gttgcctcgg
     2161 acagtccctg catcgtggcg tgacttgagt cggcgcgccg cacagcctgt tgcgccacct
     2221 ccgacgccga agccaactgt cgtgagattt ccgcaacgct ggaggtcaac tgctccaccg
     2281 ccgctgccac cgccatcagg tctcgtgatg atttggccgc tgcgccggcg gtgccggtgg
     2341 cctcagtgtg caccgacgtt gcggattcag ccatggcctc ggcggcgcgg cgcatctcgt
     2401 cggcggatcc ggccagcgag gccatcacgc cggagatcga actgccgaag tcctgcgtgt
     2461 gctgctccat cgccgactgc cggcgctcct ttgcggcccg cgcggcatct tgttcggcgg
     2521 ccagacgttc tgcctcgacg gcctgttcct tgaacacttc cactgcgcgc gccatgtcgc
     2581 cgatttcgtc ggtgttgtcg cgggccggaa tatcgacact tttgtcgcca gcggcgagtt
     2641 tgaccatcac accggtcatg gctgcgagcg gccggacaat gccgccaccg atcaccaagg
     2701 ccatgccggt gccgatgacc aacgccgcga ccgccagaat ctcctgccaa aatgatgcgc
     2761 cggagatcgt atccactgcg accgtgcggc tatcctcaaa ggctcgggag agcgatgttg
     2821 cggcgtcatc aagttggcgc tgcatggcca tgatctccgg ccgcgtctgg tcatcgtaca
     2881 agctgctgga ggtcaggcga gcagtggagt accctgcaaa gcttgcctca taggctgcca
     2941 gtgacgcctg caccggcgcg ataagggatg cgacctcggg actggccact tcttgcagag
     3001 tggtgatcgc ggcgtgtgcg cgttcggcgt tggtcttgaa cgttgccggt ccagccttgt
     3061 cgagcgtggc cagaaagcgc cagttcgcca cgcgtacgag caatacggct gcctcgacgc
     3121 ctgcggctgc atccgacatc gcctgattgt gggtggcacg cgccgcgtcg accaggtgat
     3181 tggcattcgc agtcaacgta tcaccgccag tgaacagttt agcgcgctcc gaggtccacg
     3241 tcgtgctgag cgcggcgaat ttatcgagat ttgcaaggtg ggcgcgcaac gtgtcccgca
     3301 cggcgttgta ttccttccgg cgctcctcgg acagcgtggc cgccgcggtg tcgatcagca
     3361 gcttgtcggc cgcgttggca ttggtccgag cgtctttcat ggcgtcttcg ggcgcttcaa
     3421 acaaataccg tgtctccgca cggcgcatcg cctcaagctg gcgtgtaacg gtcagtacgc
     3481 gatggatatt ccccgccagt gcgttcattt tgccaacgtt cagatcgacg ccggaaagcc
     3541 gcacgacacc gaagatggcg atgccgacgc ccagagcaac gagcgccgcg aagccgagat
     3601 agatgcgagt acgcaccttc agacggttga aacccatgtg cgccttccgt tgcatgcatc
     3661 gccggggaaa gcacattcgc tgaaattcat gaacgttcgg taaacgcccg gcgcggtttt
     3721 tgccatgctc gcggtcaccg cccgaagcgt tgtttgagac cgtcggcatg gcgcccggat
     3781 cgactgatcg tggtatcgcc ccgtcgccaa tggccggagc tgctttatgg cagacctcag
     3841 cccagtgcga actgatggca accttttcca gtttgcctta acgatggttg cgcatgtccc
     3901 gagctccgtg agttcgtgcc ggaattccaa cgatcttgcg cagccaacgc ctccggttgc
     3961 cgtggcgcca caaaagggta atctgcccag gcttcagact ttatcgggaa ccgggcccaa
     4021 tcgcggcggc cggatgacag gaggaaacat ggcagagatc acaggcgccg acttactggc
     4081 gaaaagcctc aaagaacaag gcgtgcaatt catgttcggc gttgtcggct tcccggtggg
     4141 tccgctcgcc gaggccgcgc aacgggccgg catcccatac atcggcatgc gcaacgagca
     4201 gaccgcgtcc tatgccgccg gcgccatcgg ctatctgact ggccggcccg gctcctgcat
     4261 tgtggtgacc ggtccgggcg tgatccacgg cctcgccggc ctcgccaatg cgcagcagaa
     4321 ctgctggcca atgatgctgg tcggcggcgc gtcggaaaca tatcgtaacg gcatgggcgc
     4381 cttccaggag gagcgtcagg tgctggccgc cacaccggtc tgcaaatggg cacacgccat
     4441 cgagcacgtg aaccgcattc cgttctatgt cgaaatggct gtccggcaat cgatctacgg
     4501 cagaccgggt tccgtctatc tcgacatgcc cgacgacatc atcacgggca aatgcgatac
     4561 tgacaaggtg cacgaggcgg cgaaatgccc cgatccacca cgcatccaga ccatgccgca
     4621 atacgtcgag caggcgctgg acgtgctgca atcggcgcaa cgcccgctgg tgatcatcgg
     4681 caaaggcatg gccttctcgc acgccgagga cgaggtccgc gcattcattg agcgtacgca
     4741 actaccgttc ctcgcctctc cgatgggcaa gggcgtgatg ccggacgatc atccgctgtc
     4801 ggtcggcgcg gcgcgcagtc tcgcgttgca aaatgctgac gttgtgttcc tgatgggcgc
     4861 gcggttcaac tggatcatgc atttcggcct gccgccgcgg tacaacaaag acgttaaggt
     4921 catccagctc gacatcgagc cggaggcgat gcaccagaac aagccggcgg aggtcgcgct
     4981 ggtcggcgac ggcaaggcgg tcgtcggaca gctcaatcag gcactgcaga accggcagtg
     5041 gttctacccg aaggagacgg cgtggcatca ggcgatcgcc aagaagtcgt cggaaaacgc
     5101 ggcactgatc gcgccgcaaa tcgccgatga ttcagcgccg ggtggctact accggctgct
     5161 gcgggacgtt tccgcctggg tgccgaagaa cgcgatcgtc tgcagcgagg gcgccagcac
     5221 gatggatatc ggccgcactc agttgccgaa ctacctgccg cgctctcggc tcgatgccgg
     5281 cagctacggc acgatgggcg tcggtctcgg gttcgtgatc gcggcctgcg tggctcaccc
     5341 tgaccggccg gttgtgcatg tctcgggcga ctcggcgatc ggcttctccg gcatggaaat
     5401 ggagacgatg tgccgttacg gcatgccggc caagatcgtg gtgttcaaca atggcggcat
     5461 tgggccgggg atggaggaaa tccccagcga tccgatgctg cggatgcgac cgaattcgct
     5521 gatctggggc gctcgttacg atcttatgat gcaggccttc ggcggtcatg ggtcgtatgt
     5581 tgaagatccc aaggacttgc gcggcgcact tgacgaagcg atgaacaccc ctgggcccgc
     5641 gctcgttaac gttaagctca gcctgggctc gcagcggaag gcgcaggagt tccgctggca
     5701 tagttgaagg ttcattctgc cccgccgggg tgaactggtg aacgcgaatg tgggctgtcc
     5761 gggagggcgg cccacatttt ttgtcgggtt cgctcgcgcc acgcttaggt tggatggcgt
     5821 cctggacaag cccgtttctg ttgcgaggcg gctttatgcc gccgggctga tgctgaaatc
     5881 ggcacacacc gtcgtcaatc gcctggcgga aaccggcttc tcggtgtgcc gtatcgcgga
     5941 aggcgcagac attccatccc tggccgccga tctcgcgaca atgaatgtcc acactttccg
     6001 tcaccgttct ccgaaaccca gcctgatcgc cgaggtcagg gcgcgtcacg gcctgtcgca
     6061 gcgcgaattc gccgaagtgc tcggcctgga tatcgatacg ctgcagaact gggagcaagg
     6121 acgtaatcgc cccgaccacg ccgcgttgag gctggtaatg gccttcgaca aggcccccat
     6181 cgtggtgacg gaggccggct tcgagcgtgt cgtctgaccc tgggcttacc ccttcagatc
     6241 ccaccccagc caatcgcatt gcgcgcggcc catcaccagc tcaaggtcgc ggcccttcag
     6301 ccacggcaat tcctcggtga acatcgtgac gcactcgcga taggaacatg gcatccgcgt
     6361 gatgtcggtg ccccagaagc agcgcgtcgg accgaacgcg tcgaactggc gtttgatcgc
     6421 atcgtgaatg ttgcgccatg gataggactg gcttgagtag ctcggcgcgc cggacagttt
     6481 gaccgcgacg ttaggccact tcgccagcgc cagcatttca tcgagattgg cccaggctgc
     6541 gtcgtccttg gcagcgccgc cgcggcccat gtggtcgatt tgcaggcgaa gaccgggatg
     6601 ccgttcggcg attttcgcaa tgatgccgaa atgaccggcg ccaagcaatc caatgggcgt
     6661 gccggccttt tccgctgccg cccatagcca atcgaccgtg ccgtcggtcc accagctttg
     6721 ctgatgcggt tggttgaagg tgaaacgaaa ccccagcatc ccaggttgct gcttccaggt
     6781 cgcgaccagc ccgcggttct ccggtttctc gaccgcgaaa tgaccgagga tggcgaactt
     6841 gtccggatgc gcttttgccg ctgctatcgc cgtggcattg gttttcggca aagtactcgg
     6901 tggatggagg attgccgcat cgaccccggc ctcgcgcatt tcggcgagtg cttcgtcggc
     6961 cgagtaagtg ggcacctggc ggtgcgtcgg gttcattgtc tcattctccc agatatggat
     7021 ctgggaatcg acgatcagca tgac
//
LOCUS       DATAVD010001187         4628 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2720569, whole genome shotgun sequence.
ACCESSION   DATAVD010001187 DATAVD010000000
VERSION     DATAVD010001187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4628
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2720569"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1009
                     /locus_tag="VHX39_22620"
     CDS             <1..1009
                     /locus_tag="VHX39_22620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014106396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3993976.1"
                     /translation="VNHAAEQFLGISASHLAQMRLSELVPQDSPLFLLIEQVRQTESS
                     VANHDLTLDSPRLDKRGITVMGSPLSEEPGAVVLVLQDSSGALALDRQLAFRGAARSV
                     TGMAAVLAHEVKNPLSGIRGAAQLLETSVVDADRELTVLIRDEADRIRALVDRMEAFS
                     EKPISRTAVNIHRVLEHVRRLAQTGFAENIRFQENYDPSLPPVWGNRDQLIQVVLNLV
                     KNAAEAIAWAGPATAHPEIVLSTGFQHGMRIAVPGTSERVNLPLYVAIRDNGPGIPED
                     IRPHLFEPFVTSKASGSGLGLSLVAKIIGDHGGLIEVDSKPGRTEFRLHLPVVTEKDD
                     D"
     gene            1009..2466
                     /gene="ntrC"
                     /locus_tag="VHX39_22625"
     CDS             1009..2466
                     /gene="ntrC"
                     /locus_tag="VHX39_22625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(I)"
                     /protein_id="HEX3993977.1"
                     /translation="MTPPTVLIADDDRSIRTVLTQALGRSGYQVRSTGNAATLWRWVE
                     DGEGDLVITDVVMPDENGLDLIPRIKRIRPDMRVIVMSAQSTLMTAVKAAQRGAFEYL
                     PKPFDLQELIAVVGRALSVPAEHIVTPPEPRDSEERLPLIGRSASMQEIYRTIARLTT
                     ADLTVMINGESGTGKELVARALHDYGKRRAGPFVAVNMAAIPRELIESELFGHERGAF
                     TGATNRSQGRFEQANGGTLFLDEIGDMPPEAQTRLLRVLQEGEFTSVGGRQPIKANVR
                     IIAATHRDLRNSIRLGQFREDLFYRLNVVPIRLPPLRERAEDIPLLARHFLERAREDG
                     LPMKTLDQSAVDRLKQHGWPGNVRELENLMRRLAALCPEETINGDIVGAELAEATPTP
                     LSAADLPARDDPETLSRAVERHIKEFLAAHDDGMAITGVYDKIIAEVERPLIRLTLAA
                     TRGNQIKAAAMLGLNRNTLRKKIRDLEIPVIRGVM"
     gene            2773..>4628
                     /locus_tag="VHX39_22630"
     CDS             2773..>4628
                     /locus_tag="VHX39_22630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEX3993978.1"
                     /translation="MPLPLSFRASTLSHLGRILVSKTMTFVLAAFALAVGLSTFIILA
                     RGSPLGLEAGTGTALVMGNITVLLLLGAVLAGRLTRVWVERRRGSAGSQLHVRLVLLF
                     SGVAIAPTILVACFAVVFFHFGIQAWFNDPVRTALAESLQVSRGYLEEHRNTIRSDAL
                     EMANDLANAGQYLAADPSVFVNVLDTQTTLRGLTEAVIYEPNTGQILAAAGLFVGFGV
                     EPPPLDVSRQALTGDVQVINAGDGTRVRAVVRLNATPPLLLMIGRPVDPKILGYMSRT
                     EQAVSEYQRLDQSRSWLQIAFAWIFAVVALLVLLAAALIGLVMANQIARPIGTLINAT
                     ERVRGGDLGVRVREGQTRDELSGLSRAFNRMTGQLAAQRAELMEAYSQIDGRRRFTET
                     VLEGVSAGVIGLDSLGRIELPNRTAAELLGVDLLAAIGRDLGEVIPEFSELIAAARAA
                     PDRPRTEEARIGPASKPRTLLVRIGAELTSGRVNGFIVTFDDITELQLAQRKAAWADV
                     ARRIAHEIKNPLTPIQLAAERLKRRFTKEITSDPDTFSQCADTIIRHVGDIGRMVDEF
                     SAFARMPQPVIRPENLGQIVRETLILQRTALPQIAWSSDIPERGPVVPCDRM"
BASE COUNT          823 a         1458 c         1459 g          888 t
ORIGIN      
        1 ggtcaatcac gccgccgagc agttcctcgg catttcggcc tcccacctgg cgcaaatgcg
       61 gttgtccgaa ctggttccgc aggacagccc gttgtttctg ctgatcgagc aggtgcggca
      121 gaccgaatcc tcggttgcca atcacgacct gaccctggac agccccaggt tggacaaacg
      181 cgggatcacc gtaatgggct cgccgctgtc cgaggaacct ggtgccgtcg tgttggtttt
      241 gcaggattct tcgggcgcgc tggcgctcga tcgccagctc gcattccggg gcgcggcgcg
      301 tagcgtcacc gggatggcgg cggtgcttgc gcatgaggtg aagaacccgc tttccggcat
      361 tcgcggcgcc gcgcagttgc tggaaaccag tgtggtcgac gccgatcgtg aactgaccgt
      421 gctgatccgt gatgaggccg accgcatccg cgcgttggtc gaccgcatgg aggcgttttc
      481 ggaaaagccg atctcgcgga ccgcggtcaa catccatcgc gtgctggagc atgttcgccg
      541 gctggcgcaa accggtttcg cggaaaacat ccggtttcag gaaaactacg acccgtcgtt
      601 gccgccggtc tggggcaacc gcgatcaatt gatccaggtc gtcctcaacc tggtgaagaa
      661 cgctgccgaa gcgattgcct gggccggacc ggccacggcg catcccgaga tcgtgctgag
      721 taccggcttt cagcacggta tgcgcatcgc cgtgccaggc acctcggagc gggtcaattt
      781 gccgttgtat gtcgccattc gcgacaacgg acctggcatc ccggaggata ttcgcccgca
      841 tctgttcgaa cccttcgtga cgtccaaagc ttccggcagc gggctcggcc tgtcgctggt
      901 ggcaaagatc atcggcgacc atggcggcct gatcgaggtc gacagcaagc cggggcgcac
      961 tgagttccgt ttgcatttac cggtcgttac cgagaaggat gatgactgat gacgccgccc
     1021 actgtgctca tcgccgacga cgaccgttcc atccgtacgg tgctgaccca ggctttgggc
     1081 cgctccggct atcaggtgcg cagcaccggc aatgccgcaa ccttgtggcg ctgggttgaa
     1141 gacggggagg gcgatctggt catcaccgac gtggtgatgc cggatgaaaa cggcctcgat
     1201 ctgatcccgc gcatcaaacg catccgcccc gacatgcgcg tcatcgtgat gagtgcccaa
     1261 tcgaccctga tgaccgcggt caaagcggcg cagcgcggtg cttttgaata tctgccaaaa
     1321 cccttcgacc tgcaggaact gatcgccgtt gtcggccgtg ccttgtcggt gcccgccgag
     1381 cacattgtca ccccgcccga accccgcgat tccgaagaac gcctgccgct gatcggccgc
     1441 agcgcgtcga tgcaggagat ctaccggacc attgcccgcc tgacgaccgc cgacctgacg
     1501 gtcatgatca atggcgaatc aggcaccggc aaggaattgg tggcgcgtgc gctgcacgac
     1561 tacggcaagc ggcgagcggg tccgttcgtc gccgttaaca tggcagcgat ccctcgcgaa
     1621 ctgatcgaga gcgaattgtt cggccacgag cgcggcgcct tcaccggtgc caccaaccgg
     1681 tcgcagggtc gtttcgagca agccaatggc ggcactctgt tcctcgatga gatcggcgac
     1741 atgccgcccg aggcgcagac ccgcttattg cgcgttttgc aggagggaga attcacctcg
     1801 gtaggcggcc ggcagccgat caaggccaac gtccgcatca ttgcagcgac gcaccgcgac
     1861 cttcggaact caatccggct cggacaattc cgcgaggacc tgttttatcg tctgaatgtg
     1921 gtgccgatcc ggctgccacc cctgcgcgaa cgcgccgagg acatcccgct gctggcacgg
     1981 cattttctcg agcgggcgcg tgaggacggg ttgccgatga agacgctcga ccagtcggcg
     2041 gttgaccgat tgaagcaaca tggctggccg ggcaacgtgc gtgagctgga aaacctgatg
     2101 cgccggctgg cagcactttg cccggaggaa accatcaacg gcgacatcgt cggcgccgaa
     2161 ctggccgagg ccacgcccac gccgctgtcg gccgccgatc tgccggcgcg cgacgatccc
     2221 gaaacactgt cgcgggcggt ggaacgacat atcaaggagt tcctcgccgc gcatgatgac
     2281 ggaatggcaa tcactggcgt ctacgacaag atcattgccg aggtggagcg gccacttatt
     2341 cggctgacct tggctgcgac ccgcggcaac cagatcaagg ccgctgccat gctgggcctc
     2401 aatcgtaaca ccttgcgcaa gaagatcagg gatttggaga ttccggtcat tcggggggtg
     2461 atgtgagcgg caatcttgca gctgactggt gcacgatagc ggatgagtcc ggttttgctg
     2521 tcgcatggcc tggcactggc gtgaatctcg cccgcgcgga atcctgatgc gatgaacatc
     2581 ttctcgcccc gaggagctct gataaaaaag gcccagacgg gcgaaaccca accgcctggc
     2641 caaacggcgc gtgagcgttc gaacgatgga tcggcggaat ccgctgacgg caccgctgtt
     2701 tcaggcaggg ccaacgctgg tctgacggct tccgattcgg tggtgcccgc gccctggacc
     2761 gccgaaccgc ccatgccgct gccgctcagc ttccgggctt cgacattgtc gcacctggga
     2821 cggattctgg tcagcaaaac catgacgttc gtgctagcgg cgttcgcgct tgcggttggt
     2881 ctctcgacct tcatcatcct ggcgcgcggc tcgcctttag gtctggaggc cggcaccggg
     2941 accgccctgg tgatgggcaa catcaccgtc ctgctgcttc tgggtgccgt tcttgccggc
     3001 cggctgaccc gggtttgggt ggagcggcgg cgcggctcag ccggatcgca actccatgtc
     3061 cgcctcgtgc tgctgttcag cggtgttgcc atcgccccca ccatcctggt cgcgtgcttc
     3121 gccgtcgtgt tcttccactt tggcatccag gcctggttca acgacccggt gcgcacggca
     3181 ctggccgagt cattgcaggt ctcgcgcggc tatcttgagg agcatcgcaa cacgattcgc
     3241 tccgatgcgt tggaaatggc caatgatctg gccaatgccg gtcagtatct cgccgccgat
     3301 ccatcggttt tcgtgaatgt gctagatacc caaacaacct tgcgcgggct gaccgaggca
     3361 gtgatttacg agcccaatac cggccaaatt ctggccgcgg ccgggttgtt cgttggtttc
     3421 ggggtcgagc cgccgccact cgacgtgtcg cgccaggcgc tgaccggcga tgttcaggtg
     3481 atcaacgctg gcgacggcac gcgcgtccgg gctgtggtgc gactgaacgc aacacccccg
     3541 ctgctgctga tgatcggccg gccggtcgat ccgaaaatcc tcggctacat gtcccgaacc
     3601 gagcaggcgg tatcggaata tcaacggctc gaccaaagcc gttcctggtt gcaaattgcg
     3661 tttgcctgga tttttgcggt cgtcgctttg ctggtgctgc tggcggcagc gttgatcggc
     3721 ctggtcatgg ccaaccagat cgctcgccca attggcaccc tgatcaatgc aacagaacgc
     3781 gtgcggggcg gcgatctcgg tgtgcgcgtg cgggaagggc agacccgcga cgaactctcc
     3841 gggctgtcgc gtgcgttcaa tcgcatgacc ggccagcttg cggcgcaacg ggccgaactt
     3901 atggaggcat acagccagat cgatggccgc cgccggttca ccgagacggt gctggaaggc
     3961 gtctccgccg gcgtgattgg cctcgattcc cttggccgga tcgagttgcc caaccgcact
     4021 gccgccgaac ttctgggtgt ggatctgctt gccgcgatcg gccgcgacct tggcgaggtg
     4081 ataccagagt tttccgagtt gatcgctgcc gcgcgggctg caccggatcg tccgcggacc
     4141 gaggaagcgc gcatcggacc agccagtaaa cctcgcacgt tgctggtgcg gatcggtgcc
     4201 gaactgacct ccggccgggt caacggcttt atcgttacat tcgacgacat cactgaactg
     4261 caacttgcgc aacgcaaggc cgcctgggcc gacgtggcac gccgcattgc acacgagatc
     4321 aagaacccgc tgacaccgat ccaacttgcc gccgagcgcc tgaagcgtcg ttttaccaag
     4381 gaaattacgt ccgatccgga caccttcagt cagtgcgccg ataccatcat tcggcatgtc
     4441 ggcgatatcg gccgcatggt tgacgagttt tctgcctttg cccggatgcc gcagccggtg
     4501 ataaggccgg aaaatctcgg tcagatcgtg cgcgaaacgt tgatcctgca acgcacggcg
     4561 ctgcctcaga tcgcctggtc cagcgacatt ccggagcgtg gaccggtcgt gccgtgcgat
     4621 agaatgat
//
LOCUS       DATAVD010001188         2188 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1044187, whole genome shotgun sequence.
ACCESSION   DATAVD010001188 DATAVD010000000
VERSION     DATAVD010001188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2188
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1044187"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..230
                     /locus_tag="VHX39_22635"
     CDS             <1..230
                     /locus_tag="VHX39_22635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993979.1"
                     /translation="FDARRIALRSMTRITGDGVLAAGAGAGAPGGAAFAAKVESVAAI
                     ASAATDETARAVVLVVFMDLESCPCTETNDL"
     gene            complement(192..>2188)
                     /gene="bamA"
                     /locus_tag="VHX39_22640"
     CDS             complement(192..>2188)
                     /gene="bamA"
                     /locus_tag="VHX39_22640"
                     /inference="COORDINATES: protein motif:HMM:TIGR03303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEX3993980.1"
                     /translation="SEKDQTKEVQLKPRTVFTRAKVQADVARIIELYRRNGKFAATVD
                     PQVIQRPQNRIDLIFSINEGPTTGVARISFIGNKIFDDDTLKAQIATEESEWWKFLSS
                     NDNYDPDRLTFDREQLRRFYIKRGYADFKVVSAVAELSPDRQNFYITFTVDEGQLYHF
                     SKVEIQSNIKELTPQALRPLVPIADGSIYNAEQIDKAIDVLTNAAGTKGYAFAEIHPR
                     VKRNRDTHTIDVIFNIEQGPRVYVEKINITGNTRTLDKVIRREFRLVEGDAFNRVLVD
                     RSRTRIRGLGFFKTVDIKQAPGSQPDRTVLNVNLVEQSTGSLSLGAGYSSTSSFVGSF
                     SYTQSNLFGRGQSLQASVQLSYISKEFQLSFTEPYFMDRPIAAGFDLYKILTEFDQAD
                     YQSDTNAASLRLGFPTSEFASVNLRYTFRTDKISPYVGAPLAIQLAAGTADTSSFGYT
                     YSYNTLDDFLKPAHGFTFNFSQDIAGFGGTLKYLRSTTSASWYHPLFDGSWVAKLAFQ
                     GGYIQGYGGQHVRLNERNFKGGDDFRGFNLAGVGPREINVKGSGGQSAIGGEAFAIGT
                     AEVRLPNWLPADYGITLSLFSDFGTVGHIAGYSGIPSCGDVGPNIPCVKDNLAFRASG
                     GLAIGWKSPFGPIQIDVGMPFIRESYDKSQVIRFSAGTGL"
BASE COUNT          440 a          600 c          678 g          470 t
ORIGIN      
        1 ccttcgacgc gcgaaggata gcgttgcgat caatgacaag aataaccggt gacggcgtgc
       61 tggccgcggg tgccggagcg ggtgcacccg gcggtgcggc gttcgccgcg aaagtcgaaa
      121 gtgtggccgc aatagcgagc gccgccacgg atgaaaccgc gcgtgcggtc gttctggtcg
      181 tcttcatgga tttagagtcc tgtccctgca ctgaaacgaa tgacctgtga cttatcataa
      241 ctttcccgaa taaagggcat gcctacgtca atttgtatcg gtccgaaagg cgatttccag
      301 ccaatggcta atccacccga cgcgcggaag gccaaattgt ccttaacgca tgggatgtta
      361 ggtccgacgt cgccgcagga cgggattcct gaataacccg caatgtggcc gaccgtgccg
      421 aaatcgctga acagcgacaa tgtgatgccg tagtccgctg gcagccagtt cggcagccgg
      481 acttccgccg tcccgatcgc aaaggcctcg ccgccgatgg cgctttgacc gcctgagcct
      541 ttcacattga tttcgcgcgg gccgaccccg gccaggttaa agccacggaa atcgtcgccg
      601 cctttgaagt ttcgctcgtt caggcgcaca tgctggccgc catagccttg gatgtacccg
      661 ccctggaacg cgagtttcgc gacccatgac ccgtcgaaca gcgggtggta ccaactcgcg
      721 ctggtcgtgc tgcgcagata tttgagcgtg ccgccgaagc ccgcgatgtc ctgactgaag
      781 ttaaaggtga agccgtgtgc cggcttcagg aagtcgtcca gcgtattgta cgaataggtg
      841 tagccgaagg acgacgtgtc tgcggtgccg gccgcgagct ggattgcgag cggcgctcca
      901 acataaggcg agattttgtc ggtacgaaac gtgtagcgca aattcacgct cgcaaattcc
      961 gaggttggga agcccaaacg caagctcgcg gcattggtat cggactgata atcggcttgg
     1021 tcgaactcgg tgagaatttt gtagagatcg aacccagccg caatcggacg gtccataaaa
     1081 tatggctccg tgaagctgag ctggaattct ttgctgatat aagaaagctg cacgctggct
     1141 tgcagcgact ggccacgccc gaacaggttg ctctgggtgt agctgaacga accgacgaac
     1201 gaactggtcg atgaatagcc ggcgcccagc gacaacgaac cggtcgactg ctccacaagg
     1261 ttgacgttca gcaccgtgcg atcgggctgg ctgcccggcg cctgcttgat gtcaaccgtc
     1321 ttgaaaaacc caagacccct gatgcgggta cgcgaacgat ccacgagcac gcgattgaag
     1381 gcgtcgcctt ccaccaagcg aaattcgcgt cggatgacct tgtcgagcgt gcgcgtgttg
     1441 cccgtgatgt tgatcttttc gacataaacg cgcggcccct gctcgatgtt gaaaatcaca
     1501 tcgatggtgt gggtgtcgcg gttgcgcttc acgcgcggat ggatttcggc gaaggcatag
     1561 ccctttgttc ccgccgcatt ggtaagaacg tcgatcgctt tgtcgatttg ctcggcgttg
     1621 tagatgctgc cgtcggcgat cggcaccagg gggcgcagcg cctgcggcgt cagctccttg
     1681 atgttcgatt gaatctcgac cttgctgaaa tgatagagtt ggccttcatc aacggtgaag
     1741 gtgatgtaga agttctgccg atccggcgaa agctcggcaa cggcggacac gactttgaag
     1801 tcggcatagc cgcgcttgat gtagaaccgg cgcagctgct cgcggtcgaa ggtcaagcga
     1861 tccgggtcgt agttgtcgtt cgaggagagg aatttccacc actccgattc ttcggttgcg
     1921 atctgtgcct tcagcgtgtc gtcgtcgaaa atcttgttgc cgatgaacga aatgcgggcc
     1981 acgcccgtgg tggggccttc gttgatcgag aagatgaggt cgatgcggtt ttgcggccgc
     2041 tggatgacct gtggatctac cgtcgcggcg aatttgccgt tgcggcgata gagctcgata
     2101 atgcgggcga cgtcggcctg caccttggcg cgtgtgaaaa ccgtacgcgg cttgagctgc
     2161 acttccttgg tctggtcttt ttcggaga
//
LOCUS       DATAVD010001189        10254 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1975608, whole genome shotgun sequence.
ACCESSION   DATAVD010001189 DATAVD010000000
VERSION     DATAVD010001189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10254
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1975608"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /locus_tag="VHX39_22645"
     CDS             <1..356
                     /locus_tag="VHX39_22645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993981.1"
                     /translation="GSSGSGPPSSIVTAVTTQSSGLVTSITWNMVPSGSYAHGSGVIG
                     INAHVNPANATIQFGFSTSTNTPPTAWLTATYVNTDLWGQYMPTPATAGTWYAWAEGT
                     DGSAASVYPTPFTVT"
     gene            complement(392..700)
                     /locus_tag="VHX39_22650"
     CDS             complement(392..700)
                     /locus_tag="VHX39_22650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993982.1"
                     /translation="MRAVVADSGDRAAFDAWYRNEHLPDAVKAFSANTAWRGWSSTDP
                     SIHCAYYRFESHDRLEAVMSGLAIKMLIAEFDRCWSGRVTRTREVLTVADEFEVRQGR
                     "
     gene            complement(724..1653)
                     /locus_tag="VHX39_22655"
     CDS             complement(724..1653)
                     /locus_tag="VHX39_22655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX3993983.1"
                     /translation="MKLAFFDDFKLGVVKGDSIVDVSAVVQDIPHAGPGDLISGLIAR
                     FDAYRGKLEAASAGAGVALSSVRVRPPLPKPGNIVCMAVNYMENGTLAKPAPINAFHK
                     APTSIIGPNDTMVLPDVPATIFEGEAEMALVIGKRATNVPASRAMDYIFGYINFIDGS
                     ARGLPPPGNVFFQMKSRDTFAPIGPYLVTKDEIADPQKLPIKLWVNGELKQDFNTDDM
                     AHNIARCIEWASSIHTLEPGDILATGTNHRGLSSFMDGDVVELETQGLGRLRFNIRDE
                     LKRTWLRETRLDRQQKGQEGPTPQVSGKHAKTG"
     gene            2087..3616
                     /locus_tag="VHX39_22660"
     CDS             2087..3616
                     /locus_tag="VHX39_22660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993984.1"
                     /translation="MPTDHGEMDSADRHPSSNWSKGNSMPLTLTLTTPLTTEEKLILS
                     GIATAEGTSSGGTLTTPTIPVVNNFPLTAAGLPDILNATKPSPENSEILIVSGKVTGA
                     PYLVDNTGGVWTLTINAAGLGVAFIDSTQIGGGGAGQGIDQLIVRTGLVFCVLVGGQV
                     QLWNQSQGSLYNATLPAAFTTPATATTPALPALPALPATPAVMGGTSGTVINCGAGQT
                     LATITAGINAAAAGDKVQVAKATYYEALPELCVPIMLDLGGSTLSGTGLTASLAGGGL
                     GLIVPDAPGCIVQNGTITDVAMDQTSGQMTAAVRPNGGCTYLETNNLTCTANQNGFAS
                     GGYPIVWIDNGSTLHNNGLGDAAGSTHNAYFSTASGAQTTLNNTTSVIDPTASGPLGL
                     LQGHAIKCRQEHGIIVNGGTFAAPLATIFDIPNGSTTPVQLNGATLNKTATDGNHAIL
                     GYGMESQTNGLDGVIINGGTINACCASPLWQGTGGTITIDANVVLTGNPISAAGVTVS
                     A"
     gene            complement(3873..4859)
                     /locus_tag="VHX39_22665"
     CDS             complement(3873..4859)
                     /locus_tag="VHX39_22665"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3993985.1"
                     /translation="MHLKLDDRLRIGIQTIHRRTEPATGPWLPTIDDLAAFVNLVDRC
                     GYDSLWVGDHISFAVPIFDPMLQLAQAAVVSRRLTLGTGVLLLPLRHPTPVAKQVTTL
                     DHLTEGRLILGVGVGGEFPKEYAACDVPHSERGARLAEGVQVLRKFFSGEPVSHHGRF
                     YGPFDDVPMRPPPRQPGGPPIWFAGRKEAALRRIGRLGDGYLAYVITPAMYAAALETI
                     AAAASDANRSPERFGTGHLLFTRLDNTYEAALDRATETLSVRYAMDFRKPAARYCALG
                     TPEQVVERIREFHAAGVRHVVLDLLGPYEERQRQIEWFATDALPLLADLRAG"
     gene            4949..5731
                     /locus_tag="VHX39_22670"
     CDS             4949..5731
                     /locus_tag="VHX39_22670"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX3993986.1"
                     /translation="MPDLIETVENGIAILTLNRPERLNALSMDIRNGLLEALERLGHD
                     NSVGCIILTGAGRAFCAGGDVKSMGERAAAGFEQRAAGIQFSNRIPRLMRTLPKTVIA
                     MVNGVAVGAGLSMALACDLRVAARSARFGTGFLKIGLSGDWGGTWTLTRLVGTAKARE
                     LYLLGDMISADEALIHGMVNRVVDDADLLSTTMAMARRIADLPQIAVGYAKRNLNAAE
                     TGDFQTVLDMEAFNQARCSQTEDHREAVKAFTEKRRPVFHGR"
     gene            complement(5834..6649)
                     /locus_tag="VHX39_22675"
     CDS             complement(5834..6649)
                     /locus_tag="VHX39_22675"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3993987.1"
                     /translation="MLIIDAQVHIWGSGKPSAHHRQTSVFTAEELIKEMDEAGVDGAV
                     LHPPSWDAGSNEMAIEAAKNYPEKFCSLGWFALNDPSQRQRIETWKEQPGMLGLRWSL
                     TREGQETWHEDGTMDWLWPAAEKAGTPIATMAWRFLPFFGQIAERHPQLKLIIDHLGV
                     IRSAKDDAAFANLAPLVALAQYPNVAVKATGAPSHSSAAYPFKNIHDGLHRIYDAFGP
                     RRFFWGTDITRMPCSYRQCVTMFTEELPWLKGRDLELVMGQGVIDWLGWKRPA"
     gene            6780..7553
                     /gene="surE"
                     /locus_tag="VHX39_22680"
     CDS             6780..7553
                     /gene="surE"
                     /locus_tag="VHX39_22680"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: protein motif:HMM:NF001490.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEX3993988.1"
                     /translation="MLDRIILTNDDGIDAPGMAVLEEIAVQIAKEVWVVAPEHDQSGQ
                     SHAISLHHAIRVSERGVRRFGVTGTPGDCAAMGICHLMKDAPPQLMLSGVNRGVNLGI
                     ETVFSGTVGGAMTAMMLGVPAIALSQAFTDRRNVPWDTARTLGARTIQYLVETGWAKG
                     ACLNVNFPPIPADEVGPIALARQGEGLIAGMVVETRVDPRGLSYHWLNFQRSDRQQSP
                     GTDYSAMRAGRIVVTPLRYDRTDEDAFNELAQKLPKFEG"
     gene            complement(7703..8041)
                     /locus_tag="VHX39_22685"
     CDS             complement(7703..8041)
                     /locus_tag="VHX39_22685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014189588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEX3993989.1"
                     /translation="MPPPTDDVKNWMNMFRWIVKMIRDEYEIDEAILTRTAKLETDCG
                     LVIEQLEAIIAIVAQSFSLGFPPSTLDEVVQLEELCMLAAWMKGLYKRPPFISDDFEA
                     TCRGMNPGCS"
     gene            complement(8112..8876)
                     /locus_tag="VHX39_22690"
     CDS             complement(8112..8876)
                     /locus_tag="VHX39_22690"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3993990.1"
                     /translation="MRYSDKVALITAAANGIGRATCDIIAREGGIVVAVDNHQERLDA
                     AIDAMTKAGGRAHGRLCDALDQSQVDAVVASVVKEFGRIDVLVNAVGGSTIISRPAAK
                     VDELTLDEWQRLINFNLNGTFLFLHAVVPVMKAQKSGKIVNLASIAGRGLSSSSSVAY
                     CAAKGGIIALTRKLSLELGEFNINVNAIAPSLTLTERIRPHWNQRSPEAQSAEIDRTP
                     LKRVAEAQDQAKVIGFLASSDADFVTGLTIDVTGGL"
     gene            complement(8892..9929)
                     /locus_tag="VHX39_22695"
     CDS             complement(8892..9929)
                     /locus_tag="VHX39_22695"
                     /inference="COORDINATES: protein motif:HMM:TIGR03559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HEX3993991.1"
                     /translation="MKLGLSIGYSKAHLDLPVALVQRAEQLGYDSVWSAEAYGSDAVT
                     PLAYLAAVTKRIRLGTGIMQLAARTPANAAMCAGTVDALAGGGRFIAGLGVSGPQIVE
                     GWYGEPWGRPYYRIRDYVAIMRKIFAREEPVTHEGREISLPYKGEGAMGVGKPLKSIL
                     HMNPHIPIYLATGNESTVKLTAEIADGWVPMGFFPGSMDVYRPWLEAGFRRAGNGKTL
                     KDLEIQASVHVEVNDDVKGALAKLKPEVALYVGGMGHRDKNFHKDIMVRYGFGDAANR
                     IQELYLAHRKEEATAAVPDEWVDLKSLVGPPARIKERFRAWEDSGATGVTVRSRQPEA
                     IEIMAEAARLN"
     gene            complement(9937..>10254)
                     /locus_tag="VHX39_22700"
     CDS             complement(9937..>10254)
                     /locus_tag="VHX39_22700"
                     /inference="COORDINATES: protein motif:HMM:NF019590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HEX3993992.1"
                     /translation="KEGGFYELRMYRTNPGRAPGWAAAFRDIMPVREKYSRNIGIWTG
                     EAPQPNEVWHMWNYQDTNERTKARGALFKDPEWLSFLEKNSGAVVEMNNVMLIPTDYS
                     GLK"
BASE COUNT         2139 a         3240 c         2891 g         1984 t
ORIGIN      
        1 cgggaagtag cggttccgga ccaccgtcgt cgattgtcac ggcggtaacc acccaatcct
       61 ctggactggt gaccagcatc acctggaata tggtgccatc cgggagttac gctcacggtt
      121 ccggggtgat cggcatcaac gcccatgtga acccggcgaa tgcgacaatt cagttcggct
      181 tctcgacgtc cacaaacacg ccgccaacgg cctggttaac tgcgacgtac gtgaatacgg
      241 atctttgggg tcaatatatg ccaactccgg caacggccgg aacgtggtac gcctgggccg
      301 aaggtactga tggcagcgcc gcaagtgtct acccaacacc attcacggta acctgacgac
      361 cggattaaag cgccgcacgc caacgcgcag ttcacctgcc ctgacgcacc tcgaactcgt
      421 ccgccacggt caggacctcg cgggtccgcg tcacacgacc cgaccaacat cgatcgaatt
      481 ccgcaataag catctttatt gcaagccccg acatgaccgc ttcaagacga tcatgcgact
      541 cgaagcggta atacgcacaa tggatggacg gatcagtcga actccatccc cgccacgcag
      601 tgtttgccga aaatgccttg acggcatccg gcaaatgctc gttgcgatac cacgcatcga
      661 aggcagcgcg gtcgccggaa tcagcgacga ctgcgcgcac aacgagccag gcaccggaca
      721 ggatcagccg gtcttcgcgt gtttgcccga cacttgcggc gtcggtcctt cctgtccctt
      781 ctgctgacga tcaagacgcg tctcacgcaa ccaggtccgt ttcagttcgt ccctgatgtt
      841 gaaacggagc cgacccaggc cctgagtttc cagttcgacg acgtcgccat ccatgaagct
      901 ggacaggccg cggtgattgg ttccggtcgc caagatatcg cctggctcca gcgtgtggat
      961 cgaactcgcc cattcaatgc aacgagcgat gttgtgggcc atgtcgtcgg tattgaagtc
     1021 ctgtttcaac tcgccattga cccaaagctt gattggcaac ttttgcggat cggcgatttc
     1081 gtccttggtg acgagatacg gcccaatcgg agcgaacgta tctcgggact tcatctgaaa
     1141 gaacacattg ccgggcggcg gcaggccgcg ggccgatccg tcgatgaagt tgatataccc
     1201 gaagatgtaa tccattgccc gagacgcagg aacattcgtg gcccgtttgc caatgaccag
     1261 cgccatttcc gcctcgccct caaaaatcgt tgcggggacg tcaggcaaca ccatggtgtc
     1321 attcggaccg atgatcgatg ttggtgcttt gtggaaggcg ttgattggcg ccggcttcgc
     1381 caacgtcccg ttctccatgt agttcaccgc catgcaaaca atgttgcccg gcttcggcag
     1441 cggcgggcga acgcgcacgc ttgagagcgc gaccccggcc ccggctgacg cggcctcgag
     1501 ctttccccga tatgcgtcaa atcgggcaat cagtccgctg atcaggtctc ctgggccagc
     1561 atgtggaata tcctggacta ccgccgacac atcgacgatc gaatcccctt tgacgacacc
     1621 gagtttgaaa tcgtcgaaaa acgccagctt catcggtttc ctcccaacaa gggttgtatg
     1681 aaccctaccc taccctgctc tcaggtctgc cagcaacggg agggcttccg tagcacccgt
     1741 ccggtcggtc accgcacccc gtcgcggccg agtcggttat gccgcacata ccgcagcggc
     1801 gaaatctgtc gggaagaccg caaatgtccg atgcggaatg gaccggaatt gctggctgag
     1861 tcctccgcgg cgcaagcaat cccttcacgg gcggcggtcc gaacagccgg cctcgtcaca
     1921 agcgccggac accgtcacta cctgcccaat caaaccgccg cttccttgca tccggcgagg
     1981 cagattggga actcgctggc gaacgcatca tctcggcttc gggcggtccg aacgtcgcat
     2041 tgttgggcat aacgaacctc ccgtcccgcg gacggaacaa taccgcatgc caacagacca
     2101 tggcgaaatg gacagtgctg accgacatcc gtcatcaaat tggtcaaagg gtaattccat
     2161 gccactaacg ttaacgttga cgacaccact taccactgaa gagaaattga tactaagcgg
     2221 cattgcgact gcggaaggta cttcgagcgg gggtacactc acgacgccaa ccattcccgt
     2281 ggtgaacaac ttcccgctga cagcagccgg actgcctgac attcttaacg ccaccaagcc
     2341 aagccccgaa aactccgaaa ttctcatcgt gagcggcaaa gtcactggtg cgccatatct
     2401 ggtcgataat accggcgggg tatggacgtt aaccatcaac gcggctggcc tcggtgtggc
     2461 gttcattgat agcacgcaga ttggaggcgg cggagccggg caagggattg accagctgat
     2521 cgtgcggacc ggtctggtct tctgcgtcct cgtcggtggc caggtgcaat tgtggaacca
     2581 atcgcaaggg tcgctctaca acgcaacgct ccccgcagca ttcaccaccc cagcgactgc
     2641 caccacgccg gctttgccag ccctgccggc cctgccagcg actccggcag tcatgggtgg
     2701 cacaagcggt acagttatca actgcggcgc cgggcaaaca cttgcaacca ttacggcagg
     2761 cataaatgca gcagcggcag gcgataaggt gcaggtagcc aaggccacat attacgaagc
     2821 actgcccgag ttgtgcgttc caatcatgct cgatctgggc ggttcaacac tgagtggcac
     2881 cggcttgaca gcgagcctgg caggcggagg gcttgggctc atcgtcccag atgcacccgg
     2941 ctgcattgtg cagaatggca caataaccga tgtcgccatg gatcagacat ctggccagat
     3001 gaccgccgca gttcgtccga acggcggatg cacctatctc gaaacaaata acctgacgtg
     3061 caccgccaac caaaatggct tcgcatccgg cggatatcca attgtttgga tcgacaacgg
     3121 ttcgacgttg cacaacaacg gccttggtga cgcagccggc tcgacacaca atgcttactt
     3181 ttccacagca tcgggtgctc agacgacact caacaatacg acctcggtca ttgatccgac
     3241 cgcatcggga ccgcttggcc tgctccaggg tcatgccata aaatgtcgcc aggaacacgg
     3301 tattattgtg aacggcggca cgttcgcagc gccactggca acgatctttg atatcccgaa
     3361 cggatcgacg accccggtgc aactgaacgg tgctaccctc aacaagaccg cgaccgacgg
     3421 caatcatgcc atcctgggtt acggcatgga aagtcaaacg aatggacttg acggcgtgat
     3481 catcaacggc ggcacaatca atgcgtgctg cgcctcgccg ctttggcagg gaaccggcgg
     3541 gacgatcacg attgacgcaa acgtcgtact gaccggaaac ccgattagcg ccgctggtgt
     3601 tacggtatca gcctaaaggt cgcacccgcg cgccgttcgc atgaccctct tccaccagtg
     3661 tcgagacgcg gacagtgcgc ggcctcacat cccaggaggt aacagagctt ttgtggcgtt
     3721 tgattggcac cgtatcagac gacgcggcaa catagacgac ggataagcgg tttccgctca
     3781 gcataacttc gcaaacgggc aaccttcggg ttgcccgctt tttttattcc ggcatgcagg
     3841 ttcgtcccaa cataggttgc atgaacgctg ccctaacccg cgcgaaggtc tgccagcaac
     3901 gggagagcgt ctgttgcaaa ccattcgatc tgccgttgcc gctcctcgta tggaccgagc
     3961 aggtcaagca caacatgccg aacgccggcg gcatgaaatt cgcggattcg ctcaacaacc
     4021 tgctcaggcg ttcccagtgc acaatatctc gccgccggtt tgcgaaaatc cattgcatag
     4081 cgaacgctca gagtttccgt ggcccggtcc agtgccgcct cgtatgtatt atcaagccgc
     4141 gtgaacaaca aatgaccggt gccgaagcgt tccgggcttc ggttcgcatc gcttgcagca
     4201 gcggcaattg tttccagtgc ggcggcatac attgcaggcg taatcacata cgccaaatac
     4261 ccgtcaccca gccgcccaat tcgccgcagt gccgcttcct tgcgtccggc gaaccagatg
     4321 ggcggcccgc ccggctgccg cggcggagga cgcatcggca catcgtcgaa tggtccgtaa
     4381 aaccggccat ggtggctgac aggttcgccg ctgaaaaatt tccgtagtac ctgaacccct
     4441 tcggccaggc gggcgccgcg ctcactgtgc ggcacatcgc aggcggcata ctctttcgga
     4501 aactcgccac ccacgccaac gcccaggatc aggcggcctt cagtgagatg gtcgagcgtc
     4561 gtcacctgtt ttgcgaccgg cgtaggatgc cgcaacggaa gcaacagcac gccggttccg
     4621 agagtcagcc ggcgactaac gacggcagcc tgagccaatt gcaacatcgg atcgaagatc
     4681 ggcacggcga aggaaatgtg atcgccaacc caaagcgagt cgtaaccgca ccgatcaacc
     4741 aaattcacga acgccgccaa atcgtcgatg gtgggtaacc aggggccggt cgccggttcg
     4801 gttcgccggt gaatggtctg gatgccgatc cgcagccgat cgtccaactt caggtgcatc
     4861 gcatcctcct ccaccaagcg ccgcgccagt gttgcaggca acgcccggca acgccaaggt
     4921 cagcaaaacc accccaccgg aggaccacgt gcccgacctg atcgagaccg ttgaaaacgg
     4981 cattgccatt ctgacattga accggcctga gcggctgaat gcgctctcca tggacatccg
     5041 taacggcctt ctcgaagcgc tcgagcgact gggccatgac aatagcgtgg ggtgtatcat
     5101 cctcaccggg gcaggccggg cgttctgcgc cggaggcgac gtcaaatcga tgggcgaacg
     5161 cgccgccgca gggttcgaac agcgggctgc aggcatccaa ttctccaacc gtatcccgcg
     5221 tctcatgcgg acccttccca agaccgtcat cgccatggtg aacggggttg cggtcggcgc
     5281 cggcctcagt atggcactgg cctgcgacct tcgtgttgcg gcacgatcgg cccgtttcgg
     5341 gaccggcttc ctgaagattg gtctgtccgg agattggggc ggcacctgga ccctgacccg
     5401 gctggtgggc accgcgaagg cgcgcgaact ctatctgctc ggcgatatga tcagcgcgga
     5461 cgaggcgctt atccatggca tggtgaaccg cgtagtcgat gatgccgacc tgctgagtac
     5521 gacgatggcg atggcgcgcc gtatcgcgga tctgcctcag atcgccgtcg gctacgcaaa
     5581 acgcaacctg aacgcggccg agaccgggga ttttcagacg gttctggaca tggaggcgtt
     5641 caaccaggcg cggtgctcac aaacggaaga tcaccgcgag gcggtcaagg ccttcactga
     5701 aaagcgcaga ccggttttcc acggccgctg aactcgatcg ccgacaatcg tggatgcaac
     5761 gcgtcgctgc ggctttgctg tgccgcagcg atctcctcag ggacagattg taatgacggc
     5821 gcgccgcaag tgctcaggcc ggccgtttcc agcccaacca gtcgatcaca ccctggccca
     5881 tgaccaactc cagatcgcgg ccctttagcc acggcagttc ttcggtgaac atcgtcacac
     5941 attggcgata actgcacggc attcgcgtga tgtcggttcc ccagaagaat cgtcgaggcc
     6001 cgaacgcatc gtaaatccgg tgcaggccgt cgtggatgtt cttaaacgga taagccgccg
     6061 aagagtggct tggcgcaccg gtcgccttga ccgccacatt tggatactgc gccagcgcca
     6121 cgagcggcgc caaattcgca aacgcggcat cgtccttcgc tgaccggatc acacccaggt
     6181 gatcaatgat gagtttcagc tgcggatgcc gctcggcaat ctggccgaaa aacggcagga
     6241 atcgccacgc catcgtggca atcggcgtgc cagctttctc cgccgccggc cacagccaat
     6301 ccatcgtgcc gtcttcatgc caggtctcct gcccttcccg cgtcaatgac caacgcaagc
     6361 ccagcatgcc gggctgttcc ttccaggtct cgatccgctg gcgttgcgag ggatcgttca
     6421 gcgcaaacca acccagactg cagaactttt cgggataatt ttttgcggcc tcgattgcca
     6481 tttcgttgga gccggcgtcc caacttggcg gatgcagcac cgctccgtcc acgcccgcct
     6541 cgtccatttc cttgatcagt tcctccgccg tgaagaccga tgtctgccgg tgatgagcac
     6601 tgggtttacc actcccccag atatgaacct gcgcgtcgat gatcagcatg gccgttctct
     6661 ccgtccgttg ccggcgatgc tgagccgtca ccacggtcca cgcaacccgc actcagccct
     6721 ggacgcgacc aacgacggca ggcaaacagc ttcagttcat acgatgctgg agatctgctg
     6781 tgctcgaccg cataatcctg accaacgacg acggcatcga tgcccccggc atggcagtgc
     6841 tggaggaaat cgcagtccag atcgccaagg aagtgtgggt cgtcgcaccg gagcacgacc
     6901 aaagcggtca atcccacgcc atcagcctgc atcacgcgat ccgggtctct gagcgaggcg
     6961 tccgtcgctt tggcgtcacc ggcacgccag gcgactgcgc ggcgatgggc atttgccatc
     7021 tgatgaagga tgcgccgccg cagctcatgc tgtccggggt caatcgcggc gtaaaccttg
     7081 gcatcgagac cgtgttctcc ggcactgtcg gcggcgcaat gaccgcgatg atgctgggag
     7141 tgccggcaat tgcactgagc caggcgttta ccgatcgccg caacgtgccg tgggataccg
     7201 cacgcacgct tggagcgcgg acaatccaat acctggtcga aaccggttgg gccaaaggcg
     7261 cctgcctcaa cgtcaacttc ccgcccattc cggctgacga ggtcggcccg atcgctcttg
     7321 ccaggcaagg cgagggactg atcgccggaa tggtcgtgga aaccagggtc gatccgcggg
     7381 ggctgtccta tcactggctg aacttccaac gcagcgatcg ccagcagagt ccgggaaccg
     7441 actacagcgc gatgcgagca ggacggatcg tcgtcacacc attgcgctac gaccgcaccg
     7501 atgaggatgc gtttaacgaa ctcgcccaga aactgccaaa gttcgaaggc tgacgactaa
     7561 cgggcaaacg acgacaccgc gcgtgcccaa agcgcagcgg tttcgccgcg ccgcgccgga
     7621 tgtgcattcc taaccccgcc ttaagccatt cccggcttgt gggctgacga ctggcgggca
     7681 agcgaacggc caggctgttt cgttacgaac agccagggtt catgccgcga caagtggctt
     7741 cgaagtcgtc cgagataaac ggcggacgtt tatacaggcc cttcatccag gcagccaaca
     7801 tgcacagttc ctccagctga accacctcat ccagagtact cggcggaaag cccagactga
     7861 agctctgcgc tacgattgcg attatcgcct caagttgttc gatcaccaaa ccgcagtccg
     7921 tctccaactt cgcggttcgc gtcaggattg cctcgtcgat ctcatattcg tcacggatca
     7981 tcttcacgat ccaacgaaac atgttcatcc agttcttgac gtcgtccgtt ggtggaggca
     8041 tcggcgcgat cacgcccaaa agttctggcg ttgccttatc gctgaaaggt aatgaaacgg
     8101 ttaacggccg gtcacaagcc gccggttacg tctatcgtca gaccagtcac gaagtcggca
     8161 tcgctcgagg ccaggaagcc aatgaccttc gcctggtcct gggcttcagc cactcgcttc
     8221 aacggcgtac ggtcgatttc cgccgattgc gcctcgggtg agcgctggtt ccaatgcgga
     8281 cggattcgct cggtcaatgt gagactgggt gcaatggcgt tcacgttgat gttgaactcg
     8341 cccagttcga gggacagttt ccgggtcaac gcgatgatgc cacccttggc cgcgcagtag
     8401 gcaactgaag acgacgaact caggcctctt ccggcgatag aggcgaggtt gacgatcttg
     8461 ccactcttct gcgccttcat gaccggcacg accgcgtgca gaaacaagaa agtaccattc
     8521 aggttgaagt taatcagacg ctgccactcg tcgagcgtca gttcatccac cttcgccgct
     8581 ggtcgcgaga taattgtgct gccaccgacc gcgttcacca gaacatcgat ccggccaaat
     8641 tcctttacca cactggctac gacggcatcg acctgcgatt gatcgagcgc atcgcagagc
     8701 cggccatgcg ctcgccctcc ggctttggtc atggcatcga ttgccgcatc cagccgttcc
     8761 tggtgattgt cgaccgcgac gacgataccg ccctcgcgcg cgatgatgtc gcaggtcgcg
     8821 cggccgatcc cgttggccgc tgcagtgatc agcgcgactt tgtcgctgta tcgcatcgtt
     8881 tatccccttg ttcagtttag ccgcgctgcc tcggccataa tctcgattgc ttcgggttgg
     8941 cgggagcgga cggtcacacc ggtggcgcca ctgtcttccc atgcccggaa acgctccttg
     9001 attcgagccg gcggtccgac cagcgacttc aaatccaccc attcatcggg tacggcagcg
     9061 gtcgcctctt ctttgcggtg cgcgaggtaa agttcctgaa tgcgattggc ggcatcgccg
     9121 aacccgtaac gaaccatgat gtccttatgg aaattcttat cgcgatgacc catgccgcca
     9181 acgtaaagcg cgacttccgg cttgagtttc gccagcgcgc ctttgacgtc atcgttgact
     9241 tcaacatgaa ccgaggcctg gatttcaaga tccttcaggg tcttgccgtt tccggcgcgg
     9301 cggaatcctg cttccagcca cggccggtaa acatccatcg agcccgggaa gaatcccatc
     9361 ggcacccaac catcggcgat ctcagcggtt agtttcaccg tcgattcgtt gccggtcgcc
     9421 agataaattg gaatgtgcgg attcatgtgc agaatcgatt tcagcggctt gccgacaccc
     9481 attgcgccct cgcctttata aggcagactg atctcccgtc cctcatgcgt aacgggttct
     9541 tcccgggcga agatcttacg catgatagcg acataatccc ggatccgata atacggccgg
     9601 ccccagggtt caccgtacca gccctcaacg atctgcggac cggacacgcc caggccagca
     9661 atgaaacggc caccgccggc gagggcatcg acggtgccgg cacacatcgc cgcgttggcc
     9721 ggcgtccgcg cagcaagctg catgatgccg gtacccagcc ggattcgctt cgttacagcg
     9781 gcaagatagg cgagaggcgt tacggcatcg gaaccgtatg cctcagcgct ccagacggaa
     9841 tcgtagccaa gttgctcggc ccgttgcacg agcgccaccg gaaggtcgag gtgcgccttg
     9901 gagtacccga tcgacaggcc aagtttcatg acacgcctat ttcaagccgg agtaatcggt
     9961 tgggatcagc atcacgttgt tcatctcgac caccgctccg ctgttctttt ccagaaagga
    10021 cagccattcc ggatccttga acaaggcacc ccgagccttc gtgcgttcgt tggtgtcctg
    10081 ataattccac atatgccaaa cttcgttcgg ctgcggtgcc tcgccggtcc agatcccgat
    10141 atttcgagaa tatttttccc gcaccggcat gatgtcgcgg aatgcggcag cccaccctgg
    10201 ggcacgcccg gggttggtgc ggtacatgcg cagttcgtag aagccgcctt cttt
//
LOCUS       DATAVD010001190         4130 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3652700, whole genome shotgun sequence.
ACCESSION   DATAVD010001190 DATAVD010000000
VERSION     DATAVD010001190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4130
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3652700"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..193)
                     /locus_tag="VHX39_22705"
     CDS             complement(<1..193)
                     /locus_tag="VHX39_22705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993993.1"
                     /translation="MNALHKPASGTLCRFGPFALRTRPWRIAIEAQSATHLLFSVIHW
                     RRRRRGLWLLPRQAHSLALI"
     gene            323..811
                     /locus_tag="VHX39_22710"
     CDS             323..811
                     /locus_tag="VHX39_22710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3993994.1"
                     /translation="MAAETAGRERAERALHEAQAAVQALQTKIGHNDLAKNEATAASK
                     RHLEEIVALKEELAAGAERLLEAETRASDIEEDMRVMRAELTEERRARKLAERLLREA
                     TEDAARIVPFEIAPPPRPHDPVERIPARRGRPPTVHAEPEVEPEPVKWWLLPAKTATK
                     RR"
     gene            complement(828..1274)
                     /locus_tag="VHX39_22715"
     CDS             complement(828..1274)
                     /locus_tag="VHX39_22715"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HEX3993995.1"
                     /translation="MVEIGFYHLTRTALPEALARLLDRTLRAGQRALVLCPDEARLKA
                     LDSALWACADPVWLPHGTAADGDPDLQPVWLSTVPEPANGALFLFLVDGADSDRSRTF
                     SRVFDLFDGNDTEKVAAARDRWRAGKENGHALTYWKQGPRGWEKAG"
     gene            complement(1284..2765)
                     /locus_tag="VHX39_22720"
     CDS             complement(1284..2765)
                     /locus_tag="VHX39_22720"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEX3993996.1"
                     /translation="MLDIAFVRPSLPKSGALVLLVHEGEKPSGLWQHVDDSTDGAILR
                     ALEVAEFKGGQGKTVTILAPGAGLSRVVAVGLGKPAELTGRGLNEAGGTAVATLSRDG
                     TAVIATGTLTPEQAADVALGATLKAYRFDRYRTKEKPEDKPKLTKLSVATSDAAKART
                     AWDRNKAVAEGVFLTRDLVSEPPNVLNPAEMAERCKKLTSLGLKVDVLGPKEMQKLGF
                     GALLGVSQGSVNEPRMVVMQWSGGNGAKGKAKERPVAFVGKGVTFDTGGISIKPAGGM
                     EDMKWDMAGAGTVIGLMAALAGRKAKVDAVGLVGLVENMPSGSAQRPGDVVKSYSGQT
                     IEVINTDAEGRLVLADVLWYAQEKFDPKFMIDLATLTGAIIIGLGHEHAGLFSNDDGL
                     CQKLTEAGLAIGEKLWRMPLADEYDKQIRSEIADMKNIGGRPAGSITAAQFIQRFVNK
                     KPWAHLDIAGMAWSTKDTPCTPKGATAFGVRLLDRLVADHYEG"
     gene            2858..3829
                     /locus_tag="VHX39_22725"
     CDS             2858..3829
                     /locus_tag="VHX39_22725"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HEX3993997.1"
                     /translation="MTEILPATPDGIARAAELLRGGALVSFGTETVYGLGGDATNAAA
                     VAAIFAAKGRPRFNPLIAHYPDAQAAFEDVLPNELARSLARAFWPGPLTLVLPRRPEC
                     RVALITGAGLDTLAVRVPRNTHALALLRAVSRPVAGPSANRSGQVSPTTAAHVLDGLR
                     GRIAAVLDSGPCDVGVESTVLDVSGARPILLRPGGVTTEALEAVIGPIERGLAVAATQ
                     ALRSPGQLVSHYAPTLPVRMNATTVCNDEALLAFGEPCNGAGLIVQLTETGDVVAAAA
                     RLFDGLRSLDAEGQRRGLRGIAAMPVPEAGLGRAINDRLRRAAAPRG"
     gene            3888..>4130
                     /locus_tag="VHX39_22730"
     CDS             3888..>4130
                     /locus_tag="VHX39_22730"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3993998.1"
                     /translation="MRLQGKVAIISGGAHGMGECEARLFAQEGAAVVIADVINEGEAV
                     AADISAGQAWARFIRCDVTSETDWQHVISETIREFGR"
BASE COUNT          764 a         1266 c         1294 g          806 t
ORIGIN      
        1 ggatcagggc caacgaatga gcctgccgcg ggagcaacca caatcccctt cgacggcgcc
       61 gccaatggat gacgctgaac agcaaatgcg tcgcgctctg ggcctctatg gcgatgcgcc
      121 aaggccgcgt cctgagagcg aacggtccga accggcacaa cgtgccggag gcgggtttat
      181 gcagggcgtt catcgtcggc gcttcgtgca agatggcgaa gtcccggtga cggtggtgcg
      241 gcgcgacgtt cctgatgccg cccatcctgg caccgggcag gccgctccga cctccagccg
      301 cctccagcga gttgaggctg cgttggcagc cgaaaccgcc gggcgcgaac gtgcggagcg
      361 ggcgctccac gaggcccaag cggcggtgca ggcattgcaa accaagatcg gccacaatga
      421 tctggcgaaa aatgaggcca ccgcggcgag caaacgtcac ctcgaagaga ttgttgcatt
      481 gaaagaagag ttggctgcgg gtgccgaacg tctgctggag gcggagacac gtgccagcga
      541 tatcgaggaa gatatgcgcg ttatgcgcgc cgaactgacc gaggaacgtc gcgcgcggaa
      601 actggctgag cggctcttgc gagaagcgac ggaagacgcc gcgcggatcg ttccttttga
      661 gattgcgccc ccgccgcggc ctcacgaccc ggtggagcgc attccggcgc gccgtggccg
      721 gccacccaca gttcatgcag aaccggaagt tgagccggag ccggtcaagt ggtggctact
      781 ccccgcgaag acggcgacaa agcggcggta gatttaaccc cccgacgtca tcctgctttt
      841 tcccagccgc gcggaccttg tttccaatag gtcaatgcat gaccgttttc cttgcctgct
      901 cgccacctgt cgcgggccgc ggcgactttt tccgtgtcat ttccgtcgaa caagtcgaaa
      961 acccgactga atgtgcgact gcggtcggaa tccgctccat ccaccaggaa caagaatagc
     1021 gcaccattgg cgggctccgg cacggtgctc agccaaacgg gctgcaaatc gggatcacca
     1081 tctgccgccg tgccatgcgg caaccagacc ggatcggcgc aggcccacag cgcgctgtcg
     1141 agagccttta gccgcgcctc gtccggacaa agtaccaggg cacgctggcc ggccctcaga
     1201 gtgcggtcca gcagtcgcgc caaagcctca ggcaaagcag tccgggtcag atgataaaac
     1261 ccaatctcga ccacgctgcg gcgctatcct tcgtaatgat ccgccaccag ccgatccagc
     1321 agacgcacac cgaacgctgt cgcgccttta ggcgtgcatg gcgtgtcctt ggtgctccag
     1381 gccataccgg cgatgtccag atgcgcccac ggctttttgt tcacaaaacg ctggatgaac
     1441 tgggctgcgg taattgaacc cgccggccga ccgccgatgt tcttcatgtc ggcaatttca
     1501 gaacggatct gcttgtcgta ttcgtcggcc aacggcatgc gccagagttt ctcgccgatt
     1561 gccaaaccgg cctcggtcaa cttctgacaa aggccgtcgt cgttactgaa caatcccgcg
     1621 tgttcatgcc cgaggccaat aatgattgcg ccggtcaacg tcgccaggtc gatcatgaat
     1681 ttcggatcga acttctcctg agcgtaccag agcacatctg ccagtacaag gcgtccttcc
     1741 gcgtcggtat tgatgacctc tatcgtttgt cccgagtaac tttttaccac gtcacccgga
     1801 cgttgcgcgc tgccggacgg catgttttca acaagtccga ccagcccaac cgcatcgacc
     1861 tttgccttgc gtccggccag tgctgccatc aaaccgatga cagtcccggc acccgccatg
     1921 tcccacttca tgtcctccat accgccggca ggtttgatac tgatgccgcc ggtgtcgaag
     1981 gtcacaccct tgccgacgaa cgccaccggc ctttccttgg ccttgccttt ggcgccgttt
     2041 ccaccactcc attgcatcac gaccatgcgt ggctcgttca cgctgccttg cgagacgcca
     2101 agcaaggcgc cgaagccgag cttctgcatt tccttcggac ccagcacgtc aaccttcagg
     2161 ccgagtgatg tcagtttctt gcaacgttcc gccatttccg ccggattgag gacgtttggc
     2221 ggctcgctga ccagatcccg ggtcaggaac acgccttcag ccacggcctt gttgcgatcc
     2281 caggctgtgc gggccttggc agcatcgctg gtggcgacag agagtttcgt cagcttcggt
     2341 ttatcttccg gtttttcctt ggtacgataa cgatcgaagc gataggcctt caaggtagcc
     2401 cccagggcca catcggctgc ctgctccggc gtgagtgtgc cggtggcaat aacagccgtg
     2461 ccgtcccgcg agagcgtcgc gacggcagtc ccgccagctt cgttcagtcc gcgaccggtg
     2521 agttccgcag gtttgcccag tccgacagcg accacgcgtg agagaccggc acctggagcg
     2581 aggattgtga cggtcttgcc ctggccgccc ttgaactcgg cgacttccag ggcccgcaat
     2641 attgcgccat cggttgagtc gtcaacatgt tgccagagtc cggacggctt ctcgccttcg
     2701 tggacgagca gcaccagcgc accggatttc ggcaaggacg gcctgacgaa agcgatgtcg
     2761 agcatgattt ttggtttccc cggatcggtt gcggcggcgg acattagacc gatggcgggg
     2821 gctttgccat ggtctttgag gcggctattg cacgcccatg acagagattc tgccggccac
     2881 ccctgacggc attgcgcgcg cggcggaatt gttgcgcggt ggtgcgctgg tttcattcgg
     2941 aaccgaaacg gtctatggac ttggcggtga cgcgaccaac gctgccgcgg tggcagcgat
     3001 attcgccgcg aaaggccggc ccagatttaa tccgttgatt gctcattatc cggacgccca
     3061 ggcggcgttt gaggatgtgc ttccaaacga actcgcgcgt tcgcttgcgc gggctttctg
     3121 gcctggacct ttgacgttgg tgttgcccag gagaccggag tgtcgagtgg cgctgattac
     3181 cggggccggt ctggatacgc tggcggtacg agtgccgagg aacactcatg cgcttgctct
     3241 attgcgcgca gtgagccggc cggtcgccgg accctcggcc aatcgttcag gacaggtcag
     3301 tccaaccacg gcagcgcatg tgctggatgg gttgcgtggc cggatcgcag cggtgctcga
     3361 cagtggccct tgcgacgttg gcgttgagtc cacggtgctt gatgtatccg gagcgcggcc
     3421 gattttgctg cggccaggcg gcgtgaccac ggaggcattg gaggcagtca tcggaccaat
     3481 cgaacgcggt ctggcagtcg ccgcgacaca ggcgttgcga tcgcccggcc agttggtgtc
     3541 gcactacgca ccaacgttgc cggttcggat gaatgcgacc acggtctgca acgatgaagc
     3601 gttgctggcg tttggcgaac cttgcaacgg tgcgggcttg atcgttcaat tgaccgaaac
     3661 tggtgatgtt gttgcggcag cggcgcgatt gttcgacgga ttgcgatcgc tggatgcgga
     3721 gggtcagcgt cgcggtttgc gcggcattgc tgcgatgccc gtccccgagg ccggccttgg
     3781 gcgggcgatc aacgaccgtt tgcgtcgcgc tgccgctccg cgcggttgag gttgcacgag
     3841 ccgcagggca ggacaaagat cagagcacaa ccgaaccgga ggaaaccatg cgtctgcaag
     3901 gcaaagtcgc catcatcagc ggtggcgcac atgggatggg agaatgcgaa gcgcgcttat
     3961 tcgcgcagga gggcgctgcg gtagtgattg ccgacgtgat caacgaaggt gaggcagtgg
     4021 cggctgatat cagcgctggt caggcatggg cgcgtttcat tcgctgcgac gttacatcgg
     4081 agaccgactg gcagcatgtc atttccgaaa caatacgaga atttggccgt
//
LOCUS       DATAVD010001191         4225 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2906554, whole genome shotgun sequence.
ACCESSION   DATAVD010001191 DATAVD010000000
VERSION     DATAVD010001191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4225
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2906554"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..728)
                     /locus_tag="VHX39_22735"
     CDS             complement(<1..728)
                     /locus_tag="VHX39_22735"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX3993999.1"
                     /translation="MTFPHIALLVAGLLILIGFGFSGLLVSRAQSLEKRFRGRCESVL
                     QPHIRTQPIDIRLFTNSVGEQTSAKVWLASWFGVDLERPDICPVPWSIIVCGALIAAW
                     IESSAAASLLGPYVWFGFPVTSIIVSRTVFDIFRSKRRIKLLLQFPDALMMIVRSVRV
                     GVPVTQAIYIIAREQPQPTAAEFARLASQLSIGEPLDTAILEMARHADLPEYRFFATA
                     LTLQSKAGGALSGTLENLADMIRRR"
     gene            complement(725..2074)
                     /locus_tag="VHX39_22740"
     CDS             complement(725..2074)
                     /locus_tag="VHX39_22740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HEX3994000.1"
                     /translation="MSASVLPQFGKRMGDSQPIIVLAPEASAEAGPSAQAINEIRSLC
                     LSRLEPGAVAGMSSERLAGDMERLISEIATQNRIQLNAREQRGLATELVHDIVGLGPL
                     EPLLGDDTISDIMVNGPDRIFIERRGKTVRSSVRFRDRQHLAGICQRIAAAVGRRVDE
                     SSPMVDARLADGSRVNIVFQPLALDGPYVSIRKFGKKPIDLAKLVEFGALTPTVAKAL
                     EIAARCRLNVIISGGTGSGKTTMMNALSRFIALDERVLTVEDAAELQLQQPHVVRLET
                     RPNSLEGKGEVTQRELVRNALRMRPDRIIIGEVRGGEAFDMLQAMNTGHDGSMSTIHA
                     NNTRDALVRIENMVQMGHMGLPSQAIRTQIVGAVDLIIQVARQRDGGRRVTQVSEICG
                     MEGDVIAINDLFALELQGQDRDGRLHGIYHRSRVPPSFGPRLTYFGLEKAWQEMMAE"
     gene            complement(2071..3336)
                     /locus_tag="VHX39_22745"
     CDS             complement(2071..3336)
                     /locus_tag="VHX39_22745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994001.1"
                     /translation="MDSTAEIDHRAMDMNGAGNPLRHDRRHLIAFVADTGSEQVLRAS
                     LSDMLPEPPDIRRGGIRAAHAAMLKTTSPRILIVDISGEEHALKALADLATVVEPDVC
                     VLVIGDHEGMEFYREVTRGLGAADYLPKPLARDLVSRHFGGFVLGRAPSSSSSMGGRV
                     LAVTGVRGGCGASSIATNLAWHFGVTLRHHTVLVDPDLYRGNAAFLLNLPPGDGLVAA
                     LESPLRIDTLLAERAAQPAAERLHVLAGESPVGVLPAYADDAAETLINALRKRYNFVV
                     LDVPFAPVPLYRDLIGLAHQQVLVMEPSLVSLRDVLRFNTVSSSDGPAPLIVLNRLGI
                     PGGLTRRQVEEGLKRKVDIVLPDLPRQLRGAANLGEPAVVAIAAYRKVISELGRAVAG
                     AGLLDSLAASAPPEPAAKRKKWFRARKTK"
     gene            complement(3329..3649)
                     /locus_tag="VHX39_22750"
     CDS             complement(3329..3649)
                     /locus_tag="VHX39_22750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994002.1"
                     /translation="MRLSPVIPLLFVVSVALTACEHNTDLIAKLNAEPLGHTNESNIA
                     AMVANPADLIRGHGGGPVDDAVSVQPIDRFKMDRLKALPDPGGSSGGAASGGGASGGG
                     ASGG"
     gene            complement(3658..>4225)
                     /locus_tag="VHX39_22755"
     CDS             complement(3658..>4225)
                     /locus_tag="VHX39_22755"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II and III secretion system protein family
                     protein"
                     /protein_id="HEX3994003.1"
                     /translation="GGQYPIPVAGGALGQVTVSYKNYGVSLSFLPTMFSDGRISIHVA
                     PEVSELSAQNAVTVATSGSNLVVPSLTVRRAETTVELGSGQTFAIAGLLQDTMSGNRS
                     ALPYLGDLPILGPAFRDDQFQRGETEIVILVTPYVVNPVNDPNALRIPTNGPITSDLD
                     RMLYMRTSSDTGHQTLAPTPGVAGFIVQ"
BASE COUNT          794 a         1357 c         1329 g          745 t
ORIGIN      
        1 cgccggcgga tcatatcggc caggttttcc agcgtgccgc tcagcgcgcc gcccgccttg
       61 ctttgcaggg tcaacgccgt ggcgaagaaa cgatactcag gcagatcggc atggcgcgcc
      121 atctccagga tggcggtgtc cagtggctcc ccgatcgaaa gctggctcgc caggcgcgcg
      181 aactcggctg ctgtcggctg cggttgttca cgcgcaatga tgtagattgc ctgggtcacc
      241 ggcaccccga cgcgaaccga ccggacgatc atcatcaggg catcgggaaa ctgcagcagc
      301 agcttgatgc ggcgtttcga cctgaagata tcgaacaccg tccggctgac gatgatactg
      361 gtcaccggaa agccgaacca gacataggga cccaacagcg aagcggcggc gctcgactcg
      421 atccaggccg cgatcaacgc gccgcagacg attatcgacc agggcaccgg gcagatatcc
      481 ggccgttcca gatcgacacc gaaccaggat gcaagccaga ccttcgccga ggtctgctcc
      541 ccgaccgaat tcgtaaacag gcgaatatcg atcggttgcg ttcggatatg cggctgcagc
      601 acagactcgc accggccgcg aaaccgcttt tccagcgatt gcgcgcgcga aaccagcagg
      661 ccgctgaagc caaatccgat caggataagc aggccggcga ccaacagggc gatatgcgga
      721 aaagtcattc cgccatcatc tcctgccacg ctttctccaa cccgaaatag gtcagccgtg
      781 gcccaaaact gggcggtacc ctgctgcggt gatagatgcc gtgcaggcgg ccatcacgat
      841 cctggccctg aagctccagc gcgaaaaggt cgttgatggc gatgacatcg ccttccattc
      901 cgcagatttc cgacacctgt gtcacgcgcc ggccgccgtc gcgctgccgg gcgacctgga
      961 tgatcaggtc cacggcgcca acgatctggg tacggatggc ctgcgagggc aggcccatat
     1021 ggcccatctg caccatgttc tcgatgcgca ccaaggcgtc gcgggtattg ttggcatgga
     1081 tcgtggacat gctgccgtca tgccccgtgt tcatggcctg cagcatgtcg aacgcctcac
     1141 cgccgcgcac ctcaccgatg atgatccggt cgggccgcat ccgaagggcg ttgcgcacca
     1201 gttcgcgctg ggtcacctcg cccttgccct ccaaactgtt ggggcgtgtt tccagccgta
     1261 ccacatgcgg ctgctgcaac tgcaactcgg cggcgtcctc gaccgtcaac acccgttcgt
     1321 cgagcgcgat gaagcgcgac aatgcgttca tcatggtggt cttgcccgat ccggtgccac
     1381 ccgagatgat gacgttcagc ctgcagcgcg cggcgatttc cagcgccttg gcaacggtcg
     1441 gcgtcagggc gccgaactcg accagcttgg cgagatcgat cggcttcttg ccgaacttgc
     1501 ggatggacac gtaaggcccg tccagggcca gcggctggaa cacgatgttg acgcgggacc
     1561 cgtcggcaag gcgcgcatcg accatggggc tggattcgtc gacacgccga ccgaccgcgg
     1621 cggcgatgcg ctggcagatg ccagccagat gttgtctgtc gcgaaaccgt accgacgacc
     1681 gaacggtttt gccgcggcgt tcgatgaaga tgcgatccgg tccgttgacc atgatgtcgc
     1741 tgatcgtgtc atcgcccagc agcggctcca gcggcccaag gccgacgatg tcatgcacca
     1801 gctcggttgc caggccccgc tgctcccgcg cgttcaactg aatgcggttc tgcgtcgcga
     1861 tctccgagat caggcgttcc atgtcgccgg ccagacgttc cgacgacatc cccgccaccg
     1921 cgcccggttc cagccggctg aggcacaggg accggatttc gttgatcgcc tgtgccgacg
     1981 gcccggcctc ggcgcttgct tcgggcgcca gaacgataat cggttgcgaa tcacccatcc
     2041 gtttgccgaa ctgcggtagg actgaggcgc tcatttcgtt ttcctggcgc gaaaccactt
     2101 tttccgtttt gccgccggct cgggtggcgc cgaggccgcc agcgaatcca gcaatcccgc
     2161 gccggcgacc gctcgaccca gttccgaaat gaccttgcgg taggccgcta tcgcaacgac
     2221 ggcgggctcc ccaagattgg cggcgccgcg caactgccgc ggcagatcgg gcagcacgat
     2281 atcgaccttg cgcttcagac cttcctccac ctgccggcgg gtcagcccgc caggaatgcc
     2341 caggcggttc aacacgatca gtggtgccgg tccgtccgag gaagagacgg tgttgaatcg
     2401 cagcacatcc cgaaggctga ccaggctggg ttccatcacc agcacctgct ggtgcgccag
     2461 gccgatcaga tcgcggtata acggcacagg ggcgaaggga acgtcgagaa cgacaaagtt
     2521 gtaacgcttc cgcagcgcgt tgatcagcgt ctcggctgcg tcgtccgcat aggccggcaa
     2581 taccccgaca ggactttcgc cagccaggac atgcaaacgt tccgccgccg gttgcgccgc
     2641 gcgttcggct agcagcgtat cgatgcgaag gggtgattcc aacgccgcca ccaacccgtc
     2701 gccaggcgga aggttcagca ggaaggcggc gtttccacga tacagatccg gatcgaccag
     2761 cacggtgtgg tgacgcagtg tcaccccgaa atgccaggcg agatttgtgg cgatcgaact
     2821 ggcgccgcat ccgccacgca cgccggtgac cgcgagcacc cgtccgccca tcgagctgct
     2881 cgaagacgga gctcggccta gcacgaagcc gccgaaatga cgggacacaa ggtcgcgggc
     2941 caatggcttc ggcagatagt ccgccgcgcc aaggccacgc gtgacttcgc gataaaactc
     3001 catgccttcg tggtcgccga tcaccagcac gcagacgtcc ggctcgacga cagtggcgag
     3061 atccgcgagc gctttcaacg cgtgttcttc gccgctgata tcgacgataa ggatccgcgg
     3121 tgaggtggtc ttcagcatcg ccgcgtgggc ggcgcgaatt ccgccccggc ggatatccgg
     3181 tggctccggc agcatgtccg acagggatgc ccgaagcacc tgctccgaac cggtatcggc
     3241 tacaaaagcg atcagatggc gccggtcatg ccgcagcggg ttaccggcgc cgttcatgtc
     3301 catcgcgcga tggtcgatct cggctgtgct atccaccgct ggctccaccg ccgctggctc
     3361 cgccgccgct ggccgcaccg ccggaactgc cgccggggtc cggaagggct ttcagacgat
     3421 ccatcttgaa gcgatcgatc ggttgcacgg aaaccgcatc gtccaccgga ccgccgccat
     3481 gaccgcgtat caggtccgct ggattggcca ccatcgccgc gatattggac tcgttcgtgt
     3541 gacccaacgg ctctgcgttc aacttggcaa tcaggtcggt gttgtgctcg caggccgtca
     3601 atgcgacaga aacgacgaag agcaagggaa ttacaggtga caatcgcatg atatgcctca
     3661 ctggacgatg aatccggcca cgccgggggt tggggcaagt gtctggtgcc cggtatcgga
     3721 actggtgcgc atgtacagca tccggtcgag gtcgctggtg atcgggccgt tggtggggat
     3781 ccgcaacgcg ttgggatcgt tgacgggatt gacgacgtaa ggcgtcacca ggatcacgat
     3841 ctcggtttcg ccgcgctgga attgatcgtc gcgaaaggcc gggccgagta tcggcagatc
     3901 accgaggtag ggcagggcgc tacggttacc gctcatcgtg tcctgcagca gtccggcgat
     3961 ggcgaatgtc tggccgctgc ccaattcgac agtggtttcg gcacgtctga ccgtcagcga
     4021 tggaacgaca aggttgctgc cgcttgtggc aacggtcacg gcgttctgcg cactgagctc
     4081 actgacttcg ggtgcgacgt ggatggagat gcggccgtcg ctgaacatgg tgggcagaaa
     4141 gctgagcgaa acgccatagt ttttgtagct gaccgttact tgtccaagcg cgccgcccgc
     4201 gaccggaata gggtactggc cgccg
//
LOCUS       DATAVD010001192         2171 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2536521, whole genome shotgun sequence.
ACCESSION   DATAVD010001192 DATAVD010000000
VERSION     DATAVD010001192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2536521"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="VHX39_22760"
     CDS             complement(<1..185)
                     /locus_tag="VHX39_22760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HEX3994004.1"
                     /translation="MADTFDYVIVGSGAAGSVLANRLTEDPGATVCVLECGPPDRHPY
                     IHIPAGFIKMLFNPTYT"
     gene            278..694
                     /locus_tag="VHX39_22765"
     CDS             278..694
                     /locus_tag="VHX39_22765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994005.1"
                     /translation="MEYVCDAPRNRTWFRIVTEGEAVAESLEMRHTVEKYYRRERERA
                     IDAFHPSTSVFIEQDINKEDHIRRAMPLFLTLRDGDGSGLVTAMLPPRGKQGGGCIIV
                     GPSNVDPYAEHADAILALANHFGITLDRGSCYPYRR"
     gene            770..1294
                     /locus_tag="VHX39_22770"
     CDS             770..1294
                     /locus_tag="VHX39_22770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994006.1"
                     /translation="MAITLETFAADCHAALKTQPGTPGREQVRKLVEKALADQDFVAT
                     YIPPGTPERHLLYEDAELGFAILAHGYVGPKGSKPHDHGPSWAIYGQAAGETIMTAWD
                     LVERPTDGAPGKASFNHDYVMKPGDAYLYDVGVLHSPERKDDTRLLRIEGLNMAKVKR
                     FPYEVATVSQAAAE"
     gene            complement(1456..1845)
                     /locus_tag="VHX39_22775"
     CDS             complement(1456..1845)
                     /locus_tag="VHX39_22775"
                     /inference="COORDINATES: protein motif:HMM:NF018777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EthD family reductase"
                     /protein_id="HEX3994007.1"
                     /translation="MESVAACDQSAIGGNEMIKVLGLLTRKDSISHEAFVRHWFDIHG
                     PLALAVPGIRRYVQSHITGTRTRPDIPETDVQVDGIAELWYDDAETAQRAAASPEMKA
                     LTDDGALFIGQIKTFVIEERQIIPVVS"
     gene            complement(1794..>2171)
                     /locus_tag="VHX39_22780"
     CDS             complement(1794..>2171)
                     /locus_tag="VHX39_22780"
                     /inference="COORDINATES: protein motif:HMM:NF040438.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase domain-containing protein"
                     /protein_id="HEX3994008.1"
                     /translation="VPSVDADGNDIPGVRAPMVSAPLGTYTGWNPRMRGQGYGVQWKF
                     EGSYIPFPNTPSERVATGDPRLSIRERYVDWRTYADAITAAARALVSAGLMLEEDVDR
                     CAKAAERWNPSRHAINLLSEETK"
BASE COUNT          430 a          717 c          661 g          363 t
ORIGIN      
        1 caggtatagg tcgggttgaa cagcatcttg atgaagccgg ccgggatgtg gatgtacggg
       61 tgccggtcgg gcggtccgca ttccaggacg cagacggtgg cgccggggtc ctcggtcagg
      121 cggttggcca gcacagaccc cgcggcgcca ctgcccacga tgacatagtc gaacgtatcc
      181 gccattccgg tcccccgttt gtgccggctg tttgatcgcc agccgcttcc atcttatgct
      241 cgcgactcag accaatccaa gcccgggagg atcgcgcatg gaatatgtct gcgacgcacc
      301 acgcaaccgc acctggttcc gcatcgtgac ggaaggcgaa gcggtggccg agtcgctgga
      361 aatgcgccac accgtggaaa aatactaccg gcgggagcgg gagcgtgcga tcgacgcctt
      421 ccatcccagc acgtcggtgt tcatcgagca ggacatcaac aaggaagatc acatcaggcg
      481 cgcgatgccg ctgttcctga ccctgcgcga cggggacggt tcgggcctgg tcaccgcgat
      541 gctgccaccg aggggaaagc aaggcggcgg ctgcatcatc gtcggaccca gcaatgtcga
      601 cccctacgcc gaacatgccg acgcgattct cgccctggcg aaccattttg gtatcaccct
      661 ggatcgcggc agttgctacc cttaccgccg atagagcatg atcttgcccg accatacccc
      721 agagcagcta atccatgctc tgaaacagac tgaagttgga ggattgccca tggccatcac
      781 gttggagacg ttcgccgccg actgtcacgc cgccctgaaa acccagcccg gcaccccggg
      841 gcgggagcag gtgcgcaagc tggtggaaaa ggcgctggcg gaccaggact tcgtcgcgac
      901 ctacatcccg cccggcacgc cggagcggca tctgctatat gaagatgccg aactcgggtt
      961 tgccatcctg gcgcatggct atgtcgggcc gaagggcagc aagccgcacg accacggccc
     1021 gtcctgggcg atctacggcc aggcggcggg tgagacgatc atgacggcgt gggatctggt
     1081 cgagcgtccg accgatggcg caccgggcaa ggccagcttc aaccatgact acgtgatgaa
     1141 gccgggcgat gcctatctct acgacgtggg cgtgctgcac tcgccggagc ggaaggacga
     1201 tacccgcctg ctgcggatcg aggggctgaa catggccaag gtgaagcgct tcccatacga
     1261 agtggcaacg gtcagccagg cggcagcaga ataatgccgc gccggtagca tcgccacggc
     1321 ggcgagaccc gcgtcacatc gccacggcgg caacgcccgt agcgtcgtca tggcggcaac
     1381 gcccgcgtca cgtcgccacg gcgacggcat ccgtgcagta tcgtcatggt cggcgcaggc
     1441 cggccatcca cgccttcacg acaccaccgg aataatctgc cgctcctcga tcacaaaagt
     1501 cttgatctga ccgatgaaca gcgcaccgtc atccgtcagc gccttcattt cgggtgacgc
     1561 cgcagcacgc tgagccgtct ccgcgtcatc ataccaaagc tcggcgatac catcgacctg
     1621 cacatcggtc tccggaatgt cgggccgcgt gcgcgttcca gtgatgtgcg actggacata
     1681 acggcgaata cccggcacag ccaaagccag cggcccgtga atatcaaacc agtgccgcac
     1741 gaacgcctcg tggctgatgc tgtccttccg ggtaagaagc ccaagaacct tgatcatttc
     1801 gtttcctccg atagcagatt gatcgcatgc cgcgacggat tccaccgctc cgccgccttc
     1861 gcgcagcgat cgacatcttc ctccagcatc agcccggcgc taaccagtgc tcgggcggcc
     1921 gcggtgatcg catcggcata agtccgccag tcaacgtacc gctcccgaat ggataaccgt
     1981 ggatccccgg tggcaacacg ttcggacggc gtgttcggga acgggatgta gctgccctcg
     2041 aacttccatt gcacaccata tccctggccc cgcatgcgcg ggttccatcc ggtgtaggtc
     2101 cccagcggcg ccgagaccat cggtgccctg acgcccggaa tgtcgttccc atcagcatcg
     2161 acagagggca c
//
LOCUS       DATAVD010001193         3145 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3464992, whole genome shotgun sequence.
ACCESSION   DATAVD010001193 DATAVD010000000
VERSION     DATAVD010001193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3145
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3464992"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1132)
                     /locus_tag="VHX39_22785"
     CDS             complement(<1..1132)
                     /locus_tag="VHX39_22785"
                     /inference="COORDINATES: protein motif:HMM:NF018448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HEX3994009.1"
                     /translation="MSLDSVEVATDPADMAATRSGLVLAFAQLLYVNGQSTDQTVVMA
                     EQFGRDLGLNVTIMPRWGELQLRSQEGGAGVVSAAAADPAGVDMERVVSAMRMMQEVR
                     AGRLRPAAAMQTIHEIAQTPPAPTWLFALAAGAGAAALAVLFGVQHLSAAVLIFLSAT
                     AGAALRRLLARFSSNVFLQPAGAALLAGVIGALAVRYQLSSSLRLVAVCPCMVLVPGP
                     HVLNGAMDLMRARMHLGSARLIYAGLIIVAISVGLLLGLSLLGVSLPVDEVGRPVPLW
                     QDLIAAGVAVAAYSIFFSTPLHMLPWPVAVGMLAHALRWGVLTVAGASAAVGALVACL
                     VVGLILTPVARRTHMPFAAIGFASVVSMVPGVFLFRMASGLWL"
     gene            complement(1129..2535)
                     /gene="fumC"
                     /locus_tag="VHX39_22790"
     CDS             complement(1129..2535)
                     /gene="fumC"
                     /locus_tag="VHX39_22790"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008850488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HEX3994010.1"
                     /translation="MAGVRTESDSLGVVEVPADRLWGAQTQRSLEHFSIGKDLMPREM
                     ITAYAILKKAAAAANHAGGRLDEPLYKLIVQVCDEILAGQHADMFPLHVWMTGSGTQF
                     NMNVNEVISNRCCQMAGTPLGSKAPVHPNDHVNMAQSSNDSFPSAMYIAAAVNVKQRL
                     VPAVAALHTAIDAKAQEWSEIVKIGRTHMQDATPLTLGQEWSGYAGMLADNLERIEAS
                     LHGVYCLALGGTAVGTGINSAPGFAEAAAAEIASLTGLPFVTAPNKFTVQGAHDALVQ
                     LSGTLRTLAVSLYKIANDIRLMSCGPRAGFAELEIPENEPGSSIMPGKVNPTQCEALT
                     MIAVQAMANDVAVGFGGAGGYLEMNVYKPLIIFNITHSITIMTDGCENFRKFLVEGTR
                     PNLKKINEYVERSLMLVTALAPVIGYDKASKIAHHAMDHDLTLKAAALQLGFVTEAEF
                     DRVVDPAKMVTPYVAGSA"
     gene            complement(2757..>3145)
                     /locus_tag="VHX39_22795"
     CDS             complement(2757..>3145)
                     /locus_tag="VHX39_22795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="copper resistance protein"
                     /protein_id="HEX3994011.1"
                     /translation="FFASLRDIEVLQHRVFVLLIVGFALFEWRVRAGNWNNKTAALVF
                     PLMCAAGGTLLLTHSHAISNVKEQLLIEVTHTPLALAGIVAGWSRWLELRLDPLDSPM
                     LKRIAGWMWPVCLVLCGLILLDYREA"
BASE COUNT          692 a         1043 c          890 g          520 t
ORIGIN      
        1 gcagccacag cccgctcgcc atccggaaca ggaacacccc cggaaccatc gacaccaccg
       61 aggcaaatcc gatcgctgca aacggcatgt gcgtgcggcg agcgaccggg gtcaggatca
      121 gccccacgac gaggcaggcc accagggctc cgacagcggc gctggcgcca gccacagtca
      181 gaacgcccca ccgcagggca tgggccagca tgccgaccgc caccggccag ggcagcatat
      241 gcaacggcgt cgagaagaag atgctgtagg ccgccacagc aactccggcg gcgatcaggt
      301 cctgccacag cggcaccggc cgtcccacct cgtccaccgg cagagacacg ccgagaagcg
      361 acagccccag aagcagcccg actgagatcg caacgataat cagtccggcg taaatcagcc
      421 gggccgagcc cagatgcatc cgagcccgca tgaggtccat ggcaccgttg agcacatgcg
      481 gcccaggaac caggaccatg caaggacaca ccgcgacaag gcgcaatgac gaactcagtt
      541 ggtaacgaac cgccagcgca ccgatcaccc cggccagcaa cgccgcgccg gcgggttgca
      601 ggaagacatt gctgctgaac cgagccaaca ggcgacgcag cgcggcaccg gccgtcgcgc
      661 tgagaaaaat cagcacggcg gccgacagat gttggacccc gaacaacact gccaatgccg
      721 ccgcacccgc cccggccgcc agcgcaaaca gccacgtcgg agccggcggc gtttgggcga
      781 tctcatgaat cgtctgcatc gccgccgccg gtctcagccg gccggcgcgc acctcctgca
      841 tcatccgcat cgcggagacc acgcgttcca tgtcgacgcc ggccggatca gcggccgcgg
      901 cagagacaac gccggccccg ccttcctgag accgcagttg cagctcaccc cagcgcggca
      961 tgatggtcac attcagtcca agatcgcggc cgaattgctc ggccatgacg accgtctgat
     1021 cggtgctctg accgttcaca tacagcaact gggcgaacgc aagcaccaaa ccggagcgtg
     1081 tcgcagccat gtctgccggg tcggtggcaa cctcgacgct gtcgaggctc atgctgagcc
     1141 agcgacatag ggtgtgacca ttttggcggg atcgacgacg cgatcgaact cagcctcggt
     1201 gacaaagccg agctgcaatg cggctgcctt caacgtcaga tcgtggtcca tcgcgtggtg
     1261 cgcgatcttc gaggccttgt cgtaaccgat gactggcgca agcgccgtca ccagcatcag
     1321 cgagcgttcg acatattcgt tgatcttctt caggttgggc ctcgtgccct cgaccaggaa
     1381 tttgcgaaaa ttctcgcaac cgtcggtcat gatcgtgatc gaatgggtga tattgaagat
     1441 gatcagaggt ttgtagacgt tcatctccag atacccgccc gcgccaccaa atcccaccgc
     1501 aacgtcattc gccatcgcct gaaccgcaat catggtcaga gcctcgcact gggtcggatt
     1561 gaccttgcct ggcatgatgg atgagccagg ctcgttttcg ggaatctcca gttctgcaaa
     1621 tccggcgcgc gggccgcagg acatcagacg aatgtcgttg gcaatcttgt acagcgacac
     1681 tgccagagtg cgtagcgtgc cggacaactg gaccagtgca tcgtgcgcgc cctgcacggt
     1741 aaatttgttg ggtgcggtga caaacggcag gccggtgagg ctggcgattt cggccgcagc
     1801 cgcctcggca aagcccggtg cagaattgat gccggtgccg acagccgtac ctcccagagc
     1861 gaggcaatac acgccgtgca aagatgcttc gatccgctcc agattatccg ccagcatccc
     1921 ggcatagccc gaccactcct ggcccaatgt cagcggcgtc gcatcctgca tgtgcgtccg
     1981 cccaatcttc acaatctcac tccactcctg ggctttcgca tcaattgcag tgtgcagcgc
     2041 ggcgaccgcc ggaaccagac gctgctttac gttgacggca gccgcgatgt acatcgccga
     2101 cggaaacgag tcgttcgatg attgtgccat gttgacgtga tcgttggggt ggaccggtgc
     2161 cttgctgcca agcggagtgc cggccatttg acagcagcga ttggaaatca cctcgttgac
     2221 gttcatgttg aactgggtgc cgctgccggt catccaaacg tgcaacggaa acatatccgc
     2281 gtgctgaccg gcaagaattt catcgcagac ctgaacgatc agtttataaa gtggctcgtc
     2341 gagccgtccg ccggcatggt tcgccgcggc ggcagccttt ttcaatatcg catatgccgt
     2401 gatcatctcg cgcggcatca gatccttgcc gatgctgaaa tgctcgagcg aacgctgggt
     2461 ttgcgcgccc cagaggcggt ccgcgggcac ttcgaccacg ccaaggctgt cactctccgt
     2521 tctcactccg gccatgtgat gtctccaagg ttgcctgcgt tatcctttgg cgggttgccg
     2581 cctgaccggc ttccgcaaat tccggtgaat gctcgccaga ccacctgtgc gatgcccaga
     2641 attcaacaaa ttgctcatag ggggagaatg tcaacgaacg tcggtgcatc acgacaaaat
     2701 cataccgggc agagcaaaat tcaacaacgc acggcgaccg ccgcgcaaca gccgcgttat
     2761 gcctcccggt aatccagcaa aatcaaccca cacaaaacca aacacaccgg ccacatccaa
     2821 ccggcaatcc gcttgagcat cgggctgtcc agcggatcca accgcaattc cagccaacgt
     2881 gaccatccgg caacgatgcc cgcgagagcc agcggggtat gagtcacctc gatcagcaac
     2941 tgctccttca cgttggaaat ggcgtggctg tgcgtcagca acaacgtccc cccggccgcg
     3001 cacatcaacg gaaacaccag ggccgcagtc ttgttgttcc agttgccggc ccgcacccgc
     3061 cattcgaaca acgcgaaccc aacgatcaac aacacgaaca cgcgatgctg caacacctcg
     3121 atatcacgca aactggcgaa aaagc
//
LOCUS       DATAVD010001194         1811 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1044730, whole genome shotgun sequence.
ACCESSION   DATAVD010001194 DATAVD010000000
VERSION     DATAVD010001194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1811
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1044730"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..607)
                     /locus_tag="VHX39_22800"
     CDS             complement(<1..607)
                     /locus_tag="VHX39_22800"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX3994012.1"
                     /translation="MSRFDDYATKYSCIHMRRERGILEMRFHTDNGPLRWGLVPHGEL
                     PDAFADVARDRDNRVVIMTGTGDEWSGIRATPGSSAIAPGITSNAFDRVHWEGRALLM
                     NLLNIEVPVISAINGPAWRHGEIPLLSDIVLASDTAAFQDSAHFPNGLVPGDGMHIVM
                     PLLLGLNRGRYFLLTGQTLSAHEAKDLGLVAEVLPQDKVLPR"
     gene            complement(604..>1811)
                     /locus_tag="VHX39_22805"
     CDS             complement(604..>1811)
                     /locus_tag="VHX39_22805"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3994013.1"
                     /translation="VSAAKFAIVASGFKLPGVGFNTGRIHRTASRGLIETARPPKEGT
                     KMAQVAEATGEFRGTTVRDDATLAAWLSKHTEPALEPDLPIIDPHHHFWDGTARGSYL
                     LPDLLADIGGGHNIVSTVFLECRAMYRKSGPREMAAVGEVEFVNGIAAMSASGNYGNC
                     RVAEAIIGGGDLTVGARVRELLEAEIAAAGGRLRGLRHGVAWDRHESVQKYASRVVAE
                     HQVMDPKFREGMAQLAPLGLSFESWQYHPQLPDAIDLARAFPGTTIILNHVGGILGVG
                     PYAGHRAEILTEWRKNMVELAKCPNVNMKLGGLGMVSVGYDFHQRDVPPSSEDLAAAW
                     RPYIEHCIEAFGVDRCMFESNFPPDKQSGGYTELWNAFKRITASASAAEKQALYSGTA
                     ARVYRITAP"
BASE COUNT          330 a          577 c          567 g          337 t
ORIGIN      
        1 cgcgcggcag gactttgtct tgtggcaaca cttccgccac caaccctaaa tcctttgcct
       61 catgggctga caaagtctgg ccggtcagca ggaaatagcg gccgcggttc aagcccaaca
      121 gcagaggcat gacgatgtgc atgccgtcgc cgggcaccag gccgttcggg aaatgcgctg
      181 aatcctgaaa cgccgccgtg tcggacgcca gcacgatgtc ggacagcaac gggatttccc
      241 cgtgccgcca tgccggcccg ttgatcgcgg aaatgactgg cacttcgata ttgagcaaat
      301 tcatcagcag cgcgcgcccc tcccaatgca cgcgatcgaa cgcgttggag gtaatgcccg
      361 gggcgatcgc actcgagccc ggcgtcgctc ggatgccaga ccattcgtcg ccggttccgg
      421 tcatgatcac gacgcggttg tcacgatcgc gggccacgtc ggcgaaggcg tcgggcagct
      481 cgccgtgcgg gacaaggccc cagcgcagcg gcccgttgtc ggtatggaac cgcatttcca
      541 ggatgccgcg ctcccggcgc atgtggatgc acgagtactt ggttgcgtag tcgtcgaacc
      601 ggctcatggc gcggtgatcc gatagacacg cgccgcagtg ccgctgtaca gcgcctgctt
      661 ttccgcggcg gaggcgctgg cagtgatccg cttgaaggcg ttccacaact cggtatatcc
      721 gccggattgc ttgtcaggcg ggaaattgct ctcgaacatg caacggtcga cgccgaaggc
      781 ttcgatgcaa tgttcgatat agggacgcca tgcggcggca agatcctcgg acgagggcgg
      841 cacgtcgcgc tgatggaagt cgtagccgac cgacaccatg cccaaaccgc caagcttcat
      901 gttgacgttg gggcatttcg ccagttcaac catattcttg cgccattcgg tcagaatttc
      961 cgcgcggtgc ccggcatacg gtccgacgcc gagaatgccg ccaacgtggt tgagaatgat
     1021 tgtcgtgccg gggaacgccc gcgccagatc gatcgcatcc ggcaattgcg ggtgatactg
     1081 ccaactttca aaactcaacc ctaatggtgc cagctgagcc atgccttccc ggaacttcgg
     1141 gtccatcacc tgatgttccg ccaccacgcg cgacgcgtac ttctgcacgg attcgtgacg
     1201 atcccaggcg acgccgtggc gcaggccgcg caaacggcct ccggcagcgg cgatttccgc
     1261 ttccagcagt tcgcgcacac gggcaccgac ggtcagatcg ccgccgccaa tgatcgcctc
     1321 ggccactcgg caattgccgt agttgcccga ggcgctcatg gcggcgatgc cattgacgaa
     1381 ctcgacctca ccgaccgcgg ccatctcgcg cgggccggac ttgcgataca tggcgcggca
     1441 ttcgaggaac acggtcgaga cgatgttgtg cccgccgccg atgtcggcca acagatcggg
     1501 caggaggtaa ctgcctcttg cggttccatc ccagaaatgg tggtgcggat cgatgatcgg
     1561 caggtccggc tccagcgccg gttcggtgtg tttggacagc catgcggcaa gggtggcatc
     1621 atcgcgcacc gtggtgccgc ggaattcgcc tgttgcctct gcgacctggg ccattttggt
     1681 tccctccttt ggtggtctgg cggtttcgat caagccgcgg ctggcggtgc gatggatccg
     1741 gccagtgttg aacccgacgc ccggcagctt aaacccggac gcgacgatgg caaacttcgc
     1801 ggcactcacg c
//
LOCUS       DATAVD010001195         2402 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1044731, whole genome shotgun sequence.
ACCESSION   DATAVD010001195 DATAVD010000000
VERSION     DATAVD010001195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2402
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1044731"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            296..1531
                     /locus_tag="VHX39_22810"
     CDS             296..1531
                     /locus_tag="VHX39_22810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994014.1"
                     /translation="MPAVAIAQSGPVVRPQVDTGTTFAILVSLSVCHMLNDLNQSLVP
                     ALYPLLKTSYHLDFAQIGLITLASQLTASMLQPVVGLVTDRRPQPYSLPVAMSCSLVG
                     LLLLSVANSYPVIICAAALVGVGSSVFHPEASRVARMASGGRYGFAQSLFQLGGSCGS
                     ATGPLLAAFIVLPRGQASVGWFSLVALLAMAMLTYVGAWYSRHPAMAARRGRRMPPQA
                     AASPVPRATVIMAMSIILILLFSKNVYTASLSSYYIFFLIEKFHVTVQNAQLHLFVFL
                     GSVAIGTFAGGPIGDRFGRKPVIWFSIVGALPFALLLPYASLLWTGVLSVIIGLIIAS
                     AFSAIIVYAQELLPGRVGMVAGMMFGFSFGLGGLGAAALGRIADVTGIEFVYHVCSFL
                     PVIGLLTAFLPNIEVRNRG"
     gene            1581..>2402
                     /locus_tag="VHX39_22815"
     CDS             1581..>2402
                     /locus_tag="VHX39_22815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994015.1"
                     /translation="MARLPVLTALVLLSHAAWADETCRYSGATSYDGQVSVQSTAAEA
                     NGGTTVNVAARVKARSFGLIDWQYLYQEIGTWREGELQSVGANHRYSVVGSIRRQQWD
                     LFRRTPQGMQAWRVQAKTLPDFESHHPGFVRHWSPASFGENWLPDYAAAPPERRADLD
                     LAPQLMPPGLGTPLLLAFYWVRWAGDQAREVPVFLPGFKHDARATIRVVSMGVEAGGL
                     LHLHSSVRHPQLSETEDSIGDAWISGDHHLVRETFEAHASMGSAHGELHLDGCQGE"
BASE COUNT          402 a          703 c          761 g          536 t
ORIGIN      
        1 cccagtagcc gcatagcaaa aggcagatcc atgcgaccgg cgccgcgtag ccgtgatttc
       61 cgttaccgtc tttccttgaa tgaggcatct tatataatct cctgggcgcc ggttcctggg
      121 tcgcccgata caacagccat atcacatctc tttatggcaa atgttagcgc aaattcgaca
      181 caaattgcga caacgcgggt atctgccact caatcgatgc atggctctta tcacatcacg
      241 gcatgatatt gcacgcctgt agcgatgtcc ggaagaaatg atgagcgaaa ataccatgcc
      301 agccgtcgct attgcgcaat caggtccggt ggtgcgacct caggtcgaca ccggcaccac
      361 attcgcgatt ttggtgtcgt tgagtgtgtg tcacatgctg aacgatctga atcagtcgct
      421 ggttccagcc ctgtacccat tactcaagac ctcctaccac cttgatttcg cacaaatcgg
      481 tctgatcact cttgcatcac aattaactgc atcaatgttg caaccggtgg ttggactggt
      541 gaccgaccgg cggccgcagc cctactcgct gcccgtcgcc atgagctgca gtctcgttgg
      601 cttgttgttg ctgtcggtgg ccaattccta tccggtgatc atttgcgcag cggccttggt
      661 cggggtcggg tcatcagtct tccaccccga ggcgtcccgc gtggcgcgca tggcttccgg
      721 cggacgctac ggcttcgcgc aatcgctgtt ccaactgggc gggtcgtgcg gctcggcgac
      781 cggaccgctg ctggcagcct tcatcgtgct gccgagaggc caggccagcg tcgggtggtt
      841 ctcattggtc gcactgctgg cgatggcgat gctgacttat gtcggggcct ggtacagccg
      901 gcacccggcc atggcggcgc gacgcggtcg acggatgccg ccgcaagcgg ctgcgtcacc
      961 ggtgccgcgg gcgaccgtca tcatggcgat gtcgatcatt ctgatcttgc tgttctccaa
     1021 gaacgtctac acggccagcc tgagttcgta ctacatcttc tttctgattg agaaattcca
     1081 cgtcaccgtg cagaacgcac aattgcatct gtttgtgttc ctcgggtcgg tggcgatcgg
     1141 gacctttgcc gggggaccga tcggtgaccg tttcggacgc aagccggtca tctggttctc
     1201 gatcgtggga gcccttccgt tcgcgttgct gctgccttat gccagcttgc tgtggaccgg
     1261 cgtgctgagt gtcatcatcg gcctgatcat cgcctcggcg ttctcggcca tcatcgtcta
     1321 cgcccaggaa ctgctgcctg gccgggtcgg gatggtggct gggatgatgt tcggtttttc
     1381 gttcgggctt ggcgggctgg gtgcggcggc actcggacgc atcgccgacg tgaccgggat
     1441 cgagttcgtg tatcacgtgt gctcgtttct gccggtgatt ggcctgctga ccgctttcct
     1501 gccgaacatc gaagtgcgca accgcggcta ggacgcgggt cggttcgatc ggccaggatt
     1561 tcgcgaaacg gacgggtgtg atggcgcgcc tgcccgttct cacggccttg gtcctgctca
     1621 gtcacgccgc ctgggcggac gagacatgcc gctattccgg cgcgaccagc tatgacggcc
     1681 aggtcagtgt gcagagcacg gcagcggagg cgaatggcgg cacgacggtc aatgtcgctg
     1741 ctcgtgtcaa agcgcggtcg tttggactga tcgactggca gtacctctac caggaaatcg
     1801 ggacgtggcg ggaaggtgaa ctgcagtcgg tcggggcgaa ccatcggtac agcgtggtcg
     1861 gatcaatccg gcgtcagcaa tgggacctgt tcaggcgaac cccgcaaggg atgcaagcct
     1921 ggcgcgttca ggcgaaaacc ctgcccgact tcgaatccca ccatccgggc ttcgtacgcc
     1981 actggtcgcc ggcatcgttt ggagagaact ggctgccgga ctatgcggct gcacctcccg
     2041 agcgtcgcgc cgatctcgat ctggcgccgc agttgatgcc tcctggcctc gggacaccgc
     2101 tgctgctggc gttctattgg gtgcggtggg ccggcgacca ggcgagggag gttccggtgt
     2161 tcctgccggg gttcaaacat gatgcccgcg ccacgatccg ggtcgtttcg atgggcgttg
     2221 aagcgggtgg tttgttgcat ttgcactcgt ccgtgcgtca cccgcaactg agcgagaccg
     2281 aggactcgat cggcgatgca tggatttccg gagaccatca tttggttcgg gagacgttcg
     2341 aggcgcacgc gagtatgggc agtgcacatg gggagttgca tctggacggg tgtcagggtg
     2401 aa
//
LOCUS       DATAVD010001196         5181 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1415698, whole genome shotgun sequence.
ACCESSION   DATAVD010001196 DATAVD010000000
VERSION     DATAVD010001196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5181
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1415698"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            493..1710
                     /locus_tag="VHX39_22820"
     CDS             493..1710
                     /locus_tag="VHX39_22820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994016.1"
                     /translation="MLPRQTLNVTAVSGISTSFSSKSELAVHLSTDGTALTLMGYVAK
                     PNVLDVSNANTPGNIDPTNTDIQTPTYRAVVEIDLARWRDGVTATPVNAYSGNNGRAA
                     ILAADVNGSGQNEYLMAGNAGNGSGTEPVDIVNDTGVQTIVPHSTDPNTTVIGAQQGT
                     PGSANGFEYGFAVTQLGYPADKSGKDDNFRGLTIANNMLYVSKGSGGNGINTVYQVTP
                     GHPGLPRASDGPTTRISILPGFPTGLASAISEKTPATEFYPFGLWFANATTLYVADEG
                     SQDLNADPNAGLQKWIFDGSKWTLAYTIQAGLNLDQPYSVADYPEQYNPATTGLRNLT
                     GFVAGNTVRLFATTATFSNLGDPGADPNAVVQVVDQLDATVLPAGEAFATVVKPRTLH
                     VYRGVAYVDTKDR"
     gene            1880..2811
                     /locus_tag="VHX39_22825"
                     /pseudo
     CDS             1880..2811
                     /locus_tag="VHX39_22825"
                     /inference="COORDINATES: protein motif:HMM:NF019228.4"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ISAzo13 family transposase"
     gene            2828..3049
                     /locus_tag="VHX39_22830"
     CDS             2828..3049
                     /locus_tag="VHX39_22830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994017.1"
                     /translation="MIALACSDPPKGRAHRPLKQDPLAGNGVDADIQRVGDALIASAF
                     RIHDRNVRAFFRRSETRFLGDFPCDPVAG"
     gene            complement(3081..3752)
                     /locus_tag="VHX39_22835"
     CDS             complement(3081..3752)
                     /locus_tag="VHX39_22835"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3994018.1"
                     /translation="MTQPLQPMNLEKLYRYRFSDQERQGLLLVWKALVKGYLSRWIRT
                     EHAVLDYGAGTCYFINNVSAARRVALDINPDVQRNCAEGVEFVCGDSPEVLGEQKFDV
                     IFVSNLLEHLDSAETVVALLEQLLYALADQGSLIILQPNFALVGGRYFDFIDHKTILT
                     DRSLDEALALAGGRITFMKRRFLPYTSKSRLPKAAWLVRAYLRLPLAQFLLGKQTLVV
                     ATRAN"
     gene            complement(4173..4931)
                     /locus_tag="VHX39_22840"
     CDS             complement(4173..4931)
                     /locus_tag="VHX39_22840"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3994019.1"
                     /translation="MVIPAHNEEGNITETVRQFASALRDADIKYEILVINDNSTDATE
                     HRLATLMAEDPGVRYLNNPPPNGFGFAVRHGLAEFRGDAVAIVMADASDSPADLVSFY
                     HKLQSGYDCVFGSRFVRGGRVIDYPKPKLVLNRLANLLIRILFLLTYNDVTNAFKLYR
                     RTAIAGIQPLLSQHFNLTVELPLKCIIRGYRYAVLPNSWANRKTGVSKLRIKEMGSRY
                     LFVILYCWLEMTLSRGDYRNSERWWEGQLQVWHR"
     gene            complement(4998..>5181)
                     /locus_tag="VHX39_22845"
     CDS             complement(4998..>5181)
                     /locus_tag="VHX39_22845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-dependent epimerase"
                     /protein_id="HEX3994020.1"
                     /translation="GRPMNWKYAEQNRTGDHIWWISDVRRFQADYPQWQYRYGIDEIL
                     AEIIDGVGSRQKLAGD"
BASE COUNT         1101 a         1582 c         1520 g          978 t
ORIGIN      
        1 ctattgcgat ggagtgacgg ataacttccg catcatctca cccaaggatt ttcggattct
       61 gacgtgagca gggtgtattg taattcatat atcatacggc agaaaaaaac ggccgttaga
      121 ctgcccccat tgtcgggggg gaagataatg tcaggtaaat ggcttgccga tgaggttgcg
      181 cggcagatcg catcatgccg ttcgctccat aatccgcggt acttcgtcct ggctctgggt
      241 gggctgtttg tcgccggccc ggccagcgcc gacggcgtcc tgtttgtcac cagcagccgg
      301 tatgtgggca ccgccgatac cgtcacggtc ggccagacgc tgccgaacag caccggcgcc
      361 accgctgttg ccgacgggtc ctatccagac gtgttcgcca acgacacggc ggacggcaat
      421 ttcggaatca ccgcgccgat cgaactgcga gcctatgagg tcgtatcggg tgaatggcgg
      481 ggtgataccg cggtgttgcc gcgccagaca ctcaatgtca cagcggtgag tggcatcagc
      541 acgagtttca gctccaagtc cgagctggcg gtgcacctgt caaccgatgg aacggccctg
      601 acgctgatgg gctatgtcgc gaagccaaac gtgctggatg tatcgaacgc caacacgccc
      661 ggcaacatcg atcccacaaa cactgatatc cagacgccga cctatcgtgc cgtggtggaa
      721 atcgacctgg cccggtggcg tgatggcgtc accgcaaccc ccgtcaatgc ctatagcggc
      781 aacaatggcc gggcggcgat cctggccgcc gacgtgaacg gatccggcca gaacgaatac
      841 ctgatggccg gcaacgccgg caacggctcg ggcaccgagc ccgtcgacat cgtcaatgat
      901 accggcgtgc agaccatcgt gccgcacagc accgacccga acaccaccgt gatcggcgca
      961 caacagggta cgcccggcag cgcgaatggc ttcgagtacg gattcgccgt gacgcaactt
     1021 ggctatcctg ctgacaagtc gggcaaggac gacaacttcc gcggcctgac gatcgccaac
     1081 aacatgctct atgtgagcaa aggcagcggc ggcaacggca tcaacacggt ctatcaggtg
     1141 acccccggcc acccagggct gccgcgggcc tccgatgggc cgaccacccg gatctcgatt
     1201 ctgcccggct ttccgaccgg ccttgccagc gcaatcagcg aaaaaacccc agccacggaa
     1261 ttctatccgt tcggcctgtg gttcgccaac gcaacgacgc tttatgttgc cgatgaaggc
     1321 tcccaggatc tgaacgccga tccgaatgcc ggcctgcaga aatggatttt cgacggcagc
     1381 aagtggacgc tcgcatacac gatccaggcc gggctgaacc tcgaccaacc ctacagtgtt
     1441 gccgactatc ccgaacaata taacccggcc acaacaggcc tgcgtaacct gaccgggttc
     1501 gtggcgggca acaccgtgag gctgttcgcg acgacggcca cgttcagcaa cctcggcgat
     1561 cctggcgcgg acccgaacgc tgtggtgcag gtggtggatc agcttgatgc gacagttctg
     1621 cccgccggtg aagccttcgc caccgtggtc aagccgcgca cgctccacgt ctatcgtggc
     1681 gtggcctacg tcgacaccaa ggatcggtag cgacgcgacc gtccaccccc gccttcatgt
     1741 tgatcggatg acggttgcgc gggccggcgg ctcctgttgc atatgatgtc ggcgaagttc
     1801 tttgatcgtc ccccggttca gcgccgggcg ttcgagctgc tgtaggccgc tttgtagcca
     1861 gtaactgcgg tcgggaccgg tgacctatgg cgatcccgaa cggccattgc gctgggtctc
     1921 gaagagccgc gagaagcttg cggcggcgct gcgggacatg gggcacaccg tatcgccgca
     1981 gacgattgga cggctgttgc tgatgcttga gtgtcgccgc aggggtaacg ccaaggctga
     2041 cgaaggccgg cagaacccgg atcgcgacgc tcagttcaag catgtcaacc aacgcgtgct
     2101 ggcgatgcag acgcgcggcc agccggtgat ttcaattgat accaagaaaa gaagctggtt
     2161 ggcaacttca ggaatgccgg cacggattat tgcccgaagg gtaggccgcg acgggtccac
     2221 gtgcatgatt tccccgatcc gacacaaggc aaggcagtcc cgtatggcgt ctatgccgtg
     2281 accgataaca gtggctgggt cagtgttggc atcaaccatg acaccgccga attcgccgtc
     2341 aactcgatcc gctgctggct gccgcggatg cgctgccccc gctatcctgg cgcagaccgc
     2401 ctgatgaaca atgccgactg tggcggatcg attggcgcgc gggtccgcct gtggaaggtc
     2461 gaactccaga agcttgccga cgagacggga ctgatcctgg aggtttgcca ttatccatcc
     2521 ggtaccccga agtagaacaa gaccaagcac cggatgttct gccacatctc acagaactgg
     2581 ggggccgacc cgctcaccag ccgcgaggcg atcgtcgaac tgactggggc gaccaagacc
     2641 aagaccggcc tcacgattgc ctgtgaactc gataccagga ccggcgagaa aggcatcaag
     2701 gtctctaacg ccgagatcca ggccttggcc atcaagggcg atgatttcca cccagagtgg
     2761 aattacacgc ttacccccag gaccggatac ccagcggtta ttttggtgtg aagcctaagc
     2821 aaaccgcgtg atcgcgctcg cctgctccga cccgcccaaa ggccgtgcgc accggccact
     2881 gaagcaagac ccgcttgcgg gcaatggtgt cgatgctgat atccagcgcg tcggcgatgc
     2941 actgattgct tcagccttcc gcattcatga cagaaatgtc agagcatttt tccggcgttc
     3001 cgaaacaagg tttctgggcg atttcccttg tgaccctgtc gcggggtgat cactgacccg
     3061 acatcaagga aaccgcccac tcaattggca cgcgttgcga cgacgagcgt ctgctttccc
     3121 agaaggaact gagccaaagg caggcgtaga taggcacgaa cgagccaggc cgcctttggt
     3181 aggcggctct tcgacgtata gggcaggaat cgccgcttca taaatgtaat ccggccgccg
     3241 gccagggcca aagcctcatc cagactacgg tccgtcagaa tggtcttgtg atcgatgaaa
     3301 tcgaaatacc ggccgccgac cagggcaaag ttgggctgca ggataataag agatccctga
     3361 tcagcaagcg catatagaag ctgctcgagc agcgccacga cagtttccgc gctgtccaga
     3421 tgttcaagca gattactcac gaaaataacg tcgaatttct gctcacctag aacctcgggg
     3481 ctgtcgccgc agacaaattc caccccttcg gcacagttgc gttgcacgtc gggattgatg
     3541 tcgagtgcaa cacgccgggc cgcactgacg ttattaatga agtagcaggt gccggccccg
     3601 taatccaata ctgcgtgctc ggtgcggatc cagcgggaca ggtatccttt caccagggcc
     3661 ttccacacca gcagaagccc ctgccgctcc tgatcggaga accggtagcg gtacagtttc
     3721 tcaaggttca tgggttgcaa cggctgcgtc acgtttcact ccggtccctc aagatcagtt
     3781 cggtcgaacc gatgatatcg aagttgcccc cactgtcttg gcataaactg agcgagacga
     3841 gatggttcag cgagagatat agcttcttca gaggcgctgg caatacaaat caggtcagcg
     3901 agggaaaccg ccgcgcggag acacggttct tcgacgactg gcaccagcac cggttacgca
     3961 tcaagggcgc gcgcaacttc agtcagtacg gccggcgcat gcgccagcca gatccgcaca
     4021 ttctgctgcg tcgacgaact gatcaaggga ctgatgcgcc tgatggcaac ggatgacgat
     4081 gttaccgggc ccagtagccg gacatgtatt ggccgtgcgg cacaatctgc ctggtttgac
     4141 ccggcaagcc cacatcctcg cgagccatca gcctagcggt gccatacctg caattggcct
     4201 tcccaccatc gctccgaatt acggtagtcg ccgcgtgaca gcgtcatttc cagccagcag
     4261 taaaggatca caaacaggta gcgcgaaccc atttccttga tgcgcagctt ggaaaccccg
     4321 gttttgcgat ttgcccagga gttcggcagc accgcataac gatagccacg aatgatgcac
     4381 ttcagcggca gctccaccgt caggttgaaa tgctgggaaa gcagcggctg gatgccggcg
     4441 atagccgtac gccggtaaag tttgaaggcg ttcgtgacgt cgttgtaggt gagtaggaac
     4501 agaatgcgga tcagcagatt ggccagccgg ttcaggacca gcttgggctt gggatagtcg
     4561 atgacccgtc cgccgcgcac gaagcgcgaa ccgaacacgc aatcatagcc gctttgcagc
     4621 ttgtgataga agctcacaag gtcggcaggg ctgtccgagg cgtcagccat tacgatcgcc
     4681 acagcatcgc cccggaattc ggccagcccg tgcctgaccg caaatccaaa accattaggc
     4741 ggcggattgt taagatagcg gacccctgga tcttctgcca taagcgtcgc caggcgatgc
     4801 tcggttgcgt cggtgctatt gtcgttgata accaggattt cgtattttat gtcggcgtcg
     4861 cgcagcgcgg acgcgaactg ccggaccgtc tcggtgatgt tcccttcctc attgtgggct
     4921 ggaatcacca ccgacaacat ccccttgacg ccggcggcct gccactcggc aagcgagcga
     4981 acttcgattg gcatggctca atcccccgcc aatttctgtc tcgatccgac gccgtcgatg
     5041 atctcggcca ggatctcgtc gatgccgtag cgatactgcc actgcgggta atccgcctgg
     5101 aaccggcgca cgtccgatat ccaccagatg tggtcgccgg tcctgttctg ttcggcgtac
     5161 ttccagttca tcggccgtcc t
//
LOCUS       DATAVD010001197         2454 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1975898, whole genome shotgun sequence.
ACCESSION   DATAVD010001197 DATAVD010000000
VERSION     DATAVD010001197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2454
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1975898"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..827)
                     /locus_tag="VHX39_22850"
     CDS             complement(<1..827)
                     /locus_tag="VHX39_22850"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3994021.1"
                     /translation="MTILDAQNDLPAFRQAIRDWLAQVVPQDWKAQMIRASNDEYIAF
                     QRWWMAERSKVGLAIPHWPKEYGGAGLTLQHLIAIADEMARADAPQNRVFTISLIHMP
                     GTLLPHGTESQKQRYLSGVAKGEVWCQGFSEPNSGSDLASLRTRAVRDGDHYVINGQK
                     IWSSNSMHADLCLLLTRTDPNAQKHRGITYFIMDMRSHGIEVRPIRQANGRSEFGEIF
                     LTDVRIPAENMIGAENNGWRVAQATLASERGVIAFEGAERQRYEIEAFYREALENDAA
                     "
     gene            complement(830..1930)
                     /locus_tag="VHX39_22855"
     CDS             complement(830..1930)
                     /locus_tag="VHX39_22855"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3994022.1"
                     /translation="MVATEAAGALDQATLEALREGVAGVLAEQSDSTQLHAFIDGKNG
                     LDRELWAQAGSLGWLGFGIPESFGGLGLGCLGLAILHAEFGRQAAPGPFIATLSAAQA
                     LAETDDDAVQKNWLPRLASGEISAAVPASFDAAALTRSGTGVSGKLRCLGSPDAAFVL
                     APAGNGWCIVELAGADVAVAPMWDRTREIIDVHLDNARSTALAADPDATRQSLTRALA
                     LAIAADSAGAARSVTERTIAYMKTREQFGQPIAGFQALKHRAADLATRLAVMDEMVAH
                     AVQQTADDDPDADIWSGLAKSEVTESAVFVTTDCVQLHGGVGFTWDFDPHIFLKRARL
                     NEVLMMSNPALRDRAAARLAAVTTAGRSALEL"
     gene            2122..>2454
                     /locus_tag="VHX39_22860"
     CDS             2122..>2454
                     /locus_tag="VHX39_22860"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3994023.1"
                     /translation="MEIALTPMEFARRARRLYGEREAVVDGDLRLTYAQFLERCDRWS
                     TALQALGVRQGDRVAYIAPNTHAHLEGYYAVPQIGAVLVPINYRLIPDDFEYIINHCG
                     ATVVCAHAD"
BASE COUNT          450 a          764 c          764 g          476 t
ORIGIN      
        1 gctgcatcgt tctccagcgc ctcacgatag aacgcttcga tctcataacg ctgccgttct
       61 gcgccttcga acgcaatcac gccacgctcg gaggccagcg tcgcctgcgc cacgcgccag
      121 ccgttgttct cggcaccgat catgttttcc gcaggaatcc ggacatcggt gaggaagatc
      181 tcgccgaact ccgagcggcc attggcctga cggattggcc gcacctcgat gccgtgcgag
      241 cgcatgtcca tgatgaaata ggtgatgccg cgatgtttct gtgcgttcgg gtcggtgcgg
      301 gtcagcaaca ggcagagatc ggcatgcatt gaattggacg accagatctt ttgcccgtta
      361 atgacgtaat gatcgccatc cctcacggcc cgggtgcgca acgacgccag gtcggaaccc
      421 gagttgggct cagaaaatcc ctggcaccag acttcgcctt ttgccacgcc cgacagatat
      481 cgctgcttct gcgattccgt tccgtgcggt agcagcgtgc cgggcatatg gatcaacgaa
      541 atggtgaaca cacggttctg cggcgcgtcg gcgcgtgcca tctcgtcggc aatggcgatc
      601 agatgctgca acgtcagacc ggcgccgccg tattcctttg gccagtgtgg aatggccagg
      661 ccgaccttgc tccgttctgc catccaccag cgctggaatg cgatatattc atcgttcgag
      721 gcccggatca tctgagcttt ccagtcttgc ggcacaacct gcgccagcca gtcgcggatt
      781 gcctgacgga acgccggcag atcgttttgc gcgtccagaa tggtcatggt cacagctcca
      841 acgccgaccg tcctgcggtc gtaacggcgg ccaacctggc ggcggcccgg tcgcgcaagg
      901 cgggattgct catcatcagc acttcgttca gtcgtgcacg tttgaggaag atgtgtggat
      961 cgaagtccca ggtaaagccg acgccgccgt gaagctgaac gcaatcggtg gtgacgaaaa
     1021 cggcggactc ggtcacctcc gatttggcaa gtccggacca gatgtccgcg tccgggtcgt
     1081 cgtcggcggt ttgctgaacc gcgtgcgcca ccatttcgtc catgacggcg agcctggtag
     1141 caaggtcagc ggcccgatgc ttgagcgcct ggaaccctgc gatcggctgt ccgaactgct
     1201 cccgcgtttt catgtaggcg atggtccgtt cggtgaccga acgggctgcg ccggcactgt
     1261 cggcggcgat ggcgagtgcc agggctcgcg tcagcgactg cctggtcgcg tccggatcgg
     1321 ctgcgagtgc tgtggaccgc gcgttgtcca gatgaacgtc gatgatctcg cgcgtccggt
     1381 cccacatcgg tgcgacggca acgtccgcgc cggccagttc gacaatgcac cagccattgc
     1441 cggcgggcgc gagaacgaaa gcagcgtctg gtgaacccag gcagcgcaac ttgccggata
     1501 cgccggtgcc ggagcgggtc agcgccgccg cgtcgaagga agccggcacg gcagcgctga
     1561 tctctccgga tgcgaggcgt ggcagccagt tcttttgcac cgcatcgtca tcggtttcgg
     1621 caagcgcctg cgccgccgac agggtggcaa tgaagggtcc cggagcggcc tggcggccaa
     1681 attcggcgtg aaggatcgca aggcccaggc aacccagacc gaggccgccg aatgactcgg
     1741 gaatgccgaa acccagccag ccaagcgaac cggcctgagc ccatagctct cggtcgaggc
     1801 cattcttgcc gtcgatgaac gcgtgcaatt gcgtgctgtc gctttgttcc gccagcacgc
     1861 cggcaacgcc ttctcgtaat gcctccagcg ttgcctgatc cagcgcaccc gctgcctcgg
     1921 tcgctaccat ggagtctcca gtgcttggtc ttttgaaacc gtttcctctg ctcggatatg
     1981 atagagagtt tggctccgat cgggaaaccg gcgcaaacga cgtgggagga atgacgccgc
     2041 gaaagccgct ggcaattcct ccccggcaat gcaacattcc gcggttcata acgagaaatt
     2101 tggtcggagg agcgtcatac catggaaatc gccctgaccc cgatggagtt cgcccgccgt
     2161 gcacgccggc tgtacggcga gcgcgaagcg gtcgtcgatg gtgatctgcg attgacttat
     2221 gcacaattcc tggaacggtg cgaccgctgg tcgacggcgt tgcaggccct cggcgtgcgt
     2281 cagggcgatc gggtcgccta catcgcgccc aacactcatg cgcatttgga gggatattat
     2341 gctgtcccgc aaatcggcgc ggtgctggta ccgatcaatt atcggctgat cccagacgac
     2401 ttcgaataca tcatcaacca ttgcggggcg acggtcgtat gcgctcatgc cgac
//
LOCUS       DATAVD010001198         4232 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1975951, whole genome shotgun sequence.
ACCESSION   DATAVD010001198 DATAVD010000000
VERSION     DATAVD010001198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4232
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1975951"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..771)
                     /locus_tag="VHX39_22865"
     CDS             complement(<1..771)
                     /locus_tag="VHX39_22865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994024.1"
                     /translation="MALAPHYTQTGTSPAVVGAGSGLFPCSCGQSLLIAGYEPQNFLA
                     IAIQCASCGRISETPGLPIGAPAPANVTLVERGTDNPPTRVTADTVLISREESERLAA
                     LYEPRPTGSDSHVISDALLDDVEFQQRRWTNAPLDPTPGSYKQQPLAWAVAHFRARLR
                     DPDWVSFSDNSDMVAMVVIAAFRDLFASWEHHPLFGAMAGTAAAQGFSLHGMAMFGAA
                     KSLTSAGNRVACVPSEGSTPHIASLQLILGPQDQMAVAV"
     gene            complement(775..1344)
                     /locus_tag="VHX39_22870"
     CDS             complement(775..1344)
                     /locus_tag="VHX39_22870"
                     /inference="COORDINATES: protein motif:HMM:NF022679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3035 domain-containing protein"
                     /protein_id="HEX3994025.1"
                     /translation="MSHLSTPIRLIAPATVIVLLGGCSAGGLSRTFGLTRDAPDEFTV
                     VTRAPLSMPPDFTLRPPQPGVARPQEQSDRSLAESALVPEAALGGPAVGMTAGQAALV
                     RDAGGGAPADIRQRVDQEARLDTSNDSFIDRLLYWRKPDSQHAVVDPTQESKRLRDNA
                     AMGQSPENGDTPIIREKKTGWFQDLFSWL"
     gene            1493..2068
                     /locus_tag="VHX39_22875"
     CDS             1493..2068
                     /locus_tag="VHX39_22875"
                     /inference="COORDINATES: protein motif:HMM:NF025595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4337 family protein"
                     /protein_id="HEX3994026.1"
                     /translation="MDPVETAQAQIEKAHESHDEDDNWPRWMAVAVSCLAASLALADL
                     GAKSSQTAYLTHNITASDTWNAYQGKNLRANLWNTQATMLESLPNAADPAIQQRIKTA
                     QAEAGRMRDEPASGDGMKQLAEKAKDQEQDRELAFHAYHGFEYTSSALEISIVLASVS
                     VVTRVHALGVVAAGIGLLAAGYGLAVFAHFV"
     gene            complement(2116..2532)
                     /locus_tag="VHX39_22880"
     CDS             complement(2116..2532)
                     /locus_tag="VHX39_22880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3994027.1"
                     /translation="MTVLRSSDRETKRQPEANFSGVVFSDEIVQGSAPSRMRASVVSF
                     TPGGRTAWHSHPVGQTLYCLSGAGRIQFEGQQVQEIRAGDTVIIPPNTRHWHGAAPDK
                     LFSHLAMSEQTDKGEGTAWFEKVSDKDYSAATAPIT"
     gene            complement(2555..3721)
                     /locus_tag="VHX39_22885"
     CDS             complement(2555..3721)
                     /locus_tag="VHX39_22885"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3994028.1"
                     /translation="MDFALTEPQQQIRDQILRICARFDDTYWLERDRDAVFPHAFFNA
                     MAEGNWLGIAMPEAYGGAGLGITEAAVMMQAVAESGAAMSGASAIHINIFGLNPVIVY
                     GTDAQKSRMLPPLIAGRDKACFGVTEPNAGLNTTAMTTRAELNGDHYRINGTKIWTST
                     AQVANKILLLARTTPIDKVKRKTQGLTLFYTDLDKAHAEVRLIHKMGRHAVDSNMVFF
                     EDMRVPIEDRIGEEGEGFRAIIHGLNPERCLVAAEAVGIGRAALARASRYARERIVFG
                     RPIGQNQAIQHPLARNWAELEAANLMTLKATWLYDTGQECGAEANAAKYLAGEAGYHA
                     AEQAVMTLGGMGYAQEYHVERLFRESLIPRIAPVSRELILSYLAERVLDQPKSY"
     gene            3846..>4232
                     /locus_tag="VHX39_22890"
     CDS             3846..>4232
                     /locus_tag="VHX39_22890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013641306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF29 domain-containing protein"
                     /protein_id="HEX3994029.1"
                     /translation="MSTKNATLYDTDFYAWTAEQAALLRAGRLSEADVENIAEEIESM
                     GRSERRELVSRLSVLLLHLLKWRYQPGFRGNSWRLSIEEQRLQLLDHLNENPSLKSQL
                     DNLMRSAYRSGRLQAEKETGLERATFP"
BASE COUNT          775 a         1273 c         1387 g          797 t
ORIGIN      
        1 caccgcgact gccatctgat cctgcggccc cagtatcagt tgcaacgacg caatatgcgg
       61 tgtggagccc tcggagggca cgcaagccac ccggttgcct gctgaggtca gcgacttcgc
      121 cgcaccgaac atcgccatcc catgcagcga aaatccctgg gcggcagcgg tcccggccat
      181 tgccccgaac aacggatgat gctcccaact ggcgaacagg tcgcgaaacg ccgcgatcac
      241 caccatggcg accatgtccg agttatccga aaaactcacc cagtccggat cgcgcagccg
      301 cgcccggaaa tgtgcgaccg cccatgcaag cggttgttgt ttgtagctcc cgggtgtggg
      361 gtcaagcggc gcgttggtcc agcgccgctg ctgaaattcc acatcgtcga gtagcgcatc
      421 gctgattacg tgggaatcgc tgcccgtcgg ccggggttcg tagagcgctg cgagacgttc
      481 gctttcctcg cggctgatca ggaccgtatc tgcagtcacc cgggttgggg gattgtctgt
      541 cccacgctcg accaaggtca cgttggccgg cgccggcgcc cctatcggca gtcctggggt
      601 ttcggaaatc ctgccgcagc tggcacactg gatcgcgatg gcgagaaaat tctgcggctc
      661 ataaccggca atcagcaaag actgcccgca gctacagggg aacaggccag agccggcgcc
      721 aacgacggcg ggtgacgtcc cggtctgcgt gtaatgtggg gccagcgcca ccggctacag
      781 ccagctgaac aggtcctgga accagccggt ctttttttcg cggatgatcg gcgtgtcgcc
      841 gttctccgga gactggccca tcgcggcgtt gtcgcgcaga cgcttcgatt cctgagtcgg
      901 gtccaccacg gcgtgctggc tatcgggttt acgccaatac aacaaccgat cgatgaagct
      961 gtcgttgctg gtgtcgagtc gggcctcctg atcgacccgc tggcgaatat cagccggggc
     1021 gccgccgccc gcgtcgcgca ccaaggccgc ctgcccggcg gtcatgccaa ccgccggacc
     1081 gcccagagcg gcctccggca caagagcgga ttcagccagc gaacggtccg attgctcctg
     1141 cgggcgcgcc acaccgggct gcggtgggcg cagggtgaaa tccggcggca tcgacaacgg
     1201 cgcgcgggtc accacggtga attcgtcagg cgcatcgcgc gtcagcccga atgtccgcga
     1261 caagccaccg gcgctgcaac cacccaacaa gacgatgaca gttgctggtg cgatcagtcg
     1321 tattggggtg gacaagtggc tcatggcccg gcttttactc tgtcccgtgc gcgcggcgca
     1381 agacgtacac cgcgaccgat tccgctgcgg tgcgctggtt tggccgtcgt tggcctcacg
     1441 ttgcgatcgg ccatagcctg cggccggcaa accaaggggg gaactggcag tggtggatcc
     1501 ggtcgaaaca gcgcaagcgc agattgagaa agcgcacgag tcgcatgacg aagacgataa
     1561 ttggccaagg tggatggcag tcgcggtttc ctgtctggcg gccagcctgg cgttggccga
     1621 ccttggagcg aagtcgtcgc agactgccta tctgacgcac aacataacgg cgtccgatac
     1681 atggaatgcc tatcagggca agaaccttcg cgcgaatctg tggaacaccc aggccacgat
     1741 gctggagagc ctgcctaatg ctgccgatcc ggcgatccag cagcgcatca aaacagcgca
     1801 ggcggaagcc gggagaatgc gcgacgagcc ggccagcggc gacggcatga agcaattggc
     1861 cgagaaagcg aaagaccagg aacaggaccg cgaactggcg ttccacgctt accacggctt
     1921 cgagtacacc tcgagcgcgt tggagatttc gatcgtgctg gcctcggttt ccgtcgttac
     1981 ccgggtccat gcccttggcg tggtggcggc cgggattggt ctgctcgcgg ctggctatgg
     2041 gctggcggtg tttgctcact ttgtctgagc gacacggcgc gcgcggattg agagcacgcg
     2101 ccgcagcgcg gtggatcagg tgatcggcgc agtcgctgcg ctatagtcct tgtccgaaac
     2161 tttttcgaac cacgcggtgc cctcgccttt gtcggtttgt tctgacatcg caagatgcga
     2221 gaacagtttg tccggtgccg caccgtgcca gtggcgggtg ttcggcggaa tgatcacggt
     2281 atcgccggcg cggatttcct gcacctgctg accttcgaac tgaatgcggc cggcgccaga
     2341 caggcagtac aaggtttgcc caaccgggtg cgagtgccag gcggtgcggc cacccggggt
     2401 gaacgacacc acggacgcgc gcatgcgcga cggcgccgac ccctgcacga tctcgtcgga
     2461 gaacacgacg ccggagaagt tggcttccgg ttgtctcttg gtctcgcgat cagaagagcg
     2521 gagaactgtc atacgatggt ttccttcctt gcggttagta agacttcggt tggtcgagca
     2581 cgcgctcggc cagatagctc aggatcagct cgcggctgac cggagcgata cgcgggatca
     2641 ggctttcccg gaataaccgt tcgacgtgat attcctgtgc gtaacccatg ccgccgaggg
     2701 tcattaccgc ctgctcggcc gcatgataac cggcctcgcc agccagatat ttcgcggcat
     2761 ttgcctccgc gccgcactcc tggccggtgt cgtacagcca cgtcgccttc agtgtcatca
     2821 ggttggcggc ttccagttca gcccagttgc gggcgagcgg gtgttggatg gcctgatttt
     2881 ggccgatcgg gcggccgaag acgatgcgtt cgcgggcgta acgggaggcg cgtgccagag
     2941 cagcccgccc aatgccgacg gcttccgcgg cgacgaggca acgttccggg ttcaaaccat
     3001 ggatgatggc acggaagccc tcgccttctt cgccgatgcg gtcttcaatt gggactcgca
     3061 tgtcttcgaa gaacaccatg ttgctgtcga cggcgtggcg gcccattttg tggatcagcc
     3121 ggacctcggc atgggctttg tcgaggtcgg tatagaacaa ggtcaggcct tgggttttgc
     3181 gtttgacctt gtcgatcggc gtggtgcgcg cgagcagcag gattttgttg gcgacctgcg
     3241 cggtggaggt ccagatcttg gtgccgttga tgcggtaatg atcgccattc agctccgctc
     3301 gcgtggtcat tgctgttgtg ttgaggcccg cgttcggttc ggtcacgcca aaacaggctt
     3361 tgtcgcggcc ggcgatcagc ggcggcagca tgcgggattt ctgcgcgtcg gtgccgtaca
     3421 cgatcaccgg attgaggccg aaaatgttga tgtggatggc gctggcaccg ctcatggcgg
     3481 caccggattc ggcaaccgcc tgcatcatca ccgccgcttc ggtgatgccg aggccggcac
     3541 cgccgtaagc ctccggcatg gctatgccga gccagttgcc ctcggccatg gcgttgaaga
     3601 aagcgtgcgg gaagacggcg tcgcggtccc gctccagcca gtacgtgtcg tcgaaccggg
     3661 cacaaatccg caggatctgg tcgcggattt gttgctgagg ctcggtcagg gcgaagtcca
     3721 tggggcggat ctttccggga cggatggctg agcggcgatt atagcaacac ggtggggtgg
     3781 gcggaaaccg ggtgacggta cggcgggaat ggcgtaggat tgcagggttg atggtgctcc
     3841 gatccatgtc gacgaaaaac gcgaccctct atgacacgga cttctatgcc tggactgctg
     3901 agcaagcggc tctgctgcgc gctggccggt tgtccgaggc cgatgtcgag aacatcgcgg
     3961 aagagatcga aagtatggga cgcagtgaac ggcgcgaact ggtcagccga ctttccgtcc
     4021 ttctgcttca tctgctcaaa tggcgatacc agccgggctt tcgaggaaac agctggcgac
     4081 tgagtatcga agagcaacgg ttacagctac tcgatcacct taacgaaaat ccgagcctga
     4141 aatctcagct cgacaacctg atgcgaagcg cataccggtc cggccgcttg caagcggaga
     4201 aggagacggg ccttgagcgc gccaccttcc cc
//
LOCUS       DATAVD010001199         3250 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_674979, whole genome shotgun sequence.
ACCESSION   DATAVD010001199 DATAVD010000000
VERSION     DATAVD010001199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3250
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_674979"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..790)
                     /locus_tag="VHX39_22895"
     CDS             complement(<1..790)
                     /locus_tag="VHX39_22895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007092361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HEX3994030.1"
                     /translation="MREQPTRDQPPRDKPWIFRTYAGHSTAAASNALYRNNLSKGQTG
                     LSVAFDLPTQTGYDSDHPLAKGEVGKVGVPICHLGDMRALFDGIPLGAMNTSMTINAT
                     AAWLLALYIALADEQGVPRATLQGTTQNDIIKEYLSRGTYVFTPAPSLRLTTDMILFT
                     TTAMPKWNPINVCSYHLQEAGATPVQELAFALATAVGVLDAVKASGQCAPEQFGEVVG
                     RISFFVNAGLRFVTELCKMRAFTELWDEITRERYGVRDPKHRLFR"
     gene            complement(914..1750)
                     /locus_tag="VHX39_22900"
     CDS             complement(914..1750)
                     /locus_tag="VHX39_22900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX3994031.1"
                     /translation="MIRMFVLLLSLAIAGNARADMFLTLDATRSTQLSGLLDYLLPIF
                     KAASNLSVHVVTLDAGQAVAVAERGDADALLLNDRRVEDQLLADGHGVNLRDAMYDDF
                     VIVGPRSDPAGIRGVPYASKALAQIAAKRALFASPGDDSGAHQMELRLWKSADIQPNT
                     KSAWYRVAGQSMETTLSLAAATNAYTLADRASWAGFRNRQNLEVLVERDPLLFNVYGS
                     MLISPAKWPQVKITFARIWHDWLTDKHGFAAITSYQINGEQIFFPCQGLDVGLCRSVS
                     AR"
     gene            2072..>3250
                     /locus_tag="VHX39_22905"
     CDS             2072..>3250
                     /locus_tag="VHX39_22905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994032.1"
                     /translation="MTDIACGAASAHARKSNKRRLLDIGIVGLLGAGLIATASAAQAA
                     NAGISQVTILSSGPAFGGCSIGNVGTFTVIKGYALDLIDPADSHNTDITDIALAPKDA
                     NGYVNLLLSFYMTVPSNLANGNGKIVADIPNRGNVEIASPNRSAGGNAYGSSATNCNG
                     TTGTGTFWWPQGYSIVDAGWEYAGDPTSAANTSLSASGVVLPVNGTPVATTTMPIAMN
                     AGNTTITGPGYEYIVATGPTGATNGTGTTTYVLGGVSTPSYPATPLGGANSCSGNGVL
                     THRKHLDDTPTVLDPSDWQYNIGSDGNCDSISLLTTGSGPGTYYSACTASTGGNVATG
                     ACFIGQDIYELSYTAANPTVNGLGVIAIRDFYSWLKGNSGTAAQSNNPFSPGYIQELY
                     T"
BASE COUNT          674 a          980 c          983 g          613 t
ORIGIN      
        1 agcggaacag ccggtgcttg ggatcgcgca cgccgtaacg ctcgcgcgtg atctcgtccc
       61 acagctcggt gaaagcgcgc atcttgcaga gttcggtgac gaaacgcagg ccggcattga
      121 cgaagaagga gatgcgtccg accacctcgc cgaattgctc cggcgcgcat tggcccgacg
      181 ccttcaccgc atcgagcaca ccgacggcgg tggcgagcgc gaaggcaagc tcctgcaccg
      241 gcgtcgcgcc cgcttcctgc aggtgatagg agcagacgtt gatcggattc cacttcggca
      301 tcgccgtggt ggtgaacagg atcatgtccg tggtcagccg cagcgacggc gcgggcgtaa
      361 acacgtaggt gccgcgcgac agatattcct tgatgatgtc gttctgggtg gtgccttgca
      421 gggtcgcgcg cggcacgccc tgctcgtcgg cgagcgcaat atagagcgcc aacagccacg
      481 ccgcggtggc gttgatggtc atcgaggtgt tcatggcgcc gagcgggatg ccgtcgaaca
      541 aggcgcgcat gtcgcccaaa tggcagatcg gcacgccgac cttgccgact tcgcccttgg
      601 ccagcggatg atcgctgtca tagccggtct gggtcggcag atcgaacgcg accgagagcc
      661 cggtttggcc cttgctcaga ttgttgcgat agagcgcgtt cgaggccgcc gcggtcgaat
      721 gccccgcata ggtgcggaaa atccacggct tgtcgcgcgg gggctggtcg cgggttggct
      781 gttcgcgcat cgctgtcgca tctggtccgg cccggccagt gtcgtgccga atttgctgca
      841 atgcaacgtc acggcgcgcc cgcacgacgt cgccaccgca atcgtctccg ggatctcggc
      901 cagcgccgac ggattaccgt gcggacacgc tccggcaaag cccaacgtcc aagccttggc
      961 acggaaagaa gatttgttcg ccgttgatct ggtatgacgt aatcgcggca aagccgtgct
     1021 tgtcggtgag ccagtcgtgc cagatccgcg cgaaagttat ttttacttgc ggccacttgg
     1081 cggggctgat gagcatgctg ccatagacgt tgaacaaaag cgggtcgcgt tcgaccagga
     1141 cttcaagatt ctgccgattc ctgaaaccag cccaggaggc ccgatcggca agcgtgtagg
     1201 cgttggtcgc ggcggcgagg ctcagcgttg tttccatgct ctgccccgca acgcgatacc
     1261 aggcggactt cgtattgggc tggatatcgg cggatttcca aagtcgaagc tccatttgat
     1321 gcgcgccgct gtcatcgcca gggctcgcaa ataatgcacg cttcgcggca atttgcgcca
     1381 atgccttgct cgcatagggc acgccgcgga tacctgccgg atcggagcgc ggtccgacaa
     1441 tcacgaaatc atcgtacata gcgtcgcgca gattgacgcc gtgaccatcg gcaagaagct
     1501 ggtcctctac gcgccggtca ttaagcagca acgcatcggc atcgccgcgt tcggcaacgg
     1561 cgactgcttg gccggcatcg agcgtgacga cgtgcacgct caaattagat gcggctttga
     1621 agatcggtag cagataatcg agcaggccgg aaagctgggt cgatctcgtc gcgtccaagg
     1681 tcaagaacat atccgcacga gcattgccag ctatagcgag cgaaagaaga agaacaaaca
     1741 tcctgatcat tgctcacgcc tgcgtatttg ccatggtgat cacaccatgt cgcgatgcac
     1801 gcgtcaaaac ggctttggcg acgaatagct acaatcatag cgtgtcggac tgcgtgtccg
     1861 gcagtctcga cacgaaagat tgagcctttg ctgcaatgag ttacgtacat tgcagctctg
     1921 catagcgttt ttgtttacag gccgagatac ttccgttacg gtttaaagcg gcaacctagg
     1981 ggcaatctag gcaaaatagt ttacttgcac tgttcgtaat ttcagccgac cgcgcaaagc
     2041 ggacgggata cagctctatt gggaggaagt catgaccgac atcgcatgcg gtgcggcgtc
     2101 agctcacgcg cgcaaatcaa acaaacgcag attgttggac atcggcattg tcggcctcct
     2161 cggggctggc ctgattgcaa ccgcctctgc ggcgcaggcg gcgaacgccg gcatcagtca
     2221 agtgacgatt ctgagcagcg gccccgcatt cgggggctgt tcgattggca atgtcgggac
     2281 tttcacggtc atcaagggct atgccctcga cctgattgat ccggcggatt cgcacaatac
     2341 cgacatcacc gacatcgcgc tcgcgccgaa agacgccaac ggctacgtca acctgctctt
     2401 aagcttctat atgacggttc ccagcaacct cgcaaacggc aacggcaaga tcgttgccga
     2461 tattcccaat cgcggcaacg tagaaatcgc ctcgccaaac cgttcggccg gcggcaatgc
     2521 ctatggatcg tccgctacga actgcaacgg taccacaggc acgggcacct tctggtggcc
     2581 gcagggctac tcgatcgtag acgccggctg ggaatatgcc ggggatccga cgtcagccgc
     2641 caacacgtcc ttgtcggctt ccggtgtggt gttgccggtc aatggtacgc cggttgcgac
     2701 cacaacgatg ccgatcgcca tgaacgccgg caacacgacg atcaccggcc cgggctacga
     2761 atacatcgtg gcaacgggcc cgactggggc aacgaacggc acgggcacca ccacctacgt
     2821 attagggggc gtgtcgacgc cctcctaccc agctacgccg cttggcggcg cgaacagctg
     2881 cagcggcaac ggggtattga cccatcgcaa acatctggat gacacaccga ctgtgctgga
     2941 tccgagcgat tggcaataca acatcggttc cgacgggaac tgcgactcga tctcattgct
     3001 gacgaccggg agtggcccgg ggacgtacta cagcgcatgc accgcctcca ccggcggaaa
     3061 tgtcgcgacc ggcgcgtgct tcatcggaca agacatctac gagttgtcat acaccgcagc
     3121 gaacccgact gtgaacgggt taggagtgat cgccatccgc gacttctatt cgtggctgaa
     3181 gggtaattcc ggcacggcag cgcaatcgaa caacccattc tctccgggct acatccagga
     3241 gctctacacc
//
LOCUS       DATAVD010001200         2692 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3276910, whole genome shotgun sequence.
ACCESSION   DATAVD010001200 DATAVD010000000
VERSION     DATAVD010001200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2692
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3276910"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1127
                     /locus_tag="VHX39_22910"
     CDS             <1..1127
                     /locus_tag="VHX39_22910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994033.1"
                     /translation="TRLQNVMQTAMAPAPIPAPMVPPAPPPIARSLRKTGAASEMAPP
                     SEAAQADETAEETIFTLVQPVDLAAGHTANVPIVDRDFPAPRIDLVPFRQTHPLAAVR
                     IHNDDTRSLPAGVLTLYDRGGGASFAGDARLGGLPAGETRLLSFAQDLRTTIDTKLSP
                     QPDTFVSFSVADGVLTYTVRTRQVIHIALTAPAKESRDLLLEIPRANGDETLTLEDPK
                     LHVTEQTATAFRVALTLAPGETRTVTAWLDRPEQRNEALLEGDDDVLQAVIGADKLNP
                     TGRAALSHVLDLRRDEARKQAEVTKQRALLSDVEQNEDRLRKNLAAVTTADPLRARLT
                     KALDADETRIDQLRTAIDQAQTAADTSHRALTDAVGSLHI"
     gene            1140..1562
                     /locus_tag="VHX39_22915"
     CDS             1140..1562
                     /locus_tag="VHX39_22915"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX3994034.1"
                     /translation="MPPSIEDRFGINDLFVRYTTALDAGDVETIVGCFTEDGALESPV
                     VGKYAGRAGIRAFSERFAKMNGRGVQLRHVISNLAMSVDGDTAQATCYLTNIITMDGK
                     SQLMPPGRYECELRKVGGEWLFQNRLVILDAPFALPGI"
     gene            complement(1564..>2692)
                     /locus_tag="VHX39_22920"
     CDS             complement(1564..>2692)
                     /locus_tag="VHX39_22920"
                     /inference="COORDINATES: protein motif:HMM:NF013715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEX3994035.1"
                     /translation="MLFTYPLMAAIQEISARIGRVTGVGIAGNIRAHYPRWVSSVIVL
                     LLLVANIINLGADLGAMGDALVLLIGGSAHVYVVGFAVGCVLLEIWSRYHNYVAILKW
                     VSVTLLAYVATALAVQVPWQEVTWNTIVPNFSLQTDYVVAIVAVLGTTITPYCFFWQS
                     SEEAEDERIDPHAHTLIEAPEEARSQIKRMRIDTYVGMGYSNLISWFIIVTTAATLHA
                     HGVTNITTSAQAAEALRPIAGPLTFFVFAAGIIGIGLLAIPVLAGSSAYALGEALGWT
                     TGLAREPLDAKAFYGAIAAATLIGICFNFVGIDPIMALFWCAVINGVVAVPLMVVMMI
                     MAMQPSVMGRFVLPRPLWAMGWLCTGAMAVAVAIMFATWGH"
BASE COUNT          570 a          896 c          772 g          454 t
ORIGIN      
        1 acacgcgcct gcaaaacgtg atgcaaaccg cgatggcgcc cgctcccata ccagcgccca
       61 tggttccccc tgccccaccc ccgatcgcgc gttcacttcg gaagacaggc gcagcctccg
      121 agatggcgcc accgtccgag gccgcacagg ccgatgaaac ggccgaagaa acgatcttca
      181 cgctggttca gccggtggac cttgctgccg gtcataccgc gaacgttccg attgtcgacc
      241 gtgattttcc ggccccaagg atcgatttgg ttccattccg gcaaacccac ccgctggccg
      301 cggtgcgcat tcataatgat gacacacgca gtctgcctgc cggggtgctg acgctttacg
      361 atcggggcgg cggcgcgagt ttcgccgggg atgcccgtct cggcggcctg cccgcaggtg
      421 agacccgcct gctgtccttc gcgcaggacc ttcgtacgac aatcgatacg aagctatcgc
      481 cgcaacctga tacgttcgtc tcgttcagcg tcgcggacgg cgtgctgacc tatacggtgc
      541 ggacccgcca ggtgatccat atcgccctca ccgctcccgc caaggaatcc cgcgacctgc
      601 tgcttgaaat tcccagagcg aatggcgacg agactttgac tctggaggac ccgaaacttc
      661 atgtgaccga gcaaaccgcg accgcttttc gtgttgcgct gaccctcgcg ccgggtgaaa
      721 cccgcactgt caccgcctgg ctcgaccgac ccgagcaacg taatgaggca ctcctggaag
      781 gcgatgacga cgtcctgcag gcagtcatcg gcgcggataa gctgaacccc accggccgcg
      841 ccgctttgag tcacgtgctg gacctgcgcc gcgatgaggc acgcaagcag gccgaggtca
      901 caaagcaacg cgcgctgctg tccgacgtcg agcagaatga ggaccggctc cgcaaaaatc
      961 tcgccgccgt cacgactgcg gacccgctgc gcgcccgtct gaccaaggcg ctcgacgccg
     1021 acgaaaccag gatcgatcaa ctgcggaccg ccatcgacca ggcgcagacg gcagccgaca
     1081 cgagccatcg cgcactgacc gacgccgtcg gcagtctgca catctgacag gagccagtca
     1141 tgcctccgtc catcgaagac cgttttggca tcaacgatct gttcgtgcgc tacacgaccg
     1201 ccctggatgc cggcgacgtc gaaacgatcg tcggctgctt caccgaggat ggtgcgctgg
     1261 aaagcccggt cgtcggtaag tatgcgggcc gtgccggtat ccgcgctttc tccgaacggt
     1321 ttgccaaaat gaacggccgg ggcgtgcagc tgcgccatgt catttcgaac ctggcgatga
     1381 gcgtggacgg cgatactgcg caggccacct gttacctcac caacatcatc acgatggacg
     1441 gcaaaagtca gctgatgccg ccgggccgtt atgagtgcga attgcgcaag gtgggcgggg
     1501 aatggctatt ccagaaccgg ctggtgattc tggacgcgcc gttcgccctg ccggggattt
     1561 aactcaatgt ccccaggtcg cgaacatgat tgcgactgcc accgccatcg cgccggtgca
     1621 cagccagccc atcgcccata gcggtctggg cagcacgaac cgccccatca cgcttggttg
     1681 catggccata atcatcatca cgaccatcaa cggcaccgcg accacgccgt tgatcactgc
     1741 gcaccagaac agcgccatga tgggatcgat accaacgaaa ttgaagcaga tgccgatcaa
     1801 cgtcgccgcc gcgatcgccc cgtaaaacgc tttggcgtcc aaaggctcgc gtgccagccc
     1861 cgttgtccag cccaacgcct cacccagcgc ataggccgat gatccggcga gcaccgggat
     1921 cgccagcagt ccaattccga tgatcccggc agcgaacaca aaaaacgtaa gtggtccggc
     1981 gatcggccgc agcgcctcgg ccgcctgggc cgaggttgtg atgttggtaa cgccatgggc
     2041 gtgcagcgtt gccgcggtcg tcacgatgat gaaccaactg atcaggttgg aataacccat
     2101 cccgacatag gtatcgatcc gcatccgttt gatctgcgac cgcgcctcct ccggcgcttc
     2161 gatcagggtg tgggcatgcg ggtcgatccg ctcgtcctca gcctcctccg aggattgcca
     2221 gaaaaagcaa tagggcgtga tggtagtgcc aagcacggca acgatcgcca cgacataatc
     2281 ggtctgcaac gagaaattcg gcacgattgt gttccaggtc acctcctgcc acggcacctg
     2341 cacagccagc gcggtggcca cataggcgag caaagtcaca gacacccact tcaatatggc
     2401 aacgtaatta tgatagcgtg accagatctc caacaacacg cagccgaccg cgaatccgac
     2461 cacgtaaaca tgggcagacc cgccgatcag cagtaccaac gcatcgccca tcgcgccaag
     2521 gtcagcgcca agattgataa tgttggcgac cagcaacaac aacacgatga ccgaactcac
     2581 ccatcgcgga taatgggcac ggatgttgcc ggcaatgccc acgccggtga cccgaccgat
     2641 tcgggcgctg atttcctgga tcgcggccat cagcgggtag gtgaacagca tt
//
LOCUS       DATAVD010001201         7076 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1976218, whole genome shotgun sequence.
ACCESSION   DATAVD010001201 DATAVD010000000
VERSION     DATAVD010001201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7076
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1976218"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..614)
                     /locus_tag="VHX39_22925"
     CDS             complement(72..614)
                     /locus_tag="VHX39_22925"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEX3994036.1"
                     /translation="MTNPYVTLSSRIAYENRWTRVREDRIRRPDGSDGLYGVVERADF
                     VVIVPWQDGCLTLVEQYRYPVSARVWEFPMGMWEQAPGTDPLVLAAAELREETGLAAG
                     RMTRVGEIFQGPGYCNQRGHIYLATDLIQGEPDRETTEQDMISRPFALADFEAMIRDG
                     TVREAMTLAAFGLLRVKGLL"
     gene            1044..2483
                     /locus_tag="VHX39_22930"
     CDS             1044..2483
                     /locus_tag="VHX39_22930"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994037.1"
                     /translation="MQDPASGAASAQPDSFDRNAGGGDTGRIAARIDRLPLTWTQWRL
                     ALITQIFWGVIIAADGIPAKLYPFIWGPRHSFGTTAFSVLLAVQFGVGILVGEYLIGI
                     LADRAGRRTALLVSSLAVALPLWPTALTDNFGLLLLFFGLSSVGMGGVLATNVVYMGE
                     IVPPAERGRVMLASQILAVLVFGILGNVPGIFWVPLHYQWFIYLFTAVPLLVLVPLAL
                     WGMPESPRWLEAHGHHADAERIMARLEADCLRRSGLAALPEPDYAGYAVPVNKHVPMG
                     ELFRGEYGQRTVLLLVAWIIGYAGLVYGFTGYLPVLLRSFGFSASATFGALLVASVGG
                     GCLGLAICSLIGEAVERRTSIVVSAVLFCAAMFGLYFNHGLVAAYVLSAVAWGMMMVW
                     LFNMYNYTASAYPTRLRATGVGLTDGLGHLGSIFGPVIAGALFASTAFAGHAGWYIYV
                     TIPGALVPAALIGWRGISQQRAILEQISG"
     gene            complement(2511..3206)
                     /locus_tag="VHX39_22935"
     CDS             complement(2511..3206)
                     /locus_tag="VHX39_22935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994038.1"
                     /translation="MAKLQQITVTLAPATLVALRELGYALYVMRAFDTTNAAGKPLVW
                     LTTTQFLENTTIAFEMKFQVYVSTSKVVANGIITVFTAAPVELGQTAAIDTGGTLTVT
                     QGGNPTGVTILNKGTTPYTAGLAVQANDDFLSPIFAEPLHGLAEDIAAPREQFLLTFT
                     TQGVAAGTLIGHAMSQSLLGDLAGADQQTVAFDIDTGWNAGGASWATPVPAGADLTPV
                     LVHEKPLEARRRS"
     gene            complement(3570..4682)
                     /locus_tag="VHX39_22940"
     CDS             complement(3570..4682)
                     /locus_tag="VHX39_22940"
                     /inference="COORDINATES: protein motif:HMM:NF005071.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3994039.1"
                     /translation="MRFHAVLVAAIVGLAAPALAQESGGKVDPAAWPGYQTGDYVIKD
                     YKFVSGETLPELKLHYRTIGTAGKNTEGEIINGVLLLQGNTGTGDNWFRPTLANELFK
                     PGQPLDPAKYYIIMPDALGRGGSSKPSDGLKGKFPHYRYHDMVDVTHRLLTDGLKVAH
                     LRLVIGSSLGCMQQFLWAEWYPGLMDGTVGMSCQPIQISGRNYMLRHGTAESIRHDPA
                     WNNGNYDKGPTLYRYSSAGNDLTDSPVRIQEEAPTMEAAKALYDKRLAAMMKNGDANN
                     TLYEIESIYDYNPEPDLPKIKAHVLLINNVEDFADPPTLGTIEGAFKKIAHGTYVLTP
                     YGKDTHGHFTHYYAGVWKPYLVKFMAGLPPAPKAAP"
     gene            5006..6580
                     /locus_tag="VHX39_22945"
     CDS             5006..6580
                     /locus_tag="VHX39_22945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3994040.1"
                     /translation="MIKRRSVLAGTAASATVGLARPSLAQGAKVLKYVPQANLANPDP
                     IWTTATVARLHGYMVWDTLFGIDNSLTGKPQMLEGADTSPDGLTWTMKLRDGLLWHDG
                     EKVLSRDCIASIQRWGKRDGFGQRLMGQTAEMKVVDDKSFSIRLTRPFPLMAYALGAN
                     DCFIMPERVAKTDAFQQITEYVGSGPYKFLRDEWVSGSSAAYAKNDRYVPRQEPPSYY
                     AGGKVVNFDRVEWKIMPDPATASAALQRGEVDWWENPISDLLPLLKKTPGLKVEVLDP
                     LGWIGVIAVNHTQPPFDNPKLLQAILPALNQQDYLDAALGDQQDLGGPGGFFISGSPL
                     ASKVGMDKITGKRDLALAKKLVAESGYNNEPIVLMSPSDQPQLVALAQVTDALYKSLG
                     LNSQYTSMDWGTLVTRRASHAPSSKGGWNSFCTAWGGLNMSNPGSNYPLRGNGNGGWF
                     GWPTDPAMEALRDKWFDAPDMATQKAVCRDMQALAFQNLPFFPVGQWFIPTAHRDNLT
                     GFVKAGFMLFWGVKRV"
     gene            complement(6681..>7076)
                     /locus_tag="VHX39_22950"
     CDS             complement(6681..>7076)
                     /locus_tag="VHX39_22950"
                     /inference="COORDINATES: protein motif:HMM:NF027363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016872 - intramolecular lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chalcone isomerase family protein"
                     /protein_id="HEX3994041.1"
                     /translation="VAGLYLEQRSNDSASILRSPERKLLDIRFLRDVDAVDARKAWQD
                     GFANNCRPPECYLDPRDVERFLAAIPPIHRGDETMMLFTPKGVDVTFDGRPLGDITDP
                     HFAETLLATFIGPVPPTPRLKRELLGSRD"
BASE COUNT         1271 a         2285 c         2176 g         1344 t
ORIGIN      
        1 cggcatgacg gatggggtca accgaagagt ctgcatcaat gccggttggt atcacacgat
       61 cggatgaagc ctcacaacag ccccttcacc cgcagcaagc caaacgccgc gagcgtcatc
      121 gcctcccgca ccgttccgtc ccggatcatc gcctcgaaat ccgccagcgc gaaagggcgg
      181 ctgatcatgt cctgttcagt cgtctccctg tcgggttccc cctggatcag gtcggtcgcc
      241 agatagatgt gaccgcgctg gttgcagtag ccaggcccct gaaaaatctc ccccacgcgg
      301 gtcatgcggc cggcggccaa cccggtttcc tcccgcagtt ccgccgccgc cagcaccagt
      361 ggatcggtgc cgggcgcctg ctcccacatc cccatcggga attcccagac ccgagcgctg
      421 accggatagc ggtattgctc caccagcgtc aggcacccgt cctgccatgg cacgatgacc
      481 acgaaatcgg cgcgctccac cacaccgtac agtccgtcgg aaccatccgg gcgccggatg
      541 cggtcttcac ggacccgcgt ccagcggttc tcgtaggcaa tgcggctgga gagggtaaca
      601 taagggttcg tcattcggtc gcccagtctg tgtcatgtgg caatcaagtg tcccgtccta
      661 gaagttcgtc gcatctcgcg gtgaacttca gattgggaac actagcacgg caacgcatcc
      721 agggcgccct tgtccgcaac aacgttccgg taccgcacaa caaccctgaa ttttccggaa
      781 ggcagcaggc cactgggcga taacataccg gtaccggatc aacttcaaac gcccccgggc
      841 aagatggcca agatgtaact ggtccgcatc agtcacgtat caaatactcg cttgccggac
      901 gcccacgccg ctcgtttcac gaagatgcgt agtgtttggc ctggacaaat tgaatagatg
      961 acgattccgc cttagcggga ggggccgaaa tttgaggcaa cgcaaatacg ctgccccgtt
     1021 caagaaaaag ggagtgccga accatgcagg accctgcgtc gggtgccgcg tcagcccagc
     1081 cggatagttt cgaccgaaac gccggcggag gcgacaccgg ccgcatcgcc gcccgcatcg
     1141 atcgcctgcc gctgacctgg acccaatggc ggctggcgct gatcacccag atcttctggg
     1201 gcgtgatcat cgccgcagac ggcattcccg ccaagctgta tccgttcatc tggggacccc
     1261 gccacagctt cggcaccact gcgttttccg tcctgctcgc cgtccagttc ggcgtcggaa
     1321 tcctggtcgg cgagtatctg atcggcattc tcgctgaccg agcaggaaga cggacagccc
     1381 tgctggtgtc ctcgctcgcc gtggcgctgc cgctgtggcc caccgctctg accgacaatt
     1441 ttggcctgtt gctgctgttc ttcggcctgt cctcggtcgg catgggcggc gtgctggcga
     1501 ccaacgtggt ctatatgggg gagatcgtac cccccgccga acgcggccgg gtcatgctgg
     1561 cctcccagat cctcgccgtc ctggtgtttg gcattctcgg caacgttccc gggattttct
     1621 gggtgccgct gcactaccag tggttcatct acctgttcac cgccgtgccg ctgttggtcc
     1681 tggtgccgct cgcgctgtgg ggcatgcccg aatcgccgcg ctggctggaa gcgcacggtc
     1741 accacgccga cgccgaacgg atcatggcca ggctggaggc ggattgtctg cgccgcagtg
     1801 gactggcagc cctgccggag cccgattatg ccggctacgc ggtgccggtg aacaagcacg
     1861 tgccgatggg tgagctgttc cgcggcgagt atggccagcg caccgtcctg ctgctggtcg
     1921 cctggatcat cggctatgcc ggattggtgt atggcttcac cggctacctg ccggtgctgc
     1981 tccgcagttt cggtttttcc gccagcgcaa cattcggcgc cctgttggtc gcaagcgtcg
     2041 gcggcggctg cctcggcctg gcgatctgct cgctgatcgg tgaggcggtc gaacggcgga
     2101 cctccatcgt ggtctccgcg gtgctgttct gcgccgcgat gttcgggctg tacttcaatc
     2161 acgggctggt cgccgcctat gtgctgtcgg cggttgcctg gggcatgatg atggtctggc
     2221 tgttcaacat gtacaactac accgcctcgg cctatcccac ccgcctgcgt gccaccggcg
     2281 tcggcctcac cgacgggctg ggccacctcg gatcgatctt cggcccggtg atcgccggcg
     2341 ccctgttcgc cagcaccgcc ttcgccggcc atgccggatg gtacatatat gtaacgatac
     2401 ccggcgccct ggtgcccgcg gcattgatcg gctggcgcgg catcagccag cagcgcgcga
     2461 tcctggagca gatctcaggc taagcgggtc tcgacgatgc gaggcggcca ctacgaccgc
     2521 cgcctcgcct ccagcggttt ttcatgcacc aggaccggcg tcagatcggc accggccggc
     2581 accggtgtgg cccaactggc gccgccggcg ttccacccgg tatcaatgtc gaaggcaacg
     2641 gtttgctggt cggcgccggc aagatcaccc agcaggctct gcgacatcgc gtgcccgatc
     2701 aatgtgcccg ccgccacccc ctgggttgtg aacgtcagca ggaactgctc ccggggtgcc
     2761 gcgatgtcct cggcaaggcc gtggagcggt tcggcgaaga tgggcgagag gaaatcgtcg
     2821 ttcgcctgga ccgcaagacc cgcggtatag ggtgtggtgc ccttgttgag gatggtgaca
     2881 ccggtcggat tcccgccctg ggtgacagtg agtgtgccgc cggtgtcgat ggccgccgtc
     2941 tggcccaatt ccaccggggc ggcggtgaag acggtaatga tcccgttcgc gacgactttc
     3001 gatgtcgaga cgtagacctg aaacttcatc tcaaatgcaa tcgtggtgtt ttccaggaat
     3061 tgcgtggtgg tgagccagac gaggggcttg cccgccgcat tggtcgtgtc gaacgcccgc
     3121 atgacataca gcgcgtagcc cagttccctg agcgcaacca atgtggcggg cgcaagtgta
     3181 acagtgatct gctgaagctt ggccatgatt ccccctttat gggctttaac tattcaggcg
     3241 cggcccgcac cttgcaccga ttccgcggac cacacaacga aatgacccag aatggctccg
     3301 actacgacca ccggcattga tgccgattct tctgccgacc ccatccgtca tgtgccgttc
     3361 cctgtcatgt gccgactcca ttcgtcatgt gcgaccccat ccgtcatgcc gacgcaggtc
     3421 ggcatccatg ccttttgccc gcgaaacaaa gacatgcatg gtcgaccttc gcccgccatg
     3481 gcacttgcag ggccgtgccg atgggtcaac gacaacgtcg gttgagagac gacacaaaca
     3541 tatccacgtt caggatcgac agcccccgat cacggcgcgg ctttcggtgc cggcggcagc
     3601 cccgccatga acttcaccag atagggcttc cacacccctg cgtagtaatg cgtgaaatga
     3661 ccgtgcgtgt ctttgccgta cggcgtcagg acataggtgc catgggcgat cttcttgaac
     3721 gccccttcta tggtaccgag cgttggcgga tcggcgaagt cctcgacgtt attgatcagc
     3781 aggacatgtg ccttgatctt cggcaggtcg ggctccgggt tgtagtcata gatcgattcg
     3841 atctcgtaga gcgtgttgtt ggcgtcgccg tttttcatca ttgccgccag gcgcttgtca
     3901 tacagcgcct tcgcggcctc catcgtcggt gcctcctcct gaatccgcac tggactgtcg
     3961 gtcagatcgt tgcccgccga cgagtacctg tagagtgtcg gacccttgtc gtagttgccg
     4021 ttgttccagg ccggatcatg ccggatcgac tcggcggtcc cgtggcgcag catgtagtta
     4081 cggccgctga tctggatcgg ctggcacgac atgcccaccg tcccgtccat caggccggga
     4141 taccactccg cccagaggaa ttgctgcatg cagccgagcg aactgccgat caccagccgc
     4201 aaatgcgcga ccttgagacc gtctgtgagc agccgatgcg tgacatcgac catatcgtgg
     4261 tagcggtaat gcggaaactt gcccttcagt ccatccgacg gcttcgacga tccgccgcgg
     4321 ccaagcgcat cgggcataat gatgtagtat ttcgccgggt cgagcggctg acccggcttg
     4381 aacaattcgt ttgccagtgt cggccggaac cagttgtcgc cggtgccggt attgccctgc
     4441 agcaacagca cgccgtttat gatttcgccc tcggtgtttt tccccgccgt gccgatcgtc
     4501 cgataatgca gcttcagttc gggcagcgtc tcgccgctga cgaatttgta gtccttgatg
     4561 acataatcac cagtctggta gccgggccac gcggccggat caactttgcc gccagactcc
     4621 tgggccagcg ccggagcggc gaggccgacg atagcggcga ccaaaacagc gtgaaaacgc
     4681 atcccgattt tcctcccctg acccggtgtg gagcgccaac acgattgacg acgacagccc
     4741 catgctcgga gaagtacgat cgtcgcttcg gacgcttttg acaacggccg cttgccaggg
     4801 accgccgacg cggccggaac agcggccgat atccgccccc ggcgagcaac aaccagcaca
     4861 aaaccgcgcc acgctctgcc gccgcaccca gcaacatgcc gctctcgacg tctgagcacc
     4921 ccacatccgt gcccaaatgc gccccgtcgc gggctgtggt ccggcatgtg catggccgaa
     4981 ggccaaaccc atgtaaggac acaagatgat caagcgacgc agcgtgctgg ccggcaccgc
     5041 ggcttctgcg acggtcggac tggcccgacc ctcgctggca cagggcgcaa aggtgctgaa
     5101 atacgtgccg caagccaacc tcgcgaaccc ggacccgatc tggacgacgg cgacggtggc
     5161 gcggctgcac ggctacatgg tgtgggacac gctgtttggc atcgacaaca gcctgaccgg
     5221 gaagccgcag atgctggagg gggcggacac gtcgccggac ggactgacct ggacgatgaa
     5281 gctgcgcgat gggctgttgt ggcacgacgg tgagaaggtg ctttcgaggg actgcatcgc
     5341 ctccatccag cgctggggca agcgcgacgg gttcggtcag cgcctgatgg ggcagaccgc
     5401 cgagatgaag gtggtggacg acaagagttt ctccatccgg ctgaccaggc cgtttccgct
     5461 gatggcctat gcgctggggg cgaacgattg cttcatcatg cccgagcgcg tggccaagac
     5521 cgatgcgttc cagcagatca ccgagtatgt cggcagcggt ccttacaagt tcctgaggga
     5581 tgaatgggtt tcaggttcgt cggcggctta cgccaagaat gaccgctatg tgccgcgcca
     5641 ggagcctccg agctactacg ctggcggcaa ggtggtgaat ttcgaccggg tggaatggaa
     5701 gatcatgccc gatcccgcca cggcttcggc cgcactgcaa cggggcgagg tcgattggtg
     5761 ggaaaacccg atctccgacc tgctgccgtt gctgaagaag acccccggcc tgaaggtcga
     5821 ggtgcttgat ccgctgggct ggatcggtgt catcgcggtc aatcatacgc agccgccatt
     5881 cgacaatccc aagctgctgc aggccattct gcccgcgctc aaccagcagg actatctcga
     5941 tgccgcgttg ggcgatcagc aggatctcgg cggcccgggc gggttcttca tcagcggctc
     6001 accgctcgcc agcaaagtcg gcatggacaa gatcaccggc aagcgggacc tggcgctggc
     6061 caagaagctg gtggccgaaa gcggctacaa taacgagccg attgtactga tgtcgccctc
     6121 cgatcagccg cagttggtcg cgttggccca agtaacggac gcgctctaca agtcgctcgg
     6181 tttgaactcg caatacacca gcatggattg gggcaccctg gtcacgcggc gcgcgagcca
     6241 tgcaccatcg agcaaaggcg gttggaacag tttctgcact gcctggggtg ggctgaacat
     6301 gtcgaacccc ggcagcaact acccgctgcg cggcaacggc aatggcggct ggttcggctg
     6361 gccaaccgac ccggcaatgg aggcgttgcg cgacaagtgg ttcgacgcgc ccgacatggc
     6421 gacacagaag gccgtctgcc gggacatgca ggcgctggcg ttccagaacc tgccgttctt
     6481 tccggtgggc cagtggttca tacccaccgc ccaccgcgac aatctgaccg ggttcgtaaa
     6541 ggccggattc atgctgttct ggggcgtcaa gcgggtctga ggtggacccc atccctggac
     6601 gaggggccga taccctgtgc ctgatgattc gattgttccg cgtcggcccc taagccagcc
     6661 tattttcgat aggggccagc ctaatcccgg ctacccagca actcgcgctt cagccgcggc
     6721 gtcggcggca ccggcccgat gaacgtggcc agcagcgtct cggcgaaatg cgggtcggtg
     6781 atgtcgccca acggccgccc atcgaacgtg acatcgacgc ccttcggggt gaacagcatc
     6841 atggtctcat cgccgcggtg gatgggcggg atcgccgcga gaaaacgctc gacatcccgc
     6901 ggatcgaggt aacattccgg cggtcggcaa ttgttcgcga aaccatcctg ccacgccttc
     6961 ctggcatcca ccgcatcgac gtcgcgcagg aaccggatat ccagcagctt ccgctccggc
     7021 gaacgcagga tgctggcgga atcgttgctc cgctgttcca gatacagtcc tgcaac
//
LOCUS       DATAVD010001202         4560 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_301081, whole genome shotgun sequence.
ACCESSION   DATAVD010001202 DATAVD010000000
VERSION     DATAVD010001202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4560
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_301081"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /locus_tag="VHX39_22955"
     CDS             <1..430
                     /locus_tag="VHX39_22955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HEX3994042.1"
                     /translation="YASITDLGRREGVAFAFERIRRTPSSIDAHRLVRFAGRHGRADA
                     MVEALFSVHFSEGYDIGDRTVLVALATACGLDAQATKTFLASDEEFDAVHADNLRAHR
                     LGINGVPCFVIGGRHAIAGAQEPEVIERLLDVAAVDATEI"
     gene            complement(427..1350)
                     /locus_tag="VHX39_22960"
     CDS             complement(427..1350)
                     /locus_tag="VHX39_22960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019086582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogen peroxide-inducible genes activator"
                     /protein_id="HEX3994043.1"
                     /translation="MTILPSPQQLRYLVTLAESHHFGRAALACSVTQSTLSAGILTLE
                     RQLDAQILDRAAGKHVVFTPLGLDLIERAKAALAALEAVTETANTARAPMSGPLRLGI
                     IPTIGPFLLPKLMPVLRAAFPNLRLFLREDTTARLVDRLNSNRLDVLLLALPCDCGGA
                     DAMPVARDEFLVALPPNHRLANQPSISIAALATERLLLLEDGHCLREQALAVCGLLAG
                     DKGDGQDSYAATSLHTLVQMVAGGLGVTLLPRLAVAAGVTEGTDLILRPLAAAGAWRT
                     LGLAWRPNAPKAADYRALAPHLAETCRETVC"
     gene            complement(1382..2002)
                     /gene="ureG"
                     /locus_tag="VHX39_22965"
     CDS             complement(1382..2002)
                     /gene="ureG"
                     /locus_tag="VHX39_22965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004273348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreG"
                     /protein_id="HEX3994044.1"
                     /translation="MSFSSNGPLRVGVGGPVGTGKTALMDALCKLFRTRYDIAAITND
                     IYTKEDAEFLTRAGSLPPDRILGIETGGCPHTAIREDASINLAGVADLRRKFPALDLI
                     LIESGGDNLAATFSPELADLTIYVIDVSAGDKIPRKGGPGITRSDMLVINKIDLAPFV
                     GASLEVMDRDARRMRGERPFVFANIRAGTGVAEIAAFIERQGGLGS"
     gene            complement(1999..2670)
                     /locus_tag="VHX39_22970"
     CDS             complement(1999..2670)
                     /locus_tag="VHX39_22970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory UreF family protein"
                     /protein_id="HEX3994045.1"
                     /translation="MTMIMIMNDPAAVMRLLTWLSPGFPTGAYAYSHGLEWAIETHDI
                     RDGATLTGWLDDVIAQGSARTDTILLRHAHRAANDPNALRNIVALALATAAGRERHDE
                     ALALGRAFMRAASGWGLPDLPEDTPYAVAVGAMAGAHSIEEDITATAYLQTLASNLIS
                     AAVRLVPLGQTTGLHTLAALEPVILHTAAATKSATLDDLGGCAFRSDLAAMRHETQYT
                     RLFRS"
     gene            complement(2645..3112)
                     /locus_tag="VHX39_22975"
     CDS             complement(2645..3112)
                     /locus_tag="VHX39_22975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010511540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreE"
                     /protein_id="HEX3994046.1"
                     /translation="MRASAVLPAGSWSDPIDEVLIDFDRRHRRRIVLTTQSGAELLID
                     LPQAVRLRDGDGLALEDGGIVGVRARPEPLLEIHAHDDGELVRIAWHLGNRHLPVQLL
                     GDRIRIRADHVIRDMVEGIGGHVVAVEAPFDPEAGAYAPGAGHHHHDDDHDHE"
     gene            complement(3112..>4560)
                     /gene="ureC"
                     /locus_tag="VHX39_22980"
     CDS             complement(3112..>4560)
                     /gene="ureC"
                     /locus_tag="VHX39_22980"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009039 - urease activity [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit alpha"
                     /protein_id="HEX3994047.1"
                     /translation="AILHGRIKKIGKAGNPDVQPGVDIIIGPGTEIIAGEGKILTAGG
                     IDSHIHFICPQLIDEALSSGVTTLVGGGTGPATGTSATTCTPGPWHLARIIQAAEGLP
                     VNLGFAGKGNATRPQALEEMIRAGASCLKLHEDWGTTPAAIDNCLAVADRFDVQVMIH
                     TDTLNESGFVEDTIAAFNGRTIHAFHTEGAGGGHAPDIIKVASLANVLPSSTNPTRPY
                     TANTLDEHLDMLMVCHHLDSTIPEDVAFAESRIRKETIAAEDILHDLGALSMMSSDSQ
                     AMGRVGEVIIRTWQTAHKMKQQRGALAGDSERNDNLRAKRYVAKYTINPAIAQGFSRE
                     IGSIEEGKLADLVLWSPAFFGVKPDLVIKGGMIACAAMGDPNASIPTPQPVHYRPMFG
                     TYGNAMAETCLTFVSGAALDAGLGKALRLNRRLVAVANTRGGIGKASMIHNDATPVIE
                     VDAETYEVRADGELLTCEPATVLPMAQRYFLY"
BASE COUNT          837 a         1463 c         1424 g          836 t
ORIGIN      
        1 ctacgcctcg atcaccgacc tgggccgccg agagggtgtc gccttcgcct tcgagcgcat
       61 tcgtcgtacc ccgtcctcga tcgacgccca ccgccttgtc cgcttcgcgg gccgccatgg
      121 ccgagcggac gccatggtcg aagccctgtt ctctgtgcat ttctccgagg gctacgacat
      181 cggcgaccgc accgtgctgg tcgcgttggc gactgcatgt ggcctggacg ctcaggcaac
      241 caagaccttc ctcgcctctg acgaagagtt cgatgccgtc cacgccgaca atcttcgtgc
      301 ccatcgactg ggcatcaacg gtgtgccgtg ctttgtgatc ggcgggaggc atgcgatcgc
      361 cggagcccag gaacccgagg ttattgagag attgctggac gtggcggcag tggacgcgac
      421 agaaatctaa caaaccgtct cccggcacgt ctccgccaga tgcggcgcca atgcccggta
      481 atccgcggcc ttcggcgcat tcggacgcca cgccaggccc aacgtccgcc acgccccggc
      541 ggcggccaaa ggacgcaaaa tcaggtccgt tccctcggtc acccccgccg ccaccgccaa
      601 tcggggcagc aacgtcacgc ccaacccgcc ggcgaccatc tgcaccagcg tgtgcaggct
      661 ggtggcggca tagctgtcct gcccgtcccc cttgtccccg gccagcaggc cacacaccgc
      721 cagcgcctgc tcgcgcagac aatgcccgtc ctccaacagc aacagccgct ccgttgccaa
      781 cgccgcaatt gagatggacg gctggttggc gaggcgatga ttgggcggca gagcgaccag
      841 gaactcatcg cgcgccactg gcatcgcatc ggccccgcca cagtcgcatg gcagagccag
      901 cagaagtaca tccagccggt tgctgttgag ccggtccacc agccgcgccg ttgtatcctc
      961 ccgcaggaac agccgcaggt tggggaatgc cgcgcgcaac accggcatca gtttcggcaa
     1021 caggaacgga ccgatggtgg ggatgatgcc aagccgcaac ggcccgctca tcggcgcacg
     1081 cgcggtgttg gcagtttccg tcaccgcctc cagcgccgcc agcgccgctt tggcgcgttc
     1141 gatcagatcc agtccgagcg gcgtgaacac cacgtgcttg cctgccgcac gatccaggat
     1201 ctgcgcgtca agctggcgtt ccaaggtcag gatccccgcc gacagcgttg attgcgtgac
     1261 cgagcaggcc agcgccgccc gcccgaaatg atgtgattcg gcgagcgtca cgagatagcg
     1321 gagctgttgc gggctgggga ggatggtcat ggcgcagaga tgttggatat tccgtgaagg
     1381 ttcaagagcc gaggccgccc tgacgttcga tgaaagcggc gatctccgca acgccggtgc
     1441 cggcacgaat gttggcgaat acgaacggcc gctcgccgcg cattctgcgg gcgtcgcgat
     1501 ccatcacctc caggctggcg ccgacaaagg gcgcgaggtc gatcttgttg atcaccagca
     1561 tgtcgctgcg agtaatcccc ggcccgccct tgcgcggtat tttgtcgccg gccgatacgt
     1621 cgattacata aatcgtcaga tctgcaagtt ccggactgaa cgtcgcggcc aggttgtcgc
     1681 cgccgctctc gatcaggatc aggtcgagtg ccgggaattt tcgacgaaga tcggcgaccc
     1741 cggcaaggtt gatgctggcg tcttcgcgga ttgcggtgtg cggacagccg ccggtctcaa
     1801 tacccaggat gcggtccggt gggagggagc cggcgcgggt gaggaactcg gcatcttcct
     1861 tggtgtagat gtcgttggtg atcgctgcga tatcataccg agttcgaaat agtttgcaca
     1921 aggcatccat cagcgcggtc ttgccggtgc cgaccggccc gccgacaccg acccgcagcg
     1981 ggccattgga agaaaaactc atgagcggaa caacctcgta tattgggttt cgtgccgcat
     2041 tgcggcgagg tcggagcgga acgcgcaacc acccaggtcg tcgagggttg ccgatttggt
     2101 cgccgccgca gtgtgcagga tgacgggttc cagcgcggcc aacgtgtgca gcccggtggt
     2161 ctgtccgagt ggcaccaaac ggaccgcagc ggaaatgaga ttgctggcga gcgtttgcag
     2221 atacgcggtt gcggtaatgt cttcctcgat gctgtgcgct ccggccatgg cacccaccgc
     2281 aacggcgtat ggagtgtcct ccggcaggtc cggcaagccc caaccagacg ctgcgcgcat
     2341 aaacgcccga cccagagcca gcgcttcgtc atggcgttcg cgaccggcgg cggtggcgag
     2401 cgccagcgca acgatattcc gtaacgcatt tggatcgttc gccgcacggt gggcgtgacg
     2461 tagcaggatc gtgtcggtcc gagccgagcc ttgcgcgatc acgtcatcga gccatcctgt
     2521 caaagtcgcg ccgtcgcgaa tgtcgtgcgt ttcgatagcc cattccaggc catgtgaata
     2581 agcgtatgcc ccggtcggaa atcccggtga cagccaggtt agcaggcgca ttaccgcagc
     2641 gggatcattc atgatcatga tcatcgtcat gatgatgatg tcccgcaccc ggcgcgtaag
     2701 caccggcttc cggatcgaac ggcgcctcaa ccgctacaac gtgaccgcca atgccttcaa
     2761 ccatatcccg aatcacgtga tccgccctga tgcggatacg gtcgcccaga agctgcaccg
     2821 gcaaatgccg gttgcccaaa tgccacgcga tgcgcaccag ttcgccgtcg tcgtgcgcgt
     2881 gaatttccag aagaggttcg ggacgcgcgc gcaccccgac gatgccgcca tcctccagcg
     2941 ccaatccgtc gccgtcgcgc aaccgcaccg cctgaggcag gtcgatcagc aattcggccc
     3001 ccgattgcgt ggtcagaacg atccggcggc ggtggcggcg atcgaagtcg atcaacacct
     3061 catcgatcgg atccgaccag gagccagccg gcaggacagc agaggcgcgc atcagtaaag
     3121 aaaatatcgt tgcgccatcg gcagcaccgt ggcgggttcg caggtcagca gttcgccgtc
     3181 ggcgcggacc tcgtaggttt ccgcatcgac ttcgatcacc ggagtggcat cgttatggat
     3241 catcgaggct ttgccgatgc cgcctcgcgt gttggcgaca gcgacgagac gccggttcag
     3301 cctgagtgcc ttgcccaatc cggcatccag ggccgcgccg gaaacgaacg tcaggcaggt
     3361 ctccgccatg gcattgccat acgtgccgaa catcggccgg taatgcaccg gctgcggcgt
     3421 cgggatcgag gcattgggat cgcccatcgc ggcgcaggcg atcatgccgc ccttgatcac
     3481 cagatccggc ttgacgccaa agaacgccgg cgaccacagc accaggtccg ccagcttacc
     3541 ttcttcgatc gaaccgattt cccgggagaa tccctgcgcg atcgccgggt tgatggtata
     3601 tttcgcaacg taacgtttcg cccgcagatt gtcgttacgt tcgctgtcac cagcgagtgc
     3661 gccgcgctgc tgcttcatct tatgagcagt ttgccatgtg cggatgatca cctcgccgac
     3721 gcggcccatc gcctggctgt ccgacgacat catcgagagt gcgccgagat catgcagaat
     3781 gtcctcggca gcgatggttt ccttgcggat ccggctttcc gcgaaggcaa catcttcggg
     3841 aatggtgctg tccagatgat ggcacaccat cagcatgtcg agatgctcat cgagcgtatt
     3901 ggcggtgtag ggccgggtcg ggttggtact gctcggcaac acgttggcga ggcttgcaac
     3961 cttgatgatg tcgggcgcgt gaccaccacc ggcgccttca gtgtggaagg cgtggatggt
     4021 gcggccgttg aacgcagcga tggtatcttc gacgaagccc gactcattca atgtgtcggt
     4081 gtggatcatc acctggacat cgaaacgatc cgccaccgca aggcagttgt cgattgcggc
     4141 aggggtggtg ccccagtcct cgtgcagctt caggcaggat gcaccggccc tgatcatttc
     4201 ctccaacgcc tgcggtcgtg ttgcgttgcc tttaccggca aagccgagat tgaccggcaa
     4261 accctcagcc gcctggatga tgcgcgcgag atgccacgga cccggagtgc aggtggtggc
     4321 cgaagtgccg gtcgcgggtc cggttccgcc tccgaccagg gtcgtgacac ctgaggacag
     4381 agcttcatcg atcagttgcg gacaaatgaa atggatgtgg ctgtcgatgc cgccggcggt
     4441 gaggatcttg ccttcgccgg caatgatctc agtccccggt ccaatgatga tgtcgacacc
     4501 cggctgcacg tccggattgc ccgccttgcc gatcttcttg atcctgccat gcaggatcgc
//
LOCUS       DATAVD010001203         3278 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2721655, whole genome shotgun sequence.
ACCESSION   DATAVD010001203 DATAVD010000000
VERSION     DATAVD010001203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3278
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2721655"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            191..2062
                     /locus_tag="VHX39_22985"
     CDS             191..2062
                     /locus_tag="VHX39_22985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3994048.1"
                     /translation="MRFFISLLLLTLLAHGASAQGASPVPPQYGFTVLGEPALPRDFK
                     AFPYVNVNAPKGGEVHLASIGTFDSFNPFILRGTPELHGTSPWITLPGGAGSGSSVGH
                     VWESLLTPSANEIATGYGHLAESIEVPPDKTWVAFNLRPEAKFSDGVPVTAEDVAWTY
                     RTLIEQGRPSIRIQMGDVKDVVVEGPRRVRFIFKTTQNRELPLIVGGLPVMPKHFFEG
                     RDFTKPLTDAPIGSGPYRITNFELGRSVTYTRDPNWWAANLPTGRGTNNFDTVRVSYF
                     RDQTVAMEAFKAGKVDIRSENIAKNWATAYDFPAVQNHAVIKREYTHELPTGMQGYAM
                     NTRRPIFADPRVRQAITWAFDFEWTNKNLFYGAYKRTLSYFSNTPLAATGLPSPEELK
                     LLEPYKDSLPAGLLTQPFTLPVTDGSGNNREQLLQALKLLQAAGWQVKDRVLVQPNGQ
                     PAAFSILLDDPGLERVALPYVQNLRKLGFDVQVRTVDPAQFQHLTDDFDFDMTMMIYP
                     GSDIPGSELRDYWSCAGAKSTGSFNIPGICSPATDAMIEKVIAAQDRGTLRTAARALD
                     RLLLWGWYMVPNWYSQDFHIAYWDRFGDPGIPIREGFNFDTWWVDQQKAAKNDEARH"
     gene            2064..3131
                     /gene="yejB"
                     /locus_tag="VHX39_22990"
     CDS             2064..3131
                     /gene="yejB"
                     /locus_tag="VHX39_22990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter permease YejB"
                     /protein_id="HEX3994049.1"
                     /translation="MAAYLIRRLILVIPTLFGIIAINFVIIQFAPGGPVEQALAELRG
                     KGGLSSRLGSASSDIGSAGVYRGAQGLDPHVIADIRKMFGFDKPPLTRFGDMLWGYLH
                     FDFGRSFFRDKSVLSLIFEKLPVSLSLGLWSTVLIYLISIPLGIRKAVHDGSRFDVAT
                     SAAVLVGYALPGFLLAILLVVLFAGGSFLSIFPLSGLTSEGSRFWPWPDRVLDYLWHM
                     VLPITAMVAGGFASLTMLTKNCFLEEIGKQYTVTARAKGASETRVLYGHIFRNAMLLI
                     VAGFPQAFVGILFTSALLVEIVFSLDGLGLLGFQSAIQRDYPVMFGTLYIFTLLGLVM
                     QIIGDMMYTVVDPRIDFESRR"
     gene            3128..>3278
                     /locus_tag="VHX39_22995"
     CDS             3128..>3278
                     /locus_tag="VHX39_22995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011390916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3994050.1"
                     /translation="MTLSHVTRRRLAIFRANRRGYWSLWIFAVLFGGSLFAEFIANDR
                     PLLIRY"
BASE COUNT          620 a          943 c          958 g          757 t
ORIGIN      
        1 gagggcgccg gcggctccgt caccgactgg cagggtcatg cgctgcagcc tggaggtgac
       61 gggcgcgtgc tgtcgctagg agaccaggcg ctgctgcccg cggtcctgcg ggaacttaat
      121 cattctccgg ttgccaccat ctgaacgcgc tgccacgctt cggcgcgaca aacctccctg
      181 ggacagccaa gtgcgattct ttatctcttt gttattgctg acccttctgg cccatggtgc
      241 atcagcacaa ggcgcatcgc cggtgccccc gcaatacgga ttcacggtgc ttggcgaacc
      301 cgcgctcccc cgtgatttca aggcattccc ttacgtcaac gtgaatgcgc ccaagggtgg
      361 cgaggttcac cttgcctcga tcggcacgtt cgacagcttt aatccgttca tcctgcgggg
      421 caccccggaa ttgcatggga cgtcgccctg gatcaccctg cccggcgggg ctggctccgg
      481 ttcgtccgtc ggacacgtgt gggaaagcct gctgacgccc tcagccaatg aaatagcaac
      541 cggctacggc catttggccg agtcgatcga ggtgccgccc gacaaaacct gggttgcctt
      601 caatttgcgt cccgaagcga aattctccga tggcgttccg gtgaccgcag aggacgtagc
      661 ctggacctat cgcactctga tcgagcaggg ccgcccgtcg atccgcatcc aaatgggcga
      721 cgtaaaagac gtggtggtcg agggaccgcg ccgagtacgt tttattttca aaactacaca
      781 gaatcgtgaa ttgccgttga ttgttggcgg cctgccggtt atgccaaaac acttctttga
      841 aggccgtgac ttcaccaaac cgctgaccga cgcgcccatc gggtccggac cctatcgcat
      901 caccaatttc gaactgggcc gttcggtcac ctatacccgc gatccgaact ggtgggcggc
      961 gaatctgccg accggccgcg gcaccaacaa tttcgatacc gttcgcgtct catattttcg
     1021 tgatcagact gtggcaatgg aagccttcaa ggccggcaaa gtcgacatcc gcagtgagaa
     1081 tatcgccaaa aactgggcta ccgcctacga ctttcctgcg gtccagaacc atgcggtcat
     1141 caagcgcgaa tacacccacg aactgcctac cggcatgcaa ggttacgcga tgaacacgcg
     1201 ccgtccgatc tttgccgatc cgcgcgtcag acaggccatt acctgggctt ttgatttcga
     1261 atggaccaat aaaaatctgt tttacggtgc ttacaaacgg accctaagtt atttcagcaa
     1321 cacgccgctc gcggccactg gtctaccgtc acccgaggaa ttgaagttgc tcgaacccta
     1381 taaggatagt ctgccggccg ggctgctgac ccaaccgttc acactgccgg tgacggatgg
     1441 cagcggcaac aatcgcgagc aactgcttca ggcactaaag ctgctgcaag cggccgggtg
     1501 gcaggtcaag gaccgcgtgc tggttcagcc taacggtcaa cccgctgcgt tctcgatcct
     1561 gctggacgac ccgggactgg agcgtgtcgc gttgccctat gtgcagaatt tacggaaact
     1621 gggctttgat gttcaggtgc gcactgtcga tcccgcgcaa ttccagcatt tgaccgatga
     1681 cttcgatttc gacatgacca tgatgattta tcctggatcc gacatcccag gcagcgaatt
     1741 gcgcgattac tggtcatgcg ccggagcgaa atcgaccggt agcttcaata ttccgggcat
     1801 ttgcagtcca gcgaccgatg cgatgattga aaaggtgatt gcagcccagg atcggggcac
     1861 gctgcggacg gcggcgcgag cattggatcg gttgctactg tggggctggt atatggtgcc
     1921 gaattggtac tctcaggatt tccacatcgc ttactgggat cgtttcggcg atcctggcat
     1981 tccgatccgc gaaggtttca atttcgacac ctggtgggtc gatcaacaaa aagccgcgaa
     2041 aaacgacgag gcgcggcact gacatggcgg cctatttaat tcgtcgcctg attctggtca
     2101 ttcccacgtt gttcggcatt atcgcgatta atttcgtgat cattcagttc gcgcctggcg
     2161 gcccggttga acaggcgctc gcggaattgc gaggcaaggg cggattatcc agccgcctgg
     2221 gctcggcgag ttccgacatc ggttcggcgg gcgtgtatcg aggtgcacag ggacttgatc
     2281 cgcacgtcat agcggacatc agaaaaatgt ttggcttcga taagccgccg ttgacgcggt
     2341 ttggcgatat gctgtggggt tatttgcatt tcgacttcgg ccgcagtttt ttccgcgata
     2401 agagcgtact gagcctgata tttgagaagt tgccggtgtc gctgtcgctc ggtctctggt
     2461 cgacggtgtt gatctatctc atctccattc cgcttggcat tcgcaaagcc gtccatgacg
     2521 gcagccggtt cgatgtggca accagcgccg cggtcttggt gggatacgcg ctgccgggct
     2581 tcctgctggc aattctgctg gtggtgctgt tcgccggcgg cagctttctg agcatctttc
     2641 cattgagcgg actgaccagc gagggctccc ggttctggcc gtggccggac cgcgtgctgg
     2701 actatctctg gcatatggtt ttgccgatca ccgcaatggt cgccggtggt ttcgccagcc
     2761 tgacgatgct gaccaagaat tgctttctgg aggagatcgg caagcaatac accgtcaccg
     2821 cccgcgccaa gggagccagc gagaccaggg tgctgtacgg tcatatattt cgcaatgcca
     2881 tgctgctgat cgtggcaggc ttccctcagg cgttcgtggg tatcctgttc acgtccgcgc
     2941 tgctggtgga gatcgtgttt tcattggatg gactgggctt gctcggcttt cagtcggcca
     3001 ttcaacggga ctatcccgta atgttcggca cgctttatat tttcacgctg ctcggtctgg
     3061 tgatgcagat catcggcgat atgatgtaca cggtggtcga tccgcgcatc gatttcgagt
     3121 ccaggcgttg acgttatcgc atgtgacaag gcgacggctg gccatttttc gtgccaaccg
     3181 gcggggatac tggtcgcttt ggatcttcgc cgtgctattc ggcgggtcat tgttcgccga
     3241 gttcattgcc aacgaccggc cgttgctgat ccgctacg
//
LOCUS       DATAVD010001204         2034 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2907226, whole genome shotgun sequence.
ACCESSION   DATAVD010001204 DATAVD010000000
VERSION     DATAVD010001204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2907226"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..442
                     /locus_tag="VHX39_23000"
     CDS             <1..442
                     /locus_tag="VHX39_23000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX3994051.1"
                     /translation="VGLLFNALDLDPDWYSSAFGAQLTWTLPFGLLIMFAVFNRFNRA
                     WEEAARDQGASPWQSFWHVVLPIIAPSVIGIALFGFTLSYDEFARTLLTAGSDNTLPL
                     EIFGMTTSVTTPVLYALGTLTTAFSFLVILCTLVIVRLLAARRA"
     gene            464..1093
                     /gene="upp"
                     /locus_tag="VHX39_23005"
     CDS             464..1093
                     /gene="upp"
                     /locus_tag="VHX39_23005"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014104984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEX3994052.1"
                     /translation="MQPVTIPDHPLLRHKLTLLRDRYTPTGMFRQVAREISLLMAYEV
                     MRDLPLEPIDIETPMEPMRAEHLAGKKLCLVSILRAGNGILDGMLDLVPSARVGHIGM
                     YRDPDTLQPVEYYLKLPSDIAERLVILVDPMLATGHSAVAAATRLKQAGVTAMKFVCL
                     IAAPEGIAAFTEAHPEVPVFTAAIDRELDSHGYIHPGLGDAGDRFYGTR"
     gene            1197..>2034
                     /locus_tag="VHX39_23010"
     CDS             1197..>2034
                     /locus_tag="VHX39_23010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994053.1"
                     /translation="MSQLEIADTNVTADAERASSPYVPSLQRTAGQPPPIAANGGLSY
                     MAFDRDGDAGTNTAIQDALAEIADGEGQRVTDMINSAPPGAAIKTKWGFGFRKYEECL
                     DYIRKNNAIRAPEGGVSVPLPYTVYERPTWSIVPSNAVWHDPERADVAAILRKNEQDN
                     RKRDLWFPQVMRDARRIGEYYPGLAPDTPECMDKLGVSLAHLESKCTNFYDAAEVERV
                     FYPEIEKLLLEFFPGATDALVYNHDVFDKDYSGDRTEDQANKNPGVNARYATLVHNDL
                     NDN"
BASE COUNT          401 a          635 c          618 g          380 t
ORIGIN      
        1 cgtaggactg ttgttcaatg cactcgatct cgatccggat tggtacagtt ccgcgttcgg
       61 agcgcagttg acctggacac tgccgttcgg tttgctgatc atgttcgcgg tgttcaaccg
      121 gttcaatcgt gcgtgggagg aagcagcgcg cgaccagggg gcatcgccct ggcaatcctt
      181 ttggcatgtt gtgctgccga ttattgcccc cagtgtgatc ggcatcgccc tgttcggctt
      241 cactttgtcc tacgacgagt ttgcccgcac gctgctgacc gccggcagcg acaacacctt
      301 gccgctggag atctttggca tgaccaccag cgtgaccact ccggtgctgt acgcgcttgg
      361 cacgttaacg actgcgtttt cctttttggt tatcctctgt acccttgtga tcgtccggct
      421 actcgctgcc agacgcgcct gacaacggtg aggaggatac gcgatgcaac cggtaaccat
      481 acccgaccac ccgctgctgc gtcacaagct gactttgctg cgcgaccgct acacgccaac
      541 cggcatgttc cgtcaggtcg cccgggaaat cagcctgttg atggcgtatg aagtgatgcg
      601 cgacctgccg ctggaaccga tcgacatcga aacgccgatg gagccgatgc gggcagagca
      661 tttggccggc aaaaagctgt gcctggtttc catcctgcgc gccggcaatg ggatcctcga
      721 cgggatgctg gacctggttc cctccgcccg ggtcggccac atcgggatgt accgcgatcc
      781 ggacacgctg caaccagtgg agtattatct gaaactgccg agcgacattg ccgagcggtt
      841 ggtcatattg gtggatccga tgctggcgac cgggcactcg gcggttgctg cagccacacg
      901 cctgaaacag gcgggcgtga ccgcaatgaa atttgtttgt ctgatagctg cgcctgaagg
      961 catcgcggcc tttaccgagg cccatcccga ggtgccggta ttcaccgcgg cgatcgaccg
     1021 cgagctcgac agccacggct acatccaccc gggactgggc gatgccggag accggtttta
     1081 cgggacgcgg tagttcgcga tcacctctga ccgcggcgcg cacgcccgga aaatcatggt
     1141 ctggaaaccc cgggctttgt gtgccacggt tacaaggaaa taaccggagg tgagccatga
     1201 gccagctcga gatcgcagac accaacgtta ccgcggacgc cgagagagct tcgtcgccct
     1261 atgtgccgtc gctgcagcgc acggctggcc aacccccgcc gatcgcggcg aacggcggct
     1321 tgtcctacat ggcgttcgac cgtgacggcg atgcgggaac caacacggcg atccaggacg
     1381 cgctcgccga aatagccgac ggcgagggcc agcgcgtgac cgacatgatc aacagcgcgc
     1441 cgcccggggc cgcaatcaag accaaatggg gcttcgggtt ccgcaaatac gaagaatgcc
     1501 tggactacat ccgcaagaac aacgccatcc gggcacccga aggcggcgtc tcggtgccgc
     1561 tgccttacac ggtctacgag cggccgacct ggtctattgt cccctcaaac gcggtttggc
     1621 acgacccgga gcgcgccgat gtggcggcga tcctgcgcaa gaacgagcaa gacaaccgca
     1681 agcgggacct ttggttcccg caggtgatgc gagacgcgcg gcgcatcggc gagtactacc
     1741 cgggtctcgc gcccgacact cccgaatgca tggacaagct tggtgtctcg ctggcccacc
     1801 tcgagtcgaa atgcacaaat ttctacgacg ccgcggaggt ggagcgggtg ttctatccgg
     1861 agatcgagaa gctcctgctg gaattcttcc ccggcgcgac cgatgcactg gtctataatc
     1921 acgacgtgtt cgacaaggat tactcgggcg accgcacgga agaccaggcc aacaagaacc
     1981 cgggtgtgaa cgcccgttac gcaacccttg tgcacaatga cctgaacgat aaca
//
LOCUS       DATAVD010001205         2115 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3090962, whole genome shotgun sequence.
ACCESSION   DATAVD010001205 DATAVD010000000
VERSION     DATAVD010001205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3090962"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..203
                     /locus_tag="VHX39_23015"
     CDS             <1..203
                     /locus_tag="VHX39_23015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994054.1"
                     /translation="LDTGDRSNFSNGGGATVLHPHFSTHVWEGMGYAKLVVSGREVDS
                     IRHRLDTRARVLGSTIRRTDAA"
     gene            complement(324..1169)
                     /locus_tag="VHX39_23020"
     CDS             complement(324..1169)
                     /locus_tag="VHX39_23020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX3994055.1"
                     /translation="MKLLRYGPAGAETPGMLDQDGAIRCLGGVVRDIDGFALSPASLK
                     MLAGINPMSLPRVEGNPRIGPCVVRPVNYICIGLNYADHAAEAGMPVPKEPIIFLKSL
                     GAFCGPNDDVMRPRESKKLDWECELGIVIGTTARYVSEADSMNHVAGYCVCNDVSERE
                     FQLERSGTWDKGKGADTFGPTGPWMVTRDEVPDPQNLALWTEVNGKKMQNGSTQTMIF
                     GVRKLVSYVSHFITLHAGDVIATGTPPGVGSGIKPEPVFLQPGDVMRLGVEGLGIQTQ
                     RILQA"
     gene            complement(1188..1937)
                     /locus_tag="VHX39_23025"
     CDS             complement(1188..1937)
                     /locus_tag="VHX39_23025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3994056.1"
                     /translation="MTAALAGKTAFVTAAGQGIGRATALAFAAAGAHVIATDVDEAKV
                     HGIASDAIRIAKLDVLHADDIERAARDAGAVDILFNCAGFVPQGTVLEATDDEWSFAF
                     ELNCRSMFRTMRSFLPGMLERGHGVILNMASVASSLKGVPSRFIYSATKAAVIGMTRS
                     VAADYVTRGVRINCLCPGTVQTPSLDERIAVNAAVAGSVEAAREAFIARQPMGRLGSA
                     EEIAALAVYLASDAAQFITGQAVVIDGGLTL"
     gene            complement(1934..>2115)
                     /locus_tag="VHX39_23030"
     CDS             complement(1934..>2115)
                     /locus_tag="VHX39_23030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994057.1"
                     /translation="TQVRARDEGSTLMTERNLTPISNYFIDQHKACLLATRRGHGTAM
                     TTGVGVCRMQTETLS"
BASE COUNT          420 a          693 c          593 g          409 t
ORIGIN      
        1 acctggacac cggcgaccgt tcgaacttca gcaacggtgg cggcgccacg gtgttgcatc
       61 cccatttttc gacccacgtc tgggagggaa tgggttacgc aaagctcgtg gtgtctggcc
      121 gggaagtcga cagcatccgc catagattgg acaccagggc gcgggttctg ggttcgacca
      181 tacgacgcac cgacgcggcg tgactggatt gagtggcaaa gcaacattca tcacgcgcca
      241 ccgcagacgg cagttttatt gtgctcgcga tggagcggca tgcacgaata tccgcatgcc
      301 gctccggacc tgaccagccg cggttacgcc tgtaaaatcc gctgcgtttg aattcccagc
      361 ccctcaacgc cgagtcgcat cacgtcgcct ggctgcagga acaccggctc tggctttatg
      421 cccgagccca cgccaggtgg cgtgccggtg gcgatcacgt cgcccgcatg cagcgtaatg
      481 aagtggctga cgtaactgac cagtttccgc accccaaaaa tcatggtttg cgtgctgccg
      541 ttttgcatct tcttgccgtt aacctcagtc cacagcgcga gattttgcgg gtccggcacc
      601 tcgtccctgg ttaccatcca ggggccggtc ggcccgaatg tgtcggcacc tttccccttg
      661 tcccaggtac cgctgcgctc gagctgaaat tcgcgctcgg agacgtcatt acacacacaa
      721 tagcctgcga catggttcat cgaatcggcc tcgctgacat agcgggccgt ggtcccgatt
      781 acgatgccaa gctcgcattc ccagtccagc tttttcgact ccctcggccg catcacgtcg
      841 tcgttcggtc cgcagaaagc ccccagtgac ttgaggaaaa tgattggctc cttcgggacc
      901 ggcatcccgg cctctgcagc gtgatcggcg tagttaagtc caatgcaaat gtaattcact
      961 ggccgcacca cgcaggggcc gatcctcgga ttgccctcga cccgaggcag tgacatcgga
     1021 ttgatccccg ccagcatctt cagcgacgcc ggcgagagtg cgaagccatc gatgtcccgc
     1081 acgaccccgc cgaggcagcg gatcgcccca tcctgatcca gcatgccggg tgtctcggca
     1141 ccggccgggc cataacgtaa tagtttcatg gtggtccccc ctaacgatca aagtgtcagc
     1201 ccgccatcga tcacaacagc ctggccggtg atgaattgtg cagcatccga agccagataa
     1261 acagccagcg cagcgatttc ctccgccgat cccagacgcc ccatcggctg gcgcgcaatg
     1321 aacgcctcgc gcgccgcctc gaccgatccg gcaacggcgg cattcaccgc aatgcgttca
     1381 tccaaactcg gtgtctgcac cgttcctggg cataggcaat taatcctgac gccacgcgtc
     1441 acgtaatccg ccgccaccga gcgagtcatc ccgatgacag ctgctttggt cgccgaatag
     1501 atgaaccgcg acggcacacc cttcaggctc gacgcgaccg aggccatgtt cagaatcacc
     1561 ccatggccgc gttccagcat ccccggcaga aaactacgca tggtgcgaaa catcgagcga
     1621 cagttcagct cgaaagcgaa cgaccactcg tcgtcggtcg cctccagcac ggtgccctga
     1681 ggcacgaacc cggcgcagtt gaacaagatg tcgaccgctc ccgcatcgcg ggcggcgcgc
     1741 tcgatatcgt cagcgtgcaa cacgtccagt ttcgcgatcc ggatggcgtc ggaggcaata
     1801 ccgtggacct tcgcttcgtc gacatcggtg gcgatcacgt gtgccccggc ggcagcaaag
     1861 gcaagtgcgg tggcccggcc aattccctga ccggcggcag taacaaacgc ggtctttcca
     1921 gcgagtgcag cggtcatgag agtgtctccg tttgcatccg acaaacacct acgcctgttg
     1981 tcatggcagt gccatgcccg cgcctggtcg ccaaaaggca agctttgtgt tggtcaatga
     2041 aataattcga gattggagtt aaatttcgct cggtcatcag cgtacttccc tcgtcacggg
     2101 cgcgtacctg tgtcg
//
LOCUS       DATAVD010001206         4376 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1045293, whole genome shotgun sequence.
ACCESSION   DATAVD010001206 DATAVD010000000
VERSION     DATAVD010001206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4376
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1045293"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..983)
                     /locus_tag="VHX39_23035"
     CDS             complement(<1..983)
                     /locus_tag="VHX39_23035"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CmpA/NrtA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX3994058.1"
                     /translation="MTTRVRIGMLRLTDSAPVLVAKARGLFRTFDLDPVLSVKPSWDN
                     LATRLTDGLLDAAVMLPPLALASAMGLRGPAVPLIVPMGLSQGGNTIVLGADAMREPV
                     GLPPGARLVAWLAEQKSRPRIAVVHQYSTHNLLLRYWLALTGIDPDHDIETVVVPPEH
                     VVAALANGQIAGFCAGAPWGMQAELAGVGKVLLGTSDIWPFHPEKCLAVRDGWAGANP
                     DALTRLLRALMRAQAVCDQPEAAEDIVALLADETGLDLPRESARATLPGGSSHEQIHF
                     HGADAAFPAVPHAAWFLRQMRRWGWLAEGTDIVRAARKVYRPDLFSLAARM"
     gene            1310..1834
                     /locus_tag="VHX39_23040"
     CDS             1310..1834
                     /locus_tag="VHX39_23040"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX3994059.1"
                     /translation="MMFRGFFAGVLVTIVVILVCGYFGLREGIVPANADATPSWLETW
                     AAKTSLDASLHNEAPTTPNPVALNDENLIAGIDLYGQHCAICHGTAKGETSASPLAKG
                     LYPQPPQLSSEGVEDDSEGITFWKVKHGIRWTGMPSWRDTLNDQQIWTVALFLKHMDK
                     LSPAAQQAWDKVGN"
     gene            1905..3308
                     /locus_tag="VHX39_23045"
     CDS             1905..3308
                     /locus_tag="VHX39_23045"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane dipeptidase"
                     /protein_id="HEX3994060.1"
                     /translation="MRLNWHDLNSAQAESADGTIVEIDGFPAAVLPSLHATRFMLTFE
                     PGCCPGCLPRDRTASIEVFAASPIPMRGQSLRLSGRWRVQHDDLAGWRYQLHGARLLE
                     PPGWRSVSRRNVLAAGPLMCLAACASANAQQTTPQQQSDARLALEAGPSVDLHSHAGG
                     LASPRRIRDGGPFGAVARPMQQGGMAAICLAVVSDGPTHRVMADGRIHPYRQPDPGEL
                     YEFGQLAFGRVHELSRNQGLTLIKDRAGLRAARAGTTSAIIAAEGADFLEGQVDRVDE
                     TYAKWSLRHLQLTHYRVNELGDIQTEPPVHGGLTDVGAEVIRRCNRLGIVVDVAHGTY
                     DLVVRAASVTSKPLVLSHTSLSASPVRYSRRISPEHARVIAGTGGVVGVWPPAQEFGS
                     LTAMATGMARMVDAAGIDHVGLGTDMRGLVGPSILPDYDQLPGLAEALIGVGFSVPDT
                     TKLLGGNYARVFDACMV"
     gene            complement(3324..4127)
                     /locus_tag="VHX39_23050"
     CDS             complement(3324..4127)
                     /locus_tag="VHX39_23050"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014457234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX3994061.1"
                     /translation="MQPGQRLLGKVAIITGGASGIGEETARLFADHGASVVLCDVQDD
                     LGRSVAHEITDGGGAAEYRNLDVCNENKWIALIGDVERKYGKVDILGNIAGISGRPAG
                     VTVQASGVMTGMALADQTLESWNRIMEVNATGVFLGTKHVIPAMQRAGGGSIVNISSI
                     CGIVGSFANAAYHASKGAVRIFSKSAAVQYAKDQIRVNSVHPGFVDTPMARPGLLGNE
                     SGKARMDATPLGRFGKPIDIAYGCLFLASDESSWMTGSELVIDGGMTAN"
     gene            complement(4156..>4376)
                     /locus_tag="VHX39_23055"
     CDS             complement(4156..>4376)
                     /locus_tag="VHX39_23055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994062.1"
                     /translation="SLLRPGGVVIMSLRYGPVPQGRRMFVVSVEETIRLASAEGLRCI
                     LKLEAQRGTLLRPGVSWARLAFRKDQDG"
BASE COUNT          838 a         1412 c         1325 g          801 t
ORIGIN      
        1 tccattcgcg ccgccaaaga aaacagatcc gggcgataaa ccttacgggc tgccctgacg
       61 atgtctgttc cctcggccag ccaaccccaa cggcgcatct gccgcaggaa ccatgccgcg
      121 tgcgggacag ccggaaatgc agcatcggcg ccatggaaat gaatttgttc gtgactcgat
      181 ccgcctggca gagtggcccg cgccgattct cgcggcaaat ccaacccggt ttcatccgcc
      241 aacagggcca cgatgtcctc cgctgcctca ggttggtcgc agactgcctg tgcccgcatc
      301 aaggcacgca gcagccgggt caaggcatcg ggattggcgc ccgcccaacc gtcgcgaacg
      361 gcgaggcact tctccgggtg aaatggccaa atatcggagg tgcccagaag caccttccca
      421 acgcctgcca attcggcctg catgccccac ggagcgccgg cgcagaaccc ggcgatctgc
      481 ccgttggcca gcgccgcaac cacgtgctcg ggtgggacga cgacggtttc gatgtcgtgg
      541 tccggatcga tcccggtcag tgcgagccag taccgcagca acaaattatg cgtggaatac
      601 tgatgtacga ccgcaatacg aggccgggat ttttgctccg ccaaccaggc gaccaatcgc
      661 gcccctgggg gcaaaccgac cggctcacgc atggcatcgg cacccagtac gatcgtgtta
      721 ccaccctgcg acaatcccat cggcacgatc agcgggactg ccggaccgcg caaacccatc
      781 gccgatgcga gcgccaaagg cggcagcatc actgcggcgt ccagcagccc gtcggtcaac
      841 ctggtcgcga gattgtccca cgaaggcttg acggacagaa ccgggtccag gtcgaaggtg
      901 cggaacaggc cgcgcgcttt tgccaccagg acaggtgctg aatcggtcaa ccggagcatt
      961 ccaattctga cccgcgtcgt catggtgtgc cctctccata ccgccccgta aacctacagc
     1021 aagaacgagc ccgactgtgc tgcggtgcaa cataacaccc ttccaggccc ggcgcgcaag
     1081 tccactgacg ctgccggtgc ggctttggat tccgtcccgg ccaattgttc ctgccacggc
     1141 tagaggaggg caggtggggt aacgcccaat tgtgcctggc cactcgcaac caaagtcgcc
     1201 aggcccggtt ccatcacaag ccggcggcac gcaggtatcg tgacgagcgc ttcggctctt
     1261 gaggtcagtg cacctgattg gcaaactatc cgccaaacta cggaggaaca tgatgttcag
     1321 agggtttttc gccggtgtcc tggtgacaat cgtcgtcatc ctggtctgcg gttatttcgg
     1381 cctgcgtgag gggattgtgc ctgccaatgc cgacgcgacc ccctcgtggc tcgaaacctg
     1441 ggctgcgaaa acttcgcttg acgcatcgct gcacaacgaa gccccgacca cgccaaaccc
     1501 ggtcgcgttg aacgacgaga atctgatcgc cggcattgat ctgtacggac aacactgtgc
     1561 gatctgtcac ggcaccgcga aaggcgagac gtcggcctcg ccgctggcga agggtctcta
     1621 cccgcagccg ccgcaattga gctcggaagg tgtggaagac gattccgagg gcatcacatt
     1681 ctggaaagtg aaacacggca ttcgctggac cggcatgcca tcgtggcggg atacgctgaa
     1741 tgaccagcag atttggaccg tggccctgtt cctgaaacac atggataagc tatcgcctgc
     1801 cgcgcaacag gcgtgggata aggtcggcaa ttgacgttga taacaaacgc aggtgcgatg
     1861 accaccaatt tagtaatcgc gccaacggcg aggagcgggt caatttgcgg ctgaactggc
     1921 atgacctgaa cagcgcgcag gccgagtccg ccgacggcac catcgtcgag atcgacggat
     1981 tcccggccgc cgtgctgccg tcactgcacg cgacccgctt catgctgacc ttcgagccgg
     2041 gctgctgccc agggtgcttg ccgcgcgacc ggacggcatc gatcgaggta tttgccgcct
     2101 cgccgatccc catgcgaggc cagtcgctgc gcctgagcgg tcgctggcgc gtgcagcacg
     2161 acgacctggc cggctggcgg tatcaattgc atggcgctcg cttgctggag cccccgggat
     2221 ggaggtcggt tagtcggcgc aatgtgttgg ccgccggccc gctgatgtgt ctggcggcct
     2281 gtgccagcgc gaacgcccaa caaacgacgc cgcagcagca gtccgacgcg cgactggcgc
     2341 ttgaggctgg accgtccgtg gacctgcaca gtcatgccgg cggtttggcc agccctcggc
     2401 ggatacgcga cggtgggccg tttggcgcgg ttgcgcgacc catgcagcag ggcgggatgg
     2461 cggcgatctg ccttgccgtg gtgtccgacg gaccaacaca tcgggtcatg gccgacggac
     2521 gcattcatcc gtatcgccag ccggatcccg gcgaactgta tgagtttggc cagttggcgt
     2581 ttggccgggt gcacgaactg tcacgcaatc agggcctcac gttgataaaa gatcgtgccg
     2641 gtttgcgtgc cgcgagggcc ggcacaacgt cggccatcat cgcggccgag ggcgccgact
     2701 ttctcgaggg ccaggtcgac cgggtcgacg aaacctatgc caaatggtcg ttgcggcatt
     2761 tgcaattgac gcactaccgc gtgaacgaat tgggtgacat tcagaccgag cctccggtgc
     2821 atggcggtct gaccgatgtc ggggcggagg tcatccggcg ttgcaatcgg cttggcatcg
     2881 tcgttgatgt cgctcacggc acgtatgatc tggtcgtgcg cgccgcctcc gtcacctcaa
     2941 agccactggt gctgtcgcac acttcgctat cggccagtcc agtccgctac agccgccgca
     3001 tttcgccgga gcacgcgcgg gtcattgcag gaaccggagg cgtggtcggc gtttggccgc
     3061 cggcgcagga gttcggctcg ctcaccgcga tggcgaccgg tatggcgcgg atggtcgacg
     3121 ccgccggcat cgatcatgtc ggtctgggca ccgacatgag gggtttggtc gggcccagta
     3181 tattgccgga ctacgatcaa ttgcccgggt tggcggaggc gttgatcggc gtcggattct
     3241 ccgtccccga cacaaccaaa ctactgggcg gcaattatgc ccgggtgttt gacgcgtgca
     3301 tggtgtgagc ctcgaacaac gtcctaattc gcggtcatcc caccgtcgat caccagttcg
     3361 ctgcccgtca tccacgacga ttcatcggaa gcaaggaaca gacacccgta agcgatgtcg
     3421 attggtttgc cgaaccgtcc caacggcgtc gcgtccatgc gtgccttgcc gctctcattg
     3481 ccgagcaatc ccggtcgcgc cattggcgta tcgacgaaac cgggatgcac ggaattcacc
     3541 ctgatctggt ctttggcata ttgcacggcg gccgacttcg aaaagatccg caccgcgcct
     3601 ttcgacgcgt gataggcggc attggcgaag gaaccaacaa tcccgcaaat cgaggaaatg
     3661 ttgacgatcg acccgccgcc ggcccgttgc atcgccggaa taacgtgttt ggtgccgagg
     3721 aacacgccgg tcgcattcac ctccatgatc cggttccaac tttccagcgt ctgatctgcg
     3781 agtgccatac cggtcatcac cccgctcgcc tgcaccgtca cgccggcggg ccgtccggag
     3841 atcccggcaa tattgcccaa tatgtcgacc ttgccgtatt tgcgctcgac gtcaccaatg
     3901 agggcgatcc acttattctc attgcaaaca tccagattgc ggtactcggc cgccccgccg
     3961 ccgtcggtaa tctcgtgcgc caccgagcgg ccgaggtcgt cctgcacatc gcacagcacc
     4021 acgctcgcac catgatcggc aaacaggcgt gcggtctcct cgccaatgcc ggaggcaccg
     4081 ccggtaataa tggccacttt gccgagaagc cgttggcctg gttgcatgat cgatcctcct
     4141 gttggttttt gaaaatcagc cgtcctgatc cttgcggaat gccaaccgag cccaactcac
     4201 ccccggtctg agcagcgtcc cacgctgcgc ctcgagcttc aatatgcaac gtaagccttc
     4261 tgcgctggcc aggcgtattg tttcttcaac agaaacgaca aacatgcggc gcccttgcgg
     4321 taccggcccg tagcggagcg acatgatcac tacgccaccg ggccgcagca acgacg
//
LOCUS       DATAVD010001207         5225 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3653556, whole genome shotgun sequence.
ACCESSION   DATAVD010001207 DATAVD010000000
VERSION     DATAVD010001207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5225
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3653556"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..1734)
                     /locus_tag="VHX39_23060"
                     /pseudo
     CDS             complement(1..1734)
                     /locus_tag="VHX39_23060"
                     /inference="COORDINATES: protein motif:HMM:NF015904.4"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
     gene            complement(2016..2687)
                     /locus_tag="VHX39_23065"
     CDS             complement(2016..2687)
                     /locus_tag="VHX39_23065"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HEX3994063.1"
                     /translation="MPDFNIGFVIFPNLTQLDFTGPLQVLNRVPNSKTHIVARSLDPV
                     PSDCGLSLVPTVSFADCPQLDLICVPGGAGVVQAMTDHATVDFVRRQAEGARYITSVC
                     TGAFVLGMAGLLQGRRATTHWAYTDLLPRTGAIFEKGRVVWDGNVVTAGGVTSGIDFA
                     LQIVAALAGEDVAQSIQLSIEYDPSPPFGSGHPDRAPAAIRQSVTAGFTKRREIYAAA
                     LPVAG"
     gene            complement(2742..5108)
                     /locus_tag="VHX39_23070"
     CDS             complement(2742..5108)
                     /locus_tag="VHX39_23070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3994064.1"
                     /translation="MADGSGTTGIGAPVRRVEDQRLLTGQGRYSDDLTLPGQAYAAML
                     RSPHAHAEIESIDTSRAANVDGVFAVLTGQDMLADGLLPIPHAVWSGHPAEIPLPNTD
                     GSAASGPSHFCMATTIARHVGDIVAVVIANSTATAHDAAEQIAVAYRPLPAVTHAPLA
                     VRPGAAHAWHEGASNVCIDSLLGDAAATDAAFSQAAHVARLQTWVQRVAGVPMEPRAA
                     IGVYDAQNRKYTLHAGAGGAIRPRNDLAAILGVPQSDVRMVMHDVGGNFGTRGAFNPE
                     FALVVWAARRIGRPVKWTSDRSEAFLCDYQARDLAVTAELAVDASGKFLALRCDNLVN
                     LGAYPVGFSPLQKGAAIVSSIYHVPVVQVRARGAFTNTAPTRPYRSAGRPEVMYVMER
                     LIDLAARQSGIDRIELRRRNLVPESAMPYRNPFGLIYDSGAYHQVMETALRVGDWTGF
                     PARQAAAATRGKCRGIGIANYVDTATGVPRERAEITVKPEGIVEVVVGTGSQGQGHET
                     SFAQLINEWLGVPNECVRLVTGDTDRVIWGGGAHSGRALRLGSIVMHTASVEIIEKAT
                     RIASHVLEADRSDLIFADGRFTVAGTDRAIGLFEVAAAALTRNDLPDDLAGALDAISD
                     QTIKEASFPYGCHVCEVEVDPETGVVTVAKYTAVDDVGRAVNPMIVHGQVHGGIAQGV
                     GQALWEQVVYDRTTGQMITGSFMDYAMPRASGLPFYVTELSEIPSPTHPLGIRPAGEG
                     GTTPALGVVVNAIVDALSGYGVTHIEMPATSERVWQAIRTATAPPRPG"
BASE COUNT          956 a         1618 c         1643 g         1008 t
ORIGIN      
        1 gaacaggccg ccgcccgcca gcagtggcac gatcgacagc atcttggccg aggtgccgag
       61 ctccatgatc gggaacaaat cggtcaggta gtcgcgcaac acgttcccgg tgacggagat
      121 cgtgtcctgc cccttgcgga tgcgctcgag tgaaaacctg atcgcctcga ccggtgccag
      181 gatgcgaatg tcgagcccct aggtgtcctc ctccttcagg tatgtctcga ccttggcgat
      241 caactgcgcg tcatgcgcgc ggttcgggtc gagccagaac accgccggtg tgttggtgag
      301 gcgggcccgg cgcaccccga gtttgaccca gtcccggatc ggcgcgtctt tgacctggca
      361 catgcggaaa atgtcgccgg tttcgaccgg ctgtgacagc agaaccgtgc cgtcatcggc
      421 gacgacgcgg accgttccgc ccgtggaaac ctcgaacgtc ttgtcgtggg agccgtattc
      481 ttcggcctgc tgcgccatca accctacgtt gggcaccgat cccatcgtcg tcgggtcgaa
      541 agcgccgtgc gccttacaat cctcgatggt ggcctgaaac agcgtagcgt agcagcggtc
      601 cgggatcgtg gcgatggtgt cgtgcagctt accgtcggca ccccacatgt gccctgattc
      661 gcggatcatt gccggcatcg acgcatcgat gatcacatcg cttggcacat gcaggttggt
      721 gatgccgcgg tcggaattca ccatcgcaag gcccggccgt ttggcgtagg tggcggcgat
      781 gtcggccttg atcgctgtct tttcggcggc cggcagggtc tcgatccgcg tcagcatgtc
      841 gcccaggccg ttgtcgggat cgacacccag gcgggtcagc gtagcggcgt gcttctcgaa
      901 cacatcggcg aagaacaccg aaaccgcatg accgaaaatg atgggatcgg agatcttcat
      961 catggtcgtc ttcacgtgca gcgagaacag cacgtcttcc tgcttcgcgg cgtcgatctg
     1021 cgcggtgaag aaggcacgta acgccttacg gttcatcgtc gacgcgtcga tgatctcgcc
     1081 ggcccgtagc ggcgtcttcg ccttcagcac cgtgactgcg ccatcgctgc cgaccagttc
     1141 gatacgggcg ttggttggcg ccgcaaccgt agtggcgact tccgagccgt aaaaatcgcc
     1201 gctcgccatg tgggccacat gcgttttgga gttcgcgctc caggcgccca tcttgtgtgg
     1261 atggtggcgc gcgtactgct tcacggcgcc ggcggcgcgg cggtcggaat tgccctcacg
     1321 cagcaccgga ttgacggcgc taccgagcac cttgccatag cgggtgcgga tttccttatc
     1381 ggcgggcgtc gcatcgctgt ccggatagtc cggcacgtca tagcccttgt cctgcaattc
     1441 cttgatcgcg gctttgagct gcgggatcga ggcggagatg ttgggcagct tgatgatatt
     1501 ggcctcgggc cgcatcgcga gctggccgag ttcggcgagc tcgtcgttaa ctcgttgcgc
     1561 tggcgttagt ttctcgggaa aattggcgat gatgcggcca gtgagcgaaa tgtccttcag
     1621 cttcatcgtc acgccggctg tggcgacgaa ggcttcgacg attggcagca gcgagaacgt
     1681 cgcgagcccc ggcgcttcgt cgaccttggt ccaaacaatt tcgagatctg acatgcttac
     1741 acctctggga gccgggctgg tttcggctga gttcaactat caacaaattc ggcgttttgt
     1801 cgcatcggcg tgcgggaagg gcaagccggg ggcggtccca tgctcgggtc atcttccgga
     1861 gatgagaaag agccgagaac cgatcctacc agatccgaag ccggtccgca cagcctttcc
     1921 gattgatagt cgtcgccgtg cgcacccgat tggatcgaca acacgacgtc gacgctcctt
     1981 tgtcgtggac gaacaatctg tcgcagaccg gggtgtcagc ctgctaccgg caaggctgca
     2041 gcataaatct cccggcgttt ggtaaagccg gcagtgacgc tctgccggat cgcggcggga
     2101 gcacgatccg gatggccgga gccaaacggc ggggagggat cgtactcgat gctcagttgt
     2161 atcgactggg cgacatcctc cccggcgagt gcggcgacga tctgcagcgc aaaatcaatg
     2221 cccgaggtca cgccgccagc ggtcaccaca ttgccatccc acaccacacg tcccttttcg
     2281 aatatcgctc ccgtcctggg cagcagatcc gtgtaagccc agtgtgtggt cgcccggcgg
     2341 ccttggagca ggccggccat gccgaggacg aaggctccgg tgcaaaccga ggtgatgtaa
     2401 cgtgcgccct ctgcctgacg cctgacaaag tcgacggttg cgtggtcggt cattgcctgc
     2461 acgacaccgg ctcctcctgg cacgcagatc agatccagtt gtggacagtc ggcgaacgac
     2521 acggtgggaa ccagagacaa tccacaatcg ctcggcactg gatcgagcga cctggcaacg
     2581 atatgggttt tcgaatttgg cacccggttc agcacttgca gcggtccggt gaaatcgagc
     2641 tgcgtgagat tgggaaatat cacgaagcca atattgaagt caggcatttg cactctccgc
     2701 agattgacgt gtggttcggt taccgcctga cggttggcgg tttatccggg cctgggcggt
     2761 gccgtcgcag tccgaatcgc ctgccaaacg cgttccgaag tggcgggcat ttcgatatgg
     2821 gtgacgccat agcctgacaa cgcgtcaacg atcgcattca ccaccacacc aagcgccggc
     2881 gtcgtgccgc cttcgccggc cggccggatg cccaggggat gtgtagggga gggaatttcg
     2941 ctgagctcgg tcacatagaa cggcaggcca gaggccctcg gcattgcgta gtccatgaac
     3001 gaaccagtga tcatctgacc cgtcgtgcgg tcgtagacga cctgctccca caacgcctga
     3061 ccaacaccct gcgctatccc gccatgcacc tggccatgca cgatcattgg gttgaccgcc
     3121 cgcccgacgt cgtcgacggc ggtgtatttc gcgaccgtaa ccacacccgt ttcgggatcg
     3181 acctcgacct cgcagacatg gcaaccataa gggaaacttg cctccttgat ggtttggtcg
     3241 ctgatcgcgt cgagtgcgcc agcaaggtcg tccggcagat cgttgcgggt caatgcggca
     3301 gcggcgacct cgaacaaacc gatcgcgcgg tcggtcccgg caacggtaaa gcggccgtcg
     3361 gcaaagatga ggtccgaccg atcggcctcc agcacatggc tggcgatcct tgtcgccttt
     3421 tcaatgatct cgacggatgc agtgtgcatc acgatcgaac ccagtcgcaa cgcgcgaccc
     3481 gagtgcgcgc cgccacccca gatgacccga tcggtatcgc cggtcaccag ccggacgcat
     3541 tcattgggga cgcccaacca ttcgttgatg agttgggcaa agctggtttc gtgcccttgg
     3601 ccttgtgacc cggtgccgac aacgacttcg acaatcccct cgggtttcac agtgatctcc
     3661 gcccgttcgc gaggcacgcc cgttgcggtg tcgacatagt tggcgatgcc aatgccccga
     3721 catttgccgc gcgtcgccgc tgccgcctgg cgggcgggaa atcctgtcca atcgcccact
     3781 cgcaaggccg tttccatgac ctggtgatac gcgccgctgt cgtagatcaa cccgaatgga
     3841 ttgcgatacg gcatggccga ctccggaacc agattgcgcc ggcgcagttc gatccgatcg
     3901 atgccgcttt gccgtgcggc gagatcgatc agacgctcca tcacgtacat gacctccggc
     3961 cggccggcgc tgcgataagg ccgggttggt gcggtattgg taaacgcacc gcgggcacgg
     4021 acctgaacga ccggcacatg ataaatgctg gaaacgatgg cagcgccttt ttgcaatgga
     4081 ctgaagccga ccggatacgc gcccaggttg accaggttgt cgcaacgcag cgcgaggaat
     4141 tttccgctcg cgtccaccgc cagttcagcg gtcaccgcga ggtctcgggc ctgataatcg
     4201 cacaggaagg cttcggatcg gtcgctggtc catttcactg gccgtccgat ccggcgagca
     4261 gcccagacca caagggcgaa ctcgggattg aacgcgcctc ttgtgccgaa attgccgccc
     4321 acgtcgtgca tgaccatgcg gacgtcggat tggggtacgc ccaatatcgc tgccagatcg
     4381 ttgcgtggac gaattgcccc gccagcgccg gcgtgcaggg tgtatttgcg attctgcgcg
     4441 tcgtacacac caatcgctgc acgcggttcc atcggtacgc cggccacccg ctgaacccat
     4501 gtttgcaatc gcgcgacatg tgcggcctga ctgaacgcgg catcggtcgc cgcggcatcg
     4561 ccgagaagcg agtcgataca aacattcgac gctccctcat gccaggcgtg cgctgcgccc
     4621 ggcctgactg cgagcggtgc gtgcgttacg gccggcagag gtcgatacgc gacggcaatc
     4681 tgttcagccg cgtcatgcgc ggtggcggta ctgttcgcga tgaccacggc cacgatgtcg
     4741 ccgacatggc gagcgatggt cgtggccatg caaaagtgcg aggggccgga tgcggcggag
     4801 ccatcggtat taggcaacgg gatttcggcc gggtgacccg accaaaccgc atgtgggatc
     4861 ggtagcaggc catccgccaa catgtcctgc ccggtgagca cggcgaagac gccgtccaca
     4921 ttggcggctc ggcttgtgtc aatcgactca atttcggcgt gtgcgtgcgg agatctcagc
     4981 atcgctgcat acgcctggcc gggcagtgtg aggtcgtcgc tatagcgtcc ctggccggtc
     5041 agaagtcgct gatcttcgac gcggcgcacc ggggcaccaa ttccagtggt tccgctgcca
     5101 tcagccatgg acgcctcctg tcttaccgca attgagggag gctagcacaa gctgcagcaa
     5161 acggcgcagg ctacgggggg cggttcaccg aggacaacag gggtttgccg gcgttgaccc
     5221 cgata
//
LOCUS       DATAVD010001208         2021 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_487126, whole genome shotgun sequence.
ACCESSION   DATAVD010001208 DATAVD010000000
VERSION     DATAVD010001208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_487126"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..438
                     /locus_tag="VHX39_23075"
     CDS             <1..438
                     /locus_tag="VHX39_23075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994065.1"
                     /translation="VCGTRDPLLIGRLDDFLDSVRSEVSTKAAAFGATPDSYQLGIRV
                     YGRDGVMGAREPSRNALPHELGFVIEVVARDNQEIASAVLGMARTNMLHTDFPGRLCR
                     EGNMAFPFSPSDIDVGPVYRFSVFHVAELDDPTELFPIEFETV"
     gene            440..751
                     /locus_tag="VHX39_23080"
     CDS             440..751
                     /locus_tag="VHX39_23080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4387 domain-containing protein"
                     /protein_id="HEX3994066.1"
                     /translation="MSLIRDVARVCKSKNAGPFELTIDVVFDDAETFRRVKATGVLCP
                     ALFARLYNVPEQHVLFTPYDAAFAFKATLPRLVPSGDFGDTDVYGCQQHAPLLDVDLP
                     I"
     gene            768..>2021
                     /locus_tag="VHX39_23085"
     CDS             768..>2021
                     /locus_tag="VHX39_23085"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434969.1"
                     /note="This protein belongs to a clade of FMN-dependent
                     monooxygenases, within a broader family of
                     flavin-dependent oxidoreductases, the luciferase-like
                     monooxygenase (LMM) family, some of whose members use
                     coenzyme F420 rather than FMN; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NtaA/DmoA family FMN-dependent monooxygenase"
                     /protein_id="HEX3994067.1"
                     /translation="MASRMMTLIAFLQAQNCSNLPGSWRHPATTLDFLTPEYYQRIAR
                     VLEEGKIQMAFFDDRLALPDRYTDNHAEAVNAGVRAVKLDPCTVLMAMGMATTRLGLG
                     ATYSTTYYEPYHVARVFATMDLMLKGRAAWNIVTSLNSGEALNFGGEKHLEHDARYDR
                     ADEFMDVVMGHWNTWEDDALILDKEGNRFADASKVHRLDHNGPWFSSRGPFSVPRSPQ
                     GHPVLIQAGQSGRGQEFAARWAELVFVIHHNLDAGKKHYAAFKAAVAAAGRDPAAVHV
                     APACYVCVAETEAAAQEKRAIVEATARPVDALVLISEVTNYDFSKKPYDEPLSDEELA
                     ELSWHGFRDRVVQFSGKANPTVRDFVEVSGRGTVKEHKMFVGTPKQVADQMEEWFVAP
                     ACDGFVLAATHMPGSYEDVVRLLVPE"
BASE COUNT          402 a          594 c          621 g          404 t
ORIGIN      
        1 gtttgcggca cgcgcgatcc gttgctgatt gggcggctgg acgattttct cgacagcgta
       61 cgatccgagg tgtcgaccaa ggcagccgcg ttcggggcaa caccagactc gtatcagctt
      121 ggcatccggg tttatggccg tgacggcgtc atgggcgccc gggaaccctc ccgcaacgcg
      181 ctaccgcatg aactgggctt tgtcatcgag gtcgtggccc gcgacaatca ggaaatcgcc
      241 agtgcggtgc ttgggatggc gcggaccaac atgctgcaca cggattttcc cggccggtta
      301 tgccgcgaag ggaatatggc gtttccgttc tcgccttccg acatcgatgt cgggccggtg
      361 taccggttca gcgtgttcca tgtcgcggaa ctggacgatc cgaccgagct gttcccgatc
      421 gagtttgaga cagtttgata tgtccctgat ccgcgatgtc gcccgcgttt gcaaaagcaa
      481 gaatgccggg ccgttcgaac tgacgatcga cgtggtgttc gacgacgccg agacgttccg
      541 ccgggtcaaa gccacaggcg tgctgtgccc cgcattgttc gcccgactgt ataacgttcc
      601 cgaacagcac gtgctgttca cgccttatga cgcggccttt gcgttcaagg caaccttgcc
      661 gcgcctcgtt ccatcgggcg actttggcga taccgacgtc tatggctgcc agcagcacgc
      721 gccattgctg gatgtcgatc tgcccatctg aaagcgagtt ttccccaatg gcttcccgaa
      781 tgatgacgct gatcgccttc ctgcaggcgc agaactgttc caatctgcct gggtcatggc
      841 ggcatcctgc gacaacgctg gatttcctga caccggaata ctaccagcgc atcgcccgcg
      901 tgctggagga aggcaagatc cagatggcgt tcttcgatga tcgcctggca ctcccggacc
      961 gctacaccga caaccacgca gaggcggtca acgcgggcgt gcgcgcggta aaactggatc
     1021 cgtgcacggt cctgatggcc atgggaatgg cgaccacgcg actcggtctg ggagcgacat
     1081 attcgacgac ctattacgag ccgtaccacg tggcccgggt cttcgcgacg atggacctga
     1141 tgctgaaggg gcgtgcggcg tggaacatcg tcacgtcact caacagcggc gaggcattga
     1201 atttcggcgg cgaaaaacac cttgaacacg acgcgcgcta tgaccgcgcc gatgagttca
     1261 tggacgtggt catgggtcat tggaacacct gggaagacga tgcgctgatc ctggacaagg
     1321 aaggtaatcg ctttgccgat gccagcaaag tgcaccggtt ggatcacaac ggaccatggt
     1381 tcagttcacg tggaccgttc agcgtaccgc ggtcaccgca agggcatccg gttttgatcc
     1441 aggccggcca gtcaggccgg ggccaggaat ttgccgcccg atgggccgaa ctggtgttcg
     1501 tcattcatca caacctggac gccggcaaaa aacactacgc cgcattcaag gcggcggtcg
     1561 ctgcggcagg ccgcgatccg gcagccgttc atgtcgcgcc ggcctgttac gtttgtgtcg
     1621 cagaaaccga agcggcggca caggaaaaac gggcgattgt cgaggcaacg gcgcggcccg
     1681 tcgatgcgct cgtactgatt tccgaagtta ccaattatga cttttcgaag aagccgtatg
     1741 acgaaccgct cagcgatgag gagctggccg aattaagctg gcacggcttc cgcgatcgcg
     1801 tggtgcagtt ctccggcaaa gccaatccta ccgttcgcga cttcgttgaa gtttccggcc
     1861 gcggcacggt gaaagaacac aaaatgtttg tcggcacacc gaaacaggtg gccgatcaaa
     1921 tggaggagtg gttcgtcgca ccggcctgcg acggtttcgt actcgcagcg acgcacatgc
     1981 cgggctcata tgaagacgtg gttcgtctgc ttgtcccgga a
//
LOCUS       DATAVD010001209         1530 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_675567, whole genome shotgun sequence.
ACCESSION   DATAVD010001209 DATAVD010000000
VERSION     DATAVD010001209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_675567"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..832)
                     /locus_tag="VHX39_23090"
     CDS             complement(<1..832)
                     /locus_tag="VHX39_23090"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3994068.1"
                     /translation="MLDTSPASAENSFDVVVVGGGPAGSTVATLLARRGERVLLVEKE
                     RHPRFHIGESLLPMNLPLFDELGVGDEIARIGIPKYGVEFVSPYHPDPSNFDFAQGWD
                     KRFASAYEVRRSEFDQVLFRNAAAAGAQTLEGCRVTAVEFPEPGRVIASARTDDGQEH
                     QFQSKFLVDASGRDTLLANKLARKISNRHHHSAAVYGHFTGARRLPGKAEGNISLFWF
                     DHGWFWFIPLRDGTTSVGAVCDADFIKTRNTDVASFFKKVIAMSPALSDRLSDAQMTG
                     P"
     gene            949..>1530
                     /locus_tag="VHX39_23095"
     CDS             949..>1530
                     /locus_tag="VHX39_23095"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX3994069.1"
                     /translation="MAQQIEDLAAFVATARHDDVPAAVRDHTKLVLLDTLGVILAGSA
                     RPEVEQLRDRLSGGTGATVYARGWPVQDARTAALLNGIAGRSIELCEGLRFVSGQAAM
                     QVLPGVLAVAEQTGSSGRELLMALLLGYDVAARLAGGFTPRPLAHQNGQMSLVAAAAA
                     GARLRGLDAAGISRAMRIATTLVLTPSYTNAVAG"
BASE COUNT          292 a          492 c          473 g          273 t
ORIGIN      
        1 ccggtcctgt catctgagcg tcgctcagcc ggtccgataa cgccggcgac atggcgatca
       61 ccttcttgaa gaacgaggcg acgtcggtat ttcgggtttt gatgaagtca gcgtcgcaaa
      121 ccgcgccaac gctggtcgtg ccgtcccgca acggaatgaa ccagaaccag ccatgatcga
      181 accaaaacag gctgatgttg ccttcggcct tgcctggcaa ccgccgagcc ccggtaaaat
      241 ggccatacac agcggcactg tggtgatgcc gattgctgat tttcctggca agcttgttcg
      301 ccagcagcgt gtcgcggccc gaggcgtcga ccaaaaactt cgattgaaac tggtgttcct
      361 gcccatcgtc cgtacgcgcc gatgcgatga cacggccggg ttcggggaat tcaaccgcgg
      421 taacgcggca gccttccagc gtctgagcac cggccgccgc ggcattccgg aacaacacct
      481 gatcgaactc cgaccgccgc acttcatagg ccgatgcaaa ccgcttgtcc cagccttgcg
      541 cgaaatcgaa gttcgatggg tccgggtgat agggcgaaac aaactcgacg ccatattttg
      601 gaatgccgat tcgggcgatc tcgtcgccga caccaagttc gtcgaacagc ggcaggttca
      661 tcggcaacag tgactcgccg atgtgaaagc gcgggtgacg ttccttttca accagcagca
      721 cccgctcgcc ccgccgggcc agcaacgtcg caaccgtaga ccccgctggg ccgcccccga
      781 ccaccaccac atcgaacgaa ttctcggcag aggccgggct ggtatcgagc attggcacac
      841 gtccctcagg aaacagtggt ttccagtttg cgatgtctcg cgtggacggg caaccgaagg
      901 catattctca cgcccgtgat atcacagctc gcaacagagg aggccgccgt ggcacagcaa
      961 atcgaggacc tggcggcttt cgtcgcaacc gctcgccatg acgacgtgcc cgctgccgtg
     1021 agagaccaca cgaagctggt gttgctcgac actctcggcg tcatcctcgc cggcagcgcg
     1081 cggcccgagg tggagcaact gcgcgaccgt ttgtcaggcg gcaccggtgc taccgtctat
     1141 gcgcgcggct ggcccgtcca ggatgcccgc accgccgcat tgctgaacgg catcgccgga
     1201 cgatcgatcg aactatgcga gggcctgcgt ttcgtttcgg gccaggcggc aatgcaagtg
     1261 ctgccgggcg tgctggcggt ggccgagcaa accggcagtt ccggtcgcga actgctgatg
     1321 gcattgctgc ttggctatga tgttgcggcc aggcttgcag gcgggttcac accgcgaccg
     1381 ttggcgcatc agaacggtca aatgtcgctg gtggcagccg ccgctgcggg agcccggttg
     1441 cgcggtctcg acgcggcggg gatcagccgc gccatgcgta tcgcaacgac gctggtgctg
     1501 acaccgagct acaccaatgc cgtggccggt
//
LOCUS       DATAVD010001210         8199 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2347258, whole genome shotgun sequence.
ACCESSION   DATAVD010001210 DATAVD010000000
VERSION     DATAVD010001210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8199
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2347258"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1203
                     /locus_tag="VHX39_23100"
     CDS             <1..1203
                     /locus_tag="VHX39_23100"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEX3994070.1"
                     /translation="VLAYSGGLDTSVILRWLQTTYRCEVVTFTADLGQGEELGPALQK
                     AELFGVKEIFVDDLRETFVSDFVFPMFRANALYEGQYLLGTSIARPLIAQRQIEIAEL
                     TGADAVAHGATGKGNDQVRFELSYYSLKPDIKIIAPWREWDLTSRTKLLEFAEANQIP
                     IAKDKRGEAPFSVDANLLHSSSEGKILEDPAVEADELVYQRTIRPEDAPDQATVIAVD
                     FEHGDPTAIDGVRLSPAALLTRLNELGRANGIGRLDLVENRFVGMKSRGVYETPGGTI
                     LLAAHRSIESITLDREAAHLKDSLMPRYAELIYNGFWFSPERRMLQALIDESQHSVTG
                     RVRLKLYKGNVTCIGRESPHSLYDTSVVTFEDDQGAYDQFDAQGFIKLNALRLRLGAT
                     VGRRGGTL"
     gene            1226..2143
                     /locus_tag="VHX39_23105"
     CDS             1226..2143
                     /locus_tag="VHX39_23105"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:NF025034.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="retropepsin-like aspartic protease"
                     /protein_id="HEX3994071.1"
                     /translation="MTNGRVWLACLLLLLISACAPNPINCDLVVDAQVPLEVHNRLLV
                     VPTGINGKWVKLLVDTGAERTVLSADAVERLGLERDEKTVTRSTGVGGVYTAHDAIIP
                     GLVLGGVRFPVRHVSVGQFRFGPGLTADGLLGSDVLLAFDLDIDVPDRKLTLYRPRLC
                     PDVQPPWNEPFERVPGVKALRDRLLIPLELDGVSGMGILDTGAQATTIGVSMANRLGL
                     TQAAMTGDPVVEHHGAGPGSQDARLHRFGLLQIGPAVAHNPILSVLPIDAGVGDALVG
                     EDFIDGRRIWLSFSNREVFIATSNAGDSQ"
     gene            2306..3289
                     /gene="nadA"
                     /locus_tag="VHX39_23110"
     CDS             2306..3289
                     /gene="nadA"
                     /locus_tag="VHX39_23110"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010503173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HEX3994072.1"
                     /translation="MSMAAALERTAPLYQRVRSVIPPIEWPVFADDIDAILTLKQQRN
                     AVILAHNYQTPEIFHCVADIVGDSLALAREAMTVDADVIVLAGVHFMAETAKMLNPSK
                     TVLIPDLEAGCSLAASITAADVRLMRQKHPGVPVVTYVNSSAAVKAESDICCTSANAK
                     KVVESLGVPEVIMLPDEYLAQNVAAKTYVKIIAWAGHCEVHERFTPKEVRALREDYPG
                     VIILAHPECPPDVVAEADFTGSTADMSNYVGREKPARVVLLTECSMADNVSINHPSVN
                     FVKPCNLCPHMKRITLPKIRRALETMTHEVTIPSDLAFAARRSVERMLAVA"
     gene            3522..4376
                     /gene="nadC"
                     /locus_tag="VHX39_23115"
     CDS             3522..4376
                     /gene="nadC"
                     /locus_tag="VHX39_23115"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HEX3994073.1"
                     /translation="MLVPPLPEIMVEPAVRAALLEDLGRAGDLTTDAIVPADARTHCA
                     LVARQPGVVAGLDFALLAFRLMDPRIEAKIMLPDGSRLKPGDLIATVTGPARGILTGE
                     RVALNFLSHLSGVASATRGIADAIAGTKAQVCCTRKTMPGLRAAQKYAIRVGGGSNHR
                     FGLDDAVLIKDNHVAIAGGVKPAVERARAGVGHLVKIELEVDTLDQLREAMQLRVDAV
                     LLDNMGPDLLREAVSIVSGRAITEASGRIRPETAAAIAASGVDLLSVGWLTHSAQVLD
                     IGLDHRDG"
     gene            complement(4553..5821)
                     /locus_tag="VHX39_23120"
     CDS             complement(4553..5821)
                     /locus_tag="VHX39_23120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX3994074.1"
                     /translation="MLSRRLPTSRLSGALFAAMLLLAGPLTARAEDPITIGFGMALTG
                     GLAPNGKAALFAMQIWEKEINAKGGLLGRPVKLIYYDDQSNPATVPGIYTKLLDVDKV
                     DIAVSGYATNMVAPAMPIMMGHNRTFLSLFGLAVNTEFNYPKYFSFLPIGGLHPKEEQ
                     ARGFFAVAMQQTPKPTTLAIVGADAEFPRNAMDGARVVAKELGLKIVYDKTYPPTTSD
                     YSPIVRAIQATNPDIVLVDSYPPDSVGMIRAANEVGLKTKLFGGGMVGLQSTSIKVQL
                     GPLLNGIVDYDFWLPWSKLASPASLEFLKQYQAEAASKGVDALGYYLPPFAYGYMQVL
                     QQAVESAKSIDDDKLAAALRDGTFHTIVGDVKFGPNGEWVEPRVLEVQFQNLKPNDME
                     QFRNPDTEVILWPPALKTGNIEYPYADVKH"
     gene            5943..6659
                     /locus_tag="VHX39_23125"
     CDS             5943..6659
                     /locus_tag="VHX39_23125"
                     /inference="COORDINATES: protein motif:HMM:NF016627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003839 - gamma-glutamylcyclotransferase
                     activity [Evidence IEA];
                     GO_function: GO:0061928 - glutathione specific
                     gamma-glutamylcyclotransferase activity [Evidence IEA];
                     GO_process: GO:0006751 - glutathione catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HEX3994075.1"
                     /translation="MTNEQPLFRITRETLRDGSLIEAARQRMAPGMRLRTDAEIAACL
                     DTLLAEHPPAEDVWLFGYGSLMWNPAMHFSEMRGGRVLGWHRKYCLWLEAGRGTPENP
                     GLMLGLDRGGQAAGALFRVPADQARAELLLPFRRELFTHSYDPRWVSVATPDGIIRAM
                     TFVVSRAGIGYVRHLDLDRIAHHIATASGALGSCMEYLHNTLEALEALGLDDRMLRQV
                     YRICVARATANQSSQAGRRT"
     gene            6669..7574
                     /locus_tag="VHX39_23130"
     CDS             6669..7574
                     /locus_tag="VHX39_23130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0018576 - catechol 1,2-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0009712 - catechol-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HEX3994076.1"
                     /translation="MVDLDEFTTTDATLEQMANTANPRLKQIMDAAVRHMHAFVRDVE
                     LTPAEWIQGLQFLTAVGQACTPIRQEFILLSDVLGVSAVVNALHDRKAKELGSQSSLL
                     GPFFREGAPELPLGAQIVEKPTAEELVVYGQVADTHGTPVPGALIQVWQTSERGLYDL
                     QERNGESMDMRGNFRTDTTGRYYFRTVRPKGYSIPMDGPVGDLVHAQGRHGMRPSHVH
                     MLIGADGHRELVTALYFGDDDYIDSDTVFGVSGSLVVAAKDDPDSPVKGLRAVRYDFR
                     LAKAEPGDSGRVGADPTTFMPKAAE"
     gene            complement(7595..7846)
                     /locus_tag="VHX39_23135"
     CDS             complement(7595..7846)
                     /locus_tag="VHX39_23135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994077.1"
                     /translation="MLRPAALAAHREIALAAKGLEIAHHQFAFGDLTLAVSSRVRKDG
                     LPEIEIGLGDPGLPKSTFTMSQLRQAEKKAWERGRVQRR"
BASE COUNT         1525 a         2495 c         2588 g         1591 t
ORIGIN      
        1 gttctggctt actccggcgg cctcgacacc agcgtgatcc tacgctggct acagaccacc
       61 tatcgctgtg aggtggtaac gttcaccgcc gatctcggcc agggcgagga actcggtccg
      121 gcactccaaa aggccgaact gttcggggtg aaagaaatct tcgtcgacga cctccgggaa
      181 acgtttgtca gtgacttcgt cttcccgatg ttccgcgcca acgccttgta tgagggacag
      241 tatctgctcg gcacctcgat tgcccgcccg ttgattgcgc aacggcaaat cgaaatcgcc
      301 gaactgaccg gcgccgacgc tgtggcgcac ggcgcgaccg gcaagggcaa cgaccaggtt
      361 cggttcgagc tgtcgtatta ttcgctgaag cccgacatca agatcattgc accgtggcgc
      421 gaatgggacc tgaccagccg cacgaaactg ttggaatttg ctgaggccaa ccagatcccg
      481 atcgccaaag acaaacgcgg cgaggcgccg ttcagtgtcg acgccaacct gttgcactcg
      541 tcgtcggaag ggaaaatcct cgaggacccg gcagtcgagg cggacgagct cgtctatcag
      601 cgcaccatcc ggccggagga cgcacccgat caggccaccg tcattgccgt cgatttcgag
      661 catggcgacc cgaccgccat cgacggcgtg cggctgtcgc ccgccgcttt gctgacgcga
      721 ttgaacgaac tcggccgcgc gaacggcata ggacggctcg acctggtgga gaaccgtttc
      781 gtcggcatga agtcacgcgg cgtctatgaa actcccggcg gcacgatcct tttggcagcg
      841 catcgttcaa tcgagagcat cacgctggat cgcgaggctg cgcacctcaa agacagcctg
      901 atgccgcgct atgccgagtt aatttacaac ggcttctggt tcagccccga gcggcggatg
      961 ttgcaggcgc tgattgacga aagccagcac agcgtcaccg gtcgggtgcg cctgaaatta
     1021 tataagggca acgtcacctg tatcggccgt gaatcgcccc acagcctgta tgacacgagt
     1081 gtcgtaacgt ttgaggacga ccaaggtgct tacgaccagt tcgacgccca gggattcatc
     1141 aaattgaatg ctttgcggtt gcggctgggg gcgacggtgg gaaggcgcgg cggcactctg
     1201 tgagatgtgt cggaatgggt cacttatgac caacgggcgc gtttggctcg cctgcttgct
     1261 gttgttgctg atcagcgcct gcgcacccaa cccgatcaac tgcgatctcg tggtggacgc
     1321 gcaagtgccg ctggaggtgc acaaccgtct cctggtcgtg ccgaccggca tcaacggcaa
     1381 atgggtgaag ctgctggtgg atactggcgc cgagcggacc gtgctgtctg ccgacgcggt
     1441 tgaacgtctc ggccttgaac gcgacgagaa gaccgtaacc cggtccaccg gcgttggcgg
     1501 agtgtacacc gcgcacgatg caatcattcc gggtttggtg ctcggcgggg ttcgctttcc
     1561 ggtcaggcat gtttcggtag ggcaattccg cttcggtccg ggtctcacgg cggacggact
     1621 tctgggctcg gatgtcttac tcgcgttcga cctcgacatt gacgtgccgg accgcaaatt
     1681 aaccctgtac cgcccacgcc tctgccctga cgtgcagccg ccatggaatg aaccgttcga
     1741 acgcgtgccg ggcgtcaaag cgctgcggga caggctgctt ataccgctcg aactggatgg
     1801 tgtgagcgga atggggatcc tcgataccgg cgcgcaggca acaacgatcg gggtaagcat
     1861 ggcgaaccgg ctcggcctga cacaggcggc gatgaccggc gatccggtcg tggaacatca
     1921 tggcgcgggt ccagggtcgc aggacgcgcg gttgcatcgg ttcgggttgc tacagatcgg
     1981 gccggcggtt gcccataatc cgatcctgtc ggtactcccg atcgatgccg gggttggtga
     2041 tgcacttgtg ggcgaagatt tcatcgatgg ccgccgcatt tggctgtcgt tctcgaatcg
     2101 agaagtcttc atcgccacgt cgaacgcagg ggattcgcag tagcacagtc ggggcgagag
     2161 ggtcggctcg agccatcact gcgccggttc agggactgcg cagcctgctt tcgaccccca
     2221 accaaaaggc gcttgacaaa cttatgctca ggcctagcat aagagggtaa atgctcgttc
     2281 ggagcataag ttggaggaac cagccatgtc catggccgcc gcactggaac gcaccgcacc
     2341 cctctatcag cgggtcaggt ccgtgatccc gcccatcgag tggccggtct tcgcggacga
     2401 catcgacgcc atccttacgc tgaagcagca gcggaatgcc gtgattttgg cccacaacta
     2461 tcagacgccg gagatctttc attgtgtcgc cgacatcgtg ggagacagcc tcgctctggc
     2521 gcgggaggcg atgaccgtcg atgccgacgt gatcgtgctc gccggggtgc acttcatggc
     2581 cgagaccgcg aaaatgctga acccgagcaa gaccgtgctg atcccggacc tggaggcggg
     2641 ttgctcgctc gccgcctcga tcaccgccgc cgatgtgcgg ttgatgcgcc agaagcatcc
     2701 gggcgtgccg gtggtcacct acgtgaattc gtccgccgcc gtgaaggccg agtcggacat
     2761 ctgctgcacc tcggccaacg cgaagaaggt cgtggaatcc ctcggtgtgc ccgaggtgat
     2821 catgctgccg gacgaatacc tggcccaaaa cgttgccgcc aaaacctacg tcaagatcat
     2881 cgcctgggct ggccactgcg aagtgcatga acggttcacg ccgaaggaag tccgcgcgct
     2941 gcgtgaagat tatcctggcg tcatcatcct tgcgcatccg gaatgccctc cggacgtggt
     3001 tgccgaggcg gacttcacgg gttcgacggc cgacatgtcg aactatgtgg ggcgcgagaa
     3061 gccggcgcgg gttgtgttgc tcacggaatg ttcgatggca gacaacgttt cgatcaatca
     3121 tccgtcggtc aacttcgtca agccgtgcaa cctctgcccg cacatgaagc ggatcacgct
     3181 ccctaagatc cgccgcgcgc tggaaacgat gacgcacgag gtgacgatcc cgtccgacct
     3241 cgctttcgct gcgcgccgtt cggtcgagcg gatgctcgcg gttgcctgag gaagcggatg
     3301 ctcgcagttg ccagaggaag tcgatgttcg cggttgcctg aggacgcgaa tgcttgcggc
     3361 agcttgagca gtgaaccctg caagccgcca ctgcggcagc gtcctttcgc gatgttgaag
     3421 agccgtccca gggacggcat cgcggtagct ccatgatgcc tccctcgccc gatcgtaagg
     3481 tcgcgctgcc gccaaccatg gctacctgag gagccgttac catgctcgtg ccaccccttc
     3541 cggaaatcat ggtcgaaccg gcggtccgtg ccgcgctgct ggaggatctc ggccgcgcgg
     3601 gtgatctgac caccgatgcc attgttccgg cggatgcccg gacgcactgc gcactggtgg
     3661 ctcggcagcc gggggtcgtg gcggggttgg atttcgcgct gctggcgttt cggctgatgg
     3721 atccacggat cgaggcaaag atcatgttgc cggatggtag ccggctcaaa cccggtgatc
     3781 tcatcgcaac agtgaccggc ccggcgcgcg gcattctaac cggtgagcgg gtggcgttga
     3841 attttctgtc gcacctgagc ggcgtggcct cggcaacgcg tggcatcgcg gacgccattg
     3901 ccggcacgaa ggcccaggtt tgttgcacac gcaagacgat gcccggcctg cgggcggcgc
     3961 agaaatatgc gatacgcgtc ggtggcggat cgaaccatcg ttttggcctc gatgacgctg
     4021 tgctgatcaa ggacaatcac gtcgccatcg ccggaggcgt taagccggcg gtcgagcgcg
     4081 cacgagccgg cgtcggccat ctggtgaaga tcgagctcga ggtcgatacg ctcgatcaat
     4141 tgcgcgaggc gatgcaactg cgggtcgacg ccgtgttgct ggacaacatg ggtcctgatt
     4201 tgctgcgtga agcggtgtcg atcgtttccg gccgagcaat taccgaggct tccggccgta
     4261 tccggccgga gacagcggcg gcaatcgcgg cctcgggggt cgatctactg tcggtaggat
     4321 ggctgacgca cagcgcgcag gtgctggata ttgggctgga tcatcgcgac gggtagcggc
     4381 tcggatcgtt caggtccagg cgccggatct gcgtccgtgc ggcgcaatga aaccgcccgg
     4441 accaccgagg aggtcgaaaa acgcttcgcg aagttgagca ggccgatcga tccgacggga
     4501 tgcatcaacc atttccagca ggccgaattc gcttcagcct gaagcaatcg cgttaatgtt
     4561 tcacatccgc gtacggatat tcgatattgc ccgtcttcaa agccggcggc cagaggatca
     4621 cctcggtatc cgggttgcgg aactgttcca tatcgttcgg cttcaggttc tggaactgta
     4681 cctccagcac gcggggttcg acccattcgc cgttggggcc gaatttcacg tcgccaacga
     4741 tggtatggaa cgtgccgtcg cgaagcgccg cggccagttt gtcgtcatcg atactttttg
     4801 ccgactccac tgcctgttgc agcacctgca tgtatccata agcaaatggc ggcaggtaat
     4861 agccaagcgc gtccacgccc tttgaggccg cttcggcctg gtattgcttc aggaactcga
     4921 gactggcggg cgaggcaagc ttcgaccagg gcagccagaa atcataatcg acgatgccgt
     4981 tcagcagcgg cccgagctgc accttgattg acgtgctctg cagtccgacc atgccgccac
     5041 caaacaattt cgtcttaagc cccacctcgt tggcggcccg tatcatcccg acgctgtccg
     5101 gcggatagga gtcgaccaaa acgatatcgg gattggtggc ctgaattgcc cgcacgatcg
     5161 gcgagtaatc actggtcgtc ggggggtagg tcttgtcgta gacgatcttc agcccgagtt
     5221 ccttggccac gacccgggcg ccgtccatcg cattacgcgg gaattccgcg tccgcgccga
     5281 cgatggcaag cgtcgttggt ttgggagttt gctgcatcgc cacggcaaag aagccgcggg
     5341 cctgttcttc cttgggatgc agcccgccga tcggcaggaa cgaaaagtat ttcggataat
     5401 tgaattccgt attgaccgcg agcccgaaca acgagaggaa cgtccgattg tgtcccatca
     5461 tgatcggcat cgccggtgca accatgttcg tagcatatcc gctgaccgcg atatcgactt
     5521 tgtcgacatc caacagcttg gtgtagatgc cgggaacggt cgccggattc gactggtcgt
     5581 cgtaataaat cagtttcacc ggacggccca gaaggccgcc tttggcgttg atttcctttt
     5641 cccagatctg catcgcgaac agcgccgctt tcccgttcgg ggccaggcct ccggtcaatg
     5701 ccatcccgaa cccgatcgtg atcgggtctt ccgcgcgcgc ggtcaatggg ccggccagca
     5761 gaagcatggc agcaaacaac gcaccgctca gccggctggt cggcaatcgc ctggatagca
     5821 tcgggtttcc tccattggat tcttttccgc cggcatctta cgggcgagag cgatggcaga
     5881 ccagcaccgg cgcgccgatt tattcacttg ccgatccacc gccagcaacg cgacaacagg
     5941 ccatgacgaa tgaacaaccg ttgttccgaa tcacgcggga aaccctgcgg gacggctcgc
     6001 tgatcgaggc tgcgcgacag cggatggcac ccggcatgcg gctccgcacc gatgccgaaa
     6061 tcgccgcctg tctcgacaca cttctggccg agcacccacc cgccgaggat gtctggctgt
     6121 tcggctatgg ttctttgatg tggaacccgg cgatgcattt ttccgaaatg cgcggcggtc
     6181 gcgtgcttgg ctggcaccgc aaatactgtc tctggctgga ggccggacgt ggcacccccg
     6241 aaaatcctgg gctgatgctc ggactcgacc gaggcggcca ggcggccggt gcactgtttc
     6301 gcgtccccgc cgatcaggcc cgcgccgagt tgttgttgcc gttccggcgc gagttgttta
     6361 ctcatagtta cgatccgcgg tgggtctcgg tggcgacgcc cgacggcatc atccgcgcga
     6421 tgacgttcgt tgtgagccgc gccggcatcg gctacgtgcg gcatctcgat ctggaccgga
     6481 tcgcgcacca tattgctacc gcatccggcg ccctgggctc ctgcatggag tacctgcaca
     6541 acacgctgga agcgctggaa gcacttggcc tggacgaccg catgttgcgt caggtctacc
     6601 gaatttgtgt cgcgcgtgcg acggcgaacc aatccagcca ggctggccgg agaacatagg
     6661 aggcaaccat ggtcgatctc gacgaattca ccaccactga cgccacgctg gagcagatgg
     6721 ccaacacggc gaaccctcgt ctgaagcaaa tcatggatgc ggcggtgcgg cacatgcacg
     6781 ccttcgttcg tgacgtcgaa ttgaccccgg cggagtggat ccagggcctg caattcctga
     6841 ccgcggtagg ccaggcctgc acgccgatcc ggcaggagtt catcctgctg tccgacgtgc
     6901 ttggcgtgag cgccgtggtc aacgccctgc atgaccgcaa ggccaaggaa ctggggtcgc
     6961 aaagcagcct gctcggcccg ttcttccgcg agggcgcccc ggaactgcct ctgggcgccc
     7021 agattgtcga gaagccgacg gctgaggaac tcgtcgtcta tggtcaggtc gctgatacgc
     7081 acggcacgcc ggtgccgggt gccttgatcc aggtctggca gaccagcgag cgcgggcttt
     7141 acgacctcca ggagcggaac ggcgagtcaa tggacatgcg cggcaatttc cgcaccgata
     7201 caacgggccg ctattacttc cggaccgttc gcccgaaagg atattccatt ccgatggatg
     7261 ggccggttgg cgatctggtg cacgcccagg gacggcatgg gatgcgaccg tcgcatgtac
     7321 atatgttgat cggggccgac gggcaccgcg aactggtcac ggcactctat ttcggcgacg
     7381 acgattacat cgattccgat accgtgtttg gcgtgtcggg ctcgttggtg gtcgctgcaa
     7441 aggacgaccc ggactcgccg gtgaagggtt tgcgcgccgt gcgctacgat ttccggctgg
     7501 ccaaggccga gccgggcgac agcgggcgcg ttggcgccga tccgacgacg ttcatgccga
     7561 aggcggcgga gtaggactgg ctctcgagcc cggtctacct cctttgaacc ctcccgcgct
     7621 cccaggcctt cttttcggcc tgccgcaact gcgacatggt gaatgtgctt tttggaaggc
     7681 ccgggtcgcc gagaccgatt tcgatctccg gtaagccgtc cttccgaacg cgggagctga
     7741 ccgcgagcgt caaatcgccg aatgcaaatt ggtgatgggc gatttcaagc cccttggctg
     7801 caagggcgat ctcgcgatgt gccgccagcg ccgccggacg cagcatgacc ccgagagcct
     7861 tcaaggcttc gggcgtcggg acaacaagga ttggggcctg aactcggaac atttgtcacc
     7921 tcttcaaaga gcaccgccgc ctgggcccgg acggattccg ggtgttgacg gttgcgacgg
     7981 ttcgaagagg cggaaaatca ggtgttcatg acgccaccct atatgggatg gacgtgagct
     8041 ttgtcacggt cgatgaacaa aaaatgctgg taggggcctg gcctcagtct ccacaagcgt
     8101 ctgttcggcg gcccgctctc acctttgcct cggacatccg ggctcgcata gctcgaacat
     8161 cagcaccctg gcgccgcagc ctattggtcc gcgccgtct
//
LOCUS       DATAVD010001211         2132 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2537507, whole genome shotgun sequence.
ACCESSION   DATAVD010001211 DATAVD010000000
VERSION     DATAVD010001211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2537507"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..265)
                     /locus_tag="VHX39_23140"
     CDS             complement(<1..265)
                     /locus_tag="VHX39_23140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994078.1"
                     /translation="MSASTSAVPRWAGPRRTAGSPRQRAANGLTVASWPVRALKGVLL
                     TICCLAVVGPFVAVIATSLADSKQVNSAGGLVLWPTHPSLNSYR"
     gene            complement(262..1212)
                     /locus_tag="VHX39_23145"
     CDS             complement(262..1212)
                     /locus_tag="VHX39_23145"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX3994079.1"
                     /translation="MTQSGDAPHAASRRPGWWSRAKRDRWLLLFGAPGILVILAFHYI
                     PLLGNIIAFKDYQPYLGIRDSAWNGVSNFSVIFNGDADFLNALKNTLIITTLQVIFVF
                     PVPICLALLLNSLLSERMKRVVQSILYLPHFMSWVIVVAIFQQMLGNAGLISNWLLRH
                     GHSGIHLIGNSSVFKELITAQVIWKDSGWGTILFLAALSQIDIQLYEASGVDGASRWR
                     QLWHVTLPGIRPVIILVLILRLGDILTVGFEQIVLQQPAVGTQASEVLDTYVYNNGIL
                     AGNWGTSAAVGLVKGVLGVVLVLGANKLAHIFGERGIYQS"
     gene            1811..>2132
                     /locus_tag="VHX39_23150"
     CDS             1811..>2132
                     /locus_tag="VHX39_23150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994080.1"
                     /translation="MSRPEYQGGVLVAASTPRPNADGIAPLPGLQALAERQRRHGRSR
                     PDRQSGGGVDPAALGCAAGCERAMGIRTAGPCWPEAEVAALCRANATALISSCSLARS
                     PIQRR"
BASE COUNT          393 a          661 c          725 g          353 t
ORIGIN      
        1 cccgatagga gttgaggctg ggatgcgtcg gccagagcac cagcccgccg gccgagttga
       61 cctgtttgct gtcggccagg ctggtggcga tgacagccac gaagggcccg acaacggcga
      121 ggcagcagat cgtcagcagc acgcctttca gtgcgcgaac cggccaactc gcgacggtga
      181 gcccgttggc ggctcgctgc cgcgggctgc cggccgttct gcgcggtccg gcccaccgcg
      241 gcaccgccga tgtcgaggcg ctcatgactg gtaaatccct ctctcgccga agatatgcgc
      301 gagcttgttg gccccgagga ccagaacgac gcccaacaca cccttcacca ggccgaccgc
      361 ggcagaggtt ccccaattgc ccgcgagaat gccgttgttg tagacgtatg tgtccaacac
      421 ctcgctggcc tgagtcccca ccgccggctg ttgcaacacg atctgctcga agccgacggt
      481 gagaatgtcg cccagccgca ggatcaacac caggatgatg accggccgga tgccgggcaa
      541 cgtgacatgc cagagctgcc gccaccggga ggcaccgtcc acgcccgagg cctcgtagag
      601 ctgtatgtca atctgcgaca gcgcggccag aaacaggatg gtgccccagc cggagtcctt
      661 ccagatcacc tgggcggtga tcaactcctt gaatacgctg gagttgccga tcaggtggat
      721 cccggagtgc ccgtgccgca gcagccagtt ggagatcagg ccggcattcc ccagcatctg
      781 ctggaagatc gccacgacga tcacccagga catgaagtgc ggaaggtaga gaatgctctg
      841 cacgacccgt ttcatccgct cggacagcag gctgttgagc aacaacgcca ggcagatcgg
      901 caccggaaac acgaagatca cctgcagggt ggtgatgatc agggtgttct tcagtgcgtt
      961 gagaaagtcg gcgtcgccgt tgaagatcac cgagaaattg ctgacgccgt tccaggccga
     1021 atctcggatg ccgaggtagg gctggtagtc cttgaacgcg atgatgttgc cgagcagcgg
     1081 gatgtagtgg aacgccagta tcaccaagat gccgggtgca ccgaagagca gcagccagcg
     1141 atctcgcttg gcccggctcc accagccggg ccggcgcgat gcggcgtgcg gagcgtcgcc
     1201 cgactgggtc acgtcggtgc gcgggttaac cgtgtgtatt gccacggcac acgcgatcgg
     1261 cagaggcacg ttgaggtcgg tgtaacggcg gcggggcagt cggttgccgc gactgtgtca
     1321 gcgcggtgtc atacacggca tccactcccg tccctggcca gatgatcggg ctgctcgcca
     1381 cggtttttcg gcacgactca ggctgtcgtg gctgatggcc atcggtgagg tggccgacga
     1441 cagcgcatac gtttgcatga aggcaagcac atgtcaaccc ttctggaccc gcgccggggg
     1501 cgggtgcgca taacgaatcg ctaaaccgat aacggcttcg catcggggat tctggggtct
     1561 cgaccggcga gcggtaggtg acgtggtcgg gcgcccggac catcaaggcg gcgacagggc
     1621 gtgcatacgt ttgcataaag tagacctaga atctacgtca tgacgaggtg gtgccgacgc
     1681 cggcgcccat cgcatgcgcc gagctgcgtc ccaaatgcag gcgcgatgcc gcggcgggtc
     1741 agggcccatc gctgtcccgg tcgccgttcg agtaattaac gtactggacg gacaagagcg
     1801 gggtgcggcc ttgagccggc cggaatacca aggcggcgtg ctggtcgcgg ccagcacgcc
     1861 gcgaccaaac gctgacggta ttgctcctct gcctggcctg caggcgctgg ccgagcggca
     1921 acgccgccac ggccggtctc gcccggatcg tcagtcggga ggcggagttg atccggcggc
     1981 gctcgggtgc gccgcgggct gcgagcgggc tatgggtatc cgtacggcag gaccgtgctg
     2041 gcccgaggcg gaggttgcgg cgctgtgccg ggcgaacgcc acggcattga tcagctcgtg
     2101 ctcgcttgca cgatctccca ttcaacgtcg ag
//
LOCUS       DATAVD010001212         2745 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2907650, whole genome shotgun sequence.
ACCESSION   DATAVD010001212 DATAVD010000000
VERSION     DATAVD010001212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2745
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2907650"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..579
                     /locus_tag="VHX39_23155"
     CDS             <1..579
                     /locus_tag="VHX39_23155"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX3994081.1"
                     /translation="ARHGYFCILPDMYYRLGTVLFDLPRRTDAMSAVIRASMNSLTNE
                     LVTDDTSAMLGWLDANDRVKPGPVGCVGYCMSGQYITTVSARFPHRMAAAASLYGVKI
                     VTDEPDSPHLLVDKIKGELYFAFAEHDASVPDHVIPDLRAALARTDVRNTIKIFPGTH
                     HGFAFPERAVYETIASEQTWTDMFAMWDRHLK"
     gene            complement(595..1071)
                     /locus_tag="VHX39_23160"
     CDS             complement(595..1071)
                     /locus_tag="VHX39_23160"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX3994082.1"
                     /translation="MDAAEIMTRFVVSVLPSATMTDIAKTLAQHAISGVPVCEADGRL
                     VGIITEGDLVRPLMHSRERRRDWWLRQLAEGTDLAPEFINYVKGGQASARELMRPNVI
                     TATETTSIGEIAELMMINDIKRVPIVRDGKLAGIVTRADLVKTLARNPDALLTPST"
     gene            complement(1680..2513)
                     /locus_tag="VHX39_23165"
     CDS             complement(1680..2513)
                     /locus_tag="VHX39_23165"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HEX3994083.1"
                     /translation="MMQSNLSDKLRGGHAWAGDLAEDEAPAGVLGTTDLSAGGIAAGN
                     LHVGIIMDGNGRWATRRGLSRLRGHEAGVKAIRRIVQAAPGLGVGTLTLYAFSSDNWR
                     RPPTEVSALMGLLQFYLANEVSILIRNGVRLSLIGRRDRLPDGIPAAMARAEAATAGG
                     TALHLRIAVDYSARVAILHAAAQAAGAGELTRESFSRLVTGEAGLRDVDLIIRTSGEQ
                     RLSDFLLWESAYAELHFTDRMWPDFDADDLAAALASFRSRERRFGGLQPTGPEVGLRQ
                     S"
     gene            complement(2537..>2745)
                     /locus_tag="VHX39_23170"
     CDS             complement(2537..>2745)
                     /locus_tag="VHX39_23170"
                     /inference="COORDINATES: protein motif:HMM:NF024988.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEX3994084.1"
                     /translation="LQVLQEAGLVEVTKGYEGNRPHTSCRMTKTGRQRFLDYLAVLEG
                     LVRDASKAADRPDTLSGHLGLIPA"
BASE COUNT          542 a          893 c          798 g          512 t
ORIGIN      
        1 gcccggcacg gctatttctg cattttgccg gacatgtact atcgtttggg caccgtgctg
       61 ttcgatttgc cgcggcgaac cgatgccatg tcggcggtga tccgggcctc gatgaacagt
      121 ttgacgaacg aactggtgac cgatgacacg tcagcgatgc tcggctggct cgacgccaac
      181 gaccgcgtca aaccgggccc ggtcggctgc gtcggttact gcatgagcgg gcaatacatc
      241 accaccgtat cggcccgttt cccgcatcgc atggcggccg ccgcatcttt gtacggcgtg
      301 aagatcgtca ccgacgagcc cgattcgccg catctgctgg tcgacaagat taagggtgag
      361 ttgtacttcg cattcgccga acatgacgct tccgtgccgg atcacgtgat cccggacctc
      421 cgcgccgcgc tggcgaggac cgacgtccgg aacaccatca agatcttccc tggcacacat
      481 cacggcttcg ccttccccga gcgcgcggtt tacgaaacca ttgcctcgga gcagacctgg
      541 accgacatgt tcgcgatgtg ggaccggcac ctgaagtagc cggccataac agaattacgt
      601 tgacggggtc agcaacgcgt ccgggtttcg tgccagcgtc ttcaccagat cggcccgcgt
      661 cacgatgccg gccagtttcc cgtcgcgcac gatcggcacg cgtttgatgt cgttgatcat
      721 catcagttcg gcgatctcgc cgatcgaggt cgtttcggtt gccgtgataa cgttgggccg
      781 catcagttcg cgcgcgctgg cctgtccgcc tttcacgtaa ttgatgaatt ccggtgccag
      841 atcggttccc tcggcgagct ggcgcagcca ccaatcacga cgccgctcgc ggctgtgcat
      901 cagcggcctc accagatcac cttcggtgat gatccccacc agccggccgt cggcctcgca
      961 gaccggcacg ccgctgatcg catgttgcgc cagggtcttg gcgatgtcgg tcatcgtggc
     1021 actcggcaac acggagacga cgaagcgggt catgatctcg gcggcgtcca ttgggtcact
     1081 cctccagcat ggcaataagc ggattgaacc accaggccgc tggagctgcg ttgaccagga
     1141 tcaacgccag atccctgtgc gatgtcggtg accggacaaa ctgtcgctct ctggccagtt
     1201 cggcgtctgt ccgtgcatta tccatcgccc gggtcgcaac aggtcgattc agagcaccga
     1261 tcgagcggca cttgtacaca ggttgcttta ccaggaccgg attgaaaaat cctctgtact
     1321 tctaaaattg agtcttactg agcaaatccg cggaattacc cacgcccatg tggcacgtct
     1381 ctgtgcggta cgatacgggg gcaacgaatg gcgccaaagc agctgccacc tcccactcga
     1441 ccgtgccgcg ccagccgccg gatttattca agagggacag aggtaccgag gccagagaag
     1501 gtcgcgtggt tctcggtcct acaccgatac aatccatcgg aatggatcgc gcatggtgcc
     1561 tgcccgcata ggtgacacaa taccgatgcg gagtctcgca gcggacccga tcgaacgaat
     1621 catcccgcaa ggcatctgac caaaattcaa tgcgatcgga ccgaagcgtc catccattct
     1681 caactttgcc gtagccccac ttcggggccg gtcggctgta acccgccaaa tcggcgctcc
     1741 cgactccgga acgacgccag cgccgctgcg agatcgtccg cgtcaaaatc cggccacatg
     1801 cggtcggtga aatgcaattc ggcgtaggcg ctctcccaaa gcaaaaagtc ggacaggcgc
     1861 tgctcgccac tggtccggat gatcaggtcg acgtcgcgca acccggcctc gccggtgacc
     1921 aaccgggaaa aactctcgcg ggtcagttcg cctgccccgg cggcctgcgc cgcggcatgc
     1981 aggatcgcga cacgggcgga ataatccacg gcaatccgca gatgcaaagc cgtgccgccc
     2041 gccgttgccg cctcggcgcg tgccatcgcg gccgggatac catccggcag gcgatcgcgc
     2101 cggccaatca aagacagccg aacgccgttg cggatcaaaa tcgacacctc attggccaaa
     2161 tagaactgca gcaaccccat cagagccgag acttctgtcg gcggcctgcg ccagttatcg
     2221 ctggaaaacg cgtaaagcgt cagcgttccg acacccagcc caggagcagc ctgaacgatg
     2281 cgccgaatgg ctttgacgcc ggcttcgtga ccacgcaggc gcgacagccc acgccgtgtc
     2341 gcccatctcc cgttgccgtc catgatgatg ccgacatgga ggttgccggc ggcaatgccg
     2401 ccggcggaaa gatccgtcgt gccgagtacc ccggcggggg cttcgtcttc ggcaagatcg
     2461 ccagcccagg catggccgcc gcgaagtttg tcagaaagat tactttgcat catagagttt
     2521 cccgataaat gaatgctcag gcaggaatca gacccagatg tcccgacagc gtgtcgggcc
     2581 ggtccgcagc ctttgacgcg tctcgcacca aaccctccag cacagcgagg taatccagaa
     2641 atcgttgccg gccggttttc gtcatacggc agctggtatg tggccggttg ccttcgtagc
     2701 ccttggtgac ctccacgagg ccagcctcct gcagcacctg aaggt
//
LOCUS       DATAVD010001213         6758 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_120131, whole genome shotgun sequence.
ACCESSION   DATAVD010001213 DATAVD010000000
VERSION     DATAVD010001213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6758
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120131"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..391
                     /locus_tag="VHX39_23175"
     CDS             <1..391
                     /locus_tag="VHX39_23175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994085.1"
                     /translation="VGGRRQFAVARGLVWRNASHLVWLDYERPLIMRRVIGRSLARVI
                     LRTELWTGTGNRERWHYLLQASHPIRWAWSTWETMRRETAELIGRSEYAHLNVVRLRH
                     PREAQEALETLVADARVGIRAPAKGVL"
     gene            480..629
                     /locus_tag="VHX39_23180"
     CDS             480..629
                     /locus_tag="VHX39_23180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994086.1"
                     /translation="MSGKDAGVKIMCVASCSNAREEHRSHVIVSGSYGGRYNAFNAAK
                     WASAA"
     gene            632..1306
                     /locus_tag="VHX39_23185"
     CDS             632..1306
                     /locus_tag="VHX39_23185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994087.1"
                     /translation="MNDAGVGKDDAGIVGLEYLDQIGLAAATADAQTCHIGDGDHMLA
                     NGVIGHVNRTAANVGCAVGQSVRDCAERMRSATVPTALPPPISDGARFVVRDVPGEPR
                     VICADSVGMLEPDDTGQIAITASHGALSGGRPDNAIPVGIYAVFFSDGGGGMDGAGIA
                     RLADLDGKGVVAGTTSADSAPIGDSRALYHDGILSHVNGPAEKLGGRVGMKLAAFVDL
                     LLAAAK"
     gene            1404..1982
                     /locus_tag="VHX39_23190"
     CDS             1404..1982
                     /locus_tag="VHX39_23190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994088.1"
                     /translation="MINGLDDEVFLQALRVLSWSNVATAILVHPKTGSVRLEEGPVPK
                     EAYGEALNATLIRVSKPLLGDPVRLAIVIVHELTHCLDFDFAGDALRSGGRGWASEIN
                     AHMNQGMIMRELNVCLPKSNGARANFDAMARSNTTFGNCMEWKTRSEVAKAIMPAYRD
                     LARRNDTTHTTDDSKWQKDGWLHYFPVKVDAY"
     gene            2124..2963
                     /locus_tag="VHX39_23195"
     CDS             2124..2963
                     /locus_tag="VHX39_23195"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HEX3994089.1"
                     /translation="MEFGASIFFTDYSITPAELGVALEERGFDSLWAAEHSHIPVPRR
                     TPPPGGGELAKRYYDVMDPFVTLTAAAAATKKLKVATGICLVIQRDTIQTAKSVASID
                     QVTGGRFLFGIGGGWNAEEVEAHGTVFATRMKKMREQMEAMKEIWTKSTAEYNGDIVK
                     VPSMMTWPKPTQKPWPPILLGGAFPWAARRAIRYGDGWFPNASSGNPEEYMPRFRQMC
                     SEAGREPLPVTMGGCPEDLGKLQRFRELGAVRANVSLPPEKADQILPILDRWAALIRQ
                     VNA"
     gene            complement(2995..3453)
                     /gene="queF"
                     /locus_tag="VHX39_23200"
     CDS             complement(2995..3453)
                     /gene="queF"
                     /locus_tag="VHX39_23200"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HEX3994090.1"
                     /translation="MTDVSGLTQLGQRVAIPSSPEQAVLERVAAPAQGKRYLVRFTCP
                     EFTTLCPLTGQPDFAHIVIDYVPRDWIVESKSLKLFLGSFRNQGTFHEGCTMQIAERL
                     TAALDPVWLRIGGYWFPRGGMPIDVFWQSSAPPDGVWIPAQDVPGYRGRG"
     gene            complement(3450..4577)
                     /gene="tgt"
                     /locus_tag="VHX39_23205"
     CDS             complement(3450..4577)
                     /gene="tgt"
                     /locus_tag="VHX39_23205"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018308056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEX3994091.1"
                     /translation="MTADFCFRLDATDGTARAGTIATAHGAVETPVFMPVGTAGTVKA
                     MTADAVRSTGARLVLGNTYHLMLRPGAERIARLGGLHRFMNWPGPILTDSGGFQVMSL
                     AKLRKIDADGVTFQSHIDGSSHRLTPARSVAIQHLLDATITMALDECTPFPATQGQAR
                     QSMELSMRWAGLSRNGFVARPGYALFGIVQGSVYPDLRAESAAALCDIGFDGYAIGGL
                     AVGEGQAEMFSVLEWTVPQLPADRPRYLMGVGTPDDIIGAVQRGIDMFDCVMPTRAGR
                     TARAFTSVGIFNLRNARFADDGGPLDPACACPCCINHSRAYLNHLFKAEEMLGPMLLT
                     WHNVQYYQDLTRGLRRAIQDGRFAAHAEQLRAGWTAREDIA"
     gene            complement(4567..5625)
                     /gene="queA"
                     /locus_tag="VHX39_23210"
     CDS             complement(4567..5625)
                     /gene="queA"
                     /locus_tag="VHX39_23210"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEX3994092.1"
                     /translation="MTVVSLSEFDFELPPDRIAQSPIRPRDAARLLCVRPGSASLDDR
                     HVADLPDLLQAGDVLVVNNTRVIPAQLTAWRGDARIGITLDQPQADGSWHALARNARR
                     LHQGDTLRFDAGGDLTAVVTGRDPDGGVTLQFNQRDEAFAAALQRAGALALPPYIHRP
                     HGPEPADAADYQTVFATRDGAVAAPTAGLHFTSGMLSSLAARGIRVITVTLHVGAGTF
                     LPVRSDDVAQHRMHAERGEISVAAAAAINDAKAAGGRIVAVGTTSLRLLESAATDSGT
                     VEPFDGETSLFILPGYQFRAVDLLMTNFHLPRSTLFMLVCAFAGAETMRRAYTHAIAS
                     GYRFYSYGDASLLWRHDR"
     gene            complement(5622..6170)
                     /locus_tag="VHX39_23215"
     CDS             complement(5622..6170)
                     /locus_tag="VHX39_23215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VUT family protein"
                     /protein_id="HEX3994093.1"
                     /translation="MDEAQRNVVGSAAFAVFLGCVPLANWLILHVGTVCVPSGPCLVP
                     VAPGIMAPSGVLTVGVALVLRDVVQRCLGLRFGLIAIAAGTALSALVAPAALVLASGT
                     AFALSELVDFAVYTPLQRRRLMLAVVASSLAGLVVDSIVFLSLAFGSLEFLPGQIIGK
                     VWAVLIAIPLVRLVRRVAPTPA"
     gene            complement(6170..6571)
                     /locus_tag="VHX39_23220"
     CDS             complement(6170..6571)
                     /locus_tag="VHX39_23220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3994094.1"
                     /translation="MRFTIDRIDHLVLNVTDVDIAAAWYQRVLGMEREDFGPHSRTAL
                     KFGGQKINLRPADQDVYTWPTGATRLAGAGDLCFITAAPPDEVVGHLHDLGIAIVQGP
                     VERAGALGPIQSVYCRDPDGNLVEISSYQSE"
BASE COUNT         1360 a         2033 c         2170 g         1195 t
ORIGIN      
        1 ggtgggtggc cgacggcaat tcgccgtggc gcgcggcctg gtgtggcgaa atgcgagtca
       61 tctggtgtgg cttgactacg aacgtccttt gatcatgagg cgggtgatcg gtcggtcatt
      121 ggcgcgggtt attctgcgca cggaattatg gacaggcacc ggtaatcgcg aacggtggca
      181 ttatttgctg caggccagtc atccgatccg gtgggcgtgg agcacgtggg agacgatgcg
      241 gcgggagacg gcagaactta ttgggcggag cgaatacgct catctcaatg tggtacggct
      301 gcggcaccct cgagaggcgc aggaagcgtt ggagactctg gttgccgatg cgcgcgtggg
      361 gattcgtgcg ccggcgaaag gcgtgctttg ataagccgag gctggcgagg tcacaggtcg
      421 taacgcgcgg taagcgagaa ttttatcgcg ggcgtgtcat atatggggag aagaaaccaa
      481 tgagtgggaa agacgccggc gtgaaaatca tgtgtgtcgc gagctgttcc aacgcgcgtg
      541 aggaacaccg ttcgcatgtc atcgtgtcgg ggtcttatgg cggccgctac aatgcgttta
      601 atgccgccaa atgggcgtcc gcggcgtgat catgaacgat gccggcgtcg gtaaggacga
      661 tgccggcatc gtcggacttg aatacctcga ccagattggt ctggcggcgg ctacggcgga
      721 tgcgcagacg tgccacatcg gcgacggcga tcatatgttg gcgaatggcg tcatcggtca
      781 tgtcaatcgc acagcggcga atgttggctg cgcggtcggc cagagtgttc gggactgtgc
      841 ggaacgcatg cgatcagcaa cggtgccgac cgccctgccg ccgccgatct ccgacggagc
      901 acgcttcgtg gtgcgtgacg tgcctggcga accgcgcgtg atttgtgctg attcggtggg
      961 catgctggag cccgacgaca ctgggcagat cgcaatcacc gcctcgcatg gcgcgttgtc
     1021 gggcgggcgg ccagacaacg ccataccggt tggcatctac gcggtattct tcagcgatgg
     1081 cgggggcggc atggatgggg ctggtattgc ccggctggcc gacctcgacg ggaaaggcgt
     1141 cgtcgccgga acgacatcgg cggacagtgc gccgattggt gattcgcgcg cgctgtatca
     1201 tgacgggata ttgtcgcatg tgaatggacc cgcggaaaaa cttggcggcc gggtcggtat
     1261 gaagttggcg gcattcgtcg atctgttact cgcggctgcg aaatgataac cagcataaac
     1321 cggttcggac cgctggcggg agacgaaaac ctcgcgacgg gtcacgctgc tgttcaactc
     1381 aatggctcgc aaggaacaaa gccatgataa acggcctgga tgacgaagta ttcttgcaag
     1441 ccctacgggt cctgtcgtgg tccaatgttg ccacggccat cctggtgcat ccaaaaacgg
     1501 gaagcgtccg gctggaggaa gggccagtac ccaaggaggc ttatggcgag gcactgaatg
     1561 cgacactcat acgtgtaagc aagcctttgt tgggcgatcc ggttcggctg gcaattgtta
     1621 tcgtgcacga actaacgcac tgtttggact tcgacttcgc tggggacgcg cttcggtcgg
     1681 ggggcagagg ttgggcttcg gagataaacg ctcatatgaa ccagggcatg attatgcgcg
     1741 agttgaacgt ctgtctccca aaatcgaatg gcgcacgtgc aaattttgac gcgatggcgc
     1801 ggtccaatac gactttcggg aactgtatgg aatggaaaac gaggtcggaa gttgccaagg
     1861 ccatcatgcc agcatatcgg gatctggcgc ggcgaaatga cacgacacac acaaccgacg
     1921 attcaaaatg gcagaaagac ggatggcttc actacttccc ggtgaaggtc gacgcatatt
     1981 gaattgatgc attcgggacg acggggccga acccgtccaa cggcgttatc ggatgtcccc
     2041 gcatgggcgg acagctcgtg gcgtgctacg ctcggtatgc agtcagcttc cgtaacccga
     2101 acccatcaga aaaggcacaa tccatggaat tcggcgcatc gatcttcttc accgactact
     2161 cgatcacccc ggccgagctt ggtgttgcgc tggaggaacg cggcttcgac tcgctgtggg
     2221 ccgccgagca ctcacacatt ccggtgccgc gacggacgcc cccgccgggc ggcggtgagc
     2281 tggcaaaacg ctactacgat gttatggatc ctttcgtgac cctgaccgcc gccgcggccg
     2341 cgaccaagaa actcaaggtc gccaccggga tttgcctcgt gatccagcgc gacacgattc
     2401 aaacggcgaa gtcggtcgct tcgatcgatc aggtcaccgg cggacgcttc ttgttcggca
     2461 tcggcggtgg ttggaacgcc gaggaagttg aagcgcatgg caccgtcttt gccacccgca
     2521 tgaagaagat gcgcgagcag atggaggcca tgaaagagat ctggaccaaa tcgaccgcgg
     2581 aatataacgg cgacatcgtc aaggtcccgt cgatgatgac ctggccgaag ccgacccaga
     2641 agccctggcc gcccatcctc ctcggcggcg cctttccctg ggctgcgcga cgggcaatcc
     2701 gttacggcga cggttggttc ccgaatgcca gcagcggcaa tccggaggaa tacatgccgc
     2761 ggttccgcca gatgtgctcg gaagcgggcc gtgagccgtt gccggtaaca atgggcggct
     2821 gtccggaaga tcttgggaag ctccagaggt tccgggaact tggcgcggtg cgggcgaatg
     2881 tgagtttgcc gccggagaag gcggatcaga tcctgcccat cctcgatcgt tgggcggcgt
     2941 tgatccggca ggtgaacgca tagaagcatc aggttggggg tggcgcgtcc gtagtcaccc
     3001 gcgcccgcga taccccggca cgtcctgcgc ggggatccat acgccgtcag gcggcgcact
     3061 gctttgccag aatacatcga tcggcattcc gccgcgcggg aaccagtagc cgccgatacg
     3121 caaccacacc gggtccagtg cagcggtcag ccgttcggcg atctgcatcg tgcagccctc
     3181 gtgaaacgtg ccctgattgc ggaacgaacc gaggaacagc ttcagcgact tgctttcgac
     3241 gatccagtcg cgtggtacat aatcgatgac gatatgtgca aagtcgggct gcccggtcaa
     3301 cggacacaat gtcgtgaatt ccggacaggt aaaccgcacc aaataccgct ttccctgggc
     3361 tggcgcggcg acccgctcca gcaccgcctg ttcgggcgac gatgggattg ccacacgttg
     3421 gcccaactga gtcagtcccg aaacgtcggt catgcgatgt cctcccgtgc cgtccatccg
     3481 gcgcgcaact gctcggcgtg tgcggcgaac ctgccgtcct ggatggcccg ccgcaggccg
     3541 cgcgtcagat cctgataata ctgcacgttg tgccaggtga gcagcatcgg tcccaacatt
     3601 tcctcggctt tgaacagatg gttcaggtac gctcgcgagt ggttgatgca gcacgggcaa
     3661 gcgcacgccg gatccagcgg cccgccgtcg tccgcgaacc gcgcattgcg cagattaaag
     3721 atccccactg aggtaaacgc tcgagccgtg cggccagccc ttgtcggcat tacgcaatcg
     3781 aacatatcga tgccgcgttg gactgcgccg atgatgtcgt cgggcgtgcc gacgcccatc
     3841 aaatagcggg gccgatctgc aggaagctgc ggcacagtcc attccagcac agaaaacatt
     3901 tctgcctgac cctcacccac cgcaagtccg ccgatcgcat agccgtcaaa accgatgtcg
     3961 cacaacgcgg cggccgactc cgcgcgtaaa tccggataaa cgctgccctg cacgataccg
     4021 aacaacgcat agcctggtcg tgccacaaaa ccattgcgcg acaagccggc ccatcgcatg
     4081 gacagttcca tcgattgccg agcctggccc tgggtcgccg ggaatggcgt gcattcatcc
     4141 agcgccatcg tgatagtggc atcgagcaag tgttgaattg caacggatcg cgcgggcgtc
     4201 agccggtggc tcgatccgtc gatatgcgat tggaacgtca ccccatcggc gtcgatcttg
     4261 cgcagtttcg ccagcgacat gacctggaag ccgccggagt cagtcaggat cgggcccggc
     4321 cagttcatga accggtgcag cccgccaagc cgcgcaatcc gttctgctcc gggccgcaac
     4381 atgaggtggt aggtattgcc tagtaccagc ctcgctccgg tggagcgaac cgcgtccgca
     4441 gtcatcgcct taacagtgcc agcggtgccg accggcatga ataccggcgt ttccaccgcc
     4501 ccatgcgcgg tcgcgatcgt tcctgcccgt gctgtgccgt cggtagcatc gagccggaag
     4561 caaaaatcag cggtcatgac gccacagcaa agatgcgtcg ccgtatgagt agaaccggta
     4621 gccggaggca atcgcgtgcg tgtaggcgcg ccgcattgtc tcggccccgg cgaatgcgca
     4681 gaccagcatg aataacgtcg accgcggcag gtgaaagttt gtcatcagca ggtctaccgc
     4741 acggaattgg taaccgggca gaatgaacaa tgaggtctcg ccgtcgaacg gctcgactgt
     4801 tccggagtca gtggccgcgc tctccagcag gcgcaagctt gtggttccaa cggcaacgat
     4861 tcgtccgccc gcggcttttg cgtcgttgat ggcagcggca gccgcaacgg atatttcgcc
     4921 gcgctcggca tgcatgcggt gttgcgccac gtcatcggat cgcaccggca agaatgtgcc
     4981 ggcgccgaca tgcagcgtca cggtaatcac gcggatcccg cgagccgcca gactggataa
     5041 cattccagac gtgaaatgta aacccgcggt cggcgcagcg accgccccgt cgcgcgtcgc
     5101 aaacaccgtc tggtaatccg cagcatccgc gggctccggt ccgtgcggcc gatggatgta
     5161 cggcggcaat gccaaagcac ccgcccgctg taaggccgct gcaaacgctt cgtcgcgctg
     5221 attgaactgc aacgtcacgc cgccgtccgg atcgcggccg gtcacgactg cggtcaggtc
     5281 tccgccggcg tcgaagcgca acgtgtcgcc ctggtgcagc ctcctggcat tccgtgccag
     5341 cgcgtgccaa ctcccgtccg cttgcggttg gtccagtgta atgccaatgc gcgcgtcacc
     5401 tcgccaggca gtgagttgcg ccgggatcac gcgggtgttg ttcaccacca ggacgtcgcc
     5461 ggcctgcagc aggtcgggca aatccgcgac gtggcggtcg tcaaggcttg ccgaacccgg
     5521 ccgcacgcac agcaaccgcg cagcatctcg cgggcggatc ggactttggg cgatacgatc
     5581 cggcggcagc tcgaaatcaa actccgagag actgaccacc gtcaggcggg cgtcggagcg
     5641 acccggcgca ccaaccgcac cagcggaatt gcgatcagca cagcccagac cttgccgatg
     5701 atctgaccgg ggaggaactc caggctgccg aatgccagcg acaggaacac gatcgagtca
     5761 actaccaggc cggccagcga cgatgcgaca actgccagca tcaggcgtct gcgttgcaac
     5821 ggcgtgtaaa cggcgaaatc gacgagttcg ctcagcgcga aggcagtgcc ggaggccagg
     5881 accagtgctg cgggggccac caaggccgac agcgccgtgc cggccgcgat cgcgatcagg
     5941 ccaaagcgca agcccagaca gcgctgcacc acatctcgga gcacgagagc gacgccgacg
     6001 gtcaatacgc cggatggcgc catgatcccc ggtgccacag gcacgaggca gggtccgctc
     6061 ggcacgcaga ccgtcccgac atgcaggatc agccagttcg ccaacggcac gcagcccaga
     6121 aacactgcaa acgcggccga tcctaccacg ttgcgctgcg cctcatccat cactcgctct
     6181 gataggagga gatttcgacc agattgccgt caggatcgcg gcaatacacg gactggatgg
     6241 ggcccagggc accggctcgt tcgacggggc cttgcacgat ggcgataccg aggtcgtgca
     6301 gatgaccaac cacctcatcc ggaggtgccg cggtgatgaa acacagatcg ccagcgccgg
     6361 ccaaacgggt cgccccggtg ggccacgtgt aaacatcctg gtcggccggc cgcagattga
     6421 ttttctggcc gccgaacttg agagcggtac gagaatgcgg gccgaaatcc tcccgttcca
     6481 tgccaagcac gcgctggtac caggcggcgg cgatgtccac gtcggtgacg ttgaggacga
     6541 ggtggtcgat gcggtctatg gtgaatcgca tcgggtcgag gctccttcgg ttgtgcctcg
     6601 gaggctctag cggatttccg caccggcggg aaccagtaac gcaaggtcag cccctctggg
     6661 cgccccaaaa cagtgggatt gccgccctca cgacgttctt aatgtcggac cggtatgccg
     6721 tcggttgaaa aatctggccc aaagggatgt atggcact
//
LOCUS       DATAVD010001214         1630 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1416613, whole genome shotgun sequence.
ACCESSION   DATAVD010001214 DATAVD010000000
VERSION     DATAVD010001214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1630
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1416613"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..447
                     /locus_tag="VHX39_23225"
     CDS             <1..447
                     /locus_tag="VHX39_23225"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HEX3994095.1"
                     /translation="ASAVVSEASAQNTAAASLPDQFAAALSSHDIKAFANLFAEDYVN
                     HQFSAAAPPPAAGKSQKQGTVDFFAGRLAGMPDLQVSVETSVISADRVAASFIYTGTH
                     EGTYFGIAPTHRKLRFTSCDIFSVKDGLVREHWGMGDIAGVLAQLR"
     gene            complement(455..>1630)
                     /locus_tag="VHX39_23230"
     CDS             complement(455..>1630)
                     /locus_tag="VHX39_23230"
                     /inference="COORDINATES: protein motif:HMM:NF013715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEX3994096.1"
                     /translation="YSQAGAQFGYGLLWTVFLTTPFMIAIQLVSARIGRVTGKGLAAN
                     VMELAPRWLVLAMIFLLVAANTFNIAADIAAMGESLSLVIGGLNHEHALIFAATSTLL
                     QVFVPYRRYAPVLKFLTLTLFAYVATALTVRIPWSDALWAAIWPKPVLNADYFMMVVA
                     VLGTTISPYLFFWQASQEVEEMHQGRLSRPLRDLRRGGDPELNRIRIDTIVGMIFSNV
                     IAFSIILTTAAVLNAHGVTNINSATEAAEALRPLAGNFTFFLFALGIIGTGMLAIPVL
                     AGSAAYGVSEAFGWPATLQAQAPDAVGFYSIIAAATVIGFGLGFTGIDAIHMLVWSAV
                     LNGIVAVPIMAMMMMIVANSNLMGRFKAKPRLIALGWIGTGLMALAVVALIGSSLIG"
BASE COUNT          341 a          490 c          510 g          289 t
ORIGIN      
        1 gcaagtgcgg tggtctcgga ggcgtcggcg cagaataccg cggctgcttc gttgccggat
       61 cagttcgcgg cggcgttgag ctcccatgac atcaaggcgt ttgccaattt gtttgccgaa
      121 gattacgtca accaccagtt cagtgcagcg gcgccgccgc cagccgcggg aaaatcccag
      181 aaacagggga ccgttgattt ctttgcgggc cggctcgccg gcatgcccga cctgcaggtt
      241 agcgtcgaga catcggtgat ttcagccgat cgggtcgcgg ccagctttat ctataccggc
      301 acccatgagg gcacttattt tggtatcgca ccgacccatc gcaagctgcg cttcacctca
      361 tgcgacatat tttcggtgaa agacggcctg gttcgcgagc attggggcat gggcgatatc
      421 gcgggtgttc tcgcgcagct gcggtgagcc atgactagcc gatcagcgac gacccgatca
      481 acgccacgac cgccaaggcc ataagtcccg tgccgatcca gcccagcgcg atcagccggg
      541 gtttggcctt gaaccggccc atcaggtttg agttggcgac gatcatcatc atcatggcca
      601 tgatcggcac cgcgacgatg ccgttgagca cggcactcca caccagcatg tgaatggcgt
      661 cgatgccggt aaaaccgagc ccgaacccga tcacggtcgc ggcggcaatg atggagtaga
      721 atccgaccgc gtccggcgcc tgggcttgca gcgtcgccgg ccacccgaaa gcctcggata
      781 cgccgtaggc ggcggagccc gccagcaccg gtatcgccag catgccggtg ccgatgatgc
      841 cgagggcgaa aagaaagaac gtgaaattgc cggccagtgg tcgcagggct tcggccgcct
      901 cggttgccga attgatgttg gttacgccat gggcattcaa cacggctgcg gtggtcagga
      961 tgatggagaa cgcaatcacg ttggagaaga tcatcccgac gatggtgtcg atccggatgc
     1021 ggttgagttc cgggtcaccg ccacgcctga ggtcgcgcag cgggcgcgac agcctgcctt
     1081 gatgcatttc ctcgacttcc tgcgaggctt gccagaaaaa cagatagggg ctgatggtgg
     1141 taccgagcac cgccaccacc atcatgaaat agtcggcatt gaggaccggc ttgggccaga
     1201 tcgcagccca cagcgcgtcg ctccatggaa tcctcacggt caacgcggtg gcgacatagg
     1261 cgaacagcgt cagcgtcagg aatttaagta ccggcgcgta gcggcgatag ggcacgaata
     1321 cctgaagcaa ggtcgatgtt gcggcaaaga tcagcgcgtg ctcgtgattc agcccgccga
     1381 tgaccagcga aagcgactcg cccatggcag cgatatcggc tgcgatgttg aaggtgttgg
     1441 ccgcgaccag cagaaatatc atcgccagca ccagccatcg cggcgccagc tccatcacat
     1501 tggcggcgag gcccttgccg gtgacccggc cgatccgcgc gctgacaagc tggatcgcga
     1561 tcatgaacgg agtggtgaga aataccgtcc agagcaaccc ataaccgaac tgcgctccag
     1621 cctgcgaata
//
LOCUS       DATAVD010001215         4451 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2907842, whole genome shotgun sequence.
ACCESSION   DATAVD010001215 DATAVD010000000
VERSION     DATAVD010001215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4451
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2907842"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..243)
                     /locus_tag="VHX39_23235"
     CDS             complement(106..243)
                     /locus_tag="VHX39_23235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994097.1"
                     /translation="MLDGRTQSVGTALAEERGHLLSRVTEGFDLADVVFPLVDKLERS
                     D"
     gene            complement(285..479)
                     /locus_tag="VHX39_23240"
     CDS             complement(285..479)
                     /locus_tag="VHX39_23240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994098.1"
                     /translation="MRKILRGYRREETVRFMAFHSDWRFAADFWTPGEGHERGGVEGE
                     GAYFRATIWFRYRASSTLMH"
     gene            complement(773..1849)
                     /locus_tag="VHX39_23245"
     CDS             complement(773..1849)
                     /locus_tag="VHX39_23245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994099.1"
                     /translation="MKAESKRIFAGAGAAPSMQGTAARGGLFRHSGRDGAWEALDNGL
                     PAGAEVHAILIRPDNPNVIFAGTQDGPYRSLDGGDRWHKLDFPEPGVMIWSLTIHPTR
                     PDVMYAGSAPIALYRSLDSGDTWHRLRNAVSPAHCERAGFDSRVLRITVDPNRPDDVY
                     AALEVSGVIRSTDGGETWADMSAPLIKFVEQPRYQSNVGGRHCGLCEGMLDSHATAVS
                     SAAVGTVFLGVRMGLFRSDDRGTTWHDTEIGRFSPLTYCHDVIVSAHDPHVLYTCLSP
                     AAFSTDGMLYRSDDLGQTWRRIDHGVKAGSTLMAVSEHPADPARLCCVTRGGQVFGTE
                     DGGESWREYRLPDGVEDVYAVACA"
     gene            complement(1893..2636)
                     /locus_tag="VHX39_23250"
     CDS             complement(1893..2636)
                     /locus_tag="VHX39_23250"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX3994100.1"
                     /translation="MWRDGKCATMGWLSVSHGFTAEVMARQGFDSLCVDLQHGTAEMT
                     DVLPMLQAISQTDTVPVVRVAWNEPATIMKALDLGAMCIIVPLVNTAEEAAKAVAACR
                     YPPLGMRSSGPVRAMHYGGADYQAQANDEIVIMAMIETKEGIANLDAICATPGLDAVY
                     IGPADLSFALGLAPRGDNPDPLHLATCDKIRETAHKHGIKCVMHCAGAAFAAGAVKRG
                     FDMVMLTSDLSCMIAGARAQLDELKSKTA"
     gene            complement(2771..3706)
                     /locus_tag="VHX39_23255"
     CDS             complement(2771..3706)
                     /locus_tag="VHX39_23255"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase A"
                     /protein_id="HEX3994101.1"
                     /translation="MALLIVDLDKHIGSAKAWRDTFGEKLPDLEIRTWPDAGNLEDIE
                     YLAFMHPDFDSLPVFPNLKAMFSRAAGVESFVQHPKLPKAPLCKVEPPDGDPMMTEYV
                     VMHVLRFHRDMPGYQAAQANREWRRTTIVRPEQRRVGFLGFGMMAKAPALVLKSLGFN
                     VSAWVRNPRHESDVPIYHGPDQLEPFLHQTDIAVCLLPLTRETEGIFCTRTFAMMPRG
                     AMLVNVGRGKHVVDEDLIKALDSGQLSYAALDALWPEPLPPTSPLWLHPKVTVMPHVA
                     RRPTVAQLVTEIAANIRSVEAGGRLLQEVDITEGY"
     gene            complement(3756..>4451)
                     /locus_tag="VHX39_23260"
     CDS             complement(3756..>4451)
                     /locus_tag="VHX39_23260"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3994102.1"
                     /translation="DGAIMVSSFSAYEYDPSYALQVYNTYPDKFRVVTPVDATDPAID
                     DVVAKWAATQGARGIRIRMRDGLPMDAGHPGLNRAFAAAAKHGLPVNLLCWGILDKGL
                     PHIQRHPDTVIVIDHLGLLQPARPPVPADVWADLPKLLALAQYGNVRVKISGACTMSH
                     IRFPYDDIWDPVLRVIDAFGLDRCMWGTDWTRTIGMLTYEQGVAPFRDTKRLSESDKV
                     ALMGGTLQKVYKW"
BASE COUNT          864 a         1424 c         1343 g          820 t
ORIGIN      
        1 agaaacatta tgcagaagat gggtgccacg aaccgaactc aggcagcata caaggggcag
       61 aggttttcga gcgatttcga gggtgcaaga tcgattgggg cgtagtcaat cgctccgttc
      121 gagtttgtcc acgagcggga acacaacatc ggccaggtcg aagccttccg tcacgcgcga
      181 cagcagatgc ccacgctcct cggccagcgc ggtgccgacg gactgcgtgc ggccatccag
      241 cacccgcgct tcgtctgcgc ggcaaccgct cagctacagc tcgttcagtg catcaaggtc
      301 gacgacgctc ggtaccggaa ccagatggtt gcgcggaagt aggcgccttc gccttcaacg
      361 ccgcccctct catgcccctc accgggcgtc cagaagtcag cggcaaaccg ccaatctgag
      421 tggaacgcca tgaaccgaac cgtctcctcc cgcctatagc cacgcagaat cttgcgcacc
      481 acactcacca ggttgtctta gcgcagcagg tggaagacgg cgccgaagta agcgaaggca
      541 tgctcgtgcg cttccatgtg ctccacccga tcggaccact cagactaatg gccgatagac
      601 cccccacatt ctggacggtc tcttaaccga aaacgcgaca aaaacccgtt tgagcgccgt
      661 ctgcgcgaca tccacacggt cgcgcagcag ggacaggggc gaattctgca ctacgacggt
      721 gggtcaggtc atgcttggtc agtcgccgga gaacatctgc tgacgggacg tctcaggcac
      781 aggcgaccgc atagacgtcc tcgaccccgt ccggcagccg atattcccgc caggattcgc
      841 ccccgtcctc cgtcccgaac acctggccac cccgcgtaac gcagcacagt cgcgccggat
      901 cggcgggatg ctcactgacc gccatcagcg ttgagccggc cttgacccca tgatcgatgc
      961 gccgccacgt ctggccgagg tcatcgctgc ggtacagcat cccgtcggtg ctgaacgcgg
     1021 ccggcgacag gcaggtatac agcacgtggg ggtcgtgcgc cgaaacgatc acgtcgtggc
     1081 agtaggtcag cggcgagaaa cggccgatct cggtatcgtg ccaggtcgtt ccacggtcgt
     1141 cgctgcggaa cagacccatc cgcacgccca gaaagaccgt tcccacggca gccgaggata
     1201 cagcggtagc atgcgaatca agcatgccct cgcacaaccc gcagtggcgg ccgccgacat
     1261 tgctttgata acgcggctgc tcgacgaatt tgatcagcgg ggcggacatg tccgcccagg
     1321 tttcaccgcc gtcggtactg cggatgacac cgctgacttc cagcgccgcg tagacatcat
     1381 ccggccggtt cggatcgacg gtgatgcgca ggacgcggct atcgaatccc gcgcgctcgc
     1441 aatgggcggg tgagacggcg ttgcgcagcc gatgccaggt gtcgccgctg tccaggctgc
     1501 gatacagcgc gatcggcgcc gaccccgcat acatcacgtc cggtcgcgtc ggatggattg
     1561 tcagcgacca gatcatcacg cccggttccg ggaaatccag cttgtgccac cgatcgccgc
     1621 catccaaact gcgatacggc ccgtcctgtg tgcccgcgaa gatcacattc ggattgtcgg
     1681 gccggatcag gatggcatgc acctccgcgc ccgccggcag gccgttgtcc agcgcctccc
     1741 acgcaccatc gcgacccgag tgccgaaaca gcccgccacg cgcggcagtg ccttgcatgg
     1801 aaggggcggc gcccgcaccg gcgaaaatgc gtttggattc ggctttcatg gcatcgtccc
     1861 cttgacggtc accggtcgcg atgacgctat cctcaggcgg tctttgactt aagttcgtcg
     1921 agctgcgccc gtgcgccggc gatcatgcac gacagatcgg acgtcagcat caccatgtcg
     1981 aagccgcgtt tcaccgcacc cgccgcgaat gccgcaccgg cacagtgcat gacgcacttg
     2041 atgccgtgct tgtgcgctgt ttcccggatc ttgtcgcagg tggcgagatg cagcggatca
     2101 gggttatcgc cgcgcggggc caagcccaat gcgaacgaca aatcggctgg cccgatatag
     2161 acggcgtcta ggccgggcgt ggcgcagatg gcatcgaggt tggcgatgcc ctccttcgtc
     2221 tcgatcatgg ccatgatgac gatctcgtcg ttggcctggg cctggtagtc ggcgccgccg
     2281 tagtgcatgg cgcgcacggg cccagacgag cgcatgccta ggggcggata gcggcacgcg
     2341 gccaccgcct tcgcggcttc ctcggcggta ttgaccagcg gcacgatgat gcacatcgcg
     2401 ccaaggtcca gggctttcat gatggttgcc ggctcgttcc atgctacccg cacgaccggg
     2461 accgtgtcgg tctgcgagat cgcctgcagc atcggcagga cgtctgtcat ttcagcggtg
     2521 ccgtgttgca ggtcgacgca cagggaatcg aagccctgac gcgccatcac ctcggccgtg
     2581 aacccatggg acacggagag ccagcccatg gtcgcgcact tgccgtcacg ccacatctgc
     2641 ttgattttgt tcggtcgcat ggtcattccc ctggtcttgt tcattgatcc cacaatcgga
     2701 ttagtctctt tcaaaccgaa accaccgcct gaagcaaggg ccaccccgat ccggatataa
     2761 gcaagtgggg ttagtatcct tccgtgatgt cgacttcctg caaaagccgg ccacccgcct
     2821 cgacgcttcg gatatttgcc gcgatctcgg tcacgagctg agcaacggtc ggccgccgtg
     2881 ccacgtgcgg catcacagta accttggggt gcagccaaag cgggcttgtt ggcggcaagg
     2941 gctcaggcca cagcgcgtcc aacgcggcgt atgacaactg tcccgaatcg agcgctttga
     3001 tcagatcctc atcaaccaca tgcttgcccc gcccgacatt caccagcatt gccccgcgtg
     3061 gcatcatggc aaaagtgcgt gtgcagaata tgccctcggt ttcccgcgta agcggtaaca
     3121 ggcagaccgc gatgtcggtc tgatgaagaa atggctctag ttggtctggg ccatgataga
     3181 tcggaacgtc actctcgtgc ctcgggttgc gaacccaggc ggagacgttg aaaccgagcg
     3241 acttcaacac gagcgccggc gccttcgcca tcatgccgaa gccgaggaat ccaacacgcc
     3301 tttgttcggg tcgaacaatc gttgtgcggc gccattcccg attggcctga gccgcctgat
     3361 accccggcat gtctcgatga aaacgaagaa catgcatgac gacgtattcg gtcatcatcg
     3421 gatcgccatc tggcggctcg accttgcata gcggggcctt cggcagcttt ggatgttgaa
     3481 cgaaggactc gacaccggcg gcgcggctga acatggcttt caaattgggg aaaaccggaa
     3541 gggaatcaaa atcaggatgc atgaaggcga gatattcgat atcctccagg tttccggcat
     3601 ccggccaggt gcggatttcc agatcgggaa gcttctcccc gaaggtgtcg cgccatgcct
     3661 tggcgctgcc gatatgtttg tcgagatcaa cgatgagcag cgccataacc gcctcctgag
     3721 ttattcgatc actgttgtag ccggtcgcga tcgaatcacc acttgtatac tttctgtaac
     3781 gttccgccca tgagcgccac cttgtcgctc tcggacaggc gtttggtgtc gcggaacggc
     3841 gccacaccct gctcataggt cagcatgccg atcgtccgcg tccagtcggt gccccacatg
     3901 caacgatcca gcccgaacgc atcgatgacc cggagcaccg ggtcccagat gtcgtcgtac
     3961 gggaaccgaa tgtgcgacat cgtgcaggcg ccgctgatct tcacccttac gttcccgtat
     4021 tgggccaaag cgagcagctt cggcagatca gcccagacgt cggccggaac cggtgggcga
     4081 gcgggttgca gcaggccgag atggtcgatc acgatgaccg tatcggggtg tcgctggatg
     4141 tgcggcaggc ctttgtccag gatgccccag caaagcaggt tgaccggcaa accatgtttg
     4201 gcagcggcgg cgaaagcgcg gttcaggccg ggatggccag cgtccatcgg caggccgtcg
     4261 cgcatgcgga tgcgaatgcc gcgtgcgcct tgcgtcgccg cccatttcgc gaccacatcg
     4321 tcaatcgctg gatcggtcgc gtcgaccggc gtcacgaccc ggaatttgtc cggataggtg
     4381 ttgtaaacct gcagcgcgta gcttggatcg tattcatagg cgctgaacga cgacaccatg
     4441 atcgcgccgt c
//
LOCUS       DATAVD010001216         4011 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_488055, whole genome shotgun sequence.
ACCESSION   DATAVD010001216 DATAVD010000000
VERSION     DATAVD010001216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4011
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_488055"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..378)
                     /locus_tag="VHX39_23265"
     CDS             complement(<1..378)
                     /locus_tag="VHX39_23265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEX3994103.1"
                     /translation="MPLSVLFKPRWKRSAQTVAKASDRRGDKRYPAYQPVTIRLQGMP
                     PVAGTLVSISLGGAAIRFHGWVADVPEPWLTRLKRGDELRVDGLNGGPMCCRAVTAAD
                     GVLRVQFSRDDALRHKLRSVVDDA"
     gene            964..1929
                     /locus_tag="VHX39_23270"
     CDS             964..1929
                     /locus_tag="VHX39_23270"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX3994104.1"
                     /translation="MLALVGEAKSYSGEPNPQVIHRERKWFEGVSGVADTAEQPRISA
                     SRWVGHAAEWCEQESEIEAGCHVVGITLQPMSDITLFAAGKLISTGHLPRGSMRVNEP
                     GLPRRGIFRGAYDVLHLHVPNGIIAEFADPERGYAWSAPRLAESPTIDPVIEGLARSL
                     IHAEELGGAFGQSYAEGIGLAITAQLFGARSGTASSGRPRVSGLSKWRLKRATEYMDA
                     NLAEPINLADIAAAAGLSRMHFAAQFRAATGVRPHEFLLQRRIERAKDLLLHSRLALV
                     EIALDVGFKTQAHFTTVFARFVNETPNVWRQRNRGISEEPALKAA"
     gene            2088..3149
                     /locus_tag="VHX39_23275"
     CDS             2088..3149
                     /locus_tag="VHX39_23275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3994105.1"
                     /translation="MPEKITVNRRRLLGAAVLAIAGTRLISIDPAAAQSGKAKPVTLP
                     AIKPGTNTSFAALKQIDAGVLNVGYAESGPDNGPAVILLHGWPYDIHSYTDVAPLLAA
                     AGYRVIVPYLRGYGTTRFLSDRTVRNGQQAVVAADIIGLMDALKIQKAVLAGYDWGAR
                     TADIIAALWPERCKALVSVSGYLIGSQQANAKPLPPKNELEWWYQFYFATERGAAGYA
                     QYRREFAKLIWQTASPRWKFDDATFDRSAAAFDNPDHVAVVIHNYRWRLGLAEGETKY
                     DALERQLVASPVITVPTITLEGDANGAPHPEPGFYRKRFSGRYEHRNILGGIGHNLPQ
                     EAPREFAQAVVDVDGFGGS"
     gene            3238..>4011
                     /locus_tag="VHX39_23280"
     CDS             3238..>4011
                     /locus_tag="VHX39_23280"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HEX3994106.1"
                     /translation="MTRRGLLNSGLLLTGAATVGTLAAATGFSQAGSAKPAFTNPGGW
                     INSAAPITLAALRGKVVLVNFWTYSCINSRRPMVYLKRWHTEYGPLGLQVIGIHTPEF
                     RFEHTRANVETYVRAEGIAFPVCQDNDYRIWESFDNNAWPAFYLMDREGRIVLTRLGE
                     DHAGEIERAIRNLLSLPVTGSVGRSGDDPDLSAIRSPELYFGSGHPTPQDATQSPGPG
                     EARYSFDETAKPSFNRYLLDGVWSREEQPLVQRSAQGRLV"
BASE COUNT          759 a         1176 c         1262 g          814 t
ORIGIN      
        1 cgcatcgtcc accacgctgc gcagtttatg ccgcaacgcg tcgtcgcgac tgaattgtac
       61 ccggagcacg ccgtcggcag cggtcaccgc ccggcagcac attgggccgc cgttcagtcc
      121 gtccacccgt aattcatcgc cgcgtttcag tcgtgtaagc cacggttcgg gcacatctgc
      181 gacccatcca tgaaatcgga tcgccgcgcc gccaagcgag atgctgacca gtgttccggc
      241 caccggtggc atgccttgca gccggatcgt gaccggttgg taggccggat aacgcttgtc
      301 cccgcggcgg tccgatgctt tcgcgacggt ctgggccgac cgtttccatc gaggtttgaa
      361 caggaccgag agcggcatcg cagtgacctc acgctcaaaa agagggcatt tgtccgcttt
      421 cgcggctttc atcgtggctt cattcggtgg ctgtggagcg ccgttgcctt tgcaaccaga
      481 tccaccagat gaccagcgtg cgccaaacgg gcaggtgacc cgtcacggtc tttctacggc
      541 gcaaccgccc tgggcgtggt tcttaaaaag tgtgaatcgc cgttaatatc attcagcaag
      601 tgttagcagc ggttggataa tcgagcgttg cgatgcggtg acgccgacct ctggagctgg
      661 ccgttcttgc cagaaccgac cgctcatcca accacccact cggcaaaaat cccccgaaaa
      721 gcacgttcgt ctcgcgattt cggcgacgcc tggttccgac aatccggcct tgttatccgg
      781 gcaacagaac gagtgggacc ggatcacggc ggcaccggtc ggctgcaggc gttaaggatc
      841 gttgttagat gcaggattta cgcgatttca cgagacttaa gtaacgcccc aaggatttca
      901 gcttagcctc ggcctacttg gatgctgcgg acagatcgaa gccgcccaat acggaggact
      961 aaaatgttgg cactggtggg agaagccaaa tcgtattccg gggaacccaa tcctcaggtc
     1021 attcatcgcg agcggaaatg gtttgaaggc gtgagcggcg tcgccgacac ggccgagcag
     1081 ccgcggattt ccgcatcacg ctgggtcggt cacgcggccg aatggtgcga gcaggagtcg
     1141 gaaatcgagg caggctgtca tgttgtcggc atcaccctgc agccgatgtc ggacattacc
     1201 ctgttcgccg caggcaagct gatcagcacc ggccatctgc cgcgtggcag catgcgtgtg
     1261 aacgagcctg gcctgccccg gcgcgggatc ttccgtgggg cttacgatgt gctgcatctg
     1321 catgtcccga acgggatcat cgcggagttc gccgacccgg aacgaggcta tgcgtggtcg
     1381 gctccgcggc ttgcggaaag cccgaccatc gatccggtga ttgaagggct ggcgcgctcc
     1441 ttgatccacg ccgaggaatt gggtggcgcg ttcggccaga gttatgccga gggtatcggt
     1501 ctcgcgatca ccgcccaatt gtttggcgca cggtctggca ccgcgtcgag cggccgccct
     1561 cgggtttccg gcttgtcgaa atggcggttg aagcgggcaa ccgagtatat ggatgcgaac
     1621 ctcgccgaac cgatcaacct cgccgacatc gcggcggcgg ccggtttgtc gcgcatgcat
     1681 ttcgcggcgc agttccgcgc ggcaaccggt gtccggccgc acgaatttct gttgcagcgt
     1741 cggatcgagc gcgccaagga tctgttgctt cactcgcgcc tggcgttggt cgagatcgct
     1801 ctcgacgttg gcttcaagac gcaggcgcat ttcaccaccg tgttcgcacg gtttgtgaac
     1861 gagacgccca acgtctggcg gcaacgcaat cgtgggattt cggaagagcc ggcgttgaaa
     1921 gcggcgtaaa ctccatcacc tcagtcggta agccacgtgc gcggtgccga ataagttggc
     1981 gtcggttcaa tcttgaatgt cagcgcggga gcaatattcc cgcggcgttt ggaaacgttg
     2041 tggtctgcgg tgcgacgttg cggttgctcc tgaccggagg atggaacatg cctgaaaaaa
     2101 tcaccgtcaa tcgtcgtcgg ttgctcggcg cagcggtatt ggcgatcgcg ggcaccaggc
     2161 tgatatcgat cgacccggcg gccgcacagt cgggcaaagc gaagccggtc actctgccgg
     2221 cgatcaagcc gggcaccaac acgtccttcg ctgccctgaa acaaatcgat gccggagtgc
     2281 tgaatgtcgg ctacgccgaa tccgggccgg acaacggtcc cgctgtcatt ctgctgcatg
     2341 gctggcctta tgatattcac agctataccg atgtcgcgcc attgctggcg gcggcgggat
     2401 atcgtgtgat cgtcccgtat ttgcgtggtt acggcacaac gcgcttttta tcagatcgca
     2461 cggtccgaaa cgggcagcag gcggtggtcg ccgccgacat cataggtttg atggatgctc
     2521 tgaagatcca aaaagcggtt ctcgccggct acgattgggg tgcgcgcacg gcggatatca
     2581 tcgcggcgct atggccggaa cggtgcaagg ccctggtttc cgtgagcggt tacctgatcg
     2641 gaagccagca agccaatgcg aagccgttgc cgccgaagaa cgagctggaa tggtggtacc
     2701 agttttattt cgccaccgaa cgcggtgcgg caggttacgc ccaataccgg cgcgagttcg
     2761 cgaagctgat ttggcagacc gcttcgccca ggtggaaatt cgatgacgcg acgttcgatc
     2821 gcagcgcagc ggcattcgac aatccggacc atgtcgccgt cgtcatccat aattaccgct
     2881 ggcggcttgg tctggctgag ggcgagacaa aatatgacgc gctggaaagg cagcttgttg
     2941 cgtctccggt cataacggtg ccgacgatca cgcttgaagg tgatgccaat ggtgcgcctc
     3001 atccggagcc gggcttctac cgcaagcggt tttccggtcg gtatgaacac agaaacatcc
     3061 ttggcggcat cggtcacaac ctgccgcaag aggcgcctcg ggaattcgcc caggccgtgg
     3121 tggatgtcga cggttttggc ggaagttaaa tgcgtttgtc gtgtcggacc gcgatccatc
     3181 gtccgacccc gcacaatgtg atcctggcag tccagcggct tcggtaagga gaatgtgatg
     3241 acgcgccgag gcttgttgaa ttcgggactg ctactgaccg gtgccgcaac cgtcggcaca
     3301 cttgccgcag caaccggttt ctcgcaagcc gggagcgcga aacctgcgtt cacgaacccc
     3361 ggaggctgga tcaacagcgc cgcgccgatc acgctggccg cactgcgcgg caaggtcgtg
     3421 ctggtcaatt tctggaccta ctcgtgcatc aacagccgcc ggccgatggt ctatttgaaa
     3481 cgctggcaca ccgaatacgg gccacttggg ttgcaggtta ttggcatcca tacgccagag
     3541 tttcgtttcg agcacactcg cgccaatgtg gagacctatg ttcgtgccga gggcattgcg
     3601 tttccggtct gtcaggacaa cgattatcgg atctgggaat cgttcgataa taacgcgtgg
     3661 cctgccttct atctgatgga ccgcgagggg cgcatcgtgt tgacgcgtct gggcgaggat
     3721 catgcgggcg aaatcgagcg ggcgattcgc aatctgctgt ctctcccggt gaccggatct
     3781 gtgggccggt ccggcgacga tcccgacctg tccgctatac gctcgccgga actgtatttc
     3841 ggcagcggtc acccgacgcc tcaggacgca acgcagtctc cgggaccggg ggaggcgcgt
     3901 tattccttcg atgagacagc aaaaccgagt ttcaatcgat atctgctgga cggtgtatgg
     3961 tcgcgcgagg agcagccact ggtgcagcgg tctgcgcaag gccggctggt t
//
LOCUS       DATAVD010001217         1529 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1977380, whole genome shotgun sequence.
ACCESSION   DATAVD010001217 DATAVD010000000
VERSION     DATAVD010001217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1977380"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(163..771)
                     /locus_tag="VHX39_23285"
     CDS             complement(163..771)
                     /locus_tag="VHX39_23285"
                     /inference="COORDINATES: protein motif:HMM:NF012273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX3994107.1"
                     /translation="MLVIHGSARSRAQRTLWMAFELGIPYEHDDILPRSPATKTPEFM
                     ALNPNSRLPVIEDDGFVLCESMAINFYLAKKHNSPLYPSNQSNEALALQWSFWEVDRL
                     DRTLANYLAHTSILPEAERDKSIADAAWAEVEPAMNVLNGALSKSQWLAGPAFSIADL
                     NVACALWRCLGMDLSRWPAMRDWFTRCWDRPAGKKARAAREG"
     gene            complement(981..1370)
                     /locus_tag="VHX39_23290"
     CDS             complement(981..1370)
                     /locus_tag="VHX39_23290"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003619330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEX3994108.1"
                     /translation="MQMDPSQPIGELSLRTVAMPADTNPAGDIFGGWIMSLMDLAAGV
                     AASTQAKGRVVTAAVSNLSFLRPVHVGDVVCVYTDVKRTGRTSITLGVETWVLRRGQG
                     ERVRVTAAEFVLVAVDEHGRPRNLSDS"
BASE COUNT          305 a          442 c          463 g          319 t
ORIGIN      
        1 ttgctcccag tacatcacat gggcggacga gatcggcagg taaccggtct cgtagggtcc
       61 gatctcgggg aacaggtcgc ctctgggcat tgcggaggat cgtataggtg acgacgggcg
      121 ggtggaacag tttttctccg ctcgccttgg ttgttgttga cgtcagcctt cccgcgccgc
      181 acgggccttt ttgccggcgg gccgatccca gcaacgcgtg aaccagtctc gcatcgccgg
      241 ccagcgactg aggtccatgc cgaggcagcg ccacagtgca cacgcgacgt tgagatcagc
      301 aatcgagaat gccggcccgg ccagccattg cgatttgctg agcgcgccat tgagcacgtt
      361 catcgccggc tcgacttcgg cccaggcggc gtcggcgatc gatttgtcgc gttcggcttc
      421 gggaaggatg ctggtgtggg ccaggtagtt cgccagcgtg cggtccagcc ggtcgacctc
      481 ccaaaaactc cattgcagag cgagcgcttc attggactga ttggacggat acagtggact
      541 gttatgcttt ttggcgagat aaaagttgat cgccatcgac tcgcacagca caaagccgtc
      601 atcctcgatc accggaaggc ggctgttcgg attcagcgcc ataaattcgg gggttttggt
      661 ggcgggggaa cggggcagaa tgtcgtcatg ctcgtatgga atgccgagtt cgaaggccat
      721 ccataaggtg cgctgagcac gggagcgagc agagccgtga atgaccagca tggggatatc
      781 ctttgtcatc gcttccgata attctgcacc ggtctggcga gtcgcctcaa tccccggtcg
      841 ctgcggatgg tggtcccaaa tatcacagag ggcaccaaga tcgccaagaa aaccttgtgt
      901 ttttggagat ctttgggcgc tttgtgatat tctgacatcg cattcagcac gggccggtgg
      961 atgctcggat aacgcttccg ttacgaatcc gataaattcc tgggtcgccc gtgttcgtcg
     1021 actgcaacca gaacaaattc cgcggccgtc acccgcacac gctcaccctg accgcggcgc
     1081 aacacccagg tttccacccc gagtgtaatc gacgttcggc cagtgcgctt cacgtcggtg
     1141 tagacacaga cgacatcgcc gacgtgtacc ggccggagga aactgaggtt cgagaccgcc
     1201 gcagtcacca ctcggccctt ggcctgcgtg ctcgccgcta cgccagctgc cagatccatc
     1261 aacgacatga tccagccgcc gaaaatgtcg ccggccgggt tggtatcggc cggcatggcg
     1321 acggtccgca gcgataactc gcctatcggc tgggaagggt ccatttgcat cgatgcaacc
     1381 tcctgatcca ggtggcacct atgcacaggt tgtggattat tccaggggaa cggaaccggt
     1441 atagcggatg atatccaacc ctccggtgaa ccggtcgttg gcatagatca ggccgtgttc
     1501 atcgacataa acatcattga tttggatcg
//
LOCUS       DATAVD010001218         1585 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2537995, whole genome shotgun sequence.
ACCESSION   DATAVD010001218 DATAVD010000000
VERSION     DATAVD010001218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1585
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2537995"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1231)
                     /locus_tag="VHX39_23295"
     CDS             complement(<1..1231)
                     /locus_tag="VHX39_23295"
                     /inference="COORDINATES: protein motif:HMM:NF013106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HEX3994109.1"
                     /translation="MGRKPGKSFLGRLLRLGVILTIWGLLVLAGIVLWAAYDLPRPET
                     AMDAERRPALVLQDRNGQTFATYGDLVGEPLRLKDMPRELPAALVAVEDHRFYQHGGL
                     DFIGLARAAWVNLTHLRVVQGGSTITQQVAKTLFLTNERTLRRKIRELLLTIWLERTF
                     TKNEILEIYLNRVYLGSGTWGVDAASRMYFGISARKVNLWQSAVLAGLPQAPSRFNPR
                     ANPAAATARAKTVLAAMVQNGALSPERAQAAAAQITFPKVTRQDGAWFADWASDQVQS
                     VLPPDRDATVRTTMDQRLQIAAESALSGMLDGPGAGAGVGQGAVVMLDAASGAVRVMV
                     GGRDYRDSNFNRAVNAHRQPGSAFKPFVWLTALENGLTPADTVLDAPIRIGNWQPENF
                     EREYRGEISLDEALAHSV"
BASE COUNT          291 a          540 c          479 g          275 t
ORIGIN      
        1 tgacggagtg cgccaatgct tcgtccagcg agatttcgcc acggtattcg cgttcgaaat
       61 tctccggctg ccagttgccg atccgtatcg gcgcgtccag caccgtgtcg gcgggagtca
      121 acccgttctc gagcgccgtc agccagacga acggcttgaa cgccgagccc ggttgccgat
      181 gcgcattcac cgcccggttg aaattgctgt cacggtaatc ccgtccccca accatcaccc
      241 gcacggcacc gctcgccgca tccagcatca ccaccgcccc ctgccccact cccgcccccg
      301 ctcctgggcc gtccaacatg ccggagagtg ccgactccgc ggcaatctgc aggcgctgat
      361 ccatcgtcgt ccgcaccgtg gcatcgcgat ccggcggcag cactgattgc acctgatccg
      421 aagcccagtc ggcaaaccat gcgccgtcct ggcgggttac tttggggaag gtgatttgcg
      481 ctgcggcagc ctgagcgcgc tccggcgaca gagcgccatt ctgcaccatt gccgccagta
      541 ccgtcttcgc ccgcgcagtc gccgccgcgg gattggctcg cggattgaac cgcgacggcg
      601 cctgcggcag gcccgccaat actgccgact gccacaaatt caccttgcgg gctgaaatgc
      661 caaaatacat gcgtgacgcc gcgtcgacac cccaggtgcc ggatccgagg tagacgcgat
      721 tcaggtaaat ctcgagaatt tcgttcttgg tgaacgtccg ctccaaccag atcgtcagca
      781 gcaattcccg gatctttcgg cgcagcgttc gctcgttggt gaggaacagg gtcttggcga
      841 cttgttgggt gatggtcgag ccgccctgca ccacgcgcag atgcgtcaga ttgacccagg
      901 ccgcacgggc gagaccgatg aaatcgaggc cgccatgctg atagaaccga tggtcctcca
      961 ccgcgaccag cgcagccggc aactcccgcg gcatgtcctt caggcggagc ggttcgccca
     1021 ccagatcgcc gtaggtcgcg aaggtctggc cattgcggtc ctgcaatacc aacgccggcc
     1081 gccgctcggc gtccatcgcg gtttccgggc gaggcagatc ataagcagcc cagagcacga
     1141 tcccggccag aaccagcagc ccccagatgg tcaggatcac gcccagacgc agcagccgac
     1201 cgagaaacga tttgccgggc tttctcccca tggcgttgcc cggccgggcg cccgcgttcg
     1261 aggatccaac tgcccgggcg gatcgcgaca gcgaacgctg atcagaagcc agcgacgtag
     1321 atctacgcgg catcgggtct cccggggaat cggtgctcct ctttagcaca attcaggcga
     1381 aagcatggtt gtcggtcgtg taacgcaaag gcaaactcgc atcacagacc gcgggaggtt
     1441 ggtatgaagg gcttgttcat ggacgccgtc gacgacctcg cgtcggtatt ctcgcgcgtg
     1501 gtgcggccag acgatccgcc ggtgacggtg aacgagaccg gtaccattgc acccgaggac
     1561 ttgccgggtt tgctcgccgg ctacg
//
LOCUS       DATAVD010001219         7426 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1046177, whole genome shotgun sequence.
ACCESSION   DATAVD010001219 DATAVD010000000
VERSION     DATAVD010001219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7426
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1046177"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..429)
                     /locus_tag="VHX39_23300"
     CDS             complement(<1..429)
                     /locus_tag="VHX39_23300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011077976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEX3994110.1"
                     /translation="MPGERLSMRKIRELLRLRWEQNLPQRVIANSLRLSQGSVSDYLN
                     RGRRAGLTWPLPEALDDARLEALLFPPLPNVPSDQRPVPDWSAVHRDLRRPNVTLALL
                     WEEYRAATTDGFGYSWFCDLYREWAGRLKPTLRQVHIAGER"
     gene            complement(787..2067)
                     /locus_tag="VHX39_23305"
     CDS             complement(787..2067)
                     /locus_tag="VHX39_23305"
                     /inference="COORDINATES: protein motif:HMM:NF018875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis HemY N-terminal
                     domain-containing protein"
                     /protein_id="HEX3994111.1"
                     /translation="MLKVILFLLAGCVILAVAWLLAGIPGHVAASIGAYTVETSTPVA
                     ILILVALVILILILLRIVRTVLAVPRTGAGWRRRHRLVLGDRAVTRALVALAAGEAAV
                     ARKEARRARHLRGDSSQTLLLVAEAARMSAREDEAEEAFRTLTKQKDASFLGLRGLLR
                     QAIDRRDWSEALIIAKQAEAAHPGTAWLRQQRAELALQTENWAEALELIGPDDRRPTY
                     YVAAADAEPDPARALGFARQAWKQDHAFAPATLAYANRLRAAGHEKRAQSCIEDAWKR
                     APHPDLAAFALALEPDKLSRARAAKRLVAGNPIHPESRLLLARAALDAGLTGEARHQI
                     EIAEKEGLKQRRMCLLLAEIEEQERGDTEAGRLAQRDALRRAATAEPDPHWQCTTCRS
                     DHAVWRSKCNVCDGVGTIQWSSDVRTPGLSVVAV"
     gene            complement(2067..3008)
                     /locus_tag="VHX39_23310"
     CDS             complement(2067..3008)
                     /locus_tag="VHX39_23310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994112.1"
                     /translation="MTDQPLLSPPDELSEPVAVAPVVARHDLVPWFYGLGFLILAAAI
                     FYLWQYPSMPNDAVGDSSANHAVERQLADIDGRLARLESRPSTDLTNITARVDALDGR
                     IVDQTQLASRLDTLSGRIEALSGRNQTGLDATRQQLDALTSRVAAIEANAVNLEAVTK
                     RLNRIARLQEASFALASGRPIGDLPNAPEALARYSQTAPPTEAQLRLRFPRDEQAALA
                     AKQPDNSAAPFVDRVWERAQGLITIRRGDDVVVGNPSAVALSRAQVALEAGDLTGAVA
                     AVDTLKGAPAGAMARWVADAKALLGARSALADMADHA"
     gene            complement(3001..3696)
                     /locus_tag="VHX39_23315"
     CDS             complement(3001..3696)
                     /locus_tag="VHX39_23315"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006782 - protoporphyrinogen IX
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEX3994113.1"
                     /translation="MKRVLITRPEPGATETADRIIALGYAPIIAPVLSIITRDVRAPN
                     HAAATLLTSQNAVASCPPCLHDRPVFAVGTATAKRATEAGFKHVFNANGDANSLARLV
                     ADTLSPAEGRLFLPTGQGQGTDLAASLRQRGYRIVRRVAYQAVGVSVLPEPAAICLRQ
                     HQLAAAMFFSGDTARHFVRLLRAATLSDAVRDIEAVSISERAAVALRHLPWRRISVAA
                     KPNQEAMLALLDD"
     gene            3838..4890
                     /gene="tsaD"
                     /locus_tag="VHX39_23320"
     CDS             3838..4890
                     /gene="tsaD"
                     /locus_tag="VHX39_23320"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEX3994114.1"
                     /translation="MKPVLGIETSCDETAAAVVDGEGRILAEAVLSQFREHAPFGGVV
                     PEIAARTHLRYLSQQIRHTMTEAGIGFADLGGVAATSGPGLIGGLIVGCQFGKGVAIA
                     SHLPFVAVNHLEAHALTARLPGLVEGGAPFPYLLFLLSGGHSQCLAVTGIGQHVRLGG
                     TVDDAVGEAFDKVAKLLGLDWPGGPALEKIAAEGDPARYPFPRPMARRPGCDLSFSGL
                     KTAVAQAIVRTGSELTRKQRADVAASFQQAVVVVLADRATHAMDMMRERFPRANLLVV
                     AGGVASNAAVRTGLANAAMSRGFKLVAPPVRLCSDNAVMVAWTGIERLRRGSSDRLET
                     NARPRWALDTLEAVPG"
     gene            4887..5705
                     /gene="rlmJ"
                     /locus_tag="VHX39_23325"
     CDS             4887..5705
                     /gene="rlmJ"
                     /locus_tag="VHX39_23325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HEX3994115.1"
                     /translation="MNYRHAYHAGNFADCFKHALLITLLDSLARKPAPYFVLDTHAGA
                     GGYDLQAEAARRTNEATSGIRRLLQKSSPVLERYLGLVERLGLYPGSPALIRTALRSD
                     DRLICCELHPEDAATLRQRFRHDVQVEVHERSGWEALGALLPPRERRGLVFIDPPFEA
                     QNEFHILMDGLRRGHLRFGHGVFAAWYPVKRMAAVREFHAALAASGIPDIISIELHLR
                     EPIDPDRLNGCGLIVINAPYQFEIQAQSIANAVLDGLGGDEIGAGTTVVRLTDE"
     gene            5698..6660
                     /locus_tag="VHX39_23330"
     CDS             5698..6660
                     /locus_tag="VHX39_23330"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEX3994116.1"
                     /translation="MSKLAVIGAGAWGTALSLQAMRAGHRVALIARDAATASAIEASR
                     ENRRLPGYRLPETLELRHDLPDDADLSLWVVPTQHLRSSLLRLRPSRGAIVVGSKGVE
                     AQTGLLPLEVANEVFPSLALAVLTGPNFAHEVAKGLPAAAVVASTDASVREQVRAMLG
                     TSTFRLYGNDDPIGAQLGGAAKNVIAIAAGAVTGAGLGENARAALITRGLSELRRLGI
                     ALGGRAETVMGLSGLGDLLLTCTGPSSRNFSLGHALGRGETLSAILAGRSEVTEGVLT
                     AAALVGRAGEIELPICRAVADLLAGVKTLNEAITQLLSRPQRDE"
     gene            6700..>7426
                     /locus_tag="VHX39_23335"
     CDS             6700..>7426
                     /locus_tag="VHX39_23335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010667302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HEX3994117.1"
                     /translation="MLTVGGWTLFSRLLGFARDMLIAALIGTGPIADAFFVALKLPNL
                     FRRLFGEGAFNAAFIPAFTGLLHTEGHGAAKQFAQEAFAVMAFWLGIMTILGEIFMPN
                     LMVVLAPGFAENPSKFALAVSLSRITFPYLVLICLAALVSGVLNGLEKFTAASASYVL
                     FNIVSIACMLWMTPYVPTVGHALSWGVTISGIMQLGLLMMAVRRGGMALQIPRPRMTP
                     QMRLLMRRMAPGLVGAGVTQLNLT"
BASE COUNT         1375 a         2175 c         2402 g         1474 t
ORIGIN      
        1 ccgctcgccc gcgatatgca cctggcgcag cgtgggcttc agccgccccg cccactcgcg
       61 atacaaatcg cagaaccacg agtaaccgaa cccatcggtt gtcgccgcgc ggtattcctc
      121 ccacagcagc gccagcgtca cattcggccg ccgcagatcg cgatgcaccg cagaccaatc
      181 cggaaccggg cgttgatcgg acggcacatt cggcagcggc ggaaacagca gtgcctccaa
      241 ccgagcgtcg tccagcgcct ccggcagtgg ccatgtcaag ccagcgcggc ggcctcggtt
      301 gaggtaatcg ctgactgagc cttggctcag ccgcaggcta tttgcgataa cgcgttgtgg
      361 taaattctgc tcccatcgca gccgtagaag ctcccgtatc tttcgcatcg acaatctctc
      421 gcctggcatc tcgacctctt gctcctcggc aaaagatcga cactaccctc ggttgaagac
      481 tgccagcggc agccgtccgg cgccgtcatc tccgtaatga tcgggatcac cggaatcgat
      541 gatcacgatc caccggaatg catgatcagg atcgaacgga ttcgatgatc acgatcaaac
      601 ggaatcagtg atcaagatcg accggaattc gcatggagcg catctctatt ttggaatgat
      661 tgtcgacggt cacccgatcg accccgcacc ctatctcaaa gtcgttccct gcaaatcggc
      721 tacgcgggcc ggtcagcacg accatatccg tcctgtcgac acaccggctg gacactgatc
      781 cgatgattag acggcgacga cggacaggcc aggtgtccgc acatcgctcg accattggat
      841 tgttccgacg ccatcgcaga cattgcattt ggaacgccat acagcatgat ccgaacggca
      901 ggtcgtacat tgccagtgtg ggtcaggttc ggcggtcgct gcccggcgaa gggcgtcacg
      961 ctgggcgagg cggccggctt cggtatcgcc acgctcctgt tcctcgattt cggctaggag
     1021 caggcacatg cgccgttgtt tcaatccctc tttctcggcg atttcgatct gatgtcgagc
     1081 ttcgcctgtc aatccggcgt cgagagcagc acgcgccaaa agcaaccgac tctcgggatg
     1141 gatgggattt cccgcgacca ggcgcttggc ggctcgggcg cgtgacaact tatccggctc
     1201 caaggccaag gcgaatgccg ccagatcggg gtgcggggca cgtttccaag catcctcgat
     1261 gcatgattgg gcgcgctttt catggccagc cgcccgaagg cgatttgcgt aggcaagtgt
     1321 agccggcgca aaggcatggt cctgcttcca ggcctgcctt gcgaagccta gagcgcgggc
     1381 tggatcgggt tctgcgtcgg cggccgcaac ataataggtg gggcggcggt cgtctgggcc
     1441 gatcagttcg agcgcttcgg cccagttttc tgtctgcagt gccagttcgg cacgctgctg
     1501 acgaagccag gctgtaccgg ggtgggcggc ttcggcctgt ttggcgataa tcagtgcctc
     1561 ggaccagtcg cggcggtcga tagcctgacg cagcaaacca cggagcccaa ggaaactggc
     1621 atccttttgt ttcgtcagag tgcggaacgc ttcttccgcc tcgtcctctc gcgccgacat
     1681 tcgtgctgct tcggcgacca gcagtaaagt ttgagacgag tctcctcgca aatggcgggc
     1741 tcgtcgagct tctttgcggg cgacggcagc ctcccccgcc gcgagagcga ctagggcgcg
     1801 ggtcaccgct ctgtctccca aaacaagacg atggcggcgc cgccatccgg cacctgtgcg
     1861 ggggaccgcc aatacggtcc gcacgatccg cagcagaatg aggatcaaga tgaccagagc
     1921 gaccaggatc aggattgcga ccggggtcga ggtttcgact gtataggcgc caattgacgc
     1981 cgcaacatga cccggaatgc cggccagcag ccacgccacc gccaagatga cgcagccagc
     2041 cagaaggaag agaataacct tcagcatcac gcgtgatcag ccatgtcagc caacgcggac
     2101 cgtgcgccca acaatgcctt tgcatcagcc acccaccttg ccattgcacc ggccggcgcg
     2161 cctttcaatg tgtcgaccgc ggcaaccgca ccagtgagat cgccggcttc aagcgcaacc
     2221 tgggcacggc tcaatgcgac agcagatgga ttaccgacca cgacatcgtc cccgcgcctg
     2281 atagttatca ggccctgagc tcgctcccag acacgatcca cgaagggggc ggcgctgttg
     2341 tccggctgct tcgcagccag tgcggcttgc tcgtcccttg gaaagcggag tcgaagctga
     2401 gcctcggtcg gtggcgcggt ctgggaatag cgcgcaagcg cttccggcgc attcggcaga
     2461 tcaccgatgg gacggccgga tgcgagtgcg aaggaggcct cctgaagcct cgcgatgcgg
     2521 ttgagccgtt tggtaacggc ctcaaggtta actgcgttcg cttcgatggc cgcaacccgg
     2581 cttgtcagcg catccagttg ctgcctggtc gcatcgaggc ccgtctgatt tcggcctgac
     2641 aaggcttcga tccggccgga caatgtatcc agccggctgg caagctgtgt ttggtcgaca
     2701 atgcgaccgt cgagcgcgtc aacacgagcg gtgatgttgg tcagatcggt ggatggacgg
     2761 gattccaggc gcgctagacg gccatcgatg tcggcgagtt gccgttcgac ggcatggttt
     2821 gcggaagaat caccaacagc atcattcggc atactgggat attgccaaag atagaaaatg
     2881 gcggcggcga gtatgaggaa acccaagccg tagaaccatg gaacgaggtc gtgccgtgca
     2941 acaaccggtg cgaccgcgac gggttcggac aattcatcgg ggggtgacag caacggttgg
     3001 tcagtcatcg agcagcgcca gcatcgcttc ctggtttggc ttcgcggcga cactgatgcg
     3061 ccgccaaggg agatgcctta atgccacggc ggcccgctcg ctgatagaca ccgcttcgat
     3121 atcgcggacg gcgtcagata acgtggctgc ccgaagcaga cgcacgaaat ggcgggccgt
     3181 atccccggaa aagaacatcg cagccgccaa ttggtgctgt cgcaggcata tggctgctgg
     3241 ctcgggtagc accgaaacac cgactgcctg gtacgcgacg cgtcggacga tgcggtagcc
     3301 acgctgtcgg agcgaggcag ccagatcagt cccctggccc tgccccgttg gcagaaacag
     3361 cctgccctcc gccggcgaca gtgtgtccgc gaccaggcgg gcgagcgaat tggcgtctcc
     3421 gttagcgttg aacacgtgct tgaagccggc ctcggtagcg cgcttcgcgg ttgcggtgcc
     3481 aacagcgaaa acggggcgat catgcagaca gggcggacat gacgcgacgg cgttttggct
     3541 ggtcaacagc gtcgcggcag catgattggg cgcacggaca tcccgagtga tgatggacag
     3601 gaccggcgct atgatcggcg cataaccaag ggcgatgatg cggtcggcgg tttcggtagc
     3661 gccgggctcc ggcctggtaa tcaaaacgcg cttcaaggaa ctgctcttgt caaagagcct
     3721 ccggtcgatg atgtgtggca cgcggtgaac acgtcatatc ctactcctgg acgtgttacc
     3781 ggcaagaccg atgacagggt gcgatatccg cgacaggatg tcggctagaa aggtgtgatg
     3841 aagccggttc tggggatcga aacgtcctgt gatgaaaccg ccgcggcggt tgtggatggc
     3901 gagggacgca tcctagccga agccgtgttg agtcaattcc gcgaacatgc gccatttggc
     3961 ggggtcgttc cggaaattgc ggctcggacg catctccgat atctttcgca acagattcgc
     4021 cacacgatga ccgaggctgg catcgggttt gccgacctgg gaggcgtggc ggcgacgtcg
     4081 ggccccgggc tgattggcgg gttgatcgtt gggtgccagt tcggcaaggg cgtggctatc
     4141 gccagtcacc tcccgttcgt ggccgtgaat cacttggagg cacatgcgct gacagcccgt
     4201 ttgcccggtt tggtggaagg cggcgcccca tttccctacc tattgttcct gctttccggc
     4261 ggacattcgc agtgtcttgc ggtgaccggc atcgggcagc acgtgcggtt gggtgggacg
     4321 gtagacgatg cggtcgggga ggccttcgat aaggttgcga agctgttggg gttggattgg
     4381 ccgggtggac cggcgttaga gaagatcgct gccgaaggtg atccggcgcg gtatcctttt
     4441 ccccggccga tggcacggcg gccgggctgc gacctaagtt tttcaggtct gaagaccgcg
     4501 gtcgcgcaag caatcgtgcg aacgggatcg gagctcacgc ggaaacagcg tgcggatgtc
     4561 gcagccagct tccaacaggc tgttgtagtt gtccttgccg atcgggccac acatgcgatg
     4621 gatatgatgc gggaacgctt tccacgggcg aatcttttgg tggtcgccgg cggagtggcg
     4681 tcgaacgccg cggttcggac aggcctcgcg aacgcggcca tgtcccgggg gtttaagctg
     4741 gtcgcgcccc cggtcaggct gtgttccgac aacgcggtca tggtcgcctg gaccggtatc
     4801 gagcggctgc gacgtggctc gagcgatcgc cttgaaacga atgcccgacc gcgttgggcg
     4861 cttgatacgc tggaagccgt tccgggatga actaccgcca cgcgtatcac gccggcaact
     4921 tcgccgattg cttcaagcat gcattgctga tcacccttct cgattccctg gcgcgtaagc
     4981 cggcgccata ttttgtgctg gatacgcatg cgggtgcggg cgggtacgac ctccaagccg
     5041 aagcggcccg gcggaccaac gaggccacat cggggatacg gcgtctgctt cagaagtcct
     5101 cgccggtgct ggagcgctat cttgggttgg tggaacggct tggtctctat ccgggctctc
     5161 ccgcattgat ccgaacggca ttacgcagcg acgaccgcct gatctgctgt gaactccatc
     5221 cggaggatgc cgcgaccctg cggcaacgat ttcgccatga tgtccaggta gaggttcatg
     5281 aacggtcggg gtgggaggcg ttaggcgccc tcctgccgcc tcgggaaagg cgcgggctgg
     5341 ttttcatcga tccgccgttc gaggcacaga atgaattcca tatattgatg gatggcttac
     5401 gtcgtggcca tttacggttc ggtcacggcg tgttcgccgc ctggtatccg gtcaagagaa
     5461 tggccgctgt acgggagttt catgcggctc tggcagcgtc tgggatcccg gatattatct
     5521 cgatcgaact tcatctgcgg gagccaatcg atccagatag gcttaacgga tgtggtctta
     5581 tcgtgatcaa tgcaccatac caatttgaga ttcaggcgca gtctatcgcc aacgccgtac
     5641 tggacggact tggtggcgac gaaatcggag cgggaacaac cgtcgtcagg ctgaccgatg
     5701 agtaagcttg ccgtgatcgg cgccggagcc tgggggaccg cgttatcgct tcaggcgatg
     5761 cgagctgggc atcgcgtcgc gttgattgcg cgggacgcag ctacggcctc cgccatcgaa
     5821 gcgagcagag aaaaccgacg cctaccggga taccgcctgc cagagacact tgagctacgt
     5881 catgatcttc ccgatgacgc cgacctgtca ctatgggtag ttccaacgca gcatcttcgc
     5941 tcgtcacttt tgcgccttcg accgtcgcgt ggcgcaatcg tcgtcggttc caagggggtg
     6001 gaggcgcaga cgggtctctt gccattggag gtggccaacg aggtatttcc atctctggcg
     6061 ctcgcggttt tgactgggcc gaattttgcc cacgaagtgg cgaaggggct gccggctgcc
     6121 gcggtggtgg ccagcacgga tgccagcgtt cgggaacagg tgcgtgcgat gctggggacc
     6181 agcacctttc gcttgtatgg caacgacgat cccattggcg cgcagctcgg tggggccgcg
     6241 aagaacgtca tcgcgattgc cgcaggtgcg gtaacgggcg cgggattggg tgaaaacgcc
     6301 cgtgcggcgc tgataacgcg tggattgagc gagctgcgcc gcttgggaat tgccctcggt
     6361 ggacgggcgg agacggtgat gggcctatcc ggcctgggag acttgttgct gacctgtacc
     6421 gggccttcaa gccggaattt cagcctgggt catgcacttg gacggggtga aaccctttcg
     6481 gcgatactcg ccggccgatc ggaagtgact gaaggagtat tgacggccgc cgcgcttgtt
     6541 gggcgagcgg gggagatcga actgccgatt tgccgtgcgg tggcggattt gctggctggg
     6601 gtgaaaacgt tgaatgaggc gatcacgcag cttttgtcgc gcccccagcg ggatgagtga
     6661 ggaacacatg attccaccgg gtcaaacatg ctgaggggcg tgctgaccgt cggcggttgg
     6721 acactgttca gccggcttct ggggttcgcg cgggacatgc tcatcgccgc gttgatcggc
     6781 accggcccaa tcgcggatgc attttttgtc gctctgaaat tgccgaacct gttccgccgc
     6841 ctgtttggcg aaggtgcgtt caatgcggcg ttcatcccgg ctttcacagg gttgttgcat
     6901 acggaaggcc acggcgcggc gaagcagttc gcgcaagaag ctttcgcggt gatggccttc
     6961 tggctgggaa tcatgacgat cctgggcgag atcttcatgc cgaacctcat ggtcgtacta
     7021 gcgccaggct tcgcggaaaa cccaagcaaa ttcgcccttg ccgtcagcct gtccaggatc
     7081 acgtttcctt acctcgtact aatctgtttg gctgccttgg tctcgggtgt tctgaacggg
     7141 ctggagaaat ttaccgccgc ctcggcgtcc tacgtacttt tcaacatcgt ctcgatcgca
     7201 tgcatgcttt ggatgacacc ttacgtgcca acggttggtc acgcactgtc ctggggcgtt
     7261 acgatatccg ggatcatgca actcggcctg ctgatgatgg cggttcggcg cggtggcatg
     7321 gcgctccaaa ttccgcggcc gcggatgacg ccgcagatgc gtctgttgat gcgccggatg
     7381 gcaccgggtc tcgtgggtgc gggcgtgacg cagcttaacc tcacgg
//
LOCUS       DATAVD010001220         3913 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2348090, whole genome shotgun sequence.
ACCESSION   DATAVD010001220 DATAVD010000000
VERSION     DATAVD010001220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3913
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2348090"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1359..1664
                     /locus_tag="VHX39_23340"
     CDS             1359..1664
                     /locus_tag="VHX39_23340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994118.1"
                     /translation="MLEQSPVAASFFLDPTGAPIGEEWVEEGLAYAELDLAARIEPKR
                     FHDVAAGYNRFDVFDLSVHRRRPEPVAFQDLVAAEPTGGPAEETESRRSPLRIAVGD"
     gene            1686..2444
                     /locus_tag="VHX39_23345"
     CDS             1686..2444
                     /locus_tag="VHX39_23345"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX3994119.1"
                     /translation="MTHEGFKLVTPPDGVHALTERLTADSDVFLVTHMGLAAIEPETW
                     WLDIEGLVDRPTRLTLADLASSPTVSVTAIHECAGSPLAPTEPKRRVGNVTWSGVPLS
                     AVLAHAGVRASASFIWSEGLEWGSFAGMTREAFVKDLPLWKVPDALLARHLNGESLSP
                     DRGGPVRLVVPGWAWAECGVAAVEVSVGDDAWRPAELAPRDGFAWQHFSSSWTPLVPG
                     RYCMACRCVDMLGRSQSDAGARNAVHAIEVEVAS"
     gene            2553..>3913
                     /locus_tag="VHX39_23350"
     CDS             2553..>3913
                     /locus_tag="VHX39_23350"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX3994120.1"
                     /translation="MTVDDIGAGYDCGDFSPTDVVSACIERIASLEPFLNAFIAINSR
                     MLEDAALMDAEIAAGGRRGPLHGVPVIIKDNMNQTGFRTTAGYAGFASDDRVVDPTIG
                     TFNGIDLVPQADATLVARLKAAGAVIVGKSNLPDFGLDGLRADSSHNGDTLNPYGASF
                     APGASSTGSATGVSAGFAPVAIGTDTAGSILFPASAQSLVGIKPSFGLVPTDGIFPGL
                     SSHHDVAGPIAKTVRDAATVLEIIAAAPPNADGRGYVQALRKGALQGKVLGLFEPGEW
                     AVDLHPEIADHYQRMIRVVESLGARTVNVVFSDTDFKEAWDARVFFAGCNSYLAGVDE
                     FLTGLGGANPASRKAFAERAGFEIGLATTAPLYALLANPAINVAPDAPELAAVIDQAN
                     RLYDEYQSILNAKSIDALFVPRSVAPLPDLSGNTLQYLGDQVSGTQVNEMGLPVITVP
                     AGQL"
BASE COUNT          686 a         1261 c         1257 g          709 t
ORIGIN      
        1 tgcttcgtca cgccattcgt ccgcgcggag cctcagcgcc aggatatcga attcaccagc
       61 cactcgcgcc ccttcaagac agtcagcatc cgctgggtac ggtacgcaca gaatctgggc
      121 tcggatcaca tccttttcgc agatgcagca aatgatcgct tcgagaccat ggaagcaggg
      181 ccttggcggt ctgtctgtgc gggcgccgat catcagatgc ctgtacgatg tccgcctatc
      241 tcgactcgca tctatgttcc taatacgttc ataagatgcc agagagaccg tccaaaacct
      301 ggggggtcga agctcggctg atcggggtgg agcacagcgg aatcgacatc tcgatggtat
      361 gcccgttctg ttctcccccc aggttttgga cggtctccat tcgcccagct ggacgcggac
      421 ggtgctctgg cacaggcacg tgccttggac ctacagcggt ccggaggcgg cgcgttaggt
      481 ccgctgcacg gagtccccgt ggctataagg gacatcgtcg acaccgtcga ttttccgaca
      541 gagcatggtt ccaaattgtt tgccggccga cggcccgtcg tggtcgcgac cgtcgttcgg
      601 aagctgcgcg ccgcaggcgc tgtaatcatc ggcaaagcgg tgaccaccga gttgggtctg
      661 atgcattcgg gcaagacccg caacccgagg gacacgactc gaacgccggg tgggtcgtcg
      721 tccggatccg cagttccggt atccgcgggg atgatgccac tatcgatcgg agcgcaaacc
      781 agcggttccg tgatccgtcc ggcgtcctat tgcggcgtgc tcggcatcaa acccacctac
      841 cgattggtct cctgcgaggg cgtcttgccg gcatcccgga cgctcgacac aatgggggca
      901 ttcgcagggg ccatcgagga tctggcgctg atacttgacg gcatcgccga agacgatgtc
      961 ccagacatcc acttccggcc atcccgcgat gccggggttc gagccatgct agcgaacgca
     1021 ccgcacgagc agcccaaagt cgcactcgtg cgcacgccaa tgtgggacca ggcggctgcc
     1081 gaagcccgtg atgcccttga ggcgttagcc accgagcttg gagcacggcc gctcgaactg
     1141 cttgacttcg cgcgcgaagc atggtccgta cgtcgcgtga tcttcgcggc cgaactcgcg
     1201 ggcaatctca gccccagtct gagagccggc gcggatttga gcgatgctct tcgtgccttc
     1261 gccgaggagc gacttcgcat gacgcgaaac gcctatgaac cagcattgac cgtgttgcgc
     1321 gtgccgatct tgccgcggat gattccgaag ccgcagccgt gctggagcaa tccccggtcg
     1381 ccgctagctt ctttctcgac ccgaccggtg cgccgattgg cgaggaatgg gtggaggagg
     1441 gcctggctta cgccgaactc gacctggcgg cgcgtatcga gccaaagcgc ttccacgacg
     1501 tcgccgccgg ttacaaccgt ttcgacgtgt tcgacctcag cgtacatcgc aggcgtccgg
     1561 agccggtggc gttccaggat ctcgtcgcgg ccgaaccgac tggcggaccg gccgaggaaa
     1621 ccgagagccg tcgctcgccg ctgcggatcg cggtcggcga ctgagccatg cgtcccggcg
     1681 tccgaatgac ccacgaaggc ttcaagctag tgacgccgcc ggacggggtc catgcgctca
     1741 ccgaacggct gacggcggac tcggacgtgt ttctcgtgac gcatatgggc cttgccgcta
     1801 tcgagccgga aacatggtgg ctggacatcg aagggctggt ggaccgaccg acccggctga
     1861 cgcttgccga tctggcgtcc tcgccgaccg tctcggtcac tgcaatccat gaatgtgcgg
     1921 gtagcccgct ggcgccgacg gagccgaagc gtcgggtcgg taacgtcaca tggtcgggcg
     1981 tgccgctctc ggccgtgctg gcccatgcag gcgtgcgcgc gagcgcgtca ttcatctggt
     2041 cggagggact cgaatggggc agcttcgctg ggatgaccag agaggcgttc gtcaaggacc
     2101 tgccgctgtg gaaggtgccc gacgcgctgc ttgccagaca tctgaacggc gagtcgctct
     2161 cgcccgaccg cggcggcccg gtccggctcg tggtgcccgg ctgggcatgg gcggaatgcg
     2221 gcgtcgccgc cgtcgaggtc tctgtcggcg acgacgcgtg gcggccggcg gaactggcac
     2281 cacgcgatgg gttcgcctgg cagcacttct caagcagctg gacgccgctc gtgcccggtc
     2341 ggtactgcat ggcgtgtcgt tgcgtcgaca tgctgggacg aagtcagtct gacgccggcg
     2401 cacgcaacgc cgtccacgcc atcgaggtcg aggtggcgtc atgagggtga aactcctttc
     2461 tcagaacaga agtcgaggac tccatgcgac acctcagcct gccaaagatc gacacctcac
     2521 ggacccggcc gccaatgccg cccatcgaga gcatgaccgt cgacgatatc ggcgccggct
     2581 acgactgcgg tgacttctcg ccgaccgacg tggtgagcgc ttgcatcgag cgcatcgcgt
     2641 cgctcgagcc gttcctcaac gccttcatcg cgatcaattc ccggatgctc gaggacgcgg
     2701 cgctgatgga tgcggaaatc gcagccggtg gccgccgcgg gccgctgcat ggcgtccccg
     2761 tcatcatcaa ggacaacatg aaccagaccg gcttccgaac cacggccggt tacgcgggct
     2821 tcgcctcgga tgaccgggtc gtggatccga cgataggcac cttcaacggc atcgacctcg
     2881 ttccccaggc cgatgcgacg ctggtcgctc gtctgaaggc cgccggtgca gtgatcgtcg
     2941 gcaaaagcaa cctgcctgat ttcggccttg acggcctgag ggccgattcc agccataatg
     3001 gcgacacgct taacccctac ggcgcatcat tcgcgcccgg tgcatccagc acggggagcg
     3061 ccaccggggt ttccgcgggt ttcgcgccag tcgcgatcgg cacggacacg gccggctcga
     3121 tcctctttcc ggcatcggcc caaagcctgg tcgggataaa gccgagtttc ggactggtgc
     3181 cgaccgatgg gatattcccc gggctgtcca gtcatcatga cgtggccggg ccgattgcca
     3241 agaccgtccg cgatgcggcg accgttctgg agatcattgc cgcggcgccg ccgaacgccg
     3301 acggccgggg ctatgtacag gcgctccgca aaggcgcgtt gcagggcaag gtcctcggcc
     3361 tgttcgaacc cggcgaatgg gcggtcgatc tgcacccgga aatcgcggat cattaccaac
     3421 ggatgatccg agtggtggaa tcgctgggcg cgcggacggt caacgtcgtg ttctccgata
     3481 cggacttcaa ggaagcttgg gacgcgcgcg tcttctttgc tggctgcaat tcgtacctgg
     3541 ccggcgtaga tgagtttctc accggcctcg gaggcgccaa cccggcgtcg cggaaggcct
     3601 tcgcagaacg cgcgggtttc gagattggtc tcgcaacaac tgctccgctc tacgctctgc
     3661 tcgcgaaccc agccatcaac gttgcgccgg acgcaccgga acttgctgcc gtgatcgatc
     3721 aggcaaaccg tctctacgac gaataccagt cgatactgaa cgccaagtcg atcgatgcgc
     3781 tcttcgtgcc gcgatcggta gcgccgctgc cggatctgag cggaaacacg ctccaatatc
     3841 tcggtgacca agtatccggc acgcaggtga acgaaatggg attgccggtc atcaccgtgc
     3901 cggctggaca gct
//
LOCUS       DATAVD010001221         1914 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1977672, whole genome shotgun sequence.
ACCESSION   DATAVD010001221 DATAVD010000000
VERSION     DATAVD010001221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1914
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1977672"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..201)
                     /locus_tag="VHX39_23355"
     CDS             complement(<1..201)
                     /locus_tag="VHX39_23355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994121.1"
                     /translation="MFIATCLIILLLSLCILFMSLMIWLAHSLEGYPALLISRANRDA
                     VQLPQHLFVPNGSAMLDALANGR"
     gene            614..>1914
                     /locus_tag="VHX39_23360"
     CDS             614..>1914
                     /locus_tag="VHX39_23360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HEX3994122.1"
                     /translation="MSGPDRYQWRRDKDGLGVWEHRGKVAVAGVGHSPVDRRWDEVSM
                     DKTLGAYCILACQKAMDEAGVTADQVDGIICCDSHIAGGSGGSASQWAPRPYLAPPYD
                     SEWGLTLVNAQWLIAQMGLTNVKFAPTGLPTISEMVGMAAQAVGDGVCNTCLVIYPTG
                     NLEGRYRRGGENADDYARGARQWTAPWGNHGGNDFINIFPHGQYCRKYGGKHDDLAPF
                     VVNQHRNGLLTPWGFNATHKVPQLTVEEYVNSRYTLNPLRLWDCDRPVNASTAYLFTT
                     AERARDMRQKPVYVLNHSQHNFRQRSTQADLEQIEDWTDRAAASMYEGAGLGPADVDV
                     FNPYDGYAPMAQFFLEAFHWHGVKRGDAFAFYAGDIKVEGPHPLCSSGGNLGNGRTRT
                     AMYTDCIEQLRGTAGARQVKVRAETALGAFTTPSSGGWIMFG"
BASE COUNT          388 a          565 c          627 g          334 t
ORIGIN      
        1 ccgaccgttc gcgagcgcgt ccaacattgc cgatccgttt ggtacgaaca gatgctgcgg
       61 caattgcaca gcgtcacggt tggcgcggga gatcagcaac gcggggtaac cctcaaggct
      121 atgggccagc caaatcatca atgacatgaa caggatacac aggctcagga gcaggattat
      181 caaacaggtt gcgatgaaca tcggatgact cccttgcggg cttaacagcg gaattcgtgt
      241 gcctgctaat ctttaactat cgtccacctg ctcaaccgac ccgggcaaaa tccgcggtga
      301 tttccgtgag ccaacagcaa cagggtgtct gaccgcgcag acgcccgcaa tgagaacgcg
      361 tcctccatcc gatcagcata cccctggcga aaccacgacc gatcgctttg acaacggttg
      421 agatcgggca cagttccacg ccgagacgtc gcgcgatcgc ctttcccgtc gcctccagca
      481 aaggtcggat tgttttacgg ttggcgccgc ccaccttcga acaaggctcc ggccacctgg
      541 caaagcctcc gtttcgaggt attggttcgt cggtgataca gtcactgcca aagcacagag
      601 gaagggcgga gccatgagcg ggccagaccg gtatcaatgg cggcgagaca aggacggcct
      661 tggcgtttgg gagcaccgcg gcaaggtcgc cgtggccggc gtcggacatt cgccggtcga
      721 ccggcgctgg gacgaagtct cgatggacaa gacactgggt gcctactgca tcctggcctg
      781 ccagaaggcg atggacgagg caggcgtgac ggccgatcag gtcgacggca tcatctgctg
      841 cgacagccat atcgcaggcg gcagcggcgg ctcggcgtcg caatgggcgc cacggccgta
      901 cctggctccg ccgtatgatt cggaatgggg gcttaccctg gtcaacgcgc agtggctcat
      961 cgcgcagatg gggctgacca acgtcaaatt tgctccgacc gggctgccga ccatcagcga
     1021 aatggtgggc atggcggcgc aggcggtggg tgacggcgtt tgcaacacct gtctggtgat
     1081 ttatccgacc ggcaatctcg agggccgcta tcggcgcggg ggcgaaaatg ctgacgacta
     1141 cgctcgcggg gcgaggcaat ggacggctcc ctggggcaat catggcggca acgatttcat
     1201 caacattttc ccgcatggtc agtactgccg gaaatacggc ggcaagcacg acgacctggc
     1261 gccgttcgtt gtcaatcagc accgtaacgg gctgctgacg ccgtgggggt tcaatgccac
     1321 gcacaaggtg ccgcaactga cggtcgagga gtacgtcaat tcgcgttaca ctctgaaccc
     1381 gctgcggctg tgggactgcg accggccggt caatgcgtca accgcgtatc tgttcacgac
     1441 ggccgagcgc gcccgcgaca tgcggcagaa gccggtctac gtgctcaatc actcccagca
     1501 caatttccgg cagcgcagca cacaggccga tctcgaacag atcgaggact ggaccgatcg
     1561 tgccgccgcg agcatgtacg agggtgccgg actgggaccg gctgacgttg atgtattcaa
     1621 tccgtacgac gggtatgcgc cgatggcgca gttcttcctg gaggcgttcc actggcacgg
     1681 cgtcaagcgc ggcgatgcgt ttgcattcta cgcaggcgat atcaaggtcg agggaccgca
     1741 ccccctgtgc tcgagcggcg gcaatctggg gaacgggcgc actcggacgg cgatgtacac
     1801 cgactgcatc gagcagttgc gcggcacggc cggggcgcgg caggtgaagg tgagggcgga
     1861 gacggcgctg ggggcgttta cgacgccgag cagcggtgga tggattatgt ttgg
//
LOCUS       DATAVD010001222         2685 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_121003, whole genome shotgun sequence.
ACCESSION   DATAVD010001222 DATAVD010000000
VERSION     DATAVD010001222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2685
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121003"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(118..600)
                     /locus_tag="VHX39_23365"
     CDS             complement(118..600)
                     /locus_tag="VHX39_23365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019088889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994123.1"
                     /translation="MTDFGIARAVHLVMVVLWIGGVGMVTTVLLPRIRRSHLPNERFG
                     VFHAIEARFANQARWTTGLAGLSGLYMVWRIDAWDRFTSANFWWMHAMVATWLVFTLM
                     LFVAEPFFLDRWLERRAVRDPEAAYRLVERLHWMLLTLGLVTIAGAAAGVAGVNLAAF
                     "
     gene            complement(632..2263)
                     /locus_tag="VHX39_23370"
     CDS             complement(632..2263)
                     /locus_tag="VHX39_23370"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEX3994124.1"
                     /translation="MTRFVFITGGVVSSLGKGIAASALGALLQARGYSVKLRKLDPYL
                     NVDPGTMSPTQHGEVFVTDDGAETDLDLGHYERFTGVHATQLDNATTGRIYSEVILRE
                     RRGDYLGATVQVIPHITDAIKDVIQRDTDQFEFVLIEIGGTVGDIESLPFLEAIRQLG
                     NDLGPERSMFVHLTLVPYIPSAGELKTKPTQHSVKELLNVGIQPKMLLCRCDRPIPDA
                     ERRKIAAFCNVRAEAVIPALDVPNIYWVPIRYHEEGMDREVLRHFDLPADGAPDLSRW
                     WNIVDAMTTAEGDVRIAIVGKYTNLLDSYKSLAEALAHGGIANRVRVQIDWVDSEEFE
                     KPSAVQRLEDVHGILVAPGFGERGTEGKIEAVRFARERRVPFLGICFGMQMAVIEAAR
                     NLADMPGASSTEFGPCRDPVVGLLTEWARGNQIVHRSEHDDKGGTMRLGAYPAVLEPG
                     SLVRSIYGDQPCIEERHRHRYEVNVNYRERLEATGLRFCGMSPDGVLPEIVELPGHPW
                     FVGVQYHPELKSKPFDPHPLFAHFIAAAVHQSRLV"
     gene            complement(2337..2663)
                     /gene="secG"
                     /locus_tag="VHX39_23375"
     CDS             complement(2337..2663)
                     /gene="secG"
                     /locus_tag="VHX39_23375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEX3994125.1"
                     /translation="MSTVLLIIHLFVTLALIGVVLIQRSEGGGLGIGTSQGMGSFMSG
                     RGTANLLTRATAILATAFMALSLSLALLNRGTMGTSRSILDTAPAQTLPAAPPPKPAA
                     PSAPSN"
BASE COUNT          543 a          814 c          838 g          490 t
ORIGIN      
        1 ccgatgtttc agtttgaccg tctcgccttc gcggacacgg aatggggata caggaattgc
       61 catgaccggg agaattggcc cgtgcgggtc cgctcgcaag tccatccttc cgcaggatca
      121 gaatgccgcc agattgacac cggcaacgcc ggcggcggct ccggcgatgg tgaccagacc
      181 aagcgtcagc aacatccaat gcagccgttc cacgagccga tacgccgcct cgggatcgcg
      241 cacggctcgg cgttcaagcc atcgatcgag gaaaaatggc tcggcaacga acagcatcag
      301 cgtgaacacg agccatgtcg caaccatggc atgcatccac cagaagttcg cagatgtgaa
      361 acggtcccag gcatcgatgc gccagaccat atagaggccg ctcaatccgg cgaggccagt
      421 cgtccaacgg gcctggtttg caaaacgtgc ctcaatcgcg tgaaatacgc cgaaccgttc
      481 gttcggtaaa tgcgagcgcc tgatgcgagg cagcaacacg gtcgtcacca tacccacacc
      541 gccgatccac agcaccacca tgaccagatg aacggcacgg gcgatcccga agtcggtcac
      601 gacgagcgct cctgacccgc gggagcaacg atcacaccag gcgggactgg tgcacggctg
      661 cggcaatgaa atgcgcaaat agcggatgcg ggtcgaacgg cttggatttc agttccgggt
      721 gatattgtac cccgacgaac caggggtggc ccggcagttc gacaatctcg ggcagcaccc
      781 catcgggaga catgccgcaa aagcgcaaac cggttgcctc cagacgctcg cggtaattca
      841 cattgacttc ataacgatgc cgatgccgct cctcgatgca gggttggtcg ccgtaaatcg
      901 agcggaccag actgccgggc tccagtaccg ccgggtacgc gccaagccgc atcgttccgc
      961 ctttgtcatc atgttcggaa cggtggacga tctgattgcc gcgggcccat tccgtcagca
     1021 gtccaaccac cggatcacgg cagggaccaa attcggtcga cgacgcgccc ggcatgtcgg
     1081 cgagattgcg tgccgcctcg atcaccgcca tttgcatgcc gaaacaaatt cccaggaacg
     1141 gaacccggcg ctccctggcg aagcggactg cttcgatctt gccctcggtg ccgcgttcgc
     1201 caaaaccggg cgccaccaga ataccgtgca catcctccaa tcgctgcact gcactgggct
     1261 tttcgaattc ctcgctgtcg acccagtcga tttgcacacg cacccggttg gcgatgccgc
     1321 cgtgtgccag cgcctcggcg agcgatttat agctgtcgag caaattggtg tatttgccga
     1381 cgatggcaat gcgaacgtcg ccttcggcgg tcgtcatggc gtcgacaatg ttccaccaac
     1441 ggctgaggtc gggggcgcca tcggccggca aatcgaaatg gcgtaagact tcgcgatcca
     1501 tgccctcttc gtggtagcgg atcggcaccc aataaatgtt cgggacatcc agcgccggga
     1561 tgaccgcctc tgcccggacg ttgcagaacg cggcgatctt acgccgttcc gcatcgggga
     1621 tcggccgatc gcagcggcac agcagcattt tcggctgaat accgacgttc agcagttctt
     1681 tcaccgaatg ctgggtcggc ttggttttca attcaccggc ggacgggatg taaggcacca
     1741 atgtcagatg cacgaacatg gagcgttccg gacccagatc gttaccgagt tgccggatgg
     1801 cttccagaaa tggcaggctc tcgatatcac cgacggtacc accgatttca atcagcacaa
     1861 attcgaattg atcggtgtcg cgctggatca cgtctttgat ggcgtcggtg atgtgcggaa
     1921 tgacctggac cgtggcgccg aggtaatcgc cacggcgttc gcgcaggatg acttcggagt
     1981 aaatcctccc cgtggtcgca ttgtcgagtt gcgtggcgtg cacgccggtg aaacgttcgt
     2041 aatggcccag atcgaggtcg gtttcggcgc cgtcgtcggt cacgaacacc tcgccgtgct
     2101 gggtcgggct catggtgccg ggatcgacat tcaggtacgg gtcgagcttg cgcagtttca
     2161 cgctgtaacc gcgcgcctgc aacagcgcgc caagcgccga cgcggcgata cccttaccca
     2221 gggaggaaac cacgccgccg gtgatgaaaa cgaaccgcgt catgggcggt ccttatacgt
     2281 gtgcgaatcg gggggtggga agccctggtc agtcgtcagt tgtcgggctt cagttttcag
     2341 ttggaggggg cggagggtgc cgctggtttg ggcggcgggg cggccggcaa cgtctgggcc
     2401 ggggccgtat cgaggattga ccggctggtt cccattgtgc cgcggttcaa cagggccagg
     2461 ctcagtgaca gggccatgaa ggctgtggcc aggattgcgg tggcgcgggt caacagattg
     2521 gccgtgcctc gcccgctcat gaacgagccc atgccctggg aggtgccaat cccgaggccg
     2581 ccgccttcgc tgcgctggat cagcacaacg ccgatcagcg ccagagtgac gaacaggtgg
     2641 atgataagca ggacggtgct caaaggacgg ttccgggtgc gagac
//
LOCUS       DATAVD010001223         1540 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2348305, whole genome shotgun sequence.
ACCESSION   DATAVD010001223 DATAVD010000000
VERSION     DATAVD010001223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2348305"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            105..>1540
                     /locus_tag="VHX39_23380"
     CDS             105..>1540
                     /locus_tag="VHX39_23380"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX3994126.1"
                     /translation="MSTLESKSVRRREDFRLLTGGGNYAADAQRTDMLHAILVRSPHA
                     HAQISGIDATAARGMPGVVAVYTADDLTDVKPIPGGINFPRPDGSPSAKTDRPLLVRD
                     RVRFVGEPIVLVLAESRAAGLEAAEAVTIDYSALPVVTDPMAAMASGAPPVWDEYPDN
                     IGYLWKRGDAEATAANLQAAAHVTKLEFSVSRVTANSMEPRGAWAEIGPDGRMVVHAS
                     NQSPFNLRNGMANGNFNIPPTDIRVIPGDVGGSFGMKSGVHQEVVLVAWAARKLNRAV
                     RWISERTEGFLTDEQAREMRIIAELGLDANNRFTALKLRWNANLGAYCSGRSGWPVGN
                     VGGIAGTYIIPAISAEVCGILTHTVPTAAYRGAGRPEATYAIERLIDVAARERGLTPY
                     ELRRINLIPPEAMPYKTALTFLYDCGEFEGNMTKAAELAELETFDARRSEAEGRGKLR
                     GIGLTNCIEVAGGPFLRPAKDLSTLRFA"
BASE COUNT          307 a          492 c          459 g          282 t
ORIGIN      
        1 gttctggcgg tatgataggg ctcggccata cgcgcgggat gccacgcctg gcaagaccag
       61 gtgccggttt ccgggcctcg tgcagacgtg aagggagagg ccaaatgagc actttggaat
      121 ccaaatcagt tcgccgccgt gaggattttc gtctgctgac cggaggcggc aactacgccg
      181 ccgatgctca acggactgat atgttacatg ccattttggt tcgctcgccc cacgcccatg
      241 cgcaaatctc cggcatcgac gccaccgccg cgcgcggcat gccaggggtt gttgcggtct
      301 ataccgccga tgacctgacc gacgtcaaac caatcccagg aggtatcaac ttccctcggc
      361 ccgatggcag cccctcggcg aaaaccgatc ggccattgct ggtccgcgat cgggtccgtt
      421 tcgttggtga accgatcgtg ctggtcctgg cggaaagccg cgctgcgggc ctcgaggctg
      481 ctgaggccgt aacgatcgat tacagcgcac ttcctgttgt caccgatccg atggcagcga
      541 tggcatccgg cgcgccgccg gtatgggacg aataccccga caacatcggc tatctttgga
      601 aacgcggcga tgccgaagcg acagcggcaa atctccaggc cgccgctcac gtaacgaaac
      661 tcgaattctc cgtctcccgc gttaccgcca actccatgga accccgcggc gcctgggctg
      721 aaatcggtcc cgacggccgt atggtcgtgc atgcatcgaa ccagtcgcca tttaatcttc
      781 gtaacggaat ggcgaacggc aatttcaata tcccgccgac cgatatccga gtgattcctg
      841 gcgacgtcgg cggctccttc ggcatgaaat cgggtgtgca tcaggaggtc gtcctggtcg
      901 catgggcggc ccgtaaactg aaccgggccg tgcggtggat cagcgaacgc accgaaggct
      961 ttctcaccga cgaacaggcg cgtgaaatgc gtatcatcgc cgaactcggc ctggatgcga
     1021 acaaccggtt cactgcgctg aaactgcgct ggaacgccaa cctgggtgcc tattgctcgg
     1081 gccgatccgg ctggccggtc ggcaatgtcg gcggcatcgc gggcacttac atcattccgg
     1141 caatttcggc cgaggtgtgc ggcattttga cccacaccgt gccgaccgcc gcctatcgtg
     1201 gcgccggtcg gcctgaggca acctatgcca tcgaacgcct gatcgacgtt gcagcgcgcg
     1261 aacgaggact gacgccctac gaactgcgcc ggatcaacct gattccgccc gaggcaatgc
     1321 catacaaaac cgctctgaca tttttgtatg actgcggcga gttcgaaggc aacatgacca
     1381 aagccgccga actggcggaa ctcgagactt tcgacgcaag gcgcagcgaa gctgaaggcc
     1441 gtggcaaact acgcggcatc ggcctgacca actgcatcga ggtcgccggc ggcccgttcc
     1501 tacgcccggc aaaggacctt tccacactca ggttcgccga
//
LOCUS       DATAVD010001224         4432 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1233828, whole genome shotgun sequence.
ACCESSION   DATAVD010001224 DATAVD010000000
VERSION     DATAVD010001224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4432
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1233828"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..393)
                     /locus_tag="VHX39_23385"
     CDS             complement(<1..393)
                     /locus_tag="VHX39_23385"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3994127.1"
                     /translation="MTGSSGVSRRTLLGAAVASPVVLRHALGDEPIKIGMPCALTGPG
                     GEVGEQMRRGAEFWIKSVNAKGGLLGRQIQLFAQDTGGDPATCVRKAQDAVERDGCRL
                     LFGMTLSSEALAVVPKLADWNAIFMSSDN"
     gene            complement(416..1051)
                     /locus_tag="VHX39_23390"
     CDS             complement(416..1051)
                     /locus_tag="VHX39_23390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3994128.1"
                     /translation="MKKAAVKKAGVKKKAAAPARKAAVKARAKTAAKKAAPKKAAPRK
                     VAAAKKSAARVPAARRTTTRRTRQAPPPRRKAAAPRLRAAAPAQHFTASHLNNADFKP
                     DGLRSYALYRDLGIAAASGGLCQAHVIRMLSPCTDEVRKRHQHDTELQLIYVLQGWIK
                     NEFEGEGVQMMSAGSCWLQPPGIKHTVLDYSADIELLEIIVPADFKTVELD"
     gene            complement(1185..2237)
                     /locus_tag="VHX39_23395"
     CDS             complement(1185..2237)
                     /locus_tag="VHX39_23395"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052689 - carboxylic ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HEX3994129.1"
                     /translation="MFAIVGCYTTPDRDGRGDGIRVYRVGSAGDQWTEIQHVEGLENP
                     SLFTLRRDQSVLYSVHGGRNLVSAFAVERDTARLTLLNQIDCQGNNPVDSALDPSERF
                     LVVGNYGSGTVSVIPLESDGRLMPVNQLVTLTGTPGPDPVQQTSSHPHAVIFDPSGNY
                     VVVPDKGLDKTFLFRFAFGRLVTTAQESVTSKPGAAPRHTVFHPSLPILYVNNELDST
                     VTVFDWNAGYAAEAQVISTIPQGNRGRNTTAEIAASPCGRFLYVSNRGEDSVVLFRIA
                     QDSGQLTYAGQTPTGGRRPRFFTLDPSGKRLYAANQDSDDIAGFRIDPDTGTLQPMGV
                     VARTGSPSAISFVDGP"
     gene            complement(2267..3010)
                     /locus_tag="VHX39_23400"
     CDS             complement(2267..3010)
                     /locus_tag="VHX39_23400"
                     /inference="COORDINATES: protein motif:HMM:NF014016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CbiX/SirB N-terminal domain-containing protein"
                     /protein_id="HEX3994130.1"
                     /translation="MFARDALLLIGHGSDRIPDAARPLLAHAEVVRESGRFGEVKVGM
                     LFGEPNVASVLATLTAPVVHVVPFFLNDGYFTRIVIPDLLMPLSSASRVVRFCRPVGS
                     HDDIATLIEDRLLRHCELYGTDSKSLSVLLVGHGSARSPGRARTLLRHATTLESRGRF
                     GWVRIAYLEEPPFVGKALASARGHVVAVIACLANEGIHATNDLPSLIAAERDERGTLW
                     PPVHDLGSIGANEAMPRLIMDQVMAARSI"
     gene            3075..4028
                     /locus_tag="VHX39_23405"
     CDS             3075..4028
                     /locus_tag="VHX39_23405"
                     /inference="COORDINATES: protein motif:HMM:NF006564.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase family protein"
                     /protein_id="HEX3994131.1"
                     /translation="MPAMASEFDRFAKFVATLGRGPGRSRALSREEAREAFGMVLRHK
                     ADPHQVGAFLMLLRFRGEDAGEISGMVEAARDTIGSQGAQTDLDWPSYGAGRTRGAPW
                     FLLSALALARAGTTVLMHGSNEYSAGISVEAGLQAVGPRVARFTYLPLASLLPAMNDL
                     LQMRRLFGLRSPVNTVARLLNPGDAPASVDGVFHPPYLAVHLGVAELLARKRLFVLKG
                     GGGEAERVPLKDASALLWDHTLGRSEVALPAWPGLSPLTPASDTPELLAAVWRGEIAP
                     PTAVATVIATIGLGLVALGWAVTAEAAERDAQQIWRDRLPT"
     gene            complement(4025..>4432)
                     /locus_tag="VHX39_23410"
     CDS             complement(4025..>4432)
                     /locus_tag="VHX39_23410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994132.1"
                     /translation="PKGWCGQDFNESADTPAQLAAAGFQYTTDWANDDRPYLLDGTLL
                     ALPPQPEWNDLECMWLRRVTPSVWRANIVEAFEVLHTEGGNVFNLTLHPWIAGQAHRI
                     RYLRDALHHVLGKPKIWRATTDDVAEVARPQLT"
BASE COUNT          835 a         1374 c         1352 g          871 t
ORIGIN      
        1 attgtcggac gacatgaaga tcgcattcca gtccgcgagt ttcggaacca ccgcaagtgc
       61 ctccgaactc agcgtcatcc cgaacaacaa ccggcaccca tctctttcca ccgcatcctg
      121 ggcttttcgc acacatgtgg cgggatcgcc gccggtatcc tgtgcgaaaa gctggatttg
      181 acggccgagc aacccgcctt tcgcgttgac ggatttgatc cagaactccg cgcctcggcg
      241 catctgttcg ccaacctcgc cgcccggccc ggtcaacgca cacggcatgc cgatcttgat
      301 cggctcgtcg cccagggcgt gacgcagtac aacgggcgac gccacggccg cgccaagtaa
      361 cgtgcggcgc gatacgccgg atgatccggt catcgggttt cctcccacag tttttttagt
      421 ccagttcgac cgtcttgaag tcggctggaa cgatgatttc gagcaactcg atatccgcgg
      481 aataatcgag aaccgtgtgc ttgatgcctg gcggttgcag ccagcacgag ccagccgaca
      541 tcatctgcac gccctcacct tcgaattcat tcttgatcca gccttgcagg acgtagatca
      601 actgcaattc ggtatcatgc tgatggcgct tgcgaacctc atcggtgcat ggcgacagca
      661 tacgaatgac gtgcgcctgg cacaagccac cgctggccgc ggcaattccc agatcgcgat
      721 acaacgcata ggaccgcaaa ccgtctggct tgaaatcggc gttgttgagg tggctggcag
      781 tgaagtgctg cgccggcgct gccgccctca gccggggtgc agcggcctta cgacgcggcg
      841 ggggcgcctg tcgggtccgg cgcgtcgtcg tgcggcgggc ggccggcacg cgggcggcag
      901 atttcttcgc tgcggccacc ttccttggcg ccgccttctt cggtgctgcc ttcttcgccg
      961 cagtctttgc gcgagccttc accgccgcct tacgcgccgg agcggcggcc ttcttcttca
     1021 ccccggcctt cttgaccgcg gccttcttca cgggggcctt tgccctcggt gcggctttcc
     1081 tggaagcggc cttcttcgcg gcagtttttt tgcggccgcg gacggtcctc gccatgtttg
     1141 tcccccaaaa cgcatgagcc aaagtcgaac gaatgatacg tcaatcaagg accgtcgaca
     1201 aaactgattg ccgaggggct accggtcctc gccacgacgc ccatgggctg caacgtccct
     1261 gtgtccggat cgatccggaa accggcaatg tcatcactgt cctgatttgc ggcatagagc
     1321 cgtttccctg acggatccaa tgtgaagaag cgcggccgcc gcccgccggt cggagtttgg
     1381 ccggcgtatg tcaactgacc gctgtcctga gcgatccgga acaagacaac gctgtcctca
     1441 ccgcggttcg atacgtaaag gaaccgtcca cacgggctcg cagcgatctc cgctgtggtg
     1501 ttgcggccgc gattgccttg cgggatcgtg ctgatcacct gggcctctgc agcatagccc
     1561 gcgttccagt cgaacacggt tacggtcgag tcgagctcgt tgttcacata cagaatcggc
     1621 aacgacggat ggaacaccgt atgccgaggc gcggcaccag gtttcgacgt aaccgattcc
     1681 tgtgcggtgg tgaccagccg tccgaatgca aagcggaaca agaacgtctt gtcgaggcct
     1741 ttgtccggaa ccacgacgta gttgccggac ggatcgaaaa tgaccgcgtg cggatgcgac
     1801 gatgtctgct gcacggggtc gggtcccggc gttccggtca aggtgacaag ctgattgacc
     1861 ggcataagtc ggccatccga ttccagcggt atcaccgaga ccgtaccgct gccgtaattt
     1921 ccgacaacca ggaaccgctc ggatggatca agcgcagagt caaccggatt gttgccctgg
     1981 caatcaattt gattgagcaa tgtcaaccgg gctgtgtcgc gttccaccgc aaacgcactg
     2041 accaaattgc ggccgccgtg cacggaatac aacaccgatt ggtctcgtcg cagggtgaac
     2101 agcgagggat tttccaaccc ttcgacgtgc tggatttcgg tccattggtc gccggcgctg
     2161 ccgacacggt atacccggat cccatcaccc cgcccgtcgc gatccggcgt tgtatagcat
     2221 cccacaatgg cgaacatcgg cttcctccct tcctcgccgg agcgaattat atggaccgcg
     2281 cggccataac ctggtccatg atcagccgcg gcattgcctc atttgcgccg atcgacccca
     2341 ggtcgtggac cggcggccaa agtgttcccc gttcatcgcg ttcggcagcg atcaaactcg
     2401 gcaggtcatt ggttgcatgt atgccctcgt tggccagaca cgcaatgacc gcaaccacat
     2461 ggcctcgagc gctggccaga gccttaccga caaacggcgg ctcctcaaga taggcgatgc
     2521 gaacccagcc gaaccgcccc ctcgattcca gcgtggtcgc atgtcgcagc aaggtgcgcg
     2581 cgcgcccagg actccgggcg gaaccatggc cgaccagcag tactgagagg gattttgaat
     2641 cggtgccgta caattcgcaa tggcgcagca gacggtcctc gatcaatgtc gcaatgtcgt
     2701 catgcgaacc gaccggccgg caaaaccgaa cgacccgcga cgcggatgaa agtggcataa
     2761 gcagatcagg aatgacaatc ctggtgaaat aaccgtcatt gaggaaaaat ggcacgacgt
     2821 ggaccaccgg cgcggtgaga gtagcgagga ccgaagcaac atttggttcg ccgaacagca
     2881 tgccaacctt gacctcgccg aagcggccgg attcgcgaac gacctcggca tgagccagga
     2941 ggggacgtgc agcgtccggt atacggtcag agccatgccc gatcagcaac agcgcgtcac
     3001 gtgcgaacac cggtgcctcc tcgccccgac cacattgcgg caaagcggtt gccaggacaa
     3061 cctccgagga ctacatgccc gcgatggcct cggaattcga taggttcgcg aagtttgttg
     3121 ccactctggg tcgcggccca ggacggtctc gtgcactgag cagggaggaa gcgcgcgagg
     3181 cgtttggcat ggtgttgcgg cacaaggcgg acccgcacca ggtcggcgca ttccttatgt
     3241 tgttgcgttt ccgtggcgaa gatgccggcg agatcagcgg catggttgag gcagcacggg
     3301 ataccatcgg ctcgcagggg gcgcagaccg atctcgactg gccatcgtac ggcgcgggcc
     3361 gcacccgagg cgcaccctgg ttcctgcttt ctgcgctcgc attggcccgt gccggaacga
     3421 ctgtgttgat gcacggttca aacgaatatt ccgcagggat atcggtcgaa gccggacttc
     3481 aggcggtcgg acctcgtgtt gcccggttca cctatctgcc gctggcttcg ctgttgccgg
     3541 cgatgaacga tttgttgcaa atgcgccggt tatttggctt gcggtcgccg gtcaataccg
     3601 tcgcgcgctt gctcaatccc ggcgatgcgc cggccagtgt cgatggggtt tttcacccgc
     3661 cttatctcgc agttcatctg ggcgtggctg aactgctggc acgcaagcgg ctgttcgtgt
     3721 tgaaaggcgg tggcggcgag gcggaacggg tgccgttgaa ggacgcctcc gccctgttat
     3781 gggatcacac cttgggccgg tcagaggtcg cattgccggc atggcccggc ctgtccccgt
     3841 tgactccggc gtccgatacg ccagagctgt tagcggcggt ttggcgaggc gaaatcgcgc
     3901 caccgactgc agtcgcgacc gtcatcgcga cgattggatt aggattggtc gcgctggggt
     3961 gggctgtcac cgcggaagcc gccgaacggg atgcgcaaca aatttggcgg gatcggttgc
     4021 cgacttaagt caattgcggg cgagccacct cggctacgtc atcggttgtc gcacgccaga
     4081 tcttcggctt acccagaacg tggtggagcg catcgcgaag atagcgaatg cggtgtgcct
     4141 ggccggcgat ccaggggtgt agcgttaaat tgaaaacgtt gccgccttcc gtgtgcagca
     4201 cctcgaatgc ttcgacgata tttgcccgcc aaaccgaggg tgtcacgcgg cgcagccaca
     4261 tgcattcaag gtcgttccat tccggctgcg gcggcaatgc caggagagtg ccatcaagca
     4321 ggtacggccg gtcgtcgttc gcccaatcgg tggtgtattg aaacccggcc gcggcaagtt
     4381 gtgccggcgt gtccgcggat tcattgaaat cctgtccaca ccaacctttt gg
//
LOCUS       DATAVD010001225         3267 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2164131, whole genome shotgun sequence.
ACCESSION   DATAVD010001225 DATAVD010000000
VERSION     DATAVD010001225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3267
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2164131"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..775)
                     /locus_tag="VHX39_23415"
     CDS             complement(<1..775)
                     /locus_tag="VHX39_23415"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX3994133.1"
                     /translation="MMPLQVEVWDAAGQGILVCPAEECGSRYPVIDGLPVLVPDLPRY
                     LAEVGVYLLARDDLSAPVADLLGSVTPPGAWFDAARLHLSGYVRDHWGAFDTSDHEAP
                     APGQAWALAKAGLALIGPVAGPVIELGAAAGGVTRALAERLEMPVLGLDLSAPVMRFA
                     ARALRGGTLRYPLRLSGTAYAEREIVVPPPERGEASVWLADALVPPVAEGSAGLVVAL
                     NLLDCVTDPAALMRAAAGLLRPGGHLLLCTPRDWSTSATP"
     gene            complement(842..1231)
                     /locus_tag="VHX39_23420"
     CDS             complement(842..1231)
                     /locus_tag="VHX39_23420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAAR domain-containing protein"
                     /protein_id="HEX3994134.1"
                     /translation="MSPPAARLTDQVLQMAPHCHAPIHPPAPVPTPVPHPALPLPLVS
                     PGVPTVLIGSLPASVLGDMTMPCMLPGCVPAGPGMVMMGSTTVLVGSKPVARVGDQTL
                     HSSCVAPIPSPMGQILPPGCPTVIIGG"
     gene            1525..2562
                     /gene="hemE"
                     /locus_tag="VHX39_23425"
     CDS             1525..2562
                     /gene="hemE"
                     /locus_tag="VHX39_23425"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006557811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEX3994135.1"
                     /translation="MTKTLLRALRGEAVWPPPVWLMRQAGRYLPEYRAVRASVPDFIA
                     LCTTPALAAEVTLQPIRRFGFDAAILFSDILILPWALGQGLEYRDGEGPVLPPIRDEA
                     TFRLLDPARLAEKTAPVMEAIRQVRAGLTREGFGATALIGFAGAPFTVACYMVEGAGS
                     RDFAATRTLAWQNPSLFDRIIDLLTETTVTYLAAQVEAGAEVIMVFDTWAGVLAPSQF
                     RRYVIEPARRIVAALREQFPDLPVIGFPRMAGLSVAAYAHETGVNAVGLDTATDLNQV
                     LPLLPHSVAAQGNLDPLALVAGGAAMTQETAAILAAMRGRPGIFNLGHGIVPQTPPEH
                     VTALLELVRAS"
     gene            2552..>3267
                     /gene="hemH"
                     /locus_tag="VHX39_23430"
     CDS             2552..>3267
                     /gene="hemH"
                     /locus_tag="VHX39_23430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEX3994136.1"
                     /translation="MPPKVAIVLFNLGGPDSPEAIRPFLLNLFNDPAILRVPFFVRPF
                     LARKIAAARLQPATAAYRLLGGKSPLQEMTEAQAKAIEAALPELDAKCFIAMRYWHPF
                     SLAAARAVKTWQPDEIVLLPLYPQYSTTTTGSSLTAWREAAARVGLVAPTAAVCCFPT
                     DPAFIDATLSIVRTAYEAARAALDPSVPLRILFSAHGLPEAIIRAGDPYQYQIERAVA
                     ALLAAWRRNDLDWKICYQSRA"
BASE COUNT          533 a         1071 c         1078 g          585 t
ORIGIN      
        1 ccggtgttgc cgaggtgctc cagtcgcgcg gcgtgcacaa caacaggtgc ccaccgggcc
       61 gcagcaggcc ggcggcggcg cgcatcaggg cggccgggtc tgtcacgcag tccagcaggt
      121 tcagcgcaac cacgaggccc gcgctgccct cggccaccgg tggcaccagc gcgtcggcca
      181 gccaaaccga ggcctcgcca cgttccggcg gcggcacgac gatctcccgt tcggcgtagg
      241 cggtgccgga cagtcgcaac ggatagcgca gcgtcccacc gcgcaacgca cgcgcggcaa
      301 accgcatcac cggcgccgac aggtccaatc cgagcacggg catttccagc cgctctgcca
      361 atgcgcgggt cacccctcca gcggcggcgc cgagttcgat caccggaccc gcgaccgggc
      421 cgatcaatgc cagacccgcc ttggccaacg cccaggcctg accgggggca ggggcttcgt
      481 ggtcggaagt gtcaaaggcg ccccagtggt cgcggacata gccggacaag tgcaatcttg
      541 cggcgtcgaa ccaggccccg ggtggcgtca ccgaacccaa caggtcggcg accggcgctg
      601 aaaggtcgtc gcgtgccagc agatagactc cgacctcggc caggtagcgt ggcagatccg
      661 gtaccaggac aggcaaccca tcgattaccg gatagcgtga gccgcattcc tcagcgggac
      721 agaccaggat gccctgaccg gctgcgtccc atacctcgac ctgcagcggc atcatggcgc
      781 cccgcgcgcg gcatgcggtg cagagcggtg cgaagtggcg gaacgccggc ggcaccaggc
      841 ctcagccgcc gatgatcacg gtcgggcagc cgggtggcag gatttggccc atcgggctgg
      901 ggattggcgc gacacaggag gagtggagcg tctggtcgcc cactcgcgcg accggtttgc
      961 tgcccaccag cacggttgtg ctgcccatca tgaccatgcc tgggccggcc ggaacgcagc
     1021 cgggcagcat gcagggcatt gtcatgtcac ccaggaccga agccggcaga cttccgatca
     1081 aaaccgtcgg aactccgggc gagaccagcg gaagcggcaa cgccgggtgc ggtaccgggg
     1141 ttggcacagg ggccggaggg tgaatcggcg catggcaatg cggcgccatt tgcagcacct
     1201 ggtcagtcag gcgggcggcc ggcgggctca tgcgcgaccg cgcctgggct gggccggggg
     1261 atgccagttg gtaagcaccg catcatgtat tgttggtggt ttcattggtc cgagatctgt
     1321 cccaccgacc gaggttaagc gaatcgcagc ctaggcggca cggttcgcat tgtgaagcga
     1381 ttattaccgc gcgaggcgaa tcgcggcccc ccgcgtgatt gtttccggcc tctcgggtcc
     1441 gtgttacggt cgcgcatggc cgatgcgtcc cactctatga tcgctgccgc caggaccacg
     1501 catgaaagtc gtcggtgacc tgacatgacc aagaccctgc ttcgcgcatt gcgtggcgaa
     1561 gccgtgtggc caccgccggt gtggctcatg cggcaggccg gccgctattt gccggagtat
     1621 cgcgccgttc gcgcgtccgt ccccgatttc attgccctct gcaccacgcc ggccctggcg
     1681 gccgaggtta cgctgcaacc gatccgccgc tttggtttcg atgccgcgat cctgttcagc
     1741 gacatcctca tcctgccctg ggctttgggc cagggcctgg aataccggga cggcgaaggt
     1801 ccggtgctgc cgccgatccg tgacgaggca acgttccgcc tgctcgatcc cgcccgtttg
     1861 gccgagaaga ccgcaccggt gatggaagcg atccgccagg tccgggccgg cctgacgcgc
     1921 gaggggttcg gcgccaccgc actgatcggt tttgccggcg caccgtttac ggtcgcctgt
     1981 tatatggtcg aaggcgccgg ctcccgcgac ttcgccgcga cgcgaaccct ggcctggcag
     2041 aatccatcgt tattcgaccg catcattgat ctattgacag aaacgaccgt gacctatttg
     2101 gcagcccagg ttgaggcggg tgcggaagtt attatggtgt tcgatacgtg ggctggcgtg
     2161 ttggcgccgt cccagtttcg ccgctatgtc atcgaaccgg cgcgccgaat cgttgccgca
     2221 ttacgcgagc aatttcccga tctcccggtg atcgggtttc ctcgtatggc gggtttgtcg
     2281 gttgcagctt acgcacacga aacgggtgtg aacgcggttg gtctggatac cgccacggac
     2341 ctgaatcagg ttctgccgtt gctgccgcat tccgttgccg cgcagggcaa tctcgaccca
     2401 ctggccttgg ttgcaggggg cgccgcgatg acccaggaga ccgccgcaat tctggcggcg
     2461 atgcgtggcc ggcccgggat cttcaatctg gggcacggca tcgttccaca aaccccgccg
     2521 gagcacgtca cggcactgct cgagttggtt cgtgcctcct aaagtcgcga tcgttctgtt
     2581 caatcttggc ggacctgata gcccggaagc gatccgtccc tttctgctga acctgttcaa
     2641 cgacccggcc attttgcgcg tgccgttctt tgtccggccg ttcctggccc ggaagatcgc
     2701 cgccgcacgt ttgcaaccgg cgactgcggc gtaccggctg cttggcggca aatcgccgtt
     2761 gcaggaaatg accgaggcgc aggcgaaagc aatcgaagcc gctttgccgg aactggatgc
     2821 caaatgcttc atcgccatgc gttactggca tccgttcagc ctggccgccg cgcgagcggt
     2881 caagacctgg caaccggatg agatcgtgtt gctgccgcta tatccacaat attccacgac
     2941 cacgacgggc agttcgctga ccgcctggcg ggaggcagcg gctcgggttg gtctggtggc
     3001 gccgaccgct gcggtctgtt gtttcccgac cgatccggcc ttcatcgatg caacgctgtc
     3061 gatcgtgcgg actgcgtatg aggcggcgcg cgcggcgctc gatccttcgg ttccgctgcg
     3121 catcttattt tccgcgcatg gcctgccgga ggcgattatc cgtgccggcg atccgtatca
     3181 atatcagatc gaacgggccg tcgcggcatt gctggctgcg tggcggcgca acgatctcga
     3241 ctggaagatc tgctaccagt cgcgtgc
//
LOCUS       DATAVD010001226        10286 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3655315, whole genome shotgun sequence.
ACCESSION   DATAVD010001226 DATAVD010000000
VERSION     DATAVD010001226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10286
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3655315"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1861)
                     /gene="glgP"
                     /locus_tag="VHX39_23435"
     CDS             complement(<1..1861)
                     /gene="glgP"
                     /locus_tag="VHX39_23435"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HEX3994137.1"
                     /translation="MIPWRELPAPLAALRDLALDLRWTWSHEADALWARIDNEFWQRW
                     GNPWTILDNVSAARLDELAADPDFVSHLYQLVLARRAYLTDQSWFADTTAGTPLKGIA
                     YFSMEFGLGSALPLYAGGLGVLAGDFLKAASDQGIPVIGIGLLYQEGYFHQMIDAEGR
                     QLEAFPYNDPSSMPVEPARTAEGAWLHIPVELPGRTLQLRAWRVIIGRMLLYLLDTND
                     PVNGPIDRGIAGKLYGGSNEMRLMQELVLGVGGWRLAEALHPEITICHLNEGHAGFAI
                     LERARRFSQKNALSFNEALWATRAGNVFTTHTPVEVGFDRFPMTLFARYAQAWAGETV
                     ALGDVLALGQEDGRTSDGVFNMAWLAARGALLSFGVSRLHGSVSRQIFQPLYPRWPES
                     EVPFDHVTNGVHVPTWDSAMADAIWTETCGKDRWRRHPEDMGQRIQTVEHEALWSMRG
                     KAREALVGEVRARLTFQLRGRGHPADVVAIGERVLDPNVLTLGFARRFTDYKRTDLLL
                     FDRARFTRMLCDEARPVQLVLAGKAHPDDAAGKRMVQEWIECAQDPKLRTRLVFLEDY
                     DITLAQQLVQGVDVWINTPRRPWEACGTSGMKVLVNGGLNLSTLDGWWEEAYAP"
     gene            complement(2076..3275)
                     /locus_tag="VHX39_23440"
     CDS             complement(2076..3275)
                     /locus_tag="VHX39_23440"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3994138.1"
                     /translation="MDVAPVSPGCLSGIRVLDLTQFEAGTTCTEALAWMGADIAKVEN
                     PNGGEAGRTGFGDAYYFMMYNANKRSITVNLKSERGLALVKDMVKRADVFTENFAPGA
                     VERLGLGYDVVSAINPRIIYAQVKGFGDGSPYEKGLAFDPVAQAAGGSMSITGERDGR
                     PIKPGPTIGDTGTGMLLAFSIVSALFERTRTGKGRRLQVAMQDSVMHYSRGMFITQAR
                     TGAAAPRRPPANNPPGGIYPCQPGGPNDYVYLLTSRANPEHWPRLLKLIGREELIGNP
                     RYDTPDARLKCEAEVDEIVSAWTRQRTKHEAMTQLSAVGVPAGAVMDSMELTNEPSLH
                     KRGILQTMTHGERKMTMPTWPVRFDGVPAEVKSAPLLGEHTAEVLADWLGLDAAAVDG
                     LHRDGVV"
     gene            complement(3351..3833)
                     /locus_tag="VHX39_23445"
     CDS             complement(3351..3833)
                     /locus_tag="VHX39_23445"
                     /inference="COORDINATES: protein motif:HMM:NF018717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEX3994139.1"
                     /translation="MPDNQVIGDTEGAVQWLRAQPWRNGKVGVIGSCSGGRQTFLLGA
                     GATNILRAQSVKKPAYFVADVAVTDMPAFQAYAAKVPETLKPYNARVIVRARPDAKEG
                     AAPQGNIVVLAFDSLADAEKWYSTPPYSELIPLRQKSATTQQLYIVEGLPQLFRHLRA
                     "
     gene            complement(3815..4102)
                     /locus_tag="VHX39_23450"
     CDS             complement(3815..4102)
                     /locus_tag="VHX39_23450"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX3994140.1"
                     /translation="MAYEGMIAETISITGDKGTPISAYVARPLGAGPFPGIVLIHHAP
                     GWDEWYREATRKLAHHGYAAISHNLYHRAGEGKADDVAAKVRAEGGCRTIR"
     gene            4192..4728
                     /locus_tag="VHX39_23455"
     CDS             4192..4728
                     /locus_tag="VHX39_23455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HEX3994141.1"
                     /translation="MSVYFTSDHHFGHSGARSLYRRPFASVADMDRQMIVRWNSVVEP
                     QDEVWHLGDFAVHQTRDRVGSLLNDLHGQKHLIAGNNDDAAVTDCAGWKSVQSYAEVT
                     VDEARLVLCHYPFRTWRDMGRGSINLHGHSHGRLKPQPRQFDVGVDAWDFRPVQLVEL
                     VDKARARRPVRAATASAG"
     gene            complement(4739..6202)
                     /gene="glgA"
                     /locus_tag="VHX39_23460"
     CDS             complement(4739..6202)
                     /gene="glgA"
                     /locus_tag="VHX39_23460"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: protein motif:HMM:NF001899.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HEX3994142.1"
                     /translation="MFVCAEFYPLAKTGGLADVCAALPRALAQEGTDARVMLPAYPSV
                     LDSVDEAREVLRLPDGGRVLLTRVQDNPLPIYLYDQPDLFRRPGGPYQDPERHDWPDN
                     HLRYSAFCRSATALALYGDALGWAPNVVHAHDWHAALVPALLALHDGPRPPVVLTIHN
                     LAYQGNFPLGAAAEAELPAALLGTGVAEFYGQLSFLKAGICTADRLTTVSPTYAREIL
                     TPEHGAGLDGVLRTRAADLVGIMNGVDADVWNPASDPYLASHYTARDLSGKLACKAAV
                     QEELGLEPSPEAPLICFVNRLTHQKMAETVLELLPAMADRGIQFVLHGQGDADLENAF
                     AAQTGRSPQVVLRVGYQEDLAHRLTAGADISLIPSRFEPCGLTALYAMRYGALPVSRS
                     VGGLADSVVDAGDATEPSGDATGFRFAEDGASGLLAGLDRARARFARRDSWQRMQRTA
                     MGRDFSWHTAARHYLALYDELVPGIGFDTATQGRDAA"
     gene            complement(6668..7303)
                     /locus_tag="VHX39_23465"
     CDS             complement(6668..7303)
                     /locus_tag="VHX39_23465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994143.1"
                     /translation="MKVWLLVGAVASVLVAVLYHSVAQARVIGSDWKFYGGVSSPNGQ
                     TWCFYDARSIAREPTGLMQMAAKCLPQAAMDDVDIATDFGGAIARNVARKRRGHYMPP
                     YAMAETLDRAQAIDITRLEEIADIADVEPRAKVTYELDCTKHMARQLTVYVNVNGKVR
                     NVDKPGDWKAISPRENTIRLSKILCRPRSDSTPRVSSRPEAAPAAADSNTK"
     gene            7529..8209
                     /locus_tag="VHX39_23470"
     CDS             7529..8209
                     /locus_tag="VHX39_23470"
                     /inference="COORDINATES: protein motif:HMM:NF042734.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HEX3994144.1"
                     /translation="MSAQQITIEVNEDETVSGLLLVPTCPVACCVLAHGAGAGMTHPF
                     MTAVAEGLHSRRMATLRYQFPYIEHGSKRPDRPPLAHATVRAAVATATRLAPEVPLIA
                     GGKSFGARMTSQAQAQLPIPNVVGLVFLGFPLHPAGKPSDDRAAHLSEVRVPMLFLQG
                     TRDTLADSRLLGTVLDRLSPGATSRLFEGADHSFHVPKRSGTTDRQVLDGVLDALVAW
                     ALSICGPH"
     gene            8229..9470
                     /locus_tag="VHX39_23475"
     CDS             8229..9470
                     /locus_tag="VHX39_23475"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX3994145.1"
                     /translation="MTDAPYHGLAPARTATRSIPRSGEDVAGSDLIRTMNPAKIQYLE
                     GLRGIAAVQVVLLHFVTGFLPNTAEHAVPPLKIMWDGHTAVYVFFLISGAVLTPSFAR
                     GGRWPRQSIKRLVRLGLPIVVAAVIAFALLITMPDAHLVAARLTGSGWLAMDSTAATT
                     LTHLLREITLDSLTLGYREYTLFTPIAGRLPLLENALNAPSWSLHLELYGSMLVLGLV
                     LLRARAPRVHFAAVAMCAILFGTHPMFLFVLGHICANQLRKPPRPVIGASLIILGLAM
                     SATKDWTVLETVRMAIARFAPAAAPNLFQFQSQMAAVALFIGVLLTPVAQRLLSLCGR
                     LGRLSFSIYLLHFPILFTVACAGFIPLASRFPEPVAVAITFIGFAVIVWLAAEGFERL
                     VDRPSVLLSRRIDPRQQLAPA"
     gene            9522..>10286
                     /locus_tag="VHX39_23480"
     CDS             9522..>10286
                     /locus_tag="VHX39_23480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994146.1"
                     /translation="MTRPFAKTQGPHLTVAHAAWWIALAVLSVALLAPLLITDVPPVL
                     DYPNHLARLVLLAAGRHDKVLGPIFEPNWTIIPNLAGDAIGLMLLHVLPVYTAGRCLL
                     GGVLLLNLAGVVALHRAYFGRRSFWPLGSALVAYNATFLLGFLNWQISSGLAMLFAAG
                     WLTWRELRPFTTLAAAMAASVLLFFCHLMGVVFFLVLIGSAELRAMRDLRAVLVRGAG
                     LLAVLAGPIALAILAEVHNAPAALSWPRVDVKLVNAA"
BASE COUNT         1915 a         3245 c         3045 g         2081 t
ORIGIN      
        1 cgggtgcgta agcctcctcc caccagccat ccaatgtcga cagattgagg ccgccgttga
       61 ccagcacctt catgccgctg gtaccgcaag cctcccacgg gcggcgcggc gtattgatcc
      121 agacgtcaac gccctggacc aattgctgcg ccaatgtaat gtcgtagtcc tcgaggaaca
      181 ccaaccgtgt gcgtaacttc gggtcctgcg cgcattcgat ccattcctga accattcgct
      241 tgccggccgc atcgtccggg tgggctttgc cggccagcac gagttgcacc ggacgcgcct
      301 catcgcacaa catccgcgta aagcgggcgc gatcgaacag cagtaaatcg gtgcgcttat
      361 agtcagtgaa tcggcgagca aagccgagcg tcaacacgtt gggatcaagc accctctcgc
      421 cgatcgcgac gacatccgcc gggtgcccgc gcccacgcaa ctgaaacgtc aatcgcgcac
      481 gcacctcgcc gacaagcgct tcgcgcgcct taccacgcat agaccagagc gcttcgtgtt
      541 ccacggtttg gatgcgttgc cccatgtcct cgggatggcg acgccagcga tccttgccgc
      601 aggtttcggt ccagatcgca tcggccatgg cggaatccca ggtcggcaca tgcacaccat
      661 tcgttacgtg atcgaacggg acctcactct ccggccaacg aggataaagt ggttggaaaa
      721 tctgccggga gaccgaacca tgcagccggc tgacgccgaa gctcagcagc gcgccgcggg
      781 ccgccagcca ggccatattg aaaacgccat cagaagtgcg gccatcttcc tgacccagtg
      841 ccagaacatc gcccaacgca acagtttcgc cagcccaggc ctgggcgtat cgcgcaaaca
      901 gggtcatcgg gaaacgatcg aacccgacct ccactggggt gtgcgtggtg aagacgttgc
      961 ccgcgcgggt ggcccacagc gcctcgttga aactcagcgc gtttttttgc gagaaccggc
     1021 gcgctcgctc cagaatggca aagccggcgt gtccctcatt caggtgacat atcgtgattt
     1081 ccggatgcag cgcctcggcc agccgccagc cgccgacgcc cagtacgagt tcctgcatca
     1141 gccgcatctc gttgctgccg ccgtacaatt tgccagcgat gccacgatcg atcggaccgt
     1201 tcaccggatc gttggtatcg agcaaataca gcaacatccg tccgataatg acacgccatg
     1261 cgcgcaactg cagagtgcgg ccgggtagtt caaccggaat gtgcagccag gcgccttcgg
     1321 ccgtgcgagc cggctcgacc ggcatgctgg atggatcgtt gtacggaaac gcctccaact
     1381 ggcgcccctc cgcgtcgatc atctggtgga agtagccttc ctgatacaac agtccgatac
     1441 cgatgaccgg gataccttga tcgctcgccg ctttcagaaa atcaccggcc agaacgccga
     1501 ggccgccggc gtagagcggc agagcgctgc cgagaccgaa ctccatactg aaataggcaa
     1561 tgcccttcag cggggtgccg gccgtggtat cggcgaacca gctttggtcg gtcaaatagg
     1621 cgcgcctcgc caggacaagt tgataaagat gcgagacgaa gtcgggatcg gcggcgagtt
     1681 catccagccg ggccgctgaa acgttgtcaa gaattgtcca tgggttgccc caacgctgcc
     1741 agaactcgtt gtctatccgt gcccaaagtg cgtcggcctc atggctccag gtccagcgca
     1801 gatccagcgc cagatcacgc aatgcagcca gcggtgccgg aagttcccgc caggggatca
     1861 tgtcgaacgt cggttggatt gcacgagaag tttgaaccct ttcccacgtc agggccctac
     1921 gcccgtcatt ggcgctatcc cgaccacgcc ggcatcacgc caatgttgcg gcccggagtg
     1981 cagcgggcgc aagcccaacg cgatgacgtt tttatggacg tcggaaccgg cgttccggcg
     2041 tgccggtctt ggttcagtac ccggctacat tcgcctcaga cgacaccgtc cctgtgcaat
     2101 ccgtcgacgg cggccgcatc gagaccgagc caatctgcca acacttcggc agtgtgttcg
     2161 cccaacaacg gcgctgactt cacttcggcc ggcactccat cgaaacgcac cggccaggta
     2221 ggcatcgtca tctttcgttc gccgtgcgtc atggtttgca ggatgccacg cttgtggaga
     2281 ctgggctcgt tggtcaattc cattgagtcc ataacggcac cggcagggac accaaccgca
     2341 ctcagctgcg tcatcgcctc gtgcttcgtg cgctgccgcg tccacgcaga gacgatttcg
     2401 tcaacctcgg cctcgcactt caggcgagca tcgggtgtgt cgtagcgcgg attgccaatc
     2461 agctcctcgc gcccaatcag tttcagcagc cgaggccaat gctcggggtt ggcgcggctg
     2521 gtcagcaggt agacgtaatc gttgggacca cctggctggc aaggatagat gccgccgggc
     2581 ggattattgg caggcggacg gcgaggagcg gcggcgccgg tgcgagcctg ggtaatgaac
     2641 atgccgcggc tgtaatgcat aaccgaatcc tgcattgcca cctgcagtcg tcgaccctta
     2701 cccgtgcgcg tgcgttcgaa cagggcgctc acgatgctga acgccaacag catgccagtg
     2761 ccggtgtcgc cgatcgtggg accaggttta atcggcctac catcacgctc gccggtgatg
     2821 ctcatcgagc cgcccgccgc ctgggcgacc ggatcgaacg cgaggccctt ctcatacggg
     2881 ctgccgtccc caaagccctt gacctgggca tagatgatcc tgggattgat tgcacttacg
     2941 acatcgtagc ccaggcccag acgttcgacc gcgccagggg cgaaattctc ggtgaagacg
     3001 tcggcccgtt taaccatgtc cttgaccagc gccagaccgc gctcggactt caggttgacc
     3061 gtgatggagc gtttgttggc gttgtacatc ataaagtagt acgcgtcgcc aaagccggtg
     3121 cggccggctt caccgccatt cgggttctcc accttggcga tatcggcgcc catccaggcg
     3181 agcgcctcgg tgcaggtcgt cccagcctcg aattgcgtca ggtcgaggac gcgaatgccg
     3241 gagagacagc cgggggaaac gggagctacg tccattggga gcctcctctt atcagccggg
     3301 aagttgtcag ccccaacagc gtcaggtgtc aatcggcgtg cgtgtgacgt tcacgcccgc
     3361 aagtgcctaa acaactgggg caaaccctca acgatataaa gttgctgcgt tgttgccgac
     3421 ttctgccgca gcgggatcag ctcgctgtaa ggcggcgtgc tgtaccactt ctccgcatcc
     3481 gccaggctat caaaggcgag aacgacgatg ttgccctgag gagccgcgcc ttccttggca
     3541 tcaggcctgg cgcggacgat aacccgcgca ttatatggtt tcagcgtttc cggcactttt
     3601 gcggcgtagg cctgaaaggc gggcatgtct gtcactgcga cgtcggcgac gaagtaggca
     3661 ggcttcttaa cgctctgggc ccgcaatatg ttcgttgcac ccgcgccaag gaggaacgtt
     3721 tgccgcccgc ccgagcagga acctatcacg ccgaccttgc cattgcgcca gggttgtgca
     3781 cgcagccatt gcacggcgcc ttcggtatcg ccgatcacct gattgtccgg cacccgcctt
     3841 cggcgcgcac tttggcggca acatcgtcgg ctttgccctc gcccgcgcga tgatagagat
     3901 tgtgactgat cgccgcataa ccgtgatggg caagtttccg ggtcgcttcg cgataccact
     3961 catcccaacc aggcgcgtga tggatcagta cgatgcccgg gaatgggccc gcacccaacg
     4021 gccgtgcaac ataggccgaa atcggggtac ctttgtcgcc agtgatcgaa atcgtttccg
     4081 cgatcattcc ttcataggcc attttttctc tccctgccga tgcaaacccg tccggcccga
     4141 attacgatat gagccgttgc gcggcaatca agccacgccc agagcaaggc catgtccgtc
     4201 tacttcacca gcgatcacca cttcggtcat tccggtgcgc gcagcctgta ccgccgcccg
     4261 tttgcctcag ttgctgacat ggatcggcaa atgattgtcc gctggaattc agtggtcgaa
     4321 ccgcaggatg aggtctggca tctaggcgac ttcgcggttc accaaacgcg ggatcgagtg
     4381 ggttccctgc tgaacgatct gcatggccag aagcatctga tcgccggcaa caacgacgat
     4441 gccgctgtca ccgattgcgc cggatggaag agtgttcagt catatgcgga agtgacggtc
     4501 gacgaagcga ggctcgttct gtgccactac ccgttccgga cctggcgaga tatgggcaga
     4561 ggctcgatta acctccatgg ccacagccat ggcaggctga agccgcagcc gcgccaattc
     4621 gatgttggtg tggatgcgtg ggatttccgg ccggtccagc ttgttgaact ggtcgacaag
     4681 gcccgggctc gccgccccgt acgagccgca acagcttccg cagggtaatc gcagtcagtt
     4741 acgcggcatc gcgcccttgt gtcgccgtgt cgaagccgat gcctggcacc aattcgtcgt
     4801 acagcgccaa atagtgccgc gccgccgtgt gccagctaaa atcacgcccc atcgcggttc
     4861 gctgcatacg ctgccacgag tcccgacgag cgaaccgcgc gcgcgcacga tccaggccag
     4921 cgagtagccc cgatgcacca tcctcggcaa atctgaagcc cgtcgcgtca ccactgggct
     4981 ccgtcgcatc accggcatcc acgacgctgt cggcaagacc gccaaccgag cggctgacag
     5041 gcaatgcacc gtaacgcatc gcatagaggg cggtcaggcc acacggctca aaccgcgatg
     5101 ggatcagcga gatatccgcg cccgccgtca atctgtgtgc aaggtcctct tgatagccca
     5161 cccggaggac gacctggggc gaccggccgg tctgggctgc gaaagcattt tccaggtccg
     5221 cgtcaccttg accatgcaga acgaattgga tgccgcggtc cgccatcgcc ggcagcagtt
     5281 ccagcaccgt ctcggccatc ttctgatggg tcagccggtt gacgaaacat atcagaggcg
     5341 cctccggcga cggctccagg ccaagttcct cctggaccgc cgccttgcag gcaagcttgc
     5401 cgctgaggtc ccgcgctgtg taatgcgacg ccaagtacgg atcgctcgcc gggttccaca
     5461 cgtcagcgtc cacgccattc atgatcccaa ccagatccgc ggcgcgcgtg cgcagcacac
     5521 cgtcaagtcc ggcaccatgt tccggcgtga ggatttccct ggcgtaggtc gggctgaccg
     5581 tggtcagtcg atcggccgtg caaatccccg ctttgagaaa ggacaactgg ccgtagaatt
     5641 cagcaacgcc cgtgccaagc agcgccgccg gcaattcagc ttcagctgcg gcgcccaaag
     5701 gaaagttacc ctgataggcc agattatgga tggtaagcac caccggaggc cgaggcccgt
     5761 catgcagcgc cagcaacgct ggcaccagag cagcgtgcca atcatgtgca tgcaccacgt
     5821 tgggtgccca gcctaacgcg tcgccatata gcgccaacgc ggtcgccgat cgacaaaagg
     5881 ctgaataacg aaggtgatta tctggccaat cgtggcgctc gggatcttga taagggccac
     5941 cgggccggcg gaacagatcg ggctgatcat acaaataaat cggcagcgga ttgtcctgga
     6001 cccgagtcag cagaacccgt ccgccatcgg gcagccgcag gacctctcgc gcctcatcga
     6061 cactgtcgag tacggacgga tacgcgggca acatgaccct cgcatcagtg ccttcctgcg
     6121 cgagcgcccg aggcagcgcg gcacatacgt cggccaaccc cccggtcttg gcgagcggat
     6181 agaattccgc gcagacgaac aagagtcgtg ggtatccgtt tgtccgcatg gctctccccc
     6241 ggctcgtccg agatttcccg tatcaggcgc tggtgatcag tggtgatctg caatgttcta
     6301 tcatggtgcg gtatgatact ttggttacaa aacgtccctg agatcacgcg gcgcaaaccg
     6361 ttcaccacgg cgcacacttg gcgctccagc cgtcttccat ttggccgcat gatcacgaga
     6421 gcatatcgat cctggtctag gcagctgccc tgggtgcgcc agagttgatc gtgtgggttc
     6481 gcggtcgcga ttgaccgtga accggcaagc gcttctccgt taaatcgtca tctatgggcg
     6541 aacttgttac gggcgatagc caactggcca ggcgcgtgcc gcgcgatgtt cggtttgccc
     6601 agaccgcttc gttacgacca ggctggtcgg atgattgggt gcgccgcggt ctggaacgcc
     6661 ccgcggttta tttggtattg gaatctgccg cggccggcgc ggcttctggc cgagaagaga
     6721 ctctcggggt gctgtccgac ctcggtcgac acagaatttt ggacaatctg atcgtgtttt
     6781 ccctgggcga aatggccttc caatcgcctg gcttatcgac gttccggact ttaccattga
     6841 cgttgacata gacggtcaat tgtcgggcca tgtgcttcgt gcaatcaagc tcgtacgtca
     6901 ccttggcgcg cggctcgacg tcggcaatgt ctgcgatctc ctccagccga gtgatgtcaa
     6961 tcgcctgggc ccggtccaag gtctctgcca ttgcgtaagg cggcatatag tgaccacggc
     7021 gtttccgcgc gacatttcgc gcgattgctc caccgaaatc ggttgcgata tcgacgtcgt
     7081 ccatagcggc ctgcgggagg cattttgctg ccatctgcat aaggccggtt ggttcccgag
     7141 cgatactcct ggcgtcatag aagcaccatg tctggccgtt ggggctcgac acgccgccgt
     7201 agaatttcca gtcggaaccg atcacccgcg cctgtgccac cgaatgatac aggacggcaa
     7261 ccagaacgga ggcgacggca ccgaccaaaa gccagacttt caatcgcatc gtttccaacc
     7321 tctcgcgacg ccggcttcag ctcgagatga aagatgaccg gaagcagaga agcctcgtcc
     7381 ccagcgaatc acctggaaat gattttcccc tcgccccccg gttgttgccg tagcaccggc
     7441 attcggagaa ttccacctct cgacgtatga ctctcgttcg acagcgaatt cctcccggat
     7501 cgggaccttg atacgcaact ggagaccgat gagcgcgcag cagatcacca tcgaagtcaa
     7561 tgaggacgag accgtctccg gcctgctgct ggtcccgacg tgtccggtcg cgtgttgtgt
     7621 tctcgcccat ggtgcgggtg ccggtatgac gcacccgttc atgaccgccg tcgccgaagg
     7681 tctgcattca cggcgcatgg ccaccttgcg ctatcaattc ccgtatatcg agcacggttc
     7741 gaaacggccc gatcggccgc ctttggcaca tgccacagtg cgcgcggcgg ttgcgacggc
     7801 gactcgtctc gccccggagg ttccgctgat cgccggaggc aaatcgttcg gggcacgcat
     7861 gacatcgcag gcccaggcac aactgccgat accgaacgta gtaggccttg tcttcctggg
     7921 ctttccactg cacccggcag gtaaaccgtc ggacgatcgc gcggcgcacc tttcggaggt
     7981 gcgggtaccg atgctgtttt tgcagggaac ccgggatacc ctcgcagaca gtaggttact
     8041 tggcaccgtg ctggaccggc tatcgcccgg ggcaacgtcg cgtctgttcg agggggcgga
     8101 tcattccttt catgtcccaa agcggtcggg caccacagac cgacaggtgc tcgacggggt
     8161 actggacgca ctggtcgcgt gggcgttgag catttgtggg ccacactgat gttcggaacg
     8221 ccgaccgcat gaccgatgct ccgtaccacg ggctcgcgcc tgcccggacg gcaacccggt
     8281 cgatcccgcg gtccggcgag gacgttgccg gatcggacct gatccgcaca atgaaccccg
     8341 ccaaaatcca atatctggaa ggattacgag gcatcgccgc ggtgcaggtc gtgttgcttc
     8401 acttcgttac cggatttctt ccaaacaccg cggagcacgc tgtgccaccc ttgaagataa
     8461 tgtgggacgg ccatactgcg gtttacgtct tcttcctgat cagcggcgct gtactgacgc
     8521 catcgttcgc gcgcggcgga cgatggccgc ggcagtcgat caaacggctc gtccgtctcg
     8581 gtctcccgat cgtcgttgcc gcggtcattg cgtttgcact gctgataacg atgccggacg
     8641 cacaccttgt tgccgcgcga ttgaccggat cgggctggct ggccatggat tccactgccg
     8701 cgacgacact gacccatctt ttgcgtgaga tcaccctcga cagtctgaca ttgggctacc
     8761 gtgaatatac cttgtttacg cccattgccg gccggctgcc attgctcgaa aacgcgctga
     8821 atgcaccatc atggtcgttg catttggaat tatacgggtc aatgctggtg cttgggcttg
     8881 tgctgttgcg cgcgcgagcg ccgcgtgtcc atttcgcggc tgtggcgatg tgcgcaattc
     8941 tgttcggcac acacccgatg ttcttattcg tcctcgggca catctgtgcg aaccaactgc
     9001 gcaaaccacc acgaccggta atcggcgcca gtctaatcat tctgggtctg gccatgagtg
     9061 ccaccaagga ctggactgtt ctggagactg ttcgtatggc aatcgccagg ttcgctccag
     9121 ccgcggcacc gaatttattt caattccaaa gccaaatggc cgccgtggcg ctgttcatag
     9181 gtgtgttgtt aaccccagtg gcgcaaaggt tgctgtcgtt atgcgggcgt ctcggccgac
     9241 tgtcgttcag tatttatctg ctgcatttcc cgatcctgtt caccgtcgcc tgtgctggct
     9301 tcatcccgtt ggcctccagg tttcctgaac cggtagcggt cgccatcaca tttatcggtt
     9361 tcgctgttat cgtttggctt gccgccgaag ggttcgaacg tttggttgat cgcccatccg
     9421 tcctgttgag ccggcgcatc gatccgcgac aacaattggc accggcttga tggcctacgc
     9481 gacagggcgg ccggtttctc taatcctccg gcggcgtcac gatgactcga ccattcgcta
     9541 agacccaggg acctcatctc acggtggcgc atgctgcgtg gtggatcgcc ctggctgtgt
     9601 tgtcggtcgc cctgcttgct cctctgctga tcaccgatgt gccaccggtg ttggactacc
     9661 cgaaccacct ggctcgcctg gtgctgctcg ctgccggtcg tcacgacaaa gtgctcggac
     9721 cgatctttga gccgaattgg acgatcatcc ccaacctggc cggtgacgcg atcggcctga
     9781 tgctgctgca cgtgttgccg gtctacaccg cgggccgttg tctgttgggc ggcgtattgt
     9841 tgctgaacct ggccggtgtg gtcgcgttgc atcgtgcata tttcggacgg cgatcgttct
     9901 ggccactcgg atccgccctc gtcgcctata acgccacgtt cctgctcggg tttttgaatt
     9961 ggcaaatcag cagcgggctg gcgatgctgt tcgctgccgg ttggctgacc tggcgagaac
    10021 tcagaccgtt cacaaccttg gcggccgcca tggcggcatc ggttctgttg tttttttgcc
    10081 atctgatggg cgtcgtgttt tttctcgtgc tgattggcag cgccgaactg cgtgcgatgc
    10141 gagaccttcg ggccgtgctg gtccgcggcg ccggcttatt ggccgtgctg gcgggtccaa
    10201 tcgcgcttgc aattcttgcc gaggtgcata atgcacctgc ggcgctgagt tggcccaggg
    10261 tggacgtgaa actggtgaat gcggcg
//
LOCUS       DATAVD010001227         1982 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1046840, whole genome shotgun sequence.
ACCESSION   DATAVD010001227 DATAVD010000000
VERSION     DATAVD010001227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1982)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1982)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1982
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1046840"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            116..886
                     /locus_tag="VHX39_23485"
     CDS             116..886
                     /locus_tag="VHX39_23485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014626632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3994147.1"
                     /translation="MQSPLDTATPLVRVRNLLLTLPSAAGAVNILRGIDLDIGRGEAL
                     GLLGPSGSGKTSLLMLLAGLERATSGSIELAGQTITAMNEDALARMRRSQVGIVFQAF
                     HLIPTMTALENVAVPLELAGHRDANARAASALDAVGLTHRLTHLPSRLSGGEQQRVAI
                     ARAFAHEPSLLLADEPTGNLDHATGAMVMDLLFALRAHHGSTLLLITHDAALAARCDR
                     QIRLVDGKIARCDAGLAPVSRDTTGLVDRGSTTENEAP"
     gene            883..>1982
                     /locus_tag="VHX39_23490"
     CDS             883..>1982
                     /locus_tag="VHX39_23490"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX3994148.1"
                     /translation="MTAARLTAAGSPLAATSETTATSPWQTISLAFRFARRDLRGGVR
                     GLATVLLCLALGVGVIAAVGSLRAAVDAGLAADGRRILGGDVAIDAGNTPLPDTLRHW
                     LRERGATTSGVTMMRSLLVAPSGERTLIELKAVDAAWPLVGQAEAAPPQSIAQALEER
                     DGHFGLLADPLVLDRLGLKPGDLARLGTATFRVSGALTEEPDRVATPSIFGPRVLISQ
                     AALAGTGLIAPGTMAQNALRATLPPSAAQTIPAELRETFSDQGWHIRDPTQAAPQVTR
                     FLDQTSLFLTLVGLTSLLVGGIGVANGVGAWLDARGRTIATLRCLGASSGLVLAMSLI
                     QVMTLSGLGIILGLAVGAAVPLAIAVLPHAWLP"
BASE COUNT          308 a          682 c          646 g          346 t
ORIGIN      
        1 cggagcggca aaggcatgcg gcaacatcgt tacaatcatg caaaccaaga ggatcagccc
       61 gcggcggccc tgtctaattg ccgcgccctc gccatatggt ggcgccatgg ttgcgatgca
      121 gtccccgctc gacacggcga cccctctcgt cagggtgagg aacctcctgc tgaccctgcc
      181 ctcggcggcc ggtgcggtca acattcttcg cggcatcgac ctggacatcg gtcgcggcga
      241 ggctctggga ctgctcggcc cgtccggttc cggcaagacc agtctgctga tgctgctcgc
      301 cggattggag cgcgccacgt cgggctcgat cgaacttgcc ggccagacca tcactgcgat
      361 gaatgaggac gcgctggcca ggatgcgccg gtcgcaggtc gggatcgtat tccaggcgtt
      421 ccatcttatc ccaacgatga ccgcgctgga aaacgttgcg gttccgttgg aactggccgg
      481 tcaccgcgat gccaatgccc gcgccgcatc agccttggac gccgtagggc tgacccaccg
      541 gctgacccac ctgccctcac ggctgtccgg cggtgagcag cagcgcgtcg ccatcgcccg
      601 agccttcgcc cacgagccga gcttgctgct ggccgacgag ccgaccggca acctcgacca
      661 cgcgaccgga gcgatggtga tggacctact gtttgctttg cgtgcccatc acggcagcac
      721 gctgctgctg atcactcatg atgcggcgct cgcggcacgc tgtgaccggc aaatccggtt
      781 ggttgacggc aagattgccc ggtgcgacgc cggcctggcc cccgtttcgc gtgacacaac
      841 gggcctcgtc gaccgcgggt cgaccacaga aaacgaggct ccatgacggc ggcccggctt
      901 acggcggcag gcagcccatt ggcagcgaca tccgagacca ccgccacatc gccatggcag
      961 accatcagcc tcgccttccg cttcgcgcgc cgcgacctgc gcggcggtgt ccgaggcctg
     1021 gccacggtcc tgctctgcct cgctctgggc gtgggcgtga tcgccgcggt cggcagtctt
     1081 cgtgctgccg tggacgccgg cctcgccgct gacggccgcc gaatactggg cggcgacgtt
     1141 gcgattgatg ccggcaacac cccgctcccc gacacgctgc gacactggct gcgcgagcga
     1201 ggggcaacga cctccggcgt caccatgatg cgctcgctgc tggtcgcgcc ctccggcgag
     1261 cggaccctga tcgaactgaa agccgttgac gccgcgtggc cgctggtcgg tcaggcagag
     1321 gcagcgccgc cccagtcgat tgcgcaggca ttggaggagc gggacgggca tttcgggctg
     1381 cttgccgatc ccttggtgct ggaccgtctg ggcctgaaac cgggcgatct ggctcggctc
     1441 ggcactgcca catttcgagt atccggtgca ctgacagaag agcccgaccg ggttgccacc
     1501 ccgtccatat ttggccccag agtgctgatt tcgcaggcgg cactggcggg aaccggtctg
     1561 atcgcgcccg gcaccatggc gcaaaatgcg ttgcgtgcca cgctaccgcc atcggcagcc
     1621 cagacgatcc cggccgaatt gcgggagacg ttctccgacc agggatggca catccgcgat
     1681 ccaacccagg ccgcgccgca ggtcacacgg tttctcgatc agaccagtct gttcctgacg
     1741 ttggtcgggc tgacctcgtt actcgtgggc gggatcggcg tcgccaatgg ggtcggtgcc
     1801 tggctcgacg cacgaggccg gacgatcgca acattacgtt gccttggcgc atcatctggg
     1861 ctggtactgg cgatgtcgct gatccaggtc atgacgctct ccgggctggg catcatcctt
     1921 ggcctggcgg tcggagccgc tgtgccattg gcaatcgcag tgttgccgca cgcttggctg
     1981 cc
//
LOCUS       DATAVD010001228         2544 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_864539, whole genome shotgun sequence.
ACCESSION   DATAVD010001228 DATAVD010000000
VERSION     DATAVD010001228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2544
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_864539"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..739
                     /locus_tag="VHX39_23495"
     CDS             <1..739
                     /locus_tag="VHX39_23495"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3994149.1"
                     /translation="GLVAVNDVSLSVEPGEIRGLIGPNGAGKTTLFNLVSGTIPPSGG
                     TVHFDERDITRVPMHALVRRGLVRTFQHAQLFPTFSVLKNVLVGLHVHAHSGFWPGLI
                     DPPSSRRHNDDLHQRAVDIIRFVGLQGREEETAGSLSHGYKRILQVAIGLAPKPRLLL
                     LDEPVAGMNHADVDRMMALVRSLRDAQGITVILVEHNIRAVMNVCDRISVLQFGRKIA
                     EGSPQEVSQDPKVIEAYLGVADDEDAA"
     gene            729..1436
                     /locus_tag="VHX39_23500"
     CDS             729..1436
                     /locus_tag="VHX39_23500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014189040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3994150.1"
                     /translation="MLLEVSTIAVAYGTAQVLHGLSLTVATGETVTLIGANGAGKTSC
                     LRAISGLEPLTSGNIQFEGERIDTLTPRQRLERGLVHVPEGKRLFTRMTVRENLAMGA
                     FLRTDGSAIRSDIDAMYARFPILEARHKQAAGSLSGGEQQILAFARGLMARPKLLLVD
                     EPTVGLSPLMVRELSAALRAIHADGVAILLVEQNAAMALRLASRGYLLETGSCVAEDE
                     TKALMANDYVRKAYLGI"
     gene            1451..2515
                     /locus_tag="VHX39_23505"
     CDS             1451..2515
                     /locus_tag="VHX39_23505"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3994151.1"
                     /translation="MKFGFCIMSDIDEIGFFSFIENLGYDSAWVADSQMMYSDVYMVC
                     ALAAQQTKRLRIGPGTAICGTRIPPVQVAAMATLNRMAPGRVFLGIGTGNTAMRTMGQ
                     KPMKMAAFGEYLRVLSGLLDGQVTEYAFEGRSRPVKMLRHETRFMNLRPRIPLYVSGF
                     GPRAMALAGEYGDGLVFAIPPRGVPVQDALGHVRQGAARNGRDMSGFRNATLTSVALL
                     QPGEAADSDRIKRSIGPNVMASVYYFYDMVHETGIEPPDFLKRIWKPYCALVEQTPPE
                     HRHFRTHEFHYTDLHPNEAELIDTQLIHDTCLVGTADELVERIRGLEQDGLQEMVFAV
                     GNETKWRLAEEFSRTVMARL"
BASE COUNT          465 a          764 c          855 g          460 t
ORIGIN      
        1 tgggctggtc gccgtgaatg acgtttcgct gtcggtcgaa cccggcgaaa tccgcggcct
       61 gatcgggccg aacggtgccg gaaagaccac gctgttcaat ctggtcagcg ggacgatccc
      121 accgtcaggg ggaaccgttc atttcgacga gcgcgatatc acccgggtgc cgatgcacgc
      181 gctggtccgg cgcggcctgg tgcgcacgtt ccagcacgcg caactgtttc caacgttctc
      241 cgtcttgaag aacgtcctgg tcgggctgca tgtccacgcc cattccggct tctggcccgg
      301 gctgatcgat ccgccgtcat cccggcggca caacgacgac ctgcatcagc gcgccgtgga
      361 catcatccgc ttcgtcggcc tgcaagggcg cgaggaggaa accgccggca gcctgtcgca
      421 tggctacaaa cgcatcctgc aggtggcgat cggactggcg ccgaagcctc ggctgctgct
      481 gctggacgaa ccggtggcgg gcatgaacca cgccgatgtg gaccgcatga tggcgctggt
      541 ccgcagcctg cgcgacgcac aaggcatcac ggtcattctg gtagagcaca atatccgagc
      601 ggtcatgaat gtgtgtgatc ggatcagtgt tctgcagttc ggacgcaaga tcgccgaggg
      661 ctcgccgcag gaagtttcac aagatccgaa agtcattgag gcgtatctgg gcgtggcgga
      721 tgacgaagat gctgcttgag gtatcaacca tcgctgttgc ctacggcacc gcgcaggtgc
      781 tgcacggcct gtcgctgacc gtcgcgacag gcgaaacggt caccctgatc ggcgccaacg
      841 gggcgggcaa aacatcctgc ctgcgggcga tttccggcct ggaaccgctg acctcgggca
      901 acatccagtt cgagggcgaa cggatcgaca ccttgacgcc tcgccagcgc ctcgaacgcg
      961 gccttgtcca tgtgccggag ggcaagcggc tgttcactcg tatgacggtg cgggagaatc
     1021 tggcgatggg cgccttcctg cgcaccgacg gatcggctat ccgttccgat atcgacgcaa
     1081 tgtatgcgcg tttccccatt cttgaggcgc ggcacaagca ggccgccggc agcctgtcgg
     1141 gtggcgagca gcaaatcctc gcctttgccc gcggcctgat ggctcgaccg aaactgctgc
     1201 tggtggatga gccgaccgtc gggctgtcgc cgctgatggt gcgggaactg tccgccgcgc
     1261 tgcgggcgat ccatgccgat ggcgtcgcca ttctgctggt ggaacagaac gccgcgatgg
     1321 cgctccgcct tgccagccgc ggctatctgc tggaaaccgg gagttgcgtc gccgaggacg
     1381 aaaccaaggc gctgatggcg aacgattacg tgcgcaaggc ctatctcggt atctgaggaa
     1441 ggacggaacg atgaaattcg gtttctgcat catgtccgat atcgacgaga ttggcttctt
     1501 cagtttcatc gagaacctgg gctacgattc cgcctgggtc gccgacagcc agatgatgta
     1561 ctccgacgtc tacatggtct gcgcgctggc ggcgcagcag acgaaacgcc tgcgcatcgg
     1621 ccccggcacc gcaatttgcg gcacgcgcat tccgccggtg caggtggcgg cgatggcgac
     1681 gctgaaccgc atggcgccgg gccgtgtgtt cctgggcatc ggcaccggca acaccgcgat
     1741 gcgcaccatg ggccagaagc cgatgaaaat ggcggcattc ggcgaatacc tgcgggtgct
     1801 gtccggcctg ctggatggac aggtgacgga gtatgcgttc gagggccgct cgcggccggt
     1861 gaagatgctg cggcatgaaa cgcgcttcat gaacctgcga ccgcggattc cgctgtatgt
     1921 ctccggattc ggcccgcgcg cgatggcgtt ggcgggggag tatggggatg gattggtatt
     1981 tgccatcccg ccgcgtggcg tgcccgtgca ggacgccttg ggtcatgtgc gccagggagc
     2041 ggcgcgcaac ggtcgcgaca tgagcgggtt ccgtaacgca acgctaacga gcgtggcgct
     2101 gctgcaaccg ggcgaggcgg ctgactcgga ccggatcaag cggtcgatcg gacccaatgt
     2161 catggccagt gtctactatt tctacgacat ggtgcatgag accgggatcg agccgccgga
     2221 tttcctgaag cgcatctgga agccctattg cgcgctggtc gagcagacgc cgccggagca
     2281 ccggcatttc cggacgcatg agttccacta caccgatctg catccaaacg aggcggagct
     2341 gatcgacacg caactgatcc acgacacctg cctggtcggg acggctgacg aactggtcga
     2401 gcggatcagg gggctggagc aggatgggtt gcaggaaatg gtcttcgcgg tcggaaacga
     2461 aacaaaatgg cggctggccg aggaattttc gcgaaccgtg atggctcggt tgtaaggttg
     2521 tccggcaaac agcccgcatg cggc
//
LOCUS       DATAVD010001229         2957 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_302582, whole genome shotgun sequence.
ACCESSION   DATAVD010001229 DATAVD010000000
VERSION     DATAVD010001229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2957
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_302582"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2615)
                     /locus_tag="VHX39_23510"
     CDS             complement(<1..2615)
                     /locus_tag="VHX39_23510"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3994152.1"
                     /translation="MTSDASSTVEQVGNEVVSGTADPRSASSPEGKFRPIRSQGDAAA
                     EATANLVETDGTAPARRILAIGAIEAIDHQHIVGWAWYRPTPDEPIEIEVLVDDVVVM
                     AAQADLLRPDVAALGAGNGRHGFLIRNLARHVPPGPHNIRVRRARDRLDIPGSPKPII
                     GPEPGADDTEHGGGSSSEMDPDISIAAAAGDAPAGESAAGEARRTVEGPSPDAKAQTE
                     AAILDSPVEQAEVAGKIAGVETAGTPGSAKARPIGNLDRVSFDEISGWVWDTDHPEQA
                     VDIEILDGDVVVLKVTADQFRPDLADAGMGTGHHGFTVRNLGGILPLSRHRVRVRRAA
                     DGKDLPRSPMIISRNVLDQGAMTFMNDVMFSAIEAASKPDDLSQPLGYLLMLLNDVVN
                     GHEALGRAQGAPFKTAPAEIADTLQLTGRTRDLVDQLRYTFQPLYYEPSDTPEVSIII
                     PVHNKFSTTYNCLDSIVKAPPDRTFEIIIADDCSDDETLLAALVFSGAVRIVRNTSNL
                     GFVRTCNAGAALARGRYLLFLNNDTLVKPGWLDELVQTFEQVPNVGIAGSKLLFPDGK
                     LQEAGGIIWRLGDGWNWGRGRDPNEPAFSFLRDADWVSGAALMIERPLFEQLGGFDEY
                     YAPAYYEDTDLAFRVRALGKRVVVQPASEIVHLEGVSAGTDTSGPGMKRFQVVNHAKF
                     YRRWKDTLITHRLNGQQPEMEAERLVRQRAYFIDDSVPTPDQDAGSNAAVEHMRGLLA
                     LGYKVTFLPADNMSRIDPYTAQLQKLGIECPVHPYFWSVEEVFRKAQHKPDLVYLHRY
                     SNASKYATMVRRYFPGCRVVYNVADLHFLRMERQAEIDPASVSAAQAAAQRRDEIAVM
                     RNVDSVIVHSSVEAA"
     gene            complement(2674..>2957)
                     /locus_tag="VHX39_23515"
     CDS             complement(2674..>2957)
                     /locus_tag="VHX39_23515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994153.1"
                     /translation="DVEVELNASPFLVPDMLSAQNAFIFLGGLFVGYLTFTAHVVRSF
                     PVNRGVVSGRSTRLSLVIPTAASPHALNLSEDLRQLGIYLTSITFKTTS"
BASE COUNT          581 a          959 c          868 g          549 t
ORIGIN      
        1 aacgcagctt cgaccgagga atgcacgatg acactgtcga cattgcgcat cacggcaatt
       61 tcatcgcgcc gctgcgccgc tgcctgtgcg gcactcaccg aggccgggtc gatctccgcc
      121 tggcgttcca tgcgcaggaa atgcaggtcc gccacgttgt aaacgacccg gcacccgggg
      181 aaataccgcc gcaccatggt cgcgtatttg gaagcgttgc tatagcgatg caaatacacc
      241 agatcgggct tgtgctgcgc tttgcggaat acctcctcca ccgaccagaa atacggatgc
      301 accgggcact caatacccag cttctgcaac tgagccgtat acggatcgat ccgcgacata
      361 ttatcggccg gcaaaaacgt gaccttgtag cccagagcca ataacccccg catgtgctcg
      421 accgcggcgt tggaaccggc gtcctgatcc ggcgtcggca ccgaatcgtc gatgaagtac
      481 gcccgctggc gcaccagccg ctcggcttcc atctcgggct gctggccatt cagccggtgg
      541 gtgatcagcg tgtccttcca gcgccggtag aatttggcat ggttgaccac ctggaaccgt
      601 ttcattcccg gccccgaggt gtcggtccct gcgctcacac cttccaaatg cacgatttct
      661 gacgccggct gcaccaccac ccgcttgccc agagcacgca cgcggaacgc cagatcggtg
      721 tcctcgtaat acgccggcgc ataatattcg tcgaagccgc ccagttgctc gaacaacggc
      781 cgctcgatca tcaacgcggc gccggacacc cagtcggcat cacgcaggaa cgaaaacgcc
      841 ggctcgttgg gatcgcgccc gcggccccag ttccagccgt cgccaagccg ccagatgatg
      901 ccgccggcct cctgcagctt gccgtccgga aacagcaact ttgacccggc gatgccgaca
      961 ttcggcacct gctcgaacgt ctgcaccagt tcgtcgagcc agcctggttt gaccagcgta
     1021 tcgttgttca ggaacaacag ataccgtccg cgggcaagcg ccgctccggc gttgcaggtg
     1081 cgcacgaacc ccagattgga ggtattacgc acgatccgca cggcgccgga gaacaccaaa
     1141 gccgccagca acgtctcgtc gtccgaacaa tcgtcggcaa tgatgatctc gaatgtccgg
     1201 tccggtggcg ccttcacgat cgaatcaagg cagttatagg tcgtggaaaa cttattgtgc
     1261 accggaatga tgatcgaaac ctcgggagta tccgacggct cgtaatacag aggttgaaac
     1321 gtgtagcgca attgatcgac aaggtcgcgg gtgcgcccgg tcagttgcag cgtatccgcg
     1381 atttccgccg gcgccgtctt aaacggcgcg ccttgcgccc ggccaagtgc ctcgtgcccg
     1441 ttaacgacgt cattcagcag catgagcaga tagccgagcg gctggctgag gtcgtcgggc
     1501 ttcgacgcgg cttcgatggc ggagaacatc acgtcgttca tgaacgtcat cgcgccctga
     1561 tccagcacgt tgcggctgat tatcatcggc gagcgtggca ggtcctttcc gtcggctgcg
     1621 cggcgcacac gcaccctgtg gcgggacagc ggcaggatcc cgcccaggtt gcggactgta
     1681 aagccgtgat gtccggtgcc catgccggca tcggccaaat cgggtcggaa ctgatcggcg
     1741 gttactttca agaccacgac atcgccgtcg aggatttcga tgtcgaccgc ctgttcggga
     1801 tggtccgtat cccagaccca gcccgagatc tcatcgaagc tgacgcgatc gaggttgccg
     1861 atcggtcgcg ctttggccga acccggcgtg ccggcggttt ccacgcccgc aatcttgccg
     1921 gcgacctccg cctgttcgac cggagaatcg aggatcgcag cctcagtctg agccttcgca
     1981 tccgggctcg gaccctccac cgtccgccga gcctcgccag cagcactttc accggcaggt
     2041 gcatcaccgg ccgcggccgc gatggaaatg tcgggatcca tttcgctgga ggaaccgccg
     2101 ccatgctctg tatcgtccgc tcccggttcc gggccgatta tcggcttcgg tgaaccggga
     2161 atatcgagac gatcccgggc gcgccgaaca cgaatgttat gcggcccagg cggcacatgc
     2221 cgcgccaaat tacgaatcaa aaagccatgc cgtccgttgc cggctccgag cgccgccaca
     2281 tccggtcgca gcagatccgc ttgtgccgcc attactacga catcatccac cagaacctcg
     2341 atttcgatcg gttcgtccgg tgtgggcctg taccaggccc aacctacgat gtgctggtga
     2401 tcgattgcct cgatagcgcc aatcgccagg attcggcgcg ctggagctgt gccgtcggtc
     2461 tcgaccagat tcgctgtcgc ttccgcggca gcatcaccct gcgaacggat cggacggaat
     2521 ttgccttccg gcgaagatgc gctgcgagga tccgcggtac ctgagacgac ttcattgccc
     2581 acctgctcga ccgtggaaga ggcgtccgat gtcatggcag cctggtgcag ctggtcgtcg
     2641 gcctgcgggc aagagatgtc cggtctgggt acatcatgat gtggtcttga aggtgatcga
     2701 tgtcaggtaa atgcccagct ggcgcaaatc ttcgctcaga ttcagcgcgt gcggcgaggc
     2761 cgcagtcggg atcaccaagg atagccgcgt cgagcgaccc gacaccacac cacggttgac
     2821 cgggaacgac cggaccacgt gcgctgtgaa ggtgaggtaa ccaacgaaca accctcccag
     2881 aaatataaat gcgttctgtg ccgaaagcat gtcgggcacc agaaacggcg aggcattcag
     2941 ttcgacctcg acatcct
//
LOCUS       DATAVD010001230         8607 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2539053, whole genome shotgun sequence.
ACCESSION   DATAVD010001230 DATAVD010000000
VERSION     DATAVD010001230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8607
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2539053"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            762..1610
                     /locus_tag="VHX39_23520"
     CDS             762..1610
                     /locus_tag="VHX39_23520"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3994154.1"
                     /translation="MIKCREMNESDISAAQDLLTRSFKPPREYWQRAISRLAGRPRVD
                     GFPKYGFVLDDDTRIVGVLLLITTSVRINGVAENRTNVSSWCVEPDHRGYAAILSMLA
                     TRRRDTTYFNTTPAPHTWKTIEHHGFQKFAAGRVVALPALSASPRGAAVQEISSRLLP
                     RLTMDQGEIDLLMDHKAYGCLSLVCEFAGVQYPFVFVRQYRYGVVPLAHLMYCRDIAD
                     FTRFAGTLGRFLLRHGFAVVVTDANGMMPGLVGKYFGNRPRYRKGGTAIRVGDVAYSE
                     QALFGF"
     gene            1955..2887
                     /locus_tag="VHX39_23525"
     CDS             1955..2887
                     /locus_tag="VHX39_23525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019091785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX3994155.1"
                     /translation="MVSELRAEPGYFLSLPTGHDGWLVARRLRAIRRGAMILGLTLPS
                     MAVQAVCLALPGRAKVAFPRFFWGRFAATLGLEVRVVGQLAAKPSGRPVIFVSNHSSW
                     VDVPVVGAALPAAFVAKGDIEGWPVVRTIARLGRTIFVSRQRGSTARERDAMAAVLAR
                     GDNLILFPEGTSSDGSRVLPFRSSFFAIAEGRGIDDPNRRPLIQPVSVVYDRLNGLPA
                     GRSSRPVFAWYGDMDLASHFWRMTQHLDMRVTVLLHAPLDPATFPDRKSLALAVWQTV
                     ADGASMLRQNRPAVPLSVEPVRPDGYIEQEPAYA"
     gene            3597..4958
                     /gene="miaB"
                     /locus_tag="VHX39_23530"
     CDS             3597..4958
                     /gene="miaB"
                     /locus_tag="VHX39_23530"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003622988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEX3994156.1"
                     /translation="MTGTVLTSRKHLHVITWGCQMNVYDSGRMSDVLAPLGYVASDTP
                     EGADMVILNTCHIRDKAAEKVFSELGRLRRLKEATGGRMILAVAGCVAQAEGKEILSR
                     APYVDIVLGPQTYHRLPEMVAQASRAGGAVIETDFPPEDKFDHLPEQSAPQGVTAFLT
                     VQEGCDKFCSFCVVPYTRGAEQSRPAAGILAEARRLIAQGSREITLLGQNVNAWRGAA
                     PDGGTWGLGALLRAMAALPGLFRLRYATSHPRDMDDALIEAHRDLPVLMPFLHLPVQS
                     GSDRVLTAMNRKHTADDYLRLVNRLRAARPGLALSSDFIVGHPGETEADFAATLELVR
                     SVGFAQAYSFKYSPRPGTPAAGAPGQVPEVEKDRRLQMLQALLREQQSQFNAACNGAV
                     MDVLFTGPGRHPGQIVGRSQYLQPIHITGSGSLIGEERAVRIRDVHPNSLSGTLVQES
                     ISA"
     gene            5039..6001
                     /locus_tag="VHX39_23535"
     CDS             5039..6001
                     /locus_tag="VHX39_23535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEX3994157.1"
                     /translation="MLLPLLLGDHDRHLVRIEQALGVRLSCRGNRVAIAGDSARVDAA
                     QSALQGLWRRLERGESVGRPDVEAAIRMVEIETDPRLPLSDLPAIRTRKGAVGPRSAG
                     QVAYMEALASHEMVFGVGPAGTGKTYLAVAQAVAMLQAGRVDRIVLSRPAVEAGERLG
                     FLPGDMKEKVDPYLRPLYDALHDMMPADQVLRRMTNGEIEVAPLAFMRGRTLAHSFAI
                     LDEAQNTTAVQMKMFLTRMGEGSHMVITGDLTQVDLPSGMRSGLADALDTLEGVQGIS
                     VVRLNNRDVVRHPLVGRIVDAYDQRAAAEGDTRREAGARAGGGD"
     gene            complement(6070..6372)
                     /locus_tag="VHX39_23540"
     CDS             complement(6070..6372)
                     /locus_tag="VHX39_23540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HEX3994158.1"
                     /translation="MPMKNPPHPGRIVRQECLEPLGLTVTDAAKALGVSRNALSELLN
                     ERRGISPEMAIRLDKAFGGGADTWHHMQAAYEMAQAMRHADQIKVRRVPWPALVAE"
     gene            complement(6385..6663)
                     /locus_tag="VHX39_23545"
     CDS             complement(6385..6663)
                     /locus_tag="VHX39_23545"
                     /inference="COORDINATES: protein motif:HMM:NF016875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin, RelE/StbE family"
                     /protein_id="HEX3994159.1"
                     /translation="MIKSFRHRGLRRLYERGEAAQVRPDMLEKIENILARLDVATTPD
                     KMDIPGFRLHPLKGDLRGFWAVTVRANWRIIWRFEGTDAIDVDLIEYH"
     gene            6938..7990
                     /locus_tag="VHX39_23550"
     CDS             6938..7990
                     /locus_tag="VHX39_23550"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3994160.1"
                     /translation="MPSRPLIEGPSAWIGADLRSRESEWSYRLTPTEVAEIETAVATV
                     RHLDLDIADIRRGHFPLPTLGPVLERLRSEVLNGRGFVLLRGMPVENRPIAESAIAYW
                     GVGTYFGSARSQNAKGHLLGHIYDLGGSSATDPTIRSYATAERQNYHIDRCDVVALLC
                     LRRAKSGGLSAIVSSMTVHNVMAQRRPDLLERLYQSFPVDRRGEVPPGKQPFYEAPVF
                     NEHNGYLSVLYSRLHIGSAQRFPEARRLTSEDYEALDMLAELASDPDLRLDMTFMPGD
                     IQFLHNHTILHARSEYEDWPEVERKRHLLRLWLAPPNARPLPPVFAECYGNITIGDRG
                     GIVCEGTRLHAPLVPG"
     gene            8165..>8607
                     /locus_tag="VHX39_23555"
     CDS             8165..>8607
                     /locus_tag="VHX39_23555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994161.1"
                     /translation="MYRLADGDDDWQPIQNGLPDAPAIRALAVHPLHPEVIFAGTQSG
                     PYRSDDRGEHWEKIDIADHGLPVWSFLFHPYDPDVMFVGYENCGIYRSDDAGERWTRL
                     PVSVRFPDITTTAGANPAKRVLKMDASVAEPDHLYAAIEVGGTLRS"
BASE COUNT         1566 a         2731 c         2660 g         1650 t
ORIGIN      
        1 tgctgtcctg cggagcgccg acaacaatct ggagaaacca gcgaaaacgc gccggcttga
       61 gtgtcgggta cccatcaggc gctcaacaag cgggcaacct gacgtcgaaa agacccgcct
      121 gccttgtgcg taacccccta ttgaaccgag tcgtttctcc cgccattatt gccatctgtt
      181 cggattcccc ccccttcgcc aagaggacga gatggctcag cggagccggc ctgataactc
      241 ggtcgggcat gtcgtcatga ctgccggtga attcggccag gtgacggaaa gcaacctggg
      301 cgtcatcgcg gctctgggcc agggtgataa acatctctgg tcgaaagatc ggtgaatccc
      361 gtgctggtcc ggtgctgaaa ttcgcccacc aggatccctg gctggcagat ttgccatgtt
      421 cggatacctt atgatccctt ccttcagcgc cgatgacggt cggccgtttc gctacgctga
      481 gcacaactgc ttgcgcgacg ctaccttgcc gcctgttatg ggatgatctg gatggatcgg
      541 acgattggcc gagactgccc cgatcccggg agtcttgccg cgctgattgc agcgctgccg
      601 cccggtgcga caggtgttta tttccacccc gtgatttgcg agggcatcca actgttcaac
      661 gccgacctcg tgaccctgcc gggcgctcgc agttgccagc cgcaacgtaa gagacagatc
      721 aactgctgcc gacccgttcg ctccgcgagg gagcgagcca gatgatcaag tgtcgggaga
      781 tgaacgagag tgatatcagc gccgctcagg atctgctcac acgcagcttc aagccgccga
      841 gggaatactg gcagcgggca atcagcagac tggccggtcg cccccgggtc gacggattcc
      901 ccaaatatgg cttcgtgctg gacgacgaca cccggattgt cggcgtcctg ttattgatca
      961 ccaccagcgt tcggatcaac ggtgtggccg aaaatcgcac caacgtatcg agttggtgcg
     1021 tcgaaccgga ccatcgaggc tacgccgcga tcttgtcgat gctggcgacc agacgccggg
     1081 atacaacgta ttttaacacc acccctgcgc cccacacgtg gaagaccatc gaacaccatg
     1141 gctttcaaaa attcgccgca ggtagggtcg tggcactccc agccctttct gcatcacctc
     1201 gcggggccgc cgtgcaggaa atatcctcgc gtctgctgcc tcgtctgaca atggatcagg
     1261 gcgaaatcga tctgttgatg gatcacaagg cctatggctg tctcagcctg gtttgcgaat
     1321 ttgctggcgt gcagtatccg ttcgtcttcg tgcggcagta ccggtatggg gtcgtgccct
     1381 tggcgcacct gatgtactgc cgtgacatcg ccgacttcac ccgcttcgct ggcaccctcg
     1441 ggcgcttttt gttacgccat ggcttcgctg ttgttgtcac ggatgccaac gggatgatgc
     1501 caggactcgt cgggaaatac tttggtaatc ggccaaggta ccggaagggc ggcacagcaa
     1561 tacgcgtggg cgacgtggcc tattccgaac aggccttgtt tggtttctga tttgcagatt
     1621 gaccatgtcg cgatggttgg tccgcctcgg tggcgcgcat cgacatggcg gagagccggc
     1681 gccagatcgt tattgccacg aaacacatag cgatcgccgg tgtcatctgg ttgccgatgt
     1741 ctgagtgcaa ccccccacaa ctgtgcagtg gatttccttg aacgtccggc aagagatgcc
     1801 aattgggcgc ccgcacaatt ctccggacct ccatcaaacc gccattgtcg tcatcgtgcg
     1861 caggttctat tgggccgcga tggccaatgt ccccgcaccc acggagtcac gccggcccgc
     1921 ggcccacaca ggggctctgc tgcaccggcc caggatggtg tccgagctgc gggcggagcc
     1981 ggggtatttt ctgtcgctgc caaccggcca cgacggatgg ttggtcgcac gtcggcttcg
     2041 cgccatccgc cgaggtgcga tgatccttgg cctcacattg cccagtatgg cagtccaggc
     2101 ggtgtgcctg gcgctgcccg gaagggcgaa agtggccttc ccgcggttct tttgggggcg
     2161 tttcgccgcc acgctcggtc tggaagtccg cgtcgttggc caattggcgg caaagccctc
     2221 cggccggccg gtgattttcg tctcgaacca ttcgtcctgg gtggacgtcc ccgtggtcgg
     2281 tgccgcgctg cccgccgctt tcgtcgccaa aggcgacatc gagggctggc cggtggtccg
     2341 caccattgct cgccttggcc gcacaatttt cgtcagccgc caacgtggct ctacggcacg
     2401 cgagcgcgac gcgatggcgg ccgttttggc acgcggcgac aacctgatcc tgtttccgga
     2461 aggcaccagt tcggatggct cccgcgtgtt gccgttccgg tcgtcgtttt tcgccatcgc
     2521 cgagggacgg gggatcgatg acccgaaccg ccggccgctg atccaaccgg tgtcggtggt
     2581 ttacgaccgg cttaacggcc tgcccgcggg ccggtcgagc cgaccggtct tcgcctggta
     2641 tggcgacatg gacctcgcgt cgcatttctg gcggatgacg cagcacctcg atatgcgggt
     2701 gacggtgctg ttgcacgcgc cgctcgaccc ggcaacgttc ccggaccgca agagtcttgc
     2761 gttggcggtg tggcagacgg tggcggacgg cgcttcgatg ctgcggcaga accggccggc
     2821 ggtgccgctg tcggtcgaac cggtgcggcc ggacggttat atcgaacagg aacccgccta
     2881 cgcgtgagac aacgtggttc gcggccatgc ccaggctggt catccccagg catcattcag
     2941 cagacgcggc acaagcgttc gctggcaata cagccgctta ttcgctcgcc tggccccggt
     3001 ccgggttcag cggcgtccgc aacgatccaa aattacccga cgggcctctc gctcgtcgcc
     3061 cgcctgacgg tacgacaccc cgagacacca gtcgtaatgg atccgatagc cgcccatcca
     3121 tcttggactg ccgaggtcgg gcggatacgc gcaactacgg ttggcgacgt caatttgtct
     3181 gagcgcggca cgagcgtagt ctgcacaata cccgggatcg gcggcccgag ctccacaagc
     3241 caccacaacg ctgagcatca ggccagcggt ggcagcatac aacctggccc tcatgcgggt
     3301 ttccagtctg ctgttggcgc gaatctcctg tagcaaactg aaatgaacgg gtggttacag
     3361 gacaccgttt cgaacgtcat gataatcggt cggccaatca accaaatcag gttagatacc
     3421 ccggttccaa cccccgtact aaccattgac aaactggcca tcattcctgg caaactgtcc
     3481 tcgccatccg gagatcctgt tgccgcacca aagcgcttga ccgagggctc tgcccctacg
     3541 atgtcttccg ccttccccgt cggactggtc cggccgggta cggcggagtt tggtcgatga
     3601 ccggtacggt tctcacatct cgcaaacatc tgcacgtgat cacctggggt tgccagatga
     3661 acgtgtatga cagcggccgg atgtccgacg tgctggcgcc gcttggctac gtcgcctcgg
     3721 acacccccga gggcgccgat atggtgatcc tcaacacctg ccatatccgc gacaaggccg
     3781 cggagaaggt gttctccgag ctcggccgtc tgcgccggct taaggaggcc accggtgggc
     3841 gcatgatcct ggcggttgcc gggtgcgtcg cgcaggccga gggcaaggaa attctgtcgc
     3901 gtgcgcccta cgtcgacatc gtcctgggtc cgcaaaccta tcaccggctg cctgaaatgg
     3961 tcgcgcaggc ttctcgggca ggcggtgccg tgatcgagac ggactttccc cccgaggaca
     4021 agttcgacca cctgccggaa cagtccgccc ctcaaggcgt caccgcgttc ctgacggtgc
     4081 aggagggttg cgataagttc tgcagttttt gcgtcgtgcc ctacacgcgc ggcgcggagc
     4141 agagccgtcc cgcggccggc atcctcgctg aagcaaggcg gctgatcgca cagggatcac
     4201 gggaaatcac gttactggga cagaatgtaa atgcgtggcg cggtgccgcg ccggatggcg
     4261 gcacctgggg tctcggcgcg ttgctccgcg cgatggccgc acttcccggg ttgttccgat
     4321 tgcgttacgc gacctcccac ccgcgcgaca tggacgatgc actgatcgag gcgcaccgcg
     4381 atctgcctgt gctgatgccg ttcctgcatt tgccggtgca gtctggctcc gaccgcgtcc
     4441 tgacggcgat gaaccgcaag cataccgcgg acgattacct gcggctggtc aaccggctgc
     4501 gtgctgcccg tcccggtctg gcgctgtcgt cggacttcat cgtcggccat ccgggagaaa
     4561 ccgaagcgga tttcgcggcg accctggaac ttgtgcggtc ggtcgggttc gctcaggcgt
     4621 acagcttcaa atattcgccg cggcccggga caccggccgc cggcgcgccc ggtcaggtgc
     4681 cggaagttga gaaagatcgc cgcctgcaaa tgctgcaagc gctgctgcgc gaacaacaaa
     4741 gtcagttcaa tgcggcctgt aacggggccg ttatggatgt gctgttcacc ggtcctggcc
     4801 gtcaccctgg tcagatcgtt ggacggtcac aatatcttca acccattcac atcaccggat
     4861 ctggcagcct catcggcgag gaacgggcgg tgcgaatccg tgacgttcat ccaaattcgt
     4921 tgtcgggaac ccttgtccag gagagcataa gcgcttgaca cagatcgccg gctcgctcgc
     4981 atccgcggcc aatccgacca atggcggtaa ggccatcacc gttcagttca acgacaatat
     5041 gctgctgcct ttgcttctgg gcgatcacga ccggcatttg gtccgcatcg agcaggcgct
     5101 tggcgtgcgg ctgtcctgcc gtggcaaccg ggtggcgatc gccggtgact cggcgcgggt
     5161 ggacgcggcg cagagcgcac tgcaagggct gtggcggcgg ctggaacgcg gcgagagtgt
     5221 cggccgtccg gatgttgagg cggcgatccg tatggtcgag atcgaaaccg atcctcggtt
     5281 gccgttgtcc gatttgccgg ccatccgcac ccgcaagggc gctgtggggc cgcgcagcgc
     5341 cggacaggtg gcgtatatgg aggcgctggc ctcgcacgag atggtgttcg gtgtcggacc
     5401 ggcaggaacc ggcaagacct atctcgcggt ggcgcaggcg gtggcgatgt tgcaggccgg
     5461 ccgggtggat cgcatcgtgc tgtcgcggcc ggccgttgaa gcgggcgagc gactgggctt
     5521 tttgccgggc gacatgaagg agaaggtcga tccttacctg cggccgttat acgacgcgct
     5581 gcatgacatg atgccggccg atcaggtgct gcgccgcatg accaacggcg agatcgaggt
     5641 tgcaccgttg gcgttcatgc ggggccgcac gctggcgcac tccttcgcca ttttggacga
     5701 ggcgcagaat accaccgccg tgcaaatgaa aatgtttctg acccggatgg gtgagggctc
     5761 gcacatggtg atcaccggtg acctgacgca ggtcgacctg ccgtcgggga tgcggtcggg
     5821 gctggccgat gcgctggata cgctggaggg cgtgcaaggg atcagcgtgg tgcggctgaa
     5881 caatcgcgat gtggtgcggc atccgttggt gggtcgaatc gtcgatgcgt acgaccagcg
     5941 ggcggcggca gaaggggata cgcggcggga ggctggggcg agggccggcg gcggcgactg
     6001 accaacattt aaacttagcg acgcccgggt caaaaagcac caagaatgcc agttctctga
     6061 acgcgccgct tattccgcca ccagagccgg ccacgggaca cgccttactt tgatttggtc
     6121 agcatgacgc atcgcctgcg ccatctcata cgccgcctgc atgtggtgcc acgtatccgc
     6181 accgccgcca aaagccttgt ccaggcggat cgccatttcc ggggaaatgc cacgacgctc
     6241 gtttaaaagt tccgacagag cgttgcgcga cacaccaagc gccttcgccg cgtccgtgac
     6301 ggtcagcccg agtggttcaa gacactcctg gcgaacaatc cggccaggat gcggagggtt
     6361 cttcatgggc attgggtcat tctcctaatg atattcgatc aggtccacgt caatcgcgtc
     6421 ggtgccttca aaacgccaga taatccgcca gttggcgcga accgtcaccg cccagaagcc
     6481 gcgtaaatca cctttcaatg ggtgcaatcg aaagcccgga atatccatct tgtcgggagt
     6541 ggttgccaca tccagccttg caagaatgtt ttctattttc tcgagcatgt ccggccggac
     6601 ttgcgctgct tcgccacgtt catagagccg cctcaggccg cgatgccgaa agctctttat
     6661 catgtcagag tgtaacctgt agcctatcgg atttcaacaa acaggtatgc gatcagagcc
     6721 gtcgccgcga gaggaaacac tggtcgacct cctcgagagc cgccaggcaa ggtgagcatg
     6781 acggcatgtc gaaggccggc tttgcgcggt ttgcttggcc cgggcgccac gccatcgtaa
     6841 gctacttctg ccgtggccga tgccaatggg cagccagggc attgaggtga cacccatgtc
     6901 ggcgaccaac gcgaaccctg ttacccgaaa tcgacccttg ccatcacgcc ccctgatcga
     6961 aggcccgtcc gcctggatcg gcgccgacct gcgttcgcgt gagtcagagt ggagctaccg
     7021 tctgacgccc accgaagttg ccgagatcga aaccgccgtc gcaacggtac gccacctcga
     7081 tctcgacatc gcagacattc gccggggaca cttcccgtta cccaccctcg gacccgtgct
     7141 ggaacggttg cgatccgaag tcctcaacgg ccgcggcttc gttttgttac gcggcatgcc
     7201 cgtcgaaaac cgcccaatcg ccgaaagcgc gatcgcctat tggggcgtcg gcacctattt
     7261 cggcagtgcc cgttcgcaaa acgccaaggg ccacttgctc gggcacatct acgatctcgg
     7321 tggcagcagt gcgaccgatc ccaccattcg cagctacgca acggcggagc ggcagaacta
     7381 ccatatcgat cgttgcgacg tcgtcgcact gctgtgcctg cggcgagcga agtccggcgg
     7441 gctgtcggcc atcgtcagtt cgatgacagt gcataacgtc atggcacaac gccgcccaga
     7501 cctgctggaa cgcctgtatc aatccttccc ggtcgaccgc cgcggtgagg tcccgccggg
     7561 aaaacagccg ttctacgaag ccccggtgtt caacgaacac aacggttatc tgtccgtgct
     7621 gtattcccgg ctgcatatcg gttccgcgca acggttcccc gaagcgcgca ggttgacgtc
     7681 cgaggactac gaagcgctcg acatgctggc cgagctggcc tccgaccccg acctgcggct
     7741 ggacatgacg ttcatgccgg gcgacatcca gttcttgcac aatcatacaa ttttgcacgc
     7801 ccgctcggaa tacgaggact ggcccgaggt cgaacgcaag cggcatttgt tacggttgtg
     7861 gctcgccccg cccaatgcaa ggccgctgcc gccggtgttt gccgaatgct acggtaacat
     7921 aacgatcggc gatcgcggag gtatcgtctg cgaaggcacg cggctgcacg cgccgctggt
     7981 gccaggctaa ctgacgccgg ccgacggcta ccgggcgcct acaaaatctg caatcgtggc
     8041 gacgacaaca gcagcaaaaa gggaggccga tcccatgccc accagcggaa ccaacgatct
     8101 tcgatcccac atttatctcg gcctcgccgg cgaaaccggg cgcggccgtc tcgtgcaatc
     8161 cggtttgtat cgcctcgccg acggcgacga cgattggcag ccaatccaaa atggccttcc
     8221 cgacgcgccg gcgatccgcg ccctggccgt gcacccgctg caccctgagg tgatcttcgc
     8281 cggcacacaa tccggtccct atcgcagcga cgatcgcggc gagcactggg aaaagatcga
     8341 cattgccgac cacggtctgc cggtctggtc gttcctgttc cacccgtacg atcccgatgt
     8401 catgttcgtc ggttacgaga actgtggaat ctaccgcagc gacgatgccg gcgagcgctg
     8461 gacgagactg ccggtcagcg tccgcttccc cgacatcacc acgaccgcgg gcgcgaaccc
     8521 ggccaaacgc gtgctgaaga tggatgccag cgtcgccgag cccgaccacc tctatgccgc
     8581 catcgaagtc ggcggcaccc tgcgctc
//
LOCUS       DATAVD010001231         2315 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1607121, whole genome shotgun sequence.
ACCESSION   DATAVD010001231 DATAVD010000000
VERSION     DATAVD010001231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1607121"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            303..392
                     /locus_tag="VHX39_23560"
     tRNA            303..392
                     /locus_tag="VHX39_23560"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:337..339,aa:Ser,seq:cga)
     gene            complement(458..931)
                     /locus_tag="VHX39_23565"
     CDS             complement(458..931)
                     /locus_tag="VHX39_23565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994162.1"
                     /translation="MAYLPVLWDHARSEILSEGDQDGCIGRVWIGYDSIFPVDYHLLV
                     EMHPTNQGMEFVFALLKGDRMTQTSEAIFDSAVANQIIPRWHRPRIRELLDSMTEKVV
                     RNCDRNAFFMAAYCAQLPEPALAKYAMLCEAFRRCGYDCLRSEPSPGKLLWQMNR"
     gene            complement(1402..>2315)
                     /locus_tag="VHX39_23570"
     CDS             complement(1402..>2315)
                     /locus_tag="VHX39_23570"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3994163.1"
                     /translation="DVHHHYTSPALLAMMRGRRTHQGFNEAWTLQKSLDAMDAAGVAT
                     AVVSTSDPGVFFGDYDQAKALARDCNEYQARMVADHKGRFGMFTTLPLPDVDNTLAEI
                     AYGMDTLKAQGVGMMTSYGTKYLGDPAFTPVMQELNRRKATVFVHPLQPACCTNVVAG
                     VPDVVVEYGTETSRTIASLLMSHTTIKFPDIRFIFSHGGGDVPYLTFRFSRMVGGDPV
                     LMKAEPGGAVPLIQKLYFDTAQAWNQYTLPSLTKLMPVDHIVFGSDFPAASPLDTVNG
                     LRAFGLSEDALGKIERHNALGILANFS"
BASE COUNT          437 a          730 c          676 g          472 t
ORIGIN      
        1 acctcggccc ccagcttgtc ctgataccat gccgcggttg cctcgggatc gggcgagcgc
       61 agatggatgt gttcccagtt gaatgtcgtc atgtttcccc ccaacggcct ggttccgggg
      121 cattaattca ccgcggcgcg gcttgggcaa ggggcgcggc ggtttccggt tctctggttt
      181 cgtccgttgg tggggtcgat ttctcggcga atccccacga cgcatttctg gcgcttgcat
      241 ccggggggtg taaccggcta ggtcacgcct ccgacacgcc aagcgcttgc gcttgtgtca
      301 ctggagaggt gccagagcgg tcgatcgggg cggtctcgaa aaccgttgtg cctttgcggg
      361 tacccagggt tcgaatccct gcctctccgc caaccacata acggcaaaac ccctgaatca
      421 tcgcgcgcgt gtggcttttc ctgccaccag cgtcgtttca gcggttcatt tgccagagca
      481 gctttcccgg actgggttcc gatcgaaggc aatcatatcc acaccgccgg aacgcctcac
      541 aaagcatcgc atattttgcc aatgccggct cgggcaattg agcgcagtag gcggccatga
      601 agaaggcgtt cctatcgcag ttccgaacga ccttctcggt catggagtcc agaagttccc
      661 gaattctcgg acgatgccat cttgggatga tctggtttgc gactgccgaa tcgaagatgg
      721 cctcggatgt ctgcgtcatg cggtcgcctt ttagaagggc gaacacaaac tccattccct
      781 ggttggtcgg gtgcatctcg accaaaagat gataatcgac cgggaatatc gaatcgtagc
      841 cgatccacac ccggccgatg cagccgtcct ggtctccttc agataaaatc tccgatcgag
      901 catggtccca gaggaccgga agataggcca tcgcctatca taatttgata attgacaaat
      961 tatccacagg aaatgggctt cgaggcgctt acaatcgagg cgcgatatca ttcggccaat
     1021 cgggagcgtt ccggcggatt gcggtcgcgc ttcggtctga cgatccgggt tcggcaattc
     1081 cggcctgagc cgcccctatc gccagtcgtc agtcccatcg cgggcagggt cgctgaatcg
     1141 ccgggcagcc acagtcttca gatcgtgcgg ctacacctgc ggatcagttg atatggcgcg
     1201 ctcacggtcc atggtttcgt tccgcaacca ttcttgcgac aaacggatct ctcgcctcgt
     1261 tacgtcaact cggcccccac gatgagggtc gcgttctcac gtcgaggcgc cgggcaacat
     1321 tcccttggcg acatcggccc ggttctcccc gcagccccag cacgggatca gcagagggaa
     1381 cccaaccgga gggccgatca atcagctaaa attcgccagt atgcccagcg cgttgtgccg
     1441 ctcgatcttg cccagcgcat cctcgctcag accgaacgcc cgcagcccgt tcaccgtgtc
     1501 cagcggcgac gccgccggga agtccgaacc gaagacgata tgatcgaccg gcatcagctt
     1561 ggtcagcgac ggcagcgtgt actggttcca ggcctgcgcg gtgtcgaaat acagtttctg
     1621 gatcaacggc accgcgccgc ccggttcggc cttcatcagc accggatcgc caccgaccat
     1681 ccgtgagaag cggaacgtca ggtacggcac gtcgccgccc ccatgcgaga agatgaagcg
     1741 tatatcggga aacttgatcg tggtatggct catcagcagg ctggcgatcg tgcgggacgt
     1801 ttcggttcca tactccacca ccacgtcggg cacccccgcg acaacgttgg tgcagcaggc
     1861 cggttgcagc ggatgcacga acaccgtggc cttgcggcga ttgagctcct gcatcaccgg
     1921 cgtgaacgcc ggatcgccga ggtatttggt gccgtagctg gtcatcatgc ccacgccctg
     1981 ggctttcagc gtgtccatcc cataggcgat ctcggccagg gtgttgtcga catccggcaa
     2041 cggcagcgtg gtgaacatgc cgaaccggcc cttgtggtcg gcgaccatgc gcgcctggta
     2101 ttcgttgcaa tccctggcaa gcgccttggc ctgatcgtag tcgccaaaaa acacaccggg
     2161 atcgctggtg gacaccaccg ccgtcgccac acccgccgca tccatcgcat cgagcgactt
     2221 ttgcaacgtc cacgcctcgt tgaacccttg atgggtgcgc cgtccgcgca tcatcgcaag
     2281 caacgcgggt gacgtgtagt ggtgatgcac gtcga
//
LOCUS       DATAVD010001232         2128 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1417811, whole genome shotgun sequence.
ACCESSION   DATAVD010001232 DATAVD010000000
VERSION     DATAVD010001232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2128
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1417811"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..789
                     /locus_tag="VHX39_23575"
     CDS             <1..789
                     /locus_tag="VHX39_23575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HEX3994164.1"
                     /translation="GYSDMAIGIARMFNITLPLNFNSPYKAASIIDYWQRWHMSLTRY
                     LTQYVYTPFAVLLVRRRSARGPPINRAAQQTVQGFCEMIALPLVVTMTLAGIWHGSGA
                     QFLVFGLLHAAYLCVNRAWRLRFGGASPSRSRHIANVLLTYLCVLVASVFFRAPSVSS
                     AVSMLSGMAGLHGTGFVPGFGSIVQALTSLEWFGAMYVIVWAMPNTQQIFADLAPALE
                     RVPPLASARLRFGFDIPWAVVIGSALVFGVLSIGGSSEFLYFQF"
     gene            1121..1882
                     /locus_tag="VHX39_23580"
     CDS             1121..1882
                     /locus_tag="VHX39_23580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994165.1"
                     /translation="MIIGHGPHTYNDPVKLWDFDAPYEFLDLDQRQEIRRVAAQSDDV
                     AALQENPVDGVPVGLLDRAFAIHFPPLYFASLWQSGIALRWLQNRQWAQDLIKARGHC
                     LFGEANGSSKLSVETEMQGFKPFRLMDYYLSRTLTLLEQRGVNVLYLTPPLNQSTFDH
                     IKPDVAPEFVDYLQAKARTLNHFHVAENLVTCWPDEDFGDDGHLNELGARKYSAELNE
                     FLTHLMAGGAVGELPNHCQHDAVSAAASGDAIDHK"
     gene            complement(1907..>2128)
                     /locus_tag="VHX39_23585"
     CDS             complement(1907..>2128)
                     /locus_tag="VHX39_23585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019646655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HEX3994166.1"
                     /translation="LDPAFAPGTGTPEVGGLASWQAQVILRGLRGVRFVGMDVVEVAP
                     AYDTAEITALAAATVVWEYLALVSDTRSS"
BASE COUNT          402 a          637 c          618 g          471 t
ORIGIN      
        1 ggctattccg atatggcgat cgggatcgcg cggatgttca acatcacctt gccgctgaat
       61 ttcaactcgc catacaaggc agcaagcatc atcgactact ggcagcgttg gcacatgagc
      121 ctgacgcggt acctcaccca atacgtctac acgccctttg cggtgctgct ggtgcggcgg
      181 cggagcgcgc gaggcccgcc aatcaaccgg gcggcgcagc agaccgtgca aggcttttgc
      241 gaaatgatcg cactgccgct cgtcgtgacc atgacactcg cggggatctg gcacgggagc
      301 ggcgcgcagt tcctggtctt cggcctgctc catgctgcgt atctctgcgt taatcgcgcc
      361 tggagattgc ggttcggcgg agccagcccc tcgaggtcac gccacattgc gaacgtgctg
      421 ctcacctatt tgtgcgtttt ggtggcgtcg gtgtttttcc gcgcaccttc agtctcgagc
      481 gcggtgtcca tgctaagtgg catggccggc ctgcatggca cggggttcgt cccgggtttc
      541 ggatccatag tacaggcgct gaccagtctg gaatggttcg gcgccatgta tgtcatcgtc
      601 tgggccatgc cgaacacgca gcaaattttc gcggacctgg cgcctgccct ggaacgagtc
      661 ccgccattgg catccgcccg cctgcggttt ggattcgaca tcccatgggc cgtcgttatc
      721 ggaagcgcgc ttgttttcgg agtattgtcg attggtggtt ccagtgagtt cctctatttc
      781 cagttctgac atctccccaa cccgcatctc tccagcacgt tatttgcgat gggccgccgg
      841 ctccgcggtc gtgggatttg cattggtctg gctttatgtc gcgtcatgtc cgatggcgta
      901 tcttaccgtg gactacgtgg cttcgcgtgt gcaaaagcaa cggctcgcgg actgcgatct
      961 tggcgatgtc gcgatatttg gcgactcccg cgtcgcggcc gcggtcgagc ctgacatcat
     1021 gtcaattcgg gtgtcgaatt tcggcctgca ggcgaccacc ccggtggaga cgtggtttgc
     1081 tgttcagcag gcaatgcgct gtcccgcttt gccccgatgg gtgatcatcg gtcacggccc
     1141 tcatacgtac aacgacccgg tgaaactttg ggatttcgac gcgccgtatg agttcctcga
     1201 tctggaccag cgtcaggaga tccgacgtgt cgcagcccaa tcggacgacg ttgcggcatt
     1261 gcaagaaaac ccggttgacg gtgtgcccgt tggcctgctc gaccgggcgt tcgccatcca
     1321 ctttccaccg ttgtacttcg ccagcttgtg gcaatccgga atcgcattgc gatggttgca
     1381 aaaccggcaa tgggcacagg acctgattaa ggcccgaggg cattgtttgt ttggcgaagc
     1441 gaacggctcc agcaaacttt cggtggagac agaaatgcag ggcttcaagc cattccggct
     1501 gatggattat tacttatcca ggacattgac actgctggaa cagcgtggcg tcaacgtgct
     1561 ttatctcacg ccgccattaa accagagcac attcgaccat atcaaaccgg acgtcgcgcc
     1621 ggagtttgtt gattacttgc aggcgaaggc tcggaccctc aatcatttcc atgtcgctga
     1681 aaacctggtc acatgctggc cagatgaaga tttcggcgac gacgggcatc tgaacgaact
     1741 cggagcgcgt aagtacagcg ccgaactgaa tgagttcctc acgcatctca tggcgggcgg
     1801 tgccgtcggg gagctaccca atcactgtca acacgatgca gtatctgctg cggccagcgg
     1861 agatgccatt gaccataagt aatgacgtgt gccgtcccgt cattggtcac gaacttcgtg
     1921 tatcggagac caacgcaagg tattcccaca ccaccgtcgc cgccgcgagt gcagtaattt
     1981 ccgcggtgtc ataagctggc gcaacctcga ccacgtccat gccaacgaac cgcacgcctc
     2041 gcaaaccgcg caaaatcacc tgggcctgcc aactggcgag tccgccaacc tccggtgtac
     2101 cggtacccgg cgcgaaagcc gggtccaa
//
LOCUS       DATAVD010001233         1592 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_865145, whole genome shotgun sequence.
ACCESSION   DATAVD010001233 DATAVD010000000
VERSION     DATAVD010001233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_865145"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..>1592
                     /locus_tag="VHX39_23590"
     CDS             78..>1592
                     /locus_tag="VHX39_23590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX3994167.1"
                     /translation="MIESVLHRIRIEPDLREMAANPFLLGLLVRVLSRVGDGMAPLRT
                     LADVYRQVTVWVKDQHNQFQGDDAKLTADHMAGLRALSHRLLFGPERPRYLFGRQELS
                     GSMPAGLDEPVCRSRFVNRTDPVFDEYAFLHATLQEYFAAAHADSLAAPELDAFLDRA
                     FRSCSRLIVLELLAGQHGVAAARCRARAAAWLNARDRFQQVLLRVARLATAGRWSDND
                     LPVLVEGLRNELWGEIQSNRNMGLTKLAVEALAELDPTDLARRARTATGLDNWAIQCI
                     VDSVPPSIAREERLDELLSGEWRDYAGLDARGGATEKDIDAIRAVLDDPNCSEEDLRV
                     AIIHAAAAKDGGAVPGLLKLLRDDHPYPDIQENVIDSLGMIAGREAVDALVGVVLGKP
                     HLSTDAVAVAVAVLRHSGHNKKALDPVGRDRLARRLAVLAPDAPGPEPILQALEGCPL
                     REGAAVIEQIAQQSAAPAGVRSAAVRALTGVMDRSRLQRFVGTIASEPVGEVVDA"
BASE COUNT          293 a          473 c          527 g          299 t
ORIGIN      
        1 accggatcgc cgggctggcg gaacgctccc gcgatgagtt ggtgcgaaag ctcctcacgg
       61 cccaaggaca ccctgaattg atcgaatcgg tcttgcaccg catccgcatc gaaccggatt
      121 tgcgggaaat ggccgcgaac cctttcctcc ttgggttgct cgtgcgcgtc ctgtcacgcg
      181 tcggcgacgg catggctccg ctacggacgc tcgcggatgt ttaccgccaa gtcacggttt
      241 gggtgaagga ccaacataac cagttccaag gcgatgacgc caaacttacc gcggatcaca
      301 tggcgggact ccgcgctctg tctcaccgcc tgttatttgg tccggaacgc ccacgatatc
      361 tcttcggacg gcaggaattg agtggaagca tgccggcagg gttggacgaa ccggtatgcc
      421 gaagccggtt cgtaaaccga accgatcccg tatttgacga atacgccttc ctccacgcca
      481 ccctgcaaga gtatttcgca gccgcacacg cggattcgct ggctgcgccg gaactcgatg
      541 cgttcctcga ccgcgcgttt cgatcctgta gcagactgat cgtgcttgag ttgctcgccg
      601 gacagcacgg cgtggcggcc gcccggtgcc gtgcgcgcgc cgccgcatgg ctcaatgcca
      661 gggaccggtt tcaacaagtg ctgctgcggg ttgcccgtct cgccaccgca gggcggtggt
      721 cggataatga tctgccggtt ctcgtggagg gattgcggaa tgaactttgg ggcgagatcc
      781 agtcgaatcg caatatggga ttgaccaagc tagccgtaga agccctcgca gagctggacc
      841 cgacggacct tgcccggagg gcgcggacag ccacgggact cgacaattgg gcgatccagt
      901 gcatcgttga ttccgtgccg ccatcaatcg cccgcgaaga acggctagac gagctattgt
      961 ccggcgagtg gcgagactat gcgggtctcg atgcccgcgg cggggcaacc gaaaaagaca
     1021 tcgatgccat ccgtgcggtg ctggacgatc cgaattgttc agaagaggat ctgcgggtcg
     1081 cgatcatcca cgcggcggcg gccaaagatg gcggcgccgt tcccgggctg ttgaaattgc
     1141 tgcgtgacga tcacccatat ccggacattc aggagaatgt catcgatagc cttggtatga
     1201 tcgccggacg cgaggcggtc gatgccttgg tgggcgtcgt tctcggaaag ccgcatttgt
     1261 ccaccgacgc ggtggcggtg gcagttgccg tgctcaggca cagtggacat aacaagaaag
     1321 cgctcgatcc agtgggccgg gaccggcttg cgcgccgctt ggccgtgctt gcgcctgacg
     1381 cgcccggacc ggagcccatt ctgcaagcgc tggaagggtg tccgctccga gagggggccg
     1441 ccgtgattga gcagatcgcg caacagagtg cggcgccggc gggcgttcga tcggcggctg
     1501 tccgggcatt gacgggtgta atggatcgct cgcggctcca gcggttcgtc ggcacgattg
     1561 caagtgaacc ggtcggggaa gtagtcgacg ct
//
LOCUS       DATAVD010001234         2300 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3467729, whole genome shotgun sequence.
ACCESSION   DATAVD010001234 DATAVD010000000
VERSION     DATAVD010001234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2300
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3467729"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            155..>2300
                     /locus_tag="VHX39_23595"
     CDS             155..>2300
                     /locus_tag="VHX39_23595"
                     /inference="COORDINATES: protein motif:HMM:NF025214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3994168.1"
                     /translation="MTDSATAFAAALAHHEAGRLQQAETIYHNILASDPDHAESLHLL
                     GLITAQQGAPAGVDMIRRAIDLAPGRAPHHNSLAAALRMFGRDAEAVAEYRTAAALRP
                     GSAEIHNNLATVLNVLGCQEEAIEEYRRAAARAPGVAEIWYNLASALAESGQHEEVED
                     CFRRAIRLRPAFGNALANYGRWLITRARWLEAEVWLNEAVRLEPTDARNWNNLGIVRQ
                     EIGRLADAEACYRRAIACEPAMADAHYNLGCLLTGHGRTDDALECHRSAIAADPLHGA
                     ARLALCVAQLPILYTTTVEVEVRRSRYLAALNQLATAVTAPPVAHAVAAAIGTSQPFF
                     LPYQGQNDREPQAKYGRLVCRLLAKADPPAPLANHPIAGERIRVGIVSGFFLDHTIFR
                     LFLGSWLTEFDRDRFELTAFHTGRASDAVTERCAQSGSRFVRGLSSPTAWRASVSETL
                     PHVLLYPEIGMDPVAPHLAAQRLAPVQCVAWGHPETSGLPTMDYFLSTDLMEPSDGAS
                     HYTEQLVRLPGLGLHYTAQEQPTVPLDRETLGLPQEVPIYWSGQALYKYLPQYDCIYP
                     QIAAAVGVCRFIFIGFAKSDAVTTAFRERLCRAFAAFGLDAEQYCVILPPMPQQQFIA
                     AVGLADVILDTPGWSGGRSTLDCLSQNPAIVTCPGPLMRGRHTAAILRQVGCEATIAG
                     SLDEYVAIAARLGLDPAWRTQVRAKVAEGKHRV"
BASE COUNT          415 a          746 c          723 g          416 t
ORIGIN      
        1 gttaaagtac gacgtgcagt ctgcgaagat gacataccat ttgccatgag gtctggcctt
       61 tcggtgttaa cgccaacacg tcaccgcgcg tgttttggcg accgccggtc gccgaacgaa
      121 acggcggacc gtaacgacga aacggcgatc tgtcatgacg gatagtgcaa cagcttttgc
      181 cgctgcactg gcgcaccatg aggcaggccg gctccagcag gcggagacta tttaccacaa
      241 catccttgcc agcgatccgg accacgccga aagcctgcac ctgcttggcc ttatcactgc
      301 tcagcaaggc gcgccggcgg gcgtggacat gatcaggagg gcaatcgatc tcgcgccggg
      361 acgcgcgccg caccataaca gtcttgctgc tgcgctccgc atgtttggcc gcgacgccga
      421 ggcggttgcc gagtaccgta ccgccgccgc gctgcgcccg ggttcagcag aaatccacaa
      481 taaccttgcg accgtcctga acgtattagg atgccaggaa gaagcgatag aggaataccg
      541 ccgcgccgcc gcccgcgcgc ctggcgtcgc ggaaatctgg tacaacctgg ccagcgcgct
      601 ggccgaatca ggccagcacg aggaagtcga ggattgcttc cgccgtgcca tcaggctgcg
      661 gcccgccttc ggcaatgctc ttgccaacta cgggcgctgg ctgatcaccc gagctcgctg
      721 gctcgaggca gaggtttggc tgaacgaagc ggttcgcctg gagcccacag atgctcgaaa
      781 ttggaacaac ctcggcatcg tgcggcagga aatcggccgc ctggcggatg ccgaggcgtg
      841 ttatcggcgc gccatcgcgt gcgaaccggc catggcggat gcgcactaca atctcggctg
      901 ccttttgaca ggtcatggcc gcaccgatga cgcattggaa tgccaccggt cagcgatcgc
      961 ggccgacccg ctgcatggtg ccgcaaggct cgcactttgc gtggcacaac tgccgatcct
     1021 ctacaccacg actgtggagg tcgaggttcg acggtcgcgc tatctggcgg cgttgaacca
     1081 acttgccaca gcagtgacgg cacccccggt ggcgcacgcg gtggcggccg caatcggcac
     1141 gtcgcagcca ttctttctac cataccaggg gcaaaacgac cgcgagccac aggccaagta
     1201 cggccggctg gtctgccgcc tgctggccaa agccgaccca cccgcaccgc tggcgaacca
     1261 cccgatcgcg ggcgagcgca tccgggtcgg catcgtgagc gggttcttcc tggaccacac
     1321 catcttccgc ctctttctgg ggagttggtt gacggaattc gatcgcgacc gtttcgaact
     1381 gactgcattc cacaccggcc gcgccagcga tgccgtgacc gaacgatgcg cccaatcggg
     1441 cagtcggttc gtgcgcggat tgagttcccc gactgcgtgg cgcgcctcgg tgtccgaaac
     1501 attgccgcat gtcctgttat atccggagat cgggatggac ccggttgccc cacatctggc
     1561 ggcacagcgg ctcgcgccgg tacagtgcgt ggcctggggg catcccgaaa cctccggtct
     1621 gccgacgatg gactactttc tttccacaga cctgatggaa ccttcggacg gtgcatcaca
     1681 ctacaccgag caactcgtac ggttgcccgg cctgggcctg cactacacag cccaggagca
     1741 accgacagtt cccctggatc gcgagaccct gggtctgccc caggaggttc cgatctattg
     1801 gtcgggtcag gctctctaca aatacttgcc ccaatatgac tgcatctacc cgcagattgc
     1861 cgccgcagtc ggcgtttgcc ggttcatctt catcggcttc gccaaaagtg atgcggtcac
     1921 gacggcgttc cgcgagcgat tgtgccgcgc gtttgccgcg ttcggtctgg atgccgaaca
     1981 gtattgcgtc attctgccgc cgatgccgca gcagcagttc atcgcggcgg tggggttggc
     2041 ggacgtcatt ctcgacaccc cgggctggtc gggcggccgg tccacgcttg actgcctgag
     2101 tcaaaacccg gcgatcgtga cctgcccagg acctttgatg cgcggccggc atacggcggc
     2161 gatcctccgc caggtcgggt gcgaagcgac gatcgcgggt tcgctcgacg agtacgtggc
     2221 gattgcggcg cggctcggac tggatcccgc gtggcgaacg caggtccggg cgaaagtggc
     2281 ggagggcaag catcgggttt
//
LOCUS       DATAVD010001235         2029 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3279461, whole genome shotgun sequence.
ACCESSION   DATAVD010001235 DATAVD010000000
VERSION     DATAVD010001235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3279461"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..116)
                     /locus_tag="VHX39_23600"
     tRNA            complement(40..116)
                     /locus_tag="VHX39_23600"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(80..82),aa:Pro,seq:tgg)
     gene            complement(333..809)
                     /locus_tag="VHX39_23605"
     CDS             complement(333..809)
                     /locus_tag="VHX39_23605"
                     /inference="COORDINATES: protein motif:HMM:NF014678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HEX3994169.1"
                     /translation="MMIRVVQAAPVAFLAAALLVAGFVVFPVRAAGNGTLEIVSASGV
                     HAFTVELATNDAERERGLMYRKSMPQGHGMLFDFQHEQPLSFWMHNTYIPLDMIFIRG
                     DGRIAHIVENATPMSDALIPSTVPVRAVLEVIAGTVRDLGIADGDKVINPIFGNAR"
     gene            complement(815..1411)
                     /locus_tag="VHX39_23610"
     CDS             complement(815..1411)
                     /locus_tag="VHX39_23610"
                     /inference="COORDINATES: protein motif:HMM:NF012534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEX3994170.1"
                     /translation="MSSDGIEPKTADSGFVPDVDLGNDTAATIIEMAGVIKWFDVAKG
                     YGFIIPDNGMADVLLHVTCLRRDGYQTAYEGARVVCEVLARPKGLQVFRVISMDESTA
                     IHPAQMPPPRTHVTVAPTSSLERAQVKWFNRLRGFGFLTRGEGTPDIFVHMETLRRFG
                     LTELRPGQFVLVRFGPGPKGLMAAEVRPESGPLGLTSH"
     gene            complement(1565..>2029)
                     /locus_tag="VHX39_23615"
     CDS             complement(1565..>2029)
                     /locus_tag="VHX39_23615"
                     /EC_number="2.3.1.286"
                     /inference="COORDINATES: protein motif:HMM:NF014228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sir2 family NAD-dependent protein deacetylase"
                     /protein_id="HEX3994171.1"
                     /translation="PALITQNIDNLHQDSGFAADHVVELHGNTTFATCLDCATRYDLS
                     WVRERMDAGNGCAPDCARCGGFIKTATISFGQAMPDAAMQRAQDLALGCDLFLAIGSS
                     LVVWPAAGFPLMAKRNGARLAIINREATEFDDIADLVVRQDIGTVLEPFIVH"
BASE COUNT          414 a          643 c          632 g          340 t
ORIGIN      
        1 caaagtcaga atcacattga gcgaaatcaa gggcttggct ggtcggggca gcaggattcg
       61 aacctgcgac ctgtagtacc caaaactacc gcgctaccag gctgcgccat accccgccgg
      121 tcgcgaccct ggatacataa tacgccctgc cccagcaagc cagcctgcgc cgctgctgcg
      181 ccgaacctga tcgcagtgct atgtagcgcg cggtaccgaa gccgacatga ctccctctcc
      241 ccgtggggga aagggtcatg gtgagggggt tcggacctca caggacaatg tccagcgccc
      301 gagccttaac tgcgctcaca ataatgaaag gtctaccgcg cgttgccgaa gatcggattg
      361 atgaccttgt caccgtcggc gatgccgagg tcgcgcacag tgccggcgat cacctccagc
      421 accgcccgca ccggaactgt cgatgggatc agcgcgtccg acatcggcgt ggcgttctcc
      481 acgatgtggg cgatgcgccc atctccgcgg atgaagatca tgtcgagcgg gatgtaggtg
      541 ttgtgcatcc agaacgagag cggctgctcg tgctggaagt cgaacagcat gccgtgaccc
      601 tgcggcatcg acttgcgata catcaggccg cgctcgcgtt cggcgtcgtt ggtggcaagt
      661 tcgacggtaa aggcatgaac gccggaagcg ctgacaatct caagcgtgcc gttgccggcg
      721 gcccgcaccg ggaacacgac aaagccggca accagcaagg cagcggcaag gaacgcgacc
      781 ggcgccgcct gcacaacgcg gatcatcatt gcagctagtg ggaggtgagg ccgagcggcc
      841 cgctctcggg ccggacttcc gccgccatca ggcctttcgg gcccggtcca aaccggacca
      901 gcacgaactg gccggggcgc aattcggtca ggccgaaccg acgcagcgtt tccatgtgga
      961 cgaaaatatc cggcgtccct tccccacgtg tcaggaagcc gaaaccacga agccgattga
     1021 accattttac ctgtgcccgt tcgagactgc tggtcggggc cacagtaaca tgggtccgcg
     1081 gcggcggcat ctgcgccgga tggatggcgg tggattcgtc catcgagatg acgcggaaga
     1141 cctgcaggcc cttcggccgc gccagcactt cgcacaccac gcgcgcgcct tcataggcag
     1201 tctggtagcc atcgcggcgc agacaggtga cgtgcagcag cacgtcggcc atgccgttat
     1261 cgggaatgat gaagccgtaa cctttggcga catcaaacca tttgatgacg cccgccatct
     1321 cgatgatggt cgcggccgta tcgttgccga gatcgacatc gggaacgaat cccgagtccg
     1381 ctgtttttgg ttcgatgccg tccgacgaca tgacgcctcg ccgccgtatt cctcgcgccc
     1441 cccgcgggcg ctgcacgaat ctcttgattc gaggataaca ttcgcgaccc gacgcgaaag
     1501 cacaaaaatg caacactgcg ggaaaaccgt aacgcgcctg tgcaaaaagt ggattgaagg
     1561 tcgctcaatg gacaatgaac ggttcgagca cggtgccgat atcctgtcgc acgaccaggt
     1621 cggcgatgtc atcgaactcg gtggcctcgc gattgatgat cgcaagccgc gcgccattgc
     1681 gtttagccat caacgggaat cccgcggccg gccacaccac cagcgatgag ccgatcgcca
     1741 gaaacaggtc gcagcccagc gcgagatcct gggcgcgctg cattgccgca tcgggcatgg
     1801 cctggccgaa cgagatcgtc gcggtcttga tgaagccgcc gcagcgcgcg cagtccggcg
     1861 cgcagccgtt gccggcgtcc atgcgctcac gcacccaaga caagtcgtag cgcgtcgcgc
     1921 agtcgaggca ggtcgcgaac gtggtgttgc catgcagctc gaccacgtgg tcggcggcaa
     1981 agccggagtc ctggtgcagg ttatcgatgt tctgcgtgat caacgccgg
//
LOCUS       DATAVD010001236         2481 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2909565, whole genome shotgun sequence.
ACCESSION   DATAVD010001236 DATAVD010000000
VERSION     DATAVD010001236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2481
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2909565"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..477
                     /locus_tag="VHX39_23620"
     CDS             <1..477
                     /locus_tag="VHX39_23620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016811 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEX3994172.1"
                     /translation="YGACTSIVPREFGGHMDLKELVAGTTLYLPVWAEGALFSCGDGH
                     GVQGDGEVCINALEICLTGTFTLVLHKGGGERNPLLTYPRAETPTHFITMGMHEDLDL
                     AMKQALRQMISFITGRTNLSKEQAYQFCSLAVDFHVTQTVNGEKGVHGMLRKGLLF"
     gene            598..1227
                     /locus_tag="VHX39_23625"
     CDS             598..1227
                     /locus_tag="VHX39_23625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GcrA family cell cycle regulator"
                     /protein_id="HEX3994173.1"
                     /translation="MEWSDDVIGQLRALWDEGHSTAEIGRRLGVTKNAIVGKAHRLDL
                     PARPSPIRRDPDAAPVRRTPVRRVEGPTLPPLPSAVADGDAGLPVFGDTPLTVRRPDF
                     GPVLMPGGVAPATTPRPPVMARPAVATPSMPRPMVHGTRAVAVPPPRPVAAAPRPYGR
                     VVTCCWPIGEPGTREFHFCDVPSEPGRPYCEEHVKVAYVKVRDRREDAA"
     gene            1405..>2481
                     /locus_tag="VHX39_23630"
     CDS             1405..>2481
                     /locus_tag="VHX39_23630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007006102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEX3994174.1"
                     /translation="MAAGVDAPVKHSPSTAAGRWLAVLGVVYGDIGTSPLYALKSSMQ
                     VFNGVPGGEVEILGILSLFFWSLVLVVTVKYVMLVMRADNHGEGGILALMALAQRVAV
                     NTSMRNTLAMVGIVGACLFFGDGVITPAISVLSAVEGLEVAAPTLQEYVLPISVGVII
                     ALFAMQYRGTHSVGRVFGPIMALWFIVLALLGIGQIIHRPDVLMAISPWHAVKLCVVY
                     KYLAFVVLGAVVLCVTGAEALYADMGHFGPIPIRQSWLFVVLPSLVLCYFGQGAMLLR
                     DPASVQNPFFLMAPEWSRLALVILATAATVIASQAVISGAYSATRQCMQLGFLPRLTV
                     RHTSNMEEGQIYVPQVNMALMIGVL"
BASE COUNT          393 a          733 c          843 g          512 t
ORIGIN      
        1 tacggcgcct gtacctcgat cgtgccgcgc gagttcggcg gccacatgga tctgaaggaa
       61 ctggtcgccg gcacgacgtt gtacctgccg gtttgggccg agggtgcgct gttttcctgc
      121 ggtgacggtc acggcgtgca gggcgatggc gaggtctgca tcaatgcgtt ggagatttgc
      181 ctgaccggca cgttcaccct cgtgctgcac aaaggcggcg gcgaacggaa cccgctgctg
      241 acttacccgc gggccgagac gccgacgcat ttcatcacca tggggatgca cgaggatctc
      301 gacctcgcca tgaagcaggc gctgcggcag atgatttcct tcatcaccgg gcgcaccaat
      361 ctgtcgaagg agcaggccta tcagttctgc tcgctggcgg tggatttcca cgtcacgcag
      421 acggtgaacg gggaaaaggg tgtgcacggg atgcttcgga aggggctgct gttctagatt
      481 ttgtggtaga ggactcggtt gtccacaact ttttgtggtc ggaccgattt aggccattga
      541 ggccggcgcc cctgcgcgat actctatttt gtgtccaaac cgcaggggga tcacaatatg
      601 gagtggagcg acgacgtaat cggccaattg cgcgccctct gggatgaggg tcattccact
      661 gccgaaattg gtcggcggtt gggtgtgacg aaaaatgcca tcgtcggaaa ggcgcaccgg
      721 ctggatttgc cggctcgtcc gtcgcccatt cggcgcgatc ccgacgctgc gccggtgcgg
      781 cggaccccgg tacggcgggt cgagggaccg acgctgccgc cgctgccaag cgcggttgct
      841 gacggggatg cgggactgcc ggtctttggc gacacgccgc tgacggtacg gcggcccgac
      901 tttggcccag tactcatgcc gggcggggtc gcacccgcga cgacgcctcg gccaccggtg
      961 atggcgagac cggccgttgc cacgccgtca atgccgcggc cgatggtgca cggaacacgc
     1021 gcggttgccg ttcctcctcc gaggccggta gcggctgctc caaggccgta tggtcgtgtg
     1081 gtcacctgct gctggccgat cggcgagccc ggcaccagag agttccactt ctgcgacgtg
     1141 ccgtcggagc caggccggcc ctattgcgag gaacacgtga aggtcgctta cgtcaaagtg
     1201 cgcgaccgcc gtgaggacgc cgcctgacgg gctcgaacgg ttgggggcaa agcccaggcg
     1261 gctttccact ggcaaacaat cgcccccttt gacagtcgcc agccgcgagc gtaagcgacg
     1321 ccgcccgatc cagggtggtc gccggcgagg tgtgcgtgac atgaagcagg gtgcgctccg
     1381 ggccatgtcg cgaggttcgg cttgatcgcc gccggcgtcg acgctccggt taaacattca
     1441 ccgtcgaccg ccgcgggccg gtggctcgcc gttctcggcg tcgtatacgg cgacatcggc
     1501 accagcccac tgtacgcgct caagtcgagc atgcaggtgt tcaacggcgt gccgggcggc
     1561 gaagtcgaaa tcctcgggat tctgtcgctg tttttctggt cgctcgtgct ggtcgtcaca
     1621 gtcaagtacg tgatgctggt gatgcgtgcc gacaaccacg gcgaaggcgg catcctggcg
     1681 ctgatggccc tggcgcagcg ggtcgcagtc aacacgtcga tgcgcaacac gctcgccatg
     1741 gtcggcatcg tcggtgcctg cctgttcttc ggcgacggcg tcattacgcc agcgatttca
     1801 gtgctgtccg ccgtggaagg gttggaggtg gcggcgccga cgttgcagga atacgtcctg
     1861 cccatcagcg ttggtgtgat catcgcgctg ttcgcgatgc aatatcgcgg cacccacagt
     1921 gtcggacgcg tattcgggcc gatcatggcg ttatggttta ttgtcctggc gttgctgggc
     1981 attggccaga tcatccaccg accggacgtg ctgatggcga tttcgccctg gcatgcggtc
     2041 aaactgtgtg tcgtttacaa atatctggcg tttgtcgtcc ttggtgcggt cgtgctgtgc
     2101 gtgaccggag ccgaagccct ctatgccgat atgggtcatt ttggtcccat accaattcgg
     2161 caaagttggt tgtttgtcgt gctgcccagt ttggtgctgt gttattttgg tcagggcgcg
     2221 atgctgctgc gggacccggc gtcggtgcag aacccgttct tcctgatggc acctgagtgg
     2281 agccggctcg cgctggtcat tctggcgacc gccgccacgg tgatcgccag tcaggcggtg
     2341 atctcgggcg cctattccgc gacacggcaa tgcatgcagc tggggttttt gccgcggctg
     2401 acggtgcggc acacctcgaa catggaggag ggccagatct acgtcccgca ggtcaacatg
     2461 gctttgatga tcggtgtgtt g
//
LOCUS       DATAVD010001237         3336 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2724045, whole genome shotgun sequence.
ACCESSION   DATAVD010001237 DATAVD010000000
VERSION     DATAVD010001237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3336
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2724045"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            351..545
                     /locus_tag="VHX39_23635"
     CDS             351..545
                     /locus_tag="VHX39_23635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994175.1"
                     /translation="MSSFISHVIGPEQLIFQCPGAVSILLAMNNALHQGGPSALQSRA
                     VVLLLGDAAIALAANYGQQE"
     gene            586..2706
                     /gene="tkt"
                     /locus_tag="VHX39_23640"
     CDS             586..2706
                     /gene="tkt"
                     /locus_tag="VHX39_23640"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003617296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEX3994176.1"
                     /translation="MLLESHGRIDVNHATSAETSPVLPGDGIDQIAINTIRTLSMDAV
                     QKARSGHPGTPMGMAPVGYTLWQHALRYDPADPHWPNRDRFVLSVGHASMLLYSLLHI
                     ARVASDVEHKDKGPYAVTLDDIKQFRQLSSVTPGHPEYRLTSGVETTTGPLAQGVSNS
                     VGMAMAQRFLANRYNKPGFPLFDYHVYALCGDGCMMEGVSNEAASLAGHLKLGNLTWI
                     YDSNHITIEGATSLAFGDDVGARLGAMGWHVIHVDDANNTVAVAKALDEAKAFTDAPT
                     IIVVHSIIGFGAPKKAGTREAHGEPLGDEEIKGAKRHYGWPEDSQFLVPDGVYERFSE
                     VMGARGAEARHQWMDLLTKYREQYPDLARELDMIDRHELPEDWDSEIPVFPADAKGLA
                     SRDSSQKVLNAIAKHVPWIIGGAADLAPSTKSNLTFDGAGSFQPDNYGGRNLHFGIRE
                     HVMGSACNGIALSGMRAYGSGFLIFSDYMKAPIRLSAIMELPVIYIFTHDSIGVGEDG
                     PTHQPIEQLAALRAIPGMIVLRPADANEVAEAWRVVMKLTRHPACLILSRQALPTIDR
                     SKFASAAGTAKGAYVVADCEGTPSVILMGTGSELALCMGAYETLTAEGVKARVVSMPS
                     WELFEHQDQAYRDEVLPPSVKGRVAVEQAATLGWDRYIGMGGGMIGMHTFGASAPLAA
                     LQNQFGFTPEAVLEEARKQARRTS"
     gene            2824..3122
                     /locus_tag="VHX39_23645"
                     /pseudo
     CDS             2824..3122
                     /locus_tag="VHX39_23645"
                     /inference="COORDINATES: protein motif:HMM:NF013356.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
BASE COUNT          632 a         1072 c         1060 g          572 t
ORIGIN      
        1 ccataaaccg cagaaaagtg tggaggggat tgtctgccgt catcgcgggt ctccgtcatc
       61 acgtttgcgt cgacatccac cagcccgcca gcgatggttg gtgagaggcg gcatcgttcc
      121 agcgtgccac gaggagcgca ccgacccgaa gcgccgctgt ttgaagcagc ctcctgtgag
      181 aagcttcacc gtttggtgtc atcaggattc accgacgtgg acatcgtgta ccgcctatta
      241 agcggcccag ggcgcttagg caggccacat cagtcgcatc caacctcttc agtcgcacaa
      301 tatgcttcgg gacgggtgaa gtccgcggcg agacgtgctg aggatggtga atgtcatcat
      361 tcatctctca cgtaatcgga cccgaacagt tgattttcca gtgcccagga gcagtctcga
      421 ttctgctggc tatgaataat gccttgcatc aaggcggccc gtctgctctg cagtcacggg
      481 cggtggtgct gttacttgga gacgctgcca tcgccctggc ggcgaactac ggacagcagg
      541 agtgactaac ttgagcaacc gtcggaatgg cgtcggacga aaccgatgct tctggaaagc
      601 catgggagaa tcgatgtgaa ccacgccact tcagccgaaa cgtccccagt gttgcctggc
      661 gacggcatcg accaaatcgc catcaacaca atccggacct tgtccatgga cgccgtgcaa
      721 aaggccaggt cgggccatcc tggcacgccg atgggcatgg cgccagttgg gtataccctg
      781 tggcaacacg cgctgcgcta cgacccggcg gatccgcatt ggcctaaccg ggaccgcttc
      841 gtactctctg tcggccacgc gtccatgctg ctctactcgt tgctgcacat cgcccgcgtt
      901 gcctccgacg tcgagcacaa ggacaagggc ccgtacgcgg tcaccctcga tgacatcaag
      961 caattccgcc agctttcctc ggtcacgccg ggtcacccgg aataccggct gacctcgggt
     1021 gtcgagacga ccaccgggcc gctggcgcag ggcgtgtcca acagcgtcgg catggcgatg
     1081 gcgcagcgct tcctggccaa ccgctataac aagcccggct tcccgctgtt cgactaccac
     1141 gtctatgcgc tgtgtggtga cggctgcatg atggagggcg tgtccaacga ggccgcctcg
     1201 ctcgccggtc acctgaagct cggcaacctg acctggatct acgacagcaa ccacatcacc
     1261 atcgagggtg ccacgagcct ggcgttcggt gacgacgtgg gcgcccggct gggtgcgatg
     1321 ggctggcacg tgatccatgt ggacgatgcg aacaacaccg tcgctgtggc aaaggcgctg
     1381 gacgaggcga aggcgttcac tgacgcgccg actatcatcg tcgtgcacag catcatcggc
     1441 ttcggcgcgc ccaagaaggc cggcacgcgc gaggcgcatg gtgagccact gggcgacgag
     1501 gaaatcaagg gagccaagcg ccactatggc tggccggaag actcgcaatt cctggtgccg
     1561 gacggcgttt acgagcggtt ctccgaagtc atgggcgcac gcggcgctga ggcgcggcac
     1621 cagtggatgg acctgctgac caagtaccgg gagcaatacc ccgatttggc acgcgaactg
     1681 gacatgatcg accggcacga attgccggaa gactgggata gcgagatccc cgttttcccg
     1741 gcggacgcga aaggcctcgc atcgcgcgat tcgtcccaga aagttctgaa cgccatcgcc
     1801 aagcatgtgc cctggataat tggcggcgcg gccgacctgg cgccgtccac caagtccaac
     1861 ctgacatttg acggcgccgg gtcgttccag ccggacaatt acggcggccg caacctgcat
     1921 ttcggcatcc gcgagcacgt catgggctcg gcctgcaacg gcatcgcact gtccggcatg
     1981 cgcgcctatg gcagcggctt cctgatcttc tccgactaca tgaaggcgcc gatccggctt
     2041 tccgccatca tggaattgcc ggtcatctac atcttcacgc atgacagtat cggcgttggc
     2101 gaagacggcc cgacccacca gccgatcgaa cagcttgcgg cgttgcgcgc gatccccggc
     2161 atgatcgtgc tgcgcccggc ggatgccaac gaggtggcgg aggcctggcg cgtagtgatg
     2221 aagctgacgc gccacccggc gtgcctcatc ctcagccgcc aggcgctgcc gaccatcgat
     2281 cgcagcaagt tcgcctccgc cgcgggcacc gccaagggcg cctacgtcgt ggcagactgc
     2341 gaaggcacgc cgtccgtcat cctgatgggc accgggtccg aactggccct atgcatgggc
     2401 gcctatgaga cgctgaccgc cgagggcgtg aaggcgcggg tggtgtcgat gccgtcctgg
     2461 gagctgttcg aacaccagga tcaggcgtac cgcgacgagg tgctgccgcc ctcggtcaag
     2521 ggccgcgtag cggtcgagca ggcggcgacc ctgggctggg accgctacat cggcatgggc
     2581 ggcggcatga tcgggatgca taccttcggc gcctctgccc cgctggcggc gctgcagaat
     2641 caattcggct ttacgccgga ggcagttctt gaagaagccc gcaagcaggc caggcgcacc
     2701 agctaaggag agccagcatg gccatgcaga ccgagacggc caatccgctg aagtcgctcg
     2761 agcagttcgg ccaggcgctt ctacggtgcc gacacgctcg acccggccaa gccgctgttc
     2821 gacgtgaacc tcctgggcct gggtgaagac gggcacaccg cctccctgtt cccaggctta
     2881 gccgctctcc aagaacgcac cgcgtggacc gccaccgtga tcggcgccaa gccagggcca
     2941 cggcgaccct gacttgccca gtgctggaca gcagtcgcgt ggtcgcattc ctcgcggccg
     3001 gggagggcag gcgtgccata ctggccaggg cgctggcggg cgacacggcc ctgcccgccg
     3061 tgggtgtcca cccggccggt gaactgcgct ggttcaccga caaggcggcc atggggcagt
     3121 gaccagcggt tcgaacgccg cagtagagtg atagaaccta aagcgcagta cggcctgcct
     3181 cacgttgggc tcggcatctg gccagctacc agcgccagaa gcaatcttgg aaataacgca
     3241 tgcttagatg cgcactaacg attgcggccg tgttgagcgt tcagttactc cagaagccgg
     3301 cttgggcctg ctcgccacaa gaattggcgg tcgagg
//
LOCUS       DATAVD010001238         2826 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_121926, whole genome shotgun sequence.
ACCESSION   DATAVD010001238 DATAVD010000000
VERSION     DATAVD010001238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2826
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121926"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1173
                     /locus_tag="VHX39_23650"
     CDS             <1..1173
                     /locus_tag="VHX39_23650"
                     /inference="COORDINATES: protein motif:HMM:NF039910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX3994177.1"
                     /translation="LGEKLIAFRDSSGRIGVMDHRCPHRCASLFFGRNEEGGIRCVYH
                     GWKFDTAGNCLEMPNLPADQDFREKVKARAYAAAERGGLVYVYMGERAVAPPLPALEV
                     MLCPPEETEFSCKQRECNWLQALEGDIDTSHFSFLHTGKVDIGDIDPNHLERFQLIDR
                     APDYHVRPTDWGTMYTAHRPAEPGYTYYRFAHFAMPFWTLFPNGPLQDNVIAQAWVPM
                     DDTHTMSYYFSWKRRTPALGLLKTGEPIPYLDRATATLPNSTDWFGRWRPAANQGNDY
                     LIDRDAQRSFSYSGIAEVFTQDSAVTESMGAISDRSLEHLAPSDRMIAVTRRRLLDAA
                     RALRDHGTVPPLVDNPQAGTIARSGDLIAPAEQRWLDAYEQTLTQASHPGFAEAAE"
     gene            1179..1643
                     /locus_tag="VHX39_23655"
     CDS             1179..1643
                     /locus_tag="VHX39_23655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994178.1"
                     /translation="MDEFDHSSGRAGADFGPFTLLTYMLAFALCLMTCLLSLSQMQEV
                     GPDVGEIVTFDPHDGPKRWEMPGIPARLAAPRQSCVLTPSVIAAVGGSFVIEAKQLDH
                     PPVYLVHWSGLRTDNGPQDCGRSADLLLPLVQLRALANVAGGFGVVHGWFPG"
     gene            complement(1644..2435)
                     /locus_tag="VHX39_23660"
     CDS             complement(1644..2435)
                     /locus_tag="VHX39_23660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminyl-peptide cyclotransferase"
                     /protein_id="HEX3994179.1"
                     /translation="MKAFLFALAVLAALPRLAYAAVPVYGATVVQKYPHDPKAFTEGL
                     LYHDGFLYESTGRNGQSSIRKVVLRTGAVVQEKALDPGYFGEGIVVWKNHLIQLTWQT
                     QIGFIYDLATFQQLSTFHYPGEGWALTEDGHHLIMSDGTSDLRLLDPESLNETGRIHV
                     TCDGQPVRLLNEIEWVKGEVYANIWRTNYIARIDPATGNVTGLIDLTALANATVVPAA
                     ENVLNGIAYDAKGNRLFVTGKLWPALYQIKLSPKPTGEQSCQAQK"
     gene            complement(2459..>2826)
                     /locus_tag="VHX39_23665"
     CDS             complement(2459..>2826)
                     /locus_tag="VHX39_23665"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEX3994180.1"
                     /translation="GHFALSAIVLRFSNASGQLGAAIGMDSAFMQQQRRGFSTFELSL
                     RISGALPVNAPYLIETGIGHLGNSSLRMIHRLTDPRSGVEIARLGQYGVNLDLDARRP
                     ARWPDDIRNRAAALVVPVG"
BASE COUNT          545 a          800 c          897 g          584 t
ORIGIN      
        1 ctgggcgaaa agctgattgc gtttcgcgac agcagcggga ggatcggcgt gatggatcat
       61 cgctgcccgc accgctgtgc ctcgctgttc tttggccgta acgaggaagg cggcattcgg
      121 tgcgtctacc acggctggaa attcgacacc gcgggcaatt gcctggagat gcccaatcta
      181 ccggccgatc aggatttccg cgagaaggtc aaagcccggg cctacgccgc agccgaacgc
      241 ggcgggttgg tttatgtgta catgggcgag cgtgcggtgg ctccgccgtt gcctgcactg
      301 gaggtgatgc tttgcccgcc cgaggaaacc gagttcagtt gcaagcagcg cgaatgcaac
      361 tggctgcagg cgctggaggg cgatatcgac acctcgcatt tcagtttttt gcacaccgga
      421 aaggttgaca ttggcgacat cgacccgaac cacctggaac gcttccaact gatcgatcgt
      481 gcaccggact accatgtcag gccaaccgat tggggcacga tgtacacggc acaccggccg
      541 gcggagcctg gttacaccta ttaccggttc gcccattttg cgatgccgtt ctggacgcta
      601 tttccgaatg ggccgttgca ggacaacgtt atcgcccagg cgtgggtgcc gatggatgac
      661 acgcatacga tgtcgtatta tttcagttgg aagcggcgga ctcccgcact gggtttgctg
      721 aagaccggcg agccgattcc ttacctggac cgcgccacgg cgacgttgcc caattccacc
      781 gactggttcg gccgttggcg gccggcggca aatcaaggca acgactatct tattgatagg
      841 gatgcgcaac ggagtttcag ctacagcggg atcgccgagg tgtttacgca ggactcggcg
      901 gtgacggaaa gcatgggcgc gatcagcgac cgctcgctgg aacatctggc acccagtgac
      961 aggatgattg cggtgacgcg gcgacggttg ctcgatgcag cgcgtgcttt gcgcgatcac
     1021 ggcacggtgc ctccgttggt cgacaatccg caggccggca cgatcgctcg gtcgggtgat
     1081 ctgatcgcgc cggcagaaca gcgatggctt gacgcttacg agcagaccct gacgcaggcg
     1141 tcgcatcccg ggtttgccga agccgcggaa taacgcagat ggacgaattc gatcactcgt
     1201 ctggtcgcgc cggtgcagac ttcgggccgt tcacgctgct gacctacatg ttggcgttcg
     1261 cgctgtgcct gatgacctgc ctgttgagcc tgtcgcaaat gcaggaggtt ggtcccgacg
     1321 ttggtgagat cgtgacgttc gatccgcatg acggacccaa gcggtgggag atgccgggaa
     1381 ttccggcgcg tctcgccgcg ccgcggcaga gttgtgtgct gacgccgtcg gtgatcgcgg
     1441 ccgtcggcgg tagtttcgtg atcgaggcga aacaactgga tcatccgccg gtttatctgg
     1501 tgcactggtc tgggctccgc acggataatg gaccgcagga ttgcggcaga tcagcagact
     1561 tgctgttgcc gttggttcag ttgcgagcgc tggccaatgt cgccggtggg tttggcgtgg
     1621 tgcacggctg gttcccgggc tgattacttc tgcgcctgac aggattgttc cccggtcggc
     1681 ttcggtgaca gctttatctg atacagcgcc ggccaaagct ttccggtaac gaacagccga
     1741 ttgcccttgg cgtcgtaggc gatgccgttc aacacatttt cggcagccgg aacgacggtc
     1801 gcgttggcca gagcggtcag gtcgatcagc cccgtgacgt tgccggtcgc gggatcgatc
     1861 cgggctatgt aattcgtccg ccagatgttg gcgtagactt cgcctttgac ccattcaatt
     1921 tcattgagga gccgcacggg ttgaccgtcg caggtgacat gaatacggcc ggtttcgttt
     1981 aagctctccg gatcgagcaa gcgcaggtcg ctggttccat cgctcataat caaatggtgg
     2041 ccatcctcgg tcaaagccca gccttcgccg gggtaatgaa atgtcgagag ttgttggaag
     2101 gttgcgagat cataaatgaa gccgatctgg gtttgccagg tcagttggat cagatggttt
     2161 ttccagacga cgatcccttc gccgaagtag cctggatcaa gcgctttctc ctgcacgacc
     2221 gctccggtcc gaagcacgac cttgcgaatc gaggactgcc cgttgcggcc cgtgctctca
     2281 tacaaaaatc cgtcgtgata tagcagacct tcagtgaagg ccttcggatc gtgcggatac
     2341 ttttgaacca ccgtggcgcc gtataccgga accgcggcat aagccagtcg aggcaatgcc
     2401 gccagaactg ccaacgcgaa aaggaacgct ttcattgccc ctccttgtga agtggtgatt
     2461 agccgaccgg aacgacgaga gcggcggctc ggttgcggat atcgtcgggc cagcgagccg
     2521 gacggcgcgc gtcgagatcg aggttgacgc catactgtcc cagtcgcgcg atttccacac
     2581 cactgcgcgg gtcggtcaag cggtggatca tgcgcaacga cgaattgccg agatgcccga
     2641 tgccggtctc gatcagatag ggcgcattga cgggtaacgc tccggaaatc cgcaagctca
     2701 attcgaaggt cgaaaagccg cgtctttgtt gttgcataaa cgcagagtcc atgccgatcg
     2761 ccgcaccgag ttgaccggag gcattggaga accgcaacac gatcgccgac agcgcgaaat
     2821 ggcctg
//
LOCUS       DATAVD010001239         2973 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_303389, whole genome shotgun sequence.
ACCESSION   DATAVD010001239 DATAVD010000000
VERSION     DATAVD010001239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2973
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_303389"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..223)
                     /locus_tag="VHX39_23670"
     CDS             complement(<1..223)
                     /locus_tag="VHX39_23670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3994181.1"
                     /translation="MLLEFRHVDTHYGDLHVLKDVNYAIEPGEIVALLGGNASGKSTT
                     MKTIMGVVRPTRGEVIYDGEPIERLATAER"
     gene            complement(227..2263)
                     /locus_tag="VHX39_23675"
     CDS             complement(227..2263)
                     /locus_tag="VHX39_23675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3994182.1"
                     /translation="MSALSRPFEAIPEAWRRRIGLGLLIAAAVLFPVLHNNDADIDSM
                     ANASAYAVLALGLNIVVGFAGLLDLGYAAFFAIGAYTYGILSSFQLQPDWSSFWEPFR
                     LLGLVSKMAAESGDGSVVHFTLSFWLALPLAAGFAAFWGVMFGAPTLRLRGDYLAIVT
                     LGFGEIVPIVVRNWSDLTNGAAGLNGVRAPRLFGWSFGVNSTPYYYVAVCLVALLIFV
                     SIRLRDSRIGRAWMAIREDEIAAAAMGVNRTKFKLLAFAIGAAFGGMTGVFYVAKLQT
                     ATPEMFGFPVSVMILVMIVFGGIGSVWGVVLGAYILQLLQSWWLEDLTGWLNALGRAV
                     HSNWLTQVDLAPSIELIFGFILVGMMLFRRQGLIPATRPHTALSFDQQHAEIRRGGFT
                     DLKLQGLGGAVRTGAVALEIRGVTVKFGGLTALNSVDVVVPNGGVVAVIGPNGSGKST
                     LFNVITGLVEAEVGSIHFHGEEIIGLPPHEILTKGIARTFQNLRLFPNLTVMENALIG
                     QHARLTTGVVQAILRPPHTRAEETAARHWAMEVFAIFGNRLTPRVGQMVSGLSYANRR
                     RIEIARALASRPRMLLLDEPTAGMNPAETLELAEQIKSLNQLGLTVLLIEHKLDVVTT
                     LADTVYVLDHGDIIAQGTPAEVRQDEEVLRAYLGRNAQAAAAGAMEVSLPIPGQ"
     gene            complement(2260..>2973)
                     /locus_tag="VHX39_23680"
     CDS             complement(2260..>2973)
                     /locus_tag="VHX39_23680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3994183.1"
                     /translation="PLLGVLITAVVVTMLCCGMLGVLIERLSLRPLRGVKGPSAMITT
                     IGVSYILFNVILLSCGAEGKNFPNPMPTVRYKIGGAVLDIRVVLIWVVALLLMGGLYL
                     FVQKSRIGKAMRATAQDAEAARMMGVDVDRVVMTAFFLGSALAGAGGLIFGLYYNFTS
                     FIIGFTAGLRAFTAAVLGGIGNVPGAMVGGIIIGMIEAMGGQFIATAWTDVIIFSILV
                     LVLVFKPAGLFGRMAPTKS"
BASE COUNT          656 a          974 c          853 g          490 t
ORIGIN      
        1 cacgttccgc ggtggcaaga cgctcgatcg gctcgccgtc gtaaatcacc tcgccacgcg
       61 tgggccgcac cacgcccatg atcgtcttca tcgtggtcga tttaccggac gcgttgccgc
      121 ccagaagtgc aacgatttcc ccgggttcga tggcgtagtt aacgtccttc aaaacgtgca
      181 ggtcgccgta atgggtatcg acatggcgga actcaagcag catggttcac tgtcccggga
      241 tcggcagcga cacttccatc gctcccgcag ccgccgcctg ggcgttgcgt ccaagatagg
      301 cccgcagcac ctcctcatcc tgccgaactt ctgccggcgt gccttgcgca atgatgtccc
      361 cgtggtcgag cacatagacc gtgtcggcca aggtggtaac gacatccagc ttgtgctcga
      421 tcagcagcac tgtcaggccg agctgattga ggcttttgat ttgctcggcc agctccagag
      481 tttccgccgg gttcattccg gcagtcggtt cgtccaggag cagcatgcgc gggcgcgatg
      541 ccaaagcgcg agcaatttcg atacgccgcc ggttggcata ggacagcccc gaaaccattt
      601 gcccgaccct gggcgtcagc cgattgccga aaatggcgaa gacttccatg gcccagtggc
      661 gggcggcggt ttcctcggcg cgggtatgag gcggacgtag gatcgcctgc acaacgccgg
      721 tcgtcagtcg cgcatgctgc ccgatcagag cgttctccat caccgtcaga ttcgggaaca
      781 gccgcaaatt ctggaatgtg cgggcaatcc ctttggtcag gatttcgtgt ggcggcaggc
      841 cgatgatttc ttcgccatgg aagtggatgg agccgacctc ggcctcgacc aacccggtga
      901 tcacgttgaa cagagtggac tttccggaac cgttcggccc gatcaccgcg accacaccgc
      961 cattcggcac gaccacgtca accgagttca gcgcggtgag gccgccaaac ttaaccgtca
     1021 cgcctctgat ctccaacgca accgcgccgg tgcgcacggc gccgccgaga ccttgcagct
     1081 tcaaatcggt gaagccgccg cgacggattt ccgcgtgctg ttggtcgaag ctcagcgccg
     1141 tgtgcggacg ggtcgccggg atcagaccct ggcggcggaa caacatcatg ccgacaagga
     1201 tgaaaccgaa gatcagctcg atcgatggtg ccaaatccac ctgtgtcagc caattgctgt
     1261 gtacggcacg gcccagagca ttcagccagc cggtcagatc ttccaaccac caggactgca
     1321 acaattgcag gatgtaagcg ccgagcacga ctccccagac actgccgatg ccgccgaaca
     1381 cgatcatcac caggatcatc accgagacgg ggaagccgaa catttccggt gtcgcggtct
     1441 gcaacttggc gacatagaac accccggtca tgccgccgaa cgcggcaccg atggcgaagg
     1501 ccagcaattt gaatttggtg cggttcacgc ccatcgctgc ggcagcgatc tcatcttcgc
     1561 ggattgccat ccaggcgcgg ccgatacgcg aatcccgcaa ccggatggac acgaagatca
     1621 gcagcgcgac gaggcagacg gcgacataat aataaggcgt cgaattgacc ccgaaactcc
     1681 aaccaaacaa cctgggtgcc ctcacgccgt taagcccagc ggcaccgttg gtcaaatcgg
     1741 accagttgcg gacgacgatg gggacgatct cgccaaagcc cagggtgacg atcgccaggt
     1801 agtcgcctcg taaccgcaag gtgggggctc cgaacatgac gccccagaac gccgcaaacc
     1861 cggctgccag cggcaacgcc agccagaatg acaaggtgaa atgcacgacg ctgccgtcgc
     1921 cggattccgc cgccatcttt gacacgaggc caagcagccg gaacggttcc cagaacgacg
     1981 accaatccgg ttgcaactga aacgaactca ggatgccgta ggtgtaggca ccgatggcaa
     2041 aaaacgccgc gtagccgaga tccagcaggc cggcaaagcc gaccacgatg ttcaatccta
     2101 atgccagcac ggcataggcc gacgcatttg ccatgctgtc gatgtcggca tcgttgttgt
     2161 gcagcaccgg aaacaggacc gcagcggcaa tcagcagccc gaggccgata cggcgccgcc
     2221 acgcctcggg aatggcttcg aacggccgcg aaagtgcgct cacgatttgg tcggcgccat
     2281 ccgcccgaac aaaccggccg gcttgaacac cagcaccaga accaggatcg agaagatgat
     2341 cacatcggtc cacgcagtcg cgatgaactg tccgcccatt gcctcgatca tgccgattat
     2401 gatgcctccc accatcgcac ccggcacgtt gccgataccg cccagtactg cggcggtaaa
     2461 ggcgcgcaga ccggcggtga agccgatgat aaagctggtg aaattgtagt acaggccgaa
     2521 gatcagtccg cctgctccgg ccaatgccga gccgaggaag aacgccgtca tcacgacccg
     2581 gtccacatcc acgcccatca tccgcgccgc ttcggcatcc tgcgccgtgg cgcgcatcgc
     2641 cttgccgata cggcttttct gcacgaacaa atacagcccg cccatcagca acagcgccac
     2701 cacccagatg agcacaacgc gaatatccag caccgcgccg ccaattttgt atcggaccgt
     2761 cggcatcgga ttggggaaat tcttgccttc cgcaccacac gataacagga tgacgttgaa
     2821 caggatgtag gagacgccga tggtggtgat catcgccgac ggccccttca ccccgcgcaa
     2881 cgggcgcagc gacagccgtt cgatcagcac acccagcatg ccgcagcaaa gcatcgtcac
     2941 gacgaccgcc gtgatcagca cgcccagcaa cgg
//
LOCUS       DATAVD010001240         4372 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3279662, whole genome shotgun sequence.
ACCESSION   DATAVD010001240 DATAVD010000000
VERSION     DATAVD010001240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4372
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3279662"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VHX39_23685"
     CDS             complement(<1..183)
                     /locus_tag="VHX39_23685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3994184.1"
                     /translation="MAATSAKRFGRRSILAAAGVAAGGGAITGFPTIWAQNIKNVTLR
                     QFGTGVSNLNAVAEKVK"
     gene            752..1375
                     /locus_tag="VHX39_23690"
     CDS             752..1375
                     /locus_tag="VHX39_23690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX3994185.1"
                     /translation="MLWPDMDGCSVLGIGYTVPYLRAWDGAVYRRIALTPAQIGAIRW
                     PPDAPNLSCTAEEDALPFPDLVFDRILLVHGLEVAENARRMLREAWRVLKDDGRLLIV
                     TPNRTGMWAYWESTPFGHGQPYTAGQLGRLLSGTLFRVERRDTALWMPPWQARLILRG
                     APLFERAGRRLAPGLAGVTITEAVKDVYAAVPLRAATRRRLVQVQAG"
     gene            1427..1582
                     /locus_tag="VHX39_23695"
     CDS             1427..1582
                     /locus_tag="VHX39_23695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994186.1"
                     /translation="MYPLDEVLLLATLASAGRFVDIGRFGCEKHAFPPMKATALGLQP
                     KANTLPC"
     gene            complement(1762..3288)
                     /locus_tag="VHX39_23700"
     CDS             complement(1762..3288)
                     /locus_tag="VHX39_23700"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3994187.1"
                     /translation="MSGNAAHAIGVEAIGIGKRFGPFQALADVSMKVRPATVHGLLGE
                     NGAGKSTLVKCLLGYYRADTGSFLVENKETTIERPADADALGLGMVYQHFTLVPSMTV
                     AENLVMSRRDIPAVIDWRSELGHLADFMRRMPFKVPLDAEVGTLAAGERQKTEIIKQL
                     YLQRRFLVLDEPTSVLTPQEADEMLGLVRDLAHSGQLTIVIITHKLKEVAKFVDEVTV
                     LRRGRFAGAGAVRDLGPEELTAMMIGERHTPADPERVGTTSKEVRLAVRDLRTAADGG
                     RAGLAIDALTVHAKEIVGIAGVSGNGQKDLVEALGGQRPIVSGSVEVDGAPYGAGRME
                     SQAHDVRVLPEEPLRNGCVPSMSVMDNLALRSFDRGADGTPRRWLDRPGITARAKTMI
                     AAYGIRAPSPEAPIGVLSGGNVQRCVLARELDGVVRLLIVANPCFGLDVRAAAQTRAR
                     IMAARNAGTAVLLISEDLDEILELADRIVVMHGGQVTHDIPAAGADPQEIGRHMLGHG
                     "
     gene            complement(3401..4324)
                     /locus_tag="VHX39_23705"
     CDS             complement(3401..4324)
                     /locus_tag="VHX39_23705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3994188.1"
                     /translation="MADVAALPTVAGAMMAGSLRVSTPFLFVSIGECLTEKSGRINLG
                     NEGVLVLGAMVAYATSYETGSPWAGVLAAAIAGLVLGGLHGAVCSLARVNDVAMGIAI
                     MLAGTGIAFYFGKPYIQPSAPLLPGIPLAWWSQSPQLRNALLVCPLFFVGLAAAVAMH
                     WFFRATRTGLRIRIVGDSQDAALALGLAIDRTRFLATAAGSALAGIGGAFLSLYYPGS
                     WNEGLSSGQGLMAVALVVFARWNPINCIYASLLFGAAGALGPSLQTVGVTWGYYLFYA
                     APYVVTLIVLIISARGGGSLRGMPGQLSIGR"
BASE COUNT          815 a         1455 c         1338 g          764 t
ORIGIN      
        1 cttcaccttt tcggcgacag cattgaggtt cgacaccccg gtgccgaact gacgcaacgt
       61 gacgtttttg atgttctgag cccagatggt ggggaacccg gtgatggctc cgccacccgc
      121 cgccacgccg gctgcggcca gaatggaacg gcggccgaac cgctttgccg aggttgctgc
      181 catttgcctg tcgccttcct gttgtccgaa ttgtatttga ccgagggact gaggcgatcg
      241 ttgcatggcc tgtgccagca atgaaggcag ccgacatggc cggctccagc gcgtgtcccg
      301 gcgcggccgg acactacctg tacgcggttt ttgaccaatc cgcggtcatt cgcctggcga
      361 tcgggtgcct ggctgcttca ttgaacggca gtcgatgacg cgttgcagcg tggttcgccc
      421 ccttacccgg gcgaatcagg cgctgccgtt cacgtctctc gtcgaacagg taacgaagct
      481 cgcggcttcg ctggacagga aaccgaccac cgacgcgatc tcctccggct cgccgcccgg
      541 caaggctcgc cgcccagagc ccgttgcctc gagacttccg gcgcccgcgc acccatcgcg
      601 gtattgatca gacgagcggg aggagggtgc cacatccgga aaattccccc tatcatcctg
      661 ccgcatgacg gcggacgcgc acgcggcatc ggagttttac cggacctctc ggggggcagt
      721 aaccgcgagg ctactgcgcg agcggattgc catgctgtgg ccggacatgg atggctgctc
      781 cgtgctcggc attggttata ccgttcccta tctgcgcgcc tgggacggcg cggtgtatcg
      841 tcgcatcgcg ctgacgccgg cacagatcgg cgcaatccgc tggccgcccg acgcacccaa
      901 cctgtcctgc accgcggaag aggacgcgct gccgttcccc gatctggtgt tcgatcgcat
      961 cctcctcgtg cacgggctgg aagtggcgga aaacgccagg cgcatgttgc gggaagcgtg
     1021 gcgcgtgctg aaagacgacg gacgcctgct gatcgtcacg ccgaaccgga ccggcatgtg
     1081 ggcctactgg gagagcacac cgttcggcca tggccagcct tacacggccg gccagctcgg
     1141 gcggctgctg tcgggcacgc tgttccgggt cgagcggcgc gatacggcgc tatggatgcc
     1201 gccgtggcag gctcggctga tcctgcgggg ggcgccgttg ttcgagcggg caggacgtcg
     1261 gttggcgccc ggcctcgcag gggtcacgat tactgaagcg gtgaaggacg tttacgctgc
     1321 ggtgccgttg cgagcggcga cacgtagaag gttggtgcag gtgcaggctg gatagtcgcc
     1381 cgaaatcagc ggtcattgcg ggaatctgcg ccagcgcggc aaggttatgt atccgctcga
     1441 cgaggtgctg ctcctcgcga cgctcgccag cgccgggcgc ttcgtcgata tcggccggtt
     1501 cggctgcgaa aagcacgcgt ttcccccgat gaaggcgacc gcattgggcc tccaaccgaa
     1561 ggcaaacacc cttccctgct gacaggcgtc taaattcgct aatttcgggt catgccggca
     1621 accgatgtga cgacgaaacc tcgaacgtcg cgacaaccgt gatgcgcgcc cgctctcttc
     1681 tcgaaggtcg gcacgggtgg ttcccatcct gccgcccgcc ccgagggaat gtcgatggcg
     1741 tcggtttcag ggcgggccac cttacccatg cccaagcata tgccgcccga tctcctgcgg
     1801 atcggcgccg gcggcaggaa tgtcatgcgt cacctggccg ccgtgcatga ccacgatgcg
     1861 gtccgccagt tccagaatct cgtccagatc ttccgatatc agcaacaccg cagtcccggc
     1921 attgcgtgcc gccatgatcc gggcacgggt ctgggctgcc gccctcacgt caagtccaaa
     1981 gcacggattt gcaacgatca gcagccgcac gacaccatcc agttcgcgtg ccagcacgca
     2041 acgttgcaca ttgccgccgg acaaaacgcc gattggcgcc tctggtgagg gcgcccgaat
     2101 gccataagcc gcaatcatgg ttttggcgcg cgccgtaatg ccgggccgat ccagccaacg
     2161 ccggggtgtc ccgtccgcac cacgatcgaa gctgcgcagt gccagattgt ccatcacgct
     2221 catactgggc acgcaaccat tgcgcagcgg ctcctccggc agcacccgca cgtcatgcgc
     2281 ctgcgattcc atgcggccgg cgccgtaggg agccccgtcg acctcgaccg agccggacac
     2341 gatcggacgt tggccaccca acgcttcgac cagatccttc tggccgttgc cagacacacc
     2401 ggcaatgccg acgatttcct tcgcgtgcac cgtcagggcg tcgatcgcga ggccggcgcg
     2461 tccaccatcg gcggcggtgc gaaggtcgcg aaccgcaagc cgtacctcct ttgacgtcgt
     2521 gcccacacgt tctggatcgg cgggcgtgtg tcgctcaccg atcatcatcg cggtcagttc
     2581 ctccgggccc agatctcgca ctgcaccggc accggcgaac cggccgcggc gcagcacggt
     2641 gacctcatcg acaaatttcg ccacctcttt caatttgtgc gtaatgatca cgatggtgag
     2701 ttgcccggaa tgcgcgagat cgcgcacgag gccgagcatt tcatccgcct cttgcggcgt
     2761 gagcaccgag gttggctcgt ccagcaccag aaagcgccgc tgcagatata gttgcttgat
     2821 gatctcggtc ttctgccgct cgcctgccgc aagcgtgccg acctcggcgt ccaagggaac
     2881 cttgaacggc attctgcgca tgaaatccgc cagatgaccg agttcgctgc gccaatcgat
     2941 gactgccggt atgtcgcgcc gcgacatgac aagattctcg gccacggtca tcgagggtac
     3001 caaagtgaaa tgctggtaga ccatgcccag gccgagcgcg tcggcatcag cgggccgctc
     3061 gatggtggtt tctttattct ctaccaggaa agaaccggta tcggcacgat aataccccaa
     3121 caggcattta actaacgtcg atttgcccgc gccgttctca cccagcaacc catgcacagt
     3181 ggcgggacgg actttcattg aaacatccgc cagtgcctga aacgggccga accgtttgcc
     3241 tatgccgatc gcttccacgc caatggcgtg cgctgcattc ccgctcatgg cagcgccgcg
     3301 gctgacatag tgctatcgcc aaccgctcct ccttgcaccg cgccagtgtg agtaccgggc
     3361 catggatacg gatcggcatc gatgctgaga gtgatcacgc ttatctcccg atcgaaagtt
     3421 ggccgggcat gccgcgtaac gaaccgccgc cgcgcgcact tatgattaac acgatcagag
     3481 tcacgacata aggcgcagca tagaacaggt agtagcccca ggtgacgccg accgtttgca
     3541 gcgagggacc gagcgcgcct gccgcgccga acagcaatga ggcatagatg caattgatcg
     3601 ggttccagcg cgcgaacacc accagtgcca ccgccatcag gccttggccg gaggacaggc
     3661 cttcgttcca actgccgggg tagtacaacg acaggaacgc accaccgatc ccagccaacg
     3721 cgctgccggc ggcggttgcc aggaagcggg ttcgatcgat cgccaggccc agagcgagcg
     3781 cggcatcttg actgtcgcct acgatccgga tccgcaggcc cgtgcgtgtg gcgcggaaaa
     3841 accaatgcat cgccactgcg gctgcaagtc ccacaaaaaa caacggacac accaacagtg
     3901 cattcctcaa ttgaggtgac tgtgaccacc acgccagtgg gatccctggc agcagcggtg
     3961 cagaaggctg gatatacggt ttgccgaagt aaaacgcgat cccggtgccc gccagcatga
     4021 tggcgatgcc catcgccacg tcgtttaccc gggccaacga acacaccgca ccatgcagcc
     4081 cgcccaacac caggcccgct atcgcggcgg ccaatacccc tgcccaggga ctgccggttt
     4141 cgtaggacgt ggcgtaggca accatcgcgc caagcaccag cacgccctcg ttgcccaaat
     4201 tgatgcggcc ggatttctcg gtcaggcact caccgatcga gacgaacagg aacggggtgc
     4261 tcacgcgcag gctgccggcc atcatggcgc cggcaacggt cggcagagca gcgacgtcgg
     4321 ccatcaggcg tctccgcgcg gctggaacca cccgacacgg ccgtagatcg tg
//
LOCUS       DATAVD010001241         2267 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3656164, whole genome shotgun sequence.
ACCESSION   DATAVD010001241 DATAVD010000000
VERSION     DATAVD010001241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3656164"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VHX39_23710"
     CDS             complement(<1..416)
                     /locus_tag="VHX39_23710"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEX3994189.1"
                     /translation="MKSAFIVLGVLLLAPLGSLRAGDAAPAARKPNVVVIVTDDQGAA
                     DAGCYGAKDLLTPNIDAIATHGVRFTQFYAGAPVCSPSRAALMTGRYPLRAGLIGNAS
                     SEPGGKAAMGAEQVTMAMMFKAAGYATAHIGKWHLG"
     gene            complement(428..1654)
                     /locus_tag="VHX39_23715"
     CDS             complement(428..1654)
                     /locus_tag="VHX39_23715"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEX3994190.1"
                     /translation="MKTHLALALFCLAPLAVLTAADVPAPTANPTWTTVSVDSPAFVF
                     SPGNWIGDEGRGGKVFRQAWNAGAYFRVAWKSKNAVPAAKLLLDVSTYTSTFKPPKLA
                     YSIDGVWKSNVDCANEIPIDDLKGAGDHELDVVVQSSEQKERWGSPGQSPLNVVRIAG
                     LQVDADSQPVPDKARPRWALIIGDSITEGIGATELACYSHLLGQALLTVGCEYGLSAC
                     GWNGWIFKGDNPPGDVPGYYNMREGSAAGSYEYDDATSRWNKIDGNNHSLLDAHGHIS
                     AYGGTGQEPALIFFNYGTNDAIHHADHGQTVASINQGLAAVRAAAPEAEIIVLVPFGQ
                     YYVSELKAAVEIRRNGPAKDRKIDVIDLGPGVAKNLAVKKGLMGGLHPNDRGNANFAA
                     EIIPQVIRRLPFSSQP"
     gene            complement(1706..>2267)
                     /locus_tag="VHX39_23720"
     CDS             complement(1706..>2267)
                     /locus_tag="VHX39_23720"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sodium transporter"
                     /protein_id="HEX3994191.1"
                     /translation="LTAAIVASLAGKANSIGTIFTLDLYQRYVNPKAGEATLIRVGRV
                     AIFASATVAVLIAPQLSKLDQAIQYIQEYTGFISPGVCVIFLLGFFWKRATSAGALAV
                     ALLTIPLSAAFKFWTPNVPFMDRMGWVTLILAALMIVISLFTHRPGDDAKAMHWEAAD
                     FQPGATFVIGSVLVMGALAALYAVYW"
BASE COUNT          433 a          744 c          686 g          404 t
ORIGIN      
        1 aacccgagat gccatttgcc gatgtgcgcc gtggcgtatc ccgccgcctt gaacatcatc
       61 gccatcgtca cctgctccgc gcccatcgcg gctttgcctc ccggctccga tgacgcattg
      121 ccgatcaatc ccgcgcgcag cggataccgc cccgtcatca gcgccgcgcg cgacggggag
      181 cacaccggcg cccccgcgta gaattgcgtg aaacgcacgc cgtgcgtcgc gatggcatcg
      241 atgttcggcg tgagcaaatc cttcgcgccg taacaccccg cgtccgccgc gccctggtcg
      301 tcggtgacaa tgactacgac gttcggtttg cgggcggcag gcgccgcgtc tcccgcgcgg
      361 agactgccca gcggcgcaag aaggagaacg ccaaggacga tgaaagcaga tttcatgaga
      421 acaggaacta tggctgggat gaaaaaggca ggcgacgaat cacctgcgga ataatctcgg
      481 cggcgaaatt ggcattgccg cgatcattcg gatgtaaccc gcccatcagc cctttcttga
      541 ccgcgagatt cttcgcgacg ccgggcccga gatcgatgac gtcgatcttc ctgtccttcg
      601 ccgggccatt ccggcggatc tccaccgccg ccttcaactc gctgacataa tactggccga
      661 acggaacgag cacgatgatc tccgcctccg gcgccgccgc ccgcaccgcc gcgagtccct
      721 ggttgatgct ggccaccgtt tggccgtgat ccgcgtggtg gatggcatcg ttggtcccgt
      781 agttgaagaa aatcagcgcc ggctcctgcc ccgtcccgcc atacgcgctg atgtgtccgt
      841 gcgcatcgag caacgaatga ttgttcccgt cgatcttgtt ccagcggctc gtggcatcgt
      901 cgtattcgta actacccgcc gcgctaccct cgcgcatgtt atagtaaccc ggcacgtcgc
      961 ccggcggatt atcgcctttg aagatccatc cattccatcc gcacgcgctg aggccgtact
     1021 cgcaccctac cgtcaaaagc gcctgtccaa gcaggtgcga gtaacacgcc agctccgtcg
     1081 cgccgatgcc ttcggtgatg ctatcgccga tgatcagcgc ccatctcggc cgcgctttgt
     1141 ccggcaccgg ctggctgtcc gcatcgactt gcagacccgc gatccggacg acgttcagcg
     1201 ggctttgtcc cgggctgccc catcgctctt tctgctccga cgactgaacg acgacgtcga
     1261 gttcgtggtc tcccgcgccc ttgagatcat cgatcggaat ttcgttcgca caatccacat
     1321 tcgatttcca gaccccgtcg atggaatacg ccagcttcgg cggcttgaac gtgctcgtgt
     1381 aagtggagac atcgagcaag agcttcgccg ccggcaccgc gttcttcgac ttccacgcca
     1441 cccggaagta agcgccggcg ttccacgcct ggcgaaagac ttttccgccg cgtccttcgt
     1501 caccgatcca gttgcccggc gaaaagacga aggccggtga gtcgacagaa acggtcgtcc
     1561 aggtgggatt ggccgtgggc gcaggaacat ccgcggcggt cagaacggcc agtggcgcca
     1621 ggcagaaaag cgcaagagcg aggtgagttt tcattgggga agtgcgggcg gtcatgttga
     1681 cgcgaagcgg agcggaggca accccttacc aatacaccgc ataaagcgcg gcgagcgcgc
     1741 ccatgaccaa taccgagccg atgacgaacg tggcgcccgg ctggaaatcg gccgcctccc
     1801 aatgcatcgc cttggcgtcg tcaccgggcc ggtgcgtgaa aaggctgatg acaatcatga
     1861 gcgccgcaag aatcagcgtg acccatccca tccggtccat gaacgggaca ttcggcgtcc
     1921 agaacttgaa cgcggcggaa agcgggatcg tgagcaatgc cacggcgagc gcgcccgcgg
     1981 aagtggcgcg cttccagaaa aacccgagca ggaaaatgac gcacaccccg gggctgatga
     2041 agccggtgta ctcctggatg tattggatcg cctggtcgag cttgctgagc tgcggcgcga
     2101 tgagcaccgc gacggtcgcc gacgcgaaaa tggccacccg cccgacgcgg atgagcgtgg
     2161 cttcgcccgc cttcggattc acgtagcgct ggtaaaggtc aagcgtgaag atggtgccga
     2221 tgctattcgc cttgccggcg agggacgcga cgatcgccgc ggtgagc
//
LOCUS       DATAVD010001242         9353 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_865591, whole genome shotgun sequence.
ACCESSION   DATAVD010001242 DATAVD010000000
VERSION     DATAVD010001242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9353
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_865591"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..548)
                     /gene="rbcL"
                     /locus_tag="VHX39_23725"
     CDS             complement(<1..548)
                     /gene="rbcL"
                     /locus_tag="VHX39_23725"
                     /EC_number="4.1.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012569173.1"
                     /note="type III RuBisCO; involved in carbon fixation;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-bisphosphate carboxylase large subunit"
                     /protein_id="HEX3994192.1"
                     /translation="MNKPLDIKITDMKERYTSGVLKYRQMGYWEPDYVPKETDILAVF
                     RLTPQDGVDPEEAAAAIAGESSTATWTVVWTDRLTDSEYYRAKAYRIEPVPGNPEQFF
                     AYIAYDLDLFEEGSIANLTASIIGNVFGFKPLKALRLEDMRIPSHYLKTFQGPATGIV
                     VERERMNIYGRPMLGATMKPKLG"
     gene            668..1654
                     /locus_tag="VHX39_23730"
     CDS             668..1654
                     /locus_tag="VHX39_23730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012569172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3994193.1"
                     /translation="MPNVTVRQLQVFVEAAEMLSFARVAERMRLTPSAVSFQIRQIEA
                     LTGFSLFERIGRRVALTEAGSVLLGYARPVLQTMHDMDAAMLALKGIGNGRVTLGLVS
                     TAKYIVPHIIARFRKRYPGVTVLLREGNRSTIYALLASGAIDFAITGQPPPDLDFKAQ
                     RFAAHPSVIISAPAAAVVQKRKLKPDELRDEWFIVREEGSGTRSLSDAFFRTAGFTPQ
                     IAMETSSNEMIKQAVMAGMGLALISQHTINLELSLGLLSIVPVEGFPVMRHWFGTQRR
                     TSSLLPVHAALHAYLIDQGQTIIDEAASPDRASTRTQQKPPSARQNLPLAPR"
     gene            1766..4168
                     /locus_tag="VHX39_23735"
     CDS             1766..4168
                     /locus_tag="VHX39_23735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994194.1"
                     /translation="MLNRTQYRGDVMGATIAGGTGGNGGTGGTGGTGGVGVDVVAGNL
                     TDDGTIAGGNDGAGGAGGACIGMGVSGLPGFGGIGVSLQSGGTLTDAGLIRGGFGLSG
                     IVDAVYFGGGASRLILDPGASFSGAVVANAAFSNVLELASGASAGTINGLGSQYVGFT
                     QIVVDSGAHWTLNGTDTIAASDPLTVSGAGSLTSKGMLAGGAGAYGGTGGIGIDAAAG
                     SLTNASGATIVGGTGGGGFTGSGGAGGSGVDLTAGSLTNASGAVIAGGAGGTEPVVIN
                     NYGTFGGEISGNGGIGLGLAAGDLTNDGLVTGGYGIRGGIGVDATGGTLINKSTIAGG
                     TGEVGGIGLNATNGSLTNASGGTIAGGVASVDALGFFGVGAAGIELAGGSLTNSGLTN
                     SGLIAGGAAGPGGAGSFGPGNAGGAGGIGVVVAGGSLTNGGTIAAGAGGNGGSSLSVG
                     GTGGGMGVDLTSGSLTNNRVIAGGAGGAGGSGVSSGAGGAGGVGVYLSGGSLTNHGTI
                     AGGAAGNGSGIDSGGGYGVQFQHGGTLIDAGFIAGGSGHLHTTDAVNSDAVYFGAGAS
                     RLILDPGASFEGAVVADAAFSNVLELASAASAGTISGLGTGFVNFATTMIDANAVWTL
                     TGSNTIAAGATLTELSGATLIASGTLLNNGGIVLDPSTMVVGNLLGTGFVTIQAGSTL
                     EVQGSIAATETIVFAGPNAYLHLDSPGNALGSVAGFGPTDTIDLKTVEPTSVVLAGGT
                     LTFGTGAFPLSIGAGDALQSVASADGALLTTEVPCFLTGTLIRTGRGEVPVETLAVGD
                     CV"
     gene            4222..4398
                     /locus_tag="VHX39_23740"
     CDS             4222..4398
                     /locus_tag="VHX39_23740"
                     /inference="COORDINATES: protein motif:HMM:NF024795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hint domain-containing protein"
                     /protein_id="HEX3994195.1"
                     /translation="MARGVRCAATPIKICRGAIADNVPHHDLRVTKGHSLYLDNVLIP
                     VEFLLNHRTILWDD"
     gene            4444..5118
                     /locus_tag="VHX39_23745"
     CDS             4444..5118
                     /locus_tag="VHX39_23745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994196.1"
                     /translation="MLLANGVSAESYRDDGNRGLFQNTNSGWDLSSKPPYAPVLTDGP
                     IVDAVWKRLLDRAGPRPGMPLTDDPDLHLLVDGIRLDACVRSGDFYIFNLCHAPTEVR
                     VVSRAASPQELGLGRDPRSLGVAVRRIVVRQRTLFQNFDADDERLVEGFHVFEADPNI
                     RWTDGDAVVPASLFDGFRGPRNLTLRLGVKPVMSMMALHGKQLDIGQNYENPSWQARD
                     RLPITQ"
     gene            complement(5278..7551)
                     /gene="gspD"
                     /locus_tag="VHX39_23750"
     CDS             complement(5278..7551)
                     /gene="gspD"
                     /locus_tag="VHX39_23750"
                     /inference="COORDINATES: protein motif:HMM:TIGR02517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system secretin GspD"
                     /protein_id="HEX3994197.1"
                     /translation="MNRCLPATLAALAALAGCAPAMKPALEPLPPVSSVAGAASPRID
                     GSVGTPDAMLPAQVSYGTIRTAAASEPNGGGTGDAVLNFADTDIREVVAQVLGNMLKV
                     NYAIDPAVHGTVTFRTVQPLDRAQLLAALQAMLAQSGAALLESGSLYRVVPAGAAAAP
                     ALAGSSAAAGGVVVQLRYASAEDLAKLLQPYAGNSGKIIASPGSNALIVSGEPGAREA
                     LVSLVQAFDINALAGQSYAMLPVPAGSAKDFASALMDAFGSQHGEPLAGVVRAMPMDR
                     VNSVLLVSSQPRYIDAARRIYAMVARTWQETVRNWHVYYLQNSHSDDVAYLLQQAYTP
                     NNVTARPSSHKAAAPGGLMSGQAAGGGSSSLSGLSGGIGGATAPGSGTSLGGVPAAGS
                     QNAPAAGTGGAQQAAADASPLLGGLNGGNNADVSDGIRIIPDEQNNALMIYATPREQE
                     AIVTMLHKVDILPLEVRIDATIAEVTLNDALQYGTQWFFKSGGVNGVLSAASQSLGPA
                     ALAASQLSTSFPGFVIGGHGSGGAPFVLSALQAVTTVHVLSSPEIMVLDNQQASLMVG
                     SLVPYLTGTTTSTLTADAAVTNSINYQPTGVIRQVTPRVNRGGLVTLDVQQQVSSVAT
                     STTAVSGTSGINSPTFNERQVVSRVVVQDGQTVGLAGLITDNVSRSNQGIPWLKDIPL
                     LGFLAGQQANTRTRTELLVLITPHVIHDQQDARALTQDLRDQMSNAAGVPREMQSLPA
                     SGSADPGQRLRRKMHME"
     gene            complement(7767..8162)
                     /locus_tag="VHX39_23755"
     CDS             complement(7767..8162)
                     /locus_tag="VHX39_23755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEX3994198.1"
                     /translation="MVLVSSTYHLPPRVLPSIQAVEGGRVGIFHRNTDGSEDLGVMQV
                     NTLWVPPLSRLTHLSEADVRGRLLDRPCFNIAAAGLILRFYLTETRGDLMRAVGDYHS
                     HTPALNQAYRAEVIHSATMMFTHPGHRAP"
     gene            8426..8854
                     /gene="gspG"
                     /locus_tag="VHX39_23760"
     CDS             8426..8854
                     /gene="gspG"
                     /locus_tag="VHX39_23760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system major pseudopilin GspG"
                     /protein_id="HEX3994199.1"
                     /translation="MLFRNRTKQRDEGFTLLELLVVIAILGLLIGLVAPAALRQLGGA
                     RVSVAHQSIERLSSVLDLYKLDVGLYPTTEQGLQALVERPADVATWNGPYLKGKQTPM
                     DPWNHPYVYSSPSTRSGHDYDLCSHGPPGGAAEQEMICNQ"
     gene            complement(8895..>9353)
                     /locus_tag="VHX39_23765"
     CDS             complement(8895..>9353)
                     /locus_tag="VHX39_23765"
                     /inference="COORDINATES: protein motif:HMM:NF045433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994200.1"
                     /translation="VTEAMSASLAAAIADWRDDSTTVSPGGAKAPQYIAAGKTYGPPQ
                     EPFQSIAEISDVLGMTPDILDRLAPHISIYNAGAPVSTLADPVVAAALRDIAANGALS
                     APPATGSRTIAITATVGGPNGARFIRRAEVRIGTEDGGPAYRILTWTAPN"
BASE COUNT         1583 a         2986 c         3061 g         1723 t
ORIGIN      
        1 ccgagcttcg gcttcatggt ggcgccgagc atgggtcggc catagatgtt catccgttcg
       61 cgctcgacca cgatgcccgt cgccgggcct tgaaatgtct tgaggtagtg ggacgggatg
      121 cgcatgtctt cgaggcgcag cgccttcagc ggcttgaagc caaacacgtt gccgatgatc
      181 gatgcggtca ggttggcgat cgagccttcc tcgaacagat cgagatcata ggctatatag
      241 gcgaagaact gttccggatt acccggcacg ggttcgatcc gataggcctt ggcccggtag
      301 tactcgctgt cggtcaggcg atcggtccag accaccgtcc aggtcgcggt ggaggattcg
      361 ccggcaatcg ctgccgccgc ctcctcggga tcgacgccgt cctgcggggt caggcggaaa
      421 accgcgagaa tgtcggtttc tttcgggacg taatccggtt cccagtatcc catctgccga
      481 tacttcagaa cgccggaggt atagcgttcc ttcatgtccg tgattttgat gtcgagtggt
      541 ttgttcattg gcccctcctt ccgagacatg cggctggtct cccgcatcac cttcacatac
      601 ggcctggact tgacgagcaa aagcaaaata gactgtctgg aatcacaagg gatccctcgt
      661 cgataaaatg cccaatgtta ccgtccgaca attgcaggtg ttcgttgagg cggcggagat
      721 gctgtcgttc gcccgggtcg ccgaacgaat gcggcttacg ccatccgcgg tctccttcca
      781 gatccggcag atcgaggcct tgaccggatt ttccctgttc gaacggattg gccgccgggt
      841 cgcactgacc gaggcggggt cggtattgct gggttatgcg cgccccgtgt tgcagaccat
      901 gcatgacatg gatgccgcca tgctggcgct gaagggaatt ggcaacggac gcgtgacgct
      961 gggcctggtg tcgacggcga aatacatcgt tccccatatc atcgcgcggt ttcggaaacg
     1021 atatccgggg gtgaccgtcc tgcttcggga gggcaatcga tccacgatct acgcacttct
     1081 ggcgagcggc gcgatcgact tcgccatcac cgggcaaccc ccgcccgacc tcgacttcaa
     1141 ggcgcaacgg ttcgcggccc atccttcggt cattatttcc gccccggccg ctgcggtcgt
     1201 ccaaaagcgc aagttgaaac ctgatgaatt gcgtgacgag tggtttatcg tgcgtgagga
     1261 agggtcaggc acgcggtcgt tgtcggacgc gttttttcgg accgccggct tcaccccgca
     1321 gatcgcgatg gagacgtcga gcaacgaaat gatcaagcag gccgtgatgg ccggcatggg
     1381 gctcgctttg atctcgcaac atacgatcaa tcttgaattg tccctcggtc tgctttccat
     1441 agtgccagtc gaggggttcc cggtgatgcg ccactggttc gggactcagc gccggacgtc
     1501 gtcgttgctg ccggtgcacg ctgcgttgca cgcctatctc atcgaccagg gacagaccat
     1561 catcgacgag gccgcatcgc cagaccgtgc atcgacgcga actcagcaga agccaccttc
     1621 agcccgtcaa aatttgccgc ttgctcctcg gtaggttgac ctcgtggttt ggtacaaagc
     1681 gccgcggcgg cgatcggccg aaccgcagga ttcgcagacc ggccgacgcc agaaattgga
     1741 acggcgccac gggcggagcg ccggcgtgct gaaccgtacg cagtaccgcg gtgacgtgat
     1801 gggcgcgacg atcgccggtg gcacgggtgg caatggcggc acgggcggca cgggcggcac
     1861 cggcggcgtc ggtgtcgatg tcgtggccgg caacctgacc gacgacggca cgatcgccgg
     1921 tggtaacgac ggcgcagggg gcgccggcgg cgcttgcatc ggcatgggcg tgtccggtct
     1981 cccaggcttc ggtggcatcg gtgtgtcgtt gcaaagcggc ggaacgttga ccgacgcggg
     2041 tctgatccgc ggcggtttcg gcctttccgg catcgttgac gcggtctatt tcggcggcgg
     2101 ggcgtccagg ctgatcctcg accccggcgc ctcgttcagc ggtgccgttg tcgccaacgc
     2161 ggcgttcagc aacgtactgg aactggcatc cggcgcgagc gcgggaacga tcaatggcct
     2221 cggctcccag tacgtcggct tcacgcaaat cgtcgtggac agcggcgccc actggacgct
     2281 gaacggcacc gacaccattg ccgcgagcga tccgctcacg gtctccggtg ccggcagtct
     2341 gaccagcaag ggcatgttgg ccggcggggc cggcgcctac ggcggcaccg gtggcatcgg
     2401 tatcgatgcc gcggccggca gcctgaccaa cgcttcgggc gcgacgattg tcggtggcac
     2461 cggtggcggc ggcttcacgg gttccggcgg cgccggcggc agcggtgtcg atctcacggc
     2521 cggtagcctc accaatgcct cgggcgcggt gatcgccggc ggcgccggcg gtactgagcc
     2581 cgtcgtcatc aacaactatg gcacttttgg cggcgaaatc agcggcaacg gcggcatcgg
     2641 cctcggcctc gcggccggcg accttaccaa cgacggactg gtcaccggcg gctatggcat
     2701 cagaggcgga atcggcgtcg atgccacggg cggcaccctc atcaacaaga gcacgatcgc
     2761 cggtggcacc ggtgaagtcg gtggcatcgg cctcaacgcc acgaacggta gtctcaccaa
     2821 cgcgtcaggc gggaccatcg ccggcggcgt ggcttccgtt gacgccctgg gctttttcgg
     2881 cgtcggcgcc gcaggtatcg agctcgcggg cggcagcctg accaactctg gcctgaccaa
     2941 ctctggcctg atcgccggcg gcgcggccgg acccggcggc gctggcagct ttggccccgg
     3001 taacgctggc ggcgccggcg gcatcggcgt cgtcgtcgcg ggcggcagcc ttaccaacgg
     3061 cggcacgatc gcggccggtg ccggcggcaa cggcggttca tccctgagcg tcggcggcac
     3121 cggcggcggc atgggcgtcg atctcaccag cggcagcctg accaacaacc gcgtgatcgc
     3181 cggcggcgcg ggcggtgccg gcggtagcgg cgtctcctcc ggcgccggtg gtgccggagg
     3241 cgtcggcgtc tatctctcgg gcggcagcct gaccaaccac ggcacaatcg ccggcggtgc
     3301 cgctggcaac ggcagcggca tcgactcggg cggtggctac ggcgtgcaat tccaacacgg
     3361 cggaaccctg atcgacgcgg gcttcatcgc cggcggcagc ggccacctcc acaccaccga
     3421 cgcagtcaat tccgacgcgg tctatttcgg tgccggcgct tccaggctga tcctcgatcc
     3481 cggcgcgtcg ttcgaaggcg cggtcgtcgc cgacgcggcc ttcagcaacg tgctggaact
     3541 ggcgtccgct gccagcgcgg gcacgatctc tggcctcggc acggggttcg tcaacttcgc
     3601 aacgaccatg atcgatgcca acgccgtctg gacgctgacc ggcagcaaca cgatcgccgc
     3661 cggcgcgaca ctgaccgagc tctccggcgc gacgctgatc gcttccggaa cgctgctgaa
     3721 caatggcggc atcgtgctcg accccagcac catggtggtg ggcaatctgc tcggcaccgg
     3781 cttcgtcacg atccaggcag gttcgacgct ggaggttcag ggctcgatcg ccgccaccga
     3841 aacgatcgtg ttcgcgggac cgaatgctta tctgcacctt gactccccgg gcaacgcgct
     3901 cggttccgtc gccggcttcg gtcccaccga caccatcgac ctgaaaaccg tcgagcctac
     3961 ctcggttgtt ctggccggcg gcaccctgac attcggcacc ggcgctttcc cactgtccat
     4021 cggcgccgga gacgcgctgc aaagcgtggc gagcgcggat ggtgctttgc tcaccaccga
     4081 ggtgccctgc tttcttaccg gcacccttat acgaacgggc cgcggagaag tgccggtgga
     4141 gacgctggcc gtgggtgact gtgtttgaca ctctcaggcg aggtgaagcc aatcgtatgg
     4201 attggtctgg gacatcgatt ggtggcgcgc ggcgttcgtt gcgcggccac gccgatcaaa
     4261 atctgccggg gcgccatcgc cgacaacgtg ccgcaccacg acctgcgcgt caccaagggc
     4321 cattctctct acctcgacaa tgtgcttatc ccggtggagt tcctgcttaa tcaccgcacg
     4381 attctctggg acgactgagc gcaggcggta accgtttacc acattgagct ggagacgcat
     4441 gatgtgcttc tcgcaaacgg cgtatcagcc gaaagctatc gtgacgatgg caatcgcggg
     4501 ctgttccaga acaccaacag cggctgggat ctgtcgtcga agccgcccta tgcacccgtg
     4561 ctgacagatg gcccgattgt cgatgcggtg tggaagcggc tgctggaccg agccgggccg
     4621 cggccgggca tgccgctgac ggatgatccc gatctgcatc ttctggtcga tggcatacgc
     4681 ctggacgcct gtgtgcggtc tggtgatttc tacatcttca atctctgcca tgcgccgacc
     4741 gaagtacggg ttgtctctcg cgcggcgtcg cctcaggaat tgggcctggg acgtgatccg
     4801 cggtcgctcg gcgtggccgt gcgtcgaatt gtcgtgcggc agaggacgct gttccagaac
     4861 ttcgacgctg acgacgagcg gctcgtcgag ggcttccacg tgttcgaggc ggatcctaat
     4921 attcgctgga ccgacggcga cgcagtcgtg ccggcgtcac ttttcgacgg ttttagaggt
     4981 ccgcggaatt tgacgctgcg gctgggagta aagccagtta tgtcgatgat ggcgctgcac
     5041 ggcaagcagc ttgatattgg ccagaactac gaaaatccct cctggcaggc acgagaccgt
     5101 ttgccgatca cgcaatgaaa agtcagtcag gaacctgtcg tccggcaata tgccgtcact
     5161 gttgccaatg tctggagcac gtcgccggtt cgttccattt tgcgtggcac gctggcgacg
     5221 cggtctccgc aatacctcaa ggactgcctt tcgtaacgat gggacaccgt cgctccatca
     5281 ttccatatgc atctttctgc gcaggcgctg ccccggatcg gcggaccccg acgcgggcaa
     5341 agactgcatt tcccgcggca cgccggccgc gttgctcatc tgatcgcgaa ggtcctgggt
     5401 cagggccctg gcgtcctgct gatcgtggat cacatgcggc gtgatcaaca ccagcagttc
     5461 cgtccgggtg cgggtattgg cctgctggcc ggccagaaaa ccgagcagcg ggatgtcctt
     5521 cagccaggga atgccctggt tgctgcggct gacattgtcg gtgatcaacc cggccagccc
     5581 gacggtctgg ccgtcctgca cgaccacgcg tgacacgacc tgacgttcgt tgaacgtcgg
     5641 cgagttgatc ccggaggtgc ccgatacggc cgtggtcgaa gtcgcgacgc tgctgacctg
     5701 ctgctgcaca tccagcgtga ccaggccgcc gcggttcacc cgcggcgtca cctgcctgat
     5761 gaccccggtg ggctggtagt tgattgagtt ggtgacggcg gcatccgcgg tcagggtgct
     5821 tgtcgtggta ccggtcagat agggcaccag gctgccgacc atcagtgacg cctgttgatt
     5881 gtccagcacc atgatttccg gcgatgacag gacatgcacg gtagtgaccg cctgcagcgc
     5941 ggacagcacg aacggggcac cgcccgaccc gtgcccgccg atgacgaagc caggaaaact
     6001 tgtgctcaac tgcgaggcgg cgagcgcagc cggacccagc gactgcgacg ccgcgctgag
     6061 aacgccgttc acgccgccgg atttgaagaa ccactgggtg ccgtattgca gcgcgtcgtt
     6121 cagcgtcacc tcggcgatgg tggcatcgat gcgtacttcc agcggcagga tatcaacctt
     6181 gtgcagcatc gttacgatcg cctcctgctc gcgcggggtg gcgtagatca tcagggcgtt
     6241 gttctgctcg tccggaatga tgcgtatgcc atccgaaacg tcggcgttgt tgccgccgtt
     6301 cagtccaccc agcagcgggc ttgcatccgc tgccgcctgt tgcgcgccgc cggtgcccgc
     6361 ggccggggcg ttttgcgacc cggccgcggg cacaccgcca agggacgttc cgctgcctgg
     6421 cgccgtggca ccgccgatgc cgccggacag gccgctcaac gatgatgagc cgccaccggc
     6481 tgcctggccc gacatcaggc cacccggcgc tgccgccttg tggctgctgg gccgcgccgt
     6541 gacgttgttc ggcgtgtagg cctgttgcag caggtaggcg acatcgtcgc tatgactgtt
     6601 ctgcaggtaa tagacgtgcc agttgcgcac agtctcctgc caggtccgcg cgaccatcgc
     6661 gtagatccgg cgcgcggcgt cgatgtagcg cggctggctc gacaccagca gcacgctgtt
     6721 cacccggtcc atcggcatcg cacgcacgac ccccgccaga ggctcgccgt gctggctgcc
     6781 gaacgcgtcc atcaatgcgg aggcaaaatc cttcgcgctg cccgccggaa ccggcagcat
     6841 cgcataggac tggcccgcca aggcgtttat gtcgaacgcc tgcacaaggc taacgagcgc
     6901 ttcacgagca cctggctcgc cactgacgat cagcgcgttg ctgccggggc tggcaatgat
     6961 cttgccgctg tttccggcat agggctgcaa cagcttggcg agatcttcgg cggaggcata
     7021 gcgcagttgc acgacgacgc cgcccgccgc cgcgctgctg ccggcgagcg cgggcgcggc
     7081 cgcggcaccc gccggcacga cgcgatatag cgaacccgat tccagcagcg ccgcgccgct
     7141 ctgggcaagc atcgcttgta gcgcggcaag cagttgcgct cggtcgagcg gctgaaccgt
     7201 gcggaatgtc accgtgccat ggacggcggg atcgatcgcg tagttgacct tcagcatgtt
     7261 gccgaggacc tgcgccacga cctcccttat atccgtatcg gcgaaattga gcacggcatc
     7321 gcccgtccca cccccgttcg gctcgctcgc ggcggcggtt cgtatcgtcc catatgaaac
     7381 ttgtgccggt agcatggcgt ccggtgtgcc gacgctgccg tcgatccgcg gggatgcggc
     7441 gccggccacg ctcgaaaccg gcggcagggg ctccaatgcg ggtttcatcg ccggcgcgca
     7501 gcccgcgagt gccgccagag ccgccagcgt cgccggtaaa catcggttca cgtgcaatat
     7561 cctacaagat cgtcccggct tcggccttcg ggatgggtaa gctggatgcc tccggcgggg
     7621 tcaaagccgt gaagggcgcg aggacctgac cgcctcggcc ggccgcggtc gcctgggagg
     7681 aaaggaacac gttcaaaccc gtatcccaaa cctccaacca gggtctcggg cgcttgggtg
     7741 ctgcacggtg ggcgatacat ctcgcgtcac ggcgcacgat gcccggggtg cgtaaacatc
     7801 atggtagcag aatggataac ctcagcccga taggcctgat tgagggcggg cgtgtgcgaa
     7861 tgatagtcgc cgaccgcccg cataagatcg ccccgggtct ctgtcagata gaagcggaga
     7921 ataaggccgg cggccgcaat attgaaacac ggccggtcga gcaggcggcc gcgtacatcc
     7981 gcctcgctga gatgcgtcag gcgggacaaa ggcggcaccc acagcgtgtt gacctgcatc
     8041 acgccgagat cttcggaccc atccgtgttc cggtgaaaga tcccgactcg gccaccctcc
     8101 acggcctgga tcgagggcaa tacgcgcggc ggaagatgat acgtcgacga gacgagaacc
     8161 atgcaggtca caaacggtat cacaatggca cagcgtcctc tgtccggcgc gatgggtcgt
     8221 cgtcagacgc ccgcaatgtc acggagcaac ggcgccccgg gtattccatc cacgcggtat
     8281 atcgcagccg gtgtccgggg aaaacacttc gttctgtatt agggacaact tgtcaccaga
     8341 ctgacacttg ccgcgccgtg cttgccgcgc ctacagggac gccgttgata tggggtcgtt
     8401 ccggtttgat atgcgtgata gtccgatgtt atttcgaaat agaaccaaac aacgggatga
     8461 ggggtttacc cttctggagc ttctggtcgt catcgcgatt ctgggtttgc tgatcggttt
     8521 ggtcgcgccc gcggcattgc gccagcttgg cggtgcgcgc gtctcggtcg cccaccagtc
     8581 gattgaacgc ctgtcatcgg tgctcgatct ctacaagctg gacgtcggac tttatccgac
     8641 gaccgaacag gggctgcagg cgctggtcga gcgtccggcg gatgtcgcga cgtggaatgg
     8701 tccctatctg aagggcaagc agaccccgat ggacccgtgg aaccacccgt acgtctatag
     8761 cagcccgtcg acacgaagcg gccatgacta tgacctgtgc tcgcacgggc cgccgggcgg
     8821 cgcggcggaa caggaaatga tctgcaacca ataggccgta tgatgccgtt gccttgaacg
     8881 tttcgccggc ctcatcaatt cggcgcggtc caggtcagga tgcggtaagc cgggccacca
     8941 tcttccgttc cgatccggac ctccgcgcgc cggatgaatc gcgcgccgtt cggcccgccg
     9001 acggtcgccg tgatcgcgat cgtgcgtgat cccgttgcgg gcggtgcgga taacgcaccg
     9061 ttcgcggcaa tatcacgcag tgccgccgcg acgacagggt ccgccaaagt cgataccggg
     9121 gcgcctgcgt tgtagatcga gatatgcggt gccagccggt ccaggatgtc tggcgtcatt
     9181 cccaggacat ccgatatctc ggcgatgctt tggaacggct cctgtggcgg cccgtaagtc
     9241 ttgccggccg cgatatattg cggggctttg gcacccccgg gagaaacggt cgtgctatcg
     9301 tcgcgccaat cggcgatggc ggccgcgagt gatgcggaca tcgcctccgt gac
//
LOCUS       DATAVD010001243         2229 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2165210, whole genome shotgun sequence.
ACCESSION   DATAVD010001243 DATAVD010000000
VERSION     DATAVD010001243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2165210"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..315
                     /locus_tag="VHX39_23770"
     CDS             <1..315
                     /locus_tag="VHX39_23770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994201.1"
                     /translation="GLVGTGVVSGASLPVFHRTPLDMVVSAATGRDCSVVNLDKDERY
                     CRPKDRAPVTPEFCTRSLGTRDCWDDPSKLLNHPHEIADGPRALTEDQEADRTKRWPW
                     LW"
     gene            1000..2142
                     /locus_tag="VHX39_23775"
     CDS             1000..2142
                     /locus_tag="VHX39_23775"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX3994202.1"
                     /translation="MAKYIIAGLGGLLCLVVLAVWQLSPRGGASAAHAQTAPQQVPVT
                     AGVVVAQDVPQYLQGIGTVQAFNSVAVKSRVDGAIIKVAFTEGQEVKTGDLLIQIDPA
                     PYQAGLALATANKEKDEAQLATAQADLVRYGKLVGSGYQTRQSFEQQQGMVAQLQAAI
                     KGDQAQIDTAHLNLGYTELRSPIDGRLGARLVDIGNLVRATDNVSLVSITQLKPIFVS
                     FTLPQDNLDPIRDEQRKAPLDVVAFASDGQTQLGVGKLTLIDNMIDQATGTIHLKATF
                     ANADERLWPGEFVNLRVILRIRHDVATVPAQTVQDGPDGHYAYVISKNDTVERRTVKV
                     SAVQDGIAVIDKGLTPGERIVVEGQFRLTGGARIRALDAKPTGSAG"
BASE COUNT          447 a          672 c          681 g          429 t
ORIGIN      
        1 gggctggttg gaacgggcgt tgtttccggg gccagccttc cggtcttcca ccgcacgccg
       61 cttgacatgg tggtgtcggc ggcgaccggg cgggactgct cggtggtgaa cctggacaaa
      121 gacgaacgtt actgccgtcc caaggatcgc gccccggtga cgccggaatt ttgcacccga
      181 tccctcggta cgcgcgactg ttgggacgat ccgtcgaaat tgctgaacca tccgcatgag
      241 atcgctgacg gcccgcgcgc gctcaccgag gatcaggaag ccgaccgcac gaagcgctgg
      301 ccctggcttt ggtgagggag cgaggccaag ggtccatcag gtcgcaaact accagcaatg
      361 acccgttctc ttcaacggcg tgggcagcat gcgcgcgagt gccaaggtgt attttacacc
      421 ggccccggac gaagttctcc ggcgcatcgg tgatcgtgct gcattcagat ttctccgtcc
      481 gcatgtggga ggcgacaggc tgcgcgccat tgctcgtgac cgggccgtaa cctgcagccg
      541 cgcgccagcg tgtcgatggg gatcgcaaga aatacaccgt cggaccgccg cgcaacatcg
      601 ctctcgtcgg taattcggca tttttacata acttcatgtt ttcgtgcgag agcgcgaata
      661 ccgcacgcga ggcacaagtc atgaattttt gcggtccccg gtctatttcc cgtaacggcg
      721 tcgtaatccc agcctgcttc cggcggcttt aagtaaagca attccgcatt gagttctttc
      781 gttacattac tctaccgcgg ctgcgcgatg aaatttgggc aacaagacta acgtagcaat
      841 atagattggc cggtaccaac caaatatggt tgactgccga cgcttgcggc ctcacgctac
      901 ccggcgcagg aaggccgggc gcgtctgcgc ctgggcatcg cccgccgggc aaccgtgcgc
      961 acgctgttta tcagccggaa tcggctcggg gagttaagaa tggcgaagta cataatcgcc
     1021 ggtctgggtg ggttgttgtg tctcgtggtg ctggcggtgt ggcagctttc cccccgtggc
     1081 ggcgcatcgg ctgcgcatgc gcaaactgcc ccgcaacagg tgcctgtcac tgccggagtc
     1141 gttgtcgcgc aggacgtgcc gcaatacctg caggggatcg gcaccgtgca ggcgttcaac
     1201 tccgttgcag tcaagagccg ggtcgacggc gccatcatca aggtcgcatt cacggaaggc
     1261 caggaggtca agaccggcga cctgctgatc cagatcgacc cggcccccta tcaggctggg
     1321 ctggctctgg cgaccgccaa caaagagaag gacgaggctc aactcgcaac cgcacaggcg
     1381 gatctcgtcc gctatggcaa gctggtcggt tccggatacc aaacgaggca aagcttcgag
     1441 caacagcaag gcatggtggc ccagttgcag gcggcgatca aaggcgatca ggcgcaaatc
     1501 gacactgccc atctcaatct cggctatacc gagctgcgtt cgccgatcga cggccgcctc
     1561 ggcgcccgcc tggtcgacat cggcaatctt gtacgcgcca cagacaatgt ctccctggtc
     1621 tcgatcaccc agttgaagcc gatcttcgtc agcttcacct tgccgcagga caatctcgat
     1681 ccgatccgag atgaacaaag gaaagcgccg ttggatgttg tggcatttgc cagtgatggg
     1741 caaacccaac tcggtgtggg caaactcacc ctgatcgaca acatgatcga ccaggcgacc
     1801 ggcacgatcc atttgaaagc gacctttgcc aatgcggacg agcgcctatg gcctggcgag
     1861 ttcgtcaatc ttcgcgtgat cctgcgcatt cggcacgacg ttgccacggt gccggcacaa
     1921 acggtgcagg atggtccgga tggccactac gcctatgtca tcagcaagaa cgacacggtc
     1981 gaacggcgga cggtgaaagt ctctgcggta caggacggta tcgcggtgat cgacaaaggc
     2041 ctcacgccgg gcgagcgcat tgtggtcgag ggccaattcc ggctgaccgg cggtgcgcgg
     2101 atcagggcgc tggatgcaaa accaaccgga tcggcgggtt gaggccaagg aataccaatg
     2161 agcatttcag aacccttcat tcgccgtccc attgccacat cgcttctcat gctcggcgtg
     2221 ctggtattt
//
LOCUS       DATAVD010001244         4908 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_490254, whole genome shotgun sequence.
ACCESSION   DATAVD010001244 DATAVD010000000
VERSION     DATAVD010001244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4908
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_490254"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(9..1790)
                     /locus_tag="VHX39_23780"
     CDS             complement(9..1790)
                     /locus_tag="VHX39_23780"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX3994203.1"
                     /translation="MFTTRPEIAGTFGVVASTHWLASSTGMAVLERGGNAFDAAVAAA
                     FVLQVAEPHLNGPGGDAPIILHDAKAGQQRVICGQGPSPRAASIEAFQHLGLDLVPGT
                     GLLPAVVPGAFDAWCLLLRDWGTWEFADVLSFALGYARNGVHLVPRISATIESMRPLF
                     QTEWKSSAAVYLPGGAVPGPHTLFARPAMADTWDRLCGEATGATREARIDAVRRAWYQ
                     GFVADQVDRFFRGNEVLDVSGRRHRGLLTAQDFSQWSATVEDPVRYDYHGHSVLKCGP
                     WSQGPVFLQQLALLREVDIGAMDPLGADFVHTVVESGKLAFADREAYYGDPNFCRVPM
                     AELLSDQYNAERRQLIAATASMALRPGSISGFAADVDRDGAARSRLLADDAGGAGEPT
                     VARLGVIGADTCHIDVIDKHGNMVSATPSGGWLQSSPAVPGLGFPMGTRGQMFWLKPG
                     LPNSLEPGKRPRTTLSPSFALRDGKAWMAFGTPGGEQQDQWALILFLRMVHHNMTIQE
                     AIDVPSFHTEHWPSSFWPRVARPGKVIIEGRYADAVLHDLASRGHDVSKGEDWSEGRL
                     SGARLEPDGQMFAGANPRGMQGYAVGR"
     gene            1866..2396
                     /gene="phnN"
                     /locus_tag="VHX39_23785"
     CDS             1866..2396
                     /gene="phnN"
                     /locus_tag="VHX39_23785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism
                     protein/1,5-bisphosphokinase (PRPP-forming) PhnN"
                     /protein_id="HEX3994204.1"
                     /translation="MLVLVVGPSGAGKDTLLNAAKDAFSDDPRVHFVRRVITRPADPD
                     GENHEPVTEAEFAARDFALSWSAHGLRYGIPSADTAPVVVANVSRGVIATAAEQYPVR
                     VIEVTASPEILARRLAGRGRETAADVALRLGRTVVIPGGVAIETVWNDATLAIGVERF
                     VAALRRVMDAATQDQN"
     gene            complement(2413..2988)
                     /locus_tag="VHX39_23790"
     CDS             complement(2413..2988)
                     /locus_tag="VHX39_23790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1045 domain-containing protein"
                     /protein_id="HEX3994205.1"
                     /translation="MTQPDIPGIDEVTAEARGYGFHATLKPPMRLTDSCSWDELLIAT
                     KELAAQSTPFELPRLAVTNLHGFLALCEVAFCSPLQALADACVERLDRFRAPPPEAEL
                     ARRRRAQLTAAQEAMLVRVGYPYVLNTWFFHMTLTRRLSAAEHAIWRPAVERYFEEAA
                     AMRRTVTDICLFTQAGPGKPFVIAERIALAG"
     gene            complement(3096..4235)
                     /locus_tag="VHX39_23795"
     CDS             complement(3096..4235)
                     /locus_tag="VHX39_23795"
                     /EC_number="3.6.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0019700 - organic phosphonate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate diphosphatase"
                     /protein_id="HEX3994206.1"
                     /translation="MNAETIFSNAVLVTPDEVLLGSLTMRDGTITEISAGRSSAPGAI
                     DLDGDYLIPGVVDVHTDNLERQVLPRSLARWPSRSAMVAHDAQCAAAGVTTILDALCL
                     GDLGFDAGRIQTFRDGVADLDALTPTGLLKSQHYLHLRCEIPALDTLDCLDLVADHPL
                     VRMISLMDHSPGVGQYANLDFYRELRRRGGLDEASVDRRIAELQEQRARVREPNRKSL
                     LDRVRGRGIALASHDDRTVEEIAENARDGICISEFPVTMAAAEAAKAAGMDVIAGAPN
                     VVRGGSHSGNIAAADLLREGWVDVFASDYVPPALIEAAFRCVRDGLAELPQAVGMITW
                     RAAELAGLPDRGRLAEGQRADLVRVRVHETLPVVRQVWNGGDRVI"
     gene            complement(4232..4903)
                     /gene="phnL"
                     /locus_tag="VHX39_23800"
     CDS             complement(4232..4903)
                     /gene="phnL"
                     /locus_tag="VHX39_23800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013641102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018835 - carbon phosphorus lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnL"
                     /protein_id="HEX3994207.1"
                     /translation="MSKSFTLHLRGGLRLPVLGSVDLSVDAGECVVLSGPSGAGKSTL
                     LRSLYGNYRADTGRILVQHLGSTVDIASADPRTILAVRQHTMAYVSQFLRVVPRVPAL
                     DIVAEALLGREPSADAAREQAAAMLLALNIPRRLHSIPPATFSGGEQQRVNLARGFIT
                     GHPILLLDEPTASLDADNRAVVVRMIQEAKARGTAIVAICHDLDVRDRIADRLFPVQP
                     YREAA"
BASE COUNT          953 a         1618 c         1509 g          828 t
ORIGIN      
        1 gtccgcattc aacgacccac cgcgtagcct tgcatccccc tcgggtttgc gcccgcaaac
       61 atttggccgt ccggttccag ccgggcgccg gacagacggc cttcactcca gtcctcgcct
      121 ttgctgacgt cgtggccgcg cgatgcgagg tcgtgcaaca ctgcatccgc gtaacgacct
      181 tcgatgatca ccttgcctgg tcttgcgacc cgtggccaaa aactgctcgg ccaatgttcg
      241 gtatgaaacg atggtacgtc gatcgcttcc tggatggtca tgttatggtg gaccatacgc
      301 aggaacagga tcagcgccca ttgatcctgc tgctcgccgc ctggtgtgcc gaacgccatc
      361 catgctttgc cgtcgcgcag cgcgaaactc ggcgacaacg tggtgcgtgg gcgcttccct
      421 ggctccagcg agttcggcag gcccggcttc aaccaaaaca tctggcccct tgtgcccatc
      481 ggaaagccca ggcccggaac cgcgggcgag gattgcagcc agccgccgga gggcgtggca
      541 ctgaccatgt tgccgtgttt gtcgatcaca tcgatgtggc acgtatccgc accgatcacc
      601 ccgagacggg cgacagtcgg ctcgcccgcg ccacccgcat cgtcggcgag caaccggctg
      661 cgcgccgcgc catcacgatc cacgtcggcc gcaaaacccg agatcgaacc aggacgcaat
      721 gccatcgacg cggtcgcggc aatcagctgc cggcgttcgg cgttatattg atcggacaac
      781 aattctgcca tcgggacccg gcagaaattc ggatcgccgt agtacgcttc gcgatccgca
      841 aacgccagtt ttccggactc taccaccgtg tggacgaagt cggcgcccag cgggtccatc
      901 gcaccgatat cgacctcgcg caacaatgcg agttgctgca agaacaccgg accctggctc
      961 cagggaccgc atttcagcac gctgtggccg tgatagtcgt aacggaccgg gtcttccacc
     1021 gtcgccgacc attgcgaaaa atcctgggcg gtcagcagac cgcggtggcg acggccgctg
     1081 acgtcaagca cctcgttgcc gcggaagaaa cgatcgacct gatcggcaac aaacccctga
     1141 taccaggcgc gccggaccgc atcgatgcgg gcttcccggg ttgcaccggt ggcctcaccg
     1201 cacagccggt cccaggtatc ggccatggca ggccgggcga acaaagtgtg tggtccaggc
     1261 actgcgccgc caggtaggta gacggcggcg gaacttttcc attcagtttg gaacaacggc
     1321 cgcatgctct cgattgtcgc cgagatgcgc ggtaccagat ggacaccgtt gcgggcgtaa
     1381 ccaagtgcga aggacagaac gtcggcgaac tcccacgtgc cccaatcgcg cagcagcaga
     1441 caccaggcgt caaatgcacc gggcacaacg gccggcaaca aaccggtccc gggaaccaga
     1501 tcaagtccca gatgctggaa tgcctcgata gaggcggcgc gcggggaggg cccctggccg
     1561 cagatcaccc gctgctgccc cgctttcgca tcatgcaaaa tgattggcgc atcgccgcct
     1621 gggccgttca aatgcggttc ggcgacctgc aggacgaaag cggcggccac cgcggcatca
     1681 aaggcgttgc cgccgcgttc caacaccgcc atgccggtgc tgctggccag ccagtgcgtg
     1741 ctggcgacaa ctccgaacgt tccggcgatc tccggacgcg tggtgaacat ggcggtaaac
     1801 tccagcgttg cttcgggggg caaggtaacc ccatgctggc caggctgaaa gccgaggaga
     1861 tatgaatgct ggtgctggtg gtcggcccaa gcggcgcagg caaggatacg ttgctgaacg
     1921 cggccaaaga tgcgttcagc gacgatccac gcgttcattt cgttcgcaga gtgattaccc
     1981 ggccggccga tcccgacggc gaaaaccacg aaccggtgac cgaagcggag ttcgccgcac
     2041 gggatttcgc gttgtcgtgg tcggcgcatg gcctgcgtta tggcattcca tctgccgaca
     2101 cggcgcctgt ggtggtcgcc aatgtctcgc gtggcgtgat cgcgacggcc gcggaacagt
     2161 acccggtccg cgtgatcgag gtcaccgctt cgcccgaaat tctcgccagg cgactggcag
     2221 gacggggccg cgaaaccgcc gccgatgtgg cgctccgtct tggccggacc gtggtgatcc
     2281 cgggtggtgt agcgatcgaa acggtgtgga atgatgcgac attggcgata ggcgtagaac
     2341 ggttcgtcgc cgcgttgcgt cgtgtcatgg atgcagcgac acaagaccag aactagccga
     2401 acaccgcgga tcttaccccg ctaacgcgat ccgttccgcg atcacgaacg gcttccctgg
     2461 gcctgcctga gtaaacaagc aaatatccgt cacggtgcgc cgcattgcgg ccgcttcctc
     2521 gaaataccgt tccaccgctg ggcgccagat tgcgtgctcc gcggcagaca gccgccgcgt
     2581 caaggtcatg tggaaaaacc acgtgttcag cacataggga tagccaaccc gaaccagcat
     2641 cgcttcctgt gccgcggtta gctgagcccg ccgccgccga gccagttccg cctccggcgg
     2701 tggcgcgcga aaccggtcca atcgttccac acacgcatcg gccaatgcct gcaatggcga
     2761 acaaaacgcc acctcacata aggccaggaa cccatgcagg tttgtgaccg cgaggcgcgg
     2821 taattcgaac ggcgtgctct gtgctgccaa ttcctttgtc gcgatcagca actcatccca
     2881 cgaacagctg tccgtcaggc gcatcggcgg tttcaaggtc gcgtgaaagc cgtagcccct
     2941 ggcttcggca gtgacctcgt cgattccggg gatgtccggt tgcgtcattc ggtcttcacg
     3001 ggtggggtcg cggcccaacc atgccgcacc ggcggcgaat aacggatcat cttcgcgcgg
     3061 gcagtaataa actccaaccc ttgcgtccgg gtgcatcaga tcacccggtc cccgccgttc
     3121 cacacctgac ggaccacagg cagcgtctca tgcacccgca cccggaccag atcggcgcgc
     3181 tgaccctcgg cgagacgccc gcggtccggc aggccagcca gctccgccgc gcgccatgtg
     3241 atcatcccca ccgcttgcgg caactccgcc aggccgtccc gcacgcaacg gaacgcggcc
     3301 tcgatcagcg cgggcggcac atagtcggag gcgaatacat cgacccatcc ctcgcgcagc
     3361 agatcggccg ctgcaatgtt gccggaatga gagccgcccc gcaccacatt cggcgcgccg
     3421 gcgatgacgt ccatgccggc cgccttcgct gcttcggctg ctgccatcgt gaccgggaat
     3481 tcgctgatgc agataccatc ccgagcgttt tccgcgattt cttcgaccgt gcggtcgtca
     3541 tggctggcca aagcaatgcc tcggccgcgt acgcggtcaa gcaacgattt tcgatttggc
     3601 tcgcgcaccc gtgcgcgctg ttcctgcaac tcggcgatgc ggcgatcgac cgacgcttca
     3661 tccaggccgc cgcgacgacg cagttcgcgg taaaagtcga gatttgcgta ctgtccgact
     3721 ccgggactgt gatccatcag gctgatcatc cgcaccaggg gatgatcggc gaccaaatcc
     3781 aggcaatcca gcgtgtccaa cgctgggatt tcacaacgca gatgcagata atgttgcgac
     3841 ttcagcaagc cggtcggcgt cagtgcgtcc aggtcggcaa cgccatcccg aaatgtctgg
     3901 atccgtccgg catcgaaccc cagatcgcca aggcaaagtg cgtccagaat ggtggtcacg
     3961 ccggcggcag cacactgcgc gtcgtgcgcc accatcgccg aacgcgacgg ccatcgcgcc
     4021 aggctgcgcg gcagcacctg ccgctccaga ttatcggtat gcacgtcaac gacgcccgga
     4081 atgagatagt caccgtcgag atcgatcgca cccggcgccg acgaacgtcc ggccgaaatt
     4141 tcggtgatcg taccgtcgcg catcgtcaaa gagcccagaa gaacttcgtc aggcgtcacg
     4201 aggacggcat tggagaaaat cgtttcggcg ttcatgcggc ctcgcgatac ggctggacgg
     4261 ggaacaatct gtcggcgatc cgatctcgca cgtccaggtc gtgacagatg gcaacaattg
     4321 cggtgccgcg cgctttggcc tcctggatca tgcgcaccac gaccgcccgg ttgtcggcgt
     4381 cgagtgacgc agtgggttcg tccagcagca ggatcgggtg accggtgatg aagccacgcg
     4441 ccagattgac ccgttgttgc tcgccgcccg aaaatgtcgc cggcggaatg ctgtgcagcc
     4501 gtcgcggaat gttcagtgcc agcagcatcg cagcggcctg ctcgcgcgcc gcatcggcag
     4561 agggttcgcg gccgagcaac gcctctgcca cgatgtccaa cgcgggaacc cgcggcacga
     4621 cgcgcaagaa ctgactgaca taagccatgg tgtgttggcg gacggcgagg atggtgcgcg
     4681 gatcggcact ggcgatatcc acggtcgagc ccagatgctg caccagaatc cgcccggtgt
     4741 cggcccggta attgccatag agcgagcgca gcaatgtgga cttcccggca ccggaggggc
     4801 cggatagcac cacgcactcg ccggcatcga cggacagatc gaccgagccc agtaccggca
     4861 gacgcaggcc accacggaga tgcaaggtga agctcttgga caatgatt
//
LOCUS       DATAVD010001245         1560 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1235127, whole genome shotgun sequence.
ACCESSION   DATAVD010001245 DATAVD010000000
VERSION     DATAVD010001245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1235127"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1429
                     /locus_tag="VHX39_23805"
     CDS             <1..1429
                     /locus_tag="VHX39_23805"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX3994208.1"
                     /translation="GPMHGIPFALKDIYCTAGIRTTCHSRTLAEYVPRFDATTVAKLN
                     ETGAVLLGKLSTHEFAHGGPSFDLPWPAARNPWNREYFTGGSSSGSGASVAAGLAPGS
                     LGSDTGGSIRNPAALCGLIGLKPTYGLISRSGVYTNSFSYDTAGPMTWTVEDCAILLG
                     AIAGHDPKDPASARHSVPDYRGALNGNVKGLRIGVLRHLYETDVDSPAVAKAALEQAI
                     DVFRSLGATIKDTRIRPAMDYYDVKIVGAESELYAVHEPVLRRRLSDFGEDFLGRSLG
                     ALLFSGADYVQASRERRAMIAEMDAIYKRYDLLLTLGPGPAPRLDAHETINFWRRASL
                     TTPFNVLGGPAISQCIGFTSDGMPLAMQIVGRPFDEATVLRAAHAYETATSWRERRPL
                     LDPDASFSTALPPITAPAKAEISQPERDRIASICRRAGLLLNERHFEQLCATSPYIEA
                     MTGRLNRTREFYEEPSSVFVMTPNG"
BASE COUNT          284 a          492 c          490 g          294 t
ORIGIN      
        1 agggccgatg cacgggatcc cgttcgcttt gaaggacatc tactgcaccg cgggaatccg
       61 gaccacatgc cactcccgaa cgctggcgga gtacgtgccg cgtttcgatg cgaccacggt
      121 ggccaagctg aatgagacag gcgcggtgct gctgggaaag ctgtcaacgc atgagttcgc
      181 acacggcggc ccgtcgttcg acctgccctg gcccgctgct cggaatccgt ggaaccggga
      241 atattttacc ggcggatcct ccagcggttc gggcgcgagc gtggcggcag ggctcgcgcc
      301 ggggtcgctg ggttcggata ccggcggctc gatccgcaat ccggcggcgc tatgcggact
      361 gatcggtctg aaacccactt atggcctgat cagccggagc ggtgtctaca cgaactcgtt
      421 cagctacgac accgccggtc caatgacctg gacggtggag gattgcgcga tcctgctggg
      481 tgccatcgcc ggccacgatc cgaaggaccc ggcgagcgct cgccacagcg tgcccgatta
      541 tcgaggcgca ctgaacggca acgtgaaggg cctgcgcatc ggcgtgttgc gccatctgta
      601 cgaaaccgac gtcgactctc cagccgtcgc caaagcggca ctcgagcagg cgatcgacgt
      661 attccgttcg ctcggtgcga cgatcaagga cacacgcatc cgcccagcga tggattatta
      721 tgatgtgaaa attgttggcg ccgagagcga gctttacgcc gtgcatgagc cggttctgcg
      781 ccgccgcctc agcgacttcg gtgaggattt tctcggccgt tcactgggcg ctctgttgtt
      841 ttccggcgct gattacgtac aggcctcccg cgaacgccgg gcgatgattg ccgaaatgga
      901 tgccatttac aaacgatacg atctgttgct gaccttgggc cctgggccgg cacctcggct
      961 ggatgcgcac gagacgatca atttttggcg tcgcgcctcg ttgacgacac cgttcaacgt
     1021 gctcggaggg ccagcgattt cgcagtgcat cggcttcacc tcggacggca tgccactggc
     1081 gatgcagatc gttggccggc cgttcgatga ggccaccgtg ctgcgcgccg cgcacgctta
     1141 cgagaccgca acgtcctggc gggagcgccg cccattgctg gaccctgatg cgtctttttc
     1201 gaccgcactg ccgccaataa cagcaccggc aaaggcggaa atcagccagc ctgagcggga
     1261 cagaattgca tcgatttgcc ggcgcgcagg actgttactg aatgagcgac acttcgagca
     1321 actctgcgcc acctcgccct acatcgaagc gatgaccggc cgcctgaacc gcacgcggga
     1381 attttatgaa gaacccagta gcgtcttcgt tatgacgcca aacggttgat gccacgcctc
     1441 acggaacttc ggctgccgct cgatcacccg gaggaggcgc ttccagccgc gatccgcgcc
     1501 cgtcttggcc tgagcgagga cgtgccgctt tcgtggtcgg tggcacgacg cggttacgat
//
LOCUS       DATAVD010001246         2600 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3280025, whole genome shotgun sequence.
ACCESSION   DATAVD010001246 DATAVD010000000
VERSION     DATAVD010001246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2600
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3280025"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            896..>2600
                     /locus_tag="VHX39_23810"
     CDS             896..>2600
                     /locus_tag="VHX39_23810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HEX3994209.1"
                     /translation="MATTVGDFFIERLHQWGVRRIYGYPGDGINGVFGALQRAEGKIE
                     FIQTRHEEMAAFMAAAHAKFTGELGVCIATSGPGAAHLVTGLYDARLDHMPVLAIAGQ
                     QARTAIGGHYQQEVDLPALFKDVAGAFVHTAMMPSQVRHMTDRAVRIAIAQRRVTALI
                     FPNDIQDMPYEEPARAHGTLHSGVGYRAPKVMPYEEDLRRAADVLNAGKKVAILAGAG
                     ALHATDEVIAVADRLGAGVAKALLGKAALPDELPWVTGSIGLLGTEPSWNMMNECDTL
                     LMVGSGFPYSEFLPKEGQARAVQIDIASEMLSLRYPMEVNLVGDAAETLRALLPMLRE
                     RSDHLWREKIEGWTGEWWKTLKERAMQPANPVNPQRVTWELSPRLPERAIITSDSGSC
                     ANWYARDLKIRRGMMCSLSGGLASMGAAVPYAIAAKFAHPDRPVIALVGDGAMQMNNM
                     AELITVAKYWRQWSSPRWIVGVFNNEDLNQVTWEQRVMEGDPKFNASQRIPDVPYHKF
                     AELITVSKYWREWSNPKWIVCVFNNQDLNQVTWEQRVMEGDPKFNATQQIPDVPYHRF
                     AE"
BASE COUNT          504 a          837 c          806 g          453 t
ORIGIN      
        1 atcccggacg accgcatcca accgaacccg atcctcagcc gtgacggaga tggatattcc
       61 cttgcgcatc ccgcagactc gcacggatat gcgccgacgc cgacccctag cggagtcttc
      121 tgttaggggt tatccactag ctccatcagc cgatgggccg cgaacccgat catctcgcgc
      181 agcagatcgg tgtccgagct cttctccaaa agcacctgaa ggctcaccat ctcgtcggtc
      241 atcgccgggt ccttggttcg cgttgagggg tgcgaccaaa accctaccga agacctgcga
      301 tgaccaccgc cgtggataag tagcccgccg ccgcctgact cgtggcggtc gctgcggcgg
      361 gctacttacc caccgctcct acaccacccg gcgggacacg accgtagtcg aagcgcaagg
      421 ccagatcgag cgtcatcacg actcaaccac ctctcccatt tctttgtgaa ccaacgtgca
      481 gtgcgtggtg ccaatcggca tcagatcggt gtgcgcacga cgccgctcac gctttcgtgc
      541 cacgttttga ggattagcgt gtcgccacga tagcggcggg tcgcttggtg cggcgtatcg
      601 cgcggggcga gccgccagca accatgccgc cagtcgccga ggagcgcggc aaagcacgcg
      661 tcgctgtcga aatgcggcca gcacacagcc aatcggtcgc gtcatcgccc gcgaccaagg
      721 ctgcactgcg tcggtctccg atcagggcgt agtccgcaat aggtttgctc accgtccccc
      781 gagtcttgtc catctggaac cgcgcccgaa gacgcaacgt ttgaacgaaa gagcaggccg
      841 aaggtttcgc ttggccctct ttccttttca acctttgcgt caagggcacg aacacatggc
      901 cacgaccgtc ggagacttct ttatcgaacg gcttcatcaa tggggtgtgc ggcggatcta
      961 tggctatccc ggcgacggca tcaacggcgt gttcggcgca ctgcagcggg ccgagggcaa
     1021 gatcgagttc atccagacgc gacatgagga gatggcggct tttatggctg ccgcgcacgc
     1081 gaaattcact ggcgaactcg gcgtctgcat cgccacctct gggccgggtg cagcgcatct
     1141 ggtgaccggc ctttacgacg cacgactgga ccacatgccg gtattggcaa tcgccggcca
     1201 gcaggcgcgc accgcgatcg gtggccacta ccagcaagag gtcgatctgc cggcgctgtt
     1261 caaggatgtc gccggtgcct tcgtccacac cgcgatgatg ccgtcgcagg tgcgacacat
     1321 gaccgaccgc gccgtccgca tcgcgatcgc gcagcggcgg gtcaccgcgc tgatcttccc
     1381 gaacgacatc caggacatgc cttacgaaga gccggcgcga gcgcacggca cattgcattc
     1441 cggggttggc taccgcgcac cgaaggtcat gccgtacgag gaggatctgc gtcgcgcggc
     1501 cgatgttctg aatgcgggaa aaaaggttgc gatcctggcg ggcgccggcg cgttgcacgc
     1561 caccgacgag gttatcgcgg tcgccgaccg cctgggcgcc ggggtcgcca aagcgctgct
     1621 cggcaaagca gcactgccgg acgaactgcc ctgggtgacc ggctcgatcg gcctcctcgg
     1681 cacagagccg agctggaaca tgatgaacga gtgcgacacg ttgctgatgg tcggctcggg
     1741 ctttccctat tccgagttcc tgccgaaaga aggccaggcg cgggccgtgc agatcgacat
     1801 cgcgtcggaa atgctgagcc tgcgctatcc gatggaggtc aacctcgtcg gtgacgcggc
     1861 cgagacattg cgggcgctgc tgccgatgct gcgcgagcgc tccgatcatt tgtggcgcga
     1921 gaaaatcgag ggctggaccg gcgaatggtg gaagaccctc aaagagcgcg cgatgcagcc
     1981 ggccaacccg gtcaaccctc agcgcgtcac ctgggagttg tcgccgcgcc tgccggaacg
     2041 cgcgatcatc accagcgaca gcggctcatg cgccaactgg tacgctcgcg acctgaagat
     2101 ccgtcgcggc atgatgtgct cgctgtcggg cggacttgcg tcgatgggcg cggcggtgcc
     2161 ctacgcgatc gccgcaaaat tcgcacaccc cgaccggccc gtgatcgctt tggtcggcga
     2221 cggcgcgatg cagatgaaca acatggccga actaatcacg gtcgccaaat actggcgaca
     2281 gtggtcgagc ccgcgctgga tcgtcggcgt cttcaacaac gaggatctga accaggtcac
     2341 ctgggagcag cgggtcatgg aaggcgaccc caaattcaac gcgtcgcagc gcattcccga
     2401 tgtgccgtac cacaaatttg ccgagctgat cacggtatcc aaatattggc gggagtggtc
     2461 gaatccgaaa tggatcgtgt gcgtgttcaa caaccaggac ctcaatcagg tcacctggga
     2521 acaacgggtg atggagggcg atccgaagtt caatgccacc cagcagattc ccgatgtgcc
     2581 ctatcaccgt ttcgccgagc
//
LOCUS       DATAVD010001247         2183 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3280139, whole genome shotgun sequence.
ACCESSION   DATAVD010001247 DATAVD010000000
VERSION     DATAVD010001247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3280139"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..772)
                     /locus_tag="VHX39_23815"
     CDS             complement(<1..772)
                     /locus_tag="VHX39_23815"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03617 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEX3994210.1"
                     /translation="MRVSMGLPVHDWSACAKAARQAEEDGVDVITSNELRHDPFTPLA
                     FAALATERVTLVPSVAIAFPRSPMIVANHAWDLQRHSKGRFVVGLGSQVKAHNERRFS
                     VPWIAPAARLGEYVEALRAIFRCRETGEKLNYQGKYYQFSLMTPEFSPGPQQLPLPPI
                     AMAAVGPLMLKTAARVADSVRLHSFATRKYVDEVVRPLLATELVANGKSFEHFEMTGG
                     GFIATGPDEKTVREAAEKVRYRVAFYGSTPAYRGVFDQH"
     gene            846..1610
                     /locus_tag="VHX39_23820"
     CDS             846..1610
                     /locus_tag="VHX39_23820"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3994211.1"
                     /translation="MASLTGKVIIVTGASRGIGAAASVALAHAGAQVILVARDGRLAE
                     DVAQGIVASGGLATAAAADVSDYGAVETMVSDTERRYGRIDALINNAGVIEPIAAIAS
                     SNPAEWARNVQINLVGAYHPIRALLPRMIKAGRGTIVNVSSGAAIRPLEGWSAYCSAK
                     AGLAMLTQAIRLETTATNIRVFGFQPGTTDTDMQVTIRASGINIVSKIPRENLTPVAH
                     PAAAIVYLCTSAADDLNGQEFALRDESFRSRLQLDS"
     gene            1613..>2183
                     /locus_tag="VHX39_23825"
     CDS             1613..>2183
                     /locus_tag="VHX39_23825"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3994212.1"
                     /translation="MPGPLDGVKVIEIGQALAGPLAGVILADLGADVIKVEKPDGGDD
                     ARLWGPPFIDGDSVSFHSNNRAKRSVTLDIKSAADVERLTALVEHADILIQNLRPGIV
                     EACGIGPAAMTAVNPRLIYCSIWAFGHQGPLQMAPGFDPLLQCYGAVVSLTGRPDDPP
                     TFCAPAINDTATGMWCAIGALAALKQREAT"
BASE COUNT          417 a          674 c          684 g          408 t
ORIGIN      
        1 catgctggtc gaagacaccg cggtaggccg gagtcgaacc atagaacgcc acccggtagc
       61 gcaccttctc tgccgcctcc cgcacggtct tttcatccgg accggtggcg ataaagccac
      121 cgccggtcat ttcaaaatgc tcgaacgatt tgccattggc gacgagctcg gtggcgagca
      181 gcgggcggac gacctcatcg acatatttgc gggtggcgaa actgtgcagc cgcacactgt
      241 cggccacgcg cgccgcagtc ttcagcatca acggccccac tgcagccatc gcaatcggcg
      301 gtagcggcag ttgttgcggg ccgggcgaaa attccggtgt catcaaggag aattggtagt
      361 atttaccttg ataattaagt ttctcgccgg tttcccggca gcggaagatg gcacgcagcg
      421 cttcaacata ctcgccaagc cgggcagcgg gcgcgatcca tggcacactg aaccggcgct
      481 cgttatgcgc cttgacctgc gaccccagcc caacaacgaa acgacctttt gaatggcgct
      541 gcaggtccca ggcgtggttg gcaacgatca tcggactgcg cggaaaggca atggcgaccg
      601 atggcaccag agtcacgcgc tcggttgcca gggccgcgaa cgccagcggg gtgaacggat
      661 cgtggcgcaa ttcgttgctg gtgatcacgt cgacaccatc ttcctcggcc tggcgggcgg
      721 ctttggcgca ggccgaccaa tcgtgcaccg gcaatcccat tgaaacgcgc attgtcggta
      781 tcctccccgt ttgccgcctg gctcgtggtc tcgtaaacct gggttggaga gaggagtcaa
      841 actgcatggc cagcctgacc ggcaaagtca ttatcgtcac cggagcaagc cgtggtatcg
      901 gtgctgccgc ctccgtcgca ttggcgcacg cgggcgcaca ggtcatcctg gtcgccagag
      961 atgggcgcct ggcagaggat gtcgcccaag gcattgtcgc atccggtggc ctggccaccg
     1021 cggcagccgc cgacgtgtcg gactatggcg ccgtcgagac catggtatcc gataccgaac
     1081 gccgctacgg ccggatcgat gcgttgatca acaacgcagg cgtgatcgag ccgattgccg
     1141 ccatcgccag cagcaacccg gccgagtggg cgcgcaatgt ccagatcaat ctggttggcg
     1201 cctaccatcc gatccgtgcg ctgctgccgc gtatgatcaa ggccggccgc ggcaccatcg
     1261 tcaacgtatc gtccggtgca gcgatacggc cgctggaggg atggagcgcc tattgctccg
     1321 ccaaggccgg tctggcgatg ctgacgcagg caatccggct ggagaccacc gcgaccaaca
     1381 ttcgggtttt tgggttccag ccaggtacga ccgataccga catgcaggtg acgatccgcg
     1441 cctccggcat caacatcgtc agcaaaatcc cgcgcgaaaa tctcactccg gtcgcgcatc
     1501 ccgccgctgc catcgtctat ctgtgcacat cggcggccga tgatctcaat ggccaggagt
     1561 tcgctctgcg cgatgagtca ttccgttctc gtttgcagtt ggacagttga atatgcccgg
     1621 accgttggat ggcgtgaaag ttattgaaat tggtcaggcg ctggcgggac cgttggccgg
     1681 cgtgatcctg gccgacctcg gcgccgatgt gatcaaggtg gaaaaacctg acggaggcga
     1741 tgacgcacgg ctctggggac ctcccttcat cgatggagac tcggtcagtt tccacagtaa
     1801 caatcgcgcg aaacgctcgg tcacactgga tatcaaaagt gccgcggatg tcgagcggct
     1861 gaccgcactg gttgaacatg cggacatcct gatccagaac ctgcggcccg gcatcgtcga
     1921 ggcatgcggg atcggaccgg cggcgatgac cgcggtcaat cctcggctga tctactgctc
     1981 gatctgggct tttggccatc aggggccgct gcagatggcg cccgggttcg atccgctttt
     2041 gcaatgctat ggcgcggttg tgtcgctgac cggcaggcct gacgacccgc cgaccttttg
     2101 tgcgccggcg atcaatgaca cggcaacggg catgtggtgc gcgatcgggg cactcgcagc
     2161 gttgaaacag cgtgaagcca ccg
//
LOCUS       DATAVD010001248         1771 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_490518, whole genome shotgun sequence.
ACCESSION   DATAVD010001248 DATAVD010000000
VERSION     DATAVD010001248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_490518"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..754)
                     /locus_tag="VHX39_23830"
     CDS             complement(<1..754)
                     /locus_tag="VHX39_23830"
                     /inference="COORDINATES: protein motif:HMM:NF019118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994213.1"
                     /translation="MQERQSRSGAEISTFRFGPLVLGIRIQRGGLTSLPEMIGHRAVS
                     DARATALLDIIDGPEPILEALLPPDYHGPDRFVMSSATAYCLWEPNYGGKLTAVDRTN
                     RRGVVWYRSATHLPSWEVARPFLQAFKGLAPTTGLTPVHAAAVALGERGILITGYSGA
                     GKTSTALACVEAGWRYVGDDVVLIAGAPLRAINMYRSARVREDMIPHLRRSMIGMLMF
                     STDGGERKAELDVGRLPSSAIGDAAIGAIVVPR"
     gene            complement(807..1226)
                     /locus_tag="VHX39_23835"
     CDS             complement(807..1226)
                     /locus_tag="VHX39_23835"
                     /inference="COORDINATES: protein motif:HMM:NF017239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqqD family protein"
                     /protein_id="HEX3994214.1"
                     /translation="MYFAVADPMHINARPFDDEVVVANFATGIYYSLLGSAAQVWTGL
                     TAGVAVPDIAATLAAQAKPADPEFIASTVAFIDQLRQEGLIRPAAAGPADVWQPAAPP
                     GGWLAPELERFTDMHDLLLLDPVHDTSEAGWPYVVTP"
     gene            complement(1486..>1771)
                     /locus_tag="VHX39_23840"
     CDS             complement(1486..>1771)
                     /locus_tag="VHX39_23840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994215.1"
                     /translation="TSRRTLSPVAEIMPDRCTPEYERVLAKMEVLLPYRRAWTVLSEF
                     LPLGRPQTVATIRRRTLCVVPDWRGKPWRPRRARRQSRRHPSRCRSMVVT"
BASE COUNT          332 a          554 c          551 g          334 t
ORIGIN      
        1 ggcgcggaac gacgatggcg ccgatggcgg cgtcaccgat ggcgctcgac ggcaagcgtc
       61 caacgtccag ctccgcctta cgctcgccac cgtcggtgga aaacatcagc atgccaatca
      121 tgctgcgccg caggtgtggg atcatatcct cccgcacccg cgccgagcgg tacatgttga
      181 tcgcacgcaa cggcgcaccg gcgatcaata ccacgtcatc gccgacgtag cgccagccgg
      241 cttcgacaca agcaagcgcg gtactggtct tgccggcgcc gctgtatcca gtgatgagaa
      301 tgccgcgctc gccgagcgcc acggcggccg cgtgtactgg cgttaggccg gtcgtcggtg
      361 ccagtccttt gaaggcttgc aggaacggcc gggcgacttc ccaggacggc agatgggtgg
      421 ccgaacgata ccacaccacg ccacgccggt tggtgcggtc gacggcggtg agtttgcctc
      481 cgtagttggg ttcccacagg caatacgcag tcgcgctgct catcacaaag cgatctggtc
      541 catgataatc cggtggcagc agagcctcga gaatcggttc gggaccatcg ataatgtcga
      601 gcagtgctgt tgcccgtgcg tcgctgactg cgcgatgtcc gatcatctcc ggcaaagagg
      661 tcaggccacc tcgctggatc cggataccga gtacgagcgg cccgaaccgg aacgtcgaga
      721 tttccgcacc ggaacgggac tgccgttctt gcatgcgctc gatcgctagt ctgatccgat
      781 gcgaggaaaa ttcaccccac gtgacttcag ggagtgacga catacggcca gccggcttcg
      841 ctcgtgtcat gcaccggatc aagcaatagt aagtcatgca tatcggtgaa tcgttccagt
      901 tccggggcga gccagccgcc cggcggtgcc gcaggttgcc agacatctgc cggaccagcc
      961 gcggccggcc gaatcagacc ctcttggcgt agctggtcga tgaatgcgac agtcgaggca
     1021 ataaactctg gatctgcggg cttggcttgg gccgcaaggg tggcggcgat gtccggcacc
     1081 gcgacgccgg ccgtcaaccc ggtccaaact tgggctgctg accccagtag actgtagtag
     1141 atgccggtag cgaagttcgc gacgactacc tcatcgtcga acgggcgcgc attgatatgc
     1201 atcggatcgg caacggcaaa atacattgta cgcatccctt cgggcctgat cgcagtgact
     1261 attggaggct aggtcaatcg atgtcggatg ccaagccagt gcatctgctc aactcgatca
     1321 aatgacaaac tctggctctg ttgcagcctt tctcggcgag acgcttgcct gccattcggt
     1381 cctcttcggt cttggcgggc cagcttttcg tggcctgagc gggatgctgg ctgacctgcg
     1441 cgaggagaac ctcgaaagtg cacccttggt attggcgtgc agcccttatg tgaccaccat
     1501 cgatcgacag cgtgatggat gtcgccggct ctgccggcgc gcacgccggg gccgccacgg
     1561 ctttcctctc caatctggca ccacgcaaag cgttcgccgc cggatcgttg ccacggtctg
     1621 aggtctcccg agcggcagaa attccgacaa tacggtccag gcgcgccgat agggcagcaa
     1681 cacctccatt ttcgccagga cccgctcgta ttccggtgtg catcgatcgg gcatgatttc
     1741 cgcgaccggg ctgagcgtgc ggcggctggt c
//
LOCUS       DATAVD010001249         1783 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_865909, whole genome shotgun sequence.
ACCESSION   DATAVD010001249 DATAVD010000000
VERSION     DATAVD010001249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_865909"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1414
                     /locus_tag="VHX39_23845"
     CDS             <1..1414
                     /locus_tag="VHX39_23845"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994216.1"
                     /translation="ALKSMPMTAMQFRIWALACAGKFFEGMVVFMTGVALPLISIQFH
                     LNAAEKGMVTAASLAGILVGATALGGLADTYGRKRMFIVEMIIFAVFLVGLTVAPNFI
                     TLVICLFGAGIALGCDYPTAHMVISESIATSMRGRLVLSAFAFQAIGAFFGTALGFGI
                     LYANPNLGAWRMMYAAAIVPAILVVVGRLFVTESPHWLVAKGRTVDGEKATTELLKRT
                     PQYPKNVSLGHLADQAKIKAAEGHGSYLSLFKKKNRRATILASVPWFLQDLGVYGIGI
                     FTPTILGAVIGKESKSHGLSDTIHNDILGAKGSAMMDVLFVLGVIVAILLVDRVGRIK
                     LQIWGFLGCAVGLVLAGASIRPDGSNVMWLLFLGFTLFYFMVNFGPNAMTYLLAGEVF
                     PTEVRGKGAGFAASFAKIGAVLTAFLFPILLKTIGTTALLWGLVVCFLAGAIVTYLFR
                     IETAGVNLEDVGKEEAATAK"
     gene            1487..>1783
                     /locus_tag="VHX39_23850"
     CDS             1487..>1783
                     /locus_tag="VHX39_23850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994217.1"
                     /translation="MSDYGDRLLSDDQIAAMSPAQRRDLIQRLERPLDEVFPPAIARR
                     MRRNRLTLTVVGAVGLIPWMIYLAFTLPENYVAHNWPATWIGFDCVLIAFMIATA"
BASE COUNT          289 a          549 c          581 g          364 t
ORIGIN      
        1 ggcgctgaag tcgatgccga tgaccgcgat gcagttccgg atctgggcgc tggcctgcgc
       61 gggcaagttc ttcgagggca tggtcgtgtt catgaccggc gttgccctgc cgctgatctc
      121 gatccaattc cacctgaacg cagccgagaa aggcatggtt accgcggcct ccctggcggg
      181 catcctggtc ggtgcgacgg ccctcggtgg tttggctgac acctacgggc gtaagcggat
      241 gttcatcgtg gagatgatca tctttgccgt gttcttagtg ggtctgacgg tcgcccccaa
      301 cttcatcacc ctggtcatct gtctgttcgg ggccggtatc gcgctgggct gcgactaccc
      361 gaccgcgcac atggtgatct cggagagcat tgcgacctcg atgcggggcc ggctggtgct
      421 gagcgccttt gcgttccagg ccatcggcgc gttcttcggc acggcgctgg gcttcggcat
      481 cctgtatgcg aatccgaacc tgggcgcgtg gcggatgatg tacgcggcgg caatcgtgcc
      541 ggcgatcctt gtcgtcgtcg ggcgcttgtt cgtcacggag agcccgcact ggctggtggc
      601 gaagggccgc accgtcgacg gggagaaggc caccaccgaa ctgctcaagc gaactccgca
      661 gtaccccaaa aacgtatcgc tgggacacct ggccgatcag gccaagatca aggccgccga
      721 aggtcacggg tcctacctgt cgctgttcaa gaagaaaaac cggcgcgcga cgatcctggc
      781 ctcggttccg tggttcctgc aggacctagg cgtctacggc atcggcattt tcacaccgac
      841 gattctgggt gccgtcatcg gcaaggagtc gaagtcgcac ggactgtccg acaccatcca
      901 taacgacatc ctgggcgcca agggctcggc catgatggac gtgctgttcg tcttgggcgt
      961 catcgtcgcc atcctcctgg tggacagagt cggacggatc aaattgcaga tctggggctt
     1021 cctcggctgc gcggtgggtc tggtcctggc cggggcgtcc atccggccgg acggcagcaa
     1081 cgtcatgtgg ttgctcttcc tcggcttcac gctgttctac ttcatggtca acttcgggcc
     1141 gaacgccatg acgtatctgc ttgccggcga ggtcttcccg accgaggtcc ggggtaaggg
     1201 cgccggcttc gccgcgtcct tcgccaagat cggcgcggtg ttgacagcgt tcctgttccc
     1261 catcctgctc aagaccatcg gcaccaccgc actgctctgg ggcctggtcg tgtgcttcct
     1321 ggctggagcg atcgtgacct acttgttccg gatcgagacc gcgggcgtga acctggagga
     1381 cgtcggcaag gaagaagcgg cgacggctaa gtaatagcgc ggtcccgcta cggcacctgg
     1441 gttgtcgtag cggggacgcg gccgccgagg cggatactca tcaggcatga gcgactatgg
     1501 cgatcgcttg ctgtcggatg accaaatcgc ggcgatgtca ccggcgcaac gcagggactt
     1561 gattcagcga ctggagcggc cgctcgacga agtgttcccg ccggctatcg caagacgcat
     1621 gcggcgcaac cggttaaccc tgacggtggt cggcgccgtc gggttgatcc cgtggatgat
     1681 ctacctcgcc ttcaccctgc ccgagaacta tgttgcccac aattggccgg cgacgtggat
     1741 cggcttcgac tgtgtgctca tcgcattcat gatcgctacc gcg
//
LOCUS       DATAVD010001250         4053 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1235760, whole genome shotgun sequence.
ACCESSION   DATAVD010001250 DATAVD010000000
VERSION     DATAVD010001250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4053
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1235760"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..844)
                     /locus_tag="VHX39_23855"
     CDS             complement(<1..844)
                     /locus_tag="VHX39_23855"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3994218.1"
                     /translation="MEFGIGIATSSDSWKLAERAEALGFSHAWFYDTQMITADCFVAM
                     GAAALKTSRIHLGTGVLVPSNRIAAVTANSFATLNAMAPGRIDFGVGTGFSARRAMGL
                     GSMKLADMEEYIRVVYGLLNGETLETPIEGKPRKIRFLNPDAGLINIKDPVKLHISAY
                     GPRSQAMVARLGAAWKTFVSDTDGALSAIEGMRNDWTAAGRSPSDLYTTAWACGCVLE
                     PGEPADSPRAMAQAGPRAAVLLHRAADVDMMGWKNTSDVPASVQKNIDGYLETARQYE
                     PADAR"
     gene            934..2004
                     /locus_tag="VHX39_23860"
     CDS             934..2004
                     /locus_tag="VHX39_23860"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3994219.1"
                     /translation="MKFGLCYIPDYHAEYSGSWTDWYEGMIAEVRLAEALGFDSAWFA
                     EHRVPGFAFGSPALFIAALARETSRIRLGSSVSLLPLNNPVRMAEDYAMADVLSHGRL
                     DFGVGRGLYKYDYDVANVPMQESRDRFNENLTIIRRLWTDDAVTFHGRWTTIDGHSLG
                     PRPVQRPSPPIFIAAVRTTETYRWAGENGFSILTAPFFFPDHREQQGLLDVWKDALRT
                     HGHDPETKQVMAVYHMYCAETDAEVSQYADAALARYQAFTKATDQSRQAYRDPVAYKD
                     WKGFFENRESITLEQMKATRAVIGRPEECIEKVAMLVERFGLTQIAFEVNYGALPHDS
                     VMQSMRLFAERVMPHFADGRNS"
     gene            complement(1937..2977)
                     /locus_tag="VHX39_23865"
     CDS             complement(1937..2977)
                     /locus_tag="VHX39_23865"
                     /inference="COORDINATES: protein motif:HMM:NF025587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein"
                     /protein_id="HEX3994220.1"
                     /translation="MSDVLAAPRASDATGRIPLLDIGPDRAGEPSARAELARAIERTC
                     RDTGFLVIANHGIEQRLIDNTFAAAASFFDLPTEPKLALKVGDLNIGYLPYGAQIVRT
                     SKVHVNTQPNLSESFYIVNDLNADDPRIVSGDPLYGLNKWPAAMPEFKAATLAYMHAM
                     RPLAAQMVSVIGTSLGLEDDYFNARFCEPTTTLRLIRYPSHANAEDNQFGFAPHIDTN
                     FLTLLARSALPGLEVRTAEGEWIRPPHVPNTFVVNTGEMLGRYSNDRYTATPHRVIND
                     NNTLRHAIPFFYGPGLDAIIEPVPTCVSADNPARYEPLLYADHRRKLNLTNFDHRRSA
                     ASPVPQTGASTA"
     gene            3101..>4053
                     /locus_tag="VHX39_23870"
     CDS             3101..>4053
                     /locus_tag="VHX39_23870"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3994221.1"
                     /translation="MDNPTHIVAGGGSAGCALAARLSENPANRVLVIEAGPDHGTTNI
                     PDDIRDTYAHRAMTNPAYFWPALQASRGSHAHIPAAGRKPYFFYQGRLMGGGSSINGQ
                     VALRGAPADFDHWASLGAKGWDWGSVLPYFRRLETDLDYTDQYHGATGPITVRRIPRE
                     RWDEFTNAVARSWESQGHGFVPDMNGEFVEGYAPLPTSNDGTARRSTANGHLNDAVRA
                     RPNLQLMPETQVRRVLFMDNRAIGVQVFRNGQIESLFGDNVIVSSGALHSPKLLMLSG
                     IGPAAHLQQLGISVIADRPGVGANLQDHPLISVSAYLPRIAR"
BASE COUNT          759 a         1176 c         1304 g          814 t
ORIGIN      
        1 agcgcgcatc ggctggttca tattgccgcg cggtttcaag gtagccgtcg atgttctttt
       61 gcaccgatgc cgggacatct gacgtgttct tccaccccat catgtccaca tccgccgccc
      121 gatgcagcaa aaccgctgcc cgcggtcccg cctgcgccat cgcccgaggg ctgtccgccg
      181 gctcgcccgg ttccagcacg cagccgcaag cccaggcggt ggtgtagagg tcggacgggg
      241 agcgaccggc agcggtccag tcgttccgca tgccctcgat tgccgacagc gcgccgtcgg
      301 tatcgctgac gaacgttttc caggcggcgc cgagccgggc caccatggcc tgcgacctcg
      361 gcccataggc agagatgtgc agcttgaccg ggtccttgat gttgatcagc ccggcgtcgg
      421 ggttcagaaa ccggattttc ctcggtttgc cctcgatcgg cgtttccagc gtctcgccgt
      481 tcaggaggcc gtagacgaca cggatatact cctccatgtc ggcgagcttc atgctgccaa
      541 gccccatggc ccgccgcgcc gagaacccgg tgccgacacc gaagtcgatc cgccccggcg
      601 ccatggcgtt gagcgtcgcg aacgaattgg cggtaacggc ggcgatacgg ttggagggca
      661 caagcacgcc cgtccccaga tggatccggc tggtcttcag cgcggcggct cccatggcga
      721 cgaagcaatc cgcggtgatc atctgcgtgt cgtagaacca ggcgtgggaa aacccgagcg
      781 cctcggcacg ttccgcaagt ttccaggaat cgctggacgt agcgatgccg atgccgaatt
      841 ccatggacgt cctccgtaga gccgcggtgt ttagcgcatt ttggcgcgtc gggaaatgtg
      901 gtacatcggt gacaaattac caacgaggca acgatgaaat tcgggctttg ttacattccg
      961 gattaccacg cggaatattc cggctcctgg accgattggt acgaagggat gatcgctgag
     1021 gtccgcctgg cggaagctct tgggtttgac agcgcgtggt ttgccgaaca tcgcgttcct
     1081 ggtttcgcct tcggctctcc ggctttgttc attgcagcac ttgcccggga aacatcgcgc
     1141 attcgattgg gctcctcggt cagcctgttg ccgttgaaca atccggtgcg tatggctgag
     1201 gattacgcga tggcggacgt gttgtcgcac ggccgtttgg atttcggcgt cggccgcgga
     1261 ttgtataaat acgactatga tgtcgcgaat gtgccgatgc aggaaagccg agaccggttc
     1321 aacgaaaatc tgacgatcat ccgacggctt tggaccgatg acgcggtcac gtttcacggc
     1381 aggtggacaa cgattgacgg gcactcactg ggccctcggc cggtgcagcg tccatcgccg
     1441 ccgattttca tagctgccgt gcgtacgacg gagacctatc gttgggccgg tgagaatggc
     1501 ttcagtatcc tgaccgcgcc attcttcttt cccgatcacc gtgagcagca aggcttgctc
     1561 gacgtttgga aagacgcgtt gcgcacgcac ggtcacgatc cggaaacaaa gcaggtgatg
     1621 gccgtctatc acatgtattg cgcggaaacc gatgccgagg tttcgcagta cgccgatgcc
     1681 gcgctggcgc ggtaccaggc gtttaccaaa gccacggatc agtcacgcca ggcgtaccgc
     1741 gatccggtgg cttacaagga ctggaaaggg tttttcgaaa atcgcgagag catcactctc
     1801 gagcaaatga aagccacgcg cgcggtgatc ggccgcccgg aggaatgcat tgagaaagtc
     1861 gcgatgctgg tagaacggtt cggcctcacg cagatcgcgt ttgaagtcaa ttacggagcg
     1921 ttgccgcacg atagtgtcat gcagtcgatg cgcctgtttg cggaacgggt gatgccgcac
     1981 ttcgccgatg gtcgaaattc gtgagattca gcttgcgccg gtgatcggca taaagcaggg
     2041 gttcgtagcg tgccggattg tccgcactga cacaggtcgg caccggttcg atgatcgcat
     2101 ccagtcctgg gccataaaag aacggaatgg cgtgccgcag cgtgttattg tcgttgatca
     2161 cccgatgcgg cgtggccgta tagcggtcgt ttgaatagcg gcccagcatt tcgccggtgt
     2221 tgacgacgaa ggtgttggga acgtggggtg gacggatcca ttcgccctcc gcggtccgca
     2281 cctcaaggcc gggcagagcc gagcgcgcca gcagggtcaa aaaattggtg tcgatgtgcg
     2341 gtgcgaagcc gaactgattg tcctcggcat tggcgtggct gggatagcgg atcagtcgca
     2401 acgttgtggt gggttcgcag aagcgcgcgt tgaagtaatc gtcctccagg ccaagcgagg
     2461 tgccgatcac cgacaccatt tgcgccgcca gaggccgcat cgcatgcata tacgccagcg
     2521 tggccgcctt gaattccggc atcgccgcgg gccatttgtt caggccgtac agcggatcgc
     2581 cggaaacgat gcgggggtcg tcggcgttca ggtcgttgac gatatagaag ctttcgctga
     2641 ggttcggctg cgtattgaca tgcactttcg acgtgcgaac gatctgcgcg ccatatggca
     2701 gatagccgat gttcagatcg ccgactttca aggccagctt gggttccgtc ggcaggtcga
     2761 aaaagctcgc cgcggcagcg aaggtattgt cgatcaggcg ttgctcgatg ccgtggttgg
     2821 cgatcacgag aaagccggtg tcgcgacagg ttcgctcgat cgcgcgagcc agctcagcgc
     2881 gagcagaagg ctcgccggcc cggtccggac cgatatccag cagcggaatc cggccggtcg
     2941 catctgaagc gcgcggtgct gcgagaacgt cactcatcgg cgtataacct ttcctcggcg
     3001 ttcccggtgg cgagcgatgg ccgggctgcc gttgccgggt tgatcatcgc atcctcgcat
     3061 gcgaaggacc agagcgaagc ttaagggcgg aaaccacgtc atggacaacc ccacgcacat
     3121 cgttgcgggc ggcggctcgg ccggatgcgc gctggcggca cggttgagtg agaacccggc
     3181 caatcgcgtg ctggtgatcg aagccggtcc ggatcacggc acgacaaata tccccgacga
     3241 cattcgcgat acctatgcgc atcgggcaat gaccaatccg gcgtatttct ggcccgcgct
     3301 gcaggcgtcg cgcggtagcc atgcgcatat ccccgcggca gggcgaaagc cgtatttctt
     3361 ttatcagggc cggctgatgg gcggcggctc gtccatcaac ggtcaggtcg cgttgcgcgg
     3421 cgcacccgcc gacttcgacc attgggcttc gcttggtgcc aaaggctggg attggggatc
     3481 ggtgttgccg tatttccggc ggcttgagac cgacctcgat tacaccgatc aataccacgg
     3541 cgccaccgga ccgatcaccg tgcgacgcat tccacgtgag cgatgggatg agttcaccaa
     3601 cgctgtggct cggagttggg aaagccaggg gcacggtttc gtccctgaca tgaatggcga
     3661 atttgttgaa ggttatgcgc cgttgccgac ctctaacgat ggaacggcgc ggcgttcgac
     3721 ggcaaacggg catcttaatg acgcggtcag ggcgaggccc aacctgcaac tgatgccgga
     3781 aacccaggtg cggcgcgtac tgttcatgga taaccgggcg atcggagtgc aggtttttcg
     3841 caacggccag atcgagtcat tgttcggcga taatgtgatc gtcagctcgg gcgcgttgca
     3901 cagtccgaag ttgctgatgc tgtcgggtat cggacccgct gcacatctgc aacaactcgg
     3961 catttcggtg attgccgacc ggcccggtgt gggagcaaac ctgcaagatc atccgctgat
     4021 ttcggtgtcg gcgtatctgc cgcggatcgc ccg
//
LOCUS       DATAVD010001251         2537 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1048388, whole genome shotgun sequence.
ACCESSION   DATAVD010001251 DATAVD010000000
VERSION     DATAVD010001251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2537
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1048388"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(279..797)
                     /locus_tag="VHX39_23875"
     CDS             complement(279..797)
                     /locus_tag="VHX39_23875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994222.1"
                     /translation="MRSNRLPGAHFTNTTPSASILVGCTYMMNHWAAGSAVQDLYFIA
                     NLNAWANRTDKYNNTHTLLDDLKAMFNYRGQIWVYDKDIKGASVDVKIGAVAGIAYRV
                     TPNPDPMLAHPKNDVKRVSIPTRTRSGGRNVPLAGNSTALVQDLDAMYIHQVQTSQAG
                     WNLFVQGDMIPV"
     gene            complement(843..2444)
                     /locus_tag="VHX39_23880"
     CDS             complement(843..2444)
                     /locus_tag="VHX39_23880"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3994223.1"
                     /translation="MQTYDYIVVGAGSAGAVVANRLSADARNRVLLLEAGPESHPWSR
                     IPVGIAKLIKNPAANWLYASEPEANTNGRSLPVPRGRLLGGSSSINGMAFVRGQAQDF
                     DHWAQMGNQGWSYADVLPFFRRMETYDEGDDEFRGRNGPLRVTNPPPRDPLFATLIKA
                     AGEVGIRHNPDYNGATQDGIAMSQATIASGRRMSTARCYLDPIRSRTNLHIETGALAR
                     SLVLDGKRCTGVRYSVGNEQREAHASREVVVSGGTINSPQLLELSGIGQPDRLGDLGI
                     EVRHALPGVGENLRDHYAPRTRWTIGAKWITYNDRGRGLPLVWQALRYAFSGQGLLGM
                     VGAPMRAFVRSREGLEAPDLLLGWVPMLTEQRPKGPVLSRQCGMTCYAHPMRPESKGH
                     IHITSADPLKPPAINFNFLSSPIDAELTVRAVRIACSVMHAPAMAPLQVTELAPGADR
                     RTDDEIIDWVKGAAETTYHPVGTCKMGADALAVVDHRLRVHGIDGLRVADASIMPVLT
                     SGNTNAPSIMIGEKAADMVLQDAAG"
BASE COUNT          499 a          783 c          765 g          490 t
ORIGIN      
        1 aatatgaaag tcgttgcgag cgtcacaacg cttatacgaa atgtggtggg ttgaatgcgt
       61 gggcaagaaa gacgtgcgga aggtttatag caacggtggt agaaactaaa cccggtcata
      121 aatgcggcta ctcaatagtc cttgtcgcat gtaccgtcgg tcagtagcga aacggcatga
      181 ctgacgatca aagcggcgag acgaccgtat gcccaggagt agcgcaactg tccggccgtg
      241 gagatgcgca gcacacgacg ccagccgaaa tcttcgattc aaacggggat catgtcgcct
      301 tgaacgaaga gattccagcc ggcttgactg gtttgcacct ggtggatgta catggcatcc
      361 aaatcctgca ccagcgcagt ggaattaccg gccagcggga cgttgcgccc gcctgaccgc
      421 gtccgcgtcg ggatcgaaac gcgcttcacg tcgttcttcg gatgcgccag catcggatca
      481 ggattcggcg tcactcgata ggcaatcccg gccacagccc cgatcttcac atcgacagag
      541 gcgcctttaa tgtccttgtc atagacccag atttgccccc ggtagttgaa catcgccttc
      601 aggtcatcca acagcgtatg cgtgttgttg tatttgtctg tgcggtttgc ccaggcattc
      661 aggttcgcga tgaaatacaa atcctgaacc gccgagcccg cggcccagtg gttcatcatg
      721 taagtacaac cgaccaggat agacgcactg ggcgtcgtgt tggtaaaatg cgcgcctggc
      781 aggcgattgc tgcgcacgcc gacgttgcct tggcgcggtc ctgcgacatt caacctgagc
      841 cgttacccgg ccgcgtcctg caacaccata tccgccgcct tttccccaat catgatcgac
      901 ggcgcgttgg tgttgcccga cgtcagcacc ggcatgatcg aggcgtccgc cacgcgcagc
      961 ccatcgatgc catgcacccg cagccggtga tcgacaactg ccaacgcatc agcgcccatc
     1021 ttgcaggtgc caaccggatg atacgtggtt tccgccgccc ctttcaccca gtcgataatc
     1081 tcgtcgtctg tcctgcggtc ggcaccaggt gccaattcgg tcacctgcaa tggcgccatg
     1141 gccggcgcgt gcatcacgga gcaggcgatg cgcacggcgc gcacggtcaa ctcggcatcg
     1201 atcggcgacg acaggaaatt gaagttgatc gcggggggct tcagcggatc ggctgacgtg
     1261 atgtggatat gccccttgct ctccggccgc atcggatgag cgtagcaggt catgccgcat
     1321 tggcgcgaca gtactgggcc ctttggccgt tgctcggtca gcatcggcac ccagcccaga
     1381 agcaaatcag gtgcctcgag gccctcgcgc gagcggacaa aagcccgcat tggcgcgccc
     1441 accatgccga gcaggccttg tcccgagaat gcatagcgca acgcctgcca aaccagcggc
     1501 agaccgcggc cccgatcatt gtaagtgatc catttcgcac cgatcgtcca tcgcgttctg
     1561 ggtgcgtaat gatcgcgcag gttctcgccg acaccgggca gagcatgccg gacctcgatg
     1621 ccgagatcgc ccagtcggtc gggctggccg atgccggaga gttccaacag ttgcggcgag
     1681 ttgatcgtgc cgccgctgac aacgacttcc cgggatgcgt gcgcctcgcg ttgctcatta
     1741 ccgacggaat accgcacgcc ggtgcaacgt ttgccatcga gcacgagtga cctggccaac
     1801 gcacccgttt cgatatgcaa attcgtccgg ctacggatcg gatcgaggta acaacgtgcg
     1861 gtgctcatgc ggcggccgga ggcgatcgtg gcctggctca tcgcaatgcc atcctgagtg
     1921 gcgccgttgt aatcggggtt gtgccgaatg ccgacctcgc ctgccgcctt gatcagcgtg
     1981 gcgaacagcg gatcgcgcgg tggcgggttg gtgacgcgca gcgggccgtt acggccgcga
     2041 aattcgtcgt caccctcgtc ataggtttcc atgcgccgga agaacggcag cacgtcggca
     2101 taactccatc cctggttgcc catctgagcc cagtgatcga agtcctgagc ctggccgcgg
     2161 acaaaagcca tgccgttgat cgaactggag ccgccgagca agcggccacg cggcaccggc
     2221 agcgagcggc cgttcgtgtt ggcctcaggc tcggacgcat agagccagtt ggccgcaggg
     2281 ttcttgatca gctttgcgat gccgaccgga atccgcgacc agggatggct ttccgggccg
     2341 gcctccaaca gcaggacgcg gttgcgcgca tcggccgaaa gccggttggc gacgaccgct
     2401 ccggccgaac cggcgccgac aacaatgtag tcgtaggttt gcatgtttcc cgaaccccgt
     2461 tatttatcca gccagatccc cgccagatcc tgattgacgt aatggctcgg gctgattttg
     2521 aagcctttga cgtagct
//
LOCUS       DATAVD010001252         4391 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_678476, whole genome shotgun sequence.
ACCESSION   DATAVD010001252 DATAVD010000000
VERSION     DATAVD010001252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4391
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_678476"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            17..1234
                     /locus_tag="VHX39_23885"
     CDS             17..1234
                     /locus_tag="VHX39_23885"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEX3994224.1"
                     /translation="MPRIVMKFGGTSVANLDRIREVALRVKREHQAGNQVAVVVSAMA
                     GTTNQLVGWCQELAPLHDAREYDAVVATGEQVTAGLLAIALQEIGVEARSWQGWQIPI
                     HTDTAHAKARIVSIDASNLIERMGRGQVAVVAGFQGLAPDNRVATLGRGGSDTSAVAL
                     AAALKAERCDIYTDVDGIYTTDPRIVPQARKLAKISYEEMLELASVGAKVLQIRSVEL
                     AMNERVRVQVLSSFEDKPGTLVVDEDEIVEKELVSGIAYARDEAKITLRRVADRPGIA
                     ATIFGKLSEENINVDMIVQNLAADGTTDMTFTIGKTDLPRSHAALMAIQDQVGWSEVL
                     EDPNVAKISVVGVGMRSHAGVANTMFRALADKAINIQVISTSEIKVSVLIAAEYTELA
                     VRALHTAYGLDAA"
     gene            1224..2402
                     /locus_tag="VHX39_23890"
     CDS             1224..2402
                     /locus_tag="VHX39_23890"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEX3994225.1"
                     /translation="MPPDRPEHPNLVAGESSIDGGFSGGSAHVGGAGASASAEVVNAP
                     IWVDAVVKGQSERAALARLWARGTEFLGCPVAILGGAMSWVSERNLVSAISNAGGFGV
                     IACGSMTPELLANEIAATQAMTSQPFGVNLITMHPQLDDLIQVCLAAKVSHIVLAGGI
                     PPANAVKAVKDGGAKLICFAPALVLARRLVRSGADAIVIEGSEAGGHIGPVSLTVLAQ
                     EILPYVREVPIFVAGGLGRGEAILAYLEMGASGAQLGTRFAAATESIAHANFKKAFIR
                     AHARDALPSVQLDERFPVIPVRGLVNEGTRTFLRHQAETRDKFHAGDLDKEAAQLAIE
                     HFWAGALRRAVIDGDIEMGSVMAGQSVGMVTAEQSIADIFEELVGQATAALAARRQGE
                     "
     gene            2409..>4391
                     /locus_tag="VHX39_23895"
     CDS             2409..>4391
                     /locus_tag="VHX39_23895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HEX3994226.1"
                     /translation="MDAAPSDLSPPPSGQTRAAAERQATGGSAARPPVVSGEATPVTA
                     GDATPVAANVAGSVPIGVATSSAPGRRLLSKLRDLHAHGAAPVSELVRLVASEVGSEV
                     CSVYVRRPGDLLELAATEGLNLKAVGMTRLRVGEGIVGLCAAQGAVMNLPDAQNHPAF
                     AYRPETGEEPFASMLAVPVRRSGRVLGVLTVQNRMPRHFTGEEVDELETVSMLLAEML
                     PAASATEAVGEGLPSTVPRVFAGTTLMTGIAIGPVVLHGTRLTSIKLLAEDPEHELKR
                     LRDATDRVQRGIDDLLAGVPSDASTSRDVLEAYRLIAADQGWMRRVGEVIRSGLTAEA
                     AVARVATELHDRMRRISDSYLRERLADLEDLANRLLTTLTGHQPRETVPPGGILLARR
                     LGPAELLEWHANGIAGIAIEESSPSGHAAILARALGIPAVGGTRGMLDTAEPGHEAVI
                     DGDGAQLVLRPEAEVRHVYVRALEAHSLRYAGFAALRDRPAQSADGVRVSLMLNVGLD
                     LELAQLERTGAEGIGLFRTEIAMLARGAVADVAEQAAIYARVLNAAGDRPVLFRTLDL
                     GADKLLPGTVTEEENPAMGWRSLRIGLDRPALMRRQLRALLLAANGRKLSVMFPMVAT
                     VAEFRQAKALLVGEAQRVRPAPEQLSIGTMLEVPALM"
BASE COUNT          745 a         1391 c         1490 g          765 t
ORIGIN      
        1 ccagacacag gaccatatgc cgcgtatcgt gatgaaattc ggcggtacct ccgtcgccaa
       61 cctggatcgc atccgcgagg tcgccctgcg ggtgaagcgc gagcaccagg ccggcaatca
      121 ggtcgccgtt gtcgtctctg ccatggccgg caccaccaac caactggtcg gctggtgcca
      181 ggagcttgcg cccttgcatg atgccaggga atatgacgcc gttgtcgcga ccggcgaaca
      241 ggtgacggcc ggtctgctcg ccatcgcttt acaggagatc ggcgtcgagg cccgctcctg
      301 gcaaggctgg caaatcccga tccataccga caccgcgcat gccaaggcgc gcattgtctc
      361 gatcgacgcc tccaacctga tcgagcgcat gggacgcggc caggttgctg tcgtcgccgg
      421 ctttcagggt ctcgccccgg acaatcgcgt cgccacattg ggccgcggcg gatcggacac
      481 ctcggcggtt gcgctggctg ccgcgttgaa ggccgaacgt tgcgatattt ataccgatgt
      541 cgatggtatt tatacaaccg atccgcgtat agttccgcag gcgcgcaagc tcgcaaagat
      601 ttcttacgaa gaaatgctgg aactcgcctc ggtcggcgcc aaagtgttgc aaatccgtag
      661 cgttgaactg gcgatgaacg aacgcgtccg ggttcaggtc ctcagcagct ttgaggataa
      721 acccggcact ctggtggttg atgaggatga gatcgtggaa aaagaactgg tgtccgggat
      781 cgcctacgcc cgcgatgagg ccaagatcac gctgcgccgc gtggccgacc ggcccggcat
      841 cgccgcgacg attttcggca agctgtccga agaaaacatc aacgtcgaca tgatcgtgca
      901 aaaccttgcc gccgatggca cgaccgacat gaccttcacc atcggcaaga ccgatctgcc
      961 gcgcagccac gccgccctga tggcaatcca ggaccaggtc ggctggtctg aggtgctcga
     1021 agatccgaac gtcgccaaga tcagtgtcgt cggcgtcggc atgcgcagcc acgccggtgt
     1081 cgccaacacg atgttccggg cgctggccga caaggcgatc aacatccagg tcatttccac
     1141 cagcgaaatc aaggtcagcg tgttgatcgc cgccgaatat accgagcttg cggtccgcgc
     1201 cctgcatacc gcgtatggcc tcgatgccgc ctgatcgccc cgagcacccc aatctggtcg
     1261 ccggcgaaag cagcatcgac ggcggcttct ccggtggcag cgctcacgtt ggcggcgcgg
     1321 gtgcgagtgc cagtgctgaa gtggtcaatg cgccgatatg ggtggatgcc gtggtaaagg
     1381 gtcaaagcga gcgggccgca ctcgcgcggc tgtgggcacg cggcacggag tttctcggtt
     1441 gcccggtcgc catcctcggc ggcgccatga gttgggtaag cgagcggaac ctcgtgtccg
     1501 caatctccaa cgccggcggg tttggcgtga tcgcctgcgg ctcgatgacg cccgaattgc
     1561 tggcgaatga gatcgccgcg acgcaggcga tgaccagtca gccgttcggg gtcaatctga
     1621 tcaccatgca tccgcagttg gatgacctga tccaggtctg tctggctgcg aaagtcagtc
     1681 atatcgtgct cgccggtggc attccgccgg ccaacgcggt gaaggcggtc aaggacggcg
     1741 gtgcaaagtt gatctgtttt gcccccgcgc tggtgctggc ccgacggctg gtccgttcgg
     1801 gggccgacgc catcgtgatc gagggctcgg aagccggtgg tcatatcggg cccgtgtcac
     1861 tgaccgttct ggcgcaggaa atcctgccat acgtgcgcga agtccccatc ttcgtcgccg
     1921 gcggcctggg tcgcggcgaa gcgatcctgg cctatctgga aatgggggcc tcaggggctc
     1981 aactgggcac acggttcgcc gcggcgacag agtcgattgc ccatgcgaac ttcaagaaag
     2041 ccttcatccg cgcacacgct cgcgacgcct tgccgtcggt gcaactggat gagcggtttc
     2101 cggtgattcc ggtgcgcggg ctggtaaacg agggcaccag gacgttcctg cgccaccagg
     2161 ccgaaacgcg tgacaaattc cacgctggcg acctcgacaa agaagcggcc cagttggcga
     2221 tcgagcattt ctgggctggg gcgctgcgtc gtgcggtgat cgatggcgat atcgagatgg
     2281 gctcggtgat ggctggccag tccgtcggca tggtcacggc cgaacaatcg atcgccgata
     2341 ttttcgagga gttggtcggc caggccacgg ccgctctcgc tgcccgacgc cagggggaat
     2401 gaccggcgat ggacgccgcg ccctccgacc tgtcgccgcc cccatccggg caaaccaggg
     2461 cagcagccga acgccaggcc accggtgggt cagccgcgcg gccccctgtc gtttcgggtg
     2521 aagcgacccc ggtaacagcg ggcgatgcga ctcctgtcgc tgcgaacgta gcgggcagcg
     2581 tcccaatcgg cgtcgccacc tccagcgcgc ccggccggcg cctgctttcc aaattgcgcg
     2641 atctgcatgc gcatggtgcc gcgccagtct ctgaattggt gcgcctcgtc gcgtccgagg
     2701 tagggagcga ggtgtgctcg gtctacgtcc gccggcccgg cgacctgttg gaactggcgg
     2761 cgaccgaggg gttgaacctg aaggcggtcg gcatgacccg cttgcgcgtc ggcgagggca
     2821 tcgtcggcct gtgcgcagcc cagggtgcgg tgatgaattt accggatgcg caaaatcatc
     2881 cggcattcgc ctatcggccg gagaccgggg aagagccgtt tgcctccatg ctcgcggtcc
     2941 cggtacgccg ctccggacgg gtgcttggcg tattgacggt gcagaaccgg atgccacggc
     3001 atttcaccgg cgaggaagtg gacgagctgg aaaccgtgtc catgctgctg gccgaaatgc
     3061 tgccggccgc cagcgcgacc gaggctgtcg gcgagggcct gcctagtacc gtcccgcggg
     3121 tattcgccgg cacgaccctg atgaccggca tcgcgattgg tcctgtcgta ctgcatggca
     3181 cgcggctgac cagcatcaag ctgctggctg aggaccccga gcacgaactg aagcggcttc
     3241 gcgacgcgac cgaccgcgtg caacgcggga tcgacgattt gctggcgggc gtcccgtccg
     3301 atgcgtccac ctcgcgtgac gtgctggagg cctatcgact gattgccgcc gatcaaggct
     3361 ggatgcgccg cgtcggcgaa gtcattcgca gcggcctgac ggccgaggcc gcggttgccc
     3421 gagtcgccac cgagctgcat gatcggatgc ggcggatcag cgactcctat ttgcgggaac
     3481 gactggccga tctggaagat ctcgccaatc gtttgttgac cacactgacc gggcaccaac
     3541 cgcgcgaaac cgtgccgcct ggcggcatcc tgctggcccg ccggctgggg ccggccgagt
     3601 tgctggaatg gcacgccaac ggcatcgccg gcattgcgat cgaggaatcc agtccatcgg
     3661 ggcacgccgc cattctggcc cgcgcactgg gcatccctgc cgtcggtggc acccgcggca
     3721 tgctcgacac cgccgagcct gggcatgagg cagtgatcga cggcgacggc gcccaattgg
     3781 tgctgcggcc cgaggcggag gttcgccacg tctatgtccg cgcgctggag gcgcattcgc
     3841 tgcgttatgc cggctttgcc gcactacgcg accggccagc ccaatcggcg gacggcgtgc
     3901 gggtgagcct gatgctgaac gtggggctcg atctggaact ggcgcaactg gaacgcacgg
     3961 gcgccgaggg gatcggcctg ttccgcaccg aaatcgccat gttggcgcgc ggcgcggtgg
     4021 ccgatgtggc cgagcaggcg gcgatctacg ctcgcgtgct gaatgccgcc ggcgatcggc
     4081 ccgtgctgtt ccgcaccttg gatctgggtg ccgacaaact gctgccgggc acggtgaccg
     4141 aggaggaaaa tcccgcgatg ggctggcgct cgctgcgcat cgggctggac cggccggcgt
     4201 tgatgcggcg gcagttacgg gcgctgctgc tggcggcaaa cgggcgcaag ctgtcggtga
     4261 tgttcccgat ggtggcgacg gttgccgaat tccgtcaggc caaggctctg ctcgtgggcg
     4321 aggcgcaacg tgtgcgtccc gcaccggagc agctgtcgat cggcaccatg ctggaagtgc
     4381 cggcgctgat g
//
LOCUS       DATAVD010001253         3192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_123042, whole genome shotgun sequence.
ACCESSION   DATAVD010001253 DATAVD010000000
VERSION     DATAVD010001253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3192
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123042"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            24..782
                     /locus_tag="VHX39_23900"
     CDS             24..782
                     /locus_tag="VHX39_23900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3994227.1"
                     /translation="MANLTGKIAWVTGAGSGIGEAAALALAEDGATVILTGRTQDKLE
                     NTARRIHNAGQAHVQPADLTDKAQVRQVGAYIKATFDRLDILVNNAGVNILDRHWDKL
                     TPESIDIMVQGNLTAALYCVAVALPFMRAQQDGLIIHTASMAGRFIGGVAGPIYVAAK
                     HGIVAMSHGLNMEECVNGIRSTVFLPGEVATPILDQRPNPVGPEVRARMVQPEDCGDL
                     IRYIANLPKHVVMNEVHLAPTHNRSYVANLQRRL"
     gene            complement(792..2306)
                     /locus_tag="VHX39_23905"
     CDS             complement(792..2306)
                     /locus_tag="VHX39_23905"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3994228.1"
                     /translation="MTQAIGVEAVGIGKRFGGFQALSDVSLKVTPGSVHGLLGENGAG
                     KSTLVKCLLGYYRADDGGFIVDGREASIERPADADALGLGMVYQHFTLVPSMTVAENL
                     VMSRQNVPSVINWRAEIAGLTRFMERMPFKVPLEVEVGSLAAGERQKTEIIKQLYLER
                     KFLVLDEPTSVLTPQEATEMLGLVRGLAHSGALTIVIITHKLKEVAAFVDEVTVLRRG
                     RMAGTGKVSDLGPMDLTAMMIGEPHAPKNPERKGAPSDEARLAVSGLHTAADGGRKGL
                     SIESMTVHAHEIVGIAGVSGNGQKDLVEVLGGQRPVESGSILVDGAAYDASRVQSQAR
                     DVRVLPEEPLRNGCVPPMTVVDNLNLRRFDVGDGGARRFWLDRAGMATRAREMIAAYG
                     IRTPSPQAPIGVLSGGNVQRCVLARELDGDVRLLIVANPCFGLDVKAVAETRARIMAA
                     RNAGTAVLLISEDLDEILELADRIVVMHDGKVAHEMAADGADPQEIGRHMLGQH"
     gene            complement(2303..2980)
                     /locus_tag="VHX39_23910"
     CDS             complement(2303..2980)
                     /locus_tag="VHX39_23910"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HEX3994229.1"
                     /translation="MATIASDPYPWPFDGSLAPGNTALIVIDMQTDFCGVGGYVDKMG
                     YDLSLTRAPIGPISAVLAALRPKGYTIIHTREGHRPDLSDLPANKRWRSRQIGAGIGD
                     PGPCGRILTRGEPGWEIIPDLAPLPGEIVIDKPGKGSFYATDLELVLRTRGITNIILS
                     GITTDVCVHTTMRDANDRGFECLLLSDCCGATDPGNHAAALHMIKMQGGVFGAVSDSA
                     TFLAGLP"
     gene            complement(2983..>3192)
                     /locus_tag="VHX39_23915"
     CDS             complement(2983..>3192)
                     /locus_tag="VHX39_23915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3994230.1"
                     /translation="RWNPINCIYASLLFGAAGALGPSLQTVGITWGYYLFYAAPYVVT
                     LVVLIITARGGRSLRGMPGQLSIGR"
BASE COUNT          649 a         1150 c          867 g          526 t
ORIGIN      
        1 cacccattcg gaggaaatgg ccggtggcaa atctcacggg aaaaatcgcc tgggtcaccg
       61 gcgccggcag cggcataggc gaagccgccg ccctggcatt ggccgaggac ggtgcaacgg
      121 tgatcttgac cgggcgcacg caagacaagc tggaaaacac cgcccgccgc atccacaacg
      181 ccggccaggc ccatgtgcag cccgcagacc tcacggacaa ggcgcaggtg cggcaggtcg
      241 gcgcctatat caaggcgacg ttcgatcgat tggatatcct ggtgaacaac gccggcgtga
      301 acatcctcga ccggcactgg gacaagctga cgccggaaag catcgacatt atggtacagg
      361 gcaacctgac cgccgcgctc tattgcgtcg cggtcgctct gccgttcatg cgggcgcaac
      421 aggacggcct gatcatccac accgcgtcca tggccggacg ttttatcggc ggagtcgccg
      481 gaccgatcta cgtcgccgcc aagcacggca tcgtggcaat gagccatgga ctgaacatgg
      541 aggaatgcgt caacggcatc cgctccacgg tgttcctccc gggcgaagtc gccaccccga
      601 tcctcgacca gcggccgaac ccggtcggcc ccgaggtgcg cgccaggatg gtgcaaccgg
      661 aggattgcgg cgacctgatc cgttacatcg ccaacctgcc gaagcatgtg gtgatgaacg
      721 aggttcatct ggcaccgacg cacaaccgca gctacgtcgc caatctacaa cggcgcctct
      781 gaaacagatg cctaatgctg ccccagcata tgccggccga tctcttgcgg gtcggcgccg
      841 tcagccgcca tttcgtgcgc gaccttgccg tcatgcatca ccacgatccg gtcggcgagt
      901 tccaggatct cgtccagatc ttccgagatc agcagcaccg ccgttccggc attgcgcgcc
      961 gccatgatcc gcgcccgcgt ctccgccacc gctttcacgt ccagtccgaa acacggattg
     1021 gcaacgatca gcagccgcac atcgccatcc agttcccgcg ccagaacaca gcgctgtaca
     1081 ttaccacctg acagcacccc aatcggcgcc tgaggcgacg gcgtccggat gccgtatgcc
     1141 gcgatcatct cccgagcccg cgtcgccatg ccggcacgat ccagccagaa ccggcgagcc
     1201 ccgccatccc ccacatcgaa acgacgaaga ttcaaattgt ccaccacagt catcggcggc
     1261 acgcaaccat tgcgtaacgg ttcttccggc agcacccgca catcccgcgc ctgggattgc
     1321 acccggctgg catcgtaggc cgcgccatcc accaggatag agccggattc aaccggtcgc
     1381 tgcccgccca gaacctccac cagatccttc tgcccgttgc ccgaaacgcc ggcgatcccg
     1441 acgatctcat gcgcatgcac ggtcattgac tcgatcgaca atcccttgcg cccgccatcc
     1501 gccgccgtat gcaaaccgga caccgccaat cgagcctcat cggaaggcgc gcccttgcgt
     1561 tccgggttct tcggtgcatg cggttcaccg atcatcatcg ccgtcaaatc catcggcccc
     1621 agatcgctca ccttcccggt gcccgccatc cgcccgcgcc tcagcaccgt cacctcatcc
     1681 acgaaggcgg cgacctcttt cagcttgtgc gtaatgatca cgatcgtcag cgcgccggag
     1741 tgcgccagcc cgcgcaccag ccccagcatc tcagtcgcct cctgcggcgt cagcaccgag
     1801 gtcggctcgt ccagcaccag gaattttcgt tccagataaa gctgcttgat gatctcggtc
     1861 ttctgccgct caccggccgc gagactgccg acttccacct ccagcggcac cttgaacggc
     1921 atccgctcca tgaaccgtgt caatccggca atctccgccc gccagttgat cacgctcggc
     1981 acgttctgcc gcgacatcac cagattttcc gccaccgtca tcgacggaac cagggtaaaa
     2041 tgctgataca ccatgcccaa acccaaggca tcggcatcag ccggacgctc gattgaagcc
     2101 tcccgtccat cgacgatgaa acccccatcg tccgcccggt aataccccag caaacacttc
     2161 accaacgtgg acttgccggc accgttctca cccagcaaac catgcacgct gccaggcgtg
     2221 accttcagcg aaacatccga caaagcctga aatccgccga agcgcttgcc gataccaacg
     2281 gcctcaacgc cgatcgcctg cgtcatggca atccagccag gaacgtcgcg ctgtcgctga
     2341 cggccccgaa cacgccgccc tgcatcttga tcatgtgcaa cgccgccgcg tggttgccgg
     2401 gatcggtggc gccgcagcaa tcggacagca gcagacactc aaacccacgg tcattggcgt
     2461 cccgcatcgt cgtatgcacg cagacatccg tggtgatacc ggaaagaatg atgttggtga
     2521 tgccgcgagt ccgcaggacc agttccaggt cagtggcata gaaactgccc ttgcccggct
     2581 tgtcgatcac gatctcacct ggcagaggcg ccaggtccgg aatgatctcc caccccggct
     2641 caccgcgcgt caggatgcgg ccacacgggc ccggatcacc gatcccagca ccgatctgcc
     2701 gcgatcgcca gcgcttgttc gccggcagat cggaaagatc gggccgatga ccttcccgcg
     2761 tatggatgat tgtatagccc ttcggccgca gcgccgccag caccgccgag atcggcccga
     2821 tcggcgctcg ggtcagcgac aggtcatatc ccatcttgtc gacatagccg ccgacgccac
     2881 agaaatcggt ctgcatgtcg atcacgatca gcgcggtatt ccccggcgcc agcgatccgt
     2941 cgaacggcca cggatacggg tctgatgcga tcgttgccat cttcatcgtc caatcgatag
     3001 ttgtcccggc atgccgcgca gggaccggcc gccacgagcg gtgatgatca acacaaccag
     3061 cgtcacgaca tagggcgccg cataaaacag atagtagccc caggtgattc ccaccgtctg
     3121 caacgatggt cccagcgcgc ccgccgcccc gaacagcaat gacgcgtaga tgcagttgat
     3181 cgggttccag cg
//
LOCUS       DATAVD010001254         2784 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3657467, whole genome shotgun sequence.
ACCESSION   DATAVD010001254 DATAVD010000000
VERSION     DATAVD010001254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2784
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3657467"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..827)
                     /locus_tag="VHX39_23920"
     CDS             complement(<1..827)
                     /locus_tag="VHX39_23920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994231.1"
                     /translation="MQPDSPPIDSPIEVPRWDSASAQRRAVSLGRWASLGSFALMLCL
                     WLAIIGSTWSVHETAINRAMASADNLSAAFCQQVNYTLGTIKAAMDLTARDIRADPTG
                     FQLDQWSKELPALAHPTMFVSLVDATGKVISTTIKPGVAGIDLSDLEAFNVHLALINP
                     DLYISQPVISHVSGHAIIELSRRVDDANGHFLGILVFALAPDDLIPLYRTVKLGPRGI
                     IALVGADGLLRARFGDAPEATAATSDEPWPVMLDPGANDGVVQSSAVDGIARIYSMRR
                     "
     gene            complement(895..1776)
                     /locus_tag="VHX39_23925"
     CDS             complement(895..1776)
                     /locus_tag="VHX39_23925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004272385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3994232.1"
                     /translation="MLGPTSRIYFSQRLRLHYVDWGNPDAPPLLLVHGGRDHCRNWDW
                     VAAALQDEYHVIAPDLRGHGDSQWSDSGHYTAANYIYDLAQLIHQRHLAPLRIIGHSL
                     GGNIALRYTGIYPENVCRLVAIEGLGPGPKSHAEADRKPIADRMRSWIDEQRAYAARV
                     PRRYATLEDAHQRMHEANAHLTTEQTRHLTEHGVNQNEDGTYSWKFDQYVRLWPAYDM
                     TRDAIARLWSRITCPTLLIHGLDSWARPPAEDGRMDYFQNARALGVAGAGHWVHHDQL
                     EVFLREVRGFLRGSTAA"
     gene            complement(1786..>2784)
                     /locus_tag="VHX39_23930"
     CDS             complement(1786..>2784)
                     /locus_tag="VHX39_23930"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3994233.1"
                     /translation="RVFLAPGYASARWRLANDWDLQYDWDEMNGRGGFADALALIDVA
                     EKHPSGRLSGIVCPSQIDTCTADLLHDSYQAATERNLPFTTHCAQSVNEFHEMVKRHG
                     ITPVQWAKQIGILGPRTILGHAIFIDEHSWLHWHSRADLGLLADSGTSVAHCPSPFAR
                     YGHGMEDFGRYRRAGVNIGIGTDVAPHNLIEEMRLAAVVARILAEDITTTTTAEVFRA
                     ATAGGAAALGRDDIGRLAPGAKADIVLVDLKNPFMMPARDPLRSLIYTAADRAIRDVY
                     IAGTQVVQNGKILTLDHAAALEALTEAQQRMLSGVRQRDYKGRTADEVIPLSLPTL"
BASE COUNT          512 a          831 c          917 g          524 t
ORIGIN      
        1 cgccgcatcg aatagattct ggcgatgcca tcgaccgcgc tggactgcac aacgccgtcg
       61 ttggcacccg gatcaagcat gaccggccac ggttcgtcgc tcgtcgcagc ggtcgcttcc
      121 ggcgcatcgc cgaagcgtgc gcgcagcagc ccgtccgccc ccaccagtgc aatgattccc
      181 ctcggtccca gcttcaccgt gcggtacagc gggataagat cgtccggcgc cagggcaaac
      241 accaggatgc caaggaaatg cccgttggca tcatccacgc gtctggagag ctcgatgatc
      301 gcgtggccgg acacgtggct gatcaccggc tggctgatgt acaggtcggg attgatcagc
      361 gcgagatgca cgttgaaggc ttccagatcg ctcaggtcga tgccggcgac accaggcttg
      421 atcgtggtgg agatgacctt tccggtcgcg tcgaccagcg acacaaacat cgttgggtgc
      481 gccagggccg gcaattcctt ggaccactga tcgagctgga acccggttgg gtcggcgcga
      541 atgtctcgcg cggtcaggtc catcgcggcc ttgatcgtgc ccagagtata attcacctgt
      601 tggcagaacg ccgcgctcag gttgtcggca gacgccatgg cgcgattgat cgcggtctca
      661 tgcaccgacc aggtggagcc gatgatcgcg agccagagac acagcatcag ggcgaacgag
      721 cccagacttg cccaacgccc caacgagacc gcgcgccttt gggctgacgc tgaatcccag
      781 cgcggcactt caattggact gtcgatcggg ggggaatcgg gctgcatgac tcgatgcgtg
      841 attcagtgga gaaaggatcg catgacgaga cactaacgta aatacgatag gaggtcaggc
      901 ggccgtgctg ccccggagaa agcctcgcac ttcgcgcaga aatacctcga gctggtcatg
      961 gtggacccaa tggccggcac cggccacgcc cagagcgcgc gcattctgga aatagtccat
     1021 tcgcccatcc tcggcgggcg gcctggccca ggagtcgagg ccgtgtatga ggagggtggg
     1081 acaggtgatg cgagaccaca ggcgggcgat ggcgtcgcgg gtcatgtcgt aggcgggcca
     1141 cagccggacg tactggtcga atttccagct atacgtgccg tcctcgttct gattgacgcc
     1201 atgctcggtc aggtgccggg tttgttccgt ggtcagatgc gcgttggctt cgtgcatgcg
     1261 ctgatgcgcg tcctcgaggg tcgcgtaacg ccgcggcacg cgggcggcgt aagcgcgttg
     1321 ttcgtcgatc cagctgcgca tgcggtcggc gatcggtttg cggtcggcct cggcatgcga
     1381 tttcggaccg ggaccaagcc cttcgatggc gaccagacgg cagacgtttt caggatagat
     1441 cccggtgtag cgcagcgcga tattgccgcc gagcgaatgg ccgatgatgc gcaacggcgc
     1501 gaggtggcgt tgatggatca gttgcgcgag gtcgtagatg tagttcgccg ctgtgtaatg
     1561 ccccgaatcc gaccattgcg agtcgccgtg accgcgcagg tcgggtgcga tgacatggta
     1621 ttcgtcctgc aacgcggcgg cgacccagtc ccagttgcgg caatgatcgc gcccgccgtg
     1681 caccagcaac aatggcggtg catcggggtt gccccaatcg acatagtgca gtcgtaaacg
     1741 ttgcgagaag tagatgcgag acgttggacc gagcataaag cgtccttaaa gtgtcggcag
     1801 cgacagcggt atgacctcat cggcggtgcg gcctttgtag tcgcgttgcc gtacgccgct
     1861 caacatgcgt tgctgcgcct cggtcagtgc ttccagcgcg gcggcgtggt caagcgtcag
     1921 gattttgcca ttttgaacca cttgcgtgcc ggcgatgtag acgtcgcgaa tggcacggtc
     1981 tgcggcagtg taaatcaagg atcgcagcgg gtcgcgagcc ggcatcatga acgggttctt
     2041 caggtctacg aggacaatgt cggctttggc gccgggtgcc agccggccga tatcgtcgcg
     2101 gccaagcgct gctgcgccac ctgcggtcgc agcccggaat acctcggcgg tggtcgtcgt
     2161 cgtgatgtct tccgccagga tacgtgcaac gacggcggcc agccgcattt cctcgatcag
     2221 attgtgtggc gcgacgtcgg tgccgatgcc gatattgacc ccggcgcggc ggtagcggcc
     2281 aaaatcctcc atgccgtggc cgtagcgtgc aaagggcgat ggacaatgcg cgaccgaggt
     2341 gccgctgtcc gccaacaggc caaggtcggc tcggctgtgc cagtgcagcc aggaatgttc
     2401 atcgatgaag atggcgtgac ccaggatggt gcgcggcccg aggataccga tctgcttcgc
     2461 ccattgcacc ggcgttatgc cgtgccgctt caccatttca tggaactcgt tgacgctttg
     2521 cgcgcaatgc gtggtgaacg gcagatttct ttcagttgcc gcctggtacg agtcgtgcag
     2581 caggtccgcc gtacaggtgt cgatttgcga cgggcagacg atgccggaca gccggccgga
     2641 gggatgcttt tccgcaacgt cgatcaatgc cagggcatcg gcaaagccgc ctcgcccatt
     2701 catttcgtcc cagtcatatt gcagatccca atcgttcgcc aaccgccagc gcgccgaagc
     2761 atatccaggc gcgaggaaca cccg
//
LOCUS       DATAVD010001255         2394 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_678839, whole genome shotgun sequence.
ACCESSION   DATAVD010001255 DATAVD010000000
VERSION     DATAVD010001255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2394
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_678839"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            417..>2394
                     /locus_tag="VHX39_23935"
     CDS             417..>2394
                     /locus_tag="VHX39_23935"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEX3994234.1"
                     /translation="MSDAPNRRRRTGTTARNAKAEPQEAAAAPHPPDHARPIPIVGIG
                     ASAGGLNAFKAFFAEMPPDTGIGFVLVQHLDPSHKSILTELVGRQTQMPVVEAEDGMP
                     VAPDRVHIIPPDATLTIAKGILHVDRPAPPRQRRFPIDTFFESLAEDQEENAAAVVMS
                     GIGSDGTLGIKMIKEHGGLTLAQSEHDQLAMTGMPQSAAATGLVDNVLRVEDMPARLI
                     EYQQHLIAAAGQSDDNEAHQVTARQMATITLLLRSGLGHDFANYNENTLARRIQRRMQ
                     VLRTDTVQHYIRHLRNEPRERELLFQELLINVTEFFRDQAAFEVLETDVLPTLLAGKT
                     DADQVRIWVPGCATGEEVYSIAILVKEEMDRRAINPQVQIFGTDIDESAVAVARSGHY
                     PKTKGVVSAERLARWFVAEVDGYRVTRQIREMCVFSPHSVVKDPPFSKLDLVSCRNLL
                     IYLNPDLQERVVRMFHYALRPGGILFLGPSEGVTRGAHLFEAVDAKYRLFRRRDTTTA
                     THFPDFRTPEELSPTAPRLPPARLTDRIEKVTLAVLEKHSPAYVVVNRQHEIIRFSGG
                     EIGRYLEPSAGVATLGLFGILRRSLRQTVRAALEQAAATKMAAPRHRVRIKIGSEIRA
                     INVIVEPIAVDGPEPSLSVVAFQDLGAVAESVRAR"
BASE COUNT          484 a          764 c          726 g          420 t
ORIGIN      
        1 tgcggaaatc cagagagaat aaatctgatg ctcgtacgca ggcgcacgat ccgattgact
       61 tcaggcgatc cgaagctccc cgccaccggt ggtttgcatt tccccgggat cgacgatagg
      121 tttccacgga aacaagcata agacgcggat cgtggctctc gggcccatca cctaagatca
      181 atttgggctg ccgcaggttc ctccaaaccg agagcaccaa ttgtcgaccg gacccatgcg
      241 atacgcacgc gttttgacgt ttgatccctt cgcgcagaca acctcggctc gaccggggga
      301 ctaatcggcg cacagcactg gttcagatgg tccggtcgag ccgtaccatc acgcgggagg
      361 ccaggttcgt gcggcaaatc agatgctgag cagatccaac cgatggcaac cgcgccatga
      421 gtgacgcgcc gaaccgccgg cgccggaccg gaacaacggc gcgcaacgcc aaagcggagc
      481 cgcaggaagc agcggctgcg ccgcaccctc cggatcatgc gcgcccgata ccgattgttg
      541 gcatcggcgc ctccgccggc gggcttaacg cgttcaaggc gttcttcgcc gagatgccgc
      601 cggacaccgg gatcggcttc gtattggtgc aacacctcga ccccagccat aaaagcatcc
      661 tgaccgagct ggtcggccgg caaacgcaaa tgccggtggt cgaggccgag gacggcatgc
      721 cagtcgcccc cgatcgcgtc catatcattc caccggacgc caccctgacg atcgccaaag
      781 gcatcctgca cgtcgaccgg cccgcgccgc cgcggcaacg ccgtttcccg atcgatacgt
      841 tcttcgaatc cctcgccgaa gaccaggaag aaaacgccgc ggctgtcgtt atgtccggca
      901 tcggcagcga cggcaccctg ggcatcaaaa tgatcaagga gcatggcggc ctgacgctgg
      961 cgcaatccga gcatgatcaa ttggccatga caggcatgcc gcagagcgcc gccgccaccg
     1021 gcctcgtcga caatgtgctg cgggtcgagg acatgccggc ccgcctgatc gaataccaac
     1081 agcatctgat cgctgccgcc ggccaaagcg acgacaacga ggcgcatcag gtgacagcgc
     1141 ggcaaatggc aacgattact ttgttgttgc gctccggatt gggccacgat ttcgccaact
     1201 ataacgaaaa caccctggcg cgccgcattc agcgccggat gcaggtactg cggaccgaca
     1261 cggttcagca ctatatcagg cacctgcgca acgagccgcg cgaacgcgaa ctgctgttcc
     1321 aggaactgct gatcaacgtc accgaattct ttcgcgatca ggccgccttc gaggtgttgg
     1381 aaacggacgt gttgccgacg ctgcttgccg gcaaaaccga tgccgatcag gtccgtatct
     1441 gggttccggg ctgcgcgacg ggcgaggaag tctattcgat cgcgatcctg gtcaaggaag
     1501 agatggaccg gcgcgcgatc aacccccagg tacagatttt cggcaccgac atcgatgaga
     1561 gcgcggtcgc ggtggctcgt tccgggcatt acccaaaaac gaaaggggta gtgtcggcgg
     1621 aacgtctcgc gcgctggttc gttgccgagg tcgatggcta tcgcgtgacc cggcagatcc
     1681 gggaaatgtg cgtcttctcc ccccacagcg tggtcaaaga tccaccgttt tccaagctgg
     1741 atttggtgtc gtgccgaaat ttgctgatct atttgaaccc cgacctgcaa gagcgcgtgg
     1801 tgcgcatgtt tcactatgcg ctgcggcccg gcggtatctt gttcctcggc ccatcggaag
     1861 gcgtcacgcg tggcgcccat ctgttcgagg ccgtcgacgc gaagtatcgc ctgttccggc
     1921 gccgggatac gaccaccgca acgcacttcc cggattttcg tacgcccgag gaattgtcgc
     1981 cgaccgcgcc tcggctgccg ccggcgcggc tgaccgatcg gatcgagaaa gtcacgctcg
     2041 ctgtcctgga aaagcactcc cccgcttacg tggtggtcaa tcggcagcat gaaatcatcc
     2101 gtttctcggg cggcgagatc ggccgctatc tggaaccgtc tgccggcgtc gcgacgctcg
     2161 gcttgttcgg aatactgcgc cggtcgttgc ggcaaaccgt gcgcgcggca ctggaacagg
     2221 cggccgccac gaaaatggcc gcgccgcggc accgggtgag gataaaaatt ggtagcgaga
     2281 tcagagccat caacgtgatt gtcgagccca tcgccgtcga cggtcccgag cccagcctga
     2341 gcgtcgtggc cttccaggac cttggtgccg ttgccgaatc ggtacgagca agaa
//
LOCUS       DATAVD010001256         3547 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3095058, whole genome shotgun sequence.
ACCESSION   DATAVD010001256 DATAVD010000000
VERSION     DATAVD010001256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3547
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3095058"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            117..824
                     /gene="fliP"
                     /locus_tag="VHX39_23940"
     CDS             117..824
                     /gene="fliP"
                     /locus_tag="VHX39_23940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015072449.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HEX3994235.1"
                     /translation="MKRLLWLLLLFPAVAHAQSVAIDLGSAGQAGATARIVQLTALVT
                     VLSLAPSLLVMATAFTRIVIVLSLLRTALGAQGAPPNTVLIGLALFLTWFVMQPVFEH
                     SWVAGIQPMMDNKIGELDGIKAAAEPFRDFMLHNLRSADLSFFQVLAHAAPGDESWRI
                     VMPAFLIGELRRAFEMGFLLFLPFLVIDMVVASVLMSLGMMMLPPNVVSLPFKLVFFA
                     TVDGWQLVSGGLVRTFG"
     gene            complement(821..1567)
                     /locus_tag="VHX39_23945"
                     /pseudo
     CDS             complement(821..1567)
                     /locus_tag="VHX39_23945"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
     gene            complement(1655..2257)
                     /locus_tag="VHX39_23950"
     CDS             complement(1655..2257)
                     /locus_tag="VHX39_23950"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEX3994236.1"
                     /translation="MSTARHMSHMTREEFLDWADAQDQRYEFDGFQPVAMTGGTLDHS
                     QIAQNIYLGLGTRPRGTGCRTPGPDAGIATIGDAVRYPDALVTCTKAPGTDRVTPGVA
                     VVFEVLSPTSGRVDRIEKLREYLAVPSIRRYVILEHSSVGLTDHVRLKDGDPWSTTAL
                     TDGDILRMPEIGIEIPIAEFYEGTDLMLPTEPAAGTATAP"
     gene            complement(2320..2736)
                     /locus_tag="VHX39_23955"
     CDS             complement(2320..2736)
                     /locus_tag="VHX39_23955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994237.1"
                     /translation="MAVSLQVREVQVRLFVPPDQLRETVAFYKALTGGRCTLHFPFPE
                     RGMELASVSSPAVSFLIIGGDEASIRPFRETKLTMLVDDIETVAPAMLALGAQILQPV
                     TPVPTGFQTRARHPDGLVVEYVQHTAAADRYRVTDL"
     gene            complement(2740..>3547)
                     /locus_tag="VHX39_23960"
     CDS             complement(2740..>3547)
                     /locus_tag="VHX39_23960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide deacetylase"
                     /protein_id="HEX3994238.1"
                     /translation="KPKAWPDGARCAVSISFDADHETIPLRDGDESPMRISQGQYGAR
                     QAIPRIRRLLERESVPASFYYPAVSALLHPEEVRALADDGHEIGIHSWIHEANTSLPR
                     EAERELTFRARDTLAKIAGREPVGMRTASWDFSVNTLDIIREMKLLYDSSLMADDDPY
                     ELLDHDEPTGIIELPPEWIRDDAVYYNFVRFSALRPYTPPSAVGEIFTAEFDGAWEEK
                     GLFLLTMHPHITGHRSRMPVLERLIRHMKAKGDCWFATHAQVAEWCRDNA"
BASE COUNT          626 a         1104 c         1095 g          722 t
ORIGIN      
        1 aatcttgatg ctcgccgcag cctgcatttg atccagcacg gtgaccgttc agtcctgctg
       61 ctgacgggtg gcgaaaccga cgtcgtggtt ggttggctgg atgcgccgag atcgccatga
      121 agcggttgct ctggctgctg ctgttgtttc ccgcggtggc gcatgcgcaa tccgtcgcga
      181 tcgatctggg ctctgccggc caggccgggg caaccgcgcg gatcgtgcaa ctcacggcgc
      241 tggtcaccgt gttgtcgctg gcgccgagcc tgctggtcat ggcgactgcg ttcacacgca
      301 ttgtcattgt gttgtcgttg ctacgcactg ctctgggcgc gcagggggcg ccaccgaaca
      361 cggtcttgat cggcctcgcg ttgtttctga cgtggttcgt gatgcaaccg gtgttcgagc
      421 attcctgggt cgccggaatc cagccaatga tggacaacaa aatcggtgaa ctcgatggca
      481 tcaaagccgc tgccgagccg ttccgtgatt ttatgctgca caatttgcgc agcgccgatc
      541 tgagcttctt tcaggtcctg gcgcacgccg cgcccggcga cgagtcatgg cgcatcgtca
      601 tgccggcgtt cctgatcggc gagctgcggc gtgcgtttga aatggggttt ctgttgtttt
      661 tgccgttcct ggtcatcgac atggtcgtgg ccagcgtgtt gatgagcctc ggcatgatga
      721 tgctgccgcc caacgtcgtg tcgttgccgt tcaaactggt gttcttcgcc accgtcgatg
      781 gttggcagct ggtgtccggt ggtctggtgc gaacgttcgg ttaaagcaat tgtccaccat
      841 ccactgcgat ggtttgcccg gtgacccagc ccgcgaacgg cgaggcgagg aacagtgcca
      901 cattggcgat ttcctcggga tgcccgaggc gtccgaacgg aattgaactc aataccgcgt
      961 tgtacagccg gggattgtcg gacttacgcc ggtcccagac gccgccggga aactcgatcg
     1021 aaccgggcgc gatacaattc acccggatgc cgtctttggc gtacatcgcc gcctggctgc
     1081 cagtttaatg gatgcatgcg gctttgatcg cgccgtacgg cggctgccgc gcagcggtgt
     1141 gcatcgctgc gatcgaggag atgttcaaca cgctgccctt tgacgcctgc agcgccggca
     1201 atgcttcctg ggtcgcgtgc acgatcgcca tcatgtcgat cgcgacgctg ctggcccagc
     1261 ctttctcgtc atccgatgat ccgaatgccg aggcgttgtt gaccagaaaa tcgacgccgc
     1321 cgagggcctc ggtcgcggtg cggatgtagc ctcgcaccgc atcggcgttg gccagatcgg
     1381 ccgaggcggc gtgggctttg tggccgtact gggcgatctc ggcacgggcg gtttccagcg
     1441 ttgctgcgtc tcgggcgcag atggagacgt cgcctccagc ggcggcaaag cccagggcaa
     1501 tggccttgcc aatgccgcgg ctgccgccac agacgatggc tttcctgccg gtgaagtcga
     1561 tgagcatggg aggtctccgg gccagatcag tgccagcgtg gcaatgggag aggggcggcg
     1621 caagtggagg gtcgatgtcc gattgaaacc ggacctatgg cgccgttgcc gtgcccgccg
     1681 caggttcggt cggaagcatg aggtcggtgc cttcgtagaa ctcggcgatg ggaatttcga
     1741 tgccgatttc cggcatgcgc aggatatcgc cgtcagtcag ggcggtcgtg gaccatggat
     1801 caccatcctt caaccggacg tggtctgtga gtccaacgct ggagtgttcc aggatgacgt
     1861 aacggcgaat cgacgggacg gcgaggtact cacgcagctt ttcaatgcgg tcgacacgcc
     1921 cggaggtcgg actaaggacc tcaaagacca ccgctacccc gggggtgaca cggtccgtgc
     1981 ccggcgcttt cgtgcaggtc accagcgcgt cgggataccg gaccgcgtcg ccgatggtgg
     2041 caatacctgc atctggccct ggcgttcggc aaccggttcc tctcggccgt gtgccgaggc
     2101 cgagatagat gttctgggca atttggctgt gatcgagcgt accccccgtc atggcaaccg
     2161 gttggaagcc atcgaactcg taccgctgat cctgggcgtc agcccagtcc agaaattcct
     2221 cccgcgtcat gtgggacatg tgccgagcgg tgctcatgac cggaagactg gcataacctt
     2281 ccgttccttg tctgccatcg cgtttaggac ccgtcgccgt caaaggtccg tgacacgata
     2341 acggtccgcc gccgcagtgt gctgcacata ttccaccacc aacccatccg gatgccgcgc
     2401 tcgtgtctgg aagcctgtcg gcaccggtgt cactggctgc aggatctgtg cccccaacgc
     2461 caacatcgcc ggagcgaccg tctcgatatc gtcgaccagc atggtcagtt tcgtctcgcg
     2521 gaacggacgg atgctggcct cgtcccctcc gatgataaga aacgaaacgg cgggagaact
     2581 gaccgacgca agttccatac cgcgttccgg aaacggaaaa tgcagcgtgc aacgtccgcc
     2641 ggtcagagcc ttgtaaaatg caacagtttc gcgcagctgg tcgggcggaa cgaacagcct
     2701 gacctgaacc tcccgcacct gcaacgaaac cgccatgctt cacgcgttat cccggcacca
     2761 ttccgccact tgcgcgtgcg ttgcgaacca gcaatcgcct ttcgccttca tatgccggat
     2821 cagtcgctcc agcaccggca tccgcgagcg gtggccggtg atatgcgggt gcatggtcag
     2881 caagaacagc cctttctcct cccacgcgcc atcgaattcc gcagtgaaaa tctcccccac
     2941 cgcggacggc ggcgtatacg gccgcaatgc cgagaagcgc acgaaattgt aataaactgc
     3001 atcgtcgcgg atccattccg gcggcaactc gataattccg gtcggttcgt catgatccag
     3061 caattcgtac ggatcatcgt ccgccatcag cgaactgtcg tacagcagtt tcatttcgcg
     3121 gatgatatcc agcgtgttga ccgagaaatc ccaactcgcc gtgcgcatcc cgaccggctc
     3181 ccggccggcg atttttgcca atgtgtcgcg cgcccggaag gtcagttctc gctccgcctc
     3241 ccgcggcagc gatgtgtttg cctcgtggat ccaggaatgg atgccgatct cgtgcccgtc
     3301 atcggccaga gcacgcacct cctccggatg caacaacgcc gagacagccg ggtaatagaa
     3361 actcgccggg accgactcac gttccaacag ccgccggatg cgagggatcg cctgccgggc
     3421 gccgtactgc ccctggctga tccgcatcgg gctttcatcg ccatcgcgca acggtatcgt
     3481 ttcgtgatcc gcatcaaagg aaatcgacac agcgcaacgc gcgccgtcgg gccacgcctt
     3541 cggcttc
//
LOCUS       DATAVD010001257         1718 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3469160, whole genome shotgun sequence.
ACCESSION   DATAVD010001257 DATAVD010000000
VERSION     DATAVD010001257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3469160"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            288..716
                     /locus_tag="VHX39_23965"
     CDS             288..716
                     /locus_tag="VHX39_23965"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEX3994239.1"
                     /translation="MAGAFGHLKSMSFDDALRLTGCDADFYALQKDAGAGGDREYQRN
                     NKVTDLGPDLNDFADTAAAIMQLDLVISIDTAVAHLAGALGKPVWIMLSHQQDWRWLR
                     HGSSTPWYPSAKLFRQTSPNDWTDVIDAVKFELDRRIAGS"
     gene            complement(759..>1718)
                     /locus_tag="VHX39_23970"
     CDS             complement(759..>1718)
                     /locus_tag="VHX39_23970"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX3994240.1"
                     /translation="SAGFARGRECDRHGDYNAAFAAYSLANLLSRERRRAEGHGFSEA
                     ELRDLVDWLTTAIGPRMFAATAGWGNPSELPVFVVGMPRSGTTLVEQIAASHPRVFGA
                     GERMDITGILTALSGEYTAGSPVEWDQAAVRRETTAHLLRLRDLGDTATRVIDKLPDN
                     IFSLGQIAVLFPGARVIVCRRDPRDVCLSCFFQSFADDTMMWTDDLAGCGIRARETER
                     LLDHWRKVLPLRILEVQYETLVANLEAESRRLIDFLGLEWDPVCLSFHETERTVLTAS
                     HWQVRQPLYDSSVGRWRHYQQHLEPLLKELAPVLPGENLLVSG"
BASE COUNT          354 a          560 c          487 g          317 t
ORIGIN      
        1 tggtgcatgc ccttcaagcg aaggtcattc ttcgggtgcc ccgttccctg gcgagactaa
       61 tgacgacagt acatggtggg tccgcagtga ttgtcgccga cgaagacgtc ccccaatatg
      121 attttcagac tcccctgatg agcctgccac tggcactggg taccacgccg gccacgatac
      181 catccgcagt accctaccta agcgccgatc cggctctggc tgcccagtgg gccacacggt
      241 tcgggactca taccagacag cgcgtcggcc tggtatggtt cggctcgatg gccggtgcct
      301 tcggacatct caagtcgatg agcttcgacg atgccctaag gctgaccggc tgcgatgcag
      361 atttctacgc attacaaaaa gacgccggcg ccggtggcga tcgagagtac cagcggaaca
      421 acaaagtgac cgacctcggg ccggatctga acgatttcgc cgacacggcc gccgcgatca
      481 tgcaactcga cctggtgatc tcaatcgaca ccgccgtggc ccatctggct ggcgctcttg
      541 gcaagccggt ctggatcatg ttgtctcatc agcaagattg gcgttggttg cgtcacggct
      601 cctcgacgcc ctggtatccc tccgcaaagc tgttccggca gaccagcccc aacgactgga
      661 ccgacgtgat cgatgcggtg aaattcgaat tagaccgccg catcgctggt tcttgatagg
      721 acagcggcac ccggccgcag ccgtcgccgc tgatagactt accctgaaac caacagattt
      781 tctcccggca gcacgggcgc cagttccttc agcaacggtt ccagatgttg ctgataatgc
      841 cgccagcgac cgaccgaact gtcatacaat ggctggcgca cctgccaatg gctggccgtc
      901 aacaccgttc gttccgtctc gtgaaacgac aaacacactg ggtcccattc caacccgagg
      961 aaatcgatca gtcggcggct ttccgcctcc aaattggcga ccagggtctc gtactgaacc
     1021 tccaggatgc ggaggggcag taccttgcgc cagtggtcca gcaaacgctc ggtttcgcgc
     1081 gcccgaatcc cgcagcccgc gagatcatca gtccacatca tcgtatcgtc ggcgaaagac
     1141 tggaagaagc acgacaggca cacatcccgc ggatcgcgac ggcagacgat aacgcgagcc
     1201 ccaggaaaca gcacggcgat ctggccaaga ctgaatatgt tgtcgggcag tttgtcgatg
     1261 acccgggtag ccgtatcacc caggtcgcgg agacgcagca ggtgtgccgt ggtctcgcga
     1321 cgcacggccg cttggtccca ttcgacgggc gatccggctg tgtactcacc gctcaacgcg
     1381 gtcagaatgc cagtgatatc catgcgttcc ccagcgccga atacgcgcgg atggctggca
     1441 gcgatctgtt ccacgagagt ggtaccggaa cgcggcatcc cgaccacgaa caccggcagc
     1501 tccgacggat ttccccatcc cgccgttgcc gcgaacattc gcgggccaat ggcagtggtc
     1561 agccaatcaa cgaggtcgcg caattccgcc tcgctgaaac catgaccttc tgccctccgt
     1621 cgctcccggc tcagcaggtt ggcgagagaa tacgccgcga acgccgcatt gtaatcgcca
     1681 tgacggtcgc attctcgtcc gcgggcaaat ccggccga
//
LOCUS       DATAVD010001258         3449 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1236379, whole genome shotgun sequence.
ACCESSION   DATAVD010001258 DATAVD010000000
VERSION     DATAVD010001258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3449
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1236379"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..532)
                     /locus_tag="VHX39_23975"
     CDS             complement(<1..532)
                     /locus_tag="VHX39_23975"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEX3994241.1"
                     /translation="MAYRVAVVGATGAVGREMLKTLVERDFPVSEVAAVASGRSAGTE
                     VSFGEKRTLKVQSLDTFDFKGWDIALFSPGASVSAVHAPRAAAAGCIVIDNTSQFRMD
                     ADVPLVVPEVNPHHLRQFSKRGIIANPNCSTIQMVVALKPLHDAFGVKRVIVSTYQSV
                     SGAGKEGMDELFNHTRS"
     gene            801..1796
                     /locus_tag="VHX39_23980"
     CDS             801..1796
                     /locus_tag="VHX39_23980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-carbamoyl-D-amino-acid hydrolase"
                     /protein_id="HEX3994242.1"
                     /translation="MTNRNITVAAAQLGPIQRAEPRQVAVARMIRLLEQAHRRGVELV
                     VFPELALTTFFPRHYEEDIAAADHWFETAMPSNETAPLFDAARGLGIGFHLGFAEIAQ
                     ETDAGGQLRKRHFNTSVLVSPQGEILLKYRKIHLPGHSEFDPRRTTQHLEKRYFEVGN
                     LGFPVIRAPLGGLDGINMGMMICNDRRWPEAWRVLGLQSVELVMLGYNTPSTNQEAGG
                     FEAHHLRVFHSHLTIQAGCYQNACFAVATAKAGVEDGCELFGHSIIVNPQGEIIAMAT
                     SWGDELITADLDLEQCTLGRTTIFAFEKHRRPEAYQRITEQVGAIDPPVWRGPVR"
     gene            1793..>3449
                     /gene="ggt"
                     /locus_tag="VHX39_23985"
     CDS             1793..>3449
                     /gene="ggt"
                     /locus_tag="VHX39_23985"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX3994243.1"
                     /translation="MIAHALRNICCQIGFTRRSDEPAGVAARLHPAELARCVLRCVLL
                     LTITCNGVAHAAAPLATESNQFMVVSAQHLAAEAGAEILRAGGNAIDAAVAMGYAEAV
                     TNPCCGNIGGGGFLVAHLADGRDVFINFRETAPAAASPDMYLDASGAIVPGASLHGWR
                     AAGVPGTVLGLDTALARYGTMPRSTVMAAAIRLARDGFILTRGDVDILDRAAPRLRQN
                     PAIARTFLRRDGTPFEPGDRLIQADLATTLADISANGPDVFYKGHIATAVAKASGGAL
                     TEADFASYQVTEAKPVSCMYRGRVVMSAPPPSSGGTTLCEILNVLEGYELDTMGFHSA
                     RAIHVIVEAERNAYVDRNSFLGDPAFVDNPLERLLSREHADQISGRITDRATPSSELS
                     AVKLPDEPSQTSSYSVLDKAGSAVAVTYTLNGFFGAGVMAGGTGFLLNNEMDDFTIKP
                     GAANSAGLVQGNANRIAPGKRPLSSMAPTILLRDGHVSMVLGSPGGARIITIVLEAIL
                     NVIDYGMSPQEAVDAPRLHHQFLPDTIYAERFALSPDTHLALEN"
BASE COUNT          657 a         1095 c         1034 g          663 t
ORIGIN      
        1 aagaccgggt gtgattgaac agctcgtcca ttccctcctt ccccgcgcca gacaccgact
       61 gataggtgga aacgatcacc cgcttcaccc cgaacgcatc gtgcagcggc ttcagagcca
      121 cgaccatctg aatggtcgag caattcggat tggcgatgat gccgcgcttg gaaaactgcc
      181 gcagatgatg cgggttcacc tcgggcacca ccagcggcac gtcggcatcc atgcggaact
      241 gcgaggtgtt gtcgatcacg atgcaccccg ccgccgccgc ccgtggcgca tgcactgccg
      301 aaaccgacgc gcctgggctg aacagcgcaa tgtcccagcc tttgaagtcg aacgtgtcca
      361 ggctctgcac tttcaacgtg cgtttttcgc caaaggagac ctccgtgccg gccgaacggc
      421 cggacgcgac ggcggcaact tccgacaccg ggaagtcccg ctcgaccagg gttttcagca
      481 tttcgcgtcc gaccgctccg gtagcgccga cgaccgcgac cctgtaggcc atgttgcaca
      541 ctcctgtttg acgagcctcg acacctaatg gcccagagag ccacaggcaa gcaaaacgat
      601 ggaaaatggc gccgcggcgt gatcaaacca tccatgcacc agacgatccg ccggcagtcc
      661 tggcccagac cagagccggc tgcctcgccg aggcgccaga agatcgctct gtttgacgcc
      721 gttcgtccgt ggtttcctgc cgggggcgcg gcgtgccagc cgccgcctgc aatcacggct
      781 gcacaggaga accggacgcc atgaccaacc gcaacatcac cgtcgcggcc gcgcaactcg
      841 gcccaattca acgagccgag ccgcgccagg tcgccgtggc acggatgatc cggttgctcg
      901 agcaggcgca tcgccgcggc gtagagctgg tcgtgttccc cgaactggcg ctgaccacct
      961 tctttccgcg ccactatgag gaagatatcg ccgccgcgga tcattggttc gaaactgcga
     1021 tgccatcgaa cgaaaccgcg ccgttgttcg atgccgcccg cggtctcggc atcgggtttc
     1081 atcttggctt tgccgaaatc gcccaggaga ctgacgccgg cgggcagttg cggaagcgcc
     1141 atttcaacac ttcggtcctg gtcagtccac aaggcgagat cctgttgaaa taccggaaaa
     1201 tccacctccc cggccattcc gagttcgatc cgcgccgcac gacgcagcat ctggagaagc
     1261 ggtattttga ggtcggcaac ctcggcttcc cggtgatccg cgcgccgctg ggtggcctcg
     1321 acgggatcaa catggggatg atgatctgca acgatcgccg ctggccggag gcatggcgcg
     1381 tgcttggctt gcagtcggtc gagctggtga tgcttggtta caacacgccc agtaccaacc
     1441 aggaagccgg cgggttcgag gcacatcatc tgcgggtgtt tcactctcac ctgaccatcc
     1501 aggccggatg ttaccagaat gcctgcttcg ccgttgccac cgccaaagcc ggcgttgaag
     1561 atggctgcga gttgtttggc cactccatca ttgtcaatcc gcaaggcgag attatcgcaa
     1621 tggcgaccag ttggggtgac gaactgatca ccgccgatct cgacctggag caatgcacgc
     1681 ttggccggac cacgattttc gcgttcgaga aacatcgtcg tccggaagcc tatcagcgga
     1741 tcaccgagca ggttggagca atcgatccac cggtctggcg cggcccagta cgatgatcgc
     1801 ccacgcactg cgcaacattt gctgccagat cgggttcacc cgaagatcgg acgaaccagc
     1861 aggtgtagcc gcacggttgc atccggccga actggctcgt tgcgtgctgc ggtgcgtcct
     1921 cctgcttacc ataacgtgca acggtgttgc ccatgccgca gcaccactgg cgaccgagtc
     1981 caaccagttc atggtggttt ccgcgcagca tttggccgcc gaggccggcg cggaaatatt
     2041 gcgggccggc ggtaatgcga tcgatgccgc ggtggcgatg gggtacgccg aggcggtgac
     2101 gaacccgtgt tgcggcaata tcggcggcgg cggttttctg gtcgctcatc tggctgatgg
     2161 ccgcgacgtc ttcatcaact ttcgcgaaac cgctccggcc gcggccagtc cggacatgta
     2221 tctggatgcc agtggggcga ttgtccctgg tgcgagcctg cacggttggc gggcggcggg
     2281 cgtcccgggc accgtgctcg gtctcgatac cgccctcgcc cgctatggca ccatgcccag
     2341 atcgacggtg atggcagccg cgatccggct ggcgcgtgat gggttcattc tgacccgtgg
     2401 cgacgtcgat attctggacc gcgcggcacc ccgtttgcgc caaaaccctg cgatcgcgcg
     2461 gactttcctg cgccgggatg ggacaccatt cgaacctggt gaccggctga tccaggcaga
     2521 ccttgccacg accctggccg atatctcagc caatggcccg gatgtgtttt acaaaggaca
     2581 catcgcaact gccgttgcta aagccagcgg cggcgcgttg accgaagccg attttgcctc
     2641 gtatcaggtg accgaagcaa aaccggtcag ctgcatgtac cggggccggg ttgtcatgtc
     2701 ggccccgccg ccgtcgtcgg gcggcacgac gttgtgcgaa attctcaatg ttctggaagg
     2761 atacgagctg gacaccatgg ggtttcattc cgctcgtgcc atccatgtca tcgtcgaggc
     2821 cgagcgcaac gcttatgtcg atcgcaacag ttttctgggc gatccggctt tcgtggacaa
     2881 tccattggaa cgattgctgt cgcgcgagca tgcagatcag atcagcggcc gcattaccga
     2941 tcgtgcgaca ccgtcatccg agctgagcgc agtcaaatta ccggatgaac cttcgcaaac
     3001 atcaagttat tctgtgctcg acaaagccgg aagcgccgtc gcagtcacct ataccctcaa
     3061 cggctttttt ggcgccggcg tgatggccgg cggcaccggg tttttgctta acaacgaaat
     3121 ggatgatttt acgatcaagc ctggtgctgc aaacagtgct ggcctcgttc agggcaacgc
     3181 caacaggata gcgcccggca aacgtccact gtcctcgatg gcgccaacca tcctgttgcg
     3241 agacggccac gtatcgatgg ttctgggttc gcctggcggc gcccggatca ttacgatcgt
     3301 gctggaagcc attttgaacg tgatcgacta cggaatgtcg ccgcaggagg ctgtggacgc
     3361 accgcgcctg caccaccagt ttctgcccga cacgatttat gcggaacgct tcgcgctatc
     3421 gcctgacact catctcgcgc tggaaaata
//
LOCUS       DATAVD010001259         2003 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2541837, whole genome shotgun sequence.
ACCESSION   DATAVD010001259 DATAVD010000000
VERSION     DATAVD010001259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2003
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2541837"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            577..>2003
                     /locus_tag="VHX39_23990"
     CDS             577..>2003
                     /locus_tag="VHX39_23990"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HEX3994244.1"
                     /translation="MNTGFFIARTDRSSRNPAFLVRLFAWLTEQFSLVSETAGATDGT
                     RPQPPQPRGKPAAMLLAGQIAIGLAIAVTAGLLIMHLRHNALTQATLEQQRLSLILTD
                     QAERALEAVELVQNGLVDQLQRDTVHTPAAFRQYMSGDLMQSELSSRGGMLPQLDAIT
                     IVDSHGNLINSSDPILGLAINVADREYFTVLRDDPGRTMFISQPLQNRRNGKWSAYIA
                     RKVTGPDGEFLGLILGSMRLRYFEELYHAASLGPDATITLRRQDGILLARDPHVDLGL
                     ALAASIRLQSPKPVEANGITYWHVSPIDGQDRLIVERSLLQDTMVVGVTNTTAAVLAD
                     WHRQASWLIAAAIVLEFVVAGAGLLVLRQLRNQHGLGLARAARRKAEAARKAAEASLA
                     VARERSCADRALGIQNLRFEAALSNMLQALFMFDASGRLVVVNGRAAEMFGVPPASIA
                     LGMTVDEVRDLCLANSNLQPEDVEA"
BASE COUNT          375 a          626 c          625 g          377 t
ORIGIN      
        1 cggcgccgaa attctccatg aactcggacc agccgatcag gccgtcgtcg gtggtaatct
       61 tcaggaacga aaaatcacgc cagccggcgt tgcagtgcag gtcttctatc ttcgcaatcc
      121 gcatgacatt ccctcggttc cggtttggcc ggatatgagc aacgggcctt gcacgcgtgg
      181 ccagccggga cactgttccg ggagccacgc ggccgcgtca agtgacagtg cccgatcatg
      241 gtgggccgac ggcaacgtct cattaccgaa ggagaacgga aatgccacgg gtggccgcga
      301 ggtggaatct gcaaatcaat catcatacga acgtcttatc gctgcaccgg tggcgccatt
      361 aagactctgt ttaccattct gtgtcttaat ccgcggcgga tgaaggtcca gaccgccagc
      421 agtaaacggc aaagcgaacg cgcagatgac atcactcgta ttccacgacg gcattcgcga
      481 tcccggttgg gtcgcatggc ataccaaggt cggctgcaaa ccggcggtgc ggacattgtc
      541 gatgccatac cgcgggttcg tgattgagcc agcagaatga acactggctt tttcattgcg
      601 cgtactgatc ggtcatcacg gaatccggcg ttcctggtcc gattgttcgc ctggctgacc
      661 gagcaattct cgcttgtgtc ggaaaccgcc ggtgcgaccg acggcactcg ccctcagccg
      721 ccgcaaccga ggggcaagcc ggccgccatg ctgttggcgg gccagattgc gatcggactg
      781 gcgatcgcgg tgacggcggg cctgctgatc atgcatttgc gccacaacgc gctgacgcaa
      841 gccacccttg aacagcagcg gctttcgctg atcctgaccg accaggcgga gcgcgccctg
      901 gaggcggtcg agcttgtgca gaacgggctg gtggaccagt tgcagcgcga taccgtgcat
      961 acgcccgccg ccttccgaca atatatgtcg ggcgacctca tgcaatccga actgagcagc
     1021 cggggaggca tgttgccgca gctcgatgcc atcacgatcg tcgattccca cggcaacctg
     1081 atcaactcct ccgatcccat cctgggcctg gcgatcaacg tcgccgatcg ggaatacttc
     1141 acggtgctgc gggacgatcc gggccgaacc atgttcatca gccagccgtt gcagaaccgg
     1201 cgcaacggaa aatggtcggc ttacatcgcg cgcaaggtca ccggaccaga tggcgaattc
     1261 cttggtttga tcctcggctc gatgcggttg cgctactttg aggaactgta tcacgccgcc
     1321 tcgctcgggc cggacgctac tatcacgctg cgccgccagg acggcatcct gttggcgcgc
     1381 gacccgcatg tcgacctcgg ccttgcgctg gcagcttcca tccggctgca gtcccccaaa
     1441 cccgtggagg cgaacggcat cacgtactgg catgtaagcc cgatcgacgg tcaggaccgg
     1501 ctgatcgtcg agcgttcgct gctgcaagac accatggtgg tcggcgtcac caacaccaca
     1561 gcggcagtcc tggcggactg gcaccgacag gccagctggc tcattgctgc ggcgatcgtg
     1621 ctcgagtttg tcgtggccgg cgccgggctg ctggtgctgc gacagttgcg caatcagcac
     1681 ggtcttggcc ttgcgcgcgc cgcccggagg aaagctgaag ccgccaggaa ggccgcggaa
     1741 gccagcctgg cagtcgcgcg cgagcggtcg tgcgccgatc gcgctctggg catccaaaat
     1801 cttcgcttcg aggcggcctt gagcaatatg ttgcaggcgc tgttcatgtt cgacgcgtcc
     1861 gggcgcctgg tcgtggtcaa tggcagggcc gccgagatgt tcggagtacc gcccgcgagc
     1921 atcgccctcg gcatgacggt cgacgaagtg cgcgatctgt gcctcgccaa ttcgaatttg
     1981 cagcctgaag atgtcgaggc gat
//
LOCUS       DATAVD010001260         3504 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2351069, whole genome shotgun sequence.
ACCESSION   DATAVD010001260 DATAVD010000000
VERSION     DATAVD010001260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3504
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2351069"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..316)
                     /locus_tag="VHX39_23995"
     CDS             complement(<1..316)
                     /locus_tag="VHX39_23995"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3994245.1"
                     /translation="MSPSQNGGNGGVRWWSEGGVPAADQLVEIVNRHPKGTPFEATQF
                     RAGGRAQPRPDSRGVDNEACKLRFRPILMTTMCALLGSLPLMLGTGTGTGSGLRQPLG
                     YAM"
     gene            568..1242
                     /locus_tag="VHX39_24000"
     CDS             568..1242
                     /locus_tag="VHX39_24000"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HEX3994246.1"
                     /translation="MPALETRNLSRAISGKCLVDDISVQIPPGEVLAVVGPSGAGKSS
                     FLRLLNRLDEPTGGTVLLNGTDYREIAPRELRRRVGMVMQTDYLFPGTVGTNLAFGPR
                     QRGAIFTAEEIAALLDRVGLPGYRDRDVSNLSGGEAQRVSVARTLANAPEGLLLDEPT
                     SALDEASARGIEELLLGIIQERRMTCVIVTHNRSQAIRIAGRTMVLEAGKLVTIGPTK
                     EVLHAC"
     gene            1232..2038
                     /locus_tag="VHX39_24005"
     CDS             1232..2038
                     /locus_tag="VHX39_24005"
                     /inference="COORDINATES: protein motif:HMM:NF015605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3994247.1"
                     /translation="MLAELLNNLSSNLVTGLAQAAGAMLLCLVVVIACRRFAVHVERE
                     AAVSIARGLVQMVFVGVVLALLLHGSLLIGVLILLAMTIAAAVTAARRARNVDGAMLL
                     AFWAIAAGSGVVIAGMLATGTLQTSITMLVPVGSMIIANAMNACAQAAERFRADVTAH
                     VGQVEAGLALGGDPAVTVAPYVQSAVYASLLPRLDMLKSLGLVWIPGVMAGMMVSGTN
                     PVYAGIYQFIIVAMILSASGIAGLVMTLLMRARAFSPAAQLILRSRQSAR"
     gene            complement(2292..3251)
                     /locus_tag="VHX39_24010"
     CDS             complement(2292..3251)
                     /locus_tag="VHX39_24010"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3994248.1"
                     /translation="MDLLHGLGTFVRVVETGSFSAVARETNSNHSSVTRLIGQLEDHF
                     GIRLFHRTTRHLSLTDDGESLLAQARSMLEAAEEMEATLGHRKASPTGRVRVGLPPGM
                     AILITARLSALLRRYPGLSVELVIGERFGDLIEERLDLVVQNGRSDHASAVARAIATF
                     SRAVVAAPAYLEQRGIPQDPTELAQHSCIVHKTGPDSDRWGFTGPDGPVDVRVAGSLH
                     TTSATMVHRAVLAGYGIACLSEPHVLDDIRTGRLCRLLPRWTSDLQQTFVIYLSRRHV
                     PPRTRVLIDFFVAVGRETETQFTNASPSVNDGCVSPASARLAA"
BASE COUNT          635 a         1072 c         1113 g          684 t
ORIGIN      
        1 ccatcgcgta gccgagcggc tggcgcagtc cggacccggt gccggtgccg gtgcccagca
       61 tcagcggcaa gctaccgagc agggcgcaca tcgtcgtcat caggatcggc cggaagcgga
      121 gcttgcaggc ctcattatcg actcctcggc tgtcaggtcg cggctgcgct cggcctccag
      181 cgcgaaattg cgtcgcctcg aaaggggtcc cttttggatg ccgattgaca atctcgacca
      241 gctgatccgc cgccggtacc ccgccttccg accaccagcg gacaccgccg ttgcccccgt
      301 tctgtgatgg gctcaaggca cgacgcatgc tggacaatga acacgtcgga cacccgatat
      361 taaggccgga catgtagccc tggccaccgt gcattttcat caggctgatg tccgtattat
      421 ctgttccgaa tgaagggcaa tcaagaatgt cgaaaacagg ggccgcaaat gtgcgcaaca
      481 actgtcgccc agaacgcaaa ctgcgctcgc gacatggaat ttcctgacaa aaccgaccgg
      541 cgtacggcac tggatcggtc gccggcggtg cccgcgctgg aaaccaggaa cctgtcacgg
      601 gctatctccg gcaaatgtct ggtggacgat atcagcgttc agataccgcc gggcgaggta
      661 ctggccgtgg tcggcccgag tggcgccggt aaatcatctt tcctgcgcct gctgaaccgt
      721 ctggacgagc caaccggcgg tactgtactg ctcaatggca cggactatcg cgagatcgcg
      781 ccacgagagc tgcgccgtcg tgtcggcatg gtcatgcaga cagactacct ctttcccggg
      841 accgtgggga caaatctcgc gttcggaccg cgacaacgcg gcgcaatttt caccgcggag
      901 gagatcgcgg cgctgcttga tcgggtcggc ttgccgggat acagggatcg tgacgtgagc
      961 aatctttcgg gcggcgaggc acaacgggtg tcggtggcgc gcacgctggc gaatgcgcca
     1021 gaggggctgc tgttggacga accgacatcc gcgctcgacg aggcctcagc gcgaggcatc
     1081 gaggaattgc tgctgggtat cattcaggag cggcggatga cctgcgtgat tgtcacgcac
     1141 aacagatccc aggccattcg catcgcgggc cgcacaatgg tcctggaggc tggcaagctg
     1201 gtcacgattg gccccaccaa ggaggtgctg catgcttgct gagttgctga acaacctgag
     1261 tagcaatctt gtcacgggat tggctcaggc ggccggcgcc atgttgctct gcctggtcgt
     1321 ggtgattgca tgccggcgct tcgccgtgca cgtggagcgc gaggccgcgg tatcgatcgc
     1381 tcggggcctt gttcagatgg tgttcgtcgg ggtcgtcctg gctctactgc tgcacggcag
     1441 tttacttatt ggtgtgctca tcctgcttgc gatgaccatc gccgccgcag tgaccgccgc
     1501 acgccgcgcg cggaacgtcg atggggcgat gctgcttgcc ttctgggcga tcgccgccgg
     1561 gtccggtgtc gtgatcgccg gcatgcttgc gaccggcacc ctgcaaacga gcattacgat
     1621 gcttgtgccc gtgggcagca tgatcatcgc caatgccatg aatgcctgcg cccaggccgc
     1681 cgaacgcttc cgggccgatg tcaccgcgca tgtcggccag gtggaggccg gcctggcgct
     1741 cggcggtgac ccggctgtca ccgttgcacc ttacgtgcaa agtgcggtgt acgccagcct
     1801 gctgccccgc ctcgacatgt tgaagtcgct gggcctggtg tggatacccg gggtgatggc
     1861 cggcatgatg gtgtcgggca ccaacccggt ttacgccggc atctaccaat tcatcatcgt
     1921 cgccatgatc ctgagcgcgt ccggtattgc gggactggtc atgacgttgc tgatgcgagc
     1981 acgcgccttc tctcccgccg cacaactgat attgcgttcg cgacagagcg cgcggtgaga
     2041 tcagcgctgg aaagaggctt ggccgatcaa tggaatgcgg acggttttcc atccgttcga
     2101 tggcttcgcc catttataat acgcctgtgc ttcgcctcgg aacatcccac aacctgctcg
     2161 ataatccgca ggacacgtcg gtcaggttga ttgaagcgta tgctgtccgc gagcgtgcta
     2221 ccagcgcggc gcgcgtccat gtcatcgatt ctgtgtgcga agctggtagc acactttgct
     2281 gtggagttcg ttcacgcggc gagtcgggca ctcgccggcg acacacatcc gtcgttgacc
     2341 gagggacttg catttgtgaa ctgcgtttcg gtctcacggc ctactgcaac gaagaagtca
     2401 atcaacacgc gcgtccgtgg cggtacatgg cgtcgtgaca gatatatcac gaaggtctgc
     2461 tgcaggtcgg aagtccaccg cggcagcagc cggcagagcc gacctgtgcg gatgtcgtcc
     2521 agcacgtggg gttccgagag gcaggctata ccgtagccgg ccaataccgc acggtgcacc
     2581 atcgtggcac tggtggtgtg cagggatcct gcgacccgaa catcgaccgg cccgtctggg
     2641 ccagtgaagc cccaccgatc gctgtccggc cccgtcttgt gaacgatgca actgtgctgg
     2701 gcgagttccg tgggatcctg tgggatgccg cgctgttcca gataggccgg agcggccacc
     2761 acagctcggc tgaacgttgc aatcgcgcga gcgacagccg aggcatggtc cgaccgcccg
     2821 ttctgcacca cgaggtcgag gcgctcctcg atcaggtcac caaaccgctc tccaatcacc
     2881 aattcgactg acagtcccgg atagcgtcga agcaatgcgg agaggcgcgc ggtgatcagg
     2941 atggccatcc cgggtggcag gccaacacgt acccggccgg tgggcgaggc tttccgatgc
     3001 ccgagcgtcg cttccatttc ctccgccgcc tccaacatac tgcgagcctg ggcaagcagg
     3061 ctttcaccat catcggtcag gctgaggtgt cgtgtcgtgc ggtggaacag gcggatcccg
     3121 aagtggtcct ccaactgtcc gatcagccgc gtgacgcttg aatggttgct attcgtttcg
     3181 cgggcgacgg cagagaacga gccggtctcg accactcgca cgaatgttcc gaggccgtgg
     3241 agtaggtcca tgaatggatt ccttcgatag ccggcagttc ataacgctca gctctggttg
     3301 cggcacgggg acggccagcc gcggtaggtc atggctaatc tgcgtgtccc gtacattgcc
     3361 caggccatca ccgtaaccat ctcagggaat cggaccatcg gcatctgccg agatgagcct
     3421 gatgcttagt taaggcgtcc tggatcaact gctcgccaac catatggcgt gaggccaggc
     3481 agagaggact gaattccgtt cgtc
//
LOCUS       DATAVD010001261         7797 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2541925, whole genome shotgun sequence.
ACCESSION   DATAVD010001261 DATAVD010000000
VERSION     DATAVD010001261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7797
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2541925"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..576)
                     /locus_tag="VHX39_24015"
     CDS             complement(<1..576)
                     /locus_tag="VHX39_24015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994249.1"
                     /translation="MRSLNNASITVKSLMSTLVGAVVLIAMALLTMTSLLEFQRANDL
                     QNATTLAMSQTRDSWIDLSRGQAALYRAINLKSQNVEIGTIRAAKNEFTQASTHAKHG
                     LDSLKLTTVAIDPALATKAAQTVEQYLSASNQAASFVEEDAFNATMFMTDSEQKYDAA
                     QQAVAALLKGAIAADDAIDQQMDAMVHARLMT"
     gene            complement(670..1116)
                     /locus_tag="VHX39_24020"
     CDS             complement(670..1116)
                     /locus_tag="VHX39_24020"
                     /inference="COORDINATES: protein motif:HMM:NF028509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HEX3994250.1"
                     /translation="MRLLTLLIMPVWLLLAPAAFAEGQATPDDAKALAIKAAEYLKAV
                     GPEKALPEFSAKDGPWHDRELYVVVQDSRGVIVAHGTNPGLIGRMVLGLKDVDGKPFN
                     QEVQAVKDVGWVTYKWQNPITKAVENKTQYTIRVGEYVVGVGAYAK"
     gene            complement(1298..2281)
                     /gene="cysK"
                     /locus_tag="VHX39_24025"
     CDS             complement(1298..2281)
                     /gene="cysK"
                     /locus_tag="VHX39_24025"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014414056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEX3994251.1"
                     /translation="MPATRKPITLDRPLRGRIYDSIAETIGNTPLVRIPNITAEDGIK
                     ADICLKLEFFNPISSVKDRIGVNMILAAEADGRLKPGGTIIEPTSGNTGIGLAFVAAS
                     RGYRLILTMPDSMSIERRKMLGYLGAELVLTPRADGVRGAIAKAKELQAATPGSIIAG
                     QFENPANPEIHRRTTAEEIWYDTRGQVDAVVSGIGTGGTLMGCSQTLKPRRPGLKMVA
                     VEPSASPVLSGGKPGPQPIQGIGAGFIPDIVDVSAFDEIITVENEEAFANARRLAKTE
                     GIPAGISSGAALAATLKLAARPEMAGKLIVTIIPSFAERYITTALFEGIGD"
     gene            2531..3061
                     /locus_tag="VHX39_24030"
     CDS             2531..3061
                     /locus_tag="VHX39_24030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEX3994252.1"
                     /translation="MHQLLLLRHAKSSWNDAVLPDRDRPLNKRGRRSAVAIRHAMREF
                     GLLPDLILVSTAKRTLETMDALEPWDDTPLVEPMDDLYLASDARLLAILRGVAETVRT
                     VLLIGHNPGMHNLTVLLADPHASAEQPLSAVREGFPTGALAELTVTGPWSRLGRGGGR
                     LMRFLTPRMLDAADHG"
     gene            3061..4566
                     /locus_tag="VHX39_24035"
     CDS             3061..4566
                     /locus_tag="VHX39_24035"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HEX3994253.1"
                     /translation="MELTLLLAPADAVRLQRSPTIKAARSGRARSQAVQIVWHDSLDR
                     GLASQGLALTAQRGIWRLEQHRPGAAEPWPPATDHRLIVEANGLEPLRHALAEADAET
                     AGRDLPDAITPVAAFAGRRTVFPLVIDGETVSMTLLDGVLRAVAAEQPATRLILEGPG
                     PQVRTLVLALAETLAITVPQHCLWAEALKLADGIAQEPRRRGAPDLPAEGMSIQDAFA
                     HIVGHLTDVTLDLAPMVADIEHGTEPVHQMRVAVRRARSAFALFPALPDNPAHASAAE
                     GLKRLGRMLGPARDWDVFMTETAPPVEAALPEQPALHSLLRAGARRRNAARASLVAYL
                     HSPEFHKLCLELACLAAADPPVDQAPADQEAADPENVPPLSEFAAAVLRRRWKKLLNA
                     GRALDDLDIEALHDLRLKAKRLRYAAEFFAPLFPEKPTSRFIRRLAVLQDRLGLFNDT
                     TVAEGLLRDLNSNPGYAAGLVLGFTASRGAHSRRQISAAWARFRRRDPFWD"
     gene            4836..5894
                     /gene="pdhA"
                     /locus_tag="VHX39_24040"
     CDS             4836..5894
                     /gene="pdhA"
                     /locus_tag="VHX39_24040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HEX3994254.1"
                     /translation="MAQAAETRKSEKSPGKASTKATGKGSAKQTDPTADRAQLLQAYR
                     TMLLIRRFEEKAGQLYGMQLIGGFCHLYIGQEAVVTGMQMAIGDGDEVITSYRDHGHM
                     LAAGMEARGVMAELTGRAGGYSHGKGGSMHMFSKEKNFFGGHGIVGAQVSLGNGLAFS
                     NWYRENDRVCLTYFGEGASNQGQVYESFNLAALFKLPVVFVIENNKYGMGTSVERASA
                     SHDLSKNGVPWGITGAQIDGMDVLAVKAAAEVAVAACRAGKGPYLLEAKTYRYRGHSM
                     SDPARYRPREELQLMRSQHDCIDHARQLLTTLGVDDKQIKDIDDEVKAIIQDAADYAQ
                     ASPEPDPAELWTDILLEG"
     gene            5898..7268
                     /locus_tag="VHX39_24045"
     CDS             5898..7268
                     /locus_tag="VHX39_24045"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010514246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex E1 component
                     subunit beta"
                     /protein_id="HEX3994255.1"
                     /translation="MATQILMPALSPTMTEGKLARWLKHVGDDVRAGEVIAEIETDKA
                     TMEVEAVDEGKLAQILVDEGTEGVPVNTPIAVLSMNGEAVAMAPPATAPPKAAEAPAA
                     VPPKAADAPAAVHAVAPQAVAAAPEKDWGPTAAITVREALRDAMAAEMRADKDVFLIG
                     EEVAQYQGAYKISQGLLDEFGPRRVIDTPITEHGFTGMAVGAALNGLRPIVEFMTFNF
                     AMQAMDQIINSAAKTLYMSGGQMGCPIVFRGPNGAAARVGAQHSQCYASWYAHVPGLK
                     VVSPWSAADAKGLLRAAIRDPNPVIVLENEILYGQTFDCPTDPDFVLPIGRAKVERTG
                     THVSIVAFGIMVGVALKAAEALAADGIEAEVINLRSLRPLDSETVVASVKKTNRLVTV
                     EEGWPFAGIGAEVTMQIIEQAFDWLDAPPVRVHGADVPLPYAANLEKLALPQPDWVVD
                     AVRKLI"
     gene            7284..>7797
                     /locus_tag="VHX39_24050"
     CDS             7284..>7797
                     /locus_tag="VHX39_24050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEX3994256.1"
                     /translation="MATNILMPALSPTMTEGTLSRWLKKEGEAIKAGDVIAEIETDKA
                     TMEVEAVDEGVLGRILVQDGTEGVKVNEPIAVLVGAGEAVPAAPAPAAKAAPTPAPAK
                     ADTPAIVPTPAAQPAPAPAAAPAPAPAANGHARNGERIFASPLARRMAAQSGIDLSGL
                     KGSGPNGRIVR"
BASE COUNT         1446 a         2456 c         2502 g         1393 t
ORIGIN      
        1 cgtcatcagg cgcgcatgca ccattgcgtc catctgctga tcaatcgcgt cgtctgcagc
       61 gatcgccccc ttgaggagtg cggcgacagc ctgctgtgcc gcatcatatt tctgctcgct
      121 gtcggtcatg aacatcgtgg cgttgaacgc atcctcctcc acgaatgacg cagcctggtt
      181 ggacgcgctc aggtattgct caaccgtttg tgccgccttg gtcgccaggg ccggatcgat
      241 ggcgacggtg gttagtttca acgaatccaa accatgcttt gcgtgagtac tcgcctgggt
      301 gaattcgttt ttcgccgctc ggatcgtccc gatttcgacg ttttgcgatt tcagattgat
      361 tgcccggtac agcgccgcct ggccgcgcga caaatcgatc caggaatcgc gcgtctggct
      421 catcgccagt gtggtggcat tttgcaggtc gttcgcacgc tggaattcga gcagactcgt
      481 catggtgagc aaggccatgg cgatcagcac cactgcgccg accaacgtcg acatcagcga
      541 tttcaccgtg atcgaggcgt tgttaagcga tcgcatggtc aggttccgtt catgctgcga
      601 cgacccactc gttgccgcga acgagtggcc gaattatccg acaaacgcac ctggttccgg
      661 cacggtgggt catttggcgt acgcaccgac accaaccacg tactcgccga cgcgaatggt
      721 atattgcgtc ttgttttcga ccgctttggt aatcgggttc tgccacttgt aggtgaccca
      781 gccgacgtcc ttgacggcct ggacctcctg attgaatggc ttgccgtcga catccttgag
      841 ccccagcacc atgcggccga tcaatcccgg attggtaccg tgcgcaacga tgacgcccct
      901 ggagtcctgc accaccacgt aaagctcgcg atcgtgccag ggtccgtcct tggcgctgaa
      961 ttccgggaga gccttctctg gaccgacagc cttcaggtat tcggcggctt tgattgccaa
     1021 tgccttggcg tcatccggtg tcgcctggcc ctcggcaaac gccgccggcg ccagcagcaa
     1081 ccagacaggc atgatcagca gggttaacag cctcatgatg atgacctcgg tcaattgtct
     1141 gacgcagggt catagaacca ggagtttaat gaacggttaa tcgtggcgac gctgcattgg
     1201 cgcccatccc gggcggcggc ccaaccggcg cgccgcggcg tgcgtgcggc attgaacgat
     1261 gccgcacgca cgggccgaaa cgttacgcgg cagttggtta gtcgccaatc ccctcgaaca
     1321 acgcggtggt gatataccgc tcggcgaacg atggaatgat cgtaacgatc agcttgcccg
     1381 ccatctccgg ccgcgcggcc agtttcaatg tcgccgccag cgccgcgccc gaggaaatgc
     1441 ccgcagggat cccctccgtc tttgccagac ggcgtgcatt ggcgaacgct tcctcgttct
     1501 cgaccgtaat gatttcatcg aacgccgaca catcgacgat gtccgggatg aagcccgcac
     1561 cgatgccctg gatcggctgc ggcccaggtt tgccgccgga caacaccgga cttgccgatg
     1621 gctcaaccgc gaccattttc aaccccggcc gcctgggctt caatgtctgc gagcaaccca
     1681 tcagcgtgcc gccggtgcca atgccggaaa cgacggcgtc cacctgcccg cgcgtgtcgt
     1741 accagatttc ttcagcggtg gttcgccggt ggatctccgg attggccgga ttttcgaact
     1801 ggcccgcaat gatcgatccc ggggtcgccg cctgcaattc cttggccttg gcgatcgccc
     1861 cgcgcacccc gtccgcgcgc ggcgtcagca ccagctcagc gccgagatag cccagcatct
     1921 tgcgccgttc gatcgacatg gaatccggca tcgtcaggat cagccgatac ccgcgggaag
     1981 cggccacgaa agccagaccg atgccggtgt tgcctgacgt gggctcaata atcgtaccgc
     2041 caggtttcag acgaccgtcg gcctcggccg ccaaaatcat gttaacgccg atacggtcct
     2101 tcacgctgga gatgggattg aagaactcca gcttcaggca gatgtcggcc tttatgccat
     2161 cctcggcggt gatgttcggg atgcggacca gcggcgtatt gccgattgtc tccgcgatgc
     2221 tgtcgtagat cctgccgcgc aatgggcggt cgagggtgat cggcttgcgg gttgccggca
     2281 tggggttgcc tcctgcgttt tggtgatccg ttcggcatac acagaccgat tttccgccgc
     2341 gaagcaaggc gtggccgctc gacaaacgga gtttctccaa aacacctgta tcggtgaaat
     2401 ctgctcgcat tgcagcgggc gtctgggcca gaactcccta caactccggt tggccccaac
     2461 cacgccacgg ctgatctgct gccacagggt cgagacaaaa ctgccgcgtc gtggcactat
     2521 caccggtacg atgcaccagc ttctgctcct ccggcatgcg aaatcgtcct ggaacgatgc
     2581 cgtcctgccc gaccgtgacc gcccgctgaa caagcgaggc cggcgcagcg ctgttgccat
     2641 ccgccacgcc atgcgggaat tcggcctgct cccggacctt attctggtgt ccactgccaa
     2701 acgcacgttg gaaaccatgg acgcgctgga accctgggac gatacgccgt tggtcgaacc
     2761 gatggacgac ctgtatctcg ccagtgacgc acggctgctc gcaattttgc ggggggtggc
     2821 tgaaacggtg cgtaccgttc tcctgatcgg gcataatccg ggcatgcata acctcaccgt
     2881 tctgctggcc gatccgcacg catcggccga acagccgctg agtgcggtcc gcgaggggtt
     2941 ccccacgggc gcgctggcgg aattgaccgt aaccggtccg tggtcccggc ttggccgcgg
     3001 cggcgggcgg ctgatgcgct tcctcacccc acgcatgttg gacgcggcgg accacggata
     3061 atggagctaa cactgctgtt ggctccggct gacgccgtgc ggttgcagcg gtcgccgacc
     3121 atcaaagcgg cgcgcagcgg gcgggcgcgc agccaggcgg tgcaaatcgt ctggcatgac
     3181 tcgctcgacc gggggctggc gtcacagggt ctggcgctga ccgcacagcg cggcatttgg
     3241 cggttggagc agcatcgacc tggcgccgcc gagccatggc cgcccgcaac cgaccaccgg
     3301 ctgatcgtcg aggccaatgg gctggagccg ctgcgccacg ctctggcgga ggccgacgcc
     3361 gagacggcgg gccgcgacct gcccgacgcg atcacgcctg tcgcggcgtt cgccggccgg
     3421 aggacggtat ttccgctggt catcgatggt gagaccgtct cgatgacctt gttggatggc
     3481 gtcctgcgcg cggtcgcggc cgagcaaccg gcgacccggc tgatcctcga aggccccggc
     3541 ccgcaggtgc gaacactggt cctggcgttg gccgagacgc tcgcaatcac cgtgccgcaa
     3601 cactgtctct gggccgaggc gctgaaactc gccgacggca tcgcccagga accgcgacgg
     3661 cgcggcgcgc cggacttgcc ggccgaaggg atgtcgatcc aggacgcgtt cgcgcatatc
     3721 gtcggacatt tgaccgatgt cacgttggat ctggcaccaa tggtcgcgga tatcgaacac
     3781 ggcactgaac cggtgcacca gatgcgcgtg gcggtgcgcc gcgcccgctc ggcgttcgcg
     3841 ctgtttcccg ctctgccgga caaccctgcg catgccagcg ccgctgaagg cctgaaacgt
     3901 ctgggccgca tgctcgggcc ggcgcgcgac tgggacgtgt tcatgaccga gacagcgcct
     3961 ccggtcgagg ctgccctccc cgagcagccc gcgctgcaca gcctgttgcg tgcgggggcg
     4021 cgacggcgca atgccgcccg tgcgagcctg gtcgcatatt tgcacagtcc cgaatttcac
     4081 aagctctgtc tggaactggc ctgtcttgcc gccgcggatc caccggtgga tcaggcgcca
     4141 gccgatcagg aggcagcgga tccggaaaac gtcccgccgc tgagcgaatt cgccgccgcc
     4201 gtgctgcgac ggcgctggaa gaagctgttg aacgccggac gggcgctgga cgatctggac
     4261 atcgaggcgc tgcatgatct gcggctgaag gccaagcgcc tgcgttacgc cgccgagttt
     4321 ttcgcgccgc tgtttccgga aaagccaacc tcccgcttca tacgccggct ggccgtgctg
     4381 caggaccgtc tgggcttgtt caacgacacc acggtggccg agggattgct gcgtgacctg
     4441 aacagcaatc cgggctacgc cgccggcctt gtgcttggct tcaccgcctc ccgcggggcc
     4501 cattcccgcc gccagatctc cgccgcctgg gcacgcttcc gccgccgcga cccgttttgg
     4561 gattgaagca ttggtccgtc cggacggacc gtaaggacgc tgcgaaatcc aggcgccgca
     4621 cgaaataata ttgcgcaaga acgcttctgt cagcaatccg aagcggcccg gaattaccgg
     4681 tccacgcgtc atgtcacaca gttaaccaga aaccggttaa cgaccgatat tgcgttgcat
     4741 caccaaggat ttcacaggtc tgacgcttgc cgcgacggtc ggcccgccct tagatggcag
     4801 ggaaactccg acgaacggat gcggggatcg aaataatggc acaagcggcg gaaaccagga
     4861 aatccgagaa gagccccggc aaggcgtcca caaaggccac ggggaaggga tcggcgaagc
     4921 agaccgatcc cacggccgat cgcgcccaat tgctgcaggc gtaccggacc atgctgttga
     4981 tccggcggtt cgaggaaaag gctggccagc tttatggcat gcagctgatc ggcggcttct
     5041 gccatctgta tattggccag gaagctgtcg tgaccggcat gcagatggca atcggcgacg
     5101 gcgacgaggt catcacctca taccgcgacc acggccacat gctggcagcc ggcatggagg
     5161 ctcgcggtgt gatggcggaa ttgaccggcc gagccggggg ctattcgcat ggcaagggcg
     5221 gctccatgca tatgttcagc aaagagaaaa atttcttcgg cggacatggc atcgtcggcg
     5281 cgcaggtttc actgggcaat ggactggcat tctccaactg gtatcgcgag aacgaccgcg
     5341 tctgcctgac ctatttcggc gagggtgcgt cgaaccaggg ccaggtctac gaaagcttca
     5401 atctcgccgc gctgtttaag ttgcctgtcg tgttcgtcat cgaaaacaat aaatacggta
     5461 tgggaacgag tgtcgagcgc gcctcggctt cgcatgacct gtcgaagaac ggcgtgccct
     5521 ggggcatcac cggagcgcaa atcgacggca tggatgtgct ggcggtgaaa gcggctgccg
     5581 aggtcgcggt ggcggcctgt cgcgccggca agggaccgta tttgctggag gcgaagacct
     5641 atcgctaccg cggccattcg atgtccgatc cggcccgcta ccggccacgc gaggaactgc
     5701 aattgatgcg ctcgcaacac gattgcatcg accatgcgcg ccagcttctg acgacgctcg
     5761 gcgttgacga caagcaaatc aaagatatcg acgacgaggt gaaagccatc atccaggatg
     5821 cggcagatta cgcgcaggcc agccccgaac ccgatccggc cgagctgtgg accgacatac
     5881 tgttggaggg ttgagcgatg gcaacacaaa tcctgatgcc ggcgctgagc ccgaccatga
     5941 ccgagggcaa gctcgcccgc tggttgaagc atgtcggcga cgatgtgcgc gccggtgagg
     6001 tgattgcgga aattgaaacc gataaagcaa cgatggaagt cgaggccgtc gacgagggca
     6061 agctcgcgca gatcctggtt gatgaaggca ctgaaggtgt gccggtgaac acgcccatcg
     6121 ccgtactgtc gatgaacggt gaggcggtgg caatggcgcc gccggccact gcgcctccca
     6181 aggcggcgga ggccccggct gcggtgccgc caaaggccgc ggacgcgccg gccgcagtgc
     6241 atgcggtcgc gccgcaagct gtggccgctg cgccggagaa agactgggga ccgaccgcgg
     6301 cgatcaccgt ccgcgaagcc ttgcgcgatg ccatggcggc cgagatgcgc gccgacaagg
     6361 acgtctttct gatcggcgag gaagtcgcgc aatatcaagg cgcctacaaa atcagccagg
     6421 gcctgctgga tgaattcgga ccgcgccggg tcatcgatac accgatcacc gagcacgggt
     6481 tcaccggcat ggcagtcggc gccgccctga acgggctgcg gccgatcgtc gagttcatga
     6541 ccttcaactt cgccatgcag gcgatggatc agatcatcaa ttctgccgcg aaaaccttgt
     6601 acatgtcggg cggccagatg ggttgtccca ttgtgttccg cgggcccaac ggtgcggcgg
     6661 cgcgggtcgg cgcgcagcac tcccaatgct atgccagttg gtacgcccat gtgccgggcc
     6721 tgaaagtcgt ctcgccctgg tcggccgcgg atgccaaggg attattgcgg gcagcaatcc
     6781 gcgatcccaa tccggtgatc gtcctggaga acgaaattct ctatggccag acgttcgatt
     6841 gtccgaccga tccggatttc gtgctgccga tcgggcgtgc gaaagtcgag cgaaccggca
     6901 cgcacgtcag catcgtcgcg ttcggcatca tggtcggcgt ggcattgaaa gcggcagaag
     6961 ccctggcggc ggatggcatc gaggcagagg tgatcaacct ccggtcgctg cgtccgctgg
     7021 acagtgaaac cgttgtcgcc agcgtcaaaa aaaccaaccg gctggtaacg gtcgaggaag
     7081 gttggccgtt cgccggcatc ggcgccgaag tcaccatgca gataatcgag caggcgttcg
     7141 actggctcga tgcgccgccg gttcgggtgc atggcgccga tgtgccgctg ccctatgccg
     7201 ccaatctgga aaagctcgcg ttgccgcaac cggactgggt tgtcgacgca gtgcgcaaac
     7261 tgatctgagc ggggggacgc ggaatggcca caaatattct gatgccggcg ctcagtccga
     7321 ccatgaccga gggcacgctg tcgcgctggc tcaaaaagga aggcgaagcg atcaaggccg
     7381 gcgacgtgat tgccgagatt gaaaccgaca aagcgacgat ggaggttgag gcagtcgatg
     7441 aaggcgtgct tggccgcatc ctcgtgcagg acggcaccga gggcgtgaag gtcaacgaac
     7501 cgatcgcggt gttggtcggc gccggcgagg cagtgccggc cgcacccgcg ccagcggcga
     7561 aggcggcacc aacgcctgcg ccggcgaagg cggacacgcc ggccatcgtg cccacgccgg
     7621 cggcgcagcc tgcgcccgca ccggctgctg caccggcacc ggcaccggca gccaacggtc
     7681 acgcgagaaa tggcgaaaga atcttcgcgt caccgctggc gcggcggatg gcagcccagt
     7741 cggggatcga tctttcgggt ttgaagggca gcggtccgaa tgggcgcatt gtgcgag
//
LOCUS       DATAVD010001262         2767 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_492034, whole genome shotgun sequence.
ACCESSION   DATAVD010001262 DATAVD010000000
VERSION     DATAVD010001262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2767
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_492034"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..272)
                     /locus_tag="VHX39_24055"
     CDS             complement(<1..272)
                     /locus_tag="VHX39_24055"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3994257.1"
                     /translation="MEYVAAIGVLIAIYIILSSSYDLVIGYGGLSTVAHPIFFAVGAY
                     TSGLLAIHSNLPPPVNVVLGGAAAVVASVLLAASALRVSGDYLLIA"
     gene            complement(275..1174)
                     /locus_tag="VHX39_24060"
     CDS             complement(275..1174)
                     /locus_tag="VHX39_24060"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3994258.1"
                     /translation="MLDPVILAQILWTGIATSAPYVLLTAGFSLTLKVTGLWNFAHAG
                     LMAIAFYAMFFVVNGLGLPVAVALALAVAVTGLASLMIEILGLQVLRDRGSGNLTFFI
                     FTLILSEFVIYVITLLFGTEPETLFKSILSPVRIIGNIAVSDWDTLAISVAACGLALL
                     YAFLTWTREGQFLGAVADNARLAELYGISARRARRVVSVIAALFIVAAMYLIGTHGGV
                     VPNSPLELILTAVIGTLLGGIGRVFAGAAASVFLGLIQSFSILVIGSRWQNLLLYGVL
                     FAAILLFPRGVRLPRLRPMLARR"
     gene            complement(1185..2336)
                     /locus_tag="VHX39_24065"
     CDS             complement(1185..2336)
                     /locus_tag="VHX39_24065"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3994259.1"
                     /translation="MLFTTRRKILGTAALTGLSLPSIVRAQGKEPIKLGSALPLTGSQ
                     AGYGKDFDTSMRMAAKDVNDAGGIAGRMVEIVALDTQAEAQLGINAVNRFIDVEKMPM
                     FLVSWSAVVKAVAPIANREKVLAINDGANAPEIAHLGDYVYTAFPLADVDVTALAKYV
                     YTTLGKRRAAVLYINNDTGIDAAKIYRDTFTQAGGEVVAFEAYDPKATEFTGMLLKTR
                     AANPDTVHIHGLTADTPQVIAQMRQLGMTQRISSYSAAYNPKILEQLGPAAEGLIVTS
                     LAPGVKDNKNVQKLLDRWKAEQNRVPNGLPYDQYQYDMVWLTKALYEYLDKKSVPATG
                     DSLKEALLTIKEFDLPMTGKMIFDGHRVNKPVYLLTVDKGAFVPLATLT"
     gene            complement(2463..2717)
                     /locus_tag="VHX39_24070"
     CDS             complement(2463..2717)
                     /locus_tag="VHX39_24070"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEX3994260.1"
                     /translation="MTAGLGNRTVLILAMGVGAFIPPIGVGFYVSAAVASAELEPAAK
                     AMIPYAIVLILAVLLIALVPELVLQHLSEAHGQGVARSGS"
BASE COUNT          606 a          839 c          818 g          504 t
ORIGIN      
        1 ctcgcgatca gcagataatc tccggagacg cgcagcgcgg aggccgcgag cagcaccgac
       61 gcgaccactg ctgccgcgcc gcccagtacg acattgacgg gcggcggaag attggaatga
      121 atcgccaaca atccggacgt gtatgcgcca acagcgaaaa agatcggatg tgcgacggtg
      181 gacaggccgc catagccgat cacaagatcg tagctggaac tcaaaatgat gtagatcgca
      241 atcagcacgc cgatcgctgc cacgtattcc acagctatct cctggccagc atcgggcgaa
      301 gccgcggcag gcgcacgccg cgtgggaaca gcagaatggc ggcgaacaaa acgccgtaca
      361 gcagcagatt ctgccaacgc gagccgatga caaggatgga aaagctctgg atcaggccaa
      421 gaaagaccga agccgccgcg cccgcgaata cccggccgat gccgcccaat aaggtaccaa
      481 taacggcggt caggatgagt tcgagcggtg aattcggcac gacgccgccg tgcgtgccga
      541 tcaaatacat cgccgcgacg atgaacaatg ccgcgattac cgatacgacg cgcctggccc
      601 ggcgggcact gatgccgtac aattccgcca ggcgtgcgtt gtccgcgaca gcgccaagga
      661 actggccttc gcgggtccac gtcagaaacg cgtagagcaa ggccaacccg caggctgcga
      721 ccgagatcgc cagagtgtcc cagtcgctga cggcgatatt gccgatgatc ctgaccggcg
      781 agaggatact tttgaacagc gtctccggtt cggtgccaaa cagcaatgtg attacgtaaa
      841 tgacgaactc ggacaagatc agggtgaaaa tgaagaacgt cagattgccg gagccccgat
      901 cacgcaacac ctgaaggccg agtatctcga tcatcaggga ggcaagcccg gtcacggcga
      961 cggcgagggc aagtgcgacc gcgaccggca ggccaagacc attgacgacg aaaaacatcg
     1021 cgtagaatgc gattgccatc agaccggcat gcgcgaaatt ccacagtccg gtgactttaa
     1081 gcgtcaacga aaagccggcc gtcagcagca catagggtgc ggatgtcgct atccctgtcc
     1141 aaaggatttg cgccaggata accggatcaa gcacgtcgga agcctcaggt cagtgtcgcc
     1201 aggggaacga acgcgccttt atcgaccgtc agcagataca ccggcttgtt cacgcggtgt
     1261 ccgtcgaaga tcattttgcc ggtcatcggc aggtcgaact ccttgatcgt cagcagcgct
     1321 tccttcagtg aatcacccgt tgccggcacc gactttttat cgagatattc gtagagtgcc
     1381 ttggtcagcc agaccatatc gtactggtac tggtcgtagg gcaggccatt cggcacacga
     1441 ttctgctcgg ccttccagcg atcgagcagc ttttgcacat tcttgttgtc cttcacgccg
     1501 ggcgccagcg atgtcacgat cagcccttcc gccgccggcc caagctgctc gagaatcttc
     1561 gggttatatg ccgctgaata actgctgatc cgctgagtca tcccgagttg ccgcatttgt
     1621 gcgatgacct ggggtgtatc ggcggtcagg ccatggatgt gcaccgtgtc cgggtttgcc
     1681 gcccgcgtct tcagcaacat cccggtgaac tcagtggctt tcggatcgta ggcctcaaat
     1741 gccacgacct cgccccctgc ctgcgtgaag gtgtcgcgat agattttcgc tgcgtcgatg
     1801 ccggtgtcgt tgttgatgta cagcaccgcg gcgcgccgct tgcccaatgt ggtgtagacg
     1861 tatttcgcca gcgcagtgac atcgacgtcg gccagcggaa acgcggtgta gacgtaatcg
     1921 ccgaggtgag cgatctcggg cgcgttggcg ccgtcattga tggcaagcac cttctcccga
     1981 ttcgcgatcg gcgccacggc ctttaccaca gcagaccacg acaccaggaa cattggcatt
     2041 ttctcgacgt cgatgaagcg gttgacggcg ttgatgccaa gctgcgcttc cgcctgcgtg
     2101 tcgagcgcga cgatctccac catccgtccc gcgatgccgc cggcatcgtt cacgtccttc
     2161 gccgccatgc gcatgctggt atcgaagtcc ttgccatagc cggcctgtga tccggtcaat
     2221 ggcaaggcgc tgccgagttt gatcggctcc ttgccctgcg cgcggacaat tgacggcaga
     2281 ctgaggccgg tcagcgcggc tgtgccaagt atcttgcggc gagtcgtgaa cagcatgacg
     2341 tctccttcgt cccaatgtca ggcaattgcg ccttttcgag ccgggttatc ccatcattcc
     2401 ggcagcgatg ccaccggcct ggttggctgc aacaacggtc actgcggaaa acgtatcgcg
     2461 ggtcaggatc cggatcgagc aacaccctgg ccatgtgctt ccgacagatg ctgcagcacc
     2521 agctccggaa ccaacgcgat cagcagcacg gcgagaatca ggacgatcgc atacgggatc
     2581 atggctttcg cagcgggctc gagttctgcg ctcgcaaccg cggccgaaac gtagaatccg
     2641 acgccaatgg ggggaatgaa agcaccaacc cccatggcga ggatcaatac agtgcggttg
     2701 cccaaacccg ccgtcaatca gacctggcgg agcagcccga tacgttgatg gttacgtacc
     2761 agcaagt
//
LOCUS       DATAVD010001263         2360 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2542046, whole genome shotgun sequence.
ACCESSION   DATAVD010001263 DATAVD010000000
VERSION     DATAVD010001263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2360
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2542046"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..314)
                     /locus_tag="VHX39_24075"
     CDS             complement(<1..314)
                     /locus_tag="VHX39_24075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994261.1"
                     /translation="MILNTTATMKHWRERIGSYLFAGGHFLDPRRDELIDGIEVLVED
                     NLIKEVSDRPISADGAQRIDAHIHLVLTEVDLQMLVDVPLTLQAAKGSVAMRAMLERG
                     FTT"
     gene            447..1115
                     /gene="parA"
                     /locus_tag="VHX39_24080"
     CDS             447..1115
                     /gene="parA"
                     /locus_tag="VHX39_24080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008166580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family partition ATPase"
                     /protein_id="HEX3994262.1"
                     /translation="MFGWTQKGSVVIIAVVNQKGGAGKTTIAVNLSAALAAEGKRILL
                     VDADPQQTAQDWAAVRNSASSFRVVGLAKPVLHRAVPRLVADYDFEYVVIDGAPRNYE
                     VTRSAIEAADLVLIPVQPSGADFWASRETVNLTKETQASKPTQKSMFVISRKIDRTVL
                     GRDIANALAEFGLPILRAATTQRVIYAESLTAGSTVIEQQPQGPAAREICAILSELRG
                     TVAA"
     gene            1112..1681
                     /locus_tag="VHX39_24085"
     CDS             1112..1681
                     /locus_tag="VHX39_24085"
                     /inference="COORDINATES: protein motif:HMM:NF020918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HEX3994263.1"
                     /translation="MNKPRFQLPPRADVSFGMDRWAMVEAASRRSDAKLDFASRKPPE
                     LAALIDFPFMFDLTALFAAHWRNMEAISTANRIVSEGAQEVALRNLEIMRQTIDAFSE
                     RVQTVGTAECPADRAMRQTETAIKTYEVATANLRELGDIIQQANTEAMEVLGRRCTEV
                     ANEMKSLARYVTRSFWDVEARPAPFGEHP"
     gene            complement(1786..>2360)
                     /locus_tag="VHX39_24090"
     CDS             complement(1786..>2360)
                     /locus_tag="VHX39_24090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994264.1"
                     /translation="RLLAAACLDPQRDGFQIGPVPAAIGSSVNFGLTAAQALEDRAID
                     GFWANGMAAELAISGGYGSLVLDVRRGDGPVGCFDYTMGVLATTERLIEQSPDIAAAA
                     VRALVAAQNALRADPSRATAAATRRFPPRETGLIARIVERDLPFYNATISEPSVTAIN
                     DFARWLGILNDDVPWSDVVATQLSRFWHGT"
BASE COUNT          493 a          681 c          714 g          472 t
ORIGIN      
        1 gtggtgaagc cgcgctccag catcgcacgc atggcgaccg agccttttgc tgcctgcaag
       61 gtcaacggga catcgaccaa catttgaagg tctacctcgg tcagcacgag gtggatgtgc
      121 gcgtcgatcc gctgcgcgcc gtcggcggaa atcggacggt cggagacctc cttgatcaga
      181 ttgtcctcga ccaaaacctc aatgccatcg atcaactcgt cgcgccgcgg gtcgaggaag
      241 tgtccgcctg cgaacagata cgacccaatg cgctcccgcc aatgcttcat cgtcgccgtg
      301 gtgttcagta tcaacgttgt gaccggaaga cgcaaaacga aggcggatcg gattgaccca
      361 ggcggccaac gttgtacgaa cgaatcccgg cgtccggtca cgcctgtcaa taggtgcgaa
      421 tcgaattcct gtgccagtga gtaccagtgt tcgggtggac acagaagggt tcggtcgtga
      481 tcattgcagt ggtcaaccaa aagggagggg cgggaaagac gacgatcgcc gtcaacctgt
      541 ccgcagcatt ggctgccgaa ggaaagcgta ttcttttggt cgacgccgac ccccagcaga
      601 ccgcccagga ctgggctgcg gttcgcaata gcgcgtcgtc attccgcgtt gttggcctgg
      661 cgaagcccgt gctgcaccgg gcagttcctc gattggtcgc cgattatgat tttgaatacg
      721 tcgttattga cggcgcccct cgtaattatg aggttacgcg gtcggcgatc gaagcggccg
      781 atctggtgtt gattccggtg caaccgtcgg gggcggattt ctgggccagc cgggaaaccg
      841 tcaacctgac gaaagaaacg caggcatcga agccaaccca aaaatccatg tttgtgattt
      901 ctcgcaagat cgaccgcacg gttcttggcc gcgatatcgc gaacgctctc gccgaattcg
      961 ggcttcccat cctgcgtgcg gcgacgacgc aacgtgtcat ctatgcggaa tccctcacag
     1021 cgggctcaac cgtgatcgag caacagccgc agggtcccgc ggcccgcgaa atctgtgcca
     1081 tcctgtccga actccggggg acagttgccg catgaacaag ccccgcttcc agttacctcc
     1141 acgcgctgac gtctcatttg gtatggaccg ttgggcgatg gtcgaagcgg catctcggcg
     1201 gagtgatgcg aagttggatt ttgcctcgcg taaaccgcct gaactggcgg cgttgatcga
     1261 cttccccttc atgtttgatt tgacggcatt gtttgcagcg cattggcgca acatggaagc
     1321 aatcagcaca gccaacagga ttgtgtcgga aggcgcccag gaagtggcac tgcgcaatct
     1381 cgagattatg cgacagacga tcgatgcctt ttcggagcgc gttcagaccg taggaaccgc
     1441 tgagtgtccg gcggatcggg caatgcggca aaccgaaaca gccattaaga catatgaagt
     1501 tgcgacggcc aatctgcggg agctaggaga cataatccag caggcgaaca ctgaagcgat
     1561 ggaggtactg ggtaggcgct gcaccgaagt cgcgaatgag atgaaatctt tggccagata
     1621 cgttacccgc agtttctggg acgtcgaggc gaggccggca ccgtttgggg aacacccctg
     1681 acaatcactg atcttcggct tcggcgtttg gcttggcgga aggatcgtgt ttcgcatcgt
     1741 gcaacatcag cccggatgct ttgacccact gtccgtcagg ctgcgttagg tgccgtgcca
     1801 aaatcgggaa agctgcgtcg ccacgacgtc ggaccatggc acgtcatcgt tgagaatgcc
     1861 gagccaacgg gcgaaatcat tgattgcggt gaccgacggt tcactgatcg tggcgttata
     1921 aaacggcagg tctcgctcga cgatacgcgc aatcagcccg gtttcacgtg gaggaaatct
     1981 tcttgtggct gctgcggtgg cgcgcgacgg atcggctctc agtgcattct gtgctgcgac
     2041 cagtgcccgc actgccgccg ccgcgatatc cggcgattgt tcgatcaatc gttccgtggt
     2101 cgccaacact cccatcgtgt agtcgaaaca gccgaccgga ccatcgccgc ggcgcacgtc
     2161 caaaaccagc gagccgtaac cgccacttat cgcgagctcg gcggccatgc cattggccca
     2221 gaacccgtcg attgcacggt cttcgagagc ttgcgcagcg gtcaggccga aattgacgct
     2281 cgatccgatg gcggctggta ctgggcctat ctgaaacccg tcacgttgcg gatcgagaca
     2341 agctgcggca agcagacgtc
//
LOCUS       DATAVD010001264         5239 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3658010, whole genome shotgun sequence.
ACCESSION   DATAVD010001264 DATAVD010000000
VERSION     DATAVD010001264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5239
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3658010"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(119..562)
                     /locus_tag="VHX39_24095"
     CDS             complement(119..562)
                     /locus_tag="VHX39_24095"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEX3994265.1"
                     /translation="MTCRPPVSCEGQGGFTLLEVLIAFAIASIALALLYRGATDGLLG
                     SRLAARTDEAVARARSRLAVLCDGAPLMPGEQSGDDGGGYTWRTQINRAAMETVARGG
                     EDQPSAPLRADMFAVRVIMLWPVTTQPHQISLETRCLSVGAADRQ"
     gene            complement(591..1013)
                     /locus_tag="VHX39_24100"
     CDS             complement(591..1013)
                     /locus_tag="VHX39_24100"
                     /inference="COORDINATES: protein motif:HMM:NF023444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HEX3994266.1"
                     /translation="MSQPRSAQRGFTLIETIVVLVILGLALSIVVGFLPRRNTTLELA
                     SATSRVAGALRIARSRALVEGHPVGFVTAPDGHGFRMENAQVNFGPSVTVVMAEPRIL
                     FAPDGSTSGGSLRVVVGGKQRVILVDWLTGRVVVAAAS"
     gene            complement(1010..2227)
                     /locus_tag="VHX39_24105"
     CDS             complement(1010..2227)
                     /locus_tag="VHX39_24105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX3994267.1"
                     /translation="MTTWRFKAVDGRGRAFDGEMDAPDEASVLAQIRRDGGMPLAVNQ
                     ARGGRFGSLSWSFGHGDTLTRQDVTNITRELATMLGAGQDIDRALRFLVETAPNRRAG
                     RALGALRDEVRNGNTLAAAMAKQSGSFSRLYIGLVRAGEAGGTLPVTLEQLADLLERE
                     RSLAATIQSALIYPALLLIAACGAVVLLLTQVLPQFVPLFEQSGVALPASTQFLIDTG
                     DVVSRYGLVALLIVLLLFLLCRVTLRQPGPRLAFDRFKLHLPIVGGLLREVMAARLAR
                     TLGSLLVNRVSLITALGITRDVLGNEAGVAAMDHAIPMAKAGAGLSVPLGSSGLFPAR
                     LIHLLRLGEETAQHGPMALRAAAIHEERVRVVTQRLVSLLTPAITIVMGALIAGIVSS
                     LLLAMLSLNDLAR"
     gene            complement(2224..3924)
                     /locus_tag="VHX39_24110"
     CDS             complement(2224..3924)
                     /locus_tag="VHX39_24110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspE/PulE family protein"
                     /protein_id="HEX3994268.1"
                     /translation="MDIATPTPVTVDTLAQMLADLGCDPRALERGRRGAADSGQRLDV
                     VLLQLGLVTERQIAEAAATLLGRPVVTPDDYPPVLPDCVSAVSPRFLRDARAVPLADI
                     GGTLHLALADPLDTFTPAALGAAVGRRVSVAAAVPVELEAALNRLLPAEAATTATDEG
                     DMAPEQDAERLKDLASEAPVIRLVNQIIGRAVEIGASDIHIEPFEDVLRVRYRLDGEL
                     HEAESPPMRLAAAITSRIKIMAKLDIAERRLPQDGRIQYAVRGQDVDFRVSTVATMYG
                     ESVVLRILDRSAVTFDWPHLGLAPAVVQRLTRALDRKDGIVLVTGPTGSGKTTTLYTA
                     LLTLNSINRKIVTIEDPVEYHLRGINQIQVQPQIKLTFDRLLQWIVRQDPNVIMVGEI
                     RNLETALTAVQAALTGHLVLSTLHTNSAAASITRLRDMGVDDYQIAAVLRGVMAQRLV
                     RRLCLTCRQPVKAAPELVRRFSLDQDNPGQPVTLYHPVGCPACRGSGYWGRLAIAEFL
                     EPDDTIERLIFSRAPDTEIERAAVDAGMVPMFRAGIDAALAGETTIEEVGRSIEADEL
                     "
     gene            4129..>5239
                     /locus_tag="VHX39_24115"
     CDS             4129..>5239
                     /locus_tag="VHX39_24115"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX3994269.1"
                     /translation="MSMTVLTVIIGAVVLMVLVVRLRARLALSLAKHRSLAGHPRTAR
                     RIAALMPFYDYDAQRFFRADDAPADVAARRRDGFRRLAGFWRQRFARTLALTAEAAAG
                     VSDLQFTAAYRVPFQFSRVVRQHLPTGSFLASSSGVTVTDLDGNVFYDLTGSYGVNLL
                     GHDFYKDCIDRGAERVRDLGPVLGAYHPAVADNVARLRKISGLDEVSFHMSGTEAVMQ
                     AVRLARYHTNRPRLVRFCGAYHGWWGDVQPGIGNPMPADGTLTLAEMSERTLHVLRTR
                     RDIACVLVNPLQALHPNAAAPADGSLVDSGRQAGFDRAAYTTWLQQLRAVCDARGIVL
                     IFDEVFVGFRLALGGARAYFGVQPDLITYGKTLGGG"
BASE COUNT          940 a         1732 c         1691 g          876 t
ORIGIN      
        1 ggaacgaaat cgtcgaagcg ctgatactga cccgcttctc ccggagcgag ttgatgtccc
       61 cgggcgcaac ctgatggatg gcccggcaat tatttgaacg gcgggaccac acaattcctc
      121 attgccgatc cgccgcgccg actgacagac agcgcgtttc aagcgatatt tggtgtggtt
      181 gggtggtgac cggccacaac atgatcacac gaacggcgaa catgtccgct cgcaacgggg
      241 ccgagggctg atcctcgcca cctcgcgcaa cggtttccat ggcggcacgg ttgatttggg
      301 tccgccaggt gtaaccgccc ccatcgtcgc cggattgctc accgggcata agcggtgccc
      361 catcgcatag cacggccaac cgcgagcgag cccgcgcgac tgcctcatcc gtgcgtgccg
      421 ccaaacgaga gccaagcaac ccgtcggttg ctccgcgata cagcagtgcc agcgcaatcg
      481 aagcaatcgc gaaggcaatc aggacctcga gcaaggtaaa gccgccctgc ccttcacagc
      541 tcaccggcgg tcggcacgtc atgactccct gccccgggtg aaccccgacc tcacgacgcc
      601 gcggcgacga ccacgcggcc ggtcagccaa tccaccagga tcacacgctg tttgcctccc
      661 accaccacgc ggagcgaccc gccggaggtg ctgccgtccg gtgcgaacaa gatccgcggc
      721 tccgccatca cgacggtgac cgacggccca aaattcacct gagcgttctc catacggaag
      781 ccatgcccat caggggccgt gacgaacccc accggatgcc cctcgaccag ggcgcgcgag
      841 cgggcaatcc gcagcgctcc ggcgacccga gaggttgcgg aggccagctc cagcgtggtg
      901 ttccggcgtg gcaggaagcc gacgacgatg ctgagtgcga gaccaaggat caccaggacg
      961 acaatcgtct cgatcaacgt gaagccgcgt tgcgccgatc tgggctggct catcgcgcca
     1021 gatcgttcag gctgagcatc gcgagcaaca gcgacgagac gatccccgca atcaaggcgc
     1081 ccatgacgat cgtgatcgcc ggggtcagca acgataccag ccgctgagta acgacccgca
     1141 cgcgctcctc atggattgcg gccgcgcgca acgccatcgg cccgtgttgg gctgtctcct
     1201 cgccaagccg caacaggtgg atcaggcgtg ccgggaacaa tccggaagag cccagaggca
     1261 ctgacaagcc ggctcccgcc ttggccatgg gtatggcgtg gtccatcgcc gccaccccgg
     1321 cctcgttacc cagaacgtca cgcgtgatac cgagtgccgt gatcagcgag acccggttga
     1381 ccagcagact gccaagcgtg cgtgcgagcc gcgccgccat cacctcgcgc agcaagccgc
     1441 cgacgatggg taaatgcagc ttgaagcgat cgaacgcgag ccgtggaccg ggttgccgca
     1501 aggtcacgcg gcacaaaagg aacagcagca gcacgatcag cagtgcgacc aggccataac
     1561 gggacaccac gtcaccggtg tcgatcagaa attgcgtgga cgccggcagg gccacgccgc
     1621 tttgttcgaa caacggcacg aattgcggca gaacctgggt cagcagcagc accaccgcgc
     1681 cacaggcagc gatcagcaac agggccgggt agatgagcgc ggactggatg gttgccgcga
     1741 ggcttcgttc gcgctccaaa aggtcggcca gctgttcaag ggtcaccggc agagtgcccc
     1801 cggcctcgcc ggcgcggacc agcccaatgt acaggcggga aaaactgccg gattgctttg
     1861 ccatcgcggc ggcgagcgta ttgccgttcc gcacctcgtc ccgcaacgcc ccgagcgcgc
     1921 gccccgcccg ccggttcggc gccgtctcca ccaggaaccg cagcgcgcga tcgatgtcct
     1981 ggccagcgcc cagcatggtg gcgagttcac gggtgatgtt ggtgacgtcc tggcgggtta
     2041 aggtgtcgcc gtgaccaaac gaccaggaaa ggctgccaaa ccggccgcca cgcgcctggt
     2101 tgacagccaa tggcatgccg ccgtcgcggc ggatctgagc cagtactgat gcttcgtccg
     2161 gagcgtccat ctcgccgtcg aatgcccggc cccggccgtc gaccgctttg aagcgccacg
     2221 tggtcataat tcgtcggctt cgatgctgcg gccaacttct tcgatcgtcg tctcgccggc
     2281 cagcgcggca tcgatcccgg cgcggaacat cggcaccatg ccggcgtcaa ccgcggcgcg
     2341 ctcgatctcg gtgtcgggcg cgcgggagaa aatcagccgc tcgatcgtgt catccggctc
     2401 caggaactcc gcgatcgcca gccggcccca atatccagaa ccgcgacatg ccggacagcc
     2461 aaccggatga tacagcgtga ccggctggcc cggattgtcc tggtcgagac tgaaccgtcg
     2521 caccagttcc ggcgcggcct tgaccggctg gcggcaggtc aggcacagcc gccgcaccag
     2581 ccgttgcgcc atgacgccac gcaacactgc ggcaatctga taatcgtcca cgcccatatc
     2641 gcgcagtcgc gtgatcgagg ccgcggccga gttggtgtgt agggtcgaca gcacgagatg
     2701 cccggtcaac gcggcctgca ccgcggtcag agcggtttcc aggttgcgga tttcaccaac
     2761 catgatcacg tttgggtcct ggcgaacgat ccactgcaac agccggtcaa acgtgagttt
     2821 tatctgcggc tgaacctgga tctggttgat gccgcgcagg tgatattcga ccggatcctc
     2881 gatcgtgacg attttccggt tgatggaatt caatgtcagc agcgccgtat acagcgtcgt
     2941 ggtcttgccg ctgccggttg ggccggtgac cagcacgatt ccgtccttgc ggtcgagcgc
     3001 tcgcgtcagg cgctgcacca cggcgggcgc aagccccaaa tgcggccaat cgaacgtaac
     3061 ggcgctgcgg tcgaggatcc gcagcaccac gctctcccca tacatcgtcg ccaccgtcga
     3121 gacgcggaaa tccacgtcct ggccgcgcac cgcgtattgg atgcgcccgt cctgcggcag
     3181 ccggcgctcg gcgatgtcga gtttcgccat gatcttgatg cgcgacgtga tggcggcggc
     3241 gagacgcatc ggcgggctct ccgcctcgtg cagttcgcca tccaggcggt agcggacccg
     3301 cagcacatcc tcgaatggct cgatgtggat gtcggacgcg ccgatttcca cggctcggcc
     3361 aatgatctgg ttgaccagcc gaatgaccgg ggcttcgctg gcgagatcct tcagtcgctc
     3421 ggcatcttgc tcgggagcca tatctccttc gtcggtcgct gtcgttgccg cctcggctgg
     3481 caggagccgg ttcagtgcgg cctccagttc gaccggtacg gcagcggcga cactgacacg
     3541 ccggccgact gcggcgccca gtgcggcggg ggtgaaggta tcgagcggat cggcaagggc
     3601 gaggtggagg gtgccgccga tatcggccaa cggaaccgcc cgtgcatcgc gcaggaagcg
     3661 cggcgagaca gcggacacac aatcgggcag taccggcgga tagtcgtccg gcgtaaccac
     3721 cggcctgcca agcaaagtgg ccgcggcctc ggcgatctgt cgctcggtga ccaggccgag
     3781 ttgcaacaaa acaacgtcga ggcgctggcc actgtcggcc gcgccgcgcc gtccccgctc
     3841 cagcgcgcga ggatcgcagc ccagatcggc caacatctgg gccagggtat cgacggtcac
     3901 cggggtcggg gtggcaatat ccatgtgagt gtccactata atcggggtcc gcacggattg
     3961 cgatgcgcgg gcccggtccg gatcagtggc gccgcggccg gcaaatgtcc cggatcgcgg
     4021 ttcgccggcg acccggtcag gtcattgtga cgcacaatat tcattatcgg tgagcgaagt
     4081 gtcatgtgat caatcgatta gcatgcaacg cgaggcgaat ccgctcacat gtccatgaca
     4141 gttttgaccg tgatcatcgg cgccgtcgtt ttgatggtcc tggtggtcag gcttcgagcg
     4201 cgcctggcac tgtccctggc aaagcaccgg tcgctggcgg gacatcccag aaccgcgcga
     4261 cgaattgccg cactgatgcc gttctacgac tatgatgcac agcggttctt tcgcgccgac
     4321 gatgcgccgg ccgacgttgc agcgcggcgc cgcgacgggt tccggcggtt ggcggggttc
     4381 tggcgccaac gcttcgcgcg cactctggca ctgaccgcgg aagccgcggc cggcgtgtcc
     4441 gacctgcagt tcaccgccgc gtatcgcgtg ccgtttcagt tcagccgcgt cgtcagacag
     4501 catctgccga ccggatcgtt cctggcatcg tcatccggcg tgacggtcac cgatctcgac
     4561 ggcaacgtat tttacgacct gaccggatcg tatggagtca acctgctcgg ccatgacttc
     4621 tacaaggact gcatcgaccg cggcgcggag cgggttcgcg atctggggcc ggtcctgggt
     4681 gcctatcatc ctgcggtggc ggacaacgtg gcgcggctgc gcaaaatctc cggactggac
     4741 gaggtgtcgt ttcacatgtc cggcaccgaa gcggtgatgc aggcggttcg gctggcgcgc
     4801 taccatacca accggccgcg tttggtgcgg ttttgcggcg cctatcacgg ctggtgggga
     4861 gacgttcagc ccggtatcgg caatccgatg cccgccgacg gcacgctgac cctcgcggag
     4921 atgtcggaac gcacattgca tgtgttgcgc acacggcgag acatcgcctg cgttctggtc
     4981 aacccgttgc aggcactgca tccgaatgcc gccgctccgg cggacggctc gctggtcgac
     5041 agcgggcggc aggccggatt tgaccgcgcg gcttatacga cgtggttgca gcaactgcgc
     5101 gcggtctgtg atgcgcgcgg gattgtgctg atatttgacg aggtgttcgt cgggtttcgc
     5161 ctggcgctcg gcggggcccg ggcgtatttc ggcgtccagc ccgacctgat cacctatggc
     5221 aagacccttg gcggcggtc
//
LOCUS       DATAVD010001265         5973 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2166905, whole genome shotgun sequence.
ACCESSION   DATAVD010001265 DATAVD010000000
VERSION     DATAVD010001265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5973
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2166905"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1583)
                     /locus_tag="VHX39_24120"
     CDS             complement(<1..1583)
                     /locus_tag="VHX39_24120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994270.1"
                     /translation="MANNLGTATTISQLNSEIVELSTEAANSGTYDISLGSNIALGST
                     QLEAINLAPGVTLDLIGNGNTLDGGGTQRGLFVYAGAVDISNLALNDFLAKGGSADLG
                     GGGAGLGGGLFIASNRAGDAGAVTLDSVSFSHDSAQGGASGVNVAGGEGSGGGGMGGN
                     SGNINADNGGGGIGGNGGGAVSSTGVITVNGQTGIIPGAAGGAGNIGGYAPPFSDNQG
                     QTNGAGGASGGGGGGGGADNTQGAGGGGGVGAVNSAFGGNGGFGGGGGGTNIFVFGAG
                     KGGFGGGGGSSHESGSGGFGGGSGAGYSRGNASPGGFGAGDGTYSGNLSGGGGLGAGG
                     DIFVQAGASLTITGSSVVNAGSVAGGAAINPGQAFADGIYLQGSNPVLTFALTGLETV
                     AGVIGDDTGSAEAANYAGMSDLNSIETIYTPGSVGITISGNGTLVLNAVNTFTGGTAL
                     NGGVLDIAAGASAGSGAITFGGGVKLKLDASVSGTTTFENTLSALQIGDQIDLAGLGF
                     NATQPRLNGNSVAVTGTGGT"
     gene            1861..2916
                     /locus_tag="VHX39_24125"
     CDS             1861..2916
                     /locus_tag="VHX39_24125"
                     /inference="COORDINATES: protein motif:HMM:NF025878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX3994271.1"
                     /translation="MIRVDKSLLDTFGVVEIRAEDLDMDGRFTRQLAAVNGVMTYRLR
                     GKGTLGLENEQVLSVQALRREGILRYCYNSDLIGTDITLVGNGQPHLYCLVVMLSGAM
                     ELVKGPSGAAIAQGTQGMIVQGLPGTRLLTTDTSARLVLWVDGGRLERALGAQIGEPP
                     RQSLAFSTSIDWTTGPAASVQRLMTYLMDELRDPHGITTDAVARETFTELLLQTMLRR
                     LEHNYTARLDRPAPAAIPRHLRRAEAFMHESADRPITLADVAAGAGCSLGTLQTAFRR
                     FRDTTALGALHDIRLQRIRQALLTAAEDESTGAIARRFGFTNPTRLIAAYGRRFGERP
                     NETRKRGHVGSELSGLS"
     gene            complement(2902..4752)
                     /locus_tag="VHX39_24130"
     CDS             complement(2902..4752)
                     /locus_tag="VHX39_24130"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX3994272.1"
                     /translation="MMPVEDGSVGHAPATTQSFDQASATADTIQTVNAGGCDLGDRGT
                     ERILQLFATHIATGDLQAALQAASDACHMAPHAPQPHYAYGRAWLALGEPAQAARAFA
                     EAIRITPSWPDAWISFGVAQYRQGAIEAAKTAMRQALYRAPNHPVATANLCAFMRISG
                     ESDAALALLHHSLARDPDNAGVRLNLVADLLLEERAADALALLDAAPALPDSLSALRH
                     WHLQRALALLQLGRTNEARSTLDALAALGPIPPALAPLWHWRLVLLAMTERDPAVARR
                     EADRMAVAVAAMGPEAVPEHQIMAHYDLAKFRSGQNDHATAFVHWQAGHTLLRRFQSF
                     SREAHSAFIDANMGLLDRTRFATGPRASNADPTPVFIVGMPRSGTTLCEQIIAAHAQA
                     FGAGERPALTEAFATLSTGDDDNAAVRHLAGLDAATLDAAASSYLTALHALAPDKGRI
                     IDKLPSNYLRLGLVGLLLPGAKIIHCVRDPRDIGLSIFTFRFHGQHGYAHDLGDLGWT
                     IAQQTRLMAHWRAALPNPILTVALADWVTDFDATLARVLAHLDLPPDANCARFYEADT
                     RVRTVSRAQVRQPVNARGLGRWRTYATQLAPLIAELERSGALAAWHSGQS"
     gene            complement(4774..4962)
                     /locus_tag="VHX39_24135"
     CDS             complement(4774..4962)
                     /locus_tag="VHX39_24135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994273.1"
                     /translation="MYFENQHFDIMDFIRDAYGDNISLNGGLMLRECAALMCHRAQTF
                     KKTNSLAVEPFSLLREDS"
     gene            complement(5048..>5973)
                     /locus_tag="VHX39_24140"
     CDS             complement(5048..>5973)
                     /locus_tag="VHX39_24140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032492304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ISKra4 family transposase"
                     /protein_id="HEX3994274.1"
                     /translation="LGKPQAVETARQRTLRVGARLEQEAVAGAGSKPAVVTKSIALSI
                     DGGHVRAARQYQGRTFEVLLVQVSNHEGKRVIFASVPAEATSQTRQLRGVLHGLGATP
                     ATPVTILSDGAAGPRLLGEAASPGPTHHVLDWFHFAMRVQHVAQAATSGPNTTESDRN
                     AGDRLTETIERIRWRLWHGQVKRALDLIAETVAAMNVAAGDKSPIAAAARKVARLLGD
                     LETYVSGQSDIIIDYAPTRRREEPISTAITESTVQWLLHRRMNAQQQMRWSPRGAHLM
                     LKVRTTVVNGTLNRDYGVAERWARRPFRRAA"
BASE COUNT         1041 a         1917 c         1920 g         1095 t
ORIGIN      
        1 gttccacctg taccggtcac ggccactgaa ttgccgttca ggcgtggctg tgtcgcattg
       61 aagccgagcc ccgcgaggtc gatttgatcg ccgatctgaa gcgccgagag ggtattttcg
      121 aaggtcgtcg tcccgctgac cgatgcgtcc agcttcagct tcacgccacc gccgaaggta
      181 atcgcgccgg atccagcgga agcgccggcc gcgatgtcca gcacgccgcc gttcaacgcg
      241 gttccgccgg tgaaagtgtt gacggcattc agaaccagcg tgccattccc gctgatcgtg
      301 attccgaccg atcccggtgt atagattgtt tcgatgctgt tgaggtctga catgccagcg
      361 taattagccg cctcggcgga gccggtgtcg tcgccgatca cgcccgcgac tgtttccagg
      421 ccggtaaggg cgaatgtcag aaccgggttg ctgccttgca ggtaaatgcc gtcggcgaag
      481 gcctggccgg gattgatggc ggcaccaccg gcgacagagc ctgcgttgac aacactgctg
      541 cccgtgatgg tcagggacgc cccggcctga acgaaaatgt cgccgcccgc gcctagtccg
      601 ccgccgccgc tgagattgcc cgaataggta ccgtcgccag caccgaatcc cccggggctt
      661 gcgttacccc tcgaataacc tgcaccgctg ccaccgccga atccgccgct gccactttcg
      721 tggctggaac cgccgccacc gccgaatccg ccctttcctg ccccaaaaac aaaaatattt
      781 gtgccaccgc cgccgccacc aaaaccaccg ttaccgccga atgcagagtt gacggcacca
      841 acgccaccgc caccgccggc accttgggta ttgtcggcac cgccgccgcc gccgccgccg
      901 ccgctcgcgc cgccggcacc attggtttgt ccttgattgt cggaaaaggg cggggcgtat
      961 ccgccgatgt tgcctgcgcc gccggcagcg ccggggatga tcccagtctg gccattcaca
     1021 gtgatcacac cggtactgct gacggcgcca ccgccattgc cgccgatgcc accgccaccg
     1081 ttgtcggcgt ttatattacc gctattgccg cccatccctc cgccgcccga gccctcaccg
     1141 cccgcaacgt tcacaccgct cgcgccgcct tgggcactgt catgggagaa cgagaccgaa
     1201 tccaaggtca ccgcgcccgc gtcgccggct cggttcgagg cgatgaacag gccgccaccc
     1261 agtcccgccc caccgccgcc gaggtcggcg ctgccgccct tcgccaggaa atcattcagg
     1321 gccaggttgc tgatgtcgac cgcgccggca tagacgaaca acccgcgttg cgtgccgccg
     1381 ccatccagcg tgttgccgtt gccgatcagg tccagcgtca caccgggcgc cagattgatc
     1441 gcctccagtt gcgtgctgcc cagggcgata ttgctgccca ggctgatatc gtaggtgccg
     1501 ctgttcgccg cctcggtcga aagctcgacg atctcgctgt tcaattggct gatggtggtg
     1561 gcggtgccga gattattggc catctggatt tcctttgatc aatacccgat cgtctcggca
     1621 tacgcggacc gaggggcgaa agccgccccg gcatccggtc tggtgtgaca cctcgcggca
     1681 gggccgggtc gccgcgtcaa gccgccgtca gtgcgcgggc accggcatat ggccaaggta
     1741 tgaggctggc aataatgcca atggtatatg ttgcgctcta ctgatgaatc tgtaactgca
     1801 ttgacgtatc cgtaccgtgt acgtcacatg cctatccagc ttcggtgagt gaccttgcct
     1861 gtgatcagag tcgataaatc cctgcttgat accttcggcg tggtggagat ccgcgccgag
     1921 gatctcgata tggatggacg gttcacgcgt cagcttgccg ccgtcaatgg cgtgatgacc
     1981 tatcggctgc gcggcaaggg aacgttggga ttagagaatg agcaggtcct gagcgtgcag
     2041 gcgttgcgcc gcgagggaat attgcgatat tgttacaact cggatcttat cggaacggac
     2101 ataacgcttg tcggcaatgg ccagccacat ctgtactgcc tggtggtgat gctgtcgggc
     2161 gcgatggaac tggtaaaggg cccgagcggg gcggccatcg cgcagggcac tcagggcatg
     2221 atcgtacagg gtttgccggg gacgcggctt ctgacgaccg acaccagcgc gcggctggtg
     2281 ttgtgggtcg acggcgggcg cctggagcgc gcgctggggg cccagattgg cgaaccgccg
     2341 cgccagagcc tcgctttctc caccagcatc gactggacta ccggaccagc ggcttcggtg
     2401 cagcgcctga tgacatatct gatggacgaa ttacgcgacc ctcatggcat caccaccgac
     2461 gcggtcgctc gggaaacctt tactgaatta ctactgcaaa ccatgctgcg acgtctggag
     2521 cacaactata ccgcgcgtct ggacaggccg gcgccggccg cgatccctcg tcatctgcgt
     2581 cgggccgaag ccttcatgca tgagtcggcg gaccgcccga tcacgctggc cgacgtcgcc
     2641 gccggcgccg ggtgcagcct gggcacgctg cagacggcgt tccgccggtt tcgcgacacc
     2701 acggcgctgg gggcgctgca cgacatccgg ttgcagcgta tccgccaggc gctgctgacc
     2761 gcggcggagg acgaatcgac gggggcgatc gcgcgccgtt tcggatttac caacccgacc
     2821 cggctgatcg ccgcctacgg ccgccgtttc ggagagcggc caaacgagac gcggaaacgc
     2881 ggccacgtgg gatccgaact gtcaggactg tcctgagtgc catgcggcga gtgcgcccga
     2941 ccgttctaat tcagcaataa gtggcgccag ttgcgtggcg taggtccgcc aacggccaag
     3001 gccgcgcgca ttcaccggtt gccttacctg ggctcggctg accgtgcgta cccgggtgtc
     3061 ggcttcgtag aagcgggcgc agttggcgtc gggcggcagg tcgagatgcg ccagcacgcg
     3121 cgccagcgta gcgtcgaaat ccgtcaccca gtcggcgagc gctacggtca gtatcggatt
     3181 tggcagggcg gcgcgccaat gtgccatcag ccgtgtctgc tgggcgatcg tccagcccag
     3241 gtcgcccagg tcgtgggcgt agccgtgctg gccgtggaag cggaaggtga agatcgacag
     3301 tccgatgtcc cttggatcac gcacgcaatg gatgattttg gctccgggca gcagcaggcc
     3361 gacgaggcca aggcgaaggt aattgctcgg caacttgtcg atgatacggc ccttgtccgg
     3421 cgccagcgcg tgcaaggccg tgaggtagct tgatgccgcg gcatcgaggg tcgctgcgtc
     3481 gagaccggca aggtgtcgca ccgccgcgtt gtcgtcatct ccggtgctga gagtcgcgaa
     3541 tgcctcggtg agggccggcc gctcgccggc accgaacgcc tgtgcgtggg cggcaataat
     3601 ctgttcgcac agcgtggtgc cggagcgcgg catgccgacg atgaataccg gggttggatc
     3661 ggcgttgctg gcgcgcggac cggtggcgaa gcgggtgcgg tcgagcaaac ccatgtttgc
     3721 gtcgatgaat gcgctatgcg cctcgcgtga gaacgactgg aagcggcgca gcagtgtatg
     3781 tccggcctgc cagtggacga aggcggttgc gtggtcattc tgaccggacc tgaacttcgc
     3841 caggtcgtaa tgcgccatga tctggtgttc cggcaccgcc tcgggtccca tcgcagccac
     3901 ggccaccgcc atccgatccg cctcccgccg ggcgaccgca gggtcgcgtt cggtcattgc
     3961 cagcagcacc agccgccagt gccacagcgg cgccagcgcc ggcgggatcg ggccgagtgc
     4021 cgccagtgcg tcgagcgttg accgggcctc gttcgtccgg cccagttgca gcagcgccaa
     4081 cgcacgctgc aaatgccagt gacggagcgc cgacaggctg tcgggcaatg ccggggcagc
     4141 gtcgagcaag gcaagggcat cggcggcgcg ttcctccagc agcaggtcgg cgacgagatt
     4201 gagccgcacg ccggcattat cgggatcgcg cgcgaggctg tggtgcagca gggccaaggc
     4261 tgcatcggat tcgccgctga tgcgcatgaa ggcgcagaga ttggccgtgg cgacaggatg
     4321 gttcggcgct cggtacagcg cctgacgcat ggccgtcttg gcggcttcaa tggcgccttg
     4381 ccgatattgg gcgacgccaa aactgatcca ggcgtccggc catgacggcg tgatgcggat
     4441 ggcctcggca aaggctcggg cagcctgagc gggttcgccc agggcaagcc aggccctgcc
     4501 ataggcataa tgtggctgcg gcgcatgcgg cgccatatgg catgcatcgc tggcggcctg
     4561 cagcgcggcc tggaggtcgc cggtggcgat atgtgtggca aagagttgca atatacgctc
     4621 ggtgcccctg tcgccgaggt cgcaaccccc ggcgttgacg gtctgaatgg tgtctgccgt
     4681 cgcggaggcc tggtcgaacg attgggtggt tgccggtgca tgccccaccg acccatcttc
     4741 aactggcatc atcaccctcg accgatccta aattcagcta tcttctcgca gcaggctgaa
     4801 tggttcaacg gctaaactgt tggtcttttt aaatgtctgc gcccggtggc acataagcgc
     4861 cgcgcattct ctcagcatca gcccgccatt gagcgagatg ttgtccccat aggcgtcacg
     4921 aatgaaatcc ataatgtcga aatgctgatt ttcgaaatac atcgcgtggg catcgtcacg
     4981 gcccgtgcca cagacgatac gaccgatttt gcctgaatcg aaagagaccg tccagaacgt
     5041 gggggggtca ggccgctctc cgaaacggac gtcgcgccca acgttccgcg acgccataat
     5101 cccggttaag cgtgccgttc acgacggtgg tccggacttt cagcatcaaa tgagcacccc
     5161 gcggagacca gcgcatttgc tgctgggcat tcattcgccg atgcagcagc cattgcaccg
     5221 tgctctcggt gatcgccgtc gaaattggtt cctcgcgtcg gcgggttggc gcgtagtcga
     5281 tgatgatatc cgattgtcca gaaacatatg tctcgagatc gcccagaagg cgcgccacct
     5341 tgcgtgcggc ggcagcaatc ggcgacttat cgccggctgc aacgttcatt gcggcgacgg
     5401 tttcggcaat gagatccaga gcccgtttga cctgaccatg ccagagacgc catcggatcc
     5461 gctcgatcgt ctcggtgagg cggtcaccgg cgttacgatc cgactctgtc gtattgggcc
     5521 cgctcgtggc cgcctgagcg acgtgctgaa cccgcatcgc gaagtggaac cagtcgagca
     5581 catgatgagt tggaccgggg ctggcggctt ctccgagcaa tcgcggtcca gcggcaccat
     5641 cgctcaggat ggtaaccggt gtcgctggcg tcgctcccaa tccatgaagc acgccgcgca
     5701 actgtcgcgt ctgcgaagtc gcctccgccg gcacgctggc gaatatgacc cgcttcccct
     5761 catggttgct gacctgaacg aggagaacct cgaacgtgcg cccctgatac tgacgagccg
     5821 cccgcacgtg gccgccgtca atggagagtg caatcgattt cgtcaccacc gccggcttgg
     5881 atcccgcccc cgcgacagcc tcttgctcca acctggcgcc aacacgaagg gttcgctgcc
     5941 gggcggtttc cacagcttgc ggcttgccga gtg
//
LOCUS       DATAVD010001266         2577 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2166986, whole genome shotgun sequence.
ACCESSION   DATAVD010001266 DATAVD010000000
VERSION     DATAVD010001266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2577
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2166986"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..967)
                     /locus_tag="VHX39_24145"
     CDS             complement(<1..967)
                     /locus_tag="VHX39_24145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014189215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX3994275.1"
                     /translation="MTLRAGETSVRLIDIGRPPVMPETGKPATVSTPIVAGCGVIPLK
                     GFDRLSEQHSSGHTQMPTDQARAWLSAIAESTDDAIIGKNLNGIVISWNKAAAAMFGF
                     AADEIVGQPITAIIPPERLDEEVLILDRVRRGERLVHFETERRRKDGTIIPVTLTISP
                     IRDDAGAIIGVSKIARDLSEQNRAHQELRQREALLRSILDTVPDALIVIDDQGRIQSF
                     STAAARLFGYDIAEVLDHNVSMLMPSPYREEHDGYLKRYLTTGERRIIGIGRVVVGKR
                     KDGTTFPMELSVGAVNLPGERRFTGFIRDLTEPQDREHRLHEMQAE"
     gene            1104..>2577
                     /gene="ppsA"
                     /locus_tag="VHX39_24150"
     CDS             1104..>2577
                     /gene="ppsA"
                     /locus_tag="VHX39_24150"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: protein motif:HMM:NF005057.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008986 - pyruvate, water dikinase
                     activity [Evidence IEA];
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HEX3994276.1"
                     /translation="MTSSSLNVRWFDTIRLEDVPLVGGKNASLGEMYKSLGSAGVRVP
                     NGFALTAASYRDALTQADAWPRLHQLLDNFDIHDLTALAERAAEARAIVHRATGTAAL
                     RQDIATAYRKLEAEYGKDVAVAVRSSATAEDLPNASFAGQHESYLNVSGPDDLFEACR
                     LCFASLFTDRGIVYRVNNGFDHFKVALSVGVMKMVRSDMAASGVIFTLDTESGFRDVV
                     FITGAYGLGENVVQGTVDPDEFFVHKPTFRQGHHAVLRRTLGQKQLRLTCAAGHIAAA
                     TLNVPTEAAERAHFCLDDSEVIELADNAIRIEEHYSALAGHSMPMDIEWAKDAGDGRL
                     YIVQARPETVASRRETGFFESYRLTGNAPVLVRGKAVGEKIGTGVVRVITKAADLKEF
                     QPGEVLVASATSPDWEPVMKTAGAIVTDRGGRTCHAAIVARELGVPAVVGSENATRAL
                     QTGTVVTVSCADGETGTVHSGTVPFEVTRVPMSKLALPKIQ"
BASE COUNT          477 a          788 c          818 g          494 t
ORIGIN      
        1 attcggcctg catctcatgc aaccgatgct cgcgatcctg gggttccgtc aggtcgcgga
       61 tgaagccggt gaaccgccgc tcaccaggga gattgacggc gccgaccgac aattccatcg
      121 ggaatgtcgt gccgtccttg cgcttgccga cgacgacccg gccaatgccg atgatccggc
      181 gctcgccggt tgtcaggtaa cgcttcagat agccgtcatg ctcctcgcga tacggcgacg
      241 gcatcagcat actgacgttg tggtccagca cctcggctat gtcgtagcca aacagccgcg
      301 cggcggcggt gctgaacgac tggatgcggc cctggtcgtc gatcacgatc agggcatccg
      361 gtacggtatc gaggatcgaa cgtaacaaag cctcgcgctg ccgcagttcc tggtgcgcgc
      421 gattttgttc gctgagatcg cgggcaatct tggaaacacc gatgatggcg cccgcgtcgt
      481 cacggatcgg cgagatggtc agtgtcaccg gaatgatggt gccgtccttg cgccgccgct
      541 cggtctcgaa atggaccagc cgttcgccgc ggcgcacccg atcgaggatc aggacttctt
      601 cgtccagccg ctccggtggg atgatggcgg tgatcggttg gccgacgatc tcatcggcgg
      661 caaagccgaa catcgcagcg gcggctttgt tccaggaaat gacgatgccg ttgaggttct
      721 tgccgatgat cgcatcgtcg gtcgactcgg cgatggccga gagccaagcg cgtgcctggt
      781 cggtcggcat ctgcgtgtgg ccgctgctgt gttgttcgga caatcggtca aaccccttca
      841 gcggaatcac gccgcaccct gcgacaattg gcgtactgac ggtagcaggc ttcccggttt
      901 cgggcatcac gggtggacgg ccgatatcga tcagtcgaac cgatgtctcg cccgcccgaa
      961 gtgtcactgg aacttcgtcc gccccggtct acgacagtcg cggtcagatg aaccaacccg
     1021 gcgcgcccgt ctgatccaaa tcaatgcatc ggggttgggc acgccggaca ttgaacccaa
     1081 cagcagcgag ggacggtcgt accatgacct cttcatcact caacgtacgt tggttcgaca
     1141 ccatccggtt ggaggacgtt ccgctggtcg gcggcaagaa cgcctcgctt ggtgagatgt
     1201 acaagtctct gggctcggct ggggtacgcg tgcccaacgg tttcgcgctg accgctgcgt
     1261 cgtatcggga tgctctgacc caggcagatg cctggccgcg gttgcatcag ttgctcgaca
     1321 actttgacat ccacgatctg acggcgctgg ccgagcgagc agcggaagcg cgcgccatcg
     1381 tccatcgcgc caccgggacc gcggcgctgc gccaggatat cgcgaccgcg tatcgcaaac
     1441 tggaagccga atacggcaag gatgtcgcag tcgcggttcg cagttccgcc accgccgagg
     1501 atctgcccaa cgccagcttc gccgggcagc acgaaagtta tctcaacgtc agcggccccg
     1561 acgatttgtt cgaggcgtgc cggctgtgtt ttgcctcctt gttcaccgac cgcggcatcg
     1621 tttaccgggt gaataacggg ttcgatcatt tcaaggtcgc attgtcggtc ggcgtcatga
     1681 aaatggttcg ttctgacatg gcagcgagtg gggtgatctt cactctcgac accgaatccg
     1741 gctttcgcga cgttgtcttc atcaccggtg cctacggact gggcgagaac gttgtccagg
     1801 gcaccgtcga tccggacgag ttcttcgtgc ataaaccgac ctttaggcaa ggacatcatg
     1861 cggtattgcg ccgtacgctt gggcaaaagc agttacggct cacctgcgcg gcaggccata
     1921 ttgccgccgc cactttgaat gtgcccaccg aggccgcaga acgggcgcat ttctgcctgg
     1981 acgactccga ggtgatcgag ttggcggaca atgcgatccg tatcgaagag cactattcgg
     2041 cgcttgccgg tcattcgatg ccgatggaca tcgaatgggc aaaggatgcc ggtgacggca
     2101 ggctttacat cgtgcaggcg cggccggaga cggttgcctc ccggcgcgaa accgggttct
     2161 ttgaaagcta caggctgacc ggcaacgcgc cggtgctggt gcgcggcaag gccgttggcg
     2221 agaagatcgg caccggagtg gtacgggtca tcaccaaagc cgccgacctg aaggaattcc
     2281 agccaggaga ggtgctggtt gccagtgcca ccagtccgga ctgggaaccg gtgatgaaga
     2341 ccgcgggcgc aatcgttacc gaccgcggcg gacgcacctg tcatgccgcc atcgtcgccc
     2401 gcgaactcgg cgtgccggcc gtcgttggct ccgagaatgc gacccgagcc ctgcagaccg
     2461 gtaccgttgt cacggtgtcg tgcgccgacg gtgaaaccgg cacggttcac agcggcaccg
     2521 tcccgttcga agtgacccgc gtgccaatga gcaagctggc attgccgaaa atccaga
//
LOCUS       DATAVD010001267         1584 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2167112, whole genome shotgun sequence.
ACCESSION   DATAVD010001267 DATAVD010000000
VERSION     DATAVD010001267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2167112"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1061
                     /locus_tag="VHX39_24155"
     CDS             <1..1061
                     /locus_tag="VHX39_24155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994277.1"
                     /translation="PAFYLAAYPAIEQDLGRNPADGDAAPHYITLGRARGYLPNASAP
                     RAENGAALNSPFGGFWTDQANALDLVQARLDLGWIRQREAAMLRIFALDGIVDFDRLV
                     GRDQVTDAALVAAQAFTGMFQEALFAPPASTADPQPWRPELTEQSVAALDLHMLSPPI
                     RQLLLDNVLTDFLALIFGAPPRLIESRAFLREAAPPDRDVAWHACSLPLQMVAVTVPL
                     EDSQEGPASAWPGSHRLPDLLWSGEHVSLSEARRAGVRDFSQAVAQREDRVRGLLHGQ
                     EPRRLDAVAGRRTIRHANLIHEVNPPRPPLQRRTLTAWYCPSYVVPCYLETTQARLHI
                     QDGVGFSSGVYPASDPRD"
     gene            1062..>1584
                     /gene="hpnK"
                     /locus_tag="VHX39_24160"
     CDS             1062..>1584
                     /gene="hpnK"
                     /locus_tag="VHX39_24160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hopanoid biosynthesis-associated protein HpnK"
                     /protein_id="HEX3994278.1"
                     /translation="MQRVVFSADDFGLTPAVNEAVERAHRDGILDQASLMVAGQAADD
                     AIRCARALPSLRVGLHLVVIEGPAVLPPCEIPDLVDASGQFPSDQARLGFRYFFRPSV
                     RRQLAKEIRAQFATFAATGLTLDHANAHKHMHLHPIVGKLLIEIGREFGLHSIRIPAE
                     PPATLALTGTWAGI"
BASE COUNT          274 a          507 c          485 g          318 t
ORIGIN      
        1 atccggcatt ctatctcgcg gcctatcccg cgatcgagca ggacctcggc cgcaaccctg
       61 cggacggcga cgctgcacca cattacatca ctctggggcg agcacgtggc tacctgccaa
      121 atgccagcgc tccccgggca gagaatggtg ctgcactaaa ctcgccgttc ggtgggttct
      181 ggaccgacca ggcaaacgcg cttgatctgg ttcaggcccg cctggatctg gggtggatca
      241 gacagcgcga ggccgcgatg ctgcgaatat ttgcactgga tgggattgtc gatttcgatc
      301 gcctggtggg ccgcgatcag gtaaccgacg ctgcgctggt cgcggcacag gcgttcaccg
      361 gaatgtttca ggaagcgctg ttcgctcccc ccgcttcgac cgctgatcca caaccatggc
      421 gccccgaact gaccgaacaa tcagtcgcgg ccctggacct gcacatgctc tcgccgccga
      481 tccgccagct gttgctggac aatgtgctga ccgactttct cgcgcttatt ttcggagcac
      541 cgcccagact gatcgaaagc cgtgcgtttc tgcgtgaggc cgcgccgccg gaccgcgacg
      601 tggcgtggca cgcctgttcg ctgccattgc agatggtggc cgtgaccgtc ccactggagg
      661 acagccagga gggccccgca tcggcatggc ctggcagtca ccgtttgccc gacctgctgt
      721 ggtccgggga gcacgtttca ctatcggaag cacgccgcgc cggtgtacgg gatttctcgc
      781 aagccgtggc gcagcgtgag gatcgggtcc gcggcttact tcatggacag gaacctcgcc
      841 gactggatgc ggtcgccgga cggagaacaa tccggcatgc caacctgatc cacgaggtta
      901 atccgccgcg gccaccgttg cagcgccgaa cactgacggc atggtattgc ccgtcctacg
      961 tcgtgccttg ctatttggag acgacgcagg cccggctcca tatccaggat ggcgtgggat
     1021 tttcttccgg cgtttatcct gcatcagatc cgcgcgactg aatgcaacgc gtcgttttct
     1081 ccgccgacga ttttggcctg acaccagcgg tgaatgaagc cgttgaacgg gcccatcgtg
     1141 acggcattct ggaccaggcc agcctgatgg tcgctggcca ggcagccgac gacgccattc
     1201 gctgtgcacg tgccctgcca tcgttacgag tcggcctgca cctggtggtg atcgagggac
     1261 ccgcggtatt gccgccgtgc gaaattcccg atttggtgga tgcgtccgga cagtttccct
     1321 cggaccaggc gcggctggga ttccggtatt tcttccgtcc ctcggtgcgg cggcaattgg
     1381 cgaaggaaat ccgcgcgcag ttcgcaacgt tcgccgcaac cggactgacg ttggatcatg
     1441 ccaatgcgca taagcatatg catttgcatc ccatcgtggg aaagttgctc atcgagatcg
     1501 ggcgcgaatt cggtttgcac tcgatacgca ttcctgccga accgccagca actctcgccc
     1561 tcaccggcac ctgggctggc attg
//
LOCUS       DATAVD010001268         4825 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1420579, whole genome shotgun sequence.
ACCESSION   DATAVD010001268 DATAVD010000000
VERSION     DATAVD010001268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4825
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1420579"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(176..1180)
                     /gene="fgd"
                     /locus_tag="VHX39_24165"
     CDS             complement(176..1180)
                     /gene="fgd"
                     /locus_tag="VHX39_24165"
                     /EC_number="1.1.98.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003619205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0006007 - glucose catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase
                     (coenzyme-F420)"
                     /protein_id="HEX3994279.1"
                     /translation="MLKLGYKASAEQFGPKPLLDFSVEAERNGFDSVFISDHFQPWKH
                     TDGHAPSVLPWLGALGAATQRIVMGTSVLTPTFRYHPSVVAQVFGTLGVMFPGRVILG
                     VGTGEGLNEVPSTGMKWPETKERFARLREALTLIRRLWTEDRLSFEGEYYRTEKATIY
                     DKPKTPLPIYVAGAGPQVAKYAGRMTDGFICTSGKAWDLYTKTLLPNVEEGLKLSSKP
                     KPNYDRMIEMKVSFDTDHARALNDTRHWAALALTPEEKVSVEDPVEMERLADALPIER
                     AASRWIVSNDPDEPIEKIKPYIEMGFRHLVFHAPGPDQVRFLKLYGEQVLPKLRQRFD
                     "
     gene            complement(1270..2013)
                     /locus_tag="VHX39_24170"
     CDS             complement(1270..2013)
                     /locus_tag="VHX39_24170"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX3994280.1"
                     /translation="MDRQTLRRNGEATLGTLFGESVQTQGLANLLTEPVFGGVWNRPG
                     LALSDRLLCTIAALATGPRMRSLRGYINAALDHGVDGAAIREILVQAALYAGFSSAEE
                     TLPLLAEILADRDIPFPDDPPEDVALEELTARGADLMHTLHGDRARLGYAAPGNPVTG
                     ALYPTAIQYGYGEIWFRPGLERRQRALVAVAGFTALRLPEQVGKFGQSALNVGLSKTE
                     VVEAVIQTAPYTGFPPALNALGALSAAFA"
     gene            2144..2623
                     /locus_tag="VHX39_24175"
     CDS             2144..2623
                     /locus_tag="VHX39_24175"
                     /inference="COORDINATES: protein motif:HMM:NF021621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host attachment protein"
                     /protein_id="HEX3994281.1"
                     /translation="MRAAAGLKIEKRVIAVIGIPGLFFVIACKNQARFVRPDQDNGLH
                     TVLAANFTTLGKHAVAPADPLDPPDWQQIAFARLLAMRISEDFAVDLFSHLALVAPPH
                     LLHELTTMIDAPTSAILVGSLAKDLVWVPDLELWPHLLPWIQPGQIGWASPVPSHEW"
     gene            2777..3238
                     /locus_tag="VHX39_24180"
     CDS             2777..3238
                     /locus_tag="VHX39_24180"
                     /inference="COORDINATES: protein motif:HMM:NF021621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host attachment protein"
                     /protein_id="HEX3994282.1"
                     /translation="MPQHHSLCFVIADGGHARFVRPASDNALHTLEAVDSVTLHKHDR
                     DLVSDRPGRAFESSTVARHAYTPRTDPHEMAKDQFTREVARMVNETSAADEFHELVIV
                     APAHVLAELTDALDARTRAKLLGTLAKDLVNTPDHELWSHLKEWVRPVHRA"
     gene            complement(3239..4540)
                     /locus_tag="VHX39_24185"
     CDS             complement(3239..4540)
                     /locus_tag="VHX39_24185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX3994283.1"
                     /translation="MNLYSLLQKRLADGRPVRVGLIGAGKFGSMFLTQVPTTPGLQVA
                     AIADLAPDRARAACRTVGWPDDLIAATRFTDDAMAMIASPDVEVVIEATGHAPAGIAH
                     ARRAIREGKHIVMVNVEADVLAGPLLAREAAQAGVVYSLAYGDQPALICELVDWARAC
                     GFKVIAAGKGTKYLPEYHASTPDTVWGYYGLTPDQARIGGMNPQMFNSFLDGTKSAIE
                     MAAVANATGLTPAPDGLAFPPCGTHELADVLRPGNAGALHHAAQVEVISSLHRNGDAV
                     RNDLRWGVFVAFEAPNDYAARCFQEYGVVTDPSGRTTALYRPFHLIGLELNVSILSAA
                     LRGEATGAPTGFRGDVVCTAKRDLRAGEILDGEGGACVWGKLMPAADSLRLGGLPIGL
                     ANKVPLTRDVPRAAPITWADIRTDETDPATRYRRAMEAAFA"
     gene            4708..>4825
                     /locus_tag="VHX39_24190"
     CDS             4708..>4825
                     /locus_tag="VHX39_24190"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HEX3994284.1"
                     /translation="METEWRKLRTDQLRDLATRDAIVILPVASLEQHGPHLPV"
BASE COUNT          901 a         1503 c         1525 g          896 t
ORIGIN      
        1 tcgagacgat cttttgcgcg atcacgacga cgtcgccgtc acgcaacgcc agcccagagg
       61 tcaccgcggc gtcggcgatc atggacgaaa ggtcgtctcc ggtttgcacc atcggcagac
      121 cggggatcgc gaagatttcc aggtgagcgc tcattgtgcc gtcagtggca ccagttcagt
      181 cgaagcgctg gcgcagcttc ggcagcacct gctcgccata gagtttcagg aacctcacct
      241 ggtccgggcc gggcgcgtgg aacaccagat gccgaaaacc catctcgata tatggtttga
      301 ttttctcgat aggctcgtcc gggtcgttgg aaacgatcca gcggctggcg gcacgttcga
      361 tcggcaacgc gtcggccagg cgttccatct ctaccgggtc ctcgaccgag actttttcct
      421 ccggagtcaa cgccaacgcg gcccaatggc gggtatcgtt caacgcgcgg gcatgatcgg
      481 tatcgaagga gactttcatc tcgatcatcc ggtcgtaatt gggcttcggc ttgctggaca
      541 gtttcagacc ttcctcgaca ttcggcagca gagtcttggt gtaaagatcc cacgccttgc
      601 cgctggtgca aatgaaacca tcggtcatgc ggccggcata tttggcgacc tgaggcccag
      661 cgccggcgac gtaaatgggc agcggggtct tcggcttgtc ataaatcgtg gctttctccg
      721 tgcggtaata ttcgccttcg aagctcagcc ggtcctcggt ccaaaggcgg cggatcaggg
      781 tcagcgcttc gcgcaggcgg gcaaagcgtt ctttggtttc cggccatttc atgccggtcg
      841 agggcacctc attcagccct tcccctgtcc ccacgcccaa aatcacccgg cctgggaaca
      901 tcacccccaa tgtcccaaac acctgggcga caaccgaggg atggtagcgg aatgtcggcg
      961 tcagcacgct ggtgcccatg acgatccgtt gcgtggcagc acccagtgcg ccgagccacg
     1021 gcagcacgga aggcgcgtgc ccgtcggtgt gcttccacgg ttggaaatgg tcgctgatga
     1081 atacggagtc aaaaccattg cgctcggcct cgaccgagaa gtccagcagc ggctttggac
     1141 caaactgctc cgcggacgct ttgtagccga gtttcagcat aacggtctcc ttatcccatc
     1201 tcagtcggcg cccacgctac cgtcccggcc actcgtgagc aatcgggggc ctgggcaatc
     1261 gggggcgcgt caggcgaatg ccgcactcag cgccccaagg gcattcagcg caggcggaaa
     1321 tccggtatac ggcgcggttt ggatgacggc ttcgacgacc tcggtcttcg acaggccgac
     1381 attcagtgcc gattggccaa atttaccgac ctgttccggc aggcgcagcg cagtgaaccc
     1441 ggcaaccgcg accagagcgc gttggcggcg ttccagaccg ggccggaacc agatctcacc
     1501 gtagccatat tggattgccg tcggatacag cgcgccggtc accggattgc cgggcgcggc
     1561 atagcccagc cgcgcacggt cgccgtgcag cgtgtgcatc aggtcggcgc cacgagcggt
     1621 aagttcttca agcgcaacgt cctcgggcgg atcgtcgggg aacggaatgt cgcgatcggc
     1681 caggatctcc gccagcagcg gcaaggtttc ctcggcgctg gagaaccccg catacagcgc
     1741 cgcctgcacc aggatttcgc ggatcgccgc cccgtccacg ccgtggtcga gtgcggcgtt
     1801 gatataaccc cgcaacgaac gcatcctggg accggtggcc aaagcggcaa tcgtgcaaag
     1861 cagccggtcg ctcagcgcga ggccgggccg gttccaaacc ccaccaaata ccggctcggt
     1921 cagcaaattc gccaggccct gagtctgcac gctctcgcca aacagggtgc ctaacgtggc
     1981 ctcgccgttc cggcgcaagg tctggcggtc catggtcgat cctccgtcgt ggtgggtcct
     2041 acactgatcg tcggttcctg ccgcaaagtc cattgcttcg gtctgctgtt tgatttgggt
     2101 ccatcacgca ccgtttgatc aggatcaatg ctgtacctcg ttggtgcgcg cagcagccgg
     2161 tctgaagatt gaaaaaaggg tcatcgccgt gataggcatc ccagggctct tcttcgtcat
     2221 tgcctgcaaa aatcaggcac gctttgtgcg gccggaccag gataatggcc tgcacacggt
     2281 ccttgctgcg aatttcacga cccttggtaa acacgctgtt gctccggctg acccgctcga
     2341 tccgccggac tggcaacaaa ttgccttcgc acggctgtta gccatgcgaa tcagtgagga
     2401 ttttgcagtg gatttgttct cccacctggc tttggtggca ccaccgcacc tgctgcatga
     2461 actgacgacc atgatcgatg cacccaccag tgccatcctg gtcgggagtt tggcgaagga
     2521 tcttgtgtgg gttccggacc tcgaactgtg gccccacctg ttaccgtgga tccaaccagg
     2581 ccaaattggc tgggcctcgc cagtgccttc gcacgagtgg taatgacgga tgccaggcgg
     2641 cactgctgcc ggatccaggc tccggatcaa aaaatcagcg gcgtttcggt agaagtccgc
     2701 aaccatttga ccgagatcaa cgccgcgttc cgccgcctgg ttaatgatgc gaccgacatc
     2761 aagaggagac ggctccatgc cccagcacca cagtctttgc tttgtcattg cagatggcgg
     2821 ccacgcccgg ttcgttcggc cggcatccga caacgctttg cacacactcg aagccgtcga
     2881 ctcggtaacc ctgcacaaac acgaccgtga tctcgtctcg gaccgccctg ggcgtgcgtt
     2941 cgaaagtagt accgtcgcac ggcacgccta tacgccgagg actgatccgc atgagatggc
     3001 caaggatcag ttcacccgcg aggttgcgag aatggtcaac gaaacctccg ccgcggatga
     3061 gtttcacgaa ctggttatcg ttgcgccagc gcatgtattg gctgaactaa ccgacgccct
     3121 tgatgcgcgt accagggcga agctgctcgg gacactggcg aaggatctgg tgaacacgcc
     3181 cgaccatgaa ttgtggtcgc acctgaaaga gtgggtcagg ccggtgcacc gcgcgtaatc
     3241 aggcgaacgc agcctccatg gcacggcggt agcgtgtcgc cgggtcggtc tcgtcggtgc
     3301 gaatgtcggc ccaggtgatg ggggcggcac gggggacgtc gcgagtgagg gggactttgt
     3361 tggcgaggcc gatcggcaga ccgcccagac gtaaactgtc ggctgccggc atcagcttgc
     3421 cccagacaca ggcgccgccc tcgccgtcaa ggatttcgcc cgcgcgcaga tctcgtttcg
     3481 ctgtgcagac gacatcgccg cggaagccgg tgggcgcgcc ggtggcctcg ccacgcagag
     3541 cggccgacag gatggagacg ttcagttcca gaccgatcag atggaacggg cgatacaggg
     3601 cggtggtccg gccggatggg tcggtcacca cgccatattc ctggaagcag cgggcggcat
     3661 aatcgttcgg cgcctcgaat gcgacaaaga cgccccagcg gagatcgttc cgcacagcat
     3721 cgccattgcg atgcaggctg gaaatcacct cgacctgagc tgcgtgatgc agagcgccgg
     3781 cgttgccagg ccgcagcaca tcggcgagtt cgtgagttcc gcaaggagga aacgccagcc
     3841 cgtccggtgc cggcgtcagc ccggtcgcat tggcaacggc cgccatttcg attgccgatt
     3901 tggtgccatc gaggaacgag ttaaacattt gcgggttcat gccgccgatg cgggcctggt
     3961 ccggagtcag tccgtaatag ccccagacgg tatcaggcgt ggatgcatgg tattccggca
     4021 aatacttcgt gcccttgccg gcggcgatca ccttgaaccc acaggcccgc gcccaatcga
     4081 ccagttcgca gatcagcgcc ggctgatcgc cataggccag cgagtaaacg acgcccgcct
     4141 gtgctgcctc gcgcgcgagc aatgggccgg ccagcacgtc ggcttcgacg ttgaccatga
     4201 cgatgtgttt gccttcgcgg atggcacggc gggcatgcgc gataccggcg ggcgcgtggc
     4261 cggtggcttc gatgacgacc tccacgtcgg ggctggcaat catcgccatg gcatcgtcgg
     4321 tgaaccgcgt ggccgcgatc aggtcgtcgg gccaacccac ggtgcggcag gcggcgcggg
     4381 ctcgatcggg ggcaagatcg gcgatcgcgg cgacctgcaa ccccggagtg gtgggcacct
     4441 gagtcaggaa catggagccg aacttgccgg cgccgatcag tccgacgcga accgggcgac
     4501 catcagcgag acgcttctgc agcaggctgt acaggttcat tgggtttgct ctcattgtcg
     4561 tggccgggct tgacccggcg atccatcgcg gcactgtgcc ggtatcgatg gcagggtcaa
     4621 cgtctgcccc tgtgaaggca ggggcctgcc cctgcgaagg cgggggcgac cctgcgagga
     4681 cgtatcgcat cggaggcaaa tgcagtggtg gaaaccgaat ggcgcaaatt gcgtaccgac
     4741 caattgcggg acctggcgac gcgcgacgcg attgtgatcc tgccggtggc gtcgctggag
     4801 cagcatggcc cgcatctgcc ggtcg
//
LOCUS       DATAVD010001269         2197 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1610992, whole genome shotgun sequence.
ACCESSION   DATAVD010001269 DATAVD010000000
VERSION     DATAVD010001269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2197
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1610992"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..765
                     /locus_tag="VHX39_24195"
     CDS             <1..765
                     /locus_tag="VHX39_24195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III-family protein"
                     /protein_id="HEX3994285.1"
                     /translation="EETSALVDLVLTQAGRGSRAPSALNEGGFQRLQAGRTVLIVDAG
                     APPPPDVDRLAHAGTLSMELSVGRDRMIVNVSSFPAGGPQWFDAARATAAHSTLVIGD
                     LNSSELLEHGLGRRPSVVTVQRQEANGAHWLEATHDGWVRPFGATHRRRLYLSESGED
                     IRGEDVIEAESPQPFTLRFHLHPSVQASLQQDGAAVLMRLRSGGGWILRADAAPLTLE
                     ESIYLGSGELRKTEQVVLTGREGGSQHVKWAIHKVG"
     gene            complement(1258..>2197)
                     /locus_tag="VHX39_24200"
     CDS             complement(1258..>2197)
                     /locus_tag="VHX39_24200"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3994286.1"
                     /translation="ATSWAWPYCAAMSGSALIMPGRWLDGANVLRTLNEERITFSGGV
                     PTIWLDVLNQLRAGGGALTALKRLMVAGSACPRVLVEGFGAYGVDVYQAWGMTECSPI
                     VTHHVPMPATVDLDAEAATRLRLKQGRPIYGADIKIVDESGKELPHDGVAFGDLVTRG
                     PWICREYLHRGAEGAADKDGWFATGDVATIDPNGYVELVDRSKDVIKSGGEWISSIAL
                     ENIAVSHPDVAEAAVINAKHERWQERPLLLVVPRDGRTVDVDGLMKLYDGAVAKWWLP
                     DAVVVVDELPHGATGKLNKLALRQKYQDYLLQGGVP"
BASE COUNT          402 a          703 c          687 g          405 t
ORIGIN      
        1 gaggaaacca gcgctctggt ggatctcgtg ctgacccagg cgggccgcgg cagccgcgct
       61 ccttcggcgt tgaacgaggg tggatttcag cggctgcagg ccggtcggac cgtgctgatc
      121 gtcgatgccg gcgcaccacc gccaccggat gtcgaccgcc tcgctcatgc cggaacgctg
      181 tcgatggagc tgtcggtcgg ccgcgaccgg atgatcgtca atgttagctc gttcccggcc
      241 ggtgggccgc aatggttcga tgccgctcgg gcaaccgcgg cgcactcgac cctggtgatc
      301 ggcgatctga acagcagcga gttgctcgag cacgggcttg gccgccggcc gtctgtagtc
      361 accgtgcagc gccaggaagc caatggcgca cactggctgg aagccactca cgacggatgg
      421 gtcagaccgt tcggtgccac ccatcgacgg cgtttgtatt tgtcggagag tggcgaggat
      481 attcgcgggg aggatgtgat cgaggccgag tcgccccagc cgttcacgct gcggttccat
      541 ttgcatccct cggttcaggc cagtctgcaa caggatggtg ccgcggtgtt gatgcggctg
      601 cgctctggag gaggctggat cctacgcgcc gacgccgccc ccctcaccct cgaagagagc
      661 atttacctgg gctcgggcga gttgcgcaaa accgaacagg tggtgctgac cggccgcgag
      721 ggcgggtctc agcatgtgaa atgggcgatc cataaagtgg ggtgagggga tttgccgagt
      781 accggccagg ctcgcaccgt cccggcgggc ttgacccgga aatcgcaggc ctgcctggct
      841 caacgggttc acgggcaggt gcacctgagc gaaattcacg ccctcagcga aatccacgcc
      901 ctgagcgaaa tccatgtatg gacatcgacc gaaccattgt gtggggtgac aggcgatcct
      961 gccgagccgg gcaaccgcaa cggcatcggc gcctccggca atattgatga agcggctgac
     1021 ccggtcgggg gcggatcctg aacaccgtgg atatcggatg gtaacggggc cggcaggcgc
     1081 ggatgataga tcgcctgcgg tgcaatcatc gtcaccagat gcgtcaggta actggccgaa
     1141 atgcccatgg ggatgttttc cgtgcgcaga gagcggaatt cttccacatg gcgtgcggcc
     1201 ggctgcacag ccgcgttgac atggtatagc ctggttggtc gcaatctggt taccggatta
     1261 cggtacgccg ccctgcaaca ggtaatcctg atatttctgc cgcaacgcca gcttgttcaa
     1321 cttcccggtc gcgccatgcg gcagttcatc gaccaccacg acggcatccg gcagccacca
     1381 tttggctacc gcaccgtcgt agagtttcat cagcccatct acatccacgg ttcgtccatc
     1441 gcgcggcacg accagcagca atggccgttc ctgccaccgt tcatgtttcg cattgatcac
     1501 cgcagcctcg gcgacatccg gatgcgacac cgcaatgttc tccagcgcga tcgagctgat
     1561 ccattcaccg ccggacttga tcacgtcctt cgaccggtcg accagttcga catagccgtt
     1621 gggatcgatc gttgcgacat cgccggtggc gaaccagccg tccttatcgg ccgcgccctc
     1681 agcgccgcga tgcagatatt cgcggcaaat ccacggaccg cgggtcacca gatcgccgaa
     1741 tgccacccca tcgtgcggta gctccttgcc gctttcatcg acgattttga tgtcggcgcc
     1801 gtagatcggc cggccttgct tcaatcgcag ccgggttgct gcctcggcat cgaggtcgac
     1861 agtggcgggc atcggcacat gatgggtcac gatcgggctg cattcggtca tgccccacgc
     1921 ctgatagacg tccacgccat aggcaccaaa cccctccacc agcacccggg ggcacgccga
     1981 accggcaacc atcaaacgtt ttaacgccgt gagggcgcca ccgccggcgc gtagctggtt
     2041 caatacgtcc agccagatgg tcggcacgcc gccagagaaa gtgatgcgtt cctcgttcag
     2101 ggttcgcaac acattcgcac cgtcgagcca gcgtcccggc atgatcagcg cggatccgct
     2161 catggctgcg caatatggcc acgcccaact ggtggca
//
LOCUS       DATAVD010001270         2949 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_493216, whole genome shotgun sequence.
ACCESSION   DATAVD010001270 DATAVD010000000
VERSION     DATAVD010001270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2949
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_493216"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1323
                     /locus_tag="VHX39_24205"
     CDS             <1..1323
                     /locus_tag="VHX39_24205"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994287.1"
                     /translation="NHSQQGPAMRILRPLRGRSMALLWGGLSFSAIGDQLYAVALTWI
                     AVGVLGSNAGYLSALQAFIALLAVLFIGIWADRWEQLRGMIASDLASAAVLVGVVVAA
                     LVSGKPSVTGLIVAIVVLAAGQAVFRPALQSVLPTVVEDTHLLPAANGLLDATSRIAR
                     LLGPGLVALLVSAVPVIHFLTIDALTFLASAAALLLIRRGRPAGVAAPYGSTRDSVWN
                     GIIRGYRATSRHSLLGYYLMVSGPLNGVWYAMFYLCLPLMITRTGLGSSGGPTGLGAY
                     GLILSAYGCGNLAATVFLGGRALPARPQFQMLYGNIHFGCGALLLASANLLPVEWRLT
                     GFAAAAALTAMGGPMQDIPTAVLRQTRIAAPDRPAAMRAYMAAVALGILVAMLLTPMA
                     ITVFGVTRIIVAGAVVYLTVAVVGLVRLAGWRDADPEPVGKPEAAAIS"
     gene            complement(1313..1537)
                     /gene="rpmE"
                     /locus_tag="VHX39_24210"
     CDS             complement(1313..1537)
                     /gene="rpmE"
                     /locus_tag="VHX39_24210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007281980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HEX3994288.1"
                     /translation="MKSGIHPEYHEINVVMTDGSTFKTRSCYGKEGDTLRLDIDPKSH
                     PAWTGIQRIMDTGGQVAKFNKRFAGLGIKI"
     gene            complement(1624..>2949)
                     /locus_tag="VHX39_24215"
     CDS             complement(1624..>2949)
                     /locus_tag="VHX39_24215"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF012946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3994289.1"
                     /translation="DIMFDTRVTEARFDETTSQWSVTTDHGERFAAGFLIMATGCLST
                     ARVPDFKGLATFAGKTYHTGAWPHEGVDFTGMRVGIIGTGSSAIQAIPVIAEQAAELT
                     VFQRTPNFSIPSRNGPLGDSYERQWKDHYADRRAEARDTRNGILAYPNDFSALSVSAE
                     ERQRIYEERWASGGTTFMAAFNDLIFSQAANDTAAEFVRGKIREIVKDKRTAELLAPK
                     DHPIGTKRICVDTRYFETYNRPNVHLVDVRSAPIKAITPTGLRTQAADYEFDAIVFAT
                     GFDAMTGALTAIDIHSTDGSTLKQEWQDGPHTYLGLMCAHFPNMFMVTGPGSPSVLSN
                     MHVSIEQDVNWITDCLGWLRANQIVRIEATQEAQDNWVLHGIEVANKTLYPKAASWYM
                     GANIEGKPRVFMPYIGGVNAYREKCAEIADQGYTGFRLSGGAKVAQAAE"
BASE COUNT          449 a          876 c          975 g          649 t
ORIGIN      
        1 aatcattcgc aacaagggcc ggcgatgcgc attctccgtc cgttacgtgg ccgatcgatg
       61 gcgctgcttt ggggcggcct gtcgttttcc gccattggag accagctcta cgccgtcgca
      121 ctgacctgga tcgcggtcgg ggtgttgggt tccaatgccg gatatctgag cgcgttgcag
      181 gcattcatcg ccctgttggc ggtgctcttc atcggcatct gggctgaccg gtgggagcag
      241 ttgcgcggca tgattgccag cgatctcgcc tcggccgcgg tgctggtggg cgtggttgtt
      301 gccgcgctgg tctcaggcaa gcccagtgtg acgggactga ttgttgccat cgtggtgctg
      361 gcggcaggcc aggccgtgtt ccggccagcg ctgcaatcgg tgttgccgac cgtggtcgag
      421 gacacgcatt tgttgccggc cgccaacgga ttgttggacg caaccagtcg gatcgcgcga
      481 ctgctaggcc caggattggt ggcgctgctg gtgagtgcgg tgccggtcat ccattttctg
      541 acaatcgatg cgttgacgtt tctggcatcg gccgccgcct tgttgctgat ccggcgtggt
      601 cggcctgcag gggtcgccgc cccgtacgga agcacccggg attcagtctg gaacggcatc
      661 attcgcggtt atcgcgcaac gtcacggcat tcgttgcttg gctattatct gatggtgtcc
      721 gggccgttga atggcgtctg gtacgcgatg ttttacttgt gtctgccgct gatgatcacg
      781 cgcaccggcc tcggttcctc cggcggtccg accggactgg gcgcctacgg cttgatcctg
      841 tcagcctatg gttgcggcaa tctggcggcg accgtgttcc tcggtggacg ggctttgccg
      901 gcacggccac aattccagat gctctatggc aatattcatt tcggttgcgg ggccttgctg
      961 ctggcctcgg cgaacctgct gccggtcgaa tggcggttga cgggcttcgc ggctgctgct
     1021 gcgctcaccg ccatgggcgg gccgatgcag gacattccga cggccgtgct gcgccaaacc
     1081 cggatcgcgg cacccgaccg gccggcggcg atgcgtgctt atatggccgc ggtcgctctg
     1141 ggtattctgg tcgcaatgct gctgacgcca atggcgatca ccgtcttcgg tgtcacgcgg
     1201 atcatcgtcg ccggcgctgt ggtttacctg accgtggcgg tggttggtct cgttcgtctc
     1261 gccggctggc gagacgctga cccggagccc gtaggcaaac cggaggctgc ggctatatct
     1321 tgatgcccaa cccggcgaag cgcttgttga acttcgccac ctggccgccg gtgtccatga
     1381 tccgctggat gccggtccag gcaggatgcg acttcgggtc gatatccagc cgcagggtgt
     1441 cgccttcttt gccatagcag gaacgggtct tgaacgtgga gccgtccgtc atgacgacgt
     1501 tgatctcgtg gtattcgggg tggatgccgg atttcatggc gatcgtcctt actggcggcg
     1561 cgaagccgcg gtgtgtagcg ggcagcggcc gaggaagcaa gcgtcgggcg cgcgcgttgc
     1621 caatcactcc gcagcctggg ctaccttcgc tcccccgctc agtcggaagc cggtataacc
     1681 ctggtccgcg atctcggcgc atttttcgcg ataggcgttg acgccaccaa tatagggcat
     1741 gaacacccga ggtttcccct cgatattggc gcccatgtac caggatgccg ccttcggata
     1801 gagagttttg ttcgcgacct cgatcccgtg cagcacccag ttatcctggg cttcctgcgt
     1861 cgcctcgatc cggacgatct ggttggcgcg cagccagccg aggcaatcgg tgatccaatt
     1921 gacatcctgt tcgatcgaca cgtgcatgtt gctcagcacc gaggggctgc ccggcccggt
     1981 taccatgaac atgttaggga agtgcgcaca catcaggccg agataggtgt gcggtccgtc
     2041 ctgccattct tgtttcaggg tcgaaccgtc ggtggagtga atgtcgatcg cggtcagcgc
     2101 gccggtcatc gcatcgaacc cggtggcgaa cacgatggcg tcgaactcgt aatcggcggc
     2161 ctgtgtgcgc aacccggtgg gcgtgatcgc cttgatcggc gcactgcgga cgtcaaccag
     2221 gtggacgttc ggccggttat aggtctcgaa atagcgggta tcgacgcaga tccgtttggt
     2281 gccgatcgga tgatctttgg gcgccagcag ctcggctgtc cgcttgtctt tgacgatctc
     2341 gcgaattttg ccgcgcacga actcggcggc ggtgtcgttg gcggcctggc tgaagatcag
     2401 gtcgttgaac gccgccatga aggttgttcc gccggatgcc caacgctcct catagatgcg
     2461 ctgacgttcc tcggcggaga cggacaatgc agaaaaatcg ttcggataag ccaggatgcc
     2521 gttgcgggtg tcgcgggctt cggctcgccg gtcggcgtaa tgatctttcc actgccgctc
     2581 gtaactgtcc cccagtggac cgttgcgtga ggggatggag aaattcggcg tgcgctgaaa
     2641 cacggtcagc tcggcggctt gctcggcaat caccggtatg gcctggatcg ccgatgatcc
     2701 cgttccgatg atgcccaccc gcattccggt gaaatccacg ccttcatgcg gccaggcgcc
     2761 ggtgtggtaa gtcttgccgg cgaacgttgc caaccccttg aaatccggca cgcgagcggt
     2821 cgacaggcag ccggtggcca tgatcaggaa gccggcagcg aaccgttcgc cgtgatcggt
     2881 ggtgaccgac cattggctcg tggtctcgtc gaacctggcc tcggtgaccc gcgtgtcgaa
     2941 cataatgtc
//
LOCUS       DATAVD010001271         1834 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3659218, whole genome shotgun sequence.
ACCESSION   DATAVD010001271 DATAVD010000000
VERSION     DATAVD010001271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1834
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3659218"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..203)
                     /locus_tag="VHX39_24220"
     CDS             complement(<1..203)
                     /locus_tag="VHX39_24220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter periplasmic adaptor subunit"
                     /protein_id="HEX3994290.1"
                     /translation="MRNVLLLVLLLAAMPAWAQAPGPPAVGVVTVEPATITETSEFVG
                     RVQAIQRVALNARVTAFLEERLFT"
     gene            complement(203..661)
                     /locus_tag="VHX39_24225"
     CDS             complement(203..661)
                     /locus_tag="VHX39_24225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX3994291.1"
                     /translation="MVSGLYYEEFSIGQEFDHPWTRTVTEMDNVLFTTMTMNVQPLHL
                     DADFAAKTEFGKPLVNSIFTLGLMVGVSVNDTTIGTTVGNLGFSDVRFPKPVFAGDTL
                     RSRTKVLTMRESRSRPDVGIVEFEHTCWNQRGEMVAICRRQAMMRKKPKA"
     gene            complement(760..>1834)
                     /locus_tag="VHX39_24230"
     CDS             complement(760..>1834)
                     /locus_tag="VHX39_24230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /protein_id="HEX3994292.1"
                     /translation="ASSLALDTAPVTWPVGQAATFVGTYDVRHRTMNLTTELTQSDPR
                     MQTFGEEIDLVRAALPEFDQESFNAGHLTPVYFGSAIKGIGVADLLDGLAEYGPPPRA
                     QPADKRVVEATEPGLTALVFKIQANMDPQHRDRIAFARVCSGRLVRGMRLKQVRTGKQ
                     IPLHAPQFFFAREREIADEAFAGDVVGIPNHGTLRIGDTLTEGEDITFTGVPYFAPEI
                     LRRVRLDDAMKAKKLRQALVELAEEGVVQLFRPRDGAAPLVGVVGVLQLDVLKARLAA
                     EYGVGIGFEQSTYSLARWIASDDRAALSKFMDENRSAICDDVDGDPVFLATSAFMMRR
                     AEELATRLTFRDIKDVRVETLTV"
BASE COUNT          339 a          573 c          589 g          333 t
ORIGIN      
        1 gtgaacaagc gttcctccag gaacgcggta acgcgggcat tcaacgcgac ccgttggatc
       61 gcctgcacgc ggccaacgaa ttcggacgtt tccgtaatgg tcgccggctc gacggttacg
      121 acgccaacgg caggcgggcc aggtgcttgc gcccaggctg gcatcgccgc gagcagaagg
      181 accaaaagga ggacattgcg catcacgctt tgggcttttt gcgcatcatc gcctggcggc
      241 ggcagatcgc gaccatctcg ccacgctggt tccagcatgt gtgctcgaac tcgacgatgc
      301 cgacatcagg ccgggagcgg ctttcgcgca tggtcaacac cttggtgcgg gagcggagcg
      361 tgtcgccggc aaataccggc ttggggaagc ggacgtcgga aaaaccgaga ttgccgacgg
      421 ttgtgccgat cgtcgtgtca ttgaccgata cgccgaccat gaggccaagc gtaaagatgg
      481 agttgaccag tggtttgcca aactcggttt tggcagcgaa gtcggcgtcg aggtgcagcg
      541 gctgcacgtt catcgtcatg gtcgtgaaca agacgttgtc catttccgtg acggtgcgcg
      601 tccacggatg gtcgaattcc tgaccgatcg aaaattcctc gtagtacagc ccagacacca
      661 tgaacccccg tgatgatgat ccggcccggt ttgctcgggc tctacctcgt gacaatctgc
      721 aaaccgcatg gtccggtcaa gctaaccgtt gcaggctgcc tacacggtga gcgtttccac
      781 tcgcacgtct ttgatatcgc ggaaagtcag ccgggttgcc agttcctcag cccgtcgcat
      841 catgaaggcc gacgtcgcca ggaacacggg atcgccgtcg acgtcgtcgc agatcgcgct
      901 gcggttttca tccatgaact ttgacagcgc agcgcggtcg tccgaagcaa tccaacgggc
      961 gaggctgtaa gtcgattgct cgaacccgat cccgacgccg tattctgcgg cgaggcgggc
     1021 tttcagcacg tccagctgca gcacgccgac caccccgacc aacggagccg caccatcgcg
     1081 cgggcggaac aattgcacga cgccttcctc ggccagttcc accagggcct ggcgcagctt
     1141 cttggctttc atcgcatcgt ccaggcggac ccggcggagg atttccggcg cgaaatacgg
     1201 cacgccggtg aaggtgatgt cctcgccctc ggtcagcgtg tcgccaatgc ggagcgtgcc
     1261 gtggttgggg atgccgacga cgtcgccggc aaacgcctca tcggcgatct cgcgctcgcg
     1321 ggcgaagaag aattgcggtg catgcaacgg gatttgcttg ccggtgcgca cctgcttcag
     1381 ccgcatgccg cgcaccaacc ggccggagca gacccgggca aaggcgatcc ggtcgcgatg
     1441 ctgcgggtcc atgttggcct ggatcttgaa caccagagcg gtcaggccgg gttcggtggc
     1501 ctcgaccacg cgcttgtcgg ccggttgcgc gcgcggtggc ggtccatact cggccagccc
     1561 gtcgagcagg tccgccacgc caataccctt gatcgcgctg ccgaaataga ccggcgtcag
     1621 gtggcctgca ttgaaggact cctgatcgaa ttccggcaaa gccgcgcgca ccagatcgat
     1681 ttcttccccg aacgtctgca tccgagggtc agactgcgtc agctcggtgg tgaggttcat
     1741 ggtccgatgc cgaacatcgt aggtgccgac gaaggtcgcg gcctggccga cgggccaggt
     1801 gaccggcgcg gtgtccagcg ccagcgacga ggcg
//
LOCUS       DATAVD010001272         3007 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3470721, whole genome shotgun sequence.
ACCESSION   DATAVD010001272 DATAVD010000000
VERSION     DATAVD010001272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3007
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3470721"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1217)
                     /gene="bamA"
                     /locus_tag="VHX39_24235"
     CDS             complement(<1..1217)
                     /gene="bamA"
                     /locus_tag="VHX39_24235"
                     /inference="COORDINATES: protein motif:HMM:TIGR03303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEX3994293.1"
                     /translation="MQLRSVTRHLAACLLMICVTAAATAQPSVAPPPAAPPASGPLPS
                     APGPSAPGPSATAPASAPASAPLPIPHPVPLPALAGGAIQAIQVVGNERIEAGTIRSY
                     LVVRPGDPFDPDRLDRSVKTLFSTGLFKNVQLSRQGNVLIVNVEENPLVNKVAIEGNK
                     RLSDDQIKPEIQTKPRAVFTPAMVEADRQKILDLYVKKGNFDATVTPQIIRQDQNRVD
                     VVFQVAEGPTAYISKIAIVGNHAFSESKLIDAISSREERWWRFLSTSDQYDPERLQYD
                     KELLRRFYLKNGYADIDILNATAELSPDRQGFFVTFTVHEGERYHLGKVTATSQIKGI
                     TPDELLGAIDLREGDWYDGDAVGKADDAMQDYVHNRGYAFVEVRPRVKKNDTDHTIDM
                     LFDVGEGPRVYIER"
     gene            1469..2737
                     /locus_tag="VHX39_24240"
     CDS             1469..2737
                     /locus_tag="VHX39_24240"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEX3994294.1"
                     /translation="MPALLTAYIVTAIAWTLLSLWLSARQIACVRRHRDAVPADFAGN
                     VTIDEHRKAADYTVARERLAGVRTVWDLIVSLGWVLGGINLLYGVLAGVLPPSPALGV
                     AFLVASFAIGALLSLPLDLYKTFVVEQRFGFNRSTPVMFAVDRVKSWAIGLAVAVPLL
                     FACLWAMHAFSGLWWLWTWVGVVLLMLAAPTIYVRLIAPRFNKFTPLQDGELRSRIET
                     LLRRCGFRPSGLFSMDASRRSAHGNAFFIGFGKTKRVVLFDTLISASTPDEIEAVVAH
                     ELGHDKHGHVLFGLLRSAAMAFAMLAAFGWLSKQAWLLPGFGIGYQDDALALLACLLV
                     VGMVGPLLAPISNWMSRRNEFQADDFARRQVAAGPMINALLRLSRDNASTLTPDAVYA
                     LVHYSHPPVPLRIRELHAAEAREMVGAAAE"
BASE COUNT          469 a          878 c         1056 g          604 t
ORIGIN      
        1 cgttcgatgt aaacccgcgg cccctcgccc acgtcgaaca gcatatcgat cgtgtgatcg
       61 gtgtcattct tcttgaccct gggcctgacc tcgacaaacg cgtaaccgcg gttgtggaca
      121 taatcctgca tcgcgtcatc ggccttgccg acggcatcgc catcgtacca atcgccttcg
      181 cgcagatcga tcgcgcccag aagctcgtcc ggggtgatgc ccttgatctg cgaagtggcg
      241 gtcaccttgc ccagatggta gcgctcgcct tcatgcaccg tgaacgtaac aaagaaaccc
      301 tgacggtccg gtgaaagttc cgccgtggca ttgagtatgt cgatgtcggc atagccattc
      361 ttgaggtaga accggcgcag caattccttg tcgtattgca gacgctccgg gtcgtattga
      421 tccgaggtcg acagaaaccg ccaccagcgc tcctcgcggg agctgatcgc atcgatcaac
      481 ttgctctcgc tgaatgcgtg attgccgacg atggcgatct tactgatata ggcagtggga
      541 ccttcggcaa cctgaaacac gacgtcgacc cggttctgat cctgccggat gatttgcggc
      601 gtgacggtgg cgtcgaagtt gcccttcttg acgtagaggt cgaggatttt ctggcggtcg
      661 gcctcgacca ttgcgggcgt gaacacggcg cgtggcttgg tctggatttc cggcttgatc
      721 tggtcgtcgc tgagccgttt gttgccctcg atcgcaacct tgttgaccag cgggttttct
      781 tcgacgttga cgatgagcac gttgccctgg cggctgagtt ggacgttctt gaacaggccg
      841 gtggagaaca acgtcttcac gctgcgatcc agccggtcgg gatcgaacgg gtcgcctggc
      901 cggaccacca gataggagcg gatcgtcccg gcctcgatgc gctcattgcc gaccacctga
      961 atggcctgaa tcgcacctcc ggccagcgcc ggcagcggga ccggatgcgg gatcggcagc
     1021 ggggccgaag cgggtgcgga ggctggcgcg gtcgcggatg gcccgggcgc ggatggccca
     1081 ggcgcggacg ggagaggccc ggacgccggg ggagcggctg gcgggggagc gacgctcggt
     1141 tgcgcggtgg cggccgcggt gacacagatc atcaggaggc aggcggccag gtgccgcgtg
     1201 acagagcgca attgcaagcg gctgttctcc cccattcgcg agcccgacgg gccgcattct
     1261 gcggcggtgc acgacggaca gtgcgagtcg ccgccatcgg tatacaagct ggcggatcga
     1321 ggcgccagac gaccaccccc tgacgccggc atcaactttc gttcaccgcg cggtcatccg
     1381 gggtggttcg ggatcagtcc gggtctatat gatgggactg tccggcgcgg cccgattggc
     1441 gggccatccg tgatcgaggt gaccgcgaat gcctgccctg ctgaccgcct acatcgtcac
     1501 cgcgatcgcc tggactctgc tgtctctttg gctgtcggcg cgccagatcg cgtgcgtccg
     1561 ccgccatcgc gacgccgtgc cggccgactt tgccgggaat gtcacaatcg atgagcaccg
     1621 caaggcggcc gactacacag tggcgcgcga gcggctggcc ggcgtgcgaa cggtctggga
     1681 cctgatcgtg tctctgggct gggtactggg aggcatcaac ctgctgtacg gcgtgctggc
     1741 cggcgtactg ccgccatcgc cggctttggg cgtagcgttc ctggtggcga gctttgccat
     1801 cggcgcgttg ctgtcgctgc cgctggatct gtataagacc ttcgtggtgg agcaacgctt
     1861 cggcttcaat cgctcgacgc ccgtgatgtt cgcggtggac cgggtgaaga gttgggcgat
     1921 cgggctggct gtcgcagttc cgctgctgtt cgcctgcctc tgggccatgc acgcgttttc
     1981 cgggctgtgg tggctgtgga cgtgggttgg cgtcgtgctg ctgatgctgg cagcgccaac
     2041 catttacgtg cggctgatcg cgccgcggtt caacaagttc accccgttgc aggacggcga
     2101 actgcgcagc cggatcgaga cgctgctgcg ccgttgcggg ttccggccgt ccgggctgtt
     2161 cagcatggac gcatcgcggc gctcggcgca cggcaatgcg ttcttcatcg ggttcggcaa
     2221 gaccaagcgg gtggtgttgt tcgacacgct gatcagtgcc agcacgccgg atgagatcga
     2281 ggcggtggtc gcgcatgaac tcggccacga caagcatggt catgtgctgt tcgggctgct
     2341 gcgcagtgcc gcgatggcgt tcgcgatgct ggccgcgttc ggctggctga gtaagcaggc
     2401 gtggctgctg ccggggttcg ggattggcta tcaggacgac gcgttggcgt tgctggcgtg
     2461 tttgctggtt gtggggatgg tcgggcctct gttggcgccg atcagcaatt ggatgtcgcg
     2521 gcgcaacgag ttccaggcgg atgattttgc ccgcaggcag gtggcggcgg ggccgatgat
     2581 caacgcgttg ttgcggctgt cgcgggataa cgcgtcgacg ctgacacccg atgcggttta
     2641 tgcgctggtg cattattcac acccgccggt gccgttacgg atccgggagt tgcatgcggc
     2701 ggaggcgagg gagatggtgg gggcagcggc ggaataaccg cttctggcgg tgtttggcgg
     2761 tgcgccagtt cagtccaaaa gcacacggga aacgtgctgt cgtttgagaa gtgtgatcat
     2821 gcggtgccgc ccgaaaacga ttccggctga gattggctca gccgacaccc gagcggcgat
     2881 agagcgcgcc gacggccagc gtcagatcaa ggctggcgag tgtgaaggtg ccctcggtca
     2941 cggtggtgac gtcgttcggc cagccgccgt cggcatcgcg ccggagcagg tcgatactgg
     3001 tgagatc
//
LOCUS       DATAVD010001273         2967 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2352524, whole genome shotgun sequence.
ACCESSION   DATAVD010001273 DATAVD010000000
VERSION     DATAVD010001273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2967
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2352524"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            369..656
                     /locus_tag="VHX39_24245"
     CDS             369..656
                     /locus_tag="VHX39_24245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994295.1"
                     /translation="MMRLRNVAIAGVASIALAAAPIHSASAHWRGGPIFWPFALGAAL
                     VTGAAIVATAPFRALPPPAYAPAYYPPPPAYYPPPPYYPGYYAPPPGYYGR"
     gene            703..1404
                     /locus_tag="VHX39_24250"
     CDS             703..1404
                     /locus_tag="VHX39_24250"
                     /inference="COORDINATES: protein motif:HMM:NF025605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX3994296.1"
                     /translation="MLSASGVTTEVAAAEPQPARRGGRPSREQAALLGDRILDVAAEL
                     FLTEGYGATSIEAVAQRARISKRTFYHRFPDKAALFDAVLRRIIQGIRPSPDLPLFEG
                     GDIGEVLRRLARLAVHATVAPMTLALSRLMLTEAQRFPELAAIVAREGSRGDAVRQIT
                     ALLERESRAGRLAIDRPEFAAEQFLALLMTVPQRRALGLGTPMTGAELDVWADDCVNL
                     FLNGCRYWQAGKSAG"
     gene            1607..1783
                     /locus_tag="VHX39_24255"
     CDS             1607..1783
                     /locus_tag="VHX39_24255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994297.1"
                     /translation="MERNTSDLNETHALSIEELDGVVGGESIVTKVVNAVVDGINALL
                     GRGTECTSKSCVTY"
     gene            complement(1913..2494)
                     /locus_tag="VHX39_24260"
     CDS             complement(1913..2494)
                     /locus_tag="VHX39_24260"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEX3994298.1"
                     /translation="MPEDMEDHAITQTPFWYLRHGETDWNRQGLSQGNIDIPLNELGL
                     AQAREAATRLRNRGITSIVASPLSRARVTAEIVAEALGLAVTIEPDLREVSWGVHEGK
                     PLDEWFHGWISGHATPEGAESFAELRRRSISGLNRAVGQPPAVLVVAHGGVFRAIRSV
                     MKLEISGRTRNCVPMWCEPPRAPGLDWSLTIHE"
     gene            complement(2487..>2967)
                     /locus_tag="VHX39_24265"
     CDS             complement(2487..>2967)
                     /locus_tag="VHX39_24265"
                     /inference="COORDINATES: protein motif:HMM:NF024802.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutathione S-transferase C-terminal
                     domain-containing protein"
                     /protein_id="HEX3994299.1"
                     /translation="NPKSKVPTLVDDEGTVRTEFPAIAYWLARTNPFANLLPDNIDLQ
                     ARALELMDYCVATIHMQGFSRIFRAANFAPSDSDEPAVKARGTEIAEKGFAELNAALA
                     GKDYAVGPFSIADAALFYVEFWAKRVGIALPANCAAHLDRMLARPSVQRTLKAEGLA"
BASE COUNT          538 a          981 c          900 g          548 t
ORIGIN      
        1 tctgccatta ccccctgggc ctgacggcca gcccgcgcca aaaatctggc ccgcgtatcc
       61 aggtggcggg gaaaatggcg gcagcggggg cagcggcgga cggaattagg gccccaaaac
      121 tggggtgttg aggggttgaa cgatcgactg cattcgaccc ctgcaggcca tctcggacca
      181 tggccgccga acccgaaagt cgtcattcca ggcgggatca gcccctcagg ccatcccgga
      241 gagcatcatt tttggcggct ggttggttgg gattgccgtc tttctgctgc gcacaaataa
      301 cgctacgcga cagttgcgtt cagttatgcc gagtgctatt gatcgctccg ctgacatggg
      361 agttcgtcat gatgaggcta agaaatgtgg ctatcgccgg cgttgcctcg atcgcgcttg
      421 ctgccgcacc gatccattcg gcgtctgccc attggcgcgg gggcccaata ttttggccgt
      481 tcgcgcttgg agcagcgctg gtaaccggcg ccgccatcgt cgccacggcg ccgttccggg
      541 ctttaccgcc gccggcctat gcgcccgcct actatccgcc cccgccggct tattatccgc
      601 cgccgccgta ctaccccggc tactatgcgc cgcccccggg ctattacggt cgctgatctg
      661 cgccgacctg ggtaaggttg cggctttctg gatcttgttc gtgtgctgag tgcatctggt
      721 gtcacaaccg aagtcgcagc cgccgagcct caacccgctc ggcggggcgg ccgcccttcc
      781 cgcgagcagg ctgctctgct cggggatcgc attcttgatg tcgcagccga actgttcctg
      841 accgaaggct acggcgccac cagcatcgag gctgtcgcgc aacgcgccag gatttccaag
      901 cgaacattct atcatcgttt ccccgacaag gcggcgctgt tcgacgcggt cctgcgtcgg
      961 atcattcaag ggatcaggcc gtcgcccgac ctgccgctct ttgagggcgg cgacattggc
     1021 gaggtgctgc gccgacttgc gcgactggcc gtgcacgcaa ccgttgcccc gatgacgctg
     1081 gcgctcagcc gattgatgct gaccgaggcc caacggttcc ctgagcttgc cgcgatcgtc
     1141 gcacgcgaag gcagccgcgg cgacgccgtc aggcaaatca cggcgttgct ggagcgcgag
     1201 tcccgcgccg gccgacttgc gatcgaccgc ccggaattcg ctgccgagca attccttgct
     1261 ctcctgatga cagtgccaca gcgccgcgcc ctcggcctcg ggacgccgat gaccggagcc
     1321 gaactcgatg tctgggctga tgattgcgtc aacctgttcc tcaacggttg caggtattgg
     1381 caggcgggca aatccgccgg gtgaaccgca accgggcgat gcgagattga tcttgccgcg
     1441 gtgtgctgcg cggcacccat cagctgtgcc gcaaagcacc gacgcgggcc aaggaagctg
     1501 gcattgtcct tgtgtcaacg gcgatcaggg catgcagcct ggttcgggac ggagacaatc
     1561 atcaaggggg cccacaggcc gccgaccgga acaaaggaat tgtaccatgg aacgtaacac
     1621 cagcgacctg aacgagaccc atgctctgtc gatcgaggaa ctcgatggcg tcgtcggcgg
     1681 cgaaagcatc gtcacgaagg ttgtcaatgc tgtggtcgac ggcatcaacg ctctgctcgg
     1741 ccgtggcacg gaatgcactt cgaagtcctg cgtcacctac tgacggtcga ggtcaaagac
     1801 ggaacggtca cagaacgact tccgagacgc cgaacgacaa ccggcctgtc cagtagcgga
     1861 caggccgtcg gctcgtaccc cgaggcgaac gaccgttgtg tatctacaga agttactcgt
     1921 ggatcgtcag cgaccagtcc agaccagggg cgcgcggcgg ctcgcaccac atcggcacgc
     1981 aattccgcgt ccgtccgctg atctccagct tcatcaccga gcggatggcg cggaacacgc
     2041 caccgtgggc caccacgagc accgcgggcg gctgccccac cgcccggttc aacccggaaa
     2101 tggaccggcg gcgcaactcg gcaaagcttt cggccccttc cggggttgca tgcccagaaa
     2161 tccagccgtg gaaccattcg tccagcggct tgccttcatg cacaccccaa ctgacttccc
     2221 gcagatcggg ttcgattgtc accgccaggc caagcgcctc ggcaacgatt tccgccgtga
     2281 cccgcgcccg ggacagcggt gaggcgacaa tcgaggttat cccccgattg cgcagccgcg
     2341 tcgccgcctc tcgggcctgc gccagcccga gttcgttcag cggaatgtcg atattgccct
     2401 gcgacaatcc ctgccggttc caatccgtct cgccatgccg caaataccag aacggcgtct
     2461 gggttatcgc atgatcttcc atgtcttcag gcaaggcctt ccgctttcaa agtccgttgc
     2521 accgatgggc gggccagcat ccggtcgaga tgggccgcac aattcgccgg cagcgcgatg
     2581 ccgacgcgtt tggcccagaa ttcgacataa aacaacgccg catccgcaat ggaaaacggt
     2641 ccgacagcgt aatccttgcc ggcaagcgcg gcgttcagtt cggcaaaacc cttttcggcg
     2701 atttcggtgc cgcgcgcctt gaccgccggc tcgtccgagt ctgacggcgc gaagttcgcc
     2761 gcccggaaaa ttctcgaaaa tccctgcatg tggatggtcg ccacgcagta atccatcagc
     2821 tccagcgcgc gcgcctgcaa atcgatattg tccggcaaca gattggcgaa cgggttggtc
     2881 cgcgccagcc agtacgcgat cgccgggaat tcggtgcgca cggtgccttc gtcatcaacc
     2941 aatgtcggca ctttcgactt cggattg
//
LOCUS       DATAVD010001274         1622 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1237919, whole genome shotgun sequence.
ACCESSION   DATAVD010001274 DATAVD010000000
VERSION     DATAVD010001274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1237919"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..468)
                     /locus_tag="VHX39_24270"
     CDS             complement(<1..468)
                     /locus_tag="VHX39_24270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994300.1"
                     /translation="MWLTLAAAGFFGIIVLVTLLRAEKSVANGALTVITLLAVGIAVA
                     ATTRVFGPSGRAGAGEMSRLSQPLTVSLPALSCIDDLAGDIVLAACEKALFGSAENAA
                     AAVSYAASELTRLVAFGDVATANGNMTPELKTLRHAVERDRFGLIAQVLVARDN"
     gene            complement(644..835)
                     /locus_tag="VHX39_24275"
     CDS             complement(644..835)
                     /locus_tag="VHX39_24275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994301.1"
                     /translation="MKHKYNVGETVYFTASNVARPAASGTYEVIRLLPTDGDDCQYRI
                     KSSTEAFERVAKESQLDIS"
     gene            complement(1058..1426)
                     /locus_tag="VHX39_24280"
     CDS             complement(1058..1426)
                     /locus_tag="VHX39_24280"
                     /inference="COORDINATES: protein motif:HMM:NF039485.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidB family protein"
                     /protein_id="HEX3994302.1"
                     /translation="MGFLDSLENSPALKGVLGQLGAAVLPVVLGEVMGTGSTGGLNAI
                     VAKLQQAGLGDQVKSWIGTGQNLPITADQVRQVLGNDTVRQLAAKYNIPVDQISELLA
                     HQLPLAVDHASPDGKLPHNA"
BASE COUNT          312 a          519 c          488 g          303 t
ORIGIN      
        1 attgtcgcgc gcgaccagca cttgcgcgat cagcccaaaa cggtcgcgct cgacggcgtg
       61 gcgaagggtt ttcagctccg gcgtcatgtt gccgttggcg gtcgcgacgt cgccgaacgc
      121 caccagccgc gtcagctcgg aggccgcata ggagacggcg gcagccgcat tctcggccga
      181 gccgaacaat gccttctcgc acgccgccag cacgatatcg cccgccagat cgtcgatgca
      241 ggacaaggcg ggcagcgaca cggtcagagg ttgcgatagc cggctcattt cgccggctcc
      301 ggcccggccg gagggaccga agacgcgggt ggtcgcggcg accgcgatgc cgaccgcaag
      361 cagcgtgatc accgtcagcg ccccattggc gaccgatttc tcggcgcgca acagcgtgac
      421 cagcacgatg attccaaaaa atccggcagc cgccagcgtc aaccacaccg gaaacgccgg
      481 cgaacgccag atttggtcga gcgatgatgc ccaggcccag ttcatgcgcg atatccccta
      541 acgccgcata gaacgcatcc gacgaaagtg aatgtcgatt cttttgcgat cagcttgcac
      601 agactggttc ggagaaccgg gtcttttgac ggcggacggg tcgtcaggag atgtcgagct
      661 ggctttcctt ggccacccgc tcgaaggctt cggtcgaact cttgatccga tactggcagt
      721 catcgccatc ggtcggcagc aggcggatca cctcataggt gccgctggcg gccggtcttg
      781 cgacattgct ggcagtgaaa tagacggtct ctccaacgtt gtatttgtgc ttcaacgccc
      841 tctccatcac gcaaaaacgc cggccgcgcc tacggtccca cttgcttcgg ccgactgcaa
      901 aaaccagccg ttatatagca cgccgcggac cccgttgacc agttacatcg ggacatggca
      961 aatgcgcaga ttttgcagcc ttttcagtgc gatagggaac tttttggact ccggagaacc
     1021 gcgcctggcc aaatccggaa ccacggatgc cgatgcctta cgcgttatgg ggaagcttgc
     1081 cgtccggact ggcgtgatcg acggcaagtg gaagctggtg cgccagcagt tccgaaatct
     1141 gatcgaccgg aatgttgtat ttggcggcga gttgccggac ggtgtcgttg cccagcacct
     1201 gccgcacctg atccgccgtg atcggcaggt tctgaccggt cccgatccag gacttgacct
     1261 ggtcgccgag gcccgcctgc tgcagtttgg caacgatcgc gttgaggccg cccgtgctgc
     1321 cggtgcccat cacttcgccg agcacgaccg gaagcaccgc ggcgccgagt tggccaagca
     1381 cgcccttgag cgccggcgaa ttttccagtg aatcgagaaa tcccacggcc aagtcctttc
     1441 gctgaattca cagtgccggt tcgcggcgat tcacaccgtt tcgcagggtc ccgtcaagcc
     1501 gcgattgcgg ccagcgttcg tcaatggagg cctcacgccg tctcaaatct gtcaatcacg
     1561 atggtctcgg caaggcccgc tttggtccat tcctgaaacg caggtagcgc cagcatcgta
     1621 tc
//
LOCUS       DATAVD010001275         2638 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2168530, whole genome shotgun sequence.
ACCESSION   DATAVD010001275 DATAVD010000000
VERSION     DATAVD010001275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2638
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2168530"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1285)
                     /locus_tag="VHX39_24285"
     CDS             complement(<1..1285)
                     /locus_tag="VHX39_24285"
                     /inference="COORDINATES: protein motif:HMM:TIGR01844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family outer membrane protein"
                     /protein_id="HEX3994303.1"
                     /translation="MQPPPRAAVGMQPGGLRVGSARQQATYGVPHTLIQALAATYSYQ
                     PALQAERAKLRATDETVPAALAGWRPTVQFSGSGGYGSGTTRAYTFTSHSVLSSPTDR
                     LIGTAAVQAQQTLYNGGKNQANINRAKDQVMAERATLIAQEQTSFTNAVNAYVNVISA
                     KETLDLNINNEIVLTKQLQATNDRFRVGEITRTDVAQAEAALAGATAQRQTSEGQLES
                     ARGTFQQIIGVLPPMDLIPPQPLDLQLKDETAAIAMAQTNNPQVIAAQFNDAAAKDAI
                     DVALAALLPSVTLQGQIFQQNNASGWSTQSNGYQVTANLAIPIYQGGSEYAGVRQARQ
                     QEQQTQRLVDDARRTAVQNAVQAWETLVAAVASADSTRSQIRANEIALEGVEREAIVG
                     SRTTLDVLNAQQLLLNSRTTLVQNLAQLIQGSYGVA"
     gene            complement(1843..2547)
                     /locus_tag="VHX39_24290"
     CDS             complement(1843..2547)
                     /locus_tag="VHX39_24290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012555008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEX3994304.1"
                     /translation="MAQATTNVAPDSFLIDARNRMVDSQVRPNKVSDPRILDAMRHLP
                     RERFLPDALLAMAYADQNVPLGGGRVLLQPMALARLVQAAVPLPGEKVLVVAAGTGYS
                     AALFAALGCEVTALEEPGVLLDLAKPVLATVAPSVKLVSGSLPAGWPAGAPYDIILID
                     GAVPEVPATIASQLNRETGRLFTIIMPKSATGGTHRTGLAVHAEPTPAGVSQRALFDC
                     LCPILPGFARAPAFEF"
BASE COUNT          459 a          807 c          877 g          495 t
ORIGIN      
        1 ccgcgacgcc atatgaaccc tgtatcaact gggccagatt ctgcaccagg gttgtccgtg
       61 aatttagcag tagttgctga gcattcagca catcgagtgt ggttcggcta ccgacaatcg
      121 cttcacgctc cacaccttcg agggcaattt cgttggctcg gatctgtgag cgcgtgctgt
      181 ccgccgaagc gacggccgcg accagggtct cccacgcctg cactgcgttt tgcaccgcag
      241 tgcgccgcgc gtcgtcgacc aggcgctgtg tctgctgctc ctgctgacgc gcctgccgga
      301 caccggcgta ttccgaaccg ccctggtaga tcggtatcgc gaggttcgcc gtgacctgat
      361 agccattgga ctgggtcgac caacccgacg cattgttttg ctggaaaatt tgcccctgca
      421 acgtgaccga cggcagcagc gccgccagcg ccacgtcgat cgcgtccttg gctgcggcgt
      481 cgttaaactg cgcggcgatg acctgcggat tgttggtctg cgccatggcg atcgcggcag
      541 tctcgtcttt cagctgcagg tccagcggct gcggtggaat gaggtccatc ggcggcagca
      601 caccgatgat ttgctggaag gtgccgcggg ccgactcgag ttgaccttcc gacgtttgcc
      661 gctgtgcggt cgcaccggcg agcgcggcct cagcctgcgc cacgtcggta cgcgtgattt
      721 caccgacccg gaaccggtcg ttggtcgcct gcaactgctt ggtcagaacg atttcgttat
      781 taatgttaag atcgagcgtc tcttttgccg agatcacgtt aacataagcg ttcaccgcgt
      841 tggtgaagct ggtttgctcc tgggcgatca aggtcgcacg ctcagccatc acctggtcct
      901 tggcgcgatt gatgttcgcc tggttcttac cgccgttata gagcgtttgc tgcgcctgca
      961 cagccgcggt gccgatcagg cggtcggtcg gtgagctgag gacggagtgg ctcgtgaagg
     1021 tataggcccg cgtcgtgccg ctgccatagc cgccgcttcc gctgaactgc acggttggac
     1081 gccagcccgc caaagccgct ggcacggttt cgtcggtggc acgcagtttg gcacgttcgg
     1141 cctgcagcgc cggttggtag gaataggtcg cggccaaggc ctggatcaac gtgtgcggca
     1201 cgccataggt ggcctgttgc ctggcagagc cgaccctgag accacccggt tgcatgccga
     1261 ccgcggcccg cggtggcggt tgcaccggcg gcgtccctgc ctccatagcc accggattag
     1321 gctcggaacc cggcggtgca gcgcgaggcc gacccggcgc cggagtcctt ggcgcctggg
     1381 tcacagccgg acctgacggc ggcgccatca ccggcgactg ctgcatgggc gagggcagga
     1441 tcggtggagg aggttgaggg aggttgttag gggttagcgg ggtcggcaac agttgacccg
     1501 ggccgggctg ggtctgagcg aacgccttcc cgccgacgag cgcgggaagc aacggcagaa
     1561 gcaaaatgag acgcgaaccc atgcaacacc ttacagtcag accagcgtgt gaacagtcaa
     1621 atacttatgg cattcggaag caagacaaag tgccaaccta tcggcttacc gccggctatg
     1681 acccgcctca gaagctgtgc cacaaactgg cggggtgcgc catgacttac atactcgcgt
     1741 attcggcgcc cgcggtattc tcttgttatc gggatggttg ttacagatcg attaacgcag
     1801 ggcgcgcgga aggcccaggc gcgaatccgt gcctcgagag ggtcagaact cgaatgcggg
     1861 agcccgtgcg aagcccggca atatcgggca gaggcaatcg aacagcgcac gctgggaaac
     1921 gccggccgga gtcggctcgg catgcactgc gaggccggtg cgatgcgttc cgcccgtggc
     1981 ggatttcggc atgatgatgg tgaacagccg cccggtttcc cgattcagtt ggcttgcgat
     2041 ggttgccggg acctcgggca ctgcaccgtc gatcagaatg atgtcgtagg gggcacccgc
     2101 cggccaacca gccgggaggg aaccgctgac cagcttcacc gaaggtgcga ctgtcgcgag
     2161 caccggcttc gcgaggtcca gcagcacgcc gggttcttca agcgcggtaa cctcgcagcc
     2221 gagggcggca aacagcgcgg ccgaataacc ggtgccggcc gcgaccacga gaaccttctc
     2281 gccggggagt ggcacggcgg cctgcaccag gcgggccagt gccatcggtt gcaacaacac
     2341 ccggccgcca cccaacggca cgttctggtc agcgtatgcc attgcgagca acgcgtcggg
     2401 cagaaagcgc tctctcggca gatggcgcat ggcatccagg atgcgcggat cggacacctt
     2461 gttggggcgg acctgactgt ccaccatccg attccgggcg tcgatcagga aactgtcggg
     2521 cgcgacattt gtggtggcct gggccatcat cgtctcattc tgtcaggggt cgctggccgt
     2581 atacagtgcc cgagcaggga atgccaggcg tgagtttgcc cttgggtggg tcactgcg
//
LOCUS       DATAVD010001276         4602 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1050765, whole genome shotgun sequence.
ACCESSION   DATAVD010001276 DATAVD010000000
VERSION     DATAVD010001276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4602
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1050765"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(15..1115)
                     /locus_tag="VHX39_24295"
     CDS             complement(15..1115)
                     /locus_tag="VHX39_24295"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3994305.1"
                     /translation="MSQSVLEYDAPQKSKTGIVDCDIHPNFRSNADLLPFLPKRWAAH
                     WQEYGSHLRQGLSSTLAHPRMTPAVARADAWPPNGGPPGSDLAFMRAHHLDAYGIEHG
                     MLMCLRPGGCDERNLDFGAALCSATNDWQLEAWVKPEPRLSAGITISQEDPAAAVAEI
                     ERCAPNSAYRIINMPPRMAEPPGRRRYWPIYQAAVAAGLPIGLHISGVPGHPSTGAGW
                     PSFYMQEHHANAQSMQAVVTSLIMEGVTDHFPDLRFVLIECGFAWAPSLGWRLDRLWN
                     RMRTEVPHVKRPPSEYIRDRFWYTTQPIEETEEPEHLRQIIDWIGWDRLLFSTDYPHW
                     DFDDPRYTFRIQLTEAERQGVFLNNARRVFRL"
     gene            complement(1112..2215)
                     /locus_tag="VHX39_24300"
     CDS             complement(1112..2215)
                     /locus_tag="VHX39_24300"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3994306.1"
                     /translation="MRQKRTIQQPTQGAIDCDVHVAVPSVGALLPYCDDYWADQFRIR
                     GIDRLDFSLTAYPPNAPLSARPDWRPKQGAPGSDLALLKAHLDRFGLRAAIAQCLHGS
                     MALHSEDMAAAFCRAINDWMRAEWLDAEPRLFGAITIPMQSPDLAAKEIERCAADPRF
                     VQILLPAMTDMPLGRRYYWPIYQAAERHGLTIGIHAGGMFRHAPTPTGWPSFIIEDYA
                     AQAQAFDSQLLSLITEGVFAKFPDLTVVLLESGITWLPPFMWRTNKIWRGLRPDAPWV
                     DRPPADIVRDRVRLTLQPFDAPEDPAKVRATLNHIDGEKMLLFSTDFPHWQFDGDNAL
                     PAGLPPEMLPALLSGNALASYPRLAAALQETVA"
     gene            2267..3577
                     /locus_tag="VHX39_24305"
     CDS             2267..3577
                     /locus_tag="VHX39_24305"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994307.1"
                     /translation="MLVNVTEIIDAAKLNAYHLRVVGLCALLIFFDGFDLQAISYAAP
                     AVSGALGISRPMLGPVFSAGFIGLTTGALAFGLLGDRWGRKTVFILCGVLFGLASLGT
                     ATSGDLTQLLLWRLLAGFGLGGATPISITIATDYCPTRLRATLTMIMYCGFTFGGVFG
                     GWIASLVLPYGWEVLFYIGGAVPLLLTPLLMLALPETVEFLVNNNRDPGRIARILARV
                     QPGFVAPAGARFVLQHQDAGGFQVVELFRHGRAVRTLLLWGIFFSSLVALFAFSTWLP
                     SLLNSRGLTPGQIVGITGAFQGGGLIGSLIFARLILRVRPFLLIAVGYLASSVFLVVF
                     SRMPAVYPMLFASGLVAGVCLVGTQNLLNAMSAQLYPPAIRSTGVGWAIGVGRSGAIL
                     GPSIAGLLLAFHFSGSDLFMFAAIPPAVAGLITFVLLRSLRPGV"
     gene            3646..>4602
                     /locus_tag="VHX39_24310"
     CDS             3646..>4602
                     /locus_tag="VHX39_24310"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3994308.1"
                     /translation="MDFQISAQQREMVASVRSLAQTEFKPNAMRWMDGTFPWENMKKL
                     ADLGVLGMSVPEEYGGLGLPILDTALILEEIAKVDYVTAMAVLGEAGVQTRVIARYAP
                     ASIRERILPQVVSGDCILAVCMTEPHAGTDVANYRTNARIVGDRVILKGTKTLISRAP
                     EAGMFVVFTRVDGKPGREGIGCVLLEAGTPGFAVTGTYHTMGGENLHEIQFDDCELPL
                     ENLVIREDGFRKLLTAFNTQRCLNPSISLGLAEGAFDEAVNYVRERTIFNKPISDFQG
                     IRWKLADMFKDIEAARGLLYRACLTANPFPDPFMAAAAKIFCN"
BASE COUNT          726 a         1251 c         1649 g          976 t
ORIGIN      
        1 acgctggttt ggcatcatag cctgaatacc cgacgggcgt tgttaagaaa cacgccttgt
       61 cgttctgcct cggtcagttg gatacgaaac gtatagcggg ggtcatcgaa atcccaatgc
      121 gggtagtccg tcgagaacag cagccggtcc cagccgatcc agtcgatgat ctgccgcaga
      181 tgctccggtt cttcggtttc ctcaatcggt tgggtcgtgt accagaaccg gtcgcggatg
      241 tattccgatg gcggtcgttt cacgtgcggg acttcggtgc gcatccggtt ccatagtctg
      301 tcgaggcgcc agcccagcga tggcgcccag gcgaagccgc attcgatcag cacgaaccgc
      361 aagtcgggga aatggtctgt tacgccctcc atgatcaggc tggtcaccac cgcttgcatg
      421 ctctgcgcat tggcgtggtg ttcctgcatg tagaaggacg gccagccggc gccggtggac
      481 ggatggccag ggacgccgga gatgtgcagg ccgatcggca atccggcggc gacggcggcc
      541 tgatagatcg gccagtagcg gcggcggcca gggggttcgg ccatacgggg cggcatgttg
      601 atgatgcggt aggcgctgtt gggcgcgcaa cgttcgatct cggccaccgc tgcggcgggg
      661 tcttcctggg aaatggtgat gccggcggac aatcttggtt cgggcttcac ccaggcctca
      721 agctgccagt cgttggtggc ggaacagagg gcggcgccga agtccagatt ccgttcgtcg
      781 cagccgccgg ggcggaggca catcagcatg ccatgctcga tgccgtaggc gtccaggtga
      841 tgcgcgcgca tgaaggccag atcggagcct ggcggcccgc cattgggagg ccacgcatcg
      901 gcgcgggcca cagccggggt catgcgggga tgcgccagtg tcgaggacag gccctgacgc
      961 agatgcgaac cgtattcctg ccaatgggcg gcccagcgct tgggcaggaa cggcaacaga
     1021 tcggcattgg aacggaaatt cggatggatg tcgcaatcga cgatgccggt tttggatttc
     1081 tgcggcgcgt cgtattcgag gacactctgg ctcatgcgac agtctcctgg agcgcggcgg
     1141 ccagccttgg gtaactggcc agcgcattgc ctgacagcag cgccggcagc atttccgggg
     1201 gcaggccggc gggaagcgcg ttgtctccgt cgaattgcca gtgtggaaaa tcggtggaga
     1261 acaacagcat tttttcgccg tctatgtggt tcagcgtggc gcgtaccttg gcagggtctt
     1321 cgggtgcgtc gaacggctgt aatgtcaggc gcacgcggtc tcgcacgatg tcggccggcg
     1381 ggcggtccac ccagggggcg tcgggacgca ggccgcgcca gatcttgttg gtgcgccaca
     1441 tgaacggcgg cagccaggtg atgccggatt ccagcaacac cacggtcagg tctgggaatt
     1501 tcgcgaacac gccctcggtg atcaggctga gcaactggct gtcgaacgcc tgggcctgcg
     1561 cggcgtagtc ctcaatgatg aaggatggcc agccggttgg tgtcggggcg tggcggaaca
     1621 tgccgccggc gtggatgccg atggtcaggc cgtgacgttc cgcggcctgg tagatcggcc
     1681 agtaataacg gcgaccgagc ggcatgtcgg tcatggcggg gaggaggatt tggacgaagc
     1741 gggggtcggc ggcgcagcgc tcgatttcct tcgccgccag atcggggctt tgcatcggta
     1801 tggtgatcgc gccgaacagg cgtggttcgg catccagcca ttccgcccgc atccagtcgt
     1861 tgatcgcccg gcagaacgca gcggccatgt cctcgctgtg gagcgccatg gagccgtgga
     1921 ggcactgcgc gatggctgcg cgcagtccga aacgatccag atgggctttt agcagtgcca
     1981 aatcggaccc tggtgcgcct tgtttgggcc gccagtcggg acgagccgac agcggcgcgt
     2041 tcggcgggta ggcggtcagg ctgaaatcca ggcgatcgat gcctcggatg cggaactggt
     2101 cggcccagta gtcgtcacaa tagggcaaca aagcgccgac cgacggcacc gcgacatgca
     2161 catcgcagtc gatcgcgcct tgcgtcggtt gctgtatcgt tctcttctgc ctcatcagcc
     2221 catgacacgc cgggaaacgg cgaaatgcaa ccgggggaag ccgaacgtgc ttgtgaacgt
     2281 caccgagatc atcgatgcgg ccaaactgaa tgcctaccac ctgcgggttg tcgggctttg
     2341 tgcgttgctg atctttttcg acggcttcga cctgcaggcg atcagctatg ccgcgccggc
     2401 ggtgtcgggc gcgctgggga tttctcgccc gatgctggga ccggtgttct cggccgggtt
     2461 catcggcctg accacgggtg ccctggcgtt cggtctgctg ggcgaccggt ggggccggaa
     2521 gacggttttc atcttgtgcg gggtgctgtt cgggctggcg tcgctgggca ccgcgacgtc
     2581 cggtgatctg acgcaattgc tgctgtggcg gctgctggcc gggtttggcc tgggcggtgc
     2641 cacgccgatt tccatcacca tcgcgacgga ttactgtccc acgcggctac gcgccactct
     2701 gacgatgatc atgtattgcg ggttcacgtt cggcggggtg ttcggcggtt ggatcgcctc
     2761 attggtgctg ccgtacggtt gggaagtgct gttctatatc ggcggtgcgg ttccactgtt
     2821 gctgacgcct ttgttgatgc tggccctgcc ggagacggtc gaatttttgg tgaacaacaa
     2881 ccgtgatcct gggcgtatcg cccgtattct ggcgcgtgtg cagcccggat ttgtcgctcc
     2941 ggcgggggcg cggttcgtgt tgcagcatca ggacgcgggc gggttccagg tcgtcgaatt
     3001 gttccgtcat ggtcgggcgg ttcgcacgtt gctgctgtgg gggattttct tcagcagcct
     3061 ggtggcgctg tttgctttct cgacgtggct gcccagcctg ttgaacagcc gggggctgac
     3121 gccggggcag atcgtcggca tcaccggtgc gtttcagggc ggcggcctga ttgggtcgct
     3181 gatcttcgct cggcttatcc tgcgggtccg gccgttcctg ctgatcgcgg tcgggtattt
     3241 ggcgtcctcg gtttttctgg tggtgttttc gcggatgccg gcggtctatc cgatgctgtt
     3301 cgcgtcaggt ctggtcgcgg gtgtctgttt ggtcggcacg caaaacctgc tgaatgcgat
     3361 gagtgcgcag ctttatccgc cggcgatccg atccaccggg gtggggtggg cgatcggcgt
     3421 tggccgctcc ggtgcaatat tgggaccgag tatcgcgggg ttgttgctgg cgtttcattt
     3481 ctcggggtcg gatctgttta tgttcgccgc gattccgccc gcggtggcgg ggttgatcac
     3541 gtttgtgctg ttgcggtcgc tgcgcccggg ggtttgaccg aagtcgaatt gcgctttgtg
     3601 gtctgatgtt tacactcccc ggcctggggc gaggaagaca gaaccatgga ttttcagatc
     3661 agtgcgcagc agcgggagat ggttgcctcc gtgcggtcgc tggcgcagac cgaattcaag
     3721 ccgaatgcca tgcgctggat ggacggcacg tttccgtggg agaacatgaa gaagctcgcc
     3781 gatctgggcg tgctggggat gtcggtgccg gaggaatatg gtgggctggg actaccgatc
     3841 ctggataccg cgttgattct ggaggagatt gccaaagtcg attacgtcac cgcgatggcg
     3901 gtgttggggg aggctggggt gcagacgcgg gtgatcgcgc gttacgcacc ggcctcgatc
     3961 cgggagcgta ttcttcccca ggtggtcagc ggcgactgta tcctggcggt ttgcatgacg
     4021 gagccgcatg ccggcaccga tgtggcgaat taccggacca atgctcgtat tgtcggcgat
     4081 cgggtgatcc tgaaggggac caagacgctg atcagccgag cgcccgaggc gggaatgttt
     4141 gtggtgttta cgcgggtgga tgggaagccg ggacgggagg ggattgggtg cgttttgctg
     4201 gaggccggca cgccgggctt cgcggtgacg ggcacctatc acacgatggg cggggagaac
     4261 ctgcacgaga ttcagttcga cgactgcgaa ttgccgctgg agaacctggt tattcgcgag
     4321 gatggatttc gcaagctgct gacggcgttc aatacgcagc ggtgtcttaa tccgtcgata
     4381 tcgctggggc tggcggaggg ggcgttcgac gaggcggtga attatgtgcg ggagcggacc
     4441 attttcaaca agccgatctc ggattttcag ggcatccgct ggaaattggc tgatatgttc
     4501 aaggatatcg aggcggcgag ggggttgctg tatcgggctt gcctgacggc caatccgttc
     4561 cccgatccgt tcatggcggc ggcggcgaag atattctgca at
//
LOCUS       DATAVD010001277         2868 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3471238, whole genome shotgun sequence.
ACCESSION   DATAVD010001277 DATAVD010000000
VERSION     DATAVD010001277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2868
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3471238"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2868)
                     /locus_tag="VHX39_24315"
     CDS             complement(<1..>2868)
                     /locus_tag="VHX39_24315"
                     /inference="COORDINATES: protein motif:HMM:NF012873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid adenylation domain-containing
                     protein"
                     /protein_id="HEX3994309.1"
                     /translation="ALVRHVGQPRAGGRSPSDLPLIKLPQADIERLERRYAQLEDILP
                     LAPLQEGFLFHALYDAQAADAYTGQLVLDLEGPLEAEILAKAVAALLQRHASLRAGFT
                     HENLERPAQIILAAVKPPWRSIDLSSLEPAEADARANDIAAQDRTTRFDMASPPLLRF
                     TLMRLPADRHRLVVTNHHILMDGWSLPIFVRELLTIYARKGNADVLPPVAPYRNYLAW
                     IATQDRAAAISAWQEALAGLEEATRLVPFDPGRAPVAPDHVTLEFSETQTTALTQQAR
                     AQGLTINTYIQAAWGILLGRLTGRNDVVFGVTVAGRPPELSGIENMVGLFINTLPLRL
                     KLPPAQPLCALLAELQDKQSALMAHYHVGLAEIQTAAGLGDLFDTLVVFENYPVEHAK
                     PVTAVSGLRLADVTGYGATHYPLSLLVLPGERLQFRLRYRSDLFDRGTIDAMGTRLIR
                     LLDMAMAGPERPIGRLDILAPAERHTILQEWNDTAHSLRPTTLPDHFAAQVVKTPDAV
                     AVVFEDQTLTYGDLDARANQLAHYLRSLGVGPEVVVGLYFDRSPDLIVAIIAVLKAGG
                     AYLPLDPTYPTERLSFMMGDVKAPILLTHARQRGRLPAHQSATIDLDRDAAAIAAQPT
                     WNPRSGVAAGNTAYVIYTSGTTGQPNGVIVSHAAICNYLAWGVASCGLDRGIGAPILN
                     SVAFDATAASLFLPLLSGKRILLVPDGEQFAILAGSFDGIGDFSLLKLTPAHLDMINQ
                     SGPLERLAGLAHCLLVGGESITAAHVTGWLRQLPAVRIINQYGPTETTCGSVVHTIAD
                     ADVSASTIPIGRPIWNTRTYILDAGLQPLPCGINGELYIAGAGVARGYCGRPGLTAER
                     FIADPFGQAGSRMYRTGDLARWRPDGEIEFLGRRDTQITIRGFRIELGEIEAVLNSHP
                     DVAQAVTIAREDRPGDKRLISYVVPSAGVLLQAEELRSHLDR"
BASE COUNT          572 a          886 c          908 g          502 t
ORIGIN      
        1 cgatcgagat ggctccgtaa ttcttcggcc tgtagaagta cgcccgctga cggcacgaca
       61 taactgatca accgcttgtc gccagggcga tcctcgcggg caatcgtcac cgcctgcgcc
      121 acgtccggat ggctgttcag aaccgcctcg atctcgccca gctcgatgcg aaagccgcgg
      181 atcgtgatct gggtgtcacg ccgaccgaga aactcgatct caccatcggg ccgccagcgc
      241 gccagatcgc ccgtgcgata catgcgactg ccggcctgac cgaaaggatc ggcaatgaac
      301 cgctccgccg ttagaccggg acgcccgcag taaccacggg caacgccggc gccggcaatg
      361 taaagctcgc cgttaatacc gcagggcaat ggttgcagcc cggcgtcgag gatgtaggtt
      421 cgcgtgttcc aaatgggccg gccgatcggg atcgtgctgg cgctgacatc ggcgtcggca
      481 atagtgtgaa cgacactgcc gcatgtggtc tcggtcggcc catactgatt gatgatccga
      541 accgcaggca gctgacgaag ccagccagtg acatgcgcgg cggtaatgct ctcgccaccg
      601 accagcaggc agtgggccaa tccggcaagc cgttcgagcg ggcccgattg attgatcatg
      661 tcgagatgtg ctggcgtcag cttaagcagg ctgaaatcgc ctataccgtc aaagctgccg
      721 gcgaggattg cgaactgttc gccgtccggc acgagcagga ttcgcttccc ggaaagcagc
      781 gggaggaaaa gcgaagccgc ggtggcgtca aaggcaacgg agttgaggat cggcgcaccg
      841 atgccgcggt ccagcccgca gctggcaaca ccccaggcca gatagttgca aatcgcggcg
      901 tggctgacga tcacgccatt gggctgtccg gtcgttcccg aggtgtagat cacataggcg
      961 gtgttacctg ccgcgactcc gctcctaggg ttccaggtcg gctgggcggc tattgcagca
     1021 gcgtcacgat cgagatcaat cgtcgcactt tgatgggcgg gcaagcggcc gcgctgccgg
     1081 gcatgtgtca gcaggatcgg agccttcacg tctcccatca tgaaggacag tcgttctgtc
     1141 ggatacgtcg gatcgagtgg caggtaggcg ccgccggcct tgaggaccgc gataatcgcg
     1201 acaatcagat cgggtgagcg atcaaagtac aggccgacga caacctcagg cccaacgccg
     1261 aggctgcgca ggtagtgcgc caactgattg gcccgggcat cgagatcgcc ataggtcagc
     1321 gtctggtcct cgaacacgac cgcgaccgca tccggcgtct taacaacttg cgcggcgaaa
     1381 tggtcaggca aggtcgtcgg acgcagggag tgcgcggtat cgttccactc ctgcaggatg
     1441 gtgtgacgct cggccggagc aagaatgtca aggcggccga ttggccgctc cggccctgcc
     1501 atcgccatgt ccagaaggcg gatcagccta gtccccatgg catcgatggt gccgcgatca
     1561 aatagatcgg accgatagcg caatcgaaac tgcagacgct ctcccggtag caccaacaga
     1621 ctcaatggat aatgggtggc accgtatcct gtgacgtctg cgagccgcaa tccgctgacg
     1681 gccgtcacag gttttgcgtg ctcgaccgga taattctcga acaccacgag cgtatcgaaa
     1741 agatcgccca agccggccgc agtctgaatc tcagcaaggc caacatggta gtgcgccatg
     1801 agggcggatt gcttatcctg cagctcggca agcagggcac acagcggttg ggctggcggc
     1861 agcttcagcc gcaacggcag ggtgttgatg aatagcccca ccatgttctc aatgccgcta
     1921 agttccgggg gccgccccgc caccgtgacg ccgaacacca catcattgcg ccccgtgagg
     1981 cgaccgagca ggatccccca agcagcctga atgtaggtgt tgatcgtcag cccttgcgca
     2041 cgggcctgct gtgtcaatgc cgtggtctgg gtctcgctga attcaagcgt gacgtggtcc
     2101 ggcgcgaccg gcgcgcgccc aggatcgaac ggaaccagcc gcgttgcctc ttccagaccc
     2161 gccaaagctt cttgccaggc cgagatagct gccgcacggt cctgcgttgc aatccacgcc
     2221 agataattgc gatacggcgc cacgggaggc aggacgtcag catttccctt gcgcgcataa
     2281 atcgtgagca gttcgcgaac gaagatcggc agcgaccagc catccatcag gatgtggtgg
     2341 ttggtgacaa ccagccggtg ccggtcagcc ggcagtctca tcaaggtgaa gcgcaacaat
     2401 ggaggcgacg ccatgtcgaa gcgcgtggtc cgatcctggg ccgcgatatc gttcgcgcgg
     2461 gcgtccgctt ctgctggttc cagcgaggac aaatcgatgc tgcgccacgg cggcttcact
     2521 gcggcgagaa tgatttgcgc cgggcgctct agattctcat gggtgaagcc agcccgcagg
     2581 ctggcatgac gttgcagcag cgccgccacc gctttcgcca gtatttcggc ttcgagcggc
     2641 ccttccagat cgagaaccag ttgtccggta taggcgtccg ccgcctgggc atcatagagc
     2701 gcatggaata aaaatccctc ctgcaagggc gccagcggca ggatgtcttc cagttgcgcg
     2761 tagcggcgct ccagccgctc gatatcggcc tggggtaatt ttatgagcgg cagatcgctg
     2821 gggctgcggc ccccagcccg cggctgcccg acgtggcgga ccaacgcc
//
LOCUS       DATAVD010001278         2414 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2353289, whole genome shotgun sequence.
ACCESSION   DATAVD010001278 DATAVD010000000
VERSION     DATAVD010001278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2414
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2353289"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..334
                     /locus_tag="VHX39_24320"
     CDS             <1..334
                     /locus_tag="VHX39_24320"
                     /inference="COORDINATES: protein motif:HMM:NF015214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase C-terminal
                     domain-containing protein"
                     /protein_id="HEX3994310.1"
                     /translation="FWMPRATEIIKLLGSHNLLATPTWDMMRNPELRPFIDKYLHGAG
                     DVDAERRTRLFRLAWDYAGTALASRVELYERFYLTSGARNQQRAQGLAKRESALALVE
                     RFLTEPVE"
     gene            399..1136
                     /locus_tag="VHX39_24325"
     CDS             399..1136
                     /locus_tag="VHX39_24325"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX3994311.1"
                     /translation="MIEQTLDIVTKDGAMETFIVHPDHGAHPPVLLLMDAPGIREELR
                     DMARRLATVGYFVMLPNLYYRAGRDTIYGPDVLTKGSAEQARMRAVRTKMTIPPVMDD
                     VAAMIAYADGQAAAKPGPVGTHGYCMSGPYSLAAAARYPDRVAAAASFYGTWLVSENA
                     ESPHLNLGKAKGELYIACAEHDELAPLPMVEELKILFEKSGNPGALEMYPGVHHGYAF
                     PQRWCYDQPAAERHWERLIALYRRRLG"
     gene            1141..2319
                     /locus_tag="VHX39_24330"
     CDS             1141..2319
                     /locus_tag="VHX39_24330"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3994312.1"
                     /translation="MMELWNHCENPYPFVPAEVLDAAPSVRASLPSKYCEPEIAAQLY
                     DEVFAEYQHCDDIGLHIVTNEHHSGINNLWAASPVITGVVARLTRKVRILSLGTLVTV
                     RPDPVRVATEYATIDVLSRGRLDIGFVKSGATEMTSGDANPMRIREREWEAIDLIEKA
                     LTSHDGPFSWEGKFFSHAHVNVWPRPYQSPRPEFWAATSDLPTCAELGRRSIINTLLF
                     GGYERTRTAFNTYKQARVAAGLPAPGEDRFSYMAFCYVGDTDEEAYRIGQKIPWFLTV
                     SIKSAPQMSKFMPGQIPPEMTPSAWRAGASKRPTDLSVESLVRQGQMFCGNPDTVVRQ
                     IKDFRQRVGGVGRIIMMTRQGLVTHAEAMKSFTLAAREVLPQLQGLGPVDLDMPTAAQ
                     "
BASE COUNT          465 a          701 c          771 g          477 t
ORIGIN      
        1 gttctggatg ccgcgcgcca ctgagatcat caagctgcta ggttcgcata acctgctcgc
       61 gacaccgacc tgggacatga tgcgaaaccc agagctgcgg ccgtttatcg acaaatatct
      121 gcatggcgcc ggcgatgtgg atgccgagcg gcgcacgcgg ctgttccgtc tggcctggga
      181 ctatgccggc acggcgttgg cgtcgcgcgt ggaactgtac gagcggttct atctgacctc
      241 gggcgcccgc aatcagcaac gcgcacaggg actggcgaag cgagagagtg cgctcgcact
      301 ggtggagcgg tttttgaccg agcccgtgga gtgacggcgc cttgcctgag gtttggcgaa
      361 gtggaatcct gtgggtctga agcgcccagg agatcgtagt gattgaacaa acgctggata
      421 tcgtcaccaa ggatggggcg atggaaacgt tcatcgtcca tccggaccac ggcgcgcacc
      481 ctccggtgct gttgctgatg gatgcacctg gcatccgtga ggaattgcgc gatatggcac
      541 gccggctcgc caccgtcggt tatttcgtga tgctgccgaa tctttattat cgcgccggcc
      601 gcgatacgat ttacggtccg gatgtgctga ccaaaggcag cgccgagcaa gctcgcatgc
      661 gagcggtgcg caccaaaatg acgatcccgc cggtcatgga cgatgtcgct gcgatgattg
      721 cttatgccga tggtcaggcg gcggcgaaac cgggcccggt tggcacacac ggctattgca
      781 tgagcgggcc ttactcgctg gccgctgcgg cgcggtatcc ggatcgggtt gccgccgccg
      841 catcgttcta tggcacctgg ctggtgtcgg agaatgcaga gagcccgcac ctcaatctcg
      901 gcaaggccaa aggcgaattg tacatcgcct gcgccgagca cgacgaactg gcgccattgc
      961 cgatggtgga ggaactcaaa atcctgttcg agaaatccgg caatccgggc gcactggaaa
     1021 tgtatcctgg cgtgcatcat ggttacgcct ttccgcagcg ctggtgttac gaccaaccgg
     1081 ccgccgaacg gcattgggaa cgcctgatcg cgctgtatcg ccgccggttg ggataattcg
     1141 atgatggaac tttggaacca ctgcgagaac ccgtatccgt tcgttccggc cgaggtgctg
     1201 gatgccgctc catcagtgcg cgcgagcctg ccgagcaaat actgcgagcc ggaaattgct
     1261 gcgcaactct acgatgaagt gttcgcagaa tatcagcatt gcgacgatat cggtttgcat
     1321 atcgtcacca atgaacacca ttcgggcatc aacaatctgt gggcggcaag tccggtcatc
     1381 accggtgttg tcgcgcggct gacccggaaa gtgcgtatct tgtctctggg cacattggtc
     1441 accgtgcgac ccgatccggt gcgggtggcc accgagtatg caacgatcga tgtgctgtcg
     1501 cgcggtcggc tggacatcgg ctttgtgaag tcgggcgcga cagagatgac gtccggtgat
     1561 gccaacccga tgcgtattcg cgagcgcgaa tgggaagcga tcgacctgat cgagaaagcc
     1621 ctgacctcgc atgacggacc gttcagttgg gaaggcaagt ttttttccca tgcgcatgtg
     1681 aacgtttggc cgcgacccta tcaatcgccg cgccccgagt tctgggctgc cacctccgac
     1741 ctcccgacct gcgccgaact gggccgccgc agcatcatca acacgctgct gtttggcggt
     1801 tatgagcgca cgcggaccgc gttcaacacg tataagcagg cgcgcgtggc agccggtctg
     1861 ccggcacccg gtgaggaccg gttttcctac atggcatttt gctacgttgg cgatacggat
     1921 gaagaggcgt atcggattgg ccagaaaatc ccctggtttc tgaccgtcag tatcaaaagt
     1981 gcgccgcaga tgtcgaaatt catgccgggc cagatcccgc ctgagatgac gccgtccgca
     2041 tggcgcgccg gtgcctcgaa gcggccgacc gacctctcgg tcgaaagcct ggtgcgccag
     2101 ggccagatgt tctgcggcaa tcccgatacc gtggtccgtc agatcaagga ttttcgtcaa
     2161 cgggtcggtg gcgttggccg aatcatcatg atgacgcgcc agggtctcgt gacgcatgcc
     2221 gaagcaatga aaagcttcac gctcgctgcc agggaagtgc tgccgcaact gcagggcctc
     2281 ggaccggtcg atctcgacat gccgacggcg gcgcaatgac cgtgatgcgg gtcgggtcgt
     2341 tcgaggttga gacactcagg gtgggcagcg ggcggccgat gttgctgatc catggcgtga
     2401 atccgatcca ccca
//
LOCUS       DATAVD010001279         4437 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3471291, whole genome shotgun sequence.
ACCESSION   DATAVD010001279 DATAVD010000000
VERSION     DATAVD010001279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4437
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3471291"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..1361)
                     /gene="argJ"
                     /locus_tag="VHX39_24335"
     CDS             complement(108..1361)
                     /gene="argJ"
                     /locus_tag="VHX39_24335"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HEX3994313.1"
                     /translation="MTNAGSPAEGAWKPNGPGVSPLAVGLPELPSLAGVRLNATAAGI
                     RYLGRTDLVMMEVPAGSTAAGVFTSNKCPGAPVDWCRDALAGGKARMVVVNAGNANVF
                     TGRAGRETCAATAAAAARLVDCAPSEVFVASTGVIGEVLPHDKLIAALPALHAGLSSD
                     GWEAAARGIMTTDTFPKASTRVAKIGGTEVRITGIAKGSGMIAPDMATMLCFVFTDAA
                     IPGASLQSMLKKGVDRSFNCTTVDSDTSTSDTVLLIATGQARNPAAALTDFSTKLSEV
                     LMDLALQVIRDGEGAQKLVRIDVTGAVSARSAKRIAMTVANSPLVKTAIAGEDANWGR
                     IVMAVGKAGEPADRDRLSIGVGGVWMAREGGVIPGYDETPVVAHMKGREIEMAIDMGL
                     GSGKATVWTCDLTHGYIDINGSYRS"
     gene            complement(1385..2287)
                     /locus_tag="VHX39_24340"
     CDS             complement(1385..2287)
                     /locus_tag="VHX39_24340"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX3994314.1"
                     /translation="MTPDTALASRNAARLFAIGLLAAGLTAVPFRASSWADDKPDPVV
                     AKIGTDVIHLSDVTAMVGTLPPQARQMPPDQLLPRVLDQMIDTQVLATEARKKGVDKD
                     PVVERTLHEVAERALVSAYLEREVGPQITDAAVKARFDKDNGSQKAVQEVHARHILVD
                     DEATAKKIIADLKKGGDFAALSKQYSKDAAAVEQGGDLGYFKATDMVPEFSAAAFALK
                     DNEISSTPVHTQFGWHVIQTLDHRTAAPPTFEQSKDQLRQKMINEAVHKVLTQAQADV
                     PVERFNLDGSPAKATDQAMPPPAK"
     gene            complement(2384..3928)
                     /locus_tag="VHX39_24345"
     CDS             complement(2384..3928)
                     /locus_tag="VHX39_24345"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEX3994315.1"
                     /translation="MAATPHYDWIAYHANTRGDHTAMVDLATGRSFTYAQFHDRVGRL
                     ASGLRSAYGVKRGDRVGVLAHNSSDLFEIQFACARLGAVFVPMNWRLTVPELTYIVTD
                     CSPVVLMHDAEFEDAALKLAAACGVPHLHPRVNAYERLLASAETDVTPESLTHDDTAA
                     LLYTSGTTGHPKGAIITHGMRFWQTVNLTGPERLTADSVCLVTLPLFHVGGLDVYANP
                     LFHFGGKVLVMRGFDPADTLRLFTDPAAGLTHYIGAPAHYLFMAQLPEFESAKFSRNL
                     LACIAAAPVPLPQLRQWEDRGLPLLQGYGMTETCGVITMMEPEDRVRKAGSAGKACLH
                     VTLRLVRVDGTEAAPGEMGEVWVQGPSLTPGYWKNDAANQSAFIDGWFRTGDAAMIDD
                     EGFYFIVDRWKDMYISGGENVYPAEVEEVLFKLDGIAEVAIIGVPDERWGEVGRAIIS
                     ITPGYNLTEADVMRHCDGKLARYKQPRSVRFVDALPRNATGKVHKPTLRQLHGEADEP
                     SSINVR"
     gene            4039..>4437
                     /locus_tag="VHX39_24350"
     CDS             4039..>4437
                     /locus_tag="VHX39_24350"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3994316.1"
                     /translation="MSDLTTFRAESRAWLEANCPPVMRTRMPDEEQVAGGKRARYVRP
                     EQKLWLDRMAKKGWTAPTWPTKYGGGGLSGDEALILEEEMQDLGCRAPLRGMGLSMLG
                     PVLLEYGTEEQRQQHIPPIVRGEIRWCQGYS"
BASE COUNT          814 a         1428 c         1360 g          835 t
ORIGIN      
        1 atcttgccgg gatggatttt gtattggcgc atctcgtaga aagccatggc ggagtttccc
       61 caaaagttca cagccgaacg ataccgtctc gccgaagcgg cgtcgagtta cgaccggtac
      121 gacccgttga tgtcgatgta accgtgcgtc agatcacagg tccacacagt ggctttgccg
      181 gaacccaacc ccatatcgat cgccatctcg atctcacggc ctttcatgtg cgcaacgacc
      241 ggggtctcgt catagcccgg gatcacgccg ccctcgcgcg ccatccatac gccgccgacg
      301 ccgatcgaca gccgatcgcg gtccgccggc tcgcctgcct tgccgaccgc catcacgatg
      361 cggccccagt ttgcatcctc gccggcgatt gctgtcttca ccaacggtga gtttgccaca
      421 gtcatggcaa tccgtttcgc cgaccgagca gacaccgccc cggtgacatc gatccgcaca
      481 agcttctgcg cgccctcgcc atcgcggatc acctgcagcg caagatccat cagcacttcc
      541 gacagcttcg tcgagaaatc cgtcaatgca gcggcgggat ttcgggcctg tccggtggcg
      601 atcaacagca ccgtatcact ggtagaagta tccgagtcca ccgtcgtaca gttgaagctg
      661 cgatcaacgc ctttcttcag catcgactgc agtgaagcac ccgggattgc cgcatcggtg
      721 aacacgaagc aaagcatcgt tgccatgtcg ggcgcgatca taccgctgcc tttggcgata
      781 ccggtgatcc gcacctcggt gccgccgatc ttcgccaccc gcgtcgacgc tttcgggaac
      841 gtatcggtcg tcatgatgcc gcgagcggct gcctcccagc cgtctgaact cagtcccgca
      901 tgcagggccg gcaacgcggc gatcagtttg tcatgcggca gcacttcacc gatcacgccg
      961 gtcgaggcga caaagacttc cgacggcgcg caatcgacca gccgagcggc agctgcagca
     1021 gttgcggcac aggtctcgcg gcccgctcgc ccggtaaaca cgttggcatt gccggcattc
     1081 accaccacca tgcgggcctt acctccggcc aacgcatccc ggcaccaatc caccggcgcg
     1141 cccgggcatt tgttggaggt gaacacacct gctgctgtgc tgcccgccgg cacctccatc
     1201 atcaccagat ccgttcgccc caggtatcga attcccgctg ccgtcgcatt aagtcgtacg
     1261 ccggccaacg acggtagctc cggcaacccc actgcgagcg gcgaaacccc gggaccgttc
     1321 ggtttccacg caccttcggc gggagagcca gcatttgtca tgcgttccgt tcctctggtg
     1381 cgcgttattt cgcgggtggc ggcatcgcct gatcggtcgc cttggccgga cttccgtcca
     1441 gattgaatcg ctcgaccggc acgtcggcct gcgcctgggt gagcaccttg tgcaccgcct
     1501 cattgatcat cttttggcgt aactgatcct tggactgttc gaatgtcggc ggcgccgcgg
     1561 tgcggtgatc gagcgtttgg attacatgcc agccgaattg cgtgtgcacc ggcgtagaac
     1621 tgatctcgtt atccttcaac gcgaaagccg cggcagagaa ctccggcacc atatcggtcg
     1681 ccttgaagta gccgaggtca ccgccttgct ccactgcggc ggcgtctttg ctatattgtt
     1741 ttgacagagc cgcaaagtcg ccacctttct tcaggtcggc aatgattttc ttcgcggtcg
     1801 cctcatcgtc caccaggatg tgacgggcgt ggacttcctg gaccgctttc tggctgccgt
     1861 tatccttgtc aaatcgcgcc ttcaccgcgg cgtcggtgat ctgtggcccg acttctctct
     1921 ccaggtatgc ggagaccagc gcgcgctccg ctacctcatg cagcgtgcgc tcgacgacag
     1981 ggtccttatc gacgcctttc ttgcgggcct cggtcgccag cacctgggtg tcaatcattt
     2041 gatccagcac tctgggcagt aactggtctg gtggcatctg acgcgcctgc ggtggcagag
     2101 tgcctaccat ggcagtcaca tcgctgaggt gaatgacatc ggtgccgatc ttggccacca
     2161 cggggtcagg cttgtcgtcg gcccaggagg aggcccggaa aggaactgca gtcaggccgg
     2221 cagccagcaa gccgatggcg aaaagccggg cggcgttccg gctggcgaga gccgtgtcag
     2281 gtgtcatcga gacctcagaa aggaagaatg aggccggctt atggcggaat gcccccctgg
     2341 gcacaaggtt cggggggctg gcggccgatt cgctgcgcgg aattcatcgc acgttaatgg
     2401 aggagggctc gtccgcctcg ccgtgcagtt gccgcagcgt cggcttgtgc accttgccgg
     2461 tcgcattgcg cggcagagca tcgacaaatc tgaccgagcg cggctgtttg taacgggcca
     2521 gcttgccgtc gcaatgccgc atgacgtcgg cctcggtcag gttgtagccc ggcgtaattg
     2581 agatgatggc acggccgacc tcgccccagc gttcgtcggg gacaccgata attgccacct
     2641 cggcgatgcc gtcgagcttg aacaacactt cttctacttc ggccggatag acgttctcgc
     2701 cgccggagat gtacatgtcc ttccagcggt cgacgatgaa gtaaaaccct tcgtcatcga
     2761 tcatagcagc atcaccggtg cggaaccagc cgtcaatgaa cgccgactgg tttgctgcat
     2821 cgttcttcca atatcctggc gtcagactgg ggccctggac ccatacttcg cccatctcgc
     2881 cgggtgcggc ctcggtgcca tccacccgaa ccagccgcag cgtcacgtgc aagcaggcct
     2941 tgcccgccga gccggccttc cgcacgcggt cttccggttc catcatcgta atgacgccgc
     3001 acgtctccgt catgccgtag ccttgtaaca atggcagccc gcggtcctcc cactggcgca
     3061 gttgtggcaa cggcactggc gcggcggcaa tgcaggccaa caggttccga ctgaactttg
     3121 ccgattcgaa ctccggcagt tgcgccatga acaggtaatg tgccggggca ccgatatagt
     3181 gcgtcaggcc ggcggcgggg tcggtaaaca ggcgcaacgt atcggcggga tcgaagccgc
     3241 gcatcaccag caccttgcca ccgaaatgaa acagtggatt ggcgtaaacg tcgagcccgc
     3301 cgacatgaaa cagcggcaag gtgacgaggc acacgctgtc ggcggtcaac cgctccggtc
     3361 ccgtcaggtt gacggtctgc cagaaccgca tgccgtgggt gatgatcgcc cctttgggat
     3421 ggcccgtggt gcccgacgtg tacagcagcg ccgcagtatc gtcatgggtc agcgactctg
     3481 gcgtcacatc ggtctccgcc gaggcgagca accgctcata ggcgttgacg cgggggtgca
     3541 aatgcggcac cccgcaggca gcggcgagtt tcagcgcggc atcctcgaat tccgcatcgt
     3601 gcatcagcac aacgggcgag caatcggtga cgatataggt caactcaggc accgtcaggc
     3661 gccagttcat cggcacgaat accgcgccga ggcgagcgca ggcgaactgg atctcgaaca
     3721 gatcggagga gttgtgggca agcacgccga cccggtcacc gcgcttcaca ccgtaagccg
     3781 aacgcaggcc ggaggcgagc cggccgacac ggtcgtggaa ctgcgcataa gtgaacgacc
     3841 ggccggtggc gaggtcgacc atcgcggtgt ggtcgcccct tgtgttggcg tgataggcga
     3901 tccagtcata gtgcggcgtt gctgccatgg ttgcctccca ttttcccgcc atttgacacc
     3961 aatccggcgg caaagcccag ggacttgacc cgggtcgtgg ttcggggaga gtggccgtgt
     4021 gttgccgggg gaaaccgcat gtccgacctg accaccttcc gcgcggaatc ccgcgcatgg
     4081 ctcgaagcca attgcccacc cgtgatgcgc actcgcatgc cggatgagga gcaggtcgcg
     4141 ggcggcaagc gcgcgcgtta cgtgcggccg gaacaaaagc tctggctcga ccgcatggcg
     4201 aagaagggct ggaccgcgcc gacctggcca acgaaatacg gcggaggcgg cttgtcgggt
     4261 gacgaagcgc tgatcctgga agaagaaatg caggacctcg gctgccgggc gccgttacgg
     4321 ggcatgggac tgtcgatgct gggcccggtg ctgctggaat acggcacgga ggagcaacga
     4381 cagcaacaca tcccgccgat tgtgcggggc gaaatccgct ggtgccaggg ctattcg
//
LOCUS       DATAVD010001280         5064 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1421965, whole genome shotgun sequence.
ACCESSION   DATAVD010001280 DATAVD010000000
VERSION     DATAVD010001280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5064
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1421965"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..549)
                     /locus_tag="VHX39_24355"
     CDS             complement(<1..549)
                     /locus_tag="VHX39_24355"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3994317.1"
                     /translation="MPVNIPRLVYFENFMNPIAVSMLSGRDDLDLVRLEYAAPVDENL
                     TEMRRAHGYQIQPRTELREPWFGDAALLADCPNMLAISSTGAGYDMIDVDDCSKAGVI
                     VLNQSGTNKEGVAEHALGLILSLSKKIAVSERAMRTVRNLDRRIYEGNDIRGETLGII
                     GIGNIGTRVAELCRGLFQMTVLA"
     gene            complement(558..1394)
                     /locus_tag="VHX39_24360"
     CDS             complement(558..1394)
                     /locus_tag="VHX39_24360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007284142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3994318.1"
                     /translation="MTYDTIGVTPVTPTIGAEISGIDLSRPLGNQQFQEVHDALMAHQ
                     VLFFRDQKLTLDQHKAFGRLFGELAVHPNTRGPEGHPEILPVHADANSKRIAGERWHS
                     DVSCDPEPPMGSILNLKTIPPNGGDTLFCSMYAAFDALSAPMQKFLCGLTAIHDGAPN
                     YSRTNKLIGDAAEKTFPRAEHPVIRTHPVTGKQAVFVNPVFTVAIKDVPEAESKAILE
                     FLYEHCARPHWQVRFRWQADSVAFWDNRCVQHIAMWDYFPQVRSGFRVTVKGDKPFHR
                     AN"
     gene            complement(1461..2555)
                     /gene="ychF"
                     /locus_tag="VHX39_24365"
     CDS             complement(1461..2555)
                     /gene="ychF"
                     /locus_tag="VHX39_24365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019086085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEX3994319.1"
                     /translation="MGFNCGIVGLPNVGKSTLFNALTATAAAQAANYPFCTIEPNVGR
                     VAVPDNRLDVLAAIGKSAKIVPTSLEFVDIAGLVRGASKGEGLGNQFLANIREVDAII
                     HVLRCFEDSDITHVEGSIDPVRDAEVVETELMLADLESLEKRLLAAQKKARGGDKESI
                     AAVALMEPLVSVLQDGRPARTAIPRGQEEAVRRLQLLTSKPVLYVCNVEESAAASGNA
                     FAAAVAVRAKQEGASCVIVSAAIEAEVAQLPIADQAEFLEGLGLHDSGLDRVIRAGYD
                     LLGLVTYFTCGPKETRAWTITKGTKAPQAAAVIHKDFERGFIACETIAYDDYVAGNGE
                     AGARETGKLRIEGKDYVVKDGDVLLFRFNV"
     gene            complement(2642..3745)
                     /gene="ugpC"
                     /locus_tag="VHX39_24370"
     CDS             complement(2642..3745)
                     /gene="ugpC"
                     /locus_tag="VHX39_24370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HEX3994320.1"
                     /translation="MAEVSCRRIVKEYDGGVQAVKGIDLDIADEEFVVLVGPSGCGKS
                     TTLRMIAGLEEITGGEILIAGEVVNDVPPRDRDIAMVFQNYALYPHMSVFDNMAFGLK
                     LRKFPKDEIKRRVDEAARILDIGTLLDRKPRALSGGQRQRVAMGRAIVRNPKVFLFDE
                     PLSNLDAKLRVQMRTEIKKVHQTVKTTTVYVTHDQVEAMTLADRVVVMNAGVIEQVGT
                     PQELYHNPATRFVAGFIGSPAMNFLPCQIVEGSGGGIAVRVNEQIVLPVPPARVERYR
                     PFKGKPMVFGMRPEHLFEYHEQGRPGWERVDLKVDVVEPMGMETMVHFFLGSDPICAR
                     VAPETEAHPEQVLALTADMNNMHLMDADTGRVV"
     gene            complement(4303..>5064)
                     /locus_tag="VHX39_24375"
     CDS             complement(4303..>5064)
                     /locus_tag="VHX39_24375"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF019174.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEX3994321.1"
                     /translation="LQDSRPIRLLGASIDVTDRKRYEQHLRFLLRELSHRSKNLLAVI
                     QAMATRTARSAETVDDFRRRFGERLMGLAASHDLLVNQNWLGVSVENLVRGQLSAFLE
                     PHDPRVQIHGPNIDLKAEAAEALGLALHELATNSVKYGALQDTAGTVEIGWTVSGSRE
                     ANVPGHSSEVRRFRMEWIEHTVDPISPPTRKGFGRMVIEHTVEATLGGTVTLDFPPEG
                     LRWCIDAPATCLAPAGSAATELPRGAGREAGAVRS"
BASE COUNT          991 a         1626 c         1465 g          982 t
ORIGIN      
        1 ggccagaacc gtcatctgaa acagaccgcg gcacagttcg gcgacccggg tcccgatgtt
       61 gccgatgccg ataataccta gcgtctcgcc gcgaatatcg ttgccttcgt aaatccgccg
      121 gtccagattc cgaaccgtcc gcatcgcccg ttccgagacc gcgattttct tcgacagcga
      181 caagatcaaa ccgagcgcgt gctcagcgac accctccttg ttggtgcccg actggttgag
      241 cacgatcaca ccggctttgc tgcaatcatc gacgtcgatc atgtcatagc cggcgccggt
      301 cgaactgatc gcgagcatat tcggacagtc cgccagcagt gcggcatcac cgaaccatgg
      361 ttctcgcagc tcggtgcgcg gttgaatttg gtagccatgg gcgcgacgca tttcggtcag
      421 gttttcatcg accggcgcgg cgtattccag ccgcaccaga tcgagatcgt cacggccgct
      481 caacatcgag accgcaatag ggttcatgaa gttctcgaaa tagacgagtc gcggaatgtt
      541 gaccggcatg ccgctgctca gttcgcgcga tggaacggct tgtcaccctt caccgtcacg
      601 cggaagccgg accgaacctg cgggaagtaa tcccacatgg caatgtgctg cacgcaccga
      661 ttgtcccaga acgcaacact atcggcttgc cagcgaaaac gaacctgcca gtgcgggcga
      721 gcgcaatgtt cgtacaggaa ttccaggatc gccttgctct cggcttccgg aacatccttg
      781 atggcaacgg taaacaccgg attgacgaac accgcctgct taccggtcac cggatgggtg
      841 cggatcaccg ggtgttcggc tcgcggaaac gttttctccg ccgcgtcgcc gatcagcttg
      901 ttggtgcgtg aataattggg cgccccatca tggatcgcag tgagaccgca gaggaacttt
      961 tgcatgggcg ccgacagggc gtcaaaagcc gcatacatgc tgcaaaacag cgtatcaccg
     1021 ccgttcggcg gaatggtctt caggttcagg atcgaaccca tcggcggttc gggatcgcag
     1081 gacacgtccg aatgccaccg ttccccggca attcgtttcg agtttgcgtc ggcatgcacc
     1141 ggcagaattt ccgggtgacc ctcgggtccc ctggtattgg gatggaccgc cagttcacca
     1201 aacaaccggc caaacgcctt gtgctgatcc aaggtcagct tctggtcgcg gaagaatagc
     1261 acctgatgcg ccatcagtgc gtcgtgcact tcctggaact gctgattgcc cagtgggcgg
     1321 gagagatcga tgccggagat ttcggctccg atggtggggg tgacgggtgt gaccccgatc
     1381 gtatcatacg tcatggcgaa ctccgttcct ggctggttgc cgccgagcat gcccgttacc
     1441 ggccagctcg gcaaaccgag ctacacgtta aagcgaaata ataaaacgtc gccatccttg
     1501 acgacgtagt ccttgccttc gatgcgcaat tttcccgtct cgcgtgcacc cgcttcgcca
     1561 ttgccggcaa cgtaatcgtc gtacgcgatc gtttcgcaag cgatgaagcc acgctcgaag
     1621 tctttgtgga tgacggcggc agcctgcggc gctttcgtgc ccttggtgat ggtccatgcc
     1681 cgggtctctt tcggaccgca ggtaaagtaa gttaccaacc ccaacaaatc atagccggca
     1741 cggatgaccc gatcgagacc ggaatcgtgc aagcccagac cttcgaggaa ttccgcctgg
     1801 tcagcaatcg gaagttgcgc gacctcggct tcgattgctg cggaaacgat cacacagctt
     1861 gcaccttcct gctttgctcg gaccgcgaca gcggcggcga acgcgttgcc ggatgcggcg
     1921 gctgattcct cgacattgca gacatacagc acgggtttcg aggtcagcaa ttgcagccgg
     1981 cgcacagcct cctcctggcc gcgtgggatt gcggttcggg ccggcctgcc atcctgcaac
     2041 acagagacca gcggctccat gagggcgacc gcggcaatgc tttccttgtc gccaccgcgc
     2101 gccttcttct gcgccgccag caggcgcttt tccaaactct cgagatcggc cagcatcaat
     2161 tccgtttcga ccacttcggc gtcgcgcacc ggatcgatcg agccctcgac atgggtgatg
     2221 tcgctgtcct caaaacagcg caacacgtgg atgatggcgt cgacttcgcg gatattggcg
     2281 aggaactgat tgcccagacc ctcacccttg gacgcaccgc gcacaaggcc ggcaatatcg
     2341 acaaactcca acgaggtcgg cacgattttg gcggacttgc cgattgcggc gagcacatcc
     2401 agccgattat cgggcactgc aacgcgtcca acattcggct cgatggtgca gaatgggtag
     2461 ttcgctgcct gcgccgcggc ggtggccgtc agcgcattga acagagtcga tttgccgacg
     2521 ttcggcagcc caacgatccc gcagttaaaa cccatgctcg cgtccctggt ggcccaatcg
     2581 gcgcggtcat acgcgggccg gtgccaaggg gcaatcgctt agccagcaac gcccctgggg
     2641 gtcagaccac ccggccggta tcggcgtcca tcaagtgcat gttgttcata tccgccgtca
     2701 gcgcgagaac ctgctcggga tgcgcctcgg tttccggcgc cacgcgagcg cagatcgggt
     2761 cactgccaag gaaaaagtgc accatggttt ccatacccat cggctcgacc acgtcgacct
     2821 tcaggtccac cctctcccag cccgggcggc cctgttcgtg atattcgaac agatgttccg
     2881 gccgcatacc gaacaccatt ggcttaccct tgaacggccg gtagcgctcg acacgggccg
     2941 gcgggaccgg caggacaatc tgctcgttca cccgcaccgc aatgccccca ccgctgcctt
     3001 ccacgatctg gcacggcagg aagttcatcg ccggagaccc gatgaacccc gcaacaaacc
     3061 gggtcgccgg gttgtggtaa agttcctgtg gcgtgccgac ctgctcaatc accccggcgt
     3121 tcatcacgac cacgcgatcg gcgagcgtca ttgcctccac ctggtcgtgc gtcacataaa
     3181 ccgtggtggt cttgaccgtc tgatgcacct ttttgatctc ggtgcgcatt tgcacgcgca
     3241 gcttggcgtc caggttggac aacggctcat cgaacaggaa cactttgggg ttacgcacga
     3301 tggcccggcc cattgcgaca cgctggcgtt gaccaccgga caaagcgcgc ggcttgcgat
     3361 ccagcagtgt gccgatgtcg aggatgcgtg ccgcctcatc gacccggcgc ttgatttcgt
     3421 ccttgggaaa cttgcgcagt ttcaggccga acgccatgtt gtcgaacacg ctcatgtgtg
     3481 gatacagcgc gtaattctgg aacaccatgg cgatgtcgcg gtcgcgcgga ggaacgtcgt
     3541 tgacgacctc cccggcgatc agaatttcac cgccggtgat ttcctccagg ccggcgatca
     3601 tgcgtagcgt ggtggacttg ccgcaaccgg agggtccgac cagcacgacg aactcctcgt
     3661 ccgcgatgtc gaggtcgatg cctttcaccg cttgtacgcc gccgtcatat tccttgacga
     3721 tcctgcggca cgagacttca gccattttgg ttcgtttcct caataaaaac ccccttggcg
     3781 ggatgcccgg gggtgcgttg cggggtcaga atttggttgc tccgggtgtc aggccggccg
     3841 cgttgtgggc cctcaggaac gtaacaatga cgccaggcga aaggcaaagc ataaaagcca
     3901 cgctcgacct gggtcgtgcg cataaattca acgacccggt tcgccacgcc ttgcggggcg
     3961 ccgaggcgat cataccaacc ggtcggctca tgccgtccgc catccgtccc tcctgaccgc
     4021 tgcccttctc cggcatacgg tttgaccgcg accaaaggcc aaaaccaggc gccgcgtcgc
     4081 ggtgctgaag cgtggcctgt cgccgcggaa taacccacca tcgtaggcgc aatacgcggg
     4141 ccaaagtaat ccccccggca ccgggcgcat cgatccctat tgcctgtcaa tccggactac
     4201 cgcaagcgca cagcaatcct ggcgaaaaca tataactatc gtcccgacgc taatggctgg
     4261 ctccgggcag tgcaacagct ttcgcgcatc gatgcagttg cttcaggatc gaaccgcacc
     4321 ggcttccctc ccggcccccc tgggcaactc ggtcgcggcg ctgcccgccg gcgccagaca
     4381 cgtggccggc gcatcaatac accagcgcaa accttcaggc ggaaaatcca acgtaaccgt
     4441 cccgccgagc gttgcttcca cggtatgttc aatcaccatc cggccaaagc ccttgcgggt
     4501 gggaggagag atgggatcga cggtgtgttc gatccactcc atacgaaatc gcctgacttc
     4561 ggaggaatga cccgggacat tcgcctcgcg cgatccggag acggtccagc cgatctcgac
     4621 ggttcccgcc gtgtcctgca acgcaccgta cttcacggaa ttggtcgcga gttcgtgtag
     4681 ggcaaggccc agagcctcgg ccgcctcagc tttcagatcg atgttgggcc cgtggatttg
     4741 cacacgcgga tcgtgcggct cgaggaaagc cgacagttgt ccccgcacca aattctcgac
     4801 cgacacgccc agccagttct gattgaccag caggtcgtgc gaggcggcaa ggcccatcaa
     4861 ccgctcgccg aagcgccgcc ggaaatcatc gaccgtctcc gccgacctgg ctgtccgggt
     4921 tgccatcgcc tggatcaccg ccagcaggtt tttcgaacga tgcgaaagtt cgcgcagcag
     4981 aaaacgcaaa tgctgttcgt atcgcttgcg atcggtgacg tcgatgctgg cgcccagaag
     5041 gcggatcggc cggctgtcct gcag
//
LOCUS       DATAVD010001281         8409 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3097492, whole genome shotgun sequence.
ACCESSION   DATAVD010001281 DATAVD010000000
VERSION     DATAVD010001281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8409
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3097492"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VHX39_24380"
     CDS             <1..216
                     /locus_tag="VHX39_24380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994322.1"
                     /translation="PLSGGVGNGGVSQPERMPGQRADLPAGSLPGPYLGPQGDENRAP
                     PSNVPSPVKPAVTVATPVADRKDYRQE"
     gene            389..946
                     /locus_tag="VHX39_24385"
     CDS             389..946
                     /locus_tag="VHX39_24385"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3994323.1"
                     /translation="MTAVLVAERDPGICDLLTDVLEAEFAAIVRCERTGSRAMQAIET
                     AGFDLAIIDANMPEVSGYELARLAANRNIPTLLSSGHPDADSRLRGSECPYLAKPYRI
                     VDLTSEAAYAITHATENIRRVKASLDRLAAATEGLQAEIAKSRRLVNESKAILARCRP
                     ADPAFPLDAVGDWLGRLSSGPKRAR"
     gene            1123..1362
                     /locus_tag="VHX39_24390"
     CDS             1123..1362
                     /locus_tag="VHX39_24390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994324.1"
                     /translation="MVQKNVPPPELSPKGPLEARLRYVGGVYRAEYPGEINPTDPDER
                     EIPDYHIGSDPDEVRNWVEEMARGMGYSEVRWMEA"
     gene            complement(1468..3066)
                     /locus_tag="VHX39_24395"
     CDS             complement(1468..3066)
                     /locus_tag="VHX39_24395"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX3994325.1"
                     /translation="MLDRVDVVIIGAGASGGAVAWSLAETKMRIVCLEQGDWTKPTDY
                     PSNGRDWEARQLGEFNYSPNRRARVTDYPINEDDSAIRVANFNGVGGGTVLYAGHYPR
                     FHPSDFRVRSLDGVADDWPIDYETLAPYYAENDRMTGVSGLAGDPAYPPKQPMMPPLP
                     LGKSGTTLARGLNRLGWHWWPSDSAIASTDYEGRAKCINLGHCTGGCAQGAKASSDIT
                     YWPLAIRAGVELRTRCRVREITTNDQGMASGVVYYDADGIEQFQPAEVVILACNGIGT
                     PRILLNSVSSRFPNGLANSSGQVGRNLMFHPYARVWGYFDAFMDGYKGPGNCIWSQQF
                     YETDPSRDFVRGYTYEFSRGQGPVLAAIQGMGTGRIPWGEAHHDAYRKLFCHRTGMVG
                     ICEDLPEEHNRVTLDPTLKDSNGIPAPKITYTLSENSRRMLDHAVARGTEILKAAGAY
                     DIGSEAPLADGGWHLMGTARMGKDPERSVVNEWGRSHDVKNLFVVDGSLFVTSAGVNP
                     TCTIQALALYVADNMKQRLATLFD"
     gene            complement(3329..5998)
                     /gene="ligD"
                     /locus_tag="VHX39_24400"
     CDS             complement(3329..5998)
                     /gene="ligD"
                     /locus_tag="VHX39_24400"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF004628.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HEX3994326.1"
                     /translation="MIETDNQLTRYRGKRDFEKTAEPSGVAEVKPSNRGRFVIQKHAA
                     SRLHYDLRIELDGVFKSWAVAKGPSLDPADKRLAVEVEDHPLDYGDFEGTIPKGQYGG
                     GTVMLWDRGYWEPEGDRPPEEALAKGDFKFRLDGGKLHGSWVLVRMRWGKDTGKKNWL
                     LIKHRDDAAREGDADALLAQDKSIASARSMEAIAAGKGRGPKPFMLAVQDAADPDAVW
                     DSRHGLAADERKQRSAPPRRKSGPKKAVPKDATAMPDFIPPQLCETGERPPSGSGWIH
                     EIKFDGYRMQLRVQDGKATLRTRKGLDWTSRFGAIARAAKDLPDCIVDGEVVALDEVG
                     APDFASLQAALSEARTDDLVYYAFDLLFDGQDDLTKAPLSERKARLDRRLKALGDATL
                     IRYSEHFDTGGDAVLRSACKLSLEGIVSKRLDAPYRSGRGHGWIKAKCRAGHEVVIGG
                     WLTTGSRFRSLLAGVHRGAHLIYVGNVGTGYGEAKLRTLLPALKAAESETSPFAGIGA
                     PKKASNTHWVKPDLVAEIEYAGWTGDGQLRQASFKGLRSDKPADEVEAETPAPAEATE
                     APDLDQAPKQPAPAVRRGQSTKDVVMGVVLTHADKVFWPDTGDGGPVTKADLARYFET
                     IGNWMLPHIQGRPCSIIRAPDGITGEQFFQRHASRGLSNLIEQVKVSGDRQSYIQIDR
                     VEALAAIAQMGGLELHPWNCQPKQPEVPGRLVFDLDPDPDLPFSEVVSAANEMRGILE
                     ALGLVSFCKTTGGKGLHVVTPLSVAKRSKPGWPEAKAFAREVCVRMARQAPNRFVVNM
                     AKKVRSGKIFLDYLRNDRMSTAVAPLSSRARPGATVSMPLTWSQVKPDLDPRRYTVRT
                     VPGLLAKTKAWKEYCDTEQPLDAAIKRLSASKP"
     gene            complement(6330..6704)
                     /locus_tag="VHX39_24405"
     CDS             complement(6330..6704)
                     /locus_tag="VHX39_24405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX3994327.1"
                     /translation="MAQVEDPSNTGGSLIAASKVNGTNVYDTAGEKVGSIYDVMIDKR
                     TGNTAYAIMSFGGFLGIGDRYHPLPWKSLTYDESQGGYIVNIDRSRLEGAPAYAAGDP
                     DRWADPDYGREVNDYYGVTTLY"
     gene            6725..6877
                     /locus_tag="VHX39_24410"
     CDS             6725..6877
                     /locus_tag="VHX39_24410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994328.1"
                     /translation="MRRAIMPIRPGFDPFAHLAKPVTQADGDRKPQASAVSFITIPAG
                     DAALIA"
     gene            complement(6914..8122)
                     /locus_tag="VHX39_24415"
     CDS             complement(6914..8122)
                     /locus_tag="VHX39_24415"
                     /EC_number="5.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF008277.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016857 - racemase and epimerase activity,
                     acting on carbohydrates and derivatives [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldose epimerase family protein"
                     /protein_id="HEX3994329.1"
                     /translation="MKALIAASCLALAAACAPAVAAKLTTEPFGTTQDGNAVTITTMT
                     ARDGLTVRFISYGGRITQIIAPDRQGHLADVVLGYPTLTQYESALPTGGPFFGALIGR
                     YANRIANGRFTLDGHAYTLPINNAPNSLHGGPQGFDKKIWTVQPLRTSGQSVSATLRL
                     TSPDGEAGFPGTLNLTVTYTLDDSGAFRIDYHATTDKDTVLNLTNHSYFSLAGVGAPD
                     GVENEMLTIDADRFTPTDATGIPTGQLAPVAGTPFDFRSPHKIAERIRDDNQQLLWAH
                     GYDHNWVLNKSGDPSTPQLAATIYDPATGRTLECLTTQPGIQVYTGNALAGQFAGYGG
                     LYRQTDAVTLETQHFPNSPNEPNFPTTELKPGQVFQSTTIFRFGVRHGSDGPEKTPRI
                     HASGRSAPSL"
BASE COUNT         1488 a         2675 c         2598 g         1648 t
ORIGIN      
        1 cccctgtccg gcggcgttgg taacggcgga gtgtcgcaac cggagcgcat gccgggacag
       61 cgcgccgacc tgcccgcggg cagcctgcca ggcccttatc ttggaccgca gggcgacgag
      121 aacagggcac cgccgtcaaa cgtcccttcg ccggtcaagc cggcggtcac ggtggcgacg
      181 ccggtcgccg atcggaagga ttaccgacaa gaatgaccgg tcgatacggc aacgcaccgc
      241 gagagaacgt tctcatcagt ggaaaccaga ggccggcggc atcatttgca attcccgttt
      301 ctaaatgaga acgtaactgg atgatattga ccgcttggcg gactggtcgg agcggtgtag
      361 ccttcgcgcc ttcaatgtgg tgaaggtcat gacagcggta ttggtggccg aacgcgatcc
      421 cggcatttgc gaccttttga ccgacgttct tgaggctgaa tttgccgcaa ttgtgaggtg
      481 cgaacgaacc ggaagccgag ccatgcaggc catcgagacc gcgggttttg atcttgcaat
      541 catagacgcg aacatgcctg aggtttccgg ttatgagctg gcaaggctcg cagccaaccg
      601 gaacatcccc acgctgcttt ccagcggcca ccccgatgcc gactccagac ttagagggtc
      661 tgaatgtccc tatctggcca agccgtatcg gatcgtcgat ctgacctccg aggccgcgta
      721 tgccatcact cacgcaaccg agaacattcg tcgcgtcaaa gcgtccctcg acaggctggc
      781 agcggccacc gaaggcctgc aagctgaaat tgcaaaatcc cgtcggctcg tgaacgagag
      841 caaggccatc ctcgccaggt gccggccggc agatcccgca tttccgttgg atgccgtggg
      901 cgattggctt ggccgactga gctcgggacc gaaacgcgct cgctgagcgg ataccgcggt
      961 cctcgctgtt tcacacaagc tggttctgac gccggggcgt ggtcgctatg cggacatcgg
     1021 cgcgccgaaa ctcggttttt ggcgcccggt cggctgcgaa gcttttcaat gcaacggccg
     1081 gccggccgga gagttgaagc ctcgtataag caggagtgaa ccatggtaca gaaaaacgtg
     1141 ccgccgcccg agctgtcccc caaggggccc ctcgaggctc ggcttcgcta tgttggtggg
     1201 gtctatcgtg cggaataccc tggtgaaatc aatccgaccg atccggacga gcgggaaatc
     1261 ccggactatc atatcggttc cgacccggat gaggtgcgga actgggttga agagatggcg
     1321 cgggggatgg gctattcgga agtaaggtgg atggaagcgt agcggccgta tacaaaccac
     1381 gtttgttgat tgcgcagact tgcgtttctt ccgcatccgt caggatggac cggatctcgt
     1441 cagccgccac gctttgcacc gtctgcctca atcgaacagc gtggcgagac gctgcttcat
     1501 gttgtccgcg acatacaatg ccagcgcctg gatcgtgcag gtcgggttca cgccggcgga
     1561 ggtcacgaac aggctgccat cgacaacaaa gagattcttc acgtcgtggc tgcggcccca
     1621 ttcattgaca acggaacgtt ccggatcttt acccatgcgt gccgttccca tcagatgcca
     1681 gccgccatcc gccagcggag cctcggaccc gatgtcatag gctccggccg ctttcaggat
     1741 ctcggtaccg cgagcaacgg cgtgatccag catgcggcgg ctgttttcgc tgagggtgta
     1801 ggtgatcttc ggcgcgggaa tcccgttgct gtccttcagg gtcgggtcca gggtcacccg
     1861 gttgtgttcc tcgggcaggt cttcgcaaat acccaccatt ccggtccggt ggcagaacag
     1921 tttgcggtag gcgtcgtggt gcgcctcacc ccacggtatg cgcccggttc ccatgccctg
     1981 gatcgctgcc agcacgggac cctggccgcg ggaaaattcg taggtgtagc ctcggacaaa
     2041 gtcgcgtgag ggatcggtct cgtagaattg ctggctccag atacagtttc ccgggccttt
     2101 atatccgtcc atgaatgcat cgaaatagcc ccacacgcgg gcatacggat ggaacatcaa
     2161 attccggccg acctgcccgc tggaattggc cagtccgtta ggaaaccgag acgatacgga
     2221 gttcagcagg atacgcggcg tgccgatccc gttgcaggcc agtatcacca cctcggccgg
     2281 ttgaaactgc tcgatgccgt cggcgtcgta atacaccacg ccggaggcca tgccctggtc
     2341 gttggtggtg atttcccgca cgcggcagcg ggttcgcaat tccacacccg ctctgatggc
     2401 cagcggccag taggtgatat ccgaactggc ctttgccccc tgcgcgcagc cgccggtgca
     2461 atgacccaga ttgatgcatt tggcgcggcc ttcgtaatcg gtcgacgcaa tggcgctgtc
     2521 cgagggccac cagtgccagc ccagcctgtt cagcccgcgc gccaaggtcg tgcccgattt
     2581 gcccagcggc agcggcggca tcatcggctg tttcggcgga taggccggat cgcccgccaa
     2641 cccggaaacc ccggtcatgc ggtcgttttc ggcatagtac ggcgccagcg tctcgtaatc
     2701 gatcggccaa tcatccgcca cgccatccag cgaacggacc cggaaatcgg acggatgaaa
     2761 gcgcggatag tgtccggcgt acaagacggt gcccccgccg acaccattga aattggccac
     2821 cctgatcgcc gagtcatcct cgttgatcgg ataatccgtc acgcgggccc ggcgatttgg
     2881 gctgtagttg aactcaccca gttggcgtgc ttcccaatcg cggccattgc tggggtaatc
     2941 agtgggtttc gtccaatcgc cctgttccag acagacaatt cgcatttttg tttcggccag
     3001 gctccaggcc acggcgcccc cggaggcgcc ggcgccgatg atcaccacat caacccgatc
     3061 gagcattgct gaacgtcccc cgtgcttgcg gaggccagtt agccacgatc ggggcaagca
     3121 tgccaacgac cttgcgcggc ctcccggcct gttcctggtc tcgccgcaag ggtcgcagct
     3181 cgaaaatcgg cggtaccagc cgtgtgcgtc ggctgatcgg gcttagatcg gtccctgcac
     3241 caaaggcggc atcatctgct ccattgtgct gtgccgtggt gccttgtcac cggcagaacg
     3301 aactcggagt ccttcgtctt ctgcagcgtc atggcttcga agcactcagc cgcttgatcg
     3361 cggcatcgag cggctgttcg gtatcgcagt attctttcca ggccttcgtc tttgccaaca
     3421 ggccgggcac cgtccggacg gtgtatcgcc tcggatcaag gtcgggctta acctgactcc
     3481 aggtcagcgg catcgacacg gtggcacctg gacgggcgcg agacgataac ggcgcaacgg
     3541 cggtcgacat ccggtcgttg cgcagatagt ccaggaagat ctttccgctc cggacttttt
     3601 tggccatgtt cacgacgaag cggttcggcg cctgcctggc catgcggacg cagacctcgc
     3661 gggcgaatgc cttggcttcg ggccagccag gtttactgcg tttcgcaacg gatagaggcg
     3721 tcaccacgtg caaccccttg ccacccgtgg tcttgcagaa gctgaccaaa ccgagcgcct
     3781 ccaggatgcc gcgcatttcg ttggcggcgg agacgacctc ggagaagggg agatcggggt
     3841 ccggatcaag gtcgaagacc aggcgtccag gcacctccgg ctgcttcggt tggcaattcc
     3901 acgggtgcag ttccaggccg cccatctgcg cgatggcggc gagcgcttcg acgcggtcga
     3961 tctggatgta cgactggcga tcgccggaca ccttcacctg ctcgatcagg ttggacagcc
     4021 cgcgtgaggc gtgccgctgg aaaaactgct ccccggtgat cccatccggc gctcggataa
     4081 tcgagcatgg ccgtccctgg atgtgcggca gcatccaatt gccgatcgtc tcgaagtagc
     4141 gtgccaggtc ggctttggtg accggaccgc cgtcgccggt gtccggccag aacaccttgt
     4201 cggcatgggt cagcaccacg cccatcacca cgtccttcgt gctctggccg cggcggaccg
     4261 ccggtgccgg ctgcttgggc gcctggtcca ggtcgggcgc ctcggtcgcc tcggccggag
     4321 ccggcgtctc ggcctcgacc tcatcggctg gcttgtcgga ccgcaatccc ttgaagctcg
     4381 cctgccgcaa ttggccgtcg cctgtccagc cggcgtactc gatctccgcg accaggtccg
     4441 gtttgaccca atgcgtgttg gatgccttct tgggcgcccc gatgcccgcg aacggggacg
     4501 tctctgattc cgccgccttg agcgcgggca gcaacgttcg cagcttggcc tcgccatagc
     4561 cggtgccgac gttgccgacg tagatcagat gcgcgccgcg atggacgccg gcgagcaagg
     4621 accgaaatcg gctgcctgtc gtcagccatc cgccgatgac cacctcatgg cctgcccggc
     4681 acttcgcctt gatccagccg tgcccccggc cggaccgata cggcgcgtcc agccgcttgc
     4741 tgacgatgcc ttcgagcgac agtttgcacg cgctgcggag aacagcgtca ccgccagtgt
     4801 cgaaatgttc gctgtagcgg atcagtgtcg cgtcaccgag tgccttcaat cgccgatcca
     4861 ggcgcgcctt ccgttcggac agcggcgctt tcgtcaagtc atcctgacca tcgaacagca
     4921 ggtcgaacgc atagtagacg agatcatctg tccgcgcctc ggacagcgcg gcctgaaggc
     4981 tggcgaaatc gggtgcgccg acctcgtcca gcgccacgac ctcgccatcg acgatgcagt
     5041 ccggcaggtc cttggcggca cgggcgatgg cgccgaacct ggacgtccaa tccaatcctt
     5101 tcctggtcct gagcgtcgcc ttgccgtctt gaacgcgcaa ctgcatgcgg tagccatcga
     5161 acttgatctc atggatccaa ccgctccccg acggcggccg ctcccctgtt tcgcagagct
     5221 gcggtgggat gaaatccggc attgctgtcg cgtccttcgg taccgccttc ttcggtccgg
     5281 atttccgccg cggcggtgct gaccgctgct tccgttcgtc ggcggcaagg ccgtgccgac
     5341 tatcccagac ggcgtcggga tcggctgcgt cctgcaccgc cagcatgaac ggcttcggtc
     5401 cacgcccttt cccggcggcg atcgcttcca tgctgcgtgc ggatgcgatg gatttgtcct
     5461 gcgccaacag ggcgtcggcg tcgccttcac gggccgcgtc atcgcgatgc ttgatcagca
     5521 gccagttctt tttccctgtg tccttgcccc agcgcatgcg gaccagaacc cagctgccat
     5581 gcaacttgcc gccgtcgagc ctgaacttga aatcaccctt ggccagtgcc tcctcaggcg
     5641 gtcggtcgcc ttcaggttcc cagtagcccc ggtcccagag catgaccgtg ccaccgccgt
     5701 actggccctt cgggatcgtg ccctcgaagt cgccatagtc cagcggatga tcctccacct
     5761 ccaccgcgag ccgcttgtca gccggatcga gcgacggccc cttggcgaca gcccaacttt
     5821 tgaacacgcc atccagctcg atgcgcaaat cataatgcag tcgcgatgcg gcgtgtttct
     5881 ggatgacgaa gcgccccctg ttcgaaggct tgacctcggc gacgccgctc ggttccgccg
     5941 tcttctcgaa gtctcgcttc ccgcggtatc gggtgagctg attgtcggtc tcgatcatgg
     6001 gaccctcctg tcagtcgact ggcccgcaat gtataatacc aatcgccctt gatgttgacc
     6061 catcggcacc accatgcaac cgtcatggcg agcgcaggct cgccatccat gcctttgttt
     6121 ccgctcgtaa aaggcgtgga taccggcatg cgccggtgtg acggacgggg tcagtcgaag
     6181 agtctgcatc aacgccggct ggtataacaa caaacaacgc ctcccggcct tcagatagcc
     6241 gggaggcgaa gatgtgtctg ctcgtggtcc gatcccgaca gaagcatccc catgcggtcg
     6301 ggtgaatcgg cccacaagat caaaggcaac tagtacaacg tcgtgacacc gtaatagtca
     6361 ttgacctcac gaccatagtc aggatccgcc caacgatcgg gatcgccagc agcataggcc
     6421 ggagcgccct cgagccgtga tcgatcaata ttcacgatgt agcctccctg agattcgtcg
     6481 taggtcagcg atttccatgg cagcgggtga taccgatcgc caatgccgag gaagccgccg
     6541 aagctcatga tcgcataggc cgtattgccg gtccgcttgt cgatcatcac gtcataaata
     6601 ctgccgactt tctctccggc agtatcatag acatttgttc cattgacctt gctggcggct
     6661 atcagcgaac caccggtatt tgacgggtct tcgacctgag ccatgttcaa ctcctcaaaa
     6721 gtgtatgcgt cgcgcgatca tgccgatccg gccaggcttc gaccctttcg cgcatctggc
     6781 aaaaccggtc acgcaggcgg acggtgatag aaaaccccaa gcatccgctg tgagtttcat
     6841 caccattccg gcaggtgatg ccgcgctgat tgcgtgattg tcgcgcgttg agcccgatgg
     6901 cgggccaggt tcgtcagagc gacggagcac tccggccgga ggcatgaatg cgcggcgttt
     6961 tttccggacc gtctgatccg tggcgcacgc cgaagcggaa gatggtcgtg ctctggaaca
     7021 cttgccccgg cttcaattcg gtcgtcggga agttcggctc gttggggctg ttcgggaaat
     7081 gctgggtctc aagcgttacg gcatcggtct ggcgatagag gccgccgtag cccgcgaact
     7141 ggccggcaag cgcgttgccg gtataaacct ggatcccggg ctgggtggtc aggcattcca
     7201 gcgtccgccc ggttgcggga tcgtagatcg tcgccgccaa ctgcggcgtg gacgggtcgc
     7261 cgctcttgtt caggacccaa ttgtggtcgt agccgtgcgc ccacagcagt tgctggttat
     7321 cgtcgcggat gcgttcggcg atcttgtgcg gcgagcggaa gtcgaatggc gtaccggcga
     7381 cgggcgcaag ctgccctgtc ggaatccccg tcgcgtcagt cggcgtaaag cggtccgcgt
     7441 cgatcgtcag catctcgttc tcgacgccgt ccggcgcgcc gaccccggca aggctgaagt
     7501 aggaatggtt ggtgaggttc agcaccgtat ccttgtcggt ggtcgcgtga taatcgatcc
     7561 ggaacgcacc cgaatcgtcg agcgtatagg tgaccgtgag gttcagcgtg ccgggaaagc
     7621 ccgcctcgcc gtccgggctg gtcaggcgca acgtggcact gacgctctgc cccgatgtgc
     7681 gcaacggctg cacggtccag atcttcttat cgaacccctg cggtccgcca tgcagcgaat
     7741 tcggcgcgtt gttgatcggc aacgtgtagg cgtgcccatc gagcgtgaag cgcccgttgg
     7801 cgatccgatt ggcgtaacga ccgatcagcg cgccgaagaa tggtccgccc gtgggaagcg
     7861 ccgactcata ctgcgtgagc gtcgggtaac cgagaacgac gtcggcgaga tggccttgcc
     7921 ggtccggcgc gatgatttgt gtgatgcgac cgccataact gatgaaccgg acggtcagcc
     7981 cgtcgcgcgc ggtcatcgtg gtgatcgtca ccgcgttgcc gtcctgcgtg gtgccgaacg
     8041 gttcggttgt cagcttcgcc gccacggcgg gcgcacaggc ggcggcaagc gcgaggcaac
     8101 tcgcggcgat caaggctttc attcgagatt tcccggacgg actgcggttt cacacggatt
     8161 tgcggtttca cctggacttt tcgcgacggt agcggcgtac cgaggcgttc cgcaagccgc
     8221 cgctgaaccg gcagcacgga ggcaatatgg cacaacacat ctcgcggcaa acccgcggct
     8281 tgggcatcac atcttgaatg cgcgcggcct gtccggattg ggccgacggc cggcgcacac
     8341 ggccggccta cggtctcagc cctgccgcgg tttgaccgcg gccgcgagca gacgctcgag
     8401 atcctgaaa
//
LOCUS       DATAVD010001282         2190 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3283374, whole genome shotgun sequence.
ACCESSION   DATAVD010001282 DATAVD010000000
VERSION     DATAVD010001282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2190
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3283374"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..194)
                     /locus_tag="VHX39_24420"
     CDS             complement(<1..194)
                     /locus_tag="VHX39_24420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3994330.1"
                     /translation="MRMTVKLKLGLAFATVIILSGMTAWLGIANLSSLNARLDWVLTH
                     PAQRMVESLRLSAELVEVGRA"
     gene            complement(324..>2190)
                     /locus_tag="VHX39_24425"
     CDS             complement(324..>2190)
                     /locus_tag="VHX39_24425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014626164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3994331.1"
                     /translation="AVTLSTGTGLQLVAEQEKEIAEYLALFEIAFKRANNSVDQQYNS
                     ARFQLIAAASIALLAGVAAAFLIAFSIYRGLRNAISLANAVAIGDLNQQVVVKSNDEI
                     KDMVQALNQMTANLRATALVADAIGGGDFTMEAKRLSDKDTLGISLERMTTNLRATAK
                     VADAIADGDLSTEVKRLSDKDALGIALERMTTNLRATAEVANAIADGDLTREARRRSD
                     KDTLGISLERMTNNLRATAKIADAIAEGDLSAEVKRLSDQDALGVALERMTTNLRATA
                     VVADAIADGDLTVEARRRSDKDALGIALERMLDKLRIVVTDAAGAADNVSSGSQQLSS
                     SASAMSQGATEQASAAEQASAAMEQMASNIKQNSDNASETEKIARQSAADAQKSGEAV
                     SRAVQAMQTIAEKIVIVQEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLAER
                     SQTAATQIGAVSSQTVKAAQEATDMLARLVPDIVKTAQLVTEISAACREQDIGAEQIN
                     QAIQQLDKVTQQNASASEEMSATSEELAAQSEQLQTSIAYFRVEADAAHTGSAPHRHE
                     AAQRRSESPAGAARQAKPAASLKSRPAAVAAKRNGFALNLAPGGADHRDAEFERM"
BASE COUNT          344 a          690 c          668 g          488 t
ORIGIN      
        1 gcccgtccga cctcgacgag ttctgctgac agccgcagcg attcgaccat gcgttgggct
       61 ggatgtgtca gcacccagtc gagccgggcg ttcagcgacg aaagattggc gatacccagc
      121 catgccgtca tccccgacag aatgatgacc gtggcgaacg ccagccccag ctttaatttc
      181 accgtcatac gcatgtcgga ctgtctccgg aaacggcgat tggaacctgg tggtgtggcg
      241 tctctggtat gagccgccgt tggatcccgg ccggcatcgg cggtcgtatt gatctgcagc
      301 gatcgagtgg ctcctgcatg gcactacatc cgctcaaact cggcatctcg atgatcggct
      361 ccaccggggg caaggttgag cgcgaaacca ttgcgttttg cggcgacggc cgcggggcgg
      421 gacttcaagg aagcggccgg ctttgcttgc ctggcggccc ccgccggtga ttcgctgcgc
      481 ctttgagcgg cctcgtggcg gtgcggcgcc gatccggtat gggccgcatc tgcctcgaca
      541 cgaaaatatg caatgctggt ctgcaattgt tccgactgcg ctgccagttc ttcggaggtc
      601 gccgacattt cctccgacgc actggcgttc tgctgcgtca ctttgtcgag ttgttggatc
      661 gcctggttga tctgttcggc cccgatgtcc tgctcgcggc acgcggcact gatttcggta
      721 accagttgcg cggtcttgac aatgtccggc accagccggg ccaacatgtc ggtcgcctct
      781 tgcgccgcct tcacggtttg tgaggacacc gcgccgattt gcgttgccgc ggtctggctg
      841 cgttcggcca gcttgcgaac ttcggaggct accacggcaa agcccttgcc atgttcgccc
      901 gctcgagctg cttccactgc tgcgttcaag gccagcaggt cggtctgccg cgcgatctcc
      961 tgcacgatga cgattttctc ggcgatggtt tgcatcgctt gcacggcgcg gctcacggcc
     1021 tccccgctct tttgcgcatc cgccgccgac tgacgggcaa tcttctcggt ctcagatgcg
     1081 ttgtcggagt tctgtttgat gttggaggcc atttgctcca tggcggctga tgcctgttcc
     1141 gccgccgagg cctgttccgt ggcgccctgc gacatcgctg aagccgacga tgaaagctgc
     1201 tggctgccgg acgacacgtt gtccgctgcg cctgcggcgt cggtcaccac tatccgcagt
     1261 ttgtcgagca tgcgttccaa ggcgatgccc agagcgtcct tatcggatcg gcgcctggcc
     1321 tcgaccgtca gatcgccgtc ggcaatcgcg tcggcgacca cagcggtcgc acgcaggttg
     1381 gtcgtcatac gctccaacgc cacgccgagc gcgtcctggt cggacagtcg tttcacctcc
     1441 gccgacaggt cgccttcggc aatggcatcg gcgattttcg ccgtcgcccg cagattattg
     1501 gtcatgcgct ccagcgagat gccgagtgtg tccttgtccg accgtcgcct ggcctcacgc
     1561 gtcaggtcgc catcggcgat ggcattggcg acctctgcgg tggcgcgaag attggtggtc
     1621 atgcgttcca gcgcgatgcc aagggcgtct ttgtcggaca agcgtttgac ctcggtcgac
     1681 aggtcgccat cggcgattgc atcagcgact tttgccgttg cccgcaggtt cgtcgtcatg
     1741 cgttcaagcg aaatgccaag cgtgtctttg tcggacaacc gcttcgcctc catggtgaaa
     1801 tcgccgccgc cgattgcatc ggcaaccaac gcagtcgcgc gcagattggc ggtcatttga
     1861 ttgagcgcct gcaccatgtc cttgatctcg tcgttacttt tgaccacgac ctgctgattg
     1921 aggtcgccga tggccacggc atttgccagc gagatggcgt tgcgcaatcc gcggtagatg
     1981 ctgaatgcga tcaggaaagc ggccgccacg ccggccagca gcgcgatact ggcggccgca
     2041 ataagctgga aacgtgcact gttatattgc tggtcgacac tgttgttggc gcgcttgaac
     2101 gcaatttcga aaagcgccaa atattcggca atctccttct cctgttctgc cacaagttgc
     2161 agtcccgtgc ccgtcgagag ggtaaccgcc
//
LOCUS       DATAVD010001283         1774 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1612118, whole genome shotgun sequence.
ACCESSION   DATAVD010001283 DATAVD010000000
VERSION     DATAVD010001283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1612118"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /locus_tag="VHX39_24430"
     CDS             <1..511
                     /locus_tag="VHX39_24430"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEX3994332.1"
                     /translation="YKWMLGITGVAVAYWNRARQPDWSPASAGWHSFAPGSRGYDNPP
                     SLRADAMRFTRGNPAHAPVYVLAQALDYLAGYDMADVQAHVQALTTAMLERLRELQVP
                     TLTPADPARHGASVCVASQKAQLMVDGMAEGGVLAWNGQGRVRFSFHGYNSAQDVDRA
                     VDALRAEWQ"
     gene            complement(512..1462)
                     /locus_tag="VHX39_24435"
     CDS             complement(512..1462)
                     /locus_tag="VHX39_24435"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3994333.1"
                     /translation="MKAGFIGLGTMGASMAANLQKGIQKDGHTVIVHDVRKEAAAPHI
                     KNGAVWADSPAALAAECEVIFTSLPGPVEFDAVSFGAHGLLSTVRKDTAYFDLTTNSP
                     TTVRKAAEEYTKKGAFLFDAPVSGGPRGAASGKLAIWCGGNQDVFEKWHPVLATIGDQ
                     ARYIGPIGAGSVAKLVHNCYGYIATAAAAEVFSMGVKAGIEPLAIWEAVRQGAIGRRG
                     AFDSLTDQFLPNKYEPPAFALRLAHKDVSLATALGRELNVPMRLANLALADLSEGLNR
                     GWGNRDSRSIMVLQTERAGIEIKVDPQRLTEALDNKSKNG"
     gene            complement(1563..>1774)
                     /locus_tag="VHX39_24440"
     CDS             complement(1563..>1774)
                     /locus_tag="VHX39_24440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX3994334.1"
                     /translation="KRDRSLIVCATLIATYRPEQLRGHLQRALDNGVTKDEISEMITH
                     LAFYSGWPASMTAANIAKDIFAANP"
BASE COUNT          323 a          535 c          555 g          361 t
ORIGIN      
        1 ttacaaatgg atgctcggta tcaccggggt tgcggttgct tattggaacc gggcgcgaca
       61 gccggactgg tctcctgcct cggctggatg gcactcgttt gctcctggtt cgcgcggtta
      121 cgacaacccg ccttcgttgc gtgcggatgc catgcgtttc acccgaggta acccggcaca
      181 tgcgccggtc tacgtcctgg cgcaggcgct ggattatctg gccggttacg acatggcaga
      241 tgtgcaggca cacgtgcagg cattgaccac tgccatgttg gagcggttgc gcgagttgca
      301 ggtcccgaca ttgacgccgg ccgacccggc gcgtcacggg gccagcgttt gcgtggcgtc
      361 gcaaaaagcc caattgatgg tggatggaat ggcggagggc ggggtgctgg cgtggaacgg
      421 gcaggggcgc gtgcgattta gtttccacgg ttacaattcc gcacaggacg tcgaccgtgc
      481 ggtcgacgcc ctgcgagcgg aatggcaatg atcagccgtt ctttgacttg ttgtccaaag
      541 cctcggtcag ccgttgcgga tcgaccttga tctcgatgcc ggcccgttcg gtttgcagca
      601 ccatgatgga gcgtgaatca cgattgcccc agccgcggtt cagcccctcg gacaagtcgg
      661 ccaatgcgag attggcaagc cgcatcggaa cgttcagttc gcggccaagt gcggtcgcca
      721 gcgaaacgtc cttgtgcgca agacgcaggg caaacgcggg tggttcgtat ttgttcggca
      781 ggaactgatc ggtcagcgaa tcgaatgcgc cgcgccggcc gatggcaccc tgtcgcaccg
      841 cttcccagat cgccagcggc tcgatgccgg ctttgacgcc catgctgaac acttcggccg
      901 cggcagccgt cgcgatgtag ccgtaacaat tatgcaccag cttggcgacc gagccggcgc
      961 cgatcggacc gatatagcgc gcctgatcgc caatcgtcgc cagcaccgga tgccattttt
     1021 caaacacgtc ctgattgccg ccgcaccaga ttgccagttt gccggaggca gcacctcgcg
     1081 gcccgccact gaccggagca tcgaacaaaa aagcgccttt tttggtgtat tcctcggcgg
     1141 ccttgcgcac cgtggtcggc gagtttgtcg tcagatcgaa ataagccgtg tccttgcgga
     1201 ccgtggataa caacccgtgg gcgccgaacg aaacggcgtc gaactccacc ggacccggca
     1261 acgaggtgaa gatcacctcg cattcggctg ccaatgcggc cggactgtcg gcccacacag
     1321 cgccgttctt gatgtgcggt gcagcggcct ctttgcgaac atcgtgcacg atgacggtat
     1381 ggccatcttt ctggatgccc ttttgcaggt tggccgccat gctggcgccc atggtaccaa
     1441 ggccgatgaa acccgccttc atttgttacg ctccttgctt ctggtcaatc gatctcgatc
     1501 tggatcatac gaacgacgcc gatctccccc gacgaggccg ggggaggagc gccgcgctgt
     1561 tcttacggat tggcggcaaa aatatccttg gcgatgttgg cggccgtcat cgatgcaggc
     1621 cagccggaat aaaacgccag atgggtgatc atctcggaga tttcatcctt ggtcacgccg
     1681 ttatccagcg cgcgctgcaa atgaccgcgt agctgctccg gacggtacgt cgcgatcaat
     1741 gtggcgcaaa cgatcaggct gcggtcgcgc ttgg
//
LOCUS       DATAVD010001284         2279 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2914221, whole genome shotgun sequence.
ACCESSION   DATAVD010001284 DATAVD010000000
VERSION     DATAVD010001284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2914221"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2119
                     /locus_tag="VHX39_24445"
     CDS             <1..2119
                     /locus_tag="VHX39_24445"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HEX3994335.1"
                     /translation="ALHASVAPHGPSAGTSTGQQGGGLVRPNPELLADPRAEVAMVGL
                     IEVRRNRALVLGKLGRSQEAEALVASSISLARANGVDQPMLSGRLYRSLAVVASSQGA
                     NTTTAVDLARSSGRFEVALPGSKTLAETELLRAAALQHGGRSGAAVAACHDAVQVLIG
                     LKSGIGEELIAPCLSAYAAASGGHDQALLAEMFLAAQVAQGGVTAQQIAEASARLRAN
                     GRDPKVAGAIRTWQDASDKLSALYGQRDAIAAARQQGAPAPGGLSQAQIDQQIADAQT
                     AVANADSALQSAAPNYGQLVQQVVPAADVIAALHPHEAFVAITLSEHGGWVFLLRSGN
                     AAGAITVAPVPGGTENMAKLVRQVRAGIELTASGLPKFDIEGAQTLYTDTLGGVAQSL
                     DGVTALVVAPDGPLLSLPFGVLLTGPADAASLASAPWLVRKFAVADVPAAANFVSLRK
                     IAGTSRASRPWFGFGNFRPITLAQAERSFPGGTCADSARLLAGLPALPYTVKELDAAR
                     QIMGAGTSDELLGPAFTADAVQRMPLKDYRTLQFSTHALLPAELRCQDQPAIITSAPP
                     GAVDASGAMLTTDRILGLNLDADLVILSACNSGGPGGSTAGESLSGLARAFFYAGARS
                     MLVTHWSVNDQAAAYLVSDTLRRMQTKGGTGVAEAMREAELSLLDAAVKAGGSPAAHP
                     FFWAPFAVIGDGGAAPTPGSPPS"
BASE COUNT          382 a          707 c          774 g          416 t
ORIGIN      
        1 cgccttgcac gcgagcgtcg cgccccacgg gccctccgca ggaacttcca cgggccagca
       61 aggcggcggc ctggtgcggc caaatccgga actgctggca gatccaagag ccgaagtcgc
      121 gatggtcggg ctgatcgagg tgcgccgaaa tcgcgccttg gtattgggaa agcttggccg
      181 ctcacaggag gcagaagccc tggtcgcgtc ttccatcagc ctcgctcggg ccaacggtgt
      241 ggatcagccg atgctcagcg gccggctgta ccgctccctg gccgttgtgg cctccagcca
      301 gggggcgaac acgaccaccg cggtcgatct ggcgcggtcg tcaggacgct tcgaagtggc
      361 gttgcccggc tcgaagactt tggccgaaac cgagttgctg cgagctgccg cattacagca
      421 tggcgggcgg agtggtgccg ctgtcgcagc atgccatgac gcagttcagg tactgatcgg
      481 gttgaaaagc ggcatcggcg aggaactgat agcgccgtgt ctcagtgcct atgccgcggc
      541 atccggtggt catgatcagg cgctgctggc cgagatgttc cttgccgcgc aagtggcaca
      601 aggcggtgtt acagcccaac aaatcgccga ggcgagtgcc cggctgcgcg ccaatggccg
      661 cgacccgaag gtggccggcg caatccgcac ctggcaggac gccagcgaca aattgtcggc
      721 gctgtatggt caacgcgacg cgatagcggc cgcgcggcag cagggtgcac cggcgccggg
      781 cggactttct caggcgcaga tcgaccagca gatcgctgac gctcagacgg ccgtcgccaa
      841 tgccgattcc gcgttgcagt ccgcagcgcc gaactatggt cagctagtac aacaggtcgt
      901 gccggcggct gacgtgattg ccgcattgca cccgcacgag gcctttgttg ccattacgct
      961 cagcgaacat ggcggctggg tatttttgtt gcggtccggt aatgcggcag gagcgatcac
     1021 tgtggcaccg gttccaggcg gcaccgagaa catggcgaag ctggtccgcc aggttcgtgc
     1081 tggcatcgaa ttgaccgcaa gcggcttgcc aaagttcgac atcgagggag cccagacgct
     1141 ttacaccgat acacttggcg gcgtggcgca gtcgctggat ggcgtaacgg cgttggtggt
     1201 cgcgccggac gggccgctgt tgtccttgcc gtttggtgtg ttgttgaccg gtccggcaga
     1261 cgctgcctcg ctggcgtcgg caccttggct ggtgcggaaa ttcgctgtgg ccgacgtgcc
     1321 ggcagcggcc aatttcgtga gccttcgcaa aattgccggc acctcgcgag ccagccgacc
     1381 ctggttcggc ttcggcaact tccgtccgat cacgctggct caggctgaac ggagttttcc
     1441 tggtgggacc tgcgctgaca gcgccaggct gctcgccgga ttgcctgcgt tgccgtacac
     1501 ggtgaaggag ctggacgcgg cacgccagat catgggtgcg ggtacgtccg acgaattgct
     1561 gggaccggca tttaccgccg atgcggtgca gcggatgccg ctgaaggatt atcgcacact
     1621 gcaattctcg acgcatgcct tgctgcccgc cgaactccgt tgccaggatc agccggcgat
     1681 catcacttcg gcgcctcccg gagcggtcga tgcctccggc gcaatgttga cgaccgatcg
     1741 tattcttggc ctcaatctgg atgccgacct tgtcatcctg tcggcgtgca actccggcgg
     1801 tcctggtgga agcacggctg gcgaaagcct gtcgggactc gctcgcgcct tcttttatgc
     1861 gggcgcgcgg tcgatgttgg tgacccattg gtcggtcaat gatcaggcag cggcgtatct
     1921 ggtgtcggac accttgcggc ggatgcagac gaaaggtggt accggcgtgg ccgaggccat
     1981 gcgcgaggca gaactgagtt tgctggacgc tgcggtcaaa gcggggggta gtccggcggc
     2041 gcatccgttc ttctgggcgc cattcgccgt gatcggcgac ggcggagcgg cgccaacccc
     2101 gggttcgccg ccgtcataag gttcattccg tcggttcgac catggacagc ggaggcgcga
     2161 cgtcctccag agagcgccgc tccgtgcgtt cgccaagcca cacagtgagc ccggaagcca
     2221 gcgccataag aacgccggcc agcaaatagc ccgccagcac gcgatctcgc gagccgctt
//
LOCUS       DATAVD010001285         1760 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3660329, whole genome shotgun sequence.
ACCESSION   DATAVD010001285 DATAVD010000000
VERSION     DATAVD010001285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3660329"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..183
                     /locus_tag="VHX39_24450"
     CDS             <1..183
                     /locus_tag="VHX39_24450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994336.1"
                     /translation="RVVLGTTFHVLAPGDCLRYGPPADVTFCNRGLARCRYVIALLRV
                     AEKHGSRQIGNPGVLR"
     gene            331..>1760
                     /locus_tag="VHX39_24455"
     CDS             331..>1760
                     /locus_tag="VHX39_24455"
                     /inference="COORDINATES: protein motif:HMM:NF020036.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX3994337.1"
                     /translation="MSSAAEAVAPTEGAASGARERRNYRIAIHLGMFAAGILVPVLLI
                     VTLMLINTARMLRDDALNDARLIAQHLNETIDVELEKAIAVDETLAPALTLDDGQHAG
                     SDAQAREVARRLGMNIVIQDAVGQQIINTFVPIGSPLPASNESMLALDRLAATQNAVV
                     ISDLRTATIRNIPTVNAVMPVFKGSQVAYFVSATLSPARFGGILRTGLPDGWISGLIG
                     HDGRLIARNIEQDRYIGTSNPAFLAAATKPEGVWTGLSREGIAIAGVYVRSPLSGWIV
                     SVAVPEATLRQPAKLAMLALVGLVIASLAVSTILGWRLSRRIAVPIRNLAWRARELGA
                     GRMQAAAQSSVEEVNAVLDALQAASVELERRAVAASGATEAVRANEERLQLAQDTAGI
                     GTIDWDIQADHAVCSPRFYELFARPAGSRMSFAGFMAGIHPEERTRIEAFYRRLREQG
                     GPFEDEFRILTGDGEERWIYMKGRLDL"
BASE COUNT          306 a          507 c          604 g          343 t
ORIGIN      
        1 agggtggttt tgggaaccac cttccatgtc ctcgcaccgg gcgactgcct gcggtatggt
       61 ccgccggcgg atgtcacgtt ctgcaaccga ggcctcgcgc gctgccgcta tgtgatcgct
      121 ttgctgcggg ttgcggagaa gcacgggtcg cgacagatcg gcaatccggg cgtgcttcgc
      181 tgattggacg gatcctgccg tagctcggct tgtgcgcggg actgttgcac cggcgaaagc
      241 cgatcattga ctcggcgcgc gggattgcat catctcggca gcaaccacgt gatctgcatt
      301 cttacgcgcg ggctggcgtc agggggccgc atgtcgtctg ctgcggaggc agtagcacca
      361 accgagggcg ccgcttccgg ggccagggag cgccggaact atcggattgc catccacttg
      421 ggaatgtttg cggcgggcat tctggttccg gtccttttga tcgtcacgtt gatgttgatc
      481 aataccgcac gaatgttgcg cgacgatgcg ttgaatgatg cccgcctgat cgcccaacac
      541 ctcaacgaga ccattgacgt cgaacttgag aaggcgatcg cggtggacga gacgctggcg
      601 ccggctctga ctttggacga cggccagcac gcgggttccg atgcccaggc gagagaagtg
      661 gcgcggcgac tggggatgaa tatcgtgatc caggatgctg tgggccagca aatcatcaac
      721 acctttgtgc cgatcggcag cccattgccc gccagtaacg aaagcatgct ggcgctcgat
      781 cgccttgcgg cgacgcaaaa cgcggtggtg atttccgacc tgcggacggc gaccattcgc
      841 aacatcccga cggtcaatgc ggtcatgccg gtcttcaaag gctcacaggt cgcatatttc
      901 gtcagtgcca ccctgtcgcc ggcgcgattt ggcggaattc tcaggaccgg tctgccggat
      961 ggatggatct ccggtctgat tggtcacgac ggacgtctca tcgcacggaa tatagagcag
     1021 gatcgttaca tcggaaccag caatccggcg tttctggcgg cagcgacgaa accggaagga
     1081 gtttggaccg gcctgtcgcg cgaaggcatt gcgattgccg gtgtctatgt gcgctcaccg
     1141 ttgtcaggat ggatcgtgtc cgtggcagtg ccggaggcaa ccctgcggca gccggccaaa
     1201 ctggcgatgc tcgcgttggt cggccttgtg atcgcctcgc tcgcggtttc gaccattctc
     1261 ggctggcggc tgtcgcggcg gatcgccgtg ccgatccgca accttgcgtg gcgggcgcgg
     1321 gaactcggtg ccggacgcat gcaagcggcc gcgcagtcca gcgtcgagga ggtcaacgcg
     1381 gtgctggacg cgttgcaggc cgcctcggtt gaactcgagc ggcgggcggt ggcggcaagc
     1441 ggggcaaccg aagccgtgcg tgcgaacgag gaacggctac agttggcgca ggataccgcc
     1501 ggcatcggga cgatcgactg ggatatccaa gccgatcatg cggtatgttc gccgcggttc
     1561 tatgaactgt tcgcgcgccc ggctggcagc cgcatgagtt ttgctggctt catggcgggc
     1621 attcacccgg aggagcggac gcggatcgaa gcattctacc ggcgattgcg cgagcaggga
     1681 gggccgttcg aagacgagtt ccgcatcctg accggcgatg gtgaggagcg ctggatttat
     1741 atgaagggcc ggctcgatct
//
LOCUS       DATAVD010001286         1977 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3471710, whole genome shotgun sequence.
ACCESSION   DATAVD010001286 DATAVD010000000
VERSION     DATAVD010001286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1977
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3471710"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            498..1328
                     /locus_tag="VHX39_24460"
     CDS             498..1328
                     /locus_tag="VHX39_24460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX3994338.1"
                     /translation="MTYRTLMVHLELGHLNGNLLAVAGDLAQRFDAGVIGIAMCQPMQ
                     IIYSEGYVPADVILEDREQRENEVAAAEAEFRNVLQGRVGRLDFRSEVTSDPLADYLA
                     RQARSADLIITGVEHNASVFDHSRHVNIGDVVMHVGRPILVVPTAASGVSFDSVMVGW
                     KDTRETRRAIVDALPFLQKATQIAVVEIVAEPELEAARERLDDVVRWLGCHGVAAEPI
                     ARKSAGEDAHQLLAAAQERGAGVIVAGAYGHSRVREWVLGGVTRDLLLRAGRCALVSH
                     "
     gene            complement(1375..>1977)
                     /locus_tag="VHX39_24465"
     CDS             complement(1375..>1977)
                     /locus_tag="VHX39_24465"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3994339.1"
                     /translation="YRYTPETIADQILTVLDTLSLAKVHWVGESSGGLIGLLLAAAHP
                     ERFASLVLCNTPSRIPDRIKQIYALDCADPGQAMRVHGVGEWCRQTLGYRLDLEHAEP
                     ALQEWVIREMDRTPALVAAAMHECFEHVDTETILPSIKPPVLLLSGDKSQISSAQQQL
                     FADTLPNGRAEIFAGYGHGVNLLQPERCARAALEFWQSIA"
BASE COUNT          312 a          574 c          708 g          383 t
ORIGIN      
        1 ggaatagccc agtacgatgc gcaggcgctc gaagatttcc cagaaccggt cgcgcgccgt
       61 gtcgccatag ttttccgcca ggtgtgagcg catgtcggcc tgcacctggt cgttgtccag
      121 cagcgtgtta tccacgtcga acaggaagat cgtgtcggtt ggttcggcca tgtcgcgcgc
      181 cttttcattt caccggccat ttggccatca gccgtctggc cgctcgcacc ctttcatgct
      241 ttcccggccg tgtcattggg caccggctgt gccgcggccc aggtcgcgcc tcgctcgcgg
      301 ttgccgggtt gcttcctgcc tcgacttccg atgcctcggt tataaagcag ccgcgcagcg
      361 ccgagaatgg tcgaaatggg gggacgctgt ccaaagatct cgcggcggat tgaccagggt
      421 caatgcagcg agggcaatcg aggcccttgg ttccgttcat gtttcgcgga cgatcaacgt
      481 ccgcccggag gcaaactgtg acctacagga ccttgatggt gcatctggag ctcggacatt
      541 tgaacggcaa ccttctggcg gtcgccggcg acctcgccca gcgtttcgat gccggcgtga
      601 ttggcatcgc gatgtgccag ccgatgcaga tcatctacag cgagggctac gtgcccgccg
      661 acgtcatcct ggaggatcgc gagcagcgcg aaaacgaggt tgccgcggcg gaggcggaat
      721 tccgcaatgt gctgcaagga cgtgttggcc gtctcgactt tcggtccgag gtgacgtccg
      781 atccgctggc tgattacctg gcgcggcaag ctcgcagcgc ggacctgatc atcaccggcg
      841 tggagcacaa tgcgtcggtg ttcgatcact cgcgccacgt caacatcggc gatgtggtga
      901 tgcacgtggg acggccgatc ctcgtggtgc cgacggcggc ctccggcgtc agtttcgata
      961 gcgtgatggt tggctggaag gacaccagag agacgcgccg ggcgatcgtc gacgcgttgc
     1021 cgttcctgca aaaggccacc cagatcgcgg tggtggaaat tgtggccgag ccggagctgg
     1081 aagcggcacg ggaaaggctc gacgatgtcg tgcggtggct tggctgtcat ggtgtggcgg
     1141 cggagccgat cgctcgcaag tcggcggggg aggatgcgca tcaactgctc gcggccgccc
     1201 aggaacgggg ggccggcgtg attgtggcgg gcgcttatgg gcacagccgg gtgcgcgaat
     1261 gggtgctcgg gggcgtgacc cgcgatttgc tgctgcgggc gggccgttgc gcgctcgtct
     1321 cgcattgagg tccggcgccg gtgctggtga gttgagagtc gtggcctctg gcggtcaggc
     1381 tatcgactgc cagaactcca gagcggcgcg agcgcaacgt tccggttgca gcagattcac
     1441 gccgtggccg taaccggcga atatctcggc gcgtccgttg ggtagcgtgt cggcgaacag
     1501 ctgttgttgc gctgacgaaa tctggctttt gtccccgctg agcagcagca cgggtggttt
     1561 gatcgacggc agaatggtct cggtatcgac gtgttcgaaa cattcgtgca tggcggcggc
     1621 gaccagggcc ggggtgcggt ccatttcgcg gatgacccat tcctgcaggg cgggttccgc
     1681 gtgctccagg tccagccggt agccgagggt ttgccggcac cactcgccga cgccgtggac
     1741 gcgcatggcc tggccggggt cggcgcagtc cagcgcatag atctgcttga tgcggtcggg
     1801 gatgcgggac ggcgtgttgc acagcacgag gctggcaaac cgctccggat gggcggcggc
     1861 gagcagcagt ccgatcaggc cgccggagga ctcgccgacc cagtggactt tggccaggga
     1921 cagagtgtcg aggacggtca ggatctgatc tgcgatggtt tccggcgtgt agcggta
//
LOCUS       DATAVD010001287         5305 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3660385, whole genome shotgun sequence.
ACCESSION   DATAVD010001287 DATAVD010000000
VERSION     DATAVD010001287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5305
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3660385"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1168
                     /gene="sucA"
                     /locus_tag="VHX39_24470"
     CDS             <1..1168
                     /gene="sucA"
                     /locus_tag="VHX39_24470"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008495135.1"
                     /note="SucA; E1 component of the oxoglutarate
                     dehydrogenase complex which catalyzes the formation of
                     succinyl-CoA from 2-oxoglutarate; SucA catalyzes the
                     reaction of 2-oxoglutarate with dihydrolipoamide
                     succinyltransferase-lipoate to form dihydrolipoamide
                     succinyltransferase-succinyldihydrolipoate and carbon
                     dioxide; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEX3994340.1"
                     /translation="EPVLKQIGGSLAKVPAGFDVNPKIARQLEAKQAMFDTGEGIDWA
                     TGEALAFGSLLLEGSRVRLSGEDCQRGTFSQRHAVLIDQTNQHEYVPLNNIRPDQAKI
                     EIYNSLLSEAGVLGCEYGYSLADPRTLVLWEGQFGDFANGAQMIIDQFIASGETKWLR
                     MSGLVMLLPHGYEGQGPEHSSARIERYLQLCAERNMWVCNLTTPANYFHALRRQLHRN
                     FRKPLIVFTPKSLLRHKLAVSPVSDMAEGSRFQFVIPEIDDIAPAEQVRRVIICSGKV
                     YYDLLQERRAKEIKDIAIVRLEQIHPFPENTLGRVLKPYISADVVWCQEEPENMGSWN
                     FVDRRIERVLHRLEMKSYRPVYVGREAAASPATGLARTHMAQQARLVTTALGLG"
     gene            1180..2514
                     /gene="odhB"
                     /locus_tag="VHX39_24475"
     CDS             1180..2514
                     /gene="odhB"
                     /locus_tag="VHX39_24475"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HEX3994341.1"
                     /translation="MPTEIKVPTLGESVTTATIARWMKHPGDTVAADEPLVELETDKV
                     TVEVSAPATGVLTAINFPEGSEVEVGALLGMLDGDSAAAPPPARPPAPASAAPAPAGR
                     AAANPSPGINPPPRPLGPVTRPAAASTQAAPAAAMTLTAPPAIEMPPPVHDPLPAAAR
                     MMEQQKLAPSEIGPGSGKDGRITKGDVLAFLNRPAPAAAVPSAPVAARAADPREQRVR
                     MTRLRRTIAARLKEAQNTAAMLTTFNEVDMSAVMALRAEYRDVFEKKHNGVRLGFMSV
                     FVRACCVALKEFPAVNAEIDGDDIVYKNYVNMGIAVGGPAGLVVPVIRDAETLGLAGI
                     EAAIADFGRRARDGHLKLDDLTGGTFSITNGGVYGSLMSTPILNPPQSAILGMHKIQD
                     RPIAIGGKVEIRPMMYLAVSYDHRIVDGKEAVSFLVRVKEGVEDPRRLLLEI"
     gene            2517..2885
                     /locus_tag="VHX39_24480"
     CDS             2517..2885
                     /locus_tag="VHX39_24480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3994342.1"
                     /translation="MFDHIGLAVRDLAKTRAFYTASLAPLGLRLQYDQDDVAAFGPPG
                     KWALWFYGKGDGPTGVHIALKAESRAQVDAFYAAAIAAGGKDNGAPGLRPHYTPTYYG
                     AFVFDPDGHNLEAVCYATEA"
     gene            2886..4277
                     /gene="lpdA"
                     /locus_tag="VHX39_24485"
     CDS             2886..4277
                     /gene="lpdA"
                     /locus_tag="VHX39_24485"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEX3994343.1"
                     /translation="MADAFDLIVIGSGPGGYVCAIRAAQLGLKVACVEKRATLGGTCL
                     NIGCIPSKALLHSSEDFAAAGHQFAAHGIVIEGIKLDLAKMQARKDSVVTANVKGVEF
                     LFRKNKITWLKGNGRIIASDAVDVDGTVYQTKRIVIATGSESTPLRGVTVDEKRIVTS
                     TGALELGKVPNHLVVIGAGIIGLELGSVWRRLGAKVTVVEFLDRILPGTDAEIAAATQ
                     RILTKQGLTFRLSSKVTSATANDNGVTLTIEPVAGGAAEQITADIALLAIGRRPYVEG
                     LGLDAVGVVLDERGRVRTDGHYASNIPGIYAIGDAIAGPMLAHKAEDEGVAVAEILAG
                     RAGHVNYGVIPAVVYTWPEVAWVGQTEEELKAAGIAYNVGKFPFTANGRARAMGDTDG
                     FVKLLADKTTDRLLGAHILGPDAGTLIAELAIAMEFGASAEDVARTCHAHPSLNEAVK
                     EAALAVDGRALHI"
     gene            4281..5276
                     /gene="pdxA"
                     /locus_tag="VHX39_24490"
     CDS             4281..5276
                     /gene="pdxA"
                     /locus_tag="VHX39_24490"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0042823 - pyridoxal phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEX3994344.1"
                     /translation="MLPIALTMGDPAGIGGEITLRAWLTHPGMNFVALDDPERLAGVA
                     KALGLDVPIRVVEHASDAATVYQHSLPVLPVRLAEPANPGHPNPANAASVVTSIERAT
                     ALCLAGEACAVVTNPINKAALYQAGFHYPGHTEFLAALTGAVGQQIMMLVSPHLRVVP
                     VTVHASLRASIAMLTTRMIVDAARTTATALQRDFGLVQPRLAIAGLNPHAGEQGALGN
                     EETTLIQPAIDALRAEGIDVAGPWPPDTMFTPTARQRYDVAICMYHDQALIPLKTLDM
                     DHGVNVTLGLPIVRTSPDHGTAYDIAGKGVADPSSLLAALTLAAELASRRARKVT"
BASE COUNT         1014 a         1644 c         1673 g          974 t
ORIGIN      
        1 cgaaccggtc ctgaaacaaa ttggcggctc attggcaaaa gtgcccgccg gcttcgacgt
       61 caacccgaag atcgcgcgtc agctcgaagc caaacaggcc atgttcgata ccggtgaggg
      121 catcgattgg gccaccggcg aggcgctggc gtttggttcg ttgctgttag agggcagccg
      181 cgtccggctg tcgggcgaag attgccagcg tggcaccttc agtcagcgtc atgcggtgct
      241 gatcgatcag accaatcagc acgaatatgt gccgctgaac aatatccgtc ccgatcaggc
      301 gaaaatcgaa atctacaatt cgttgctgtc ggaagccggg gtgcttggct gcgaatatgg
      361 ctattcgctg gccgaccctc gcacgctggt gttgtgggaa ggacagttcg gcgatttcgc
      421 caacggcgcg caaatgatca tcgatcagtt catcgccagc ggcgagacca agtggttgcg
      481 gatgtcggga cttgtgatgc tgctgccgca tggctacgaa gggcaggggc ccgagcactc
      541 ctcggcgcgg atcgagcgct atctgcaact gtgcgccgag cggaacatgt gggtctgcaa
      601 tctgaccacg ccggcgaatt acttccacgc gctgcggcgg cagttgcacc gcaatttccg
      661 caagccgcta attgtattca cgccgaaatc gctgctccgt cacaagttgg cggtctcgcc
      721 ggtgagcgac atggcggaag gcagccgctt tcagttcgtc attccggaga tcgacgatat
      781 tgcaccggcc gagcaggtgc gccgtgtcat catctgctcc ggcaaggtgt attacgattt
      841 gctgcaggaa cggcgcgcca aggaaatcaa ggacattgcc atcgtaaggc tggagcaaat
      901 ccatccgttt ccggagaata ctctggggcg ggtactcaaa ccctatatca gcgccgacgt
      961 tgtgtggtgc caggaagagc cggagaacat ggggtcctgg aatttcgtcg accggcggat
     1021 cgaacgggtt ctgcatcggc tcgaaatgaa atcctaccgt ccggtttatg tcggacgcga
     1081 ggcggcggcg tctccggcga caggtctggc ccgcacgcac atggcccagc aggcgagatt
     1141 ggtgacgacg gctctgggtc tgggataagg ggaggaccga tgccaacgga aatcaaagtc
     1201 ccgactttgg gcgagagcgt cacgaccgcc acgatcgcac gctggatgaa gcatccaggc
     1261 gacaccgtgg ctgccgacga accgctggtc gaactggaaa ccgacaaagt aacggtcgaa
     1321 gtgtccgctc ccgccaccgg cgtgttgacc gcaatcaact tccccgaagg cagcgaggtc
     1381 gaggttggcg cactgctcgg catgttggat ggcgattcag ccgcggcgcc cccgccagcg
     1441 cgcccaccgg ctccggcttc cgctgcgccg gccccggcag gcagggcggc cgcgaacccg
     1501 tccccgggga tcaatccgcc gccgcggccg ttgggcccgg taaccagacc ggctgcggca
     1561 tcgacccagg ctgcgccggc cgcagcgatg acgctgaccg cgccacccgc aatcgagatg
     1621 ccgcctccgg tccatgatcc acttccggct gccgcccgaa tgatggagca acagaagctc
     1681 gcgccctccg agatcggccc gggatcggga aaggatgggc ggattaccaa aggggatgtg
     1741 ctggcgttcc tgaaccggcc cgctccggcg gctgccgttc cctctgcacc ggtggcagcg
     1801 agggcggccg acccgcgtga acagcgcgtc aggatgaccc ggctgcgccg gaccatcgcc
     1861 gcacgtctga aggaagcgca gaacaccgcc gcgatgctga ccaccttcaa cgaggtggac
     1921 atgtcggcgg tgatggctct gcgtgcagaa tatcgcgatg tcttcgagaa gaagcacaac
     1981 ggcgtccgcc tcggcttcat gagtgtcttc gtgcgcgcct gctgtgtggc gctgaaggaa
     2041 ttccccgccg tcaatgccga gatcgacggc gacgacatcg tttacaagaa ctacgtcaac
     2101 atgggcattg cggtgggcgg tcccgcgggc ctcgtcgtcc cggtgatccg cgacgccgaa
     2161 actcttggcc tggccggaat tgaggccgcg attgcggatt ttggccgacg cgcgcgggat
     2221 gggcatctga agctggacga cctgaccggc ggcacgttca gcatcaccaa cggcggcgtc
     2281 tatggctcgc tgatgtcgac gccgatcctc aacccgccgc aatcggccat tctgggcatg
     2341 cacaaaatcc aggaccggcc gattgcgatc ggcggcaaag ttgaaatccg tccaatgatg
     2401 tatctcgccg tgtcgtacga tcaccgcatc gtcgacggca aggaagccgt ttcgttcctg
     2461 gtccgggtca aggagggcgt tgaggatcca cgccggctgc tgctggagat ctgatcatgt
     2521 tcgaccatat cggcctagcg gttcgcgacc tggccaaaac gcgtgcgttc tacacagcct
     2581 cattggcgcc gcttggcctt cgcctgcagt atgatcagga tgatgttgcg gcctttggcc
     2641 cgccgggaaa atgggccctg tggttttacg gaaaaggcga tggaccgacc ggcgtccata
     2701 tcgcgctgaa agccgaaagc cgagcgcagg tcgacgcttt ttacgccgcc gcgatcgccg
     2761 ccggaggcaa ggacaatggg gcaccaggcc tgcggccgca ttatacgccg acctactatg
     2821 gcgcctttgt tttcgatccc gacggccaca atctcgaggc cgtctgttac gcgacagagg
     2881 cgtaaatggc tgacgcattc gacctcatcg taatcggctc gggtcccggc ggttatgttt
     2941 gcgcaatccg tgccgcacaa ctcggcctga aagtcgcttg tgtcgaaaag cgtgccacac
     3001 ttggcggcac ctgcctcaat ataggctgca tcccctcgaa agcgttgctg cattcgtcgg
     3061 aggattttgc cgccgcggga catcagttcg cagcccacgg catcgtgatc gaagggataa
     3121 agctcgacct tgcgaagatg caggcgcgta aggattccgt cgtcactgcc aacgtgaagg
     3181 gcgtggaatt cctgttccgc aagaacaaga ttacctggct caaaggcaac ggtaggatca
     3241 tcgcgtccga cgcggtcgac gtcgacggaa cggtttatca aacaaaacgc attgtcattg
     3301 ccaccggcag tgaatcgact ccgctgcggg gcgtcaccgt cgacgagaaa cggatagtta
     3361 cgtcgaccgg tgcattggaa ctcggcaagg tgccgaacca cctcgtggtg attggcgccg
     3421 gcatcatcgg attggagctt ggcagtgtct ggcggcggct tggcgcaaaa gtcacggtgg
     3481 tcgagttcct ggatcggatt cttcccggta cggacgccga aattgccgcc gccacgcaac
     3541 gcattctgac caaacagggg ctgacgttcc ggctgagcag caaagtcacc agtgcaacgg
     3601 ccaacgacaa cggtgtcacg ttgaccatcg aaccggtcgc cggcggtgca gccgaacaaa
     3661 tcaccgccga catcgccttg cttgccattg gacgccgtcc gtacgtcgaa ggtctgggtt
     3721 tggatgccgt cggtgtggtg ctggatgaac gaggccgcgt gcgcaccgat ggtcattacg
     3781 cctccaacat tcccggcatt tacgccatag gcgatgccat tgccggtccg atgctcgccc
     3841 acaaggcgga agacgaaggt gtcgccgtag ccgaaatcct tgccggccgc gcggggcatg
     3901 tgaactacgg cgtgatcccg gccgtagttt acacgtggcc ggaggtcgcc tgggtcggcc
     3961 agaccgagga agagcttaaa gccgccggca tcgcctacaa cgtcggtaaa ttcccgttca
     4021 ccgcgaatgg ccgtgcccgc gccatgggcg acacggacgg ttttgtgaag ttgctggccg
     4081 acaagacaac cgaccgcctg ctcggcgccc atatccttgg gcccgatgcc ggcacgctga
     4141 tcgccgaact cgccattgcg atggaattcg gcgcttctgc cgaggacgtg gcccgcacct
     4201 gccacgccca ccccagcctg aatgaggcgg tgaaggaggc cgctctggca gttgacgggc
     4261 gggcgttgca tatctgaggc atgcttccca ttgctctcac catgggcgac cccgccggga
     4321 ttggcgggga aatcaccctc cgcgcctggt tgacccaccc gggtatgaac ttcgtggcac
     4381 tggacgaccc tgaacggctc gccggtgtgg cgaaagcgtt gggtctggat gtgccgatac
     4441 gggtcgtcga gcacgcctcc gatgccgcta cggtctacca gcattcattg cccgtcctgc
     4501 cggtccgcct ggccgagccc gcaaacccgg gccatcccaa ccccgccaac gcggcttccg
     4561 tagtgacgtc gatcgaacgc gccaccgcgc tctgccttgc tggtgaggcc tgcgctgtgg
     4621 tgaccaatcc gatcaacaag gcggctttat atcaggcggg gtttcactac cccggtcata
     4681 ccgagttcct tgccgcactg accggcgccg tcggccagca aatcatgatg cttgtcagtc
     4741 cccatctgag ggtcgttccg gtgacggtgc acgcttcgtt gcgcgcctcg atcgccatgc
     4801 tgacaacgcg gatgatcgtt gatgcggcgc gcacgaccgc gacggctctg caacgggatt
     4861 tcggtctcgt gcagcccagg ttggcgatcg ctgggctgaa cccgcatgcc ggcgagcaag
     4921 gcgcgcttgg caatgaggaa actaccctca tccagccggc gatcgatgca ttgcgcgccg
     4981 aagggatcga cgtggccggc ccctggccgc ccgacacgat gttcacgccg acggcacgcc
     5041 agcgctacga cgtggcaatc tgcatgtatc acgaccaggc gctgatccct ttgaagacgt
     5101 tggatatgga tcatggcgtc aacgtaacgt tgggcctgcc gatcgtacgc acgtcgcccg
     5161 accacggaac ggcttatgac atcgccggca aaggcgtcgc cgatccgtcg agcctcctcg
     5221 ctgcgctcac tttggcagcc gagcttgcga gccgtcgcgc ccggaaggtg acatgattta
     5281 cgatgataag gacgcgatcc gggaa
//
LOCUS       DATAVD010001288         1760 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2169226, whole genome shotgun sequence.
ACCESSION   DATAVD010001288 DATAVD010000000
VERSION     DATAVD010001288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2169226"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1001)
                     /locus_tag="VHX39_24495"
     CDS             complement(<1..1001)
                     /locus_tag="VHX39_24495"
                     /EC_number="5.1.99.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate epimerase"
                     /protein_id="HEX3994345.1"
                     /translation="MEILSAAQMSAIDRDSNERGVPVRVLMENAGEAVARFCRDRYLG
                     LAVVVLCGKGNNGGDGAVAARLLAEIQTPVRLVLLGSMEETHGDAASALERAKATQGV
                     EFVEAKDETALREALKDTKLIVDAVVGTGFKPPLRGLAAVARDLVAAMRLPVVAVDLP
                     SGWDADSTKQTSADESGKAQAFRADAVVTFVAPKMAHVFGHLTPGNTFGPVVVAEIGT
                     PLESMPAHTELHWTGTAKRITERARDVNGNKGKFGHVLIVGGSLGKAGAPSMASVAAM
                     RAGAGLTTAAVPRSILATVASVTPELMCVPLEEGSGIGDQGSEGLELAQLEGEPLAKL
                     "
     gene            complement(1187..>1760)
                     /locus_tag="VHX39_24500"
     CDS             complement(1187..>1760)
                     /locus_tag="VHX39_24500"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEX3994346.1"
                     /translation="NIPGEQLGIYPDQELPAKLGGVGRMCSFGESVSMTPLQLGAMVA
                     AIANGGTLYYLQHPTTPEEVAAFEPKVKRQLDIQDVIPEILPGMRGAVDFSNGTARSL
                     HENFEQFPVFGKTGTCSNNGTRFGWFVSYGQAPSGPIVTVVFLEGGRPTFGPKAAELT
                     GEFYRAMYERNYFVPKPEQTQSAMTTATGN"
BASE COUNT          356 a          680 c          403 g          321 t
ORIGIN      
        1 agctttgcca gcggctcgcc ctcaagctgc gctaactcca acccctctga tccttgatcc
       61 ccaatccctg atccctcttc cagcggcaca cacatcaact ccggcgtcac actcgccacc
      121 gtcgccagaa tcgaccgggg aactgcagcc gtcgtcagcc ctgcgcccgc gcgcatcgcc
      181 gccacactcg ccatcgacgg cgcacccgcc ttgcccagac ttccgccgac gatcagcaca
      241 tgcccaaact tgcccttgtt gccattcaca tcgcgcgctc gttcagtaat gcgcttcgca
      301 gtccccgtcc aatgcagttc cgtgtgcgcc ggcatcgact ccagcggcgt gccgatctcc
      361 gccaccacca ccggcccaaa cgtgttcccc ggcgtcagat gcccaaacac atgcgccatc
      421 ttcggagcga caaacgtcac cactgcatcc gcgcgaaacg cctgcgcctt cccactctca
      481 tccgctgacg tctgcttcgt cgaatccgca tcccacccgc tgggcagatc caccgcaacc
      541 accggcaagc gcattgcagc gaccagatcg cgcgccaccg cagccaatcc acgtagcggc
      601 ggcttgaacc ccgttccaac cacggcgtcc acaatcagct tcgtatcttt cagcgcctca
      661 cgcagcgccg tctcatcctt cgcctcgacg aactcaacgc cctgcgttgc cttcgcacgc
      721 tccaatgcag acgcagcatc gccgtgcgtc tcttccatcg agccaagcag caccagcctc
      781 accggagtct gaatctcggc caacaaccgc gcagccacag ctccatcacc accgttgttg
      841 cccttgccgc acagcaccac gaccgccaac cccagataac gatcgcggca gaaccgcgcc
      901 actgcctcgc ccgcattctc catcagcacg cgcaccggta cgccgcgctc attcgaatca
      961 cggtcaatcg cactcatctg cgctgcgctc agaatctcca ttccgtcatt gtccctcaga
     1021 agcggacaac accgaaaatc aaagagatcg aatgctactg ggaggtttgc tctgtttcgt
     1081 taagggcacg gctttagccg tgccgcaaac gctcgaaaag aagaagggct ttagcccctg
     1141 aggtacgctc tctcaagatc gaatcgacta tgtttgaacg tctggactag tttcccgtcg
     1201 ctgtcgtcat cgccgactgc gtctgttccg gcttcggcac aaagtagttc cgctcataca
     1261 tcgcgcgata gaactcgccg gtcagctcgg cagccttcgg cccaaacgtc ggacgcccgc
     1321 cctccagaaa caccaccgtc acaatcggtc cgctcggcgc ctgtccatac gacacaaacc
     1381 acccaaaccg cgtcccgttg ttcgagcacg ttcccgtctt cccaaacacc gggaactgct
     1441 caaagttctc atgcagcgac cgcgccgtgc cgttggaaaa atccaccgca ccgcgcatac
     1501 ccggcagaat ctccggaatc acgtcctgaa tgtcgagctg gcgcttcacc ttcggctcaa
     1561 aggccgcaac ttcttccggc gtcgtcgggt gctgcaggta gtacagcgtc ccgccattcg
     1621 caatcgcggc caccatcgcg cccagttgca acggcgtcat cgacacgctc tcaccgaacg
     1681 agcacatgcg acccacgccg cccagctttg ccggcaattc ctggtcggga taaatcccca
     1741 actgctcacc cggaatgttg
//
LOCUS       DATAVD010001289         2924 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1422612, whole genome shotgun sequence.
ACCESSION   DATAVD010001289 DATAVD010000000
VERSION     DATAVD010001289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2924
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1422612"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..247)
                     /locus_tag="VHX39_24505"
     CDS             complement(<1..247)
                     /locus_tag="VHX39_24505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HEX3994347.1"
                     /translation="MTFLAKPKLHHPELHKNSLGYTRRDYEGAISTLCAGCGHDSISA
                     AIVRACFELELPPHRIAKLSGIGCSSKTPTYFLGASHG"
     gene            complement(244..2094)
                     /locus_tag="VHX39_24510"
     CDS             complement(244..2094)
                     /locus_tag="VHX39_24510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HEX3994348.1"
                     /translation="MLQQVDRVATGADGLQRVNDFVVKFANVNGSGSASANALFAKAV
                     LRMGIAATPRNIFPSNIQGLPTWYEVRISDAGHLAARGGGPDLMVAMNPQTWDQDVKS
                     IEPGGYLFYDNTKPMPPEKFRSDIVVIGVPLTEITNKAYSDSRQRQLFKNIVGLGALS
                     ALIEMDPVVIEQLLGEQFKGRDKLIAANVQALNMGRDWVKQNLDWPIGLTLKHANTVG
                     DRIFIDGNSAAALGAVYGGATVCAWYPITPSSSLAEAFIRYCGQMRTDKATGKKNFAI
                     VQAEDELASIGMVIGAAWNGARAFTATSGPGISLMQEFIGLAYFAEIPAVIFDVQRAG
                     PSTGMPTRTQQTDITACAYASHGDTKHVLLMPEDPYECFEFGALAFDLADRLQTPIFV
                     MLDLEIGMNDRLTKPFEWDDSRRLDRGKVMSAEDLESGKLFGRYLDVDGDGIAYRTLP
                     GTHPTKGAFFTRGTSKDRMARYSEEGHDYQENMERLLKKHHTARTLVPPAIERKADTP
                     TKLGAIYYGSTSPAIAEADALLADQGIHLDLLRVRGFPFGEEVATFIEAHDHVFVVEQ
                     NRDGQLRSLLINELEINPKTLGKVVHYDGTPISARFIAGAIAATIEKAAS"
     gene            complement(2079..>2924)
                     /locus_tag="VHX39_24515"
     CDS             complement(2079..>2924)
                     /locus_tag="VHX39_24515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX3994349.1"
                     /translation="EKVQAEYDARGRRRLVPTGEPDHFFECDDVLVAVGQENAFPWIE
                     RDIGLDFNEWDMPVVNETTFQSTEPRVFLGGDAAFGPKNIIWAVAHGHQAAISIHQFC
                     QGTDVNDRPPPMVTLVSQKMGIHEWSYDNPVSPDLRFKVPHRNKAIALKDIKAEVELG
                     FDDKLAFAEAQRCLNCDVQTIFTDNLCIECDACVDICPVDCITFTEDGEEAELRTRLM
                     APAHNLEQALYVSGHLKTGRIMAKDEDVCLHCGLCAERCPTGAWDMDRFLIDVAQAEN
                     ACCSK"
BASE COUNT          478 a          871 c         1005 g          570 t
ORIGIN      
        1 agccgtgcga ggcgccgagg aagtacgtgg gcgtcttgga ggaacacccg atcccggaca
       61 gcttggcaat ccggtgcggc ggcagttcca gctcgaagca cgcccgcacg atggcggcgc
      121 tgatcgagtc gtggccgcag ccggcgcaca gggtggagat ggcgccttcg tagtcccggc
      181 gcgtgtagcc caggctgttc ttgtgcagct ccggatggtg cagcttcggc ttggcgagaa
      241 aggtcatgat gcggcctttt cgatagtggc agcgatggcg ccggcgatga aacgggcgct
      301 gatcggggtg ccgtcgtagt gcaccacttt gcccagggtc ttcgggttga tttccagttc
      361 gttgatcagc agcgagcgca actggccgtc gcggttctgc tcgacgacga agacatggtc
      421 atgcgcctcg atgaaggtgg cgacttcttc gccgaacggg aagcctcgga cgcgcagcag
      481 gtcgaggtga atgccctggt ccgccagcag tgcgtcggcc tcggcgatcg cgggactggt
      541 ggagccatag tagatcgcgc cgagtttggt gggggtgtcg gctttgcgtt cgatcgccgg
      601 cgggaccagg gtacgggcgg tgtggtgctt cttcagcagc cgctccatgt tttcctggta
      661 gtcgtggccc tcttccgagt agcgcgccat gcgatctttc gacgtgccgc gggtgaagaa
      721 cgcgcccttg gtggggtggg tgccgggcag cgtgcgatag gcgatgccgt caccgtccac
      781 atccagatag cggccgaaca gtttgccgga ttccaggtcc tcggcggaca tcaccttgcc
      841 gcggtcgagg cggcgggagt cgtcccactc gaacggcttc gtcagccggt cattcatgcc
      901 gatttccaga tccagcatga cgaagatcgg ggtttgcagc cgatccgcca gatcgaaggc
      961 cagggcgccg aattcaaagc actcgtacgg gtcttccggc atcagcagca catgcttggt
     1021 gtcgccgtgc gaggcgtagg cacaggcggt gatgtcggtc tgttgggtgc gggtcggcat
     1081 gccagtggac gggccggcgc gttgcacgtc gaagatcacg gcggggattt cggcgaaata
     1141 ggccagaccg atgaactcct gcatcagcga gatgccggga ccggacgttg ccgtgaacgc
     1201 tcgggcgccg ttccaggcgg caccgatgac catgccgatg gaggcaagct cgtcttcggc
     1261 ctggacaatg gcgaaattct tcttgcccgt cgccttgtcg gtccgcatct ggccgcagta
     1321 gcggatgaac gcctcggcga gcgaggagga cggggtgatc ggataccagg cacagacggt
     1381 ggcgccgccg tagacggccc caagggcggc ggcgctgttg ccatcgatga agatgcggtc
     1441 gccgacggtg ttggcgtgct tcagggtcag gccgatgggc cagtcgaggt tctgcttcac
     1501 ccagtcgcgg cccatgttca gggcctggac gttggcggcg atcagcttgt cgcggccctt
     1561 gaactgctcg cccagaagct gctcgatgac cacggggtcc atctcgatca gcgctgacag
     1621 ggcgcccagg ccgacgatgt tcttgaacaa ctggcgttgc cgggaatcgc tgtaggcctt
     1681 gttggtgatc tcggtcagcg gcacgccaat gacgacgatg tcggagcgga atttctccgg
     1741 cggcatcggc ttagtgttgt cgtagaacag gtagccgccg ggttcgatgg acttgacgtc
     1801 ctggtcccag gtctgcgggt tcatcgccac catcaggtcg ggaccgccgc cgcgggccgc
     1861 caggtggccg gcgtcggaaa tccgcacctc ataccaggtg ggcaggccct ggatgttgga
     1921 gggaaagatg ttgcggggcg tcgccgcgat gcccatgcgc aagacggcct tggcgaacag
     1981 cgcattggcg ctggccgacc ccgatccgtt gacattggcg aatttgacga cgaagtcgtt
     2041 gacgcgctgg aggccatcag cccccgtggc aacgcggtct acttgctgca gcatgcgttc
     2101 tccgcttgag ccacatcgat caggaaacgg tccatatccc acgcgccggt cgggcagcgt
     2161 tccgcgcaca gcccgcaatg caggcagacg tcttcgtcct tcgccatgat gcgaccggtc
     2221 ttcaggtggc cggacacata cagcgcctgt tcaaggttat gcgccggtgc catcagcctt
     2281 gtgcgcagtt cggcttcctc gccgtcctcg gtgaatgtga tgcagtcgac cgggcagata
     2341 tcgacgcagg cgtcgcactc gatgcacaga ttgtcggtga agatggtctg cacatcgcag
     2401 ttcaggcagc gctgcgcctc ggcgaaggcg agcttgtcgt cgaagccgag ttccacctcc
     2461 gccttgatgt ccttcagcgc gatggccttg ttccgatgcg gcaccttgaa gcgcaggtct
     2521 ggtgaaacgg ggttgtcgta gctccactcg tggatgccca tcttctggct gaccagggtc
     2581 accatcggcg gcggccggtc attcacgtct gtgccctggc agaactgatg gatggagatc
     2641 gccgcctgat gcccgtgcgc caccgcccag atgatgttct tcggcccgaa cgccgcgtca
     2701 ccaccgagga acacgcgcgg ttccgtggac tggaaggtgg tttcattcac caccggcatg
     2761 tcccattcgt tgaaatcgag gccaatgtcg cgctcgatcc acgggaaggc gttttcctgg
     2821 ccgacggcga cgaggacgtc gtcgcattcg aagaagtggt cgggttcgcc ggtggggacc
     2881 agccggcggc ggcccctggc gtcgtattcg gcctgcacct tctc
//
LOCUS       DATAVD010001290         1616 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_126425, whole genome shotgun sequence.
ACCESSION   DATAVD010001290 DATAVD010000000
VERSION     DATAVD010001290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126425"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            182..1549
                     /locus_tag="VHX39_24520"
     CDS             182..1549
                     /locus_tag="VHX39_24520"
                     /inference="COORDINATES: protein motif:HMM:NF033517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HEX3994350.1"
                     /translation="MPELPDLNHLSHAEKDALIRALWTQVQRLTARVAALEARLGEPS
                     KTPDNSSLPPSKGQKPNKPEKTKRVGPRPGSLGRKGGGRPLACDPDETVTAKPVACAQ
                     CQAVLTDTDHVLHGRYDKIDLPVVRPLVTRVERYAGHCACCGGVTLAAIPAGLEDGSP
                     FSVHIMALALYLRFTHAISYRRLSQLFLHLYALQISEGALDAMLQRAKPCFDSEVMAI
                     LARLRRSRIVGCDETSVRIDGRTHWNWVFQNDQVVIHVVRNSRAASVVTETMAGHRPS
                     IWVSDLYGAQQGHADLWQVCLAHQLRDCKYAIEAGDTIFAPQMKALLLRAVVLARRRK
                     SLAESTRRSHLRRLDHALNAIMVLAPTNSHGRRLRKRYGKVRSHLFTFLEHPDAPPDN
                     NASERELRPTATYRKVTGGFRSKWGADLFAGVRSVVGTAARRGQNAYQAIWAVLDGES
                     VIQTG"
BASE COUNT          318 a          501 c          505 g          292 t
ORIGIN      
        1 atgtcaacca gcccagggca atccgatgaa tgactacgtg tcggtagcac acgatatgtc
       61 cgggatgtat ctgctcaacc ccggcttaag cggcatcttg ctggttagtt taactctgcc
      121 ctaacggtcc tcaaaaaaat caattgacgc ggtcacggtc gcgtcgattc taaacgaggg
      181 cgtgcccgag cttcccgacc tcaaccacct gagccacgcc gaaaaggacg cgctgatccg
      241 ggcgctgtgg acgcaggtgc agaggctgac ggctcgggtt gcggcgctcg aagcgagact
      301 cggcgaaccg tcgaaaaccc cagacaattc cagcctgccg ccgtcgaagg ggcagaaacc
      361 gaacaagccg gagaaaacca agcgtgttgg accccgcccg ggcagccttg gccgcaaagg
      421 aggcggtcgc cccttggcct gcgatcctga cgagacggtc accgccaagc cagtggcttg
      481 cgcacaatgc caggccgtgc tgacagacac cgatcacgtg ctgcacggtc gttacgacaa
      541 gatcgacctg ccggtggtgc gccccctggt gacccgagta gaacgctatg cggggcattg
      601 cgcgtgctgc ggcggcgtca ccctggcagc gatccccgcg ggcctcgaag acggctcgcc
      661 gttcagcgtc catatcatgg cgctggcgct ctacctgcgc ttcacccacg cgatcagcta
      721 ccgccgcctg agccagttgt ttctgcacct ctatgcactt cagatcagcg agggcgcgct
      781 ggatgcgatg ttgcagcgtg ccaagccgtg tttcgacagc gaggtgatgg ccattcttgc
      841 gcggttgcgc cgctcacgga tcgtcggctg cgatgagacc tcggtgcgca ttgacggtcg
      901 gacccactgg aattgggttt tccagaacga tcaggtggtg atccacgtcg tgcgcaacag
      961 ccgtgccgcc agcgtggtca ccgagacgat ggcgggtcat cggcccagca tctgggtgtc
     1021 cgacctctat ggcgcgcagc aggggcatgc cgatctgtgg caggtctgtc tggcgcatca
     1081 actacgtgac tgcaaatacg ccatcgaggc cggcgatacg atcttcgctc cacagatgaa
     1141 ggcgctgctg ctgcgcgccg tcgtgctggc gaggcggcgc aaaagcctgg ccgagagcac
     1201 gcggcgcagc catctgcgaa ggctggatca cgcgttgaac gcgatcatgg tgctggcacc
     1261 gaccaacagt catggcaggc ggctgcgaaa acgttacggt aaggtgcgaa gccacctgtt
     1321 cactttcctg gagcatcccg acgctccgcc ggacaacaat gccagcgaga gggaattgcg
     1381 gcccacagcc acgtaccgca aagtcaccgg tggctttcgt tcgaagtggg gcgctgatct
     1441 gttcgctggc gtccgatccg tcgtgggtac cgccgcacga cggggacaga acgcgtatca
     1501 ggcaatttgg gcagtcctcg acggcgagtc tgtcattcag acgggttgag cagatactcg
     1561 ctgccgttaa tgatctccag atacgaccat ttgagagcat ccgtgacttc gacccg
//
LOCUS       DATAVD010001291         4574 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_494573, whole genome shotgun sequence.
ACCESSION   DATAVD010001291 DATAVD010000000
VERSION     DATAVD010001291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4574
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_494573"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            235..459
                     /locus_tag="VHX39_24525"
     CDS             235..459
                     /locus_tag="VHX39_24525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994351.1"
                     /translation="MATPQNSNRTHRRGPSIVDCVLALSVIAGLAFVTVRMMSMGTPP
                     AVTQTAETGTAVVKTDPLPLAPDAADVKTP"
     gene            560..1603
                     /locus_tag="VHX39_24530"
     CDS             560..1603
                     /locus_tag="VHX39_24530"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3994352.1"
                     /translation="MTATRRRLLTASIGLAMPAVRSVRAAPKSITFAAYGGLFQDLYE
                     PAIVQPFAWAHHDIGVLYYALPSVAQTLALLRRQRDLPDIDVVLLDLAAARTATAEGL
                     LEPVSTAAMPILSELAPDMVFPGVAGPALFTEPLVLLFDAAHARPEPSWKALWNTTES
                     RSIAIAAPPDNAGIAFAVVAARLFGGGNETHALDAGITAIGELARKVVTWDPSPDVDR
                     YIGEGNAKLGVGWNMAAQIWSDRLGGRLGVAFPAEGTLSRVITVNLVKGSRQPEAARQ
                     FMAWLLGADAQRTMVETMFLGPVNAKTKYVEGALLRTANTPERVAHAMPVDWVSVGAM
                     RQAIEHRWHKVAG"
     gene            1652..2833
                     /locus_tag="VHX39_24535"
     CDS             1652..2833
                     /locus_tag="VHX39_24535"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3994353.1"
                     /translation="MITRRAALISSAAGSMFGTRAFAADSIRIGMPVALTGPLGSVGE
                     QMRRGAELWAKVQNAKGGVLGRPIQLFISDTGGDPATCVRKAQEAVERDGCHLLFGMT
                     LSSEALAVVPKLAEWNAIFISSDNGDGRLTGESFVPNFFRANISGPMGARAVSLYLRD
                     APFKRFYGLGMDYAWGRNSVAVFEGEMKRAGKEFVGSVFSPTGTKDFSPYITKIRNSG
                     ADAMYFALAGDDLNAFLAQAKQYRLSEKVQMLTEVVDMITVRAVGDAAIGLVGSTRYS
                     AAIDTPANAAFVALWQKEYGRAPDGNDGEQWQACQILQAGIEAAGSTDIEPLRAALAK
                     VAIDGVKGHVAMRACDHQVLQSGYILRVEKGETGPEPKIIATFPADRTAPACLQMTYD
                     D"
     gene            complement(2838..3839)
                     /locus_tag="VHX39_24540"
     CDS             complement(2838..3839)
                     /locus_tag="VHX39_24540"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3994354.1"
                     /translation="MPRMRSTLLFLMAMAILSLTACASRLEPPGPAVVQPSTATDAFV
                     MPDGFHLPYRLWLPASPHPRAVVLALHGMNDSRDAWEIPAPDLATAGIAVYSPDLRGF
                     GGTASRGYWPESQGLVDDARVMTGLLERRYPGVPIYLMGESMGAAVLMVLSTEPHAPH
                     VAGYVLVSPAVWGRAEMSPFLRGTLWLAVHTVPGMLLENRGYVKITASDNHAALVRLS
                     EDPLTIHKTRVDATEGLVNLMDKALASAKQFRARALFIYGGKDDLIPKQATLATWRAL
                     PKGDVTLGYYKDDYHLLMRDLQRKTVIDDVVAWMKDPAAPLPSGADVAAQAWMKQEK"
     gene            3882..4064
                     /locus_tag="VHX39_24545"
     CDS             3882..4064
                     /locus_tag="VHX39_24545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HEX3994355.1"
                     /translation="MSDGAALPPETFHVDDRTVACDGGPLGHPRVFLYIEEHEVVCPY
                     CSRVYILNEGGGHGGH"
     gene            4171..>4574
                     /locus_tag="VHX39_24550"
     CDS             4171..>4574
                     /locus_tag="VHX39_24550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEX3994356.1"
                     /translation="MTRPDGTPVNAVFGFTNMLAKLLKEHVGTHIAVIFDAGRLTFRN
                     RLYDAYKAHRPPPPEELIPQFALVRQATEAFGVPAIELADWEADDLIAAYALATTQAG
                     GQVTIVSSDKDLMQLIRPGVEMLDPIKQKPIGP"
BASE COUNT          834 a         1476 c         1433 g          831 t
ORIGIN      
        1 ctgtcctaca cccgctccgc tgttccacca ctcctgggcc ggcgtgcatc gaccggtgcg
       61 ttgtcctgcc gccggaattt acccgggttt tccgcccgaa taccgatccc gtttgcggcg
      121 aagtcgtaaa ttttggtaac ccggtcggcg atcctggacc cgtaaggatt tcgtaaccaa
      181 tcttacagta caatggccga agttaagtca cactcattca atggagttca attcatggcg
      241 acgccgcaga attccaatcg aacccaccgg cgcggcccgt ccatcgtgga ctgtgttttg
      301 gccttgagtg tgatcgccgg tctggcgttc gtgacagtcc gcatgatgag catgggaacg
      361 ccgcctgctg taacccagac cgccgagacc ggcaccgcgg tggtgaagac cgatcctctg
      421 ccgctcgcgc cggatgccgc cgacgtcaaa accccttgac gacatcggca gcgatgccgg
      481 ggtatcgggg ctgatttgac acaaccttga agcaagctct gctaccgggc acatggttcc
      541 ggccagggag gcttgcttga tgaccgcgac ccgccggcgc ctgctgacgg cctcaatcgg
      601 cctcgccatg ccagcagttc gttcagtacg ggctgccccg aagagcatca ccttcgctgc
      661 ctatggcgga ttgtttcagg acctgtacga acccgcgatc gtgcagccct tcgcctgggc
      721 gcatcacgat atcggcgtgt tatactacgc gctgccgtcc gtcgctcaga ccctcgcgct
      781 actgcgccgg caacgcgatc tgccggacat cgatgtcgtg ctgttggacc ttgccgcggc
      841 gcgaaccgcc accgcggagg gattgctgga gccggtctcc accgcagcca tgccgatcct
      901 gagcgaactg gcacccgata tggtgttccc cggcgtcgcc ggtcctgcgc tgttcaccga
      961 gccgttggtc ctgctgttcg atgccgctca cgcccgcccg gagccgagct ggaaagccct
     1021 gtggaacacc acggaatccc gctcgatcgc cattgccgcg ccgccggaca acgcgggtat
     1081 cgcgttcgcc gtcgtcgccg ccaggttatt tggcggcggt aacgaaacgc acgcgctgga
     1141 tgctggcatc accgcgatcg gcgagctggc ccgcaaggtc gtcacctggg atccgtcacc
     1201 tgacgtcgat cgttacatcg gcgagggcaa cgccaaactc ggtgtcggct ggaacatggc
     1261 agcacagatc tggtcggatc gtttgggcgg acggctcggc gtggcgtttc cggcggaggg
     1321 cacgctgtcg cgggtcatca ccgtcaacct cgtgaaaggc agccgtcagc cggaggcggc
     1381 gcgccagttc atggcgtggc tgctcggcgc ggacgcgcaa cgaaccatgg tcgagacgat
     1441 gttcctcggc ccggtcaatg ccaaaacgaa atatgtggaa ggcgcattgt tgcgtaccgc
     1501 caacacgccg gaacgtgtgg cgcatgccat gccggtcgat tgggtttcag tcggcgccat
     1561 gcggcaggcg atcgagcatc gctggcacaa ggtcgccggt tgaatctgtt ccccgttggt
     1621 gacagggttc gccaacaggg aggcaaacaa catgataact cgcagggctg cgctgatctc
     1681 gtccgccgct ggatcaatgt tcggaacgcg ggcgtttgcc gccgattcga tccggatcgg
     1741 catgcctgtg gcgctgaccg gtccattggg ctcggtcggc gagcaaatgc gccgcggtgc
     1801 agaactctgg gctaaagtcc aaaatgccaa aggcggtgtg ctgggccggc cgatccaatt
     1861 gttcatttcg gacaccggcg gcgatcccgc gacctgcgtg cgaaaagccc aggaggcggt
     1921 ggaacgggac ggatgtcatt tgttgttcgg catgaccttg tcgtcggaag cgctcgcggt
     1981 ggtgccgaaa ctcgcagagt ggaacgcgat tttcatttcc tcggacaatg gcgacgggcg
     2041 gctgaccggg gaatcgttcg tgccgaattt cttccgtgcg aatatctcgg gtccgatggg
     2101 ggcccgggcg gtctcactgt atttgcgtga cgcgcccttc aaacgcttct acggactggg
     2161 catggactat gcctggggcc gcaacagcgt ggcagtattc gaaggtgaaa tgaaacgggc
     2221 ggggaaggag ttcgtcggtt cggtgttctc gccgaccggg accaaggact tttcgcccta
     2281 catcacgaag atccgtaatt ccggtgcgga tgcgatgtat tttgctctgg ccggcgacga
     2341 cctgaacgca ttcctggcgc aggcgaaaca atatcggctg agcgaaaagg tccagatgct
     2401 gaccgaggtc gtcgatatga tcacggtccg cgcggtgggt gatgcggcga tcgggctggt
     2461 tggctcgacg cgctactccg ctgcgatcga tacgccggcg aacgcggcat tcgtcgcgct
     2521 gtggcagaag gagtacggcc gcgcgccgga tggcaacgat ggcgagcagt ggcaggcctg
     2581 ccagatcctg caggccggga tcgaggcagc cggcagcacg gatatcgagc cattgcgtgc
     2641 ggcactggca aaagtcgcga tcgatggcgt gaaggggcac gtggcgatgc gcgcctgcga
     2701 tcaccaggtg ctgcagtctg gctacatcct gcgcgtggaa aaaggcgaga ccggacctga
     2761 accgaagatc atagcgacat ttcccgcaga ccggacggcg ccggcgtgtt tgcaaatgac
     2821 ctacgacgat taagcgctca cttctcctgc ttcatccacg cctgtgccgc aacatccgcc
     2881 cctgacggca gcggcgccgc cgggtccttc atccatgcca ccacgtcatc gatcaccgtc
     2941 ttccgctgca gatcgcgcat cagcagatga tagtcgtcct tgtaataccc caacgtcaca
     3001 tcgcccttcg gcaatgcccg ccacgtcgcc aaggtcgcct gtttcggaat cagatcatcc
     3061 ttgccgccat agataaacaa cgcccgcgcc cggaactgct ttgccgaggc cagcgcctta
     3121 tccatcaaat tcaccagacc ctcggtcgca tcgacccggg ttttgtgaat ggtcaacgga
     3181 tcctccgaca gccgcaccag cgccgcgtga ttgtcgctgg cggtgatctt cacgtagccg
     3241 cggttctcca gcagcatccc gggcacggta tgcaccgcaa gccacaatgt gccgcgcaga
     3301 aaagggctca tttcggcccg cccccacacc gccggcgaga ccagcacata gcccgccacg
     3361 tgtggcgcat gcggctcggt cgacagcacc atcagcacgg cggcacccat gctctcgccc
     3421 atcagataga tcggcacccc cggataacgg cgctccaaca gcccggtcat gacccgtgca
     3481 tcgtccacga ggccttgact ctccggccag tacccgcgcg aggcggtgcc gccgaaccct
     3541 cgcagatccg gcgagtacac cgcgatcccg gcagtggcga ggtcaggagc cgggatctcc
     3601 cacgcgtccc ggctgtcgtt catcccgtgc agcgccaaca ccaccgctcg gggatgcggg
     3661 ctggctggca gccacagccg gtagggcagg tggaacccat ccggcatcac gaaggcgtcg
     3721 gtggcggtcg agggctggac caccgccgga cccggcggct ccagccggct cgcgcaggcg
     3781 gtcagcgaca ggattgccat cgccatcagg aagagcaagg ttgaacgcat gcgtggcatc
     3841 gctatcatcc cactcagaag cccaccagac cgaggaccca aatgtcggat ggcgccgctc
     3901 tccctccgga gacatttcat gttgacgacc gcacggttgc ctgtgacggc ggccccctcg
     3961 gccacccgcg ggtgttcctg tacatcgagg agcacgaggt ggtgtgcccg tactgctcgc
     4021 gcgtctacat cctgaacgaa ggaggcggcc acggcggaca ttgacttaga gacagttccc
     4081 ctggcgaccg aggcagggga cgctgccaaa cacctggtgc tgatcgacgg ctccgggttc
     4141 attttccgtg cgttccatgc gttgccgccg atgacccggc cggacggcac gccggtgaac
     4201 gcggtgttcg gtttcaccaa catgctggcg aagctgctga aggagcatgt cggcacccat
     4261 atcgcggtca ttttcgacgc cggccggctg accttccgca atcgcctgta cgacgcctac
     4321 aaggcgcatc ggccgccgcc gcctgaggaa ctgatcccgc aattcgccct tgtgcggcaa
     4381 gcaaccgagg ccttcggcgt tccggcgatc gaactggcgg actgggaggc cgacgacctg
     4441 atagccgcct atgccctcgc cacgacgcag gccggcggcc aggtgaccat cgtgtcctcg
     4501 gacaaggatc tgatgcagct gatccgcccg ggtgtggaga tgctggatcc gatcaagcaa
     4561 aagccgatcg ggcc
//
LOCUS       DATAVD010001292         1605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1422854, whole genome shotgun sequence.
ACCESSION   DATAVD010001292 DATAVD010000000
VERSION     DATAVD010001292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1422854"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..864)
                     /locus_tag="VHX39_24555"
     CDS             complement(<1..864)
                     /locus_tag="VHX39_24555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994357.1"
                     /translation="MNTDQLDQDPFRDPNIPSLAQALENFAARPDETPSRKMRARGAV
                     AMFGRLRGKRPDKIPAQPNFVIHEFARLRTRPTNLHPKSIANCKAEIRYLLEKCGTAT
                     GRSRFRPLSPDWAALREQLTHKEGSDEKFKSKALFWKISRFAAFCSAKGVPPSAVTDA
                     VLNEFRDALQASAEVIRPEAKVREAIRAWNTIAGNSSPALPTLFLAPTVVRRWTIAPA
                     DFPQEFQNDVEQWSIEMREVDPDAEEGRTRALRPDIDGAPLRLLLILFGHGASAFSRR
                     PKNRGPFHFVPV"
     gene            complement(1020..1436)
                     /locus_tag="VHX39_24560"
     CDS             complement(1020..1436)
                     /locus_tag="VHX39_24560"
                     /inference="COORDINATES: protein motif:HMM:NF024139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3994358.1"
                     /translation="MAFKESRISAGWPFFQPSEHGVYAVVITQSGQEIMSVGRSMKSI
                     NLSAKVQRRRGATSSGGAPTPEIIQSEALQPPRALVWLSSRQAAARSGYSVRTLKRWI
                     AAGYLSASRTLSPQGMGHLRIRLGDLESFMASGALA"
BASE COUNT          327 a          468 c          475 g          335 t
ORIGIN      
        1 caccggcaca aaatggaatg gcccccggtt ctttggcctt cgtgagaagg cacttgcacc
       61 atgaccaaac aaaatcagaa gcaatcgcag cggtgcgcca tctatatccg gccgtaacgc
      121 ccgagtgcgt ccctcctcag catccggatc gacctctctc atctcgatcg accactgctc
      181 gacatcattc tgaaattctt ggggaaagtc tgccggagca atcgtccaac ggcgaacgac
      241 tgtcggcgcc aagaacaagg tgggcagggc tggagaagaa ttgcccgcga tagtattcca
      301 ggcgcggatg gcctcccgta cttttgcttc cggacggatt acctcggccg atgcctgcag
      361 ggcgtcgcga aattcattca ggacggcgtc ggtgaccgca ctcggcggca cgcccttagc
      421 ggaacagaat gccgcgaacc gcgaaatctt ccagaagagt gccttcgact tgaacttctc
      481 gtccgaaccc tctttgtgcg tcagctgctc ccgcaacgcc gcccagtctg gcgacagcgg
      541 acggaagcgg gaacggcctg tggcagttcc gcacttctcc agcagatagc gtatctcggc
      601 cttgcagttc gcaatcgatt tcggatggag attggttggg cgcgtccgca gccgcgcgaa
      661 ttcgtgtatc acgaaattgg gctgggccgg gatcttgtcc ggccgctttc cccttaggcg
      721 gccgaacatc gcgactgcgc cacgcgcccg cattttcctc gaaggtgtct catccgggcg
      781 agcagcgaag ttctcgagtg cctgcgccag tgacggtata ttgggatcgc gaaaggggtc
      841 ttggtcaagt tgatcggtat tcatgggaaa gtttctccgt tttgagttag tgacaaagga
      901 tgacaaagcg gtcttcggac tggattttgg gaagtcgtat caccattgat gggtgcctat
      961 tccgtcgcag cgtcttcccg aagggcgcga aaaccgagac aaaccgtgac attccgtact
     1021 cacgccagcg ctccgctcgc catgaaggat tcgagatcac cgagacgaat gcggaggtgg
     1081 cccatgcctt ggggcgaaag ggttcggctg gccgagagat atcccgctgc aatccaccgt
     1141 ttcagggtgc gaacgctgta gccggaacgc gcggcggctt gtctgcttga gagccagacg
     1201 agcgcccgcg ggggctgcag cgcttccgac tggatgattt ccggtgttgg tgcgccgcca
     1261 cttgatgtcg cgccacgccg gcgctgcacc ttcgcggaca aattaatgga cttcatggat
     1321 cggccgacgc tcataatttc ttggccggat tgtgtgatca cgactgcgta gacgccatgt
     1381 tcactcggtt ggaagaacgg ccaacccgca gaaatcctgg attccttgaa agccaatggc
     1441 agggcgcaag agcggtcaca caccaccagg cactgcggtc agcaataccg aaggcaggtc
     1501 actgagtctc ttgacaattt caggcgtgat ggtccggttc ctgcgaatct gcctgtgcct
     1561 gctgtcgtcc cggacctgca ggatcgacga acatcgcagc ttatt
//
LOCUS       DATAVD010001293         6178 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2545109, whole genome shotgun sequence.
ACCESSION   DATAVD010001293 DATAVD010000000
VERSION     DATAVD010001293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6178
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2545109"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..427)
                     /locus_tag="VHX39_24565"
     CDS             complement(<1..427)
                     /locus_tag="VHX39_24565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX3994359.1"
                     /translation="MVRGNMKRMAPIRILLASCLLSAAASVAFAQSKTPGGMPPPTGM
                     SLADSTAMRFPQPVRVGDLIGREVLRPVESQDVLGRVRRLVRDGHGQIMVVVDFGGFL
                     GFGARPIAVPVDAMVLLGQDMEIVAFTPRQLRQLPTFSPA"
     gene            complement(409..1182)
                     /locus_tag="VHX39_24570"
     CDS             complement(409..1182)
                     /locus_tag="VHX39_24570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX3994360.1"
                     /translation="MKSPFRPDVVPNATILDDHKPLIRSLERRGLIRGGLSLGALVML
                     TGCDPDRPESVESALLAISRFNDGVQAFLFNPNKLAPTYPASMILRPPKFNAYYDVMD
                     VKPVNGTTWRLDVSGLVAEKRAWSLPDLQALPQTSMVIKHICVEGWSYIGGWTGVPLR
                     IFLERIGADLRAKYVAFKTADNYPSSIDMATALHPQTMLALKYGGETLADPFGFPMRL
                     RMATKLGYKNPKWVTAIEVTNTYPGGYWEEKGFPWFAGI"
     gene            complement(1179..1856)
                     /locus_tag="VHX39_24575"
     CDS             complement(1179..1856)
                     /locus_tag="VHX39_24575"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEX3994361.1"
                     /translation="MNQVKAETTAPAMRPGRRLHPVPIRIMHWVNAVVMLVMITSGWG
                     IYDDDVIIRGFHFSQFWRMGDWAAWSLNWHFAGMWFLAINGLIYLIYGVVSGRLREKL
                     LPIRPSEVVQTIVDTLHFKIAHEDLTVYNAVQKLLYIVVILAGISQVVTGLAIWKPVQ
                     FSGLVSLLGGFQSARVLHFAGMAVIVGFLIVHVALALLVPKTLWAMVAGGPRLAPRSR
                     TKEGHAT"
     gene            complement(1909..2550)
                     /locus_tag="VHX39_24580"
     CDS             complement(1909..2550)
                     /locus_tag="VHX39_24580"
                     /inference="COORDINATES: protein motif:HMM:NF018264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1109 domain-containing protein"
                     /protein_id="HEX3994362.1"
                     /translation="MRTDSLVDRLSQELRPVRRRSITREALLLLLLAVVEVAAFLGMG
                     FMRPDIHAAMEAPSFWWKLASMGLIAVMGAGIAILSADPVRSPRRGLRWILICIVVIF
                     ASGWLIDAAGHGLADLVRRLDWTQGLQCVWKMVALSIPPAIALGVLIRRGAPTDRAGT
                     ALAAALSSAAWGAFVFVFACPSDDPLYIAIWYTVGCSIVTILARAILLRLSRW"
     gene            complement(2540..3043)
                     /locus_tag="VHX39_24585"
     CDS             complement(2540..3043)
                     /locus_tag="VHX39_24585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX3994363.1"
                     /translation="MAAAQVGDANAYRTLLAELAVWLRRYYARRLPSAMTEDAVQDVL
                     LAIHEKRHTYDPVRPFGPWLAAIARYKWIDRLRSLKTEATEPLDENIGVPDHGDAVIA
                     GSTFQQLLAELKPPQAEAIRLVKLEGYSVEEASRATGQSVSLIKVNIHRGTRRLADII
                     RADGDAD"
     gene            complement(3439..3807)
                     /locus_tag="VHX39_24590"
     CDS             complement(3439..3807)
                     /locus_tag="VHX39_24590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994364.1"
                     /translation="MKSIKLSDTLMVAGLLLAAPAVAQTTPNSTPTAQKQRTDGGGMA
                     DNPRATDATAAAWRKQHIDGGGSPDNPRATDATAAAWRKQHIDGGDSPDNTASAQKQS
                     AQSLSHAAPPFVDGPVAKRQ"
     gene            complement(4017..4568)
                     /locus_tag="VHX39_24595"
     CDS             complement(4017..4568)
                     /locus_tag="VHX39_24595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994365.1"
                     /translation="MIRLVARLEQNAPRRKTPSESVDFENKLGRELASIFDSLAIAPH
                     AQLRACSRPVRDIARNLIDLFGPGVGHIAVTTSVERLALPAFQQRALVLLTSELIING
                     LLHAFENRTTGRIALRLARPNRGIARLVVTDDGSGLVGAKPHHAAQCGVINDLADLLQ
                     SEVTYRSAPGAGTVAEIDIRLQE"
     gene            5356..>6178
                     /locus_tag="VHX39_24600"
     CDS             5356..>6178
                     /locus_tag="VHX39_24600"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX3994366.1"
                     /translation="MALPDRRAVYRSGDWEVDLIRRELRAKGNPIGVRGLAFEIIEVL
                     VKAAGELVTKQNLFDTIWPGTAVGENTLNVHLSGLRKALGADRGMVKTIAGRGFRLLG
                     NWTTATDDLVDIPIAVERARLPIAQPTTNLPTLAEELIGRTAAVQRLIGLVTANRMVT
                     LTGAGGIGKTALALEVARGLLPGFNGDCRVVGLASLSNPELVASAAGSALGIEWSGDE
                     ITPASVAQAIGTKKILLVLDNCEHLVSAVARLAETILWMCPYASVIATSREILRIA"
BASE COUNT         1211 a         1889 c         1958 g         1120 t
ORIGIN      
        1 cggcgggcga gaacgtcggg agctgccgga gttgcctggg tgtgaaggca acgatctcca
       61 tgtcctggcc aagcaacacc atcgcatcca cgggcaccgc gatcggccgg gctccgaagc
      121 ccaggaaccc gccgaaatcc accacgacca tgatctggcc atggccgtcg cgcacaaggc
      181 ggcgaacccg tccgaggacg tcctggctct ccaccggacg aagcacctcc ctgccgataa
      241 gatcgccaac gcgcaccggc tgcgggaacc gcatggccgt ggagtccgcc aggctcatcc
      301 cggtgggagg cggcatgccc cccggtgtct tgctctgtgc aaaagccacg ctcgcagccg
      361 cgctcaacag gcacgatgca agcaggatac ggatcggcgc catgcgcttc atattcccgc
      421 gaaccatgga aagcccttct cctcccagta cccgccggga taggtgttgg tgacctcgat
      481 ggcggtgacc catttggggt ttttgtatcc cagcttggtc gccatgcgca gccgcatcgg
      541 aaatccgaac ggatcggcca gcgtttcgcc gccgtattta agcgccaaca tggtctgcgg
      601 atgcagcgcc gtcgccatgt cgatgctgct cgggtaattg tcggctgtct tgaaagcgac
      661 gtatttggcg cgaagatcgg cgccgatacg ctcgagaaag atccgcagcg gcacgccggt
      721 ccacccaccg atgtagctcc agccctcgac gcagatatgc ttgatgacca tcgaggtctg
      781 cggcagcgcc tgaagatccg gcagcgacca ggcgcgcttc tcggcaacga ggcccgacac
      841 atcaaggcgc cacgtcgtcc cgttcaccgg cttcacatcc atcacgtcgt aataggcgtt
      901 gaacttgggc ggccgcagga tcatcgaggc ggggtaggtc ggcgcgagct tgttcggatt
      961 gaacagaaac gcctgcacgc cgtcgttgaa ccgcgatatc gcgagcaggg cggattcaac
     1021 cgattcgggc cggtccgggt cgcatcccgt cagcatgacg agcgcgccga gggacagccc
     1081 gccccggatc agcccgcgcc gttcgagcga gcggatcagc ggcttgtggt cgtcgaggat
     1141 agtcgcattc ggaacgacgt ccggccggaa cggcgatttc atgtcgcgtg gccctccttg
     1201 gtgcggctgc gcggggcgag acgcgggcca ccggccacca tcgcccacaa ggtcttcggc
     1261 accagcagcg ccagcgcgac atgcacgatc aggaaaccga cgatcaccgc catcccggcg
     1321 aaatgcagca cccgcgcgct ctggaaacca ccaagcagcg agaccaggcc ggagaactgg
     1381 accggcttcc agatggcgag gccggtgacc acctgggaaa taccggcgag gatgacgacg
     1441 atataaagca gcttctgcac cgcgttgtag actgtaaggt cctcgtgggc gatcttgaag
     1501 tgcagcgtat cgacgatggt ctgcaccact tcggacggcc ggatcggcag cagcttctcg
     1561 cgtaatcgtc cgctcaccac gccgtagatc aggtagatca ggccgttgat ggccagaaac
     1621 cacatgccgg cgaaatgcca gttgaggctc caggccgccc aatctcccat ccgccagaac
     1681 tggctgaaat ggaacccacg gatgatcacg tcgtcgtcgt agatgcccca gcccgacgtg
     1741 atcatgacca gcatgaccac ggcattgacc cagtgcatga tcctgattgg caccggatgc
     1801 aggcggcggc ccgggcgcat cgccggggca gttgtttcgg cttttacctg gttcatgaat
     1861 gcaatctcac cgggaacgtt gatggggggt ggccgagatg ttgccgcgtc accatcgcga
     1921 cagccgaagc aggattgccc gcgccagtat ggtcacgatc gagcagccga ccgtgtacca
     1981 gatcgcgatg tagagcggat cgtccgacgg gcaggcgaag acgaagacga acgcgcccca
     2041 cgccgcggac gaaagcgccg cggcaagtgc tgtgccggcg cggtccgtcg gtgcgccccg
     2101 ccgtatcagc acaccgagtg cgatggcggg aggaatagac agcgccacca tcttccagac
     2161 gcattgcaga ccttgcgtcc aatcgaggcg gcgaaccagg tccgcgagtc catggccggc
     2221 cgcgtcgatc agccagccgc tggcgaagat cacgacgatg cagatcagaa tccagcgcag
     2281 gccgcgacgg ggcgaccgca ccggatcggc cgacaggatc gcgatacccg cgcccatgac
     2341 ggcgatgagc cccatgctgg cgagtttcca ccagaacgag ggcgcttcca tcgccgcgtg
     2401 gatatccggg cgcatgaaac ccatgccgag gaacgcagcg acctcgacaa cggcaagcaa
     2461 cagcagcagc agcgcttccc gcgtgatact gcgccgccgg accgggcgaa gctcctggct
     2521 gagacgatca accagggagt cagtccgcat cgccatcggc cctgatgatg tcggcgaggc
     2581 gcctggtgcc gcgatgaata ttcaccttga tgagtgagac cgactgaccc gttgcgcgcg
     2641 acgcctcttc gacgctgtag ccctcaagct tcaccagccg gatcgcttcg gcctggggag
     2701 gcttcagttc agccagcagt tgctggaacg tcgagccggc gataacggca tcgccgtgat
     2761 ccggcacgcc gatgttctca tccagcggtt cggttgcttc ggtcttgagt gaacgcagcc
     2821 ggtcgatcca tttgtagcgc gcaatggcgg cgagccaggg cccgaagggg cgcaccggat
     2881 cgtaggtgtg gcgcttttcg tggatcgcca gcaggacgtc ctggaccgca tcctcggtca
     2941 tggcggatgg caggcgccgg gcgtagtacc ggcgcagcca cacggccagt tcggcgagaa
     3001 gagtcctgta tgcattcgca tcccccacct gcgcggcggc catcatctga tcccagttct
     3061 ggccggacgc atcgccggca ctggtcctcg cggttggggc catatcggat taatccggca
     3121 gggaagccgg cgccgcacgc gacacctgct catcccaatg gccccgaaca gagtgttcgg
     3181 gaccgccttg cgtccggtta cacgcgtgga cgatacatcg ttggatcaag acggggcgcg
     3241 gggcatgact tgcccggtgg cgcgggtcac agggacgcca ggaagcagtc atccaagagt
     3301 ttcgatgtcg acgcatgtcc ccccggctct gtccctatgt gatggcgata cagacccaat
     3361 ccgtactctg cgatcgagga gggatttgag gaacaaaccg gggctgctgg cgccgggtta
     3421 gcggtcggtt ggccgatatt actgccgctt ggccacgggc ccgtcgacga agggcggggc
     3481 tgcatggctc aggctttgag cggactgctt ttgagcagat gccgtattat ccggcgaatc
     3541 gccgccgtcg atgtgctgct tccgccaggc tgccgccgtc gcgtctgtcg ccctcgggtt
     3601 atccggcgag ccgccgccgt cgatgtgctg cttccgccag gctgccgctg tggcatcggt
     3661 tgcccgcggg ttgtcagcca tgccgccgcc atcggtgcgc tgtttctgcg ccgttggcgt
     3721 gctattcggc gtagtttggg cgacggcagg ggctgccaac agcaagccag caaccatcag
     3781 cgtgtcggaa agtttgatac tcttcacaat gctctcccgt cacaaggatt gttggcaagg
     3841 atgccctttt cgtctgcatc tgcgcaagga gataccgctg ctgttggcta tagataggac
     3901 aagtgcaacg cgaattgtat aatgcgtgcg ttctcgcggc ctggaccaca aggtcggcaa
     3961 cttatcgggc ggcatgctgg gatcaggggc gcctcatccg gccaggaaat cgatggttat
     4021 tcttgaagcc ggatgtcgat ttcggcgacg gtgcccgcac ctggcgccga ccgatacgtc
     4081 acttccgatt gcaacagatc cgcgagatca ttgatgactc cgcactgtgc ggcatgatgc
     4141 ggtttcgcac cgaccaggcc actgccgtcg tcggtcacaa ccagacgcgc gatgccacga
     4201 ttcggccgag cgagccggag cgctatgcga cccgtggtgc gattttcgaa cgcgtgcaaa
     4261 aggccattta tgatgagttc gcttgtcaat aggaccagcg cacgctgctg aaaggcgggc
     4321 agtgcaaggc gttcgacgga ggtcgttacg gcaatgtggc ctacgccagg tccgaacaaa
     4381 tcgataaggt tgcgcgcgat gtctcgtact ggacgggagc aggcacgcaa ttgcgcatga
     4441 ggggcgattg ccagcgagtc gaagatcgag gcaagttcgc ggccgagctt gttctcgaaa
     4501 tccactgatt ccgatggggt ctttcgtcgt ggggcattct gctcgaggcg cgcaacgagc
     4561 ctgatcatac tatgggctcg atgcagtgcc tcggttgccc aaatcggcct gagtagcggg
     4621 gggccgccgc acagggctgg cggtgcggcc ggaagcaaga tgccaagcag cttcacgcgt
     4681 tggggggaga tgctggccgc cgcggaagcg atctgctcaa actgagacgt tcgcagacgg
     4741 tcggccgttg gatggttgta gagtcctcgg agagaaccac ccatgcgatt ttgcgaggcc
     4801 accagttctt cttcgctacc acgagatatg tcatacgttc ggcccaatat tatgatatcc
     4861 atcgcaacgt cttccactta ttcgagaccg acgttactcg aaatttagct gagccaattg
     4921 gacggatccg gcgcccctgg tccaaaaccg ccgtgtatca actacacgca cggtgacgaa
     4981 tatcagccgt gggtccgaga catccggaaa actcgttggg ccccaagctg cccgacatat
     5041 cccccgaggc gattttcccc atcgccgggc cgataaaaac ccgggtccat caacttcgtg
     5101 atccgctcct ggctggccgg ccggagcgac gatctgcccg gcgacccgct gaactccgtc
     5161 atgctgacgc tccaccacgg catggttcgg aacaaaagta caaccgcgcc acccagcacg
     5221 gaatttgcgg aaaacccaat tttcgacacc gattgacacc ggtgcgtcac acttcttgag
     5281 cgaccgacgg cgaaggtctt gccggctctc aatttttagg caaaaactaa aggaacctta
     5341 aggaacctta agttcatggc tttgccagat cgtagagctg tgtaccggtc cggtgactgg
     5401 gaggtcgatc ttattagacg tgagttgcga gcaaaaggga atccaatcgg cgtccgtggt
     5461 ctggcgtttg aaatcatcga ggtcctcgtg aaggcggccg gcgaactggt caccaaacag
     5521 aatttgttcg acaccatctg gccgggaacg gcggtcgggg aaaacaccct caatgtccat
     5581 ctttccggac tacgaaaggc gctcggcgcc gaccgaggca tggtcaagac gattgcaggg
     5641 cgcggctttc gcttgctggg aaactggacg accgcgactg acgatctggt ggacatcccc
     5701 attgctgtcg agcgggccag gttgccgatc gcacaaccaa ccaccaatct cccaacattg
     5761 gccgaggagc tgattggccg gaccgcggca gtgcagcggc tgatcggtct cgtgacggcg
     5821 aatcgcatgg ttacattgac cggcgctggt gggatcggaa agaccgctct tgccctggag
     5881 gtcgcgcgcg ggttgctccc gggatttaat ggggactgcc gggtggttgg gttggcttcg
     5941 ttatcgaatc cggaactggt ggcgagcgca gcgggatccg ccctcgggat agagtggagc
     6001 ggcgacgaga ttacgccggc gtctgtcgcg caggcgatcg gaaccaagaa gatactcctc
     6061 gtgctggaca attgcgagca cttggtcagc gccgtggcgc ggttggcgga aacgatcctg
     6121 tggatgtgtc catatgcttc ggtcattgcg acaagccgcg aaatcctgcg catcgcgg
//
LOCUS       DATAVD010001294         2456 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2915846, whole genome shotgun sequence.
ACCESSION   DATAVD010001294 DATAVD010000000
VERSION     DATAVD010001294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2456)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2456)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2456
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2915846"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(301..1527)
                     /locus_tag="VHX39_24605"
     CDS             complement(301..1527)
                     /locus_tag="VHX39_24605"
                     /inference="COORDINATES: protein motif:HMM:NF033592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HEX3994367.1"
                     /translation="MRGHDAVRFWVRMRNPNSLLSGSWTAIVAAIAGIVDLEATAREF
                     KALQRVRKIRTAEDLLRLALMWGPGRQSFREAAALAGDAGIADLTDKAVEGRLRKMGD
                     WLAHILGALLADRLSQPGWARSGDLAISLVDGSVICAPGKGQDWRLHARYDPARGRFA
                     DLVLTTTREAEAAGRTRICPGHIMVMDRGYARVRNFKAVLEGGGNFITRISWGSVKLY
                     DADAARVDLTALLAGTTQMREVPVWINGLPGASRLVIQPLPPEDAERQRARRVRKANR
                     NSRQINPRTVQAAGFLMLLTSLAADAQPTEQVIALYRDRWQVEIGFKRLKTLGRLDEL
                     PSSDPVLARTWLLAHLIAAVLTDDLANEIVGFPPSPRRANTGTAIALARLGEGEGNLA
                     LGHFTETQTAIARSPG"
     gene            1860..>2456
                     /locus_tag="VHX39_24610"
     CDS             1860..>2456
                     /locus_tag="VHX39_24610"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEX3994368.1"
                     /translation="MPGLSYSAPTTVDDAVKLLAGSSGLAKVLSGGTDLLVQLRSGRL
                     KPELIVDIKNIPGLIGIREENGGLIVGAATPGAVVEAHPGMNKAWPGVVEALDLIGST
                     QVQGRCSLVGNLCNASPAADSVPAMYAAGAVAVIVGSKGRREAPVEQIPTAPGRTSLA
                     KDEFILEFKFPPRPAHSGDAYLRFIPRTEMDIAVVGCGI"
BASE COUNT          449 a          817 c          751 g          439 t
ORIGIN      
        1 caggcgtgcc aactcagacc gccataagtt cgcgcgtatg gggctccgcc ctcagacccg
       61 ccaggggctt tgccccctgg acccccagca aaggtcgagg acctttgcaa tctgtccatt
      121 agcaggggaa tgggaggggc cgacacggat ctcacacggt cacggccggc ccctcccatt
      181 cccctgccaa aatgaatggt tccaaaggcc gctgccccat acgtgcgaac ttatggcggt
      241 ctgagttggc acgcctggag cacgcggcgt cttggggctt cggcgagccg ctggcgaaac
      301 ttaaccaggg ctgcgcgcga ttgcagtctg ggtctcggta aaatggccga gagcaagatt
      361 tccctcgcct tcgcccaggc gcgccagagc gattgcggtg ccggtgttgg ctcgcctcgg
      421 cgagggggga aaaccgacaa tctcattggc gagatcgtcg gtcagaactg cggcgatcaa
      481 atgcgccagc agccaggttc gcgccagaac cggatcgctc gatggcagtt cgtccaatcg
      541 gcccagcgtc ttcagccgtt tgaaaccgat ctcgacctgc cagcggtcac gataaagtgc
      601 gatcacttgc tcagtgggct gagcgtccgc cgccagcgat gtgagcagca tcaggaaccc
      661 ggcggcctgg accgtgcgcg ggttgatctg ccgactgttc cggttcgcct tgcgcacccg
      721 acgggcccgt tggcgttcgg cgtcctcggg cggcaacggc tggatcacga ggcgcgatgc
      781 acctggaagc ccgttgatcc agacaggaac ttctcgcatt tgagtggtcc cggcgagcag
      841 cgccgtaaga tcgacacgcg cggcgtcggc gtcatacagt ttcaccgacc cccaactgat
      901 ccgggtgatg aaattcccgc cgccctccag caccgccttg aagttccgca cccgcgcata
      961 accgcgatcc atgaccataa tgtgacccgg acaaatccgc gtccgcccgg cggcctcagc
     1021 ctcacgggtc gtggtcagca ccagatccgc gaaccggcca cgtgccggat cgtagcgggc
     1081 atgcagccgc cagtcctgac cctttcccgg cgcgcaaatg accgagccat ccaccaacga
     1141 tattgccaga tcaccgctcc tggcccaccc gggttggctg agccggtctg ccagcagcgc
     1201 cccaaggata tgagccagcc aatcgcccat cttgcgcaat cggccttcca ccgccttgtc
     1261 ggtcagatcg gcaataccgg cgtctccggc cagagccgcc gcttcccgaa acgattgccg
     1321 ccctggaccc cacatcaggg ccagacgcaa caagtcctcg gcggtacgga tctttcgcac
     1381 acgctgcaac gccttgaact cgcgcgctgt cgcttcaagg tccacgatac cggcgatggc
     1441 ggcgacgatc gctgtccaac tgccggacag aagggagttc ggattgcgca tccgcaccca
     1501 gaatcgtacc gcgtcgtgac cgcgcaagcc ttagattcgc gcgtatgggg ctttgccccc
     1561 tcggttcgct tcgcgaccca agcccagcaa aggtcgagga cctttgcaat ctatcattgg
     1621 tgctggaatg agaggggccg atcgtgacct cgcaaggccc gtgtcggccc ctctcattcc
     1681 agcaccaaat taatggttcc aagggccgcc gcccttggcg gggtccaggg gcagcgccca
     1741 tggtaggggt taccgggcaa agccccgccc gccacctctc gaccggtgcc tcatgatcgc
     1801 ctaacctgtt tcgtgaagtc gctccgagag gggcgtcaat tatcaatatg ggagccacaa
     1861 tgccaggtct cagttactcc gcccccacga cagtggacga tgcggtcaag ttgcttgccg
     1921 gttcatccgg tctggcaaag gttttgtccg gcgggactga cttgttggtg caattgcgct
     1981 ccggcaggtt gaagccggaa ctgattgtcg acatcaagaa catccccggc ctgatcggca
     2041 tccgcgagga aaacggcggt ttgatcgttg gtgcggcgac ccccggtgcg gtggtcgagg
     2101 cgcatcccgg catgaacaag gcctggcccg gcgtggtcga ggcgctcgac ctgatcggct
     2161 cgacgcaggt gcagggccgc tgctcgttgg tgggcaatct gtgcaatgcc tcaccggcgg
     2221 ctgactcggt gccggcgatg tatgccgccg gcgccgttgc ggtgatcgtc ggcagcaagg
     2281 ggcgccgcga agccccggtc gagcaaatcc caaccgcacc aggccgcacc agcctcgcca
     2341 aggacgagtt catcctggaa ttcaaattcc cgccgcgccc agcgcattcc ggcgatgcgt
     2401 atctgcggtt cattccgcgc acggaaatgg atatcgcagt ggtcggctgc ggcatc
//
LOCUS       DATAVD010001295         6833 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1423531, whole genome shotgun sequence.
ACCESSION   DATAVD010001295 DATAVD010000000
VERSION     DATAVD010001295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6833
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1423531"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VHX39_24615"
     CDS             <1..188
                     /locus_tag="VHX39_24615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994369.1"
                     /translation="KSFGDDGDPSGSILIPIVTGEDQSQSFVADGSLARYANQTNSAA
                     SSACPSTCAMSASIAHA"
     gene            551..1045
                     /gene="bfr"
                     /locus_tag="VHX39_24620"
     CDS             551..1045
                     /gene="bfr"
                     /locus_tag="VHX39_24620"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003624713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEX3994370.1"
                     /translation="MLRDPKVIEHLNTQLTNELTAINQYFLHARILRHWGVTKLGKQE
                     YDESIDEMKHADKLIERILFLDGLPNVQRLNQVAVGETVEEILTADLSLETKALDDLR
                     EGIAYCESVRDYVSRDLLLHILESEEEHVDFLERQFDLIKQIGIERYTLLNAAPAPEQ
                     GPGD"
     gene            complement(1145..2386)
                     /locus_tag="VHX39_24625"
     CDS             complement(1145..2386)
                     /locus_tag="VHX39_24625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HEX3994371.1"
                     /translation="MTGLRSSRRGLLAAAGGLVASAGVVVRGAPAAERPAAATEAFWG
                     DHQAGIVTRQQSHCYFAAFDLTTEKRDDVIALLRTWTNAAARLTAGQTAEPMGTDQDV
                     PGPDSADALGLPAARLTLTFGFGPGLFVKDGKDRYGLAGSRPDALIDLPRFNGDQLVA
                     EKTGGDLSIQACADDPQVAFHAVRQLGRLAYDAVDLRWTQTGFMSRPEDGATTRNLMG
                     FKDGTQSPPDVGKAVWVGEDGPAWMRGGSYMVARRIRMALEHWDRTKVSFQEQTFGRQ
                     KYSGAPLGLKGEFEPLGLDRTDGDENPVIAENAHVRLGNAAANGAAEILRRGYSYNDG
                     VNFTAERWPPWRQGMEYDAGLLFVCYQIDPRTGFVKLFEKMAKFDMLNQFVTHTGGGL
                     FAIPGGVRQGEYVGQRLFETA"
     gene            complement(2383..3537)
                     /locus_tag="VHX39_24630"
     CDS             complement(2383..3537)
                     /locus_tag="VHX39_24630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994372.1"
                     /translation="MTLPFERRHRRVASLLTAALVVLALPARADTPRGFLETVKKHIT
                     LTSTVPDNGDQNPYALVVAPASAGKIHKDDVLIDNFNNISNLQGLGTTIVDYNPATRQ
                     TSLFAKLPHNLPQCPGGVGLTTAMTMLKTGWVIVGSLPSNDGTTRTRGDGCLLVLDSS
                     GKLVDTWTGPDINGPWGNMAVIDNGATATLFISMAGFDLPGPQVRDPASGNPVVVRKA
                     TVLRIELSIPPGKPPAIQSKTVIGSGFSARADRGSFLLGPTGLAIAPDNTLYVSDALD
                     NRIDAIADATTRTTSAGTGQAITKDGLLSHPLALMILPNGHLLSCNAWNGQVVEIDPV
                     AHKQIYAQWIDNNQAQSPPGNGDLFGIAMRPDGKAFYYVEDDMNTVMESR"
     gene            complement(3646..5163)
                     /locus_tag="VHX39_24635"
     CDS             complement(3646..5163)
                     /locus_tag="VHX39_24635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HEX3994373.1"
                     /translation="MPHDIRSTDHQPIARRAHLSPMAGLRLIAVVSAWMGGGAWLHAA
                     HAAPPSLSVPSDEDLQTDQNGAGSSMIDRLGRTSLLLGDMGGLRTELAKYGISFGLQE
                     TSEVLGNVTGGTHKGADYDGLTQMLLQLDTQRAFGWHGGTFNISALQIHGRSLSSDNL
                     QSLQTASGIESDRSTRLWELWYQQKFLDEDRMDIKIGQQSLDQEFMVSQNAGYFINTM
                     FGWPMVPSADLPGGGPAYPLSALGVRLRYRPIDSLTFLLGVFNGSPAANNNGDPQVVN
                     RSGTSFPVHNGVMVIGEMQFTYPALGSMISADAPQPLSRVYKLGFWYDSENFADQAYD
                     FNGVSLGSPASNGIPLNHHGDFSIYAVADQLVWVDPHEGDRTVSVFARVLGAPQANRN
                     LITFSANAGITVHEPFLHRDNDTFGLGLGFAKVSGADSALDQATAAATGAYIPVRGSE
                     TYIEATYQYQATPWLQIQPDAQYVFTPGGGLADPYNPGHRIGNELVLGVRTNILF"
     gene            5303..5659
                     /locus_tag="VHX39_24640"
     CDS             5303..5659
                     /locus_tag="VHX39_24640"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HEX3994374.1"
                     /translation="MPDDRSTCWRAATTSLVLAGLCLCGPAVAADPVQIKITLKDHKF
                     DPAEIHVKTGQPTTLVVTNQDTTPEEFDSSALQVEKVIVGGHYGVIKLHPLGPGRFPF
                     MGEFHPDTAKGVVISE"
     gene            complement(6288..>6833)
                     /locus_tag="VHX39_24645"
     CDS             complement(6288..>6833)
                     /locus_tag="VHX39_24645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011387902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEX3994375.1"
                     /translation="HTIENLGRQSVVAAEAGADMIAPSAMMDGQVAAIRTALDGNGFS
                     GIPIMAYSSKFASAFYGPFRAAAGCDLQGDRKAYQMNPLNGREALRESDQDEAEGADI
                     LMVKPAMPYLDVLSQVRQRSLLPLAAYQVSGEYAMIKFAALAGAVDEHRVVRESLGAI
                     KRAGADLILTYFAMDIARQGF"
BASE COUNT         1300 a         2391 c         1955 g         1187 t
ORIGIN      
        1 gcaagtcgtt tggtgacgat ggcgacccgt caggctcgat attgatcccc atcgttaccg
       61 gtgaagatca gtcccaatcg ttcgtggccg acggatcgct ggcaaggtac gccaaccaga
      121 cgaactccgc ggcgagttca gcatgcccgt ccacgtgtgc gatgtccgcc agtattgccc
      181 atgcgtaagg ggcggtgggg tgccaaccgt ttgccgctgg accttgtggt gggatggact
      241 tcgtctgacc atgtccggcc cgaaaccagg ccttaagcga ttttacttgc attgttctca
      301 ccaggtattc gacaaaggaa tccgtggcaa atccagcaac ttgtggcact ctacattgat
      361 taagatcaat acgcgactaa aaaatcacga tcccgtgatt tatttgccgt gccataaccc
      421 ggcggtcagc cccatccctg ctttgtgacc gacacgattt tccgcattca catgaaccgc
      481 cggcaggcgg ggctcgacgc aacgccgcga agcgttcagg atcatcggcc gcaagacacg
      541 gaggaatccc atgcttcgag acccgaaagt gatcgagcac ctgaacacac agctcactaa
      601 tgagctgacc gccatcaacc agtacttcct ccacgcccgc atcctccgcc actggggcgt
      661 caccaagctc ggcaagcagg aatacgacga gtcgatcgac gaaatgaagc atgcggacaa
      721 gttgatcgag cgcatcctgt tcctcgacgg cctgcccaat gtccagcgcc tgaaccaggt
      781 cgccgtgggc gaaacggtgg aggaaatcct caccgccgac ctgagcctcg aaaccaaggc
      841 gctcgacgac ctgcgggaag gcatcgccta ttgcgagagc gtgcgcgatt acgtgtcacg
      901 cgacctgctg ctccacatcc tggaaagcga ggaggaacat gtcgacttcc tcgaacgcca
      961 gttcgacctc atcaagcaga tcggcatcga gcgctacacc ctgctgaacg ccgcccccgc
     1021 cccggagcag gggcccggcg attgatagcg cgaggccgcc acccggcaga ggcacagatc
     1081 agaactgggg cgtatcgtca ggcagccgcc gccgcgtggc cggcccgcga taccgccggc
     1141 tggatcacgc cgtctcgaac aggcgctgcc caacatattc gccctgccgc acgccgccgg
     1201 ggatcgcgaa caacccgccg ccggtatgcg tcacgaactg gttcaacatg tcgaacttcg
     1261 ccattttctc gaacagtttg acgaaccctg tccgcggatc gatctgatag cacacgaaca
     1321 gcagcccggc atcgtactcc atcccctggc gccacggcgg ccaccgctcc gccgtgaagt
     1381 tcaccccgtc gttgtaggaa tagccccgcc gcaggatctc cgccgcccca ttggccgccg
     1441 cgttacccag gcgcacatgc gcgttttccg cgatcaccgg gttttcgtcg ccatcggttc
     1501 gatccagacc cagcggctcg aactcaccct tcaatcccag cggcgccccg gagtatttct
     1561 gccgcccgaa cgtctgctcc tggaacgaaa ccttggtgcg gtcccagtgc tccagcgcca
     1621 tccgaatccg ccgtgcgacc atgtaactgc cgccccgcat ccacgccggt ccatcctcgc
     1681 cgacccagac ggccttgccc acgtccggcg gcgactgcgt gccatccttg aagcccatca
     1741 agttccgcgt cgtcgcccca tcctccggcc gcgacatgaa cccggtctgg gtccagcgca
     1801 gatcaaccgc atcgtaagcc aaccgaccca actgccgcac cgcatggaac gccacctgcg
     1861 gatcgtcggc acaagcctgg atcgacaaat cgccgccggt cttctccgcc accaactgat
     1921 cgccgttgaa ccgaggcaaa tcgatcagcg catccggccg cgaccccgcc agcccatacc
     1981 gatccttgcc atccttcacg aacaaccccg gaccaaaccc gaacgtcagc gtcaaccgcg
     2041 ccgccggcag cccgagcgcg tcggcggaat ccggtcccgg aacatcctgg tccgtcccca
     2101 tcggttccgc cgtctgcccg gcggtcagcc gagccgccgc attcgtccac gtccgcaaca
     2161 acgcgatgac gtcgtcacgc ttctccgtgg tcaggtcgaa cgcggcgaaa tagcaatgcg
     2221 actgctgccg cgtcacgata ccggcctgat ggtcgcccca gaaagcctcc gtcgcggcag
     2281 ccggtctctc ggcggccggc gccccccgaa cgacgacccc agccgaggca accagtccgc
     2341 cggcagccgc cagcaggcct cggcgtgacg agcgcaaacc ggtcatcgtg actccatcac
     2401 cgtgttcatg tcgtcctcga cataatagaa cgccttgccg tcgggccgca tggcgatccc
     2461 gaacagatcg ccgttgcccg gcggcgactg cgcctggttg ttatcgatcc actgtgcata
     2521 aatctgcttg tgcgccaccg gatcgatctc caccacctgt ccgttccacg cattgcacga
     2581 cagcagatgc ccgttcggca ggatcatcag cgccagcggg tggctcagca gcccgtcctt
     2641 ggtgatcgcc tgacccgtgc cggcgctggt ggtccgcgtc gtcgcatccg caatcgcatc
     2701 gatccggttg tccaacgcat cggagacata cagcgtatta tccggcgcaa tcgccagccc
     2761 cgtcggcccc aacaagaacg acccccgatc cgctcgggca ctgaacccgc tgccgatgac
     2821 ggtcttgctc tggatcgccg gcggcttgcc gggcgggatg ctcaactcga tccgcagcac
     2881 ggtcgccttg cgcacgacga ccgggttgcc cgaggccgga tcgcgcacct gcggaccagg
     2941 caggtcgaaa cccgccatgc tgatgaacaa ggtcgcggtc gctccgttgt cgataaccgc
     3001 catgttcccc cagggcccgt tgatatccgg accggtccag gtatcgacca gcttgccgct
     3061 ggaatccagc accagcaggc agccgtcacc ccgggtacgc gtggtgccat cattgctggg
     3121 caggctgccc acgatcaccc aacccgtctt cagcatcgtc atcgccgtgg tcagcccgac
     3181 gccgccggga cattgcggca aattgtgcgg cagcttggcg aacagcgagg tctgcctggt
     3241 cgccgggttg taatcgacga tcgtcgtgcc cagcccctgc aaattcgaga tgttgttgaa
     3301 gttgtcgatc agcacgtcgt ccttgtggat cttcccggcc gaagccggcg ccaccacaag
     3361 cgcatacggg ttctggtcgc cattgtccgg cacggtggag gtcaacgtga tgtgcttctt
     3421 cacagtctcc aggaacccgc gcggcgtatc cgcccgagcc ggcagggcaa gcaccaccag
     3481 cgcggcggtc aacaacgagg ccacgcgccg gtgccggcgc tcgaagggca gggtcatgtg
     3541 aggcatccag gatgacggcg tgattagatg cgatttagtc gcattatcga aagcaggagc
     3601 cccggtcaag gccacggcgc gagcgatgat tgacatgtta ctctctcaga acaggatgtt
     3661 cgtgcgcacg cccagcacca gttcgttgcc gatgcggtgt ccaggattgt acggatcggc
     3721 cagcccgccg cccggcgtga acacatactg cgcgtccggc tggatctgca gccacggcgt
     3781 ggcctgatac tggtaggtcg cctcgatgta ggtctcgctg ccgcgcaccg ggatataggc
     3841 gccggtggcc gccgccgtcg cctggtccag cgccgagtcc gcaccgctca ccttcgcgaa
     3901 tcccagcccg agaccgaacg tgtcgttgtc gcgatgcagg aacggctcat gcaccgtgat
     3961 gccggcgttg gcgctgaacg tgatcaggtt gcgattggcc tgcggagcgc ccagcacgcg
     4021 ggcaaacacg ctcaccgtcc ggtcgccctc atgcggatcg acccagacca gttggtcggc
     4081 gacggcatag atgctgaaat cgccatgatg gttcagcgga atgccgttgc tcgccggact
     4141 gcccagcgac acgccgttga agtcgtaggc ctggtcggcg aaattctccg aatcatacca
     4201 gaagcccagc ttgtacaccc gcgacagcgg ctgcggcgca tcggcgctga tcatggaacc
     4261 cagggcaggg taggtgaact gcatctcccc gatcaccatc accccgttat gcaccggaaa
     4321 gctggtgccg gaccggttga ccacctgcgg atcgccgttg ttgttggcgg cggggctgcc
     4381 attgaacacg cccagcagga acgtcagcga gtcgatcggc cgatatcgca gccgcacgcc
     4441 cagcgccgac agcggatacg ccggcccgcc gccgggcaga tcggccgacg gcaccatcgg
     4501 ccagccgaac atcgtgttga tgaagtagcc ggcgttctgg ctgaccatga attcctggtc
     4561 caggctctgc tggccgatct tgatgtccat ccggtcttca tcaaggaatt tctgctggta
     4621 ccagagttcc cacagccggg tcgaacgatc cgactcgatg ccgctcgcgg tttgcagcga
     4681 ctgcagattg tccgaactca ggctgcggcc atggatctgc agcgcgctga tgttgaatgt
     4741 cccgccatgc cagccgaacg cccgctgggt gtccagttgc agcagcattt gcgtcaggcc
     4801 gtcgtaatcc gcacccttgt gggtgccgcc ggtgacgttg cccagcacct cactggtttc
     4861 ctggagcccg aacgagatgc cgtacttcgc cagttccgtc cgcagcccgc ccatatcgcc
     4921 cagcagcagg ctggtccggc ccagcctgtc gatcatcgaa ctgccggccc cgttctgatc
     4981 ggtttgcaaa tcttcatcgc tgggcacact caacgacgga ggtgccgcat gggccgcgtg
     5041 cagccaggcc ccgccgccca tccacgccga caccacggcg atcagccgca gcccggccat
     5101 cggggacaaa tgcgcccgcc tggcgatggg ctgatggtcg gtcgacctga tgtcgtgggg
     5161 catgctggct cgctcctgat tgcgtgatca gggtatgact aaattgagaa tgacttgcaa
     5221 tagcgatgca attgagaata actagcgact gggacgcagg acagcccaaa ccacggataa
     5281 cgcctataag aggatttcac cgatgcccga tgaccgttcg acatgctggc gggccgccac
     5341 caccagcctc gtcctggccg gcctgtgtct ctgcggaccc gccgtcgccg ccgatccggt
     5401 ccagatcaag atcaccctga aggaccacaa gttcgacccg gccgagatcc acgtcaaaac
     5461 cggccaaccc acgacgctcg tggtcaccaa ccaggatacc acccccgagg aattcgattc
     5521 gagcgcgcta caggtcgaaa aagtgatcgt cggcggccac tacggcgtta tcaagctcca
     5581 tccgctcggt cccggccgct tccccttcat gggggaattt catcccgaca ccgccaaggg
     5641 cgtcgtgatc tccgaatagc cgggtgccac ccgcttcgcg tctatatggc ggagtgggat
     5701 ggtatccagt ggacacaaag tcacccgaag tcacgcaacc tcgccacggg ccgagaccaa
     5761 tggctgatcc cgcggtgtgc caagcaccaa tccaacgcaa ctcgctcctg tagcgttgtc
     5821 tgttgcatcc cgttgtttcg cccgcgcgga catgctcgat ccgtgaatgc cgtcggcagg
     5881 aaagcaatca agaatgatgc ggaatttccc tgggttcgcg cggcggttcg cggagaggaa
     5941 atttcagccg gcagcatcca gtccagcagc gtccagtaac gtgattgcct ctggccggcc
     6001 gcgcggaatg cccgcgattg gcatcgagtc cgcaggtcaa attcaccagc acgcctccga
     6061 gaaactccgc gcaaactccg cgaaactccg cgatccgctt gattgctttc cgatccaccg
     6121 cggcgaagtg cggtggcgct cccaacagcc atcaacacag cggacacgga acgagtcgcg
     6181 acccgtggac cgaatcgaag ccaactgcgc tctactccgt cgtcaccgtg cgcgtgatgc
     6241 tgctgccggt tccgttccag gccaaccggc acgctccgcc ggcgaaatca aaacccctgc
     6301 ctggcgatat ccatcgcgaa ataggtcagg atcagatccg cccccgcgcg cttgatcgcc
     6361 cccaggctct cgcgtaccac ccggtgctca tccaccgcgc cggccagcgc ggcgaacttg
     6421 atcatcgcgt attcgccgct gacctggtac gccgccagcg gcaacaggct gcgctgccgg
     6481 acctgagaca gcacgtccag atacggcatc gccggcttca ccatcaggat gtccgcgccc
     6541 tccgcctcat cctgatcgga ctcccgcagc gcctcccgcc cgttcagcgg gttcatctga
     6601 tacgccttgc ggtcgccctg caggtcgcac ccggccgccg cccgaaatgg cccatagaac
     6661 gccgaggcaa acttcgacga atacgccatg atcggaatcc cgctgaaccc gttgccgtcc
     6721 agcgccgtcc ggatcgccgc cacctgccca tccatcatcg cagacggcgc gatcatgtcc
     6781 gccccggcct ccgccgcgac caccgactgc cggcccaaat tctcgatcgt gtg
//
LOCUS       DATAVD010001296         3860 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3473408, whole genome shotgun sequence.
ACCESSION   DATAVD010001296 DATAVD010000000
VERSION     DATAVD010001296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3860
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3473408"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            173..1048
                     /gene="hemF"
                     /locus_tag="VHX39_24650"
     CDS             173..1048
                     /gene="hemF"
                     /locus_tag="VHX39_24650"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HEX3994376.1"
                     /translation="MTLNPHETVTDTAHRALQEPARLWFEALRDRLCAAFEAIEHEIS
                     PNGGRFEQRAWTRDGGGGGVMSVMHGQVFEKVGVNVSTVWGEFSPEFRAQIPGAAEDP
                     RFWASGVSLVAHMRSPRVPAAHFNTRMLVTTEGWFGGGGDLTPMRLETAEAVADAADF
                     HAAFRAACDRHDPEYYPKFKEWCDRYFFLPHRNEPRGAGGIFFDRHRTADAAGDFAFV
                     RDVGEAFLAVFPAIVRRRMRETWTAAEREHQLVRRGRYVEFNLIHDRGTLFGLKTGGN
                     VEAILMSLPPEVKWP"
     gene            complement(1056..1538)
                     /locus_tag="VHX39_24655"
     CDS             complement(1056..1538)
                     /locus_tag="VHX39_24655"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3994377.1"
                     /translation="MESLPKPAGVIVADDDPLIRSVLKRKLEEFGQTVYQASNGAEAV
                     SLAECIDACLIILDIRMPRLDGVQACVQIRELPGYEHTPIVMLTFQDNKKAQTSASRA
                     GATMFLVKPFGTATLMLALSRFLPIDEATQKTIHADAVRATGGRVFVRPPSPDGRSRL
                     "
     gene            complement(1818..>3860)
                     /locus_tag="VHX39_24660"
     CDS             complement(1818..>3860)
                     /locus_tag="VHX39_24660"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3994378.1"
                     /translation="PMQPPEFMRVWRSGLEGTTQLVLPDGDHRILGFSPVPEFGWTIV
                     VGISAVQLTAPAWHAAMITSAVGLGLLLVGGALAQLISRSVIGPISKLARFASAAENG
                     DVPKPVGTGLRETDEVAAILLSDVRARDAAMATQARDAGALKRSNKALTDEIARREGA
                     QAALRAAKAVADEASHARSRFLTNITHELRTPLHGILGYAELLGLEGGLNPTQSARVA
                     SMIAAGEHLLGMINAVLDVSQIEAGRLELNPVEIDLADLAAACLDVVRPKAEAKGLAL
                     AMTVTTPGRVSADVTRLRQVLINLLGNAIKFTASGKVDLRLTRTAAGNGVRLEVVDTG
                     PGIWARHRDKLFRAFERLNAHAVEGIEGTGLGLALAAQFVRAMDGRIGYTDNPGGGSI
                     FWVELPAIPEGPAVPNVAVASNRDTSLGVRLLVVDDDALNREIASRFLTLGGHEVVCL
                     DNGFAAVEAAKTQGFDAILMDVRMPGMNGLEATRLIRMLPGPRGVVPVIALTAQAFAE
                     QIEICRAAGMNAHVSKPFSQETLLAAVAEMVPTRAAMAPVALPPNPTDGADPEHPVFE
                     RATFEEAIEFLAPAEAADYLRTLIARGEALACDLRADELRSGADALADAAHKFAGAAA
                     MLGFLSLADIGRRFEFAADSGAPEMQALADPLAAAVATALAIMQQKLGEMAVSAMD"
BASE COUNT          696 a         1225 c         1215 g          724 t
ORIGIN      
        1 acgcatgact gaccacggac cgcccggcct ggacggtccg ttcagagcga gcgcaagtta
       61 gaggcgcctt tcatcccccg caacaccgcc catggtgggt cctttgcgga tcagcccttg
      121 ggtcgcgtag cgttccgggc gtactctgac tggccgctgg gaacaagccc ctatgacact
      181 gaatccgcac gagactgtga ccgatactgc acaccgtgcc ttgcaggagc cggcgaggct
      241 ttggttcgag gctctgcgtg accggctgtg cgctgcattc gaggcgatcg agcacgagat
      301 cagcccaaat ggcggccggt tcgaacagcg cgcctggact cgcgacggcg gcggaggagg
      361 ggtcatgagc gtgatgcatg gccaggtctt cgaaaaagtg ggggtcaacg tttcaactgt
      421 ctggggcgag ttcagtcccg agtttcgcgc gcaaatccca ggtgccgcgg aggatcctcg
      481 gttctgggct tccggggtca gtctggttgc gcacatgcgt agcccgcgcg tgccggccgc
      541 gcatttcaac acccgcatgc tggtcaccac cgagggctgg ttcggcggcg gaggcgatct
      601 gacaccgatg cggctcgaaa cggctgaggc ggttgcggat gcggcagact ttcatgccgc
      661 gttccgtgcg gcgtgcgatc ggcacgatcc cgagtactac ccgaaattca aggaatggtg
      721 cgaccgctat ttcttcttgc cgcaccggaa cgagccacgc ggcgccggcg gcattttttt
      781 cgatcgtcac cgcacggcgg atgcggctgg ggattttgcg ttcgtgcgcg atgtgggtga
      841 ggcgtttctg gcggtgtttc cggcgatcgt gcgtcgcagg atgcgggaga cgtggacggc
      901 ggcggagcgc gaacaccagt tggtgcggcg tgggcggtac gtggagttca atttgatcca
      961 cgatcggggg acgttgttcg gattgaagac cggcgggaac gtcgaagcga ttctgatgag
     1021 tttgccgccg gaggttaagt ggccgtgatt tgccgttaca gcctcgatcg cccgtccggc
     1081 gacggaggcc gcacgaaaac ccgaccgcct gtggcgcgca ccgcgtcggc gtgaatcgtc
     1141 ttctgggtgg cctcgtcaat cggcagaaat cgcgacaacg cgagcatgag cgtcgctgtc
     1201 ccgaacggct tgaccagaaa catcgtagca cctgcccgag acgccgacgt ctgggctttc
     1261 ttattgtcct ggaatgttaa cataacgatt ggcgtgtgtt cataaccggg cagttcgcga
     1321 atctgcacgc acgcctgtac gccatccagc ctgggcatcc tgatatcgag tatgatcaga
     1381 caagcgtcga tgcattcggc aagcgatacc gcctccgctc cgttgctcgc ctgatagact
     1441 gtctggccaa actcttccag ttttcgtttc agaacgctgc ggattaatgg atcgtcgtcg
     1501 gcgacaatga cgccggccgg tttcggtaag ctttccatgg cagcctcgtg ttcagcactc
     1561 agggtcgtga cggcggacag ttttctcggt caggcagaat gcacagcctg ataatcagtg
     1621 gaccgtaaat cgcgacttcc cattcgtcat ccccgtgctt gtcacgggga cagtcgcggc
     1681 aaggcgctgg tgttgatccc cgcaacaagt ccggggatga cgattgagtg ggtcacgatt
     1741 caacgcttct ggatactaaa ctcaattgat gaatcgagga ttaacacgca ccgcatcgca
     1801 atcgacgaca gcgctcatca atccatcgca gagacggcca tctcgccaag tttttgctgc
     1861 atgatggcga gcgcggttgc aacggcagcg gccagtgggt ccgccagtgc ctgcatctcc
     1921 ggcgcaccgg aatcagcggc gaactcgaac cggcgtccga tatcggcgag cgacagaaat
     1981 ccaagcatgg ccgccgcacc ggcgaactta tgcgcagcgt cggccaaagc atccgcgccg
     2041 gagcgcagct catcagcgcg gagatcgcat gccagcgcct cgccgcgcgc gatcaaggtc
     2101 cgcaagtagt cggctgcctc cgccggcgcg aggaactcga tcgcttcctc gaatgtggcg
     2161 cgctcgaata ccggatgttc cgggtcagcg ccgtcggttg ggttgggtgg cagcgcaacc
     2221 ggtgccatgg cggccctggt cggaaccatc tcggcgaccg cggcaagcaa cgtttcctgg
     2281 ctgaacggct tcgagacatg cgcgttcata ccggctgcac ggcatatctc gatctgctcg
     2341 gcgaaggctt gcgcggtcaa cgcgatcact ggcaccacgc cacgcggacc gggaagcatg
     2401 cggatcaggc gtgtcgcctc aagtccgttc atgcccggca tccgcacgtc catcaggatc
     2461 gcatcaaaac cttgcgtttt tgctgcctcg accgcggcga agccattgtc caggcacacc
     2521 acttcgtggc cgccgagtgt caggaaccgg ctggcgattt cgcgattcag ggcatcgtca
     2581 tcgaccacca gcagccgaac gcccagtgaa gtgtcgcggt tcgacgccac ggcaacgttt
     2641 ggcacggcgg gaccctccgg gattgccggc agttccaccc agaaaatact gcccccgccc
     2701 gggttgtcgg tgtagccgat gcgcccgtcc atcgcgcgga cgaattgtgc tgccagggcc
     2761 aggccgagcc cggtaccttc gatgccctcg acagcgtggg cgttgagccg ctcgaacgca
     2821 cgaaacagtt tatcgcggtg cctcgcccag atccccggcc cggtatcgac gacctccagc
     2881 cgcaccccat tgcccgctgc ggtccgtgtc aggcgtaggt caaccttgcc ggaagccgtg
     2941 aacttgatgg cgttgccgag caaattgatc agcacctggc gcagccgcgt gacatccgca
     3001 gacacccggc ccggtgtcgt cacggtcatc gccagagcca gccctttggc ctcggccttc
     3061 gggcgaacga cgtcgaggca ggccgctgcc agatcggcaa ggtcgatttc gaccggattc
     3121 agttccaacc ggccggcctc tatctgcgac acatccagca cggcgttgat catgccgagc
     3181 aaatgctccc cggcggcgat catgctcgcc acgcgggcgg actgcgtcgg attgagccct
     3241 ccctccagac caagcagttc cgcgtagccg agaatgccat gcagcggcgt gcgcaattca
     3301 tgcgttatgt tggtcaggaa gcgcgacctg gcgtggctcg cctcatccgc gactgccttg
     3361 gccgcgcgca acgcggcctg ggcgccctcg cgcctggcta tctcgtcagt cagggccttg
     3421 ttactccgtt tcagcgcgcc ggcatcccgc gcctgagttg ccattgcggc gtcgcgcgct
     3481 cgcacatcgg aaagcaggat tgccgcgacc tcgtcggttt cccgcaggcc agtaccaacc
     3541 ggcttcggaa cgtccccgtt ctccgctgcg gatgcgaaac gggccagctt cgagattggt
     3601 ccgatcacgc tgcgggaaat caattgagcc agcgcgccgc caaccagcag caggccaagc
     3661 ccaaccgccg aggttatcat ggcagcgtgc cacgccggcg cggtcaactg cacagctgaa
     3721 attccgacca cgatggtcca gccaaactcc ggtactgggc tgaagcccag gatccgatgg
     3781 tcaccgtccg gcaggaccag ttgtgtggtg ccttccagcc ccgaccgcca gacccgcatg
     3841 aattcgggtg gttgcatcgg
//
LOCUS       DATAVD010001297         2550 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2546080, whole genome shotgun sequence.
ACCESSION   DATAVD010001297 DATAVD010000000
VERSION     DATAVD010001297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2550
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2546080"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(463..774)
                     /locus_tag="VHX39_24665"
     CDS             complement(463..774)
                     /locus_tag="VHX39_24665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994379.1"
                     /translation="MIGFYLEELGYQFDVVTDAAMSVEDLTKSHYECVLINLDQNSDQ
                     WRNSGLCLAERACSVHLPVVMIADHEVAAATISAKGWKSVRKPFTVAILESAIDEAVA
                     A"
     gene            1377..1811
                     /locus_tag="VHX39_24670"
     CDS             1377..1811
                     /locus_tag="VHX39_24670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994380.1"
                     /translation="MALGLAGRGSAATLDGTVAASGAGLSGYQVGVFVSAAGARGPIW
                     QRLGIDITDANGAFHIVYREPARGPGAIAPILFVEAERGQVLLAAALGTSGAAAARVT
                     VNERTTVATANAFAQFIAGAAIGGNPIGMANAVAMAGNLADG"
     gene            1830..2189
                     /locus_tag="VHX39_24675"
     CDS             1830..2189
                     /locus_tag="VHX39_24675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994381.1"
                     /translation="MLANSPNGSTTSTLPTFNALSNVALACVTRTAACAVLFTATTPS
                     GGTRPTNLLQALANLVKSPSFPGYPAPGEDPVFALSLLTPVHQPALPLRPTSWLIFLK
                     ITGVSPHPERPMRVSVR"
     gene            2233..>2550
                     /locus_tag="VHX39_24680"
     CDS             2233..>2550
                     /locus_tag="VHX39_24680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994382.1"
                     /translation="MTLPWGVAVDGNDTVWAFNFGAAPIGTLVPQSTGIAHLCGADTT
                     KCPAGLATGDAISPATGYRSDALMRLTGGEVDPSGNLSMADRSHRAARTGRRSSMSAP
                     TRPI"
BASE COUNT          520 a          809 c          728 g          493 t
ORIGIN      
        1 agaagttcga agcctaaatc aacaaacacc atgaaggcat cctacgatca acggactaac
       61 cttcagagca gccttccgtt cacaagcgat ccgtctctgt cctccagtac ctcggtcagt
      121 cttcttacct tctcattatg aatgtagcgt cgcggatcga tttcatcacc ccctgagaca
      181 aacccaatga aatggtcccg ccatcgaaag cccaacatga agcattcccg agtggcgttg
      241 ggaaaccaaa tcaccactct tcgacggagc cagaaacgct ccatcctgag cattggcaaa
      301 tctccaaaat tattttgcga gagcatatca cactaataaa ccacattctt aagccaaatc
      361 atcgatcaat acaaaataca acctactttg ccgccaaagc tacaatttac cctttaaggt
      421 tgcattctga acgccaatac tttgctatga tgctccctgc gatcaggcag ccacggcctc
      481 gtcaatcgcc gattccaata tcgcgaccgt gaatggcttc cgaaccgact tccagccctt
      541 cgctgaaatc gtcgcggcgg caacttcatg atccgcgatc atcaccactg gcaagtgaac
      601 gctgcatgca cgctcggcca ggcagagacc tgaattacgc cattgatcgc tgttctgatc
      661 gagatttatc aagacgcatt catagtgact tttcgttaga tcctcgacgc tcatggccgc
      721 gtcagtaaca acgtcgaact ggtatcccag ttcctccagg tagaagccaa tcatgtctgc
      781 gaggtccacg tatggctcga tcagcagtat tcgtttgccc ataggtcgtc tcccagctcg
      841 cacggatgta aacgcggaga gagcgacttc gttgcatgtt aggcagggaa cgcggttcgg
      901 ccacgccgca cggcgacctc ggggatgatc ctcatagccc tcccgtaggt atcgcattcg
      961 gccagcacaa cgcggcgagg aattccaccg caggattcgc catcaagcct ccggtgacag
     1021 cgatggtcgc tcgcccgagt gcgcaggcat ggaagatcgc ctcagcctga gttcagggag
     1081 agttcgatcg tttcggaaac catcagctca gcggctccga caggttgtag cctcgaccgg
     1141 ccgggaaacg gtgaacaacg ttatcgtaca gtctgcacaa ccgtgccgcg acccagagcg
     1201 gaaatgggag gatgcaaacg ctgatgtggc tcaggccggc accgtgcttg acaacgcgcg
     1261 cgaaacgaaa ccctgctgtc gtcaattctt aaatcgccgc gaagcgggca gccttggggg
     1321 catggatgag gaacggcgat tgcacggcgt agcgtgggct ggcgcttgtg gcactcatgg
     1381 ctctcgggct tgcagggcgc ggctcggccg ctacgctgga tggcacagtt gcggccagcg
     1441 gagcagggct ctccggctat caggtcgggg tcttcgtcag cgccgctggt gcccgcggcc
     1501 cgatctggca acgcctcggc atcgacataa ccgacgccaa cggtgcgttc catatcgttt
     1561 accgtgagcc tgcgcgcggc ccaggtgcaa tcgcgccgat attgttcgta gaagcggaac
     1621 gcggccaggt gctgttggcc gctgcactgg ggacaagcgg tgccgctgcg gcgagggtta
     1681 cggtgaacga gcgcaccacg gtcgccaccg ccaacgcgtt cgcccagttt attgccggtg
     1741 ccgccattgg gggcaacccg atcgggatgg caaacgcggt ggccatggcc ggcaacctcg
     1801 cggatgggta aaccggtgca ctcgacgaag tgctggcaaa ttcgccgaac ggttccacga
     1861 cctccacgct cccgaccttc aacgcgctga gcaacgtggc gctggcctgc gtcaccagaa
     1921 ctgcggcctg cgccgtgctg tttacggcca caaccccgtc gggcgggacg cggccgacca
     1981 atcttctcca ggccttggcc aatctggtga agtcgccgtc cttccccggc tacccggcgc
     2041 cgggcgaaga tccggtgttc gcgttgtcgc tgctgacacc ggtccaccag cctgcgctgc
     2101 cgttgcggcc tacaagttgg ctgatcttcc tcaagatcac cggcgtttcg ccacacccag
     2161 agcgtccgat gcgcgtgtcc gtgcggtgat gtcggcaaag gttatgacga cgccccgttt
     2221 accggcgggg gtttgacgct gccgtggggg gtcgcagtcg atggcaacga cacggtgtgg
     2281 gcgttcaatt tcggcgccgc cccgattggc acgctggtgc cacagtcgac cggaatcgcg
     2341 catttgtgcg gcgccgacac cacgaagtgt ccggctgggc tggccaccgg cgatgcgatc
     2401 tccccggcca ccggatatcg cagcgacgcc ctcatgcgcc tcaccggcgg cgaggtggac
     2461 ccttccggca acctgtcgat ggccgaccgc tcccaccggg cagcgcgcac tggtcgaagg
     2521 tcgtccatgt ccgcaccgac ccgaccaatc
//
LOCUS       DATAVD010001298         2052 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1798669, whole genome shotgun sequence.
ACCESSION   DATAVD010001298 DATAVD010000000
VERSION     DATAVD010001298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1798669"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            196..969
                     /locus_tag="VHX39_24685"
     CDS             196..969
                     /locus_tag="VHX39_24685"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3994383.1"
                     /translation="MRLANKTAFITGGNSGIGLATAKLFAAEGAKVIITGRNKATLEV
                     AGRELGPNALAIAADTTDIAATEAAIKKGVEKFGKLDVVFANAGIAGGTPLGSATLEI
                     FENVLRTNVTAVFFTVQAAVPYLNDGASIILNGSVISVLGNPGYAAYAASKAGVRAMA
                     RVMASELSPRNIRVNVVAPGAIRTPIWGAALATPEAEKSFEKRIGATTPLGRIGEPDH
                     VSKTVLFLASDDSAHVQGQEIFIDGGSTASPAGAPIYRG"
     gene            complement(1056..1664)
                     /locus_tag="VHX39_24690"
     CDS             complement(1056..1664)
                     /locus_tag="VHX39_24690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HEX3994384.1"
                     /translation="MKLLHIDSSVLGPHSVSRQVSAAIVDRLRQATPGLDIVYRDLTS
                     TPLAHLSGHHLAAAQGAVPEAALLPDIVASQAVLEEFLAADIVVLGAPMYNFTIPSQL
                     KAWIDRILVAGKTFKYSAQGVEGLAGNKRVIIAVSRGGFYGAGTPMAALEHLETYLRG
                     VFGFIGVKNLEFIAADGVQIGPEHREKALAGALQAATGLHAA"
     gene            1761..>2052
                     /locus_tag="VHX39_24695"
     CDS             1761..>2052
                     /locus_tag="VHX39_24695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011252433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3994385.1"
                     /translation="MKPEHTRVPVLPPNAHLDSDCRGVASVLARVGDKWSVLVIMLLG
                     GGPRRFNELKRMIGGISQRMLTLTLRGLERDGLVTRTVFPTIPPRVDYELTEL"
BASE COUNT          388 a          630 c          657 g          377 t
ORIGIN      
        1 cgaccaccag tcgccgatct cgtcgagcga tcgcgcgatc ggacatccgt cgcctgcaaa
       61 gcttttgcgt ttcaccgtga cctcctcgcg accgttgtcc ccgatgccgc cgatcacccc
      121 gttatgtagt tgcgttatta aaccagatac cctagatagc aacatagttt aataatgcaa
      181 ccactggaga cgatcatgcg tttggcaaac aagacggcgt tcattaccgg gggcaacagc
      241 ggcatcgggc tggcgacggc gaaactgttc gcggccgagg gcgccaaggt catcatcacc
      301 gggcggaata aagcgacgct ggaggtggcg ggcagggaac tgggaccgaa cgcgctggcg
      361 attgcggcgg acaccaccga catcgccgcc accgaagccg ccatcaagaa gggcgtcgaa
      421 aaattcggca agctcgacgt ggtgttcgcc aatgcaggca ttgccggcgg cacgccgctc
      481 ggcagtgcga cgctggaaat ctttgaaaac gtgcttcgga ccaacgtgac cgcggtgttc
      541 tttaccgtac aggccgcggt tccgtatctg aacgatggcg cttccatcat cttgaacggc
      601 tcggtgatct cggtgctcgg caatcccggt tatgccgcct atgcggccag caaggccggc
      661 gtgcgcgcga tggcacgggt gatggcgtcg gaactgtcgc cgcgtaacat ccgtgtcaat
      721 gtggtcgcgc ccggtgcgat ccgtaccccg atctggggtg ctgcgctggc gacgccggag
      781 gccgagaaat cctttgaaaa aaggatcggc gccaccacgc cgctcggccg gatcggtgaa
      841 ccggatcacg tctccaagac ggtgctgttc ctggcgtcgg atgattccgc gcatgtgcag
      901 ggccaggaaa tcttcatcga tggcggctcg acggcgtctc cggccggcgc cccgatctat
      961 cgcggttagg gatcagttcg aaattcgtca tgcccggaca aaggcgcgcc gttgcgccag
     1021 acgtccgggc atgaccgttt ttcgccgctc tttaattagg ccgcatgcag acccgtggcg
     1081 gcctgcaggg cgccggccag tgccttctcg cggtgttccg gtccgatctg gacgccatcg
     1141 gcggcgatga actcgaggtt cttgacgccg atgaaaccga acacgccgcg cagataggtt
     1201 tcgagatgct ccaaagcggc catcggcgtg ccggcgccgt agaaaccacc gcgcgacacc
     1261 gcgatgatga cgcgcttgtt gccggccagg ccctcgacgc cctgtgcgct gtatttaaaa
     1321 gtcttgcccg ccaccaggat gcggtcgatc caggccttga gctggctcgg aatggtgaaa
     1381 ttgtacatcg gcgcgccgag taccacgatg tcggcggcga gaaattcttc cagcacggcc
     1441 tggctggcga cgatgtccgg cagcagggcg gcttcgggga ccgcgccctg ggccgccgcc
     1501 agatggtggc cggacagatg cgccagcggc gtcgaggtga ggtcgcgata gacgatatcg
     1561 agacctggcg tcgcctgacg cagacggtcg acgatggcgg cggaaacctg acggctgacg
     1621 gagtgcgggc cgagaacgct ggaatcgatg tgcaggagtt tcatttgggt cacccttggt
     1681 ataagtttgt aactggcgct atatgagtga ctgtcctaaa accccgcaag aacgcacatt
     1741 tttgaaaccc gggcacatcc ttgaaacctg agcacaccag agttcccgtc ctgccgccca
     1801 acgcccacct cgacagcgat tgtcgcgggg tcgcctcggt gctggcgcgg gtcggcgaca
     1861 aatggagcgt gctggtcatc atgctgctcg gcggtggacc gcgccgcttc aacgaactca
     1921 agcgcatgat cggcggcatc tcgcagcgga tgctgaccct gaccttgcgc ggcctcgagc
     1981 gcgacggcct ggtgacgcgc accgtgtttc ccaccatacc gccgcgggtc gattacgaac
     2041 tgaccgagtt gg
//
LOCUS       DATAVD010001299         2831 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1798923, whole genome shotgun sequence.
ACCESSION   DATAVD010001299 DATAVD010000000
VERSION     DATAVD010001299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2831
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1798923"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..1156)
                     /locus_tag="VHX39_24700"
     CDS             complement(110..1156)
                     /locus_tag="VHX39_24700"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3994386.1"
                     /translation="MRSADPVPRIETFASLDALPDDVGPLFAAAGSFFATRAWWEAVL
                     SHAIPPNARPRLVLIRHLGLPWGLFPMLYDPAGAGFGALTTPYTCLYEPLIAFDRAEL
                     FAAFARYCRSFPTTRLDALDPSAATQFAAGAKRAGLFAARFDHFGNWYEDVSGLDWDG
                     WLARRPGALRETIRRRTRRAEQIPAVRFRLFDQQNDLAGGIDAFETVYARSWKDPEPY
                     PAFNPAQIRAAASLGVARVGVWWIGETPAAAQFWIVEQGRATVLKLAHDESFKEHSPG
                     TVLTAWMIRHMIEQAHVSELDFGRGDDPYKRDWVGFSRQRMGVLLINPRHPLGLLALA
                     RHAVGRVTARLRNG"
     gene            complement(1143..1877)
                     /locus_tag="VHX39_24705"
     CDS             complement(1143..1877)
                     /locus_tag="VHX39_24705"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEX3994387.1"
                     /translation="MLKSILIAMLLPPVCFLYCVILGLLMVRRFHRGGRALVGIGLVG
                     LALLSIPLVPNLLLVALEQNLPTTPPPDAMPQAIVILGGDLLRTAQPPHSLPGFLTLD
                     RLREGAALYRKTRLPILVTGGTVQPDHPPVAVVMADSLRNDFQVPVTWVEASSIDTWQ
                     NAEFTAEMLKPRGIRSVYVVTQGWHMRRAMLAFHHAGLIATAVPTSIDRPFDSILWNL
                     PPRASAWQLSYYALHEWIGIAWYAIR"
     gene            complement(1871..>2831)
                     /locus_tag="VHX39_24710"
     CDS             complement(1871..>2831)
                     /locus_tag="VHX39_24710"
                     /inference="COORDINATES: protein motif:HMM:NF014740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX3994388.1"
                     /translation="PGAATARMSLYLVTGGAGFIGSHLCDALIARGDTVRVLDDFSTG
                     HRANLPTGIELIVGDIADAPTVLRATEHVDGCFHLAAIASVERGINDWLGTHRTNLTG
                     TIAVFDSIRQHGTRIPIVYASSAAVYGNCHTIPIRETADRRPLSAYGADKYGCELHAI
                     TATHVHGIPTVGLRFFNIYGPRQNPRSPYSGVISIFCERIRNAEPILIRGDGAQTRDF
                     VHVSDAVAALLAAMRLTPDEASIFNVCTGAATSILELAQFIGSLAGKRPNVIHIPVMP
                     GDIRHSLGDQTSMRKVLNLSRTVPLRDGLLTLLTHAAEQSAQC"
BASE COUNT          608 a          888 c          866 g          469 t
ORIGIN      
        1 gctggtcagg tcgagcacca acaaatgttg caaagcacct ggcatcgctc ggtctcctgt
       61 tcgtacgaca caacatcatg ccatgcgcgg ccggtagagc gaagccagct caaccattcc
      121 gcaatctcgc cgtgaccctc cccaccgcat ggcgcgccag cgccagcaag cccagaggat
      181 gccgcgggtt gatcagcagc acgcccatcc gctgacggct gaagccgacc cagtcccgtt
      241 tgtaaggatc atcgccgcgc ccaaaatcca actccgacac gtgcgcctgt tcgatcatgt
      301 ggcggatcat ccaggccgtc agcacggtac ctggcgagtg ttccttgaaa ctctcatcgt
      361 gtgccagttt caggacggtc gcccggccct gttcgacgat ccagaactgc gcggcggcgg
      421 gcgtttcacc gatccaccaa accccgaccc gcgccacacc caaggacgcg gcggcacgga
      481 tctgcgcggg attgaatgcc ggatatggct ccgggtcctt ccagctccgt gcgtacacgg
      541 tttcgaacgc gtcaattccg cctgcaagat cattttgctg atcgaataac ctgaagcgaa
      601 ccgcaggaat ttgctccgcc cgtctggtgc gtcgccggat cgtctcacgc aacgctcctg
      661 ggcggcgagc caaccagcca tcccaatcga gaccggaaac atcctcatac cagtttccga
      721 aatgatcgaa ccgggctgcg aagaggccgg cccgcttcgc gccagcagcg aactgcgtcg
      781 cggccgaggg atcaagagca tccagccgcg tcgtgggaaa cgaccggcaa tatcgcgcga
      841 aggcggcgaa aagttctgca cggtcaaagg caatcagtgg ttcgtaaaga caggtatatg
      901 gtgtggtcaa cgcgccaaat ccggcaccgg ccgggtcata cagcatgggg aacagacccc
      961 acggcaaccc cagatggcgg atcagcacaa ggcgcggcct ggcgttgggc gggatcgcgt
     1021 ggctgagtac ggcttcccac caggcgcggg tcgcaaagaa actcccggca gccgcaaaca
     1081 atggcccaac gtcatctggc agggcgtcca ggctggcaaa cgtttcgatc cgcggaaccg
     1141 ggtcagcgga tcgcatacca cgcaataccg atccactcat gcagcgcgta ataactcaat
     1201 tgccaggctg acgcgcgagg cgggagattc cacaggatcg agtcgaacgg cctatcgatt
     1261 gacgtgggca ctgcggtcgc aatcaggccc gcatggtgaa atgccaacat ggcgcgccgc
     1321 atgtgccagc cctgcgtcac gacatagacc gagcggatgc ctcgcggctt cagcatctcg
     1381 gcagtaaact ccgcgttttg ccaggtgtcg attgaagaag cctcgaccca ggtaaccggc
     1441 acctggaagt cgttgcgaag actgtcggcc atgaccaccg caaccggcgg gtggtccggt
     1501 tgcacagttc cgccggtcac caggatcggc aacctggtct tgcggtataa agccgctcct
     1561 tcgcgcagcc gatccagcgt cagaaatccc ggcagcgagt gcggcggctg cgcggtgcgc
     1621 agcaaatcgc cccccagtat gacgatcgcc tggggcatgg cgtcaggtgg cggcgtggtc
     1681 ggcaggttct gctccagcgc cacgagcagc aggttgggaa ccaacgggat cgaaagcaac
     1741 gcaaggccca ccagaccgat gccaaccaga gcgcgcccgc cacggtggaa ccgccggacc
     1801 atcagcagcc cgagaatgac gcaatacagg aagcaaaccg gtggcagcag catcgcaatc
     1861 aaaattgact tcagcactgt gccgattgtt ccgcggcatg ggtgagcaaa gttaacaggc
     1921 cgtcgcgcag agggaccgtc cggctcagat ttaatacttt gcgcatgctc gtctggtcac
     1981 ccagtgaatg gcggatgtct ccaggcataa ccgggatgtg aatcacgttc ggacgcttcc
     2041 cggccaggct cccaatgaac tgcgccaact ccaggatcga tgttgccgca cccgtgcaaa
     2101 cattgaagat cgacgcctcg tcaggcgtca gtcgcatggc ggccagcaaa gcggcgacgg
     2161 catcgctgac atggacaaaa tcgcgggttt gcgcgccgtc gccgcggatc aggatcggtt
     2221 ctgcattgcg aatgcgctcg cagaagatcg agatcacccc tgaataaggt gaccgtgggt
     2281 tctgccgggg accgtagata ttgaaaaagc gcaaccccac ggtcggaatg ccatgaacat
     2341 gggtcgcggt gatcgcgtgc agttcgcagc catacttgtc ggcgccgtag gcggacagcg
     2401 gtcgccgatc tgcggtttcg cggatcggaa tggtgtggca attgccatac accgccgcag
     2461 aggacgcgta gacgatcggg atccgggtcc cgtgttgccg gatcgaatcg aatacggcga
     2521 ttgtgccggt cagattggtg cgatgcgtgc caagccagtc gttgatccca cgctcgacgg
     2581 atgcgatggc agcgaggtga aagcatccgt cgacatgctc ggtggcccgc agcaccgtcg
     2641 gcgcatcggc gatatccccc acaatcagct cgatgccggt gggcaggttg gcgcgatgcc
     2701 cggtggagaa atcatccagc acccgcacgg tgtcgccgcg tgcgatcaaa gcatcgcaca
     2761 aatgcgaccc gatgaaacct gcgccaccgg tgacgaggta cagactcatg cgtgcggtcg
     2821 cagcacctgg c
//
LOCUS       DATAVD010001300         1768 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_309868, whole genome shotgun sequence.
ACCESSION   DATAVD010001300 DATAVD010000000
VERSION     DATAVD010001300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309868"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            293..1174
                     /locus_tag="VHX39_24715"
     CDS             293..1174
                     /locus_tag="VHX39_24715"
                     /inference="COORDINATES: protein motif:HMM:NF045433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994389.1"
                     /translation="MSHWPRRTPAGETVTRGIKSILAVTRRNRTHPRGFALVIVLWSL
                     GLLALLGTQLTSTSRAQLRLATAARDRAQAEAAADGAIRQAVFILLGGGQPGSPRQPL
                     QVRIGTAMVGISAEDQSTKINPNAVPAETLRALLVAVGVDQPRAARLAAEISDWRKRS
                     QNSALGGMKLDQYLEHGLPYRSGDHPFTSVDEIALVPDMTPAILGRLRPWLSVYQEGE
                     TRDPDDASPVGSAIVNARVATRQSPAPEFVSHNRIMRVTARAITSSGAQFVRTAVVRI
                     REESGDDGLVFQILAWE"
     gene            complement(1278..1511)
                     /locus_tag="VHX39_24720"
     CDS             complement(1278..1511)
                     /locus_tag="VHX39_24720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006817000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CstA-like transporter-associated
                     (seleno)protein"
                     /protein_id="HEX3994390.1"
                     /translation="MTEILATTEAVRRRTRLVCDMVVQTARLMVGVPDYDTYVAHRRS
                     MHPDQPVMTYQEFFRERQEARYAVGKGRFRGCC"
     gene            complement(1504..>1768)
                     /locus_tag="VHX39_24725"
     CDS             complement(1504..>1768)
                     /locus_tag="VHX39_24725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HEX3994391.1"
                     /translation="AVGFVSHALKFGAAAAAGHVLAPAKTLHEMGRIVFNDYLDASLA
                     GLFAAIVLTMVVYGVLDARKALRTPRNTTAEIGPLSALVAGND"
BASE COUNT          342 a          535 c          552 g          339 t
ORIGIN      
        1 ccgttgctac catccccatc gctgcactgt tcgtgttttt ccagcgctat ttcattaaag
       61 gcctgaccga agctgcggcg aaaggatgct ggcgcgggaa gacagcccgt ggaacccgaa
      121 gatgcgtatc ctccggcagc ctgtccttgg cgactggcaa actgtaactg gcagaatgtt
      181 ttgactgcgg gtactaagtg atcgacaaca tcgcgaccgt ggatgcaaaa gcggcgtaat
      241 ggtcgtggcc cggtcaggcc gaggggccgt atcacgacgg tgaaatgcca gcatgagtca
      301 ttggccacgg cgaaccccag caggcgagac tgtcacgcgc gggatcaaat cgatcctggc
      361 ggtgacacgc cgtaaccgaa cgcacccgcg cggctttgca ttggtgatcg tgctctggtc
      421 gttgggattg ctggcgctgc tgggaaccca gttgacctcg acctcgcgcg cgcaattacg
      481 cctggcgacg gcggcacgcg accgcgcaca ggccgaggcg gccgctgatg gggcgatccg
      541 ccaggcagtc tttatcttgc ttggcggcgg ccagccgggc tcaccgcgtc aaccattgca
      601 ggttcgcatc ggcacagcaa tggtcggcat ctcggccgag gatcagtcga ccaaaatcaa
      661 ccccaacgcg gtgccggccg agacactgcg ggcattactg gtcgcggttg gggtggacca
      721 gccacgtgcc gcacggctgg ccgccgagat cagcgattgg cgaaaacgca gtcaaaattc
      781 cgcacttggc ggtatgaagc ttgatcaata tctcgagcac ggcctgccgt atcgctcggg
      841 cgatcacccg tttacgtcgg tggacgaaat cgctctcgtt ccagatatga caccagcaat
      901 tctcggccgg ctgcggccat ggctgtcggt gtatcaggag ggtgagacgc gtgatcccga
      961 cgacgcttcg ccagtcgggt cggcgattgt caatgcgcgc gttgctacgc gtcagtcgcc
     1021 ggctccggaa ttcgtcagcc ataatcggat tatgcgtgtg acagcgcggg caatcaccag
     1081 cagcggcgct cagttcgttc gcactgcggt ggtgcggatt cgtgaggagt ccggtgacga
     1141 cggcctggta ttccagatac tggcgtggga atgattgttc gcaattgaca cgcagacagt
     1201 tccgacggac tgctcgccat tcgctatatg caacgtttcc gcgctgagta ctgcggcagg
     1261 caccttcgcc acagcagtca acagcagccg cggaatcggc ctttgccgac cgcgtagcgt
     1321 gcttcctgac gctcacgaaa gaactcctga tacgtcatga ccggctgatc cggatgcatc
     1381 gaccgccgat gggccacgta tgtatcgtaa tcggggacgc caaccatcag ccgggcggtt
     1441 tgcacgacca tgtcacacac caaacgggtc cgccgtctga ctgcctcggt cgttgccagg
     1501 atctcagtca ttgccggcca ccaatgcgct cagcggtccg atctcggctg tggtgttgcg
     1561 cggggtgcgc aatgctttgc gtgcgtcgag gacgccgtag accaccatgg tcaaaacgat
     1621 cgccgcgaac agaccggcca aactggcatc gaggtagtcg ttgaacacga tccgccccat
     1681 ttcgtgcaag gttttggctg gtgccaggac atgaccggca gcggcggccg ctccgaactt
     1741 cagcgcatgg ctgacaaagc cgaccgcg
//
LOCUS       DATAVD010001301         6278 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1424618, whole genome shotgun sequence.
ACCESSION   DATAVD010001301 DATAVD010000000
VERSION     DATAVD010001301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6278
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1424618"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            412..4803
                     /locus_tag="VHX39_24730"
     CDS             412..4803
                     /locus_tag="VHX39_24730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEX3994392.1"
                     /translation="MPDSQPDRAKSGRRPLTRDPPPGIADFPIVGIGASAGGLDACRK
                     FLAALPANNGMAFILVQHLDPTHESMMVELLAGFTPMTVLQAMEGMPVERDHLYIIPP
                     GTYLSVIGGALRLSQPQARHGARLPFDFLLHSLAADRGTWALCVVLSGTGTDGSIGLQ
                     AIRAKGGFVVAQDPDEAEYGGMPRNAISTGDVNLVLPVERIPEALARRDHQHADAPWR
                     NGILDQDTVSEWLPAIIDLLRAKTAHDFTLYKPGTLQRRIERRMVMAAVDIQDSDRYI
                     KILRSDPNELNLLAKDLLINVTSFFRDPPVFDMLAKKTIPDLVRSHAPDKPMRIWIAG
                     CSTGEETYSLAMLFREEISAANLGIKLQVFASDVDPDAIATARDGLYPASIEVDVTAE
                     RIARFFSKEDQSYRVSPELRSAVVFTVQDVLADPPFSRLDFVSCRNLLIYLRPEAQAK
                     VLALFHFALSEGGILLLGTSETTGADDGKFGVISKHNRIYRHIGRSRPGEFGFIRGPG
                     DGVRMPARPGHSAPPSRQAVLAELCRRMVMETYAPAAVLINRKHECLFSVGPTDRFLR
                     VVPGHPSHDLLAMARQGVRTKLRSAIQRATQENVPIVIPGGRISEDSPAGTFSIAVQP
                     FRNDGEDLLLICFVNDPKAKLVRDKSGASRDGPRVVELEHELDATRTELQGAIHNLEI
                     SGEEQKAINEEAWSVQEEYQSTNEELLTSKEELQSLNEELTALNSQLQETLERQRTTS
                     NDLQNVLYSTDVATLFLDKGLNIRFFTPATKALFSILPGDIGRPLSDLNSLAEDGNLL
                     ADAQLVLRTLQPTEREIETCTSSCFIRRILPYRTQNDGVEGVVITFADITERRHAADE
                     LGVAKRQADLANAAKSRFLAAASHDLRQPLQTLALVQGLLAKNVESEKARKLVSRLDE
                     TLGAMSGMLNTLLDINQIEAGTVHAEIMDFPIDGLLGQMREEFTYHAQAKGLTLRVVP
                     CGLLVRSDPRLLEQMIRNLLSNALKYTKRGKILLGCRRHKGTLSLQIWDTGIGIPDTE
                     LQSIFEEYYQLDNAARERSRGLGLGLSIVHRLGVLLGHTVQVRSRPGRGSVFSVEIKL
                     ARNGRASRPAEVALGLSSKGNEADHHVGSILVVEDDPDVRELLEVFLRDEGHEVTSAH
                     DGIRACELVTGGLVRPDLILSDYNLPNGMNGTAVAKLLRDALQHPVPTIILTGDISTG
                     TLSSVALQDCVQLNKPVKLRELTQAIQRMLPLSRTAVQVRAPRPAEVPGDGGPPVIFV
                     VDDDDGIRGAMRAVLEDDDRVVEDYDTCEAFLAAFRPGREACLVIDAYLPGMNGLTLL
                     RRLREAGHRLPAIMITGNSDVAIAVQAMKAGASDFIEKPISRGELLGCVDRALEQSRD
                     SGKRTAWQADAATHMAGLTPRQHQVMEMVLAGHPSKNIAADLGISQRTVENHRASIMT
                     KTGTKSLPALARLALAAAVNDADEPAS"
     gene            5132..5827
                     /locus_tag="VHX39_24735"
     CDS             5132..5827
                     /locus_tag="VHX39_24735"
                     /inference="COORDINATES: protein motif:HMM:NF033587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
                     /protein_id="HEX3994393.1"
                     /translation="MNRTQYPSDVIALVVLWRLRYKLALRDLPEMFLIRGIVFSHEAV
                     RDWEAKLTPALAESLRRRRRGKAGRSWYVDETYIKVHGHWRYLYRAIDRSGTLVDVMF
                     SEHRDMAAAKAFFESAKMVTGVTPARVTTDGHDSYPRAIRTVLGTGVRHRDNQYLNNR
                     LEQDHRGVKGRYGPMRGFKCPRSAGRFCRAYDELRNFLRSRSRTNQKVSADYRRFHFL
                     RRTATVLSVLEAA"
     gene            6006..6269
                     /locus_tag="VHX39_24740"
     CDS             6006..6269
                     /locus_tag="VHX39_24740"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEX3994394.1"
                     /translation="MKLSNTDQHYGAAAIALHWLMAIFIVSLVAMGIYMVRLPDVGFN
                     IKKIILILAHKEIGVLVLTLAGARLAWRLLNPLPGLVNTVPEW"
BASE COUNT         1244 a         1890 c         1937 g         1207 t
ORIGIN      
        1 cagttcgtcg caacctgctg aattgactcg atcaatgcag ccgacccgat taggttgttt
       61 ccttccgggc cctaagtcct tttcaacgca tgcctgtcca aacgattgcc acgtctggac
      121 atcgtcggca cctctattca gccgacggcg tcgctccgcc gactcggctt gccgtgatcg
      181 gttctccaaa agcattgagc tctccaagga ttttcacggc acttggccaa tcggtagcgt
      241 cacaccagag cctttagtcg atgaccggcc ggtcgatata gcctcggaaa gtactcatag
      301 ccggcaccgc gccagaatcg tatagacaag gttcgccgtg acatcgagag tatgttacgg
      361 tacgtctttc ggctttcaag cggctgcggg aacacacgaa agctagcaat catgccagac
      421 agccagccag accgggctaa atcgggccgt cgccccctca cccgcgatcc gcctcctggc
      481 atcgctgatt tcccaatcgt cgggattggc gcctcggcgg gtgggctcga cgcatgccgg
      541 aaatttctcg ccgcgttgcc agccaataac gggatggcct tcatcctagt acagcatctc
      601 gatccaacgc acgaaagcat gatggtggag ctgctggccg gcttcacacc gatgacggtt
      661 ctgcaggcga tggaaggaat gccggtcgaa cgcgaccacc tctacatcat cccgccggga
      721 acctatttgt cagtcatcgg cggcgcgctg cgcctctcac agccgcaggc gcgccatggt
      781 gcgcgacttc catttgactt tctactccac tcattggccg ccgaccgcgg cacatgggcg
      841 ctgtgtgtgg tcctgtcggg caccgggacc gatggcagca ttggcttgca agccataagg
      901 gcaaaaggcg gcttcgtcgt cgcgcaggac cccgacgaag ccgagtatgg cggaatgccg
      961 cgaaacgcca tctcaaccgg tgacgttaac cttgttttgc cggtggaacg cattccggag
     1021 gcgctcgcac ggcgcgacca ccaacatgcc gacgcaccct ggcggaacgg gatactcgac
     1081 caggacaccg tcagcgagtg gctgccggcg atcatcgatc ttctccgagc aaagacagcc
     1141 cacgatttca cgctttacaa gcccggcacg ctacagcgcc ggatcgagcg gcgcatggtg
     1201 atggccgcgg tcgatatcca ggattcggat cgttacataa agatcctgcg aagcgacccg
     1261 aacgaactca acctgcttgc caaggacctg cttatcaacg tcaccagttt cttccgtgat
     1321 ccaccggtct tcgatatgct ggcaaagaag accattccgg atctggtgcg cagccacgca
     1381 cccgacaaac cgatgcggat ttggatcgcc ggatgcagca cgggcgaaga aacgtactct
     1441 ctcgccatgc tgttccgcga agaaatttcc gccgccaatc tgggcatcaa gctccaggtc
     1501 ttcgcctccg acgtcgaccc ggacgccatc gccactgctc gggatggcct gtatcccgcc
     1561 agcatcgaag tggatgtcac cgccgaacgg atcgcacgct ttttttcgaa agaagaccag
     1621 agttaccggg tttcgccgga gctacgttcc gcggtggtgt tcacggtgca ggacgtgctg
     1681 gccgacccgc cgttttcgcg tcttgatttc gtttcgtgtc ggaatttact gatctacctg
     1741 cgtccggagg cccaggcgaa agttctggcg ctgttccatt ttgccctgag cgaaggtggc
     1801 atactgttgc ttggaacatc agagaccacc ggcgctgacg acggcaagtt cggtgtgatt
     1861 tcgaaacaca accggatata ccggcacatc ggacgcagcc ggcccgggga attcggcttt
     1921 atccgcgggc ccggcgacgg cgtgcgtatg ccggcccggc ccggccactc ggccccccct
     1981 tcgcgccagg cggtcctggc ggaactgtgt cggcgcatgg tgatggagac ttatgcgcca
     2041 gcagcggtac tgatcaaccg aaagcatgaa tgcctgttct ccgtgggccc gacagaccgg
     2101 ttcctgcgtg tcgtgcccgg acacccatcc catgatcttc tggcgatggc acggcagggc
     2161 gtgcggacca agcttcgttc ggcgattcag cgggccaccc aggagaacgt acccatcgtc
     2221 atcccgggtg gccggatcag tgaagacagt cctgcgggga cgttcagcat agccgtgcag
     2281 ccgttccgca acgacggcga ggatctgctg cttatttgtt tcgttaacga tcccaaggcc
     2341 aaactggtcc gcgataaatc tggtgcgtcc cgggacggcc cgcgggtcgt ggaactggaa
     2401 cacgaattgg atgcgacgcg aaccgagctt cagggcgcca tccacaatct ggagatttcg
     2461 ggcgaggagc agaaggcgat caatgaagaa gcgtggtcgg tgcaggagga atatcagtcc
     2521 accaatgagg aactgctgac ctcaaaagaa gagttacagt cgctgaacga ggaactgacc
     2581 gcgctgaaca gtcagttgca ggaaacgctg gagcggcagc gcacaacctc caacgacttg
     2641 cagaatgtcc tttacagtac cgatgtcgcg acactgttcc tcgacaaagg cctgaacatc
     2701 cgctttttca cgccggccac gaaggcgctg ttcagcatcc ttcccggcga tatcggacgc
     2761 ccgctgtcgg atttgaactc tctggccgag gacggcaacc tgctggccga tgcccagttg
     2821 gtgctgcgga ctctgcagcc gacggagcgg gagatcgaaa catgcactag ctcgtgcttt
     2881 atccgccgta tcctgccata tcgtacgcag aacgacgggg tggaaggcgt cgttatcacc
     2941 ttcgccgata tcaccgaacg gcggcatgcc gcggacgaac tcggggtcgc gaagcggcag
     3001 gcagatctgg cgaacgccgc gaagtcgcgc ttcctcgccg cggcgagcca cgaccttcgc
     3061 caaccgctgc aaacgctcgc gctggtgcag ggattgctgg ccaagaacgt cgaaagcgaa
     3121 aaggccagga agctggtcag ccgcctggac gagacgctgg gtgcgatgtc gggcatgctg
     3181 aacacactgc tcgacataaa tcagatcgag gccggcacgg tccatgccga aatcatggat
     3241 ttcccgatcg atggcctgct ggggcagatg cgggaagagt tcacctatca cgcccaagcg
     3301 aaggggctga ccttgcgggt cgttccgtgc ggcctgttgg tccgcagcga tccccggctg
     3361 ctggagcaga tgatccgcaa cctgctgtca aacgcactga aatacaccaa acgcggcaag
     3421 attctgctgg gctgccggcg gcacaagggc acgctgagcc tccaaatctg ggacaccggg
     3481 atcggtattc cggataccga acttcagtcg attttcgagg agtactacca gctcgacaac
     3541 gccgcgcgag aacgtagccg tgggctcggc cttggtctct cgatcgtgca tcggctgggt
     3601 gtgttgctgg gtcatacggt ccaggtgcga tcacgcccgg gccgaggatc ggtcttctct
     3661 gtggagatca aactggcacg taacgggaga gcgtcgcgcc cggcggaagt tgcactcggt
     3721 ttatccagca agggaaacga ggcagatcat cacgtcggct cgattcttgt cgtcgaggac
     3781 gacccggatg tgcgcgaact tctggaagtg tttctgaggg acgagggcca cgaggtcacg
     3841 tcggcccatg acggcatcag ggcctgtgaa ctggtgacgg gcggactggt gcggccggac
     3901 cttatcctgt cggactacaa tctgccgaac ggcatgaatg gcacggcggt cgccaagctg
     3961 ttgcgcgatg ccctgcaaca cccggtgcca accatcatcc tgaccggcga catatcaacc
     4021 ggaaccctaa gcagcgtcgc tctgcaagac tgcgtgcaac tcaacaaacc ggtgaaactg
     4081 agggaactga cgcaggcaat ccaacgcatg ctgcctctat cacggacggc ggttcaggtt
     4141 cgggcacccc gccccgccga agttcctggc gatggcggac cgccggttat tttcgtcgtc
     4201 gacgatgacg acggcatccg tggcgccatg cgggctgtgc tggaagacga cgaccgggtg
     4261 gtcgaggatt atgatacctg cgaggcattc ctcgccgcct tccggcccgg gcgggaagcg
     4321 tgcctagtga tcgatgcgta tcttcccggc atgaatgggc tgactctgct gcggcggttg
     4381 cgggaggcgg gccatcgttt gccggccatc atgatcactg gcaacagcga cgtcgcgatt
     4441 gctgtacagg cgatgaaggc gggggcatcg gacttcatcg agaagccgat cagtcgcggc
     4501 gaactgctgg gatgcgtcga tcgcgcgctt gagcaatcgc gggattccgg caagcggacg
     4561 gcgtggcagg cggacgcggc gactcatatg gccgggctga cgccgcggca gcaccaagtg
     4621 atggaaatgg tgctcgccgg tcacccaagt aagaatatcg ccgccgacct tggcatcagc
     4681 cagcgcacgg tggagaatca ccgcgcctcg attatgacca agacgggcac gaaatcactg
     4741 ccggcgctgg cacgactggc ccttgccgcc gccgtgaacg atgccgatga gcctgccagt
     4801 taatccaggg catggacggt tgtcgcgcag cacctaagcg gctcctcctc aatctgcgtg
     4861 ggtcttcctc aaagtgtgtg gttgcatctg acggtcagct ggaccgcgga ggatcacttg
     4921 tcctggcggt tccgtcagcg ctcgcgccac gctccttgtt cgccttcgcg gggtgcgggt
     4981 atagggctgc ggcgagaagg attggctgat ggaatgcgtc gggtgcggct cagccgccgt
     5041 ttgagaacgg agcgagcgca ccgctcaggg ctaccgccgg ttccgctgtc gcccttgcgg
     5101 caagcagttc aacgagcgga gttccggctc tctgaaccgg acgcagtatc ccagtgacgt
     5161 catcgccctc gttgtgctct ggcgtctgcg atacaagctc gccctgcgcg atctgccgga
     5221 gatgttcctg atccgcggca tcgtattcag ccatgaggcg gttcgtgact gggaagccaa
     5281 gctcacgccg gcgttggctg aaagtttgcg gcggcgccga cgcggcaagg cgggccgaag
     5341 ctggtacgtc gatgagacgt acatcaaggt ccacgggcac tggcgctacc tctatcgtgc
     5401 catcgatcgg tcgggcacgc ttgtcgatgt gatgttcagc gagcaccgcg acatggcggc
     5461 cgcgaaggcg ttcttcgagt cggccaagat ggtcaccggc gtcacgcccg cccgtgtcac
     5521 cacggatggg cacgacagtt atccgcgtgc gatccggacg gtgctgggca caggagtgcg
     5581 gcatcgcgac aatcagtatc tcaacaaccg gttggagcag gatcatcgcg gtgtcaaagg
     5641 ccgctacggt ccgatgcgtg ggttcaagtg cccgcgatcg gccggccgat tttgccgggc
     5701 ctatgacgag ttgcgcaact tcctccgatc tcgctcccga accaatcaga aagtctccgc
     5761 tgattaccgg aggttccact ttctccgccg taccgcaacg gttttgagcg tgttggaagc
     5821 cgcctgaata agctcatccc ccagccgatg acgattactt gctggcacga gcgctgacag
     5881 aactctacgg cgccccgcca cggaggccgc gcgggctcca cgacgttgtt atgagcgaga
     5941 ccgggaaatc gggagaagac ttaccaggac tgtgttaaga acggtacagt tccgggaggc
     6001 ggatcatgaa gctatcgaac acggatcaac attatggtgc cgcggcaatt gcactccact
     6061 ggttgatggc gatattcatc gtctccctgg tggcaatggg aatctatatg gtccggcttc
     6121 cggatgttgg cttcaacatc aagaagatca tcctgattct ggctcataag gagatcggtg
     6181 tgttggtgtt gacgctggcc ggtgcgcggc tggcctggcg tctgctgaac ccgctgccag
     6241 gcttggtcaa taccgtcccg gaatggtaaa aagtggcg
//
LOCUS       DATAVD010001302         4230 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_310109, whole genome shotgun sequence.
ACCESSION   DATAVD010001302 DATAVD010000000
VERSION     DATAVD010001302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4230
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310109"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..1150
                     /locus_tag="VHX39_24745"
     CDS             113..1150
                     /locus_tag="VHX39_24745"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3994395.1"
                     /translation="MRFGLFGAAQAQRGGGPDVDSAAGFNDYIEYLIEAESLGYHSSF
                     IVEHHFTGFGQVSATLNLLSWIGAKTTTLRLGTAVLVLPWHNPVLLAEQAATVDLLSG
                     GRLDFGVGKGYRHNEFAGFRIPMEEGGARFEESIDIITKSWTSNERFSFHGKYWQFDD
                     IVVEPPTNQKPHPPFWQGAGHAESIRKVAARGHNLLLDQFASIDETINRFNTYKAAML
                     ANGFGFDPSQVGVARAFFVADTEAEKAAAVERRMAGQRRLHTISQRPDGNNTASIMAF
                     SDTREASEESALYGTPDEICRKIERLQAQGVEYILLNGGGTSRTNLQRFAREVMPHFR
                     TEGASSTAAAE"
     gene            1156..1989
                     /locus_tag="VHX39_24750"
     CDS             1156..1989
                     /locus_tag="VHX39_24750"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3994396.1"
                     /translation="MADRVAIVTGGLRGLGRGMTLGLAASGVRVLAVGHLPEDVADMQ
                     GTANVRPMIADLRSPAACDKVVAEALSAFGRLDILVNNAGLTFTYIDPARFRREKPRK
                     FWEVKDEVIQNVMDTNYVAADQMGRRVAPILVNQGWGRIVNVTTKLDTMNREGSVPYG
                     SSKAALEMTTEIWAKEAAGSGMTVNIVNPGAGANTPGMNQELKDWSREGRVPRLVEPD
                     EMVPPLLFVVSPAADRVNGYRFDALTWDAALPPVEAARKNGRPAGFVLHPQDEGAFPA
                     G"
     gene            2029..2814
                     /locus_tag="VHX39_24755"
     CDS             2029..2814
                     /locus_tag="VHX39_24755"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3994397.1"
                     /translation="MENWNPSPLDPGLIELHRRGSGKPLVLIHCLGQSWRFWDVLDPL
                     IDRNELIAYSLPGHPGAALPGHQYGVPELTEQLRHAVLREGLTRFHLMGISLGGSVAQ
                     HFAGTYPDMVDRLVLADCSPRYDDEARANWPVRAAAARKDGVKSLIPFLMQVFFTADS
                     IAANGPDVRHVRETFEACDGEAYGLACEALATLDAREQTKKVVAPTLIMLGSNERQSF
                     WDAAKWMNETIAGSKVVEVPAAGHASVRERPEFAVQQLRAFLD"
     gene            complement(2821..4182)
                     /locus_tag="VHX39_24760"
     CDS             complement(2821..4182)
                     /locus_tag="VHX39_24760"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994398.1"
                     /translation="MVQTQALTAELIGRAIDKITLNNALVFIIGVAAAGFFFDSFDIV
                     IVSYALPMIRKEFGLDPTQVGLIGSSALAGMGLGSWLWGWVADRWGRRVVFAATVLMF
                     SLCTGIAGLSMSLGFLIGARFMTGLGLGGMVPIDQALVAEYAPARIRGRVSAMLPLCW
                     PIGIFAAAGAGLLVVPHLGWRWLFALGALPAALVFFIRRGVPESPRWLADRGRHDEAR
                     KSLAYVGVDDAMIAQARSELAAEPLVPPVRDATFGDLFTARYARRVAHTWLMWFCSGF
                     AATAFSVWLPSIFATYYHINLTRTLVYTFIVAGTSVVGRVFAFGLIDLFGRKALIVIG
                     YGVAGGAALLFTQATTETALLATAMLYGFFADIGSLAMTVYTPEVYPVRIRGKGAAIA
                     MGWGRFGGMVSPVVAGLLISADNLALVWGLMAAFQFTSAGLTLLMARETSGRNLEAVA
                     KPA"
BASE COUNT          827 a         1325 c         1385 g          693 t
ORIGIN      
        1 aggcggatgt ggaagaactg ttcgcccccg ccggctgacc cgtcattggc atcgggatgg
       61 acatttcggc actgaccgga caaccttgtg cccaataccc agggaggcaa ccatgcgttt
      121 tggacttttc ggcgccgccc aggcgcagcg cggcggcgga ccggacgtcg atagcgcggc
      181 cggcttcaac gattacatcg aatatctgat cgaggcggaa agcctcggct atcacagttc
      241 cttcattgtc gagcaccact tcaccgggtt cggtcaggtc tcggccaccc tgaacctgct
      301 tagctggatc ggtgccaaaa cgacgacgct gcgtcttggc accgccgtcc tggtgctgcc
      361 ctggcacaat ccggtgctgc tggcggaaca agccgccacc gtggacctgc tgtcgggcgg
      421 ccggctggat ttcggcgtcg gcaaagggta ccgccacaac gaattcgccg gcttccgcat
      481 tcccatggag gaaggcggtg cccgctttga ggaatccatt gatatcatca ccaagtcgtg
      541 gacgtcgaac gagcggtttt cgttccacgg caagtattgg cagttcgacg acatcgtggt
      601 ggagccgccg accaaccaga agccgcatcc gccattctgg cagggcgccg gccatgccga
      661 aagcatccgc aaagtcgccg cgcgcggtca taacctgctg ctggatcagt tcgcgtcgat
      721 cgacgagacg atcaatcgtt tcaataccta caaggcggcg atgctggcca acggtttcgg
      781 gttcgacccg tcccaggtcg gggtagcccg agcgtttttt gttgcggata ccgaggcgga
      841 gaaagcggcg gcggtggagc ggcgcatggc cggccagcgt cgtctgcaca ccatcagcca
      901 acggcccgac ggcaataata cagctagcat catggcgttt tccgacacca gggaagccag
      961 tgaagagagc gctctgtacg gcacgccgga tgaaatctgc cgcaagatag agcggctgca
     1021 ggcgcagggc gtcgaatata tcctgctgaa cggcggcggc acctcgcgca ccaatctaca
     1081 acgtttcgct cgggaagtga tgccgcattt ccgcacagaa ggcgcatcca gcacggcagc
     1141 ggcggagtaa cggaaatggc ggatcgggtc gcgatcgtta cggggggatt gcgcgggctg
     1201 gggcgcggca tgaccctggg tctggctgca tcgggcgtgc gggtcttggc cgtcgggcat
     1261 ctgccggaag atgtcgcgga catgcagggc acggccaatg tgcgtccgat gatcgccgac
     1321 ctgcggtccc cggcggcctg cgacaaggtg gtggccgagg cgctttcggc gttcggacgg
     1381 ctggatatcc ttgtcaacaa cgccggcctg accttcacct atatcgatcc ggcgcgattc
     1441 cggcgcgaaa agcctcggaa gttctgggag gtgaaggacg aggtaatcca gaacgtgatg
     1501 gacaccaact acgtcgccgc cgaccagatg gggcgtcgcg tggcgccgat cctggtgaac
     1561 caggggtggg gccgtatcgt caacgtcacg accaagctgg acacgatgaa ccgggaaggt
     1621 tcggtcccct acgggtcgtc caaggcggcg ctggagatga cgacggaaat ctgggccaag
     1681 gaagccgccg gctccggcat gacggtcaac atcgtcaatc cgggcgccgg cgcgaacaca
     1741 cctgggatga accaggagtt gaaggattgg agccgcgagg ggcgcgtacc ccggctggtt
     1801 gagccggacg aaatggtgcc gcctttattg tttgtcgttt cgccggcggc ggatcgggtg
     1861 aacggctatc gcttcgacgc gctgacctgg gatgccgcgc taccgcctgt cgaggccgcc
     1921 agaaaaaatg gccgaccggc ggggttcgtg ctgcatccgc aggatgaagg cgcattcccg
     1981 gcgggatgac cgccctgccc taaaaaatcc aaacaaagga aacgatccgt ggagaactgg
     2041 aatccgagcc cgctcgatcc gggcctgatc gaactgcacc ggcgcggttc ggggaaaccg
     2101 ctggtgctga tccattgcct gggccaatcc tggcggttct gggacgtgct ggatccgctg
     2161 attgaccgga atgaactgat cgcctacagc ctgcccggcc atcccggggc ggccctgccc
     2221 ggccatcaat acggggtgcc cgaactgacc gagcaactgc gccatgctgt cctgcgcgag
     2281 gggctgacgc ggttccatct gatgggtatc tcgctgggcg gcagcgtggc gcagcatttc
     2341 gccggcacct accccgacat ggtggacagg ctcgtgctgg ccgactgttc acctcgttac
     2401 gatgacgaag ctcgggccaa ctggccggtg cgggcggcgg cggcgcggaa ggatggggtg
     2461 aaaagcttga tcccgtttct gatgcaggtg ttcttcaccg ccgattcgat cgccgcgaac
     2521 ggtccggatg ttcgtcacgt gcgcgagacg ttcgaggcct gtgacggcga agcctatggg
     2581 ttggcgtgtg aggcgctggc taccctcgac gcccgcgagc agacgaagaa ggttgtcgct
     2641 ccgacgctga tcatgctggg gtcgaacgaa cgccagtcgt tctgggacgc ggcgaagtgg
     2701 atgaatgaaa ccatcgccgg cagcaaggtt gtggaagtcc ctgcagccgg ccatgcttcg
     2761 gtgcgtgaac ggcctgaatt cgcggtgcaa cagttgcggg catttctgga ctgacgtcag
     2821 tcacgccggt ttggcgactg cctccagatt gcggccgctg gtttcacgcg ccatcagcaa
     2881 ggtgaggccg gccgaggtga actggaacgc cgccatcagg ccccacacca gggccaggtt
     2941 gtcagcgctg atcagcaggc ccgccacgac gggcgaaacc atgccgccga atcggcccca
     3001 gcccatagcg atcgcggcgc ccttgccgcg aatgcgtact ggatagacct cgggtgtgta
     3061 gacggtcatc gccagcgatc cgatatcggc gaagaagccg tacagcatgg ccgtcgccag
     3121 cagtgcggtt tccgtcgtcg cctgggtgaa cagcagcgca gcgccgccgg caacgccgta
     3181 gccgatgaca atcagggcct tgcggccgaa caggtcgatc aggccgaacg cgaacacccg
     3241 cccgaccacc gaggtgcccg cgacgatgaa ggtatagacc agcgtccggg tcagattgat
     3301 gtggtagtag gtcgcgaaaa tcgacggcag ccacacgctg aatgccgtcg ccgcaaagcc
     3361 ggagcaaaac cacatcagcc atgtatgcgc aacccggcgc gcataccgcg cggtgaacag
     3421 gtcaccgaat gtcgcatcgc gcaccggcgg caccagcggt tcggcggcca gttcgctgcg
     3481 cgcctgcgcg atcatcgcat catcgacgcc gacataggcc agagatttgc gggcttcgtc
     3541 gtggcggcct cggtcggcca gccagcgcgg cgattccggg actccgcggc gaatgaagaa
     3601 gaccagcgcc gccggcagcg cgcccagggc aaatagccag cgccagccca gatgcggcac
     3661 gacaagaagg ccggcacccg ccgcggcgaa gataccgatc ggccagcaca gcggcagcat
     3721 cgcgctgacc cggccgcgaa tgcgcgcggg ggcatattcc gccaccagcg cctggtcgat
     3781 cggaaccatg ccgcccaggc ccagaccggt catgaaccgg gcgccgatca gaaatcccag
     3841 cgacatcgac aggccggcga tgccggtaca cagggaaaac atcagcactg tcgcggcgaa
     3901 cacgacgcgc cggccccagc ggtcggcaac ccagccccac agccacgatc caagtcccat
     3961 tcccgccagt gccgaggacc cgatcagccc gacctgggtg ggatccaggc cgaactcctt
     4021 cctgatcatc ggcagcgcgt aggaaacgat gacgatatcg aatgagtcga agaaaaaccc
     4081 cgccgccgcc acaccgatga tgaagaccag ggcattgttc agcgtgatct tgtcgatcgc
     4141 ccgcccgatc agttcggcgg tcagcgcctg ggtctgaacc atatggtttc attctcctcc
     4201 cgacggtttt tccaacgttg acccaccccg
//
LOCUS       DATAVD010001303         7206 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3662972, whole genome shotgun sequence.
ACCESSION   DATAVD010001303 DATAVD010000000
VERSION     DATAVD010001303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7206
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3662972"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            578..1969
                     /locus_tag="VHX39_24765"
     CDS             578..1969
                     /locus_tag="VHX39_24765"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994399.1"
                     /translation="MIAPTQTAAYILGKKLDTIPFSAYHMLLIVVLGTVGFVEGYDLA
                     LGGSLIVLAKGPLGLTGEDIRWLVAGPTFLVVVGGFTASALSDRLSRKLILQIGVVIS
                     TLFTLLIPLAQSAEQLIVIRMITGIGLGFAIPAAFPIAAELMPAKHRRTYGAIYEVML
                     ASAFTVLPFVAFLLTDNAQGFRLIALPGGLALGVVPLLVHYAIPESPRWFLRRGQPQA
                     AVNAVNLMIRRCGNRVPPMTVGQLGPNLTLGREDLPPFMALFRAGQLRWTVVGILCSI
                     SASSAYYTCAILLPKALVDQGGAVALSFGLASVLFMASIPGKLFTGYLMEIIGRRWTM
                     TYSLAGSLPGIALMAGAHWIGGLAPVVFIAGALITGFTVLAAFPCTRVYLSEQFPTAL
                     RGRGHFFGESTARLMAGVLFPLFMERHTADPVVFFGTLLCVVGIGAFLPLLIGRETVG
                     HLETVTEEVRAAA"
     gene            complement(2191..2400)
                     /locus_tag="VHX39_24770"
     CDS             complement(2191..2400)
                     /locus_tag="VHX39_24770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994400.1"
                     /translation="MIGITTRKHRGFAIHIERNGAVNPPFKATIRRLVVEIHPRPGVF
                     KGATEGDVTSQAKVAIERILATESA"
     gene            complement(3386..3460)
                     /locus_tag="VHX39_24775"
     tRNA            complement(3386..3460)
                     /locus_tag="VHX39_24775"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3426..3428),aa:Asn,seq:gtt)
     gene            complement(3594..3749)
                     /locus_tag="VHX39_24780"
     CDS             complement(3594..3749)
                     /locus_tag="VHX39_24780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994401.1"
                     /translation="MSYLTADLGDAKSISEGGRISVANTLAEDSGVQEGMAARAAASL
                     LLQAAVG"
     gene            4244..4327
                     /locus_tag="VHX39_24785"
     tRNA            4244..4327
                     /locus_tag="VHX39_24785"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4277..4279,aa:Leu,seq:caa)
     gene            5394..7058
                     /locus_tag="VHX39_24790"
     CDS             5394..7058
                     /locus_tag="VHX39_24790"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX3994402.1"
                     /translation="MTIDVATGIARILKQEGVGWVSTFPVCRVNNALGREEVPMLMMR
                     DDRYAVAVADAFSRITAGSRIGVCTFQGGVNAAGMQYAYAGLAQAFEDGSPVLCITDG
                     VPAGASGNSQYDVASAMKTVSKWFGYLDKPERTPEFMRRAFTMLRSGRPGPVILAIPN
                     ATATYDETADPYHPVKGWKTAPDPADVRAAVEQLLAARNPLIYAGEGVIYAGASDELK
                     AFAEQVNVPVITTLKAKGAFPENHPLFVGVRGDQIAHYLNKSDVILAIGSSLSPGRFS
                     HGIPDPAKKTIIHCNIDELHINKMYPTAHAVIGDARLTLQALRQEVSGRTSGAGRSAG
                     NVAAEVKAARDEALARYRQVMNSGETPINPYRVYGDLMQVLDLSNSFVTHESGNTRDQ
                     LSTVFDTIIPRGFLGWGNVSTLGFSLAAAIAAKKAFPGRASVAVTGEAGLGYMLGNLE
                     VLLREKLGITVVHISNGGFAGYGPGFWGPGHDPFTHQVMGYDQVDMSKVIGALGFHTE
                     RVSEPAEVIPALRRALDVNASGRPAYIEFICCQYPVYGGWVGRSAE"
BASE COUNT         1307 a         2170 c         2218 g         1511 t
ORIGIN      
        1 gcccaagaca ctgggtcgcg atgctcacgg cagacaccgg ctcggaatgg atgggcacgg
       61 cactgcggcg acgggcgcgc ggagatcgga cagtgcgttc acggtcgtcg ccggaggcca
      121 gggttgatcg ccgaaggtgc ggtccgccgt ggttgtggta gccgttgcgg caggacgcgg
      181 ggacaaatgc caccagaggc attttccact acaaagtatg taggggtttt actgacaata
      241 tgggccgtcc cacttctgtc tcgacagttg cacatcgtcc ggttattttc cctctaccgc
      301 aatttcctgg ctgacatcgc ggtggaccgc agttaaactg tggtaaggct caggtaatgg
      361 gcaggcataa gaccggacgg cgaggcaacc gccgccagtt caaaaaggga gcaaaacgtc
      421 gatcggcggc acattcaggt gcggcccacg cgggacagca gggcggtgaa tttgtgttgg
      481 caaccggtcc gatttgtggc cggttgtttg tggcagtcct cttgttttcc gcagcatctg
      541 atcgccgccc ggaacgactt cagttcggga ggataacatg atcgcgccga cgcaaaccgc
      601 ggcttatata cttggcaaaa aactcgatac catcccgttc agtgcctacc acatgctgct
      661 gatcgtggta cttggcaccg tcggcttcgt tgaaggctat gatctggccc tcggcggctc
      721 attgatcgtg ctggccaaag ggccactcgg cctgaccggt gaggatattc gctggctcgt
      781 cgccggtccg acattcctgg tcgtggtcgg aggcttcact gcctcggcgt tgtccgaccg
      841 gctgagccgt aagctgatct tgcaaatcgg cgtcgtcatc agcacgctgt tcacgctgct
      901 gatccctctc gcgcaatcgg ctgagcagct gatcgtcata cgcatgatca caggcattgg
      961 cttagggttc gcgatcccgg cggcgttccc gattgccgcc gaactgatgc ctgcaaaaca
     1021 caggcgcacg tatggcgcga tttatgaggt gatgctggcc agcgccttta ccgtgctgcc
     1081 atttgtggcc tttctgctga ccgacaacgc gcaggggttt cgcttgatcg cgttgcccgg
     1141 cggcctcgcg cttggtgtcg tgcctttgct ggtgcattac gccattccgg aaagtcctcg
     1201 ctggtttctg cggcgaggcc agccgcaggc agcggtcaac gcggtgaacc tgatgatccg
     1261 acgttgcggc aatcgcgtgc cgccgatgac ggtgggtcaa cttggtccga acctcaccct
     1321 gggccgcgag gacctgccgc cgttcatggc attgttccgc gccggccagt tgcgctggac
     1381 tgtggtcggg atcctgtgca gcatcagcgc cagttccgct tactacacct gcgcaatact
     1441 gttgcccaag gcgctggtcg accagggcgg tgccgtcgcg ctgagcttcg gcctggcgtc
     1501 agtgctgttc atggccagta tcccggggaa attatttacc ggctatctga tggagatcat
     1561 tggccgccgg tggacgatga cctattcgct ggccggctcg ctgccgggca tcgcgctgat
     1621 ggcgggcgcg cactggatag gcgggttggc cccggttgtg ttcatcgccg gggcgttgat
     1681 caccgggttc actgtactgg cggcgtttcc ctgcacgcgg gtctatctgt ccgagcaatt
     1741 tccgaccgcg ttgcgcggcc gtggccattt cttcggcgaa tcaacggcgc ggctgatggc
     1801 cggggtgttg tttccgctgt tcatggaacg ccacaccgcc gatccggtcg tgttcttcgg
     1861 cacgctgttg tgcgtggttg ggatcggcgc cttcctaccg ctgttgatcg gccgcgaaac
     1921 ggtcgggcat ctggaaaccg tgaccgagga agttcgcgcg gccgcctgac ctgggcttgg
     1981 cctgcggcaa ctgggttacc acccgcacct gctcattcac gcctgacaag cagtgacggc
     2041 tggtctgttg cagcttgcgt gctgagatgg gccgggcagt tggtggaaag gtatgacgct
     2101 gctcgcggtg acgctttgct ggcactgatt gagcgagtgc ctgccgaccc cgaaccatcg
     2161 ccccgatctg accagcccgc gctcgcggcc ttatgccgac tctgtggcca gaatgcgctc
     2221 aatcgccact tttgcctgcg aggtcacgtc cccctcagtc gcccccttga acacacctgg
     2281 tcgcggatga atttcgacca ccaggcgtcg gatcgttgcc ttgaatgggg gattgaccgc
     2341 gccgttacgc tcgatgtgga ttgcaaaacc tcggtgcttg cgtgtggtga tgccgatcat
     2401 gtcgcgtcct ttgcgggttg cgcagcgact gacggttgtc cggtcagacc ggcggacaaa
     2461 cgcgcgtggg cgacaatggt tccatggtcg cgagggcggc tttttgtaac gggccagttt
     2521 cagcttcatc cgtttgcggc aaaagcgaat tgcatggttt cacgataatc aattggggcg
     2581 ggatggttca ttttggccat gtcgatggcg ggaaccaaac agatggtcct ccaggtaacg
     2641 gcaccaccca cacggacggg gcggtctaca gaaacaggag ttggaccatg aattcgatga
     2701 aaacccttac gtttgccggt gttgccggtt tgtgcctcgc acttggtgct tgcaccccgc
     2761 ctcctgttac cggttcggtg cagtcaggct cctccgacgt tgagacgctc accccgcacg
     2821 gctcatacaa cgtcacgact caccctcaat ttgacttctc gggctcagac ggcggcagcg
     2881 gcaacgagta ggccgggaaa cccgacgcga aggaaagggc cggtgttcgc accggcgttt
     2941 tcgatgtgcg tgccatgccg cccctcactg ggcggctttt tggttgttgg ggggtgccag
     3001 cggtctgtgg tccggcgcca acggtgtaaa ctacgccgtt tgaatgcctg tcaccggcgc
     3061 acgtacgtcg gtcatggcgt tgagagactt ctgcgcgtcc cgccggtttg cctggtctac
     3121 cgtcgggttc ggaggcaatt ttgagttgac gttcacgtga ccgttaccaa cgacgatggg
     3181 cgtcttgtgt gcctttaggt cgtccgaact ttccgtgatc gcccttatca tcggtcgcag
     3241 ctcatctgcc cagacatggc acccgccgag ttgcttcata tagcttgtag cttggacgcc
     3301 tggcctcggc cccggcactt gttgctccgg atccgaaccg cgtcttttcg gtctgcgaaa
     3361 aagttccaca agcaattgaa tttactggct cgggcggtag gattcgaacc tacgaccaat
     3421 cggttaacag ccgattgctc taccgctgag ctacgcccga acaggccggc agggaggcct
     3481 atctagaggt gtggccgtgc aaggtcaaca atctggtaac agtgtacatt ttggcccgtg
     3541 acctgccgct ccacgtctgg ccgccaggct ccgccgggct cggcgtccgc cggtcatccg
     3601 accgccgcct gcagcagcaa tgaagcagcc gcgcgtgctg ccattccttc ctgaacgccc
     3661 gaatcttccg ccaacgtgtt ggcgacgctg atccgcccgc cctcggaaat gcttttggca
     3721 tcgcccagat cggcggtgag gtacgacacc gcggcacatg ccgatcccca tcgcctgcaa
     3781 gatctgcagc ccggagacgg ccatccgatt gcgtccgaat ccgccgtcgc tgccgaccac
     3841 gctgcgcggc acacgattga gcaagcaaat cgacggcgca gctgcggcat aggcagcgtg
     3901 cgccagcacg tccttcgggg catcgattgg gaccagcgat tcgctcacca acgacgcggg
     3961 agccggtgac gacggcgttg cggttcgggg tggtcaggct atggaaatcc cgattgccat
     4021 actccagcgg cgggatcccc gcgttggcct tcgctgcgcc gctcaccgac gccttgcggg
     4081 gcgtctcggg tcaggcgttt cgtgctgcat tttactttcc gcaggtttga ctgagcggga
     4141 tattgtgtcc gaccacggtc tgcattgcca cctcctgccc gcgacattgg tcggtggttc
     4201 cgtatttgcc gtgaaccaat gatcctgtat gatcggatcg gttgcgagag tggcggaacg
     4261 gtagacgcag tcgactcaaa atcgaccgcc gcgaggcgtg ggggttcgaa tcccccctct
     4321 cgcaccaatg ggcctcgcag gtccctttgc gggacaaagg ctgtccgacg agaacacatc
     4381 tccccgctcg taacaggcct ctcaccatgt atacgaggca aagcgtcaaa ctgtcgcgcc
     4441 gtgccgatgt cgcgacgctg atggatcaca tgaaaggctc gttgcacttt gaggttctgc
     4501 gattgaaccg agacgcaatt gctttcattg gaaagcaata atccgtatag tagcggaatg
     4561 atacggtact ttgcacttat tatgcaacct ggcgaacgac gtgcatacgg tttttgatcc
     4621 agaatatatc atgatgtgca aatagacatc tttcctcttg tatatgacaa accatctcga
     4681 tggctggtat ccgccaaacg actttcgtgc catcgagagc ttcttcttcc ttgggcactg
     4741 ccatcggctg aatcatcgca acttctgatc ctcttgaaaa aaatccggcg catgtgcgga
     4801 ccggggcgca agaatgtgcc accaatttca gcggcgatgc cgcgacccgt gccctaaaat
     4861 atttagagga acagaggcac agagtaacag agaagatcaa ttggactgcc ggatctcaac
     4921 attaaaccac aacaatgata accacaagga ggattcacag gcagtcaccc cgctgctacg
     4981 aaaatatgcg tctttcgtcc tgtatatgtg acaaactcca taatggccgg tacccacaaa
     5041 acgattttcg taccatcgaa gtgtccgccc gcgggctggt tgattgtgtt gtaaaatcac
     5101 gccttctgat cataaggcca tcgatcgtcg gaactccggc gagcaccacg cactgcgcaa
     5161 gcgtgacgcc ggccgccgcc cagttggcgg agcaattctg gtgtggttcc gggatgatct
     5221 gatgcccggc cgcctcttgc cagggcggcg gatgcccgtc attttccgca ttgccccgca
     5281 atcgcgaggc caatcacaac gccgcggcaa tgggcaacgg cacgcgtctg atcactcgtg
     5341 cttcaatgcg ccacacgaag accgctcggc tccaggcaaa ggagacccca tccatgacga
     5401 tcgatgtagc gacgggcatt gcccgcattc tcaagcagga gggcgtgggc tgggtctcga
     5461 ccttcccggt ctgccgggtg aacaacgcgc ttggccggga agaagtgccg atgctgatga
     5521 tgcgcgacga ccgctacgcc gtcgcggtcg ctgacgcgtt ctcccgcatc accgcaggct
     5581 ctcggatcgg ggtctgcacc ttccagggtg gcgtcaatgc cgccggtatg cagtacgcct
     5641 acgccggtct ggcgcaggcc tttgaggatg gctcgccggt gctgtgcatc accgacggcg
     5701 tgccggccgg cgcctcgggc aacagccagt acgatgtcgc atcggcgatg aagaccgtgt
     5761 cgaagtggtt cggctatctc gacaagcccg agcgcacgcc ggaattcatg cgccgtgcct
     5821 tcacgatgct gcgcagcggc aggcctggcc cggtgatcct ggccattccc aatgccacgg
     5881 ccacttacga tgagaccgcc gatccctatc atccggtcaa gggctggaaa acggcgccgg
     5941 atccggcgga tgtgcgcgcc gccgttgaac agcttctggc cgcccgcaac ccgctgatct
     6001 acgccggcga gggggtgatc tatgctggcg cctcagacga gttgaaagcc ttcgcggaac
     6061 aggtcaatgt gccggtgatc acgacgctca aggcgaaagg ggcgttcccg gagaaccatc
     6121 cgctgtttgt cggcgtgcgc ggcgatcaga tcgcgcatta cctgaacaag agcgacgtca
     6181 tcctggccat cggctcgagc ctgtcgccgg gccgcttcag ccacggcatt cctgatccgg
     6241 cgaagaagac catcatccac tgcaatatcg acgaactgca catcaacaag atgtatccca
     6301 cggcgcacgc ggtgatcggc gatgcgcggc tgaccttgca ggcactccgc caggaagtgt
     6361 ccggccgcac ctcgggggct ggccggtcgg cgggcaatgt ggcggcggaa gtgaaggcgg
     6421 cacgcgacga ggcgctcgcc agataccgac aggtcatgaa ttccggcgag acaccgatca
     6481 atccctatcg ggtctacggc gatctcatgc aggtgctgga tttgtccaac tcgttcgtga
     6541 cgcacgagtc aggcaatact cgtgaccagc tcagcacggt cttcgacacc attatcccgc
     6601 gcggttttct gggctggggc aatgtttcga ccctcggctt cagcctggcc gcggccattg
     6661 ccgccaaaaa agcgtttccg gggcgggcat ccgtggcggt gaccggcgag gccgggcttg
     6721 gctatatgct cggcaacctt gaggtgttgc tgcgtgaaaa gctcgggatc acggtcgtgc
     6781 acataagcaa tggtggtttt gccggatatg gtcccggctt ctgggggccg ggacacgatc
     6841 ctttcacaca ccaggtcatg ggctacgacc aggtggatat gtcgaaggtg atcggtgccc
     6901 ttggcttcca taccgagcgg gtgagcgagc cggccgaggt gatcccggcc ctgcggcggg
     6961 cgctcgacgt gaatgcgtcg ggccggccgg cctatatcga gttcatctgc tgccagtacc
     7021 cggtgtacgg cggttgggtt ggacgtagcg cggagtaaaa cgatgccgaa gctgatcccc
     7081 gtcgccgacg ctctgggcaa gccgttctgg gacgccatca atcaacggcg gctcgtcctg
     7141 cagcactgca ccgaatgtga ccggctgcaa tatccgccgc agcaggcttg ccagcaatgc
     7201 ggttcg
//
LOCUS       DATAVD010001304         6408 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_684161, whole genome shotgun sequence.
ACCESSION   DATAVD010001304 DATAVD010000000
VERSION     DATAVD010001304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6408
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_684161"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(170..1123)
                     /locus_tag="VHX39_24795"
     CDS             complement(170..1123)
                     /locus_tag="VHX39_24795"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX3994403.1"
                     /translation="MPSDASVASVTFRQEYVPAPKRGPITLMLEDERKLALCLMLPTV
                     VLLALFIAYPFVNGILLAVTDTRVGVPGHFVGMANFTKIWSDDIFHVAVWNTCLYTLV
                     TTVFKLALGLWLALLLNRNFRGKAFMRAFILLPFIIPTVLSTFAWKWMFDPTFSVLNW
                     MLFHAHIIHSRINWLGDPVLAMISVIIVNVWRGVPFYAISLLAGLQTISPELHEAAAI
                     DGARAWNRFRHVTWPLLLPVTLVIVLFSVIQTFADFQLVYVLTGGGPANATQLFATYA
                     YQLGIGTGLLSQGAAISLAIFPILLLVVIVQLVYIRRAETL"
     gene            1479..2201
                     /locus_tag="VHX39_24800"
     CDS             1479..2201
                     /locus_tag="VHX39_24800"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX3994404.1"
                     /translation="MTITGDKGTQITAYTAKPAGPGPFPGVVLIHHLPGWSELYIETT
                     RRFAHHGYMAICANLYHREGGSDANPDDVAAKVRAEGGIADSQMVGDTEGAVKWMRAQ
                     PNHNGKVGLIGSCSGGRHAFIYACQKKDIDACVEQWGGRVVMGKEELNAKTPVAPIDM
                     TKDLSCPLLGLFGNDDRAPSPEQVNQHEAELKRLGKNYEFHRYDGAGHGFFYWHRPLY
                     RPEQCMDGWDKIWAFYGKYLAK"
     gene            2213..2518
                     /locus_tag="VHX39_24805"
     CDS             2213..2518
                     /locus_tag="VHX39_24805"
                     /inference="COORDINATES: protein motif:HMM:NF039404.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6295 family protein"
                     /protein_id="HEX3994405.1"
                     /translation="MCTSIIEIARAEGMAKRGDQWFPLSRSVVAYDHARHAPLGDVIT
                     LDFYNTGLGADARAAVELTLESAKELRAALDRAIAAADYEEAEVRGKGAVLNLVKAA"
     gene            2850..3785
                     /locus_tag="VHX39_24810"
     CDS             2850..3785
                     /locus_tag="VHX39_24810"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase A"
                     /protein_id="HEX3994406.1"
                     /translation="MALLIVDLDKRIGNATAWRDTFREQLPDLEIRIWPDAGSLADIE
                     YLAFMHPDFDSLPAFPNLKAMFSRSAGVESFIDHPKLPKAALCKVEPPGGDPMMTEYV
                     VMHVLRFHRDMPGYQAAQARREWRRTTIVRPEQRRVGFLGFGMMAQAPALVLKSLGFK
                     VSAWVRNPRADSDVPIFHGPQQLEPFLAQTDIAVCLLPLTKETEGIFCARTFAMMPRG
                     AMLVNVGRGKHVVEKDLIDALDSGQLSYAALDALFPEPLPPTSPLWLHPKVTVMPHVA
                     RRPTVAQIVTEIAANIRSIQAGARLLQEVDITTGY"
     gene            3880..4647
                     /locus_tag="VHX39_24815"
     CDS             3880..4647
                     /locus_tag="VHX39_24815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX3994407.1"
                     /translation="MRPNKIKQMWRDGQCVTLGWLSVAHGITAEVMSRQGFDALCIDM
                     QHGTSEISDLLPMLQAVSQTDTVPVVRVAWNEPAAIMKALDLGAYGIIVPLINTAAEA
                     AMAVAACRYPPVGMRSNGPVRAVHYGGADYVANANDEIVIMAMIETKEGLANLDAICA
                     TPGLDAVYIGPADLSFALGLAPRGDNPDPLHVATCDKILAAAHKHGIKCVMHCASAAF
                     AAGAVKRGFDMVMLTSDLSCMVAGARAQLDELRSKTA"
     gene            complement(4709..5347)
                     /locus_tag="VHX39_24820"
     CDS             complement(4709..5347)
                     /locus_tag="VHX39_24820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004272330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheX"
                     /protein_id="HEX3994408.1"
                     /translation="MTEPASEPGFTLSELELDALGELVNIGVSRAAASLGTMVGEQVL
                     LSVPSVMLVSRSRAAELISASRLDLLVAVRQAFHGDVSGRALLIFPEKNSLELVRAVA
                     GEELSLEDILELEHEALAEIGNIILNACIATVANLLQRSLTMSLPEIVRGTSDGLFDL
                     SVSLAEDVVLFVHINFSFKGRQVVGYVAMVMDFASLASLKQLVADVIRRMAG"
     gene            complement(5344..>6408)
                     /locus_tag="VHX39_24825"
     CDS             complement(5344..>6408)
                     /locus_tag="VHX39_24825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004272289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3994409.1"
                     /translation="GINLAKRRIAAGRYENIDTFLDAAATSAHRAAALTHRLLAFARR
                     QPLDRGPVDVNQLILEMEDLLRRSIGERIILQFDLADGLRPAVTDANQLENALLNLVI
                     NSRDAMPHGGTLRIETASAVVEPGATSMQDEAEPGEYTVISVADTGTGMPPETVAKVF
                     DPFFTTKPIGQGTGLGLSMVYGFARQSGGHVRVESEVGKGTTVWLYFPRDDRGAAKCK
                     ATPSPDTAVPEGTGETVLLVEDEPSVRLLIAEVLRELGYALIEAKDAEMAMPILASNV
                     RLDLMITDVGLPGVNGRQLAEIGRGHRPRLKVLFVTGYAEHATNRGDFLAPGMKMVTK
                     PFSLEAIAVTIREMIGSSRP"
BASE COUNT         1351 a         1964 c         1953 g         1140 t
ORIGIN      
        1 tccagaacgg cgcgtagttg ggcgcgctcc agggccggta cagctcgctg tccgggcgga
       61 tggtggtgat gaccatccag taaaacggaa acagcaacgc gacgacgaac gctgtcaccg
      121 ggacatagaa aaagacccag cgccgccaac gggctccctc gatcatggcc taaagggtct
      181 ccgcccggcg gatgtaaacc agctggacga taaccacgag cagcaggatc gggaaaatcg
      241 ccaacgagat cgctgcaccc tggcttaaca atccggtacc gataccgagt tgataggcat
      301 aagtggcgaa cagttgggta gcgttggctg ggcctccgcc ggtgagcacg tagaccaact
      361 ggaaatcggc aaacgtttgg atcaccgaga acaagacgat caccaaggtc accggtagca
      421 acaacggcca ggtcacgtgg cggaagcggt tccaggcgcg tgcgccgtcg atcgcggcgg
      481 cctcatgcaa ctccgggctg atggtctgca gcccagccaa caggctgatc gcgtagaacg
      541 gcacgccgcg ccagacgttg acgatgatga ccgaaatcat ggccaggacc ggatcgccca
      601 accagttgat cctgctgtgg atgatgtgag cgtggaacag catccagttg agcacgctga
      661 atgtcggatc gaacatccac ttccaggcga atgtcgacag cacagtagga atgataaatg
      721 gcaaaagaat gaaggcgcgc atgaacgcct tgccacggaa attccggttg agcagcaggg
      781 ccagccacaa cccgagggcc agtttgaaaa ccgttgtgac gagcgtgtag aggcaggtgt
      841 tccacaccgc gacgtgaaaa atatcgtcgc tccagatttt ggtaaaattg gccatgccga
      901 caaaatggcc gggaacgccg acccttgtgt cagtcaccgc cagaagaatg ccgttgacga
      961 agggataggc gataaagagc gcgagcagta ccactgtcgg cagcatcaga cagagcgcca
     1021 gcttgcgctc gtcctcgagc ataagggtga tgggcccgcg ctttggcgcc gggacgtact
     1081 cttgtcgaaa cgtaacggat gctacggacg catcggacgg catcagcgct tcctccccca
     1141 ctgactcctt ggcggcgacg cggggcgaca ccgtggaacc ttatcgacag gaatattagg
     1201 gacaacggag gggatcgcac aaggggcggc aaattgggcg acccttttga gggttgggtg
     1261 atgaccgcca ttcggcacgc cggtcgcgtc cgccgcaccc ctcttattgc gctcgctatg
     1321 cgattgctca aatactggcg gcgcgacgcc ctcggagatc aaagcgacag ccccgcccac
     1381 agacgaccgc gcggcacccg agggccggtt ggagacccat aacccagacc catggaggaa
     1441 gagcaatgtc attctaccga ggcataacct gcgagaacgt gaccatcacc ggtgacaagg
     1501 gaacgcaaat cacggcttac accgccaaac ccgccggtcc cggcccgttt ccgggcgtcg
     1561 tgctgatcca ccatctgcca ggctggagcg aactctacat cgagacgaca cgacgctttg
     1621 cacatcacgg ctatatggcg atctgcgcca acctgtatca ccgcgagggc ggcagcgatg
     1681 ccaacccgga cgacgtcgcc gccaaggtgc gcgccgaggg cggcatcgcc gactctcaga
     1741 tggtcggcga caccgaaggc gcggtgaagt ggatgcgcgc gcagccgaat cacaacggca
     1801 aggtcgggct gatcggttcc tgctcgggcg gccgacacgc cttcatctac gcctgccaga
     1861 aaaaagacat cgacgcctgc gtcgagcagt ggggcggccg cgtggtgatg ggcaaggagg
     1921 aactcaacgc caagacaccg gttgcgccga tcgacatgac caaagacctg agttgcccat
     1981 tgctcggcct cttcggcaac gacgatcgcg ctccgagccc cgagcaggtg aaccagcatg
     2041 aggccgaact caaaagactc ggcaaaaact atgagttcca ccgctacgac ggggccgggc
     2101 atggcttctt ctactggcac cgcccgctat accggcccga gcaatgcatg gacggctggg
     2161 acaagatctg ggctttctac ggcaaatatc tggcgaaata ggagatcccg atatgtgcac
     2221 gtcgatcatc gagatcgcac gcgccgaggg catggcgaaa cgcggggacc aatggttccc
     2281 gctgtcgcga tcggtggttg cctacgacca cgcgcgccat gctccccttg gcgatgtcat
     2341 tacgcttgac ttttacaaca ccggccttgg cgccgatgcg cgtgcggcgg tcgagctgac
     2401 actggaaagc gccaaggaat tgcgcgccgc tctcgaccgg gcaatcgctg cagctgatta
     2461 cgaggaggca gaagtacggg gcaagggcgc cgtgctgaac ctcgtgaaag ccgcgtaacg
     2521 cgatacctgc tattgtttcg ggcgggctgg ggttatggca cggacatgca ccgtggaacc
     2581 ggacctccgt ccgcccgagc gcggtattgt cacagggcaa cgctgtgcga ggttatcata
     2641 ccgcgtcgga atcagccatg atgatttcag actcgaaaat attatcgcgg tccatatgtt
     2701 gctcaacact gcgcctgaaa caggaaccac cggcggcgga ggttatcggt gccgccgtgg
     2761 ccagccgtac gcggggtgtg gcaggtgggg cgtggagaac ccggcggagt ccgtctacaa
     2821 taacgattga accatgtaag ggggcggtta tggcattgct catcgttgat ctcgacaaac
     2881 gtatcggcaa cgccacggca tggcgcgaca cgttccggga acagcttcca gacctggaaa
     2941 tccgcatttg gcctgacgcg ggaagcctcg cggatatcga gtatctcgcc ttcatgcatc
     3001 ccgatttcga ttcacttccc gcgtttccga atttgaaagc catgttcagc cgctccgcgg
     3061 gggtcgaatc cttcatcgac catccaaagt tgccgaaggc ggcgctatgc aaggtcgagc
     3121 cgccaggcgg tgatcccatg atgacggaat acgtcgtcat gcatgtgctt cgctttcatc
     3181 gcgacatgcc tggctatcag gcagctcagg ccaggcggga gtggcgccgt acgacgattg
     3241 tccgacccga acaaaggcgt gtcggattcc tcggcttcgg tatgatggcg caagcgccgg
     3301 cgcttgtgtt gaagtcgctc gggttcaagg tttcggcctg ggttcgaaac ccaagagcgg
     3361 acagcgatgt tccgatcttt cacggtcctc agcagcttga accatttctt gcacagaccg
     3421 acatcgccgt ctgcctgttg ccgctcacga aggaaaccga gggcatattc tgcgcccgca
     3481 ccttcgccat gatgccacgc ggggcgatgc tggtgaatgt cgggcgcggc aaacacgtgg
     3541 tggaaaagga tctgatcgac gccctcgatt cggggcagtt gtcatacgcc gcgttggacg
     3601 cgctgttccc cgagccgcta ccgccaacaa gcccgctttg gctgcatcct aaagttaccg
     3661 tgatgccgca cgtggcacgg cgaccgactg ttgctcagat cgtgacggag atcgctgcga
     3721 atatccgaag catccaggcc ggcgcgcggc ttctgcagga agtcgacatc acgaccggat
     3781 attagcccca cttgcacggg ccttgcctcg gcccggagtt tgcgtttgat agcggacaat
     3841 ccgttctagg aacccatcac cagcaccaga ggaacgacca tgcgacccaa caaaatcaaa
     3901 cagatgtggc gtgacggtca gtgcgtgacc ctgggctggc tctccgtggc ccatgggatc
     3961 acggccgagg tgatgtcgcg tcagggcttt gatgccctgt gcatcgacat gcagcacggc
     4021 acctcggaaa tcagtgacct gttgcccatg ctgcaggcgg tatcgcagac tgataccgtg
     4081 ccggtagtgc gggtcgcatg gaacgagccg gcggccatca tgaaggcgct ggatcttggc
     4141 gcctatggca tcatcgtgcc gctgatcaat accgccgcgg aagcggcgat ggcggtggcc
     4201 gcgtgtcgct atccgccggt cggcatgcgc tcgaacgggc cggtgcgggc ggtgcactat
     4261 ggtggcgccg actacgtggc caatgccaac gatgagatcg tcatcatggc gatgatcgag
     4321 acgaaggagg gtctggccaa cctcgatgcc atctgcgcca cgcctgggct tgacgcggtc
     4381 tatatcgggc cggccgattt gtcgtttgca ctgggtctgg cgccgcgcgg tgataaccct
     4441 gacccgctgc atgtggctac ctgcgacaag atcctggcgg cagcgcataa gcacggcatc
     4501 aagtgcgtga tgcattgtgc aagtgcggcg tttgcggcgg gcgcagtgaa gcgaggcttc
     4561 gatatggtga tgctgacgtc cgatctgtcg tgcatggtcg caggcgcacg ggcgcaactg
     4621 gacgaactcc ggtccaaaac agcctgaaat cggcctcatc gtcgcgatcg gggaacggtc
     4681 ggcgcgaatg gcgccgcccg tcccggcgtc atcccgccat acgacggatg acatcggcga
     4741 caagctgctt aagcgacgcc aacgacgcaa aatccatgac catcgcaacg tagccgacga
     4801 cctgacggcc cttgaagctg aagttgatgt gcacgaacag cacgacatcc tcagccagcg
     4861 acacactcag gtcgaacagg ccatcgctgg tgcctcgcac gatctctggc agcgacatcg
     4921 tcaggctgcg ctgcaataaa ttggcgaccg tcgcaatgca ggcgttcagg atgatattgc
     4981 cgatttccgc caacgcctcg tgttccagtt cgaggatgtc ctccagcgac agttcttcgc
     5041 cggccaccgc gcgcaccagt tccaggctgt tcttctccgg aaagatcagc agggcacgtc
     5101 cggacacgtc gccgtggaac gcctggcgca ccgcgacaag cagatccagg cgcgaagcgc
     5161 tgatcaactc ggccgcccga gaccgcgata caagcatcac cgagggcacc gaaagcagca
     5221 cctgctcgcc gaccatggtg ccaagactcg cagccgcacg gctgacgccg atgttgacga
     5281 gttcacccaa cgcatccagt tccaactcac tcagagtgaa gcctggctcg ctggcgggtt
     5341 cggtcacggc cgtgacgatc cgatcatctc gcgaatcgta accgcgatgg cctccagtga
     5401 aaagggtttg gtgaccatct tcatgccggg tgccaggaaa tcgccccggt tggtggcgtg
     5461 ttcggcatag ccggtcacga acagcacctt aagccgcggc cgatgccccc tgccgatttc
     5521 agcaagctgg cggccattga ccccaggcag gccaacgtcg gtgatcatca gatcgagccg
     5581 cacgttcgaa gcaagaatgg gcatggccat ttctgcgtct ttcgcctcga tcagcgcata
     5641 gccaagctcg cgcagcactt cggcaatgag cagtcgtacc gaaggctcgt cttcgaccag
     5701 caatacggtc tcgccggttc cctcgggaac cgccgtgtca ggggacggcg tcgctttgca
     5761 ttttgccgcc ccgcggtcat cgcgcggaaa atacagccaa accgtcgtcc ccttcccgac
     5821 ctcgctttcg acacggacat gcccgcccga ttggcgtgcg aacccataga ccatggacaa
     5881 ccccagaccg gttccctgac cgatcggctt ggtcgtgaag aatggatcga acactttggc
     5941 cacggtctct ggcggcatcc ccgtcccggt atcggcgacc gaaatcaccg tgtattcgcc
     6001 cggctcagcc tcatcctgca ttgaggtcgc accaggctcg acgacggcgc ttgcagtttc
     6061 aatccgcagc gtgccgccgt gcggcatggc gtcccggctg ttgatcacca gattgagcag
     6121 cgcattttcg agttggttgg cgtcggtcac cgccggtcgc aacccgtcag ccaaatcgaa
     6181 ctgcaggata atccgctcgc cgatacttcg gcgcaacaga tcctccattt cgagaatcaa
     6241 ctgattgaca tcgaccggtc cccgatcgag cggctggcgg cgagcgaacg ccaacaggcg
     6301 gtgcgtcagg gccgccgctc ggtgcgcaga cgtcgccgca gcgtccagaa acgtatcgat
     6361 attttcatat cgcccggccg cgatccgccg cttcgcgagg ttgatccc
//
LOCUS       DATAVD010001305         1685 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_497058, whole genome shotgun sequence.
ACCESSION   DATAVD010001305 DATAVD010000000
VERSION     DATAVD010001305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1685
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_497058"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(154..1527)
                     /locus_tag="VHX39_24830"
     CDS             complement(154..1527)
                     /locus_tag="VHX39_24830"
                     /inference="COORDINATES: protein motif:HMM:NF033517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HEX3994410.1"
                     /translation="MDAEQGQNDCGECAQLRQELQALREQVAKLTAALEEERRRGKRQ
                     AAPFSKGAPVTEPKPPGRKSGKRHGPHAHRSVPPRIDETYDAPLPQTCPHCASEQVSE
                     THVAVQYQTEIPCTVLYRRFDVHVGTCNDCGHMVAGRHALQTSSARGAAASQLGPRVH
                     ALLAVLNKELGLSHGKSVKLLQTLFPELYLARATSIRSMLRTSERCAPAYEQLRIDLR
                     GVAEVAPDETGWRVGGRLAWLHAFVSQRVTCYVIDPTRSHKPAEQLLGLDWSGTLVHD
                     GWSVYDRFTRAFHQQCLRHLQRRCLELLETAVRGARRLPHAVLALIDRAFAWRRAWRG
                     HRLSGDDLAERGLGLACELERLASGRFTHEPNRRLAGHLLNHGMQWFWFLIDPTIQAT
                     NHWAEQAIRPAVVNRKVWGGNRTWPGARGQSILMSVIRTCRQRAAEPLAYLINVLCRP
                     QPQFIPA"
BASE COUNT          329 a          520 c          508 g          328 t
ORIGIN      
        1 aatcagcctc tctcaatccg cacgacaaaa agttataccc ttttgcgtgg gtctcgagac
       61 gaggaaacgt cggaaaccca gagtctactg gggctgaact cgccggaact ctatttgtcg
      121 cgatagcttc gccgcaggta attgattacc gcttcaggcc gggatgaatt ggggctgggg
      181 tcggcagagc acgttgatca gataggccag cggctcggcg gcgcgttggc ggcaagtgcg
      241 aatcacggac atcaggatgc tttggcccct ggcgcccggc caggtacggt tgccgcccca
      301 gaccttgcga ttcaccacgg ccggacgaat cgcttgctcg gcccaatggt ttgtcgcttg
      361 aatcgttgga tcgatcagga accagaacca ctgcatcccg tggttcaaga gatggcctgc
      421 caagcggcga ttcggttcgt gcgtgaagcg gcctgaggcc aaccgttcca attcgcaggc
      481 caagcccaag ccacgctcgg ccaagtcatc accgctgagg cgatgtcccc gccatgcccg
      541 tcgccaagcg aaggcgcgat cgatcaatgc caagacggca tgcggcaaac gcctggcgcc
      601 acgcactgcc gtttctagca gttctaggca acgacgttgc aagtgccgta ggcactgctg
      661 atgaaaggcc cgtgtgaagc ggtcgtacac gctccagccg tcgtgtacca gcgtgcccga
      721 ccagtcgagc cccaacagtt gttcggccgg tttgtggctc cgcgtgggat cgatcacata
      781 acacgtcaca cgttgactga cgaaggcgtg caaccaggcc aggcgtccac cgacacgcca
      841 gcccgtttca tcgggcgcga cctccgccac gccgcgcaag tcgatgcgca gttgttcata
      901 agccggagca caacgctcgg acgtccgcag catcgaacgg atgctggtgg ctcgggcgag
      961 gtacagttcg gggaacagcg tctgcagcag cttcacgctc ttgccgtgcg agaggcccaa
     1021 ctctttgttg agaacggcca gcaaagcatg cactcgggga ccgagttgac tggccgcggc
     1081 accgcgggcg gaactggttt gcaaggcgtg acggcctgcg accatgtggc cacaatcgtt
     1141 gcaggtaccg acatgcacgt cgaagcggcg gtagaggacc gtgcacggga tctcggtctg
     1201 gtactgcaca gccacgtgcg tttcgctgac ttgctcgctc gcgcagtgcg ggcaggtctg
     1261 cggtagcggc gcgtcgtacg tctcgtcgat ccgtggcggc acgctgcgat gcgcgtgcgg
     1321 accatgccgc ttgcccgact tgcgaccagg cggcttcggt tcggtgactg gtgccccttt
     1381 cgagaacggc gccgcctgtc gtttgccacg ccggcgctct tcttccaacg ccgcagtcag
     1441 cttggcgacc tgttcacgca atgcctgcaa ttcctgccgc agctgggcac actcaccaca
     1501 atcgttttga ccttgctccg cgtccatgac cgcggagatt accaaccttc aacagatggc
     1561 gcaagttcaa gtcggtaatc aattacgtca gttggtactg tccattggta atctgcacat
     1621 tcgcagtcac gacgatgaca tagccgttct tatcgacgtg gaaagatacg atcaaacttc
     1681 ctgag
//
LOCUS       DATAVD010001306         5419 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3100946, whole genome shotgun sequence.
ACCESSION   DATAVD010001306 DATAVD010000000
VERSION     DATAVD010001306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5419
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3100946"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..451)
                     /locus_tag="VHX39_24835"
     CDS             complement(<1..451)
                     /locus_tag="VHX39_24835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GreA/GreB family elongation factor"
                     /protein_id="HEX3994411.1"
                     /translation="MQTTTIIDDEDDGPPRLTGGRFYMTPGGHATLTAELHQLRAVER
                     PRIVDIVSWAAGNGDRSENGDYLYGKRRLREIDRRMRFLMHRLRHAEVIDPGQQSNRT
                     QVFFGASVTYVNERDEQLTVTIVGIDEADMAMGKISIASPVALALLRA"
     gene            578..1012
                     /locus_tag="VHX39_24840"
     CDS             578..1012
                     /locus_tag="VHX39_24840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994412.1"
                     /translation="MGAFVNASFHTTRGGKPFLIRPGRRLLSLAAVVCGALPLLAGRP
                     AALEDWCSHVARIDILTQLLAGNGYWAQFYPINTFLLPNISVDLSILALHAIGLPVAV
                     AAQVTLLASYFLFVGAASALASMSVFVSWGERFVETPELAWR"
     gene            complement(1018..1221)
                     /locus_tag="VHX39_24845"
     CDS             complement(1018..1221)
                     /locus_tag="VHX39_24845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994413.1"
                     /translation="MSKTDITPEFQRGWQAALLAARDWHESQAKKAIVQSRRSRFPKN
                     LEREAEVHQKSAELIVTLGPEDV"
     gene            1331..1600
                     /locus_tag="VHX39_24850"
     CDS             1331..1600
                     /locus_tag="VHX39_24850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994414.1"
                     /translation="MGNTHRVYAMAVIQVGTIDTETGSEVPGTRLRTGSAQAAVDHAC
                     DLNARHLPPRYRARILYWGEFVDPAFAELSQLAQQRGLEVEIGGA"
     gene            1652..2503
                     /locus_tag="VHX39_24855"
     CDS             1652..2503
                     /locus_tag="VHX39_24855"
                     /inference="COORDINATES: protein motif:HMM:NF006093.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HEX3994415.1"
                     /translation="MTLIAPVPRLCLPEIMRKLHAAQFSALPYLASSAAAAHDPAVAQ
                     YSEPIMTIDAHLAKAFDGVSTATITTVLLKKGLRNVWMRGTKPIRSPQARQIGRAFTL
                     RFVPAREDLATPASWSNPISTRAAIEAMPHGCIAVVDAMGVTDAGIFGDILCARMAKR
                     GVSALVTDGVVRDVAGVLGTGLPVWCNGVAAPASVAGLTFVGWGEPIGCGGVAIFPDD
                     LIMVDDDGAVVIPAALVDAVAAEAAEQERQEAWIMSEVDKGAALPGLYPPNAENKARY
                     EAWAKGQ"
     gene            2523..3659
                     /locus_tag="VHX39_24860"
     CDS             2523..3659
                     /locus_tag="VHX39_24860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3994416.1"
                     /translation="MPDSLPVHGDTIIVDMIRKFAQERLAPLAAEREKLGRIEPEIIR
                     ELGELGVFGATTPAEWDGSEIDPVTYALLLEEIAAGDGSVSTMVSVHNSPTCIVIANS
                     GTDAQKDRWLRKLATGEAVGSFGLTEPQAGSDASNLRTRAVKQGDRYIVNGSKQFISN
                     AMHPGSLVFFAVTDPAAGKRGISCFVIDKSHPGFSVVRTEAKLGQKASDTCALSFDNV
                     EIPEDQRIGAEGEGYKIALSTLESGRIGIAAQSVGMARAALDYAIDYARERTAFGGKI
                     IDFQAVGFRLAEAKTKLEAARQLTLHAARLKAEGLPSLEAACMAKLFASETAEAVCTA
                     AIQTLGGYGFLADYPVERIYRDVRVCQIYEGTSDVQKLILQRML"
     gene            complement(3835..4827)
                     /locus_tag="VHX39_24865"
     CDS             complement(3835..4827)
                     /locus_tag="VHX39_24865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994417.1"
                     /translation="MKWYFLTIGSLSVLCYIPDALSFGLIFFVLPGIIMWASVTLLFY
                     SAPGVAAYRLASSSLGINRWTAVAMALVCLAIIAVIPGIVSRHELNSFSQAALASDFS
                     KPAAVQPRSIELPVNSAWQRPVNEKHGDWPDAKVARAKCSGLCQELLLSGIDSVITGV
                     AIDSARDENHRLIYPTQFWRFRVEHLATCPITLSQVQIDFGADRCLTEAKVDTSDADV
                     ALAIRNGDATDRTTQVRCKPGNQIALWLTQTNSSIEVQERIDGKPETVEKRTSLTGWL
                     TPIPFFVGTQSCAQLDVEPYFATVKVQVRTADLLEIIQRRYGIVTTASPRDVGL"
BASE COUNT         1061 a         1619 c         1635 g         1104 t
ORIGIN      
        1 gggcgcgcaa caaagccagc gcgaccggcg aggcaatact gattttgccc attgccatat
       61 ctgcctcatc aatccccacg atggttacgg tcagttgctc atcccgttca ttgacgtagg
      121 tcactgaggc gccgaaaaaa acctgagtgc gattgctttg ttggcctggg tcgatgacct
      181 cggcatggcg caggcgatgc atcagaaagc gcatccgccg gtcgatttca cgcagccggc
      241 gcttgccgta caggtagtcg ccgttttccg accgatcccc gttgccggca gcccaggaaa
      301 cgatgtcgac gatgcgggga cgttcgacgg cgcgaagttg gtgcagttcc gcggttagtg
      361 ttgcgtggcc gccgggggtc atataaaagc ggccgcccgt caggcgaggc gggccgtcat
      421 cctcatcgtc gataatcgtt gtcgtttgca tccgagggat gatacagcat ggcgtccagt
      481 ccagaaagaa aaacccgacc tggacatagc tggatggaat tcgctaacgc atgattaacg
      541 cgagccccgg catgcacgga aatcgcgcgg caaccgggtg ggcgccttcg ttaacgcttc
      601 gtttcataca acgcgtggcg gcaaaccctt tttgatccgg cctgggcgaa gactgctgtc
      661 tcttgcagcg gtggtttgtg gcgctctgcc gctgttggct ggccggcccg cggcgttgga
      721 ggattggtgc agtcatgtcg cacgcatcga tattttgacg caattgctgg cggggaatgg
      781 ttattgggcg cagttctacc cgatcaatac gttcttgctg ccgaatattt ccgttgatct
      841 cagcatcctt gctttgcatg cgatcggtct gccggttgct gtggcggctc aggtcacgct
      901 gctcgccagt tattttttgt tcgttggtgc agcctcggca ttggcctcca tgtcggtttt
      961 tgtgagttgg ggtgagcggt tcgtggaaac gccagagctg gcctggcgat aaccgggtca
     1021 gacgtcctcg ggaccgagcg tgacgatcag ttcggctgac ttctgatgca cctcggcctc
     1081 ccgttccaaa ttcttcggga accggctgcg ccttgactga acgatggcct tcttcgcctg
     1141 cgattcatgc cagtctcggg ccgcaagaag cgccgcctgc cagccacgtt gaaactcggg
     1201 cgtgatgtcg gttttgctca tgacaaaatg atagagcgat gcggcacttt tgcaatctcg
     1261 cgtggtgtgc ggtcaggttc gtgaccccgg cggcgctgac ctctgggcgt tcgtggtcct
     1321 ggcggctact atgggaaata cccacagagt ttacgccatg gctgtcattc aggttggaac
     1381 gatcgatacc gagaccggct ccgaggttcc gggtacgcgg ttgcgcacgg ggtcggcgca
     1441 ggctgcggtc gatcatgcgt gcgatctgaa cgcgaggcat ttgccgcctc ggtaccgggc
     1501 aagaattctc tattggggcg aattcgtcga tcccgcgttc gcagaattat cgcaactcgc
     1561 tcagcagcgg ggactcgagg tggagatcgg cggcgcttag acaataagcg aatgcgacgg
     1621 gatccgcccg ccaaatcgtt gcatatcgga tatgaccctg attgcgcccg ttccgcggct
     1681 ttgcctgccg gagatcatgc gcaagctgca tgccgcgcag ttttccgcgc tgccctatct
     1741 ggcctcgagt gccgccgcgg cgcatgatcc agccgtagcc cagtactcgg aaccgatcat
     1801 gaccatcgat gcccacctcg ccaaagcctt cgacggcgtc tcgaccgcca ccatcaccac
     1861 ggtccttttg aagaaaggac tgcgaaacgt ctggatgcgc ggcaccaaac cgatccgctc
     1921 gccacaagcc cggcagatcg gccgcgcctt caccctccgt tttgtcccgg cccgggaaga
     1981 cctcgccact ccggcctcct ggtccaaccc gatctccacc cgcgccgcga tcgaggccat
     2041 gccgcacggt tgcattgccg tggtcgacgc catgggcgtc accgatgccg gcatttttgg
     2101 tgacatcctc tgcgcccgca tggcgaaacg aggcgtctcc gccctggtca ccgacggcgt
     2161 ggtgcgcgat gtcgccggcg tccttggtac tgggctgccg gtctggtgta acggcgttgc
     2221 cgctccggcc tcggtcgccg gcctgacgtt cgtcggttgg ggcgagccga tcggctgcgg
     2281 cggcgtcgcg atcttcccgg acgacctgat catggtcgat gatgacgggg ccgtcgtgat
     2341 ccccgccgct ttggtcgatg cggttgccgc cgaagccgcc gaacaggaac gccaggaagc
     2401 gtggatcatg tccgaggtcg acaaaggcgc cgcgctcccc ggcctctacc cgcccaacgc
     2461 cgaaaacaaa gcccgctacg aagcgtgggc caagggacag taaacgttca aggagcctcg
     2521 caatgcccga cagtcttccc gtgcacggcg acaccatcat cgtcgacatg atccgcaaat
     2581 tcgcccagga gcggctggcg ccactggcgg cggagcggga gaagttggga cggatcgaac
     2641 ccgaaatcat ccgcgaactc ggcgaactgg gcgtgtttgg tgccacgacg ccggcggaat
     2701 gggatggttc cgaaatcgat ccggtcacct acgcgctgtt gctggaggaa atcgctgccg
     2761 gggacggctc ggtttcgacc atggtatcgg tgcacaattc gccgacctgc atcgtgatcg
     2821 ccaactccgg caccgacgcg caaaaggatc gttggctgcg caagctggcg accggcgagg
     2881 cggtcggttc gttcggtctg accgagcctc aggccggttc cgacgcatcc aatctgcgca
     2941 cgcgggctgt gaaacagggc gatcgctata ttgtcaacgg atcaaaacaa ttcatcagta
     3001 atgcaatgca cccgggcagc ctggtgtttt tcgcggtaac cgatccagcg gccggcaaac
     3061 gcggcatttc ttgtttcgtg atcgacaaga gccatcccgg attctcggtg gtccgcaccg
     3121 aggcgaagct tggtcaaaaa gcctccgata cgtgcgcgct gagttttgac aatgtggaga
     3181 ttccggagga tcaacggatc ggtgccgaag gtgagggcta taagatcgcc ctttccaccc
     3241 tggaaagcgg ccgcatcggc atcgctgcgc agagcgttgg catggcgcgc gcagcgttgg
     3301 actacgcgat cgattacgcc cgcgaacgga ctgcgttcgg tggcaagatc atcgatttcc
     3361 aggcggttgg gttccgcctc gccgaggcga agacgaagct ggaagcggcg cggcaattga
     3421 ccctgcatgc cgcgcggttg aaggcagaag gcctgccgtc gctggaggca gcgtgcatgg
     3481 ccaaactgtt tgcctcggag accgccgagg ccgtctgcac cgccgcgatc cagaccttgg
     3541 gcggctacgg cttcctggcg gactatccgg tggagcggat ctatcgcgat gtgcgcgtgt
     3601 gccaaattta tgaaggcacg tcggatgtgc agaagctgat cttgcaacga atgctgtgac
     3661 cgcgcgcatg gttcactcat aacgacgacc ggcaggaaca acctgcctcg gccatggtca
     3721 cccacaagaa ttgtgcgaaa cggtacgcca ggatcatccc aaccggaaca aacggggtgg
     3781 gcgtaaccgt tgtcaccagc cgcgtgatcg gttgctcgtg cacctgccag cggatcataa
     3841 cccgacatcg cgcggcgagg cagtcgtcac gataccatac cgacgttgga ttatttccaa
     3901 caaatccgct gtccgaacct gcactttgac ggtggcaaag tagggctcaa catcaagttg
     3961 tgcgcaactt tgcgtgccaa caaagaatgg aattggagtt aaccagcctg tgagactcgt
     4021 tcgcttttcg actgtctccg gctttccatc aatgcgctcc tggacttcga tcgatgagtt
     4081 ggtctgggtc agccaaagcg ctatctgatt tcctggtttg catctcacct gcgttgtcct
     4141 gtcggttgcg tcgccgtttc gaatcgccag ggccacatct gcatcggagg tgtcaacttt
     4201 tgcctcagtc aggcagcggt ccgctccgaa atcaatctgg acctgagata atgttatcgg
     4261 gcaggtagca aggtgttcga cacgaaaacg ccagaattgc gtcggataaa tgagcctgtg
     4321 attctcgtcg cgcgctgaat cgattgcgac gccggtaatc acggaatcaa taccggagag
     4381 caacaattct tggcacaggc cggaacattt cgcgcgagcc accttggcat caggccagtc
     4441 gccatgtttt tcgttgaccg ggcgttgcca cgcgctgttc accggtagtt cgatagagcg
     4501 aggctgcacc gcggcgggtt tgctgaaatc ggaagccagg gccgcctgac tgaagctatt
     4561 gagttcgtgc ctcgatacga tacccgggat cactgcgatg atcgcaaggc aaaccagcgc
     4621 cattgcgacg gctgtccagc gattgatgcc taatgatgac gaggccagac gataagctgc
     4681 gacacccggc gcagaataaa acagcaatgt gaccgaggcc cacataatta ttccgggcag
     4741 gacaaaaaat attaacccga atgacagggc atccggaata tagcaaagca ccgacaatga
     4801 gccgatggta aggaaatacc acttcatgcg tcatttcggc tttcagtgtt ggcgtggagc
     4861 gaacagccgg tgtggacgaa atcaaggata acaggaccct ccgagaccgt gcaacgccac
     4921 atgataccgt tggcctactg acgtcactac tactgtaccc atgtcgacgt taaaccttaa
     4981 ttaacctcgc tttgataaat cgtgtatcgg caaaccaatc cggtgcacga ccatggtcaa
     5041 atacgcgaca gttcttttcg ttgtggcatt gcagttcacg acagcgagtt tcgcccaaca
     5101 accgccgttc cgagggcaca atggcccgcc tctgcctggg cacccagtgc ctgggtatcc
     5161 gcacgattat cgctaccctc aacggggcgg catgccgggc cttgtccccg gactccttct
     5221 gggccttggc gtgggcatga tcccgttcct ccaacagccc gcaccggcgc gggctgcgcc
     5281 gggtggctat ccgcaaccca atgcctcgaa cggtgcaccg ggacggaccg ggacacctcc
     5341 cggaaatccc tgatcgcgac gtgcatcgcc acgggcatcg cggcggatca ggcgccctcg
     5401 cgccgccacg ccaggacca
//
LOCUS       DATAVD010001307        13800 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2172178, whole genome shotgun sequence.
ACCESSION   DATAVD010001307 DATAVD010000000
VERSION     DATAVD010001307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 13800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13800
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2172178"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..713
                     /locus_tag="VHX39_24870"
     CDS             <1..713
                     /locus_tag="VHX39_24870"
                     /inference="COORDINATES: protein motif:HMM:NF024829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEX3994418.1"
                     /translation="MQRNLDSSIQTNNSAQRDLAALIAERDGYVQSWHADIAEKLAEA
                     AAKLSDARESFNKAQLKRQLVELRADQDSTVLTVARGVSPGAVLTAGQQFLSLVPSNA
                     PLEIEANIPGSEDGYVHVGDSVAIKFDTFPYTQYGMAKGVVRIISPDSFNAQDEQRNP
                     SGSVPVPSAGAAGASSAVWYRARITLDEINLHNTPAGFHLIPGMPVNADVLVGKRTVM
                     AYFLGRAMPLVREGMREP"
     gene            910..2676
                     /locus_tag="VHX39_24875"
     CDS             910..2676
                     /locus_tag="VHX39_24875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3994419.1"
                     /translation="MDLLDLILSPFSASAALRRAVRLTDRGDRRAAFPLLSRAAQAGI
                     AEAEFRIGRCYLEGAGVPPSRSNGVRWLEKAATQGYVEAQALLATLCLNGLGPEQGGS
                     GPGSAVLFGAQTTAGPNYETALHWARLAAQGGSAEGQAVLGFILGSGPEATRDQAASD
                     RWYKRSAEAGCPQGQLGYALVLARNSGSPKVQEELVRHLRGAAEKGLATALFLYGMMH
                     DRGVGVPQDQAAAAQYFAQAAAKGHVSAQARWGFAQLRGIGVEVNATDGESWLRRAAL
                     AGDPEAAAVVGDIYAKGGPLPPNYAEAAMWFRRAVEHKHRGAARALAMLHLTGAGVPR
                     DQGEAARLFRIAAEAGDPSSHADLGNLLLKGHGDIQDSIHTREWFEQAAESGDLIAAF
                     NFGVCLAEGVGIDRDDQKAAQWLRRAADGVVNAQYWYGRMLVEGRGVDKNAEEGRAWI
                     GRAAEVGMIEAQVMLADMLLNGTGGPKDHKAALALFTKAAEAGHVGAMFATGAMLGGG
                     HDVPVDRSQAQIWYRSAAERGHPYAQMMLGRFLMRNVAGEQNPTEARFWLERAAAQGL
                     QEAKNDLAGLPPLPSETLDEAV"
     gene            2705..4813
                     /locus_tag="VHX39_24880"
     CDS             2705..4813
                     /locus_tag="VHX39_24880"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3994420.1"
                     /translation="MNDRLDESARQTQLVKDAFERGQAALVAGDKIDALRWLERAHRL
                     APRDGTITLVLASAAIGHDNPKAAALFEAVLATEDVRDAWYGLASARLLMGDFSAACD
                     AVANVLSRYAVWPDIAGLAGQVARATGAAGWCGLAGTGALVVQPGKESIGPVDIRIDG
                     TPLEAPDALMLPGSWPRAQWVTITAGSQRRHLIGSPISLRAIGRIEGQVETFDDGLRG
                     WAWCPGDRETDPILSVGAGRMRREIVATGPAADVRGLAPLARPRSFVVPRDELPNGTG
                     PIRVRGRDGHDLVGSPIARDRRDLVGISHSRAAPSVDAVAGAAAQRRRQRGLARWRDR
                     TTQSVVMVTHNDGGGVERRVQASVASHEAHGRRAIVLRPEISPDGLTSVVATSGSLPD
                     MAFELPRERASLLRLLREMQPVAAELHHFLNHDASLFEIVRALGVPYDAHVHDYAWFC
                     PRIALVGRGDRYCGEPAQPVCQSCLTELGGYLHEDITVAALVDRSASILSGANQIIAP
                     SHDAAARLARHFPGISPIVIPHEDDTALAEPPPVPSVTGTVRVCVAGAIGLHKGFHVL
                     LACALDAKQRDLDVTFVVVGTTIDDQRLMDTGRVFVTGPYQPDEAVALIRAQGAAIAL
                     LPSIWPETWCLGLTELWRAGLRVVAFDIGAPAERIRQTGRGFLLPLHLAPAAINETLL
                     KAARGRSSQSPIHTQSVHNL"
     gene            4916..5941
                     /locus_tag="VHX39_24885"
     CDS             4916..5941
                     /locus_tag="VHX39_24885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994421.1"
                     /translation="MPPAAASAVQTMANVKEAPAASPEPASAPQAPGPQTSAAQAQAA
                     GRVTELRVSANLMTLETGVYCVFPAPGSRSPDPATGLPGVRITRCPGMAGRPEAVSIS
                     TFREDGWLDNTAALVRVSDGPAQVLVTIYQAAGQSAEHAPRLQVLRLAGDPAVAVSEP
                     PVPAPKERDPEVMAHVQGTGDMPGQFGDWIGKRGSGSWIEGFGISDKGPIAPGDMEYQ
                     GVLGRGWLSPWVENGKFCGSRGMALPLLGLNVRLKGAAAKEFTVRYSATFIDGSVVGP
                     IDEGTACEAPGLAAMEALQIELIPRAERSAATRSANDATHDRSAAARPSAPRASTPKS
                     PARSSRH"
     gene            6068..7363
                     /locus_tag="VHX39_24890"
     CDS             6068..7363
                     /locus_tag="VHX39_24890"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003617201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3994422.1"
                     /translation="MKFLFVHQNFPGQFLHLVRHLVAMREHEIVFITEANANAIDGVR
                     KVPYMKPKPASPDTHIAARELDVAVRRAEIVARTATSLKHLGFTPDVIIGHQGWGEML
                     NLPDVYPGVPAIGYMEFYYQTDGADVVFDPEFPIDRADFPRIRAKNAINHLALNLSCY
                     GVTPTKWQLSTYPDWARPRIDLMWEGVNLDLCSPDEKARHAQLKIGDMTIRRNDTLVT
                     YVSRDLEPYRGVHTMIRALPAMFRARKNLKVVMVGGDGVSYGAPAPDGGTWREVFLQE
                     VGDQIDASRIVFPGRIEYTTYLALLRRSDAHVYLTYPFVASWSLREALAMGCAIVGSD
                     TDPVSEFIAHGQNGLLTSFFDPQGLADAVLQVLEDKRLDQKLRTGARHYAERNLAMDD
                     YLRMYTQKIELLTGGLLIAPEPRTRRSVQRSAKERPVNV"
     gene            complement(7419..8180)
                     /locus_tag="VHX39_24895"
     CDS             complement(7419..8180)
                     /locus_tag="VHX39_24895"
                     /inference="COORDINATES: protein motif:HMM:NF024853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEX3994423.1"
                     /translation="MWFPSRTRIRLLSACLPLLGAAFIPAPTWADEFNSAQRAEIIAI
                     IRDAVKHDPSILRDAVIALQADDAEQEKTAVRAAVLAAKDTLVNPNDPVAGNPQGSVT
                     IVEFFDVRCPYCRKLEPEMADFLAADHDVRLVYKDLPILGAPSVLGTKALLAARKQDA
                     YIKLRDALMHMPPEITRATIEAEAKKLGLDSARLLHDMDDPSIQKQIDANLRMAQRLN
                     IQGTPAMIIGNDLLAGAVETSELKEAVAKARSAKD"
     gene            8669..10129
                     /locus_tag="VHX39_24900"
     CDS             8669..10129
                     /locus_tag="VHX39_24900"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX3994424.1"
                     /translation="MPQKLTGFHSWLRPAIRLAAPLALGMLVTGCSVFDSINHTLFGT
                     RSGPAPGQQGYVKGFLGWVVADEPRAALVGKEVLSGGGNAADAAVAVGLSLAVTLPSR
                     AGLGGGGACIAYASDRHLLPRGYPEAITFVSPPVRSVGGGDRPAAVPMLARGMFMLHA
                     RYGKLPIEQLITKAEDLARRGVPASTALTRDLALVAGPLFGDPEARAVFSLGGAPLAE
                     GQRLLQPQLSATLAELRVSGIGDLYQGVLARRIAQVSPSAGVPIGLQDLWFALPSLSS
                     PVIVPVGDDQVAFPPTEGGVGAAAALIALNSQPADFQSAWARSLGAAATWRAGGANLD
                     QVLHGNVAAPATTPLYPASTTFATLDPDGNAVVCALTMNNLFGTGRMVPGFGFLAAAS
                     PATVNPPLLAPGLAWSNDRHAFHAEAGGSGQAGAALAAAVALSNSLRSGYPMTSLVPD
                     PGRANVISCGRYLPGSDSSCGAAADPREAGLAAGGQ"
     gene            10233..11393
                     /locus_tag="VHX39_24905"
     CDS             10233..11393
                     /locus_tag="VHX39_24905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX3994425.1"
                     /translation="MALKIGRGAAAPPFIVMDVIAAANARQAELPAGAPHVIRMEVGQ
                     PGTGAPAGAVEAAQAALRSGNPLGYTEAPGRISLRERIVAHIRDWYGLAVPVARVAVT
                     VGASGAFPLAFLAAFDPGDRVAMAAPFYPPYVNILTALGIQPVILEAGPETRFQPSTA
                     MLERLEPRPDGLVVASPCNPAGTMLHRDELAAIAAWCDGNGVRLISDEIYHGLNYEHP
                     IATAAAFSPNAIVVNSFSKYFSMTGWRIGWMVLPEDLIRPVECLTQNLFISAPYISQV
                     AAEAAFDCHDELRANVARYRRSRDHLLATLPGAGFPHLSPAEGAFYLFADIGDRSNDS
                     VAFCTRMLNEAGVACSPGVDFDRTRGNRFVRFSYCGPEADMRAAAERLKRWQ"
     gene            complement(11419..12288)
                     /locus_tag="VHX39_24910"
     CDS             complement(11419..12288)
                     /locus_tag="VHX39_24910"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HEX3994426.1"
                     /translation="MNERRINLHLVSEATGETLGTLARATTAQFDTAYIITHRWSLIR
                     TSFQLQGVLKGIEAEPGPVLSTLVDQALRGELETMCQRINLPVVNVLDPVMNMLQDYI
                     GEAATHRPGRQYVMNADYFKRIDAMHYVLQHDDGQAQVGLAEADVILVGVSRSSKTPT
                     CFFLANRGIKAANVPLVPQAILPEGLEQAHCPVVGLAIEAQALIDIRRHRLRLIGAGG
                     HTGVIRQSETEYVDEEAVKAELLWARRLCNRHGWPVIDVTRRSIEETSATVLQLMGAW
                     HERRRKQAALAKG"
     gene            12383..13753
                     /locus_tag="VHX39_24915"
     CDS             12383..13753
                     /locus_tag="VHX39_24915"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3994427.1"
                     /translation="MGKPPAKRQIRLNAFDMACVGHIQHGMWTHPRDHSADYTSLDHW
                     VSLARTLERGLFDGLFLADILGVYDVLEGTPDPSLRASVQVPLLDPMALVPAMAHATS
                     HLGFGVTCNLAYEPPYLFARRMATLDHLSGGRIGWNIVTGYLDSAARAMGLREQMAHD
                     DRYDLAEEYMQVVYALWEGGWRDDAVVRDRVRRVYTEPSRVRPIHHAGKQYQLDALPL
                     WEPSPQRTPVLYQAGASDRGRIFAGRHAECVFVNGTNLTHAAKVTADLRARAGSRPIQ
                     VFAGATVVTAATEAEAHDRLEEYRRHTNTEGALAHAAASLGIDFSQFDMDEPVDAGDS
                     QAIQSNVASIAASLGAGWTKRQLIDRFILGSRQTPIVGSPSQVADALQGWVADADVDG
                     FNLSRTVIPECLEDFIDLIVPALQDRGAFKTAYSLGTYRQKLFGAGDRLPDDHPAARE
                     RWVDPL"
BASE COUNT         2371 a         4162 c         4559 g         2708 t
ORIGIN      
        1 aaatgcagcg gaacctcgat tcctccatcc agaccaacaa ttctgcgcaa cgcgacctcg
       61 cggctttgat cgccgaacgg gacgggtatg tccaaagctg gcatgccgat attgcggaaa
      121 aacttgccga ggcggcggcg aagctgtcgg atgcgcggga atccttcaac aaagcgcagc
      181 tgaagcggca gttggtcgag ctgcgggccg accaggattc gacggtgtta acggtagcca
      241 gaggggtctc gccgggggcg gtgctgacag ccggccagca gttcctgagt ctcgtgccgt
      301 cgaatgcccc gctggagatc gaagcgaata ttcccggtag cgaggatggc tacgttcatg
      361 ttggcgactc ggtcgctatc aagttcgata ccttccctta cacgcaatac ggtatggcga
      421 agggagtggt gcgaattatc agccctgaca gtttcaacgc acaggacgag cagaggaacc
      481 catccgggtc agtcccggtg ccgtcagctg gcgccgccgg cgcaagctcc gccgtctggt
      541 atcgtgcgcg cataacgctg gacgagatca atctgcacaa tacgcccgcg gggttccatc
      601 tcatccctgg tatgcctgtc aacgctgacg ttttggtcgg caagcggacg gtcatggcct
      661 atttccttgg ccgcgcgatg ccacttgtgc gtgagggtat gcgggagccg tgatcgtcgc
      721 ctcggctcgt tcgccaaaca gcaagtgggg tcacgcgttc gagcctgtcg atggccaaag
      781 gacctgcctc ggcataacgg tgcagggtgg cgcatgtccg gtgcctggca taacctgatg
      841 ggagggccgt tgagcctgac cgcgaaggcc tggaaactgc caagactgga tcttggtcgt
      901 gagggttgaa tggacctgct ggatctaatc ctgtcgccat tctccgcctc tgccgcgttg
      961 cggcgggcgg tgcgactgac ggaccggggc gaccggcgcg cggcgtttcc gctactcagc
     1021 cgggccgcgc aggccgggat cgccgaagcg gaattccgga ttggccgctg ctatctggaa
     1081 ggcgccggtg ttccacccag tcgcagcaac ggcgtgcgct ggctcgagaa agcggcaacc
     1141 caaggttatg tcgaggccca ggcgttgctc gctaccctgt gcctgaacgg actgggaccc
     1201 gagcagggtg gcagcggtcc gggctcggcg gttctgttcg gtgctcagac gaccgcaggt
     1261 ccgaactatg aaacggctct ccactgggct cggcttgctg cccagggagg ttcggcagaa
     1321 ggccaggcgg tactgggttt tatccttggc tccggaccgg aggcgacgcg cgaccaggcg
     1381 gcgtccgacc ggtggtacaa acgctcggcc gaggccggat gtccgcaagg tcagctcggc
     1441 tatgcccttg tgctggctcg caactcaggt tcgcctaagg tgcaggaaga actcgtcagg
     1501 catctgcgcg gggcggcgga aaaagggctg gccactgcgc tgtttctgta tggcatgatg
     1561 catgaccgcg gcgttggtgt gccgcaggat caggcggccg cagcgcaata ttttgcccag
     1621 gctgccgcaa agggccatgt ttcggcccag gcgcgctggg gtttcgcgca attgcgcggt
     1681 atcggcgtgg aggtgaacgc aaccgacggc gagtcctggc tgcgccgcgc cgctctcgcc
     1741 ggcgatcctg aagcagcggc tgtggtaggg gatatttacg ccaaaggtgg accgctgccg
     1801 ccgaactatg cggaagcagc gatgtggttc cgccgggcgg tcgagcacaa acatcgcggt
     1861 gcggcccgtg cgttggccat gctgcatttg accggcgccg gcgtgccacg cgaccagggt
     1921 gaggcagctc ggttattccg gatcgccgcc gaggcaggcg acccatcctc ccatgccgat
     1981 ctgggtaatc tcctgcttaa gggccacggc gatatccagg attccatcca cacgcgggag
     2041 tggttcgagc aagcggcgga atctggcgat ttgatcgccg cgttcaattt cggtgtgtgc
     2101 ctggccgaag gggtcggcat cgaccgagac gaccaaaagg ccgcgcaatg gttgcgccgg
     2161 gccgccgatg gcgtggtcaa cgcccaatat tggtacggcc gtatgctggt cgaaggccgc
     2221 ggcgtggaca agaacgccga agaaggtcgc gcctggattg gccgcgcagc cgaggtcggc
     2281 atgatcgagg cccaggttat gctggccgat atgctgttga atggcaccgg tggaccgaag
     2341 gaccacaagg cggctttggc tttgttcacc aaagccgctg aggccggtca cgtcggcgcg
     2401 atgttcgcga ccggcgcgat gctgggtggt ggtcacgacg tgccggtgga tcgttcgcag
     2461 gctcagatct ggtaccggtc tgctgccgaa cgcggtcacc cgtacgcgca aatgatgttg
     2521 ggccgcttcc tgatgcgcaa tgtggcgggt gagcagaacc cgacggaagc tcggttttgg
     2581 ctggaacgcg cggcggcgca aggcctgcag gaggccaaaa acgacctcgc cggcctgccg
     2641 cctttgccgt ccgagacgtt ggacgaggcg gtttgatcgc tcgcgtgttg ccataccggc
     2701 agtcgtgaac gaccgcctgg acgagtcggc gaggcagacg caactggtaa aggatgcgtt
     2761 tgagcgtggc caggctgcgc tggtcgccgg cgataagatc gacgccctcc gttggctgga
     2821 acgcgcgcac cggctggcac cgcgagacgg cacgatcacg ctggttttgg cgtcggccgc
     2881 tattggccat gataatccca aggcggcggc gttgtttgag gcggtgctgg cgaccgaaga
     2941 tgtgcgggat gcctggtacg gacttgcctc ggcgcgactt ctgatggggg atttttctgc
     3001 ggcatgcgat gcggtcgcca acgtgttgag ccggtatgcg gtttggcctg acatcgccgg
     3061 gcttgccggt caggtggcgc gggcgaccgg tgcggcgggc tggtgtggcc tcgccggcac
     3121 aggtgcactc gttgtccaac cgggtaaaga gagcatcggg ccggtcgata tccggatcga
     3181 tggcacgcca ctcgaggcgc cggatgcatt gatgctgccg gggtcctggc cccgagcgca
     3241 gtgggttacg ataacggccg gaagtcagcg ccgccatctg atcgggagcc ccatctcgct
     3301 tcgcgcgatc ggacggatcg agggacaggt tgaaaccttc gatgacggtc ttcgaggttg
     3361 ggcgtggtgt ccgggcgatc gagagaccga tccgatccta tcggttggcg ctggtcgaat
     3421 gcgccgcgaa atcgtcgcga ccggcccggc tgctgacgtt cgtggtcttg ccccgctcgc
     3481 gcgtccccgg tcattcgtcg tgcctcgaga cgagcttcca aacgggaccg ggccaattcg
     3541 ggtgcgtgga cgggatggac acgatctcgt gggcagcccg atcgccagag atcggcggga
     3601 tttggtcggg atttcgcatt cgcgagctgc accatccgtt gacgcggtcg ccggagccgc
     3661 ggcccaaagg cgaaggcaac gcgggctcgc acgatggcgc gaccgcacaa cgcaatccgt
     3721 cgtgatggtc acgcataacg acggcggcgg ggttgagcgg cgcgtccagg cgtcggtcgc
     3781 ttcgcacgag gcacatggcc gccgggcgat cgtgttgcgt ccggaaatat cgcccgacgg
     3841 gttgacgtcg gtcgtggcca caagtggttc gctccctgac atggctttcg aattgcctcg
     3901 cgagcgggca tcgctgcttc gcctgctcag ggagatgcag ccggttgccg ccgaactgca
     3961 tcattttctg aaccacgacg cgtccctgtt cgagatcgtc cgcgcgcttg gcgtcccgta
     4021 tgacgctcac gtgcacgact acgcgtggtt ttgcccccgc atcgctttgg tcggccgcgg
     4081 tgaccgttat tgcggtgaac cagcgcagcc cgtctgtcag tcctgcctca ccgaactggg
     4141 tggctacctg cacgaggaca tcactgtcgc ggccttggtg gatcggtccg cttccatcct
     4201 gtccggagcg aaccagatca ttgcgccgtc acacgatgcg gcggcgcggc tggcacggca
     4261 ttttcccgga atttcaccga tcgtcattcc gcatgaggat gataccgcac tggccgaacc
     4321 gccgccggtt ccgagcgtga ccggaacggt gcgggtttgc gtcgccgggg cgatcggctt
     4381 gcacaaggga tttcacgtgc tgctcgcctg tgcgcttgac gcaaagcaac gtgatctgga
     4441 cgtgacattt gtcgtggtcg gcacgacgat cgacgatcag cgtttgatgg ataccggcag
     4501 ggtgttcgtg accgggccgt atcagcccga tgaagccgtc gcattgatcc gcgcgcaggg
     4561 ggccgcgatc gctttgttgc cgtcaatctg gccggaaacc tggtgtcttg gcctgaccga
     4621 attgtggcgc gccggcctgc gcgttgtggc attcgacatc ggcgcaccgg ccgaacgcat
     4681 ccgtcagacg ggccgcggct tcctgcttcc gttacatctt gcgccagccg ctattaatga
     4741 aacgttattg aaggcagcaa gagggcgatc ttcgcagtct ccgatccaca cgcagtcggt
     4801 tcacaacctt tagtagtgac gtaaccatca gttcgggcga tcttgcttcc gatccgtcgg
     4861 tcttcggcct acaaagcgcc agccactgca accataagta taagcgagac tgtgcatgcc
     4921 tcctgctgct gcttccgcgg ttcagaccat ggccaatgtg aaagaggcgc cagccgcctc
     4981 tcctgaacct gcctccgcgc ctcaggcgcc tggcccgcag acatctgccg ctcaggcgca
     5041 agccgccgga cgggtcaccg aacttcgcgt ctccgccaac ctgatgacgt tggaaaccgg
     5101 cgtctattgc gtgtttcccg caccgggcag tcgttcgcct gatccggcaa cggggttgcc
     5161 gggcgtgcgg atcacgcgat gcccgggaat ggccggccgg ccggaggctg tgtcgatcag
     5221 tacctttcgt gaagacggtt ggctggacaa caccgccgcg ctggtgcggg tcagcgatgg
     5281 tccggctcag gtgctggtga cgatttatca ggcagcgggc cagtccgccg aacatgcgcc
     5341 gcgtttgcag gtactgcgtc tggcgggcga tccagctgtc gccgtgtccg agccgccggt
     5401 tcctgcgccc aaggagcgtg atccggaggt catggcccat gtccagggta ccggcgacat
     5461 gccgggccag ttcggcgatt ggatcggcaa gcgcggcagc gggtcatgga ttgaaggttt
     5521 cggcatttcc gataagggac cgatcgcgcc aggtgacatg gagtatcagg gcgtactggg
     5581 ccgcggctgg ctgtcaccgt gggtcgaaaa tggcaaattc tgtggcagtc gcggcatggc
     5641 cttaccgctt ctgggcttga acgtgcgatt aaagggtgcg gcagcgaaag aattcaccgt
     5701 gcgctattct gcgaccttca tcgacggcag cgtggtgggg ccgatcgatg agggcaccgc
     5761 gtgcgaagcc ccgggcctcg cggcgatgga agcccttcag atcgagctga ttccgagggc
     5821 ggagcgttcg gcagcgacaa ggtcagcgaa tgatgcgaca catgatcgtt ccgccgctgc
     5881 gcggccttcg gcgccccgtg cgtcgacgcc taaatctccg gcgcgctcga gccgccatta
     5941 gtgcgtgcgc cggggcgcac tcggcgcact ccgggtcatc tgtgtttaac aaaatgaccc
     6001 gcactttcgg gcaggctgac tcagtccaac gtgcctcctg ctgccgctct ccatcgtagg
     6061 ctacgaattg aaattcttgt tcgtccacca gaattttcct ggtcagttcc tccacctcgt
     6121 gcgccatctg gtggcgatgc gggagcacga gatcgtcttt attaccgaag ccaacgcaaa
     6181 cgcgatcgat ggggtgcgga aggttcccta tatgaagccg aagccggcct caccggacac
     6241 gcatatcgcg gcgcgggagt tggatgtggc ggtccgccgc gccgagatcg tcgcccgtac
     6301 tgcgacgtca ttgaagcacc ttggcttcac gcccgacgtc attatcggtc atcaggggtg
     6361 gggcgaaatg ctcaatctgc ccgacgtgta tcccggcgtg ccggcaatcg gatacatgga
     6421 attttactat caaaccgacg gcgcggatgt cgtgttcgac ccggaatttc ccattgatcg
     6481 agccgatttc ccgaggatcc gtgcaaaaaa cgccatcaat cacctcgcgc tgaacctaag
     6541 ttgctacggt gtcacaccaa caaagtggca attgtcgacc tatcccgact gggctcggcc
     6601 gcggatcgac ttaatgtggg agggcgtcaa tctcgacctt tgctcgccgg acgaaaaagc
     6661 ccgtcacgca cagttgaaaa tcggcgacat gacgattcgc cgtaacgata cgctggtgac
     6721 ctatgtctcg cgcgatctcg agccgtatcg tggtgtccac acgatgatcc gggctctccc
     6781 tgcgatgttc cgagcccgga aaaacctgaa agtggttatg gtgggtggcg acggggtcag
     6841 ttatggcgca ccggcacccg acggcgggac atggcgcgag gtcttcctgc aagaggtcgg
     6901 ggatcagatc gatgcatccc gcatcgtgtt tccaggccgc atcgaataca caacgtatct
     6961 cgctttgctg cgccggtcgg acgcgcatgt gtatctgaca tatccattcg tcgcgtcctg
     7021 gtcgctgagg gaagcgttgg ccatgggctg tgccatcgtc ggcagcgata ccgatccggt
     7081 gagcgaattc atcgcgcatg gccaaaacgg tttgctgact tcgtttttcg acccgcaagg
     7141 tcttgccgat gccgtgctgc aggtgctgga ggacaagcgg ctggatcaga aattgcggac
     7201 cggggctcga cattatgccg aacgcaatct tgcgatggac gattacttgc ggatgtatac
     7261 acaaaagatc gagcttctca ccggcggctt gctgatcgcc ccggaaccgc gcacccgccg
     7321 ttccgtgcaa cgaagcgcaa aagagcgccc ggtgaacgtg tagccgcttc tgtcgagcct
     7381 aattgggtga agcagaatgc gtcccgcgcg gaaatcagct aatccttcgc tgaccgtgcc
     7441 ttggcgacag cttctttcaa ctccgatgtc tctacggcgc cggccagcaa atcgttaccg
     7501 ataatcatcg ccggggtgcc ctggatgttc agcctttggg ccatccgcag attggcatcg
     7561 atctgttttt gaatcgatgg atcgtccata tcatgcaaca ggcgcgcgga atcgaggccg
     7621 agcttcttgg cctccgcctc gatcgtggcg cgggtaattt ccggcggcat atgcatcagc
     7681 gcgtcgcgca gtttgatata ggcgtcttgc ttccgcgccg cgagcagcgc cttggtaccg
     7741 agaacgcttg gcgcgccaag gatcggcaaa tccttgtaga ccagccggac atcgtgatcg
     7801 gcagccagga aatccgccat ctcgggttcg agtttgcgac aatacgggca ccgaacatcg
     7861 aagaactcga cgatcgtcac gctgccctgc ggattgccgg caaccgggtc gttcgggttg
     7921 accaaggtat cctttgcggc caggaccgcg gcccgaacag cggttttctc ctgctcggca
     7981 tcgtcggctt gcagcgcaat gacagcgtcg cgcaggattg acgggtcatg cttcacggca
     8041 tcgcgaatga tggcgatgat ttcggcacgc tgcgcgctgt tgaattcgtc ggcccaggtg
     8101 ggggcaggga tgaatgcggc gcccagaagc ggcaggcagg ccgacagcag gcgtatccgg
     8161 gttcggctgg gaaaccacat ggacaatttt ctttcgtaat ggcctggctg ctgaccgggg
     8221 cactgatccc gccagcatac cggcgtcgcg gcggcagttg tagcaggttg gcgacagatt
     8281 ccgtgacctg tcatacatgc atattgcggc atggcatatt gcggtttggt tcgcgcacgt
     8341 tgagcgaggc tcgcaggcat gacggcctgg tgccggaaag acggtgcttc ctgctaccgc
     8401 ctggcgccgg cggtgagaat ccagcatccg gttgccgctg ttgacgaagc cgtttatggc
     8461 accacggcga accaggtagc tgcggacccg cccggcggag aggcgagccg cgctgaggag
     8521 gagcaccgcg aatgcggttc gacgtctcgg ttcgattcgc gtttcgggtg cctgatcatg
     8581 cgaccaggct gataaatgga gaccagggac gggaatggcg tcgatactta ggacgaattc
     8641 cggcggcggc agaccacgct ggtgcggcat gccgcagaaa ctgaccggtt tccattcctg
     8701 gcttcgcccg gcaatacgtc tggcggcgcc gctggcgctc ggcatgctgg ttaccggctg
     8761 ctcggtcttt gactccatca accatacgct gtttggcacg cgtagtggac ccgcgccggg
     8821 tcagcaaggg tatgtcaaag gctttctcgg ctgggtcgtg gctgacgagc cgcgtgcagc
     8881 actggtaggc aaggaggtgt tatccggcgg aggtaacgcg gcggacgcgg ctgttgcggt
     8941 cggattgtcg ctcgccgtca cgctgccttc gcgtgcagga cttggtggtg gtggcgcctg
     9001 cattgcctat gccagcgatc gtcaccttct gccgcgcggc tacccggaag ccataacgtt
     9061 cgtctcaccg ccggtgcgca gtgtcggcgg tggagaccgg cccgcggccg tgccgatgct
     9121 ggcgcgcggt atgtttatgc tccacgcccg ctacggcaag ctaccgatcg agcaactgat
     9181 caccaaagcc gaggacctgg ctcggcgagg ggtgccggct tccacagcgc tgacgcggga
     9241 cctcgccctg gttgccgggc cattattcgg cgaccccgaa gcgcgagcgg tcttcagcct
     9301 tggcggcgca ccgttggccg aaggccagag gcttctgcaa ccgcaattgt cggcgacttt
     9361 ggcagaattg cgggtatccg gcattggcga tctgtatcag ggcgtattgg cccgtcgcat
     9421 cgcacaggtc tctccgtcgg ccggggtgcc gatcgggttg caggatttat ggtttgcctt
     9481 gccctcgctt tcttcgcctg tgatcgtgcc tgttggcgac gatcaggtcg cgtttccgcc
     9541 aaccgagggc ggcgttgggg cggcggcggc gctgatcgcg ctcaacagcc agccggcaga
     9601 ctttcagtca gcctgggcgc gctcgctcgg agccgccgcg acctggcgtg ccggtggggc
     9661 aaatttggat caggtattgc acggcaacgt ggccgctccc gccacgacac cgctttatcc
     9721 ggcgtcgacg acattcgcca cgttggaccc cgatggtaat gcggtcgttt gcgccctcac
     9781 catgaacaat cttttcggca ccggcagaat ggtgccgggg tttgggtttc tcgccgctgc
     9841 ctcgcccgcg acggttaacc caccgctcct ggcgccgggg ctggcctgga gcaacgatcg
     9901 gcatgctttt catgccgagg ccggcggcag tggtcaggct ggtgcggcgt tggccgccgc
     9961 agtcgcactg tccaacagtt tgcgctcggg ttaccccatg acaagcctgg tgccggatcc
    10021 tgggcgggcg aacgtgattt cgtgcgggcg ctatttgccg ggttcggact cgagttgtgg
    10081 cgctgccgcc gacccgcgcg aggctggcct ggcagccggc ggacaatgat ctggcgcacc
    10141 ccgcgtcgtg cggctggcgt tggcagcggc actgacatgc ccgacgatga aaagcgacgc
    10201 tgccaggctt acctccggca cctgagccga acgtggcatt gaaaattggc cgtggcgctg
    10261 cggcgcctcc gttcattgtc atggacgtca ttgccgcggc caatgcacgc caggcagagt
    10321 tgccggcggg tgcgccacat gtgatccgca tggaggtggg tcagcccggt actggcgctc
    10381 cggccggcgc agtggaagcg gcgcaggcgg ctctgcggtc tggtaatccc ctcggctata
    10441 ccgaggcgcc tggccggata tcgctgcgcg aacgcatcgt tgcccatatc cgcgattggt
    10501 acgggctggc cgtgccggtc gcccgggttg cggtgaccgt cggggcctct ggcgcgtttc
    10561 ctttggcgtt cctggcagca tttgaccccg gcgaccgggt ggcgatggcg gcgccattct
    10621 acccgcccta tgtcaacatc ctgaccgctc tgggtatcca accggtgatc cttgaagcgg
    10681 gaccggagac caggtttcag cccagtacgg cgatgctgga acggctggag ccgcgtccgg
    10741 acgggctggt ggtagcgagc ccgtgcaatc cggccggaac gatgctgcat cgggatgaac
    10801 tggcggcgat cgcggcctgg tgcgacggca acggcgtgcg cctgatcagc gacgagattt
    10861 atcacgggtt gaattacgaa cacccgatcg cgaccgccgc cgcgttcagt ccgaatgcca
    10921 tcgtggtaaa cagcttttca aaatacttct ccatgaccgg ttggcggatc ggctggatgg
    10981 tgctgccgga agacctgatc cgcccggtgg aatgcctgac ccagaatttg ttcatcagcg
    11041 cgccctatat ctcgcaggtc gcggccgagg cggcgttcga ttgccacgac gaactgcggg
    11101 ccaacgtcgc gcgctatcgc cgatcgcgcg atcacttgct ggcgacgctg cccggcgccg
    11161 ggtttccgca tttgtccccg gccgagggtg cgttctattt gttcgccgat atcggcgatc
    11221 gctcgaacga tagtgtcgcg ttctgtacgc ggatgctgaa tgaagctggg gtcgcctgtt
    11281 ctcccggagt ggatttcgac cggacccggg gcaatcgttt tgtgcgcttc agttattgcg
    11341 gaccagaggc ggatatgcgc gcggcggcag aacggttgaa gaggtggcag tagcaagcgt
    11401 gcgcaacgcc gacaaccgtt atcccttcgc aagggccgcc tgcttcctcc gccgctcgtg
    11461 ccacgcaccc atcaattgca gcacggtagc tgatgtttcc tcgatcgagc ggcgcgttac
    11521 atcgatgacc ggccagccat gccggttgca caaccgccgc gcccagagca actcggcttt
    11581 caccgcctct tcgtccacgt attccgtttc gctctggcga atgactccgg tgtgaccgcc
    11641 ggccccgatc agccgcaatc gatgccgcct gatatcgatc agcgcctgtg cttcgattgc
    11701 caaaccaacg acggggcaat gcgcctgctc cagaccttcc ggcaatatgg cctgcggcac
    11761 cagcggcacg ttggccgctt tgattcccct gttggcgagg aaaaagcacg ttggagtctt
    11821 cgaacttcgc gacaccccca ccaggatcac atccgcttcc gccagtccca cctgggcctg
    11881 tccatcgtca tgctgcaaca cgtaatgcat ggcgtcgatg cgcttgaaat agtccgcatt
    11941 cataacgtat tgccggcccg gccgatgtgt cgccgcctcg ccgatatagt cctgcagcat
    12001 attcattacg ggatctagca cattcaccac cggcagattg atccgttggc acatcgtttc
    12061 cagttcgccg cgcagggcct gatcgaccag agtggacaga accggcccag gctcggcctc
    12121 gatacccttg aggacgccct gtagttggaa gctggtgcgg atcaggctcc agcggtgggt
    12181 gatgatatag gcggtgtcga actgtgccgt ggtcgcgcgg gcgagcgtgc caagcgtctc
    12241 cccggtggct tccgagacga gatgcagatt gatccggcgc tcattcatgg tgacaatccc
    12301 gatcagcggc gatgggacag gatgcggcgg cgggaacggc ctgtcgagac gcaataaaat
    12361 gccgcaagga agctggctta ccatgggaaa accgcccgcc aaacgacaga ttcgcctcaa
    12421 cgccttcgac atggcctgtg tcggccacat ccagcatggc atgtggacgc atccgcgcga
    12481 ccattcggct gactacacgt cgctcgatca ctgggtttcg cttgcccgga cattggagcg
    12541 tgggctgttc gacggtttgt tcctcgccga catcctgggc gtgtacgacg ttttggaggg
    12601 gacgcccgac ccctccttgc gagccagcgt ccaggtcccg ttgctggacc cgatggcgct
    12661 ggtccccgca atggcacatg ccacatcgca tctcgggttc ggcgtgacct gcaacctcgc
    12721 ctacgaaccg ccgtatctgt tcgcccggcg gatggcgacg ttggaccatc tgagcggggg
    12781 ccgaatcggc tggaacattg tgaccggcta cctggacagt gccgctcggg cgatggggct
    12841 gcgcgagcag atggcgcacg acgatcgtta tgatctcgcg gaagaataca tgcaggttgt
    12901 gtatgctcta tgggaaggcg gttggcgcga cgacgccgtc gtgcgggacc gggttcggcg
    12961 ggtttacacc gagccgagcc gggtccggcc aatccaccac gcaggcaagc agtaccagct
    13021 cgacgcattg ccgctgtggg aaccatcacc gcaacgaacg ccggtgttgt atcaggccgg
    13081 cgcttcggac cgcggccgga tcttcgccgg ccgccatgcc gagtgtgtgt tcgtcaacgg
    13141 caccaacctc acgcacgccg cgaaggtcac agccgatctg cgagcacggg ccgggtctcg
    13201 gccgatccag gtgtttgccg gcgctacggt tgtcaccgca gcgaccgagg cagaggcgca
    13261 cgatcggctg gaggaatacc gccgccacac caataccgag ggggcattgg cacatgctgc
    13321 cgcctcgctc gggatcgatt tttcccagtt cgatatggat gaaccggtcg atgccggcga
    13381 cagccaggcg attcagtcca acgttgcatc gatcgcggct tcgctcggcg cgggctggac
    13441 gaaacggcag ttgatcgacc gtttcattct gggcagccgg cagacgccaa tcgtgggttc
    13501 gccgtctcag gtcgcggatg cgttgcaagg ttgggtggcc gacgcggacg tcgatgggtt
    13561 caatttgtcg cggacggtga ttccggaatg cctggaggat tttattgatt tgatcgtgcc
    13621 ggcattgcag gaccggggtg cgttcaagac ggcctattcg ctgggtacct atcggcagaa
    13681 actgtttggt gccggggatc ggttgcccga cgatcatccg gcggcgagag aaagatgggt
    13741 ggatccactg taatactggc gaccttgata agcgcgaaac gcgccccgcc agtacccggg
//
LOCUS       DATAVD010001308         3175 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2918152, whole genome shotgun sequence.
ACCESSION   DATAVD010001308 DATAVD010000000
VERSION     DATAVD010001308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3175
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2918152"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1071)
                     /locus_tag="VHX39_24920"
     CDS             complement(<1..1071)
                     /locus_tag="VHX39_24920"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX3994428.1"
                     /translation="MDKSLSDSRVAAHIQGQPQTPHASEISLLLVSRSAIWLRAVHGA
                     TRQLGGGDVLTCDARGALARLAGITSHYTHLLVDRNDAEGLLDELADLTTEVAAPDTD
                     MLLLGTADSRRPHVRTVPTATSRSVAEALMATSPTRNGPAMNLAELTAALQGAMIETR
                     YQPIIRIADRHPVGVEALARLNHPERGTLLPDRFVPQLEDAGLAAELTGLVSARAFAD
                     LAGPFLAERGLRMSVNFPLDVLLQPAALDRLEEQRIAAGLSADSIVIELTESRPVEDI
                     PVLLRSLERLRGLGYGAAIDDVGPAVPRLAPLLELPFTSLKLDKDLVKQVNESTEIGS
                     FLATTIVQAKARGLTVVAEGVET"
     gene            complement(1230..2006)
                     /locus_tag="VHX39_24925"
     CDS             complement(1230..2006)
                     /locus_tag="VHX39_24925"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX3994429.1"
                     /translation="MASYENIIVETIGRVGLIRLNRPAALNALCDALVKELGAQLRAF
                     DADKAIGAIVITGSDRAFAAGADIKEMRDRTNPSAMVEDFIGANWEAVLQIKKPVIAA
                     VAGFALGGGCELAMMCDMIFAADTAKFGQPEINLGVIPGAGGTQRLTRAVGKSKAMDM
                     VLTARMMDAAEAERANLVSRVFPADQLLPEVMKIAERIANLSPVAVQFGKQAVNRAFE
                     STLVEGVRHERALFLSLFGTPDQKEGMAAFVEKRKPNFQV"
     gene            complement(2070..3098)
                     /locus_tag="VHX39_24930"
     CDS             complement(2070..3098)
                     /locus_tag="VHX39_24930"
                     /EC_number="1.1.1.157"
                     /inference="COORDINATES: protein motif:HMM:NF006125.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HEX3994430.1"
                     /translation="MRDPIACLGAGRMGRGIAVVFAFAGHDVTVIDFKPRTSEAFARL
                     AAEATAEIGATLAMLARIGLMRPEQAAPIAARIRIVADADAEAALANAAVVFEGVPEV
                     LALKREALARASAMAGPEAIITSTTSTILVDALADAVVAPERFLNAHWLNPAFLVPLV
                     EVSPGARTSADTTSRLLACLESVGKVPVICAARPGFIVPRIQLLAMNEAARMVDEGVA
                     SAADIDKAVKYGFGFRFAVLGLLEFIDWGGGDILHYASEYLSKALDHPRYQAPDVIAR
                     NMAAGHIGMTTGRGFLNYEGVDMAAYREGRLSAFADLLRGMGLARPPVMDNTDNTGGT
                     SRHDNDGQ"
BASE COUNT          549 a          998 c         1052 g          576 t
ORIGIN      
        1 ggtttcgacg ccttcggcca ccacggtcaa accgcgggcc ttggcctgga cgatggtggt
       61 ggccaggaag ctgccgattt cggtggattc gttgacttgc ttcaccaggt ccttgtccag
      121 cttcaaactg gtgaacggta attccagcag cggcgccagg cgcggcacgg cggggccgac
      181 atcgtcgatc gcggcgccgt aacccaggcc gcgcagccgc tccagcgaac ggagcagcac
      241 cgggatgtct tcaaccgggc ggctttccgt cagctcgata acaatactgt cggcggagag
      301 gccggcggcg atgcgctgtt cctccaaccg atccagcgcg gcgggttgca acagcacgtc
      361 cagcggaaag ttcaccgaca tccgcagacc acgttcggcc aggaacgggc cggcgagatc
      421 ggcgaacgct cgggcggaca ccaggccggt caattcggct gccagaccag catcttcgag
      481 ctgcggcacg aagcgatcgg gcagcaacgt gcctcgttcg gggtggttga gacgcgcaag
      541 ggcctctacg ccgacgggat ggcgatcggc gatccggatg atcggctgat agcgggtttc
      601 gatcatcgcg ccctgtagcg cggctgtcag ttcggccaga ttcatggccg gtccgttgcg
      661 cgtgggggaa gtcgccatca aggcctctgc aacagatcgg gacgtggccg tcggaacggt
      721 gcgaacatgg gggcgccggg aatcggccgt tcccagaagc agcatgtccg tgtccggcgc
      781 tgcgacttcc gtggtgagat cggcgagttc atccagcagt ccctccgcat cgttccgatc
      841 gaccagaaga tgggtgtaat gcgaagtgat tccagccagc cgagccaatg cgccgcgtgc
      901 gtcgcaggtc agaacgtcac cgccgcccag ttgccgtgtc gcgccgtgga cggcccgtaa
      961 ccagatcgcg ctgcggctga ccaaaagcag gctgatttcc gacgcatgcg gcgtctgtgg
     1021 ttgcccctgt atgtgggcag caacgcgtga atcggacagg cttttatcca tgcctgtctg
     1081 ctactccaag tcgctaatat gtgcgagaaa aatcccggta atgagatgtt aaaatagcat
     1141 aaacgaccgg ggggtgtcat aacttataag tgtgctgaca caccccgcaa ttactcggaa
     1201 atatatttga tatgaatgtc agtgctttgt cacacctgga aatttggctt tcgcttttcg
     1261 acaaacgccg ccatgccttc tttctggtct ggggtgccga acagtgagag aaacaatgca
     1321 cgttcgtgcc ggacgccttc gaccagggtc gattcaaagg cccggttgac cgcctgtttg
     1381 ccgaactgga ccgcgaccgg cgacagattg gcgattcgct cggcgatttt catgacctcc
     1441 ggcagcaact ggtcggccgg gaagacgcgg gataccagat tggcccgttc ggcttcggct
     1501 gcgtccatca tgcgggcggt cagcaccatg tccatcgcct tcgatttgcc gacagcacgg
     1561 gtcagccgct gggtgccgcc ggcacctggg atgacgccga ggttgatctc cggctggccg
     1621 aacttcgcgg tgtcggcggc gaagatcatg tcgcacatca tcgcgagttc gcagccgccg
     1681 cccagggcga agccggccac cgcggcgatc accggcttct tgatttgcag cacggcttcc
     1741 cagttggcgc cgatgaagtc ctccaccatc gcgctggggt tggtgcggtc gcgcatctcc
     1801 ttgatgtcgg cgccggccgc gaaggcgcgg tcgctgccgg tgatgacgat ggcgccgatc
     1861 gccttgtcgg catcgaaggc ccgcaactgg gcgcccagtt ccttcaccag cgcgtcgcac
     1921 agcgcattca gtgcggcggg gcgattcagc cggatcaggc cgacgcgacc gattgtttcg
     1981 acgatgatgt tttcgtaact cgccattacg cacttctccc cggcgcggcg gatcgtccac
     2041 ccgcgatgtg actctgacgg accataccgt cactgtccgt cgttgtcatg gcgggaggtg
     2101 ccgcccgtgt tgtccgtgtt gtccatgacc gggggccgcg cgaggcccat gccgcggagc
     2161 agatcggcga acgcgctcag ccgcccttcg cgataggcgg ccatatcgac gccttcgtag
     2221 ttcagaaagc cccggccggt ggtcatgcca atatgtcccg cggccatgtt gcgcgcgatg
     2281 acgtcgggcg cctggtagcg cgggtgatcc agcgccttcg acagatactc gctggcataa
     2341 tgcaggatgt cgccgccgcc ccagtcgatg aactccagca ggcccagcac ggcgaagcgg
     2401 aagccgaagc cgtatttgac cgccttgtcg atgtcggccg cgctggcgac gccttcgtcc
     2461 accattcgcg ccgcctcatt catcgcgagc aactggatgc gcggcacgat gaagccagga
     2521 cgggccgcgc agatcaccgg gactttgccg acgctttcga ggcacgcgag caggcgggaa
     2581 gtcgtgtcgg cgctggtgcg ggcgccgggc gatacctcca ccaggggcac caggaaggcc
     2641 gggttcagcc agtgggcgtt gaggaaccgt tccggggcca cgaccgcatc ggcgagggcg
     2701 tccacaagga tggtcgaagt ggtggaggtg atgatcgcct cgggtcccgc catggccgac
     2761 gcccgggcca gtgcctcgcg cttcagggcc aggacttccg gtacgccttc gaagaccacg
     2821 gccgcgttgg ccagggcggc ctcggcgtcg gcatccgcca cgatacggat acgtgcggcg
     2881 atcggtgccg cctgttcggg tcgcatgagg ccaattcgtg ccagcatcgc cagtgtggcg
     2941 ccgatttcgg cggttgcctc ggccgccagg cgcgcgaagg cttcggatgt gcgcggcttg
     3001 aagtcgataa ccgtcacgtc gtggccggcg aaggcgaaca ccacggcgat gcctcgcccc
     3061 atgcgtccgg cgccaaggca ggcgatcggg tccctcatgc ggcgaaaccg ttttgcagca
     3121 gcgccagcaa tgccgtccgg tcgaggtccg ccaggccgag acttgccagg gtgcg
//
LOCUS       DATAVD010001309         3012 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3663992, whole genome shotgun sequence.
ACCESSION   DATAVD010001309 DATAVD010000000
VERSION     DATAVD010001309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3012
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3663992"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..419
                     /locus_tag="VHX39_24935"
     CDS             <1..419
                     /locus_tag="VHX39_24935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539771.1"
                     /note="activates fatty acids by binding to coenzyme A;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HEX3994431.1"
                     /translation="NPSATREAFAGGWFHTGDLAVMHPDGYVEVKDRAKDIIVSGGEN
                     ISSLEVEEVLYQHPAVMEAAVVAQRDEKWGETPHAFVTLKPGSEAVSAETIIAWCRAH
                     MAHFKCPRHVTFGPLPKTSTGKIQKFELRERTGQAG"
     gene            complement(428..778)
                     /locus_tag="VHX39_24940"
     CDS             complement(428..778)
                     /locus_tag="VHX39_24940"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3994432.1"
                     /translation="MPETISALTLATHDMARAVAFYTALGFTIKFGGPGAAFTSFQVG
                     AGHLNLTRVGREIQWSWWGRVIFHVADVDETYACACAAGLAPEFAPRDASWGERYFHI
                     VDPDGHELSFAHPL"
     gene            878..1189
                     /locus_tag="VHX39_24945"
     CDS             878..1189
                     /locus_tag="VHX39_24945"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEX3994433.1"
                     /translation="MFIAIRKYKVQRGTGPGLAQRVQDGFVPLMRQMHGFRGYHLLDG
                     GPDILVSVTMFDNAEEALASSEAAADWVRDNVLEFTRGMPEVTVGHALISEPEPEDDP
                     P"
     gene            complement(1324..1617)
                     /locus_tag="VHX39_24950"
     CDS             complement(1324..1617)
                     /locus_tag="VHX39_24950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994434.1"
                     /translation="MASRGQGTVRFVYRGVGINSDGPPGTMIELVPLPLFRSIPGTAE
                     PGIVTICGDPGLPDTRPAPREVLTPADGDTLGDNAAGGVKTAGGAPPDDGTCA"
     gene            complement(1630..2142)
                     /locus_tag="VHX39_24955"
     CDS             complement(1630..2142)
                     /locus_tag="VHX39_24955"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX3994435.1"
                     /translation="MKSALFTGAALLMAVTSTTFAQSQVPSSQPPAAATQPPAGSVIG
                     PSGPASTSAMNSSDNARAGREANAGGMFMNVPARSDLSSKVVGLSVHNNENAALGTIK
                     DIAFDANGVKAYILAVGGFMGLGDHYVAVRPSAINISYDAASNKWQALMNTDADALKA
                     APEFQYANNG"
     gene            2420..>3012
                     /locus_tag="VHX39_24960"
     CDS             2420..>3012
                     /locus_tag="VHX39_24960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEX3994436.1"
                     /translation="MSNQTIVPVILSGGSGTRLWPVSRESFPKQLWPLLSERTLLQDT
                     VLRGNAPGFAAPIVVCNHEHRFLIAEQLREVGITNARVVLEPVGRNSAPAIAAAAVLV
                     AEENPDAVLWMMAADASIADTTALLDALAKAAAAARAGKIVTFGMHPTAPETGYGYIE
                     IGPALRDAPGVHAVARFLEKPDAETATQLVAGGNHLW"
BASE COUNT          584 a          947 c          947 g          534 t
ORIGIN      
        1 agaacccgtc cgccactcgg gaagccttcg ccggaggctg gttccatacc ggcgacctcg
       61 cagtgatgca cccggacggc tatgtggagg tgaaggatcg cgccaaggac atcatcgttt
      121 ccggcggcga gaatatctcg tcattggagg tggaggaggt gctatatcaa caccctgccg
      181 taatggaagc cgcggtcgtg gcccagaggg atgagaagtg gggcgaaaca ccgcatgcgt
      241 tcgttacgct taagccggga agcgaggcag tctcggcgga gacgatcatt gcgtggtgtc
      301 gcgcccatat ggcgcatttc aaatgcccgc ggcacgtaac gttcgggcca ttgccgaaga
      361 cgtcgacagg caaaatacag aagttcgaat tacgggagag gaccgggcag gcaggttgaa
      421 cggcctgtca caatggatgt gcaaaactca attcgtgccc atccggatcg acaatgtgaa
      481 aatatcgctc gccccacgac gcgtcgcgcg gcgcgaattc gggcgccagt ccggcggcac
      541 aggcgcacgc atatgtctca tcgacgtcgg caacatggaa gataacgcgc ccccaccagg
      601 accattgaat ttcgcgaccg accctggtca gatttaagtg gcccgcgccg acctggaaac
      661 tggtgaacgc agcccccggc ccaccgaact taatcgtaaa gcccagtgcg gtgtagaagg
      721 cgacggcgcg cgccatgtca tgcgtcgcca gggtaagcgc gctaatggtt tcaggcatca
      781 tgcctccagg atttccggtc gctcgccggc gtgatatcgt tgcgcagttt cgaacgccaa
      841 agccacgaca cgccaaattg cgacagcggg ggcaaacgtg ttcattgcca tcaggaaata
      901 caaggttcaa cgcggtaccg ggccgggcct tgcgcaacgt gtgcaggacg gtttcgtgcc
      961 gctgatgcgg cagatgcacg ggtttcgagg ctaccatttg ctcgatggtg gcccggatat
     1021 tctggtcagc gtgacgatgt tcgacaacgc cgaggaagcg ctggcctcca gcgaggccgc
     1081 ggcggattgg gtcagggaca acgtcctcga gttcaccaga ggcatgcctg aggtgacggt
     1141 cggccatgcc ctgatcagcg agccggaacc ggaagacgat ccgccgtagc cagcggtgca
     1201 cctttccggg ttccgacgca cgcaccatgt tcagcacact ccccctcggc ggttcgcagg
     1261 agcgtgcaaa atgatcaggc taatgctggc aacgaccatg ctggcagttt taatcggctc
     1321 cgctcaggcg caggtcccat cgtccggcgg tgccccaccg gccgtcttca ccccgccggc
     1381 ggcgttgtcg cccagtgtgt cgccgtcagc gggtgtcagc acctcgcgcg gagcaggtct
     1441 ggtatcgggc agcccagggt caccgcagat agtgacgata ccgggctcgg cggtgccggg
     1501 aatgcttctg aacaacggca acggcacgag ttcgatcatg gtgcctggcg gcccgtccga
     1561 gttgataccc acaccgcgat agacgaaccg gacggtgccc tgcccgcggg aggccacgcg
     1621 tggtccggtt tagccgttgt tcgcgtactg gaattccggc gctgctttca gcgcatcggc
     1681 atcggtattc atcaacgcct gccatttatt gctcgcggca tcgtaactga tgttgatcgc
     1741 agacggccgc accgcgacat agtggtcgcc aagccccatg aagccaccga ccgccaggat
     1801 gtaggctttc accccattgg cgtcgaaggc gatgtccttg atcgtgccga gagcggcgtt
     1861 ctcgttgttg tggacactca ggccgaccac tttcgaactc aaatccgacc gcgccggaac
     1921 gttcatgaac atgccgccgg catttgcctc acgtccggcg cgcgcattgt cagaactgtt
     1981 catcgcgctg gtactcgccg ggcccgatgg gccgatgaca gaacctgcag gcggctgggt
     2041 cgccgcggcg ggcggctggc tggacgggac ctggctctgc gcgaaagtgg ttgaagtcac
     2101 cgccatcagc agcgccgcac cggtgaaaag tgctgatttc atgtcaaacc tccgttaatg
     2161 tcgcggcggc cgcgtggaac ggccgcgcat tgcaggatac gaggcatgca aagagcgtca
     2221 ctccccgcgg acctccccac gggcaaagtc ttcactcaag gctgcggttc cgtgacatcc
     2281 aattcactag gccgtcaggc cgcccgacaa ccgttcgggc cacggcaggc ccatacaacc
     2341 gcggcccgac accggattgt caccgcggcg cgttattgtc gctggcacca tcatcccggg
     2401 tcaggttaac actacagtca tgagcaatca gaccatcgtc cccgtcatcc tctccggcgg
     2461 ctccggcacg cggctatggc cggtctcgcg tgagagtttc ccaaaacagc tctggccgct
     2521 gctgtccgag cgcaccctgc tgcaggacac cgtcctgcga ggcaacgcgc cagggttcgc
     2581 cgcccctatt gtggtctgca accacgaaca ccggttcctg attgccgagc aattgcgtga
     2641 ggtcggcatc accaatgccc gggtcgtact ggaacctgtg ggccgcaaca gtgcgcccgc
     2701 gattgccgct gctgcggtgc tggtggcgga agaaaaccct gatgccgtgc tgtggatgat
     2761 ggcagcggac gcctcgatcg ccgacaccac tgcgttgctc gacgcactgg ccaaggcggc
     2821 cgcggcagcg cgggcgggca agatcgtcac cttcgggatg cacccgaccg caccggaaac
     2881 cggctacgga tacatcgaaa tcggtccggc gttgcgcgat gcacctggcg tgcacgcagt
     2941 cgcgcggttc ctggagaaac cggacgccga gaccgccacg cagttggttg ccggcggcaa
     3001 tcacctgtgg aa
//
LOCUS       DATAVD010001310         4280 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3664163, whole genome shotgun sequence.
ACCESSION   DATAVD010001310 DATAVD010000000
VERSION     DATAVD010001310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4280
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3664163"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..991)
                     /locus_tag="VHX39_24965"
     CDS             complement(<1..991)
                     /locus_tag="VHX39_24965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose synthase"
                     /protein_id="HEX3994437.1"
                     /translation="MASELNVLARIAARVARQNPRTADFTRNILQRALKQIIACFPVY
                     RTYVDGTSVPDADRRDLDWAVAQARRNEPDVDPSVFDFLYRLLSTDLVAQPRSGFSRH
                     SVVRFAMRVQQYSGPVMAKGLEDTAFYRYNRFTALNEVGGHPDQFGVSMASFHKANAQ
                     RAPHAMLATATHDTKRGEDVRARLAVLSEMPDEWSRQVHIWNRLLRARMGDLEGTASP
                     DRNDEYMFYQLLLGAWPAELTSLDPDATDAFAERIAAAMIKSLREARLHSSWAAPNAA
                     YEDAAVAFVHLALDVSRPNAFLDTFLPFQKRVARLGVRNSLLQTVLKLTLPGMP"
     gene            complement(1000..2268)
                     /locus_tag="VHX39_24970"
     CDS             complement(1000..2268)
                     /locus_tag="VHX39_24970"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HEX3994438.1"
                     /translation="MADSGSLSLPGAPIPRATYRLQFRPGFGFSDAAALAPYLGMLGI
                     SHVYASPYLKARPGSQHGYDIVDHRQLNPELGSEQDFRAMVAVFRQHGIGQILDFVPN
                     HMGIGGAENLWWQDVLEWGEASEYAGWFDIDWDPDPRALRGKVLVPFLGCQYGEVLEA
                     GDLRLRFQSDSGDFAVWAYDSHKLPICPLHYERILGDAVPALERLGDAFSGLPNWHPH
                     IVRRARELQSELATLARKCDDVREALDHAVARLNGEPGKLETWSGLDALIKDQHWRAA
                     HFVVAGDDINYRRFFNINELAGLRMELPELFDLAHKLVFDLLRDGTLDGLRIDHIDGL
                     LDPKGYLVRLRETAPRPFYLVVEKILASHETLRDDWPVEGTTGYEFTNLVLGMLVDPA
                     GEAALSQTYADFTAVDEALATSSVTARCVS"
     gene            complement(2261..4084)
                     /gene="treZ"
                     /locus_tag="VHX39_24975"
     CDS             complement(2261..4084)
                     /gene="treZ"
                     /locus_tag="VHX39_24975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose trehalohydrolase"
                     /protein_id="HEX3994439.1"
                     /translation="MRFRLWAPSHWEIRLELDDAAELVSMRPIGDGWHELTTDRARPG
                     TRYRFVLPGDRRVPDPASRFQPKDVHGPSEVIDPTGYVWSDIEWRGRPWEEAVVYELH
                     VGAFTPAGTFQAVIDKLEHLVALGVTAIEIMPVSDFPGARNWGYDGVLPYAPDATYGR
                     PEDMKALVNAAHASGLMVLLDVVYNHFGPDGAYVHTIAPEMFTERHKTPWGAAINMDG
                     PASGPVREYFIHNALYWIEEFHIDGLRLDAVHAILDESQPHFLTELAERVRAAAPDRH
                     IHLILENEANAAHRLERREGGPEGLNEGDVGPRWYTAQWNDDVHHVLHVAATGEAQGY
                     YSDYRGDTEKLGRALAEGFAFQGEMMAYRGHPRGEPSAGLPPGAFVAFIQNHDHIGNR
                     PFGDRITAIASRASVRAIAAVYLLLPQVPMLFMGEEWAAAQPFPFFCDFGPELAGAVR
                     EGRRREFSRFAAFRDPATLQRIPDPTAEETFAAAKLAWDDVLREPHASWLDWYCRVLA
                     IRQSAIVPCLPQIRSGGRYYVVGNGAVVARWFVGTAGKELMLAANLSDAIVEGFPPAT
                     GRVLWREGEPDQDTGQFGPWSVRWTLSDMADGGDKEAGTRG"
BASE COUNT          861 a         1342 c         1282 g          795 t
ORIGIN      
        1 ccggcatacc gggcagggtc agtttcagga cggtttgcag caggctgttg cggacgccca
       61 acctcgccac acgtttctga aacggaagga aagtgtccag aaaggcattc ggccgcgaca
      121 catcgagtgc gagatggaca aaggccaccg cggcatcttc ataggcggcg tttggtgccg
      181 cccagctgga gtggagcctg gcttcacgga gcgatttgat catggcggca gcgatacgtt
      241 cggcgaaggc gtcggtcgcg tccggatcga ggctggtcag ttccgctggc cacgcgccaa
      301 gcaggagctg atagaacata tattcatcgt tccggtcagg cgatgcggtt ccttccagat
      361 cgcccatgcg cgcccgcagc agacggttcc agatgtgaac ctgccggctc cattcgtccg
      421 gcatctcaga caggacggcg agccgcgccc tgacgtcctc gccgcgcttg gtgtcgtggg
      481 tggcggtcgc aagcatggcg tgcggcgcac gttgcgcgtt ggccttgtgg aacgaggcca
      541 ttgatacgcc aaattgatcg ggatgtcccc cgacctcatt caatgcagta aagcggttgt
      601 aacgataaaa ggcggtgtcc tccagacctt tggccatcac cggaccgctg tattgttgca
      661 cgcgcatggc gaagcgcacg acggaatggc ggctgaagcc actgcgcggc tgcgcgacaa
      721 gatcggtact cagcagacgg tagagaaagt cgaagacgct gggatctacg tcgggttcgt
      781 tgcgtcgcgc ctgagccacc gcccaatcga ggtcgcgacg gtcagcatcc ggcacgctcg
      841 tgccatccac ataggttcga taaaccggga agcaggcaat gatctgcttc aatgcacgtt
      901 gcaggatgtt gcgcgtgaag tctgcggtgc gcggattctg ccgcgccacg cgtgcggcga
      961 tacgggccag cacattcagc tcgctggcca tttcatttgt catgatacgc atcttgcagt
     1021 cacggacgat gtcgccaagg cctcgtcgac cgcggtgaag tctgcgtagg tttgcgacaa
     1081 tgctgcctcg ccggcaggat ccaccaacat tcccagaacc agattggtga attcgtagcc
     1141 ggttgtgccc tcgacgggcc agtcgtcgcg tagcgtttca tgcgacgcaa gtattttttc
     1201 cacgacaaga tagaacggcc gcggggccgt ttcccgtagc ctgaccaaat aacccttcgg
     1261 atccagcaac ccgtcaatgt ggtcgatccg caatccgtcc aacgtcccat cgcgcagcaa
     1321 atcgaacacc agcttatggg cgaggtcgaa caactccggc agttccatgc gtaagccggc
     1381 gagttcgttg atgttgaaga agcggcgata gttgatgtca tcgccggcaa cgacgaaatg
     1441 ggcggcacgc caatgctgat ccttgatcag agcatcgagc ccgctccacg tttccagttt
     1501 gcccggttcg ccgttcaggc gtgcgacggc atgatccagc gcctcgcgca catcgtcaca
     1561 tttacgggcc aaagttgcga gttcgctctg cagctccctg gcccgacgca cgatgtgcgg
     1621 gtgccagttg ggcaggccgg aaaacgcgtc gccaagccgt tccagggccg gaaccgcatc
     1681 accaagaatg cgctcataat gcaagggaca gatcggcagc ttatgagagt cataagccca
     1741 gaccgcaaaa tctccggagt ccgattggaa gcgcaaccga agatcgccgg cctcgagaac
     1801 ctcgccgtac tggcagccca gaaacggcac cagcactttg ccgcgcaagg cgcgtgggtc
     1861 ggggtcccag tcgatgtcga accagccggc gtattccgag gcctcgcccc attccagcac
     1921 gtcctgccac cacaggttct cagcgcctcc gatgcccata tggtttggca cgaaatcgag
     1981 aatttgccca atgccgtgct gacggaacac cgccaccatg gcgcggaaat cctgctcgct
     2041 cccgagttcc ggattgagtt gccgatgatc gacgatgtca taaccatgct ggctgcctgg
     2101 ccgcgctttc aaatagggcg aggcgtagac atgactgatg ccaagcatcc ccagatatgg
     2161 cgccaacgcc gccgcgtcgg aaaaaccgaa ccctgggcga aattgcaaac gataggtggc
     2221 ccggggaatc ggtgcgcccg gcaaggacag tgagccggaa tcagccacgt gtgcctgcct
     2281 ctttgtcgcc accatcagcc atgtctgaca gcgtccatcg cacgctccag ggaccgaact
     2341 ggccagtatc ctggtcgggt tcgccctccc gccaaagcac gcggccagta gctggaggaa
     2401 aaccttcgac tatcgcatcg gacaaatttg ctgccagcat cagttccttg ccggcggtgc
     2461 caacaaacca ccgcgcaacg acggcgccat tgccaacgac atagtagcgt ccgccgctgc
     2521 ggatctgcgg caggcacggc acaatggcgc tctgccgtat cgcgagcacg cgacagtacc
     2581 aatcgagcca gctggcatgc ggctcccgca acacgtcatc ccaggcgagt ttggcagccg
     2641 cgaaggtttc ctccgcggtc ggatcgggga tccgttgcag cgttgcagga tcgcgaaaag
     2701 cggcaaaacg cgaaaactct cggcgcctgc cttcgcgcac cgcaccggcg agttcggggc
     2761 cgaaatcgca gaagaacgga aacggttgcg ctgctgccca ttcctcgccc atgaacagca
     2821 ttggtacctg cggcagcagc aaatacaccg ctgcaattgc gcgcacggaa gcacgcgagg
     2881 cgatggcggt tatgcggtcg ccgaatgggc gattgccgat gtggtcgtgg ttctggatga
     2941 acgcgacaaa cgcgccagga ggcagaccag cactcggctc accgcgcgga tggccacgat
     3001 acgccatcat ttcgccctga aaggcaaagc cctccgcgag agcccgcccc aatttttccg
     3061 tgtcgccccg atagtcggag taatatcctt gggcttcgcc ggtcgccgcc acgtgcaaca
     3121 cgtgatgcac atcgtcgttc cactgcgcgg tataccagcg cggcccaaca tcgccctcgt
     3181 taagtccttc ggggccgcct tcccggcgtt ccaggcggtg cgccgcattt gcctcattct
     3241 cgaggatcaa gtgaatgtgc cggtccggtg cggcagcacg cacgcgctcc gccagttccg
     3301 taaggaaatg cggctgcgat tcgtcgagga ttgcgtgcac cgcatccaga cgaagaccat
     3361 cgatgtggaa ttcttcgatc caatacagag cattatggat gaagtattcg cgtaccgggc
     3421 cacttgccgg tccgtccata ttgatagccg cgccccaggg cgtcttgtgc cgctcggtga
     3481 acatttccgg tgcaatagtg tgtacatatg cgccgtcggg tccgaaatgg ttgtagacga
     3541 cgtccagcag caccatcagg ccgctggcat gggcggcgtt caccagcgcc ttcatgtcct
     3601 ccggcctgcc ataggtggcg tcaggtgcgt atggcagcac cccgtcgtag ccccagttcc
     3661 gcgcgccggg aaaatcgctg actggcataa tctcgatcgc agtcacgccg agggcgacaa
     3721 ggtgctcgag cttgtcgatc accgcctgga atgttcccgc gggggtgaag gcaccgacgt
     3781 ggagttcgta aaccacggct tcctcccatg gccggccgcg ccactcgatg tcgctccaga
     3841 catagccggt tgggtctatc acttcgctgg gaccgtgcac atcctttggc tgaaaacgcg
     3901 acgccggatc cggcactcgc ctgtcacccg gcagcacaaa ccgatagcgt gtccctggtc
     3961 gtgcccgatc cgtcgtaagc tcatgccagc cgtcgccgat gggccgcatg ctcaccaact
     4021 ctgccgcgtc gtcgagttcg agccggattt cccagtgcga gggcgcccaa agccgaaaac
     4081 gcacagctcc gtcctcccac agctcggtgc caaacggcat gtgatggaca cgggttttct
     4141 gtccaccggg tggggtgtca ggagtatccg agcaacgtga tgatggcgcc acggaagcct
     4201 cacgggctgt tcagaggtcc tgagaaacca ctctcagccc ccagtggttc ccttcaaggc
     4261 gcaggattac gctatcggtg
//
LOCUS       DATAVD010001311         2704 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3287459, whole genome shotgun sequence.
ACCESSION   DATAVD010001311 DATAVD010000000
VERSION     DATAVD010001311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2704
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3287459"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..313)
                     /locus_tag="VHX39_24980"
     CDS             complement(<1..313)
                     /locus_tag="VHX39_24980"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEX3994440.1"
                     /translation="MAVNKVFANSEAALAGLLHDGMTIMSGGFGLCGIPSALIDAVRA
                     SGVKNLTIISNNAGIDDAGLGLLLNTRQVKKMISSYVGENATFAKQYLAGELEIEFNP
                     QG"
     gene            409..582
                     /locus_tag="VHX39_24985"
     CDS             409..582
                     /locus_tag="VHX39_24985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994441.1"
                     /translation="MRRHLVIFPAFQRDTGHAHPHSDAAVRTYTALLSEIGRDQAAVD
                     AEIADACCEAGLA"
     gene            complement(612..869)
                     /locus_tag="VHX39_24990"
     CDS             complement(612..869)
                     /locus_tag="VHX39_24990"
                     /inference="COORDINATES: protein motif:HMM:NF014043.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HepT-like ribonuclease domain-containing
                     protein"
                     /protein_id="HEX3994442.1"
                     /translation="MERGVETVSEASRYLSADLKARHPHIPWRNVADIGNVHAYQNVA
                     PPVMWSPVRDHLPLVERVCREELAVLRATDPGGGQQDSDLP"
     gene            complement(992..1285)
                     /locus_tag="VHX39_24995"
     CDS             complement(992..1285)
                     /locus_tag="VHX39_24995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEX3994443.1"
                     /translation="MDRTQAISILKDHEAELKQLGVQHLYLFGSTARGDAREESDVDL
                     FFDYERGQFSLFDLMDVQERATRILGCKADVMSRDSLHKMLRPRIEASALQIF"
     gene            1822..2172
                     /locus_tag="VHX39_25000"
     CDS             1822..2172
                     /locus_tag="VHX39_25000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007398841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX3994444.1"
                     /translation="MAKIVRTEPGAILSKAVEYHGFVYLPGITSRDTKLDIKGQTADV
                     LAQIDAMLEHHGTDKTRLLTATIWVKHIADRGAMNEVWTPWLPKDGAPARACVQAEMA
                     APAVLVEIMVTACK"
     gene            2272..2637
                     /locus_tag="VHX39_25005"
     CDS             2272..2637
                     /locus_tag="VHX39_25005"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX3994445.1"
                     /translation="MSNFFSRLFGQSSVASPAWLEIDDLRQRLDAGDSLVLIDVRGSD
                     EFTSPPGHLPGAINIPLPELAGRVAEVAAQSRSVVLVCKTDRRSAKAAEMLLAAGLTD
                     VAVLRGGTDGWHQHGLPLD"
BASE COUNT          498 a          861 c          804 g          541 t
ORIGIN      
        1 tgccctgcgg gttgaactcg atctccagtt cgccggcgag atattgtttc gcgaatgtgg
       61 cgttctctcc gacgtaggaa ctgatcatct tcttcacctg gcgcgtgttg agcagcaagc
      121 caagcccggc atcgtcgatt ccggcgttgt tggagatgat ggtcaggttt ttgacgcccg
      181 aggcccggac tgcgtcgatc agcgccgagg gaatgccgca caacccgaag ccgcccgaca
      241 tgatggtcat cccgtcgtgc aacagtcctg cgagcgctgc ctccgagttc gcaaagacct
      301 tgttgactgc catgaacgcc cctttcctca gccgcgcgga cttaaccgcg tggtcttact
      361 tcctgcaaga gggcgaccgg agccggcggt gcagatacgg aaccgtcgat gcgccgccat
      421 ctggtgatct tcccggcctt tcaacgtgat accgggcacg cgcatccgca tagtgatgcg
      481 gcggtcagga cctacacagc ccttctgtcg gaaatcggcc gcgatcaggc agcggtcgac
      541 gccgagatcg cggatgcctg ttgcgaggcc ggtctcgcgt gacggttcct gccgctgcgg
      601 cagcgaaatg cttacggcag gtcagagtct tgttggccgc cacccggatc cgtggcacgg
      661 agaacggcca gttcctcgcg gcagacgcgc tccaccagcg gaaggtggtc ccggacaggg
      721 ctccacatca caggcggcgc cacgttctga taggcatgaa cgttgccgat atcagcgacg
      781 tttctccatg ggatgtgcgg gtggcgggct ttcaggtccg cagacaggta acggctggcc
      841 tctgaaacag tctcgacgcc gcgctccacc aatcattgct tctcccaatc ggcctcgaac
      901 gcatcgcgat caaggtctcc gaccacgtgc ctcacgcgtt cgatcgcttc aatgatatcg
      961 gccaggcgtg ggagcagcga acgcggagcc atcaaaagat ttgcagggcg gatgcctcga
     1021 tccggggccg tagcatcttg tggaggctgt cccgtgacat aacgtcggcc ttacagccga
     1081 ggatgcgggt ggctcgctcc tgaacgtcca tcagatcaaa caggctgaac tggccccgct
     1141 cgtaatcgaa gaacaggtcc acgtcggatt cctcccgcgc atcgcctcgg gcggtcgagc
     1201 cgaacagata aaggtgctgg acgccgagtt gcttaagctc agcctcgtgg tctttcagga
     1261 tggagatggc ctgagtacga tccatgcgtt ccggatagca aaaaccagtc ggtggttcga
     1321 gcgacgcggt cccgccaggg cttatgctgc ggtaccggcg tccgcgaaat cgacatcctc
     1381 ataaaattcc gcaaccggca cggcaatgcc ttggatcggc gtctgtgcga atgcgcacgc
     1441 gcccgtttgc gtgtcgcaat cgtcaggcgg tctttatgcc tgtgcgggcg ccaggatttt
     1501 ctgatcgcgc atgctgtatt tggccattag actctggccc ctttgcgcct tattgcggtt
     1561 ctttgcgttt ttttgcgttt tcctttcttg cttgtccgct acccccgtgc ggcgccccga
     1621 agcaccacct tccgacctga cgcaaaccaa caacccctcc gacatcaccc tcgcggtgac
     1681 cgcgacctgt gaagcattgg acgaacgggc cccaggcctc gatccatggc aaccggtaga
     1741 cccttccgac atgggctctg gcctgagtgg cgagagtgcc ttagaaccgc cgcagccgct
     1801 tccaggggag tttatcacac catggccaaa atcgtccgca ccgaacccgg cgccatcctg
     1861 tcgaaagccg tcgaatatca cggttttgtt tacttgcccg gcattacctc gcgcgacacc
     1921 aaactggaca tcaagggcca aaccgccgac gttctggcgc aaatcgacgc catgctggag
     1981 catcacggca ccgataagac ccgcctgctg acggcaacca tttgggtgaa acatatcgcc
     2041 gaccgcggcg caatgaacga ggtctggacc ccgtggctgc cgaaggatgg cgctccggcc
     2101 cgggcctgcg tgcaagccga aatggccgcg cccgctgtgt tggtcgagat catggtcacg
     2161 gcctgcaagt aacggtcagc cattgccctg ggccggggca acggggcact cgatgtgggt
     2221 cagcttcgca tcgactgacg cggcatgctg acccgcaacg gagaatacgc cgtgagcaat
     2281 ttcttctccc gcctgtttgg gcagtcgtcc gtggcctcgc ccgcctggct tgaaatcgat
     2341 gatttgcggc aacgtctcga tgccggcgat tccctcgtac taatcgacgt gcgaggatcc
     2401 gatgagttca cttcgccacc aggtcatttg ccaggtgcga tcaacattcc attgccggag
     2461 ctggctggcc gggtagcgga agtcgccgcg cagtcccggt ccgtcgtgct ggtgtgcaag
     2521 accgaccgcc ggtcggccaa ggcagcggaa atgttactcg ccgccggctt aacggacgtt
     2581 gcggtattac gcggcggcac cgatggctgg catcaacacg gtctgccgct ggactgaatc
     2641 caccggcact actcctccac ccgcaaccgg cttgccagca gttcgccgtg gttctgcaac
     2701 accc
//
LOCUS       DATAVD010001312         2711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1243149, whole genome shotgun sequence.
ACCESSION   DATAVD010001312 DATAVD010000000
VERSION     DATAVD010001312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2711
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1243149"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(85..807)
                     /gene="phbB"
                     /locus_tag="VHX39_25010"
     CDS             complement(85..807)
                     /gene="phbB"
                     /locus_tag="VHX39_25010"
                     /EC_number="1.1.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018454 - acetoacetyl-CoA reductase
                     activity [Evidence IEA];
                     GO_process: GO:0042619 - poly-hydroxybutyrate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetyl-CoA reductase"
                     /protein_id="HEX3994446.1"
                     /translation="MSRVALVTGGTRGIGSAISLALKAEGRTVVAVYAHNDAAAAAFR
                     DEHAISVMKFDVCDFEACKAAVDRIVAEHGPIEIVVNNAGITRDGTMLRMNRDMWDAV
                     IDTNLGSCFNICKLTFEHMRTAKFGRIVNIGSINGQAGQYGQVNYAAAKSGIHGFTKA
                     LAQEGARYGITVNAIAPGYVDTEMVRAVPGEVLKKIVAKIPVGRLGHAEDIARGVVFL
                     TADDADFITGSTLSINGGQHMY"
     gene            complement(830..2002)
                     /locus_tag="VHX39_25015"
     CDS             complement(830..2002)
                     /locus_tag="VHX39_25015"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HEX3994447.1"
                     /translation="MNDIVIVSAARTPVGSFNGALSTLSAQSLGAIALRAAFARAGVE
                     AGDVDEVIFGQVLAAAGGQNPTRQAARAAGLPDSKTAFGINQVCGSGLRAVALGAQQI
                     RTGESAIVAAGGMESMSLSTHAAHLRNGTKMGGLEFVDTMLKDGLWDAFHGYHMGNTA
                     ENVATKFQITREQQDAFALASQQKASAARKSGRFKDEIEPVTVKTRKGDVIVADDEYI
                     RDDASMATMARLRPAFTKDGTVTAGNASGINDGAAALVLMSAEEAQKRGLTPLARIAS
                     FATAGVDPAVMGTGPIPSTRKALQRAGWKVEDLDLIEANEAFAAQALAVNKDLGWDTA
                     KVNVNGGAIAIGHPIGASGARVLVTLLHEMTKRDAKKGLATLCIGGGMGVAMCLER"
     gene            complement(2172..>2711)
                     /locus_tag="VHX39_25020"
     CDS             complement(2172..>2711)
                     /locus_tag="VHX39_25020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994448.1"
                     /translation="AVAATSAPPGRRTFYKVGHWTAAELRASLAGTTMVHYTHEYGTQ
                     VSYYSPAGREWLWFPGNSALVPEQWRTEDRPTQQAAICFKDPPNSFDAVTLRRGGDWE
                     CHLAMNLVPLGSRLAQRKGDVFGLSQRSAPPFVTSAAPGEFDHIVALLPPASPDDEPP
                     PLKRVMLHEVPDAASIRAP"
BASE COUNT          482 a          858 c          843 g          528 t
ORIGIN      
        1 accgctcgcg gtgtagcgga tttggccaca caggcagcca ccggtcatgt ttgccatcgt
       61 tttgactccc ccttgatttc cagattagta catgtgttgc ccaccgttga tcgacagcgt
      121 cgacccggta atgaaatccg catcgtcggc agtcaggaac acaacgccgc gcgcgatatc
      181 ctcggcatgg cccagtcggc cgacggggat cttggcgacg attttcttga ggacttcgcc
      241 gggcaccgcg cgcaccattt cggtatcgac atagccaggt gctatcgcat tgacggtgat
      301 gccgtaacgc gcgccctcct gagccagcgc cttggtaaat ccgtggatgc ccgatttggc
      361 ggcggcatag ttgacctgac cgtactgccc ggcctgaccg ttgatactgc cgatattgac
      421 gatgcggccg aatttcgcgg tgcgcatgtg ctcgaacgtc agtttgcaga tgttgaagca
      481 ggacccgagg ttggtgtcga tgaccgcgtc ccacatgtcg cgattcatgc gcagcatggt
      541 accgtcgcgg gtgatgccgg cgttgttgac cacgatctcg atcggaccat gttccgcgac
      601 aatccgatca accgcagcct tgcaggcttc gaagtcgcag acatcgaact tcatcaccga
      661 gatggcgtgc tcgtcgcgga atgcggcggc ggccgcgtcg ttgtgggcgt aaaccgcgac
      721 gaccgtgcgg ccctccgctt tgagagccag gctgatggcg gacccgatcc ctcgggtgcc
      781 gccggtgacc aatgcgacgc gactcatgat gttgcctccc cggtgttgtt cagcgttcca
      841 ggcacatggc gacacccatg ccgccgccaa tgcacaaagt ggcaaggcct ttcttcgcat
      901 cccgtttggt catttcgtgc agcaaggtga ccagaacccg cgcacccgag gcaccgatcg
      961 gatggccgat cgcaatcgcc ccgccattca cattcacctt cgccgtatcc cagcccagat
     1021 ccttgttcac cgccaaagcc tgggctgcaa acgcctcgtt ggcctcgatc agatccagat
     1081 cttcaacttt ccagccggcg cgctgcaagg ctttacgggt cgacgggatc ggcccggtgc
     1141 ccatcaccgc aggatcgacc ccggccgtag cgaacgaggc gatccgggcc agcggggtca
     1201 gtccgcgctt ctgggcttcc tccgcgctca tcagcaccag ggccgcggcg ccatcattga
     1261 tccccgaggc attgccggcc gtcacagtgc cgtccttggt gaaagccggc cgcagccgcg
     1321 ccatggtcgc catcgaagcg tcgtcgcgga tatattcgtc atcggcaacg atcacgtcgc
     1381 ctttgcgggt tttcaccgtt accggttcga tttcgtcttt gaaacggccg gacttgcgtg
     1441 ccgccgaagc tttttgttgc gaagccagcg cgaacgcatc ctgttgctca cgcgtgatct
     1501 ggaacttcgt tgcgacattt tcggcggtgt tgcccatgtg atagccgtgg aacgcatccc
     1561 acagcccgtc cttgagcatg gtgtcgacaa actccagccc gcccattttg gtgccattgc
     1621 gcagatgcgc ggcgtgggtc gagagactca tgctctccat ccccccggcg gcgacgatgg
     1681 cgctttcgcc agtgcggatc tgttgcgccc ccagagcgac agcgcgcaaa cccgaaccgc
     1741 agacctggtt gatcccgaag gcggtctttg agtcgggcag acctgcggcg cgggccgcct
     1801 gtcgggtcgg gttctgcccg ccggcggcgg cgagcacctg accgaaaatc acctcatcca
     1861 catcgccggc ttcgacgccg gcgcgggcaa acgccgcacg caaggcgatc gcgcccaggg
     1921 actgtgcgga aagcgtgctt agcgcgccgt tgaaactgcc aaccggggta cgagccgcgg
     1981 agacgataac gatgtcgttc atgctggagc actcccgaag ggcgggcctc cccgccggag
     2041 ttggggttgt agccgcgtca taggtgagga gaaaggtggg acgcggcagg acgatgaccc
     2101 aatatgggcg tattccggtc cctgcgacag gcgtccaatg cctgttgcgt gcatatccgg
     2161 tttgtcgcgg tttaaggcgc ccgtatgctc gcggcgtcgg ggacctcatg gagcatcaca
     2221 cgcttcagag gcggcggttc gtcgtcaggc gacgccggag gcagcaacgc gacgatatgg
     2281 tcgaactcac cgggggccgc gctcgtgacg aacggtggcg ccgagcgctg cgaaagacca
     2341 aagacgtcgc ctttacgttg ggcgaggcgc gagccgagtg gaaccaggtt cattgcgaga
     2401 tggcactccc aatcgccacc tcgcctgagg gtcactgcgt caaaagaatt gggtggatcc
     2461 ttaaagcaga tcgcggcctg ttgtgtcggg cgatcctcgg tgcgccattg ttcaggcacg
     2521 agcgcggaat tgcccgggaa ccaaagccat tcgcggccag ccggactgta ataggacacc
     2581 tgcgtgccat actcgtgggt gtagtgcacc atcgtcgtgc ccgccaatga cgctcgcaat
     2641 tctgcggctg tccaatgacc gaccttgtag aaagttcgcc tgccgggtgg cgcagatgtg
     2701 gcggcgaccg c
//
LOCUS       DATAVD010001313         9343 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2918473, whole genome shotgun sequence.
ACCESSION   DATAVD010001313 DATAVD010000000
VERSION     DATAVD010001313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9343
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2918473"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..415)
                     /locus_tag="VHX39_25025"
     CDS             complement(<1..415)
                     /locus_tag="VHX39_25025"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015072141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3994449.1"
                     /translation="MTGASSGLGEATARALSAQGARVVLGARRQDRIQALASELTSSG
                     GNGIAVTTEVADRQQVKTLVDTAVEAYGRIDVMINNAGVMPQAPLERLKVDEWDRMID
                     VNIKGVLYGIAAALPYMQRQKSGHFINVSSVAGHKV"
     gene            complement(467..1456)
                     /locus_tag="VHX39_25030"
     CDS             complement(467..1456)
                     /locus_tag="VHX39_25030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3994450.1"
                     /translation="MQTRKLGGNGLQVSTIGLGCMGLSSGYGPAADAQDAIKLIRTAV
                     ERGVTFFDTAEAYGPYKNEEVVGEALAPFRDRVVIATKFGHAFGKEFGQLGLDSRPEH
                     IRQVAEASLKRLKTDRIDLFYQHRVDPAVPIEDVAGAVKDLIQQGKVKHFGLSEAGVR
                     TIRAAHAVQPVTALQSEYSLWWREPEQEILPTLEELGIGFVPFAPLGKGFLTGAISAD
                     TQFANNDMRNIAPRFTREIRKANQAGVDLLTQIAVRKQVTAAQIALAWLLAQKPWIVP
                     IPGTTKLHRLAENLGAADMELTSDDLRDIDAAVSKIDVEGERYPPFLAAMVDR"
     gene            complement(1499..1894)
                     /locus_tag="VHX39_25035"
     CDS             complement(1499..1894)
                     /locus_tag="VHX39_25035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008892238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3994451.1"
                     /translation="MEIKRAGSQPSAKGPDDYFTGTVRVDRLFTAPDPARVAGASVTF
                     EPGARTAWHTHPLGQTLIVTAGCGRVRREGGPIEEIRPGDVVWFAPGEKHWHGAAPTT
                     SMTHIAIQEALDGKVVDWMEKVTDAQYLG"
     gene            2011..2910
                     /locus_tag="VHX39_25040"
     CDS             2011..2910
                     /locus_tag="VHX39_25040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3994452.1"
                     /translation="MPRTDLNDIVAFLAVARERSFTRAAAQLGVSQSALSQTVRGLET
                     RLGLRLLTRTTRSVAPTEAGDRLLHAAGPRLEEIDAELTALTALRDKPSGTIRITAHD
                     HAIRAVLWPALETLLPGYPDIRVEIVIDYGLTDIVAERYDAGVRSGEMVAKDMIAVRI
                     GPDMRSAVVGAPSYFAKRPRPKTPRDLTGHTCINLRLPTHGGLYAWEFQKGKQELKVR
                     VEGQLIFNGTTPMLDAALAGFGLAYVPEDAIQTHLAAGRLIQVLADWCPPYPGYHLYY
                     PSRRQPTPAFALVVEALRYRGGT"
     gene            3048..3704
                     /locus_tag="VHX39_25045"
     CDS             3048..3704
                     /locus_tag="VHX39_25045"
                     /inference="COORDINATES: protein motif:HMM:NF036686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994453.1"
                     /translation="MTELAPPGVSVHFTRLSASGPAGTHAGQEERNRSQLASLDEAAR
                     LLAMLSPQVIVMAHTATSYTIGREAEADLVRRQEAATGTRFITAFGSVLEAFACLGIK
                     RVAYATPYDAKVTEQGRAHLTLHGLDVVNVARLEGVRNIYEETAERAYAVGRQADRPE
                     AQAVFLSGVGMPTLSMLQMLEDDLGKPVISAASAMMWNALRIAGVRAPRQGYGRLFHT
                     "
     gene            3719..4330
                     /locus_tag="VHX39_25050"
     CDS             3719..4330
                     /locus_tag="VHX39_25050"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HEX3994454.1"
                     /translation="MPDPERLDPNRTALIAYDVCRRALTPSDPARRTAIRPVLDAWIA
                     IIATARAAGVPVIYTTPVSRADGADVVMLPTDLSAETGVPPLTNGIEGTAEAGFPDEI
                     APRPEDYVFLKRRPSAFYGTGVGELLHMLRRDTIIIGGGATNRGVETSVREAFNFDLK
                     TIVVRECCWGSDQAAHAYSLEKAMKMYARIRHLDQVTAMLGRA"
     gene            complement(4327..5316)
                     /locus_tag="VHX39_25055"
     CDS             complement(4327..5316)
                     /locus_tag="VHX39_25055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3994455.1"
                     /translation="MDNRFDVELISVTKRYGTTLAVDGISLRIPRGTYCCLLGPSGCG
                     KTTTLRMIAGHEAVSAGDVLIHGENVSDLPPIKRGTAMMFQSYALFPHMSCLDNVAFS
                     LKMRGVAKKERHARAREYLALVHMADFAERLPAQLSGGQQQRIALARALINRPRVLLL
                     DEPLSALDPFLRIKVREELKRLQRELGITFIHVTHSQDEAMALADLMVVMENGHIRQS
                     AHPRDVFERPVSPFIARFIGSHNVLRAGGGPIAVRADRCWLGSAADGPHVNGQVVAVE
                     YQGAMVRVAVMTDAGDEVSALVPDQTFYKKPAEPGDPATLVWSPQDTHELMEA"
     gene            complement(5316..6158)
                     /locus_tag="VHX39_25060"
     CDS             complement(5316..6158)
                     /locus_tag="VHX39_25060"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3994456.1"
                     /translation="MTARISDKRPWTFYALATLFGAFLLFLYGPMFVIYVLSFQGPNG
                     GVTFPMVGTSLVWFREVFEKGQMANLPVAFERSLSLAMVVSILTVVFSVAAGLGFRRR
                     FPGSGVLFYLAVASLVMPSLLVGFGIGLGFQFLGWQPSLFTSALGAQLTWTLPFGLFA
                     MFAVVNRFNRSWEEAATDLGANAWQRLRHVTIPILLPGIIGVAMGAFTLSYDEYARTT
                     LTIGPKNTLPLEIYALISSATSPTLFAIGTLTTGVSFLAILISLLVVLRLQRRRGRTL
                     AKVG"
     gene            complement(6155..7096)
                     /locus_tag="VHX39_25065"
     CDS             complement(6155..7096)
                     /locus_tag="VHX39_25065"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3994457.1"
                     /translation="MSSSNLTSILPVSLRSRLAAASGQRRSTRLPPWLVSWLQVGPLA
                     LILIVLFALPTILFLVVSFYDYDRVGIYPAFLLDNYRELLTTPATWRVYVSSLRFAFI
                     VWAITLFLGFNIAYFLIFHIRSKITRTVLFLLCAIPFWTSGIIRTIAWIPFLGRNGAF
                     NQILMGLGLTSQPLSFLLFSDFAVIVTYVHLFTLLMVGPIANSLSKIDPALLEAAVDA
                     GASRWRTMVDVVIPLSKTGIVLGSILVFTQVMGDYFVVRQMSGGQSASIVSMLSTQIQ
                     AMEYPPAAANAVVLVIFVAILVAAMMKIVDVRKELVK"
     gene            complement(7093..8175)
                     /gene="rutA"
                     /locus_tag="VHX39_25070"
     CDS             complement(7093..8175)
                     /gene="rutA"
                     /locus_tag="VHX39_25070"
                     /EC_number="1.14.99.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization protein A"
                     /protein_id="HEX3994458.1"
                     /translation="MQLGVFIPIGNNGWLISTTSPQYKPSYDLNKTIVDKAEAFGFDF
                     ALSMIKLHGFGGPSQFWDYNLESFTLMAGLAATTTKIKLFATCAVLTMPPPIAARMAV
                     TIDSISHGRFGVNIISGWQRREYTQMGIWPGAEHYKRRYEYCAEYVSVMNELWATGRS
                     DFKGDFFQMDDCRCLPTPTAKIPIICAAQSDAGTKFAAQYADYNFCASFGYNAPTAVA
                     PSVARLVAATQETGRHCGALILTMIIADETDEAANAKWEHYKAGTDQEALAYRDEQAQ
                     DDPSTDIYAQPNRRRLLGTNKLPTNQGVLVGSYASVARMLDELAAVPGVQGVMMTFDD
                     FVIGMEQFGTRIMPLMRSRNEIKIAA"
     gene            complement(8191..>9343)
                     /locus_tag="VHX39_25075"
     CDS             complement(8191..>9343)
                     /locus_tag="VHX39_25075"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3994459.1"
                     /translation="AGPPVTAIPAIAAQATKDLGFTVQMQASENADLLNRFLSQASAI
                     DCADVALTNQRYLIGRNVLQGIPVGKFKYWDQTLPLFTKGEYPDGRKIVQQGITPNMV
                     LYATDATGQKVTKGGTASDFVTGIPTVTNGDTLGIRPDLVGRKVDSWADVLSPDFKGK
                     AAIQDNPTIGIIDIAMAMEARGDIKYGDKGNMTKPEIDKTIDTMLATKRAGQFRAFWS
                     SFDQSVNLMASGEVVIQSMWSPAVAAVRSRGIPCTFQPLKEGYRGWGYTLGVMKHVDG
                     LKLDCFHEYMNWYAAGFPGSFIAREGYYSAQPDTARKYLTPAEAAYWFDGKPAQTDIL
                     SPFGKIMEKAGNVRDGGSLWQRLGNIAVWNSVMDEDRYLTRRWNEFITS"
BASE COUNT         1760 a         3101 c         2823 g         1659 t
ORIGIN      
        1 cgaccttatg cccggccacc gatgaaacgt taatgaagtg accggacttc tgccgctgca
       61 tgtacggcag agcggccgca atgccgtaca gcacgccctt gatgttcaca tcgatcatcc
      121 ggtcccactc atcgactttc agccgctcga gcggtgcctg tggcatcacg ccggcgttgt
      181 tgatcatgac atcgatccgt ccatatgcct cgacggctgt atccaccagg gtcttcactt
      241 gttggcggtc ggcgacttcg gtggttacgg cgatgccatt gccaccactg ctggtcaatt
      301 cacttgccag cgcctggatc cgatcctggc gccgcgcgcc cagcacaacc cgagcgcctt
      361 gggcagatag agctcgagca gttgcttcac caagaccgct actggcgccg gtgatgacga
      421 cgaccttgcc ttagatgttg tatttcgtgg cttttactcc tgcatttcag cgatcgacca
      481 ttgccgccag gaagggggga taacgctccc cctccacgtc gatcttggag acggcggcgt
      541 cgatgtcgcg aagatcgtcg ctcgtcagtt ccatatcagc cgcaccgaga ttttccgcga
      601 ggcggtgcaa cttcgtggtg ccgggaatcg gaacgatcca gggcttttgc gccagcagcc
      661 aggccagcgc gatctgggcc gccgttacct gtttccggac cgcgatttgc gtcagcaagt
      721 cgaccccggc ctggtttgcc ttccgaatct cccgcgtgaa gcggggcgca atgttccgca
      781 tgtcgttgtt ggcgaattgc gtgtccgcgc taatggcgcc ggtaagaaaa cctttcccga
      841 gcggggcaaa gggcacgaag ccgatgccga gttcttccag tgtcggcagg atttcctgct
      901 ccggctcccg ccaccacagc gaatattcgc tttgcagggc cgtgaccggc tgcaccgcgt
      961 gcgccgcgcg gatggttcgc acgccagctt cggacaggcc gaaatgcttg accttgcctt
     1021 gctggatcag gtccttgacg gcgcccgcca cgtcttcgat cggcacggca ggatcgacgc
     1081 gatgctgata gaacaggtcg atgcggtcgg tcttgagccg cttcagtgac gcctcggcga
     1141 cctgcctgat gtgctccggc cggctgtcca ggccgagttg cccgaactcc ttgccaaatg
     1201 cgtggccgaa tttggtcgcg atcacgaccc ggtcgcggaa cggcgccagt gcttcgccga
     1261 cgacttcctc gttcttgtac gggccgtagg cctcggcggt gtcgaagaag gtgacaccac
     1321 gctcgacggc tgtccggatc agcttgatcg cgtcctgcgc gtcagcggcc gggccatagc
     1381 cggagctaag tcccatgcag ccgaggccga tagttgacac ttgcagaccg ttaccgccga
     1441 gttttctagt ttgcatcgtg ttcgttcctg tcttttgaat cccggcagta accggctgtc
     1501 agcccaggta ttgcgcgtcg gtgacctttt ccatccagtc aacgaccttg ccgtccagcg
     1561 cttcctgaat ggcgatatgg gtcatggacg tggttggcgc ggcgccgtgc cagtgcttct
     1621 cgccgggcgc aaaccagacc acatcacccg gccggatttc ctcgatcggg ccgccctcgc
     1681 gccgcacccg gccgcagcca gcggtgacga tcagcgtctg gcccagcggg tgcgtatgcc
     1741 atgcggtgcg ggcccctggt tcgaacgtga cactcgcgcc ggcaacccga gccggatcgg
     1801 gtgcggtgaa caaccggtca acacgcaccg tgccggtaaa ataatcgtcc ggcccctttg
     1861 ccgagggctg ggagcccgct cgcttgattt ccatcttccg tctccgtcat tggtgccgga
     1921 tcacccggct gatcgatccg gtatttagaa agtgcggttg tcaagaatta ggggctaaaa
     1981 tatggatgaa cctataagct gaacttctga atgcctcgca ccgacctcaa cgacatcgtg
     2041 gccttcctcg ccgttgcgcg cgaacgcagc ttcacccgag ctgccgcgca gctcggcgtt
     2101 tcacagtcgg cgctgagcca gacagtccgc ggactcgaaa cccggcttgg cctgcggctg
     2161 ctgacccgca ccacgcgcag cgtcgcgccg accgaagccg gggaccgcct gctccacgcc
     2221 gccggcccgc gcctggagga aatcgacgcc gaactgaccg cgcttaccgc gctgcgcgac
     2281 aagccatccg gcaccatccg catcaccgcg cacgaccatg ccatacgcgc cgtcctctgg
     2341 cccgccctcg aaacgcttct gccgggctat ccggatatca gagtggagat cgtcatcgac
     2401 tacgggctga cggatatcgt cgccgaacgc tacgacgccg gggtccggtc cggtgagatg
     2461 gtggcgaagg acatgatcgc cgtgcgcatc ggcccggaca tgcggtcagc cgtggtcggc
     2521 gcgccgtcct atttcgccaa acggcccagg ccaaagacac caagagacct gaccggccac
     2581 acctgcatca atctgcgcct gccaacccat ggcggtctgt acgcctggga atttcagaag
     2641 gggaagcagg agctgaaggt aagggtcgag ggccagctca tcttcaacgg caccaccccg
     2701 atgctggacg cagcactggc cggcttcggc ctggcctacg tgcccgagga tgccatccag
     2761 acccacctcg ccgccggacg cctcatccag gtgcttgccg attggtgccc accctatccg
     2821 ggctaccacc tctactaccc cagccgccgc caacccacac ccgccttcgc ccttgtggtc
     2881 gaagcactgc gataccgcgg cggtacctga ccgcgttcgt ccaccaactt gcgcctaccc
     2941 caccccggag gcaccatacc gaaccatcgg agacaacaaa catgacaggc tggagagccc
     3001 gcatcggatt cctcctaccc cccggcaacc ccaccgtgga accggaaatg acagaactcg
     3061 ccccgccggg cgtctccgtc cacttcaccc gcctgtctgc cagtggcccg gccggaaccc
     3121 atgccggcca ggaggaacgc aaccgcagcc agctcgccag cctggacgaa gccgcccgcc
     3181 tgctggcgat gctctcgccc caggtcatcg tcatggccca caccgccacc agctacacaa
     3241 tcggccgcga agccgaggca gacctggtcc gccgccagga agccgccacc ggcacccgct
     3301 tcatcaccgc cttcggcagc gtgctggaag ccttcgcctg cctcggcata aaacgggtcg
     3361 cctatgccac cccctacgac gccaaggtga cggagcaggg gcgcgcccat ctgaccttgc
     3421 atggcctgga tgtggtcaac gtcgcccgcc tggaaggcgt ccgcaacatc tatgaggaaa
     3481 ccgccgaacg cgcctatgcc gtcggcaggc aggccgaccg ccccgaagcc caggccgtgt
     3541 tcctcagtgg cgtcgggatg ccgaccttgt ccatgctcca gatgctggag gacgatctcg
     3601 gcaagccggt catctccgcc gcctcggcga tgatgtggaa cgccctgcgc atcgccggcg
     3661 tacgcgcgcc caggcaaggc tacggccgtt tgttccacac gtaagcaggg aggccacgat
     3721 gccagacccc gaacgcctcg atccgaaccg caccgccctg atcgcctacg acgtctgccg
     3781 tcgcgccctg accccatcgg accccgcacg gcgaacggcc atccgccccg tcctcgacgc
     3841 ctggatcgcc atcatcgcca ccgctcgggc cgccggcgtg ccagtgatct acacaacacc
     3901 ggtcagccgc gccgacggcg cggacgtcgt catgctaccc accgatcttt cagcggaaac
     3961 cggcgtgccg ccgctgacca acggcatcga gggcaccgca gaggccggtt ttcccgacga
     4021 aatcgcaccc cgacccgagg attacgtctt cctcaaacgc cgccccagcg ccttctacgg
     4081 caccggtgtc ggcgaactgc tgcacatgct gcggcgagac accatcatca tcggcggcgg
     4141 cgccaccaac cgaggcgtcg aaaccagcgt ccgcgaggct ttcaacttcg acctgaaaac
     4201 catcgtcgtg cgcgaatgct gttggggcag cgaccaggcc gcccacgcct acagcctcga
     4261 aaaggcgatg aagatgtatg cccggatccg tcacctcgac caggtcacgg cgatgctcgg
     4321 ccgcgcctaa gcctccatca actcatgcgt atcctgcggc gaccagacca gggtcgccgg
     4381 atcgcccggt tccgccggct tcttgtagaa ggtctgatcc ggcaccagcg ccgacacctc
     4441 atccccggcg tcagtcatca ccgcgacccg caccatcgcc ccctgatact cgaccgccac
     4501 cacttgcccg ttgacatgcg gtccatccgc cgccgacccc agccagcagc ggtccgcccg
     4561 caccgcgatc ggtccccctc cggcgcgcag cacgttgtgg ctgccgatga agcgggcgat
     4621 gaacgggctg accggccgct cgaacacgtc ccgaggatgc gccgactggc ggatatgccc
     4681 gttctccatc accaccatca ggtccgccag cgccatcgcc tcatcctggc tgtgcgtgac
     4741 gtgaatgaac gtgatcccca gttcccgctg caggcgcttc agttcctccc gcaccttgat
     4801 gcgcaggaac gggtccagcg ccgacagcgg ctcatccagc agcagcacgc gcgggcggtt
     4861 gatcagcgcc cgagccagtg cgatccgctg ctgctgcccg ccggataact gcgccggcag
     4921 ccgttcggcg aaatccgcca tatggaccaa agcgagatac tcgcgcgccc tcgcatggcg
     4981 ctccttcttc gccacgccgc gcatcttcaa actgaacgcg acattgtcga ggcaggacat
     5041 gtgcgggaac agcgcataac tctggaacat catcgccgtg ccgcgcttga tcggcggcag
     5101 gtcggagacg ttctcgccat gaatcagcac gtcgccggcg gaaaccgcct catgcccggc
     5161 gatcatccgt agcgtcgttg tcttgccgca cccgctggga cccagcaggc agcaatacgt
     5221 gccgcgcgga atgcgcagcg aaataccatc gaccgccagc gtggtgccat aacgcttggt
     5281 taccgagatc agctcgacgt cgaatcggtt atccatcacc caaccttcgc tagtgttcgc
     5341 ccgcgccgcc gctgcaaccg cagcacgacc agcaacgaaa tgaggatcgc caggaatgag
     5401 accccggtgg tcagtgtgcc gatcgcaaac agcgtcggcg acgtcgccga ggaaatcaac
     5461 gcataaatct ccagcggcag cgtgttcttc ggcccgatcg tcagcgtcgt ccgggcatat
     5521 tcgtcgtagg agagggtgaa ggcacccatc gccacgccaa tgatgcccgg cagcaggatc
     5581 gggatcgtca catggcgcaa ccgctgccag gcattggccc ccaggtcggt cgccgcttcc
     5641 tcccacgacc ggttgaagcg gttcaccaca gcgaacatcg caaacagccc gaacggcagt
     5701 gtccaggtca gttgcgcgcc cagagccgag gtgaacaggc tgggctgcca tcccaggaac
     5761 tggaatccga gaccgattcc gaaacccacc agcaggctgg gcatcaccag gctggcgacc
     5821 gcgagataga acagcacccc cgatccggga aagcgccggc gaaaccccag gccggcggcg
     5881 accgagaata cgacggtgag gatgctgacc accatcgcca gcgacagtga gcgttcgaag
     5941 gccaccggca ggttcgccat ctggcctttc tcgaacacct cccggaacca caccagcgag
     6001 gtgccgacca tcgggaaggt cacgcctccg ttggggcctt ggaacgacag cacatagatg
     6061 acgaacatcg gtccgtagag aaacagcagg aacgcgccga acaacgtcgc aagggcgtag
     6121 aaggtccagg ggcgcttgtc gctgatgcgg gcggtcattt caccagttcc ttgcgcacgt
     6181 cgacgatctt catcattgcg gcgaccagga tggcgacgaa gatcaccagc accaccgcgt
     6241 tggccgcggc gggtggatat tccatcgcct ggatctgggt ggacagcatg gatacgatgg
     6301 acgcgctttg cccgccgctc atttgccgga cgacgaagta gtcgcccatg acctgggtga
     6361 acaccaggat cgatcccagg acgatgccgg tcttggacag cggaatgacg acatcgacca
     6421 tggtgcgcca acggctggcg ccggcatcga ccgcggcctc cagcagcgcc ggatcgatct
     6481 ttgataatga attggcgatc ggcccgacca tcagcagcgt gaacagatgg acgtaggtga
     6541 cgataacggc aaagtcggag aacagcagga acgacagcgg ctgcgatgtc agtcccagcc
     6601 ccatcaggat ctggttgaat gctccgttgc gtccaaggaa cgggatccag gcgatcgtgc
     6661 ggatgatccc cgatgtccag aacgggatcg cacacagcag gaacagcacg gtccgggtga
     6721 ttttgctgcg gatatggaag atcaggaaat aggcgatgtt gaagcccagg aacagcgtga
     6781 tcgcccagac gatgaaggcg aaacgcagcg aactgacata gacccgccac gtcgcgggag
     6841 tcgtcagcag ctcccggtaa ttgtccagca ggaacgccgg atagatcccg acacggtcgt
     6901 agtcgtagaa gctgacgaca aggaacagga tcgtcggcaa cgcgaacaac acgatcagga
     6961 taagtgccag cggtccgacc tgcagccacg acaccagcca gggcggcaag cgggtcgatc
     7021 gccgttgtcc cgacgccgcg gccaaccggc tgcgcaatga gaccggcagg atcgaggtca
     7081 ggttgctgct gctcatgcgg ctattttaat ctcgttgcgg gaccgcatga gcggcatgat
     7141 gcgggtgccg aactgctcca tgccgatgac gaaatcgtcg aaggtcatca tcacgccctg
     7201 cacaccgggg accgccgcga gttcgtcgag catacgcgcc accgaggcat aggacccgac
     7261 cagcacaccc tggttggtcg gcaatttgtt ggtgcccagc agccggcggc ggttcggctg
     7321 cgcgtagatg tcggtgctgg gatcgtcctg cgcctgttcg tcacggtagg ccagcgcctc
     7381 ctgatcggtc ccggctttgt aatgctccca cttggcgttg gcggcttcat ctgtttcatc
     7441 ggcgatgatc atggtgagga tcagcgcgcc gcagtgccgt ccggtttcct gcgtggcggc
     7501 gacaagccga gcgacgctgg gggcgaccgc ggtgggggcg ttgtagccga agctggcgca
     7561 gaaattgtaa tccgcatatt gcgcggcgaa cttggtgccg gcgtcgctct gcgcggcaca
     7621 gatgatggga attttcgctg tcggtgtcgg caggcaacgg caatcgtcca tttggaagaa
     7681 gtcacccttg aagtccgacc gtcccgtcgc ccaaagttca ttcattacgg agacatattc
     7741 ggcgcaatat tcgtagcgac gcttgtagtg ttccgcgcct ggccagatgc ccatctgggt
     7801 atattcgcgc cgctgccagc cggagatgat gttcaccccg aatcgtccgt gcgaaatcga
     7861 atcgatcgtc accgccatcc gagccgcgat cggcggcggc atggtcagaa ccgcgcaggt
     7921 ggcgaacaac ttgatcttcg tggtggtcgc cgccaggccg gccatcagcg tgaacgattc
     7981 caggttatag tcccagaact gtgacggccc gccgaagcca tgcagcttga tcatcgacag
     8041 cgcgaaatcg aaaccaaagg cctccgcctt gtccacgatt gtcttgttca ggtcatagct
     8101 aggcttgtat tgcggcgacg ttgtggagat cagccagccg ttgttgccga tcgggatgaa
     8161 aacaccaagc tgcatgacgg tcgctcccgt tcaggacgta atgaattcgt tccaccgacg
     8221 ggtcaggtag cggtcttcgt ccatcaccga attccacacc gcgatgttgc ccagacgctg
     8281 ccacagcgac ccaccgtcgc gcacgttgcc ggctttttcc atgattttgc cgaacgggct
     8341 taagatgtcg gtctgggcgg gcttgccgtc gaaccagtag gcggcctcag ccggggtgag
     8401 gtatttgcgg gcggtgtccg gctgcgcgga gtagtagcct tcacgggcga tgaaggaccc
     8461 ggggaagccc gcggcgtacc agttcatgta ttcgtggaag caatcgagtt tcagcccgtc
     8521 gacatgcttc atgacgccca gcgtgtagcc ccagccgcga tagccttcct tcagcggttg
     8581 gaacgtgcag gggataccgc gagagcggac ggcggcgaca gcgggggacc acatcgactg
     8641 gatcaccacc tcacccgagg ccatcaggtt caccgactga tcgaacgacg accagaatgc
     8701 tcggaactgg ccggcgcgct tggtcgccag catcgtatcg atggttttat cgatctccgg
     8761 cttggtcatg ttgcctttgt cgccgtactt gatatcccct cgggcttcca tcgccatcgc
     8821 gatgtcgatg atgccaatgg tgggattgtc ctggatcgcc gccttgccct tgaagtcggg
     8881 gctgaggaca tcggcccagc tatcgacctt gcggccgacg aggtcgggac ggatgcccag
     8941 cgtgtcgccg ttggtgacgg tggggatgcc ggtgacgaag tcggatgccg tgccaccttt
     9001 ggtgaccttc tggccggtgg cgtcggtggc atacagcacc atgttgggcg tgatgccctg
     9061 ctggacgatt ttgcggccgt ccggatattc gcccttggtg aacagcggca gggtctgatc
     9121 ccagtatttg aactttccga cggggatgcc ctggaggacg ttgcggccga tcaggtagcg
     9181 ctggttggtc agcgcgacat cagcgcaatc gatggcgctg gcctgcgaga gaaagcgatt
     9241 cagcagatcg gcgttttcag acgcctgcat ctgcaccgtg aacccgagat ccttggttgc
     9301 ctgcgcggca atggccggga ttgcagtgac cggcggtccc gcg
//
LOCUS       DATAVD010001314         4552 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1243200, whole genome shotgun sequence.
ACCESSION   DATAVD010001314 DATAVD010000000
VERSION     DATAVD010001314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4552
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1243200"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1179
                     /locus_tag="VHX39_25080"
     CDS             <1..1179
                     /locus_tag="VHX39_25080"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX3994460.1"
                     /translation="YGIDDYQAVMRDIAGDPVLHGLINVITPTQAVVGIAGNFTGGTS
                     ASKTFFGIGLVGTDQEAMRQWNEHGASRPYVPDDRLSDPAASRGLIGRGVARMLGLCG
                     ALHVPNCPTPPPPVEAAGNVPPLDPALADLAHSEQNAAPAAGEAPQIDLLSATANGAP
                     NIVSLEVAGVDTQSVKELDDNYVAMPLALAQQLVYGRGEHKVTGIVLQLHRTEDVPAA
                     RSRLLALIADHKLPLEVRDFRELNPFFVQVVALFSLIFLFLALIMVMIVLFAVVNTMT
                     MNVLERTAEIGTVRAMGVRRASIRRLFLAEGAVLGALGASLGVIVAFIAIVLVNHSGW
                     QWTPPGNTDPIPFQLAWPTRPVLLLGTWLGLVVVATLATLPPANRAARSRIVDALRHV
                     "
     gene            1172..1954
                     /locus_tag="VHX39_25085"
     CDS             1172..1954
                     /locus_tag="VHX39_25085"
                     /inference="COORDINATES: protein motif:HMM:NF028441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein-sorting protein"
                     /protein_id="HEX3994461.1"
                     /translation="MSKHLTRRWVLLAAALVAGAGEARAQSAHDIIASADRVRNPGQP
                     FRTITTLTEYVRGKAGDQTVLAVYSKEDKTSGQFRNLVRYVQPPRDAGKMALLDGQNL
                     WFYDPAAKSSVRISTQQRLVGQAAIGDVLTINFAVDYSGTLLGDETITDPDHQARNCW
                     HLDLRAATSTAVYSRAEYWVEHGSFWPIKAKFYSDSGRVLKVLYYRGFTQRLGAVRPS
                     GAVIIDAVDSTLVTTVQFDNPTFQDIPDFWYQRDYLPRLRPE"
     gene            1951..3354
                     /locus_tag="VHX39_25090"
     CDS             1951..3354
                     /locus_tag="VHX39_25090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994462.1"
                     /translation="MMRLAVVVLLFGLIAAPLALAADEDSDLNRIPTDSPQATAPVQP
                     AASSKDVNYIADAQQLTATRNGLAVPFPSPQPASWENWLFLDTRDEWSLGDAWRLNYS
                     GRLNVRTSNEIPFPTHENVRNDLRELFVEWQPTDSAWLELGRVNIRNGVALGFNPTDF
                     FRPRTVIEPLTADPSVLREDRLGVLMLTGQWLWSFGSITVAYAPKVIRPTPIYNIRTE
                     QGFDPDLGQTNSDDRVLVKASLNLPNAFNPELLYYHAGTRTQIGTNLTTSIGRSTVAY
                     LEWSGGVRSDLIADAFRFGATTGSLPASAMRLLPNNADASFMNDLSLGVSYATENRVT
                     INLEYHFHQAGLSPQDWRHWFNTSAQRGSVPGVNAALWYLRSYAQDQQEPADRHAAFV
                     RLGWQDAFVTNLELTALATVNLQDASAFLQATAEYHVSRTWTVAGLVGGTVGGRHSEY
                     GSLPGLASALLRVNRYF"
     gene            complement(3367..3873)
                     /locus_tag="VHX39_25095"
     CDS             complement(3367..3873)
                     /locus_tag="VHX39_25095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007090103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX3994463.1"
                     /translation="MADMTPPAGDPNLSVPVDEIRLAQDLLFFAYRDFTNAADMILEE
                     LGLGRAHHRAMHFIGRHPGITVTELLSILRITKQSLARVLSELIDRGYVAQSPGVGDR
                     RQRLLHLTDAGKALERRLFERQQACLAEAFHTAGPDALTGFRQVMRGIMDESARAWVD
                     LGLRRADK"
     gene            3981..>4552
                     /locus_tag="VHX39_25100"
     CDS             3981..>4552
                     /locus_tag="VHX39_25100"
                     /inference="COORDINATES: protein motif:HMM:NF017215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3994464.1"
                     /translation="MAWRIGIDIGGTFTDVAMVDEAGGRIGIAKVLTTPHDFGQAVIE
                     GVSQGLAQHGIDPGDVSLLSHATTVVTNALLEHKGARAGFIATRGFRDLLELRRSSRI
                     DLYDLFQDAPSVLVPRRWRYEITERIDAQGEVVMPLVEQEVAEIAAAIRDAGLQTVAV
                     SLMFSFLNDTHERRLGARLRDALPDVAVFLS"
BASE COUNT          850 a         1388 c         1416 g          898 t
ORIGIN      
        1 tacgggatcg acgattatca ggctgtgatg cgggacatcg ccggcgatcc ggtgctgcac
       61 ggcctcatca atgtgatcac cccgacgcag gcggttgtcg ggatcgccgg taactttacc
      121 ggcggcacca gcgcatcgaa aacgtttttc ggcattggcc tcgtgggcac ggatcaggaa
      181 gcgatgcggc aatggaacga acacggcgcg agccggccct atgttcccga cgaccggctc
      241 agcgatccgg ccgcatcgcg ggggttgatc ggtcgcggcg tggcccggat gcttggcttg
      301 tgcggtgccc tgcacgtgcc aaattgcccg acaccgcccc ctcccgttga ggctgccggc
      361 aacgtgccgc cacttgaccc cgcactggcg gatctggcgc attctgaaca gaacgcggcg
      421 ccggctgcag gcgaggcgcc gcagatcgac ctgttgtcgg cgaccgcgaa tggcgcaccg
      481 aacatcgtca gcctcgaagt tgccggagtc gatacgcagt cggtcaagga gctggacgac
      541 aactatgtcg cgatgccttt ggcgctggca cagcaactcg tctacggccg gggcgagcac
      601 aaggtgaccg ggatcgtcct gcaattgcac cggaccgagg acgtgccggc ggctcgttcc
      661 cgtctgctcg ctctgatcgc cgaccataag ttgccgttgg aagtgcgcga cttccgcgag
      721 ctgaacccat tcttcgtcca ggtggtcgcg ttgttcagcc tgatattcct gtttcttgca
      781 ctgatcatgg tgatgatcgt gctgttcgcg gtggtgaaca cgatgacaat gaatgtgttg
      841 gaacggacgg cggaaatcgg cacggtgcgg gcgatgggcg tgcggcgggc cagcatccgg
      901 cgactgtttc ttgcggaagg cgcagtcctc ggtgccctgg gcgcatcgct cggcgtgatt
      961 gtcgcgttca ttgcgatcgt gctggtcaat cacagcggat ggcagtggac gccgcccgga
     1021 aataccgatc cgatcccgtt ccagcttgcg tggccgacac ggccggtgct gctgctcggt
     1081 acctggcttg gcctggttgt ggtggcgacc ctggccacct tgcctccggc caaccgagcg
     1141 gcgcgcagcc ggattgtgga tgccctgcgc catgtctaaa catttgacac gacgttgggt
     1201 tctgctggct gccgcgcttg tcgccggggc tggtgaggct cgtgcccagt ccgcacacga
     1261 catcatcgcg agtgccgacc gggtacgtaa tccgggccaa ccattccgaa caataacaac
     1321 cttgacagaa tacgtgcgtg gcaaagcggg cgatcagacc gtgctggccg tctattccaa
     1381 agaagacaag accagtggcc agtttcgcaa tctggtgcgc tacgtgcagc cgccgcgcga
     1441 tgccggcaag atggcgctgc tggacgggca aaatctttgg ttctacgacc cggcagccaa
     1501 atcgagcgtg cggatatcca cccaacagcg gctggttggg caggccgcaa tcggcgacgt
     1561 cctgacgata aatttcgcag tcgattattc cggcacgttg ctcggcgacg aaacgatcac
     1621 ggacccggac catcaggcac gcaattgctg gcacctcgat ttgcgcgctg caacctcgac
     1681 cgcggtctat agccgagcgg aatactgggt cgaacacggc tcattctggc caatcaaggc
     1741 gaaattttat tccgacagcg gacgggtgct caaagtgctg tattatcgcg gcttcacgca
     1801 gcggctcggc gcggtgcgtc cgagtggcgc ggtgatcatc gatgctgtcg actcgacatt
     1861 ggttacgacg gtgcagttcg acaatccgac gttccaggac attcctgact tctggtacca
     1921 gcgcgattat ttgcccagac tgcggccgga atgatgcgcc tggcggttgt cgttttgttg
     1981 tttggcctga tcgctgcgcc actggctttg gccgccgatg aggacagcga tctgaaccgc
     2041 attccgacag acagtccgca ggcgacggcg cccgttcaac cggccgcttc atcgaaagac
     2101 gtgaattata ttgccgacgc ccagcaattg actgcgacgc gcaacggtct cgcagtgccg
     2161 tttccgtcgc cgcagccggc gagttgggaa aactggctgt tcctcgatac gcgcgacgaa
     2221 tggagcctcg gcgacgcatg gcggttgaat tatagcggcc ggctgaatgt ccgcacctcg
     2281 aacgaaatcc catttcccac ccacgagaat gtgcggaacg acctgcgcga attgttcgtg
     2341 gaatggcagc cgaccgactc ggcatggctg gaactggggc gggtcaatat ccgcaatggc
     2401 gtcgcactgg gtttcaaccc caccgatttc tttcgccccc gcactgtaat cgagccattg
     2461 accgccgatc cgtccgtatt gcgtgaggat cgtctcggcg tgctgatgct aaccgggcaa
     2521 tggctttgga gtttcggttc cattacggtg gcgtatgcac cgaaggtgat ccggccgacg
     2581 ccgatttaca acattcggac ggagcagggt ttcgatcccg acctcggtca gacaaactcc
     2641 gacgaccggg ttctggtgaa ggccagtctg aacctgccca acgcgttcaa tccggagttg
     2701 ctgtattatc acgcggggac ccgcacgcag atcggcacca atctgaccac atcgatcggc
     2761 cggagcactg tggcgtatct ggaatggtcg ggcggcgtgc gctcggacct gattgccgat
     2821 gcgtttcgct tcggcgcgac gaccgggtca ctgcccgcct cggcaatgcg gctgctacca
     2881 aacaatgcag atgccagctt catgaacgac ctctcgctcg gggtttccta tgccaccgag
     2941 aaccgggtca caatcaacct ggaatatcat ttccatcagg ccgggttgtc gcctcaggac
     3001 tggagacatt ggttcaatac ctcagcgcaa cgtggctccg ttccgggtgt gaatgccgca
     3061 ttgtggtatc tgcgctccta cgcacaggac cagcaggagc cagccgatcg tcatgcggcg
     3121 ttcgtgcggc tgggttggca ggatgcgttt gtcacgaatt tggaactgac tgcactggca
     3181 acggtcaatt tgcaggatgc gtccgcgttc ctgcaggcca ccgccgagta tcatgtgtca
     3241 cggacatgga cggttgccgg cctggttggc ggaaccgttg gcggacgcca ttccgaatac
     3301 ggcagcttgc ctgggcttgc cagcgcctta ctgcgcgtca accgatattt ctgaacgacg
     3361 accggactat ttgtcagcac ggcgcaggcc caaatcgacc caggcgcgag cgctttcgtc
     3421 catgatcccg cgcatgacct gacgaaatcc tgtgagcgca tctggacccg ccgtgtgaaa
     3481 tgcttccgcg aggcaggctt gttgccgctc gaacagccgc cgctccaatg ctttgcccgc
     3541 atcggtcagg tgtaacaatc gctgccttcg gtcacccact cctgggcttt gcgcgacata
     3601 gccgcggtcg atgagttcgc tcagcacgcg cgccagcgat tgtttggtga tacgcaggat
     3661 cgacagcagc tcggtgaccg tgatgccggg gtgacggcca atgaaatgca tcgcccgatg
     3721 gtgtgcccgg ccaaggccga gttcctccag gatcatgtct gctgcgttgg tgaagtcgcg
     3781 ataggcgaag aacaacaaat cctgcgcaag gcggatctcg tcgacaggaa cggacaaatt
     3841 tggatcaccg gcggggggcg tcatatcggc catgatagcc agtacgcagc cgaaagcgaa
     3901 ccgaatgcag cttgcgtccc tgcgatggcg ccgccaaaac cggaaacagc aacctgtgaa
     3961 ccgggataag gggcaactgc atggcctggc ggatcggcat cgacattggc ggcaccttca
     4021 ccgacgtggc catggtcgac gaagccggcg gacgcatcgg catcgccaaa gtgctgacca
     4081 caccgcacga cttcggccag gcggtgatcg aaggcgtcag ccagggcctg gcgcaacacg
     4141 gcatcgaccc cggcgatgtc tcgttgctgt cccacgccac caccgtcgtc acgaacgcac
     4201 tgctcgagca caaaggcgcg cgggcaggct tcatcgcaac gcgcggcttt cgcgacctgc
     4261 tggaactgcg ccgttcctca cggatcgacc tgtacgactt attccaggat gcgccttccg
     4321 tgctggtgcc tcgccgttgg cgctacgaga tcaccgaacg gatcgacgcc cagggcgagg
     4381 tggtgatgcc gttggtggag caggaggttg ctgaaattgc cgctgcgatc cgtgacgccg
     4441 gattacagac ggtcgccgtc tcgctgatgt tctcgttcct caacgatacc cacgaacgcc
     4501 gcctcggcgc acgattgcga gacgccctgc ccgatgtcgc ggtgttcctg tc
//
LOCUS       DATAVD010001315         2405 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_498448, whole genome shotgun sequence.
ACCESSION   DATAVD010001315 DATAVD010000000
VERSION     DATAVD010001315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_498448"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..323
                     /locus_tag="VHX39_25105"
     CDS             <1..323
                     /locus_tag="VHX39_25105"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994465.1"
                     /translation="AALGSGRAYLTEILRDVWDHADDIAPIDTEARIRVRLGCAQAIK
                     SAIETADYVYKAAGVSAIFKGTPFERRFRDMHTLSQQIQSRDAHFEMVGKIMFNGDPD
                     GLFL"
     gene            353..781
                     /locus_tag="VHX39_25110"
     CDS             353..781
                     /locus_tag="VHX39_25110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HEX3994466.1"
                     /translation="MAAITLAQAQTIVSAGLAFCREKKFSPMAIIVLDARGVPKAYGA
                     EDGTALRRYDIAHGKAYGALAMGVGSKTLGARAVERPHFLAAVNGAIGGAMVPVAGGV
                     LVRIDGEIVGCVGVTGDSSDNDELAARAGIAAAGLTGDPS"
     gene            843..1541
                     /locus_tag="VHX39_25115"
     CDS             843..1541
                     /locus_tag="VHX39_25115"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEX3994467.1"
                     /translation="MQKNVFECFGRRIELWTHPEPDHLARVIRSQRTFYEIDLLMKCR
                     EIYLPNTRIIDVGANIGNHSVFFSAILNAPVYAFEPFPPNYALLELNIAANGLDDRIV
                     ASCCAVGEAVGMATLQPGPPANFGTTRVVAGAGETLVRSLDSLDIPGPISLIKVDVEG
                     EELPVLRGAEALIQAWLPDLVIEAGTPQAFRCLADAMLRFGYVPRGRFAATPTWLFSA
                     ADQISRMRHVLTAI"
     gene            complement(1554..>2405)
                     /locus_tag="VHX39_25120"
     CDS             complement(1554..>2405)
                     /locus_tag="VHX39_25120"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3994468.1"
                     /translation="ICAADGHMVRRTDRSLCDRASPVRCHQCLPDHSREDFLLRKLWM
                     ERNLSPVDHFTCPSRFMIEHYVNWGIARERISHVTNGERSRVIRPMLTPREGPRNRFG
                     FFGLLHDDKGVTILLRAVTRLREAGFTGFSIDINGGDIRHASPPVRSEIETFQETEQH
                     LPPAQRIVAFNGAYSLDQIQSRMTRVDWTIVPSVWWEIFGLVISESWMFGRPVICSNV
                     GGMAERVSHEVDGLHFEMGDPAALAATIRRACTEEGLWERLHAAVPDPPSRAAMADGF
                     LALYDAA"
BASE COUNT          457 a          759 c          731 g          458 t
ORIGIN      
        1 aggcagcact tggttcggga cgcgcttatc tgaccgagat tcttcgcgat gtctgggacc
       61 acgccgacga cattgccccg atcgacaccg aagcccgcat ccgggtacgg ctgggttgtg
      121 cacaagccat caaatcggcc atcgaaacgg cggattacgt ctataaggca gcgggtgtct
      181 cggcaatctt caagggcaca ccgttcgaac ggcggtttcg cgacatgcac acgttgtcgc
      241 aacaaatcca gtcgcgcgat gcgcacttcg aaatggtcgg caagatcatg ttcaatggcg
      301 atccggacgg attgtttctg taggtttcac gttatcgggg aaggactctg acatggccgc
      361 aatcactttg gcgcaggcgc agacgatcgt ttcggcaggc ctggcgttct gccgcgaaaa
      421 gaaattcagt ccgatggcga tcatcgtgct ggatgctcgc ggcgtgccaa aagcctatgg
      481 cgccgaggac ggcactgcgc tgcgtcgcta cgacatcgca cacggcaagg cctatggcgc
      541 gctggcgatg ggcgttggct cgaagaccct cggcgcacgc gcggtagagc ggccgcactt
      601 cctcgccgcg gtcaacggcg ccatcggcgg cgccatggtg ccggtcgccg gtggcgtgct
      661 ggtccgtatc gatggcgaga tcgtcggctg cgtcggtgtg accggcgata gttctgacaa
      721 tgacgaactc gccgcgcggg ccggcatcgc cgcggccgga ctgaccggcg atccaagctg
      781 agcggcacgt tgtaaggcgc cgcattagcc ctgcgttaac cgccgttgcc tacattgcgg
      841 cgatgcaaaa gaacgtcttc gagtgctttg gccggcgcat tgaactctgg acccatccgg
      901 agccggatca cctcgccagg gtgatccgca gccagcggac attttacgaa attgatctgc
      961 tgatgaaatg tcgggagatc tatctgccaa acacacggat catcgatgtc ggcgccaaca
     1021 tcggcaacca ttcggtgttt ttctcggcaa tcctcaacgc accggtctac gcgttcgaac
     1081 catttccgcc aaactacgcc ttgctggaac tcaacatcgc cgccaatggc ctggacgatc
     1141 gtatcgtcgc gtcttgctgc gccgttggtg aggccgttgg catggcaacc ctgcagcccg
     1201 gtccaccggc caatttcggc accacaaggg ttgtcgccgg cgccggcgag acactggttc
     1261 gcagcctcga cagcctcgac attccaggtc ccatcagcct gatcaaggtt gacgtggaag
     1321 gggaggaatt gccggtgttg cgtggtgctg aggcgctgat ccaggcatgg ctgccggacc
     1381 ttgtgatcga ggcagggacg ccacaggcgt ttcgctgtct cgccgatgcc atgctgcggt
     1441 ttggctatgt gcctcgcggc cgctttgctg cgacaccgac ctggttgttt tcggcagccg
     1501 atcagatttc ccggatgcgg cacgtcctga ctgcgatatg attgcagcga gttttacgcc
     1561 gcgtcgtaca gcgccagaaa cccatccgcc atggccgcgc gcgacggtgg atccggcacc
     1621 gccgcatgca gtcgctccca caatccttcc tcggtgcagg cgcgccggat cgtcgcggcg
     1681 agcgcagccg gatcgcccat ctcgaaatgc agcccatcga cctcgtggct cacccgttcc
     1741 gccatgccac cgacattcga gcaaatcacc ggccggccga acatccacga ctccgaaatg
     1801 accaggccga aaatctccca ccagaccgag ggcacgatcg tccaatcgac ccgcgtcatg
     1861 cgcgactgga tctgatccag gctataagcg ccattgaacg caacgatgcg ttgcgccggc
     1921 ggcagatgct gctcagtttc ctgaaacgtt tcgatctcgc tgcgcaccgg cggcgaggcg
     1981 tgccggatgt cgccgccatt gatgtcgatg ctgaacccag tgaaccccgc ctcgcgcagc
     2041 cgtgtcactg cgcgcagcag gatcgtgacg cctttgtcat catgcaacaa cccaaaaaaa
     2101 ccaaaccggt tgcgcggccc ctcccgcggt gtcagcattg gccggatgac acgcgagcgc
     2161 tcgccattgg tcacgtggct gatgcgctcg cgcgcgatgc cccagttgac gtaatgctcg
     2221 atcatgaagc ggctggggca ggtgaaatga tcgaccggac ttaggttgcg ctccatccag
     2281 agcttgcgca gcaggaaatc ctcccgcgag tggtccggca aacattgatg gcaacgtacc
     2341 ggactggcgc gatcgcacaa ggatcggtct gtgcgccgga ccatgtgccc gtccgcggcg
     2401 caaat
//
LOCUS       DATAVD010001316         1504 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_685584, whole genome shotgun sequence.
ACCESSION   DATAVD010001316 DATAVD010000000
VERSION     DATAVD010001316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_685584"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(101..>1504)
                     /locus_tag="VHX39_25125"
     CDS             complement(101..>1504)
                     /locus_tag="VHX39_25125"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3994469.1"
                     /translation="WRGRGGTHRDDGCIAGAPSDLAPPYESRYGTIRWWRRCQVRLIV
                     TVATCRRISYSGPRPSKDRTVMPEPTMGQPAGPLKGFRILDLTTVLFGPFGTQTLGDW
                     GAEIIKVETLTGDTWRTSGQFRNRGMSGQFMAANRNKRSIALDLKHPDGAAVLRQLIT
                     KADALVSNIRPAGLARLGFSYDTCKELNPRLVYASATGFGQNGPWAARPAFDEIIQAA
                     SGFASAMGTDEEPAFVPSLVGDKICGMALTSAVTAALLHRERTGEGQMVEVPMLETLA
                     AFNSIEMFGGLAFVPPIGPSGYRRMKARRPVRTKDGWLTMLPYSGANWCAFFEEVGHP
                     ECIEEFSVRDPVLRARNIDKIYDRMREIAPSRTTAEWETLLLRIDVPHTAFAKLTEIA
                     EQPHLKAVGMFPEIEHPTEGKIRQARPPARFSASPAGIHRMPPRLGEHSREILREAGY
                     AQEDIDRLVETKAVGAS"
BASE COUNT          250 a          450 c          517 g          287 t
ORIGIN      
        1 ccacccgaag aactgcaaaa tgccgacttt cattttctct cccgcgtggg cttaaactgg
       61 ccgatgatgg ttcagatcgg atcccggtcc aactccgggc ttacgacgcc cccaccgcct
      121 tcgtctcgac caacctgtcg atgtcctcct gggcgtagcc ggcctcgcgc aatatttccc
      181 gcgagtgttc gccaagccgc ggcggcatcc ggtgaatgcc ggcaggactg gcagagaagc
      241 gcgccggcgg gcgggcctgg cggatttttc cttcggtcgg atgctcgatc tccgggaaca
      301 tgccgaccgc tttcagatgg ggttgctcgg caatttcggt cagttttgca aaggcggtgt
      361 gcggcacgtc gatccgcagc agcaacgtct cccattctgc cgtggtgcgg gagggtgcga
      421 tttcgcgcat ccggtcgtag attttgtcga tgttgcgggc gcgtaacaca gggtcacgca
      481 cggaaaattc ctcgatacat tccgggtggc caacttcctc gaagaacgcg caccagttgg
      541 cgccggaata gggcagcatc gtgagccagc cgtctttggt ccgtaccggc cgtcgcgctt
      601 tcatgcgccg gtagccggat ggcccgatcg gcgggacgaa ggcgagaccg ccgaacatct
      661 cgatactgtt gaacgcggcg agggtttcca gcatcggcac ttcaaccatc tggccctcgc
      721 cggtgcgttc gcgatgcagc agagcagcgg tgacggcgga ggtcagcgcc atgccgcaga
      781 tcttgtcgcc gacgaggctg gggacgaagg cgggctcctc atcggtgccc atggcggagg
      841 cgaagcccga cgccgcctgg atgatttcgt cgaacgccgg acgggcagcc cagggaccgt
      901 tttggccgaa gccggtggcg gaggcgtaga cgaggcgggg gttgagttct ttgcaagtgt
      961 cgtaactgaa gccaagacgg gcgaggccgg cagggcggat gttggagacc agggcgtcgg
     1021 ctttggtgat cagttggcgc aacacggccg ctccgtcggg gtgcttcagg tcgagcgcga
     1081 tgctgcgctt gttgcggttg gcggccatga actggccgct catgccgcgg ttgcggaact
     1141 ggccggaggt gcgccaggtg tcacctgtga gcgtctcgac cttgatgatc tcggcacccc
     1201 agtcgcccag ggtctgcgtg ccgaacgggc caaacagcac ggtggtgagg tcgagaatgc
     1261 ggaagccttt gagcggtccg gcgggttgtc ccatcgtggg ttcgggcatg acggttcggt
     1321 ccttggacgg tcttggtcca gaataggaaa tcctgcggca ggtggcgacc gtgacgatca
     1381 accggacctg acagcgtcgc caccaccgga tcgttccata gcgggattca taggggggcg
     1441 cgaggtcact tggcgcgccg gcgatgcagc catcatcgcg atgcgttccc cccctgcccc
     1501 gcca
//
LOCUS       DATAVD010001317         1524 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_498711, whole genome shotgun sequence.
ACCESSION   DATAVD010001317 DATAVD010000000
VERSION     DATAVD010001317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_498711"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..905
                     /locus_tag="VHX39_25130"
     CDS             <1..905
                     /locus_tag="VHX39_25130"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEX3994470.1"
                     /translation="LPANTALSERDPTQPAWNEATDHAWQAYRMQVYAAQIEALDRGV
                     GRIVEALQNAGKFANTLFVFLSDNGASAEELPLFGEARFSHRKDIVPRRAKDGSPIRI
                     GNTPDIVPGPDDTYASYGQAWANLSNTPFRFYKRWVHEGGIAAPLIIHWPAAQLDAGA
                     VVDHPFQLVDIAPTLIEATGAHYPPKSVTWRVAALEGRSMLAALRGGPFDPVPLYWEH
                     TGNAAIRLHKWKLVREYPSDWELYDIEADRTELNNLAARFPAVVADLIARWEQWAARV
                     GVLPWETMLQIYRERGLADVYAAG"
     gene            complement(945..>1524)
                     /locus_tag="VHX39_25135"
     CDS             complement(945..>1524)
                     /locus_tag="VHX39_25135"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HEX3994471.1"
                     /translation="RYVPGANWRHPDGPETTISARDHDPVVQIAWPDAVAFAAWSGKR
                     LPSEAEWEYAARGGLDGATYCWGEQLTPDGRWMANIWQGDFPRANTALDGFAGRSPVC
                     LFPANGYGVCDMAGNVWEWTATEYTSRHTERPSPCCHERSGEATTPRKLIKGGSYLCA
                     PNYCLRYRPAARQPQSVDTASCHIGFRCVRDG"
BASE COUNT          304 a          497 c          456 g          267 t
ORIGIN      
        1 tcctgccggc gaataccgcc ctcagcgaac gcgatccgac gcagccggcc tggaacgaag
       61 caaccgatca cgcatggcag gcttaccgaa tgcaagttta tgccgcgcag atcgaagccc
      121 tcgaccgcgg tgtcgggcgc atcgtcgagg cattgcagaa cgctggcaaa ttcgcaaata
      181 cgctgttcgt atttctgtcg gacaacggcg cctcggcaga agaattgccg ctgttcggcg
      241 aggcacgttt cagccaccgg aaagatatcg tgccgcgccg ggcaaaagac ggatcgccaa
      301 tccgcatcgg caacacgccg gatatcgtcc ccggtcccga cgacacctat gccagctacg
      361 gccaggcctg ggccaatctc tccaacacgc catttcgttt ctacaaacga tgggtgcatg
      421 aaggcggcat cgccgcaccc ctgatcatcc attggccggc ggcgcaactc gatgccggag
      481 cggtcgtcga tcacccattc cagcttgtcg atatcgctcc caccctaatt gaagcaaccg
      541 gcgcgcatta tccgccaaag tccgtgacct ggcgcgtcgc cgcactggag ggacgcagca
      601 tgctggcagc gctgcgtggc gggccgttcg atcctgtgcc gctgtactgg gaacataccg
      661 gcaatgcggc aatccgcttg cacaagtgga agcttgtgcg ggaatacccg agcgactggg
      721 agctttacga tatcgaagcc gaccggaccg aactcaataa ccttgccgca cggtttcccg
      781 cggtcgtggc ggaccttatc gcgcggtggg aacaatgggc cgctcgcgtt ggcgtgctgc
      841 cctgggaaac catgttgcag atttatcggg aacgcggtct cgccgacgtt tatgccgccg
      901 gatagtaacc ggtatcgatg gcaacgaaat cgcgatggcg gtcactagcc atcgcgtacg
      961 caacggaacc cgatgtgaca gctcgcagta tcgacagact gcggctgccg cgcggcaggc
     1021 cgatagcgca ggcagtagtt cggcgcacac aaatacgagc cgcccttgat gagcttccgt
     1081 ggcgtcgtcg cctcgccgga acgttcgtga cagcaaggcg acggccgttc ggtgtggcgg
     1141 gaggtgtact cggtggcagt ccactcccag acattccccg ccatgtcgca gacgccgtaa
     1201 ccgttcgccg gaaacaagca cacgggcgaa cggccggcga aaccgtccaa cgcggtgttc
     1261 gctcgaggga aatcgccctg ccagatattt gccatccagc gcccgtcggg agttaattgt
     1321 tctccccagc aatacgttgc gccatccagc ccaccgcggg cagcatattc ccactccgcc
     1381 tcgctcggca gccgcttccc ggaccatgct gcaaaagcca ctgcgtccgg ccaggcaatc
     1441 tgcaccaccg ggtcgtgatc gcgagcggaa atcgtggttt ccgggccgtc cggatggcgc
     1501 cagttcgcgc cggggacata tcgc
//
LOCUS       DATAVD010001318        10135 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3288258, whole genome shotgun sequence.
ACCESSION   DATAVD010001318 DATAVD010000000
VERSION     DATAVD010001318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10135
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3288258"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..568
                     /locus_tag="VHX39_25140"
     CDS             <1..568
                     /locus_tag="VHX39_25140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994472.1"
                     /translation="MLLELDRGIDLLALGSLTSEGGPTEWRAMAFWSIIYVIYNLVTN
                     GPDFFGKTGPIPDYVAIAPPKFIDDLRQIQADYKTATLNVKGLDRTFVRYFLIPSTTA
                     PLHPLDERQQRGLAEELRVQESLEERWENLVRTVSVEAGDQQYVFRLLKLVIRQAAYE
                     AKVGKLPRMVAALPQQYEQSLDIIARKV"
     gene            655..1422
                     /locus_tag="VHX39_25145"
     CDS             655..1422
                     /locus_tag="VHX39_25145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994473.1"
                     /translation="MIVPAALSGLRELLLHDEVHRTLIGISAVRTLLLAELVEHVKIA
                     CKDHRHLVDYITLATPGSGGAPSVVPSLSGTPPGGTSPGGTAGATGVTGQNAAGAAPP
                     AHGAPTEPAPSQFVTEFGDKMAAVVRMPIEQLRTTVDSHGEAIDKGAAGILELQAAKT
                     ASDARAQALEASFLRLDTAHRGLSARVAEMGFEQDEMEEATATLREAAREVEPLIIAV
                     VEEGGNRGSGEHGRKTQARPMRQAGAPFRKAQARKKK"
     gene            1474..2589
                     /locus_tag="VHX39_25150"
     CDS             1474..2589
                     /locus_tag="VHX39_25150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994474.1"
                     /translation="MTIQQTETIQRLWDRFIRDQLANVPPEDRQAYAQQFEERLADLS
                     ERGAEAAGGGDGFLDMIGVGPKGPVGFEEIAYPYLKPDFDYSYVSSQLHASAELYFIY
                     QYERSKVFQVVNVLLRLFHSGSIKLTRGPGAKGLYLLEKWQPQRYSLRHREAAYRRAF
                     NYGGNASTQSGVVNRNFHRQLVGFMGAVAQYLRDLRIGDVIRGGQQIGSRAFGSVATV
                     QRLGLDLRYALNRATYGSIYALSMETGHYLKQVLTLLDAPDIKKAFDANTRWNVVESV
                     SQRYLGGMADISQRAKMAESGRRILLFVADHDFKTGIDPSLFQTEMGQIGQHAEAWLA
                     AYRMTHEGRGFVDATPPAHDVFGTKVRRELQPAFADL"
     gene            2629..3489
                     /locus_tag="VHX39_25155"
     CDS             2629..3489
                     /locus_tag="VHX39_25155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994475.1"
                     /translation="MVRSLEPDLSVHISRRRWRCVVDPYLCLSLDGAAFIRGLAGHAE
                     IWLGPEFLNILDSWLLYDREPSALMWSKDGGPDADEVRQALRIWQGLRDSAGPGSGRL
                     CWVRDAVRESCLPAGMDESLVPHWEAMAEALDERLSRAVEASGPMVAATRDAAALSAL
                     LPGSVLLCRGGQADPPLCHHLKAWRLPCRRLELIDDLVSIERGLLMQMLVEAGLAGHL
                     WSGLNLVVVHIVAPGHSRLSLGHDFAGGGEDGGFLAELEPRPVKGAWEDALAFWYDLA
                     GENYGDKWER"
     gene            3533..4483
                     /locus_tag="VHX39_25160"
     CDS             3533..4483
                     /locus_tag="VHX39_25160"
                     /inference="COORDINATES: protein motif:HMM:NF025858.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4438 domain-containing protein"
                     /protein_id="HEX3994476.1"
                     /translation="MGQIAHPVGRANPYRIGQDGVPRVLPGTGGISLSCRIGDACVGL
                     AVDHVEPGVALHNNGREIIGAANGPNMALLTSACVGNPARVATGPAKGAIGMVTGKHG
                     GVDHVLVDFDKKTLYRLNIGDKIQIYACGLGLQLPDFRQITVTNCAPGLLRRWKPRGR
                     NGVLEVRVTHMVPAAIIGSGLGKNNVWRGDFDIQLFDEPTRRRHHLDTLRFGDLVAVL
                     DSDARFGAAWRGGRVTIGVVVHSDSTTAGHGPGVTPLLTGPASCLRPVCDSSANIAFL
                     YQRRAVLPPRARQPFSGRILPAAPKIRQQVSTFRDKMAFT"
     gene            4622..5089
                     /locus_tag="VHX39_25165"
     CDS             4622..5089
                     /locus_tag="VHX39_25165"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX3994477.1"
                     /translation="MAEQSTAGGLVSVRNGHDRSHIRQVGRIELGDRQFIVTLASDLH
                     SDAEHTQICRFELGGFGLMVIEDGHKDDTMDDVVARLTSRELEIAILVAQGHANKNIA
                     YRLRISEWTVATYLRRIFAKLNVESRAAMVFRCAPLITASLEPVRGRSADYMR"
     gene            complement(5109..5714)
                     /locus_tag="VHX39_25170"
     CDS             complement(5109..5714)
                     /locus_tag="VHX39_25170"
                     /inference="COORDINATES: protein motif:HMM:TIGR02118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EthD family reductase"
                     /protein_id="HEX3994478.1"
                     /translation="MIAAISLIRRQDSVDAATFRRHWLGVHGPLVCKFAGLRRYTQCH
                     VVDPTPPNATRIDGFPLLFFANEADRQHAHASPEMAACNVDSRQFIGAVSRVMAQPVE
                     MVPRSASAGQTGLIAVYPESTAATAHLLELQSQPGLRGLTRYHVLEQGPAPNSTVPHL
                     KVAVGLMAQAWFDSMIDVRAALATRNTAGASLFVVEEHRLL"
     gene            complement(5711..6877)
                     /locus_tag="VHX39_25175"
     CDS             complement(5711..6877)
                     /locus_tag="VHX39_25175"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEX3994479.1"
                     /translation="MLKTTSNLVLPTAITGSYPRPLWFDMSLGGRSFKAALGESLFRE
                     QYMDAVAAIINAQEAAGLDIVTDGDSRFDLAVGGKSWFFYPIERLGGINGHRDTSRGW
                     MGRHDLRPGKILWEVQEAYQPSIVSGKLTRGPWEYSALWQVAQRLTDRPVKFGAICAP
                     ALASMLWNEFYTDDKAMILDLCDIMNAELRELADAGCPLIQVEEPPHHGRSLRPDCTD
                     ADLEFLTEAFNRQLVGVDAEIWVHTCWGNPNQQRVYWEVPSYERAMPHLLQLNADVIT
                     FECASSDGKDLHLFGKYKTDKKIGIGVVNHCNTVVEPPEYVASLIRRALEFIPPERLV
                     ITTDCGFGREGLSRRIAYYKCVSLVEGTNIVRRELGLPEARVRASDPALYFGKR"
     gene            7022..8125
                     /locus_tag="VHX39_25180"
     CDS             7022..8125
                     /locus_tag="VHX39_25180"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX3994480.1"
                     /translation="MTSQNKIRVGIVGASAGRGFASIAHVPALKALPDFEIVAVGTTR
                     QESADAAARHYGARLAFADAGELARHPDVDLVTVCVKAPDHYGPVMAAIEAGKHVYCE
                     WPLGRNTEEAIRMHAAAERAGVRHAIGLQGRVSPSISYVKDLIADGYIGRVLSGTMFV
                     NAANWGATLSEAYQADRTNGANLMTITGGHNLDALCYCLGEFHQLAAFVVSQRDQIKL
                     QATGEMTPKTSPDQLLVSGIVGDGAAVSFQVRGGMSRGLEFLFEIHGEMGDLVLEATT
                     RASTQRQELSVRGARGAGTPLAELDIPGKYRWVPDATPRESPYNVAQLYAALGAAIRD
                     DKPAVPGFDAAVTRHHMLDMITRASETGQTQTA"
     gene            complement(8158..8742)
                     /locus_tag="VHX39_25185"
     CDS             complement(8158..8742)
                     /locus_tag="VHX39_25185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438965.1"
                     /note="Members of this highly hydrophobic protein
                     family,regularly are found preceded by the yybP-ykoY
                     manganese riboswitch (see RF00080). A metal cation
                     transport function is proposed; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YjbE family putative metal transport protein"
                     /protein_id="HEX3994481.1"
                     /translation="MDWTQDLVALAQVVMIDVALAGDNAVVVGLAVAGLPVRQKRPAI
                     LLGIGGATVIRIAMGAVALQLLAIIGLLLAGGVLLLWVCWKMFRELRRSHRVVAGREG
                     TKTLRQAMMQIILADVSMSLDNVLAVAGAAHDRFWVLVTGLLVSVGLMGLAAGLIARL
                     LERHRWIAWVGLLIVLYVAVTMIWHGGHEVAGAM"
     gene            8817..>10135
                     /gene="purB"
                     /locus_tag="VHX39_25190"
     CDS             8817..>10135
                     /gene="purB"
                     /locus_tag="VHX39_25190"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEX3994482.1"
                     /translation="MIPRYSRPEMAAIWAPENRYRIWFEVEALAAEGMARIGAIPESA
                     ARTIREKGAPKLAAMNAADVERIDAIERETRHDVIAFLTWLAEAVGPDSRFVHQGMTS
                     SDVLDTTLSVQLTQAADILLADIDAVLAALKSRAMEHKYSLTIGRSHGIHAEPTTFGL
                     KLAGHYAEFARNRERLVAARAEVAVTAISGAVGTFAHLDPSVEEYVASKLGLSPEPVS
                     TQVIPRDRHAAFFCTLGIIASAVERLATEVRHLQRSEVREAEEFFHPGQKGSSAMPHK
                     RNPVLSENLCGLARIVRSAVTPALENVTLWHERDISHSSVERAIGPDATVTLDFALMR
                     LAGMMEKLLVYPQRMLANLESLGGVVHSGEVLLALTKAGILREDAYRIVQSCAMATWT
                     LLGTPEGRSFRVNLEADPDVARMVKPAELDAAMDPALHLRSVDRIFER"
BASE COUNT         1907 a         3092 c         3257 g         1879 t
ORIGIN      
        1 gatgctgctg gagttggacc gcgggatcga cctgctggcg ctgggttcgc tgaccagcga
       61 aggcggaccg accgaatggc gggccatggc gttctggtcg atcatctatg tgatctataa
      121 cctggtgacg aacggccccg atttcttcgg caagaccggc cctatccccg attatgtcgc
      181 gatcgcgcca ccgaaattca tagacgatct gcgacagatc caggccgact acaaaaccgc
      241 cacgctgaac gtcaagggcc tggacaggac tttcgtccgc tacttcctga tcccgtcaac
      301 caccgcgccg ctgcatccgc tggacgagcg gcagcagaga ggcctggcgg aagagttacg
      361 cgtccaggaa agccttgagg aacgctggga gaatctggtg cgcacggtgt ccgtggaggc
      421 cggcgaccag caatacgtgt tccggctgct gaagctggtg atccggcagg cggcgtacga
      481 ggccaaggtc ggcaaactgc cgcgcatggt ggcggccctg ccgcagcaat acgaacagag
      541 cctggatatt atcgcgagga aagtatgatg agcgataaac tggttgtcgt tggaagcagt
      601 ggttccagca caggggggac gagcacgcca gcaccgttgc catccccaac ttcattgatc
      661 gtgccggcgg cgctgtccgg tctgagggag ttgctgctgc atgacgaggt gcatcgcacg
      721 ctgatcggga tctcggcggt caggactctg ctgttggctg agctggtcga gcacgtcaag
      781 atcgcctgca aggaccatag gcaccttgtc gactatatca cgctagccac gccgggcagt
      841 ggtggtgcgc catcggtcgt cccgtcattg tccgggacgc cgcctggcgg gacaagcccc
      901 ggcgggacgg cgggcgcaac aggtgtcacc ggtcaaaacg ccgctggggc agcgccaccc
      961 gcccatggcg cccccacgga acccgcgcca agccagtttg tcacggaatt tggggataaa
     1021 atggcggctg ttgtgaggat gccgatcgaa caactgcgca cgacggtcga cagccacggt
     1081 gaggccatcg acaaaggggc ggccggaatc ctcgaactgc aggccgcgaa gaccgccagc
     1141 gatgccaggg ctcaggcgct ggaagcgagt ttcctccggc tcgataccgc acatcgcggc
     1201 ctgtccgccc gcgtcgccga gatgggcttc gaacaggacg aaatggagga agcaacggct
     1261 acgctgagag aagctgcgcg cgaggtcgaa ccgcttatca ttgcggtggt tgaagagggc
     1321 gggaataggg gttcgggcga gcacggccgg aaaacccaag cccgccccat gcgacaggcc
     1381 ggtgcgccct tccgcaaggc acaagcccgt aaaaagaagt aagcgccgtc ggcgtagcga
     1441 aatatcggca ccattcgtct taggagctgt tcgatgacta ttcagcaaac ggaaacgatc
     1501 cagcgactct gggaccgctt tatccgcgac cagctcgcca atgtcccgcc cgaggaccgc
     1561 caggcttatg cgcagcagtt tgaggagcgc cttgccgatc tatcggaaag gggcgccgag
     1621 gcagcgggcg gcggcgacgg gttcctcgat atgatcgggg ttggtccgaa aggaccggtg
     1681 gggtttgagg agatcgccta cccgtatctg aagccggact tcgactacag ctatgtttcg
     1741 agccaactgc acgcatcggc ggagctgtac ttcatctacc agtatgaacg ctcgaaagtg
     1801 ttccaggtgg tgaatgtgct gttgaggctg ttccattccg gcagcatcaa gctgacccgc
     1861 gggcccggcg ccaaggggtt gtacctgctg gagaaatggc agccgcaacg ctattcgctg
     1921 cggcatcggg aagcggccta tcgccgggcg ttcaactatg gtggcaacgc aagcacgcaa
     1981 agcggcgtgg tcaaccggaa tttccatcgc cagttggtcg ggttcatggg cgcggtcgcg
     2041 caatacctcc gcgatttgcg gatcggcgac gtcatccgcg gcggccagca aatcggcagc
     2101 cgggcattcg gcagcgtcgc gacggtgcag cggcttgggc tcgatctgcg ttatgcgctg
     2161 aatcgcgcca cctatggcag catctacgcg ctgtcgatgg agacggggca ttatctgaag
     2221 caggtgctga cgctgctgga cgcccccgat atcaagaaag cgttcgacgc gaataccagg
     2281 tggaacgtgg tcgaatccgt ttcgcaacgc tatttgggcg gcatggcgga tatttcgcag
     2341 cgtgccaaga tggccgaaag cgggcggcgc atcctgctgt tcgtcgcgga tcatgatttc
     2401 aagaccggga tcgatccgtc gctgttccag acggagatgg ggcaaatcgg ccagcatgcc
     2461 gaggcttggt tggcggcgta tcgcatgacc catgaagggc gcggcttcgt cgacgcgaca
     2521 ccgccggcgc acgacgtatt cgggacgaaa gtccggcgtg aacttcagcc tgcgttcgcg
     2581 gatctctagc ggggtgcgcc tcggagtgcc cttgagggag cgacgcgcat ggtccggagc
     2641 ctggagcccg acttatcggt gcatatcagc cgccggcgtt ggcgctgcgt cgtcgatccg
     2701 tatctctgcc tgtcgcttga cggcgcagcg ttcatacgcg gtttggctgg ccatgccgag
     2761 atttggcttg ggcccgagtt cctgaacatc ctggacagtt ggctgttata cgaccgtgag
     2821 ccgtcggcgt tgatgtggtc caaggacggc ggtcccgatg ccgacgaggt tcgccaggcg
     2881 ctgcgcatct ggcaagggct gcgtgattcc gccgggccgg gcagcgggcg gctgtgctgg
     2941 gtacgcgacg cggtgcggga aagctgtttg ccggcgggca tggatgaatc gctggtgccg
     3001 cattgggaag ccatggcgga agcactggat gagcgcttgt cccgagcggt cgaggccagc
     3061 gggccgatgg ttgcggcgac gcgcgacgcg gccgcgctat cggcgttgct gccggggtcg
     3121 gtgctactgt gccgcggcgg tcaagccgac ccaccgctgt gccatcattt gaaggcgtgg
     3181 cgtctgccct gccggcgcct ggaactgatc gacgatctgg tctcgatcga gcgcggtctg
     3241 ctgatgcaga tgctggtcga ggcggggctg gccggacatt tgtggagcgg cctgaatctg
     3301 gtcgtcgtgc acatcgtcgc ccccgggcac agcaggcttt cgctcgggca cgacttcgcc
     3361 ggtggcggcg aggacggtgg cttcctggca gagctggaac cgaggccggt gaagggggcc
     3421 tgggaagatg cgctcgcgtt ttggtacgat ctggctgggg agaactacgg tgataaatgg
     3481 gaacgttgaa ccgctgcgta tgaatacaga cgaactcgtg attcaggcgg taatggggca
     3541 gatcgctcat ccggtcgggc gcgcgaaccc ttatcggatt ggccaggacg gcgtgccgcg
     3601 cgtgttgccc ggcaccggcg gaatctcact gagttgtcgg attggcgatg cctgtgtcgg
     3661 tcttgccgtc gatcatgtcg agccaggtgt ggcactgcac aataatggtc gcgagattat
     3721 tggtgcggca aatggtccga atatggcatt actgaccagc gcctgcgtcg gcaatcccgc
     3781 tcgggtggcc accggcccgg cgaagggtgc tatcggcatg gtcaccggca agcacggtgg
     3841 cgtagaccat gtgctggttg atttcgataa aaagacactg tatcggctca atattggtga
     3901 caagattcaa atctatgctt gtggtctggg actgcaactg cctgacttcc ggcaaatcac
     3961 agtcaccaat tgtgcgcccg gcctgttgcg gcgttggaag ccacggggac gcaacggggt
     4021 gctcgaggtg cgcgtgactc acatggttcc ggccgcgatc atcgggtccg gtctcggaaa
     4081 aaacaatgtc tggcgcggcg attttgatat tcagctattc gatgaaccga cgcggcggcg
     4141 tcatcacctg gacacgttgc ggtttggtga tctggtcgcg gtgctggaca gcgacgcgcg
     4201 atttggcgcc gcctggcgcg gtggccgtgt aacgataggc gttgtcgtgc acagcgacag
     4261 tacgacggcc ggccatggac ccggcgtgac gccactgttg accggcccgg cgtcctgcct
     4321 acgaccggtt tgcgacagca gcgccaatat cgcttttctt tatcagcgcc gcgcagtcct
     4381 tccaccgcgc gcgcggcagc cgttttctgg tcgtattctg ccggccgcgc ccaagatccg
     4441 tcaacaggtt tcaacttttc gtgataagat ggcctttact tgattggcga ggacgtttta
     4501 ccttactaat tatagagaga gctaaacgtc aagaaaatgt tttcgattga tacaacctgt
     4561 ttcagtggac atttttcttc tactctttgt cgtcgtctta aatcggtgga gttgcatgaa
     4621 aatggccgag cagtccactg ccggcggctt ggtgtctgtc cgaaatggcc atgacagatc
     4681 ccatattcgc caagtcggcc ggatcgaact gggcgaccgc cagttcatcg ttacgttggc
     4741 gtcggatctg cattccgatg cggaacatac gcaaatctgc cggtttgaac tgggtggatt
     4801 tggattgatg gtgatcgagg atgggcacaa ggacgacacc atggacgacg tggtggcccg
     4861 cctgacgagc cgggagcttg agattgccat tctggtcgcg caggggcatg caaacaagaa
     4921 tatcgcctac cgcctgcgga tcagcgagtg gacggtggcg acgtatctgc gccggatctt
     4981 cgccaaactg aatgtcgaaa gccgagcagc gatggtgttt cgttgtgctc cgctgattac
     5041 cgcgtcgctt gaaccggtcc gcggacgtag cgcggactac atgcgatagt cgggtttgga
     5101 ctgagccatt acagtagacg atgctcttcg actacgaaca gcgatgcgcc ggctgtgttc
     5161 cgggtcgcca gggccgcccg gacatctatc atgctgtcga accatgcctg cgccatcagg
     5221 cccaccgcga ccttcaaatg tggcacggtg ctatttggag ccggtccttg ttcgagcaca
     5281 tgatagcgcg tcaagcctcg aaggcccggt tgcgattgca gttccaacag atgcgccgtc
     5341 gctgcggtgc tttcgggata tacggcgatc aagcccgtct gaccggcgga cgccgagcgg
     5401 ggaaccattt cgaccggctg ggccatgacg cgtgaaacgg cgccgataaa ctgccgggaa
     5461 tcgacgttgc acgctgccat ttcgggcgac gcgtgcgcgt gctgccgatc cgcttcgttg
     5521 gcgaagaaca gcaggggaaa cccatcaatg cgcgttgcat tcggcggggt cgggtccacc
     5581 acatggcatt gggtgtaacg gcgcaggccg gcgaacttgc agacaagcgg gccatgcacc
     5641 cctagccagt ggcggcggaa ggtagctgca tcgacactat cctgccgacg gatcaggctg
     5701 atggccgcta tcatcgtttg ccaaagtaaa gggcgggatc ggatgcccgc acacgcgctt
     5761 ccggtagccc cagttcgcgg cgaacaatgt tggttccctc caccagcgaa acgcatttgt
     5821 agtaagcgat gcgccggctg agtccttcgc gtccgaagcc gcaatccgtg gtgatcacca
     5881 gccgctccgg cggaatgaat tccagtgccc gtctgatgag gctggcgacg tattcgggtg
     5941 gctccacaac ggtgttgcag tggttgacga caccgatgcc aatcttcttg tcggtcttgt
     6001 atttgccaaa cagatgcaga tccttaccat cactgctggc gcattcgaat gtgattacgt
     6061 cagcattcaa ctgcaacaaa tgcggcatcg cccgttcata gctcggcacc tcccagtaga
     6121 cgcgctgctg gttcggattg ccccagcagg tatgcaccca gatctcggcg tcaaccccca
     6181 cgagctgccg gttgaacgct tcggtgagga attccaggtc ggcgtcggtg caatcgggac
     6241 gcagcgaacg cccgtgatgc ggtggctcct caacctggat cagcggacag cctgcgtcgg
     6301 ccagttcgcg cagttcggcg ttcatgatat cgcacaggtc caggatcatg gccttgtcgt
     6361 cggtgtagaa ctcgttccac agcatgctgg cgagcgcggg cgcgcagatc gccccgaact
     6421 tcaccggacg gtctgtcagg cgctgggcga cttgccagag tgccgagtat tcccaaggac
     6481 cccgcgtcag tttccccgag acgatgctgg gttgataggc ttcctgcact tcccacagga
     6541 tttttccggg gcgcagatcg tgccgtccca tccagccgcg cgacgtgtcg cggtgaccgt
     6601 tgatgccgcc aaggcgttcg atcggataga agaaccacga tttgccgccg acggccaggt
     6661 cgaagcggct gtcgccatcg gtgacgatgt ccaggccagc ggcttcctgc gcgttgatga
     6721 tggcggcaac ggcatccatg tactgctcac gaaacaaaga ttcgcccagt gccgccttga
     6781 acgatcgacc acccaggctc atgtcgaacc acagcgggcg tgggtaggac ccggtgatcg
     6841 cggtgggcag caccagattg ctggtcgttt tcagcattga cgtcgctccc tgtgtcgaac
     6901 acgccgtttt ctccgcggca tggttcgcac cgcgtaccgc gactgtcaac tcgccggggc
     6961 ggcttgcgaa tctttaggct gcggcacatg atcttcagtg aatgataagg acgtcttcga
     7021 catgaccagt cagaataaga tccgcgtcgg cattgtcggt gcaagtgccg gacgtggctt
     7081 cgcctcaatc gctcacgttc cggctctgaa agcactgccg gacttcgaga tcgtcgcggt
     7141 cggtaccacc cgccaggaat ccgccgatgc agcagccaga cattacggcg ctcggctggc
     7201 tttcgccgat gccggggaac tcgccaggca tccggacgtc gatttggtga ccgtctgcgt
     7261 gaaggcgcca gatcattacg gtccggttat ggcggcgatc gaggccggca agcacgtcta
     7321 ctgcgagtgg ccgctgggcc ggaacaccga ggaggcgatc cgcatgcacg cggcggcgga
     7381 gcgagccggc gtgcggcacg cgatcgggct gcaaggccgg gtgtcgccgt ccatcagcta
     7441 cgtgaaggat ttgatcgccg atggttatat cgggcgcgtc ctgtccggaa cgatgttcgt
     7501 caacgcggcg aactggggcg ccacgctcag cgaagcctat caggcggacc ggaccaatgg
     7561 cgccaacctc atgacgatca ccggcgggca caatctggat gccctgtgct attgcctcgg
     7621 ggagtttcac caacttgcgg cgttcgtggt cagccaacgc gaccagatta aactgcaagc
     7681 cacgggcgag atgaccccga agacgtcgcc ggatcagctt ttggtcagcg gcatcgtcgg
     7741 cgacggcgcg gccgtatcgt tccaggtacg cggcggcatg tcccgcgggc tggaattcct
     7801 gttcgaaatc catggcgaga tgggcgacct ggtgctggaa gcgaccacgc gcgcatcgac
     7861 acagcggcag gaattgtcag tgcgcggggc acgcggcgcg ggcacaccgc tggccgaact
     7921 ggacattcct ggaaagtatc gttgggtgcc ggacgcgacg cctcgcgaat cgccttacaa
     7981 tgtcgcgcag ctttatgccg cgctgggagc ggccattcgc gatgacaagc cagccgtccc
     8041 ggggtttgac gctgcggtga ccaggcacca catgctggac atgatcacgc gggcgtccga
     8101 gaccggacaa acccagaccg cctgacgggc acttcgcagg tggtgaccaa acacccccta
     8161 catcgcccct gcgacctcgt gcccgccatg ccagatcatg gtcaccgcca catacagcac
     8221 gatcagcagc ccgacccagg cgatccatct atgccgctcc aacaagcggg cgatcaagcc
     8281 agccgccagc cccataaggc cgaccgacac cagcagtcct gtgaccagca cccagaaccg
     8341 gtcgtgcgcc gcaccggcga cggccagcac attgtcaagg ctcatggaca catccgccag
     8401 gatgatctgc atcatcgcct ggcgcagagt tttggtgccc tcgcggccgg caacgacgcg
     8461 atgcgagcgt cgcagctcgc ggaacatctt ccagcagacc cacagcagca ggaccccgcc
     8521 ggccagcagc agcccgatga tcgccagcaa ctgcaacgcc accgcgccca tggcgatccg
     8581 gatcaccgtc gccccgccaa tccccagcag gatcgccggc cgcttctgcc gaaccggcag
     8641 cccggccacc gccagcccca ccaccaccgc gttatcgccc gccaacgcca cgtcgatcat
     8701 caccacctgg gccaacgcaa ccaggtcctg agtccaatcc atgcttgcct tccgggatgc
     8761 ctgggtctag ctggcccttt ccctcgcttc gaacaagcac atcggacaag acagcgatga
     8821 tcccgcgcta ttcccgcccc gaaatggccg ccatctgggc gcccgagaac cgctatcgca
     8881 tctggttcga agtcgaagct ctcgctgccg agggcatggc gcggatcggc gccatccccg
     8941 aatcggccgc ccgtaccatc cgtgaaaaag gcgccccgaa gctggccgcc atgaatgccg
     9001 ccgatgtcga acggatcgac gcgatcgagc gcgagactcg ccacgatgtg atcgctttcc
     9061 tgacctggct ggccgaggcg gtcggtcccg attcccgctt cgtgcatcag ggcatgacca
     9121 gttccgacgt gctggacacc acgctatcgg tgcaactgac ccaggcggcg gacatcctgc
     9181 tggccgacat cgacgccgtg ctggccgcgc tgaagtcccg cgcgatggag cacaagtaca
     9241 gcctgaccat cggccgcagc cacggcatcc acgccgaacc gacgacgttc ggactgaaac
     9301 ttgccggcca ctacgccgag ttcgcccgca atcgggaacg tctggtcgcc gctcgggccg
     9361 aggttgccgt caccgcgatc agcggcgcgg tcggcacgtt cgcccacctt gaccccagcg
     9421 tcgaggaata cgtcgcctcc aagctgggcc tgagccccga acccgtctcc acccaggtca
     9481 tcccgcgcga ccgccacgcc gcgttcttct gcaccctggg catcatcgcc agcgcggtgg
     9541 aacgcctggc caccgaagtc cgccacctgc aacgcagtga ggtccgcgaa gccgaggaat
     9601 tcttccatcc cggccaaaaa gggtcctcgg cgatgccgca caagcggaac ccggtgctga
     9661 gtgagaatct ttgcggcctg gcccgtatcg ttcgctccgc cgtgacgccg gcattggaga
     9721 acgtgacgct gtggcacgaa cgcgacatca gccattcgtc ggtggagcgg gcgatcggac
     9781 cggatgccac ggtcaccctg gatttcgccc tgatgcggct ggccgggatg atggagaagc
     9841 tgctggtcta cccccagcgt atgttggcca atctggaaag cctgggcggc gtggtccatt
     9901 cgggcgaggt gctgctggcg ctgaccaagg ccggcattct gcgcgaagac gcgtatcgaa
     9961 ttgtgcaaag ctgtgcgatg gcgacatgga ccctgctggg cacaccggaa ggccggtcgt
    10021 tccgggtcaa ccttgaagcc gacccggatg tcgcacgcat ggtcaaaccg gcggaactgg
    10081 atgcggcgat ggacccggcc ctgcacctgc ggtccgtcga ccggattttc gaacg
//
LOCUS       DATAVD010001319         1947 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2919277, whole genome shotgun sequence.
ACCESSION   DATAVD010001319 DATAVD010000000
VERSION     DATAVD010001319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2919277"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(60..821)
                     /locus_tag="VHX39_25195"
     CDS             complement(60..821)
                     /locus_tag="VHX39_25195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX3994483.1"
                     /translation="MGSTVTAIPTRMSAEEWQTRCDLAACFRLVEMFGWSDLINTRIT
                     ARVPGRHDHFLINPYGLLYDEVTASSLVKIDADGNKVEPSDVEVNSGGFAIPSALHMA
                     RPEVNCVLHSHTVAGCAVSMQKDGLLPLNQHALQVIGDVAYHDYAGTARHPDERARLL
                     ADFGDRHIMVLRNHGLLIVGASVAETFVATYRMERACTMQLAFQQSGAVFNPIAEDVV
                     AAAWQKSKASGDRIAKFEWAALLRRLDRTDPSYKQ"
     gene            complement(826..1584)
                     /locus_tag="VHX39_25200"
     CDS             complement(826..1584)
                     /locus_tag="VHX39_25200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3994484.1"
                     /translation="MIDLYFWPTGNGKKIVILLEELGIPFTFKPINIGRGDQLTPQFL
                     KISPNGRMPAIVDDEPMGGGEPISIFESGAIMTYLAEKSGKFLPTDTRGKYDVLQWVN
                     WQMGNQGPKLGEQGHFRRAKAAGNNGDLTYALRRFDNEAHRIFGVLNLGLFNKQYLAA
                     GQYTIADMICYPWASSWETRDINIDEFPNVKRWLEEMGARPAVKKAMALGPEFREDPA
                     SISPQEAERRRKIVGDQRAQAVPKEWVAEAQAAQ"
BASE COUNT          359 a          578 c          613 g          397 t
ORIGIN      
        1 cggcaccgca ccggttgcgc cgcggcggac ggtgccggtt acgccggtca agagctgaac
       61 tactgcttgt acgagggatc ggtccggtcc aacctacgca gcaacgccgc ccattcgaac
      121 ttcgcaatcc gatcgccgga ggctttcgac ttctgccagg ccgcagcgac aacatcctcg
      181 gcaatcgggt taaacacggc gcccgattgc tggaaggcga gttgcatcgt gcaggcccgc
      241 tccatgcgat acgtcgccac gaacgtttcg gcgacgctgg ctccgacgat cagcaggccg
      301 tgattgcgca gcaccatgat gtggcggtcg ccgaaatccg ccagcagccg agcccgttcg
      361 tccggatgcc gcgcggtgcc ggcatagtcg tggtaagcca catcgccaat cacctgcaac
      421 gcgtgctggt tgagcggcag aagtccgtcc ttctgcatcg acacggcgca gccggcgacg
      481 gtgtggctgt gcaggacaca gttcacctcc ggccgcgcca tgtgcaatgc gctcgggatg
      541 gcgaaacctc cgctgttgac ctcaacgtcg gagggttcga ccttgttgcc gtccgcgtcg
      601 atttttacca acgacgatgc ggtgacctcg tcatatagca gaccgtacgg attgatcagg
      661 aaatgatcgt gccgccccgg cacccgcgca gtgatgcggg tgttgatcag gtccgaccaa
      721 ccgaacatct cgacaaggcg aaaacaggcg gcgaggtcgc agcgggtttg ccattcctcg
      781 gcggacatcc gcgtcggaat ggccgtgacc gtcgatccca tcccgctact gcgccgcctg
      841 ggcttcggcg acccactctt tgggcaccgc ttgggcgcgc tggtcaccga cgatcttgcg
      901 acggcgttcg gcttcctggg ggctgatcga ggccgggtcc tcacggaatt ccgggcccaa
      961 cgccatggct ttcttcaccg ctgggcgggc acccatttct tccagccagc gtttgacgtt
     1021 ggggaattcg tcaatgttga tgtcgcgggt ttcccaactg gaagcccagg gatagcagat
     1081 catgtcggca atggtgtact ggccggcggc gagatattgc ttgttgaaca agccgagatt
     1141 taagacgccg aagatccggt gcgcttcgtt atcgaaccgg cgcaacgcgt aggtcaggtc
     1201 gccattgttg ccggcagcct tggcgcgacg gaaatggcct tgctcgccca gtttgggacc
     1261 ttggttgccc atttgccagt tgacccattg cagaacgtcg tattttccgc gtgtgtcggt
     1321 ggggaggaat tttcccgatt tctcggcgag gtaggtcatg atggcgccgg actcgaaaat
     1381 cgagatcggt tcgccgccgc ccatgggctc atcatcgacg atggcgggca tgcggccgtt
     1441 gggggaaatc ttcagaaact gcggggtgag ctggtcgccg cggccgatgt tgatcggctt
     1501 gaaggtgaac gggatgccga gctcttccag cagtatgacg attttcttac cgttgccggt
     1561 gggccagaag tagaggtcga tcattttggg atcctcctgt ttgacgtggt gggcacgacg
     1621 cccagacttc gtcgtggctt tgatgtgcgc tggcgggcca ggccgctttc aggcgacatc
     1681 ttgccccgaa cgctcaccgt gttccagacc cggccagaca tcagccagca acgcactcgc
     1741 gaagggccgg tcatcaccgc ttcgtggttg agtctgaagc caaattacca gggcggctaa
     1801 attaaacgtc gatgtgacga cggcgctatt tgaccggcag gtcggcaatc aggtcaaccg
     1861 gccacggcat acctgttgct cgcgacgtta aggcttcgtc aacaaatata cgagatgatg
     1921 ggtggagaaa tggagacact gccgcca
//
LOCUS       DATAVD010001320         2554 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1616580, whole genome shotgun sequence.
ACCESSION   DATAVD010001320 DATAVD010000000
VERSION     DATAVD010001320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2554
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1616580"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..330)
                     /gene="tmk"
                     /locus_tag="VHX39_25205"
     CDS             complement(<1..330)
                     /gene="tmk"
                     /locus_tag="VHX39_25205"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEX3994485.1"
                     /translation="MSGAPPVGRLITLEGGEGAGKSTQARMLADALSELGLPVLSTRE
                     PGGAPGAEFLREVLLSGRIDWSPAAETMLHVAARMEHVAKTIRPAIEAGTWVVCDRFH
                     DSTMAYQG"
     gene            complement(327..1529)
                     /locus_tag="VHX39_25210"
     CDS             complement(327..1529)
                     /locus_tag="VHX39_25210"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HEX3994486.1"
                     /translation="MKLSRRLALASTVAALAGGAPATLAARTPKGKSKEPVPEGSPGD
                     TPLGPVDTVAKWAFIQDFTTGAVLLDKSADEPMPPSSMTKLMTIYLTYEQLAKGQIKL
                     TDTVIVSARAAAMGGSRMFLEVGKPVGIEDLIRGVIVDSGNDAATVLAEAIGGNQEHF
                     VDMMNAKAKELGMTHATFRNPTGWPDPEQAMSCRDIAIVASHIITDFPQYYHYDSERT
                     FKYNNIEQENRQPMVQAGTADGLKTGHTDAGGFGLVSSSLRDGRRVVMVLNGMTSMHE
                     RAGESEKLMNWAFANFENVHLFSANEVIDNAQVWLGTEKTVSLVGAKDTIVTLPKSWR
                     QTASIRISYDAPIKAPIAKGQPLGVMTLRGHGVPTMDINLVAGADVDRLNLPMRGLAV
                     VTHFVSGG"
     gene            complement(1545..2504)
                     /locus_tag="VHX39_25215"
     CDS             complement(1545..2504)
                     /locus_tag="VHX39_25215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEX3994487.1"
                     /translation="MLTRRSALATAIPAVLAAPAYAANSFQNFVAGIYAEAASEGIRR
                     DVLDAAFTGVAPNQAVIDKDRKQVEFSMTWPQYRALVVSNQRIVDGRAAVAANRAWLT
                     RADSYFRVEASVIAGIWGVESNFGVLTGKYRVVEALATLGWEGRRAAFFRSELLNALR
                     ILNNGDIGPAGMTGSYAGAMGQPQFMPSSYLRLAVDFDGDGRRDIWNSKADVLGSIAN
                     FLARSGWRQGETWGQQVRMPPGLAAMGREERRPVATWARMGVVPTAGEWAASADAPAA
                     AIGPDGPDGETFLVFNNFSVIRRYNPSDYYAIAVGLVGDWVLA"
BASE COUNT          476 a          869 c          745 g          464 t
ORIGIN      
        1 gccctgatac gccattgtcg agtcatgaaa ccggtcacac accacccagg tcccagcctc
       61 gatcgccgga cggatcgtct tggcaacgtg ttccatccgc gcggcaacgt gcagcatggt
      121 ttccgccgcc ggactccaat cgatacgacc ggataacagc acctcacgca ggaactcggc
      181 ccctggcgca ccgcccggct cacgcgtgga caacaccggc agtcccagtt cgctcagcgc
      241 atccgccagc atccgcgcct gcgtcgattt gcccgcgccc tccccgcctt ccagcgtgat
      301 caggcgtcca actggcggcg ctccactcac ccgccggaca cgaaatgcgt caccaccgcg
      361 aggccccgca tcggcaggtt caaccgatcc acatcggcac cggccaccag gttgatatcc
      421 atggtcggca caccgtggcc gcgcaacgtc atcacgccca ggggctgacc cttggcaatc
      481 ggcgccttga tcggcgcatc gtagctgatc cggatcgacg cggtttgccg ccaggacttc
      541 ggcaaagtta cgatcgtatc cttcgcaccc accagagaca ccgtcttctc tgtccccagc
      601 cacacctggg cgttgtcgat cacctcgttg gccgagaaca agtggacatt ttcgaaattg
      661 gcaaaagccc agttcatcag cttttccgac tcgcccgcgc gttcgtgcat ggacgtcatg
      721 ccgttcaaca ccatgacaac gcgcctgcca tcgcgcaatg aactggaaac cagaccaaac
      781 ccaccggcgt cggtgtgacc ggtcttcaat ccatcggcgg tgccggcctg caccatcggc
      841 tgacggttct cctgctcgat gttgttgtac ttgaacgtcc gctcggagtc gtaatggtag
      901 tactggggaa aatccgtgat gatatgggac gcgacgatgg cgatgtcgcg gcagctcatg
      961 gcttgctcgg ggtcgggcca accggtcggg ttgcggaacg tggcatgcgt catgccaagc
     1021 tctttggctt tcgcattcat catatcgacg aaatgttcct ggttgccgcc gatcgcctcg
     1081 gcgagcaccg tcgcggcgtc gttgcccgag tccacgatca cgcctcggat caggtcctcg
     1141 atgccaaccg gcttgcccac ttcgaggaac atccgcgaac cgcccatggc agccgcccgc
     1201 gccgaaacga tgacggtgtc ggtcagcttg atctggccct tcgccaactg ttcataggta
     1261 aggtagatcg tcatcaactt ggtcatcgag gacggcggca tcggctcatc cgcactcttg
     1321 tccagcagca ccgcgcccgt ggtgaaatcc tgaatgaatg cccattttgc caccgtatca
     1381 accgggccca gtggggtatc gccaggcgag ccctccggca caggttcctt cgatttgcct
     1441 ttgggcgtgc gggcagcaag cgtcgccggt gcgccccccg ccagggcggc aaccgtggat
     1501 gccagggcga ggcggcgcga gagtttcatg tcacagtctc ctgctcaggc caggacccag
     1561 tcgccgacca aaccgaccgc aatggcatag tagtcggacg gattgtagcg cctgatgacc
     1621 gagaagttgt tgaaaaccag gaatgtttcg ccgtctggac cgtcgggtcc gatggccgcc
     1681 gccggagcgt cggcagaggc ggcccactcg ccagcggtcg ggacgacgcc catccgcgcc
     1741 caggtagcaa ccggccggcg ctcttcgcgt cccatggcgg ccagtccggg cggcatgcgg
     1801 acctgttggc cccaggtctc gccctgccgc catccggaac gcgccaggaa attggcgatc
     1861 gagcccagta cgtcagcttt gctgttccag atatcgcgcc gcccatcgcc atcgaaatcg
     1921 accgcgaggc gcagataact gcttggcatg aactgcggct ggcccattgc cccggcgtag
     1981 gatccggtca tgcccgccgg cccgatgtcg ccgttattca ggatgcgcag agcgttcagc
     2041 aactcgctgc ggaaaaacgc cgcgcggcgc ccctcccagc cgagtgtcgc gagtgcttcg
     2101 acgactctgt atttgccggt cagcacgccg aagttcgact cgacacccca aatgcccgcg
     2161 atcaccgaag cctcaacccg aaaatagctg tcggcgcgcg tgagccaggc ccgattcgcg
     2221 gccaccgcgg cgcgcccgtc gacaatccgt tgattgctga cgaccaaagc gcggtattgc
     2281 ggccaggtca tactgaattc gacctgtttg cggtctttgt cgatcacggc ctgattgggg
     2341 gcgacaccgg tgaaggcagc gtccagcacg tcacgccgga tgccctctga cgccgcctcg
     2401 gcatagatcc cggcaacgaa attctgaaaa ctgttcgccg catacgctgg cgcggcgaga
     2461 acagccggaa ttgcagttgc gagggcggag cggcgcgtca acatgcgctg cttcctgcca
     2521 cgtcaaatcg agtccaggca atcatcatga cagc
//
LOCUS       DATAVD010001321         3563 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_131191, whole genome shotgun sequence.
ACCESSION   DATAVD010001321 DATAVD010000000
VERSION     DATAVD010001321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3563
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131191"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     regulatory      complement(<1..113)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            751..1302
                     /locus_tag="VHX39_25220"
     CDS             751..1302
                     /locus_tag="VHX39_25220"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEX3994488.1"
                     /translation="MLHLLVIYALASGLAAQLVDQIPADIKADIVKEKPPEQPKTPPP
                     PPPDLVKPPPPFIPPPDIVIANEAPTNAITNVTNVVAPPPKASAVPATLAAGRNNNCA
                     SKYYPAIAIRLNHEGNTVVTVHIGADGAVTSADVSQSSGFNDLDQAAVQCVTAQWRFS
                     PATSNGTPIESTKQYRIVWKLTG"
     gene            1357..1743
                     /locus_tag="VHX39_25225"
     CDS             1357..1743
                     /locus_tag="VHX39_25225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994489.1"
                     /translation="MISKKLAIAAAIALLTGLGAGQAFAQSSDQPPAPAMASPSGAPA
                     TGDQSTAPAPAAAAPAPAPAVAAPPPAAPTEEANPYGLGSLWNKGDFVARGVIVLLAI
                     MSVGTWYISLMKYWEQSRVLGQAAAV"
     gene            1804..2229
                     /locus_tag="VHX39_25230"
     CDS             1804..2229
                     /locus_tag="VHX39_25230"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEX3994490.1"
                     /translation="MFRTVAESGVRAASGQGTGIVNLNDWIAMSLNRQLEEINARLQG
                     GIAFLASVGSTAPFIGLFGTVWGIYHALVAIGIAGQASIDKVAGPVGEALIMTAIGLF
                     VAVPAVLLYNFLVRRNKVINEKLRSFASDLQTYLVTKGK"
     gene            2256..2693
                     /locus_tag="VHX39_25235"
     CDS             2256..2693
                     /locus_tag="VHX39_25235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005247138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEX3994491.1"
                     /translation="MAMDVSSSDHSEDAALNTTINTTPLVDVMLVLLIIFLITVPVVL
                     KQVPVVLPNARNIATQTKPENIVFSVNKDGDVYWGNELMTDNGAIIARLEQRAVIKPQ
                     PEVHIRGDKDARFQDIGRLVYDCQRAGIQKVGFLTEPQNIVPQ"
     gene            2732..3160
                     /locus_tag="VHX39_25240"
     CDS             2732..3160
                     /locus_tag="VHX39_25240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003617173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEX3994492.1"
                     /translation="MAMNIGEGGGEGEVMVEMNTTPLIDVLLVLLVMLIITIPIQTHA
                     VKLDMPPPNIHPPLTPPTVVNINIDFDGTVEWNSTPVDMKTLDGYLYQEGQKDPVDQD
                     EIHITADRLAKYDTVAKVMANAQRRGVAKMGIVNTNAYIQ"
     gene            3221..>3563
                     /locus_tag="VHX39_25245"
     CDS             3221..>3563
                     /locus_tag="VHX39_25245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994493.1"
                     /translation="MNEEAMISFNFRAVAAALFLSAATVALSSAVMVVPADAAARPAV
                     GKLLQQAIDDAKNGSTGAANAKVQQAEAVGGLTPGDQQAIEQVKSFISAKSGNGATGS
                     KAKFAQDYNAGR"
BASE COUNT          752 a         1067 c         1032 g          712 t
ORIGIN      
        1 ccgcctcagt ggtattcgga cgaccgctcg ccggtcacag ttgcggggac agccgcggtc
       61 ttaaaccgcg ttcccttgaa tccctttcgg gaacctcgcg ctaaattgaa cgctaatagc
      121 ggaagcgttt ttcgtcaaac agatcattgt gcagtgcaca cacaatactg tgctcgctta
      181 tcaatcgcta tgccggaagg actttttgtg aacctatttc tgacacgttg ccatttcatc
      241 ctgcgccatg ttgtggatga gctggcgtat ggaacatttc gccgcatatc gaaacgcgta
      301 gaatttgcgc aacaagctgc gcgttcggct tttttgcaac gccatttgtt cgacagcgta
      361 ataagagtgt tcgcaaagag ccgtccaaca ggaggagatt tcgcttcaat gattggcaaa
      421 atcagggact tgcggtgccg cggcgcttgc ttcagcttgc agcagaaatt ttcggttgcc
      481 gataccgtgt ttaccaattg aagagctgga ccgcgccggg aagcacgatt acgatgtatc
      541 aaaagaacac caaagaattt gtgccgttac ctgcggttca ttggagggga tgtgccagcc
      601 tggttttcaa caatcaggcc ctgcgcttat gcgccgggtc tcatcacgtt tggttagtgt
      661 agatccatgc aacagccaca acacgatctg agggcgttcc aagtctcggc ggcaagtccg
      721 cgccgtatcg tcagcattgg cgccgtcgcc gtgcttcatc ttcttgtgat ttacgcgctc
      781 gcgtccggtc tggccgcgca actcgtcgat cagatcccgg ccgacatcaa agccgatatc
      841 gtcaaggaga agccgccgga gcaaccgaag acgccgccgc cgccgccgcc ggatctggtg
      901 aagccgccgc cgccgttcat cccgccgccg gatatcgtca tcgcaaacga ggcgccgacg
      961 aatgcgatca ccaacgtgac aaatgttgtg gcgccgccgc ccaaggcttc agccgtcccg
     1021 gcaacgctgg ccgctggccg caacaataac tgcgcttcca aatactatcc ggcgatcgcc
     1081 attcgcctga accacgaagg caatacggtc gtaaccgtgc atatcggggc cgacggggcc
     1141 gtgacgagtg cggatgtttc gcagtcgagc ggtttcaacg atctggatca ggcggctgtg
     1201 caatgcgtca cggcgcaatg gcgcttctcg cctgccacat cgaacggcac gccgatcgag
     1261 tcgacgaaac agtatcgcat cgtttggaaa ttgactggct gacccttggt gggaaggcgt
     1321 gttttttctg agtttttatc tacggagttg aacaacatga tatcgaagaa attggcgatc
     1381 gctgctgcta tcgctctgct gacgggcctt ggcgccggtc aggcatttgc acagtccagc
     1441 gaccagccgc cggcacccgc gatggcgtcg ccgtccggcg caccggcaac aggcgatcaa
     1501 tccacggccc cggccccggc tgctgccgca ccggcgcctg cgccggccgt agccgcgccg
     1561 ccgccggcag ctccgaccga ggaggccaac ccgtacggtc tgggctcgct gtggaacaag
     1621 ggcgatttcg tcgcccgtgg cgttatcgtg cttctggcga tcatgtcggt cggcacctgg
     1681 tacatctcgc tgatgaaata ctgggaacag tcgcgcgtgc tgggccaggc ggctgcggtt
     1741 tagaaacgtt tctggtcgtc gaacaacctc aacgagggca tcgacaagct ggccaagaac
     1801 agcgtgtttc gaaccgtcgc cgaaagcggg gttcgtgccg catccggtca gggcacggga
     1861 atcgtgaacc tcaacgactg gatcgccatg tcgctgaacc gccagctgga agagatcaat
     1921 gctcgcctgc agggcggcat cgccttcctg gcgtcggtcg gctcgacggc gccgttcatc
     1981 ggtctgttcg gtacggtgtg gggcatctat cacgccctcg tcgccatcgg catcgccgga
     2041 caggcctcga tcgacaaggt cgccggccct gtgggtgaag ccctgatcat gaccgccatc
     2101 ggtctgttcg tggccgttcc ggccgtgctg ctctataact tcctcgtccg ccgcaacaag
     2161 gtgatcaacg agaagctgcg cagcttcgca tcggatctgc agacctatct cgtcaccaag
     2221 ggcaaataag tccgtcaggt attggagtag cccttatggc gatggacgtt tcttcgtcgg
     2281 atcacagtga agacgcagca ctaaacacca cgatcaacac gactccgttg gtggacgtga
     2341 tgctggtgct gctcatcatt ttcttgatca cggttccagt cgtgttgaag caggtgccgg
     2401 tggtcctgcc caacgcgcgc aacatcgcaa cccagacaaa acccgagaac atcgttttct
     2461 ctgtcaacaa ggatggcgat gtctactggg gcaacgaact catgacggac aacggcgcga
     2521 tcatcgcgcg tcttgagcag agggccgtga tcaagccgca accggaagtg catatccgcg
     2581 gcgacaagga tgcgcgcttc caggatatcg gccgtctggt ttacgattgt cagcgcgccg
     2641 gcatccagaa agtcggcttt ctgacagaac cgcaaaacat cgtgccgcag taaagcgttt
     2701 gattgacaga acaggataaa ggtatcgcgc aatggcaatg aatatcggcg agggtggcgg
     2761 cgaaggcgaa gtgatggtgg agatgaacac cacgccgctg atcgacgtgc tgctcgttct
     2821 cctcgtcatg ctcatcatca cgattccgat ccagacccat gcggtgaagc tcgacatgcc
     2881 gccgcccaat attcatccgc cactgacgcc gccgacggtc gtcaacatca acatcgactt
     2941 cgacggaacc gtggaatgga acagcacgcc ggtcgatatg aaaacactgg atggctatct
     3001 gtatcaggaa ggccagaagg atccggtcga tcaggacgaa atccacatca ccgccgaccg
     3061 tctcgccaaa tacgatactg tcgcaaaagt gatggccaac gcccaacgcc gcggcgtggc
     3121 caaaatgggt attgtgaata ccaacgccta tatacagtag ttgtgagggg tgcccgtgga
     3181 cttggccgga tgcctcatgc atcggccgcg aacgcgacct atgaatgagg aagccatgat
     3241 ttcgtttaat ttccgggccg ttgcggccgc cctgttcctg agcgcggcga ccgttgcgct
     3301 ttccagcgcc gtcatggtgg tccccgccga cgccgccgcc cgccctgcgg ttggcaagct
     3361 gctccagcaa gccatcgacg atgccaagaa cggcagcacc ggcgcggcaa atgccaaggt
     3421 ccagcaggcg gaggccgtcg gaggccttac ccccggcgac cagcaggcca tcgaacaggt
     3481 gaagtcgttc atcagcgcca aatcgggcaa tggcgccacc ggctccaagg ccaaattcgc
     3541 acaggactac aacgccggcc gct
//
LOCUS       DATAVD010001322         3871 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2358637, whole genome shotgun sequence.
ACCESSION   DATAVD010001322 DATAVD010000000
VERSION     DATAVD010001322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3871
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2358637"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..679
                     /locus_tag="VHX39_25250"
     CDS             <1..679
                     /locus_tag="VHX39_25250"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3994494.1"
                     /translation="RALSLAINREDLKDLVMDGYAVPTGQLMLEGQSGYDPAIPVDPY
                     DPDHARRLLAETGYKAGFGLSLHAPDNGYVNPAKLAVAIARMWTSIGVNCQVEILPAA
                     AFFTGALRGEFSMRLSGWLSDTGEASSDLIELVASSDPGKGRGAVFTPDKYSNPKVDT
                     IIEQALATIDRDKRESLYREAERLAMPDMPIIPLHHQVNLWAVRAGLSFHARMQERTN
                     AWDIEPQ"
     gene            809..1522
                     /locus_tag="VHX39_25255"
     CDS             809..1522
                     /locus_tag="VHX39_25255"
                     /inference="COORDINATES: protein motif:HMM:NF014816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3994495.1"
                     /translation="MIKLYGMGSPNVVKVYIALEELGLPYEVAPVDVFTGKQFDAEFL
                     KLNPNAKVPVIVDSEGPGGKPYTCFESGAILLYLAEKTGKFLSHDMATKYDEIQWLMT
                     QMSTVGPMFGQHVHFIRFAPKGNDYAQSRYTTQATRVSEVIEGRLAHHAYLGGAHYSV
                     ADMATFPWLRNIPALMGDTAAAKFPHIMAWVGKISERPAVKAALAKVDAVRAATTAFD
                     KAAAEDLDKVFGRGRFAAD"
     gene            complement(1569..2006)
                     /locus_tag="VHX39_25260"
     CDS             complement(1569..2006)
                     /locus_tag="VHX39_25260"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016846 - carbon-sulfur lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX3994496.1"
                     /translation="MCGAVRLEIDVPARWAWHDHSRASRHAQGCAYATYVGSWRSRFR
                     ILRGAESISRFEDLQEGTTRSFCTRCGTPLSYESKGSPQMVNIPRALFTERTGREPRY
                     HMSLHEQPEWTYLGEPLAPLKGFPGVMWQPPGRKKHRRAEGMF"
     gene            2198..2716
                     /locus_tag="VHX39_25265"
     CDS             2198..2716
                     /locus_tag="VHX39_25265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonopyruvate decarboxylase"
                     /protein_id="HEX3994497.1"
                     /translation="MPKQTWQARVYDALKTARVSIAGYVPDAGHAHLIQAAHADPGMT
                     AVVLTTEEEGIALSAGAWLGGQRAVLLMQSSGVGNCINMLSLPVTCRMPLLTLITMRG
                     EWGEFNPWQVPMGTATPHVLTQAGVHVRRADHPDDVAEMVAASAALAFDSHIPVAVLF
                     SQRLIGAKVFVK"
     gene            2713..3306
                     /locus_tag="VHX39_25270"
     CDS             2713..3306
                     /locus_tag="VHX39_25270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX3994498.1"
                     /translation="MSSSNRNDGMLDRREVAAALLRDPSDLLVVTGLGAATYDVGVLG
                     DREQNFYLWGAMGGTAMIGLGLALAQPTRRVLVITGDGEMLMGMGSLASIAAARAPNL
                     AIAVLDNARFGETGSQHSHTGLTTDLESVAAGCGWTATTTARDMAAVEALRPRLRAEP
                     LFAVIRISAEEKPRFIPPRDGAYVTERFRRALGIVEN"
     gene            3610..>3871
                     /locus_tag="VHX39_25275"
     CDS             3610..>3871
                     /locus_tag="VHX39_25275"
                     /inference="COORDINATES: protein motif:HMM:NF024923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HEX3994499.1"
                     /translation="MPVSVAPVVRKDVPNYLRGLGTVLALQTVQLRSEVDGVLLKVPV
                     TEGQDVRQGEVLAIIDPRPYKAALDAAAATKAQDEAQLVAAKA"
BASE COUNT          726 a         1239 c         1211 g          695 t
ORIGIN      
        1 ccgcgcctta tctctggcga tcaaccgcga ggacctgaaa gatctggtga tggacgggta
       61 cgccgtaccg accggacaat tgatgttgga gggccagagc ggctacgatc cggcgatccc
      121 agtggatcct tacgaccccg atcacgccag gagattactg gccgaaacgg gatataaggc
      181 gggcttcggc ctgagcttgc acgctccaga caatgggtac gtaaatcccg caaaattggc
      241 cgtcgcaatc gcgcggatgt ggaccagcat cggggtaaat tgccaggtcg aaattttgcc
      301 tgccgcagcc ttctttaccg gggcattgcg cggcgagttt tcgatgcgcc tcagtggttg
      361 gttatccgat accggcgagg caagcagcga tctgatcgaa cttgtcgcat cctccgatcc
      421 gggcaaaggc cgcggtgctg tattcacgcc ggacaaatat tccaatccga aagtcgatac
      481 gatcattgaa caggcactgg caacgatcga tcgggacaaa cgcgaatcgc tgtaccgtga
      541 ggccgagcgg ctggccatgc ccgacatgcc gatcattccg ttacatcacc aggtgaacct
      601 ttgggcggtt cgcgcgggcc tgtcattcca cgcgcggatg caggagcgaa ccaacgcctg
      661 ggatatcgaa ccccagtaac ggcaagcggg aacggtgaca tgactgtgac ggccgcgctc
      721 gccgcttccc cctggccgct tccccctggc ctcacccctg tgcgatggtc cggcccggac
      781 actggtccgc gaaccgaagg aggaaccaat gatcaagctc tacggcatgg gcagccccaa
      841 cgtcgtcaaa gtctacatcg cgttggagga actcggcctg ccttatgagg ttgctcccgt
      901 cgacgtgttc accggcaagc agttcgacgc cgaattcctg aagttgaatc cgaacgccaa
      961 ggtgccggtg attgtcgata gcgagggacc gggcggcaag ccgtatacgt gcttcgagtc
     1021 cggcgcgatt ttgctgtacc tggccgaaaa gaccggcaaa ttcctgtcgc acgacatggc
     1081 gacaaagtac gacgagatcc agtggctgat gacgcaaatg agcacggttg gcccgatgtt
     1141 cggccagcac gtgcacttca tccgatttgc tccgaaaggc aacgattatg cgcaaagccg
     1201 ctacacgact caggcgacgc gcgtctccga ggtcatcgag ggccgcctcg ctcaccatgc
     1261 ttatctgggc ggcgcgcatt atagcgtggc ggatatggcg accttcccat ggctgaggaa
     1321 tattccggcg ctgatgggcg acacggcggc agcgaaattc ccccacatca tggcctgggt
     1381 tggcaagatc agcgagcggc cggcggtgaa ggccgctctt gcgaaggtcg acgcggtgcg
     1441 cgccgcgacg acggcgttcg ataaggcggc ggctgaggac ctcgacaagg tgtttggacg
     1501 cggccggttc gccgcagact gagatcccgc tgcaggcggc gccggcccac ctccggcgcc
     1561 gcctgggctc agaacatgcc ctcggctctg cgatgcttct tccgcccagg aggttgccac
     1621 atcacacctg gaaaaccctt caagggtgcc agaggttcgc ccaaataggt ccattccggc
     1681 tgctcgtgga gggacatatg gtagcgcggc tcccgcccgg tgcgctccgt gaacaaggca
     1741 cgagggatgt tcaccatctg gggagagccc ttgctctcgt acgaaagtgg cgtcccgcac
     1801 cgcgtgcaga agcttctggt cgtcccctcc tgcaggtctt caaaccggct gatgctttca
     1861 gcacctcgca ggatacgaaa acggctgcgc caactgccga cataggttgc gtacgcgcag
     1921 ccctgggcgt gacggctggc gcgtgagtgg tcgtgccagg cccaacgggc gggaacgtcg
     1981 atctcaagcc gaacggcccc acacacgcat tgaccctccg attgggtcgt agcggatttt
     2041 ccaaccccgg ggaggcgtgt ttcgtcgcgc atgcgtgacc tcgaactcct aagggattcg
     2101 accgccgctt cacggaggcc ccacggccag cccttgcgat tgtcagcacc aaacttatcc
     2161 cttaccccgg catcgcacca cacgaaccgg agccccgatg ccaaaacaaa cctggcaggc
     2221 gcgcgtctac gacgctctca agaccgcccg cgtctccatc gccggctacg tccctgatgc
     2281 gggtcacgcg cacctcatcc aggccgcgca cgccgacccc ggaatgaccg cggtcgtcct
     2341 gaccacagag gaagaaggca tcgcactttc cgccggcgcc tggcttggcg gccagcgcgc
     2401 ggttctgctg atgcaatcct ccggcgtcgg caactgcatc aacatgctgt cgctgccggt
     2461 cacctgccgc atgccgctgc tgaccctgat cacgatgcgt ggcgagtggg gcgagttcaa
     2521 cccgtggcag gttccaatgg gcaccgccac gccgcacgtg ctgacccagg ccggcgtcca
     2581 tgtccgccgg gccgaccacc ctgacgacgt tgcagaaatg gtcgccgcct cggctgcgtt
     2641 ggcattcgac agccacatcc cggtcgcggt gctgttctcg caacggctga tcggcgccaa
     2701 ggtgtttgtg aaatgagctc atccaatcgc aacgatggaa tgctggaccg ccgcgaggtc
     2761 gctgccgccc tgttacgcga cccctctgac ctcctggtcg tcaccggact gggcgccgcc
     2821 acctatgacg tcggcgtgct cggcgaccga gagcaaaact tctacctctg gggtgcaatg
     2881 ggcggcacgg cgatgatcgg ccttggtctt gcgctggcgc aaccaacgcg ccgggtcctg
     2941 gtgatcaccg gagatggcga aatgctgatg gggatgggtt cgctcgccag catcgcggca
     3001 gcacgcgcgc ctaatctggc gatcgccgtg ctcgacaacg cgcgattcgg cgaaaccggg
     3061 tcgcagcaca gccacaccgg cctgaccact gacctggaat cggtcgccgc cggctgtggt
     3121 tggacagcga ccacgaccgc tcgcgatatg gcagcggtcg aggcgctgcg gcctcggctg
     3181 cgcgccgagc cactgttcgc cgtgatccgg atcagcgccg aggaaaagcc gcgcttcatc
     3241 ccgccgcgcg acggcgccta tgtcacagaa cggttccgcc gtgcccttgg aatcgttgaa
     3301 aactgatcat cgggccgcct gaccacgtgt tggcggctcg cgagacggta cgaaacactt
     3361 gtctgactgg cgccagccaa ggatttctga catattactg gttcgcgcaa aaagatgcga
     3421 atgtcgttag ccgcggactg cgtggattgc ggccgaggcg gcgcttgggc tgacgggtgg
     3481 atctaagaca tgttctttag gcgtcaagga cttacgaatg cctggtttgc aataggggcg
     3541 ctcgccctgg cttcctacct tcccggacct gcttttgcgc aagggggtgc cccctcaggc
     3601 ccgccgactg tgccggtcag cgttgcacct gtcgtgcgga aagacgtccc caactacctg
     3661 cgtggactcg gcacggtgct ggccttgcaa accgtgcaac tgcgcagcga ggtcgatggc
     3721 gtcctgctga aagtgccggt gaccgagggt caggatgtca ggcagggcga ggtgctcgcc
     3781 atcatcgacc cgcggccgta caaggcggcg ctcgatgctg cggccgccac caaggctcag
     3841 gatgaggcgc aactcgttgc cgcgaaggct g
//
LOCUS       DATAVD010001323         3033 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1055634, whole genome shotgun sequence.
ACCESSION   DATAVD010001323 DATAVD010000000
VERSION     DATAVD010001323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3033
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1055634"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..723
                     /locus_tag="VHX39_25280"
     CDS             <1..723
                     /locus_tag="VHX39_25280"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX3994500.1"
                     /translation="TGSVVAGKATERAALALRDHLLDLAAARWNVDRASCRLHAGWVE
                     SGGMRIDLDSLRSTAASELAGVGSSDGTPRSIAFNVQGFRVAVQPGTGEIQILHSVQA
                     ADAGRVLNPMQCRGQVEGGVAQAIGAALYEDLKIDATGRVVNPAFRHYHIPAWADLPR
                     TEVLFADTIDTVGPFGAKSMSESPYNPVAPARANAVADAVGIRYRELPLAPDRVFRTL
                     AEQTEPASGDSSATPPGSRSPP"
     gene            complement(692..2122)
                     /locus_tag="VHX39_25285"
     CDS             complement(692..2122)
                     /locus_tag="VHX39_25285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006558024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX3994501.1"
                     /translation="MAHEQQHYVNGQWVAPLQPVLLDVIDPSTEEAFTQIAVGGPKDV
                     DRAVAAARAAFPSFARTSRKDRLDLLRAILSEYEKRRNDIAECLSREMGAPLAFALRA
                     QSGTGTAHLTRMIEVLETYKFEDVEGSTLIAREPIGVVGLITPWNWPINQIVCKVAPA
                     IAAGCTMVLKPSEVAPLNAIIWSEVMHAAGVPAGVYNMVQGEGGVVGSAMSAHPDIDM
                     MSFTGSTRAGILVAQAAATTVKRVCQELGGKSANILLPDVDFQTAVTKGVVGMMGNSG
                     QSCNAPTRMFVPADRQDEVKAIAKAAAERVIVGDVNDAKTNLGPVVSEVQFNKIQRLI
                     QAGIDEGAELVTGGPGRPENLNRGYFVRPTVFAGVRNDMTIAREEIFGPVLSILPYKD
                     EAEAIRLANDTVYGLAAYVQSGDRAHANRVAAEMRAGNVFVNYPAGDTAAPFGGYKQS
                     GNGREYGKWALDDFTEIKAVIGYQAA"
     gene            2231..>3033
                     /locus_tag="VHX39_25290"
     CDS             2231..>3033
                     /locus_tag="VHX39_25290"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3994502.1"
                     /translation="MSVHPALNPGRVAVITGAASGIGLAAGKRFAAMGLKVCLADLSP
                     DALDGAAAEVAAISPLGSAGVLTVPTDVSRLDAVQALKDTVYQRFGEVAVLMNNAGTG
                     TGGGPYEHIDRWRQVLEVNLWGMINGVQTFTPAMLEQRTACAIVCTGSKQGITCPPGN
                     TAYNVSKAGVKVLTEALAHSLRNDDGARISAHLLIPGSTFTGMTRGGRTEKPAGAWTP
                     DQVAEFLVAGMNNGDFYILCPDNDVMRAVDERRILWSAGDIVENRPALSR"
BASE COUNT          536 a          947 c          973 g          577 t
ORIGIN      
        1 accggaagcg tggtcgccgg caaggcaacc gagcgtgccg cgttggcgct gcgggaccat
       61 ctgctggatc ttgccgcggc gcgatggaac gtcgatcgag cctcctgccg cctgcatgcc
      121 gggtgggtcg agagtggcgg aatgcgtatc gacctggatt cattacgctc gacggcggca
      181 tccgagttgg caggtgtggg cagcagcgat gggacgcccc gctcgattgc cttcaatgtg
      241 cagggcttcc gggttgccgt gcagcccggg accggcgaga ttcaaattct ccacagtgtg
      301 caggccgccg acgccgggcg cgtgctcaat ccgatgcagt gccgcggcca ggtcgaaggc
      361 ggtgtggcac aggcgattgg cgcggccctg tatgaagacc tgaaaatcga cgccaccgga
      421 cgcgtcgtta atccagcctt ccgccattac cacatccccg cctgggctga cctgccgcgc
      481 accgaggtcc tgttcgcaga caccatcgac actgtcggcc cattcggcgc caagtcgatg
      541 agcgaaagtc cctataatcc ggtggcaccg gcgcgggcca acgccgtcgc cgatgcggtc
      601 ggcatccggt atcgcgagct gcctctggcg cccgatcggg tgttccgcac tcttgcagag
      661 caaaccgaac ccgcgtcagg cgactcgtcc gctacgccgc ctggtagccg atcaccgcct
      721 tgatctcggt aaaatcatcc agcgcccatt tgccatattc gcgtccgttg ccggactgct
      781 tgtaaccgcc gaacggagcg gccgtgtctc cggccgggta gttcacgaac acgttgcccg
      841 cccgcatttc cgcggcgacg cgattggcat gggctcggtc gcccgactgc acgtaagccg
      901 ccagcccgta aaccgtatcg ttcgcaagac ggattgcttc ggcctcgtcc ttgtagggca
      961 ggatcgacag caccggaccg aagatctcct cgcgcgcgat ggtcatatcg ttacgcacgc
     1021 cggcgaacac tgtgggccgc acgaaatagc cgcggttcag gttttccggc cggccgggac
     1081 cgccggtgac cagttcggcg ccttcatcga tgccggcctg gatcaggcgc tggattttgt
     1141 tgaactgaac ctcactgacc accggaccga ggttggtctt cgcatcgttc acgtcgccaa
     1201 cgatgacgcg ttcggcagcc gctttggcaa ttgccttgac ctcgtcctgg cgatcggcgg
     1261 ggacaaacat gcgagttggt gcgttgcagg actgcccgct gttgcccatc atcccgacca
     1321 cgcccttggt taccgcagtc tggaaatcca catcgggcaa caggatgttt gccgatttgc
     1381 cacccagttc ctggcagacg cgcttgaccg ttgtggcggc ggcctgggcg acgaggatgc
     1441 cggcgcgcgt cgacccggtg aacgacatca tgtcgatgtc gggatgcgcc gacatcgcac
     1501 tgccgaccac cccgccctcg ccttgcacca tgttgtagac gccggccggc acgcccgcag
     1561 cgtgcatcac ttccgaccag atgatggcat ttaacggtgc cacctccgag ggtttcagca
     1621 ccatcgtgca accggcggcg atcgcgggag cgactttgca aacgatctgg ttgatcggcc
     1681 agttccatgg cgtgatcaat ccgaccacac cgatcggctc acgcgcgatc agggtcgagc
     1741 cctcgacatc ttcgaatttg taggtttcca ggacctcgat catccgagtg agatgagcgg
     1801 tgccggtgcc ggactgcgcc cgcaatgcga aggccagtgg cgcgcccatt tcgcgcgaca
     1861 gacactcggc aatatcgtta cggcgttttt cgtattcgga caggatggcg cgcagcagat
     1921 ccagccggtc cttgcgcgag gtgcgcgcga acgacggaaa tgcggcacgc gcggcagcaa
     1981 cggcgcgatc gacgtctttc gggccgccga cagcgatctg ggtgaatgct tcctcggtgg
     2041 agggatcgat tacgtcaagc agaaccggct gcaatggtgc cacccattgt ccgttcacgt
     2101 agtgctgctg ttcatgtgcc atgcggattt cctccaaggg gactgcgtct gggcttcggg
     2161 ttgccggcgt tatatacgtg ccggcatggc gaacggaaag gtccgccgat ctcagcaaag
     2221 gaaccgcagc atgagcgttc acccagctct gaatccaggc cgtgtcgcag tgatcaccgg
     2281 ggccgccagt ggtatcggtc ttgcggccgg gaaacggttc gccgccatgg gtctcaaggt
     2341 ttgtctggcg gatttgtcgc ccgacgcatt ggacggcgcc gcagcggagg ttgctgcaat
     2401 ttcacctctg ggctcggcgg gagttctgac cgtgcctact gatgtcagcc gcctcgatgc
     2461 cgtccaggcg ttgaaggaca ccgtctacca gcggttcggt gaggtcgctg tactgatgaa
     2521 caacgccggg accggaaccg gcggcggtcc gtatgagcat atcgaccggt ggcgacaggt
     2581 gttggaggtc aatctttggg gcatgatcaa cggcgtgcag acattcactc cggcgatgct
     2641 ggagcaacgg accgcctgcg cgattgtttg caccggctct aagcaaggga tcacctgccc
     2701 gccgggcaac accgcgtaca atgtcagcaa ggccggagtg aaggtgctga ccgaagccct
     2761 cgcccacagt cttcgaaacg atgacggcgc gcgtatttcc gcgcatttgc tgataccggg
     2821 gtcgacgttc accggaatga cccgcggtgg gcgaacggaa aagccggcgg gcgcctggac
     2881 gccggaccag gtggcggagt ttcttgttgc gggtatgaac aatggcgact tctacatcct
     2941 gtgcccggac aacgacgtga tgcgggcagt cgacgagcgg cgcattttgt ggtcggccgg
     3001 agatatcgta gaaaaccggc ccgctttgtc gcg
//
LOCUS       DATAVD010001324         2684 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_131485, whole genome shotgun sequence.
ACCESSION   DATAVD010001324 DATAVD010000000
VERSION     DATAVD010001324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2684
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131485"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..271
                     /locus_tag="VHX39_25295"
     CDS             <1..271
                     /locus_tag="VHX39_25295"
                     /inference="COORDINATES: protein motif:HMM:NF040438.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase domain-containing protein"
                     /protein_id="HEX3994503.1"
                     /translation="WAVRVPGYAEGDLFTVQGSYIPFPATEAERRASGDPRRPIEARY
                     PSHAAWASQVISATEQLVADRLLLREDADRLIAAARESFDVLAAL"
     gene            652..1104
                     /locus_tag="VHX39_25300"
     CDS             652..1104
                     /locus_tag="VHX39_25300"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX3994504.1"
                     /translation="MLETREGGCHCGQVRFRAQVDLDLLSQCSCTVCTKKGILHLPIM
                     QADFTLLRGKNALTVYTFETGVAQHPFCTRCGMHPFYVPRSQPDKVTVNARCIDGIDG
                     PALKPTRFFDGRHWEDAQRNRIAGGGHVAPPGWHGAATLKAILDSAPE"
     gene            1134..2294
                     /locus_tag="VHX39_25305"
     CDS             1134..2294
                     /locus_tag="VHX39_25305"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3994505.1"
                     /translation="MTIPDIVAAAIRLAPAVKAARDDAERLRQTPPALAEAITKAGIY
                     QMYLPRSMGGPETPPLVAFRVVEELSKVDGSVGWCAMIATALSLNAGRLPAEVGRELA
                     GTPADYRGAGSARAGGKAWAVAGGFRVKGQWNFASGIQNANWLYCTCVMMDGEKPHLS
                     PAGAPVLRAVWVPRKQVNIVDTWSVMGMRGTGSQDFTVDDVFVPSERSCLSDAPPCET
                     GPLFNPRAWYVHVWTPSAANALGVARGAIDSLAELAETEASTLSTQLLRDRPMVQARI
                     GEAEAIVNAARAYVFDAVGRLWDTLCAGDTPSDREIAQARLALVHAMHESVRAVDKVF
                     HAAGTNAIYTRMPLERAFRDVHVAVQHGAALPVYFESAGKVLMGLRPTEPGW"
     gene            complement(2355..>2684)
                     /locus_tag="VHX39_25310"
     CDS             complement(2355..>2684)
                     /locus_tag="VHX39_25310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994506.1"
                     /translation="DEISELLLRTRTHMMHVRHEYNPVDFIIDPVMLNPWTNPAVGDA
                     EALAFVLATGSLFGSPARVREQVDALRDAGVRHLLCQTGFGDMSHEQNLQSMRRFGEQ
                     VMPSFAS"
BASE COUNT          498 a          802 c          855 g          529 t
ORIGIN      
        1 ttgggccgtt cgggtgccgg gttatgccga aggcgatctg ttcaccgtgc aggggtcata
       61 cattccgttc ccggcaaccg aggccgaacg tcgcgcgtcc ggcgaccctc gacgtcctat
      121 cgaggcccgc tatccctcac acgcggcctg ggcttcgcaa gtgatttcag caacagaaca
      181 actggtggcg gaccggttgc tgttgcggga ggatgctgac cgactgattg ccgcggcgcg
      241 ggagtccttc gatgtgttgg cggcgttatg aaacgccggt aatggccggc gggatcgtgg
      301 gccattgaga ggacccgcgc gcttgcaact gggtcgacca tccgatctta tctcgcctta
      361 tcggtgttca tctgcttcaa agattttcaa cctgctgctc attgcatgaa gcccttgggt
      421 caccctgagc ggtgagaaat aagaaaggct tttaaacgca aagcaacaaa ggtgaagcat
      481 ggatacggag cgctacggca ggtcccggag tcgataggcg aacgacacgc tgacaacgcc
      541 gcttgggctt tgagccagcg ctcaggctca ggtgcgttca ttcggcggac cggtatggac
      601 gccggcacgc caatttgcga cacaaccagg gttcatcacg agggcccgta catgctcgaa
      661 acaagggaag gcggctgcca ctgcggccag gttcggttcc gcgcccaggt cgatttagac
      721 ctgctgtcgc aatgcagttg cactgtctgt acgaagaaag ggatacttca tctcccgatt
      781 atgcaggccg attttaccct gttgcgtggc aagaacgcac tgaccgttta cacgtttgaa
      841 accggcgtgg cgcaacaccc gttctgcacg cgttgcggaa tgcatccgtt ttacgtgccg
      901 cgttcgcagc cggacaaggt cacggtgaac gctcggtgca tcgatggcat cgatgggccg
      961 gcattgaagc cgacgcggtt tttcgatggt cgccactggg aggatgcaca acgcaatcgg
     1021 atcgccggag gcggccacgt cgcgccgcct ggatggcacg gtgctgccac tttgaaggca
     1081 attctggaca gcgcgcccga gtagcgcggg tccgaccctg taaggatacc gatttgacca
     1141 tccccgatat cgtcgccgct gcgatccgcc ttgcccccgc cgtgaaagcc gctcgcgacg
     1201 atgccgaacg gcttcggcaa acgccgcccg cgctggccga agcaattacc aaggctggca
     1261 tctaccaaat gtatttgccg cgctcgatgg gaggtcccga aacgccgccg ctggttgcct
     1321 ttcgcgtggt ggaggaactg tcgaaagtcg atggttctgt cggttggtgc gccatgatcg
     1381 ccaccgctct gtcgctgaac gccgggcgcc tgccggccga ggtaggacgt gaactcgcgg
     1441 gaacgcccgc cgattaccgc ggagccggct cggcgcgggc aggtggcaag gcatgggccg
     1501 tcgccggagg ttttcgggtc aaaggtcagt ggaattttgc cagtggcatc cagaacgcaa
     1561 attggttgta ttgcacctgc gttatgatgg acggcgagaa gccgcatttg tcgcccgccg
     1621 gtgcgcctgt gctgcgtgcg gtgtgggtac cgcgcaagca ggtgaacatc gtggacacct
     1681 ggtcggtgat ggggatgcgt ggcaccggca gtcaggattt cacggttgac gacgtgttcg
     1741 tgccgtcgga acgcagttgc ttgtcggatg cgccgccgtg cgaaacgggc cctttgttca
     1801 acccgcgcgc ctggtatgtt cacgtctgga ccccttctgc cgccaacgca ctgggcgttg
     1861 cacgcggcgc catcgacagc ctggccgagt tggccgagac cgaagcttcg accctgtcga
     1921 ctcagttgtt acgcgaccgt ccgatggtgc aggctcgcat cggcgaggcc gaggctatcg
     1981 tcaacgccgc gcgagcctat gtgttcgatg ccgtcggccg gctgtgggat acgctgtgtg
     2041 ccggagacac gccatcggac cgcgaaattg cgcaggcgcg tctggcgctg gttcacgcga
     2101 tgcacgagtc agttcgcgcc gttgacaaag tgtttcatgc agcggggacc aatgcgattt
     2161 acacgcggat gcctctggag cgggcgtttc gtgacgttca tgtcgcggtt cagcatggcg
     2221 cagcgctgcc ggtttatttt gagtctgccg ggaaggtgct gatggggctg cggccgaccg
     2281 aacccggctg gtgatcggac ggcaccccgt catcctccaa ctcagccgac cccgcaccgg
     2341 gtcatgacgc gcctctacga ggcaaaagac ggcatcacct gttcgccaaa ccgccgcatg
     2401 gactgaaggt tttgctcgtg gctcatgtcg ccaaatccgg tctggcacag caaatgccgc
     2461 acgccggcat cgcgcagagc atcaacctgc tcgcgcaccc gtgccggcga accaaatagc
     2521 gagccagtcg ccagaacaaa tgccaaagcc tccgcatcgc cgaccgcggg attggtccac
     2581 gggttcagca tcacagggtc aatgatgaaa tccaccgggt tgtactcgtg gcgcacatgc
     2641 atcatatgcg tccgtgtccg caacagcagt tcagagattt catc
//
LOCUS       DATAVD010001325         4292 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2919602, whole genome shotgun sequence.
ACCESSION   DATAVD010001325 DATAVD010000000
VERSION     DATAVD010001325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4292
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2919602"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(174..1103)
                     /locus_tag="VHX39_25315"
     CDS             complement(174..1103)
                     /locus_tag="VHX39_25315"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010666626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEX3994507.1"
                     /translation="MRIFHDWRRLPDDARGATVALGNFDGVHLGHATVLRAAHAARPD
                     APLAVLTFEPHPREVFRPDDPPFRLTLSAERADALAALGCTLLYELPFNQVFSLMMAD
                     TFMSEVLHQGLDARHLTTGVDFAFGHRRGGDAAYLAARAEALGMGVTRVPALTDSGGP
                     LSSTRIRRALQDGYPERATAELGRPWAIRGEVAHGDKRGRTIGFPTANVALGRHLEPA
                     RGVYAVTTRLSDGTMYDGVANLGRRPTVNEGPESRLEVNLFDFSGDIYGAEITVALIA
                     YIRPEVRFPGLDALKAQIAADAEEARRLLSVRR"
     gene            complement(1103..1525)
                     /locus_tag="VHX39_25320"
     CDS             complement(1103..1525)
                     /locus_tag="VHX39_25320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX3994508.1"
                     /translation="MSNGYRFEDLAVGQTASLAKTITEADILLYSAVSMDTNPLHLDA
                     EAAKQGPFGERIAHGMLAAGLISAVLGTRLPGPGAIYMRQSLRFALPVKIGQTVTATV
                     EVMSLNPEKHRATLRTVCTVGDDLVIEGEAYVQVPSRG"
     gene            complement(1589..2035)
                     /locus_tag="VHX39_25325"
     CDS             complement(1589..2035)
                     /locus_tag="VHX39_25325"
                     /inference="COORDINATES: protein motif:HMM:NF020387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RES family NAD+ phosphorylase"
                     /protein_id="HEX3994509.1"
                     /translation="MDLWRLCRRPHADLSGEGARIYGGRWNSPGRPVVYLAEHPALAA
                     LEVRVHLDLPFELLPSDFVLMRVRLPEGLISEIASVSGPETVATGDAWLVEARSVALR
                     VPSVLLPNAWNVLLNPRHPEIASASIDSIEAFHFDPRLWEPLAAER"
     gene            complement(2035..2427)
                     /locus_tag="VHX39_25330"
     CDS             complement(2035..2427)
                     /locus_tag="VHX39_25330"
                     /inference="COORDINATES: protein motif:HMM:TIGR02293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin Xre/MbcA/ParS toxin-binding
                     domain-containing protein"
                     /protein_id="HEX3994510.1"
                     /translation="MKGISPPRGVSEGVLLPLRQGYSVDVIDRVLDDGRLSMAELDRL
                     VLPRKTLSHRRILGSLTPDQSDRLSRVLRIIDDADETFGDPAKARAWLRRPNQLLDGE
                     TPLGRLDTDFGTRQVEAILGRIAHGLAA"
     gene            2521..3666
                     /locus_tag="VHX39_25335"
     CDS             2521..3666
                     /locus_tag="VHX39_25335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HEX3994511.1"
                     /translation="MPGDAVGSSEDLLAELATWVRRETPTTDAAAVNGLMDVAERELA
                     QAGAALTRVPGTAGFGDSLIARTPGPARSRGVKPILVAGHLDTVWAHGTLDKMPYHVN
                     GEKAHGPGIYDMKAGSFLAFHAVRAILHHRIATRHPITLLLTPDEEVGSPSSRALIER
                     EAANAAAVLIPEPAGKGGACVTSRKGVGRFTLRVKGKASHAGTGWGDGASATVELAHQ
                     ILALHKMVEPDDGILINTAPVWGGTRRNVVAAEAGCEIDLRVSSHRDGELMTARILGL
                     ESRIAGCTVVVEGGMNRPPYVENPAIVALYEKARALAGQVGLTLPRQHRGGGSDGNFT
                     AAMGIPTLDGLGCPGAGAHAVHEHILWRQLAPRAALMAGLLETLDEV"
     gene            3875..4186
                     /locus_tag="VHX39_25340"
     CDS             3875..4186
                     /locus_tag="VHX39_25340"
                     /inference="COORDINATES: protein motif:HMM:TIGR02118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EthD family reductase"
                     /protein_id="HEX3994512.1"
                     /translation="MIKVSVLYPAGETAKFDMDYYCKSHMPMVQQKLGAACKSTAVEQ
                     GLGGAAPGAPPTYVAMGHLYFDSVEAFQTAFTPHAAAIMADIPNYTNIQPVIQISEVK
                     M"
BASE COUNT          824 a         1341 c         1384 g          743 t
ORIGIN      
        1 gatcggaaat gatcccaact ttcaacgatc cggctccggt tttaaaacac gatctgcgat
       61 gcacgccgcg cgcgatacta aggggtatgc cgatcgagga atggcgtcac ccgcatccgt
      121 tgttgctccc tgggctcgcg ccattttgac gtcggcataa tcaaactccc gcgttatcgt
      181 cgcacactca gcaaccgcct tgcttcctct gcgtcggcgg caatttgcgc cttcagtgcg
      241 tccagtccgg gaaaccgcac ctccggtctg atataagcga tcaatgccac ggtaatctcg
      301 gcaccgtaaa tgtcgccgga gaaatcgaac aggttgactt ccaaccggct ctccggacct
      361 tcgtttaccg tcggccggcg acccaggttg gccacgccgt catacatcgt gccatctgac
      421 aaacgagtcg tcactgcgta gaccccacgc gccggctcca gatgccggcc aagtgccaca
      481 ttcgctgtcg ggaacccaat ggtgcgtccg cgtttatcgc catgcgccac ctcaccgcga
      541 atggcccagg gacggccgag ctcggcggtc gcgcgttcgg ggtagccgtc ttgcagcgct
      601 cgccggatac gggtcgaaga caacggcccc ccggaatccg tcaacgccgg cacacgggtg
      661 acgcccatac ccagagcctc ggcccgcgcc gcaaggtacg ccgcatcgcc gccacggcgg
      721 tggccgaagg caaagtccac gccggtagtc aaatgccgtg catccaggcc ttgatgcagc
      781 acctcgctca tgaacgtgtc ggccatcatc aggctgaaca cctgattgaa cggcagttcg
      841 tagagcagcg tgcaaccgag agcggccagc gcatcggcac gttcggcgga taacgtcaac
      901 cggaacggag ggtcgtcagg gcgaaacact tcgcgcggat gtggctcgaa cgtcagcacc
      961 gccagcggcg cgtcgggccg tgccgcatgc gccgcgcgca gcaccgtggc atgccccagg
     1021 tgcaccccgt cgaaattgcc cagagcgacc gtggcaccac gggcatcgtc aggcagccgg
     1081 cgccaatcat ggaaaatccg catcagccgc gtgaggggac ctgcacgtag gcctccccct
     1141 cgatgaccag gtcatcgccc accgtgcaca cggtccgcaa tgtcgcgcgg tgcttctcgg
     1201 ggttgagcga catgacttcc accgttgccg tgaccgtctg gccgatcttc accggcagcg
     1261 cgaaccgcaa gctctgtctc atatagatcg ctcctgggcc aggcaggcgt gtgccgagga
     1321 cggctgagat caacccggcg gccagcatgc catgcgcgat gcgctcgcca aaaggcccct
     1381 gtttcgcggc ctcggcgtcg agatgcagcg ggttggtgtc catgctgacg gcagaataca
     1441 gcaggatatc ggcctcggtg atggtcttgg cgaggctcgc tgtctggccg acggcaagat
     1501 cctcgaagcg ataaccgttg ctcatggtgc atcctgttgt tgcgccgggt ctatctggcg
     1561 cgccaaggcc gcaggatcaa ccttggcgtc accgttcggc agccaacggc tcccaaaggc
     1621 gcgggtcgaa atggaatgct tcaatgctgt cgatgctggc actggcaatc tcgggatggc
     1681 gcggattgag cagcacattc caggcgtttg gcagcaatac agagggcacc cgcagcgcca
     1741 ccgagcgcgc ctcgacgagc catgcatcgc cggttgccac agtttccggg cccgaaacgg
     1801 atgcaatctc gctgatcaga ccttccggca atcgcacgcg catcaacaca aaatcgctgg
     1861 gaagcagctc aaacggcaaa tcgagatgga cccgcacctc cagcgccgcc agcgccggat
     1921 gctcggccag gtacacgacc ggccgtcccg ggctgttcca tcgtccgccg tagattcgag
     1981 cgccttcgcc ggagagatcc gcatgtgggc ggcggcatag ccgccataag tccatcaggc
     2041 cgccaacccg tgcgcgatgc ggcccagaat ggcttccacc tgacgcgtgc cgaaatccgt
     2101 gtcgagccga ccgagcggtg tttcgccatc caacaactgg ttcggccggc gtagccaggc
     2161 acgggctttc gccggatcgc cgaacgtttc gtccgcgtca tcgatgatgc gcagcacacg
     2221 gctgagccgg tcggactggt ccggagtcag tgaacccagg atccgacggt gcgacaatgt
     2281 cttgcgcggc agtacgagcc gatcgagttc tgccatcgac aacctcccgt catccaggac
     2341 ccggtcaatc acgtcgaccg aataaccctg tcgtaacggg agcaggacac cttcggatac
     2401 gccacggggt ggtgatatgc ccttcatgcg cgtgcatatc gcccctccgg ccggctatgt
     2461 caagcctttc cgaacccagg atcgtcggtc atgctgcacc gacctacaaa ggaccggaca
     2521 atgccaggcg atgccgtggg aagctctgag gacctgttgg ccgaactggc aacctgggtc
     2581 aggcgcgaga cgcccaccac cgatgcggca gcggtcaatg gcttgatgga cgttgccgag
     2641 cgcgaactgg cacaggctgg tgcggcgttg actcgcgtac ctggtacggc gggcttcggt
     2701 gatagtttga tcgcacgcac ccctgggccg gccaggtcgc gaggtgttaa accgatcctg
     2761 gtcgcagggc acctcgacac cgtctgggcg cacggcacgt tggacaaaat gccctatcac
     2821 gtgaatggcg agaaagcgca cgggccgggc atctacgaca tgaaggccgg cagtttcctg
     2881 gcatttcacg ccgtccgtgc gatcctgcac catcgcatcg ccacgcgcca tccgattacc
     2941 ctgctgctga cgccggacga ggaggtcggc agcccctcca gccgcgcact gatcgaacgg
     3001 gaggccgcca atgcggcggc ggttttgatc cctgaaccgg caggcaaggg cggcgcctgc
     3061 gtcacctcgc gcaaaggtgt ggggcggttc acgttacggg tgaaaggcaa ggcctcgcat
     3121 gccggcaccg ggtggggaga cggtgcctcg gcgacggtgg aattggcgca tcagattctg
     3181 gcactgcaca agatggtgga gccggacgac ggcattctga tcaacaccgc gccggtctgg
     3241 ggtggcacgc ggcggaatgt ggtggcggcc gaggcgggtt gcgagatcga cctgcgggtc
     3301 agctcccacc gcgacggcga gctgatgacg gcacgcattc tggggctgga atcgcggatc
     3361 gcaggatgca cggtggtggt cgagggtggg atgaaccggc cgccttatgt cgaaaatcct
     3421 gcgatcgtgg cgctgtatga gaaggcgcga gcattggcag ggcaggtcgg gctgactttg
     3481 ccgcggcaac atcggggtgg cggctcggat ggaaatttca ccgcggccat ggggattcca
     3541 acgttggatg gtctgggctg cccaggggcg ggggcgcacg cagtgcatga gcatattctg
     3601 tggcggcaac tggcaccgcg ggcagcgctg atggcgggat tgctggagac gctggacgag
     3661 gtgtgacccg agccgcagtg gctgcgaggc acagtggtcg tctgccaccg tgcccgggca
     3721 cacggccgca tcgctttgat ggaactcgtg ttctgcgacc cgaatgagtt gatgcaggat
     3781 gcgaggcggc tatgtgcgtc ggggaacctc gggtaatgtc gcgttcgtcg ctgcagcaat
     3841 ggagctggca gcatgaccga gggggaacca tgcgatgata aaggtgagcg tactctatcc
     3901 ggctggtgaa accgcaaagt tcgatatgga ttactattgc aagagccaca tgccgatggt
     3961 gcaacagaaa ctcggcgcgg cctgcaagag cacggcagtg gaacaaggtc tggggggtgc
     4021 cgctcccggc gcaccgccga cctatgtggc gatgggtcat ttatatttcg attcggtcga
     4081 agcatttcag actgcattca cgccgcacgc tgccgcgatc atggcggaca ttccaaacta
     4141 caccaacatc cagccggtca ttcagatcag cgaggttaag atgtaaaccg gtgcgggtag
     4201 cgccgccggt gactggccgc accggcggct tgtatgacgc gtgagatggc atgttcgatc
     4261 atcgcccgca acgaacacgg agactgccgc cg
//
LOCUS       DATAVD010001326         2651 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2549558, whole genome shotgun sequence.
ACCESSION   DATAVD010001326 DATAVD010000000
VERSION     DATAVD010001326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2651
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2549558"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..859
                     /locus_tag="VHX39_25345"
     CDS             <1..859
                     /locus_tag="VHX39_25345"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994513.1"
                     /translation="RDEAKFADYFEANPRMRAVGPPSMPVCVAPLRYVGQADLAKDLD
                     NFKAALAGVSVAEGFLPANTPGTIEHWMLNEHYPSDEAFVFAIADAMHEEYQAIVDAG
                     FLLQIDDPDLPDGWNCLPGISVTEYRKYATLRVDALNHALRGIPPEKVRLHVCWGSHH
                     GPHHDDIPLRDIIDLIFRVNAGSFSIEASNPCHEHEWQVFEDVKLPDGATLIPGVVGH
                     CTDFVEHPDLVAERLVRYARLVGRENVLAGTDCGLGTRVGHPSIVWAKFNAMAEGARR
                     ASKIMWGSR"
     gene            856..1848
                     /locus_tag="VHX39_25350"
     CDS             856..1848
                     /locus_tag="VHX39_25350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3994514.1"
                     /translation="MSKLKLSIAVGDYDRVRPLVDGSVQIDGVDPVFMLLEPEEIFFR
                     AFRHADFDVTELSMSSFSVKTANGDCPYVGVPVFPSRAFRHNSIYIRTDRGITRLEDL
                     KGKRIGVPEYQVTANVWTRAVLEDEHGVKPSDVTWIRGGYDHPGRVEKITLNLPSDVR
                     IEDAPEGATISGMLANGEIDAVIGPRAPACFSNGHPQVAWLYPDPAAAAAAWFRRSKI
                     FPIMHILGVRRSLAEQHPWLPTALMKAFEQSKALALAALAQVAASKVTLPFIDEQLHA
                     ARRLMGEDYWSYGLATNRHVLEVFLRRHYAEGLSSRLLSPEELFHSSTHETFRI"
     gene            complement(1856..2401)
                     /gene="rsmD"
                     /locus_tag="VHX39_25355"
     CDS             complement(1856..2401)
                     /gene="rsmD"
                     /locus_tag="VHX39_25355"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010667389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEX3994515.1"
                     /translation="MRIVAGAWRGRRLIAPSGTATRPTADRVRQALFDMLMHAAWAGR
                     AVIEGALVLDVFAGTGALGLEALSRGAAHAWFVESARPAQVALRANIGACGAGDRCEV
                     LPIDALSVPAGERAGVVFLDPPYGQDLVARALARLRAVGRVGPGSLIVAETGRNDPAL
                     AVVPLAERAHGAARLTIWREG"
     gene            complement(2402..>2651)
                     /locus_tag="VHX39_25360"
     CDS             complement(2402..>2651)
                     /locus_tag="VHX39_25360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEX3994516.1"
                     /translation="GLDAKKGDNAWLTVSLREGRNREIRRVMAYLGLDVTRLIRIAYG
                     PFQLGTLPRGGLDEVPTRVLREQLPKPDAAERPARRPR"
BASE COUNT          485 a          845 c          826 g          495 t
ORIGIN      
        1 gcgcgatgaa gcgaaattcg ccgattattt cgaggcgaat cctcggatgc gtgctgtggg
       61 tccgcccagt atgccggttt gcgtggcgcc gctgcgctat gtcgggcagg ccgatctcgc
      121 caaagatctt gataatttca aggcagcgct ggccggtgtc agcgtggccg agggcttcct
      181 gccggccaac acgccgggca cgatcgaaca ctggatgctg aacgaacatt atccgtctga
      241 cgaggcgttc gtgttcgcca tcgccgatgc gatgcacgag gaatatcagg caatcgtcga
      301 tgccggcttt ttgttgcaga ttgacgatcc tgatttgccg gatggctgga actgtttgcc
      361 gggcatcagc gtgacggaat atcgtaaata cgcaacgctg cgggtcgatg cattgaacca
      421 cgcgctacgc ggcattcctc cggaaaaggt ccgcctgcat gtctgctggg gcagccatca
      481 cggtccgcat cacgacgata ttccgttgcg ggacatcatc gacctgatct tccgggtcaa
      541 tgccggcagt ttttcgatcg aagcctccaa tccatgccat gagcatgagt ggcaggtgtt
      601 cgaagacgtg aagttgccgg acggtgccac cttgatccca ggcgtcgtcg gccattgcac
      661 cgatttcgtc gagcatccgg acctggtggc cgaacggctg gtgcgttacg ctcggctggt
      721 cggccgagag aacgtcctgg cgggcaccga ttgcggactc ggcacccgtg ttggccatcc
      781 ctcgattgtc tgggccaagt tcaatgcgat ggcggagggg gccaggcggg catccaaaat
      841 catgtggggc tcacgatgag caagttgaaa ctttcgatcg cagtcggcga ttacgaccgg
      901 gttcggccgc tggtggacgg ttcggtgcaa atcgacggcg tcgacccggt gttcatgctg
      961 ctggagccgg aagaaatctt ctttcgcgcc ttccgccacg ccgacttcga tgtcaccgaa
     1021 ctgtcgatga gcagcttctc ggtgaagacg gcgaatggcg actgtccgta tgtcggcgtg
     1081 ccggtattcc cgtcgcgcgc gttccggcat aattcgatct atatccgcac cgaccgtggg
     1141 atcacccggc tggaggacct gaagggcaaa cgcatcggtg tgccggaata tcaggtcacg
     1201 gccaacgtct ggacccgcgc cgtgctggaa gacgagcacg gcgtgaaacc ctccgacgtg
     1261 acctggatcc gcggtggtta tgaccatccc ggccgcgtcg agaaaatcac gctgaacctg
     1321 ccgtccgacg tgcggatcga ggacgcaccg gaaggcgcca cgatctccgg catgctggca
     1381 aacggcgaga tcgatgcggt gatcggtcct cgcgcgccgg cctgtttcag caacggtcat
     1441 ccgcaggttg cgtggctata tcctgaccct gccgccgcgg ccgccgcctg gttccgccgt
     1501 tccaagatct ttccaattat gcacattctg ggagttcgcc gcagcctggc cgagcaacat
     1561 ccctggctgc cgaccgcctt aatgaaggcg ttcgagcagt cgaaggccct tgccctggcg
     1621 gcgctggcgc aggtcgccgc gtccaaggtg acgctgccgt tcattgatga acaattgcat
     1681 gccgcgcgac ggctgatggg cgaagattac tggtcgtatg gcctggcaac gaatcgccac
     1741 gtgctggagg tgtttctgcg gcggcattac gccgaggggt tgtcgtcccg attattgtcg
     1801 cctgaggagt tgtttcattc gtcaacccac gagacgtttc ggatatagat cgggttcaac
     1861 cctcgcgcca gatcgtcaac cgcgcggcgc catgggctct ctcggcaagc ggcacgactg
     1921 ccagcgcagg atcattcctg ccggtctccg ccacgatcag actgccgggc ccgacgcggc
     1981 cgaccgcgcg caatcgcgcc agagcacgcg ccaccaaatc ctgcccataa ggcggatcga
     2041 gaaacacaac gcccgctcgt tcgccggcgg gcacggacaa tgcgtcgatc ggtagcacct
     2101 cgcaccgatc gcccgcgccg cacgccccga tgttggccct caacgccacc tgggccggac
     2161 gcgctgattc cacgaaccag gcgtgggccg ccccgcgaga caacgcctcc aaccccagtg
     2221 cgccggtgcc ggcgaacacg tccagcacca aagcgccttc aatgacagcg cggccagccc
     2281 atgccgcgtg catcaacatg tcgaacaatg cctgacgcac gcggtcggcg gtcggtctcg
     2341 ttgcggtacc ggacggagcg atcaaccggc ggccgcgcca cgcaccggca acgatgcgca
     2401 ttcagcgagg ccggcgggcc ggacgttccg ccgcgtccgg cttcggcagt tgctcacgca
     2461 gcacgcgagt ggggacctca tccaggccgc cgcgcggtaa ggtgcccaac tggaacggtc
     2521 cgtaagcgat ccggatcaat cgtgtcacat ccagcccaag atacgccatc acccggcgga
     2581 tttcgcgatt gcggccctcc cgcaaactga ccgtgagcca ggcgttgtcg cccttctttg
     2641 catcgagacc g
//
LOCUS       DATAVD010001327         2659 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_686289, whole genome shotgun sequence.
ACCESSION   DATAVD010001327 DATAVD010000000
VERSION     DATAVD010001327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2659
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_686289"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..2501)
                     /locus_tag="VHX39_25365"
     CDS             complement(3..2501)
                     /locus_tag="VHX39_25365"
                     /inference="COORDINATES: protein motif:HMM:NF025851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 95 protein"
                     /protein_id="HEX3994517.1"
                     /translation="MDASRREFLKGAAAITATSALNPGLPEHDEGNSALLWYRSPAKH
                     WMESLPIGNGRLGATVFGGVDRELIHLNEDTLWSGPSDEQWNNPHAYDHLAEVRRLLM
                     DDRDYAAADRVTRLMQGPYNQSYLPLCDLNISFPPTGNFSQYRRELDLDTGILTVSYT
                     ADGARYIREIFCSFPAQLVVLRLTCDQPRRLSCTASLSSLLRTNFAGSEGDDFVLRGK
                     APRHVDPNYLTKSLDPVIYDDALGKGMYFEVRVRGLPDQGNLSFPEGSMVIRGATSAT
                     LLISAATGYKQFGAIPDGSPEEIADSNTLYVNKASKSSYPQLRAEHIQDHQSLFRRVS
                     LSLGEAITPRTSTGERLRQLATRDEPQFAALYFQFARYLMIASSRPGTQPANLQGIWN
                     NKVRPPWSSNWTLNINAQMNYWLAEVGNLSELHKPLFDLTDHLSVTGRETARVYYGLD
                     GWTAHHNADLWAEAAPVGNQTGDPVWANWPMGGAWLCRHLWEHYVYGLDTQFLERRAY
                     PVMKAAAEFMLGWLVPDHQGRLVTAPSVSPETHFIVEGRRCGVSVASTMDMAIIWDLF
                     TNCIEAAKILNIDESFRSRLMAARGRLLPYQVGKAGQLQEWSEDFVTSDPGIGHVSQL
                     FPVYPGRQITPRSPGGFAQAASVSLEDRIRHGSGVAAWPCGWYACLWARLGEAERAHQ
                     QVLNMFRNSTTLNLWNGSVNDDLFHDELFQIDGNFGVAAGIAEMLLQSHEGYIQFLPA
                     LPPAWPEGSFKGFRARNAVDVSLMWRNSQAVSAVMRAHTDGERCLRAPEGQRVAAIRC
                     RGKRVGMRTLECAIVSVDFKKDSHYEVTFTGRSS"
BASE COUNT          571 a          792 c          732 g          564 t
ORIGIN      
        1 ggctaagaac tcctcccggt gaatgtaact tcgtaatgag aatccttttt gaagtccaca
       61 gagactatcg cgcactccag tgtccgcatg ccgactcgct tcccacgaca ccggatggct
      121 gcaacccgct gcccctccgg agcacgcaag catcgctcac catctgtatg cgcccgcatg
      181 accgcggaca ccgcttgcga attccgccac atcagactga catctacggc attgcgtgcg
      241 cgaaatcctt tgaacgagcc ttccggccat gccggcggta atgcaggaag gaactggata
      301 taaccttcgt ggctttggag cagcatctct gcgatcccgg cggcgacgcc gaagtttcca
      361 tcgatctgaa agagttcgtc gtgaaacagg tcatcgttca cgctgccgtt ccacaggttc
      421 agggtcgtac tgtttcgaaa catgttgagc acttgttgat gcgcgcgctc cgcttctccc
      481 aaccgagccc aaagacatgc ataccagccg cagggccacg ctgcgactcc ggacccgtgg
      541 cgaatcctgt cctcgagtga gaccgaagcc gcctgcgcaa agccacccgg cgaacgaggc
      601 gtgatctgtc ttcccggata cacgggaaaa agctgtgaaa catgcccaat gcccggatcg
      661 gatgttacga agtcctccga ccattcctga agctgacctg cttttcccac ttgatacggg
      721 agcagacgtc cccgggcagc cattaagcgt gagcgaaaac tctcgtcgat attcaaaatc
      781 ttcgctgcct caatgcagtt cgtaaaaagg tcccagatga tggccatgtc catcgtcgac
      841 gcaacgctta ctccgcaacg tctgccctcg acgatgaagt gagtctcggg agagacggag
      901 ggagctgtca cgagccggcc ctggtgatcc gggaccagcc aacctagcat gaactccgcg
      961 gccgccttca tcaccggata agcgcgccgt tcaagaaact gagtgtcgag gccgtagacg
     1021 tagtgttccc acaggtgccg gcagagccag gctccgccca tgggccaatt cgcccacacg
     1081 gggtcgccgg tctgatttcc gacaggagcg gcctctgccc ataaatccgc attgtgatgc
     1141 gccgtccatc cgtccagccc gtaatacacc cgggcggtct ctcttcctgt cacgctgaga
     1201 tgatcggtga gatcgaaaag gggtttgtgc agttcgctga gatttcccac ctctgcaagc
     1261 cagtaattca tttgcgcgtt gatgttcaac gtccaattcg aactccacgg tggccgcact
     1321 ttgttgttcc agataccttg cagattcgca ggctgcgttc ctggcctaga gctggcaatc
     1381 atcagatagc gagcgaactg gaagtaaagc gcggcaaact gtggctcgtc tctcgttgca
     1441 agttgacgga gcctttctcc tgtcgaggtc cggggcgtga ttgcctctcc gagagagaga
     1501 gagactctcc ggaagagtga ctggtgatcc tgaatatgtt ccgcccggag ctgaggatag
     1561 gaactcttcg acgccttgtt gacatataga gtgttgctat ctgctatttc ttcggggctc
     1621 ccgtcaggaa tcgctccgaa ttgcttgtag ccggttgcag cggaaatcaa cagtgtggcg
     1681 gaagtcgcac ctctaattac catgctgcct tccgggaatg acaaatttcc ctggtccgga
     1741 agcccccgaa ctcgcacctc gaaatacatc cctttcccaa gcgcatcgtc gtagatgacc
     1801 ggatcaaggg acttggtcag atagtttggg tcgacgtgcc taggagcctt cccccgcagc
     1861 acgaaatcgt ctccttctga gccggcaaag ttcgtgcgaa gtaggctgct gagagacgcc
     1921 gtgcaggata agcgcctggg ttgatcgcac gtcagccgca ggacgactag ctgtgccggg
     1981 aagctgcaga agatttcgcg gatgtagcgt gcaccatcgg ccgtgtagga gacggtgaga
     2041 atcccggtgt cgagatcaag ctcacgacgg tattgcgaga aattgccggt cggcggaaac
     2101 gagatgttca ggtcgcacaa cggcagatac gattggttgt aaggaccctg cataagtcgc
     2161 gtcacgcggt ctgctgccgc gtaatcgcgg tcatccataa gcaggcggcg cacctctgcc
     2221 aggtggtcat aagcgtgcgg attgttccat tgctcgtcgg aggggccgct ccaaagcgta
     2281 tcttcattca gatgaatcag ctctctatcg acgccgccga aaacggtggc gcccaaacgc
     2341 ccgttcccaa taggtagcga ttccatccaa tgctttgccg gactgcggta ccacagcaat
     2401 gccgaattgc cctcgtcgtg ctccggcagc ccaggattca aagcggaagt cgccgtaatc
     2461 gccgctgctc ctttcagaaa ctcgcgcctg ctggcatcca tcacgtatgt ctctcccgcg
     2521 agacaagctt aaagctcacc tgaaagcatc tgcctctatg tggctgtacg gccatcgggc
     2581 gatggccgta cagcccatga ttggcagttc tagaaccgca ctttcgcacc cacacggaag
     2641 tagcgttggt ccgtcaagc
//
LOCUS       DATAVD010001328         4450 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3476900, whole genome shotgun sequence.
ACCESSION   DATAVD010001328 DATAVD010000000
VERSION     DATAVD010001328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4450
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3476900"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1174)
                     /locus_tag="VHX39_25370"
     CDS             complement(<1..1174)
                     /locus_tag="VHX39_25370"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX3994518.1"
                     /translation="MHTFMGRRSALGLLTAAATARTAIAAEESPITIGFAEALTGSLA
                     AVGKSGVLAMQIWAEDINAKGGLLGRPVKLVFYDNQSTSTNVPGLYEKLLDVDHVDLV
                     LSGYATNMAAPAMPVVIAHNKLYLSIFSLAINAEFHYPRCFAMIATGPQPKIAFSQGF
                     FEIVAAMNPKPKTLAIVGADAEFARNATDGARQNATAAGLQIVYDKAYPATTSDYAPI
                     LRAVRATNPEVVFVASYPADTAGIMRAAGEMGFTARLFGGSLVGLQTAALKQQLGPLL
                     NGVVIGEQWVPAPALQYPGVMEFIKTYRSRAAAAGIDPLGVFLPPFAYARMQVLEQAV
                     TGAKTLDDDKLADYLRTHTFKTVVGDITFGKDGEWAAPRLVWTQFRGIKGNDLSQFE"
     gene            complement(1738..3405)
                     /locus_tag="VHX39_25375"
     CDS             complement(1738..3405)
                     /locus_tag="VHX39_25375"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HEX3994519.1"
                     /translation="MITFESISAATPDKAGLTAEYAALDRMLDAGDLTGALHTWDTTR
                     RSFETWSALVHLKFSQDTTNVAAKAAREYADGLAPEAADLETSFKRRLLALPDRSGLA
                     GAAGAHAVRLWETDVTAFDPAIKPDLEEESRLTARYTEILASAALSIGGKTVNLAGIA
                     PYAEDPDRAVRHEAESLRWSFFAQHGTELDQIYDDLVRLRHGMARKLGFPDYTPLGYR
                     RMRRVDYGPQDVARYREQVVTHVVPLVARLLEQRRVAFGWDRLRYWDEAMVDPAGNPK
                     PAGGHDFLVAQARTMFDGMDSRMGEFYREMEAGGFLDLRNRPGKSGGGFCTSFPTVGM
                     PFIFANFNGTAHDIGVFTHEMGHAFQNHRSRGQPNVDYLWPTMEAAEIHSMSLEFLTW
                     PFMNLLVGDAAADRFRRMHLIGALAFLPYGVCVDHFQHEIYAKPGASPEERHAIWRQL
                     EKHYMPWTDFGDLAYPAKGGRWQAKQHIYNSPFYYIDYTLAQCCAMQFWSRARHDAKG
                     ALDAYVGLCDLGGSAPFQELVRDAGLISPFADGALADVVREAEAFLV"
     gene            complement(3402..>4450)
                     /locus_tag="VHX39_25380"
     CDS             complement(3402..>4450)
                     /locus_tag="VHX39_25380"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3994520.1"
                     /translation="YSLVRVRENVEGIALYGGEPEETTNLLHRFMAVYGNFRGIMNRT
                     FLLNLVTGGYDQAALIFPFVIVAPGYFAGRFAQGVIFQTVDAFSQIQSALSWIIDRYD
                     VIASYRAIVERLATFHRSIEEARVVNANLIRTESADNTLRLRGMDLALPNGMKLLEHT
                     DLTIPEGHSTVITGRSGSGKSTLFRALSGIWPFARGEIQLPKNSFFLPQRPYIPLGTL
                     RHVITYPIDGTHHDRNELAQLLRDVGLPHLVDRIDRDDNWPQSLSAGELQRIAVARAL
                     LAKPSWIFLDEATANLDPESEAEIYHVLRAHLPNATLVAIAHGPSVADFHEGRIVFER
                     SGTAPGTLTMEAAA"
BASE COUNT          889 a         1379 c         1337 g          845 t
ORIGIN      
        1 tctcgaactg cgacagatcg ttgcccttga tgccgcggaa ctgggtccag acgaggcgcg
       61 gcgcagccca ctcaccatcc ttgccaaagg tgatgtcgcc gaccacggtc ttgaacgtgt
      121 gagtccgcag gtaatcggcc agcttgtcat catcgagtgt cttcgcgccg gtcacggcct
      181 gctccaacac ctgcatcctt gcgtatgcaa aaggtggaag aaaaacgccc agtggatcga
      241 tgccggcggc ggcggcacgc gaacgatagg ttttgatgaa ttccatgacg cctgggtatt
      301 gcagcgccgg ggccggcacc cattgctcgc cgatcacgac accattcagc agcggcccga
      361 gttgttgttt cagcgccgct gtctggaggc ccacgaggct gccgccaaac agacgcgcgg
      421 tgaagcccat ttcgccggcg gctcgcatga tgcccgcggt gtcggcggga taggatgcga
      481 cgaaaaccac ctcggggttg gtggcgcgga cggctcgcag gatcggtgca taatcgctgg
      541 tcgtggccgg ataggcttta tcatagacga tttgcaggcc ggcagcggtg gcattctggc
      601 gggcgccgtc ggtcgcattg cgggcgaact cggcatccgc gccgacgatc gccagcgttt
      661 tgggcttcgg gttcatcgcc gcgacgatct cgaagaaccc ttgcgagaag gcaatcttcg
      721 gctgaggtcc ggtggcgatc atggcgaagc agcgcgggta gtggaattcg gcgttgatgg
      781 cgagggaaaa aatgctcagg taaagtttgt tgtgggcgat gaccacgggc atggccggtg
      841 ccgccatgtt ggtggcatag cctgacagga ccagatcgac gtggtcgacg tcgagcagct
      901 tctcatacag tccgggaacg ttggtcgatg tgctctggtt gtcgtagaag accagcttga
      961 ccggacggcc cagaagtccg cctttggcat tgatgtcctc agcccaaatt tgcatggcga
     1021 gcacgccgga tttgcccact gcggcaagac tgccggtcaa tgcctcggcg aatccgatgg
     1081 tgattggcga ttcttccgca gcgattgcgg ttcgcgccgt cgcagcggca gtcagcaggc
     1141 ccaacgccga acggcggccc ataaacgtat gcatgtcgtt ccctccctgc ccgtcacttt
     1201 gcgggcgtgg gctatgacgt tagcagaccg gcggccggcg gctatagccg gcgcgttcga
     1261 acagaagttc tgattatggt agccgcgacc cgcccagatg gttggtttcg gccagcagga
     1321 tgggtccggc aggggcgccg caaccgtaga atgaactccg tcgctctgaa cctcatcttc
     1381 cgctttcatg aatccttgct gccgcctggg cgctgattgg ctctggcggt gtcgcgttga
     1441 ttgcaacgtt ccgatcgttt atcggcgccg taagaattta tttgagaggt gcagagcaac
     1501 agagaagatc attcggaatg cttatcagtg ggctcgtttc agtcatgcga gctgcttttg
     1561 gcaatgctgc cgggccagat acgactacgt tccgcgcgga cgcccctgct accggttcgc
     1621 cagccgtgct caactcaacg ccgtaccaag cactgcaagg gccgggcgcg acagtaatcg
     1681 ccgaatgtgc gcggagcgcc gccggtgatc cgtccgacca accgtgcggt tgagacctca
     1741 aaccagaaac gcctccgcct cccgcaccac atcggccagc gcgccatccg cgaacggcga
     1801 gatcaacccg gcatcgcgca ccagttcctg aaacggcgcc gagccgccca gatcgcacaa
     1861 tcccacataa gcatccagcg cgcctttggc atcgtgccgc gcgcgcgacc agaattgcat
     1921 cgcgcaacat tgcgccaacg tatagtcaat ataatagaat ggtgaattgt agatgtgctg
     1981 cttggcctgc caacgcccgc ctttcgcggg ataggccaga tcgccgaaat ccgtccacgg
     2041 catgtaatgt ttttccagtt gccgccagat cgcatggcgt tcctcgggcg acgcgccggg
     2101 tttcgcgtaa atctcatgct ggaagtgatc gacgcagacg ccataaggca aaaatgccaa
     2161 tgccccgatc aggtgcatgc gccggaaacg gtccgccgcg gcatcgccaa ccagcaaatt
     2221 catgaacggc cacgtcagaa attccaaact catcgagtgg atttcggcag cctccatcgt
     2281 cggccacaaa tagtcgacat tcggctgacc gcgcgagcgg tggttctgga acgcatgacc
     2341 catctcgtgg gtaaatacgc cgatgtcatg cgcggtgccg ttaaagttgg cgaaaatgaa
     2401 cggcatgccg acagttggga acgacgtgca aaacccgcct cccgacttgc cgggccggtt
     2461 gcgcagatcg aggaaacccc ccgcctccat ctcccgataa aactccccca ttcgcgaatc
     2521 catcccatcg aacatcgttc gagcctgggc cacgagaaaa tcatgccctc cggccggttt
     2581 gggattgccg gcgggatcga ccatggcctc atcccagtaa cgcaaccggt cccaaccaaa
     2641 tgcgacgcgg cgctgctcca acaaacgggc gaccagcggc accacgtggg tcacaacctg
     2701 ctcgcgataa cgcgccacgt cctgcggtcc gtaatccacc cggcgcatcc gccgataacc
     2761 cagcggcgtg taatccggga aaccgagctt gcgggccatt ccgtgtcgta accgaaccag
     2821 gtcgtcgtaa atttgatcca gttccgtacc gtgttgggca aagaacgacc agcgcagcga
     2881 ttccgcttca tggcgtacgg cacgatccgg atcctcggcg tacggcgcaa tcccggccag
     2941 attgaccgtc ttccctccga tcgacaaagc cgccgaggca aggatttccg tgtaccgcgc
     3001 ggtcagccgg gattcttctt ccagatccgg cttgatggcc ggatcgaacg ccgtgacgtc
     3061 ggtctcccac agccgcaccg catgcgcgcc agccgctccc gccaggccgg atcgatccgg
     3121 caacgcaagc aaccggcgct tgaacgaggt ttccagatcg gccgcctcag gcgccaaccc
     3181 gtcggcgtat tcgcgggccg ccttggctgc gacatttgtg gtatcctggg aaaacttcag
     3241 atggaccaat gcgctccagg tctcgaacga acgccgcgtg gtatcccagg tgtgcagtgc
     3301 gccggtcaga tctccggcgt ccagcatccg gtccagcgcg gcatactcgg cggtcaggcc
     3361 cgccttgtcc ggcgttgcgg ccgagatcga ttcgaacgtg atcatgccgc cgcctccatg
     3421 gtcaatgttc ccggcgccgt gccggaccgt tcgaacacga tgcgtccttc atggaagtcg
     3481 gcgaccgacg gaccatgcgc aatcgcaacc aatgtcgcgt tgggcaaatg cgctcttagc
     3541 acgtggtaaa tctccgcctc ggattccggg tcgaggttcg cggttgcttc atccaggaag
     3601 atccaggacg gtttggccag cagcgctcga gcgaccgcga tccgttgcag ttcgccggcc
     3661 gacaggctct gcggccagtt atcgtcccgg tcgatgcggt cgaccagatg cggcagcccc
     3721 acgtcgcgca gcaactgcgc aagttcgttc cggtcgtggt gcgtgccatc gatcggatag
     3781 gtgatcacgt ggcgtaacgt ccccagcgga atgtaaggcc gttgcggcag gaagaacgag
     3841 ttctttggca actggatttc accgcgcgcg aacggccaga tgcctgacaa agcgcggaac
     3901 aaggtggact tgcccgatcc ggaccgcccg gtgatgaccg tcgaatgccc ttcggggatg
     3961 gtgagatcgg tatgctccaa caacttcatt ccattcggca acgccaggtc catacctcgc
     4021 aagcgcaacg tgttgtcggc gctttcggtg cggatcaggt tggcattgac cacccgcgcc
     4081 tcctcgatcg aacgatggaa cgtggcaagc cgttcaacga tcgcccggta cgatgcgata
     4141 acgtcgtagc ggtcgatgat ccaggacaag gcgctttgaa tctgggagaa tgcgtcgacc
     4201 gtttgaaaga tcacgccctg cgcaaatctg ccggcaaaat agccaggtgc aacaatgaca
     4261 aaaggaaaaa tcagcgcggc ctggtcgtac cctccggtaa ccaggttcaa caaaaaggtt
     4321 cggttcatga tgccgcggaa attcccgtac accgccatga agcggtgcag caggttggtg
     4381 gtctcctcag gctcgccgcc gtacagcgca atgccttcga cgttttccct gaccctgacc
     4441 agggaatagc
//
LOCUS       DATAVD010001329        10823 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1427151, whole genome shotgun sequence.
ACCESSION   DATAVD010001329 DATAVD010000000
VERSION     DATAVD010001329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10823
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1427151"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..233
                     /locus_tag="VHX39_25385"
     CDS             <1..233
                     /locus_tag="VHX39_25385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994521.1"
                     /translation="QIAQLYPELLKNNSGANSKALLALFCNPFLWASLAVYINVTYRS
                     KMKAKRLLREAGYFWEREQSSRAGRNLSAEKA"
     gene            complement(324..1430)
                     /locus_tag="VHX39_25390"
     CDS             complement(324..1430)
                     /locus_tag="VHX39_25390"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX3994522.1"
                     /translation="MTKVIVVGAGVLGSSAAYRLAQGGADVTVLEATRIGGGTSGISY
                     AWTNAHRKPPKPYHDLNVAGMKAHAALRDEFGATPWWHGGGSLEWEPESGRVSQRENV
                     EQLQAWGYAAEWIDRKQVLELEPDIDPAVIGDAPIAWFPEEGWLDPVVYAHAMLSAAR
                     RRYGAKVLCGVRVADLIMRGDRVSGVRTADGTQHDADMVVNCAGRWTNEVVREAGLHL
                     PLAPSVGFLVFTPPVATSLSRVVHTSVINARPDGAGRLMLHWNPTDAGLRFDIALSPS
                     MPEARDLVRRARTLLPSIGDAEPEAVRIAIRPIPGDHLSAVGPVPRISGYYLAVTHSG
                     VTMSPFLGAAIADEIVRGRQREELADFRPARFFN"
     gene            complement(1511..3151)
                     /locus_tag="VHX39_25395"
     CDS             complement(1511..3151)
                     /locus_tag="VHX39_25395"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3994523.1"
                     /translation="MPDTQILDRRPDQDQVSQYDAIVIGAGISGMFMLYRLRQLGMTA
                     RVFEAGTDVGGTWYWNRYPGARFDSESWTYGYSFSRELLQEWDWKEHFSPQPDTLEYL
                     KLVTDKFDLRRDMQFRSTVTAAQWDEAANLWTVTLESGQQARSRFLITAIGILSAYTL
                     PAIPGRDSFRGPAYHPARWPHTPVDFTGKRVGVIGTGATAIQAIPEIAKHAQSLTVFQ
                     RRPNWAAPLHNAKITQQEMAAIKTRYDEIYARCAETPSWFIHEADRRKTMDVTPAERE
                     AFWEKLYAEPGFGIWMGNFRDILVDETANAAISEFIAKKIRQRVQDPKVADKLIPKDH
                     GFGTRRVPLESGYFETYNRDNVSLVDINETPIERITPSGVQTSDREYEFDILIYATGF
                     DGVTGAFDRIDIRGPNGARLKDVWVDGPRTWLGMQPDGFPNLLMVLGPHTARGNITRA
                     IEYGVEFLTGLLRFMQAHGHTRVETRPEQVANWTETVIKAAEPLLSSKVDSWQTGVNR
                     NVAGRSVRRVLGYNGNGVHYRRKCEEVAAGGYQEFAFR"
     gene            complement(3166..4056)
                     /locus_tag="VHX39_25400"
     CDS             complement(3166..4056)
                     /locus_tag="VHX39_25400"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3994524.1"
                     /translation="MTLSIRPIDPVSRPFFGGVASGIDITQPLTREQAAEIEKGMDQF
                     GVMVFHGQRLTDETQMAFSRNFGELELASHNLRESKEQRLGAHINDISNLDANNNVLA
                     RDNRRRLFSLGTRLWHSDSSFKVVPAKYSLLSARLIPSEGGNTEFADMRAAYDALDDE
                     TKAECEGLVCEHSQLFSRAQIGFGDFTEQEREQFAPVHQRLIRRHPSTGRKSLYLASH
                     AGTIVGWPVPEARAFLRDLIEHATQRKFVYSHEWAQFDLVVWDNQATMHRARPFDATQ
                     PRDMHRTTVAGTTSTMAQAA"
     gene            complement(4121..4789)
                     /locus_tag="VHX39_25405"
     CDS             complement(4121..4789)
                     /locus_tag="VHX39_25405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007397793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HEX3994525.1"
                     /translation="MEHSNLTARELFEALKSGPPRKQFGFGKRPALVNVDVQHAYTRP
                     DEFPTAYETDPRQIEYIDRLAKLMRERDLPVVWTYVAYSDSGDDCGIWGTRSDGPDAL
                     QNIKVGSRRSQLDDRLTIDAKRDTIINKRMASAFHETRLPSLLNFHRIDTLIVTGGST
                     SGCVRATVVDSLSHGFRTIVPEECTADRHESPHFANLYDMQMKYADVVPVQSAFAWLQ
                     AWQP"
     gene            5006..6577
                     /locus_tag="VHX39_25410"
     CDS             5006..6577
                     /locus_tag="VHX39_25410"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3994526.1"
                     /translation="MASTTLLLAIALLLAASSARAEEQVLQVSLNTELQILDPIYSTV
                     NATRVFAYMVFDTLVSIDNEGRYHPQMLEGWTISEDRLTYTFRLRDGLLWSDGTEVTA
                     DDCVASIRRWARREAFGAQLIAATLAFRVIDKQTFELQLNRPFAFVIEALGKPGNVIP
                     VMMPARLAGLDISKPVPEVVGSGPFLFRRDEWRPNDRAIFVRNPNYHPRPEPPDGLSG
                     GKVVHLDRVDLVSMPDQATRVAALRKGEVDMLEVVPFDSIAILRRDPNIAITSQHGIE
                     QMLTVLALNHLQPPFNNVLMRRALQAAITQDEVMAGMGLPDDMYLSRCLSIYMCDSPN
                     TTDAGSDVYRSAGIEQATKLLQQAGYHNEPVVFLHASTSALLDPVGLITSDQMRRAGF
                     NVDVHTSDFTTIDQRRRSRAPVEQGGWSVVPIVWNGIDLVNPLSDPAVSYNCSETNPG
                     WYCDAKMTELLRRYSASFDATERKDLAAQIQAEFHDNVNYVIAGQFSAPRAYRADLHG
                     VIPFAFPVFWNIERK"
     gene            complement(7003..8019)
                     /locus_tag="VHX39_25415"
     CDS             complement(7003..8019)
                     /locus_tag="VHX39_25415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2891 domain-containing protein"
                     /protein_id="HEX3994527.1"
                     /translation="MGLDPTLTSQFARAALGHVTREYPVKLDHVMAGPEDLVAPRALH
                     PIFFGSFDWHSCVHAYWLLARLLRVCPDLPEADRIREHFAKSLIRNNVAVELAYLSRP
                     FTRTFERPYGWAWLLKLAAELHAHPDDEAARCSAALQPLAEAFARRFRDFLPNARYPI
                     RTGAHSSTAFALTLAMDYAQEWNDVELAEALTRAAHDWYLDDADCQAWEPSGEDFLSP
                     CLIEAECMRRMLPPGEFAAWFTRFLPHLGQREPRTLFQPVVASDRTDGKIAHLDGLNL
                     SRAWCWSRLAGAMPDADPRAAVILSAAAEHRDASLSHIAEDYMGEHWLATFALMALEA
                     AEVG"
     gene            complement(8026..8784)
                     /locus_tag="VHX39_25420"
     CDS             complement(8026..8784)
                     /locus_tag="VHX39_25420"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3994528.1"
                     /translation="MPTVGKIAVITGAGSGIGRASALTLFADGFSVVLAGRRRAMLEE
                     TASLAKATPPQMLIVPTDVSDPASIAALFDTVRATYGRIDLLFNNAGISTRNIPIEDL
                     TLEQWSNVVAVNLTGSFLCAQHAFRMMKEQQPRGGRIINNGSVSAHVPRRNSVPYAST
                     KHALTGLTRALSLDGREYDIACGQIDIGNAATTRNEDTARGRLQASGKIEAEARIDVN
                     DVARGVAYMASLSLDANVQFMTVMATKMPYIGRG"
     gene            complement(8804..9535)
                     /locus_tag="VHX39_25425"
     CDS             complement(8804..9535)
                     /locus_tag="VHX39_25425"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX3994529.1"
                     /translation="MGRLNGKIILISGGARGQGAAEARLFVAEGAHVVIGDVLEAEGR
                     QLADELGPAARFVVQDVTREADWEQAIEVAAQLGGLHGLVNNAGIYQPKTLMETDAAL
                     FERHMRINQLGCFLGMKAVVPLMERSGGGSIVNISSVAGLRGSPGAIAYSATKWALRG
                     MTKAAAVDLAPRKIRVNSIHPGPIDTEMLNVRTPEQNQRRLQLVPMRRMGTSEEVASL
                     VLFLLSDESGYITGAEVAIDGGATL"
     gene            9699..>10823
                     /locus_tag="VHX39_25430"
     CDS             9699..>10823
                     /locus_tag="VHX39_25430"
                     /inference="COORDINATES: protein motif:HMM:NF013761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HEX3994530.1"
                     /translation="MNDPAAADRSELRAQYRPPETTVLGALLDAATVPPPLAARVAVR
                     ARALVRAARATHTPGADVSDFLREYGLGTREGVALLCLAEALLRIPDAATADAFIEDR
                     ITGVDWQSHLGRADSLTVNASSWAFMLTGRVLALDTDRQAGVQGAIQRMVRRIGEPLI
                     QAALRQGMRVLARQFVMGRTIEEALTRAAASTSQRWRYSFDMLGEAARTRDDAARYMR
                     AYQDAIGAVGRAGGGPVNGPGISVKLSALHPRYEPLQAANCVPLLIAGLTTLARAAKQ
                     ADIGLTVDAEEADRLEISLDIFAAVLADPGLRGWDGLGLAVQAYQKRARPLIDWIADL
                     AGKTAHRVPVRLVKGAYWDTEIKQAQLMGYEGYPVFTRKSA"
BASE COUNT         2054 a         3341 c         3327 g         2101 t
ORIGIN      
        1 gtcaaattgc tcaactttat cccgagctgc tcaaaaacaa ctcgggagca aacagcaagg
       61 cgctcctggc gctgttctgc aatccatttc tatgggcaag tctcgccgta tatatcaacg
      121 tgacgtatcg atccaagatg aaggcaaagc gtctcctgag ggaggccgga tacttctggg
      181 agcgcgagca atcatcccgg gcggggcgga acctatcggc cgaaaaggcg tagttgctcg
      241 acatccggca cgcaccggct gaccgtcacc tcgctgttcg atcgggaggc attcagccgg
      301 tggcagacgg ctttcggggg atctcaattg aagaaccgtg ccggacggaa atcggcaagt
      361 tcttcacgtt gccgcccacg cacaatctcg tccgcgatcg cggcacccag gaacggcgac
      421 atcgttacgc cgctgtgggt gaccgcgaga taataaccgg agatccgcgg gacgggtccg
      481 accgcggaca gatgatcgcc ggggatcggc cggatggcga tgcgcaccgc ctccggctcc
      541 gcatcgccga tcgagggcaa caacgtgcgt gcccgccgga ccaaatcgcg ggcctccggc
      601 atcgacggac taagggcgat atcgaaacgt aagcccgcgt cggttgggtt ccagtgcagc
      661 atcaggcggc cggcgccatc cggccgagcg ttgataacac tggtgtgcac gacacggctc
      721 aggctggtgg ccaccggcgg agtaaacacc agaaaaccga cgctcggcgc gagcggcaga
      781 tgcaagccgg cctcgcgaac gacttcgttg gtccagcggc cggcgcagtt aaccaccatg
      841 tcggcgtcgt gctgcgtgcc gtcggcggtc cgaacgccgc tgaccctgtc gcctcgcatg
      901 atcagatcgg ccacgcgcac accacacagc accttggcgc cataacggcg ccgcgcggcg
      961 gacagcatgg cgtgtgcgta aaccacggga tccagccaac cttcttctgg aaaccaggcg
     1021 attggggcgt cgccgatcac ggcaggatcg atgtcgggtt caagttcaag aacctgtttg
     1081 cgatcgatcc attcggcggc gtaaccccac gcctgcagtt gctcgacatt ctcgcgttga
     1141 gagacgcggc cggactcggg ttcccattcc aggctgccgc cgccatgcca ccagggcgtg
     1201 gcgccaaact cgtcgcgcag cgcggcgtgc gctttcattc cggcgacgtt aaggtcgtgg
     1261 tagggcttcg gaggctttcg gtgcgcattt gtccaggcat aactgatgcc ggatgtgcct
     1321 ccgccgatcc gagtcgcctc cagcaccgtt acatccgcgc caccctgggc caaccgatag
     1381 gcagccgaag agcccagtac gcccgctccg acgacgatca ccttggtcat gctctgtctc
     1441 ctgtcgtaac aaagccatcc gctcagatcg atgcatcgca gcgataacga ccaggctttg
     1501 tctggtggtg tcagcggaac gcgaattcct ggtaaccgcc agcggcaact tcctcgcact
     1561 tgcggcggta atgcacaccg ttgccgttat agccaagcac ccgccgaacg ctgcgtccgg
     1621 ctacgttgcg gttcactccg gtttgccacg aatcgacctt gctggagagc agcggttcgg
     1681 ccgccttgat caccgtttcg gtccagtttg cgacctgctc gggccgggtt tccacgcgtg
     1741 tgtggccatg tgcctgcata aaacgtagca ggccggtgag gaattccacg ccgtattcga
     1801 tggcacgggt gatgttgccg cgcgcggtat gcggcccaag taccatcagc aggttcggaa
     1861 aaccgtccgg ctgcatgcca agccaggtgc gcgggccatc cacccatacg tctttgaggc
     1921 gcgccccatt gggacctctt atgtcgatgc ggtcgaacgc accagtgacg ccgtcgaagc
     1981 cggtggcata gatcaaaatg tcgaattcgt attctctgtc gctggtctgg acgccgctcg
     2041 gcgtaatgcg ttcgatcggg gtttcgttaa tgtcgaccaa cgatacgttg tcgcggttat
     2101 aggtctcgaa ataaccgctc tccagcggca cccggcgtgt gccgaagcca tggtccttcg
     2161 ggatcagttt gtccgcaact tttggatcct gcacgcgctg acgaatcttt ttggcaatga
     2221 attcgctgat cgctgcgttg gcggtttcgt ccaccaggat atctcgaaaa ttgcccatcc
     2281 agatgccgaa gcccggctcg gcgtagagct tttcccagaa cgcctcacgt tccgcaggcg
     2341 tcacatccat ggttttgcgg cggtcggctt catggatgaa ccaactggga gtttcggcgc
     2401 agcgagcata gatctcatcg tagcgggttt tgattgccgc catctcctgc tgagtgattt
     2461 tggcgttgtg cagcggcgca gcccagttgg ggcgacgttg aaagacggtg agggattggg
     2521 cgtgtttggc gatttccggg attgcctgga tggcggtcgc cccggtaccg atgacgccga
     2581 cgcgtttgcc ggtgaaatca accggggtgt gcggccagcg cgccggatga tacgccggtc
     2641 cccggaaact gtcgcgtccc ggaatggcgg gcagcgtgta agccgacaga atgccgatcg
     2701 ccgtgatcag aaaccgcgat cgcgcctgct gtccgctctc cagcgtaacg gtccacaggt
     2761 tcgccgcttc gtcccattgc gcggccgtga cggtgctgcg gaattgcatg tcgcgccgca
     2821 gatcgaattt gtcggtgaca agcttcagat attcaagcgt atccggctgc ggcgagaaat
     2881 gttccttcca gtcccactcc tgcagcaatt cccgggagaa cgaatagccg taggtccagc
     2941 tttcggaatc gaaacgggcg ccgggatagc ggttccagta ccaggtcccg ccgacatccg
     3001 tgccggcctc gaaaacacgc gcggtcatgc ccaattgacg caggcgatac agcatgaaca
     3061 tgccggatat gccggcgccg atcacgatcg cgtcatactg cgagacctga tcctggtctg
     3121 gccgacggtc caggatctgg gtgtccggca tgatgtctgt ccccctcagg ccgcttgcgc
     3181 catggtcgag gtggtgccgg cgaccgtggt gcggtgcata tcgcgcggct gtgtcgcatc
     3241 gaacggccgg gcccggtgca tggtcgcctg attgtcccaa acgaccagat cgaattgcgc
     3301 ccattcgtgc gaatagacga acttccgctg cgtcgcgtgc tcgatcagat cgcgtaggaa
     3361 agcgcgtgcc tccggcaccg gccaaccgac gatcgttccg gcgtgtgatg ccagatacag
     3421 cgacttccga ccggtcgagg gatgccgccg gatcagccgt tggtgcaccg gcgcgaactg
     3481 ctcccgctct tgctcggtga agtcgccgaa gccgatctgg gcgcgcgaga acaactggct
     3541 gtgctcgcac acgaggcctt cgcactcagc tttggtttcg tcgtcgagtg cgtcataggc
     3601 ggcgcgcatg tcggcgaatt cggtattgcc gccctctgag ggaatgagcc gggccgacag
     3661 caacgaatat ttggcgggca caaccttgaa tgagctgtcg gaatgccaca gccgcgtgcc
     3721 cagactgaac agccgccggc ggttgtctcg tgccagcacg ttgttgttgg cgtccaggtt
     3781 ggaaatgtcg ttgatgtggg cgcccagacg ctgttccttg gattcacgca ggttgtggct
     3841 ggcaagttcc agctcgccaa aattgcgtga gaacgccatc tgagtttcgt cggtgaggcg
     3901 ctggccatgg aacaccatga cgccgaattg gtccatgccc ttttcgattt cggccgcctg
     3961 ttcccgggtc agcggttgcg taatgtcgat ccccgaggcg acgccgccaa aaaacgggcg
     4021 agacacggga tcgatcgggc ggatggatag cgtcatggca gaactccctt aacggctcca
     4081 gcgtgtgaag ccaggcgccg tctgtcaaca tcgcgcgggc ttagggctgc catgcctgaa
     4141 gccaggcgaa cgccgactgc accggcacga cgtcggcgta tttcatctgc atatcgtaca
     4201 ggttggcgaa atgcgggctc tcgtgccggt cggcggtgca ttcctccggc acgatggtgc
     4261 ggaaaccgtg cgacagactg tccacgaccg tggcacgcac gcagcccgag gtcgaaccac
     4321 cggtcacgat cagtgtatcg atacgatgga agttcagcag cgacggcaga cgcgtttcat
     4381 ggaacgccga ggccatgcgt ttgttaatga tagtgtcgcg tttcgcatcg atggtgagcc
     4441 ggtcatccag ttgcgaacgg cgtgagccca ccttgatatt ctgcaacgcg tcgggaccat
     4501 ccgaacgcgt gccccagatg ccgcaatcgt cgccggagtc ggaataggcg acataggtcc
     4561 agaccaccgg cagatcgcgc tcgcgcatca gtttggccaa ccggtcgatg tattcgatct
     4621 gccgagggtc ggtctcatag gcggtgggaa actcgtccgg acgggtgtag gcgtgctgca
     4681 cgtcgacatt caccaacgcc ggacgtttgc cgaagccgaa ttgcttgcgt ggcgggccgg
     4741 atttcaacgc ttcgaacaat tcgcgggcgg tgaggttgga gtgttccacg tcgatcatcc
     4801 tccggaaaat gcaaacgtca cggcattgac ccgatatgct gcgtgccgga tagtgccggc
     4861 aataacagct cggaggaagc ggtaacgcgc ggtcctcggg gcgcatggtc acggttccgc
     4921 atgaacgaaa gtttgcgcaa ccatggcccg tgcgagaatt gtgtcttcgt ttgcacccac
     4981 gcaatccttc cgggctgcat gccgcgtggc atcgaccacg ttgctgctgg cgattgcgct
     5041 gttgctcgca gcgtcgagtg cgagagccga agaacaggtc ctccaggtct cgctgaacac
     5101 cgagctacaa atcctcgatc cgatttattc gaccgtcaac gcgacgcggg tgtttgcgta
     5161 tatggtgttc gatacgctgg tctcgatcga caacgagggc cggtatcacc cgcaaatgct
     5221 cgaagggtgg acgatcagcg aggatcggct gacctatacg ttccgtttgc gggacggcct
     5281 gctatggagt gacggaactg aggtcactgc tgacgattgc gttgcctcga tccgccggtg
     5341 ggccaggcgg gaggcgttcg gcgcgcaatt gatcgcggcg acgctggcgt tccgggtcat
     5401 cgacaaacaa acgttcgaac tgcaactcaa ccggcccttt gccttcgtca ttgaggcctt
     5461 gggtaaaccc ggtaatgtta ttccggtgat gatgccggcg cggctcgccg gcctcgatat
     5521 cagcaaaccg gtgccggaag tggtggggtc gggtccgttc ctgttccgcc gtgacgaatg
     5581 gcgtcctaac gatcgcgcaa tcttcgtgcg caacccgaat tatcatcctc gcccagaacc
     5641 gccggatggg ttgtcgggag gcaaggtggt ccacctcgac cgcgtcgatc tcgtcagcat
     5701 gccggatcag gcgacgcgtg tcgcggcgct gcgcaaaggc gaggtcgata tgctcgaggt
     5761 cgtgccgttc gattccatcg ccatcctgcg ccgcgatccc aatatcgcca tcacctcgca
     5821 gcacggcatc gaacagatgc tgacggtgct ggcactgaac cacctgcagc cgccattcaa
     5881 caatgtgctg atgcggcgcg ccttgcaggc agccatcacg caggacgagg tcatggcggg
     5941 catggggctg ccggatgata tgtacttatc gcgctgcctg tcgatctaca tgtgcgactc
     6001 acccaatacc accgatgccg gctcggatgt gtatcgatcg gccggcatcg agcaggcgac
     6061 gaagctgctc caacaggctg gctatcacaa tgaaccggtg gtgtttctgc acgccagcac
     6121 gtcggctttg ctggatccgg tgggtctgat tacctccgac caaatgcggc gcgcgggctt
     6181 caacgtcgat gtccacacct cggatttcac gacgatcgat cagcggcggc gcagccgggc
     6241 gccggtcgag caaggcggtt ggagcgtggt gccgatcgtc tggaacggga tcgacctggt
     6301 gaacccactg tcggatcccg ccgtgtcgta caattgttcc gaaaccaatc caggttggta
     6361 ctgcgatgcc aaaatgaccg agttgttgcg ccgttattcg gccagcttcg acgccaccga
     6421 acgcaaggat ctcgccgcgc aaatccaggc ggagtttcac gacaatgtca attacgtgat
     6481 tgccggtcag ttctctgcgc cgcgggctta tcgtgctgac ctgcacggcg ttattccgtt
     6541 tgcttttccc gtgttctgga acattgaacg gaagtagagg tggccagctg cgaccaggcc
     6601 gacgtcgtat tgcctggttc agcccagtac tgttttcgat ttgcggcgtg ggaagccgag
     6661 gtaaaggata aggtgccgca tcgcatttct gttcattgcg agttcgttga tggactcggt
     6721 agaatgaccg actacgctga agcaacgctc tgttactcgg cacctctgtt tctctaaaat
     6781 aaaatcttgc tttgccgatc caggcaatgt ggcctgatgt gggaggcaca atgacgacgt
     6841 tccggattgt acggatgtcc gaaattaatt tcgaggcaca gagcaacaga gaagattgcc
     6901 aactggggac gacgagcgga tatcggtctg gccttgcaat gatcagcacc ggcttgccct
     6961 gaccaacgcg actaaactgc cagcgagtca aacaggatgg tctcagccaa cctctgctgc
     7021 ttccaacgcc atgagcgcga aagtggccaa ccaatgctcg cccatatagt cctctgcgat
     7081 atgtgaaagg ctggcatcgc gatgttcggc cgcggcgctc agaattactg cagcgcgcgg
     7141 gtccgcgtct ggcatcgcac cggccagccg gctccagcac cacgcacggc tgaggttcaa
     7201 cccgtccaga tgggcgatct ttccatcggt tcggtcgctc gcaacaaccg gttgaaacag
     7261 cgtgcgcggt tcccgctgcc caagatgagg caaaaaacgc gtgaaccagg cagcgaattc
     7321 tccgggcggc agcatgcgcc gcatgcactc ggcctcgatc agacaaggcg acagaaaatc
     7381 ttcgccactg ggctcccagg cctgacagtc ggcgtcgtcc aagtaccaat catgggctgc
     7441 gcgggtcaat gcctcagcca gctcaacatc attccactcc tgcgcatagt ccatcgcgag
     7501 tgtcagagcg aatgccgtgc tggaatgcgc gccggtccgg atgggatagc gggcatttgg
     7561 cagaaaatcg cgaaaccgtc gggcgaatgc ctcagccaac ggttgcagtg cggcggagca
     7621 acgcgcggcc tcgtcgtcag gatgcgcgtg taactcggct gccagcttca gcagccaggc
     7681 ccaaccgtac ggtcgttcga acgtgcgagt aaacgggcgc gaaagatagg ccagttcgac
     7741 ggcgacatta ttgcggatca atgactttgc gaaatgctcg cgaattcggt ccgcctccgg
     7801 cagatcggga caaacacgca acagccgcgc cagcagccaa tacgcgtgca cgcaggaatg
     7861 ccagtcgaaa ctgccgaaga aaatcggatg cagcgcgcgc ggtgcgacca gatcctccgg
     7921 tccggccatc acatgatcca gtttgaccgg atattcccgc gtcacgtgac ccagtgcagc
     7981 gcgggcaaat tggctggtca aagtcggatc aagccccatg gcgcgtcaac cgcggccgat
     8041 gtagggcatc ttcgttgcca tcacggtcat gaactggaca ttcgcatcca gcgacaggct
     8101 cgccatgtaa gccacgccgc gtgccacgtc gttgacgtcg atgcgagctt ccgcctcgat
     8161 cttgccgctg gcctgcagcc ggcctcgagc ggtgtcttcg ttacgcgtgg tcgcggcatt
     8221 gccgatgtca atctggccgc aggcgatgtc gtattcgcgc ccgtccagcg acagcgcccg
     8281 cgtcaggccc gtcagcgcat gcttggtcga cgcatacggc acagaattcc gccgcggcac
     8341 atgcgccgac accgagccgt tattgatgat gcgtccaccg cgcggctgct gttccttcat
     8401 catgcgaaac gcatgttgtg cgcacaggaa cgagccggtc agattgaccg cgacgacgtt
     8461 cgaccattgt tcgagggtca aatcctcgat cggaatgtta cgcgtgctga taccggcgtt
     8521 gttgaacagc agatcgatcc ggccataggt tgccctgaca gtatcgaaca atgcagcaat
     8581 cgacgccggg tcggagacgt cggtcggcac tatcagcatt tgcggaggcg tcgctttggc
     8641 gagtgaagca gtctcctcca gcatggcacg gcggcggccg gcgagcacca cggaaaaccc
     8701 gtccgcgaat aatgtcagcg cggaggcccg tccgatgcca ctaccggccc cggtgatgac
     8761 tgcgatcttg cctactgtcg gcatggcccg ttcctctctt tgattacaac gttgcgccac
     8821 cgtcgatcgc aacctcggcg ccggtgatat agccgctttc gtcggacagc aggaacagca
     8881 cgaggctggc cacttcctcg gacgtgccca tgcgtctcat cggcaccagt tgcaaccggc
     8941 gctggttttg ttccggcgtg cgcacattta acatttcggt atcgataggc ccaggatgga
     9001 tggagttaac gcggattttc cggggggcga ggtcgacggc agcagccttg gtcatgccgc
     9061 gcagtgccca tttcgtggca ctgtaagcaa tcgctccggg agagcctcgt agtcccgcaa
     9121 cggacgagat attgacgatc gatccgccac ccgatcgttc catcaatggg acgacggcct
     9181 tcatgccaag gaagcagcca agctggttga tccgcatgtg gcgctcgaac agcgcggcgt
     9241 cggtctccat caaagttttc ggctggtaga tgccggcatt gttcaccaac ccatgcaacc
     9301 cgccgagttg cgccgcaacc tcgatcgctt gctcccagtc cgcttcccgc gtgacatcct
     9361 gaacgacgaa ccgcgcggcg ggaccgagtt cgtcggccag ttgcctgcct tcagcctcaa
     9421 gcacatcgcc gatgacgacg tgtgcaccct cggccacgaa cagcctcgcc tcagccgcgc
     9481 cctgaccgcg cgcgccgccg ctgatcagga tgatttttcc attgagccga cccatttgtt
     9541 cctcccgaac cctgcgaccg gattgcagca tgcgggcaac gggggctgct gtaaaaccga
     9601 ccgcaaggcc gtgccttcac aaccaatccg cagcagaggt gtcgctcacc atgtcacctg
     9661 tcacagaagg ggccacctcc ataaacggcg cctcgccaat gaacgatcct gcggccgccg
     9721 accggtcgga actgcgcgcc cagtaccggc cgcctgaaac gaccgtgctc ggtgccttgc
     9781 tcgatgccgc cacggttccg ccgccacttg ccgcgcgagt cgccgtgcgt gcccgggcat
     9841 tggtccgcgc cgcgcgggcc acgcacacgc ccggtgccga cgtatccgac tttctgcggg
     9901 aatacggtct tggcacgcgc gaaggtgtcg ctctgctctg tctggccgaa gcgctattgc
     9961 gcattcccga cgccgccacc gccgacgcct tcatcgaaga ccgcattacc ggtgtcgact
    10021 ggcagagcca tctcggccgc gccgacagcc tcaccgtcaa cgcctcatcc tgggccttca
    10081 tgttaaccgg acgcgtgttg gcgctcgaca ccgatcgcca ggccggagtg cagggcgcga
    10141 tccaacgcat ggtgcggcgg atcggtgagc cgttgatcca ggcagcctta cgccagggta
    10201 tgcgcgtgct ggctcgccaa ttcgtgatgg gccgcacgat cgaggaagcc ctgacccgcg
    10261 ccgccgcctc aacctcgcaa cgctggcgct acagcttcga catgctgggt gaggccgcgc
    10321 gcacccgaga cgacgccgcc cgctacatgc gcgcctatca ggatgccatc ggagcggttg
    10381 gccgcgccgg cggcggaccg gtcaacgggc ccgggatttc ggtaaaactg tccgcgctgc
    10441 atccccgcta tgagcccttg caggcggcga attgcgttcc actgttgatc gccgggctca
    10501 ccaccctggc gagagccgcg aagcaggcgg atatcgggct gaccgtggac gccgaggaag
    10561 cggatcgcct cgaaatcagt ctggacatct tcgccgccgt gctcgccgat cctggattgc
    10621 gtggctggga cggtctgggc ctggccgtgc aggcctatca gaagcgcgcg cggcctctga
    10681 tcgattggat cgcagacctt gcgggcaaaa ccgcccaccg tgtgccggtc cgcctcgtga
    10741 agggcgccta ttgggacacc gagatcaagc aagcccagtt gatggggtat gaaggatatc
    10801 cggtgttcac caggaagagt gcg
//
LOCUS       DATAVD010001330         4884 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2549742, whole genome shotgun sequence.
ACCESSION   DATAVD010001330 DATAVD010000000
VERSION     DATAVD010001330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4884
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2549742"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..1008)
                     /gene="denD"
                     /locus_tag="VHX39_25435"
     CDS             complement(34..1008)
                     /gene="denD"
                     /locus_tag="VHX39_25435"
                     /EC_number="1.1.1.410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-erythronate dehydrogenase"
                     /protein_id="HEX3994531.1"
                     /translation="MKISILGGGGFLGRKIAARLAKDGTLGGKAVTALTLFDMTEPPK
                     PDAAFPVTSIGGDIVALPDNAIPAGTDVVFHLAAVVSAQAEADYDLGRRVNVRGTDAV
                     VDRCRALGTRPRVVFTSSVASFSTNQDATLPDNTRQIPGNSYGAQKAAAELILADASR
                     RGFLDAVSLRLPTVIVRPGRPNKAASSFFSGIVREPLLGLDCELPVGDDFAVWVCSPR
                     RAVDWLLHAAALDTSKMGLDRSIDPPGISTTVAHLLQALEEVAPGASSHVKRVADDTI
                     AAIVSTWPAAFEALHARTLGFSAHEPILDVIRAFVEDDLEATKADRAR"
     gene            1072..2229
                     /locus_tag="VHX39_25440"
     CDS             1072..2229
                     /locus_tag="VHX39_25440"
                     /EC_number="4.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008838 - diaminopropionate ammonia-lyase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopropionate ammonia-lyase"
                     /protein_id="HEX3994532.1"
                     /translation="MSDRQKLDWLVNPRHGVPGITILPAAGFRRAKATITGWPGYEPT
                     PLLTLPGLTDVADVRIKHEGGRFGLGSFKALGGAYAVANLLTAELSRRGVTSAATSTD
                     LADGQYQYATQTITVTCATDGNHGRSVAWGAERFHCRCVIFVHETVSQGRVDAIARFG
                     ADVVRVPGNYDDAVHEADRQARAQNWFVVSDTSYPGYTEVPRDVMQGYRLMADEAADQ
                     WTGAPPTHVFMQAGVGGAAAAVSVQLRARFTPAPLLVVVEPDQAACLLASARVGTPTI
                     VQGNLDTIMAGLACGEPSLLAWQELERAAFAFLSIPDETAIDCLRILSAQGLEIGESG
                     VAGLAGLKLAAADPTARTALRLTHDSRVLLFGTEGVTDPAVYDRIRHSRQS"
     gene            2356..2874
                     /locus_tag="VHX39_25445"
     CDS             2356..2874
                     /locus_tag="VHX39_25445"
                     /inference="COORDINATES: protein motif:HMM:NF022607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2939 domain-containing protein"
                     /protein_id="HEX3994533.1"
                     /translation="MRARWPLLATVLSLGVAYVAYPYLALYRLGSAVKSADAATLEAL
                     VDWPAVREGIKEDVCDLAAENSSPTAGANLPPFGASFVRGITSASIDQTVTPQALLAV
                     AASEPAHPTPRGADIHINWAFFDSPTTFMVSLQSPGQADPIKLEMDLRHGAWRVYRVW
                     LPADLLEARART"
     gene            complement(2995..3381)
                     /locus_tag="VHX39_25450"
     CDS             complement(2995..3381)
                     /locus_tag="VHX39_25450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014238699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX3994534.1"
                     /translation="MNIKKGYKQLLAEANAEIETLTVESAIGLAGNADVVFVDLRDPR
                     EMEREGKMPGAFACTRGMLEFWIDPESPYAKPIFAEPKRFVFFCAGGWRSALAAKTAQ
                     DMGLEHVAHIEGGFGAWKKAGGPVFI"
     gene            3502..4245
                     /locus_tag="VHX39_25455"
     CDS             3502..4245
                     /locus_tag="VHX39_25455"
                     /inference="COORDINATES: protein motif:HMM:NF005451.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX3994535.1"
                     /translation="MDAEAGIQADTDYQARLDLAAVYRLLAQHGWGDVIFNHAAMRVP
                     SNPRHFLIKRHELLYTEVTASNLVEVSMDDDLDERSGVNRPGFTLHSGVLRGRPDVQC
                     SVHVHPEEGIALSGLKHGLRPLSQNSIRFYNRVGYHDYEGLTDSFDERERIVAALGKN
                     RALVMRHHGITTVGETAREAFSLMKEFVRAARIQLQMEATGAELLEIPGNVCERVAAQ
                     YQQHDRGRASAEWPAYLRQLDTIDPGYRS"
     gene            4273..4773
                     /locus_tag="VHX39_25460"
     CDS             4273..4773
                     /locus_tag="VHX39_25460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3994536.1"
                     /translation="MNPAWILRTGRLVLTPVGGADLPDMRAIKADPAVFAVMLGGVRD
                     PVQTAEDLAHNVVAWGEHGFGIWAIREAGRFVGITGLEHRLDGRGVALRFALWPEAQG
                     RGLAREAAFAALRFGHDRAGLPRIVAAARETNFGSRMVLGGIGMREADSFEQRGYTMV
                     LYESVV"
BASE COUNT          896 a         1571 c         1528 g          889 t
ORIGIN      
        1 ctgcgacgaa tggcgcttct ctgatgcgcg atgctaccgt gcgcgatccg cctttgtcgc
       61 ttccagatcg tcttcaacaa acgcccggat cacatccagg atcggttcgt gagcggaaaa
      121 acccagcgtc cgagcgtgca aggcctcgaa ggcggccggc caggtcgaga cgatcgcggc
      181 gatggtgtcg tccgcaaccc gcttcacatg cgacgaagcg cctggtgcca cttcctccag
      241 cgcctgcagc aaatgggcga cggtggtgct gatcccgggc gggtcgatgc tgcggtccag
      301 ccccatcttg ctggtatcca gcgccgcagc gtgcagcagc cagtccactg cccgtcgcgg
      361 gctgcacacc cagacggcga aatcgtcacc aaccggaagt tcgcagtcca gacccagcag
      421 cggctcccgc acgatgccgg agaaaaatga actggccgcc ttgttgggcc gtcccggccg
      481 gacgatgacg gtgggaagcc gcagcgacac cgcgtcgagg aagccacgcc gggaggcgtc
      541 cgccaaaatc aactcggccg ccgccttttg agcgccatag ctattgccgg ggatttgacg
      601 cgtgttgtct ggcagcgttg cgtcctgatt ggtactgaaa ctcgccacgg agctggtaaa
      661 taccaccctc ggccgggtcc ccagcgcgcg gcagcgatcc accaccgcgt cggtgccgcg
      721 aacgttgacc cgccggccaa ggtcatagtc ggcctcggcc tgggcgctga ccacagcggc
      781 gagatggaag acgacgtccg ttcccgccgg gatcgcgttg tccggcaatg cgacaatgtc
      841 accgccgatc gaggtaaccg gaaacgccgc gtcgggcttc ggcggctccg tcatgtcgaa
      901 cagggttagt gccgtgaccg ccttgccgcc cagtgtgccg tccttggcca accgtgccgc
      961 gatttttcgg ccaaggaagc caccaccgcc caggatcgaa attttcatct tagaaccctc
     1021 catcgacgcg actagattgc actggtgcgg tcgtcggtcc accgttccct catgagcgat
     1081 cgacaaaagt tggactggct ggtcaatcct cgacacgggg ttcctggcat caccatctta
     1141 ccggcggccg gattccgccg tgcgaaggcg acgatcaccg gctggcctgg atacgagccg
     1201 accccgctgc tgacattgcc gggcctcacg gacgtggccg acgtgcgaat caagcacgaa
     1261 ggcggccgct tcggcctcgg cagcttcaag gcgctcggcg gcgcctacgc ggtggccaat
     1321 ttgctgacgg ccgaactgtc gcgccgaggt gtcacctccg ccgctacgtc cacggatctg
     1381 gcggacggac aatatcagta cgcgacgcag acgatcaccg tcacgtgcgc gaccgatggc
     1441 aaccacggcc gttccgtcgc ctggggcgcg gagcggtttc attgccggtg cgtgatattt
     1501 gtgcatgaaa ccgtcagcca gggccgagtc gacgccatcg cccgcttcgg cgcggacgtc
     1561 gtgcgggtcc ccggcaacta tgatgatgcg gtgcatgagg ctgaccgaca ggctcgggca
     1621 caaaattggt tcgtggtctc ggacacttcc tatccgggat acacggaggt gccacgcgac
     1681 gtcatgcagg gctatcgcct catggcggat gaggccgcgg accagtggac cggtgcgcca
     1741 ccgacgcatg tgtttatgca ggccggcgtt ggcggggcag cggctgccgt atcggtgcaa
     1801 ttgcgtgctc gattcactcc cgctccccta ttggtggttg tcgaaccgga tcaggccgcc
     1861 tgcctgctgg caagtgcgag ggtcggcacg cccacgattg tgcagggcaa cctggacacg
     1921 atcatggccg ggctggcctg cggtgaaccc agcctgctgg cgtggcagga gttggagcgg
     1981 gcggccttcg ccttcctgtc gattccagac gaaaccgcaa tcgactgcct gcggatcttg
     2041 agcgcacagg gactcgaaat cggtgaatca ggtgtcgccg gccttgcggg gctgaagctg
     2101 gcggcggccg atcccactgc ccggacggcg ttgcgtctga cccacgacag ccgtgtcctg
     2161 ttgttcggca ccgaaggcgt caccgacccc gcagtgtatg acagaatcag acattcacga
     2221 cagagttaac ctgttatcaa ccagttgtgg catattgtct tgaaagaggg acggacaaag
     2281 ttccgttcgc tgcgttaagc taccggatat acagcgacgg cctcaaaacg aggccccttg
     2341 cgacggagcg tacagatgcg agccagatgg ccacttcttg cgacggtact gagcctgggt
     2401 gtcgcctacg tcgcctatcc gtatctggcg ctttaccggc ttggatcggc ggttaagagc
     2461 gctgacgccg ccacgctgga agcgctggtc gattggccgg cggtgcggga ggggatcaag
     2521 gaagacgtgt gcgacctcgc cgccgagaac tccagcccga ccgccggcgc caatttgcca
     2581 ccattcggtg cgtcattcgt ccgcgggatt acgtcggcct ccatcgatca gacggtaacg
     2641 ccacaggctc tgctggctgt cgccgcgagc gaacccgccc atcctacgcc aagaggcgcc
     2701 gatatccata taaactgggc attcttcgac agcccgacga ccttcatggt cagcctgcaa
     2761 tcgcctgggc aagcagatcc gatcaagctt gaaatggatt tgcggcacgg cgcatggcgc
     2821 gtatatcgag tgtggttgcc ggccgatctg ttggaagcga gggcccgaac gtagcggtcc
     2881 gagcccgacg ggagcattcc atacggtcgg gtgaactggt tcacaaaaat caacgggtcg
     2941 tgattcagcc tgcggcccac atggcgtgtc acgcgacagt ggcttcagtt tttctcagat
     3001 aaagacaggg ccgcctgctt ttttccaggc accgaaaccg ccctcgatat gggcgacgtg
     3061 ctcgagcccc atatcctgcg cggtcttcgc cgccaatgcc gaacgccacc ctccagcgca
     3121 gaaaaagacg aagcgcttcg gttcagcgaa gataggcttg gcgtaggggc tctccgggtc
     3181 gatccaaaat tccagcatgc cccgcgtgca ggcaaacgcg ccaggcatct tgccctcacg
     3241 ctccatctcc cgcgggtcac gcagatcgac gaataccacg tcggcattgc cggccagacc
     3301 gatcgcactt tcaaccgtca gcgtctcgat ctctgcattc gcttcggcaa gaagctgttt
     3361 gtagcccttc ttgatattca ttccggcaca cccccagcga tccggcgacc ctagtatcag
     3421 gcccgccatg cacgcaacca tttgccctac ccgcgtcccg gcggtattcg aaggatcgac
     3481 atcgtgttgg gaggcacgcc gatggacgcc gaagcaggaa ttcaagcaga caccgactac
     3541 caggccaggc tcgatctcgc ggccgtttac cggctgctcg cgcagcatgg ctggggcgac
     3601 gtaatcttca atcatgccgc catgcgcgtt ccatccaatc cgcgccactt cctgatcaag
     3661 cgacatgagc tgctctacac cgaagtcacc gcctccaacc tcgtcgaggt cagcatggac
     3721 gacgacctgg atgagcggtc gggcgtcaat cgtcccggct ttaccctgca cagtggcgtc
     3781 cttcgtggcc gcccggacgt gcagtgctcc gttcacgtcc atccggaaga aggcatcgcg
     3841 ctgtccggcc tgaagcatgg gctgcggccg ctgtcgcaga attccatccg cttctacaat
     3901 cgcgtcggct accacgatta cgaaggcctg accgacagct tcgacgaacg ggagcgcatc
     3961 gtcgccgcgc tggggaagaa ccgagcactg gtcatgcgtc accacggcat taccacggtg
     4021 ggggaaaccg cgcgtgaggc attctcactg atgaaggagt tcgtgcgcgc ggcgcggatc
     4081 cagctgcaaa tggaagccac gggtgccgaa ttgctggaaa tcccggggaa cgtatgcgaa
     4141 cgggtcgcgg cgcagtacca acaacatgat cggggacggg cgtcggccga gtggccggcg
     4201 tatcttcgac aactcgatac aatcgatcca ggctaccgtt cctgatctct tgccgaccgc
     4261 gccgggacta ctatgaaccc ggcctggatt cttcgaaccg gcaggcttgt cctgacgccc
     4321 gtgggcggcg ccgatctgcc cgacatgcgg gcgatcaagg ccgatccggc cgttttcgcc
     4381 gtgatgttgg gcggcgtccg cgaccctgtg cagacagccg aggacctggc gcacaacgtc
     4441 gtcgcatggg gcgagcacgg cttcggcatc tgggcaatcc gtgaagccgg ccgcttcgtc
     4501 gggatcaccg ggctggaaca tcgcttagac ggccgcggtg tcgcgttgcg cttcgcgttg
     4561 tggccggaag cacaaggacg cgggctggcg cgggaagccg ctttcgccgc gctgcgtttc
     4621 ggccatgatc gagccggtct gccgcgcatc gtcgctgccg cccgcgagac caatttcgga
     4681 tctcgcatgg tgctcggcgg catcggcatg cgggaggccg attcattcga gcagcgcggt
     4741 tacacgatgg tcctgtacga aagtgtcgtc tgattgacag gcgagcgggc ggtacgctgg
     4801 accacctcgc ccaggcgtga gccgggtcat cacccgcttc gtgagacctg attcttcatc
     4861 gcggcgatca gcgcatcgac gcta
//
LOCUS       DATAVD010001331         3852 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_874129, whole genome shotgun sequence.
ACCESSION   DATAVD010001331 DATAVD010000000
VERSION     DATAVD010001331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3852
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_874129"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..213)
                     /locus_tag="VHX39_25465"
     CDS             complement(<1..213)
                     /locus_tag="VHX39_25465"
                     /inference="COORDINATES: protein motif:HMM:NF024170.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX3994537.1"
                     /translation="MNIDLTEARFHDENAAREWFELSRWPNGVSCVHCGGVRPAKLGG
                     KIQSHRAGLFHCPDCRGQFTVRTGHVM"
     gene            432..1634
                     /locus_tag="VHX39_25470"
     CDS             432..1634
                     /locus_tag="VHX39_25470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3994538.1"
                     /translation="MDLRFTPEEIAFRQEVRAFIRDNLPPDIHAKMKLGHGPSKEDTV
                     RWQRILNAKGWAGLSWPKQWGGPGWTAIQKMIFLEENQMAPAPELSSFNIIMIGPVLL
                     QFGTEEQKQRFLPRAANLDDWWCQGFSEPGAGSDLASLKTAAKLDGDHYVVNGQKIWT
                     STAHHADWCFLLVRTNPNARKRQEGISFLLVDMKTPGITVRPIISIDGSHHLNEVFFD
                     DVRVPVSLRVHEENKGWDVAKFLLGNERTGIARLGKSKERVDASIDMARKVNMNGQPL
                     VTDPAFRQRVAQLQVDMKALEITQYRVVSAYDKAGGGRPDPLSSVLKVKGTELLQATT
                     ELAVDVAGPMATPIWASELAAMNEPDDMLEAGSASTGSYLFLRAASIYGGTNEIQKNI
                     LTKAVLGL"
     gene            1647..2774
                     /locus_tag="VHX39_25475"
     CDS             1647..2774
                     /locus_tag="VHX39_25475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3994539.1"
                     /translation="MDFEPSDEQRLLLESVSRLLADNYGFAQRKTYLARPEGFSSEMW
                     GKFAELGLLGLPFAEQYGGFGGGAQEIMLVMQAFGRVLVLEPFLSTVVLGGTAIQAAG
                     SEAQKIVLLPAIAEGGLKLAFAHGERQARYDLTDVVTTAKQNGSGWLLDGSKTVVSHG
                     EAADKLIVSARTSGERYDEDGITLFLVDAAAPGVARRGYATRDETRAADISLSNASGE
                     VLGEIGKGLAIIEKIVEAGIAATAAETVGAMEAMNEMTLEYSKTRVQFGQPIGSYQVV
                     QHRLSDMFMTQEQGRSMAMLATMSVDNQDDAERRHDFALAKVGVGQAGRYVSQSAVQM
                     HGGIGMTEEYAVGHYFRRCMVIERLFGDPAYYLQRLANEIG"
     gene            3070..3846
                     /locus_tag="VHX39_25480"
     CDS             3070..3846
                     /locus_tag="VHX39_25480"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3994540.1"
                     /translation="MIATERMAIHGVDLEVLRGGEGDPIVLLHGMRSLTAASRFPPLL
                     AAHGSLLAPSCPGFGASPRPKDFDTIYDLVHLQRAVLDAIPGERITLVGLSFGGWLAA
                     EVAAQGHPRLARLVLVDPVGIKISDRETADILDVFNRSPAEVRQAAWHDPDRFAPDFD
                     AMEDAEIVRHARDWDALCLYAWHPYMYNSQLPRWLGRIAVPTLIAWGENDGIVSPGYG
                     RTLAGLIPGAQFETIADCGHHPEIERPEQLAALIGSFVKG"
BASE COUNT          753 a         1139 c         1255 g          705 t
ORIGIN      
        1 catcacatgg ccggtgcgca cggtgaactg gccacgacag tccggacagt ggaacaagcc
       61 agcgcggtgg ctctgtatct tcccgccgag tttcgctggc cggacgccgc cgcaatggac
      121 gcaggaaacg ccattcggcc agcgcgacag ttcgaaccat tcgcgggcgg cgttctcatc
      181 gtggaagcgg gcttcggtca gatcgatgtt cacggcggat gtccttctca gtgtcaggac
      241 cttacgccct cccgctctgc tttgtcaact gagtaattgg gatcaaaaat cgcgtcaaag
      301 gaatttttac cgtagtcggt catggcgagg cgcgggttgg cccgggcacc cacaagctgc
      361 cggcgcaggc actgcagatt gcgcgggtcc caccggctgg ctaagctacc agtcagtagg
      421 aggacccatc catggatctg cgcttcacac cggaagaaat tgcgttccgc caggaggtgc
      481 gcgccttcat ccgcgacaac ctgccccccg acattcacgc caaaatgaaa ctgggccatg
      541 gccccagcaa ggaagacacg gtacggtggc agcgcatttt gaacgccaag ggatgggccg
      601 gattgtcctg gccgaagcaa tggggcggac ccggttggac cgcaatccag aagatgatct
      661 tcctggaaga aaaccagatg gcgccggcac cggaactgtc gtcattcaac atcatcatga
      721 tcggcccggt cctgctgcaa ttcggcaccg aggagcagaa gcaacgcttc ctgccccgcg
      781 ccgccaacct ggatgattgg tggtgccagg ggttctccga gccaggcgcc ggctccgatc
      841 tggcatcttt gaaaaccgcg gcaaaattgg acggcgatca ctatgtcgtg aacggacaga
      901 agatctggac ctccaccgca catcacgccg actggtgttt tctgctggtg cgcaccaacc
      961 cgaacgctcg caagcggcag gaagggattt cgttcctgct ggtcgacatg aagacaccgg
     1021 gcatcacggt gcggccgatc atttcgatcg atggcagcca tcatctgaac gaagtgttct
     1081 tcgacgacgt gagggttccg gtcagcctgc gcgtgcatga ggaaaacaaa ggttgggatg
     1141 tcgccaagtt cctgcttgga aacgagcgca ccggcattgc ccggttgggc aagtcgaagg
     1201 agcgggtcga cgcctcgatc gacatggcgc gtaaggtcaa catgaacggc cagccattgg
     1261 tcaccgatcc ggcattccgc cagcgcgtgg cgcaattgca ggtcgatatg aaggcgctgg
     1321 agatcaccca gtaccgggtc gtttcggcct atgacaaagc cggcggcggg cggccggatc
     1381 ctttatcgtc ggtattgaag gtaaaaggca ccgaattgtt gcaggccacc accgaactcg
     1441 cagtcgacgt cgcaggcccg atggcgacgc cgatctgggc ttccgagctg gcggcaatga
     1501 acgaaccgga tgacatgctg gaagccggca gcgcctcgac cggcagttat ctgttcctgc
     1561 gcgccgcatc gatctacggc ggcacgaatg aaatccagaa gaacattctc accaaagcgg
     1621 tgcttggtct ttagtggggg gctgtaatgg attttgaacc gtcggacgag caacggctgc
     1681 tgctggaaag tgtcagccgg ctgctcgcgg ataactatgg tttcgcacag cgcaagacgt
     1741 atctggcgcg gccggaggga ttctccagcg agatgtgggg gaagttcgcc gagctcgggc
     1801 tgctcgggct gccgtttgcc gagcagtacg gcgggttcgg cggcggcgcg caggaaatca
     1861 tgctggtgat gcaggcgttc ggccgcgtgc tggtgctgga gccgtttctc tcgaccgtcg
     1921 tgcttggtgg taccgcgatc caggcagcag gcagcgaagc gcagaagatc gtgctgttgc
     1981 ctgcaatcgc cgaggggggc ctgaagctgg ccttcgcaca cggcgaacgg caggcgcgct
     2041 acgatctaac cgacgttgta acgaccgcga agcagaacgg ctcgggctgg ttgctggatg
     2101 gatcgaaaac cgtagtgtcg cacggcgagg cggcagacaa gctgatcgtc agcgcccgca
     2161 ccagcggtga gcgctacgat gaagacggca tcacgctgtt tctggtcgat gccgcggcac
     2221 cgggcgttgc acgccgcggc tacgccacgc gcgatgaaac gcgggcggcg gatatttcac
     2281 tgtcgaatgc ctcgggtgaa gtactcggcg agatcggcaa aggacttgcc atcatcgaaa
     2341 agatcgtcga ggccgggatt gccgcgaccg ccgccgaaac cgtcggcgcg atggaggcga
     2401 tgaacgaaat gaccctggaa tacagcaaga ccagggtgca attcggtcag cctatcggct
     2461 cgtatcaggt tgtgcagcac cggctgtcgg acatgttcat gacgcaggaa cagggtcgca
     2521 gcatggccat gctggcgacg atgtcggtgg acaaccaaga tgacgcggag cgacggcatg
     2581 acttcgcgct ggccaaggtg ggcgtcggtc aggccggacg ctacgtgtcg caaagcgccg
     2641 tgcagatgca cggcgggatc ggaatgacgg aggaatatgc cgtaggacac tatttccggc
     2701 gctgcatggt gatcgagcgg ctgttcggcg acccggcgta ttatttgcaa cgactggcga
     2761 acgagatcgg gtgattggtc cgggggatga agggcggggc ttccgacccg gaccccgacc
     2821 agggccgctg cccctggacc ctgccaaggg cagcggccct tggaaccatt cattttggtt
     2881 ggggaatggg agagggccga ccgtgacgct catcaaagtc tgtgtcggcc ctttcccatt
     2941 ccccaaccaa tggacagatt gcaaaggtcc tcgacctttg ctgggatcga gccgcgaagc
     3001 ggatcgatgg ggcaaagccc ctggcgggtt cgagggcaaa gccctgacct ttcaacccag
     3061 gagcatcaca tgatcgccac cgaacgcatg gccattcacg gcgtcgacct tgaagttctg
     3121 cgcggcggtg agggcgaccc gatcgtgctg ctgcacggca tgcgcagcct gacggcagcg
     3181 tctcggttcc ctcccctgtt ggccgcgcac ggttcgttac ttgcgccgtc gtgcccaggg
     3241 ttcggtgcgt cgccgcgccc aaaggacttc gacacgatat acgatctcgt gcatttgcaa
     3301 cgtgccgtac tcgacgcgat cccaggcgag cggatcacgc tggttggcct gtcattcggc
     3361 ggctggctcg ccgccgaggt tgccgcccag gggcatccac ggctggcacg cctggtgctg
     3421 gtggatccgg tcggcatcaa aatcagcgac cgcgagaccg ctgacatcct tgacgtgttc
     3481 aatcgttcgc ccgccgaagt gcgccaggcc gcctggcacg atcccgatcg ttttgctccg
     3541 gatttcgacg ccatggagga cgccgaaatc gtgcgccacg cccgcgactg ggacgcgctg
     3601 tgtctctatg cctggcaccc ctatatgtac aattcgcaac tgccgcgctg gttgggccgc
     3661 attgccgtgc cgacactgat cgcctggggc gagaacgacg ggatcgtctc gccgggctat
     3721 ggccgcaccc tggccggtct gatcccgggt gctcagttcg aaacgatcgc cgattgcggc
     3781 catcatccgg agatcgagcg gccggaacag cttgccgcct tgatcggttc attcgtgaag
     3841 ggctgaccga tg
//
LOCUS       DATAVD010001332         1683 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1802246, whole genome shotgun sequence.
ACCESSION   DATAVD010001332 DATAVD010000000
VERSION     DATAVD010001332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1683
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1802246"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..211
                     /locus_tag="VHX39_25485"
     CDS             <1..211
                     /locus_tag="VHX39_25485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994541.1"
                     /translation="ALLVAGSLPFFLGLAVVIPVLGHATWHLYREVIAPDPNPKPIPP
                     RPQLEKRFAADFPAALFSWRRKNDA"
     gene            425..1189
                     /locus_tag="VHX39_25490"
     CDS             425..1189
                     /locus_tag="VHX39_25490"
                     /inference="COORDINATES: protein motif:HMM:TIGR02283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEX3994542.1"
                     /translation="MPTASHAAVACNTGTFDAWLADFKTDAAAKGISQAAIAAGLNGV
                     TQDKTVLARDHSQAVFNQTFEQFSGRMVPPRLLRGSNMLKQYGSVLVRIEQAYGVPAE
                     VIVAIWGLETDFGANNGKFPTIRSLATLAYDCRRSDEFRAELIDALRIIERGDIAPAE
                     LKGAWAGEVGQTQFMPSSYIKYAVDFDGNGHADLLHSVPDVLASTANFFVGHGWQKGK
                     GYDPGSPNFAVIQQWNKSEVYARTIAYFATQLAHAP"
     gene            complement(1272..1631)
                     /locus_tag="VHX39_25495"
     CDS             complement(1272..1631)
                     /locus_tag="VHX39_25495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994543.1"
                     /translation="MKFIPKVLRDARSIVAQIPAMTLGLSKTELESNMINKLLGAAAM
                     AAILYSTVPASAAHMGGCSGANMTKTESMIDTMADGPGRMMAQKEVAMAQTAMLDGKM
                     GACAMHLGKAMHAGMMK"
BASE COUNT          315 a          531 c          486 g          351 t
ORIGIN      
        1 ggcattgctg gtggcgggat cgctgccgtt cttcctcggc ctcgccgtgg tgattcccgt
       61 gctcggccat gccacctggc acctctatcg cgaggtgatc gcaccggatc cgaacccgaa
      121 gccgattccg ccccggccgc aactggaaaa acgctttgcg gcagattttc cggccgccct
      181 gttttcatgg cggcggaaga acgacgcctg aacgggcaaa gataggccga attgaggccc
      241 gccggcgcca tttagtccgg cgggaatgat gcgtttgagg aggcggaggc cattttttgg
      301 ccgcgcttgc cgcggaaatt tcgtgctaag agacacctgt cccatcacga gacgattccc
      361 ggagcgcgcc ctgctgatcc ctcgttctct gattgcggtt ttggccgtcg gcgctgcgct
      421 gaccatgccg accgcatccc acgccgctgt cgcttgcaac accggcacgt ttgacgcttg
      481 gctcgccgac ttcaagaccg atgccgctgc caagggcatt tcacaggccg cgatcgctgc
      541 aggtctgaac ggcgtgaccc aggacaaaac cgtgttggcg cgcgatcact cgcaggccgt
      601 tttcaaccag acctttgagc aattctccgg ccgcatggtc ccgccacgtc ttctgcgcgg
      661 cagcaatatg ctgaagcaat acggttcggt gctggtgcgg atcgagcagg cctatggcgt
      721 acccgccgag gtgattgtcg cgatctgggg actggaaacc gattttggag ccaacaacgg
      781 gaaatttcca acgatccgtt cgctggcgac gctggcttac gactgccgac gttcggacga
      841 attccgcgcc gagctgatcg atgcgctacg catcatcgag cgtggcgata tcgcgcctgc
      901 ggagctgaag ggcgcctggg ccggcgaagt cggccagacc cagttcatgc cgtcgtccta
      961 catcaaatac gccgttgatt tcgacggcaa tggccacgcc gatctcctgc acagcgtgcc
     1021 cgacgtgctg gcctcgaccg ccaacttttt cgtcggccac ggatggcaaa agggcaaggg
     1081 ctatgacccc ggcagtccga atttcgcggt gatccagcag tggaacaaga gcgaggtcta
     1141 cgccaggacc atcgcctatt tcgcgaccca actcgcccac gcgccatagt cgcaacggac
     1201 gtcttgaacc ccgttagccc gagcctaggg ccgatcgctc tgcaatcggc cccctgcccc
     1261 caatagttgg attacttcat catccccgca tgcatcgcct tgccgagatg cattgcgcag
     1321 gcgcccatct tgccatcgag catcgcggtc tgcgccatcg cgacttcctt ctgcgccatc
     1381 attctgcccg gaccgtcagc catggtgtcg atcatggatt cggtcttggt catgttggcg
     1441 ccgctgcagc cgcccatgtg agccgcagac gcaggaacgg ttgagtacaa aatggcggcc
     1501 attgcggccg ctccgagtaa cttattgatc atgttacttt ccagttctgt ttttgacaga
     1561 cccaacgtca ttgctggaat ctgtgcgaca attgatcgcg catcgcgcaa aactttcgga
     1621 atgaatttca cgcgagtgat ttgtgatcaa cgcgtgacgc agagcgtcat gcgaaacatc
     1681 gcg
//
LOCUS       DATAVD010001333         6039 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_312600, whole genome shotgun sequence.
ACCESSION   DATAVD010001333 DATAVD010000000
VERSION     DATAVD010001333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6039
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_312600"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VHX39_25500"
     CDS             complement(<1..182)
                     /locus_tag="VHX39_25500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994544.1"
                     /translation="MLPALPVTDALPALKSVLDAGRAAVLVAPPGAGKTTLVPLELLS
                     APWRGDGKILMLEPRRL"
     gene            complement(441..1430)
                     /locus_tag="VHX39_25505"
     CDS             complement(441..1430)
                     /locus_tag="VHX39_25505"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3994545.1"
                     /translation="MHAGLFVTLETESRFDLSAHLAEITAQVRTANDAGFGSLWFPQH
                     FVTGPNMRQFAASPIMGYLAHLSGGMRLGTAVLLLPMLNPVLLTEEAATLDHLTGGNF
                     VLGVGLGYRDNEFAAMGIERKSRVPRFREYVQAMRLLLNGDHVTFHGRYVKLDDVSLS
                     VRPLNPAGVPIWIGGTVPDAIKRAAELGDSWQGAGAMSMDEMKRWWNLFHETRVALDK
                     PTDYPRQVSRECFCGPSMNAAIDLAKGPIAAKYTRYASHGFGGFDGGAEAFRQFAQDR
                     FVVGDEAFVRDELQRYRDELGATEFRFRMAWPGLPQDEVLASIKRVGKIVASL"
     gene            complement(1589..2392)
                     /locus_tag="VHX39_25510"
     CDS             complement(1589..2392)
                     /locus_tag="VHX39_25510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEX3994546.1"
                     /translation="MANEAVARPAATIVLLRDGAQGLEVFMVVRHHAIDFASGALVFP
                     GGRVDDNDFALARNAALCPNPDGIDTEAMAFRLAAIRETFEECGVLFARPNGGATLID
                     AATLRSVERTHRVPLAEGRISFADVLTAFKLLPATDLLAHFAHWITPRHQPKRYDTQF
                     FLADAPSEHLAVHDGAEAVDSLWITPRQVLADTATGRFRLVFATQMNVMKLAHYGTAA
                     EAIETARATTVVTVLPEATQIDATRRVMRIPIEAGYGAAEFMVDNPPAS"
     gene            2488..3690
                     /locus_tag="VHX39_25515"
     CDS             2488..3690
                     /locus_tag="VHX39_25515"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3994547.1"
                     /translation="MSRGARGGWGSMAASSVTGSQSDMETSRASNPLFGPNRFKLGVF
                     SANCDGGLTMSLAPERWPCHWDDIAAMSVLADEAGLEFILPVAKWRGYQGKANVYGKS
                     FETLTHGAALAALTKRIAIFSTVHVPLVTPAFAAKAIATIDHISHGRAGLNIVCGWNQ
                     NEFDLHGVTIDPATRYEHGLEWFEIWSRLLRGGPEFDWDGRFFHLKKLQTDPVSIQRP
                     WPAVMSAGFSPAGRDFAARTADVLFLNVTELGQVPGILADVAAQMARHNRSISVFTMG
                     HVVCCPTRREAEAYFHYFAEEMEDPEGQAYYIENRGATVTDGTRQIARPLLNRFHRAT
                     GLSYAGAYPGVYPFVGTPDDIADEMARMSAAGLAGCTVAFVDYLKEIPFFLAEVLPRL
                     ERLGLRGQ"
     gene            complement(3684..4589)
                     /locus_tag="VHX39_25520"
     CDS             complement(3684..4589)
                     /locus_tag="VHX39_25520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX3994548.1"
                     /translation="MPIWIFISVAAALLQCWRTAMQQKLRNLLSVNGAGFVRYLYGMP
                     TAAVLLVIAVAVTGDPIPAINPLFLMYCVLGGLFQIVATNLLIMSFGYRNFAVGTAYS
                     KTETVQSAILASFVLHEHPHTLAWIGMCIGLVGVVTLSLAGRGMQPKELLAATVQPAA
                     VCGLGAGLVFAFTTVFIKLGNQSLIGPSLVVRALFTLVVTNILQILMQGGYLYWREPR
                     ELRKAVTSWRSSMWVGTLSGCGSACWFTGFAIAEVALVRAVGQIEIVFTLLFSRFYLK
                     EVLKRTDVAGLGLVVFGVLLVVLGH"
     gene            4763..>6039
                     /locus_tag="VHX39_25525"
     CDS             4763..>6039
                     /locus_tag="VHX39_25525"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3994549.1"
                     /translation="MIYDYIICGGGSAGSVLANRLSARSANKVLLLEAGQDTPHGKVP
                     AAVLDSYPGTAYLNPNFTWNQLKVTTEVISHNNPDAPRPPLRTYEQARILGGGSSING
                     QLANRGAPTDYDEWQARGASGWNWENVLPYFKKVERDMDFDGPWHGSEGRIPVRRIFP
                     DLWPEHAKSVAEAFKQAGWEYIVDQNAEWRDGYFPITISNAYERRVSAAIGYLDPGTR
                     MRDNLTISTETQLASLIFEGNRCVGVKAMAGGREQEFRGNEIILSCGAIHSPAHLMRA
                     GIGPVGHLRDLGIDVRVALPGVGQRLQDHPAAAVAAFLKPHARIIHDYTRRHIYVSLR
                     YSSNLPDIPAGDMMTVVTNKTSWHAVGEQIGSFIVTVYKTYSDTGEVKLRSANWRDEP
                     SVDFNLLSDQRDLERMMDGVRRFSAMHLTPLLE"
BASE COUNT         1206 a         1899 c         1817 g         1117 t
ORIGIN      
        1 aggcggcgcg gctccagcat caggatcttg ccgtcgcctc gccagggtgc ggatagcagt
       61 tcgaggggga ccagcgtggt tttaccggcg cccggcggag cgaccaggac cgcggcacgg
      121 cctgcgtcga ggaccgattt cagcgccggc agcgcgtcgg tgacgggcag agcgggaagc
      181 atgattacgc gcctgattgc atcatgcgat gagcaggacg cgtccggtcc gtatcgacaa
      241 aagtgttccg cgcacttacc atcgttccat acaaggaatc atctgtgtaa atctctggat
      301 atctgtgtgc atctgcgttt ccccttcctg gcgccgattc gcgcgcggtc agcggctatt
      361 ttggtttagt ctcagcaaga atgaaaaccc agatgcgctg gtgggcgagc ggcgccggcc
      421 ggcgtgttta tgaacttgca tcacagcgac gccacgatct tgccgacgcg ctttatgctg
      481 gcaagcacct cgtcctgcgg caaaccgggc cacgccatgc gaaagcggaa ctcggtggcg
      541 ccgagttcgt cgcggtaacg ttgcaactcg tcgcgcacaa acgcctcatc gcctaccaca
      601 aatctatcct gggcgaactg acgaaatgcc tcggcgccac cgtcgaatcc gccgaaccca
      661 tggcttgcgt aacgcgtgta ctttgctgca atcgggcctt tggcgagatc aatcgctgca
      721 ttcatgctcg gaccgcagaa gcattcccgt gacacctggc gcgggtaatc cgtcggtttg
      781 tcaagcgcaa cccgggtctc gtgaaacaag ttccaccagc gtttcatttc gtccatcgac
      841 atcgcgccgg cgccttgcca cgaatcgccc agttcagcgg cgcgtttgat ggcgtcgggg
      901 acggtgccac cgatccagat cggcacgccg gccggattga gtgggcgcac gctgagacta
      961 acgtcgtcaa gtttcacgta cctgccatgg aacgtgacat gatcgccgtt cagcaacaac
     1021 cgcatcgcct ggacgtattc gcgaaagcgc ggcacccggg attttcgctc aatgcccatg
     1081 gccgcaaact cattgtcgcg gtagccgaga ccaacaccaa gcacgaagtt gccgccggtc
     1141 agatgatcga gcgtggcagc ttcttccgtc aacaaaacag gattgagcat cggaagcagc
     1201 aacaccgcag tgccgagacg catgccaccc gagaggtgcg ccagatatcc catgatcggc
     1261 gaggcggcga attgccgcat atttggtccg gttacgaaat gctgcgggaa ccacagcgag
     1321 ccgaaccctg cgtcattcgc ggtcctgacc tgcgccgtta tttccgcgag atgcgcggaa
     1381 aggtcgaagc gggactcggt ttccagagtg acgaacaggc cggcgtgcat ggttggtttc
     1441 cttttctggc ggggtgccga ttgggtcatt gcattctgat gggccaggcg cgctgcactg
     1501 ccaaacgaat ctccgaggac gcggagattt tgccttactg gccggcgaag caggatctgc
     1561 cgccggttcg cacgacgcca cccatgcatc acgatgccgg cggattgtcg accatgaact
     1621 cggccgcgcc ataaccggcc tcgatcggga tgcgcatcac ccggcgcgtg gcatcgatct
     1681 gagtggcctc gggcaacaca gtgacgacag tcgttgcgcg cgcggtttcg atcgcttcag
     1741 cggcagtgcc gtaatgcgcc agcttcatca cattcatttg cgtcgcaaac accagacgga
     1801 agcgcccggt ggcggtatcg gccagcacct ggcgcggcgt gatccacagc gaatcgaccg
     1861 cttccgcgcc gtcatgcacc gccagatgct cgctcggtgc gtcggccaga aagaactgcg
     1921 tatcgtagcg tttcggctgg tgccgcggcg tgatccagtg cgcgaaatgg gcgagcagat
     1981 cggtggcggg cagcagtttg aacgcggtca gcacatcggc gaaactgatg cgtccctcgg
     2041 ccaatggtac acggtgcgtg cgttccaccg aacgcaatgt cgccgcgtcg atcaacgtcg
     2101 cgccgccgtt cgggcgcgca aacaacaccc cgcattcctc gaacgtctca cggattgcgg
     2161 cgagccggaa cgccatcgct tcggtatcga tcccatccgg gttcgggcac aacgccgcat
     2221 tgcgggccag cgcaaaatca ttgtcgtcga cccgtccacc gggaaacacc agcgcacccg
     2281 aggcaaaatc gatggcgtga tggcgcacca ccatgaacac ttccaatcct tgcgcaccat
     2341 cccgcagcag cacgattgtc gccgctgggc gggccaccgc ttcgttcgcc atgcgtcatg
     2401 ttccttccgt cccgccaacc ctgaaagaca aggccgacgc cgctgtctta accgcgccgg
     2461 cgccagcggg ccagcccgga ggaaaccgtg tctcgcgggg cccgtggcgg ctggggtagc
     2521 atggcggcca gcagtgtgac cgggagccaa tcggatatgg aaacatcgcg tgccagcaat
     2581 ccgctgttcg gccccaaccg gttcaaactc ggtgtgttca gcgccaactg cgacggcggc
     2641 ctgaccatga gcctggcgcc tgagcgctgg ccgtgccact gggacgacat cgctgccatg
     2701 agcgtactcg ccgacgaggc tggcctggaa ttcatcctgc cggtcgccaa atggcgcggc
     2761 tatcagggta aagccaacgt ctacggcaaa tccttcgaga ccctgacaca tggcgcggcc
     2821 ctggcagccc tgaccaaacg gatcgccatc ttttccaccg tgcatgtgcc gctggtgacg
     2881 ccggccttcg cggccaaggc aattgccacg atcgatcata tctcgcatgg ccgggccggc
     2941 ctcaacatcg tgtgcggctg gaaccagaac gaattcgatt tgcacggcgt gacgatcgat
     3001 ccagccaccc gctatgaaca cggattggag tggttcgaaa tctggtcccg cctgctgcgt
     3061 ggcggtccgg agttcgactg ggacggccga ttctttcatt tgaagaaatt gcaaaccgac
     3121 ccggtgtcga tccaacggcc atggcctgcc gtcatgtcgg ccgggttctc tcccgccggc
     3181 cgcgactttg ccgcgcggac cgccgatgtg ctgttcctga acgtcacgga actcggccag
     3241 gttcccggca tccttgccga tgtcgcggcg cagatggcgc ggcacaaccg ctcgatctcg
     3301 gtgttcacca tgggccacgt cgtctgctgc ccgacccggc gcgaggccga ggcgtatttc
     3361 cattatttcg ctgaggaaat ggaggatccg gagggtcagg cctattacat cgaaaaccgc
     3421 ggtgcgacgg tgaccgacgg cacgcgtcag attgcccgtc cgctgctgaa ccgcttccat
     3481 cgcgccaccg gtctgagcta tgccggcgcc tatccgggcg tttatccgtt cgtcggcacg
     3541 cccgatgaca tcgcggacga aatggcgcgc atgagcgcag ccggccttgc cggctgcacc
     3601 gtcgccttcg tcgattacct gaaggaaatt ccattctttc tcgccgaggt gctgcccaga
     3661 ctggaacgtc tcggcctgcg gggtcagtga cccagcacga ccagcaggac tccgaagaca
     3721 accagcccga ggccggctac gtcggtgcgt ttgagcactt ccttaagata aaatcggctg
     3781 aacaacaggg taaaaacgat ctcgatctga ccgacggcgc gcaccaacgc tacctcggca
     3841 atcgcgaagc cggtgaacca gcaggccgag ccgcaacccg acaacgtgcc aacccacatc
     3901 gaactgcgcc acgacgtcac cgctttccga agttctcggg gctcgcgcca atacaaataa
     3961 ccaccctgca tcagaatttg cagaatattc gtcaccacca gcgtaaacag cgctcgcacc
     4021 acgaggctcg gtccgatcag cgactgattg ccgagtttga tgaacaccgt ggtgaatgcg
     4081 aacaccaggc ccgcaccgag cccgcacacc gctgccggtt gcacggtcgc tgccagcaat
     4141 tctttcggtt gcatgccgcg gccggccagt gacaatgtca ccacgccgac cagaccgatg
     4201 cacatgccaa tccaggccag cgtgtgcgga tgctcatgca gcacgaaaga ggccagaatg
     4261 gcgctctgca ccgtttcggt tttggaatag gcggtgccga cggcgaaatt ccggtagcca
     4321 aacgacatga tcaacagatt ggtggcgacg atctggaaca gtccacccaa cacgcaatac
     4381 atcagaaaca gcgggttgat tgcggggatc ggatcgccgg tgaccgcaac ggcgatgacc
     4441 agcaagaccg ccgcagtggg cattccgtac agataacgaa caaaacccgc gccgttgacc
     4501 gacagcagat tacgcaactt ctgctgcatt gcggtacgcc agcactgcaa cagcgccgca
     4561 gcgactgaga tgaaaatcca gatgggcatc gtccaggtcc ggttgcctcc ggaccggccc
     4621 ggctgctcgg tgcctatgct attgcctgga ggatatcggt caagctgtcc cgctttgtat
     4681 ccggcgcact gtcccgtaat gtcccgtcac cgtgcaagcg agcacggccg ggttacgatt
     4741 tgcggtcctt tggggggagc acatgatcta cgattatatc atttgcggcg gaggctccgc
     4801 cggctcggtg ctggccaatc ggctgtcggc ccggagcgcc aacaaggtgc tgctgctgga
     4861 agccggtcag gacacgccgc atggcaaagt cccggcggcc gtgctggatt cttatccggg
     4921 cacggcttac ctcaatccaa atttcacctg gaaccaattg aaggtcacca ccgaggtcat
     4981 ctcgcacaac aatcccgacg caccacgccc accgctgcgc acgtacgaac aggcgcgtat
     5041 ccttggcggt ggctcgtcga tcaacggcca gcttgccaac cgcggcgcgc caaccgacta
     5101 cgacgagtgg caggcccgcg gcgcatccgg ctggaactgg gagaacgtgc tgccgtattt
     5161 caaaaaggtc gagcgcgaca tggacttcga cgggccctgg cacggaagcg agggccgcat
     5221 tccggtgcgg cgcatttttc cggatttgtg gccggaacat gcgaaatcag tcgccgaggc
     5281 gttcaagcag gccggttggg aatacatcgt tgatcagaat gcggaatgga gggacggtta
     5341 tttcccgatc accatttcca acgcctacga acgccgggtg tcggcggcga ttggttatct
     5401 cgatcccgga accagaatgc gggacaacct gacgatctcc accgagacgc aattggcaag
     5461 cctcatcttc gaaggcaatc gttgcgttgg cgtcaaagcg atggccggcg ggcgcgaaca
     5521 ggaattccgt ggcaacgaaa tcattttgtc atgcggcgca atccactcgc cggcccattt
     5581 gatgcgcgcg ggcatcggtc cggttgggca tctgcgcgac ctcgggatcg atgtgcgggt
     5641 ggcgctgccc ggtgtcggac aacggctgca ggatcatcct gcggcggcgg tggcggcgtt
     5701 tctgaagccg cacgcacgca ttattcacga ttacacgcgg cggcacattt atgtctcgtt
     5761 gcgttattca tccaacctgc cggacattcc ggccggcgac atgatgacgg tggtgaccaa
     5821 caaaacctcg tggcacgcgg tgggcgaaca aattggttct tttatcgtta cggtctataa
     5881 aacctattcc gacacgggcg aggtgaagtt gcgctcggcc aactggcgtg acgaaccgtc
     5941 ggtggacttt aatctgctgt ccgatcaacg cgacctggaa cggatgatgg acggcgtgcg
     6001 ccgattcagc gccatgcatc tgacccctct gctggagag
//
LOCUS       DATAVD010001334         4645 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3665973, whole genome shotgun sequence.
ACCESSION   DATAVD010001334 DATAVD010000000
VERSION     DATAVD010001334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4645
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3665973"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VHX39_25530"
     CDS             complement(<1..195)
                     /locus_tag="VHX39_25530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994550.1"
                     /translation="MIKKYLLGDFVLRDSLDESYAPPTQCPADRTFFAAVLAEPGKVR
                     RLGNAECADQRQVHGSSDDGS"
     gene            399..2129
                     /locus_tag="VHX39_25535"
     CDS             399..2129
                     /locus_tag="VHX39_25535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994551.1"
                     /translation="MSQPGDFANAAEAIRSASALIEVTFLRVGQTLEASSGILEDLTC
                     RFAAVLQELAGDKPGQALQALLKMADQVIDLGKSRSRENIRFEQMRSLIESVTNRIAQ
                     MKVSLKDIEALAVNSKIAAAVIRAPGTDFTSFADEIGRTLRLTRTTLDQFGAELHLVR
                     QRLGLAQTGLQTFDRRQQEAASSITERLSATVRSITLQHRRASRASLEVKMGGARVHQ
                     QIRDAIMALQIGDITRQRLEHVDAVLGVVAGTGPRPATENPALDPDQQTVFATLAHRL
                     QSAQLVDAARYFGREVRQVTQSLNSLAAEALALCSFGDTAYATEDRSGDSFIAQLEGQ
                     IGEALALFESFETAQAEVASATATVSDATAGLRHRLRTIQALDADIRIMGLNTTFKCT
                     RIGREGLALSIIAQELRGYANGFAKEAGTLMQEVETVAGISGMLTSGIAGDHAAVTSE
                     GTTAMRDSLTTLRQMGQMLDRAMQELKRDSNQVVTLLVETVSGLAVHAEIGKELRDSA
                     AQLAARAPAGAVNLAELPPLVVQMLEVIDRFYTMANERAVHDRFLERPARAESVAEAA
                     SGSEMEDFLF"
     gene            complement(2264..2884)
                     /locus_tag="VHX39_25540"
     CDS             complement(2264..2884)
                     /locus_tag="VHX39_25540"
                     /inference="COORDINATES: protein motif:HMM:NF015908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheD"
                     /protein_id="HEX3994552.1"
                     /translation="MTAPGGKSSKPAKPPSWGPMPWGAPPWGVPFAPPPLPEVQVSLM
                     QGDIHFTADSKVLVTVLGSCVAVCLWDKLRGIGGMNHFVLPTDRNGEKSTRYGDVAID
                     ELQAGLMRLGSRLPDLQAKVFGGAAVLPFGGGQTVGQNNVQLALERLRRDHIRITAQR
                     TGGTLGQQVRFHTRTGEAFVRYLAASARNKIVPGPRDRWSDDEIVT"
     gene            complement(2881..3975)
                     /locus_tag="VHX39_25545"
     CDS             complement(2881..3975)
                     /locus_tag="VHX39_25545"
                     /EC_number="3.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_function: GO:0050568 - protein-glutamine glutaminase
                     activity [Evidence IEA];
                     GO_process: GO:0006482 - protein demethylation [Evidence
                     IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0018277 - protein deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator protein-glutamate
                     methylesterase"
                     /protein_id="HEX3994553.1"
                     /translation="MKPRVRVLIVDDSASVRQTMSAILSADPEIEVIGTASDPFVAAR
                     RIQDEIPDVITLDVEMPRMDGITFLRKLMAQHPLPVVMCSSLTEDGSATLMQALEAGA
                     VDVILKPRTDVPQFLQEASIRICDSVKAAARARLKRTPALRVERTASPLVPQPKLTAD
                     VIMPPPVAGQAMVRTTETIVCIGASTGGTESLRVVLEALPVDCPGITIVQHMPEKFTE
                     AFARRLDSLCAMEVKEAADGDTVLRGRVLIAPGNRHMLLQRSGARYYVAVKDGQLVSR
                     HRPSVDVLFRSAARFAGSNALGIIMTGMGDDGARGLGEMKTAGAATIAQDEASSVVFG
                     MPKEAIARGAAGKIVSLDSLAGEIMRAGKR"
     gene            complement(3983..>4645)
                     /locus_tag="VHX39_25550"
     CDS             complement(3983..>4645)
                     /locus_tag="VHX39_25550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HEX3994554.1"
                     /translation="LFEKDGLATEAIHLIDVMTTNKTEFFREPDHFRFLAEQAVPRLL
                     SAAKSSSLKIWSAACSTGAEPYTLAMVLADLAQQNTGLHFGITATDISTEVLDVAVAG
                     IYPETMVAPVSPEFRHRYVLRSRDRSRRLVRMAPELRAAVRFARINLMEVPYQVERDM
                     DIIFCRNILIYFDKETQQAVLQHLCEHLRLGGFLFLGHSETLAGFHLPVEPVGPTVFR
                     RR"
BASE COUNT          914 a         1438 c         1417 g          876 t
ORIGIN      
        1 tgaaccatca tcggatgatc catgaacctg gcgttggtca gcgcattcgg cgtttccgag
       61 gcgtcgaact ttccctggct cggctaacac tgcggcaaag aacgtacggt ccgcaggaca
      121 ttgcgtcggc ggcgcataag attcgtccag cgagtcccgc agaacaaagt ccccgagcaa
      181 gtatttctta atcatttccc gtcaacctgg cggcctgggc gttcagcttg ttgatgcatg
      241 gacttcgaat aagattgtat aagccattct gcaaactatc tgaccctgct ccgacctctg
      301 gttcggtcag ggagtctatt aacggtaact atactggtgg gtgcaaccct gactgcttcc
      361 ggtcggccac tttgtctgat gtttgaggga gctgcccggt gagccaacca ggtgatttcg
      421 ccaacgcggc cgaagcaatc cgatcggcct ccgcgttaat cgaggtcaca ttcctgcgcg
      481 tcggccaaac actcgaagct tcgagtggca tcctcgagga tctgacatgc cgtttcgccg
      541 ctgtgctgca ggagttggcg ggcgacaaac ccggtcaggc gttgcaggct ctgctaaaga
      601 tggccgacca ggtcatcgat cttggcaaaa gccgatccag ggagaatatc cggttcgagc
      661 agatgcgcag ccttatcgaa tcggtcacca accgcatcgc acaaatgaag gtatcgttga
      721 aagacatcga ggcactggcg gtgaattcga aaattgccgc cgccgttatt cgtgcgccgg
      781 gcaccgactt cacaagtttt gccgacgaaa tcggacgtac gctgaggctg acgcggacca
      841 ccctcgatca gtttggcgcc gaactgcacc tcgtgcgcca acgtctcggc ctggcgcaaa
      901 ccgggttgca aactttcgac cggcgtcaac aggaagccgc cagctcgatc accgagcggc
      961 tgtcggcgac cgtaaggtct atcacattac agcaccggcg cgcctctcgc gccagcctgg
     1021 aagtcaaaat gggtggggct cgcgttcacc agcaaattcg tgacgcaatc atggcgttgc
     1081 aaattggcga tatcacccga cagcgtctgg aacacgtcga tgctgtactg ggcgtggttg
     1141 ccggaacggg tccgcgcccg gcaacggaga atcccgcgct cgaccccgac caacaaactg
     1201 tgttcgccac gctggctcac cggctgcaat cggcgcagct ggttgacgcc gcgcggtact
     1261 tcggccgcga agtccgccag gtgacccaat cgcttaatag ccttgctgct gaagccctgg
     1321 cgttgtgcag tttcggagac accgcctatg ccaccgagga tcgcagtggc gacagtttta
     1381 tcgcgcaact cgaaggccag atcggcgaag cgctcgccct gttcgagagc ttcgaaactg
     1441 cgcaagctga ggtcgccagc gctacggcaa ctgtctccga tgcgacagcc ggtctgcgtc
     1501 atcggcttcg gacgatccag gcactcgatg ccgatatccg catcatgggt ctcaacacga
     1561 cgttcaaatg cacacgcatc gggcgggaag gcctcgcgtt gagcattatc gcccaggaat
     1621 tgcggggtta tgcgaatggg tttgccaagg aggcagggac gctgatgcag gaggtcgaga
     1681 cggtggccgg catcagtggt atgttgacca gcggaattgc cggcgaccat gccgccgtga
     1741 cgtccgaggg aaccacggcg atgcgggatt cgctgaccac tctgcggcag atgggccaaa
     1801 tgttggatcg cgcgatgcag gagcttaagc gagacagcaa ccaggtggtg acgttgctgg
     1861 tcgagacggt gtcggggctc gcagtgcatg ccgagattgg taaggagttg cgcgattccg
     1921 cggcccaact ggctgcacgg gctccggccg gcgcggtcaa tctcgccgaa ttgccgccac
     1981 tggtcgtgca aatgctggag gtgatcgacc gcttctatac catggccaat gaacgtgccg
     2041 tgcatgaccg tttcctcgaa cggccggctc gcgctgaatc tgttgctgag gcagcgtccg
     2101 gctccgagat ggaagacttt ctgttttagc gtcaatccgc gcaggttgcg tcattgcctg
     2161 tcgctgtcgt tgcgaccgaa gcgaagcagg cgctacgcca ttccagacgt agtttgcttc
     2221 ccttcgctcg aatgacagga aaacgaacca gctcccccgc gcatcaggta acgatttcat
     2281 cgtcggacca ccggtcacgt ggacctggaa cgattttatt tcgggcgctc gcggcaagat
     2341 agcgcacgaa cgcttccccg gtccgggtat ggaatctgac ctgctggcca agcgtgccgc
     2401 cggtgcgttg cgcggtgatc cggatgtgat cgcggcgaag tcgttccaac gccaactgca
     2461 cgttgttctg tccaacggtc tgaccgccgc caaacggcag caccgcagcg ccgccgaaca
     2521 ctttcgcctg aaggtctggc aaccgggagc ccaatcgcat cagaccggct tgcaattcat
     2581 cgatcgcgac gtcaccgtaa cgtgtgcttt tttcgccgtt gcgatcagtc ggcagcacga
     2641 aatggttcat gccgccgatg cctcgcaact tgtcccaaag gcacaccgcc acgcaggagc
     2701 cgaggacggt caccagcact ttcgagtccg cagtgaaatg gatgtcgccc tgcatcaggg
     2761 aaacctgcac ctcgggcagg ggcggcggag cgaacggcac gccccacggt ggcgcgcccc
     2821 atggcatcgg cccccaggac ggtggtttcg ccggtttcga ggatttgccc cctggcgctg
     2881 tcatcgtttg ccggcccgca tgatctcgcc cgcgagcgaa tccagcgaca cgatcttgcc
     2941 tgcagcccct cgcgcaatcg cctccttcgg cataccgaaa accaccgagc tcgcctcatc
     3001 ctgggcgatc gttgcggcgc ccgcggtttt catttcgccg aggccacgcg caccatcatc
     3061 gcccatgccg gtcatgatga tgccaagcgc attggagccg gcaaatcgcg ccgccgagcg
     3121 aaacagcacg tccacagacg ggcgatgccg cgataccaac tggccgtcct tgaccgccac
     3181 ataataccgt gcgccgctgc gttgcagcag catgtgccgg ttgcctggcg caatcagtac
     3241 tcgcccacgc agcacggtgt cgccgtccgc cgcttccttc acttccatgg cgcaaagact
     3301 gtcgaggcgg cgagcaaatg cctcggtgaa tttctccggc atgtgctgga cgatggttat
     3361 gccggggcaa tccaccggca aagcctccag caccacccgc aacgattcgg ttccaccggt
     3421 tgatgcgccg atgcagacga tggtttccgt ggtgcgcacc atagcctgac cggcgaccgg
     3481 cggcggcatg atcacatccg ccgtgagttt cggttgtggg acgagcggcg aggcggtgcg
     3541 ctccacccga agcgcaggtg tgcgtttcag tcgcgctcgc gccgccgcct tcaccgagtc
     3601 gcagatgcgg atgctggctt cttgcaggaa ctgcggaacg tcagtccgcg gcttcaggat
     3661 gacatcgacc gcccctgcct cgagcgcctg catcagggtc gccgacccat cctcggtgag
     3721 cgaggaacac atcacgaccg gcaacggatg ctgcgccatc agtttgcgca ggaaggtgat
     3781 gccgtccatg cgcggcatct cgacatcgag agtgatgacg tcggggattt catcctggat
     3841 gcgacgcgcc gcaacgaacg gatcggaggc ggtgccgatg acctcgatct cgggatcggc
     3901 ggagaggatc gccgacatgg tctgccggac cgaggcagag tcgtcgacga tcagcacgcg
     3961 gacccggggt ttcatcgcag cactatcgcc gccggaacac ggtcgggccc accggttcca
     4021 ccggcaaatg gaacccggcc agcgtttccg agtggcccag aaacaagaac ccgccgagac
     4081 gcagatgttc gcacaggtgt tgcagcaccg cctgctgcgt ttccttgtcg aaatagatca
     4141 gaatgttgcg gcagaaaatg atgtccatgt cgcgctcgac ctgatacggc acctccatca
     4201 ggttgatccg ggcgaaccgc accgcggcac gcagttccgg cgccatccgc accagccggc
     4261 gggaccgatc ccgcgagcgc agaacataac ggtgacggaa ctcaggcgac accggtgcca
     4321 ccatagtttc cggataaatg ccggcgacgg cgacatcgag cacttcggtg ctgatgtcgg
     4381 tggcagtgat gccgaagtga aggccggtat tctgctgcgc cagatcggcc agcaccatcg
     4441 ccagcgtgta cggctcggcg ccggtcgagc aggcggcgct ccaaatcttc aatgacgagc
     4501 ttttcgcggc ggacagcaga cgcggcacag cctgttcggc aaggaaacgg aaatgatcgg
     4561 gttctcggaa gaactcggtc ttgttcgtgg tcatcacgtc gatgaggtgg atggcctcgg
     4621 tggcgagccc atccttttcg aagag
//
LOCUS       DATAVD010001335         2094 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2550153, whole genome shotgun sequence.
ACCESSION   DATAVD010001335 DATAVD010000000
VERSION     DATAVD010001335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2094)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2094)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2094
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2550153"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            378..1064
                     /locus_tag="VHX39_25555"
     CDS             378..1064
                     /locus_tag="VHX39_25555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994555.1"
                     /translation="MQAPSEFGFEQLITELLRGLADAIADRPGETEAQRFARHQTAIF
                     SVMAFMPRDAIETMVAGQCVMFDHLMRDAARDLLRNEAEPVKRRIRTQLTGLGRSFLK
                     LLTEFRRLQSRTGQQTAASPHARPGPPADSAQKTLNTAAARPASAVSGPPTDTTEPIR
                     SAAAVDPAPDASQPQVAPPGDKADLLLQRGFQNRRMRRALQFKKPAGKLASRRSSGPA
                     ALPQPATSSG"
     gene            1660..>2094
                     /locus_tag="VHX39_25560"
     CDS             1660..>2094
                     /locus_tag="VHX39_25560"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3994556.1"
                     /translation="MDCRAATESILDSDKYYWHRYIETYRAAFATLGDVRRVIEFGVL
                     HGASIRWLAECFPYADIIGADLVPEQSDWPRDSRISYRQIDQADRIGVRSMLDAIAGD
                     VDLVIDDGSHIPQHQASCLAEGFARLRPKGLYILEDIATSHPM"
BASE COUNT          401 a          666 c          618 g          409 t
ORIGIN      
        1 tatctgattt atgccatgat attcgcactg tcgtccggga tatcgatcat tgcctggttc
       61 aacgtattcc gtggcaggcg tgatgcgcgg cagctaatgt gcgaaatcag gcaacggccg
      121 aacattccgt tgtctcatat cgtcgggcga tagcagcaat cgcccgacca gaacgcggac
      181 ttcgttgctt ccccgcgtcg tgtgatcgtt ccggcggctt ccggccacgc tgcggtgcag
      241 tggtgctgtc tcgttctgca ctgacaaaaa agccgccacc cccggccggc gcaaaaatgc
      301 ccggccgttt tcgtgttgac gcgatccggt gtgcggacaa taagcctgag gtcgaacaat
      361 gttcccaggc agcaatcatg caggcaccat ccgaattcgg cttcgagcag ctgatcaccg
      421 aactgctccg cggcctcgcc gacgccatcg ccgaccgtcc gggagagacc gaggcgcagc
      481 gatttgcccg gcaccagacg gcgatcttct ccgtcatggc gttcatgcca cgcgacgcga
      541 ttgagaccat ggtggccggc cagtgtgtca tgttcgatca cctgatgcgg gacgccgcgc
      601 gcgatctgct gcgcaacgag gccgagccgg tcaaacgccg gatccgcacg cagctcaccg
      661 ggcttgggag gtcgttccta aaacttttaa ccgaattccg ccggcttcaa tcccggaccg
      721 ggcaacaaac ggcggcctca ccccatgcca gaccgggccc gccagccgac tcagcccaga
      781 aaacgttgaa caccgcggcc gctcggccgg cttccgctgt ttccggaccg ccaaccgaca
      841 ctaccgagcc gatccggtcg gccgctgcgg tcgacccggc acccgacgca tcgcagccgc
      901 aagtggcgcc gccgggtgac aaggctgatc ttcttctgca acgcggtttc cagaaccggc
      961 gcatgcggcg ggcgctgcag ttcaagaagc ccgctggcaa gttggcttcg cggcgttcat
     1021 ccggtccggc ggctttgccc caacccgcca caagctccgg ttaggtttcg ttggatctcc
     1081 gtcaagaaat tcattcggta atggcagcac cgcctgccgg cgccgaacct ttgcccagag
     1141 ctctgccggc cgaccatcga taggctgccc gcatgccgga tcgtccgcgt gaaatttcgc
     1201 ttgcactggg ctcaatggat tgtctataaa tttagtctcg cgggatgcaa cattgtctcg
     1261 ccgattgtag aatcggtcaa tcagtcgaga gttatggcgt accgccgccc aggcgcggac
     1321 atcagctgaa tgacaggcgg atggatgcca ggcgaacact cgcaatccaa aaggaaacgt
     1381 cgaatgcgcc gattgatcac gttggttttg ctggcgatgg tcacagtgac cgtagccggc
     1441 tgcatcgttg agcccggccg tggaggcggc ggctggtgtt ggtggcatcc ctatcgctgt
     1501 cgctgacgcg gcaacttgcc gcgagcacac gtccaggaac gcgttagcgc ggttgcccga
     1561 cagattttca cagccgcaac cgccggtttc tcacgccatg gtccggaaat acagccataa
     1621 attgtattcc gggcgcgaag cccgcggggg gataccgcaa tggattgtcg tgcagccacc
     1681 gaaagtatcc ttgattccga caagtactat tggcaccgct atatcgagac ctaccgtgcg
     1741 gccttcgcga cgcttggcga cgtgcgccgg gttatcgaat tcggcgtgct acatggcgca
     1801 tcgatccgct ggttggcgga atgctttccc tacgccgaca tcatcggcgc cgacctcgtc
     1861 cccgagcaat ccgattggcc gcgggacagc aggataagct accggcaaat cgatcaggca
     1921 gaccggatcg gcgtcaggtc catgctcgat gccatcgccg gcgacgtcga tctggtgatc
     1981 gatgacggca gccatattcc gcagcaccag gcgtcatgtc tggccgaggg atttgctcgc
     2041 ttgcgtccca aaggtctcta cattctggag gacattgcca cgagccaccc aatg
//
LOCUS       DATAVD010001336         1939 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2734293, whole genome shotgun sequence.
ACCESSION   DATAVD010001336 DATAVD010000000
VERSION     DATAVD010001336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1939
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2734293"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(227..724)
                     /locus_tag="VHX39_25565"
     CDS             complement(227..724)
                     /locus_tag="VHX39_25565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994557.1"
                     /translation="MGRALKQLHIEHIPSYSPQARGRIERLWDTLQKRLPPLLRTNAI
                     TTMEAANRWLAEVYLEQHNARFAVVAAEEGTAFIPFVGELDNILCIEQERVAGLDNTA
                     RYDGRCLQIPPNRNRHHFAKSTIRVLEYWNGAIALFHGPREIARFHSDGTPNQGAKAK
                     KEFVA"
     gene            complement(709..1398)
                     /locus_tag="VHX39_25570"
     CDS             complement(709..1398)
                     /locus_tag="VHX39_25570"
                     /inference="COORDINATES: protein motif:HMM:NF024940.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3994558.1"
                     /translation="MARVLDAIVSHRAGRLSCVEAGELLGLSERHFRRLRDAYEDRGE
                     EGLVDRRRGRVSSSRVPEAEAEWLAEMFRTRYFDFTAKHFHEQVVGRPMTDGKLFHRF
                     YSCVKSVLQLRGLTTKAPRRGVHRRKRERRPLPGMMLFQDGSKHAWLGQGPDLDLIVT
                     MDDATSAITSIFLCEEEGTASSFRGLSETIRGHGLFSSFYTPTGAVTTSPRRRRARRS
                     TRRNRPRWDGR"
     gene            1597..>1939
                     /locus_tag="VHX39_25575"
     CDS             1597..>1939
                     /locus_tag="VHX39_25575"
                     /inference="COORDINATES: protein motif:HMM:NF014136.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3994559.1"
                     /translation="MSEKTVPSAICQVLRAGAPFVGKQGFSYAPAVSAESVRSSAIHM
                     QLLTIPPGGRAKAHKHEAHETAIYVLSGEGAMYYGERLENHLIAHPGEFLYIPANVPH
                     LPYNTSQTEPCV"
BASE COUNT          350 a          636 c          572 g          381 t
ORIGIN      
        1 aaaacgagcg gattgccggc gtcggtcgaa aaggccttca gccccgcgtg ccgaggcaac
       61 cagaatgtcg atagctttta tagatgtccg gtttaggtag ctcttcaaat gtccgattca
      121 ggactttctg cttttgcttc tgtcctacct gtgggcgggg tgggcaggtt cgggccgttt
      181 ggcgcgaagc tgtccacgcc gtccacaggc tcgccgcgaa gcggacttac gcgacaaact
      241 ctttcttggc cttcgcccct tggtttgggg tcccgtccga atggaagcgg gcgatctcgc
      301 gcggtccgtg gaacagggcg atggcgccgt tccagtattc gagcacccgg atggtgctct
      361 tggcgaaatg atgccggttg cggttgggtg gaatttgtag gcaacggccg tcgtagcggg
      421 cggtgttgtc caggccggcg acgcgctcct gctcgatgca caggatgttg tcgagttcgc
      481 ccacgaaggg aatgaaggcc gtgccttcct ccgcggcgac cacggcgaag cgggcgttgt
      541 gttgctcgag gtagacctcc gccagccagc gattggccgc ctccattgtc gtgatcgcgt
      601 tcgtcctcag cagcggaggc agacgcttct gcagcgtgtc ccagaggcgc tcgatccgcc
      661 ctcgcgcctg cgggctgtag gaggggatat gctcgatgtg cagttgcttc agcgcccgtc
      721 ccacctgggt cggttgcgtc ttgtcgacct tcgcgcccgc cgtcggcgtg gtgaagtagt
      781 gactgccccg gtcggtgtgt agaacgacga gaacagaccg tgtccgcgaa tcgtctccga
      841 caacccgcga aagctcgagg ccgtgccctc ctcctcgcac aggaaaatcg aggtgatcgc
      901 actggtcgcg tcgtccatcg tcacaatcag atccagatcg ggtccctggc ccagccaggc
      961 gtgtttcgag ccgtcctgaa acagcatcat gcccggcagc ggacgccgct cgcgcttgcg
     1021 ccggtgcacc ccgcggcgag gcgccttggt cgtcagcccc cgcaattgca acacgctctt
     1081 cacgcagctg taaaagcgat ggaacaactt gccgtccgtc atcggccggc ccaccacctg
     1141 ctcgtggaag tgcttggccg tgaaatcgaa ataccgtgtc cgaaacatct ccgccaacca
     1201 ctccgcttct gcctcgggaa cgcgagacga actcacacgt cctcgccgcc ggtcgaccag
     1261 cccttcctcg ccccgatcct cgtaggcgtc ccgcaaccga cggaaatgtc gctcgctcaa
     1321 tcccagtagc tccccagcct caacgcaact cagtcgtccc gcacgatgcg agacgatcgc
     1381 atccaataca cgcgccatcc gaacctccgg caacatgtga tctcccggtt caaaaaccgg
     1441 acaaatcacg cgctacctaa tccggacata tcacttgctc ccggcacgac tgacgtccgt
     1501 ccttgccggc ggaccggttt tcgccgatgc tcgatcccac tccgccagcg acgcggcaaa
     1561 acggcttgcg cgcgcggcca tgatgggagt ttgaaaatgt cagagaagac agttccttcc
     1621 gccatttgcc aagtcttacg cgcaggcgcg ccctttgtcg gcaagcaggg cttttcctat
     1681 gccccggcgg tttccgccga gagtgtccgg tcgtcggcca tccatatgca attgctgacg
     1741 atccctcctg gcggtcgcgc caaggcgcac aagcacgaag cgcacgagac ggcgatatac
     1801 gtgctcagtg gcgaaggcgc gatgtattac ggcgagcggc tggagaacca tctcatcgcg
     1861 catccgggcg aatttctcta catcccggcc aacgtgccgc atctgccgta taatacgagc
     1921 cagaccgaac cttgcgtcg
//
LOCUS       DATAVD010001337         4475 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3666649, whole genome shotgun sequence.
ACCESSION   DATAVD010001337 DATAVD010000000
VERSION     DATAVD010001337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4475
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3666649"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..589
                     /locus_tag="VHX39_25580"
     CDS             <1..589
                     /locus_tag="VHX39_25580"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3994560.1"
                     /translation="GIDLERFATGLRKTSQVPWVIGTVAALRPEKNLGRLIRAFAMLV
                     REHPALTPRLVIIGDGPEREALSTLAVQQGIADLTSFTGHRDDTPSLYASLDLFALTS
                     DTEQMPLSLIEAMASGLPLVATDVGDVRTMVSSENERFLGARDDAAIAGLLAALLADP
                     DERVRLGAANRTKAERDFDQAVMFDAWRSLWLGAV"
     gene            586..1746
                     /locus_tag="VHX39_25585"
     CDS             586..1746
                     /locus_tag="VHX39_25585"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3994561.1"
                     /translation="MTGLAVMRQAAPERSDRLPSRNSANITVSAVQDLNTLETKWRDL
                     EARSNASFFQSWTWTGCMAEQRFANPELVEVRESGRTVALALFNRVGRTLYLGESGDA
                     ALDDVFIEFNGVLTEAGRETELTLACLQSARDARGKGFPHWRRHLVLSGIGADTLVAS
                     EQIGPVLRMRDRLAHFVDLSACADDFLRRRSANTRQQLRRSDRDYARSGDITIERAES
                     LAQGLEFLDRLAALHQASWQARGQPGAFANPAFTRFHRTLIARGLGRGEIDLLRIAAG
                     PQTVGYLYNFRYRGQSLAYQSGFDQASAGRHRKPGLTCHHKAIQFAAGWGATRYDFLA
                     GDDRYKRSLADRTESLHWIEVATPYSPRRLVHSLKGRVAGWRDAAVRRWHST"
     gene            1743..2882
                     /locus_tag="VHX39_25590"
     CDS             1743..2882
                     /locus_tag="VHX39_25590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994562.1"
                     /translation="MKLSLLSATSMVALAASAHAYVLVPVSVGPNLYDLVQDSDSTAS
                     TREPLTVATAALQATGGDRQDASFTGQVDQSAAAGTAFPLVPLGAARGTPPDDDFASR
                     FAGTWRWNAWQKAIGIGVARIAPLIGTIGNGALPGGKPGSTVLIAQSRQAGLNGRSAF
                     GDSQRSAAADVFAPSSTSTATMTVTGPANLRPRAGSGFSAAAANGAKPLPVTSEPTPA
                     AASYPYVPQTGPVVNGNLVTANFSDAVTASGATTWIYKPIIPTASQRGPGTVRPNSVP
                     PGDQVARLIDVTLPIGDQANATLADGTRAFLPASVSANPEATAARYLTSALNAGSAGL
                     AGQTIEAFAIGFGNGSRTPAGAATDPLWEKIMAGVGPLDNSLALP"
     gene            3067..3873
                     /locus_tag="VHX39_25595"
     CDS             3067..3873
                     /locus_tag="VHX39_25595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX3994563.1"
                     /translation="MTDPYAKYTRLRFDRPHPRVLRITMDNGKMNTADNALHGELGEI
                     WRDVDRDPSVNVAILTGAGTVFSAGGEFAMIQENIADFDARARQWREAKEIVYNLINC
                     SKPVVSAMRGVAVGAGLVCGVLADVSIATKTCRIIDGHTRLGVAAGDHAAIIWPLLCG
                     LAKAKYYLLLCEQVLGEEAERIGLISLAVEDADLDAKSVEVATKLAEGAQSAIRWTKY
                     ALNNWLRSMGPTFDASLALEFLGFTGPEVKEGVASHLAKRKPEFPSGSAV"
     gene            complement(3890..>4475)
                     /gene="pdeM"
                     /locus_tag="VHX39_25600"
     CDS             complement(3890..>4475)
                     /gene="pdeM"
                     /locus_tag="VHX39_25600"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR04123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     endonuclease PdeM"
                     /protein_id="HEX3994564.1"
                     /translation="SDLHLEKGSSHARKGNLLPPWDTHATLDRLGLLLRRWRPRIVVT
                     LGDSFHDPDGAGRLPKGELDRLNAMTEAHRFIWVLGNHDPHPPNGIGGQFVDEFVTHP
                     ILFRHEAVPRADAGEVVGHHHPKASIPARGGHVSRPCFVVDQRRLMMPAFGAYTGGLD
                     VHDTAIARLFPRGGRVFLLGRDRLFSFAIGQLSG"
BASE COUNT          832 a         1383 c         1439 g          821 t
ORIGIN      
        1 cggcatcgat ctggagcggt ttgcgaccgg gctgagaaag acctcacagg ttccgtgggt
       61 gatcggcacc gtcgccgcat tgcggccgga aaagaacctt ggacgcctga tcagggcttt
      121 cgcgatgctc gtgcgcgagc atccggccct gacgccacgc cttgtcatca tcggcgacgg
      181 gccggagcgg gaggcgctga gcaccctcgc cgttcaacaa ggcatcgccg atttaacgag
      241 cttcaccggc catcgcgacg acacgccatc gctttacgca agtctcgacc tgttcgcgct
      301 gacctctgac accgagcaaa tgccgctgtc gttgatcgag gcgatggcga gcggtttgcc
      361 cctcgttgcc accgatgtcg gcgacgtgcg gacgatggta tcgagcgaga acgagcgctt
      421 tctgggtgct cgcgacgatg ctgcaattgc gggattgctg gcagcgttgc tcgccgatcc
      481 agatgagcgc gttcgtcttg gcgccgccaa tcgcaccaag gcggaacgcg atttcgacca
      541 ggccgtcatg ttcgacgcct ggcgcagttt gtggctgggg gccgtatgac gggtcttgca
      601 gttatgcggc aagcggcgcc ggagcggtcc gacaggttgc cctcgcgcaa ttcggcgaac
      661 atcactgtgt cggcggttca ggacctgaac acgctggaga cgaagtggcg tgatctggaa
      721 gcgcgctcca acgcgtcgtt cttccaaagt tggacctgga ccggctgcat ggcggagcag
      781 cggttcgcca atccggagct ggtggaagtc cgcgaaagcg gccggaccgt cgcgctggcg
      841 ctgttcaatc gagtgggacg gacgctttac ctcggtgaaa gcggcgacgc ggcgctggac
      901 gacgtcttca ttgaattcaa cggcgtgctg accgaggccg gccgggaaac cgaattgacc
      961 ctggcgtgcc tgcaaagtgc ccgtgacgct cgtggcaaag gttttcccca ttggcggcgg
     1021 catttggtcc tgagcggtat cggcgccgac actctggtcg cgtcagagca aatcgggccg
     1081 gttctgcgga tgcgggaccg gcttgcgcat tttgtggatt tgtctgcttg tgccgacgac
     1141 ttcttgcggc gacgcagcgc aaataccaga caacaacttc gccgctcgga ccgcgactat
     1201 gcgaggtccg gcgacatcac gatcgaacgt gccgaaagtc tggcccaggg gctggaattt
     1261 ctggaccgat tggctgctct ccaccaggcg tcatggcagg cacgaggaca acccggcgcc
     1321 tttgccaatc cagccttcac ccgcttccat cgaacgctga tagcgcgtgg tctgggccgc
     1381 ggagaaatcg acctgttgcg tatcgcggcc ggtccgcaaa ccgtcggata tttgtataac
     1441 ttccgctatc gcgggcaatc gctcgcctat cagagcggct ttgatcaggc cagcgcaggc
     1501 cgccacagga agcctggtct gacctgtcat cacaaggcga tccagtttgc cgctggatgg
     1561 ggagcgaccc ggtatgactt tctggcgggc gacgatcgtt ataagcgtag cctcgcagat
     1621 cggaccgaga gcttgcactg gatcgaggtc gccaccccat attctccgcg ccgtctggtg
     1681 cacagcctga aagggcgcgt ggctggctgg cgggatgcgg ccgtccgtcg ctggcactcg
     1741 acgtgaagct ttcccttctt tccgcgacgt cgatggttgc cctggcggcc tctgctcacg
     1801 cttacgttct ggtcccggta tccgttggac ccaacctcta cgatcttgtg caggacagcg
     1861 acagcactgc atccaccagg gagccgctga ccgtcgctac ggctgcgttg caggccacgg
     1921 gaggcgaccg gcaggacgcg agcttcaccg ggcaggtcga tcagtctgcc gccgcgggta
     1981 ccgccttccc actggtgccg ttgggtgcgg ctcgaggtac gccgcccgac gatgattttg
     2041 cgtcccggtt tgctggaacc tggcgttgga atgcgtggca aaaagcgatc gggattggcg
     2101 tggcccgcat agctccgctg atcggcacga taggcaatgg agctttgccg ggcgggaagc
     2161 cgggcagcac ggtgttaatc gcacagagcc gccaggctgg cctcaatggc aggagtgcct
     2221 ttggcgacag ccagcgttcg gcagcagcgg acgtattcgc ccccagcagc acgagcaccg
     2281 cgacgatgac cgtcaccggg ccggcaaacc ttcgcccgcg ggccggaagc gggttctccg
     2341 ccgccgccgc caacggcgcg aagcctctgc cggtcacaag cgaacccacg ccggcagcgg
     2401 cgtcctatcc ctatgtaccg cagacgggtc ctgtcgtgaa cggcaatttg gtaacggcca
     2461 actttagcga tgcggtcacc gcctccgggg ccacgacgtg gatctataag ccgatcattc
     2521 cgaccgccag ccagcgcggc ccaggtacag tccggccaaa ttccgttcca cccggagacc
     2581 aggttgcgcg gctgatcgac gtgactttgc cgatcggcga ccaggccaac gcaaccctgg
     2641 cggacggaac gcgggcgttc cttcctgcct cggtcagcgc aaaccccgag gctaccgccg
     2701 cccgctatct cacgagtgcg ctcaacgccg gatcggccgg ccttgccggt caaacaatcg
     2761 aagcgtttgc gatcggcttt ggcaacgggt cccgtacccc ggccggagcg gccaccgacc
     2821 cgctgtggga gaagatcatg gccggcgttg gtcctttgga taattcactg gcactgcctt
     2881 agcgcgctgt tcgatccgat gcgcgcgccg gggttgagag caaggtccgg tcgtgacatt
     2941 gggacacacg gcatcaggcc ggattcggtc gcgcgtagga agtacgaccg tgcctgccgc
     3001 ttcgatcgga tgctgcaacc caggccggcg ggccaatcgg cgatcgccca actgcgaggc
     3061 aagttcatga ccgaccccta cgcaaaatac acccgcctgc gcttcgaccg cccgcatccg
     3121 cgcgtgctgc ggatcaccat ggataacggc aaaatgaaca ccgcggataa tgcgctgcat
     3181 ggtgagctcg gggagatctg gcgtgacgtg gaccgcgacc cctcggtcaa cgttgctatc
     3241 ctgactggtg ccggaactgt gttctcggct ggcggcgaat ttgccatgat ccaggagaat
     3301 attgcggatt ttgatgcccg agcgcggcaa tggcgggaag cgaaggagat cgtttacaac
     3361 ctgatcaatt gctccaagcc ggtggtcagt gcgatgcggg gtgtggctgt cggcgccgga
     3421 ctggtttgcg gcgttctggc ggacgtttcg atcgcgacca aaacctgccg tatcatcgac
     3481 ggacacacac ggctcggcgt tgcggcgggc gatcatgcag caatcatctg gccgttgtta
     3541 tgcggccttg caaaagccaa gtattatttg ctgctgtgcg agcaggtgct tggtgaggaa
     3601 gcggaacgca tcggcctgat cagcctcgct gtggaggacg ccgacctcga tgccaaatct
     3661 gtggaggtgg caacgaaact ggctgagggc gcccaatcgg ccattcgctg gaccaaatac
     3721 gccctgaaca actggctgcg gagcatgggt ccgacgttcg atgcgtcgtt ggcattggag
     3781 tttctgggct tcaccgggcc agaggtgaaa gagggcgtcg catcgcactt ggcaaagcgg
     3841 aagccggagt ttccttccgg ctcagcagtt tgatacgacg gcggatcggt tacccggaca
     3901 actgaccgat ggcaaaactg aacaaccgat cccgccccaa caggaacact cgcccgccac
     3961 gaggaaacag cctggcaatc gccgtatcgt gaacgtccag cccgccggta taggcgccga
     4021 acgccggcat catgagccgt cgctgatcga caacgaaaca cggccggctg acgtgaccgc
     4081 cgcgggcggg aattgaggct ttcgggtgat gatggccaac gacctcaccg gcgtcggcac
     4141 gcggcactgc ctcgtggcgg aacaagatcg gatgcgtgac aaattcatcg acgaactgcc
     4201 caccgatccc gtttggcggg tgcgggtcgt gattgccgag cacccagatg aagcgatgcg
     4261 cttcggtcat ggcattcagc cggtcaagct cacctttggg caaccgaccg gcaccgtccg
     4321 gatcatgaaa cgaatcaccc aaggtgacca caatcctcgg ccgccagcgg cgcagcagca
     4381 aaccaagccg atccaacgtt gcatgggtgt cccatggcgg cagcaaattg cctttgcgcg
     4441 cgtgcgaaga acccttttcc agatgcaggt cggag
//
LOCUS       DATAVD010001338         1525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_500252, whole genome shotgun sequence.
ACCESSION   DATAVD010001338 DATAVD010000000
VERSION     DATAVD010001338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_500252"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..265
                     /locus_tag="VHX39_25605"
     CDS             <1..265
                     /locus_tag="VHX39_25605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994565.1"
                     /translation="ILSMFVEDTDRLEWRSLRERLELEGEARQFMTNPEGRGVVAVTF
                     VSRLELFGIGEPDAAPDGELRFRNPGHPAAGATALAPAVMSSV"
     gene            complement(742..>1525)
                     /locus_tag="VHX39_25610"
     CDS             complement(742..>1525)
                     /locus_tag="VHX39_25610"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994566.1"
                     /translation="EAAGLVALSAASLILLIRQERRASNPLLPVNLFRQAGIWRTDTL
                     AAFVAAQTVSLVSFLPMYLQVVRGAGTAHSGLLLLPLTLGIATGSLFTGRVIAATGRT
                     AILPSIGLAVTATVLLSLAAFAPHFSNLTISLMLAVGSLCAGTAMPTVQMTVQVVAGP
                     RFLGAAAASVQFSRSVGASIGTALVGAVLFAVLAAQDPHTASMFTSIVERGPHALDAL
                     PAAQRLVVTAQIADAFRFAFLTIGCFTTTAMLFAWWLPVRRI"
BASE COUNT          303 a          487 c          499 g          236 t
ORIGIN      
        1 aattctgtcg atgttcgttg aagataccga ccgcctggaa tggcggagcc tgcgtgaacg
       61 actggagctt gaaggcgagg ctcggcagtt catgaccaac ccagaggggc gtggcgtggt
      121 ggcggtgacg ttcgtctcca ggctggaatt attcggcata ggcgagccgg acgcagcgcc
      181 cgacggcgaa ttgcgctttc gcaatcccgg gcatccggca gccggagcaa ccgccctggc
      241 gccggctgtg atgtcgagtg tttgatcacg cggggggcta gggaacagcg agacgccaac
      301 cgatcttcac gacagcgcct cggccccgcc atgtttggcg agtggtatcg aggtgtgcct
      361 gctggactag agaggtcagg atgtctgctg ctgaatatga tcgcaaattg gatgagctgg
      421 atcgcctgct gaatgacccg aacgtgccga tgcagccgga ccggatatgg tcgctgctgg
      481 ccgacgtttc gcgggtcgaa acccaatccg caatgatgcc tccgggcatg cgaactttgc
      541 cgctcggtcg gtctgaccgt cggagcgcct gaaacaagac gtccgtaatg ccaaccggcg
      601 gaaatgccga cgcttccgtc atgggtcaaa attcagagcg gttggtataa ggcctgagcc
      661 cgccacggtc cgcttcttcc ggaccgtggc gggcggtttc ttgcgggtgg cgtcacttcg
      721 cgcccatgga gaatgctccg atcatatccg ccgcactggc agccaccagg cgaacagcat
      781 ggcggtggtc gtgaagcacc cgatcgtcag gaacgcaaaa cggaacgcat cggcgatctg
      841 cgccgtcacc accagcctct gtgcggcggg taaagcgtcc aacgcgtgcg ggccccgctc
      901 cacaatgctg gtgaacatcg atgcggtatg agggtcctgc gccgccagca cggcgaacag
      961 caccgcaccg accagcgccg tgccaattga cgcaccgaca gaccgggaga actgcaccga
     1021 cgccgccgct gcgcccagga aacggggccc cgccacgacc tgcaccgtca tctgcaccgt
     1081 tggcatcgcc gtccccgcgc agagtgagcc aaccgccagc atcaggctga tcgtcaaatt
     1141 gctgaaatgc ggcgcgaagg cagccaaaga cagcagcacc gttgccgtca ccgccagccc
     1201 gatcgagggc agtatcgcgg tccgcccggt cgccgcgatc acccgcccgg taaacaacga
     1261 accggtggca atgcccagcg tcagcggcag cagcaacagg ccggaatgcg ccgtgccggc
     1321 gccgcgcacc acctgtagat acatcggcag gaacgacacc agcgacacgg tctgcgctgc
     1381 gacaaaggcg gccagagtgt cggtgcgcca gatgccggcc tggcggaaca ggttgaccgg
     1441 cagcagcggg ttggaagcac gcctctcctg ccggatcagc aggatgaggc tggcggcgga
     1501 cagggcgacc agccccgcag cctct
//
LOCUS       DATAVD010001339         2623 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1245314, whole genome shotgun sequence.
ACCESSION   DATAVD010001339 DATAVD010000000
VERSION     DATAVD010001339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2623
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1245314"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..376)
                     /locus_tag="VHX39_25615"
     CDS             complement(<1..376)
                     /locus_tag="VHX39_25615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994567.1"
                     /translation="MPTVKYRSVNPDLQPRRTRLAVPGWAGESEPRVDGSHEYPWHCI
                     PFSEAARAGIEVPYPYADELRVTMKDGILVFAGDFGDASDPDGRRPPFRSFGTQYYTY
                     QLLLDLKVEAGFAIKVETHPRFY"
     gene            complement(777..1046)
                     /locus_tag="VHX39_25620"
     CDS             complement(777..1046)
                     /locus_tag="VHX39_25620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014106103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0030527 - structural constituent of
                     chromatin [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEX3994568.1"
                     /translation="MSKAFISKVLQNSTEVTGAAANRATNDLIDAIVKEMKKSGKFTL
                     PSFGTFTVRKTKARKALNPRTGESIKVKAGKTVRFKASPVLKKAV"
     gene            complement(1234..1401)
                     /locus_tag="VHX39_25625"
     CDS             complement(1234..1401)
                     /locus_tag="VHX39_25625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994569.1"
                     /translation="MSTAEYCHKLDELDRLLNDPDVPMQPERIWSLLADVARHPTPHA
                     GRTGLAEAQQV"
     gene            complement(1513..>2623)
                     /locus_tag="VHX39_25630"
     CDS             complement(1513..>2623)
                     /locus_tag="VHX39_25630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994570.1"
                     /translation="ASGPRTGQAIRQRHGVELSLEKLRNNPGAKPSAAELLLGRIAAE
                     TARVAASLSTRGRDRLVEQLRTSLSGQNTLIPTFHLMRTAMLQRSRDFTVTFSGLEDA
                     TPHDLLLHRDRIEAEIACDVVTAEDGRGVHRGAWFRLADRIDPDLQTWLAAHPGRYLL
                     KMTLPLGLRGGLHDGEPDSDTLSQLHHRIRAMLETSARHDHDEAIVLRLDPLLLAGAQ
                     AEDIGLISSLRREFGPEAHLSVTTAGNGIFVMAARAGQENEVAVAIRRRLATLAPTRL
                     TGERPGILSVFVEDTDRLEWRGLRDRLELEGETRQFMTDPAGRPVVAISFVSRLELFG
                     IAEPDAAPGGELRFRNPRHPAAGFAALAPAVMSSV"
BASE COUNT          446 a          735 c          913 g          529 t
ORIGIN      
        1 tatagaagcg gggatgggtt tcgaccttga tggcaaaccc cgcctcgacc tttagatcca
       61 gaagtagctg gtaagtgtag tattgcgtcc caaagctgcg gaacgggggg cgccttccat
      121 ccggatcgga cgcatcgccg aaatcgcccg cgaaaaccag aatgccatct ttcatggtga
      181 cgcgaagttc gtcggcgtac ggatagggca cttcgattcc ggccctggcg gcctccgaga
      241 aaggaatgca atgccaggga tattcatgcg atccgtccac cctcggttcg gattcacccg
      301 cccagcctgg aaccgcgagc ctggtccggc gcggctgcag atcgggattg accgatcgat
      361 atttgactgt cggcatgcca atgctccttt cggttcattg ctgctgttgt ggggcgactt
      421 gtattccggc cggtgcggac gaaaagcccc tcgctgggca atttgactgg cggccatttg
      481 gtgtgcggcg gggaaattta cccgatcgcc acagcgtgga agataaaatc gccgttccct
      541 cgcgacaacg cgttgccccg gagagggtac ggtgcctgag ccatcaactc tgtcgtcggg
      601 ctgaatttta tagtctggct gaatttgcgg ggtctattgc acctgcaaca tacctatggc
      661 ctcggcgccg gtcccgattc gtcatgatcc ggcgtggggc cggaccatga cgtgattatg
      721 gaccgcgatg tcgatgctcg ctgatcctgt cagcgacaca tgatgggtcg gtggtttcag
      781 acggccttct tgaggaccgg agatgccttg aagcgaacgg ttttgccggc cttgaccttg
      841 atcgattccc cggtccgcgg attgagcgcc ttgcgggcct tggtcttgcg aaccgtgaac
      901 gttccgaagc tgggaagggt gaatttcccg gacttcttca tttccttgac gatggcatcg
      961 atcaggtcgt tggtggcacg atttgccgcc gcaccggtca cttcggtcga gttctgcagg
     1021 accttcgaaa taaacgcttt tgacatctac gttccttatt gcttcgagat caatcgatgc
     1081 gctgatccca ccaaggaacg ccttgtgcta ccgattcgca caattcgtca acaattttgg
     1141 acgtgacgaa atgaatctgt tggcgtgggc taaagggaat ttatccgacc gtgtcatttc
     1201 cgttgctagg ggctgggaca aatggcagcg cgatcatacc tgctgagcct ccgccaggcc
     1261 cgtccgtccg gcatgcggcg tcgggtggcg ggcgacgtcg gccagcaggg accagatacg
     1321 ttccggctgc atgggcacgt cgggatcgtt cagcaagcgg tcgagttcgt cgagtttatg
     1381 gcagtattcc gcggtggaca tgcaaacccc tcaagtgact gagcaaccgc attccgccat
     1441 caaatcgtgg cggtgccgtg gcttgatcat gaatatgagt tggcgccctg gcgtttcgta
     1501 tcgcccggcc gttcacactg acgacatcac cgccggcgcc agggcggcga agcctgcggc
     1561 gggatggcgg ggattgcgga agcgcaattc gccaccgggc gctgcgtcgg gttcggcgat
     1621 gccgaacagt tcgaggcggg agacgaagct gatcgccacc accggtcggc cggcggggtc
     1681 ggtcatgaac tgacgggtct cgccttccag ttccagacgg tcgcgcaggc cgcgccattc
     1741 caggcggtcg gtgtcctcga cgaagacgga caggatgccg gggcgctcgc cggtcaggcg
     1801 ggtgggggcg agggtggcga ggcgccggcg gatggcgacc gcgacctcat tctcctgccc
     1861 cgcccgggcg gccatcacga agatgccatt gccggcggtg gtgaccgaca gatgcgcctc
     1921 cgggccgaat tcccggcgga gggaggagat caggccgatg tcctcggcct gggcgccggc
     1981 cagcaacagg gggtcgaggc gcagcacgat cgcctcgtcg tgatcatgcc gagcggaggt
     2041 ttccagcatg gcacggatgc ggtggtgcag ttgggagagg gtgtcgctgt cgggctcgcc
     2101 gtcgtgcagg ccgccgcgga gaccgagcgg cagggtcatt ttgaggaggt agcggccggg
     2161 gtgggcggcg agccatgttt gcagatcggg atcgatccgg tcggcgagac ggaaccaggc
     2221 acctcgatgg acgccacggc cgtcctcggc ggtgacgacg tcgcaggcga tttcggcttc
     2281 gatgcggtcg cgatgcagca gcaggtcgtg aggtgtggcg tcttccaggc cggagaatgt
     2341 gacggtgaaa tcacgggatc gttgcagcat ggcggtgcgc atgaggtgaa aggtggggat
     2401 cagggtgttt tggccgctga ggctggtgcg gagttgttcg accaggcggt ctcggccccg
     2461 ggtgctgagg ctggcggcga cgcgggcggt ttcggcggcg atccggccca gcaacagttc
     2521 ggcggcggat ggtttggcac cggggttgtt gcgcagcttt tccaggctga gttcgacgcc
     2581 gtgacgctgg cggatcgcct ggccggtccg ggggccggag gcg
//
LOCUS       DATAVD010001340         2017 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1057192, whole genome shotgun sequence.
ACCESSION   DATAVD010001340 DATAVD010000000
VERSION     DATAVD010001340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2017
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1057192"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1339)
                     /locus_tag="VHX39_25635"
     CDS             complement(<1..1339)
                     /locus_tag="VHX39_25635"
                     /inference="COORDINATES: protein motif:HMM:NF012664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase S10"
                     /protein_id="HEX3994571.1"
                     /translation="MPIHDLHHERRLATQPFRKTVALPLAIVVAGLVCGQPATAQIRT
                     PPTVPHCAAAATERKPTKATPQDNDTAPPHAEPAEVWTDGSVTVGGTKIDYCAVASTL
                     VVHPKDWDDAAPSGDTPAKGDSDDSAKNPPTVASMFYVAYLKRNVEASARPITFLFNG
                     GPGSATVWLHMGAFGPRRVDTANAIHSAPAPYRLVNNDQSLLDASDLVFIDAPATGFS
                     RVSGPDKDRAFYGIDEDAHAFAVFITAFLSKYQRWNSPKYLFGESYGTTRAAVLVNLL
                     QSDPGVDFNGVIMLSQVLAADLYPDQPKTSPGNDLPYQLALPTFAATAWYHQQAADRR
                     ASPVPATLLSQVESFAMGDYAAALAAGAGLDQATRETVIAKLHEFTGLPEDYLRRDDL
                     RVSPDEFRQELLHDRGRIIGATDTRFEGPTLDRMSRKARYDPSDAAISSAYVSS"
     gene            1403..>2017
                     /locus_tag="VHX39_25640"
     CDS             1403..>2017
                     /locus_tag="VHX39_25640"
                     /inference="COORDINATES: protein motif:HMM:NF023222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3994572.1"
                     /translation="MPARTGAELLRGLKDDRQIWVGNDKVSDVVSHPAFSGAAKGLAA
                     VFDLQWEAPEDCLFPDPETAELINVSHMIPRSPADVQRRHRGLRRISEHTVGVMGRTP
                     DYMNVTYAGFAGCAHEWAEHGNEAGAERQVEYQKFLRRNDICLTHTLIHPTIDKAKDE
                     IPGLENDVILRKVCDTEHGIIVRGARILATLAPFADELAVYPARP"
BASE COUNT          396 a          615 c          618 g          388 t
ORIGIN      
        1 aactcgagac ataagccgaa ctgatggctg catcggacgg atcgtagcgt gccttgcggc
       61 tcattcgatc caacgtcggc ccctcgaacc gcgtatcggt cgcgccgata atccggccgc
      121 gatcgtgcag caattcctgc cggaattcgt cgggactgac ccggaggtcg tcgcgacgca
      181 aataatcctc gggcaggccg gtgaactcat gcagcttcgc gatgacagtc tcccgcgtgg
      241 cctgatccaa accggcgccg gccgccagcg ccgcagcgta atcgcccatt gcaaagcttt
      301 caacctggct cagcagagtt gccgggaccg gcgatgctcg ccgatccgcc gcctgctgat
      361 gataccatgc cgttgcggca aacgtcggca acgccaactg gtaaggcagg tcgttgccgg
      421 gcgaggtttt cggctggtcg ggatacagat cggcagcgag cacctgcgac aacatgatga
      481 cgccgttgaa gtcgacaccc gggtcgcttt gcaacaggtt caccagcacc gccgcgcgcg
      541 tggtgccata actttcaccg aacaaatatt tcggtgaatt ccagcgttgg tatttggaaa
      601 ggaacgccgt aatgaaaaca gcaaaggcat gcgcgtcctc gtcgatacca taaaacgctc
      661 tgtccttgtc cggtccggaa acccggctga acccggtggc cggcgcgtct ataaacacaa
      721 gatcgctcgc gtcgagcagg ctttgatcgt tgttcaccag tcgatacggt gccggtgccg
      781 aatgtatggc atttgcagta tcgacccgcc tcggtccgaa agcccccata tgcaaccaaa
      841 ccgtcgccga tcctgggcct ccattaaaca aaaaagtaat gggacgagcg gacgcttcga
      901 catttcgctt aaggtaagca acgtaaaaca tcgacgcgac ggtgggcgga tttttcgcgc
      961 tgtcatccga atcgcccttg gccggcgtat cacccgaggg tgctgcgtcg tcccagtctt
     1021 tcggatgcac aaccaacgtg ctcgccaccg cgcaatagtc gatcttcgtg ccgcctacgg
     1081 tgaccgagcc atcagtccag acctctgccg gttcggcgtg gggcggcgcg gtgtcattgt
     1141 cctgcggcgt cgctttcgtt ggcttgcgct cggtcgccgc cgccgcacaa tgcgggaccg
     1201 tcggcggtgt ccgtatttgg gccgtggcgg gctgcccgca taccaggccg gcaacgacga
     1261 tcgccaaagg caacgcaact gtcttgcgga acggctgggt ggccagccga cgttcgtggt
     1321 gcagatcgtg gatcggcatg gttcttcctg atcggagcgt ggtccgccag tatgccggca
     1381 tcgaggccac aggagaaagc cgatgccggc acgcacgggt gcagaacttc tgcgcggatt
     1441 gaaggacgat cgccagatct gggtcgggaa cgataaggtt tccgacgttg tctcgcaccc
     1501 ggcgttctcg ggcgccgcca aaggtctggc cgcggtgttc gacctgcaat gggaggcgcc
     1561 cgaggattgc ttgtttcccg atccggaaac cgccgagctg atcaatgtca gtcacatgat
     1621 cccgcgctcg cccgcggatg tgcaacggcg ccatcgcggc ctgcgacgta tctcggaaca
     1681 taccgtgggc gtcatggggc ggacgccgga ttatatgaat gtcacctatg ccgggttcgc
     1741 cggttgtgcg cacgagtggg cggagcatgg caacgaggca ggagcagagc gtcaggtcga
     1801 atatcagaaa ttcctccgcc gcaatgacat ttgcctgacc cacactttga tccacccgac
     1861 catcgacaaa gccaaggacg agattcctgg gcttgaaaat gacgtcatac tgcgaaaggt
     1921 gtgcgacacc gagcatggga tcatcgtgcg tggcgcgcgc atcctggcga cgttggcgcc
     1981 gtttgccgat gagctcgcgg tttatcccgc ccgcccg
//
LOCUS       DATAVD010001341         5512 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3104062, whole genome shotgun sequence.
ACCESSION   DATAVD010001341 DATAVD010000000
VERSION     DATAVD010001341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5512
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3104062"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            8..669
                     /locus_tag="VHX39_25645"
                     /pseudo
     CDS             8..669
                     /locus_tag="VHX39_25645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009819623.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS6 family transposase"
     gene            complement(751..1131)
                     /locus_tag="VHX39_25650"
     CDS             complement(751..1131)
                     /locus_tag="VHX39_25650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEX3994573.1"
                     /translation="MPVSGLPPYDDNNIFARILRAEIPSKKVYEDEWALAFHDINPQA
                     PVHVLIIPKGKYCSFADFSAQGSEAEIAGFMRAVGTVARQLGLEAPGYRLLANLGEHS
                     GQEVPHFHVHLFGGRPLGPMLKRD"
     gene            complement(1215..1601)
                     /locus_tag="VHX39_25655"
     CDS             complement(1215..1601)
                     /locus_tag="VHX39_25655"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HEX3994574.1"
                     /translation="MTFEIPRESGAGVLDRLWNVVMSRREADPTVSHSARLLSRGPAK
                     VAQKFGEEAVECLIEAVRGDHDAVIAESADVLYHLIVVWVSTGVAPEEVWAELMRREG
                     VSGLVEKASRAQAGLVARVLKTTKIP"
     gene            complement(1700..2470)
                     /gene="hisF"
                     /locus_tag="VHX39_25660"
     CDS             complement(1700..2470)
                     /gene="hisF"
                     /locus_tag="VHX39_25660"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEX3994575.1"
                     /translation="MLKLRVIPCLDVKDGRVVKGVNFLALRDAGDPVEQAAVYDAAGA
                     DELTFLDITASHENRDTILDVVSRTAARVFLPLTVGGGIRSTEDMRRLLLAGTDKCSI
                     NSAAVARPELVREAATKFGSQCVVVAIDAKQSAPGHWEVFTHGGRRPTGIDAIAWCQQ
                     VVSLGAGEILLTSMDRDGTGQGFDVDLLRSVCGAVRVPVIASGGVGTLQHFVEGARAG
                     ATGLLAASVFHFGTFTIAQVKQALAAAGLPVRLLPAAA"
     gene            complement(2591..3325)
                     /gene="hisA"
                     /locus_tag="VHX39_25665"
     CDS             complement(2591..3325)
                     /gene="hisA"
                     /locus_tag="VHX39_25665"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEX3994576.1"
                     /translation="MALTLYPAIDLKDGRCVRLRRGEMDQATIYADDPAAQAMAWRDA
                     GFRWLHVVDLNGAFAGRPVNAEAVTRILAAVDLPVQVGGGIRDMAGIERWLAAGVRRV
                     ILGSAAAKNPALVLEAGRTFPDRIVVGIDARDGHVATEGWAETSTMRAAELALRFEDA
                     GVAAIVYTDIGRDGMLSGLNLDQTIDLAAQLTTPVIASGGVGSLDDLAALRQAAVGTG
                     IEGVIVGRALYDGRVTAAAALALLNA"
     gene            complement(3384..3941)
                     /locus_tag="VHX39_25670"
     CDS             complement(3384..3941)
                     /locus_tag="VHX39_25670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3994577.1"
                     /translation="MSDRPSPHFLVEHVQELDDDDLAALCEATDAAIIEGGGFGWVNP
                     PGRRALESYYRGIVLVPERELLVARMDGIIVGSAHLVKPPRNNEAQAFAAHLMHSFVA
                     PYARGHGLARMLTEGVEARARELGYHVLNLDVRETQTAAIHMYESLGFEHWGTHPDYA
                     MVRGKVIQGFYYSKRLRQRKNQVSD"
     gene            complement(3946..4581)
                     /gene="hisH"
                     /locus_tag="VHX39_25675"
     CDS             complement(3946..4581)
                     /gene="hisH"
                     /locus_tag="VHX39_25675"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEX3994578.1"
                     /translation="MQVAVVDYGSGNLASASRGLVVAAERAGLAAKVNVTADPDMVAA
                     ADRIVLPGQGAFADCAHGLHAVSGMWEAIDRATSAGTPFLGICVGMQLMAGRGLEHTI
                     TPGYGWIEGDIAEMPAPGLRLPQIGWNVLDFEPGAHPLLEGLHPGDHAYFVHSYALVG
                     GNQSQTIATTDYGGPVVAFVAAGNRAGTQFHVEKSQEVGIRILTNFLLWAP"
     gene            complement(4604..4981)
                     /locus_tag="VHX39_25680"
     CDS             complement(4604..4981)
                     /locus_tag="VHX39_25680"
                     /inference="COORDINATES: protein motif:HMM:NF022400.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HEX3994579.1"
                     /translation="MKVWTAHEKPDASPVLVREGFSFGALFFGPIWLAAHRAWLPAGG
                     LLLLTLLILLLTHLPASIILVLGVALLTGFSGRDLVRWSVTQRGYLETTVVTGRNQYD
                     ARARLLEARPDLVERSMVAETAP"
     gene            complement(5077..>5512)
                     /locus_tag="VHX39_25685"
     CDS             complement(5077..>5512)
                     /locus_tag="VHX39_25685"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014105192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase"
                     /protein_id="HEX3994580.1"
                     /translation="TLRAKGDLHIDFHHTTEDVGIVLGQGFRKAIGDKRGISRFGHAL
                     IPMDETLAEAAVDISGRPFLVWNVAFAQPKIGEMDTELFEEFFRALAFNAMVTLHINQ
                     RAGHNAHHVAEACFKATARALRAACEIDPRAAGAIPSTKGSL"
BASE COUNT         1055 a         1839 c         1640 g          978 t
ORIGIN      
        1 cgccgagatc attggccatg ccgtctggct gtatcatgtg ttcagtctga gtctgcgtga
       61 tggcgagctt ctgttggccg aaaggtgcat catcgtctcc tatgagacgg tgcgacgatg
      121 gtgcaaggaa ttcgaccagg atttcgctga tcgtttgcgt caccgccggc cacgaccggg
      181 gacaagtggc accttgatga ggtgttcatc aggatccagg gcgtgcggca ctatctctgg
      241 cgagccgtcg atcaggatgg cgtcgtgctc gacatcctcg ttcagccgcg gcgcgatgcc
      301 aaagccgcaa agcgattctt cacacgtctg ttgaagggtc tccaatatgt accgcgcgta
      361 atcgtcactg ataagctgcg aagttacggc gtggctcgcc gccagttgct accaaaggta
      421 gagcatcgtc aaagccggta tctgaacaat cgggcggaaa actcacatcg gccaacccgg
      481 cgccgagaac gtcagatgca acgattcaaa tcgcctgcgc aggcccggcg ctttctctct
      541 gctcacgcat tcatacacgg tcatttccat ccacgacgac accgactggc ggccaccacc
      601 tatcgcgcga tccgggccga ggcctttgac gtctggcacc atgacacgtg ccccaaggtc
      661 gttgcgtgac cgacgcgccg tatccacaag tgacttcaag ccgtgcgatg ggagttaacg
      721 tgacaatgcc ctggtgtgag ataccgggaa tcagtcgcgc ttcagcattg gaccgagcgg
      781 ccggcctccg aacaggtgaa cgtggaaatg cggcacctcc tgcccggagt gctcgcccag
      841 attagccaac agccgatagc ccggcgcctc cagtcccaat tgccgcgcca cggtccccac
      901 cgcccgcatg aaccccgcta tctccgcctc gctgccctgg gcgctgaaat cggcgaacga
      961 gcaatatttt cctttcggaa tgatcagcac atgcaccggc gcctgcgggt tgatgtcgtg
     1021 gaacgccagc gcccactcgt cctcatagac tttcttcgac gggatttcag cgcgcaggat
     1081 gcgggcgaag atgttgttgt catcgtatgg cggcagacca ctgaccggca taacgtatct
     1141 ccccaaaatg gcgatgtctc acacggtctc atgcgtcagg gtcacgcccg gaagccacga
     1201 cccgcttagc acgttcaggg gattttggtg gttttcagca cccgcgcaac caggcccgcc
     1261 tgggcccgcg acgctttctc gacgagcccg ctgacccctt cgcggcgcat cagctcagcc
     1321 cagacttcct ctggtgctac gccggtggag acccaaacaa cgatcagatg atacagcacg
     1381 tcggcactct cggcgatcac cgcgtcgtgg tcgccacgca ccgcttcgat caggcactcg
     1441 accgcctctt cgccaaattt ctgcgccacc ttggccggcc cgcgtgacag cagccgggcg
     1501 gaatggctga cggttggatc ggcctcgcgc cggctcatca ccacgttcca cagccggtcg
     1561 agcacacccg caccactctc gcgcgggatc tcgaacgtca tggccggctt cgacttgcca
     1621 acggtcttgt tcttgacgac ggtcttgtgc ttgacgccgt tcttgcctgc ggccttgcgt
     1681 ttggtggtct tcgccatgct caggccgccg ccggcaacag acgtaccggc aatccggccg
     1741 cggccagcgc ctgcttgacc tgcgcgatcg tgaacgtgcc gaaatgaaac acactggccg
     1801 cgagcaaccc ggtcgcgccg gcacgggctc cctcgacgaa atgttgcagc gtgccgaccc
     1861 cgcccgaggc gatgaccggt acccgaaccg cgccgcacac cgagcgtaac aaatcgacat
     1921 cgaaaccttg tccggtgccg tcccggtcca tgctggtcaa caggatttca ccagcgccaa
     1981 gcgagacgac ctgctggcac caggcgatcg catcgatccc agtgggccgc cgcccaccat
     2041 gggtgaagac ctcccaatgg ccaggcgccg attgctttgc atcaattgca accacgacgc
     2101 attggctgcc gaacttggtc gccgcttccc gtaccaactc gggccgagcc acggcagccg
     2161 agttgatgct gcatttgtcg gtgccggcca gcagcagccg gcgcatatcc tcagtcgagc
     2221 gaatgccacc acctaccgtc agcggcaaaa agacgcgtgc tgcagtgcgg gatacaacgt
     2281 ccagtatagt gtcgcgattt tcatggctcg cagtaatgtc gagaaacgtc agttcgtcgg
     2341 cgccggctgc gtcataaacc gcggcctgct ccactggatc gcccgcgtcg cgcagagcga
     2401 gaaaattcac gcccttgacg acccggccat ccttcacgtc cagacaggga atcacccgaa
     2461 gtttcaacat atcgcgtctt ttagactcct acgttggcag gagttgcaag cgaatatcgc
     2521 tgggcagtga tgaccgtaac tctggaccgc tcaacaaatc atcaatttat cgggataaat
     2581 ggcgaagata tcaggcattc agcaaagcca gcgcggcggc ggctgtcaca cgtccgtcat
     2641 aaagcgcccg gccgacgatc accccctcga tcccggtccc cactgccgcc tgtcgcagtg
     2701 ccgccagatc gtcgagcgat ccgactccgc cggacgcgat caccggcgtc gtcagttgcg
     2761 ctgccagatc gattgtctgg tccaggttca gccccgacag catcccgtcg cgaccgatat
     2821 cggtatagac gatggcggcc acaccagcat cttcgaaccg cagtgcaagc tcggcagcgc
     2881 gcatcgtcga ggtctcggcc catccttcgg tggcgacatg gccgtctcgg gcatcgatcc
     2941 caacgacgat acgatcgggg aacgttctgc cggcctccag caccagcgcc ggatttttcg
     3001 ccgccgccga accgaggatg acccggcgca caccggctgc cagccagcgt tcgatcccag
     3061 ccatgtcacg gatgccgccg ccaacctgca ccggcagatc gacggcagcg agaatgcggg
     3121 tgaccgcctc agcgttgacc ggccgacccg cgaacgcacc gttgaggtcg acgacgtgca
     3181 gccagcggaa cccggcgtcg cgccacgcca tggcctgcgc cgccggatcg tcggcgtaaa
     3241 tcgtcgcctg atccatctcg ccgcggcgca accgaacaca tcggccgtct ttcaggtcga
     3301 tcgcgggata caatgtgaga gccattactc ggatgcccgg ttttcaagtg gccgtttcgg
     3361 gtcggccgcg gcacacggag ccatcaatcg gaaacctgat tcttacgctg acgcaatcgc
     3421 ttgctgtaat aaaacccttg gatgaccttg ccgcgcacca tggcgtagtc cggatgcgtg
     3481 ccccagtgct caaacccgag cgactcgtac atgtggatcg ccgccgtctg ggtttcgcgc
     3541 acatccaggt tcagcacgtg gtagccaagc tcgcgcgcac gggcctcgac accctcggtc
     3601 aacatgcgcg ccaggccgtg gccgcgtgca taaggcgcca caaacgaatg catcaggtgt
     3661 gccgcgaagg cctgcgcttc attgttgcgg ggcggcttca ccagatgcgc cgagccgacg
     3721 atgatcccgt ccatccgcgc gaccagcaac tcgcgctccg gcaccagaac tatgccgcgg
     3781 tagtaacttt cgagcgcgcg gcgtcccggc ggattgaccc agccgaagcc gcccccctcg
     3841 atgatcgcag catccgtcgc ctcgcacaaa gccgcgaggt cgtcgtcgtc cagttcctgg
     3901 acgtgctcta ccagaaagtg cggcgatggc cggtcggaca tgcggtcagg gagcccagag
     3961 caggaaattg gtcaggatcc gaatgccaac ctcctggctt ttttctacat ggaactgtgt
     4021 gccggcgcga ttgccggcgg cgacgaaggc gacaacgggc ccgccatagt cggtggtcgc
     4081 gatcgtctgt gactgattgc cccccaccaa ggcgtagcta tgcacgaaat aggcatgatc
     4141 tccaggatgt aaaccctcca gcagaggatg cgcacccggt tcgaagtcca aaacgttcca
     4201 gccgatttgc ggcagccgca ggccaggtgc cggcatctcg gcgatgtcgc cttcgatcca
     4261 gccgtatccc ggagtgatcg tgtgctccag cccgcgtccg gccatgagtt gcatgccaac
     4321 gcaaatgccg aggaacgggg tgccggcgct ggtagcccgg tcgatcgcct cccacatacc
     4381 tgacaccgca tgcaggccgt gcgcgcaatc ggcgaaggcg ccctggccgg gcagcacgat
     4441 ccggtccgcc gccgcaacca tgtccggatc ggcggtgaca ttgaccttgg ccgcgaggcc
     4501 ggcgcgctcc gctgcgacga ccagaccgcg cgacgccgag gccaggttgc cgctgccgta
     4561 atcgacgacg gcgacctgca tcataacctg gaaccctggg tggtcacggc gcagtctccg
     4621 ccaccattga gcgctccacc aggtccggcc gggcttccag caggcgggcg cgggcgtcgt
     4681 actggttccg gccggtgacc accgtggttt ccagatagcc gcgctgtgtc accgaccaac
     4741 gcaccaggtc ccggccggag aacccggtca acagggcgac ccccagtacg aggatgatgg
     4801 aagcggggag atgggtcagg agcaggatca ggagagttag cagaagcaat ccgccggccg
     4861 gtagccaggc gcgatgcgca gccagccaga tcggaccgaa gaacagcgcg ccgaaggaaa
     4921 acccctcacg gacgagcacc ggcgaggcat cgggcttttc atgcgcggtc cagaccttca
     4981 tggcgcgtcc gtggcgatca tcgaccgcgg gctctcggcg atcatgtcac aacgacccct
     5041 tggccttcat atcacagcga ccccttgggc ttcattttac agcgaccctt tggtcgacgg
     5101 aattgcaccc gccgcacgcg ggtcgatctc gcacgcggcg cgcaaggccc gtgcagtggc
     5161 tttgaagcag gcctcggcga cgtggtgggc gttgtggccc gcgcgttgat tgatgtgcag
     5221 cgtgaccatg gcgttgaacg ccaaggcccg aaaaaactcc tcgaacaatt cggtgtccat
     5281 ttcgccaatt ttcggctggg cgaacgcgac gttccacacc agaaatggac ggccggagat
     5341 atcgacggct gcctcggcca gcgtctcgtc catcgggatc agcgcatggc cgaaccgcga
     5401 tatcccgcgc ttgtcgccga tcgctttgcg gaacccctgg ccgaggacga tgccgacatc
     5461 ctcggtggtg tggtggaagt cgatgtgcaa atcgcccttg gcgcgcagcg tg
//
LOCUS       DATAVD010001342         2426 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3667137, whole genome shotgun sequence.
ACCESSION   DATAVD010001342 DATAVD010000000
VERSION     DATAVD010001342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2426
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3667137"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..528)
                     /locus_tag="VHX39_25690"
     CDS             complement(<1..528)
                     /locus_tag="VHX39_25690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HEX3994581.1"
                     /translation="MLVSIIFALLMASLVVLYVHDRRQTTHTILRNFPIIGYFRYFAE
                     TLGEYMRQYQYLPDWSERPFNRLERSWVYRSAKGVSNLRSFGSENVPPFIFRNAAFPI
                     LDEEKRPWAGKQIGISEGPGSCRTPYQAMSFFNISGMSYGALSHAAVSALSRGAKAAN
                     IWMATGEGGLAPFHLE"
     gene            complement(797..1075)
                     /locus_tag="VHX39_25695"
     CDS             complement(797..1075)
                     /locus_tag="VHX39_25695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994582.1"
                     /translation="MSDTSDGSTANPFTLVLRAAFVPDGEQPPPELAADFSPLKFRAT
                     LDRATGVITCENAGMTFDGDIQAEWHPDAEQDSTDSGQDDVASKATQG"
     gene            complement(1139..1882)
                     /locus_tag="VHX39_25700"
     CDS             complement(1139..1882)
                     /locus_tag="VHX39_25700"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003620355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEX3994583.1"
                     /translation="MAKPAQGTTAATQWDRDAALTSARILLEIDAIKFRPEEPFTFTS
                     GWKSPVYIDCRRIIYFPRARSKICDLAVEKINRHVGYETIEAVAGGETAGIPFAAWID
                     DRMAAPMAYVRKKPKGFGRQALIEGDVPEGKRTLLVEDLTTDGQSKIQFANALRDAGA
                     IVNHAFVVFFYGVFPGAFETLARMDIALHHLCTWWDVLEACKDRPSFSDTNLTEVRHF
                     LEDPVAWSAAHGGIASAEEAMARKAAADR"
     gene            1947..>2426
                     /locus_tag="VHX39_25705"
     CDS             1947..>2426
                     /locus_tag="VHX39_25705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HEX3994584.1"
                     /translation="MARTHRIAVLPGDGIGKETVPESLKVLDAASRKFGFGLELTHYD
                     WSCETYKATGSMMPADGLDQLAKSDSVLLGAVGWPGVPDHVSLWGLLIPIRRGFDQYV
                     NLRPCKLLPGVRTPLANRTEADIDFYVVRENTEGEYSSVGGRMFEGTDREFVSQQSVF
                     "
BASE COUNT          489 a          753 c          707 g          477 t
ORIGIN      
        1 ttccaggtga aacggcgcga gcccgccttc tccggtcgcc atccaaatgt tggccgcttt
       61 cgcaccgcgc gacagcgccg agacagccgc atggctcagc gcgccgtaac tcatgccgct
      121 gatgttgaag aaactcatcg cctggtaggg agtgcggcag gatccgggtc cttcagaaat
      181 gccgatttgt ttgccagccc agggacgttt ttcttcatcg agaatgggga atgcggcatt
      241 gcggaaaatg aagggaggca cattctcgct gccgaaactg cggagattgg acacgccctt
      301 ggccgagcga taaacccagg atcgttccag tcgattgaac gggcgttccg accagtcggg
      361 cagatactgg tattgccgca tgtattcgcc aagtgtctcg gcaaaatagc gaaaatagcc
      421 gataatggga aaattccgca aaatcgtatg agtggtctgc cggcggtcat gaacataaag
      481 cacgaccagg gacgccatca gcagcgcaaa gatgatcgag accagcatgc gaaaccctcc
      541 cgtggcgtgg ccgcctttta tctagtccgg ggccacgcac cttcattgac accggttagc
      601 ggtgttttgt tacggagaat atctcagacg ggtgacattg tcgttggtcg cgtggttatg
      661 cgtcgccgta gcgggccggg ccatctgagc ggcgcaggat ggctgtcctg gtgctattgt
      721 ctcgatattc gattgcgttc tcttaccgga ccacgtccgg ggttttgcgc cgaccccgcg
      781 tctactttca aggtccttat ccttgtgtcg ccttcgatgc gacgtcatcc tggcctgaat
      841 ccgtagaatc ctgctccgcg tccggatgcc attcggcctg aatgtcgcca tcaaaggtca
      901 tccccgcatt ctcgcaggtg atgaccccgg tcgccctatc aagtgttgcg cgaaacttca
      961 gcgggctgaa atcggcggca agttcgggcg gcggctgctc cccatccggc acaaacgccg
     1021 cacgcaacac caaggtgaac gggttagcgg tcgaaccatc ggacgtatcg gacaagcggc
     1081 gcactccaaa cccatcgctc cgctcttatg ccctcaacac gtcccgcgcc aacctgtttc
     1141 agcgatcggc tgccgccttg cgagccatcg cctcctcggc cgaggcaatg ccgccatggg
     1201 ccgccgacca ggcaaccgga tcctccagga agtggcgcac ctcggtcagg ttggtatccg
     1261 agaatgacgg ccgatccttg cacgcctcca gcacgtccca ccacgtgcac agatgatgca
     1321 aagcgatatc catccgcgcc agtgtttcaa acgcgccagg gaaaaccccg tagaaaaaca
     1381 ccacgaacgc atgattcaca atcgcgccgg cgtctcgcag ggcgttggca aactggattt
     1441 tggactgccc gtcggtggtc agatcctcga ccagcagggt gcgcttgccc tcgggcacgt
     1501 cgccttcgat cagcgcctgg cggccgaaac ccttgggttt tttacggaca taggccatcg
     1561 gcgcagccat ccgatcgtcg atccaggccg cgaacgggat cccggcggtc tcaccgcccg
     1621 ccaccgcctc gatcgtctcg taaccgacat gacggttgat cttctcaacc gcaaggtcgc
     1681 aaattttcga ccgagcgcgc ggaaagtaga tgatccgccg gcaatcgata tagaccggtg
     1741 atttccagcc tgaggtgaag gtgaacggtt cctccggccg gaacttgatc gcgtcgatct
     1801 ccagcagaat gcgcgccgag gtcagcgccg catccctgtc ccactgcgtc gcggcggtcg
     1861 ttccctgggc tggcttggcc atctgcgctc cgtcctttat ctgaaaaccg acaagataac
     1921 tgacaacgga aaaggaacct gtccagatgg cccgaacgca ccgcatcgcg gtcctgcccg
     1981 gcgacggcat cggcaaggaa accgtgcccg agagcctgaa agtgctcgac gcggcatcgc
     2041 gaaaattcgg cttcgggctg gaactgacgc attacgactg gtcgtgcgag acctataagg
     2101 caaccggctc gatgatgccc gccgacgggc tggaccaact ggcaaagtcc gattcagtgc
     2161 tgttgggtgc cgtgggctgg ccgggcgtgc cggatcacgt gtcgctgtgg ggcctgttga
     2221 tcccgatccg ccgaggcttc gatcaatacg taaaccttcg cccgtgcaaa ctactgcccg
     2281 gggtgcgcac gccgttggcc aaccgcaccg aagccgatat cgatttctat gtcgtccgcg
     2341 aaaacaccga aggcgagtat tcatccgttg gcggccgcat gttcgaaggc accgaccgcg
     2401 agttcgtgtc gcagcagagc gtgttt
//
LOCUS       DATAVD010001343         2057 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3289862, whole genome shotgun sequence.
ACCESSION   DATAVD010001343 DATAVD010000000
VERSION     DATAVD010001343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2057
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3289862"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1337)
                     /locus_tag="VHX39_25710"
     CDS             complement(<1..1337)
                     /locus_tag="VHX39_25710"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3994585.1"
                     /translation="MTNPPRQLKLGGFFSTPGNHLAGWRHPDAVPEVDMDFREYVNLA
                     QIAERACFDMVFFQDTVAVSGSRAMARGRRDLARLNRIVKLEPTALISALSAVTTHIG
                     LVATATATFNEPYNIARRFATMDHISGGRIGWNLVTSQIEDEGGNFGFDDHVDHALRY
                     ERAVEFYEVVAGLWDSWEEDAFRYDKAAGIYYDADKLHFLRHKGKFFDVRGPLNVSRT
                     PQGRPVVAQAGSSETGRELAARTADVVFTAQTELADARDFYADVKGRTARYGRSPDDV
                     KIMPGITPVIGRTQAEAREKYDFLQSMLPDDLALEALARLSGGLDLRQFPLDGPLPDL
                     PPTNSAKARQQLLVDLARRENMTLRQIARHASSANGHRVLVGTPEWIADEMQEWLVKD
                     AADGFNVICNYYPGPFDDFCRLVVPELQRRGIFRTQYEGTTLRDSLGLKVPRNR"
     gene            complement(1438..>2057)
                     /locus_tag="VHX39_25715"
     CDS             complement(1438..>2057)
                     /locus_tag="VHX39_25715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3994586.1"
                     /translation="VFTAQVTVADGQAICIDLRDRAERYGRGRNDIKILPGLMPIVGR
                     SDAEAAEQFQQLQELIDDSLAIRALARLTGDLDIYQFPLDGPLPELPPSNAAKARQAL
                     IVELAREKNLTIRQVARYLGTSQGHRVLHGSAKTIADLMEEWLLAGACDGFNLLFPYF
                     PGPLNDFVDLVVPELQRRGIFRTEYEGRTLRQNLGVPVPANRYAN"
BASE COUNT          412 a          667 c          588 g          390 t
ORIGIN      
        1 cgattgcgcg gtaccttcag gccgagactg tcgcgcaagg tcgtgccttc atactgggtg
       61 cgaaagatcc cacgacgttg caactccggc accaccaacc ggcaaaaatc gtcgaatggt
      121 ccgggatagt agttgcaaat gacgttgaag ccgtcggcgg catccttgac cagccattcc
      181 tgcatttcgt cggcgatcca ctcgggggtt ccgacaagca cccgatgacc attggcggag
      241 gaggcatggc gcgcaatttg ccgcagtgtc atgttctccc gccgcgccag atcgaccagc
      301 aattgctgcc gcgctttggc cgagttggtt ggcggcaaat cgggcaacgg tccgtccagc
      361 gggaattggc gaagatcgag cccgccactc agccgggcga gcgcctccag cgccagatca
      421 tccggcagca tcgactgcag aaaatcgtac ttttcgcgcg cctcggcctg cgtgcggccg
      481 atcaccggcg taatgcccgg catgatcttc acatcgtcgg gggatcgccc ataacgcgcc
      541 gtccggccct tcacgtcggc gtagaaatcc cgtgcatcgg caagttcggt ctgtgcagtg
      601 aacaccacat ccgccgtcct tgccgccaac tcccttccag tttccgacga tcccgcctgg
      661 gcgaccaccg gcctgccctg tggtgtgcga gatacgttca acggccctcg cacatcgaag
      721 aacttgcctt tgtggcgcaa gaaatgcagc ttgtcggcgt cgtaataaat tcccgcggcc
      781 ttgtcgtaac gaaacgcatc ctcctcccaa ctgtcccaaa gcccggcaac gacttcgtaa
      841 aattccaccg cgcgttcgta ccgcagagcg tgatcgacgt gatcgtcgaa accgaaattg
      901 ccgccttcat cttcgatctg ggaggtcacg aggttccagc cgatccgccc gccgctgata
      961 tgatccatcg tcgcaaagcg ccgggcaatg ttgtacggct cgttgaacgt tgcggtggca
     1021 gtggcgacca ggccaatatg cgttgtcaca gcggacagcg cggaaatcag tgccgtcggc
     1081 tccagcttca cgatccggtt gagccttgcg aggtcgcgcc ggccacgcgc catggctcgg
     1141 ctgcctgaca cagccacggt gtcctggaaa aacaccatat cgaaacaagc gcgctcggcg
     1201 atctgcgcca gattcacata ttcgcgaaaa tccatgtcca cttcgggcac cgcatcggga
     1261 tgccgccaac cggccagatg attaccgggc gtgctgaaga aaccgcccag tttaagttgg
     1321 cgtggtgggt tggtcatgga tggttccgga ggctagacgt cgacatgaca ggcaacgtgg
     1381 tgaccgcagg tgacggaacg catgaccggc cggcaagttg gatgcatcac agaatcctca
     1441 attcgcgtat cgattggcag gtaccgggac gccgaggttt tgccgcaatg tgcgtccctc
     1501 atactcggtc cggaaaatgc cgcgccgctg taattccggt accaccagat cgacaaagtc
     1561 gttgagcggc cccgggaaat acggaaacag cagattgaac ccgtcgcagg cgccggccag
     1621 cagccattcc tccatcaaat cggcaatggt cttcgccgac ccgtgcaaca cccgatggcc
     1681 ctgcgaggtc cctaaatacc gcgcgacctg ccggatcgtc aggttcttct cccgcgccag
     1741 ctccacaatc agcgcctgcc gagccttcgc cgcattactg ggcggcagct caggcagcgg
     1801 tccgtccagc gggaactggt agatgtccag atcaccggtc agccgcgcca gcgccctgat
     1861 cgccagcgag tcgtcgatca gttcctgcaa ttgctgaaat tgctccgctg cctcggcatc
     1921 gctgcggcca acgatcggca tcaggccagg caggattttg atgtcgttcc ggccgcgccc
     1981 gtaacgttcg gcacgatcgc gcaaatcgat gcaaattgcc tgaccgtccg ccaccgtcac
     2041 ctgtgccgtg aacacca
//
LOCUS       DATAVD010001344         5295 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1057717, whole genome shotgun sequence.
ACCESSION   DATAVD010001344 DATAVD010000000
VERSION     DATAVD010001344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5295
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1057717"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1058
                     /locus_tag="VHX39_25720"
     CDS             <1..1058
                     /locus_tag="VHX39_25720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEX3994587.1"
                     /translation="ERVPVDEAEAGDIIAVAGLSDATIPDTIGAPDLAAALPAIPVDP
                     PTLAMTFRINDGPLAGREGKKVTSRQIRERLFREAEGNVAIKVSESNETEAFEVAGRG
                     ELQLGVLIEQMRREGFELTIGRPRVLTRRNEATGDREEPMEEVLVDVDEPYAGVVVEK
                     LSRRKGEMRDMRPSGGGKVRLTFMIPTRGLIGYHGEFLTDTRGTGIMNRLFAGYGPWK
                     GPIEGRRAGALISTEPGEAVHYALFYIQERGILFVSPGDKVYQGMILGETARDNDLEV
                     NPIKEKKLTNIRAAGKDDAMLLIPPRKMSLEQAIAYVEDDELVEVTPAAIRLRKRFLD
                     PNQRKRNERRLDTEAVA"
     gene            complement(1065..1712)
                     /gene="nth"
                     /locus_tag="VHX39_25725"
     CDS             complement(1065..1712)
                     /gene="nth"
                     /locus_tag="VHX39_25725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEX3994588.1"
                     /translation="MTRAAVRSFIEAIAATNPEPESELEFNTPFTLLVAVVLSAQATD
                     VSVNRVTQTLFADAPTPEAMVRLGVDGVARHIRSIGLWQGKARNVVELSRQLLATHGG
                     EVPADREALEALPGVGRKTANVVLNVAFKQDTMAVDTHIFRLGNRTGIAPGTSPRAVE
                     DGLVKRIPSELLRHAHHWLILHGRYVCKARKPECWRCVAAAWCLYRDKTPAPADT"
     gene            complement(1936..3429)
                     /locus_tag="VHX39_25730"
     CDS             complement(1936..3429)
                     /locus_tag="VHX39_25730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX3994589.1"
                     /translation="MVEPCDLTAVAARLLIGAKRLAPSELLASCIARIESVDHAVNAI
                     PARDFERARAAARRADAAVARGEDLPSLHGLPIGIKDLQETKDLVTTRGSVIYKDYIP
                     AEDDAIVAAVRRSGAIVLGKTNTPEFGAGANTRNAVYGATGNPFDPEKTAAGSSGGSA
                     VALATGMVPICTGSDTGGSLRNPAAFSGIVGFRPSPGLVPSDKRPIGWSNLPVLGPMA
                     RTVADTCLLLGAIASDDVRDPLAYSVHGRVMRHAAEFYPPATIDLSRLRVALTPDFGF
                     APTERHVAAVFAEKCSLFQHVFAQTEVTEPDCSGTDEAFEILRSLAFLATQADNVRDR
                     PGEVGPNVHANVAEGQRYGAAEVARALNLQTTIYRRWQTFFERYDVILTPSITISPRS
                     WRELYPAEIDGKPTRTYFHWLALAYAVTLPGHPAVSLPVGLDRNGMPFGLQIVGPRGG
                     DALVLAVAHALETLLDGDVRTARPVPNISTLRAARPIREMEGFLGFD"
     gene            3664..4626
                     /locus_tag="VHX39_25735"
     CDS             3664..4626
                     /locus_tag="VHX39_25735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate desuccinylase/aspartoacylase
                     family protein"
                     /protein_id="HEX3994590.1"
                     /translation="MRQNLSQADAPRFDVLINPPDLTPWLAGDGGIPGVITRESGRPG
                     PHVALLSLTHGNEFAGAIVLDRLLRNDLMPVRGTLSFAFVNLAAFAKFDPRTPTWSRF
                     IDEDINRLWEEPVLASPRHSVELDRARELRPLIDRADVILDLHSMLWPSDPLILCGPT
                     ARGRALGQGMGWPPLVVADTGHANGPRLIDYVRFAGTNATAVLVEAGQHWRPETVETT
                     TASVSGLLWHLGLVDEETNLPPLQPKLPSRFALVTDVVTARSSSFAFVRAWYGGEVVP
                     ARNTVIAVDGSTEIRTPYDDCLLVMPSLRPGRGHTAVRLAKFVN"
     gene            complement(4797..>5295)
                     /locus_tag="VHX39_25740"
     CDS             complement(4797..>5295)
                     /locus_tag="VHX39_25740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994591.1"
                     /translation="HRPRAARYARGRYSAEGYYYEARDLAAVVALLLAPLGPGGDRQY
                     RTASFDLDADQPIEQAPQTAAEDAILMVDGTFLQRPELQYHWDVTVFVRTSAEIAEAR
                     GLSRDIEHLGGEAAARNLYAKRYRPAYALYEQLCDPERNSDAIIDNDDLIHAQLHLRP
                     KGRLA"
BASE COUNT          950 a         1665 c         1724 g          956 t
ORIGIN      
        1 tggagcgcgt gccggtcgac gaggctgaag ccggcgacat catcgcggtt gccggactgt
       61 cggacgccac catccccgac acgattggcg cccccgacct ggcggcggcg ctgccggcga
      121 tcccggtcga tccgccaacc ctggcgatga cgttccggat caacgacggt cctttggccg
      181 gccgtgaggg caagaaggta acctcccggc aaatccgcga acggctattc cgtgaggccg
      241 agggcaacgt tgccatcaag gtctccgagt caaacgagac cgaggcgttc gaagtggccg
      301 gccgcggcga actgcaactc ggcgtgctga tcgaacagat gcggcgcgag ggcttcgagc
      361 tgaccattgg ccggcctcgc gtgctgacgc ggcgcaatga ggcaaccggc gaccgcgagg
      421 agccgatgga agaggtgctg gtcgatgtcg acgagcctta tgccggcgtg gtcgtggaga
      481 aactcagccg ccgcaaaggc gagatgcgcg acatgcgccc ttccggcggt ggcaaggtcc
      541 ggctgacctt catgatcccg acccgcggcc tgatcggcta tcatggcgag ttcctgaccg
      601 acacgcgcgg cactggcatc atgaaccggt tgttcgccgg ctatggtccc tggaagggcc
      661 caatcgaggg ccgccgagcc ggtgcgctga tctccaccga gcccggcgag gcggtgcatt
      721 atgcgctgtt ctacattcag gagcgcggca tcctgttcgt ttcgcccggc gacaaagttt
      781 accagggcat gatcctgggc gagaccgcgc gcgacaacga tctggaagtg aacccgatca
      841 aggaaaagaa gctgaccaac atccgtgccg cgggcaagga tgatgcgatg ttgctgatcc
      901 cgcctcggaa gatgagcctc gagcaggcga ttgcatatgt cgaggatgat gagctggtgg
      961 aagtgacgcc tgccgcgatc cggttgcgga agcggttcct cgatccgaat cagcggaagc
     1021 gcaacgagcg gcgattggac acggaagcgg tagcgtaagg ccgattacgt gtccgccggc
     1081 gccggggtct tatcccggta caggcaccac gccgccgcca cacaacgcca gcattccggc
     1141 ttgcgggcct tgcatacata gcgtccgtgc agaatgagcc aatgatgcgc atggcgtagc
     1201 aattcggacg gaatgcgttt caccaaccca tcctcgaccg cccgcggcga ggttccgggc
     1261 gcaatcccgg tccggttgcc aagccggaat atatgcgtat cgaccgccat cgtatcttgc
     1321 ttgaacgcaa cgttcaaaac cacattggcg gtcttgcgcc caacgcccgg cagtgcctcc
     1381 agcgcttcgc ggtccgccgg cacctcaccg ccgtgcgtcg ccagcaattg ccgtgacaat
     1441 tccactacat tccgcgcctt cccctgccat agcccgatcg agcggatatg cctcgccaca
     1501 ccatcaaccc caagtcgcac catcgcctcc ggcgtcggag cgtcggcgaa cagcgtctgg
     1561 gtcaccctgt tgaccgacac gtcggtcgcc tgcgccgata acaccacggc gaccagcaaa
     1621 gtaaatggcg tgttgaattc gagttcgctc tccggttccg gattggtggc ggcgatcgcc
     1681 tcgatgaagc tgcgcaccgc ggcacgggtc atcagctttg gtttggccga ggtcttggct
     1741 gcgggtttgg ccgacgcctt gggtttgggt ggcgacctgg gtttgggtgg cgacttgcgt
     1801 ttggcggacg ccgtggccag ggcgttgacc gacgcctcgc ctggtgcgcg ggccgtcggt
     1861 ttgccggcgg atttgatccg cactcggccg gacaatttcg cgggagcctt gcgcgccggc
     1921 ctggtcgccg tggacttagt cgaacccaag gaaaccctcc atttctcgga ttggccgcgc
     1981 cgcgcgcaag gtcgaaatat tgggtaccgg tcgcgcggtg cggacatcac catccagcaa
     2041 cgtttccaac gcatgcgcga ccgccagcac caaggcgtcc ccaccccgag gtccaacgat
     2101 ctgcaagccg aacggcatcc cgttgcgatc cagtccaacc ggcaacgata ccgccggatg
     2161 gcccggcaag gtcaccgcgt aagccagagc caaccaatgg aaataggttc gggtcggttt
     2221 gccatcgatt tccgccgggt aaagctcgcg ccaggagcga gggctgatgg tgatcgacgg
     2281 ggtgaggatc acgtcatacc gttcaaagaa tgtttgccaa cgccggtaga ttgtcgtctg
     2341 caaattcaac gcccgcgcca cctcggcggc gccgtaacgt tgtccttcag caacgttggc
     2401 gtggacattg ggaccaacct cgcccggccg gtcgcgcaca ttgtcggcct gagtggccag
     2461 gaatgccagc gagcgcagga tttcgaacgc ctcgtcggta ccggaacaat ccggttccgt
     2521 aacttcagtc tgggcgaaaa catgctggaa caggctgcat ttttccgcga ataccgcggc
     2581 gacgtggcgc tcggtcgggg cgaagccgaa atccggcgtc agagcgaccc gcagccgaga
     2641 caaatcgatc gttgccggcg ggtaaaactc tgcagcatga cgcattaccc gtccgtgcac
     2701 cgaataagcc agcggatcac gcacatcgtc cgatgcgatg gcgccgagca acaaacacgt
     2761 atccgctacg gtccgagcca ttgggccgag tactggcaga ttggaccacc cgatcggccg
     2821 cttgtccgac ggcacgaggc cgggtgatgg ccgaaacccg acaataccgg aaaacgctgc
     2881 cggattgcgt aacgatccgc cggtgtctga gccggtgcaa atcggaacca tcccggtcgc
     2941 cagcgccacc gccgacccgc ccgaggaacc cgccgcagtt ttttccggat cgaacggatt
     3001 gccggtcgcg ccatagacgg cgttgcgcgt attggctccg gcgccgaatt ccggcgtgtt
     3061 ggttttgccg agtacgattg cgcccgaccg ccgcacggca gcgacgatgg cgtcgtcctc
     3121 agccgggatg tagtccttgt agatcacgct gccgcgcgtg gtgacgaggt ctttggtctc
     3181 ctgcaaatcc ttgatgccaa tcggcagccc gtgcagcgaa ggcagatcct cgccgcgcgc
     3241 cacagccgca tcggcgcgcc gcgctgctgc acgcgcccgc tcgaaatcgc gcgccgggat
     3301 tgcgttgact gcgtggtcca cggattcaat gcgcgcgatg caactggcca gcagttccga
     3361 gggggccaaa cgtttcgcac cgatcaacag gcgcgcagca acggccgtga gatcgcaggg
     3421 ttcgaccatt cgtgacactc cggcactggt tgtcccacgt ggcgtaatgc gactgcggcg
     3481 ccgtgccaag tgcgtggcgc ccttgcaaca ccgaggttgc cggatgtcat caggcgtata
     3541 gactgtcgcc atgaccaccg agcccgccac ccctcggacg agaaatgccc ggattcccgt
     3601 atcagacagt gtgcgaaaaa cgctgacacg ccagctcggc ctccgtgttg cggagggcgg
     3661 gggatgaggc agaatttgtc acaggcggac gcgccgcggt tcgacgtgct gatcaacccg
     3721 ccggacctga cgccgtggct ggccggcgat ggcggtattc caggcgtgat cacccgtgaa
     3781 tccggccggc ccggccccca tgtcgccttg ctgtcgttaa cgcatggcaa cgaattcgct
     3841 ggcgcgatcg tgctcgaccg gttgctgcgt aacgatctga tgccggtgcg cggcaccctg
     3901 agttttgcgt tcgtcaacct cgccgcattt gcaaaattcg atccgcgcac gccgacctgg
     3961 tctcgcttca tcgacgagga catcaaccgg ctttgggaag agccggttct ggccagcccg
     4021 cggcattcgg tcgagctcga ccgggcgcgc gagttgcggc cattgatcga tcgcgccgac
     4081 gtgattttgg acctgcattc gatgttgtgg ccgtcggacc cgctgatcct gtgcgggccg
     4141 accgcgcgcg ggcgggcgct tggccagggg atgggctggc cgccactcgt ggtggccgat
     4201 accggccatg ccaacgggcc aagattgatt gactacgtgc ggttcgcggg caccaatgcg
     4261 acggcggtac tggtagaggc ggggcagcac tggcgtccgg aaaccgtcga gaccaccacc
     4321 gcgagcgtat cggggctgct gtggcatctt ggattggttg acgaagaaac gaatttgccg
     4381 ccgttgcaac cgaaactgcc gagccggttt gcgctggtga ccgatgttgt gacggcgcgc
     4441 agcagttcgt ttgcgttcgt gcgggcatgg tacggcggcg aggtggtgcc ggcacgtaat
     4501 accgtgatcg cggttgacgg ctcgaccgag atcaggacgc cgtacgacga ttgtctgctg
     4561 gtgatgccga gtttgcggcc cgggcgaggt cacactgcag tacgactggc gaagtttgtg
     4621 aactgattgg gaccggacaa cgtgccgtgc cggttctgta ccggcgaccc tggcgattgg
     4681 tgctgccgtg tgatcgtccc aggtcgggcc aggttgccga ggaaccacca acaactctgg
     4741 ccggcgagcg cagcaccgtt atcctcgggc ccggcttcag caaccacggc acgtattcag
     4801 gcgagcctgc ctttcggccg caagtgaagc tgagcatgga tgagatcgtc gttgtcgatg
     4861 atcgcatcac tgttccgttc agggtcacag agttgttcgt acagtgcgta agccggacgg
     4921 tagcgttttg cgtagaggtt tctcgccgcc gcttcacctc ccaggtgctc gatgtcccgg
     4981 ctgagcccgc gtgcctcggc aatctcggcc gaggtccgca cgaagaccgt tacgtcccag
     5041 tggtattgca gttcagggcg ctgcaggaac gttccgtcta ccatcaggat ggcgtcctca
     5101 gccgcggttt gcggtgcctg ctcgatgggc tggtcggcat cgagatcgaa ggacgctgtg
     5161 cgatactgcc ggtccccgcc cggccctagc ggagcgagca gaagcgccac gacggcggcg
     5221 aggtcgcgtg cctcgtagta atatccctcg gccgagtaac ggcctcgagc gtagcgcgcc
     5281 gcccgtggtc gatgg
//
LOCUS       DATAVD010001345         3416 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1989723, whole genome shotgun sequence.
ACCESSION   DATAVD010001345 DATAVD010000000
VERSION     DATAVD010001345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3416
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1989723"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..1156)
                     /locus_tag="VHX39_25745"
     CDS             complement(44..1156)
                     /locus_tag="VHX39_25745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX3994592.1"
                     /translation="MLKTSILGAALLAGLLSLPGAIPAAAQVQIGVAGPLTGSNAAAG
                     DQMKTGATQAVADLNKAGGVLGQQIQLTVSDDACDPKQAVSVANQMVEKKVVLVAGHY
                     CSGSSIPASKVYLEEGILEISPASTNPKYTDEGGWGTFRVCGRDDQQGEVAGKYLAKH
                     FKGQKIAILNDNSAYGKGLADETKKSLNAEGVKETVFDAYTPGEKDYSAVVSRLKQAG
                     VTVIYIGGYYTEAALIIRQAKEQGMKATLVSGDALVTKEFFQIAGPAGVGTLMTFSPD
                     PRKNSVAAKVVKEFTDEKIDPEGYVLYTYATIQIWAEAVKKAGSTDPKKVAATLKASG
                     PWPSVLGPVTFDKKGDVTGGAYVMYIWEADGSYKQM"
     gene            complement(1431..1781)
                     /locus_tag="VHX39_25750"
     CDS             complement(1431..1781)
                     /locus_tag="VHX39_25750"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3994593.1"
                     /translation="MNHGVTIRPFVEEDAGQVRELFVVVNRLLAPPHMQDAFEAYIGR
                     SLSEEVDRIIAYYGERDGGFRVALRDNAIVGMFGIERIAPDAMELRRMYVDPSVRRGG
                     ITDHVRYDIDIQPP"
     gene            complement(1797..2771)
                     /locus_tag="VHX39_25755"
     CDS             complement(1797..2771)
                     /locus_tag="VHX39_25755"
                     /EC_number="7.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HEX3994594.1"
                     /translation="MSEPLLRVNQLVKNFPVRGGILAREIDQVHAVDNVSFQLAAGET
                     LGLVGESGCGKSTTGRCILRLIEPTSGEIWFQGQNVTEFDHRTLTALRRDIQIIFQDP
                     YASLNPRMTVGAIIGEALTIHRLAGNRRAFEDRVAELLETVGLNPDHMRRFPHEFSGG
                     QRQRIGIARALAVSPKLIVCDEPVSALDVSIQAQVINLLEDLQDEFGLTYLFIAHDLS
                     VVEHISNRVAVMYLGRIVEIATANELYSAPLHPYTEALLSAVPVPDPTVKRQRIRLEG
                     DVPNPIHPPTGCHFHTRCPIRELPLCSTEKPLLRETSNGHFVACHLRG"
     gene            complement(2790..>3416)
                     /locus_tag="VHX39_25760"
     CDS             complement(2790..>3416)
                     /locus_tag="VHX39_25760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3994595.1"
                     /translation="ESLRLHEHLGRRAAMDRAAEMLTLVHIPNAAKRVHDYPHQFSGG
                     MRQRVMIAMALSCNPKLLIADEPTTALDVTIQAQILDLLGEMKSRFGMAIMLITHAMG
                     VVAETAQRVVVMYAGRVVEEASVEQLFAQPLHPYTQGLIRSIPRIDTSVGKKHRLEAI
                     AGMVPGLIDPPPGCRFAPRCKFARPACTEAVPELRTTETGHKVACILY"
BASE COUNT          660 a         1057 c          990 g          709 t
ORIGIN      
        1 tgtcagattg ctgacagggc gcaccgtagc gatttctgtc ggttcacatc tgtttgtagc
       61 tgccgtcggc ttcccagatg tacatgacgt acgcacctcc cgtaacgtcg cctttcttat
      121 caaaggtgac cgggcccagt acactcggcc aaggtccgct cgccttcaat gtggcggcca
      181 ctttcttggg atctgtcgag ccggccttct tcaccgcctc agcccagatc tggatcgtgg
      241 cataggtgta cagaacatac ccttcagggt cgattttctc gtcagtgaac tctttcacca
      301 ccttggcggc cacggaattc ttgcgcggat caggcgagaa cgtcatcagc gtgcccaccc
      361 cggccgggcc ggcgatctgg aagaactcct tggttaccag cgcgtcgccg gagaccagcg
      421 tggccttcat tccctgctct tttgcctggc gaatgatgag tgcggcttcg gtgtagtagc
      481 caccgatata gatcaccgtg accccggcct gtttcaggcg gctgaccacc gcactgtaat
      541 ccttctcacc gggcgtatag gcgtcaaata ccgtctcttt cacgccctcg gcgttcagcg
      601 acttcttggt ctcgtcggcg aggcctttgc cgtaagcaga attgtcattc aaaattgcga
      661 ttttctgacc cttgaaatgc tttgccagat acttgcccgc gacctcgcct tgctgatcgt
      721 cgcgcccgca gacacggaac gtgccccagc cgccttcatc ggtatatttc gggttggtcg
      781 aggcgggcga aatctcgaga atgccttcct ccagatacac tttgctcgcc gggatcgagc
      841 tgccggagca gtaatgtccc gctaccagca cgactttctt ttccaccatc tggttggcga
      901 ccgagacagc ctgcttcggg tcgcaggcgt cgtccgagac ggtcaactgg atctgttggc
      961 ccagtacgcc gccggctttg ttcaggtccg ccacagcctg ggttgcgcca gtcttcatct
     1021 ggtcgccagc cgcggcattg gagccggtca acgggcctgc cacgccgatc tgcacctgtg
     1081 cagccgctgg aattgccccc ggaagtgata gtaatccggc cagcaaggcc gccccgagta
     1141 tggatgtttt caacatcgcg cgtccccatt gttattcaaa ctgccacaag ttagcccgca
     1201 cgcatcagaa gtgccaggta gcaccctcgc tatctccgga tatcccgaag attgcgctga
     1261 tcatgcgctg acatcgcagg cgtctgggct tcgaccgcat ccggccacgg tcagcagacg
     1321 gagccaacca aagcgcggtc agcaaagccg gattttgcga gtcgtgccaa tacggggttc
     1381 gtgtcggcac atttttcatt cgagatctgc cggagtcaga atttgccgat tcagggcggc
     1441 tggatgtcga tatcgtagcg gacatggtcg gtgattccgc cgcgtcgcac cgatggatcg
     1501 acatacatcc gacgcaattc catcgcgtcc ggagcgatgc gctcaatgcc aaacattcca
     1561 acgatcgcgt tgtcccgcaa cgcgacccgg aagccgccgt cacgttcgcc ataataggca
     1621 atgatcctat cgacttcttc ggacagcgag cgcccgatgt aagcctcgaa cgcatcttgc
     1681 atatgcggcg gcgccagcag ccgattcaca acaacgaaaa gttcccgtac ctgaccggcg
     1741 tcttcctcca cgaatgggcg gatggtgacg ccatggttca tcggctggta aaccgcctat
     1801 ccgcgcagat ggcaggcgac gaagtggccg ttcgaggtct cccgcaacag cggcttttcc
     1861 gtgctgcaca atggcaactc gcggatcgga catctggtgt ggaagtggca gcctgttggc
     1921 gggtgaattg ggttcggaac atcgccctcc aaccggatac gttggcgttt caccgtcggg
     1981 tcgggaactg gtacggcaga cagcagtgcc tcagtataag gatgcaacgg tgcggaatac
     2041 aattcgttgg cggtggcgat ttcgacgatc cggccaagat acatcaccgc aacgcggttg
     2101 ctgatatgct ctacgaccga cagatcgtgc gcgataaaca aatacgtcag cccgaactcg
     2161 tcctgcagat cctccaacaa attgatcacc tgggcctgga tcgacacgtc gagagcagaa
     2221 accggctcat cgcacacgat cagcttcggc gacaccgcca gggcgcgcgc aatgccgatg
     2281 cgctggcgct gaccaccgga gaactcgtgc gggaaacgcc gcatatggtc ggggttaagg
     2341 ccgacagttt ccagcagctc ggccacacgg tcctcgaatg cgcggcggtt gccggccagc
     2401 cgatggatgg tcagagcctc gccaataatc gctccaaccg tcatgcgcgg attgagtgac
     2461 gcgtaaggat cctggaagat gatctggata tcgcgtcgca acgcggtcag cgtgcggtga
     2521 tcgaattcgg tgacgttctg accctgaaac caaatctctc ccgaggtcgg ctcgatcagt
     2581 cgcaggatgc aacgtccggt cgtagacttg ccacagccgg attcaccgac caggccgagt
     2641 gtctcgccgg cagccagctg gaagctgacg ttgtcgacgg cgtgcacctg atcgatctcg
     2701 cgcgccagta ttccgcccct cacagggaaa ttcttcacca actgattgac gcgtagcagc
     2761 ggctcgctca tcacgttgtc gtcccggttt caatacagga tgcaggcgac cttatggccg
     2821 gtctcagtcg tgcggagttc aggcacggcc tcggtgcagg cgggcctggc aaacttgcag
     2881 cgcggtgcga agcggcatcc cggcggcggg tcgatcaacc cgggcaccat cccggcaatt
     2941 gcttccaggc ggtgcttctt cccgacactt gtgtcgatgc gagggatcga gcggatcagg
     3001 ccttgcgtgt aaggatgcaa cggttgggcg aacagttgct cgacggaggc ttcttcgacc
     3061 actcggccgg catacatgac cacaacacgc tgtgcggtct cggccaccac gcccatggcg
     3121 tgggtgatca acatgatcgc catgccgaac cgagacttca tctcgcccaa cagatccagg
     3181 atctgcgcct ggatcgtgac atcgagcgct gttgtcggtt cgtccgcaat cagcagcttc
     3241 ggattgcagg acagcgccat tgcgatcatc acgcgctgac gcatgccgcc ggagaactgg
     3301 tgcggatagt cgtgcacgcg cttggccgcg ttggggatgt gaaccagcgt cagcatttcc
     3361 gccgctcggt ccatcgcggc ccgccggccg agatgctcgt gcaggcgcag cgactc
//
LOCUS       DATAVD010001346         5712 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3478209, whole genome shotgun sequence.
ACCESSION   DATAVD010001346 DATAVD010000000
VERSION     DATAVD010001346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5712
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3478209"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..818
                     /locus_tag="VHX39_25765"
     CDS             <1..818
                     /locus_tag="VHX39_25765"
                     /inference="COORDINATES: protein motif:HMM:NF018420.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1194 domain-containing protein"
                     /protein_id="HEX3994596.1"
                     /translation="RCRDETGPAATEACSMARLRWVVLGIGVLISLAGVPVVPACAAD
                     DVDLALVLVTDVSRSIDDSEFTLEKSGYAAAFTSNQVLTAIRNGPLGAIAVSYVEFAS
                     GFEVKTVLDWSVIRDPASAQAFVDKLTAQPRSYWGRTAISAGIDHAVGMLAENNLNAS
                     RRTIDVCGDGTNNAGREVSEARDDALKSGITINGLAIINEHPVSWTFAHVQPPGGLPK
                     YYQENVTGGPGSFVMEVRDFKAFGDAMTRKLVAEIASRQVPPRFASGTVTPSH"
     gene            953..1384
                     /locus_tag="VHX39_25770"
     CDS             953..1384
                     /locus_tag="VHX39_25770"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3994597.1"
                     /translation="MTVVLLPVLEELPAGFDALRSDARDEGHTNMERLAADWTSGANR
                     FDSVGEALLAAFITDELTGVGGITRDPVCPEALRLRRFYVRPAFRRHGVGGCLAHALI
                     QKSRHLTKCLVLNAETDLAVRFWQALGFVEHRRDGHTHIWR"
     gene            1480..2553
                     /locus_tag="VHX39_25775"
     CDS             1480..2553
                     /locus_tag="VHX39_25775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3994598.1"
                     /translation="MEIRNLGVSGLLVSSIGLGCNNFGARIDLEATRAVIHKAIDLGI
                     TLFDNSDTYGDRGGAEIAMGQVLGDRRKDIVLATKFGNPMDDAGVKQGGARRYIMTAV
                     EDSLRRLRTDWIDLYQIHCCDPRTPIEETLRALDDLVRQGKVRYIGCSNFPAWRLTEA
                     HWTAQMHGLNRFISHQDEYSLTFRKPEAELMPAARAAGMGMLPFSPLASGLLTGKYRR
                     NAPLPAGTRFANTQRLADRYLTDRNWDVAEKLGDFAEARGRTMLELAFSWLLSRPPVT
                     SVIAGATRPEQVAQNVKAGAWKLTEDDLAEIDRITAGLNDGFRQIWRDSACPSNEVLV
                     QRHVHCAFGRRSVVTHRSPPLCA"
     gene            2844..4403
                     /locus_tag="VHX39_25780"
     CDS             2844..4403
                     /locus_tag="VHX39_25780"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat-containing
                     glycosyltransferase family protein"
                     /protein_id="HEX3994599.1"
                     /translation="MTSTQGSAPEQPASAQASLARPVLGSSAAGPVSTGQAPAAAAQT
                     APGQPAATQSTAGQAGAETPDQALARAQSAAQAKRLSEASGICEDVLAANADYPAALA
                     LLGIVMAMKNDLERGVELMRKAISLRPGIPSWYAHLSSMCRNTYRMDEAVQAGQESIR
                     LDPNNADHLVNMSLVFVDVDDRDRAIACLLRALGLKHEHADGHLAMAQILLAQRNFQP
                     GWAEYEWRNLTEAGKATMPSMTSAHWNGMPIPTGRLLLVGDQGYGDTIQFARYIGMAA
                     ERVQDIILGCSQEMGPLLENIPGVTQYCHRWNDVPGHAVHCRLSSLPHIFGTTPDTIP
                     AKVPYLFAEPDRVTHWRERLEATLPHGLKRIGLAWTGRPTHPNDRRRSVRLSRLLPLT
                     EAGPAAFVSLQKPMPAADQETMTAFNGMTDLSAELTDFGETAALIQNLDLVITVDTSM
                     GHLAGAMAKPVWIMVPKAADWRWQLERDDSPWYPTARLFRQAKPGEWDPVLARLSTAL
                     SGELRQRAAAD"
     gene            4410..5378
                     /locus_tag="VHX39_25785"
     CDS             4410..5378
                     /locus_tag="VHX39_25785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994600.1"
                     /translation="MVDPDIWADAGRWFDRDWYLLRNPDVRQVGIDPLAHYRRYGESE
                     GRFPSPWFNPAWYRRAYDIPIEQSPLEHFLRHRSSGQFLPCAALYLVPQLPQWRDDRA
                     DPFDRYLAATFVPEHELLPDLSQIEPSGLIDATYYRINPVGEFENELDPALHYCRIGW
                     RVGLRPSTAFEPDWYVESNPIIARLRINPLTHYIVEGEAANRRPAPWFDPAWYRAAYQ
                     VPPEQLALAHYLQHRHGRTVSPNPWFDVNRYVAHYGASIPPEIDPFSHYLVCGALRDI
                     DPSERFDARLWRHRHMAPPAAVGQSELPVTARNPLVHFMRVRYAAD"
     gene            5528..>5712
                     /locus_tag="VHX39_25790"
     CDS             5528..>5712
                     /locus_tag="VHX39_25790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008921974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994601.1"
                     /translation="MTVDIHSGTLNKVPEVTLVFWIIKIAATTLGETGGDSVTMTLNW
                     GYFDGTALFLGLLIALV"
BASE COUNT         1041 a         1852 c         1753 g         1066 t
ORIGIN      
        1 ggcgttgccg ggatgaaacg ggtcccgccg cgacggaggc gtgttccatg gcacggttgc
       61 gctgggtcgt actgggcatc ggggtgttga tttcgctcgc gggcgttccg gtggtaccgg
      121 cctgtgcagc ggacgatgtc gacctcgcgc tggtcctggt caccgatgtc tcccgcagca
      181 tcgacgacag cgaatttact ttggaaaaaa gcggttacgc tgccgcgttc accagcaatc
      241 aggtgctgac cgcgatcagg aacgggccgc ttggcgcaat cgccgtctcc tatgtcgagt
      301 ttgccagcgg gttcgaggtg aagaccgtgc tggactggag cgtgatccgc gaccccgcct
      361 cggcccaggc atttgtggat aagttgaccg cccagccaag gtcgtactgg ggccgcaccg
      421 cgatcagcgc gggcatcgac catgccgtcg gaatgctggc ggagaacaac ctcaacgcgt
      481 cgcgccggac catcgatgtc tgtggcgacg gcaccaataa cgccggacgt gaggtctccg
      541 aagcacgcga tgacgcgttg aagtcgggga tcacgatcaa cggcctcgcc atcatcaacg
      601 agcatccggt gtcgtggacc tttgcgcacg tgcagccgcc gggtggtctg ccgaaatatt
      661 accaggagaa cgtgacgggc ggaccaggga gcttcgtcat ggaagtcaga gattttaaag
      721 catttggcga tgcgatgacc cgcaaactgg tggccgagat cgcatcccgc caggtgcccc
      781 cgcgattcgc ctccggcacc gttacaccgt cacactgacc ggactgccac tgaccggact
      841 gccactgacc ggattggcgg tgtatggaca gcgtcaggcg cctggcggcc ttcgaagcgg
      901 accctatcac cggcggcacc gcgcccgaga tcgtcccgtt ccggatcacg ccatgactgt
      961 tgtcctgttg cccgtactgg aagaattgcc cgctggcttc gacgcacttc gcagcgacgc
     1021 gcgggatgaa ggccacacca acatggagcg gcttgccgca gactggacca gcggcgccaa
     1081 tcgtttcgat tccgtcggcg aggccttgct cgccgcattc attaccgatg aattgaccgg
     1141 cgtaggcggc ataacgcgcg atccggtctg cccggaggcg ctccgcctgc gtcgtttcta
     1201 tgtccgtccg gcgtttcgcc gccatggtgt cggaggttgc ctggcgcacg cgcttatcca
     1261 aaagtcccgc catttgacca aatgcctggt actcaacgcc gaaaccgacc tcgccgtgcg
     1321 tttctggcaa gccctgggct ttgtcgaaca tcgccgtgac ggccacacgc acatttggcg
     1381 gtgaccctgc cgcatcaatt cggccgaaag cccgccatca tggacaaccc aatccgcctt
     1441 tgacatgctt ggccttggcc gaacgcagga gcaaagccga tggaaatccg caatctgggc
     1501 gtgtccggcc tgctcgtgtc cagcatcggt ctcggctgca acaatttcgg cgcccggatc
     1561 gaccttgagg cgacccgcgc cgtcatccac aaagccatcg atctcggcat caccttgttc
     1621 gacaattccg acacctacgg cgatcgtggc ggggccgaaa ttgcgatggg tcaggtcctt
     1681 ggcgaccgcc gcaaggacat cgtcctggcc accaaattcg gcaacccgat ggacgatgcc
     1741 ggagtgaaac aaggcggcgc ccgccgttac atcatgaccg ccgtcgagga cagcttacgc
     1801 cgcctgcgca ccgactggat cgatctgtat cagatccatt gttgcgatcc ccgcaccccg
     1861 atcgaggaga ccttgcgcgc cctcgacgac ctcgtccggc agggcaaggt gcgttatatc
     1921 ggctgctcca acttcccggc ctggcggctg accgaggcgc attggaccgc ccagatgcac
     1981 gggctgaacc ggttcatttc gcaccaggac gagtattcgc tcaccttccg caaacccgag
     2041 gccgagttga tgccggcggc tcgggctgcc gggatgggaa tgctgccgtt ctcgcccctg
     2101 gcgagcggcc tgctgaccgg caagtaccgg cgcaatgcac cactgccggc cggcacacgg
     2161 ttcgccaaca cgcagcgcct cgccgatcgt tacttaaccg atcgaaactg ggatgttgcc
     2221 gagaaactcg gggattttgc cgaagcccgc ggccggacga tgctggagct ggcgttctcc
     2281 tggctgctgt cgcgcccgcc ggtgaccagc gtgatcgccg gcgccaccag gccggaacag
     2341 gttgcgcaaa acgtcaaagc cggcgcctgg aagttgaccg aagacgatct ggccgagatc
     2401 gatcgtatta cggcagggtt aaacgacggt ttcagacaaa tttggcgtga ttccgcgtgc
     2461 ccgtcgaacg aggtcctcgt tcagcgtcat gttcactgcg cgtttgggcg ccgctccgtc
     2521 gtaacccatc gtagtcctcc attatgcgca tgatatgcgc accacagaga ggttcgagct
     2581 ctttaatggc gtccccgtta gcgacaatct cgaaataaca tcaggccggc atccagggaa
     2641 cggtccaccg caacccatca ctcaggtttt cctcggaacc cgctccggac gtcgcccaac
     2701 cacgggcggt gacaaccacg cgcggcactc gcagtcgcgc cgattggcga cctgatctac
     2761 ccggcgcccc tgcctccggg tgtcgtggaa agcgatactg cttgcggtcg ccagccccca
     2821 tgggcatttt gccggccatg agcatgacct cgactcaggg cagcgcaccc gagcaacccg
     2881 cttctgcgca agcctccctg gcgcgacccg tactgggctc atctgcagca ggaccggttt
     2941 ccacaggtca ggccccggcg gctgcagctc aaacggcacc cggccagccg gcggcaactc
     3001 aatcaaccgc aggccaggca ggcgcggaaa ccccggatca ggccctcgcc cgcgcccaat
     3061 cggcggcgca ggcaaagcgg ctgagcgagg caagcgggat ttgcgaggac gtgctcgccg
     3121 ccaatgccga ctatccggcc gcgctggcac tgctcggcat cgtcatggcg atgaagaacg
     3181 acctcgagcg cggcgtcgag ttgatgcgca aggcaatttc cctgcggccc ggcataccca
     3241 gttggtacgc ccacctcagt tcgatgtgtc gcaataccta ccggatggat gaagcggtgc
     3301 aggccggtca ggaatcgatc cggctcgacc caaacaatgc cgaccacctc gtgaacatgt
     3361 cgctggtttt cgtcgatgtc gacgaccggg accgtgccat cgcctgcctg ctgcgtgccc
     3421 tcggcctgaa gcacgagcac gccgacgggc atctggcgat ggcgcaaatc ctgctggcgc
     3481 agcgcaactt ccagcccggt tgggccgaat acgagtggcg gaacctgacc gaggccggca
     3541 aagccaccat gccgtcaatg acctcggcgc actggaacgg catgccgatc ccgaccgggc
     3601 gattgctgct ggtcggcgac cagggttatg gcgacaccat tcagttcgcc cgctatatcg
     3661 gcatggccgc cgagcgcgtg caggacatca ttctggggtg cagccaggag atgggtccgc
     3721 tgctggagaa cattcccggc gtgacgcaat attgtcatcg ctggaatgac gtgccgggcc
     3781 acgcggtgca ttgccggctg tccagcctgc cgcacatctt cggcaccacg cccgacacca
     3841 ttccggccaa ggtgccctac ctgtttgccg aacccgaccg tgtgacgcac tggcgcgagc
     3901 ggctcgaggc caccctgccg catggcctga aacgcatcgg tctggcctgg accggccggc
     3961 cgacccatcc caacgaccgg cgccgttcgg ttcgcctgtc ccggctgctg ccgctgaccg
     4021 aggccggccc agctgccttc gtctccctgc agaaaccaat gcccgccgca gaccaggaga
     4081 cgatgacggc attcaacggg atgaccgacc tgtcggcgga gctgaccgat ttcggggaga
     4141 ccgcggcact gatccaaaac cttgatttgg taattaccgt cgatacctcg atgggccatc
     4201 tggccggcgc gatggccaag ccggtctgga tcatggtgcc caaagcggcc gactggcgtt
     4261 ggcagttgga acgtgacgac agcccttggt acccgaccgc tcggctgttc cggcaggcga
     4321 aaccgggcga gtgggacccg gtgctggcgc ggttgtccac cgctctgtcc ggcgaactcc
     4381 gccagcgagc cgcggccgac tgatctgccg tggttgatcc ggacatctgg gctgatgccg
     4441 gccgctggtt cgatcgtgac tggtacctgc tgcgcaatcc cgacgtccgc caggttggga
     4501 tcgatccgtt ggcgcattat cggcgctacg gcgaatcaga gggccgcttt ccgtcaccct
     4561 ggttcaatcc ggcctggtat cgccgggcgt acgacatccc gattgagcaa tcgccgcttg
     4621 aacattttct gcgacaccgc agctccggtc agttcctgcc ttgcgccgcg ctgtatctgg
     4681 tgccgcaatt gccgcagtgg cgcgacgatc gagccgatcc tttcgatcgg tatttagcag
     4741 caacgttcgt accggagcac gagctgttgc cggacctgag ccaaattgaa ccgtccggac
     4801 tgatcgatgc gacgtattac cggatcaacc cggtcggtga attcgaaaac gaactcgatc
     4861 ctgccttgca ttattgccgg atcggctggc gcgtcgggct gcggcccagt accgcattcg
     4921 agccggattg gtacgtcgag agcaacccga tcattgcgcg tttgcggatc aatccgctga
     4981 cgcactatat cgttgaaggc gaggctgcca atcgccggcc cgccccgtgg ttcgatccgg
     5041 cctggtaccg ggccgcctac caggtaccgc cggaacagct ggcgttggcg cattatctgc
     5101 aacatcgcca cgggcgtacg gtcagtccga atccgtggtt cgatgtgaat cgatatgtcg
     5161 cgcattacgg ggcctcgatc ccgcccgaga tcgatccgtt ttcgcactat cttgtgtgcg
     5221 gtgcgttgcg ggatatcgac ccgtccgagc ggtttgatgc ccgtttgtgg cggcatcggc
     5281 acatggcgcc gccggcggcc gttggtcagt cggagctgcc ggtgacggcg cgcaatccat
     5341 tggtgcattt catgcgggtc cgatacgctg cagattaaag ctgcattgat tctacgacag
     5401 accaggacat cgacggaacc gggcctgtgc gccatgatat acggcgcagg actttgcgat
     5461 ccgctagtac catttcatgc tgcgttgccg ccacccggca gcaattgaag aaaggtaggc
     5521 cgtaaccatg actgtcgaca tccattcagg gacgctcaat aaggtccccg aagtcacctt
     5581 ggtcttctgg atcattaaga tcgctgcgac gacactggga gaaaccggcg gcgattcggt
     5641 cacgatgacg ctgaactggg gttacttcga tggcacggcc ttattcctgg gcttgcttat
     5701 cgcactggtc at
//
LOCUS       DATAVD010001347         8361 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1057815, whole genome shotgun sequence.
ACCESSION   DATAVD010001347 DATAVD010000000
VERSION     DATAVD010001347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8361
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1057815"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(261..962)
                     /locus_tag="VHX39_25795"
     CDS             complement(261..962)
                     /locus_tag="VHX39_25795"
                     /inference="COORDINATES: protein motif:HMM:NF006035.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3994602.1"
                     /translation="MADPSVAVVVGANRGIGLGVVREFLSRGWSVIATARHPDMAADL
                     QSLAAANPGKLEILGLDLTNTSQMDGFAGALAGRKLDAVLINGGTAGPDHMSASQATE
                     AEIGSLMLTNAVAPIRLARALSGLLREKTGVLAFTSSIMGSVALNSDGYHELYRASKA
                     ALNSLSRGLWTEVKGRGITLLNLHPGWVRTDMGGPSAPVGVEESARGLVGVIERERGK
                     HHHAFISFQGDELAW"
     gene            complement(996..1982)
                     /locus_tag="VHX39_25800"
     CDS             complement(996..1982)
                     /locus_tag="VHX39_25800"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone reductase"
                     /protein_id="HEX3994603.1"
                     /translation="MRAVWYDRQGPANEVIVQGELPTPEPGTGEVRVRLEASGVNPSD
                     TYRRRGAVPGEYSRVIPNSDGAGVVDKVGPMVPERWVGKRVWLYNGQRNGRWMGTAAE
                     FISLSVDLVTELPGHVSFAEGATLGVPGMTAHGCVFAAAPVQGKIVLVTGGAGAVGHY
                     AVQLAVWAGASVIATVSSEEKAARARAGGAAHVINYRTEDVAARVRDITGGELVDHVV
                     DVDFGGNLAAALGSVRDGGSIAYYASNGALQPEVPLRTVMAKNLTIRGFVLPTSRHAD
                     RKRAQTDMARFIASPGRMLSVDGTFPLYQTAAAHLSVEQGGKVGTVVVEPQK"
     gene            2127..3050
                     /locus_tag="VHX39_25805"
     CDS             2127..3050
                     /locus_tag="VHX39_25805"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEX3994604.1"
                     /translation="MEDSGLPAMAAAALAELRKAARLEGAAIIDMARPDSASVLLFDA
                     APGVPDPIGSAHQMLRRCPDAPSYSVGADKRPILVSPWILHPDRRGGLALWRKAGATP
                     WDERDADFANAVAGLMRVILEHGPGEASIDRLTGLPNRPYFLGEVNRHIDRLEQDGTT
                     GTMILIDLDGLRRVNASHGRALGDDLLIRTANLLRGIVRPVDMVARVGGDEFAVWLDN
                     MDHMTAAERAVGLAERRLTLPESAVVIEQTESGQEPEPYEMTLSVGIASRQLGDGEDA
                     RALLRRAHKALWEAKQNGGGGWAVSRIPRVG"
     gene            complement(3063..5462)
                     /locus_tag="VHX39_25810"
     CDS             complement(3063..5462)
                     /locus_tag="VHX39_25810"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3994605.1"
                     /translation="MRLPQLRTALPWAIGVGLLTSLACLAVAIYFDFTARADATQEAA
                     RQLSGKADALARQIDSDMAVYDLTLREATRPLPPGVPGAEPPHLPLIDLPLTSSYIWF
                     INVLNESGDVVADPRSNVSRPVNFAGRDYFQDHRLNPADVVIIGRPFATAPTQHASIP
                     ISRRLNHADGSFAGVVVAGVRLTWLSDLLSRPSPGPHPTIYIRRGDGLILMRTPYDPD
                     AIGRTDGADPAWQAYLRTGLTQPIDDRTGIHLFHRLDAANLVLELGLDNDAIAAGATI
                     WLLLLVLVPGLCVLALSLAALHLRRRGNQIEAGANTAYEESQRMLANMSHELRTPLTG
                     ILGQAELLTEEAGLTERQTTRVKVLIEASTLMRSIVNRVIDVARPDGIIGLPALTPCD
                     LDPLLGRALDLVEGEARRKGLLLVSNVNPATPRRAMLESDRVQQMLNNLLMNAVKFTD
                     QGSVAVRVIGNTDQLRFEIADTGPGIPASKRNRLFRAYDRLGISVARVDGSGLGLSIT
                     ERFARSMGGRVGHSENPGGGSVFWFELPFIEPPATQSEIVRPAPPPIRHLRVLLADDS
                     DLTRAVTSDFLRSGGHMVTEVTGGEAAIDLVRQQNFDVVLTDMRMPIVDGVEVTRRIR
                     ALSGHRARTPIVLITADIAAIRAGEAGRTGVDLCVQKPFTRTELLNTVAAAARLAPVP
                     DAAVADDPALSLTVLAELKQTAGDVAFAGPLDQAARRIAELLELLELPGAPENPELRE
                     AAHDLAGVSGMIGLTALGSALRWFDTAVDRTAPAAAVHEAARESLLALRRLQETAAAG
                     C"
     gene            complement(5653..7191)
                     /locus_tag="VHX39_25815"
     CDS             complement(5653..7191)
                     /locus_tag="VHX39_25815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HEX3994606.1"
                     /translation="MPLNPTALIVFVFLFAVITILGFFAGRWRRGDLDQLHEWGLGGR
                     RFGTIVTWFLIGGDLYTAYTFIAVPALLFGAGAIGFFAVPYTVMIYPLLYLIFPRLWS
                     VCHKHGYVTAADFVRGRYGNRWLALAIAFTGILATMPYIALQLVGMQVVIGAMGIETS
                     GFFGDLPLIIAFVILAAFTYSSGLRAPAMIAVVKDALIYITVFAAIIAVPVHLGGFGP
                     MFAAIPPAKLLLAAPTGNSWGSFSAYATLALGSACALFLYPHSITGILSSSSGRVVRR
                     NAAMLPSYSLMLGLLALVGFMAIAIGVATMPQFAPGFKAYSNNFSVPALFMAMFPDWF
                     VGVAFAAIAIGALVPAAIMSIATANTYTRNVYREFINPNCTDQQESRMAKIVSLVIKA
                     GALIFIFFVPLQYALWLQLLGGVWIVQTVPSVIIGLYTRFYHGWALFLGWLAGFGVGT
                     WMVIDNKYAPIYPLHFLGTTFPCYTALATLVLNIAVATVLSLVFNAVVPDKAHDMTRA
                     ADYA"
     gene            complement(7195..7407)
                     /locus_tag="VHX39_25820"
     CDS             complement(7195..7407)
                     /locus_tag="VHX39_25820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010666260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3311 domain-containing protein"
                     /protein_id="HEX3994607.1"
                     /translation="MSDHNEEHRPVRTVLWARLLLVLPFIAMLWVSSYNSTEPMLAGI
                     PFFYWYQLLWILIGAALIALVYAVER"
     gene            7723..>8361
                     /locus_tag="VHX39_25825"
     CDS             7723..>8361
                     /locus_tag="VHX39_25825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994608.1"
                     /translation="MSGSSSTVAQQRVWASSGTTYNSLPKGYRPILVPSEANIRMLWE
                     KANTNAQAALGIAKTVGKMALRAAPGATTLALGVTAPIGAVFDMVIDGKAALSTSRHI
                     DKLVETELGKCSCGYCEEMVEYVLRKKGSKLIRRGTRAATGIISGGTLITIGEKLKGM
                     YKMAMGTRGVNREAHAVVLWVTAKNGCQCAQDITAELVGSPSTMIATLNNYEG"
BASE COUNT         1678 a         2550 c         2629 g         1504 t
ORIGIN      
        1 ccacacggga tccaggctgg ccagtggcga ttgcggcgcg aacagcagcg tcttcgttgt
       61 gccgccgatt gccggagcgg ccagcacagt gctggcggcg ccggccagaa agccgcgtcg
      121 atgcatgatg gtgtttcctc cgaacgtgcc tgatcctggc actttccgcg gttttgctcc
      181 agcggcatcg acttgcgccg gaggatgtca cggaatcaga atgaagtttc gtgtcgttgg
      241 tgagctctgg aaaatgcggg ctaccaggcc agttcgtcgc cctgaaaact gatgaaggcg
      301 tggtggtgct taccgcgctc gcgttcgatc acgccgacca gtccccgcgc gctttcttcc
      361 acaccgaccg gcgccgatgg accacccatg tcggtgcgca cccatcccgg atgcaaattc
      421 aacaatgtga ttccgcggcc cttcacctcc gtccacagcc cgcgcgacag cgagttcagc
      481 gctgctttgc tcgcccgata cagctcatga tacccgtcgc tgttcagcgc cacgctgccc
      541 atgatggagc tggtgaacgc cagcacccca gtcttctctc gcagcaaccc ggacaaagcg
      601 cgggcaagcc ggatgggcgc gaccgcgttt gtaagcatca aactgccgat ctctgcctcg
      661 gtggcctggc ttgcactcat gtgatcgggc ccggcggtgc ctccgttgat cagtaccgca
      721 tcgagcttcc gccccgccaa ggcgccggcg aacccgtcca tctgactggt gttggtcagg
      781 tccagcccga ggatttccag tttcccgggg ttcgctgcag cgagcgattg cagatccgcc
      841 gccatatcgg gatgcctcgc ggtggcgatc acggaccagc cgcggctcaa gaactccctg
      901 accacaccaa gcccgatgcc acgattggca ccgacgacaa cagcgacaga cggatcggcc
      961 acggcgaaag ctccttcgga aacagccgat catggctatt tttgcggctc gacgacaacg
     1021 gtgcccactt tgccgccctg ctcgacagac aaatgcgcgg cggcggtctg atacagcgga
     1081 aatgtaccgt ccacagacag catccgcccg ggactggcga tgaaacgggc catgtcggtt
     1141 tgcgcgcgtt tgcggtcggc gtgccggctc gtgggcagga cgaagccgcg gatcgtcagg
     1201 ttctttgcca tcaccgttcg caacggcacc tcgggctgca gtgcgccgtt cgaggcataa
     1261 tacgcgatgc tgccgccatc gcgcaccgag cccaaagcgg ccgccaaatt gccgccgaaa
     1321 tcaacgtcga ccacgtggtc gaccaactcg ccgccggtga tgtcgcgcac ccgtgcggcg
     1381 acgtcctcgg tgcggtagtt gatgacgtgt gcggcaccgc cggccctggc ccgcgctgcc
     1441 ttttcctcgg aactcacggt cgcgatcact gacgcgccag cccagactgc caactgcacc
     1501 gcatagtgac cgactgcacc ggcaccaccg gtgaccaaga cgatctttcc ctgcaccggc
     1561 gctgcggcaa acacgcagcc gtgtgcggtc atcccgggaa cgcccagcgt ggcgccttcg
     1621 gcaaaggaga cgtgcccggg aagttctgtg accagatcga cactgagtga aataaactcg
     1681 gccgcggtac ccatccagcg gccgttgcgc tggccgttgt acaaccagac ccgtttgccg
     1741 acccagcgct cggggaccat cgggccgact ttgtcgacca ccccggcgcc atcgctgttc
     1801 gggatcacac gagaatattc tcctggcacc gcaccgcgtc tgcggtacgt gtcagaagga
     1861 ttgacacccg aggcttccag acgcacgcgc acttcgccgg ttccaggctc cggtgttggc
     1921 agttcgcctt gcacgattac ctcatttgcc ggtccttgcc ggtcgtacca gacggctcgc
     1981 atggcgtgtt tccttcgctg tggcgtcatc tctactgtct cagaatatga cgtaaattgc
     2041 cgcgtcgtta ccagccggca agacaaactg tgcgatgtcc tgtgccgctc agacacttca
     2101 gactgcgcgc accggagaat ttggggatgg aagacagcgg gttaccggcg atggcggcgg
     2161 cagcgctggc cgaattacgc aaggcggcgc gattggaagg tgcggctatc atcgacatgg
     2221 cgcggccgga ttcggcttcg gtgctgctgt tcgatgctgc acctggcgtg cccgatccaa
     2281 tcggcagcgc acatcagatg ctgcggcgtt gccccgacgc accgtcctat tccgttggcg
     2341 ccgacaagcg gccgattctg gtatcgccat ggatcctgca tccggatcgt cggggcggac
     2401 tagcgctttg gcgcaaggcg ggcgcaacgc catgggatga acgtgacgcg gatttcgcca
     2461 atgctgtggc gggcctgatg cgggtgatcc tggagcatgg cccaggtgag gcttcgatcg
     2521 atcgcctgac cggtcttccc aaccggcctt attttttggg cgaggtgaac cgccatatcg
     2581 accggctgga acaggacggc acaaccggca cgatgatcct gatcgatctc gacggcttgc
     2641 gccgcgtcaa tgcctcgcac ggccgcgccc tgggcgacga tctgctcatc cggacagcga
     2701 atttgctgcg cggcatcgtg cggccggtgg atatggtcgc gcgcgtcggc ggcgatgagt
     2761 tcgcggtatg gctcgacaac atggaccaca tgacggcggc cgagcgggcg gttggcctgg
     2821 cggaacgccg cctcaccctg cccgagagcg ccgtcgtcat tgaacaaacc gaatccggcc
     2881 aggaacccga gccatacgag atgacgttgt cggtcgggat cgccagccgg caactcggtg
     2941 acggcgagga tgcgcgtgcg ttgctgcgcc gtgcccataa ggcgttgtgg gaagcaaagc
     3001 agaatggcgg cggcggttgg gcggtctcgc ggattcccag ggtcggataa cggcggctgc
     3061 tgttagcaac ccgccgctgc cgtttcctgc aggcggcgga gtgccagcag cgattccctg
     3121 gccgcctcgt gcaccgcagc ggcgggtgcg gtgcggtcca ccgcggtatc gaaccaccgc
     3181 agcgctgagc caagagccgt aagcccgatc atcccggaaa caccggcaag atcgtgcgcg
     3241 gcctcgcgta attcagggtt ctccggcgca ccaggcagtt ccagcagttc cagcagttcg
     3301 gcaatgcggc gcgccgcctg atcgaggggc ccggcgaacg ccacgtcacc cgcagtttgt
     3361 ttcaactcgg ccagaacggt cagactaagc gcaggatcgt ccgcgacagc ggcgtccggg
     3421 acaggcgcca gccgagcggc agcggcaact gtgttcagca gttcggttcg ggtaaacggc
     3481 ttttgaacac acaaatcgac ccctgttcga cctgcctcac cggcgcgaat tgccgcgata
     3541 tcggcagtga tcagcacgat tggggtacgt gcgcggtggc ctgacaaagc gcggatccgt
     3601 cgtgtgacct cgaccccatc gacaattggc atgcgcatgt ccgtcaggac cacgtcgaaa
     3661 ttctgctgcc gaaccagatc gatggctgcc tcaccgcctg tcacctcggt gaccatgtgg
     3721 ccgccggagc ggaggaagtc gctggtcacc gcacgcgtca ggtcgctgtc gtcggcgagc
     3781 aaaacacgca ggtggcggat cggcggcggc gcagggcgaa cgatctccga ctgcgtggcc
     3841 ggaggttcga tgaacggcag ctcgaaccag aacacactgc cgccgccggg attttcacta
     3901 tgtccgaccc gcccacccat gctgcgagca aagcgctcgg tgatcgacaa acccagtcca
     3961 ctgccatcga cacgggcgac tgaaatgccg agacggtcat aggcccggaa caatcggttc
     4021 cgtttgctgg cggggatgcc gggtccggtg tcggcgattt caaaccgcaa ctggtcggta
     4081 ttgccaatga cccgtactgc aacggatccc tggtcggtga atttgacggc gttcatcaga
     4141 aggttgttca acatctgctg tacccggtcg gattccagca tcgcccgtct gggtgtggcg
     4201 ggatttacat tacttacaag caacaatcct ttccgcctgg cttcgccttc aacgagatca
     4261 agggctctgc cgagcaatgg gtcgagatca catggtgtaa gcgccggaag tcctatgatt
     4321 ccgtcgggac gggcgacgtc gatgacccgg ttgacaatac tccgcatcaa cgtgctggcc
     4381 tcgatcagga ctttcacacg ggtggtctgg cgttcggtga gaccagcctc ctccgtcagc
     4441 agctccgcct ggcccaggat gccggtcaac ggcgtgcgga gttcatgact catgtttgcc
     4501 agcatgcgct ggctttcctc gtaagccgtg tttgctccgg cctcgatctg gttgccacgg
     4561 cgtcgcaagt gcagggccgc aagactgagg gccagtacgc aaagtcctgg aaccagcacc
     4621 aacagcagca gccagatcgt cgccccggca gcgatggcgt cattgtcgag cccaagttcc
     4681 agcaccaggt ttgctgcgtc gagccgatgg aacaggtgaa ttccggtgcg gtcgtcgatg
     4741 ggctgtgtca ggccggtgcg aagataagct tgccaggctg gatcggcgcc atcggttcgg
     4801 ccgattgcat ccgggtcata cggggttcgc atcaggatca ggccgtcgcc gcggcggatg
     4861 tatatcgtgg gatgcgggcc gggtgatggc cgcgaaagga ggtcgctgag ccaggtcagg
     4921 cggacgccgg cgaccacaac accagcaaaa ctgccgtcag catggttcag gcgccggctt
     4981 attggaattg aggcgtgctg ggttggtgcg gtggcgaacg gccggccgat tatgacaacg
     5041 tcggctgggt ttagccggtg atcctgaaaa taatcccggc cagcgaagtt caccggccgg
     5101 gacacgttgg atcgtgggtc ggcgacgacg tcgcctgact cgttaaggac atttatgaac
     5161 caaatgtaac tcgacgtcaa tggtaaatcg atcagcggta agtgcggagg ttccgctccc
     5221 ggcacgccgg gcggcagcgg cctggtggcc tcgcgcagag tcaggtcgta cacggccata
     5281 tcgctgtcga tctggcgcgc cagggcgtcc gccttgcccg acagctggcg ggctgcttcc
     5341 tgcgtggcgt ccgcccgggc ggtaaaatcg aaatagatgg caacggcgag gcaggcgaga
     5401 cttgtcagca gaccgacgcc aatcgcccag ggtagggcag tgcgaagttg cgggagacgc
     5461 attgaggggt tttcccggtt ggtccgcgga gactgaccgg aaatcgctga ggaagtgttg
     5521 acggcgatgc atctgattgt tgggcacgcc ggccagagat gccggcaatc cggtcactcc
     5581 cggcgtggcg atgaattcca gaagtggcgt tgaccgcgtt cccgggaacg tgccgggggg
     5641 ctcggcgatc ggtcaggcat agtccgctgc tcgggtcatg tcgtgtgctt tgtccggcac
     5701 gactgcgttg aacaccagcg acagcacagt cgccaccgcg atgttcagga ccagcgtcgc
     5761 gagcgcggtg tagcaaggaa acgtcgtgcc caggaagtga agcggataaa tcggggcgta
     5821 tttattgtcg atgaccatcc aggtccccac accgaagccg gcgagccaac ccaggaacaa
     5881 cgcccacccg tgatagaacc gtgtgtatag cccgatgatc accgacggca ctgtctgcac
     5941 gatccacacg ccaccaagca gctgcagcca taaagcgtat tgtagtggca cgaagaagat
     6001 gaatatcaat gcgccggcct tgatcaccag cgaaacgatc ttggccatcc ggctttcctg
     6061 ctgatccgtg caattcggat tgatgaactc gcgatacaca ttgcgcgtgt aagtgttggc
     6121 ggtcgcgatc gacatgatcg ccgccggcac cagagcgcca atcgcgatcg ccgcgaacgc
     6181 cacgccgaca aaccaatccg ggaacatcgc catgaacagc gcgggcacgg aaaagttgtt
     6241 gctgtacgcc ttaaaccccg gcgcgaattg cggcatcgtc gccacgccga tggcgatcgc
     6301 catgaatccc accagcgcca gcaatcccaa catcaatgaa taggacggca gcatcgccgc
     6361 attgcgccgc accactcggc cactggagga actcaaaatt ccggtgatcg aatgtgggta
     6421 aaggaacaag gcgcaggccg aacccagtgc caaggtcgca taagcgctga aactgcccca
     6481 gctgttgccg gtcggcgccg cgagcagcag cttcgcgggc gggattgccg caaacatcgg
     6541 tccgaagcca cccagatgaa cggggaccgc aatgatggcg gcaaacacgg taatatagat
     6601 cagcgcgtct ttgacgaccg cgatcatcgc cggcgcgcgc agtcccgaac tgtaggtgaa
     6661 tgcagccagg ataacaaatg ctatgatcaa tggcaggtct ccgaagaatc cggaggtttc
     6721 gatgcccatt gcaccgatca ccacctgcat gccgaccaac tgcagtgcaa tatagggcat
     6781 cgtcgccagg ataccggtga acgcgatcgc cagcgccagc cagcgattgc cataacgccc
     6841 gcgcacgaaa tcggcagcgg tcacgtagcc gtgcttgtgg cagaccgacc ataagcgagg
     6901 gaaaatcaaa tagagcagcg gatagatcat caccgtgtac ggcaccgcga aaaatccgat
     6961 cgctccggcg ccgaacagca acgccggcac cgcgatgaac gtgtaggcgg tgtagagatc
     7021 gccaccgatc aggaaccatg tgacgatggt gccgaagcgg cggccgccga gaccccattc
     7081 gtgcaactga tcgagatcgc cgcgacgcca gcgcccggcg aaaaacccaa ggatcgtgat
     7141 caccgcaaac aaaaacacga agacgatgag cgcggtcgga ttgagcggca tggctcagcg
     7201 ctccacggcg tatacgagcg cgatcaatgc agcaccgatc aggatccaca gcaattgata
     7261 ccaataaaag aagggaatgc ccgcgagcat cggctcggtg ctattataag acgacaccca
     7321 tagcattgcg atgaacggca gaaccaacag cagcctggcc cacaggacgg tccgcaccgg
     7381 ccggtgttct tcgttatggt cggacattct gtccctcccc cgaatcattt gttccatcgt
     7441 ggcgcgtttt accctgggcg taaagttgtc gggcctggta tcggagtatc cggtgtgggg
     7501 acagtctgga tgcagggcca accgaggcgt tgggctggac gaattggccg gaacagaaat
     7561 tcctgccggt gcaacggtca tttgatgcct tcttgtcagc ttttgcgtgt aagcaacggg
     7621 cctgagccat gccggttcgg gggcatttca atatttggtc caccgatttg acgtggcgca
     7681 cgaaacaccg agcaaaacag tcgttctctg aggagcgtag ccatgtcggg aagcagttca
     7741 accgtcgcgc agcaacgcgt ctgggccagt tctggaacga cctataattc cttgccgaaa
     7801 ggttaccggc cgattcttgt gccgagtgag gcaaatatcc ggatgttgtg ggaaaaagcc
     7861 aataccaacg cccaggcggc actgggcatt gcgaaaacgg tgggcaagat ggctttgcgc
     7921 gccgcaccgg gggccacgac gctggcgctc ggggtcacgg ctccgattgg cgcggtgttc
     7981 gacatggtga tcgacggcaa agccgcactt tccaccagcc ggcacatcga caagctggtg
     8041 gagacggagc tcgggaaatg ctcgtgcggc tactgcgagg agatggtcga atacgtgttg
     8101 cgcaaaaagg gctccaaact cattcgccgc ggcactcggg cggcaaccgg tatcatttcg
     8161 ggcggcacgc tgatcaccat cggtgagaag ttgaagggga tgtacaagat ggccatgggc
     8221 acgcgtggcg tgaaccggga agcacacgcg gttgtgcttt gggtaaccgc caagaatggc
     8281 tgtcagtgtg cacaggatat tacggcggaa ctggttggca gcccgtccac gatgatcgcg
     8341 acgctcaata attatgaggg c
//
LOCUS       DATAVD010001348         2903 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_688030, whole genome shotgun sequence.
ACCESSION   DATAVD010001348 DATAVD010000000
VERSION     DATAVD010001348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2903
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_688030"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..554)
                     /locus_tag="VHX39_25830"
     CDS             complement(<1..554)
                     /locus_tag="VHX39_25830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994609.1"
                     /translation="MLRSFEQLCQTANPDLLVAADDEYAAVAGSGEYAMPWHWHDCLR
                     FILPSRGTIELKHEAGRAGTWLSQDRFAVVPPGRPHETRAGIGAHSHIALYVTDPILD
                     RLDTEIGSLSEFRRRTRSTAFFQRTSKLRTLQELSTRPEKAAYGHSRIRHGVSSALLV
                     QCIAGVMTGEAVPGTTHRDHGMML"
     gene            922..1863
                     /locus_tag="VHX39_25835"
     CDS             922..1863
                     /locus_tag="VHX39_25835"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3994610.1"
                     /translation="MTDTNLRNFDLNLLVVFDSVYSAGNISHAAKQLSLTQPAVSNAL
                     ARLRERFDDPLFVREGRNMKPTLRSRQMIGAVRDALQLVRRQLGEEAAIDLATYKRLF
                     RVVILDALEPFLVPPLANAIDASAPGITIDSRPAGSTHVVNELIGGTLDVAFYTYQAS
                     APGVIMVPVCPVEAVVVARRDHPRIRGKLDVETFMACGHVTFINEMKSLSNIERDIAH
                     GAGARRVPFMANTLWSIAAIAGKTDLLGILPRRLAEELASGFNLAIHAPPAKIAEQHL
                     YMMWHERNQDDIGHRWLRQLLTEAAQATFGEAPKAAS"
     gene            2108..>2903
                     /locus_tag="VHX39_25840"
     CDS             2108..>2903
                     /locus_tag="VHX39_25840"
                     /inference="COORDINATES: protein motif:HMM:NF013955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IPT/TIG domain-containing protein"
                     /protein_id="HEX3994611.1"
                     /translation="MRRRFVPADRTALCSRVDRSVPAPPGFFRPLGAVALLVMGVLLM
                     APGVAHAQAPTVASTSPGGSPAGATHSLQINGTNFTSPATVTVGGVSATSVTLTDSEN
                     IIAVTPALAAGDYDVVVTTTGGSGTAPIQYEFVVPPTITAAYVPASITTAGSSTLTLT
                     INNPNKHFAFAGGAVSAAALPPGLTGSGAATTCNSGTATLSGGSLSLSGALLAAPNGT
                     CTVTVSVSASTPNTYAAYTTGTVSGTNVSTYTGTTATTPTGLTVTAV"
BASE COUNT          516 a          903 c          906 g          578 t
ORIGIN      
        1 atcagcatca tgccgtgatc gcgatgcgtg gtgccgggca cggcctcgcc ggtcatgact
       61 ccggcgatac attgcaccag cagcgcggaa gacacgccgt ggcggatgcg tgaatggccg
      121 taggcggctt tttccggccg cgtcgatagc tcctgcaatg tgcgcagctt ggacgtgcgt
      181 tgaaaaaacg cggtcgagcg tgttcgccgg cgaaattcgc tcagcgagcc gatctccgtg
      241 tcgagcctgt cgagaatcgg atcggtgaca tagagggcga tgtgactgtg cgcgccgatg
      301 ccggcccgcg tctcgtgcgg ccggccgggc ggcaccaccg caaaccgatc ctgggaaagc
      361 cacgtgccgg cccgcccagc ttcatgcttg agctcgatcg ttccgcgact gggcaagatg
      421 aacctcaggc aatcgtgcca gtgccacggc atggcatatt cgccgctgcc cgccaccgcc
      481 gcgtactcgt cgtcagcggc taccagcaga tccggatttg cggtctggca cagctgttca
      541 aatgacctca gcatttcgat gcccaaatgc gatgacgcag cttagcagcg gcccctgcat
      601 ctgggcaacg aatgttgcga gcagccctcg gaccagacgc acgcgcgttg tttctaaagg
      661 acttttctgg aacttggctg gggttcatca atgcgttcag aactgtctgg gttttgttgg
      721 gctgggttga gtgtcggacg gttctcaaca ctgcgcgcga agcatttcgt tgcagaatat
      781 ctgattataa attctgtgaa tgatcaaatt cgccttcaca cggatttagg attgaaatgg
      841 tatcgatagc agtcggtgcc ggtttcgtgt attttcctac tgaatagtta ttgttcgagg
      901 cagcttcgag gtccgagatt tatgaccgac accaatcttc gaaacttcga cttgaatctg
      961 ctggtcgtgt tcgactcggt ctattcggcc ggcaacatca gccacgccgc aaagcagctt
     1021 tcgctgacgc aaccggccgt ctccaacgcg cttgcacgtc tgcgcgagcg ttttgacgat
     1081 cccctgtttg tgcgggaggg acgcaacatg aagcccacgc tgagatcgcg gcaaatgatc
     1141 ggggcggtcc gtgacgcact ccaactggtg cggcggcaac tcggcgaaga ggctgccatc
     1201 gaccttgcga cctacaaacg cctgttccgt gtcgtcatcc tggatgcgct ggaaccgttt
     1261 ctggtgccgc cgctggcgaa cgcgatcgat gcgtcggcgc cgggcatcac gatcgacagc
     1321 cgcccggctg gatcgacgca cgtcgtcaac gagctcattg gcggcacgct cgatgttgcc
     1381 ttttatactt atcaggcaag tgcgccgggc gtgattatgg ttcccgtttg cccggtcgaa
     1441 gcggtcgtgg tcgcgagacg cgatcatcca cgcattcgcg gcaagctcga cgtcgagacc
     1501 ttcatggcgt gcggtcatgt aacgttcatc aacgagatga agtccctgtc caacatcgaa
     1561 cgcgatatcg cacacggcgc cggcgcccgc cgtgtgccct ttatggcgaa cacgctgtgg
     1621 tcgatcgccg ccatcgccgg gaaaaccgac ttgctcggca tcctgccgcg tcgcctcgcc
     1681 gaagaactcg cctccggctt caatctcgcg atccacgcgc cgccggcgaa gattgccgaa
     1741 cagcatctct acatgatgtg gcacgagcgc aaccaggacg acatcggcca ccgctggctc
     1801 cggcagctcc tgacggaagc cgcgcaagcc acgttcggcg aggcgccgaa ggcggcctcc
     1861 tagaatcatt cacggcggtg atgcagagga tcgcggcggc ccgcctgttg gcggtcgaag
     1921 gagtgcggcg cctgtaaacg ctgccgatcg aagcattcac cgcattgata gtgcgctatt
     1981 ccaaaaggaa atttttcgcg cgtgaagccg ggctctatga gttgggcggc gaccggcggt
     2041 ttgcaacccc ggcgtcgagg gggtggggct cgtgcgtttc ggttttggat ctcgagcgtc
     2101 gttggcggtg cgtcggcgct ttgtgccggc ggatcggacg gcgctgtgca gccgcgttga
     2161 tcgatcggtc ccggcaccgc ccggtttctt ccggccgctc ggcgccgttg ctctcctggt
     2221 catgggcgtg ctgctcatgg cgcctggtgt ggctcatgca caggcgccga cagtcgcatc
     2281 gacatcgccg ggcggctcgc cggccggtgc gacgcatagc ctccagatca acggaacgaa
     2341 tttcacctcg ccggccacgg tcacggtggg cggtgtgtcg gcgacttccg tcaccttgac
     2401 cgactccgaa aatatcattg cagtgacgcc cgcgctggcc gcgggtgact atgacgtcgt
     2461 ggtgaccacc acgggtggct ccgggacggc cccgatccag tacgagttcg tcgtgccgcc
     2521 gaccatcaca gcggcctatg tgccggcctc gatcaccacc gccggctcat cgacgctgac
     2581 gctgacgatc aacaatccca acaaacactt cgcttttgcc gggggtgcgg tcagcgcggc
     2641 ggcgctgccg ccgggcctga caggctctgg tgctgccacg acctgcaata gcgggacggc
     2701 gacgctgagc ggtggcagcc tgagtttgtc gggcgccctt ctggccgctc caaacggcac
     2761 ctgcaccgtc accgtgagcg tatcggcgag cacgccgaac acttatgccg cctacaccac
     2821 cgggaccgta tccgggacga atgtcagtac atataccggt acgacagcta cgacgccgac
     2881 cgggctgacg gtgacggcag tgc
//
LOCUS       DATAVD010001349        10770 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_501368, whole genome shotgun sequence.
ACCESSION   DATAVD010001349 DATAVD010000000
VERSION     DATAVD010001349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10770
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_501368"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2176
                     /locus_tag="VHX39_25845"
     CDS             <1..2176
                     /locus_tag="VHX39_25845"
                     /inference="COORDINATES: protein motif:HMM:NF037016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HEX3994612.1"
                     /translation="VTVSEALDLVSVNSPANYSLLKADSNGQFNTTGATVIPVIPVYV
                     LGSTAVTLELPNGVLAAGEYQLTLSGTRAIFDQSGNALAGNGTTAGTNYVTVFTINRS
                     SDIAPVATPQTVSVAEDGSVQVVLAATDTQGNKLTYSVVGAPVDGMVSAITNGNTLIY
                     TPVANFYGTDKFTFLATDPDGESSQAAVSITVTPVDQAPVAIAQSVGVIHDAPQIIVL
                     GGSDAETPASQLAYTIATQPAHGTLVRVIGSSDAFTYTPASGYLGADSFSFTVTDTGN
                     PPGNMANAKTSAPATVSVTVVDPAPVGVADSYTTRAGVALNVPVAQGVLVNDTDAAGD
                     ALTATLGTSVAHGTLALNSNGSFSYTPAATFTGSDSFTYLPHGTYVTGGATSVTISVT
                     GGIAPPPPPGKKGGAAPPAPPLPAGSSGDVGGGGGVTEAALVAAPQTPVTTTASQPTT
                     DDDFVVEAASADVTSDSSPLPPSTAATPATDSTVLLSMPVEPTTRSDVPSQSVTASSA
                     GANVSAAVTPVAHLIKSAARGAWVVPEAIASPPTLLPFAPDLHVMALAEQGTPAIVLV
                     ASAADQPQTQVATDDVPASDDSALAPMSVAAVTTQATVVAASTPAFWMDDTAVLMAVS
                     DPIVLPSFTLPGDETSALMLPAAPEISHLPQDFAAAVRRLTERAPAIVTFVDPVTGQL
                     VNPAFPQTMQPVKEQAWLLVDTDPDDNLGALSSRIRWDSHPI"
     gene            2191..2517
                     /locus_tag="VHX39_25850"
     CDS             2191..2517
                     /locus_tag="VHX39_25850"
                     /inference="COORDINATES: protein motif:HMM:NF023376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3467 domain-containing protein"
                     /protein_id="HEX3994613.1"
                     /translation="MADDTDDTAREPSPVDVTIAEQVVNTKVNWDDSKMVTTFANVVN
                     VLVTREELTLLFGMNQTWNASQAKELTVQLSNRIVLTPYAAKRLLTLLTARMRDYESR
                     IGPITL"
     gene            2537..4396
                     /locus_tag="VHX39_25855"
     CDS             2537..4396
                     /locus_tag="VHX39_25855"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEX3994614.1"
                     /translation="MERENQTEPEAGTVTPLDQALWSVLTAESAPAPFSRAWLALLCR
                     MLPGAARAVLVLRQDGALAPIARWPEGDPGSAQLAHVAELALTERRGVVSRPGGRAPG
                     HSASRVSHLGFPLLFGGEDQGVVAVELEGVGDAALRDAMRQLQWGASWIELRQLRVQS
                     VDDAARLRQGYAALEVAATTLAADRFDAAARATATEMALRLRASRVAIGWVTRRSIRV
                     AGLSHAVGSGKRADVTVNLTAAMDEAVDQGASLLFPLHDGEALPSRSAHARLVAQGAG
                     PYVLTVPLTTQGRIAGAITVERDEPIDQDAIDLTEAIAALVGPVLGQLRLGERWLTTI
                     AFHIFTRTARQLLGPEHYVLKLATGVIFTVIAFFSLFHTEYHVNAQAMVEGEVRRSIA
                     AGLDGYIGSEHVRAGQVVHAGDVLATLDDSELNLQRLRWIATRQQHQSELDRALATGT
                     RADVNIDGAQIAEAAAEIALLDAQLARTKIVAPFDGLITNGDLSQSVGMPVQRAQVLF
                     EIAPLDSYRVIIRVPDSDIGRVAPGRLGTLVLSALPDRHFDLHVVRVTPIAEQSDGAN
                     TFRVEARLDDISPQLRPNMEGVAKIDAGRHLLIWAWTHHLIDAIRLTLWSWWP"
     gene            4393..6549
                     /locus_tag="VHX39_25860"
     CDS             4393..6549
                     /locus_tag="VHX39_25860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994615.1"
                     /translation="MSTSGKPLLSAQWFRVAAVRPRLRDHVRITRQHFRGERWFVLED
                     LVENSVHRYAPAAQAAIGMMDGTHTLDDIWTSLAGLAEERPTQDEMIHLLAQLDGANL
                     LATERLPDFSELSLRAHRLASNKLWRRLANPLYLRIPLCDPDRFLDATVGLARPLWSV
                     WGFLLWLGVVGWGVLQAVLHWTELTHDLADRVLAHDNLLILAVTFPVLKLLHELGHCY
                     AAKIGGASVHEAGVMTLVVMPVPYVDVSPASAFTNKWRRALVGVAGMLTELFCAGLAM
                     IVWTNVEPGLARAAAFNCLLIAGVSTLLFNGNPLLRFDAYFILSDLIEIPNLGTRAVR
                     YYGYLVNRYAFGMRGQTSPVQARGEAPWFAFYGVASYVYRIWVMLSVAVFVASQMHGV
                     GAVLAAWTVLSGIVYPLISGVWKVVNGPALHQHRLRAIMVTGGAVACVALLLFGVELP
                     YGTMTQGVVWAPAGADVRAGAEGTLTELIAAPGAALTAGTPVARMTDTVLDARVQLLA
                     TQLREVELRYNAAEGVDRVQTQMLRQQIGYFRSQLDEMRSRRRALAVTAPVDGRFLVA
                     MPRDLDGKFVRRGELIGYVLNDDAASVRVIVPQSEIELVREDTRGVDLRFASRPMRMI
                     HVRRISREVPTATRQLPSVALASVGGGPIAVDPTDEQHLRALEEVFQVDVKLPDGLRD
                     HRIGERVYVRFQHGNRTLAWRISRTARQLFLRRFDL"
     gene            6546..8531
                     /locus_tag="VHX39_25865"
     CDS             6546..8531
                     /locus_tag="VHX39_25865"
                     /inference="COORDINATES: protein motif:HMM:NF019156.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994616.1"
                     /translation="MSTTTIPVVPALRLARAVPYPERYPRPRGVVEEHLRAAAALLPG
                     PPQALWRFGGRRVARLAAGYADEAATGAPDVAAAALRVRLRGGISSDSAARAFALIRV
                     LATRHLGMTPYDVQLMAAWSMLRGHMTELATGEGKTLAASLAAATAALAGRMVHVVTV
                     NDYLAERDHGQLSPLYGALGLTTGLVIHGQTPAERRAAYACDIVYASNKELVFDYLRD
                     QMHRRSTLTALHGRVARLDGRRGHEDALVMRGLDFAIVDEADSVLIDEARTPLIISET
                     LSDAVRDDVCVEALDLVAGLTEGVDFTIDRSERRIDMTAGGRRRVELLSGSLGEHWGS
                     TLVRSELVVKALTARLLFERDVHYLLREGKVCIIDEYTGRVMADRFWNDGLHQMIEAK
                     EGCAPSGQRASVARITYQRFFTRYQHLCGMSGTLAEVTRELRSVYGVGVIRIPTHHPG
                     RRRVEKVQIVPTAEAKWRAIADHAVRLSAMGQPVLIGTRSVAASELASDLLRGHGVAH
                     NLLNAAQDAAEAAIVARAGEAGCVTIATNMAGRGTDIRLAPGVSERGGLAVILSDRHD
                     AARIDRQLAGRGARQGDAGSFTQVLSLEDALMDPLRSNPAGRLLLTVARGHRLVACGL
                     FLIMQHRAERRHRIVRRELMRFEARLQGSLSFAGRPD"
     gene            8532..9359
                     /locus_tag="VHX39_25870"
     CDS             8532..9359
                     /locus_tag="VHX39_25870"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX3994617.1"
                     /translation="MRGSNVLLAWLFVAAVPAWAESDTASGTCIIKPHIQIQLGSAIS
                     GMLSETLVDRGDEVKRGQVVARLESSVEQSTLALDRMRASNDEAIKGAQVDRELRVRE
                     ADRKKSLVDKGIDNQNSLDELQTKVREGDLAIRQAQMDQRLAALTADRSERALALKQI
                     HSPIDGVVIERKLSVGEYIYEQTSIMTIAQIDPLNVELVLPMDQYGQIVVGSTAIVHP
                     VAPVGGAYVAKATVIDPVIDAASETFGVRLMLPNPKHAIPAGIRCSVEWQDVKQVSR"
     gene            9424..>10770
                     /locus_tag="VHX39_25875"
     CDS             9424..>10770
                     /locus_tag="VHX39_25875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994618.1"
                     /translation="MVQTTFSVGNAGSLTTVLQEISGGGADAAINTAYTIAMTAGVSL
                     SAGVNLEAGSSLLLEGSFPFIVPGFTATGTVVTDLNLTGTVILDNGLLDNPELVIVSG
                     TTVAGLFSGTVLGTSGDAGDSANNNGIIQSGGPYAAVEFNSGNVLNGWNGSPSALIAG
                     VPAGVDLVISGLVQNGGTIIGTGPDSVAVSMGAGTVDNGQIGEALALLSGGMNGVVIQ
                     GAGVVNNDGLIFGAVSDAVYIGSGTVTNGQIGGASALIDGGPSGNGVGVASGLGTVAN
                     FSTIIGGGAAGVYLKAGGTVTNGAASDSAAVISGAAEGVLLLHATGLLQNYGTVLGDG
                     SDAAQSVVGAFFYSGGTIENVTNMALIGGLEWGALVEFGAGFVSNAGTIDATAALGFG
                     VDLTAGGTVVNMAGATISGPYDGVRVSAGVAGSGAVVMNDGTILGSVGVDFQSGATE"
BASE COUNT         1782 a         3093 c         3816 g         2079 t
ORIGIN      
        1 ggtgacggtc agcgaggcgc tcgatctggt cagcgtcaac agcccggcga actacagtct
       61 gctcaaggcc gatagcaacg gtcagttcaa cacgaccggt gccacggtga tcccggttat
      121 tccggtctac gtgcttgggt ccacggcggt gacgctggaa ctaccgaacg gcgttctggc
      181 ggcgggcgaa taccaactga cgctgtcggg cactcgagcg atcttcgatc agtccggcaa
      241 tgcgctggcc ggcaacggca cgacggccgg caccaactac gtgacggtct tcaccatcaa
      301 ccgatcgagc gacatcgcgc cggtcgcgac acctcagacc gtttcggtgg cagaggacgg
      361 atcggtacag gtcgtgctgg cggcgaccga cacgcagggg aacaaactga cctacagcgt
      421 cgtcggcgcg cccgtcgacg ggatggtttc ggcgataacc aacggcaaca cactgatcta
      481 tacgcccgtc gccaatttct acggcaccga caaattcacc ttcctggcca ccgatccgga
      541 tggtgagagc agccaggccg cggtgtcgat tacagtgacc ccggtggatc aggcgccggt
      601 ggcgattgcg caaagtgtgg gtgtcattca cgatgcgccg caaatcatcg tgctgggcgg
      661 ctccgacgcg gagacgccgg cgagtcagct tgcctacacg atcgcgacgc agcctgcgca
      721 cggcactctg gtgcgggtta taggcagttc cgatgcgttc acctataccc cggcttcggg
      781 ttaccttggg gcggatagct tcagcttcac ggtgaccgat accggcaatc cgccgggcaa
      841 catggccaat gccaagacca gtgcgccggc gacggtgtcg gtgaccgtcg tcgatccggc
      901 accggtcggc gtggccgaca gctacacgac gcgtgcgggc gtggcgctga acgttccggt
      961 ggcgcaaggc gttctggtga acgacaccga tgccgccggt gacgcgctga cggcgacgct
     1021 gggtacgtcg gtcgcgcatg ggacgttggc gctgaacagc aacggatcgt ttagctacac
     1081 gccggcggcg acgttcaccg gctcggattc tttcacctat ttgccgcatg ggacttatgt
     1141 gacgggcggt gcgacctcgg tgacgatcag tgtgaccggc ggtatcgccc cgccgccccc
     1201 gcccgggaag aaggggggtg ccgcgccgcc ggctccgccg ctgccggccg gttcgagcgg
     1261 tgatgtggga ggcggtggtg gtgtgacgga ggcggccctg gtagccgcgc cgcagacacc
     1321 tgttacgacg actgcctcgc agccaacgac cgacgacgat ttcgttgtag aggcggcttc
     1381 cgcagacgta acgagcgatt catcgccgct gccgccttcg acagccgcga cgccggcgac
     1441 cgactccacc gtgctgctgt cgatgcccgt cgaaccaacg acgaggtccg atgtgccgag
     1501 ccagtctgtt acggcgtcgt cggcgggcgc aaacgtttcg gcagcggtga ctccggtcgc
     1561 gcatctgatt aaatccgcgg ccaggggcgc ctgggttgtg cccgaggcaa ttgcttcgcc
     1621 gcccaccctt ctgccgttcg cgcccgacct gcacgtgatg gcgctggcgg aacagggtac
     1681 gccggccatc gtgttggtgg cttcggcggc cgatcagccg caaacacagg tggcgactga
     1741 tgatgtcccg gcttcggacg actcggctct ggcaccgatg tccgttgccg ccgttacgac
     1801 ccaggcgacc gttgtggcgg cgtcgacgcc ggcgttttgg atggacgaca cggcggtcct
     1861 gatggcggtg tcagacccga tcgtgctgcc gagtttcact ctgccgggtg acgagacgtc
     1921 ggcgctgatg ttgccggcgg cgccggagat atcgcatctg ccgcaggact tcgcggcggc
     1981 ggtgcggcgg ctgaccgaac gagcccccgc gatcgttacc tttgtcgatc cggtcactgg
     2041 ccaactggtg aatccggcgt tcccgcagac catgcagccc gtgaaggagc aggcgtggct
     2101 gctggttgat accgaccccg atgacaacct tggcgccctg tcatcgcgca tccgctggga
     2161 cagccacccg atatgattca ggagaacgaa atggccgatg acaccgacga caccgcgcgc
     2221 gaaccatccc ccgtcgacgt gacgatcgcc gagcaggtgg tgaacacgaa ggtcaactgg
     2281 gacgatagca aaatggttac gacctttgcc aacgtggtga atgtgctggt gacgcgtgag
     2341 gagctcacct tgctgttcgg catgaaccag acgtggaacg cgtcgcaggc caaggaactg
     2401 acggtgcagt tgagcaaccg catcgtgctg accccctatg ccgccaaacg gctgctgacc
     2461 ctgctgaccg ctcggatgcg cgactatgag tctcgcatcg gtccaataac gttgtagcac
     2521 gctggaacgg tccgcaatgg agcgcgaaaa ccagacagaa ccggaggccg ggaccgttac
     2581 gccgctcgat caggcgttgt ggagcgtgtt gacggccgaa tcagcaccgg cgccgttcag
     2641 ccgggcctgg ctggcgctgc tatgccggat gctgccgggt gcggcgcgcg cggtgctggt
     2701 gctgcgtcag gacggcgcgc tggcgccgat cgcgcggtgg ccggagggcg atccgggatc
     2761 ggcgcaactg gcgcatgtcg cggaactggc gctgaccgaa cggcgcggcg tggtgagccg
     2821 ccccggtggg cgcgcgcccg ggcacagtgc aagccgtgtt tcgcatctgg ggttcccgct
     2881 gttgttcggg ggtgaggatc agggcgtcgt cgcggttgag ttggagggtg tcggcgatgc
     2941 ggccctgcgg gatgccatgc ggcagttgca gtggggcgcg tcgtggatcg aactgcgtca
     3001 gcttcgggtt cagtcggttg atgatgccgc gaggttgcga caaggttatg cggcgttgga
     3061 ggtcgcggcg acgacgctgg ccgccgatcg gttcgatgca gcggcgcgag cgaccgcaac
     3121 cgaaatggca ttgcgcctgc gagcgtctcg ggtggcgatc ggatgggtga cgcgccggtc
     3181 cattcgtgtc gccggcctgt cgcacgcggt gggttccggc aagcgggcgg acgtcaccgt
     3241 caatctgacc gcggcgatgg atgaggcggt ggaccagggt gcatcgttgc tgtttccgtt
     3301 gcacgacggc gaggcgctgc ccagtcgttc ggcgcatgcc aggctggttg cccaaggtgc
     3361 cggcccgtac gttctgacgg ttccgctgac cacacagggc cgcatcgccg gcgcaatcac
     3421 ggtggagcgc gatgagccga tcgatcagga tgcgatcgat ctgaccgagg ccatcgcagc
     3481 cctggtcggg cccgtgcttg ggcaactgcg cctgggtgag cgctggctga caaccatcgc
     3541 cttccacatt ttcacccgca ccgcccgcca actgctgggc ccggaacatt acgttctgaa
     3601 gcttgccacc ggcgtcattt tcaccgtgat tgcgttcttc tcgctgtttc acacggaata
     3661 tcacgtcaat gcccaggcga tggtggaagg cgaagtgcgg cggtcgatcg ctgccgggct
     3721 ggatggttac atcggtagcg aacatgtccg ggcgggacag gtggtgcatg cgggcgatgt
     3781 gctggcgacg ctggatgact ccgaactgaa cctgcaacgg ttgcgttgga tcgcgacccg
     3841 gcagcagcat cagtcggaac tcgaccgtgc gctggcaacg ggcacgcgtg ccgatgtcaa
     3901 catcgacggg gcgcagatcg ccgaggcagc cgccgaaatc gccctgctgg atgcgcaatt
     3961 ggcgcgcacc aagatcgttg cgccgtttga cgggctgatc accaacggcg acctgtcgca
     4021 gtctgtcggg atgccggtgc agcgtgcgca ggtgttgttc gagatcgcac cgctggacag
     4081 ctatcgtgtg atcatccgtg tgccggacag cgatatcggt cgggtggcgc cggggaggct
     4141 ggggacgctt gtgctgtcgg cgctgccgga tcggcatttc gatctgcatg tcgttcgggt
     4201 gacgccgatc gcggaacaaa gcgacggcgc caacacgttc cgcgtcgagg ctcggcttga
     4261 cgatatttca ccccagttgc gcccgaacat ggagggcgtg gcgaagatcg acgccgggcg
     4321 gcatctgctg atctgggcct ggacccatca cctgatcgat gcgatccggc tgaccctgtg
     4381 gtcgtggtgg ccatgagcac gtccggcaaa ccacttctca gtgcacaatg gtttcgtgtc
     4441 gcggcggtgc ggcctcggct gcgcgatcat gtgcggatca cgcgccagca tttccgaggg
     4501 gaacgctggt ttgtgttgga agatctcgtc gagaacagcg tgcatcgcta tgcgccggcg
     4561 gctcaggcgg cgatcgggat gatggatggc acgcacacgc tggatgacat ctggacgtcg
     4621 ctggcgggtc tcgcggagga gcggccaaca caggacgaaa tgatccatct gctggcacaa
     4681 ctcgatggtg ccaacctgtt ggcgaccgaa cggttgccgg atttttccga attgtccctg
     4741 cgggcacatc gcctggcgtc gaacaagctg tggcggcgcc tggccaatcc gctttatctg
     4801 cggattccgc tttgtgaccc ggaccggttt ctggatgcga cggttgggct ggcgcggcca
     4861 ttgtggtctg tgtggggatt cctgctgtgg ctgggggttg tcggctgggg cgtgttgcag
     4921 gccgtattgc actggacaga actgacccac gatcttgccg accgggtgtt ggcgcacgac
     4981 aatctgctga tcttggctgt gactttcccg gtgctgaaac tgctgcacga actcggccac
     5041 tgttatgccg cgaagatcgg cggtgcgtcg gtgcatgagg ccggcgtcat gacgttggtg
     5101 gtgatgccgg tgccgtatgt cgatgtcagt ccagccagtg cgttcaccaa taaatggcgg
     5161 cgcgcgctgg tgggtgtcgc cgggatgctg acggaactgt tctgcgccgg gctcgcgatg
     5221 atcgtatgga cgaatgtcga gccagggctg gcgcgagccg cggcgttcaa ctgcctgctg
     5281 atcgcgggtg tgtcgacgct gctgttcaat ggcaacccgc tgctgcggtt cgatgcgtat
     5341 ttcatcctgt ccgacctgat cgagatcccc aatctgggga cccgagcggt gcggtattac
     5401 gggtatctgg tcaatcggta tgcgttcggc atgcgtggtc agacgtcgcc cgtgcaggct
     5461 cggggcgagg caccgtggtt cgcgttttat ggcgttgcat cctatgtgta tcgaatctgg
     5521 gtgatgctgt cggtcgcggt cttcgtcgcg tcgcagatgc atggggtcgg cgcggtgctg
     5581 gcagcgtgga ccgtgctgtc gggcatcgtc tatccgctga tcagcggcgt ctggaaggtg
     5641 gtgaacggac cggccctgca tcagcaccgg ttgcgcgcga tcatggtgac cggcggcgct
     5701 gttgcctgcg tcgcgctgtt gctgtttggg gtggaactgc cgtacgggac gatgacgcag
     5761 ggcgtcgtgt gggcgccggc gggtgccgat gtgcgtgccg gcgcggaagg cacgctgacc
     5821 gaattgatcg cggcacccgg cgcggccttg accgcgggaa cgccggtcgc tcggatgacc
     5881 gacaccgtgc tggatgcacg tgtgcaactg ctggcgacgc agttgcgaga ggtcgagttg
     5941 cgctacaacg cggccgaagg ggtcgatcgc gtgcagacgc agatgttgcg ccagcagatc
     6001 ggctatttcc ggtcgcagtt ggacgaaatg cggtcgcgcc ggagggcgct cgcggttacg
     6061 gcgccggttg atggacggtt tctggttgcc atgccgcgtg acctggacgg caagttcgta
     6121 cggcgcggtg aattgatcgg ctatgtgctg aatgacgatg ccgcaagcgt gcgggtgatc
     6181 gtgccgcagt cggagatcga actggtgcgc gaggatacgc gcggcgtcga tctgcgcttt
     6241 gccagtcggc cgatgcgcat gatccatgtc cgtcggataa gccgtgaagt gccgaccgcg
     6301 acgcggcaat tgccgagtgt cgcgctggca agcgtcggtg gcggtccgat cgctgtcgat
     6361 ccgacggacg aacagcactt gcgagcgctg gaggaagtgt ttcaggtgga tgtgaaacta
     6421 cccgatgggt tgcgggacca tcgcattggc gaacgggtct atgtgcgctt ccagcacggc
     6481 aaccggacgc tcgcatggcg catttcccgc accgctcggc aattgttcct gcggcggttt
     6541 gatctatgag cactacaacc ataccggtgg tcccggcgtt gagattggcg cgggccgtgc
     6601 cgtatccgga acgttacccg cgcccgcgcg gtgtcgtgga ggaacatttg cgcgccgcgg
     6661 cggcgctgct gcccggtccg ccgcaagcct tgtggcggtt cggtggcagg cgtgtggcgc
     6721 ggctggccgc cggttatgcg gatgaagccg cgacgggcgc tccggacgtt gcggccgcgg
     6781 ctttgcgtgt tcgattgcgg ggtgggattt catcagattc ggcggcgcgg gctttcgctc
     6841 tgatccgcgt cctcgccacg cgccatctcg ggatgacgcc ctatgatgtg cagcttatgg
     6901 cggcgtggtc gatgctgcgc gggcatatga cggaactggc gacgggggag ggcaagacac
     6961 tggccgcctc attagccgcg gccaccgccg cgctggcggg ccggatggtg catgtggtga
     7021 cggtgaacga ctacctcgcc gaacgcgatc atggacagtt gtcgccgctg tacggggcac
     7081 tggggttgac caccgggttg gttatccacg gccagacgcc ggccgaacgt cgggcggctt
     7141 atgcgtgcga cattgtttat gcgagtaata aggaactggt gttcgattac ttgcgcgatc
     7201 agatgcaccg gcgttccacg ctgacggcgc tgcatggccg tgtggcccgc ctggacgggc
     7261 ggcgtggaca tgaggatgcg ctggtgatgc gcggtctcga tttcgccatc gtggacgagg
     7321 cggacagtgt gttgatcgat gaggcacgca cgccgttgat catcagcgaa acattgagcg
     7381 acgcggtgcg cgacgatgtc tgtgtcgagg cgctcgatct ggtggcgggt ctgacggagg
     7441 gcgttgattt caccatcgat cgcagtgagc gtcgcatcga catgaccgcc ggtgggcgcc
     7501 gtcgtgtgga attgctgtct ggaagtctcg gcgaacattg gggcagcacg ctggttcggt
     7561 ccgaactggt ggtgaaagca ctgacggcgc ggttgttgtt cgaacgtgat gtgcattatt
     7621 tgttgcgtga gggcaaggta tgcatcatcg acgaatatac cggccgcgtt atggccgacc
     7681 gtttttggaa tgacggcctg caccagatga tcgaggcgaa ggaggggtgt gctccgagcg
     7741 gccagcgcgc ttcggtggcg cgtattacgt atcagcggtt ctttacgcgc tatcagcatc
     7801 tctgcggcat gagcggcaca ttggcggagg tcacgcggga attgcgatcg gtctatggcg
     7861 ttggcgttat ccgcatcccg acgcatcatc ctggacgcag gcgagtggaa aaagtccaaa
     7921 tcgtgccgac cgcggaagcg aagtggcgcg ccatcgccga tcatgcggtg aggttgtcgg
     7981 cgatgggcca gccggtgctg atcggcacgc gatccgttgc ggcctcggaa ctggcgagcg
     8041 atctgttgcg gggccacggc gttgcccaca acctgctcaa cgcggcgcag gatgcggcgg
     8101 aggcggcgat tgtcgcgcgc gcgggggagg ctgggtgtgt caccatcgcc accaacatgg
     8161 ccggacgggg taccgatatc cggctggcgc caggtgtttc cgagcgtggc gggctggcgg
     8221 tgatcctgag cgaccggcac gacgctgcgc ggatcgatcg gcaacttgcc gggcgggggg
     8281 ctcggcaggg cgatgcggga tcgttcaccc aggtgctgtc gctggaggat gcgctgatgg
     8341 atccgttacg gtccaatccg gccggcagac tgctgctgac ggtggcgcgc ggacatcgcc
     8401 ttgtcgcctg tggtttattt ctgattatgc aacatagagc cgagcggcgg catcgaatcg
     8461 tgaggcggga attgatgcga ttcgaggcgc ggttgcaagg ctcgctgtcc tttgccggga
     8521 gacccgatta gatgcgcgga tcaaatgtcc tgctggcgtg gttgttcgtt gcggcagttc
     8581 cggcatgggc agaatccgat actgcctctg gcacgtgcat catcaagcca cacattcaaa
     8641 tccagctcgg tagcgcaatc agcgggatgt tgtcggaaac gctggtcgat cgtggcgacg
     8701 aggtgaagcg tgggcaggtc gtcgctcgac ttgaatcgag tgtggaacag tcgaccctgg
     8761 cgctcgaccg catgcgtgcg tccaacgacg aggcgatcaa gggcgcccag gtcgacaggg
     8821 aactgcgggt gcgggaggcg gaccggaaaa agtccctggt ggataaaggc atcgataacc
     8881 agaactcgct ggacgagttg cagaccaagg tgcgcgaggg cgaccttgcc atccgccagg
     8941 cgcagatgga ccagcgcctt gcggcactga ccgccgatcg cagtgagcgg gcgctggcgc
     9001 tgaaacagat acacagcccg atcgatggtg tcgtgatcga gcgcaagctg tcggtcggcg
     9061 aatatatcta cgagcagacg tccatcatga cgattgccca gattgatccg cttaacgtgg
     9121 aactggtgct gccaatggac cagtatggtc agatcgtggt cggatcgacg gcgatcgtgc
     9181 atccggtggc gccggtcggt ggtgcttatg ttgcgaaagc cacggtgatc gatccggtga
     9241 tcgacgcagc cagcgaaacg tttggtgtcc ggctgatgct gcccaatccc aaacatgcca
     9301 ttcccgccgg gatccgctgt tcggtcgagt ggcaggatgt gaagcaggtg tcccgatgat
     9361 ccgcgtttct accgatatcg gaatgatcta tgcggcgaat gcgccgtggg gagccagggt
     9421 ataatggtcc agaccacatt cagcgtcggc aacgccggca gtctcaccac ggtcctgcag
     9481 gaaatcagtg gcggcggcgc ggatgcggcg atcaacaccg cctataccat cgcgatgacg
     9541 gcgggcgttt cgctcagtgc gggcgtcaac ctggaggccg gatccagcct tctgctggaa
     9601 gggtcatttc cgttcatcgt gcccggtttc acggctaccg gaacggttgt caccgatctt
     9661 aatctgaccg gcacggtcat cctggacaat ggcttgctgg ataatccgga gctggtgatc
     9721 gtcagcggta cgaccgttgc gggactgttt tcgggcacgg tgctcgggac ctcgggcgat
     9781 gccggcgaca gcgccaacaa caacggcatc atccagtccg gcgggcccta cgccgcggtc
     9841 gagttcaata gtgggaacgt cctgaatggc tggaatggat cgccatcggc gctgatcgcg
     9901 ggggttccgg ccggggtcga tcttgtcatt tccggcctcg tgcagaatgg cgggacgatc
     9961 atcggcaccg gccctgacag cgtcgccgtt tcgatgggtg cgggtaccgt cgacaacggc
    10021 cagattggcg aggccctggc gctgttgtcc ggcggcatga acggtgtcgt gatccagggt
    10081 gcgggcgtcg tcaataatga tggcttgatc tttggtgctg tatcggacgc ggtctatatc
    10141 ggctctggaa ccgtgacgaa cggtcagatc ggaggtgcat cggcactgat cgatggcggg
    10201 ccttcgggca acggggttgg ggtcgcgtcc ggccttggga cagtggccaa tttcagcacc
    10261 atcatcggtg gcggcgccgc cggcgtgtac ctcaaagcgg gtggaacagt aacgaacggc
    10321 gcagcgtccg actcggccgc ggtgattagc ggcgcggctg aaggtgtgct gctgctgcac
    10381 gcaacgggat tgttgcaaaa ctacggcacc gtcctgggcg acggcagcga cgcggcgcag
    10441 tccgtggtcg gagcgttctt ctattccggc ggcacgattg agaacgttac gaacatggca
    10501 ctgatcgggg gactggaatg gggcgccctc gtggaattcg gtgccggatt cgtgtccaat
    10561 gcgggcacca tcgacgctac ggcggcgctg gggttcggtg tcgatctcac cgccgggggc
    10621 accgtcgtca acatggcggg tgcgacgatt tctggcccgt atgatggcgt gcgtgtttcg
    10681 gcgggcgttg ccggctcggg tgccgtcgtg atgaacgacg gaacgatctt gggatcggtt
    10741 ggggttgatt tccaaagtgg cgcgaccgag
//
LOCUS       DATAVD010001350         1650 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_688354, whole genome shotgun sequence.
ACCESSION   DATAVD010001350 DATAVD010000000
VERSION     DATAVD010001350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_688354"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..533
                     /locus_tag="VHX39_25880"
     CDS             <1..533
                     /locus_tag="VHX39_25880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994619.1"
                     /translation="VVALGTAAFAQHDAAPAAAKSEAQQSFATMKTLAGNWEGSVTLD
                     PPQPDMSDGKPVHVTMRVTSRGNALVHEMQEAGTPLDPKKYDHPVTMLYLDGDQLDLV
                     HYCDAGNRPRMIARASDGKRVEFDFADLSGSNQYGHMYHAVFTAVDPDHHTEDWTYMM
                     PGDKPMHAHFDLHRVQ"
     gene            571..978
                     /locus_tag="VHX39_25885"
     CDS             571..978
                     /locus_tag="VHX39_25885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015072405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX3994620.1"
                     /translation="MDREWNDNQPIYRQLRDRVVAMILDGVLKEGDPLPSVRTVAADY
                     RVNPLTVLKGYQQLVDEQLVEKRRGLGMFINAGARHLLLEGERQKFLEEEWPRIQATI
                     QRLGLKAEELMNGSDASRPAGKAVKPKTGEEER"
     gene            983..>1650
                     /locus_tag="VHX39_25890"
     CDS             983..>1650
                     /locus_tag="VHX39_25890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015072404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3994621.1"
                     /translation="MAYIEARGLRKSFGSTVALDGLNLRVEEGRILGLIGPNGAGKTT
                     ALNAILGLTPYEGELNVLGRDPWTQRDDLMRDVSFIADVAVLPRWARVSQLLEYVAGV
                     HPRFNRAKAEGFLAKTNIGRRRRVRELSKGMVTQLHLALVMAIDARLLVLDEPTLGLD
                     ILYRKQFYDALLNDYFDRRRTIVVTTHQVEEVQHVLTDLMFIDRGRIVLACSMEEFDS
                     RYAEV"
BASE COUNT          346 a          520 c          498 g          286 t
ORIGIN      
        1 ccgtggtcgc cctcggtacc gcggcattcg cccagcacga tgccgcgcct gccgcggcga
       61 aatccgaggc gcaacaatcc ttcgctacca tgaaaaccct ggcgggaaat tgggaaggct
      121 ccgtcaccct cgacccgccg cagcccgaca tgtccgacgg caagcccgtg catgtcacca
      181 tgcgggtgac ctcccgggga aacgcgctgg tgcatgaaat gcaggaagcg ggtacgccgc
      241 tggatccgaa aaaatacgat catccggtta ccatgcttta cctcgacggc gatcagcttg
      301 atctggtcca ctattgtgac gccggaaacc gtccgcgcat gatcgccaga gcttcagatg
      361 gaaagagagt ggaattcgat tttgccgacc tctccgggag caatcagtac gggcacatgt
      421 accacgccgt attcactgcc gtcgatcccg accaccacac cgaagactgg acctatatga
      481 tgccagggga caagcccatg cacgcgcact ttgacctgca ccgggtacag tgaaccagag
      541 cattttcgcg aggccgtaca ggaaactcag atggaccgtg agtggaacga caatcagccg
      601 atttaccgcc agttgcgcga tcgcgtagtg gcgatgatcc tcgacggcgt gctcaaggaa
      661 ggcgatccgc tgccttcggt gcgcaccgtc gccgcggatt atcgggtgaa tccgctcacg
      721 gtcctgaaag gctaccagca actggtcgac gagcagctgg tggaaaagcg gcgcggcctc
      781 ggcatgttca tcaacgccgg cgcccgccac ctgctgctcg aaggcgaacg gcagaagttc
      841 ctggaagaag agtggccccg catccaggcc accatccagc ggctcggcct gaaggcggag
      901 gagctgatga acggcagtga cgccagccgt ccggcgggca aagcggtcaa gccgaagact
      961 ggcgaggagg agcgctgaac tcatggcata catagaagca cgcggtctgc gcaagtcgtt
     1021 cggctcaacc gttgcgctcg atgggctgaa cttgcgcgtg gaagaagggc gcatcctggg
     1081 gctgatcggg cccaacggcg ctggcaagac taccgcgctc aacgcgattc tcggactcac
     1141 tccctacgaa ggagaactga acgtgctcgg gcgcgatccc tggactcagc gcgacgacct
     1201 catgcgcgac gtctctttca tcgccgatgt cgccgtcctg ccgcgctggg cgcgggtgtc
     1261 gcagctgctc gagtacgttg ccggcgtgca tccccgcttc aatcgggcca aagcggaagg
     1321 ttttcttgcc aaaaccaaca tcggccgcag gcgccgagtc cgcgagttgt cgaaaggcat
     1381 ggtaacccag ctgcatctcg cgctggtcat ggccatcgac gccaggttgc tagtgctcga
     1441 cgagccgacg ctcggcctcg acatcctcta ccgcaagcag ttttacgatg cgctgctcaa
     1501 cgactacttc gaccgcagac gcaccattgt ggtgaccacg caccaggtag aggaagtcca
     1561 gcatgtcctg accgatctca tgttcatcga ccgcggccgg atcgtgctcg cctgcagtat
     1621 ggaggagttc gactcacgct atgccgaagt
//
LOCUS       DATAVD010001351         5076 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_314500, whole genome shotgun sequence.
ACCESSION   DATAVD010001351 DATAVD010000000
VERSION     DATAVD010001351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5076
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_314500"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VHX39_25895"
     CDS             <1..184
                     /locus_tag="VHX39_25895"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEX3994622.1"
                     /translation="AAVSKAVMIAGTFPADSHDPVSYPFAVTKSGDTPEARALLQFLS
                     GPAAREVFVKRGFKVE"
     gene            186..875
                     /gene="modB"
                     /locus_tag="VHX39_25900"
     CDS             186..875
                     /gene="modB"
                     /locus_tag="VHX39_25900"
                     /EC_number="7.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015098 - molybdate ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HEX3994623.1"
                     /translation="MNLSADEWDAVRLTLIVAARAVGFGLPVAVVMAWLLARCRFPGR
                     SVLSAFVHLPLALPPVVTGWLLLILFGIRGPIGSLLFSWFDIRLVFTTAGASLACAVM
                     TFPVMVRAVRLSLEAVDPGMEQAARTLGAGRLDRLMNVTLPLASPGILVGGIVGYATC
                     LGEFGAVITFAANIPGQTQTLPLAIYAALQVPGGESKAAELSMVSLTLALVGLLLSEW
                     VSKRLNAALGR"
     gene            872..1954
                     /gene="modC"
                     /locus_tag="VHX39_25905"
     CDS             872..1954
                     /gene="modC"
                     /locus_tag="VHX39_25905"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein"
                     /protein_id="HEX3994624.1"
                     /translation="MSLSVRLRHRFPSVQMDMAFAVPSPGVTVLFGPSGAGKSTVILA
                     AAGLLRPDECRIEIDGLLLADTASGLWLPPERRRAGLVFQDAKLFPHMSVETNLRFGM
                     RRAPPGLVQFDDVVELLGIGGLLDRRPHTLSGGERQRVAIGRALLAQPHLLLMDEPLA
                     SLDAERKAEILPYLTRLKTALRLPVLYVTHSLDEVTRLADSLVLIDAGRVIGFGPVAE
                     VATRADLPLALRDDAGALLHCRVAEHDPVRELTLLDAGGTALWVPLLDAAVGKECRVR
                     IPAREVILAGRAPEAISLHNVVAGTVRKIAGDPARRAVMVEIALPEGALLARVTPDAI
                     ARLALSPEGPVLALIKSTSIEVLGNP"
     gene            2039..4393
                     /locus_tag="VHX39_25910"
     CDS             2039..4393
                     /locus_tag="VHX39_25910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3994625.1"
                     /translation="MNAPFDPSLQLTEKFAVGQPVSRKEDPVLLRGEGRYSDDLNVPG
                     QLYGVMVRSRVAHGVLLSVDTEAAREMPGVRAVITVADLDAAGIKNMPAAASKNRDGS
                     ATPRPPQRPLANGRVRYVGEPIAMVVAETSKQAKDAAEAVFADIDPLPAVTSASEAAA
                     DGAPLLHAEATGNVCLDFHYGDTEKVAAAFAQAAHVTKLESRNNRIVVCPMEPRSAIG
                     EYDAASDRMILRLGCQGVFGQRNLVSGILGIPVEKLRVLTGNVGGSFGMKASAYPEYI
                     CLLHAARSLGHPVKWTDERSESFMSDSHGRDHEMTAELALDASGKFLALRITGYGNLG
                     AWLNSATTIPPTMNTVKNIIGVYATPLIQVSTKCMFTNTTPVGAYRGAGRPEGNYYME
                     RLVETAAREMGIDRVELRRRNHIQPEQMPYRSPSGMLYDCGEFPTVMEKALRAANWDG
                     YAARQEATRARGKVRGRGIGHYLEVTADAGNEMGGIRFEADGTVTIITGTLDYGQGHA
                     SPFAQVLSARLGVPFEKIRLLQGDSDQLVAGGGTGGSRSMMQSGGAILEASDIVVERG
                     KQLAAQLLEAAVADIEFLHGRFSVAGTDLGIGIIDLAARARIAENLPEDLPRTLDVNH
                     IFKGVPSAFPNGCHVAEVELDPDTGIVEVVSYATVNDFGVLVNPMLVAGQAHGGIAQG
                     IGQALTERVVYDEDGQLLTGSFMDYGLPRASDLPSLGFESHPVPARTNPLGAKGCGEA
                     GCAGSLPAVMNAVVDALAEFGITHIDMPATPHRIWQAMQAAQGG"
     gene            4522..>5076
                     /locus_tag="VHX39_25915"
     CDS             4522..>5076
                     /locus_tag="VHX39_25915"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX3994626.1"
                     /translation="MLCSRWCLDRHADIFDSFLDKLRTKTEALKPGDPMDETSDIGAI
                     INEKQFRKVCGYVDDGLNRKDARLVFGGLPPKEGPLSEGYFAIPTVFADTSNDCRLAR
                     EEIFGPVLVAIPWRDEDDAIRMANDSHYGLAAYVWTHEIGSGLRAAHAIESGWVQVIQ
                     GLGHQPGHSYGGYKQSGIGREFSLE"
BASE COUNT          865 a         1385 c         1744 g         1082 t
ORIGIN      
        1 tgcggcagta tccaaggccg ttatgatcgc tggtaccttc ccggctgata gccacgatcc
       61 ggtgtcttat ccatttgcgg tgaccaaatc cggcgacact ccggaggcgc gcgctctgct
      121 gcaattcctg agcggtccgg cggcccgcga ggtgttcgtg aaacgcggct tcaaggtcga
      181 atgatctgaa cctttcggcc gacgaatggg acgcggtacg gctgacgctg attgtggcgg
      241 cgcgtgccgt ggggttcgga ttgccggtag cggtggtgat ggcgtggctg ttggcacgct
      301 gccgattccc cggacgttcg gtgctaagtg cgttcgtgca tctgccattg gcgctgccgc
      361 cggtcgtcac cggctggctg ttgctgatcc tgttcggcat tcgcgggccg atcggatcgt
      421 tgttgtttag ctggttcgat atcaggctgg tctttaccac cgcgggtgcc agcctcgcct
      481 gtgccgtcat gacatttccg gtgatggtac gcgccgtccg gctgtcgctg gaggcggttg
      541 atccgggaat ggaacaggcg gcgcgtaccc tcggtgccgg ccgcctggac cggctgatga
      601 atgttacgct gccgttggct tcgccgggca tcctggttgg tgggattgtt ggctacgcca
      661 cctgccttgg cgaattcggt gcggtgatca cctttgccgc caacattcct gggcagacac
      721 aaaccttgcc gctggcgatt tatgccgcac tgcaggtgcc gggcggcgaa tcaaaggcgg
      781 ccgaactatc gatggtgtcg ctgactctcg cgttggttgg actgttgttg tcggagtggg
      841 tcagtaagcg attgaacgcg gcgcttggcc gatgagcctg tcggttcggt tgcgtcacag
      901 gttcccttcg gtgcagatgg acatggcgtt cgcggtgccc tcgccgggag tgaccgtgtt
      961 gttcggcccg tcgggcgccg gcaagtcgac cgtcattctc gctgccgccg gcttgctgcg
     1021 gcccgacgaa tgccggatcg agatcgacgg cttgttgctg gccgacacgg catccgggct
     1081 gtggctgcca ccggaacgac gtcgcgccgg tctcgtattt caggatgcga aactgtttcc
     1141 tcatatgtcg gtcgaaacga acctgcggtt cgggatgcgg cgggcgccac ctggcttagt
     1201 acaattcgac gacgtggttg agttgctggg tatcggtggt ctgttggacc ggcgtccgca
     1261 tacgctgtcc ggcggcgagc gccagcgcgt ggcgatcggg cgagccttgc tggcgcaacc
     1321 gcatctgctg ctgatggatg agccgctggc cagcctcgac gctgaacgca aggctgagat
     1381 tttgccctat ctgacgcggt tgaagacggc gctgcggttg ccggtgctgt atgtcacgca
     1441 ttcgctcgat gaggtaacgc ggctggccga ctctttggtg ttgatcgacg ccggtcgcgt
     1501 gattggcttt ggtcctgttg cggaggtggc cacgcgcgcc gatttgccgc tggcactgcg
     1561 cgacgatgcc ggcgcgctgc tgcattgccg cgtggccgag catgacccgg tccgcgaatt
     1621 gacgctgctg gatgccggcg ggactgcgct gtgggtgccg ttgctggacg cggctgtggg
     1681 caaggaatgc cgggtccgta ttccggcgcg cgaggtgatt ctggcaggac gtgcgccgga
     1741 agcgatcagt ctgcacaacg tcgttgctgg gacggtccgc aagattgccg gcgatcccgc
     1801 gcggcgcgcg gtgatggtgg agatcgcgtt gccggagggc gcactgctgg cccgcgttac
     1861 gccggacgcc attgctcggc tggccttgtc tccggaaggc ccggtgctgg cgctgatcaa
     1921 gtccacgtcg atcgaggtac tgggcaaccc ataggccagg gttgtgcttt agcgctatat
     1981 ctgatcgtat atcgcgaggt gccccgctgt gctcgttgtc acgaaagtgt cttttacgat
     2041 gaatgcgccg ttcgatcctt cgttgcagct tactgagaaa tttgccgttg gtcagccagt
     2101 ctcgcgcaag gaagatccgg ttctgctgcg cggcgagggc cgctatagcg acgacctcaa
     2161 tgttcctgga cagctttatg gcgtgatggt gcgcagccgg gtggcgcatg gcgtgttgct
     2221 gtcggtcgat accgaagcgg cgcgcgagat gccgggtgtg cgggctgtca tcacggttgc
     2281 cgatctggat gcggccggga tcaagaacat gccggcggca gcatcgaaaa atcgtgacgg
     2341 atcggcgaca cccaggcctc cgcagcggcc gttggcgaac gggcgggtgc gctatgtggg
     2401 cgaaccgatc gcgatggtcg tggcggaaac cagcaaacag gccaaggacg ccgctgaagc
     2461 tgtgtttgcc gatatcgatc cgttgccggc ggttacctcc gccagtgagg ccgcggctga
     2521 cggtgctccg ttgttgcatg ccgaagcaac cggcaatgtc tgtttggatt ttcattacgg
     2581 cgatacggaa aaggttgccg cggcgttcgc ccaggcagcg catgtgacga agttggagag
     2641 tcggaataat cggatcgttg tgtgtccgat ggaaccgcgc agcgcgatcg gcgaatacga
     2701 tgctgcaagc gatcgaatga ttttgcgcct cggctgtcag ggcgtatttg gtcagcgcaa
     2761 tctggtgagt ggaattctgg gcataccggt cgagaagttg cgcgtcctga ccggtaatgt
     2821 cggcggttcg ttcggcatga aggcgtcggc ctatccggag tatatttgcc ttttgcatgc
     2881 tgcgcgcagt ttgggccatc cggtgaaatg gaccgatgag cggtccgaaa gtttcatgtc
     2941 ggacagtcat ggccgcgacc atgaaatgac cgcggagctg gcgctggacg cgtcgggtaa
     3001 atttctggcg ctgaggatca ccgggtatgg caatctcggc gcctggctga acagcgcgac
     3061 caccattccg ccgaccatga acacggtcaa gaacatcatt ggtgtctacg caacgccgct
     3121 gatccaggtt tcgacgaaat gcatgttcac caatacgacg ccggtcgggg cctatcgcgg
     3181 cgcaggccgg cccgagggca attattacat ggagcggttg gttgagaccg cggctcggga
     3241 gatgggcatc gaccgggtgg agttacgtcg gcgcaatcac atccagccgg agcagatgcc
     3301 gtaccggtct ccgtcgggca tgctgtatga ctgcggcgaa ttcccgaccg tgatggaaaa
     3361 ggcgctgcgg gccgcaaact gggatggtta tgcggcgcgg caggaggcaa ctcgcgcccg
     3421 tggcaaggtg cggggccgcg gcatcggtca ttatctggaa gtgaccgccg atgccggcaa
     3481 cgaaatgggc ggtatccgct ttgaagcgga cggaaccgtc acgatcatca cgggcacgct
     3541 ggattacggc cagggccatg catcgccgtt tgctcaggta ttatctgcaa gattgggggt
     3601 gccgttcgag aagatcaggc tgctgcaagg ggattccgat caattggtag ccggcggtgg
     3661 gaccggtggc tcacgctcga tgatgcaaag cggcggtgcc attctggaag ccagcgatat
     3721 cgtcgtggaa cgcggcaagc aactcgccgc gcagttgctt gaagcagcgg tggccgatat
     3781 cgaattcctg cacgggcgtt tcagcgttgc cggaaccgat ctcgggattg ggatcatcga
     3841 tctcgcagca cgtgcacgga ttgccgagaa tctgccggag gatttgccgc gcacgcttga
     3901 cgtcaatcac attttcaaag gcgtgccctc ggcgtttccg aatggttgcc acgttgcaga
     3961 agtcgagctg gatcctgata ccggcattgt cgaggtggtc agttacgcaa cagtcaacga
     4021 tttcggcgtg ctggttaacc cgatgctcgt cgctgggcag gcgcatggcg gaatcgccca
     4081 gggaattggc caggcactga cggaacgggt ggtttacgat gaggacgggc aacttttgac
     4141 cggctccttc atggactatg ggctaccgcg cgcttcggat cttccgtcac tggggtttga
     4201 gagtcatccg gtgccagccc gtaccaaccc gcttggcgcc aagggctgcg gggaggctgg
     4261 gtgtgccggc tcgttgccgg cagtgatgaa cgcggtggtc gatgcgctgg cggagtttgg
     4321 cattacgcat atcgatatgc cggcaacacc gcatcggatc tggcaggcaa tgcaggcggc
     4381 gcaaggtggc tgacaaggtc cggatcgatg cgacgcaact caccgaaatt cgactttcgg
     4441 aagatgcaac gcgtgtgacc atgacgttgc ctgatgccgc gggacaaaaa gtcttgctgt
     4501 cgctgcctgc tgcttgtctg aatgctgtgc tcgcggtggt gcctcgacag gcatgccgac
     4561 attttcgaca gtttcctcga taaactgcgg acgaagacgg aggcgttgaa gcctggcgat
     4621 ccgatggatg aaaccagcga catcggcgcc atcatcaacg agaagcaatt ccggaaagtc
     4681 tgcggttatg tcgatgacgg tctgaaccga aaggatgcac ggctggtgtt tggcggtttg
     4741 ccgccgaagg aaggtccgct cagcgagggg tatttcgcga tccccacagt gtttgccgat
     4801 acgtccaatg actgccggct ggcgcgcgag gaaatctttg ggccggtttt ggttgcgatc
     4861 ccgtggcgcg atgaggatga cgcgatccgg atggcgaacg acagtcatta cggtctcgct
     4921 gcctatgtct ggacccatga gatcggcagc ggactgcgtg cggctcacgc gatcgagtcc
     4981 gggtgggtgc aggtcattca ggggctcggc caccagccgg gtcattccta tggcggttac
     5041 aaacaaagcg ggattggccg cgagttctct ctggaa
//
LOCUS       DATAVD010001352         3735 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_501613, whole genome shotgun sequence.
ACCESSION   DATAVD010001352 DATAVD010000000
VERSION     DATAVD010001352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3735
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_501613"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1987
                     /locus_tag="VHX39_25920"
     CDS             <1..1987
                     /locus_tag="VHX39_25920"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF012946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3994627.1"
                     /translation="TSPGGAGCGLAGSVANLIARRPDRPRIEQTQPDHESKPGMTLPI
                     HADETSGFKSFNTRAAKATEKIAGKGYSPIADEALKTLPPPPPGAVFNAEEQARYREY
                     KEARQGAADYIAMEGQFARYLEDVYSAPPVPREPLNDTCEILVIGAGFAGLLLWQKLR
                     EAGFHDVRFCEKGGDVGGTWYWNRYPGIACDVESYSYLPLLEEMGYYPTMKFASGFEI
                     LEYCQSMAERYGFYEHCLFHTTVERTTWDATTGRWTVYTDRGDAMRARYVVLANGILT
                     TPKLARIDGMETYAGKSFHTSRWDYNVDLEGKRVGIIGTGATAVQVIPEIAKVVKQLY
                     VFQRTPSTIDVRDQRATTPEEIDVWSKEPGWARARRERLARISSGRTALKGNDDYLSG
                     KVADFRERRQYASELSPEELMERQLNTNFRIMEQIRARVDAIVADKKTAAALKPYYAY
                     GCKRPTFHDEYLPTFNLPHVTLVDTAPLGVRQINSRGVVHDGVEYQVDVLIYATGFQW
                     MATSTFNMITGLDGVTLRDKWRSEGVRTFLGLHSHGFPNLFIMSGPQGGGGQFNFTRG
                     IEAHTDYVVWMLQTLRDRGAGIVDIAREPEIAYAEHCRHADLRTRPLRDCISYYNGDG
                     AAEPGSLAYYGGPQKWHALRADAQSSLHPYVFRAAPD"
     gene            2082..2897
                     /locus_tag="VHX39_25925"
     CDS             2082..2897
                     /locus_tag="VHX39_25925"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3994628.1"
                     /translation="MGKLDGKVAIVTGAGRGLGRAYARRLAGLGAKLVITDINLRSYE
                     EFELETKAMTAESTVAEIIAGGGQAMGIEMDVTEETAVISMVARVMQQWGRVDILVCN
                     AGGGRGRPVDTKASALDAGLLQLVTSMNLYGTVYSVNAVAPIMKRQRSGKIVTVSSVA
                     GLHPSTDGGYAHYGAAKAAIAHYTRYLAQDLGPYGITANCIAPGTITTGRIVATVMPN
                     QANANRDRTEQVALRRLGSVEDCAKVVEFLCTDLSDYVTGQCIAIDGGLMRGN"
     gene            3387..>3735
                     /locus_tag="VHX39_25930"
     CDS             3387..>3735
                     /locus_tag="VHX39_25930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994629.1"
                     /translation="MSRNYNCIDADGHILEPLELWVDYMDPKYRDHAPRLVRDNQGME
                     RLLIGQKTLGSERGMASLGAVGSRDGTVVVDNASEYKDGRKGGFDPHARIPDMDLDGI
                     DAAYLYPSIGLFAG"
BASE COUNT          797 a         1084 c         1174 g          680 t
ORIGIN      
        1 caccagccca gggggcgctg gttgcgggct cgcaggatcg gtggctaacc tgattgcacg
       61 gcggccggat cggccgcgca tcgaacaaac gcaaccggac catgagagca aaccaggcat
      121 gacgctgcca atccacgctg acgagaccag cggcttcaaa agcttcaaca cgcgggccgc
      181 caaggcaacg gaaaagattg ccggcaaggg ttattcgccg attgccgatg aggcattgaa
      241 gacactgccg ccaccgccgc caggtgcggt gttcaacgcc gaagaacagg cgcgctatcg
      301 cgaatacaag gaggcgaggc aaggagcggc cgactacatc gcgatggaag gccagttcgc
      361 ccgttatctg gaggatgtct attccgcccc tccggtgcct cgcgaaccct tgaacgacac
      421 ttgcgaaatc ctggtgatcg gcgccgggtt cgccggcctg ctgctgtggc aaaaacttcg
      481 cgaggccggc tttcacgatg tgcggttctg cgaaaaaggc ggcgacgtcg gcggcacctg
      541 gtactggaac cgctatcccg gcatcgcctg cgacgtcgaa tcgtacagtt atctgccgct
      601 gctcgaggag atgggctact acccgaccat gaagttcgcc tccggtttcg aaattcttga
      661 atattgccag agcatggcgg aacgctatgg attttacgag cactgcctgt ttcataccac
      721 tgtcgagcgg accacctggg atgcgacgac cggccgttgg acggtgtata ccgaccgagg
      781 cgacgccatg cgtgcgcggt atgtcgtgct ggcaaacggc atcctgacga caccgaaact
      841 ggcgcgtatc gacggcatgg agacttatgc cggcaaatcg ttccacacct cgcggtggga
      901 ctataatgtg gacctggaag gcaagcgcgt tggcatcatc ggcaccggtg ccacggccgt
      961 gcaggtgatt ccggaaattg ccaaagtcgt aaagcaactc tacgtttttc aacgcacgcc
     1021 gtcgaccatc gacgtgcgcg accagcgtgc caccacgccc gaagaaatcg atgtctggtc
     1081 gaaagaaccc gggtgggccc gggcgcgccg tgagcggctg gccaggatct catccggacg
     1141 caccgcgctg aaaggcaacg acgactacct gtcaggcaag gtcgccgatt tccgggaacg
     1201 cagacaatac gcaagcgaat tgtcgccgga agagctgatg gaaaggcagc tcaacaccaa
     1261 ctttcgcatt atggaacaaa tccgcgcgcg cgtcgatgcc atcgtcgcgg ataagaaaac
     1321 tgcggcagcg ttgaaaccgt attatgccta tggctgcaaa cggccgacgt tccacgacga
     1381 atatctgccg acattcaatc tgccgcacgt gacgttggtc gacaccgccc cgcttggcgt
     1441 caggcaaatc aacagcaggg gcgtggtcca tgatggggtg gaatatcagg ttgatgtgtt
     1501 gatctatgcg accggatttc agtggatggc gacctcgacc ttcaatatga tcaccggtct
     1561 cgacggggtc acgctgcgcg acaagtggcg gtcggaaggt gtcaggacat ttctcggcct
     1621 gcacagtcac gggtttccca atctgttcat aatgtcggga ccgcagggtg gtggcggaca
     1681 gttcaatttc acgcgcggaa ttgaggccca taccgactat gtggtgtgga tgctgcaaac
     1741 attgcgcgat cgcggcgccg gcatcgtcga catcgccagg gaaccggaaa tcgcttacgc
     1801 cgagcactgc cgccacgctg acctgagaac ccgcccgttg cgcgattgca tatcctacta
     1861 taacggagat ggtgccgcgg aacccggcag cctggcctat tacggggggc cacaaaaatg
     1921 gcatgcgctg cgcgctgatg cgcagtcttc gcttcacccc tatgtttttc gggccgcgcc
     1981 ggattgatgc gttctctggg cgaggtctcg cggtccgggc tggcgtaatc cgcggttcag
     2041 cacggaattc atgagaacag caacccaagg aggcaacggc gatggggaaa ctcgacggta
     2101 aggtggcgat cgttaccggt gcgggcaggg gtctgggccg tgcctacgcc cgccgcctcg
     2161 cgggtttggg tgcgaagctg gtgatcaccg acatcaacct gcggtcctat gaggaattcg
     2221 aactcgaaac gaaagcgatg acggctgaaa gcaccgtggc ggaaatcatc gcaggcggcg
     2281 gccaggcgat ggggatcgaa atggacgtga ccgaggaaac cgcggtcatt tcgatggtgg
     2341 caagggttat gcagcaatgg ggccgggtcg atatcctggt gtgcaatgcc ggcggaggac
     2401 gcggccgtcc cgtcgatacc aaggccagcg cgcttgatgc cggattgctg cagcttgtca
     2461 ccagcatgaa cctgtatggc actgtataca gcgtgaacgc cgtggcgccg atcatgaaac
     2521 ggcaacggtc aggcaagatc gttacggtca gttcggttgc cggcctgcat ccgtccaccg
     2581 atggcggcta cgctcattac ggggcggcaa aagcagcgat tgcgcattat acacgatatc
     2641 tggcacagga tctgggtcca tacgggatca cggcgaattg tattgcgccc ggcacgatca
     2701 ctacgggccg catcgtcgcg acggttatgc cgaaccaggc caatgccaat cgcgaccgga
     2761 ccgagcaagt ggcactgcgc cggctcggtt cggtcgagga ctgtgcgaaa gtcgttgaat
     2821 tcctttgcac ggatctgtcg gattacgtaa caggacagtg catcgcgatc gatggcgggc
     2881 tgatgcgagg aaactgatcg aaggcggggt ttcaccccgg accccaccaa gaggctctgc
     2941 ctcttggatc tccgccaagg gcagcggccc ttggaaccat tcgatttggg ctggtgtgtg
     3001 aggagggccg accgtggcct ggcaagctcc gagttggccc tcctcacaca ccagcccaat
     3061 ggacagattg caaagggcct cgccctttgc caggggtcca ggggacagcg tcccccggtg
     3121 ggtttcaggg cgaagccctg acccacgtcc gccacttgac actcatcagt agcaagctct
     3181 acccattcgt atagcccgcg ccgcctcgcc cataaacaac cccgaggaaa cgatggacgt
     3241 cggtttgatg atgattttcg tcagctacgg ctgggacgga atgatcgacc ggcaggttag
     3301 gggtgctgcg cgaactcaag gcgcgctgtc cgtcagacga ggggcaatcc cccgcgagcc
     3361 aatcacccaa aggaaggaga cgaaccatga gccgaaacta taactgcatc gacgctgacg
     3421 ggcatatcct ggaaccactg gaactctggg tcgactacat ggaccccaaa taccgcgatc
     3481 acgcgccgcg tctggtgcgc gacaaccagg gcatggagcg cctgctgatt ggccagaaga
     3541 cgttgggcag cgaacgcggc atggcctcgc tgggtgcggt tggttcgcgc gacggcactg
     3601 tggtcgtgga caatgcctcc gaatacaaag atggccgcaa aggcggcttc gacccgcatg
     3661 ctcgcatccc agacatggac ctggacggga tcgatgcggc gtatctgtat ccctcgatcg
     3721 gtttgttcgc cggtg
//
LOCUS       DATAVD010001353         7496 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1990846, whole genome shotgun sequence.
ACCESSION   DATAVD010001353 DATAVD010000000
VERSION     DATAVD010001353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7496
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1990846"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1053
                     /locus_tag="VHX39_25935"
     CDS             <1..1053
                     /locus_tag="VHX39_25935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994630.1"
                     /translation="MPEDVPPAAADPIALTGALRDAGVLTVGRVVEVAVLSDRPTLVS
                     RILRLRLGYDGAPPDAPRTVILKTGLPRTMSVDWIGGRQEVEFYTRIAPMLPNDVVPR
                     CFQAHRAADTGAWHLLLEDLTDTHAVATQWPLPPTQADCETILAAHARLHAAWWDDPR
                     FGVTVGNWLVIEDYQQRVERDYAAMADRLGEVLSPDRRDLYRRFLDAIPRLYARYQTH
                     RDMTIVQGDSHIWNCFLPRNGGIGVRLFDWDSWRIHLSAADLAYMMAMHWYPDRRQQM
                     ERPLLDHYHNVLVVNGVAGYSRRALEDDYRWAALTRLALPPMLAGAQIPPMIWWNNLE
                     RILMAIDDLGCRELLA"
     gene            complement(1130..2317)
                     /locus_tag="VHX39_25940"
     CDS             complement(1130..2317)
                     /locus_tag="VHX39_25940"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEX3994631.1"
                     /translation="MSALDDCYNIFDMREAAKRRLPRGIFEFVDRATEDHLAVADNRA
                     GFHDIKLRHRALVDVSGRSTKTMLFGKEVSLPMIIAPTGAAGLCWYRGELQLAKAAAK
                     AGIPFAMSTASMTAMEEVAEQAGGRLWFQLYVWKRRDLSYQVIERAKKAGYEALVVTV
                     DSAVSPNREYNARNGFAAPLKPNFRMAVDIALHPGWSLGVMGRYLRTTGMPKQENFPP
                     EFQESITQGVGDRADGMRRDSLTWEDVKTFREMWPGLLMLKGVNRVDDALKAINYGVD
                     GIIVSNHGGRNMDSAVATIRVLPEIAEAVGDKATVILDSGVRRGSDIVKALALGAKAV
                     LTGRATLYGTAVAGEAGAAKAIQVIRTEMDKTMAYTGCNRTDEISTDIFFGDRESNRP
                     MAE"
     gene            complement(2468..3652)
                     /locus_tag="VHX39_25945"
     CDS             complement(2468..3652)
                     /locus_tag="VHX39_25945"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEX3994632.1"
                     /translation="MSRLDDCYNVFDLREAAKRRLPRGVFEFVDRSTEDELALRNNRA
                     AFEKIKLKHRALVDVSGRSTKTTLFGKEIALPMAIAPTGAAGLCWHEGELELAKAAAA
                     AKIPFTLATGAMTSMEKIAKEANFRLWFQLYVWKQRELSYQLIERAKNNGFEALIVTT
                     DTIVPPNREYNAKNGFLLPFHPTWRFTWDIMQHPTWFTTVLMKYFTTIGMPRNENYPD
                     PYRRPIGTDPGTREVMRQDSLNWDDIRIFRDKWPGILMLKGINRVDDALKAVSYGVDG
                     IIVSNHGGRNMDSAAATLDMLPDIAEAVGDKATVILDSGVRRGSDIVKALALGAKCVL
                     TGRATLYGTAVGGQAGASKAVGFIKTEMDKTMAYTGCNGVDEISTDIFFGNRESNRLM
                     AG"
     gene            3817..5148
                     /locus_tag="VHX39_25950"
     CDS             3817..5148
                     /locus_tag="VHX39_25950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HEX3994633.1"
                     /translation="MTDYLSLVSDLIRQARTAGADAADAVLVNGTSLSVASRQGKIEH
                     LERSEGRDLGLRVFVGKRAAIVSSTSLDPAGFPSLVERAVAMAKVVPEDRFAGLAETW
                     APPDAVDLDMADPTEPAPDVLAARAAAAEEAAFSVRGVTNSEGAEAGYGRNEIVLVTS
                     AGFAGHRVGTSHSISATALAGEGTDMQRDYDYHGAVYFADLDDPVKIGKSAGERAIAR
                     LHPTRPNTAKIPVLFDPRVAGSLLGHLSGAINGAGVARGTSFLKEKLGQRIFAPGINI
                     HDDPRRVRGARSRTFDGEGTPTQARALIENGILTTWVLDSRSARQLGMTSTGHASRGT
                     GGPPSPSTTNLYLAAGAMTPQALMADIKEGFYITEMIGMGVNGVTGDYSRGAAGFMIR
                     DGALAEPVAEVTVAGNLVEMFANMVAASDLVFRRGTDSPTVRIDGMTMAGG"
     gene            complement(5272..6345)
                     /locus_tag="VHX39_25955"
     CDS             complement(5272..6345)
                     /locus_tag="VHX39_25955"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3994634.1"
                     /translation="MHSVRTLPLVLTLLLAACGGQHAQNARKEDDAIAQAALNAGTPA
                     AALQLADATLKTHPDDEDALIHRGLALTELGRLDEARQTLRQAVTRQPQNAQALLALG
                     RVQLPTDPASAEANFESALKQDSVNAAALNDLGIARDLQGHHVDAEAAYRAAITAQPN
                     MTAPRVNLALCLAIRGKGGDAIRLVQPLANAPEATLKVKQDYAAVLAMAGERDEAQHI
                     LSANLPPDEVARALDALTLARIAPASDAQAAETPVSDPKISETQAPVIGNGAAASVSE
                     HATTVQLGALNSEAAAQGRWQQLSQRFPKLLNGRQPVFSQTQRGGHTFWRVRTSGFSN
                     VAQARSFCDRLHATGDGCAVFDF"
     gene            complement(6354..7298)
                     /locus_tag="VHX39_25960"
     CDS             complement(6354..7298)
                     /locus_tag="VHX39_25960"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX3994635.1"
                     /translation="MRLEFVALGVGFFILPLVIGGGLLFNRMRSDRRLVMRFAALHRP
                     TRAVILEPTKPAESLRAIAIQVVSGLGDWVLRVGLLSGRSRDDVEATLRGAGHTGSAA
                     LRLFIGTKLLLLFLLPASAWLATGDMNISFSTKVVCIAIAAIIGMVGPDMAVRKWRDR
                     HMKRIRDQIPDALDMMVICAGAGLSLGTTIIRVAQELQHSHPSIALELAHTANELQMM
                     TDSKIPLANLGNRCGVESAKRLATTLLQSAQYGTPLTDALRALAAELRTELITRFEAK
                     AARMPVLLTLPMVAFILPCVFLVIGGPAVIKVIHALSH"
     gene            complement(7295..>7496)
                     /locus_tag="VHX39_25965"
     CDS             complement(7295..>7496)
                     /locus_tag="VHX39_25965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="secretion system protein"
                     /protein_id="HEX3994636.1"
                     /translation="ASEARMSIYVLTGLPVLVGGALFFLNPEYIGVLITDPIGNKLLI
                     AAIMLLGSGIAAMKFIVKKSVS"
BASE COUNT         1310 a         2486 c         2323 g         1377 t
ORIGIN      
        1 atgcccgagg atgtcccgcc ggctgcggct gacccgatcg ctctcaccgg tgcgctccgc
       61 gacgccggcg tgctgaccgt tgggcgggtc gtcgaggtcg ccgtgctgag cgaccgcccg
      121 acattggtct cccgcattct gcgcctccgt cttggctatg acggtgcgcc gcctgacgcc
      181 ccgcgcacgg tcatcctcaa gacagggctg ccccgaacca tgtcggtgga ctggatcggc
      241 ggccggcagg aggttgaatt ttacacccgg atcgccccga tgctgccgaa cgacgtcgtc
      301 ccgcgctgtt tccaggcgca tcgggcggcc gacaccggcg cctggcacct gttgctggag
      361 gatttgacgg acacccatgc tgtcgccacg caatggccgc tgccgccaac ccaggcggac
      421 tgcgagacca ttctggccgc ccacgcccgt ctgcatgccg cctggtggga tgatccacgg
      481 ttcggcgtca cggtcggaaa ctggctggtg atcgaggact atcagcagcg cgtggagcgc
      541 gactacgccg cgatggccga tcgcctgggt gaggttcttt cgcccgatcg gcgcgacttg
      601 tacaggcgct tcctggatgc gataccgcgg ctttacgcgc gctatcagac ccatcgcgac
      661 atgacgatcg tgcagggcga ttcccatatc tggaactgct ttcttccgcg caatggtggc
      721 atcggcgtcc ggctgttcga ctgggattcc tggcgcatcc acctctcggc agccgatctt
      781 gcctacatga tggcgatgca ttggtacccc gaccgccggc agcagatgga acggccattg
      841 ctcgatcatt atcataatgt gttggtcgtg aacggggttg ccggctattc ccggcgggcg
      901 cttgaagatg attaccgctg ggccgcactg acccggctcg cactgccgcc gatgctggcc
      961 ggggcccaga ttccaccgat gatctggtgg aacaatctcg agcgcatcct gatggcgatc
     1021 gacgacctgg gatgccgcga acttctggcg tgaccgtgtt ccttacgttg gtcatcgcga
     1081 ccgtccccag gcatggcggg caccaggcag cgggaatgcc agcaagctgt cactccgcca
     1141 tcggccggtt gctctcccga tcgccgaaga agatgtcggt agagatttcg tcggtccggt
     1201 tgcacccggt ataggccatg gttttgtcca tctcggtccg gatgacctgg atggccttgg
     1261 ccgcccccgc ctcgccggcg acagcggtgc catacagcgt cgcgcgcccg gtcagcaccg
     1321 ccttggcacc cagcgccagc gccttgacga tgtcggagcc gcggcggacc cctgaatcga
     1381 ggatcacggt ggctttgtcg cccaccgcct cggcgatttc cggcagcacg cggatggtgg
     1441 cgacggcgct gtccatgttg cggccgccgt ggttggacac gatgatccca tcgacgccgt
     1501 aattgatcgc cttcagcgca tcatcgacgc ggttgacgcc tttcagcatc agcagccccg
     1561 gccacatctc ccgaaacgtc ttgacatcct cccaggtcag cgaatcccgc cgcatgccat
     1621 cggcgcggtc gccgacgccc tgggtgatgg attcctggaa ctccggcgga aaattctcct
     1681 gcttcggcat ccccgtggtc ctcaggtagc ggcccatcac ccccaggctc cagccgggat
     1741 ggagggcgat gtccaccgcc atgcggaaat taggcttcag cggcgcagca aagccgttgc
     1801 gcgcgttgta ttcgcggttg ggtgatacgg cggagtcgac cgtaacgacc aacgcctcat
     1861 aacccgcctt ctttgcccgt tcgattacct ggtacgacag atcgcgccgc ttccagacgt
     1921 agagctggaa ccacaatcgg ccaccggcct gttcggcgac ttcctccatc gcggtcatcg
     1981 aggcggtgga catggcaaag ggaatccccg ccttcgccgc ggccttcgcc agttgcaact
     2041 caccgcggta ccagcacaga cccgctgccc cggtaggggc aatgatcatc ggcaagctga
     2101 cttccttgcc gaacagcatc gtcttggtag accgccccga gacatccacc agcgctcggt
     2161 ggcgcagctt gatgtcatga aaaccggcgc gattgtcggc gaccgcgagg tggtcctcgg
     2221 tagcgcggtc gacaaactcg aagatgccgc gcggcaggcg gcgtttggcg gcttcccgca
     2281 tgtcgaagat gttgtagcag tcgtccagtg cagacatgct cacttccccc aacccgtttg
     2341 tcgcagccct tgtagtggtt caagtcggac ggatagtgcc gtccgatttg aaccactagc
     2401 ccttgatttt gtgggccgat ttacccgatc gcatgggatg cttctgtcgg gttcggacca
     2461 ctggcgacta ccccgccatc agccggttgc tctcccgatt accgaagaag atgtcggtgg
     2521 aaatctcatc caccccgttg cagccggtat aggccatggt cttgtccatc tccgtcttga
     2581 tgaaccccac cgccttcgat gccccggcct gcccgccgac cgcggtgcca tacaatgtgg
     2641 cccgtccggt cagcacgcat ttggcgccga gtgccagggc cttcacgata tcggaccccc
     2701 ggcgcacgcc ggaatcgagg atcacggtcg ccttgtcgcc caccgcctcg gcgatatcag
     2761 gcagcatgtc caatgtggcc gcggcgctgt ccatgttgcg gccaccatgg ttggacacga
     2821 tgatgccatc gacgccgtag ctgaccgcct tcagcgcatc gtcgacacgg ttgatgccct
     2881 tcagcatcaa aatacccggc catttgtcgc ggaaaatgcg gatatcatcc cagttcagcg
     2941 aatcctgccg catcacttcc cgcgtgcctg gatcggtgcc gatcggccgc cggtatggat
     3001 ccggataatt ctcgttccga ggcatcccga tggtggtgaa atacttcatc agcaccgtgg
     3061 tgaaccaggt cgggtgctgc atgatgtccc aggtgaaccg ccatgtcggg tggaacggca
     3121 gcagaaaccc gttcttcgcg ttgtactcgc ggttcggcgg cacgatcgta tcggtggtga
     3181 cgatcagcgc ctcgaagccg ttgttcttcg cgcgctcgat caactgatag gacaattccc
     3241 gctgcttcca gacataaagc tggaaccaca ggcggaaatt cgcctccttg gcgatcttct
     3301 ccatcgaggt cattgcgccg gtggccaggg tgaacggaat cttggccgcc gccgcggcct
     3361 tcgccagttc cagttcgccc tcatgccagc acaaccccgc ggcgccggtc ggcgcgatgg
     3421 ccatcggcag cgcgatctcc ttgccaaaca aggtggtctt ggtggaccgg ccggagacgt
     3481 cgaccagcgc gcggtgcttc agcttgatct tctcgaaagc ggcgcggttg ttgcgcagcg
     3541 ccagttcatc ctcggtcgac cggtccacga actcgaacac gccgcgcggc aggcgccgtt
     3601 tcgcggcctc acgcaagtcg aacacgttgt agcaatcgtc gagcctggac atgccccatt
     3661 ttcccccttg gtgacggaat gatgaagccg accggcatgg agtcaagcca cacacccgcc
     3721 cgctccgtgc aaaccgccgc cgacatccct atctatggct ggaaatccaa acgctctatg
     3781 aacgtcgctg acgcgcgcgg cggaggaatt gactgtatga ccgactacct gtctctggtt
     3841 tccgacctga tccggcaagc ccgaacggcc ggggccgatg ctgccgatgc cgtactggtc
     3901 aacgggacct cgctgtccgt ggcgtcgcgc caaggcaaga tcgagcatct ggaacgatcc
     3961 gaggggcgtg acctgggtct gcgcgtgttc gtcggcaagc gcgccgcgat cgtctcctcg
     4021 acgtcactcg accccgccgg ctttcccagc ctggtggaac gggcggtggc gatggcgaaa
     4081 gtggtgccgg aggaccgatt tgccggcctg gccgagacct gggcgccgcc ggatgccgtc
     4141 gacctcgaca tggccgatcc caccgaaccg gcacccgacg tgctggcggc ccgcgccgcg
     4201 gccgccgagg aagcggcatt ttccgtgcgt ggcgtcacca actccgaggg tgccgaagca
     4261 ggatacggcc gcaatgagat cgtgctggtc acgtccgccg ggttcgctgg ccatcgcgtc
     4321 ggcaccagcc actcgatctc cgctacagcg ctcgccggcg agggcaccga catgcagcgt
     4381 gactacgact accatggcgc ggtctatttc gccgacctcg acgaccccgt gaaaatcggc
     4441 aaaagcgccg gcgaacgcgc catcgcccgg ctgcatccca cgcggccaaa caccgccaaa
     4501 atccccgttc tcttcgaccc gcgcgttgcc ggcagcctcc tcgggcacct gtccggagcc
     4561 atcaacggtg ccggcgtggc ccgcgggacc agcttcctga aggaaaaatt ggggcagcgc
     4621 attttcgccc ccggcatcaa tatccacgac gacccccgcc gcgtccgcgg cgctcggtcc
     4681 cgcacgttcg acggtgaggg cacgccgacc caggcccgag ccctgatcga gaatggtatt
     4741 ctgaccacct gggttctgga cagccggtcc gcccgccagc ttgggatgac ctcgaccgga
     4801 catgcgtcac gcggcaccgg cggtccgccg tcaccgtcca ccaccaacct ttatctggcc
     4861 gccggagcga tgacaccaca ggcgctgatg gccgacatca aggaaggctt ctacatcacc
     4921 gagatgatcg gcatgggcgt caacggcgtg accggcgact acagccgggg cgccgccggc
     4981 ttcatgatcc gcgacggcgc attggcggaa ccggttgccg aggtcaccgt ggccggcaat
     5041 ctggtcgaga tgttcgcgaa tatggtagcc gcgtcggacc tggtgttccg gcgcggtact
     5101 gactcgccga cggtgcggat cgacgggatg acgatggctg gcgggtaggc ggcaggcgac
     5161 cgccagtcgt ccgatcccga cagaaacgtc ccatgcagtc gggtgaatcg gcccacaaaa
     5221 tcaaggggta gtggttcaaa tcggacggca ccatccgtct gattcgaacc actagaagtc
     5281 gaataccgcg cagccgtcac cggtcgcgtg caagcggtcg cagaagctgc gcgcctgcgc
     5341 gacgttggag aacccagacg tccgcacgcg ccagaacgta tggccacccc gctgcgtctg
     5401 ggagaatacc ggctgcctcc cgttcagcag cttggggaag cgttgcgaca actgctgcca
     5461 ccggccttgt gccgccgcct ccgaattgag agcgcccaat tgcaccgtcg tggcatgttc
     5521 ggataccgac gccgcggcgc cgttgccgat caccggcgcc tgcgtctccg atatcttcgg
     5581 gtctgatacc ggtgtctccg ctgcctgcgc gtccgatgcc ggtgcgatcc gcgccagcgt
     5641 cagcgcatca agtgcccgcg cgacctcgtc cggcggcaga ttcgcggaca ggatgtgctg
     5701 tgcctcatca cgctcgccgg ccatggcgag gacggcggcg taatcctgtt tgactttaag
     5761 cgtcgcctcg ggcgcgttcg ccaacggttg cacgaggcgg atggcgtcac cgcccttgcc
     5821 acgaatcgcc aggcacagcg ccaggttgac ccgcggcgcc gtcatgttgg gctgcgccgt
     5881 gatcgcggct cggtaggccg cctccgcgtc cacatgatgg ccttgcagat cgcgcgcgat
     5941 ccccagatcg ttcagcgccg cggcgttgac gctgtcctgt ttgagcgccg actcgaaatt
     6001 ggcttccgcg ctggcgggat cggtcggaag ctgaacccgc ccgagcgcga gcagggcctg
     6061 ggcgttctgt ggttggcgtg tcacggcttg ccgcagggtc tgccgcgctt cgtccaatcg
     6121 gccgagttcg gtcaacgcca ggccacgatg gatcagcgcg tcctcgtcat cgggatgcgt
     6181 cttcaaggtc gcgtcggcaa gttgcagcgc cgctgcgggc gtgccggcat tgagtgcggc
     6241 ctgagcgatc gcatcatcct ctttgcgggc attctgcgcg tgctggccac cacacgcggc
     6301 cagcagcaga gtgagcacga gcggaagcgt tctaaccgag tgcatggatg accctaatga
     6361 ctgagtgcat ggataacctt aatgacggcg gggccgccga tgacaaggaa gacgcacgga
     6421 agaatgaagg cgaccatcgg caacgtcagc agcacgggca tgcgcgccgc ttttgcttcg
     6481 aatcgcgtaa tgagctcggt gcgcaattcg gcggcgagcg cgcgcaatgc gtcggtcagc
     6541 ggtgtgccgt actgggccga ttgcaacaat gttgtcgcca gccgcttcgc actttcgacc
     6601 ccgcaacgat tgccgagatt ggccagcggt atcttcgaat ccgtcatcat ctgcagttcg
     6661 ttcgcggtgt gcgccagttc cagcgcgatg gagggatgcg aatgctgcaa ttcctgcgca
     6721 acccggataa tggtggtgcc caggctcagg ccggccccgg cacagatgac catcatatcg
     6781 agtgcgtcag gaatttggtc gcgaatccgt ttcatatgcc gatcgcgcca cttgcgcacc
     6841 gccatatcgg gacccaccat gccgatgatc gccgcgatgg caatgcagac caccttggtg
     6901 gaaaacgaaa tattcatgtc accggtcgcc agccatgcac tggccggcag caggaacagc
     6961 aacaacagct ttgtgccgat gaacaggcgc agtgcggccg aaccggtgtg gccggcgccg
     7021 cgcaatgtcg cttccacgtc atcgcgggac cggcctgaca gcaagcccac gcgcaggacc
     7081 cagtcgccga gcccggacac cacctggatg gcgatcgcac gaagactttc agctggcttg
     7141 gtgggctcca ggataacagc ccgggttggc cggtgcagcg ccgcaaatcg catgacgagc
     7201 cgtcggtcgc tgcgcatcct gttgaatagc agcccaccgc cgatgaccag cggcaagatg
     7261 aagaatccta cgcccagggc gacgaattcc agcctcacga cacgctcttt ttcacgatga
     7321 acttcatggc ggcgatgccg ctgcccagca gcatgatcgc cgctatcagc aatttgttgc
     7381 cgatgggatc cgtgatgagg acgccgatat actccggatt caggaaaaac aaggcgccgc
     7441 cgacgagaac cggcagcccg gtcagcacat agatgctcat gcgggcttcc gatgcc
//
LOCUS       DATAVD010001354         1803 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3290875, whole genome shotgun sequence.
ACCESSION   DATAVD010001354 DATAVD010000000
VERSION     DATAVD010001354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1803
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3290875"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..784)
                     /locus_tag="VHX39_25970"
     CDS             complement(<1..784)
                     /locus_tag="VHX39_25970"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX3994637.1"
                     /translation="MKHRRFVLAVVFLLIATLAPRWTVAQSQQSEAQPVAGSIPTIKT
                     ETRLVLVDTIVTDKQGHYIRDLTAKDFKVWEDNKEQPITSFSAENDAAGPNGDRRHYL
                     VLFFDNSTMDINDQSRARAAALKFLDNNTGPDRYIAVVDFGGTLKVTQNFTTDSARLK
                     ELVKNLKFSSVSPTPSVASVGPVPNIGGGIPQLVDASANFGARTLLLALRDLAKGMAT
                     VPGRKTLVLFSSGFPLNPTDPNTVERESELTAVINTCNKANVA"
     gene            complement(799..>1803)
                     /locus_tag="VHX39_25975"
     CDS             complement(799..>1803)
                     /locus_tag="VHX39_25975"
                     /inference="COORDINATES: protein motif:HMM:TIGR03436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX3994638.1"
                     /translation="NAAQWLAQSTALEQLNRGDAETQMSLGVLGNVVRRIAAMPGDRT
                     IILVSPGFLKPDNLSQQMGVMEHALHLNIVINTLDARGLYTDLPDVSDTRAAGVGVAG
                     QMQQYRMEEMQDDDDVLAELAYTTGGTFFHNNNDLGEGFQRLAAPPEYSYLLGFSPQN
                     LKLDGNYHKLKVTLKKPANGIVQARRGYYAPKGATDASTQAKQAIEDAVFSRDEVREI
                     PVQVHTQFFKPSEDNAKLSVVVRMDVRHVHFRKADGRNNNDVTVVSAVFDRNGNFVSG
                     NQQVLQLHLKDETLQSRLGSGIAMRSSFDVKPGNYIVRLVVRDEDGQLAAQNSAVEIP
                     "
BASE COUNT          368 a          506 c          518 g          411 t
ORIGIN      
        1 tcgccacatt ggctttgttg caagtgttga taacagcggt aagttccgat tcacgttcca
       61 cggtgttggg atcagtggga tttaagggga atccggagga gaacagcacc agcgtcttgc
      121 ggccggggac ggtcgccatg ccttttgcca gatcccgcaa agccagtagc agtgtgcgtg
      181 cgccaaaatt agccgaggca tccaccaatt gcggaatgcc gccgcctatg ttcggtacgg
      241 gtcccacgga agcgaccgac ggcgtaggtg agaccgatga gaatttcagg ttttttacca
      301 gctccttcag acgagcggaa tcggtagtga aattctgcgt gacctttaga gtgccgccga
      361 agtccactac agcgatgtac cgatcgggcc cggtgttgtt atccagaaat ttcaacgcgg
      421 ctgcgcgcgc ccgtgactga tcgttgatgt ccatcgtcga gttgtcgaag aacaggacca
      481 gataatgacg ccggtcccca ttcgggcctg cggcgtcgtt ctcggcggag aagctggtga
      541 tcggctgctc cttattgtct tcccaaactt tgaagtcttt cgccgtcagg tcgcgaatgt
      601 agtggccttg cttgtcggtg acaatcgtgt cgaccagaac caggcgcgtc tccgtcttga
      661 tggtgggaat cgagcctgca acgggttgcg cctccgactg ttgactctga gccacggtcc
      721 agcgcggcgc gagtgtagct atcagcaaaa aaacaactgc gagcacaaag cggcggtgct
      781 tcataggtgt acccctgact acggaatctc cacggcgcta ttttgcgccg ccagttgacc
      841 atcttcatcg cgtaccacca ggcgcacgat gtaattgccc ggcttcacgt cgaagctgct
      901 tcgcatggca atgcccgaac cgagccggga ttgcagagtc tcgtctttca aatgcagttg
      961 cagaacttgc tgatttccgc tgacgaagtt gccgttgcga tcgaataccg cagagaccac
     1021 ggtcacatcg ttattgttgc ggccgtcagc tttgcgaaag tgaacatgcc gcacatccat
     1081 gcggaccacg accgagagct tggcgttgtc ttcgctgggc ttgaagaatt gagtgtgaac
     1141 ctgaaccggg atttcgcgca cttcgtcgcg tgagaagaca gcatcctcga tcgcttgctt
     1201 ggcttgcgtg cttgcgtccg tggcgccctt gggagcgtaa tagccgcggc gagcctgaac
     1261 gatgccgttg gctggcttct tcaacgtgac tttcagtttg tgataatttc cgtccagttt
     1321 caggttctgc ggcgaaaatc ccagcaagta ggaatattcg ggaggcgcag ccaggcgctg
     1381 aaagccctca cccagatcgt tgttgttgtg aaaaaaagtg cctccggtgg tgtaggcaag
     1441 ctccgccaag acgtcgtcat cgtcctgcat ttcttccata cggtactgct gcatttgacc
     1501 ggcgaccccc acgccagccg ctcgtgtgtc actgacatcc ggcagatcgg tgtataagcc
     1561 tcgggcatcc agcgtattga tgacgatgtt caagtggagc gcgtgctcca tcacccccat
     1621 ctgctgcgac aggttatccg gcttcaaaaa tccgggagag accaggatga tggtgcggtc
     1681 acccggcatg gccgcgattc tgcggacaac attccccaag acaccaagag acatctgcgt
     1741 ctccgcatcc cctcgattga gctgctccag ggcggtcgat tgagccagcc actgcgcagc
     1801 att
//
LOCUS       DATAVD010001355         1630 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2177201, whole genome shotgun sequence.
ACCESSION   DATAVD010001355 DATAVD010000000
VERSION     DATAVD010001355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1630
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2177201"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..836)
                     /locus_tag="VHX39_25980"
     CDS             complement(<1..836)
                     /locus_tag="VHX39_25980"
                     /inference="COORDINATES: protein motif:HMM:NF012951.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HEX3994639.1"
                     /translation="MTVVRFIAPSSGGLLVTGARAALANTLFARPSKGRFVLRMPAGE
                     DRITADLRWLGITWDAVGEAGDYAGAIEQLKAIGRLYPCFESDTELRAKREYRIRRGQ
                     PDVYDRAMLKLTPEQREAAEAGGKNPYWRFRLTNRVLIWNDAISGRREAKLPSISDPI
                     LVAADGTPAAALTAVVDDIADGITHVIRADEGDAAIGVHIDLLQALGHSPAGLGFATL
                     PQLGDAGRLAIRNFRNDGIEAAALVRWLGGGGRFSLRNLARSPDPVALASLNRETLAQ
                     RE"
     gene            complement(833..1207)
                     /locus_tag="VHX39_25985"
     CDS             complement(833..1207)
                     /locus_tag="VHX39_25985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003618014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994640.1"
                     /translation="MSGDLFAPDGGWRVRILDLSGGAADNIVEEVGGFPTLMHANAFA
                     RRYVRDSVERCRVPGMSAKDVLDAWFAFGEDAEVIDAGEGGWRSAAELGTFVDHRAGA
                     EETDWRSLDPRRMETDDDDTDE"
     gene            complement(1204..>1630)
                     /locus_tag="VHX39_25990"
     CDS             complement(1204..>1630)
                     /locus_tag="VHX39_25990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX3994641.1"
                     /translation="TLTSVMLTYPTLLIPFCAWLLMGYFRSVPHELEDAARIDGATRL
                     QTMFKVFLPLCTPGFISAGIFAFTLAQNEFLYALIFLTQTDVRTVPVGAIAELVKGDV
                     FYWGQLMAAALLGSVPVAIIYSFFVEHYVAGLTAGAVKQ"
BASE COUNT          341 a          518 c          500 g          271 t
ORIGIN      
        1 aactcgcgtt gtgcgagtgt ctcgcgattg agtgacgcca aggcaacggg gtcagggctg
       61 cgcgccagat tgcgcagact gaagcgcccg ccaccgccaa gccagcgcac cagcgccgca
      121 gcctcgatgc cgtcgttacg aaaattgcga attgcgagcc ggccggcgtc accgagctgc
      181 ggcagcgtgg cgaaaccgag cccggcggga ctatgtccca aggcctggag cagatcgatg
      241 tgcacaccga tcgctgcatc accctcatcg gcgcgtatca cgtgggtgat accatccgcg
      301 atgtcatcga cgaccgcggt cagagcagcg gcgggcgtgc cgtcagcggc gaccaatatc
      361 gggtcggaga tcgagggcag ctttgcctcg cggcgaccgg aaatcgcgtc gttccagatc
      421 agcacacgat tggtcagacg aaagcgccaa taggggtttt tgccgccggc ctcggccgcc
      481 tcgcgctgtt ccggggtcag cttcagcatg gcccggtcgt aaacgtccgg ctggccgcgc
      541 cggatgcggt attcgcgctt ggcccgcagt tcggtatcgg attcgaaaca aggatacaac
      601 cggccgatgg ctttcaactg ttcaattgcg ccagcgtaat cgccagcttc gccgacggcg
      661 tcccaggtga tccccaacca gcgcagatcg gcggtgatgc gatcctcacc tgccggcatt
      721 cgaagcacga accgtccctt actgggcctc gcaaacagcg tgttggccag tgccgcacgc
      781 gcgccagtga ccaacagccc acccgaggat ggcgcgatga aacgaacgac tgtcattcgt
      841 cggtgtcgtc gtcatctgtc tccatccgcc gtggatcgag cgaacgccag tctgtttcct
      901 ctgccccggc acggtgatcg acgaaagtgc ccagttctgc cgcgctacgc caacctccct
      961 cgccggcgtc gatcacctcg gcgtcctcgc caaatgcgaa ccaggcgtcg aggacgtctt
     1021 ttgccgacat gccgggaacc cggcagcgtt cgaccgagtc acgcacgtag cggcgggcga
     1081 aagcgttggc atgcatgaga gtgggaaatc cgccaacttc ctcgacgata ttgtccgccg
     1141 caccgcccga caggtcgagg atgcgaaccc gccagccgcc gtcgggtgca aacagatcgc
     1201 cactcattgc ttgaccgcac cggcggtcag gccggcgacg taatgctcca cgaagaacga
     1261 atagatgatc gccacgggca cggagcctaa cagagcagcg gccatcaatt gtccccaata
     1321 gaacacgtcg cctttgacca gctcggcaat ggcacccacg ggaaccgtgc gaacgtcggt
     1381 ctgggtcaaa aagatcaacg cataaaggaa ctcattctgc gccagggtaa acgcgaatat
     1441 ccccgcagag atgaagcctg gtgtgcacaa tggtaaaaag accttgaaca tggtttgcag
     1501 ccgtgttgcg ccgtcgatgc gggcggcgtc ctccagctca tgcgggaccg agcgaaaata
     1561 gcccatcagg agccaggcgc aaaatgggat gagcaacgtc ggataggtca gcatgacgga
     1621 ggtcagcgtg
//
LOCUS       DATAVD010001356         1505 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2552352, whole genome shotgun sequence.
ACCESSION   DATAVD010001356 DATAVD010000000
VERSION     DATAVD010001356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2552352"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..892
                     /locus_tag="VHX39_25995"
     CDS             <1..892
                     /locus_tag="VHX39_25995"
                     /inference="COORDINATES: protein motif:HMM:NF016693.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tryptophan 7-halogenase"
                     /protein_id="HEX3994642.1"
                     /translation="VSGEDGQSYRVTTRYVVDATGRDTFLSAKKRLRRKNDEHQSAAI
                     FGHFRGSELRPGEDAGNISIYRFDYGWMWMIPLPDEVMSVGAVCRPAYLKQRRGSPRG
                     FLLDTLKQNAGVRKRLEHAELIGDEVRVTGNYSYDSTRMGGPGWVMIGDAFAFLDPVF
                     SSGVYLAMSGAEHAAQVVDSALREPRREVGLLRKLEKRQRAGMARFAFFIYRFNSPIM
                     GRIFRQPRNIWQIEQGVISMLAGDLFDSPKVVRRLLAFKLVYAMTALRHLMRWRAEHR
                     YRLEQARQQFTGGTTPLDRQ"
     gene            1137..>1505
                     /locus_tag="VHX39_26000"
     CDS             1137..>1505
                     /locus_tag="VHX39_26000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994643.1"
                     /translation="MPEFKVKDSLEHDVLRPRTGAETLWSLPYRALSIGAVMLVAQSA
                     FESVAVATAMPTVARALDGLNLYALAFGAPFAAAIIATVASGHWCDRYGPRKPLWSGV
                     LVFVAGLLMSGLAPTMTLMVM"
BASE COUNT          275 a          442 c          480 g          308 t
ORIGIN      
        1 agtcagtggg gaggacggcc aaagttaccg tgtgacgact cggtacgtgg tggacgcaac
       61 cgggcgcgat acgttcctgt cagccaagaa gcgcttgcgc cgcaagaacg acgagcatca
      121 gagcgccgca atattcgggc actttcgcgg gtccgagtta cgtcccggcg aggatgcggg
      181 caacatcagc atctaccggt tcgattacgg gtggatgtgg atgatcccgc tgccggatga
      241 ggtcatgagc gtcggggcgg tctgtcgccc cgcttatctg aaacagcgca ggggaagtcc
      301 tcgcggcttc ctgttggaca ctctgaaaca gaacgcgggt gtccggaaac gcctggagca
      361 tgcggagttg atcggtgatg aagtgcgcgt caccggaaat tattcgtacg attcaacacg
      421 catgggcggg ccgggatggg tgatgatcgg cgacgcgttc gcgtttctcg accccgtgtt
      481 ttcatccggc gtctatctcg ccatgagtgg tgccgagcac gctgcccagg tggtcgacag
      541 cgcactacgt gagccacggc gcgaggtcgg tctgctacgc aagctcgaaa agcgccaacg
      601 ggccggcatg gcgcggttcg cgttttttat ttatcgattc aacagtccca tcatgggacg
      661 gatattccgc caaccgcgca acatctggca gatcgagcaa ggtgtgatct cgatgctggc
      721 gggcgatttg ttcgattcgc cgaaagtcgt acgccgcctg ttagcgttca agctcgtcta
      781 tgccatgacg gcattgcgcc acctcatgcg atggcgcgcc gagcatcgct atcgcctgga
      841 gcaggcccgc cagcaattca ccggcggcac cacgccgctc gatcgccagt aggagtgggg
      901 agaccgaagc cctccgcggc gggtggtccg tacgccagct cgaacgacag atcaacagcc
      961 agttctacga acgcacgatg ctatcgaaga acaaggctgc gatgctggtg cgtacgcgcc
     1021 gtcaggtcgg ggtgcggcct ctcccaggag acgcccccat gagcacgagt ttccaccaag
     1081 tccccggaac ttgagtaccc cggtattctg ctacattagc caccggcgcc tcagccgtgc
     1141 ccgaattcaa agtgaaagat tccttggaac atgacgtgtt gcgcccgcgg acgggcgcag
     1201 agaccctgtg gtcgctcccg tatcgggcgt tgtcgattgg cgcagtaatg ttggttgcac
     1261 agtcggcatt cgagtccgtc gcggttgcaa ccgcgatgcc gaccgtggcc cgggcactgg
     1321 atgggttgaa tctctatgcg cttgctttcg gtgcgccgtt tgccgcggct atcattgcga
     1381 ctgttgcgtc cggacactgg tgcgaccgtt atggccctcg aaagcccctt tggtccggcg
     1441 tcctcgtgtt tgttgcgggc ctcctgatgt caggcctcgc tccgacgatg acgctgatgg
     1501 tcatg
//
LOCUS       DATAVD010001357         3449 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1990996, whole genome shotgun sequence.
ACCESSION   DATAVD010001357 DATAVD010000000
VERSION     DATAVD010001357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3449
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1990996"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..377
                     /locus_tag="VHX39_26005"
     CDS             <1..377
                     /locus_tag="VHX39_26005"
                     /inference="COORDINATES: protein motif:HMM:NF017416.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX3994644.1"
                     /translation="VRGRIDWKYALGLSLTDAGFDHTVLSEFRSRLVDGKAERLLLDT
                     LLRDLRERGLIKIRGRQRTDSTHVLADVRKLNRLERVGETLRAALNELATIAPDWLQS
                     LAPADWYERYSRRVENYSLPQD"
     gene            346..744
                     /locus_tag="VHX39_26010"
     CDS             346..744
                     /locus_tag="VHX39_26010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994645.1"
                     /translation="MWRTTACPKTDAARLEHAAVIGADGRRLLAAIDAAKEQPWLAQL
                     PAVQVLRKVWADQYVEEGERLRWRAKAEMPAPASQVSSPYDPAARYSTKRDISWVGYK
                     VHLTETCDSELPRIITNVETTPASTPDDNM"
     gene            complement(993..1211)
                     /locus_tag="VHX39_26015"
     CDS             complement(993..1211)
                     /locus_tag="VHX39_26015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994646.1"
                     /translation="MGRTIGAIDVAAVAITADDHLNPAARIGAQEQPALRPMTLVATV
                     ALIVRRPMAWTHTAVAAMMPLQSCSCTV"
     gene            1471..3030
                     /gene="istA"
                     /locus_tag="VHX39_26020"
     CDS             1471..3030
                     /gene="istA"
                     /locus_tag="VHX39_26020"
                     /inference="COORDINATES: protein motif:HMM:NF033546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEX3994647.1"
                     /translation="MCGKASCSVGSVGTGEEDPSVTIPPDLEAQILRYYHVEKWRTGT
                     IARQLRVHAETVARVLAQAGVPRIGAPQRPSKIDPYLPFILEMLAKFPTLTASRLHGM
                     VWERGYRGGKSRFRAVIACHRPRPKAEAYLRLRKLPGEESQCDWAHFGHLVIGRARRP
                     LMAFVMVLSFSRQIFLRFFLDARMENFLRGHLGAFAAWQGIPRVILYDNLRSAVLERQ
                     GDAIRFNPALLDFAAYYRFEPRPVAVALGNEKGRVEKAIRFVRDAFFAARTFAGLDDL
                     NTQADAWCRGVAAERRCPEDQTRRVGEVFAEEAPRLLRQPDNPYPVLERVAVKVGKTP
                     YVRFDLNDYTVPHTQVRRTLTVLADVDRLRIVDGQEIVASHPRSYDKGAQIEIQAHIQ
                     ALVETKRAARRHRATDRLAQAAPASRTLLTGAAERGYNLGNITATLLQLLERYGASQL
                     DAAIVEALDRNVPHPNAVRLALERRRDDRQQAPSVAIILPAHVRARDKAVQPHSLDTY
                     DKLKKVGHETP"
     gene            3035..>3449
                     /locus_tag="VHX39_26025"
     CDS             3035..>3449
                     /locus_tag="VHX39_26025"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3994648.1"
                     /translation="MQARAKVLHLHGLLAHWPEAVAAGWAQSLIDWEDEERARRSLER
                     RLQGAHIGRFKPLCDFDWGWPTAIDRGTFEALMTLDFLNDATNALLVGPNGVGKSTLA
                     RNLAHEALVHGHTVLFTSAGQLLGELASLDSDSALR"
BASE COUNT          615 a         1115 c         1096 g          623 t
ORIGIN      
        1 cggtgcgcgg acggattgac tggaaatacg cactcggcct gtcgctgact gatgccggct
       61 tcgaccatac cgtcctcagc gagttccgct cgcgtttggt tgacggcaaa gctgaacggc
      121 tcttgctcga cacgctgttg agggacttgc gggaacgggg cctgatcaag atccgcggac
      181 ggcaacgcac cgactctacg catgtgttgg ccgatgtgcg caagctcaac cggctggagc
      241 gtgtcggcga aaccttgcgc gcggcgctga acgagctcgc gacgatagcg ccggactggc
      301 tgcaatcact ggcaccagcc gactggtacg aacggtatag ccgacgtgtg gagaactaca
      361 gcctgcccca agactgacgc cgcacgactt gagcatgctg ccgtcatcgg tgccgatggc
      421 cgacgattgt tggctgcgat cgacgctgcc aaggaacagc cctggctggc gcaactgccc
      481 gccgtgcaag ttctgcggaa ggtctgggcg gaccaatatg tcgaggaggg ggaacggttg
      541 cgctggcgcg ccaaagcgga aatgccagcg cctgcctcac aagtgtcctc accttacgat
      601 ccagccgcac gatacagtac caagagagat atctcctggg ttggttacaa ggttcatctc
      661 accgagacct gcgattccga gctgccacgc attataacca acgttgaaac cacgccggcg
      721 tcgactccag atgacaacat gtgaatgccg gtctggatcc gtagttttct gccgaagctt
      781 gatctgacgg ctgggttgcg cggcgttgtt ctggattgtc cagtccatag gagagacctg
      841 ccccggagcc ctgcggaccc accttggcaa tccggtgacg ggtctgcggg agggtcaggc
      901 gtctggcatt ggagatggcg cggtaagaac ctgccgagaa ggcaggcacg gcgccgatcc
      961 atcactggcg agttttgctt cggcgctgtg ccctacaccg tgcaggagca cgattgcagg
     1021 ggcatcatcg cagccaccgc cgtgtgcgtc cacgccatcg gccggcggac gatgagagcg
     1081 acggttgcga ccagagtcat cggccgcaat gccggctgtt cctgtgcgcc gatccgggct
     1141 gccgggttca ggtggtcatc tgcagtgatt gcgaccgcgg ccacatctat tgcgccgatt
     1201 gtgcgcccca tgcgcgtcgc cggtcgctgc atcaagctgg gcgacgttac caggcaagcg
     1261 gccgtggccg gaccaagcac gcggagcggt cgcgccgcta ccggggccgc caaaataaag
     1321 tgacgcatca cggttcaccc gcggatcgaa cggatgctct gctggcggtg gatccggcgg
     1381 tcgtcaaaga accgttgcct ctgggcagct ggcagcctcc gtgcaggcag agatggtgct
     1441 gcatgcgttg cggtcggtgc tgctcggtgc atgtgcggca aggcttcttg cagcgtcggg
     1501 tccgtcggaa caggcgaaga ggacccgagc gtgactattc cccctgatct cgaggcgcag
     1561 atcctgcgtt attatcacgt tgaaaagtgg cgcaccggaa cgatcgcccg gcagttgcgg
     1621 gtgcatgccg aaaccgtcgc ccgggtgctg gcccaggccg gcgtaccgcg catcggcgct
     1681 ccgcagcggc cgtcgaagat cgacccgtat ttgcccttca tcctggaaat gctggccaaa
     1741 ttcccgacgc tgaccgccag tcgcttgcac ggaatggtgt gggaacgcgg ctatcgcggc
     1801 gggaaaagtc gcttccgcgc cgtcattgcc tgccatcggc cacgtccgaa ggcggaggcc
     1861 tatttgcgtc tgagaaagct gcctggtgaa gagtcgcaat gcgactgggc tcacttcggc
     1921 catcttgtga ttggtcgtgc gcgccgcccc ttgatggcat tcgtcatggt actcagcttc
     1981 tcgcggcaga tctttctgcg cttcttcctc gacgcccgca tggagaactt cctgcgcggt
     2041 catctcggcg cgttcgccgc gtggcagggg atcccacgag tcatattgta cgataatctg
     2101 cgcagtgccg tgttggagcg gcagggcgac gcgatccgct tcaaccctgc gctgctcgac
     2161 ttcgccgcgt attaccggtt tgaaccgcgt cccgtcgccg tcgcgcttgg caatgaaaaa
     2221 ggtcgcgtgg aaaaagccat tcggttcgtc cgggacgcgt tcttcgccgc ccgtacattc
     2281 gccggtctgg acgatctcaa cacccaggcc gacgcctggt gccgcggcgt ggctgccgag
     2341 cggcgctgcc cggaagacca aactcggcgc gttggcgagg tcttcgccga ggaagcgccc
     2401 cgactgctga ggcagccgga caatccttac ccggtgctgg agcgggtggc cgtcaaggtc
     2461 ggcaagacgc cctatgtccg gttcgacctg aacgattata cggtgccgca tacccaagtg
     2521 cgccgcacac tgacggtgct ggccgatgtc gaccggctac gcatcgtcga cggccaggag
     2581 atcgtcgcct cccatccgcg cagctatgac aagggcgcgc agatcgagat ccaggcgcat
     2641 atccaggccc tggtcgagac gaaacgcgcg gcacgccgcc accgtgcgac cgatcgtctg
     2701 gcccaggccg cgccggccag ccgcaccttg ctcaccggcg ccgccgagcg tggctacaac
     2761 cttggcaaca tcaccgcgac cctgctgcaa ttgttggaac gctatggggc gagccaactc
     2821 gacgccgcca tcgtcgaggc gctcgaccgc aatgtgccgc atcccaacgc ggttcgcctg
     2881 gcgctcgaac gtcgccgcga cgatcgccag caagcgccgt ccgtcgccat catcctgccg
     2941 gctcacgtgc gagcgcgcga caaggccgtg cagccgcatt ccctcgatac ctacgacaag
     3001 ctgaagaagg tgggtcatga aacaccctga cgccttgcaa gcgcgcgcca aagtcctgca
     3061 tctgcacggc ctcttggctc actggccgga agctgtcgcc gctggctggg cccaatcgct
     3121 gatcgactgg gaggacgaag aacgcgcccg acgcagcctc gagcgtcgcc tccagggagc
     3181 gcatatcgga cgcttcaaac cgctgtgcga cttcgactgg gggtggccaa ccgccatcga
     3241 tcgcgggacc ttcgaggcgt tgatgaccct cgactttctc aacgacgcaa ccaacgcctt
     3301 gctggtcggc ccgaacgggg ttggtaaatc caccttggca cgcaatctcg cccatgaggc
     3361 gttggttcac ggccacacgg ttctgttcac cagcgccggc cagctgctcg gcgaactggc
     3421 ctcgctcgac agcgattccg ccctgcgcc
//
LOCUS       DATAVD010001358         1669 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2922796, whole genome shotgun sequence.
ACCESSION   DATAVD010001358 DATAVD010000000
VERSION     DATAVD010001358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1669
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2922796"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1158
                     /locus_tag="VHX39_26030"
     CDS             <1..1158
                     /locus_tag="VHX39_26030"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994649.1"
                     /translation="GSSALAGMGVGSWCWGWIADKCGRRVVFASTVLMFSLFTGVAGL
                     AGSLGFLVGARFLTGLGLGGMVPIDQALVTEYAPARIRGRVAAMLPLCWPMGYFTAAG
                     MALLLVPQVGWRWLFAIGVLPALLSFVIRRRVPESPRWLASQGRHEEARESLAYVGVN
                     DQLLDKARRELAALPPRPLVPDATFRDLFTPTYAKRVIHTWLLWFCSNFAATGFAVWL
                     PTIYSQYYHIELSRTLFYTFVVAGTQVIGRVFAFGLIDIMGRKTMIIVAYGVAGIAAL
                     AFTQSTTEMSLLINAMVYVFFQDQGNLAMTVYTPEVYPVRIRGKGAAIAMGWGRFGGM
                     TSPIVAGMLIGGGNLILVWGMLAVMLFIASGATLLLAHETRGNLETVSRIA"
     gene            complement(1181..>1669)
                     /locus_tag="VHX39_26035"
     CDS             complement(1181..>1669)
                     /locus_tag="VHX39_26035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994650.1"
                     /translation="VDAIIGSRGALHGPFSVFLHSPEIAGRVAHLGAYVRFEGTLDMR
                     VRVLAAMVVAREFEAEYVWGAQTGGARRQKVPETTITAIRENTLTGVPPEDAMIIEYT
                     RTLLRKHRIPAAMDKAMRDRFGNDQMTQLTGAIGYYTMLAMTVNACELEAAPGAEVLK
                     VG"
BASE COUNT          256 a          526 c          530 g          357 t
ORIGIN      
        1 ggatcctcgg cgttggccgg aatgggcgta ggctcctggt gctggggctg gattgccgac
       61 aagtgtggac gccgcgtggt cttcgcttcg acggtgttga tgttctcctt gttcaccggc
      121 gtcgctgggc tggccggctc gctcgggttt ctcgtgggag cccgatttct gaccggcctc
      181 ggtctgggcg gcatggtgcc gatcgaccag gccctggtca ccgagtatgc gccggcgcgc
      241 attcgcggac gggttgccgc gatgctgccg ttgtgctggc caatgggcta tttcaccgcg
      301 gctggcatgg cgttgctgct ggtgccgcag gttggctggc gttggctgtt tgcgatcggc
      361 gtactgccgg cgctgctgtc ctttgtgatc cgccgccggg tgccggaatc gccgcgctgg
      421 ctcgcctcgc agggacgcca cgaggaagcc cgcgaatcgc tggcctatgt cggcgtcaac
      481 gatcagttgc tcgacaaggc gaggcgggag ctggcagcgt tgccgccaag gccgttggtg
      541 ccggacgcaa cattccggga tttgttcacc ccgacttacg cgaaacgggt catccacacg
      601 tggctattgt ggttctgctc gaacttcgcg gcgaccggtt ttgcggtctg gctgccgacg
      661 atttattccc agtattacca catcgaactg agccgaaccc tgttttacac cttcgtcgtt
      721 gccggcacgc aggtgatcgg ccgggttttt gccttcggcc tgatcgacat catgggtcgc
      781 aagacgatga tcatcgtcgc ttacggcgtc gcaggcatcg cggcactggc attcacccaa
      841 tccacaaccg aaatgagtct gctgatcaac gcgatggtct acgtgttctt ccaggatcag
      901 gggaacctgg cgatgacggt ctacacaccc gaggtttatc cggtgcgcat tcgcggcaaa
      961 ggcgctgcga tcgcgatggg ttggggccgt tttggcggca tgacctcccc gatcgttgcg
     1021 ggcatgctga tcggcggcgg caacctgatc ctggtctggg gaatgctcgc ggttatgctg
     1081 ttcatcgcgt ccggagcaac cctgctgctg gcgcacgaaa cgcgaggcaa tctggaaacg
     1141 gtgtcgcgca tcgcgtgaca ccgttatgac cagatcgcgt ttagccgacc ttcaacacct
     1201 ccgcccccgg cgcagcttcc agctcacacg cgttcaccgt catcgccagc atagtgtaat
     1261 agccgattgc gccggtcagt tgggtcatct gatcgttgcc gaaacggtcc cgcatcgcct
     1321 tgtccatcgc cgccggaatg cggtgcttgc gcaacaaagt gcgggtatat tcgatgatca
     1381 tcgcgtcctc gggcggcacg ccggtcagcg tgttctcccg gatcgcggtg atcgtcgttt
     1441 ccggcacctt ctgccgccgc gcgccgccgg tttgcgcgcc ccagacatat tccgcctcga
     1501 actcgcgcgc caccaccatc gcagcgagca cccggactcg catgtccagc gtgccttcga
     1561 aacgcacgta agcgcccaga tgcgccaccc ttccggcgat ttccggactg tgcaggaaaa
     1621 cgctaaacgg gccgtgcagc gcgccgcgac tgccgatgat ggcatcgac
//
LOCUS       DATAVD010001359         1801 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_689039, whole genome shotgun sequence.
ACCESSION   DATAVD010001359 DATAVD010000000
VERSION     DATAVD010001359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1801
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_689039"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(239..1009)
                     /locus_tag="VHX39_26040"
     CDS             complement(239..1009)
                     /locus_tag="VHX39_26040"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3994651.1"
                     /translation="MSGSFASYPSLRGRTVFVTGGASGIGASEVMHFAAQGAKVAFVD
                     INDEAAESVIRAVRDARDPEPFYQRCDLKDIDSLRQAIHIAAEKFGPVTVLVNNAAND
                     QRHKWEDVTVEFWDERMATNLRHQFFAIQAVAPMMREAGGGSIVNFGSISWHTNHGDM
                     PAYTTAKAAIEGLTKGLARDLGSFGIRVNTIIPGWVMTQRQIDLWLTPEAEANLLKAQ
                     CLKEKVYPQDLARMVLWLASDDSRMCTAQMWVVDGGRL"
     gene            complement(1006..1500)
                     /locus_tag="VHX39_26045"
     CDS             complement(1006..1500)
                     /locus_tag="VHX39_26045"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046316 - gluconokinase activity [Evidence
                     IEA];
                     GO_process: GO:0046177 - D-gluconate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HEX3994652.1"
                     /translation="MTILVVMGVSGSGKSTIAEGVAAAKGWSVLEGDTFHPPANVAKM
                     AAGTPLTDEDRWPWLHAIAAAIDADRARGESAVVACSALRRAYRDILIGDRPDVRLVY
                     LQGSQALIGERMRARHGHFMPPALLDSQFQTLEEPGPDEHPITVQIHGTPDEIVRDIL
                     ERLP"
     gene            complement(1512..>1801)
                     /locus_tag="VHX39_26050"
     CDS             complement(1512..>1801)
                     /locus_tag="VHX39_26050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019087882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="6-phosphogluconate dehydrogenase
                     (decarboxylating)"
                     /protein_id="HEX3994653.1"
                     /translation="EVWRRGSVVTSWLLDLTSAAMAKDADLSSFSGVVEDSGEGRWTV
                     EAAIEEAVPAEVLAASLFVRFRSRQDHTFAEKVLSAMRFGFGGHVEAPTKS"
BASE COUNT          353 a          606 c          514 g          328 t
ORIGIN      
        1 aggcgctgcc agatgcctgg agatgattcg ttcaggtgtc gtgcctgtaa cactacaatt
       61 cgccggatga cggcagcaac gcgctgaagc cgtacgaccg ggttcccggt cgggaataaa
      121 gtttccataa acagcctgga atttccagag ctggcgataa cccgtgcgcg gcttgttggc
      181 tcaaccgggc ccgcgcgcgc cgaacgatgc tgcatcacgc acgcggatct gcgaaccgtt
      241 acaaccgtcc gccgtcgacc acccacatct gtgccgtgca catccggctg tcatccgacg
      301 ccagccacaa caccatccgt gcgagatcct gaggataaac tttctccttc aggcattgcg
      361 ccttcagcag attggcctcg gcctccggcg tcagccacaa atcgatctgc cgctgcgtca
      421 tcacccaacc cggaatgatg gtgttgacac gaatgccgaa agaacccaga tcgcgggcca
      481 gccccttggt caaaccttca atggcggcct tcgcggttgt gtaggcaggc atgtcgccgt
      541 gattggtgtg ccaggaaatc gagccgaaat tgacgatcga cccgccgcca gcctcacgca
      601 tcatcggcgc caccgcctgg atcgcgaaga actgatgccg caggttcgtc gccatccttt
      661 cgtcccagaa ttcgacggtg acatcttccc atttatgccg ttggtcgttc gcggcgttgt
      721 tcaccagcac agtaaccggg ccgaatttct cggcggcgat atggatcgcc tgccgcaacg
      781 aatcgatgtc cttcaggtcg caacgttgat aaaacggttc cggatcgcgg gcatcgcgca
      841 ccgcccggat gaccgactct gctgcctcgt cattgatgtc gacaaaggca acttttgccc
      901 cttgtgccgc aaaatgcatc acctccgagg cgccaatccc actggcaccc ccggtcacga
      961 ataccgtccg gccgcgcaag ctcgggtaac tggcgaaact tccgctcatg gcaaacgctc
     1021 caggatatcg cggacaatct cgtccggtgt gccgtggatt tgcacggtga tcgggtgttc
     1081 gtccggaccg ggctcctcca gcgtctgaaa ctggctgtcg agcagcgccg gcggcatgaa
     1141 atggccgtgc cgagcccgca tgcgctcgcc gatcagcgcc tgcgagccct ggaggtaaac
     1201 cagccgcaca tctggccggt cgccaatcag aatgtcgcga taggcccgcc gcagcgccga
     1261 gcaggcgacc accgcgctct cgccgcgtgc ccgatcagca tcgatcgctg ccgcaatggc
     1321 gtgcagccag ggccaacgat cctcgtcggt cagcggagtg ccggcagcca ttttggcgac
     1381 attggcgggc gggtgaaacg tatcgccctc cagcacgctc cagcctttgg cagcggcgac
     1441 cccttcggcg attgtactct tcccgctccc cgatacgccc atgacaacaa ggatggtcat
     1501 ggtgagccca atcaggattt ggtgggggct tcgacgtggc cgccaaagcc gaagcgcatt
     1561 gcagagagca ccttttccgc aaacgtgtga tcctgccgcg agcggaaccg cacgaacaac
     1621 gacgcggcaa gaacttcggc cggtaccgct tcttcgatcg ccgcctcgac cgtccagcgg
     1681 ccttcaccgg agtcttcgac cacaccggag aacgacgaca gatccgcatc cttggccatc
     1741 gccgccgacg tcaggtccaa tagccaggag gtgaccacgc tgccgcgccg ccagacctcg
     1801 g
//
LOCUS       DATAVD010001360         1822 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1804873, whole genome shotgun sequence.
ACCESSION   DATAVD010001360 DATAVD010000000
VERSION     DATAVD010001360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1804873"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..655
                     /locus_tag="VHX39_26055"
     CDS             <1..655
                     /locus_tag="VHX39_26055"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994654.1"
                     /translation="HGGIGYRALLRCPAMWGLFISQGCLVYSLYLYLSWLPNYLQTSR
                     GLSVVDSGLYTSVPFFIATVVNIIVNWLGDVLMSAQAVRSGLRRYLVALCLVLTASGL
                     LIPYVESLPVIIILISITVSFANAGPAANATLTSDLLRSPADAGRAFAFLVLGGNVFG
                     LIAPIATGYFVAASGSFSSAFIAAGVLALVGAVVTLTLSRGAIGDTAMAFRPLGVSG"
     gene            complement(1135..>1822)
                     /locus_tag="VHX39_26060"
     CDS             complement(1135..>1822)
                     /locus_tag="VHX39_26060"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEX3994655.1"
                     /translation="HSDVNGAIVTSVDADSPAEQAGLQSGDIIMGADGHPLTDARAVL
                     RDVIIVPTGAKIAFNVWRNDHSTEAIVQTAPWPHMKALRSEVLASPASVAQTQAAGCG
                     LHLAAITDADRQRFHLGNATGVLIDQVADGSEAETRGFRPGDVIEKVGNMPVTTPEDI
                     KAQTSHGSAASGDMVAMLVRGPTSMHWLTLFVGRVDLNNLVATPDFLGRPNTRNASAG
                     VTASRPEPQP"
BASE COUNT          292 a          576 c          564 g          390 t
ORIGIN      
        1 ccacggcggt atcggttacc gcgcgttgtt gcggtgcccg gcgatgtggg gcctgttcat
       61 ctcgcaaggt tgcctcgttt actcgctcta tttgtacctg agctggctgc ccaactacct
      121 gcagacctcg cgaggtttat cggtcgtgga ttccggcctc tacacctcgg tcccgttctt
      181 catcgcgacg gtggtgaaca tcatcgtcaa ttggttgggc gacgtgctga tgagtgccca
      241 ggcggtgcgg agtgggctgc gccggtatct ggtggcctta tgcctggttt tgacggcatc
      301 cggcctgctc attccctatg ttgagtcatt gccggtgata atcatcctga tttcgatcac
      361 ggtttccttc gcgaatgccg gccccgccgc caatgccaca ctgaccagcg atttgttgcg
      421 ctctcctgct gatgctggac gcgccttcgc gttcctcgtc ctgggcggta atgtcttcgg
      481 cctgatcgcg ccgatcgcga cgggatattt tgtcgcggca agtggcagct tcagcagtgc
      541 cttcatcgcg gctggcgttc tggctctggt tggcgcagtg gtgacactca ccctatcgcg
      601 cggtgcgatc ggcgatactg cgatggcctt cagacccctg ggtgtgtctg gatgagtatc
      661 atgttctgat tcgcgggcgt gtgacgcgcc cgcgaatatg ggaaccgtgc ttgcccacga
      721 gaaaacggca attcaatatg gacacctctc gcctcgttca ttgcatcgat gccaaggcgt
      781 gcggggaggg ctgcaatctc cggatagttg gcaggtgctt cgccgcagat cccaactttc
      841 gatgattacg gcgcgcgccg gtgattgcca ttagcaccat ctccagaaag cccggaccgc
      901 ccgcagaccc tctttgggct cgaggactcg ccgatcgggc tcgccgcctg gatgctcgac
      961 cacaacgcgc gcagctatac gattattgcc cgactcttcg atggcgtgat cgaaggccgg
     1021 ccacgggacg atatccgaca cggctgaacg tcgcgccccc gagcgggacc cgacgccgtc
     1081 cagtggctgc tgagcaacgg cgaggtgggc ggaaagcgcc gctgcccgct tgcctcaggg
     1141 ctgcggttcg ggacggctgg ccgtcacgcc ggccgaagca ttgcgcgtat tgggccgccc
     1201 gaggaaatcg ggcgtcgcta ccaggttgtt cagatccacc cgacccacga acaatgtcaa
     1261 ccagtgcatt gacgtcggcc cgcgcaccag catcgcgacc atgtcacccg acgcggcgct
     1321 accatggctt gtctgcgcct tgatatcctc aggcgtcgta accggcatgt tgccgacctt
     1381 ctcgatgaca tcacctggcc ggaatcccct ggtctcggct tcagatccgt cggcgacctg
     1441 gtcgatcagc acgccggtcg cgttaccgag gtgaaagcgt tggcgatccg cgtcggtgat
     1501 cgcggcaagg tgcaggccgc accccgcggc ctgggtctgt gcgacactgg cgggactggc
     1561 caaaacctcg ctacgcaggg ccttcatgtg cggccagggc gcagtctgaa ctatcgcctc
     1621 ggtcgaatga tcgttccgcc aaacgttgaa cgcaatcttg gcacccgtgg gcacgatgat
     1681 cacgtcgcgc aggaccgcgc gcgcgtccgt tagcggatgg ccgtcggcac ccatgatgat
     1741 atcgcccgat tgcaggccgg cctgttcggc tgggctgtcg gcatcaacac tcgtgacgat
     1801 ggcaccgttc acgtccgaat gt
//
LOCUS       DATAVD010001361         6125 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1058976, whole genome shotgun sequence.
ACCESSION   DATAVD010001361 DATAVD010000000
VERSION     DATAVD010001361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6125
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1058976"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            281..1123
                     /locus_tag="VHX39_26065"
     CDS             281..1123
                     /locus_tag="VHX39_26065"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HEX3994656.1"
                     /translation="MAATTSTPVIPTPNFGHLIADPALIVPFILNNALHVIGAVVILI
                     IGFWIAGRADSLVQRGLQDSKHIDEMLRSFFGSIARYFILTVTVLAVLSQFGIQTTSL
                     VAVIGAASLAIGLALQGTLSNLAAGVMLLIFRPFRIGHSVTVGGNTGTVRNLSLFWTE
                     IVTDTNTQVIIPNGSVWGQPIKNMTTYTAPVATVRLFVPAPTGWNLNDACNHIKGIVT
                     ETPKVQATPAPNVLLDRGGPENAIQIVITFAPEGDAAGAIKNDILRAIDEQMENPGRR
                     QRVA"
     regulatory      1245..1482
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            1559..3871
                     /gene="metE"
                     /locus_tag="VHX39_26070"
     CDS             1559..3871
                     /gene="metE"
                     /locus_tag="VHX39_26070"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEX3994657.1"
                     /translation="MTLASNLGFPRIGRRRELKTALEQFWSGDSAVTDLQTTATALRT
                     RHWKLQAGAGIAHVPSGEFALYDHVLDTACMLGAIPPGYGWTEGKVSLDTYFALARGT
                     SSADTPGLPAMEMTKWFDTNYHYLVPRLSAGQRFTLTSNRPLAQFREAMALPMRTRPV
                     LLGPVSFLLLSKTTDGSDPLDLLDALLPVYTQILTELAEAGAAWVQIDEPVLALDLSD
                     KARQAFVQTYQSFTTAPEILLTSYFGPLGDNLTTAVNLPVAGLHIDLVRAAAELDSVL
                     AVLPPDRWLSLGIVDGRNVWRTDLRTALATLRHVAAIRGTRRLMVAPSCSLLHVPVDL
                     AQETGLDADVKGWLAFATQKLEEVAALARGLDEGDTAIATQLAASDAAVQSRQASPRV
                     HRPEVAARLAGTTEAMRQRTSPYKQRREAQQAKLHLPLFPTTTIGSFPQTAAVRQARS
                     ALTRKLITQATYETTIEGWIDDAVRWQEDLGLDVLVHGEFERNDMVKYFGEQLSGYAF
                     TQHGWVQSYGSRCVAPPVIWGDVSRPAPMTVRWSAYAQSKTDRPMKGMLTGPVTMLQW
                     SFVRDDIPRSATCRQIALAIRDEVADLETAGIAVIQVDEPAFREGLPLRHADWAAYLD
                     WAVASFRLATCGVRNDTSIHTHMCYSEFNDIMPAIADMDADAISIETTRSRMELLDAF
                     TPGSDASAYPAEIGPGVWDIHSPRVPDTQEMVELLGLARQRLQDWQIWVNPDCGLKTR
                     KWEEVRPALKSLVDAAREVRRQAEANPTQA"
     gene            4004..5164
                     /locus_tag="VHX39_26075"
     CDS             4004..5164
                     /locus_tag="VHX39_26075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994658.1"
                     /translation="MNASLDPTVFAALCAPVPARDFLDLLLRTGFSAEAYRDHYADFA
                     PLNWGPTQALHHFLNHGLKERRGIPMTLDRDAFVALACLPIADTAFKARLLTGLAHHL
                     FADLGHRYGPAIVERWPTVRDLVPQGARPYFVTGDSHSGHLNLTGARGAEWLLPIHLL
                     CTAGSAAGLGNPASRSGYGPLLRDAIKTIQTLPGADAIPLLIQFGQVDIEFVYHFRRV
                     RDGRRALDLEDYKLFCDDMLARYIRFVADIFEPPCRKRVFIASVFPPALSDAAWKQGY
                     VNDDISRRETDISVEELSARIRELEIANIRQRTEIHLHFNARLKAESERLGFGFLDLA
                     TGFLGADGLLDPRYISPEARGFEHHLDTRQTYAGLLTPIWQVLDLTRPASTG"
     gene            complement(5186..>6125)
                     /locus_tag="VHX39_26080"
     CDS             complement(5186..>6125)
                     /locus_tag="VHX39_26080"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEX3994659.1"
                     /translation="HTATANGYVNNSPTHFPYLMETVFNRLDDAKVPWRVYFHDIPQS
                     ATLGRLWGELVTNFTFFNEFIDDAAKGTLPAYSFIEPRYFADPVLKAMPNDQHPPHDV
                     AYGEALIASVYNAVRGGPGWPNTLLIITYDEHGGCYDHVVPPAATPPGGPALGGFDFS
                     SFGVRVPAVIVSPWVPKGSVIRPPGSTPFDHTSIIATLRKLFPFAPLTPRDAAAPDLL
                     GALSGDGNNNEPGSISAAAPTPTDAELTAAAAATPNGMQTALGIAALHLPTDGADVDT
                     HTKRLGAVPDTVPNHPTVAAAVADVVAHVRAFLGLV"
BASE COUNT         1118 a         2159 c         1763 g         1085 t
ORIGIN      
        1 tgaaaccggg ccttctgatc ggctacatgg atcgcttcaa gcattcgcgc atgaaccaac
       61 tctccgcagc cccagccacg gcatcctggc tggcagtctg ccgcaatgcc tatgcgctgt
      121 ggcgatccgc ggcctagccg aacgccaatc gtgttcctgg tcaggccgcc caacatggac
      181 gccgcatgac caccgcttaa ccaggcccac ggcattgccg gttgaaatcc tgaacccgtt
      241 gccgatgtca cggcttgcat cacttcatca gggcggattc atggcagcaa ccacatccac
      301 accagtgatc ccgactccca attttggcca cctcatcgcc gaccccgcgc tcattgttcc
      361 attcatcctg aacaatgcgc tgcacgtgat cggggccgtc gtcattctca tcatcggctt
      421 ttggatcgcc ggccgcgccg acagtctggt ccaacgcgga ttgcaagact ccaagcatat
      481 cgacgaaatg ctgcgcagct ttttcggctc gatcgcacgc tatttcatcc tcaccgtcac
      541 ggtgctggcg gttctctccc aattcggtat tcagactacc agcttggttg ccgtcatcgg
      601 cgccgcctcc ctggcgattg gtcttgcctt gcaaggcacg ctgtcgaatc tcgccgcggg
      661 cgtcatgctg ctgatcttcc ggccgtttcg catcggtcat tccgtcaccg tcggcggcaa
      721 taccggcacg gtacgcaatc tttcgctgtt ctggacagag atcgtcaccg acacgaacac
      781 ccaggtcatc atcccaaacg gcagcgtctg gggccagccg atcaagaaca tgacgactta
      841 taccgccccg gtggccaccg ttcggttgtt cgttccggct cccaccggtt ggaacctgaa
      901 cgacgcctgc aaccacatca aaggcatcgt gaccgaaacg cctaaggtgc aggccacgcc
      961 cgcccccaac gtgctgctcg atcgcggcgg ccctgagaat gccattcaga tcgtcatcac
     1021 attcgcgccc gagggcgacg ccgccggcgc gatcaagaac gacattttgc gcgcgatcga
     1081 tgagcagatg gagaacccag gccgccgcca gcgcgtcgcc tagatgacgt ggtggcggtc
     1141 ggcgtgaagc cgtccaacgg caccccaggg cgcgcgccac catcgtcatc aattcaacat
     1201 tcgccgtggc gtcgctgcct cttgcattct gccatcacat aaagttatcc ttatatgtcg
     1261 atggtcccgt gcgagcgggt gaaaagggaa cgccgtgcgc ctcggcagga ccagtggtcc
     1321 gggggcaagt cggcggctgc ccccgcaact gtcagcggta agccgctggt ccgcctgcct
     1381 tcctccgagg gcatgtcact gaacctcaac cgggttcggg aagacaggac cagcggcgtt
     1441 gacccgccag ccaggagacc tgccatcgtc gcgcgaacca atgccgccga tcggggtgag
     1501 tcgggggctg gagacgactg atgacgaccc aaccaaacca cgccgccagg aggtccgcat
     1561 gaccctggcg agcaacctcg gattcccccg catcggccgc cggcgggagc tgaaaaccgc
     1621 tctggaacag ttctggtccg gcgactccgc tgtgactgac ctccagacaa ccgccaccgc
     1681 cctccgcacc cgccactgga agctgcaagc cggcgccggt atcgcccatg tccccagcgg
     1741 cgagttcgcc ctctacgacc atgtgctcga caccgcctgt atgctgggcg ccattccgcc
     1801 cggctacggc tggaccgagg gcaaggtatc cctcgacacc tatttcgccc tcgccagagg
     1861 taccagttcg gcggacactc ccggcttgcc ggcgatggaa atgaccaagt ggtttgatac
     1921 caactaccac tatttggtcc ccaggctctc cgccggccag cgcttcaccc tgacctccaa
     1981 tcgtcctctg gcccagttcc gcgaggcgat ggcgctgccc atgcgcaccc gtcccgtcct
     2041 cctcggtcca gtcagtttcc tgctgctgtc gaagaccacc gacgggtcgg acccgctcga
     2101 tctgctcgat gccctgctgc cggtctacac ccaaatcctg accgaactgg ccgaggccgg
     2161 cgcggcctgg gtgcagatcg acgaacctgt cctcgcactc gacctgagcg acaaggccag
     2221 gcaggccttc gtccaaacgt accagtcctt caccaccgcg cccgagatcc ttctcacgag
     2281 ctatttcggg ccgctgggcg acaatctgac gaccgccgtt aacctgccgg tcgccggcct
     2341 gcacatcgat ctggtccgcg ccgccgctga actggatagc gtgctcgccg tcctgccgcc
     2401 ggaccgctgg ctgtcgctcg gtatcgtcga cggccgcaac gtctggcgca ccgacctccg
     2461 caccgcgctc gccaccctgc gacatgtcgc cgccattcgc ggcacccgcc gtctgatggt
     2521 ggcaccgtca tgcagcctgc tgcatgtccc ggtcgatctc gcccaggaaa ccggcttgga
     2581 cgccgacgta aagggctggc tcgccttcgc cacgcaaaaa ctggaggaag tcgccgcact
     2641 ggcacgcggc ctagacgaag gcgacacagc catcgccacc caactcgccg ccagcgacgc
     2701 cgcggtgcaa tcccgccagg ccagcccccg cgtgcatcgg ccggaggtag ccgcccgatt
     2761 ggccggcacg accgaggcaa tgcggcaacg taccagcccc tacaaacaac gccgcgaagc
     2821 ccagcaggca aaactccacc tcccgctgtt ccccaccacc acaatcggct cgtttccgca
     2881 gaccgccgcc gtccgccagg cccggtctgc cctgacccgg aaacttatca cccaggcaac
     2941 atacgaaacc acgatcgaag gctggatcga cgacgccgtg cgctggcagg aggacctcgg
     3001 cctcgacgtg ctggtccacg gcgaattcga gcgtaacgat atggtcaagt atttcggcga
     3061 gcaactcagc ggctatgcct tcacccagca cggctgggtg cagtcctacg gcagccgttg
     3121 cgtcgccccg ccggtcatct ggggcgacgt ctcgcgcccg gctccgatga ccgtccgctg
     3181 gtcggcctac gcgcagtcca aaaccgatcg gccgatgaag gggatgctga ccgggccggt
     3241 gaccatgctg caatggtcat tcgtccgcga cgacattccc cgctccgcca cctgccggca
     3301 gatcgccctg gcgatccgtg atgaggtcgc cgacctggaa accgccggca tcgccgtgat
     3361 ccaggtcgac gaaccggcgt tccgtgaggg cctgccgctg cgccacgccg actgggcagc
     3421 ctatctggac tgggccgtcg catccttccg gctagcgaca tgcggcgtgc ggaatgacac
     3481 cagtatccac acccatatgt gctactcgga gttcaacgac atcatgccgg ccatcgccga
     3541 catggacgcc gacgcgattt ccatcgaaac gacccgcagc cgcatggaac tgctggatgc
     3601 cttcacaccc gggtccgacg ccagcgccta ccccgccgaa atcggtcccg gcgtctggga
     3661 catccacagc ccccgcgtgc ccgatacgca ggaaatggtg gaacttctgg gtctcgcccg
     3721 ccagcggctg caggactggc aaatctgggt caaccccgat tgcggcctga aaacccgcaa
     3781 atgggaggaa gtcagacccg ccctgaagag cctggtcgat gccgcgcggg aggttcggcg
     3841 acaggcggag gcgaatccga cacaagcctg aaccgcattc gatccatccg ggtcaccgca
     3901 caggtgaccc ggacctcggg atggacgcgc atccgtccgt ccagcctccc attgcttccc
     3961 cgaacgcggc cgctaccata gccggatgat tgcggagcgc gggatgaacg ccagcctgga
     4021 ccccaccgtc ttcgccgctc tctgcgcgcc ggtccccgct cgggatttcc tcgatcttct
     4081 gctgcggacc ggattttccg ccgaggccta ccgcgatcat tacgctgact tcgccccatt
     4141 gaactggggt ccgacgcagg cgcttcacca cttcctcaac catggcctga aggagcggcg
     4201 gggcatcccg atgacgctcg atcgcgatgc gtttgtcgcg ctcgcctgtc tgccaatagc
     4261 cgataccgcc ttcaaggcga ggctgctgac cggtctggcc caccatctgt tcgccgatct
     4321 cgggcaccgg tatggacctg cgatcgttga acgttggccc accgtgcgtg acctcgtgcc
     4381 acagggggca cgaccctatt tcgtcaccgg tgacagccat tccggccatc tcaacctgac
     4441 tggtgccaga ggcgccgaat ggctgcttcc catccacctt ctctgcaccg ccggttcggc
     4501 ggcgggcctc ggcaaccccg cttcgcgctc cggctatggt ccgctgttgc gcgacgcgat
     4561 caaaacgatc cagacgctgc caggtgccga tgcgataccg ttgcttattc aattcggtca
     4621 ggtcgacatc gaattcgtct atcatttccg ccgggtccga gacggaaggc gcgcactcga
     4681 tctggaagac tacaagctgt tctgcgacga tatgctcgcc cgctatatcc gattcgtcgc
     4741 cgatatattc gagccgccgt gtcgcaagcg ggttttcatt gcctcggtgt ttccaccggc
     4801 gctgtcggat gcggcgtgga aacagggata tgtcaatgac gacatatcgc ggcgtgaaac
     4861 cgacatatcg gtggaggaat tgtcagcgcg cattcgcgaa ctggaaattg cgaacatccg
     4921 ccagcgcact gaaatccacc tgcacttcaa tgcccgcttg aaagccgaat ctgaacggct
     4981 tggcttcggc ttcctcgatc tcgccaccgg attcctgggc gccgatgggc tgctggaccc
     5041 gcgctatatc tcaccggagg cacgcgggtt cgaacatcat ctcgacaccc gccagaccta
     5101 cgcaggcttg ttgaccccga tatggcaagt cctcgatctc acccgcccgg ccagcaccgg
     5161 ctgaccgatc gtccccgccc accattcaaa ccaagcccag aaacgcacgc acatgcgcaa
     5221 cgacatcggc caccgccgcc gcgacggtcg gatggttcgg taccgtatcg ggcaccgcgc
     5281 ccaggcgctt cgtatgcgta tcgacgtccg ccccatcggt gggcaggtgc aacgcggcga
     5341 tgcccagcgc cgtctgcatc ccgttcggcg tcgccgccgc cgcggccgtc agttccgcat
     5401 ccgtgggcgt cggcgcggcc gctgaaatgg accccggttc attgttgttg ccatcgccgc
     5461 tcaacgcacc cagcaggtcc ggtgccgccg cgtcgcgcgg ggtcagcggc gcgaacggaa
     5521 acagttttcg cagtgtcgcg atgatcgagg tatggtcaaa cggcgtcgaa ccgggcggcc
     5581 ggatgaccga ccccttcgga acccaaggcg aaacgatcac cgccggcacc cgcacaccga
     5641 acgaactgaa atcgaacccg cccagtgccg ggccgcccgg aggcgtggcg gcgggcggca
     5701 ccacatgatc gtagcagccg ccatgttcgt cgtaggtgat gatcagcagg gtgttgggcc
     5761 atcccggccc gccacgcacc gcgttgtata cagatgcgat caatgcctcc ccataggcga
     5821 catcgtgcgg cggatgctgg tcgttcggca tcgccttcag cacgggatcg gcgaaatagc
     5881 gcggctctat gaagctgtac gcaggcagag tgcccttcgc cgcgtcgtcg atgaattcat
     5941 tgaagaaggt aaaattcgtc acaagctcgc cccatagcct gccgagcgtg gctgactgcg
     6001 gaatgtcgtg aaaatacacc cgccagggga ccttggcgtc atccagccgg ttgaacaccg
     6061 tctccatcag gtaggggaaa tgcgtcggcg agttgttcac gtaaccgttc gcggtcgccg
     6121 tgtgg
//
LOCUS       DATAVD010001362         9545 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_502505, whole genome shotgun sequence.
ACCESSION   DATAVD010001362 DATAVD010000000
VERSION     DATAVD010001362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9545
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_502505"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..845
                     /locus_tag="VHX39_26085"
     CDS             <1..845
                     /locus_tag="VHX39_26085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEX3994660.1"
                     /translation="SLFMGATLGGCFAASLIALGLPLHISIPAFAMVGMGAMVGGGTG
                     AVMTAVTMTFEMTLDYGIVMPMILAVATSVGVRRMLSRENIYTLKLARRGRTIPKARH
                     SNMFLVRHAQEVMDSDVLVLPADVEFDGFLRQYAEDGRLRHVVVTKGNRIVGVIRVNT
                     GIRRGLEGTHTGVSLGDVVNRHFTIVDPDVVVSDVIERMWRKEALMAIVVRARARGLP
                     RADDVLGVITKEHVADSVAETLTIYPRATDHRRGRRRRRFKAGDAENVSHMSSEAPGT
                     RPSL"
     gene            complement(962..1038)
                     /locus_tag="VHX39_26090"
     tRNA            complement(962..1038)
                     /locus_tag="VHX39_26090"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1002..1004),aa:Pro,seq:ggg)
     gene            1242..2534
                     /locus_tag="VHX39_26095"
     CDS             1242..2534
                     /locus_tag="VHX39_26095"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX3994661.1"
                     /translation="MAIRAPFLKTRYGGYHHREVPDEDTSLTHVGPATPCGEYLRRYW
                     QPICFSDELKELPLRVRILGEDLVVFRDQDGEVGLLELHCPHRGTSLEFGLIDAKGIR
                     CCYHGWLFAPDGTILETPGEPADSTLKDRLCHGAYPTHEQIGIVFAYLGPPEHQQPFP
                     TYDSFVRPGYRLIPGKKYFYPCNWLQIMENAMDPAHTAFLHTIVSGSQFTNEFGVLPE
                     LEFVETPVGMIYVATRRVGQNIWARMVEAVLPNLQQVAPIWEDGQHEHVFSGPMMSRW
                     IVPLDNTNTMLIEYRHVSDTEGVTPAWWADREIMLPGQLAADSYEDAQRRPGDFEAQV
                     SQRPIAVHGLEHLSETDRGISMFRNQLRRGARAVQAGQDPVGLCRAAGAINATYCNDT
                     VVRGPLAENEAKDRQLLRETGRRLAEGYLSNPPLMAGR"
     gene            complement(2666..4669)
                     /locus_tag="VHX39_26100"
     CDS             complement(2666..4669)
                     /locus_tag="VHX39_26100"
                     /inference="COORDINATES: protein motif:HMM:NF019874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3994662.1"
                     /translation="MFMHNLTVYQRLALIIATLSLAMITVSGAQIMVLRSTVIEERKA
                     AVREIVDITKTVLASFDEKAKAGKIPAEEARRLAFDAIGAMRWGQFADYVGIYGAGTA
                     DAGINYVHANPKYVNVNRWDFKDNEGRLLIRDIVGAARAGGGYVDYVTPRATGGAELA
                     KVAYVGSFGAGEQLLAIQAGVYIDDVDATVFRHGVFAAAGGLAGLLIAGLIALLLGRG
                     LTRPLAMLCGTIDRLADGDVEVDVPYTERRNEIGRIAHGLQSFKHSLAEAGQLRADQA
                     EHQQHAEAEKRTALTNMADTIESETSGVLEQIHQRTKAMTTLADEMGTSANRTGTAAG
                     TAANAAAMALANAQTVASAAEQLTYSIRQIGDQVSQSTTVVGRAVSAGTETRSAIEAL
                     NQKVERIGAVADMIGEIAAKTNLLALNATIEAARAGDAGKGFAVVASEVKQLATQTAR
                     STQEIGVHINEVRVATNASVGAVARIEQTITEINTIAASIAQAVDQQGAATAEIARNV
                     TETANAANEMTQRTTEVSSEAGQTGRHASEVKENLDGLTKAVEELRHSVIRVVRTSTT
                     EVDRRAHQRHALELPCRLTVAGQSHAALVVDLSNAGAHVRGSATLRSGDRGTLTIDGV
                     GFALPFVVRHDEDGAWRLTFTFDDATATKFAGVPERLSRRRAA"
     gene            4991..5731
                     /locus_tag="VHX39_26105"
     CDS             4991..5731
                     /locus_tag="VHX39_26105"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: protein motif:HMM:NF003626.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEX3994663.1"
                     /translation="MARLSVNLNKIALLRNSRRTGVPDIARFARIALDAGAEGLTVHP
                     RPDERHIRRSDVGLIAELMRADRPGKEFNIEGYPDDRLLAILREIRPEQCTLVPDAPD
                     AFTSEEGWHLDNAQAHLAHPAIAAIKALGCRVILFIDPDPTVAPRVRQAGADGVEIYT
                     GGYAAAFRDGTYASLLRAIGQTAEAAKDAGLVVNAGHDLNLYNIPPLMDAVPFLAEAS
                     IGHELTADALEGGFGPTVAAYAKALHTD"
     gene            5810..6667
                     /locus_tag="VHX39_26110"
     CDS             5810..6667
                     /locus_tag="VHX39_26110"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3994664.1"
                     /translation="MKPSVTFLGTGGPRRDPTRRSTAILLRTGEEEVLIDCGRGAIHG
                     LAEVGADFSRLTRLVLTHHHFDHIGDLYDVMLTTWLEGRKQPLLVEGPPDTERLVNAL
                     LTQVYDKDHTWRGLGEPAHGGWAPVTARDIAADDIIAGKGWRATAQEVLHGNGLPGLP
                     ASFLRRWVCYGWRFEVAGKVFVFSGDTVDCPGLRKLAHGADALAMCCYAASSQLTTEA
                     LRELGRYTLACGDTVGKIAAACNVGTLILTHHRPGQTGAILEQLAEEVAGDYSGPIVM
                     AHDGLTVPL"
     gene            complement(6681..7259)
                     /locus_tag="VHX39_26115"
     CDS             complement(6681..7259)
                     /locus_tag="VHX39_26115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HEX3994665.1"
                     /translation="MLRNVYHRTLALAGSPRAGWWLALVAFTEASCFPIPPDVLLIPM
                     ALARPQRAWRLALICTIASVVGGALGYYIGYAVFNQLARPVLEFYGYGDRFAAFQAMY
                     ARWGLWVILIKGLTPIPYKIVTIASGAAKFDFWLFMAASLVTRGARFFIVATLLHFWG
                     ERVRDFIERRLTLVTSGVAVAIVGGFVALRLF"
     gene            7339..9024
                     /locus_tag="VHX39_26120"
     CDS             7339..9024
                     /locus_tag="VHX39_26120"
                     /inference="COORDINATES: protein motif:HMM:NF006052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3994666.1"
                     /translation="MSTTVARLLADSLEAHGVDQIFCVPGESYVGLTSVLSERNSIRM
                     VVCRHEGGAGYMAVADGRLRPRAGVCIVSRGPGLSNAMVSLHSAFHDATPMVMLVGQV
                     ERKDFGRQALQEQNYSKMLSDVTKSVIEVNEPEQASEAIARAFHLAESGTPGPVAVIL
                     PEDIFDEETDAKLNLARPRVVPGPRGQDLDRLAEMLTQADRPLVLVGGAMLSSALHDK
                     QAFADLRQLAEDWMLPICPTHRRPQLFDARHPNYGGYMGIRVPPALIGEMKKADLIVS
                     LGERITDSVSQSYTFPAAPQPQLPLVHVWPDANEIGRVWRVDLGIPADPHEVIKGLLA
                     KGAPKDAGKRSAWVSGLHAIHRSLLEKTWLPTTDGINFAAIVCEVDKHLADDAVVTSD
                     AGNFGSFIHRYVGFKPGQEFLSSIVGAMGSGMPMAVAATLRRPGRQVVAFVGDGGALM
                     MGNELATAMQYGGCPILIISDNSMYGTIGMHSYVRYPERKFMEAMKLTNPDFAAWGRA
                     FGAEGITIREESEIADGIARAFAVKTKPVVVHCLTSAIQMSAWRRYERGPALV"
     gene            9039..>9545
                     /locus_tag="VHX39_26125"
     CDS             9039..>9545
                     /locus_tag="VHX39_26125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994667.1"
                     /translation="MREPKRTRRREPVHESIKIALGYDKDDTDNEVLKDWRDRTGRVC
                     KPCWELKYCPYGPLVEQSPILPPERAGVLQHNAHLQKALESGILGELTPLDLERKAEI
                     RNRLKNKRLLIAQAVWTVQDKRRVDAAQKSADPVASFLGTTLPPIQEFRASFDPVLHE
                     YPTLSSVPD"
BASE COUNT         1800 a         2998 c         2941 g         1806 t
ORIGIN      
        1 cgtctttgtt catgggcgcg accctgggtg gttgcttcgc ggcatcgctg atcgctctgg
       61 gcttgccgct tcacatcagc atccccgcct tcgccatggt cggaatgggc gccatggtcg
      121 gcggtggcac cggcgcggtg atgactgccg tcaccatgac gttcgagatg acgctcgact
      181 acggcatcgt tatgccgatg atcctggcgg tggccacaag cgtcggcgtc cggcggatgt
      241 tgtcgcgtga gaacatctat acgctgaagc ttgcgcggcg gggccgcaca attcccaaag
      301 cgcgccattc caacatgttc ctggtacgcc acgctcaaga ggtcatggac tcggacgtgc
      361 ttgtcctgcc ggcagatgtc gaattcgatg gcttcttgcg acaatatgct gaggacggtc
      421 gccttcgtca tgttgttgtg accaagggaa accgcatcgt cggtgtcatc cgggtcaata
      481 ccggtattcg acgtggtctt gaaggaacgc atacgggtgt ctcgctgggc gatgtcgtca
      541 atcggcattt caccattgtt gatcccgacg ttgtcgtctc cgacgtcatt gaacgaatgt
      601 ggcgaaaaga agcacttatg gcgatcgttg tccgcgctcg cgcgcgtgga ttgcctcggg
      661 ccgacgatgt actgggcgtg atcacaaagg agcacgttgc tgactccgtc gcggaaacat
      721 tgacgattta tccgcgcgca actgatcacc ggcgtggcag aagacgaagg cggttcaagg
      781 cgggcgacgc cgagaacgtt tcccatatgt catcggaagc tcccggcacc cggccttcat
      841 tgtgaggaat caggggcggg cagtggaata catgcagggt tcagaggccg ctccatcgag
      901 gacggcggtt ttgccaacgt ggccagtgcc aacgtgataa gaccctgaat acaaggaaaa
      961 ttggtcggag cggcgggatt cgaacccacg acccccagtc ccccagactg atgcgctacc
     1021 agactgcgct acgctccgac cgtgtcgagc cgtttaccag ccggccggct tcacggcaat
     1081 catcctcctc gatatcggcg gtgaacggtg cttgcggcag cgcgacgcga tccggcatgc
     1141 cacgggttta caacggcggc gcctgtggac ttaactggct ggcagaattc tcgcggctcg
     1201 gcacaaggac gcgcatcccc actgttgaac ggaggagtga catggccatc agagccccct
     1261 tcctgaagac tcgctacggc ggctaccatc accgcgaggt ccctgacgag gacacctcac
     1321 tcacccatgt cggccctgcc acaccatgcg gcgaatacct gcgccggtat tggcagccaa
     1381 tctgtttctc ggacgaactg aaggagctgc cgctgcgggt caggatcctc ggcgaggacc
     1441 tcgtggtgtt ccgcgaccaa gacggcgagg tcggactgct ggagttgcat tgcccacacc
     1501 gcggcacctc attggagttc ggcctgatcg acgccaaggg gatccgttgc tgctaccatg
     1561 gctggttgtt cgcgcccgat gggaccatcc ttgaaacccc cggcgagccg gccgacagta
     1621 cgctgaagga ccggctgtgc cacggcgcat accccacgca tgaacaaatc ggaatcgtgt
     1681 tcgcctacct gggcccgccg gagcatcagc aaccgttccc gacctacgac agtttcgtcc
     1741 ggcccgggta tcgcctcatt cctggcaaga aatactttta tccatgcaac tggctgcaga
     1801 tcatggaaaa cgcaatggac ccggcgcata ccgcgttcct ccataccatc gtcagcggct
     1861 cccagtttac caacgagttc ggtgtgctgc cggaactgga gttcgtcgag actccggtcg
     1921 gcatgatcta tgtcgctacg cgccgcgtcg ggcagaacat ctgggcgcgg atggtcgagg
     1981 ccgttctgcc caacctgcaa caggtcgcac cgatctggga ggacggtcag cacgagcatg
     2041 tgttcagcgg cccgatgatg agccgctgga ttgtcccgct cgacaacacc aacaccatgc
     2101 tcatcgaata tcgccacgtt agcgacaccg aaggcgtcac gccggcatgg tgggccgatc
     2161 gcgagatcat gctgccgggt caacttgcgg ctgattccta cgaggatgct cagcgtcggc
     2221 caggcgattt tgaggcgcag gtctcgcagc ggccgatcgc cgttcacggg ttggagcatc
     2281 tgtcggaaac cgatcgcggg atcagcatgt tccgcaatca gttgcggcgt ggcgcacggg
     2341 cggtgcaggc gggtcaggac cccgtcggcc tgtgtcgtgc ggccggggcg atcaatgcga
     2401 cctattgcaa cgatacggtg gtgcgtgggc cattggcgga aaacgaggcg aaggaccgcc
     2461 agctgttgcg ggaaaccgga cggcgtctgg ccgagggtta tctcagcaat ccaccgctga
     2521 tggccggaag gtgagccagg ctgcggtact cgcaccaggg cgtgtcacgt ttcgccagca
     2581 agcttccgtg gttcttccgc tcctaacggc acgccgcgac cgatcgccac aggaaacgat
     2641 cttggccccg gaccgagcgc cgtactcagg cagcgcgccg ccgtgagagg cgctccggta
     2701 cacctgcaaa ttttgtcgcg gtggcgtcat cgaatgtgaa tgtcaggcgc caggcgccat
     2761 cctcatcgtg tctgaccacg aacggcaggg caaacccgac gccatcgatg gtaagcgtgc
     2821 cgcggtcccc agaccgcaaa gtagctgagc cgcggacatg ggcgccggca ttggacaggt
     2881 ccacgaccaa cgcggcatgg gattgacccg cgaccgtcaa ccggcagggc agctcaagcg
     2941 cgtgacgctg atgggcacgc ctatcaacct cggtcgttga agtgcgcaca acgcggatca
     3001 ccgagtgccg caattcctcg accgctttgg tcaggccatc caggttttcc ttgacttcgc
     3061 tcgcatgccg cccggtctgc ccagcttctg aggagacctc ggtcgtgcgc tgggtcattt
     3121 cgttggccgc attggcggtt tcggtcacgt tgcgggcaat ctccgcggtc gcggcgcctt
     3181 gctggtcaac cgcctgggca atcgaggctg caattgtgtt gatctccgtg atggtctgct
     3241 caatgcgggc aacagcccct accgaagcgt tggtcgcgac ccgtacctcg ttgatatgta
     3301 caccgatctc ctgtgtggag cgcgccgttt gggtggcaag ttgcttgacc tcgctggcca
     3361 caacggcaaa tcccttgccg gcgtcgccgg cgcgggctgc ttcaatggtc gcgttcagtg
     3421 ccaacaggtt ggttttggcg gcgatctcgc cgatcatatc ggcgaccgcg ccgatccgtt
     3481 ccactttctg attcaatgcc tcaatcgctg agcgggtctc agttcccgca ctgaccgcac
     3541 ggccgacaac tgtggtggat tggctcacct ggtcaccgat ttggcggatc gagtaggtga
     3601 gttgttcggc cgcactggca acggtctgcg cattggccag cgccatcgca gcggcgttcg
     3661 cagccgttcc ggcagccgtg ccggtgcgat tggcagaggt gcccatttcg tccgcgagcg
     3721 tcgtcatggc cttggttcgt tggtggattt gctccaacac accgcttgtc tcagattcga
     3781 tcgtatcggc catgttggtc agggcggtgc gtttctcggc ctcggcatgc tgttggtgtt
     3841 ccgcctggtc ggcgcgcagt tgaccggcct ccgcgaggct gtgtttgaaa gactgcagcc
     3901 catgagcaat gcggccgatt tcattgcgcc gctcggtata aggcacgtcg acttcgacat
     3961 ccccgtccgc cagacgatcg atcgtgccgc agagcatcgc gagcggccgg gtcagaccgc
     4021 ggccgaggag gagcgcaatc aggcccgcga tcaacaggcc cgcaagacca cccgcggcgg
     4081 cgaacacccc gtggcgaaac accgtggcgt caacgtcgtc gatgtaaacg ccggcctgga
     4141 tggccagcaa ttgttcgcct gcgccgaacg atccgacata cgcgaccttg gccagttccg
     4201 ctccgcccgt cgctctcggg gtaacgtagt cgacataccc gccaccggca cgggccgcac
     4261 cgacaatatc ccggatcagc aggcgaccct cattgtcctt gaaatcccag cgattgacgt
     4321 tgacgtactt cggattggcg tgcacgtaat tgatgccggc atctgcggtc ccggcgccgt
     4381 aaatgccgac atagtcggcg aactggcccc atcgcatggc tccgatcgcg tcgaaggcga
     4441 ggcgccgcgc ttcctccgca gggatctttc cggccttcgc tttctcatca aagctggcga
     4501 gaaccgtctt ggtgatgtcg acgatttcgc gcactgcagc cttacgttct tcgatgacag
     4561 tacttcgaag caccatgatc tgagcgcccg agaccgtgat catcgcgagc gatagggtgg
     4621 cgatgatcaa cgcaagccgc tggtacaccg tgaggttatg cataaacatc aagcgtgctc
     4681 cgggcgcgtg cgtacatccg cctgatgccg gcgagccaaa ccgcacgata atcggagaag
     4741 gttaacaaac cctgaatcga caattcgatt tggccaacga cgcgcatggc gcggctcacc
     4801 caccccccat atccggcgct cacacaacga ttgccatcac cgtccgttca cccgccaacg
     4861 cggcaatcct cccgagcctg aattcgtctc gcaccacgta ccgcttctga tggatgcctg
     4921 ggctcgctga tccgcgacct gtccatttta ggtcctgtct ccaccgcccc tgatccgcta
     4981 tcttcgatgc atggcccgcc tcagcgtcaa cctcaataag atcgccctgt tgcgcaactc
     5041 gcgccgcacc ggggtgcccg acatcgcccg tttcgcccgc atcgcgctcg atgccggcgc
     5101 cgagggcctg accgtgcatc cccggcccga cgagcgccac atccgccgct cggacgtcgg
     5161 tctgatcgcc gaactgatgc gggcggaccg gccgggcaaa gaattcaaca tcgagggcta
     5221 cccggacgac cgcctgctcg ccattctgcg agaaatccgg cccgagcagt gcaccctggt
     5281 ccccgatgcg ccggacgcct ttacctccga ggagggctgg cacctcgaca acgcgcaggc
     5341 gcatctggcg caccccgcga ttgcggcaat caaagcgttg ggctgccggg tcatcctgtt
     5401 catcgatccc gatccgacgg tcgcgccgcg ggtgcgtcag gccggcgcgg acggcgtgga
     5461 aatctatacc ggcggttacg ccgcagcctt ccgcgatggc acctatgcca gcttgctacg
     5521 cgccattggc caaaccgcgg aagcggcgaa agatgcgggc ctcgttgtca atgccggcca
     5581 cgatttgaac ctgtacaaca ttccgccgtt gatggacgcc gtgccgttcc tcgccgaggc
     5641 ctcgatcggc catgaactga cggcggatgc gctggagggc ggatttgggc ccactgttgc
     5701 tgcctacgcc aaggcgctcc acacagactg acccgccacg ccactccgcc acataatccc
     5761 ggcgagtggg tcatggcgct ctgccagcgg aacccaggga gaatgccggt tgaagcccag
     5821 tgtcacgttt ctcggaaccg ggggaccgcg ccgtgatccc acccgccgtt cgaccgcaat
     5881 cctgctgcgc accggcgaag aggaggtgct gatcgattgc ggacgcggtg cgatccacgg
     5941 tctcgcggag gttggcgcgg atttctcccg cctgacccgg ctggtgctga cgcatcacca
     6001 cttcgaccat atcggtgatc tgtatgacgt catgctgacg acctggctgg aggggcgcaa
     6061 gcagccgttg ctggtcgaag gccctcccga caccgagcgt ctggtgaacg cgttgctaac
     6121 tcaggtgtac gacaaagatc acacctggcg cggcctgggc gagcctgctc acggcggttg
     6181 ggcgccggtg accgcacggg acatcgcggc cgatgacatc atcgcaggca aaggctggcg
     6241 cgcgacggcc caggaagtct tgcatggcaa cgggttgccg ggtctgccgg ccagctttct
     6301 gcggcgctgg gtttgttatg gctggcgctt cgaggttgcc ggcaaagtct tcgtcttcag
     6361 cggcgatacg gtggattgcc ccggcctgcg caagctggcc catggcgctg atgcgctggc
     6421 gatgtgttgt tatgccgcgt cctcgcaact cacgaccgag gcgttgcgcg aactggggcg
     6481 gtacaccctg gcctgcggcg acacagtcgg gaagatcgcc gctgcctgca acgttggtac
     6541 cctgatcctg acgcaccacc gtcctgggca gaccggggcg atcctggagc aattggcgga
     6601 ggaagtggca ggcgattata gcggcccgat tgtgatggcg cacgacgggc tgacggtgcc
     6661 gctgtaagcc agtcctgggt tcagaacagg cggagcgcca cgaacccgcc gacgatcgcg
     6721 accgcaactc cgctggttac caaggtcaac cgccgttcga tgaaatccct cacgcgttca
     6781 ccccagaaat gcagcagcgt cgcaacaatg aagaaccggg cgccgcgggt gaccaggctg
     6841 gccgccatga acagccagaa atcgaacttt gccgcgcccg aggcaatcgt cacgatcttg
     6901 taaggaatgg gcgtcagacc tttgatcagg atgacccaca gcccccaccg ggcatacatc
     6961 gcctgaaacg cggcgaacct gtcgccatag ccgtagaatt ccagcaccgg ccgggcgagt
     7021 tgattgaaca cggcgtaacc gatgtaataa cccagagcgc cgccaaccac gctggcgatc
     7081 gtgcagatca acgccagccg ccaggcccgc tgcgggcgag ccagcgccat cgggatgagc
     7141 agcacatcgg gcgggatcgg aaagcaactc gcctcggtga aggccaccag cgccaaccac
     7201 catcccgcgc gcggcgagcc cgccaaagcc aaggtccggt gatacacgtt acgcaacatg
     7261 gagcctccgt cgagcgtctg gtcaccgctc cctacacgcc ttatcgtgac aaaagaacca
     7321 cgaaggagac gtcgccgcat gtccaccacc gtcgcacgcc tgttggccga cagcctggaa
     7381 gcgcatggcg ttgaccagat tttttgcgtg ccgggggaga gttatgtcgg cctgacctcg
     7441 gtactgagcg agcgcaactc gatccgcatg gtcgtctgcc ggcacgaggg cggtgccggg
     7501 tatatggcgg tggccgacgg ccggctgcgg cccagggctg gtgtttgcat tgtgtcgcgc
     7561 gggcccggcc tgtccaatgc gatggtctcg ctgcactcgg cattccacga tgcgacgccg
     7621 atggtgatgc tggttggcca ggtcgagcgc aaggatttcg gccgccaggc gttgcaggag
     7681 caaaactatt cgaaaatgct gtccgacgtc accaaaagtg tgatcgaggt gaatgaaccc
     7741 gagcaagcct cggaagccat tgcacgcgcc ttccatctcg ccgaatccgg caccccaggc
     7801 ccggtcgcgg tgatcctgcc ggaagacatc ttcgacgagg aaaccgacgc caagctcaat
     7861 ctcgctcgcc cgcgcgtcgt tcctggcccg cgcggtcagg atctggacag gttggcggaa
     7921 atgttgacgc aagccgaccg tccgttggtg ttggtcggcg gcgcgatgct gtcatctgcg
     7981 ttgcacgaca agcaggcttt tgcagacctc cgccaactgg ccgaggactg gatgttgccg
     8041 atttgcccca cgcatcgccg gccgcaatta ttcgacgcga ggcatccgaa ctacggcggg
     8101 tatatgggca tccgcgtgcc gccggccctg attggagaaa tgaagaaggc cgacctgatc
     8161 gtttcccttg gcgagcgaat taccgacagc gtcagccaat cctatacgtt cccggccgcg
     8221 cctcaaccgc aattgccgct ggtccatgtc tggcccgacg ccaacgagat tggtcgtgtc
     8281 tggcgcgtcg atctcggcat tccggccgac ccgcatgagg tgatcaaagg cttgctcgcc
     8341 aaaggtgccc cgaaggacgc ggggaaacgg tccgcctggg tctccggttt gcatgcaatc
     8401 caccggtcat tgctggagaa gacgtggttg ccgactaccg acgggatcaa ctttgccgcc
     8461 atcgtctgtg aagtcgacaa acaccttgcg gatgatgcgg tcgtcacctc ggacgccggc
     8521 aatttcggtt cgttcattca tcgttatgtc ggcttcaaac ccggacagga gttcctgtcg
     8581 tccatcgtcg gtgcaatggg ctccggcatg ccgatggcgg tggcggcgac gttgcgccgg
     8641 cctggccgcc aggtggtggc cttcgtcggc gacggcggag cgttgatgat gggcaacgaa
     8701 ctggcgaccg cgatgcaata cggcggttgc ccgatcctga tcatttcgga caactccatg
     8761 tacggcacaa tcgggatgca cagctacgtg cgttacccgg agcgcaagtt catggaggca
     8821 atgaagctga ccaaccccga tttcgccgcc tggggcaggg cgttcggcgc cgaaggcatc
     8881 acgattcggg aagagtccga aattgccgac ggcattgccc gcgcgttcgc ggtaaagacc
     8941 aagcccgttg tggttcactg cctgacttcg gccatacaaa tgagcgcctg gcgccgctac
     9001 gaacgaggtc cagcgttggt atagaatgtg gcagcaaagt gagagaaccc aagcgcacta
     9061 gaagaaggga gccggttcac gagtcaatca agattgcgct cggttacgat aaggatgaca
     9121 cggataatga agttctgaag gattggcgag accggactgg cagggtttgc aagccgtgct
     9181 gggaactaaa gtattgccca tacggcccat tagtcgagca gtctcccatc ctgccgcccg
     9241 agcgtgcggg agttcttcaa cacaatgccc atctacagaa agcactcgag tctggcattc
     9301 tcggtgaact gaccccgctt gatctcgaga ggaaagctga aatccgtaac cgtttaaaga
     9361 acaagcggct tctgatcgca caggccgttt ggacggtaca ggacaaacga agagtggatg
     9421 ccgcacagaa gtcggcggac ccagttgcgt ctttccttgg aactacatta ccacccatcc
     9481 aggaattccg agcgtccttt gatccggtct tgcacgaata tcccactcta tcgtctgttc
     9541 ctgat
//
LOCUS       DATAVD010001363         2058 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1991676, whole genome shotgun sequence.
ACCESSION   DATAVD010001363 DATAVD010000000
VERSION     DATAVD010001363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2058
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1991676"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1500
                     /locus_tag="VHX39_26130"
     CDS             <1..1500
                     /locus_tag="VHX39_26130"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HEX3994668.1"
                     /translation="LLRSSLPGGRADVNMARTLLSVAVLAGVGVAARAQHGADSSAPG
                     ALQEIAQVEAEIDRIEAATLARLQAAPDNQPQQIELLGKAMLYDEQLSVNRNEACAFC
                     HMPETGFTGPISALNDTTGSYPGSVRTRFSNRVPQTHSYAALAPMLHYNPGQGDLVGG
                     NFWDMRATGRRLGNPAAEQAEGPPTNPVEMGLPDAACAVYRASQRPYRGLFERVWGVQ
                     AFGIHWPVDVEAVCDTPGPPPDGKPPVRLEPADRGRANATFDQMAQSIANYEVSAEVT
                     PFTSKYDAVQAGNATFTPQEQLGYELFRGKAKCNTCHRDGGPGEDPLFTDFTASNIGT
                     PANPRLPYYVEQQPDPRGYVANPAGAAYVDPGVAGFIAGQNLLSHPSSVDARWRGLEA
                     ATAGRFQVPTLRNVDKRPYPEFVKSYGHNGYFRSLKEIVHFYNTRDVLPRCHANDPGE
                     GKTCWPASESIANMNKTRVGHLGLSDAEEAAIVSFMRTLSDGYFSRDAR"
     gene            complement(1512..>2058)
                     /locus_tag="VHX39_26135"
     CDS             complement(1512..>2058)
                     /locus_tag="VHX39_26135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994669.1"
                     /translation="RLKIHICAIILCDGAFDKESTMPPIVTTMRWTLLVVLIFVASCA
                     RLRNANDSQDQFGIVTSEGTVLATVEGSATGYTDTELTKLIRNGVAETYGIQRKVASG
                     TLTSGPRMIWHVINNEREPTAIIGVDLIRGGKITRSAFTNAVAPGSEPDGVFMGAVSQ
                     LAQNVLLPATRQPGPLSIGSS"
BASE COUNT          407 a          630 c          633 g          388 t
ORIGIN      
        1 ttgctcaggt cgtcattgcc gggaggtcgg gccgacgtga acatggcgcg gacgctgctg
       61 agcgttgcgg tgctggctgg cgtcggcgtt gcggcgcgcg ctcagcatgg tgccgatagc
      121 agcgcgcctg gggcattgca ggaaatcgcc caggtcgagg cggagatcga ccgcatcgag
      181 gcggcaacgc tggcgcggct gcaagcggca ccggacaacc agccgcagca aatcgagtta
      241 ctcggcaaag cgatgctgta cgacgagcag ctttcggtga accgaaacga ggcctgcgct
      301 ttctgccata tgccggagac cgggttcacc ggcccgattt ccgcactgaa cgacacgacg
      361 gggtcctatc ccggctcggt gcgcactcgg ttcagcaacc gtgtgccgca aactcacagc
      421 tacgccgccc tcgcacccat gctgcactac aatcctgggc agggtgatct ggttggcggt
      481 aacttctggg acatgcgtgc aaccgggcgc cgcctcggta atccggcggc agagcaggcc
      541 gagggtccgc cgacgaatcc ggtcgagatg gggttgcctg acgctgcctg tgcggtttac
      601 cgcgcctcgc agcgacctta tcgcgggttg ttcgaacgcg tctggggggt ccaggctttt
      661 ggcattcact ggccggtgga tgttgaggcg gtctgcgata cgccgggccc accgccggac
      721 ggcaagccac cggtgcggct cgaaccggcc gatcgcggac gggcgaacgc cactttcgac
      781 cagatggcgc aatccatcgc aaactatgaa gtgtccgccg aggtaacgcc gttcacctcg
      841 aaatacgacg cggtgcaggc gggcaacgcg acgttcacgc ctcaggaaca actcggctac
      901 gagctgtttc gcggcaaggc gaaatgcaac acctgtcacc gtgacggtgg gcccggcgaa
      961 gatccgctgt tcaccgactt taccgcgagc aatatcggca cgcccgccaa tccgcgcctg
     1021 ccgtattatg tcgagcagca gccggacccg cgtggctatg tcgccaaccc ggcgggggcg
     1081 gcctacgtcg atcccggcgt cgccggcttc atcgccgggc agaatttgct cagtcacccc
     1141 tcatcggtgg acgcgcgatg gcgggggctg gaggcagcga ccgccggacg cttccaggtg
     1201 ccgacgctgc gcaacgtcga caagcgtcct tatccggagt tcgtgaaatc ctatggtcac
     1261 aacggctatt tccgtagcct gaaggaaatc gtgcacttct acaacacgcg cgatgtgctg
     1321 ccccgttgcc atgccaatga tcccggtgaa ggaaaaacct gctggccggc atcggaatcg
     1381 atcgccaaca tgaacaagac ccgcgtcggg catcttggcc tgtctgacgc tgaggaagcc
     1441 gcgatcgtga gcttcatgcg gacactaagt gacgggtact tctcccgcga tgcacggtaa
     1501 caatgctgca atcatgagga tccaattgac aatggtccag gctgcctggt agccggtagc
     1561 agtacgtttt gtgcgagttg cgataccgcg cccataaaca cgccatccgg ttcagagccc
     1621 ggcgccaccg cgttagtgaa agccgatctt gtgattttgc caccccggat gagatcaacg
     1681 ccgattatgg cggtgggctc ccgttcattg ttgatgacgt gccagatcat tcgcggcccg
     1741 gaagtcaacg tgcccgatgc aaccttgcgc tgtattccat aagtttcagc cacaccattc
     1801 ctgatcaatt tggtcagttc agtgtcggtg taacctgtcg cggaaccttc gacggtcgcc
     1861 aacacagtcc cttccgacgt cacgatgcca aattgatcct gagagtcatt ggcattgcgc
     1921 aaccgcgcgc acgaggcaac aaagattaaa acgaccaata gcgtccagcg cattgtggtg
     1981 acaattggtg gcatcgtgct ctccttgtcg aaagcgccat cgcacaaaat gatggcgcag
     2041 atgtggatct tcaatcgg
//
LOCUS       DATAVD010001364         1724 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1805071, whole genome shotgun sequence.
ACCESSION   DATAVD010001364 DATAVD010000000
VERSION     DATAVD010001364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1805071"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..717)
                     /locus_tag="VHX39_26140"
     CDS             complement(<1..717)
                     /locus_tag="VHX39_26140"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (ubiquinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HEX3994670.1"
                     /translation="MVEFTLPKNSKVTEGKTWPHPEKAKVEREYRVYRWNPDDAANPR
                     IDTYYVNSDDCGPMILDGLIWLKNNVDATLTFRRSCREGICGSCAMNIDGTNTLACTK
                     AMSEVKGAVRVYPLPHMPVVKDLVPDLTNFYAQHASIQPWLQTVSPTPQKEWKQSHED
                     RAKLDGLYECILCACCSTSCPSYWWNSDRFLGPAALLQAQRWIVDSRDEATGERLDNL
                     EDPFRLYRCHTIMNCTRTCPK"
     gene            complement(731..>1724)
                     /locus_tag="VHX39_26145"
     CDS             complement(731..>1724)
                     /locus_tag="VHX39_26145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003629438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX3994671.1"
                     /translation="LVNSQGERFMERYAPSAKDLASRDVVSRAMTIEIREGRGVGPKK
                     DHIFLHLDHLDPKILAERLPGITESARIFAGVDLTREPVPIVPTVHYNMGGIATNFHG
                     EAGIKKDGNPDHVVPGLLALGEAACVSVHGANRLGSNSLIDLVVFGRAAALRCADVLT
                     ANDKQPELPKDSAELALSRLDKFRNASGGTPTAVLRAKMQHVMQNNCAVFRTGEVLKE
                     GSKLIHEVFDGTSDIRTSDRSLIWNSDLIETLEFTNLIEQAVVTVDAAVNRTESRGAH
                     AREDFPDRDDQNWMKHTLTWLDTKTGNVKIDYRPVHTFTLTNDVSYIEPKARVY"
BASE COUNT          296 a          494 c          560 g          374 t
ORIGIN      
        1 tttcgggcac gtccgggtgc aattcatgat cgtgtggcag cgatagagcc ggaacggatc
       61 ttcgaggttg tcgagccgct cgccggtagc ctcatcgcgc gaatccacga tccagcgctg
      121 cgcctgcaac agcgcagccg ggccgaggaa gcggtcggaa ttccaccagt agctcgggca
      181 ggaggtcgag cagcaggcgc acaggatgca ctcgtaaagt ccatcgagct tggcgcgatc
      241 ttcgtggctc tgcttccatt ccttttgcgg cgtcggcgat acagtttgca gccacggttg
      301 gatcgaggcg tgctgggcgt agaagttggt gagatcagga accagatcct tcaccaccgg
      361 catgtgcggc agcgggtaga cccgcacggc gcctttgacc tcgctcatcg ccttggtgca
      421 ggcgagcgtg ttggtgccgt cgatattcat ggcgcacgag ccgcagatac cctcgcggca
      481 ggaacggcgg aaagtcagcg tcgcgtcgac gttgtttttc aaccagatca ggccatccag
      541 aatcatcggc ccgcaatcgt cgctgttgac gtaataggtg tcgatgcgcg gattggcagc
      601 gtcgtccgga ttccagcgat aaacgcgata ttcgcgttcg acctttgcct tttcaggatg
      661 aggccaggtc ttgccttcgg tgactttgga gtttttcggc agcgtgaatt cgaccattgc
      721 ctgtttgctt tcagtaaacg cgggctttcg gctcgatata cgagacgtcg ttggtgagcg
      781 tgaacgtgtg taccggccgg taatcgatct tgacgttgcc ggtcttggtg tcgagccacg
      841 tcagtgtgtg cttcatccag ttctgatcgt cgcgatccgg gaagtcctcg cgcgcatggg
      901 cgccacggct ttcggtgcgg ttgacggcgg cgtccacagt gacgacggcc tgttcgatca
      961 ggttggtgaa ttccagtgtc tcgatcaggt ccgagttcca gatcaacgaa cgatcgctgg
     1021 tgcggatgtc gctggtcccg tcgaatactt cgtggatcag cttcgatccc tctttcagca
     1081 cctcgccggt gcggaacacc gcgcaattgt tctgcatgac gtgctgcatt ttggcccgca
     1141 gcaccgcggt tggcgtgccg cccgacgcgt tgcggaattt gtcgaggcgt gacagcgcca
     1201 gctcggcgga gtcttttggc agctccggct gcttgtcgtt cgcggtgaga acatcggcgc
     1261 agcgcaacgc cgcggcacgg ccgaacacca caagatcgat cagcgagttg gagccgaggc
     1321 ggttggcacc gtgcaccgat acgcaggccg cttcgccgag cgccagcagg cccggcacga
     1381 catggtcggg attgccgtct ttcttgatcc cggcctcgcc gtgaaagttc gtggcgatgc
     1441 cacccatgtt gtagtgcacg gtcggaacga tcggcaccgg ctcgcgggtc aggtcgacgc
     1501 cggcgaagat tcttgcggac tcggtgatgc ccggcaatcg ctcggccaga attttcgggt
     1561 cgagatggtc gaggtgcagg aagatatggt ctttcttcgg accgacgccg cggccttcac
     1621 ggatctcgat cgtcatggcg cgggaaacca cgtcgcgtga ggcgaggtct ttggccgacg
     1681 gcgcatagcg ctccataaag cgctcgcctt gggagttgac caga
//
LOCUS       DATAVD010001365         1524 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1991804, whole genome shotgun sequence.
ACCESSION   DATAVD010001365 DATAVD010000000
VERSION     DATAVD010001365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1991804"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            184..1062
                     /locus_tag="VHX39_26150"
     CDS             184..1062
                     /locus_tag="VHX39_26150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HEX3994672.1"
                     /translation="MLAAMSSFPVHVIGASGRSGRALAQKLGSRIVPVVRDAAKWAAH
                     GFGLTPIVADLTDPSSLAQALRGATHVMSCAHARFAPQVIAAAPEQATLVLLGSTRKF
                     TRWPDAHGNGVLAGEAAFLASGRAGVMLHPTMIYGAEGEDNVQRLAVLIRRLPLLPLP
                     GGGRSLVQPIHQSDVTQAILAALEHPWAGPHAMVIAGPEPITYFDFIQAIASASRSRR
                     PTTLTVPAGSLIALAPLTRFLPGLPTIEAAEIRRLLEDKAFDIGPMRAALGFTPISLH
                     EGLALTFAPRHRRGQD"
     gene            1091..>1524
                     /locus_tag="VHX39_26155"
     CDS             1091..>1524
                     /locus_tag="VHX39_26155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX3994673.1"
                     /translation="MPIINRIAEFHADMTEWRRDLHAHPELSMQEFRTSAMVQEKLKS
                     FGVDEIITGMATTGVVGVIRAGTSDRAIGLRADMDALPIQEATGLDYASQNPNVMHAC
                     GHDGHTTMLLGAAKYLAETRNFDGTVYLVFQPAEEFEGGAEK"
BASE COUNT          273 a          478 c          482 g          291 t
ORIGIN      
        1 cgagaaactt gccacgatcc ccggaacgct ggcccaacct ggcgacggcc gcagcgcaat
       61 tggggcaagc gaaccgagca tcatggcccg gcgccgcgcg atgttgggtg cgtgcagaag
      121 aaagttcgat ctcattggtt cggccgtcct actgccatgg cgcaatctgc ggctggatgc
      181 ggcatgctcg ccgccatgtc cagcttccct gttcacgtca tcggcgcttc cggacgatcc
      241 ggtcgtgccc tggcccagaa attgggctct cggatcgttc ctgtggtccg ggacgcagcg
      301 aagtgggcag cgcatggctt tggcttgacg ccgatcgttg ccgatctaac ggacccatct
      361 tcgctggcgc aggcgttgcg tggggcaact catgtgatga gttgtgcaca cgcccgtttc
      421 gcaccgcagg tcatcgcggc ggccccggaa caggcaactc tggttctcct gggcagcacg
      481 cggaaattta cgcgctggcc ggatgcgcac ggtaacggtg tactggcagg tgaagctgca
      541 ttcctggcct cgggtcgagc cggggtcatg ctgcacccaa ccatgatcta tggcgcggag
      601 ggtgaggaca atgtgcagcg gctcgcggtg ctgatcaggc ggctgccttt actgcctctg
      661 cctggcggcg gccgctcact ggtacaaccg atccatcaaa gcgacgtcac acaagccatt
      721 ctggcagcgc tggagcatcc ctgggctgga ccgcacgcca tggtgattgc tggtccggag
      781 ccgataacct atttcgactt cattcaggcg attgcgtcgg cgtcccgatc gcgacgaccg
      841 actacgctga ctgtccctgc gggttcgttg attgccctcg cgccgctcac acggtttctg
      901 ccgggactgc cgacgatcga ggccgcagaa atccgccgat tgctcgagga caaagccttc
      961 gatatcggcc cgatgcgcgc cgcactgggc tttacgccga tctcgctgca cgaggggctt
     1021 gcgttgacat ttgcaccccg ccatcgtcgc ggtcaggatt gagccggcca ttaccaagcg
     1081 ggagccctgc atgcccatca tcaaccgtat cgccgaattt cacgccgaca tgaccgaatg
     1141 gcgccgcgat ctgcacgcgc accccgagct gtcgatgcag gaattccgca cctcggcgat
     1201 ggtgcaggag aagctgaaat cgtttggcgt cgatgaaatc atcaccggca tggcgactac
     1261 cggggtggtt ggagtgatcc gggccggcac ctcggaccgc gcaatcggct tacgggcgga
     1321 tatggacgcg ctgccgatcc aggaggcgac cggcctcgat tacgccagtc agaaccccaa
     1381 cgtcatgcac gcctgcggcc atgatgggca cacgacgatg ttgttgggcg cagccaaata
     1441 tctcgccgag acgcgcaact tcgatggcac tgtgtatctc gtgttccagc cggctgagga
     1501 gttcgagggc ggcgccgaaa agat
//
LOCUS       DATAVD010001366         5154 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2737623, whole genome shotgun sequence.
ACCESSION   DATAVD010001366 DATAVD010000000
VERSION     DATAVD010001366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5154
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2737623"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VHX39_26160"
     CDS             <1..190
                     /locus_tag="VHX39_26160"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX3994674.1"
                     /translation="AWEEADGSLGHELLVTVTLEDLGSRTRLTLRQGVFDSVEWRDSH
                     VLGWTSCIERFADYVTTG"
     gene            201..935
                     /locus_tag="VHX39_26165"
     CDS             201..935
                     /locus_tag="VHX39_26165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEX3994675.1"
                     /translation="MQHQIVSAEEWTAARQQLLAEEKQLTRMRDQLSEHRRELPWVKV
                     DKTYVFDGPNGRETLADLFDGRSQLVVRHFMFGPGWEEGCIGCSFSADHLDGALLHLA
                     QRDVTFVVVSRAPLAELQAFRQRMGWRFKWVSSYGSDFNYDYGVSFTPEQLAAGKVTY
                     NYTETANAGEEMPGTSVFYKDADGTIAHTYSSFARGGEPLLGTYAILDMTPKGRDETG
                     PRGNLTDWVRLHDRYDEGSASCCAAD"
     gene            1012..2226
                     /locus_tag="VHX39_26170"
     CDS             1012..2226
                     /locus_tag="VHX39_26170"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994676.1"
                     /translation="MNSYYRWVIVAAGGFMGCVAIGSIFSLPVFLQPMSAATGWSRTA
                     ISLAMTFDFVTMGIASFGWGMLMDRVGPRIVLLAGSCILGSGLVLASRSATVEQFQLL
                     YGVLVGAGGGAIFAPLMATVTGWFDRHRSLAVSLVSAGMGVAPMTVAPIAAVLVSRYD
                     WRFSQLVIGLAVWALLIPAAFLVRRAPGLTGKGTGVRSDEPQMTLRAALTSRPFIVLA
                     AVYFLCCATHSGPLFHTVSYAISCGLTVTAAVSIYSVEGLAGLVGRIAFGLLGDRFGA
                     KRTFVSGLFLQAAAVGCYMLVRQQFAFYSVALVFGFAYAGIMPLYAVLVRENFPLSII
                     GSVVGAASMASSLGMALGPLAGGLIFDTYGTYRWLYVASVLFGLGAAVIMLTFRPAER
                     REGPTLNPVAAE"
     gene            complement(2236..3450)
                     /locus_tag="VHX39_26175"
     CDS             complement(2236..3450)
                     /locus_tag="VHX39_26175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020592186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional alpha/beta hydrolase/OsmC family
                     protein"
                     /protein_id="HEX3994677.1"
                     /translation="MESRKVEFPGTTGAILAARLDLPPEPRAYALFAHCFTCGKDIYA
                     ASRIAEGLASRGIAVLRFDFTGIGSSEGEFANTNFSSNVADLVAAADYLRQHHGPPAL
                     LIGHSLGGAAVLAAAPRVPDATAVVTIGAPASAAHVTHNFAANLADIAEHGTAEVTLA
                     GRSFTITKQFLDDLGRQTFLDNLADMKKALLVCHAPRDEYVGIDNASAIFTAARHPKS
                     FLSLDTADHLLRKRSDATYVADVIATWVSRYLAAGEHPESLPDGVVEVTETRTGRFAQ
                     RVRTGRHVVAADEPVAVGGDDTGPGPYDYLLAALGACTSMTMRLYAERKGIAAERFSV
                     RLSHRRVHAEDCADCETTEGNIGEITRDIAIAGDLTDAERARLIEIADKCPVHETLTH
                     EIKIRSRLMPAG"
     gene            3665..4816
                     /gene="dprA"
                     /locus_tag="VHX39_26180"
     CDS             3665..4816
                     /gene="dprA"
                     /locus_tag="VHX39_26180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HEX3994678.1"
                     /translation="MPTEDAIQRLRLARTEGVGPITWRRLLARYHTPAAALAALPNLA
                     QAGGKASPPATPSIAEANREFEQTEKLGGRLIFIGEPDYPPLLADLDDAPPVIAVLGD
                     AALLAAPAIALVGGRNASAAGLHLAELLAEDLAAHLTVVSGLARGIDGIAHTAAMRTG
                     RTVAAIAGGLDVAYPAENTNLQRLIGERGAVITEAAPGTQPQARHFPRRNRLIAGLSL
                     GVVVVEAARRSGSLITARIAQELGREVFAVPGSPLDPRARGGNDLLREGAILTETAED
                     VLDNLSGFGALFPARRPANGFAEDGFDGEASCVSEPVDQLDDPSELNRARSQVVGLLG
                     PTPVKVDDLVRRCQLSPAAVLAVLLELELAGRVETLPGNRFALLTTAGT"
     gene            4848..>5154
                     /locus_tag="VHX39_26185"
     CDS             4848..>5154
                     /locus_tag="VHX39_26185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019089708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HEX3994679.1"
                     /translation="MSDVVVVESPAKAKTINRYLGGGYTVLASFGHVRDLRDKDGSVR
                     PDQDFQMDWESDARGEKQVGAIVKALKGAKILYLATDPDREGEAISWHVRTMLEDKKA
                     "
BASE COUNT          883 a         1549 c         1689 g         1033 t
ORIGIN      
        1 tgcctgggaa gaagccgacg gaagtctggg tcacgaactg ctggtgaccg ttacgcttga
       61 ggacctgggt tccaggaccc ggctgaccct gcgccagggg gtgttcgact cggtcgagtg
      121 gcgcgattcg cacgtccttg gctggaccag ctgcatcgaa cgtttcgccg actatgtgac
      181 aacagggtag gagagaaatc atgcaacacc aaatcgtatc ggctgaggaa tggactgcag
      241 cgcggcagca attgctggct gaggaaaagc aactgacccg gatgcgcgat caactcagtg
      301 agcaccggcg ggagctgcct tgggtcaagg tcgacaagac ctacgtgttc gacgggccga
      361 acggccgcga gacgctggcc gatttgttcg acgggcgtag tcagttggta gtccggcact
      421 tcatgttcgg cccagggtgg gaagagggat gtatcgggtg ctcgttctcg gcggaccatt
      481 tggatggcgc actgttgcat ctggcgcaac gcgatgtgac gtttgtcgtg gtctcgcgcg
      541 caccgctggc cgaactgcag gcgtttcggc aacgtatggg ttggcgcttc aagtgggtct
      601 cgtcgtacgg cagcgacttt aattacgact acggcgtatc cttcacaccg gagcagctcg
      661 ccgcaggcaa ggtgacctac aattacaccg aaacggcgaa tgccggcgag gagatgcctg
      721 gcacgagtgt gttctacaaa gatgccgacg gcacaatcgc gcacacctac tcctcgttcg
      781 cccgtggtgg cgagccgtta ttgggcacct atgcgattct cgatatgacg ccaaaaggac
      841 gcgatgaaac cggacccagg ggcaatctga cggattgggt gcggctgcac gaccgctatg
      901 acgagggcag tgcatcctgt tgcgcagcgg actaagcgct acagtcgggc ggcaagggtg
      961 caaagggcgc gcggatcgac gggtggttcg cgcgctccgg aggaaggtga catgaattcg
     1021 tactatcgtt gggtgatcgt tgccgctggc gggttcatgg gttgtgtcgc gatcggctcg
     1081 atcttttcac tgccggtgtt tctgcaacca atgtcggcgg cgaccggttg gtcgcgcact
     1141 gccatttcgc tggccatgac attcgacttc gtcacgatgg gcattgccag tttcggctgg
     1201 ggcatgctga tggaccgggt cggtccccgt atcgtcctgt tggccggcag ttgcatcctg
     1261 ggttcgggcc tggtgctggc cagccggtcc gccacggtcg agcagtttca attgctctat
     1321 ggggtcctgg tcggggcagg cggaggcgcc atttttgcac cactgatggc gaccgtcact
     1381 ggctggtttg accgtcatcg cagcctggca gtctcactgg tgtcggccgg tatgggcgtg
     1441 gcgccgatga cggtggcgcc gatcgcggcg gtgctcgttt cgagatacga ttggcgtttc
     1501 tcgcaacttg tgatcggact tgctgtttgg gcgttgttga ttccggcagc atttttggtg
     1561 cgccgcgccc ctggtctgac cggtaaagga actggggttc gctcggacga gccacaaatg
     1621 accttgcggg ccgcactgac atcacggcca ttcatcgttc tcgccgcggt ctatttcctg
     1681 tgctgcgcga cccattccgg cccgctgttt cataccgtga gctacgcgat ctcctgcggt
     1741 ctgacggtca cggctgcggt ctcaatctac agcgtggaag gactggcagg tctcgtcgga
     1801 cggatagcat tcggattgct tggtgacagg ttcggcgcga aacgaacctt cgtctccggg
     1861 ctatttctgc aggcggcggc ggtcggctgc tatatgctcg tccgtcagca gttcgcgttc
     1921 tattcggtcg cgctcgtctt cgggttcgct tatgcgggca tcatgccgct ttacgcggtg
     1981 ctcgtgcgtg agaactttcc tctgtcgatc attggctcgg ttgtcggcgc cgcaagcatg
     2041 gcgtccagcc tgggcatggc cctggggccg ctggccggcg gtttgatttt cgatacgtac
     2101 gggacgtatc gctggttgta cgttgcatcc gtcctgttcg gacttggagc cgccgtgatc
     2161 atgctgacgt tcaggccggc agagcgccgg gaaggtccca cgctcaatcc tgtcgccgcg
     2221 gagtgaaggt cctgtctaac ctgctggcat cagccgcgag cgaatcttga tttcgtgcgt
     2281 gagtgtctcg tgcactgggc atttatcggc aatttcaatc agtcttgcgc gctctgcgtc
     2341 ggtcaggtcg ccggcgatgg cgatgtcgcg agtgatttcg ccgatattgc cctcggtcgt
     2401 ttcacaatct gcgcaatcct cagcgtggac cctgcggtgc gacagccgca cggaaaagcg
     2461 ttcggctgca atccccttgc gttcggcgta aagccgcatc gtcatcgacg tgcacgcacc
     2521 gagtgcagca agcagatagt cgtaaggacc cggtccggta tcatcgccgc caacagcgac
     2581 cggctcatcc gccgcgacga cgtggcgccc agttcgcacg cgttgggcaa agcgcccggt
     2641 ccgcgtctcg gtcacttcaa ccacgccgtc gggaaggctt tccggatgtt ctccggcggc
     2701 caaatagcgg gaaacccagg tggcgataac gtcggcgacg taggtggcgt ctgaacgttt
     2761 gcgcagcaga tgatccgcgg tatcgagcga cagaaaactc ttgggatgcc gggcggcggt
     2821 gaagatcgcg ctggcattgt cgatgccgac atattcgtcg cgcggcgcat ggcaaaccag
     2881 cagggccttc ttcatgtcag ccagattgtc caggaacgtt tgtctaccaa gatcgtcgag
     2941 aaactgtttc gttatggtga agctgcggcc ggccaaagtg acttcggcgg taccatgctc
     3001 ggcaatgtct gcgagatttg cagcgaagtt gtgcgttacg tgggccgccg aggccggcgc
     3061 gccgattgtc accacggccg tcgcatcggg cacgcgtggc gctgccgcga gcactgccgc
     3121 cccgcccaga ctgtgaccga tcagcaaggc tggcggaccg tggtgttgcc gcaggtaatc
     3181 cgctgccgcc acgagatcgg cgacgttgga cgaaaaattg gtattggcga actcgccctc
     3241 gctgctgccg atgccggtga agtcgaagcg cagcacggcg atgcctcggg atgcgaggcc
     3301 ttcggcaatg cgtgacgccg cgtaaatgtc tttgccgcag gtgaagcaat gcgcgaacaa
     3361 agcgtaggcg cgcggttccg ggggcaggtc gaggcgggcc gccaatattg ccccggtcgt
     3421 tccggggaac tcgacttttc tcgattccat actgcctgct cctgattgag ggggcctcgg
     3481 ggacacatgg cgagcagctg caactgcaac gcttcgacgg gacgggaggg gttaaaatcg
     3541 gcgggatcgt cgggggataa atcccgggtc tcccccgtct gtccttaagc caatcttccc
     3601 gtctttaagc caatcttcac cccccggtgc aaaatcatcc agatacccca ccgggagccg
     3661 cccaatgccc accgaagatg ccatccaacg cctgcgcctc gcgcggaccg agggtgttgg
     3721 accaatcacc tggcgccgtt tgctcgcccg ctaccacaca cctgccgctg ccctggctgc
     3781 ccttccgaac ctcgcgcagg ccggtggtaa agcctcgcca cccgcgacac cgtcgatcgc
     3841 cgaggccaat cgggaattcg agcaaaccga gaaactcggc ggccggctga tcttcattgg
     3901 cgagccggat tacccgccgt tgctggctga cctcgacgat gcgcctccgg tcattgcggt
     3961 ccttggcgac gccgcgttgc tggcagcgcc ggcgatcgcc cttgttggtg gtcgcaatgc
     4021 ctccgccgcc ggcctgcacc ttgccgaact gttggcggag gacctcgccg cccacctgac
     4081 cgtggtatcc gggctggccc gcggcatcga cgggatcgcc cacaccgcgg ccatgcgcac
     4141 cggccgcacg gtggctgcca tcgccggggg gctcgacgtt gcttacccgg cggagaatac
     4201 caatttgcaa cgactgatcg gcgaacgagg cgcggtgatc actgaagccg ccccaggcac
     4261 ccaaccgcag gcacgccact tcccccgccg caaccgactg atcgcgggcc tgtcgctcgg
     4321 cgtcgtggtg gtggaggcag cgcgccgctc cggcagcctg atcacggccc gcattgccca
     4381 ggagttgggg cgtgaagtgt ttgcggtgcc aggctcgccg ttggacccgc gggcgcgtgg
     4441 cggcaacgat ctgctgcggg aaggcgcgat cctgaccgaa actgccgagg acgtgctgga
     4501 caacctgtcc ggcttcggtg ccctgttccc ggcccgccgg ccggcgaatg gattcgccga
     4561 ggatggattc gatggggagg cctcttgcgt ttcggaaccg gtggaccaat tggatgaccc
     4621 gtcagaactc aatcgggcgc gatctcaggt tgtcgggcta cttggcccca ctcccgtaaa
     4681 ggttgacgat ctggtgcggc gctgccagtt gtctcccgcc gccgtgctgg cggtcctcct
     4741 tgaactggag cttgccgggc gcgtggagac actgccggga aaccggttcg ctttgttgac
     4801 gaccgccgga acgtagatca ccgccgaggg gatccaaacg gaacgccatg tctgatgtag
     4861 ttgtcgtaga atcgccggcc aaagccaaaa ccatcaaccg ctatctgggc ggcggctaca
     4921 ccgtgctggc aagcttcggt cacgtgcggg atctgaggga taaggacggc agcgtccgtc
     4981 ccgaccagga cttccagatg gactgggaat cggacgcccg cggcgaaaag caggtcggcg
     5041 ccatcgtcaa ggcgctgaaa ggcgcgaaaa tcctgtatct cgcgaccgac cctgaccgcg
     5101 agggcgaggc gatctcctgg catgtccgca cgatgctgga ggacaaaaag gcgt
//
LOCUS       DATAVD010001367         3182 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3106991, whole genome shotgun sequence.
ACCESSION   DATAVD010001367 DATAVD010000000
VERSION     DATAVD010001367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3182
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3106991"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..966)
                     /gene="ispG"
                     /locus_tag="VHX39_26190"
                     /gene_synonym="gcpE"
     CDS             complement(<1..966)
                     /gene="ispG"
                     /locus_tag="VHX39_26190"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEX3994680.1"
                     /translation="MSYRPYQEIHRRASRRVYVGKVPVGDGAPISVQTMTNTLTTDVA
                     GTVAQIHRAEAAGVDIVRVSCPDQPSALALKDIVAQVSVPIVADIHFHYRRAIEAAES
                     GAACLRINPGNIGSDERVKEVVKAAREHGCSMRIGVNAGSLERHLLEKYGEPNPEALV
                     ESALYHANILQQHDFHDFKISVKASDVFLAVAAYQQLAEVCDHPLHIGITEAGGRRMG
                     TVKSAIGLGSLLWAGIGDTLRVSLSDEPEEEVRVGWDLLKSLGIRHRGVKVISCPSCA
                     RQGFNVIETVQILEDRLAHIETPLTLSIIGCVVNGPGEALMTDLGL"
     gene            complement(1243..2325)
                     /locus_tag="VHX39_26195"
     CDS             complement(1243..2325)
                     /locus_tag="VHX39_26195"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3994681.1"
                     /translation="MAIRDETRMLLESMTRLFEDHCTKQVADAAETGIFAQSLWDQVA
                     ESGVPLAALPESAGGADAEWSDLYAVLRVAGRFSAPIPLAETMLAGWAAASCGLETSD
                     GPMTVGPVRSSDTLTLARDGNGWRLSGTASRLPYASFATRTILIADSPDGEMVVALDG
                     TGGSELAKGKNIANESRDTLTFNDVRLSSDQAAPVKAGVSRAALYRRGALARATMMSG
                     ALEKAMDLAVTYAQERQQFGRPISKFQAVQQNLAVLAGQTAAAVAAANLGIEALSSAD
                     PEREAFLIAVAKTRVGEAATLACEIAHQVHGALGFTKEYALQLSTRRLWSWREEFGGD
                     PEWAATVGAYACQRGADALWPMLTDE"
     gene            complement(2347..>3182)
                     /locus_tag="VHX39_26200"
     CDS             complement(2347..>3182)
                     /locus_tag="VHX39_26200"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3994682.1"
                     /translation="GTEEQKDYFLPRIAAGELTFCIGMSEPNSGSDLAGTRTRAVKVD
                     GGYKINGTKLWTSNAHRADYAILFCKMSGDGREEPDRHAGATQFLLDLKTPGIDIRPV
                     INLLGEHHFNEIFLTDVFVPDNRLLGKEGNGWNQVTSELSFERSAPDRFLVLFQMLRE
                     MLRMAGPTPDRATAAALGKLISQLATLRSMSISIAGMLQEGLNPNNESAVVKDLGTRY
                     EQDIPVVARQLFPTEPELEAIDLYSSMIARSTMNAPRFSIQGGTREILRGIIARGLGL
                     R"
BASE COUNT          580 a         1016 c          963 g          623 t
ORIGIN      
        1 caggccgagg tcagtcatca acgcctcgcc cggcccattc accacgcagc cgataatcga
       61 cagcgtcagc ggcgtttcaa tatgcgcgag ccggtcttcc aggatctgta ccgtttcgat
      121 cacattgaaa ccctgtcgcg cgcacgaagg gcacgagatc actttcacgc cgcgatgtcg
      181 gatgccgagg gacttcagca aatcccagcc gacgcgaacc tcttcctccg gctcgtcgga
      241 cagcgaaacg cgcagcgtat cgccgatccc agcccacaac agcgagccga gaccgatcgc
      301 tgacttcacg gtgcccatgc gccggccacc cgcctcggta ataccgatat gcagtgggtg
      361 atcgcagacc tcggcgagtt gctgatacgc agcgaccgcc agaaacacat ccgacgcttt
      421 cacgctgatt ttgaagtcat gaaaatcatg ctgttgcagg atgttggcgt gatagagcgc
      481 gctctcgacc agcgcctcgg ggttcggttc gccgtatttc tccagcaagt gccgctccag
      541 cgagccggcg ttgaccccga tccgcatcga gcagccgtgc tcgcgtgccg ccttcaccac
      601 ttctttcacg cgttcgtcgc tgccgatatt ccccgggttg atgcgcaggc aggcggcacc
      661 gctttccgct gcctcgattg cccgtcggta gtggaaatgg atgtccgcga cgatcggcac
      721 gctgacctgt gccacgatgt ccttcaacgc cagagcgctt ggctggtctg ggcacgacac
      781 gcggacgatg tcgacgcccg ccgcctcggc acggtggatc tgtgccacgg tcccggcaac
      841 atcggtcgtc agcgtattgg tcatggtctg caccgagatt ggcgcgccgt cgccaaccgg
      901 gaccttgccc acatagaccc gccgcgacgc acggcggtgg atctcctgat agggccgata
      961 gctcatgtgc aaactcccaa ttgcatcctg acgccagact ccaggtgccg ggtacgcgtc
     1021 cccggcctcc gcatatgcag agtagagcgt ctcaccctgt aagataagtg agccggagcc
     1081 gcttcgccag ggaccgcact tcctgaaacc gcaatgtcac aatcctgggc cgcgcgtcat
     1141 caatgcccgg ataccgtgat cgacttcagc tggtccggat cctgttcagt catccactgc
     1201 ggcccatatg acacggtttt cataagatat tttcattttt gcctactcat cggtgagcat
     1261 cggccagagc gcgtcggctc ccctttggca ggcgtatgcg ccgaccgtgg cggcccattc
     1321 cggatcgccc ccgaactctt cacgccatga ccacaatcgg cgagtggaga gctgcagcgc
     1381 atattctttg gtaaaaccga gcgcgccgtg gacctgatgg gcaatttcac acgccaaggt
     1441 tgcagcctca ccaacccggg ttttggcaac ggcaatcaga aacgcctcgc gctccgggtc
     1501 ggcggacgac aaggcctcga tcccgaggtt ggccgccgcc accgccgccg ccgtctggcc
     1561 ggcgagcacc gcgagatttt gctgcacggc ctgaaatttc gagatcggcc gcccgaactg
     1621 ctggcgttcc tgtgcatagg tgaccgcgag gtccatcgcc ttttccagcg cgccggacat
     1681 catggtggcc cgcgccagcg cgccacgacg gtacaatgcg gcgcgtgaca ccccggcttt
     1741 gacgggtgcg gcctggtccg aggacagccg cacgtcgttg aaagtgagcg tgtcgcgtga
     1801 ctcgttggcg atgtttttcc ctttggcgag ctcgctgcca ccggtgccgt ccaacgcgac
     1861 caccatctca ccgtctggac tgtcggcgat caggatcgtg cgggtggcga aagacgcgta
     1921 gggcaacctc gaggcggtgc cggagagacg ccagccgttg ccatcgcgtg ccaaggtcag
     1981 cgtgtcggat gagcgaaccg ggccgacggt catcggccca tcgctggttt ccagcccgca
     2041 cgatgcggcc gcccaaccgg ccagcatggt ttccgccaac gggatcggcg ccgagaaacg
     2101 gccagcgacg cgcaggacgg cataaaggtc ggaccactcg gcatcggcgc cgccagccga
     2161 ctcgggcagc gctgccaatg gcacaccgga ttctgcgacc tggtcccaca gggattgtgc
     2221 aaatattccg gtttccgcag cgtcggcgac ttgtttggtg cagtgatcct caaacagccg
     2281 ggtcatgctt tccagcagca tccgggtttc gtctcgaata gccatggccg ttttcccttc
     2341 tgcgctttat ctcaggccga gaccgcgggc gatgatgccg cgcaggattt cccgtgtgcc
     2401 gccctggatc gaaaaacgcg gcgcgttcat cgtcgagcgg gcgatcatcg agctgtaaag
     2461 atcgatcgct tccagctccg gttcggtcgg aaacaattgc cgcgccacga ccggaatgtc
     2521 ctgttcgtaa cgggtgccaa gatctttgac gaccgctgac tcgttgttcg gattgaggcc
     2581 ctcctgcaac atcccggcga tcgagatcga catgctgcgc aacgttgcca gttgcgaaat
     2641 aagtttgccg agtgcagcgg cggtggctcg atcgggtgtt ggaccggcca tgcggagcat
     2701 ttcgcgcaac atttgaaata acacgaggaa ccggtcgggc gcgctgcgtt cgaacgacag
     2761 ctcgctggtg acctggttcc agccattgcc ttccttgccc aacaggcggt tgtccggcac
     2821 gaacacgtcg gtgagaaata tttcgttgaa gtgatgttcg cccaacagat tgatgaccgg
     2881 ccggatgtcg atgccgggcg ttttcaggtc gagcaggaat tgtgtggcgc cggcatggcg
     2941 atcgggttct tcgcggccgt cgcccgacat tttgcagaac aggatggcgt agtcggcgcg
     3001 gtgcgcgttg gaggtccaca gcttggtacc gttgatctta tagccgccgt cgactttgac
     3061 agcccgcgtg cgggtgccgg caaggtcgga gccggagttg ggctcgctca tcccgatgca
     3121 gaaggtcaac tcaccggcag cgatgcgcgg caagaagtag tccttttgtt cctcggtacc
     3181 aa
//
LOCUS       DATAVD010001368         2415 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_877939, whole genome shotgun sequence.
ACCESSION   DATAVD010001368 DATAVD010000000
VERSION     DATAVD010001368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_877939"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..466)
                     /locus_tag="VHX39_26205"
     CDS             complement(<1..466)
                     /locus_tag="VHX39_26205"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3994683.1"
                     /translation="MMLHGIDLEVTRLGSGPPVVLLHGFQQIEPETRFLQALSRRAEV
                     IAPSHPGFGRSARPKDFETIYDLANFYAAFLDALPFEKVTLVGFSFGGWLAAELAVRS
                     CHKIARLVLVDTVGIKISDRETADITDVFNTHPDTVKRLTWHSLENAPDFDAM"
     gene            complement(479..1807)
                     /locus_tag="VHX39_26210"
     CDS             complement(479..1807)
                     /locus_tag="VHX39_26210"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994684.1"
                     /translation="MQATDLVGRSETGLFGLTSYQWKVFLVTWLGWALDSTDFGLFSF
                     VLRPAVTDLLGGHATPAQIGSVGGYLAMAGLLGWAFGGFLFGIVADYIGRVRTLAISI
                     LVFSVFTACQGFSQTPFQLGLFRFLAGVGTGAEGVVGIALVAEVFAQTNRAKVLGIMM
                     TGGAFGPLIGGQIYNLVGPYGWRSVFFVGIIPALLLLMLRRGVREPDHFKTVQDRRSA
                     VKAAGGMASQADQAFMRFSFTQLFSRELRFNTGVGLLFCLGTLLSIWTSLIWLPTIQS
                     LMLQKQGITGGAAIPYVGYGMMLWGIGGILGYGSFGFIADFLGRKPTILFFNVGAIAS
                     GLVLYLALKTWDYYPLMLPVFGYFVFGVFSGHAVYLPELFPTHVRATAVSFCNGSGRI
                     ITSFGPLVAGLLVVPFGTFNNAAAVMTCFAVLSMIAMLLGRETRDDELPQ"
     gene            complement(1852..>2415)
                     /locus_tag="VHX39_26215"
     CDS             complement(1852..>2415)
                     /locus_tag="VHX39_26215"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3994685.1"
                     /translation="MADDAAGLITALGHQKAHVFGTSLGSIIAQALAVRHPAVVDRLV
                     LSAAIRIGRSVADIAPETAAELGRLRADPARNGMAIARYFYTEDHLAQHPELAQRFAG
                     SKRTPAQQARRGALIPGAPLLPLGGITAPTLVLAHAEDRLIPPAHSLGIAAEIPGART
                     VVLDGLGHVGTIQAPERVAAVVRGFLS"
BASE COUNT          527 a          807 c          705 g          376 t
ORIGIN      
        1 acatcgcgtc gaagtctgga gcattctcca gcgaatgcca cgtcagccgc ttcacggtat
       61 ccggatgcgt attgaacaca tcggtgatat cggccgtctc ccggtcgctg atcttgatgc
      121 cgacggtatc caccagcacc agacgagcaa tcttatggca ggaccggacg gcaagttccg
      181 ccgccagcca tccgccgaag gagaatccga ccagcgtgac tttttcgaac ggcagcgcat
      241 cgagaaacgc ggcatagaag ttcgccaggt cataaatcgt ttcaaaatcc ttaggccgag
      301 cggagcggcc aaacccggga tgagatggcg cgatcacctc tgcccgccgc gacagcgctt
      361 gcaaaaagcg tgtctctggc tcgatctgct gaaacccgtg cagcagcacg accggcggtc
      421 cggaacccaa ccgggtcact tccaaatcga tcccatgcag catcatgttt tcactccctt
      481 actggggtag ttcgtcgtcg cgggtttcac gccccagcag catggcgatc atgctgagca
      541 ccgcgaaaca cgtcatcacc gccgccgcgt tgttgaaggt gccgaacggc accaccagca
      601 agcccgcgac cagcggcccg aaactggtga tgatccgccc cgaaccgttg cagaacgaca
      661 ccgcggtcgc ccgcacatgg gtcggaaaca attccggcag atagaccgca tggccggaga
      721 acacaccgaa cacgaaatag ccgaaaaccg gcagcatcag cgggtagtag tcccaggtct
      781 tgagcgcgag atacaggacc agaccgctgg cgatggcgcc gacattgaag aacaggatgg
      841 tcggcttgcg gcccaggaaa tcggcgatga agccgaagct gccatagccc aggataccgc
      901 cgatgcccca cagcatcatg ccgtatccga cataggggat cgccgcgccg ccggtgatac
      961 cttgcttctg cagcatcagg ctttggatcg tcggcaacca gatcaggctg gtccagatcg
     1021 acaacaaagt tcccaggcag aacaacagcc ccacgccggt gttgaagcgc aattcccggg
     1081 aaaacaactg ggtgaacgag aaccgcatga acgcctggtc ggcctggctc gccatcccgc
     1141 cggcagcctt caccgccgaa cgcctgtcct gcacggtctt gaaatggtcg ggttcacgga
     1201 ctcccctgcg cagcatcaac aagagaagtg cggggatgat cccgacaaaa aacaccgaac
     1261 gccagccgta cggaccaacc aggttgtaga tctggccgcc gatcagcggc ccgaacgccc
     1321 cgcccgtcat catgatcccc agcaccttcg ctcggtttgt ctgggcaaac acctcggcaa
     1381 ccagggcgat gccgaccacg ccttccgcgc cggtcccgac gccggccagg aaacggaaca
     1441 atccaagctg gaacggggtc tgcgaaaacc cctggcacgc ggtgaacacg ctgaacacca
     1501 ggatgctgat cgccagcgtg cggacgcgtc cgatgtagtc cgcgacaatg ccgaacagga
     1561 agccgccgaa agcccaaccc agcagtccgg ccatcgcgag atagccgccg acgctgccga
     1621 tctgcgccgg ggtcgcatgg ccgcccaaca gatcggtgac cgccgggcgc aggacgaagg
     1681 agaacaggcc gaaatcagtc gagtccagtg cccaccccag ccacgtcacc aggaacacct
     1741 tccattggta gctggtcagc ccaaacagtc cggtttcgct acgaccgacg agatcggtgg
     1801 cttgcataat ctactcccgt tggcgcggac tcttgcggtc cgctgtattt ttcaggacag
     1861 gaagccacgg accaccgccg ctacccgttc cggtgcctgg atcgtgccca catggccaag
     1921 cccgtcaagc acgacagtgc gagcaccggg gatttcggcg gcgatgccca gactgtgcgc
     1981 cggtggaatc agcctatcct ctgcatgtgc caacacaagt gtcggggcgg tgatgccgcc
     2041 cagcggcagc agcggcgcac ccggaatcag cgcaccgcgc cgcgcttgtt gcgccggcgt
     2101 gcgcttgctg ccagcgaaac gttgtgccag ttcgggatgt tgcgccagat ggtcttccgt
     2161 ataaaaatac cgcgcgatcg ccatcccatt gcgagccggg tccgcacgca gccggcccag
     2221 ctcagccgcg gtttccggag cgatatcggc aacactccgc ccgatgcgga tcgcggccga
     2281 cagcaccagc cgatccacca ccgccggatg gcggaccgcc agcgcctggg cgataatgct
     2341 gccgagcgag gtgccgaaaa catgcgcttt ctggtgtccc agtgcggtga tcagacccgc
     2401 cgcatcgtcg gccat
//
LOCUS       DATAVD010001369         4254 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1248021, whole genome shotgun sequence.
ACCESSION   DATAVD010001369 DATAVD010000000
VERSION     DATAVD010001369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4254
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1248021"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..476)
                     /locus_tag="VHX39_26220"
     CDS             complement(<1..476)
                     /locus_tag="VHX39_26220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HEX3994686.1"
                     /translation="MLISLGAVALSMFYGGLPAFRKFGIGFLFDTAWDPVHKNFGAAV
                     PIYGTLVTSAIAMLISVPISFGIAVFLNEVCPAVLRRPIASAIELLAGIPSIIYGMWG
                     LFVFVPFMSNYIEPWLTDNLGPLPLIGFLFEGPPLGIGMLTAGIILAVMVIPFISS"
     gene            complement(669..1679)
                     /gene="pstS"
                     /locus_tag="VHX39_26225"
     CDS             complement(669..1679)
                     /gene="pstS"
                     /locus_tag="VHX39_26225"
                     /inference="COORDINATES: protein motif:HMM:NF008171.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HEX3994687.1"
                     /translation="MRFTSRLLAAAFCCALAVPAFAQQITGAGSTFVYPILSKWSEAY
                     SKITGAQINYQSIGSGGGIAQIKAATVDFGASDAPLPPDQLSQLGLAQFPVVIGGILP
                     VVNLEGIEPGQMRFTGPLLADIYLGKIKKWNDPAIAAVNPGVKLPDQAVTVVHRSDGS
                     GTTYNWVDYLSKVSPEWKAKVGIGTSVSWPTGVGGKGNEGVAEYVNRIKGAIGYVEYA
                     YVLQNKMKYGQVKNEAGKFIKPSIASFQAAAASAEWSKVQDFDLVMTDAPGADAYPVT
                     ATTFILMYKQPKDAARSHAALAFFKWAFDKGADLATSLDYVPLPPPLVQQIETYWQAQ
                     IH"
     gene            1883..2743
                     /locus_tag="VHX39_26230"
     CDS             1883..2743
                     /locus_tag="VHX39_26230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3994688.1"
                     /translation="MEISEAAAAFGALSQDTRLELIRLLIAEGATGLQPRDIAARLSI
                     PTSTLSFHLAALERAGLTQSTRQGRQMVHAVRFAGLRRLLAFLTDACCAGHPELCGDI
                     ARLLPPLPDEDQGMTPAFNVLFLCTHNSARSIIAEAILRQIGGTRFNAYSAGSDPIPE
                     PSPEVIARLRALGHDTATLRSKSWHEFTGPDAPRMDFVITLCDTLEGPVCPDFGALTV
                     TAAWPLPDPLKFTGSPVERAAMLNELYASLRRRLEIFTALPFASLDRIAMKARLDEIG
                     VGMRMPTGGR"
     gene            2746..3789
                     /locus_tag="VHX39_26235"
     CDS             2746..3789
                     /locus_tag="VHX39_26235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArsJ-associated glyceraldehyde-3-phosphate
                     dehydrogenase"
                     /protein_id="HEX3994689.1"
                     /translation="MRVGINGMGRIGRLTLRAAMGGMFRPADDPRADNRLDVVHVNEL
                     KGGAATTAHLLEFDSIHGRWRENVGHEDDRAVLIGNRRIGFTAEPTAGGVAWGDLGCD
                     IVLECTGKFLKTEQLAGYFERGVKKVIVAAPVKEGGALNIVVGINDHLYHRREHRLLT
                     AASCTTNCLAPVVKVLHDAVGIRHGQITTIHDPTNTNVVVDAPHKDLRRARSAMQSLS
                     PTTTGSATAIALIYPELKGKLNGHAVRAPVLNASLTDCVFEMKRPVTVNEINGLFRDA
                     AAGPLAGILGFETRPLVSADYNNDTRSAIVDAPSTMVTDDTLLKVYAWYDNEVGYACR
                     MVDLANIVMERGV"
     gene            3786..>4254
                     /locus_tag="VHX39_26240"
     CDS             3786..>4254
                     /locus_tag="VHX39_26240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994690.1"
                     /translation="MMSSGVRNYAIVTTAYFLFTITDGALRMLVLLHFYSLGYTPFIL
                     AFMFLLYESAGIFANAGGGWLASRYGIPRMLMAGQITQIAGLLMLSALSPTWGAAISV
                     AWVVLAQGIAGVAKDLTKTSSKSAIKASSTQDMGQLFRWVAWFTGSKNATKGAG"
BASE COUNT          833 a         1303 c         1317 g          801 t
ORIGIN      
        1 atggaggaaa tgaaagggat caccatcacc gccagaatga tgccggcggt gagcatgccg
       61 atgccaagcg ggggaccctc aaacagaaag ccaatcagcg gcagcgggcc aagattgtcg
      121 gtgagccagg gttcgatata attcgacatg aagggtacga agacaaagag accccacatg
      181 ccataaatga tgctgggtat accggcgagc aactcgatcg cggaggcgat cgggcgacgc
      241 agcactgcgg ggcagacttc attgagaaac actgcgatgc cgaaactgat cggcaccgag
      301 atcagcatgg cgatcgccga ggtcaccagc gtcccgtaga tcggcaccgc ggcgccgaaa
      361 ttcttatgta ccggatccca ggccgtatca aagaggaacc cgatcccgaa tttcctgaac
      421 gccggtagac cgccatagaa catggacagc gcgacggcac ccaggctgat cagcacaaac
      481 catgcggcac cggccgcggc acttcggaag agcgattcgc caaggcgggg tgatttccga
      541 tgtggtctat cgtcgccgat agaccggacg gaggatattg atgcctctga catgcaatga
      601 gcgaccttat agcataggcg aaatcgcgag gcgcggcaga cgccgatcgc gcccgccgcg
      661 atagacgttt agtgaatctg agcctgccaa taggtctcga tctgctgcac aagcgggggc
      721 ggcaacggca cataatcgag cgaggttgcc aaatccgcgc ctttatcgaa ggcccacttg
      781 aagaaggcaa gcgcggcatg gctgcgggcc gcgtctttgg gctgcttgta catcaggatg
      841 aaggttgtcg ccgtgacggg ataggcgtcc gcgcccggcg cgtcggtcat caccaggtca
      901 aaatcctgaa ccttgctcca ttcggcgctg gcggccgcgg cctggaacga cgcgatgctc
      961 ggcttgatga atttgccggc ctcgttcttg acctggccat atttcatctt gttttgcagg
     1021 acatacgcgt attcaacgta gccgatcgcg cccttgatcc gattgacgta ctcggcgacg
     1081 ccctcgttcc ccttgccgcc aaccccagtc ggccaggaaa ccgacgtgcc gatgccgacc
     1141 tttgctttcc actccgggct gaccttcgac agatagtcga cccagttgta ggtggtgccc
     1201 gagccatcgg agcggtgcac gaccgttacc gcctgatccg gcagtttgac gccgggatta
     1261 accgcggcga tggccggatc gttccacttt ttgattttgc caagatagat atcggccaga
     1321 agcgggccgg tgaagcgcat ttgccccggc tcaatccctt ccagattaac gaccgggagg
     1381 ataccgccga tcacaaccgg aaactgggca aggccaagtt gcgacaactg gtctggaggc
     1441 aatggagcat ccgaggcgcc aaaatcgacg gtcgcggcct tgatctgggc gatcccgcca
     1501 cccgaaccga tcgattgata gttgatctgc gcgcccgtga tcttgctgta ggcctcggac
     1561 catttcgaca ggatcggata gacgaaggtc gatcccgcgc ctgtaatctg ctgtgcaaag
     1621 gccggcacgg cgagcgcgca gcagaaagcc gctgcgagca gccttgaagt gaaccgcatg
     1681 agtttctccc cgaaagtaca gccgggacgc gtcgccgagg cagcgcctgg gcgatcgtcc
     1741 ccaggatttc tagaagcatg gaatctcaga ggggatgaag cttatatgac acgcccccga
     1801 gggcgctcac aagtccggcc gcaagggagt tttattaatt tctccacttg caaactgaat
     1861 tctattctat aattctagaa ttatggaaat atcagaggct gccgcagcct tcggggcgct
     1921 gtcgcaagac accagacttg aactgatccg tctcctgatc gctgaggggg cgaccgggct
     1981 tcaaccccgc gatatcgccg cgcgcctgtc tatccccact tcgaccctct cctttcatct
     2041 cgcggcgttg gagcgcgccg gcctgaccca atccacccgc caagggcggc agatggtcca
     2101 tgcagttcgg ttcgccgggt tgcgccggct gctggcgttt ctcaccgatg cctgttgcgc
     2161 cgggcatccg gaattgtgtg gcgatatcgc tcgccttctc ccacccctcc ccgatgagga
     2221 ccaaggcatg accccggctt tcaacgtgct ctttctgtgc acgcacaact ccgcccgctc
     2281 gatcattgcc gaggctatcc ttcggcagat tggcggcacg cgatttaacg cgtattctgc
     2341 cgggtccgat ccgatcccgg aacccagtcc cgaggtcatc gcaagactgc gggcactggg
     2401 ccacgatacc gccaccttac gcagcaagtc gtggcacgaa ttcactgggc cggatgcgcc
     2461 gcggatggat ttcgtcatca cgctgtgcga cacgctggag gggccggtct gccctgattt
     2521 cggcgcgctg accgttacgg ccgcatggcc tctgccggac ccgctcaagt tcaccggcag
     2581 cccggtcgaa cgagccgcga tgctgaacga actttacgcc agccttcggc ggcgtctcga
     2641 gatcttcacc gcgctgccgt tcgcgtcact cgaccgtatc gccatgaagg ctcggctgga
     2701 cgagatcggc gtcgggatgc gcatgccgac gggagggcgc tgacaatgcg tgttgggatc
     2761 aatgggatgg gccgcatcgg ccggctcacg ttgcgggctg cgatgggcgg aatgttccgt
     2821 ccggctgatg acccgcgggc ggacaaccgc ctcgatgtcg tgcatgtgaa cgagttgaag
     2881 ggcggtgctg ccaccactgc ccacctgctg gaattcgaca gcatccacgg ccgctggcgg
     2941 gagaatgtcg gccatgaaga tgatcgtgcc gtactgatcg gcaatcgccg catcggattc
     3001 accgccgaac cgaccgccgg gggggtggct tggggtgatc tgggctgcga catcgtgctg
     3061 gaatgcaccg gcaagttcct gaagaccgag cagcttgcgg gatacttcga acggggcgtg
     3121 aaaaaggtga tcgttgctgc gccggtgaag gagggcggtg ccctgaacat cgtcgtcggc
     3181 atcaacgacc atctgtatca ccggcgggag caccgattgc tgacggcggc gtcctgcacg
     3241 acgaactgtc tggcgcccgt ggtcaaggtc ctgcacgacg cggtgggcat tcgccacggc
     3301 cagatcacca ccatccatga tccgaccaat accaatgtgg tcgtcgatgc gccccacaag
     3361 gatctgcggc gcgcacggtc ggcgatgcag tcgctgtcgc ccaccacgac cggcagcgcc
     3421 acggccatcg cgctgatcta tccggaactg aagggcaagc tgaacggcca cgccgtgcgc
     3481 gcgcccgtgc tgaacgcaag cctcaccgat tgcgtgttcg agatgaagcg gccggtcacg
     3541 gtgaatgaaa tcaacggcct gttccgcgat gcggccgccg ggccgctggc cggcatcctc
     3601 gggttcgaga cgcgtcccct ggtctcggcc gattacaaca acgatacgcg cagcgcgatc
     3661 gtcgatgcac ccagcacgat ggtgacggac gacacgctgc tgaaggtcta tgcctggtac
     3721 gacaacgagg tcggctatgc gtgccgcatg gtggaccttg ccaacatcgt catggagcgg
     3781 ggggtatgat gtcttccggg gtccgcaact acgccatcgt cacgaccgcc tactttctgt
     3841 tcaccatcac cgacggtgcg ctgcgcatgc tggtgctgct gcatttctac agcctgggct
     3901 acacgccctt catcctggcg ttcatgttcc tgctgtatga gtcggctggc atcttcgcca
     3961 acgccggcgg cggttggctg gcgtcacgct acggtattcc gcgcatgctg atggcgggcc
     4021 agatcacgca gattgccggg ctcctgatgt tgtcggcgct gagtccgacc tggggtgcgg
     4081 ccatctcggt ggcctgggtc gtgctggcgc agggcatcgc cggcgttgcc aaggacctga
     4141 caaagacctc gtcaaaaagc gccatcaagg cgtcatcgac acaggatatg gggcagttgt
     4201 tccgctgggt cgcctggttc accggatcga agaatgcgac caagggcgcc ggtt
//
LOCUS       DATAVD010001370         1883 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_502938, whole genome shotgun sequence.
ACCESSION   DATAVD010001370 DATAVD010000000
VERSION     DATAVD010001370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_502938"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..770
                     /locus_tag="VHX39_26245"
     CDS             <1..770
                     /locus_tag="VHX39_26245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MlrC C-terminal domain-containing protein"
                     /protein_id="HEX3994691.1"
                     /translation="SQAGLSAVVVTDGDAAAAQRLVTRLLDAAWDARQSFTFQTELLA
                     ESVARAKVLDGPVVMLDHCDNSSSGGTMDTTTVLAEIMRQGLEDVVFFGIYDPDAVQA
                     AMHAGVGATVELRLGGRMQMPSIPGKNEPLPVRGRVRTLSAGYFVSESPMRAGVAVTM
                     GPMAVLDTGKVEIVLISRHAEPSDLGLFKVVGIDPAKKRYVAIKSRVHWRADLGSLAK
                     HVVECNGLGVCTSDYGILKFDHVRRPIYPLDLINERA"
     gene            complement(798..>1883)
                     /locus_tag="VHX39_26250"
     CDS             complement(798..>1883)
                     /locus_tag="VHX39_26250"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3994692.1"
                     /translation="SGLRVGVIGTGSSGVQMIPLIAQQAKHLFVFQRTANFSLPARNG
                     PMDPAIEATHKSEYPARRAAAYETPFGIAGFPPPVKSALEASAEERDAKYEAKWAEGG
                     SISFLYSYTDLLVNKASNDTASEFVRNKIRSIVRDPAVAELLAPKNHPIGTKRLCLDT
                     NYYETYNRDNVTLVDARSNPIQEITETGIRTSAGEYELDAIVFATGFDAMTGALREID
                     IRVGNGPTLAEKWAGGPLTYLGLMVSGFPNMFTITGPGSPSVKTQMIVAIEQHMDWIG
                     DCLATLRARGMRRIEPSPEAERDWVQHVNDVADSTLYPLANSWYMGVNIPGKPKVFMP
                     YVGGFAGYKKKCDAVAANNYEGFVLSR"
BASE COUNT          362 a          553 c          569 g          399 t
ORIGIN      
        1 tttcgcaggc gggattgagc gcggtggtgg tgacggacgg ggatgcagcc gcagcccaac
       61 gcctcgtaac ccggttgctg gatgcggcat gggacgcacg gcagtcattt acctttcaaa
      121 ccgaactgct tgcggaatcc gttgccaggg cgaaagtgct ggatgggccg gtggtgatgt
      181 tggatcattg cgacaactct tcctcgggcg gtaccatgga tacgaccacc gtgctggcgg
      241 agatcatgcg gcaaggactg gaggacgtcg tgttcttcgg catttacgac ccggacgcgg
      301 tacaggcggc gatgcatgcc ggagtcggtg ccacagtcga actgcgcctc ggtggccgta
      361 tgcaaatgcc gtccattccg ggcaaaaacg aaccgctgcc ggtgcgcgga cgggtgcgca
      421 ccttatcggc agggtacttt gttagtgaaa gcccgatgcg ggccggggtg gctgtcacga
      481 tgggtccgat ggcggtgctg gacaccggca aagtggagat cgtgctgatc agccgccatg
      541 ccgagcccag tgatctggga ttgttcaagg tggtagggat cgatccggcg aagaagcgtt
      601 acgttgcgat caaaagccgg gtgcactggc gagctgacct tgggtctctg gcgaaacatg
      661 tggtggaatg caacgggctt ggcgtttgca cctcggatta cgggattctg aagttcgacc
      721 atgtgcggcg gccgatctat ccgttggatt tgatcaacga acgagcgtaa cggaccgcag
      781 cgacggaggg ctggtcgcta ccgtgacaac acaaaccctt cgtagttgtt cgctgccacc
      841 gcatcgcact tcttcttgta tccggcaaaa cctccgacat acggcatgaa caccttcggc
      901 ttacccggaa tgttcacccc catgtaccac gagttcgcca gtgggtataa cgtgctgtcc
      961 gctacgtcgt tgacgtgctg gacccagtcg cgctcggcct ccgggcttgg ttcgatccgc
     1021 cgcatcccgc gtgctcgcag cgtggccaga cagtcgccga tccagtccat atgttgctcg
     1081 atcgccacga tcatctgcgt ctttacggat gggctgccag gcccggtaat ggtgaacatg
     1141 ttcgggaacc ccgacaccat cagcccaaga taggtcaacg gcccacccgc ccatttctct
     1201 gccaaagtcg ggccattgcc gacccgaatg tcgatttctc gaagcgctcc ggtcatcgcg
     1261 tcgaacccgg tggcaaacac gatcgcgtcc agttcgtact ccccggccga ggttcgaatc
     1321 cccgtttcgg tgatttcctg gattggattg ctgcgtgcat ccaccaacgt cacgttgtca
     1381 cgattatagg tttcgtaata attggtatcc agacacagcc gcttcgtgcc aatcggatga
     1441 tttttcggcg ccagaagttc cgccacagcc gggtcacgca caatggaacg gatcttgttg
     1501 cgcacgaact ccgacgccgt atcgttcgat gccttgttca ccagcaggtc ggtgtaggaa
     1561 tacagaaaac tgatgctgcc cccttcggcc catttcgctt cgtatttggc gtcgcgttct
     1621 tcagcgcttg cctcaagcgc cgacttcacc ggcggaggaa atccagcgat cccgaacggt
     1681 gtctcataag ctgccgcccg gcgagcagga tattcagact tatgcgtggc ctcgatcgcc
     1741 ggatccatcg gtccgttgcg cgccggcagg ctaaaattcg ctgtccgctg aaacacgaac
     1801 aagtgctttg cctgctgcgc gatcagcggg atcatttgca cgccggagga accggtgccg
     1861 atcacgccaa cgcgcaggcc gga
//
LOCUS       DATAVD010001371         5906 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_690325, whole genome shotgun sequence.
ACCESSION   DATAVD010001371 DATAVD010000000
VERSION     DATAVD010001371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5906
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_690325"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="VHX39_26255"
     CDS             <1..269
                     /locus_tag="VHX39_26255"
                     /inference="COORDINATES: protein motif:HMM:NF012759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEX3994693.1"
                     /translation="AKSDCMGRTDRMADDSLLHLIAGTLGIDPAEVTEDSDISNTRKW
                     DSLRQIMLMTELETQYGCQFSDQQMLETTSVAKIRAVLTLQGVA"
     gene            complement(281..1381)
                     /locus_tag="VHX39_26260"
     CDS             complement(281..1381)
                     /locus_tag="VHX39_26260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994694.1"
                     /translation="MTDAALSDRDLVLQFESLGDSCELGLVQRRVGAEPLGMFRFAGA
                     PLRHLIRAMEARFEGMADPGHVRVQPENGEYMIKLTKYDFIYHAHVKIGEADPVALHR
                     QQVRNVGFLIDKLVADLEKPEKIMVFRQNEELAANDLLDFRSVLAAYGPATLLWVQAA
                     RPGRPPGSVTVVDDTLMVGHVTRLARRDNAPDFDLPSWLAMLRNAYAIRPACPPMPSV
                     AAAKPSAPKRIDVVFGKDGNAAACVGNGWSSPENGFTWSIDQRSVLTMTKPAAANLYR
                     LEMEVIPFVAPPALTAQPLDVTINGERIHSFDPLPRGKVECAVPARLLQGAGTVEIVL
                     DHPAATSPRVAAGQNDDRRLAVAFYRVSLIGG"
     gene            1539..3374
                     /locus_tag="VHX39_26265"
     CDS             1539..3374
                     /locus_tag="VHX39_26265"
                     /inference="COORDINATES: protein motif:HMM:TIGR01686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIC family phosphatase"
                     /protein_id="HEX3994695.1"
                     /translation="MPDPATSTAAFLSALGPGDKPPGLPSIFQVGDRVFEAAINASAI
                     PAGTPRQRIAVLGALTTDYLTRAVACSVVQEGVFPFVYQAPFGSYVQDVLDAGSGLYG
                     FDPELVHIAPDWRDLVVPLPLHASAEAVDTALAPRVALFRTMWGRLAGNGAKIIQHVL
                     VPPVRRHRGMAERVTQASPANQVRRLNDMLDEAGRGLVTWVDMPTLAREIGTRRFAPA
                     KFYHAARLDHDPKWLPDYLSLFRAAWRSASGRAKKVLVLDLDNTLWGGVIGDDGVEGI
                     ALGPGSPAGEAFSEWQHYVKELGERGVILAVCSKNDPAVAAAGFEHPASVLGRADFAA
                     FECSWNDKAGGLRRIAGELNVGIDSFVFCDDNPAECDLVRRELPEVAVVCLGADPAAF
                     IDLFDAGHWLDADHYTQEDLGRAAAYSARAAALAEQATAADIAGYLTGLDMKGSLQRP
                     GAADIARVAQLELKTNQFNLTTRRYGEAAIRGFLGRDDAIVLTFRLTDRFGDHGLTST
                     LIAFHESDTVRIDSWLMSCRIFSRSAEQFMMRGLIAIAAGLGARRLLGEYLPTPKNNV
                     VADLYPRLGFTVAEGSFFVRDIGATDDLVTYVTDAQTTLVSPPST"
     gene            complement(3341..4090)
                     /locus_tag="VHX39_26270"
     CDS             complement(3341..4090)
                     /locus_tag="VHX39_26270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3994696.1"
                     /translation="MGLFDLTGRRALITGSSQGIGFALARALGGAGAAVVLNGRDAGK
                     LEAAAAVLRGEGMAVEIAPFDVTDHAAVGDAVARLGTLDVLVNNAGIQRRAPLEDFPE
                     ATWHELMRTNLDSVFYVAQAVARGMIARKRGKIINICSVQSELGRPSIAPYAASKGAV
                     KMLTKGMCADWARHGLQVNGLGPGYFETELTAALVADPAFSDWLCKRTPAGRWGRVEE
                     LAGAAIFLASEASDFVNGQIIYVDGGLTSVV"
     gene            4186..5223
                     /locus_tag="VHX39_26275"
     CDS             4186..5223
                     /locus_tag="VHX39_26275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-idonate 5-dehydrogenase"
                     /protein_id="HEX3994697.1"
                     /translation="MRAAVIHAPHDLRVEDTPEQPVGANDVKVRIGAGGICGSDLHYY
                     HHGGFGTVRIQEPMILGHEIAGTVIATGSAVTGVRAGDKVAVNPSLPCGTCRYCLDGR
                     SNHCLDMRFYGSAMRTPHVQGGFREELVCTSGQAIKLPPDVAITEAAFAEPLSVCLHA
                     ARQAGPLLGKRVLVTGTGPIGALIIMVARHAGAREIVTTDLLDPPLALARKIGTDRTI
                     NTRAEPNGLDGYAADKGTFDVVFEASGAPQALAAAITVARPGATIVQVGIGADATPPV
                     ALNTLVAKEITLRGTFRFHEEFAWAVDFITSRRIDVRPLLTEIVPLADAVRAFDLASD
                     RSRAMKVLLAF"
     gene            5345..5887
                     /locus_tag="VHX39_26280"
     CDS             5345..5887
                     /locus_tag="VHX39_26280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEX3994698.1"
                     /translation="MKHWTLACLIGLTLLGACSHSDEDAQSANGSGGAAGMGPGGMGP
                     GGMGAGGAGGGGGASNAAPGSEEDLVQSAGDRIFFDTDRNSLNPQAIATLDKQSGWLR
                     QYPQVNVWVAGNCDERGTEEYNLALGQRRATADRDYLVAHGVQRSRIETISYGKSRPI
                     DAGSTPEAWAQDRNAITSVR"
BASE COUNT         1065 a         1965 c         1848 g         1028 t
ORIGIN      
        1 ccgcgaaatc ggattgcatg ggaaggactg accgcatggc ggatgattcg ttgttgcact
       61 tgatcgccgg gacgctgggg atcgatccgg cggaggtcac cgaggactcc gatatatcca
      121 acacgcgcaa atgggacagt cttcggcaga tcatgttgat gaccgaactc gaaacacaat
      181 acggctgtca gttcagcgac cagcagatgc tggaaaccac ctcggtggcg aaaatacgag
      241 cagtgctgac acttcagggc gtggcctgac tgccgcagga tcagccgccg atcaacgata
      301 cacgatagaa cgccaccgcg aggcgccgat cgtcattctg tccggcggcc acgcgcggac
      361 tggttgccgc gggatgatcg agcacgatct ccaccgtgcc cgcaccttgc agcaagcgcg
      421 cgggaacggc gcattcaacc ttgccgcggg gcaacggatc gaagctgtga atccgttcgc
      481 cgttgatcgt gacatccagt ggctgtgcgg taagcgcggg tggcgcgaca aaggggatga
      541 cttccatttc cagccgatag aggttcgccg cggccggctt tgtcatcgtt agaacgctgc
      601 gctgatcaat ggaccaggtg aagccattct cggggctcga ccacccattg cccacacatg
      661 ccgccgcgtt gccgtctttt ccgaacacga cgtcaatccg ctttggcgca gatggtttcg
      721 ctgccgccac cgacggcatg ggcggacaag ccggacggat cgcgtaggca ttgcgcagca
      781 tcgccagcca ggaaggcaga tcgaaatccg gtgcgttgtc ccgccgggcc agccgtgtca
      841 cgtgaccgac catcagcgtg tcatcgacga ccgtcaccga accggggggc cgaccgggcc
      901 gggctgcctg cacccacagc aaggtggccg gaccgtaggc ggccagcact gaccggaaat
      961 ccagcaggtc attcgccgcc aattcctcat tctggcgaaa aaccatgatt ttttcgggct
     1021 tttccaaatc ggcgaccagc ttgtcgatca gaaagccaac gttgcggacc tgctgccggt
     1081 gcagggcgac gggatcagct tcgccgatct tcacatgggc atgatagata aaatcgtatt
     1141 tggtcagctt gatcatgtat tcgccgttct cgggctggac gcggacatgt ccgggatccg
     1201 ccatgccttc gaaccgcgct tccatcgccc ggatcaggtg ccgcaacgga gcaccggcaa
     1261 accggaacat gccaagcggt tctgccccca cccggcgctg cacgagaccc agctcgcaac
     1321 tgtcgcccag actttcgaac tggaggacga gatcgcgatc ggacaatgcc gcatcagtca
     1381 tgatgtcgat acccgttatg caatctggaa tctccgccga acgtcgcgtg acccggttat
     1441 agacggccgt cgcgattgcc cgcaacgaac gctgtctgcg cgcgcggatg gattgtagac
     1501 tatgctgaaa tcgtcgtgtg gaaggacttc gcgacctcat gcccgatccg gccacctcga
     1561 ccgcggcgtt cctgtcggcc ctgggtccag gcgacaaacc acctggcctg ccgtcgatct
     1621 ttcaggttgg cgaccgggtt ttcgaggccg caatcaacgc gtccgcgatc cccgccggca
     1681 cgccacggca acgcatcgcg gtcctgggcg cgctcaccac ggactacctg acccgagcgg
     1741 tcgcgtgttc tgtggtgcag gagggggttt ttccgtttgt ctatcaggcg ccgtttggct
     1801 cctatgtgca ggacgtgctg gatgcggggt caggcctgta tggttttgat cccgaactgg
     1861 tgcatatcgc gccggactgg cgcgatctgg ttgtgccgct gccgcttcat gcctcggccg
     1921 aagccgtgga cacggcactg gcgccgaggg tcgcattgtt cagaacgatg tggggacggc
     1981 tggccggcaa cggtgcgaaa atcatccagc atgtcctggt tccgccggtg cggcgccatc
     2041 gcggcatggc ggagcgagtg acgcaggctt cgccggcgaa tcaggttcgt cggctgaatg
     2101 acatgctgga cgaagcagga cgcggactcg tgacctgggt cgatatgccg acactggcaa
     2161 gggaaatcgg cacacgccgg tttgcaccgg cgaaattcta ccacgccgcc agactggacc
     2221 acgatccgaa atggctgccg gattacctgt cgctgtttcg tgccgcctgg cgatcggcca
     2281 gcggacgagc gaagaaggtg ctggtgctcg atctcgacaa cacgctgtgg ggcggggtta
     2341 tcggcgatga cggtgtggag ggcattgcac tcggtccggg atctccggcc ggtgaggcgt
     2401 tctcggaatg gcagcattat gtcaaggaat tgggtgagcg aggggtcatt ctcgctgtct
     2461 gctcgaagaa tgatccggcg gtggcggcag ccgggtttga gcaccctgcc agcgtgcttg
     2521 ggcgggcgga tttcgccgcg ttcgaatgtt cctggaacga caaagcgggc ggcctgcgac
     2581 ggatcgccgg cgaattgaat gtcggcatcg acagttttgt cttctgcgac gacaacccgg
     2641 cggaatgcga cctggtacgg cgggaattgc ccgaggtggc ggttgtctgc ctgggcgccg
     2701 accccgccgc attcatcgat ctgttcgacg ccgggcactg gctggacgcc gatcactaca
     2761 cgcaggagga ccttggacgt gctgccgcct acagcgcccg cgccgcggca ttggcggagc
     2821 aggcgacggc agccgatatc gcgggctatc tgaccggcct ggacatgaaa ggatccctgc
     2881 aacggcccgg agcggccgat atcgctcgtg ttgcccagtt ggaactgaag acgaaccagt
     2941 tcaacctcac gacccgccgc tatggcgaag cggcgatccg ggggttcctg ggccgggacg
     3001 atgccatcgt attgacgttc cggctgaccg accgtttcgg cgatcacggc ctgacatcga
     3061 ccctgatcgc cttccacgaa agcgacaccg tacggatcga cagctggctg atgagctgcc
     3121 ggattttctc gcgttcggcg gaacagttca tgatgcgcgg cctgatcgcg atcgcggcag
     3181 ggttgggggc gaggcgcttg ctgggagaat atcttccgac tcccaagaac aatgttgtcg
     3241 cggacctgta tcctcggctt ggcttcaccg tggcggaagg atcgttcttc gtgcgcgaca
     3301 tcggcgcgac agacgatctg gttacatatg taacggacgc tcagaccacg ctggtcagcc
     3361 cgccatccac gtaaatgatc tgcccgttca cgaaatccga cgcctccgac gccaggaaaa
     3421 tcgccgcgcc cgccagttcc tcgacccgcc cccagcgtcc ggccggcgtc cgcttgcaca
     3481 gccagtcgga gaatgcggga tcggccacca acgccgctgt cagttccgtc tcgaagtagc
     3541 ccggaccgag cccgttcacc tgcaggccgt gcctggccca atcggcacac atgcctttgg
     3601 tcagcatctt caccgccccc ttgctcgccg catacggggc gatgctcggt cgccccaact
     3661 cgctctgcac cgaacagata ttgatgatct tgccccgctt gcgcgcgatc atgccgcgcg
     3721 ccaccgcctg ggccacgtaa aacacgctgt ccaggttggt gcgcatcagt tcatgccacg
     3781 tcgcttcagg gaaatcctcc agtggcgcgc ggcgctggat gccggcgttg ttgaccagca
     3841 cgtcaagcgt acccagccga gcgaccgcgt cgcctacggc ggcatgatcg gtgacgtcga
     3901 aaggggcgat ctcgaccgcc atgccctcgc cacggagcac cgcggcggct gcctccagct
     3961 tcccggcgtc ccgcccgttc aacaccaccg cggccccggc accacccaac gctcgggcca
     4021 gcgcgaaacc gatcccttgg ctggaccctg tgatcagggc acgacgcccc gtcagatcga
     4081 acaatcccac gcggcattct ccctggacca agcgggtccc caccggtaag cctagcgccc
     4141 ggccgtcaga ccgcacaacc ggccagcccc acgggagaac cgcccatgcg cgccgccgtt
     4201 atccacgccc cccacgacct gcgggtcgag gacacacccg aacaaccggt cggcgcgaac
     4261 gacgtcaagg tccgcatcgg cgcaggcggc atttgcggat cggacctgca ttactaccac
     4321 cacggcggct tcggcacggt gcgtattcag gagccgatga tcctcggcca cgagatcgcc
     4381 ggcaccgtca tcgcgaccgg ctccgccgtc accggcgtcc gggccgggga caaggtcgcc
     4441 gtcaacccca gcctgccctg cggcacctgc cggtattgcc tggacgggcg gtcgaaccac
     4501 tgcctggaca tgcgcttcta cggcagcgcc atgcgaaccc cccacgtgca gggcggcttc
     4561 cgcgaggaac tcgtctgcac aagcggccag gccatcaagc tgcccccgga cgtcgccatc
     4621 accgaggccg ccttcgccga accgctgtcc gtctgcctgc acgccgcccg ccaggccggc
     4681 ccgttgctgg gcaaacgggt cctggtcacc ggcaccggcc cgatcggcgc gctgattatc
     4741 atggtcgccc gccacgccgg cgcgcgcgaa atcgtgacca ccgaccttct cgacccgccg
     4801 ctggcgcttg cccgcaagat cggcaccgac cgcacgatca acacgcgcgc cgaaccgaac
     4861 ggcctggacg gctacgcagc cgacaagggc acgttcgacg tggtgttcga ggcatcgggc
     4921 gccccgcagg cactcgccgc cgccatcacg gtcgcccgtc ccggcgctac catcgtccag
     4981 gtcggcatcg gcgccgacgc gactccgccg gtcgcactca acaccctggt cgccaaggaa
     5041 attaccctgc gtggcacctt ccgcttccac gaggaattcg cctgggcggt cgacttcatc
     5101 acatctcggc gtatcgacgt ccgcccgctg ctgaccgaga tcgttccact cgccgatgcc
     5161 gtccgcgcat tcgatctggc ctccgaccgc tcacgcgcga tgaaggttct gctggcgttc
     5221 tgaccgggcg ctgtcacgca atcgtccggt atcgcgattc gcgctcgcgc ggtacaagtg
     5281 acaccgcgaa tcggggccac gtccttataa cgcggtggcc ttatcacccg accggagacg
     5341 ttccatgaaa cattggaccc ttgcctgcct tattggcctg accttgcttg gcgcctgttc
     5401 ccactcggat gaggacgccc aaagcgccaa tggatcggga ggagccgccg gtatgggccc
     5461 gggtggcatg ggacctgggg gcatgggcgc gggtggtgcc ggcggcggcg gcggtgccag
     5521 caatgcggcg cccggcagcg aggaagatct ggttcagagc gccggcgacc gcattttctt
     5581 cgacacggac cgcaatagcc tgaacccgca ggcgatcgcg accctggaca agcaatccgg
     5641 gtggcttcgg caatatcccc aggtcaatgt ctgggtcgcc ggcaattgcg acgaacgcgg
     5701 caccgaggaa tacaacctcg cactgggtca gcgccgggcg acggccgatc gtgattacct
     5761 ggtggcccat ggcgtccagc gcagccgtat cgagaccatc agctatggta aatcgcggcc
     5821 gatcgacgcc ggttccacgc ctgaggcatg ggcgcaggac cgcaacgcga ttacatcggt
     5881 acgctgaact tccgcacgct gatcta
//
LOCUS       DATAVD010001372         2013 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1430651, whole genome shotgun sequence.
ACCESSION   DATAVD010001372 DATAVD010000000
VERSION     DATAVD010001372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1430651"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1834)
                     /gene="recG"
                     /locus_tag="VHX39_26285"
     CDS             complement(<1..1834)
                     /gene="recG"
                     /locus_tag="VHX39_26285"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012552960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEX3994699.1"
                     /translation="MDYTLLNPLFAPLTSLRGIGPAVAKLIARATGGANGEGRVIDLL
                     FHMPESYLDRSAHPTIRAARTGMVATMAVEVVRHERPAHSRQPWRIIVRDATGTAELV
                     FFRFTREAQMPPGAQLLVSGKVESFNGRVTIAHPEHVVSAAEAWRIPSIEPVWPMTAG
                     LWPRQVAAGIAQALERLPELPEWHDAALMRREKWPSFREALRAVQMPEAAPPDKRMRA
                     RLAYDEFLAGQVAMALVRGRVRARVGRALTGETGLRATALERFGFAPTASQSRALAEI
                     DADLGSDRRMLRLLQGDVGSGKTLVAALAMLRAVESDAQAALMAPTEVLAKQHHRTLS
                     RLLPVPVALLTGSVKGRERSKLLRGLKDGSLQIIVGTHALFQDAVEYKDLGLAVIDEQ
                     HRFGVTQRLLMGGKGQHTDVLVMTATPIPRTLVLTQWGEMDVSRLTEKPAGRQPIRTT
                     LHSFATMPEVLEGIARKLEEGSQVYWVCPLVAESELIDLAAAEERFVELKLRFGERVG
                     LVHGQQSAEVRDAALAAFAAGTIRLLVATTVIEVGVDVAEASVMVIEHAERFGLAQLH
                     QLRGRVGRGADASFCLLLHDDWVSDIARRRLTLLRDTDDGFLIAD"
     gene            1878..>2013
                     /locus_tag="VHX39_26290"
     CDS             1878..>2013
                     /locus_tag="VHX39_26290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007400566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HEX3994700.1"
                     /translation="MSEPDQVQDDTRRRRLLYRATHRGTFENDLLIGGFVRDHLDTLT
                     E"
BASE COUNT          398 a          708 c          567 g          340 t
ORIGIN      
        1 cgtcggcgat gagaaacccg tcgtcggtgt cgcgcagcaa tgtcagccgg cggcgcgcaa
       61 tgtcggaaac ccaatcgtcg tgcagcaaca agcagaaact agcatccgcg cctcgcccga
      121 cccggccgcg caactgatgt aactgtgcca gaccgaaccg ttctgcgtgc tcgataacca
      181 tcacacttgc ctcggccaca tcgacgccga cctcgatcac cgtcgtcgcc accagcagcc
      241 ggatcgttcc ggcagcgaat gcagccagag cggcgtcgcg tacctcggcc gactgctgcc
      301 catgcaccag accgacccgt tcgccgaacc gcagctttaa ttccacgaac cgttcctcag
      361 ccgcagcgag gtcgatcaat tcactttccg ccaccaaggg gcaaacccaa taaacctgcg
      421 acccttcctc caattttcgt gcgatgcctt ccagcacttc cggcatcgtg gcgaaggagt
      481 gcaacgtcgt gcggatcggt tgccgacctg cgggtttctc ggtcaggcgg gacacatcca
      541 tctcgcccca ctgcgtcaac accaaagtgc gcggaatcgg cgttgccgtc atcaccagaa
      601 cgtcagtgtg ctgacccttg ccgcccatca acagacgttg cgtaacgccg aaacgatgct
      661 gctcgtcgat gaccgccaga ccgaggtctt tgtattccac agcgtcctgg aacaaagcgt
      721 gcgttccgac gatgatctgt aacgatccgt cctttaaccc acgcagtagt ttcgagcgtt
      781 cccggccttt caccgacccg gtcagcaacg ccacgggcac gggcagcagc ctggacaatg
      841 tccggtgatg ctgcttcgcc agcacctccg tcggcgccat taacgccgcc tgggcgtccg
      901 actcgaccgc acgcaacatc gccagtgcag ccaccagcgt cttgccggaa ccgacgtcgc
      961 cttgcaaaag ccgcaacatc cgccggtcgg aaccaagatc ggcatcgatc tccgccaacg
     1021 ccctggactg cgacgcggtc ggcgcgaagc cgaagcgttc cagcgcggtc gctcgcaacc
     1081 cggtctcccc ggtcaacgca cgcccgactc tggcccgcac ccgaccccgc accagggcca
     1141 ttgccacctg gccggcgagg aattcgtcat acgccagccg tgcccgcatc cgcttatccg
     1201 gtggcgctgc ctcgggcatt tgtacagcgc gtaacgcctc ccgaaacgat ggccattttt
     1261 cgcggcgcat cagggctgca tcgtgccact ccggtaactc cggcaaccgc tccaacgcct
     1321 gagcgatccc ggcggcaacc tggcgaggcc ataggcccgc agtcattggc caaactggtt
     1381 cgatcgacgg gatacgccac gcttccgcgg cggaaacgac atgctcggga tgtgcgatcg
     1441 ttacccttcc gttgaaactt tccactttgc cggaaaccag caactgcgcg cccggcggca
     1501 tttgcgcctc acgggtgaaa cgaaaaaaca ccaactcggc ggtgccggtc gcatcgcgca
     1561 cgatgatgcg ccagggctga cgagaatggg cgggccgctc gtgccggaca acctctaccg
     1621 ccattgtcgc caccatacct gtgcgtgcgg cgcgaatcgt tgggtgagcg ctacgatcga
     1681 ggtacgactc gggcatgtgg aacagcaaat cgatcacccg cccttcgcca ttcgcgccgc
     1741 ccgtcgcgcg ggcgatcagc ttcgccaccg ccggacctat gcctcgcagc gatgtcagag
     1801 gtgcgaaaag agggttgagc agagtgtagt ccacgggctg acacgggatt gacgggcggc
     1861 tatatgacag cccaacgatg agcgaaccag accaggtcca ggatgacacc cgccgccggc
     1921 gcctgctata ccgtgccacg catcgcggaa cgtttgagaa cgacctgctg atcggcggtt
     1981 tcgtgcgcga ccacctcgat actctcaccg agg
//
LOCUS       DATAVD010001373         6225 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3669570, whole genome shotgun sequence.
ACCESSION   DATAVD010001373 DATAVD010000000
VERSION     DATAVD010001373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6225
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3669570"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            58..2328
                     /locus_tag="VHX39_26295"
     CDS             58..2328
                     /locus_tag="VHX39_26295"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3994701.1"
                     /translation="MNYIDSGLKVVGTRPIRPDGVDKVTGRAIFAADTRASGMLWGKI
                     LRSPHAHAKIVSIDTTKAEKLPGVQAVVTAKDFPEIANEEAFVGEGPMNFRDLSCNVM
                     ARTKALYEGHAVAAVAATTQAIADEALALIDVKYDVLPFVIDVEDAMADNAPVLHEDM
                     FTGGVNPKPTKPSNVAKVVTFKKGDAEAGFKDAEVIVEGKYTTKPVHQGYIEPHACLA
                     TYAPDGQITIHSSSQGHFMVRAYTAKLLGIDIANIRCTPAEIGGGFGGKTLIYLEPVA
                     VALSRKSGKSVKMQMTREDVFRGSGPTSGASIDIKIGAKKDGTIVAAKQVLKFQAGAY
                     AGSPIGPGCMCGFALYDIENIDVVGYDVVSNRPKVAAYRAPGAPITSFAVESALDELA
                     DKLGVDPLTLREKNAAKNGSKTHYGVTHNNIGFEQVLAAVKTHPHWKSPVPAGQARGF
                     ACGFWFNIGGESSATVHINEDGTVTAATGSPDIGGSRASMGMMVAEVLGVKAEKVRTT
                     VADTGSIGFTFLTGGSRVTFATGMAVTQAAEKVVEELKKRAAMIWEIPADAVEWKDGQ
                     AVPAGSNAGAFEPLDLAAIALKAGRTGGPINAEVSVNAQGAGAGFGAHICDVTVDKET
                     GHVAIERYTAFQDVGKAIHPSYVEGQIQGGAVQGIGWALNEEYIYNDKGQLENPGFLD
                     YRCPVASDLPMIEAVLVEVPNPRHPFGARGVGEVPIIPPMAAIGNAIRRAAGVEMHDL
                     PMSPPKVRAALDAAGK"
     gene            2335..2586
                     /locus_tag="VHX39_26300"
     CDS             2335..2586
                     /locus_tag="VHX39_26300"
                     /inference="COORDINATES: protein motif:HMM:NF014636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HEX3994702.1"
                     /translation="MPKVIIASGGSCHQFTGGKTEFEVQATTFRQLVRELEKNYPGLG
                     SQVEEGMAVAIDGEIFQDAYQVELKPGSEIVLIPKIGGG"
     gene            2586..3254
                     /locus_tag="VHX39_26305"
     CDS             2586..3254
                     /locus_tag="VHX39_26305"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX3994703.1"
                     /translation="MASPGPRLPDQRPAVLLFDWDNTLVDGWIGITAALNAAFDAFEK
                     PRWTVIETKSRVRVALRESFPVMFGDAWERARDIFYDAFRSDHLANVTPMPGAAEALL
                     AGAAWPCGVVSNKAGKYLRAEVVHLGWSAHFGAVVGAGDAAADKPSPEPIFMALKEMG
                     FSPGEDIWYLGDTALDMQAARAAGVTAVLVGDAGHDGGVELASPDLHVHSAHELAAWL
                     KSLA"
     gene            3375..3674
                     /gene="hfq"
                     /locus_tag="VHX39_26310"
     CDS             3375..3674
                     /gene="hfq"
                     /locus_tag="VHX39_26310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEX3994704.1"
                     /translation="MATEKAQNVQDVFLNHVRKSKTPVTVFLVNGVKLQGIITWFDNF
                     SVLLRRDGHTQLVYKHAISTVMPGSPIQLFDASKAESGAAASANVREMSAVAGGD"
     gene            3740..5077
                     /gene="hflX"
                     /locus_tag="VHX39_26315"
     CDS             3740..5077
                     /gene="hflX"
                     /locus_tag="VHX39_26315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEX3994705.1"
                     /translation="MTRAAVILPWERKDRDHGPNGADLNGPGLFGAGLFGAGLNGTGP
                     VRAADARLEEAVGLAASIGLVVVHQAVLPLRARQPATLLGSGQVASLGETISELHVAV
                     AIIDAALSPVQQRNLERAWHCKVIDRTALTLDIFGERAATREGTLQVELAHLAYQRSR
                     LVRSWTHLERQRGGFGFLGGPGETQIEADRRQIDERLVRLKKDLQQVRRTRGLHRSAR
                     KRVPFPVVALVGYTNAGKSTLFNALTGSAVVARDQLFATLDPTMRGLILPSGRRIILS
                     DTVGFISELPHELVEAFRATLEEVAEADIILHVRDAAHPETAAQQSDVLGVLADMERD
                     GTLDPGWRSRLVEVMNKADLLGGVAEVPVRAGGVAVSAITGEGLDTLTEAIDRRIGMG
                     LETADYDIDASDGARLAWLYRHGEVTGRRDDEAQIHVTVRLLPADRARFERRP"
     gene            5074..5892
                     /locus_tag="VHX39_26320"
     CDS             5074..5892
                     /locus_tag="VHX39_26320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HEX3994706.1"
                     /translation="MRTADILTVADLLREAARDKIMPSFRNLSDGAVKMKTGPFDLVT
                     EADEAAEQRIIEDLQREFSGCVVIGEEAASADPTQLNGLADAELAFVIDPIDGTANFA
                     AGLPLFGVMASVFRRGEIVGAVIHDPIGDDSALALRGEGAWFETPDGRRRDMRVAASV
                     PAAEMSGNVSWRFLPEPLRSQVCARLPRVAATWDIRCAAHSYRLTAAGHTHFLFYYRL
                     YPWDHAAGWLLHQEAGGYSARFDGQPYDPADIWSGLICAPDRDGWEAVRAALLE"
BASE COUNT         1142 a         1855 c         2111 g         1117 t
ORIGIN      
        1 caaaatcatt cgcgcggtga tggacgccgc tgcggtcatg cgaggagagg cctcctgatg
       61 aattacattg attccggtct gaaagtcgtc ggcacgcgtc ccatccgtcc cgacggcgtc
      121 gataaggtca ccggccgcgc gatcttcgcc gccgacacgc gtgcctccgg catgctgtgg
      181 ggcaagattc tccgctcgcc gcacgcgcat gcgaagatcg tgtcgatcga tacgacaaag
      241 gcggagaagc tgcctggcgt gcaggcggtc gtgaccgcga aggatttccc ggagatcgcc
      301 aacgaagagg cgttcgtcgg cgaaggccca atgaatttcc gtgatctgtc ctgcaacgtc
      361 atggcgcgga ccaaggccct gtatgaaggc cacgcggttg ccgcggtcgc tgccaccacg
      421 caggcgatcg ctgacgaggc gctggcgctg atcgacgtga aatacgacgt gctgccgttc
      481 gtcatcgacg tcgaggacgc gatggccgac aacgcacccg ttctgcacga agacatgttt
      541 accggcggcg tcaacccgaa gcccacaaaa ccatcgaacg tcgccaaggt cgtgactttc
      601 aaaaaaggcg acgccgaggc cggcttcaaa gacgcggaag ttatcgtcga gggcaagtac
      661 accaccaagc cggtgcacca gggctatatc gagccgcatg cctgcctcgc gacctacgcg
      721 ccggatggcc agatcacgat ccacagttcg agccagggcc atttcatggt tcgcgcgtat
      781 acggcgaagc tgctcggcat cgacatcgcg aatatccgtt gcacgccggc agaaatcggc
      841 ggcggtttcg gcggcaagac gctgatctat ctcgagccgg ttgccgttgc gctgtcgcgc
      901 aagtcgggca aatcggtaaa aatgcagatg acccgcgagg acgtgttccg cggttccggt
      961 ccgacctcag gcgcatcgat cgacatcaaa atcggtgcga agaaagacgg caccatcgtc
     1021 gcggcgaagc aggtgctgaa attccaggcg ggtgcttatg ccggctcgcc gatcggccca
     1081 ggctgcatgt gcggttttgc gctctacgat atcgagaaca tcgacgtcgt cggttatgac
     1141 gtggtcagca accgtccgaa ggttgccgcc tatcgcgcgc ccggcgctcc gatcacctcc
     1201 ttcgccgttg agagcgccct cgacgaactc gccgacaaac tgggcgtgga cccgctgaca
     1261 ttgcgggaga agaacgcggc gaagaacgga tccaagacac attacggcgt gacccacaac
     1321 aacatcggct tcgagcaggt gcttgcggct gtcaaaaccc atccgcattg gaagtcgccg
     1381 gtgccggcgg gtcaggcgcg cggtttcgcc tgcggcttct ggttcaacat tggcggtgaa
     1441 tcgagcgcga cggtgcatat caacgaggat ggcacggtca cggcggccac cggcagcccg
     1501 gatatcggcg gctcgcgggc ctcgatgggc atgatggtgg ctgaggtgct tggcgttaaa
     1561 gccgagaagg tgcggaccac cgtggccgac accggctcga tcgggttcac gttcctgacc
     1621 ggcgggtccc gcgtcacgtt tgccaccggc atggcggtca ctcaggcggc cgagaaagtg
     1681 gtcgaggaac tgaaaaagcg cgccgccatg atctgggaaa tccccgctga cgccgtggaa
     1741 tggaaagacg gccaggcggt tcccgccggt tccaacgccg gcgcattcga gccgttggat
     1801 ctggcggcca ttgcgctgaa ggccggccgg accggtggtc cgatcaatgc cgaggtgtcg
     1861 gtcaatgcgc agggtgcggg tgccggcttt ggcgctcata tctgtgacgt gacggtggat
     1921 aaggaaaccg gccacgtcgc gatcgagcgt tacaccgcgt tccaggatgt cggcaaagcg
     1981 atccacccca gctatgtcga gggccagatc cagggtggtg ccgtgcaagg catcggctgg
     2041 gctctgaacg aagagtacat ttacaacgac aagggccaac tggagaaccc gggcttcctg
     2101 gattaccgct gcccggtggc ctcggatttg ccgatgatcg aggccgtgct ggtggaagtg
     2161 cctaacccgc ggcatccgtt cggggcacgc ggcgtgggcg aggtgccgat cattccgccg
     2221 atggcagcga tcggcaatgc catccgccgc gctgccggag tggaaatgca cgacctgccg
     2281 atgtctccgc caaaagtccg cgccgcactc gatgcggcag ggaaatgagt tcgcttgcct
     2341 aaggtcatca tcgcttcggg cgggtcttgc caccagttca ccggtggcaa gaccgagttc
     2401 gaagtgcagg caacgacctt ccgtcagttg gtgcgcgagt tggaaaaaaa ctatccgggc
     2461 ctcggcagcc aggtcgaaga aggcatggcg gtcgcgatcg atggtgagat tttccaggat
     2521 gcttaccagg tcgaactgaa acccggcagc gaaattgtgc tgatcccgaa aatcggcggc
     2581 ggttgatggc atcgccgggt ccgcgcctgc cggaccaacg gccggccgtt ctgttgttcg
     2641 actgggacaa tacgctggtc gatggctgga tcggcatcac cgcggcactg aatgccgcgt
     2701 tcgatgcctt cgaaaaaccg cgctggaccg tgatcgagac caaatcccgg gtcagggtcg
     2761 ctctgcggga aagtttcccg gtcatgttcg gcgacgcctg ggagcgtgcc cgggacatct
     2821 tctacgacgc gttccgcagc gaccatctgg ccaacgtcac tcccatgccg ggtgcggccg
     2881 aagctctgct tgccggcgct gcctggccgt gtggcgtggt ctcaaacaag gccggcaaat
     2941 atctgcgtgc cgaggttgtt cacctcggtt ggtcggccca ttttggcgcg gtcgtcggtg
     3001 ccggggatgc tgctgccgat aaacccagtc cggagccgat cttcatggca ttgaaggaaa
     3061 tgggtttttc tccaggggaa gacatttggt atctcggtga caccgcgctc gacatgcagg
     3121 cggcgcgggc ggcgggggtg accgcagtgc tggtcggcga tgccgggcat gatggcggtg
     3181 ttgaactggc ttcacccgat ctccatgtgc attccgccca tgaactggcg gcctggctaa
     3241 aaagcctggc ctgagccatg atgggctggt agcgtgcaca ggccggtggt tctgccagga
     3301 ccagccggga cgtcaacaac aggcatcttt caactctcgc cgtgacacac ggcgaaatca
     3361 aaaggaccat gcaaatggcc actgaaaaag cgcagaacgt tcaggacgtt ttcctgaacc
     3421 atgtgcggaa gagcaagaca ccggtgacgg tgtttctggt gaacggggtc aagctgcagg
     3481 ggatcattac ctggtttgac aatttttccg ttcttttgcg gcgcgacggg catacccaac
     3541 tcgtctataa gcatgccatc agcacagtga tgccgggctc tccgatccaa ctgttcgatg
     3601 cctccaaggc cgagagcggc gctgcggcgt ccgccaacgt gcgcgagatg agtgccgtcg
     3661 ccggtgggga ttaacgacgg ggattaacca cctggagacc gagagaccaa catcacctcc
     3721 ggtgacgaac gggccggctg tgacccgcgc ggctgtcatc ctgccctggg aacggaagga
     3781 ccgtgaccat gggccgaatg gcgcggacct gaatggccca ggactgtttg gcgcaggact
     3841 gtttggcgca ggactgaatg gcacaggacc ggtgcgtgcg gccgatgcgc ggcttgagga
     3901 agccgtgggg ctggctgcgt ccatcggcct tgtcgtcgtg catcaggcgg tcctgccgtt
     3961 gcgcgcgcgt caacctgcga ccttgcttgg gtcggggcag gtggcctcgc ttggcgagac
     4021 gatctccgaa ctgcacgtcg cggtggccat catcgacgcg gctttgtcgc cggtgcagca
     4081 gcgcaatctg gaacgggcct ggcattgcaa ggtgatcgac cggacggcgt tgaccctcga
     4141 catcttcggg gagcgggcgg cgaccaggga aggcaccttg caggtcgaac tggcgcatct
     4201 ggcgtatcag cgctccaggc tggtgcggtc ctggactcac ctggaacgtc agcgcggcgg
     4261 ctttggcttc ctcggcggcc cgggcgagac gcagatcgag gccgaccggc ggcaaatcga
     4321 cgaacggctg gtgcgattga aaaaggacct gcaacaggtc aggcggaccc gcggcctgca
     4381 tcgcagcgcc cgaaaacggg tgccgttccc ggtggtcgct ctggttggct ataccaacgc
     4441 cgggaagtcg acgctgttca acgcgctgac cggatcggcc gtggtggcgc gcgatcagtt
     4501 gtttgccacg ctggatccga ccatgcgcgg gctgatcctg ccctccggcc ggcgtatcat
     4561 tctgtcggat acggttgggt tcatcagcga actgccgcac gaactggtgg aggcgtttcg
     4621 cgccacactg gaggaagttg ccgaggccga catcattctg cacgtgcgcg acgccgcaca
     4681 ccccgaaacg gctgcgcaac agtcggacgt acttggggtg ctggccgaca tggagcgcga
     4741 cggcacgctc gatcccggct ggcggtcgcg cctcgtcgag gtcatgaaca aagccgatct
     4801 gcttggcggt gtggctgagg ttccagtgcg ggcgggtggc gtggccgtgt cggcaatcac
     4861 cggcgaaggg ctcgacacgt tgaccgaggc aatcgaccgc cgcatcggca tgggcctgga
     4921 aacggccgac tacgacatcg acgcgtcgga tggcgcccgg ctggcctggc tgtatcggca
     4981 cggtgaagtg accgggaggc gcgatgacga agcccagatc catgtgaccg tccgcctgct
     5041 gccggccgac cgggctcgct tcgagcggcg gccgtgagaa cggctgacat tctgaccgtg
     5101 gcagacctgc tgcgggaggc tgcccgcgat aagatcatgc cgtcgtttcg caatctctcg
     5161 gacggtgcgg tcaagatgaa gaccggtccg ttcgacctgg tgaccgaggc cgacgaggcg
     5221 gcggaacagc gcataattga agacctgcaa cgggagtttt ccggttgcgt ggtgatcggc
     5281 gaggaggcag caagtgccga tcccacccag ctgaatggcc tcgccgatgc cgagcttgct
     5341 ttcgtgatcg atccgatcga cgggacggca aactttgccg ctggtctgcc gctgttcggc
     5401 gtgatggcat cggtgttccg gaggggcgag atcgtcggcg cggtgatcca tgatccgatc
     5461 ggcgatgact cggcgctcgc gttgcgcggc gagggggcgt ggttcgaaac gccggacggc
     5521 aggcggcgcg atatgcgggt ggcggcctcc gtgccggcgg ccgagatgag cggcaatgtg
     5581 tcgtggcgct tcctgcccga gccgttgcgc tcacaggtct gtgcgcgcct gccgcgggtg
     5641 gcggcgacct gggatatccg atgcgctgcg cattcctacc gcctgacggc agccggccat
     5701 acgcacttcc tgttctatta ccggctgtac ccgtgggacc acgcggccgg ctggctgctg
     5761 catcaggagg ctggcggata ttccgcgcgg ttcgatgggc aaccgtacga tccggcagat
     5821 atctggagcg gactgatctg cgcgccggat cgcgacgggt gggaggcagt gcgggcggca
     5881 ctgctggagt gagggcggca gaggtcgggg tttcaccccg aaccccgacc agaggcgctg
     5941 cctctggact ccgccaaggg cggcggccct tggaaccatt cattttggtt ggggaatggg
     6001 agagggccga ccgtggcgct tgtcaaagtc cgtgtcggcc ctcacccatt ccccaaccaa
     6061 tggacagatt gcaaaggtcc tcgacctttg ctggaggtcc aggaggcaac gcctcctggt
     6121 gggttcaagg gcgaagccct ggcgcttcgc cggcaatgac cgggacggag cgcgtggcat
     6181 gacccatccc atgttgcgaa cggaatcgct cagcaagagt ttcac
//
LOCUS       DATAVD010001374         2474 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3292091, whole genome shotgun sequence.
ACCESSION   DATAVD010001374 DATAVD010000000
VERSION     DATAVD010001374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2474
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3292091"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1079)
                     /gene="hisS"
                     /locus_tag="VHX39_26325"
     CDS             complement(<1..1079)
                     /gene="hisS"
                     /locus_tag="VHX39_26325"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEX3994707.1"
                     /translation="MTDLQPARGTHDLIGPDQRRHRHVVETARDVAAGYGFEEWITPI
                     FEDTRVFSRTLGETSDVVTKEMYTFEDRGGDSITLRPEATAGICRALVSNGLTQSLPQ
                     KVFVAGPMFRYERPQKGRYRQFHQIDIELIGPSEPLADAEVIACGWDILKALGVHKDT
                     VLELNTLGDTASRAAYREALVAYFTANQAQLSKDSLVRLERNPMRILDSKDERERELI
                     AGAPKIWPYLSPEAAGFYGKVQEHLARFGVPFRENPGIVRGLDYYGHTAFEFVTSQLG
                     AQGTVMAGGRYDGLVSEMGGPATPAVGLAAGVERLAMLLDAVPPTSAPVAVVPIGEAA
                     EAVAIGILQSLRAAGIRAEMAYRGNL"
     gene            1345..>2474
                     /locus_tag="VHX39_26330"
     CDS             1345..>2474
                     /locus_tag="VHX39_26330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3994708.1"
                     /translation="MRQLRVVAVVVIVLLVCACLVDVMIRTLAPGGWTVAKAVMLISC
                     LLAAPWVGFCAANGLIGFLLRLPRPAVPPPVTVDGDLPRTAIALTVRNEDMGLVLPPI
                     RRLLHGLDAAGVGGAFALFILSDTIDKAAAEAEARAISSFQADEPARVHYRRRQQNTG
                     FKAGNVMEFLEHHADGYDLMLVLDADSDMTPEAVLRLVTAMRDEPSLGIIQHLTVGLP
                     ASSAFPRLFQFGMRAGMRTWATALSWWQDDSCVYWGHNAVIRIAPFREHCKLPLLPTG
                     EPILSHDQIEAAILRGAGWKIRLLAEEDGSCEANPPALPEFMHRELRWLAGNFEYRHL
                     LTMPGLRPMGRWQLIQAMLLFATTPFYVTFLLATAWASATDLV"
BASE COUNT          427 a          806 c          772 g          469 t
ORIGIN      
        1 agattgccgc gatacgccat ctcggcgcga atgccggccg cacgcaacga ctgcagaata
       61 ccgatcgcaa ccgcctccgc cgcctcaccg atcggcacga cggcgaccgg cgcggacgtc
      121 ggcgggacgg cgtcgagcag catggccaga cgctccaccc cggctgcaag accaaccgca
      181 ggcgtggccg gaccgcccat ctcgctgacc aggccgtcgt agcgcccgcc ggccatgacc
      241 gtaccctgcg cgccaagctg cgaggtcacg aactcgaacg cggtgtggcc gtaatagtcc
      301 aaacccctga cgatgcccgg attctctcga aatggcacgc caaacctcgc cagatgctcc
      361 tgcaccttgc cgtaaaaccc tgctgcctca ggcgacagat acggccagat cttgggtgca
      421 ccggcgatca gttcgcgctc ccgctcatcc ttgctgtcca ggatgcgcat cggattacgc
      481 tccagccgca ccaggctatc ctttgaaagc tgcgcctggt tggcggtgaa gtaagccacc
      541 agtgcctccc ggtacgccgc ccggctggcg gtatctccaa gcgtgttcag ctccagcacc
      601 gtgtccttgt gcacaccaag cgccttgaga atatcccagc cgcaggcgat cacttcggcg
      661 tcggcgagcg gctcggacgg accgatcagc tcgatgtcga tctggtggaa ttgccggtag
      721 cggcctttct gcggccgttc gtagcgaaac atcgggccgg ccacgaagac cttctgcggc
      781 agcgactggg tcagaccgtt gctgaccaga gcgcggcaga tcccggcggt ggcctcggga
      841 cgcagagtga tcgaatcacc gccgcgatcc tcgaacgtat acatttcctt ggtcacgacg
      901 tcggaggttt cgccaagggt acgggaaaac acccgcgtat cctcgaagat cggcgtgatc
      961 cattcctcga agccgtaacc tgccgcaaca tcgcgcgctg tttcgaccac gtggcgatga
     1021 cggcgctggt ctgggccgat cagatcgtgg gtgccgcggg cgggttgcag atcggtcacg
     1081 tgaggccttg ccagtgggta tcggtcacga atgtgcgacc aaaagatgat ggcccgccgg
     1141 tcgttcggtc gggttcaggc ccactgatat agtacgaatc ctcccgtggg aacggtcact
     1201 ggcgcaaagc cgccgcgtaa cggtaacaca gccgagggtg gcggcagacc tgcaccgccg
     1261 cacaagcggg gtcgacggca atcatggtgg cagcgtgatg ggttggtgtc gttcctgcga
     1321 ccaggcggcc tcgggcgagg cgcgatgagg cagcttcggg ttgtggcagt cgttgtcatc
     1381 gttctgctcg tgtgtgcatg cctcgtggat gtaatgatcc ggacgttggc accgggcggt
     1441 tggacggtgg ccaaagcggt catgctgata agttgcctcc ttgccgcccc ttgggttggc
     1501 ttttgtgcag ccaacggcct gatcggtttt cttctgaggc tgccgcggcc cgccgttccg
     1561 ccacccgtca ccgtcgatgg cgacctgccg cgaaccgcca tcgcgctcac ggtccgcaac
     1621 gaggatatgg gcctcgtttt gccgccgatc cgccggctgc tgcacgggct ggacgctgct
     1681 ggggttggcg gagcgttcgc tctgttcatc ctgtcagaca ccatcgacaa ggccgcagca
     1741 gaggcggaag cgcgcgccat ctcatcgttc caggccgacg aacctgctcg cgtccattac
     1801 cggcgtcggc agcaaaacac cggcttcaag gccggcaacg tgatggagtt cctggagcat
     1861 cacgccgacg gctacgatct gatgttggtc ctggacgcgg attccgacat gacaccggag
     1921 gcggtcctgc gactggtgac cgcgatgcgc gatgagccgt ccctcggcat tatccagcac
     1981 ctcacggttg ggttgccggc atcgtcagcc ttccctcgcc tctttcagtt cggcatgcgt
     2041 gccgggatgc gcacctgggc taccgcgctt tcctggtggc aggacgattc ctgcgtctac
     2101 tggggccaca atgccgtcat ccggattgcg ccctttcgag agcactgcaa gctgcccctg
     2161 ttgccgaccg gcgaaccgat cttgtctcat gatcagatag aagcggcgat attgcgcggt
     2221 gccggctgga aaatccgcct gctggccgag gaggatggtt cctgtgaggc caatccaccc
     2281 gctctgcccg agtttatgca ccgcgaactg cgctggctgg cgggcaattt cgaatatcgg
     2341 catttactga ccatgcccgg attgcggccg atgggacgat ggcaactgat ccaggcaatg
     2401 ctgctgttcg ccaccacacc attctacgtc accttcctgc tcgccaccgc ctgggcatcg
     2461 gcaaccgacc tggt
//
LOCUS       DATAVD010001375         3003 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1430783, whole genome shotgun sequence.
ACCESSION   DATAVD010001375 DATAVD010000000
VERSION     DATAVD010001375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3003
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1430783"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..502)
                     /locus_tag="VHX39_26335"
     CDS             complement(<1..502)
                     /locus_tag="VHX39_26335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994709.1"
                     /translation="MINSTRRAGARQRIHALFSGRLPFVIVFGCILVVNWGAALWLVD
                     HTYRERATAAYQMVTAEAQYSQQKIQDLFKDADRTLLELRARYSAGHTDLGLRHWNPT
                     VKSGGIALIAPDGQVVAETPEANIAGWPGLMTRLQASPDVLVIGEPIPGKNGHLGFVP
                     VARRMVA"
     gene            1210..>3003
                     /locus_tag="VHX39_26340"
     CDS             1210..>3003
                     /locus_tag="VHX39_26340"
                     /inference="COORDINATES: protein motif:HMM:NF022853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
                     /protein_id="HEX3994710.1"
                     /translation="MIRLITLLSLACLLSVPALGFESAPVSTKRTVATLITDSDSVVP
                     GGRVRVALRLRLADGWHTYWHNPGEAGVPTEIDAALSPGASVGPIDWPSPGRITEGPV
                     TTYGFSGEVILPFSVTLGPGIGAVSGKVTAHWLVCKDICIPEEASFPLDLEAGTGAPS
                     AQMPLFKAHELTVPHASPWDATIAADGTLFVRGRELRPDTVIDAWFIPDTTGQIVDGA
                     AQLLKVRNGGFTLGLRLASGFVPAAGLHGILSVRDRGGSQADVVLTAPEGTAPAPAVP
                     LARALLFAFLGGLILNLMPCVFPILAMKAVGFASGLARGKAGAHAVSYTAGVVGAFIC
                     VAVALLTARSAGLAAGWGFQFASPVFVAAMAWLLFGVGLNLSGVFRIGGSFTGAGSSL
                     AAQEGHWGSFFTGALAVLVATPCTAPFMAVAIASGLAAPPPVTLLIFSTMGLGLAAPY
                     LALSAIPALARRIPRPGRWMEVFRQLLAFPMYGAAVWLLWVVSEEAGSAGVLGTATGF
                     ALLGFAGWCLGVTQDLGSRRRFGWAGSGLAVALVLTTLSGIGAIPAVPAQKQDSEAFT
                     PARLAALRAEGRPVFVNLTAAWCVTCLVNERV"
BASE COUNT          501 a          905 c          981 g          616 t
ORIGIN      
        1 gtgcgaccat ccgccgagcc accggaacga aaccaaggtg gccatttttg ccggggatcg
       61 gctcaccgat cacgagcaca tcgggcgagg cttgcaaccg cgtcatcaag cccggccatc
      121 cggcaatgtt tgcctcgggc gtttctgcaa cgacctggcc gtcgggcgcg atcagcgcga
      181 ttccgcccga cttcacggtc ggattccagt gcctcaggcc gagatcagtg tgaccggcag
      241 agtaacgggc gcgtaattcc aaaagtgtcc ggtcagcgtc cttgaaaagg tcctggattt
      301 tttgttgaga atactgtgcc tccgcggtca ccatttggta cgcagcggtc gctcgttccc
      361 ggtaagtatg atcgaccaac cacagcgcgg cgccccagtt cacgacaagt atgcagccaa
      421 atacgatcac gaatggaagc cggccggaga acaaggcatg gatccgctgc ctggcgcccg
      481 ctcggcgcgt agaattgatc atgccagctg cctcaactat tcgatcccgg cgaaagcaga
      541 taattggcct ggcggaaata acgctgtggt ttcacgtcat gagaccctgt cccaccgatg
      601 atcccggtgt ccgtcggagc cgggagcggg tggaccggca caatacgcgg tgttttcaat
      661 ggctgttgct tataaaggtc gccagccaat cgggctgcga tggcggtcat aacagttacc
      721 gccagaacga ccttcccccg tcggcatgaa cgcggcgacg cggatcgcgt tggttccggg
      781 cacgaaagac gtcgaaactg ccactaaaac cgcaagaaat ccaccatgat cacttgaaat
      841 tcatctcgat cacttggcgt agatgtccgg cgccaaggca aatgcaaggc cgcgccagtc
      901 aaactgaccg acctggtttc tgcagcgatt ttcgtgggca atggtgtgat accgcaacag
      961 cgccgtccga tcgtcctggg gcggttccca ctgcgaggtg ctcggccaac aatgcgcacc
     1021 gcagtttgcg caccaccgcc tggtccagac cgacacattc atctcgaaac ggccggcatc
     1081 tcgaagggac cgggcatctc gaaatggctg gaacgcgaat tcaaatgctg gcagtgccct
     1141 gtcccggtcc tatctgctat gaagccgcgg tttctcgaac ccgccagccg gagataagca
     1201 cgacacgcca tgatccgttt aatcaccttg ctgtcgctcg cctgtctgct gagcgttccg
     1261 gcccttgggt tcgagagtgc gccagtcagc accaaacgaa ccgtcgcgac gctgatcacc
     1321 gacagcgaca gcgttgttcc aggcggccgg gtcagggtcg ctttgcggct gcggctcgct
     1381 gatggatggc acacctactg gcataacccc ggtgaggcgg gcgtgcccac ggaaatcgac
     1441 gccgcgttgt ctccaggtgc gagcgtcggg ccgatcgact ggccctcacc tggccggatc
     1501 accgaagggc cagtaaccac ctacggcttc tcgggcgagg tcatcctgcc tttcagcgtg
     1561 acgttaggcc ctggcattgg cgccgtttcc gggaaggtga cggcacactg gttggtttgc
     1621 aaagacattt gtattccgga agaagcctcg tttccactcg acctggaggc tgggacgggc
     1681 gccccgtcgg cccaaatgcc gttattcaag gcgcacgagc tgacggtgcc tcacgcttcg
     1741 ccctgggatg cgacgattgc cgctgacggg acgctattcg tacgcgggcg ggagttgcgc
     1801 ccggacaccg tcatcgacgc gtggttcatc ccggacacaa ccgggcagat cgtcgacgga
     1861 gccgctcagt tgcttaaagt tcgcaacggc ggcttcacac tcgggctgcg gctcgcgagc
     1921 ggcttcgttc cggcggcagg attgcacggt attctgtcag tgcgcgatcg cggtgggtcg
     1981 caggccgacg ttgtgttgac ggcgccggag ggcacggcgc ctgcaccggc ggtgccgctg
     2041 gcacgggctc tgctgttcgc gtttttgggt gggctcattc tgaacctgat gccgtgcgtg
     2101 tttcccattc tggcgatgaa ggcggtcggg tttgcttccg ggctggcgcg cggcaaggcc
     2161 ggagcgcatg cggtgtccta cacagccggc gtggtgggcg cgttcatttg cgtggcggtc
     2221 gcattgctga cggcgcgctc ggccggcctg gcggcgggtt ggggatttca gtttgcctcc
     2281 ccggtatttg ttgccgccat ggcatggttg ctgttcggcg tcgggctgaa tttgtccggc
     2341 gtgttccgga tcggtggcag cttcacgggt gccggcagca gtctggcggc ccaggagggg
     2401 cattggggca gtttcttcac aggggccctg gccgtactgg tcgcgacgcc ttgcacggcg
     2461 ccgttcatgg cagtcgcgat cgcatccggt ctggctgctc ctccaccggt aacgttgctg
     2521 attttctcca cgatgggact cggattggct gcgccctacc tggcattgag cgcaattccc
     2581 gctctggcca gacgaatccc ccgccctggg cggtggatgg aggtgttccg tcagttgctg
     2641 gcgtttccga tgtacggagc ggcggtgtgg ctgctctggg tcgtcagtga ggaggccggg
     2701 tccgcgggtg tcctgggaac cgccaccgga ttcgctttac tgggatttgc cggttggtgc
     2761 ctcggagtga cgcaggatct cggctcacgc cgccgattcg ggtgggccgg gtccgggctc
     2821 gccgttgccc tggtgttgac gacgctgagc gggatcggag cgattccggc cgtgccagcc
     2881 cagaaacagg acagtgaggc gtttacgccg gcccgtcttg cggccttgag ggccgagggt
     2941 cggccggttt ttgtcaatct gacggccgcc tggtgtgtca catgccttgt gaatgaacgt
     3001 gtg
//
LOCUS       DATAVD010001376         9955 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2738027, whole genome shotgun sequence.
ACCESSION   DATAVD010001376 DATAVD010000000
VERSION     DATAVD010001376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9955
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2738027"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..367)
                     /locus_tag="VHX39_26345"
     CDS             complement(<1..367)
                     /locus_tag="VHX39_26345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug ABC transporter ATP-binding protein"
                     /protein_id="HEX3994711.1"
                     /translation="MLRRFEGLLDPTGPEPNAPPTAGLVRFYWHYIRQARWLAVWLYL
                     VGGLIAILDTTIPTFIGKVVGLVSTYAPDRFLAECWPQLLFMGIVLGVVRPLGGLAHT
                     IVTNQIINPSFTNLIRWQNH"
     gene            complement(399..3893)
                     /gene="smc"
                     /locus_tag="VHX39_26350"
     CDS             complement(399..3893)
                     /gene="smc"
                     /locus_tag="VHX39_26350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HEX3994712.1"
                     /translation="MPVSFSKLRITGFKSFAEPTGVDILPGLTGIVGPNGCGKSNIVE
                     ALRWAMGESSARGLRGGEMEDVIFAGTAGRPSRNIAEVVVTLNDTHGVAPPPFHEHAE
                     LEIQRRIERGAGSDYRINGKEARARDVQTLFADLASGARASAMVSQGRVGALVAARPE
                     ERRAVLEEAAGITGLHARRHEAELKLRAAETNLARAEDLRGQLETQLGSLKRQARQAS
                     RYRNISGAIRTAEAELLSILRAKVDADRAAADSAVRDAEWSVAEATNLVSATQAAATE
                     TAEALSPLRESESETRTTLERHRVAREHIAAEENRARGALSAARGRLAQLRTDLDHAE
                     QIRTDAMAAEARLVSEDTVLAEADAAWPDKAGAAESEAIAGADCARVADRDANSATEA
                     AAEANAQAQSALQAMNQAEQRVRRLMDQLMGLRDERERFAGQQIDVATLEQSAAEYAD
                     AQAALTEARAAVEAAEQEHAAAASALATAREDWSRAEGARAKLAAEIQALAEVLAVRD
                     GERWPPMIDSLSAPSGLETALGAALGEELTSALDPEADRHWRELPPLASAPSLPAAAP
                     SLLGMVEAPAALARSLSQIALVEDERVALDCQADLAPGQMLVSREGAIWRWDGYTIRA
                     GTPTAAAVRLRQRNRLSVLREALTDAEQVSERANAAQTEAEQLARTAALSEQLARSTR
                     RDAEAGFERATAALTSLRSQATTAAARLAAADEQLARLEQEHQEAFAALEVARAAYAA
                     RPDVDGLREAVERSRVALAEARSRESAALSARNSLAREHAICVDRRSAIASERTLWTD
                     RAREADARVADLLSRLDVAQAEMTALETAPNEAAARQAEAQEALRLAEMLHQQAAQAL
                     SEATAAAGEAERAARAAEAALSSRREAAVRAEGLAEQANHAWGALAERILERLGANPT
                     LPDPPDDLTTEIEDKARRRHERLVKERDEMGPVNLRAETEAEAIEQQIATIDSERAEL
                     LTAIARLRGSIGALNREGRERLNEVFQAIDRHFQQLFTRMFGGGRAHLALVGSDDPLL
                     AGLEIYAQPPGKKLAALSLLSGGEQALTALSLIFAVFRCNPAPICVLDEVDAPLDDAN
                     VERFCMLLEDIERETKTRFLVVTHHPMTMARMNRLYGVTMQERGVSRLLSVDLARAAA
                     MVEQRQLPLEDQTRLAAD"
     gene            complement(3915..4460)
                     /locus_tag="VHX39_26355"
     CDS             complement(3915..4460)
                     /locus_tag="VHX39_26355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEX3994713.1"
                     /translation="MPGIARADDLTRAERSVGQPDAKYTVNEYFSLTCSHCAAFAAET
                     MPKVKSDFIATGKVRWVFHDYPLDQIALLAAQVARYLPVDRYEPFVEALFATQDRWAF
                     ARDANHTEELWKTAGLAGMSRPTFDKAVADDSLRDWIVQQRQIATDKWQVDSTPSFVI
                     NGTKYAGEMSFDAFRKIVPDT"
     gene            complement(4534..5064)
                     /locus_tag="VHX39_26360"
     CDS             complement(4534..5064)
                     /locus_tag="VHX39_26360"
                     /inference="COORDINATES: protein motif:HMM:NF017103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HEX3994714.1"
                     /translation="MPKERISDDNTHPGMTKLLRAVHGPRQIAAVVPVVTRNAFKRGA
                     PGVAQLLEAWSGIVGPALAEVTMPRRLGQGTLTIGCAGPVAMELQHLSNEVLGRINQY
                     LGSHSVLRLRFVQIAAARAPVQQRPKPTAAIAAAASESVAHLAEGPLRTALAGLGRAV
                     LTESASRLRQQPHTKR"
     gene            5063..6097
                     /gene="mutY"
                     /locus_tag="VHX39_26365"
     CDS             5063..6097
                     /gene="mutY"
                     /locus_tag="VHX39_26365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEX3994715.1"
                     /translation="MFPARALLAWYDRHRRRLPWRAETGDTANPYRVWLSEIMLQQTT
                     VAAVIPYYETFVSRFPTLQALAAAELDDVLSLWAGLGYYARARNLHACAREVAARGSF
                     PSDVAGLMQLPGIGAYTAAAVASIGFNVPTVPIDGNVERVTARLFALTEPLPGVKRAI
                     RAAADQLGLDPDAIARPADFTQALFDLGASICTPTSPGCAVCPWMQTCGARRLGIAAD
                     LPRRAPKKQRPLRHGVHFWLADSAGNVLLRRRPTSGLLGGMVELPGTAWREGIWPSSE
                     AMTHAPMAADWQPVGQVQHGFTHFQLTIDLFAARVATIAGDGFIHSQERLSEVALPSV
                     MRKCVLAARS"
     gene            complement(6194..7837)
                     /locus_tag="VHX39_26370"
     CDS             complement(6194..7837)
                     /locus_tag="VHX39_26370"
                     /inference="COORDINATES: protein motif:HMM:NF004807.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HEX3994716.1"
                     /translation="MEETGHMKVGDAIAEIMKREGIEILCGYPVNHLLEYAAKADIRP
                     VIVRQERIGLHMADAISRVTSGKKIGAFCMQHGPGAENAYGGVAQSYSESVPLLVLPQ
                     GYARRIAYIDPNFSSARRMADVSKFAEPVIVPAELCNIMRRAFSNLRNGRSGPAIVEI
                     PTDIWNEEIGDIDYQPVGVHKYGPDMADVRKAAAAILAAKRPVIYAGTGVQWAEAWPQ
                     LRKFAELIGAPVTTSLGGKSSFPENHPLSLGSGGNAVPKPVHHFVEKSDLIIGIGCSF
                     TETNFGIKFPKGKKFIHATLDPNHLNKDVVSAVGLVGDAGLTLDALIGELSQSIKSNR
                     DTSEVVKEITKVRAEWMADWEPLLHSNEAPLSPYRVIHELMQGVDPKNTIITHDAGSP
                     RDQISPFWVSTEPMSYIGWGKTTQLGMGLGLAMGAKLAKPDKLCINLWGDAAIGFTGM
                     DFETAVRERIPILSILLNNFSMAIELKVMPISTEKYRSTDISGNYADMAKAFGGYGER
                     VTQPDQIQAAIQRGIEQTKAGNPALLEFITAKETRVSKF"
     gene            7970..8860
                     /locus_tag="VHX39_26375"
     CDS             7970..8860
                     /locus_tag="VHX39_26375"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019200 - carbohydrate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HEX3994717.1"
                     /translation="MIIVFGSINLDLIFSVPHIPAIGETVLGPAIRIEPGGKGANQAV
                     AAARDGASVILAAAVGRDTLAASALTWLRKANVDLTRLLETDANTGCAGIAVDPKGNN
                     AIVVGSGANLAVRQTQIEDALLNPTSTVVLQMEVPPTENAALIHRARAKGARVILNLA
                     PAAQFPEATLREVDILVVNETESAWLANRLGCGDGAAEIYARLGTLIVRTLGADGLEM
                     ASAEGVMAMPAHTVTTIDTTAAGDCFVGVLAAALDRGASLAGALNRATAAAALCCTRH
                     GSQGSIPLAYETDAFVTRDL"
     gene            8920..9678
                     /locus_tag="VHX39_26380"
     CDS             8920..9678
                     /locus_tag="VHX39_26380"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX3994718.1"
                     /translation="MNGQQIERAAHILVQARRDMKPLNGLPDGLKPSTIEEAHAIQDA
                     VSHQLGQLIAGFKAMAPANGEPTRGMIYGGTIHASPCKLQASMVPQCGVEGEVAFVFR
                     HDLPPRAKPYTRNEVASVIDACVAIEVVHSRFAQKAPVSNLEKLADSISNGALVHDVP
                     RTDWRELPLGKLKVTLSVNGKKSLEQVGGHATGDPLGIAVVLANLWREKGGVRTGQFV
                     TCGSNTGLKFLKPGDVCSIRFEGLGAAEVTFAKA"
     gene            9767..>9955
                     /locus_tag="VHX39_26385"
     CDS             9767..>9955
                     /locus_tag="VHX39_26385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994719.1"
                     /translation="MEPQHRLTYQASIDRPRLTLPDGKRVAVFLVVNIERWDINRPMP
                     RQVLSAPQGASVTPDLPNW"
BASE COUNT         1782 a         3194 c         3051 g         1928 t
ORIGIN      
        1 aatggttttg ccaccggatt aaattggtga agctgggatt aatgatctgg ttggtgacga
       61 tggtgtgcgc gaggccgcca agaggccgca ccacgccaag cacgatgccc ataaaaagca
      121 actgaggcca gcattccgcc aggaaccgat ccggcgcgta cgtcgatacc agcccaacga
      181 ccttgccgat aaaggtcggg attgtcgtat ccaggatcgc gatcagcccg ccaacgaggt
      241 acagccacac cgccagccaa cgcgcctgcc tgatgtagtg ccaatagaat cgcaccagtc
      301 cggccgtcgg cggcgcattc ggctcggggc cggtggggtc gagcaaacct tcgaagcgac
      361 gcagcatccg tcctgggtga accgagcctg acgggtcgtc aatcggcagc gaggcgggtc
      421 tggtcttcca ggggcaattg ccgctgctcc accatcgccg cagcccgcgc gaggtcgacc
      481 gaaagcagcc gcgacacgcc tcgctcctgc atcgtcaccc cgtaaagccg gttcatgcgc
      541 gccatcgtca tgggatgatg ggtcaccacc aggaaacggg ttttcgtctc gcgctcgata
      601 tcttccagca gcatgcagaa ccgttcgaca ttggcgtcgt cgagtggcgc gtccacctca
      661 tccagcacgc agatcggtgc cgggttgcaa cggaacaccg caaaaatgag cgacaaagct
      721 gtcagcgcct gctccccgcc tgacagcagc gacaatgccg ccagcttctt ccctggcggc
      781 tgcgcgtaga tttccagacc ggccaacaac gggtcgtcgg aaccgaccag cgccagatgc
      841 gcccgtcctc cgccaaacat gcgcgtgaac aactgctgga aatgccggtc gatcgcctgg
      901 aaaacctcat tgaggcgctc ccgcccctca cgattcaggg cgccgatcga tccacgcaat
      961 ctggcgatgg ccgtgagcag ttccgcgcgc tcgctgtcga tggtggcgat ctgctgttcg
     1021 atcgcctccg cctctgtctc ggcacgaaga ttgaccggcc ccatttcgtc gcgttctttg
     1081 acaaggcgct catgccgcct gcgggcctta tcttcgattt ccgtcgtgag gtcgtcaggc
     1141 gggtccggca atgttggatt ggctccgagg cgttccagga tacgctcggc caaagcgccc
     1201 cacgcatggt tcgcctgttc ggccaaccct tcggcacgaa cggcagcttc tcgacggctc
     1261 gaaagcgctg cctccgctgc gcgtgccgca cgctccgctt ctccggccgc ggcggtcgcc
     1321 tcgcttaaag cctgagccgc ctgctggtgc agcatttccg ccagccgtag cgcttcctga
     1381 gcctccgcct gtcgcgcagc ggcctcattc ggcgcggtct ccagcgcggt catttcagcc
     1441 tgcgcgacgt ccagccgact tagcaggtcc gcgacccgcg cgtcggcttc tcgggcacgg
     1501 tcggtccata gggttcgctc agatgcgatt gcggaacgtc gatccacaca aattgcatgc
     1561 tcgcgggcaa gtgaattgcg ggcggacagc gctgccgatt ctcgcgaccg cgcctcagcc
     1621 aatgcaacac gggagcgttc gactgcttca cgcaagccat cgacgtccgg cctggccgca
     1681 tatgccgctc gggccacttc cagggcggca aaagcttcct ggtgctcctg ttccaaccgt
     1741 gccagttgct cgtccgcggc cgccaggcgt gccgctgccg tggtcgcctg actgcgcaac
     1801 gaagtgagtg cggcggtcgc ccgttcgaaa ccggcttccg cgtcccgccg ggtcgaccgc
     1861 gccagttgct cgctcaaggc agccgttcgt gccagttgtt cggcttcggt ctgcgccgca
     1921 ttggcacgtt cggatacttg ctcggcgtcc gtgagcgctt ccctcaaaac gctcaatcgg
     1981 ttgcgttgac gcagccgcac ggccgccgca gtcggggttc ccgccctgat cgtgtagcca
     2041 tcccagcgcc agatcgcgcc ttcgcgggac accagcatct ggccaggagc caaatcggcc
     2101 tgacaatcga gtgcgacccg ctcatcctca accaaagcaa tttgcgacag cgatcgagcg
     2161 agggccgccg gtgcctcaac cattccaagc aatgatggcg cagccgccgg cagcgatggc
     2221 gcggaggcca acggcggcag ttcccgccag tgccgatcgg cctcgggatc gagcgccgag
     2281 gtcaattcct cccccagcgc cgcaccaagg gctgtttcca gccctgacgg tgcgctcagc
     2341 gagtcgatca tcggcggcca ccgttcaccg tccctgaccg ccaggacctc ggccagtgcc
     2401 tggatttcgg ctgccagttt cgcgcgtgcc ccttccgccc ggctccaatc ctcgcgcgcc
     2461 gttgccagag ccgaggcggc ggcagcatgc tcctgttctg cggcctctac tgcggcccgc
     2521 gcttcagtca gggcagcctg cgcatcagca tattcagccg cagattgctc cagcgtcgcg
     2581 acgtcgatct gctgaccagc aaagcgctcg cgctcatccc gcagacccat gagttggtcc
     2641 atcaggcgcc gaacccgctg ttcggcctgg ttcatcgcct gtagcgcact ctgagcctgg
     2701 gcattcgcct ctgccgcagc ctcggtggca ctattcgcat cgcgatcggc gacacgtgca
     2761 caatcggcgc cggcgattgc ttcggattcc gcggcgcctg ctttgtccgg ccaggcagca
     2821 tcggcttcag ccaaaaccgt atcttcggac acgagcctcg cttcggcagc catggcgtca
     2881 gtgcggattt gttcggcatg gtccagatca gtgcgcaatt gcgccagacg gccacgggcc
     2941 gcgcttaagg caccccgggc gcggttttct tccgccgcga tatgttcccg cgcaacgcgg
     3001 tggcgttcca gagtggtccg agtttccgac tcggattctc gcagcggcga caatgcctcg
     3061 gctgtttctg ttgcggccgc ctgcgttgcc gagaccagat ttgtcgcctc ggcgacggac
     3121 cattccgcat cgcgcacggc actgtccgcc gcagctcgat ctgcatcgac tttggctcgc
     3181 aagatggaca gcaattctgc ctcggcagtg cgaatcgctc cggaaatatt gcgatatcgg
     3241 ctggcctggc gcgcctgccg tttcaatgac ccgagctggg tttccaattg accacgcagg
     3301 tcctcggcgc gtgccagatt ggtttcagcc gcacgcaact tcaattcggc ttcgtgccgt
     3361 cgcgcatgca gaccggtaat ccccgccgcc tcttccagca ccgcgcgccg ttcctcgggc
     3421 ctggccgcaa ccaaagcacc aacgcgcccc tgactgacca tcgccgaggc acgtgcaccc
     3481 gatgccagat cggcgaacag ggtttgcaca tccctcgccc gcgcttcttt cccgttgatg
     3541 cgatagtcgg agccggcacc acgctcgatc cgccgctgaa tttcgagttc ggcatgctca
     3601 tggaatggcg gaggcgcgac accatgcgtg tcgtttagcg tgaccacgac ctctgcaatg
     3661 ttgcgcgaag gccggcccgc ggtacccgcg aagatcacgt cttccatttc gccgccgcgt
     3721 aggccacgcg cactgctttc gcccatggcc caacgcaaag cttcaacgat gttggattta
     3781 ccacagccgt tcggaccaac gattccggtc agtccgggaa ggatgtctac gccggtcggc
     3841 tctgcgaagc tcttaaatcc cgtgatgcga agtttactga aactgaccgg caaacagccc
     3901 tcctgcttaa gtcactatgt gtccggcacg attttgcgga acgcgtcaaa gctcatttcg
     3961 cccgcgtatt tcgtcccgtt gatcacaaag ctcggagtcg agtcgacctg ccatttatcc
     4021 gtggcgattt gccgctgctg tacgatccag tctctcaggc tgtcgtcggc aaccgctttg
     4081 tcgaaggtgg gacggctcat tccggcaagc ccggcggttt tccacagctc ctcggtatga
     4141 ttggcgtctc gggcaaaagc ccagcggtcc tgggtcgcaa agagcgcctc cacgaagggt
     4201 tcgtagcggt cgaccggcaa atagcgggca acttgggccg ccaacagcgc gatctgatcc
     4261 aacgggtaat cgtgaaagac ccaccggacc ttgccggtcg caatgaaatc ggatttcact
     4321 ttaggcatcg tctcagccgc gaaagcggca caatgcgaac aagtgagcga gaaatactcg
     4381 ttgactgtgt atttcgcatc cggctggcca acagagcgtt cggccctggt taaatcgtcg
     4441 gcgcgcgcga tgcccggcaa cccaatgcct tgagccaacg tcgcacccgc gacagctgcc
     4501 aggaagtttc ggcgacgtat aagcatgctg acctcagcgt tttgtatggg gttgctgtcg
     4561 gagtcgggaa gcggattcgg ttaaaactgc gcggcccagt ccggccagtg cggtccggag
     4621 tggtccctca gccaaatggg ccaccgattc ggaggcggcg gccgcaatcg ctgcggtagg
     4681 tttcggcctc tgttggaccg gggcacgtgc ggccgcgatt tgcacgaagc gcaaacgcag
     4741 cacggaatgt gacccgagat actgattgat gcggccgagc acctcgttgg acaaatgctg
     4801 cagttccatc gccaccggcc cggcgcagcc gattgtcagg gtgccctggc ccagacggcg
     4861 cggcatggtg acctcggcga gagccggtcc aacgattccc gaccatgctt ccaaaagttg
     4921 ggccacaccg ggcgccccgc gtttgaacgc gttgcgggtg accaccggga cgacggccgc
     4981 tatctgccga ggcccatgga cggcgcgtaa gagcttcgtc atacccgggt gcgtgttgtc
     5041 gtcagatatc cgttccttgg gcatctttcc cgctcgcgcg ttgttggcgt ggtatgaccg
     5101 ccatcgtcgc cgcctgccct ggcgcgctga aaccggggat acggcaaatc cgtaccgcgt
     5161 ctggctcagc gagatcatgt tgcagcagac gacagtcgcg gccgtcatac cttactatga
     5221 aaccttcgta agccgatttc ccacgttgca ggcgctcgcc gccgccgaac tggatgacgt
     5281 cctgagccta tgggccggtc tgggatacta tgcgagggcc cgaaatctcc acgcctgtgc
     5341 cagagaggtc gcagcgcgcg gcagttttcc gagcgatgtc gcgggtttaa tgcagctgcc
     5401 tggaatcggc gcatacacgg ctgctgccgt ggcgtcgatc ggtttcaacg tgccgaccgt
     5461 gccaatcgat ggcaacgtcg agcgggtgac cgcgcgcctt ttcgcactga cggagccgct
     5521 gcctggcgtc aaacgcgcga tacgcgccgc cgccgaccag cttggcctgg acccggacgc
     5581 aattgcccgg cctgctgatt tcacccaggc actgttcgac ctgggtgcat cgatttgcac
     5641 gccgacgtcg ccgggttgtg cggtttgccc ttggatgcag acatgcgggg ccaggcggct
     5701 cggcattgcg gctgacttgc cacggcgtgc gccaaagaag cagcgtccgc tgcgacacgg
     5761 ggtgcatttc tggctggccg attcggctgg gaatgtcctg ctgcggcggc gtccgacatc
     5821 cgggctgctc ggcgggatgg tcgaattgcc cggtaccgca tggcgggaag gaatctggcc
     5881 atcgtcagag gcgatgacgc acgctcccat ggcggctgac tggcagccgg tcggtcaggt
     5941 gcaacacgga tttacccatt ttcagctgac cattgacctg tttgccgctc gggttgccac
     6001 gatcgccggt gatggtttca tccactccca ggagcggctg agtgaagtcg cacttccgtc
     6061 ggtgatgcgg aaatgcgtac tggcggcgag gtcatgaggt tggccggccg gccgaaacaa
     6121 gatcattctc gttcgctctg ccggcatcga ttgtggttcc ctctccccgc accggggaga
     6181 gggagcgtca ggatcagaac ttggaaacgc gggtttcctt cgcagtaatg aattccagca
     6241 gcgcgggatt gccggctttg gtctgctcga taccgcgttg aattgccgcc tggatctgat
     6301 cgggctgggt cacgcgctca ccataaccgc cgaacgcctt cgccatgtcg gcgtagttac
     6361 cggaaatgtc ggtcgaacgg tacttctcgg tcgagatcgg catcaccttg agctcgatcg
     6421 ccatcgagaa gttgttcaac aggatcgaca ggatcggaat ccgctcgcgc accgccgtct
     6481 cgaagtccat gccggtgaag ccgatcgcag catcgcccca gaggttgatg cagagcttgt
     6541 ccggcttcgc caacttggcg cccatggcga ggccgaggcc catgccaagc tgcgtggtct
     6601 tgccccagcc gatatacgac atcggttcgg tcgagaccca gaacggcgag atctgatcgc
     6661 gcggactgcc ggcgtcgtgg gtgatgatgg tgttcttcgg atccacgccc tgcatcagtt
     6721 catgaatgac ccgatagggg ctgagcggcg cctcgttgga gtgcagcaga ggctcccagt
     6781 ccgccatcca ctcggcgcgc accttggtga tttctttcac tacttcgctg gtgtcacgat
     6841 tgcttttgat gctctggctc agttcgccga tcagcgcatc caatgtaaga ccggcatcgc
     6901 cgaccagccc gaccgcactg acaacatcct tgttcagatg gttgggatcg agcgtcgcgt
     6961 gaatgaactt cttgcccttg ggaaacttga tgccgaagtt tgtttcggtg aacgagcaac
     7021 cgatgccgat gataaggtcg gacttctcga cgaagtgatg caccggcttc ggcaccgcgt
     7081 tgccgccgga gccaagcgac agcggatgat tttccgggaa cgaactcttg ccgccaaggc
     7141 tggtggtgac cggggcgcca ataagttcgg caaatttgcg caattgtggc cacgcctcgg
     7201 cccattgcac accggtcccg gcatagatca caggccgttt cgcagccagg attgcggcgg
     7261 cggctttgcg cacgtcagcc atatcgggac cgtatttgtg tacgcccact ggttggtagt
     7321 cgatgtcgcc gatttcttcg ttccagatgt cggtcgggat ctcgacgatc gctgggccgg
     7381 agcggccatt gcgcagattg ctgaacgccc ggcgcatgat gttgcacagc tcggccggaa
     7441 caatcaccgg ctcggcgaac ttggagacgt ctgccatccg ccgggcagaa ctgaagttcg
     7501 gatcaatata ggcgatgcga cgcgcatagc cctgaggcag caccagcaac ggcactgatt
     7561 ccgaataaga ttgggctacg ccgccatagg cgttctccgc cccgggaccg tgctgcatgc
     7621 agaaggcgcc gatttttttg ccggatgtga cgcgtgagat cgcgtcggcc atgtgcaggc
     7681 caatccgctc ctgccgcacg ataaccggcc tgatgtcggc cttcgccgca tattccagca
     7741 gatggttgac cggatagccg cagaggatct cgatcccctc ccgcttcatg atttcagcga
     7801 ttgcgtctcc gactttcata tgaccggtct cctccatctg ggttgccaag cgaattccct
     7861 gacagggtag aagccggact gcgcactggc aaccggcacc cagggtcgcc cagattcggt
     7921 gacccgtcgc atgctttggc ggatgcgcgt tctactgata catggcccta tgatcattgt
     7981 tttcggatcg attaatctcg acctgatctt ctcggtgccg catatcccgg ccattggtga
     8041 aactgttctt ggtcctgcca tccgcatcga gccgggtggc aagggcgcca atcaggctgt
     8101 cgccgcagca cgcgacggcg ccagcgtcat cctggcggcc gcagtggggc gcgacaccct
     8161 ggccgccagc gcgctgacct ggttgcgcaa agcgaatgtc gatcttacgc ggttgcttga
     8221 aactgacgcc aacaccgggt gtgccggcat cgccgtcgat ccgaagggca acaacgccat
     8281 cgttgttggt tcgggtgcca atctggccgt gcgccaaacc cagatcgaag atgcgctgtt
     8341 gaacccaaca tccaccgtgg tgctgcaaat ggaagttccg ccgacagaga acgcggcgct
     8401 cattcaccgc gcacgggcga aaggtgcgcg tgtcattctc aatcttgccc cggccgcgca
     8461 gtttcctgaa gcgacattgc gagaggttga cattctggtg gtgaacgaaa cggagagcgc
     8521 atggctcgcc aaccggctcg gatgcggcga tggcgcagcc gaaatctacg cccgtctcgg
     8581 taccctgatc gttcgaacgt tgggcgccga cgggttggag atggcaagtg ccgaaggtgt
     8641 aatggcgatg ccggcccata cggttaccac aatcgacaca accgcggcag gagattgttt
     8701 cgttggtgtt ttggccgcgg cgttggatcg cggtgccagc ctggccggtg ccctcaatcg
     8761 agcgacggcg gcggcggcgt tatgctgcac ccgacatgga agccagggca gcataccgtt
     8821 agcctacgaa acggatgcgt ttgtcacgcg cgacctgtga caaatccggc caggcgtggc
     8881 accctcgacg ccgcagcaat aaagggggaa tcacattcca tgaacggcca acagatcgag
     8941 cgcgcggctc atatcctggt gcaggcccgg cgcgacatga aaccgttgaa cggtctgcct
     9001 gacgggctca aaccatcgac gatcgaggaa gcgcacgcga tccaggacgc agtcagtcac
     9061 caacttggcc aactgatcgc cggcttcaag gcgatggcgc ccgccaacgg cgagccaacg
     9121 cggggaatga tttatggcgg caccatccat gcgtcgccgt gcaaactcca ggcctcgatg
     9181 gtgccgcaat gcggggtcga gggcgaggtc gcgtttgtct tccgccacga cctgccgccg
     9241 cgcgccaaac cttacacgcg gaatgaggtt gcctccgtga tcgacgcctg cgtcgcgatc
     9301 gaggtcgtgc acagtcggtt tgcacagaag gcgccggtgt cgaatctgga gaaactggct
     9361 gactcgatca gcaacggcgc gctggttcac gatgtgccca ggaccgattg gcgcgaactg
     9421 ccattgggca aactgaaagt cactctgagt gtgaatggca agaagagtct cgagcaggtg
     9481 ggtggccacg cgaccggcga tcctttgggg attgccgtcg ttctcgccaa cctgtggcgc
     9541 gaaaagggcg gcgtccgcac cggacagttc gttacctgcg ggtcgaatac cggcctgaag
     9601 tttctgaagc ccggcgatgt ctgctcgatc cgcttcgagg gcctcggcgc ggccgaggtg
     9661 acgttcgcca aagcgtgagt tttgcgctca agcgggaatc ctgacgcgac cggaccgatc
     9721 tggtcgagcc cttgagcagc cgaggtccca agggcaaggt ggagcaatgg agccacaaca
     9781 tcgcctcacc tatcaggcca gcatcgaccg gccgcgcctg acgctgccgg acggcaagcg
     9841 ggtcgccgtt ttcctggtcg tgaacatcga gcgatgggac atcaaccggc ccatgcctcg
     9901 tcaggtgctg agcgcgccgc agggtgcctc ggtcaccccc gacctgccca actgg
//
LOCUS       DATAVD010001377         2334 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3107560, whole genome shotgun sequence.
ACCESSION   DATAVD010001377 DATAVD010000000
VERSION     DATAVD010001377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3107560"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..307
                     /locus_tag="VHX39_26390"
     CDS             <1..307
                     /locus_tag="VHX39_26390"
                     /inference="COORDINATES: protein motif:HMM:NF018178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HEX3994720.1"
                     /translation="EVQVNNTHTDPKRTAGLYDIMDTYEAPSPDDVWFTLYIKVEGKH
                     VITKVNDKVIVDYTEPEGYQPKPNHPGRKIDHGTFALQGHDPKSETHFKNIFVRPLP"
     gene            complement(646..2052)
                     /locus_tag="VHX39_26395"
     CDS             complement(646..2052)
                     /locus_tag="VHX39_26395"
                     /inference="COORDINATES: protein motif:HMM:NF019040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1501 domain-containing protein"
                     /protein_id="HEX3994721.1"
                     /translation="MHFSDHSCNRITPLFTRRDVLRNFSCGFGWLAFASLAHQASATT
                     TASAPESPLAPKKPNFPARAKRVIFLTMRGGPSHVDTFDYKPQLTADTGKPGKRPGTQ
                     LLGSKWKFTQNGRSGLWISEAFPNVAKHADEMCLVRSMQTDLPSHPQAFLKMHTGSFQ
                     FVRPSLGAWTLYGLGTENQNLPGFITLTPPSAFGGAQNYGSAFLPAIYQAQRIGQENR
                     PIAGAEVRNLETSLSTQAQRNELSLVQSMNQEKLARDHFNPEVEGVIQSYELAFKMQS
                     QMPQVMDLSKETPATQQLYGIGDPATDDFGRKCLLARRCIEAGVRFVEITHGNWDHHF
                     NLSTALTSNAKAVDAPIAGLLTDLRLRGLLKDTLVVWAGEFGRTPHAQGGDGRDHNNK
                     AFTVWMAGGGVKPGTSYGQTDEYGYEAVENKVQINDLHATILALLGLDHEKLTFNYAG
                     RDFRLTNVGGNAVKEIMA"
     gene            complement(2098..>2334)
                     /locus_tag="VHX39_26400"
     CDS             complement(2098..>2334)
                     /locus_tag="VHX39_26400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994722.1"
                     /translation="GLGANLQERITYAYWLVFSRPPDNVERTAATNFFSRFPASWAKG
                     QSGSAGVRDAGAAKAAWTSFCRALFASAEFRYVN"
BASE COUNT          431 a          708 c          746 g          449 t
ORIGIN      
        1 cgaagtccag gtgaacaaca cccacaccga tcccaagcgg accgccgggc tctatgacat
       61 catggatacc tacgaggctc catcaccgga cgacgtctgg ttcacgctct acatcaaggt
      121 cgaaggcaag cacgtcatca ccaaggtgaa cgacaaggtg atcgtcgatt acaccgaacc
      181 ggaaggctac cagccgaagc cgaatcatcc tggccggaag atcgaccacg gcaccttcgc
      241 cctccagggc cacgacccga agagcgagac gcatttcaag aatatcttcg ttcggccgct
      301 gccgtaagca gcgagccagc acgccggcta gtcctgtgcg ttgtgtagag gggagcgccg
      361 aaggcaccca aaaaaacggt catcctgagc ctgcgaagga actcagattt cgctcttcct
      421 cagacgccca catttcggat ttacctccta aataatgccc tcgccccgcg gcaaagcggg
      481 tgaagaaatg cagagatcag aggtccttcg caagctcagg atgactggtt ttttccgggt
      541 gcctccggcg cgtccatttc gcctctttcg cggtcccctc ctcaggactc cagccgacaa
      601 atcaccccgc ccagcggtta aaaaccgccg ctccttggtg tcacctcacg ccatgatttc
      661 tttcactgcg ttgccgccca cattcgtcag gcggaagtcg cggccggcgt agttgaaggt
      721 gagcttctcg tggtcgaggc cgaggagggc gaggatcgtg gcgtggaggt cgttgatctg
      781 gaccttgttt tccaccgctt cgtagccgta ctcgtcggtc tggccgtagc tcgtgccggg
      841 tttcacgccg ccgccagcca tccatacggt gaaggccttg ttattgtggt cgcggccgtc
      901 gccgccctgg gcatgcgggg tgcggccgaa ttcgccggcc cagacgacca gcgtgtcttt
      961 gagcagcccg cgcaaccgca ggtcggttag caagccggca atcggcgcat cgaccgcttt
     1021 ggcgttgctg gtcagggccg tcgacagatt gaaatggtgg tcccagttgc cgtgggtgat
     1081 ttccacaaaa cgcacgccgg cctcgatgca gcggcgcgcg agcaggcact tgcggccgaa
     1141 atcatcggtc gccgggtcgc caatcccata gagctgttgc gtcgcgggtg tttcctttga
     1201 aaggtccatg acctgcggca tctggctctg catcttgaac gcgagttcgt aagactggat
     1261 cacgccctcg acctcggggt tgaaatgatc gcgcgccagc ttctcctggt tcatgctctg
     1321 gacgagggag agctcattgc gttgcgcctg tgtgctgagc gaggtctcga gattgcgcac
     1381 ttccgcaccg gcgatgggcc ggttctcctg gccgatgcgc tgggcttggt aaatcgccgg
     1441 caggaatgcg ctaccgtaat tctgcgcgcc gccaaaggcg ctcggcggcg tgagggtgat
     1501 gaagccgggc aaattctggt tctccgtgcc cagaccgtag agtgtccagg ccccgagcga
     1561 gggccgcacg aactggaagc tgccggtgtg catcttcagg aaggcctgcg gatggctcgg
     1621 cagatcggtc tgcatgctgc gcaccaggca catctcatcg gcgtgcttgg cgacattggg
     1681 aaaggcctcg gagatccaca gcccgctgcg cccgttttgg gtgaacttcc attttgagcc
     1741 gagcagttgc gtgccagggc gtttgcccgg cttacccgta tccgcggtca gttgcggctt
     1801 atagtcgaag gtgtccacgt gcgacgggcc gccgcgcatg gtcaggaaaa tgacgcgctt
     1861 ggcccgggcc gggaagttcg gcttcttcgg cgcgagcgga ctctcgggcg cggacgcggt
     1921 ggtcgtggcg gaggcctggt gggcgaggct ggcgaaggcc agccagccaa aaccgcagga
     1981 gaaattgcgc aggacatcac gccgcgtgaa gagcggggtg atccggttgc aggagtgatc
     2041 ggaaaagtgc atggcgttgg gtttggcgat ggtcaggctc gagaaatcag gcgttgttca
     2101 attcacgtaa cggaattccg cgctggcgaa gagcgcgcgg cagaaactgg tccacgcggc
     2161 tttggctgcc ccagcgtcgc gcaccccggc cgaaccgctc tgccctttgg cccaactcgc
     2221 cgggaagcgg ctgaagaaat tcgtcgccgc cgtgcgctcg acattgtccg gcggacgcga
     2281 aaagaccagc cagtaggcgt aggtgatgcg ttcctgcagg ttcgccccga ggcc
//
LOCUS       DATAVD010001378         1859 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2738274, whole genome shotgun sequence.
ACCESSION   DATAVD010001378 DATAVD010000000
VERSION     DATAVD010001378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2738274"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1859
                     /locus_tag="VHX39_26405"
     CDS             <1..>1859
                     /locus_tag="VHX39_26405"
                     /inference="COORDINATES: protein motif:HMM:NF013707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HEX3994723.1"
                     /translation="VESQIRDALYHLPADERPEISGKTTPSGEPLLSPLMELSPESVA
                     SGMTRFLTAAGLNLPDLPAPPMVSRPASLLKRVPAFCAGCPHATSTKLPEGSFASAGI
                     GCHFMALDDGDQTRTFTHMGGEGAPFVGLSSFTDVKHMFANIGDGTYQHSGILAVRQA
                     AAAGTRMTYKLLFNDAVAMTGGQPAEGSPTVPMLAAQIAAEGIKRIAIVADEAERLPP
                     KSALPAGVTTHIRADLDAVQRSLRDYDGPSVLIYDQVCATEKRRRRKRGSMAQAAKHV
                     MINEAVCENCGDCSTQSGCIAIEPVETPLGRKRRINQSACNVDLSCLKGFCPSFVTLP
                     GPPVAPAADTTWQARESEFAAALPQPIVPSPDVWRGLFAGIGGGGIVTAGAILAMAAH
                     LEGRHVKTLDFTGLAQKNGAVVAHVQIATDSDALDVVRIPIGTANLMLAADLAVGCSA
                     GVLERNASDAVVIGNLDLAATAEFKRDSLLSIDALLHRRTIEKVTDAKASVWLHGVLL
                     AERLFGNTQAMNTLLLGLAWQRGLVPVGEAAILRAIELNGAAVALNRRAFLWGRIVAE
                     RPELTDHILGQATAAPLQLPELIEARAAALVDYQSSAYAAQYLSVIREATARE"
BASE COUNT          327 a          581 c          595 g          356 t
ORIGIN      
        1 cgttgaatcg caaattcgtg acgccttgta tcacctgccg gccgacgaac gcccggaaat
       61 cagcggcaaa accacgccga gcggtgagcc tctgttgtca cctttgatgg aactgtcgcc
      121 cgagagcgtt gcctcaggca tgacgcgctt cctgactgca gccggtctga atctgcccga
      181 tttaccggcg ccaccgatgg tttcgcgccc agcttcgttg ctgaaacgcg tgccggcgtt
      241 ttgcgccggt tgcccgcacg cgacatcgac aaaactgccg gaaggaagtt ttgccagtgc
      301 cggcatcggc tgccacttca tggcgctgga cgatggcgac cagacccgga cttttaccca
      361 tatgggcggt gagggcgcgc cgttcgtcgg gttgtcgtcg ttcaccgacg tcaaacacat
      421 gttcgccaat atcggtgacg ggacctacca acattccggc atcctggcgg tccgtcaggc
      481 cgctgccgcc ggcacccgga tgacttacaa attgctgttc aacgatgcgg tggcgatgac
      541 cggcggtcaa ccggccgagg gcagcccgac cgtcccgatg ctcgccgcgc agatcgccgc
      601 cgaaggcatc aaacggatcg ccattgtcgc cgatgaggcc gagcgcctgc cacccaaatc
      661 agccctgccg gctggcgtga cgacgcatat tcgtgccgac ctcgatgccg tgcagcgctc
      721 gctgcgcgat tacgatggcc cctcggtgct catctacgac caggtctgcg ccaccgagaa
      781 acgccgtcgc cgcaagcgtg gcagcatggc acaggcggcg aaacatgtga tgatcaatga
      841 ggctgtgtgc gagaattgcg gcgactgctc gacccaatcc ggttgtatcg caatcgaacc
      901 ggtggaaacc ccgcttggcc gcaaacgccg gatcaatcaa agcgcctgta acgtcgacct
      961 gtcgtgccta aagggattct gccccagttt cgtgaccctg cccggtccgc cggttgctcc
     1021 ggccgccgat accacctggc aggcgcgtga gagcgagttc gccgcggcgt tgccgcagcc
     1081 gattgtgccg tcgccggatg tatggcgcgg cctgtttgcc ggcattggcg gcggcggcat
     1141 cgtgacagcc ggtgccattc tggcaatggc ggcgcatctg gaagggcgcc acgtcaagac
     1201 cctggatttc accggcctcg cgcaaaagaa cggcgcagtt gtggcgcatg tgcagatcgc
     1261 caccgattcg gatgcgttgg acgtcgtgcg tattccgatc ggaactgcga atttgatgct
     1321 ggcggcggat ctggcggttg ggtgctcggc gggcgtgctg gaacgcaatg ccagcgacgc
     1381 cgtggtcatc ggcaatctgg acctggcggc gacggccgag ttcaaacgcg attctctgtt
     1441 gtcgatcgat gcgttgctgc atcggcgcac catcgaaaaa gttaccgatg ccaaggcgtc
     1501 ggtttggctg cacggggtgc tgttggccga gcgtctgttc ggcaacacac aggccatgaa
     1561 caccttgctt ctgggtctgg cgtggcagcg cggcctggtg ccggtcggcg aggcggcgat
     1621 cttgcgagcg atcgaactca atggtgctgc ggtcgcactg aaccgacgcg cttttctgtg
     1681 gggtcggatc gttgccgaac gtcccgaact gaccgaccac attctggggc aggccactgc
     1741 ggcgccgttg caactgccgg aactgatcga ggcacgcgct gcggcattgg ttgactacca
     1801 gtcatctgcc tatgccgcgc agtatctgtc ggtgatccgg gaagccaccg cacgcgaaa
//
LOCUS       DATAVD010001379         2222 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3480712, whole genome shotgun sequence.
ACCESSION   DATAVD010001379 DATAVD010000000
VERSION     DATAVD010001379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2222
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3480712"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..292
                     /locus_tag="VHX39_26410"
     CDS             <1..292
                     /locus_tag="VHX39_26410"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014189731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEX3994724.1"
                     /translation="GTQFQRSVWTGLTTIAAGQTMSYGGLAAKLGCPKAVRAVGTANG
                     SNPISIVVPCHRVIGADGSLTGYGGGIERKRWLLRHEGAAFRDDPVHQTLAA"
     gene            complement(503..913)
                     /locus_tag="VHX39_26415"
     CDS             complement(503..913)
                     /locus_tag="VHX39_26415"
                     /inference="COORDINATES: protein motif:HMM:NF037830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994725.1"
                     /translation="MKLALDENLPPSLARAADALLQPERGQAISIPERFGRGFSDIDW
                     ISALHDEGEWAVLTTDRKLRTRPHERLALERSGLVVFILAPGWNQEGYWRKAAGVIRW
                     LPSMIDAMAQYSPPALLSVPHRWTPGPVRRFQAR"
     gene            complement(910..1596)
                     /locus_tag="VHX39_26420"
     CDS             complement(910..1596)
                     /locus_tag="VHX39_26420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994726.1"
                     /translation="MNANSDLLGVGLYTIGEVARLAEVTPARVRGWVQGYAQGVGKPR
                     RAPVIDRRLPDLEGKTALSFRELIEVRFVRHFLRAGVSWHVLRRAAHEARRELLGDNG
                     ARLRFSTDGVTVFADALAKAGDRRARDLVANQYVLLAILEQSLQSEFDLDADSLIRAW
                     TPRRETPLVVVNPSRSFGRPIVEPGIPTSTLTGALSAEHGDTARVAAIFDTTEEAVRQ
                     AAAFEMTLAA"
     gene            1772..>2222
                     /locus_tag="VHX39_26425"
     CDS             1772..>2222
                     /locus_tag="VHX39_26425"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3994727.1"
                     /translation="MRIVTLEEHYTVPGIVSRIDPAAIRRRGFPGPDVVWGQQIKRNE
                     LADLGDARLADMDKSGITVQVLSVAGPGADVVPGEAGIQMARDYNDALAEAVARHPDR
                     YRGFAHLPLLAPEAAADELERTVKHLGFHGVLVNGATDGLFLDDPRFE"
BASE COUNT          427 a          742 c          670 g          383 t
ORIGIN      
        1 aggcacgcag ttccaacgca gtgtttggac cggtctcacc acaatcgcgg ctggccagac
       61 catgagctac ggcggcctcg ctgccaaact gggctgtcca aaagccgtgc gtgccgttgg
      121 cacggccaac gggtccaacc ccatcagcat tgtggtgccg tgtcatcgcg tgatcggtgc
      181 cgatggctcg ttgaccggct acggtggtgg gatcgagcgc aaacgatggc tgctccggca
      241 cgaaggcgcg gcatttcgcg acgatccggt acaccagacg ttggcggcct agcagaatgc
      301 atcatattcg catagacagg agcgtaagtg tcgatcgacc gccaggacag ctgcgacgtt
      361 cgttttgaac cagcattgtt tctgcggagt acccggcaat ccaggcgtga tcgttgcgcg
      421 ccgtggcacc cgcctgtggc ctcgttgcag cgcgcggcgc agatttgcaa cgcggacggc
      481 ccgaaggtgg gtggcgggtc cgctaccgtg cctgaaatct ccggacaggt cctggtgtcc
      541 aacggtgcgg caccgacagc aacgccggtg gcgaatattg cgccatcgcg tcaatcatgc
      601 tcggcaacca acggatgact ccggccgcct tacgccagta cccttcctgg ttccatccag
      661 gcgcgaggat gaacaccacc aggccagatc gttccagagc caaccgctcg tgcggtcggg
      721 ttcgcagctt gcgatcggtg gtcaacacag cccattcgcc ttcgtcatgc agcgcgctga
      781 tccagtcgat atccgaaaag ccgcgtccaa accgctccgg aatgctgatc gcctgaccgc
      841 gctccggttg caacaaggca tctgccgccc gagcgagcga cgggggtagg ttctcatcca
      901 gcgcaagctt cacgccgcca gcgtcatctc gaatgcagcg gcctgccgta cggcttcctc
      961 agttgtatcg aaaatcgccg caacccgggc agtatcacca tgttccgcgc tcagcgcgcc
     1021 cgtgagcgtt gaagtcggga tgccaggctc aacaatcggg cgcccaaacg agcggctcgg
     1081 attgaccacc accaacggtg tctctcggcg cggtgtccac gcccgaatca gactatcggc
     1141 gtccagatcg aactcgcttt gaagactttg ttccaggatc gcaagcagca cgtactggtt
     1201 cgccaccaga tcgcgcgcgc gccgatcgcc cgccttggct aaagcatctg caaatacggt
     1261 cacgccatca gtcgagaacc gcagccgcgc gccgttgtca ccaagcagct cccgccgtgc
     1321 ctcatgggcg gcccgccgaa gcacgtgcca cgacacgccg gcgcgcagga agtggcgaac
     1381 aaagcgaacc tcgatcagtt cacggaaaga cagcgcagtc ttgccctcga ggtccggcag
     1441 gcgtcggtct atcaccggcg cgcggcgcgg tttacctaca ccttgcgcat agccctgaac
     1501 ccacccgcgc acccgtgccg gggtcacctc agcaagacgg gcgacctcgc cgatagtgta
     1561 aaggccgacg cctaaaagat cggagttcgc gttcacggcg ttatcctacg tttatgcgac
     1621 ggttcgtcac aaggttgttc cacggccgtg tcaacggccc tgccttggga tcgggcccca
     1681 cggaagaagt gtaacccttc ggactcgacg cccatagcgc ccacgctgac gccgtgccac
     1741 gcttccgcca aatcacccag ggagcaaccg catgcgcatc gtcacattgg aagagcacta
     1801 caccgttccc ggcatcgtca gccggatcga ccctgccgcc atcaggcgcc gcggctttcc
     1861 cgggccggac gtcgtctggg gacagcaaat caagcgcaac gaactggctg accttggcga
     1921 cgcccgcctc gccgacatgg ataagagcgg gattaccgtg caggtgctct cggttgccgg
     1981 cccaggagcg gatgtcgtgc cgggtgaagc gggcatccaa atggcaagag actataatga
     2041 tgctctggcc gaagcggtcg cccgccatcc cgaccgctat cgcggcttcg cgcacttacc
     2101 gttgctcgcg cccgaggcgg cagccgacga attggagcgc acggtcaaac acctcggctt
     2161 tcacggcgtg ctggtcaacg gcgcgactga cgggctgttc ctggacgatc cgcggttcga
     2221 gc
//
LOCUS       DATAVD010001380         1622 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2924124, whole genome shotgun sequence.
ACCESSION   DATAVD010001380 DATAVD010000000
VERSION     DATAVD010001380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2924124"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..215
                     /locus_tag="VHX39_26430"
     CDS             <1..215
                     /locus_tag="VHX39_26430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycerol-3-phosphate ABC transporter ATP-binding
                     protein"
                     /protein_id="HEX3994728.1"
                     /translation="PVPEGAGMPAKVALVEPLGSDTLVHFLVGEIRCIARVAPDTKPR
                     VDECLHLGVAHGKAYLFDSETGALLA"
     gene            253..>1622
                     /locus_tag="VHX39_26435"
     CDS             253..>1622
                     /locus_tag="VHX39_26435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008495504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEX3994729.1"
                     /translation="MNRPHRHLNELRSQRWYAGTEIRGFAHRQRSLQMGLRREEFMGK
                     PVIGIINTWSELSPCHIHLRERAEAVKRGVWQAGGYPVELPALSLGEVLVKPSTMLYR
                     NMLAMEVEELLRSLPVDGAVLMGGCDKTTPALLMGAISMDLPAIFCPAGPMSNGKFRG
                     ELVGAGTHTKKYWEEKRAGNISEADWIDLESRMTRSIGTCNTMGTASTMTSIVDAMGL
                     TLPGASSIPAADAGHPRMASACGERAVGMVWEDMKLSSLLNRRVFENGITACMALGGS
                     TNAAIHLIALARRAGIVLSLDDLSAVAAKIPVCANLYPSGQHLMEDFFFAGGLLALLR
                     KLGGAIDPNCMTVNGLTLGENIADAPCYDDDVIRDPEHAVVPLAKGVTLAVVRGNLCP
                     DGAVIKTSAASPHLLRHTGRAVVFDNPAEMAARIDDPACGIDETSVLVLRNAGPVGAP
                     GMPEWG"
BASE COUNT          281 a          504 c          518 g          319 t
ORIGIN      
        1 tgccggtgcc ggagggcgct ggaatgccgg ccaaggtcgc tttggtggag ccgctcggct
       61 ccgacacgct ggtgcatttt ctggtcggcg agatccgctg tatcgcccgc gtcgcgcctg
      121 atacgaagcc gcgtgttgac gagtgcctgc acctcggcgt cgcacacggc aaagcatatc
      181 ttttcgattc tgaaaccggc gcgctcctcg catgacggcg ccagacaata tctttcagca
      241 tggagtgctg cgatgaatcg tccgcatcgt cacctgaacg aactgcgcag ccagcgttgg
      301 tatgccggta ccgaaatccg cggttttgca catcgccagc gcagcctgca gatggggctg
      361 cgccgcgagg agtttatggg caagccggtg atcggcatca tcaatacatg gagcgaactc
      421 agcccctgcc acatccattt gcgtgagcgc gcagaggcgg tgaagcgcgg cgtctggcaa
      481 gccggtggtt acccggtcga gttaccggca ctctcgcttg gcgaggtgtt ggtgaaacct
      541 tccaccatgc tttatcgcaa catgctggcg atggaggtgg aagagctgct gcgctcgctg
      601 ccggtggacg gcgccgtgct catgggcggc tgcgacaaga ccacgcccgc tttgctgatg
      661 ggggccatca gcatggatct tccggcgatt ttctgccccg ctgggccgat gtcgaacggc
      721 aaattccgcg gagaactggt cggcgccggc acccatacga aaaagtactg ggaggagaag
      781 cgcgctggca atatttcgga ggcggactgg atcgatctgg aaagccgcat gacaaggtcg
      841 atcggcacct gcaacaccat gggtaccgcc tcgaccatga cctcaattgt cgacgccatg
      901 ggccttacct tgcccggtgc ctcgtcaatc cccgcagccg atgccggtca tccccgcatg
      961 gcctcggcgt gtggggagcg tgccgtcggc atggtgtggg aggatatgaa gctctcctcc
     1021 ctgctcaatc gccgggtttt cgaaaacggc attaccgcct gcatggcgct cggcggttcg
     1081 accaatgccg cgatccacct gatcgccctg gctcgccgcg ccggcattgt cctcagcctc
     1141 gatgatctgt cggcggtcgc ggccaagatt ccggtttgcg ccaatctcta tccttcaggg
     1201 cagcatctga tggaggattt ctttttcgcc ggtggtctgc tcgctttgct gcgcaagctc
     1261 ggtggcgcga tcgacccgaa ctgcatgacc gtcaacggcc tgacgctagg cgaaaacatc
     1321 gccgatgcgc cgtgctatga tgacgatgtg atccgggacc ctgaacacgc cgtcgtgccg
     1381 ctggccaagg gtgtaacgct cgcggtcgtg cgcggcaacc tctgcccgga tggcgcagtt
     1441 atcaaaacca gtgccgccag cccgcacctg ttgcgtcata ccggcagagc cgtggtgttc
     1501 gataatcccg ccgagatggc ggcgcggatc gacgaccctg cttgcggcat cgacgagacc
     1561 tccgtgctgg tgctgcgcaa tgcggggccg gtcggcgccc ccggcatgcc ggaatggggc
     1621 aa
//
LOCUS       DATAVD010001381         4181 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1248651, whole genome shotgun sequence.
ACCESSION   DATAVD010001381 DATAVD010000000
VERSION     DATAVD010001381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4181
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1248651"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(402..1856)
                     /locus_tag="VHX39_26440"
     CDS             complement(402..1856)
                     /locus_tag="VHX39_26440"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX3994730.1"
                     /translation="MRSRTLKWAACGLAALTLIRLFVASIAPLAPDEAYYWVWSHAIA
                     AGYLDHPPMVALWIRAGTALAGDNAIGVRLLGPFAAAFGSVLVYDTAERLFPGRSAGL
                     TAAALLNGTLVLGVGSVIMTPDTPLLLFWTAALWAGARLAMGGMPAWWLAAGVFSGLA
                     LVSKYTGAFLPIGLGLFGLMGMPRVLRRLEPWAGGVIAGVMFLPVVLWNAQHGWVGFL
                     RQGGRVGDWRPERAAQFLGELVGGQIGLATPGIFVLFAVGIVVAIRMTVRLRDPAWTL
                     LAALSVPPVLVFVQHAIGDRVEGNWPAIVFPAAAVAAAGLPGPVWRRWTGPSCVLGFV
                     IAAGVYGHVLTGWPSIPGGRDPVARQLFGWPDLAASVETVRQTVHADFIAAEPYGVAA
                     ELAWSLPPDVAVLGFGSHWAFTTLPRAETGDRYGLLIRPERYGDALDSHEWREVTRLP
                     DVARTGASGEIERYAVFCVRSAGETTSGMLLPHR"
     gene            complement(1861..2991)
                     /locus_tag="VHX39_26445"
     CDS             complement(1861..2991)
                     /locus_tag="VHX39_26445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008851539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3994731.1"
                     /translation="MQETLRMSIADEDGASRALSVIVPSYNERPNVAPMIEKLDNALR
                     GIDWEVIYVDDNSPDGTAAEVRRIAGMDPRVRCIRRVGRRGLASAVIEGALSSSATYV
                     AVIDGDLQHDETRLPVMLAELRSGQYDLAVASRYVEGGNTEGLATQWRHLLSDGGIWL
                     AQQVLPVKLADPMSGFFMLPRTLFEQLAPQLTGQGFKILLDLVLSAPATLRVKEVPAG
                     FHERVAGESKLDALVVLQFGGLLLDKTFAGYLPLRFASFAVVGAVGVMVHLSVLAVLR
                     NLTLLNFGGEQTIATLVAMVFNFELNNAVTYADQRLRGPRLWRGLLLFMAVCGVGAVA
                     NIGIAKSLYDSNTNWSVAGAMGAVIGVVWNYAVSATLVWRAR"
     gene            complement(3132..>4181)
                     /locus_tag="VHX39_26450"
     CDS             complement(3132..>4181)
                     /locus_tag="VHX39_26450"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEX3994732.1"
                     /translation="GIFFDGQSNRRHIVELHLARTMQIMEDGVCLASWPFQDVRRVDA
                     AQGALRLSSVSAAPLARLELRDPASWPDIESHCPLLRGPGSVQSISVLRIAVWSLAAT
                     SVIAGLIWFGVPLISDQVAEVLPIAWERPLGEAVEQQVHQIFPGKPCTAPDGRAALGK
                     LVAELQTAARLPIVPDPVVLRSGIPNAFALPGGRVYVLSALLGRARSPDELAGVLAHE
                     FGHVSHRDGLRRLIRDGGTAFLVGLLFGDVSGAGAALFAARSLLSAAYARDIEAGADG
                     FAITVMHRLGRPTAPLGDLLQRLGGPGSTQLSLLADHPLTPDRVQRLKQEDAAASGPD
                     LLDPVEWQALRKICE"
BASE COUNT          930 a         1453 c         1189 g          609 t
ORIGIN      
        1 gcgctgcatt cgccatgggg atgactgcta tgtcaaatcg aaatctcctg tcaatatatg
       61 atagaacgcc ggcctgtcgc tttgaccaca acatattgcg attgtggcgt caaatgcata
      121 attgggatta aaatccggcg taggcgcgga ccggggcgta ggaatgtgcc accaatgtca
      181 ggggcgatgc cgcgaccagc gccataagtt attatttcag aggaacagag gtactgagta
      241 acagagaaga tcaatcgacc ttccaggtcg cggcagcaaa agacaacaaa gataattaca
      301 aataggatgt aggccgtgac catacttttg cgaaaatata catattccgt cctgaatatc
      361 tgagaagtct cttaatgacc ggtatccgca gcataacgcg atcagcgatg cggcaacagc
      421 atccctgagg tcgtttcgcc ggcgctgcgc acacagaaca cggcgtagcg ctcgatctcc
      481 ccacttgcac cggttcgggc aacgtcaggc aggcgagtca cctcgcgcca ttcatgcgaa
      541 tccaacgcat caccgtaacg ttccgggcga ataagaaggc cgtacctgtc gccggtctcc
      601 gcccgaggca gcgttgtaaa agcccagtgg gaaccaaagc ccagtacggc aacatccggc
      661 ggcagcgacc acgcaagttc ggccgcgacc ccatacggct cggcggcgat gaaatcggca
      721 tggaccgttt gccgcacggt ctcgacgctg gccgccagat cgggccagcc aaacaattgt
      781 ctcgcgaccg gatcacgccc tccgggaatg ctcggccatc cggtcaggac gtgcccgtaa
      841 acgccggccg caatgacgaa gcccagtaca caggaagggc ctgtccaacg ccgccagacc
      901 ggaccgggta gaccggctgc cgcgacggct gccgccggga agacaatggc gggccagttc
      961 ccctccaccc gatcgccgat cgcatgctgc acgaacacca gcaccggagg caccgacaac
     1021 gcggccagca gcgtccacgc cggatcgcgc aatcgcactg tcatccggat cgcgaccacg
     1081 atcccgaccg cgaacaaaac gaaaatcccc ggcgtggcca ggccgatttg gccgcccacc
     1141 aactcgccga gaaactgcgc tgcccgttcc ggacgccagt cgccaacccg gccgccctga
     1201 cgcagaaatc caacccaccc gtgctgcgca ttccacagca cgaccggcag aaacatcacc
     1261 cctgcaatca ccccgcccgc ccaaggctcc aatcgtcgca acaccctggg cattcccatt
     1321 aaaccgaaca gcccaagacc aatcggcagg aaagcgccgg tgtacttgct caccagtgca
     1381 aggccgctga acacgccggc agcaagccac catgccggca ttccacccat cgcgaggcgc
     1441 gcgcccgccc acaatgccgc cgtccaaaac agcagcaacg gcgtatccgg cgtcatgatg
     1501 accgagccaa cgccaagcac caacgtgccg ttcaacagag ccgcagcggt cagccccgcg
     1561 ctgcgtcctg gaaacagccg ttcggcggtg tcgtagacca acacagagcc aaacgcggcg
     1621 gcaaaaggtc ccagcagccg aaccccgatc gcgttgtctc cggcgagcgc agtcccagcc
     1681 cggatccaca gcgccaccat cggcggatga tccagatatc cggcagcgat cgcatgcgac
     1741 caaacccagt aataggcctc gtccggcgcc agcggcgcaa tggacgcaac gaacagacgg
     1801 atcagggtca gcgccgccaa cccgcaggca gcccatttca gcgtgcgcga gcgcacggcc
     1861 tcatcgcgct cgccagacca aagtcgccga cacggcgtag ttccaaacga caccgataac
     1921 ggcacccatc gcgccggcaa ccgaccagtt cgtattcgag tcatacaacg acttggcgat
     1981 accgatattg gccactgcgc caacgccgca caccgccatg aacaacaaca atccacgcca
     2041 cagccgaggc ccgcgcagcc gctgatcggc ataggtgacc gcgttgttca attcgaaatt
     2101 gaacaccatc gccaccagcg tcgcgatcgt ctgctcgccg ccaaagttga gcaacgtcag
     2161 gttccgcaac accgcaagca ccgacagatg caccatgacg ccgaccgctc caaccacggc
     2221 gaacgaggca aagcgcaacg gcaaataacc cgcaaaagtc ttgtccagca gcagtccgcc
     2281 gaactgcagc acgacaagcg catccagctt gctctcgccg gcgacgcgtt cgtggaaccc
     2341 ggccggcact tccttgaccc gcagtgtcgc cggcgcactc agcacaaggt ccagcaagat
     2401 cttgaagccc tggccggtga gttgcggcgc aagctgctcg aacagcgtgc gtggcagcat
     2461 gaaaaagccg ctcatcgggt cggccagttt gaccggcagg acctgctgcg ccaaccagat
     2521 gccgccatcc gacagaagat gccgccactg ggtggcgagg ccctcggtat tgccgccctc
     2581 gacataccgg ctggccacgg cgagatcgta ttgccccgac cgcaactcgg cgagcatcac
     2641 cggaagccgg gtttcatcgt gttgcaggtc gccatcgatg accgccacat aggtggcaga
     2701 cgacgacaac gccccctcga ttaccgcaga ggccaggccg cgccgtccaa cccgccttat
     2761 gcagcgaacc cgaggatcca tgccggcgat gcgccgcacc tcggcagccg tgccgtccgg
     2821 gctgttgtcg tcgacataga tgacctccca gtcgatgccg cgcagcgcat tgtcgagctt
     2881 ctcgatcatc ggtgcgacat tcggccgctc gttgtagcta ggcacgatca cgctgagagc
     2941 ccggctggcg ccatcttcgt ctgcgatgct catgcgcagg gtttcttgca tgccgtccga
     3001 ttcccgcttt caggtcgtaa ccggccgatt tgggccagag atagtgtcgc tccgatggca
     3061 ggacaggcca aggccggttg ggtttcggcg ccgggctctg aaccgcgggg acgccggacc
     3121 ggcaggcatc atcactcgca aatcttgcgc aatgcctgcc attccaccgg gtccagcagg
     3181 tccggcccgg acgctgctgc atcttcttgc ttcaggcgtt gcacgcgatc cggtgtcagc
     3241 ggatggtccg ccagcagcga caattgcgtg ctgccgggtc cgccgagtcg ctgcagcaga
     3301 tcgcccaacg gcgccgtggg ccggccaaga cggtgcataa ccgtaatcgc gaacccatcc
     3361 gctccggcct cgatatcccg ggcatacgcc gcactcagca acgaccgtgc ggcaaacaac
     3421 gcagcaccgg ccccggagac atcaccgaac agcaggccga ccagaaacgc cgtgccgccg
     3481 tccctgatca gccggcgcag gccatcccga tgcgagacat gcccgaactc atgtgccagc
     3541 acgcccgcaa gttcgtccgg cgaccgggct cggccaagca gcgccgagag cacgtaaacc
     3601 cgcccccccg gcaaggcaaa ggcattgggg ataccagagc gcaagacaac cggatccggc
     3661 acgatcggca gccgagccgc ggtttgcagc tcagccacca gcttgcccaa tgcagcgcgc
     3721 ccatcggggg cggtacacgg tttgccgggg aaaatctggt gaacctgctg ctcgaccgcc
     3781 tcccccaacg gccgctccca ggcgatcggc aaaacttcag ccacctggtc ggagatcaag
     3841 ggcacgccaa accagatcaa accagcgatc accgaagtgg cggccaacga ccacaccgca
     3901 atgcgcagca ctgaaatgga ttgcacgctg ccgggaccgc gcaacaaggg acagtggctt
     3961 tcgatgtccg gccacgacgc cgggtcgcgc agttcgagcc gggcgagcgg agcagcgctg
     4021 accgaactca gccgcagtgc accctgcgcc gcgtcgaccc gccgcacgtc ctgaaacggc
     4081 cacgacgcca ggcaaacgcc gtcttccatg atctgcattg tgcgggccag gtgcagttcg
     4141 acgatgtgcc gacgattgga ttgtccgtcg aagaagatgc c
//
LOCUS       DATAVD010001382         6154 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_878774, whole genome shotgun sequence.
ACCESSION   DATAVD010001382 DATAVD010000000
VERSION     DATAVD010001382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6154
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_878774"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..643)
                     /locus_tag="VHX39_26455"
     CDS             complement(<1..643)
                     /locus_tag="VHX39_26455"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3994733.1"
                     /translation="MPRLNGRKILITGGASGIGRATAVLCANEGASVAVLDRSADAAN
                     EVAAGIGGKAFVVDVADPASVNAAVEQAAAAMGGLDGVVNAAGIFSSEGLTDTSPELF
                     NRILTVNITGTFLVIRAAERFLRASDHATIVNIGSGVGLKPTGPGSTAYVASKGGVIA
                     MTRVLAMELAPKIRVNVVCPGMVETAMTESFLRNNLGEIRPEIARLYALGRAAS"
     gene            complement(682..2358)
                     /locus_tag="VHX39_26460"
     CDS             complement(682..2358)
                     /locus_tag="VHX39_26460"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3994734.1"
                     /translation="MPTMPGKIALLELLKQEGVRVMFGNPGTTELPLMDAFAAERDIR
                     YVLALQEAPAMGMADGYAQASGQLACVNLHAAPGLGNAMGMLYDAQKAGAPIIVTAGQ
                     HEQRFNFTEPLLWADLPVVARPFVKWSEEVRRLADLPRAIHRAAKTALAPPTGPVFLS
                     LPGDVLTDSDDLDLGFPTRVAANLRGDAGAIAAAARLMASAKSPVIIAGDAVPQGDAL
                     AELVTFAEALAAPVYDEGMATRAMFPSSHPLYRGALVRLPAAIRGMLGQHDLLVSIGA
                     DLFTLSLPDDVDAMPEGLSTIHLDTNPWELGKNYPAKVAILGGPKATLPEMTQALLAA
                     RSGTDVVQVAKRLEHARAEGISSLARLHANADALAERQPIHPLALMQAVGRVLPADAV
                     VIDETISSGTGLRRFLKSDDPQSFFGMRGGGIGWGLPAAIGAKIALPDRPVVALLGDG
                     SALYTIQGLWTAARENLRMVFVIINNYSYRILKQRTNAMKGLAAQTDSYVGMDLDRPR
                     VDFVAVARGLGVTAHRASTLAEVCDLLEAALQHDGPTLLDVEVDRAWKPV"
     gene            2454..3674
                     /locus_tag="VHX39_26465"
     CDS             2454..3674
                     /locus_tag="VHX39_26465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3994735.1"
                     /translation="MRKLSRRLALGGLAATPLATPGLIRAQSTSKPVRLGLLSDMGGP
                     YRDVGGPGNRVAAELAVADFGGSVLGRPIEVLQADDQNKPDVASSIARQWMDDGVDAV
                     ADGAASSSGLAIQQIAKEKKRPYLITGPATSDMTGKQCTPYGIHFCYDTYALSHGTGT
                     ALTKNGGDSWFFITADYAFGYALERDTMAAVKAAGGKVLGAVRAPLGTADFSSFLIQA
                     QGSGAKVIGFANAGTDLQNCIKQSAEFGLTKNGAKIATLLMAINDVNSLGQRVCEGLI
                     YTDSFYWDLNPGTRDFAKRWGEKFGGMVPGLLHAGNYCATNHWLKAVKAAGTTDADAV
                     VAKMKATPVNDFYNTNVKIREDGRVMHVMYLWQVKPVAQAKSKYDFCNKLATISPEEA
                     WRPLSEGGCPLVKA"
     gene            3764..4798
                     /locus_tag="VHX39_26470"
     CDS             3764..4798
                     /locus_tag="VHX39_26470"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3994736.1"
                     /translation="MVLARVMLLMAALIVAVCRPAGAEDTLQKITIASAGKGMSFIMQ
                     YVAIGAGYYKDEGLDPETIDVSSGTRQAAAVMGGSADFTQLGMPHTLRAVARGGDLVA
                     IGSGFDKYPIALVISKTAVQKLGITDAMPPDEKIKRLHGLTIGITSPGSSTDEFMRTI
                     MMVRGMDPDKDIKLQPIGIGAPMVAAMQQGSTDGFAFMSPFTDIAVSRGIGTVIADPM
                     QDNLPEYHDVPYQVITTSRKTVEAKRPILLAAERAMTRAMLLCHEHPDQAKRIVRDVF
                     KEVDDADFNIAFDTYVKAVPTTPVVSQTQVSNTLKMLNLSEKTPLSPTYDQVTDMTMA
                     REAAKAFPGN"
     gene            4800..5576
                     /locus_tag="VHX39_26475"
     CDS             4800..5576
                     /locus_tag="VHX39_26475"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3994737.1"
                     /translation="MAAQQLHANDGIPIVVWQIGVGIGLLGAWEAVGHTASGEWTSRP
                     LLIGQRLLQWFSGPLYPHLATTAIEVVAGLLVGVLCGSVTGLFLGRSPVLAVVLRPII
                     VAFYSVPLVALAPLFIMFFGLDILPKLVLVSIVVFFLMFFNTFAGAGQVDDDHIAAVR
                     LMGSTRRENFQKVVVPACMVWIIGGIRIALPFALVAATTGEMLAARRGIGFLLSDAAN
                     QFDMTGLYAALVILMALGLAVSEAAAAMERQLLRWRDATQ"
     gene            5563..>6154
                     /locus_tag="VHX39_26480"
     CDS             5563..>6154
                     /locus_tag="VHX39_26480"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3994738.1"
                     /translation="MPLSDPGTVARLRLAGASKRFAIHGGEVEALRPVDLTVQKQEFV
                     ALVGPSGCGKSTILNLAAGLLRPTDGTVFYDEQPVTTINRSVGYMTQKDTLLPWRHTA
                     DNIRMALELKCRAMPRDEAASRVEQIIELIGLKGFERHFPAQLSGGMRKRVALARTLI
                     YEPETLLMDEPFGALDAQLKLLMLHELQKLTQLRRMT"
BASE COUNT         1191 a         1875 c         1947 g         1141 t
ORIGIN      
        1 ccgaggcagc gcggcccagt gcataaagcc tggcgatttc cggccggatc tcgcccagat
       61 tgttgcgtag gaaactttca gtcatcgcgg tttcgaccat gccgggacac accacgttga
      121 cgcggatttt cggagccaac tccatggcca gcacgcgggt catcgcgatg acgccaccct
      181 tcgaggccac ataagccgtg cttcccggcc cggtcggctt cagccccaca ccggagccga
      241 tattgacgat cgttgcgtgg tcggaagcgc gcaggaaccg ttcggcagca cggatgacca
      301 ggaacgttcc ggtgatgttg acggtcagga tgcgattgaa caattccggt gacgtatcgg
      361 tcaggccctc ggacgaaaag atacccgccg cgttgaccac gccatcgagg ccgcccatcg
      421 ctgccgccgc ctgctcgacg gcggcattga ccgaggcagg gtcagcgaca tcgaccacga
      481 acgctttacc gccgatgccg gcagcaacct cattggcggc gtctgccgaa cggtcgagca
      541 cggcgaccga cgcgccttcg ttggcgcaca gcacggcagt cgcccggccg atgccggatg
      601 ccccgccggt gatcaagatc ttacgtccgt tcagtcgtgg catgttggtt tccccttatc
      661 cggtctgcaa aacatcgaac ctcagaccgg cttccacgcc cggtcgacct cgacatcgag
      721 cagggtcgga ccgtcgtgct gcaacgccgc ttccagcaaa tcgcacactt ccgccagcgt
      781 actggcacgg tgcgcggtca cgccaagacc tcgcgcaact gcaacgaagt cgacccgcgg
      841 ccggtcgagg tccatgccga cataagagtc ggtctgcgcc gccaaccctt tcattgcatt
      901 ggtccgctgc ttaagaattc gatacgaata attattgatg attacgaaca ccatgcgcag
      961 gttctcccgc gccgcggtcc acagtccctg aatggtgtaa agcgctgagc cgtcgcccag
     1021 aagtgcgacc accggccgat ccggcagcgc gattttggca ccgatcgcgg ccggcagccc
     1081 ccaaccgata ccaccgcctc gcatgccaaa gaagctttgc gggtcatcgc ttttcaaaaa
     1141 ccggcgaagc ccggtgccgg aggaaatggt ttcgtcgatc accacggcat ccgctggtaa
     1201 cacgcggcca accgcctgca tcagtgccaa cggatggatc ggttggcgtt ccgccagagc
     1261 gtccgcgttc gcatgcagcc gtgccaggct gctgatccct tccgcgcgcg catgctccaa
     1321 ccgtttcgct acctgaacca catcggtgcc gctccgcgcg gccaacaacg cctgcgtcat
     1381 ctccggcagc gtcgctttag ggccacccag aatagccacc ttcgccggat agttcttgcc
     1441 aagttcccac ggattggtgt cgagatggat ggtggaaagc ccttccggca tggcatcgac
     1501 atcatccggc aacgacagcg tgaacagatc ggcgccgatc gacaccagca aatcgtgctg
     1561 acccagcatg ccgcggatcg ctgccggcag ccgcaccagc gcgccgcggt acagcggatg
     1621 cgaggacggg aacattgccc gcgttgccat gccctcatcg tacaccggtg cggcgagcgc
     1681 ttcggcgaaa gtcaccagtt cggccagcgc atcgccttgc ggcacggcat cgccggcaat
     1741 gatcaccggc gatttcgcac ttgccatcag tcgcgcggcg gcggcgatcg ctccggcatc
     1801 accgcgcagg ttggcggcga cccgggtcgg aaagcccaga tcgagatcgt cggaatcggt
     1861 cagcacatcg cctggcagcg acaaaaacac cggcccggtg ggaggcgcca acgcggtctt
     1921 ggcggcacgg tgaatggcgc gcggtaagtc ggcaagccga cgcacttcct cggaccattt
     1981 tacgaacggg cgtgccacga ccggcagatc ggcccacagc agcggttcgg taaagttgaa
     2041 ccgctgttcg tgttggccgg cggtgacgat gatcggagcg cccgccttct gcgcatcgta
     2101 caacatgccc atggcgttcc cgaggccggg tgcggcatgc aaattcacgc atgccaattg
     2161 tcctgaggcc tgcgcataac cgtcggccat gcccatcgcc ggcgcctcct gcaaagccag
     2221 cacatagcga atgtcgcgct cggcagcgaa ggcgtccatc agcggcagct cggtcgtgcc
     2281 ggggttgccg aacatgaccc gcacaccctc ctgcttcaac aattccagca aggcaatctt
     2341 tcccggcatc gtgggcatag gttgttcctc gggtgagtga tttggcgtag tggttccgct
     2401 acaaggctcg gcatggcgaa tcaagcacgc cgagctgaac aaggagtcgc attatgagga
     2461 agctgtcccg ccgtctcgct ttgggaggcc tcgcggccac gcccttggcc acccccggcc
     2521 tgatccgggc gcaaagcacg tccaagccgg tgcggctcgg gctgctgtcg gatatgggcg
     2581 gaccgtatcg ggatgtcggc gggccgggta accgcgttgc ggccgaactg gcggtggccg
     2641 atttcggtgg ctccgtactc ggccgcccga ttgaggtgtt gcaggcggac gatcagaaca
     2701 aacccgatgt ggcatcgtcg attgcccgcc aatggatgga cgacggcgtc gacgcggtgg
     2761 ccgatggcgc ggcgagctcc tccggccttg ccattcagca gatcgccaag gaaaagaaac
     2821 ggccgtatct gattaccggt ccggcgacgt cggacatgac gggcaagcag tgcaccccgt
     2881 atggcattca tttctgctac gatacctatg cgctgtcgca tggcaccggc acggcactga
     2941 ccaaaaatgg cggcgacagc tggttcttta tcaccgccga ctacgcgttt ggctatgcgc
     3001 tggagcgcga taccatggca gccgtcaagg cagccggcgg aaaggtgctt ggcgcggtgc
     3061 gggcgccgtt gggcacagcg gatttctcca gtttcctgat tcaggcgcaa ggttccgggg
     3121 cgaaagtcat cggtttcgcc aatgccggca ccgatctgca aaactgcatc aaacagtcgg
     3181 cggaattcgg gttgaccaag aacggcgcca aaatcgccac cctcctcatg gccatcaacg
     3241 acgtcaattc actgggccaa cgagtctgcg aggggctgat ctacaccgac tcgttctatt
     3301 gggatctcaa cccgggcaca cgagacttcg caaagcgctg gggcgagaaa ttcggcggca
     3361 tggtgcctgg tctgttgcat gcgggcaact attgcgcgac caatcactgg ctgaaggcgg
     3421 tgaaggcggc aggcacgaca gatgccgatg ccgtggtggc aaaaatgaaa gccacgccgg
     3481 tgaacgattt ctataacacc aacgtgaaga tccgcgaaga tgggcgagtg atgcacgtga
     3541 tgtatctgtg gcaggtcaag ccggttgcac aggcgaaatc gaaatacgat ttttgcaaca
     3601 agctggcgac gatttcccct gaagaggcat ggcggccgtt gagcgagggg ggctgcccgt
     3661 tggtcaaagc gtaaatcctg tcaggatggc ccgttccgct tgcgtggcac cttcggcacg
     3721 ggcatcctga cggcaacaaa gtacgaattt acgggaggtc acaatggttc tggcacgcgt
     3781 gatgctgctg atggcggcat tgatcgtggc ggtctgccgg ccggcaggcg ccgaggacac
     3841 actgcaaaag atcaccatcg cctccgccgg caagggcatg tcgtttatca tgcaatatgt
     3901 cgccattggc gccggctatt acaaagacga agggcttgac ccggagacca tcgatgtttc
     3961 gtccggcaca aggcaggccg ccgcggtgat gggtggcagc gccgatttca cgcaattggg
     4021 gatgccgcat accttgcgcg cagtggcccg aggcggcgat ctggtggcca tcgggtcggg
     4081 cttcgacaaa tacccgatcg ctctggtgat cagcaaaact gcagtccaga aactggggat
     4141 taccgacgcg atgccgccgg acgagaagat caaacggctg cacggtctga ccattggaat
     4201 tacttcgccc ggctcgagca cggatgagtt catgcgcacg atcatgatgg tgcggggcat
     4261 ggacccggac aaggatatca agctgcaacc gatcggtatc ggcgcgccaa tggtggcggc
     4321 gatgcagcag ggcagcacgg acggcttcgc gttcatgtcg ccgttcaccg acatagcagt
     4381 cagccgcggg atcggcaccg tgattgccga tccaatgcag gacaacctgc cggagtatca
     4441 cgacgtgccg tatcaggtga tcaccaccag ccgtaagacg gtggaggcga aacggccaat
     4501 cctgctcgcc gcggagcgcg ccatgacccg ggctatgctg ctttgtcacg agcatccgga
     4561 tcaggcgaag cggatcgtcc gcgacgtttt caaggaagtc gacgatgccg acttcaatat
     4621 cgcattcgat acctatgtca aagcggtgcc gacgaccccg gtcgtgagcc aaacccaggt
     4681 gtcgaacacg ttgaagatgc tgaacctgag tgaaaagacg ccactcagtc cgacatacga
     4741 tcaggtgacc gatatgacga tggcgcgcga ggccgccaaa gcgtttcccg gcaactgacg
     4801 tggcagcgca acagctccac gccaatgacg gcatcccgat cgtcgtgtgg cagatcggcg
     4861 ttgggatcgg attgctgggt gcgtgggagg cggtgggcca cactgcctcg ggcgaatgga
     4921 ccagccggcc gctgctgatc ggccaaaggt tgctgcagtg gttttccggt ccgctttatc
     4981 cgcatctggc aacgactgcg atcgaggttg ttgcgggtct gctggtgggc gtgctgtgcg
     5041 gctcggtcac tggattgttc ctcggccggt caccggtcct ggcggtggtg ctgcggccga
     5101 tcatcgtggc attctacagt gtgccgctgg tcgcgctggc accgttgttc atcatgttct
     5161 tcggcctgga catcctgccg aagctggtcc tggtgtcgat cgtcgtgttc ttcctgatgt
     5221 tcttcaacac cttcgccggt gccggtcagg tcgacgacga ccacatcgcg gcggtccgcc
     5281 tgatgggctc cacgcgacgc gagaacttcc agaaagtggt cgtgcctgct tgcatggtct
     5341 ggatcatcgg cgggatccgg atcgcgttgc cgttcgcctt ggtcgcggca accaccggcg
     5401 agatgctggc ggcgcgccga ggcattgggt ttctgctgag cgatgccgcc aatcagttcg
     5461 acatgaccgg tctgtatgcg gctctggtca ttctgatggc gcttggcctc gcggtatccg
     5521 aagcagcggc agcgatggag cggcaattgc tgaggtggcg cgatgccact cagtgatccc
     5581 gggaccgtgg ccaggctgcg gctggccggg gcgagcaagc ggttcgccat acatggcggt
     5641 gaggtggagg ctctgcggcc ggtcgatctg acggtgcaga agcaggagtt cgttgcgctc
     5701 gtcgggccca gtggttgcgg gaaatcgacg attttgaacc tcgctgcggg cttgctgcgt
     5761 ccgaccgacg gcacggtgtt ttatgatgaa cagccggtga cgacgatcaa tcggtccgtt
     5821 ggttacatga cacaaaagga cacgttgttg ccgtggcggc ataccgccga caatatcagg
     5881 atggctctcg aactgaagtg ccgcgccatg ccgcgcgacg aggcggcgtc gcgcgttgaa
     5941 caaatcatcg aactgatcgg attgaaagga tttgagcggc atttcccggc gcagttgtcg
     6001 ggcggcatgc gcaagcgggt ggcattggcc cgcacattga tttacgaacc cgagacgctg
     6061 ctgatggacg agccgttcgg cgcgctcgac gcgcagctca aactgctgat gcttcatgaa
     6121 ctgcagaaac tgacgcagct tcgccgcatg accg
//
LOCUS       DATAVD010001383         1855 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3108010, whole genome shotgun sequence.
ACCESSION   DATAVD010001383 DATAVD010000000
VERSION     DATAVD010001383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1855
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3108010"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..239)
                     /locus_tag="VHX39_26485"
     CDS             complement(<1..239)
                     /locus_tag="VHX39_26485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body protein"
                     /protein_id="HEX3994739.1"
                     /translation="MGLTQALATSASGLRVVQAGISLVSSNVANAQTPGYVRKTLVTQ
                     STAAGQGTIGVQATGVQRELSQYVQAQYRTESAGGA"
     gene            complement(303..1676)
                     /locus_tag="VHX39_26490"
     CDS             complement(303..1676)
                     /locus_tag="VHX39_26490"
                     /inference="COORDINATES: protein motif:HMM:TIGR03506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein"
                     /protein_id="HEX3994740.1"
                     /translation="MGIFDALTNAVTGLQAQSYALDNISGNIANSQTTGFKRIDTSFE
                     DLIPDTSLNQQAAGSVLAFSRATNNVQGDVQTMTVPTYMAINGSGYFTVEKPSGTVDS
                     NPVFDGVDLYTRRGDFTLNAQGYLVNGAGYYLMGQPIDQSTNNPSGSVPETLQFSNDL
                     LPAVATTQIQYRANLPAEPSTLDTDATVPDSNLIDPTAYSVNPLVAGTGTVVGTDVNT
                     FLAQSISGGAITAYDPTGAATNVQLRWAKTANASSGGTDTWELFYQTNSTATGSQVAW
                     QNAGTSFTFDSTGQMSPAIANQTLTGLTVDGTTLGNVSLQFGAGGVTQFSDSNGSVNV
                     NNITQNGFPAGSLQGVSINNDGRVVGAYTNGRTIDLAQISLATFNGEDFLKRMDGSTF
                     AATDESGAAHYSGGGQIVGSALEASNTDISDEFSKLIVTQQAYSANTRIITTSNEMLQ
                     DVMAMIR"
BASE COUNT          297 a          565 c          597 g          396 t
ORIGIN      
        1 gcgccgccgg cgctttcggt gcggtactgc gcctgcacat actggctaag ctcgcgctgg
       61 acgccggtgg cctgaacgcc gatcgttccc tggcctgcgg ccgtgctctg cgtgaccagt
      121 gttttgcgga catagcccgg cgtctgcgcg ttcgccacgt tcgacgagac aagcgagatt
      181 ccggcctgca cgacgcgcag gccggacgcc gacgttgcga gcgcctgagt caggcccatc
      241 gcggttcccc ctgccgagtg ctcacgacac gtcgtccatc aaagcgttcg gatgttgcgc
      301 catcagcgga tcatggccat cacgtcttgg agcatttcgt tgctggtggt gatgatccgg
      361 gtgttcgccg agtaggcctg ctgggtcacg atcagcttgc tgaactcgtc cgaaatgtct
      421 gtgttcgatg cctcgagcgc gctgccgaca atctgtccgc cgccgctata gtgggccgcg
      481 ccagattcgt cggtcgccgc aaacgtgctg ccgtccatgc gtttcagaaa atcctcgccg
      541 ttgaacgttg ccaggctgat ctgcgccaag tcgatggtcc gcccgttggt gtaggcgccg
      601 accacgcgac cgtcattatt gatcgacaca ccctgcaggc tgccggccgg aaagccattc
      661 tgcgtaatgt tgttgacgtt gacgctgcca ttgctgtcag aaaactgggt cacgccgccc
      721 gcgccgaact gaaggctgac gttgccgagc gtcgtgccat cgaccgtcag accggtcagc
      781 gtctggtttg cgatcgccgg gctcatctgt ccggttgaat cgaaggtgaa cgaggttccg
      841 gcgttctgcc atgcgacctg ggagccggtt gcggtcgagt ttgtctgata gaaaagttcc
      901 caggtgtccg tgccgccgct gcttgcattg gcggtctttg cccagcgaag ctgaacattg
      961 gtggctgcgc cggtcgggtc gtaggcagtg atcgcaccgc cgctgatgct ctgggcgagg
     1021 aacgtgttga cgtcggtgcc gacgaccgtc ccggtgccgg ccaccagggg gtttacgcta
     1081 taggccgtcg gatcgatgag gttggagtcc ggaaccgtcg cgtcggtatc cagggtggac
     1141 ggctctgccg gcagattggc gcgatattga atttgcgtgg tggcaaccgc cggcagcaga
     1201 tcgttgctga actgcaaggt ctccggcaca ctgcccgacg gattgtttgt gctctgatcg
     1261 atcggctgtc ccatcagata atagccggcg ccgttcacaa gataaccttg cgcattgagc
     1321 gtgaagtcgc cgcggcgggt atagagatcg acgccgtcga ataccggatt gctgtcgacg
     1381 gtgcccgagg gcttctcaac cgtgaaatag cccgacccgt tgatcgccat gtaggtgggc
     1441 accgtcatgg tctggacgtc gccctgcacg ttgttggtcg cgcgcgaaaa cgccagcacg
     1501 ctcccggccg cctgctggtt gaggctcgtg tccggaatca gatcttcgaa actggtgtcg
     1561 atccgcttga agccggttgt ctgcgaattg gcgatgttgc ccgagatgtt gtcgagcgcg
     1621 taggattgcg cctgcaggcc cgtcaccgcg ttggtcagtg cgtcgaaaat acccatacct
     1681 ggactcctgg atcgctacgt ccgatgcggc gggcgcactt cgcccacatc gccccgctgc
     1741 cccgtcgcaa gcggcgtgcc aagcgtttcc gctagagttt tcaggtaatt cggtgaggtt
     1801 ggcgcgaccg cgcaggccgc ttcttgccgc ccgcgcggca aaaactgccg catcg
//
LOCUS       DATAVD010001384         2217 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_316649, whole genome shotgun sequence.
ACCESSION   DATAVD010001384 DATAVD010000000
VERSION     DATAVD010001384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316649"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(179..2017)
                     /locus_tag="VHX39_26495"
     CDS             complement(179..2017)
                     /locus_tag="VHX39_26495"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX3994741.1"
                     /translation="MDLWNLLEDALADRGNAVMLLAHPRDGENAVIQAGNGPFARIVG
                     WPSGRVAGTRLLELRPLVERAEDWTTLIAAVRSLSALALDLRLRVKGKEVWLGFNLTF
                     RTDPAGGDGYGILIGRDITETREHKLRETESQRLLASVFLRIGAAVAIIDSNSAILMA
                     NPACHQLLGYGPGEMTGKHVEHMIAPESAQAVQAARSRQLGGAGDYVLRIALLAKGGA
                     QVLVTLHSTLLRDARDRQLRVATLIPDSGLHADPPADTSEQTGQMRAVSLAALKAAHG
                     KEWPLIATSAMRLSEQILKRHLGVADVLRRRNDHDFLIWFNGSNETRNEAALAAATRE
                     IRLRLLQDFDDVPLDTVSIGAEAIPDGQPAPPTNSHDGLDLEFEDDERPTPERDPDAL
                     MQYLRAGTVAEVESVTGRDGVERPVVLVDFEPSVRGCLYHLMPRLSHEPNLGTGFDLM
                     RLDLAVQVLARQSGDTSVLVPVSWPAVADPDCRQLLDRHLAQIGQSSRSRIMFAVSGV
                     PRLLSKQRWSDAVAALRRQLGDVGLLLSHREGELAAMLNTITSEWPLSLLVIDRTEGP
                     PVQIEDYRSLFAAARRREISVLVRTTARNDLGEWRKLGATMFAAAA"
BASE COUNT          422 a          736 c          672 g          387 t
ORIGIN      
        1 catgctgggt gtgtgtatgc caccggtgat ggcgcagctg atgataacct tggccatggc
       61 gttgttccct ccgcgagcaa ttccgcaaca tgtgccatgc ggcggcggcg gcgttaaccc
      121 cccggtcagg ctggcccggg ccgcggcatt tggcggcagg gtgacgcatt aagacgcatc
      181 acgctgcggc ggcaaacatc gtggctccga gtttgcgcca ttcaccaagg tcattccgcg
      241 ccgtggttcg taccagcacc gaaatctcgc gtcgccgcgc cgctgcgaac aggctgcgat
      301 aatcctcgat ttgcaccggc ggtccttcag tccggtcaat gaccagcagc gacaatggcc
      361 attcgctggt gattgtgttc agcattgccg caagctcccc ctcgcggtgg gatagcaaca
      421 acccaacatc gccgagttgg cggcgcaacg cagcaaccgc gtctgaccaa cgttgcttgc
      481 tcaacaaacg cggcacgcca gagacggcaa acatgatacg cgaccgcgaa ctttgcccaa
      541 tctgggccaa atgccggtca agtaattgcc ggcaatccgg gtccgccacc gccggccagg
      601 aaaccggcac cagaacactg gtatccccgc tctgcctggc cagcacctgg accgcgagat
      661 ccagccgcat caggtcgaac ccggtaccaa ggttgggttc atgcgagagg cgcggcatca
      721 ggtgatagag acagccacgc accgatggtt cgaaatcgac aagaacgacc ggtcgctcga
      781 caccgtcccg accggtcaca ctctcgacct ccgcgacagt gcccgcacgc agatattgca
      841 tgagcgcatc gggatcacgc tccggtgtcg gccgttcgtc gtcctcgaat tccaggtcca
      901 gcccgtcgtg cgaattcgtg ggcggtgccg gctgtccatc cgggatcgct tcggcgccga
      961 tcgagacagt atcgagcggg acatcgtcaa agtcctgcag caggcgcaga cggatctcgc
     1021 gggtggctgc cgccaacgcg gcttcattgc gcgtttcgtt cgaaccgttg aaccagatca
     1081 ggaaatcatg gtcattgcga cgccgcaaca catccgcaac accgagatgt cgtttgagga
     1141 tttgctccga cagcctcatt gcgctggtgg cgatcagcgg ccattccttg ccatgggccg
     1201 ccttgagcgc ggcgaggctg acggcccgca tttggccggt ttgctccgac gtgtctgcgg
     1261 gcggatcggc gtgcagcccg gaatcgggga tcagcgtggc cacccgcaac tgccgatcgc
     1321 gtgcatcgcg cagcaaagtc gagtgcagcg ttaccagaac ctgtgcgccc cctttcgcca
     1381 atagtgcgat ccgcagcacg taatcgccgg cgccacccaa ttgcctgctt cgagcggcct
     1441 gcacagcctg ggccgactcg ggcgcaatca tgtgttcaac gtgcttaccc gtcatttccc
     1501 ccgggccgta gccgagcaat tgatggcacg ccggattggc catcagaatg gcgctattgc
     1561 tatcgatgat cgcgaccgcc gcgccgatgc gcaggaatac cgacgcgagc aggcgctgcg
     1621 actcggtttc ccgcagcttg tgctcgcgcg tttcggtgat gtcgcggccg atcaggatgc
     1681 cgtacccgtc gccgccggct ggatcggtcc tgaatgtgag gttgaagccc agccaaacct
     1741 ctttgccctt cacccgcaac cgaagatcga gcgccagcgc cgagagcgac cgaaccgcgg
     1801 cgatcaaggt ggtccaatct tccgcccgct cgaccaaggg gcgcagctcc agcagacgcg
     1861 tgccggcgac gcgacccgac ggccaaccca ctattcgggc gaagggacca ttgcccgcct
     1921 ggatcaccgc attctcgccg tcgcgggggt gggcgagcag catcaccgcg ttgccacggt
     1981 cggccagggc gtcctcaagc agattccaca agtccatagg tgtacacgtc cgcgtctgcg
     2041 aacagcatgc accgtaccgg ttaacgaacc atgaacgatt cgaggacgcg aacgatcagg
     2101 cggccttcgg caacgccagc ccacacgcat cgaaagcgct gaataacgcc gtctgctgcg
     2161 ccgcggtcaa cgccaggtgc ggcgggcgga tgttgttcca acgcgcatca ccggtgt
//
LOCUS       DATAVD010001385         2273 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2363893, whole genome shotgun sequence.
ACCESSION   DATAVD010001385 DATAVD010000000
VERSION     DATAVD010001385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2363893"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(127..834)
                     /locus_tag="VHX39_26500"
     CDS             complement(127..834)
                     /locus_tag="VHX39_26500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3994742.1"
                     /translation="MAELLGVRNVIAGYGATVVLDSVSFAVDAGATLAVLGRNGVGKT
                     TLLTTILGHTTQHAGSIAFAGQSIEQLKPYRRARLGIGTVPQEREIFPSLTVEENLTV
                     AARGGIGWTLERIYALFPNLAERRRGMGNQLSGGEQQMLAIARALMGNPSLLLLDEPL
                     EGLAPVVVDRLLEALQHLRSQTQLTMLLTEQHARLALEFSDQAIILDRGRIVYAGSAE
                     ELLKDPERLSTLIGVAR"
     gene            complement(827..1558)
                     /locus_tag="VHX39_26505"
     CDS             complement(827..1558)
                     /locus_tag="VHX39_26505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3994743.1"
                     /translation="MTAALETVGLAKQFGALGVANDIHFRLQPGARHALIGPNGAGKT
                     TLVNLLTGRLAPSAGRILLNGEDVTRLSQAARARRGLARTFQINNLFPALTVLENVRL
                     AVAEHRGLFTARRALIEEGFAILARLGLADVASSVVRELPYGKQRLVEIAIALAAEPS
                     VLLLDEPAAGVPGGESGIIFDVIAQLPAAMAVLMIEHDMDLVFRFAQRITVMVRGSIL
                     VDGTPGEIAADPRVREVYLGTRAHG"
     gene            complement(1555..>2273)
                     /locus_tag="VHX39_26510"
     CDS             complement(1555..>2273)
                     /locus_tag="VHX39_26510"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3994744.1"
                     /translation="IHVSQEPLSGLLVAATSAALVGAVSGLVILRTHGLAQLMLTLAF
                     ATLLAEAANKAGSITGGNDGLQGIAIDPIAGLFRFDMFGRTGYLYCLIVLFCAWLLLR
                     VLLASPFGQSLVGIRENVTRMRAIGAPVGGRLLIAYTIGAALAGIAGGLLAQTTQFVG
                     QSVLSFDRSGEIVIILVFGGVGRIYGAFIGAAVYMIAQDQLAKSEPEFWNFWIGLILV
                     LTVLFARGGILGVIDRVRGR"
BASE COUNT          483 a          752 c          653 g          385 t
ORIGIN      
        1 ggtccccgga acaagtccgg ggatgacgat tgagtgtgtc acaattcaac gaatctggat
       61 cctggatgca gctcgatcgt aaccggagat cgtactggcc ggcgacacct ctcgttttcg
      121 cgggcactat cgggccacgc cgatcagcgt ggacaatcgt tccggatcct taagtaattc
      181 ctccgccgac ccggcataaa cgatccggcc gcgatccaaa atgattgcct gatcgctgaa
      241 ttccagtgcc agcctcgcat gttgctctgt cagcagcatg gtcagttgcg tctgggaccg
      301 cagatgctgc aatgcctcca gcaagcggtc gacaacgacc ggtgccagcc cctccaacgg
      361 ttcgtcgagc aacagcaacg acggattgcc catcagcgcg cgagcgatcg ccaacatctg
      421 ttgctcaccg ccagataatt gattgcccat gccgcggcgc cgctcagcga ggttagggaa
      481 caatgcgtaa attcgttcca atgtccaacc gatgccgccc cgtgcggcaa cggtcaggtt
      541 ctcttccacc gtcagcgacg gaaaaatctc ccgctcctgc ggcaccgtgc cgataccaag
      601 ccgcgcccgc cggtacggct tcagttgctc gatcgattgg ccggcgaatg caatgctgcc
      661 cgcatgctgt gtcgtgtgac cgaggatcgt cgtcagcagc gtggttttgc caacgccgtt
      721 gcggcccagt actgccaaag tcgctcctgc atcaaccgca aacgagacac tgtcgagcac
      781 gacggtggcg ccatatccgg cgatgacatt tcgcacgccc aacaactcag ccatgcgctc
      841 tggtcccgag atacacctcg cgcacccgcg gatcggcggc gatttcgcct ggcgtgccgt
      901 cgaccagaat actgccgcgg accatgaccg tgatgcgttg agcgaaacga aacaccaggt
      961 ccatgtcgtg ttcgatcatc aagactgcca tcgcggccgg cagttgcgcg atgacatcga
     1021 agatgatgcc gctctcgccg ccgggaaccc cggctgccgg ttcatcgagc aacagcaccg
     1081 atggctctgc cgccaatgcg atggcgatct ccacgaggcg ctgcttgccg taaggcagtt
     1141 cgcgcaccac gctcgaggca acatccgcca gaccgaggcg ggcgagaatg gcaaagccct
     1201 cctcgatcaa tgcgcggcgt gcggtgaaca ggccgcggtg ttcggcgacc gcgaggcgga
     1261 cgttttccag cacggtcagc gccggaaaca ggttattgat ctgaaacgtt cgcgccagtc
     1321 cacggcgagc gcgcgccgcc tggctgagcc gggtcacatc ctcgccgttc aacaggatcc
     1381 ggcctgccga cggcgccagc cgcccggtca acaaattcac cagggtcgtc ttgccggcac
     1441 cgttcgggcc gatcagcgca tgacgtgcgc cgggttgcag ccggaaatga atgtcgttgg
     1501 ccacccccag cgcaccaaat tgtttcgcaa gcccgacggt ttccagcgcc gccgtcatcg
     1561 gccacgcacc cggtcgatca ctccgagaat gccacctctg gcaaacaata cagtcagcac
     1621 caggatcaat ccgatccaga agttccagaa ctcgggctcg ctttttgcca gctgatcctg
     1681 cgcgatcata taaaccgcgg cgccgataaa ggccccgtag atgcggccga cgcctccgaa
     1741 taccagaatg atgacgattt cgccggagcg atcgaaactc aacacgctct ggccaacgaa
     1801 ctgcgtggtt tgtgcgagca agccgccggc gatcccggcc agcgcggcgc caatggtgta
     1861 ggcaatcaac agccggccgc cgaccggcgc gccgatcgcc cgcatccgag taacgttctc
     1921 gcggattcca accagtgact gaccgaacgg cgacgccaac aacacccgca gcagcagcca
     1981 cgcacagaac agcacgatca ggcaataaag atagccggtg cggccgaaca tgtcgaagcg
     2041 aaacaggccg gcaatcggat cgatcgcgat cccttgcagc ccatcgttgc cgccggtgat
     2101 agagccggct ttgttcgctg cctcggcgag caaggtggcg aacgccaatg tcagcatcaa
     2161 ctgcgccaat ccgtgcgtac gcaaaatgac aaggccggag acggcgccga ccaatgctgc
     2221 cgacgttgct gcaaccaaca gaccggacaa cggttcctgc gagacgtgga ttg
//
LOCUS       DATAVD010001386         1963 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_691356, whole genome shotgun sequence.
ACCESSION   DATAVD010001386 DATAVD010000000
VERSION     DATAVD010001386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1963
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_691356"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..371)
                     /locus_tag="VHX39_26515"
     CDS             complement(<1..371)
                     /locus_tag="VHX39_26515"
                     /inference="COORDINATES: protein motif:HMM:NF015669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HEX3994745.1"
                     /translation="MAALALAAGTLAAFPARAQDEFPFGFEMTLDTANQPGTKRLPTL
                     EIGENGEAKLDLWCKSGTGQFSVAGNTVIFVPGPMEERACSPERAAIDDDLLATLSAA
                     TNWKRQNDLVSFIGAKPLRFQ"
     gene            762..>1963
                     /locus_tag="VHX39_26520"
     CDS             762..>1963
                     /locus_tag="VHX39_26520"
                     /inference="COORDINATES: protein motif:HMM:NF017775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1904680 - peptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SbmA/BacA-like family transporter"
                     /protein_id="HEX3994746.1"
                     /translation="MNNIRSTLSAVWRISIPYFNSEDKWAGRGLLAAVIAIELATVYL
                     TVLFNKWNNVFYNALQERNQAVFTYQIGYFCVLAAFWVGLKVYQLYLNQWLQIRWRNW
                     MTTRYLGGWLHDANHYRMQLLGDAADNPDQRIADDTQRFVEQTLALGIGLLSAVVTLA
                     SFIIILWTLSNEAPLHLFGRDIPIPGYLVWAALIYAVVGTTLTHLIGWPLVGLNFQQQ
                     RYEADFRFNLVRVRENSEQIALLQGEPVERTRLQGRFGLVVQNWLSIMQRTKKLTAFT
                     ASYSQASVIFPYVLIGPAYFADKVQLGGMMQALSAFTSVQDSLSFFITAYRTLAEWQS
                     VVARLSGFETSIKNADALAIKDNIIHVAASDKANIDLEKLVVSLPSGVPLVTADGFNI
                     RRGERTLLT"
BASE COUNT          363 a          630 c          580 g          390 t
ORIGIN      
        1 atctggaagc gcaacggctt cgctccgata aacgagacga gatcgttctg gcgtttccag
       61 ttggtggcgg cacttaaggt cgcgagcaga tcgtcgtcga tcgcggcccg ctccggcgag
      121 caggcgcgct cttccatcgg accgggaaca aagatcacgg tattgcccgc gaccgaaaac
      181 tgaccggtgc cgcttttgca ccagagatcg agcttggctt cgccattctc gccgatctcg
      241 agcgttggaa gccgcttcgt gcccggctga ttggcggtat cgagtgtcat ttcaaatccg
      301 aacgggaact cgtcctgggc gcgggccggg aatgcggcca gcgtgcctgc ggccagtgcc
      361 agggcagcca cggaacgtcg caaaaacctc gtcattgaaa acatgccgcc tctcgaatgg
      421 cccattgcta ccgcgcgctt tctacgggac ggccgccacg atgatcaacc gccgcgtcgg
      481 caattcgaag attcgattgc agtgtggatg gtcggaaccg ggtggcaccg ccgcggacac
      541 gtcgcgctac cggaatcgag cgagaatccg gtgacgccgg ggtccgctca caacctcgcg
      601 aagtccaaag gccccgcccc ccagccgttg cgcgcatgct agggtccact tggaggcggc
      661 gacacgcgaa cccgggcaag tccccgcgac tttggtataa cgctgccaat ttcctaccta
      721 tttcaggcct ttgacgccac gttttccgga gacgatcatc tgtgaacaac atccgctcca
      781 cgctctccgc cgtatggcgg atctccatcc cgtatttcaa ctccgaggac aaatgggccg
      841 gccgcggcct gctcgccgcg gtgatcgcca ttgaactggc gactgtttac ctgaccgttc
      901 tgttcaacaa atggaacaat gttttctaca atgcgcttca ggagcgcaac caggcggtct
      961 tcacctacca gatcggctat ttctgtgttc tggccgcgtt ctgggtcgga ctgaaggtct
     1021 accagctcta cctcaatcag tggctgcaga ttcgctggcg gaattggatg acgacccgct
     1081 atctcggcgg ctggctgcac gacgccaatc actaccggat gcagttgctc ggcgacgccg
     1141 ccgacaaccc cgatcagcgc atcgccgacg acacccagcg cttcgtcgag cagacccttg
     1201 cgctcggcat cgggttgctg agtgcggtgg tcacgctcgc ctcgttcatc atcatcctgt
     1261 ggacgctgtc caacgaagcg ccgctgcatc tgttcgggcg cgacattccg atccccggct
     1321 atctggtctg ggccgccctg atctatgcgg tggtagggac gaccttgacc catctgatcg
     1381 gctggccgct ggtcgggctc aatttccagc agcagcgcta tgaggccgat tttcgcttca
     1441 acctggtccg cgtgcgcgaa aacagcgagc agatcgcatt gctgcagggc gagccggtcg
     1501 agcgcacacg gctgcaggga cggttcgggc tggtggtcca gaactggctc agcatcatgc
     1561 agcggaccaa gaagctgacc gcctttaccg cgagctattc ccaggcctcc gtgatcttcc
     1621 cctacgtgct gatcggaccg gcttatttcg ccgacaaggt tcaactcggc ggtatgatgc
     1681 aggcgctctc ggccttcacc agcgtgcagg attcgctgtc gttcttcatt acggcgtacc
     1741 ggacgctggc cgaatggcag tccgtggtcg cccgcctcag cggctttgaa acctcgatca
     1801 agaatgccga cgcgctcgcg atcaaggaca acatcattca cgtggcggcg agcgacaagg
     1861 ccaatatcga cctcgagaag ctcgtggtca gcctgcccag cggtgtcccg ctggtgacgg
     1921 ccgatggctt caacatccgg cgcggcgaac ggaccctgct gac
//
LOCUS       DATAVD010001387         3743 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2554827, whole genome shotgun sequence.
ACCESSION   DATAVD010001387 DATAVD010000000
VERSION     DATAVD010001387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3743
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2554827"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..631)
                     /locus_tag="VHX39_26525"
     CDS             complement(<1..631)
                     /locus_tag="VHX39_26525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013541011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3994747.1"
                     /translation="MIIDVHGHYTTAPKALETWRNRQIAGIADPSAKPKVSDLKISDD
                     ELRDSIVTNQLAKMQERGSDLTIFSPRASFMAHHIGDFSVSSTWASICNELCYRVSQL
                     FPDSFVGAAMLPQSPGVDPKTCIPELERCIKDYGFVGINLNPDPSGGHWTSPPLSARH
                     WYPIYEKMVEYDIPAMVHVSTSCNECFHTTGAHYLNADTTAFMQCLTSDL"
     gene            905..2134
                     /locus_tag="VHX39_26530"
     CDS             905..2134
                     /locus_tag="VHX39_26530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3994748.1"
                     /translation="MRISHWNALLGVAFGCALAAPLAHAADPIKIGVIAETSAISGVG
                     IPNAAKMAADEINKAGGVNGRMIEIVSYDDHNSATDAVRAFQRAAQEDKVSAVIASYI
                     SEVVLALEPWAGRLHMPMITPGAASNDITKRVHDDYDHMKYVFHGYLASTQIADIVCN
                     ASKDLMVDDLHMKTAVVMSEDAAWTIPLDAEYLKCLPASGLKVVDHIRLSPDTTDFTP
                     IFNKIEGDKPDVIVTGISHVGVQPTVQWQQQQVPMPMYGVSSQATNATFWKDTNGATD
                     GVIFNSVAAPDVAVTPKTIPFANAYKAKYGSLPGYAAYQSYDDVFMWADAIRKAGGTN
                     PDKMVSAMEKTDYVGTIGRIEFLPKTDTFAHGMRIGKGFISGLMVQWQKGKQVTIWPA
                     NVATGKMIFPAFTKLPK"
     gene            2199..3074
                     /locus_tag="VHX39_26535"
     CDS             2199..3074
                     /locus_tag="VHX39_26535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3994749.1"
                     /translation="MLALQILIDGFAISSLYALGAIGFTLIFGVSGVLNLSHGAIMVV
                     AAVVAWWVAGTFGANPYMGALAGLAASLVCAFITYGVIVRPIQKSPSIPHEEKEIFVL
                     TATLLWGIMLQEAVAYLFTNNPKTVRPLVEGVVHILGVRTPWNEVLTAVVSLGAIGLL
                     YLLVNRTRTGKTLLAASMNPRGLTLLGFELSNIYILVWAIYGLLAGGAGVLLGAFLGV
                     SSDNAGTLTASAFSIVVLGGLGSVSGSLIAAFVVGYLETVTAYLVNPSIRTVPALLLL
                     IIVVYVRPQGLLGRR"
     gene            3078..>3743
                     /locus_tag="VHX39_26540"
     CDS             3078..>3743
                     /locus_tag="VHX39_26540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3994750.1"
                     /translation="MLKSRTFQVVVPALLVLILLPLGVNGYILGLLTLAYYYAVFAMS
                     WDLLFGFAGEVNFGPSFLIGIGAYTAALLNHYWSWPIPPCLVAGAFAAVVAGAVLAIP
                     ALRLTGPYFGLITLVAVLLLQNVLVLFAGITGGEIGLDLPDVLSIDDATNYYYALAFM
                     TVSGAILYGLAQSPVGLILQASGQDAIEASALGFNVAKHKLAAFCISAFFSGLAGAML
                     IFYL"
BASE COUNT          642 a         1124 c         1218 g          759 t
ORIGIN      
        1 acaggtccga ggtcaggcat tgcatgaatg cggttgtatc ggcattcaga tagtgcgcgc
       61 cggtggtatg gaagcattca ttgcaactgg tgctgacatg caccatcgcc ggtatgtcgt
      121 attcaaccat tttttcgtag atcggatacc agtgccgagc ggaaaggggc ggcgaggtcc
      181 agtggccgcc tgagggatcg gggttcaggt tgatgccgac gaagccgtag tccttgatgc
      241 accgctccag ttccgggatg caggttttcg gatcgacgcc cggcgactgc ggcagcatgg
      301 cggcgccgac gaaactatca ggaaacaact gactgacccg gtagcacagc tcgttacaga
      361 tcgaggccca ggtcgaggac accgagaagt cgccgatgtg atgggccatg aaactggcgc
      421 gcgggctgaa gatggtcagg tcgctgccac gctcctgcat tttcgccaat tggttggtga
      481 cgatgctgtc gcgcagttcg tcgtcgctga tcttcaggtc gctgactttg ggcttcgccg
      541 acgggtcggc aatcccggcg atctggcggt tgcgccatgt ttccaacgct ttgggggcgg
      601 tggtgtagtg cccatgcacg tcgatgatca ctggtgtctc cctcctgttc gacggccggc
      661 gcgtgaccgg cgttgctgct attgtgccgg tccggcgcgt tccgcgccac accccccaag
      721 cggcgtcacc acaactgtcg tccgtccgga ccggggggag cgttgcattc ctgtccaatt
      781 cgtaaggtcg gcgtgcattt ttgtcgcgca accgggttgc gtcgccgaac aggatcaagc
      841 attgaggggt gtcgcaatac tgtcagattg tccaggtaga gatatgataa aagggaaacg
      901 aatcatgcgg atttcgcact ggaatgcctt gctcggtgtg gcattcggtt gtgcgctggc
      961 ggcgccactc gcgcacgcgg cggacccgat caagatcggt gtgatcgccg agacctcggc
     1021 gatcagcggc gtgggcattc ccaacgccgc caagatggcc gccgatgaga tcaacaaggc
     1081 cggcggcgtg aatggccgca tgatcgagat cgtctcctac gacgaccaca actcggccac
     1141 cgatgcggtc cgggcgttcc agcgcgccgc gcaggaagac aaggtcagtg ccgtcatcgc
     1201 cagttacatc agcgaagttg tgctggcact ggaaccgtgg gctggtcggc tgcacatgcc
     1261 gatgatcacg cccggcgcgg cgagcaacga cataaccaag cgcgtgcatg acgactacga
     1321 ccatatgaag tacgtgttcc atggctatct ggcctcgacg cagatcgccg atatcgtgtg
     1381 caatgcctcg aaagacctga tggtcgacga cctgcacatg aagaccgcgg tggtgatgag
     1441 cgaggatgcc gcctggacga tcccattgga cgccgaatac ctgaaatgcc tgccggccag
     1501 cgggctgaag gtggtcgacc atatccgcct gtcgccggac accaccgact tcacaccgat
     1561 cttcaacaag atcgagggcg acaagccgga cgtcatcgtc accggcatca gccatgtcgg
     1621 cgtgcagccg acggtgcagt ggcagcagca gcaggtgccg atgccgatgt acggcgtgtc
     1681 cagccaggcc accaacgcga cgttctggaa agacaccaac ggcgcgaccg atggggtgat
     1741 cttcaactcg gtggcggcgc cggacgtggc ggtgacgccg aagaccattc cgttcgccaa
     1801 tgcttacaag gcgaagtatg gcagcctgcc gggttacgcg gcctatcagt cctatgatga
     1861 cgtgttcatg tgggccgacg cgatccgcaa ggcgggtggc accaaccccg acaagatggt
     1921 ctcggcgatg gaaaagaccg actatgtcgg caccatcggg cgcatcgaat tcctgccgaa
     1981 gaccgatacc ttcgcccacg gcatgcggat cgggaagggc ttcatttccg ggctgatggt
     2041 gcaatggcaa aagggcaagc aggtgacgat ctggccggcg aatgtcgcca ccggcaagat
     2101 gatcttcccg gccttcacca agctgccgaa gtagccgtgc gtaagggcgg cccccgggcc
     2161 gcctttttct cgaagccggc gcggccggac ggagtctcat gcttgctttg cagatactga
     2221 tcgacggctt cgcgatcagc agtctctacg ccctcggcgc cattgggttc accttgatct
     2281 tcggtgtttc gggcgtcctg aacctgtcgc atggcgcgat catggtggtg gccgccgttg
     2341 tcgcctggtg ggtcgccgga acgttcggcg ccaaccccta tatgggggcg ctggccggcc
     2401 tggcggctag cctcgtctgc gccttcatca cctatggcgt gatcgtccgg ccgatccaga
     2461 aatcgccgtc gatcccgcat gaggagaagg aaatcttcgt gctgaccgcc accttgctgt
     2521 gggggatcat gctgcaggag gcggtggcct atctgttcac caacaacccg aagacggttc
     2581 gcccgctggt tgaaggggtc gtccacatcc tgggcgtccg cacgccgtgg aacgaggtcc
     2641 tgaccgcggt ggtgtcgctg ggggcgatcg ggctgttgta tctgctggtc aaccgcaccc
     2701 gcaccggcaa gacgttgctg gcggcctcga tgaatccacg cggcctgacg ctgctggggt
     2761 tcgagctatc caatatctac atcctggtat gggcgatcta cgggctgctg gctgggggcg
     2821 ccggcgtgct gctgggcgcg ttcctcgggg tcagttccga caatgccggc acactgaccg
     2881 ccagtgcatt ctccattgtg gtgctgggcg gcctcggcag tgtctccggc tccctgatcg
     2941 ccgcctttgt cgtcggttac ctggaaaccg tgaccgccta tctggtcaac ccgtcgatcc
     3001 gcacggtgcc ggcgctgctg ctgctgatca tcgtcgtcta tgtgcgccca caaggcctgc
     3061 tggggaggcg atagccaatg ctgaaatccc gaaccttcca ggtggtggtg ccggcactgc
     3121 tggtgctgat cctgctgccg ctgggtgtga acggctatat cctcgggctg ctgacactgg
     3181 cgtattacta cgcggttttc gccatgtcgt gggacctgct gttcggcttc gccggcgagg
     3241 tcaacttcgg ccccagcttc ctgatcggca tcggcgctta cacggcggca ttgctgaacc
     3301 attactggtc gtggccgatc ccgccctgcc tggtggccgg cgcgttcgcc gcggtggtgg
     3361 cgggtgcggt gctggcgatc ccggcgctgc ggctgacggg accctatttc ggcctgatca
     3421 ccctggtcgc cgtcctgctg ctgcagaacg tgttggtgct gttcgccggc atcaccggtg
     3481 gtgagatcgg gttggacctg ccggacgtgc tgtcgatcga cgatgccacc aactactact
     3541 acgcgctggc gttcatgacg gtcagcggtg caattctgta cggcctggcg caatcgccgg
     3601 tggggctgat cctgcaagcc agcggccagg atgccatcga ggcctcggcg ctgggtttca
     3661 acgtcgccaa gcacaagctg gcggcgttct gcatcagcgc gttcttttcc gggctggccg
     3721 gcgcgatgct gatcttctac ctg
//
LOCUS       DATAVD010001388         2635 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3293240, whole genome shotgun sequence.
ACCESSION   DATAVD010001388 DATAVD010000000
VERSION     DATAVD010001388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2635
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3293240"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..670)
                     /gene="fliI"
                     /locus_tag="VHX39_26545"
     CDS             complement(<1..670)
                     /gene="fliI"
                     /locus_tag="VHX39_26545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018980936.1"
                     /note="involved in type III protein export during
                     flagellum assembly; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellum-specific ATP synthase FliI"
                     /protein_id="HEX3994751.1"
                     /translation="MTNLLGLVVEVEGLTGLAAIGDRLALHARDERLIPAEVIGFRDD
                     ALQAMAYGSLDGLAHGAKALLRDRSHTMLDVASSWLGRVIDPLGNPLDQAGILFGGSS
                     PRPTRTAPPEATSRARLGPRIDLGVRALNCFTTCRQGQRLGLFAGSGVGKSTLLSMLT
                     RGTACDVVVLALVGERGREVRDFIENDLGPDGMARSVVVVATSDAPPLMRRQCAYTAM
                     TVAEH"
     gene            920..1657
                     /locus_tag="VHX39_26550"
     CDS             920..1657
                     /locus_tag="VHX39_26550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010667799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3994752.1"
                     /translation="MRVLLVEEDLLAARGITLMLKAAGAVVDQTDSGEDALELLRHYE
                     YDIVLLDLALPDIEGFEVVRRMRVARNDTPVLILSGLTMPQARVKALSLGADDFITKP
                     FDKAELLARMQAIVRRSKGFSQPTVRLGRLELNLDSREVTVDGRDVHLTGKEYSILEL
                     LVLRKGMVLTKEAFLNHLYGGMDEPEVKIIDVFVCKLRKKLARAGADGIIGTIWGRGY
                     MIREAATQEAFPAVFEPMRVPRLSPAA"
     gene            1768..2565
                     /gene="dapF"
                     /locus_tag="VHX39_26555"
     CDS             1768..2565
                     /gene="dapF"
                     /locus_tag="VHX39_26555"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEX3994753.1"
                     /translation="MVIPFVKMHGCGNDFVILDDRSCALAMTPTRAAALADRHTGVGC
                     DQLIVIEPAETADAFMRIYNPDGSEAGACGNATRCVADILMRESGRSGVVVRTISGDL
                     PALRRDDGLIQVDMGPAGLDWSDIPLARPMDTLQLDLPGEPAAVSMGNPHATFFVADV
                     EAEPIAVRGPKLEHDTLFPQRANIGFAQVIDPGTIRLKVWERGAGLTLACGSGACATL
                     VNAHRRGLTHRKARVIVDGGELEIEWRDDGHVLMTGPVATAFHGQVA"
BASE COUNT          474 a          763 c          904 g          494 t
ORIGIN      
        1 agtgttcggc gacggtcatc gcggtgtagg cgcactggcg gcgcatcagc ggtggcgcgt
       61 cggaggtcgc gaccaccacg accgatcgcg ccatcccgtc gggcccgagg tcgttctcga
      121 tgaagtcgcg gacctcccgg ccccgttcgc ccaccaaagc gaggaccacc acatcgcagg
      181 cggtcccgcg cgtcagcatc gacaggaggg tggatttgcc gacgccggag ccggcgaaca
      241 ggccgaggcg ttggccttgc cggcaggtgg tgaagcagtt gagcgcgcgt acgcccagat
      301 cgatccttgg gccgaggcgg gcacgcgagg tggcctccgg cggtgcggtg cgggtgggcc
      361 ggggcgacga tccaccgaac aggatccccg cctggtcgag cggattgccc agcgggtcga
      421 ttacccggcc cagccaggat gatgcgacgt cgagcatggt gtgcgagcga tcccgcaaca
      481 acgccttcgc gccatgcgcc aatccgtcca gcgagccgta ggccatggcc tgcagggcgt
      541 cgtcgcgaaa gccgatgacc tcggccggga taaggcgttc gtcgcgggcg tgcagggcca
      601 gacgatcgcc gatcgcggcc aggccggtca ggccttcgac ctccacgaca aggccgagga
      661 gattggtcac ggttccgctg atccgggcga gttgggtgcg gcgaaggcgg gctttgcagg
      721 cgtccacgcg atctgtgaga ttacatcctc tcattgagat tgatatgtcc aaataatact
      781 aatgttcttc atacattcgc atgcaattga ggatatatcg cctctgttga taagaaatac
      841 actaatatgt tgaaaatctg ttagccaaaa acacgctatg gtggtatacg cttattcatg
      901 ttttgttaag gagagccgga tgcgcgtcct tctggttgaa gaagacttgc tcgccgcacg
      961 cgggataacg ctgatgctaa aagccgccgg tgcggtcgtc gaccagaccg atagcggaga
     1021 ggacgcgctg gagttgttgc gacactacga atacgacatc gtgctgctcg atctcgcgct
     1081 gcccgacatc gagggcttcg aggtggtgcg gcggatgcgg gtggcgcgga acgacacgcc
     1141 ggtgctgatc ctgtccggcc tgaccatgcc gcaagccagg gtcaaggcgt taagcctggg
     1201 cgctgacgat ttcatcacca aaccgttcga caaagccgaa ttgctggcgc ggatgcaggc
     1261 gatcgtccgc cgcagcaagg ggttcagcca gcccaccgtc cgcctcggcc ggttggaatt
     1321 gaacctggac agccgggaag tcacggtgga cggccgggac gtgcatctga ccggcaagga
     1381 atattcgatc ctggaactgc tggttctgcg caagggcatg gtcctgacca aggaagcgtt
     1441 cttgaaccat ctatacggcg ggatggatga accagaggtt aaaatcattg acgtttttgt
     1501 atgtaagctg agaaaaaaac ttgcccgggc cggtgccgac gggattatcg gaacgatctg
     1561 gggccgcggc tacatgatcc gggaggcggc gacgcaggag gcgtttccgg cagtgttcga
     1621 gccgatgcgg gttccgcggc tttcacccgc tgcctgacca ggcgaggtct gcgattccgg
     1681 ggcgtccgtg atcggtgccg ggtctgatcg gacgattcac gcgccgtgga cgttccgccc
     1741 gggacgatca tgctctatat gcgcggcatg gttatcccgt ttgtgaagat gcatggctgc
     1801 ggcaacgact tcgtcatcct ggacgatcgt tcgtgtgcgc tggcgatgac gccgacccga
     1861 gcggcggcgc tggcggaccg ccataccggg gttggctgtg accagttgat cgttatcgaa
     1921 ccggcggaga ccgccgatgc gttcatgcgg atctacaacc ctgacgggtc cgaggctggt
     1981 gcctgcggca atgccacgcg ctgcgttgcc gatatcctga tgcgggaaag tggacgttcg
     2041 ggtgtcgtgg ttcgcacgat ctccggcgat ctgccggcgt tgcgccggga tgacgggctg
     2101 atccaggtgg atatgggtcc ggcggggctg gactggtcgg acataccgct ggctcgaccg
     2161 atggacacgc tgcagttgga tcttccgggc gagccggccg ccgtcagcat gggcaatccg
     2221 catgcgacgt tcttcgtcgc ggatgtggag gcagaaccta tcgccgtccg gggtccgaag
     2281 ctggagcacg acacgctgtt tccgcagcgg gccaatatcg gtttcgcgca ggtgatcgat
     2341 ccgggcacca tccggttgaa ggtctgggaa cgcggtgccg gcctgaccct ggcctgcggt
     2401 tccggcgcct gcgcgacctt ggtgaacgcg caccggcgtg gtctgacgca tcgcaaggcc
     2461 cgcgtgatcg tcgatggcgg tgagttggag atcgaatggc gcgatgacgg ccacgtgctg
     2521 atgaccggac ccgtcgccac cgcgtttcat ggtcaggtcg catgagcgtc gatatcctga
     2581 ccttcggatg ccggctgaac gcctatgaaa gcgaggtcat gcgcggccac gccgc
//
LOCUS       DATAVD010001389         2532 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3481563, whole genome shotgun sequence.
ACCESSION   DATAVD010001389 DATAVD010000000
VERSION     DATAVD010001389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2532
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3481563"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            200..655
                     /locus_tag="VHX39_26560"
     CDS             200..655
                     /locus_tag="VHX39_26560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX3994754.1"
                     /translation="MNTHQQLRDGFASLIARAGRQWRRAVDRRLQPFGLTEATWLPLI
                     YLARTPAPVRQKDLAASLVLDGSSVVRLLDALEAAGLIERREETADRRAKTITVTSRG
                     LSIIDQVEAVSRDVRNATLVGLSPDQIEVATHVLDLVCQNLAKQQDTEA"
     gene            652..2229
                     /locus_tag="VHX39_26565"
     CDS             652..2229
                     /locus_tag="VHX39_26565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX3994755.1"
                     /translation="MTASTAAPQTSRQEQATPAALSPANRLIITICTIMATLMQSLDS
                     TIANVALPYMQGTMSASQEEINWVLTSYIVAAAIMTTPTGFLAARFGRTRLFVTAVVG
                     FTSASVLCGLAQSLDEIVLFRLLQGMCGAALVPLSQSVMFDIYPVDQRGKAMALWTMG
                     VMIGPIFGPILGGYLTENYSWRWVFYINVPFGIVTACGLLIFLKETSHGKSVRLDWIG
                     FGALSLAIGAFQTMLDRGETLDWFGSPEIIAEACLAGVGLYLFLVQFSLAPKPFLSPR
                     LFADRNFVVGITLYFTMGLIMYATLALLAPYLQTLMGYPVVTAGIVLAPRGAGLMLAA
                     PLVGRLVNKISPRLLVGIGFATGALALYEMTSWTPDVSEGTMIGVGFLQGLSIGFMTI
                     PINIITYATLPAAMRTEAAGIYSLMRNLGSAIGISVTGALLETNTQVNHALIAGGVTP
                     FDRALQSGAPLRFWNPGSLHGAAMLNQEITRQSQIIAYMDDFKLMLILAIVVLPLLLL
                     ARPPRQAASPARPAAAE"
     gene            2309..>2532
                     /locus_tag="VHX39_26570"
     CDS             2309..>2532
                     /locus_tag="VHX39_26570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH pyrophosphatase"
                     /protein_id="HEX3994756.1"
                     /translation="MTLILASRPNVYSSSPLDRIATRREDPDWITEKLADPETLFVPV
                     WRTRNLVRTTDDGTPEAVYLSGATAHALRM"
BASE COUNT          444 a          957 c          708 g          423 t
ORIGIN      
        1 cgttcgacgt tgcctgacag cgaggcacac agaccgcctc gccctccaac cggtcaaccc
       61 cacggcccgg gccggcgccc gatcaacacc ccggaaaatg acccccaccc gataaaccag
      121 caaccgccgc ctccagccca cgactcttgc gacattagat ggcgtaccat atattgatgc
      181 accatctaat ggcccgccaa tgaataccca ccagcagctt cgcgacggtt tcgccagcct
      241 catcgcccga gccggccggc aatggcgccg cgcggtggac cgccgcctgc aacccttcgg
      301 cctcaccgag gcaacgtggc tgccgctcat ctacctcgcc cgcacccccg ccccggtgcg
      361 tcagaaagac ctcgccgcct cgctcgtcct cgacggctca tccgtcgtgc gcctgctcga
      421 tgcgctggaa gccgccggcc tcatcgaacg ccgcgaggaa accgccgacc gccgcgccaa
      481 gaccatcacc gtgaccagcc gaggcctatc catcatcgat caggtcgaag ccgtctcacg
      541 cgacgtccgc aacgccaccc tcgtcggcct gtcccccgac cagatcgaag tcgccaccca
      601 cgtgctggac ctcgtctgcc aaaacctcgc caaacagcag gacaccgagg cgtgacggcg
      661 tccaccgccg ccccccaaac cagccggcag gaacaggcaa cgcccgccgc gctaagcccc
      721 gcgaaccgcc tcatcatcac gatatgcacc atcatggcga cgctgatgca gtcgctcgac
      781 agcaccatcg ccaacgtcgc gctgccctac atgcaaggaa cgatgtcggc gagccaggaa
      841 gagatcaact gggtgctgac cagctacatc gttgcggcag caatcatgac gacgcccacc
      901 ggtttcctcg ccgcgaggtt cggccgcacc cgcctgttcg tgaccgccgt cgtcgggttc
      961 acgtcggcct cggtcctgtg cggcctggcg caatcgctcg atgaaatcgt gctctttcgc
     1021 ctgctgcaag gcatgtgcgg cgccgccctc gtgccgctct cgcagtccgt gatgtttgac
     1081 atctatccgg tcgaccagcg cggcaaggcg atggcgctgt ggaccatggg cgtcatgatc
     1141 ggcccgattt tcggccccat cctgggcggc tacctcaccg agaactacag ttggcgctgg
     1201 gtcttctaca tcaacgtccc cttcggtatc gtaacggcct gtggactgct gatcttcctg
     1261 aaggaaacat cgcacgggaa atcggtccgg ctggactgga tcggcttcgg cgcgctcagc
     1321 ctcgcgatcg gggcgttcca gaccatgctc gaccgaggcg agacgctgga ctggttcggt
     1381 tcaccggaaa tcatcgcgga agcatgcctg gccggagtcg gcctgtactt gtttctcgtc
     1441 cagttttccc tcgcacccaa acccttcctg tcacccagac tgttcgccga ccggaacttc
     1501 gtcgtcggga tcaccctcta cttcaccatg gggctgatca tgtacgcgac cctggccctg
     1561 ctggcgccct acctgcagac cttgatgggc tatccggtgg tgaccgccgg tatcgtcctg
     1621 gcgccacgcg gcgccggact gatgctggcc gcgccgctgg tcggccggct ggtcaacaag
     1681 atcagccccc gcctgctggt cggcatcggc ttcgccaccg gggccctggc gctgtacgaa
     1741 atgacgtcct ggacccccga cgtgtcggag ggaaccatga tcggcgtcgg ctttctgcaa
     1801 ggcctcagca tcggcttcat gaccatcccg atcaacatca tcacctacgc gacgctgccg
     1861 gccgccatgc ggaccgaggc ggcgggcatc tacagcctga tgcgcaacct cggcagcgcc
     1921 atcggcattt ccgtgaccgg cgccctgctg gaaacgaaca cccaggtcaa ccacgcgctg
     1981 atcgccggcg gggtgacgcc gttcgatcgc gccctgcaat ccggtgcccc cctgcgcttc
     2041 tggaatcccg gctccctcca cggtgccgcg atgctgaacc aggagatcac gcggcagtcc
     2101 cagatcattg cctatatgga cgatttcaag ctgatgctga tcctcgccat cgtcgtgctg
     2161 ccgttgctgc tgttggctcg gccgccgcgg caagccgcaa gcccggcccg gcccgccgcc
     2221 gcggaatgat gccgacagcc atgattgccc catcccccca caagtggcag ggtccgacgc
     2281 aacaaacccg aacctggaac gcccgcacgt gaccctgatc ctggccagcc gccccaacgt
     2341 ctattcctcc tccccgctcg accgcattgc cacgcgccgg gaagatccag actggatcac
     2401 cgagaagctg gccgaccccg aaacgctgtt cgtcccggtc tggcgcaccc gcaacctcgt
     2461 gcggaccacc gatgacggca cgccggaggc cgtctatctg tccggcgcca ccgcccacgc
     2521 gctgcgcatg ga
//
LOCUS       DATAVD010001390         4384 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1249450, whole genome shotgun sequence.
ACCESSION   DATAVD010001390 DATAVD010000000
VERSION     DATAVD010001390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4384
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1249450"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..638)
                     /locus_tag="VHX39_26575"
     CDS             complement(<1..638)
                     /locus_tag="VHX39_26575"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994757.1"
                     /translation="MSQQSDRVDRRVWVIAAACACGALMSGLDSTMVNVSLDALSSAF
                     HVPLGTIQWVTTGYLLALALALPLSGWLVDRVGARRVFLCCFAGFIVCSMLSGSATTL
                     QLLIMCRLLQGIAGGLLAPMMQMMMARHAGRHMARVIGVAAMPIIMGTMLGPSLGGVI
                     LGVLGWRWIFFVNVPIGLISICFAWFALPRDEITSARRLDLFGFAMISPGLAL"
     gene            717..1910
                     /locus_tag="VHX39_26580"
     CDS             717..1910
                     /locus_tag="VHX39_26580"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3994758.1"
                     /translation="MPAIPLRHGAFLPPFHPMNENPAACIERDLELMQWLDRLGFDEA
                     WIGEHHSAGWELISSPELFIAVAAERTRWLRFGTGVISLPYHNPLMTANRIIQLDHHT
                     RGRIMFGAGPGLLASDALMLGIDPNTQRDRMAEALDVILRFFKGEIVTERTEWYNFVG
                     ARAHILPYTKPHPEVAVVSAVTPSGGRLAGKYGLSMICVAATNPFGYDALGANWKIAN
                     EIAAEQGKQMNPAGLRLVGPMHIAETRAQAMENVKYGFESYLGYLNNNQPRFIVPAGK
                     SAAEWFVENNYGVIGTPDDAIALIQRLYDKQGDFGAFLQQVHNWADFEQTKRSYELYQ
                     RYVMPHFSGNNRPRIASFDWCTDHREELTEKRSSAARLMFDKHEAEQREKAAMVRPVK
                     GKEAW"
     gene            complement(1918..3498)
                     /locus_tag="VHX39_26585"
     CDS             complement(1918..3498)
                     /locus_tag="VHX39_26585"
                     /EC_number="7.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HEX3994759.1"
                     /translation="MSLLDVQNLSVAFGDKRVVDDVSFTLDRGETLALVGESGSGKSL
                     TALSLLQLLPRGGRNPSGTICLDGQQMIGAAPDVLHKARGGLAGIVFQEPMTSLNPLH
                     RIGRQVAEAISLHRRLPRPALLERVVGVLEEAGFPDAAHRLDAFPHQLSGGQRQRVMI
                     AMALANDPSLLIADEPTTALDVTIQARVLALLARLKASRGLALLLITHDLRIVRRYAD
                     KVCVMKDGAIVEAGAVASLFAAPAHPYTRMLLDAVPRGVPHPLAEDAPPLLRFESVKV
                     HFPIRRGVLRRIVSVVRAVDGVSLTVREGETVGLVGESGSGKTTLALAALRLEPVQGR
                     VEFAGQDVVRLGRAAMRALRARMQIVFQDPFGSLSPRMTVGDIVAEGLGVHEPGLKRP
                     DRNQRVMEALGEVGLPAAMMERYPHEFSGGQRQRIAIARVIVLKPALVVLDEPTSALD
                     MSVQAQIISLLRDLRDRHNLAYLFISHDLKVVRALAHRVVVLRHGKIVEEGTADEIFT
                     RPREEYTKSLMQAAFDLD"
     gene            complement(3495..>4384)
                     /locus_tag="VHX39_26590"
     CDS             complement(3495..>4384)
                     /locus_tag="VHX39_26590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3994760.1"
                     /translation="RYDNAWYVPVLKDYSGDQFGPDFLPTEADYTDPDLRRTIAAKGW
                     MLWPLIHYSYDTTVTDLNVPSPAPPSWHNPLGTDDQARDVLARVIYGFRLSVLFGFSL
                     TALTSVVGVIAGALQGFYGGLTDLLGQRFIEIWSGMPELYMLIILGSLITPGFWVLLI
                     FLLLFRWMNLTGVVRAEFLRGRNLEYVRAAKALGVSDITVMWRHILPNAMVATLTYVP
                     FLLSGSVTLLSTLDFLGFGLPPGSPSLGELVAQAKSNLQAPWLGITAFVVLGGVLTLL
                     IFIGEAVRDAFDPRRLPTG"
BASE COUNT          992 a         1371 c         1269 g          752 t
ORIGIN      
        1 agggcgaggc cgggggagat catcgcgaac ccgaaaagat cgagccggcg tgcgctggtg
       61 atttcgtcgc gtggcagggc aaaccaggcg aagcaaattg agatcaggcc aatgggaacg
      121 ttgacgaaga agatccagcg ccagcccagt actcccagga tcacgccgcc caaactgggt
      181 cctaacattg tgcccatgat gatgggcatg gcggccaccc cgatgacccg cgccatgtga
      241 cgtccggcgt ggcgcgccat catcatttgc atcatcggtg ccaataagcc gcctgcgatc
      301 ccttgcaaca agcgacacat gatcagcagc tgaagggttg tggcagagcc gctcagcatc
      361 gaacacacga tgaagccggc gaagcagcac agaaacaccc gccgcgctcc gacccggtcg
      421 accagccagc cgcttaacgg cagcgccagt gccaacgcga gcaaatagcc ggtggtcacc
      481 cattggatcg tcccgagcgg cacgtgaaat gcagaactca aggcgtcgag cgaaacgttg
      541 accatcgtgc tatcgaggcc cgacatcagt gccccgcagg cgcaggcggc agcgataacc
      601 cagacccggc ggtccacacg atcagactgt tggctcatta tcccgccagg gtttgcgttc
      661 cgatgaaccc tgatatcatc ctcggatcac gatgtcccct ccggaggaac tgacctatgc
      721 ccgccatccc gctgcgccac ggcgcgtttc tgccgccgtt tcacccgatg aacgaaaatc
      781 ctgccgcgtg catcgagcgc gatctggagt tgatgcagtg gctcgatcgg ctggggttcg
      841 atgaagcatg gatcggcgag catcattccg ccgggtggga attgatcagc tcgccggagc
      901 tgttcatcgc cgtggcagca gaacggacgc gatggctgcg gttcggcacc ggggtcatct
      961 cgttgccgta tcataacccg ttgatgacgg cgaaccgtat catccagctc gaccaccaca
     1021 cgcgcggtcg tatcatgttc ggcgccggtc ctgggctttt ggcctcggat gcgctgatgt
     1081 tggggatcga tccgaacaca caacgtgatc gcatggccga ggcgctggat gtcatcctgc
     1141 gtttcttcaa gggggaaatc gtcaccgagc gaaccgaatg gtacaatttc gtaggggctc
     1201 gtgcgcatat cctgccatat acgaaaccgc atccggaagt tgcggtggtc agtgcagtga
     1261 ccccatccgg cggcagattg gcgggaaaat atggcctgag catgatctgc gtcgccgcca
     1321 ccaatccgtt tggttacgac gcgctcggtg ccaactggaa gatcgccaac gaaattgccg
     1381 ccgagcaggg caagcaaatg aaccctgccg gattgcgcct ggtgggtcca atgcacatcg
     1441 cggaaacgcg agcccaggct atggagaatg taaagtacgg gtttgaaagt tatttggggt
     1501 acttaaataa caatcagcct cggttcatcg tgccggcggg caaaagcgcg gcggagtggt
     1561 tcgtcgagaa caactacggc gtgattggca caccggacga cgcgattgct ctcatccaac
     1621 gcctgtatga caagcaaggt gacttcggcg ccttcttgca acaagtccac aactgggctg
     1681 acttcgagca gaccaaacga tcctatgagt tgtatcagcg ctacgtgatg ccgcacttct
     1741 ccggcaacaa tcgcccgcgg attgcttcgt tcgattggtg caccgatcac cgggaggaac
     1801 tgaccgagaa gcggtccagc gcggctcgcc tgatgttcga taagcacgag gccgagcaac
     1861 gcgagaaagc tgcgatggtg cggccggtta agggtaagga agcctggtaa gccgatttca
     1921 atccagatcg aacgccgcct gcatcagtga ctttgtgtat tcctcccgcg gacgggtgaa
     1981 aatctcgtcc gcggtccctt cctcgacgat cttaccgtgc cgcaacacga ccacccgatg
     2041 cgcaagagcg cgcacaacct tcagatcatg actgatgaac agataagcca gattgtgccg
     2101 gtcccgcaga tcgcgcagca gcgatatgat ttgcgcctgc accgacatat ccagcgcact
     2161 cgtcggttcg tccagcacga ccaacgcagg cttcagcaca ataacccggg caatcgcgat
     2221 acgctggcgt tggccgccgc tgaactcgtg cggatagcgt tccatcatgg cggcagggag
     2281 cccgacctcg cccagagctt ccatgacgcg ctgatttcgg tccggccgct ttaatccggg
     2341 ctcatgcacg cccaggccct cagccacaat gtcgccgacg gtcattctgg gcgacaggct
     2401 gccgaacgga tcctggaaca cgatctgcat cctcgcccgc aatgcccgca tcgctgcacg
     2461 gccaagccgg acgacatcct ggccggcaaa ctcgacccgt ccttgcacgg gttccaaccg
     2521 caacgccgcc aaagccaatg tcgttttccc ggagcctgat tcgccgacca ggccaaccgt
     2581 ctcgccttcc cgcaccgtca acgacacgcc atcgaccgcg cggactacgg agacgatgcg
     2641 gcgcaggaca cctcggcgaa tcgggaaatg tactttcaca gattcgaaac gaagcaacgg
     2701 cggggcgtct tccgccaatg ggtgtggcac gccacgcggc actgcatcca gcagcatcct
     2761 ggtataagga tgcgcgggag ccgcgaacag ggaggcaacc gcgccagcct cgacaatcgc
     2821 tccatccttc atcacgcaga ctttatcggc gtaacggcga acgatgcgca aatcgtgcgt
     2881 aatcagcaaa agcgccagtc cgcggctggc cttcaaccgc gccagcaacg ccaatacgcg
     2941 cgcctggatc gtcacgtcca gcgcggtcgt cggttcatcc gcgatcagca gcgacggatc
     3001 gttggccagc gccatcgcga tcatgacgcg ctggcgctgg ccaccggata actgatgcgg
     3061 aaacgcatcc aatcggtggg cagcatccgg aaaaccggct tcctccaaca caccaaccac
     3121 acgctccagc aatgccggcc gaggcagccg gcgatgcaac gaaatcgcct ccgccacctg
     3181 acgaccgatg cgatgcagcg ggttgagact cgtcatcggc tcctgaaaca cgattccggc
     3241 cagaccgccg cgcgctttat gcaaaacatc cggcgctgcg ccgatcatct gctgaccatc
     3301 caggcagatc gttccggatg ggttacgccc gccacgcggc aacagttgca gcagggacaa
     3361 tgcggtcagc gacttgccgg aaccggactc gcccaccaaa gcgagggttt ccccgcggtc
     3421 cagggtgaac gacacatcgt cgacgacgcg tttgtcgcca aacgcgacgg acagattctg
     3481 aacgtccagc aaactcatcc ggtgggcagc cgtctgggat cgaatgcatc gcgcactgcc
     3541 tcaccaatga aaatcaacaa ggtcagcacg ccgcccagta cgacaaatgc cgtaatcccc
     3601 agccacggag cctgtaaatt cgatttcgcc tgggccacca gttcaccaag cgacggcgat
     3661 cccggcggca gaccgaaacc cagaaaatcg agagtcgaca ataacgtcac cgatccggac
     3721 agcaggaacg gtacataggt caatgtcgca accatcgcgt tcggcagaat gtggcgccac
     3781 atgacggtga tgtccgacac gcccagtgct ttggcagccc ggacatattc gaggttgcgg
     3841 ccacgcagga actcggcgcg aaccaccccg gtcaggttca tccaacggaa caacagcaga
     3901 aagatcaaaa gtacccagaa gccgggcgtg atcaggctgc ccaggatgat gagcatgtaa
     3961 agttcgggca taccgctcca gatttcgatg aaacgctggc caagaaggtc ggtcaggccg
     4021 ccatagaatc cctgcaatgc accggcgatt actccgacga ccgaggtcaa tgccgtgagc
     4081 gagaacccga ataacaccga cagccggaat ccatagatca cgcgggcaag aacgtccctc
     4141 gcctgatcgt cggtgcctaa cgggttgtgc cagcttggcg gcgccggtga cgggacgttg
     4201 agatcggtga ccgtcgtgtc ataggaatag tgtatcagcg gccacagcat ccaacctttg
     4261 gcagcgatcg tgcgacgcag atcgggatcg gtataatccg cctcggtcgg cagaaagtct
     4321 gggccgaatt gatcaccgct gtagtctttc agtaccggaa cataccacgc gttgtcgtag
     4381 cgga
//
LOCUS       DATAVD010001391         1568 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1806858, whole genome shotgun sequence.
ACCESSION   DATAVD010001391 DATAVD010000000
VERSION     DATAVD010001391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1806858"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..964
                     /locus_tag="VHX39_26595"
     CDS             <1..964
                     /locus_tag="VHX39_26595"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010502073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HEX3994761.1"
                     /translation="QLRGELRRPDDSLVDGVDDDWDQFTDFDAYDRFTRGWLTECQRL
                     LRKDGSLWVIGAYHNIFRIGAILQDMGFWILNDVIWRKSNPMPNFRGRRFTNAHETLI
                     WAAKSRQSRHKFNYQAMKALNDDIQMRSDWLIPLCTGPERLRNQHGLKLHPTQKPEAL
                     LHRVLLASTGYDDIILDPFAGTGTTAVMARRLGRHFIAIERHPAYVEAAWGRLRRTRR
                     GSDDGIAMTPTKREAPRIPFGNLVEQGVVPPGTSLFDRQRRVTAVVGADGTVAAGETR
                     GSIHKVGAALQNAPSCNGWTFWHIERDGILVSLDTLRATALAGA"
     gene            1101..>1568
                     /locus_tag="VHX39_26600"
     CDS             1101..>1568
                     /locus_tag="VHX39_26600"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX3994762.1"
                     /translation="MDLLSSFDPRFVFSGFFVGMLIGQTGMGGGSLMTPILVLFFGVH
                     PATAVGTDLLYASATKTAGTLVHGLNHTVNWRIVARLASGSVPATVITLAVISHFNVT
                     GPTSGRIISLLLGVMLLLTALSLVFRRPFLRIVGPMLESVPPKQAARLTIIVGI"
BASE COUNT          275 a          502 c          498 g          293 t
ORIGIN      
        1 gcaactccgc ggagagctac gccgccccga cgacagcctc gttgacgggg tggatgacga
       61 ctgggaccag ttcaccgatt ttgacgcata cgaccggttc acccgcggct ggctgaccga
      121 gtgccagcgg ttgctgcgga aggacggatc gctctgggtg atcggcgcct accacaacat
      181 cttccggatc ggcgcgatct tgcaggacat ggggttctgg atcctgaacg acgtgatctg
      241 gcgcaagtcc aacccgatgc cgaatttccg cggccgccgc ttcaccaacg cgcacgaaac
      301 cctgatctgg gctgccaaaa gccgccaatc ccggcacaag ttcaactatc aggcgatgaa
      361 agcgctgaac gacgacattc agatgcgcag cgactggctg atcccgctgt gcaccggtcc
      421 cgaacggctg cgcaaccagc acggcctgaa attgcacccg acccagaagc ccgaggcgtt
      481 gttacatcgg gtcctgctcg ccagcacggg atatgacgac atcatcctcg atcccttcgc
      541 cggcaccggt accaccgcgg tcatggcccg ccgactgggc cgccatttca tcgcgatcga
      601 gcgccacccc gcctacgtcg aggcggcctg gggccggctg cgccgcacgc gccgagggtc
      661 agatgacggg atcgcgatga ccccgaccaa acgcgaggca cccaggatcc cgttcggcaa
      721 tctggtggag caaggagtcg tgccgccggg gaccagcttg ttcgaccggc agcggcgcgt
      781 cacggctgtg gtgggtgccg atggcaccgt cgccgccggc gagacacgcg gctcgatcca
      841 taaggtcggc gcggcactgc agaatgcacc ttcctgcaac ggttggacat tttggcatat
      901 cgagcgggac ggcatcctgg tctcgctcga tacgctgcgg gcgaccgcgc tggctggcgc
      961 gtaacggaag ccatgaacaa tcaggccgcg ccgtccattc gggcgcagca acgtccatgc
     1021 cgtgaccgcg ttggagcgtg ggtgcttcag attattgcga ttgcactcta agctataagt
     1081 cgaagccagg gtgattccac gtggatctgt tgtcttcctt tgacccgagg ttcgtgttct
     1141 cggggttttt cgtgggtatg ctgatcgggc agaccgggat gggcggcggc tcgttgatga
     1201 cgccgattct ggtgctgttt ttcggcgtgc atcccgccac cgcagtcggc accgacctgc
     1261 tgtacgcctc cgcgacgaag accgccggca cgttggtgca cggcctcaat catacggtga
     1321 actggcggat tgtggcgagg ctcgcgtccg gcagcgtgcc ggcaacggtg atcacgcttg
     1381 cggtcatctc gcactttaac gtcaccggtc ccaccagcgg gcggatcatc agcctgctgc
     1441 ttggcgtgat gctgttgctg accgcattgt cgctggtttt ccggcggccg ttcctgcgga
     1501 tagttgggcc aatgctggag agcgttccgc ccaaacaggc agcccgactg accatcatcg
     1561 tcggcatc
//
LOCUS       DATAVD010001392         2233 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_317467, whole genome shotgun sequence.
ACCESSION   DATAVD010001392 DATAVD010000000
VERSION     DATAVD010001392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_317467"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1018
                     /locus_tag="VHX39_26605"
     CDS             <1..1018
                     /locus_tag="VHX39_26605"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HEX3994763.1"
                     /translation="DWPAVRAYLARHGMRLDDDPPPRQFAGGLANLNYLISLDGKPAV
                     LRRPPRGELPAGAYDMAREHRILSRLPDALPFVPRSFHLCDDPSVCGQRFQILEYRPG
                     LVIRETISPTLAARPVLGARLSAVLLETIAAIHAVDTAAIGLDDLGRPDGFLARAVSG
                     WVKRGWAAKEDGTEALHQEIAHWLERNIVPDGKPGLLHNDFKLNNMILDPDTLAPVAV
                     VDWDQGTRGDPLFDFSTLLSYWIHADDPWAMHDMKQMPAVEAGLCPRREAVAAYAKLT
                     GRDVSNILFHRVITMYKLSVIFLQLGLRYRSGATTEPRYAPLTAIGTGILEFTHEIAQ
                     GRAF"
     gene            1018..2187
                     /locus_tag="VHX39_26610"
     CDS             1018..2187
                     /locus_tag="VHX39_26610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3994764.1"
                     /translation="MDFSLTPELAELQQRTRAFIRDKILPLEGDKRQTHHGPTEAFRQ
                     ELVALGREAGLLAPHVGTEWGGLGLNHVGKAIVFEEAGYSLLGPVAMHIFAPDEGNMH
                     LMEVVATQEQKERWLRPLASGATRSCFCMTEPAPGAGSDPSAMLTTARLDGNHYVING
                     EKWFITGADGAAFGIIMAKGEDGNATMFLSDMNRPGIEIVRAMDSLDSAFAGGHAVVR
                     FNNLRIPASDILGEPGKGFRYAQVRLAPARLTHCMRWLGTARRAHDIATAYARKREVF
                     GAKLVNHEGVGFMLADNEIDIRMSRLAIWHTAWLLDQGARGTTESSMAKVFCSEAIWR
                     VVDRCVQVLGGQGVTGETLVARIFNEVRGFRIYDGPSEVHRWSLAQKINRDGANW"
BASE COUNT          408 a          652 c          718 g          455 t
ORIGIN      
        1 ggattggccg gcggtgcgcg cttacctcgc gcggcatggg atgcggcttg atgacgaccc
       61 gccgccacgt cagttcgccg gtggactggc caacctcaat tacctgattt ccctggacgg
      121 caaaccggcc gtactccgcc gcccgccgag gggggagttg ccggctggcg cctacgacat
      181 ggcacgtgag caccgcattc tgtcccggtt gccggatgcg ttgccgttcg tgccgcgcag
      241 ttttcatctg tgcgatgatc cgtcggtttg cggacaacgg tttcaaattc tcgaatatcg
      301 gccgggcctg gtcattcggg aaactatttc gccaacgctt gccgcgcgtc ccgtactggg
      361 tgcgcggctg tcagccgtgt tgctggaaac cattgcggcg atccatgcgg tcgatacggc
      421 agcgattggt ctggacgatc ttggccggcc tgacggattc ctggcgcgcg cggtctccgg
      481 ttgggtcaaa cgtggttggg cggcgaaaga ggatgggaca gaggcgttgc accaggagat
      541 cgcgcactgg ctggaacgca acatcgtgcc ggatggcaaa ccgggacttc tgcacaacga
      601 tttcaaactg aacaacatga tccttgatcc ggatacgctg gcgccggttg ctgttgtcga
      661 ctgggatcaa ggcacccgcg gcgatccgtt gttcgatttt tcgacattgc tgtcgtactg
      721 gattcacgcc gacgacccat gggccatgca cgatatgaaa caaatgccgg cggtcgaggc
      781 cggcctgtgt ccgcggcgtg aagcggttgc ggcctatgca aagctgaccg gtcgcgacgt
      841 ctcgaacatt ttgttccatc gcgtgatcac gatgtacaaa ctatcggtca ttttcttgca
      901 gcttggcctg cgctaccgct cgggagccac cacggaacca cgctacgcac cgctgaccgc
      961 gatcggcacc ggcattctgg agttcaccca cgagatcgcc caaggacgcg cattctgatg
     1021 gatttttcac tgactcccga gttggccgaa ctgcagcaac gcacccgcgc tttcatccgc
     1081 gacaaaattc tgccgctgga gggtgacaag cggcagaccc atcacggtcc gaccgaggca
     1141 ttccgtcagg aacttgtggc gcttggccgc gaggccggat tgctggcacc acatgtcggt
     1201 acagagtggg gtggcctcgg gctgaaccat gtcggcaagg ccattgtctt tgaagaagcg
     1261 gggtattcgt tactcggtcc ggtcgcgatg cacatcttcg cccctgatga gggcaacatg
     1321 catctgatgg aagtggtggc gacgcaggaa cagaaggagc ggtggctgcg cccgctcgca
     1381 tccggcgcga cccgttcgtg tttctgcatg accgaaccgg ctccgggtgc cggttccgat
     1441 ccctcggcga tgctgaccac ggcgcggctg gacggcaatc attacgtcat caacggggaa
     1501 aagtggttca ttacgggggc tgacggcgct gcttttggca tcatcatggc gaaaggcgag
     1561 gacggcaacg ccaccatgtt cctgtccgat atgaaccggc ccggtatcga aatcgtccgc
     1621 gccatggaca gtctggacag tgcctttgcc ggaggccatg ccgtggttcg gttcaacaac
     1681 ctgcggatcc ctgcttccga cattctgggt gaaccgggca aagggtttcg atacgcacag
     1741 gtccggctgg cgccggctcg gctgacccat tgtatgcgct ggttaggcac cgcgcgccgc
     1801 gcgcacgata tcgccacggc gtacgcccga aagcgcgagg tgtttggtgc gaaactggtc
     1861 aatcatgaag gcgtcggatt catgctcgcc gataacgaaa tcgacatccg catgagccgg
     1921 ctggcgatct ggcacaccgc ctggctgttg gatcagggag cgcgtggcac aacggaatcc
     1981 tcgatggcca aagtcttctg ttcggaggcc atctggcgtg tggtcgaccg ctgcgtacag
     2041 gtactcggcg gccagggcgt caccggcgaa acgttggttg cgcgtatctt caacgaagtg
     2101 cgggggttcc gcatctatga cgggccctcg gaggtgcatc gctggagcct cgcgcagaaa
     2161 atcaatcggg atggagccaa ttggtgagtg cgaactttga tctcggcggg aaggtgtgca
     2221 tcgtcaccgg tgc
//
LOCUS       DATAVD010001393         2307 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3108799, whole genome shotgun sequence.
ACCESSION   DATAVD010001393 DATAVD010000000
VERSION     DATAVD010001393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3108799"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..329)
                     /locus_tag="VHX39_26615"
     CDS             complement(<1..329)
                     /locus_tag="VHX39_26615"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3994765.1"
                     /translation="MPMLQRPDGQIYYEEFGSGFPILLFAPGGLRSNLAMWHHPANGP
                     QRSWCDWTDALASKYRVVAMDQRNAGQSKCAIRGDHGWHTYAADHLALMDHLGHRKFH
                     GLGGCIGG"
     gene            complement(346..1275)
                     /locus_tag="VHX39_26620"
     CDS             complement(346..1275)
                     /locus_tag="VHX39_26620"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010666626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEX3994766.1"
                     /translation="MRIFRDWRSLPDDARGASVALGNFDGVHLGHATVLRAAHAARPD
                     APLAVLTFEPHPREVFRPDDPPFRLTLSAERADALAALGCTILYELPFNQVFSLMMAD
                     TFMGEVLHQGLDARHLTTGVDFAFGHRRGGDAGFLAARAEALGMGVTQVPAMTDAGGP
                     LSSTRIRRALQDGYPERATAELGRPWAIRGDVAHGDKRGRTIGFPTANVALGRHLEPA
                     RGVYAVTIRLADGTKYNGVANIGRRPTVSEGPESRLEVNLFDFSGDIYGTEITVALIA
                     YIRQEVRFSGLDALKAQIAADAEEARRLLSLKR"
     gene            complement(1275..1697)
                     /locus_tag="VHX39_26625"
     CDS             complement(1275..1697)
                     /locus_tag="VHX39_26625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX3994767.1"
                     /translation="MTTGYFFEDLSVGQSASLAKTITEADILLYSAVSMDTNPLHLDA
                     EAAAQGPFGERIAHGMLSAGLISAVLGTRLPGPGAIYMRQSLRFALPVKIGQTVKATV
                     EVMSLNPDKKRATLRTICTVGDELAIEGEAYVQVPSRG"
     gene            complement(1757..2218)
                     /locus_tag="VHX39_26630"
     CDS             complement(1757..2218)
                     /locus_tag="VHX39_26630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RES family NAD+ phosphorylase"
                     /protein_id="HEX3994768.1"
                     /translation="MDLWRLCRRPYADLSGEGARIYGGRWNSPGRPLVYLAEHPALAA
                     LEVRVHLDLPFELLPNDYVLVRVALPDSLVTTIDTPPGETMSVLQTVAAGDAWLAQAN
                     SVALRVPSVLMPYAWNVLLNPRHADSDQVSITGIEAFHFDTRLWEPLGGEH"
BASE COUNT          441 a          718 c          723 g          425 t
ORIGIN      
        1 ccgccgatgc agccgcccag tccgtgaaat ttccgatgcc cgaggtgatc catcaacgcc
       61 aaatgatccg cggcataagt gtgccagcca tgatcgccgc ggatcgcgca tttcgattgg
      121 cctgcattgc gctggtccat cgccacaacg cggtatttcg acgccagcgc atcggtccag
      181 tcgcaccacg aacgttgcgg tccattggcc ggatgatgcc acatcgcgag gttcgaccgc
      241 aggccacccg gagcgaacag caggatcgga aacccgctgc cgaattcctc ataataaatc
      301 tggccatctg gccgttgcaa catcggcatg tccaaacttc cccgtttatc gtttcaaact
      361 cagcaatcgc cgtgcttcct cggcgtcggc ggcaatttgc gcctttagcg cgtccagtcc
      421 ggaaaaccgg acctcctgcc tgatataggc gatcaatgcc acggtaatct cggtgccgta
      481 aatatcgccg gagaaatcga acaggttgac ctccaaccgg ctctccggac cttcgcttac
      541 cgttgggcgg cggccaatgt tggcaacacc gttatatttc gtgccatctg ccaaacgaat
      601 ggtaacggcg taaactccgc gcgcgggctc cagatgccgg ccaagcgcta cattcgctgt
      661 tggaaagccg atcgtgcggc cgcgtttgtc gccatgcgcg acgtcgcctc ggatggccca
      721 gggacggccg agttcggcgg tcgcgcgttc ggggtagccg tcttgcaggg ctcggcggat
      781 gcgggtcgat gacaatggcc ctccggcatc ggtcatggcc ggtacctggg ttacgcccat
      841 gcccaaagcc tcggcccggg cggcaaggaa acccgcatcg ccgccgcgcc ggtggccgaa
      901 ggcgaagtct acgccggtgg tcaaatgccg tgcgtcgagg ccctgatgca gcacctcgcc
      961 catgaacgtg tcggccatca tcaggctgaa cacctgattg aacggcagtt cgtacaatat
     1021 cgtgcagccc agagctgcca gggcatcggc gcgctcggcg gacaaggtca gtcggaacgg
     1081 tgggtcgtcg gggcggaata cctcgcgcgg atgcggctcg aacgtcagca ctgcgagcgg
     1141 cgcgtcggga cgcgcagcat gggctgcacg cagcacggtg gcgtggccaa ggtgcacccc
     1201 gtcgaaattg cccagagcga ccgaagcgcc gcgcgcatcg tcaggcaggc tgcgccagtc
     1261 gcgaaaaatc cgcatcagcc gcgtgagggg acctgcacgt aggcctcccc ctcgatcgcc
     1321 agttcatcgc ccacggtgca tatcgtccgc aatgtcgcac gtttcttgtc ggggttgagg
     1381 gacatgacct ctaccgttgc tttcaccgtt tggccgatct tcaccggaag cgcgaaccgc
     1441 aaactctgtc gcatatagat tgctcctggg ccaggtaggc gggtgccaag aacggcagag
     1501 atcagcccgg cagacagcat gccatgcgca atgcgttcgc caaatggccc ttgcgcggcg
     1561 gcctcggcgt cgagatgcag tggattggtg tccatgctga ctgcggaata cagcaggatg
     1621 tccgcctcgg tgatggtctt ggcgaggctc gcggattggc caaccgagag gtcctcgaaa
     1681 aaatagccgg tggtcatgag gcaattccat tgctgcgccg tgtctatctg gcgcgccttg
     1741 gcgttgggat caaccgttag tgctcgccgc ccaatggctc ccataagcgg gtatcgaagt
     1801 ggaaggcttc aattccggtg atgctgacct ggtcgctgtc tgcgtggcgg ggattgagca
     1861 ggacgttcca ggcgtagggc atcaggacgg atgggactcg caacgccacc gaattcgcct
     1921 gcgccagcca cgcgtcgccg gcggccacag tttgcagcac agacatggtt tctcccgggg
     1981 gcgtgtcgat cgtggtgacc agactgtccg gcagcgcgac acgcaccagc acataatcat
     2041 tggggaggag ttcgaatggc agatcgagat ggacgcgaac ttccagtgct gcgagtgccg
     2101 ggtgctcggc aagatacacc aacggccttc ctgggctgtt ccaccgccct ccatagatgc
     2161 gagcgccttc gccggacaaa tccgcatagg ggcggcggca cagccgccat aaatccatca
     2221 gatcgccagg ccgtgtgcga tgcggcccag aatggcttcc acctgacgcg tgccaaagtc
     2281 cgtgtcgaga cgatggagcg gggcttc
//
LOCUS       DATAVD010001394         8405 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_317757, whole genome shotgun sequence.
ACCESSION   DATAVD010001394 DATAVD010000000
VERSION     DATAVD010001394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8405
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_317757"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..731
                     /locus_tag="VHX39_26635"
     CDS             <1..731
                     /locus_tag="VHX39_26635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX3994769.1"
                     /translation="TGDEEIGSPEGRAVIETEARRARVVFNSEPGRVSGNVVTGRKGG
                     VFMNFRITGKAAHSGANFADGISAIEELACKIQAIHALTDLERGITLNVGLVSGGQSV
                     NTVAPWSEGQIDLRYVNPPDRDDVMARIGAIMERSFVPGTRTEMTVKGEFLPLTQTPA
                     AKRLFELYVQSAADTGFQTDGEFTGGCADSGFTAALGAATICAVGPVGGKAHSPDEFM
                     RIDSLVPRAQACARAIMRLETSGL"
     gene            complement(1235..2677)
                     /locus_tag="VHX39_26640"
     CDS             complement(1235..2677)
                     /locus_tag="VHX39_26640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010512932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEX3994770.1"
                     /translation="MHNNPRARELLTPDEMARVDAASPGLGVPGYRLMENAGRAVVRA
                     IQARIRPCRTLVLCGPGNNGGDGYVVARMLAQEGWPITVAGLGAPRAGSDAALARARW
                     DGINVPFTKQEVARSDLVIDAVFGAGLSRDLDPGLVQMLRAAGRLVAVDVPSGLDGAT
                     GAVRGYAPQATLTVTFFRLKPGHLLLPGRDLCGETVLADIGMPAGVLNAVQPRAFRNE
                     PGLWELPALATDAHKYARGHVTIMGGAEMTGAARFAADTARRAGSGLVTIAAAGAAAI
                     YRAGSPGTLVSEAPLADLLADRRRTVWVCVPGFGPAVARSIWPDLIAAGREVVGDADV
                     FTAFAGKPDALHGAAVLTPHAGEFARVFGPIEVDRVAAVRAAAMRTNAVVLLKGADTI
                     IARPDGMVAINASAPPWLATAGAGDVLAGLIAGLLAQGMNAWEAASAGAWLHGRAAME
                     VGPGLIAEDLANALPLAFAAAEEATRAGRV"
     gene            2824..3762
                     /locus_tag="VHX39_26645"
     CDS             2824..3762
                     /locus_tag="VHX39_26645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994771.1"
                     /translation="MNRRPDGNRTVQRLIDQSSETSADAAQGSVCHPAAQQRSSGVTS
                     AARQQVCQRSETIDRAPRSRRQGRTMMSGLEILMLVPLVERQGLIAEYVDRGGGWPVL
                     SASENAALLEFLASRLPDPSHAFSLCRMEIALTRARLGAEIFVEPEYRSVQGRSRRDI
                     QTRIEHAAWDCIERTMQRPGVTESWDHIERSVWDSVEGAIWDGIEREARGRTECEAWR
                     ILERLARNRIERGLYASLVWFHAEPEAVVGALHGDAPPPVGNPAYPILFGPGVPNLCR
                     AATPEEVVLWASLPADDTAPDLVERLLAEGIIGYTD"
     gene            complement(3804..5327)
                     /locus_tag="VHX39_26650"
     CDS             complement(3804..5327)
                     /locus_tag="VHX39_26650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="altronate dehydratase family protein"
                     /protein_id="HEX3994772.1"
                     /translation="MPPPPVIRLHPDDNVVIARVTLLPGTPLADSAAATQRIPAGHKA
                     AIRPIARGEAIRRYGQIIGFASSDIAPGQHVHVQNCEMGDFAKDYAYGVDARPTEYVN
                     PQATFRGIRRPDGRVATRNYIGIRTSVNCSAHVAGLVANMFQRNPFTGHDPLSDYPNV
                     DGVVALTHKTGCGMTQDEPLRVLRRTLAGYARHPNFSHVIVLGLGCEVNQIGGLMQEQ
                     RLAGRLRSLDIQTVGGTRKTVAAGVDFVREVLAESNSATREAVPVSALTVALQCGGSD
                     GYSGVSANPALGYASDLVVRHGGSVILSETPETYGAEHLLTRRAISKNVGEKLVALMH
                     WWEDYTKRENAEMNANPSPGNKAGGLTTILEKSLGAMAKAGSTNLVDVVQYAEEVQAR
                     GFVFMDTPGYDPVSATGQVAGGASLVCFTTGRGSVFGCKPAPSIKLATNSTMYRHIED
                     DMDVNCGSILDGDESVQECGQRIFELMLRVASGEATKSEAFDFGAAEFAPWVLGATM"
     gene            complement(5963..6742)
                     /locus_tag="VHX39_26655"
     CDS             complement(5963..6742)
                     /locus_tag="VHX39_26655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX3994773.1"
                     /translation="MPNKLKERIAAGKACINGWLAIPSGYSAEVMAGCGWDSVTVDMQ
                     HGVQDYQSMVQCFQAMDKHPITPLVRVPWNEPGIIGKSLDGGAWGIISPMCNNKAEAK
                     ALADACMYPPLGKRSNGPIRAAAYGVASSYQTTANDEVLVIPMIETQEGIDNIDEILS
                     VPGISGIYIGPSDMGFSLGLIPILDREEPLILGIYEKLLASCKKHGKFAGIHNGSASY
                     AARMVKMGFQLLTIQNDSGLMAKAAREAVAQARKEGGEKAN"
     gene            6893..7588
                     /locus_tag="VHX39_26660"
     CDS             6893..7588
                     /locus_tag="VHX39_26660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEX3994774.1"
                     /translation="MATRKTPSPAPEDSPQGHARQPDEAPAEHSLPPEMTSRRGAKAA
                     PIPEGFLTGQLLIAMPAMADPRFAQSVIYMCAHTPEGAMGLIVNRPVVKPTFDDLLKQ
                     LKVSPHPPARQIRLCAGGPVENARGFVLHTIDWTGEGSLRVNDELALTASLDVLQVIA
                     GGGGPRECILALGYAGWGAGQLDQEIQANAWLSGPADESLLFDADHDTKWRRAFAKLN
                     VDPLLLSDAAGHA"
     gene            7734..>8405
                     /locus_tag="VHX39_26665"
     CDS             7734..>8405
                     /locus_tag="VHX39_26665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994775.1"
                     /translation="MAELTPVTSLVRRSGSPGDKAQTLPYQQNADRQRHAVRNPARRT
                     WMYRTMSPRDFLAMVAGSTILLFGLVWLWIVTMPMAFLDPEYPSWRAKQLLLSSCDLG
                     DTMILGDSRAATAMMPARWRVRATNLAVGGGEPIEALAALDRALQCKVPPHQVILSFD
                     AVHFTQPDLFWERTARFGFVNASEIATLREVSQDLGDVSIYELRHTDGLPSWLRDAMY
                     RVRFPS"
BASE COUNT         1568 a         2636 c         2662 g         1539 t
ORIGIN      
        1 tcaccggtga cgaggaaatc ggcagccccg aaggccgtgc cgtgatcgaa acggaagcgc
       61 gccgcgcgcg ggtggtgttc aacagcgagc ctggccgagt ctcgggcaat gttgtcaccg
      121 gacgcaaggg cggcgtgttc atgaactttc gcattaccgg caaggcggct cactccggtg
      181 ccaacttcgc cgacgggatc agcgcaattg aggagctggc gtgcaaaatc caggcgatcc
      241 acgcactgac cgacctggag cgcggcatta cgctgaacgt cggcctcgtc agtggcggcc
      301 aaagcgtcaa cacggtcgct ccgtggtcgg agggccagat tgatttgcgt tacgtgaacc
      361 cgcccgaccg cgacgacgtg atggcgcgga tcggcgcgat catggaacgc agtttcgtgc
      421 ctggcacccg aaccgaaatg accgtgaaag gcgagttcct gccgctgacg caaacgccag
      481 cggcgaagcg gttgttcgaa ctttacgtgc aatccgctgc cgataccggc ttccagaccg
      541 acggcgagtt taccggcgga tgcgctgatt ccggctttac cgcggccctt ggtgcggcga
      601 cgatttgcgc ggtcggtccg gtcggcggca aggcgcacag tccggatgag ttcatgcgga
      661 tcgatagcct ggtcccgcgc gctcaggctt gcgcgcgggc gatcatgcgg ctggaaacct
      721 ctgggctctg aaactgttca actcagcggc gccagcccca gccccaatgt ggtccccagt
      781 gaccgggacg taccggaacc acgacacaac cgctaagcag cgtggcaaga caaagtgcgg
      841 cgataatacg tcgaagtgtg cgtgacattg aggtagctcc tgtcgtagtg aacctcacga
      901 cggaacatgg gacgaattta aggcgaattg agggtacgaa cggcgtggaa ttaaggccaa
      961 ttgtatcgaa gttttttagc tcgtggcgat aggtttccga gttgaaactc acgcccaaaa
     1021 ggccgggttt gcctcggccg cacacgagtc gagatgcaca aattcaatgc gggattttat
     1081 taactgacct taagttactt gcggatgttg cactgaatca tgcgattctg ccgccggtaa
     1141 ccgccaacgc ggctatcgat gccgatacgg aattaacccg atagctaaca gtcgtaccag
     1201 ggacctggaa cgggacggcc gccgtccgcc ggcctcatac gcgacctgca cgcgttgctt
     1261 cctccgccgc agcaaacgcc agcggcaatg cattagccag atcctcggcg atcaaaccgg
     1321 gaccgacttc cattgccgcg cgaccgtgca gccaggcacc cgcagaggcc gcctcccacg
     1381 cgttcatgcc ttgcgccaat aaaccggcga tcagtccggc caacacgtcg cccgccccgg
     1441 cggtcgccag ccagggcgga gccgaggcgt tgatcgcgac cattccgtcc ggtcgcgcaa
     1501 taatcgtatc ggcgcccttc agcagcacca cggcattggt ccgcattgcg gcggcgcgca
     1561 cggcggcgac gcggtcaacc tcaatcggac cgaagacgcg cgcgaactca cccgcgtgcg
     1621 gggtcagcac ggcggcaccg tgcaacgcgt caggtttgcc ggcgaacgcg gtaaacacat
     1681 cagcgtcgcc gaccacctcc cggcctgcgg cgatcaaatc aggccagatg ctccgcgcga
     1741 ccgcgggccc aaatccgggt acgcagaccc aaaccgtacg gcggcgatcg gcgagcaggt
     1801 ccgcaagtgg cgcctcggac accagcgtgc ccggcgatcc ggcacgatag attgcggcgg
     1861 cgccggctgc ggcgatcgtt acgagcccag agccggcgcg gcgcgcggtg tcggcggcga
     1921 aacgggcggc accggtcatt tctgcgcctc ccatgatcgt cacatgacca cgagcatatt
     1981 tgtgcgcgtc ggttgccagc gcgggcaact cccacaggcc gggttcatta cggaacgcgc
     2041 gcggttgaac ggcgttcaaa acacccgccg gcatgccgat atcggcgagc accgtctccc
     2101 cgcacagatc tcgcccagga agcaaaagat gaccgggctt gaggcggaag aacgtaacgg
     2161 tcagcgtggc ctgtggtgcg tatccgcgca ccgctccggt tgctccatcc agtccactgg
     2221 gcacatcaac cgcaacgagg cggcctgccg cacgcaacat ctggaccagt ccgggatcga
     2281 ggtcacggct caatccggcg ccaaacacgg cgtcaatcac caggtcggat cgcgcaactt
     2341 cctgtttcgt gaacggaacg ttgatgccat cccagcgtgc ccgggccaac gccgcatccg
     2401 atccggctcg tggtgcgccg agacctgcga ccgttattgg ccacccctcc tgggccaaca
     2461 tccgggccac cacgtaaccg tcgccgccgt tgttgcctgg cccgcacaga accaatgtcc
     2521 ggcagggacg gatcctcgcc tgaatggctc gaaccacagc ccggccagcg ttttccatca
     2581 accgatatcc cggcaccccc aatcccggcg atgccgcatc caccctggcc atttcgtccg
     2641 gggtgagcag ttctcgcgca cgcgggttgt tatgcatgga ttttgcaccc ggagagcggc
     2701 ccatgaaaaa acgtcccggc tgtgaggctg ctcatactat cgcgcgaccg gtttccttca
     2761 aaatcgcgca gcggccgtcg gccaatcgcg gcatgccggt accgtgtgag aaggaaacaa
     2821 gcaatgaacc gcaggcccga tggtaaccga actgtgcagc gcctcattga ccaaagcagc
     2881 gagacctcgg cggacgcggc ccagggaagc gtgtgccatc cggcggccca gcaacgcagc
     2941 agcggcgtga cctcggccgc gcgtcagcag gtttgccaac ggtccgagac catcgatcgg
     3001 gcgccacgat cccggcgtca gggtcggacg atgatgtccg ggctggagat cctgatgctg
     3061 gttccgcttg tcgaacggca aggcctgatt gccgaatacg tcgatcgagg tggtggctgg
     3121 ccggtgcttt cagcgtcgga aaatgccgca ttattggagt tcctggcatc ccgattgccg
     3181 gatccgtcgc acgctttcag tttgtgccgg atggagattg cgttgacccg cgcccggctg
     3241 ggggccgaaa ttttcgtcga gcccgaatac cgatcggtcc agggtcgcag cagacgcgac
     3301 atccagaccc gtatcgaaca cgcagcctgg gactgcatcg aacgcacgat gcagaggcct
     3361 ggggtgaccg aaagttggga ccacatcgaa cgctctgtct gggacagcgt ggaaggcgcc
     3421 atttgggacg gtatcgagcg cgaggcacgg ggccgcacgg aatgcgaggc ctggcgaatt
     3481 ctggaacggt tggcacgcaa tcggatcgaa cgcggcctgt acgcatccct cgtatggttt
     3541 catgccgaac ccgaagccgt cgtgggcgcg ttgcacggtg acgctccgcc gccggtgggc
     3601 aacccggcat atcccatact gttcggccca ggagtgccaa acctgtgccg ggcggcgacg
     3661 ccggaggagg tggtgctgtg ggcaagcctg ccagcagacg acacggcacc ggacctggtc
     3721 gagcggttgt tggctgaagg tatcattggc tacacggatt gattgcatcg gctcgccgcc
     3781 ggcgatggtg gcgagccaga tcgttacatt gtcgcgccga gcacccaggg cgcgaactcc
     3841 gctgcgccga agtcgaatgc ttcgcttttg gtcgcctcgc cggaagccac gcgcagcatg
     3901 agttcgaaga tgcgctggcc gcattcctgt acggactcgt cgccgtcgag gatgctgccg
     3961 caattgacgt ccatatcgtc ctcgatgtga cgatacatcg tggagttagt agccagcttg
     4021 atcgatggcg cgggcttgca gccgaacact gaacctcggc cggtggtgaa acacacgagg
     4081 ctggcaccgc ctgccacctg gccagtggcc gagaccgggt cgtagcccgg cgtgtccatg
     4141 aacacgaagc ctcgggcctg gacttcttca gcgtattgca cgacatccac gagattggtg
     4201 ctgcctgcct tggccattgc gccgagtgac ttttccagaa tggtggtcaa cccaccggcc
     4261 ttgttgccgg gcgagggatt ggcgttcatc tcggcgtttt cgcgtttggt gtaatcctcc
     4321 caccagtgca tcagggcgac gagtttctca ccgacatttt tcgaaatcgc gcggcgggta
     4381 agcaaatgtt cggcaccata ggtctccggc gtttctgaca ggatgacgga accgccgtgc
     4441 cgcaccacca gatcgctggc gtaaccaagt gccggattgg cggaaacacc ggaatagccg
     4501 tccgagccgc cgcattgcag agcaacggtc agcgcgctga cgggcacggc ctcccgggtg
     4561 gcggagttgg actctgccaa tacctcgcgc acgaaatcga cgccggcggc gacggttttg
     4621 cgggtgccgc caacggtctg aatatccagc gaacgcagcc ggcccgcgag gcgttgttcc
     4681 tgcatcagtc cgccgatctg gttgacctca cagccgaggc ccagaacgat gacatgtgaa
     4741 aaattgggat ggcgggcgta gccggccagc gtccggcgca gcacgcgcaa cggctcatcc
     4801 tgggtcatgc cgcagccggt cttgtgggtc agtgcgacga cgccatcgac gttggggtag
     4861 tcggacagcg ggtcgtgacc ggtgaacgga ttgcgctgga acatgttggc gacgagaccg
     4921 gcgacatgtg cggaacaatt cacgctggtc cggatgccga tgtagttgcg cgtggcgacg
     4981 cgaccgtccg ggcggcggat gccccgaaag gttgcctgag ggttgacgta ttcggtaggt
     5041 ctggcgtcga cgccgtaagc gtagtccttg gcgaagtcac ccatttcgca attctgcacg
     5101 tgcacgtgct ggcccggcgc gatgtccgag gacgcgaagc cgatgatctg gccatagcgg
     5161 cggatcgcct cgccgcgggc aatcgggcgg atggcggctt tgtggccggc ggggatgcgt
     5221 tgcgtggccg cggcactgtc ggcgagcggg gtgccgggca gcaacgtgac ccgcgcgatg
     5281 acgacgttgt cgtccgggtg gaggcgaatg acgggtggcg ggggcatgaa caggatcctt
     5341 cgcagcaggc gtgccggtgc ggacagcgag ccattctatc gtgctggtcg gttggttggc
     5401 agtcccgcct gtagattgac cccgcgaaga ccgtaacccg ggccgggcca cgtttggaaa
     5461 attgctcgct ctgtcataaa tatggttatc tggcattacg gcaaccggat tccgcccaat
     5521 gaaaacgact gtcgaactgc cagacccgct ttatcgccag gccaaggcgg tggcagcgct
     5581 gcgtgggcag cgaaatatcg ggacacgccg atgtcgctcg ccgacgcctg tgtcgttcgc
     5641 atggcggagc tgcgtgacga tcactgagta ctgaacctgg actccgattt tgccgtgtat
     5701 cggaaacatg gccgtgttcc gatcccgctt atgcatccgg cgatgccaac cgactaagtc
     5761 cagacgagat attcgaaacc gattaagctt gccatttatc gcaatattgt aacgtaatac
     5821 gttgccaaac cgcggcgatg ttgcgtcgcc catgggagcg acgtccaaag caagaggctc
     5881 cggcgttcat gacaccctca gaagccaatg aagccgcccc gagaggcggc ttcacgcaat
     5941 tcatcgtttt ctgaccgccc tgtcagttcg ccttttcccc gccttccttc cttgcctgcg
     6001 ccaccgcctc ccgagccgcc ttcgccatca acccggagtc gttctggatg gtcagcaact
     6061 ggaaccccat cttcaccatc cgggccgcat aacttgccga tccgttatgg atccccgcga
     6121 acttgccgtg ctttttgcaa gacgccagca acttctcgta gatgcccagg atcagcggct
     6181 cctcgcggtc gaggatcggg atcaggccga gcgagaaccc catatcggac ggcccgatat
     6241 aaatcccgct gatccccggc acacttagga tttcgtcgat gttgtcgatc ccctcctggg
     6301 tttcgatcat cggaatgacc agcacctcgt cattggcggt cgtttggtag ctgctcgcga
     6361 cgccataagc cgcagcccgg atcggcccat tgctgcgctt gcccaacggc ggatacatgc
     6421 aggcgtcggc cagagccttc gcctcggcct tgttgttgca catcgggctg atgatgcccc
     6481 aggcgccgcc atccagcgat ttgccgatga tccccggctc attccacggc acgcgcacca
     6541 gtggcgtgat cggatgcttg tccatcgcct ggaagcactg aaccatcgac tggtagtcct
     6601 ggacgccgtg ctgcatgtcg accgtaacgc tgtcccagcc gcaacctgcc atcacctcgg
     6661 ccgagtagcc ggacgggatc gccagccagc cgttgatgca ggccttgcca gccgcaatac
     6721 gttctttgag tttatttggc atacggacgc atcctcggtt gtcaaagagg gccgcacgct
     6781 aggcgtgggg tctggtcagg tcaacgacgc gaccggccga ccggcccggg tgcgatggcc
     6841 cgggggaacg gaaagtcttg cgagcgggcg cggaaacgcc cacatttcag acatggccac
     6901 tcgaaaaacc ccctccccgg cacccgaaga ctcgcctcag ggtcatgcgc gacagccgga
     6961 cgaggcaccg gcggagcatt cactgccgcc ggaaatgacc agccggcgcg gcgcgaaagc
     7021 ggcgccgatc cccgaaggtt ttctcactgg gcagttgctg attgcgatgc cggcgatggc
     7081 cgatcctcgg tttgcgcaaa gcgtcatcta catgtgcgcg catacgccgg aaggggcgat
     7141 ggggctcatc gtcaaccggc ccgtcgttaa accgacgttc gacgatctgc tgaaacagtt
     7201 gaaagtgtcg ccgcacccgc cggctcgcca gatcaggctg tgcgccggcg gtcctgttga
     7261 gaacgctcgc ggcttcgtcc tgcataccat cgactggacc ggcgagggca gccttcgggt
     7321 caacgacgaa ctcgcgctga cggccagcct ggacgtgctg caggtgatcg ccggcggcgg
     7381 cgggccgcgc gagtgtattc ttgcccttgg ttatgccggc tggggggcgg gacaactcga
     7441 ccaggagatc caggccaacg cctggttgtc ggggcctgcc gacgagtcgt tgctgttcga
     7501 tgccgatcac gacaccaaat ggcggcgcgc cttcgccaaa ctcaacgtcg accctctgtt
     7561 gctgtccgat gccgcggggc acgcctgatc tgggcttgcg tcaccggcat cgatgcattg
     7621 gcatcctgag ccgcttcggc gaagccgcgc ggcgcaacgc gcacttcggg cgttaactct
     7681 ccgttcgtca gttcgtgcgc atcctgcgtg gtgtgttacg aacggaggac accgtggcag
     7741 aactgacgcc ggtcacctcc ctggttcgca ggtccgggtc gcccggggat aaagcccaga
     7801 ctttgccgta tcagcaaaat gcggatcgtc agcgccatgc tgtccggaat cccgcccgac
     7861 ggacatggat gtatcgcacg atgtcgccaa gggatttcct ggccatggtg gcgggcagca
     7921 cgatcctact gtttggtctg gtgtggctgt ggatcgtgac catgccgatg gccttcctcg
     7981 acccggaata cccgtcgtgg cgcgccaaac agttgttact ttcaagctgc gacctgggcg
     8041 acacaatgat acttggggac tcgcgagccg ccactgcgat gatgccggca cgctggcggg
     8101 ttcgggccac caacctcgcc gtcggcggcg gtgagccaat cgaggcgttg gctgcgctcg
     8161 accgagcgct gcaatgcaag gttccgccgc accaggtgat tttgtcgttc gatgcggtgc
     8221 atttcaccca gccggatctg ttctgggaaa gaacggctcg tttcggcttc gtgaacgcca
     8281 gcgaaatcgc cacgttgcgc gaagtatcgc aggatctcgg tgatgtctcg atttatgagt
     8341 tgcgtcatac cgatggtttg ccgtcatggc tgcgcgatgc gatgtaccga gtgcggttcc
     8401 cctcg
//
LOCUS       DATAVD010001395         2106 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3671088, whole genome shotgun sequence.
ACCESSION   DATAVD010001395 DATAVD010000000
VERSION     DATAVD010001395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3671088"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..1583
                     /gene="atpD"
                     /locus_tag="VHX39_26670"
     CDS             153..1583
                     /gene="atpD"
                     /locus_tag="VHX39_26670"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEX3994776.1"
                     /translation="MPLASPDPANATGTVISVRGAVVDVQFDGTALPPVDTALIVAWD
                     RPETLVLEVHSHADLSIVRAIALQATAGLARGTKVHATWAPLSVPVGDAVLGRLLDVV
                     GTVRDQGAPLPEDTPRRGIHAPPPALKDETSASAVFETGIKVIDLLAPLAQGGKAAMF
                     GGAGVGKTVLVMELIHAMVEKYQGISVFAGVGERSREGHELLNDMKSSGVLARTVLIY
                     GQMNEPPGARWRVPLTALTTAEYFRDQKHQNVLLLMDNVYRFVQAGAELSSLLGRLPS
                     RVGYQPTLATEVALLQERIASVAGASVTAIQAVYVPADDFTDPAVTAISSHMDSIIML
                     SRTLAAEGFYPAIDPLASSSVLLDPLVVGDVHYALAERAREALARFKDLQDIIALLGV
                     EELSANDRLIVRRARRLQRFLSQPFVVTEAFTGTPGRSVSRADTLAGCRAILDGETDD
                     WAESSLYMVGTLEDARAKEAAAVKPS"
     gene            1580..2002
                     /locus_tag="VHX39_26675"
     CDS             1580..2002
                     /locus_tag="VHX39_26675"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEX3994777.1"
                     /translation="MRLRITTPLAVVVDADDVRALRADDATGSFGILSGHADFLTSLT
                     IGVVTWRGADDIAHYCAVRRGVLSVTGGQEIAIATREAVTGDDLATLDAMVLARFRAD
                     TETERAERVDSTRLQLNAIRRIVSHLRASGRSGSADFA"
BASE COUNT          335 a          664 c          712 g          395 t
ORIGIN      
        1 cccgggggac ttcaacacca tcgcttgcat ggtcatcgtg gactcctcgg ctgactttcg
       61 tggaggccac ccggcgcgtc gttgatctgg gtcatgtgca ggtccgggtg cgccgtttag
      121 tacgtggctc tcgcgccgaa ggtctgcaag tcatgccgct cgccagcccc gatcctgcca
      181 acgcaaccgg caccgtcatc tcggtccgcg gcgccgtcgt ggatgtgcag ttcgatggga
      241 ccgcgttgcc gccggtcgac accgcgttga tcgtcgcctg ggaccggcct gaaacactgg
      301 tgctggaggt ccacagccac gccgatctct ccattgtccg cgccatcgcg ttgcaggcga
      361 ccgccgggct ggcgcgcggc accaaggtgc acgccacctg ggcgcccctg tcggtgccgg
      421 tcggcgacgc agtattgggg cggctgctcg acgtcgtcgg gacggttcgc gaccagggtg
      481 cgccgctgcc cgaagacacg ccgcggcgag gcatccacgc gccgccgccg gccctgaagg
      541 atgaaacctc ggccagcgcc gtgttcgaga ccggcatcaa ggtgatcgac ctgctggcgc
      601 cgctggccca gggcgggaag gcggcgatgt tcgggggcgc gggggtaggc aagactgttt
      661 tggtcatgga actgatccac gccatggtcg agaaatatca ggggatttcc gtgtttgccg
      721 gagttggcga gcggtctcgc gaaggtcacg agctgctcaa tgacatgaag agttccggcg
      781 tgctggcccg caccgtgctg atctatggcc aaatgaacga gccgcccggc gcccgctggc
      841 gcgtgccgct gaccgcactg accaccgccg agtatttccg cgaccagaag catcagaacg
      901 tgctgctgct gatggataat gtctatcgtt tcgtgcaggc tggcgctgag ctgtcgagcc
      961 tgcttggccg gctgccgtcc cgggtcgggt accagccgac gctggccacc gaagtggctt
     1021 tgttgcagga acgcatcgca tccgttgccg gtgcatcggt cactgccatt caggccgtct
     1081 acgtgcccgc cgatgatttc accgatccgg cggtgacagc gatctccagc cacatggaca
     1141 gcatcatcat gctgtcgcgc acgctggctg ccgaggggtt ctacccggcg atcgatccgc
     1201 ttgcctcatc gtccgtgctg ctcgatccgt tggtcgtggg cgacgtgcat tacgctttgg
     1261 ccgagcgtgc gcgcgaagcg cttgcccggt tcaaggacct gcaggacatc atcgctttgc
     1321 tcggcgtcga ggaactcagt gccaacgacc ggctgatcgt ccggcgcgcc cgccggctgc
     1381 agcgttttct cagccagcca ttcgtggtaa cggaggcctt caccggtacg ccgggacgca
     1441 gtgttagccg ggccgacacg ctcgccggct gtcgcgccat cctcgacggc gagaccgatg
     1501 actgggctga aagttcactg tacatggttg gtactttgga ggacgcgcga gccaaggaag
     1561 cggccgcggt gaaaccgtca tgaggttgcg cattaccacg ccgctggctg tcgtggtgga
     1621 cgccgacgat gtgcgggcat tgcgtgccga cgatgccacc gggagtttcg ggatattgtc
     1681 tggtcacgcg gattttctga ccagcctgac gatcggtgtg gtcacctggc gcggcgccga
     1741 cgatattgcg cattactgcg ccgtgcggcg tggcgtattg tccgttaccg gcggccagga
     1801 gattgccatc gccacgcgag aggcagtgac cggcgatgat cttgcgacgc tcgatgccat
     1861 ggtgcttgcc cgatttcgtg ccgataccga gacggagcgg gcggagcggg tcgacagcac
     1921 tcggctgcaa ttgaacgcaa tccgccggat tgtcagtcac ctgcgagcct ccggccgcag
     1981 cggttcggcg gacttcgcat gatagttgcg gaaccgtcat gaccggagcg agtcgatgac
     2041 gaccccgaac gaacaggatc cgctggtaaa gggcgctcgg ctgcgacagg aacgcgccca
     2101 ccgtgg
//
LOCUS       DATAVD010001396         3197 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2925478, whole genome shotgun sequence.
ACCESSION   DATAVD010001396 DATAVD010000000
VERSION     DATAVD010001396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3197
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2925478"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="VHX39_26680"
     CDS             complement(<1..494)
                     /locus_tag="VHX39_26680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994778.1"
                     /translation="MADATPLSSGLAIPLHFRIHEVRHAAAPAAPPTVLPANLGPLAA
                     FVGNWQGKGFNTIFRPDNTVTPTPFTPPITSDNVLELNLTEESLSFSSNLSSIPNRGS
                     QTQGDIFLNGVPYLQTISDVTTLPATGIHFEPGMWLSVPATGSPHEPITVARMASIPH
                     GTTI"
     gene            complement(743..2110)
                     /gene="der"
                     /locus_tag="VHX39_26685"
     CDS             complement(743..2110)
                     /gene="der"
                     /locus_tag="VHX39_26685"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007282294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEX3994779.1"
                     /translation="MPAGVLPVVVIVGRPNVGKSTLFNRLAGRRAALVADTPGVTRDS
                     KEAEAMLRGRLTRLVDTAGLEEAAPETLAGRMRAGATVAVREADLVLFVIDARAGLTP
                     VDRHFAQWLRRQDKPVMLVANKAEGRMASSAILDAYELGFGDPVGVSAEHGDGIADLM
                     GEIAARLPPETPDEDADADSGRPLKLAIVGRPNAGKSTLLNRLLGEDRMLVGPEPGLT
                     RDAIASVLTDESGQRIEIVDTAGLRRPARIEAELEKLSVGAAIGALKMAEVVILAVDA
                     TQGLNDQDLRIAQLIEREGRACVLVLNKWDAVEDRNATRRAISDRLETSLTQMKGIPV
                     VTLSALTGAGVERLLPVVRQAHEIWNKRVTTGELNRWFEGALERHPPPLVDGRRLKLR
                     YVTQAKARPPTFLAFGTRAERIPDDYSRYLVNSLRETFNLPGTPIRLQLRGTKNPFVE
                     NSGRD"
     gene            complement(2172..>3197)
                     /locus_tag="VHX39_26690"
     CDS             complement(2172..>3197)
                     /locus_tag="VHX39_26690"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX3994780.1"
                     /translation="GYRRQILAQPVVGDGVVFAMDSDSVVTAFNLATGAKVWRTPTVN
                     EDLDSSNVGGGLCWDAGTVYAVNGMTELLALDAARGGVRWRHSMGVSARSAPTVADGK
                     IFLTTIDSKLVALSKDDGHQLWSYQATQTETTLLGSPAPAFDQGIVVAGFASGELAAV
                     RADSGNVIWTDGLGLAEGEPGIVDFMAIRGEPVISNNQIFATGLGGVTIAADILTGRR
                     VWERRVASENTPCVAGDWMFLISTDQEIGAINIADARISWAATLPRWENPDKKKDPIT
                     WFGPVLAGARLIVVGTNKQALAIDPATGATVTIYELSDVAAPITPVVVDGTMLTVTND
                     ARLTAWR"
BASE COUNT          570 a         1050 c          972 g          605 t
ORIGIN      
        1 ataatcgtcg tcccatgcgg gatcgacgcc atccgcgcca ccgtaatcgg ctcgtgtggg
       61 cttcctgttg ccggcacact caaccacatg ccgggctcaa aatggatgcc ggtcgccggt
      121 agcgtggtga cgtcgctgat ggtttgcaga tacggcacgc cgttgagaaa aatgtcgccc
      181 tgcgtttgcg agccgcggtt cggaatcgaa ctcagattcg atgaaaacga cagcgactcc
      241 tcggtcaaat taagttcgag aacgttgtcg gaggttatcg gcggagtgaa cggagtgggc
      301 gtcaccgtat tgtcggggcg gaagatggta ttgaaacctt tgccttgcca attgccgaca
      361 aatgccgcca ggggcccgag atttgccggc aggacggtgg gcggggctgc cggcgcggcc
      421 gcgtgtctga cctcgtgaat gcggaaatgc aacgggattg cgagcccgct ggaaagcggt
      481 gttgcgtctg ccattgtggt tttcctttcg taggttcacg gatacgtggc ggtcaccgaa
      541 ccgaagcgct cggggcaaat ccgaatcacc ggcaccgccg cacagcgagt gcgcagtcag
      601 gtttacgttc ggacaaccgt tcgttaatcg cggctttcag cacgcgtgta taatttcgtt
      661 acttgcggtg cgctgtgatc caactcacag ttttgccaat ttcacgaaag taccaaattt
      721 gggtcctcac tggagcccag ggtcagtcgc gcccggaatt ctcgacaaat ggatttttcg
      781 taccgcgcag ctgcaatcgg atcggtgttc ccggtaaatt gaaagtttct cgtaaactat
      841 tgaccaaata gcgtgagtaa tcgtcaggta tccgttccgc tcgcgtgcca aatgccagga
      901 atgtcggcgg cctcgccttg gcctgcgtca cgtaccgcag cttcaatcgc cgcccgtcga
      961 ccagcggcgg cggatgtcgc tccaacgcgc cttcgaacca acggttcaac tccccggtgg
     1021 tgacgcgttt gttccagatt tcgtgcgcct gccgcacgac cggcagcaac cgctccactc
     1081 ccgcgccggt cagtgccgat agcgtgacca ccgggatgcc cttcatctgg gtcaacgagg
     1141 tttccagccg gtcggagatc gcgcgccgtg tggcattgcg atcctccacg gcatcccact
     1201 tgttcaacac cagaacgcac gcccggcctt cgcgctcgat caactgggcg attcgcaagt
     1261 cctgatcgtt caggccctgg gttgcgtcca ccgccaggat caccacctcg gccattttca
     1321 acgcgccgat ggcagcgccc acggacagct tttccaactc ggcttcgatc cgcgccggcc
     1381 ggcgtaggcc cgcggtgtcg acaatctcga tccgctggcc gctctcgtcg gtcaacaccg
     1441 aggcgatcgc atcgcgggtc agccccggct cggggccaac cagcatacgg tcttcgccga
     1501 gcaaccggtt cagcaacgtc gacttccccg cattgggccg cccgacaatg gccagcttca
     1561 acggccgccc agagtctgcg tcagcatcct catccggcgt ttccgggggc aaccgggcgg
     1621 cgatctcgcc catcaggtcg gcaatcccat cgccatgctc ggccgagacg ccgaccgggt
     1681 cgccaaaacc cagttcgtag gcgtcaagga tggcggacga tgccatgcgt ccctcggctt
     1741 tattcgccac cagcatcacc ggtttgtcct gccgccgcag ccactgagca aaatgccggt
     1801 ccaccggagt caggccggca cgggcgtcga tcacgaacag cacgaggtca gcctcccgca
     1861 ccgccaccgt ggctccggcg cgcatgcggc ctgccagagt ttccggcgcg gcttcctcca
     1921 accctgcggt atcgaccagc ctggtcaggc gaccgcgcaa cattgcctcg gcttccttgc
     1981 tgtcgcgtgt gacgccgggc gtgtcggcca ccagcgccgc ccgccgtccc gcgagccggt
     2041 tgaacagcgt cgatttgccg acattcggcc ggccaacgat gacgacaacc ggcaggacgc
     2101 cagcgggcat tggggcgaca gcaggcgaca ggacggcggg gggcggcata ccggggttcc
     2161 tcaggcttac gctatcgcca ggcggtgagc ctcgcgtcgt tggtaaccgt cagcatcgtg
     2221 ccatcgacca cgaccggtgt tatcggagcg gccacgtcgg acagctcata tatggtcacg
     2281 gtcgctccgg tcgcggggtc gattgcgagg gcctgcttgt tggtgcccac gacgatcagc
     2341 cgtgcgccgg ccagtactgg gccgaaccag gtgatcggat ctttcttctt gtccggattc
     2401 tcccaccttg gcagcgtggc agcccatgaa atgcgggcat cagcgatatt gatggcgccg
     2461 atttcctggt cggtggaaat caggaacatc cagtcgccgg cgacgcacgg cgtgttctcg
     2521 ctggccaccc gccgctccca cacgcgccgt ccggtcagga tgtcggcagc gatggtaacg
     2581 ccgcccagac cggtggcaaa gatctgattg ttactgatca ccggctcgcc gcggatcgcc
     2641 atgaagtcca cgatgccggg ttccccttcg gcgagaccca gaccgtcggt ccagatcacg
     2701 ttgccgctgt cggctcgcac cgcggcaagc tcgcccgagg caaagccggc aaccacgatg
     2761 ccctggtcaa acgccggcgc cgggctgccc aatagcgttg tttctgtctg ggtggcctga
     2821 taggaccaca actgatggcc gtcatccttg gacagggcca ccaatttgct gtcgatcgtg
     2881 gtcaggaaga tcttgccgtc ggccaccgtc ggggcggagc gagcggacac gcccatgctg
     2941 tggcgccacc gcacacctcc tctggcggcg tccagcgcaa gcaactcggt catgccgttg
     3001 actgcgtaca cagtgccggc atcccagcac aagccgccgc caacgttcga actgtccagg
     3061 tcctcgttca ccgtcggcgt gcgccagact ttcgcgccgg tggccagatt gaacgcggtg
     3121 acaaccgagt cagagtccat ggcgaatacc acgccatcgc cgaccaccgg ttgggcgaga
     3181 atctggcgtc ggtaacc
//
LOCUS       DATAVD010001397         1798 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3671135, whole genome shotgun sequence.
ACCESSION   DATAVD010001397 DATAVD010000000
VERSION     DATAVD010001397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1798
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3671135"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            468..782
                     /locus_tag="VHX39_26695"
     CDS             468..782
                     /locus_tag="VHX39_26695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019091629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HEX3994781.1"
                     /translation="MSETLLDVKGMSCPLPVLRANRSLRSMAPGERLRVLATDRAAIA
                     DFKAFCQETGHALIAMSEEAGVLSFVIRRRPDPDPPNPGGAAQNAGQRDTNKVPPTTK
                     ET"
     gene            784..1716
                     /locus_tag="VHX39_26700"
     CDS             784..1716
                     /locus_tag="VHX39_26700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HEX3994782.1"
                     /translation="MATALISHAACLEHDPGPYHPESPDRLRAVLQALEAPEFATLIR
                     EEAPSATKEQLVRVHPVRIVDAILAIRPEDGDTVNIDADTAMSAGSAEAALRAAGAGV
                     LGVDLVMSGAVANAFAAVRPPGHHAEPSRPMGFCLFNNAGVAAQHARAAHGLQRVAVV
                     DFDVHHGNGTQALFAQNPDLFYGSSHQYPFYPGTGDVWERGIANNIINVPLRERDSSA
                     AFRDAWAGTIIPALERFDPQFLIISAGFDAHREDPLAQIRLETDDFAWITDALLAVAR
                     THAGGRVVSMMEGGYDLEALAACAAVHVRGLMHA"
BASE COUNT          328 a          589 c          545 g          336 t
ORIGIN      
        1 gccggtttcg gattgatggt cgcgtccggc gccaacatgg aaggtgtgcc accgactttt
       61 gcgccacaac gttcgcagaa tattccttcg cccattttga aagtgaccgc atgcggacac
      121 ccggtggatg aactactgct catgctgcta ccctcataat atttcggaac atggtcggct
      181 cattgtggcc ttggagcaag ccagtgtgag gataacggcc tgaaatgtta ccggaatgcc
      241 cagggttcga aatctatgac ttgttcgcga tcccggcgtc aactggactg cggccggtta
      301 cgcaacgaac cattccggct gatgcgggat tgcccgcaag gttctggtac acatccttgg
      361 tcactgccca tgcccaggcc agtgaagccg ggacatagcg cgcgagccgg ctgtatcctt
      421 acgtaaccac ccttgcccga tttccggccg atccccacta tatgcgcatg agcgaaacct
      481 tgctcgacgt caaaggcatg agctgtccgt tgccggtgct tcgtgccaac cgctcgctgc
      541 gctccatggc gccgggagag cggctgcgtg tgctcgccac cgaccgtgct gcgatcgccg
      601 acttcaaggc tttctgccag gaaaccggtc acgctctgat tgccatgagc gaagaggccg
      661 gcgtgctgag tttcgtcatt cgccgccggc cggatcccga ccccccaaat ccaggagggg
      721 cggcgcagaa cgccggccaa agggacacca acaaggtgcc cccaacaaca aaggaaacct
      781 gacgtggcca ccgcgctgat ctcgcacgct gcctgcctgg agcacgatcc cggcccgtat
      841 cacccggaaa gcccggatcg gctgcgcgcg gtgttgcaag ccctcgaggc gccggaattt
      901 gctacgctga tccgggaaga agcgccgtcc gcgaccaagg aacaactggt ccgcgtccat
      961 ccggtgcgaa ttgtcgacgc catcctggcg atccggcccg aggacggcga cacggtgaac
     1021 atcgacgccg acaccgccat gagcgcgggc agtgccgagg cggccttgcg tgccgctggt
     1081 gccggcgtcc tcggcgtcga cctcgtcatg agtggtgcgg tggccaacgc cttcgccgcc
     1141 gtccgtcccc cgggccatca cgccgagccg tcccgcccca tgggcttctg tctgttcaac
     1201 aatgcaggag tcgcggccca acatgctcgg gcagcgcatg ggttgcagcg tgtcgcggtg
     1261 gtggacttcg acgtgcatca cggcaatggc actcaggcac tgttcgcaca gaacccggac
     1321 ttgttttacg ggtcctcgca tcagtatccg ttctatcccg gcaccggcga cgtctgggaa
     1381 cgcggcattg ccaacaacat catcaatgtt cccctgcgcg aacgcgactc ctccgccgcc
     1441 tttcgtgacg cctgggctgg aacgatcatc cccgccctgg aacgtttcga cccgcagttt
     1501 ctgatcatct ccgcgggctt cgacgcgcat cgcgaggacc cgctggcaca aatccgcctg
     1561 gagacggacg actttgcgtg gattaccgat gccctgttgg cggtggcccg gacccatgcc
     1621 ggaggacggg tggtgtcgat gatggaaggc ggctacgacc ttgaggctct ggccgcctgc
     1681 gctgcggtcc acgtgcgcgg cctgatgcac gcctgaggag ttctgaaatg gccgacgcca
     1741 catcgccaga cgtcaccaaa atgtcgttcg aggacgctct ggccgagctg gaacagat
//
LOCUS       DATAVD010001398         2559 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1061869, whole genome shotgun sequence.
ACCESSION   DATAVD010001398 DATAVD010000000
VERSION     DATAVD010001398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2559
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1061869"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(363..1307)
                     /locus_tag="VHX39_26705"
     CDS             complement(363..1307)
                     /locus_tag="VHX39_26705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX3994783.1"
                     /translation="MDQITARLDPAKFRHPFATAKGETRAQVALRSLDTLWFNTGTLC
                     NLTCANCYIESSPRNDRLDWLRLDDVRAYLDEIACERLPTRLIGFTGGEPFMNRDIIA
                     MLDLVLSRGLHALILTNAMKPMRKLRAALLDLRDRYPGGLTIRVSLDHYTQAIHEAER
                     GRRSWAPTIDGLVWLANNGFALDVAGRRFTPETEDQMRAGYARLFAELGVALDAHDPV
                     RLMLFPEMDPGRDVPEITTACWGILHKSPDDVMCASARMVVKRKDAAAPAVLACTLIP
                     YDPRFELGRTLTEAAGAVALNHPYCASFCVLGGAACSR"
     gene            complement(1387..2283)
                     /locus_tag="VHX39_26710"
     CDS             complement(1387..2283)
                     /locus_tag="VHX39_26710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006557794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEX3994784.1"
                     /translation="MNAKAATPRLGRGLAALLGEMPVRSGAETAADDIRRLSIDLLDP
                     NPFQPRMNFDEEMLQDLAESIRTQGVLQPILVRPHPDVAARYQIIAGERRWRAAGISG
                     LHEIPVICRELNDVESAAAALIENLQRENLNPIEEAEGYQRLIQNFGLTHEALGTAVS
                     KSRAHVGNIVRLLTLPDTVRDEVRKGALSLGHARAMLTLPDPGRIVPEVVKKGLSVRQ
                     TERLVQRLLTEKTQGKTAVSPPDNAHVEHDLAAQIGYRVKVSSTPRGDGSLTIWFNDL
                     FQLDDLITRLTAANEVRAAEED"
     gene            complement(2280..>2559)
                     /locus_tag="VHX39_26715"
     CDS             complement(2280..>2559)
                     /locus_tag="VHX39_26715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEX3994785.1"
                     /translation="PALALCGVVLTMYDRRNNLSDAVAADARGFFGEWVYETVIPRNV
                     RLSEAPSHGVPVMQYDPKSAGALAYAQLAEELVRRDSVAKRKAAVAAR"
BASE COUNT          478 a          837 c          764 g          480 t
ORIGIN      
        1 gatatcgtcg cggccgacgg ccatctggcg gagtttcgac ctctgcccgt gttggaatgg
       61 tacttcgatc gtattttaca gcaattagcc gcacaccgca tcccggcagt gttcatcgcc
      121 gtacctatga acgacgccac agcgaacgcg gcgtcacctg gcgttgcacc agcatttcgg
      181 gcatggctcg ccggttatga ggcgcgttac cctggattcc gggttgtcgg gaatgtcatg
      241 ccgcactggc cggatgcatg gttcggcgat gggtttgctc atctcaatcc cgctggggcc
      301 gtgcggttca gtactgggct ggaacgctgc ctggacactc caacgttgct cgctgcgtgc
      361 gttcagcggc tacaggccgc gccgcccagt acacagaacg acgcgcaata cgggtggttc
      421 aatgccaccg cgcccgccgc ctccgttaac gtgcggccga gttcgaaacg cggatcgtaa
      481 gggatcagcg tgcaggccag caccgctgga gcggcggcat ccttgcgctt caccaccata
      541 cgcgccgacg cgcacatcac gtcatcgggt gacttatgca agatgcccca gcaggcggtg
      601 gtaatttccg gcacgtcgcg gccggggtcc atctccggga acagcatcag acgcaccggg
      661 tcatgcgcgt ccagtgcaac acccagttcg gcaaacaacc ttgcgtagcc ggcacgcatc
      721 tggtcttcgg tttccggggt aaagcggcgg ccggcgacgt cgagggcaaa accgttgttg
      781 gccaaccaga ccagaccatc gatggtcgga gcccaggagc ggcggccacg ctcggcttcg
      841 tggatggcct gggtgtagtg gtccagcgag acgcgaatcg tcagaccgcc cgggtagcga
      901 tcacgtagat ccagcaatgc cgctcgcagc ttgcgcatcg gcttcatggc gttggtcagt
      961 atcagagcgt gcaagccgcg cgacagcaca aggtccagca ttgcgataat gtcgcgattc
     1021 atgaacggct cgccgccagt aaaaccgatc aaccgtgttg gcagccgttc acaggcaatt
     1081 tcatccaggt aagcgcggac gtcgtcgagc ctgagccagt ccagacggtc attacgcggt
     1141 gacgattcga tatagcaatt ggcacaggtc aaattacaca aagtaccggt gttgaaccaa
     1201 agcgtgtcaa gcgagcgtaa cgcgacctgg gcgcgcgtct cgcccttggc ggtggcgaaa
     1261 gggtggcgga attttgccgg gtcgaggcga gctgtgatct ggtccatgcg gcgatcctac
     1321 cgaaaccggt ctcgacattc gagagggggt tgccccgcga tgccccgccg gcatcgcaag
     1381 gttccttcaa tcctcctccg ccgcccggac ctcgttggcc gcggtcagcc gcgtaatcag
     1441 atcgtccagc tgaaacaaat cattgaacca gatcgtcaac gatccgtccc cccgcggcgt
     1501 gctcgacacc ttcacgcgat agccgatttg cgccgccaga tcgtgctcga catgcgcatt
     1561 gtcgggcggg gacaccgcgg tcttgccttg cgtcttctcg gtcagcaaac gttgcaccag
     1621 ccgttcggtt tgccgcaccg agagaccttt cttcaccacc tccggcacga tccgcccagg
     1681 gtcgggcaag gtcagcatgg ccctggcatg gcccagagac agcgctcctt tgcgcacctc
     1741 atcgcgcacc gtatcaggta aggtcagcaa ccgcacgata ttgccgacat gcgcccgcga
     1801 cttgctgacg gcggtgccaa gcgcctcatg ggtcaggccg aagttctgga tcaggcgctg
     1861 ataaccctcg gcctcttcga tcgggttgag gttttcccgt tgcaggttct cgatcaacgc
     1921 ggcggcggca gactccacat cgttcagttc gcggcagatc accggaattt cgtgcaggcc
     1981 ggagatgccc gcggcccgcc agcgccgctc gccggcaatg atctgatacc gcgccgcaac
     2041 gtccggatgc ggccgcacca ggatcggctg caatacgcct tgcgtgcgga ttgactcggc
     2101 aaggtcctgc aacatctcct cgtcgaaatt catccgcggc tgaaacggat tgggatccag
     2161 cagatcgatc gacagccgcc tgatatcgtc ggccgctgtc tcggcaccgc ttcgcactgg
     2221 catctcgccc aacaaagcgg caagacctcg ccccagcctc ggcgttgctg ccttggcgtt
     2281 catcgggccg cgaccgcggc tttgcgtttg gcaacgctat cgcgccgcac cagttcctcg
     2341 gccaattgcg cgtaggcgag cgcaccagcc gatttcgggt cgtattgcat caccggcaca
     2401 ccatggctcg gtgcttccga cagccgaaca ttccgaggaa tcaccgtttc atacacccac
     2461 tcgccaaaga acccccgcgc atcggcggca accgcatccg acaggttgtt ccgcctgtca
     2521 tacatcgtca gcaccacgcc gcacagcgcc agcgcgggg
//
LOCUS       DATAVD010001399         3966 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1432904, whole genome shotgun sequence.
ACCESSION   DATAVD010001399 DATAVD010000000
VERSION     DATAVD010001399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3966
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1432904"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..386)
                     /locus_tag="VHX39_26720"
     CDS             complement(<1..386)
                     /locus_tag="VHX39_26720"
                     /inference="COORDINATES: protein motif:HMM:NF018770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1365 family protein"
                     /protein_id="HEX3994786.1"
                     /translation="MTYSAIYHGQVVHTRFRPVRHRLRHRMLWLLLDLDELPMLAQRL
                     RLFSLNRFNLVDFRDRDHGDGSVISLRTQIEQHLRGAGLAVDAGAIRVLCMPRVLGTV
                     FNPLSVFFCYRADGRLQAMVYEVHNT"
     gene            complement(383..1720)
                     /locus_tag="VHX39_26725"
     CDS             complement(383..1720)
                     /locus_tag="VHX39_26725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3994787.1"
                     /translation="MPYSRAPLDIAVIGTGIAGMSAAWLLSHAHRVTVYEQATRLGGH
                     SHTTDVAGLDGTVAVDTGFITYNETAYPNLTALFRCLEVATQPSDMSFAVSLRDGALE
                     YAGTDLHGLFAQPRNLIRPRFWRMLRDLMRFYREAPQELATMDNEALSLRAWLDRRGY
                     GPAFVEDHLLPMAAAIWSTPTDAVGDQPAANFIRFCQNHGLLQVKNRPIWRTVVGGSR
                     SYVTRLTRPYMREARLGCGVRALRRFADGVQVSDTFGGQARFDHVVVATHPDQALAML
                     SDRSDAEAALLGAFRYSLNPVVLHTDASLMPRRRAAWSSWNYLGDAAAGGPSVTYWMN
                     RLQGLRTADPLFVSLNPPRPPDSARVLLTEQYAHPQLDAAAVAAQRRLWSLQGVRRTW
                     FCGAWFGAGFHEDGLQSGLAVAEQLGDLSRPWRVANESGRIHVGAVPVMADAA"
     gene            1930..2514
                     /locus_tag="VHX39_26730"
     CDS             1930..2514
                     /locus_tag="VHX39_26730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994788.1"
                     /translation="MSVGPQPGSPDLLIQATTTHGNRLALLALFERFVPRVKAYLMQL
                     APAAGSTKKQVLLQVWRNAAQHDPKRADAAARIFTIACNMRIDVAHRTRLAMPIPDKP
                     ALTPAADAILAAEDRGIRVDAALLSLPPHRHTDIETACVPQGAFSDETSEYPLDDTPF
                     SGVGPETLITSCSGPRGSLAPARQATLCFICGGG"
     gene            2490..3311
                     /locus_tag="VHX39_26735"
     CDS             2490..3311
                     /locus_tag="VHX39_26735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1295 domain-containing protein"
                     /protein_id="HEX3994789.1"
                     /translation="MLHLWWWMMGALIITMSLGLAFAMSIAWLIQRRVSNAGWVDVAW
                     SFAVGAAGVVYALYPLQSGPPTIRQCLIALLAACWSLRLGLHIAGRTRHGTEDARYAQ
                     FRRDWGDAFQSHMFWFLQIQAAAAALLAISMLLAARTPRPLSTQDAIAVAVLALSIIG
                     EAIADRQLRRFRSNPGNHSRVCDLGLWGWSRHPNYFFEWLGWVAYPLFAIDTGGGYPW
                     GWFALSAPAFMYWLLVYVSGIPPLEQQMLRSRGDAFRNYQTRVSAFIPFPPARSS"
     gene            3308..>3966
                     /locus_tag="VHX39_26740"
     CDS             3308..>3966
                     /locus_tag="VHX39_26740"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3994790.1"
                     /translation="MNLIAAATSVVERMPLPDSFTRTSIALLVERTSRKLQQADPALG
                     RKFAAGMADFPIALHTDDANAQHYELPPTFFSLILGPRHKYSCCLYDNATTMAEAEDR
                     ALEETAEHAGLMDGQRILELGCGWGSLTLWMAERFPRSEILAVSNSHPQRRFIEAAAA
                     RRGLRNVRVQTADMNSFEAGARFDRVVSVEMFEHMANWPALLVRVHAWLEPQGTLFLH
                     V"
BASE COUNT          738 a         1277 c         1218 g          733 t
ORIGIN      
        1 aacgtgttgt gcacctcgta caccatcgcc tgtaggcgac cgtcggcgcg gtagcagaag
       61 aacacgctca agggattgaa taccgtgccc agcacgcgcg gcatgcacag cacgcgaatt
      121 gcgccggcat cgaccgccaa ccctgcaccc cgcagatgct gttcgatctg agttcgcaag
      181 gagatcaccg aaccgtcgcc gtggtcgcga tcgcggaaat ccaccaaatt gaagcggttc
      241 agcgaaaaca gccgcagccg ttgcgccagc atcggcagtt cgtctaggtc cagcagcagc
      301 cacagcatgc gatgccgcag ccgatgccgc accggccgga agcgcgtgtg cacaacctgg
      361 ccgtgataga tcgcggaata ggtcatgccg catccgccat caccggcacg gcgccgacgt
      421 ggatccgccc ggattcattg gcgacacgcc aaggccgact gaggtcacca agctgctcgg
      481 cgaccgccag tcctgattgt agcccatctt catggaagcc cgcgccgaac caggcgccac
      541 agaaccaggt gcgacgaacc ccttgcagcg accacaaccg tcgctgcgcg gcgacggcgg
      601 cggcgtccaa ttgcgggtgc gcatattgct cggtcagcag cacgcgggcg gaatccggtg
      661 ggcgcggcgg atttaatgaa acgaacagtg ggtcggcagt gcgcaacccc tgcagccggt
      721 tcatccagta cgtcaccgac ggccctcccg cggctgcgtc acccaggtaa ttccagctcg
      781 accaagccgc gcgacggcgt ggcatcaatg aggcatcggt atgcagcacg acagggttca
      841 ggctataccg aaaggcccca agcaacgcag cctcggcatc ggatcgatcg gacaacattg
      901 caagagcctg gtcgggatgt gtcgcgacca ccacgtggtc gaagcgtgcc tgaccgccaa
      961 acgtgtcaga cacctgcaca ccgtccgcga aacgtcgcag tgccctgacg ccgcatccca
     1021 gtcgagcctc gcgcatgtaa ggccgcgtca gccgagtgac gtagctgcgg ctgccgccga
     1081 ccacggtgcg ccagatggga cggttcttta cctgcaaaag cccatgattc tgacagaaac
     1141 gaatgaaatt ggcggcaggc tgatcgccga cggcgtcggt cggtgtggac catattgccg
     1201 ctgccatcgg cagcaggtga tcctcgacga aggccggccc gtagccacgc ctgtcaagcc
     1261 atgcacgcag actcaaggcc tcattgtcca ttgtcgccaa ttcttgcggt gcctcgcgat
     1321 agaagcgcat caggtcccgc agcatgcgcc agaagcgcgg acggatcagg ttacggggct
     1381 gagcaaacag cccgtgcagg tcggtgccgg catattccag cgcaccatcg cgcagcgaca
     1441 cggcgaacga catgtctgac ggctgggtcg ccacctccag gcaacggaac agtgcggtga
     1501 ggttgggata ggcggtttca ttgtacgtga tgaatcccgt gtccaccgcg accgtgccat
     1561 cgagcccggc cacgtccgtg gtatggctgt ggccgccaag ccgtgtcgcc tgttcgtaca
     1621 cggtaacgcg atgggcgtgg gacagcagcc acgccgcgct catcccggcg atgcccgtgc
     1681 cgattacggc gatgtccaac ggcgcgcgac tgtacggcat cgtatctccg gacgttgaaa
     1741 ttctggcttg gatacggatt acgcgcgggc ttggatcgcc gcgacggtca cgaaaggtat
     1801 aacattcttt tttaccaccc atttgatccg ttgcggtgca tcgctcgtat cgaagacatg
     1861 aacggtgtgg tcttggcccc ttgtcgcgct ggctcccgcc aatccactcg cgatggatgg
     1921 cgatcgcgaa tgagcgtcgg gccgcagcca ggcagccccg acttgctgat ccaggccacg
     1981 acgacgcacg gtaatcgctt ggcgctactg gctttgttcg agcggtttgt tccgcgtgtg
     2041 aaagcctacc tgatgcaact tgcaccggcc gcggggtcga ccaagaagca ggtgctgcta
     2101 caggtttggc gcaatgccgc gcaacacgac ccgaagcgcg ccgatgcagc cgcgcgcatc
     2161 ttcacgatcg cgtgcaatat gcggatcgac gtggcacacc gcacacggct tgccatgccg
     2221 ataccggata aaccggccct gactccggcg gcggatgcga tcctggcggc cgaggaccgc
     2281 ggcatccgcg tggatgctgc cctcctctca ctgccgcccc accgccatac cgacattgaa
     2341 acggcctgcg ttccgcaagg cgcattttcc gatgagacca gcgaatatcc gctggacgac
     2401 acgccatttt ccggcgtcgg ccccgagacg ctgatcactt catgctctgg accgagagga
     2461 tctctggccc ccgcacgaca agcgacgttg tgcttcatct gtggtggtgg atgatgggcg
     2521 cgctaattat tacgatgtca ctgggtctcg ccttcgccat gtcgatcgcc tggctgatcc
     2581 agcgccgcgt cagcaacgcc ggttgggtgg acgtcgcgtg gagcttcgcg gttggtgccg
     2641 ccggcgtggt ttatgcgctg tatccgttgc aatcaggacc accgacaatc cggcaatgcc
     2701 tgatcgcgct gcttgccgcc tgttggtcgc tgcggctcgg tttgcatatc gcaggtcgca
     2761 cccggcatgg cacggaggac gcacgttacg cccagttccg ccgtgactgg ggcgacgcat
     2821 tccaaagcca catgttctgg ttcctgcaga tccaggccgc cgccgccgcg ctgctggcga
     2881 tctcgatgct gctcgccgca cgcacaccgc ggccgctgtc cacccaagat gcgatcgccg
     2941 tcgccgtgct ggccctgtca atcattggcg aggcaattgc cgatcggcaa ctgcggagat
     3001 ttcgttcgaa tccaggcaac cattcgcgcg tttgcgacct cgggttatgg ggctggtcgc
     3061 ggcacccaaa ctatttcttc gaatggctgg gatgggtcgc ctatccgctg ttcgcaatcg
     3121 ataccggggg tggttatccg tggggctggt tcgcgctgtc ggcaccggcg ttcatgtatt
     3181 ggctgctggt gtacgtgtcc ggcattccgc cactcgagca acagatgctg cgctcgcgag
     3241 gcgatgcgtt tcgcaactac caaacccgag tcagcgcttt cattccgttc ccgccagcga
     3301 ggtcgtcatg aatctcatcg ccgccgctac gagcgttgtc gagcgcatgc cgttgcccga
     3361 tagcttcacc cgcacctcca tcgcgcttct cgtcgagcgt accagtcgca agctgcagca
     3421 ggccgatccg gctctgggac gaaaattcgc ggctggaatg gcggattttc caatcgcact
     3481 gcataccgac gacgccaacg cccaacatta cgagctgccc ccgacgttct tcagtttaat
     3541 cctcggaccg cgccataagt attcctgctg cctgtacgac aacgcgacga ccatggccga
     3601 ggctgaggac cgcgcgctgg aagaaaccgc cgagcatgcc ggcctgatgg acggacagcg
     3661 catcctggaa ctgggctgtg gctggggctc gctgacgcta tggatggcgg agcggtttcc
     3721 acggtcggag attcttgcag tctccaactc acatccgcag cggcgcttca tcgaagccgc
     3781 cgcggcacgc cgcggtctgc gcaatgtgcg ggtgcagacg gccgacatga acagcttcga
     3841 agccggcgcg cgattcgatc gggtcgtatc ggtagagatg ttcgagcaca tggcgaactg
     3901 gcctgccttg ttggtgcgcg tgcatgcctg gctggaaccg caaggaacgt tgttcctgca
     3961 cgtgtt
//
LOCUS       DATAVD010001400         5635 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_137473, whole genome shotgun sequence.
ACCESSION   DATAVD010001400 DATAVD010000000
VERSION     DATAVD010001400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5635
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137473"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..801
                     /locus_tag="VHX39_26745"
     CDS             <1..801
                     /locus_tag="VHX39_26745"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3994791.1"
                     /translation="VQQDGQAVKLYIMTPDHAADHPGVLYFIHGGVWLVGNFQNHKRL
                     LRDLVVGSGQVGVFVEYTPLPAAKFPTQMEESYAGLKWVAAHAGEFGADGSRIAVAGN
                     SVGGDMTAAITLMAKDRNGPKIAYQVLFIPATDASVDTASYHEFGTGRLLTRAFMKYG
                     WDLYAPDAAMRDNPYVSPLRASDQELQGLPPALVITAENDPLRDEGEAYARKLMNAGV
                     AVATARYDGMIHDFVALNALRHLPETVAALQQASDGIREHIGKVAVTQ"
     gene            1014..1739
                     /locus_tag="VHX39_26750"
     CDS             1014..1739
                     /locus_tag="VHX39_26750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HEX3994792.1"
                     /translation="MTNIVPGGKSIYGAPLGILMLEARFPRIPGDMGNGLTWPFPVLY
                     RVVRGATPERVVLQGAAGLLPDFLAAAADLVDLGAEAITTNCGFLSLFQRELAAHVRV
                     PVATSALIQVPWVQATLPPGKRVGVITVSAGSLTPRHLEAAGVPLDTPIAGTETGREF
                     FRVLIKAEKPDLDVDLARNDIIDAGQALLAQHADIGAIVLECTNMPPYAHALREALGL
                     PVFDIYSLISWFHAGLRPRDFSR"
     gene            1921..2874
                     /locus_tag="VHX39_26755"
     CDS             1921..2874
                     /locus_tag="VHX39_26755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008619019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HEX3994793.1"
                     /translation="MSLTRKRILVTGGAGFLGSHLCERLLRDGHDVLCVDNYFTGRKD
                     NILSLLDHPHFEVMRHDITFPLYVEVDEIFNLACPASPVHYQFDPVQTTKTSVIGAIN
                     MLGLAKRVGAKILQASTSEVYGDPTIHPQTEDYRGNVNPLGPRACYDEGKRCAETLFF
                     DYYRQHKTAIKVVRIFNTYGPRMHPNDGRVVSNFIVQALQDKDITLFGDGSQTRAFCY
                     VDDLIEGFVRMMATGAEVTGPINIGNPHEIPVRELAQRVIGLTGAKSRIVHRPLPVDD
                     PVQRCPDITLAGSVLGWKPTVELDAGLARTVDYFRRLLAAS"
     gene            2969..3664
                     /locus_tag="VHX39_26760"
     CDS             2969..3664
                     /locus_tag="VHX39_26760"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3994794.1"
                     /translation="MAHPEQLAFIAMIKAAFPGFFNSGRTLEVGSLDINGSIRRYFES
                     GVYTGIDVAEGPGVDVVCQGQDYDAPDGSFDTVISCETMEHNPFWKETIANMIRVCRA
                     GGLVVMTCATTGRPEHGTTRTEAADSPLTIGLGWEYYKNLTEQDVRQALTMQNLLRPF
                     AFFPNRASYDLYLIGFKRGPSTPPGAKQKIAALQHHYRWANLQVLRQDLKKRLLIRLV
                     GEERYFAGPVRPW"
     gene            complement(3707..4720)
                     /locus_tag="VHX39_26765"
     CDS             complement(3707..4720)
                     /locus_tag="VHX39_26765"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3994795.1"
                     /translation="MPTDGDCRDREKEAPMRISVVVPTYNAPARLQATIHSILAQTAS
                     PHEIIIVDDGSTDDTNRVCAAFGDAIIYLPITNGGQQRARNIGVERATGEWIAFLDHD
                     DLWYRDYLAEVTAFRHQHVFDVVFCNSVTVKEEATGPVVINGNRFIEFSPTDYWQSMQ
                     VDPAARWSVLERYGYAKYLAFHPAQPSVMTIRKDLFQRFGGYDDQMRGSSAENFEFEI
                     RALPSVRVGLIWRPLVTITRHDANASVDGSKMAMDLVNCLRFIQEHHDIGTAERNAVA
                     TELQQRLPDAIDGAFNLRRFPELCDYRAMLAAPPDLKMRVKCGIARLPRFIAAICADA
                     LSK"
     gene            complement(4756..>5635)
                     /locus_tag="VHX39_26770"
     CDS             complement(4756..>5635)
                     /locus_tag="VHX39_26770"
                     /inference="COORDINATES: protein motif:HMM:NF026018.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEX3994796.1"
                     /translation="EYYVWPRLGFAGIGPLFSFGIYRTFEYVVWMVFASADVLIISRW
                     LGPVQLGVYVVASNFAATPLNKIAPIVNATAFPAFALIQERPSEARFYALKAVRMMAA
                     IAVPLFFGLSVTAPEVVDLVFGPNWLAARPVLGVLALAVTFRAILLVVPNFLQGIGDS
                     RASFWCTCVGAVIFPPGFVIGCHWGIVGVAWAWLLGYPIMYAASAMIASRRGGLDTRR
                     LLLAPVQPIAAGAIMMGAVMATRQLLPPTLPELGVLAILAIVGATTYSCVLFVLFRGL
                     AMEMLKIFRRASSPAE"
BASE COUNT         1131 a         1788 c         1654 g         1062 t
ORIGIN      
        1 gtccagcagg acggacaagc ggtgaagctt tatatcatga cgccggacca cgcagccgat
       61 catcccggcg tgctgtattt cattcacggc ggcgtttggc tcgtcggcaa tttccagaac
      121 cacaagcggc tgctgcgcga cctcgtcgtc ggctcgggtc aggtcggcgt attcgtcgag
      181 tataccccgc tgcccgcggc gaagttcccg acgcagatgg aggagagcta cgcgggactg
      241 aagtgggttg ccgctcacgc cggcgagttt ggtgccgacg gcagccgcat cgccgtcgcg
      301 ggcaactcgg tcggcggaga tatgaccgcg gcaatcacgc tgatggccaa ggaccggaat
      361 ggtccgaaga tcgcctatca ggtgctgttc atcccggcca ccgatgcgag cgtcgacact
      421 gcgtcctacc atgagttcgg caccggccgg cttctgacgc gcgcgttcat gaaatacggc
      481 tgggacctct acgctcctga cgcagcgatg cgcgacaacc cgtacgtgtc gccgcttcgg
      541 gcaagcgacc aggaactcca gggcttgccg cccgctctgg tcatcaccgc cgagaacgat
      601 ccgctgcgcg atgaggggga ggcgtacgcg cgcaaactga tgaatgccgg cgtggccgtg
      661 gcaactgctc gctacgacgg gatgatccac gacttcgtag ctttgaacgc acttcggcac
      721 ctgccggaaa ccgtggcggc gcttcagcag gccagcgatg gcattcggga acacatcgga
      781 aaggtcgccg tcacccaatg acaagtcgag tgccggggac cgttgccggt attgggcggc
      841 ggcagtcctt ggcacatgac taccacgcgt tgccacacga agcggtacgc cgtccgaccg
      901 gcgccggcgg ctgaaggcgg actggaagcg ccagatggca gccgatcgaa cgtgccgctt
      961 tcggaccgat atccggtctg cccaacgaag ccaattttcg gcacattcct cccatgacca
     1021 acatcgtccc tggcggcaaa tccatctacg gcgcacccct cggtatcctg atgctggagg
     1081 cccgcttccc ccgcattccc ggcgacatgg gcaacggcct cacatggccg ttccccgtgc
     1141 tgtaccgggt cgtccgcggc gccacgcccg aacgcgttgt ccttcagggc gccgccggac
     1201 tgctgcccga cttcctcgcc gccgccgccg acctcgtcga cctgggcgct gaggcgatca
     1261 ccaccaactg tggcttcctt tctctgttcc aacgcgaact tgccgcccat gtccgggtgc
     1321 cggtcgccac cagtgcactg atccaggtcc cttgggtgca ggcgaccctg ccacccggca
     1381 agcgggtcgg agtgatcacc gtgtccgccg gctcgctgac cccacgccat ctggaagcgg
     1441 cgggcgtccc actcgacacc cccatcgctg gcaccgaaac cgggcgcgag ttcttccgtg
     1501 tgctgatcaa agcagagaaa cccgacctgg acgtcgacct cgcccggaac gacatcatcg
     1561 acgccggcca ggcactgctg gcgcaacacg ccgatatcgg cgcgatcgtg ctcgaatgca
     1621 ccaacatgcc gccatacgcg cacgcgctcc gagaggcgtt gggcctgccc gtattcgaca
     1681 tttattcgct gatcagctgg ttccacgccg gcctgcgccc gcgcgacttc agccgctgag
     1741 ctgcgacggc ctcgcatgac cgccggccgt ggcctgcctg ccgaatctcc atgacctttt
     1801 tgcagaatcg ggcgaataca atgattcagg gataccgacg cgcggacggt tgaaatccgg
     1861 gccgccggtg ctgccgccga ccgacgcctt gccgcgacct gaaacctggg aatcaccgac
     1921 atgagtctga cacggaaacg cattctggtg accgggggcg ccggctttct cggatcgcac
     1981 ctatgtgagc ggctgctgcg agacggtcac gacgtcctgt gtgtcgacaa ttacttcacc
     2041 ggccgcaaag acaacatcct ctctctgctc gatcacccgc atttcgaggt aatgcgccat
     2101 gacatcacgt tcccgctcta tgtcgaggtc gatgagatct tcaatctcgc ctgtccggcc
     2161 tccccggtgc actaccagtt cgatcccgtt cagaccacca agacctcggt catcggcgcc
     2221 atcaacatgc tgggtttggc caagcgcgtc ggcgccaaaa tcctgcaggc gtccaccagc
     2281 gaggtctacg gtgaccccac cattcacccg cagacggagg actaccgcgg caacgtcaat
     2341 ccacttggcc cacgcgcctg ttatgacgag ggcaagcgct gcgccgagac gttgttcttc
     2401 gactattacc ggcagcataa gaccgccatt aaggtggtgc ggatcttcaa tacctatgga
     2461 cctcggatgc atccgaacga tggccgcgtg gtgtccaatt tcatcgtcca ggccttgcag
     2521 gacaaggaca tcacgctctt tggcgacggt agccagacca gggcattttg ttatgtcgac
     2581 gatctgatcg agggcttcgt gcggatgatg gcaaccggcg cggaggtcac cggtccgatc
     2641 aatattggca atccgcatga gattccggtt cgcgaactgg cgcaacgtgt tattggtctg
     2701 accggcgcca aatcgcgcat cgtccatcgt ccattgccgg tggacgatcc ggtacagcgc
     2761 tgtccggata tcactctggc gggctcggta ctgggctgga aaccgacggt tgaactggat
     2821 gccggtctgg cccgaaccgt tgactatttc cgccgccttt tggccgcttc gtgacgatgg
     2881 tcgtcgatgg cggcctgcta ggtacgcaat agccaggcgc ggtctgtcgg tacggcgcgc
     2941 aaagcggcta aacaactgga gctggccttt ggcgcaccct gaacagcttg cgtttatagc
     3001 aatgattaag gctgcattcc cgggcttttt caattcgggg cgcacacttg aagtcggcag
     3061 tttagacatc aacggctcaa tccgccggta cttcgaaagt ggcgtttaca ccgggatcga
     3121 tgttgccgag gggcctggcg tagatgtcgt ctgccagggc caggactatg acgctcccga
     3181 tggtagcttc gataccgtca tctcttgcga aacaatggag cataacccgt tctggaaaga
     3241 gaccatcgcc aatatgattc gagtttgccg ggcgggcggc ctcgtcgtca tgacatgcgc
     3301 aacgacaggt cgtccggagc atggaacgac cagaaccgaa gcagccgatt cgccgctgac
     3361 cattggtttg gggtgggaat actacaaaaa cctgaccgag caggacgtca ggcaggccct
     3421 gacgatgcaa aatctgctca ggcccttcgc attcttcccg aaccgggcat catatgattt
     3481 gtatctgatt ggcttcaaaa gaggtccctc gactccgcct ggcgcaaagc agaagattgc
     3541 tgcgctccag catcactatc gatgggccaa tcttcaggtc ttgcggcaag atttgaaaaa
     3601 gcgattgctc atcaggctgg tcggggagga gcgatatttt gctggtccgg tacggccgtg
     3661 gtaacctcca ttgacttcga accggtcgcc caatcgatgc ggcacctcat ttcgagagag
     3721 catcggcaca aatcgccgca atgaacctgg gtaaccgcgc gatgccgcat ttcacccgca
     3781 tcttcaggtc aggcggtgcc gccaacatcg cccgataatc gcacagctcc gggaaccgtc
     3841 gcaggttgaa cgcgccatcg atcgcatccg gcaggcgctg ctgcaattct gttgcgacgg
     3901 cgttccgctc ggccgtgccg atatcgtgat gctcctgaat gaacctcagg caattgacca
     3961 ggtccattgc cattttgctg ccatcgacac tggcattcgc gtcgtggcga gtgatggtca
     4021 ccaaaggtcg ccaaatcagc ccgacgcgta ccgatggtaa ggctcggatt tcgaactcga
     4081 aattttctgc gctgctgccg cgcatttggt cgtcatatcc gccaaacctt tggaacagat
     4141 ctttgcgaat ggtcattacc gacggctgcg ccggatgaaa ggcgagatat ttcgcgtaac
     4201 cataacgttc cagcacgctc caccgagcag cgggatcgac ctgcatgctt tgccaatagt
     4261 ccgtcggcga aaattcgatg aagcggttgc cattgatgac gaccgggccg gtggcttcct
     4321 cctttacggt tacactgttg cagaacacca catcgaacac atgttgatgc cgaaacgcgg
     4381 tcacctcggc gaggtaatcg cgataccaaa gatcgtcgtg atcgaggaac gcgatccact
     4441 ccccggtggc tcgttccacg ccgatattcc gggcacgctg ttggccacca ttggtgattg
     4501 gcagatagat gattgcgtca ccgaaggcgg cgcagaccct gttcgtgtca tctgtcgatc
     4561 catcgtcaac gatgatgatc tcgtgcggcg atgcggtctg cgccaaaatt gaatgaatgg
     4621 tcgcctgcaa ccgggcgggc gcattgtatg tcggcaccac gacggaaatc cgcatgggcg
     4681 cctctttctc ccggtcacgg cagtcgccat ccgttggcat cccattgtct ccgggcacgc
     4741 cggatcccgg ctgggtcatt cggcaggtga ggaggcgcgc cggaagattt tcagcatctc
     4801 catggcaaga ccgcgaaaca gcacgaacag cacacaacta taggttgtcg caccgactat
     4861 cgcaagtatc gccagaacgc ccagttccgg gagcgtcggg ggtaacagtt ggcgggttgc
     4921 catgactgca cccatcatga tggcgcccgc cgcgatcggt tgcaccggtg ccagcagcaa
     4981 ccgcctcgtg tcgaggccgc cgcgccggga tgcgatcatc gcgctcgccg catacatgat
     5041 cgggtagcca agcagccacg cccaggccac gccgacgatg ccccaatggc agcctatgac
     5101 gaagccgggt gggaagatca ctgccccgac acaggtgcac cagaaactgg ctcgggaatc
     5161 gccgatccct tgcaggaagt tcggcaccac caacaaaatc gcccggaacg tcacggccag
     5221 cgcgagcacg ccgagcaccg gcctggccgc gagccagttc ggcccaaaca ccaggtccac
     5281 cacctcgggt gctgtaacgg acaggccgaa gaacagcggt accgcgatcg ccgccatcat
     5341 ccgcaccgct ttgagagcgt aaaagcgggc ctccgagggc cgctcctgga tcagggcaaa
     5401 cgccgggaac gcggtcgcgt ttacgattgg tgcgattttg ttcaacggcg tggccgcgaa
     5461 attcgacgcg accacataaa cgcccagttg gacgggccca agccaacggc tgatgatcaa
     5521 aacatccgcc gaagcgaaga ccatccagac gacgtactca aacgtgcggt aaatgccgaa
     5581 cgagaacaac ggtccgatgc ccgcgaagcc caatcggggc cagacgtaat actcg
//
LOCUS       DATAVD010001401         3170 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_880282, whole genome shotgun sequence.
ACCESSION   DATAVD010001401 DATAVD010000000
VERSION     DATAVD010001401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3170
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_880282"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..600)
                     /gene="cyoA"
                     /locus_tag="VHX39_26775"
     CDS             complement(<1..600)
                     /gene="cyoA"
                     /locus_tag="VHX39_26775"
                     /inference="COORDINATES: protein motif:HMM:TIGR01433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009486 - cytochrome bo3 ubiquinol oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0015990 - electron transport coupled proton
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol oxidase subunit II"
                     /protein_id="HEX3994797.1"
                     /translation="MAPIMLTACDPAVLDPRGAIGIADKTILIDSLAIMLAIVVPTIL
                     AILAFAWWFRASNTRATYRPDWEYSGRIELVVWGIPLLVVMLLGGVGWIGSHDLDPAE
                     PLASSAPPLEVQAVSLDWKWLFIYPKQGVASVNQLVVPAGVPIHFSLTSASVMTAFFV
                     PQLGSMIYTMNGMMTQLNLVADAPGTFPGLASHFSGDGFS"
     gene            1083..1544
                     /locus_tag="VHX39_26780"
     CDS             1083..1544
                     /locus_tag="VHX39_26780"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3994798.1"
                     /translation="MAFIRHIAIASEDPAGTAEFYKKHFDLKELFRNPHDTGEDGVWL
                     SDGYIYFAILKHGANTPQLGPEQSSDFCGIHHIGFMVDDQRSKVAELDAANVPHVQNN
                     PAGRRQESLIRNAPNEKFIGPDWVHFDVRDKGWNEAIGSNMQLFELKPAAR"
     gene            complement(1626..2117)
                     /locus_tag="VHX39_26785"
     CDS             complement(1626..2117)
                     /locus_tag="VHX39_26785"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019172 - glyoxalase III activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HEX3994799.1"
                     /translation="MTRFKEDMAAQKHLSQTLRLADMRSEDFDTIFYVGGHGPMWDLV
                     DNPDSIALIESFYNSGKVISAVCHSPAVFHRVRQSGVPVVKGKRVTGFTNGEEEAVHL
                     TNVVPFLVEDELKRVGARYEKAPDWESFAIVDGRIVTGQNPASSTAAAQALVALIARG
                     QAA"
     gene            2260..>3170
                     /locus_tag="VHX39_26790"
     CDS             2260..>3170
                     /locus_tag="VHX39_26790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994800.1"
                     /translation="MADLLEMPLAAGSPGAELLARAQALVPALAERVPAATEARNIPD
                     ATIADFRRAGILRVLQPRRFGGYQESVGVFLHIVEALTEGCASSAWVYGVLGELQWVI
                     ALLPERGQDDVWGNDPEAVAAGSLVPRARAGRCQGGWRVTGRYSFASGCMHAQWIIIA
                     ANCEDAAGNDQPRYLVVPVGEIEIVDDWYSLGMRGTGSRSLLLHDVFVPEHRTVSLRD
                     ILDGTPPGRLVHPDYPLLRSPRYYLVPFVLPAVAFALAWKALALLPPSLHARGMAPSD
                     LLNLQLGEAAALIETANLIFATRRAESV"
BASE COUNT          653 a          971 c          946 g          600 t
ORIGIN      
        1 ggagaagcca tcgccgctaa agtgactggc caggcctggg aatgttcccg gcgcgtcggc
       61 gaccaggttc agttgcgtca tcatgccgtt catcgtgtag atcatgctgc caagctgcgg
      121 gacgaaaaat gcggtcatta cgctcgccga agtcaacgag aaatggatcg gcactccggc
      181 aggaaccaca agttggttta cactcgccac accctgcttc gggtaaatga acagccactt
      241 ccagtccaac gagacggcct gcacctcgag cggcggcgcg ctcgaagcca acggttcagc
      301 gggatcgagg tcgtgggatc cgatccagcc cacgccgccg agcagcatga ccacgaggag
      361 agggatgccc caaacgacaa gttcgatccg ccccgaatac tcccaatccg gacgataggt
      421 cgctcttgtg ttggacgccc ggaaccacca ggcgaaagcc aggatcgcga gaattgttgg
      481 caccacgatg gcgagcatga tggccagcga gtcgatcagg attgtcttat cggcaatccc
      541 gatcgcgcca cgcgggtcga gcacggccgg atcacaggcc gtcagcatga tcggcgccat
      601 gacagcgacg ccggcattcc tcagcggaaa ccgtcgcctg atcctggggg gcttgcgtgg
      661 ccgcacatga gaccaaacca atcgtgccat ggtcagcagt ctatcgcctg attaacgaca
      721 gccgtgcacc ccggccgatt accgaatgag caaagagctt ccgcatgacg cactcctgaa
      781 ttcactcgct tcacgccgag aaccgcacgc gtgccaggac agttcctcag gcctctcgca
      841 cggccgatat taggtcgtcc aggcacgggt gtaatcagtc accgtccggc agacagtctt
      901 ccaaagggcg gttgaatgaa attactcccc ccggtagtgt ctcgggctgc aacgtctgac
      961 agctcaggac gtcggtcaag aagctgctga gacgccacgg ttggcgcata tctgaagatc
     1021 cggctggcgt ggcaaaatgg caggtttggt tctgacgcaa cgaaaccgga ggagacaaga
     1081 ccatggcgtt tatccgacat attgcaatcg cgagcgagga tccggccggc accgccgaat
     1141 tctacaaaaa gcacttcgac ctgaaggaac tgtttcggaa cccgcatgac accggcgagg
     1201 atggcgtctg gctcagcgac ggctacatct attttgccat cctgaagcat ggcgccaaca
     1261 caccgcagct cgggcccgag cagtcatcgg atttctgtgg catccaccat atcggcttca
     1321 tggtcgacga tcagaggtca aaggttgccg aactcgacgc cgcgaacgtg ccgcacgtgc
     1381 aaaataatcc cgctggccgg cgacaggaga gcctgatcag gaacgctccg aatgagaagt
     1441 tcattgggcc ggactgggtg catttcgacg ttcgtgacaa aggctggaac gaggccatcg
     1501 ggtccaacat gcagctcttt gagctgaagc cagccgcccg ttagcggcga cactgcacgg
     1561 acggcaggtc gcgaaacctg ccgtcccgtt tgcttgcggc aaaaactgct tgaacgtaac
     1621 gaaacctaag cggcctgccc acgtgcgatc agcgcaacga gagcctgagc cgcggcagtc
     1681 gatgacgcag ggttttgccc agtaacaatg cgtccatcga cgattgcgaa actttcccaa
     1741 tcgggggcct tctcatagcg ggcgcccact cgcttcagct catcctcgac gaggaatggg
     1801 acaacgtttg tcaggtggac agcctcctcc tcaccgttgg taaaaccagt cacgcgtttg
     1861 cccttcacga ccggcacgcc gctttgcctg acccgatgaa acactgccgg cgaatgacag
     1921 acggcggaga tgaccttgcc ggaattatag aacgactcga tcaaggcaat tgaatcggga
     1981 ttatcgacaa gatcccacat tgggccgtgg ccgccaacat agaatatcgt atcgaaatct
     2041 tccgatctca tatcggcgag cctgagggtc tgggaaaggt gcttttgcgc cgccatatcc
     2101 tccttgaagc gcgtcatcgc aggcgtctga ccttctgcaa gatcgctctt cggatcgatc
     2161 gcctgatttg cacgtcatgt gattcgcgac atccgacggc ctgcgttgac accgtcgttg
     2221 ccatgccgaa gggtccaatc tccggaacag gggaacgcca tggccgacct gcttgaaatg
     2281 ccgttggctg ctggctcgcc tggcgctgaa ctgttggcac gcgcgcaagc gctggtgccg
     2341 gccctggcag agcgtgtgcc ggccgccact gaggcgcgaa atattcccga tgcaacgatc
     2401 gccgacttcc gccgtgccgg catattgcgt gttctgcaac cgcgacggtt cggcggatat
     2461 caggaatccg ttggcgtatt tcttcatatc gtcgaggcgc tgaccgaggg atgcgcctcg
     2521 agcgcctggg tttacggcgt gcttggcgaa ctgcaatggg tcatcgcgct gcttccggaa
     2581 cgcggtcagg acgacgtctg gggcaatgac ccggaggcgg tggcggcagg cagcctcgtg
     2641 ccgcgcgcac gggctgggcg atgtcagggg ggatggcgag tgaccggccg ttactcgttt
     2701 gccagcggct gcatgcacgc gcagtggata atcatcgctg caaactgcga ggatgccgca
     2761 ggcaacgacc agccgcgcta cctcgtggtc ccggtcgggg aaatcgagat cgtcgatgac
     2821 tggtattcac tgggcatgcg cggtaccgga agccgcagcc tcttgctgca cgacgtcttc
     2881 gtccccgagc accggaccgt ttcattacgc gacattcttg acggcacccc tcctggccgg
     2941 ctggtgcacc cggattatcc gctgctgcgg tctccgcgtt actacctggt cccgttcgtt
     3001 ttgccggcag tggctttcgc cctcgcatgg aaagcgttgg ccctgctgcc gccatcgttg
     3061 catgcgcgcg gcatggcgcc gtccgatcta ttgaacctgc aactcggcga ggccgccgcc
     3121 ctcatcgaaa ccgccaatct gatttttgcc acccgccggg cggaaagcgt
//
LOCUS       DATAVD010001402         3293 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1994126, whole genome shotgun sequence.
ACCESSION   DATAVD010001402 DATAVD010000000
VERSION     DATAVD010001402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3293
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1994126"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1985)
                     /locus_tag="VHX39_26795"
     CDS             complement(<1..1985)
                     /locus_tag="VHX39_26795"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX3994801.1"
                     /translation="MTFRIGIDIGGTFTDLVAITEDDDVTTHKVASTPHDFGEGIIAG
                     IQALLARAPGKVTEILHATTVGSNTVLEASGARTALITTRGFRDILEIRDLRMPVLYD
                     QHWTKPRALVERRLRLEVTEKLRPDGSVSLRLDPVSVAAAIDRLRAEQVESVAICLLH
                     SYANAAHERAVADAVRAALPNIAISVSSEILPEIKEYPRTSTTVINAYVQPVVRAYIT
                     ALDARLRGLGIEAPLQLMQSNGGLASASFAAAAPAHIIESGPAAGVVGAAALARRLSE
                     PGLITFDMGGTTAKAGLVEHGEVIRTEAIEVGGGVMAGSRLLVGAGYMLKLPAIDLAE
                     VGAGGGSICRLDEAGAPKVGPRSAGADPGPVCYGRGGVAPTITDCNLVLGYLDPGGLI
                     GGELKLDRDAAAAAIARDLAGPLGLPVEEAAFGMLRLAAATMMRAIRAVSVERGRDPR
                     KFALLAFGGNGPLFAAGIAQELGIERVVVPPLPGVFSAFGLLVADTEHHTSQSLRARL
                     DAVEPERIDAVLDGLAKAGAEQLTRDGFSSERQSFRRSAQARYLGQSSEIEVPLPDGP
                     VSPERIATLFGEQHERIYGFRAPPEEKVELVGLSGMARGLPVRPRLPDRIPPLAAAVP
                     PARRAWFAGDGWIETPVVDRAGLGDVARDGPLIVQEY"
     gene            complement(1982..>3293)
                     /locus_tag="VHX39_26800"
     CDS             complement(1982..>3293)
                     /locus_tag="VHX39_26800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX3994802.1"
                     /translation="KLYQAGTANATLFRMIERNVRLPGRVFGDIRSQLAACEIAARGM
                     ADLVARYGADDVRQLMIAMMDYSERITRHCLTELPDGDATFTDWIDDDQIDAGVPIKL
                     VCTVRKHGDTMEVDWTGSAAQVKGAINNTLSYTLAMSFTAVKSVLSINMPNNDGVFRP
                     IKVIAPAGTITNGKLPAACAARGLTGFRGVDCCFGALAQLYPDRVMAASDGGNTGLTI
                     GGYDKNLDPFIYVDFISGAWGARPWADGLDGNTCMFANMASFSVEVIETENPLEVLDY
                     EFVPDTGGAGKFRGGMAQRKTWRMLADEGILQVRADRQTHRPYGLQGGGPGAYGRNVL
                     DPGMATEAPLHAKLTMTLRRGQVFRHDLPGAGGHGDALTRDLALAARDLRDGLVTIEG
                     AARDYGVVADGDPPEIDVVATETLRAKLRATRKPLPAVAWEPAA"
BASE COUNT          616 a         1108 c         1003 g          566 t
ORIGIN      
        1 tcgtactcct gcacaatcaa cggcccatcc cgcgcaacgt cgccaaggcc ggcacgatcc
       61 accaccggcg tttcgatcca gccgtccccc gcaaaccatg cacgacgggc cggcggaacc
      121 gcggccgcga gcggcgggat ccggtccggc aaacgcggac gcaccggcaa accgcgcgcc
      181 atgccggaca ggccgaccag ttccaccttc tcctccgggg gagcacggaa accataaatg
      241 cgctcgtgct gttcgccgaa caacgttgcg atccgttcgg gtgaaaccgg cccgtccggc
      301 agcggcactt cgatttcact ggactggccg aggtaacggg cctgcgccga ccgccggaac
      361 gattgccgtt cggacgagaa cccatcgcgg gtcaattgtt cggctcccgc cttggccagg
      421 ccgtccagca ccgcatcgat ccgctccggt tctacggcat cgagacgtgc tcgcaaactt
      481 tggctggtgt ggtgctcggt gtccgccacc agcaggccaa aggcgctgaa cacccctggc
      541 aacggcggca ccacaaccct ttcaatcccc agttcctggg cgatccccgc cgcaaacaac
      601 ggaccattgc cgccgaacgc cagcaacgcg aatttcctcg ggtcacggcc gcgctctacc
      661 gaaacggcgc ggatcgcccg catcatcgtg gccgcggcca gcctgagcat gccgaacgcc
      721 gcttcctcaa ccggcaggcc aagcggaccg gcgaggtcgc gcgcgatcgc tgccgcggcg
      781 gcatcacgat ccagcttcaa ttcaccgccg atcagcccgc cgggatcaag gtagcccagt
      841 accagattgc aatcggtgat ggtcggtgca actccgccgc gaccgtaaca aaccggaccc
      901 ggatcggcac ctgcactgcg cgggcccact ttcggcgcgc cggcttcatc gaggcggcag
      961 atcgagccgc ctccggcacc cacctcggcg aggtcgatgg ctggcagctt caacatatag
     1021 cccgcgccaa ccaacaaccg ggacccggcc atgacaccgc cgccgacttc gatcgcttcg
     1081 gtgcggatga cctcgccgtg ctcgacgaga ccggcttttg ccgtggtacc ccccatgtcg
     1141 aaggtgatca ggcctggttc gctcaatcgc cgagccagtg cagcggcgcc gaccaccccc
     1201 gcggccggtc cgctttcgat gatgtgcgcc ggcgcagcgg cggcaaacga ggctgaggcg
     1261 aggccgccat tcgattgcat caattgcaac ggagcctcga tcccgaggcc gcgcagccgc
     1321 gcatccaacg cagtgatgta ggcgcgcacc acaggctgca cataggcatt gatgacggtg
     1381 gtgctggtgc gcggatattc cttgatctcg ggcaggatct cgctgctgac ggaaatggcg
     1441 atattgggca gcgcggcgcg caccgcgtcg gcgaccgcgc gttcatgcgc cgcgttggca
     1501 taactgtgca gcaagcaaat tgcgacactt tccacctgct ccgcgcgcag ccggtcgatg
     1561 gcggcggcga cgctgacagg atcgagccgt agcgacaccg aaccgtccgg acgcagtttt
     1621 tctgtgacct ccaggcgtag ccggcgctct accaaagcgc gcggcttggt ccagtgctgg
     1681 tcgtacagta ccggcatgcg cagatcgcga atttccagga tatcgcggaa accacgcgtg
     1741 gtgatcagag cagtgcgtgc gccgctcgcc tccaacacgg tgttcgagcc gacggtggtg
     1801 gcgtgcaaaa tttccgtcac cttgcctggc gcgcgagcca gcagcgcctg aattccggcg
     1861 atgatcccct cgccaaagtc atgtggcgtg gaggcgacct tgtgggtcgt gacatcgtcg
     1921 tcttcggtga tggcaacaag gtcggtaaaa gtgccgccga tgtcgatgcc gatccgaaag
     1981 gtcatgccgc gggctcccag gcaaccgccg gcaacggttt gcgtgtggct cgcagttttg
     2041 cccgaagtgt ttcggtggcg acaacgtcga tctcgggcgg atcgccgtct gcgacgacac
     2101 cgtagtcgcg cgcggcgcct tctatcgtta ccaatccgtc acgcaaatcg cgggccgcca
     2161 gcgcgagatc gcgggtcagt gcatcgccat ggcctccggc accaggcaga tcgtgccgga
     2221 acacctggcc gcgccgcagg gtcatggtca atttggcatg gaggggtgct tcagttgcca
     2281 tcccgggatc gaggacgttg cggccataag cgcccggccc cccgccttgc aggccgtacg
     2341 gacgatgggt ctggcgatcg gcgcgtacct gcaaaatgcc ctcgtcagcg agcatccgcc
     2401 aggtcttccg ctgtgccatg ccgccgcgga atttgccggc gccaccggtg tccggaacga
     2461 attcgtaatc cagcacttcc agcggatttt ccgtctcgat cacctcaacc gagaaactcg
     2521 ccatattcgc gaacatgcag gtattgccat caagtccgtc agcccatgga cgggcacccc
     2581 aggcgccgga aatgaagtcg acataaatga acggatcgag attcttgtcg taaccaccaa
     2641 ttgtcaggcc ggtgttaccg ccgtcggagg cggccatcac gcggtccggg tatagttgcg
     2701 ccagtgcacc aaagcaacaa tcgacgccac ggaagccggt caacccgcgc gccgcacacg
     2761 cggccggaag cttgccgttg gtaattgtcc cggcgggagc gatcaccttg atcggacgga
     2821 acaccccgtc attattgggc atgttgattg acagcaccga cttcaccgcg gtgaaactca
     2881 tcgcgagcgt gtagctgagc gtgttgttga tggcgccttt gacctgcgca gcactgccgg
     2941 tccaatcgac ctccatcgta tcgccgtgtt tgcgaaccgt gcagaccagc ttgatcggca
     3001 cgccggcatc gatctggtcg tcatcgatcc aatcggtaaa cgttgcatca ccgtcgggaa
     3061 gttcggtcag acaatggcgg gtgatgcgct cggagtaatc catcatcgca atcatgagct
     3121 gtcggacgtc atcggcaccg taacgtgcca ccagatccgc catgccgcgc gccgcaattt
     3181 cgcacgcggc aagctgcgat cggatgtcgc cgaacacccg gcccggcaaa cgcacattgc
     3241 gttcgatcat gcggaacaac gtggcgttgg cggtgcccgc ctgatacagt ttc
//
LOCUS       DATAVD010001403         2221 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1994156, whole genome shotgun sequence.
ACCESSION   DATAVD010001403 DATAVD010000000
VERSION     DATAVD010001403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1994156"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            699..953
                     /locus_tag="VHX39_26805"
     CDS             699..953
                     /locus_tag="VHX39_26805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008942692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEX3994803.1"
                     /translation="MPAWPVQDAKARFSEMLDNCLNEGPQVISRRGVAEAVLVPIDQW
                     RRLHGDAPTLKDLLLSDHARTDIPVPARGARRRRAAVVFD"
     gene            957..1364
                     /locus_tag="VHX39_26810"
     CDS             957..1364
                     /locus_tag="VHX39_26810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008942691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEX3994804.1"
                     /translation="MFLIDTNVVSELRKPRPHPLVVTWLRGVSDRDLYLSAVTVGELQ
                     AGVEVTRRQDKVKAAEIEAWIDQVAGAWNVLPVDARIFRYWARLMHGRSDNLIEDAMI
                     AATAHVHGLVVVTRNIRDFEALGIPTLDPFAAV"
     gene            1403..1753
                     /locus_tag="VHX39_26815"
     CDS             1403..1753
                     /locus_tag="VHX39_26815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994805.1"
                     /translation="MRIHNLYEDTEGVSHFRDIDVAWDEVRQSNKFSAREAASGIVFR
                     ETTKDYTVDWHPAPRRQYVINLDSAVHITAGDGETRYVGPGEVVLVEDTTGKGHISKF
                     VGGAMRRSIFVALD"
     gene            1760..>2221
                     /locus_tag="VHX39_26820"
     CDS             1760..>2221
                     /locus_tag="VHX39_26820"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3994806.1"
                     /translation="MYLNKFADGSAPEDLTGTDEFRSLLTSATDLKIPHSPAIKYSSC
                     NIVLRRQRFHFLQWGDPDAPPVVLLHGGHQSAHSWDLVSLHLAQNHHVLALDQRGHGD
                     SEWARDVEYSNHTMALDALAFLDAMGLQKPILIGHSMGGRNSMILTKQDPSR"
BASE COUNT          459 a          675 c          656 g          431 t
ORIGIN      
        1 atagtttcgt tgaattaccc accactcctg ggcatggcat cgatctggac gtcgcgaagt
       61 tacgggcaaa gccgtatcgc gacatggggg cgcggaccgg gaagtcgttg cgcagctaca
      121 ccgaggagtt tccgcgcaaa cattatcagg tcgccgcaac ccgtaccgga tactgaaaca
      181 gtcgcacaaa actcggtgtg accgcaaagg acagtccggc ggccgatcga ctcctgaatg
      241 cgctgtgcag tcactgttcc gcaaacctgg aaggtagccg aagtcttacg atcgggcggc
      301 gacgcaacga tgtgcgttaa tctgtgtgca tctgtttgca tctgcgttta aatactttcg
      361 cgcaaccaag accgcccctg tcaggcacgg gaacagccaa ctgcaatgcg tcggcttagt
      421 aaaggaaacc gcagatacac gcggattggg ccggcggcgc gcgccggcgt gggcagcttc
      481 caatccgctt gccgaattcg atacaaccgg cacaggccgg aaaaaccgac gccgggtcat
      541 cgctagcctg cccagtccag cgatgtccat ccgacgtgag ggcaagtcgg gaagatttcg
      601 cttgaatttg cccatatgac cagttatatg accagtcatc catgagccca aaatactccg
      661 ttccccgtta accagatatc aagcgtcagg agctacccat gccggcctgg cccgtgcagg
      721 acgccaaagc gaggttcagt gagatgttgg acaactgcct caacgaaggc ccgcaagtga
      781 tcagccgccg cggcgtcgcc gaggcggtcc tcgtccctat cgatcaatgg cgccgcctgc
      841 atggcgatgc gccgacgctg aaggacttac tgctttccga ccacgcccgc accgatatcc
      901 ctgtccccgc ccgcggagct cgccgccggc gcgcggccgt ggtgttcgat tgagcggtgt
      961 tcctgattga caccaatgtg gtgtccgagt tgcggaagcc ccgcccgcat cctttggtcg
     1021 tcacgtggct gcgtggagtc tccgaccgtg acctgtatct ctcggccgta acggttggcg
     1081 aactacaagc cggggttgag gtcacccgcc ggcaggacaa ggtcaaggct gctgaaatcg
     1141 aggcctggat cgatcaggtt gccggcgcct ggaacgtcct gccggtggat gccaggattt
     1201 tccggtactg ggcgcgtctg atgcatggcc gatccgataa tttgatcgaa gatgcaatga
     1261 ttgccgcgac cgcgcatgtc cacggtcttg tcgtcgtcac gcgcaatatc cgcgacttcg
     1321 aagcgcttgg catcccgacc cttgacccct tcgcggcggt ctgatcccct accacgggcg
     1381 taaggccggg gggagcagca gcatgcgcat tcacaacctg tatgaggaca ccgaaggcgt
     1441 atcgcatttc cgcgacatcg acgtagcgtg ggacgaagta cgccaatcta acaaattctc
     1501 tgcccgcgag gccgcttccg gcatcgtgtt ccgtgaaacc accaaggatt acaccgtcga
     1561 ttggcatccc gcgccgcgcc ggcaatacgt gatcaatctc gacagtgcgg tgcacatcac
     1621 tgccggcgat ggcgagaccc ggtacgtcgg acccggtgag gtcgtgctgg tggaagacac
     1681 taccggcaaa ggtcatatct ccaaatttgt cggcggtgcc atgcgccggt cgatctttgt
     1741 ggcactggat taaggcagca tgtatcttaa caagttcgcc gacggctcgg cacccgagga
     1801 cctgaccgga acggatgagt ttcgcagcct gctgaccagc gcgaccgatc tgaagatccc
     1861 ccattcgccg gcgattaaat acagttcgtg caatatcgtg ctgcgccgcc aaaggttcca
     1921 ttttctgcaa tggggcgatc ctgacgcgcc gccggtcgtg ttgctgcatg gtgggcacca
     1981 gtcagcgcat tcatgggacc tggtcagcct ccacctggca caaaaccatc acgttctggc
     2041 attggaccag cgtggtcacg gcgacagcga gtgggcgcgc gacgttgaat actcgaacca
     2101 taccatggcc ttggacgcac tggcgttcct cgacgcgatg gggttgcaaa agccaattct
     2161 gatcggccat tcgatgggcg ggcgcaacag catgatcctg acaaaacagg acccgtcgcg
     2221 g
//
LOCUS       DATAVD010001404         3274 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1622831, whole genome shotgun sequence.
ACCESSION   DATAVD010001404 DATAVD010000000
VERSION     DATAVD010001404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3274
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1622831"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..220
                     /locus_tag="VHX39_26825"
     CDS             <1..220
                     /locus_tag="VHX39_26825"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="catalyzes the formation of
                     tetrahydropteroyl-L-glutamate and methionine from
                     L-homocysteine and
                     5-methyltetrahydropteroyltri-L-glutamate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HEX3994807.1"
                     /translation="DVLVGVIDIASDRVETPEDVAATIAAAMEFVPPERLFPCTNCGM
                     APMRREIALAKLEALSHGAALARRRLSM"
     gene            337..654
                     /locus_tag="VHX39_26830"
     CDS             337..654
                     /locus_tag="VHX39_26830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEX3994808.1"
                     /translation="MITILFNLAIWVVNLYKWAVIIAAVLSMLTAFGVLDTRNRIVWM
                     INDFFYRITEPALRPIRSMLPIFGGIDLSPWVLVVLLIILEEILIRLEQSIIFGTLRP
                     LLI"
     gene            690..950
                     /locus_tag="VHX39_26835"
     CDS             690..950
                     /locus_tag="VHX39_26835"
                     /inference="COORDINATES: protein motif:HMM:NF014633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 domain-containing protein"
                     /protein_id="HEX3994809.1"
                     /translation="MVKVQPRSRRPGVQGVGESAGGPRLRIGVVEAAEDGKANRAVCA
                     LLAHVLHRPQSAVQIIAGAANREKLLSVTGDAATLVDLLRVL"
     gene            947..1810
                     /gene="folD"
                     /locus_tag="VHX39_26840"
     CDS             947..1810
                     /gene="folD"
                     /locus_tag="VHX39_26840"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEX3994810.1"
                     /translation="MTARLIDGKAVAAALRASVAARVATLSYRPGLAVILLGDDPASE
                     TYVRNKDKAAAQAGINAQTIRLPENTAQSALLERIDTLNSDPAVDGILIQLPLPPHID
                     AGVVVEAVDPEKDVDGFHPVNVGRLASGRTGLVPCTPLGVMRLLEHAKVTLSGARALV
                     LGRSAVVGRPLVGLLLAADATVTVAHSHTKDLVDECRRAEILIAAIGQPQQVRGNWIR
                     PGATVIDVGINRLPDGRLVGDVAFDECAAVAGAITPVPGGVGPMTIACLLENTLSAAE
                     RRRPPKGLVSG"
     gene            complement(1800..2498)
                     /locus_tag="VHX39_26845"
     CDS             complement(1800..2498)
                     /locus_tag="VHX39_26845"
                     /inference="COORDINATES: protein motif:HMM:NF017102.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004040 - amidase activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HEX3994811.1"
                     /translation="MADRVAFADQTTVWASPQTSAADAFGTTGDLQCVPFARLLSGIG
                     IHGDAWTWWDKASGLYARGNHPEAGAVLSFPGIERMPLGHVAVVTQVLGARKILIDHA
                     NWPNAIEEHGAISRDIQVEDVSADNDWTAVRVQFGEGGPMGSIYPANGFIYGWNDTGV
                     RIAQSRISPEERNRAAGVNSSRPRPLLVLRVPAGSLLNTRGLVQPLGVSRLSAGRPGF
                     AMSRYEVKWASLSR"
     gene            3045..>3274
                     /locus_tag="VHX39_26850"
     CDS             3045..>3274
                     /locus_tag="VHX39_26850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994812.1"
                     /translation="MPTRPFRLVTMLMLGVLLSGGTAAASTVEGTWIVKDNVALNIFE
                     CGGRFCARIAWVKDVARRATQCGRTIVWGLQPT"
BASE COUNT          586 a          998 c         1071 g          619 t
ORIGIN      
        1 ggatgtgctg gtaggggtca tcgacattgc ctccgaccgg gtcgaaacgc cggaggacgt
       61 cgcggcaacg atcgcggcag caatggaatt cgtgccgccg gagcgtttgt tcccctgcac
      121 caactgcggc atggcgccga tgcgtcgcga aatcgccctg gccaagctgg aggcgctgag
      181 ccacggtgca gcattggcgc ggcgacggct gagtatgtag gtcggctcac gtcatccccc
      241 gacttgttcg ggggatgacg ctgagaggca agcagtcatg gttgcggcgc gtaaacgccg
      301 ccgctagctt ccgccggtgt ctggagcgag gccggtatga ttacgatcct gttcaatttg
      361 gccatatggg tagtcaactt atacaaatgg gcggtcatca tcgcggcagt cctcagcatg
      421 ctcaccgcgt tcggcgtgct cgacacacgc aatcgcatcg tctggatgat caacgacttc
      481 ttctatcgca tcaccgagcc cgcgctgcgt ccgatccgca gcatgctgcc catcttcggc
      541 ggcatcgatc tcagcccctg ggtgttggtt gtgctgctga tcattctcga ggagattctg
      601 atccggctcg aacagtcgat cattttcggc actctgcgcc cgctgctgat atgagtttct
      661 ggcgtgaggc cacggacggc gtgaccatca tggtgaaggt gcaacctcgg tcgcgccgcc
      721 caggagtgca gggggtcgga gagtcggcgg gaggaccgcg gttgaggatt ggcgtggtcg
      781 aggccgccga ggacggcaaa gccaaccgcg ccgtgtgtgc tttgttggcg catgtactgc
      841 atcgtccgca atcggcggtg cagattatcg ccggcgccgc gaaccgtgag aaattactgt
      901 cggtgacggg cgacgcggcc actcttgtcg acctgttgcg ggtgttatga ctgcgcgtct
      961 gatcgatggg aaagccgttg ccgctgcgct gcgcgccagc gtcgcggctc gggttgcgac
     1021 cctgtcctac cgtcccggcc tcgccgttat tctcctgggc gacgacccgg ccagcgaaac
     1081 ctatgtccgc aacaaagaca aggcggccgc gcaggccggg atcaacgcgc agaccatccg
     1141 gctcccggaa aacacggcgc aatcggcgtt acttgagcgg atcgacacgc tgaattccga
     1201 cccggcggtg gacggcattc tgatccaatt gcccctgccg ccgcacatcg atgccggcgt
     1261 ggtcgtcgaa gcggttgatc cggagaaaga tgtcgatgga tttcatccgg tcaatgttgg
     1321 acgtcttgcc tcggggcgta cgggcctggt cccgtgcacg ccgcttgggg tgatgcggct
     1381 gctggaacac gccaaagtga cgctcagcgg tgccagagca ttggtactgg gtcgctccgc
     1441 agtcgtgggt cgtccgctgg tcggattgct gctcgctgcg gatgcgacgg tgaccgtcgc
     1501 gcactcgcac accaaggacc tcgtcgatga gtgccggcgt gcagaaatcc tgatcgccgc
     1561 cattggccag ccgcagcagg tacgcggtaa ttggatcagg ccaggtgcga cagtcatcga
     1621 cgtggggatc aaccggctgc cggatggcag gctggtgggc gacgtggcgt tcgacgagtg
     1681 cgccgcagtg gcgggagcga tcactccggt gccgggaggc gttggaccga tgacgatcgc
     1741 ctgcctgctg gaaaacacgc tgtccgcggc ggaacggcgg cgcccgccga aagggctggt
     1801 cagcggctaa gagaggccca cttcacctcg taacggctca tggcaaatcc aggtcgcccg
     1861 gcgctcagtc ggctcacacc cagcggctgc accaggcctc tggtgttcaa cagtgagcct
     1921 gcaggtactc gcagtaccag gagaggcctg ggacgcgacg aattaacacc ggcggctctg
     1981 ttccgctcct ccggcgaaat ccgcgattgc gcgatccgaa ccccggtgtc gttccagccg
     2041 taaatgaagc cgttggcggg atagatcgag cccatcggcc cgccctcgcc gaactgcacc
     2101 cgcactgcgg tccagtcatt gtcggccgag acgtcctcta cctggatgtc acgcgagatt
     2161 gcgccatgct cctcgatcgc attgggccag ttggcgtgat cgatcaggat tttgcgggcg
     2221 ccgaggacct gggtcaccac cgcgacatgg ccaagcggca tgcgctctat tcccggaaat
     2281 gacagtacgg cgcccgcctc cggatgattg ccccgggcat agagaccgga ggctttgtcc
     2341 caccatgtcc aggcgtcacc gtgtatcccg atcccggaca gcaaacgggc aaagggaacg
     2401 cattgcaggt cgcccgtcgt gccgaacgcg tccgctgccg aagtttgcgg cgaggcccag
     2461 acggtggtct ggtcagcaaa ggcgacgcgg tcggccaccg ctccggcacg gggcgggatg
     2521 atccacctcg ggtgcgcaac gggacctggc tgtcccgtcg cacctggtgt ttccgcccgc
     2581 gaagctgcgg cgaatgcaaa gagccccagc acaacgaata ctgcaaagac ggagatgcgc
     2641 cgctgtagca gggttccctc ccccgaactg gactttgatt gtatggacag gaagttaaca
     2701 gcgctggacg gtacctgaca acccggggcg gactatttga cgccggattc cggccgacct
     2761 gacctgggcc tcacgttcgt gccggcccac ggagactggt tgccggaagc gggcaaactt
     2821 cgagccggtc gtcgtgtctg ggttcgttgc gtggctggta cagtgccgga tgtgatgcgg
     2881 gctgccgggc gagccgcgca gtcgtttccg tacctcccgg attccgtgcc gctccgccac
     2941 gtgcgcaatt ccggatcagt gtgttgtgca acacgcgctc tcccgagcgt tagccatata
     3001 ccgaagtatc acgttgaaac catgactaac cgggatgaac gtcaatgccg accagaccct
     3061 ttcgcctcgt caccatgttg atgttgggtg ttttgctatc aggcgggaca gccgcagcct
     3121 cgaccgtcga aggaacatgg attgtaaagg acaacgtagc gctgaatatt ttcgaatgtg
     3181 gaggccgctt ctgcgctcga attgcctggg tcaaggacgt agccaggcgc gcaactcaat
     3241 gcggcaggac aattgtctgg ggacttcagc cgac
//
LOCUS       DATAVD010001405         2691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_505447, whole genome shotgun sequence.
ACCESSION   DATAVD010001405 DATAVD010000000
VERSION     DATAVD010001405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2691
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_505447"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..982)
                     /locus_tag="VHX39_26855"
     CDS             complement(<1..982)
                     /locus_tag="VHX39_26855"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010514246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex E1 component
                     subunit beta"
                     /protein_id="HEX3994813.1"
                     /translation="MATQILMPALSPTMTEGKLARWLKNVGDDVKAGDVIAEIETDKA
                     TMEVEAVDEGKLARILVEEGTEGVAVNTPIAVLGADGEDTSAAPAPAPAPAAAKQPEA
                     PPAAKPREAAAPAAGPEKDWGPTKPITVREALRDAMALEMRRDADVFLIGEEVAQYQG
                     AYKISQGLLDEFGARRVIDTPITEHGFTGMSVGAALNGLRPIVEFMTFNFAMQAMDQI
                     INSAAKTLYMSGGQMGCPIVFRGPNGAASRVGAQHSQCYASWYAHVPGLKVVSPWSSA
                     DAKGLLRSAIRDPNPVIILENEILYGQTFDCPIDDDFIVPIGKAKIERVGQ"
     gene            complement(986..1996)
                     /gene="pdhA"
                     /locus_tag="VHX39_26860"
     CDS             complement(986..1996)
                     /gene="pdhA"
                     /locus_tag="VHX39_26860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HEX3994814.1"
                     /translation="MAQAAEAKKRGKTKDKTVDRDVLLKAYRTMLLIRRFEEKAGQLY
                     GMGLIGGFCHLYIGQEAVVVGMQLAISDGDEVITSYRDHGHMLATGMEARGVMAELTG
                     RSGGYSHGKGGSMHMFSKEKNFFGGHGIVGAQVSLGNGLAFSNWYRGNDRVALTYFGE
                     GASNQGQVFESFNIAALMKLPTVFVIENNKYGMGTSVERASASHDLSKNGAPWGIAGA
                     QVDGMDVLAVKEAADVAVAACRAGKGPYLLEVKTYRYRGHSMSDPAKYRTREEVQMMR
                     TQHDCIENARHRLEALDVDEKTFKSIDDEIKAIVQDAADFAQSSPEPELSELFTNVLV
                     EG"
BASE COUNT          450 a          918 c          771 g          552 t
ORIGIN      
        1 gctgaccgac acgctcgatc ttcgccttgc cgatcggcac gatgaaatcg tcatcaatcg
       61 ggcagtcgaa agtctgccca tacaggatct cgttttccag tatgatcacc gggttcggat
      121 cgcggatcgc cgaccgcagc agccccttgg catccgccga cgaccacggc gacaccactt
      181 tcagccccgg cacgtgggca taccagctcg catagcactg cgagtgctgc gcgccgaccc
      241 gagacgccgc cccgttcggc ccgcggaaca cgatcgggca ccccatctgc ccacccgaca
      301 tatacagcgt cttggcggcg ctgttgatga tctggtccat cgcctgcatg gcgaagttga
      361 aggtcatgaa ctcgacgatc ggccgcaatc cgttcagcgc ggcgcccacc gacatgccgg
      421 taaacccatg ttcggtgatc ggcgtgtcga tcacgcggcg agcgccgaat tcgtccagca
      481 ggccctggct gattttgtag gcaccctggt actgggcgac ctcctcaccg atcaggaaca
      541 cgtccgcatc gcgccgcatc tccagcgcca tggcatcccg caacgcctcg cggacggtaa
      601 tcggcttggt cggtccccaa tctttctccg gaccggctgc cggcgccgct gcctctcgcg
      661 gcttcgcagc cggcggagcc tcgggttgct tggcggccgc tggcgccgga gcaggcgccg
      721 gcgcagcgct ggtatcttcg ccatccgcac ccagcacggc gatcggcgtg ttgaccgcga
      781 cgccttcggt gccctcctcg accaggatgc gggccagctt gccctcatcc accgcctcga
      841 cctccatggt ggccttgtcg gtctcgatct ccgcgatgac gtcgccggcc tttacgtcgt
      901 caccgacatt cttcagccaa cgggccaact tgccctcggt catcgtgggc gacaaagccg
      961 gcatcaggat ctgagtagcc atcgctcagc cctccaccag cacattggtg aagagttcgg
     1021 acaattccgg ctccggactg ctctgagcga aatcggcggc atcctggacg atggccttga
     1081 tctcgtcatc gatcgatttg aaggtctttt cgtccacatc aagcgcttcc agacgatggc
     1141 gggcgttctc gatgcagtcg tgctgcgtgc gcatcatctg cacctcctcc cgcgtccggt
     1201 atttcgccgg gtccgacatc gagtggcccc ggtaccgata agtcttcacc tccagcaaat
     1261 aaggcccctt gcccgctcgg caggccgcaa ccgcgacatc ggccgcttcc ttcaccgcca
     1321 gcacgtccat cccgtcgacc tgcgccccgg caatgcccca cggcgcgccg tttttcgaca
     1381 gatcatggct ggccgaggcc cgctccaccg aggtccccat gccgtatttg ttgttctcga
     1441 tgacgaacac cgtgggcagc ttcatcagcg cggcgatatt gaagctttcg aacacctggc
     1501 cctggttgga cgcgccctca ccgaaatagg tcagggcgac ccggtcatta ccgcgatacc
     1561 agttgctgaa cgccagcccg ttccccaggc tgacctgggc gccgacgatg ccatgcccgc
     1621 cgaagaaatt cttttccttg ctgaacatat gcatcgaccc gcccttgccg tgcgaatacc
     1681 cgcccgaccg cccggtcagc tccgccatca cgccgcgcgc ttccatgccg gtggccagca
     1741 tatggccgtg atcgcggtag gatgtgatga cctcatcgcc gtcgctgatc gccagttgca
     1801 tgcccacgac aacggcttcc tggccgatat acagatggca gaacccgccg atcaggccca
     1861 tgccatacag ttggccggcc ttctcctcga accggcggat cagcagcatt gtgcggtagg
     1921 ccttcagcag gacgtcccga tcgaccgtct tgtccttggt cttgccgcgt ttctttgcct
     1981 cggctgcctg cgccatgtcg acgtcccccg cttcggttgc cagtccggtt ggtggctgag
     2041 tagcggtata tcggcaggtt cgacaagcat accagggcag aaaagataga tggtgcaacg
     2101 caataggtat tgttaaccag attgtggtta actgcttgtg gtgctgacgt tcaggccgtg
     2161 atcccggcgg ttcgcgttgc gcggcgtgga ccctggacga aagattattt cgtcagtcca
     2221 gggttattcg cagagacgtt gccctcatcc gtctggggaa cccgggcgcc ggatattggc
     2281 tggcggtccg ctgcctcatc gttcgtctcc ggggcggaag ttgggccggg ggcttctaac
     2341 gcacggggga ggaatagggt cacaaaatgc cacggggcgt ttgatgttgt atcgcgtgcc
     2401 aggcccaagc gaggcgcttg atcggtccgc tgatcccttc tacccggttc cagcccgttt
     2461 tccgttttcc cttaaaaatc gcctggcctt gacgccccat tccttttccc gcgacttcca
     2521 gggtcgcgat ccacgccgaa gcctttgatc ccgacaatcg ggtctgagcg atgtcgtcca
     2581 atttgatcgg accctcggcc tcgcgcgcac aggcatgccg gttcccggta ctggaagaac
     2641 gcccccgtct gctgcgcgtc caggcggtac catgtcagca ttacagtccg g
//
LOCUS       DATAVD010001406         3547 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_880514, whole genome shotgun sequence.
ACCESSION   DATAVD010001406 DATAVD010000000
VERSION     DATAVD010001406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3547
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_880514"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(136..1014)
                     /gene="serB"
                     /locus_tag="VHX39_26865"
     CDS             complement(136..1014)
                     /gene="serB"
                     /locus_tag="VHX39_26865"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HEX3994815.1"
                     /translation="MTHILTLVAARHATSLAANLIAQIRDMTGGGAMTQLSPGEAADI
                     VCATAPDLDQIREIVAGAPIDAIAMPAEGRRKRILIADMDSTIITGETLDELAAHAGV
                     GEKIAAITARAMNGELDFQDALRERVAMLKGLSVAALERTWQGVRLTPGALELVATMK
                     AHGAFTALVSGGFSFFTSRVAARAGFDMHRSNTLLDDGTTLSGLVAEPILDRSVKLAT
                     LHEVTARHGLPLAAALATGDGANDLDMLQAAGLGVAFHAKPIVAAATQARVDHADLRA
                     LLFAQGYPASAFASVD"
     gene            complement(1091..1375)
                     /locus_tag="VHX39_26870"
     CDS             complement(1091..1375)
                     /locus_tag="VHX39_26870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994816.1"
                     /translation="MVEPVSLNTARDDTLWAVVASMGRTTRVAEIFSNHLAALADKAW
                     REQQVRAYENFLRTSRQPAPSYHVRPIKRAELPRSWRPLPALGFLHGKFV"
     gene            1663..2871
                     /locus_tag="VHX39_26875"
     CDS             1663..2871
                     /locus_tag="VHX39_26875"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3994817.1"
                     /translation="MARPGPLTGLKVVELGHYIAAPFCTRILADLGAEVIKVEPPGGD
                     PFRGWGEAKDGHSVWFSVHGRNKLSIELDLKRDRGTMLKLAARADVLVENMRAGQLER
                     LRIGPDVLHEVNPRLVIARISGYGQDGPYRDKPAFGAIGEAMGGLRHLTGHPAGASEL
                     PPPRCGISVSDDLAGLYAAIGLLSALWERDASGGGHATGKGRIIDVNLVDSVFSLMEG
                     MLPEYALDKRVRQPVGAAIQTASPTNTYPCADGKWLCIAGNSDLIFARLMAAIGRPEL
                     AADPAYATNILRCRNREALDTAIAAWTRTLPAKDAEAILEGAEVPCSRLYDIADCATD
                     PHFLARKAVLAIDDPLIGPTLHPGPAIRMDGEAPEEVVRWTGPAPGAHTDFVLHTLLG
                     LPRGTTVETT"
     gene            2945..3466
                     /locus_tag="VHX39_26880"
     CDS             2945..3466
                     /locus_tag="VHX39_26880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019089729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004040 - amidase activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CHAP domain-containing protein"
                     /protein_id="HEX3994818.1"
                     /translation="MRRFPSLFGLLLTMALAACSGTSDLGRRAPLDCVPFARALSGIN
                     LHGDAAGWWWQADGLYSRGTLPEVGSVMVFAPAPGLPRGHVAVVSQVLSRREILVAQA
                     NWVHHRVTSDQLVVDVSPDSDWTLVRVWWPPSEALGSSAWPVQGFIYSENLTSHQRIK
                     QNIPIAVHAALDD"
BASE COUNT          651 a         1051 c         1203 g          642 t
ORIGIN      
        1 tcgaggcaca acgctcgcag gatcgcaagt cggtgctgat gctgatccag ggacaggacg
       61 gcgtgcgtta tgtgccgctg ccgctgacca agggcggtaa ggactcgaaa ccgggctgaa
      121 cggagccgcc gacgttcagt cgactgaagc gaacgcgctg gccggataac cctgtgcgaa
      181 cagcagcgca cgcagatcgg cgtgatcgac ccgtgcctgc gtggccgccg cgacgatcgg
      241 tttggcgtgg aacgcaacgc caagtccggc ggcttgcagc atatcgagat cgttggcgcc
      301 gtccccggtc gccagtgcgg cggcgagcgg cagaccgtgc cgtgccgtca cctcgtgcag
      361 tgtcgccagc ttgacggagc ggtcgaggat cggctccgcg accaggccgg acagcgtggt
      421 gccgtcatcc agcaaggtgt tcgaccggtg catgtcgaaa ccggcgcgcg ccgcgacccg
      481 gctggtgaag aacgagaagc cgccggagac cagagcggtg aatgcgccat gcgccttcat
      541 cgttgcgacc agctccagcg caccgggcgt gaggcgcacg ccttgccagg ttcgctccag
      601 tgccgcaacg ctgagacctt tgagcatagc cacccgctca cgcagggcgt cctgaaagtc
      661 gagttcgccg ttcatggcgc gggcagtaat ggcggcgatt ttctccccaa ccccggcatg
      721 agcggcaagt tcgtcaaggg tttcaccagt aatgatggtg ctgtccatgt cggcgatgag
      781 tatgcgcttg cggcgtccct ccgccggcat ggcaatggcg tcgatcggag cgcctgcgac
      841 gatttcccgg atttgatcga ggtccggcgc cgttgcgcag acgatgtctg cggcttcccc
      901 gggcgacaac tgcgtcatcg ccccgccacc agtcatatcg cgaatctgag cgatcaggtt
      961 cgcggccagg gatgttgcgt ggcgcgctgc gacgagggtc agaatgtggg tcatacgggc
     1021 gcgaaccatg acggtcgcgg agtgagcggg caagtcagtg cagccgtcgc ccgacctccg
     1081 gagtcaggct ttagacgaac ttcccgtgca ggaacccgag tgcgggcagc gggcgccagg
     1141 agcgcggcaa ttcggcccgc ttgatcggtc tgacatggta gctcggcgct ggctgccgcg
     1201 aggtgcgcag gaaattctcg taggctcgga cctgctgctc gcgccaggct ttgtcagcca
     1261 acgccgcgag atgattggag aatatctcgg cgacccgcgt ggtgcggccc atggaagcaa
     1321 cgaccgccca aagcgtatcg tcgcgcgcgg tgttcaggct gaccggttca accatggcag
     1381 aaaattgacc cggttccgtg ccaaaatcaa gcgctacgcg gcaacaaaaa ccgccgaagg
     1441 agtaaaaaaa ggcggtgcag ccgggggatt ggccgcaccg ccagaaggtg gccacgtctt
     1501 aacggacgtg acttcaggga ggaaacaaga caccggaaaa aagaccggct ccgtgacaag
     1561 gaagctatgg gataactcct gacaaaccgt taaagaattc aataaaatcg gcctttggca
     1621 caaaaaatcg gggcctcgta cgacggtatg aaggagcatt gcatggcgcg tccgggtccg
     1681 ttgaccggct tgaaggtggt ggaactcggc cattacatcg cggcaccgtt ttgtacccgg
     1741 atccttgctg atctcggggc cgaggtgatt aaggtcgagc ccccgggcgg cgatccgttc
     1801 cgcggctggg gtgaggcgaa agacgggcac tcggtctggt ttagcgtgca cggccgcaac
     1861 aagctttcca ttgagctcga tttgaagcgg gaccggggca cgatgctgaa actcgcggcg
     1921 cgtgccgatg tgctggtcga gaacatgcgt gccggccagc tggaacggct gcggatcgga
     1981 ccggacgtgt tgcacgaagt gaatccgcgg ctggtcatcg ccaggatctc cggttacggg
     2041 caggacgggc cgtatcgcga caagccggcg ttcggggcaa ttggtgaggc aatgggcggc
     2101 ctgcggcatc tgaccgggca tcccgcgggt gcctctgagc tgccgccgcc gcggtgcggg
     2161 atttcggtca gcgacgacct ggctgggctc tacgcggcga ttggtctgct ttcagcactc
     2221 tgggagaggg atgcttccgg gggcggtcat gccaccggga aaggccggat catcgacgtc
     2281 aacctggtcg attcggtgtt cagtctgatg gagggaatgc tgccggaata cgcgctcgac
     2341 aagcgtgtgc gacaaccggt cggggcggcc attcagaccg cttcaccgac caacacctac
     2401 ccctgcgcgg atgggaagtg gttgtgtatc gcgggcaatt ccgatctgat tttcgcccgt
     2461 ctgatggccg ccatcggccg gccggaattg gcggcggacc ccgcgtacgc caccaacatt
     2521 ttacgctgcc gcaaccggga ggcgctcgac accgccattg ccgcgtggac tcgtacattg
     2581 ccggcaaaag acgcggaagc aatcctggaa ggcgccgagg tgccgtgctc gcggctatac
     2641 gacattgccg attgcgccac tgacccgcat ttccttgcgc gtaaggcggt actggcgatc
     2701 gacgatccct tgattgggcc gaccctgcat cctggaccgg caatccgcat ggacggcgag
     2761 gcaccggaag aggtcgtgcg ttggactggg ccagcgcccg gtgcgcatac tgatttcgtg
     2821 ctgcacacgt tattgggtct gccgcggggc accaccgtgg aaaccacctg accgccgcga
     2881 aatctgcttg ttttcgccgt aagcggcggc cacggtccgg aggttttcaa tccggcgggg
     2941 cgggatgcgc cgattcccat cgttgttcgg cctgttgctg accatggcgc tcgctgcctg
     3001 cagcggaacg agcgatctgg gccggcgggc accgctcgat tgtgtgccgt tcgcgcgggc
     3061 actgagcggc atcaatctgc acggcgacgc cgcgggttgg tggtggcagg ccgatgggct
     3121 ctacagccgg ggcaccctcc ctgaggtcgg ctcggttatg gtcttcgcgc cggctccggg
     3181 actgccgaga gggcatgtcg cggtggtgtc tcaggtcctg tcgaggcgag aaattttggt
     3241 ggcccaggcg aattgggtgc accatcgggt gacaagcgat caattggtgg tcgatgtgtc
     3301 gcccgattcc gactggaccc tggtccgggt gtggtggccc ccatccgagg ctttgggcag
     3361 ctcggcctgg ccggttcaag gatttattta ttccgaaaat ttaacgagcc atcagcgtat
     3421 caagcagaac atcccgattg ccgtgcacgc ggcgctcgac gactgatcga ggggcacgac
     3481 gcctgcctgt tcttaagtaa tgatccgtgg cctaacaggc tgctgaaaaa acccacaatc
     3541 gcgttga
//
LOCUS       DATAVD010001407         2162 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_880673, whole genome shotgun sequence.
ACCESSION   DATAVD010001407 DATAVD010000000
VERSION     DATAVD010001407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2162
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_880673"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..858
                     /gene="lptD"
                     /locus_tag="VHX39_26885"
     CDS             <1..858
                     /gene="lptD"
                     /locus_tag="VHX39_26885"
                     /inference="COORDINATES: protein motif:HMM:NF016348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0010033 - response to organic substance
                     [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HEX3994819.1"
                     /translation="TNLVRGMPTVGLEYRYPFISVQSWGTQTIEPIAQIIARPKEQQI
                     NKWPNEDSQSLIFDDSNLFKVDKFSGFDREEGGGRANYALSYTAQFNRGGSFNALFGQ
                     SYSLWDNSFAQGGISNTGLDSGLDTTRSDYVARATFQPNSIYKFSSRFRFDNDTFAMK
                     RLELETAANFDRWTVNLMYGDYAAQPDIGFLDRRQGVLAGASVKLDANWVLRGSALYD
                     IVNNKFASNSLGIGYVDDCFIFGLNYITSYSYGTGAPVLNHTIMLQMSLRTLGDTGVS
                     QSLNSSSSH"
     gene            909..1853
                     /locus_tag="VHX39_26890"
     CDS             909..1853
                     /locus_tag="VHX39_26890"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEX3994820.1"
                     /translation="MPKIKLRCKPLRQWLAAIACAAAIIAPNAARAQVVVVANGSPIT
                     AYDIEQRGKLDSAATKKKPDRKEVIQELIDDRLKISRAKLYGLEVGDTEVDAAFGNMA
                     KAQHLTSDQFVQILAHAGVEPTTLKARIRAEITWGQLIRGKFASALEIGDSDITKALQ
                     SRKEDTSDTVGYLYTLYPVIVVIPAGTSQADLENKKREAEGLRGRFLTCKDGLAFARA
                     LRDVAVRDPVTKNSSDLPPALRDLLGTIEIGHLTSPEVTPQGLQMFALCDKKETKTDS
                     PIKVQLRQELFAKRFENEAKKFLDEIRKQAMIEYKENK"
     gene            1850..>2162
                     /locus_tag="VHX39_26895"
     CDS             1850..>2162
                     /locus_tag="VHX39_26895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase"
                     /protein_id="HEX3994821.1"
                     /translation="MNALVQLPLALTLGEPAGIGPDLTLALWRRRVELDLPAFYLIGD
                     MDFLKRRARTLGLDVPMSVVTPAEANGVFERALPIAPLELAVTVAPGKPDATSAPAAI
                     AS"
BASE COUNT          479 a          663 c          608 g          412 t
ORIGIN      
        1 accaatctgg tgcgcggcat gccgaccgtc ggcctggaat atcgttatcc attcatcagc
       61 gtgcagtcct ggggcacgca aacgatcgag ccgatcgctc agatcatcgc gcgcccaaaa
      121 gagcagcaga ttaacaaatg gccgaacgag gactcgcaaa gcctgatctt cgacgacagc
      181 aacttgttca aggtcgacaa attctccggc ttcgaccgcg aagagggcgg cggccgcgcc
      241 aactacgccc tgagctatac cgcgcagttc aaccgcggcg gctcgttcaa tgctttgttc
      301 ggtcaatcct acagcttgtg ggataattca ttcgcgcaag gcggcatcag caataccggc
      361 ctcgacagcg ggctcgatac cacgcgctcc gactacgtgg cgcgcgccac attccagccc
      421 aacagcattt ataaattcag ctcgcgcttc cgtttcgaca acgacacttt tgcgatgaag
      481 aggctggaac tggaaaccgc cgccaatttc gaccgttgga ccgtcaacct catgtatggc
      541 gactatgccg cgcaacccga cattggcttc ctcgaccgcc gccagggcgt gctcgccggc
      601 gcttcggtca agcttgacgc caactgggtt ctgcgcggtt ccgcgctcta cgacatcgta
      661 aataacaaat tcgcctcaaa ctcgctcggc atcggctatg tcgacgattg cttcattttt
      721 ggcctcaatt atataacaag ttatagctac ggaaccgggg cgccggtcct caatcacacg
      781 atcatgctgc agatgagcct gcgtacgctt ggcgacaccg gggtaagtca gtcgctcaac
      841 tcgagcagca gccactgatg cgcgctggcg gagcggccgc cggttcgcca gacgcaatgg
      901 atagcgcaat gccgaagatc aaattgaggt gcaagccttt gcgacagtgg ctggcggcga
      961 tcgcatgcgc cgctgcgatt atcgcgccaa acgccgcaag agcgcaggtc gtggtggttg
     1021 cgaacggctc gccgatcacc gcttacgata tcgagcagcg cggcaaactg gattcggccg
     1081 cgacaaaaaa gaagcccgac cgcaaggaag tcatccagga actgatcgac gaccgtctca
     1141 agatttcacg cgccaagctt tacggcctcg aggtgggtga cacggaagtt gacgccgcgt
     1201 tcggcaatat ggccaaggcg cagcatctca cgagcgatca gttcgtccaa attctagcgc
     1261 acgctggcgt cgaacccacc acgctcaagg cgcgcattcg tgccgaaatc acttgggggc
     1321 aattgatccg aggaaaattc gcctccgctc ttgagattgg tgattccgac atcacgaagg
     1381 cgctgcagtc acgtaaggaa gacaccagcg acactgtcgg gtatctctat acgctttatc
     1441 cggtcattgt cgtgatccca gcggggacga gccaggccga cctggagaac aagaagcgcg
     1501 aggcagaagg cctgcgtggc cgctttctca cctgtaaaga cggtctggca tttgctcgag
     1561 cgttgcgcga tgtggcggta cgcgatccgg tcaccaaaaa ctcgtccgac ttgccgccgg
     1621 ccttgcgcga tttgctcggc accatcgaga tcggccatct gacctcgccg gaggtgacgc
     1681 cgcagggcct ccagatgttc gcgctgtgcg acaagaagga gaccaaaacc gactccccca
     1741 taaaagttca attgcgtcag gagctgtttg ccaagcggtt cgagaacgag gccaagaaat
     1801 ttctggatga aatccgcaaa caggcgatga tcgaatacaa agaaaataaa tgaacgcgct
     1861 cgtgcaactc cctctggccc tgaccctcgg tgagccagcc ggcatcggcc ctgaccttac
     1921 gcttgccctc tggcggcggc gcgtagaact cgacctacct gccttctatc tgatcggcga
     1981 tatggatttt cttaagcgcc gcgcccgcac gctcggcctt gatgtgccga tgtccgtcgt
     2041 cacgccggcg gaggcgaatg gcgtcttcga gcgcgcactg cccattgcgc cgctcgaatt
     2101 ggccgtcacg gtggcgccag gaaaacccga tgccacaagt gcaccggcag cgattgcctc
     2161 ga
//
LOCUS       DATAVD010001408         2789 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2556503, whole genome shotgun sequence.
ACCESSION   DATAVD010001408 DATAVD010000000
VERSION     DATAVD010001408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2789)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2789)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2789
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2556503"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..576
                     /locus_tag="VHX39_26900"
     CDS             <1..576
                     /locus_tag="VHX39_26900"
                     /inference="COORDINATES: protein motif:HMM:NF012956.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="discoidin domain-containing protein"
                     /protein_id="HEX3994822.1"
                     /translation="SENNKVRTPADLMTLYLESVGRGASFLLNVPPDRRGLIYETDAA
                     ALRSFGKILTDTFGRNLARGARLRASDVRGKDPAYGPANLIDESRTTYWAANDGVTTP
                     TVTVDLARPATFNLVRLREYIPLGQRVDSFAVDIWRNGDWTPFGVGTSIGLARILHAE
                     TPVTASRLRLRVTGAAACPALSELGLFHYEG"
     gene            complement(564..2171)
                     /locus_tag="VHX39_26905"
     CDS             complement(564..2171)
                     /locus_tag="VHX39_26905"
                     /inference="COORDINATES: protein motif:HMM:TIGR04528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acido-empty-quinoprotein group A"
                     /protein_id="HEX3994823.1"
                     /translation="MSFKVSFPIRVSLPITIAAAACCLFGQGLDPTLLKQMPVKSWPT
                     YNGDYSGRRFSDLKQITAANVQDLSLAWAARFDASNAGPVTTIKSTPLLVNDVLYFTA
                     PNNVWAADVRTGRQIWHYQYPANTGSTIGNRGLGMYENWLFFETPDSHLVSLEADTGK
                     ERWKVEIADPKLDYTSTVAPIIVGDHVLVGIGGDHLDNPGFLQSRDPETGALQWKWFT
                     TPRKGQPGIETWPDEYAAAHGTGQTWMPGTYDPELNLYYVGTGNPNPVMAEKSRKGDN
                     LYTCSIVALNPDTGKMVWYYQVSPHDVHDWDAVETPVLFDGVINGQKRKLLAQASRNG
                     YFFVLDRKTGEHLLTKPFINTVNWAEKINAKGQPIPSPDKYPSVDGVLVSPAAGGGTN
                     WPSPSFDPNTGFLYVGSNQTYSMYYLTDTDARPEGWGGLDHVVSPDGGALLAIDYKTG
                     KICWRHDWPNGSGVASILTTAGDLLFTSNENYLVAFDAAKGKLLWHAGLTRTPSAGPI
                     SYMLDGKQYILVAAGDTLFSFRLNQPS"
     gene            complement(2171..>2789)
                     /locus_tag="VHX39_26910"
     CDS             complement(2171..>2789)
                     /locus_tag="VHX39_26910"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX3994824.1"
                     /translation="GAPDLVRSLVVLDDEKGILIAPVIREGRPDKGMPKLNLTEPQIA
                     DIVAWLHARTYTAGHRGTYIFGNVVTGNAKQGREYFEATCSGCHSATGDLAGIGAKHE
                     PLALQSLWLEPRGNGRRNPQPGPGAATVTVTLPSGKSVSGVLDHADDFTVSLHDADGH
                     FHSFSRDEAGLKVQIQDPEEAHAELLHKYTDADIHNVTAYLASLK"
BASE COUNT          513 a          934 c          774 g          568 t
ORIGIN      
        1 agcgagaaca acaaggtgcg cacccccgcc gatctgatga ccctgtacct tgagtcggtc
       61 gggcgcggcg caagcttcct tctgaacgtt ccgcccgatc gccgcggctt gatctacgaa
      121 accgatgcag cggccctgcg ttccttcgga aaaattctga ctgacacctt cggcagaaac
      181 ctcgctcgcg gcgcgcgcct tcgcgcatcc gatgtccgcg gcaaagatcc cgcttacggc
      241 cctgccaacc tcatcgacga gtcacgcacc acctattggg ccgccaacga cggcgtgacc
      301 acgccgaccg taaccgtcga tctggcccgt cccgccacct tcaacctggt ccgcctgcgc
      361 gagtacatcc ctctcggcca acgcgtcgat tcattcgcgg tggacatttg gcgcaacgga
      421 gattggaccc ccttcggcgt cggaaccagc atcgggcttg cccgaattct tcacgcggaa
      481 acgcccgtca cggcctcccg cctgcgcctg cgggtcaccg gagcggccgc ttgccccgcg
      541 ctatcggaac tcggcctctt ccattacgaa ggctgattca agcggaacga aaacagcgtg
      601 tctccggccg ccaccagaat gtactgcttg ccgtccagca tatagctgat cggccccgcg
      661 ctcggcgtcc tcgtcaggcc cgcatgccac agcagcttgc ccttggccgc atcgaacgcc
      721 accaggtagt tctcattgct ggtgaacagc agatccccgg ccgtcgtcag gatcgatgcc
      781 actccgctgc cgttcggcca atcatggcgc cagcagatct tccccgtctt gtagtcgatc
      841 gccagcagcg cgccgccgtc cggggacacc acgtgatcga gaccccccca gccctccggc
      901 ctcgcatccg tatcggtcaa ataatacatg ctgtaggtct ggttcgagcc gacgtagagg
      961 aagcccgtat tgggatcgaa gctcggcgat ggccaattgg tcccgccccc cgcggccgga
     1021 gacaccagaa caccgtcgac gctcggatac ttgtcggggc tcggaatcgg ctggcccttg
     1081 gcattgatct tttcagccca attcaccgtg ttgatgaacg gcttcgtgag aagatgttcg
     1141 cctgtcttgc gatccagcac gaagaagtag ccgttgcggc ttgcttgcgc cagcagtttg
     1201 cgcttttgcc cgttaatcac gccgtcgaat aacaccggcg tctccaccgc atcccagtca
     1261 tgtacatcat gtggcgaaac ctggtaatac cagaccatct tcccggtgtc cggattcaac
     1321 gccacaatcg agcaggtgta caggttatcg cccttgcggc tcttctccgc cattaccgga
     1381 ttcggattgc cggtcccgac ataataaagg ttcagttcgg gatcgtaagt gcccggcatc
     1441 cacgtctgtc ccgtgccatg cgcggccgcg tattcgtccg gccaggtctc aattccgggc
     1501 tggcctttgc gcggtgtggt gaaccatttc cattgcagcg ccccggtctc ggggtcgcgc
     1561 gactgcagga agcctggatt gtccaggtga tctccgccaa tccccaccag gacgtgatcg
     1621 cccacgatga tcggggcgac cgtcgaagtg tagtccagct tcgggtcggc aatctccacc
     1681 ttccatcgct ctttgccggt gtccgcctcc aggctgacca gatgactgtc cggcgtctcg
     1741 aagaacagcc agttctcata catccccagg ccgcgattgc cgatcgtgct gcccgtattc
     1801 gccggatatt ggtaatgcca gatctggcgg ccggtgcgta catcggctgc ccacacatta
     1861 ttgggggcgg tgaagtacag cacgtcattc accagcagcg gcgtcgattt aatggtcgtc
     1921 accggcccgg cattcgaagc gtcgaagcgt gccgcccagg ccagcgacag gtcctgcacg
     1981 ttcgccgcgg taatctgctt cagatcactg aagcgccggc ccgaatagtc gccgttataa
     2041 gtcggccagc tcttcaccgg catctgtttc agcagcgtcg ggtcgaggcc ctgaccaaac
     2101 aagcagcaag cggctgccgc gatcgttatg ggaagggaga cccggatggg aaaggaaact
     2161 ttgaatgaca ttatttcagg ctcgctaagt aagcagtgac gttatgaatg tcggcatcgg
     2221 tatatttgtg cagcagctcg gcatgggcct cttccgggtc ctgtatctgg accttcagcc
     2281 ccgcctcatc gcgcgagaac gaatggaaat ggccgtccgc atcatgcagc gaaactgtga
     2341 aatcatccgc gtggtccaga acgcccgaga ccgacttccc ggatggcagc gtcactgtaa
     2401 ccgtcgccgc gcccggtccc ggttggggat tccttcttcc attcccgcgc ggctctagcc
     2461 acagcgactg caacgccaac ggctcatgct ttgcgccgat cccggccaga tcgccagtcg
     2521 cggaatggca cccgctgcag gtcgcttcga agtactcccg cccttgtttc gcgttgccgg
     2581 tgacaacatt gccgaagata taagttccgc gatgcccggc cgtgtaagtc cgtgcatgca
     2641 gccacgccac gatgtctgca atctgcggtt cggtgaggtt cagcttcggc atccccttat
     2701 ccggtcggcc ctcccgaatc accggtgcga tcagaattcc tttttcgtca tccagcacca
     2761 ccagcgagcg caccaggtca ggcgcgcct
//
LOCUS       DATAVD010001409         2855 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2740501, whole genome shotgun sequence.
ACCESSION   DATAVD010001409 DATAVD010000000
VERSION     DATAVD010001409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2855
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2740501"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..1290)
                     /gene="chrA"
                     /locus_tag="VHX39_26915"
     CDS             complement(67..1290)
                     /gene="chrA"
                     /locus_tag="VHX39_26915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004896675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate efflux transporter"
                     /protein_id="HEX3994825.1"
                     /translation="MTMDDGDDAKQRTPAEVFRIFLRLGVTSFGGPVAHIGYFRQAFV
                     ERRRWLDEASFADLVALCQFLPGPASSQVVFSLGLMRGGWLGGLAASAGFTLPSALVM
                     LVFAYVAADLNGPLGVALLHGLKLVAVAIVAQAVWGMASSLCPDRTRAGIAVVGLALV
                     TAVGSAAGQISAIILGGCAGALLCQAAPAAVATGALPSMPVSRRLGLSFIAVFAVLLV
                     VPPLLLTGGMRSQSLALFEAFYRSGALVFGGGHVVLPLLRDAVVAPGWVSPDAFLAGY
                     GAAQSVPGPLFTFAAYLGAVMGPWPNGVVGAVVALVAIFLPGLLLVAGALPFWDAFRR
                     RPSAQAAMRGTNAAVVGILAAALYNPVWTSAVTGSRDFAIAAVGFVLLVVWRCPPLAV
                     VVAIVMATIMVYELA"
     gene            complement(1549..1677)
                     /locus_tag="VHX39_26920"
                     /pseudo
     CDS             complement(1549..1677)
                     /locus_tag="VHX39_26920"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
     gene            1657..2187
                     /locus_tag="VHX39_26925"
     CDS             1657..2187
                     /locus_tag="VHX39_26925"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3994826.1"
                     /translation="MRSNERHRYKRWQACWAPGKVSFAGRFVSFDDMYVSPKPTQPPP
                     VWIGGASDAALRRAARFAAVWQPTPLPIAQLIDGQATLREACAAIGRPPIPTRMSFRV
                     ELSTITGNAPPSGKERPTGWGTPDQVVEDLRRYRTAADLDSFHINFHGNRDLGQLLRS
                     MECFMADVAPAVCSMG"
     gene            2190..>2855
                     /locus_tag="VHX39_26930"
     CDS             2190..>2855
                     /locus_tag="VHX39_26930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX3994827.1"
                     /translation="MPREIVGKGLRFSLRHAPCAHICRYCLISESRKRSALPFSRFEH
                     LVHRFHDWQQAERRDLEIGVFVGPSFDYDIETLKGVARLRERRGAKFRILNLGGLRMR
                     RGEELVSWLEERQAAGIVGLHTSLAGDGDIHDRWNGRAGDFDYQLTMLRLGGERGMVR
                     QEKLFLTKNTMPVFDRLLDLLDTVPGELRSRSAGPFFYAGLATRYEDERLTENDRDQL
                     PERI"
BASE COUNT          582 a          966 c          870 g          437 t
ORIGIN      
        1 ttgaacccgg cgaaggcgat tgccgagatc aagaagctca ttgtggagcg ggcggtttag
       61 agcgtatcac gccaactcgt acaccatgat tgtcgccata acgatcgcca ccactaccgc
      121 caacggtgga caccgccaca ccaccagcaa tacaaaccca accgccgcaa tcgcaaaatc
      181 ccgagagccc gtcactgcac tcgtccacac cggattatac agcgccgctg ccaaaatccc
      241 gaccaccgcc gcattggtgc ctcgcatcgc tgcttgcgcc gacggccggc ggcggaacgc
      301 gtcccagaac ggcagcgccc ccgcgacgag cagtaacccc ggaagaaaaa tcgccaccaa
      361 agcgacgacc gctcccacga ccccgttcgg ccacggtccc atcaccgccc cgagatatgc
      421 ggcgaacgtg aacaatggtc ccggcaccga ctgggctgcg ccatagccgg ccaggaacgc
      481 atcggggctt acccaacccg gcgccaccac ggcatctcgc agcagcggca acacgacgtg
      541 gccgccgccg aacaccagcg cgccggaacg gtagaacgcc tcgaacagcg cgaggctttg
      601 actgcgcatc ccgccggtca gcaacagcgg cggcaccacc agcaagaccg caaataccgc
      661 gatgaacgac aagcccagcc ggcgcgagac cggcatcgaa ggcaacgctc cggtcgccac
      721 cgcagcgggc gccgcctgac acagcaacgc gccggcgcaa cctcccagga tgatggcgga
      781 gatttgtccc gccgcactac ccaccgcggt gaccaatgcg aggccgacaa ccgcgatccc
      841 ggcgcgcgtg cggtccggac acaacgagga cgccatcccc cataccgcct gcgccacgat
      901 cgctaccgcg accaatttca ggccatgcag gagcgccacg cccagtggac cgttcaggtc
      961 cgccgcgacg tatgcgaaca ccagcatgac gagggccgac ggcaacgtga acccagccga
     1021 ggcggcgagc ccccctaacc aaccgccgcg catcagcccc agtgaaaata ccacctggct
     1081 gctcgctggg cctggcagga actggcaaag cgccacgagg tcggcaaacg aggcttcatc
     1141 aagccagcgc cggcgttcga cgaacgcctg acggaaatag ccgatgtggg cgaccgggcc
     1201 gccaaacgat gtcacgccaa ggcgtaggaa gatccggaaa acctcggcgg gcgttctttg
     1261 cttggcatcg tcgccatcat ccatggtcac gcaccccagg ccggggggca gtgagcaact
     1321 gggacgcctc ggcctcccga agctgcgcga tgtcagccgc cggcgaacgc ggcccaattg
     1381 ttccggacag ctgccccata cgatgcgcga taacactcgc ccggtgcgcc gtcgagccgg
     1441 tagcgccgtc agcagacagc caggcgtgat cgcgctgtga gcgccaagct catggaatgg
     1501 cacaccgaga gcagcgaatt cggcctcgtt ccagccgacc ccgatcccgg caatgacccc
     1561 gggcataaga tcgagcgtcg ccagcgcctt cgcggtggcg atcgggttac ggtacggcat
     1621 gatcagcacc gaaacgccaa cgccgatccg cgtggtgtgc gcagcaatga acgacatcga
     1681 tacaaacggt ggcaggcatg ctgggctcca ggcaaagtgt cgtttgccgg ccgcttcgtt
     1741 tcgttcgacg atatgtatgt cagtcccaag ccgacccaac cgccgcctgt ctggatcggc
     1801 ggcgccagcg acgccgccct acgccgagca gcacgcttcg ccgcggtgtg gcaaccgacg
     1861 ccgctgccca tcgcgcaact gatcgatggg caggccaccc tacgcgaggc gtgcgctgcg
     1921 atcggccgtc caccgatacc gacccggatg agtttccgtg tcgaactcag cacgatcacc
     1981 ggtaatgcgc cgccttccgg caaggaacgg cccaccggtt gggggacgcc agaccaggtg
     2041 gtcgaggatt tgcgccggta ccggacagcg gcggacctgg acagcttcca catcaacttc
     2101 catggtaatc gtgacctcgg gcagttgctc aggtcgatgg agtgtttcat ggcggacgtc
     2161 gcgccggccg tttgcagcat ggggtaacaa tgccgaggga gatcgttggg aaagggctac
     2221 ggttttccct gcgtcatgcg ccatgtgcgc atatttgccg ctattgcctg atctcggaat
     2281 cgcgtaagcg cagcgctctg ccgttttccc gtttcgagca ccttgtgcac cggtttcacg
     2341 actggcagca agccgagcga cgtgatcttg aaattggcgt ctttgtcgga ccgtcctttg
     2401 attacgacat cgagaccctg aagggcgtcg cgcgcctgcg ggagcggcga ggtgcgaaat
     2461 tccgtatact caatctcggc ggtttgcgga tgcgtcgcgg tgaggagctg gtctcctggc
     2521 tcgaagagcg gcaggctgcc ggcatcgtcg gcctgcacac ctcgctcgcg ggggacggtg
     2581 acattcacga tcgctggaat ggcagggccg gcgatttcga ctatcagctc actatgctgc
     2641 ggcttggtgg cgagcgtggt atggtgcgcc aggagaaatt gtttctgaca aagaacacaa
     2701 tgccggtttt tgaccgcctg ctggatctgc tggacactgt tccgggagaa ctgcgcagcc
     2761 ggtccgccgg cccgttcttt tacgccggtc tcgcgacccg ctatgaggac gaacggctca
     2821 ccgagaatga ccgagaccaa ctgccggagc gaatt
//
LOCUS       DATAVD010001410        14724 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3294940, whole genome shotgun sequence.
ACCESSION   DATAVD010001410 DATAVD010000000
VERSION     DATAVD010001410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 14724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14724
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3294940"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..217
                     /locus_tag="VHX39_26935"
     CDS             <1..217
                     /locus_tag="VHX39_26935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994828.1"
                     /translation="DALGAQGLPFESAGEDAEDDDATTWNIDYMYDVGLMIGGGSNNI
                     QKNIIGERGLDLPREPKVAATTAVGRG"
     gene            217..1302
                     /locus_tag="VHX39_26940"
     CDS             217..1302
                     /locus_tag="VHX39_26940"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3994829.1"
                     /translation="MEFGLSLEQRQFDDSLRSFLADRLPMERLRALAEPGGGYDEGLW
                     HGLAELGLHGLVVPERFGGAGLGVLDAAVAAEGLGYAAAPVPFTGPTVMAPLAFVNSA
                     TEAQQDEYLPLVAAGEVRIAVGFAGLAGQTGAASLTLDGSRLTGTITGVMDAGAATHF
                     LAYLRDGTGALVAANASGVTQSLQRSLDRTRPLVNVSFDGTTAELLVAANDKLAAARR
                     VLDAGRVVLAADTLGAAQTMLDRAVAFAKERVQFGRVIGSFQGVKYMLADCVTMLEPC
                     RGMVWYAAHAQDGLPDEARLTACHAKAHVADIAREVARMTTETHGGMGFTDLLGLHYW
                     FKRISFNRQILGGPEHCREEAAALQGW"
     gene            1363..2706
                     /locus_tag="VHX39_26945"
     CDS             1363..2706
                     /locus_tag="VHX39_26945"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX3994830.1"
                     /translation="MTSLPIDQMIDTQRGLISREIFVSPEFHQQELERVFSRAWLFVG
                     HESQIPKLGDYFVSRMGEESVIMCRDAQSKVHVFLNSCRHRGMKVCRYEQGNTSLFVC
                     PYHSWSYTTDGKLQGVPLYRALYEGTLDRSEWSLIEVPKLQIYKSTVWASWDPEAPDL
                     MTYLGDSVDHLDQVLDCRDGRPGGSEVIGVHKWIFPSNWKFAAENFLGDTYHNPSHRS
                     VDMIGIGPSAQRGQRRDNEYAKGQHVWVGFPQGHGMHSVHMPEQFDYQPSYAQYPEVE
                     EYFRQAFYERQRRLGNKARLLPFTGNLFPNTSWHGRQPRALCVWHPHSTTETEAWRFF
                     LVDADAPAMVKDVLRRFYMRYSGPAGMTEQDDMENWLYATQSSKGTIARRYPFNYQMS
                     MGAYKVDDPIPGMVSTQITDQTPRNYYRVYARYMKGEAWDSLLGRDLAPLRAAAE"
     gene            2712..4031
                     /locus_tag="VHX39_26950"
     CDS             2712..4031
                     /locus_tag="VHX39_26950"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX3994831.1"
                     /translation="MIDLAGGTVDREIFTSPDVHRQELEKLFARTWLFVGHESQVAKP
                     GDFFVSRMGDESVILCRDDRGGVHVFLNSCRHRGMKVCRYEQGNTSLFVCPYHSWSYT
                     TDGKLQGVPQFRTLYAGTLNRDDWGLVEVARMENYKGSIWATWDPQAPDFLTWLGDAA
                     EHFDHVIDCRDGRPGGAEVIGVHKWIFPSNWKFAAENFLGDTYHNPSHRSVDMVGMSA
                     SAQAGQRRDNEYAKGQRVWVGYPQGHGVTSAYVPDDVDYSPTYQQYPEVDEYFRHCFH
                     ERKQRLGKRANLLPLVGTIFPNASYHGRQPRGICVWHPHSPTETEAWRFFLVDADAPA
                     AVKDVLRHYYMRYSGPAGMTEQDDMENWLYATAASKGTIAKRYPLNYQMSMKLPNASH
                     LGPGEVATQMTDQTPRNFYRAWQRYLNGDNWGSLLGRDIQPIQRAAE"
     gene            4028..4567
                     /locus_tag="VHX39_26955"
     CDS             4028..4567
                     /locus_tag="VHX39_26955"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: protein motif:HMM:NF007479.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019380 - 3-phenylpropionate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate/cinnamic acid dioxygenase
                     subunit beta"
                     /protein_id="HEX3994832.1"
                     /translation="MKRGVAYFALKQEIEDFLYQEADLLDARKFREWLDFLAEDLVYF
                     MPIRRNVKFGEHDERENTRQGEGISWFDEDKWTVTKRVEQILTGVHYAEEPLSRVTHM
                     VSNIRLVDVKPSVEDPQEVSVSCRFLVFQSRVEYENYTFIGRRNDVLRRNGDSWLIAR
                     RELILDQNVLLAKNLSILF"
     gene            4581..4766
                     /locus_tag="VHX39_26960"
     CDS             4581..4766
                     /locus_tag="VHX39_26960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994833.1"
                     /translation="MIELIAVKVGAKLSLIGDITAEVIEKIDDEWVKVRLVEVPEGKG
                     TAGDEELCHATDVKEVL"
     gene            complement(4777..5856)
                     /locus_tag="VHX39_26965"
     CDS             complement(4777..5856)
                     /locus_tag="VHX39_26965"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HEX3994834.1"
                     /translation="MSDISITRTAAPKTPPSDESLTFGNVFTDHMFLMNYDEGKGWHD
                     PRIVPYGPFTLDPATCVLHYGQGIFDGLKAFRGQDGHVRLFRLPDHARRLNRSAHYLC
                     IPELDPALVEESIRLLVEVDQHWVPKKPGTSLYIRPTVIATETFLGVHPSSSYLYYVI
                     IGPVGAYYKEGMNPVRILASDQHVRAVKGGLGAAKTMANYAASLYGAEEAHKAGYTQV
                     LWLDALEHKYLDEVGTMNIMVKIGDEVITPPLGGAILAGITRDSVLTLLREWGVRAAE
                     RQVSIDEVLDAAKAGRLEMWGTGTAAVISPVGELGYKGERYVIGDGKTGALTQKLYDT
                     IVGIQYGTEPDTHGWARLLGNRTGG"
     gene            complement(6032..7393)
                     /gene="tolB"
                     /locus_tag="VHX39_26970"
     CDS             complement(6032..7393)
                     /gene="tolB"
                     /locus_tag="VHX39_26970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system beta propeller repeat protein
                     TolB"
                     /protein_id="HEX3994835.1"
                     /translation="MLLLPSPQFRRRDLICGALGSAVLAAAPLPVLAQSTGGTGGSAV
                     IDVNGARNAPIPVAITDLGGGPLGPDISAIVTSDLARCGLFRPIDRAAFIQSGPSDSS
                     TPNFQNWRPTGAQALVTGQAFDDGANVRVEFRLWDILPGTQLQGTAFTAPKANWRRVA
                     HIMADAIYQRLLGEKGYFDTQIVYVSSQGPKAHAVRRLAIMDQDSANQRYLTDGTWMV
                     LTPRFNPVRGEIVYMSYANNQPRVYMMNVATGAQSSLGHFNTMTFSPRWSPDGGTVVM
                     ATTDGGASDIIAVTGGSVRRLTNSGAIDVTPCFSPDGARIAFASDRGGDQQIYIMSAN
                     GGSAQRISYGNGRYGTPVWSPRGDLIAFTRYAGDTSNFSIGVMRPDGSGERLLAEGWL
                     VEGPTFAPNGRVLMFWRETPGNAQGYGSSARLFSIDITGFNEQPAPTPTDATDPAWSP
                     LGV"
     gene            complement(7561..8580)
                     /locus_tag="VHX39_26975"
     CDS             complement(7561..8580)
                     /locus_tag="VHX39_26975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994836.1"
                     /translation="MLQRSPPVLTAPVRQFLSRNPRLRIGGIVSLLGHLLVILALMIT
                     IPSWTPDEQKEPDATIEMIFDGKAQTTIKAPAPAPIPAPSKEIAPPAPPVTEATKTEP
                     IEAPPPPPPPPPPPQPSHVSAPRPAPPSNLPPPEPSPVEAPIIPPPPAPPAKAREAPP
                     QLITPPIPPPREKPPPAPPSQTAQPNSTQNMAANSNALEATLLRLRQLQAQKEPPRAR
                     PNPKAGGQPDSGGNPASNDTDALSAAARGEIGAHVRECWTKDAGAEGVDKLSVVLHVV
                     TDATGTTRFANVADEDKGKMSDPVFQAFAERAVRAVMDVRCATLPLPHQMLGHTNNLT
                     FRFRP"
     gene            complement(8592..9104)
                     /gene="tolR"
                     /locus_tag="VHX39_26980"
     CDS             complement(8592..9104)
                     /gene="tolR"
                     /locus_tag="VHX39_26980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098567 - periplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolR"
                     /protein_id="HEX3994837.1"
                     /translation="MAFSLNQKGSVRGRYRPLAEINVTPMVDVMLVLLIIFMVTAPLM
                     TSGVSVDLPKTNAQPINNDSQPLTVSVRANGDVYLQDQQVPLPDVVDKLKAIAANNPD
                     RRIFVRGDKDLPYGRIMELMGIITQGGFTHVALLAEQTGPTAAAPSAPSSAPSSSPGA
                     APKSGRPGPG"
     gene            complement(9108..9830)
                     /gene="tolQ"
                     /locus_tag="VHX39_26985"
     CDS             complement(9108..9830)
                     /gene="tolQ"
                     /locus_tag="VHX39_26985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008853493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolQ"
                     /protein_id="HEX3994838.1"
                     /translation="MNSTVDAANLAAQGTDFSLWGLFLEANFVVKLVMLGLLLASVWV
                     WAVVFEKVVSLRKVNREATAFEDRFWSGGSLDELFDKEGDNPKHPMASVFSAAMNEWR
                     RSKRAAGADIAHSSARERIDRAITVTVTREMERMERWMVFLASVGATAPFIGLFGTVW
                     GIMHSFAAIAQMHNTNLAVVAPGIAEALFATAMGLVAAIPAVLAYNKISTDLSRFAAR
                     LEGFGSEFSAILSRQSEAGAGA"
     gene            complement(9952..10446)
                     /locus_tag="VHX39_26990"
     CDS             complement(9952..10446)
                     /locus_tag="VHX39_26990"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbgC/FadM family acyl-CoA thioesterase"
                     /protein_id="HEX3994839.1"
                     /translation="MTINLASISPDGRHRYAIRVYYEDTDAGGVVSHTTYLRYAERAR
                     TEALRELGVPHADLVQQFGLMFMVRRIEVDYERGARLDEALTVETEVLEVGGATTRLR
                     QTVRSKDGICAALTIRLACVRVEGDRPGRVPAPWRKGLIAMRDSRPAAELHESAGRSF
                     SRGG"
     gene            complement(10443..11549)
                     /gene="ruvB"
                     /locus_tag="VHX39_26995"
     CDS             complement(10443..11549)
                     /gene="ruvB"
                     /locus_tag="VHX39_26995"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010666766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEX3994840.1"
                     /translation="MKRPRVTPEPDAIDDRTVSPARREEDAPEASLRPQTLAEFTGQK
                     ASRENLALFIMAAKARGEALDHVLLHGPPGLGKTTLAQIIARELGVGFRATSGPVIQR
                     AGDLAAILTNLQPRDVLFIDEIHRLQPAIEEILYPAMEDFQLDLIIGEGPAARSVRID
                     LSPFTLVGATTRSGLLATPLRDRFGIPLRLIFYTPEELRRIVVRGASLLGLALTEDGA
                     TEIARRSRGTPRIAGRLLRRVRDIAAVSGQSPVNHAVADAALTRLEVDQRGLDEMDRR
                     YLRRMAEHHGGGPVGVETLAAALAEARDTLEDVVEPYLIQEGLILRTSRGRVLGPSGW
                     RHLGLMPPKTAAQGTLLDEPESDEIGIAENGLGE"
     gene            complement(11546..12163)
                     /gene="ruvA"
                     /locus_tag="VHX39_27000"
     CDS             complement(11546..12163)
                     /gene="ruvA"
                     /locus_tag="VHX39_27000"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEX3994841.1"
                     /translation="MIAQLTGLVDALEDGRCVVDVAGVGYLVHASSRTLAALPRPPEL
                     AKLLVETHVREDAIQLFGFAETSERDWFRLLTTVQGVGPRVALSILSALAPRDLIGAI
                     AGRDQASLTRAPGVGARLAARLLTELKDKVGGMPSSAGAAITIQPLQPRGTQADALSA
                     LVNLGYRRPDAQATVARVVERLGDTAGLDAIIRDSLKELASRTGV"
     gene            12302..13474
                     /locus_tag="VHX39_27005"
     CDS             12302..13474
                     /locus_tag="VHX39_27005"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3994842.1"
                     /translation="MPIARRTLMAGTALGLGAPYIARSARAAEKDLAIGVSIPLTGPG
                     AATGITTQRTLEHGVETINAQGLAIGGDVYKMKLSFYDNKYVPAEAVTIVEKMLADGT
                     RFLISLGSGNSVPVVAKTTAVKCLQMSYASGKGHLTAPEFPLSFRVAPTNETAWAVYP
                     WLRKTFPNVQKVGHMNPSDEAGFTESEDRRMIAEKNGFTNIANEFFKRGAADFYPVAT
                     RLAAANPDLIDFGGTIGRDQSLGCKALRELGYKGMIMLGYSDVRSFVEVAGPEAAEGT
                     ILFDTLVDPQNAAQKELQAWWLNKYGPPFPTFAYSVWDTPFILAEGIRRSKSVDPETI
                     ANTMHGMSWTGLYGPEAFGMKSVYGIDTTITRAIPMAQVKGGKPVQLAMVEWPVNV"
     gene            13479..14342
                     /locus_tag="VHX39_27010"
     CDS             13479..14342
                     /locus_tag="VHX39_27010"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3994843.1"
                     /translation="MNGTLIAQIVTSGLVTGLIYMLIALGVTLLFGIMRVVNFVHGEL
                     VMLSAFAVYFLGSGAGLPFFLALPAAILISAMLAVFCQYALFKPLQYEILNCFIVGIG
                     ASFAIRSASWAIFGPEPIAIPPTFPGVLKIGGVFIAKQRLFAAALCIALAVLLYGYLH
                     YTKPGKAMRAVEQDREAALLMGVSSEQVYLSAFVISAILAAVGGAMLGSLFGVDPEMG
                     AEPLLKSFIIVQIGGMGSIAGTVIAGLFIGLSDSITGTLLGGELAFIMDFAILMLILI
                     VRPRGLFGYDV"
BASE COUNT         2870 a         4492 c         4448 g         2914 t
ORIGIN      
        1 ggatgcactt ggcgcacaag gcctgccgtt cgagtcagcc ggcgaggatg ccgaagacga
       61 tgacgccaca acgtggaata tagactatat gtacgatgtt gggctaatga tcggtggcgg
      121 gtcaaacaat attcaaaaga acatcattgg cgaacgcggt ctcgatctgc cccgcgagcc
      181 gaaagttgcc gccacgactg cggttgggag aggctgatgg aattcggatt gagcctcgaa
      241 cagcgccagt tcgacgattc gctgaggtct tttttagcgg atcggctgcc aatggagcgg
      301 ttgcgtgctc tcgccgagcc gggtggcggt tacgacgagg gattgtggca tggtctggcg
      361 gaactcggcc tgcatggcct ggttgtgccg gaacgattcg gcggtgccgg actcggcgtg
      421 ctcgacgccg cggtggcggc cgagggtctt ggttatgccg cggcgccggt gccgttcacc
      481 ggtccgacag tcatggctcc actcgccttc gtgaacagtg cgacggaagc gcagcaggac
      541 gagtatttgc cgttggtcgc agcgggcgag gtccgcatcg cggttgggtt cgccggcctg
      601 gcggggcaaa ccggcgcggc ttcgctgaca ctggatgggt ccaggctgac cggaacaatc
      661 accggcgtca tggatgccgg cgcggccacg cattttctgg cgtacttgcg cgatgggacg
      721 ggcgcgctgg ttgcggcaaa tgcatctggt gtgacgcagt cgctgcaacg ttcgttggac
      781 cgcacccggc cactggtaaa tgtgtcgttc gacggcacga cagcagaact tctcgtggca
      841 gccaacgata aactagctgc ggcgcggcgc gtgttggacg cgggacgggt tgtgctcgcg
      901 gcggacacgc ttggtgcggc gcagacgatg ctcgatcgcg cggtggcgtt cgccaaggag
      961 cgggtccagt tcggccgcgt tatcggcagt ttccaggggg tgaaatatat gctcgccgat
     1021 tgcgtcacga tgctggagcc gtgcagaggt atggtttggt acgcggcgca cgcccaggat
     1081 gggttgccgg atgaggcgag actgacagcc tgccatgcga aagcacatgt cgccgacata
     1141 gcgcgcgagg tcgcgcggat gaccactgag acgcatggcg gcatggggtt caccgacttg
     1201 ctcgggctgc attactggtt caagcgcatc agcttcaatc ggcaaattct tggcggtccg
     1261 gaacactgcc gtgaggaggc cgctgcactc caggggtggt aacgcccctg gccttccctg
     1321 ctcctctgcg gcacaatcgc ctcaactacg gaggacctgt gcatgacgtc tctgccgatc
     1381 gatcaaatga tcgacacgca acgcgggctg atcagccgcg aaatcttcgt ctcgcccgag
     1441 tttcaccagc aagagcttga acgcgtgttc agtcgcgcct ggctgttcgt cggtcacgag
     1501 agccagatcc cgaagctagg cgactatttc gtgtcacgga tgggtgagga gtccgtgatc
     1561 atgtgccgcg acgcccaaag caaggttcat gtgtttctga attcctgccg gcaccgcggg
     1621 atgaaagttt gccgctacga acaaggcaac acatcattgt ttgtttgccc ataccatagt
     1681 tggagctaca cgacggacgg caaattgcag ggcgtgccac tgtaccgcgc actgtacgag
     1741 ggcactttgg accgttcgga atggtcgctg atcgaggtcc cgaaactgca gatttataaa
     1801 agcactgtct gggcatcctg ggacccggaa gctcccgacc tgatgacgta tcttggcgac
     1861 tcggtggacc atctcgatca ggtactggac tgccgggatg gcaggcctgg cggctccgag
     1921 gtcatcggcg tgcacaaatg gatcttcccc tccaactgga aattcgctgc cgagaatttt
     1981 ctaggcgata cctatcacaa tccgtcgcac cggtcggtgg acatgatcgg catcggtccc
     2041 tcggcgcaac gcggccaacg gcgcgacaac gaatatgcca agggacagca cgtctgggtt
     2101 ggcttcccgc agggacacgg catgcacagt gtgcatatgc cggagcaatt cgactaccag
     2161 ccgagctatg cgcaatatcc cgaggtcgaa gaatattttc gccaggcgtt ttatgagcgg
     2221 cagcgccgtc tcggcaacaa agcaagactt ctgccgttca ccgggaacct gtttcccaac
     2281 acctcctggc acggccgtca acctcgggcg ctgtgcgtct ggcatccgca cagcacgacc
     2341 gagaccgagg catggcgctt cttcctggtc gatgccgacg cgccggccat ggtgaaggac
     2401 gtgctacggc ggttctacat gcggtattcc gggccggctg gcatgaccga acaagacgac
     2461 atggaaaact ggctctacgc gacacagtcg agcaaaggca cgatcgcacg gcgctatcca
     2521 ttcaactatc agatgtcgat gggcgcgtac aaggtcgacg atccgatccc cggcatggtg
     2581 tcgacccaga tcaccgatca gacaccgcgc aattactacc gcgtctatgc ccgatacatg
     2641 aaaggggaag cctgggattc gttgcttggc cgcgacctgg cgccgttgcg cgccgcggcg
     2701 gagtgacaga catgatcgac ctcgccggcg gcaccgtgga ccgggagatc ttcacgtcgc
     2761 ccgatgttca ccgtcaggaa ctggagaagc tgttcgcccg cacctggctg ttcgttggcc
     2821 atgaaagcca ggtcgccaaa ccgggagact tcttcgtctc gcggatgggc gatgaatccg
     2881 tcatcctgtg ccgggacgac cgcggcggtg ttcacgtctt cttgaactcg tgccgccatc
     2941 gcgggatgaa ggtctgccgc tacgaacagg gcaacacgtc gctgttcgtc tgtccttatc
     3001 attcctggag ctacacgacc gacggcaagc tgcaaggcgt gccgcaattt cgcaccctgt
     3061 atgccggcac actgaaccgc gatgactggg gtctcgtcga agtcgcccgg atggagaact
     3121 acaaaggttc catatgggca acctgggacc cccaggcgcc cgatttcctc acctggctcg
     3181 gcgacgctgc cgagcatttc gaccacgtca tcgattgccg ggacggccgc ccaggtggcg
     3241 ccgaggtcat cggcgtgcac aaatggatct ttccgtccaa ctggaaattt gccgccgaga
     3301 attttctggg cgacacttac cacaaccctt cccatcgctc cgtcgacatg gttggcatga
     3361 gtgcatccgc ccaagctggg cagcgccgcg acaacgaata tgcgaaaggg cagcgcgttt
     3421 gggtcggcta tccgcaaggc cacggcgtga ccagcgcgta tgtgccggac gacgtggact
     3481 attcgccaac ctatcagcag tatcccgagg tcgacgagta ttttcgacat tgcttccatg
     3541 aacgcaaaca gcgtcttggc aagcgtgcca acctgttgcc tttggtaggc acgatatttc
     3601 cgaatgcatc gtaccacgga cggcagccgc gagggatctg cgtctggcat cctcacagcc
     3661 ccacggaaac cgaagcctgg cgcttctttc tggtcgacgc cgatgcaccc gccgccgtga
     3721 aagacgtcct gcgtcactat tacatgcgct attccggacc cgccggcatg accgagcagg
     3781 acgacatgga aaactggctc tatgcgaccg ccgccagcaa aggaaccatc gcaaagcgtt
     3841 atccgctgaa ctatcagatg tcgatgaagc tgccgaacgc aagccatctg ggacctggcg
     3901 aggttgcaac gcagatgacc gaccagacac cgcgtaattt ctatcgcgcg tggcaacgct
     3961 acttgaacgg cgacaactgg ggttctctgt taggccgtga catacaaccg atccagaggg
     4021 cggcggaatg aaacgcgggg tcgcatattt cgcgctgaag caggagatcg aagacttcct
     4081 gtatcaggaa gccgatttgc tggatgcccg aaaattccgc gaatggctcg attttctggc
     4141 tgaagatctg gtctacttca tgccgatccg ccgcaacgtg aaattcggtg agcacgacga
     4201 acgagaaaat acgcgtcagg gtgaaggcat ttcctggttc gacgaagaca agtggaccgt
     4261 gaccaagcgc gtcgagcaaa tcctgaccgg tgtgcactac gccgaggagc cgttgtctcg
     4321 cgtcacccac atggtcagca acatccgttt ggtcgatgtg aaaccatcgg tggaggatcc
     4381 gcaggaggtg tcggtcagtt gccgcttcct ggtgtttcag agccgcgtcg aatacgaaaa
     4441 ttacaccttt atcggccgac gtaacgacgt gctgcggcgg aatggcgact cttggctcat
     4501 cgcgcggcgc gaactgatcc tggatcagaa cgtgttgctg gcgaagaatc tcagcatcct
     4561 gttttgatgg aggtccgtaa atgatcgaac tgattgcggt caaggtcggc gcgaaactca
     4621 gcttgatcgg cgatattacc gctgaagtca ttgagaagat cgacgatgaa tgggtaaaag
     4681 tgcgcctggt cgaggtgccc gaaggcaaag gaacggccgg cgacgaggaa ctctgtcacg
     4741 ccacagacgt gaaggaggtt ctttgaggaa ccgtcctcac cccccggtgc gatttcccag
     4801 taatcgcgcc caaccgtgcg tatctggctc ggtcccgtat tgaatgccaa cgatcgtatc
     4861 atatagcttt tgcgtcagcg ccccggtctt gccatcgccg ataacgtagc gttcgccttt
     4921 atacccgagc tcccccacag gagagatcac cgctgccgtc ccggtgcccc acatttccag
     4981 tcgtccggct ttcgccgcgt ccagcacctc atcgatcgag acctgtcgct ccgccgcgcg
     5041 cacaccccac tcgcgaagca atgtcagcac ggaatcccgc gtgattcccg ccaggatcgc
     5101 gccgcccaga ggaggcgtga tgacctcatc gccgattttc accatgatgt tcatggtgcc
     5161 aacctcatcg agatacttgt gctcgagtgc gtcaagccaa agcacttgcg tatatccagc
     5221 cttgtgtgct tcctccgcgc cgtacaggct tgccgcgtag tttgccatcg ttttcgcggc
     5281 gccgagcccg cctttgaccg cgcggacatg ctgatcagag gctaagatcc gcaccgggtt
     5341 catgccctcc ttgtagtacg ccccaaccgg accaatgatc acgtaataca gatacgaact
     5401 cgacggatgc acgcccagaa acgtctcggt cgcgatgacc gtgggccgga tatacagtga
     5461 ggttcccggc ttcttgggaa cccagtgctg atccacttcc accagcagcc ggatcgattc
     5521 ctccaccagg gcgggatcga gttccgggat gcacagataa tgcgccgagc ggttcaaccg
     5581 ccgcgcatgg tccggcaaac gaaacagtcg cacgtggcca tcttgaccgc gaaacgcctt
     5641 caatccgtcg aagatgcctt gcccgtaatg caacacacag gttgccggat ccagcgtaaa
     5701 tggcccgtac ggcacgatcc tgggatcatg ccaacctttc ccctcgtcat agttcatcag
     5761 gaacatatgg tctgtgaaca cattcccaaa cgtaagggat tcatccgacg gcggcgtttt
     5821 gggagcggcg gtccgggtga tgctgatgtc tgacatggct tttctcggca gctttcctgg
     5881 gatttcatca cgggcagata ggtcagtatt gctgccatat cttgaagccg cagcgcaagc
     5941 cctcttttcc aagcattccg tactcgcggc aagatataac cgccggatta cgtccgaacc
     6001 cgcgccatgg tcataatgtt gcgcaaagcc cttacacccc aagcggcgac caggcggggt
     6061 cagtggcatc ggtcggcgtc ggggctggct gctcgttgaa cccggttatg tcgatcgaaa
     6121 acagtcgggc cgacgacccg tatccctgcg cattgccggg cgtctcacgc caaaacatca
     6181 gcacgcgtcc attgggcgcg aatgtcggtc cctcgaccag ccagccttcc gccagcagcc
     6241 gttcacccga cccatccgga cgcatcacgc caatcgagaa attcgatgta tcgccagcgt
     6301 aacgtgtgaa cgcaatcagg tctcctcgcg gcgaccacac cggtgtcccg taacggccgt
     6361 tgccgtagct gatacgttgc gcgctgccgc cgttcgcact catgatataa atctgctgat
     6421 caccaccgcg atccgaggca aacgcgattc gcgcgccatc cggactaaaa catggcgtga
     6481 cgtcaatcgc ccccgaattt gtcaaccgtc gcacggatcc gccggtgacc gcaataatgt
     6541 ccgaggcacc gccatcggtg gtagccatca ctaccgttcc tccatccggt gaccagcggg
     6601 gtgagaacgt catcgtatta aaatggccca gagatgactg cgcccccgtc gccacattca
     6661 tcatatagac tcgcggctga ttgttggcat agctcatata gacgatctca ccccgcactg
     6721 gattgaaccg gggcgtcagc accatccatg tcccgtcggt caaatatcgc tggttggcac
     6781 tgtcctgatc catgatcgcc aaccgtcgta cggcgtgtgc cttggggccc tgtgacgaga
     6841 cgtaaacgat ctgcgtatcg aaatagccct tttcacccag aagccgctga tagattgcat
     6901 cggccataat atgcgccacg cgccgccaat tggcttttgg cgcggtgaac gcggttccct
     6961 gtagttgcgt ccccggcagg atgtcccaca agcggaattc cacgcgcaca ttcgcaccgt
     7021 catcgaatgc ctggccggta accagtgcct gggcaccggt cggcctccaa ttttggaaat
     7081 ttggcgtgct gctgtccgag ggcccacttt ggataaacgc ggcgcgatca atcggccgga
     7141 acagaccgca acgcgccagg tcactcgtca cgatcgcgga aatgtcgggc ccaagaggac
     7201 cgccgcccag gtcggtgata gcgaccggaa tgggcgcgtt acgcgcgccg ttgacatcga
     7261 tcaccgctga cccgccggta ccgcctgtcg attgggcaag cacaggaagc ggcgcggcgg
     7321 ccaatacggc ggagcctaaa gcgccacaga tcaaatcgcg ccggcggaat tgtggagagg
     7381 gaagcagaag cattgttggt cacctcgggt ggaacaagat cttcacgtcg caacgttggt
     7441 tgcattggcc atgaccgcaa aatcgatcgc gggcggcatg gttcctatgg ttgagaggtc
     7501 agacggaaca ttccattcgc gatacgccta aatcagtccg tgcagagcca tgacaaacga
     7561 tcacgggcgg aaccggaacg tcaggttgtt ggtatggccg agcatctgat gcggcaacgg
     7621 caaggtggcg caacggacat ccatgacggc ccggactgca cgttcggcaa atgcctggaa
     7681 caccgggtcc gacattttgc ccttgtcctc gtcggccacg ttcgcgaaac gggtcgtccc
     7741 tgttgcatcg gtgacgacgt gtaaaacgac acttagttta tccacacctt cagcgccggc
     7801 gtccttggtc cagcactccc gcacatgagc cccaatctcg cctcgcgcag ccgcgctcag
     7861 ggcatcggtg tcgttgctcg cgggattacc gccactgtcg ggctggccgc ctgccttcgg
     7921 attcgggcgc gcgcgcggcg gttccttctg cgcttgcagt tgccgcaagc gtaacagggt
     7981 cgcttccaac gcgttgctgt tcgctgccat gttctgcgtc gaattgggct gggccgtctg
     8041 gctcggcggc gccggcggtg gtttctcgcg cggcggtggg atcggcggag tgatcagttg
     8101 aggtggcgcc tctcgcgcct tcgccggcgg ggcgggcggc ggcgggatga tcggcgcctc
     8161 gacgggactc ggctccggcg gtggcagatt ggacggcggc gcaggccgcg gagcactgac
     8221 atgcgagggc tgcggcggtg gaggtggggg cggtgggggc ggcggtgcct cgatcggttc
     8281 ggttttcgtc gcctcggtca ccggcggtgc gggcggcgca atttccttcg aaggcgcggg
     8341 gatcggagcc ggcgccggag ccttgatggt cgtttgtgct ttgccgtcga aaatcatttc
     8401 gatcgttgcg tccggttcct tttgctcatc aggcgtccaa ctcggaattg tgatcatcaa
     8461 agccagaata accagcaggt ggccaagcag agaaacgatc ccaccaatgc gcagccgcgg
     8521 attgcgcgac aggaactgcc gtaccggagc ggtcagaaca ggaggggacc gttgcaacat
     8581 cgcgccgaca atcagcccgg tccgggccgt ccggatttcg gggccgctcc aggggaggag
     8641 gacggggccg acgacggggc cgatggtgcc gccgcggtcg gcccggtttg ctcggcaagc
     8701 agcgcaacat gggtgaagcc gccctgcgta atgatcccca tcagttccat gatacggccg
     8761 tacggcaggt ccttatcgcc ccgcacgaag atgcgtcggt ccgggttgtt cgccgcaatc
     8821 gccttcagtt tgtcgaccac gtcgggcaac ggcacttgct ggtcctgtag gtagacgtcg
     8881 ccattcgctc gcaccgacac ggtcagcggc tggctgtcgt tattgatcgg ttgggcgttc
     8941 gtcttcggaa gatccaccga cacgccagag gtcatcaaag gcgcggtcac catgaagatg
     9001 atcagcaaca ccagcatgac gtcgaccatc ggcgtgacat tgatttccgc caacggccgg
     9061 tagcggccgc gaaccgagcc tttctgattg agcgagaacg ccaccgttca ggcccccgcc
     9121 ccggcttcgc tctgacgcga aaggatggcg ctgaactcgc tgccaaaacc ctccagacgg
     9181 gcggcgaagc gggacagatc ggtactgatc ttattatagg cgagcaccgc tggaatcgct
     9241 gcaacaaggc ccattgcggt ggcaaacaac gcctcggcga ttccgggtgc gacaaccgcc
     9301 aggttcgtgt tgtgcatctg cgcgatggcg gcgaagctat gcatgatccc ccagaccgtg
     9361 ccgaacaggc cgataaacgg tgcggtcgct ccaacagaag ccaaaaacac catccagcgt
     9421 tccattctct ccatctctcg cgtcactgtt acggtgatgg cccgatcgat cctttcccgc
     9481 gccgaggagt gggcgatatc ggcgccggca gcgcgcttcg agcgtcgcca ctcattcatt
     9541 gcggcggaga acaccgaggc catcggatgt tttgggttat cgccttcctt gtcgaacaac
     9601 tcgtccaggc tgccccccga ccagaaccgg tcctcgaacg ccgtcgcctc gcggttgacc
     9661 ttgcgcaggc tgaccacttt ctcgaacacg accgcccaaa cccagacgct ggccaacagc
     9721 aggcccagca tcacaagctt gacgacaaag ttggcctcca ggaacaggcc ccagagcgag
     9781 aagtcagtcc cttgcgcagc caggttggcc gcgtccactg tcgaattcac gtcctctgtc
     9841 cccttcgatt tcctatgcca ggcaagactg gcgcttcctc gctatcgtca tcgcctgggt
     9901 catggccaga cccgaccggt gggggccctt tgatactgcg tgcctcacac cttagccacc
     9961 gcgactgaaa ctcctgcccg ccgactcgtg cagctctgct gccgggcggc tgtctcgcat
    10021 ggcgattaat ccttttcgcc atggcgctgg aacccgacca ggcctatctc cctccacccg
    10081 cacgcaggcg agccggatgg tcagcgccgc acagatgccg tccttgctcc gcacggtttg
    10141 ccgcaatctg gttgtggcac cgccaacctc gagcacctcg gtctcgactg tcagcgcctc
    10201 atccaggcgc gctccgcgct catagtccac ttcgatgcga cgcaccatga acattagccc
    10261 aaactgttgg acgaggtctg cgtgaggcac gccaagctcg cgtagcgctt cggtgcgggc
    10321 gcgttcggca taccgtaggt aggtggtgtg agaaacgact ccaccagcat cggtgtcttc
    10381 gtagtaaacg cgtatggcat aacgatggcg gccatctggc gagatggaag caaggttaat
    10441 cgtcattcac ccaaaccatt ctccgcgatt ccgatctcat ccgactcggg ctcatcgagc
    10501 aacgttccct gtgccgcggt ctttggtggc atcaagccca gatgccgcca acccgacgga
    10561 ccaagcaccc ggccccggct ggtgcggagg atcagcccct cctggataag gtacggttcg
    10621 accacatcct ccagcgtatc gcgcgcttcc gccaatgccg cagccagggt ctcgacccca
    10681 accggtccgc caccatggtg ttcggccatt cgtcgcaggt agcgccgatc catttcatcc
    10741 aacccgcgct gatcgacctc gagtcgcgta agggccgcat cggcgacggc gtggttgacc
    10801 ggggactggc cggacacggc ggcgatgtcg cgcacccgac gtaacaatcg cccggcaata
    10861 cggggagtac cgcgggaccg tcgcgcaatt tcagtcgctc cgtcctcggt cagcgccagg
    10921 ccaagcaggc tggcaccacg gacaacaata cggcgtaatt cctcgggggt gtagaatatc
    10981 agccgcagcg gaatgccgaa gcgatcgcgc aacggcgtcg ccagcaggcc ggagcgggtt
    11041 gttgccccga ccaaagtgaa cggcgacagg tcgattcgca cactacgggc cgcgggcccc
    11101 tcgccaatga tcaggtcgag ctggaaatcc tccatcgccg gataaaggat ctcttcgatt
    11161 gccggttgca ggcggtggat ttcatcgatg aacagcacgt cccgcggctg caggttggtg
    11221 aggatcgctg ccagatcgcc ggcccgctgg atcaccgggc ccgaggtggc ccgaaaaccg
    11281 acccctaatt cgcgagcgat gatctgcgcc agcgtggttt tacccaaacc tggagggcca
    11341 tgaagcaaca catgatccag cgcctcgccg cgggctttgg ccgccatgat gaacagggcc
    11401 aggttttctc gcgaagcctt ctgcccggtg aattcagcca gcgtctgcgg ccgcaacgac
    11461 gcttcgggcg cgtcctcctc ccggcgcgca ggagacaccg tgcggtcatc aattgcgtca
    11521 ggctccggcg tcacgcgagg ccgtttcata cccctgtcct gcttgcgagt tctttcagcg
    11581 agtcacgtat gatggcgtcc agacccgccg tgtcaccaag ccgctccacc acgcgcgcga
    11641 ccgtcgcctg ggcgtcgggc cggcgatacc cgagattgac caacgccgac agtgcgtccg
    11701 cttgtgtgcc tctgggctgg agcggttgta tcgtgatggc agcgccagcc gacgaaggca
    11761 tcccgccgac cttgtctttc agttcggtca gcaatcgggc ggcaagcctt gcgccaacac
    11821 ctggcgcgcg ggtcaggctg gcctggtctc gtcccgcgat ggcgccgatc aggtcacgcg
    11881 gagccagcgc cgacaggatg gacaaagcaa ctcgtggccc cacgccctgc acagtcgtca
    11941 gcagccggaa ccaatctcgc tcggacgtct cggcaaagcc aaacaactgg atcgcgtcct
    12001 cccggacatg agtttccacg agcagtttgg ccagttcggg cggccgcggc agggccgcaa
    12061 gcgtgcggga ggaagcgtgc acgagatacc ctacgcccgc cacgtcgacc acgcagcgcc
    12121 cgtcctccaa agcgtcaacc aggccggtca actgggctat cattgcgatt tgaccatggg
    12181 tgcgaatcgg ctcaatcgtg gaatgcggtg attatacacc gcacgcatgt gagcgtgctg
    12241 cccgattgac aagcggcaac gcgccacgga cggtccgtgg caaaacctga ggaaacgtat
    12301 catgccaatc gcacgccgca cgttgatggc cggaaccgct ttgggtctcg gtgcgccgta
    12361 tatcgcgcgc tccgcccggg cggccgagaa ggacctcgcc atcggggtca gcattccgtt
    12421 gaccggccca ggggctgcga cgggcataac gacacaacga acactggaac acggcgttga
    12481 gacgatcaac gctcagggac tggcgatcgg tggtgacgtg tacaagatga aattgtcgtt
    12541 ttacgacaac aaatatgttc ctgctgaggc cgtcacgatt gtcgagaaga tgctcgccga
    12601 cggcacacgg tttctgatct cgttgggctc cggtaattcc gtcccggtgg ttgccaagac
    12661 caccgcggtg aaatgcctgc aaatgtccta cgcatccggc aagggtcacc tcaccgcacc
    12721 cgaattcccc ttgagtttcc gtgtcgcccc caccaacgag accgcatggg cagtctatcc
    12781 ctggttgcgc aaaaccttcc cgaacgtgca aaaggtcggc catatgaacc cgtcggatga
    12841 ggcggggttt accgagtccg aagatcgccg gatgatcgcc gagaaaaacg gctttaccaa
    12901 tatcgccaac gaattcttca agcgaggcgc ggcagatttc tatccggtgg cgacccgact
    12961 cgctgccgct aatccggatc tgatcgactt cggcggcacc atcggccgtg accaatcgct
    13021 tggctgtaag gcgctgcgag agcttgggta taagggcatg atcatgctcg gttactctga
    13081 cgtcagatcg tttgtcgagg tcgcggggcc ggaagccgcc gagggcacca tcctgttcga
    13141 caccctggtc gatccacaaa acgcggcgca gaaggaactg caggcatggt ggctgaataa
    13201 gtacggcccc ccgttcccga catttgcata ttcggtctgg gacacgccgt tcattcttgc
    13261 cgaggggatt cgccggtcga aatctgtgga tcccgaaacg atcgccaaca cgatgcatgg
    13321 catgtcatgg accgggcttt atggccccga ggcattcggc atgaaatcgg tctacgggat
    13381 cgatacgacc atcacccggg cgattccgat ggcccaggtg aaaggtggga aaccggtgca
    13441 gctcgcgatg gtcgagtggc cagtgaacgt ttgatcgcgt gaacggaaca ctgatcgcgc
    13501 agatcgtcac cagcgggctg gtgaccgggc tcatctacat gctcatcgca ctgggcgtga
    13561 cgttgctgtt cggcatcatg cgcgtggtga atttcgtgca cggcgaactt gtcatgctgt
    13621 cggcattcgc ggtgtatttt cttggctcgg gcgctggatt gccgttcttt ctggcattgc
    13681 ctgcggcgat tctgatcagt gcgatgttgg cggtgttttg ccaatatgcg ctgttcaagc
    13741 cgctgcaata tgagatcctg aactgcttca tcgtcggcat tggcgcatcg ttcgcgatcc
    13801 gttcagcgtc atgggcaatc tttggtcctg aaccaattgc gattccaccg acgttcccgg
    13861 gagtgttgaa aatcggcggc gtgttcatcg ccaaacagcg tttgtttgct gccgcgctgt
    13921 gtatagcgct tgctgtgctg ctttacggat atctgcacta caccaaaccc ggcaaggcga
    13981 tgcgcgccgt cgaacaggac cgcgaggcgg cgctgctgat gggcgtgagc agcgagcagg
    14041 tttacctcag tgcgttcgtg atcagcgcaa ttttggcggc agtcggtggc gcgatgcttg
    14101 gatcgctgtt cggcgtcgat cctgaaatgg gcgcggaacc gcttttgaaa tcgttcatca
    14161 tcgtgcagat cggcggcatg ggcagcatcg ccggaacggt gatcgcggga ctgttcatcg
    14221 gattgtcgga cagtattaca gggactcttt tgggcggcga attggcgttt atcatggatt
    14281 tcgcgatcct gatgctgatc ctgatcgtcc ggccgcgtgg actgttcggt tacgatgtct
    14341 gatctgcgat gacacggccg gcttctctcg atcatcgtga ccctgaccga ctgagccatc
    14401 ttcacgatgg tgatggcgag cccggccgta ttgctcaacc tgcgacccgt ccggcctaca
    14461 cgcgttggtc caggatcgcc actgccgtcc tgattgttgc gctgctgctc ctgccggttg
    14521 tcgtgcataa cacctacata ttgcatgtga tgatcgtgat cgcgatcaac gtcatcatgg
    14581 cggtgtcgat gtggctgctg ggtatcaccg gcctgatctc cttcggtcag gccgggttca
    14641 tgttcatcgg cgcgatgacc accgcgctgc tgaccaagaa cgcaggttgg tcattctggg
    14701 tggcaatgcc cttatctgca atca
//
LOCUS       DATAVD010001411         2884 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2557062, whole genome shotgun sequence.
ACCESSION   DATAVD010001411 DATAVD010000000
VERSION     DATAVD010001411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2884
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2557062"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..987
                     /locus_tag="VHX39_27015"
     CDS             <1..987
                     /locus_tag="VHX39_27015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994844.1"
                     /translation="PPTAGLYARVRKSLQIPECVVADAVGIEPVCTSKFPTTGKLSGN
                     FSEKRAQRPNNEQLPPVLQRLTGKFPMLWKRELRRHIWEYATELAGAGNSVSQRLGIE
                     LVCGRGRGADRGTRGFAGSVWQRNIMPYTPQWERLDDAVTWIMKSGLTEQKAQRDLCR
                     AMAEGAVAVRLIIPADRIGPSQALSGGDYPAPATLSPEHIDWHESRPLRWDQPAQRPG
                     EPVSLYWQRAGALCDRTIQLVEVMTSDVRKVFAESAESPEVELPPDLTTPTPAEGAKT
                     RATKEAIKALWPDGIPDTCLIKARDDKIIEWCRENGRPPPTRRTIQRTLKDQ"
     gene            1240..2694
                     /locus_tag="VHX39_27020"
     CDS             1240..2694
                     /locus_tag="VHX39_27020"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HEX3994845.1"
                     /translation="MCCSPTQGPQVVYRAPGSLRINPRNPRVHSKKQIRQIANSIRAT
                     GFIGAVIVDENDFVLAGVGRLHAAEMLELPLVPTLTVAGLKEAQKRAFSIADNKLTEN
                     AGWDRDLLVQELTELAPLLEPLNWDLTLTGFEATEIDALFMDLGDERPDPADTVPAID
                     KFVVTRTGDLWLMRNHRVLCADARSQSDLDRLMGAGRAKMGFLDVPYNVRIADVQGRG
                     RIKHPEFAHASGEMSSSEYVRFLEQSLTNAARVSADGSVHFVCNDWRHIADLITAAGT
                     VYGTMLNLCVWAKTPPGQGSFYRSAHELIGVFRVGNEVHQNNIQLGTRGRNRSNVWSY
                     PGVVGFGGERSKLLAMHPTTKPVALIADAMRDCTTKNDIVLDTFVGSGSTIMAAEKVG
                     RHGYGLDCEPRYIDVTIRRWQAFTKAEAILDGDGSTFAEIEAERRPIPTDGNQSKSHV
                     VDGHDQEAQANDYGGDWVSLCDIVAMPVTKADQS"
     gene            2691..>2884
                     /locus_tag="VHX39_27025"
     CDS             2691..>2884
                     /locus_tag="VHX39_27025"
                     /inference="COORDINATES: protein motif:HMM:NF039194.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5681 domain-containing protein"
                     /protein_id="HEX3994846.1"
                     /translation="MTISKEGGVNYEVGYGRPPVATRFGPGNVANPKGRPRRAKSVGQ
                     IIQKVMMTRVRIEVNGRSRTV"
BASE COUNT          628 a          851 c          864 g          541 t
ORIGIN      
        1 ccgccaaccg cgggccttta tgccagagtc aggaaatctc tgcagatacc ggaatgcgtg
       61 gtggcggatg cagtcgggat cgaacccgtc tgcacatcta aattcccgac aaccgggaaa
      121 ttatccggga atttttcgga aaaacgggct cagcgcccga acaatgagca gctaccgccc
      181 gtgttacaga gacttacggg caaattcccg atgctctgga aacgggaatt gcgccgccat
      241 atctgggaat atgcaaccga gttggctggc gctgggaatt cagtaagtca gcggttaggg
      301 attgaattgg tctgtgggag aggccgcggt gccgatagag ggacgcgagg gtttgccggc
      361 tcagtatggc aaaggaacat tatgccttac actccgcaat gggaacggct ggacgacgcc
      421 gtaacctgga tcatgaagtc tgggctgact gaacagaagg cccagcgcga cctgtgccgc
      481 gcgatggctg agggcgcagt tgccgtgcga cttatcatac ctgcggacag gattgggccc
      541 tctcaggccc tatcaggcgg agactacccg gcgcctgcca ctttgtcgcc ggaacatatc
      601 gactggcatg aatcacgacc actccgatgg gaccaaccgg cacagcgccc cggcgagccg
      661 gtcagcctat attggcagcg tgccggcgcc ctatgcgata ggaccattca actcgtcgag
      721 gttatgacca gtgacgttcg gaaggtcttt gccgaatcag cagaaagccc tgaagtcgag
      781 cttccacctg atttgaccac gccaacgcct gcggaaggcg cgaagacgcg cgctaccaaa
      841 gaggccataa aggcgctttg gccagacggt attcccgaca cctgtttgat caaggcgcgc
      901 gacgacaaaa tcattgagtg gtgccgtgaa aacggccgcc cgcctccgac ccggcgcaca
      961 attcagcgga ccttaaaaga ccaataatac tgattttcga cggccactcc gtgagctgcg
     1021 ctcggatgga tccgcggggc ttttctgcct acgacacttg acgacatgtc gccacttgtc
     1081 gccgacatgg caccagttgt cgctccactt agggtcgaag tctggctaag tgggccctcg
     1141 gttccacgga aaccgcgcct cgtgcgacgg cttccggtgt gaaccgagga ggcctcaatg
     1201 agtgaactac cacccagcag ccgagggttc gccgagacca tgtgctgctc gccgacgcag
     1261 ggaccgcagg tcgtttaccg tgcgcccggg tcgctgagga tcaatccgcg gaatccgcgc
     1321 gttcactcga aaaagcagat ccgccagatt gccaacagca tacgggctac gggcttcatc
     1381 ggcgccgtta tcgtcgacga gaacgatttc gtgctggccg gcgtggggag actccacgcc
     1441 gccgaaatgc tggagctgcc gctggtgccg acattgacag tggcgggcct gaaggaggcc
     1501 caaaaacgcg ctttttccat cgccgataac aaacttacgg agaacgcggg ctgggatcgc
     1561 gacctgcttg tgcaggaact caccgaactt gctccgctgc tggaaccgct caactgggat
     1621 ctgacgctga ccggcttcga ggctaccgag atcgacgccc tgttcatgga tcttggcgat
     1681 gagcgccccg atccggccga taccgtgccg gcaatcgaca aatttgtcgt cacccgtacc
     1741 ggcgaccttt ggcttatgcg taaccatcgg gtgctatgcg ccgacgcccg gtcgcaatcc
     1801 gacctcgacc gcctgatggg ggctggccgc gccaaaatgg gattcctcga cgtcccgtat
     1861 aacgtccgga tcgccgacgt gcagggccgt ggtcgcatca aacatccgga atttgcccat
     1921 gcgtccgggg agatgagctc ttccgaatat gtacgattcc tcgaacagtc actgaccaat
     1981 gcggcgcggg tctcagccga tggcagcgtg cactttgtct gcaatgactg gcgtcatatc
     2041 gcggacctca tcaccgcagc cgggacagtg tacggcacga tgctgaacct gtgcgtttgg
     2101 gccaagacgc cgcctggcca aggctcattc tatcgatctg cccacgaatt gatcggtgtg
     2161 ttccgggtcg gtaacgaagt gcatcaaaat aatatccaac tcggcacacg gggtcgcaac
     2221 cgcagcaacg tttggagcta tccgggggtc gtcggctttg gcggtgaacg cagcaaactc
     2281 ctggccatgc acccgacgac gaagccggtt gcgctcattg ccgatgcgat gcgcgattgc
     2341 actacaaaga acgatatcgt cctcgacacc ttcgtcggtt ctggcagcac catcatggcg
     2401 gccgagaagg tcggcaggca tggctatggc ctcgactgcg agccgcgcta catcgacgtc
     2461 acgatccggc gttggcaggc attcaccaag gccgaagcta ttctcgatgg ggacggtagc
     2521 acctttgcgg aaatcgaggc cgaacggcgg ccaatcccga ccgatggcaa ccagtcaaaa
     2581 agccacgtcg tggacggcca tgatcaagag gcccaagcca acgattatgg cggcgattgg
     2641 gtatccttgt gcgacatcgt tgcaatgccc gtcacgaagg ctgaccaatc atgactattt
     2701 cgaaagaggg cggagtcaat tacgaagtcg gttatggccg cccgccggtc gcaacccgtt
     2761 tcggacccgg aaatgtcgcc aacccaaagg gtcgcccgcg gcgggcaaag tccgttggcc
     2821 agatcattca gaaagtcatg atgacgcgag ttcgaatcga ggtgaatggc agatcgagga
     2881 ccgt
//
LOCUS       DATAVD010001412         6518 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2926966, whole genome shotgun sequence.
ACCESSION   DATAVD010001412 DATAVD010000000
VERSION     DATAVD010001412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6518
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2926966"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1704)
                     /locus_tag="VHX39_27030"
     CDS             complement(<1..1704)
                     /locus_tag="VHX39_27030"
                     /inference="COORDINATES: protein motif:HMM:NF023282.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MtrB/PioB family outer membrane beta-barrel
                     protein"
                     /protein_id="HEX3994847.1"
                     /translation="MITRNALRCVALATTCLAPLAAFADDPPASPPAVAPTPELFPNF
                     PATHGDIQLDLGGVMGNNANQAGRYNGLNSTGPFGGIGEIDLNMRAPWNSGDIRFFEL
                     NGNNLLFETSRHLGTGIGADDAWSNSVTNGVANNGSLEFKGGDQGIWQAGITYDTITY
                     TGNVIDSLYNVTGNTAALNNGLAPWGGATSTKAGTTSFTIPQLSRTGAMLPFQTGVRR
                     DLIGGNFKFHWDDWTFTGAMSHEHKEGSLENSFDGPWGGTAFGMPVNYDTDRYDMSAA
                     YTTHHLQALLQYTFSHFVDNVAFVNLPYPTSNTAAPFQRSAAYSTPPSNDAHYLTFMV
                     GTDVVPLTHINVNGRVGLEVQNDTFAPNTADPSPSGAGLSSLNSFGQGTSTTSPGIMA
                     DIYQLRLSAASRPLKNVDTRVYYGLDGRSVSLNQNAVYSGGGGGSTTDAAAAAAIGGT
                     QFFVVPQDWVKQNAGVEVGYRVIPEYDTKVTMGYRLDSVDRSNAQVGRSWTNTGSIGL
                     MSAFGSQINGKLSFDYVDRSGSLSYITPWLNLTGSPSPTYSGAYYQAPMTSEAVTLRA
                     DY"
     gene            complement(1732..2706)
                     /locus_tag="VHX39_27035"
     CDS             complement(1732..2706)
                     /locus_tag="VHX39_27035"
                     /inference="COORDINATES: protein motif:HMM:TIGR03508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DmsE family decaheme c-type cytochrome"
                     /protein_id="HEX3994848.1"
                     /translation="MKQTLALTLLFAMTLALGPLPASAQLQKAVAQTTAAPQASVSQA
                     EVRTCLTCHGADPKVTAILQSPMAVVGDRRTPFAQGGCESCHGDSAAHAAGKAPFPAI
                     VFRGPNASPVAVRNEVCAGCHEGGLHINWQGSAHEVNKVACTDCHDAHTAKDPMLVRT
                     AQVEVCFTCHARERADSFKYSHHPIREGKVVCSDCHNPHGSPGDTKLLKEFTVNQTCY
                     NCHADKRGPLLWEHQPVRDNCMNCHTPHGSTQPRLVKEQMNFLCSSCHSASAANHSGG
                     AFGGRSAIPFRGPGNFATNSALANQRACINCHSQVHGSNSPAGTYFFR"
     gene            3149..3403
                     /locus_tag="VHX39_27040"
     CDS             3149..3403
                     /locus_tag="VHX39_27040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994849.1"
                     /translation="MTQTGQQPPLIRIVPAGSSSGPPADAKAQAATGGPGGHRTKARI
                     AKDIGLFFAAPFVTLAYVSLFPFIAMAMLVQAWRHRKQAA"
     gene            3472..4728
                     /locus_tag="VHX39_27045"
     CDS             3472..4728
                     /locus_tag="VHX39_27045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994850.1"
                     /translation="MTVLLTLTSLSFADAPSAGDQQCLACHAMEGLAKQLANGGKLSL
                     HISGDGFGQSVHAVIGCAGCHTDINLAKHPPANNPIASQRVFSVAMVQVCRTCHSDKF
                     EQWSNSVHAALVRDGNPDAPICSSCHSPHAVMKGAAASLSTVPCKTCHSSIFTAYSAS
                     VHGVIREHGMLAAPLCFDCHGAHDVAVPSAGAGRRDVCLGCHTEALATHSSWLPNAQL
                     HFDVVSCPVCHTPRAQRTVNLILYNSATQKEISPNAGIPEFENLSGSASVPRAGLDPT
                     TLMTLLGALNRQGVEGKTSIRGRLEVRTGIEDHELTFATNAIGTCDTCHRQGAAAFQS
                     VEVSVAGPAGIPIHYDASKDVLSSVLSIDSVSGFYAIGGSRIGFLDLLFVLALVGAIG
                     WSAVHFAARWGFRHFGKPPPHRSGKG"
     gene            4734..5375
                     /locus_tag="VHX39_27050"
     CDS             4734..5375
                     /locus_tag="VHX39_27050"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEX3994851.1"
                     /translation="MQRIYLHPLPVRIWHWINAATCVSLFLTGVQIRYVGLVDVISFR
                     AAVALHGWLGFVLIANFFLWLGYYLCSDRIRAYHAELNPVKYFLGSLRQTLYYGYGIF
                     KGAPNPFHPSVLRKFNPLQAMTNQILMLLLLPVQGVTGVLLWDLVRFSRPVSLLGGVR
                     VIDTVHVLIFIFFSFYIPAHAYLGTLGRTSGQHYKEMFTGYEEADEEPADAAE"
     gene            5439..5744
                     /locus_tag="VHX39_27055"
     CDS             5439..5744
                     /locus_tag="VHX39_27055"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX3994852.1"
                     /translation="MNRLLLIALFSGTVGFAGTAQAAGDAVAGKAASPSCAMCHGASG
                     EGTKMGPKVAGMSEAAFIQAMNDYKSGKRDSPMMKSQTTQLTAADIANLAAYYATLK"
     gene            5797..6186
                     /locus_tag="VHX39_27060"
     CDS             5797..6186
                     /locus_tag="VHX39_27060"
                     /inference="COORDINATES: protein motif:HMM:NF019262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome domain-containing protein"
                     /protein_id="HEX3994853.1"
                     /translation="MRKRCVIAALALASAIAAGLSPSAVAADATVSFKDNVLPIFKAH
                     CISCHTPGSEGTATSGLDLTTWQGVMKGTKYGAMVVPGNADYSNLMWLLDWRASPQLR
                     MPHGQQQLPVAERDMIRNWIRQGAKDN"
     gene            complement(6208..>6518)
                     /locus_tag="VHX39_27065"
     CDS             complement(6208..>6518)
                     /locus_tag="VHX39_27065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994854.1"
                     /translation="RRHLGAETSVWGAQSGLHLAWFPPPELGSPDDLAASARRLGLDA
                     AAVRDEAVLLGFGATDEHHIETALRRLAASLPATREELPPVTAIPVGFSGTTAHGAQI
                     "
BASE COUNT         1191 a         1970 c         2025 g         1332 t
ORIGIN      
        1 ataatcggcc ctgagcgtga cagcttccga cgtcatggga gcctggtaat aagctccgga
       61 ataggtcgga ctgggcgagc ccgtcaggtt cagccaaggc gtaatatagc tgagcgaacc
      121 gctacgatcg acataatcga acgagagttt gccgttgatc tgcgacccga acgcagacat
      181 cagcccgatc gatccggtgt tggtccagct tcgcccaacc tgggcattgc tgcgatcgac
      241 cgagtccaga cggtaaccca tcgtcacctt ggtgtcgtac tccgggatca cgcgatagcc
      301 aacctcgaca cccgcattct gcttcaccca atcctgcgga acgacaaaaa actgggtgcc
      361 gccaattgct gcggcggcgg cagcatcagt cgtcgaaccg ccgccgccgc cggaatagac
      421 cgcgttctgg ttcagcgaga cgctgcgtcc gtcgagacca taataaaccc gtgtgtcgac
      481 gttcttcagc ggccgcgacg ctgcgctgag cctaagctgg taaatatccg ccatgatgcc
      541 cggcgaggtc gtactggtgc cctggccaaa agagttgagt gaactgagcc cagcgccgga
      601 tggggaggga tcggcggtgt tcggtgcgaa ggtgtcattc tgcacttcca acccaacccg
      661 cccgttcacg ttgatgtggg tcagcggcac gacatccgtt cccaccatga acgtcaggta
      721 gtgcgcgtcg ttgctgggcg gcgttgaata tgccgccgat cgttggaacg gcgcagcggt
      781 atttgaggtc ggatacggca gattgacgaa ggcgacgtta tcaacgaaat gggaaaaagt
      841 gtattgcagc agtgcctgca agtgatgtgt cgtgtatgcg gccgacatat cataacgatc
      901 ggtgtcgtag ttgaccggca tgccgaacgc cgtgccgccc cagggcccgt caaacgaatt
      961 ctccagcgaa ccttccttgt gctcgtggct catcgcaccg gtgaaggtcc agtcgtccca
     1021 gtgaaattta aaattgccgc caatgagatc gcgccgcaca ccggtttgga acggcagcat
     1081 ggcacccgtt cgacttagct gcggaatggt gaacgaggta gttcctgcct tggtgctggt
     1141 cgccccaccc cagggtgcca ggccattatt cagggctgcc gtgttgccgg tgacgttgta
     1201 gagcgaatcg ataacgttgc cggtataggt gatggtgtca taagtgatcc cggcctgcca
     1261 aatgccctga tcgccgccct taaactccag tgaaccgttg ttcgccacgc cattggtgac
     1321 agagttgctc caggcgtcgt cggcgccaat gccggtgccg agatggcggc tggtctcgaa
     1381 caaaagattg ttgccattca actcaaaaaa ccggatgtcg ccggagttcc agggcgcgcg
     1441 catgttcagg tcgatctcgc cgatgccgcc gaacggaccg gtcgagttca gtccgttgta
     1501 gcggcctgcc tggttggcat tgttgcccat gaccccaccc agatcgagct ggatgtcccc
     1561 atgcgtggcc gggaaattgg gaaacaactc gggcgtcggg gccacggcgg gcgggctcgc
     1621 gggcgggtca tcggcgaatg cggccagtgg cgccaggcag gttgtggcca gtgcaacgca
     1681 cctgagcgca ttccgagtga tcatctcaac ctccttggcc gtaccgttgc atcaccggaa
     1741 gaaataggtg cccgcggggc tgttcgaccc gtgcacctgc gagtggcagt tgatgcaggc
     1801 tctctggttc gccagcgctg aattggtggc gaagttgccc gggccccgga acgggatcgc
     1861 gctgcgtccg ccgaacgccc cgccgctgtg attggcggcc gatgcgctgt ggcaggacga
     1921 gcagaggaaa ttcatctgct ccttcaccag gcgcggttgg gtcgagccgt gcggcgtatg
     1981 acagttcatg cagttgtcac gcaccggctg atgttcccac agcaacggtc cgcgcttgtc
     2041 ggcatggcaa ttgtagcaag tctggttgac ggtgaattcc ttcagcaact tcgtatcgcc
     2101 cggagaaccg tgcgggttgt gacagtcgct gcacaccacc tttccctcgc gaatggggtg
     2161 atgcgagtac ttgaatgaat cagcgcgctc tctggcgtga caggtgaaac agacctcgac
     2221 ctgagccgtt ctcaccagca tcgggtcctt cgccgtatgg gcgtcgtggc agtcggtgca
     2281 ggccactttg ttgacctcgt gtgcgctgcc ctgccagttg atatgcaggc cgccctcatg
     2341 gcatccggcg cacacttcgt tacgcactgc gaccggtgag gcgttcggcc ctctgaatac
     2401 gatggccggg aacggggcct tgcctgccgc atgggccgcg ctgtcgccgt gacagctttc
     2461 acagccgcct tgcgcgaacg gagtacggcg atcgcccacg acagccatcg ggctttgcaa
     2521 aatggcggtg accttggggt cggcgccatg gcatgtcaga caggtacgca cttcggcctg
     2581 ggagactgag gcctgcggcg ccgcggtcgt ttgcgccaca gccttttgca attgtgccga
     2641 cgccggaagt ggcccgagcg ccagggtcat cgcgaacagc agcgtcagcg caagtgtctg
     2701 cttcatgtcg gtgcccctgg tgcttgcctt gctgggttca ctgtctgcac ggccacaaaa
     2761 tcctgcgccg ccgttggcgt gcaggagcgt tcggtccagc cgcacaatcg ggcactaaat
     2821 ggacaatcgg tagcaccagg gttaccggaa ttttataata ccagcggcgc tcggcgggat
     2881 ttgcggtgtg gttttatgca gcgccggcct gggttctttg gactgcggag tgggcccggc
     2941 ggcgttcacc gcaaatattt atgcatggtt aatggaacac attcgcaccg ttcacgccac
     3001 ggttcctgca ctggtagtac aaaattgggc aatgctggcg ctacaaagcg cagctccctg
     3061 cgagcactgt tttcgtcgca tggacccgac ccggcgtacc cgccggtgcc ggcctgtggg
     3121 tcaccggcgt tggccgggat agggagccat gacgcaaacc ggccagcaac cgccgctcat
     3181 ccgcatcgtc ccggcaggat catcctccgg gccaccggcc gacgccaagg cccaggcagc
     3241 gacgggcggg cctggcgggc accggaccaa agctcggatc gcgaaggata tcggcttgtt
     3301 cttcgccgcc ccgttcgtga cgctggcgta cgtttcgcta ttcccgttca ttgcgatggc
     3361 gatgttggtg caggcctggc gtcatcgcaa gcaggccgct tgatcgtcgt ggatcttgcc
     3421 tgctcgaaac ggcctacgtg gcgccttgca tgcacgctcg ccgcgattgc aatgaccgtc
     3481 ctgctgacgc tgacgtcgct ctcattcgcc gatgcgccgt ccgcaggtga ccagcaatgt
     3541 ctggcctgcc acgcgatgga ggggctcgca aagcaactgg ccaacggcgg aaagctatcg
     3601 ctgcatatat caggcgacgg cttcgggcag tcggttcatg cggtgatcgg ctgtgccggt
     3661 tgccataccg acattaacct cgccaaacat ccgccagcta acaacccgat tgccagccag
     3721 cgggtatttt ccgttgccat ggtgcaggtc tgccgcacct gccacagcga caagttcgag
     3781 caatggtcga acagtgtcca cgcggcattg gttcgtgacg gcaatccgga tgcgccgatt
     3841 tgcagcagct gtcactcgcc tcacgcggtg atgaaaggcg cggccgcttc gctgtctacg
     3901 gtgccttgca agacctgtca cagttcaatc ttcaccgcat attccgccag tgtgcatggc
     3961 gtcatacgcg agcacggcat gctcgcagcg ccgctttgct tcgactgtca cggcgcgcat
     4021 gacgtggcgg ttccctcggc gggcgcgggc cgccgggatg tttgtctggg ctgtcatacc
     4081 gaggccctgg ctacgcacag cagctggctg ccaaatgcac aattgcattt cgatgtggta
     4141 tcatgtccgg tttgccacac gccgcgggcg caacggaccg tcaacctgat cctgtataac
     4201 agcgcgacgc aaaaagagat ttctcccaat gcgggtatcc cggagttcga gaatttatcg
     4261 ggttcggctt ccgtgccgcg cgccggactg gatcccacca cgctgatgac gttgctcggt
     4321 gcgctgaacc gtcagggtgt cgagggcaag accagcatcc gcggccggct ggaagtgcgc
     4381 accgggattg aagaccacga gctgacattt gcaaccaatg cgatcggtac gtgcgatacc
     4441 tgccatcggc agggcgcggc agcattccag agcgtcgagg tttccgttgc cgggcccgcg
     4501 ggcattccga tccactacga cgccagcaaa gatgtgttga gttcggtgct ctccattgat
     4561 tcggtcagcg gtttctatgc catcggcggc agccgcatcg ggtttctgga cctgctgttc
     4621 gtgctcgctc tggtcggtgc catcggctgg tcggcggtgc atttcgccgc ccggtggggc
     4681 ttccgtcact tcggcaaacc gccgcctcat cggtcaggga aaggctaagc gagatgcagc
     4741 ggatttacct tcacccactg cccgtgcgga tctggcattg gatcaacgca gccacctgcg
     4801 tgtcgctgtt cctgaccggc gtgcagattc gctatgtcgg gctggtcgac gtgatcagct
     4861 ttcgggcagc cgtcgcgctg catggctggc ttggcttcgt gctgattgcc aatttctttt
     4921 tgtggcttgg ctattatctt tgttccgacc ggatccgcgc ctaccacgcc gagttgaacc
     4981 cggtgaaata ttttctcggc agtctgcgcc agacgcttta ttacggttat gggatattca
     5041 aaggtgcgcc caatccattt catccgagcg tattgcgaaa attcaatccg ctgcaggcga
     5101 tgaccaatca aattctgatg ctcctgctgc ttcccgtgca gggcgtcacg ggcgttctgc
     5161 tgtgggacct cgtgcgcttt tcgaggccgg tcagcttgct tggtggggtc cgggtcatcg
     5221 acacggtgca tgtcctcatc ttcatctttt tttcgttcta cattccggct catgcttatc
     5281 tcggcacgct cggccgcact tcgggacagc actacaagga aatgttcacc ggttatgagg
     5341 aggcggatga ggagcctgcc gatgcggcag agtaacgtca cccaccgtcc gcgtgcccag
     5401 tacgtcagca aaccatttgt cgagaaggga atcgcacgat gaaccgtctg cttctgatcg
     5461 ccttgttttc ggggactgtc gggttcgccg gcaccgcaca agctgccggt gacgccgtgg
     5521 cgggcaaggc tgcgtcgccg agttgcgcca tgtgccacgg ggccagtggc gagggcacca
     5581 agatgggtcc caaagtggcc ggtatgagcg aagccgcctt catccaggca atgaacgact
     5641 acaaatccgg caagcgcgac agtccgatga tgaagagtca gacgacccag ctcaccgccg
     5701 ccgatatcgc aaatctggcg gcatattatg cgacgttgaa atgagcgccg cctgcccatc
     5761 gctccaggcg agttatttgt tcggaaggat accgtcttga gaaaacgttg cgttatcgct
     5821 gccctggcat tggcatctgc aattgctgcc ggcctgagcc cgtcggccgt cgccgccgat
     5881 gcgaccgtga gtttcaagga caacgtgctg ccgatcttta aggcgcactg catatcgtgc
     5941 catacgccgg gcagcgaagg cacggcgacc agcgggctcg acctgacgac ctggcagggt
     6001 gtcatgaaag gcaccaaata tggtgccatg gtggttccag ggaacgcgga ttacagcaac
     6061 ctgatgtggc tgctggattg gcgtgccagc ccgcagcttc gtatgccgca cggccagcag
     6121 cagctaccgg tcgccgagcg ggacatgatc cgcaactgga tccggcaggg tgccaaagac
     6181 aattgacccc gatatccctc ggccgcgtca gatctgcgcg ccgtgtgcag tggtgccgga
     6241 aaatccgacc ggtatcgcgg taaccggcgg gagttcttcg cgtgttgccg gcagggaagc
     6301 tgccagccgg cggagtgcgg tctcgatgtg gtgttcatcg gttgcaccaa agcccagaag
     6361 caccgcctcg tcgcgcaccg cagccgcgtc caggcccaga cgccgcgccg acgccgccag
     6421 atcatcgggc gagccaagct cgggcggcgg gaaccacgcc agatgcagcc cggattgggc
     6481 gccccacacg cttgtctccg cgccaaggtg ccgccgca
//
LOCUS       DATAVD010001413         3790 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3295348, whole genome shotgun sequence.
ACCESSION   DATAVD010001413 DATAVD010000000
VERSION     DATAVD010001413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3790
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3295348"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..877)
                     /locus_tag="VHX39_27070"
     CDS             complement(23..877)
                     /locus_tag="VHX39_27070"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3994855.1"
                     /translation="MVQIRRMGPQIGVEVSGVDVRTLDDAGFAPIYQAWLNHNVLVVT
                     GQQLTIPEFLRYSRRFGHVTPHPSKSTRHPEHPDITLLGVNKFKPDGQLNQSIYRRGA
                     EGWHTDGAYDAVPFKATQLYALAIPDTGGDTLFASGYAAYDALSARLKTRLDGVNGAF
                     SYGGRRKAQALLNPEDRDVPPAIHPIIRTHSETGRKSLYFDPGKILSIQGADPAESAD
                     LIAELESHMIQPDGQYRHKWQVGDIVIWDNRCSYHKAAGDYPPEQDRIHWRVSIQEFS
                     QAGRLAAE"
     gene            971..1687
                     /locus_tag="VHX39_27075"
     CDS             971..1687
                     /locus_tag="VHX39_27075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016657 - obsolete oxidoreductase
                     activity, acting on NAD(P)H, nitrogenous group as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HEX3994856.1"
                     /translation="MHSDPALPDPALVDRAITSRRSVRAFLPTAVPRAVIAEIMDAAA
                     RAPSGTNMQPWQGHVLIGAARDALCAAVQTAFDAAEHGHRQEVQYYPDAFFEPYLSRR
                     RKVGWALYGTLGIGRGDAAKMQAQHRRNFQFFDAPVGMVFTIHRDLATGSWLDYGMFL
                     ENVMVAARARGLDTCAQAAWARYHNVIRPVLGLAPEQVVVCGMALGFADPDAPENGLV
                     TERESSSAFMSWHGFEAEHT"
     gene            1912..>3790
                     /locus_tag="VHX39_27080"
     CDS             1912..>3790
                     /locus_tag="VHX39_27080"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010514024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEX3994857.1"
                     /translation="MRNATEADVLDAVQMPGRHQVRVDRSRDSLLTDFGRATLSDRYL
                     MPGEEFQDLFARVASYYGDDQGHAQRIYDYMSRLWFMPATPVLSNGGTQRGLPISCFL
                     NEASDSLEGIVGLWNENVWLASKGGGIGSYWGNLRSIGEKVGAVGKTSGVIPFIRVMD
                     SLTLAISQGSLRRGSAAVYLPVSHPEIEEFVELRRPTGGDPNRKALNLHHGIQIPDAF
                     MRAVEADEKWALRSPKDKSIVREISARSLWIRILTARIETGEPYLIFSDHVARAQPEH
                     HKLAGLEVKTSNLCSEITLPTGRDHHGMERTAVCCLSSLNLEKWFEWENHPTFIEDVM
                     RFLDNVLQDFIDRAPPGMEKARYSAMRERSVGLGVMGFHSFLQALNVPWESVVAKVWN
                     KRIFRHIRAQADTASMILAEERGACPDAEEYGSKERFSHKMSLAPTASISIIAGNASP
                     GIEPIAANVFLQKTLSGSFTVRNRHLQKLLEQKGQDNEAVWSSITTTKGSVQHLDFLT
                     DDEKAVYKTAFELDQRWIIEHAADRAPFICQSQSVNVFLPANVNKRDLHQIHFMAWKR
                     GVKSLYYCRSLSIQRADNVSVKAVAPVDDIHPPANDAPANDATGQRPLVASSTNYEEC
                     LA"
BASE COUNT          732 a         1113 c         1196 g          749 t
ORIGIN      
        1 ccccgcgctg ccgcgaaaat cgctattctg cggcgagccg gccggcctgg gagaattcct
       61 ggatcgacac ccgccaatgg atccgatcct gttccggcgg gtaatcgccg gcagccttgt
      121 gataggaaca gcggttgtcc cagatcacga tgtcgccaac ctgccattta tgccgatatt
      181 gcccgtcggg ctgaatcata tggctctcga gttcggcgat caggtcagcg ctttcggcag
      241 ggtccgcgcc ttggatcgac aggatcttgc cgggatcgaa gtacagcgat ttgcgaccgg
      301 tctcactgtg cgtgcggatg atcgggtgga tggccggcgg cacatcgcgg tcttccggat
      361 tgagcaaggc ttgcgctttc cttcgcccac cgtaactgaa cgcaccgttg accccgtcca
      421 accgggtttt caaccgcgcc gacaacgcgt cgtacgcggc atagccgctg gcgaacaacg
      481 tgtcgccgcc ggtgtccggg atcgccagcg cgtaaagctg cgtggccttg aacggaaccg
      541 cgtcataggc gccatcggtg tgccagccct cggcgccgcg gcgatagatc gactggttca
      601 gctgaccgtc cggcttgaac ttgttgacgc ccaacagcgt gatgtccgga tgctccggat
      661 gccgcgtgct tttcgacgga tgcggcgtga cgtgaccgaa gcgtcggctg tagcggagga
      721 attcggggat cgtcagctgc tggccggtca ccaccagaac gttgtgattg agccaggcct
      781 gatagatcgg ggcaaagccg gcatcgtcga gtgtccggac atcgacgcca ctgacctcaa
      841 caccaatctg cggccccatc cggcggatct gaaccatgta tgtgtcctcc tgatgcggaa
      901 tcaggccacc attcctccgg tagcgtcaag tctgtcgcgt cggtagtctg cccggaacgg
      961 agcaaccttg atgcactcag atcctgcttt gccagatcct gccttggtcg atcgcgcgat
     1021 cacctcgcgc cggtcggttc gcgctttcct gcccactgcg gtaccgcgcg cggtcatcgc
     1081 cgaaattatg gacgctgccg cgcgcgcgcc aagtggtacg aacatgcagc cgtggcaggg
     1141 tcatgtgctg atcggcgctg cacgggacgc actctgtgcc gcggtgcaaa cggcgttcga
     1201 cgccgctgag cacggccatc ggcaggaggt gcagtattat cctgatgcat tcttcgaacc
     1261 gtatttgtct cgccggcgta aggttgggtg ggcgctgtac ggaacgcttg gtatcggtcg
     1321 cggcgacgcg gcgaaaatgc aagcgcagca caggcggaat ttccagttct tcgatgcgcc
     1381 ggtgggcatg gtgtttacca ttcatcgcga tctcgcaacg gggtcgtggc tcgattacgg
     1441 gatgttcctg gaaaacgtca tggtcgcggc gcgcgctcgc ggacttgata cctgcgcgca
     1501 agccgcctgg gcgcggtatc ataacgtgat ccggccagtg ctcggtctcg cccccgaaca
     1561 ggtcgtcgta tgcggcatgg cactgggctt tgccgaccct gacgcgccag agaacgggtt
     1621 ggtgaccgag cgagagagtt cgtccgcgtt catgagctgg cacgggttcg aggcagaaca
     1681 tacatagaac ttccagaggt tgtggaacct ggggagaaca cacgggaaac gcgtggccca
     1741 ggtgccacag cggcaagcca atcgtagatg tggtagccca gtgagcggaa acagccagat
     1801 ttggtgttgg caggaatcct cggggcgaaa ataatcgttt acagaggtcg ccgtcgacgc
     1861 cacatcagga gtgacgcaat tgcgtcacaa gcggcggagg acgagtcgat catgagaaac
     1921 gccacggagg ccgatgtgct tgacgcagtc cagatgccgg gtcgccacca ggtccgggtc
     1981 gatcgctccc gcgactcgct gctgacggat ttcggccggg cgacactgag cgatcgctac
     2041 ctgatgccgg gtgaggaatt ccaggatctg ttcgcccggg tggcatcgta ttacggcgac
     2101 gatcagggcc atgcccaacg catctatgac tacatgagcc ggctgtggtt catgccggcc
     2161 accccggtgc tgtccaatgg cggtacgcag cgcggcttgc caatctcatg ctttttgaac
     2221 gaagcctccg acagcctgga aggcatcgtt ggcctgtgga atgaaaacgt ttggctggcg
     2281 tcgaaaggcg gcggtattgg ctcttactgg ggcaatctgc gctcgattgg tgagaaggtt
     2341 ggcgcggttg gtaaaacctc gggcgtcatt ccgttcattc gggtgatgga cagtttgacg
     2401 ttggcgattt cccagggttc gctgcggcgt ggctcggcgg cggtttatct gccggtctcg
     2461 cacccggaaa tcgaggaatt cgtcgagctg cggcggccaa ccgggggcga tccgaatcgc
     2521 aaggcgctaa acctgcatca cggcattcaa attcccgatg cgttcatgcg cgccgttgag
     2581 gcagacgaga aatgggcgtt gcgctcgccc aaggacaaat ccatcgtgcg cgagatctcg
     2641 gcacggtcgt tgtggatccg tatcctgacc gcgcggatcg agaccggcga gccgtatctg
     2701 attttttcag atcatgtcgc gcgcgcccaa ccggagcatc acaagctggc gggtctggag
     2761 gtcaaaacct caaacctgtg cagcgaaatc accctgccaa ccgggcgtga ccatcacggc
     2821 atggagcgca ccgcagtctg ctgcctgtcg tccctgaacc tggagaaatg gttcgagtgg
     2881 gaaaaccacc cgacctttat cgaggacgtg atgcggttcc tggacaacgt cctacaggat
     2941 ttcatcgatc gagcgccgcc tggcatggag aaggcgcgct attcggcgat gcgcgagcgt
     3001 tcggtcgggc tcggggtcat gggtttccat tcgttcctgc aggcgttgaa cgtgccgtgg
     3061 gaaagcgtcg tggcgaaagt ctggaacaag cgcattttcc gtcacatccg ggcgcaggcc
     3121 gacacggcgt cgatgatcct ggccgaggaa cgcggcgcct gtcccgacgc cgaggaatac
     3181 ggcagcaaag aacgtttctc acacaaaatg tcgctggcgc cgaccgcatc gatctccatc
     3241 attgccggca acgcctcgcc tggcattgag ccgatcgcag ccaatgtgtt cctgcagaaa
     3301 acgttgtccg gcagtttcac ggtgcgcaac cggcatctgc aaaagctgct ggagcagaag
     3361 ggccaggata acgaagcggt gtggtcgtcg atcacgacaa cgaagggcag cgtgcaacac
     3421 ctggattttc tgaccgacga tgagaaggcg gtttacaaaa ccgcattcga actcgaccag
     3481 cgctggatca tcgagcacgc cgccgaccgc gctccgttca tttgccagag ccagtccgtc
     3541 aacgtcttcc tccccgccaa tgtgaacaag cgggatctgc atcagatcca tttcatggcg
     3601 tggaagcgcg gtgtgaagtc gctgtactat tgccgcagcc tgtcgattca gcgcgccgat
     3661 aatgtcagtg tgaaagcggt cgctccggtc gacgatatcc atccgccggc gaatgatgcg
     3721 ccggcgaatg atgcaaccgg gcaacgtccg ctggtcgcat catccaccaa ttacgaagaa
     3781 tgcctcgcct
//
LOCUS       DATAVD010001414         3274 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1063145, whole genome shotgun sequence.
ACCESSION   DATAVD010001414 DATAVD010000000
VERSION     DATAVD010001414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3274
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1063145"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..539
                     /gene="coaE"
                     /locus_tag="VHX39_27085"
     CDS             <1..539
                     /gene="coaE"
                     /locus_tag="VHX39_27085"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013211.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEX3994858.1"
                     /translation="AAAFTRAHIPVFDADAAVHKVQSKGGRAVRPIEAAFPGTIKDGA
                     VDRNALRAAVIGKPEAIRQLERILHPMVWEEEARFLATARRARKRAAVLDIPLFFETG
                     RERKVHKIVVVSAPQPVQIYRVRRRRRMSESDIRAIIARQMPDVEKRKRADIVVRTGL
                     SRSLTNRTMRRLILELLQ"
     gene            536..1210
                     /gene="dnaQ"
                     /locus_tag="VHX39_27090"
     CDS             536..1210
                     /gene="dnaQ"
                     /locus_tag="VHX39_27090"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003618429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HEX3994859.1"
                     /translation="MTRAVLFDTETTGLDPTTGDRVLEVAALELINDLPTGEYFHALI
                     DPERDIPEEVTRIHGFRSADVSGKPKFAEIAADLVAFFADAKLIAHNAPFDFGFLNAE
                     FQRLALPFLHPGRMIDTLALAKTRFPGMPNSLDALCRRFAIDLSQRTTHNALLDCRLL
                     AEVYVELTGGRQRGLGLAAQTSTAPVAVYVHTGPRSGRRLVPDEAALAAHAAMLSRLK
                     DPVWLA"
     gene            1327..>3274
                     /gene="secA"
                     /locus_tag="VHX39_27095"
     CDS             1327..>3274
                     /gene="secA"
                     /locus_tag="VHX39_27095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_043509192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEX3994860.1"
                     /translation="MFASLARAVFPNSNDRALKSYQRRVPKIGALEPAMEALSDEALA
                     AKTVEFRDRLAQGTRLDDLLPEAFAVVREASRRTLGQRHFDVQMVGGMVLHEGKIAEM
                     KTGEGKTLVATLPVYLNALTGKGVHVVTVNDYLARRDAEWMGQIYKFLGMTVGVIVHD
                     LDEVQRREAYNSDITYGTNNEFGFDYLRDNMRYRLEEMVQRDFNFAIVDEVDSILIDE
                     ARTPLIISGPSDESSDLYRQVDAVMKILSADPDTYEKDEKQRTVALTEPGAERLEDML
                     REAGVLTEGNLYDIFNVSVVHHAQQSLRAHTLYSRDVDYIVRNGEVILIDEFTGRMMI
                     GRRFSEGLHQALEAKEHVTVQPENQTLASITFQNYFRLYPKLAGMTGTAMTEADEFAE
                     IYKLEVIEIPTNVTVIRNDEHDEVYRTAEEKYEAVAKLIDEARSRKQPVLVGTTSIEK
                     SEIISELLKKKRVPHAVLNARYHEQESEIVAQAGAPGVVTIATNMAGRGTDIKLGGNL
                     EMRLRNELDGVTDEATREAITEKARAEIAAAHDVVKQAGGLLVVGTERHESRRVDNQL
                     RGRSGRQGDPGQSRFFLSLEDDLMRIFGSDRMGGMLQKLGLQQGEAIVHPWINKALEK
                     AQKKVEARNFDIRKNLLKFDNVMND"
BASE COUNT          672 a         1018 c         1023 g          561 t
ORIGIN      
        1 ccgctgcagc gttcacccgc gctcacatcc cggtgttcga cgccgatgcc gcggtccaca
       61 aggtgcagtc caaaggcggc cgtgcggtgc gtccgatcga ggcagccttc cctggcacga
      121 tcaaagacgg cgccgtcgac cgcaacgcat tgcgggcggc cgtgatcggc aaaccggagg
      181 cgatacggca gctcgaacgc atcctgcatc cgatggtgtg ggaagaagag gcccgcttcc
      241 ttgccaccgc ccgtcgtgcc cgcaagcgcg cggccgtgct tgatatcccc ctgttcttcg
      301 agaccggccg cgagcggaag gtgcacaaga tcgtggtcgt ctcggcaccc cagcccgtgc
      361 agatctaccg ggtacggcgg cgccgcagaa tgagcgaatc cgatatacgg gctatcattg
      421 cccgccagat gcccgatgtg gaaaagcgca agcgggccga tatcgtggtt cgcaccggcc
      481 tgtcgcggtc gctgaccaac cggacaatgc gccgcctgat cctggagttg ctgcaatgac
      541 ccgggccgtc ctgttcgaca ccgagaccac cggccttgac cccaccacag gggatcgggt
      601 gctcgaggtc gccgcgttgg aactgataaa cgacctgccc accggagagt atttccacgc
      661 cctgatcgat cccgagcggg acatcccgga agaggttacg aggatccacg gatttcgctc
      721 tgccgacgtg tcgggcaagc cgaaattcgc cgagatcgca gcagaccttg tggcgttctt
      781 cgccgatgcc aaattgatcg cacacaacgc gccattcgat ttcggcttcc tgaacgccga
      841 gttccaacgc ctggcgctgc catttcttca cccgggccgg atgatcgaca cgttggcgtt
      901 ggcaaagacc cggtttcccg gcatgccaaa cagcctcgac gcgctgtgcc gccggtttgc
      961 catcgatctg tcgcaacgga ccacgcacaa cgcgctactc gactgccggc tgctggcaga
     1021 ggtctacgtc gaactcaccg gcggtcggca acggggtctg ggactggcgg cgcagacctc
     1081 aaccgcgccg gtcgcggttt acgtccatac cggcccgcgc agcggccgcc gtctggtgcc
     1141 ggacgaggct gccctcgccg cccatgctgc catgctgtcg cgcctgaagg acccggtctg
     1201 gttggcctga tcgccggcgg cttcccggct acgccggctt atcacggacg cgattgttga
     1261 ccatccggct ggtggaacct atttgagcac aggtcatttg ggccaaggcg ccccacgaag
     1321 gattacatgt tcgcatccct ggcccgagcg gtattcccga actccaacga tcgtgcactg
     1381 aaatcctatc agcgccgcgt gccgaaaatc ggcgcgctcg agcccgcgat ggaggcactg
     1441 tccgacgagg ccctggcggc aaagaccgtc gaattccgcg accgcctggc gcaaggcacc
     1501 aggctcgacg acctgctgcc cgaggctttt gccgtggtcc gcgaggcgag ccggcggacg
     1561 cttggccagc gccacttcga cgtgcaaatg gtcggcggca tggtgctgca cgagggcaag
     1621 atcgccgaga tgaagaccgg cgaaggcaag accctggtcg cgacgctgcc ggtctatctc
     1681 aacgcgctga ccggtaaggg cgtgcacgtc gttacggtga acgattacct cgcccgccgc
     1741 gacgccgagt ggatggggca gatttacaag ttcctcggca tgaccgttgg cgtgatcgtg
     1801 cacgatctgg atgaggtgca gcgccgcgag gcgtacaaca gtgacatcac ctacggcaca
     1861 aataacgaat tcggtttcga ctacctgcgc gacaacatgc gctaccggct ggaggaaatg
     1921 gtccaacgcg acttcaattt cgcgatcgtc gacgaggtcg actcgatcct gatcgatgag
     1981 gcgcggacgc cgctgatcat ttcgggaccg tcggacgaaa gttcggattt gtaccgccag
     2041 gtcgatgcgg tgatgaaaat cctgtcggcc gatcccgaca cctacgagaa ggacgaaaag
     2101 caacgcaccg ttgcgctgac cgagccgggc gccgaacggt tggaagatat gctgcgtgaa
     2161 gccggcgtgc tgaccgaagg caatttgtac gacattttca atgtctcggt ggtgcaccac
     2221 gcgcagcagt cgctgcgggc gcatacgctg tattcacgcg atgtcgacta tatcgtgcgc
     2281 aacggcgagg tcattctcat cgacgagttc accggccgca tgatgatcgg ccggcggttc
     2341 tcggagggat tgcaccaggc gctggaggcc aaggaacacg ttaccgttca gccggagaac
     2401 cagacgctgg cgtcgattac gttccagaat tatttccggc tgtatccgaa actcgccggc
     2461 atgaccggca ccgcgatgac tgaagcggac gaatttgccg aaatctacaa gctcgaagtg
     2521 attgaaattc caaccaatgt gacggtcatc cgcaacgacg aacacgacga ggtctatcgc
     2581 accgccgagg aaaaatacga ggcggtggcg aagttgatcg acgaggctcg gtcgcgcaag
     2641 caaccggtgc tggtcggcac cacgtcgatc gagaagagtg aaatcatcag cgagctgctg
     2701 aagaaaaagc gcgtgccgca cgccgtgctc aacgcgcgct accatgaaca ggaatccgaa
     2761 atcgtcgccc aggccggtgc gccgggcgtc gtaacgatcg caaccaacat ggcgggccgc
     2821 ggcaccgaca tcaagttggg cggcaatctc gagatgcggt tgcgcaacga actcgacggc
     2881 gtcaccgacg aggcaacccg ggaagccatc acggaaaaag cccgtgcgga gatcgccgct
     2941 gcgcatgacg ttgtgaagca ggccggcggt ttgctggtcg tcggcaccga gcgtcacgaa
     3001 agccgccggg tcgacaatca gttgcgtggc cggtccggac ggcaaggcga tcctggacag
     3061 tctcggttct tcctgtcgct ggaagacgac ctgatgcgca tcttcggttc cgaccggatg
     3121 ggcggcatgc tgcaaaaact tggtctgcag cagggcgagg cgatcgttca tccgtggatc
     3181 aacaaggcac tcgaaaaagc gcagaaaaag gtcgaggcgc gcaacttcga catccgcaag
     3241 aacctgctca agttcgataa cgtgatgaac gacc
//
LOCUS       DATAVD010001415         2257 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2741027, whole genome shotgun sequence.
ACCESSION   DATAVD010001415 DATAVD010000000
VERSION     DATAVD010001415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2257
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2741027"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..486)
                     /locus_tag="VHX39_27100"
     CDS             complement(<1..486)
                     /locus_tag="VHX39_27100"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEX3994861.1"
                     /translation="MTAGIIRIGIAGWTYAPWRGVFYAKEITREQELAYAASRLRTIE
                     INDTFYGLQRPEIFASWAEQVPADFVFAVRAPRIITHVLRLRDVRVPLANFMASGLLR
                     LGIHLGPILWRFPLNFRFDPERVGAFLKMLPHDTGHAAGLGRGHDKALRGRAWLDVDT
                     RR"
     gene            789..947
                     /locus_tag="VHX39_27105"
     CDS             789..947
                     /locus_tag="VHX39_27105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994862.1"
                     /translation="MKHLLERTLLYPGDKLCDVCHVQAGDDRMMIRTLINMLVWNLVA
                     LLLVLILY"
     gene            958..1404
                     /locus_tag="VHX39_27110"
     CDS             958..1404
                     /locus_tag="VHX39_27110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="group III truncated hemoglobin"
                     /protein_id="HEX3994863.1"
                     /translation="MSATAPLTGITEASIGLLIDGFYIAVRRDPVLGPVFEAAIGEDE
                     WPRHLATMRNFWSSVMLTSGRYSGNPVAVHRAVQGLERPMFARWLALFEATAADLFAP
                     EQAALFADKANRIATSLQLAIFHRLGAPPDGLPPRTAPQNRASRCA"
     gene            1395..1844
                     /locus_tag="VHX39_27115"
     CDS             1395..1844
                     /locus_tag="VHX39_27115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011252430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEX3994864.1"
                     /translation="MRLTAYTDYTLRTLMYLAVDTGRPATIAEIARTYRISETHLMKI
                     VHQLGVAGDIETIRGRNGGIRLGKPAAAINLGAVVRRTEPDMDLVACFGDTETCAIGQ
                     ACVLRNALHQALAAFLTVLDGYTLADLVAPRQQLGALLGLAAMPGTD"
     gene            complement(1875..>2257)
                     /locus_tag="VHX39_27120"
     CDS             complement(1875..>2257)
                     /locus_tag="VHX39_27120"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX3994865.1"
                     /translation="AVLGYTIGNDVSERSWQKADRTMWRSKNTDTFKPMGPWIETDIK
                     LEDLVTKIRLNGEQLIEFPTNHMIFGVVDYLVAMTSCLTLVPGDMIWMGTEGATANMK
                     HGDRIEVEISGIGTLSNPVVREGR"
BASE COUNT          406 a          714 c          688 g          449 t
ORIGIN      
        1 gcgccttgta tcgacatcga gccacgcgcg cccccgcaat gccttgtcgt ggccacgtcc
       61 caggccggcg gcatgcccgg tatcgtgcgg cagcatcttc aggaacgccc ccacacgctc
      121 cggatcaaaa cggaaattca acggaaaccg ccacaggatc ggaccgagat ggatacccag
      181 ccgcagcagg ccggaggcca tgaagttcgc cagcggcacc cgcacatcgc gcagccgcaa
      241 gacatgggtg atgatacggg gtgccctgac cgcgaacacg aagtccgccg gcacctgctc
      301 ggcccagctt gcgaagattt ccggacgctg caggccgtag aaagtatcgt tgatctcaat
      361 ggtgcgaagc ctgctggcgg cataggccag ttcctgctcg cgggtgatct ccttggcata
      421 gaacacgccc cgccacggcg cgtaggtcca acccgcaata ccgatgcgga tgattcccgc
      481 ggtcatcgaa tttcaggaca gggtcgcgtc gcgtttgcca tggcctatga ttatcggcag
      541 tcggattgca ttccatatca aaattacaac tattcgtata ggttcgtatg tgaaacgctc
      601 gctccgacga atcccgcgcg catcggcttg ggtcggccac gtgccgatcc ggacagttcc
      661 atcgcggccg cggcatggct gatgacgcgg cggcatcggg aacatcggta aagaggtact
      721 ttcaatattg ctgtatggcg tgcgtgccac tataacctac attctaaatc gatcttatag
      781 gcaatggtat gaaacacctg ctggaacgca ccttgcttta ccccggcgac aagctttgcg
      841 acgtctgcca tgtgcaagcg ggtgacgacc gcatgatgat ccgcacgttg atcaacatgc
      901 tggtgtggaa tcttgtcgcg ctgctcctcg ttctgatcct ctactgaggg cctgttcatg
      961 tccgccaccg ccccgctgac cggtataacc gaggcgtcga tcggcctgct gatcgatggc
     1021 ttctacatcg ctgtccgccg cgatcccgtc ctcggtccgg tgttcgaagc cgcgatcggc
     1081 gaggatgaat ggcccaggca cctcgcgacg atgcggaatt tctggtcgtc cgtcatgctg
     1141 acctccggcc gctattcggg caatccggtt gccgtgcatc gcgccgtgca gggtctggaa
     1201 cgcccgatgt tcgcgcgctg gctggcgttg ttcgaggcca ccgcggccga tctgttcgcg
     1261 cccgaacagg ccgcgttgtt cgcggacaag gcaaatcgga tcgccaccag cctgcaactc
     1321 gcgatattcc atcggctggg cgcgccgccg gacgggctgc cgccgcgcac cgcgccgcaa
     1381 aaccgagcgt cacgatgcgc ctgacggctt atacggatta tacgctgcgg acgttgatgt
     1441 atctggcggt cgacaccggc cgtccggcca ccatcgccga gatcgcgcga acctaccgga
     1501 tctcggaaac ccatctgatg aagatcgtgc atcagctagg cgtggccggc gatatcgaga
     1561 cgatacgcgg cagaaacggt ggcatccgcc tgggcaagcc ggccgctgcc atcaacctcg
     1621 gtgccgtggt ccggcgcacc gaaccggaca tggatctggt ggcctgtttc ggcgacaccg
     1681 agacctgtgc catcggccag gcctgcgtgt tgcgcaatgc cctgcatcag gcgctcgcgg
     1741 cgttcctgac cgtgctcgac ggctataccc tggccgatct tgtcgcgccg cgacaacaac
     1801 tgggggcgct gctgggactg gcggcgatgc cggggacgga ctgacggacg gtccgtcgta
     1861 tcagcaacgc tgcgctatcg cccttcccgc acaacggggt tgctcagggt gccgatgccg
     1921 ctgatctcga cctcgatacg gtcgccgtgc ttcatgttgg cggtcgcgcc ttcggtgccc
     1981 atccagatca tgtcgccggg aaccagggtc aggcagcttg tcatggcgac caggtaatcg
     2041 accacgccga agatcatgtg gttggtcggg aattcgatca gctgttcgcc gttcaggcgg
     2101 attttggtga ccaggtcttc gagtttgatg tccgtttcga tccatggccc catcggcttg
     2161 aaggtgtcgg tgttcttcga ccgccacatc gtgcgatcag ccttctgcca ggagcgttcg
     2221 ctgacgtcgt tgccgatggt ataacccagc acggcgg
//
LOCUS       DATAVD010001416         8657 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1434258, whole genome shotgun sequence.
ACCESSION   DATAVD010001416 DATAVD010000000
VERSION     DATAVD010001416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8657
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1434258"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1242)
                     /locus_tag="VHX39_27125"
     CDS             complement(<1..1242)
                     /locus_tag="VHX39_27125"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX3994866.1"
                     /translation="MRLSVPGTTRTGAIVAIQFDDRPIEALAGETIAAALSAAGILSF
                     RRTPSGAPRGLHCGMGACQDCVVTIDGRIGQRACITPVRAGMVVRSEPPTVILPIGTT
                     PAPEERHPDILVVGAGPAGLAAATAAAEAGAAVTLLDERAATGGQYTKPLGGALHDAA
                     PDARFRLGLLARERAQLAGVTIETDALVWAAFAPDEIAVLLRGTAVTFRPQRLILATG
                     AHERPVPIPGWTLPGVLTTGGLQTLVRTQLVCPGDRVLLAGTGPLNLQVACELLARGV
                     KPVAVLDSAPPPWTTPWRNTMQMLTAALGLLAEGMRMLRTLRRAGVPVFWSTSLVGLT
                     GLERVAEAVLPGRAIPVDVVALNAGFQPEVALARALGASHRYEDRGLGHLETVTDGDG
                     RTFVRSVFAVGDGAALGGARVA"
     gene            1487..2884
                     /locus_tag="VHX39_27130"
     CDS             1487..2884
                     /locus_tag="VHX39_27130"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994867.1"
                     /translation="MFARLDAARSLTGNQLKIVAAAIIGDMLEFFDYFLIAFVLAFII
                     KPWQLTGGQSAIILLSSGIGAILGAAIWGRIADLYGRRRVFMLTVLNFSLATGLIYFT
                     PENGWVYLSVMRFFVGFGVGGLYCVDLPLVQEFVPARMRGFIGGLVTVFIPLGVMIAS
                     SFAAFTTNAIGWRGLFVVGLVPAAFTLVIRGWVPESPHWLMTQGRREDARRSIAWALQ
                     VAPETLPLSDALPVQEHAAWSDLFKYPRSLAVSWMASIGAQTAGYGIILWAPTLFVLQ
                     LGVTPAYAAYLFLWVSLAGIAGRVAFSLLSELIGRRPAGIVLGFGGMICIATAGIGHN
                     VMIGSVSLFWLMIVFADFFYDGGFAVIGPYMAEVWPTRLRTTGMGSAYGFGGLGKIIG
                     PLGLALMIGASDVIKPQATVAAIVPGFLYFAAWMALCGCAFLFFGFETGRQSLTDIDA
                     ALQSAPAIERQQEAD"
     gene            3041..4297
                     /locus_tag="VHX39_27135"
     CDS             3041..4297
                     /locus_tag="VHX39_27135"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994868.1"
                     /translation="MLTWLRDLTARERRTMTACWAGWTLDGFDQQLYSYVVPTMIGLW
                     GLTPGAAGTIGTVTLLTSSLGGWLAGSLADRFGRVRVLQFAILWYSLFTFLCSFAQNF
                     EQLFVLRALHGVGFGGEWAAGSVLMGEVIRDKYRGRGVGFVQTGAAFGPGAAALVYAG
                     LYAVLPEAIAWRALFAVGILPALLVFWVRRSINESDAFQARREGRPQTSAAAQLFSAF
                     RGAYLWTTVKLVLMVAGAQGGVFAVQFWMPTYLRTVRGLSASTTGTFVFIQMIGALIG
                     FLLGAYLSDIIGRKLTFFLSAATTAIMVLIFMFVPMGNTAVLLTGIPLSTAILMKFSP
                     MGPFMTELYPTEVRGTGQGIGYNGGRAIGSFFPTMVGYAAPSLSLGTSIAVFCVLSCI
                     LMMVMLLTLPETHGRVIAELETGATG"
     gene            complement(4725..8024)
                     /locus_tag="VHX39_27140"
     CDS             complement(4725..8024)
                     /locus_tag="VHX39_27140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEX3994869.1"
                     /translation="MANKMLIDATHPEETRVVVLRGNRVEEFDFETAHRKQLRGNIYL
                     AKVTRVEPSLQAAFVEYGGNRHGFLAFSEIHPDYYQIPVADRQRLLDLQAEQARLEDE
                     EDDLELALNQTVAANSEGAALAEPEDAAPPLAVAEPWAQADLPRLLAPVEPEPATPVA
                     DLVAEAAAADPSAQIEAEAAVEEHTAEEHSVAEHNGTENSGMERNGTEPWAIAALPAL
                     IVAEPSISAAEPAFADDEQPDSGDDLDIFGAIPEEAPPETIGGDADSDSENGDERPER
                     RIPPRFLRNYHIQEVIHRRQILLVQVVKEERGTKGAALTTYLSLAGRFSVLMPNSPRG
                     GGISRKITSAADRRRLKEIMVELDIPKGMGLIVRTAGAQRPKPEIKRDCEYLLRLWDD
                     IREHTLKSIAPALIYEEASLIKRAIRDVYSRDIDDITVDGEDSWRAAHEFMRMLMPSH
                     ARKVHLWPDQGQSLFARFQVEAQLDAMLQPTVQLRSGGYLVINQAEALVAIDVNSGRS
                     TRERNVEETALRTNLEAADEVARQLRLRDLAGLIVIDLIDMESKRHNAMVERRLKEAL
                     RDDRARIQVGHISHFGLLEMSRQRLRPSLEETTLIICPHCNGTGHVRGTESAALHVLR
                     GVEEEAGKRRSAEIIVHVAVAIALYILNHKRERLNEIERRYGMRVIIAADDSMIAPRF
                     RIERLRTLAPGEEPRFVTPDAPRTAVVPAPVSGAGYVMPAEPVDVEEDEDSAEFEADE
                     ADARTAAANGEDTEESREAERRRRRRRRRRGGREEKPRVSDNVSAPDQTFEPVTVVEP
                     VDTAPEPMAEPVSGPAGGDDEAARRRSRRGRRGRGRDGDLSPLGVPGAEQPDLVPAYA
                     GPTPADPFGSGHVFDIFDVMEQAELNAAQASRPPASRRGAGSRSRWQPPHWAVAGQPP
                     MLVGEPAAADRPERAPAMESWALPSRPFMLRRDRHAPRWSQNRGAPARAPSNGTVVPE
                     ATEPAGLRARPVPIEAGPPPTPEPVALPVVDQQIHQTADVAPPAVEAAPEVAVVAEPD
                     ALAELSSEAAAEPSLVAEASESVAPERQLDDAPPVPANDVVSGPLVQPIVIGSESTPP
                     LERKRGWWRRR"
BASE COUNT         1459 a         2749 c         2762 g         1687 t
ORIGIN      
        1 ggcgacccgt gcgccaccaa gagccgcccc atccccaaca gcgaacaccg acctgacaaa
       61 ggtgcggccg tccccgtcgg tcaccgtctc cagatgaccg agaccacgat cctcgtagcg
      121 gtgcgatgcg ccaagtgccc gcgccagagc gacctcgggc tggaacccgg cgttgagtgc
      181 aacgacatcc accgggatgg cccggccagg caaaaccgct tcggcaaccc gctccaaccc
      241 agtcagcccc accaaagagg ttgaccaaaa caccggaacg cccgcgcgcc ggagtgtccg
      301 tagcatccgc atcccctcgg ccagcaggcc aagtgctgcg gtcagcatct gcattgtgtt
      361 gcgccacggc gtcgtccagg gaggcggtgc gctgtccagc actgccacgg gtttcacgcc
      421 acgggcgagc aactcgcacg ccacctgcag gttcagcggt ccggtaccgg ccagcaacac
      481 gcgatctccg ggacatacca gctgagtgcg gaccaaggtt tgcaggccgc cagtggtcaa
      541 cacgccgggc aaggtccagc ccgggatcgg cacgggccgc tcatgcgcgc cggtcgccag
      601 gatcagccgc tggggacgaa aggtcaccgc ggtgccacgg agcagaacgg cgatctcatc
      661 aggcgcgaaa gcagcccaga cgagcgcatc ggtctcgatc gtcacaccgg ctagctgcgc
      721 gcgctcccgg gccagcaggc ccaaacggaa gcgcgcgtcc ggcgcggcat cgtgcaaagc
      781 tccacccaac ggcttggtgt actggcctcc ggtcgcggcg cgttcatcca acagcgtaac
      841 ggctgccccc gcctcggccg cggcggtggc ggcagcgaga ccggccggac ccgcaccaac
      901 caccaggatg tccggatgcc gctcttccgg cgcgggcgtg gtgccaatgg gcaaaataac
      961 ggtgggcggc tccgagcgga ccaccattcc cgcgcgcacc ggcgtaatgc aggcgcgttg
     1021 gccgatccgg ccgtcaatcg ttacgacaca gtcctgacag gcgcccatgc cgcaatgcag
     1081 gccacgcggc gcgcccgacg gcgtgcggcg gaacgacaga atgcccgcag ccgacaacgc
     1141 agcggcaatc gtttcgccgg ccagagcttc aatcggacgg tcgtcgaact ggatcgcgac
     1201 gatcgcaccg gtacgggtcg ttcccggaac agagagcctc atagccagaa ccttgccagg
     1261 gctggtcggg cgtgcgccag ccccgctcgc gcatgccaca acgtggccgt gcgtaacgta
     1321 tgatatatgc agacgtcaga acgttgtcgt agccctgtag gtccagaccg ctcacgtcag
     1381 gcccttgacc tggaccatcg ttgtcgtctg catggggttg gctcgtagcc tggatcaacc
     1441 aggcaagccg gctaattaca taccagtgac gaccggagga atacgaatgt tcgcccgcct
     1501 cgacgccgca agatcgctga ccggcaacca actgaagatc gtcgccgctg cgatcatcgg
     1561 ggatatgctg gagtttttcg attacttcct gatcgcattc gtactcgcgt tcatcattaa
     1621 gccctggcaa ctgaccggcg ggcaatccgc catcattttg ttatcctccg gcatcggcgc
     1681 gattttgggt gcggccattt ggggccggat tgccgatctt tacggccgcc gccgggtatt
     1741 catgctgacc gtgctcaact tctccctggc gaccggcctg atctatttca caccggaaaa
     1801 cggctgggtc tatctgtccg tcatgcgctt cttcgtcggc ttcggcgtcg gtgggcttta
     1861 ctgcgtcgat ctgccccttg tgcaggagtt cgttccggcc cgcatgcgcg ggttcatcgg
     1921 cgggctggtc accgtattca ttccgctcgg cgtcatgatt gcctcatcat tcgcggcatt
     1981 caccacaaac gcgatcgggt ggcgcggcct gtttgtcgtc ggcctggtgc cagcggcgtt
     2041 cactttggtc atccgaggct gggtcccgga atccccgcac tggctcatga cccagggtcg
     2101 ccgcgaagat gctcgccgct ccattgcctg ggctttgcag gtcgcacctg aaacattgcc
     2161 tctgtcggat gcgctgccgg tgcaagagca tgcggcatgg agcgatcttt tcaaatatcc
     2221 acgcagcctg gcggtgtcct ggatggcgag tattggtgcg caaacggccg gttatggaat
     2281 tatcctgtgg gcgcctacgt tgttcgttct gcagctcggt gttaccccgg cttatgcggc
     2341 gtatttgttc ctttgggttt cgctggccgg cattgccgga agggtcgcgt tctcgttgct
     2401 gtcggagctg atcggccggc ggcccgcggg tattgttctc gggttcggcg gcatgatttg
     2461 catcgccact gccggcatcg ggcacaacgt catgatcggg tcggtgtccc tgttctggct
     2521 gatgatcgtt ttcgccgact tcttttacga tggcggtttc gcagtcatcg gaccgtacat
     2581 ggcggaggtt tggccgaccc gtttgcggac gaccggcatg ggatccgcct atgggttcgg
     2641 cggtctcggc aaaatcatcg gtccgcttgg cctcgcgttg atgatcggtg cgtccgacgt
     2701 catcaagcca caggcaacag tcgccgcgat cgttccaggg ttcttgtatt tcgctgcatg
     2761 gatggcgcta tgcgggtgcg ccttcctgtt cttcggattt gagaccggac gtcaatcgct
     2821 gaccgacatc gacgcggcgc tgcagtccgc tccagcgatc gagcggcagc aagaagcgga
     2881 ttgagcatgg aagccacgac aaaacgtcag gttgacgaaa ccggcgtggc ctgaccgcaa
     2941 tcatccctat cgtcgccgaa ctcatgccat ctccgacgat agtggaacga ggcgccgacc
     3001 gtggccaaca cggcggccgc cactctttgg aggaaacgta atgctgacgt ggcttcgcga
     3061 cctgaccgcc agggaacgcc gcaccatgac cgcctgttgg gccgggtgga cattggacgg
     3121 ctttgaccag caactttaca gttacgtcgt cccaacgatg atcggactgt ggggtctcac
     3181 gcccggtgcc gccgggacca tcggcaccgt cacattgttg acctcgtcgc tgggtggctg
     3241 gttggcgggc tcgctggccg atcgtttcgg ccgtgtgcgc gtgctgcaat ttgcgatcct
     3301 gtggtactcg ctgttcacgt tcctgtgcag tttcgcacag aatttcgagc agctgtttgt
     3361 gttgcgggca ttgcacgggg tcggcttcgg cggcgaatgg gcggccggtt cggtgttgat
     3421 gggtgaggtc attcgcgaca aataccgcgg tcgcggcgtc ggctttgtgc agaccggtgc
     3481 agccttcggg cccggagcgg cggcgttggt gtacgcgggt ttatatgcgg tgctgccgga
     3541 ggccattgcc tggcgcgctt tgtttgcggt tggcattctg ccggcgctgc tggtgttctg
     3601 ggtgcgtcga agtatcaatg aatcggacgc atttcaggcg cgtcgcgagg gacggccgca
     3661 aaccagcgcc gccgcgcaac tgttttccgc gttccgcggt gcgtatctat ggacgacggt
     3721 caagctcgta ctgatggtcg ccggtgctca gggcggtgtc ttcgccgtgc agttctggat
     3781 gccgacctat ctgcgtacgg tgcgaggatt gtccgcctcc accaccggca cgtttgtgtt
     3841 tatccaaatg ataggcgcgc tgattgggtt ccttctgggt gcgtatctaa gcgacatcat
     3901 aggccgcaaa ctgacgttct ttctttcggc ggcaacgacg gcgatcatgg tactgatctt
     3961 tatgttcgtg ccgatgggga ataccgcggt gctgctgacc gggatcccgc tcagtaccgc
     4021 gatattgatg aagttctcgc cgatgggacc gtttatgacc gaactctatc cgaccgaggt
     4081 ccgcggcacc ggtcagggca ttggctacaa cggcggacgg gcgatcggct cgttttttcc
     4141 gaccatggtg ggatatgcgg cgccgtctct ttcgcttggg acgtcgattg cagtgttttg
     4201 cgttttgtcc tgcattttga tgatggtgat gctgctgacg ctgccggaaa cccatggcag
     4261 ggttattgct gaacttgaga cgggggcgac tggctaaggg gagtcgatcg gtatcacgcg
     4321 caatgaaagt gttcgtcggc ggaatgacgc gttggtgcag gacacaagcg gcagtcaggt
     4381 tcgggggccg taagtttaac aaccggatgg ggtcgcttgt tatccggtct cgttggagcg
     4441 gttcgtgcgc gtcgcacggc tccattattc ccggaggtcg cggaggacgc ggagaagagt
     4501 gccgactaaa cacgcacatt gcgaagcttc tcagcgtcct ccgagcactc cgcgatctcg
     4561 gcgaaattgc cttgggttca caacgcacaa gcctgtctcg ggagactcga aatgatgtcg
     4621 gcgttcacgg atgcgcgcga tgactgacca atgctccgta tatcccgtgc cggaatgcac
     4681 ggcaggccga cgtcacagcc gcaactgata cagcgctcag actatcacct tcgccgccac
     4741 cagccgcgtt tccgttccaa tggaggggtc gattccgatc cgatcacgat gggctgaacc
     4801 agcgggccag acacgacatc gttcgccggg accggcggcg cgtcgtccag ctgccgctcc
     4861 ggcgccacgc tctcggaagc ttcggcgacc agtgacggct cggcagcagc ctcagatgac
     4921 aattccgcca gtgcgtctgg ctctgccaca acggcaactt caggtgcagc ttcaacggcg
     4981 ggcggcgcca cgtcggccgt ctggtggatt tgctgatcca cgaccggaag tgcaaccggt
     5041 tccggcgttg gcggcggacc tgcctcgatt ggcaccggcc gcgcgcggag gccggccggc
     5101 tcggtcgcct caggcacaac ggttccgttc gatggtgctc gcgcaggagc accccgattc
     5161 tgcgaccagc gcggcgcatg ccgatcccgg cgcagcatga atggccgcga cggcaacgcc
     5221 caggattcca ttgccggtgc gcgctcggga cgatctgccg cggctggctc gcctaccagc
     5281 atcggcggtt gcccagcgac ggcccaatgc ggcggctgcc agcgggagcg gctgccggcc
     5341 ccgcgccggc tggccggcgg ccgactcgcc tgcgcggcgt tcagttcagc ctgctccatc
     5401 acatcgaaga tatcgaagac atggccgctg ccgaatggat cggcgggggt tgggccggca
     5461 taggccggaa caaggtcggg ttgctcggca cccggcacgc ccaacggaga caaatcgccg
     5521 tcacgccccc ggccacggcg tccccgacgg gaccggcggc gagcggcctc atcgtcgccg
     5581 ccagcaggcc ccgagaccgg ctcggccatc ggctccggag cagtgtccac cggctcaacc
     5641 acggttaccg gttcgaatgt ctggtccggt gccgaaacat tatccgacac tctcggtttt
     5701 tcctcgcgcc cgccgcgccg ccggcgacga cgccggcgcc ggcgctctgc ctcccggctc
     5761 tcctcggtat cttcgccgtt cgcggccgcc gtcctggcat ccgcctcatc agcttcgaac
     5821 tcggcgctat cctcgtcttc ctcgacatcg accggctccg ccggcatcac gtaaccggca
     5881 ccggagaccg gagcaggcac cacagcggtt cgcggtgcgt cgggtgtaac gaagcgcggc
     5941 tcctcacccg gcgccaaggt gcgcagccgt tcgatgcgga accgcggtgc gatcatcgaa
     6001 tcgtcagccg caatgatcac gcgcatgcca tagcgccgct cgatctcatt cagccgttca
     6061 cgcttgtgat tgaggatgta cagcgcgatc gccaccgcga catgcacgat gatttcggcc
     6121 gaccggcgct tgccggcctc ttcctccacg ccgcgcagca catgcagtgc ggcgctttcg
     6181 gtgccacgca cgtggccggt gccgttgcaa tgcgggcaaa tgatgagagt ggtttcttcg
     6241 agcgacggac gcagcctctg ccggctcatt tccagcaggc cgaaatggct gatatggccg
     6301 acctggatgc gcgcgcggtc gtccctcagc gcctccttca ggcggcgctc gaccatcgcg
     6361 ttgtgccgtt tcgactccat atcgataagg tcgatgacga tcagacctgc cagatcgcgc
     6421 aaccgcaatt gccgcgccac ttcgtcggcg gcttcgaggt tggtgcgcag cgcggtttcc
     6481 tcaacgttgc gttcccgtgt cgaacggccg gagttgacgt caatcgcaac cagcgcctca
     6541 gcctggttga tcaccagata gccgcccgag cgtagctgaa ccgtgggctg caacattgcg
     6601 tcgagttgcg cttccacctg gaagcgggcg aacagcgact ggccctgatc cggccaaaga
     6661 tgcaccttgc gggcgtgcga cggcatcagc atgcgcataa actcgtgcgc cgcccgccag
     6721 gagtcttcgc catcgacggt gatgtcgtcg atatcgcggg aataaacgtc gcggatggcg
     6781 cgcttgatga ggctggcttc ctcatagatc agcgctggcg cgatggattt cagcgtgtgc
     6841 tcgcgaatgt cgtcccacag ccgtaacaga tactcgcaat cgcgcttgat ttccggcttc
     6901 ggtcgttgcg cgccggcagt gcggacgatc aggcccatcc ctttcgggat gtccagttcg
     6961 accatgatct ccttcaaacg gcggcgatcc gcggccgagg taattttccg ggaaatgccg
     7021 ccgccgcgcg gcgaattcgg catcagcacc gagaaccggc cagccagcga aagatacgtg
     7081 gtcagtgcag cgcctttcgt cccgcgctcc tccttgacca cctgcaccaa caggatctgg
     7141 cggcggtgga tcacttcctg gatgtgataa ttgcgcagga accgcggcgg gatacggcgc
     7201 tcgggccgct cgtcgccatt ctcggagtcg ctgtcggcat cgccgccgat ggtttcgggt
     7261 ggcgcttcct cgggaattgc tccgaagatg tcgagatcgt caccgctgtc aggttgttcg
     7321 tcgtccgcga acgccggctc ggcagcactg atcgacggtt ccgcaacgat cagggccggc
     7381 agggctgcaa tcgcccaagg ctccgtgcca ttgcgctcca tgcccgagtt ctctgtgccg
     7441 ttgtgttcag caacggaatg ttcttcagcg gtgtgttctt caacggcggc ttcagcctcg
     7501 atctgcgccg acgggtcagc ggcagcggct tcggcaacca gatcggcaac cggcgttgcc
     7561 ggttccggct caaccggtgc gagaagccgt ggcaagtccg cttgtgccca aggttcggcg
     7621 acagccagag gcggcgcggc atcctcgggc tccgctaggg cggcgccttc agaattcgct
     7681 gcgacagtct ggttcagtgc gagttcgaga tcgtcttcct cgtcttcgag ccgtgcctgt
     7741 tcggcctgca gatccagcag gcgctgccga tcggcgaccg ggatttgata gtagtccgga
     7801 tggatttccg agaacgccag gaagccatga cggttgccgc catactcgac gaacgccgct
     7861 tgcagcgacg gttcgacgcg agtgaccttg gctagataga tgttgccgcg aagctgtttg
     7921 cggtgcgcgg tctcgaagtc gaattcctcg acgcggttgc cgcgcagcac gaccacccgg
     7981 gtctcctcgg gatgggtcgc gtcgatgagc atcttgttgg ccattgaaca atctctttac
     8041 ggcgagtcgg ctcgcagccg ccggcgaacg gcggcgcgaa cagggacagg cctgatttgt
     8101 cgtggaggag atgggtcacg gagccacgcc ttggcgcggt gcaggcccgg cggcaaaggc
     8161 gcgcgctcgc gaacgagcaa cgctccggcc ggaccttgaa aaacacgtcg ggcatgacct
     8221 caacccgttg gaggacggca acgcacggcg tcaccggtcg tctgtgctca cgattggcgc
     8281 ggtgattgcg cctgggcgcg gccgcgtcag tcgggtgtcc tgaacaagag cctcggcttc
     8341 gaccggtcgc cgttaaaacc gcctggtttc gcaaaagctg gtttcgcaaa atttcggcgc
     8401 gaacgggggg atcggtcgca tctcgtccgc caagccggtt cccccgatgc ctctggaggg
     8461 ggaagcaaat ccttggcgca cgcgccggag ggccgaacac ggcacacccg gttactcaaa
     8521 ccgtgagcaa cccctactta cggcccgaat ccgccgatgg caagtaggtc gctgaaacgc
     8581 cacacaaatc acaggcttgt ggcagggcct taagttccgg ttaaccaccc gatcctaatg
     8641 gagtaagagg gtctcgg
//
LOCUS       DATAVD010001417         8284 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1995268, whole genome shotgun sequence.
ACCESSION   DATAVD010001417 DATAVD010000000
VERSION     DATAVD010001417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8284
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1995268"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..565
                     /locus_tag="VHX39_27145"
     CDS             <1..565
                     /locus_tag="VHX39_27145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010666193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX3994870.1"
                     /translation="HGTQGHVAYPHRADNPVHRLVAALQVLTAAPIDAGTDWFEPSTL
                     QLTSIDVGNTATNVIPPSARAALNIRFNEKHSGASLIAWVKATIGRYAERFDVDATIS
                     GESFVTKPGPMVDILRHAIVKATGVEPKLDTGGGTSDARFIANYCPVAEFGLVGATMH
                     QTDERVPVAELRDLAQVYHDVIAAFLA"
     gene            562..1134
                     /locus_tag="VHX39_27150"
     CDS             562..1134
                     /locus_tag="VHX39_27150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994871.1"
                     /translation="MTAMRRRTVPPILRGVGLIARGRAAGLNCFRDTPQAFLTSLAPG
                     LGIMAASVVEGLAEGNAARAITEIPGTLCVLLAPSVLSYEMARFWGREAFWNRYIVAF
                     NWCQWLLPVIAFVLLGGLSLAQMGGIDPDIGLPAVVVCLAGYALWLNWFLARHGLALS
                     KWRAAGLVATVNAGTMAIVFGPTLIAAYFT"
     gene            1131..1694
                     /locus_tag="VHX39_27155"
     CDS             1131..1694
                     /locus_tag="VHX39_27155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994872.1"
                     /translation="MSVISAVASGVQGALMLARGRPEGIERVEADQTAVIHSFWAIPL
                     SLPAVVCLQLLDWLATGIPANVPEELSRYLMLFLIGWLAFVWLSHGLAKRLHRQPLWP
                     RFIAIWAYCSIIENTLVAIGALPGALGAPTILDEACQLITMGWALWLEWYAIRLSLQV
                     GPLIAVLLLLVDFGIGAILNAVGALAG"
     gene            complement(1981..2397)
                     /gene="dksA"
                     /locus_tag="VHX39_27160"
     CDS             complement(1981..2397)
                     /gene="dksA"
                     /locus_tag="VHX39_27160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HEX3994873.1"
                     /translation="MLITLPPDYRPSEDEEFMNPLQVEYFRQKLLRWRGELLKEADGT
                     LLSLSQGGILEPDITDRASVETDRALELRTRDRARKLISKIDQALGRIENGSYGYCEE
                     TDEPIGIRRLQARPIATMSIEAQERHERMERVHRDD"
     gene            complement(2564..2998)
                     /locus_tag="VHX39_27165"
     CDS             complement(2564..2998)
                     /locus_tag="VHX39_27165"
                     /inference="COORDINATES: protein motif:HMM:NF022227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0044781 - bacterial-type flagellum
                     organization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliX"
                     /protein_id="HEX3994874.1"
                     /translation="MVDGVRASDIGAATPLPRDGTKTVLGQFTVDDGPAPLNKQGRLA
                     SVAGIGLESMLALQAVDEAAERDRAAYKRGTAMVAALNRLQRAMLAEEDPSSALNALH
                     ELAGDGPLADDPELGAIVRAVVLRSRVELARRASVWSGQHAG"
     gene            3221..4300
                     /locus_tag="VHX39_27170"
     CDS             3221..4300
                     /locus_tag="VHX39_27170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011252198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HEX3994875.1"
                     /translation="MLAVLLVTGQPAFGQIRIKDIADVEGVRSNQLIGYGLIVGLAGT
                     GDKLDNAVFTRESLIGMLERLGVNTRDQSAKLQTKDLAAVMVTAELPAFTHTGSRIDV
                     AVSALGDATNLTGGTLLVTPLLAADGEVYAVAQGAVATGAIAARGAAASVSRGVPTAG
                     QIANGAIVEKEVAFRLDKAGSTLRLGLRNPDLTTALRISAVINRAIGPISKAVDPRTV
                     LLDLASRNPIEVLGRIENLRIQPDNPATVIIDEASGTIVMGDAVRISTVAIAQGNLTI
                     RVTETPQVSQPGAFSNGTTTTVPRTQIQVDDGRDKKLGILDSGVTLRDLVASLNALGV
                     GPRDLISILESIKAAGALQADLQVR"
     gene            4300..4587
                     /locus_tag="VHX39_27175"
     CDS             4300..4587
                     /locus_tag="VHX39_27175"
                     /inference="COORDINATES: protein motif:HMM:NF021638.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod-binding protein"
                     /protein_id="HEX3994876.1"
                     /translation="MSVVAAPVMRPSAPVDGAKLWKTARDFEAMALSEFLKPMFDTVD
                     SKNNLFSGGDAEKAWKPMLVDEIGKQIAAHGGLGLAGPIHDAMLRMQEGKS"
     gene            4587..4961
                     /locus_tag="VHX39_27180"
     CDS             4587..4961
                     /locus_tag="VHX39_27180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994877.1"
                     /translation="MPKPLLQVAQRLADILDRENDALRMMDLRRAVGLLPEKAAAIAD
                     LNAAESVGSRPPNPELVSLAGRLDGLAQENRVLLERAIGAQRRVIGIIVRAAASVTVA
                     PNYGGQGQRAHLKGPMALSTRA"
     gene            5078..5806
                     /locus_tag="VHX39_27185"
     CDS             5078..5806
                     /locus_tag="VHX39_27185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RibD family protein"
                     /protein_id="HEX3994878.1"
                     /translation="MDHIVEVATRPVPAAAHDPLFAPLRAPVPDGRSFVLGRIAQSLD
                     GYIATRGGESVWISGPDDLRHTHQLRALCDAVVVGAKTVRADNPRLTTRLVDGPSPVR
                     VVLDPDRRLGSGYRVFHDGPETLLLCAPEVASADCPGSACVLPVPRGPSGLDIPAILA
                     LLRRRGLRRIFVEGGGVTVSRFLAAGALDRLHVTVAPLVMGGGVPAFALPPVERLEEG
                     RRFAWTAHRIGGDVLLDIPLVRTT"
     gene            5838..6788
                     /locus_tag="VHX39_27190"
     CDS             5838..6788
                     /locus_tag="VHX39_27190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase"
                     /protein_id="HEX3994879.1"
                     /translation="MTIARAFWTIAPGQGELRSEILPDAAPGMLPIRALASGVSRGTE
                     ALVFAGHVPSGLYETMRAPLMGGTLPFPVKYGYSVVGEADDGRRVFVLHPHQDRFVAP
                     SAMCVPVPDAIPTHRAVLGANMETALNLCWDAAPLAGERVLVIGAGVVGLLAASLLAR
                     FPATEVTVVDVNPARAELAKRFGCAFATPEAAPANQELIVHASASESGLRLALDRAAF
                     EGRIIEASWYGDAAPTVPLGERFHTHRLRLVATQVGAVASTMRGRRSHAERMAIALTL
                     LDDPAYDALLEGPTLFDDLPEAMPRILAPGGLCHVITYAT"
     gene            complement(6810..>8284)
                     /locus_tag="VHX39_27195"
     CDS             complement(6810..>8284)
                     /locus_tag="VHX39_27195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994880.1"
                     /translation="TGVIDPDAKRLYQVCWISPDNSGNSATAQYFMFVLNVADGSQVV
                     PRVLIEGKSENQDFNAAMRKQRSSLVETNVNGVKTVLGCSGTIFETGAGAAGWCFAFD
                     VASNKVTAMLALTAGEGAGVWMAGQGASADPQGFLYVMTGNGDFDGISQWGESVLKLQ
                     YTPPSGTTAANLKVVDHWTPWTDIARAGKKPPPTLRPSGVSLASESLMQLGSDKMTVA
                     LRSATLKATINDQGRPTVLVFPDMAKGAWSDQDFGSAGPACIFAIGVCIASGKDGIAY
                     PVKTAHMGGTTPADLTNPKTNCAKLAAPPVWLTMSPGPVDACPTDSATLNFFPGGDTA
                     HLHMTPVQFFDPVLNSWVIFAWGENSQLHKWKVSSTGALTYVAEGHEYASDNVREKPP
                     GGMPGGFCSGSSNGADPNSALLYCTIPYGDANAQIVNGRFLVYDPVHLAADGSLKVLW
                     DSQQFNVQFVFNKFDPPVVDGGQIYVPNYNGGVDLYRLVQ"
BASE COUNT         1451 a         2595 c         2606 g         1632 t
ORIGIN      
        1 gcatggcact cagggtcacg ttgcctatcc gcatcgcgcc gataatccgg tgcatcgttt
       61 ggttgcagcg ttgcaggtgt tgaccgcagc cccgatcgat gccggaacgg actggttcga
      121 accttccaca ttgcaactga caagcatcga tgtcggcaac accgcgacca acgtcatccc
      181 gccctctgcg cgtgccgcac tgaatatccg gttcaatgag aaacactccg gcgcctcgtt
      241 gatcgcctgg gttaaggcga caatcgggcg ttacgcggaa cgatttgatg tcgacgcaac
      301 gatcagcggc gagtcgttcg taacgaaacc cggtccgatg gtcgacatcc tgcgccatgc
      361 gatcgtcaag gccaccggag tggagccgaa actcgacacc ggcggtggga cttcggacgc
      421 gcggttcatc gccaattatt gtccggtggc ggaattcggc cttgtcggtg caacgatgca
      481 ccagacggac gagcgcgtcc cggtcgccga gttgcgcgat ctggcgcagg tttaccacga
      541 cgtaatcgca gcgttcctcg catgacggca atgcggcgcc ggacggttcc cccaatcctt
      601 cgcggcgtgg gcctgatcgc gcgagggcgg gccgccggcc tgaactgctt ccgcgacaca
      661 ccacaggcgt tcctgaccag cctcgcaccg ggtctcggca ttatggcagc ctccgttgtc
      721 gagggtctcg ccgaaggcaa cgccgctcgc gccataacgg aaatccccgg cacactctgc
      781 gtgctgctcg caccttcagt gctatcttac gaaatggcgc ggttctgggg ccgtgaggcg
      841 ttctggaacc gctatatcgt tgcgttcaat tggtgtcagt ggctgctgcc ggttattgcc
      901 ttcgtactgc tcggcggact cagtctggcg cagatgggcg gtatcgaccc ggatatcgga
      961 ttgccggccg tggtcgtgtg cctcgccggc tatgctttgt ggttaaactg gtttctcgcc
     1021 cggcatggtc tggcattgag caagtggcgc gccgccggac tggtggccac ggtcaatgcc
     1081 ggcaccatgg cgatcgtatt tgggccaacc ttgatcgcgg cttatttcac atgagcgtca
     1141 tcagtgcggt ggcttccggc gtgcagggcg ccttgatgct ggcgcgcggc cggcccgaag
     1201 gcattgaacg tgtcgaggcc gaccagaccg cggtgatcca ctcgttctgg gccatcccac
     1261 tcagtctgcc tgccgtggtt tgtttgcagc tgctggattg gctcgccacc ggcatcccgg
     1321 ccaatgtgcc ggaggaactg agccgctatc tgatgctgtt cctgattggc tggctggcgt
     1381 tcgtctggct gtcacacggc ctggcgaaga ggttgcatcg gcagccgcta tggccgcggt
     1441 tcattgcgat ctgggcttac tgttcgatca tcgagaacac gctggtcgcc atcggagcgc
     1501 tgccgggtgc gcttggcgca ccgacaatcc tggacgaggc ctgccaactg ataacgatgg
     1561 gatgggcttt gtggctggag tggtacgcga tccgcctcag tttacaggtg ggaccgttga
     1621 tcgccgtcct gttgctgttg gttgatttcg gtattggagc gatcctgaac gcggtggggg
     1681 cgctcgccgg gtagcggtgg gttcagttcg gcgaactgcc atcgcgcccg agcccctctt
     1741 tcctccgcgt cctcggtgat cctgccttac tttataaagg atgtttgaaa cacccgccgg
     1801 cataggtcga tacggcatca ggacgggcgg ccaggaggaa caacctgtca cgccggcgcc
     1861 ttgaaccggt ccgcggttcc ggcgtcgccg caccgtcgcg ccagatcaga cgcccaaccg
     1921 aaacaaccgg ggcaggaacc gccagcgttc tcgaacgcct gcgccggccc gcagcgaacg
     1981 tcaatcgtcg cggtgcacac gctccatccg ctcatgccgt tcctgcgctt cgatcgacat
     2041 ggtcgcaatc gggcgtgcct gaagccggcg gatcccgatt ggctcatcgg tttcctcgca
     2101 gtaaccataa ctgccgtttt cgatccgtcc caaagcctgg tcaatcttgg agatcaactt
     2161 gcgagcgcgg tcgcgggtac gcagttccag cgcacgatcg gtttcgacac tggcgcggtc
     2221 ggtaatgtcc ggctccagga tgccaccctg cgacaggcta agcaaagtgc cgtcggcttc
     2281 cttgagcaat tcgccacgcc aacgcaacag cttctgtctg aaatattcca cctggagagg
     2341 attcatgaat tcctcgtcct cggagggccg gtaatctgga ggcaacgtaa tcaacatcgg
     2401 cgccggtcct gtttattatg tttccgccgc aaacaggtga gcggcggcat ccggccctcg
     2461 cagcacacga cccggatggt cgggcttata gcgatgacgc ctggcgacgc caagaggcat
     2521 cgcgagccat caaacattcg taatgaaacg tcgctttttt gcatcagcca gcgtgctgcc
     2581 ccgaccacac gctcgcccgg cgggcaagtt cgacccggga gcgcaacacc accgcccgca
     2641 cgattgcgcc aagctccgga tcgtccgcga gcggaccatc gccggccagt tcatgcagag
     2701 cattgagcgc cgacgacgga tcttcctcag cgagcatcgc ccgctgcaac cgattcagcg
     2761 cagcgaccat cgctgtccca cgtttgtatg cagctcgatc gcgttccgcc gcctcatcga
     2821 ccgcctgcaa tgccagcata ctttcgagcc cgatccccgc caccgacgcc agccgcccct
     2881 gcttgttcaa tggcgctggc ccgtcatcca ccgtgaattg cccgagtacc gttttcgtgc
     2941 cgtcacgagg caacggcgtc gctgcgccga tatcgctcgc cctcacgcca tcgaccatgc
     3001 tcgctactcc aaccaggtca tccgtgccgg gcggcaaaac ctgcctcgcg gtggattgcc
     3061 ggatgcccgc ggaattccgt gcgttttgcc tggcacgggc gttgcttttt tcaccccgac
     3121 ggatcggccg gcggaatatg acggccaatg gttgcggagt tcttaccggg aaggccatga
     3181 cgtggcgcgg ggtcggcgaa tctttctcag tgtccgggta ttgctggcgg ttttgctggt
     3241 gaccgggcag cccgcgtttg gccagatccg catcaaggac atcgccgacg ttgaaggcgt
     3301 gcggtccaac cagctgatcg gctacggcct gatcgtcggc ctggcgggga ccggcgataa
     3361 gctcgacaac gccgtgttca cccgagaatc cctcatcggc atgctggagc ggttgggcgt
     3421 caacacccgt gaccaatcgg ccaagctgca aaccaaagac ctcgccgccg tgatggtcac
     3481 cgccgagctg cccgctttca cccacaccgg cagccgcatc gacgtcgccg tctccgcact
     3541 gggcgatgcc accaatctga cgggcggaac gttgctggtg acgcctttgc tggccgccga
     3601 cggcgaggtc tatgccgttg cccaaggcgc ggtcgccacc ggagccatcg ccgcacgcgg
     3661 tgcggctgcc tcggtcagcc gtggcgtccc caccgcgggc cagatcgcca atggcgcgat
     3721 tgtggagaag gaggtcgcgt ttcgcctcga caaggccggc agcacgctgc gcctcggcct
     3781 gcgcaatccc gacctgacca cggccctgcg gatttccgcc gtgatcaacc gagcgatcgg
     3841 tccgatcagc aaagccgtcg atccccgcac cgtgctgctg gacctcgcct cccgtaatcc
     3901 gatcgaagta ctgggccgga tcgagaattt gcgcatccaa ccggacaacc ccgcgaccgt
     3961 gatcatcgac gaggccagcg gcacgatcgt catgggcgac gcggtgcgga tcagcacggt
     4021 cgcgatcgcg caggggaatt tgacgatacg ggtgacggag acgccgcagg tttctcagcc
     4081 gggcgcgttc tccaacggca caaccaccac cgtgccgcgc acgcaaatcc aggttgacga
     4141 tgggcgcgac aagaagctcg gcattctgga cagcggcgtt acgttgcgcg acctcgttgc
     4201 ctcgctgaac gcgctgggcg tcgggccgcg cgatctgatt tcaatcctcg agtcaatcaa
     4261 agcggccggc gccttgcagg ccgaccttca ggtgcggtga tgagtgttgt cgcagcacca
     4321 gtgatgcggc cctcggcacc ggtggatgga gcgaaactat ggaaaaccgc acgcgatttt
     4381 gaagccatgg cgttgagcga gtttctgaag ccgatgttcg ataccgtcga cagcaagaac
     4441 aacctgttca gcggcggcga cgccgagaaa gcctggaaac ccatgctggt cgacgaaatc
     4501 ggcaagcaaa tcgccgcgca tggcgggctt gggctcgccg gcccgatcca tgacgcaatg
     4561 cttcgcatgc aagaagggaa atcgtaatgc cgaagccgtt gctccaggtg gcacaacgtc
     4621 tggccgatat actggatcgg gagaatgatg cactccggat gatggatctg cgccgggcag
     4681 tgggcttgct gccggaaaaa gccgcggcaa tcgccgatct gaacgcagct gagagcgttg
     4741 gttccaggcc gcccaacccc gaactcgttt cactggcggg aaggttggat ggtcttgccc
     4801 aggagaacag ggtgttgctg gaacgggcga ttggcgcaca gcggcgggtg atcggaatta
     4861 tcgtgcgtgc agcagcctcg gtcacagtgg caccgaatta tggcgggcag ggccagcgcg
     4921 cgcacctcaa gggccccatg gcattatcga cccgcgcctg atttgtctct tggcgtgcaa
     4981 cccgggaata aatgtcgccg ttatgcgtaa caagaagtga ggggttgcga ccatgtgcaa
     5041 ctaccctcat cccccggcgg catggtaagg gcgcatcatg gatcatattg tggaggtcgc
     5101 tacgcggccg gtacctgctg ccgcgcacga cccgttgttt gcgccattac gcgcgccggt
     5161 gccggacggg cggtcctttg tactgggtcg catcgcccaa tcgctcgacg gctatattgc
     5221 gacgcgtggc ggcgaatcgg tctggatcag tgggccggac gatctgcgtc acacgcacca
     5281 gttgcgcgct ttgtgcgacg ccgtggtggt cggtgcgaaa accgtgcgcg ccgataatcc
     5341 gcggctgacg acacgtttgg tcgatggacc aagcccggtc cgtgtcgtgc tcgatcccga
     5401 ccgccgtctg ggctcgggtt atcgggtgtt tcacgacggt ccagaaacgt tgctgctgtg
     5461 cgcgccggag gtggcgagtg cggactgtcc cggcagtgcg tgcgtgctgc cggttccgcg
     5521 cgggccgtca gggcttgata ttccggcgat cctcgctttg ctgcggcgac gcgggctgcg
     5581 gcggattttt gtcgaaggcg gcggcgtgac ggtgtcgcgc tttctcgccg cgggtgcgct
     5641 ggatcggctg catgtgacgg tggcgccgct ggtgatgggc ggcggcgtgc cggcgtttgc
     5701 tctgccgccg gtggaacggt tggaagaggg gcggcgcttc gcgtggacag ctcaccggat
     5761 cggcggcgac gttctgttgg atatcccgct ggtgcgcacg acgtgaatga cgcaggcgca
     5821 gatctgccga aagacaaatg accatcgccc gagcgttttg gacgattgca ccaggtcagg
     5881 gcgaacttcg ttccgagatt ttgccggacg ccgcaccagg aatgctgcca attcgcgccc
     5941 ttgcctcggg cgtctcacgc ggcaccgaag cgctggtctt cgctggccat gttccttctg
     6001 gtctatacga gacaatgcgg gcaccattga tgggcggaac gcttccgttc cctgtcaaat
     6061 atggttacag cgtcgtcggc gaagctgacg acgggcgccg ggttttcgtc ttgcacccgc
     6121 accaggatcg cttcgttgct ccatccgcca tgtgcgtgcc ggtgcccgac gcgatcccca
     6181 cgcatcgcgc ggtacttggc gcgaacatgg aaacggcgct gaacctgtgt tgggacgcag
     6241 cccctctggc cggagaacgc gtgctggtga tcggcgccgg cgtcgtcggc ctgttggcgg
     6301 cgtcgttgct ggcccgtttc ccggccaccg aagtaacggt cgtggacgtg aatcccgcac
     6361 gggccgaact ggccaagagg ttcggatgcg cctttgcaac gcccgaggcg gcaccggcaa
     6421 accaggaact gatcgtgcat gcgtcagctt cggaatccgg gctacggctg gcgttggacc
     6481 gcgccgcctt cgaggggcgg attatcgaag cgtcgtggta cggcgatgcc gctccgaccg
     6541 taccgctcgg agaacgattt cacacgcacc gcctgcggct ggtcgcgacc caggtcggag
     6601 ccgtggcatc gactatgcgt ggccggcgca gccatgcgga acggatggca attgcactca
     6661 ccttgttgga cgaccccgct tatgacgcgc tgctggaggg gccgacattg ttcgacgacc
     6721 tgccggaggc gatgcctcgg attctggcac ctggcgggtt atgtcatgtc atcacgtatg
     6781 cgacctgaac ggcgacgcag ccggaaaggt cattgcacca atcggtaaag atcgacgccg
     6841 ccattatagt tcggcacata gatctggccg ccgtcgacca ccggcgggtc aaatttgttg
     6901 aacacgaatt ggacgttgaa ttgttgcgag tcccaaagaa ccttcagcga tccgtccgcc
     6961 gcgaggtgca ccgggtcgta aacgaggaag cggccgttaa cgatctgggc gttcgcatcc
     7021 ccgtaaggaa ttgtgcagta aagcagcgcc gaattgggat ccgctccatt gctcgaaccc
     7081 gagcaaaacc cgcccggcat cccgcccggt ggcttctctc gcacgttgtc gctcgcgtat
     7141 tcgtgaccct cggcgacata agtcaacgcg ccagtcgagc tgactttcca tttatgcagc
     7201 tgagaattct cgccccatgc gaagatcacc cacgagttca gcacggggtc aaagaactgc
     7261 accggggtca tatggagatg cgccgtatcg cctcctggaa agaagttcaa cgttgcggaa
     7321 tcggtcgggc aggcgtcaac cggtcctggg ctcatggtca gccagaccgg cggtgctgca
     7381 agctttgcgc aattcgtttt cgggtttgtc agatcggccg gcgtcgttcc gcccatatgc
     7441 gcggtcttta ccggataggc gatgccgtcc ttgccgctgg caatgcaaac gccgatagcg
     7501 aagatacaag cgggacccgc cgatccaaag tcctggtccg accatgcgcc ctttgccatg
     7561 tcgggaaaca cgagaactgt tggcctgcct tgatcattga tcgtcgcctt cagcgtcgcg
     7621 ctgcgcaatg cgacggtcat cttgtcgctg cccagttgca tcagactttc ggacgcgagg
     7681 ctgacgccgg atgggcgcag ggtcggcggc ggtttcttcc cggctctggc gatgtcggtc
     7741 caaggcgtcc aatgatcgac aaccttcaga ttggccgccg tggttcccga cggtggcgtg
     7801 tattgcagct tgaggaccga ctcgccccat tggctgatac cgtcgaaatc gccgtttccg
     7861 gtcatgacgt acaggaaacc ttgcggatct gccgaagcgc cttgtccggc catccataca
     7921 ccggcgccct cgccggccgt cagggccagc atcgcggtca ccttgttgct cgccacgtcg
     7981 aaggcgaagc accaaccggc tgcgcccgcc ccggtctcga agatcgtgcc cgagcacccc
     8041 agcaccgtct tgacgccgtt tacgttggtc tccaccagtg acgaacgctg tttgcgcatc
     8101 gctgcgttga agtcctgatt ttcgctcttt ccttcgatca gaacacgggg aacgacctgg
     8161 ctgccatccg caacgttcaa aacgaacatg aagtactggg cggttgccga attgccgcta
     8221 ttgtccggcg agatccagca gacctgataa agtcgcttcg catcagggtc gattaccccc
     8281 gtgg
//
LOCUS       DATAVD010001418         2960 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2927405, whole genome shotgun sequence.
ACCESSION   DATAVD010001418 DATAVD010000000
VERSION     DATAVD010001418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2960
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2927405"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            16..498
                     /locus_tag="VHX39_27200"
     CDS             16..498
                     /locus_tag="VHX39_27200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994881.1"
                     /translation="MTAFTDGCPGLRHILAGAGVTEPPMLDWFHIGMRLQHLNQIADG
                     LAAGDPAHAAVKTTIITEVDRLHWRIWNGKAKNARKSIDRIRRVMHHFRSEPDTRKSI
                     APSRKLWTALRELDSYLASQSARLVNYAERHRAGLRVGTSITEGTANFLVEGIASVVR
                     "
     gene            923..1645
                     /locus_tag="VHX39_27205"
     CDS             923..1645
                     /locus_tag="VHX39_27205"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX3994882.1"
                     /translation="MRADTIEYDADGLHMVSHLYYDETKQGRRPGVLVFPEAFGLGDH
                     AKGRAERIAGLGYVALACDLHGDGRTYTQLEEVMPLLGPLMADPSRTRARAGGGLKAL
                     RARSDVASDKIASIGYCFGGTMSLELARAGEDIAGVVGFHSGLGTAKPNETKSIRPKI
                     LICIGADDPLIPPDLRLTFAEEMTRAGADWQIHLYGGVTHSFTNPEADKVGKPEMLRY
                     DRNADARSWASMCTFFGEIFGV"
     gene            complement(1856..2716)
                     /locus_tag="VHX39_27210"
     CDS             complement(1856..2716)
                     /locus_tag="VHX39_27210"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX3994883.1"
                     /translation="MAKSMRYQGIPTELSLEEFGQFVLPHLTVGSRGPAPKLSLHAMF
                     NYILKLLYLGCQWKELPIAKDSDGRPEIHYTRVYGAFRRWQAGGCFDIIFTAAVLRLR
                     QANLLDVTIIHGDGTTTAAKKGGDNIGFNGHKQIKGDKVVAFCDRNCNVIAPFVAAPG
                     NHNESPLLREALPIVARVARAVGMDLRGTIVSLDGVYDCRQNRKAIFNRGMVPNINAN
                     PRGRKFTKRGRKPLFNADIFRERFDTIERVFGWEDKFRRLLLRFERLSRLHYAFKTLA
                     YTMINLRHFC"
     gene            complement(2834..2960)
                     /locus_tag="VHX39_27215"
                     /pseudo
     CDS             complement(2834..2960)
                     /locus_tag="VHX39_27215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014327616.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
BASE COUNT          624 a          869 c          893 g          574 t
ORIGIN      
        1 accggggaca ccgtgttgac ggccttcacc gatggttgtc cagggctccg gcacattctc
       61 gccggcgccg gtgtcactga accaccgatg cttgactggt ttcatatcgg aatgaggctt
      121 caacacctca accaaatcgc ggatggactg gcggctggtg atcccgcgca cgccgcggtg
      181 aagaccacga ttatcacgga ggtcgaccgc ttgcactggc ggatctggaa tgggaaagcc
      241 aaaaacgcgc gcaagagcat cgatcgcatc cgcagggtca tgcatcattt ccggagtgag
      301 ccggataccc ggaaatccat cgcgccatcg cgaaagctat ggacggcatt gcgggagctg
      361 gatagctatt tggccagcca gagcgcccgg ctggtaaatt acgccgaacg ccaccgcgcg
      421 ggcttgcgtg ttggaacctc gatcaccgaa ggaacggcga atttcctagt ggagggcata
      481 gcgtcggttg tcagatagac aacgctacgg gcgaacattc tgggaaccag ctgtgtcccc
      541 tgaagggggc gaccatttat ggacggtcgg caattgcggg acgcattctg tggacggaaa
      601 ttcggcacgc cgagcgcacc cggcgcgtgt gtccacagaa cgaacagttt ggggacgatc
      661 aagcggacgg ctgcatcgtt cgctttcgtt ctaacttagc gttgtttatc taacaaccga
      721 cgctatgccc tctcgctgcc tgaattgcgg aatcccaagc tgagcgactt gcctccaatt
      781 cggtggtggc ggcgggatgg gcgcgccgat ccgtggaact ggtatgaccc ttcaatgtcg
      841 ggatatactc aaagcgcatc cgggcccggc gttgagcagc tcgggtcgga ctattcgcaa
      901 atctgcaacg acggagacgg gtatgcgagc cgacaccatc gaatatgatg cagacgggct
      961 gcacatggtc agccatctgt actacgacga aactaagcag ggccggcgtc ccggcgtgct
     1021 ggtgtttccc gaggcgttcg gcctcggcga ccatgccaag gggcgcgccg agcggattgc
     1081 agggctcggc tatgtggcgc tcgcctgcga cctgcatggc gacggcagga cctacaccca
     1141 actcgaggag gtgatgccgc tgctcggccc gctaatggcc gatccttctc gcacccgcgc
     1201 ccgcgccggc ggtgggctca aggcgctgcg cgccaggtcg gacgttgcat ccgacaagat
     1261 cgcctcgatc ggctactgtt tcggcggcac gatgtcgctg gaactcgcgc gcgccggcga
     1321 ggacatagcg ggcgtggtgg gctttcacag cggcctgggt accgccaaac ccaacgagac
     1381 caagagcatc aggccgaaaa tcctgatctg cataggcgcg gacgacccgc tgatcccgcc
     1441 cgatctacgc ctcaccttcg cggaggaaat gacccgcgcc ggcgccgact ggcagatcca
     1501 tttgtacggc ggcgtcacgc acagcttcac caaccccgag gcagacaaag tcggcaagcc
     1561 ggaaatgctg cgctacgatc gcaacgccga cgcgcgctcc tgggcgtcga tgtgcacgtt
     1621 tttcggggag attttcgggg tctgatcacg ccggtcgcaa cctactggtt gcgggtttcc
     1681 gacgtcgtcg ggctgcatga gcacgagtga ccgggcgaag accttggaat gccgcttcga
     1741 cacgacgatt ttgtaatgcc atgggtcgga aacgggaact ttatcattcc agagccgcgc
     1801 aaaatcaccg cgcgggcggc gccgtgacga ttcggcatca aacgcatggt tgacgctagc
     1861 agaagtgacg taggttgatc atcgtataag ccagcgtctt aaacgcataa tgtagccgac
     1921 tgaggcgctc gaaccggagc aacaagcggc ggaacttatc ctcccagcca aacacgcgct
     1981 caatggtatc gaagcgttcc ctgaatatgt cagcattgaa caacggcttc ctgccacgtt
     2041 tggtgaattt cctacctctg ggattggcat tgatattggg caccatgcca cggttgaaga
     2101 tcgccttccg attctgtctg caatcgtaaa ccccatccag gcttacaatt gtaccacgca
     2161 ggtccatgcc aacggcacgg gctactcgtg ctacgatcgg caaggcctcg cgcaggagcg
     2221 gcgattcatt gtggttgccg ggagccgcga caaacggcgc gatgacattg caattccggt
     2281 cgcagaaggc gaccacctta tcgcccttga tttgcttgtg tccgttgaag ccgatgttgt
     2341 cacctccttt cttcgccgcc gtcgtcgtgc catcgccatg gatgatggtc acgtcgagaa
     2401 ggttggcctg acgaagcctc agtaccgcag ccgtgaaaat gatatcaaaa cagccgccgg
     2461 cctgccaccg tcgaaaggcg ccataaacac gggtatagtg gatctcaggg cgtccgtcgg
     2521 agtcctttgc aatcggcaat tctttccatt gacatcctag gtacagcaat ttcaggatgt
     2581 aattgaacat ggcatgcaaa gacagcttcg gcgccggacc acggcttccc acagtcaggt
     2641 gtggcaagac aaattgcccg aactcctcca ggctcagttc cgtcggaatg ccctggtacc
     2701 gcatactttt cgccatttcg acccccaatg aacagggagc ctgtagcgaa ccacgcggca
     2761 gcgccaaaac cccgcaatgt cagaagctta ctggtgggtc cgatctgtgt ggaaacccgc
     2821 aaccagtagt gtgtgaggcc tcaatcagca gggtgcgggc gtgaatatca ccgctcttgg
     2881 tgatggcgcc gatgcggcgc ttggggccgg aggaatgtgc cgatggtacc aaaccgaggt
     2941 aggccatgaa gtcgggtgct
//
LOCUS       DATAVD010001419         3001 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3484384, whole genome shotgun sequence.
ACCESSION   DATAVD010001419 DATAVD010000000
VERSION     DATAVD010001419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3001
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3484384"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            198..860
                     /locus_tag="VHX39_27220"
     CDS             198..860
                     /locus_tag="VHX39_27220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014189153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3994884.1"
                     /translation="MSQTKNPPRPPPANAALVLVVDDDPSMREALGALFRSVGLATEF
                     FISPAELLKRDPPDVESCLVLDVRLPGVSGLDFHTRLATLWREIPVIFMTGYADVPMS
                     VRAMKAGAVDFLPKPFRDQDMLDAVAAALARDRARRITLGEVAILHARFRSLTARERE
                     VMQHVTSGLMNKQIAAEVGLTEVTVKVHRGNVMKKMAARSVPDLVRMATSLAAHPIAP
                     GS"
     gene            960..1346
                     /locus_tag="VHX39_27225"
     CDS             960..1346
                     /locus_tag="VHX39_27225"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3994885.1"
                     /translation="MPNVPLVSVVDDDESVRASVGSLVRSIGRTALTFASAEAFLGSA
                     EAEATGCLIADIQMPGMNGIELQEALVTQGRRLPIIFITAWPEDRIRQQVLASGALCM
                     LSKPCDSDALVNYIETALSPRAPNDV"
     gene            complement(1473..2354)
                     /gene="rsmI"
                     /locus_tag="VHX39_27230"
     CDS             complement(1473..2354)
                     /gene="rsmI"
                     /locus_tag="VHX39_27230"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEX3994886.1"
                     /translation="MQEGPHAHPAGLVLVSTPIGNLGDVSTRARDALKHSDLILCEDT
                     RHSAHLLTALGIATRTAPLHEHNEDSRIAPTLALLRAGKRIALISDAGTPLVSDPGFR
                     LVRAAIAEGLPVTAIPGPNAAVTALILSGLPPLPFLFLGFSPSRQAARRTAFGALRAA
                     ERAGLTATLIWHEAPHRLAETLADMADAFGTRAAAVARELTKHFEEVRRGTLAALAEH
                     YAAHAARGEITILLGPPEDNDTEDLDGTLRAALRDHSVREAAALVTAATGLPRKLVYA
                     RALTLSKQAAGDSDSET"
     gene            2405..>3001
                     /locus_tag="VHX39_27235"
     CDS             2405..>3001
                     /locus_tag="VHX39_27235"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HEX3994887.1"
                     /translation="MLRRAFVLLSGTLGLAACGSSDSDKPTVINQPPGKASGNGPGAN
                     PIAAGPVAILLPLTGKMADIGKPMLNAAQLALTVPGSPDLMVKDTGGTPDGAAKAAQE
                     AIEGGARMILGPVTSAETAQVAPIARPAGVPVLAFTNDHAQAQPGVWVLGVTPGQQVR
                     RLLGAVQQAGKGQVAGLLPDTDFGKAMADELTRDASIMG"
BASE COUNT          526 a          926 c         1017 g          532 t
ORIGIN      
        1 cctcgaaagg gctcggactt accggacaga tcgtgtgcta cctaaaccgg acatatcgtg
       61 tgctactgac acaaaccatg gatggacttg cgatacgcgc cggtctgccg gaagatgcag
      121 cccagtggca acaaaaggtg agagcgtgac tgctccggcc gcgttccgtc agccagctgc
      181 gagagcgggg tgaacggttg agccagacca aaaatccccc acggccgccg cctgcgaacg
      241 cagcgctggt gctcgtggtc gacgacgatc cgtcgatgcg cgaggcgctt ggggcattgt
      301 ttcgctctgt cggtctcgcc accgagtttt tcatctcacc ggccgagctc ctgaagcgcg
      361 atccgccgga cgtggagagt tgcctcgtgc tcgacgttcg cctgcccggc gtcagcggtc
      421 tcgattttca cacaaggctg gccacgctct ggcgcgagat cccggtcatt ttcatgaccg
      481 gatatgccga tgtccccatg tcggttcgtg ccatgaaggc cggcgcggtc gatttcctgc
      541 ccaagccgtt ccgtgatcag gacatgctcg atgcggtggc cgctgcactc gcgcgagatc
      601 gggcgcgccg gatcactttg ggcgaggtcg ccattctgca cgcaaggttt cggtcgctga
      661 ccgcccggga acgcgaagtc atgcagcatg tcaccagcgg cctgatgaac aagcagatcg
      721 ccgccgaggt cgggctgacc gaggtcacgg tcaaggtgca ccgcggcaac gtcatgaaga
      781 agatggcagc gcggtcggtg cccgatctgg ttcgaatggc cacatcgctt gcagcacatc
      841 caatagcgcc gggatcatag actacagtat aattgccgaa attgggcgaa tatgcgacca
      901 ggatgacgga cgcgcggggt ttcggcgctt cctcgccgag taacccaagg tgcctttcat
      961 tgcccaatgt tcccctggtt tcggtcgtcg atgacgacga gtcggtgcgc gcttcggttg
     1021 gatcgctggt gcggtcgatc ggccggacgg cactgacctt cgcctcggcc gaggcgttcc
     1081 ttggttcggc agaagcggaa gccaccggtt gcctcatcgc cgacatccag atgccgggaa
     1141 tgaatgggat cgaattgcag gaagcgctcg tcacgcaagg acgccgtctg ccgatcattt
     1201 tcatcacggc ctggccggaa gaccggatcc ggcagcaggt gctcgcgtca ggcgcgcttt
     1261 gcatgctcag caagccgtgc gacagcgatg cgctggtgaa ttacattgaa acggcgttat
     1321 cgccgcgggc cccgaacgac gtgtgaggcg gcttagtacc cacaatcagt ggaccgtgag
     1381 tcgtgatgcc cctttcgtca tccccggaac aagtcccggg atgacgattg agcgcgtcgc
     1441 gtttcaacga ttccgggtaa taggttcggg ggtcaggttt cgctgtcgct atcgcctgcc
     1501 gcttgcttcg acaacgtcag cgcccgcgca taaaccagct tgcgcggcag cccggttgcc
     1561 gcagtgacca gcgccgcggc ttcccgcacg ctgtggtccc gcagagcggc ccgcagggtg
     1621 ccgtccagat cctcggtatc attgtcctcg ggcgggccga gcaggatcgt gatctccccc
     1681 cgtgcggcat gcgctgcgta gtgctcggca agcgccgcca gtgtgccgcg gcgcacttcc
     1741 tcgaaatgct tggtcagttc gcgggccacg gcggcggcgc gggtgccgaa cgcatccgcc
     1801 atgtcggcca gggtttcggc cagccggtgc ggcgcttcgt gccagatcag cgttgcggtc
     1861 aggccagctc gttcggccgc gcgtaaggcg ccgaaggcgg tgcggcgggc agcctggcgg
     1921 gacggggaaa aacccagaaa caggaagggc aggggcggca ggccggagag tatcaatgcg
     1981 gtcaccgcgg cattcgggcc ggggatggcg gtaaccggca aaccctcggc gatcgctgcg
     2041 cgtacgaggc ggaagccagg atcggagacc aacggcgtgc cggcgtcgga aatcagcgcg
     2101 atccgcttcc cggcccgcag cagcgcaagg gtcggggcga tgcgcgaatc ctcattgtgc
     2161 tcgtgcagcg gtgcggtccg ggtcgcaatg ccgagagcgg tcaacaaatg ggcagaatgt
     2221 cttgtgtcct cgcacagaat cagatcgctg tgctttaagg cgtcgcgcgc gcgggtcgat
     2281 acgtcaccga ggttgccgat tggcgtggaa accagcacaa gaccagcggg gtgggcgtgc
     2341 ggcccctctt gcatcccgtc gggcgaatcc tcggcgggca aatcatcgtc gggaggcgtt
     2401 gggcatgctg cgtcgggcat tcgttctcct cagtggcacg cttggcctgg cggcctgcgg
     2461 atcatcggac agtgacaaac ccactgtcat caaccaaccc ccgggcaagg cttcgggcaa
     2521 cgggccgggg gccaatccga ttgctgcggg tccggttgcc attctactcc cgctcaccgg
     2581 caaaatggcg gatatcggca agccgatgct taacgcggcg caattggcgc tgacggttcc
     2641 gggttcgccc gacctgatgg tcaaagatac cggcggcacg ccggacgggg cggccaaggc
     2701 ggcacaggaa gcgatcgagg gcggcgccag gatgatcctc ggtccggtta cctcggccga
     2761 aacggcgcag gtggcgccga ttgcgcggcc cgcgggagta ccagtgctcg ccttcacgaa
     2821 tgaccacgcc caggcacagc ccggcgtatg ggtgttgggg gttacgcccg gccagcaggt
     2881 ccgccgcctg ctgggcgcgg ttcagcaagc cggcaagggc caggtcgccg gcctgttgcc
     2941 ggatactgat ttcggtaaag caatggccga cgagctgacc cgggacgctt cgattatggg
     3001 c
//
LOCUS       DATAVD010001420         2186 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_139605, whole genome shotgun sequence.
ACCESSION   DATAVD010001420 DATAVD010000000
VERSION     DATAVD010001420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2186
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139605"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..1082)
                     /locus_tag="VHX39_27240"
     CDS             complement(93..1082)
                     /locus_tag="VHX39_27240"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: protein motif:HMM:NF005089.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HEX3994888.1"
                     /translation="MRICVFGAGSVGGYLAAYLERGGAEVSVVARGAHLAAIRANGLT
                     VETPDERLTVRVAASDNPAELGRQDLVLVTVKAPALPDVAVTIAPLLGSQTTVAFVMN
                     GIPWWYFHAHGGPLNGRQMHSLDPDGALWRTVSPERAIGAVFWPACSVPSPGVVRLLT
                     GAGGGTVFGEPSNTLTPRLQALADAFRAAGLPVTLTQDIRALIWRKLAFNLSAGPMCV
                     LTETPVLDTHTEPALIDCSGAMLTEAVAVAAGMGITLNMNIAAIAETNKRLAHRPSIL
                     QDLTSGRPMEIEALYGVPLELARLAGVPTPMLDVLVGLIKVKARARGLYHPAS"
     gene            1334..1948
                     /locus_tag="VHX39_27245"
     CDS             1334..1948
                     /locus_tag="VHX39_27245"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEX3994889.1"
                     /translation="MSERAVTRMSTEEFLDWGLHQEPRHQLVDGVAIALAGTKQQHDQ
                     IVANVHGILYNQMRGKSMRGKKWRYFTVDLGVRIPAGNIRCPDAGVDRGVFDSESMTA
                     GAPYLVLEVLSPSVRDFDMFGKLEEYKTIPTLSHIIIVDPDAPQVYHWSRCLDEVWHY
                     VLLDGPHAVIQLPEVDGSIDLGSLYEGLTFRAQPRLVHTGVHSG"
BASE COUNT          418 a          685 c          678 g          405 t
ORIGIN      
        1 gtgggccgcc cggatgggcc aacccgatgg ttaagccgga accccgacag ggcattccga
       61 acgttccaga ggtagtcacg caaatgccgt gttcaagagg ccggatggta tagtcctctt
      121 gcgcgcgcct ttacttttat cagcccgacc agaacatcga gcatcggtgt cggcacgccg
      181 gccagccgag cgagctcgag cggcacacca tagagcgcct cgatctccat cggccgaccc
      241 gatgtcagat cctgcaaaat acttggccgg tgcgcgagcc gcttattggt ttccgcgatg
      301 gcggcaatgt tcatgttcag tgtgatgccc atgccagccg ccaccgccac cgcctcggtc
      361 agcatagcgc cggagcagtc gatcagggcc ggttcagtgt gggtatccag aaccggcgtc
      421 tcggtcagca cgcacatcgg gccggcgctg aggttgaaag cgagcttgcg ccagatcagc
      481 gcgcgaatgt cctgagttag cgtgaccggc aatccggcag ctcgaaaggc gtcagcgagc
      541 gcctgtaacc gcggtgtcaa agtattcgac ggctcaccga agacggtacc cccgccggca
      601 ccggtcagca gccggaccac gccgggggag ggcaccgagc aagctggcca gaatactgca
      661 ccaatcgccc tctccggact gactgtgcgc cacaacgccc catcgggatc gagcgaatgc
      721 atttgcctgc cgttcagcgg accgccatgg gcgtggaaat accaccacgg aattccgttc
      781 attacgaagg ccacggtcgt ctgcgagccc agaagcggtg cgatcgtcac agcgacgtct
      841 ggcaacgcgg gagccttcac tgtgaccagg acaaggtcct gccggccgag ttctgcggga
      901 ttatcgctgg cggcgacgcg gacggtcagc cgctcgtccg gtgtctcgac ggtcaggccg
      961 ttggcgcgga ttgcggccag atgagcaccg cgcgccacga ccgaaacctc ggcaccgcca
     1021 cgctccagat aggccgcgag gtagccgccc accgagccgg caccgaatac gcaaattcgc
     1081 atgagttgac cccgtcgact gcccgaaacc tggcaataca tgaatttgtc ggatttgctc
     1141 tacccggaac ggagacattg ccgcctacga tcgtcggtgg ctccggaatt ggctgatttc
     1201 ctgccccgta gggcacctgg caggcccacg ccggccgagt tgatcacctg tcctcctgaa
     1261 aatattcaca gctggatcac gatgatccga cggctgccat gccatattgg gtctttcgcg
     1321 aagaggagcc ggtatgagcg aacgagcggt aacccggatg tcgaccgaag agttcctgga
     1381 ctggggcttg caccaggaac ctcgccatca actggtcgat ggcgtcgcga tcgccttggc
     1441 tggcaccaag cagcagcatg accagatcgt cgcgaacgtc cacgggattt tgtacaacca
     1501 gatgcgtggc aaatcgatgc gcggcaagaa atggcggtat tttaccgtcg atctcggggt
     1561 ccgcattccg gcaggcaata ttcgctgtcc cgatgccggc gtggaccgcg gcgtgttcga
     1621 cagtgagtcg atgaccgccg gtgcgcctta cctcgtgctg gaggtgcttt cgccgtcggt
     1681 tcgcgatttc gacatgttcg gcaagctgga agaatataag acgatcccga ccctctcaca
     1741 cattatcatt gtcgatcccg atgcgcctca ggtttaccac tggtcgcgct gcctggatga
     1801 ggtttggcac tacgtgttgc tggacgggcc gcatgcggtc atccagttgc ctgaggtcga
     1861 cggttcgatc gatctcggca gtctttacga gggactaacg tttcgggcgc agccgcggtt
     1921 ggtgcatacc ggggtgcatt cggggtaaac ggatcaaacc tccgaaacgc ggcaatccgt
     1981 ggagccgggc gtgcgagtgc cgcgtgttgc cgcgcacgcc ggccaggtgg ctcacgcgct
     2041 tttgcaatgc gcgggaccgt cggtaactgc ccgtctctct tgaccggcgt agctgacggg
     2101 tgagtaatct cccacgaccg tcgcccaacc ctgccgcgac gcgtatccgg gagccgcgca
     2161 gatgacgacc gtccatcccc aggttc
//
LOCUS       DATAVD010001421         2253 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1434899, whole genome shotgun sequence.
ACCESSION   DATAVD010001421 DATAVD010000000
VERSION     DATAVD010001421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1434899"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..842)
                     /locus_tag="VHX39_27250"
     CDS             complement(<1..842)
                     /locus_tag="VHX39_27250"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3994890.1"
                     /translation="MADVRIVATGLGFPEGPVAMQDGAVILTEIRNRRVSRIMPDGAV
                     STLSDTGGGPNGLALGPDGALYGCNNGGSRYVAGSSMGQGPLEGYAGGWIERIDVQTG
                     DARKLYTEVGGNKLSAPNDLVFDQHGGFYFTDLGKRYARHRDHGGLYYALPDGTKVQE
                     IAYPILSPNGCGLSPDNRIVYVADTESARLWAFDIVSPGVVKHDTTHAPHGGRLVGSI
                     AGHARFDSLAVTASGNICVATLNTGHITVFSPQGAVLEQVKMPDTYPTNICFGGADLR
                     TAYIT"
     gene            1002..1958
                     /locus_tag="VHX39_27255"
     CDS             1002..1958
                     /locus_tag="VHX39_27255"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-alpha-hydroxyglycine alpha-amidating
                     lyase family protein"
                     /protein_id="HEX3994891.1"
                     /translation="MATVGNGEYTYEPVENWAKLPPGWSFKEIGSVGVDRNDNVYVFN
                     RGEHPMIVFDRNGNFLRSWGEGLFPRAHGVFMAPDDTIWLTDDGDHTVRQCTLEGKVL
                     LTLGIPGKPAPYMSGEPFHRCTHTAMSPQGDLYVSDGYGNSRVHKYTPAGKLLLSWGG
                     PGTDPGEFNIAHNITCDGDGWVYVADRENHRVQVFDGNGRYETQWNNLHRPCGLFMPP
                     GKCPICYIGELGAVQPVSRNVPNLGPRVTIVDNTGKRIARLGGMGPGVGPTEFLAPHG
                     LTVDSRGDLYVGEVSWTNWPQLWPDQPRPDNLRSLHKFRKVG"
     gene            complement(1959..>2253)
                     /locus_tag="VHX39_27260"
     CDS             complement(1959..>2253)
                     /locus_tag="VHX39_27260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994892.1"
                     /translation="WTKSPRLLNLAGDLLLRAAVQAANSTGSPHVSSQEWPSRTLDFR
                     AASEKAISLFAAVLTLTPNAEDEHAARRALATIQHLKAQVAARAEDADGQPDC"
BASE COUNT          402 a          706 c          732 g          413 t
ORIGIN      
        1 gtgatatagg cggttcgcag atcagcgcca ccgaagcaga tattggtcgg atacgtatcc
       61 ggcattttca cctgctccag gaccgcaccc tgcggcgaga acacggtaat gtggccggtg
      121 ttcagcgtgg caacgcagat attgccgctg gcggtcaccg ccaggctgtc gaagcgggca
      181 tggccggcga tgctgcccac cagacggccg ccatgcgggg cgtgggtcgt gtcgtgcttt
      241 acgaccccag gcgaaacgat gtcgaacgcc caaagccggg cgctttcagt atcggcgacg
      301 taaacaatgc ggttgtccgg cgacagcccg cagccgttcg ggctgagaat cggataggcg
      361 atctcctgca ctttcgtccc gtccggcagc gcgtagtaca gcccgccatg gtcacgatgc
      421 cgggcgtagc gtttgccgag atcggtgaaa tagaaaccgc catgctgatc gaacaccagg
      481 tcgttcggcg ctgacagctt gttgccgccg acctcggtgt acagcttgcg tgcatcgccg
      541 gtctgcacat cgatccgttc gatccagccg ccggcatagc cttccagcgg cccctgcccc
      601 atcgaggaac ccgccacata gcggctgccg ccattgttgc agccgtacag cgcaccatcc
      661 gggccgagcg ccaatccgtt cgggccgcca ccggtgtcgg acagcgtgct caccgcgccg
      721 tccggcatga tgcgcgacac gcgccggttg cgtatctcgg tcaggatcac cgcaccgtcc
      781 tgcatcgcca cgggtccttc gggaaaaccg aggccggtcg ccacgatccg cacatccgcc
      841 attgccgttt cctccaggct tgattgccca catcccaggt ctatcgtgtg ccctcggcag
      901 cacacgtcaa ggtcgcttgt gcagcgggat ggacccgcgg gtttccacac gaccggccgc
      961 gtgacaagct gccgcggatg tgaaggggag agagaagcgc catggcaaca gtgggcaacg
     1021 gcgaatacac ctacgagcct gtcgagaact gggcgaagtt gccgccaggc tggtcgttca
     1081 aggagatcgg ctcggttggt gtcgatcgca acgacaatgt ctatgtgttc aatcggggcg
     1141 agcacccgat gatcgtgttc gatcgcaacg gcaatttcct gcgttcctgg ggcgagggcc
     1201 ttttcccccg tgcgcatggc gtgttcatgg cgccggatga cacgatctgg ctgaccgatg
     1261 acggcgacca cacggtgcgg cagtgcacgt tggaggggaa ggtgctgctg accctgggca
     1321 tccccggcaa gccggcaccg tatatgagcg gcgagccgtt ccatcgctgc acccacaccg
     1381 cgatgtcacc gcagggcgat ctgtatgtgt ccgacggcta tggcaattca cgcgtgcaca
     1441 aatacacgcc cgccggcaag ttgctgttgt cgtggggcgg tccaggcacc gatccgggcg
     1501 agttcaacat cgcgcataac atcacctgcg acggcgatgg ctgggtgtat gtggcggatc
     1561 gcgagaacca ccgcgtgcag gtgttcgacg gcaacgggcg ctatgaaacg cagtggaaca
     1621 acctgcatcg tccgtgcggc ttgttcatgc cgccgggcaa atgcccgatc tgctatatcg
     1681 gcgagttggg cgcggtgcag ccggtcagcc ggaacgtgcc caaccttggg ccgcgcgtca
     1741 cgatcgtgga caacaccggc aagcgcatcg cgcgactggg cgggatggga ccgggcgttg
     1801 ggccgacgga gttcctcgca ccacatgggc tgacggtcga ttcacgcggc gatctttacg
     1861 tcggcgaggt gtcctggacc aattggccgc agctctggcc ggaccagccg cgacccgaca
     1921 acctgcgctc gctgcacaag ttccggaagg tggggtgatc agcagtcggg ttggccgtca
     1981 gcgtcttccg ccctggcggc cacctgcgcc ttcaagtgtt gaatggtggc aagtgcgcgc
     2041 cgcgcagcgt gttcatcttc ggcatttggc gtcaacgtca gcaccgcagc aaacaggctg
     2101 attgcttttt ccgaagccgc tcggaagtcc agtgtgcgtg agggccattc ctgagaactg
     2161 acatgcgggc tgccagtcga atttgcagct tgcacggctg cccgcagaag gaggtcgccg
     2221 gcgaggttca gcagcctggg gcttttggtc cac
//
LOCUS       DATAVD010001422         3405 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1809377, whole genome shotgun sequence.
ACCESSION   DATAVD010001422 DATAVD010000000
VERSION     DATAVD010001422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3405
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1809377"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..848)
                     /locus_tag="VHX39_27265"
     CDS             complement(<1..848)
                     /locus_tag="VHX39_27265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994893.1"
                     /translation="MHNDTRGLPVTAASADAVQAFDHAIDAYLSYRFDIMTRMETLFA
                     ADPECGMAHILKGYLLLLGYKSQLVPAARAAAQTAGPLLRHATQREQAHLHALTVWAD
                     GDPDKASVIWEDILWDHPHDILAFRLHHFINFWFGRPDVMLATVLSVEKRWSEAIPGF
                     NSILGCRCFAHEESGYYLEAETAGREAIRRDPTDLWAAHGVAHVLEMTGRRREGVAWV
                     DALENGWSAANNLKHHLWWHQAMFYLELGDMSRVLTLYDSRFRNPESALVKAVPDLYI
                     DVQNAAS"
     gene            962..2260
                     /locus_tag="VHX39_27270"
     CDS             962..2260
                     /locus_tag="VHX39_27270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3994894.1"
                     /translation="MLALLRDLTARERRTMIACFGGWSLDSLDVTIYTFVIPSLLALW
                     HISTAEAGELATITLLVSAFGGWIAGALADRFGRVRVLQVTIVWYALFTFLCGFAQDF
                     NQLFVLRAMQGFGFGGEWAAGAVLMGEVIRDQYRGRAVGLVQTGYSIGWGTAALLFTL
                     FFAVLPEAMAWRAMFWIGLAPALLVFWIRRYVEEPDLQARRTEPVGWSHLFAALKPPH
                     LAITWRVAMMVTGAQGGGYALGTFLPTFLKTQRHLTSVGTGSYLLVLILGAFCGFIAG
                     AYLSDAIGRRGTFLLSAIGSLIVMLIYMLAPLSNDVILPVGFVLGFINLMMFSPMGSF
                     MTELYPTSVRGVAQGFCYNVGRGIGAIFPVMVGFLADRYGLANAIVVFSGFGFGLMII
                     ALFLLPETKGRSLASLEADEAFPQSDAAGNLPVPPAAGAR"
     gene            complement(2264..2953)
                     /locus_tag="VHX39_27275"
     CDS             complement(2264..2953)
                     /locus_tag="VHX39_27275"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEX3994895.1"
                     /translation="MELIDLSRELFHRTQVHPSHPPVVISVWGDHSEKKVAGDTVFTS
                     MSLSLNLGDHSGTHVDAPVHFDPRPGAASIDEMPLEKFYTSAICLDLSHVPLGHAITV
                     PEMEDALAKSRQDIRPGDTVLIYMATNERLLGKPGYQHDFPGLALASVHWLADRGIGM
                     FGVEAISPAPEGELNFQAHMACAERGITHMECLANLHKLVGRGRFRFIGFPLKIRGGT
                     ASPIRAVALFE"
     gene            3056..>3405
                     /locus_tag="VHX39_27280"
     CDS             3056..>3405
                     /locus_tag="VHX39_27280"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3994896.1"
                     /translation="METLSDVLEDTTSFEKVAGGFIFTEGPLWHPDGFFYFVDVRGSG
                     LFRVTLGQPHEKVRETNGGNGLTFDLQGRLINCEGDARRVTRTELDGTVGTLIDRFEG
                     KRLNRPNDVICHSNG"
BASE COUNT          627 a         1009 c         1027 g          742 t
ORIGIN      
        1 gaagcggcgt tctgcacatc gatatacaag tccggcacgg ctttgaccaa agccgactca
       61 ggattgcgaa atcggctgtc gtacaacgtc agaacccgcg acatatcgcc gagctccagg
      121 taaaacatgg cctgatgcca ccatagatgg tgcttcagat tgttcgccgc gctccatcca
      181 ttctccagcg catcgaccca cgcgacacct tcccgccgcc gtccggtcat ttccagcaca
      241 tgagcgacac catgcgcagc ccagagatca gtcgggtcgc ggcggattgc ttcgcggccg
      301 gccgtctcgg cttcgagata atagccgctt tcctcgtgcg caaaacagcg gcaaccgaga
      361 atcgaattga agccgggaat cgcctcggac caacgtttct ccacgctgag cactgttgcc
      421 agcatcacat ccggccggcc aaaccagaaa ttgataaaat ggtgcagccg aaacgcaaga
      481 atatcgtgcg gatgatccca caagatgtcc tcccatataa ccgaggcctt gtccgggtca
      541 ccgtcagccc agactgtcag tgcgtgcaga tgcgcctgct cgcgttgggt ggcgtggcgc
      601 agtaacggac ccgccgtttg cgctgctgcg cgggccgccg gaacaagctg gctcttgtag
      661 ccaagcagca ggagatagcc tttgaggata tgtgccatgc cgcattcggg atcagcggca
      721 aacaacgtct ccatccgcgt catgatatcg aaacgatacg aaagataggc atcgatcgcg
      781 tgatcgaatg cctgcaccgc atcagccgat gccgccgtga ctggtaagcc gcgtgtatcg
      841 ttgtgcattc cgtgcatctc ctgggcttgc ctatagcgta ggtcagctcc cgaccttgat
      901 caattttcct ccagcggctt cactggcaac acgcccacca gaggcgcagg aggaaacgac
      961 gatgctggcc ttgttgcgag acctgaccgc gcgcgaacgg cgcactatga tcgcctgttt
     1021 cggcggctgg tctttggact cgctcgacgt gacgatttac acttttgtca ttccgtcatt
     1081 gttggcgctc tggcacatat ccaccgccga ggcgggcgaa ctggcgacga tcaccttgtt
     1141 ggtatcggct ttcggcggct ggatcgccgg agcgctggcc gaccgcttcg gccgcgtgcg
     1201 cgtattgcag gtcaccattg tttggtacgc gctgttcact ttcctgtgcg gcttcgccca
     1261 ggacttcaat caattgttcg tgttgcgcgc gatgcagggc ttcggcttcg gcggcgaatg
     1321 ggccgccggc gccgtgctga tgggtgaagt gatccgcgac cagtaccgcg gacgcgcagt
     1381 gggtttggtg cagaccggct actcgatcgg ttgggggacg gcggcactgt tgttcacctt
     1441 gttttttgcg gtgctgcccg aggccatggc gtggcgggcg atgttctgga tcggtcttgc
     1501 gccagcgctt ctcgtgttct ggatccgccg ctatgtcgag gaaccggacc tgcaggctcg
     1561 gcggaccgaa ccggttggct ggagccattt atttgccgcg ttgaagccgc cgcatctggc
     1621 gatcacctgg cgcgtcgcca tgatggttac cggcgcccag ggaggcggct acgcactggg
     1681 cacattcctg ccgacttttc tgaagacgca acggcatctg acttcggtcg gaaccggaag
     1741 ctatttgctg gtgttgatcc tgggtgcgtt ctgcggcttc attgccggtg cgtacctgtc
     1801 cgacgcgatc ggccgccgcg gcacattcct gctttccgcc attggatcgt tgatcgtaat
     1861 gctgatctac atgctggcgc cattgtccaa tgatgtgatc ctgccggtcg gcttcgtatt
     1921 gggcttcatc aatctgatga tgttctcgcc gatgggctcg ttcatgaccg aactgtatcc
     1981 aacttcggtg cgcggcgtcg cgcaaggttt ttgctacaat gtcgggcgag ggatcggtgc
     2041 gatctttcct gtgatggtcg gttttctcgc cgatcgctat ggcctggcta atgcaatcgt
     2101 ggtgttcagt ggtttcggct tcggtctgat gatcatcgct ttgttcctgt tgccggaaac
     2161 caagggacga tcgttggcaa gcctggaggc ggatgaggcg ttcccgcaaa gcgacgcggc
     2221 cggaaatctc ccggtgccgc cggctgccgg tgcgcgttag gtgttattcg aacagcgcca
     2281 ccgcgcgaat tggactcgcg gtgccgccgc ggatttttag tggaaagcca atgaaccgga
     2341 agcggccgcg gccaacgagc ttatgcagat tggccaggca ctccatgtga gtgatgccgc
     2401 gttcggcaca tgccatgtgc gcctgaaaat tcaactctcc ttccggggcc ggactgatgg
     2461 cttcgacccc aaacatgccg atgccgcggt cggcgagcca gtgcaccgag gccaaagcca
     2521 ggcccgggaa atcgtgctgg tatccgggct ttcccaataa ccgctcattg gtcgccatgt
     2581 agatcagcac ggtatcgcct ggtctgatgt cctgcctgga tttcgccaga gcgtcctcca
     2641 tctccggcac cgtgatcgca tggcccaaag gcacgtgcga cagatcgagg cagatcgccg
     2701 acgtataaaa tttctccaac ggcatttcat cgatcgacgc tgcgccgggc cgcggatcga
     2761 aatgcacggg agcatcgaca tgggtaccgg aatgatctcc gagattgagg gacagcgaca
     2821 tcgaggtaaa taccgtgtcg ccggcaacct ttttctcgga atggtcgccc catactgaaa
     2881 tcaccaccgg cgggtgtgac ggatgcacct gggtgcggtg aaacagctcc cggctgaggt
     2941 cgatcagttc catttttcgc tccgtgtttc ccggcatttc gccgccgaat cgccaggttt
     3001 gcaagccggc gcggtttctg gtgcgatgcc ggcagccaac aaggaggatg ctgccatgga
     3061 aactctgtcc gatgtcctgg aagacaccac gtcattcgag aaagtcgccg gcgggttcat
     3121 ctttaccgaa ggtccgctgt ggcatcccga cggttttttc tatttcgtcg atgtccgcgg
     3181 cagcggcctg tttcgcgtca cactgggcca accgcacgag aaagtccgcg agaccaatgg
     3241 cggcaatggg ctgaccttcg acctgcaagg ccgcctgatc aattgcgaag gcgacgcgcg
     3301 gcgggtcacc cgcaccgagc ttgacggcac cgtgggcacg ctgatcgatc gttttgaggg
     3361 caaacggctg aaccggccca acgacgtaat ctgtcactcg aatgg
//
LOCUS       DATAVD010001423         8640 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_507024, whole genome shotgun sequence.
ACCESSION   DATAVD010001423 DATAVD010000000
VERSION     DATAVD010001423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8640
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_507024"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..401
                     /locus_tag="VHX39_27285"
     CDS             <1..401
                     /locus_tag="VHX39_27285"
                     /inference="COORDINATES: protein motif:HMM:NF015682.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HEX3994897.1"
                     /translation="GAGVAFSAKAAGCVGIVIDGPATDVQELREYDMPVCARGLSTVT
                     GKPQFTFGEFCTPVACGGVSVEPGDAILADENGVLVMKPHEIAAAAYRAVEMQTDEKA
                     TLKRVANGERLPDINGTNARIAEIMRAAKQ"
     gene            complement(469..1518)
                     /locus_tag="VHX39_27290"
     CDS             complement(469..1518)
                     /locus_tag="VHX39_27290"
                     /inference="COORDINATES: protein motif:HMM:NF039236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX3994898.1"
                     /translation="MSFLRNTWYAALWAQDLEPGQLVPRVFLNEPVVLFRQANGQACA
                     IADMCAHRFSPLSKGKLVRGGHVRCPYHGLEFDGLGQCVGNPHGDGRIPTHMNVRSYP
                     VQERHSLLWIWMGEQPADPDKIPDFSLLDPGNGRQVSKRDWILMRAGYRLITDNLLDL
                     SHTAVIHEGILGSEHTIRAELTVTQTGNQILVARSVPNVPAPGLYDLMFRRNGPVDLW
                     MDMRWDPPGSMLNNTGVTAPGEPRDQGTGFWGTHFLTPETEDTTYYLFAAVRMNPISW
                     GEPLDSEIHRQISDLRRIAFEDQDQMIIKAQQENIRRSPYPLKPVLFDIDVGPVRYKR
                     VLDMMIHQEMQAGAN"
     gene            1770..2630
                     /locus_tag="VHX39_27295"
     CDS             1770..2630
                     /locus_tag="VHX39_27295"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3994899.1"
                     /translation="MTEARRVETGPGLVFDVSVCGPDNGPLVVLLHGFGVSRFYWNAQ
                     LTALGGAGYLAVAPNQRGYSADARPDPADHAQYQVDRLIGDAFDIIAALGRKDQRVHL
                     VGHDWGASLAWQIADTHPDRLASLTSLSRPHPLAFARALALPDGEQARRSQHHSRFLK
                     PDAGPEILANDANWLRTRLTSNGVPPEAIARHLSVLGTAPAMEAALAWYRARGVRHAP
                     VGPTRVPTLFLWGDHDDTVGRAAAEGTGEFIAAPYRFEVLPGVGHYAADQVPERVNEL
                     LLAHLASHPV"
     gene            complement(2633..3238)
                     /locus_tag="VHX39_27300"
     CDS             complement(2633..3238)
                     /locus_tag="VHX39_27300"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxychromene-2-carboxylate isomerase"
                     /protein_id="HEX3994900.1"
                     /translation="MTAIVEFHFDFGSPNAYLAHRVVPAIEQRTGAVFRYVPVLLGGV
                     FKATNNRSPGEAFAGIHNKLAYERLETERFVRRHRITEFNRNPFFPVNTLRIMRGAVA
                     AELDGTFARYVAAVFHHMWEQPKKMDEPDVIRAALDISGLDGAAMLARIEDAAVKQRL
                     IENTEASVARGTFGSPTFFIGNDIWFGKDRLRDVEEAIAAA"
     gene            complement(3246..3977)
                     /locus_tag="VHX39_27305"
     CDS             complement(3246..3977)
                     /locus_tag="VHX39_27305"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3994901.1"
                     /translation="MVAQRHASVAVVGAGDHIGAAIARRFAREGYLVHAGRRNGEKLT
                     PLVAEIAASGGRCVGKTLDARQEEAVAAFMRDADADAPLEVAVFNIGANVNFPLLDTT
                     ERVFRKVWELACYAGFLSGREAARMMVPRGRGSIFFTGATASMRGGKGYTAFASAKFG
                     LRAVAQSMARELGPQGIHVAHLVIDAGVDTAWVRERIKARSGSGEARTLMDPASIGEA
                     YWQLHQQPRDAWTHELDVRPAGEPW"
     gene            complement(4113..4556)
                     /gene="mscL"
                     /locus_tag="VHX39_27310"
     CDS             complement(4113..4556)
                     /gene="mscL"
                     /locus_tag="VHX39_27310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_024717071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HEX3994902.1"
                     /translation="MALPPGLSWVDEFKAFIARGSVIDLAVGVIIGAAFGGVVTSLVK
                     DVLNPIIGIFIGGVDFSNIFIPLNGKHYDTLVLAQQAGAPTVNIGLFINAIIQFLIMA
                     FVIFWVVKAVSRLHLRDLGAAAAAPTKTEVLLTEIRDLLKQSPAA"
     gene            complement(4664..5788)
                     /locus_tag="VHX39_27315"
     CDS             complement(4664..5788)
                     /locus_tag="VHX39_27315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX3994903.1"
                     /translation="MASLPLSNLLVVSLEQAVAAPYCSSRLADAGARVIKIERSEGDF
                     ARGYDKAAKGLSSYFVWLNRGKQSLVADIKDPNDAALLHRILKRADVFIQNLAPGAAA
                     RAGFGSTELRKRYPRLITVDISGYGETGDYAAMKAYDLLVQAESGLAMITGHPAGPGR
                     VGVSACDIACGMAAYSGILEALIARGNTGLGDALKVSLFDGMADWMNVPLLYYEGTGQ
                     APARLGLAHPSICPYGAFETNDHALVLISIQNEREWLEFCARFLDEPDLPQQPGFETN
                     VIRVANRAVVDAHVGAMFAKLTRDQAAAKLRAANTAYGFVNDVAAFSRHPALRRQTVE
                     TPNGPVAIAAPPVLRETSRSLGPVPAIGEHSSAIRTEFSA"
     gene            complement(5891..6355)
                     /locus_tag="VHX39_27320"
     CDS             complement(5891..6355)
                     /locus_tag="VHX39_27320"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX3994904.1"
                     /translation="MPETKPVMSGGCQCGAVRYALYELPESTVCHCRMCQKAVGGPFA
                     ALSKVPLAQFAWTRGTPGKFQSSSAAERHFCTGCGTPLTFHYLDGDAIEVTTGSLDLP
                     AQLPVTRNFGVETRLPWIDLLVPGRLPEVTTMDHATRVVVSLQHPDHDTPNE"
     gene            complement(6358..7527)
                     /locus_tag="VHX39_27325"
     CDS             complement(6358..7527)
                     /locus_tag="VHX39_27325"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3994905.1"
                     /translation="MDTPAPFADPHAEIREEVRKLCSRYPGEYWRKLDQERSYPTEFV
                     RALTEGGYLGALIPEEYGGAGLPLSAAAAILETVQAEGCNGAACHAQMYIMGTILRHG
                     TDKQKQTYLPKIATGELRLQAFGVTEPTSGTDTTSLRTFAKKEGDHYVVNGQKVWTSR
                     AEHSDLMLLLARTTPRDQAAKRTDGLSTFIVDMREALGKGLTIRPIRTMMNHNSTEVF
                     FDNMIVPAENLVGVEGRGFRYILDGMNAERLLIAAECIGDAKWFLKKASDYARERRVF
                     GRPIGQNQGIQFPLARAYAQMRAAELMVQAGCAKFEAGFTPGEEANMAKMLAAEASWA
                     AGEACIQTHGGFGFAEEYDIERKFRETRLYQVAPISTNLILSYIAEHVLGLPRSY"
     gene            7735..>8640
                     /locus_tag="VHX39_27330"
     CDS             7735..>8640
                     /locus_tag="VHX39_27330"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3994906.1"
                     /translation="MHRRRAVELAGAALATASVLPTALAQQRSFSTTRHAAPSSQRKL
                     TIMVGGAFTSMDPHSFNSGPNNALTGYVFEPLIRFDAEFRLQPALAVGWRAVDEKTWE
                     IKLRQGVKFHDGAPFTADDVVFSFARIPTLLRSPESFVYAVKPLTQTEVVDQYTLRLH
                     TAAPVPLMPYNLTNVAIVSKQHGDGMTTASFNSLQSAIGTGPYRATAFAIGEHAMFQR
                     NESWWDKQPYWATVSYRVVSDNTARIAALRTGEADVIDQVPTAEAAALKANPKVDVVA
                     MPGQRLIYLQPDASRMVTPFVTDQAG"
BASE COUNT         1660 a         2684 c         2624 g         1672 t
ORIGIN      
        1 gcggcgcggg cgtggcgttc tcggccaagg cggcgggatg tgtggggatc gtcatcgacg
       61 gaccggcgac cgatgtgcag gaactgcgcg aatacgacat gccggtctgt gcccgcgggc
      121 tgtcgacggt gaccggcaag ccgcagttta catttggtga gttctgcacc ccggtagcct
      181 gcggcggggt ctcggttgag cccggcgatg cgatcctggc ggacgagaac ggcgtgctgg
      241 tcatgaaacc gcatgagatc gcggcggcgg cataccgcgc cgttgaaatg caaacagacg
      301 aaaaagcaac gctgaaacgc gtcgccaatg gcgagcggtt gccggacatc aacggcacca
      361 acgcccgaat tgcagaaatc atgcgcgccg caaagcagta aggcgcgttc gcagggatgc
      421 tcggttcgcc gccgggagca aaacctggct ggttcgtcgc cgtcgatgtc agttggcgcc
      481 tgcctgcatt tcctgatgga tcatcatatc caggacccgt ttatatcgaa ccggtccgac
      541 atcgatatcg aacagtacag gcttgagcgg gtacggcgac ctccggatat tttcctgctg
      601 tgccttgatg atcatttggt cctgatcttc gaacgcaatg cggcgcaggt cggatatttg
      661 tcgatggatc tcgctgtcga gcggctcacc ccacgaaatc gggttcatgc gcacggcagc
      721 gaacaagtag taggtcgtgt cctcggtctc tggcgtgagg aaatgggtgc cccagaagcc
      781 ggtgccctga tcgcgcggct cgcccggtgc ggtgacgccg gtgttgttga gcatgctgcc
      841 aggcgggtcc caccgcatgt ccatccacag gtcgaccggg ccatttcgcc ggaacatcag
      901 gtcatacaga cccggcgccg ggacattcgg cacgctgcgc gcaaccagga tctggttgcc
      961 agtctgagtt accgtcagct cggcgcggat cgtgtgttcg ctgcccagaa tgccctcatg
     1021 gatgactgcg gtgtggctga ggtcgagcag gttatcggtg atcaggcggt atcccgcacg
     1081 catcagaatc cagtcacgct tactgacctg gcggccgttg ccgggatcaa gcagactgaa
     1141 atccgggatc ttgtctgggt cagccggttg ttcgcccatc cagatccaca gcagggaatg
     1201 cctctcctga accggatagg aacggacgtt catgtgtgtc ggaatccgtc catcgccgtg
     1261 cggattgcca acgcactgtc cgaggccgtc gaactcgagt ccatgatagg ggcaacggac
     1321 gtggccgcca cgaaccagct ttcccttgga gagcgggctg aaccgatggg cacacatgtc
     1381 tgcgatggcg catgcctggc cgttagcctg acggaacagc accactggct cattgaggaa
     1441 aacacgcggg acgagttgac ccggctccag gtcttgcgcc catagcgctg cataccaggt
     1501 gttgcgaagg aatgacattt gcttccccta ccagcgccgt gccgctgttt cgttttccgc
     1561 gtgaccggga cttccctgtt gagcgagcga cctggccatt cagcgggacg ttgccaccgc
     1621 cgctggcggt caacaagggc cactgcagtg tctttccgct ttcatcaggg cgcgatgcag
     1681 gcgctacacg gcggtcgcat actggacgtc gggtcaccac cgagataatc gccaccgtcc
     1741 catacaatca acccggccag gagccagcaa tgaccgaagc acggcgcgtg gagaccggac
     1801 ccggcctggt gttcgacgtt tcggtttgcg gtcccgacaa tgggccactc gtggtgttgc
     1861 tgcacgggtt cggcgtgtcc cggttctatt ggaacgccca attaacggcg ttgggaggag
     1921 cgggatatct ggcggtggca ccgaaccagc gcggctattc cgccgatgca aggcccgatc
     1981 cggcggatca tgcgcagtat caggtcgatc gactgatcgg tgacgccttt gacatcattg
     2041 cggctttggg ccgtaaggat cagcgggttc acctcgttgg ccatgactgg ggcgccagcc
     2101 tcgcctggca gatcgccgac acccaccccg atcgacttgc atccctgacg agcttgtcgc
     2161 gccctcatcc tctggcattc gcccgcgcgc tggccctgcc ggacggcgag caggcgcgac
     2221 gctcgcagca tcactcacgc ttcctgaaac cggatgccgg accggaaatt ctggcaaacg
     2281 acgccaactg gctgcgcacg cgtctgacct cgaacggcgt cccgcccgag gcgatcgcgc
     2341 gccacctgtc ggtgcttggc accgcgccgg cgatggaggc cgcattggcc tggtatcgtg
     2401 cgcgcggcgt gcgtcatgcg ccggtcggtc cgaccagggt gcctaccctt tttctgtggg
     2461 gcgatcacga cgacacagtc gggcgcgcag ccgctgaggg gaccggcgag ttcattgccg
     2521 caccctatcg atttgaggtc ctgccgggcg tcggacatta cgctgccgat caggttccgg
     2581 aacgggtcaa cgaattgcta ctggcgcatc tcgcgagcca cccggtctga attcaggcgg
     2641 cggcaatcgc ctcctcgacg tcgcgcagcc ggtccttgcc gaaccagata tcgttaccaa
     2701 tgaagaaggt cggcgatccg aaggtgccac gcgccaccga agcttccgta ttctcgatca
     2761 gtcgttgctt taccgcggca tcttcaattc gcgccagcat cgcagcgcca tcgaggccgg
     2821 atatatccaa agcggcacgg atcacatccg gctcatccat cttcttcggc tgttcccaca
     2881 tgtgatggaa caccgctgcg acgtatcggg caaatgtgcc atccagttcg gcagcgaccg
     2941 caccacgcat aatccgcagc gtattcaccg gaaagaacgg atttcgattg aactcggtga
     3001 tgcgatggcg gcgaacgaag cgctcggtct caagccgctc gtacgccaat ttattgtgga
     3061 tcccggcaaa cgcctctccc ggagagcggt tgttcgtcgc cttgaacacc ccgcccaaca
     3121 gcaccggcac gtagcggaac accgcgccgg tccgttgttc gatcgccgga acgacgcggt
     3181 gcgccaggta ggcgttcggg ctgccgaaat cgaaatggaa ttccacgatc gcagtcatgg
     3241 ccgcgtcacc acggttcgcc ggcgggtcgc acatcgagtt cgtgggtcca ggcatccctg
     3301 ggttgttgat gcagttgcca gtatgcctca ccgatcgagg caggatccat cagggtccgc
     3361 gcttcgccgg aaccgctgcg cgccttgatc cgctcgcgca cccaggcggt atcgaccccg
     3421 gcgtcaatca cgaggtgggc gacgtggatc ccctgcggcc caagttcccg cgccatgctc
     3481 tgggctacgg cgcgcaggcc gaatttggcg ctggcgaagg cggtatagcc tttaccgcca
     3541 cgcatgctgg cggtggcgcc ggtaaagaaa atcgagccgc ggccgcgtgg taccatcatg
     3601 cgcgcggcct cccggccaga caggaatccg gcatagcagg cgagttccca cactttgcgg
     3661 aacacccgct cggtggtgtc gagcagcggg aaattgacgt tggccccgat gttgaagacc
     3721 gcgacctcca gtggcgcatc agcgtcggcg tcccgcatga aggcggccac ggcctcttcc
     3781 tggcgggcat ccaacgtttt gccgacacac ctgccgcctg acgcggcgat ctccgcgacc
     3841 aggggcgtca gtttctcgcc gttgcggcgc ccggcatgga cgagataacc ctcacgggcg
     3901 aatcggcggg cgatcgcggc gccaatatgg tcgcccgccc cgacaaccgc caccgaagcg
     3961 tgacgctgcg cgaccatgac acaccttccc acgaatgagt atcatgataa taggaactgc
     4021 acgccgcagt gtccagtagc ccctgcacga tcgtcgcatc gtcctgcgca gtggcggtca
     4081 gggccggcga ttggttgcgc cggtcgccgt gatcaggccg cgggtgactg tttcagcagg
     4141 tcgcgaattt cggtcaacaa gacttcggtc tttgtcggtg ccgccgccgc tgcaccaaga
     4201 tcgcggaggt gcaggcgtga caccgctttg accacccaga aaatgacgaa ggccatgatc
     4261 aggaactgga tgatcgcgtt gatgaacagg ccgatgttga ctgttggcgc gccagcctgc
     4321 tgcgcgagca caagtgtgtc gtaatgcttg ccattaagcg ggatgaaaat gttggagaag
     4381 tcgacgcccc caataaaaat accgatgatg ggattgagga catctttcac cagactggtg
     4441 acgactccgc caaacgccgc accgatgatg acgccgactg cgagatcgat gacactgccg
     4501 cgcgctatga atgctttgaa ctcgtcgacc caggacagac caggtggtaa cgccataacg
     4561 gttcccctgt ttggtttcag tcctgttgca atactcgtat ggtcacgcca gcgcaactcg
     4621 cggcgctctg tttcgctacg caactgtcgc taaattgcca cgatcaggca gagaattcag
     4681 tgcgaatcgc agatgagtgt tcgccgattg ccggcacggg gcctagtgac ctggaggtct
     4741 cacgcaacac cggaggtgct gcgatggcaa ccggaccgtt cggtgtctca acggtttggc
     4801 gtcgcaacgc cggatggcga gagaacgcgg caacatcgtt gacgaagcca taagcggtgt
     4861 tggcggctcg aagtttggcg gcagcctgat cccgcgtcag tttagcgaac atcgctccga
     4921 cgtgagcgtc gacgacggca cggttggcaa cacgaatcac gttggtttca aagcctggtt
     4981 gttgcggcag gtcgggttca tcgagaaatc tggcacaaaa ttccagccat tcgcgttcgt
     5041 tttgaatgga aattaaaacc agcgcgtggt cgttggtctc gaatgcgcca tagggacaaa
     5101 ttgagggatg cgcgaggccg agccgagccg gagcctggcc ggtgccctca taatacagca
     5161 gcggaacgtt catccagtcg gccattccgt caaacaggct gaccttaagc gcgtcgccca
     5221 ggccggtgtt cccgcgggcg atcaatgcct ccagaatacc ggaatacgca gccatcccgc
     5281 aagcgatgtc gcatgccgaa acccccactc gtcctgggcc cgccggatgg cccgtgatca
     5341 tggcgagacc ggactccgcc tggaccagca ggtcgtaagc cttcatggca gcatagtcgc
     5401 cggtttcgcc gtagccggag atgtcgacgg tgattaggcg agggtatctc ttccggagtt
     5461 cggttgaccc gaagccagcg cgcgccgctg cgcccggggc gagattctgg atgaacacgt
     5521 cagcgcgttt gagaatacgg tgcagcagcg ctgcatcatt cggatcttta atgtcggcaa
     5581 caagactttg cttacctcga ttgagccaaa caaaataact ggacaggccc tttgcagcct
     5641 tgtcgtagcc gcgggcgaag tcgccttcgg accgctcgat cttgatgacc cgcgcgccgg
     5701 catcagcaag acgggacgaa cagtacggcg ccgcgacggc ctgttcgaga gagacgacga
     5761 ggagattgct gaggggaagt gatgccatga accttcagtt acatggaccg agagaacgtt
     5821 caagcattcg aatcttgccg gtgcaggccg gtttcatgtc ctgcaacgcc aggcctcgcc
     5881 gcgcccaatc tcactcattc ggggtgtcat ggtcagggtg ctgcaggctg acaaccactc
     5941 gcgtggcatg atccattgtc gtgacctccg gcagccggcc gggtaccagc aggtcgatcc
     6001 acggtagccg cgtctcaacc ccaaagttcc tggtcaccgg caactgggcc ggcaaatcga
     6061 gactgccagt cgtcacctca atcgcatcgc cgtcgaggta atgaaacgtc agcggtgtcc
     6121 cgcacccggt gcaaaaatgc cgttccgccg ctgaggagct ctggaatttg cctggcgtcc
     6181 cacgagtcca ggcaaattgc gcgagcggca ctttcgacaa tgccgcgaac ggccctccca
     6241 ccgctttctg gcacatgcgg caatggcaga cagttgattc cggcagttcg tacaacgcgt
     6301 atctcactgc gccacactga catccaccgg acatcaccgg tttggtttcg ggcattgtca
     6361 ataactcctc ggcaatccca acacgtgctc cgcgatatat gacaaaatca gattcgtgct
     6421 gatcggcgcc acctgataca gccgtgtctc gcggaatttt ctttcgatat cgtattcttc
     6481 cgcaaagccg aacccgccat gcgtttggat gcacgcctcg ccggcagccc aggaggcctc
     6541 ggccgcgagc attttggcca tgttggcttc ctcgcccggg gtaaacccag cctcgaattt
     6601 cgcacaaccc gcctgcacca tcagctcggc cgcccgcatc tgtgcgtaag cccgcgccag
     6661 aggaaactgg atgccctgat tttgcccgat cggccggccg aatacccggc gctcgcgcgc
     6721 atagtccgat gctttcttca gaaaccattt cgcatcgcca atgcattcgg ccgcgatcag
     6781 caaccgttcc gcattcatgc cgtcgaggat atagcggaag ccgcggcctt cgacccccac
     6841 cagattctcc gccggcacga tcatgttgtc gaaaaacacc tcggtcgagt tatggttcat
     6901 catggttcgg atcggccgga tcgtcagtcc cttacccaaa gcttcccgca tatcgacgat
     6961 gaaggtggac aaaccgtcgg tccgtttcgc cgcctgatcc ctcggtgtgg tgcgcgccag
     7021 caacagcatc aggtcggagt gttccgcccg gctggtccat accttctgac cgttgaccac
     7081 ataatgatcg ccttccttct tcgcgaaggt gcgcaacgat gtcgtgtcgg taccgctggt
     7141 cggctcggtc accccgaacg cctgcaggcg cagttcaccg gtggcaattt tgggcaaata
     7201 ggtctgcttc tgtttgtccg taccgtgccg caggatggtg cccatgatat acatttgcgc
     7261 gtgacaggcg gcgccgttgc agccctcggc ctgcacggtt tccaggatcg cggctgccgc
     7321 cgacaacggc agcccggcgc cgccatattc ctcggggatc agcgcgccga gatagccgcc
     7381 ctcagtcaac gcccgaacaa attccgtggg gtagctgcgc tcctggtcga gcttgcgcca
     7441 atattcacca ggataacggc tgcacagttt cctgacttcc tcgcgaattt ccgcatgtgg
     7501 gtcggcgaaa ggcgctggcg tgtccatgct cggtctccgg gttcaaccct ggcttaggac
     7561 aggggcagga ccgggatcaa gcgctggtcc ttgcagacct gccagctctc gcatgtggag
     7621 gttcggcacg gtaagatcgg caggtccaaa atttgaacgc cacgacgtgc gctgcgtgag
     7681 tcgggcttct ggcgagcaag gtcaacatcg cttcagggta cgaggggcac gtcaatgcat
     7741 cgacgcagag ctgttgagct ggccggcgca gcgttggcta cggcgtcggt gctaccgacg
     7801 gctctggcgc aacagcgtag tttttccacc acgcggcacg ccgctccgtc gtcgcagcgc
     7861 aagctgacga tcatggttgg cggcgcgttt acctcgatgg atccgcactc ctttaattcc
     7921 gggccgaaca atgcgctcac cggctatgta tttgagccgc tgatccgctt cgatgcggaa
     7981 ttccgattgc aacccgcgct cgctgtcggg tggcgggcgg tcgatgagaa aacctgggaa
     8041 atcaaactcc gccagggtgt gaaattccac gacggcgcac cgttcaccgc cgacgacgtg
     8101 gtattttcgt tcgcgcgcat ccccacgctg ctgcgaagcc cggaaagctt tgtctatgcg
     8161 gtgaaaccgc tcacgcaaac cgaggtcgtg gatcagtaca cgctccggct gcacaccgcc
     8221 gcaccggtcc ccttgatgcc gtacaacctg acgaatgttg ccatcgtgtc gaagcaacat
     8281 ggcgacggga tgaccacagc atcgtttaat tcattgcaat cggcgatcgg aaccggaccc
     8341 taccgcgcga cggcgttcgc catcggcgaa catgcgatgt tccaacgcaa cgaaagctgg
     8401 tgggacaagc aaccgtactg ggcgacggtc agttatcgtg tggtgtccga caacaccgcg
     8461 cggattgccg ccctgcgcac cggcgaggcc gacgtcatcg atcaggtgcc gaccgctgaa
     8521 gccgccgcat tgaaagcgaa tccgaaagtg gatgtcgttg ccatgccggg tcagcgactg
     8581 atttatctgc aacccgacgc gtcgcgtatg gtcacgccgt tcgtgaccga tcaggccggc
//
LOCUS       DATAVD010001424         1779 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2742025, whole genome shotgun sequence.
ACCESSION   DATAVD010001424 DATAVD010000000
VERSION     DATAVD010001424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2742025"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..699)
                     /locus_tag="VHX39_27335"
     CDS             complement(139..699)
                     /locus_tag="VHX39_27335"
                     /inference="COORDINATES: protein motif:HMM:NF025052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX3994907.1"
                     /translation="MRRQRPVLVVIGGFPGTGKSALARRLSVELAIPRLSSDRLGRTI
                     RDGLDSPLKRGEAFHAGYDVLFTLADDFLESGCSLLIDTSMGWDFQWRRLDAIVAARP
                     DAVFLPIILRCSRQICTERIAQRHQDSPTEAAPDQVLQQPHIPELWHYLDILDRPDVR
                     VIDASGPPDVVLGEARRCLAGHLPLN"
     gene            758..1711
                     /locus_tag="VHX39_27340"
     CDS             758..1711
                     /locus_tag="VHX39_27340"
                     /EC_number="2.7.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase family
                     protein"
                     /protein_id="HEX3994908.1"
                     /translation="MTRAGPRGMMAAVDRDQITADVAARLVAEQFPQWADLPVVPVGL
                     NGWDNTTFRLGEELSVRLPSGGGYVPQIEKEHRWLPFLAGRLPLPIPEPIAIGRRNDE
                     FPWPWSIYRWIDGEPASVGRIADVTEFAADLAKFLTALQAIDGSDGPPPGKHSSARGG
                     PVARWEEGTRQAIDLLAADIDTKAVTEVWDAALASTWNRPLVWVHGDVVGSNLLVQNG
                     ALSAAIDFGCSAVGDPACDMVMAWTFFAGESAKLFRRGLRLDDATWARGRGWALWKAL
                     IVLSAERQEGADAQAAARRFGWRYSAYEIIDLLLDDHRQSI"
BASE COUNT          334 a          543 c          606 g          296 t
ORIGIN      
        1 cgtcaactca gcatcgatcg gcacagacga agggtacaca catgactgag ataacacaaa
       61 actgtgtcat ctcagttggc gcgacagtcg cgttcaacaa gcgttccccg ggtccacgct
      121 gtcgaaggat gtcgcgggtt aattgagtgg caggtgtccg gcaaggcagc gccgggcctc
      181 gcccaggacg acgtccggcg ggccgctggc gtcaatgacc cgtacatcag gacggtcgag
      241 gatgtcgaga tagtgccaca gctcaggtat atgtggctgc tgcagcacct ggtcgggcgc
      301 ggcctcggtc ggactgtcct gatgacgctg agcgatccgc tccgtgcaga tctggcggga
      361 gcagcgcagg atgatcggta ggaagaccgc gtcgggccgg gcagcgacaa tggcgtccag
      421 ccgccgccat tgaaaatccc agcccatgct cgtgtcgatc agtaacgaac aacccgactc
      481 cagaaagtca tcggccaggg tgaaaaggac gtcgtatccg gcgtggaatg cttcaccgcg
      541 cttgagcggg ctgtccaggc catcgcggat tgtccgaccc agacggtccg agctcaacct
      601 cgggatggcc aactccacgg acagccgccg ggccagcgcg ctcttgccgg tccccggaaa
      661 cccgccaatc acgacaagga caggacgttg tcgccgcatg attggaccgt acccgcgagc
      721 ccgctgggct gcacgctgcg ctggacggga aaacgggatg acccgcgccg gcccgagggg
      781 gatgatggcc gccgtggaca gggatcagat cacggctgac gtcgcggcta ggcttgtcgc
      841 cgagcagttt ccgcagtggg cggacctgcc cgtcgtgccg gtcgggctca acgggtggga
      901 caacaccacg ttccggcttg gcgaggagtt atccgtccgc ctgcccagtg gcggcgggta
      961 cgtaccgcag atcgaaaaag agcaccggtg gctgccgttc cttgccggac gattgccatt
     1021 gccgatcccg gagccgattg ccatcgggcg gcgtaatgac gaatttccct ggccatggtc
     1081 gatttatcgg tggatcgacg gcgagcccgc gagcgtgggc cggatcgccg acgtgaccga
     1141 gtttgcggcg gatctcgcga aattcctgac cgcgctccaa gccatcgatg gcagcgacgg
     1201 gccgccaccc gggaaacaca gctcagctcg aggcggcccg gtcgccagat gggaagaagg
     1261 gacgcgacag gcaatcgacc tgttggctgc ggatatcgac accaaagccg tcaccgaggt
     1321 gtgggacgcc gctctggcca gcacctggaa ccggccgctg gtgtgggtgc acggggacgt
     1381 tgtcggctcg aacctgctgg tgcaaaacgg cgccctgagc gcggcgatcg atttcggctg
     1441 ttccgccgtt ggcgaccctg cctgcgacat ggtcatggca tggacattct ttgccggcga
     1501 aagcgccaag ttattccggc gcggcctgcg tctggacgat gcgacctggg ctcgcggccg
     1561 gggctgggcg ttgtggaaag cgctcatcgt gctcagtgcc gagcggcaag aaggcgccga
     1621 cgcgcaagcc gcggcgcgcc gtttcggctg gcgatacagc gcctacgaga taattgacct
     1681 gctattagac gatcaccgcc agtcgatcta gccgacccgg aggtcatggg atatgagttt
     1741 gatacggctg gtcgacgtct gcaagcggtt cgacaggcg
//
LOCUS       DATAVD010001425         1861 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1435530, whole genome shotgun sequence.
ACCESSION   DATAVD010001425 DATAVD010000000
VERSION     DATAVD010001425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1435530"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..618
                     /gene="lptB"
                     /locus_tag="VHX39_27345"
                     /pseudo
     CDS             1..618
                     /gene="lptB"
                     /locus_tag="VHX39_27345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019089781.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
     gene            730..>1861
                     /locus_tag="VHX39_27350"
     CDS             730..>1861
                     /locus_tag="VHX39_27350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HEX3994909.1"
                     /translation="MAIAPRLDLRQSQTLVMTPQLRQAIKLLQFSNIEVNSFVEEEME
                     RNPLLERDDSPEPPVGERAALDQLEPRTAAVMDSADAARSETLPDDGGSPLDAVHAET
                     YDPGGAGDGAPLVGRIDGGGGSHGFEGDDRGIDDFASDDRSLRDHLGEQLRLNLSDMV
                     DRMIGAHLIALLCPAGRLTAEPAAIALAMGLPLERVEAVRARMMRFDPVGLFARDLRE
                     CLGAQLAERNRLDPAMQTLLDNLELLARRDNRRLMALCGVDAEDLTDMIAEIKALDPK
                     PGASWDTTPAQLVVPDLLMRRLPDDTWIIELNPETMPRVLVNERFYTKVAPHAKKDEK
                     AFLTERLANANWLVRSLQQRAQTILKVAAEIIRQQDGFLRLGV"
BASE COUNT          336 a          584 c          624 g          317 t
ORIGIN      
        1 ggggccgaac ggcgccggca agaccacgac tttctacatg atcgttggcc tggtgaggcc
       61 cgataccggc gccatcagcc tggacggcgc cgacatcacc cggctgccga tgtaccggcg
      121 cgcccgcctg ggaatcggct atctgccgca ggaagccagc gtgtttcgcg gcctgaacgt
      181 ccagcagaac gtcatggccg cgttggaggt ggtcgagccc gacgcctcca cccgcgaccg
      241 catgctggac gagctgctgg ccgaatttgg catcagccat ctgcgccgca ccccggccct
      301 ggcactgtcc ggtggcgaac gccggcgcgt ggagattgcc cgcgcgctcg ccacccagcc
      361 atcctatatc ctgctcgatg agccgctggc cggcatcgac ccgatcgccg tcggcgaaat
      421 ccgcgatctg gtcaaacacc tgaaggaccg cgacatcggc gtgctgatca ccgaccacaa
      481 cgtggggaga cgctggatat catcgaccga gcttacatca tgcatgcggg gcagctcctg
      541 atggagggca aacccagcga agtcgttgct cacgaaggtg tgcgacgagt gtatctgggc
      601 gaaaaattca gcttgtgaga ttttgaccgg ccccttggca caaccggcag acacggttgc
      661 acgctttttg catgcgatat gacggaaacc atttgaccca gcgtcgaatg gcccgataat
      721 cgcctgatca tggcgatcgc cccccgtctc gacttacgcc agagccagac cctggtcatg
      781 acgccgcaac tgcgtcaggc catcaagctt ctgcaattct ccaacatcga ggtgaattcc
      841 ttcgtcgagg aggagatgga gcgcaatccg ctgctggagc gcgacgactc tcccgaaccg
      901 ccggtggggg aacgggcggc gctcgatcag ttggaacccc gcaccgccgc cgtgatggat
      961 tccgccgatg cggcgcgatc cgaaacgctg ccggatgatg gcggttcgcc gctggatgcg
     1021 gtgcatgccg aaacctacga tccgggcgga gctggcgacg gtgcgcccct cgtcggacgg
     1081 atcgacggcg gcggcggcag tcatggtttc gagggcgacg atcgcggcat cgacgatttc
     1141 gccagcgacg atcgctccct gcgggaccac ctgggtgagc agttgcggct gaacctttcg
     1201 gacatggtgg atcgcatgat cggggcgcat ctgatcgccc tcctgtgccc cgccggccgg
     1261 ctgacggccg aacccgcggc gatcgcactg gcgatgggcc tgccgctgga gcgggtggag
     1321 gcggttcgcg cccgtatgat gcgattcgat ccggtgggac tgtttgcccg cgacttgcgg
     1381 gaatgcctag gggcgcagtt ggcggagcgg aatcggctgg acccggcgat gcagaccctg
     1441 ctggataacc tcgaactgct ggcccggcgg gacaaccggc ggctgatggc gctgtgcggc
     1501 gtcgatgccg aggacctgac cgacatgatc gccgagatca aggcgctgga cccgaagccg
     1561 ggggcctcgt gggacaccac gccggcgcag ttggtggtgc ctgatctgct gatgcggcgt
     1621 ctgccggatg acacgtggat catcgaactg aaccccgaga cgatgccgcg ggtgctggtc
     1681 aacgaacgat tttacaccaa ggtcgcgccg cacgcgaaga aggatgaaaa agcctttctg
     1741 accgaacgtc tggcgaatgc gaactggctg gtgcggtcgt tgcagcagcg cgcgcagacc
     1801 atcctgaaag tggctgccga gatcatccgc cagcaggatg ggtttctgcg gctgggtgtc
     1861 g
//
LOCUS       DATAVD010001426         3314 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_507152, whole genome shotgun sequence.
ACCESSION   DATAVD010001426 DATAVD010000000
VERSION     DATAVD010001426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3314
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_507152"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..353
                     /locus_tag="VHX39_27355"
     CDS             <1..353
                     /locus_tag="VHX39_27355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994910.1"
                     /translation="FSVTLCLGTSKIRSYGAGCGIAANIGGTFLRIFVRPRPRMRRIL
                     FQRCRGPERAVFHPMTAPKNEGTLNGMKVVLRVPVIKKFAVHTRGKTFISAIDVPKLV
                     QMCLGIVRYFGAVI"
     gene            complement(373..1629)
                     /gene="oxlT"
                     /locus_tag="VHX39_27360"
     CDS             complement(373..1629)
                     /gene="oxlT"
                     /locus_tag="VHX39_27360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010515384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxalate/formate MFS antiporter"
                     /protein_id="HEX3994911.1"
                     /translation="MSITEAVPKPASLPSRWAQLGFGLVAMMAISSPQYVWTLFVKPF
                     QTATGGTLPAIQVTFSLLIVLQTWLSPFQGWLIERFGARFLITAGCILSGAGWVVSAG
                     ITSVTGLYLTYGLFCGVGTGIVYIGIVGLMLKWFPDRRGLATGVVAAGYGFGAILTTF
                     PIDTMIKGSGYQATLVTFGVILGGVGALAGLFMRQPPELAECVRSGTNPGSAVSSGAM
                     LKTPVFWLLFVMMTMMSTGGLMVISQFAPFTRSFGIADVTIFGMAALPFALTLDRITN
                     GLTRPFFGFVSDRIGRENTMLIAFSLEAAAVLLMLSTRDNALLFALMSGVVFFGWGEI
                     FSLFPSTLTDTFGAQDATTKYGFLYMAQGIGSVLGGPVAAALHDSTGSWIPVFITVIT
                     MDVLTAVLAFFVLKPMRTAYLMRVAN"
     gene            1899..2366
                     /locus_tag="VHX39_27365"
     CDS             1899..2366
                     /locus_tag="VHX39_27365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994912.1"
                     /translation="MALGVVAAIAIPPVLAGIGTTCHQASWYWAGEEATVRGLAPART
                     TLVRMGNIAAIPNNAQGAVLALPRAGTWNFDIVANALPPVGTVLLWIEGPTHSAIVTA
                     GGISGYNQACVFPHLPALGNYSTCLPGQLVANRRSCFTIAENDLVAQAVVLGI"
     gene            3088..>3314
                     /locus_tag="VHX39_27370"
     CDS             3088..>3314
                     /locus_tag="VHX39_27370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994913.1"
                     /translation="MLSDLLAGGEIGSYRQQMEALLFGEGGREPVKGFVDFYGYHPAA
                     AGWLFSGWVAQGWREGQSPDRIVLSFDEGDI"
BASE COUNT          691 a          990 c          996 g          637 t
ORIGIN      
        1 tcttctctgt tactctgtgc ctcggtacct ctaaaataag atcttacggc gcaggttgcg
       61 gcatcgccgc taatatcggt ggcacgttct tacgcatctt cgtacgccca cgtccgcgca
      121 tgcgcaggat tttatttcag aggtgcagag gaccagagcg tgcggttttt cacccgatga
      181 cagcgcccaa gaatgaagga actctcaatg gcatgaaagt cgttctgcgg gtaccggtca
      241 tcaagaagtt tgctgtgcat acgagaggaa agacgtttat ctccgcaata gacgtgccca
      301 aattagtgca gatgtgtctg ggtatcgtcc ggtactttgg tgccgttatt taactcgatc
      361 cgggcagggg attcaatttg ccacgcgcat cagatacgcc gtccgcatcg gtttcagaac
      421 gaagaacgcc aacactgcgg tcaacacgtc catcgtgatg accgtaatga acaccgggat
      481 ccaactgcct gttgaatcat gcaacgctgc cgccaccggc cctccgagga ccgacccgat
      541 cccctgcgcc atatacagaa atccgtattt ggtcgttgca tcctgggcgc cgaatgtgtc
      601 tgtcagcgtc gacggaaaca gtgagaaaat ctcgccccag ccgaaaaata ccacgcccga
      661 catcaaggca aacagcaagg cgttgtcgcg cgtgctcagc atcagcagca ccgccgccgc
      721 ctccagcgag aacgcgatca gcatggtgtt ttcccggccg atccgatcgg acacaaagcc
      781 gaagaacggc cgagtcagtc cgttggtgat ccggtccagg gtcagcgcga acggcagtgc
      841 tgccatgccg aagatcgtga catccgcaat gccgaaactg cgggtgaacg gggcgaactg
      901 tgaaatcacc atcagcccgc ctgtcgacat catggtcatc atgacgaaca acagccagaa
      961 caccggggtt ttcaacattg ccccggagga cacagcggac ccagggttgg ttcccgacct
     1021 cacgcattcc gccaactccg gcggctggcg catgaacagg ccggccaatg cgccaacgcc
     1081 acccagtatg acgccgaacg tcaccagcgt cgcctgatag ccggagcctt tgatcatcgt
     1141 atcgatcgga aatgtggtga ggatcgcgcc aaacccatag cccgccgcga ccacccctgt
     1201 ggccagcccg cgccgatcgg gaaaccattt cagcatcaga ccgacaatgc cgatatagac
     1261 gatgccggtg ccgaccccgc aaaacagtcc gtaggtcaaa tacaggccgg tcacgcttgt
     1321 gatgccggcc gagacgaccc agccggcacc gctcaatata cagccagcgg tgatcaagaa
     1381 gcgggcaccg aagcgctcga tcagccagcc ctgaaacggc gagagccagg tctgcaacac
     1441 gatcaacagc gagaaagtga cctggatcgc cggtaaggtt ccgccggtcg ccgtctggaa
     1501 cggtttgacg aataaagtcc agacatattg cgggctggag atcgccatca tggcgaccag
     1561 tccaaacccc aactgagccc agcgggaggg gagggaagcg ggctttggaa cggcttcggt
     1621 aatggacatg ggccctccgc tggcaatgct gccgctcgcg tggcggcgcg gatgcgattg
     1681 cttcatataa cactgcgtca gatccctgtg catcttgcgt gccagcgtgc gctcaacgcc
     1741 ggcgcagggg agggctcccc cccgacgccg gcacgtccgg gcgatattgc gcagtaacga
     1801 taggtcgttg ggtcaacgaa catattgcca gccggtcgcc gtaccttgcc tccgacatgg
     1861 cggtcgagca tgtttggtcg gacctcggag gaaatgtcat ggctctcggc gtggtagctg
     1921 ccatcgccat tccacccgtg ctcgccggca ttggcacgac ctgccaccag gcgagttggt
     1981 actgggctgg cgaggaggcg accgtgcgcg ggctggcgcc ggcgcggacg accctcgtca
     2041 ggatgggcaa tatcgcggcc ataccgaata atgcgcaggg tgccgtgctg gcgctcccgc
     2101 gcgcgggcac gtggaatttc gacatcgtcg ccaatgcctt gccgcccgtc ggcacggtgc
     2161 tgctgtggat cgaggggccg actcattcgg caatcgtgac ggcgggcggg atttccggct
     2221 acaatcaggc ctgcgtgttc ccgcatttgc ctgccctggg caattactcg acctgcctgc
     2281 cgggtcagtt ggtggccaac cggcgcagct gttttacgat cgctgagaac gatctcgtcg
     2341 cccaggcggt ggtgctcgga atttaagtgg gcacttaaag cgatcaggtc ccctcgggca
     2401 ccacctggcg aagcactgac cgctcggttg ccgaggtccg cgatctgacc attcatcgca
     2461 tgacgcgcgg cacggattaa atggccgaga ggaccgcgac gaggggcggc ctggaacgat
     2521 cttgcaatct gcgaactgta gcctgtctga gacgcttgat gaatgaccga tcagtcgggt
     2581 ggatacgcag gcgccatcag gggtcgggtg caaagttgga cgcattccat gtgacgtgac
     2641 gacgaggtcc caactgccgt gaagaaccta tccgccgcac ccaaggccaa acctgcaaca
     2701 ccgaaagaac ccggtcgcct ggccgtggtc cctccggtcg agaaagacag ctacgacttc
     2761 gaaggataca tcgactttct cggataccat tcccaggcga ggggatggtt cgtgggaggt
     2821 tggatcgcat atccctggcc ttccgggcag gatccacaac atgctgccgc ggttctggca
     2881 gataattcga tgatcagttg caacctttcc atgttttatg accgcgcaga tttagccggc
     2941 cgaggtgtcg gttttgtatt tttcttcccg gtatcggaaa cccaaaccga agcagtcctg
     3001 tgcaccgtgg tcatggtcgg gggcgctccg cgtacgattt ttccgagttc cggcgttacg
     3061 cctcgaagtg aaccgcaact cgccgcagtg ctgagcgatc tgctggcggg aggcgagatt
     3121 ggatcgtacc ggcagcaaat ggaggctctg ctttttggtg aaggcggccg cgaaccggtc
     3181 aaaggctttg tcgacttcta cggctaccac cctgcggcgg ctggttggct gttctcgggc
     3241 tgggttgccc aaggatggcg cgaaggacaa tccccggatc ggattgtgct ctccttcgac
     3301 gagggcgata tcga
//
LOCUS       DATAVD010001427         3261 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_320607, whole genome shotgun sequence.
ACCESSION   DATAVD010001427 DATAVD010000000
VERSION     DATAVD010001427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3261
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320607"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..814)
                     /locus_tag="VHX39_27375"
     CDS             complement(<1..814)
                     /locus_tag="VHX39_27375"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3994914.1"
                     /translation="MLQQLMGRAAEAHKHGRFDEAEGLYLQVLQTRPDLFEAQHSLGV
                     LRGQQGRHEEALALFEAALRVHPDAAGVLVNCGMVLHNLKRHTEALASFNKALAISPD
                     YALALNNRGPVLSALGRDRDALKSYIAALAVRPDYADAYNNMGGLLTELGRLDDAKAA
                     LHRALELNPRLMGAYVNLGKCKIFTADDPHLAAMQALERDMGLSKADRTRLHFALGKA
                     YADIKDHNRAFESLSHGNALKRAQIVYDEAATLRLFKSTEATFTRDLVSAKAG"
     gene            1218..2435
                     /locus_tag="VHX39_27380"
     CDS             1218..2435
                     /locus_tag="VHX39_27380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994915.1"
                     /translation="MTLSETSFTILDTLFNFGPHDMIPSDAAWQHLISNVQASGRKAA
                     LAITGGGSGAISELLRVPGGSRLLIEAQVPYDTEALATFLGFAPAQASSADTAIAMAR
                     AARLRAARLVPADTDLVGLGATAALVSDRPRRGEHRFHIAFANATGVVHCTGVLAKGR
                     RDRAGEEDLVSRAIVLFLAQGCGVDAPSPRSLLDADEQFAQTVVSTEDHIDRLLTGAL
                     DRVTAQPDGQLTLSAPQPVVLLPGSFNPLHSGHVMLARIAEEIRQQPLAFEISVTNVD
                     KPPLAGETVRQRLAQFVWKSPVELTRAPTFLEKSRLFPKATFVIGADTAERLVAAKYY
                     GDDELQMHGALDEIGNSGASFLVAVRIDAAARVRTLSDILVPHRYVDLFSEIPEHRFR
                     LDTSSSEIRALIA"
     gene            complement(2457..>3261)
                     /locus_tag="VHX39_27385"
     CDS             complement(2457..>3261)
                     /locus_tag="VHX39_27385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3994916.1"
                     /translation="AGAIVTNVTAQATELQATAKSMTSTAEDTSRQSTIVAAAAEQAM
                     QNVNTVAASTEELAASVREILHQVTQSTQLAQETLNEANAADKGMQALASAMEHIGQV
                     VGLISGIAGQTNLLALNATIEAARAGDSGKGFAVVATEVKALADQTAKATQEISTQIS
                     SIQEATKGSVRSIQGIVTLIGRVNEAATTIASAVEEQGAATAEIARNVSEAAKGTGDV
                     SNNIAGVNTAAQHTGAAAGEVYASASNLSQNGEALKTQVDAFLREVRAA"
BASE COUNT          571 a         1009 c          995 g          686 t
ORIGIN      
        1 agcccgcttt tgccgagaca agatcacgcg taaaggtggc ttctgtgctt ttgaacaagc
       61 gtaaggttgc cgcttcgtcg taaacgattt gtgctcgctt tagtgcattg ccgtgcgata
      121 aactttcgaa cgcgcgatta tgatccttga tgtccgcata ggccttgccg agtgcgaaat
      181 gaagacgcgt tcgatcggct ttcgataagc ccatgtcgcg ctcaagcgct tgcatggccg
      241 cgaggtgggg atcgtcggcg gtgaagatct tgcatttacc cagattaacg taggcgccca
      301 tgagcctggg gtttagctcc aacgctctgt gcaaggctgc cttggcgtcg tcgagtcgcc
      361 cgagctcggt gagcagccct cccatgttgt tgtaggcatc ggcgtaatcg ggccgcaccg
      421 ccagagcagc gatgtagctc ttaagcgcgt cacggtcgcg gccaagggcc gagagcacag
      481 gccctcgatt atttagcgcc agggcatagt cggggctgat cgcgagcgcc ttgttaaagc
      541 ttgccagtgc ttcggtgtgc cgtttcaaat tgtgcaggac catcccacag tttaccagta
      601 ctccagcagc gtcaggatga actctcagcg ctgcttcgaa cagcgcgagc gcttcctcat
      661 ggcggccttg ctggccacgc aacacgccaa gactgtgctg cgcttcgaat aaatcgggtc
      721 gcgtttggag gacctgcaaa tataaccctt cggcctcgtc aaaccggcca tgcttatgcg
      781 cctctgcggc ccgccccatt aattgctgga gcatgagtgt ttcctcctgg gacaatggca
      841 cgttggtcat gaggtacgtt gaaagcgatg cggtgaggaa ttcgaaaaaa cgtttcgcgg
      901 cgtgcctgga ggcatcggtg gcaccacgat cgacccggcg acccggacag aaacacgggc
      961 gcgcgccggc cggatgacgg tcagattctg acccggtttc gattcggtgt ctcgggggtc
     1021 ctttgccatg cggttcgtgt aacataacgc ccgttatggt cgcgagtacc atccccttcg
     1081 gcgacctgcc gcggcgtcta tggcttgccc accggcacaa tgacactcga aagagccgca
     1141 agtctttccc ggctgagctc acgccggtcg acgactgaat ttgctccgag aaggaccgca
     1201 gccaggtcct cgcaaagttg acactgtcag aaacgtcttt caccattctc gacacactgt
     1261 tcaacttcgg accccatgac atgatcccgt cggacgctgc gtggcaacat ttgatctcca
     1321 acgtgcaggc gtccggccgc aaggctgcac tcgcgatcac cggcggcggt agtggggcga
     1381 tcagcgagtt gctgcgtgtt cccggcggct cccggctgct gatcgaggca caggttcctt
     1441 acgacacgga ggcgctcgca acgtttctcg gctttgcacc ggcccaggcg agcagcgctg
     1501 acacggcgat cgcgatggca cgagccgctc gattacgcgc agccaggctg gtgccggcgg
     1561 acaccgatct ggttggcctc ggcgcgacgg cggcactggt cagcgaccgt cctcgccggg
     1621 gcgagcatcg gtttcatatc gcattcgcca acgccaccgg cgtcgtgcac tgcaccggcg
     1681 tgctggccaa gggccgacgc gatcgcgccg gcgaagaaga tctcgtttcg cgcgcgatcg
     1741 tgctgttttt ggcccaggga tgcggggttg atgcgccgtc gccgcgtagc ctgctggatg
     1801 cggacgaaca gtttgcgcag acggtcgttt cgacggagga tcatatcgat cggctgctga
     1861 ccggtgcgct cgatcgtgtc acggcacaac cggatggcca actgacgctg tcggcgccgc
     1921 agccggtcgt gttgctgcca ggctcattta acccgctgca ctctgggcat gtgatgctgg
     1981 cgcgaatcgc cgaggagatc aggcaacaac ccctggcatt tgaaatctcg gtcaccaacg
     2041 tcgacaagcc gccgctggcc ggcgagacgg tgcggcagcg gttggcgcaa ttcgtctgga
     2101 aatcgccggt cgaactgacc cgggcgccca ccttcctcga gaaatcgcgc ttatttccaa
     2161 aggccacgtt cgtgatcggc gcggacaccg cggagcggct ggttgcggcg aaatattacg
     2221 gcgatgacga acttcaaatg cacggcgcgc ttgacgaaat cggcaattcc ggggccagct
     2281 ttctggtcgc cgtgcggatc gacgcagccg cgcgcgtgcg cacgctgagc gacatcctgg
     2341 tgccgcaccg ctacgtcgat ttgttcagcg aaatcccgga gcatcgtttc cgtctcgaca
     2401 cgtcgtcatc cgagatccgt gcgctgatcg cgtagtacct ggaatcgttg aagcgcctat
     2461 gccgctcgca cttcgcgcag gaaggcatcg acctgggtct tcagggcttc accgttctga
     2521 cttaaattgc ttgcggacgc gtacacctca cctgccgcag cgccggtgtg ctgcgccgcg
     2581 gtgttgacgc cggcaatatt gttgctgacg tccccggtgc ccttggctgc ttccgacaca
     2641 ttgcgagcaa tctcggccgt cgctgcaccc tgttcctcga ccgcggaagc aatggttgtg
     2701 gcggcctcat tcactctgcc gatcagtgtc acaatgccct ggatcgaccg aacggatccc
     2761 ttcgtggcct cttgaattga cgagatttgc gtcgaaatct cctgtgtggc cttggcggtt
     2821 tgatcggcca gcgccttgac ctcggtggcc acgaccgcaa accccttgcc cgagtcgccc
     2881 gcgcgcgccg cttctatcgt ggcattcagc gccagcaaat tggtctgacc ggcgattccg
     2941 ctgatcagcc caacgacctg gccgatgtgc tccatcgccg aggcgagcgc ctgcatcccc
     3001 ttatccgcag cattcgcctc gttcaaggtt tcctgcgcga gttgggtcga ttgggtgacc
     3061 tgatgcagga tctctctcac cgaggccgca agttcctcgg ttgaggcagc aacggtgttg
     3121 acgttctgca tggcctgctc ggcagcggcc gccacgatgg tcgactggcg cgacgtatcc
     3181 tccgccgtcg aggtcatcga ttttgccgtc gcctgcaact cagttgcctg ggcggtgaca
     3241 ttggtgacaa tggcgccggc c
//
LOCUS       DATAVD010001428         3821 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_882692, whole genome shotgun sequence.
ACCESSION   DATAVD010001428 DATAVD010000000
VERSION     DATAVD010001428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3821
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_882692"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /locus_tag="VHX39_27390"
     CDS             <1..356
                     /locus_tag="VHX39_27390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994917.1"
                     /translation="TTSRPLINYLPDRLALAVARRSGHYGPDLTWTVALRHGIRGATV
                     AEIIASIDAPAGTIRRVTSDQRDARDLLELWWRGESRHTRQKALAYRGLSWLRRLTGV
                     VVSPWVNVVFRKTSA"
     gene            413..1351
                     /gene="thyX"
                     /locus_tag="VHX39_27395"
     CDS             413..1351
                     /gene="thyX"
                     /locus_tag="VHX39_27395"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050797 - thymidylate synthase (FAD)
                     activity [Evidence IEA];
                     GO_process: GO:0009265 - 2'-deoxyribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HEX3994918.1"
                     /translation="MPLTDAQAAEIAALRSQATTTARPTVPALEAMLYTAFPVLDHGF
                     VRVIDYMGDDAAIVQAARVSYGRGTRRVSEDAGLIRYLMRHRHSTPFEMCEIKYHVKL
                     PIFVARQWIRHRTANVNEYSARYSILDREFYIPAPAQLAAQSVSNRQGRGSVLSGDEA
                     EEVLTLLREDAARNYDHYAAMLNEDADGQAVDPGRQGLARELARMNLTLNTYTQWYWK
                     TDLHNLFHFLSLRADAHAQYEIRVYAEAMLQTVEAWVPQAARAFRDYRLGAAMLSAGM
                     LEVVKRMLAGETVTRPDSGLNQREWTELMAVLGRSA"
     gene            complement(1389..2828)
                     /locus_tag="VHX39_27400"
     CDS             complement(1389..2828)
                     /locus_tag="VHX39_27400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3994919.1"
                     /translation="MTTFTGDGGHLMYQSGIYAQGRLPRRERPELGSVEEPARAIPVF
                     RECDVLVVGGGPSGTAAAIAAARCGADVILLERNNHLGGLSTGGLVIWIDRMTDWTGQ
                     QVIRGIANDLLDRLPKDALAGPPRGLWGSADTATAAYWKERTAAYHGIVTWSPTIDPE
                     HLKLISQELVLEHNVQLIFHAWGAMPLLQDGAVAGVIFESKAGRQAIRAAVTIDCTGD
                     GDNFHRAGAASYSDVDTRDIHHCINTAWLFGGVDMQRWITFKSSQPDAFAAFMDRGRA
                     ACGGLFERAFVSWRNDVALFMGPRLAGYSAVDVEDLTEVDIRSHRLMAAHLDVYRAHA
                     PGFETAFLMLSAPQTGVRHARRLVGADRVTREDWPSGVARKDEIGVSPSLSPKYPVVS
                     VPYGALLPAELDGLLVAGRAVSCDATSHSFLREIPQCWMTGQAAGVAAALAADAGMTP
                     REVPIGRLQEALVRQGAMVRAEVAVALPD"
     gene            3016..3702
                     /gene="rpe"
                     /locus_tag="VHX39_27405"
     CDS             3016..3702
                     /gene="rpe"
                     /locus_tag="VHX39_27405"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEX3994920.1"
                     /translation="MTVPPTRRVAVAPSVLAADFGRLQEEVAAVTKAGADWLHFDVMD
                     GHFVPNMSFGPLVLQALRPHSTLPFDVHLMITPVDPFVAAFAEAGADHILFHPEAGPH
                     PHRTLQLIRSLGKKSGLVLSPGTPVETIAWLLELADIVLVMSVNPGFGGQQFLASQLP
                     KIAALRGMIDAVARRDGRPIALAVDGGITPETAPHVVAAGADTLIAGTSVFGAGDRSA
                     AIDALRGGAV"
BASE COUNT          645 a         1246 c         1247 g          683 t
ORIGIN      
        1 acaccaccag caggccgttg atcaattacc tgccagatcg gttggcgttg gcggtggcga
       61 ggcgcagcgg gcactacggt cccgacctga cctggactgt cgcgctgcgt cacggcatcc
      121 gaggcgcgac cgtcgccgaa atcatcgcca gcatcgacgc ccccgccggc acgatccgtc
      181 gcgtgacgtc agatcagcgc gatgcgcgcg acctgctgga gctctggtgg cggggcgagt
      241 cgcggcacac acggcagaaa gctctggcct atcgaggcct gagttggctg cgccggctga
      301 cgggcgtggt ggtatcgccc tgggtcaatg tggttttccg caaaacctct gcgtagccgc
      361 gaatcggccg tgctgatttc ccatgtttga gtggttgttg taggtctgcg gcatgccact
      421 gaccgacgca caggctgcgg aaatcgcggc actccgcagc caggccacaa ccaccgcccg
      481 gccgactgtg cccgcgctgg aggcaatgct ctacacggct ttcccggtcc tggatcacgg
      541 cttcgtccgg gtcatcgatt atatggggga cgatgcggcg atcgtacagg ctgcgcgggt
      601 ctcgtacggc cgcggcacaa ggcgggtgtc ggaggatgcc ggcctgatcc gctatctgat
      661 gcgccaccgt cactcgaccc cgttcgagat gtgcgagatc aagtaccacg tcaaattgcc
      721 gattttcgtg gcgcggcagt ggatcaggca ccgcaccgcc aacgtgaacg aatattctgc
      781 tcgctattcg atcctggacc gcgagttcta catccccgcg cccgcgcaat tggccgccca
      841 gtcggtgagt aatcggcagg gtaggggcag cgtgctgtca ggcgacgagg cggaggaggt
      901 cctgactctg ctgcgtgagg acgcggcgcg gaattacgac cactatgccg caatgctgaa
      961 cgaggatgcg gatggtcagg ccgttgaccc tggccggcag gggttggcgc gggaactggc
     1021 gcggatgaat ttgacgctga atacctacac gcaatggtac tggaaaaccg atctgcacaa
     1081 tttgtttcac ttcctctcgc tgcgtgccga tgcccatgcg caatacgaaa tccgggtcta
     1141 cgccgaggcg atgttgcaga ccgtcgaagc ctgggttccg caggcggctc gcgcgttccg
     1201 cgactatcga ctgggtgcgg caatgctatc tgccggtatg ctggaggtgg tgaagcggat
     1261 gcttgccggc gaaacggtaa cccggccgga tagcgggctg aaccaacggg aatggaccga
     1321 gttgatggcg gtgttgggac gctccgcctg accgccgggc gcagagtgtt gttcgggagc
     1381 agcgaatctt aatcgggcag agcaactgcc acctcggccc ggaccatggc gccctgtcgc
     1441 accagcgctt cctgtagccg gccaatcggc acctcgcgcg gcgtcatccc ggcatccgcc
     1501 gccaacgctg ccgccacgcc ggctgcctga cccgtcatcc agcattgcgg tatctcgcgc
     1561 aggaacgagt ggctcgtggc gtcgcatgag accgcccgtc cggcgaccaa cagcccgtcc
     1621 agttccgccg gcagcagagc gccataaggc acggagacca ccggatactt cggcgacagc
     1681 gacggcgaca ctccgatctc gtccttccgt gccacaccgg agggccagtc ttcccgcgtc
     1741 actcggtcgg ctcccaccag ccgccgcgca tggcgcacgc cggtctgtgg cgcggacagc
     1801 atcaggaatg cggtttcaaa acccggcgcg tgcgcgcgat acacgtcgag gtgcgcagcc
     1861 atcagccggt gtgagcggat gtcgacttcc gtcagatcct cgacatcgac cgccgagtag
     1921 ccggccagcc gcggccccat gaacagcgcg acatcgttac gccaggagac gaaagcacgt
     1981 tcgaacaatc caccgcatgc tgcacggccg cgatccatga acgctgcgaa cgcgtcgggc
     2041 tggctgcttt tgaacgtgat ccaacgctgc atgtcgacgc cgccaaatag ccaggccgtg
     2101 ttgatgcagt gatggatgtc gcgcgtgtcg acatcggaat aactcgccgc gccggctcgg
     2161 tggaaattat cgccgtcgcc ggtgcaatcg attgtgacgg cagctcggat cgcctggcgg
     2221 cccgccttgc tttcaaagat cacgccggca accgcaccat cctgcagcaa cggcatggcg
     2281 ccccaggcat ggaaaattaa ctgtacattg tgctccagta cgagttcctg ggagatcagc
     2341 ttcaggtgct cggggtcgat cgtcggtgac caggtaacga tgccgtgata ggcggcggtg
     2401 cgctctttcc aatacgctgc ggtggccgta tcggcgctgc cccacaggcc acgcggcgga
     2461 ccggcgagcg catccttcgg caagcggtcg agcaaatcat tggcaatccc gcggatcacc
     2521 tgctgtccgg tccagtcggt catgcggtcg atccagatga cgaggcctcc ggtggacagg
     2581 ccgcccagat ggttgttccg ttcaagtaat atgacgtcgg cgccgcaccg tgcggcagcg
     2641 atcgcggctg cggtgcccga agggccgccg cctaccacca aaacgtcgca ttctcgaaac
     2701 accggaatgg cgcgggccgg ttcctcgacc gaaccgagtt cggggcgctc gcgccgcggc
     2761 agcctgccct gagcgtagat gccggattga tacatcagat ggccgccgtc gccggtgaac
     2821 gtggtcatgc ccagggttcc ttgccgtgtg atcgcctgct tgccggaggg gcgcacatca
     2881 cgccctcgaa cggaactggt ttagcgcggg atcgccgtgg aatgaagcga acgtccgggc
     2941 ggcctgcctc acgcttgata ctgccacgcc tgctccgcct tgtgcaccgc cgcccccgat
     3001 gccaggtaac attgcatgac cgtgcccccc acccgtcgag tcgccgtggc gcccagtgtg
     3061 ctggcggccg actttgggcg tctgcaggag gaagtggctg cggtgacgaa ggccggtgct
     3121 gactggctgc atttcgacgt catggacggt catttcgtcc ccaacatgag cttcggaccg
     3181 ctcgtgttgc aggcgttgcg cccgcattcc acgctgccgt tcgacgtcca cctgatgatc
     3241 acaccggtcg atccgttcgt cgctgcgttc gccgaggcgg gcgctgacca tatcctgttc
     3301 caccccgagg ccggaccgca tccgcaccgc acgctgcaac tgattcgctc gctcgggaaa
     3361 aaatccgggc tggtgctcag tccgggaacg ccggtcgaaa ccattgcgtg gctgctcgaa
     3421 ctggccgaca tcgtgttggt gatgtcggtc aatcccggat tcggtgggca gcagttcctg
     3481 gcctcgcaac tgcccaagat cgccgcgctg cgcgggatga tcgacgcagt ggcgcggcgc
     3541 gacggcaggc cgatcgcgct ggccgtggat ggcggcatca cgcccgagac cgcccctcac
     3601 gtggtggctg ccggcgcaga tacgctgatt gccggcactt cggtgttcgg cgccggcgat
     3661 cgctccgccg cgattgatgc gctgagaggc ggcgctgtgt gaccaccggg tctcgcctgc
     3721 tccgcaatgc gcgtcaggtc gtggctcggc tgccgctgca ccgttttgcg cgcgtgccgg
     3781 acgcgcccac tcagccggtg cgtgacccct ggccgggcga c
//
LOCUS       DATAVD010001429         6450 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2559034, whole genome shotgun sequence.
ACCESSION   DATAVD010001429 DATAVD010000000
VERSION     DATAVD010001429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6450
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2559034"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..399
                     /locus_tag="VHX39_27410"
     CDS             <1..399
                     /locus_tag="VHX39_27410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994921.1"
                     /translation="GVHYFTLRNSFDPGARFMTMPENRTALRAVPGRRHREAVFGPLA
                     DETGAIIGPQPDGMGAWRYQAPAGDRLIGPDPAWGRGQYWVVVAGAMINQGQTIPPLS
                     CIFVYPDDAPLDACAGPDGVDVIAMQFPRA"
     gene            406..1776
                     /locus_tag="VHX39_27415"
     CDS             406..1776
                     /locus_tag="VHX39_27415"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3994922.1"
                     /translation="MAKQIRLNAFDMNTVGHQSPGLWTHPRDRSDSYNTLDYWTSLAR
                     TLERGQFDAIFLADVLGIYDVYKGSPRTALENAVQVPVNDPLMLIPAMAVVTEHLGFG
                     VTCALSYEHPYPFARRMSTLDHLTRGRIGWNIVTGYLESAARGMGRSEQTGHDERYEI
                     AEDYMVAVYKLWEASWEDGAVLRDRAGGRFADVDKIHRILHEGRYFKVDAIHLCEPSP
                     QRTPVLYQAGASSRGRQFAAEHAECVFINGPSRKVVGGIVADIRRRAAAAGRNPQDLV
                     IFTMMTVITDQTREAALEKFRDYQRYVSSDGALTLMSGWTGVDFSALPKHEPVRFQAA
                     NAMFSALESFTTADPDRTWTVDEIARHAGIGGRGPVIVGSYQDVADEFASWVSETDVD
                     GFNLAYAVTPETFVDIVDLVVPELRRRGLYKSEYAPGTLREKLYGPGRARLPESHPAA
                     RVRISR"
     gene            1787..2314
                     /locus_tag="VHX39_27420"
     CDS             1787..2314
                     /locus_tag="VHX39_27420"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEX3994923.1"
                     /translation="MNADELRAKQAPLKQLYRDKPEAALIPAHAEGTLDLSDVAITVR
                     SWHGDVTAGLHKAGGGSGELACSADMLLEAMVACAGVTLRAVATAMGVTIRSGKVSAD
                     GIWDARGTLGVDRATPVGLTEVTLRFDIDSDADQAKLERMIQTTERYCVILQTLKNPP
                     KLSVAIGGTAQVGSQ"
     gene            complement(2318..3028)
                     /locus_tag="VHX39_27425"
     CDS             complement(2318..3028)
                     /locus_tag="VHX39_27425"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX3994924.1"
                     /translation="MKLKEFLSVRGIEFDSINVLEDAAGLAELRRIGARSVPVLSRGD
                     DWVFAQNLGHVVKFLGLNEKTGPELTPDQLTAKTDLILRTAIRLIPQMPDIHLTTEVP
                     NRPRSYKVLAHHIFRIQEVFLEAANGANLTYEALGGRPTEAMQTFADIAAFGEQVRSN
                     YAAWWAAKADKSGKDPIETYYGPQILHETLERATWHSGQHVRQWIMLLGMQGITADRP
                     LTPADFAGLPMPINAWDG"
     gene            complement(3142..4101)
                     /locus_tag="VHX39_27430"
     CDS             complement(3142..4101)
                     /locus_tag="VHX39_27430"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3994925.1"
                     /translation="MARTIAVGIGIMEYPFDTTDGFWRWVDLCEQGGIDSIWQTDRMI
                     SRSPILECMTALAAIAGRTRRIKFGVNVVSVAMRDPVLLAKQCATIDVLSQGRLLPGF
                     GIGSPRGPEWTAMHLDPKTRGRTTDEALEIIHRLWSGEALDYDGRHFKLTGASIAPLP
                     VQPDLPMWIGGSSEAAVRRTAKYGTGWQAGAETPATVGQVIADIKTAVVAAGRHIDED
                     HYGAALAYRFGGPDDPGVAKVMEEYKTRTGRDARDHFAMGDATLIAARIAEYVEVGAC
                     KFILRPAAKGDADMYLQTKRLIEEVLPLVAARWPRPAKKLAAE"
     gene            complement(4106..4681)
                     /locus_tag="VHX39_27435"
     CDS             complement(4106..4681)
                     /locus_tag="VHX39_27435"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX3994926.1"
                     /translation="MTERVQMVSLDRARQLGEEWGTPGPRTTRSAFRMLANNPPLAKA
                     TFALLSQLLEHNTFDARLRELMIMRIGWVTGSAYEWTQHWRVATTTAGVPPEDVLAVR
                     DWRASDRLTAADKAVLAATDESLSGKAISDTTWAELTKHITEPGQQVEFIVAMGNWTM
                     FSMLLRNLKIPVEDGVAVWPPDGVSSPAAEA"
     gene            complement(4952..6340)
                     /locus_tag="VHX39_27440"
     CDS             complement(4952..6340)
                     /locus_tag="VHX39_27440"
                     /inference="COORDINATES: protein motif:HMM:NF033594.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HEX3994927.1"
                     /translation="MIRFQSVLGRYEADELNQIEAAEMLGVSERTFRRWCRRFEDEGE
                     SGLLDRRLGRRSGKRVPADDEAEIERLYRTRYRGLTAQHFHEHLMRDHLYRWSYTWTK
                     LFLQSKGLLDKAPRRGVHRRKRPRRPLPGMMLHQDGSRHAWLEGQPAMDLIVTMDDAT
                     SEIYSAFLVEEEGTASTFRALLEVFTRHGLALSLYTDRGSHYFHTPEAGGKVDRDQPT
                     QVGRALAQLSIEHIAAYSPQARGRSERLFGTLQGRVPKDLALAGITTVEVANAWLRDT
                     YISAHNARFATKAEQEGSAFVAATGLDLAETLCVQEERIVGNDNCVSFENRKLQIPES
                     PLRPHFVKATVKVHQYPNGGLAIFHGRRCLGRYDSKGAQIDAPATDGSENTRSVPSGR
                     EDRAVLGAVKDASRRCAVASPKTRPSLTAPPRDARSRGRSAPGNGPDSLTRKSLPETP
                     LLRRTKQERAAI"
BASE COUNT         1181 a         2049 c         1968 g         1252 t
ORIGIN      
        1 ggcgtgcact actttacttt gcgtaacagt ttcgatcctg gcgcgcgctt catgacgatg
       61 ccggagaacc ggaccgcgtt gcgcgcagtc cccggccgcc gccaccggga ggcggtgttc
      121 ggaccgctgg cggatgaaac cggggccatc atcgggccgc aacccgacgg catgggcgcc
      181 tggcgatatc aggcccccgc aggagaccgg ctgatcggtc ccgatcccgc ctggggccgc
      241 ggtcagtact gggtggtggt cgcgggcgcc atgatcaacc aaggccagac cattccgccg
      301 ctgtcgtgca tcttcgttta ccccgacgat gcgccgttgg atgcttgcgc cggaccggat
      361 ggggtcgacg taatcgccat gcagtttccg cgcgcctgaa ccgcgatggc gaagcaaatc
      421 cggctgaacg cgttcgacat gaacaccgtc ggccatcaat cgccgggctt gtggacccat
      481 ccgcgcgatc ggtcggattc gtacaatacg ctggactatt ggacgagcct ggcgcggacg
      541 ttggagcgtg gccagtttga tgcgattttt ctcgccgacg tgctggggat ctacgacgtt
      601 tacaaagggt ctccgcgcac cgcgttggag aatgccgtgc aggtgccggt gaacgatccg
      661 ctgatgctta tcccggcaat ggccgtcgta accgagcatc ttggtttcgg cgtcacctgc
      721 gcactgtcct acgagcatcc ctacccgttc gcacgccgca tgagcacgtt ggatcacctg
      781 acacgtggcc ggattggctg gaacattgtc accggttatc tggaaagtgc tgcgcgtggc
      841 atggggcgat ccgaacaaac cggccacgat gaacgttacg aaattgccga agactacatg
      901 gttgctgtct acaaactctg ggaagcgagc tgggaggacg gcgccgtgtt gcgcgatcgt
      961 gccggtggcc gatttgccga tgtggataaa attcatcgca ttttgcacga aggccggtat
     1021 ttcaaggttg acgctatcca tctgtgcgag ccgtctccgc aacgaacccc cgtgctgtac
     1081 caggcgggtg cgtccagtcg tggccggcaa ttcgccgcag aacatgcaga atgcgtgttc
     1141 atcaacggcc cctccaggaa agtcgttgga ggcatcgttg ccgacattcg ccggcgtgcc
     1201 gccgcggccg gacgcaaccc acaggatctt gtcatcttca cgatgatgac cgtgataacc
     1261 gaccaaacgc gcgaagcagc gttggagaaa ttccgggatt atcagcgtta tgtcagttcg
     1321 gatggtgccc tgacactgat gtccggctgg accggagtgg atttttccgc actgccgaag
     1381 cacgaaccgg tacgcttcca ggctgcgaac gccatgttct cggcactgga atcattcacc
     1441 accgccgatc cggaccggac ctggacagta gacgagattg cccggcatgc cggcatcggc
     1501 ggccgtggac ccgtcattgt cggatcgtat caggatgtcg ccgacgagtt tgcctcgtgg
     1561 gttagcgaaa ccgatgtcga cggcttcaat ctcgcctatg cggtgacgcc ggagacattt
     1621 gtcgacatcg tcgatctggt ggtaccggaa ttgcgtcgcc gcggtctgta taaatccgaa
     1681 tacgcaccgg gtacgttgcg ggagaaacta tacggtccag gacgggcacg actgccggag
     1741 agtcatccgg cggctcgggt gcgaatatcg agatgaagga accgccatga atgccgatga
     1801 actgcgcgcg aaacaggcgc cgttgaagca attgtaccgc gataagccag aggctgcgct
     1861 gatcccggcg catgctgagg gcacactgga ccttagtgac gtcgccatca cggtgcgttc
     1921 ctggcatggc gatgtcaccg cggggctgca caaagcgggt ggcggcagcg gtgaactcgc
     1981 gtgttccgca gacatgttgc tggaggcgat ggtcgcttgc gccggggtta cgctacgggc
     2041 ggtggcaact gcgatgggag tgacgatccg ctcgggcaag gtttcggctg acgggatctg
     2101 ggacgcgcgc ggcaccctgg gggtcgatcg cgccacgccg gtcgggctga ccgaggtcac
     2161 gttacggttc gacattgaca gcgatgccga tcaggcgaaa ctggagcgga tgatccagac
     2221 caccgaacga tattgcgtca ttttgcaaac gttaaagaac ccgccgaaac tatcggtggc
     2281 gatcgggggc acagcccagg tcgggtcgca gtgagtgcta cccgtcccag gcgttgatcg
     2341 gcatcggtaa tccggcaaaa tccgctggcg tcaacggacg gtcagccgtg atcccctgca
     2401 tccccaacag catgatccat tgcctgacgt gctggccact gtgccaggtc gctcgttcca
     2461 acgtctcatg caggatttgt ggaccgtagt aagtttcgat cgggtcctta ccggacttat
     2521 ccgctttggc ggcccaccac gcggcgtagt tgctgcgcac ctgctcaccg aacgcggcga
     2581 tgtcggcgaa ggtttgcatc gcctcggttg gccggccgcc aagtgcttcg taagtcaggt
     2641 tggcgccatt ggcggcttcc aggaacacct cctggatgcg gaagatgtga tgtgccagca
     2701 ctttatagga gcgcggccgg ttcggcacct cagtggtcag gtggatgtcg ggcatctgcg
     2761 gtatcagccg aatcgctgta cgcagaatga gatccgtctt cgcggtcaat tgatccggcg
     2821 tcagttcggg tccggtcttt tcgttcagcc cgaggaactt gaccacatgg ccaaggttct
     2881 gcgcaaagac ccagtcatcg cctcgcgaca acaccggcac cgagcgtgcg ccgatacgcc
     2941 tcagttccgc cagaccggca gcatcttcaa gcacgttgat cgaatcgaac tcaatcccac
     3001 ggaccgagag aaactctttg agtttcagac aactcgttca accaggctgc cagaacgctt
     3061 tcagttttac cacgtcagcc atggccatct ccatttcgtg caccctgact aagggccgcg
     3121 gcagcgaagg tcaagcgccg ctcattccgc cgccagtttc ttggccggtc tcggccagcg
     3181 cgcagcgacc aatggcagca cttcctcgat caggcgtttc gtttgcagat acatatcggc
     3241 atcgcctttc gccgccggac gcaggataaa cttgcacgca ccgacctcga catattcggc
     3301 aatacgcgcg gcgatcagcg tggcgtcgcc cattgcgaaa tgatcgcgcg cgtcgcggcc
     3361 ggtgcgggtc ttgtattctt ccatcacttt ggccacgccg ggatcgtccg gcccgccaaa
     3421 ccggtacgcc agagcggctc cgtaatgatc ttcgtcgata tgccggccgg ccgcgaccac
     3481 ggcggtcttg atatcggcga tcacctgacc gacggtcgcc ggcgtctcgg caccggcctg
     3541 ccagccggtg ccgtatttgg cggtccgccg caccgccgcc tccgacgagc cgccgatcca
     3601 catgggcagg tccggctgca ccggcagcgg cgcaatcgag gcaccggtca atttgaaatg
     3661 cctcccgtca tagtccagcg cttcgccgct ccacagccgg tgaatgatct ccaacgcttc
     3721 atccgtcgtg cgaccgcggg tcttcggatc gagatgcatc gccgtccact ccggaccgcg
     3781 cggactgccg atgccgaacc ccggcagcag acgtccttgc gacagcacat cgatcgtggc
     3841 acattgtttc gccagcagca cgggatcgcg catcgctacc gacaccacat tgacgccaaa
     3901 tttaatgcgc cgcgtacgtc cggcgatggc cgccagagcc gtcatgcact ccaaaatcgg
     3961 cgagcggctg atcatccggt ccgtttgcca aatcgaatcg atcccgccct gttcgcacag
     4021 atcgacccaa cgccagaaac cgtccgtggt gtcgaacggg tattccataa tgccgatacc
     4081 gacagcgatg gtgcgtgcca ttgtcttatg cctccgccgc gggtgaggaa acaccgtcgg
     4141 gcggccagac cgcgacgcca tcctccaccg ggattttcag gtttcgtagc agcatcgaaa
     4201 acatcgtcca attgcccatg gcaacaatga actccacttg ttgaccgggc tcggtgatgt
     4261 gtttggtcaa ctcggcccag gtggtgtcgg agatggcttt gccggagagg gactcgtcgg
     4321 tggcagccag caccgctttg tcggctgcgg tcagtcggtc cgacgcgcgc cagtcgcgca
     4381 ctgccaatac atcctccggc ggaacaccgg cggtggtggt ggcgacgcgc cagtgctgcg
     4441 tccactcata ggccgagccg gtgacccaac caatgcgcat gatcatcagt tcgcgcaggc
     4501 gggcatcgaa cgtgttgtgc tccaacagtt gcgacaacaa agcaaacgtc gctttcgcca
     4561 gcgggggatt gttcgccagc atgcgaaacg ccgagcgcgt ggtgcgtggt ccaggcgtgc
     4621 cccattcctc accgagttgc cgggcccggt cgagagacac catctgcacg cgttcggtca
     4681 tcgtccgcac ctccggtcgt tcacctgatc gtcccccgcc tcgcgcctcg ccgcaatccc
     4741 cggcagggcg cattgggcga gagagcgtca gggcttcgcc ctggaaccca ccaggggagc
     4801 tctgctcccc tggccccctc gtcaaagggc gaggcccttt gaaatctatc cattgggtgg
     4861 gttacaaggg ccgcgccctt ggcggagtac ggggcggagc cccgatgctt cctgtcgata
     4921 gctaattaac ttgtccggtt tatgtagcac atcatatggc cgctcgttcc tgtttcgtcc
     4981 gccggaggag cggtgtctcc ggtagagatt tcctggtgag actgtcggga ccatttcccg
     5041 gagccgacct gccacgtgag cgtgcgtcgc gcggaggggc ggtcaaagat ggcctcgtct
     5101 tgggcgaggc caccgcgcag cggcgcgaag cgtccttgac ggccccgagc acggcgcgat
     5161 cctcgcggcc ggacgggacg gaacgtgtgt tttcgctgcc atccgtggcc ggcgcatcaa
     5221 tctgagcgcc cttgctgtcg taacggccca ggcaacgccg gccgtggaag atcgccagac
     5281 caccgttcgg atactgatgc accttcaccg tcgctttcac gaagtgcggg cgcagcgggc
     5341 tttcgggaat ttgtagcttg cgattctcaa acgatacgca attgtcgttg ccgacaatgc
     5401 gttcttcctg gacgcacaga gtttcggcga ggtccagacc ggtcgcggcg acgaacgcgc
     5461 tcccttcctg ttcggccttg gtcgcgaacc gcgcgttatg cgccgatata taagtgtcgc
     5521 gcagccaggc gttggctact tcaactgtcg tgatcccggc cagcgccagg tccttcggca
     5581 cgcgcccctg caaggtcccg aacaaacgct ccgaccgtcc ccgcgcctgg ggcgaatacg
     5641 ccgcgatatg ctcgatgctc agttgcgcca gcgctcgccc aacctgggtc ggctggtcac
     5701 gatccacctt gccgccagct tcgggtgtgt gaaagtaatg acttccgcga tcggtataaa
     5761 ggctcaacgc aaggccgtgg cgggtgaata cctccaacag cgcccggaag gtcgaagccg
     5821 tgccttcctc ctcaaccagg aacgccgagt aaatctcgct cgtggcgtcg tccatcgtca
     5881 cgatcaggtc catcgccggc tggccctcga gccacgcatg ccgcgacccg tcctggtgca
     5941 acatcatgcc cggcagcgga cgccgcggac gtttgcgccg gtgcacgccg cgccgcggcg
     6001 ccttgtccag cagacccttc gattgcagga acagcttcgt ccatgtgtag ctccaccggt
     6061 aaaggtggtc gcgcatcaga tgctcgtgga aatgttgcgc ggtgaggccc cggtagcggg
     6121 ttcgatacag acgttcgatc tccgcctcgt cgtccgccgg cacacgtttg ccggaccgac
     6181 ggcccaggcg gcggtccaac agccctgact cgccctcgtc ttcgaagcgg cggcaccagc
     6241 ggcgaaacgt ccgctcgctc acccccaaca tctcggctgc ctcgatctgg ttgagctcat
     6301 ccgcctcata ccgccccagc acactctgga acctgatcat tcgcacacct tgcaaggctt
     6361 ctgaccggcg catccgaacc ctcgaaaggg ctcggactta ccggacagat cgtgtgctac
     6421 ctaaaccgga catatcgtgt gctactgaca
//
LOCUS       DATAVD010001430         2165 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1625570, whole genome shotgun sequence.
ACCESSION   DATAVD010001430 DATAVD010000000
VERSION     DATAVD010001430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2165
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1625570"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..405
                     /locus_tag="VHX39_27445"
     CDS             <1..405
                     /locus_tag="VHX39_27445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3994928.1"
                     /translation="ILSLIGWTTLGREVRGRFLALREEDFVLAARLAGCSRMRIILRH
                     MVPTFLSHIIATSSLAIPVMIINETSLSFLGLGIRPPAISWGVLLQEAQNIQTLALAP
                     WLLIPGLVVIIAVLAFNLVGDGLRDASDPYSH"
     gene            380..1426
                     /locus_tag="VHX39_27450"
     CDS             380..1426
                     /locus_tag="VHX39_27450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3994929.1"
                     /translation="MPPIPTATDPPLLRVRDLHVSFKMDEGTVQAVDGLSFDVFPGQV
                     VGIVGESGCGKSVTMKAILQLIEPPGRIASGEILYRRDDKVIDLTRQVPRGSAMRALR
                     GAEIALIPQEPMAAFSPVHTVGEQIIEAIRLHETENGRPISRRDARARTIALFRDVGI
                     AMADQRVDAYSWQLSGGLRQRAMIAMALSCRPRLLIADEPTTAIDVTTQAQILALLRD
                     LQQKYNTAIIFITHDLGVIAQMANQVVVMYLGRVMEEGTVDEIFHSPRHPYTRALLRS
                     MPSMQGETRVALPIISGALPHPFNRPSGCPFHPRCPDAMPDRCAARVPQPREVEANRI
                     VSCFLYHDDAEAGP"
     gene            1423..>2165
                     /locus_tag="VHX39_27455"
     CDS             1423..>2165
                     /locus_tag="VHX39_27455"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3994930.1"
                     /translation="MMEATAPLLEVRGLRKYFPIAKGFFRRIAGHVRAVDDVSFTVNE
                     GETLGLVGESGCGKTTVSRCILRAIDPTEGQVLYRTRDDRIVDLAPMSRQELAPFRKE
                     IQMIFQDPFGSLNPRMTLLDNVGEPLLVNGVRSRKERTERVAELLRVVGLRPEFMHRF
                     PHAFSGGQRQRIGIARALATNPRLVVADEPVSALDVSVQAQVLNLLLELQASLRLTFL
                     FVAHDLSVIRHIADRVAVMYVGQLVELAPT"
BASE COUNT          385 a          621 c          692 g          467 t
ORIGIN      
        1 atcctgtcct tgatcggctg gaccaccctg ggccgcgaag ttcgaggccg tttcctggcc
       61 ctgcgggaag aggatttcgt tctggcggcg cgtctcgccg ggtgcagccg gatgcggatc
      121 attttgcgcc acatggtacc aacgttcctc agtcacatca ttgcgacaag ttcgctcgca
      181 ataccggtga tgatcatcaa cgaaacttcg ctgtcgtttc tggggctggg catacgaccg
      241 ccggcgatca gctggggcgt gctgctgcag gaggcacaga atatccagac tcttgcactc
      301 gccccctggc tcctcatccc tggacttgtc gtgatcattg ccgtgttggc gttcaacctt
      361 gtgggtgatg ggcttcgcga tgcctccgat ccctacagcc actgatccgc cgctgctgcg
      421 ggttcgggac ttacacgtct cgttcaaaat ggacgagggt acggtgcagg ccgtcgatgg
      481 cctcagcttc gatgtctttc cgggtcaggt ggtcggcatc gtcggcgaaa gcggttgcgg
      541 caaaagcgtc acgatgaaag cgatactgca actgatcgag ccgccaggcc ggattgccag
      601 tggggaaatc ctgtatcggc gcgacgacaa ggtcatcgac ctgacccggc aggtgccgcg
      661 cggttccgcg atgcgtgcgc tgcgtggggc cgagattgca ctcattccgc aagagccgat
      721 ggctgccttc agtccggtac acacagtcgg cgagcagatc atcgaggcca tccgtttgca
      781 tgaaaccgag aacggcaggc cgatctcacg ccgggacgca cgcgccagga cgatcgcgct
      841 gttccgtgac gtcggcatag cgatggcgga ccaacgggtc gatgcttatt cgtggcaact
      901 gtccggtggg ttgcggcagc gcgccatgat cgcgatggcg ctgtcctgcc ggccgcgcct
      961 gctgatcgcc gacgagccaa cgacggccat cgatgtgacc acgcaggcgc agatccttgc
     1021 attgcttcgg gacttgcaac aaaaatacaa cacggcgatc atctttatca cgcacgatct
     1081 tggcgtgatt gcacaaatgg cgaaccaggt cgtggtgatg tatctgggcc gggtgatgga
     1141 agagggcacg gtggatgaga ttttccatag cccgcgccat ccctacacgc gcgctctgtt
     1201 gcgatcgatg ccgagcatgc aaggcgaaac ccgggtcgca ttgccgatta tcagcggggc
     1261 cttgccgcat ccgttcaatc gcccctccgg ctgtccgttt caccctcgtt gtccggatgc
     1321 gatgccggac cgctgtgccg cgcgtgtgcc gcagcctcgc gaggtcgagg ccaatcgcat
     1381 cgtgagttgc ttcctgtatc atgatgacgc ggaagcgggg ccatgatgga ggcaacggca
     1441 ccattgctcg aggttcgcgg cctgcgcaag tactttccga ttgcaaaagg attcttccgg
     1501 cgcatcgccg gccacgtgcg cgcggtggac gatgtcagct tcacggtgaa cgagggcgag
     1561 acgcttggtc ttgtcggcga aagcggttgc gggaagacaa cggtctcacg ctgcattttg
     1621 cgggcgatcg atccgaccga ggggcaggtg ttgtatcgta cccgggatga ccgcattgtc
     1681 gacctggcac cgatgtcacg ccaggagctg gcgccatttc gcaaagaaat tcagatgatt
     1741 tttcaggatc cgttcggatc gctgaatcct cgcatgacgt tattggacaa tgtcggagag
     1801 ccgctgctgg tcaatggcgt tcgcagccga aaggagcgca cggaacgcgt cgccgaattg
     1861 cttcgggtgg tcggcctgcg gccggagttt atgcatcggt tcccgcatgc tttcagtggc
     1921 ggccaacggc aacggatcgg catcgctcgc gccttggcca ccaatccaag gttggtcgtt
     1981 gcggacgagc cggtttcggc actcgatgtg tcggtgcagg cacaggtgtt gaatttgtta
     2041 ctggaacttc aggcgtcgtt acggttgacg tttttgtttg tggcgcatga tctttcggtg
     2101 attcgtcaca tcgccgaccg ggtcgcggtc atgtatgtgg ggcagttggt cgagctggct
     2161 ccaac
//
LOCUS       DATAVD010001431         1691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1435769, whole genome shotgun sequence.
ACCESSION   DATAVD010001431 DATAVD010000000
VERSION     DATAVD010001431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1435769"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1691
                     /locus_tag="VHX39_27460"
     CDS             <1..>1691
                     /locus_tag="VHX39_27460"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3994931.1"
                     /translation="VAGTVRIADPEAGEDIQARQFAWAARLAVGDECGAVRSSFGSGT
                     PLSPAQRTVLTEARGRVHQSMAAITELLSRPGAPEVLIAAQTEALAAAQAAFKQRDAA
                     YENLGTPKQLDAVTWEKQCVSLIDPVLKVGTIGLERMALYAEENRAKALTHLAISASV
                     LVLASLGLAASLMVVRARVIRPVGQITIAIHRLAAHDIHTEVPASRRNDEFGAITTVL
                     EELRLSAVEGERLGEERESIRVANDRRQSAMDRHTQDFGRTIAGVMASLVQSAEQMRG
                     SATAMSDGAQQTRTSAAATAEGATASSRDLSSVAAASEEMSASIAEISRQVGGVTAAV
                     RQAVARATVTDKKVTGLAATADHIGEVVGLISDIASRTNLLALNATIEAARAGEAGKG
                     FAVVAGEVKALATQTAKATGEISAQVSAIRAATGEAVAAVQEVTQAIGQVDTVAVAIG
                     AAVEEQATSTREIAGSVQSVMRAAGQATQSMQQVSSIAEEGEVASRSVLTAADAVGHT
                     AEMLREEVEHFLTAMSNTNESDRRRYERIGGSGSRARLCASGYEETETAIEDISR"
BASE COUNT          330 a          495 c          610 g          256 t
ORIGIN      
        1 ggtcgccggc acggtccgca tcgcggaccc ggaggcggga gaagacatcc aggcccgcca
       61 gttcgcctgg gccgcgcgcc tcgccgtcgg tgacgaatgt ggcgcagtgc ggtcctcgtt
      121 cggcagcgga accccgttga gcccggcaca acgcacggtg ttgaccgagg cacgcggacg
      181 cgtccatcaa agcatggcgg cgataaccga attactcagc cggccgggcg cgccggaggt
      241 gctgattgca gcccagacgg aggccttggc ggctgctcaa gccgctttca agcaacgtga
      301 cgccgcgtat gaaaatctcg gcacgccgaa acagctcgat gccgtgacct gggaaaagca
      361 gtgtgtcagt ctgattgatc cggtgctgaa ggtgggcacg atcgggctgg agcggatggc
      421 gctgtacgct gaggaaaatc gcgccaaagc gctaacacat ctggccatat ccgcgagcgt
      481 gctggtgttg gccagccttg gattggcagc cagcctgatg gtggtgcgtg cgcgggtgat
      541 ccgtccggtc ggtcaaatca ccatcgcgat ccaccggctc gccgcgcatg acatccatac
      601 cgaggtcccc gcatcacggc gcaatgacga gtttggcgcc atcacaaccg tacttgagga
      661 gctgcggctc agcgcggtcg aaggcgaacg gcttggggag gaacgtgaat caattcgtgt
      721 ggcaaacgat cgacggcagt cggcgatgga ccggcacacg caggatttcg ggcggaccat
      781 agccggggtg atggccagcc tggtgcaatc ggccgagcaa atgcgcgggt ctgcgacggc
      841 gatgtcggac ggtgcacagc aaacccggac gagtgccgcg gcgactgcag agggggccac
      901 agcgtcgtcg cgtgatctca gttcggttgc tgcggcgtct gaggaaatgt cagccagtat
      961 cgccgaaatc agccgccagg tgggcggcgt cactgccgcc gtgcggcagg cggttgcgcg
     1021 ggcaactgtc accgataaga aggtgaccgg tctggccgct accgccgatc acatcgggga
     1081 agtggtcggg ctgatctccg acattgccag ccggaccaat ctgctggcgc tgaacgccac
     1141 gatcgaggcg gcccgcgcgg gcgaggcggg caagggcttt gccgtggttg ccggcgaggt
     1201 gaaggcgctg gcgacgcaaa ctgccaaagc caccggggaa atcagtgccc aggtaagcgc
     1261 cattcgggcc gccaccggtg aggctgtggc ggcggtgcag gaggtgacgc aggcgatcgg
     1321 tcaggttgat accgtcgcgg tcgcgatcgg cgctgcggtc gaggaacagg caacctcgac
     1381 gcgggagatt gccggcagcg tacaaagcgt gatgcgggcc gctgggcagg ccacgcaatc
     1441 gatgcaacag gtatcctcga tcgccgaaga aggcgaagtg gccagccgaa gcgttctgac
     1501 tgcggccgac gcggtgggac acacggcgga gatgctgcgc gaagaggtgg aacatttcct
     1561 gacagcgatg tcgaacacca acgagtcaga tcgccgccgt tatgaacgca tcggcggatc
     1621 gggaagccgt gccaggctgt gcgcgagcgg ttacgaggag accgagactg caatcgagga
     1681 catctcgcgc g
//
LOCUS       DATAVD010001432         1567 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2368326, whole genome shotgun sequence.
ACCESSION   DATAVD010001432 DATAVD010000000
VERSION     DATAVD010001432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2368326"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            459..>1567
                     /locus_tag="VHX39_27465"
     CDS             459..>1567
                     /locus_tag="VHX39_27465"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX3994932.1"
                     /translation="MDQPQPSADSIRTAVNASRDFAAGLFEQLRQDGTDTAGVTRDTY
                     GPGEQRAHITCAKVAATMGLTIERDVAANLYMTQPGLDAGEKRIVVGSHLDSVPHGGN
                     FDGAAGVVAGLVAIQALQRMGVKPKRDLTVMGIRAEESIWFQVSYIGSRAALGTLPDG
                     SLDARRIDTDRTLAEHMTDCGGDPASIIPGQRHLDPQRLHAFLELHIEQAPSLVEAGC
                     SVGIGTGIPGNFRYPDARIEGSNDHVGLPRRFRRDASLAGAEFAMAMDALWEEYDGRG
                     IPMACTIGRFHTDAKQHGLTIVPGAFHFSLDVRAYDESVLAELDQRVDAIIAGIEQRR
                     GVRFHPGNKARAAVGLVDAGIKAALSRGAAALGIKS"
BASE COUNT          302 a          478 c          488 g          299 t
ORIGIN      
        1 ccgcctccgg caccagcgac ctgggcaggc cggcctcctc gatcgaacgc cagagtgcgt
       61 cggaccagtg accggcttcg gcagttctct gggcggcggg atcgcgtagt tcctggaaca
      121 gcccggtcac ggtgtcgtgc agcatagtgc ggatggaatt atcggtttct gacataatgg
      181 ggccctggtc ttcgcttgca ccgcataacg aagggtcggc cacggcgcca gtgtcgtccc
      241 gcccattcga tgcccgtgtg atcaaccgca gggatcactg cagtcacggc agcaaaccat
      301 caggcgttta ttcatttttg cgacatctcg gtgccggtgt cggaaaatgc cgagatttgg
      361 acgctcttgc cggcgataat tgcccggcaa cgatttatcg gtgaaactgg cgaaagttca
      421 cgcaacgccg gcggccaaat acggagatgc caaacgacat ggatcagccc cagccgagtg
      481 cggacagtat tcgcactgcc gtcaacgcgt cccgcgactt cgccgccggc ctgttcgagc
      541 agcttcgcca ggatggcaca gacaccgccg gcgtgacccg cgacacgtac ggtccgggag
      601 agcagcgcgc ccacatcacc tgcgcaaaag tggcagcaac gatggggctt acgatcgaac
      661 gcgacgtcgc ggccaacctc tacatgacgc aacccggact cgatgcaggc gagaaacgga
      721 tcgtcgttgg ctcgcatctg gattctgttc cgcacggtgg caatttcgat ggcgcggccg
      781 gcgttgtcgc tggtctggtc gcgattcagg cgttgcagcg catgggcgtg aagccaaagc
      841 gtgacctgac cgtcatgggc atccgggccg aggaaagtat ttggtttcag gtttcctata
      901 tcggcagccg agccgctctt ggcacgttgc cagatggcag cctggatgcg cgacggatcg
      961 acacggatcg cactctggcc gagcacatga cggactgcgg cggcgatcct gccagtatca
     1021 tccctggcca acgccatctg gatccacaac gcctgcatgc gtttctagaa ctgcatatcg
     1081 agcaggcacc gtcattggtg gaggccggtt gctccgttgg gatcggcacc ggcattcccg
     1141 gcaactttcg ctatccggac gcgcgcatcg aaggcagcaa cgaccacgtc ggactgccgc
     1201 gacggttccg tcgcgatgcc tcactggccg gtgctgaatt cgcgatggcg atggacgcgc
     1261 tgtgggaaga atacgatggg cgaggcatcc ccatggcctg cacgatcgga cgctttcata
     1321 ccgacgcgaa gcaacatggt ctgaccattg tgcctggcgc ttttcacttc agtctggatg
     1381 tccgggctta tgacgagtcg gtgctcgcgg aactggatca gcgagtcgac gccattatcg
     1441 cgggtatcga acaacgccgc ggcgttcgtt tccatccagg taacaaagcg cgcgccgcag
     1501 tcggactggt cgatgccggc ataaaggccg cactttcgcg tggggctgcc gcactcggca
     1561 taaaatc
//
LOCUS       DATAVD010001433         4467 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1809959, whole genome shotgun sequence.
ACCESSION   DATAVD010001433 DATAVD010000000
VERSION     DATAVD010001433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4467)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4467)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4467
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1809959"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..773
                     /locus_tag="VHX39_27470"
     CDS             <1..773
                     /locus_tag="VHX39_27470"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3994933.1"
                     /translation="IRLILNEVSHAWRSLHVLDNITLTAEPGEVMVVIGPSGCGKSTL
                     LNIMGGLLAPTSGDVRTEGAVADDCLNPLTYVFQDFALLPWRSVRANVALVLQNRLPR
                     QIVAERVRNVLALTGLTDFAEAWPRELSGGMRQRVGIARALAVRPACLLMDEPLSALD
                     AQTRDLLLEEFVTLIARSGTTTVYVTHNLPEAVRLGQQIVVLSRRPGRVREIFRIDRP
                     LSGRSADDPDLLALERTLWRLIRDDAAVAERERIDAPA"
     gene            760..1551
                     /locus_tag="VHX39_27475"
     CDS             760..1551
                     /locus_tag="VHX39_27475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3994934.1"
                     /translation="MRRLDGPVPFRGGGFHPRERWIAGAATLFLIIAFWQFGTWAGFL
                     PTLFLPSPIAIAATLWRLSVTGVLWQHLSASLARLLIGWFAGTIFGMAAGIAAGLWSV
                     TRSPVMAVVAALFPIPKIALVPLFIIWFGIGEGSKIATISLGVFFPTVIATMGGVDNV
                     PRGLIRMGQSFGLPTMTIIRTIILPGATPAILNGFRVTASIAIVLLVAAEMIGADRGI
                     GAFVLSAGNLYDTDALLAGIVVLSVLGLIVAGLIGALERVLLRWR"
     gene            complement(1554..2039)
                     /locus_tag="VHX39_27480"
     CDS             complement(1554..2039)
                     /locus_tag="VHX39_27480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994935.1"
                     /translation="MALFAVLIPATAFAGPAEELSGLFLQACLSYAGHPAALRQWAAQ
                     QKLPPVPDPARAAFLNGAPGQVFDASNRTGKFALLSSDDGICAVVTDQAGDLEVAQAL
                     ERALRDAGVKFRLVIERDDKLNPKLHHREYLATKSPVAWRLLAATVHDGGRAMLTAAP
                     E"
     gene            complement(2045..2821)
                     /locus_tag="VHX39_27485"
     CDS             complement(2045..2821)
                     /locus_tag="VHX39_27485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3994936.1"
                     /translation="MTDSVPKLRLRGVRKQFGDKVVLDGIDLEVMPRTSLVVIGGSGS
                     GKSVLLKCILGLIEPDAGSIEIDGRDLMTMPRTEREAARAQIGMLFQNGALFDSLPVW
                     ENVAFGLLARHKVSRAEAPGRATEFLAQLGLAESVGVLSPAELSGGMQKRVALARAIA
                     AQPDILFFDEPTTGLDPIMGAIIDGLIVDCVKRLGSTAVAITHDMASAKRIGDRVAML
                     HRGKIIWTGSPMALMDSGNPTVDQFTHGRREGPIEMELRR"
     gene            2916..3326
                     /locus_tag="VHX39_27490"
     CDS             2916..3326
                     /locus_tag="VHX39_27490"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3994937.1"
                     /translation="MNDNVSQMQSLAHATPETAKSVSGRRSFFSYLDLGVTDGSNGAM
                     RAQVTKATQGLGEPTGWHYHVCDQQFVYMLKGWVDLEFEDGRKIRLKAGDSLMIPGGT
                     RHNETATADELELLEISVPAKMDTVACDPPAGRS"
     gene            complement(3327..4118)
                     /locus_tag="VHX39_27495"
     CDS             complement(3327..4118)
                     /locus_tag="VHX39_27495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003629138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3994938.1"
                     /translation="MNKFLSILAAVGRAVIAACRVTGQVAMFAGTGVSHIVRPPFYGR
                     LFLKALVDIGYFSLPVVALTAVFTGMVLALQSYTGFARFSAQSAVANLVVLSMTRELG
                     PVLAGLMVAGRVGAAMAAELGTMRVTDQIDALTTLSTSPMKYLVAPRLLAGTLALPLL
                     VVIADILGVMGGFIVSVLKLGFNENVYLTNTLNFVQSDDVISGLAKAAVFGFIIALMG
                     CYQGYNSRGGAQGVGAATTAAVVSASILILASDYVLTEMFFSRTS"
     gene            complement(4115..>4467)
                     /locus_tag="VHX39_27500"
     CDS             complement(4115..>4467)
                     /locus_tag="VHX39_27500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alanine racemase C-terminal domain-containing
                     protein"
                     /protein_id="HEX3994939.1"
                     /translation="RDIPTGGSVGYGATWTAQRQTRIATVGVGYADGWHRSRSNTGAA
                     YFDGHPVPLVGRVSMDLTTFDVTDLPQVQPGCWLELLGPHRPVDDAARDAGTIGYEVL
                     TALGPRYHRVYTPA"
BASE COUNT          822 a         1361 c         1392 g          892 t
ORIGIN      
        1 gcattcgact gatcctgaac gaggtcagcc atgcctggag atcgcttcat gttctggaca
       61 acatcaccct gaccgccgag cccggtgagg tcatggttgt gatcggcccc tccggttgcg
      121 gaaaatcgac acttctgaat atcatgggcg ggttattggc gccgacttcg ggcgatgtgc
      181 ggaccgaggg tgccgtcgct gacgattgcc tcaatccgct gacctacgtg ttccaggatt
      241 ttgcgctgct gccctggcgc agcgttcggg ccaatgtcgc gttggtgctg cagaaccggc
      301 tgcctcgtca gattgtagcg gagcgggtac ggaacgttct ggcgttgacc ggtttgacgg
      361 atttcgcgga ggcgtggccc agagaattgt cgggcgggat gcggcagagg gtagggattg
      421 cgagggcgct ggccgtgcgg ccggcgtgcc tgttgatgga tgaaccgctg tcggcactcg
      481 acgcgcagac ccgcgacctg ctgctggaag agtttgtcac gttgatcgcc cgttccggca
      541 cgacaacagt ctatgttacg cacaatctgc ccgaggcggt acgtctgggt cagcaaatcg
      601 tcgtgctgtc gcgccggccg gggcgggtgc gggaaatttt ccggatcgac cggccgttgt
      661 ctggacgttc cgcagacgat ccggatttgc tggcgctgga acgcacgttg tggcgcctca
      721 ttcgcgacga tgccgcggtt gccgaacggg agcgtatcga tgcgccggct tgacggcccg
      781 gtgccttttc gcggcggcgg atttcatcct cgcgagcgat ggatcgctgg cgccgccact
      841 ctctttctca tcatcgcttt ttggcaattc ggcacctggg ccggttttct gccgactttg
      901 ttcctgccat caccgatcgc gatcgcggcg actctgtggc ggctgagcgt caccggcgtt
      961 ctgtggcaac atctctcggc ttcgctggca cgtttgctga taggatggtt tgccggaacg
     1021 atcttcggca tggctgcggg cattgcagct gggctgtggt cggtgacacg atctccggtc
     1081 atggcggtcg ttgcggcctt gtttccaatc cctaaaatcg cactggtgcc gctgttcatc
     1141 atttggttcg gcatcggcga aggctcgaaa attgccacca tctcgttggg tgtcttcttc
     1201 ccaacggtga tcgcgaccat gggaggcgtc gacaatgtgc cgcgcggcct gatccgcatg
     1261 ggacagagtt tcggcctgcc cacaatgacg atcattcgca ccatcatcct gcctggcgcg
     1321 acgcctgcca ttctcaatgg gttccgcgtc acggcctcga tcgccattgt cttgttggtg
     1381 gctgccgaga tgatcggcgc cgatcgaggt attggcgcct tcgtgttatc tgccgggaat
     1441 ctttacgata ccgatgcttt gctggccggt atcgtggtgc tgtccgtgct tggtttgatc
     1501 gtcgcgggcc tgatcggcgc gttggagcgg gtgctgctgc gctggcggtg acattattcg
     1561 ggtgcggcgg tcaacattgc gcggccgccg tcgtgcacgg tcgccgccaa caaccgccat
     1621 gcaaccggtg atttcgtcgc aagatattcc cgatgatgca acttcggatt gagtttgtcg
     1681 tcccgctcga tcaccaggcg aaacttaacc ccagcatctc tcaaggctcg ctccagtgcc
     1741 tgagcaactt ccagatcgcc cgcctggtcg gtcacaaccg cgcaaatgcc gtcatcggat
     1801 gacaacagtg cgaatttccc ggtcctgttt gacgcatcga agacctgtcc cggtgcgccg
     1861 ttcaggaacg ctgcgcgtgc cggatcaggg accggtggca gtttctgctg cgctgcccat
     1921 tggcgcagtg cggccgggtg gccggcgtat gacaggcagg cctggagaaa caggccggac
     1981 aattcctcgg ccggtcccgc gaatgcggta gccgggatca gcactgcaaa aagagccaac
     2041 cactttatcg gcgcaactcc atttcgatcg gcccctcgcg cctgccgtgg gtgaactgat
     2101 caacggtcgg attaccgctg tccatcaacg ccatcggcga accggtccag atgatcttgc
     2161 ctcggtggag cattgccacc cggtcgccaa ttcgtttcgc gcttgccatg tcatgggtaa
     2221 tcgcgaccgc ggttgagcca agccgtttca cgcagtcgac gattaatcca tcgatgatcg
     2281 cacccatgat cggatccagg ccagtcgtcg gctcatcgaa aaacaagata tccggttggg
     2341 cggcaatcgc tcgcgccaat gccacgcgct tctgcatccc acccgacaac tccgccggtg
     2401 acaaaacgcc cacgctttca gccagcccca actgggccag gaactcggtg gctcgccccg
     2461 gtgcctccgc tcggctgacc ttgtggcggg cgagcaaccc aaaggccacg ttttcccaaa
     2521 ccgggaggct gtcgaacaga gcgccgttct ggaacagcat cccgatttgc gctcgtgctg
     2581 cttctcgttc cgtgcgtggc atggtcatca ggtcgcggcc gtcgatctcg atcgagccgg
     2641 catcgggttc gatcaggccc aggatgcatt tcagcagcac cgacttgccg gagccggaac
     2701 cgccgatcac caccagcgat gtgcgcggca taacctccag gtcgatgccg tccagcacca
     2761 ccttgtcgcc aaattgtttg cggactccgc gcaggcgaag tttgggcacg gagtcggtca
     2821 tgtcgcccta gatgccagtg tgctgcggga ccggcaatgg tttacctccg gcctgaacag
     2881 tgatctgatc atccgacgca aaagaggacc gtcccatgaa cgataatgtc agccaaatgc
     2941 agagcctcgc ccatgccacg ccggagactg caaagtcggt ttcgggccgc cgttcgttct
     3001 tttcctacct cgatcttggc gtcaccgatg gctcgaatgg tgcgatgcgc gcccaggtga
     3061 cgaaggctac gcaggggttg ggagagccga cggggtggca ctaccacgtg tgcgatcagc
     3121 agtttgtcta catgctgaag ggctgggtcg acctggaatt cgaagacggc cgcaagatcc
     3181 gcctcaaggc cggcgattcg ctgatgattc cgggcggcac gcggcacaac gaaaccgcca
     3241 cggcggatga actggaactg ctggaaatct cggtgccggc gaaaatggac acggtggcct
     3301 gcgatccgcc ggccggccgt agctgattac gacgtgcggc tgaagaacat ctcggtcagt
     3361 acgtagtcgg acgcaaggat caggatggag gcgctgacca ctgcggctgt ggtggcggcg
     3421 ccgacaccct gcgcaccgcc tcggctgtta tagccctggt agcagcccat cagcgcaatg
     3481 atgaagccaa ataccgcggc cttggcgagg cctgaaatca catcatcgga ctgcacgaaa
     3541 ttgagcgtgt tggtcaggta gacgttctcg ttgaagccta gtttcagcac tgaaacaatg
     3601 aaaccgccca tgacgccaag aatatcggcg atcaccacca gcagcggcaa agcgagggtg
     3661 cccgccagca ggcgaggcgc gacgaggtat ttcattggac tggtcgacaa ggttgtcaac
     3721 gcatcaatct gatcggtgac gcgcatggtg ccaagctcgg ctgccattgc cgcaccgacc
     3781 cggccggcga ccatcagtcc cgcaagcacc ggtcccagtt ctctggtcat cgacagcacg
     3841 acgaggttgg cgacggcgct ttgcgcgctg aaccgggcga aacccgtgta ggactgcagc
     3901 gccagcacca taccggtgaa cacagcggtc agcgccacca cgggcaggct gaaatagccg
     3961 atatccacaa gtgctttcag aaacagccga ccgtaaaacg gcggccgcac gatgtgcgac
     4021 acgccggtgc cggcgaacat tgcaacctgg ccggtcacac ggcacgcggc gatgaccgcg
     4081 cggccaaccg cggcgagaat tgacagaaat ttgttcacgc cggcgtgtag acccgatgat
     4141 accggggacc gagagcggtc agcacctcgt agccaatcgt acccgcatcg cgcgccgcgt
     4201 catccacggg acgatgcggt ccgagtaatt ccaaccagca gcctggctga acctgcggaa
     4261 ggtcggtcac gtcgaaggtg gtcaggtcca tggagacacg gcctaccagt ggaacggggt
     4321 ggccgtcaaa atacgccgca cccgtgttgg agcggctacg atgccagcca tcggcgtaac
     4381 cgactcctac ggtcgcaatg cgtgtctggc gttgggcggt ccaggtggca ccgtacccaa
     4441 cgcttccacc ggttgggatg tctcgca
//
LOCUS       DATAVD010001434         3283 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2559656, whole genome shotgun sequence.
ACCESSION   DATAVD010001434 DATAVD010000000
VERSION     DATAVD010001434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3283
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2559656"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..308)
                     /locus_tag="VHX39_27505"
     CDS             complement(<1..308)
                     /locus_tag="VHX39_27505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994940.1"
                     /translation="MTIVQSGFPLALSMPFLLATWIAFVDRRRSAVSHDDGTRPTAAT
                     GNISPAKAGPGVAFVDLEAALCEAVVAVESVACRRWVRIELALGVSMAVPVDPRALRT
                     A"
     gene            490..1272
                     /locus_tag="VHX39_27510"
     CDS             490..1272
                     /locus_tag="VHX39_27510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3994941.1"
                     /translation="MSPPPSNAIEVHGLTKRYGDVLAVDGIDFAASSGATLGLLGGNG
                     AGKTTTIAMLLGLLLPTSGSIRVLGHDMLHDRFAALARMNFSSPYVSLPQRLTVRENL
                     RVYGHLYNVRGIEKRIAELATELDLGALLDRPAGQLSAGQKTRVALAKSLINRPELLL
                     LDEPTASLDPDTGDLVRSWLERYRADTGCTILLASHNMAEVERLCSHVLMLKQGRVVD
                     QGAPQDLLDRYGRDDLEEVFLDIARDRRTARGSGVQPDAVPA"
     gene            1295..2095
                     /locus_tag="VHX39_27515"
     CDS             1295..2095
                     /locus_tag="VHX39_27515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3994942.1"
                     /translation="MTGAPRRIWGMMYRHLALFRRSWPRLLELAYWPILGMCIWGFTA
                     SFLTRRLGAGAAVTVSALLGGVLLWEVCVRSQMGMTISFLEELWSRNLGHVFVSPLRP
                     WELVAALIGMSCIRMLLGVVPAVALAWLLYAFNLFLLGPVLLLFFINLMVMGWWIALA
                     VVSLILRHGAGAEPLAWSVLFGLAPFSAVFYPVSVLPASLRPIALALPSAHVFEGMRG
                     VLLDGVIQWHHLLWAFGLNGMWLSLATLLFAWQFHEARVRGALLSIGE"
     gene            2092..2712
                     /locus_tag="VHX39_27520"
     CDS             2092..2712
                     /locus_tag="VHX39_27520"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEX3994943.1"
                     /translation="MTETRFWLIRHALVDENSRAILYGVMDVPLCETTLEAQAPMYSA
                     LANRLPRPATWKVTPLSRTRRTAQAIFNAGYPTEVLGVEPDLIEQSLGEWQGLPHAEL
                     PAKLAAPQHPFWPLAGDEKPPGGESMVEVIVRAGVALERLAQTHRGEDVVIVSHGGTI
                     RAAVAYALDVHPDNALHLSIHNLSLTALERHPEGWRVTRVNELPGY"
     gene            complement(2739..3209)
                     /locus_tag="VHX39_27525"
     CDS             complement(2739..3209)
                     /locus_tag="VHX39_27525"
                     /inference="COORDINATES: protein motif:HMM:NF017319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3994944.1"
                     /translation="MNGAQSAAQKRQAITQILEGAVDVNGIAQFCLGRFWRIASADQQ
                     KRFIAAFHQVLVTNISSKLGDYTGVKLAVQRGRQQDDQAIVTTQVERPNNPPTTVDWV
                     IEAPATAPKIVDVIAEGTSLRLTQRQDYASYLSRNNNDINALISAMGQQTAKSG"
BASE COUNT          550 a         1054 c          995 g          684 t
ORIGIN      
        1 gcggtccgta atgcgcgcgg atccaccggc acagccatcg acaccccaag tgccagctcg
       61 atccgaaccc accgccgaca cgcaacagat tccacggcga ccacggcttc gcataacgca
      121 gcttcgaggt cgacgaaggc gacgccagga ccggctttgg ctggactgat gttgccagtt
      181 gcagccgtcg ggcgtgtccc gtcgtcgtgg ctgaccgcag agcgacgccg gtccacgaac
      241 gcaatccagg tggccaatag gaacggcatc gacagcgcca gaggaaaccc ggattgaacg
      301 atggtcatga gcccgcgcct cctaagcgcc tgccgcggag catgccgtga acacatgaac
      361 agatgattaa tggccgatcc tgccttgctc gtggcccgtt acgtgcgcct cgttcccctc
      421 actgtgcgcc ggtcaggtct gcgcccgtcc cgtttccgcc caacaggaaa tcgtctaacc
      481 gtgccgccca tgagcccacc cccgagcaac gccatcgagg tccacggact gaccaagcgc
      541 tacggcgacg ttctcgcggt tgacgggatc gacttcgccg cctcctccgg cgcaaccctg
      601 ggccttttgg gtggcaatgg cgccggaaaa accacgacca tcgcaatgtt gcttggtttg
      661 ctgttgccga cgtcgggatc aattcgcgtc ctcggccacg atatgctgca tgaccggttc
      721 gcagcgttgg ccaggatgaa tttctcgtcg ccttacgttt cactaccgca gcggttgacc
      781 gtgcgagaaa acctgcgtgt ctatggccat ctgtataacg tccgcggcat cgaaaagcgc
      841 atcgccgaac tggcgacgga acttgacctt ggcgcattgc tcgaccggcc tgcgggtcag
      901 ctatccgccg gtcagaaaac ccgtgtcgcg cttgcgaaat ccctgatcaa tcggccggaa
      961 cttctgctgc tcgatgagcc gaccgccagc ctggatccgg acaccggcga cctggtccgc
     1021 agctggctcg agcgttaccg ggccgacacc ggctgcacca tcctgctcgc cagccacaac
     1081 atggccgaag tcgagcgcct atgttctcac gtccttatgc ttaaacaggg tcgcgtggtg
     1141 gatcagggcg ctccgcagga cctgctggac cgttacggcc gggatgacct ggaagaggtg
     1201 ttcctcgaca tcgcccgcga ccgccgtacc gccagaggat ccggcgtgca gccggacgcg
     1261 gtgccggcat gacaccgccc tcggaaattc ggtcgtgacg ggcgcgccac gccgtatctg
     1321 ggggatgatg tatcgtcacc tcgcgctgtt ccggcggtcc tggccacgcc tgttggagct
     1381 cgcctactgg ccgatactgg gcatgtgcat ctgggggttt accgcgtcat tcctgacacg
     1441 gcgcctgggt gctggcgccg cagtcaccgt ctcagcactg ttgggcggcg tcctgctttg
     1501 ggaggtttgc gtgcgtagcc agatgggcat gacgatctcc ttcctggagg agttgtggtc
     1561 gcgcaatctg ggccatgtct ttgtcagccc gctgcgtccg tgggagctgg tggctgcact
     1621 gatcggcatg tcctgcattc gcatgctgct cggcgtcgtg ccggcagtgg ctctggcgtg
     1681 gttattgtat gctttcaacc tgttcctgct gggaccggtt ctgctgctgt tcttcatcaa
     1741 cctgatggtc atgggctggt ggatcgccct tgccgtcgtc agcctgatcc tgcgtcatgg
     1801 cgccggcgcc gagcccttgg catggtcggt cctgtttggc ctcgccccgt tctccgctgt
     1861 gttctatcca gtcagcgtac tgcccgcctc cttgcggcct attgcgctgg cattgccatc
     1921 tgcgcacgtt ttcgaaggga tgcgcggggt cctgttggac ggcgtgatcc agtggcatca
     1981 cctgctttgg gcgtttggcc tgaacgggat gtggctgagc ctggcgacgc tgctgttcgc
     2041 ctggcagttc cacgaggcgc gggtgcgtgg cgcgctattg agtattggcg aatgaccgaa
     2101 acccgatttt ggctgatccg ccacgcgctc gtcgacgaga actcccgcgc catcctgtac
     2161 ggcgtgatgg acgttccgct gtgtgagacc acgttggaag cccaggcccc gatgtattca
     2221 gcgttggcca atcgtttgcc acgaccggcg acgtggaaag tcacgccgct gtcgcgcacg
     2281 cggcgcaccg cccaggctat cttcaatgcc gggtatccga ccgaggtact gggcgtcgag
     2341 cccgatttga tcgaacaatc ccttggcgaa tggcaaggcc tgccgcacgc cgaactcccc
     2401 gcgaagctgg cagccccaca acatccattc tggccactgg ccggcgacga gaagccaccc
     2461 ggtggcgaga gcatggtcga ggtcattgtc cgagccggcg tcgctctgga acgattggcc
     2521 caaacccatc ggggtgagga tgtcgtaatc gtcagccatg gtggcacgat ccgcgccgca
     2581 gtcgcctacg ctttggatgt gcatccggac aatgcgttgc atttgtcgat ccacaacctg
     2641 tcgctaaccg ctcttgaacg gcacccggag ggttggcggg tgacccgcgt caacgaattg
     2701 cctggttact aaccgatcaa gcgcacaacg attggaaact acccgctctt tgcggtctgc
     2761 tgacccatcg cactgatcaa cgcgttgata tcattgttgt tgcggctcag ataagacgca
     2821 tagtcctgcc gttgggtgag ccgcaacgag gtcccctcgg cgatcacgtc gacgattttc
     2881 ggtgctgtgg ccggcgcttc gatcacccag tcgaccgtgg tcgggggatt gttcggccgc
     2941 tcaacctgcg tcgtcacaat cgcctgatca tcttgctgcc gtccccgctg cacagccagc
     3001 ttcacgcccg tgtaatcgcc taatttcgac gagatgttcg tcaccaggac ctgatggaac
     3061 gcggcgataa accgtttctg ctggtcggca gaggcgatcc gccaaaatcg cccaaggcaa
     3121 aactgcgcga tcccatttac gtccacggcg ccctcgagga tttgtgtgat cgcctggcgc
     3181 ttctgcgccg cagactgtgc gccgttcacg atgccgacca gttggttccc tatctgctgg
     3241 acgaaagccg tcgctttttc aacgacttgc gcctgagcgt gcg
//
LOCUS       DATAVD010001435         2192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2368705, whole genome shotgun sequence.
ACCESSION   DATAVD010001435 DATAVD010000000
VERSION     DATAVD010001435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2368705"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2051)
                     /locus_tag="VHX39_27530"
     CDS             complement(<1..2051)
                     /locus_tag="VHX39_27530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3994945.1"
                     /translation="MSLSAPFIARPIATWLLALAILLSGGLGYHWLPVSALPEVDFPT
                     IQVVTQLPGAGPETVETLITASLERQFGQIPGLVTMTSQSAEGTSQITLQFQLGRSMD
                     SAAQDVQAAINAAAGTLPAGLPYPPTYSKVNPADAPILTMALTSDTRPVDVISDAADT
                     MLQPKLSEIDGVGRVTVQGTMRPAVRIRVDPARLAAYGLSMEDVRTAITAANVNGAKG
                     GFDGPRLAFSLGANDQLENAAAYRDLVIAWRSSASLGSATPSFGSSAQSLTGIAGSPA
                     MSGAGTSNGAPVRLSAIGTVVAGVENARVSATYDGRPAVVLDVQRQPGANIVQTVEAV
                     KQELPRLRRAMPSGIRLTIVSDRTETIRASVRDVQFTLILSVVLVVGVIFVFLRSLRA
                     TIIPAIALPLSLIGTFGVMDLLGFGVDNLSLMALTVASGFVVDDAIVMIENVMRYIEL
                     GMRPLEAAFRGAAQIGFTIVSLTVSLIAVFIPLLFMTGVVGRLFNEFAVTLSVSVIVS
                     AVISLTLTPMMCGRLLRPAAEEHPTWFARWMERGFERLLAGYRRSLDWSFGHQPFVLM
                     VGAATLVGTTWMYIVVPKGFLPRQDTGVLVAVTEAAQSISIPKLDRLQTAMARIVRQD
                     PAVTGVVSFVGAGTINATPNTGRLTIALKSPDHRDPADVVIARLQHAVSGIPGLVAYI
                     QP"
BASE COUNT          439 a          722 c          688 g          343 t
ORIGIN      
        1 ggttgaatgt aggcaaccaa ccccggaatg cccgacaccg cgtgctgcaa ccgggcgatg
       61 accacgtcgg ccgggtctcg gtggtcgggt gatttcagtg cgatcgtcag ccggccggtg
      121 ttgggcgtgg cgttgatcgt cccggcgccg acaaaagata ccacgccggt gacggcagga
      181 tcctgacgca cgatccgcgc catcgcggtc tgcaacctgt caagtttcgg gatcgatatg
      241 ctttgcgccg cttccgtcac cgcgaccagc acaccggtat cctgacgtgg caggaacccc
      301 ttcgggacca cgatatacat ccaggtggtg ccgaccagcg tcgcggcacc gaccatcaga
      361 acgaaaggtt gatggccaaa cgaccaatcg agggaacgcc ggtaccccgc cagcagccgt
      421 tcaaatccgc gttccatcca acgggcaaac caggtcggat gttcctccgc cgccggacgc
      481 agcagccggc cgcacatcat cggcgtcaga gtcagcgaga ttaccgcgga cacaattacc
      541 gataccgaca acgtcacggc aaattcgttg aataaccgcc cgaccacgcc ggtcatgaac
      601 agcagcggaa tgaacaccgc aatcagcgac accgtcagcg agacgatggt gaagccaatt
      661 tgcgcggcac cgcgaaacgc ggcctccagc ggccgcatgc cgagttcgat gtaacgcatc
      721 acgttctcga tcatcacgat cgcgtcgtcg acgacgaagc cgctggcgac ggtcagtgcc
      781 atcagcgaca gattgtcgac gccaaagccc aacagatcca tgacgccgaa tgtgccgatt
      841 aacgacaagg gtagcgcaat cgcagggatg atggtggcgc gcaacgaccg caggaagacg
      901 aagatcacgc cgacaaccaa tacgaccgac aggatcaagg tgaactgcac gtcgcgaacc
      961 gaggcgcgga tcgtctccgt ccggtcgctc acaattgtca gccgtattcc actgggcatg
     1021 gcgcgccgca gcctgggcag ttcctgcttc acggcctcga ccgtttgcac gatgttggcg
     1081 ccgggttgcc gttggacgtc gagaacgacc gccggcctgc cgtcataggt cgcggagacc
     1141 cgcgcattct ccactccggc aaccacggtg ccgatggccg aaagtcgcac cggggcgccg
     1201 ttgctcgtcc cggcccccga catcgcgggt gaacccgcaa tcccggtcaa tgattgcgcg
     1261 gacgaaccga agctgggcgt ggccgatccc agtgaggcgc tgctgcgcca cgcgatcacc
     1321 aggtcccgat aggcggcggc gttctcgagc tgatcgttgg cgcccagaga aaacgccagc
     1381 cgcgggccat cgaagccgcc ctttgcgccg ttgacgttgg cggcggtgat ggcggtgcga
     1441 acatcctcca tcgagaggcc gtaagcggcc agccgcgccg ggtcgaccct gatccgtacg
     1501 gccggccgca tggtgccctg caccgtcacc cggccgacgc catcgatctc ggatagtttc
     1561 ggctgcaaca tggtgtcggc agcatccgat atcacgtcca ccggccgcgt gtccgaggtc
     1621 agcgccatcg tcaggatcgg cgcatccgcc gggttcacct tggagtaggt cggcggatac
     1681 ggcagacccg ccggcaacgt gcccgccgcg gcattgatcg ccgcctgcac gtcctgcgct
     1741 gccgagtcca tcgaccggcc aagttgaaat tgcagcgtga tctggctggt gccctcggca
     1801 ctctgcgagg tcatggtcac caaaccaggg atttgcccga actgccgctc cagcgaggcg
     1861 gtgatcagcg tctcgaccgt ctctggcccg gcgccaggta attgagtgac cacctggatg
     1921 gttgggaaat ctacctccgg caacgccgac accgggagcc agtgatagcc gagaccgccg
     1981 gacaacaaga tggccagcgc cagcagccag gtcgcaatcg gccgcgcgat gaacggggcg
     2041 gagaggctca tcgggggaag tatcggggcg ttgccccgga cctcatcagg ggcgctgccc
     2101 ctgaaccccg ccaagggcag cggcccttgg aaccattcat tttggttggg gaatgggaga
     2161 gggccgacac agacctggat acgacaccgt cg
//
LOCUS       DATAVD010001436         2512 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1626082, whole genome shotgun sequence.
ACCESSION   DATAVD010001436 DATAVD010000000
VERSION     DATAVD010001436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1626082"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..549)
                     /locus_tag="VHX39_27535"
     CDS             complement(<1..549)
                     /locus_tag="VHX39_27535"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEX3994946.1"
                     /translation="MDTGNPARPIDRNHGHGSQGREHQRHDHDGHVHHTHTHHGHDHH
                     SPGEHDLAFAIGAGINLAFALGEIGFGFAANSVALIADAVHNLGDVLGLLLGWMAVWL
                     HRRPPTPHRTYGWGRFSIMVALGNAAILLVSVGGIGIEAMHRMHTPAPVASGTVMLVA
                     AIGILVNGGSALLFLRGRHADLN"
     gene            627..1457
                     /locus_tag="VHX39_27540"
     CDS             627..1457
                     /locus_tag="VHX39_27540"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011251627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEX3994947.1"
                     /translation="MDLLQASLIAILQGATELFPVSSLGHAVIVPALIRSGINQLSPE
                     FLPFLVFLHLGTAVALLSFFWRDWWTLSLGVLGISQRMVVLESRQVFLKIVVATIPAV
                     IVGFVLEKFVRGLFGTPVIAAVFLVVNGLLLVFGERLRNRGHRELSTLTMLDALYIGL
                     WQCTALIPGISRSGATIVGGVLRGITHEGAAHFSFLIATPIILGATVLEVPKLLHEQV
                     PAGTFPIAALAAVVAGITAWLSTCFLMRYFRNHDDWALGPFAAYCVVAGLGSLAILIL
                     "
     gene            complement(1483..2385)
                     /locus_tag="VHX39_27545"
     CDS             complement(1483..2385)
                     /locus_tag="VHX39_27545"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEX3994948.1"
                     /translation="MQNDLSIPHGIWLPLITPFRDDKLDQTSLRRLIRHYATEPIDGL
                     ILGATTGEGLTLDDAELGCLVDVTRAELATIGRVLPLYLGLSGSDTGKLARSLHRGAD
                     WPVDGYLIACPYYTRPSQDGLFQHFSFLAQSTPRPILIYNIPYRTGVNLGNETMLQLA
                     EHGNIVGVKDCCADLAQSFDLIRSSPPGFAVLTGEDALFYSALALGADGGVLASAHVD
                     TAAFAMIRTRLLHGDQPGALAAWRTLVDLPRLLFTEPSPAPIKHYLWRTGLIDSPELR
                     LPMTPVSSVLAARIDRDIARERQP"
BASE COUNT          469 a          751 c          775 g          517 t
ORIGIN      
        1 gttcagatct gcgtgacgtc cgcgcagaaa caggagcgca gaaccgccat tgaccaggat
       61 accgatcgcc gcaacgagca tcacagtacc cgaggcaacc ggtgccgggg tgtgcatccg
      121 gtgcatcgcc tcgatcccga tcccgccaac ggaaacgagg agaatcgctg cattgcccag
      181 agccaccatg atggagaacc gaccccagcc gtacgttcgg tgcggcgtcg gaggccggcg
      241 atgcagccac accgccatcc agccgagaag caaaccgagc acatcgccca gattgtgaac
      301 cgcgtccgcg atcaacgcga ccgagttggc ggcgaaccca aagccgattt cacccagggc
      361 aaacgccaga ttgatcccgg cgccgatcgc aaatgccaga tcgtgttcac ccggactgtg
      421 atggtcgtgt ccgtgatgcg tgtgggtatg gtgtacatgt ccatcatgat cgtggcgttg
      481 atgctccctg ccctgggagc catgcccatg attgcggtcg atcggtcgag cagggttgcc
      541 tgtgtccatc gtccccggtc tatgccacga agcgacccgg taagcctatt gcgcctacga
      601 gtctcccgac gaaacggaac tgtcatatgg atttgcttca ggcgagtttg atcgcgatcc
      661 tgcagggagc caccgagctg ttcccggtca gcagcctcgg ccatgcggtg atcgtgccgg
      721 cactgatacg ctcgggtatt aaccagcttt cgccggaatt cctgccattt cttgtgtttc
      781 tgcatttggg caccgcggtc gcgttgctca gctttttctg gcgcgattgg tggacactgt
      841 ctctgggcgt cctcggcata tcacagcgaa tggtggtcct ggaaagccgg caggtcttcc
      901 tgaagatcgt cgttgccacc attcccgctg taattgtggg gttcgtgctg gaaaaatttg
      961 tccgcggcct gttcggcacg cctgtcatcg ccgccgtctt tctcgtggtg aacggcctgt
     1021 tgctggtgtt cggcgagcgg ttgcgcaacc gcggccaccg cgaactctcg accctgacga
     1081 tgctggacgc gttgtacatt ggcttgtggc aatgcacggc gctgattcca ggcatctccc
     1141 gctcgggcgc cacgatcgtc ggcggcgtat tgcgcggtat cacgcatgag ggcgcggcgc
     1201 atttttcctt tctgatcgcg accccgatca tcctcggcgc gaccgtgctg gaggtgccaa
     1261 aactgctgca cgaacaggtg ccggccggaa cgtttcccat agcggcgttg gccgcggtgg
     1321 tggcgggcat cacggcctgg ctcagcacct gtttcctcat gcgctacttc cgcaaccatg
     1381 acgactgggc tttgggtccg ttcgccgctt attgcgtggt ggccggtctg ggcagtctgg
     1441 cgattcttat tctttgattt cagtccattg gagcgagttc ctctagggct gccgttcccg
     1501 cgcgatgtcc cggtctattc gggcggccag cacggagctg accggtgtca tgggcaggcg
     1561 cagttccgga ctgtcgatca aacccgtgcg ccacagataa tgcttaattg gtgccggact
     1621 tggttcggta aacaacagcc gcggcaaatc gaccagtgtg cgccacgcgg ccaaagcgcc
     1681 cggctgatcg ccgtgcagca accgcgtgcg gatcatcgcg aatgcggctg tatcgacatg
     1741 agctgaggca agaacgccgc cgtcggcacc cagagcgaga gcggagtaga agagcgcgtc
     1801 ctcgccggtg aggacggcga aaccgggcgg gctggaacgg atcaaatcga aggattgcgc
     1861 gaggtcggcg cagcagtcct tgaccccgac gatgttgcca tgttcggcca attgcaacat
     1921 cgtttcgttg ccgaggttca ccccggttcg atacggaatg ttgtagatca ggatgggtcg
     1981 tggcgtgctc tgggccagga acgagaaatg ctggaacaga ccatcctgcg acggccgcgt
     2041 gtaatacgga caggcaatca gataaccatc gaccggccag tccgccccgc gatgcaacga
     2101 tctggcaagc ttacctgtgt cgctgccgga caacccgagg taaagcggca gcaccctgcc
     2161 aatcgttgca agttccgccc gggtcacgtc cacaagacat cccagctcgg cgtcgtccaa
     2221 tgtcaggcct tctccggtcg tcgctccgag tatcagtcca tcgattggtt ccgttgcgta
     2281 atgccggatc aggcggcgca gtgaggtttg gtcgagtttg tcatcccgaa acggcgtgat
     2341 gagcggcaac caaatgccat gcggtatcga caggtcgttt tgcatgaatt gtatccctct
     2401 cctggatggc cggcgacggg agtggataca aaaaaacccc gtccaaaccg gcggggttgt
     2461 gattgatcgt gaggcgctat ggcttacgac gcgcgaagat caacggtgcc cc
//
LOCUS       DATAVD010001437         5556 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1810306, whole genome shotgun sequence.
ACCESSION   DATAVD010001437 DATAVD010000000
VERSION     DATAVD010001437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5556
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1810306"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..352)
                     /locus_tag="VHX39_27550"
                     /pseudo
     CDS             complement(1..352)
                     /locus_tag="VHX39_27550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492708.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
     gene            1202..1735
                     /locus_tag="VHX39_27555"
     CDS             1202..1735
                     /locus_tag="VHX39_27555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEX3994949.1"
                     /translation="MIHGYMISSSDSQKVAAQLKAAGCDKVHRDVRGNARSERVQRRR
                     AVEQLGAGDTLVVARLNQIADSTLDLLRTLTDITERKATFRSLAEPWADSNQRSVRLL
                     TLLEGIAAFERDVRSARTEAGQARAVARGVKLGRKPKLTPKQEQEALRRRKRGETLAT
                     IAETYNVSHSTISRLVA"
     gene            complement(2027..3211)
                     /gene="rnd"
                     /locus_tag="VHX39_27560"
     CDS             complement(2027..3211)
                     /gene="rnd"
                     /locus_tag="VHX39_27560"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016891 - RNA endonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HEX3994950.1"
                     /translation="MPRHPIPEFPPPTVVTDTDGLAALCHRLANENFVTVDTEFMRER
                     TYYPELCLVQLAGETEVAIVDTVSDRLDLSPLGDLLADPAVTKVFHAARQDVEIFVHR
                     FDAVPTPLFDTQVAAMVAGFGDQVGYDALVSNLTGGSIDKAHRFSDWAARPLSPAQMT
                     YAAADVTWLRAVYRRLRDRLVEEGRLSWVAEEMAILTNPGTYRTDPETAWERLKVRGN
                     NRRFLALVRSLAAWREQEAQRINIPRQRLLKDETLMEIAAIAPTNAEALSRARGITRG
                     FAEGRTGASLLEAAAATIALPEADLPTAPRQRETARPSAALVQLLKVLLTARCEENQV
                     APKLIASSDDIDRIASEDAPDVPALHGWRRAVFGEDAVALREGRVALGVDGRRIQLIP
                     VA"
     gene            3442..5226
                     /gene="aspS"
                     /locus_tag="VHX39_27565"
     CDS             3442..5226
                     /gene="aspS"
                     /locus_tag="VHX39_27565"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014106426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEX3994951.1"
                     /translation="MHPYRSHTCGALRAADAGQTARLSGWVHAKRDHGGLLFIDLRDH
                     YGITQCVFATGSAVFEQAEAVRPESVITVTGAVVVREEGTVNPKLPTGEMELRVADLA
                     VQSAAEVLPMQVAGEEKFPEDIRLRYRFIDLRRDKLHRNMMLRSNVITSIRRRMIEAG
                     FLEYQTPILTASSPEGARDFLVPARLHPGKFYALPQAPQQFKQLLMVAGFDRYFQIAP
                     CFRDEASRADRSPGEFYQLDFEMSYVTQDDVFATIEPVVGGVFEEFSEGRAVTPAPWP
                     QIPYSTAMLEYGSDKPDLRNPLRIADVTAHYAGSGFGLFARIAATGGIVRAVPAPGAA
                     AQPRSFFDRLNEWARAEGQGGLGYIVYDADGPKGPIARNLEPERAEAIRSACGLNAGD
                     AVFFVAGKQDVAEKFAGVVRNRIAEELDLSEKGAFRFCWITDFPMFEINEETKQIDFS
                     HNPFSMPQGGLEALNTQDPLTIKAWQYDVVCNGIELSSGAIRNHRPEIMLKAFAIAGY
                     KAEEVEARFGGMLNAFRFGAPPHGGSAPGIDRIVMMLADEPNIREVILFPLTQQGEDL
                     LMGAPAEVTPARLKELSLRIDLPPKPVR"
BASE COUNT         1008 a         1698 c         1792 g         1058 t
ORIGIN      
        1 gggtctgatc tggatgcacc gtcagcgggt tcaccaccat cccggactca tatttcttga
       61 cctggcgcac gttggcggcc tgctgctcgg gcgtcagatt cttatggatc acccccatcc
      121 cccccaactg ggccatcgca attgccatgg cgctttcggt gacggtgtcc atcgccgctg
      181 aaatcagggg aatattcagc cagatgccgc gcgtcagtcg ggtccgtgta ttggtcgcac
      241 ccggcagaac ctgagactac gccggcacga ccagcacgtc gtcgaaggcc aaagcctcct
      301 ccacccggct ggtgacgagg gttcgatgtt cgttgggagt gtcaagtgcc atggacatgt
      361 ggcctttccg cgaccttgac ggcccctcat aagagcgcac ggcgggttcc gcaagcgttt
      421 ggttatgacg tttcgtgtgg ctgcaggcag gcccgcttca accggaccga ccggatcgtg
      481 ttcccctcat aggttggacg agccgtctca aaccggacgc ggcgccgctt cttctgcgtg
      541 ggctcaacac agatgtatgc aaaatctccg ggtagggctt tgttcacggc gtgcgttttt
      601 catggtttgt tcacgtccat cgccggattt aacgaccctg gttgtgtcgc cgctgcggag
      661 tgtcggtccg acatgcggca cacagcgagt tcgccaaatg cgcgatttcc gcgcgcggct
      721 tcgataccgg cgcatgatgt tcacgcaaaa ctgtgccaat atgacgagga tgggtggctg
      781 gctgcgaccg accggatgtt gccgcggacc ggcggggccg gggcctggac acaagaatta
      841 atattgagtt tcgaaccggc tgaggcttcc ggccggagcg gcgcttcgac gcagcaatag
      901 ccatgaaaaa gccgtgaatc cgcagaaatc tcgttcattg caccagctga gctggtatgg
      961 tgcttgtata ctccgcacgc taccccagat atccggcctc gtggtgcgga ttgcacggct
     1021 catgcagctg ccgcgattcc ggaaaattcc gattcgctac cgcaaagcgg actgaaaccg
     1081 gcccgttatg agtacgttgt aagtgcgaat gtattgactt cgctggcgcg gtcgcgtcat
     1141 ttggagttga tatcctcatc aatcggccga ttcccgaatc ggccagacat ggaatggcac
     1201 aatgatccac ggctacatga tctcctcctc cgatagccag aaggttgcag cgcaactcaa
     1261 agccgccggt tgcgacaaag tccatcgcga tgtgcgcggc aatgccaggt cggagcgcgt
     1321 gcagaggcgg cgtgcggtcg agcagctcgg tgccggcgac acgctggtgg tcgcacggct
     1381 gaatcagatc gccgactcga cgctggatct gttgcgcacg ctaactgaca taaccgagcg
     1441 caaggcgacc ttccggtcgc tcgccgagcc atgggcggac agcaaccaac gcagtgtgcg
     1501 gttgctgaca ttgctggaag gcattgcggc gttcgaacgc gatgtgcgca gcgcacggac
     1561 cgaggccggt caggcgaggg cggtggcacg tggggtgaag cttggccgca aaccgaaact
     1621 gacaccgaag caggagcagg aggcgctgcg ccggcgcaaa cggggtgaga ctctggcaac
     1681 gattgccgag acttataacg tcagccacag cacgatctcg cgcctcgtcg cctgaggttt
     1741 tgtccgcgct ctgagaggac tgcatcggcg gaacgatcga gcggtcctcg agctgtactt
     1801 ctcgtcatcc gaccgcgtca tcctcgggct cgtcccgagg acctgatgcg gtacgtatcc
     1861 tgtcaattga gatcgatcgt tgtgccgaaa cggatgctcg ggtcgagccc gagcatgacg
     1921 tgcaagcgac gagctgcatg acgtgcgcgc cacgggcacg gcctccggcg acggttgcgg
     1981 tgacggatgt gacgctgcga ttccccggtc ccggataaaa agtgtttcag gcaaccggga
     2041 tcagctggat tcgcctgcca tcgacaccca gcgcgacgcg gccctcacgc agggcgaccg
     2101 cgtcctcgcc gaacacggcg cgccgccagc cgtgcaaggc cggaacatcc ggcgcatctt
     2161 ccgacgcgat gcggtcgatg tcgtcggagg aagcgatcag tttcggcgcc acctgatttt
     2221 cctcgcaccg ggcggtgagc agaaccttca ataattgcac cagtgccgca gatggcctgg
     2281 ccgtctcgcg ctgtctgggc gcggttggca gatccgcctc cggcaaggca atcgtagccg
     2341 ccgccgcttc cagcaaagag gcgccggtac ggccctcggc aaagccgcgc gtgatcccgc
     2401 gcgcgcgcga caaagcctct gcgttggttg gggcgatggc agcgatttcc attaatgttt
     2461 cgtctttcag cagacgctga cgggggatgt tgatccgctg cgcctcctgc tcccgccacg
     2521 ccgcgaggct gcggaccagg gccaggaaac gccggttgtt gccgcggacc ttcaggcgtt
     2581 cccacgcggt ttccggatcg gtgcgatacg tgccggggtt ggtcaggatc gccatttcct
     2641 cggcaaccca ggacaggcgg ccttcttcaa ccaatcggtc gcgcaaccgt cgatacaccg
     2701 cgcgcaacca ggtcacgtca gcggcggcgt aagtcatttg cgccggagac aacggacggg
     2761 ctgcccaatc gctgaagcga tgggctttgt cgatcgaacc accggtcagg ttggagacca
     2821 gggcatcata gccgacctga tcgccaaagc cggcgaccat cgcggcgacc tgggtgtcga
     2881 acaacggggt cggcaccgca tcaaagcgat ggacgaaaat ctccacatcc tggcgcgccg
     2941 cgtgaaacac tttcgttact gccggatcgg ccagcaggtc tcccagaggc gacaggtcga
     3001 gacggtcgga cacggtgtcg acgattgcga cctcggtctc gccagccagt tgcacgaggc
     3061 acagttccgg ataataggtc cgctcccgca tgaattcggt gtcgacggtg acgaagttct
     3121 cgttcgccag acggtggcag agggcggcca ggccatcggt gtcggtgacg acggtggggg
     3181 gcgggaactc gggaatcggg tgtcggggca tcaggcggtt ttacaccggt atgcggtgaa
     3241 ggccagtggc ggacctggcg gaacgccgcg gatctgagcc aaatgccgtc cgacgaagtt
     3301 tatacttcat acctcccatt tgcatctcgg ctgatcgagg caatcctgag cttgaccttg
     3361 ccggtaagcc cagtcttttc tccggcactc cggtggtcct gttgtcccct tgggccgccc
     3421 cttcgtcagg aagagatttc catgcacccc taccgctcgc acacctgtgg cgcactgcgt
     3481 gctgccgacg ctggccagac ggctcgcctg tccggttggg tgcatgccaa acgcgatcac
     3541 ggcggcctgc tgtttatcga tctgcgcgac cattacggga tcacgcagtg tgtgtttgcc
     3601 actggctccg cggtgtttga gcaggctgag gcagtgcgcc cggaaagcgt gatcaccgtg
     3661 acgggcgcag tggttgtgcg cgaggaaggc accgtcaatc cgaaattgcc gaccggcgag
     3721 atggaactgc gcgtcgccga tctcgccgtg cagtcggctg ccgaggtgct gccgatgcag
     3781 gtcgccggcg aggaaaaatt ccccgaagat atccgcctgc gctaccgctt catcgacctg
     3841 cggcgcgaca aactgcatcg caacatgatg ctgcgctcga acgtcatcac ctcgatccgg
     3901 cggcggatga tcgaggccgg gttcctggaa tatcagacgc cgatcctgac cgcctccagc
     3961 ccggaaggtg cgcgcgactt cctggttccc gcccggctgc atcctggcaa attttacgcg
     4021 ctgccgcagg cgccgcagca gttcaagcaa ttgctgatgg tggcaggctt cgaccgctat
     4081 tttcagattg cgccgtgctt tcgtgatgag gcgtcgcggg ctgaccgctc gccgggcgaa
     4141 ttctatcagc tcgatttcga aatgagctac gtgacccagg acgacgtgtt cgcgaccatc
     4201 gagccggtgg ttggcggcgt atttgaagaa ttcagcgaag gccgggcggt aacgcccgca
     4261 ccctggccgc aaattcccta cagcacggcg atgctggaat atggttcgga caagccggac
     4321 ctgcgcaatc cgctgcgtat tgccgacgtg accgctcatt atgctggctc gggattcggc
     4381 ttgtttgctc ggatcgctgc caccggcggg attgtccgtg cggtgccggc acccggcgcc
     4441 gccgcccaac ctcgcagctt ctttgaccgg ctcaacgaat gggcgcgtgc cgagggccag
     4501 ggcggattgg gttacatcgt ttatgacgcc gacggaccga aagggccgat cgcccgcaac
     4561 ctggagccgg aacgggccga ggcgatccgt tccgcctgtg gtttgaatgc cggggatgcg
     4621 gtgttcttcg tcgccggcaa acaagacgtg gcggagaaat tcgccggcgt ggtgcggaac
     4681 cgcatcgccg aagagctcga tttgtcggaa aagggtgcgt tccggttctg ctggatcacc
     4741 gactttccca tgttcgagat caacgaggaa accaaacaga tcgacttcag ccacaacccg
     4801 ttcagcatgc cgcaaggcgg actggaggcg ttgaacacgc aggacccgct gaccatcaag
     4861 gcctggcaat acgacgttgt ttgcaacggc atcgagctgt cctccggcgc gatccgcaac
     4921 caccggccgg agatcatgct gaaggctttc gccattgcgg gctataaggc cgaagaagtg
     4981 gaggctcgct tcggcggcat gttgaatgcg ttccgcttcg gcgcgccacc ccatggcggg
     5041 tcggcgcccg gtatcgaccg gatcgtcatg atgctggccg acgagccgaa tatccgcgag
     5101 gtgatcctgt ttccgctgac ccaacagggc gaggacctgc tgatgggcgc accggccgag
     5161 gtgacgccgg cacggttgaa ggagttgtcg ctgcggatcg atctgccacc aaaaccggtt
     5221 cgctagcgcc gccggccggc cgggtatctg gcgcgctgcg gcgaccggcc aggcagggac
     5281 agtgacgctg gcgggttgct tgccgaccat tctgcagcgg gccaaagccc ggtcgtggtg
     5341 gatgtgattc gctcgcaccg gcgcatgagg aacgggtgcc ccgccggccg ttcgcgggtc
     5401 gaggtttcct tgttgacacc gagggctcag gtcaccattt tgcgcccgcc cagtaccggc
     5461 ccgtttcgtg ccggcccgca caggcgacag gatggggctg tagctcagtt gggagagcgc
     5521 ctcgttcgca atgaggaggt caggggttcg attccc
//
LOCUS       DATAVD010001438         1679 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2369134, whole genome shotgun sequence.
ACCESSION   DATAVD010001438 DATAVD010000000
VERSION     DATAVD010001438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1679
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2369134"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            40..>1679
                     /locus_tag="VHX39_27570"
     CDS             40..>1679
                     /locus_tag="VHX39_27570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HEX3994952.1"
                     /translation="MSDNAAPPPDSDPEAYDAASISVLKGLDAVRRRPGLYIGDTDDG
                     SGLHHMAFEIIDNAVDEVQAGFASHVELTLNGDGSVTVRDDGRGIPTDIHQEEGISAT
                     EVVLTRLHAGGKFNQNSYKVSGGLHGVGAAVVNALSEWMEVKIWRLGQEHRIRFQHGE
                     ADGPLEIVGPSDRPTGTEVTFKPSPSTFTKTEFDYTVLERRVRELAFLNSGMTIVLRD
                     ERHTPAVESVMRYDGGLVAFVEWLDRSKNPVFTPPINLRTTDDAQGIRAEFALSWNDS
                     FHETMLCFTNNIPQRDGGSHLAGFRQALTRVVTKYAQSMGKKESLELVGEDMREGMTA
                     VLSVKVPDPKFSSQTKDKLVSSEVQPVVQAAVADAVSHWFETHPKEAKGIIQKVMDAA
                     AAREAARKARELTRRKGVLDVSTLPGKLADCQERDPAKCEIFIVEGDSAGGSAKQGRD
                     RKFQAILPLKGKILNVERARFDRMLGSQEIGTLITALGTGIGQGPVEQGGFDASKLRY
                     HRIVIMTDADVDGSHIRTLLLTFFFRQMRELIERGHLY"
BASE COUNT          316 a          521 c          558 g          284 t
ORIGIN      
        1 ctagagtatc aatcccatcg gatggagtcg ttccccggca tgtctgacaa cgccgcgccg
       61 ccccccgatt ctgaccccga agcgtacgac gccgcctcga tctcggtcct caaaggcctc
      121 gacgccgtgc gccgccgccc cggtctgtat atcggggaca ccgacgatgg ctccggcctg
      181 catcacatgg cgttcgagat catcgacaac gcggtggatg aggttcaggc gggcttcgcg
      241 tcgcacgtcg aactgacgct caacggcgac ggcagcgtca ccgtgcggga tgacgggcgt
      301 ggcattccga ccgacatcca tcaggaggaa ggcatctcgg cgaccgaggt cgtgctgacg
      361 cgcctgcatg ccggtgggaa attcaaccag aattcctaca aggtatccgg tggtctgcac
      421 ggcgtcggcg cggcggtggt gaatgcgctg tccgagtgga tggaagtgaa gatctggcgc
      481 ctcggccagg agcaccggat ccggttccag catggtgagg ctgacggacc gctggagatt
      541 gtcggcccgt ccgatcgtcc caccggcacg gaagtgacct tcaagcccag ccccagcacg
      601 ttcaccaaga ccgaattcga ctacaccgtg ctggagcggc gggtgcggga gctggcgttc
      661 ctgaattcgg gcatgacgat cgtgctgcgt gatgagcggc acacgccggc tgtggaaagc
      721 gtcatgcgct atgatggcgg gctggtggcg ttcgtcgaat ggctggaccg ctcgaagaac
      781 ccggtgttca cgccgccgat caatttgcgg accaccgatg acgcgcaggg catccgcgcg
      841 gaattcgcgt tgtcgtggaa cgacagtttc catgagacga tgctgtgctt caccaacaat
      901 atcccgcagc gtgatggcgg gtcccatctg gccggtttcc gccaggcgct gacccgtgtg
      961 gtgacgaaat acgctcagag catggggaaa aaggagtcgc tcgaacttgt cggcgaggac
     1021 atgcgcgagg gtatgaccgc ggtgctgtcg gtgaaggtgc cggatccgaa attctcctcg
     1081 cagaccaagg acaagctggt gtcgtccgag gtgcagccgg tggtgcaggc ggcggtcgcc
     1141 gatgctgtct cgcattggtt cgagacacat ccgaaagagg ccaagggcat catccaaaag
     1201 gtgatggacg cggccgcggc acgtgaggca gcccgcaagg cgcgcgaact gacccggcgc
     1261 aagggcgtgc tggatgtctc caccctgccc ggcaagctcg ccgactgcca ggagcgcgac
     1321 cccgcgaagt gcgaaatctt catcgtcgag ggtgacagcg ccggcgggtc ggccaagcag
     1381 ggccgcgacc gcaagttcca ggcgatcctg ccgctgaaag gcaagatcct caacgttgag
     1441 cgcgcccggt tcgaccgcat gctcggcagc caggaaatcg gcacgctgat caccgcgctg
     1501 ggcaccggca tcggccaggg gccggtcgag cagggcggct tcgatgcgtc gaagctgcgc
     1561 taccaccgca tcgtcatcat gaccgacgcc gacgtggacg gttcccacat ccgcaccctg
     1621 ctgctgacgt tctttttccg ccagatgcgc gaactgatcg agcgcgggca tctctacat
//
LOCUS       DATAVD010001439         2276 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_883964, whole genome shotgun sequence.
ACCESSION   DATAVD010001439 DATAVD010000000
VERSION     DATAVD010001439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_883964"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(186..701)
                     /locus_tag="VHX39_27575"
     CDS             complement(186..701)
                     /locus_tag="VHX39_27575"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEX3994953.1"
                     /translation="MALLTRRTVLAGAGTLTAGAALRKSYAAELPDLAEVLVPVNPPQ
                     SPPAGVFVDADGGEHTLGSFLGHGMVINFWATWCQPCIAEIPSLAVLPLSSDRGGASV
                     VAAWLKQHDVTGLPVLLDPHGALGSAWGGRGIPTTHIIARDGKERARMEGAADWSSAA
                     TIALIQKLVEG"
     gene            717..2126
                     /gene="argH"
                     /locus_tag="VHX39_27580"
     CDS             717..2126
                     /gene="argH"
                     /locus_tag="VHX39_27580"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003625144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEX3994954.1"
                     /translation="MNETSDRRNVPANQQWGGRFAAGPAAIMEEINASIGFDKKLWRQ
                     DIRASLAHAAMLGKAGVISPDDVTAISDGLNGIAAEIEAGRLPFTTALEDIHMNIEAR
                     LTERIGEAGKRLHTARSRNDQVATDFRLWVRDAIDGISAQVTELMRALAERAAAHAAD
                     PMPGFTHLQTAQPVTFGHHLLAYVEMLERDRGRLADTRRRLNVSPLGAAALAGTSFSI
                     DREMTAAALGFDRPAANSLDAVSDRDFALEFLSAAAISAMHLSRFAEEIVIWCSAPYQ
                     FIRLSDAFTTGSSIMPQKRNPDAAELVRAKTGRVNGALVGLLTVMKGLPLAYAKDMQE
                     DKEPVFDAAEAWALSLAAITGMVRDMTPDVARMREFAGSGFATATDLADWLVRVLKRP
                     FRSAHHITGTLVGIAEQKGVALSDLTLEDMREVEPGITAEVFSVLTVDASVASRTSFG
                     GTAPANVAREASRWLAALA"
BASE COUNT          418 a          754 c          722 g          382 t
ORIGIN      
        1 cgccttttcg gaaccagatg gcttgaccag caacgctgtc gcccttcccg cacgggagcg
       61 gccctgattg cctttccgct cagatttcga ttgcgccagc gccataacga gtctccgcgg
      121 ataaattggt caaactcgta aggttcgtca agtttgtcag caactaacgg aggcgcgagt
      181 gcccgttacc cctccaccaa cttctggatc agcgcgatcg tggccgccga ggaccagtcc
      241 gccgcaccct ccattcgcgc ccgctccttg ccatcccggg cgataatgtg cgtggtcgga
      301 atccccctcc cgccccacgc ggagcccaga gcaccatgcg gatcgagcag caccggcaaa
      361 cctgtgacgt cgtgttgctt aagccacgcc gcaaccacgc tcgccccgcc gcgatcggag
      421 gacaatggca gcacggcaag cgacggaatt tcggcaatgc aaggctggca ccaggtggcc
      481 cagaaattga tcaccatgcc gtgaccgagg aacgaaccca acgtgtgctc accgccatcg
      541 gcatccacga atacgccggc aggcggggat tgcggcggat tgaccggcac cagcacctcg
      601 gccagatcag gcaactcggc ggcgtacgat ttgcgcagag cggcgcccgc ggttagggtc
      661 ccggcacccg ccagaaccgt gcggcgtgtc agcaaagcca ttccggaatc ctcccgttga
      721 acgagacctc agatcgccgc aacgtccccg ccaaccagca atggggcggg cggttcgccg
      781 ccggaccggc agcgatcatg gaggagatca acgcctccat cggcttcgac aagaaactgt
      841 ggcgccagga cattcgcgcc tccctcgcgc atgccgcgat gcttggcaag gccggagtga
      901 tcagtccgga cgatgtgacg gcaatcagcg acggcctcaa cggcatcgcg gccgagatcg
      961 aggccggcag gctaccgttc acgacggcgc tggaagacat ccacatgaat atcgaggcgc
     1021 ggctgaccga acgtatcggc gaggccggca agcgcctgca cactgcgcgc agccgcaacg
     1081 accaggtcgc caccgatttc cggctgtggg tgcgcgatgc aatcgacggg atctcggcgc
     1141 aggtcaccga attgatgcgc gcattggcgg agcgcgccgc cgcccatgcc gccgacccga
     1201 tgcccggttt tacacatctg caaaccgcgc agccggtgac gtttgggcat catctgctgg
     1261 cctatgtcga aatgctggag cgcgaccgcg gccgtctcgc cgatacgcgg cggcggttga
     1321 acgtctcgcc gctgggtgcc gcggcattgg ccggcacgtc gttttcgatc gatcgcgaaa
     1381 tgaccgccgc cgcacttggc ttcgaccggc cggcggcaaa ctcgctggat gccgtttcgg
     1441 atcgggattt cgcgttggag ttcctgtcgg cggcggccat cagcgcgatg catctgtctc
     1501 gtttcgccga agaaatcgtt atctggtgca gcgcgccgta ccagttcatc cgactgtcgg
     1561 acgcgttcac caccggtagc tcgatcatgc cgcaaaagcg caatcccgac gcggctgaac
     1621 tggtgcgggc caagaccggc cgggtcaacg gtgcattggt cgggctgctg accgttatga
     1681 aaggactgcc gctcgcgtat gccaaagata tgcaggagga caaggaaccg gtgttcgacg
     1741 ccgctgaagc atgggctctg tcgcttgccg cgatcacggg aatggtgcgc gacatgaccc
     1801 ccgacgtagc gcggatgcgg gaatttgccg ggtccggctt tgccacggca accgatctgg
     1861 ccgactggct cgtgcgagta ctgaaacgac cgttccgcag cgcccatcac atcaccggca
     1921 ccctggtcgg catcgccgag cagaaaggcg tcgcactgtc cgacctgacg ttggaggaca
     1981 tgcgcgaggt cgagcctggc atcacggccg aggtgttctc ggtgctgacg gtcgatgcat
     2041 cggttgcctc gcgcaccagc ttcggcggca cggcgccggc aaacgtggcg cgcgaggcgt
     2101 cgcgctggct ggcggcgctg gcatgaggcg ggcgaagtgc cggggcttcg ccccgaaacc
     2161 ccaccaaggg gcgctgcccc ttggatcccc gccaagggca ttgcccttgg aaccactcta
     2221 ttttggttct tccgggaggt ggccaaccgt aacctcgcaa ggtctgtgtc ggccac
//
LOCUS       DATAVD010001440         4206 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2560263, whole genome shotgun sequence.
ACCESSION   DATAVD010001440 DATAVD010000000
VERSION     DATAVD010001440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4206
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2560263"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            168..581
                     /locus_tag="VHX39_27585"
     CDS             168..581
                     /locus_tag="VHX39_27585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994955.1"
                     /translation="MNGVYQRRDLLFGWIFWMFAAFILACGTTHFMEIWVLWHPDYAV
                     QGVIKAFTAAISLATALLLWPLVPRALALPTTAQFQRVTELLSQEAAERERTVGQLEQ
                     SEATFQLLVEGIRDSAIYMLDPGGCVATWNSGAER"
     gene            complement(705..884)
                     /locus_tag="VHX39_27590"
     CDS             complement(705..884)
                     /locus_tag="VHX39_27590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994956.1"
                     /translation="MRLGEMGTGLFQRILGLPDFGQIPGYFGEANDLTGPIDQWMNDD
                     VCPETRSILTNMPIF"
     gene            888..2015
                     /locus_tag="VHX39_27595"
     CDS             888..2015
                     /locus_tag="VHX39_27595"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3994957.1"
                     /translation="MEAIGQLTGGVAHDFNNLLTAILGSLELLKLEGEQQHADFDRLM
                     GVIQLAAERGATLTSRLLAFSRRQALAPRVTDLNRLVSNMSELLRQTLGEQITIEAVL
                     AGGLWTTFVDQNQMESCILNLAVNARDAMPPGGKLTIETGNTYLDDDYAAAHDEVTAG
                     QYVLVAASDTGEGMTEEELGLAFEPFYTTKGEGKGTGLGLSHVYGFVKQSHGHVKLYS
                     EQGHGTTVKIYLPRHTASVPVPTSSPKPAPIAIPHGVEGVLVVEDDEDVRRYSAEALS
                     HLGYFVLQAPDAATALQMLEDQPRVAVLFTDVGLPGMNGRKLADEALLRAPGLKIIFS
                     TGYARNAIVHHGVLDSGIYLLPKPFTIEGLARMVRNVLESR"
     gene            complement(2043..2915)
                     /locus_tag="VHX39_27600"
     CDS             complement(2043..2915)
                     /locus_tag="VHX39_27600"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3994958.1"
                     /translation="MSLTFRTIHPVFVAEVTGVDLTRPLSPDDAAAIDAGMDEYAVLV
                     FPGQPLTDQQQLDFTRNFGELEGYNTPGHIRKQTDSRLGPGMADFSNLDKSGAIMSDQ
                     DRVWFFKLGDRLWHSDSSFRPVPAKYSLLSGRVIPSWGADTEFADMRAAYDALDARTK
                     AEVEDLVCEHSLAFSREAIGFTDLTPEERNAFRPVRQRLVRTHPVTGRKSLFLSAHAG
                     TIEGWTVPEARMFLRDLTESATQQRFVYSHEWRVNDLVIWDNRTTMHRARRFDRNEVR
                     DVRRTTLAGDVATI"
     gene            3145..>4206
                     /locus_tag="VHX39_27605"
     CDS             3145..>4206
                     /locus_tag="VHX39_27605"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3994959.1"
                     /translation="MVYRLLPAVNRRTLIKATTALGAMQLASPFIISARGETPIKIGM
                     VDPLTGTLSALAQSEVEGAKYAVAEVNKKNGILGRQVELLVEDSANDVGTGVQKTRKL
                     IDRDQVDVIFGDVNSGIAYAMAGVTTEKKVFHIVPGGHTDPITGTDCKWNVFRICNTT
                     SMDAAAITGELVKRFGKRWFFITPDYAYGHTLQDAFVKNLKAAGGEFEGDMLPITNTE
                     FSATLIKAKAYKPNVLLNNMGGLAQIDCMKQFVQFGMVKDMALGGALFELESIKSVPK
                     EAQTGWWDMEWWWDQPKVPEVVKFVSEFRAANGKTPTARHWFGWVAVHSVRLAADKAK
                     SMEGPKLAVALEDMELPPDV"
BASE COUNT          871 a         1213 c         1294 g          828 t
ORIGIN      
        1 atgcacaggc acgtcaccca caacaagtgc tatgccacgt tcagggaatt cagcatcgcg
       61 atgctgacct tcctccgcga cgccgtgccc gcgaactgga atgcactgtg cgatgaggtc
      121 accgacaact ttcgtgtcat tgtcccaacg gactaccgga taatcgcgtg aacggggtat
      181 atcagcggcg tgacctgctt tttggctgga tattctggat gttcgctgcg ttcatcctgg
      241 cctgcggcac cactcacttt atggagatct gggttctgtg gcatccggat tacgccgtcc
      301 agggcgtgat caaggcattc acggcggcca tctcacttgc aaccgcgctt ctgctctggc
      361 cactggttcc acgtgcgttg gcgctgccga cgacggcgca atttcaacgg gtgaccgaac
      421 tgttatcgca ggaggcggca gaacgggagc gcaccgtcgg acaactggaa caatcggagg
      481 caaccttcca gctgttggtt gaaggtatca gagattctgc catctacatg ctcgatccgg
      541 gcggctgtgt ggcgacctgg aattctggcg ctgaacggta aaagggatat tccgccgcgg
      601 aagttcttgg ccagcatttc tcgcattttt acaccaagga cgaccaggac gccggcgtcc
      661 cgggtcaggc actcgaattc gcggcgaccg ccggtcgata tgaatcagaa aattggcatg
      721 ttcgtaagga tggaacgcgt ttctgggcaa acgtcgtcat tcatccattg gtcgatcggt
      781 ccggtcagat cgttggcttc accaaaataa ccagggatct gaccgaagtc cggcaggccg
      841 aggatgcgtt ggaacaaacc cgtgcccatc tcgcccaggc gcaaaagatg gaagcgatcg
      901 gccagctgac cggaggcgtt gcacacgact tcaacaatct gctcacggct atcctgggga
      961 gtctggaact tctgaaactc gagggcgagc aacagcatgc cgattttgat cgattgatgg
     1021 gcgtgatcca gcttgcggcc gaacggggtg ccacgttgac gagccggctt ctggctttct
     1081 ctcgcaggca ggcgctggcg cccagggtga ccgaccttaa ccggttggtg agtaatatgt
     1141 cggaattgct gcgccagact ttaggcgaac agatcaccat cgaggcagtt ctggccggcg
     1201 gtctctggac aacatttgtc gatcagaacc agatggagag ctgcattttg aacctggcgg
     1261 tgaatgcgcg cgatgcgatg ccgccgggcg gtaagctgac gatcgaaacc ggtaacacct
     1321 atctcgatga cgactatgct gcggcgcatg acgaggtcac tgcgggccag tacgttttgg
     1381 tcgcagccag cgataccggt gagggaatga ccgaagagga actgggtctg gccttcgagc
     1441 ctttctacac cacaaagggc gaaggcaagg gaaccggcct cgggctcagt cacgtctacg
     1501 gcttcgtgaa gcagtcgcat ggccacgtta aactttacag tgagcaaggc catggtacga
     1561 ccgtgaaaat ctacctgccg cgccacaccg cgtctgtgcc cgtccccact tccagcccga
     1621 agccggcgcc aatcgctatc ccgcacggcg ttgagggtgt gcttgttgtt gaagatgacg
     1681 aggatgtccg aaggtatagt gctgaggcgc tcagccatct cggctatttc gtattgcagg
     1741 cgccggatgc cgcaactgcg ttgcagatgc ttgaggacca gccgcgcgtt gccgtgcttt
     1801 tcactgatgt aggactgcct ggcatgaatg gccgcaaact cgcggacgaa gccctactcc
     1861 gggcacctgg actgaaaatc atcttcagca ctggttacgc gcgcaatgcc attgtgcatc
     1921 acggtgttct ggacagcgga atttacttgt tgccgaagcc tttcacgatc gaaggcctgg
     1981 ctcgtatggt acgcaacgtc ctcgagtccc ggtgaacgcg aggccgtcat catgttaacg
     2041 ggtcatatcg tcgcaacatc ccccgccaga gtcgtgcgcc gtacgtcgcg cacctcgttg
     2101 cgatcgaagc gccgcgcccg gtgcatcgtg gtgcggttgt cccagatcac caaatcgttg
     2161 acccgccatt cgtgcgaata aacgaagcgt tgctgggtcg cggactcggt caggtcgcgc
     2221 aggaacatcc gcgcttccgg cacggtccag ccctcgatgg tcccggcatg ggcggacagg
     2281 aacagcgact tccgtccggt caccggatgg gtgcgcacca gccgctggcg gaccggacgg
     2341 aacgcgttgc gttcttccgg ggtcaggtcg gtaaagccga tcgcctcgcg ggagaacgcc
     2401 agcgaatgct cgcagaccag atcctcgacc tccgcctttg tccgcgcgtc caacgcatca
     2461 taggcggcac gcatgtcggc aaattccgta tcggcgcccc aggatgggat gacccgcccg
     2521 gatagcagcg aatattttgc cgggactggc cggaacgagc tgtctgagtg ccacaaccga
     2581 tcgcccagtt tgaagaacca gacgcgatcc tggtcggaca tgatggcgcc ggacttgtcg
     2641 aggttggaga agtccgccat ccccggcccc aggcgtgaat cagtctgctt acgaatatgg
     2701 cctggcgtat tgtagccctc gagctcgcca aagttgcggg tgaaatcgag ctgctgctgg
     2761 tcggtcagag gttggccggg aaacaccagg acggcgtact cgtccatccc ggcatcgatc
     2821 gcggcggcgt cgtccgggga caagggccgg gtcagatcga cgccggtgac ctccgccaca
     2881 aagaccgggt gtattgttcg aaacgtcagg ctcatgtttg gtggctcccg gtgcagcact
     2941 ggcgtgcggt gtcggcggaa gcttatttgc aacccgggtt cgaggtaaac gcccgccgta
     3001 tggagcactg ctctcgacgt ccgaccaaac ccgtgcaaaa agccccgttc gccggggggg
     3061 gcgcacagcg cttcctggca caaaatatca attgtaacac cggatgcacg acacgcacat
     3121 gcgttcggtc ctgagaggaa acccatggta taccggctac tcccggcggt taaccgccgc
     3181 actctgatca aggccaccac cgctctgggt gcaatgcagc tcgcatcccc attcatcatc
     3241 agcgcccgcg gggagacgcc aatcaagatc ggcatggtcg atccgttaac cggcaccctg
     3301 tccgcgctcg cccagagcga ggtcgagggc gcgaaatacg ctgtcgccga agtcaacaag
     3361 aagaacggca tactgggccg gcaggtcgag cttcttgtgg aggattccgc caatgatgtc
     3421 ggcaccggtg tgcagaagac gcgcaagttg atcgaccgcg atcaggtgga cgtgatcttt
     3481 ggtgacgtaa actccgggat cgcgtacgca atggcgggcg tcacgactga gaagaaggtg
     3541 ttccacatcg tgcctggtgg ccacacggac cccatcaccg gcacagattg caaatggaat
     3601 gtattccgca tttgcaacac gacctcgatg gatgccgcag cgattaccgg ggaactggtc
     3661 aagcgcttcg gcaagcggtg gttcttcatc acgcccgatt acgcgtacgg tcacacgttg
     3721 caggatgcct ttgtcaagaa cctgaaagcg gccggtggcg agttcgaggg cgacatgctg
     3781 ccgatcacca acaccgagtt ctccgccact ctgatcaagg ccaaagccta taaaccgaac
     3841 gttctgctca ataatatggg tggactggcg cagatcgatt gcatgaaaca gttcgtgcag
     3901 ttcggcatgg tcaaggacat ggcgcttggc ggtgcgttgt tcgaactcga gagcatcaag
     3961 tcggtcccga aagaagcgca gaccggctgg tgggacatgg aatggtggtg ggatcagccg
     4021 aaagtgccgg aggtggtgaa gttcgtctcc gagttccgcg cggcaaacgg aaagaccccg
     4081 accgcgcgtc attggttcgg ttgggttgcg gttcattcgg tgcgactggc cgccgacaag
     4141 gcgaagtcca tggaggggcc aaaactcgcc gtggcgctgg aggatatgga actcccgccc
     4201 gacgtg
//
LOCUS       DATAVD010001441         4429 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1626431, whole genome shotgun sequence.
ACCESSION   DATAVD010001441 DATAVD010000000
VERSION     DATAVD010001441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4429
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1626431"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            74..1012
                     /locus_tag="VHX39_27610"
     CDS             74..1012
                     /locus_tag="VHX39_27610"
                     /inference="COORDINATES: protein motif:HMM:NF019003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050485 - oxidoreductase activity, acting
                     on X-H and Y-H to form an X-Y bond, with a disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/sarcosine/betaine reductase
                     selenoprotein B family protein"
                     /protein_id="HEX3994960.1"
                     /translation="MDQDLDSLFGFAPDHDSPVPYMQRTREYYKAIGYTTPYRWAHYL
                     QAPFTALGKPLKECNVAIVTTAAPYQPDKGDQGPGAAYNGSAKFYQVYSGDTGRDHDL
                     RISHIGYDRIHTTATDSNSWFPLPALRRAAGAGRIGQVAARFHGAPTNRSHRVTIETD
                     APEILSRLRQDAVDAVIVVPNCPVCHQTSSLVARHIEANGIPTVLMGCAKDIVEHAAV
                     ARFLFSDFPLGNSAGKPHDAASQEQALELALRLLESAVGPQTTMQNPQRWNADGRWKL
                     AYSNVDQLSAEELKQRRAEFDRQKELARPNRVERAA"
     gene            1009..2202
                     /locus_tag="VHX39_27615"
     CDS             1009..2202
                     /locus_tag="VHX39_27615"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3994961.1"
                     /translation="MNRPFSGVRILDFTQVLAGPYGSYQLALLGADVIKVERTEGEDM
                     RRTPLSRIWAERGMAPSWLAINGNKKSLTLDFRKPAAIEILRKLAVKADVVMENFRGG
                     VMDRLGIGYKALAEINPKLIYCAISGFGQTGPYSHEAGYDGKIQALSGIMSITGHPEM
                     GPTRAGFAVCDVLSGMTAAFAVASALFQRTHTGEGQFIDVSMLEASLAFLSTQVADFT
                     VAGHRQEQFGNQAISRKVTANLFRAKDSYLLLAVNDEKQFRALMITLGCTGVFDDPRF
                     GDWFQRKENEAALREIIETALAKQDAKAWEKQLNAAGAPSASIWTIEEVLNHPQIIAR
                     EVMQSVQTQYGMLQLMGSGFQMAHGGGRLDTAPPELGADTDTILAGLGYDAAAIAALR
                     AEGVL"
     gene            complement(2261..3403)
                     /locus_tag="VHX39_27620"
     CDS             complement(2261..3403)
                     /locus_tag="VHX39_27620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX3994962.1"
                     /translation="MDRSLHETLTGWRRHLHANPELTLHEKETSAFVQTRLAELGVPF
                     VAGVGGHGVVATLQRGNSNRSVGLRADMDALPIIETSGVTHASRKHGVMHACGHDGHT
                     VSLLGAAAMLVNDPSWTGTVQLVFQPAEEGGGGAKSMIADGLFERFPMERIFGYHNWP
                     GLEAGTVALHDGPVMAAGGRVYFTIKGHSGHAALPHLTRDPMVAAAHLLIALQTIVSR
                     NVDPLESGLLTIGTMQCGSAANQISGEAVMRGTMRTLKESVRDEMEAAVDRIAAGVAQ
                     TFGVSINVEQIRGMPVTMNSAAERDLAADAVQAASIPLRRDLAPAMTGEDFAWYLQRR
                     PGAFAWVGNGPSDGGRELHNSNYDFNDAILPAASGYLAGVAKRALG"
     gene            complement(3403..4257)
                     /locus_tag="VHX39_27625"
     CDS             complement(3403..4257)
                     /locus_tag="VHX39_27625"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HEX3994963.1"
                     /translation="MKFGASMFFTDYSMAPTELAVALEQRGFDIVWAPEHSHIPVSRK
                     TPFIMGGDLPKRYHDVMDPCVTLTAAALATKSLKIGTGVCLIAQRDPIQTAKLVASID
                     QISGGRFVFGVGNGWNQDEMENHGTVFTSRHKLARERVEAMQAIWTQDRAEYHGEFVN
                     FDPMMAWPKPVQKPYPPILVGGAFPYSARRAVRYGNGWMPQVTEYAKTPLIELIPRFR
                     QLAAENGRDPASLEISIGGQRPDVELIKQYQDVGVNRVSCSLESDKAPAILPILDQWA
                     EIIRKVNG"
BASE COUNT          906 a         1362 c         1340 g          821 t
ORIGIN      
        1 tgggcaccgg tgttgcagac attcatgact aagctggaaa attgcccgct ggaaaattaa
       61 aggagagacg cgcgtggatc aggacctcga ctcgctgttc ggcttcgcac ccgaccatga
      121 ctcgcccgtt ccctatatgc aacggacccg cgaatattac aaagccatcg gctataccac
      181 gccgtaccgc tgggcgcatt atctgcaggc gccatttacc gccttgggga aaccgttaaa
      241 agaatgcaac gtcgcgatcg tcaccacggc ggcgccctat cagccggaca aaggcgatca
      301 agggccgggt gcggcgtata acggcagcgc caagttctac caggtatatt ccggcgatac
      361 cggccgcgat cacgatttgc gcatttccca catcggttat gaccggatcc acacgacagc
      421 gaccgattcc aacagctggt ttccactgcc cgcattgcgc cgggctgccg gtgcaggtcg
      481 cattggccag gttgcggcgc gcttccatgg tgcgccgacc aaccgcagcc atcgcgtcac
      541 gatcgaaacg gacgcgccgg agatattgtc acgcctgcgg caggatgccg tagacgcggt
      601 catcgtggtg ccgaattgtc cggtttgcca tcagacctcc agccttgttg cgcgtcacat
      661 cgaggcgaac ggaattccca cggtgctgat gggctgtgcc aaggatattg ttgaacacgc
      721 cgcggtggcg cggtttctgt tcagcgattt tccgcttggc aacagcgcag ggaagccgca
      781 cgacgctgcc tcgcaggaac aggcgctgga actggcgttg cgcctgctgg aatcggctgt
      841 cgggccgcaa accacgatgc aaaatccgca gcggtggaat gcggatgggc ggtggaaact
      901 ggcctactcc aacgtcgacc aactcagcgc cgaggaactc aagcaacgcc gcgccgagtt
      961 cgaccggcaa aaggaactgg cgcggcccaa ccgggttgag cgcgcagcat gaaccggccg
     1021 ttcagcggcg tgcgtattct cgacttcact caggtgctgg cgggtcccta cggatcgtat
     1081 caacttgcgc tgcttggcgc ggacgtgatc aaggtggagc gaaccgaggg cgaggacatg
     1141 cgccgcacgc cgctgtcccg catttgggct gagcgcggca tggcgccgtc ctggctggcg
     1201 atcaacggca acaagaaaag cctgacattg gatttccgca agccggcggc gatcgagatc
     1261 ctccgcaagc tggcggtgaa agctgacgtg gtcatggaaa atttccgcgg cggcgtgatg
     1321 gaccggctgg gtatcggtta taaggcattg gccgaaatca atccaaaact gatctattgt
     1381 gcaatttccg gctttggtca gaccggtccc tatagtcatg aagccggcta tgacggcaaa
     1441 atccaggctc tctccgggat catgtcgatc accgggcatc ccgagatggg gccgacccgg
     1501 gccggctttg cggtctgcga cgtgctgtcc ggaatgaccg cagcgttcgc ggtcgcgtca
     1561 gcattgtttc aacgcactca taccggcgag ggccagttca tcgacgtctc gatgttggag
     1621 gccagtctcg cttttctgtc gacccaggtt gccgacttca ctgttgccgg tcaccggcag
     1681 gagcagttcg gcaatcaggc gatcagtcgc aaggtgaccg cgaatttgtt ccgggccaag
     1741 gatagttatc tgctgctggc cgttaacgac gaaaagcagt tccgcgctct gatgatcaca
     1801 ctgggctgca ccggcgtgtt cgatgatccg cgcttcggcg actggttcca acgcaaggaa
     1861 aacgaagcgg cgttacggga aatcatcgaa accgctttgg caaagcaaga tgcgaaggcg
     1921 tgggaaaagc aactcaatgc cgccggcgcg ccgtcagcca gcatctggac catcgaggaa
     1981 gtcctcaacc acccgcaaat cattgcccgt gaggtgatgc agtcggtgca aacgcagtac
     2041 ggcatgctgc agttgatggg ctcggggttt cagatggcgc atggcggagg ccggttggat
     2101 accgcgccgc cggagcttgg cgccgatacc gatacgatat tggcgggact tggttacgac
     2161 gcggcagcga tcgcagcgct gcgggcggag ggggtgttgt aacagacaga tgcccgcgtt
     2221 accgggacat cagcgcaatg cggagcctgg cgaaagcgga ctatcccaac gcccgcttcg
     2281 cgacgccggc aagatagcct gacgcggcgg gcaaaatcgc gtcgttgaag tcgtaattcg
     2341 aattgtgcaa ttcccgcccg ccatccgaag ggccgttacc aacccaggca aaggcgccag
     2401 gccggcgttg caggtaccag gcgaagtcct cgccggtcat cgccggcgcc agatcgcgcc
     2461 gcagcggaat gctcgccgcc tgcaccgcgt cagccgccaa atcgcgttcg gcggcggaat
     2521 tcatggtgac cggcataccg cggatctgct cgacgttgat gctcacccca aaggtttgcg
     2581 caacgccggc cgcgatacga tcaacggccg cttccatctc gtcgcgcaca ctttctttta
     2641 acgtgcgcat ggtgccgcgc atcaccgcct cgccggaaat ctggttggca gcactgccac
     2701 attgcatcgt gccaatggtg agtaagccgg actccaacgg atcgacgttg cgcgacacga
     2761 tcgtttgcag tgcaatcaac agatgcgcgg ccgcaaccat cgggtcgcgc gtcaaatgcg
     2821 gtaatgcggc gtgaccggaa tggcctttga tggtgaagta cacccgtcca cccgcggcca
     2881 tgaccggacc gtcatgcagc gcgacggtcc ccgcctccag gccgggccag ttgtgatagc
     2941 caaaaatccg ctccatcgga aaccgctcga acagcccgtc ggcgatcatc gatttcgcgc
     3001 cgccgccacc ctcttccgcc ggctgaaaca ccagttgcac cgttccggtc caggacggat
     3061 cgttgaccag catcgccgcg gcacccagta aggacacggt gtggccgtcg tgaccgcagg
     3121 catgcatcac gccgtgtttg cgggaggcat gcgtgacacc ggaagtctcg ataatcggca
     3181 gtgcatccat gtcggcgcgc aagccgaccg aacggttgga attgccgcgt tgtagggtcg
     3241 caaccacacc atgcccgccc acacctgcaa cgaacggcac gccaagttcg gccaaccgcg
     3301 tctggacaaa cgccgaagtt tccttttcgt gtaaggtcag ttccggattg gcgtgcaaat
     3361 gccggcgcca tccggtcaac gtttcgtgca aagaacgatc catcagccat tcacctttcg
     3421 gatgatctcg gcccattggt cgaggatcgg caaaatcgcc ggcgccttgt cggactccag
     3481 actacacgac acgcgattca cgccgacgtc ctgatactgc ttgatcagtt cgacatccgg
     3541 ccgctgcccg ccaatggaaa tttccagcga ggcagggtcg cgaccgttct cggcggccag
     3601 ctggcggaag cgcgggatca actcgatcag cggggttttc gcatattcgg tgacctgcgg
     3661 catccagccg ttgccgtaac ggacggcgcg gcgagcggaa tacggaaacg cgccaccgac
     3721 caggatcggc ggatacggct tctgcactgg cttcggccac gccatcatcg gatcgaaatt
     3781 gacgaattcc ccgtgatatt cggcgcggtc ctgggtccag atagcctgca tcgcctcgac
     3841 gcgttcacgg gccagtttgt ggcggctggt gaagaccgtg ccgtggttct ccatctcgtc
     3901 ctggttccag ccgttgccga cgccaaacac aaaccgcccg ccggagatct gatcgatcga
     3961 ggcaaccagc ttggcagttt ggattgggtc gcgctgtgca atcaaacaaa cgccggtgcc
     4021 gatcttcaac gactttgtcg ccagcgccgc ggcggtcagc gtcacacacg gatccatcac
     4081 gtcatggtat cgtttcggca aatccccgcc catgatgaat ggcgtcttcc gcgacaccgg
     4141 aatatgcgag tgctccggcg cccagacgat gtcgaaacca cgttgctcca aagcaacggc
     4201 cagctccgtc ggcgccatgg agtagtcggt gaagaacatc gatgcgccga atttcatgtc
     4261 tgcatcctac ttgcaaggat aacgtacgcc gaggaacgtg aacaatccat ccagcaccgg
     4321 caaatcgcgg ttggccggcg tcccccgcac ccaggtcacg aagtcgtgca ttgtggcagt
     4381 gcggctcggc gccggatttg gaaaacaaaa cgactttttg tcagcagcg
//
LOCUS       DATAVD010001442         1687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2743204, whole genome shotgun sequence.
ACCESSION   DATAVD010001442 DATAVD010000000
VERSION     DATAVD010001442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2743204"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            416..>1687
                     /locus_tag="VHX39_27630"
     CDS             416..>1687
                     /locus_tag="VHX39_27630"
                     /inference="COORDINATES: protein motif:HMM:NF012431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3994964.1"
                     /translation="MNENSTVARVIAGDLAAYGARRCFGLLGTANFKVSHGLVEAGLE
                     LISARHECNAASMADAYAKATGELTLVSVHSGPGLTNALTGIGEAAKSRTPLVVLAGD
                     VPNGAVKNNFYIEQAEMVRAVGAVSERLHTPASARNDTMRAVTHALRGRQTVVLSMPL
                     DVQNAPLGSNLPPLGLPPAPGRLHPDPRVVQRLVDAILQAKRPLILGGRGAVISDAES
                     ALIALADRLGALLATSVCGHGLFASSPWSVGISGGFSSPIADELISESDFIVAFGASL
                     TQWTTKNGKLIAPGGVVAQVDIEVPRLGYQMPVRHAVHGDAKATAEALLAEFDRRGMT
                     TAQAGRRSETMCERIRSGDNHHFPHPDESSARFIDPRTLSKAVDAVLPADRVVASDSG
                     HFCGWVPRYLRVPDARASCLSHSFQSVGLGLP"
BASE COUNT          288 a          527 c          542 g          330 t
ORIGIN      
        1 ttgccgctcg gtcatctcga tttcactgac cccatggtcg agtacccagc ctcgcagcat
       61 ggtgagacgg ctccggtctg gatcggtgaa catcgtgtct ggcaaaatct tcctcacgag
      121 atgatccttt cgccggacgg ccgactcccg ggctgcatac gcggtcgatc ggcggcagcc
      181 ttcgggccag acaaccgggt gttcgaccga gcagcatcgc acgctattcg taacctttct
      241 gttaggacga tcgcgcacgc ttaatcggga cgattgggcg tcttggatgc tattggatta
      301 atccggccat agatccacac tgggtgcggg ctcggaacta ttttcaataa gcgttgctcg
      361 cggtatcggt ccgaaaccgc attccggaca ttggaccgca cgagacgagg actgaatgaa
      421 cgaaaattcc acagtggcac gggtcattgc aggagacctg gccgcctatg gcgcgcggcg
      481 ctgcttcggg cttcttggca ccgccaactt caaggtctca catggcttgg tcgaggccgg
      541 cctcgagttg atctcggcac gccacgaatg caatgccgcc agcatggccg acgcctatgc
      601 caaagcgacc ggcgaactga ccctggtcag cgtgcattcc ggccccggcc tgactaacgc
      661 gctgaccggc atcggcgaag cggccaaaag ccggacgccg ctggtggtgc tcgcgggcga
      721 cgtgccgaat ggcgcggtga agaacaactt ttacatcgag caggccgaga tggtgcgcgc
      781 ggttggcgcg gtgtcggagc ggctgcacac gccggcctct gcgcgcaacg acacgatgcg
      841 agccgtgacc cacgcgctac ggggccgcca gaccgtcgtg ctcagcatgc cgctcgacgt
      901 ccagaacgcg ccgctcggct caaatctccc gccgctggga cttccgccgg cgcctggacg
      961 gctgcacccg gatccgcgtg tcgtgcaaag actcgtcgat gcgatcctgc aggcaaagcg
     1021 tccgctcatt ctcggcgggc ggggcgcggt gatttccgat gccgaatctg cgctcatcgc
     1081 gcttgccgac cgccttggcg ccctattggc aacgtcggtc tgcggccacg gcttgttcgc
     1141 cagtagtccc tggtcggttg gcatcagtgg cggattttcc tcgccgatcg cggatgaact
     1201 gatttcggag agcgatttta tcgtcgcgtt cggtgcgagc ctgacgcaat ggaccaccaa
     1261 aaatggcaag cttatcgcgc ctggcggcgt ggtcgcccag gtcgatatcg aagtccctag
     1321 gctcggctat cagatgccgg tccggcacgc ggtgcatggc gacgcgaagg cgacggccga
     1381 agcgttgctg gcagagtttg atcgacgcgg catgacgacc gcgcaggctg gccgccgcag
     1441 cgaaacgatg tgcgagcgca ttcgttcggg ggataatcat cattttccgc atccggacga
     1501 gtcgagcgcg cggttcattg atccgcggac attgagcaag gccgtggacg cggttttacc
     1561 ggcggaccgc gtggtcgcgt ctgattcggg ccatttttgc ggctgggtgc cgcgttatct
     1621 tcgcgtgccc gacgcgcgag cctcgtgcct gagccattcc ttccaatcgg tcggccttgg
     1681 cctgccg
//
LOCUS       DATAVD010001443         4065 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2930433, whole genome shotgun sequence.
ACCESSION   DATAVD010001443 DATAVD010000000
VERSION     DATAVD010001443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4065
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2930433"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VHX39_27635"
     CDS             <1..651
                     /locus_tag="VHX39_27635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobT"
                     /protein_id="HEX3994965.1"
                     /translation="SGSMRGRPITVAAMCGDILARTLERCAVKVEVLGFTTRAWKGGQ
                     SREKWVQDGKPRNPGRLNDLRHIIYKAADSPWRRARKNLGLMLREGLLKENIDGEALL
                     WAYRRLLVRPEHRRILMVISDGAPVDDSTLSVNPGTYLEKHLREVIRDIEHRDQVELI
                     AIGIGHDVTRYYRRAVTIVDAEELGGTMMKKLTELFDEDMEAAWVRAAGERAATVM"
     gene            674..832
                     /locus_tag="VHX39_27640"
     CDS             674..832
                     /locus_tag="VHX39_27640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994966.1"
                     /translation="MPTNGVVSASVLLRCRYGGRKAFTSLFSPVEGVDADLHRHDGRG
                     LTATTEAA"
     gene            complement(923..1675)
                     /locus_tag="VHX39_27645"
     CDS             complement(923..1675)
                     /locus_tag="VHX39_27645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HEX3994967.1"
                     /translation="MLLQHQTWQEVETYLTRSKGIILPIGSTEQHGPNGLIGTDAICA
                     EVLAKAVGDSAGAMVGPTIGVGIAVHHMGFAGSMTVKPSTLIAIIHDYVLSLARHGFR
                     RFLFINGHGGNIATVQGAFSEIYAEFEGAFGTAHNDELRCRLANWWDGKVMSDLAKSV
                     FGDDEGSHATASEVALTQYVLPETIKQATLDPARAPSGRFHGPADYRRRFPDGRIGSN
                     PGLATPEKGQRFFETAVPELVKTYNGFIGENA"
     gene            complement(1704..2018)
                     /locus_tag="VHX39_27650"
     CDS             complement(1704..2018)
                     /locus_tag="VHX39_27650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994968.1"
                     /translation="MRQENLKQAAHAREDFRNMTMADVEKRAEHMPWGRPDEVADRLI
                     AEADRAGANTLLVSLNRGAMPHEMFLEQIRRFGREVMPRLQAHEVTSVPIAEAAVASA
                     AE"
     gene            complement(2109..2915)
                     /locus_tag="VHX39_27655"
     CDS             complement(2109..2915)
                     /locus_tag="VHX39_27655"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3994969.1"
                     /translation="MKVFVFDLLAYDRQLDHLKVGNELPYPLSKAHFDAATAARTYEE
                     HLQAWAEMDRLGYDGVGFNEHHTSPYGLMNSPNLMAAAAAQRTKRLKLLIYGNLLHLH
                     EPLRLAEELAMLDCLSNGRLISGFARGIPREYQVHNVPMALSRERFEEAYDIILGAWS
                     DDVFSFTGKYWSYKDVALWPRPVQQPGPPVWMPIVGSRESIEFAARKNIPITPGLAPG
                     GLREDIISLYATIQAKHGRTVTPDHLSIGVSAYVADSKAQAVKENGPYHL"
     gene            3077..3634
                     /locus_tag="VHX39_27660"
     CDS             3077..3634
                     /locus_tag="VHX39_27660"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007400747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar O-acetyltransferase"
                     /protein_id="HEX3994970.1"
                     /translation="MSNEDGSRIIFGRTSESAAMVANVKRAMAITARLNRLTFDDADE
                     IRALFSELIGKTVDERFSLIPPFYTAGGDEIRVGRNVFVNQNCTFYDLGGLDIADDVM
                     IGPNVSIITAGHPLEPSQRRSATIGKPIVIARNVWIAAGATIIGGVTVGENAVVAAGS
                     VVTKDVPPNTLVGGNPARVIRSIGD"
     gene            3706..>4065
                     /locus_tag="VHX39_27665"
     CDS             3706..>4065
                     /locus_tag="VHX39_27665"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3994971.1"
                     /translation="MTTLSDVLETTVLERVASGFVFTEGPLWHPDGFFYFVDIRSNLL
                     YRMVLGQPAEKVRETLGGNGTTFDLRGRLINCEGDGRRMTRTDSDGTVTVLLDRFEGK
                     RLNRPNDVICHSDGSLLF"
BASE COUNT          702 a         1132 c         1429 g          802 t
ORIGIN      
        1 tcgggctcga tgcgcgggcg gccgatcacc gtggcggcca tgtgcggcga catcctcgcc
       61 cgcacgctgg agcgctgcgc tgtcaaggtg gaggtgctgg gcttcaccac gcgggcatgg
      121 aaaggcgggc agagccggga aaagtgggtg caggacggca agcctcggaa tcccgggcgg
      181 ctgaacgacc tgcggcacat tatttacaag gcggcggatt cgccgtggcg gcgggcgcgc
      241 aagaacctcg ggctgatgct gcgcgagggg ctgctgaagg agaatatcga cggtgaggcg
      301 ctgctgtggg cgtatcgccg cctgctggtg cggccggagc accggcggat cctgatggtg
      361 atctccgacg gtgcgccggt ggatgattcg acgctgtcgg tgaacccggg gacctatttg
      421 gagaagcacc tgcgcgaggt cattcgtgac atcgagcatc gcgatcaggt ggaactgatc
      481 gctattggta tcgggcacga tgtgacgcgg tactatcggc gtgcggtcac gatcgtggat
      541 gccgaggaac ttggcggcac gatgatgaag aagctgaccg agttgttcga cgaggacatg
      601 gaagcggcgt gggtgcgggc ggcgggagag cgggcggcga ccgtgatgta ggacgccgcg
      661 ttggtgggcg gttatgccca ccaacggtgt cgtcagcgca tcggtgctgt tgcgttgccg
      721 ttatggcgga cgaaaggcat ttacgtcatt gttttcgcct gtggaaggcg tggatgccga
      781 tctgcatcgg catgacggaa gaggtctgac cgcgacgacg gaagcggcct gaccgtgacg
      841 acggaagggc atgacggaag cggcctgact gtgacgacgg aagggcatga cggaagaggc
      901 ctgaccgtga cgtcgatggc tgtcaggcgt tctcgccgat gaagccgttg taggtcttca
      961 ccagctcggg cacggcggtt tcgaagaacc gctgtccctt ttccggcgtc gccagtccgg
     1021 ggttcgatcc gatccggccg tccgggaagc gtcggcggta atcggccggg ccgtggaaac
     1081 ggccggatgg cgcgcgagcg ggatcgaggg tcgcttgctt gatggtctcc ggcagtacgt
     1141 attgggtcag tgcgacctca ctggccgtgg cgtggctgcc ttcgtcgtcg ccaaacaccg
     1201 acttcgcgag gtcgctcatc acctttccgt cccaccagtt ggccaggcgg cagcgcagtt
     1261 cgtcgttatg tgcggtgccg aacgcgccct cgaattcggc gtagatttcg gagaacgccc
     1321 cctgcaccgt cgcgatgttg ccgccatggc cgttgatgaa caggaagcgg cggaaaccat
     1381 gcctggcgag ggacaacacg taatcgtgga tgatcgcgat cagggtggac ggtttgacgg
     1441 tcatcgaacc ggcgaaaccc atgtgatgaa ccgcgatgcc cacgccgatc gtcgggccga
     1501 ccatggcgcc ggcggagtcg ccgaccgcct tggccagcac ttccgcgcag atcgcgtcgg
     1561 tgccgatcag gccattgggg ccgtgctgtt cggtcgatcc gatcggcagg atgatgcctt
     1621 tggaccgggt cagataggtt tcgacttcct gccaggtctg gtgctgcaac agcatgcgta
     1681 ttctcctgaa atgatcgatg tttttattca gccgcgctcg ccacggcggc ttcggcgatg
     1741 ggaacgcttg tgacctcatg cgcctgtagc cggggcatca cctcgcgccc gaaccggcgg
     1801 atttgttcca ggaacatctc gtgcggcatg gcgccgcggt tcaggctgac cagcagcgta
     1861 ttggcccctg ccctgtccgc ctcggcgatc agccggtcgg cgacttcgtc gggccggccc
     1921 cagggcatgt gttcggcgcg cttttcgaca tccgccatgg tcatattgcg aaagtcctcg
     1981 cgggcgtggg ccgcctgctt caggttttcc tgccgcacgt agtcggtgga gttggcgctg
     2041 acgtagccgt gttcccgctg gatcgcggtc tcggtgaagt tgccgtggct gaacagggtg
     2101 cggttgaact acaggtggta cgggccgttt tccttcaccg cctgggcctt gctgtcggcg
     2161 acataggcac tgacgccgat cgacaggtga tcgggggtga cggtccggcc atgcttggcc
     2221 tggatggtgg cgtagaggct gatgatgtcc tcgcgcaggc cgccgggtgc gaggccgggg
     2281 gtgatgggga tgttcttgcg ggcggcgaat tcgatggact cgcggctgcc gacgatcggc
     2341 atccacaccg gcgggccggg ctgctgcacc ggacgaggcc aaagggcgac atctttgtaa
     2401 gaccaatatt tgccggtgaa ggagaatacg tcgtcggacc aggcgccgag gatgatgtcg
     2461 taggcttcct cgaaccgttc ccgcgacagc gccatcggga cgttgtggac ctggtattcg
     2521 cgcgggatgc cgcgtgcgaa gccggagatc agccggccgt tggacaggca gtcgagcatc
     2581 gccagttcct cggcgaggcg cagcggttcg tgcaggtgca gcaggttgcc gtagatcagc
     2641 agtttcaggc gtttggtccg ctgcgccgcc gcggccgcca tcaggttggg cgaattcatc
     2701 agaccgtagg gcgaggtgtg atgttcgttg aagccgacgc cgtcgtagcc gaggcgatcc
     2761 atttccgccc acgcctgaag gtgttcttcg taggtgcgag cggcggtggc ggcgtcgaaa
     2821 tgcgctttgg acagcgggta tggcagttcg ttgccgacct tgaggtggtc gagttgccgg
     2881 tcgtaggcca gcaggtcgaa gacgaagacc ttcatcgcag cgttctttcc tccagcaccc
     2941 agcgtatcgc ggttgtcgtc aggtgtggca gatcggcgat catgtgtgaa gggtcggtcc
     3001 ggattccggc caagccgctt tgtggctata ctcgacggat cttgagcgtc cgtgtgtcgc
     3061 cggaggaaaa ttacgtatgt cgaatgagga cggcagcaga atcattttcg gcagaacgtc
     3121 ggaatcggcc gccatggtgg cgaacgtcaa acgggcgatg gcgatcactg ccagactgaa
     3181 tcgtttgacg ttcgacgatg cggacgaaat tcgcgccttg ttcagcgaac tgatcggcaa
     3241 aaccgtggac gagcggtttt cgctgatccc gcccttctat accgctggcg gagatgaaat
     3301 ccgtgtcggg cgcaatgtct tcgtcaacca gaactgcacg ttctatgacc tcggcggtct
     3361 cgatatcgcg gacgatgtga tgatcgggcc gaacgtgagc atcatcacgg cgggccaccc
     3421 gctggaacct tcgcagcgcc gcagcgccac aatcggaaag cccatcgtca ttgcgagaaa
     3481 cgtctggatc gcggccggtg cgaccatcat cggtggcgta acggtcggcg agaacgcggt
     3541 cgtggcggca ggttccgtgg tcaccaagga tgttcctccc aatacccttg tcggaggaaa
     3601 tccggcgcgc gtcattcgtt cgatcggcga ctgaggagac ctccctcggg ttggcatcgg
     3661 atgccggtgg ggtgtttact gcgggcagaa aaagcggagg aagcgatgac aacattgtcc
     3721 gacgtcctgg aaaccacggt gctggaacgc gttgcgtccg ggttcgtgtt caccgagggg
     3781 ccgctgtggc atcctgatgg gttcttctac ttcgtcgata tccgcagcaa cctgctgtat
     3841 cgcatggtgc tggggcaacc ggcggagaaa gtccgggaaa cgcttggcgg caacggcacg
     3901 acgttcgatc tgcgcgggcg cctgatcaat tgcgaaggcg atggacgccg gatgacacga
     3961 actgacagcg atggaacggt aacggttctg cttgatcgtt tcgaggggaa gcggctcaac
     4021 cgtcccaacg acgtgatctg ccattccgac gggtcgctgc tgttc
//
LOCUS       DATAVD010001444         4796 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3487150, whole genome shotgun sequence.
ACCESSION   DATAVD010001444 DATAVD010000000
VERSION     DATAVD010001444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4796
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3487150"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1084)
                     /locus_tag="VHX39_27670"
     CDS             complement(<1..1084)
                     /locus_tag="VHX39_27670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3994972.1"
                     /translation="MNNITIQVANPMTSQMMEGPCPAAAADPDERLHAAQGKFTFGLS
                     ASSFAMAFQDWFTHLANAPGRQLELTRLAARQWTRWAGAACGGTAIQAAEGDHRFHDA
                     AWQQPPFAAVSQAFLLAEAWWAEATSALPGVTAANQRMVAFAARQMMDMASPSNVALL
                     NPEVLTAALRSGGKNFVDGAENLVTDLQEMLSGRACGKDAFRIGTDLAATPGKVVLRN
                     ELIELIQYEPVLPKVRREPVLIVPAWIMKYYILDLSPENSLIRYLVAQGHTVFAISWR
                     NPDAAMRETTLDDYRRLGVMDAIDAVSDICAGANIHACGYCLGGTLLSIAAAAMARDG
                     DERLASVTLLCAQTDFTEAGELQLFIT"
     gene            complement(1149..1859)
                     /locus_tag="VHX39_27675"
     CDS             complement(1149..1859)
                     /locus_tag="VHX39_27675"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3994973.1"
                     /translation="MSHQSAAVVGSIDDGRFDGAVHPVAGPAFRESDVPFRHGLVHAY
                     AAGTGIYAEGDGAERFYKVLSGVARTCRYLGDGQRQVDAFYWPGDLFGFEPDGQYRLT
                     AEAVGDCTLVAYPRLRCVIQDAAEYRCASQLLDYALRGIERAQEHALLLGRRCALSKL
                     AGFLLQYDSHRPGHRFIELVMNRQDIADYLGVTIETVSRSFTQLEHDAVIAMPAAKRI
                     AILNRARLRRIAEQSGSA"
     gene            complement(1975..2589)
                     /gene="fixJ"
                     /locus_tag="VHX39_27680"
     CDS             complement(1975..2589)
                     /gene="fixJ"
                     /locus_tag="VHX39_27680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0045893 - positive regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator FixJ"
                     /protein_id="HEX3994974.1"
                     /translation="MARDAVIHLIDDDAAVRRAVAFLLTSAGYAVRVYESAEAFLLSD
                     STLQPGCVITDVRMPGMDGLELQRTINARRMPFPVIVLTGNGDVPLAVEAMKAGAVDF
                     IEKPFDDDVLLAAITTAVDRHAKALDHHAEMAAIGSKMATLSVRESEVMDGLIAGHPN
                     KVIGFDLGISVRTVEVHRANLMMKMGAGSLSELVKMAFVARSGI"
     gene            complement(2579..4450)
                     /locus_tag="VHX39_27685"
     CDS             complement(2579..4450)
                     /locus_tag="VHX39_27685"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX3994975.1"
                     /translation="MAEAGLEVMRRAMEAAGLGVWWWKPADGAVFLSEEAALLLGCGV
                     EGMHDYAAVLLLLHAEDREPIDQELHACVARGGSFDVDFRVARPGAAAAWIRALGKAE
                     ATEGGEPEIRGILIDVARRKMAEEATSRLAAIVTSSDDAIVGKTLDGVVTDWNRGAEV
                     VFGYEAGEMVGRPISLLLPPGQEDETTQILNRIRRGERVEHYETRRRRKDGAIIDVAI
                     TVSPVHDGYGRLLGASKVARDITGAKRAEAALREREAHLQSVLDTVPDAMVVIDPHGV
                     IQSFSQTAGRMFGYAASEVIGKNVRILMPDPDRLRHDEYLRHYLETGEKRVIGRGRVT
                     TGRRKDGSNFPMDLSVGEMASGDGHFFTGFVRDLTERQSAQQQLQDLQAELIRMSRYT
                     AMGEMASTLAHELNQPLTAVASYLNGIRRLLKRGQDVEQGVLLDAVERAAAQTLRAGQ
                     IIRRLRAFVSRGETERNIENLAKLIEEASVLALVGVKEAGVRSAFLLGAETVLVLVDK
                     IQIQQVVLNLIRNAIEAMQEVQNRELTVAIETLPNTMAKVSVADTGPGLPPDIAEHLF
                     QPFMTTKREGMGVGLSISRTIVEAHGGRLWAEPNPAGGTVFCMTLRVFQAEGATHGA"
     gene            complement(4508..>4796)
                     /locus_tag="VHX39_27690"
     CDS             complement(4508..>4796)
                     /locus_tag="VHX39_27690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994976.1"
                     /translation="GPGQVVGAAVSPGQVVGLADFGRRAVVALVVLTALVTRVMRGLS
                     CVLGNSVAGSPGVRRRSRGDGDGFDLAQVREDGGEAVSGVRPGLNLLVRAV"
BASE COUNT          883 a         1744 c         1341 g          828 t
ORIGIN      
        1 cggtgatgaa aagttgcagc tcgccggcct cggtgaaatc ggtctgggca cacagcagcg
       61 tcacgctcgc cagccgctcg tccccatcgc gcgccatcgc cgccgccgcg atcgacagca
      121 atgtgccacc gaggcaatac ccgcaggcat ggatgttcgc cccggcgcag atatccgaaa
      181 ccgcatcgat cgcgtccatg acgccaagcc gccggtaatc gtccagcgtc gtctcgcgca
      241 tcgccgcatc cgggttgcgc caggaaatcg caaacaccgt gtgcccctgc gcgaccaggt
      301 agcggatcag ggagttttcc ggcgacaggt ccagaatgta atacttcatg atccacgccg
      361 gcacgatcag caccggctcc cgcctgacct ttggcagcac aggctcgtat tggatcagct
      421 cgatcagttc attgcgcagc accaccttgc cgggcgtggc cgccaggtcg gtcccgatcc
      481 tgaacgcgtc cttgccgcac gcccgtcccg acagcatctc ttgcaggtcc gtgacaagat
      541 tctcggcacc gtccacgaag ttcttgccgc cggaacgcag cgcggccgtc agcacctcgg
      601 gattgagcag cgccacgttc gacggcgacg ccatgtccat catctgccgg gcagcgaacg
      661 cgaccatccg ctgatttgcc gccgtgacac ccggcagcgc ggaggtggct tccgcccacc
      721 acgcctccgc cagcagaaac gcttgcgaca ccgcggcaaa tggcggctgc tgccaggcag
      781 cgtcatggaa gcgatggtcg ccctccgcgg cctggatcgc ggtgccgccg catgccgcac
      841 ccgcccatcg cgtccattgc cgcgcggcaa gtcgcgtcag ctcaagctgc cggccgggcg
      901 cattcgccag atgggtgaac cagtcctgga atgccatcgc gaaactggat gccgataggc
      961 cgaaggtgaa tttgccctgc gccgcgtgca gcctctcatc cggatcggcg gcggcggcgg
     1021 ggcagggacc ctccatcatt tgcgatgtca tcggattcgc aacttgtatc gtaatgttgt
     1081 tcatcgtcca cttgtcccaa atatctggcg cgtctctttc gcaacccaca ggcgacaccg
     1141 cgccatgatc aggcactgcc ggattgttcc gcgatccgcc gcagtctcgc ccgattgagg
     1201 atggcaatgc gtttcgccgc cggcatggca atcaccgcgt catgctccaa ctgcgtaaaa
     1261 cttcgagata ccgtctcgat cgtcacgccg aggtagtcgg cgatatcctg ccggttcatc
     1321 acgagttcga tgaagcggtg tccgggcctg tggctgtcgt attgcagcag gaagcccgcg
     1381 agcttgctca gcgcgcagcg ccgccccaac agcaaagcgt gctcctgcgc ccgctcgatc
     1441 ccgcgcagcg cgtaatcgag cagttgcgac gcgcagcgat actccgcggc gtcctggatg
     1501 acgcaacgca gacgcggata cgcaaccagc gtgcaatcac cgacggcctc ggccgtcagc
     1561 cggtactggc catccggctc gaagccaaac agatcgccgg gccagtagaa tgcatcgacc
     1621 tggcgctggc cgtcaccgag gtaacggcac gtacgggcca caccgctcag aaccttatag
     1681 aaacgttcgg ccccatcgcc ttcggcgtat atccccgtcc ccgcggcata cgcatgaacc
     1741 agcccatggc ggaacggaac atcactttcc cgaaacgccg ggcctgcgac cgggtgaacg
     1801 gcaccgtcga accggccatc gtcgatcgac cccacaaccg ctgcactctg atgtgacaat
     1861 gagcctctcc ctctgaaaag cttgcatcat cagaatggga cgctccgttc accggcgaaa
     1921 ttggataatg ttctaaggga ttctacgtac cccgggaccg ggccgaaccg ccgctcaaat
     1981 tcccgaccgc gcgacgaacg ccatcttgac gagttccgaa aggctgccgg cacccatctt
     2041 catcatcagg ttggcccgat ggacttccac tgtccgtaca ctgatcccca gatcgaagcc
     2101 gataaccttg ttcgggtgac cggcgatcaa gccgtccatg acctcgctct cccgaaccga
     2161 gagtgttgcc atcttcgatc cgatcgcggc catctcggcg tgatgatcca gcgccttggc
     2221 atgccggtcg accgcggtcg tgatcgccgc cagcagcaca tcgtcgtcga acggcttttc
     2281 gatgaaatcg accgcacccg ccttcatcgc ctcaaccgcc agcggcacat ccccgttgcc
     2341 ggtcagcacg atgaccggaa acggcattcg ccgcgcattg atcgtacgtt gcagttccag
     2401 gccatccatg cccggcatgc gaacatcggt gatcacgcat cccggctgca gcgtcgagtc
     2461 cgacagcaga aacgcctccg ccgattcata gacccgcacc gcatagccgg ccgacgtcag
     2521 aagaaaggcc acggcccgcc gcacggccgc gtcgtcgtcg atcaggtgga taaccgcatc
     2581 acgcgccatg ggtcgcgccc tcggcctgga acacacgcag cgtcatgcag aaaaccgtcc
     2641 cgccggcggg gttcggctca gcccagagcc gcccgccatg cgcctccacg atggttctgg
     2701 agatggaaag acccaccccc attccttccc gcttcgtcgt catgaatggc tggaacagat
     2761 gctcggcgat atcgggggga agtcccggcc cggtgtcggc cacgctgacc ttggccatgg
     2821 tgttcggcaa tgtctcgata gcgaccgtca gttcgcggtt ctgcacctcc tgcatggctt
     2881 cgatcgcgtt gcggatcaga ttcagaacga cctgttgtat ctggatcttg tctaccagca
     2941 ccaggaccgt ctcggcaccc agcagaaacg cacttcgtac ccccgcttcc ttcacaccga
     3001 ccagcgccag gacactggct tcctcgatca acttggccag gttttcgatg ttgcgctccg
     3061 tttccccgcg tgagacgaac gcgcgcaagc gacggatgat ctgccccgcg cgcaaggtct
     3121 gcgccgccgc acgctcgaca gcgtcgagga gcacgccctg ttcgacatcc tgtccgcgct
     3181 tcaaaagccg tctgatgcca ttgagatagc tggcaaccgc cgtcaacggt tggttcaatt
     3241 catgcgccag ggtcgacgcc atttcgccca tcgcggtgta gcgggacatg cggataagtt
     3301 ccgcctgcag atcctgaagc tgctgctgcg cactctgccg ctccgtcagg tcgcgcacga
     3361 acccggtgaa gaaatgaccg tcgcccgatg ccatctctcc gacggacagg tccatcggaa
     3421 agttcgagcc gtccttccgc cgccccgtgg tcacccggcc gcgtccgatg acccgtttct
     3481 cacccgtttc gaggtaatgc cgcagatact catcgtgccg cagccggtcc ggatcgggca
     3541 tcaggatacg cacatttttg ccgatcacct cgctggccgc atagccgaac atccgccccg
     3601 ccgtctggct gaacgactgg atgacgccgt gcgggtcgat gacgaccatc gcgtcgggca
     3661 cggtatccag caccgattgc agatgcgcct cgcgctcccg cagcgccgcc tcggcacgct
     3721 tggcgccggt gatgtcccga gcgactttcg aggcacccag aaggcggccg taaccgtcat
     3781 gaaccggtga gacggtgatt gccacatcga tgatcgcgcc gtccttgcgc cggcggcggg
     3841 tttcgtaatg ttcgacccgt tcgccacgcc tgattcggtt gaggatctgg gtcgtctcgt
     3901 cctcctggcc gggtggaaga agcagcgaaa tcggccggcc gaccatctcg ccggcctcgt
     3961 agccgaagac cacctccgca ccccggttcc agtcggtaac cacgccatcc agcgtcttgc
     4021 cgacgatggc gtcgtccgag gaggtcacga tcgccgcaag ccggctggtt gcctcctccg
     4081 ccatcttgcg gcgggccacg tcgatcagga tgccgcgaat ttcgggctca ccaccctctg
     4141 ttgcctctgc cttgcccagc gccctgatcc aggcggccgc cgcccctgga cgcgcgaccc
     4201 ggaaatcgac gtcgaagctg ccccctcgag ccacgcaggc gtgcaattcc tggtcgatcg
     4261 gctctcgatc ctccgcatgg agaagcaaca gcacagcggc gtaatcgtgc atgccctcca
     4321 ccccgcagcc cagcagcaac gccgcctcct cggacagaaa gacggcgccg tccgccggct
     4381 tccaccacca gacacccagc cccgccgcct ccatcgcgcg gcgcatgacc tccagacccg
     4441 cctccgccaa tgcattgctc ccgttgctct ctccggtccc tgacgactgt gccgggctgc
     4501 ccatccttca caccgcccgc accagcaaat tcagccccgg ccggacgccg gacactgcct
     4561 cgccgccatc ctcgcggact tgcgccagat caaacccatc accatccccg cgtgatcgtc
     4621 tccgcacgcc gggcgatccg gcgaccgaat tccccaggac gcaagacagg cctcgcatca
     4681 cacgcgtcac cagcgccgtc agcacaacca aagccaccac cgcccgacgc ccgaaatcag
     4741 ccaatcccac cacctgtcca ggactcacag ccgcccccac cacctgtcca ggaccc
//
LOCUS       DATAVD010001445         3103 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2560604, whole genome shotgun sequence.
ACCESSION   DATAVD010001445 DATAVD010000000
VERSION     DATAVD010001445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3103
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2560604"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..418
                     /locus_tag="VHX39_27695"
     CDS             <1..418
                     /locus_tag="VHX39_27695"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HEX3994977.1"
                     /translation="YGVYDIVDRVLVFAAAGHHAAYLLPADNIAWPALPLDTQNPIVG
                     MLPDPAIATADVEVPPGATLHLFSDGVFEIVDREGRQLGLDDILPMLPSVNNAGWAEG
                     DTVTPDEPRKLYDRIRAIARPGQLDDDFSALVFRFP"
     gene            482..1288
                     /locus_tag="VHX39_27700"
     CDS             482..1288
                     /locus_tag="VHX39_27700"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3994978.1"
                     /translation="MVQSQRILLIDTEEIIPGVTKLNLRGRLDAPGAQIIDTAFARMA
                     RAQERLIVDLSRVSFIASAGLRTLIAGARSLLARQGRMVCLDPDPLVEQVLVRSGVDR
                     LIPVCREISEAVRVVSVGGGAGRGDPEDEPLPFDLEVERTMAGVRRVGAWVDELAILL
                     NLSGETEYALRLCLEEAVTNIVNHAIPQPDIDNDSVALHLLANASTMRLTIEDHCGAF
                     NPLGAPLPEPDSPAPEGEGGLGITLLRRHADQVAWEYTGTANRLSIQLPR"
     gene            complement(1313..2368)
                     /locus_tag="VHX39_27705"
     CDS             complement(1313..2368)
                     /locus_tag="VHX39_27705"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX3994979.1"
                     /translation="MSSALQAIATRHGRWAAWLVPAIYGGCIAAFIADLTSSSTLAFG
                     VFYAPLIATAVYYQNKQAVWVLTAIACAMNVTGAFFPDIANDVPGLVENRVLSTLALL
                     ATAAFTWHARSIQDQLAEQTSRAEAAERIKTEVLSNLSQEIRAPLHSMIGILELVATD
                     TRPEQQAAFQMVRSSGRRLLMTVDNLVDLTQFEATSMPAEPVNLGSLLRQTAEAKRSD
                     ASARQINLTINIPSDGDTMVQANPWAARRILENKIADAISYTAPGGQIAISTDTEPDD
                     CSAVISTTSIWPPGAFRLTSDAASNLLTPSVMGLALSHRLAGAMNARLVVSNEPGEGT
                     TVRLRLPAVARPGTEPA"
     gene            complement(2435..2941)
                     /locus_tag="VHX39_27710"
     CDS             complement(2435..2941)
                     /locus_tag="VHX39_27710"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEX3994980.1"
                     /translation="MALDALWEEYDGRGVPMACTIGRFHTDVKQHGLTIVPGTFHFCL
                     DVRAYDEAVLAELDKRVDAIIAGIEQRRGVHFHTGSKARAAVGPVDAGIKVALSCAAA
                     SVGIQTIDLGSPASHDAAAFAACGVKMGLIFVRNANGSHNANESMTIDDFLDGSAVLT
                     EWLATQSI"
BASE COUNT          575 a          952 c          960 g          616 t
ORIGIN      
        1 gtacggtgtc tacgacatcg tcgatcgcgt gttagtcttt gccgctgccg gccaccacgc
       61 tgcctatctg ctgcctgccg acaatattgc ctggcccgcg ctgccgttgg acacgcagaa
      121 ccccattgtc ggtatgctgc ctgatccggc gattgccact gctgatgtcg aggtgccacc
      181 cggcgccaca ttgcatctgt tcagcgatgg cgtgtttgaa atcgtcgatc gggagggccg
      241 ccaactcggc ctggacgaca tcctgccgat gctgccatcg gtcaacaacg cgggatgggc
      301 ggaaggtgat accgtcacgc ccgacgaacc aaggaaactg tatgaccgga tccgggcgat
      361 cgcacgtccg ggccaactgg acgacgattt ttctgcgctg gtgttccgct tcccatagag
      421 gcccgaatgc gccaaggtat cggttgctcg gacggtttcc ctcgtccgac gggagacaca
      481 gatggttcaa tcgcaacgca ttctgctgat cgacaccgaa gagatcatcc caggcgtcac
      541 gaaactcaat cttcgtggcc ggctggatgc gccgggtgcg cagatcatcg acaccgcatt
      601 cgccaggatg gcgcgggcgc aggagcggct gatcgttgat ttgtcacgcg tgagtttcat
      661 tgcgtctgcc gggttgcgca ccttgatcgc cggggcccga agcctgctgg cgcgccaggg
      721 caggatggta tgcctcgacc ccgatcctct ggtcgagcag gtgctggttc gcagtggcgt
      781 cgacagactg atcccggttt gccgggaaat ctccgaagcg gtgcgcgtgg tcagtgtcgg
      841 cggcggcgct ggccgtggcg accccgagga tgagccactg ccgttcgacc tggaagtgga
      901 gcgcaccatg gccggtgtcc ggcgcgttgg agcctgggtt gacgaactgg cgatcctgct
      961 caacctgagt ggggagaccg agtatgcgct tcgcctgtgt ctggaggagg cagtcaccaa
     1021 catcgtcaac catgccatcc cccagcctga catcgataat gacagtgtcg cgctgcattt
     1081 gttggccaac gcaagcacaa tgcgcctgac aatcgaggat cattgtggcg cattcaaccc
     1141 actcggggca ccgctgcccg agccggacag tcccgccccg gagggcgagg gcggcctggg
     1201 tattaccttg ttgcgccgac acgccgatca ggtggcctgg gagtataccg ggacggccaa
     1261 ccggctgtcg attcagttgc cgcggtaggc tgcttcatcg tccgcccgct ggctacgcgg
     1321 gttccgtccc cggacgggcc accgccggaa gtcgcaggcg cacggtcgtt ccctctccgg
     1381 gctcattgct gacgaccagc cgcgcgttca tcgcgcccgc gaggcgatga ctgagtgcca
     1441 gccccatgac cgaaggcgtc aacaggttgc tcgcagcatc gctggttaat ctgaacgctc
     1501 ccgggggcca tatacttgtg gtcgaaataa cagcggagca atcgtcaggt tcggtgtccg
     1561 tgcttatcgc aatctggccg ccaggggcgg tgtagctgat tgcgtcagca attttgttct
     1621 caagaatccg gcgtgccgcc cagggattgg cctgcaccat ggtatcgccg tcagatggaa
     1681 tattaatcgt cagattgatc tggcgcgccg aggcatccga acgtttggct tccgccgttt
     1741 ggcggagcag cgagccaaga ttgaccggct ccgccggcat cgatgttgct tcgaactgag
     1801 tcaggtccac gaggttgtcg actgtcatca aaagtcggcg tccggagctg cgcaccatct
     1861 gaaatgccgc ctgttgctca ggtcgagtgt ccgttgccac aagttccaga atcccgatca
     1921 tcgaatgcag cggtgcccgg atttcctggc tgagattgga cagcacttcg gttttgatgc
     1981 gctcagctgc ttccgcacgg ctggtttgct cggcgagttg atcctggatc gagcgcgcat
     2041 gccacgtgaa cgctgcggtc gcaagcaacg ccaaagtcga caacacgcga ttttccacca
     2101 atcctggcac atcgtttgcg atgtccggga aaaatgcccc ggtgacgttc atggcacagg
     2161 cgattgcggt cagcacccag acggcctgct tgttttgata atacaccgcg gtggcgatga
     2221 gtggcgcgta aaagacgccg aacgccaacg tgctggatga ggtcaggtcg gctatgaacg
     2281 cggcaatgca gccgccataa atggctggta ccagccacgc agcccatcgg ccatggcggg
     2341 tagcaatcgc ctgcagtgca ctgctcatag aggcgtggtc atgtgtgatc agccatcggg
     2401 tccagcgtgg aggggtcacc gcttcacctt agcctcaaat gctctgcgtc gcgagccatt
     2461 ccgtcaaaac cgcgctcccg tcaaggaaat cgtcaatcgt catcgattca tttgcattat
     2521 ggctgccatt cgcgttcctg acaaaaatca atcccatttt cacgccgcaa gccgcaaagg
     2581 ccgcggcatc atgcgacgcg ggactgccga ggtcgatggt ctggatgcca accgacgccg
     2641 ccgcgcagga gagcgctact ttgataccgg catccaccgg gcccaccgcg gcgcgcgctt
     2701 tgcttccggt gtggaaatga actccgcggc gttgctcgat acctgcgatg atcgcgtcca
     2761 cacgcttgtc cagttctgcg agcaccgcct cgtcgtaagc ccggacatcc agacagaaat
     2821 ggaaagtgcc gggcacgatg gtcaggccat gctgtttcac gtcggtgtga aagcgtccga
     2881 tcgtgcaggc catggggacg ccgcgcccgt catactcttc ccacaacgcg tccagcgcca
     2941 tcgcgaattc ggcgccagcg agcgcggcgt cgcggcgaaa ccgtcgtggc aacccgacat
     3001 ggtcgttgct gccttcgatc cacgcactcg ggtaacggaa gttgccggga atgccggtgc
     3061 cgatgccgac cgagcaaccg gcttcgataa gcgaaggcgc ttg
//
LOCUS       DATAVD010001446         2202 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3675503, whole genome shotgun sequence.
ACCESSION   DATAVD010001446 DATAVD010000000
VERSION     DATAVD010001446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2202
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3675503"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1169)
                     /locus_tag="VHX39_27715"
     CDS             complement(<1..1169)
                     /locus_tag="VHX39_27715"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3994981.1"
                     /translation="MDFRLTEEQECLRQRCLLLAADFAERSAEHDRDASHPTENYDRL
                     RAEGFLALTVDASLGGAGFDFLSHTIAYEALGQGCPATALAFNMHASVVMPLLQSPDV
                     TPQAKQYLADLVVRQGKMIGGNFSEPGTTSLIGERGLSVRARPVEGGYSISGRKMFAS
                     MLEATDYVLVLVYPEEAGSKTAGMLVLIPRDAPGRGVNANWDTLGMRATRSDSLVLDD
                     CFVPKSAVLYRSDDIRSFRHAYLNWFWGSYTAVYLGLAVAAYDEIRRVVKARQPPGYA
                     QPLAFHPDVRRHIATMSATLEAARLVTYRSAWLSDTQGPTAETTAALYRAKYLVGEAV
                     SSITRTALTLGGAHGIFKGSRLEQLFRDGALAEIQPPPTDFCLWNMGVHELGLDPA"
     gene            complement(1232..2149)
                     /locus_tag="VHX39_27720"
     CDS             complement(1232..2149)
                     /locus_tag="VHX39_27720"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3994982.1"
                     /translation="MALKDQIPFGMSLPHRSPDTIGVDVVRAVATKADALGFRDLWVT
                     ENTLDHVNSFDPLTVLTYAAGITSRIGLGASVLVLPVHDPRMVAHQWATLDYVSGGRA
                     IMGVGIGRPFHFEEFEVPQEGRVARFREQIDLIRTLWSQEKVEHKGSFYHLEGTKLGV
                     RPVQQPLPIWMGVGHPNAIRRAAGIADGWMGAGGSTSEDFRRAVPLLREALEKAGRDP
                     NGFPISKRIFIAVDEKPDIARAELNRWYTEVYRNPPGTDTSGIHGTPEQVRERLQEMI
                     GQGANHLLLNPVSRHVEQLHALAEVVGLS"
BASE COUNT          423 a          749 c          637 g          393 t
ORIGIN      
        1 gccgggtcaa gtcccagttc gtggaccccc atgttccaca ggcaaaaatc cgtcggtggc
       61 ggttggattt ccgccaacgc gccgtcgcgg aacaactgct ccagccgtga tcccttgaag
      121 atcccatgcg cgccgcccaa cgtcagcgcc gtcctcgtga tactgctgac cgcttccccc
      181 accagatatt ttgcccggta caacgcggcg gtcgtttcgg ccgtgggccc ctgcgtgtcg
      241 ctcagccagg cggaccgata cgtaacgaga cgcgcggcct ccagcgtcgc actcatcgtc
      301 gcgatatgac ggcgaacatc cggatggaac gccaacggct gcgcatagcc gggcggctgg
      361 cgtgccttca ccacgcggcg gatttcgtcg taggcggcca ccgccagacc gagatagacg
      421 gcggtgtacg aaccccagaa ccagttcagg taggcatggc ggaacgacct gatatcatcc
      481 gatcggtaca acaccgccga cttcggcacg aagcaatcat ccagcaccag cgaatcactg
      541 cgcgtcgccc gcatccccag cgtatcccag ttcgcattca ccccgcgtcc gggcgcatcg
      601 cgcggtatca gcaccagcat gccggccgtc ttgctgcccg cctcttccgg atagaccagc
      661 accagcacgt aatcggtcgc ttccagcatg gaggcgaaca ttttacgccc gctgatgctg
      721 tacccgccct cgacgggccg agcgcggacc gacaatccgc gttcgccgat caaggaggtc
      781 gttccgggtt cggagaagtt gccgccgatc atcttgccct ggcgcaccac cagatccgca
      841 agatattgtt ttgcctgtgg tgtgacatca gggctttgca acagcggcat cacgaccgag
      901 gcgtgcatgt tgaacgccag tgccgttgcc ggacatccct gccccagcgc ctcataggcg
      961 atcgtgtgac tgaggaaatc aaaacccgca ccgccaagcg acgcgtcgac cgtcagtgcc
     1021 aggaagccct cggcgcgcag cctgtcgtaa ttctccgtcg ggtgggaggc atcgcggtcg
     1081 tgttccgccg accgctcagc gaaatcggcg gccaacagca gacagcgttg ccgcaggcac
     1141 tcctgttcct cggtgagacg gaaatccacg ggctggccct cctgccgagg accagcttaa
     1201 ccgggatcgc gcggccgtat agacagcgcg ttcacgacag cccgacgacc tccgccaagg
     1261 cgtggagctg ctcgacatgg cgggacacag ggttcagcag caaatggttg gcgccctggc
     1321 cgatcatttc ctgcagcctt tcccgcacct gctccggcgt tccatggatg ccggaggtgt
     1381 cggtgccggg gggattgcgg taaacctcgg tataccaacg attcagttct gccctggcga
     1441 tatccggctt ctcatccacc gcgatgaaga ttcgtttcga gatcgggaaa ccgttcggat
     1501 cgcgaccggc tttttccagc gcttcccgca gcagcggcac ggcacgccga aaatcttcgc
     1561 tggtcgaccc gcccgcaccc atccaaccat cggcaatccc agccgctcgg cggatggcat
     1621 tcgggtgccc gacacccatc cagatcggca gtggctgctg caccggacgc acacccagtt
     1681 tcgtcccctc aagatggtag aagctgcctt tgtgctcgac cttctcctgg ctccaaagcg
     1741 tccggatcag atcgatctgc tcccgaaacc tggcgacgcg gccttcctgg ggaacctcga
     1801 actcctcgaa gtgaaacggc cgcccaatcc ccacgcccat gatcgcccgg ccgccgctga
     1861 cgtaatccag cgtcgcccat tgatgcgcga ccatgcgcgg atcatgcacc ggcaggacca
     1921 gcaccgaagc gccaagaccg atccggctgg tgatccccgc ggcataagtc agcacggtca
     1981 gcggatcgaa ggaattgaca tgatccagcg tgttttccgt cacccacagg tcacgaaacc
     2041 ccagcgcatc cgccttggtg gcgaccgcgc gaaccacgtc cacaccaatg gtgtcaggcg
     2101 atcgatgcgg cagcgacatg ccgaatggaa tctgatcttt cagtgccatt agacgaatcc
     2161 tagcagcctg tcggagttag tttggggatg tttggtgggg ga
//
LOCUS       DATAVD010001447         3139 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3487276, whole genome shotgun sequence.
ACCESSION   DATAVD010001447 DATAVD010000000
VERSION     DATAVD010001447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3139
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3487276"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /locus_tag="VHX39_27725"
     CDS             complement(<1..233)
                     /locus_tag="VHX39_27725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994983.1"
                     /translation="MTERYVPVGWNVSKIVYDVVALVAIGGYIGVFLWVAPAFQHVTL
                     PLDDYTMRMNAFGTCAFLLLSVILSIGPAARVDP"
     gene            complement(230..373)
                     /locus_tag="VHX39_27730"
     CDS             complement(230..373)
                     /locus_tag="VHX39_27730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994984.1"
                     /translation="MRRRHRDVHRLAWLVLVFLLPVIVLLALMLRPIGPTEAPQIQLA
                     PPK"
     gene            complement(370..573)
                     /locus_tag="VHX39_27735"
     CDS             complement(370..573)
                     /locus_tag="VHX39_27735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994985.1"
                     /translation="MAAAIIVDCATAWLAIGVLVGVAFLFLGIDRVDNAARGAYAFRP
                     LLLPGLVLLWPFVALRWYLLARP"
     gene            complement(579..>3139)
                     /gene="polA"
                     /locus_tag="VHX39_27740"
     CDS             complement(579..>3139)
                     /gene="polA"
                     /locus_tag="VHX39_27740"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014105596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEX3994986.1"
                     /translation="VIFDAGRFTFRNRLYEAYKAQRPPAPEDLVPQFILTREATEAFG
                     VPAIELTDWEADDLIAAYARAAEDQRWRTTIVSSDKDLMQLIRPGVMMMDPLKQKPIG
                     PAEVMEKFGVTPDKVIEVQSLIGDSTDNVPGVPGIGPKGAAQLIGEFGNLEAVLAAAP
                     SMKPSKRRDALIEHAEKARISRVLVTLREDAPLPLPLDALVVKQPDTVHLAAWLAAQG
                     FRSTIARLGLGGAAQVAEAPKPADAPPVPASDVDFGNYESVTTGEALRVWADAARAAG
                     CFALDTETDGLDAMRASLVGLSLATAAGHACYVPLRHDVLAEQVAVADAIAVLGPLFG
                     DPAILKILQNAKFDMMVLARAGFPPLTPIDDTMLISFAQDAGAHGHGMDELSRLHLGH
                     TPIPYDQVTGTGRNRISFANVPIHNATAYAAEDADVTLRLWACLKPRLRANHALALYE
                     QVERRLVPVLLDMERAGIKVDADDLRRMSVDFEQRMAVMEKDCHRLAGFEFNVGSPKQ
                     LGEVLFDKMNLPGGKRMKTGAWGTDSSVLQGLADQGHELPGRILEWRQLQKLKSTYAD
                     ALVEQINPETGRVHTSYAMAIAQTGRLSSTDPNLQNIPIRTEEGSRIRHAFVAEPGNV
                     LVSADYSQIELRLLAHVADIPALKESFARGEDIHARTASEVFGIPMEGMDPMTRRRAK
                     AINFGIIYGISGFGLARQLGIGQGEALGYIKRYFERYPGIRDYMEHARSVAKEKGYVT
                     TPFGRRCWISGINDKMQARRSYAERQAINAPLQGGAADIIKRAMVQLPPVLARECPSA
                     RMLLQVHDELLFEVPEADAPGLAGVAARVMESAATLSVPLVVETGTGHSWAAAH"
BASE COUNT          603 a         1030 c          974 g          532 t
ORIGIN      
        1 ggatccacgc gcgcggccgg cccgatcgac aaaatcaccg acagcaacag gaacgcacag
       61 gtgccgaacg cgttcattcg catcgtgtaa tcgtcgagcg gtaacgtcac atgttgaaac
      121 gccggagcga cccacaggaa gacaccgatg tatccgccga tcgccaccag cgcgacgaca
      181 tcgtagacga tcttgctgac gttccagccg accggaacgt aacgctcggt catttcggtg
      241 gtgccagttg gatttgcggt gcctcggtcg ggccaatggg gcgcagcatc agcgccagca
      301 gcacgatcac cggcagtaag aacaccagca ccagccaggc caggcgatgg acgtcgcgat
      361 gacgccgtct catggccgcg ccagcaggta ccagcgcagc gcaacgaatg gccacagcag
      421 caccaggccg ggcagcaaca atggccgaaa cgcgtaggcg ccgcgcgcgg cgttatccac
      481 ccggtcgatc ccgaggaaca gaaacgccac gcccacgagg acgccgatcg ccagccaggc
      541 cgttgcgcaa tcgacaatga tcgcggcggc cattgccgtc agtgcgccgc ggcccaggag
      601 tggccggtgc cagtttctac gaccaaagga acggacaggg tggcggcaga ttccatgacg
      661 cgggcggcaa cgccggccaa cccgggtgca tcggcctcgg gtacctcgaa cagcagttcg
      721 tcatgcacct gcaacaacat ccgagcggac gggcactcgc gcgccagcac cgggggcaac
      781 tgcaccatgg cgcgtttgat gatgtcggcc gcaccgccct gcaacggcgc gttgatcgcc
      841 tggcgctcgg cgtatgaccg gcgcgcctgc atcttgtcgt tgatgccgga gatccagcag
      901 cgccggccaa acggtgtggt gacgtagcct ttctctttcg ccaccgacct ggcgtgttcc
      961 atgtaatcgc ggatgcccgg atagcgttcg aagtagcgct tgatgtagcc aagcgcttcg
     1021 ccctggccga tgccaagctg acgggcgagt ccgaacccgc tgatgccata gataatgccg
     1081 aaattgatgg ctttcgcacg gcggcgggtc atcgggtcca tgccctccat cgggatccca
     1141 aacacttcgc tggcggtgcg ggcgtggata tcctcgccgc gggcgaaact ttctttcagg
     1201 gccggaatgt cggcgacatg ggccagcagc cgcagctcga tctgcgagta gtcggcgctg
     1261 accagcacat tgcccggctc ggcaacgaag gcgtgacgga tgcggctgcc ttcctcggtg
     1321 cggatcggga tgttttgcag gttcggatcg gtcgacgaca gccggccggt ctgcgcgatg
     1381 gccatggcat agctggtgtg cactcggccg gtttcgggat tgatctgttc caccagcgca
     1441 tcggcgtaag tggatttcag cttctgcaac tgccgccatt ccaggatacg cccaggaagt
     1501 tcgtggcctt ggtcggcgag gccctgcaac acggacgaat cggttcccca ggcaccggtc
     1561 ttcatccgtt tgccaccagg caaattcatt ttgtcgaaca gcacctcacc cagttgcttg
     1621 ggcgagccaa cgttgaattc gaagcccgca aggcggtggc agtccttctc catcaccgcc
     1681 atacgttgtt cgaaatcgac cgacatacga cgcaggtcat cggcgtcgac tttgattccc
     1741 gcccgttcca tgtcgagcaa cacgggcacc aaacggcgtt ccacctgctc gtacagtgcg
     1801 agtgcgtgat tggcgcgcag gcgaggcttc aggcaggccc acaggcgcaa ggtcacgtca
     1861 gcgtcctcgg ccgcgtaggc ggttgcgttg tggatcggca cgttggcaaa actgatgcga
     1921 ttgcggccgg tgccggtcac ctgatcgtac gggatcggcg tgtggcccag atgcagccgg
     1981 gacaattcat ccatgccgtg gccgtgtgcg ccggcgtcct gcgcgaagga gatcaacatg
     2041 gtgtcgtcga tcggggtcag cggcgggaaa ccggcgcggg ccaacaccat catgtcgaac
     2101 ttggcatttt gcaggatttt caggatcgca ggatcgccga acagcgggcc aagcaccgcg
     2161 atcgcatccg ccacggcaac ctgttccgcc aaaacatcgt gacgcagcgg cacataacag
     2221 gcgtggccgg ctgcagtcgc caacgacagg ccaacaagcg aggcgcgcat cgcatccagc
     2281 ccatcggtct ccgtatccaa cgcgaaacaa ccggcagcgc gcgcagcgtc agcccacaca
     2341 cgcaaagcct caccagtggt gaccgactcg tagttgccga agtccacatc cgaggcagga
     2401 accggcggcg catcggccgg cttcggagcc tcggccacct gcgccgctcc ccccaaaccc
     2461 agccttgcaa tcgtgctccg gaacccttgc gcggccagcc aggccgccag atgcaccgtg
     2521 tcaggttgct tcaccaccag cgcgtccagc ggcagaggca gcggcgcatc ctcccgcagg
     2581 gtcaccagca cgcgcgaaat tcttgctttc tcggcatgtt cgatcagcgc gtcgcgacgc
     2641 ttggacggct tcatcgatgg cgcggcagcc agcaccgctt ccagattgcc aaactcgccg
     2701 atcaactgcg cagcaccctt ggggccgatc cccggcacgc ccggcacgtt gtcggtcgag
     2761 tcgccaatca gcgactgcac ctcgatcacc ttgtccggcg tgacgccaaa cttttccatc
     2821 acctcggcgg gcccgatcgg cttctgcttc agcggatcca tcatcatcac accgggcctg
     2881 atcaactgca tcaggtcctt gtccgaggaa acgatcgtgg tgcgccagcg ttgatcctcg
     2941 gcggccctgg cataggcggc gatcagatcg tcggcctccc agtcggtcag ttcgatggcg
     3001 gggacaccga aagcctcggt ggcctcgcgg gtcaggatga attgtgggac cagatcctca
     3061 ggcgcgggcg ggcgctgtgc cttgtaagcc tcatacagcc ggttgcggaa cgtgaagcgg
     3121 ccggcatcga agatcaccg
//
LOCUS       DATAVD010001448         2343 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_884544, whole genome shotgun sequence.
ACCESSION   DATAVD010001448 DATAVD010000000
VERSION     DATAVD010001448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2343
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_884544"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..412
                     /locus_tag="VHX39_27745"
     CDS             <1..412
                     /locus_tag="VHX39_27745"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007282621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEX3994987.1"
                     /translation="LGLPNREDVKTGVITYKLAAHAADLAKGHPSARLRDDAVSRARF
                     EFRWEDQFNLSLDPDTARNFHDETLPKEAHKTAHFCSMCGPKFCSMKISHDIREEAAR
                     VAGLEMQKETFALTGGRLYMPVPEHVADTSEATA"
     gene            complement(689..1417)
                     /gene="istB"
                     /locus_tag="VHX39_27750"
     CDS             complement(689..1417)
                     /gene="istB"
                     /locus_tag="VHX39_27750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_043766072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEX3994988.1"
                     /translation="MERTEILTTMSALKLYGMKAAFDEIIATAVKRQHEPQRIVGDLL
                     TAEITEKQARSIRYQITIAKLPLAKDIDEFRFENTPINETLVRDLASGNFLAHQRNVV
                     LVGGTGTGKTHLAIAIARACIRDGARGRFFNVVDLVNKLEAEGRSGRQGRMAEYLCRL
                     NFVVLDELGYLPFAQSGGQLLFHLVSRLYEQTSVLMTTNLAFGEWPSVFGDAKMTTAL
                     LDRLTHHCDIVETGNESWRFKNRA"
     gene            complement(1396..2274)
                     /locus_tag="VHX39_27755"
                     /pseudo
     CDS             complement(1396..2274)
                     /locus_tag="VHX39_27755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012778788.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
BASE COUNT          420 a          720 c          747 g          456 t
ORIGIN      
        1 tttgggcttg cccaaccggg aggatgtaaa aaccggcgtt atcacctaca agctcgcggc
       61 ccatgcggcg gacctggcga aaggtcatcc ttctgcccgg ctacgtgacg acgctgtttc
      121 ccgcgcaaga ttcgagttcc gctgggagga tcagttcaat ctcagcctcg acccggacac
      181 ggcacggaac ttccacgatg agacgcttcc caaggaggcg cataagaccg cgcatttttg
      241 ttccatgtgt gggccaaaat tctgctccat gaaaatcagt cacgatattc gtgaggaggc
      301 ggcgcgtgtg gccgggctgg agatgcaaaa agaaacattc gcgttgacag gtggccggct
      361 ttatatgccg gtcccggagc acgtcgccga tacgtcggaa gccacagcgt gatattgccc
      421 cccatggccg gcgctgattt ggcgcccgcc cgtccgaaag tcgccgttct cgcggttacg
      481 ttccgaggag atgaggttat tctcgtttgt caatcggcat tggattagga cccctgatcg
      541 gcgtgcaaaa gggacccctt tgagcggcat attccggtag ttcgcagggg ccccgcgcgc
      601 cgcggagtgc ccgttcacga ggctgacgca gcggcgcgtg gggggctgtg gccccaccgg
      661 tgcgagggcg cgggtctggg gcggaggatt aggcgcggtt cttgaagcgc cagctttcgt
      721 ttccggtttc gacgatgtcg cagtgatggg tcaggcggtc gaggagagcc gtggtcattt
      781 tggcgtcgcc aaagacgctg ggccattcac cgaatgccag gttggtcgtc atcagcaccg
      841 acgtttgttc gtagagacgg ctgaccaggt ggaacagcag ttgccctccg gattgcgcga
      901 atggcaggta gccgagttcg tcgagcacaa caaagtttag ccggcaaaga tactcggcca
      961 tgcggccctg ccggcctgag cgcccctcag cttcaagttt gttgaccaga tcaacgacat
     1021 tgaagaaccg gccgcgggcg ccgtcgcgga tgcaggcacg ggcaatcgcg atggccagat
     1081 gggtcttgcc ggtgccggtg ccgccgacca gcacgacgtt gcgctggtgc gccaggaagt
     1141 tgccgctggc gaggtcacgc accagcgtct cgttgatcgg cgtgttctcg aagcggaact
     1201 cgtcgatatc cttggctagc ggcagtttgg cgatggtgat ctgatagcgg atcgatcttg
     1261 cctgcttttc ggtgatctcc gcggtcagca gatcgcccac gatccgctgc ggctcgtgct
     1321 ggcgctttac cgcggtggcg atgatctcgt cgaacgcggc tttcatgccg tagagtttca
     1381 acgcggacat ggtggtcaga atctcggtac gttccattct tggatgctcc tgaggttgtc
     1441 gtatctggcg caatcggcgg ttggtatgtg ctgcagccgg agcgcatccg gggtcatgat
     1501 cgtcaggggc ggcgcgggct cccggcggcg ggccaggatg ttgaggacga catcagccga
     1561 gtgcacgcct tcacgcagcg cttccagaca ggccgcttcc accgccggca gaccatcgct
     1621 cagcactgcg gccaggatgg cgaccatctg ccggtcgcca tcagcagggc cgatgagctt
     1681 gcggcggatc cgctccagcc ctgccggcag cacccagttc ttgaatggcg cgccgttgcg
     1741 cagcgccccc ggcttgcggg caagcaccgg cacgtagtgc caagggttga acactgtctg
     1801 atcccgcccg aagcaacgcg gatgctcgcc gacaatacgc ccagcctgac gcaattcgat
     1861 ccgctcggca taggcacgga cttccaccgg ccgcccgacg gcgccggccg cgacggaata
     1921 tctgttattg tcgaaccgca cgaggcaggt cttcgacact gaggccgtta ccgcatggaa
     1981 cccgtcaaac cgcccggcat aggccaccag gctcggccgc tcggcctcga acatctgcca
     2041 gatggtccgc tcccgcagtt cggggtggtg gtgcgcgcgg gcatacgcga cgcagtgatc
     2101 gagcagccag gcattcagct cgtcataact cttcacccgc agccgcggcg tgaagaaccg
     2161 ttcgcgcacc agtccgacct ggttctcgac ctgccccttc tcccagcccg aggctggtgt
     2221 acaggcaacc ggatcgacca gataatggct gcacatctgc aggaaccggc gattatccga
     2281 ggcgcgctat gtatatcatt gcgccacctc atcttcatgc cggttcgcat ccagatatcc
     2341 ggc
//
LOCUS       DATAVD010001449         2976 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_508814, whole genome shotgun sequence.
ACCESSION   DATAVD010001449 DATAVD010000000
VERSION     DATAVD010001449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2976)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2976)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2976
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_508814"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="VHX39_27760"
     CDS             complement(<1..192)
                     /locus_tag="VHX39_27760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3994989.1"
                     /translation="MPGGAYSLRTRTFLGVLAGAAFRCPAGTAEDTKRNSRCIMDTQL
                     GIAVVTNSSHGMASFRTAVE"
     gene            861..1988
                     /locus_tag="VHX39_27765"
     CDS             861..1988
                     /locus_tag="VHX39_27765"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3994990.1"
                     /translation="MDRIDAMKVFVTALDEGSLAGAGRKLGRSPAAVSRAIAFLEACV
                     GAELLHRTTRSIKTSGPGEQYAVTCRRVLTDLEEAEMVAAGERSAPRGTLTLTAPEIP
                     GDAVLRPILDAYMDAFPAVSARLYLTDRPVKLVDEGIDIALRIGHLPDSTSVAIRVGE
                     VRRVVVAAPGYLARRPRIEQPGDLANHKIIAMSQFGLDCWSFPPLPGSCVPRTVHFTP
                     RLVVNSVRGAVASTVEGCGITRVFSCQVAEHVCAGELEILLADDEDPAIPVHVLAPTG
                     RLAVPKARAFVDFAVPRLRSYFAGLAMDAGEMAGRSRRGSTESQVVVPLRASGKQIDV
                     RQHARMESDDVPAAATQGAAFRRIHPITPGSQNQRELMTVA"
     gene            2061..2756
                     /locus_tag="VHX39_27770"
     CDS             2061..2756
                     /locus_tag="VHX39_27770"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3994991.1"
                     /translation="MFTGKVIIVTGSAGNVGSALATLLASRGARIAAVDTARDRLHTV
                     TASLAGTGHLALSDFDLTDPAATTALVAEVRRSCGRLDGVGTTVGGFAMAPHAEAGLD
                     HWDAMFSVNVKTTWNIYRAAIPAIREAGGGALVAIGAAAGLKGAAQMAAYGAMKGAVM
                     RLTESLADELRPDRIRVNAVLPSTIDTPQNRAAMPGADTSRWVTPSEVAEAIAFLLSD
                     RASGVTGALLPVG"
     gene            2854..2930
                     /locus_tag="VHX39_27775"
     tRNA            2854..2930
                     /locus_tag="VHX39_27775"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2888..2890,aa:Arg,seq:acg)
BASE COUNT          542 a          915 c          988 g          531 t
ORIGIN      
        1 ttctaccgcc gtccgaaacg acgccatgcc gtgggatgag ttggtcacca cggcgatccc
       61 caattgcgta tccatgatac acctcgaatt gcgtttcgtg tcttcggcag taccggccgg
      121 acagcgaaat gctgccccgg caaggacacc taagaacgtg cgagtgcgaa gcgaataggc
      181 gccgcccggc acacactctt tcacgttgcg aatgagtagg ggactgatgc cggcttatat
      241 ccaatgccag acgcgggaat cggcgttcgg catcatcgat gagggcacgg attttccgct
      301 gaggtgggct gcctgagagg aaaacgccgg gcggtcagcc acccattatt cgggcaaccg
      361 atcacccgtc gtgcaattcc gcaaaacacg tgctgctgcg aaagatgata aagtcgacgt
      421 ctggtatcgt tgtcggcaat ttttcgtttg tttgccagta atgatagagg cgcatttgcg
      481 cctggcacag aggtcttgct tcctgtcggc acggcgtcgc tgctgccggt ggtggcgtac
      541 cgggtattcc atgggcaagt gcgagcaaac gttgctcatc attcatcgca ccgggcgcct
      601 cgcgatggag acaatcggta gaattgaaaa atcacggtgc ggactcaaaa tacacccgga
      661 accgtcatcg ccagagtgtg tctcaccgcg tcacctgagc ggcgccgtaa gggaaactgg
      721 tcatgaaccc gatcgccaac catctggccg tgcgtgcgac accgcggcgg caggagcccg
      781 ggatcggaga atcgccacta ccttgctgca cgtccaagcc tgggccgcat cggccaggcc
      841 gttcttgctg aggagagatc gtggaccgca tcgatgcaat gaaagtcttc gtcaccgcgc
      901 tggacgaagg cagtctggcg ggcgccggcc gtaaactcgg ccgatcgccc gccgcggtca
      961 gccgcgctat cgccttcctg gaggcatgcg tcggtgccga actgctgcac cggacaaccc
     1021 ggtcgatcaa aaccagtggc ccaggggagc agtatgcggt cacctgccgc cgggtcctga
     1081 ccgatctgga agaggcggaa atggtggccg caggcgaacg gtcagcgccg cggggcacac
     1141 tcacgctgac tgcgccggag attccgggag acgctgtgct acggccaatc ctcgacgcgt
     1201 acatggatgc gttcccggcc gtgtcggcgc ggctttatct gaccgatcga ccagtgaaac
     1261 tggttgatga gggcatcgac attgcacttc gcattggcca cctccccgac tcgacctcgg
     1321 ttgcgatccg ggtcggcgaa gtgcgccggg tggtggtggc cgctcccgga tacctggcac
     1381 ggcgcccgcg catcgagcag ccgggcgacc tggcgaacca caagattatc gcaatgagcc
     1441 agttcggcct cgactgctgg agcttcccgc ctttgcccgg ctcttgcgtg ccacgcaccg
     1501 tccacttcac gccccggttg gtggtcaaca gtgtccgggg cgcggtcgcc tcgaccgtcg
     1561 aagggtgtgg cataacacgt gtgttctcgt gccaggtcgc cgagcacgtg tgcgcaggag
     1621 aactggaaat actcctcgcc gacgatgagg atcctgcaat tcccgtgcac gtgctggcgc
     1681 cgaccggtcg cctggcagtg cccaaagcgc gcgccttcgt ggacttcgca gtgcccaggt
     1741 tacggagtta ttttgccgga ttggcgatgg acgcaggaga aatggcgggg cggtcgcgac
     1801 gtgggtccac cgaatcgcag gtggtcgttc ctcttcgggc gtccggcaag caaatcgacg
     1861 tccggcagca cgcgagaatg gaatctgacg atgtcccagc tgccgcaacg caaggtgccg
     1921 ccttccggcg catccaccca atcactcccg ggtcacagaa ccagcgggaa ctgatgacgg
     1981 ttgcgtaaac atcaccgggc gaaccttctc gccgggccga accgcgtgaa tggtgacccg
     2041 gtgcaaatgg aggaggcggc atgttcaccg gcaaagtcat catcgtcacg ggaagcgccg
     2101 gcaatgttgg atccgccctg gccacgctgc tggcatcgcg cggcgcccgc atcgctgccg
     2161 tggatacggc gcgggatcgg ctacataccg tgacagcgag cctggcgggc acgggtcatc
     2221 tcgcattgtc ggatttcgac ctgaccgatc ccgcggcgac gaccgcgctg gtcgccgaag
     2281 tgaggcgcag ctgtggacgg ctcgatggag tgggcacaac ggttggcggc ttcgccatgg
     2341 ccccgcacgc cgaagcaggc ctggaccact gggatgcgat gttcagcgtg aacgtgaaga
     2401 ccacgtggaa tatctatcgc gcggcgatac cggcgatccg cgaggctgga ggtggggcat
     2461 tggtcgcgat cggtgccgcc gctggcctga agggtgccgc gcaaatggcc gcgtacggcg
     2521 cgatgaaagg tgcggtcatg cggctgacgg aaagcctggc cgatgagctt cgccccgatc
     2581 gtatccgggt caacgccgtt ctgccgtcca cgatcgatac tccgcagaac cgcgcggcga
     2641 tgccaggtgc ggacacatcg cgttgggtta ccccgtcgga ggtcgcagaa gccatcgcct
     2701 tcctgttgtc cgaccgggcg agcggcgtca ccggcgcatt gttgccggtc ggctgacgcg
     2761 agacgaagcg gcgccccggg tgaggcacac cagcggtccg agttcgggct tgtctcaacc
     2821 gggcggggcg ggctacaccc ggcttcctgg cgggtgcccg tagctcaatt ggatagagca
     2881 ccagactacg gatctggggg ttgggagttc gagtctctcc gggcgcgcca gttctgccgg
     2941 tggctcccaa cgcgagacgg ctgtcggggt cgcggg
//
LOCUS       DATAVD010001450         1690 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_697275, whole genome shotgun sequence.
ACCESSION   DATAVD010001450 DATAVD010000000
VERSION     DATAVD010001450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_697275"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..762
                     /locus_tag="VHX39_27780"
     CDS             <1..762
                     /locus_tag="VHX39_27780"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX3994992.1"
                     /translation="GGIVGRENRISQNGQLFQQFANIGSYASHMLLHENSLVRIDPDL
                     PLDRAALVGCGVLTGVGAALRSSGLQAGQTVAVFGCGGVGLSIVQGARIGGARQIIAV
                     DQFDSKLEMAKAVGATHTVNSTQDDAVKAVRALSKGLGVDHAFEAVGLSVLCRMAIES
                     LAVRGTATIVGVLPPDAKIEFPWLAIRPECKVQTSRMGSNQFRTDIPNYLEFYRQGRL
                     DLDSMISRRGVLGDINDAFRAMKAGEVARSVLMFD"
     gene            920..>1690
                     /locus_tag="VHX39_27785"
     CDS             920..>1690
                     /locus_tag="VHX39_27785"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019644624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX3994993.1"
                     /translation="MTNPRSLLRHDHNGIATLTLNRPQSRNALSMGLMQALDVELVAI
                     AEDPSVHVVIIAANGPVFCAGHDMREMRATPTREAYEAVFALCSRLMQRIVTLPKPVI
                     ARVHGAASAAGCQLVATCDLAIAGASARFATPGVNIGLFCSTPMVALSRAVGRKAAME
                     MLLTGDLIDADRAREIGLVNRVVPDAELDNAVTALARQIAGKSPLTLAIGKAAFYRQA
                     ELDLAAAYALTAEVMTNNMLAHDAEEGIDAFLEKRPPVW"
BASE COUNT          308 a          565 c          504 g          313 t
ORIGIN      
        1 ggaggcattg tcgggcggga gaaccgcatc tcgcaaaacg gccagttgtt ccagcagttc
       61 gcgaatatcg gcagttatgc ctcccacatg ttgttgcacg aaaattcgct ggtacggatc
      121 gatcccgatc tgccgctcga ccgagccgcg ctggttggtt gcggcgtcct gaccggggtc
      181 ggagcggcac tccgcagcag cggattgcag gccggtcaga ccgttgcggt attcggctgc
      241 ggcggcgtcg gcctgtccat cgtgcaaggc gcgcggattg gcggcgctcg gcagatcatc
      301 gcggtggatc agttcgactc caaactggaa atggcgaaag cggtcggcgc cacccacacc
      361 gtcaactcca cccaggacga cgcagtgaaa gccgtgcgtg cactgagcaa aggcctcggc
      421 gtcgatcacg cgttcgaggc cgtcggcctg tcggtgctgt gccgcatggc gatcgaaagc
      481 cttgccgtcc gaggcaccgc aacgatcgtc ggcgtactgc cgcccgacgc aaagatcgaa
      541 ttcccatggc tggcgatccg gcccgagtgc aaggtgcaga cctcacgcat gggatcgaac
      601 cagttccgca ccgacattcc gaattacctg gagttctatc gccaggggcg tctcgacctc
      661 gattccatga tttcccgccg cggcgtgttg ggcgacatca acgatgcgtt ccgggcaatg
      721 aaggccggcg aagttgcgcg atcagtgctg atgttcgatt gaacgccgtg agtgtggcga
      781 ccgcctctta ctgtcgacgg gtctgccata tcttccgcgc attttcttca gggatgatat
      841 atcgccaaac cgatgacaat gcgaccagga tgcgatctcc aaccggtcat cggcctcgca
      901 tcgctcggac tttgaattta tgaccaaccc tcgttctctg ctccgccacg accacaacgg
      961 catcgccacc ctgaccctca atcggccgca gtcgcgcaac gctctgtcca tgggtttgat
     1021 gcaggcactc gacgtcgaac tcgtggcgat cgccgaagat ccgtccgttc acgtcgtcat
     1081 catcgccgcg aacggcccag tgttctgcgc cggccacgac atgcgggaga tgcgcgcgac
     1141 gccgacccgc gaagcatatg aagccgtgtt cgcgctgtgc agccgcctga tgcaacggat
     1201 cgtcaccctg ccgaaaccgg tcattgcccg tgtgcatggc gcagcttccg ccgccggctg
     1261 tcagttggtc gccacctgcg acctcgcgat cgccggcgcg tcggcacgct ttgccacccc
     1321 cggcgtcaat atcggcctgt tctgctcgac cccaatggtt gccctgagcc gtgccgtcgg
     1381 ccgcaaggca gccatggaaa tgctgctgac cggcgacctg atcgacgccg atcgcgcccg
     1441 cgaaatcggc ctcgtcaacc gcgtcgttcc ggacgccgaa ctcgacaatg cggtcaccgc
     1501 gctcgcccgc cagatcgccg gcaaaagtcc actcactctg gccatcggca aggcggcatt
     1561 ctatcgccag gccgaactcg atctggccgc cgcctacgcc ctgaccgccg aggtcatgac
     1621 aaacaacatg ctggcccatg acgccgaaga ggggatcgat gcgttcctgg aaaaacgtcc
     1681 tccggtctgg
//
LOCUS       DATAVD010001451         5398 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2185426, whole genome shotgun sequence.
ACCESSION   DATAVD010001451 DATAVD010000000
VERSION     DATAVD010001451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5398
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2185426"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            405..1913
                     /locus_tag="VHX39_27790"
     CDS             405..1913
                     /locus_tag="VHX39_27790"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEX3994994.1"
                     /translation="MSVTAARPYGGFDRLPIAGTWREGRSGNIMPDQDPYNGSVLVQI
                     PQGNKEDLNAAFEGAAKAQAGWAAELPSARTNVIRRAAAVFEARREEIVSWLIQEAGS
                     TRLKANLEWASSHAILIWGASAPDLVEGKNLPTDIRGKEGRVHRKPVGVVGVISPWNW
                     PLHLSSRSIVPALAVGNAVVVKPASDTPVTGGLLLAKIFEEAGLPPGVLSVIVGAGKD
                     IGDAFVTHPVPRVISFTGSTPVGRRIAELAAKAAILKKVDLELGGNGPFVVLDDADIN
                     HAVEAATFGKFLHQGQICIAINRIIVDQSVHDAFLDRFVERVRSLKVGDPSEPDTMIG
                     PIINQSQLDHLVARIRKAPEAGARLLVGDNPQGLVLPPHVFADVTNDMELAREEIFGP
                     VAPVIRAADSDDALRIANDTGYGLAGAVFTSDLDRGAQFAQQMQVGMAHVNDQSVVDL
                     PNSPFGGEKNSGIGRFNGTWVIEAFTTDQWVTVQHTPRRYPWNAHDVQGPWS"
     gene            1960..3636
                     /locus_tag="VHX39_27795"
     CDS             1960..3636
                     /locus_tag="VHX39_27795"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3994995.1"
                     /translation="MIDNRDERMFPKLTPEEIDRIRRFGELRHYAPGEALFVTGDIAP
                     GLFVIVRGKVNVVRHDALGHLSPIVDMEAGEIIAEIGQLSGRPALVDVHGTENIEALL
                     ISPGRLRRLMLAEPELGDMIMKALILRRTVLIESGAGGPVLIGPETAPDMLRLQNFLA
                     RNSHPYQVLDPSADRDAADLVAHYTSSPADLPLAACPKGTVLKNPREGNLARALGMLR
                     TEAPDRTYDLAIVGAGPAGLAAAVYGASEGLSVVVLDARAFGGQAGASARIENYFGFP
                     LGISGHDLTGRGFVQAQKFGAEVEIPTEAVTLDCAATPFGIALSDGRIVRAANVVVAS
                     GARYRRPDVPHLADFEGKGVWYWASPIEARLCRQSEVALIGGGNSAGQAAVFLRHFAS
                     KIWMLVRGPSLAEHMSRYLVDRIHATENIEVLTQTELVALSGSREGQLERVRWRHNSS
                     GEETEKPTRNVFVFTGADPATGWLEGCGVERDDKGFVRTGAPGAAGITGAGKRAGRPL
                     PLETSVAGVFAVGDVRSGSVKRVGAAVGEGAAVIQQIHTARERPPEALGH"
     gene            complement(3817..4785)
                     /locus_tag="VHX39_27800"
     CDS             complement(3817..4785)
                     /locus_tag="VHX39_27800"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HEX3994996.1"
                     /translation="MNTIPETMRAAAIDRFGGPEILTTHVLPVPELSDEEVLIALHTA
                     GVGPWDADIRAGWVPEDAVPQFPLVLGTDGSGRIAAVGSSVRGFQEGDEVYSYSWANP
                     KGGFYAEYVAVPAERAAHVPPGLALREAGAIPVTGLTAMQGIDGVLHVRRHESVLIHG
                     GSGGVGTLAVQFAKLRAARVLVSASGPDGVALVRRLGADEAVDGRHEDVAAAARSFAP
                     DGLDAILALAGGEALEACIAALHKGGRVAWPNGIEPEPKPRPGIKMASYDAVSDISEF
                     TKLRQAIGAMKLQVPIDSEYPLDQASDAHSRLARGHVLGKVVLRIR"
     gene            complement(4798..>5398)
                     /locus_tag="VHX39_27805"
     CDS             complement(4798..>5398)
                     /locus_tag="VHX39_27805"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3994997.1"
                     /translation="DASSAEGCNALIAAESVIDILVNNVDMFKVQPFFDIEDADWLRM
                     FETNVLSGIRLSRHYAPRMRERGWGRVIFISSESALNIPKDMVHYGMTKTAQLAVSRG
                     LAEEMASSAITVNAVLPGQTRSEGVETFLDQMAQQQGKTRAEIEAEFFRTTRPTSLIQ
                     RFAEPQEVANLVVYLASPAASATTGAALRVDGGVISYIV"
BASE COUNT         1014 a         1711 c         1687 g          986 t
ORIGIN      
        1 cactcgcctg ggctgagcaa gagatggcat tcggcctcgt ttaaccggca ccaaccacca
       61 acaggagacg cgctacgctt tcaagggaag gcaggcgctt accgccggcg tcgtcgcgtc
      121 gcttacgctg cgaaattacg aatatgtgaa taagctccag gatcgggacc tatttcggcg
      181 gcgggtccgg gaatgaagcg ccgcaaactc aaggtccttt ccatgggacc ccaccgccga
      241 aaggggttct ggtggcgagc cgatccacat gcctggatgc gggggcagcg aatctgaccg
      301 gcatcaacgt cgggggcgca ctcgcctgct aggtaaaccg tacaaacggt tctccgaagc
      361 gggaggcagc cttggccaca cacgccctag acaacacaac ctccatgtct gttacggcag
      421 cacggcctta cgggggcttc gaccgtctgc ccatcgctgg aacgtggcgc gaaggccggt
      481 cgggcaacat aatgcccgac caagatccat ataacgggtc agtgctggtc cagatcccac
      541 aaggcaacaa ggaggatttg aacgcggctt ttgaaggcgc tgcgaaggcc caggcaggct
      601 gggccgcaga acttccgagc gcgcgcacca acgtaatccg tcgagcagcg gcggtctttg
      661 aggctcgacg cgaggaaata gtttcctggc tgatccagga ggcgggcagt acccgcctca
      721 aggccaatct tgaatgggct tcctcccatg cgatcctgat ctggggtgcg tccgcgcccg
      781 acctcgtgga aggaaaaaac ctgcccaccg atatccgcgg taaagaggga cgggtgcacc
      841 gcaagccagt tggcgtcgtc ggcgtgatca gcccgtggaa ctggccgttg catctctcca
      901 gccgctccat cgtgccggcg ctggccgtcg gcaacgccgt tgtcgtgaag ccggccagcg
      961 acacgccagt tacaggtggc ctgttgctgg cgaagatctt cgaagaggct gggcttcctc
     1021 ccggcgttct cagcgtcatt gtcggggccg gcaaggatat tggcgacgcg ttcgtgaccc
     1081 atccggtgcc acgtgtaatt tcctttacgg gctcgacgcc cgtcgggcgc cggattgcgg
     1141 aactcgctgc caaggcggcg atcctgaaga aggtcgacct tgaactcggg ggcaacggac
     1201 cattcgtcgt actcgacgac gctgacatca atcacgccgt agaggccgcc acattcggca
     1261 aattcttgca ccagggccag atctgcatcg cgatcaaccg gatcatcgtc gatcaatccg
     1321 tccacgacgc cttcctcgac agattcgtag agcgggtcag gtcactcaaa gttggcgacc
     1381 ccagtgagcc cgatacgatg atcgggccga tcatcaatca atcccagctc gatcacctcg
     1441 tcgcacgcat ccgcaaagcg cccgaggccg gcgcacgcct gctcgttgga gacaacccgc
     1501 aggggttggt tttgccaccg catgtcttcg ccgacgtcac gaatgatatg gaacttgcac
     1561 gcgaagaaat cttcggtccg gtggccccgg ttatccgcgc agcagattcg gacgacgcgt
     1621 tgcgtattgc caacgacacc gggtatgggc tcgccggcgc ggtattcacc agcgatctcg
     1681 atcgcggggc gcaattcgcc cagcagatgc aggtcggaat ggcgcatgtg aacgaccaat
     1741 ccgttgtcga tttgcccaac tcgccgttcg gcggcgagaa aaactcgggc attggccggt
     1801 tcaatggcac ctgggtgatc gaagcgttca caacggacca gtgggtcacc gtgcagcaca
     1861 cgccgcgccg ctatccctgg aacgcacacg atgtgcaggg gccttggtca tagtcccagc
     1921 tatcccgttt ggccaaaaac aaggagatcg agtttggccg tgatcgacaa ccgggacgag
     1981 cggatgttcc caaaactcac gcccgaagaa atcgaccgaa tccgccggtt tggcgagctt
     2041 cggcattacg ctccgggcga ggcgctcttt gtaactggcg acatagcacc gggtctgttc
     2101 gtcattgtcc gtgggaaggt gaatgtcgtg cgccacgatg cactcggcca tctttctccc
     2161 atcgtcgata tggaagctgg cgagatcatc gcggaaatcg gacagctctc cggcagacca
     2221 gcgcttgttg acgttcatgg aaccgaaaat atcgaggcgc tgcttatctc gcccggcaga
     2281 ctgcgccgac tcatgctcgc tgagccagaa ctcggcgaca tgatcatgaa ggcgctgatc
     2341 ttgcgccgga cggtgttgat cgaatccggg gccggcggtc ccgttctgat cggtccggaa
     2401 acggctcccg atatgttgcg tctgcagaat ttcttggctc gcaattctca tccatatcag
     2461 gtgctcgacc cctcggccga tcgcgatgcg gcagacctcg tggcgcacta cacttccagt
     2521 ccggccgacc ttccgctggc cgcatgcccc aagggcacgg tcctgaagaa cccacgcgaa
     2581 ggcaacttgg cgcgtgcgct gggtatgttg cgcaccgaag cgcccgatcg aacctacgac
     2641 cttgccatcg tgggagcggg gccggccggc ctcgcggccg cagtctatgg cgcatccgag
     2701 ggcctgtcgg tggtcgtcct tgatgcgcgg gctttcggtg gtcaggccgg agcgagcgcc
     2761 cgcatcgaga actatttcgg gttcccactc ggcatctcgg gccatgacct cactggacgt
     2821 ggcttcgtgc aggctcagaa attcggggct gaggtggaga tcccgacgga ggctgtgacg
     2881 ctcgactgcg ccgcgacccc gttcgggatc gcactttcag acggtcgcat tgttcgcgcg
     2941 gcaaacgtgg tggtggcgtc gggcgcccgt tatcggcgcc ccgatgtgcc gcatctggcg
     3001 gatttcgaag ggaagggcgt ttggtattgg gcctcgccga ttgaggcgcg cctgtgccgt
     3061 cagagtgagg tcgctctgat cggcggcggc aactcggcag gtcaagccgc ggtattcctg
     3121 cgccacttcg cttcaaagat ctggatgctg gtgcgcggac ccagcctcgc tgaacacatg
     3181 tcccggtatc tcgtcgatcg gatccacgcc accgaaaaca tcgaagtgct cacccaaacc
     3241 gaactcgtgg cactgtcggg atcacgggaa ggacaactcg aacgcgtgcg ctggcggcat
     3301 aattcgagcg gggaagagac cgagaaaccg acccggaacg tatttgtgtt caccggtgcg
     3361 gatcctgcga cgggctggct ggagggctgt ggcgtcgagc gggacgacaa aggattcgtt
     3421 cggacgggcg cacccggcgc cgcgggcatc accggagcag gcaagcgggc tggtcgtccg
     3481 ttgccgctgg agaccagcgt agccggggta ttcgccgttg gcgatgtccg ctcgggctcg
     3541 gtcaaacgcg ttggagccgc cgttggggag ggggccgcag tcattcagca aatacatacg
     3601 gcgcgggaga ggccgccgga agcgctgggc cattagactt gataggccga tcgaagaccg
     3661 aactcggcga gaccaaccgc tatctcgaca gtcggattga gcaggatcat cgtggcacga
     3721 aggggcgata ccagcccatc cgcgggttca agagcagcgc gtccgctgcc cggttttgtc
     3781 gaagccgatg aactccgaac ttcctcaagc tgcctgtcag cgaatgcgga gtacgacctt
     3841 ccccagcaca tggccacgcg ccagccgaga atgtgcgtcg gacgcctggt ccaatgggta
     3901 ctcggaatcg atcggtacct ggagtttcat cgccccgatc gcctggcgca gcttagtgaa
     3961 ttcgctgata tcgctgacag catcataaga cgccatcttg ataccggggc gcggcttcgg
     4021 ttccggctcg atgccattcg gccaagcgac acgaccgccc ttatggagcg cggcgataca
     4081 ggcttcgagc gcctcgccac cagcgagcgc caagatcgca tccagcccat ccggcgcgaa
     4141 gctgcgcgcc gcggccgcaa catcctcatg ccggccgtcc accgcttcgt cggcgcccag
     4201 ccggcgtacc agcgcgacac catccggacc tgacgcagag accaggacac gggcggcgcg
     4261 cagcttggcg aactgcaccg ccagcgttcc cacgccgccg gagccgccgt ggatcagcac
     4321 cgactcatgg cgtcgcacgt gcaggacgcc gtcgatgcct tgcatagccg taaggcccgt
     4381 caccggaatt gcgccggcct cccgcagggc aaggcccggc ggcacatgcg cggcgcgctc
     4441 ggccgggacc gcgacgtatt ccgcgtagaa cccgcccttc gggttggccc agctatacga
     4501 atagacctcg tcgccttcct ggaagccgcg cacgctcgat ccgacggccg ctatccgccc
     4561 agagccgtcc gttcccagca cgagcgggaa ttgcggcacg gcatcctctg ggacccaccc
     4621 tgccctgata tcagcgtccc acggcccgac gcccgcggta tgcaaggcga tcagcacctc
     4681 ctcgtcactc agttcaggca ccggcagtac atgggttgtc agtatctccg ggccaccgaa
     4741 ccggtcgatc gccgcggcgc gcatcgtttc tgggatggtg ttcatgcgtt gtgcctttca
     4801 gacgatgtag ctgatgacgc caccgtccac ccgaagtgcc gcgcccgtcg ttgccgaggc
     4861 cgccggcgag gcgagataga cgacaagatt cgccacctct tgcggttcgg caaagcgttg
     4921 gattagcgag gtgggccgcg tggtgcggaa gaactccgcc tcgatctcgg cgcgcgtctt
     4981 gccctgctgc tgtgccatct gatcgaggaa ggtctcgaca ccctcgctgc gggtctggcc
     5041 cggcagcaca gcattcaccg ttatggcgct gctcgccatt tcctccgcca gtccgcgtga
     5101 taccgccagt tgcgcggtct tggtcatccc gtaatggacc atgtccttgg ggatgttcag
     5161 ggctgattcg ctggagatga agatcaccct cccccagcca cgctcccgca tccgtggcgc
     5221 gtagtggcgc gacaggcgga tgccgctgag tacgttggtt tcaaacatcc tcaaccaatc
     5281 ggcgtcttca atgtcgaaga acggctggac cttgaacatg tcgacattgt tgacgaggat
     5341 gtcgatcacg gactcagctg caatcagtgc gttgcagcct tcggcgctgc tggcatcg
//
LOCUS       DATAVD010001452         5383 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3299041, whole genome shotgun sequence.
ACCESSION   DATAVD010001452 DATAVD010000000
VERSION     DATAVD010001452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5383)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5383)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5383
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3299041"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(233..1165)
                     /locus_tag="VHX39_27810"
     CDS             complement(233..1165)
                     /locus_tag="VHX39_27810"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX3994998.1"
                     /translation="MSVTARNDPSFAAAAKVAAASAARRKSPPRYRLRRNIVEALAIA
                     FGLVIAIWSLLPIYNMWMIALDSHDDVFSGTIWPEHPSLDAFRVVVTEDFWYLAKFWH
                     QFANSFYVGFGVMFLTIGIGSLASFTIGRMRIKYSWMLSNAALMTYVIPASFLAIPMY
                     RIMQIYGLSNNLWSVILALTTFATPYAIFIFSQYGKSIPMELDESARIDGANPFQIYL
                     RIYLPLMAPALVAIGTYALLLAWNEYLYNFLLLSTPDSMTVAVALAQFLNSDESPWNF
                     MMATAIIYALPPIILYYGFRRHMAAGLTMGGVKG"
     gene            complement(1162..1929)
                     /locus_tag="VHX39_27815"
     CDS             complement(1162..1929)
                     /locus_tag="VHX39_27815"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX3994999.1"
                     /translation="MVYPIGFGLWLGSDPHLYSQLFADPRYFTAVINTVIYVVVGVNL
                     KLALAFLLSGFFMRKGWWVKALLVVFILPWATPALPAFISIHWLLNGQWGMLNNLLYL
                     LFGIDGPVYLNSHWMGLASNIGAYIWKSLPFWTIILLSGRMSIPQELYEAASVDGATG
                     FRRFLHVTYPLMASLYLVCVLLDTVFALGDFNATNFVSGGGPAMSTEVLATLGIRYAY
                     TVALPRLGVAEVMTALPVLIPLVYILMRKLRVSEGQL"
     gene            complement(2096..3478)
                     /locus_tag="VHX39_27820"
     CDS             complement(2096..3478)
                     /locus_tag="VHX39_27820"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3995000.1"
                     /translation="MTMVNMGRRNVIKGSVGLAAAGALARPYIANAAAKTAVCWLNQG
                     FLPQEDEAMRKVADDYIKESGNKLDYSIMPFMALNQKTISALTSGDVPDLVFMDAPSS
                     ILPQNAWDDKLVDVSDVVEPYESQLSETAKLCSTFYNKATKKRSYYLCPIKQGATPFH
                     IWGDLVEKAGMKMSDVPAKWDDTWNFFKQTQKPLRAKGMRKVYALGMQVTTVGPNDGN
                     NVFTHFLIANGGEGIVTPDGKLHTDDPKVREAAIKSVEFMTNAYKEGFIPPEALSWND
                     ADDNNGYHEKLFVFDFDGTLSTELAMIKNEKAFYHEMVTMAPQQKNDGTPMATQVNAG
                     GGYIPKGAKNVEVAKDFMKYYMKPEVMNENLKGGLGRWVPAIPSLVKSDPFWLQSKMP
                     CLKPYVTEAVLNPTLPVFEGYTPAWGQANAEQLWGQAHADVIKNGMKPADAIDKAFKR
                     ANQIFATMIM"
     gene            complement(3943..4842)
                     /locus_tag="VHX39_27825"
     CDS             complement(3943..4842)
                     /locus_tag="VHX39_27825"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX3995001.1"
                     /translation="MSATTAGHMPAGRRRSTRRRPWRRPIALAVESVICVLILIWTVT
                     PLYSMVEVALEQKDNIFSGDLWPANPTLAGFWTVLTQNYWYVAHFWHEMGNSLIIGAA
                     TCALTLAIGTLTSFVLGRLRLRFSWLVSNAALLTYVIPMSFLAIPFYRVMQNYGLSDS
                     LWAVILVEVTFATPYAIFIFQQYGTSIPIELDEAARIDGASPWAIYWRIYLPLMKPAM
                     VAVGTYALLLAWNEYLYMFLLLSSTSHMTVPVALGQFLNSDEAPWNLMMATAVIYAVP
                     PVVIYYTFRKHMTAGLTMGGVKG"
     gene            complement(4839..>5383)
                     /locus_tag="VHX39_27830"
     CDS             complement(4839..>5383)
                     /locus_tag="VHX39_27830"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX3995002.1"
                     /translation="VPAIPTFIAFHWMLNGEWGFINNALYAVTGLDGPSWLNYRWLAL
                     GSSLVAYIWKWMPFWTVILLAGRMAIPQELYESAAVDGAVGLKRFTCVTFPLLANLYL
                     ICTLLSTIWTLGDFNTIYFVTGGGPSLSTHVLATLGFRDAFEVDNPQLGMAAVMSALP
                     LLIPLVIVLMRKLAKTEVQL"
BASE COUNT         1135 a         1747 c         1532 g          969 t
ORIGIN      
        1 gttcaccacc gtgacccggt accgcggatc ggagaacagc agccggtaaa gccccggatc
       61 gcgccccatc cacagcccat acgcgatggg atagacgacg aacgccgcga aaaccgccac
      121 atacgggatg acgaacgcca cggcccaggc ggtatccgac ccctgaggcc cgccggccca
      181 acgcggccag gaccagccgc ggcgtccggc caccgtcacg cccccgcgga ggtcagccct
      241 tcacgcctcc catggtcagg cccgccgcca tgtgacgccg gaacccgtag tacaggatga
      301 tcggcggcag cgcatagatg atggcggttg ccatcatgaa attccatggc gattcgtcgc
      361 tgttcaggaa ctgtgccagc gccaccgcca cggtcatgct gtccggcgtg gacaacaaca
      421 ggaagttgta cagatactca ttccatgcca gcaacagcgc gtaagtgccg atggcgacca
      481 gggccggcgc catcagcggc aggtaaatcc gcaaatagat ctggaacggg ttggcgccgt
      541 cgatccgcgc cgactcatcc agttccatcg gaatcgactt cccgtactgg gagaaaatga
      601 agatcgcgta cggcgtggcg aacgtcgtca gcgccaggat caccgaccac agattgttgg
      661 acaggccgta gatctgcata atccgataca tcgggatcgc caggaacgac gccggtatga
      721 cataggtcat cagcgccgcg ttactcagca tccaactgta tttgatccgc atccgcccga
      781 tcgtgaagct ggccagcgag ccgatcccga tcgtcaggaa catcactccg aaaccaacat
      841 agaaactgtt ggcgaactga tgccagaact tcgcgagata ccagaaatcc tcggtgacca
      901 cgacccggaa ggcgtctaac gatggatgct ccggccagat ggtcccactg aacacgtcgt
      961 cgtgactgtc gagcgcgatc atccacatgt tgtagatcgg cagcaaagac cagatggcga
     1021 ttaccagacc gaaggcgatc gccagcgcct ccacaatatt gcgccgcagc cgatagcgcg
     1081 gcggcgattt gcgacgggct gccgaggccg cggcaacctt ggccgccgcc gcgaagcttg
     1141 gatcgttccg ggcggtgaca ctcatagctg cccctccgac acgcgaagct tgcgcatcaa
     1201 tatgtagacc aatgggatca gcaccggcag cgcggtcatg acctcggcga cgccgagacg
     1261 cggcagcgcg acggtatagg catagcgaat gcccagcgtg gccagcacct cggtcgacat
     1321 cgccgggccg ccgccggaca cgaagttggt ggcattgaag tcgccgaggg caaagaccgt
     1381 atcgagcagg acgcagacca gataaaggct cgccatcagc gggtaggtca cgtgcaggaa
     1441 gcggcggaac ccggtcgccc cgtccacgct tgcagcttca tacagttcct gcgggatcga
     1501 cattctgccg gacagcagga tgatcgtcca gaacggcagg cttttccaga tatacgcacc
     1561 gatgttggac gccagcccca tccagtgcga gttgagatag accggcccgt cgatgccgaa
     1621 cagcaggtac aacaggttgt tcagcatgcc ccactggccg ttgagcagcc agtggatcga
     1681 gatgaaggca ggcagcgccg gcgtcgccca gggcaggatg aacaccacca gcagcgcctt
     1741 gacccaccag cccttgcgca tgaagaagcc ggacagcagg aaggcgaggg ccagtttcag
     1801 gttcacgcca accaccacat agatcacggt attgatcacg gcggtgaagt agcgcgggtc
     1861 ggcaaacaat tgactgtaga gatgcgggtc gctgccgagc caaagcccga atccgatcgg
     1921 gtagaccacg aaagcgacaa acatcaatac atacggcgcc gcaaaggcgg tggcccagat
     1981 atagtcagca ccgtttatgc caccgatcca cgaccggcga gccgggcgcg ccccggaaaa
     2041 gcgtctgccg gtcgcgaccg cctgctgtga tacgctcatg tttgcctcgc cgggattaca
     2101 taatcatcgt cgcgaagatc tgattggccc gcttgaacgc cttgtcgatc gcgtcggcgg
     2161 gcttcatgcc gttcttgatg acgtcggcgt gcgcctgccc ccaaagttgt tcggcgttcg
     2221 cctgacccca cgccggtgta tagccttcaa aaaccggaag agtcggattc agcaccgctt
     2281 cagtcacata gggcttcagg cacggcatct tggattgcag ccagaacgga tcggatttca
     2341 ccaggctcgg gatcgccgga acccaacggc ccagtccccc tttcagattc tcgttcatga
     2401 cctccggctt catgtagtac ttcatgaagt ccttggcgac ctcgacgttc ttcgcaccct
     2461 tggggatgta gccgccaccg gcattcacct gtgtcgccat cggcgtcccg tcatttttct
     2521 gctgcggggc catggtgacc atctcgtggt agaatgcctt ctcgttcttg atcatcgcca
     2581 gttctgtcga caacgtgccg tcgaaatcga agacgaacag cttctcatgg tagccgttgt
     2641 tgtcgtcggc atcgttccag ctcagcgcct ccggcggtat aaagccctcc ttgtaggcgt
     2701 tggtcatgaa ctcgaccgat ttgatcgccg cttcgcgcac cttcggatcg tcggtgtgca
     2761 gtttgccgtc cggcgtgacg atgccctcac cgccgttggc gataaggaaa tgcgtgaaca
     2821 cgttattgcc gtcgttcggc ccgaccgtgg tgacctgcat acccaaggcg tagaccttcc
     2881 gcattccctt cgcacgcaga ggcttttggg tctgcttgaa gaagttccag gtatcgtccc
     2941 acttggccgg aacatcggac attttcatgc ccgccttctc cacaagatcg ccccagatgt
     3001 gaaacggcgt cgcgccctgc ttgatcgggc acaggtagta gctgcgcttc ttggtcgcct
     3061 tgttatagaa ggtcgagcag agcttggcgg tctccgaaag ctgcgactca tacggctcta
     3121 cgacgtcgct cacgtcgacc agtttgtcgt cccaggcgtt ttgcggcagg atcgacgacg
     3181 gcgcgtccat gaaaaccagg tccggcacat caccgctggt cagcgccgat atcgtcttct
     3241 ggttcagcgc catgaacggc atgatactgt agtcgagctt gttgccgctc tccttgatgt
     3301 agtcgtcagc gaccttccgc atcgcctcgt cttcctgcgg caggaaaccc tggttaagcc
     3361 agcatacggc tgtcttcgct gccgcgttcg cgatatatgg ccgcgccaag gccccggccg
     3421 ccgccaggcc cacggatccc tttataacat ttcgacgccc catgttgacc atggtcattc
     3481 accttccctg ttggccggac gttgagcgcc ggctcgtttg gcatgacttt tttaaccgtc
     3541 tgccctgcga caagcctacg gggcttgact ttcattgtca attttttagc cctccccgat
     3601 cgcactatac tttcggcgag gatgacttcg atcagacgcg cccacgcagc gccgcggccc
     3661 ggcggcgggc acccgccggg tcaaagcgat cggaaagccc aatcattcca caccggcaac
     3721 ctgcgagaaa ccgtcggcga ttcctgaccc tcggtcatga atccagcctg ggaatgccgg
     3781 taagccaaaa gacactcatt cgggacacat aggtcgcggg ttcgttatta tcattattat
     3841 ttgacaggcg cctcggcaaa aggatgaggc agcgcgccgc ccgctgtcaa tccatttgtc
     3901 acgacatacc ccgccacccc ggcgaccggc acggccggac acctacccct tcacgccgcc
     3961 catcgtcagt cccgcggtca tgtgcttgcg gaacgtgtag tagatgacca ccggcggcac
     4021 cgcatagatc accgccgtcg ccatcatcag gttccacggc gcttcgtcgc tgttcagaaa
     4081 ctgtcccagc gccaccggca ccgtcatgtg cgacgtcgag gacagcagca ggaacatgta
     4141 cagatactcg ttccacgcca gcagcagcgc gtaggtcccc accgccacca tcgccggctt
     4201 catcagcgga aggtagatcc gccagtagat cgcccaggga gacgcgccgt cgatccgcgc
     4261 cgcctcatcc agctcgatcg ggatgctggt gccgtattgc tgaaagataa aaatcgcata
     4321 cggcgtcgcg aacgtaacct cgacaaggat caccgcccac aaactgtccg acaggccgta
     4381 gttctgcatc acccgataga acgggatcgc caggaatgac atcggaatga catatgtcaa
     4441 cagcgcggcg ttgctgacca gccaactgaa gcgcaaccgc agccgcccca ggacaaagct
     4501 ggtcagcgtg ccgatcgcca gggtcaatgc gcaagtggcg gcaccgatga tcaggctatt
     4561 gcccatctcg tgccagaaat gcgcgacata ccagtaattc tgcgtcagca ccgtccagaa
     4621 accggccagc gtcgggttcg ccggccacag gtctccactg aagatgttgt ccttctgctc
     4681 cagcgcgacc tcgaccatgc tgtacagcgg cgtcaccgtc cagatcagga tcaacacgca
     4741 gatgacgctc tccaccgcca acgcgatcgg ccggcgccac ggccgccggc gcgtcgagcg
     4801 gcggcggccc gccggcatat gtccagccgt ggtggcgctc atagctgcac ctcggtcttt
     4861 gccagcttgc gcatcagcac gatcaccagc gggatcagca acggcagcgc cgacatcacc
     4921 gccgccatgc caagctgcgg attatccacc tcgaaagcat cgcggaaacc cagcgtggcg
     4981 agcacatggg tggacagcga cggcccgccg ccggtcacga aatagatcgt gttgaaatca
     5041 cccaacgtcc agatcgtcga aagcagcgtg cagatcagat acaggttggc gagcagcgga
     5101 aacgtcacgc aggtgaaccg tttcagcccg accgccccat ccaccgcggc cgattcatac
     5161 agctcctgcg ggatcgccat ccgcccggcc agcaggatca ccgtccagaa cggcatccac
     5221 ttccagatat aggcgaccag cgacgacccc agggcgagcc agcgatagtt cagccacgac
     5281 ggcccatcca ggccggtgac ggcgtacagc gcgttgttga tgaaccccca ttcgccgttc
     5341 agcatccagt ggaaggcgat gaaggtgggg atcgccggca ccg
//
LOCUS       DATAVD010001453         2005 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_322659, whole genome shotgun sequence.
ACCESSION   DATAVD010001453 DATAVD010000000
VERSION     DATAVD010001453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322659"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..783)
                     /locus_tag="VHX39_27835"
     CDS             complement(46..783)
                     /locus_tag="VHX39_27835"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEX3995003.1"
                     /translation="MNEPTNSGGRTLSAVIFDVDGVIVASPHEQAWREALAGIADPAR
                     LTTAVYQTYVAGKPRMDGARAALAQLGIADPGGLAEKYAEAKQRLVETLIAAGRFAAF
                     PDALRFIEAVHRPGWRLALASSSKNAASMLQQIVMPSGQNLLTLFDANLSGIDLQHGK
                     PDPEIFLRSAKAIGIPPANCLVVEDATAGVAAGVGGGMATLGVARLGDAALLRDAGAD
                     LVVSGLDEVDTAALAEGWLRAHPQRRP"
     gene            complement(1062..1586)
                     /locus_tag="VHX39_27840"
     CDS             complement(1062..1586)
                     /locus_tag="VHX39_27840"
                     /inference="COORDINATES: protein motif:HMM:NF020909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1993 domain-containing protein"
                     /protein_id="HEX3995004.1"
                     /translation="MATSLFDLSVPTFLQTISAIAGFLDRAARHCAETGTDPDDFVDA
                     RLIDDMAPFHFQIEAAWHHAVWGVEALKTGAFTPPPLVGPVPFAELQAMIRKAELTLQ
                     AFTPEEVDSWAGKDLDLQIGPRRLAFTSESFILSFSLPNFHFHAVTAYDILRSLGVPI
                     GKRDYEGRLRVRMG"
     gene            complement(1778..>2005)
                     /locus_tag="VHX39_27845"
     CDS             complement(1778..>2005)
                     /locus_tag="VHX39_27845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995005.1"
                     /translation="GPLAKPRKVDGTPSGRLMPGSMADRSPAQLRAHAAKYRVMARTT
                     VSAATVTSLLRLADRFDALAKQREDVRDSVT"
BASE COUNT          374 a          620 c          636 g          375 t
ORIGIN      
        1 agtccagccg ggttcggcgg tcgctgtgaa tgcgtcgtgc atggctcagg gtctccgttg
       61 cggatgggcg cggagccaac cctcggccag cgcggcggtg tcgacctcgt ccaggccgga
      121 cacaacaaga tctgcgccgg cgtcgcgcag cagggccgca tcgcccagac gtgccacgcc
      181 caaagtggcc atgccgccgc cgacgcctgc cgcgacgccg gctgtcgcgt cctccaccac
      241 gaggcagttt gccggtggta ttccgatcgc cttggcggat cggaggaaga tctccggatc
      301 cggcttgcca tgttgcaaat cgatgccgct caggttggcg tcgaacaggg tcagcaggtt
      361 ctgcccggac ggcatcacga tctgctgcaa catcgaagcg gcatttttcg aggatgaggc
      421 cagggcgagc cgccagccgg gccggtgtac cgcctcgata aaacgtaatg cgtcggggaa
      481 ggcggcaaac cggccggcag cgatcagcgt ttcgaccagc cgctgcttgg cttcggcgta
      541 cttttcggca aggccacccg ggtcggcgat ccccaactgc gccaacgcgg cgcgcgcccc
      601 gtccatacgc ggcttgccgg cgacgtaggt ctggtagact gccgtggtca gacgcgcggg
      661 atcggcgatg ccggccagcg cctctcgcca tgcctgctca tgcggcgagg caacgatcac
      721 gccatccaca tcgaagatga cggccgagag ggtgcgtccg ccggaatttg ttggttcgtt
      781 catggcggtg ttatcgtcgc cgttcgcgtg ccgggtccag tgtcatcgcc acattttcgt
      841 gctgttgatt atgcaatctc gatggtgcag ccgtccgcac caatgacagt gagacacaga
      901 cgctgttctc gcggcccggc aggtcgatcc agcggtcgga tgtgcccgcg cgatagattc
      961 cgagggaccg cagtcgacga caatgcagcc gttgaaccat gctggagcga tgcccgaaag
     1021 cggtcactcg tagaagtgta aattgttaga gcgaattcaa cctatcccat cctaacgcgc
     1081 agtcgcccct catagtcgcg cttgccaatt ggtacgccca gagagcgcag aatgtcgtaa
     1141 gcggtgacgg cgtggaaatg gaaattcggc agcgagaacg acaggatgaa gctctctgac
     1201 gtgaaggcga gccttcgcgg accaatctga aggtccaaat ccttgcccgc ccaactgtcg
     1261 acttcttcgg gcgtgaacgc ttgtagcgtc agttccgctt tgcggatcat cgcctgaagt
     1321 tcggcaaacg ggaccggtcc gacaagcggt ggcggtgtga atgctccggt cttcagagct
     1381 tccactcccc acacagcgtg atgccacgcc gcctcgatct ggaagtggaa cggtgccatg
     1441 tcatcaataa ggcgcgcgtc gacgaagtcg tccggatcag tcccagtttc tgcgcaatgc
     1501 ctggccgccc ggtcaaggaa gcccgcaatc gcgctgatgg tctgcaagaa cgtcggtacg
     1561 ctcaggtcaa agagtgatgt tgccattggc tctcccttgc ctgaaggggt gtcagttatt
     1621 gccgttcgaa gcacacgctt gtagcgagca cgatggcagg tttcaaaaaa taatgagcca
     1681 aaagtcgcct gtccggcccc aaccacagcg gtcctacgcc tgggcgcaaa cggcttcgtg
     1741 ccgaccactt cgctcagccc aaagcccgct ggctgcttca ggtcactgaa tcgcggacgt
     1801 cttcgcgttg tttggccaac gcgtcgaagc ggtccgcgag gcgcaacagg ctggtgaccg
     1861 tggccgcgga aacggtcgtc cgcgccatca ctcgatattt ggctgcgtgt gcgcgaagct
     1921 gagcaggcga ccggtctgcc atcgagccgg gcatcaaacg gccggaaggc gtgccgtcga
     1981 ccttgcgcgg ttttgcaagc gggcc
//
LOCUS       DATAVD010001454         2482 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3299103, whole genome shotgun sequence.
ACCESSION   DATAVD010001454 DATAVD010000000
VERSION     DATAVD010001454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2482
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3299103"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..607
                     /locus_tag="VHX39_27850"
     CDS             <1..607
                     /locus_tag="VHX39_27850"
                     /inference="COORDINATES: protein motif:HMM:NF020135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ketopantoate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HEX3995006.1"
                     /translation="KRPNVTSFYVGEPSGMITKRSRELAAIMNDCDTAKATDNLWGER
                     WTKLCVNAMRNGVSAATGMGGNERDRHDAVRRVCIALGGESVRVGQRLGYKLGLIGSL
                     PPESLARAMEGDKAAITEIDKLMLGGTGEDQRASYQRPSMAQDMAKGRRTEIELMNGF
                     IAAEGARVGVAAPANEMITRQVLRVERGEIPPRPENVLVNT"
     gene            926..1894
                     /locus_tag="VHX39_27855"
     CDS             926..1894
                     /locus_tag="VHX39_27855"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3995007.1"
                     /translation="MSGERKRPLKVGLVLPTVGEWMAGATARWKDMVTIARHAEDIGF
                     DSIWINDHLYFRWGAPHDPTRGTWECWSLLSAIAAITTRVEIGTLVVGTGFRNPALLA
                     KAADAVDDISGGRLVLGLGAGYHEPEYRAFGYPYDHLVSRFEESLIIIHTLLREGNID
                     FNGKYHQARDCELVPRLSPRNGPPILMGPRPNSPRMLGLMAKYADYWTAVLVHDMETY
                     QPMKEAVDAACLKAGRDPSTLMRTVMPSVNVPGLEASRDMTSWVRPFRLSYNRGDPLT
                     GSVDAVSDQIRAFAAAGVSHMPVWLDPLSIQGIDGFARVLEALDRA"
     gene            2043..>2482
                     /locus_tag="VHX39_27860"
     CDS             2043..>2482
                     /locus_tag="VHX39_27860"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEX3995008.1"
                     /translation="MTAPPTRRVVVAPSLLAADFGRLREEMASVTEAGADWLHFDVMD
                     GHFVPNMSFGPLVVAALRPHSTLPFDVHLMITPVDPFVTAFAEAGADHILFHPEAGPH
                     PHRTLQLIRSLGKKTGVVLSPGTPVESIAWPLELVDIVLVMSVNP"
BASE COUNT          472 a          755 c          775 g          480 t
ORIGIN      
        1 caaacggccg aacgtcacct cgttctatgt cggcgagccg tccggaatga tcaccaaacg
       61 gtcacgcgag ctggccgcga tcatgaacga ttgcgacacg gccaaggcaa ccgacaacct
      121 atggggcgag cgttggacca aactgtgcgt caacgcaatg cgcaacggtg tgtccgctgc
      181 caccgggatg ggtggcaacg aacgcgaccg gcacgatgcg gtgcgccggg tttgcatcgc
      241 actcggcggt gaatccgtgc gtgtcggtca gcggcttggc tacaaactgg gcttgatcgg
      301 cagtctgccg ccggaaagcc ttgcccgcgc catggaaggc gacaaggcgg caatcaccga
      361 aatcgacaag ctgatgcttg gcggcaccgg cgaggaccag cgggcgtcgt atcaacgccc
      421 ctcgatggcg caggacatgg cgaagggtcg ccgcaccgag atcgagctga tgaacggctt
      481 catcgccgcc gagggcgccc gcgttggcgt tgccgcgccg gcgaacgaaa tgatcacgcg
      541 ccaggtactg cgggtggaac gcggggagat tccgccgcgg cccgagaacg tgctggtgaa
      601 tacatgagtt ctccacacgg cattgtttgg gccacctggg caggatcgca atcgttgctg
      661 cgtgccgagc ctgctctgcg atctcaacgc aagttcattc gcattcccgc cgactgaggg
      721 ccgggcggac cctctggtgg ctggaatgcc gtcaaagcgc gaatgaattg tgcaatgtta
      781 cgatgcaggg gtactgcgcc gcaccactat ccttcgacga tgctgccacg cctcggccgg
      841 ggggaaggac aaggccggcg accttgcaat acttaatatt ttcggtcagc atcccttaac
      901 gcaaacagcg tcagggagta ccgcaatgtc cggggaacgg aagcgcccgt tgaaagttgg
      961 gctggtgctg cccacagtgg gggagtggat ggccggtgca accgcgcgat ggaaagacat
     1021 ggtcaccatc gcccgccatg ccgaggatat cggattcgat tcgatttgga tcaacgatca
     1081 tttgtacttc cgctgggggg cgccgcacga tcctactcgt ggcacgtggg agtgttggtc
     1141 gctgctgtcg gctatagctg ccattacaac tcgcgtggaa attggaactc tcgttgttgg
     1201 aaccgggttc agaaatcccg cccttctcgc gaaagctgcc gacgcggtcg atgatatcag
     1261 tggcggccgt ctggtattgg gccttggcgc cggataccac gaaccggaat accgggcctt
     1321 cggttacccg tatgatcacc tggtcagccg gttcgaggaa tccctgatca tcattcatac
     1381 cttgttacga gaggggaata tcgatttcaa cggcaaatat catcaggcgc gagactgcga
     1441 attggttccg cgtctctcgc cgcgaaatgg ccctccgatc ctcatggggc cacgcccgaa
     1501 cagcccgcgg atgctgggcc tgatggcgaa atacgccgat tactggaccg ccgtcctggt
     1561 ccacgacatg gagacctacc agccgatgaa ggaggcagtg gacgctgcct gtttgaaagc
     1621 gggccgcgat ccctcgacgt tgatgcgaac agttatgccg tcggtcaacg tgccaggact
     1681 cgaagcatct cgcgacatga ccagttgggt gagacccttc cgcttatcat acaatcgagg
     1741 cgacccgttg accggatcgg tcgatgcggt atccgatcaa attcgcgcgt tcgccgccgc
     1801 cggcgtgagc catatgccgg tctggctgga tccgctgtcc atacagggca tcgacggctt
     1861 cgcaagggtg ttggaggcat tggacagagc gtgatcagct gacttctgca cgcctggcgg
     1921 cgctgctccc gggcatgagg gtcaaggtcc tcccgttgct gccatcccat cccggtcagc
     1981 aagcttctcg cccgatgcca gccgccttgt gcgccgccgc ccccgatgcc aggtaacatg
     2041 gcatgaccgc tccccccaca cgtcgagtcg tggtcgcacc cagtctgctg gcggcagact
     2101 ttgggcggct gcgtgaggaa atggcgtcgg tcaccgaggc cggcgccgac tggttgcatt
     2161 tcgacgtcat ggacggtcat ttcgtcccca atatgagctt cggcccgttg gtggtcgcag
     2221 ccttgcgccc ccattccacg ctgccattcg acgttcatct gatgatcacc ccggttgacc
     2281 cgtttgtcac agcatttgcc gaggcgggtg ccgaccacat cctgttccac cccgaggccg
     2341 gaccgcatcc acaccgcacg ctgcaactga tccgttcgct cgggaaaaag actggcgtgg
     2401 tgctcagtcc gggcacaccg gtcgaaagca ttgcgtggcc gctcgaactg gtcgacatcg
     2461 tgttggtgat gtcggtcaat cc
//
LOCUS       DATAVD010001455         2754 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1998943, whole genome shotgun sequence.
ACCESSION   DATAVD010001455 DATAVD010000000
VERSION     DATAVD010001455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2754
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1998943"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..241
                     /locus_tag="VHX39_27865"
     CDS             <1..241
                     /locus_tag="VHX39_27865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="homospermidine synthase"
                     /protein_id="HEX3995009.1"
                     /translation="LQVTAAVLAGIVWAIEHPTEGVVEADQLDHSRVLEISGPYLGEV
                     VGEYSDWTPLRDRGSLFPEPVDTDCPWQFGNFRVT"
     gene            complement(271..1164)
                     /locus_tag="VHX39_27870"
     CDS             complement(271..1164)
                     /locus_tag="VHX39_27870"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3995010.1"
                     /translation="MQAGFLGVGNMGLPMAGKLLDGGHSLTVFDIRDAAMQPLLERQA
                     RKAASPKDLADQCEIVFVSLPTLAAFRAVAFGPDGLANGSAMKLLVNTCTIGVPFVKE
                     VEQAMAAQGVTVVDCPISGGPPGARAGTLSVMVSGDPAAVERIRPMISLWGRTLTVAG
                     DKPGAAQVLKLTNNILSAVALAATAEAFVMGAKGGLDPEVMLAAINAGSGRNSATEAK
                     FPAAVLTRSFDYGAEMHILMKDIDLAIAQGEELGVPMWVCEAARLVFKHAMHKGASKQ
                     DLTAIVKYIERDAGFEIPKTR"
     gene            complement(1274..2284)
                     /locus_tag="VHX39_27875"
     CDS             complement(1274..2284)
                     /locus_tag="VHX39_27875"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3995011.1"
                     /translation="MSGNFELTLPLPGANFGGRADVIGKTGARQVVEAAEAEPDTLPR
                     ALAESGGLLLLQGLDDMASEPELLVRLSHIFGPEVEDYRQTLTPLNMVHETVPEIFIV
                     SNIPPVSRMPPRRPDPPLTEDGKLPTRFPHRRGWHTDQSYRRPPPDVSLFLGVGPVRR
                     DQGQTLFADGTAAYEALSAKLRARVDGLQGIHVSLSAKRSRDEVLTGATPRALGPHEQ
                     PQRQPVVRVHPVTGKRALYLCEYGQMDWLEGPFVGMQPGPHGDGAELLFELMSHLTRP
                     EFIYVHEWTRGDLIVWDNRCLVHAATWFDAEKEGRMMWRTTVSGNPGAAYAGERKSWV
                     MA"
     gene            2452..>2754
                     /locus_tag="VHX39_27880"
     CDS             2452..>2754
                     /locus_tag="VHX39_27880"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX3995012.1"
                     /translation="MGPLLVDYLLYEPEDSGILWIKFNRPERMNALVGTAEENSTVAK
                     VGEYMRAGDDDPNVRVIILTGVGRGFCSGANLASRENPGENFPGNRSPHEGLDGTRQ"
BASE COUNT          501 a          863 c          862 g          528 t
ORIGIN      
        1 tttgcaagtg accgctgctg tgctggcagg tatcgtgtgg gcgatcgagc atccgactga
       61 gggcgtggtt gaggccgatc aacttgacca ctcccgcgtg ctggaaatct ctgggccgta
      121 tctgggcgag gtggttggtg agtatagcga ttggacaccg ctgcgtgatc gcggttcgct
      181 gttcccagag cctgtggaca cggattgccc ctggcagttc ggcaatttcc gcgtcacgtg
      241 accgcgctat tcggtgttga tgtcaaagtt tcaccgtgtc ttcgggatct cgaacccggc
      301 gtcgcgttcg atgtatttca cgatggcggt caggtcttgc tttgatgcgc ctttgtgcat
      361 ggcgtgtttg aagaccaggc gcgctgcctc gcacacccac atcggcacgc ccagttcttc
      421 gccctgggcg atggcgaggt cgatgtcttt catgaggatg tgcatttcgg caccgtaatc
      481 gaagctgcgc gtcaatacgg cggcgggaaa ctttgcctcg gtggcgctgt tgcgtccgct
      541 gccggcattg atggcagcga gcatcacctc agggtcgagc ccgcctttgg cgcccatgac
      601 gaacgcctcg gctgttgcgg cgagagcgac agcggacaga atgttgttgg tcagcttcaa
      661 cacctgcgcg gcaccgggtt tgtcgccggc cacggtcagc gtgcggcccc acaacgaaat
      721 catcggccgg atgcgttcca cagcggcggg atcgcctgag accatgacgg ataacgtacc
      781 ggctcgggcg cccggcggcc cgccggaaat cgggcaatcg acgaccgtga cgccctgggc
      841 tgccatcgcc tgctcgacct ccttcacgaa gggaacgccg atggtgcagg tgttgacgag
      901 gagtttcatg gctgagccgt ttgccaggcc atcgggaccg aaggcgacgg cgcggaaggc
      961 ggccagcgtg gggagggaga cgaagacgat ctcgcactga tcggccaggt cctttgggga
     1021 agccgctttt ctggcctggc gttcgagcaa gggctgcatg gcggcatccc tgatatcgaa
     1081 aacagtcagg ctgtggccgc cgtcgagcag tttgccggcc atgggcaggc ccatgttacc
     1141 gacgccgaga aatcccgctt gcattggggt gtccttccga gtgagggtgc tgacgctgac
     1201 acaaagttgg cgttgttgca ttaacgcgat ggttcaggcc tgggcgccat cgcccgctgt
     1261 ctcaacggtc cgctcatgcc atgacccaac tcttccgctc ccccgcatag gccgcgccgg
     1321 gattgccgct gacggttgtg cgccacatca tccgcccctc cttctcggcg tcgaaccagg
     1381 tcgcggcatg gaccaggcag cgattgtccc agacaatcag gtcgccacgg gtccactcat
     1441 gcacgtagat gaactcgggc cgcgtgaggt gcgacatgag ttcgaacagc agctccgcgc
     1501 cgtcgccatg cgggcccggc tgcatgccga cgaaagggcc ctccagccaa tccatctggc
     1561 cgtactcgca caaatacaac gcgcgctttc cggtcaccgg atgcacccgt accacaggtt
     1621 ggcgttgcgg ttgctcatgc ggccccaacg cgcgcggtgt cgcaccagtc agcacttcgt
     1681 ctcgactgcg tttcgcactc aaggacacgt gaatgccttg cagcccgtcg acgcgcgccc
     1741 tgagtttagc tgacaacgcc tcgtacgccg ccgttccatc agcgaacaga gtctgtccct
     1801 gatctcgtct gaccggacca acgcccagga acagcgaaac atccggtggc ggacggcgat
     1861 agctctgatc ggtatgccaa cctcgccgat gtggaaaccg tgttggcagc ttgccgtcct
     1921 cggtcaatgg cgggtcgggc cgccgcggcg gcatccggct gaccggcgga atgttcgaga
     1981 cgatgaagat ctccggcacg gtctcgtgca ccatgttcaa cggtgtcagt gtttgtcgat
     2041 aatcctcgac ttccggaccg aagatgtgac tcagacgcac cagcagctcg ggttcggatg
     2101 ccatgtcgtc caggccttgc aacagcaaga ggccgccact ttccgcaaga gcgcgtggta
     2161 gcgtgtcggg ctcggcctct gccgcctcga cgacttggcg cgcgccagtc ttgccaatca
     2221 catcggctcg accgccaaag ttggctcctg gtaaaggcag ggtaagttcg aagttgccgc
     2281 tcatggggca cctgttttca tgggaaggaa ccaaaccgta tccaagcgat ggcgcaggtc
     2341 aatgcggcgt cggctcgcga ggcttccctt gccaccaaag cgcccgccat cccacaatcg
     2401 acgccaatac cacgcagccg tgaggccgcc atcgccacgg aggaaacacc catgggacca
     2461 ctcctggtcg actatctgct ctacgaaccc gaggactccg gcatcctctg gatcaaattc
     2521 aaccgtcccg agcggatgaa cgccctcgtc ggaaccgccg aggaaaacag caccgtcgcc
     2581 aaagtcggtg aatatatgcg agcaggcgat gacgacccca acgtccgggt catcatcctg
     2641 accggtgtgg gccgcggctt ttgctcgggc gccaatctgg cgtcgcggga aaatccgggg
     2701 gagaattttc ccggcaatcg cagcccgcat gaggggctgg acggcacgcg gcaa
//
LOCUS       DATAVD010001456         2905 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3676454, whole genome shotgun sequence.
ACCESSION   DATAVD010001456 DATAVD010000000
VERSION     DATAVD010001456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2905
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3676454"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..291
                     /locus_tag="VHX39_27885"
     CDS             <1..291
                     /locus_tag="VHX39_27885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEX3995013.1"
                     /translation="DRHRDVADWENFVRRVFIELARVMRQGGWVAFEVGEVRGGRILL
                     ERHVIAAIAGLPFQVAGVMVNQQSFTKTANCWGVSNNSGGTNSNRIVLARRV"
     gene            442..1026
                     /locus_tag="VHX39_27890"
     CDS             442..1026
                     /locus_tag="VHX39_27890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995014.1"
                     /translation="MNQTRKWRHNKPNAARFLWSTLFLLVCHGAALAAEEVAISAAEI
                     SAEINAKGAKAVITRLSSAHVNAMGQSDWSRTMDQIWNGRVAFIALAPKLAQGADGKS
                     AEDLSTALARALPAAPEAVLRVIDRRNGPVLGVGRICAVPFAEPSSQDTSGYLRAAQS
                     AVDDVDTPRLQHVRAACLDQLALAARQLDPRPGK"
     gene            complement(1037..1501)
                     /locus_tag="VHX39_27895"
     CDS             complement(1037..1501)
                     /locus_tag="VHX39_27895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995015.1"
                     /translation="MRLFHAFLLLPLCGAPVFAQSVGPAAAAHHGRRSAAEHFADANT
                     THDGHLTLDQATSGYKSIAKSFNQIDVAHHGYITMDDIKSWRAAKKAARAAAKHAASD
                     AEDGIVRPGDGQLLMGAHPLQTSTDMIVPAPTEPRRTGVDLPIAPVDGNNPS"
     gene            complement(1580..2653)
                     /locus_tag="VHX39_27900"
     CDS             complement(1580..2653)
                     /locus_tag="VHX39_27900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine aldolase family protein"
                     /protein_id="HEX3995016.1"
                     /translation="MATLYAPARIDPALPPLRVNLYSDTQTKPSPGMKAAMMEADVGD
                     EQHGDDPAVHELCDRMTDLLGKEAAVFLPSGTMCNQIAILTHCRGGDEILAHELSHII
                     ANEGGGPGALTGAVVLGLKGERGQFDPETIRAALREPRRNAPPQTLLEVEQTANAGGG
                     SVWPLDKLNAVMDTAHEAGMRTHMDGARLMNAVVASGVPAHEMVAKCDSVWLDFTKGL
                     GAPLGAVLCGTSIFIDEAWRWKQRLGGSLRQAGICAAACTYALEHNIDRLAEDHANAR
                     VLARGLAQVEGLIVEEPETNLVFFDTRGAGMTADELADRIRLDGVQVSTVGKYRVRAC
                     THLDVDRAGVELAIQVIREKISR"
     gene            complement(2669..>2905)
                     /locus_tag="VHX39_27905"
     CDS             complement(2669..>2905)
                     /locus_tag="VHX39_27905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007400307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX3995017.1"
                     /translation="DRIDVRYEKGPFKYLNNHWLFLPHPGGTEVDFFVDFEFNSRILQ
                     AAIGVVFNEAVRRMVAAFHKRAIAVYGPPKAPVA"
BASE COUNT          545 a          880 c          924 g          556 t
ORIGIN      
        1 gatcggcatc gtgacgtggc tgactgggaa aatttcgtgc ggcgcgtgtt catcgaactc
       61 gctcgcgtga tgcggcaggg cggctgggtt gcgttcgagg ttggcgaagt gcgcggcggc
      121 aggatattgc tggagcgtca cgtcattgca gcgatcgccg gtttgccgtt ccaggtggca
      181 ggcgtgatgg tcaatcaaca gtcgtttaca aaaactgcaa attgctgggg cgtcagtaac
      241 aactccggcg ggaccaactc caaccggatc gtgctggcgc ggcgtgtctg acaggatcgt
      301 gcttaatcca atcttgcgat catgtccgat ctgttgcatt gcgggcaatc gacacacgcg
      361 ttctgcggtt tttgcgccgc aagcggcggt tggggaagcg gcggtcgtat gggcgtgacg
      421 gcgggaccat aggctatgag aatgaatcag acacgcaaat ggcgacacaa taagcccaac
      481 gcggcgcgct tcctttggtc gaccctgttc ttactggtct gtcatggcgc tgcccttgcc
      541 gccgaagagg tcgcaatatc cgccgccgaa atcagcgccg agatcaatgc gaagggcgca
      601 aaagccgtga tcactcggct cagtagtgcg catgtcaacg cgatgggcca gagtgactgg
      661 agccgcacaa tggaccaaat atggaacggg cgtgtggctt tcatcgcgct ggccccgaaa
      721 ctcgcgcaag gcgcggacgg aaagtcggcc gaggatttga gcactgcact tgcccgtgca
      781 ttgccggccg caccggaggc ggtgttgcgt gtgatcgatc gtcgcaacgg ccccgtactc
      841 ggcgtaggcc gcatctgcgc cgtaccgttc gccgagccat cgagccaaga tacgtccgga
      901 tatctccgtg ccgcgcagtc ggcagtcgat gacgtggaca cgccaaggct gcaacatgtc
      961 agagcggcct gcctggacca gctcgctctg gcggcaaggc aactggaccc gcgaccagga
     1021 aagtagatgc ccagtgctac gacgggttgt taccatcaac cggcgcgatc ggtaggtcga
     1081 cgccggtccg ccgcggctcg gtaggcgccg gcacgatcat gtcggtcgag gtttgcaatg
     1141 gatgcgcgcc catgaggagt tgcccgtcgc ccggtcgcac aatgccgtcc tccgcatccg
     1201 aggccgcatg tttagccgcc gctcgcgcgg ctttcttggc cgctcgccac gacttgatat
     1261 cgtccatggt gatgtagccg tgatgcgcga cgtcaatttg attgaacgat ttggcgatcg
     1321 acttgtagcc ggaggtcgcc tggtcaagcg tcaggtggcc atcatgggtc gtattcgcat
     1381 cggcgaaatg ctccgccgcg ctgcgcctgc cgtgatgcgc ggcggcagcc ggtccgacgg
     1441 attgggcgaa caccggagcg ccgcacaaag gcagcagcaa aaaagcgtga aacagacgca
     1501 tggcggaaac cctcctggtc gagcaatttg ctccgggaac ctgccgccaa atccctaacg
     1561 ttcggtgaat atgccgggac tatcgcgaaa ttttttcgcg gatgacctgg atcgccaact
     1621 cgaccccggc gcggtctacg tccaaatggg tgcaggcgcg cacccggtat tttccgaccg
     1681 tagagacctg cacgccgtcc agccggatgc ggtcggcgag ctcatcggcg gtcatgccgg
     1741 cgccgcgcgt atcgaagaac accaggttgg tctccggctc ttccacaatc agaccctcaa
     1801 cctgggccag gccacgcgcc aggacacgcg cgttggcgtg atcctccgcg aggcggtcga
     1861 tattgtgctc cagcgcataa gtgcaggcgg ccgcgcaaat ccccgcctgg cgtaacgagc
     1921 cgcccagacg ctgtttccag cgccacgcct cgtcaatgaa aatgctggtc ccgcacagca
     1981 ccgcgccaag cggcgcaccc aatcctttgg tgaagtcaag ccagactgag tcgcatttcg
     2041 caaccatttc gtgcgccggc acgccggagg caacgaccgc attcataagt cgtgcgccgt
     2101 ccatgtgggt gcgcatcccg gcctcgtgcg cggtgtccat gacggcgttg agtttgtcca
     2161 atggccagac cgaaccgccg cccgcattgg cggtttgttc aacttccagc agggtttgcg
     2221 gcggggcatt gcggcgtggt tctcgcaagg cggcgcgaat ggtttcggga tcgaactgtc
     2281 cccgctcgcc tttcaggccc agtacgacag cgccggtcag tgctcctggg ccgccgccct
     2341 cattagcgat gatatgtgac aattcatgcg ccaggatctc gtcgccgccc cggcaatgcg
     2401 tgaggattgc aatctgattg cacatcgtgc cggagggcag gaacaccgca gcctccttgc
     2461 ccagcaaatc tgtcatccgg tcgcacagtt catggacggc gggatcgtca ccgtgctgct
     2521 catcgccgac atcggcttcc atcatcgccg ccttcatccc gggcgagggt ttggtctgcg
     2581 tgtcggaata caggttcacc cgcaacggcg gcagcgcggg gtcgatgcgg gcgggggcgt
     2641 agagagtggc cattcggggc agctccgttc aggcgacagg tgctttcggc ggaccgtaga
     2701 ccgcgatggc ccgtttatgg aaggcggcaa ccatccggcg caccgcctcg ttgaatacaa
     2761 ccccgattgc ggcctgcagg atgcggctat tgaattcgaa atcgacaaag aaatcgacct
     2821 ctgtgccgcc agggtgcggc agaaacagcc agtggttgtt gagatatttg aatggaccct
     2881 tttcgtaacg gacatcgatc cggtc
//
LOCUS       DATAVD010001457         5447 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2185808, whole genome shotgun sequence.
ACCESSION   DATAVD010001457 DATAVD010000000
VERSION     DATAVD010001457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5447
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2185808"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1107)
                     /locus_tag="VHX39_27910"
     CDS             complement(<1..1107)
                     /locus_tag="VHX39_27910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995018.1"
                     /translation="MVDLFIRGDTVVTPQGVGAYDIAIAGEKIIGVAASGSFPVPPNA
                     RVIDATGKIVMPGGIDPHVHCKWHLPNPDGSAGLTEPPDIVSKAAVHGGTTTMIDFTR
                     ASQGANVRDAIEKREQDWKGHCACDYAQHIMVEGALPVDLPGQIGEAIQAGFPTVKIF
                     TTDITPSRRGRMVDFGDIWEIFQILAANQGLGVIHSEDNDIVMHMYAKLIREDRTSFH
                     NLAEVHNTLSEDISFRRVIRLAEKIKGTALYMMHVSAGTGVQAIREARSRGAPIYGES
                     LHQYMLYTSEDYQRTNGQIYHTYPSLKSPEDQAELWAGTLDGSINCVATDEICCTLAK
                     KLQGARIDDTTGGNAGVEPRVSLMYTEMVGRRGYS"
     gene            1106..2287
                     /locus_tag="VHX39_27915"
     CDS             1106..2287
                     /locus_tag="VHX39_27915"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX3995019.1"
                     /translation="MMFPPPVGGIIPLPAKRGKMEQTFDVVVIGAGIAGASVAAFLSE
                     HCRVALLEAEEAAGYHTTGRSAALWTANYGPRDVRLLTQLSRAFFETPPEGFTAVPLL
                     RRRPVLFLAQAHQLPDLEQAVAEGTGLRRVTVAEAKTMLPPLRDGFAAGAAVEDDAFD
                     LDVSAIHQGFLRQLGNRNGILALRNRAGRITRASGAWQVETSSGAVFHAGVVVNAAGA
                     WGDDVAEIAGAAPIGLLPKRRTAAIIDPSPWDAEHWPMILDVSEDWYARPEARTRLMV
                     SPADETLTYPHDVQPEEIDIATGIDRMQRALAIEVRRVEHSWAGLRTFTPDGSLAFGW
                     DHGQEGFFWCVGQGGYGIQTSPAAGRLAADLVLGRSPGIAAPAVEAIDPQRFQGATPA
                     A"
     gene            2350..2670
                     /locus_tag="VHX39_27920"
     CDS             2350..2670
                     /locus_tag="VHX39_27920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020591454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEX3995020.1"
                     /translation="MDDDAVFRALADPSRRQLLDRLHAKNGQTMGELCDGLDMTRQAV
                     AKHLAILEDANLVSHKRQGREKLHFINPVPINDIAERWIGKFEQPRLSALSRLKKSLE
                     GEDR"
     gene            2667..3158
                     /locus_tag="VHX39_27925"
     CDS             2667..3158
                     /locus_tag="VHX39_27925"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEX3995021.1"
                     /translation="MTKQANTTFVYVTFIRTTPETLWSALTTPEFTRQYWFGMHQESD
                     WSVGSPWRLVFADGRTADAGEIIEVDQPRRLVIKWRNEFREELKAEGYARCVFDLESI
                     GEAVKLTITHSMERDDSQLIGAVSGGWPRILSNLKSLLETGASLLPATQPSQRSVCEA
                     AAV"
     gene            3247..4581
                     /locus_tag="VHX39_27930"
     CDS             3247..4581
                     /locus_tag="VHX39_27930"
                     /inference="COORDINATES: protein motif:HMM:NF039910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX3995022.1"
                     /translation="MLSEADNILLTRTGPKTPMGELFRHFWQPVLLSAELPEPDGAPV
                     RITILGEDLRAFRATDGSVGLVSPRCPHRGADLFFGRNEDGGIRCAYHGWKFATDGRC
                     LAMPTMDPGPARERAEQNIRLLTYQTCEAGGFVWAYLGPREHMPELPQLEFLTLPASR
                     VFVSKKLQQCNWAQACEGGLDTAHFSFLHMAVSDAADVTSQLMSKVSSTPDTVRWMRD
                     DGAPRFTIAEHPAGLVLGAARRGDPGQNYWRISQFLMPNHGLAPNAFPGENYHGQCWV
                     PIDDTSCWIHCYTWNPDRPLTAAERARFSAGSGVHAEVDHQYVPIRRRENDYLIDRVK
                     QKSETYTGIEGVSEQDACIQDSQGLIADRTVEHLGPTDMGVIRFRRLMLEAVRALQAG
                     QAPRAAASAKAYWVRSGGAIAPADMPLAQVMRARFGHEHGLCVDTVRAQVTA"
     gene            4603..4992
                     /locus_tag="VHX39_27935"
     CDS             4603..4992
                     /locus_tag="VHX39_27935"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3995023.1"
                     /translation="MRPQAEARVIRSAEVEPTSFGPLAEYRRMTGEDGLPVFTGVQTC
                     APGYATPLHWHPYVECLFVLEGEMEAFLEGQEAAPVRLGPGDMITLPACTPHVFRTFG
                     DRPLRILGIHASPTRIVNVVRDQSATL"
     gene            5112..5300
                     /locus_tag="VHX39_27940"
     CDS             5112..5300
                     /locus_tag="VHX39_27940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995024.1"
                     /translation="MCTTTSGTLTLEGMLNDPLIQAVRQSYGVPKREYEALLFRVKDT
                     LAERPWPPEASRGQLETA"
BASE COUNT          991 a         1730 c         1713 g         1013 t
ORIGIN      
        1 ggaataaccg cgccggccca ccatctcggt atacatcaac gacactcgag gctcgactcc
       61 cgcattaccg cccgtggtgt cgtcaatccg cgcgccctgc aatttcttcg ccagcgtgca
      121 gcagatttcg tcagttgcga cgcaattgat cgagccatcc agcgtgccag cccaaagctc
      181 cgcctgatct tcgggcgact tcagcgacgg ataggtatga tagatctgcc cgttcgtgcg
      241 ttggtaatcc tcgctggtgt aaagcatgta ctggtgcaac gactcaccat agatcggcgc
      301 accccgagac cgtgcctcac ggattgcctg cacgccggtt ccggcggaca catgcatcat
      361 atacagcgcc gtgcccttga tcttttctgc caggcggatc acgcggcgga acgaaatatc
      421 ttccgacagc gtattgtgta cttcggccag gttatggaag ctggtccggt cctcgcggat
      481 cagcttcgcg tacatgtgca taacgatgtc gttgtcttcg gagtgaatca ccccgaggcc
      541 ctgattcgcc gccaggatct ggaaaatctc ccagatgtcg ccgaaatcga ccatgcggcc
      601 gcggcggctg ggcgtgatgt cggtggtgaa gatcttcacg gtcgggaacc cggcctggat
      661 cgcctcaccg atctgtccag gcaaatccac cggcagcgcg ccttcgacca tgatatgctg
      721 ggcgtaatcg caggcgcagt ggcctttcca gtcctgctcg cgcttttcga tcgcatcgcg
      781 cacgttggcg ccttgcgagg cccgggtgaa gtcgatcatc gtggtagtgc cgccatgcac
      841 cgcagccttg ctgacgatat cgggcggctc cgtcagaccg gcgctgccgt cgggattggg
      901 caaatgccat ttgcagtgca cgtgggggtc gatcccgccc ggcatgacga tcttgcccgt
      961 tgcgtcgatc acgcgggcgt tgggcggcac cgggaaactg ccgctggctg cgacgccgat
     1021 gatcttttcg cccgcaatgg cgatgtcgta ggccccgacg ccctgaggtg tcaccaccgt
     1081 gtcgccacga atgaacagat cgaccatgat gttccctcca ccggttggcg ggatcatccc
     1141 gctcccggca aagcgaggca agatggagca aacgttcgac gtcgtggtga tcggggccgg
     1201 gatagcaggc gcgtcggttg ccgcgttcct gtccgagcat tgccgcgttg cgctgctgga
     1261 ggccgaggaa gccgcgggct accacaccac cggcaggtct gccgcgctgt ggacggcaaa
     1321 ttatggtccg cgcgatgtgc gcttgctgac gcagttgtct cgcgcgttct ttgagacgcc
     1381 gcctgagggt ttcaccgcgg tcccattgct gcgccggcgg ccggtgttgt ttcttgcgca
     1441 ggcgcaccaa cttcccgacc tggagcaggc ggtcgccgag ggcacggggt tacgccgcgt
     1501 cacagtcgcc gaagccaaaa cgatgcttcc cccattgcgt gatggctttg ccgccggtgc
     1561 tgccgttgag gatgacgcat tcgatctcga cgtcagcgcg atccatcagg ggtttctacg
     1621 ccaactcggt aaccggaacg gtatcctcgc gttacgtaat cgcgccgggc gaatcacgcg
     1681 tgcgtcgggt gcgtggcagg tggaaaccag ctcgggcgcc gtgttccacg cgggcgtcgt
     1741 ggtcaacgcc gccggcgcct ggggcgatga cgttgccgag atcgccggtg ccgctccaat
     1801 cggactgctg ccgaaacgtc gtactgccgc catcatcgac ccctcgccct gggacgctga
     1861 gcattggccg atgatactgg atgtttccga agactggtac gcccgccccg aggcgcgcac
     1921 ccgcctaatg gtatcccccg cggacgaaac gttgacctat ccgcacgatg tccagccgga
     1981 ggagatcgat atcgcgaccg gtatcgaccg catgcaacgc gctctcgcca tcgaagtccg
     2041 tcgcgtcgag cattcctggg ctggcctgcg cactttcaca ccggatggca gcctggcctt
     2101 tggctgggat cacggacaag aagggttctt ctggtgcgtg gggcagggcg ggtatgggat
     2161 ccagacctca cccgcggccg gccgtcttgc cgccgatctg gtattgggcc gcagtccagg
     2221 aattgccgca cccgcggtgg aggcgatcga cccacagcga tttcaaggcg ccacacccgc
     2281 cgcctgaatt cggttgccgt tcggtgcaaa agcgcttgac atgcaaccat tcggttgcat
     2341 attaacccca tggacgacga cgccgttttc cgtgcgctgg ccgatccgag ccgtcggcaa
     2401 ctgcttgacc gcctgcacgc gaagaacggt cagaccatgg gggagctgtg tgacggtctc
     2461 gacatgaccc gccaggcggt ggcgaagcat ctcgccattc tggaggacgc aaacctcgtc
     2521 tcgcacaagc gtcagggccg cgaaaagctg catttcatca acccggtacc gatcaacgac
     2581 atcgccgagc gatggatcgg caagttcgaa caaccgcgcc tgagtgcgct gtcacgcctc
     2641 aaaaaatcgc tggaaggaga agatcgatga ccaaacaggc caacacgacg ttcgtttatg
     2701 tcaccttcat ccggaccacc ccggagacgc tttggtcggc actgacgacg ccggagttca
     2761 cgcggcaata ctggttcggc atgcaccagg agtccgactg gtcggttggc tcaccctggc
     2821 ggttggtctt cgccgacgga cggaccgccg atgccggcga gatcatagag gtggatcagc
     2881 cgagaagact ggtcatcaaa tggcgcaacg agttccgcga ggagttgaaa gccgagggtt
     2941 acgcgcgctg cgtattcgac cttgagagca ttggggaggc agtgaaactc accattaccc
     3001 actcgatgga gcgtgacgac tcccagttga tcggtgcggt gtctggcggc tggccgcgca
     3061 ttctctcgaa tttgaagtcg ttgctggaaa ccggcgcatc tctgttgccg gccacgcaac
     3121 catcgcagcg cagtgtctgc gaagcggcgg cggtgtaacg gatccgcgcg gtggggtcgt
     3181 agccctcgaa ttctggcggt cccaccgcca tcagcctaaa atggagcaaa ccaggggaca
     3241 cccgccatgc tcagcgaagc cgacaacatc ctgctgaccc gcaccggccc aaagacgccg
     3301 atgggcgaac tgttccgcca cttctggcaa ccggtgctgc tcagcgcgga actgccggag
     3361 ccggatggcg ccccggtccg catcaccatc ctcggcgaag acctgcgtgc attccgagcc
     3421 accgacggct cggtcggtct ggtgtccccc cgctgtccgc accgcggcgc cgacctgttc
     3481 tttggccgca acgaagatgg cggcatccgc tgcgcctatc acggctggaa gtttgccacc
     3541 gatggacgtt gcctggccat gccgaccatg gaccctggcc cggcgcgcga acgggccgaa
     3601 cagaatatcc ggctgctgac ttaccaaacc tgcgaggccg gtggcttcgt ctgggcttac
     3661 ctcggcccgc gcgaacacat gccggaattg ccgcaactcg agtttctgac gctgcccgca
     3721 tcccgcgtgt tcgtctccaa gaagctgcag caatgcaact gggcgcaggc ctgcgaaggc
     3781 ggcctcgaca ccgcgcattt ttccttcctg cacatggcgg tgtccgacgc cgccgacgtc
     3841 acgtcgcagc tgatgagcaa agtctcgtcc accccggaca cggtgcgctg gatgcgcgat
     3901 gatggcgcgc ctcggttcac catcgccgag catccggccg gtctggtact gggcgctgcc
     3961 cgccgcggcg atccgggcca gaactactgg cgcatcagcc agttcctgat gcccaatcac
     4021 ggtctcgccc cgaacgcctt cccgggcgag aattaccatg gccaatgttg ggtgccgatc
     4081 gacgacacct cgtgctggat ccactgctac acctggaacc ccgaccgtcc actgacggcg
     4141 gccgagcgcg cccggttcag cgccgggtcc ggcgtgcatg ccgaggtcga ccatcagtac
     4201 gtcccgatcc ggcggcgcga gaacgactat ctcatcgacc gcgtgaagca gaagtcggag
     4261 acctacacgg ggatcgaggg cgtttcggaa caggacgcgt gcattcagga cagccagggc
     4321 ctgatcgccg atcgtacggt cgagcatctt ggcccgaccg acatgggcgt gatccggttc
     4381 cgccggctga tgctggaggc ggtgcgtgcc ttgcaagccg gccaggcgcc gcgggccgcc
     4441 gcctctgcga aggcgtactg ggtgcggtcc ggtggcgcca tcgctcctgc cgatatgccc
     4501 ctggcacagg tgatgcgcgc ccggtttggc cacgaacacg gattgtgcgt tgacacggtc
     4561 cgagcccagg tcacagcctg aattaaccag taggagccaa atatgcgtcc tcaggcagaa
     4621 gccagggtca ttcgatcggc agaagtggag ccgaccagtt tcggtcctct ggcggagtac
     4681 cgccgcatga ccggtgagga cgggctgccg gtctttaccg gggtgcagac ctgcgcgcct
     4741 ggttatgcca ccccgttgca ctggcatcct tatgtagagt gccttttcgt cctggaaggg
     4801 gaaatggaag cctttttgga aggccaggaa gctgcgccgg tgcggcttgg tccgggcgac
     4861 atgatcacgc ttccggcctg caccccgcat gttttccgca ccttcggcga tcggccgctg
     4921 cgcatactgg gcattcacgc ctctccgacc cggatcgtta acgttgtacg cgaccaatcc
     4981 gcaacactct gatactaaaa aatttctcac tgttaatacg ctggcatagt tggaacacaa
     5041 ttcaccatga tattgccatt cagagggggt taagtggtct cggcctcggc ccaaacggaa
     5101 tggagacagc gatgtgcacg acaacgtcag gcacactcac actggagggg atgctcaacg
     5161 acccgctgat tcaggcggtc aggcagagtt acggcgtgcc gaagcgagag tatgaggcac
     5221 tgctgtttcg cgtgaaggac acgttggcgg aacgcccgtg gccgccggaa gcctcgcgag
     5281 ggcagctgga gacggcctga agccgcaggc ggcactccga acctgcgcca cggtcgcatg
     5341 accgggcggg tcgaggcggc aaagcggcgt tgaacgaatg tgagggatgc cggctgtcgc
     5401 ggatggcgaa acccggtccg gagggctaca ctggcggcaa gctttgt
//
LOCUS       DATAVD010001458         2871 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1998991, whole genome shotgun sequence.
ACCESSION   DATAVD010001458 DATAVD010000000
VERSION     DATAVD010001458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2871
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1998991"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..447
                     /locus_tag="VHX39_27945"
     CDS             <1..447
                     /locus_tag="VHX39_27945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HEX3995025.1"
                     /translation="TAAWTGQNCVEWCGSVAGDGISVAGNMLAGEPTIQQTLRTWNTG
                     DDLAMPERLMAAMLAGEAAGGDRRGKQSAAMVMITTEDFPDLNLRVDDHAEPLQELRR
                     LLDIWRVEGTARLGSAPSKANPSGVTDLDAIEAGWIARGLELRLRR"
     gene            complement(472..2280)
                     /locus_tag="VHX39_27950"
     CDS             complement(472..2280)
                     /locus_tag="VHX39_27950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEX3995026.1"
                     /translation="MPPPLLSLQDVHLTFGTTPLLTGAGLSVSAGDRVCLVGRNGSGK
                     STLLRIAGALMDADTGRRYAQPGATIRYLPQEPDFSEFATTLAYVEAGFDDGAAGDRH
                     RAIYLLEQLGLDGSENPALLSGGEARRAALARVLAPEPDILLLDEPTNHLDLPGIEWL
                     ERELSGLRSGIVLISHDRRLLERLSRVTVWLDRGITRQLDAGFAGFEAWRDTVLEQEE
                     LDRHKLGRKIVMEEDWLRYGVTARRKRNQKRLADLHALRKKRKELRGAAGNVKLRAAD
                     AELSGRLVVVAEGVTKAFGDRVVVRDFSTRILRGDRVGIVGPNGAGKTTLLNLLTGSL
                     TPDAGTVTIGTNLAQVSVDQRRDVLDPDRTLTQTLTGGAGDSVTVAGQTRHVIGYMKD
                     FLFAPEQANTPVGVLSGGERARLTLALAFAKPSNLLVLDEPTNDLDLETLELLQELMA
                     DYSGTVLLVSHDRDFIDRVVTSVIATEGDGRWIEYAGGYSDMLAQRGPTKAIAAPVVA
                     RPKAEAPSRVNAKRMTFKDRHALETLPARITGLEAEVAALTAALDDADLYRRNPARFA
                     ETTTSLEATRIALAAAEEQWLELEMQREELEGRRPD"
     gene            complement(2327..>2871)
                     /locus_tag="VHX39_27955"
     CDS             complement(2327..>2871)
                     /locus_tag="VHX39_27955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995027.1"
                     /translation="SKWSCAAKMRRAPRMIWALLAVLIPAAAFAGPAEELSGLFVQTC
                     LPYAGRPQALRQWAMREKLPLVPDPARAAFLNGAPGQVFDASNNAGKFVLVSSDDGIC
                     AVVTDHAGDLETAQALERALTDAGIRFRLVIERDDKLNPKLHHREYLATGSGPGGWRI
                     LAATVHGDPPGQAMLTGAPE"
BASE COUNT          522 a          964 c          882 g          503 t
ORIGIN      
        1 accgccgcct ggaccggcca gaactgtgtg gaatggtgcg gctctgtcgc gggcgacgga
       61 atcagtgtcg ccggcaacat gctggccggc gaaccgacca tccagcagac gttgcgcacc
      121 tggaacaccg gcgacgacct ggcgatgccg gaacgattga tggcagcgat gctggccggc
      181 gaggctgccg gcggcgaccg tcgcggtaag caatccgccg ccatggtgat gatcacgacc
      241 gaagatttcc cggacctcaa tctgcgcgtg gacgatcatg cggaaccatt gcaggaactc
      301 cggcggctgc tggatatctg gcgggtcgag ggtactgcgc gacttggttc ggcgccgtca
      361 aaggcgaacc cgtcgggtgt caccgacctc gacgcgatcg aggccggctg gatcgcgcgc
      421 ggtctggagt tgcggttgcg acgctgattc cgttacgcac ccggccacgg gtcaatctgg
      481 ccgacggcct tccagttcct cgcgctgcat ttccagttcc agccactgtt cttcggccgc
      541 cgccaacgcg atgcgtgtgg cttccagcga cgtcgtcgtt tccgcaaagc gtgcgggatt
      601 acgccggtaa agatccgcgt cgtccaacgc ggcagtcagc gccgcgacct cagcttcaag
      661 cccagtgatg cgggccggta aggtttccag ggcgtggcga tccttgaaag tcatgcgttt
      721 cgcgttaacc cgggacggcg cttcggcttt cggccgcgca actaccggag cggcaatcgc
      781 tttcgtcggc ccacgttgcg ccagcatatc ggaatagccg ccggcgtact cgatccaacg
      841 tccgtctcct tccgtggcga tcaccgaggt caccacgcga tcgataaagt cccgatcatg
      901 cgaaaccaac agcaccgtgc cggaataatc cgccatcagt tcctgcagca gttccaacgt
      961 ttcaagatcg agatcattgg tcggttcgtc cagcaccagc aaattcgacg gtttggcgaa
     1021 tgccaacgcc aatgtcagcc gcgctcgctc gccgcccgac agcacgccca ccggagtgtt
     1081 cgcctgctcc ggtgcaaaca gaaaatcctt catgtaaccg atgacatggc gggtttgtcc
     1141 ggccaccgtt acgctatcgc cggcacctcc ggtcaatgtc tgtgtcaacg tgcgatccgg
     1201 atcgagcaca tcgcgccgtt gatccacgct cacctgagcc agattggtgc cgatcgtcac
     1261 cgttccggca tccggcgtca gcgagccggt cagcagattg agcaatgtgg tctttccggc
     1321 gccatttggg ccgacgatcc cgacacggtc gccgcgcaaa atccgcgtgg aaaaatcccg
     1381 tacgacaacg cggtcgccaa acgctttcgt cacgccctcg gccacgacaa ccagccggcc
     1441 ggacaattcc gcatccgccg ctcgcagttt cacgttgccg gccgcgccac gcagttcttt
     1501 gcgtttcttg cgcaatgcgt gcaaatcggc gagccgcttc tggttgcgtt tgcgccgcgc
     1561 cgtgacgccg taccgcagcc agtcctcctc cataacgatt ttgcggccaa gtttgtggcg
     1621 gtcgagctct tcctgctcca gcacagtgtc tcgccacgcc tcaaatccag cgaagccggc
     1681 gtcgagttgc cgcgtgatcc cgcggtcgag ccagacggtg acacgagaca gccgctccaa
     1741 caggcgccgg tcatggctga tcagcacgat acccgaacga agtccggaca actcccgctc
     1801 cagccactcg atacccggca gatccaggtg gttcgtcggt tcgtccagca gcagaatgtc
     1861 cggctcgggc gccagcacgc gagccagggc agcgcgccgc gcctccccgc cggacagcag
     1921 cgccggattc tcgctgccat cgagcccgag ttgttccagc agatagatcg cccggtgccg
     1981 gtcgccggcg gcaccgtcgt cgaagccggc ctcgacgtaa gccaatgtgg tggcgaactc
     2041 cgaaaaatcc ggttcctgcg gcaaatacct tatcgtcgcc cccggctggg cgtaacggcg
     2101 gccggtgtcg gcatccatca gtgctccggc gatgcgcagc aacgtcgatt tgccggaacc
     2161 gttgcggcca accagacaga cccggtcgcc cgccgatacg ctcaggcctg cgccggtcag
     2221 cagcggcgtg gtgccgaacg tgagatggac atcctgaagc gacagcaagg gcggcggcat
     2281 gatcggctgg ctataccgcg cggcgccgtg gccggaaacc aggtcgtcat tccggcgcgc
     2341 cggtcaacat cgcctggccg ggagggtcgc cgtgcaccgt cgcagccaga atgcgccagc
     2401 cgcccggacc ggagccagtg gcaagatatt cgcgatgatg caatttcgga ttgagtttgt
     2461 cgtcccgctc gatcaccagg cgaaacctga tgccggcatc agttagcgcc cgctccagcg
     2521 cctgcgcggt ttccagatcg cccgcgtggt ccgtcacaac ggcgcaaatg ccgtcatcgg
     2581 atgacaccag cacgaatttc ccggcgttgt tcgacgcatc gaacacctgg cccggagcgc
     2641 cgttcaggaa ggccgcgcga gccgggtcgg gcacaagcgg cagtttttcc cgcatagccc
     2701 attgccgcag agcttgcggc cggccagcgt agggcaggca ggtctgcacg aacaggcctg
     2761 acaattcctc ggcgggtcct gcgaaagcgg ccgcggggat cagcacggca agcaaagccc
     2821 agatcatgcg aggggcgcgt cgcattttag cggcgcaact ccatttcgat c
//
LOCUS       DATAVD010001459         2289 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1811790, whole genome shotgun sequence.
ACCESSION   DATAVD010001459 DATAVD010000000
VERSION     DATAVD010001459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1811790"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2081
                     /locus_tag="VHX39_27960"
     CDS             <1..2081
                     /locus_tag="VHX39_27960"
                     /inference="COORDINATES: protein motif:HMM:NF024516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AsmA-like C-terminal region-containing protein"
                     /protein_id="HEX3995028.1"
                     /translation="IAADTRDWVMQNIQAGTAHDGRADLVLDSPDRQPDVKLVSATGT
                     LEGDGVAVTWMPNAPRVEQAKTHLVLTDPDKLEIDVRTARQVVRTADPIAIPSGHITI
                     TGLSVKDQFAFVQCEADGSIASAIALLKDPAVKVLDRHPLDLRAPSGDARVTIHAMIP
                     LEKNLSIDEVELHATANLTKAHLSGIAAGRDLDDGTLLLDVDTNHLSVKGTGRLAGIQ
                     AAIDGMMDFRSGPPTQVLQRFQATGRVTAQQLSDAGLDTGGALAGEVGLTAVLNEYRN
                     GDGEVTADADLTQAALDIGPLAWRKPVGAAAKASARLLLVKDKLTSIEPITIDGAGLQ
                     VAGAATVADGKPDTVRLERVVLGRTDVKGMIRLPPNGPINVDLIGPSLDVAAKLQEKS
                     PKRDPAAPPPPPGPAWSMRGRFDRVYLAHDQIANDVAAAGDSDGRVVRALAITGKGGA
                     GKLFSFRIGQDPVAPGPGRPVRRLSINAEDAGSFLQGLDVTGAIKGGELSVGGEFDDT
                     TPRHTLSGALEIIDFRVSNAPALGKLLQAVTLYGLVDALGGPGLRFARLTAPFQLDDD
                     TLVLRDARAFSPSLGLTAKGRIDRGEVELQGTVVPAYVFNSVLGRIPLIGGLFSAEKG
                     GGVFAMNYSLRGPMDNPSVAANPLSVLTPGILRGMFGLFERATSESQVAPDIQTPLDR
                     PASGGNAHTQ"
     gene            2094..>2289
                     /locus_tag="VHX39_27965"
     CDS             2094..>2289
                     /locus_tag="VHX39_27965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase type II"
                     /protein_id="HEX3995029.1"
                     /translation="MSRKQPVAIVFDTFGTVVDWRGSLIADLTGFGKQRGIEADWPAL
                     IDAWRASYHPSMDRVRKGELP"
BASE COUNT          405 a          676 c          787 g          421 t
ORIGIN      
        1 atatcgcggc cgacacccgc gattgggtca tgcaaaacat tcaggccggg actgcgcatg
       61 atggccgtgc cgatctggtg ctcgactcgc ctgacaggca gccggacgtg aaactggtca
      121 gcgccaccgg gacgttggaa ggcgacggcg tcgcggtcac ctggatgccc aatgcgccgc
      181 gggtggagca ggccaaaacg catctggtcc tgaccgaccc ggacaaactc gaaatcgatg
      241 tcaggacggc tcgccaggtc gtcagaacgg ccgacccgat tgccattccc tctggccaca
      301 tcaccatcac cgggctctcg gtcaaagatc agtttgcctt tgttcaatgt gaggcggacg
      361 gctcgatcgc cagtgccatc gccctgttga aggatccggc cgtgaaggtt ctcgaccggc
      421 atccactgga cctgcgggcg ccctcgggcg acgcacgcgt gaccattcac gcgatgatcc
      481 cgttggagaa gaacctgtcg atcgacgagg tcgagttgca tgcaacagcc aatctgacca
      541 aggcgcacct gagcgggata gcggccggcc gcgatctgga cgacggcacg ctgctgctcg
      601 acgtggatac caaccatttg tcggtcaaag gcaccggccg gctggcgggc attcaggccg
      661 ccattgacgg gatgatggat tttcgcagtg gcccgccaac ccaggtgctg cagcggtttc
      721 aggcgaccgg tcgggtaacg gcgcagcagc tgtccgacgc cggcctggat actggtggcg
      781 cgctggcagg cgaggtcggg ttaaccgcgg tgttgaacga gtatcgcaat ggcgacggcg
      841 aggtgaccgc ggacgccgat ctcacccagg cggcgttgga tattggaccg ttggcctggc
      901 ggaagccggt gggtgccgcc gccaaggcct ccgcgcggct gctgctggtg aaagacaaat
      961 tgaccagcat cgaaccgatt acgatcgatg gcgcgggact gcaggtcgcg ggcgcggcca
     1021 ccgtagcgga tggcaagccc gataccgtcc ggttggaacg cgtcgttctg ggtcggaccg
     1081 acgtcaaagg gatgatccgg ttgccgccaa acggtccgat caacgtcgac ctgatcggcc
     1141 cgtctttgga tgttgccgcc aaattacagg aaaaatcgcc gaagcgagat cccgcggcgc
     1201 cgccgccacc tcccggaccc gcatggtcga tgcgcggccg gttcgatcgc gtgtacctgg
     1261 cgcatgatca aattgccaac gacgttgcgg ccgcgggcga cagcgacggg cgcgtagtgc
     1321 gggcgctggc gattaccggc aagggcggcg caggaaagct gttttcgttt cgtattgggc
     1381 aggacccggt cgcacccggt cccggccggc cggtacggcg tctgtccatc aatgcggaag
     1441 atgcgggaag cttcttgcag gggttggacg tcaccggagc catcaagggc ggtgaactgt
     1501 cggttggtgg cgagtttgac gatacgacgc cgcgccatac cttgtccggg gcgctcgaga
     1561 tcatcgattt ccgggtcagt aacgctcccg cactcggtaa attgctccag gcagtcacgc
     1621 tctatggcct ggtcgacgca ctgggcggcc caggactgcg gtttgcgagg ttgactgcgc
     1681 cgtttcaact ggatgacgat acgctcgtgt tacgggatgc gcgtgcgttc agcccgtcgc
     1741 ttggtctgac cgcgaagggg cggatcgatc gcggcgaggt tgagctgcag gggacggtgg
     1801 tgccggctta cgtcttcaac tcggtacttg gccgcatccc gctgattggc gggttgttca
     1861 gtgccgaaaa gggtggcggc gtatttgcca tgaattattc gttgcgcggg ccgatggaca
     1921 atccttccgt tgcggcaaac ccgctgagcg tgctgacacc ggggattttg cgcggcatgt
     1981 tcgggctgtt cgaacgcgcc acgtccgaga gccaggttgc acctgatatc cagaccccgc
     2041 ttgaccggcc ggcctcgggc ggcaacgctc acacgcagtg atgggagggt agcatgtcca
     2101 gaaagcagcc ggtggcgatt gtgttcgata cgtttggtac ggtggtggat tggcgcggca
     2161 gtctgatcgc cgatctgacc gggttcggca agcaacgcgg tatcgaggca gactggccgg
     2221 cgctgatcga cgcctggcgg gcctcttacc atccgtcgat ggaccgggtg cgcaagggtg
     2281 agctgccgt
//
LOCUS       DATAVD010001460         1705 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3488009, whole genome shotgun sequence.
ACCESSION   DATAVD010001460 DATAVD010000000
VERSION     DATAVD010001460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3488009"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..407)
                     /locus_tag="VHX39_27970"
     CDS             complement(<1..407)
                     /locus_tag="VHX39_27970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995030.1"
                     /translation="MILTADSTVATEANRRRTGNGWHTTFIGKNRNTLRQGEAPPDAN
                     IVYPMAFLVEKDAAAVVRPHFHAADQYQVIVQGGGRLGTHDVGTVSVHYTDAYSAYGP
                     IVAAGEGISWFTLRKAWDPGARYMPAERAQLREA"
     gene            577..1353
                     /locus_tag="VHX39_27975"
     CDS             577..1353
                     /locus_tag="VHX39_27975"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3995031.1"
                     /translation="MPANPFDLTGKVALITGGNSGIGLGMAKGLAAAGADIAIWGTNA
                     AKNAAAREEIAHAGHRVLALECDVGDEAAVDACFARTVETFGHVDGCFANAGVSGRSG
                     GKPFFEMAAEEWRRVMRVNLDGAFFTLRAASRHMVQNKIEGVLAGTASLAAIEASPRS
                     EHYAATKGGMISMMKSLAVELARYGIRAHSILPGWIDTNMTEKTLASDGFQNKVFPRV
                     PMRRWGTGDDFAGIAVYLMSSASRYHTGDTFVIDGGYSLF"
     gene            complement(1457..>1705)
                     /locus_tag="VHX39_27980"
     CDS             complement(1457..>1705)
                     /locus_tag="VHX39_27980"
                     /inference="COORDINATES: protein motif:HMM:NF012973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHIPEP family type III secretion protein"
                     /protein_id="HEX3995032.1"
                     /translation="SLSGPPEERQLAMAPGKLQEFVRKLNEVYERASSGGELPVVLSS
                     GAIRAHVRAIVERVKPGTAVLSQLEIFPRAKIRTVGTV"
BASE COUNT          296 a          519 c          551 g          339 t
ORIGIN      
        1 gcctcacgca gttgcgcccg ttcggccggc atgtaacgcg cgccgggatc ccaggccttg
       61 cgcaaggtga accaggagat gccttcgccg gccgctacga tcggaccata agcggaataa
      121 gcgtcggtgt agtgcactga caccgtgcca acgtcatggg tgccaaggcg gccgccgccc
      181 tgcacgatga cctgatactg atcggcggcg tggaaatgcg gcctgacgac cgcggctgcg
      241 tctttctcga ccaggaatgc catcgggtaa acgatgttgg catccggcgg cgcttcgcct
      301 tgcctcagcg tgttgcgatt cttgccgata aaggtggtgt gccagccatt gccggtacgc
      361 cggcgattgg cctcggttgc gacggtgctg tccgcggtca ggatcatgaa actgcctcac
      421 gttcgttctt gccgccaacg gtagacgaaa tcgtgccgta ccgccagggg cacgtctggt
      481 ttggctcggt gcgccgcgtt ctctgcggca cctggcctcg cttgccattg cgacagtgcc
      541 gggtgttgat gggtgatcct tgcgacggag aaactcatgc ccgcgaaccc cttcgacctg
      601 accggcaaag tcgccctcat caccggcggt aattccggca tcggactggg catggcgaaa
      661 ggcctggcgg ccgccggagc cgacatcgca atctggggta ccaacgctgc aaagaacgcc
      721 gccgcgcggg aggaaatcgc gcacgccggc caccgcgtgc tggcgttgga atgcgatgtc
      781 ggcgacgagg cggcggtcga cgcctgcttc gcgcgcacag tggagacctt cggccacgtc
      841 gacggttgtt tcgccaatgc cggcgtctcc ggacggtccg gcggcaagcc gttcttcgag
      901 atggcggccg aggaatggcg ccgcgtgatg cgggtcaatc tcgacggcgc gttcttcacg
      961 ttacgggcgg cgtcgaggca catggtgcag aacaaaatcg aaggtgtgct ggccggcaca
     1021 gcgtcgttgg ccgcgatcga ggcctcgccg cgcagcgagc attacgctgc gaccaagggc
     1081 ggcatgattt cgatgatgaa atcgttggcg gtggaactgg cacgctacgg catccgtgcg
     1141 cattcgatcc tgccaggttg gatcgatacc aatatgaccg agaagacgct cgccagcgac
     1201 gggttccaga acaaagtatt tccccgcgtg ccgatgcgcc gttggggcac cggcgatgat
     1261 ttcgccggga ttgcagtata cctgatgagt tccgcatcac ggtatcacac tggcgatacg
     1321 ttcgtcatcg atggcgggta ttcgttgttt tgaggctctc cgtcagcgga atcggacctt
     1381 gcgtgttgag gacgggccat acaggttatt ccctgagtgc cccggttgaa aatcctgcgt
     1441 gcctgagctg gctgccttat accgtaccca ccgttctgat cttggcgcgt gggaaaatct
     1501 ccagttgtga cagcaccgcg gtgccgggtt tgactcgctc gacaatcgcc cggacatggg
     1561 cgcggatcgc accgctgctg agcacaacag gcaattcgcc tccggaggat gctctttcgt
     1621 acacctcgtt cagcttgcgc acgaattcct gcagtttccc cggcgccatc gccagctgtc
     1681 gttcctcagg cggtccggac agtga
//
LOCUS       DATAVD010001461         6712 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3299208, whole genome shotgun sequence.
ACCESSION   DATAVD010001461 DATAVD010000000
VERSION     DATAVD010001461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6712
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3299208"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..683
                     /locus_tag="VHX39_27985"
     CDS             <1..683
                     /locus_tag="VHX39_27985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type II and III secretion system protein family
                     protein"
                     /protein_id="HEX3995033.1"
                     /translation="LDINAVIDAMAQDQLVHVLAEPNLTAMSGETASFLVGGEFPIPV
                     AMQNNQISIDFKQYGVSLAFVPTVIAGGRINMKVRPEVSALTTQGAVQLGIGNSTIQV
                     PALTVRRAETTVELASGQSFAIAGLLQDNTTMTGNALPGLGELPILGALFRSDSFQRN
                     ETELVIVVTPYLVSGVSNPDQLKLPTDGWKPPSDLERLLLLRQSARDPGKVAAVPHIP
                     GDAGFVVQ"
     gene            691..1017
                     /locus_tag="VHX39_27990"
     CDS             691..1017
                     /locus_tag="VHX39_27990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995034.1"
                     /translation="MTRLCPTALVLLVVLAGCAQTDPYRREGVWRPNGANEANLRAMV
                     VVPSDLAIATRASPADGQLAAAALSRLHHDHVRPLPDSGLAQIVPVSNGTAAPPAAAP
                     TPGSGE"
     gene            1017..2276
                     /locus_tag="VHX39_27995"
     CDS             1017..2276
                     /locus_tag="VHX39_27995"
                     /inference="COORDINATES: protein motif:HMM:NF025001.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX3995035.1"
                     /translation="MPPDDAALTEPPIAERERPDRPKVIAFVRDQETETALREGLMEV
                     VPQGFDIHRGTVHVAMAALQNMPTPRVLIVDVSGEDQPLSALGELSDVVEPDVRVLVI
                     GDREDLNFYRQMTHGLGVMEYLYQPLMRDMVARYFGPRIQTGAPTKEAVVGGRIVTVT
                     GARGGTGASTIAANLAWHFGVEARRHTVLLDADLHRGTAAMLLGAKIGPGLRTVLEAP
                     DRIDELFVERAAQPVSKRLHVLAAEEKLGETVTYTQNSAARLLEALRRRYNFVVIDVP
                     WSALPLHRDLLMMANQRVLVMDPTLASVRDGLRLMALPNGPKQPGRGVLVLNRENLPG
                     GLNRRQLDEGLKMSPDVVIPDLPKIVGHAAHMGEPAMEVRGGFRNGILQLAREVAFVR
                     LLDSGTAAAAPTDGKHGRLRRLLGLRS"
     gene            2273..3646
                     /locus_tag="VHX39_28000"
     CDS             2273..3646
                     /locus_tag="VHX39_28000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HEX3995036.1"
                     /translation="MSVTPPIFGRRSSAAEPASPVLELARPVEAAPVQAPDQPAPTTL
                     LRMACLAQLDPAVIANLSPDRVVVEVERLLWEIATARRFQLNAREQHQLAEELVDDML
                     GLGPLEPLLEDDSITDIMVNGPNCVFVERGGKVVQSDIRFRDSAHVANISQRIASAIG
                     RRIDESSPMVDARLKDGSRVNIVFPPLALDGPYISIRKFSRQQIDFAKLVSYGSLTQP
                     VARVLEVAGRCRLNVVISGGTGSGKTTLMNAMSRLIDHGERIITIEDAAELQLQQPHV
                     VRMETRPQSLEGRGEITQRDLIHNALRMRPDRIIVGEVRGSEAFDMLQAMNTGHDGSM
                     STVHANTTRDAVTRIENMVQMGNMGLPARSIRQQFVGAVDLIIQVERHRDGKRRVTQV
                     TDVCGLEGETVILNDVFSYQVEGETIAGGLVGHYRVNRARPSFHQRLTYFGLDRAWTS
                     ALEEAEA"
     gene            3643..4605
                     /locus_tag="VHX39_28005"
     CDS             3643..4605
                     /locus_tag="VHX39_28005"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX3995037.1"
                     /translation="MSPLVSLLVGAVFVSGGIALGISAIMQEQKQRRRYNNRLQLVAA
                     PYMKVNALDEMGRAKAARSMPGMRLIAAAAGLFGYDPAHAEHYSFRWWIVLGAALIPA
                     RAVAEMLSIFAGSWSLLAVPVAWVWFCRFVFHWSEERRRGILYAQFPDALAMIVRAVR
                     VGIPLGEGIHTVAREALPPTGPEFGLLHDRIAIGVTLEDALHEMAGRTGISEYRFFAT
                     ALALQGRTGGGLTEALDGLADVMRRRLALKARGLALAAEAKTSIAILASLPFVAGGAL
                     AVLNPHYIGRLFYEHGCQKVLFTAVGLLVGGLLVMRGMIRKALA"
     gene            4605..5540
                     /locus_tag="VHX39_28010"
     CDS             4605..5540
                     /locus_tag="VHX39_28010"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX3995038.1"
                     /translation="MSAITPWLAPMLVGGFAVVLGLALLLWQDLRRSERLSARLLKAR
                     SGSGTAEPEPGVGLSPLLRVVTAIGETIARSGALSTRTLEELRQTLQVAGFHGDHGLG
                     LFVGTKLLLVVGLPVVLVIAIWVTHFNVPHPTAVVAVAAGVGLLAPDKVVQHLRARYL
                     SAFEAGMPDALDMMVICGQAGLGLEASIERVGIEIRHAHPVVADELTRTAHEMQVNAD
                     TRVALLNLGKRTGLESARRLSAMLVQSMQYGTPMAVALRSLSAEQRQEMLAKYETKAG
                     RLPVLLTLPMIVFILPCVFLVVAGPAVVDVYRAMR"
     gene            5585..6343
                     /locus_tag="VHX39_28015"
     CDS             5585..6343
                     /locus_tag="VHX39_28015"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3995039.1"
                     /translation="MTLTMPGHGWTRRGWFILLLLAGCSTAATSDKKVGIPGVNIADA
                     ALDGGMPDTALNVTRSILQSNPRDVGALERQGDALAQLGQPDAAMEAWRRAVAINPGS
                     PVALLGLGRMQLSRGNAADAEINFTKLLAVTQDDQAALNDLGVALDLQGKHAAAQAVY
                     ARLLSRSPNDHAASVNLALSLSLSGQAGRSVEMLRGPGSQPGAAPRVRQDLAVALALS
                     GDTGGAEKLLLTDLSPSDAAAALAGYRALGITVK"
     gene            6369..>6712
                     /locus_tag="VHX39_28020"
     CDS             6369..>6712
                     /locus_tag="VHX39_28020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995040.1"
                     /translation="MSVRVKRTAAGRLRESRASIALIGAAVIAMLAALGAVAVDLGTA
                     YLAKVADQRAADSTAYAGALAYNVSSSVTTMNAAVSNLAALNGLPVGAASASLVASPS
                     GDGNSAVRVTVTT"
BASE COUNT         1149 a         2107 c         2216 g         1240 t
ORIGIN      
        1 cgctcgacat caacgcagtt attgacgcca tggcccagga ccaactggtc catgtgttgg
       61 cggagccgaa cctgaccgcc atgagcggcg aaactgccag tttcctggtg ggtggcgagt
      121 ttccgatccc ggtcgccatg cagaacaatc agatcagcat cgacttcaag caatacggtg
      181 tgagcctcgc atttgtgccg acggtgatcg ccggcggacg catcaacatg aaggtgcgcc
      241 ccgaggtcag cgcgcttacg acccagggtg ccgtgcagct tggcattggc aacagcacga
      301 tccaggtccc cgcactgacg gtgcggcgcg ccgaaaccac agtcgaactg gcgagtggcc
      361 agagcttcgc cattgccggg ttgctgcagg ataacacgac gatgaccggt aatgcgctgc
      421 ctggtcttgg cgaattgccg atcctgggtg cgctgtttcg ctccgactcg ttccagcgca
      481 acgagaccga gttggtgatt gtcgtcaccc cgtatttggt cagcggcgtg tccaaccccg
      541 atcaactgaa actgcccacc gacgggtgga agccgcccag tgacctggag cgtctgctgt
      601 tgctgcgcca gagcgctcgc gatcccggca aggtcgcggc ggtgccgcac atccccggcg
      661 acgccggttt cgtcgtgcaa tgaggacgcc atgaccagat tgtgcccgac ggctctggtt
      721 ctgctggttg tgctggccgg ttgcgcgcaa accgacccat atcggcgcga aggcgtatgg
      781 cgcccgaatg gcgccaacga ggccaacttg cgtgccatgg tggtggtgcc gtccgatctg
      841 gcaattgcga cccgtgccag ccccgctgac ggtcaactgg cggcggcggc gctatcccgg
      901 ttgcaccatg accatgtgcg tccgttgcca gacagtgggt tggctcagat cgtcccggtc
      961 agtaacggaa cggcggcccc cccggcggcg gcgcccacgc ccgggagcgg tgaataatgc
     1021 cgcccgacga tgccgcactc accgagcctc caattgccga gcgggaacgg cccgaccggc
     1081 ccaaagtcat cgcctttgtt cgcgaccagg agaccgaaac ggcgttgcgc gaaggcctga
     1141 tggaggtcgt gccgcaaggg ttcgacatcc accgcggcac cgtgcacgtg gcaatggctg
     1201 cgctgcaaaa catgcccaca ccgcgggtgc tgatcgtcga tgtcagcggc gaggaccagc
     1261 cgctgtcggc cttgggcgaa ttgtccgacg tcgtcgaacc ggacgtccgc gtgctggtca
     1321 tcggcgatcg cgaggacctc aacttctacc gccagatgac ccatggcctg ggcgtgatgg
     1381 aatatctcta tcagccgctg atgcgcgaca tggtggcgcg ctatttcggc ccgcggatcc
     1441 aaaccggagc accaacaaag gaagccgtgg taggcggccg tatcgtcact gtgaccggcg
     1501 ctcgaggcgg caccggggcc agcaccatcg ctgccaatct ggcatggcat ttcggcgtcg
     1561 aagcgcgccg ccacacggtt ttgctggatg ccgacctgca ccgaggcacc gccgcgatgc
     1621 tgcttggcgc caaaatcggg cccggcctgc gcaccgtgct tgaggcaccg gaccgcatcg
     1681 acgaattgtt tgtcgagcgt gccgcgcagc cggtcagcaa gcggctgcat gttctggccg
     1741 ccgaagagaa gctcggcgaa acggtcactt acacccagaa ctcagctgcg cggctgctgg
     1801 aggcactgcg gcggcgctac aattttgttg tcatcgacgt tccctggtcg gcgctgccgc
     1861 tgcatcgcga tctgctgatg atggccaatc agcgcgtgct ggtgatggat ccaacgctcg
     1921 cttcggtgcg ggatgggctg cgtctgatgg cgctgccgaa cggcccaaaa cagccgggcc
     1981 gcggcgtgct ggtgctgaat cgcgaaaacc tccccggtgg cctgaaccgg cgccagctgg
     2041 acgaagggct gaagatgtcg ccggacgtcg tcatccccga cctgcccaaa attgttggtc
     2101 acgcggcgca tatgggcgag ccggcgatgg aggtgcgcgg cggatttcgc aacgggatcc
     2161 tgcagttggc gcgcgaggtc gcgtttgtcc ggctgctcga cagtggaacc gcggcggcgg
     2221 cgccaaccga cggcaaacac ggccgtttgc gccgcctgct gggcctgaga tcatgagcgt
     2281 cacgccgccc attttcggtc ggcgcagcag cgcggcggag ccggcgtcgc cggtgctgga
     2341 actcgcgcgg ccggtcgaag cagcgccggt ccaggcgccg gaccagcctg cgccaacgac
     2401 cttgctcagg atggcgtgcc tggcgcagct cgaccctgcg gtcatcgcca acctctcgcc
     2461 cgaccgcgtc gtggtcgaag ttgagcgcct gttgtgggag atcgcgaccg cccgccgttt
     2521 ccagctgaac gcgcgcgagc aacaccaact cgctgaggaa ctggtcgacg acatgctcgg
     2581 cctcggtccg ctcgagcctc tgctcgagga cgacagcatc accgacatca tggtgaatgg
     2641 accgaactgc gtcttcgtcg agcgcggcgg caaggtggtc caatcggaca tccgtttccg
     2701 ggattccgcc catgtcgcca acatctccca gcgcatcgca tcggcgattg gccgtcgtat
     2761 cgacgagtcg agcccgatgg tggatgcgcg gctgaaagac ggctcgcgcg tcaacatcgt
     2821 gtttccgccg ttggcgctcg acggaccgta tatttcgatc cgcaaattct cccgtcagca
     2881 gatcgatttt gcaaaattgg tgagttacgg ctcacttacg cagccggttg cccgcgtgct
     2941 ggaagtggcg ggacgatgcc ggctgaacgt tgtcatctcg ggtggcaccg ggtccggcaa
     3001 gaccacgctg atgaacgcca tgtcgcggct gatcgaccat ggtgagcgca tcattacgat
     3061 tgaggacgcg gccgagttgc aactgcaaca gccgcacgtg gtgcgcatgg aaacccgccc
     3121 gcaaagtctt gagggtcgcg gcgagatcac tcagcgcgac cttatccata acgcgctacg
     3181 catgcgtcct gaccgcatca ttgtcggcga ggtgcgcggg tcggaagcgt ttgacatgct
     3241 gcaggccatg aacaccggcc atgacggcag catgtccacc gtccacgcca acacgacccg
     3301 agacgcagtc acccgcatcg agaacatggt gcagatgggc aatatgggac tgcccgcgcg
     3361 ctccatccgt cagcagttcg tcggcgcggt cgatctgatt attcaggtgg aacgccatcg
     3421 cgacggcaaa cgccgggtaa cgcaggtgac ggatgtgtgt ggcctggaag gcgagaccgt
     3481 catcctcaac gacgtcttct cctatcaggt cgaaggcgaa accatcgccg gcggtctggt
     3541 cggccattat cgggtcaatc gcgccagacc aagtttccat caacgtctga cctattttgg
     3601 gctcgaccgc gcctggacca gcgcgctgga agaggcagag gcatgagccc gctggtatcg
     3661 ttgttggtcg gcgcggtctt cgtctcgggc ggcattgcgc ttggcatatc ggccatcatg
     3721 caggaacaga aacaacgacg gcggtacaac aaccggctgc aactggttgc cgcgccctac
     3781 atgaaggtca atgcgctcga cgagatgggc cgtgcgaagg ccgcccgatc gatgccgggg
     3841 atgcggctca tcgctgcggc cgccggcctg tttggctacg atccggccca tgccgaacat
     3901 tattcattcc gttggtggat cgtactcggt gccgcgctga tcccggcccg tgcggtcgcc
     3961 gaaatgttga gtatcttcgc cggaagctgg tcgttgcttg ccgtcccggt ggcgtgggtc
     4021 tggttctgcc gtttcgtctt ccattggagc gaggaacgcc ggcgcggtat cctgtacgcc
     4081 cagttccctg acgcgttggc gatgatcgtg cgtgctgtgc gggtcggcat tcccttgggc
     4141 gaggggatcc acacagtggc gcgcgaagcg ttgccgccaa ccggacctga atttggattg
     4201 ttacacgacc gcatcgcaat cggcgtgaca ctcgaggacg ctctgcacga gatggctggg
     4261 cgtaccggca tctcggagta ccgctttttc gccaccgccc tcgcattgca gggacgcacc
     4321 ggcggtggtc tgaccgaagc gctggatggg ctcgcagatg tgatgcgccg gcgccttgca
     4381 ctaaaggcgc gcggcctcgc gctggcggct gaggcgaaga cgtcgatcgc tatccttgcc
     4441 tcgctgccgt ttgttgccgg tggggcgctg gcggtgctca acccgcacta tatcggccgt
     4501 ctgttctacg agcacggatg tcaaaaagtg ctgttcaccg cggtgggtct gctggtgggc
     4561 gggctcctgg tgatgcgtgg catgattcgc aaggcattgg cgtgatgtcg gcgatcaccc
     4621 cctggctggc acccatgttg gtcggtggtt tcgccgtggt gctcggactt gcgctgctgc
     4681 tctggcagga tctgcgccgt tccgagcgcc tctcggcgcg gcttctgaag gcgcgcagcg
     4741 gtagtggaac tgccgaaccc gaacccggcg tcggattgtc gccattgctg cgggtcgtca
     4801 ccgcgatcgg agaaacgatc gcgcgcagcg gcgccctgtc cacccgtacc ctggaagagc
     4861 tgcgccaaac gctgcaggtg gcgggcttcc acggcgacca cggcctcggg ctatttgtcg
     4921 ggaccaagct actgttggtc gtcggcctgc cagtggtcct ggtgatcgcg atttgggtaa
     4981 cgcacttcaa cgtgccgcat ccgactgcgg tggtggccgt agcagccggc gtcggcctgc
     5041 tggccccgga caaggtcgtg cagcatctgc gcgctcgcta tctgagtgcg ttcgaggccg
     5101 gcatgccgga tgcgctcgac atgatggtga tttgtggcca ggccggtctg ggcctggaag
     5161 ccagcatcga acgggtcggt atcgagatcc gtcacgctca ccccgtagtg gcggacgaac
     5221 tcacccgcac tgcacatgaa atgcaggtca acgccgatac cagggttgcc ctgctgaacc
     5281 ttggcaaacg tactggattg gagagcgcgc ggcggctttc cgcaatgctg gttcagtcca
     5341 tgcaatacgg cacgccgatg gccgtggcgc tgcgctcact ctcagccgag cagcgccagg
     5401 agatgctggc aaaatacgaa accaaagccg gccgtctgcc ggtgctgctt acgctgccaa
     5461 tgatcgtgtt cattctgccc tgtgtgttcc tggtggttgc tggaccggcc gtggtcgacg
     5521 tgtaccgggc aatgcgatga ccatccaccc ggtcccggac ccatcccaaa aaggtgatgc
     5581 atcaatgacc ctgacaatgc cgggccatgg ctggacgcgt cgcggctggt tcattctgct
     5641 gctgctcgcc ggctgttcca ctgctgccac gtccgacaag aaagtcggca taccaggagt
     5701 gaatatcgct gacgcagccc tggacggcgg catgccggat accgcgctga atgtgacccg
     5761 ctcgatcctg cagtccaatc cgcgtgacgt cggcgcgctg gagcgacagg gcgacgcgct
     5821 ggcgcaattg ggccaacccg acgctgccat ggaagcctgg cggcgcgcag tggcgatcaa
     5881 tcctggctcg cccgtggcat tgctgggtct ggggcggatg caactgtcgc gcggcaacgc
     5941 tgcggatgcc gagatcaatt tcacgaagct gctcgctgtc acacaagacg atcaggcggc
     6001 gctgaacgac ctgggcgtgg cgctcgatct gcaagggaag cacgcagcgg cgcaggcggt
     6061 ttacgccaga ctcctgagcc ggagcccgaa cgatcatgcg gcttcggtca atttggcact
     6121 atcgctttcg cttagcggcc aggccggccg gtcggtcgag atgttgcgcg ggcccgggtc
     6181 gcagcccggt gcggcgccgc gtgtccgcca ggatctcgcg gtggcgctgg ccctgtccgg
     6241 cgacacggga ggggcagaaa aactgctgct cacggatctt tcaccctcgg atgctgctgc
     6301 agcgctggct ggttatcggg cgctcggcat aaccgtcaaa tgatggaggc agacatggag
     6361 tgcgaacctt gtcggtccgc gtgaaacgga ctgccgccgg gcggctgcgc gaaagccgtg
     6421 ccagcatcgc gttgattggc gctgcggtca tcgccatgct ggccgcactt ggagcggtcg
     6481 cggtcgatct tggcaccgct tatctcgcca aagtggctga tcagcgggca gccgacagca
     6541 cggcctatgc cggagcgctg gcctacaacg tcagcagttc cgttaccaca atgaacgcgg
     6601 cggtcagcaa tctcgccgcg ctgaacgggt tgccggttgg agcggccagc gcttcgctgg
     6661 ttgcgtcacc cagtggcgat ggcaacagtg cggtccgggt cacggtgacc ac
//
LOCUS       DATAVD010001462         2345 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1812093, whole genome shotgun sequence.
ACCESSION   DATAVD010001462 DATAVD010000000
VERSION     DATAVD010001462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1812093"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..396)
                     /locus_tag="VHX39_28025"
     CDS             complement(106..396)
                     /locus_tag="VHX39_28025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995041.1"
                     /translation="MSSDHERQASETGLVSVPRVLRPPSVRAEAAVAIVTTAMGVLAL
                     GVIAVGAISVGRLAIGRVAIGQARLRGGQIDELRIARLTIQELRVERGPEKL"
     gene            597..2192
                     /locus_tag="VHX39_28030"
     CDS             597..2192
                     /locus_tag="VHX39_28030"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3995042.1"
                     /translation="MVRSFVACVATLMALAMPASASDTPKHGGILTFMIPADSPPSFD
                     GHREATFATIHAVAPFYSVLIRANPDNPSDTTTFVCDVCTAMPVPTDDGRTYSFTIRD
                     DVRFSDGSALTAADVAASWNEIIDPPEGVISARQGYYSMIDKIEAPDAKTVVFHLKFA
                     TGAFLPALADPYAFIYEKKIIDRDPHWYETHILGSGPFLFKEYQSGQSISGERNPNYY
                     RPGLPYLDGFTGIFADKQAVRVAAIKSDRAAIEFRGFPPATRDELVAALGDQIAVQES
                     DWNCGAMITLNHARKPFDDVRVRRALTLAIDRWHGAPALSRITVERTVGGVVFPGSPL
                     AATKAELEQLAGYWPDIDASRTEAKRLLKEAGAEGLSFELVNRNVDQPYKFNGIWAID
                     EWSKIGVHVTQRVLSTGPYDEALRQHDFAATLDAECQNIVNPLLDGTKYLPHSVSSSN
                     YGNYDDPAEIEIYDQMLREPDFAKQRALMRDFEKLVLDTQAHEIFLLWRYRIVPYRSY
                     VKGFKISPSHYVNQDLAGIWLDK"
     gene            2208..>2345
                     /locus_tag="VHX39_28035"
     CDS             2208..>2345
                     /locus_tag="VHX39_28035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HEX3995043.1"
                     /translation="MQTYDYIVVGAGSAGAVVANRLSADARNRVLLLEAGPESHPWSR
                     IP"
BASE COUNT          457 a          764 c          706 g          418 t
ORIGIN      
        1 catcgtaaat acagcttacg tccggggagt tggcatcgat cctcccgcag ttcgccaacc
       61 atcatcggga atggccggca cccgaagccc agaggccatg gcgaactaca gcttctccgg
      121 cccgcgctcg acccgcaact cctgaatggt cagccgcgca attcgcaact catcgatctg
      181 accgcctcgc agccttgcct gcccgatagc aacgcgcccg atcgccaaac ggccgacgga
      241 gatcgcgccc acagcgatca cgcccaaagc aagcacgccc atcgcagtcg tgacgatggc
      301 gactgctgcc tcggcccgta ccgacggtgg ccggagcacc cgtggcaccg agaccaggcc
      361 ggtttcgctg gcctgtcgtt cgtggtcact gctcatagtc tgctcctgcc aattgccggc
      421 gcgattctgg cgcagattgg agaacccgtt gggccagtgg gagttccatg gccaaagcga
      481 caccagagcc ccctcggcgg accggagtta tctttcgcaa ccgccctgag gtaaaaccgc
      541 gatgacaccg ccgcgattgg gggtgcgtgc cggtcagggc caagggggaa acagcaatgg
      601 ttcgatcgtt cgtggcctgt gtggcaacgc ttatggctct ggccatgccg gcgtcggcca
      661 gcgacacgcc gaagcacggc ggcatcctga ccttcatgat ccccgcagac tcgccgccca
      721 gttttgatgg gcaccgtgag gcgacgtttg cgacgatcca tgcggtagcg ccgttctaca
      781 gcgtgctgat ccgcgccaac ccggacaacc cctccgatac caccacgttc gtctgcgatg
      841 tctgcacggc gatgccggtc ccgaccgacg acggccgcac ctatagcttc acgatccgcg
      901 acgacgtcag gttctccgac ggctccgcgc tgaccgccgc cgacgtggca gcaagctgga
      961 acgagatcat cgacccgccg gaaggcgtca tcagtgcacg tcagggctat tattcgatga
     1021 tcgacaagat tgaggcaccc gacgcgaaaa ccgtcgtctt ccacctgaaa ttcgccaccg
     1081 gagcgttttt gccggcgctc gccgatccat atgcgttcat ttacgagaaa aagatcatcg
     1141 accgcgatcc gcactggtac gagacccaca tcctgggctc cggcccgttc ctgttcaaag
     1201 agtaccagtc cggacagtcg atctccggcg agcgcaatcc gaattattac cggccggggt
     1261 tgccttacct ggacggcttc accggcatat tcgccgacaa acaggcggtc cgggtcgccg
     1321 caatcaagtc cgaccgcgcg gcgatcgaat tccgcggctt cccgccggcc acccgtgacg
     1381 aactggtcgc tgctctgggc gatcagatcg ccgtgcagga aagcgactgg aattgcggcg
     1441 ccatgatcac cctgaaccat gcgcgcaagc cgttcgatga cgtcagggtc cgccgtgccc
     1501 tgacattggc gatcgaccgc tggcacggcg cgccggctct gtcgcggatc accgtcgagc
     1561 ggacggtcgg cggggtggtg ttccccggct cgccgttggc cgcgaccaag gcggaactgg
     1621 agcaactggc cggctattgg ccggacatcg acgcctcgcg gaccgaggcg aagcggctcc
     1681 tgaaggaagc cggtgcggaa gggctgagtt tcgaactggt caaccgcaac gtggaccagc
     1741 cgtataagtt caacggcatc tgggcgatcg acgaatggag caagatcggc gtccatgtca
     1801 cccagcgcgt gttgtcgacc ggcccttatg acgaggcact gcgccaacat gacttcgccg
     1861 cgaccttgga tgccgagtgc cagaacatcg tcaatccgct gctggatggc acgaagtacc
     1921 tgccgcactc ggtttcctcg tcgaactacg gcaattacga cgacccggcg gaaatcgaga
     1981 tttatgacca gatgctgcgg gagccggatt ttgcgaagca acgcgcgctg atgcgggatt
     2041 tcgagaaact cgtgctcgac actcaggcgc acgaaatctt tctgctgtgg cgctatcgca
     2101 tcgtgccgta tcgcagctac gtcaaaggct tcaaaatcag cccgagccat tacgtcaatc
     2161 aggatctggc ggggatctgg ctggataaat agtggggttc gggaaacatg caaacctacg
     2221 actacatcgt tgtcggcgcc ggttcggccg gagcggtcgt tgccaaccgg ctttcagccg
     2281 atgcgcgcaa ccgcgtcctg ctgttggagg ccggcccgga aagccatccc tggtcgcgga
     2341 ttccg
//
LOCUS       DATAVD010001463         3771 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1067856, whole genome shotgun sequence.
ACCESSION   DATAVD010001463 DATAVD010000000
VERSION     DATAVD010001463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3771
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1067856"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..783)
                     /locus_tag="VHX39_28040"
     CDS             complement(<1..783)
                     /locus_tag="VHX39_28040"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3995044.1"
                     /translation="MADHQTLPRPLVQGSSAWIGADIAQRPGEWTYQLSEADLAEIAA
                     ATKACTGRDIASITSADFPLPGLGPVLQRMRDELIHGRGFVLLRGLPVEGRPIAESAT
                     AYWGIGTHIGSARSQNAKGHVLGHVRDLGLATDDPNVRTYQTTERQHFHTDSCDVVGL
                     LCLKTAKSGGLSSLVSSNTIYNVMAERYPDLVWRLFQPFATDRRGEVPEGKNPWFDMP
                     VFNDYQGYLSAIYSGTYIRSAARFPDARQPTEEDFAALECFDD"
     gene            1004..1555
                     /locus_tag="VHX39_28045"
     CDS             1004..1555
                     /locus_tag="VHX39_28045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HEX3995045.1"
                     /translation="MAVSTRRDLLAIFGGGVLMAAAKPPLAWDFSFPSIDGGTLDFRT
                     FAGHVLLVVNTASFCGYTYQYEGLRKLYDAKSADGLTVIGVPSQDFNQESPDNKTVKT
                     FCETQYSIDFPLSGVSHVKGPSAAPFYAWVRTTASWEPSWNFNKVLIARDGSIAGTFG
                     SGDEPSGGKLGSAITAALAQTAS"
     gene            complement(1582..3081)
                     /locus_tag="VHX39_28050"
     CDS             complement(1582..3081)
                     /locus_tag="VHX39_28050"
                     /EC_number="3.4.17.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004181 - metallocarboxypeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase M32"
                     /protein_id="HEX3995046.1"
                     /translation="MKESYAYNRLLKRFERIATITECASVLGWDASVMMPQGGGAARG
                     DQLAVLAGMGHAMITAPETADDLAAAESLPADPDPWANANLRLMRHAHKRSTAVPADL
                     VEAQARANSKCEKIWREAKADADFSKVRSALTEVLNLVRQQATALGEALGMGPYDALM
                     DGYQRGIGSSDVASIFGAYENFLADALPQAEARQARKEAPIKPTGPFPIDLQEKLCRR
                     VAARIGLDFDHARLDRSAHPFSGGIPSDVRITTRYDPADFTQAIMAVIHETGHAMYER
                     GLPGSYARQPVGEAAGMGIHESQSLVVEMIACRNDEYIDWLGRALHQAFGGDPKPYEV
                     ENLGRLWRRVERGLIRVEADEMTYPAHVIMRFRLERAMVSGNLAVADLPGAWNASIKD
                     LMGITPPNDAVGCLQDIHWYDGAFGYFPCYTLGAMAAAQFMAVVLQQTQGLKTAMGLG
                     DLSPLMNWLHANVHSHASVMGFNELLTAATGKKLDPSDFTAHLRARYLS"
     gene            complement(3078..>3771)
                     /locus_tag="VHX39_28055"
     CDS             complement(3078..>3771)
                     /locus_tag="VHX39_28055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SURF1 family protein"
                     /protein_id="HEX3995047.1"
                     /translation="PATMTVVMLLVLLGLGSWQVKRLFWKQALLAQIAQSEVAEPVPL
                     ARIEARGTPSPFMKISATGTFLPDETALYGAEVRDVASGPAMGAQLIEPMREVNGELI
                     LVDRGWVPLSRTGPLDQPTGEVTVSGYVRLGDTQHWFSAADDPPARRFFTLDPHAIGA
                     AIGQPDIRPFVLVALGAGSGADAIVQRWPDPARHLPQPPNNHLSYAITWYGLAVALLT
                     IFTIWARKGSRA"
BASE COUNT          748 a         1218 c         1151 g          654 t
ORIGIN      
        1 atcgtcgaag cattccagcg cagcgaaatc ctcttcggtc ggttgccgcg cgtcggggaa
       61 tctggcggcg gaacgaatat aggtgccgga ataaattgcc gaaagataac cctgataatc
      121 gttgaacacc ggcatatcga accagggatt tttgccctcg ggaacctcgc cgcggcgatc
      181 ggtggcgaat ggttggaaca gccgccagac cagatcagga tagcgctcgg ccatcacgtt
      241 atagatcgtg ttcgacgaca ccagcgacga caggccgccc gacttcgcgg tcttcaaaca
      301 caacagccca acgacatcgc aggaatcggt gtggaagtgc tgccgttcgg ttgtctgata
      361 agtgcggaca ttcggatcgt ccgtcgccag gcccagatcg cggacatgac cgagcacgtg
      421 gcccttggca ttctgcgacc gcgccgaacc gatatgagtg ccaatccccc agtaggctgt
      481 ggcactctcc gcaatcggcc gcccttcaac cggcagaccg cgcaacagca cgaagccgcg
      541 gccgtggatc agttcatcgc gcatgcgctg cagcaccgga ccgaggcccg gcagcgggaa
      601 atccgcgctg gtgatcgagg caatgtcgcg gccagtacag gccttcgtcg ccgccgcaat
      661 ctcggcgagg tcggcttccg acaactgata agtccactcc cccggccgtt gggcgatgtc
      721 cgcacctatc caggccgacg agccctgtac caaaggacgt gggagtgttt ggtggtctgc
      781 catgcttgcg agtatccaag gttgcgagag tgcctgtcgc tattgtgcac gacatggcac
      841 cctgtgccaa acgtgtcgaa agcatcggca ggctaaggtc gcgaaaatgc gcacggcgtt
      901 cggcgcaccg atcggcgatg atgccgccaa cgcaatcgtt gcctgtctga cggcgaactt
      961 cagcgtcccg gcgaaatgac cagcaggttg agggaaacac cggatggcgg tatcaacacg
     1021 gcgagacctg ctggcaatct tcggaggagg tgtgctgatg gccgccgcaa aacccccact
     1081 ggcctgggac ttcagctttc cctcgatcga cgggggaact ctggactttc gcacattcgc
     1141 cggccatgtc ctgctcgtgg tcaataccgc gagcttctgc gggtacacct accagtacga
     1201 agggctgcgc aagctgtacg acgcgaagtc agcggatgga ttgacagtga tcggcgtgcc
     1261 aagccaggac ttcaaccagg aaagtcccga caacaagacg gtcaagacct tctgtgagac
     1321 ccagtacagc atcgacttcc cgttgtccgg cgtttcgcac gtcaaaggcc catccgccgc
     1381 gccgttctac gcctgggttc ggaccacggc gtcctgggag ccgagctgga atttcaacaa
     1441 agtgctgatc gcgcgcgacg gcagcatcgc cggcaccttc ggctccggcg acgagccgtc
     1501 cggcggcaaa ctcggctcgg cgatcactgc ggcgctcgcc caaacagcga gctagaccag
     1561 cggggcctcc gcacgcactc gctacgacaa atagcgcgcc cgcaaatgtg cggtgaagtc
     1621 cgacggatcc aacttcttcc cggtcgccgc cgtcagcaac tcattgaaac ccatgacgct
     1681 ggcatgggaa tgcacgttgg cgtgcaacca gttcatcagc ggcgacagat caccgaggcc
     1741 cattgccgtc ttcagcccct gggtttgctg cagcacgacc gccatgaact gcgccgcggc
     1801 catcgcaccc agtgtgtagc aagggaaata accgaaggcg ccgtcatacc agtgaatgtc
     1861 ctgcaaacag ccgaccgcgt cattgggcgg cgtgatcccc atcagatcct tgatcgaggc
     1921 attccacgca cccggcagat cggcgaccgc caaattgccg gacaccatgg cgcgctccag
     1981 gcgaaaccgc atgatgacgt gcgccggata ggtcatttca tcggcctcaa cgcggatcag
     2041 gccacgctcg acgcgccgcc acagccggcc gagattctcc acctcgtacg gtttgggatc
     2101 gccgccaaac gcctggtgca gcgcgcggcc gagccagtcg atgtattcgt cattccggca
     2161 ggcgatcatt tcgacgacca gcgattgact ttcgtgaatt cccatgccgg ccgcctcgcc
     2221 gaccggctgg cgagcgtagc tgccaggcaa gccgcgttcg tacatcgcat gaccggtctc
     2281 atggatcacc gccatgatcg cctgggtgaa atcggccggg tcatagcgcg tggtgatccg
     2341 cacatccgac ggaattccgc cggaaaacgg gtgcgccgaa cggtccagcc gggcgtggtc
     2401 gaaatcgaga ccgatgcggg cggcgacccg gcggcacaac ttctcctgca ggtcgatcgg
     2461 gaacgggcct gtgggcttga tcggtgcttc cttgcgcgcc tgacgcgcct ccgcctgggg
     2521 tagcgcgtct gccaggaaat tctcgtacgc cccgaagatc gaggcgacat cggatgatcc
     2581 gatcccgcgt tggtagccat ccatcagcgc atcgtacggg cccatgccaa gtgcctcgcc
     2641 aagtgcagtc gcctgctggc gaaccaggtt caggacctcg gtgagcgcgg accggacctt
     2701 gctgaaatcc gcgtcggcct tcgcctcgcg ccagatcttc tcgcatttgg agttggcgcg
     2761 ggcctgggcc tcgacaagat cggctggtac ggccgtcgac cttttatggg catggcgcat
     2821 caggcggaga ttggcgttgg cccagggatc gggatcggcg ggaagggatt cggccgcggc
     2881 gagatcgtcg gcggtttccg gcgcggtgat catggcgtgc cccatgcccg ccaacaccgc
     2941 caactgatcg ccacgggccg caccgccgcc ttgcggcatc atcaccgagg catcccagcc
     3001 aagcaccgac gcgcattcgg tgatcgtagc gattcgctcg aagcgcttga gcaagcggtt
     3061 gtaagcgtag gattccttca tgcgcgcgat ccctttcgag cccagatcgt gaatatcgtc
     3121 agcagcgcga ccgccagtcc ataccatgtg atcgcgtacg acagatgatt atttggcggc
     3181 tgcggcaggt gccgcgccgg atccggccaa cgctgcacga tggcatcggc gccgctgcct
     3241 gcgccaagcg ccaccagcac gaagggccta atatccggct ggccgatggc agcaccgatg
     3301 gcgtgcggat cgagcgtgaa gaaccgccgc gccgggggat catcagcggc actgaaccaa
     3361 tgctgagtgt cacccaggcg aacatatccg gacaccgtca cctctcccgt tggttgatcg
     3421 agcggcccgg tacgggaaag cggaacccag ccgcggtcga ccaggatcag ttcaccgttg
     3481 acctcacgca tgggctcgat caattgcgca cccatggcgg gacctgaggc gacatctcgc
     3541 acctccgccc catacaacgc cgtttcatcg ggcaagaatg tgcccgtcgc agagattttc
     3601 atgaatggcg acggcgttcc ccgggcttcg attcgcgcca gcgggaccgg ttctgccacc
     3661 tcggactgag caatctgggc caacagagcc tgcttccaga acagccgttt gacctgccag
     3721 gagcccagac ctagcagcac caacagcatc acaacggtca tggtagcggg c
//
LOCUS       DATAVD010001464         3265 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1813351, whole genome shotgun sequence.
ACCESSION   DATAVD010001464 DATAVD010000000
VERSION     DATAVD010001464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3265
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1813351"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..785)
                     /locus_tag="VHX39_28060"
     CDS             complement(<1..785)
                     /locus_tag="VHX39_28060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995048.1"
                     /translation="MSNGLTSLLTDRKISTRIGLGFACVLAVLLVVSGITWYAFRSSA
                     AGVANYAARVAVVGAARDIDRSFVNLRRFVREYALSGVEINVDAAKQEQTILRDRLRQ
                     GLDITRNPERRHALEDISRAVDSYFAEFDKVVASTRRLTDLERSGLDGVGGVQQRTFD
                     ALRDAVKIAAGPDPTGPNSSGNAPGDAGVAANEHPAAAAGDVAGLAARGFDQLMVARL
                     DVNKFLGRHDLAAATGAETTFAALGTTLQALDGATKDAAYRKTV"
     gene            complement(1972..2571)
                     /locus_tag="VHX39_28065"
     CDS             complement(1972..2571)
                     /locus_tag="VHX39_28065"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016738430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009146 - purine nucleoside triphosphate
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase"
                     /protein_id="HEX3995049.1"
                     /translation="MGRKILPGSKLVLASHNQGKLAELTELLRPYKVEIVSAGALGLP
                     EPEETAPDFAGNAQLKALAAATATGLPAFSDDSGFCAAALDGAPGPLSARWAGPEKDF
                     AKAMAQVHERAGDAADKRAWFVAALCVAWPDGRTETYVGRVNGTMVWPPRGTHGFGYD
                     PMFLPEGGSETFGEMAPDAKHCVSHRARAFAQVMKSCFE"
     gene            complement(2571..>3265)
                     /gene="rph"
                     /locus_tag="VHX39_28070"
     CDS             complement(2571..>3265)
                     /gene="rph"
                     /locus_tag="VHX39_28070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEX3995050.1"
                     /translation="DALRDISLTTGFSRHAEGSCLIRMGRTEVLCVASVETRVPPFLR
                     NSGLGWVTAEYGMLPRATHTRGDREAARGKQSGRTQEIQRLIGRSLRAVVDRKAMGEM
                     SITLDCDVLNADGGTRCASITGAWVALALAFRHLVTMNVLKTMPLTGQVAAVSCGIVG
                     GEPVLDLNYDEDSTADADANFVLTDAGGLVEIQATAEKNSFSEAEFSSLLRLARSGTA
                     ALFTAQRKAMGD"
BASE COUNT          625 a          954 c         1032 g          654 t
ORIGIN      
        1 acggtcttac ggtacgcggc gtccttggtt gccccgtcca gtgcctgcag ggttgtgccg
       61 agagcggcga acgtcgtctc agcaccggtg gctgcagcca aatcgtgccg gcccaggaat
      121 ttgttgacat cgagacgggc aaccatgagc tggtcgaacc cccgggcggc gagccctgcc
      181 acatcgccgg cagcggctgc cggatgctcg ttggctgcca cgccggcatc gcctggagca
      241 tttccgctgg agtttggtcc ggtggggtct ggtccagcgg ctattttgac cgcatcgcgc
      301 aacgcgtcga aggtcctttg ctgcacaccg cccacgccat cgaggccgct tcgctccagg
      361 tcggtcagcc ggcgtgtcga agccacgacc ttgtcgaatt ctgcgaaata gctgtcgacg
      421 gcacgcgaaa tatcctcaag cgcatggcgc cgttccgggt tccgggtgat atcgaggcct
      481 tgccgcagcc ggtcacgaag gatcgtctgt tcctgttttg ctgcatcgac gttgatttcg
      541 acaccggaga gagcgtattc ccggacgaaa cggcgaagat ttacgaaact gcgatcgata
      601 tcgcgggcgg cgccgacgac ggcgactcgt gccgcatagt ttgcaacgcc cgcggcggac
      661 gaccggaacg cgtaccatgt gatgccggag accacgagga ggaccgccag cacgcaggca
      721 aatccgaggc caatcctggt gctgatcttg cgatcggtca gcagcgaggt aagtccgttg
      781 ctcatacgca gatcccttgg ttgcgggtca tggtgaccgg aacagcaaat gccggccgtg
      841 gggtttggct ccggcgagcg gttatgacga acggatgcga caggaccgga ctggccatga
      901 tcggcacggc ggaagcttca cacatcaacg gttaaaattg gctgaacggc ggcgcgtcga
      961 ctctcagtcg ggcacgtcgc ggcatgtggc gattaaccgg cgcgcatcga cggcccacac
     1021 gatcgtgtgg ataaatttaa ggcgctgcca aaattcgccg tctgatagca actgacagaa
     1081 cgattgattc ggaggtgccg gtctccatcg gtcatgtcct ggcgatctat tgaggcaggt
     1141 gccgatcaca gcagccgggt ggctgcctaa gccctatctg tggttatctt tgttgtcgtt
     1201 taccgttacg gcccggcagg cccgttgatc ttctccgtta ctctgtgcct cggtacctct
     1261 gatataaaat cttacggcgc tggtgccggc atcgccgctg acattggtcg cacattctta
     1321 agcccccatc cgcatatgcg cccaatttta attcagagat acggagggtg ccgctattca
     1381 cccaatggca acgtccaggg acgacgtagc cctcgagagg gatgaagatc gttttgcgga
     1441 tgccgatcct taacaggttt gtcacatata cagggcgaaa gacacttatt cttatcatca
     1501 tatatatgcg aatatgcaca gacgctcgaa cgacctggct ggttcggttg gcattcgacg
     1561 gcattgacat ggagagatgc gtgaaaaaaa tatctgttct tatccgtgac gatatgtata
     1621 tatatctgca cgaagcattc gctcggcggg gtcatccgtg acttgaacgg cgctcgttct
     1681 cactgccaga ggttgcaaat aatctgatac caacggacag aatgattgac tgtcaggtac
     1741 ccatctccaa ctgtcattat cggatctggc ctggcgatca atgggggcag gtgccggcca
     1801 tgatgtgatc gaagccattt cgatcggtga atcgtttggt cagctggtat gggacgcgca
     1861 attcatcgcg acccgccgcc ggacggacgc tctacaaagc tgcaatctgc gcgtcgaaca
     1921 atgggtcaaa atccatggcg aaggccgccg caattgcaat cggcgccaca attactcgaa
     1981 gcaagatttc atcacctggg cgaaggcccg cgcacggtga ctgacgcagt gtttggcatc
     2041 cggtgccatc tcgccgaacg tttcgctgcc gccctcgggg aggaacatcg gatcatagcc
     2101 gaaaccatgt gtgccgcgcg gcggccagac catggtgccg ttgacccgtc cgacataggt
     2161 ctcggtgcgc ccgtccggcc aggcgacaca caaagcagcc acgaaccatg cccgcttatc
     2221 ggctgcatca ccggcgcgtt cgtgcacctg cgccatggct ttggcgaagt ctttttccgg
     2281 accggcccac cgtgccgaca gcgggccggg cgcgccatcc aacgcggcgg cgcaaaagcc
     2341 ggaatcgtcg gagaatgccg gcagtccggt ggcagtcgcc gcggccaatg ctttgagttg
     2401 cgcgttgccg gcgaagtcgg gggcggtttc ctccggctcg ggaaggccaa gcgcgccggc
     2461 ggagacgatt tcgactttgt atggacgtag cagctccgtc agttcggcca gtttaccctg
     2521 gttgtgactg gccaggacga gtttgctgcc gggcaggatc ttgcggccca tcagtcgccc
     2581 atggctttgc gttgcgctgt gaacagcgcc gcggttccgc tgcgggcgag ccggagcagg
     2641 gacgaaaatt cggcctccga gaaggagttc ttctccgctg tcgcctggat ttccaccagg
     2701 cctccagcat cggtcagcac gaaattggcg tcagcgtcgg cggtggagtc ttcatcgtag
     2761 ttcaggtcga gcaccggttc gccaccgacg atgccgcagg acactgcagc gacctggcct
     2821 gtcagcggca tggttttcag cacgttcatc gtcaccaggt ggcggaacgc caaagcgaga
     2881 gcaacccagg cgccggtgat cgaggcgcag cgggtgccgc catcggcatt caatacatcg
     2941 cagtcgaggg tgatcgacat ctcgcccatc gctttgcggt cgaccacggc gcgcaacgag
     3001 cggccgatca ggcgttggat ttcctgggtg cggccggatt gtttgccgcg tgccgcttcg
     3061 cggtcgccgc gcgtgtgggt ggcgcgggga agcatcccat attcggcggt gacccatcca
     3121 aggccggagt tgcggaggaa cggggggacg cgggtctcga ccgaggcgac gcacagcacc
     3181 tcggtgcggc ccatgcggat gaggcaggag ccctcggcgt ggcgggaaaa gcctgtggtg
     3241 agggaaatgt ctcgtaatgc gtcgg
//
LOCUS       DATAVD010001465         5744 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2745725, whole genome shotgun sequence.
ACCESSION   DATAVD010001465 DATAVD010000000
VERSION     DATAVD010001465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5744
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2745725"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(111..269)
                     /locus_tag="VHX39_28075"
     CDS             complement(111..269)
                     /locus_tag="VHX39_28075"
                     /inference="COORDINATES: protein motif:HMM:NF021474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapB family
                     antitoxin"
                     /protein_id="HEX3995051.1"
                     /translation="MRTDIDIDDDLLTEAMAATGLPTKKATVEEALRRMVTRHRRRAA
                     LADMAGLG"
     gene            526..1101
                     /locus_tag="VHX39_28080"
     CDS             526..1101
                     /locus_tag="VHX39_28080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEX3995052.1"
                     /translation="MHHRHSHQHHDRRFARRGHRQADLQSGHGRHGYSGRSSLGRFFA
                     HGDLRLVILHLIAEKPRHGYEIIKAIEEQVGGAYSPSPGVIYPTLTLLEELGHVTVSV
                     GDGAKKLHTITTEGRAYLEAYRPAVEALLARMEEANRVYGGGPAPQILRAMENMKLAL
                     QLRLARGPLSDEQINAVAAAIDGAAISVERA"
     gene            1131..1508
                     /locus_tag="VHX39_28085"
     CDS             1131..1508
                     /locus_tag="VHX39_28085"
                     /inference="COORDINATES: protein motif:HMM:NF020457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DOPA 4,5-dioxygenase family protein"
                     /protein_id="HEX3995053.1"
                     /translation="MTEIRGYHAHVYYGAETRKIAEGLRDTIISRFAVKPGGFSDEPR
                     GPHPISQFNIIFQAEEFQKLVPWLMLNHEGLDVLVHPLTDSSYDDHSKNALWIGTPVP
                     MRLDVLRPTYRPEQLPTTADHAA"
     gene            1699..3990
                     /locus_tag="VHX39_28090"
     CDS             1699..3990
                     /locus_tag="VHX39_28090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011930521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HEX3995054.1"
                     /translation="MPSIIVEFAEALSTINRPSAFFVAGTEQMLAPGLVVAGIGPIAL
                     PLLPVQAEQLIAAADRAPYGRGEDTLTDIAVRRTWQIGADRVGITGKHWAGTIKAIVA
                     RVAEGLGVDGPVEAELYKLLIYDQGSFFVPHRDTEKVSGMFATLVLALPSVSEGGELI
                     VRHKDREARLGLHCEEPSEVAFAAFYADCVHEVLPVTQGYRLVLVYNLVRRGAGRLPT
                     APNYDDEQKALTALLKRWAEAPRPPGETEPEKLIYAMEHAYTPAELGFQTLKGADAGI
                     APVVVAAAQRAGCEVHLALITVEESGSAVQTGGPSRYRRDRYHDDDDEAEEDEFEIEE
                     VIERRAFALNWRRPDGDPSPLMELPIMEEEFSPPVSFDDLEPDEEHFHEATGNEGASY
                     ERTYCRAALILWPRDRLLAVINQAGLDVTLPFLADLADRWAADSDSSTLEQARVLSEH
                     MLAGWPWGDWYPRRDNELTASGRFLNLLRQLKDASRLEAFLTTLADRRGFDIGDGAAI
                     ADALLTLPPDGAAPLATRLIEGAATPALAACANLLARLSMSNPTLATGATQALVAVLP
                     GGPARDSAAQAWRHGPGVGANSIVDLFTALGRIDTTLGSAAADHVLAWPATYDFDTVL
                     IPAMGVLLGVPETVGQAVVQRLRDACVAHLDARIALPLEPPGDWRRDTTLGCHCKDCQ
                     ALGVYLGDATQKVWVFAAAEPRRRHVESTIRNAVSDVDMATERRGSPHRLICTKNQAS
                     YDRRRVQRAKDLTERERLTGSSV"
     gene            4079..4945
                     /locus_tag="VHX39_28095"
     CDS             4079..4945
                     /locus_tag="VHX39_28095"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3995055.1"
                     /translation="MSDTNTGRNAAQITYWNSEAGPRWVAMQERMDAMLAPLMNAALD
                     RARPKVGETVLDIGCGCGATLLELADRVGPDGSVMGVDISAPMLDRARERVRDSAMRN
                     VRLTLSDAAMHAFEPGAFDLAFSRFGVMFFDDPDRAFANIRAALAATGRLAFVCWAPP
                     RDNPWLTVPLTVARPHLPPQPESDPAAPGPFAFADPDRVGGILTRAGYSAIDIARHDT
                     SMRICGPGEAEQAAHFVVASGPVGRAMAGVDPIARAAAEQAILAEFRRLEGPGGIALP
                     GSVWLVSARPGN"
     gene            5022..5360
                     /locus_tag="VHX39_28100"
     CDS             5022..5360
                     /locus_tag="VHX39_28100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995056.1"
                     /translation="MGTYVGLDVSLKATSVCILGDDGARVFEGKVATEPAVLAKLIRK
                     RAIARQLGCPVSDSKRAPDVVRVGLESGPTSAWLTHALTAEGLPVVCLDARHAQAVLS
                     MRPNKWLWCK"
     gene            complement(5408..>5744)
                     /locus_tag="VHX39_28105"
     CDS             complement(5408..>5744)
                     /locus_tag="VHX39_28105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_047389784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HEX3995057.1"
                     /translation="KGQGSIPRTVTLDGYAASHRAVREMKADGELPADTKLRSSKYLN
                     NLIEQDHRGVKSRIGPMLGFKRFKTAAITIAGIELLRRIRKGQFNLGRLRLRDRRAPA
                     VWEAVLAAR"
BASE COUNT         1007 a         1843 c         1858 g         1036 t
ORIGIN      
        1 ctctggaatg tcgagaccac gcagatggac gatccacacc gagctatcga ccacgatcac
       61 ggaagcggct taccccctcg cccttctcgc attgcgtcca aatcgccctc ctatcccaag
      121 ccagccatgt cggccagcgc ggcccgccgc cgatggcgcg tcaccatccg ccgcagcgcc
      181 tcttcaaccg tcgccttctt ggtcggcaac ccggtcgctg ccatcgcctc ggtcagaaga
      241 tcgtcgtcga tatcgatgtc cgtccgcatg cttagagcct atctcagtag ggcgctttgg
      301 atttggaaaa tgcgtcgaat tcaataggtt atccgtcgga ggatggccta ctgagatagg
      361 ccctcagctg atgtgtagat ggttgatcga tcatacacac agattgcggc cggtccagcg
      421 gccgtccgca agaatgccct tctgcacgac aagcggccca cttgaattcg agtgtatata
      481 gatatatcta atatcgcgtt atgtcgaaac ccatctggat tgcttatgca ccatagacac
      541 tcgcaccagc atcacgatcg gcggtttgcc cgccgggggc accgccaagc cgatcttcag
      601 tccggacacg ggcggcatgg ctacagcggc cgatccagcc ttggccggtt cttcgctcat
      661 ggcgacctgc gcctggtcat tctccatctc atcgctgaga agccgcggca cggttacgag
      721 atcatcaagg cgatcgagga gcaggtcggc ggcgcctaca gcccaagccc gggcgttatc
      781 tacccgacgc tgaccctgct tgaggaactt ggtcatgtga cggtcagcgt tggcgacggt
      841 gcgaagaagc tgcatacgat taccactgaa ggccgggctt acctcgaagc ttaccgtcct
      901 gccgtggaag ctctcctcgc ccgtatggaa gaggccaatc gcgtgtatgg cggcggtccc
      961 gcgccacaga ttttgcgtgc gatggagaac atgaagctcg cgctgcaact gcgtcttgca
     1021 cgcggtccac tcagcgatga gcaaatcaac gccgtggctg ctgccattga cggcgcagcc
     1081 atcagcgtgg aacgggcctg atgtcttgta aaccgaacag gagaaaccca atgactgaaa
     1141 tcagaggcta ccacgcccat gtctattacg gcgccgagac ccggaagatc gccgagggtc
     1201 tgcgagacac gatcatcagc aggttcgccg tcaagcctgg tggcttcagc gatgaaccga
     1261 gaggcccaca tccgatctct cagttcaaca ttatcttcca ggccgaagag ttccaaaaac
     1321 tggtgccttg gctgatgctg aaccacgaag gcctggatgt tctcgttcac cctctgaccg
     1381 acagttccta cgatgaccac agcaagaatg cgctgtggat tggtacgccg gtgccgatgc
     1441 ggctcgacgt tctgcggccg acctatcgtc ccgaacagtt accgaccacc gcggaccacg
     1501 cggcctgacg ggcgctgaca gggccaccca ctccggacgc ggcattcgcg tatagccgcg
     1561 tccccgcttg cgctggctgg ctttcgccag cgccctgtcc cgccactatg acctgggcac
     1621 ttcacgatgc ggcaatggct gcagtaagga cggccggccg gggtcaaccc gcccccgaac
     1681 cacatcgaac gtatcgacat gccatcgatc attgttgaat ttgccgaggc cctcagcacc
     1741 atcaaccgtc ccagcgcgtt tttcgtcgcc ggtactgaac agatgctcgc gcccgggctg
     1801 gtggtcgcgg gcatcggacc gatcgccctg ccgctgctcc cggttcaggc cgagcagctc
     1861 atcgctgccg ccgaccgcgc gccgtacgga cgcggcgagg acacgctcac cgacatcgcg
     1921 gtgcgccgca cctggcagat cggcgccgac cgcgtcggca tcacgggcaa gcactgggcg
     1981 ggcaccatca aggcgatcgt ggccagggtc gccgagggtc ttggcgtcga cggcccggtc
     2041 gaggcggagc tctacaaact gctgatttac gaccaaggca gcttcttcgt tccgcatcgc
     2101 gataccgaga aggtgtcggg catgttcgcc accctggtgc tggcgctgcc gtcggtgtcc
     2161 gagggcggcg agctgatcgt gcggcacaag gaccgcgagg cacgcctggg tttgcactgc
     2221 gaggaaccgt cggaggtcgc cttcgccgcc ttctacgccg actgcgtgca tgaagtgctg
     2281 ccggtcaccc agggataccg gctggtgctg gtctacaatc tcgtgcgccg gggtgcggga
     2341 cggctgccca cagccccgaa ctatgacgac gagcagaagg cgctcacggc actgctgaag
     2401 cgatgggctg aggcgccccg cccgccggga gagaccgaac ccgaaaagct gatttatgcg
     2461 atggagcacg cgtacacgcc ggctgagctc ggtttccaga cactgaaggg ggcggatgcg
     2521 gggatcgcgc ctgtggttgt cgccgccgct cagcgggccg ggtgcgaggt ccatctggcg
     2581 ctgatcaccg tcgaggagag cggcagtgcc gtgcagacag gcggccccag ccgctaccgc
     2641 cgcgaccgct accatgacga tgatgacgaa gcggaggagg atgaattcga gatcgaggag
     2701 gtcatcgagc gccgtgcgtt cgcactgaac tggcgccgcc ccgacggtga tccgtctccc
     2761 ctgatggagc tgcccatcat ggaagaggag ttttctcccc cggtgtcgtt cgacgacctc
     2821 gaaccggatg aggagcactt ccatgaggcg actggcaacg agggggcgtc atacgagcgc
     2881 acctactgcc gagcggcgtt gatcctgtgg ccacgtgacc ggcttctggc ggtgatcaat
     2941 caggccgggt tggatgtcac actgcccttc ctggccgacc tcgccgatcg ctgggccgcc
     3001 gatagtgaca gttccaccct cgagcaggcg cgggtgttgt cggagcatat gctggccgga
     3061 tggccgtggg gcgactggta tccacgccgg gacaacgaac tcacggcgag tggacggttc
     3121 ctgaacctgc tgcggcagtt gaaggacgcg tccaggctgg aggcgttcct gacgacgctg
     3181 gccgaccgcc gcggatttga catcggggac ggggcggcaa tcgcagatgc tctgctcacc
     3241 ctgccgccgg atggcgccgc accgctggcc acccgcctga tcgaaggggc tgcgacacca
     3301 gcgttggcgg cgtgtgccaa cttgctggcc cgcttgtcga tgtcgaatcc cacgctcgcc
     3361 acaggcgcca cccaggccct ggttgccgtc ctgcctggcg gcccggcgcg cgattcagcg
     3421 gcccaggcct ggcgtcacgg ccctggtgtg ggggcgaatt ccatcgtcga tcttttcacc
     3481 gcgctcgggc gcatcgatac gacgctcggc tccgccgcgg ccgatcatgt tctcgcgtgg
     3541 ccggcgacat acgatttcga tactgtcctg attccggcga tgggcgtgct gctgggcgtg
     3601 ccggagacgg tgggtcaggc ggtggtgcaa cggttgcgtg atgcctgtgt cgctcatctg
     3661 gatgcgcgga tcgcgctgcc tctggaaccc cccggggact ggcggcgtga caccacgttg
     3721 ggttgccact gcaaggattg ccaggcgctg ggggtgtatc tcggggacgc cacacaaaag
     3781 gtctgggttt tcgccgctgc cgaaccgaga cgccgccacg tggagtcgac gatccgtaac
     3841 gcggtcagcg acgtggatat ggcgaccgag cgccgaggca gcccccatcg cctgatctgc
     3901 accaagaacc aggccagcta cgaccgccgg cgtgtccagc gcgcaaagga cctgacggag
     3961 cgcgagcggc tgaccggatc atcggtgtga tgacagacgc tgccgggttg ccgctcgacc
     4021 ctttgaaata cgcctggtcg caggttgcca taagcccata gctcgagagg agcgccccat
     4081 gtccgacaca aacactggcc gcaatgcagc ccagattacg tactggaaca gtgaggccgg
     4141 accgcgctgg gtggcgatgc aggaacgcat ggacgcgatg cttgcgccct tgatgaacgc
     4201 cgccctggat cgtgcccggc cgaaggtcgg cgaaaccgtg ctcgatatcg gttgcggctg
     4261 tggcgcgaca ctgttggaac tggctgaccg cgtcggcccg gacggtagcg ttatgggcgt
     4321 cgacatttca gcgcccatgc tcgaccgcgc ccgcgagcgc gtgcgggaca gcgccatgcg
     4381 taacgtccgc ctgacgctgt cggacgccgc gatgcacgct ttcgagccgg gggccttcga
     4441 cctcgctttc tcccgctttg gggtgatgtt cttcgatgat ccggacagag cgtttgccaa
     4501 tattcgtgcg gcgctcgccg caactgggcg gctggccttt gtttgctggg cgccgccgcg
     4561 ggacaaccca tggctgaccg tgccgttgac ggtggcccgg ccgcacttgc caccgcagcc
     4621 ggagagcgac cccgcggcac ccggtccctt cgccttcgct gacccggaca gggtcggcgg
     4681 catcctgacc agagccggat attcggccat cgatatcgcg cgtcacgaca ccagcatgcg
     4741 gatctgcggc cccggtgaag cggagcaggc cgcgcatttc gtggtggcga gcggacccgt
     4801 cgggcgggcc atggcgggtg tcgacccgat tgcacgtgcc gccgcggagc aggccattct
     4861 cgcggaattc cgccggcttg agggtcccgg cgggatcgcg ctacccggca gcgtctggct
     4921 ggtctctgcc cgcccaggaa attgatccac atgggctaat cgcggcggct ctcctcgccg
     4981 gccggtacaa ccggccttgg tttgaaccaa ggagaacagc catggggacg tatgttggcc
     5041 tggacgtgtc gctcaaggcg accagcgtgt gcattctggg agatgatggt gctcgggtgt
     5101 ttgaagggaa ggttgccacg gagccggccg tccttgccaa gctgatccgc aagcgggcta
     5161 tagcgcgaca gctcggatgt ccagtcagcg acagcaagcg ggccccggat gtggtccggg
     5221 ttggcctgga aagcggaccg acctcggctt ggctgaccca tgcgctgacg gcggaggggc
     5281 tgccagtggt atgcctggat gcccggcatg cgcaggcggt gttgtcgatg cgacccaaca
     5341 aatggctctg gtgcaaatag catgacgcgc caaaggtcgt ggctgcgagg tctgcggtgt
     5401 tgtcgcttta ccgggctgcc aggaccgcct cccaaacagc aggcgcacgt cgatcccgaa
     5461 gacgcagccg accgaggtta aactgcccct tgcggatccg tcgcagcaat tcgatcccgg
     5521 ctatggtgat cgcggcggtc ttgaagcgct tgaacccgag catcggaccg atccgcgact
     5581 tcacgcccct atggtcctgc tcgatgaggt tattcaggta cttcgacgac cgcagcttcg
     5641 tgtcagctgg cagttcaccg tcagccttca tctcacgcac ggcgcggtgc gatgcggcgt
     5701 agccatccaa cgtgacagtc cgcgggatcg agccctgacc cttg
//
LOCUS       DATAVD010001466         3495 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3114861, whole genome shotgun sequence.
ACCESSION   DATAVD010001466 DATAVD010000000
VERSION     DATAVD010001466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3495)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3495)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3495
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3114861"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            82..2316
                     /locus_tag="VHX39_28110"
     CDS             82..2316
                     /locus_tag="VHX39_28110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3995058.1"
                     /translation="MTSYIGTATSRVDGRAKVTGAAKYAADYNVPGLLHGSLVTSTIA
                     KGRIARIDAGAALSVDGVVHVLTHENRPAMPSDDAAYKDDVAPEGSPYRPLYDATIRF
                     SGQPVALVVAEAPEIARFAASLVRVQYETDAHVTDVHRNRSAARALEGHASEQNPFLP
                     PRPRGSAETAMATARIRHDAEYFVPIEHHNPMELYASTVVYETGGALTIYDKTQGVQN
                     VHRYVVSVLGMEPKDVRIMSPFVGGAFGSGLRPQYQVILAGLAARALKRSVRLVLTRQ
                     QMYGLGYRPAMIQRIVLGANDAGALHAVTHDAVTVTSQFETYYRQETGWSGLLYRSPH
                     ASHTHRLAPLDLPTSCDMRAPSAATAVYALECAMDELAVALKVDPLELRLRCHSDRDQ
                     HTDRPYSSKALRDCYRQGAEAFGWHRRSSVPRSMREGTELVGWGMATGVWEALQVPIA
                     VRIVLTANGHAEVACATSDIGTGTYTIMAQVAAEMLGLPLDNVTIRLGDSSLPQSPVE
                     GGSWMAASVTHGIVTTAAAVREEVLKLAQNMPGSVLTAATADDTALVDGRLVDKHDGT
                     RAVSVTDAMRHGGVDRIEREETTTFASDAGHSHNTHSAIFAEVKVDEQLNVVRVTRVV
                     SAVAAGRILNLKTARSQIIGGVVWGIGMALHEETLIDHTLGRIMNANIAEYHVPAHAD
                     VHEIQVIFVDEPDSTINPLGIKGLGEIGIVGVAAAIANAIYHATGKRVRELPITIDKL
                     QREA"
     gene            complement(2322..2407)
                     /locus_tag="VHX39_28115"
     tRNA            complement(2322..2407)
                     /locus_tag="VHX39_28115"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2372..2374),aa:Leu,seq:gag)
     gene            2448..3140
                     /gene="lipB"
                     /locus_tag="VHX39_28120"
     CDS             2448..3140
                     /gene="lipB"
                     /locus_tag="VHX39_28120"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEX3995059.1"
                     /translation="MGSITRAAPPEWRIAEGLTPYPDALSLMRERVAAIRAGTAGELV
                     WSVEHPPIYTAGTSARPAELTDPTRFPTFAAGRGGQWTYHGPGQRVVYVMLDLTRQHG
                     AVPVNDIHCYVNALEEWLIRALDRFNVKGERRKGRVGIWVTNQSAGTEAKIGAIGVRV
                     SHWVSWHGVALNVDPDLTHFSGIVPCGVRDHGVTSLAALGIPATMHDGDVALRAAWDE
                     VFGDAASPVCAA"
     gene            3270..>3495
                     /locus_tag="VHX39_28125"
     CDS             3270..>3495
                     /locus_tag="VHX39_28125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995060.1"
                     /translation="MALPFTTPQLGGARVRLSHNRGVELIVRNLAGGRGVYVMPLTAM
                     SALCRPTLFDKVVCNRVAFLETVTPATVRAI"
BASE COUNT          636 a         1086 c         1118 g          655 t
ORIGIN      
        1 gtgcactcag gcaggcagcc gccggcacgc cgcagtcgca gtccaacaag aaaatcgcct
       61 gatcggagag cgagaattcc catgacctca tatattggca cagcgacatc tcgggtcgac
      121 ggccgcgcca aggtgaccgg cgcggcaaaa tacgccgccg attacaacgt accgggcctg
      181 ttgcatggct ccctcgtcac gtcgacgatc gccaagggcc gcatcgcgcg gatcgacgcc
      241 ggcgctgcac tgtccgtcga tggtgtggtc cacgtgctga cgcacgagaa ccggccagcg
      301 atgccgagtg acgatgctgc ttacaaagac gatgtggcgc cggaaggctc accgtatcgt
      361 ccgttgtatg acgcgaccat tcgcttcagt ggtcaaccgg ttgcactggt ggtggccgag
      421 gcgccggaga tcgctcgctt tgcggcgtca ttggttcgcg tgcaatatga gaccgatgca
      481 catgttaccg atgtgcatcg taaccgttcc gcagcccgtg cattggaagg ccatgcctcg
      541 gagcaaaatc cgtttctccc accgcggccg cgtggctctg ccgagacggc catggcaacc
      601 gcccgaatcc ggcacgatgc tgagtatttc gttccgatcg agcatcacaa tccgatggag
      661 ttgtatgcct cgacggtggt ttacgagacc ggcggagcgc tgacgatcta cgacaaaacc
      721 cagggggtgc agaatgttca tcgctatgtt gtcagtgttc tcggcatgga gccgaaggat
      781 gtacgcatca tgtcgccgtt tgtgggtggc gcgttcggtt cgggcctacg cccacaatat
      841 caggtgatcc tcgctgggct ggccgcacgt gcactgaaac gctcggtgcg tctggtgctg
      901 acaaggcagc agatgtacgg gcttggctac cggcccgcca tgattcagag gatcgtactg
      961 ggcgccaatg acgctggggc cctccacgcc gttacccatg acgcggtcac ggtgacatcg
     1021 cagttcgaga cctattatcg gcaggagacc ggctggtccg gcctgctata caggtcgccg
     1081 catgcaagtc atacgcatcg gcttgcgccg ctcgacctgc cgacctcgtg cgatatgcgt
     1141 gcgcccagtg cggcaacggc ggtttatgcg cttgagtgcg cgatggacga gcttgccgtc
     1201 gcattgaagg tcgatccgct cgagttacga ctgcggtgtc attcggatcg cgatcagcac
     1261 actgaccggc cctacagcag caaggcgctg cgcgattgtt accgccaggg tgcggaagcc
     1321 tttggctggc acaggcgtag ttctgtaccg cgttcgatgc gtgagggtac cgagctggtg
     1381 ggttggggca tggcaaccgg cgtctgggaa gcgctgcagg tgccgatcgc ggtgcggatc
     1441 gtgctgactg ccaatggcca tgccgaagtg gcttgcgcaa cctccgacat cggcactggc
     1501 acttacacga tcatggcgca ggtcgctgcc gaaatgctcg ggctgccgct cgacaatgtc
     1561 acgatcaggc ttggcgattc atcgctgcct cagtcgccgg ttgagggtgg atcgtggatg
     1621 gccgcctcgg tgacgcatgg cattgtcacg acggccgctg ccgtgcgcga agaagtgctg
     1681 aagttggcac agaacatgcc cggctcggtg ctgaccgcgg caacggcgga cgataccgca
     1741 ttggtggacg gcaggctcgt tgataagcac gacggaacgc gtgccgtttc ggtgaccgac
     1801 gcgatgcggc atggtggcgt cgatcgcatc gagcgggagg aaaccacgac attcgccagc
     1861 gatgccggac attcgcacaa cacacactcg gcgatcttcg ccgaggtgaa ggtcgatgaa
     1921 cagctcaacg tggtccgtgt cacgcgcgtt gtcagtgcgg ttgcggccgg ccgtatcctg
     1981 aatctcaaga ctgcgagaag ccagatcatc ggcggcgtgg tctgggggat cggcatggcg
     2041 ctgcacgagg aaacgctgat cgaccacacg ctcggccgga tcatgaacgc caacatcgcg
     2101 gaatatcatg tgccggcgca tgccgatgtg catgagatcc aggtgatctt cgtcgatgag
     2161 ccggacagca ccatcaatcc gctcggcatc aagggattgg gcgaaatcgg tatcgtcggc
     2221 gttgcggcgg cgatcgccaa tgcgatttat cacgcgaccg gcaaacgggt gcgtgagtta
     2281 ccgattacga tcgataagct gcaacgcgag gcctgatggt ttggtgcggt cgagaagact
     2341 cgaacttcca cgggatttct cccacaagca cctcaagctt gcgtgtctac cattccacca
     2401 cgaccgcaac gtgggctaag caggcgcgga tatagcggat caccaccatg ggttcaatca
     2461 cccgagcagc ccctccggaa tggcggatcg ccgagggcct gacgccatac cccgacgccc
     2521 tctccctgat gcgcgagcgc gtcgccgcga tccgtgccgg cacggcgggc gaactcgtgt
     2581 ggtcggtcga gcatccgccg atctacaccg ccggcacctc cgccaggccc gccgagctca
     2641 ccgacccgac gcggttcccg acctttgcag ccggtcgcgg cgggcagtgg acctatcatg
     2701 ggccaggcca acgtgtggtg tatgtgatgt tggacctgac ccgccagcac ggcgccgtgc
     2761 cggtcaacga catccactgc tacgtcaacg cccttgagga atggctgatt cgtgccctcg
     2821 accgcttcaa cgtcaaaggt gagcggcgca agggccgggt cggcatctgg gtcaccaacc
     2881 agtccgccgg caccgaagcc aagatcggcg ccatcggcgt gcgggtcagc cattgggtgt
     2941 cctggcacgg cgtcgccttg aacgtcgatc cggacctgac gcacttctcc gggatcgtgc
     3001 cgtgcggcgt gcgggaccat ggcgtcacca gcctcgccgc tctgggtatt ccggcgacga
     3061 tgcacgatgg cgatgtcgcg ctgcgggcgg catgggacga ggtgttcggc gatgccgcca
     3121 gcccggtgtg cgccgcgtag cacccgctta attcctccgg ccggttaatc cttcattaag
     3181 caattcagcg catgctccat gcgccgatgc cccagaaaac gcttccttcc gccagtcctt
     3241 accatccgac cacgtttcag gaacgcggcg tggcgctgcc ctttaccacg ccacagcttg
     3301 gcggcgcgcg agtccggctg tcgcacaacc ggggggttga actcatcgtg cgcaatctgg
     3361 ccggtggccg aggggtctac gtcatgcccc tgaccgcgat gtcggcgctc tgccgcccga
     3421 cgctgttcga caaggttgtt tgcaaccggg ttgcctttct ggaaacggtc acccccgcca
     3481 cggttcgtgc catcg
//
LOCUS       DATAVD010001467         2457 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1813635, whole genome shotgun sequence.
ACCESSION   DATAVD010001467 DATAVD010000000
VERSION     DATAVD010001467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2457
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1813635"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..310)
                     /locus_tag="VHX39_28130"
     CDS             complement(<1..310)
                     /locus_tag="VHX39_28130"
                     /inference="COORDINATES: protein motif:HMM:NF017559.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HEX3995061.1"
                     /translation="MVARPSRSLWLLFPWFIAAAMSVVIAVNCFMAWSALHTFPGNAG
                     SDGFDLSNRYNAIIQRMKQEAGLGWGVAAQVDQASHPVVVLTDRSGTALAGAEIEATA
                     Q"
     gene            complement(334..1785)
                     /gene="ccoG"
                     /locus_tag="VHX39_28135"
     CDS             complement(334..1785)
                     /gene="ccoG"
                     /locus_tag="VHX39_28135"
                     /inference="COORDINATES: protein motif:HMM:TIGR02745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HEX3995062.1"
                     /translation="MSFFGKDKLAVDQSEDSLYADRVRVYPKTVHGPVRRFKWVVLIV
                     CLTIYYTLPWLRWNRGIGRPNQAVLLDIFHERFWFFNLEFWPQDIFYLTGLLIMGAVA
                     LFLVTSLFGRLWCGYTCPQTVWTDLFMWVEREIEGDRNERMKRDAGPADFDKVWRKGL
                     KHVVWLGVAFWTGGAWIMYYVDAPTVTVEFWKGAASTPVYLFTALFTATTYLLAGWAR
                     EQVCTYMCPWPRFQAAMLDEQSFTTTYQAWRGEPRAKGKRISGSGGDCVDCGACVTAC
                     PTGIDIRDGSQLECINCGLCIDACNHVMERTGRPGWLITWDTLADQTAKAAGTHVPLK
                     LIRPRTIIYLSALGLIAAVMIIALALRPGLGLAVLHDRAPLFVMLANGDIRDGYTVKI
                     VNKSPTQSVFEISSQGLFGAMLTETNEELGPAATLGLPVAGDSVGTFRVMVTGQPAAL
                     VEGSEPIDFSLRDTTTGEVTVYHSVFMGPVQRR"
     gene            complement(1794..>2457)
                     /gene="ccoP"
                     /locus_tag="VHX39_28140"
     CDS             complement(1794..>2457)
                     /gene="ccoP"
                     /locus_tag="VHX39_28140"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
                     /protein_id="HEX3995063.1"
                     /translation="QRDAVDRDVAAVAQQRAGAMDQIKALSFADIRKDPQLLAVAETA
                     GRITFAENCQPCHGAGGGGNPGFPALAAGNWLWGGKLEDIQQTVTFGIRSGLDDARNS
                     QMPRFGADGILKPAEIQAVADYVTTLFALPAADTDLTEGKHVFAENCAVCHGDAGQGN
                     REVGGARLAARTHLHGDDRAAIVAQITNPRMGVMPNWNARLDPAKIKSVTLYVHSLGG
                     GE"
BASE COUNT          511 a          794 c          695 g          457 t
ORIGIN      
        1 gttgcgcagt cgcctcgatc tccgcaccgg cgagtgcagt cccggatcga tcggtcagta
       61 caacgaccgg atgactggcc tgatcaacct gggccgcgac gccccaaccc aggcccgcct
      121 cctgcttcat ccgttgaata atggcgttat agcggttcga cagatcgaac ccgtcgctgc
      181 cggcattgcc cgggaatgtg tggagtgccg accaggccat gaagcaattg actgcgatga
      241 ccacactcat cgccgccgcg ataaaccagg gaaacaatag ccacagactt cgggacggcc
      301 gtgctaccat acctttatgc cgtattatca cgactacctc cgctgtaccg gtcccatgaa
      361 caccgagtga tagactgtca cctcacccgt cgtcgtatcc cgtaacgaaa agtcgatcgg
      421 ctcggacccc tcgaccaggg ccgccggttg tcctgtcacc ataacccgga aggtgccgac
      481 actgtcgccc gccaccggca aacccagtgt cgccgctgga ccgagttcct cgttcgtctc
      541 ggtcaacatc gcaccgaaca gcccttgcga gctaatctcg aacaccgact gggttggcga
      601 cttattgacg atcttcacgg tgtagccgtc gcggatgtcg ccgttcgcta gcattacgaa
      661 aagcggtgcc cggtcatgca gcacggccag accaagccca ggtcgaagag caagagcaat
      721 gatcataacg gcagcgatga ggccgagtgc ggaaagataa atgatggttc gcgggcggat
      781 caacttcagt ggaacatggg tgccggccgc cttcgctgtt tgatctgcga gtgtgtccca
      841 ggtgatcagc caacccggcc ggccggtccg ctccatgacg tggttgcagg cgtcaatgca
      901 caaaccgcag ttgatgcatt ccagttggct gccgtcacga atgtcgatgc cggttgggca
      961 ggccgtgacg catgcgccgc aatcgacgca atctccgccg gagcccgaga tccgtttccc
     1021 tttcgcccgc ggttcacccc gccaggcctg gtaggtggta gtaaaactct gttcgtccag
     1081 catcgctgcc tgaaagcgcg gccagggaca catatacgtg cagacctgct ctcgggccca
     1141 gccggccagc aggtacgtgg tcgccgtaaa tagcgccgtg aacagatata ccggggtgga
     1201 cgctgcgccc ttccagaact caaccgttac ggtcggggca tcgacataat acatgatcca
     1261 cgcgccgccg gtccagaacg caacaccgag ccaaaccacg tgtttcaatc ccttgcgcca
     1321 aaccttgtcg aaatcagcgg gaccggcatc gcgcttcatg cgttcgttac ggtcgccctc
     1381 gatctcgcgc tcgacccaca tgaacaagtc ggtccagacc gtttgcgggc aggtgtagcc
     1441 gcaccacaat cggccaaaca ggctggtgac cagaaacaac gcgacggcac ccatgatcaa
     1501 caagccggtc agatagaaga tgtcctgcgg ccagaactcg agattgaaaa accagaagcg
     1561 ctcatgaaag atatccagca ggaccgcctg attgggccgc ccgatgccgc ggttccaacg
     1621 tagccagggc aacgtgtaat aaatcgtcag gcaaacgatc agcacaaccc atttgaagcg
     1681 gcgcacggga ccatgcaccg tctttgggta aactctcacc cggtcggcgt acagactgtc
     1741 ctcggactga tccaccgcca atttgtcctt gccaaaaaat gacatgatgg cggttattct
     1801 ccgccgccca gagagtggac atacagcgtc acgctcttga ttttcgccgg atcgagccga
     1861 gcgttccagt tcggcatgac ccccatacga gggttggtga tctgcgctac gatcgccgcg
     1921 cggtcgtcgc catgcaggtg ggtccgcgcc gccagtcggg ccccaccgac ttctcgattg
     1981 ccctgtccgg cgtcaccatg acagacggcg cagttttcag cgaagacgtg cttgccttcc
     2041 gtcaggtcgg tgtcggcggc cggcagtgca aacaaagttg tgacgtaatc agcgacagcc
     2101 tgaatttctg ccggcttcag gatgccgtcg gcgccaaacc gcggcatctg gctgttgcgc
     2161 gcgtcatcga gcccactacg aatgccgaac gtgacggtct gctggatatc ctcgagtttg
     2221 ccaccccaca accagttgcc tgccgccagc gccggaaacc cgggattgcc gccgcctccc
     2281 gcgccatgac acggctggca gttctcagca aaggtgatgc gtccggcggt ttccgccact
     2341 gcaagcagtt gcggatcctt acggatgtct gcgaacgaca gtgccttgat ctggtccatg
     2401 gcgccggcgc gctgctgcgc caccgcagcg acgtcccggt ccacggcatc gcgctga
//
LOCUS       DATAVD010001468         1827 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2563325, whole genome shotgun sequence.
ACCESSION   DATAVD010001468 DATAVD010000000
VERSION     DATAVD010001468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2563325"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..997)
                     /locus_tag="VHX39_28145"
     CDS             complement(<1..997)
                     /locus_tag="VHX39_28145"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX3995064.1"
                     /translation="MAQQRTLTPTPSAPSRAPGSPQAPETPELPLVESPETQPHDDAR
                     ARQPTLRRRWLRWGLFALLPLVLIGATYWYVIGGQIMSTDDAYVNADKVGISTDVSGT
                     VQSVDVVNNERVAAGQILFRLNPRQFQIALDNARANLAQAALSLDAMKVDYQRMLSDA
                     QAQQAQVNLDSINFNRTKLLLNNGTTAQATYDQANAALQADTAKLQSLQHQAQVQLAR
                     LNGSADTPTTQLPAYQQAEAQVEEAQRQLDDAVVKAPFSGIATDVSSTTQGRYLPAST
                     TAFYLVDTEHVWVDAEPKETELTYVRPGQPVTVTVDAYPNRVWHGTVQSISPAASQ"
BASE COUNT          343 a          524 c          581 g          379 t
ORIGIN      
        1 cctgcgacgc cgctgggctg atgctttgca ccgtcccgtg ccacactcgg ttcggatagg
       61 catcgaccgt caccgttacc ggctgccccg gccgtacgta ggtcagttcg gtctccttcg
      121 gctccgcgtc gacccagaca tgctccgtgt cgaccaaata gaacgcggtg gtggacgccg
      181 gcaggtatcg gccttgcgtg gtcgacgaca catcggttgc gatacctgag aacggcgcct
      241 tgaccaccgc gtcatcgagc tgccgctgcg cttcctcaac ttgagcctcc gcctgctgat
      301 atgcgggaag ctgcgtggtc ggcgtatcgg cactgccgtt gagtcgtgcc aactggactt
      361 gggcctgatg ctgcagcgat tgcagtttcg cggtatcggc ctgcaaggcg gcattggcct
      421 ggtcataggt ggcctgtgcc gtggtgccgt tattgagcaa gagcttggtt cggttgaaat
      481 tgatgctgtc gagattcacc tgtgcctgct gcgcctgcgc atcgctcagc atacgttgat
      541 aatcgacttt catcgcgtcc agcgatagcg cggcttgcgc cagattggcc ctggcattgt
      601 cgagcgcgat ctggaactga cgcggattta agcgaaacag aatctgtccc gccgcgaccc
      661 gctcgttgtt gacgacatcg acgctttgca cggtacccga gacgtcggtc gagatgccga
      721 ccttgtcggc gttcacgtac gcgtcgtcgg tggacatgat ctgtccgcca atgacatacc
      781 aataggtggc gccgatcagt acgagcggca gcagcgcaaa cagaccccag cgcagccagc
      841 gccgccgcag tgtcggctgt ctcgccctgg cgtcatcgtg gggctgcgtc tccggcgact
      901 cgaccagtgg cagttcggga gtttcgggtg cctgcggtga tcccggcgcg cgggaaggcg
      961 ccgatggcgt tggcgtgaga gttcgttgtt gagccattcc gctgttcccg ccgagcggcg
     1021 gtccgcttta caagccatct gaagcgatcg cagcgggcta acccacaatg gcagcaatgt
     1081 ttccatggcg cgcgcagcca tcgtggctcc gtcaccgaag tttctttcat tgcgtgttag
     1141 ggcggctgtc gcgcgcgctc gctgactggt gccaggaaat ctcatctggc tgagtcggaa
     1201 tgttaccaaa gcccggaggg ccggatccta atcaacaatg gagcggtcga accggaaggc
     1261 cggccatgtg cgcgagtacg tcatcttgct cgcggcgatg cagcgcgcct tggaatgacc
     1321 ttcagtatga cctgatgagg agcagctcag gcgactgata gctggtccga gggatagata
     1381 taggtgaatc aaaccagacg ttgtggaatg agcggcgcga gatgactcct cgcgcccaag
     1441 agccggattt ggaacaacga ccgcgcggtt gggcaacccg ccggcgaacg gactggtggt
     1501 agaggttctg gtttccgccc atgggtaatg tcaggtatgt gacgctcgtt cacctccact
     1561 ctcggctgcg gcggtgacag aacatgcatc gaagcaagca tgagcaatgc ggcataatcc
     1621 tggcgagcca aaaaaattcg cagctgccgg aaccgactta gacgtcgagt tttacgtctg
     1681 tagtgcaaga ttggaagagg ttacaaatga acaagatgat gtacgtggcc gtggcggccc
     1741 tttggcttgc cggaacatcg caaatggcac tggcgcaaaa cggatccgtg ggtgggccta
     1801 atggtaaccc ggcctacaac gcgggtc
//
LOCUS       DATAVD010001469         2695 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2933010, whole genome shotgun sequence.
ACCESSION   DATAVD010001469 DATAVD010000000
VERSION     DATAVD010001469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2695
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2933010"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(84..518)
                     /locus_tag="VHX39_28150"
     CDS             complement(84..518)
                     /locus_tag="VHX39_28150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HEX3995065.1"
                     /translation="MNNLYGLLKALHVLCAVVWVGGMLFAYVVLRPSLSVLEPPQRIA
                     LHSQIFRRFFLIIWHVMPLILLTGFIMIFAVFGGMADVAWPVHVMLLLGLVMSAIFLA
                     IFFGPYRTFRAAPGPVPLDSIRKLIGLNLLLGVVTIVIAAFG"
     gene            594..1787
                     /locus_tag="VHX39_28155"
     CDS             594..1787
                     /locus_tag="VHX39_28155"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3995066.1"
                     /translation="MTTPLAAITVLDFGQIYQGPYATFLMAKAGANVIKIEPPRGEPL
                     RRRVIATGGDTTLPMAMLNANKKGVTLNLKSERGKELLKQMVRRADVLLENFSPGTMD
                     GLGVGYSVLKTINPKLIYATGTGFGISGPDRDNLAMDFTIQAASGIMSITGDPSGPPM
                     KAGPTLVDFMGGVHLYAGVITALYQRSVTGEGQLVEVAMQETVYPSLASSYDYYRRTG
                     NPPPRAGNRQAGLSSAPYNAFQTMDGHVAIHVVTEEHWPNLLRAMGREELAGDPRFKS
                     HPDRAANMEATEAVVSAWTSTRTKTEVAATLKRFKVPCAPVRNAIEVMNDAHMHARGM
                     LQHVDHPSLGDVVLPNSPLRLHGADRMEAIPSPSLGQHNLEIYGEWLGLGADGVAALQ
                     RDGAI"
     gene            complement(1764..>2695)
                     /locus_tag="VHX39_28160"
     CDS             complement(1764..>2695)
                     /locus_tag="VHX39_28160"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HEX3995067.1"
                     /translation="PGMTAPADRVLSYEALRNLQGRSNTRGALRLGIHAAGLIATGWW
                     VAVASGWLTVPAVFVLGLVQVALFAPAHETLHQTAFASRRANAVVGWLTSAPSLLNAQ
                     FYTAFHLAHHRHTQIPGLDPELISSPPDTVWGYVARILGWPFWLLRLLVVFDSWRGDL
                     SRYPYITAAVAPAIIRSVRAMSLMMVGGSIGSALLFGWTAPFLFWIGPQLLGQPPLRA
                     YLLAEHTGCTHDRDGLTNTRTTLTNGLVRLLMWNMPFHAEHHMYPSIPFHRLPAAHIA
                     IRTRLGFVQPGYVRWNFSFIRSLLRRSDRSIAL"
BASE COUNT          622 a          845 c          776 g          452 t
ORIGIN      
        1 ggccttcgcc tcttcctcgc cggccaggct gaatgcagcc atttcaggat cccagtttga
       61 tcggtccacc atgccccgct cctttaacca aatgccgcga tgacgattgt tacaacacca
      121 agcagcaggt tcaatccaat caacttgcga attgagtcaa gcgggaccgg cccaggggca
      181 gctcggaatg tccgatacgg gccaaagaag attgccagga agatcgcgga catcaccaaa
      241 cccagcagca gcatcacgtg cacgggccag gcaacatccg ccatgccacc gaacacagca
      301 aaaatcatga taaagccggt tagcagtatc agcggcatca cgtgccagat aatcaggaaa
      361 aaccgccgga aaatctggct gtgcagcgcg atgcgctgtg gcggctccaa caccgacaag
      421 ctcggccgca acacgacgta ggcgaacaac atgcctccga cccacacgac cgcacacaga
      481 acatgcaagg ccttcagaag cccgtacaga ttgttcaatt tccgttccct tccctgttcg
      541 ccagccgcgc cggaacgctc tatcctgccg gccgaacgac aacgaggtcc agcatgacga
      601 ctcccttggc ggccatcacg gtgctcgatt tcggccagat ctatcaaggg ccctacgcca
      661 cgttcctgat ggccaaggcg ggcgccaacg tgatcaagat cgagccaccc aggggcgagc
      721 cgctccgccg ccgcgttatt gcaaccggag gcgacaccac gttgccgatg gccatgctca
      781 atgccaacaa gaaaggcgtg actcttaacc tgaaatcgga acgtggcaaa gagttgctga
      841 aacaaatggt ccgccgggcc gacgtgctct tggagaactt ttcgcccggc accatggacg
      901 gtctcggtgt cggttattcg gtgctgaaga cgatcaaccc gaagctgatt tacgccaccg
      961 gcaccggttt cggtatctcc ggaccggatc gagacaatct cgcgatggat ttcaccattc
     1021 aggctgcgtc cggcatcatg agcatcaccg gcgacccatc gggcccaccg atgaaggcgg
     1081 gaccgaccct ggtcgatttc atgggcgggg tgcaccttta cgctggcgtg atcaccgcgc
     1141 tttatcaacg ttcggtcacc ggcgaaggcc agttggtcga agtggcgatg caggagactg
     1201 tctatccctc gctcgcctcc agctacgatt actaccgacg caccggcaat ccgccgccgc
     1261 gcgccggcaa tcgtcaggct ggcctgagca gcgccccgta caacgcgttt cagacaatgg
     1321 atggccacgt cgcaattcat gtcgtcaccg aagagcattg gcccaacctg ttacgtgcca
     1381 tgggtcgcga ggaattggcg ggcgatcctc gcttcaaatc ccaccctgac cgggccgcaa
     1441 atatggaagc gacagaagcg gtcgtttctg catggacctc gacccggacc aagaccgagg
     1501 tcgccgcgac gctgaaacgc ttcaaagtgc cctgcgcccc ggtacgcaat gcaattgagg
     1561 tcatgaacga tgctcacatg catgcgcgtg gcatgctgca acacgtcgat catccgtcac
     1621 tgggcgatgt ggtcctgccc aactcgccat tgaggctgca tggtgcggac cggatggaag
     1681 caatcccaag tccatcgctc ggtcagcata atttggagat ttacggcgag tggctcggtc
     1741 tcggtgccga cggagtcgca gcgctacagc gcgatggagc gatctgagcg acgcaacaga
     1801 ctgcgaatga aagaaaagtt ccatcgcaca tagcccggct gcacgaagcc aagccgggtc
     1861 cgaattgcta tgtgggccgc cggcaaacgg tgaaatggga tcgacgggta catatgatgt
     1921 tcggcatgga acggcatgtt ccacatcagc aaccgcacca aaccattggt caacgtggtg
     1981 cgtgtatttg tcagcccgtc acgatcatgc gtgcagccag tatgctcggc gagcaaatag
     2041 gcgcgcaaag gcggctgacc caggagctgc ggtccgatcc agaacaagaa tggtgccgtc
     2101 caaccaaaga gcaacgcgga cccgatcgag ccgcccacca tcataaggct catcgcccgc
     2161 acactgcgaa tgatcgcggg cgccaccgca gcggtgatgt agggataccg gcttaaatcg
     2221 ccacgccagc tgtcaaatac gaccagcagt cgcaaaagcc agaacggcca tcccagaatc
     2281 cgggcgacat aaccccaaac cgtgtccggc ggcgacgaaa tcagttccgg atccagcccg
     2341 ggaatttgtg tatggcggtg atgggccagg tgaaacgccg tatagaactg tgcgttcagc
     2401 aacgacggcg ccgaggtcag ccagccgacg accgcgttgg cgcggcgtga ggcaaacgcg
     2461 gtctgatgca atgtctcgtg cgccggagca aacagggcaa cctgcaccag gccaagcacg
     2521 aagacggccg gcaccgtcag ccagccactg gcgaccgcga cccaccatcc ggtcgcgatc
     2581 agaccagccg cgtggatacc gaggcgaagc gcgccgcgtg tgtttgaacg gccttgcagg
     2641 ttgcgtaacg cctcgtagct caggacccgg tcggcagggg ctgtcatccc aggca
//
LOCUS       DATAVD010001470         9258 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3678424, whole genome shotgun sequence.
ACCESSION   DATAVD010001470 DATAVD010000000
VERSION     DATAVD010001470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9258
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3678424"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            51..554
                     /locus_tag="VHX39_28165"
     CDS             51..554
                     /locus_tag="VHX39_28165"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007396448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEX3995068.1"
                     /translation="MDRDGLEAFAAAGRANPGRRGTNAVRTISVGQFRTLSYVGDHKP
                     VVVDEPLHLFGENTAPAPGEIVLSALGGCLAVGITAVATHRQVKLSRLEVKIEGDIGN
                     AAAWGAGGAEMQPAQMGFQHLRVKVLVEGDASRAELDDIVRHANRFSPVANTMRNPIA
                     LDIALGD"
     gene            618..1802
                     /locus_tag="VHX39_28170"
     CDS             618..1802
                     /locus_tag="VHX39_28170"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019087098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3995069.1"
                     /translation="MTSLNARPALSVAIQSNADILERTTAIANGPLRAKATQIDHEGY
                     YPIDIIAELGRAGALGAHLEVGGGRADVAIAAMQAASRVCGATGFLMWAHAVCGLYLE
                     QSGNVALSGSVLADHAAGRRFGGTALSNPMKALAGIEPMALRAERVAGGYLVSGSLPW
                     VSHVGPGQYCGAMAGVQRPDGTPSHEIMFILRCDERVALRPCPQFSGMEGTSTWGIRL
                     DNYFVDQDDMVADPARPLIQRIRGVFILLQAGMGLGVIQGSIDLMRDIESTHGHVNRF
                     LTDRPDELQGEFEALAEHVAALARTPYDGSRDYLIDVLDARIQCSEMALRASQSALLH
                     QGARGYLATSAPQRRVREAHFVAIVTPAVKHLRWEIDRLLREEIPAAAVAMRTPDREL
                     AA"
     gene            1799..1996
                     /locus_tag="VHX39_28175"
                     /pseudo
     CDS             1799..1996
                     /locus_tag="VHX39_28175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013436118.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
     gene            2069..3139
                     /locus_tag="VHX39_28180"
     CDS             2069..3139
                     /locus_tag="VHX39_28180"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3995070.1"
                     /translation="MGAGLAGRATAEALRELDPALPITLVTACSGDVYYKPELSVAFA
                     RGLSPETLCREQGAAMARRLNLRLLDCAFAIGVSPATSSLRTTRGTLRYSHLVLAQGA
                     RPALPAALPASVAWRVNDLQGWSGLHQRLRGGPKRIAIVGGGMVGCELAEDFVQAGHA
                     VTLLDRNAGPLAGLLPTEASQRLRRRLEAAGIRVIAPVEVREARRDAEGVLITTECGL
                     SVEADELVAATGLTTDTRLARSAGLLFNRGIAIDASTLETSAKGIYALGDCISIDGVP
                     CRFIEPIARQAAAIASHILGRRTEGYAHRAPVVRLKTRSMPLALHGVPHAGGVWRTVR
                     DDADRFEMEQWFAGKLHCRLAA"
     gene            3196..4545
                     /locus_tag="VHX39_28185"
     CDS             3196..4545
                     /locus_tag="VHX39_28185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CmpA/NrtA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX3995071.1"
                     /translation="MATRNNSYRPFDPAVGCSCGQHPSQGAHDGTGVDAFVEAAAVRA
                     LFPRYATRRRFLAAVGSATAIAAIHSVLPIADMQAMASEAPGSLEKKSLRIGFIPINC
                     ATPLIMADPMGFYRGEGLDVSLVKSSGWALVRDQVQNGELDASHFLSPMPLAISMGVG
                     STPHPTRVAAIQNTNGQAITLALKHKDNRDPRNWKGFKFAIPFEYSMHNLLLRYYLAE
                     HGIDPDRDVQLRITPPAEMVANLAAGNIDGFLGPDPFNQRAVYDRAGFIHILSKEIWD
                     GHPCCAFGVSQGFVEQNPNTFAALCRAMLKSAAMARDPANLPTIAQAIAPQKYLNQPE
                     TVIRQALTGHFADGLGHVRDVPGRTGFDPMPWYSMATWMLTQMRRWGYIKQDIDYAAI
                     AEQVFMLTDARRLMQQLGEPVDPAALRSGYRPVQVMGRTFDPAQPRAYLDSFPIKRT"
     gene            4561..5427
                     /gene="ntrB"
                     /locus_tag="VHX39_28190"
     CDS             4561..5427
                     /gene="ntrB"
                     /locus_tag="VHX39_28190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010516947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015414 - ABC-type nitrate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015706 - nitrate transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate ABC transporter permease"
                     /protein_id="HEX3995072.1"
                     /translation="METRLRLRAALLSLLLLAGSLVTWQVATRPPAAMGSGTMTAEQA
                     EYARLMGDSPDTGTPVVNHGFPTPAEFAAVALARVENPFYDNGPNDKGIGIQLAYSLG
                     RVAVGFLIAMVVAVPIGFAIGMSPLLYRALDPFIQVLKPISPLAWMPIALYTIRDSSA
                     CGIFVIFICSVWPMLINTAFGVAGIRREWLNVARTLEVKRLRLAFFVILPAAAPTIIT
                     GMRISMGIAWLVIVAAEMLIGGTGIGYFVWNQWNNLSLADVIFAVLLIGLVGMALDNL
                     FALLQKKVTYAQ"
     gene            5429..6358
                     /locus_tag="VHX39_28195"
     CDS             5429..6358
                     /locus_tag="VHX39_28195"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010516945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3995073.1"
                     /translation="MLSGKTIPSAPHAGGPFLQVHSLGKRYQPVAAPVFENVSFSVDR
                     GEFVCIIGHSGCGKSTILNTLAGLESASEGSIVMDGREVSGPSLDRGVVFQGHALLPW
                     LTVAQNIAFAVRSRHPGWSREQVAKHGKHFIGMVGLSTAAGKKPAELSGGMRQRVGIA
                     RAFAIEPKVLLLDEPFGALDALTRGIIQDELLRICAETQQTVFMITHDVDEAILLADR
                     ILLMSNGPRAAIAEIVVNTMPRSRVREAMHHDPQFYRIRNHLVDFLVRRSKAIQATAP
                     QAAESPTRVPVVSRPGLPDAARPMEAPRLAVVS"
     gene            6407..6856
                     /gene="cynS"
                     /locus_tag="VHX39_28200"
     CDS             6407..6856
                     /gene="cynS"
                     /locus_tag="VHX39_28200"
                     /EC_number="4.2.1.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007116985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008824 - cyanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009636 - response to toxic substance
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanase"
                     /protein_id="HEX3995074.1"
                     /translation="MIADRNEVTQMIRAMKVQKGLTWAQVAGAVGLSKEWVTAGCLGQ
                     MTFTKAQAEIVGELFGLSDEACAWLQVVPYKGSLPTTVPADPLLYRWYEVVSVYGTTI
                     KELIHEEFGDGIMSAIDFSMDIQREPDPKGDRVHVVMSGKFLPYKSY"
     gene            7040..7282
                     /locus_tag="VHX39_28205"
     CDS             7040..7282
                     /locus_tag="VHX39_28205"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX3995075.1"
                     /translation="MVPKPNLLCDDRLATDGIRPSGPIPTEKMPTLFEPFTRGSMQGL
                     GLGLYICQEIAKAHGGLVEATSTPNETRFTFRTPLE"
     gene            7946..8923
                     /locus_tag="VHX39_28210"
     CDS             7946..8923
                     /locus_tag="VHX39_28210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010504217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3995076.1"
                     /translation="MQPATDLLPGRLLREPGPPNIVEGFRGVQIDDAGLSKVVSPDAP
                     LLTLYEGTLHGEGPAWQATHDRLVWSDVPNRRLLGWYPDGRVEVLIDGTWFMNGNAVE
                     ADGTLVHCEHGRRCISRGGDYDRAPEPIVTRYQGKRINSPNDVAVAPDGTIWFTDPAF
                     GIIMPNQGALAEPELDHRSVYRFDPQTGKLTRMADFEQPNGLAFTADGATFYVSDTSL
                     SLGEVPGHKAGTKHEIIAFDVGEGGTLSNRRFFCHTDHGYPDGFAVDVRGWVWTSAAD
                     GVHIWSADRRKLGFVPTPTVVSNCTFGGLDGRRLFIAATQYLLAIDLTG"
     gene            complement(8913..>9258)
                     /locus_tag="VHX39_28215"
     CDS             complement(8913..>9258)
                     /locus_tag="VHX39_28215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011930560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glyoxalase"
                     /protein_id="HEX3995077.1"
                     /translation="TGIMGIDHSAISVGDVSSSRRFYASHGLNEAGASVNHGAPQDAL
                     DGLDGVEVDVIPMNPAGRPPHVELLGYRHPVGRAFRTLAANDIAATRIVWRSDGNALI
                     RDPDGHLHQLSR"
BASE COUNT         1631 a         2982 c         3022 g         1623 t
ORIGIN      
        1 tgaacaccgt tgaaagcctg accgtcgacc cactgacacc gctgcgccag atcgaccgtg
       61 acggccttga agcgttcgct gccgccggcc gagccaaccc ggggcgccgc ggcaccaatg
      121 ccgtgcgcac gatcagcgtc ggccagttcc ggaccctgag ctatgtcggc gatcacaagc
      181 ccgtcgtggt cgatgaaccg ctgcacctct tcggggagaa caccgctccg gctcccggcg
      241 aaatcgtgct gtcggcgctg ggcggctgcc tggctgtcgg catcaccgcc gtggcaacgc
      301 atcgccaggt gaagctgtcg cgacttgaag tcaagatcga aggtgacatc ggcaacgccg
      361 ctgcctgggg cgccggcggc gccgagatgc aaccggcgca aatgggcttc cagcatctcc
      421 gggtgaaggt gctcgtcgag ggcgacgcca gccgcgccga actggacgac atcgtccgcc
      481 atgcaaatcg tttctcgccc gtcgccaaca cgatgcgcaa cccgatcgcg ttagacatcg
      541 cgctcgggga ctgagagcag cgggtggggc cgccaccgcg gccccgccgt tccgtgcatc
      601 gtgaaccgga gcttgccatg accagcttga atgcccgccc tgccctgtca gtggcgatcc
      661 agagcaacgc agacatcctt gaacggacca cggcgatcgc caatggcccg cttcgcgcca
      721 aagccacgca gatcgaccat gagggttatt acccgatcga catcatcgcc gagcttgggc
      781 gggcgggcgc gctcggtgcg cacctcgagg ttggcggagg ccgggccgac gtcgcgatcg
      841 ccgcaatgca ggcagcaagc cgggtttgcg gtgccaccgg atttctgatg tgggcgcatg
      901 ccgtctgcgg actgtacctg gagcaatccg gaaacgtcgc gctgtccggt tcggtgctgg
      961 ctgaccacgc cgccggacgg cgcttcgggg gcactgcgct gtccaacccg atgaaggcgc
     1021 tggccggcat cgaaccaatg gcgctgcggg cggagagggt agccggcggc tacctcgtca
     1081 gcgggtcgct gccatgggtc agccacgtcg ggccgggcca gtattgcggc gccatggcgg
     1141 gcgtccagcg cccggacggc accccatcac acgagatcat gttcatcctg cgttgcgacg
     1201 agcgggtcgc actgcggccc tgcccacagt tctctggcat ggagggcacc agcacctggg
     1261 gcatccgcct cgacaattac ttcgtcgacc aggacgacat ggtggccgat ccggcgaggc
     1321 cgctgatcca gcgcatccgc ggcgtcttta tcctgctgca agccggcatg gggcttggcg
     1381 tcatccaggg cagcatcgac ctgatgcggg atatcgagtc gacccatggg cacgtcaacc
     1441 gcttcctgac tgaccggccc gacgaactgc agggtgagtt cgaggcgctg gccgaacatg
     1501 tcgcagcact ggcccgcacc ccatacgacg gcagccgcga ttacctgatc gacgtgctgg
     1561 atgcccggat tcagtgctcg gaaatggctc tgcgggcgtc acagtcagcg ctgctgcacc
     1621 agggtgcgcg cggctacctg gccacctcgg caccgcagcg acgggtgcgc gaggcgcact
     1681 tcgttgctat cgttacgccc gcggtcaagc acctccgctg ggagatcgac cggctgctgc
     1741 gtgaggagat ccctgccgcg gcggttgcga tgcgaacccc ggatcgggag ttggcggcat
     1801 gagcggcgct gtcccggccg ggaacgcggc cgataccgag ggctggcgcc agtatatctg
     1861 ccgggcctgc gggctggttt acgacgaagc agccggtgac cccgacggcg gcctggcgcc
     1921 gggcacgcgg ttcgaggaca tccccgacga ctgggagtgc ccgctgtgcg gcgtccgtaa
     1981 gacggacttc gagttgaagg ttgcccaagc cccggttacc accgtcgcct cagcagtccg
     2041 ggcgccgcac ggtctgggcg tggtcatagt gggcgccgga ctggccggac gggccaccgc
     2101 cgaggcgcta cgggaacttg accccgcact gcccatcacg ctggtgaccg cctgtagcgg
     2161 cgacgtctac tacaagcccg aactgtcggt ggcgttcgct cgcggcctgt cccctgagac
     2221 gctgtgtcgc gagcagggcg ccgcaatggc ccggcggctg aacctgcgcc tgctcgactg
     2281 cgctttcgca atcggcgtgt cgccggcaac gagcagtttg cgtaccacac gcggcacact
     2341 gcgctactcc cacctcgtcc tggcgcaggg ggccaggccc gcgctgccgg cggcgcttcc
     2401 tgccagcgtc gcgtggcggg tgaacgacct gcaaggctgg tccgggctgc atcagcggct
     2461 gcggggcggc ccgaagcgga tcgcaattgt gggcggcggt atggtcggct gcgaactggc
     2521 ggaggacttt gtccaggctg gccacgccgt cacgctgctg gaccgcaacg cggggccgct
     2581 tgccgggctg ctgccgaccg aggcttcgca gcggctgcgt cgccggctgg aggctgccgg
     2641 catccgcgtc atcgccccgg tcgaggtccg agaagcccgc cgtgacgcgg aaggcgtgct
     2701 gatcaccacg gaatgcggcc tgtcggtcga ggccgacgaa ctggtcgcgg cgaccggact
     2761 cacgaccgac acaaggctcg cccgcagcgc aggtcttttg ttcaaccgcg gaatcgccat
     2821 cgatgccagc accttggaga ccagcgccaa aggtatctat gcgctcggcg actgcatttc
     2881 gatcgacggg gtgccctgcc gcttcatcga gccgattgcc cggcaggccg cggccatcgc
     2941 cagccacatc cttggccgcc ggaccgaggg ctacgctcac agggcaccgg tcgtgcggct
     3001 gaaaacccgc tcgatgccgc tcgccctgca cggcgtgccg cacgccggcg gcgtgtggcg
     3061 cacggtgcga gacgacgcgg accgcttcga gatggagcag tggttcgcag gcaaactgca
     3121 ctgccggctt gccgcctaga cggcaacaca gctgcgaccc gctttcaaca gcctgctttc
     3181 aaaggagccc gtgagatggc gacgcgaaac aacagctacc gcccgttcga cccggccgtc
     3241 gggtgcagtt gcggccaaca cccaagccaa ggcgcgcatg acggcacggg cgtggacgcc
     3301 tttgtcgagg cggccgcggt ccgcgcgctg ttcccgaggt acgctacgcg ccgccgcttc
     3361 cttgcggccg tgggttcggc cacggcgata gcggccatcc acagtgtgct gccgatcgcc
     3421 gatatgcagg ccatggcatc cgaggcaccc gggtcgctgg aaaagaagag cctgcggatt
     3481 ggctttatcc cgatcaactg cgcgacgcca ctgatcatgg cggatccaat gggcttttat
     3541 cgtggcgaag gcttggacgt gtcactggtc aagtcctccg gctgggcgct ggtgcgcgac
     3601 caggtgcaga acggcgaact ggacgcctca cactttctgt cgccgatgcc gctggccatc
     3661 agcatgggcg tcggctcgac cccgcatccg acgcgcgttg cagcaatcca gaacaccaac
     3721 ggccaggcga tcacgctggc gctgaagcac aaggacaacc gagacccgcg gaactggaag
     3781 ggtttcaagt tcgcaattcc gttcgagtat tcgatgcaca atctgctgct gcgctactat
     3841 ctggctgagc acgggatcga cccggacagg gacgtgcaac tgcggatcac accgccggcc
     3901 gagatggtcg ccaacctggc cgccggcaac atcgacgggt ttctcgggcc ggatccgttc
     3961 aatcagcgcg ccgtctacga tcgggccggc tttatccaca tcctgtcgaa ggagatctgg
     4021 gacggccacc cgtgctgcgc gttcggcgtg tcgcagggct tcgtcgagca gaatcccaac
     4081 accttcgcgg cactgtgccg agcgatgctg aagtccgcgg cgatggcgcg cgatccggcc
     4141 aatctgccga ccatcgccca ggccatcgca ccacagaaat acctgaacca gcccgagacc
     4201 gtgatccgtc aggcgctgac cggacatttc gccgacgggt tgggccacgt gcgcgatgtg
     4261 ccgggcagga ccggcttcga cccaatgccc tggtactcga tggcgacctg gatgctgacc
     4321 cagatgcgac gatggggata catcaagcag gacatcgact acgccgccat cgccgaacag
     4381 gtgttcatgc tgaccgacgc ccgccgcctg atgcaacagc tcggcgagcc ggtggatcca
     4441 gccgccctga ggtccggcta ccggccggtc caggtgatgg gccggacctt cgatcccgcc
     4501 cagccgcgag cctacctcga cagcttcccg atcaagcgta cctgacaagg agggcctttc
     4561 atggaaaccc gtttacgcct gagggcggcc ctgctgtccc tgctattact ggccgggtcc
     4621 ctcgttactt ggcaggtcgc cactcggcca ccggccgcga tggggtccgg tacgatgacc
     4681 gcggaacagg ccgaatacgc gaggctgatg ggcgatagcc ccgacaccgg gacgcccgtc
     4741 gtgaaccacg gctttccgac ccctgccgag ttcgctgctg tcgcgttggc gcgggtggag
     4801 aacccattct acgacaatgg ccccaacgac aagggcatcg gcatccagct cgcgtattcg
     4861 ctgggccgcg tcgcggtagg ctttctcatc gctatggtgg tcgccgtccc tatcggtttt
     4921 gccatcggca tgtcgccgtt gttgtaccgg gcgctcgacc ccttcatcca ggtgctcaaa
     4981 ccgatctcgc cgctcgcctg gatgccgatc gcactctaca cgatccgcga ttcctcagcg
     5041 tgcggcatat tcgtcatctt catctgctcg gtctggccga tgctgatcaa cactgccttc
     5101 ggcgtggccg gcatccgccg cgaatggctc aacgtcgccc gcacgctgga ggtcaagcgg
     5161 ctgcgcctgg cgtttttcgt catcctgcct gccgccgcgc ccaccatcat caccggcatg
     5221 cggatttcca tgggcatcgc gtggctcgtc atcgtggccg ccgagatgct gatcggcggc
     5281 accggcatcg gctacttcgt ctggaaccag tggaacaacc tttccctggc cgacgtgatc
     5341 ttcgcggtcc tgctcatcgg cctggttggc atggcgctgg acaacctgtt cgcactgctg
     5401 cagaaaaagg tgacttatgc gcaataaaat gctcagcggc aaaactatcc cgtccgcgcc
     5461 gcacgccggc ggcccgttcc ttcaggtgca tagccttggc aagcgctacc agcccgttgc
     5521 cgcgccggtc ttcgagaacg tgagcttctc ggtcgaccgt ggcgagttcg tctgcatcat
     5581 cggccattca ggctgcggca agagcaccat cctgaacacg ctggccgggc tggagtccgc
     5641 cagcgagggc agcatcgtga tggacggccg tgaagtttcg ggtcccagcc tggaccgcgg
     5701 cgtggtgttc cagggccacg cgctgctgcc ctggctgact gtggcgcaga acatcgcgtt
     5761 tgccgttcgc tcccgccatc caggatggag ccgtgagcaa gtggcgaagc acggcaagca
     5821 tttcatcggc atggtcggac tgtcgaccgc ggcgggcaag aagccggcgg aactgtcggg
     5881 cggcatgcgc cagcgggtcg gcatcgcccg agcgttcgcc atcgagccga aagtgctgct
     5941 gctggatgag ccgttcggtg cgctggacgc actgacccgt ggcatcatcc aggacgaact
     6001 gctgcgtatc tgcgccgaga cgcagcagac cgtcttcatg atcacccacg acgtcgatga
     6061 ggcgatcctg ctggccgacc gtattctgct gatgagcaac ggcccgcggg cggccatcgc
     6121 cgagattgtg gtgaacacga tgccgcgcag ccgggtgcgc gaggccatgc accacgaccc
     6181 gcagttctat cggatccgga accacctcgt ggatttcctc gtccgccgtt ccaaggcgat
     6241 ccaggccact gctccccagg ctgccgagtc gcccacccgc gtgccggttg tcagccgtcc
     6301 aggcctcccg gatgccgccc gcccgatgga ggcgccgcgt ctcgcggtcg tttcctgatg
     6361 gcatctgccg aaaccattag cacagtcaac agaaggagag tatgaaatga ttgccgacag
     6421 aaatgaagtc acccagatga tccgcgccat gaaggtccag aaaggcctga catgggcgca
     6481 agtcgctggc gcggtcgggc tgagcaagga atgggtgacg gcaggctgcc ttggccagat
     6541 gacgttcacc aaggcgcagg ccgaaatcgt cggcgagctg ttcggcctgt cggacgaagc
     6601 ctgcgcatgg ctgcaggtgg ttccctacaa gggcagtctg ccgacaacgg tgcccgccga
     6661 cccgctgctg taccggtggt atgaggtcgt gtcggtctac gggacgacca tcaaggaact
     6721 gatccacgaa gaatttggcg acggcatcat gtcggcgatc gacttttcga tggacatcca
     6781 gcgcgagccc gatccgaagg gcgaccgagt gcatgtcgtg atgtccggca agttcctgcc
     6841 gtacaagtcc tactgaccgg ccaataacgc cccgcctcgc atgccgcggg gtggggcgga
     6901 ttgcatccct ggaaccacca atgcaataga tggcaccgcc aacttgtcgt ccatgtaata
     6961 ttggaaggcg cgatgggatt agtgggtcac ggaggggcgt gttgatgggc gttggtgcac
     7021 tcgacagacg aagggcgaga tggtccccaa acccaatctg ctatgcgatg accgtctggc
     7081 gacggatgga atccggccgt ccggcccgat cccaacggaa aagatgccaa ccctttttga
     7141 gcctttcacc cgtggcagca tgcaaggcct ggggctgggc ttgtatatct gtcaggagat
     7201 tgcaaaggct cacggtggcc tcgtagaggc gacctcaacg ccaaacgaga cgcggtttac
     7261 cttccgaacg cctctggaat agaaccacat ctctgtgcag ggcagcggtg gttaccctgg
     7321 cgattgggcg gtctttgacg aatgctaaac ccaatgagca tcatgcaccc tcagcccgag
     7381 cgtgaagtca acggctggag aaaccgtgaa tgcaagccag agcggattgc tcgactcatc
     7441 gccgcccttg atagcgggaa catgacggag gcggcggcct ctctgatgaa gttgttggcg
     7501 tcgctggacg agaaccgatc aagcaggcgt cagcttaagt cttggaaccc ttaggtcatc
     7561 cggtaattat tcacggtctg agcgtgcatt tgtagggatg gatcgcccca tgatcattgt
     7621 tgcggatgac gaacccttcg tccgcatggt cgttgcggac agtttgagga agactaaggg
     7681 agatggaaga ggacgcttcg aacgtcagtg gtcgacgcta cgaggactat tctccgttca
     7741 gacgacagct cgacaccggg acatcgcgtc accggctgac ctggatgaaa tccggctgcg
     7801 ccataggggg gggcttgcca tgagagagcg tggtcctttc ggacacctgg aagcaatgtg
     7861 gaccgtttag atgcctgcga gaccggcttg ctggtcgcga taaatcgcct aattcaatca
     7921 cgcgaattcc aacgggagac gtaacatgca gccagccacc gatctgcttc caggacgtct
     7981 gctgcgcgag ccgggcccgc ccaatatcgt ggagggcttt cgtggcgttc agattgacga
     8041 tgcagggcta tcgaaggtgg tctcgccgga tgcgccgctc ctgacgctgt atgagggaac
     8101 gctccatggt gaaggccccg cgtggcaggc cacgcatgat cggcttgtct ggtcggacgt
     8161 tcccaatcgg cggttgctgg gctggtatcc cgatggtcgt gtcgaggtct tgatcgacgg
     8221 cacctggttc atgaacggca atgctgtcga ggcggacggc acgctcgtcc actgcgagca
     8281 cggccggcgc tgcatcagca ggggcggcga ttatgatcgg gcgcccgaac ccatcgtgac
     8341 ccgttaccag ggcaagcgga tcaattcgcc caacgacgtt gcggtcgcgc ccgacgggac
     8401 gatctggttc accgatccgg catttgggat catcatgccc aaccagggcg cgctcgccga
     8461 gcccgaactc gatcatcgca gcgtgtatcg ttttgatcca cagaccggca aactgacccg
     8521 gatggcggat ttcgagcaac ccaacggtct cgccttcacc gcggatggcg cgacgttcta
     8581 tgtgtccgac acctcactgt cgcttggcga ggtgcccgga cataaagccg ggacgaagca
     8641 cgagatcatc gcattcgacg tgggcgaggg cggaacgctc tccaaccggc ggttcttctg
     8701 ccacaccgac catggctatc ccgacggatt tgcggtcgat gtgcgtggct gggtgtggac
     8761 gagcgcggcg gacggtgtcc acatctggtc ggcggatcgg cgcaagctgg gcttcgtgcc
     8821 aacaccgacg gtcgtctcga actgtacctt cgggggcttg gatggacggc gattgttcat
     8881 cgccgcgaca cagtatctgc tcgcgatcga tctcaccggc tgagctggtg aaggtgcccg
     8941 tcgggatcgc ggatgagcgc attgccatcc gatcgccaga cgatccgggt ggcggcgatg
     9001 tcgttggcgg ccagagtacg aaatgcacgg ccgacggggt ggcgatagcc gagaagctcg
     9061 acatgtggcg gcctgccggc agggttcatc ggtatgacat cgacctcgac gccatcgagg
     9121 ccgtcgagcg cgtcctgtgg cgcgccgtga ttgaccgacg caccggcctc gttcagcccg
     9181 tggctggcat agaagcgtcg gctggacgag acatcgccga ccgagatcgc gctatggtcg
     9241 atccccatga tgccggtg
//
LOCUS       DATAVD010001471         4202 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1629123, whole genome shotgun sequence.
ACCESSION   DATAVD010001471 DATAVD010000000
VERSION     DATAVD010001471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4202
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1629123"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..224)
                     /locus_tag="VHX39_28220"
     CDS             complement(<1..224)
                     /locus_tag="VHX39_28220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase zinc-binding domain-containing
                     protein"
                     /protein_id="HEX3995078.1"
                     /translation="MRASLEVADIFRAAGPACRATHAGHLSLHQLKVMSAIQHCRTAV
                     LGGHVEACEDCGHWRIAYNSCLMGKFSNGES"
     gene            complement(229..714)
                     /locus_tag="VHX39_28225"
     CDS             complement(229..714)
                     /locus_tag="VHX39_28225"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEX3995079.1"
                     /translation="MAEVAALKVADIDSERMLIRVERGKGGRYRNAMLPADLLTLLRE
                     WWKVGHQQGVMHRDGWLFPGQHAMKPISTRQLHRIVVEAAQAAEITKRVGPHTLRHSF
                     ATHLLEDGVDIRVIQVLLGHAKLDNTAFYTKVATRTVRTVTSPLDKLGMFRTGEIAPT
                     G"
     gene            complement(660..1091)
                     /locus_tag="VHX39_28230"
     CDS             complement(660..1091)
                     /locus_tag="VHX39_28230"
                     /inference="COORDINATES: protein motif:HMM:NF024886.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage integrase N-terminal SAM-like
                     domain-containing protein"
                     /protein_id="HEX3995080.1"
                     /translation="MIDDMNVRRFSRETQRNYIRDVGRFATFLGRSPDSATAEDVRRF
                     QIEQRDLGVPTPTMNSIVSALRFFFTYTIDRPDLARKAIRVPHPRNLPVVLSRDEVAR
                     LLNATTCIKHQAALSRSPIAPVCAWLRSQRSRSPISTASAC"
     gene            1625..1843
                     /locus_tag="VHX39_28235"
     CDS             1625..1843
                     /locus_tag="VHX39_28235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995081.1"
                     /translation="MTWQYPQHATAYRWLAASLGQLGRSEEAEVALEHLQTVAPASFD
                     MYIRHRPRYWEIEHAPLVEGLRKAGWKE"
     gene            complement(1913..2113)
                     /locus_tag="VHX39_28240"
     CDS             complement(1913..2113)
                     /locus_tag="VHX39_28240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995082.1"
                     /translation="MLPQRPVINATFGLMALFSLAVQRRLADHRFEIELSCQKEVAAI
                     ATNKPIEIKGTQFKSQSYREAV"
     gene            2323..2856
                     /locus_tag="VHX39_28245"
     CDS             2323..2856
                     /locus_tag="VHX39_28245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008892240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase family protein"
                     /protein_id="HEX3995083.1"
                     /translation="MLTKSWLLSRWHYQRHGLVLKGRPSDEIWYFAYGSNMHQGTFVG
                     RRGIRPRASRVGRIMGYRLRFNLEGRPKGKAAPANICPDGDQEVWGVLYKITRRDMLR
                     LDSTEGVPGRGYQPTWLSAVDVDGNLLMAIAYMAAGKETDGNPSHRYISLLREGARNH
                     GLPEHWIQFLNSVSHAQ"
     gene            complement(3356..>4202)
                     /locus_tag="VHX39_28250"
     CDS             complement(3356..>4202)
                     /locus_tag="VHX39_28250"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995084.1"
                     /translation="VAEAVIGCSGVYLFIVHMVTADKPFIPIMLFKDRNFAAGLVLMF
                     AIGTILVSSSSLMAPWLQNLANYPVETAGLIMAPRGIGTMAAMMTGGRLAGRLDPRQI
                     MAVGILMLTWSMWEMTTWTPAISQWTIIITIMVQGAGLGLAFLPLQVLAFATLPPHYR
                     TDGASLFSLFRNIGAAVGVSITSSMLAHNIQVLHESIGASVTPFNRALQGGGMISRAW
                     DPIHAHGAAMMDQVVNQQAQISAYIDDYWMMTFITLPSLALLLLLRRPKHSSSVPEKA
                     HAVMD"
BASE COUNT          881 a         1226 c         1252 g          843 t
ORIGIN      
        1 gactccccat tactgaattt gcccataagg cagctgttgt aggcgatccg ccagtggccg
       61 cagtcttcac aggcctcgac atgaccgccc agaaccgccg tgcggcagtg ctggatcgcc
      121 gacatgacct tgagttgatg aaggctcagg tgtccggcat gggtggcccg acaagcgggg
      181 ccggcggcac ggaagatgtc ggcgacctcg agcgaggcgc gcacggcctc aaccggtggg
      241 tgcgatctct ccggtgcgga acatgccgag cttgtcgagc ggactggtca cggtgcgcac
      301 cgttcgggtt gcgaccttgg tgtagaaggc ggtgttgtcc agcttcgcgt gcccgagcaa
      361 gacctggatg acgcggatat caacgccgtc ctcgaggaga tgggtggcga aactgtgccg
      421 taacgtgtgc ggtccgaccc gtttggtgat ctccgcggcc tgtgccgcct cgacgacgat
      481 gcgatggagt tgccgggtgc tgattggctt catcgcgtgc tgtcctggaa acagccaacc
      541 gtcgcgatgc attacgccct gttggtgccc gaccttccac cactcgcgca gcagggtaag
      601 cagatccgct ggaagcatgg cattgcgata ccggccaccc ttgccacgct cgacccggat
      661 cagcatgcgc tcgctgtcga tatcggcgac cttgagcgct gcgacctcag ccacgcgcag
      721 accggcgcaa taggcgaccg agagagagcc gcctgatgct tgatgcaggt ggtcgcgttg
      781 agcagtcgcg cgacctcgtc ccggctcagc accacgggca ggttgcgcgg atgcggcacg
      841 cggatcgcct tgcgtgccag gtcgggccgg tcgatggtgt aggtgaagaa gaaccgcaac
      901 gccgagacga tgctgttcat ggtcggcgtc ggcacgccga gatcgcgctg ctcgatctgg
      961 aagcggcgca cgtcttccgc cgtggcgcta tcgggtgagc gccccaggaa cgttgcgaag
     1021 cgccctacat cgcgaatgta gttgcgctgc gtctcgcgcg agaaccggcg cacgttcata
     1081 tcgtcgatca aacgttggcg tagtgggctg atcgcggtgg cgggacaggg gtcgttcatc
     1141 ggttggctcc tctcggttga aagaagccga aatgctcggt ccgccttgga tcgcgctcaa
     1201 tcgaggcgcg acagccgagc ctctacacgg tcatcaaaac ccgcacccct cccgcgcagc
     1261 gggttcgttc atcggccagc ctcggccgaa agctgcccgg tagctccgcg cccatgcacg
     1321 aacccgcttc gcgggattgg tgctgtggct gcgtcctatc cggcatctga atgatcgatg
     1381 tctgaagcaa agcaaggtcg gggcgctgcc ccaaaccccg ccaggggccg agtccctgga
     1441 cctcgaccct tatgctcgtt ttccataagg tcttgagcat cgcgcagtcg cttattgagc
     1501 atggagttcc cttcaacctg agaggaactt ccgatgcctg tttcatctat cgaacgcccg
     1561 gtcagcgcgt tcaggcaacg catgctcgaa gaactatgcc gttgcgctga caacggcgcg
     1621 gcgcgtgacc tggcaatatc cgcagcacgc gaccgcatat cgttggctcg cggcgtccct
     1681 gggccaactc ggccgctcgg aggaggcaga ggttgcgctg gaacatcttc agacagttgc
     1741 accagcctca ttcgatatgt acatacggca tcgaccgcgg tactgggaga tcgagcacgc
     1801 gcccctggtc gaggggctgc ggaaggccgg ctggaaggaa tgacaggtca gtcttgtcgg
     1861 cgcgaaaggc cggacatgaa agtaaaacaa tacggcagaa gattctatta ggctaaaccg
     1921 cttcgcggta gctctgtgat ttgaactgcg ttcctttaat ttcgatgggc ttgtttgtgg
     1981 cgatggccgc cacctctttc tggcatgaca gttcgatttc gaaacgatgg tctgccagtc
     2041 gccgctgaac cgctagcgag aagagcgcca tgagaccaaa ggtggcattg attaccggtc
     2101 gctgcggcag cattggtcga gcgtcttctt gactctttgc ggaagagggc gcgaaagaac
     2161 tcatctcggg cgatgcgccc cctgattatt tgcgaacctg taagggtggt gcgccttcgg
     2221 gatttgatcg tcgtttcatg cggctccccc gccctgttcc ccgcattgca ttcgacggcg
     2281 ttggatggca gatagatttg catgcgaatc cgatggcgac ggttgctcac aaaatcctgg
     2341 ctgctgtcgc gctggcatta tcagaggcat gggctcgttc tgaaaggacg accatccgat
     2401 gaaatctggt attttgcata cggctccaat atgcaccagg gaacatttgt cggacggcgt
     2461 ggcatcaggc cgcgcgcctc ccgcgtcgga cgtatcatgg gctatcgact gcggttcaat
     2521 cttgaaggcc gaccgaaggg aaaggctgcg ccggccaaca tctgccccga tggagatcag
     2581 gaagtctggg gtgtcctgta caagatcaca cggcgagaca tgcttcgcct ggattcaact
     2641 gaaggagttc caggtcgtgg ctatcagcct acatggctga gcgcagttga cgtggacggt
     2701 aatctgctga tggctattgc ctatatggct gccggaaagg agaccgatgg taatccttcg
     2761 catcgctaca tctcgttgtt gcgagaaggg gcgcggaacc atggtctgcc cgagcattgg
     2821 atacaattcc tgaatagcgt gagccacgct caatgaaggt cgaaaggaag ttccagcact
     2881 gaattatcga ccgatagctt ttctgatcac cgagaaatat acccactgac aacgatgccg
     2941 agttcaattt cctcaagcgt ttgtacaaca gaagatctgg caaaaatgcg acgaagtacg
     3001 cagtcgacgt gatcgcagat taatctggtt caaactgtca tcgcgacgat cctctacgct
     3061 ctctgcaaat atcgggtgac ggcttctcag aatgggtttc ttgatttcaa ggaacaactg
     3121 gaaacgctgc tcggaaatca agccaaccat cgatctgcca actgacgacg agggaaagtc
     3181 gcgctctcgc catcatcatt acggtggatc aaattcgtca atcggcgatc gccttcaacg
     3241 caacggacta cgacgaccag cgcaccggat catcgctatg gatgcccagt ttacacctgg
     3301 cattagactg aagctgcgcc agcaacaggg gtcgttccga caaatgatcg ctagtctagt
     3361 ccataaccgc gtgcgccttc tccggcaccg atgaggagtg ctttggccgt cgtaacaaca
     3421 acagcagcgc cagcgagggc agcgtgataa aggtcatcat ccaataatcg tcaatatagg
     3481 ctgaaatctg cgcctgttgg ttgaccacct ggtccatcat cgccgcacca tgcgcgtgga
     3541 tcggatccca ggcccgactg atcatcccgc cgccctgaag agctcggttg aatggcgtca
     3601 ccgatgcgcc gatcgactca tgcagcacct gaatgttgtg cgccagcatt gacgacgtaa
     3661 tcgacacgcc gaccgccgcg ccgatattgc ggaacaggct gaacaatgag gcaccatcgg
     3721 tgcggtaatg cggcggcaag gtcgcgaacg ccagcacttg cagcggcagg aacgcaagcc
     3781 cgagtcccgc gccctgcacc atgatcgtta tgatgatcgt ccattgcgag atggcggggg
     3841 tccaggtcgt catctcccac atcgaccagg taagcattaa aataccaact gccattatct
     3901 gccgagggtc caatcgaccg gcaagccggc cacccgtcat catcgccgcc atcgtcccga
     3961 tgccacgcgg ggccatgatc agcccagcgg tctccaccgg atagtttgca agattctgta
     4021 gccacggagc catcaaggac gagctggata ccagaatcgt gccgatcgcg aacatcaata
     4081 ccagaccggc cgcgaagttt cggtccttga acagcatgat gggaatgaac ggcttgtccg
     4141 ccgtcaccat gtggacaatg aacagataga cgccggaaca gccgatcacc gcttccgcga
     4201 ct
//
LOCUS       DATAVD010001472         2273 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2746508, whole genome shotgun sequence.
ACCESSION   DATAVD010001472 DATAVD010000000
VERSION     DATAVD010001472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2746508"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            412..1410
                     /gene="trpS"
                     /locus_tag="VHX39_28255"
     CDS             412..1410
                     /gene="trpS"
                     /locus_tag="VHX39_28255"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEX3995085.1"
                     /translation="MQRIFSGIQPSGIPTLGNYLGALRNWAALQDGHECIYCVVDLHA
                     ITAFQDPKDLTQQTREMAATLLAIGIDTSKHIVFLQSSVRAHAQLAWILNCVARIGWL
                     NRMTQFKDKAGKDRENASAGLYVYPNLMAADILAYHATGVPVGDDQRQHLELANDIAQ
                     KFNFDYGVEFFPTIQPLILGHAARVMSLRDGTKKMSKSDPSDQSRINLNDDADTIALK
                     IRRAKTDPEPLPSEPDGLAHRPEERNLVGIYAELADMTPTVVLREHGGKGFGAFKEVL
                     TALLVEKLTPIAAETTRLLADPTMIDVMLRDGARRAAAIADPIVARAEDLVGFLRV"
     gene            1524..2225
                     /gene="hisG"
                     /locus_tag="VHX39_28260"
     CDS             1524..2225
                     /gene="hisG"
                     /locus_tag="VHX39_28260"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003622236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEX3995086.1"
                     /translation="MTANFAAASLEPETQEPLILALPKGRILAECGPLLARAGIVPAA
                     DYLDESSRRLRFETSDPSLDVVRVRSFDVATFVAFGAAQIGICGADDLMEFDYPEVYA
                     PLDLGIGRCRISVAELAETAGTDDPSRWSQVTVATKYPNIARQHFASRGIQAEIVHLN
                     GAMELAPRLGLSRLIVDLVQTGATLRANGLVETEVIAQVTSRLIVNRTALKTRPEVIG
                     GFIARLRVALNDTGK"
BASE COUNT          429 a          701 c          720 g          423 t
ORIGIN      
        1 tcagggcacc cacgcccacg ccgatcggcc cacccactaa tccgataacc gcgcccgtcc
       61 cggcgccggt ggcagcaccg ccggaggtgc gatcagcctg actggtcccg cagcccgcca
      121 gaacgaccgt cgtgacgaca aggatcgtta gtgtacgcat gaactctctc cgataaccca
      181 ctgatccatt acagaatgat acggattcgc gtctcgccgc ctatgtgaac aatgcgtcat
      241 ccggcggctt cgcctgcgcc cgggtcgagg accgaaaatt cgtgccacgt cgtgcctgct
      301 gcgcgtgagg ccgggttgca tggcagccag tgttcgtcca tctgtccgct gccacatctt
      361 ccggtcccgc tgggaaaccc aggcgaggat catggtcagg gatcacggtc catgcagcgc
      421 atcttctcgg gcattcagcc ctccggtatt ccaacgctcg gtaattacct gggcgcgctg
      481 cgcaattggg cggcgctgca ggacgggcac gagtgcattt actgtgtcgt cgacctgcat
      541 gcgatcaccg cgtttcagga tccaaaggac ctgacccagc aaacgcggga aatggctgcg
      601 acattgctgg ccatcggcat cgatacctcg aagcacatcg tcttcctgca atcgtcggtg
      661 cgggcgcatg cgcaactggc ctggatcctc aattgtgtcg cgcggatcgg ctggctgaac
      721 cggatgaccc agttcaagga caaggccggc aaggaccgcg agaacgcgtc ggccggtttg
      781 tatgtctacc cgaacctgat ggcggccgac attttggcgt accacgcgac cggcgtgccg
      841 gtgggcgacg accagcggca acatctggaa ctggccaacg acatcgccca aaagttcaat
      901 tttgactatg gcgtcgagtt ctttccgacc atccaaccgc tgatccttgg ccatgctgcc
      961 agggtcatga gcctgcgcga cgggacgaaa aagatgtcga agtcggatcc gtcggatcag
     1021 agccggatca acctcaatga cgatgccgat acgatcgcgc tgaaaatccg ccgcgccaag
     1081 accgatccgg agccgctgcc gagcgaaccc gatggcctcg cgcaccggcc ggaggagcgc
     1141 aatctggtgg ggatttatgc ggagctggcc gacatgacgc cgacagtggt gctgcgcgaa
     1201 catggcggca agggctttgg cgcgttcaag gaggttttaa cggcactgtt ggtcgaaaaa
     1261 ctgacgccga tcgcggccga gaccacgcgc ctgctggccg atcccaccat gatcgacgtc
     1321 atgctgcgcg atggcgctcg gagggctgcg gcaatcgccg atccgattgt cgcaagggcc
     1381 gaagatctcg tgggcttcct gcgggtctga cacttattgg ggcacaggga acgtttcacc
     1441 tcgaccaggc ataacgacag acgcagtgcc ggcgtgatgg tgacgggaca aaaagcccag
     1501 ggtacgatcg tatggatgat gtgatgacag cgaattttgc cgccgcctcg ctggaaccgg
     1561 aaacccagga gccattgatc ctggcgctgc caaagggccg catcctggcg gaatgtgggc
     1621 ccctgctggc gcgtgccggc atcgttccgg ccgccgatta tctcgatgag agcagccgac
     1681 ggctacgctt cgagacctcc gatccgtcgc tcgacgttgt cagggtccgc tcgttcgacg
     1741 tcgccacttt tgtggccttt ggcgcagcgc agatcggcat ctgcggcgcc gacgacctga
     1801 tggagttcga ctatcccgag gtctacgccc cgctcgatct cggcatcggc cggtgtcgga
     1861 tttcggtcgc ggaactggcg gaaaccgccg ggaccgacga tccgtcacgc tggtcgcagg
     1921 tcactgtggc cacgaagtat ccgaacattg cccgccagca tttcgccagc cgcggcatcc
     1981 aggccgagat cgtgcatctg aatggcgcga tggagttggc gccgcgcctt ggtctgtcac
     2041 ggctgatcgt cgatctggtg cagaccggag ccacgctgcg ggcgaacggg ctggtggaga
     2101 ccgaggtgat cgctcaggtg accagccggt tgatcgtgaa ccgcaccgcg ctgaagaccc
     2161 ggccggaggt gatcggcggg ttcattgccc ggttgcgggt ggcgctgaac gatactggaa
     2221 agtaattttc tcgacgtttg cagtgtctcg atgtggcacg tcagctccgg tag
//
LOCUS       DATAVD010001473         4224 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_511511, whole genome shotgun sequence.
ACCESSION   DATAVD010001473 DATAVD010000000
VERSION     DATAVD010001473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4224
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_511511"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..675
                     /locus_tag="VHX39_28265"
     CDS             <1..675
                     /locus_tag="VHX39_28265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046556 - alpha-L-arabinofuranosidase
                     activity [Evidence IEA];
                     GO_process: GO:0046373 - L-arabinose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-arabinofuranosidase C-terminal
                     domain-containing protein"
                     /protein_id="HEX3995087.1"
                     /translation="LSFDEWNVWYRTRRNRLQRTLPGWPVAPPILQEIYTMADALAFG
                     GACIALLNHADRVKVACLAQLVNVIAPIMTEDGGPAWRQTIFYPFAQMSHFGRGRVLR
                     AVIDSPTYDATYFDPRGEQDLYFPITAPYLKFAAVQGHNDIMTLFALNRHLTEPMPLT
                     VTINGLTATSIRAARTLHHPDLNAANTRDAPDTVRPAPLDAVSLTGGTLRATLPPASW
                     TVIRLG"
     gene            complement(676..1518)
                     /locus_tag="VHX39_28270"
     CDS             complement(676..1518)
                     /locus_tag="VHX39_28270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent oxidoreductase"
                     /protein_id="HEX3995088.1"
                     /translation="MDVNQPTGTVSQAEALTLRYGSGAEPAPGPWNDVIATLLSHRSV
                     RGFRPDALPDGTLETLVAAAQSASTSSNLQTWSVVAVTDPDKKAALAKIANGQKHIEQ
                     CPLFLVWLADVSRNERLGVEENVTLETIPHFETYLVAAIDASLAAQNATVAAESLGLS
                     MVYIGALRNNPIEVGRLLGLPPGAMGVFGMCVGYPLPTVTNEVKCRLPQSAILFHDTY
                     DATGESAARAGYDTRIAAFSERHEMTHDTWTKRVIGRMGKLSAMSGRDKLVSILHAMG
                     FPLR"
     gene            complement(1585..2127)
                     /gene="bamE"
                     /locus_tag="VHX39_28275"
     CDS             complement(1585..2127)
                     /gene="bamE"
                     /locus_tag="VHX39_28275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEX3995089.1"
                     /translation="MPNTVVRSVQVRMRRLGLRPIAGMLVLCLSLTACSWILPPPQTR
                     GNKVDPDQLKELVPGTSTQADVTSLIGSPTQKATFDENSWLYITELTRPRIGQTLGVL
                     NQDVVVLTFDDRGVLAGIKKYTQADAVPVSVVSRTTPSPGTEASFMQQLVGNIGKFSP
                     TGAGGPSAGGAGPGASASGL"
     gene            2289..2837
                     /locus_tag="VHX39_28280"
     CDS             2289..2837
                     /locus_tag="VHX39_28280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome C chaperone family protein"
                     /protein_id="HEX3995090.1"
                     /translation="MGLLSLIRRGRYDRVGFELYGAAVAAARDPFLYTGLHVPDTLDG
                     RFDMIGIYAFLLIQRLKREPAPGPALAQAVFDAMFSDMDVNLREMGVGDLSVGRKVRV
                     MWEAFHGRASVYAAAMTAGDMPALDAALERNVWRGNPPPDMSILALRRLVLAQEAQLD
                     TQSVGLLAQGRVQFLSAVDASQ"
     gene            2834..3346
                     /locus_tag="VHX39_28285"
     CDS             2834..3346
                     /locus_tag="VHX39_28285"
                     /inference="COORDINATES: protein motif:HMM:NF014657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEX3995091.1"
                     /translation="MTIELSRPVALSKIRAKRLTVVVQATPEECAQVAARMGLPAIQS
                     LECRYMLSRDVDGVAVLAEGHLRAEVTQTCVTSAEDFVAKVEETFSLRFVPADAESDD
                     PDPGLPDEIPYKGDTIDLGEATAEQLGLALDPWPRIEGATVPEIEDEAESSPFAALAQ
                     RFGPGRSRLQ"
     gene            3454..4092
                     /locus_tag="VHX39_28290"
     CDS             3454..4092
                     /locus_tag="VHX39_28290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX3995092.1"
                     /translation="MPRLIGRYLWLILHTNRWTLDGAENFAPHGAGSPAVFSFWHEHL
                     PLMPALAMLARRSPSYHAAPIHTLVSKHRDGQIIGAVVRGFGIEPVLGSSTRGGATGL
                     RKLLRLLLRGGMIGITPDGPQGPRREAAQGVAQLAALAGVPILPCAAQTSRRIVLHTW
                     DRMAVPLPFGRGVVVCGPAITVPREAWRDALPTITAAMNEVADRADLLCAST"
BASE COUNT          741 a         1334 c         1340 g          809 t
ORIGIN      
        1 ctcagcttcg acgagtggaa cgtctggtac cgcacacggc gcaaccgatt gcaacgcacg
       61 ttgcccggct ggccggtcgc gccgccgata ttgcaagaaa tttatacgat ggcggatgct
      121 ctggcgtttg gcggcgcctg catcgcgttg ttgaaccacg ccgaccgggt gaaggtcgcc
      181 tgtcttgccc aactggtcaa cgtgattgcc ccgatcatga ccgaggacgg cggcccggcg
      241 tggcggcaga ccatctttta cccgtttgcg caaatgagtc atttcggtcg cggccgggtg
      301 ttgcgtgccg taatcgacag tccgacctat gacgcaacgt atttcgatcc gcgtggcgag
      361 caggatttgt atttcccgat cacggcaccg tacctgaagt ttgcggccgt gcagggccac
      421 aacgacatca tgacgttgtt cgcgctcaat cgtcatctga cggagccgat gccactgacc
      481 gtaacaatca acggattaac cgccacgtcg atcagggcgg cccgtactct gcatcacccc
      541 gacctgaatg ccgccaacac acgagacgca ccggataccg tgcggcctgc accgttggat
      601 gccgtctcgc tcaccggcgg tacgttgcga gcaacgctgc cgccggcgtc atggactgtg
      661 attcgtttgg gatagctacc gcagcgggaa gcccatcgcg tgcagaatgg acaccagctt
      721 gtcccgcccg ctcatcgcgg agagcttgcc catccgccca atcacccgct tcgtccaggt
      781 gtcgtgcgtc atctcatgcc gctccgaaaa cgctgcaatg cgggtatcgt accccgcccg
      841 ggccgcactc tcgccggtcg cgtcataggt gtcgtgaaac aaaattgccg attgcggcag
      901 ccggcacttc acctcattgg tgacggtcgg caacgggtag ccgacacaca ttccgaacac
      961 gcccatcgca cctggcggca ggcccaacag ccgtcccacc tcgatcggat tattgcgcag
     1021 tgcgccgatg tacaccatcg acaggccaag cgattccgcc gccacggttg cattctgcgc
     1081 tgccagcgag gcgtcgatcg ccgccaccag atacgtctcg aaatgcggga tggtttccaa
     1141 ggttacgttt tcttcaacgc caagccgctc gttacgcgac acgtctgcca accacaccag
     1201 aaacagcggg cactgttcga tatgcttctg accattcgcg attttggcaa gcgctgcctt
     1261 cttgtccgga tcggtgactg ccaccaccga ccacgtctgc aaattcgaac ttgtcgaggc
     1321 agattgggct gcggcgacca aggtctccag cgtgccgtca ggcagcgcat ccggccggaa
     1381 gccgcgcacg gaacgatgcg ataacaatgt cgcaattaca tcgttccacg ggccgggagc
     1441 cggctcggcg ccggagccat agcgcaacgt aagcgcctcg gcctgggaca ccgtcccagt
     1501 cggttgattg acgtccatgt ttctgtccca tcggtaagtt acggttggcg gtcaagcctg
     1561 cccaatgcca gccgataacg caactcagag gccgctggcg ctggcccccg gcccggcgcc
     1621 accggccgac ggtccgccgg cgccggtcgg gctaaacttg ccgatattgc cgaccagctg
     1681 ctgcatgaac gatgcctcgg tgcccggcga cggtgtggtg cgcgacacaa ccgagaccgg
     1741 aactgcgtcc gcctgggtat atttcttgat gccggcgagt acgccgcggt cgtcaaaagt
     1801 cagcaccacg acgtcctggt tcagcacgcc aagggtctgc ccgatccgag gccgggtaag
     1861 ttcggtaatg taaagccagg aattctcgtc gaacgtcgcc ttctgcgtgg gcgagccgat
     1921 cagcgacgtc acatcggcct gggtcgatgt gcccgggacg agctccttca actgatccgg
     1981 gtcgaccttg ttgcccctgg tttgcggcgg cggcagaatc cagctgcagg cggtcaggct
     2041 gaggcacagc accagcatcc cggctatcgg acgcaagccg agccggcgca tccggacctg
     2101 aaccgaacga acaacagtgt ttggcacgcg ataacttccc caatggcaag gccgggcccg
     2161 cttgtggacc tgggcgctta ccaccgcgta tgggatagtg gctgttcccg tgtcaatcgg
     2221 tggcagtcgc aagcggcttg ccagcgcctc gtctcggggg tagctgcgca cgtttgcagg
     2281 agaatggcgt gggattgctg agcctgatac ggcgcggccg gtatgacaga gtgggcttcg
     2341 aactctacgg tgctgccgtg gcggcggcgc gtgacccgtt cctttacacc ggtctgcacg
     2401 tgcccgacac cttggacggg cgcttcgaca tgatcggcat ttacgcattt ttgctgatcc
     2461 agcgcctcaa gcgggagcct gcaccgggtc ccgctctggc gcaggcggtg ttcgatgcca
     2521 tgttcagcga catggatgtg aatctgcgag agatgggcgt aggcgatctg tccgtaggcc
     2581 gtaaggtccg cgtgatgtgg gaagcgtttc acggccgcgc ctctgtttat gcggctgcca
     2641 tgaccgccgg cgacatgccg gcgctggacg cggcgctcga gcgcaacgtc tggcggggca
     2701 atccgccgcc ggacatgtca atattggcgc tacggcggct cgtgctggcg caggaggcac
     2761 agctcgacac gcaaagcgtc ggcttgctgg cccagggaag ggtgcagttt ctttccgcgg
     2821 tggacgcgag ccaatgacca tcgaactgtc tcgcccggtt gcgctgtcga aaattcgggc
     2881 gaaaaggctg accgtcgtgg tgcaggcgac cccggaggaa tgtgcgcagg ttgccgcacg
     2941 gatgggactg cctgccattc agtccctgga atgtcgctac atgctgagcc gtgatgttga
     3001 cggcgttgct gtcctggccg agggtcatct gcgcgccgag gtcacgcaaa cctgtgtgac
     3061 ctcggcggaa gactttgtcg ccaaggtcga ggaaaccttt tcgcttcgct tcgtgccagc
     3121 cgacgctgag agcgatgacc ccgatcccgg cctgcccgac gaaatcccgt ataagggcga
     3181 tacgatcgac ctcggcgaag cgaccgccga gcaacttggg ctggcgttgg atccctggcc
     3241 caggatcgag ggcgcaactg tgccggagat cgaagacgaa gctgaaagtt cgccgtttgc
     3301 cgctttggcc caaaggtttg ggcccggccg gagcaggctc cagtaactca ccgccaccgg
     3361 gaggcggcgc cgacgtcttc ccttggtttc gtaacgtatg ctaccgccgc actgatgaaa
     3421 tcgctgctgc gatcacgccc ggttcaatac cttttgccac ggctgattgg acgctatttg
     3481 tggctgatcc tgcataccaa tcggtggacc ctcgatggcg ccgaaaattt tgctccgcat
     3541 ggcgccggat cgcccgccgt gttcagcttt tggcatgagc atctaccgct gatgccggcg
     3601 ctggcgatgt tggcccgccg gtcgccttcg tatcacgcgg cgccaatcca tactctggtc
     3661 agcaagcacc gcgacggcca gatcatcggt gcagtagtcc gcgggttcgg gatcgagccg
     3721 gtgctgggtt cgtcaacgcg cggcggagca accgggttac gcaaactgct gcgtttgttg
     3781 ctgcgcggtg gcatgatcgg gatcacaccc gacgggccgc agggtccacg acgagaggca
     3841 gcgcaaggtg tcgcccaatt ggcggcgctg gccggggtgc cgatcctgcc ctgtgccgcg
     3901 caaacctcgc ggcggatcgt actgcacacc tgggatcgca tggcggtgcc gttgccgttc
     3961 ggtcgcggtg tggtggtgtg cggacccgcc atcactgtgc cgcgcgaggc ctggcgggat
     4021 gcgttgccaa cgatcaccgc ggcaatgaac gaggttgccg accgtgccga cctgctgtgt
     4081 gcgagcacct gatggcagag tcggtcatgc agccgttatg ggccggtgcg gcaacgatcg
     4141 cctcgccggt gctgcggttg ttgctgcgct accgtgtcac gcgcggcaag gagatcggcg
     4201 cccgtctccc cgaacgtcgc ggca
//
LOCUS       DATAVD010001474         2827 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_144615, whole genome shotgun sequence.
ACCESSION   DATAVD010001474 DATAVD010000000
VERSION     DATAVD010001474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2827
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144615"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="VHX39_28295"
     CDS             <1..285
                     /locus_tag="VHX39_28295"
                     /EC_number="4.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188056.1"
                     /note="catalyzes the formation of formyl-CoA from
                     oxalyl-CoA; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxalyl-CoA decarboxylase"
                     /protein_id="HEX3995093.1"
                     /translation="DGIYRGDGVNPGGGSDPATTAFVRGARYDTMIEGFGGVGVSVTT
                     PDELKRAVDAAMDSGRPTLINAVIDPAAGTESGNIGNLNPRSALAKKGAA"
     gene            286..1560
                     /gene="frc"
                     /locus_tag="VHX39_28300"
     CDS             286..1560
                     /gene="frc"
                     /locus_tag="VHX39_28300"
                     /EC_number="2.8.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005880857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0033608 - formyl-CoA transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009636 - response to toxic substance
                     [Evidence IEA];
                     GO_process: GO:0033611 - oxalate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyl-CoA transferase"
                     /protein_id="HEX3995094.1"
                     /translation="MSKALDGIRILDFTHVQSGPTCTQLLAWFGADVIKVERPGVGDI
                     TRGQLRDIPDVDSLYFTMLNHNKRSITIDGRNPDGKHVLEELVKTCDVMVENFAPGAL
                     DRMGFTWERIQALNPRMILASIKGFGPGPYADCKVYENVAQCAGGAASTTGFDDGPPL
                     VTGAQIGDSGTGLHLALGIVCALHHRYATGRGQKVDVAMQDGVLNLCRVKLRDQQRLA
                     HGPLTEFPQYPDGKFGEAVPRSGNASGGGQPGWILKCKGWETDPNAYIYFIAQAPVWE
                     SICDVIGKPEWKTDPNYAKPPARLPRLRHIWDTIEAWTMTKTKFEAMDILNKYDIPCG
                     PILSMKEIAEEPSLRATGTVVEVDHPTRGKFLTVGNPIKLSEHVSEVKRSPLLGEHNE
                     EVLRDVLQFDDAKLQRMLASPGLGGKVKAAAE"
     gene            complement(1562..>2827)
                     /locus_tag="VHX39_28305"
     CDS             complement(1562..>2827)
                     /locus_tag="VHX39_28305"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3995095.1"
                     /translation="GAFSERLAGRPLTWLMQPTLDPAVWLGLFDTVAATLQKTRKPVR
                     DMPMRHVVAGPPPPVRSRAHRRGPVDLRRSGTTSALVIPEAYDDEANWTPCAHIRLLR
                     PLHHPVTGHGLATSITDADGASRYHADVVITQRHAVSSIAAAEALVDHARRTDAALVF
                     DIDDDLLTIPPEHPEAAELTSKAAVVEYLVRRADIVRTSTAALAARIAPLARRVQVAP
                     NALDERIWLPELRERANRYDGVRILCMGTMTHDADFALLLPALTEIHSRFGDQIQFDL
                     IGFVTDTTVPTWIRRLAPTPHAGRSYAGFVHWLRSSGPWDIGLAPLAETPFNACKSAI
                     KVLDYAALGLASVASDVAAYRGSLADGPGGILLPNTTDAWYEALSRLIRDAAWRHQLA
                     AGGAAQLLASRTLERQADAWPDVMRRKLG"
BASE COUNT          568 a          802 c          921 g          536 t
ORIGIN      
        1 gacggcatct atcgaggcga tggcgtcaat ccgggtggcg gctccgatcc ggccacgacg
       61 gcgtttgtca ggggcgctcg ttacgatacc atgattgaag gtttcggtgg cgtcggcgtc
      121 agtgtgacca cgccggatga gctgaaacgc gccgtcgacg cggccatgga ttccgggagg
      181 cccacgttga tcaacgcggt catcgatccg gcagcgggca ccgagagcgg caatatcggc
      241 aatctcaacc cgagaagtgc attagcgaag aaaggagcag cataaatgtc gaaagcgctc
      301 gatggtatca gaattctcga ttttacccat gtgcagtcgg ggccgacctg cacccagttg
      361 ctggcatggt ttggcgccga tgtgatcaag gtggagcggc cgggtgtcgg tgatatcacc
      421 cgtgggcagt tgcgcgacat tcccgatgtc gacagcctgt atttcacgat gttaaatcat
      481 aacaaacgct cgatcaccat tgatgggcgt aatcccgacg gcaagcacgt gctggaagaa
      541 ttggtgaaga cgtgcgacgt gatggtggag aattttgcac ccggtgcgct ggaccgaatg
      601 ggtttcacgt gggagcgaat ccaggcgttg aacccgcgca tgattctcgc ctcaattaaa
      661 ggtttcggtc ctgggcctta tgcggactgc aaagtttacg agaacgttgc gcaatgtgcc
      721 ggtggtgcgg cgtccactac cggtttcgac gatggtccgc cgttggtgac cggcgcgcag
      781 atcggcgatt ccggcaccgg tttgcatttg gcattgggca tcgtgtgcgc gctgcatcat
      841 cgttacgcga ccggtcgcgg acagaaagtc gacgtggcga tgcaggacgg agtgctgaat
      901 ttgtgccggg tgaagttgcg ggatcagcaa cgccttgcgc atggaccgct gactgaattt
      961 ccgcaatacc cagatggcaa gttcggtgag gcggtgccca ggtcggggaa cgcgtcgggt
     1021 ggggggcagc ctggttggat tctgaagtgc aagggttggg aaaccgatcc aaatgcatat
     1081 atctacttca ttgcacaggc gccggtttgg gaatccattt gcgatgtgat cggcaaaccg
     1141 gaatggaaga ccgatccaaa ctatgcaaag ccgccggccc ggttgcctcg gttgcggcac
     1201 atctgggaca ccatcgaagc ctggaccatg acgaagacga aattcgaggc gatggatatt
     1261 ttgaacaaat acgatatccc ctgcggcccg atcctgtcga tgaaggaaat cgccgaggaa
     1321 ccgtcgctgc gggccaccgg cacggtggtc gaggtggatc acccgacccg cggcaagttc
     1381 ctgaccgtcg gcaatccgat caagctgtcg gaacatgtca gcgaagtgaa acgttcgcca
     1441 ctgttgggcg agcataacga agaagttctt cgggatgtgc tgcaattcga cgatgccaaa
     1501 ctgcaacgca tgttggcgtc ccccggactg ggcggcaagg tgaaggccgc ggcggaatga
     1561 gttaaccgag ctttcgccgc atgacgtcag gccatgcgtc ggcctgacgt tccagcgtgc
     1621 gggacgccag caactgtgcc gcgccgcctg ctgccagctg gtggcgccat gcggcgtccc
     1681 ggatcaatcg gctgagagcc tcataccagg cgtcggtggt gttaggcagc agaatgccgc
     1741 ctggtccgtc ggccagcgat cctcgatacg ccgccacatc cgatgccacc gatgccagac
     1801 ctaaagcggc ataatcgagc actttgatcg cagatttgca ggcgttgaac ggggtctcgg
     1861 cgagcggtgc gaggccgatg tcccatggcc cggaggatcg cagccagtgg acgaagccgg
     1921 cgtaggaccg tccggcatgc ggcgtcggtg ccagccgcct gatccaggtt ggcaccgttg
     1981 tatccgtcac aaagccgatc agatcgaact ggatttgatc gccgaaccga gaatggatct
     2041 cggtcagcgc cgggagcagc agggcaaagt cggcgtcatg ggtcatggtg cccatacaca
     2101 ggatacgcac tccgtcgtaa cgattggcgc gttcgcgcag ttcgggcagc cagatccgtt
     2161 cgtccagcgc attgggtgcc acctgcaccc ggcgggccag cggcgcgatc cgggcggcca
     2221 acgctgcagt tgatgtccgc acaatgtcgg cccgacgaac cagatactcc acgactgcgg
     2281 cttttgacgt cagctcggct gcttcaggat gttccggcgg gatcgtcaac aggtcgtcgt
     2341 caatgtcgaa aaccaatgcc gcatcggttc gcctggcgtg gtccaccagg gcttccgcgg
     2401 ccgcaatgga cgacaccgca tgacgttgag ttatcacaac gtcggcatgg tagcgggatg
     2461 cgccatcggc atcggtgatg ctggttgcca ggccgtgtcc ggtcaccgga tgatgcaacg
     2521 gccgcaacag cctgatgtgg gcgcagggcg tccagttcgc ctcgtcgtca tacgcctctg
     2581 ggataaccag cgccgaggtc gtaccgctac ggcgcaaatc aaccgggccg cgccggtgcg
     2641 cgcggctacg gaccggtgga ggcgggccgg ccacaacgtg tcgcatcggc atgtcgcgca
     2701 ccggcttccg cgtcttctgg agcgttgctg caacagtatc gaacagcccc agccataccg
     2761 ccggatcgag tgtcggttgc attagccaag tcaacggacg tccggcaaga cgttcggaga
     2821 atgcacc
//
LOCUS       DATAVD010001475         3505 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1256717, whole genome shotgun sequence.
ACCESSION   DATAVD010001475 DATAVD010000000
VERSION     DATAVD010001475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3505
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1256717"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1553
                     /locus_tag="VHX39_28310"
     CDS             <1..1553
                     /locus_tag="VHX39_28310"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX3995096.1"
                     /translation="EKLPPYTRESAEARIEKVIAGIPQTFEWRCQRKDGTVFWAEIGC
                     QPTTYGGRDYLLATLRNIDARKTAEAKLTEMARFDRLTGLANRGVFVTSLEHEIAATH
                     RHGSGLAVFFLDLDHFKDVNDTMGHPAGDDLLQSVAQRLCDNVRAADTVARFGGDEFA
                     VLMPDVREYAVVETLAKRMIDAMEPPFQLGTNQVHAGISIGIALHEPGMDAEALLAHS
                     DVALYRAKSEGRHTYRLFNADMDLEVRNRVSMVSDLREAIAGGQLFLVYQPQVDVNSG
                     RITGVEALVRWRHPTRGVLSPVEFIAAAEHTGLIVPIGRWVLTEACRQAQRWLDAGIA
                     PDRVAVNFSAVQFKISGEVTKEIDAVLEETGLPAHMLEVELTESTVMVTRGNSGILQA
                     LRRRGVTIAIDDFGTGYSSLAHLRRFPIDRVKLAQEFIIDLVAGSSDAMIVQAAIGLA
                     RTLGAGLIAEGVETDEQLALLKSWGCEAAQGFLFARPGEADAITDLLRRGRLDHVAGS
                     AQAEPVAS"
     gene            complement(1607..2269)
                     /locus_tag="VHX39_28315"
     CDS             complement(1607..2269)
                     /locus_tag="VHX39_28315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010666321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEX3995097.1"
                     /translation="MNQNRARIIAVLCGVPLGFGIFGVTPGFAQFGGLDNPGSIGPAT
                     KQNLRSLNKPVRPEPVAPSLPGTKAPGEAAAPSEGAASMTPTEALFDAINRGDIPAAR
                     DAINRGADLRGLNVLGLTPLELSVDLGRNDISFLLLSMRDGDASSRSTTRTGADSGQS
                     DAILRAGTAPRPPSRSHVTTASAEMDEEPAAGGYRAYSGDGGTPIPAAGFLGFDPGRA
                     AH"
     gene            complement(2392..>3505)
                     /locus_tag="VHX39_28320"
     CDS             complement(2392..>3505)
                     /locus_tag="VHX39_28320"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEX3995098.1"
                     /translation="GEAPRMKLADLPTPCLVLDRQKLQHNIRTMAGNLARHKVPLRPH
                     MKTAKSIDVARLALLGQPGGITVSTLAEAEYFSSHGIADILYAVGVTPGKLDQVARLN
                     AGGANVTVITDDLLAAEAIAVHPANIKALIEIDCGEQRGGVLVSEDLLSEIANRLGNH
                     LAGVMTHAGHSYQGRSIAEITRIAELERSHVVYAAQRLRTEGHVVSVVSAGSSPTGRH
                     AETMNGLTEFRAGVYMFGDLFQSEIDTHARDGIALTVLTSVIGRPAGRLLVDAGALAL
                     SKDRSTEASPHDFGFGLVMDLQGEPALGDAIVRKAYQEHGVVELDPTSPIAVPVGTRL
                     RILPNHACLTAAAHDRYYVIDGSDEVVAVWPRLNGW"
BASE COUNT          676 a         1080 c         1084 g          665 t
ORIGIN      
        1 ccgagaagct gccgccgtat acccgggaat cggcggaagc ccgaatcgaa aaagtcattg
       61 ctggaatccc gcaaaccttc gagtggcgct gccaacgaaa agacggcacg gtattctggg
      121 ccgagatcgg gtgtcagccg acgacctatg gcggccgcga ttatttactg gccacacttc
      181 gcaacatcga cgcgcgaaaa acagccgaag caaaactgac cgaaatggcg cggttcgacc
      241 ggttgaccgg gctcgccaat cggggcgtgt ttgtcaccag tctcgagcac gagattgccg
      301 ccacacatcg ccatggcagc ggccttgcgg tattctttct cgatctggat catttcaaag
      361 acgtaaacga taccatgggc cacccggcgg gcgacgacct gttgcaatct gtggcccaga
      421 ggttgtgcga caatgtgcgg gcggcagaca cggtcgctcg tttcggtggc gatgagttcg
      481 cggtgctgat gcccgacgtt cgcgagtatg ccgttgtcga aacattggcg aagcgtatga
      541 tcgatgcgat ggagccgccg tttcagctcg gtaccaatca ggtccatgcc gggatcagca
      601 tcggcatcgc actccatgag cccggaatgg atgccgaagc attgctcgcc cattccgacg
      661 tagcgcttta tcgtgcgaag tccgagggtc gccacacgta tcgcctgttc aacgccgata
      721 tggatctgga agtacgcaat cgcgtgagca tggtcagcga tctgcgcgaa gcaatcgccg
      781 gcggccagct cttcctggtt taccaaccgc aggtggatgt gaattccggc cgcatcaccg
      841 gcgttgaggc gttggtcaga tggcgccatc cgacgcgcgg ggtactgtca ccggtagaat
      901 tcatcgcggc ggccgagcac accggtctga tcgtgccgat tggccggtgg gtgctgacgg
      961 aagcctgtcg tcaggctcag cgttggctgg acgccgggat tgcgcccgat cgcgtggcag
     1021 tcaatttctc cgcagtgcaa ttcaaaatct ccggcgaggt caccaaggag atcgatgccg
     1081 tcctcgagga aaccggcctg ccagcgcaca tgctggaggt ggagctgacc gaatccaccg
     1141 tgatggtgac gcgaggcaac agcggcatcc tgcaggccct gcgtcggcgc ggtgtgacga
     1201 tcgcaatcga tgatttcggt accggatatt cgtctctggc ccatttacgc cgcttcccga
     1261 tcgaccgggt caaactggca caggagttca tcatcgatct cgttgccggc tcgagcgatg
     1321 cgatgatcgt tcaggccgca atcggacttg cccgcactct gggcgctgga ttgatcgccg
     1381 agggcgtgga gaccgacgaa cagcttgcat tgctcaaatc gtggggatgt gaagccgccc
     1441 agggatttct gttcgcgagg ccaggggaag ctgacgcaat aacggatctg ctgcggcggg
     1501 gcagactcga ccacgtagca ggatcagccc aggcggagcc ggtcgccagt taacaacccg
     1561 acttccgccg gtgcgcgcca ccggtgacga actgcgtcgg cagcgttcag tgggccgccc
     1621 ggccagggtc aaatccgagg aaccccgcag cgggtatcgg cgtcccgccg tcgcccgagt
     1681 aagctctgta gcccccagcg gccggctctt catccatttc tgctgacgcg gtggtgacat
     1741 gggaccggct gggaggcctc ggtgcggtgc cggctcgcag aatcgcatcg gactgcccgg
     1801 agtccgcgcc ggttcgggtg gttgagcgcg acgaggcgtc cccgtcacgc atcgaaagca
     1861 gcaagaacga aatatcgttt cgcccgagat cgacggacag ctccaacggc gtcagcccca
     1921 aaacgttcag gccccgcaga tccgcgcccc gattgatcgc gtcccgcgcc gccgggatat
     1981 caccacggtt gatcgcgtcg aacagtgcct cagtcggcgt catgctcgcc gccccctcac
     2041 tgggcgccgc cgcctcaccg ggcgccttgg tccccggcag tgatggagcg accggttcag
     2101 gtcttaccgg tttgttaagc gatcttaaat tctgtttcgt cgccggccct atgctgccgg
     2161 ggttgtccaa cccaccgaat tgagcgaagc cgggcgtgac gccgaaaatg ccgaagccta
     2221 atggaacgcc gcacaggacg gcgataattc gagcccgatt ctggttcatt ttggtcaccc
     2281 gttataatcc cctcatagta tacagcatgc gctgaatccc gtcagctcgc aagtctgcgt
     2341 cccgcacagc cgcctttcgt gccggcggga taaaggttta acaggcatta cttaccaacc
     2401 attcaaccgc ggccagaccg cgacaacttc atcggagccg tcgataacat agtaccggtc
     2461 gtgtgcggct gcggtcagac acgcgtgatt gggcaagatc cgcagcctgg tcccaaccgg
     2521 caccgcaatt ggactggtgg ggtccaattc gacgacgcca tgctcctgat acgctttccg
     2581 gacgatggca tcgcccagag ccggttcacc ctgaaggtcc atcaccaacc caaagccgaa
     2641 atcgtgcggc gatgcctccg tgctgcgatc cttggacagg gccaaagcgc cggcatcgac
     2701 cagcagccgg ccggccggtc gtccgatcac gctggtcagc accgtcaacg cgatgccgtc
     2761 ccgtgcgtgg gtgtcaattt ccgactggaa caaatctccg aacatataga cgccggcgcg
     2821 gaactccgtc agtccgttca ttgtctcagc gtgccggccg gtgggtgaac tgccggctga
     2881 gacaaccgaa acgacgtgcc cctcggtgcg caggcgttgc gcggcataga ccacgtgact
     2941 gcgctccagt tcggcgatcc gcgtgatctc ggcgatgctg cggccttgat aggagtggcc
     3001 tgcatgagtc atgacgccgg ccaaatgatt gcccagtcga ttggcgattt cggaaagcag
     3061 gtcctcagat accaggacgc cgccgcgctg ctcgccgcaa tcgatttcga tcaaggcctt
     3121 gatgttggcg ggatgcaccg cgatcgcctc ggccgccagc agatcgtcgg tgatcacggt
     3181 gacgttggcg ccaccggcgt tcagtcgcgc gacctggtca agtttccccg gtgtgacgcc
     3241 gaccgcgtaa agaatgtcgg caatgccatg gctggagaag tactcagcct cggccagagt
     3301 tgagacagta atcccgccag gttggccaag cagcgccagc cgcgccacat cgatcgactt
     3361 tgcagttttc atgtgcggcc gtagcggcac tttgtgacgc gccagattgc ccgccatagt
     3421 acgaatgttg tgctgcagtt tctggcggtc gagaactagg cacggtgtcg gcaaatcggc
     3481 cagtttcatg cgaggggctt ctccg
//
LOCUS       DATAVD010001476         2234 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3490006, whole genome shotgun sequence.
ACCESSION   DATAVD010001476 DATAVD010000000
VERSION     DATAVD010001476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2234
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3490006"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..612
                     /locus_tag="VHX39_28325"
     CDS             <1..612
                     /locus_tag="VHX39_28325"
                     /inference="COORDINATES: protein motif:HMM:NF015487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbG/VirB9 family P-type conjugative transfer
                     protein"
                     /protein_id="HEX3995099.1"
                     /translation="WPVNWTGNLAYVKPAKAGSRTNINLITASGNVYSFLATEISTTS
                     GAHADLKLFVNPADQSAIVAMKDKPRFVSAEAVEGYKKAAEQAKQQLVSIQASAEKEL
                     EREKAALQANYPATIKHDYKYTTPPKNPFNVVAIYHDDKFTYIEATPQEAPAVYEVKD
                     GKPSLVQYDFDQKTNRYTIPKILDDGYLRVGKAELKFHRENNG"
     gene            864..2171
                     /locus_tag="VHX39_28330"
     CDS             864..2171
                     /locus_tag="VHX39_28330"
                     /inference="COORDINATES: protein motif:HMM:NF015688.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbI/VirB10 family protein"
                     /protein_id="HEX3995100.1"
                     /translation="MAHEVIPPREEADVRQMPDPQHLLPRGGLTNRHKRWIFFAATAI
                     VLLVVMANIVATNPRAPGAPVPRQQNPALRQNPTPAQIRDMENTLAQQETALLDDAKR
                     KQQQLEQTRAAAQASIPVGSAMSADDLQRAAALQDAAQARAQYEQMYGPGGQPGMQRS
                     QLQAAKEQEAYKSLFADNLVRQDAPPTPPPQSSTTQAAAAVTTGDNVGTTLNGEAQLK
                     PAAVEKQKSRQPLDFDPAAQQNYWLPEGTVMEAVLTNRLDGDAVGPVNCMITTDVYLP
                     GTRLVLIPQGARVLGEASKVSSIGEQRLAVAFHRILVPGLKEYAIPLDEEPPALAQAG
                     EVGLHDKVNNHYFSIFGASLAVGAIGGLAQIGNSYTGLGYDPSVQFRNGVSMSTAESA
                     DRVLDRFLNRMPTITIREGTRVKILLTGDLQVPAFETMHTGGS"
BASE COUNT          544 a          657 c          610 g          423 t
ORIGIN      
        1 tggccggtca actggaccgg caatctcgcg tacgtgaaac ctgcgaaagc gggcagccgt
       61 acgaacatca atctcatcac ggctagcggc aatgtctaca gtttcctcgc caccgaaatc
      121 tccactactt cgggcgcgca cgctgacctg aaacttttcg tgaatccagc agaccagagc
      181 gccatcgtcg caatgaagga taagccccgt ttcgtaagtg cggaagccgt cgaaggttac
      241 aagaaagccg ccgagcaggc caagcagcag ttggtatcca tccaagcctc cgcagaaaag
      301 gaactggagc gtgagaaggc ggcacttcag gcgaattatc cggccaccat aaaacacgac
      361 tacaagtaca cgaccccgcc gaagaatcct tttaacgtgg ttgcgatcta tcacgatgac
      421 aagttcacct acattgaagc cacgccacaa gaagcccctg ccgtgtacga agtgaaggac
      481 ggaaagccaa gcttggtgca gtacgacttc gatcagaaga caaatcgtta caccatccca
      541 aagattctgg acgatggcta tctgcgcgta ggcaaggccg agctgaagtt tcaccgagaa
      601 aataacggct aatgacgcta cgtatcgtcc gttttcaggt tctagcagca gtgctctgga
      661 ctgccatcag cttgctatcg ggctttgtcg cgtccagata cttcattgat gccgagctgc
      721 gaaggaccga cgcttgtatg cgacacattg ccgaggacct cgatcgacac ggattagcga
      781 tggcgcagca cgttttaaaa acgactcgcg cgattgatca gagaattgcc tcacttgcga
      841 ttgagaagga gcactgcaaa taaatggcgc acgaagtgat tcctcctcga gaggaagctg
      901 acgttcgtca gatgccagac ccgcagcatc tcttgccacg aggcggtctt acgaaccgcc
      961 acaagcggtg gattttcttt gctgccacgg caatcgtcct gctagtcgtc atggcgaaca
     1021 ttgttgctac caacccgcgc gctcctggag ccccggtccc ccgtcaacaa aatcctgctc
     1081 tacgccagaa tccaactccg gcgcagatcc gagacatgga gaacacactg gcccagcagg
     1141 agaccgcgtt actggacgac gcgaagcgga aacaacagca gttagagcaa acccgcgctg
     1201 ccgcccaagc ctcgattcct gttggtagtg caatgagtgc ggacgacctg caacgcgccg
     1261 cggctctcca ggacgctgct caagctcgcg ctcaatacga acagatgtac ggcccagggg
     1321 gtcagcccgg aatgcagcgc tcgcagctcc aggcagcgaa agaacaggag gcctataaat
     1381 cgcttttcgc cgacaacctg gtgcggcagg atgcaccgcc tacaccgccc ccgcaatcga
     1441 gtacaaccca ggcagccgcc gctgttacca cgggcgacaa cgtaggcact actctgaacg
     1501 gcgaagcgca actcaaacct gccgctgtcg aaaaacaaaa atcgaggcaa cctctcgact
     1561 ttgaccccgc tgcgcagcag aactattggc tgcctgaggg gaccgtgatg gaagctgtgc
     1621 tcaccaatcg actcgatggc gacgccgtgg ggccggtcaa ctgcatgatc acgacagacg
     1681 tttatctgcc cggcacacgt ctcgtcctaa ttccgcaagg agctcgggtg ttgggcgaag
     1741 cgagcaaagt gagctctatc ggtgagcagc ggctcgcagt cgcctttcat cgcatcttgg
     1801 taccgggatt gaaggaatat gctattccgc tcgacgaaga gcctccggcg cttgctcagg
     1861 ccggcgaggt tgggttgcat gacaaggtca acaatcacta cttttcgatc tttggcgcga
     1921 gcctggccgt gggcgcaatc ggcggcctcg ctcaaattgg caacagttat acaggcctgg
     1981 gttatgaccc ttccgtccag tttcgcaatg gcgtttccat gagcaccgcg gaatcggctg
     2041 atcgcgtctt ggaccggttt ctcaatcgta tgccgacgat aacgatccgg gagggcacac
     2101 gagtaaagat tctgcttacg ggcgatcttc aggtcccggc gtttgaaacc atgcatacag
     2161 gaggctcgta aatggaccca aaaacggaac ggatgatccg caacgacatc cgactgcggc
     2221 ggtcgccgct gctg
//
LOCUS       DATAVD010001477         1891 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3301807, whole genome shotgun sequence.
ACCESSION   DATAVD010001477 DATAVD010000000
VERSION     DATAVD010001477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1891
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3301807"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            373..>1891
                     /locus_tag="VHX39_28335"
     CDS             373..>1891
                     /locus_tag="VHX39_28335"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEX3995101.1"
                     /translation="MTRFITARPDGAKELVLAIDGLRCGACVWLIESVLGREPSVQVG
                     RVNMTSRRLKLVWRGPESEAARLIGRIEALGYRLVPYDPVALAASRDDTDRALIRALA
                     VAGFAAINVMLMSIGVWAGDAAGLLDGMGPATRDLLHLVSALIALPAIAYAGQPFFRS
                     ALAVLRHGRTNMDVPISLGVLLVSGLSLVQTLSHGHNAYFDSAITLLFFLLIGRVLDH
                     RARGRVRATAELLLTLQSTHVTVIADNLTAARRPARSLLPGERVLVGMGERIGVDGVV
                     ERGTSFVDTSLVTGESLPVTVSTGAPVFAGTTNLSAPLTVRVTAAEHGTVLAECARLI
                     EASEARRSRFVVLADRVARRYAPVVHLTALATFVGWYAWGGVSLSQALLTASAVLLIT
                     CPCALALAVPVVQVIATARLFRSGILLKSGTALERLAEIDTVVFDKTGTLTEPLLALV
                     RDGVDPVALREAASLAAHSRHPLARALVAAAGNVPVVEQVEEHSGLGVSTPAMQLG"
BASE COUNT          286 a          536 c          664 g          405 t
ORIGIN      
        1 gcctctcggg gatcgccatt tgcgccaggt gcggtttgtc gaagtcacgg ccggtcacta
       61 ccgtggagat gtgaccctgg acgagaaagg gcagtgggag ctcgaaatct gggctatcgc
      121 cgacgggcag gaattcagca cgacacggcg gattatggcg cagtgactgc gctcgagctc
      181 gatgaacgcg tggtcacgga ggagacgggt tcctgtgccc attgtgggca acccgcatcg
      241 gctggaaggc ggttctgttg tcctggatgt gaagccgcat ttgatgcgat tcaggacctg
      301 ggccttggat cgttttacga acgctgcatt gccgatcggc cgccgcgacc ggaacgattt
      361 gaaccgtacg aattgacccg ttttattacc gcccgtccgg atggcgccaa ggaacttgta
      421 ctggcgatcg acggcctgcg ttgcggggcc tgcgtttggc tgatcgaatc tgtactcggc
      481 cgtgagccat cggtgcaggt cggccgggtc aatatgacca gccggcggct gaaactcgtg
      541 tggcgcggcc cggagtcgga agcagctcgc ctgattgggc ggatcgaggc tctgggctac
      601 cgactggtcc cgtacgatcc ggtggctctg gcggcttcgc gagacgatac cgaccgggcc
      661 ttgatccggg cgctggcggt ggccggcttc gccgcaatca acgtcatgct gatgtcgatc
      721 ggcgtctggg ctggcgatgc tgcgggtctg ttggatggca tgggtccggc aacccgggat
      781 ttactgcatc tggtgtcggc attgattgcg ctgccggcga ttgcctatgc cggccagccg
      841 ttctttcggt cggcgcttgc ggtgctgcgg cacgggcgga ccaacatgga tgtgccgatc
      901 agcctcggtg tgctgttggt ctccggcctg agcctcgtgc agacgctgtc gcatggccat
      961 aacgcgtatt tcgattctgc gatcacgctg ttgttctttc tgctgatcgg ccgcgtactg
     1021 gaccaccgtg cgcgaggtcg agtgcgagct accgcggaat tgctgctgac gttgcagtcc
     1081 actcacgtaa cggtgatcgc cgataacctc acggccgcgc gccgacccgc cagatcgttg
     1141 ctgcccggag agcgcgtgtt ggttgggatg ggtgaacgaa ttggtgtcga cggtgtggtg
     1201 gaacgaggca cttccttcgt cgacaccagt ttggtcaccg gcgaaagcct gccagttacc
     1261 gtatccacag gtgcgccagt gtttgctggc acgacgaacc tctctgcgcc gctgactgtg
     1321 cgggtcacag ccgccgagca cgggacggtg ctcgcggaat gcgcacggct gatcgaagca
     1381 tcggaggctc gccgatcccg gtttgtcgtg ctcgccgacc gggtggcacg acgttatgcg
     1441 cctgtggtgc atctcaccgc gttggcgacg ttcgttgggt ggtatgcgtg gggcggcgtc
     1501 tcactgtcgc aggcattgtt gacggcgagc gcggtgctgc tcattacttg cccgtgtgca
     1561 ttggcactgg cagtgccggt ggtgcaggtg atcgccacgg cgcgtttgtt ccgctccggc
     1621 atcttgttga agtccgggac cgcacttgag cggctggccg agatcgacac ggtggtgttc
     1681 gacaagaccg ggacattgac cgaaccattg ctggcgctgg ttcgggacgg ggtcgatccg
     1741 gtggcactac gggaggcggc atcgcttgcc gcgcacagcc ggcatccgtt agcgcgcgct
     1801 ttggtggctg ccgccgggaa cgtgccggta gtggaacagg ttgaagaaca ttcgggcctg
     1861 ggtgtttcga cccccgcgat gcagctgggg t
//
LOCUS       DATAVD010001478         2059 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_700632, whole genome shotgun sequence.
ACCESSION   DATAVD010001478 DATAVD010000000
VERSION     DATAVD010001478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_700632"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..764)
                     /locus_tag="VHX39_28340"
     CDS             complement(<1..764)
                     /locus_tag="VHX39_28340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003629138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3995102.1"
                     /translation="MNRILSFLAALGRAVIAACSVTGRVALFAGAGVSHIVRPPFYGR
                     LFLKALVDIGYFSLPVVAMTAVFTGMVLALQSYTGFSRFAAQSAVANLVVLSMTRELG
                     PVLAGLMVAGRVGAAMAAELGTMRVTDQIDALTTLSTNPMKYLVAPRLLAGTIALPLL
                     VVIADVLGVMGGFIVSVLKLGFNQNVYLTNTMNFVQSDDVISGLVKAGVFGFIIALMG
                     CYQGYNSKGGAQGVGAATTAAVVSASILILASDYVLT"
     gene            complement(761..1852)
                     /gene="alr"
                     /locus_tag="VHX39_28345"
     CDS             complement(761..1852)
                     /gene="alr"
                     /locus_tag="VHX39_28345"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEX3995103.1"
                     /translation="MGPDAAHAVLTVDLGAIVANWRLLQAKHVSAATGAVVKANGYGL
                     GAVPVATALAAAGCRHFFVATPDEALTLRSTIPDATLVALGGLFAGAEQDFAEHGIIP
                     ALGSLAEIETWSRLAHRLDRALPAFVHFDTGMSRLGLDARECAVLAQDHDQLTGIDVR
                     CVMSHLVSAEMPDDPLNALQRDRFVAGRARLPPAPASLMNSAGMFLGETFGFDLARPG
                     SALYGINPAPLGNNPMRPVVTLSARVLAIREIPAGATVGYNATWTAQQPRRIATVGVG
                     YADGWHRLHSNTGVAYFDGHPVPLVGRVSMDLTTFDITDHPAIQPGSWLELLGPHRSV
                     DDAARDSGGFSYEVLTALGPRYHRVYSPA"
     gene            complement(1842..>2059)
                     /locus_tag="VHX39_28350"
     CDS             complement(1842..>2059)
                     /locus_tag="VHX39_28350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018307970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /protein_id="HEX3995104.1"
                     /translation="RMPKEVAFEGSAEKFHAAMDEWTRKMEQVHHKADLIIAKQRHGP
                     TGSIPLLFEGVYTRFADLDLVHSGHGT"
BASE COUNT          417 a          665 c          638 g          339 t
ORIGIN      
        1 gtcagcacgt agtccgacgc gaggatcagg atggaggcgc tgaccaccgc ggcggtggtg
       61 gcagcgccga caccctgtgc gccgcctttg ctgttgtagc cttggtagca gcccatcagc
      121 gcgatgatga aaccgaacac gccggccttg acaaggccgg agatcacatc gtcggactgc
      181 acgaaattca tcgtgttggt caggtaaacg ttctggttga agccaagttt caacaccgaa
      241 acaatgaagc cgcccatgac gccaagcacg tcggcgatca ccaccagcag cggcaaggcg
      301 atggtgcctg ccagcagccg cggcgcaacg aggtatttca ttggattggt cgacagagtc
      361 gtcaacgcat cgatctgatc ggtgactcgc atggtgccga gttcggccgc catggcggcg
      421 cccacgcggc cggccaccat caaaccggcc aacaccggtc ccagttctct ggtcatcgac
      481 agcacgacca gattggcgac cgcactttgc gcggcaaacc gggaaaatcc ggtgtaggac
      541 tgcaaggcca gcaccatgcc ggtgaacacg gcggtcattg ccacgaccgg caggctgaaa
      601 tagccaatgt caaccaatgc cttcagaaac agcctgccat aaaacggcgg ccgcacgata
      661 tgcgacaccc cggctccggc gaacagggca actcttccgg tcacgctgca cgcagcaatg
      721 accgcgcggc cgagcgcggc gagaaaggac agaattctgt tcacgctggt gaatagaccc
      781 gatgataccg ggggccgaga gcggtcagca cctcataact gaaccccccg gagtcgcgcg
      841 ccgcatcatc caccgagcgg tgcggcccga gcagttccag ccagcttccc ggctggatcg
      901 caggatgatc ggttatgtcg aacgttgtca ggtccatgga cacacggcct accagcggaa
      961 cggggtggcc gtcaaaatat gcgacgccgg tgttggaatg cagccggtgc caaccatcgg
     1021 catacccaac gcccaccgtc gcgatgcgtc tgggctgttg cgccgtccag gtcgcgttgt
     1081 agccgaccgt cgcgcctgcc gggatttccc gaatggccag cacccgcgcg ctcagggtta
     1141 ccaccgggcg catcggattg tttcccaatg gcgccggatt gatcccataa agcgccgatc
     1201 ctgggcgggc gaggtcgaag ccgaacgttt cgccaaggaa catcccggcg gaattcatca
     1261 ggctcgccgg ggcgggtggc agacgtgcac ggcccgccac gaaacggtcg cgttggaggg
     1321 cgttcaacgg atcgtccggc atttcggccg acaccagatg cgacatcaca caccgcacgt
     1381 cgatcccggt gagctggtca tggtcctgcg ccaacacggc acattcgcgc gcgtccagtc
     1441 cgagcctgga catgccggta tcgaaatgaa cgaacgccgg cagtgcgcgg tccagccggt
     1501 gtgccaggcg cgaccaggtc tcgatttccg ccagagaacc gagcgccggg atgatgccat
     1561 gttcggcaaa atcttgttcc gcgccggcga acaggccgcc aagcgcgacc aacgtggcgt
     1621 ccgggattgt gctgcgcagg gtcagggctt cgtccggggt cgccacgaag aaatgccggc
     1681 acccggccgc tgccaacgcg gtggcgaccg gcacggcgcc aagcccgtag ccgttcgcct
     1741 tgacgacagc gccggtcgcc gccgacacat gtttagcttg caacagtctc cagttggcga
     1801 cgatcgcacc caggtcgacg gtcaggacag cgtgtgcggc gtcaggtccc atgaccggaa
     1861 tgaacgaggt cgaggtcggc gaaccgcgtg tacacaccct cgaacagcaa cgggatcgat
     1921 ccggttggac cgtgccgctg cttggcaatg atcaggtccg ccttgtggtg cacctgttcc
     1981 attttccggg tccactcgtc cattgcagcg tgaaactttt cagcgctacc ttcgaacgcc
     2041 acttccttcg gcatacgct
//
LOCUS       DATAVD010001479         2535 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1815580, whole genome shotgun sequence.
ACCESSION   DATAVD010001479 DATAVD010000000
VERSION     DATAVD010001479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2535
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1815580"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1538)
                     /locus_tag="VHX39_28355"
     CDS             complement(<1..1538)
                     /locus_tag="VHX39_28355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010508315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FdhF/YdeP family oxidoreductase"
                     /protein_id="HEX3995105.1"
                     /translation="MAEGSSLPSEEQPVVEPPDVVFEPYDHPAGGWGALHATAKALRE
                     QSIVLKGSKALLSMNQPDGFDCPGCAWPDPKHTSSFEFCENGAKAVAFELTRRQVTRD
                     FFAAHTVTELAEHSDYWLEEQGRLTEPMRYDRATDRYVPIAWDDAFAMIAAHLDALDS
                     PDQAEFYTSGRASNEAAFLYQIFVRRFGTNNFPDCSNMCHEATSVGLPASVGIGKGTV
                     LLEDFDATDAIFVIGQNPGTNSPRMMTSLRDASRRGVPIVAINPLRERALERFAAPQS
                     PTEMVTLGSTPIASQYCQVKVGGDLALLKGVMKLVIAAHEDAIAAARPAVLDLPFITQ
                     HTTGFEALVEDLRRTSWNAILHFSGLERAQIERIARIYIEAKSCIICYGMGVTQHRRG
                     TQNVQQIANLLLMRGNFGRPGAGICPVRGHSNVQGDRTVGITETPSAALLAQIETVFG
                     FRPPQHHGHAVVDALQAMIDGRAKVFIGLGGNFVAATPDTETVRSAMRRLKLSVGINT
                     KLNRG"
     gene            1874..>2535
                     /locus_tag="VHX39_28360"
     CDS             1874..>2535
                     /locus_tag="VHX39_28360"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX3995106.1"
                     /translation="MRTRLIIVGLAIAAGAGGIAVWHAQHATAATEPTQAAPQPVPVV
                     AVKVKVSDVPIVLTGIGTVTPYNVVQVHAQVTGTIDTIGFTEGQTVHPGSLIAQLDPR
                     PFQASLQQAEAALARDSANLSATQDDLGRYTTLLKQGFATPQQVTDQSATVNELQAAI
                     AGDKAAIFNAETQLSYTTINAPISGVTGFKDVDVGNIVQPTSTTPIVTITQIQPISVV
                     FTL"
BASE COUNT          468 a          810 c          785 g          472 t
ORIGIN      
        1 ccgcggttca gtttggtgtt gatgccgacc gacagcttta gccggcgcat cgcggatcga
       61 acggtttcgg tgtcgggcgt cgcggcgacg aaattgccgc cgaggccgat aaacaccttg
      121 gcgcgtccat cgatcatcgc ctgcagcgcg tcaaccaccg cgtggccatg atgttgcggc
      181 ggtcggaagc cgaagactgt ctcgatctgc gccagcaacg cggcgcttgg ggtctcggtg
      241 atccccaccg tgcggtcgcc ctgcacgttg gaatgcccgc gcactgggca gatccccgca
      301 cctggcctgc caaaattgcc ccgcatcagc aacaggttgg cgatctgctg cacgttttga
      361 gtgccgcgcc gatgctgcgt cacacccatg ccgtagcaga ttatgcagga cttcgcttcg
      421 atatagattc gtgcgatgcg ttcgatctgc gcgcgctcca gccccgaaaa gtgcaggatg
      481 gcgttccatg acgtgcggcg cagatcttcg acaagagcct cgaacccggt ggtatgctgc
      541 gtgatgaagg gcaggtccag caccgccggc cgggccgccg cgatggcgtc ttcatgggct
      601 gcaatgacca gtttcatgac gcccttcaaa agggcaaggt cgcctccgac cttcacctgg
      661 cagtactggc tggcaatcgg cgtcgaccct aacgtcacca tctcggttgg ggattgaggt
      721 gcggcgaaac gctccagcgc gcgctcccgc aacggattga tcgcaacgat cgggacaccg
      781 cgccgcgagg catcccgcag cgaagtcatc atccggggac tgtttgtccc cgggttctgg
      841 ccgatcacga agatcgcgtc ggtggcgtcg aagtcctcaa gcaacacggt ccctttgccg
      901 atgccgacgc tcgccggcag gccgacgctg gtggcctcat ggcacatgtt cgagcaatcg
      961 gggaaattgt tggtgccgaa acggcgcaca aaaatctggt aaagaaaagc ggcttcgttc
     1021 gaagcgcggc cggacgtata gaattctgcc tgatccggac tgtccagcgc gtcaagatgt
     1081 gcggcgatca tggcaaacgc atcgtcccag gcgatcggta cgtagcggtc cgtcgccctg
     1141 tcatagcgca tcggttcagt caggcggccc tgctcttcca accagtaatc gctgtgctcg
     1201 gccaactccg tcacggtgtg agcggcaaag aagtcgcgcg tgacctgccg cctggtaagc
     1261 tcgaatgcga cggccttcgc gccgttctcg cagaactcga aggaactcgt gtgcttcgga
     1321 tcaggccagg cgcagccggg acagtcgaag ccgtccggct ggttcatcga caacagcgcc
     1381 ttggaaccct tcaggacgat gctttgctcg cgcagcgcct ttgcggtggc atgcaacgcc
     1441 ccccaccctc ccgccggatg atcatacggc tcgaagacga cgtcgggcgg ctccacgacg
     1501 ggctgttcct cggacggcaa tgacgaccct tcggccatat ttcggttctc ccctgggcag
     1561 tatagcgatg gcgtgtggca gcattcgagc agggcgaggc ccgggaaggg gccgcgtcgg
     1621 atcgaccgcc ctgacgccgg tgttccgttt gcacatggat tgtctttctg tcctgtcaag
     1681 ccggccgcgt gcctttgcgc aacatgcctg tgtgcgccga accgagttcg caaatggcat
     1741 acctctcagg cgcgcaggcg ggccgctgtc ggtgccatgc agattgctca tggtactccg
     1801 tcggaattta attttgcgtc gcacaacgcc cccccatttg gcactccgaa tgacaatgga
     1861 cggagtgcag cacgtgcgaa ctcgcctcat cattgttggt ttggctattg cggccggcgc
     1921 cggcggcatt gctgtctggc atgcgcagca cgcgacggcc gcgacggagc caacacaagc
     1981 ggccccccag ccggtgcccg tcgtggcagt gaaggtgaag gtttcggacg tgccgatcgt
     2041 gctgaccggc atcggcaccg tgacgccgta caacgtggtg caggttcacg cgcaggtgac
     2101 cggtacgatc gacactatcg gcttcaccga gggacagacc gtgcatcccg gcagcctgat
     2161 cgcgcaactc gatccacggc cgttccaggc gtctttgcag caggcggaag cagcgctggc
     2221 gcgcgacagc gccaaccttt ccgccacgca ggacgatctc ggccgctata ccacactgct
     2281 gaaacagggc ttcgcgacac cgcagcaggt caccgaccag agcgcgacgg tcaatgaact
     2341 gcaggcggcc atcgccggcg ataaggcggc gattttcaat gccgagacgc agctcagcta
     2401 caccacgatc aatgcgccga tcagtggcgt gaccgggttc aaggacgtcg atgtcggcaa
     2461 catcgtgcag ccgacttcga ccacgccgat cgtcacgatc acccagatcc agccgatatc
     2521 ggttgtcttc acgct
//
LOCUS       DATAVD010001480         5559 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1630349, whole genome shotgun sequence.
ACCESSION   DATAVD010001480 DATAVD010000000
VERSION     DATAVD010001480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5559
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1630349"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..653)
                     /locus_tag="VHX39_28365"
     CDS             complement(<1..653)
                     /locus_tag="VHX39_28365"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEX3995107.1"
                     /translation="MPRAVALLLGSLGISGLIWVIDPFITTDLSGWVRSLLDAAPLPE
                     VLLNLVLGLMLFAASLHVDLTELRRQKWVILGLATAAVIIATIVFGAGIWVVFQFVGA
                     QVPLPWCMVLGALLAPTDAVVVDALLRRAPLPSALKVAITGESLFNDGAGVVMFNIML
                     GLAEGQHDLIGHGRVAMALAIGGIGGGLLGCATGFIASRMMRWADDLGLWLMISFTLV
                     "
     gene            complement(1416..4295)
                     /locus_tag="VHX39_28370"
     CDS             complement(1416..4295)
                     /locus_tag="VHX39_28370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995108.1"
                     /translation="MSRKTRWIFAVSALLSFAVPAFAQQPSQEQISAIRGACRGDYMS
                     VCASVPTGGSEALQCLKQHSADVSNGCRDALAAVGGSPPPVTTAAAASNPQLPQPLPP
                     DYIAGQAAAQSSWPHTITREGATVTVYQPQAVQWPDHQTLTARAAIAIVQPGQSKPVL
                     GTIELTLATQTDDATGIVHLSDPKLLNSHFPSLDTKQAQDLQAKISADLPTMETHQVP
                     LGAILLSLGQPPIASVPVSNDPPEIFAADHPASLVVFDGDPVLVPVGTTGLTVAVNTN
                     WDVFVDQGTWYLLNSGVWFSAPQRDGPYALAAQLPPEFNKLPNDGNFANVRKSIPARP
                     AAAGYRAPQIFVSTKPAEIIVTDGAPAFQPVTGTTLQRVTNTSSVLYFDPAQSNFYVQ
                     LSGRWFSASALAGPWEYATDNLPADFALIPPDSPDAAILPSVPGTVPAQEAVLQAQIP
                     TTTTVQRKSATLTVVWSGPPRFAPIPGTSIEAAVNTNVEMLKIGSAYYVCDKGIWYVG
                     TTPNGPWALADSIPPAVRKIPPKSPHYHLAYAQIYAATATAVTYGYTAGYLMGYVSSG
                     VLVYGTGYYYPPVVIAGATPIYYPYPYTYAGSVWYNSNTGAWARGGAVYGPNGGVARG
                     GTYYNPTTGAYAAGGAVYGPNGGAGAWSAYNPSTGSYAHGSASWNNGSGSASGSYYNA
                     RTGVSGSTNQSWTPYGRNGSSTFTGPTQTVNTKSGANANGRAGGFSSTTGAEGAGYHN
                     NVTGNNGGAVKTQNGDVYAGHDGNVYRNTGSGWQKYDNGSWNSVQPPDRNADNTNSRN
                     NNNTNTAGNTNTNTASNNNTFGSSNNSNAPGSSNNASNSRNNNQTSGNQASNNRNSNQ
                     NSGNQASNTRNSNQTSGNQASNSRNNSNQSTNNAKNGRSGANSGARQGNQSNRNNRME
                     SSNYHQLEQDRLGRQFGGGGGGGRFGRGGGGGGGFGGGGRFGGRR"
     gene            complement(4636..4902)
                     /locus_tag="VHX39_28375"
     CDS             complement(4636..4902)
                     /locus_tag="VHX39_28375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995109.1"
                     /translation="MKAFLGIVMAAALISPSALISPSQAAPTVVAATSSASSIILVEG
                     GCGHDYHRDDRGYCRPNWREYQPAWRACPPGWHLGSEGHRCWPN"
     gene            complement(5125..>5559)
                     /locus_tag="VHX39_28380"
     CDS             complement(5125..>5559)
                     /locus_tag="VHX39_28380"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3995110.1"
                     /translation="AVGSELDLGNGVTVRTAMLQHPGGCVGYRIEWAGRAMVYATDTA
                     YGDPSTDLALRALCHGAGLLIYDAMFTDDEFASRRAWGHSTWREGVRLADQCGVRQLV
                     LFHHAPSRDDKGVASLVAEAAAVRPRTIAAREGLELTVHRSG"
BASE COUNT         1043 a         1729 c         1735 g         1052 t
ORIGIN      
        1 accaaagtga acgagatcat cagccacagg cccagatcgt cggcccagcg catcattcga
       61 gacgcgatga agccggtggc gcaacccagc aggccgccgc cgatgccgcc aatcgccagc
      121 gccatggcaa cccggccgtg accgatcaga tcgtgctgcc cctcggccaa acccagcatg
      181 atgttgaaca tgacgacgcc ggcgccgtcg ttgaacaagc tctccccggt tatggcgacc
      241 ttcagggcgg atggcagcgg cgcgcggcgc aacagagcgt ccaccacgac ggcgtccgtc
      301 ggcgccagta acgcccccag taccatgcac caggggagtg gcacctgggc gccgacaaac
      361 tgaaacacca cccagatccc ggcgccgaac acgatcgtgg caatgatcac tgcggcggtc
      421 gccagtccca gaatgaccca cttttgccgt cgcagttctg tcagatcgac atgcaggctg
      481 gcagcgaaca acatcaggcc gagcaccagg ttcaacaaaa cttcaggcag tggtgcggca
      541 tccagcaggc tgcggaccca gcctgaaaga tccgttgtga tgaacggatc gatgacccag
      601 atcagaccgg aaatgccgag cgacccaagc agcagcgcga cggcgcgcgg catgcggaca
      661 aaacgatgat taaccgtcgc aacaactgct gcgagcccca gaagcatcgt tacaagatcg
      721 gcggacgagg ccatggcatc gaggatacaa gatgaccgag gttcatcaag cgggaccttg
      781 ccagccccgg attggttcgg gaacggaaag gccgcgggca cccctccccc ggacggcgtt
      841 gccgatcaac aggccgagcg gcgagcgccc cgttcaacgc ccgaagctgg ctagcgaaaa
      901 cgagccgcag cggattgcaa agccgaacgg cacatcggtt gcaattgagg cccgcgcgac
      961 acgaggcagc cgatcgcgcg gcctccgcca ggctgcaccc cggaacagta tctttggtag
     1021 tcgctgccgc aatcaacccg caacaggcgg acttctgccc gcatcggcat tggtcctggc
     1081 attggcagcg gcctggcagc cggcatcgcg gctggctgtg tggccgaagg catctgagaa
     1141 ccgcctgggg tgaccgcggc caatgccgac tgacatcccc ccgacacctg cgaggaatgt
     1201 tgctgcaggc attgcaacgc cggcatgcca ccggttggca cgctggcgca aacgctcatg
     1261 tagtcgccgc ggcacgcgct tttgatggcg ctcgcctgct gcggtgttgg ttgctgcgcc
     1321 agagattgcc cagagcaaag aaccagtgcg atcagggcca tggccccatg gaatttgttg
     1381 atcaacgacc catccccccg gattcgaatt caggattacc gtctgccgcc gaagcggcct
     1441 ccgccgccaa agcctccgcc cccgccgcca cctcggccga agcggccgcc gcccccgcca
     1501 ccgccaaatt gccggccgag acgatcctgc tccaactggt ggtaattgct gctttccatt
     1561 cggttgttgc gattggactg attcccttgc cgcgcgcccg aatttgcacc cgagcgcccg
     1621 ttcttcgcgt tgttcgtgct ctgattggaa ttatttcggc tattcgatgc ctgattgccg
     1681 gaggtctgat tgctgttccg ggtattcgaa gcctggttcc cggagttctg attgctgttc
     1741 cggttattcg aagcctggtt gccagaggtc tgattgttgt tccgactatt cgaagcgttg
     1801 ttgctcgaac ccggcgcgtt gctgttgttg ctcgacccaa acgtgttgtt gttgctggcg
     1861 gtgttcgtat tggtgttgcc ggcagtgttc gtattgttgt tgtttcgtga attcgtattg
     1921 tcggcgttgc gatcgggcgg ttgcaccgaa ttccacgaac cgttgtcata tttctgccaa
     1981 ccgctgccgg tgttccggta aacattgccg tcgtggccgg cataaacatc gccgttctgt
     2041 gttttgaccg cgccgccatt gttgccggtt acattgttgt gatagccggc cccttccgct
     2101 ccggtcgtcg aactgaatcc gccggcccgt ccgttcgcgt tggctccgct ctttgtattc
     2161 accgtctggg tcggtcccgt gaaggtactc gaaccgttac ggccatacgg cgtccagctt
     2221 tgattggtcg atcccgacac gccggtccgt gcgttatagt aactaccgct ggcgctgcca
     2281 ctgccgttgt tccaggacgc gctgccgtgg gcatagctgc cggtgctcgg gttataggcg
     2341 gaccaggcgc cggctccgcc atttggtcca taaaccgccc cgccggcggc atatgctccg
     2401 gtcgtggggt tgtagtaagt gccgcctcgc gccacgccac cgttggggcc ataaaccgcg
     2461 ccgcctctgg cccatgctcc ggtgttggaa ttgtaccaga ccgaaccggc gtaggtgtac
     2521 ggataggggt aataaatcgg cgtcgccccg gcaatgacca ccggcggata gtaatagccg
     2581 gtgccataga cgaggacgcc ggaacttacg tagcccatca ggtagccggc agtataaccg
     2641 taagtgaccg cagtggcagt ggcggcgtaa atctgggcat aagccaaatg gtaatgcgga
     2701 cttttgggcg ggattttgcg aaccgccggc ggaatgctgt cggccaaagc ccaggggccg
     2761 ttcggcgtgg taccgacata ccagatgcct ttgtcacaaa cgtaataggc actcccgatc
     2821 ttcagcatct cgacattggt gttgaccgca gcttcgatcg aggtcccggg gattggcgcg
     2881 aaccgcggtg gtccggacca gacgacggtg agcgtcgccg atttccgctg aaccgtggtc
     2941 gtcgttggga tttgcgcctg caataccgct tcctgggcgg gcaccgtgcc ggggaccgag
     3001 ggaaggatcg ccgcgtcggg actgtcgggc gggatcagtg caaagtccgc cggcagattg
     3061 tcggtcgcat actcccaggg acccgcaagc gcgctcgccg agaaccagcg gcctgacagc
     3121 tggacgtaga aattggattg ggcgggatcg aaatacagga cgctggatgt attggtcacg
     3181 cgctgcagcg tggtgccggt gaccggctgg aacgccggcg cgccgtcagt gacgatgatt
     3241 tcggccggct tcgtgctgac aaagatctgc ggcgcgcgat agccggcggc cgcgggccgg
     3301 gccggaatac ttttccgcac gtttgcgaaa ttgccgtcat ttggcagctt gttgaactcg
     3361 ggcggcagtt gtgcagccaa cgcatacggg ccatcgcgct gcggcgccga gaaccacaca
     3421 ccgctgttga gcaaatacca ggtgccctga tcgacgaaca catcccagtt ggtattgacc
     3481 gcaaccgtca gcccagtggt cccgaccggc acgaggaccg gatcgccgtc gaacacgacg
     3541 aggctcgccg gatggtccgc agcgaagatc tcaggcggat cgttgctgac cggaaccgat
     3601 gcaatgggcg gctgtcccag actaagcagg atcgcgccca acgggacctg gtgcgtttcc
     3661 attgtcggca ggtcggcact gattttcgcc tgcaaatcct gcgcctgctt cgtgtccaac
     3721 gacggaaagt gcgaattgag caatttcgga tccgacaggt gcacaatccc tgtcgcgtcg
     3781 tccgtttgcg ttgccagtgt cagttcgatg gtgccgagaa cgggtttgct ctggccgggc
     3841 tggacgatcg caatggcggc acgagcggtg agcgtctgat ggtccggcca ctggacggcc
     3901 tggggttgat agacggtgac cgtcgcaccc tcacgcgtga tcgtgtgcgg ccaagacgac
     3961 tgggccgctg cctggccggc gatatagtcg ggcggcagcg gttgaggaag ctgcgggttg
     4021 gacgccgcag cggccgtcgt cactggcggt ggcgagccac cgaccgcggc cagcgcatca
     4081 cggcagccat tggatacgtc ggcggagtgc tgtttgaggc actggagcgc ttccgaccca
     4141 ccggtcggaa cgctggcgca gacactcata taatcgccac ggcaggcacc acgtatggcg
     4201 ctgatctgct cctggctggg ctgctgtgcg aacgccggga cggcaaacga tagcagcgcc
     4261 gaaacggcga atatccaacg cgtcttgcgg ctcatttgac cactccacga tcgggagcga
     4321 cgtgtggcgt agtaactttc ccccgtagag gcttggtagc ccgcagactg ccaggggtca
     4381 aattcggccg ccacctccat acgtcaaacg accgagcggg gatgattgcc cgagaacatc
     4441 atccccaacg ccagtcgtcc gggtaggtca tcgcgacgcc gattggttca caagcgggca
     4501 aatgcaggag ttcggccggc agtgccgtcc ctgcgccatc gaaaaacgat aaccccggca
     4561 tggtggcgtc agcgcctgtc tgcaggcatg aaacggaaga cggcgccttg cgacgccgtc
     4621 aattcaggct cctgcttagt tcggccagca gcggtggcct tccgatccaa ggtgccagcc
     4681 cggcgggcag gcacgccagg ccggctggta ttcgcgccag ttcggccggc aatagccgcg
     4741 gtcatcacgg tgatagtcgt ggccgcagcc gccttcgacc aggatgatgg aactggcgct
     4801 gctcgttgct gccaccaccg ttggcgcggc ctgagaggga gagatcagcg ccgaggggga
     4861 aatcagcgct gctgccatga caatcccgag gaatgccttc attttcgtct cctgatgacg
     4921 ccaccggcac ggtggcgatg ggtgattgca aggtggttcc ggcgttggcc gttcgccgac
     4981 cccgcctcgg actgctgcga ttcgttctcg ttttatgtaa ttggtttcac cggactctac
     5041 ctcgacaata attttgacga aattgcgccg cccttgcaac aaagaatgtc acatgtaaca
     5101 ggttgcgcgg tcgttccagg atcatcagcc gctgcgatgc accgtcagtt ccaacccttc
     5161 ccgagcggcg atcgtgcgag gtctgaccgc tgcagcctcg gccaccagtg aagccacccc
     5221 tttgtcgtcg cgagacggtg cgtgatggaa caacacgagt tgccgcaccc cgcactgatc
     5281 ggccaacctt acaccttcgc gccatgtcga gtggccccag gctctgcggc tcgcaaactc
     5341 atcgtcggtg aacattgcgt cgtagatcag caggccggcg ccgtggcaca acgcacgcag
     5401 cgcaaggtcg gttgaaggat cgccgtaggc ggtatcggtg gcatagacca tcgcccgtcc
     5461 tgcccattcg atacgatagc caacgcaccc tccgggatgc tgcaacatgg cagtccgcac
     5521 agtaacgccg ttgcccagat ccagttccga gccgacggc
//
LOCUS       DATAVD010001481         6525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3679957, whole genome shotgun sequence.
ACCESSION   DATAVD010001481 DATAVD010000000
VERSION     DATAVD010001481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6525
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3679957"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            217..2565
                     /locus_tag="VHX39_28385"
     CDS             217..2565
                     /locus_tag="VHX39_28385"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEX3995111.1"
                     /translation="MAQLQPIETDGARSVPLQGLTSVAARRRLAEVGPNAMPDTAAKL
                     WLMAFTRFWAPVPWMLELAVVVELLVGDPIQAAVIAALLVFNGLLGFMQESRAQATLE
                     ALRERLAVSASVRRDGTWQTVPAPELVPGDIVKLSLGGMVAADVRLIDGNVLLDQSTL
                     TGESLPIEGGAGHEAYAGTLVRRGEAVAEVVATGLHTKFGRTAELVRTAHVASSQQVA
                     VLRVVRNLAICNGVVIVFQAVYAGTLGMSITEIVPLLLTAILAAIPVALPAAFTLSAA
                     LGARALARQGVLPTRLSAVDEAASMDILCADKTGTLTRNELAVTDIHPMAGFDADLVL
                     GLAALASSEGGQDPVDAAIRTAAAGKPVPDLPALLRFVPFDPSRKMSEAVALAVDGSQ
                     WRIAKGACAVIFGLTPPGAEAETASEALAAHGYRILAVAAGPEAAMRLAGFIALSDPP
                     RADSAELISRLRTMGVRVVMVTGDAPTTAGIVAQAVGIKGALQPPGGDFSAVPQEAGV
                     FAGIMPEDKFHIVQALQRHGHIVGMCGDGANDAAALRQAQIGIAVSTATDVAKSAAGI
                     VLTEPGLGGIVAAVHEGRVTFQRILTYCLRSITRKTDQMLFLTAGLIMTGHAVLTPTL
                     MVLLMCTGDFLAMSAATDNVRPSPTPNVWRIDNLTVAGLIMACCNLVFCCSILAVGKF
                     YWHFETAELQTLAAVTLVFSGQSVMYVVREREHLWRSRASNWLIASSVADVSIIASLA
                     MAGIVMTALPSLVVLGVLVAAVAFAFLLDMVKLGIFARLRMV"
     gene            complement(2703..3257)
                     /locus_tag="VHX39_28390"
     CDS             complement(2703..3257)
                     /locus_tag="VHX39_28390"
                     /inference="COORDINATES: protein motif:HMM:NF024802.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase C-terminal
                     domain-containing protein"
                     /protein_id="HEX3995112.1"
                     /translation="MPIIVDGDRVAHDFWYIARHPEKRFPDRPSLFGGDVGVGLTRHI
                     NVWSDMTLGTAIRRLIAADFIYCLAPEDRAYYRRSREAQFGCTLEAYCADRDRWLGEF
                     AATIAPLQQTLSEQPYLAGAEPAYADYVVFSVFQYARPGNPHELLPTGTAVRRWRDAI
                     VAHFDRLGDCYPAYPQQRNGPDGR"
     gene            3584..4306
                     /locus_tag="VHX39_28395"
     CDS             3584..4306
                     /locus_tag="VHX39_28395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX3995113.1"
                     /translation="MVTISSMAEVASLVGEPARAAMLQAMMDGRALTAGELAGVANIT
                     PQTASAHLNQLCVSGLVSVMQQGRYRYHRLATPQVAQLLENLMLVAAGPLTPRIRTGP
                     RDVPLRTARTCYDHIAGQLGVGIADAMKQQGFVELDDDAGVLTASGDEFLVRQGIVLD
                     RSPETRRTNTLPLCRLCLDWSERRPHLSGRLGAELCRHSLAIGWIRKRQGSRAVDVTP
                     EGRRVFRDIFRLEMYRELAMAG"
     gene            complement(4319..5521)
                     /locus_tag="VHX39_28400"
     CDS             complement(4319..5521)
                     /locus_tag="VHX39_28400"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995114.1"
                     /translation="MTLAATTPRPEASAKLSHLPPMPWALLAAGALAMFAAASSGTTR
                     APFLLDMARDLSTSMPYVADLVAATSISWAVAGMLAGAGSDRWGRRPFLLAGPLALTF
                     ALLGIATAPSFLQVVLWSVAAGGCSGMFTGVIFAEISSRVAEGQQGRALGWVMSGQSL
                     TLLIGVPVAAFVGSIIGWRGVNVCIGGLAAVSALGLLATTRGQPKSSRPAGARPPSTR
                     AALSWPVLRLLAMGIAERVCYGLTVVYFATFLQTTYLVGLDAVALPLAIFASGNILGT
                     VLGGQLADRLPNRLMIYAVAMVTSGIASLALFGWQESVTMSVALGFLYVFLNAIARPA
                     MMAALAQVPPHVRGTVMGWNVTCSSIGWMGAAGLGGWMLGVQGFAGFGVLTAVVAVIG
                     ACLALFRR"
     gene            complement(5535..>6525)
                     /locus_tag="VHX39_28405"
     CDS             complement(5535..>6525)
                     /locus_tag="VHX39_28405"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX3995115.1"
                     /translation="AEQWVLPVMPTHRRPHLFDAFHPNYGGYMASRVHADTLAEMKKS
                     DLLVALGERITGSLSQGFTFPAAPDPQLPLVHVWPDANEVGRVWRPDLGMACEPAAVV
                     RALLAKGAPKDASKRQAWVAKLNETHKRVTKPEWQPTPDGVNFSAVIAEINKHLTDDA
                     TVTSDAGNFATFVHRYLLMKPGQMFLASVVGAMGSGMPMGVAACLRRPGTQVIAFAGD
                     GGALMTGNELATARQYGVNPVFIVSDNNCYGTITQHHDMRYPGRPYQAATQLTNPDFA
                     VWATAFGAKGLTIHTEADIAGVITEALSTKDRPVVVHVHTSLEQISAWRRRSG"
BASE COUNT         1214 a         1991 c         2136 g         1184 t
ORIGIN      
        1 gtgtatcaac gtgaaaccgg aagcactccg gctgtttctc catgaactgc ccgctaaagg
       61 caaaattccg ctttatgttc tgcctgagga cgcgagtcag accgcgatgt acctgacccc
      121 acacgcctcg tcgtgatgag gcgacgccag ccgtaacgat cggcacggcg gcacccgcgc
      181 tttcgccatt cggggaataa tgccaacaaa gcgccaatgg cgcagttgca accgatcgag
      241 accgatggtg cccgcagcgt cccactccag ggcctgacga gtgtggcggc gcgtcgccgc
      301 cttgccgagg tcgggccgaa cgccatgccg gataccgcag cgaagctgtg gctcatggcg
      361 ttcacccggt tctgggcgcc agtgccctgg atgctggaac tggcggtcgt ggtcgaactc
      421 ctggttggcg atccgatcca ggcggcagtc attgccgcgc tgttggtgtt caacgggctt
      481 ctaggattta tgcaggaaag ccgagcccag gcgacgctcg aggcgttgcg cgagcggctg
      541 gccgtaagtg catctgtgcg gcgcgacggc acctggcaga cggtgccggc gcccgagttg
      601 gtgccgggcg acatcgtgaa attgtcattg ggtggcatgg tcgcggcgga tgtgcggctg
      661 attgacggga acgtgctgct tgatcaatcg actttgaccg gggaatcgtt gccgatcgag
      721 ggcggcgcgg gtcacgaggc ctatgccggt acgctggtgc gccggggcga ggcagttgcc
      781 gaagtggtgg cgacgggcct ccacaccaaa ttcggccgca ccgcggagtt ggtgcgcacg
      841 gcacatgtcg ccagttcaca acaagtggcg gtgctgcgcg tggtgcgcaa tctggcgatc
      901 tgcaacggcg tggtgatcgt gttccaggcg gtctatgccg ggacactcgg gatgtcgata
      961 accgaaattg tgccgctgtt gctgactgcg atcctggcgg cgatccctgt ggcgctgccg
     1021 gcggcgttca cactgtccgc cgcgttgggc gctcgggcgc tggctcggca aggcgttctg
     1081 ccgacccggc tgtctgccgt cgatgaggcg gcatcgatgg atatactttg cgccgacaag
     1141 acgggcaccc tgacccgcaa cgagttggcg gtgaccgata ttcacccgat ggcgggcttt
     1201 gatgccgacc tggtactcgg cctggcggct ttggccagct ccgagggtgg gcaggatccg
     1261 gtcgatgctg cgatccgcac tgccgccgcc gggaagccgg tcccggacct gccggcactg
     1321 ctgcggttcg tgcccttcga tccatcgcgg aaaatgtcgg aagctgtcgc gttggccgtc
     1381 gatggcagcc agtggcgaat tgccaaaggc gcctgcgctg tgattttcgg tctgacgcca
     1441 ccgggcgcgg aagccgagac cgcgtcggag gctctggcgg cacatggtta ccgcattctg
     1501 gcggtcgccg ccggcccgga ggcagcgatg cggctggccg gcttcatcgc cctgagcgat
     1561 ccgccgcgcg ccgactcggc agagttgatc agccgattgc gcacgatggg cgtgcgcgtg
     1621 gtcatggtga ccggcgacgc gccgaccact gccgggatcg tggcgcaggc ggtcggaatc
     1681 aagggtgcgt tgcagccgcc cggcggagat ttctccgcgg ttccacagga agccggcgtg
     1741 ttcgcgggga tcatgccgga ggataaattc cacatcgtcc aggcgttgca gcggcatggc
     1801 cacatcgtgg gaatgtgcgg cgacggcgcc aatgacgcgg ccgcgctgcg ccaggcgcaa
     1861 atcggcatcg ccgtctcgac agccaccgac gtcgcaaagt ctgcggctgg gatcgtgctc
     1921 accgagcccg gattgggcgg catcgtcgct gcggtccacg agggacgcgt cacgttccaa
     1981 cgcattctga cgtattgcct gcgttccatt acgcggaaga ccgatcagat gctgttcctg
     2041 actgcgggcc tgatcatgac gggtcacgcg gtgctgaccc cgacattgat ggtgctgctg
     2101 atgtgcacag gcgatttcct ggcgatgtcg gcggcgaccg acaacgtgcg gccatcgcca
     2161 acaccgaacg tctggcggat cgacaacctg accgtcgccg gtctgatcat ggcgtgctgc
     2221 aatctggtgt tttgctgttc cattctggca gtcggcaaat tttattggca cttcgaaact
     2281 gccgagctac agacccttgc cgccgtgacc ctggtgttca gtgggcaatc ggtcatgtac
     2341 gtggtgcggg aacgcgagca tttgtggcgt tcgcgcgcca gcaactggtt gattgcatcg
     2401 tcggttgccg atgtatcgat catcgcctca ctggcgatgg ccgggattgt gatgacagca
     2461 ttgccgtcac tggtggtact tggagtcctg gtcgctgcgg tcgcgttcgc cttcctgctc
     2521 gacatggtga agcttggcat cttcgcccgg ctcaggatgg tttgacctgc aatccgttgc
     2581 gctttcgggc actccggcga gactggtcgt tacgcgcaat caggcatagc agcgcggcct
     2641 gacccagccg caacaatggc gatggaactc cgatgacacg cttcctcata tcggtgttcc
     2701 gtttaccggc cgtcgggtcc attacgctgc tgcggatagg cggggtaaca gtcgccaagg
     2761 cgatcgaaat gcgcgactat tgcatcacgc cagcgtcgca ccgcggtgcc ggtcggcaga
     2821 agctcatgtg ggttgccagg ccgcgcgtac tggaacaccg aaaacacgac atagtcggca
     2881 taggcgggtt cggcgcctgc gagatacggc tgctcggaca gagtttgctg cagcggcgca
     2941 atcgtcgcag caaattcacc gagccaacga tcgcgatccg cacaatacgc ttccagcgtg
     3001 caaccaaact gggcttcgcg agaacggcga taataggcgc ggtcctccgg cgccaggcag
     3061 taaatgaaat cagccgcgat caggcgacgg atcgccgttc cgagcgtcat gtcggaccag
     3121 acattgatat gccgggtcag ccccaccccc acgtcgccgc caaacaaaga cggacgatcg
     3181 ggaaaccgct tttccggatg ccgcgcgatg taccagaagt cgtgggcgac acgatctcca
     3241 tccacaatga tcggcacctt gtcctgaccg ctgaggctgc ggattgtctc gacatcagcg
     3301 aatcgtacct ggcggaactc aacgtcgatc tgcttatgcg caagagccta atgaatagcc
     3361 aggaaaacgg gctgggacgc cgtccttcgt ggccgatacg ttcatacatg atcagtggca
     3421 tggcgggatc gattatcatg ttcaggttgg gaggccaatc gtgggtcgcg gtccgtgcat
     3481 cgttgcctcc tgccagatcg ccaccggcgg atgcttcgcc ctgggacgaa acattttccg
     3541 cgcggccatg ttatatgaag gcagggatac ggagcgaagt gtcatggtca cgatctcatc
     3601 gatggcggaa gtcgcctcat tggtcggcga accggcgcgc gctgccatgt tgcaggcgat
     3661 gatggacggg cgcgctctga ccgcgggcga acttgctggt gtcgccaaca tcacgccgca
     3721 aactgcaagc gcacatttga accagttgtg cgtcagcggg ctggtatcgg taatgcaaca
     3781 aggtcgctac cgctatcacc ggctggcaac accacaggtt gcgcagttgc tggagaacct
     3841 gatgctggtc gcagcgggcc cgctgacgcc gcgcatcagg acaggaccgc gcgatgtgcc
     3901 gctccgcact gcacgcacct gttacgatca catcgccgga cagctcggtg tcggcatcgc
     3961 cgatgcgatg aagcaacaag ggtttgtgga gctcgacgac gatgccggcg tgctgaccgc
     4021 aagcggggac gaatttctgg tgcgccaagg gattgtgctc gatcggtcgc cggagacgcg
     4081 ccggacgaat acattgccgc tatgccggtt gtgtctcgac tggagtgagc gcaggccgca
     4141 tttgtccggc cggcttggcg cggaactttg tcgccacagc ctggcaattg gatggatccg
     4201 gaaacggcag ggttctcgcg cggtggatgt cacgccggaa ggacgacgcg tgttccggga
     4261 tatctttcgg ctcgaaatgt accgcgaact ggcgatggcc ggctagcgcg ttgaagcctc
     4321 aacgccggaa caaggcgagg caggcaccga tcaccgccac caccgcagtc aacacgccga
     4381 atcccgcaaa tccctgaacg cctaacatcc aacccccaag tccggcggcg cccatccagc
     4441 cgatgctgga gcacgtcacg ttccacccca tcaccgtacc cctcacatgc ggcggcacct
     4501 gcgccagcgc cgccatcatc gcgggccgtg cgattgcgtt gaggaaaacg tacaagaacc
     4561 caagtgctac cgacatcgtt acgctctctt gccagccgaa caaggccagt gatgcgatgc
     4621 cggaggtcac catcgccacg gcgtaaatca ttagccggtt gggcaacctg tccgccagct
     4681 gcccgcccag tacggtgccg aggatgttgc ctgatgcgaa gatcgccagc ggcaaggcaa
     4741 cagcgtcgag accgaccagg taggtcgttt gcaaaaaggt cgcgaaatag acaaccgtca
     4801 ggccgtaaca gacccgctcg gcgatgccca ttgccagcaa tcgtagcacc ggccacgaca
     4861 atgcggcgcg ggtcgagggc gggcgagctc ccgctggacg cgacgacttt ggctggccgc
     4921 gtgttgtcgc cagcaggcca agcgcggaga ccgccgccag tccaccgatg cacacattga
     4981 cgccgcgcca gccgatgatg gagccgacaa acgctgccac cggcacaccg atcagcaagg
     5041 tcagcgactg gccgctcatg acccagccga gggcgcggcc ttgctggccc tcggcgacgc
     5101 gtgaggagat ttcggcaaag atcacgccag tgaacatgcc gctgcagccg cctgccgcca
     5161 cggaccacag cacgacctgc aggaacgatg gcgcagtggc aattccgagc agtgcaaatg
     5221 tcaacgccag cggtccggcg agcaggaatg ggcggcgtcc ccagcggtcc gatccggcgc
     5281 ctgccagcat gccggcaaca gcccaggata ttgaggtcgc agcaacgaga tcggcaacgt
     5341 acggcatgct ggtcgacagg tcgcgcgcca tgtccaacag aaacggcgcg cgggtggtac
     5401 cgctggaggc agcggcgaac atggccagcg ctccggctgc cagcaaagcc cagggcatgg
     5461 ggggcagatg ggatagtttg gcagacgcct ccggacgagg cgtggttgcg gcaagagtca
     5521 cgatggtgga acggtcagcc gcttctccgc cgccaggcgc tgatctgctc caacgaagtg
     5581 tggacgtgca cgacgaccgg ccgatccttc gtcgacagag cctcggtaat gacgccggcg
     5641 atgtcggctt cggtatggat ggtcagacct ttggctccga aagcggtagc ccaaacggcg
     5701 aagtccggat tggtcagttg cgttgcggcc tgatacgggc ggccaggata tcgcatatcg
     5761 tggtgctgcg tgatggtgcc gtaacagttg ttgtccgaaa cgatgaacac cgggttgacg
     5821 ccgtactgcc tggcggtcgc cagttcgttg ccggtcatca acgctccgcc atcgccggca
     5881 aaggcgatca cctgagtgcc gggacggcgc aggcaggccg cgacgcccat cggcattccc
     5941 gagcccatgg cacccaccac cgaggccagg aacatctggc ccggcttcat cagcaaatac
     6001 cggtgcacga atgttgcgaa gttgccggcg tccgaagtca ccgtcgcatc atcggtcagg
     6061 tgtttgttga tctcggcgat gacggcggag aaattgacgc catccggcgt gggctgccat
     6121 tccggcttcg tgacgcgttt atgggtttca ttgagtttcg caacccaggc ctgacgtttg
     6181 ctggcgtctt tcggggcacc tttggccagc agagcgcgca cgaccgctgc gggttcacac
     6241 gccatgccca gatctggtcg ccagacgcgt ccgacctcgt tggcatccgg ccagacgtgg
     6301 accaacggca gttgcgggtc aggagcggcg gggaaggtaa atccttgcga tagtgaacca
     6361 gtgatacgct cgcccaaagc gaccagcagg tcggatttct tcatttccgc cagcgtgtcg
     6421 gcgtgcacgc gggatgccat ataaccgccg tagttgggat gaaacgcatc gaacaagtgc
     6481 ggtctgcgat gggtcggcat caccggcagc acccattgtt cggca
//
LOCUS       DATAVD010001482        11235 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1630460, whole genome shotgun sequence.
ACCESSION   DATAVD010001482 DATAVD010000000
VERSION     DATAVD010001482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 11235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11235
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1630460"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            44..1018
                     /locus_tag="VHX39_28410"
     CDS             44..1018
                     /locus_tag="VHX39_28410"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3995116.1"
                     /translation="MRGRAILLLVMVWSANAAAAQVVDATGRTVQVPDHIVHVVPAGP
                     PAAVLLEAIAPDLMAGWPFPVTEDARALLPPDAAKRPQIPRVTGHEDVSRQIDALKPD
                     LILDYGTVAPRYADLARATQQRTGIPTILLDGSLAKIPDTFRELGGILHRQDRGEMLA
                     KFAEALLALPIPTNHPKVLYARGADGLLVGAPNTDVTEVFTRLGWHVLAPDGQGAFRP
                     ASIDAIKALDPDMLVFADPAMRETIARSAAWKTVRAVREGHALVAPSLPFGWIEEPPS
                     VNRLIGLAWLSGRDPVTLAALSNAVLYSRTLTSAALDAVLADVRSVHP"
     gene            1055..1780
                     /gene="modA"
                     /locus_tag="VHX39_28415"
     CDS             1055..1780
                     /gene="modA"
                     /locus_tag="VHX39_28415"
                     /EC_number="7.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX3995117.1"
                     /translation="MLLVPLAARAQTLTVFAAASLTDAMKDVSALWVKAGHPALTMSF
                     GASSTLARQIEQGAPANLFASADEKWMDYVAKKNLIVPSTRQDLLGNDLVLVVPANKP
                     LHVTIGQNFNLAGLLGASGRLAVGDPAHVPVGIYAEQALKKLGLWDSIEPRLARTADV
                     RSGLLLVERGEAPAGIVYRTDAAVSKAVMVAGTFPASSHDPITYPFAVTKAGDTPDAR
                     ALLKFLAGPQARAAFAQRGFKVE"
     gene            1956..2912
                     /locus_tag="VHX39_28420"
     CDS             1956..2912
                     /locus_tag="VHX39_28420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010513520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin family protein"
                     /protein_id="HEX3995118.1"
                     /translation="MRNFSELTEREILALAIANEEEDGRIYLDIAEGLREEYPGSANV
                     FTEMAGEEGEHRHRLLEVYRSKFGEHIPLIRRQDVRGFVHHKPVWQMTPLNLDAVRSL
                     AESLETETQRFYRRAAARSEDVTIRKLLGDLADAEVEHEHRADQLVEENLPANIRRAE
                     DAHARQSFVLRIVQPGLAGLMDGSVSTLAPVFAAAFASNNTWQTFLVGLAASVGAGIS
                     MGFAEALSDNGSLTGRGAPLIRGAICGLMTTAGGIGHTLPFLIPTFWTAMMVAIAVVI
                     VELAVISWVRWKYMDTPPLSATLQVAFGGALVFSVGILIGSS"
     gene            complement(2920..3486)
                     /locus_tag="VHX39_28425"
     CDS             complement(2920..3486)
                     /locus_tag="VHX39_28425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995119.1"
                     /translation="MSDTAASTQSPERLHALAIAALVPFFVDGPTRDVKAARRVAEGL
                     LTDYRAGTPKELQLATQIVALGWAALACLRAAAAVKDLSIDAMLDLQDDAILLNRLAL
                     KATKALAVRQKERAKNPRAMTLENTKWDEGAFQLAINQSLDKYNEANAQLAANMASLE
                     PVAPKTKLTILSAEQMTPIVLARRAEAN"
     gene            3613..4641
                     /locus_tag="VHX39_28430"
     CDS             3613..4641
                     /locus_tag="VHX39_28430"
                     /inference="COORDINATES: protein motif:HMM:NF005757.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3995120.1"
                     /translation="MTWPTQQGTFEAGDITLQSGARLPSARLSWKTHGTLSPDRDNVI
                     IYPTSYGAQHPDLEWLIGPDKILDPDRWFIVIPDMFGNGLSSSPSDTDDYPTLITIHD
                     NVQTQSRALSALFGIDRVACVYGWSMGALQAYHWAALFPSQVDRIVVNCGVARTSVHN
                     QVFLRSLMATLEGAPQHIGNGRFSAEPRAAKRAFGRIYAAWALSQDFYRAGLHLADGP
                     APNLGAPDLETFLKTDWEDRFGARPAANLYAQLRTWDAADIAANDLYDGDLAAALRAI
                     KARVLLMPGATDLYFRTADNQAELPFLANATLRPIPSIWGHRAGNPVANPTDMLFIQN
                     EVRAHLAQ"
     gene            4658..5050
                     /locus_tag="VHX39_28435"
     CDS             4658..5050
                     /locus_tag="VHX39_28435"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEX3995121.1"
                     /translation="MAAEVTRSNPPAVRAPTGYTHAIQITGDYRRLIISGQVGIAPDG
                     TIPGNAEGQIAQAFANLRAVLAANGMTLANIVKTTAFLTDRDLLPIYRQARGAAFGDQ
                     APPASTLLFVAGLADPAWVVEIEAEAVA"
     gene            5052..6548
                     /locus_tag="VHX39_28440"
     CDS             5052..6548
                     /locus_tag="VHX39_28440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acyl-CoA synthetase"
                     /protein_id="HEX3995122.1"
                     /translation="MNLIRRNTVGDAIRRAARLFRGRSALVFGDRDWSFNALDRAADR
                     VAGHFTGLGLNAGDRIAAYGRNSDAYFIAWLACVRGGFVHVPVNYALTGEELSYIVRQ
                     SGSRLVLFGAGLEANLAGIDVTTGPLNDLVTVALNPDVPIGSDPDLDDDTLAQIVYTS
                     GTTAAPKGAMMTHKAMLSQYYSVIHNMDYAESDRALAALPLYHTAQTHAFTMPQLLVG
                     ARNILIEAPVPDVVLRLIEQERITSFFAPPTVWISLLRHPDFATRDLSSLEKVYYGAS
                     IMPVPVLNELRDRLPRARPYNCYGQTEIAPLATVLRPEEHDARPASCGRPCLNVETRV
                     VDPDMNDVLPGTHGEIVHRSPHLLTGYWDKPAETAEAFAGGWFHSGDVGYFDEEGYLY
                     IVDRIRDVINTGGVLVASREVEEILFTHPAVSEVAVVGLPDDKWIEAVTAFVVLRPGH
                     ATDEATLVALAREHLASYKLPKKVVFVDNLPRNTAGKLLKRELRKQYG"
     gene            6645..7814
                     /locus_tag="VHX39_28445"
     CDS             6645..7814
                     /locus_tag="VHX39_28445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3995123.1"
                     /translation="MNLRKSLAALALAVALTGGASAAEPVKVGLVLALTGPFGAYGKQ
                     IEHGVELYLKTNGDTFGGRKIQLVIKDDSPGTAGDVSKRLAQELVVQDKVDILAGFTL
                     TPSAFAVAPIATEAKKPMVVMNAATSAITTKSPYIIRTSMTLPQNTAPMASWAAKNGI
                     KKVFILVADYGPGYDAEGQFKKTFEAAGGQIVGDVRAPVKNPDYGPFLERIKDSKPDA
                     VFLFLPPGAGTIAFMKGFEERGLAKAGIKMIATGDLTDEEILDSIGDVALGMITSFHY
                     SEAHKSPENAAYTAAYHKAYPNDRPDFMSVAGYDGMHLIAAVLDKTHGSTDADAFVAA
                     AKGMKWISPRGPISIDPETRDIVQNIYIRKVEKVGGKLQNVEFDHVSAFKDPGKQ"
     gene            7887..8744
                     /locus_tag="VHX39_28450"
     CDS             7887..8744
                     /locus_tag="VHX39_28450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3995124.1"
                     /translation="MTVLFDGIASGLLLFLISVGLSVTLGLMNFVNLAHGAFAMLGGY
                     VCVVLLNHFGVPFLATLPIAMIVSALVGIVLERTLYRRLYGAPHLDQVLFSIGLVFMS
                     ISTANYFFGDHQQPLHLPPMLSGQFHLAGADIGAYRLFLIVVGLVLAGGLQWLVSGTK
                     FGASLRAAVDNPRIARGLGIDVDRVFVITFALGTALAALGGALGIEMLGLDPEFPITY
                     IVYFLIVVAVGGSGNIKGSLIASLILGICDVEGKYYVPQIGAFVIYLVMVVTLIFRPQ
                     GLFGRSATK"
     gene            8741..9727
                     /locus_tag="VHX39_28455"
     CDS             8741..9727
                     /locus_tag="VHX39_28455"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3995125.1"
                     /translation="MTKAAFDAGKLRDASRWHPAEYAFWILPIAAYFVFPDNLALLAQ
                     IAIAALFAISLDLILGYAGIVSLGHAAFFGIGAYAAGLLAQAGWGDPILGLTCATLAA
                     AATGFVTSFLVLRGADLTRLMVTLGVASMLYVSANKLTDITGGLDGLQGVEMKPIFGW
                     FAFDLYGKTAYIYCTVALFAMFWIARRIVNSPFGLSLQGIRQNAARMPALGTPVNARL
                     VAVYTLGAAYAGVAGALLTQTTQFVSIDVFSFSRSAEVLLILVLGGIGSLYGGILGAV
                     VFMTVHEYLSGIDPLYWQFWLGMLLIVVVLFARGGILGALRAASRTLPGFRT"
     gene            9724..10476
                     /locus_tag="VHX39_28460"
     CDS             9724..10476
                     /locus_tag="VHX39_28460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3995126.1"
                     /translation="MNHALQTRSLSKRFGGFLATNNVTLDIAEGARHALIGPNGAGKT
                     TLINLLTGVLEPTSGSVILKGQDVTRQAQHRRVKRGLARTFQINRLFADMTALQSVTL
                     AVNERRGIAAHWWRPISAHGEAIDDAASLLTQLGLLDVAHVRTKDLPYGKQRLIEIAL
                     ALAARPAVLLLDEPAAGVPTGESRALFETIAQLPRTVTVLLIEHDMDLVFRFADRISV
                     LVAGALLTEDVPDVIAADPRVREVYLGTAGRG"
     gene            10523..11176
                     /locus_tag="VHX39_28465"
     CDS             10523..11176
                     /locus_tag="VHX39_28465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3995127.1"
                     /translation="MLEDITFSLEPGASLALLGRNGMGKTTLLATLMGATRQLRGHIR
                     FDNQNLGTQPSHRRAHAGLGWVPQERDIFPSLSVEENLTVVARPGPWGLQKVYATFPR
                     LRERRTNMGNQLSGGEQQMLALARALMLNPRLLLLDEPLEGLAPLIVQELLSSIAQMT
                     RDGDMAVILVEQHAQQILPITRDALVLERGRVVHYGPSDELAADPAVLDRWLGVAAH"
BASE COUNT         2029 a         3867 c         3281 g         2058 t
ORIGIN      
        1 ttatgtctga cggactatat cgtagaccca cggggtgaac agcatgcgcg gtcgcgcgat
       61 cctgcttctg gtgatggtgt ggtcggccaa cgcagccgcg gctcaggtcg tcgacgcgac
      121 aggccgcact gtgcaggtgc cggaccacat cgtccatgtc gtacctgccg ggccaccggc
      181 cgctgtcctt ctggaagcca tcgctccgga cctgatggcg ggttggccct tccccgtaac
      241 ggaagatgca cgcgcgctgt tgccgccgga cgccgcgaaa cggccgcaga ttccacgcgt
      301 gaccggacat gaggacgttt cgcggcaaat tgatgccctg aaaccggacc tgatcctgga
      361 ttacggtacc gtagcgccgc gctacgcgga tctggctcgg gcgacgcagc aacgaactgg
      421 catcccgacc atcctgctcg atggttccct ggccaaaatc cccgatacct ttcgcgaact
      481 cggcggcatc ctgcaccgcc aggaccgcgg cgagatgctg gcgaagttcg ccgaggcact
      541 cctcgcactc cccattccaa caaaccaccc gaaagtgttg tacgcacgcg gcgccgacgg
      601 ccttctggtc ggagcaccca acaccgacgt gaccgaggtc ttcacccgcc tcggctggca
      661 cgttctcgcg cccgacgggc agggcgcttt ccggccggcc agtatcgacg cgatcaaagc
      721 tcttgatcca gacatgctgg tcttcgccga tccggccatg cgcgaaacga tcgcccgatc
      781 cgcggcgtgg aaaaccgtgc gggcggtgcg ggaaggtcac gccctggtcg cccccagcct
      841 gccgttcggc tggattgagg aaccgccctc ggtcaaccgc ctgatcgggc tggcctggct
      901 cagcggccgc gacccggtaa cgctcgccgc gctgtccaac gctgttctct atagccgcac
      961 actgacgtcg gcggcacttg acgccgtgct ggcggacgtc cgttccgttc acccctgaga
     1021 ggtccaatcc atgcgtttcc tattgtttct ctgcatgctg ctcgtgcctc tggccgcacg
     1081 tgcgcagaca ttgacggtgt tcgccgcagc cagcctgacc gacgcgatga aagatgtctc
     1141 ggcactgtgg gtgaaggcgg ggcatccggc actgaccatg tcgttcggcg ccagctccac
     1201 cctcgcacga cagatcgagc aaggagcccc cgcgaacctg ttcgcctccg ccgacgagaa
     1261 gtggatggat tatgtcgcca agaaaaacct gatcgtcccc agcacacggc aggacctcct
     1321 cggcaacgac ctggttctgg tcgtccccgc gaacaaaccg cttcacgtca ccatcggcca
     1381 gaacttcaac ctggcgggcc tgcttggcgc gagtgggcgg ctagcggtcg gtgacccggc
     1441 ccacgtgccg gttggcatct acgctgaaca ggcactgaag aagctgggat tgtgggacag
     1501 catcgagccg cggctggcgc gcactgccga cgtgcgctcc ggcctgctgc tggtggaacg
     1561 cggcgaggcg cccgccggaa tcgtttaccg caccgacgca gcggtatcga aggcggtgat
     1621 ggtagcaggg accttcccgg cgagcagcca tgatccgatc acctatccgt tcgcggtgac
     1681 gaaagcgggc gacaccccgg acgctcgggc gctgctcaag ttcctggccg gtccgcaagc
     1741 gcgcgcggcg ttcgcgcaac gcggcttcaa agtcgaatag agcgccaagg gagggggctg
     1801 ctcgttcccc ctccttccca gccgcatatg agcgatcact cgccctcccc cgaacatgac
     1861 gatcggggga ggcgccaacc cgacgcccct gcaactcatt cgcatcatta cgctttccac
     1921 ttgacgaagt ggccatcccg gccacattcc gcgtcatgcg caatttctca gagctgaccg
     1981 aacgcgagat cctcgccctt gccatcgcca acgaggaaga agatggccgc atctacctcg
     2041 acatcgctga aggcctgcgc gaggagtatc ccggcagcgc caatgtgttc accgagatgg
     2101 ccggcgaaga aggcgaacac cgccatcgcc tgctggaggt ctatcgcagc aagttcggcg
     2161 aacatattcc gctgatccgg cgccaagacg ttcgcggttt cgtccatcac aagcccgtct
     2221 ggcagatgac accgctaaac ctggacgccg tgcgcagcct ggcggaaagc ctggaaaccg
     2281 agacccagcg cttctatcgc cgcgccgccg cccgcagcga ggacgtcaca atccgcaaac
     2341 tgcttggcga tctcgccgac gccgaggtcg agcatgaaca ccgagcagac caactggtag
     2401 aagaaaacct gcccgccaac atacgtcgcg ccgaagatgc ccacgcccgc caatccttcg
     2461 tcctgcggat tgttcagccg ggcctggctg gactgatgga tgggtccgta tccacccttg
     2521 cgccggtatt cgccgcggcc ttcgcgtcca acaacacgtg gcagacattc ctggtcgggc
     2581 tggcggcatc ggtcggtgcc ggcatctcga tgggcttcgc cgaagcattg tcggacaacg
     2641 gcagcctgac cggccgaggt gcgccattga ttcgcggcgc catctgcggg ctgatgacca
     2701 cagccggagg aatcggccac acgctgccat tcctcatccc taccttctgg accgcgatga
     2761 tggtggcaat cgccgtggtg attgtggaac tggccgtgat ctcctgggtg cggtggaaat
     2821 acatggacac cccaccgctg tcggcaacgc ttcaggtggc gttcggcggg gcgctggtgt
     2881 tcagcgtcgg gattctgatc ggcagcagtt gacgcagcct cagttggctt cggcccgacg
     2941 tgccaggaca atgggggtca tctgttcggc ggataggatc gtcagctttg ttttcggcgc
     3001 aacgggttcc agcgacgcca tgttggctgc caattgggcg ttcgcctcgt tgtatttgtc
     3061 caacgactgg ttgatggcca gttgaaacgc gccttcgtcc cacttcgtat tctccagagt
     3121 catcgcccgg ggatttttcg cccgttcttt ctgcctaacc gccagcgctt tcgttgcttt
     3181 cagagcgagg cggttcagca ggatggcgtc gtcctgcaaa tccagcatag catcgatcga
     3241 caggtccttt accgccgccg cggcccgcag gcaggccaac gccgcccaac caagcgctac
     3301 gatctgggtg gcaagctgca gttccttcgg cgtgccggcg cggtaatcgg tcagcaagcc
     3361 ctcggcgacg cggcgggccg cctttacgtc ccttgtcgga ccatcgacaa agaatggcac
     3421 gagggcggca atcgccaagg catgcaaacg ctcgggagac tgggtggaag cggcggtgtc
     3481 actcatacgt atgttcttca tttgttcgca tagtttctac gccagacagc agttcgagcg
     3541 caagcaaaaa acgcgctgcc caacgtcggt cccctgtccc ataatgccgc cgggacgaaa
     3601 cacggagcct ccatgacctg gccaacgcag caaggcacgt tcgaagccgg agacatcacg
     3661 ctccaatccg gcgcccgcct gccctccgcc cgcctgtcct ggaagaccca cggcacgctg
     3721 tccccagacc gcgacaacgt catcatctac ccgaccagct acggcgcgca gcacccggat
     3781 ctggaatggc tgatcggtcc cgacaaaatc ctggacccgg atcgctggtt catcgtcatc
     3841 cccgacatgt tcggcaacgg cctgtcgtcc tcaccgtccg acacggacga ctaccccacg
     3901 ctgatcacca tccacgacaa cgtacaaacg caaagtcgag cactctccgc gctgttcggc
     3961 atcgaccgtg tcgcctgcgt ctatggatgg tcgatgggcg ctttgcaggc ctaccactgg
     4021 gccgcgctgt tcccctccca ggtagaccgc atcgtcgtga attgcggcgt cgcccgcaca
     4081 tccgtgcaca accaggtctt cctgcgttcg ctgatggcaa cactggaagg cgcaccacaa
     4141 cacatcggca atggccgctt ctccgccgaa ccgcgtgccg cgaaacgcgc cttcggccgg
     4201 atttacgccg cctgggcact aagccaggac ttctaccggg ccggcctgca cctggccgac
     4261 ggccccgccc ccaacctggg cgcacctgat ctggaaacct ttctgaaaac cgattgggag
     4321 gaccgcttcg gcgcccgccc ggccgcgaac ctgtatgcgc agcttcgcac ctgggacgcc
     4381 gccgacatcg ccgccaacga cctctacgac ggcgacctgg ccgcggcgtt gcgcgccatc
     4441 aaggcccgtg tcctgttgat gcccggcgcg accgatctgt atttccgtac cgccgacaac
     4501 caggcagaac tgccgttcct agccaacgcc acattgcggc cgatccccag catctggggc
     4561 caccgcgccg gcaatccggt tgcaaatccg accgatatgc tgttcatcca gaacgaagtg
     4621 cgagcccacc tcgcccaata aaacagggag atacgacatg gccgccgagg tcacccgcag
     4681 caacccgccc gctgttcgcg caccgaccgg gtatacccac gcaatccaga tcaccgggga
     4741 ctaccggcgc ctgatcatct ccggccaggt cggtatcgcg ccggacggca ccattcctgg
     4801 caacgccgag ggccagatcg cccaggcctt cgccaatctc cgcgccgtcc tggccgccaa
     4861 cggcatgacg ctggccaata tcgtcaagac caccgctttc ctcaccgatc gagacctgct
     4921 gccgatctat cgccaggccc gcggcgcggc gttcggtgat caggcaccgc cggcctcgac
     4981 cctgctgttt gtcgccggtc tggcggaccc agcttgggta gtggaaatcg aagccgaagc
     5041 ggtggcgtga catgaacctg atccgccgca acaccgtcgg cgatgcgatc cgccgagccg
     5101 cgaggctgtt ccgcggtcgt tcggcattgg tgttcgggga tcgcgactgg tcgttcaatg
     5161 ccctggatcg cgccgccgac cgggtggcgg gccatttcac cggcctcggc ctgaacgccg
     5221 gtgaccggat cgccgcctac ggccggaact ccgacgcgta tttcatcgcc tggctggcat
     5281 gcgtccgcgg cggcttcgtg catgtgccag tgaattatgc gctgaccggc gaggaactgt
     5341 cctacatcgt gcggcaatcc ggctcccgcc tcgtgctgtt cggcgccggc ctggaagcaa
     5401 accttgccgg gatagacgtc accaccggcc cgctgaatga ccttgtcacc gtcgcactga
     5461 atcccgatgt acccatcggt tccgaccccg atctggacga cgacaccctg gcgcagatcg
     5521 tctatacatc cggcaccacc gccgcgccca agggcgcgat gatgacgcac aaggcgatgc
     5581 tgtcccagta ttactcggtc attcacaaca tggattatgc cgagtccgac cgagccctcg
     5641 cggccttgcc gctgtatcat acggcgcaga cccacgcctt caccatgccg cagcttctcg
     5701 tcggcgcccg caacatcctg atcgaggcgc cggtgccgga cgtcgtgctg cggctgatcg
     5761 agcaggagcg cattacctca ttcttcgcgc cgccgacggt ttggatcagc ctgttacggc
     5821 accccgactt cgccacgcgc gacttgtcgt cgctggaaaa agtctattac ggcgcctcga
     5881 tcatgccggt tccagtgctg aacgaactgc gcgaccgcct tccgcgcgcg cgtccctaca
     5941 actgttacgg ccagaccgag atcgcgccgc tcgccaccgt gctgcggccg gaggaacatg
     6001 acgcccgccc agcctcctgc ggtcgcccct gcctgaacgt cgaaacccgt gtggtcgacc
     6061 ccgacatgaa cgacgtactg ccgggtacgc acggcgaaat cgtccaccgt tcgccgcatc
     6121 tgctgaccgg ctactgggac aagccagcgg aaaccgccga agccttcgcc ggcggctggt
     6181 ttcactccgg cgacgtcggc tacttcgatg aggaaggcta cctctacatc gtcgatcgca
     6241 tccgcgacgt gatcaacacc ggcggcgtcc ttgtcgccag ccgcgaagtc gaggaaatac
     6301 tcttcaccca ccccgccgtg tcggaggtcg ccgtggtcgg cctgcccgac gacaaatgga
     6361 tcgaggcggt caccgcgttc gtcgtccttc gccccggcca cgcgacggat gaggcaacct
     6421 tggtggccct cgcccgggaa catctggcct catacaaact gccgaagaaa gtcgtgttcg
     6481 tggacaatct gccgcgcaac acggccggca aactgttgaa gcgcgaactg cggaaacaat
     6541 acggctgagg cggcatttcg tcacccatcc gcagcaaaat cgttgacacg ttccggctta
     6601 ctgtcaagtt gccgcataat gaacgaccgc agggagagaa acgtatgaac ctgagaaaaa
     6661 gcctcgccgc cctggcgctg gcagtagccc tcactggcgg cgcatcggct gccgaaccgg
     6721 tcaaggtcgg cctggtactg gccctgactg gtcccttcgg ggcctatggc aagcagatcg
     6781 agcatggggt tgaactctat ctcaagacca atggcgacac gttcggcggc cgcaagattc
     6841 aattggtcat caaggatgac agccccggca ccgccggcga cgtcagcaag cgcctcgcgc
     6901 aggaacttgt cgttcaggac aaggtcgata tcctcgccgg cttcacactg accccatcgg
     6961 ccttcgccgt ggcccccatc gccaccgagg caaaaaagcc gatggtcgtc atgaacgccg
     7021 cgacctcggc gatcaccacc aaatcgccct atatcattcg cacctccatg accctgccgc
     7081 agaacacggc gccaatggcc agttgggcgg ccaagaacgg catcaagaag gtcttcatcc
     7141 tggtggccga ctacggtccc ggctacgacg ccgaaggcca gttcaagaaa acctttgagg
     7201 ccgccggcgg ccaaatcgtc ggcgacgtgc gtgcgccggt caagaatccc gattacggac
     7261 cgttccttga acggatcaag gacagcaagc ccgacgccgt cttcctgttc ctgccgcccg
     7321 gtgcgggaac catcgcattc atgaagggct tcgaggagcg tggtctggca aaagccggca
     7381 tcaagatgat cgccaccggc gacctgaccg acgaagaaat tctcgactcc atcggcgacg
     7441 tcgcgctcgg catgatcacg tccttccact actccgaggc gcacaaatcg cccgagaacg
     7501 ccgcgtacac cgcagcctat cacaaagcct atccgaacga ccggccggac ttcatgtcgg
     7561 tcgccggcta cgacggaatg cacctgatcg ccgcggtgct ggacaaaacc cacggcagta
     7621 ccgacgccga tgcctttgtc gcagccgcca agggcatgaa atggataagc ccgcgcggtc
     7681 cgatcagcat cgaccccgaa acccgcgaca tcgtgcagaa catctatatc cgcaaggtgg
     7741 aaaaagtcgg cggcaaactg caaaacgtcg aattcgacca tgtttccgcc ttcaaggacc
     7801 ccggcaaaca gtaacgccca aagacgcgaa gcgatgcggc atcagccagg tcgcttcgcc
     7861 gccaagccac aatccgagga gccacgatga cagtcctgtt cgatggcatc gcctcgggcc
     7921 tgctgctctt cctgatcagc gttgggctgt cggtcacgct aggcctgatg aatttcgtga
     7981 acctcgccca cggcgcgttc gcgatgctgg gcggctatgt ttgtgtcgtt ctgctcaacc
     8041 atttcggcgt gcccttcctg gccacgttgc cgatcgcgat gatcgtatcg gccctggtcg
     8101 gtatcgtgct ggaacgcaca ctgtatcgtc gcctgtatgg cgccccacat ctggatcagg
     8161 tgttgttctc catcggcctg gtgtttatgt cgatctccac cgcgaactat tttttcggtg
     8221 accatcagca gcctttgcac ctgccaccca tgctgtcggg ccagtttcat ctggccgggg
     8281 ccgatatcgg tgcctatcgc ctgttcctga tcgtcgtcgg cctcgtcctc gccggcggcc
     8341 tgcagtggct ggtgtccgga accaaattcg gcgccagcct gcgcgccgcg gtggacaatc
     8401 cgcggatcgc gcgaggcctc ggcatcgacg tcgatcgcgt gttcgtcatc acgtttgcac
     8461 tgggcaccgc cctggccgcc ctaggcggtg cgctcggcat cgaaatgctc ggtctggacc
     8521 ccgaatttcc catcacctac atcgtctact tcctgatcgt cgtcgcggtc ggaggcagcg
     8581 gcaatatcaa aggctccctc atcgcgtccc tgatccttgg catctgcgac gtcgagggca
     8641 aatactacgt cccgcagatc ggcgccttcg tcatctacct ggtgatggtg gtcacgctga
     8701 ttttccgccc tcaaggcctc ttcggccgct cggcaacgaa atgaccaaag ccgccttcga
     8761 cgccggcaaa ttgcgcgatg cctcgcgatg gcatccggcc gaatatgcgt tctggatact
     8821 gccgattgcc gcctatttcg tattccccga caacctggcc ctgctggcac agatcgccat
     8881 cgccgcgctg ttcgccattt cccttgatct catcctcggc tacgccggaa tcgtttcgct
     8941 cgggcacgcc gctttcttcg gcatcggcgc ctatgccgcc ggcttgctcg cccaagccgg
     9001 ttggggagat cccatcctgg gccttacctg cgccacgttg gcggccgccg ccaccggctt
     9061 cgtcaccagt ttcctggtgc tgcgtggcgc cgacctgaca cgcctgatgg tcaccctggg
     9121 ggtggcatcg atgctgtacg tttcggctaa caaactgaca gacatcaccg gcggtctcga
     9181 tggactgcaa ggcgtcgaga tgaaacccat cttcggatgg ttcgccttcg acctgtacgg
     9241 caaaaccgca tacatttact gcaccgttgc gctgttcgcc atgttctgga tcgcccggcg
     9301 catcgtaaat tcaccgttcg gcctgtcgct gcaaggcatc cgccagaatg ccgcccgcat
     9361 gccggcactc ggcacccccg tcaatgcccg cctggtcgcc gtctacacgc tcggcgctgc
     9421 ctatgccggc gttgccggcg cgctgctgac ccaaaccact caattcgttt caatcgacgt
     9481 gttcagcttc tctcgctcgg ccgaggtgct gttgatcctc gtcttgggtg gcatcggcag
     9541 tctgtatggc ggcatcctgg gtgccgtggt gttcatgacc gtgcatgaat atctgtccgg
     9601 catcgatccg ctgtactggc aattctggct gggcatgctg ctgattgtcg tcgtgctgtt
     9661 tgcccgaggc ggcatcctgg gcgcccttcg tgccgcctcc agaaccctgc ctgggttccg
     9721 gacatgaacc acgccctgca gacccgcagc ctgtccaagc gctttggcgg gttcctcgcc
     9781 accaacaatg ttacactcga catcgccgaa ggcgcacgcc atgccctgat cggacccaac
     9841 ggcgcgggca agacgacact gatcaacctg ctgaccggcg tccttgaacc cacttccggt
     9901 tcagtaatcc tcaagggtca ggacgtcacc cgccaagcgc aacaccgccg cgtcaagcgc
     9961 ggcctggccc gcaccttcca gatcaaccgc ctgttcgccg atatgaccgc gttgcagtcc
    10021 gtcaccctcg cggtgaatga gcggcgcggc atcgccgcac actggtggcg cccaataagc
    10081 gcgcatggtg aagcgatcga cgacgccgca tcattactaa ctcaactcgg cctgctcgac
    10141 gtcgcacatg tgcgaaccaa ggacctgccc tacggcaagc agcgcctgat cgagatcgcc
    10201 ctggccctcg ccgcacgacc cgccgtgctg ctgctggacg aaccggcagc cggcgtcccc
    10261 acaggagaaa gccgcgcact gttcgaaacc atcgcccaac tgccacgcac ggtgaccgtc
    10321 ctgctgatcg agcatgacat ggacctggtg ttccgcttcg ccgaccggat ttccgtcctg
    10381 gtcgcaggcg cgctgctgac cgaggacgtg ccggacgtga ttgccgccga cccacgggtg
    10441 cgagaagtct acctcgggac tgccggccgt ggctgagctt cttcgggttg acggcctctg
    10501 ggccggctac ggcaacgcaa cggtgctgga agacatcacc ttcagcctcg aacccggcgc
    10561 cagtctcgcc ttgctgggtc gcaacggcat gggcaagacc acgctgctcg ccaccctgat
    10621 gggggcgacc aggcagttgc gcggccatat ccggttcgac aatcagaacc tgggcacaca
    10681 gcccagccat cgccgcgcgc acgccggcct gggctgggtg ccgcaggagc gtgatatctt
    10741 cccgtcgctc agcgtcgagg agaatctgac cgtcgtcgcc cgccccggcc cttggggtct
    10801 gcaaaaagtc tatgcgacct ttccccggct tcgggaacgc cgcaccaata tgggcaatca
    10861 gctttccggt ggcgaacagc agatgctggc tctcgcccgg gcactgatgc tgaacccgcg
    10921 gctactcctg ctcgatgagc cattggaggg attggccccg ttgatcgtcc aggaactgct
    10981 gagcagcatc gctcaaatga cgcgcgatgg cgatatggcg gtcatcctgg ttgaacagca
    11041 tgcccagcag atcctgccga ttacccgcga cgcgcttgtg ctcgaacgcg gacgcgtcgt
    11101 gcattacggc ccgagcgacg aactggccgc cgatccggct gtgctggacc gctggctggg
    11161 tgtcgccgcg cactgagccg gctcggccgg ccccgggtct gaggctgctt cggcgcgcgt
    11221 tcgcatgacc gaggc
//
LOCUS       DATAVD010001483         5841 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2188773, whole genome shotgun sequence.
ACCESSION   DATAVD010001483 DATAVD010000000
VERSION     DATAVD010001483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5841
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2188773"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            87..1283
                     /locus_tag="VHX39_28470"
     CDS             87..1283
                     /locus_tag="VHX39_28470"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3995128.1"
                     /translation="MTKTRGVTRRTILTGTAGLLAAPAIIGRAYAATRGVTDNQITFG
                     TMQDLSGVTAVQGVNNADAMRMVYDAVNAKGGIHGRKLNWVLEDMQYIVPKAVQAMNK
                     MLNLDDVFFCIGNGGTPHNDAVMPAMFEKNVPNIFPLTCARSMYEPFNRLKFGQFSSY
                     YDQMRAGVKYFAEKHGKKRVGIMYEDTDFGKDNLAGAVDQIKAMGLQAGATAGFRPTD
                     TDFNAHVARLQDDKCDLVMMGTIVKDTVLILETARKTSFNASFCGNFASYSTAVAEVP
                     GEPAEGFYSMAPALYRYPDNPDPKIHAFCAEFKARWGIEVNYLGEAGHVAATFIVDLL
                     ERIGKDLTLDTLIAGLESTKDWHDIFGGPALNMSPTNHHASSSSFLSVVKKTRWTPVE
                     PGPLTY"
     gene            1515..1742
                     /locus_tag="VHX39_28475"
     CDS             1515..1742
                     /locus_tag="VHX39_28475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995129.1"
                     /translation="MIRSIGLDIMIEHGNAGMIHARSLQMRSLMLMGRSEDELWRDMD
                     PVLRDLFDMQGDKVVTMTIDRPRRRVSVDVE"
     gene            complement(1909..2145)
                     /locus_tag="VHX39_28480"
     CDS             complement(1909..2145)
                     /locus_tag="VHX39_28480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995130.1"
                     /translation="MDANDPELTIAKSLTDKEIGVLLHHNAVHARTDIMCAIMIEAAN
                     RLGGGTETQYVDRPPPLKPPLQAFVTQSSENCCS"
     gene            complement(2260..2466)
                     /locus_tag="VHX39_28485"
     CDS             complement(2260..2466)
                     /locus_tag="VHX39_28485"
                     /inference="COORDINATES: protein motif:HMM:NF020909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1993 family protein"
                     /protein_id="HEX3995131.1"
                     /translation="MAPEHDGVARAAADSFTRGKQIGGEDCLLQVIVPNVYFHLSMAY
                     AILRHNGVELGKMDFLGPMNFVDA"
     gene            2636..3259
                     /locus_tag="VHX39_28490"
     CDS             2636..3259
                     /locus_tag="VHX39_28490"
                     /inference="COORDINATES: protein motif:HMM:NF018712.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1326 domain-containing protein"
                     /protein_id="HEX3995132.1"
                     /translation="MSGTSWRLSGEYMESCNCDYLCPCIYTNPQAEVTYDHCTAALIF
                     RIDQGQAGPVNLDGLCFALVIRSGKVMADGNWVFACVVDEQADDAQRTALSAIVSGEA
                     GGTPGMIRSNLVSDFRGVEFKPIEFRVEGLKRGVTIPQILSFEIEGVASRNRSGEPFF
                     IDNTAHPANRRLALARASALHMKGFGLGLDMVGKGNNGHFAPFNWTA"
     gene            3268..4068
                     /locus_tag="VHX39_28495"
     CDS             3268..4068
                     /locus_tag="VHX39_28495"
                     /inference="COORDINATES: protein motif:HMM:NF021465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2182 domain-containing protein"
                     /protein_id="HEX3995133.1"
                     /translation="MASGDFTSASGALSRRGRFVTLLALGGVTVVAWLWLVMQARYMT
                     DMAGDMTDMVMPLTDAWTASYVFLTFAMWWVMMVGMMLPSAAPMILTFGTLNRNKRAR
                     GQPFVPITIFLLGYLIAWGGFSAIATLAQWALDRFVLLTPMLAIGSSLFGGGLLILAG
                     VYQFTPLKQACLRGCRSPFAFLLNHWRDGWVGALRMGLAHGAYCIGCCAVLMALLFLA
                     GAMNLLWVAMLAVFVFAEKLLPGGEWIGRTGGVAMLGCGAVLLARGFG"
     gene            complement(4245..>5841)
                     /locus_tag="VHX39_28500"
     CDS             complement(4245..>5841)
                     /locus_tag="VHX39_28500"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX3995134.1"
                     /translation="STRNEAGASAGGAMSSPWLIAILVALASFMEVLDTTIANVSLNY
                     IAGGLGVSEDEASWVVTTYLVANAIVLTASPFLARMLGRKNFFLICLGIFTTCSIMSG
                     FAWSLQSLLFFRILQGFGGGGMVPVAQSILADAFPAEKRGQGFAVFGVAVVVAPAVGP
                     TLGGWLSDNISWRWDFLINGPIGVFAIVAIAMVLRESQTVIAEQRRQREQGGGFDLIG
                     FVLVATFLGALEVVMDRGLDDDWFGSSFIIAGSVICALAFMLMIPWEISRRNPMIDLR
                     MVAARQFGACFLVMLATGAILQGTTQFMPLLAQDDFGYTATWAGIMLTPGGLVTLVMM
                     FVVGFMSGKVQPKYLIAAGASIIAFSMYRLTSVYSDLGFWYLAWTRVLTGIGLPLVFI
                     PIMTASFDGIPAGTTDQASALINAARNIGGSIGVSIVSNVLAHREQFHQSRLVENVVP
                     SSAQYQNTLHQVINYFVAQGSSLAHAQQQAIAWIGQQVQAQASLLGFMDAFWVLMLIS
                     LSAVPLALSLRKVKLGGHAPMAH"
BASE COUNT         1207 a         1731 c         1782 g         1121 t
ORIGIN      
        1 aaatcactgt gcaggcgcgc cggcgctcga aagtcaacaa tatacccaac gatcggataa
       61 tccggcggcg ggagggaggc aattctatga cgaaaactcg gggcgtaacc cgccgcacaa
      121 tcttgaccgg aaccgccggg ctgctcgcgg cacctgccat catcgggcgt gcctacgccg
      181 cgactcgcgg tgtgacagac aaccaaatca ccttcggcac catgcaggat ctgtccggtg
      241 tcaccgccgt gcagggcgtc aacaacgctg acgccatgcg catggtctac gacgcggtca
      301 acgccaaggg cggcatccat ggccgcaagc tcaactgggt gctggaggac atgcagtaca
      361 tcgtccccaa agcagtccag gcgatgaaca agatgctcaa cctcgacgat gtcttcttct
      421 gtatcggcaa tggtggcacg ccgcacaacg acgcagtgat gccggccatg ttcgaaaaga
      481 acgttccgaa catctttccg cttacgtgtg cccggtccat gtacgaaccg ttcaaccgtc
      541 tgaaattcgg gcaattctcc tcgtactatg accaaatgcg tgccggggtg aaatacttcg
      601 ctgagaagca cggcaagaag cgggtcggca tcatgtatga ggacaccgat ttcggtaagg
      661 acaacctggc cggcgcggtg gatcagatca aggcgatggg gctgcaggcc ggtgccacgg
      721 cgggcttccg cccgaccgat accgatttca acgcccatgt cgcgcgtttg caggacgaca
      781 agtgcgacct tgtcatgatg ggcaccattg tgaaggacac cgtgctgatc ctggagaccg
      841 cccgcaagac cagcttcaat gcctcgttct gcggcaattt tgcatcctac tccacggcag
      901 tggcggaagt acccggcgaa ccggcggagg gcttttactc catggcgccg gcgctctatc
      961 gctaccccga caatccggat ccgaagatcc atgcgttttg cgcggaattc aaagcgcgct
     1021 gggggatcga ggtgaactat ctcggcgagg ccggccatgt cgcggcaacc ttcatcgtcg
     1081 atttgctgga gcggatcggt aaggacctca cgctcgacac gctaatcgcc ggcctggaaa
     1141 gcacgaagga ctggcatgac atcttcggcg gccctgcgct taacatgagc ccgaccaatc
     1201 atcacgcctc cagcagctcg tttttgtccg ttgtgaagaa gacaaggtgg actccggtcg
     1261 aacctgggcc gctcacttac tgagggaatt cgatgccggt gggtcaggcg gtcattcgcc
     1321 atcgacccac cgcatgactc gctgacgggc cgcacgattg ccacttctgc ggcctgccgc
     1381 tggatcgaga ccacaacgca gcgctgaacg tgctacacgg ggcggcagtg cgtgctgatc
     1441 tcgccactct gccttgcgtg gcggcttgag atcgaagtat cagccagact gcgactaccc
     1501 gaaaggacgt ttcaatgata cgtagtatcg gcctggatat catgatcgag catggcaacg
     1561 ctggcatgat tcacgcgcgt agtttgcaga tgcgcagcct tatgcttatg ggcagatcgg
     1621 aggatgagct atggcgggac atggatcctg tcctgcggga tctttttgat atgcagggtg
     1681 ataaggttgt gacgatgacg atagatcggc cgaggcgacg cgtgagcgtc gacgtggaat
     1741 gacgacgagt gagcagtacc gcgctcgaat cagagtcctc cgcctgacac cgatcggccg
     1801 ggccagcgcc gggaaatatc agtttcatcg ggctatcgct ggccgagtct accctatccg
     1861 cgacccggat gacctgacgg aggccgagcg cgaggagatg attaagtact acgagcaaca
     1921 attctcgctg gactgagtca cgaaagcctg gagcggcggt ttaagtggcg gtggccggtc
     1981 aacatattgc gtctcggtgc ctcctcccaa acgatttgcc gcctctatca tgatggcgca
     2041 cataatgtct gttctggcat ggacggcgtt gtggtggagc aaaactccta tctctttgtc
     2101 ggtcaacgat ttcgcgatcg tcagctcggg gtcgttcgca tccatggctg ttctccctgc
     2161 tgcggaggga gattgaaccg gttggacaga ggctggtcaa tatcagaaaa tttcattccg
     2221 ccagcgaaca acgggagtga ccgacagcgt tcggaccttt caggcgtcga cgaaattcat
     2281 agggccaaga aagtccatct tgcctaattc gacaccgttg tggcggagaa tcgcataggc
     2341 cattgagaga tggaaataaa cgttgggaac gatgacctgc agcaagcaat cctctccacc
     2401 gatttgcttg ccccgcgtga aggaatccgc tgccgccctc gcgacgccgt cgtgctcggg
     2461 cgccaggaga acgaatagac gtccgctcta caggttcgtc gccggataac cgtcgggcgg
     2521 aaaaccaccc gcccctgccg ctggccacat tgcggtcccg cggggatgac ggcacagtcg
     2581 acctcaggat gtacggctgg atcacacatc ctcgcaacag ggaggggtaa caatcatgtc
     2641 cggcacgagc tggcggctca gcggcgaata tatggaaagc tgcaactgcg attatttgtg
     2701 tccctgcatc tacaccaatc cgcaggcgga ggtgacctac gaccattgta ccgccgccct
     2761 gatcttccgc atcgatcaag ggcaggccgg tccggtcaat ctcgacggct tgtgcttcgc
     2821 actggtgatt cgctcaggca aggtaatggc cgacggtaac tgggtctttg cctgcgtcgt
     2881 cgacgaacag gccgatgacg cacagcgcac agccttatca gccatcgtca gcggcgaagc
     2941 cggtggcaca cctggcatga tccgcagcaa cctggtcagc gattttcgcg gtgtcgaatt
     3001 caagcccatt gagttccgcg tggagggtct gaagcggggc gtgaccatcc cccagatact
     3061 gtcgttcgaa attgaaggcg tggcttcccg caaccgcagc ggtgagccgt tcttcattga
     3121 caatacggcg catcctgcga accggcgcct cgcacttgct cgtgccagcg cactgcacat
     3181 gaaagggttc ggtttgggcc tggacatggt gggcaaaggc aacaacggtc acttcgcccc
     3241 ctttaactgg accgcctgac ccccgctatg gccagcggtg attttacgtc tgcctctggt
     3301 gccctgagtc ggcgcggccg attcgttaca cttctggcat tgggcggcgt gacggtggtg
     3361 gcctggcttt ggctggtgat gcaggcccgg tacatgaccg acatggcggg agacatgacc
     3421 gacatggtca tgcctctgac cgatgcgtgg accgcttcct acgtttttct gaccttcgca
     3481 atgtggtggg tcatgatggt gggcatgatg ctgcccagtg ccgcgccgat gatcctgacc
     3541 ttcgggacat tgaaccgcaa caagcgcgca agaggccagc cgttcgttcc gataacgatc
     3601 tttctgctcg gctatttgat tgcgtggggc ggattttccg cgatcgccac tttggcacag
     3661 tgggcgctgg atcggttcgt gcttctgacg ccgatgttgg cgataggaag ttcgttgttt
     3721 ggcggcggcc tattgatcct ggcaggtgtc tatcagttca cgcccctgaa acaggcttgt
     3781 ttgcgaggct gcaggtcgcc attcgcgttt ctcctgaacc attggcggga cgggtgggtt
     3841 ggcgcgctgc gcatgggcct ggcgcatggc gcttattgca tcggctgctg tgcagtactg
     3901 atggcactgc tgtttttggc gggagcaatg aacctgctgt gggtggcgat gctcgctgtg
     3961 ttcgtgtttg ccgagaaact gctgccgggt ggagagtgga ttggacgcac cggtggggtc
     4021 gcaatgctgg gctgcggagc ggtcttgctg gcacggggat ttggctgaaa gccctggccc
     4081 ttcaaaacgt cggcgtcctg cctggccgcg aggcgaggtg cgcggaacgc gaacgttgcg
     4141 agggtcgaac aaggagtgaa acaaagatat tcggcggcaa agacgtgcct cgatacagag
     4201 atctgccgtc cgttttggta ccagaatatg gccgacggcg atcatcaatg cgccatcggt
     4261 gcatgcccgc ccaacttcac cttgcgcaag ctgagcgcca gcggaaccgc cgaaagcgag
     4321 atcagcatca gcacccagaa cgcgtccatg aaacccagaa gcgaagcctg tgcctgcacc
     4381 tgctggccga tccaggcaat cgcctgctgc tgcgcgtgag ccagtgaact gccctgcgcg
     4441 acgaagtaat tgatcacctg atgcagcgtg ttttggtact gcgcgctcga cgggaccacg
     4501 ttctcgacga gccggctttg atgaaactgc tcgcgatgcg ccagcacgtt ggacacgatg
     4561 gacacaccga tcgaaccgcc gatattgcgc gccgcgttga tcagcgccga ggcctgatcg
     4621 gtcgtgccgg cagggatccc gtcgaacgat gcggtcatga tcggaatgaa aaccagcggc
     4681 agtccgatcc cggttagcac acgggtccac gccaggtacc agaatccaag atcgctgtac
     4741 acgctggtca gacggtacat cgaaaaagca atgatcgacg cgccggcggc gatcagatac
     4801 ttcggctgca ccttaccgga catgaacccg accacgaaca tcatgacgag tgtcacgaga
     4861 ccgcccggcg tcagcatgat gccggcccag gtcgcggtgt agccgaagtc atcctgcgcc
     4921 aggaggggca tgaactgagt ggtgccttgc aggatggcac cggtcgccag catcaccaga
     4981 aaacacgcgc cgaattgccg cgccgccacc atgcgcagat cgatcatcgg attgcgccgg
     5041 ctgatctccc acgggatcat cagcatgaac gccagcgcgc aaatcaccga gcccgcgatg
     5101 atgaaggaag aaccgaacca atcgtcatcg agcccgcgat ccatcacgac ctcgagcgcg
     5161 ccaaggaacg tcgcaaccag cacgaagccg atcagatcga agccgccgcc ttgttcgcgc
     5221 tgtcgtcgct gttctgcgat caccgtttgt gactcgcgca gcaccatcgc gatggccacg
     5281 atcgcgaaca cgccaatcgg gccgttgatg agaaagtccc agcgccagga gatgttgtcg
     5341 gacagccacc cgccgagtgt cggcccgacc gcgggcgcca ccacgacggc cacgccgaac
     5401 accgcgaaac cctgtccgcg cttttccgcc gggaaggcat cggccaggat cgactgcgcc
     5461 accggcacca tgccaccgcc accgaagcct tgcaggatgc ggaagaacag cagcgactgc
     5521 aggctccacg cgaacccgct catgatcgag catgtggtga atatcccgag gcagatcagg
     5581 aagaagtttt tgcggccgag catgcgcgcg agaaacgggc tcgccgtcag aacgatggcg
     5641 ttggcaacca ggtaggtcgt caccacccag gatgcctcgt cctcgctgac gcccagaccg
     5701 ccggcgatgt agttaagcga gacattggcg atggtggtgt cgagcacttc catgaagctc
     5761 gccaacgcga ccaggatggc gatcagccac ggactggaca tcgcgccgcc ggcggaggcg
     5821 cctgcctcgt tccgggtact c
//
LOCUS       DATAVD010001484         2427 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1441302, whole genome shotgun sequence.
ACCESSION   DATAVD010001484 DATAVD010000000
VERSION     DATAVD010001484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2427
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1441302"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1136)
                     /gene="icmH"
                     /locus_tag="VHX39_28505"
     CDS             complement(<1..1136)
                     /gene="icmH"
                     /locus_tag="VHX39_28505"
                     /inference="COORDINATES: protein motif:HMM:NF038228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IVB secretion system protein IcmH/DotU"
                     /protein_id="HEX3995135.1"
                     /translation="MSDDPFAEPDDSDKTIIRPAPGGRRAAPAAPAASPFGGAAPQAP
                     PPQRQSAFANTAAAPVSGGAETIQFGLNPLIMAAAPLLQLLGRLRTTMSAPNVDDLRE
                     RTVRQMRQFESAARDGGVPNEQLRPAHYALCASIDDVVLNTPWGSQGGWAARSLVSSF
                     HQEVRSGERFFRILEDLKVTPATYLPVLELMYYCLSLGFLGQYQLPPHRPGEVDRIRE
                     DLYTLIVRQRAATDPALSPHWQGVNSPYKPARAIVPIWVMAAGALAIIGGLFIWFSSG
                     LNAASDETFTAMLNAPLTHMPAITRTVAVRPPEVVVPPPPEPLYVFLKPEIDQGLVTV
                     LGDHAMPIVRIRNKGMFPSGSATINPGYYSLLERIGNALKAEKGP"
     gene            complement(1133..>2427)
                     /gene="tssK"
                     /locus_tag="VHX39_28510"
     CDS             complement(1133..>2427)
                     /gene="tssK"
                     /locus_tag="VHX39_28510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="type VI secretion system baseplate subunit TssK"
                     /protein_id="HEX3995136.1"
                     /translation="EGMFLRTQHFQQQDRWTESLVRGVTRALRPHPWGLIDYTVDRDL
                     LGTGRFALSSASGMFEDGTPFLLPGEADHPAPLDVPDSARNVLVYLALPIRQAGGVEV
                     SDDSSEGRYGARQFEAYDTQSASPIPAELQVGRPRLRYMLEAEERAGYQCIGLARITE
                     ITADRRVILDDRWIPPALVCSATQPLAGLLQELAGMLNQRGEALAARMTAPGQAGVAQ
                     VADFLLLQSINGWQMVVSHWAHAAAIHPETLYTALVKMAGEFATFLETRRPNTYPAYR
                     HDDLQRSFAPVVADLRRSLSAVLEQTAIPIPLREARHGVRVGPITDRSILRASNFVLT
                     VQCDMPAETLRRLFPTQVKIGAVENIRELVNVALPGISVRPLPVAPRQLPFYAGATYF
                     ELDRGSQHWAQMQNSGGFAIHLAGEFPNIRLELWAIRG"
BASE COUNT          467 a          743 c          785 g          432 t
ORIGIN      
        1 ggacccttct ccgccttcaa tgcattgccg atacgttcca gcaaactgta gtatcccgga
       61 ttgatcgtgg cactgccgga cgggaacatc cctttgttac gaatgcgcac gatcggcatt
      121 gcgtgatcgc ccagtacggt aacgagtccc tgatcgattt ccggcttgag gaacacataa
      181 agcggttcgg gcggcggtgg taccacgacc tcgggcggcc gcaccgccac ggtgcgggtg
      241 atcgccggca tgtgcgtcaa tggggcattg agcatcgccg tgaacgtttc gtccgacgcc
      301 gcattcaggc cggacgaaaa ccagatgaac agcccgccga tgatcgccag agcgccagcc
      361 gccatgaccc agatcggcac aatcgcccga gccggtttgt aaggggaatt cacgccctgc
      421 cagtgtggcg acagggcagg atcggtggca gcccgttgcc gtacgatcag cgtgtaaaga
      481 tcctcgcgga tacgatcgac ctcgccgggc cgatgtggcg gcagctggta ctgaccgaga
      541 aatccgaggc ttaagcagta gtacatcagt tccagcaccg gcagatacgt cgccggggta
      601 actttcagat cttccagaat gcggaagaat cgttcaccgg agcggacttc ctgatggaaa
      661 ctcgagacca gggaccgcgc ggcccagcct ccctgactgc cccacggcgt gttcagcacg
      721 acgtcgtcga tactggcgca tagtgcgtag tgcgcaggac gcagttgttc gttcggcacg
      781 ccgccatcgc gggctgccga ctcgaactgg cgcatttgcc gcactgtccg ttcccgtaaa
      841 tcgtcgacgt tgggggcgga cattgtcgtg cgcagacggc caagcaattg cagcaatggc
      901 gcggccgcca tgatcagcgg attgaggccg aactggatcg tttcggcgcc accggagacc
      961 ggagccgccg ccgtgttggc aaatgccgac tgccgttgcg gcggtggtgc ctgtggtgcc
     1021 gctccaccga atggactggc agcgggtgcg gcaggcgccg cgcggcgtcc tcccggagca
     1081 ggccggatga tggttttgtc ggagtcgtcc ggttcggcaa aaggatcgtc gctcatccgc
     1141 ggatcgccca tagttcaagc cgaatgttgg ggaattcacc agcaaggtga atggcgaagc
     1201 cacccgagtt ctgcatttgc gcccagtgtt ggctgcctcg gtcgagttcg aagtaggtgg
     1261 cgccggcgta gaacggcaat tgccttggcg cgaccggcaa cggccggact gaaatgcctg
     1321 gcagcgccac gttgaccagc tcgcggatgt tctccaccgc gccgatcttg acctgagttg
     1381 gaaacagtct tcgaagggtt tccgccggca tgtcgcattg cacggtcaaa acgaaattcg
     1441 atgcacgcag gatcgagcgg tcggtgatcg gtcccacccg cacaccgtgt cgggcttcgc
     1501 gcagcgggat cgggatggcg gtctgttcca gcaccgcgga cagcgagcgg cgcagatcgg
     1561 ccaccaccgg tgcaaagctg cgttgcagat cgtcgtgccg atacgcgggg taggtattgg
     1621 ggcggcgggt ttccagaaat gtcgcgaatt cgccggccat tttcaccagc gcggtataca
     1681 acgtttcggg atgaattgcg gcggcatgcg cccaatgcga aaccaccatc tgccagccgt
     1741 tgatcgactg caacaacaag aaatccgcca cctgggcgac gcccgcctgc ccgggagcgg
     1801 tcatgcgagc cgccagcgcc tcaccgcgtt ggttcagcat cccggcgagt tcctgcaaca
     1861 acccggccag cggttgcgtt gccgaacaga ccagtgccgg cgggatccat cggtcatcca
     1921 aaatcacccg gcggtcagcg gtaatttcgg tgatccgcgc gaggccgatg cactgataac
     1981 cggcgcgttc ctcggcttcg agcatgtaac gaaggcgagg gcggccaacc tgcaattccg
     2041 ccggaatagg ggaggcggac tgggtgtcgt aagcctcgaa ctgacgtgcg ccataacgcc
     2101 cttccgaact atcgtcggac acctcgaccc cgcccgcctg gcggatcggc agtgccagat
     2161 aaaccagcac gttgcgtgcg ctgtccggga catccagcgg tgccggatgg tcggcttccc
     2221 cgggtagcag gaacggcgtg ccgtcctcga acatgccgga tgccgatgac aaggcgaaac
     2281 ggcctgtacc gagcagatcg cggtccaccg tgtagtcgat cagaccccag ggatgcggac
     2341 gcaacgcgcg ggtgacgccg cggacaagcg attcggtcca gcgatcctgc tgttggaagt
     2401 gctgggtgcg aaggaacatg ccttctc
//
LOCUS       DATAVD010001485        10602 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3491114, whole genome shotgun sequence.
ACCESSION   DATAVD010001485 DATAVD010000000
VERSION     DATAVD010001485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10602
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3491114"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..227)
                     /locus_tag="VHX39_28515"
     CDS             complement(<1..227)
                     /locus_tag="VHX39_28515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995137.1"
                     /translation="MTDQGTAYELPPPSHDAELTEVRRGTPMGELLRRYWHPIGLAAD
                     AADTPRPIRVLGEDLILFRDGTRRPGLVHAR"
     gene            319..1488
                     /locus_tag="VHX39_28520"
     CDS             319..1488
                     /locus_tag="VHX39_28520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase domain-containing protein"
                     /protein_id="HEX3995138.1"
                     /translation="MSLKGAGYIVGAWEHPTRKATDKSVTLLHAECAKGALDDAGLTK
                     DDVDAYYCAGDAPGLGPMSMIDYMGLKVRHLDSTDVGGSSYQVAVGHALEAIATGRAN
                     VCLITLAGRPRSEGQATGTAPRAGSPAQPEMQFEYPYGPATANMYAMCATRHMYEYGT
                     TSEQLAWIKVAASHHAQHNPHAMLRDVVTVEDVVNSPMVASPLHRYDCCVISDGGGAL
                     IVTKPEIAKSLKRPLVKVIGVGEAPKNQAGGAVDLVYSAARWSGPPAWEMSGIKPSDI
                     KYASIYDSFTITVLMQLEDLGFCEKGQGGKFVSDGNLISGVDKLPFNTDGGGLCSNHP
                     ANRGGITKIIEAVRQLRGEAHPAVQVPNCNLAMAHGTGGSLGTRHVGSTVILERE"
     gene            1494..1898
                     /locus_tag="VHX39_28525"
     CDS             1494..1898
                     /locus_tag="VHX39_28525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HEX3995139.1"
                     /translation="MAIAAQRKIPFVGTVDTNPETKPFFDGCAAGKLVLPQCVATKKF
                     IWYPRAISPFTLGPVEWKEVSGKGKVYTYSIMERANPPYCIAYVELAEGPRMMTNIVD
                     IDLKDVKIGMDVKLKFIQTEGDGPPMPFFAPA"
     gene            complement(1943..2203)
                     /locus_tag="VHX39_28530"
     CDS             complement(1943..2203)
                     /locus_tag="VHX39_28530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995140.1"
                     /translation="MPITKFSSNPQPAPPELPAEGYPYSEPGLRDWFRRTYAREATER
                     ELGALMAAMATRDDKAGPGEPRAEPGGWRVEPAAAPDFPRRT"
     gene            2413..4191
                     /locus_tag="VHX39_28535"
     CDS             2413..4191
                     /locus_tag="VHX39_28535"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX3995141.1"
                     /translation="MDQLTATADPIVVEIVRGALKAVQHEMEALIERTAMSPFIREKK
                     DFHAALFNRAGKLIAGRSLPTASNLIEPVLELYPAQTMRPGDIYWYNDCYASKGAVSH
                     TPDQVFIAPVFADNHVLAFAHSWAHFNDVGGMRPGSLSADCTEIFQEGIIVPPVLVAR
                     DGVMNEDLLRMFYRNCRFPAMVRGDTRASLAAIRLGERRMLELIDRFGGAKLDAAFDA
                     LLERTARSAREKLRALVPNGEYRFTETIDDDGHGSGPIHIRYRFEVTSDRTVLDFTES
                     DDQVAGPLNFLMNESTPKLALTGYFLGATAEGMMNDGALELIDEVKVRPGSIVQPAFP
                     AALGLRGVTMMRNVAGLLGVMNVATGGKVMAAHSAYVIWYIRGRTDDGETWLMSDGVG
                     VGYGARPHADGNDAIYLVAQENYPVEFMDQVFPVQVRSYEINLDTGGPGRWRGGCGMV
                     REVEVLAEEGMVSLRIDSVNFPPWGVSGGQCARPGRCVINPGRPDERVLGPLSDGNIV
                     RRGDIIRVETGGGGGWGHPFDREPQRVLDDVLCHFVSRASAEADYGVVLTPAGNAVDE
                     AATQARRAHRPKAELFHQNGYRATLD"
     gene            4196..6250
                     /locus_tag="VHX39_28540"
     CDS             4196..6250
                     /locus_tag="VHX39_28540"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX3995142.1"
                     /translation="MSDGITIGIDTGGTFTDVTILDRRNGVIRTAKTPTTPHDPSQGF
                     SRAAQDGLAVMQAGPGDVSRVLHGTTVATNLILEGKGPPVAMLVTAGFRAVLEIGRQD
                     IPRSGSLFEWVKPKRPVPPRLIWEIPGRIDHLGNEIEPLDEAAIRAAARDIAAAGITA
                     IAIVFIHCYANPAHESRAAELIAEAYPSALVSLSSDVLPVFREYERAMTTVLNVYVMP
                     AISAYVGQLEQRLTDQGIAAPLLLMKSSGGVTSARTVRRTPVETVLSGPAAGVVGANF
                     IGQSAGFSDVIAIDIGGTSADISLIHHGQPGMTMAGKIAEWPVGRPMLDITTIGAGGG
                     SIARVSAEGALTVGPHSAGAVPGPVCYGKGGTDPTVTDAHLVLGHLPPYLLDGSFHLD
                     IEAARSAISGKVAEPLGMSIAEAARGIISIVDHNMMGAIRVVSVERGHDPRDFVLVPF
                     GGAGPLHGGSLARLMGIGTFLIPPAPGVLSALGLLVSNLRAEFTRTSLQRAGAVDLAR
                     LSAVFAGLNAEAVAWLDQEAVPAAARRVTWHASLRYQHQGFELIVPWDGTAVTEASLA
                     GTIAGFHRLHEQLYTFAQEDTPVEIVTLRVDAEGAFTPPVLQAVQPGGRPEAAITGEI
                     LIESAAGPLRARIYDRSRLGAGDTIAGPAVLTQLDATTLLLPGQSGTVHELGSMIVRE
                     VP"
     gene            6247..8871
                     /gene="pepN"
                     /locus_tag="VHX39_28545"
     CDS             6247..8871
                     /gene="pepN"
                     /locus_tag="VHX39_28545"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020594318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HEX3995143.1"
                     /translation="MTAQPILLSEYRPPAFLVSSVDLAFDLDPQATKVVSRLGLHRNP
                     EAKPGEPLQLNGEALTLVRIARDGVTLPADAYRIDHGILTIDTMPEQCMLEIETRIAP
                     AENTELSGLYVSGGSYFTQCEAEGFRRITYFPDRPDVMSRYTVSITADKSQIPVMLSN
                     GNPGPVQDVGKGRHQITWSDPHPKPCYLFALVAGDLVSVKDEFTTRSGRHVDLGIYIR
                     RGDEDKCAHAMRSLKTSMRWDEDVFGLEYDLDVFNIAAVSDFNMGAMENKGLNVFNTK
                     YVLAKPDTATDGDYQGIESVIAHEYFHNWTGDRVTCRDWFQLSLKEGLTVYRDQEFSA
                     DQESRAVKRIGDVRALRAAQFREDGGPLAHPVQPKSYLAIDNFYTATVYNKGAEVIRM
                     MATIIGRENFRKGMDLYFQRHDNNAVTIEDFVAAMADASGVNLNKFRTWYDQAGTPEV
                     SVDDAYDAAQKRYRLTVRQTTKPTPGQPDKQPVVIPIALGLLDGNGQELETKLAGETK
                     AQPGTRVLLADAAETTFTFEDVASPPVPSLFRGFSAPIKLSGISPERARFLAAHDTDP
                     FVRWESGQQYATRVLLDMIPAWHRGDALTVDPGLLEVVSETLSQSDKDPAFVAEAMYL
                     PGEAFLADQMAIADVDAIHAVRDAARVAIGQTLRDRLRATYDRYTDTGPYSIDGAAIG
                     KRSLRNACLAYLSAGGDPALAKQQFDTAANMTDGLAALGVLAGIDCNERDAALAAFHA
                     KWHDDPLVLDKWFSIQATSQLPDTVARVRALSAHADFDLRNPNRIRALVGAFAGANQV
                     RFHDAKGEGYRFLADIVIQLDPANPQVAARLVGSLGQWRRFDAGRQALMKGELSRILA
                     LAGLSKNTYEVVSKSMGD"
     gene            9060..10091
                     /locus_tag="VHX39_28550"
     CDS             9060..10091
                     /locus_tag="VHX39_28550"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3995144.1"
                     /translation="MAQTPGRFAGSIDQAWLDRHTEPALEPDLPIVDPHHHLWMRDGN
                     VYLLPELLADIASGHNVVATVFEECHSMYRAAGPDEEKSLGETEFVAGVAAMGASGTF
                     GTAKICARIIGRVDLMLGSRARPLLERHMIASGGRFAGIRQSTAWDASDRIHKVVPTP
                     GMLLDATFRAGFAALSALGLVFDAWVYHPQLSEVADLAASFPRTRIVLNHVGSPILGG
                     PYAADRGKVFADWSTGMANLARHPNVTVKLGALPIRLPGVTAVAKDLPPSSEEVAAAW
                     RPWLETSIELFGADRCMFESNFPVQKRWCSYQVVWNAFKRLATHASATEKAALFAGTA
                     ARVYGVPLA"
     gene            10088..>10602
                     /locus_tag="VHX39_28555"
     CDS             10088..>10602
                     /locus_tag="VHX39_28555"
                     /inference="COORDINATES: protein motif:HMM:NF015057.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TenA family protein"
                     /protein_id="HEX3995145.1"
                     /translation="MTGFSDRIWQRTTPLRDAIHALPFNRELAAGTLARETFQFYIVQ
                     DALYLDQYARALAIAGARGPDSATLRAFGHYAIEAIAVEQALHERYLREFGVDPKSVA
                     LAEPSPDCLGYTSFLMATAYHEPWEVLVAALLPCFWLYWDVGTSIARTAAPDNPYRAW
                     IDTYADDGFGEA"
BASE COUNT         1981 a         3267 c         3291 g         2063 t
ORIGIN      
        1 cagcgcgcat gcacgaggcc cggccgtctg gtgccgtcgc ggaacaaaat caggtcctcg
       61 cccaacacgc ggatcggccg cggcgtgtcg gcggcatcgg cggcgaggcc aatgggatgc
      121 cagtagcgac ggagcaactc acccatcggc gtgccacgcc gtacctcggt cagctctgcg
      181 tcgtgcgacg gtggcggcaa ctcgtacgcg gtgccctgat cggtcatcgc caacctcccg
      241 cctgccaggg tagcggacca gctaccgatg agtatactgg ccgggagcca accggccagg
      301 ccgatgaggg agcgaagcat gagtttgaaa ggtgcgggat atatcgtggg tgcctgggag
      361 catcccacgc gcaaggcgac cgacaaatcg gtcactttgc tgcacgccga atgcgccaaa
      421 ggcgctctgg atgacgcggg cctgaccaag gatgatgtcg acgcctatta ctgcgccggc
      481 gacgcgcctg gtctggggcc gatgtcgatg atcgactaca tgggccttaa ggtccgccac
      541 ctggacagca ccgatgttgg cggctcgtcc taccaggtcg ccgtcggtca tgcattggag
      601 gcgattgcca ccggccgggc caatgtctgc ctgatcactc tggcgggccg tccgcgcagt
      661 gagggccagg cgaccggcac cgcgcctcgg gcgggcagcc cagcgcaacc ggagatgcag
      721 ttcgagtatc cgtacggacc ggcgacggcg aacatgtacg cgatgtgcgc cacacggcac
      781 atgtatgagt atggcacgac cagcgaacag ctcgcctgga tcaaggtcgc cgcctcgcat
      841 catgcgcaac acaacccgca tgcgatgctg cgcgatgtcg ttacggttga ggacgtggtc
      901 aattcgccga tggtggcgag cccgctgcac cgctatgact gttgcgtcat cagcgatggc
      961 ggcggcgcgc tgatcgttac caaaccggag atcgccaaaa gcctgaagcg cccgctggta
     1021 aaagtcatcg gcgtcggtga ggcaccgaaa aaccaggccg gtggcgccgt cgatctggtt
     1081 tactcggcag cgcgttggtc ggggccgccg gcatgggaaa tgtccgggat caagccgtcc
     1141 gatattaagt atgcctcgat ttatgacagc ttcaccatca ccgtgctgat gcagttggaa
     1201 gatcttggct tttgcgagaa gggccagggc ggcaagttcg tttccgacgg caatctgatt
     1261 tccggcgtcg acaagttgcc atttaatacc gatggcggcg gcttgtgctc caaccatccg
     1321 gccaaccgcg gcggcatcac caagatcatc gaggcggtgc ggcagttgcg cggtgaggcg
     1381 catccggcag tgcaggtgcc gaactgcaac ctggcaatgg cgcatgggac gggcggctcg
     1441 ctcggcaccc gtcacgtcgg cagcactgtt attctggagc gggagtaatc gccatggcca
     1501 tcgccgcgca aagaaagatc ccgttcgtcg gcaccgtcga taccaatccg gaaacgaaac
     1561 cgttctttga cggttgcgcc gccggtaaac ttgtcttgcc gcaatgcgtg gcaaccaaaa
     1621 agttcatttg gtatccgcgc gccatctcgc cgttcacgct cgggccggtc gagtggaaag
     1681 aggtgtccgg caaaggcaag gtctacactt acagcatcat ggagcgtgcc aatccgccct
     1741 attgcatcgc ttatgtggaa cttgccgaag ggccgaggat gatgaccaac atcgtcgata
     1801 tcgacctcaa ggacgtgaag atcggcatgg acgtgaaact gaagttcatc cagaccgagg
     1861 gcgacggtcc gccaatgccg ttcttcgctc cggcatgatc gattgacggc agcggcgccg
     1921 ggacagggtc ctggcgccgt ttctatgtac gcctcgggaa atccggagcg gcggccggtt
     1981 cgacgcgcca tccgcctggt tctgcccgcg gctctccggg tccagcctta tcgtcacgcg
     2041 tggccatcgc ggccatcagt gcgccgagtt cgcgctcggt cgcttcacgt gcgtaggtgc
     2101 ggcggaacca atcgcgcagg ccgggctccg aataaggata accctccgcc ggaagctcgg
     2161 gcggtgctgg ctgggggttc gagctgaatt ttgtaatcgg cattcggcgc tcctcggttg
     2221 ccgtgtggtg cacggagaat gcgtggcggg taggtcgggt tccgcatcgc gcccgacgcg
     2281 tctggcggca cgcaaccggc ttggcgccac attcttcatg gccgggcttg accccgccgc
     2341 ctgccgcggc acagttcctg ggtatggccg gtaacggtaa cgcccggcca tatcgttttg
     2401 aggggcttcg ccatggacca actgaccgca accgctgacc ccatcgtggt ggaaatcgtg
     2461 cgcggtgcgc tgaaagcggt gcaacacgag atggaggcgc tgatcgaacg caccgccatg
     2521 tcccccttca tccgcgagaa aaaagatttt cacgccgccc tgttcaaccg ggccggaaaa
     2581 ctgatcgcgg gccgcagctt gccgaccgcc agcaacctga tcgaaccggt actggaactt
     2641 tacccggcgc agaccatgcg gcccggcgat atctactggt acaacgattg ttacgcatcg
     2701 aagggtgccg tatcgcacac gcccgaccag gtcttcatcg cccccgtctt cgctgacaat
     2761 cacgtcctcg cctttgccca ctcctgggct catttcaacg acgttggcgg catgcggccg
     2821 ggttcgctgt cagccgattg cacggaaatc tttcaggaag gcatcatcgt gccacccgtg
     2881 ctggtggccc gcgacggcgt catgaacgag gatttgttgc gcatgtttta tcgaaactgt
     2941 cgctttccgg cgatggttcg gggcgacacc cgcgcctccc tggcggcgat ccgattgggc
     3001 gagcggcgga tgctggaact gatcgaccgg ttcggcggcg caaagcttga tgctgcgttc
     3061 gacgcgttgc tggagcgcac cgcccgatcg gcaagggaaa aattgcgtgc gctggtgccg
     3121 aacggcgaat atcgcttcac cgaaacgatc gacgatgacg gtcacggcag cggaccgatc
     3181 cacatccgtt accggttcga agtgacctcg gaccgcacgg tgctggattt caccgagagc
     3241 gacgatcagg tggccggccc gcttaacttc ctgatgaacg aatccacccc gaaactggcg
     3301 ctgaccggat atttcctcgg tgccaccgcc gagggcatga tgaacgacgg cgcgcttgag
     3361 ctgatcgatg aggtgaaggt gcggccaggc tcgatcgtgc aaccggcgtt tcccgcagca
     3421 ctcggtctgc gcggcgtcac catgatgcgc aacgttgccg gcttgctggg ggtgatgaat
     3481 gtcgccactg gcggtaaggt gatggcggcg catagcgctt acgtcatttg gtatattcgc
     3541 ggccgcactg acgatggcga gacctggctg atgtccgatg gtgtcggtgt aggctatggg
     3601 gctcgtcctc acgccgatgg caacgacgcg atctatctcg tcgcgcagga gaattatccg
     3661 gtcgaattca tggatcaggt gttccccgtg caggtccgtt cctatgaaat caatttggat
     3721 actggcgggc cgggacgctg gcgcggcggc tgcggcatgg tgcgcgaggt cgaagtgctg
     3781 gccgaggaag gcatggtttc attgcgcatc gattcagtga attttccgcc atggggcgtc
     3841 tcaggtggtc agtgcgcgcg gcccggtcgt tgcgtgatca atccgggtcg gcctgacgaa
     3901 cgcgtgctcg gcccgctaag cgatggcaat atcgttcgcc gcggcgacat cattcgcgtc
     3961 gagaccggtg gtggcggcgg gtggggccat ccgttcgatc gtgaaccgca acgggttctc
     4021 gatgacgtgc tgtgccattt cgtcagccgc gccagcgccg aagcggatta cggcgttgtg
     4081 ctcacgccag ccggcaacgc agtcgacgaa gctgcaacgc aggcacgccg ggcgcatcgc
     4141 ccaaaagcgg aattattcca ccagaatggc taccgcgcga cgttggattg accgcatgag
     4201 cgacggcatc accattggta tcgacaccgg cggcaccttt actgacgtaa cgattctgga
     4261 tcggcgcaac ggcgtaatcc gcactgcgaa aactcccacg accccgcacg atccgtcgca
     4321 aggattttcc agggccgcgc aggacggtct tgccgtcatg caagccgggc ccggggatgt
     4381 ttcccgtgtg ctgcatggca ccacggttgc caccaatctg atactcgaag gcaaagggcc
     4441 gccggtcgcg atgttggtca cggcaggctt tcgtgctgtg ctggagatcg gccgccagga
     4501 tatcccgcgt tccggcagcc tgttcgaatg ggtcaagccg aaacggccgg tgccgccccg
     4561 cctgatctgg gagatccctg ggcgcatcga ccatcttggc aacgaaatcg agccgctcga
     4621 cgaagccgcg atccgcgccg ctgcgcggga tatcgctgcc gccggaatta ccgcgatcgc
     4681 tatcgtgttc atccattgtt acgccaatcc cgcgcatgaa agccgcgctg ccgaactgat
     4741 tgccgaagca tatccatccg ctttggtatc gttgtcatcc gacgtgctgc cggtgtttcg
     4801 cgaatatgag cgggccatga caacggtgct gaacgtttac gtcatgccgg cgatttccgc
     4861 ttatgttggg caactggagc agcggctgac cgaccagggt atcgccgcgc cgttgttgct
     4921 gatgaaatcc agcggcggtg tcaccagtgc acgcaccgtt cgacgtacgc cggtggagac
     4981 cgtgttgtcg ggtcccgcgg ccggcgtcgt cggcgccaac ttcattggcc agagcgccgg
     5041 attttccgac gtcatcgcaa tcgacatcgg cggcacctcg gccgacatca gcctgatcca
     5101 tcacggccag ccaggcatga cgatggccgg caagattgcc gagtggccgg tcggacggcc
     5161 gatgctcgac atcaccacga tcggtgccgg cggcggttcg atcgcgcgcg tgtcggccga
     5221 gggagcgctg acggtcggcc cgcacagcgc gggtgccgtg ccaggcccgg tttgttacgg
     5281 taaaggcggc accgatccga ccgtcaccga cgcgcacctg gtgcttggcc acttgccgcc
     5341 gtatctgctg gatggatcgt ttcatctgga tattgaagct gcacgaagcg cgatatccgg
     5401 aaaagtcgcc gaaccgcttg gcatgagcat cgcggaagcc gctcgcggca tcatttccat
     5461 tgtcgatcac aacatgatgg gcgcgatccg cgtggtgtcg gtggaacgcg gccacgaccc
     5521 gcgcgatttt gtccttgtgc cattcggcgg cgctgggccg ctgcatggcg gttcgctcgc
     5581 gcgactgatg gggattggca cgttcctgat tccgccggcg cccggcgtgc tttccgcgct
     5641 cggcctgttg gtgtcgaatt tacgcgcgga atttacccgc accagcctgc agcgcgccgg
     5701 tgccgtcgat ttggctcgcc tctccgccgt gtttgccgga ttgaacgctg aggcggttgc
     5761 ctggctggat caggaggcgg ttcccgctgc cgctcgccgg gtcacctggc atgccagcct
     5821 gcgctatcaa catcagggat ttgaactgat tgtgccatgg gatggcaccg cggtgacaga
     5881 agcctcgctt gccggcacga ttgcagggtt tcatcggtta catgaacagc tctatacatt
     5941 tgcgcaggaa gataccccgg ttgagatcgt caccttgcgg gtcgatgccg aaggtgcatt
     6001 cactccaccg gtgctgcagg cagtgcagcc tggtggccgg ccggaggcgg cgatcaccgg
     6061 tgaaatcctg attgaatccg ctgccggccc attgcgtgcg cggatctatg accggtcccg
     6121 ccttggtgcc ggtgacacca tcgccgggcc ggcggtattg acccaactgg atgcgactac
     6181 cctgctgctg cctggccaat ccggaacagt ccacgaactc ggatccatga tcgtgagaga
     6241 ggtaccatga ctgcccaacc catcctgctc agcgaatatc gtccaccggc gtttctggtc
     6301 agctcggtcg atctggcgtt cgatttggat ccgcaggcga ccaaggtcgt atctcgtctg
     6361 ggcttgcatc gaaacccgga ggcgaagccc ggtgaaccct tgcagctgaa tggcgaggcg
     6421 ctgacgttgg tgcgtattgc tcgcgatggg gtgacgctcc cggccgacgc ttaccggatc
     6481 gatcacggca ttctgaccat cgatacgatg cccgagcaat gcatgctgga aattgaaacc
     6541 cgcatcgcgc cggccgagaa caccgaactg tccgggctgt acgtctctgg cggcagttat
     6601 ttcacccagt gcgaggcgga aggcttccgc cgcatcacgt atttccccga ccgtcccgat
     6661 gtaatgtcgc gttataccgt cagcatcacg gccgacaaat cgcaaatccc cgtcatgtta
     6721 tccaacggca atcccggtcc ggtgcaggat gtgggcaagg gccggcatca gatcacctgg
     6781 tccgatccgc atcccaagcc atgctatttg ttcgcactgg tcgccggcga tctcgtttcg
     6841 gtgaaggatg aatttaccac gcgctccggc cgccatgtcg atctcgggat ctatatccgc
     6901 cgcggcgatg aggacaagtg cgcgcacgcg atgcggtcgc tcaaaacctc catgcggtgg
     6961 gatgaagatg tattcggcct ggaatacgat ctcgacgtat tcaacatcgc agcggtgtcc
     7021 gacttcaaca tgggcgcgat ggaaaacaag ggcctgaacg tcttcaacac caagtacgtg
     7081 ctggcgaaac cggataccgc aacggacggc gactatcagg gcatcgagtc ggtcatcgcg
     7141 cacgaatact tccacaattg gaccggcgat cgggtgacct gccgtgactg gttccaactt
     7201 tccctcaaag aaggcctgac agtttaccgc gatcaggaat tctctgccga tcaggaaagt
     7261 cgtgcggtca agcgcatcgg cgacgtgcgc gcattgcggg cggcgcagtt ccgcgaggat
     7321 ggcggaccgc tggcgcatcc ggtgcaaccg aaatcctatc tggcgatcga taacttttac
     7381 actgcgacgg tttacaacaa gggcgccgag gtcattcgca tgatggctac catcatcggt
     7441 cgcgaaaatt tccgcaaggg catggacctg tatttccaac ggcacgacaa caatgcagtg
     7501 acgatcgaag actttgttgc agcgatggcc gatgcgtcgg gtgtcaacct caataaattc
     7561 cgcacctggt acgaccaggc gggtacaccc gaggtcagtg tcgacgatgc ttacgatgca
     7621 gcccagaaac ggtatcggct gacggtccgg cagaccacca aaccgacccc gggccaaccc
     7681 gataaacaac cggtggtcat tcccatcgct ctggggttgc tcgacggcaa cggtcaggaa
     7741 cttgaaacga agcttgcggg tgaaacgaaa gcacagccgg gcacgcgagt gttgctggcg
     7801 gatgcggcgg aaaccacttt tacctttgag gacgtggcca gtcccccggt cccatcgtta
     7861 ttccgcggct tttccgcacc gatcaaactg tcgggcatca gtccggagcg tgcccgtttc
     7921 ctcgccgcac atgacaccga tccgttcgtg cgttgggaat ccgggcaaca atacgcaacg
     7981 cgcgtgctgc ttgacatgat cccggcctgg catcgcggtg acgcgctgac cgtcgatccc
     8041 ggattgcttg aggtcgtgtc ggaaaccctg agccaatccg acaaggatcc ggcatttgtg
     8101 gccgaagcga tgtatttgcc gggtgaggcg ttcctcgccg atcaaatggc aatcgccgac
     8161 gtcgacgcga tccatgcggt acgtgacgct gcgcgggtcg ccatcggcca gaccttgcgc
     8221 gaccggctgc gcgcaaccta cgaccgctat accgacaccg gaccgtacag cattgacggt
     8281 gcggcgatcg gcaagcggtc gttgcgcaat gcctgccttg cttatctctc ggctggcggc
     8341 gatccggctc tggcaaaaca gcagtttgat actgcggcca acatgaccga tgggcttgcg
     8401 gcattgggtg tgctggctgg catcgattgc aatgaacgag acgcagcgct ggccgcgttc
     8461 cacgccaaat ggcatgacga cccgcttgtg ctggacaaat ggttctccat ccaggcgacg
     8521 tcgcaattgc ccgacactgt cgcacgggtg cgggctttgt cggcgcatgc ggacttcgat
     8581 ctgcgcaatc cgaaccggat ccgcgctttg gtcggcgcct tcgccggggc caatcaggtg
     8641 cgctttcacg atgccaaagg tgagggctac cgcttccttg ccgacattgt gatccagctt
     8701 gatccggcca acccgcaggt cgccgcacgc cttgttggtt cgctcggcca atggcgtcgc
     8761 ttcgatgccg gccgccaggc gttgatgaag ggcgaactca gccggatcct tgcattggcc
     8821 gggctgtcga agaacactta cgaagtcgta tcaaaaagta tgggtgactg aaagaatcct
     8881 ccgtgtcctc ccgcttctcc gcgacctcag tggtaaatgt gacgttggag ccgacccaga
     8941 cgtggggggt atttgtcagc gcctgtgcgc gtaaccaggc cggcaatttc accaaggacg
     9001 cggaggaaaa ggagaacgcg gagcattgca gcgcctgaaa caaattaagg aaacctccaa
     9061 tggcgcaaac tcctggccgt tttgctggtt ccatcgatca ggcctggctc gaccgccaca
     9121 ccgaacccgc gctggaaccc gacctgccga tcgtcgatcc gcaccatcac ttatggatgc
     9181 gggatggcaa cgtctatctg ctaccggaat tgctcgccga tatcgccagc ggccataacg
     9241 tcgtggcaac ggtgttcgag gaatgccact cgatgtaccg tgctgcaggc cccgacgagg
     9301 aaaagtcgct cggggagacc gagttcgtcg ccggtgttgc cgcaatgggc gccagcggga
     9361 cattcggcac cgcgaaaatc tgtgcccgta tcattggccg tgtcgatctt atgctcgggt
     9421 cccgtgccag gccattgctc gaacgccaca tgatcgccag cggcggacgg tttgccggca
     9481 tcaggcaatc caccgcctgg gatgccagcg accgcatcca caaagtcgtg ccaaccccgg
     9541 gaatgctgct tgatgccacg ttccgggcgg ggttcgccgc actcagtgcg cttggcctcg
     9601 tattcgatgc ctgggtgtat catccgcaac tttccgaagt tgccgatctc gccgcttcct
     9661 tcccgcgtac caggattgtg ctcaaccatg ttggcagccc gatccttggc ggcccctacg
     9721 cggccgaccg gggcaaagtc tttgccgatt ggagcaccgg catggcaaac ctcgcaagac
     9781 acccaaacgt aaccgtcaaa ctcggcgcct tgccgatccg cttgccgggc gtcaccgcgg
     9841 tcgccaaaga tcttccgccg tcatccgagg aagtcgccgc tgcctggcgc ccttggctgg
     9901 aaaccagcat cgaactgttc ggcgccgatc gctgcatgtt cgaaagcaat tttccggtgc
     9961 agaaacgctg gtgttcctat caggtggtgt ggaacgcgtt caaacgcctc gccacgcatg
    10021 cctcggccac cgagaaagcc gcattgttcg ccggcaccgc ggcgcgcgtt tatggagttc
    10081 cattggcatg accggtttct ccgaccgcat ctggcaacgc accaccccgt tgcgtgacgc
    10141 cattcacgca ctccccttca accgggaact cgccgccggc acgctggcgc gcgaaacgtt
    10201 ccaattttat atcgttcagg acgcgctgta tctcgatcaa tacgcacgcg ccctcgccat
    10261 cgccggcgcg cgtgggcccg atagtgcgac gctccgagcc ttcgggcatt acgccatcga
    10321 ggccatcgcc gtcgaacagg cattacacga acgctactta agagaattcg gcgtcgatcc
    10381 aaaaagcgtt gcattggcgg aaccatcgcc ggattgtctc ggctacacca gtttcctgat
    10441 ggcgaccgcg tatcatgaac cgtgggaggt cctggtcgcc gccctgttgc cgtgtttctg
    10501 gctgtactgg gacgtcggca cttcgatcgc caggaccgct gcgccggaca atccttatcg
    10561 cgcctggatc gatacctatg ccgacgacgg gttcggtgag gc
//
LOCUS       DATAVD010001486         3572 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3680224, whole genome shotgun sequence.
ACCESSION   DATAVD010001486 DATAVD010000000
VERSION     DATAVD010001486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3572
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3680224"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(85..759)
                     /locus_tag="VHX39_28560"
     CDS             complement(85..759)
                     /locus_tag="VHX39_28560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3995146.1"
                     /translation="MIELRAVSQRFQAHTVLYQLDLTLTERRIGVVGGNGSGKSTFAR
                     LLNGLQIPTEGVVKVDGLDTSRHGREVRQRVGFVFQNPDNQIVMPLVDEDLAFGLRCL
                     RLPRAELEVRLDAVLALHGLSACRDQSAHLLSGGQKQMLAIAGVLVMQPRYIVFDEPT
                     TLLDLRNTRRVARTIAELPQTAIVVSHDLELLRDFDRVLVFQDGRLVDDDRPDAALTR
                     YAAAMA"
     gene            925..1629
                     /locus_tag="VHX39_28565"
     CDS             925..1629
                     /locus_tag="VHX39_28565"
                     /inference="COORDINATES: protein motif:HMM:NF024940.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3995147.1"
                     /translation="MSGKSPVTANGDQRAALSALAASRDRGEADRARAVLLTLSGWTS
                     PWIAEAFGVREDTVRLWRGDFARGGVDALKARIAPGPEPVESTVALRVVTPLLEEPVA
                     DRKNWTIARLRAEIEAREGVRISRSQLSKALRKKLPLAAAQAHAERSQIASEVDRIGL
                     RLQLRKRQAEAGDIVLLYGDESEALTHPYLARAWAKSGADLRVPASLSVILCAGHNQR
                     QGGVLCHAEPRDWTAP"
     gene            1593..2849
                     /locus_tag="VHX39_28570"
     CDS             1593..2849
                     /locus_tag="VHX39_28570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011000219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
                     /protein_id="HEX3995148.1"
                     /translation="MPRRAKRLDRTVARLPSIPKELVAQFLTGPMTGEAINAAGIAFR
                     QALIEASLNAELTHHLGYAPGAERPESTTNQRNGVSAKTVLTGDGRVRIETPRDRDGS
                     FEPLLLPKHARRFTAFDDSIVALYARGLTVREIKGYLAESYGTEVSPDLISTVTDSVL
                     AEVTAWQARPLETVYPVVFFDALRIKVREDNVVRNKAVYLALGVRRDGSREILGLWIE
                     TTEGAKFWMKVFNDLKTRGVNDILISVTDGLAGMPAALTAVFPRTTLQTCIVHLIRNS
                     LDYASWKDRKRLAAALRPIYAAASAEAALAALDAFADGEWGRKFPTVVAAWRRAWDQV
                     IPFFTFPPEIRRVIYTTNAIESVNARVRKIIKTRGHFPTDDAANKLIWLALRNITADW
                     GKAAHNWKEAMNQFAILYDDRFNAAG"
     gene            2920..3207
                     /locus_tag="VHX39_28575"
     CDS             2920..3207
                     /locus_tag="VHX39_28575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995149.1"
                     /translation="MSNAERQARFRARRQTPQPPLTVKHPPAPARRSRSKRWNDALAE
                     MFAVQTECAAWFEALPESLRDSATATALQDIIDLDLDAIAAVQPPRGYGRD"
BASE COUNT          710 a         1103 c         1160 g          599 t
ORIGIN      
        1 gccagtcggt aaccaggaac aacgtactgc cggcaattag caacgtcagt agctttagcc
       61 agaccggaag tttgtgcagc aggctcatgc catagccgcg gcatagcgcg tcagcgcggc
      121 gtccggcctg tcgtcgtcga ccagtcgtcc atcctgaaaa accagcaccc ggtcgaaatc
      181 acgcagcaat tcgaggtcgt gtgaaaccac gatcgcagtt tgcggcaact ccgcaatcgt
      241 gcgggcgacc cgccgggtat tgcgcaggtc caacagcgtg gttggttcgt caaacacgat
      301 ataacggggc tgcatcacca ggacgcctgc aattgccagc atttgcttct ggccgccact
      361 gagcaaatgc gccgactgat cgcggcaagc cgagaggccg tgaagagcca gtacagcatc
      421 cagccggacc tccagttccg cgcgcggcag acgcaggcac cggagcccga acgcaaggtc
      481 ttcgtcgacc aacggcatca cgatctggtt atccgggttc tgaaatacga agccgacccg
      541 ctggcgcacc tcgcgaccat ggcggcttgt gtccagtccg tccaccttga cgacgccttc
      601 ggtcgggatc tgcagcccgt tgagcagccg ggcgaatgtg ctctttcctg acccattgcc
      661 gcccaccacg ccgatccgac gttccgttag cgtcaggtca agttggtaca acaccgtgtg
      721 cgcctggaaa cgctgcgaaa cggcgcgcaa ttcgatcatt gcggtctccg gacatcccca
      781 caacgtacaa gagccagaat agcgtgcgtg tgttaaaaga ggttgatctg aatcagcatg
      841 ttaaaaaccc taagcagatt cccgtcggtt gaccaacgga ccgcggtacg attcgcttca
      901 cgcaccgatt cgggcaggtg cggcatgagc gggaaatctc cggtaacagc gaatggcgat
      961 cagcgagccg ccttgtcggc tctggcggcg tcacgcgatc ggggggaggc ggacagagcg
     1021 cgggccgttc tgttgacgct gtcaggctgg accagccctt ggatcgctga agcgttcggc
     1081 gtgcgtgagg acacggttcg cctttggcgc ggcgatttcg cccggggtgg tgtcgatgcg
     1141 ttgaaggcgc gcatcgcccc agggccagag ccggtggaga gcacggtggc gttgcgcgtg
     1201 gtcaccccct tgcttgaaga gcccgtggcc gacagaaaga actggacgat tgcacgactg
     1261 cgcgccgaga tcgaagcgcg cgagggcgtc cgcatcagcc ggtcgcaatt gtcaaaagcg
     1321 ttgcgaaaaa aactcccgtt ggcggcggcc caggcacacg ctgaaaggag ccagatcgcc
     1381 agcgaggtgg accggatcgg tttgcgtctg caacttcgta agcgtcaggc cgaggctggc
     1441 gatatcgttc ttctctacgg cgacgaaagc gaggcgttga cgcatcctta tctcgcgcgt
     1501 gcctgggcaa agtcaggcgc cgacctgcgc gtgccagcga gcctgtccgt aattctgtgt
     1561 gcggggcata accaacgcca aggaggcgta ttatgccacg cagagccaag agattggacc
     1621 gcaccgtagc caggctgccc tcgatcccga aagagcttgt cgcgcagttc ctgaccggcc
     1681 ccatgaccgg agaggcgatc aacgcggcgg ggatcgcgtt caggcaggcg ctgatcgagg
     1741 catccctgaa cgccgaattg acgcaccacc tgggctatgc gccgggcgcg gagcggccgg
     1801 agtccacgac caaccagcgt aacggtgtca gcgccaagac ggtgctgacc ggcgacggcc
     1861 gcgtgcggat cgagacacca cgcgaccggg acggcagttt cgagcctttg ctgttgccga
     1921 aacatgcgcg ccgcttcacc gcgttcgacg acagcatcgt ggccttgtat gcgcgcgggc
     1981 tgacggtgcg cgagataaaa ggctatctgg ctgaaagcta cggtaccgag gtgagccctg
     2041 atctgatcag cacggtaacc gacagcgtgc tggcggaggt cacggcctgg caggcccggc
     2101 cgttggagac agtatatccg gttgttttct tcgatgcatt gcggatcaag gtccgggaag
     2161 acaacgtggt gcgcaacaaa gcggtgtatc tggctctggg cgtccgccgc gatggctcgc
     2221 gcgagattct gggcctgtgg attgagacga ccgagggcgc gaagttctgg atgaaggtgt
     2281 tcaacgatct gaagacccgc ggcgtcaacg acatcctgat ctcggtgacc gacgggctgg
     2341 cgggaatgcc ggcggcactg acggcggttt ttcctcgcac caccttgcaa acctgcattg
     2401 tgcacctgat ccgcaacagt ctggattacg ccagctggaa ggaccgcaag cggctcgccg
     2461 cggcgctacg gccgatctac gcggccgcca gcgccgaagc cgcactcgcg gcgctggatg
     2521 cgttcgcgga tggcgaatgg ggacggaagt ttccgaccgt cgttgccgcg tggcggcggg
     2581 cctgggacca ggtgattccg ttctttactt tcccgccgga gatcaggcgg gtgatctaca
     2641 ccaccaacgc gatcgaaagc gtgaacgcgc gagtgcgcaa aatcatcaag acacgcggcc
     2701 attttccgac cgacgacgcg gcgaacaaac tcatatggct tgcgttacgc aacatcactg
     2761 ccgattgggg caaggccgcg cataactgga aggaggcgat gaaccagttc gcgatcctct
     2821 atgacgaccg cttcaatgcg gccggctgat cccttggagc gtcgttacgt aacggagaaa
     2881 atcatgcccg gtggccatat gccggaaggt tccgccgcgt tgagcaacgc cgaacgccag
     2941 gctcgcttcc gcgcccggcg gcagacaccg caaccaccgc tcaccgtcaa acacccgccg
     3001 gcaccggcgc ggcgaagccg atcgaagcgc tggaacgacg cgctggccga gatgttcgcg
     3061 gtccagaccg agtgcgcggc gtggttcgag gccctgcccg aaagcctgcg cgacagtgca
     3121 acggcgacgg cacttcagga catcatcgat ctcgatctgg acgcgatcgc cgcggttcag
     3181 ccgccgaggg gatacggccg tgactgagcg ttgcgccacg acgtttggcc gaagcgtggc
     3241 gccttgcccg ggccgcggca aatcgtgggt cctcgccatg ctcgccccaa agcgggggct
     3301 acgcgtggct ccggtcccgc cgaggacggc ggatttgact cgccccgcgc gcggccgccg
     3361 ggacaatgcc aggtcgggac gaaggaaccg gcgctttgat cgaaccaagg aacaaccgcg
     3421 cacgttgagg cctgtcaacg caaagttaga atgtcccctg gttctgcaac gcgagaatgt
     3481 cccctcgggc accgaagtgg ggtgggtaac gccggggagc gcgcccacaa caagcgccgt
     3541 agcgagccgg cgttatccac gcccgatcgg ca
//
LOCUS       DATAVD010001487         1711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2373644, whole genome shotgun sequence.
ACCESSION   DATAVD010001487 DATAVD010000000
VERSION     DATAVD010001487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2373644"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..257)
                     /locus_tag="VHX39_28580"
     CDS             complement(3..257)
                     /locus_tag="VHX39_28580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEX3995150.1"
                     /translation="MQHGIVAWLIIGAVAGWLAGKIVEGSGFGLVIDIVVGIVGAFIG
                     GWLAGALGLQFGGGMISSIVVAVIGAIVLLFGLRIIKRAM"
     gene            926..1633
                     /locus_tag="VHX39_28585"
     CDS             926..1633
                     /locus_tag="VHX39_28585"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX3995151.1"
                     /translation="MAHLLRAMVLVALTFLPASVATAQPALHPQDTMEARLRACAACH
                     GEQGQGTNNDYFPRLAGKPAGYLMNQLVAFRDGRRRYPPMNYLLEYLPDAYLQQIADN
                     FAELRPPPLAPAVADLSPAILARGQAIVAQGDSAHGVPACSGCHGPALTGMEPAIPGL
                     VGLHASYISAQLGAFRYGTRTAPAPDCMQLIAASLTEGDVTAVSAWLATRPVPADPSP
                     VAHGSLAMPMDCGSEPH"
BASE COUNT          322 a          550 c          497 g          342 t
ORIGIN      
        1 aactacatcg ctcgcttgat aatgcgcagg ccgaacagca ggacaatggc gccaatgacc
       61 gccactacga tggaactgat cataccgccg ccgaactgaa gacccagagc gcccgccagc
      121 cacccaccta tgaaggcgcc gacgatgccg acgacaatgt cgatcacaag gccgaagccg
      181 gagccctcta caattttgcc cgccaaccat ccggccactg cgccgatgat cagccatgct
      241 acgattccgt gttgcatcgg tttccccctc cgtatttcca gaccggcgaa atcgcagcat
      301 ccggaccccc aaacagcatt cttcccaccg caatcgggca caatcaaggc gttcgaactc
      361 gggagtgggc ttgtcaccct gtgcagcgcc ggtttgctct gccggcgggt ccatcgcggc
      421 tttggccatc ctgtgttttg gaaattatcg ggcggcatcg aaagatcgcg gatcaacggc
      481 atcctagcct ccactgtaag ttacagttgg cctcgcaaac gatatgggtc aggcaggaac
      541 ctggacacct cgtatagccg gaacagcgga gcagaccgtc gatgtcgcac cattgctcag
      601 gttccgactt ttggtttccg cgttcggacg cgtgtcttga cctcaccgac cggtatgctt
      661 tctccaagcc gggaggcatc ggcaagtcga tcctgacagg agatggcgtc gggccgcaca
      721 ccgagttgct cagcgaactc ccttacgtcg ggccaccgca taacctgagg gcgtccgggt
      781 gttgatggtt tgccgtccga tttggccatg cagtcttacg agttgcgagt tacgtttgtt
      841 gcggcacagt gttgccgtgc cttttatcgt ggagacaaga aacctgcggt tcgcgaacag
      901 atatactgag cggggagccg agcgcatggc acacctgctc cgggcgatgg tgctggtcgc
      961 cctgacgttt ttgccggctt ctgttgcaac ggcgcagcct gcgcttcacc cgcaggatac
     1021 catggaggca cgcttgcgcg cctgtgcggc ctgccatggc gagcaaggcc agggcacaaa
     1081 taacgattac ttcccgcgac ttgccggcaa gccggcaggt tacctgatga accaacttgt
     1141 tgcgttccgc gacggccgcc gccgttaccc gccaatgaat tatcttctgg aatatctgcc
     1201 agacgcatat ttgcagcaga tcgcggacaa cttcgcggaa ttgcgtccgc cgccgctggc
     1261 gcctgcagtg gcagatctaa gcccggctat ccttgcgcga ggacaggcga tcgtcgctca
     1321 gggtgactcc gctcatggtg tgcccgcctg ctcgggttgt cacggtcctg ctctcacggg
     1381 catggagccg gccataccgg gcctggtcgg gctgcacgcc agctatatca gtgcgcaact
     1441 gggggcgttc cgctacggca cccgcaccgc gcccgcgcca gactgtatgc aactgatcgc
     1501 cgccagcctg accgagggcg acgtcactgc ggtctccgcc tggctcgcga cccgtccagt
     1561 acccgcggac ccgtcaccgg tggcgcatgg ttcactggca atgccaatgg attgcggcag
     1621 cgaaccgcac tgagggaggc agcgtcgtgc gcatttgcaa catcattttg ctgaccttct
     1681 tcctcgcggg cctggtgcaa atcggcactt c
//
LOCUS       DATAVD010001488         2258 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2373691, whole genome shotgun sequence.
ACCESSION   DATAVD010001488 DATAVD010000000
VERSION     DATAVD010001488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2258
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2373691"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..519)
                     /locus_tag="VHX39_28590"
     CDS             complement(<1..519)
                     /locus_tag="VHX39_28590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3995152.1"
                     /translation="MTDAPAKAVLLTGASGNLGRMLTRALAAEGWTLRLTDIAPFSDP
                     VPAGATFTRADLNDGVTILRLAEGCDAIVHLGGVSVERPFEEVLGPNIRGLYHIYEAA
                     RREHARVIFASSNHSIGFHERTSTLGADTQFLPDGFYGLSKAYGELMGRLYWFKHGVE
                     SVFIRIGSCFPEP"
     gene            553..1890
                     /locus_tag="VHX39_28595"
     CDS             553..1890
                     /locus_tag="VHX39_28595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013641013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX3995153.1"
                     /translation="MRAIEDLAQSLANGQTTSRALVEEALSRIADPAGEGARTFIKVH
                     AEQARTAADAVDAARRVGLPLGRYAGIPIALKDLFDIAREPTPAGSKVLADAPPARQN
                     AAVVQRMLNAGFIAMGRVNMTEFAFSGLGINPHYGTPASPWDRDAARIPGGSSSGTAV
                     AVADGMAAAGLGTDTGGSCRIPAAFCGVVGYKPTARRVPITGVLPLAPSLDSVGPLAP
                     TVACCAAIDAILADRPLAPPLPTPLSGLRLAVPENIVLDGMDRTVATAFEQALSVLSI
                     AGATIRRVRFPAFDAIGPVNAKGGYAASEAYAWHRALLATKGAGYDPRIRVRIMRGEA
                     MSAADYLDLAPARARIIAAFDVSTRDFDCVVMPTVPIIAPRIVDLEDEREYNRVNMLV
                     LRNTALGNFLDRCAISIPCHRPGDAPVGLMLMGETMGDARLFRIATAIEAELR"
     gene            complement(1891..>2258)
                     /locus_tag="VHX39_28600"
     CDS             complement(1891..>2258)
                     /locus_tag="VHX39_28600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014242709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3995154.1"
                     /translation="ATNCARNWPVWLMIIEMEYAVMSKAGSRILQSVRTARAFARGDS
                     DGGFVVHVPDNVDVRSIRADLGLSQEAFANRFGFSLAAVSDWEQQRRTPERAARVLLL
                     VIAQDPSAVDRALAAAQAG"
BASE COUNT          406 a          707 c          759 g          386 t
ORIGIN      
        1 tggctcgggg aaacaggaac cgatgcggat gaacacactt tccacaccgt gcttgaacca
       61 ataaaggcgg cccatcagtt cgccataggc tttggacaaa ccatagaacc cgtcgggcag
      121 aaactgcgtg tcggcaccaa gcgtggaggt tcgctcgtga aagccgatcg agtggttgga
      181 tgaggcaaaa atgacgcgtg cgtgttcgcg gcgtgcggct tcgtaaatgt gatacaggcc
      241 gcgaatgttt gggccgagca cttcctcgaa cggccgctcg accgatacgc caccgagatg
      301 gacgattgcg tcgcagcctt ccgcgaggcg caggatcgtc acgccatcgt ttagatcggc
      361 gcgggtgaaa gtggcgcccg ccggaaccgg gtcggagaac ggagcgatgt cggtcaaccg
      421 cagcgtccag ccctcggcgg cgagtgccct ggtcagcatg cgaccaagat tgccggaggc
      481 gccggtcaac agcacggctt tggcgggcgc gtcggtcatg gcatggtctc cactgcggaa
      541 caggagaaca tcatgcgcgc gatcgaggac ctggcccaga gcctggcgaa cggccaaacc
      601 accagccgcg ctctggtgga agaggcactg tcccggattg ccgatcctgc gggagagggc
      661 gcccgcacct tcatcaaggt gcatgccgag caggccagga cggcagccga tgcggtcgat
      721 gcggcgcgcc gggtcggact gcctctgggc cgttacgcag gcatcccaat cgcgctgaag
      781 gacctgttcg acatcgcgcg cgaaccaacg ccggccgggt cgaaggtgtt ggctgatgcg
      841 ccgccggctc ggcaaaacgc cgccgttgtg caacgcatgc tgaatgccgg gttcattgcg
      901 atgggccggg tcaacatgac cgagttcgcg ttctcgggtc tgggcatcaa cccgcattat
      961 ggcacgccgg cctcgccatg ggatcgtgac gcggcgcgga tccccggagg cagctcatcc
     1021 ggcaccgcgg tcgcggtcgc agacggcatg gcggcagccg gactgggcac cgacaccggc
     1081 ggatcgtgcc ggattccagc agcgttttgc ggtgtcgtcg gttacaagcc caccgcccgc
     1141 cgggtgccga tcaccggcgt gttgccgttg gcgccatcgc tggattcggt cggtccactg
     1201 gcgcccacgg tggcctgttg tgcggcgatc gacgccattc tggcggacag gccgctggcc
     1261 cctccattgc caacaccgtt gtccgggctg cgcctcgcgg tgccggaaaa catcgtgctc
     1321 gatggcatgg accggacggt ggccacggcg ttcgaacagg cgctgtcggt gctgtcgatc
     1381 gccggagcaa cgatccggcg ggtccgcttc ccggccttcg atgcgatcgg tccggtcaac
     1441 gccaaaggcg gctatgcagc gagcgaggca tatgcctggc atcgcgcgtt gctcgcgacc
     1501 aaaggtgctg gctacgatcc gcgtattcgg gtgcgaatca tgcgcggcga ggcgatgagt
     1561 gccgcggatt acctggatct ggcgccggcg cgcgcgcgga tcattgcagc gttcgatgtc
     1621 agcacacgag acttcgattg tgtcgtgatg ccaacggtgc cgatcattgc cccgcgcatc
     1681 gtcgatctgg aggacgagcg cgagtacaac cgggtcaata tgctggttct acgcaacacc
     1741 gcattgggca acttcctgga tcgttgcgcg atcagcattc catgtcatcg tcccggcgat
     1801 gcgccggtcg ggttgatgct gatgggcgaa acgatgggcg atgcacgact gttccgtatc
     1861 gccacggcaa tcgaggccga gttgcgctga tcagcccgcc tgagccgccg ccaaagcgcg
     1921 atcgaccgca gacgggtcct gcgcgatcac cagcaacagc acgcgtgcgg cgcgttccgg
     1981 cgtgcgccgt tgctgttccc agtcgctgac cgcggcgagg ctgaagccaa agcggttggc
     2041 aaaggcctcc tggctcaggc ccagatcggc acggatgctg cggacatcga cgttgtcggg
     2101 cacatgcacg acaaacccgc catccgaatc gccgcgagca aacgcgcggg cggtgcggac
     2161 gctttgaaga atacggctac cagccttgga catgacggcg tactccatct cgataatcat
     2221 cagccagacc ggccagttcc ttgcgcagtt cgttgcgc
//
LOCUS       DATAVD010001489         3363 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1070715, whole genome shotgun sequence.
ACCESSION   DATAVD010001489 DATAVD010000000
VERSION     DATAVD010001489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3363
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1070715"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..368
                     /locus_tag="VHX39_28605"
     CDS             <1..368
                     /locus_tag="VHX39_28605"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3995155.1"
                     /translation="LHETVARRYCPKANLVGFKTRDECTLALQSGRADAHIQAALLGL
                     STVGKNPSLGPYYLLTNPTVALPSCLGLQREPDTRFKEVINAWLAMNRGTGQLREWML
                     EGLAKFGVTRDQVPPNLTF"
     gene            393..1061
                     /locus_tag="VHX39_28610"
     CDS             393..1061
                     /locus_tag="VHX39_28610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEX3995156.1"
                     /translation="MHYQWDFYFLQRYEPLLWRGVLVTLGYTAVTIVIGLIIGLLLGL
                     GRLSKSRLLNIPLIAFIEVFRCTPLLVQIVWFYYALPVLLGIQIPAVVAGIMTLSCYT
                     GVFYAEIFRGGIISIEQGQWDAARALGLRRWHVMRLVILPQAIRRMIPPFVNQSITQL
                     KNTSLVSTIAVPDLLYNGTLITADTYRPLEVYTVVAVIYFVLLFPSTLLAQAYERHLA
                     KRPK"
     gene            1230..2813
                     /locus_tag="VHX39_28615"
     CDS             1230..2813
                     /locus_tag="VHX39_28615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3995157.1"
                     /translation="MKRRHFLATGLSGLALPSVVRAASATTLKFIPQIDLAFLDPHWT
                     TAYITRGHAYMVFDTLYGQDGTFTPKPQMVEGHVVENDNKLWTLTLRSGLLWHDGTPV
                     LARDCVASIKRWAKRDAFGGTLMVATDELSAPDDKTIVFRLNKPFPLLPAALGKPTSP
                     APAMMPERLAKTDPFKQITEIIGSGPFRFIADERVAGARNVYQRFDKYKPRDGGTPDW
                     TAGPKIVHFDRVEWTTIPDAGTKAAALQAGEHDWWENPTHDLLPLLRRDNNIKIDVIN
                     STGSVNMMRPNHLQPPFNNPKILQALLWAVDQSSFMEAIVGDDPSMYHVPHGFFCPGT
                     PMASDVGLEPLLGPRDPAKVKQMLKQAGYAGEKVTMLVATDYTQFKAIGDVAADMMSK
                     VGMNVDYVATDWGTMLQRRNNKGPADQGGWNCFFTGWEGEDHLDPSNHYAIRGNGNDP
                     AGWPGWCVSPRLEALRNAWFDAPGKEAQRKICVDMQLQCMIDVPSVPLGQFVQPTAYR
                     TSLTGVLRGFPTFWNVRPA"
     gene            2872..>3363
                     /locus_tag="VHX39_28620"
     CDS             2872..>3363
                     /locus_tag="VHX39_28620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosidase"
                     /protein_id="HEX3995158.1"
                     /translation="MPSHLLDTIEGKRLENREVWLQWGPYLAERQWGTVREDYSTDGN
                     AWAYFPFEHARSRAYRWGEDGIAGFTDDRLRWCLSLALWNGRDPILKERMFGLTNAQG
                     NHGEDVKELYYFLDGTPSHSYMRMLYKYPHAAFPYDTLIAENARRGLDQPEYELLDTG
                     VFDE"
BASE COUNT          652 a         1113 c         1014 g          584 t
ORIGIN      
        1 gcctgcacga gaccgtcgct cggcgttatt gcccgaaagc gaacctggtc ggcttcaaga
       61 cgcgcgacga gtgcacattg gcgctgcaat caggccgagc cgatgcgcac atccaggcgg
      121 ctttgctggg gttgtcgacg gtgggcaaga acccgtccct cggtccgtat tacctgctga
      181 ccaacccaac tgtcgccctg cctagctgcc tcgggttgca gcgggaaccg gacacgcgct
      241 tcaaggaagt gatcaacgcg tggctggcta tgaaccgcgg caccgggcag cttcgcgagt
      301 ggatgctgga ggggctggcg aaattcggcg tcacccgcga ccaggtgccg ccgaacctga
      361 cattctgaag cgataggggg aggagtcccg cgttgcacta tcaatgggac ttctacttcc
      421 tgcagcgcta cgaacccctg ctgtggcggg gcgtgctggt caccctgggc tataccgccg
      481 tcaccatcgt catcggcctg atcatcgggt tgctgctggg actggggcgg ctaagtaaat
      541 cgcggctgct gaacatcccg ctgatcgcct ttatcgaggt gtttcgctgc accccgctgc
      601 tggtgcagat cgtctggttc tactacgcgc tgccggtgct gctgggcatc cagataccgg
      661 ccgtggtcgc cggaatcatg accctctcct gctacaccgg cgtgttctat gcggagattt
      721 tccgcggcgg gatcatctcc atcgagcaag gccagtggga tgcggcccga gcgctcggcc
      781 tgcggcgctg gcacgtgatg cgcctggtta tcctgccaca ggcgatccgg cggatgatcc
      841 cgcccttcgt caatcagtcg atcacccagt tgaagaacac ctcgctggtg tccaccatcg
      901 cagtgccgga tctgctgtac aacgggacgc tgatcacggc ggatacctac cggccgctgg
      961 aggtctacac cgtcgtcgcg gtgatctact tcgtgctgct gttccccagc acgctgctcg
     1021 cccaggcgta cgagaggcat ctggcgaagc gcccgaaata gcgggcccgg cacagtgagt
     1081 ccgggacgtc agacaaacgt atcgatgttc gccaccacaa tgatcattcc caaccagcac
     1141 gaaaccggtc tacgcttccg atagggaaag cgtccgtcac tgtatgcaca ggagacacgc
     1201 atggacgcac cctatcagga catagccgca tgaagcggcg tcactttctg gccaccgggc
     1261 tgtctggcct ggcattgccg tccgtcgtcc gcgccgccag cgcgaccacg ctgaaattca
     1321 tcccgcagat cgatctcgcg ttcctcgatc cgcactggac caccgcctac atcacgcgcg
     1381 gccacgccta catggtgttc gatacgctgt acggccagga cgggacgttc acgccgaaac
     1441 cgcagatggt cgagggccac gttgtcgaaa acgacaacaa gctgtggaca ctgaccctcc
     1501 gcagcggcct gctgtggcac gacggcactc cggtcctggc gcgtgactgc gtcgccagca
     1561 tcaagcgttg ggccaaacgt gacgcattcg gcggcaccct gatggtggcg accgatgaat
     1621 tgtcggcgcc ggatgacaag accatcgtgt ttcggctgaa caagccgttc cccctgctgc
     1681 ctgccgcgct gggcaagccg acctcgcccg cgccggcgat gatgccggaa cgcctggcca
     1741 aaaccgatcc gttcaagcag atcaccgaaa tcatcggcag cggcccgttc cgcttcatcg
     1801 cggacgaacg ggtggccggc gctcgcaacg tctaccagcg cttcgacaag tacaaaccgc
     1861 gagacggcgg cacacccgac tggaccgccg gtcccaagat cgttcatttc gatcgcgtgg
     1921 agtggaccac cattcccgat gccggaacga aggctgccgc gttgcaggcg ggcgagcacg
     1981 attggtggga aaatccgacc cacgatctgc tgccgctgct gcgcagggac aacaacatca
     2041 agatagatgt catcaattcc accggcagcg tcaacatgat gcggcccaac cacctgcagc
     2101 cgcccttcaa caacccgaaa attttgcagg cgctgctgtg ggcggtcgac caatcctcgt
     2161 tcatggaggc aatcgtcggt gacgacccat cgatgtacca cgtgccgcac ggcttcttct
     2221 gtcccggcac cccgatggcc agcgacgtcg gactggaacc cctgctgggc ccgcgcgacc
     2281 ccgccaaagt gaagcaaatg ctgaaacagg ccggctacgc gggcgaaaag gtgacgatgc
     2341 tggtcgccac cgactacacc cagttcaagg cgatcggcga tgtcgccgcc gacatgatga
     2401 gcaaggtggg gatgaacgtc gactacgtcg ccaccgactg gggcaccatg ctgcaacgtc
     2461 gcaacaacaa gggaccggcc gaccaggggg gctggaactg cttcttcacc ggatgggagg
     2521 gcgaggatca cctcgatccc tccaaccact atgccatccg aggcaacggc aacgaccccg
     2581 caggctggcc cggctggtgc gtcagcccgc ggctggaggc actccgcaac gcctggttcg
     2641 acgcgcccgg caaggaagcg caacgcaaga tctgcgtgga catgcagctt cagtgcatga
     2701 tcgacgtccc cagcgtgccg ctcgggcagt tcgtccaacc caccgcctac cgcaccagcc
     2761 tgaccggggt tctccgcggc ttccccacgt tctggaacgt ccgccccgcc tgaccggtcc
     2821 gccagctggt ggtcactgtt cgaccacccg cgtttcccga tacaatacgg catgccgagc
     2881 catctgctgg atacgattga ggggaaacga ctggaaaatc gggaggtatg gctccaatgg
     2941 gggccatacc tcgccgaacg ccaatggggg accgtccggg aagactattc gaccgacggc
     3001 aacgcctggg cctactttcc cttcgagcac gcacgcagcc gtgcctaccg ttggggggag
     3061 gacggcatcg ccggcttcac cgacgaccgc ctgcgctggt gcctgtcgct ggccctgtgg
     3121 aacgggcgcg atccgatcct gaaggagcgg atgttcggcc tgaccaatgc ccagggcaac
     3181 cacggcgaag atgtcaagga actgtattat ttcctcgatg gcacacccag ccactcctac
     3241 atgcggatgc tgtataaata tccccatgcg gcgttcccct acgacacgct gatcgccgag
     3301 aacgcccgcc gcggcctgga tcagccggaa tacgaactgc tggataccgg cgtgttcgac
     3361 gag
//
LOCUS       DATAVD010001490         4559 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_888803, whole genome shotgun sequence.
ACCESSION   DATAVD010001490 DATAVD010000000
VERSION     DATAVD010001490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4559
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_888803"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(31..1155)
                     /gene="lpxD"
                     /locus_tag="VHX39_28625"
     CDS             complement(31..1155)
                     /gene="lpxD"
                     /locus_tag="VHX39_28625"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HEX3995159.1"
                     /translation="MAPDPTPFGGDRSALAGDPRFFQRAGPHTLAAVVDAAGVEGELA
                     EAPPRRLMLHRIAPLAVAGGEDVSFCLNNRKYRSALAGTQAAAVIVHPDMRDQVPETA
                     VAIVVPDPMVAWARVAALFHPQTPVKPGIHPSAVVAASAVIDPTTEIGPLAVIGENVT
                     IGPRGRIGAMVVIGDGVQIGRDVRIGPHASLSHALIGDRVYLYPGARIGQDGFGFAIT
                     PQGFQTVPQLGRVLIRDDVEVGANTTIDRGTLEDTVIGAGTRIDNLVQIAHNVQIGRA
                     CVVVAQVGISGSTVLEDQVVFAGQSGTAGHLRIGTGSRIGAQAGVISDVPPRSEMIGS
                     PAQPVKAFFKEVATIRRWVRNGGIPAPTSARDTKKHPDVD"
     gene            complement(1159..1992)
                     /locus_tag="VHX39_28630"
     CDS             complement(1159..1992)
                     /locus_tag="VHX39_28630"
                     /inference="COORDINATES: protein motif:HMM:NF015871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HEX3995160.1"
                     /translation="MALALVFAPVSGFAQQAQSPQWFVPGQTHPSAAPSAHHSVSRAA
                     PTGAPGGLPLTSEGSGEQAGNVPAPQFQLPPAPEIPPIPKGQATPAAIVGILSVPDVL
                     RVSTAYQAAYKELNARGQKLNEDAQKEQTALRELGQTFAAERPKLSPEQIRTKEKEIQ
                     DRATEAQRRFGERNRIIQEAGQYVMLQINRTMEQVAQQVALSRGINLVLNRAQILGTT
                     ADFDITPAVAEVLNKTLPSVVVPPDGVSPLTMAKASSESKKEPKKPEAKPAAAKPPQK
                     H"
     gene            complement(2028..4475)
                     /gene="bamA"
                     /locus_tag="VHX39_28635"
     CDS             complement(2028..4475)
                     /gene="bamA"
                     /locus_tag="VHX39_28635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEX3995161.1"
                     /translation="MVRAVRVVLLGHVSLFERTRRLGETSLLLTIRAVRFVAACLMPL
                     LAIGTAAAQAPTRPARPPVSHAKPAPAPAGGVIQSIKVEGSQRIESGTIKSYLLVQPG
                     DAFDPDRIDRSLKTLYATGLFQDVRLGRVGDTLVVRVVENPIVNRVAFENNHKLSDAQ
                     LRPAIQLRPRAVFTPALAEADRQKILDLYAKRGYYDATVDPKIIHLDQNRVDVVFQIN
                     DGAATLISKIVVTGNKAFSEDRLTEVISSRESRWWRFLSTADQYDPERLSYDKELLRR
                     FYLKNGYADFEVTAASAELSPDRKGFFLSFTIHEGPRYKVGTVTINAQLRNLTNADLQ
                     SSLQLHEGDWYDGDAVGRTADLMEQAVHDRGYAFVSVKPRADRDPVKHIINLAFDVGE
                     GPRVYVERINIVGNTRTEDKVIRREFRLAEGDPYSAAEIRRTKTRLTDLGYFQNVDIA
                     TAPGSTPDKAVLNTTISEKATGELSFGGGYSTDAGALIDIGLSEKNLVGTGINASING
                     TLAQRRSSINTSVTDPYFLDRNLVAGVDAFLIQTDYLGTEPYDEKRVGFALRLGYAFN
                     DHLRQTWSYSLVDRDVFDVETGASPFILSEAGSTLLSQVSQAVTYDRRDSKIEPHNGY
                     VVEVGTDFAGLGGDVRFLRGNLNAAYYIPFANPDWGLKFGGSTGYMDLLPGGREEIID
                     RFFLGGDNLRGFETGGAGPHDATTGDPLGGRFIWTQTTEMRFPLPVSPDLGLSGRAFI
                     DVGALTDSSFRPGTCIVSAGVSCKIEASDAPRVGAGVGISWHTAFGLINVDLAPFVIK
                     QPGDQTQIFRFGFGTRF"
BASE COUNT          773 a         1445 c         1486 g          855 t
ORIGIN      
        1 gcatctgcgc tgcggcctca tccatgatgt tcaatccacg tccgggtgct tttttgtgtc
       61 tcgtgcgctg gttggtgccg gaataccgcc attgcggacc cagcgcctga tcgtcgcgac
      121 ttccttgaag aacgccttca ccggctgagc cggggagcca atcatctccg accgcggcgg
      181 cacatcggag atgacccccg cctgtgcccc gatgcgcgat ccggtgccga tccgcaaatg
      241 tccggcggta cccgactgcc ccgcgaacac cacctgatcc tccagcacgg tcgagccgga
      301 gataccgacc tgagccacca cgacacaggc cctgccgatc tggacgttgt gggcgatctg
      361 caccagattg tcgatccttg tgccggcgcc gatcacggtg tcttccagcg tgccgcgatc
      421 gatcgtggtg ttggcgccga cctcgacatc gtcgcggatc agcacgcgac ccagttgcgg
      481 gacggtctgg aagccctggg gggtgatcgc gaagccgaag ccgtcctggc cgatgcgggc
      541 gccgggatac aaatagacgc ggtcgccgat cagcgcgtgc gacaggctgg catgcgggcc
      601 gatccgcaca tcccggccga tttgcacccc gtcaccgatc accaccatgg ctccgatccg
      661 gccacgcggg ccgatcgtca cgttttcgcc aatgaccgcg agcgggccga tctccgtggt
      721 cgggtcgatc accgccgagg cagcgacgac ggcagacggg tggataccgg gtttgaccgg
      781 cgtttgcgga tggaacaggg ccgccaccct ggcccaggcg accatcgggt cgggcacgac
      841 gatggcgacg gctgtttcgg gtacctgatc gcgcatatcg ggatgcacga tcaccgcggc
      901 agcctgggtc ccggctaggg ccgaacggta tttccggtta ttcaggcaga agctgacgtc
      961 ttcgccgccg gccacggcca ggggggcgat acgatgcagc atcagccggc gcggcggggc
     1021 ctcggccagt tctccctcaa cccctgccgc gtcgacgacg gcggccaggg tatgcggtcc
     1081 ggcccgctgg aagaagcggg gatcgcccgc caacgccgag cggtccccac cgaacggcgt
     1141 tggatcaggc gccatggctt agtgcttctg cggcggcttg gcggccgctg gcttggcctc
     1201 gggcttcttc ggttccttct tcgattccga cgaagccttg gccatcgtca gcggcgagac
     1261 accgtccggt ggcacgacaa cgctgggcag ggtcttgttc agcacctcgg ccaccgccgg
     1321 ggtgatgtcg aagtccgccg ttgtccccag gatctgcgcg cggttcagca ccaggttgat
     1381 gccgcgggac agtgcgacct gctgggcgac ctgctccatg gtgcggttga tctgcagcat
     1441 gacgtattgg ccggcttcct ggatgatgcg gttacgctcg ccgaagcggc gctgcgcctc
     1501 ggtggcgcga tcctggattt ccttctcctt ggtgcggatc tgttccggcg acagcttggg
     1561 acgttcggcg gcgaaggtct ggcccagctc gcgcagagcc gtctgttcct tttgcgcgtc
     1621 ttcgttcagc ttctgaccgc gggcgttcaa ctccttgtat gccgcctggt aagcggtgga
     1681 gacccgcagc acgtcgggca ccgacaagat gccgacaatg gcggccgggg ttgcctgccc
     1741 cttcggaatg ggcggaattt ccggtgccgg cggcaactgg aactgcggcg ccggcacgtt
     1801 gccggcctgc tcgccgctgc cttcgctggt cagcggcaac ccgccggggg cccccgtcgg
     1861 agcggcccgc gacacactat ggtgcgcgga cggtgccgcg gacgggtgtg tctgtcccgg
     1921 cacaaaccat tgcgggcttt gcgcctgctg ggcgaacccg gaaaccgggg caaaaaccag
     1981 cgccagcgcc aaaaccgcgc cggcgccttt attgaaactt tgaatcacta gaacctcgtg
     2041 ccgaagccaa accggaagat ttgtgtctgg tcacccggtt gcttgatcac aaacggcgcc
     2101 aaatcaacat ttatcagacc aaatgcggta tgccaggaga taccgacacc cgcgccaacc
     2161 cgtggcgcgt cggacgcctc gatcttgcag cttacgccgg ccgacacgat gcaggtgcct
     2221 ggcctgaacg acgaatcggt cagtgcgccc acatcgataa aggcgcgccc gctgaggccc
     2281 agatcggggg agaccggcag tgggaagcgc atttcagtcg tctgcgtcca gatgaaacgg
     2341 ccgccgagcg ggtcgcccgt cgtcgcgtca tgcggcccgg caccgccggt ttcgaagcca
     2401 cgtaaattgt cgccgccgag gaagaaacgg tcgatgattt cctcccgtcc acccggcagc
     2461 agatccatgt aacccgtgct gcccccgaat ttgaggcccc agtcgggatt cgcaaacgga
     2521 atgtagtaag ccgcgttcag attgcccctc aaaaaacgga catcgccacc aagaccggcg
     2581 aagtcggtgc cgacttcgac gacatagccg ttgtgtggct cgatcttgct gtcccggcga
     2641 tcgtaggtca cggcctggct gacctgggag agcagcgtcg atcccgcctc actcagaatg
     2701 aagggactgg cgcccgtttc gacgtcgaac acgtcgcgat cgaccagcga gtagctccag
     2761 gtctgccgca gatgatcgtt gaacgcgtag ccgagacgca gcgcgaatcc cacccgtttc
     2821 tcatcatagg gttcggtgcc cagatagtcc gtctggatca ggaaggcgtc gacgccggcg
     2881 acgagattgc ggtcgaggaa gtaaggatcg gtcaccgagg tgttgatgga actgcgacgc
     2941 tgcgccagcg taccgttgat gcttgcgttg atgccggttc ccaccaggtt tttctcggac
     3001 aggccgatat cgatcagggc gccggcatcg gtcgagtaac cgccgccgaa ggacagttcg
     3061 cccgtggcct tttccgaaat ggtggtgttg aggacggcct tgtccggcgt ggagcccggc
     3121 gcggtcgcga tatcgacatt ctggaaatag cccagatcgg tcagccgggt cttggtgcgg
     3181 cggatctccg cggcgctgta cgggtcgcct tcagccagcc gaaactccct tcggatgact
     3241 ttgtcctcgg tccgggtgtt gccgacgata ttgatgcgct cgacatagac ccgcggcccc
     3301 tcacccacgt cgaaggccag gttgatgatg tgcttcaccg ggtcgcggtc ggcgcgcggc
     3361 ttgacgctga cgaaggcata gccgcggtca tggacggctt gctccatcaa gtcggcggtg
     3421 cggcccaccg cgtcgccgtc gtaccagtcg ccttcatgca gttgcaggct ggattgcagg
     3481 tccgcattgg tgaggttgcg caactgtgcg ttgatggtga ccgtgccgac cttgtagcga
     3541 ggcccttcat ggatcgtgaa ggacaggaag aaccccttgc ggtcgggcga cagttccgca
     3601 ctggcggcgg tcacctcaaa gtcggcgtag ccgtttttga ggtagaaccg gcgcagcaat
     3661 tccttgtcgt aggacagcct ttccggatcg tattgatccg ccgtggacag gaagcgccac
     3721 caacgcgatt cgcggctgct gatgacttcg gtcagccggt cttcactgaa cgccttgttg
     3781 ccggtcacca cgatcttgct gatcagggtg gccgccccgt cgttgatctg gaacaccaca
     3841 tcgacgcggt tttggtcgag gtggatgatc tttgggtcca ccgtcgcgtc gtagtagccg
     3901 cgcttggcgt acagatccaa gatcttctgc cggtcggcct ccgccagggc cggcgtgaac
     3961 acggcgcgcg gccgcagctg tatggccggc cgaagctggg cgtcgctcag cttgtgattg
     4021 ttttcaaacg ccacgcggtt gacgatcgga ttttcgacca cgcgcaccac cagggtgtcg
     4081 ccgacgcggc ccaggcggac gtcctggaac agcccggtgg catagagcgt tttcaggctg
     4141 cggtcgatgc ggtccgggtc gaaggcgtca cccggctgaa ccagtagata ggacttgatc
     4201 gtgccgctct cgatccgctg gctgccctcg accttgatcg actgaataac cccgcctgcc
     4261 ggcgccggag cgggcttcgc gtgggagacg ggggggcgag cgggccgggt cggggcttgg
     4321 gcggcggcgg ttccaatggc cagtaaaggc atcaggcacg cggccacaaa ccgcacagcg
     4381 cgaatcgtca acaaaaggct ggtctccccc aaacggcgcg tgcgttcaaa cagactaacg
     4441 tggccaagca gcaccacgcg aacggcgcgc accataacga tgggctgtca ccgatgctag
     4501 tggcgctgtt tgccgtcggc ccgtctgtca ctctttgttt aagtttttga tttggaaaa
//
LOCUS       DATAVD010001491         2055 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3302791, whole genome shotgun sequence.
ACCESSION   DATAVD010001491 DATAVD010000000
VERSION     DATAVD010001491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3302791"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            323..>2055
                     /locus_tag="VHX39_28640"
     CDS             323..>2055
                     /locus_tag="VHX39_28640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995162.1"
                     /translation="MNIQVYMSPSIAITSVMVGGAGSEALAGLGITGGTFTGTPVNGT
                     VSGNNVTFNNVPTSVGAFTIAITNIRINASQIASANNVPTAVSEAIFLGGSAVTPTVL
                     QANYVAFALPGLTGITATGTTSFPVCSAISSAAPAFSVHFAEQFAPAFMAQGSAVSNS
                     TLGSEFTFDTETGFGIASNGFSNTASAGTRIKIVFSNVPANLTLAVPESIANSGGTMI
                     LTASETGPFSEVPVSAAPNLVVLSVVNGTATAIYEETTSAPQTIESYTVPVYLTGAAG
                     AVPSQASAIAATVSFAPIGATANLPNFVSGSSTVTVNGANLSACGSTIAFPSLTSVPF
                     GTGNVNLSATSNSPAPITFSSTTPSVCSVAGSVVSVVAGGSCSITASQAANPYYAAAN
                     PIVESFTVTPGSQTINFGSIGNVPFGAATVAVSATASSGLPVSFSSSTPAVCTVSVAN
                     VALVAPGLCTIVASQAGNPSYAAAPTAQQSFTIAQTSQTIAFDQIPNQLLGISPFAIA
                     AQSTSGLTVGVTSTTTPVCKVSGRIVTLLGTGTCSLKATQAGNANFGAATVTQNFTVS
                     QAKPSGGLNAAA"
BASE COUNT          406 a          694 c          549 g          406 t
ORIGIN      
        1 caacgacacg ttatttgctc cctccgtcag cgcgagctcc gggcttccgg tgacgctggc
       61 ttccagttcc cttaacatct gcacggtctc tggcggcaat gtgaccctga tcgcatccgg
      121 tacctgtact ctcacggcga gccagcccgg gaattccagc tatgtggccg cagcctcagt
      181 gacgcgcagt ttccaggttg ttatggcgac aggcgctgcc atatgcacag cctcatcgca
      241 agcgatcttc gtgcggagtg agggaacaac ggaacaggtt gcggatacaa ctttgagttg
      301 caccggtgga aatggcctgc cgatgaacat acaggtctac atgtctccct ccatcgcgat
      361 tacgagcgtc atggtcggcg gcgctggttc tgaggcgttg gcgggcctgg gaatcactgg
      421 cggtacattc accggtacgc cagtcaatgg aacggttagc ggcaacaacg tgacgttcaa
      481 caatgtgcca acttccgttg gcgccttcac gatcgccatt acgaacataa ggatcaacgc
      541 atcgcagatt gcctcagcca ataacgtgcc gaccgccgta tctgaggcga tcttcctggg
      601 tggcagcgcc gtcaccccga ctgtcctgca ggcgaattac gttgccttcg cgctacccgg
      661 gctcacgggc atcaccgcaa ccggaaccac gtcgtttccg gtatgcagcg caatcagctc
      721 tgctgcgcct gccttcagcg tccacttcgc ggagcaattc gcccccgcat ttatggccca
      781 gggcagcgcc gtctccaatt cgactctcgg gtccgaattc actttcgata ccgaaaccgg
      841 tttcggtatc gcatcgaacg gattttccaa cacagcaagc gcaggcacgc gcatcaaaat
      901 agtgttcagc aatgttccgg caaacctgac gcttgctgtg ccggagtcca tcgccaacag
      961 tggcggcaca atgattctga ccgcttccga aaccggtccg ttctcagagg tcccggtttc
     1021 agcggcgccg aatctcgtcg tgctctccgt cgtcaacggc acggcaactg caatctacga
     1081 agaaacaacc tcagcacccc agacaatcga gtcctacaca gtgccggtct atctgactgg
     1141 cgccgccggc gccgtcccat cgcaggcatc ggccatcgcc gcgacagtca gctttgcgcc
     1201 gatcggcgcg accgcaaacc ttccgaactt tgtcagtggc agcagcacag taaccgtaaa
     1261 cggcgccaac ctaagtgcgt gcggttcaac catcgccttc ccgtcactga cgagcgttcc
     1321 attcggcact ggcaatgtaa acctgagcgc gacatcgaat tcacccgcgc cgataacctt
     1381 ctcttcgacc acgccctccg tctgctcggt agcgggcagc gtcgtatcgg tcgtcgcggg
     1441 aggttcctgt tccatcacag ccagtcaggc tgcgaacccg tactatgcgg cggcaaatcc
     1501 catcgtcgag tccttcaccg tgacgcccgg ctcgcaaacg attaacttcg gatcgatcgg
     1561 caacgtgccg ttcggtgcgg cgacggtcgc cgtttccgcc acagcctcgt ccggcctgcc
     1621 cgtgtcattc tcttcatcga cccccgcggt ctgcaccgtc tcggtcgcaa acgtggccct
     1681 ggttgcgccg gggttgtgta ccatcgtcgc cagccaggcg ggcaatccga gctacgcggc
     1741 agcgcccact gcacagcaaa gtttcacgat cgcgcagacg tcgcagacca tcgcgttcga
     1801 tcagatcccg aaccagcttc tcggcatttc gccattcgca attgccgcgc aatcgacctc
     1861 cggcctcacc gttggcgtca cctcgacaac aacgccggtc tgcaaagtct ccggcagaat
     1921 cgtaacgctt ctgggcacgg gcacgtgttc gctgaaagca acacaggccg gcaacgcgaa
     1981 cttcggcgca gccaccgtaa cacagaactt caccgtcagc caggcaaagc cctccggcgg
     2041 cctgaacgcc gctgc
//
LOCUS       DATAVD010001492         5108 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2748409, whole genome shotgun sequence.
ACCESSION   DATAVD010001492 DATAVD010000000
VERSION     DATAVD010001492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5108
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2748409"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..314)
                     /locus_tag="VHX39_28645"
     CDS             complement(<1..314)
                     /locus_tag="VHX39_28645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995163.1"
                     /translation="MEPYWCGVEWNWQTGRKGRPVVLASDRHVSIFGPTRCGKGITNE
                     AVNLLWGGDPALYRLAGLPVLGRRFRCDSTFNIDPKLQNCAICMKWCSRFSTVWVLNP
                     RG"
     gene            complement(398..1018)
                     /locus_tag="VHX39_28650"
     CDS             complement(398..1018)
                     /locus_tag="VHX39_28650"
                     /inference="COORDINATES: protein motif:HMM:NF015642.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein"
                     /protein_id="HEX3995164.1"
                     /translation="MKTRRRRPTPAGRGLSLEQLDDWFLALEPPARVEGVSMLDGYLT
                     AIIIGPRSIPPDEWFDDLFGARGNIAVASGTMMTAITSIVARFNAISEGLSAEPPRHA
                     PIFRKTDDGLAVPHLWCMGFLAGMRLRMDAWRPLLDLNRIDHGLMLPILLYCVDPSGR
                     PMLGPPREGPETEEFLRTAYQDIPIVVPAIREFWMPERVREANGQR"
     gene            complement(1015..2568)
                     /locus_tag="VHX39_28655"
     CDS             complement(1015..2568)
                     /locus_tag="VHX39_28655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HEX3995165.1"
                     /translation="MSSGVSSLPRDPDILIEMISGLRAENEKLRAMLETLKRTLYGAR
                     SERRAADEAQLALGLGDLSALPVEPEPEAATAAGQGQPKPLRPKAARNIGGLPNHLPR
                     EDVVIEPESDTCPCCQGKLHRIGEDVSETLDIVPAIIRVKRIRRPKYGCRACESAVVQ
                     APAPPRPVDGGLPTAALLAHIAVSKFAWHLPLHRQTQMLAGHGIHLDRSTLVHWIERA
                     AWWLKPLHDLLLETVMAAGKIFCDDTPLPVLDRSRKRTRIGRIWCYALDDRPWSGAAP
                     PVLVYLYAPDRRGSHLEDHLRGFHGVLQVDGYAGYDKLARPGRAAGVIKLAYCLAHAR
                     REFFDVHKRTKDPVAEEAMRRISEVYAIEARIRGRAAGDRVAVRQAETRPLMEALWSW
                     LMERLEEISAKSSLAGAIRYTLGHWKGLTLFLSDGRVEVDNNTVERGIRPIPLGRKNS
                     LFAGSDSGGERWAVLASLINTAKLHGIDPQTYLADVLDRIVSGRTKVNALRELLPWEW
                     KAAREAAVA"
     gene            complement(2627..2944)
                     /gene="tnpB"
                     /locus_tag="VHX39_28660"
     CDS             complement(2627..2944)
                     /gene="tnpB"
                     /locus_tag="VHX39_28660"
                     /inference="COORDINATES: protein motif:HMM:NF017528.4"
                     /note="TnpB, as the term is used for proteins encoded by
                     IS66 family insertion elements, is considered an accessory
                     protein, since TnpC, encoded by a neighboring gene, is a
                     DDE family transposase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HEX3995166.1"
                     /translation="MVACKPVDFRKGMNSLTALVTQALAADPFAGDVFIFRSRRSDRL
                     KLLIWDGTGLCLVTKRLESGGFTWPPVRDGAVTLNQTQLRLLFTGMDWTQIGPRTAVM
                     ASK"
     gene            complement(2980..3429)
                     /locus_tag="VHX39_28665"
     CDS             complement(2980..3429)
                     /locus_tag="VHX39_28665"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX3995167.1"
                     /translation="MDNASLNAMHQDRHQADAYRRIELITGTVRRRRWTNDEKATIVA
                     ESTRPGVNIAEVARRFGVNRGLLQTWRRKAIGERPVFVPLRAEGMVAADNNKDRTNTA
                     RSVAMETAAPTRPGTVEIESGGVRVRFTGPVDATTLRLVMMHIGRQT"
     gene            complement(3701..3989)
                     /locus_tag="VHX39_28670"
                     /pseudo
     CDS             complement(3701..3989)
                     /locus_tag="VHX39_28670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611992.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
     gene            complement(4214..4891)
                     /locus_tag="VHX39_28675"
     CDS             complement(4214..4891)
                     /locus_tag="VHX39_28675"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3995168.1"
                     /translation="MGELVASIAHEINQPLAGVAARANACLRWLAGNKPDLDAARESV
                     SRIVRDAHRASDVIRSLRALTKKSGPQLVPLDINDAIQEVLALTGSELRQYGIALRTD
                     LSLEVGPVLGDRVQVQQVLLNLITNAVDAMSAVMDHPRELTLSSARTEGDGLIVTIAD
                     AGTGLDPMIAERIFEPFFTTKSEGLGMGLSICRTIIESHGGGLWVSPNVPCGTIFRFT
                     VPGVPPD"
     gene            4862..>5108
                     /locus_tag="VHX39_28680"
     CDS             4862..>5108
                     /locus_tag="VHX39_28680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995169.1"
                     /translation="MSDGGDQLAHCCQPCDPNKFRLYGSQRLLGAPAPGDVHDRPDEF
                     ESSGLGVFGLANTLHVLDRSVGQNDSVFMFKSASLAHG"
BASE COUNT          990 a         1656 c         1495 g          967 t
ORIGIN      
        1 atgccgcgtg ggttcagcac ccagaccgtg ctgaagcgcg agcaccattt catacagatc
       61 gcacaatttt gcagcttggg atcgatgttg aaggtgctat cgcagcggaa gcggcggcct
      121 agcacaggca gaccagccag ccgatacagc gccggatcgc cgccccaaag cagattaacg
      181 gcctcgtttg ttattccctt gccgcaacgg gtggggccga aaatagagac gtgccgatca
      241 gatgcaagca cgaccggacg ccctttgcgt ccggtctgcc agttccattc cacgccgcac
      301 caatagggtt ccatgattaa cctctcagtg ccgcttggcc ggtttccagt tgaattcgtg
      361 ctgggcaatt gtaaccggtg cgagaagcgc acgaccgtca gcgttgaccg ttcgcctcgc
      421 gcacccgttc cggcatccag aactccctga tcgcaggcac aacaatcggg atgtcctggt
      481 acgccgtgcg gaggaactct tcggtctcgg gtccctcccg aggcggtccg agcatcggac
      541 ggcctgatgg atcgacacag taaagtagga tcggcaacat cagcccgtga tcaatgcggt
      601 tcagatccag cagtggccgc caggcatcca tccgtaaccg catccccgcc aggaacccca
      661 tgcaccagag gtgcggcacc gcgaggccgt catccgtttt ccggaagatc ggtgcatgcc
      721 gtggaggttc cgcagacagc ccctcactga tcgcgttgaa ccgcgcgacg atcgacgtga
      781 tcgctgtcat catcgtgccc gacgcgacgg cgatgttgcc ccgcgccccg aacaggtcgt
      841 cgaaccattc gtcgggcggg atcgatcgcg gcccaatgat gatggcggtc agatatccgt
      901 ccagcatcga gacgccttcg acccgtgccg gaggctcaag cgcgaggaac cagtcatcca
      961 gctgctcgag gctcaaacct cgcccggccg gcgtggggcg tcggcggcgg gtcttcatgc
     1021 gacagcggcc tcccgcgccg ccttccattc ccagggcaac agttcgcgca acgcattcac
     1081 cttggtgcga ccggagacga tgcgatcgag tacatcggcg aggtaggtct gaggatcgat
     1141 gccatgtagt ttggcggtgt tgatcagtga cgccagaacg gcccatcgct cgcctccgga
     1201 atcggacccc gcgaagagac tgttcttccg tcccaacgga atcggacgga tgccccgctc
     1261 gaccgtatta ttgtccactt ccacccggcc gtcggacaag aacagcgtca gtcccttcca
     1321 gtgaccgagg gtgtaacgga tcgcgcccgc cagcgatgac ttcgcggaga tttcctccag
     1381 ccgctccatc agccacgacc acagcgcctc catcagcggc ctcgtctccg cctgacgcac
     1441 cgcaacccga tcgcccgcgg cacggccacg gatgcgcgcc tcgatggcat aaacctcgct
     1501 gatccggcgc atggcctctt cggcgaccgg gtctttcgtc cgcttgtgca catcgaagaa
     1561 ttctcgccgg gcgtgcgcga gacagtaagc gagtttgatc acgccggccg cccggcctgg
     1621 tctggccagt ttgtcatagc ccgcgtagcc gtcgacctgc agcacgccgt ggaagcccct
     1681 gagatgatcc tcgagatgag acccgcgacg atccggcgcg taaagataga ccaggactgg
     1741 cggcgcggca ccgctccagg gccggtcgtc cagtgcatag caccagatcc ggccaatccg
     1801 cgttcgcttg cgcgaacgat ccagcacggg tagcggcgtg tcgtcacaga agatcttgcc
     1861 cgctgccatg acggtttcga gcaggaggtc atgcaaaggc ttcaaccacc aggccgcgcg
     1921 ctcgatccaa tgcaccaacg ttgaacgatc gagatggatg ccgtggccgg ccagcatttg
     1981 ggtttgacgg tgcaatggca ggtgccaggc gaacttcgac accgcgatgt gtgccagcaa
     2041 cgcggccgtg ggcaacccgc catcaacagg ccgtggcggc gccggcgcct gcaccaccgc
     2101 actctcacag gcacggcagc catatttcgg ccggcggatg cgtttgaccc ggatgatcgc
     2161 cggcacgata tccagggtct cactgacatc ctcgccgatc cgatgcaatt tgccctggca
     2221 gcacgggcaa gtgtcactct cgggctcaat gacgacatct tcgcgcggca aatgatttgg
     2281 caggccgcca atgttgcgcg ctgcctttgg tcggagcggt ttcggctggc cttgacctgc
     2341 cgccgtcgcg gcctccggtt cgggctcgac cggaagtgct gacagatcac ccagtccaag
     2401 cgccagttgc gcctcatcgg cagcgcgcct ttccgaacgc gcgccataca gcgtccgctt
     2461 cagcgtctcc agcatcgcgc ggagcttttc gttctcggcg cgcaaccctg agatcatctc
     2521 aatcaggatg tccggatcgc gcggcaatga agagacgccg gatgacatgc attgattcta
     2581 ccggaccgat tcggggtgcc gccaggtccg aaatgcgaag accgaattat ttcgacgcca
     2641 tcaccgccgt gcgcgggccg atctgtgtcc aatccatgcc ggtgaataac agtcgcaact
     2701 gcgtctggtt cagagtcaca gcgccatcac gcaccggtgg ccatgtgaag cccccgctct
     2761 ccaggcgttt cgtgaccaga cacaggccgg tgccatccca gatcagcaac ttcaatcgat
     2821 ccgaccgacg ggaccggaag atgaaaacat cgcccgcaaa gggatcagca gcgagtgcct
     2881 gtgttacgag cgcggtcagg gaattcatgc ccttgcggaa gtcgaccggt ttgcacgcga
     2941 ccatgatccg tagccctggt cgggacggaa caccaaggat cacgtctgtc ggccgatgtg
     3001 catcatgacc agacgcaacg tcgtggcatc gaccggcccg gtgaagcgca cacgcacgcc
     3061 accactttcg atctcgacgg ttcccgggcg ggtcggggcg gcagtctcca tcgcgacgct
     3121 tcgcgccgtg ttggtccggt ccttattatt gtccgccgcg accatgccct cagcgcgaag
     3181 tggaacgaaa accggcctct caccgatcgc cttgcgccgc caggtctgca acagcccacg
     3241 attgacaccg aaccggcgcg cgacctccgc gatattgacc ccaggtcgcg tgctttccgc
     3301 gacgatcgtt gccttctcat cgttggtcca tcgacgccga cgcaccgtcc cggtgatcag
     3361 ctcgatccgg cgatatgcat cggcctggtg cctgtcctga tgcatggcat taaggctggc
     3421 attatccatc gttccacccg cgctgtcctg atgagccaca gcttcgacgg atcaacgccg
     3481 cgtcgcatag gtgccgaact cgcaccggtt accattgaac caacattcgc gcacgtcgtg
     3541 tcgatcacac aatccactgg gcgcatgtct cctgccgcca gatgttgaag gccttagccc
     3601 gaactgctcg gtaggatgtg gcggtcatta agtgtcggcg tggatggaag tggccatgga
     3661 taaatgcgtg agaggaaaga aagttctgag cctgctccgg cgatttgaat cgttgcatat
     3721 gccgttcccg acggcgggtc ggccgatgtg agttttccgc gcggttgttc aaataccggc
     3781 tctgacgatg ttcaaccttt ggaagcaatg cgcgctgagc cacaccgtag cttcgcagct
     3841 tatcggtcac gatcacgcgc gggacatatt gaaggccttc cagcagccgg cgaaagaaac
     3901 ctttggcggc gttggcatcc cttcgtggct gaacgagaat gtcgagcacg acgccgttct
     3961 ggtcaacggc acgcccaaag atagtgctgg atatggctga atccgagctg gctgtcctgt
     4021 cctctctgtg cctcgacagg cggattccag atcaaccaac tggaagttgg gacacaatgc
     4081 gaaacatgcc acggctgatt cgcgattcac caccgtcgac tcccgcgtca aactaaagag
     4141 gctttacccg gcaatatcaa tgactcgacc gactatggcg ttgactgtcc ttccacttgc
     4201 cagtcgattc gaattaatcc ggcggtactc cgggcacagt gaatcggaag atggtgccac
     4261 acggcacatt cggcgatacc cacaagcctc ccccatgcga ctcaatgatt gtgcggcaaa
     4321 tcgaaagtcc catgccaagt ccctcggact tcgtcgtgaa gaaaggctcg aagatccgct
     4381 ccgcgatcat tgggtccagc ccagtaccag cgtccgcgat cgtaacaatc aagccatccc
     4441 cctctgtgcg cgcggaggac agggtcaact ccctggggtg gtccatgacc gcactcatcg
     4501 cgtcgaccgc gttcgtgatc agattcagca gaacttgctg gacttgcact cgatcaccga
     4561 gcacaggccc aacctcgagg gaaagatcag tgcgcagtgc aatgccgtac tgccgcagct
     4621 cgctgccggt gagggccagc acttcctgaa tcgcgtcgtt gatgtcgagc ggcaccagtt
     4681 gtggtccgga tttcttggtc agcgcccgaa ggctccggat cacatcgctc gcacggtgcg
     4741 cgtcccgcac aatgcgcgag acggactcgc gcgctgcgtc gaggtcaggt ttattccccg
     4801 ccagccagcg cagacaggcg ttggcgcggg ccgcgacccc ggcaagcggc tgattgatct
     4861 cgtgagcgat ggaggcgacc agctcgccca ttgttgtcag ccgtgcgacc cgaacaagtt
     4921 ccgcctgtac ggttcgcagc gcctcctcgg cgcgcctgcg cccggtgatg tccatgaccg
     4981 tcccgacgaa ttcgagagct ccggcctcgg tgttttcggg ctggccaaca ctttgcatgt
     5041 acttgatcgc tccgtcgggc agaacgattc ggtattcatg ttcaaatcgg cttcgctcgc
     5101 gcacggcc
//
LOCUS       DATAVD010001493         4671 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2748561, whole genome shotgun sequence.
ACCESSION   DATAVD010001493 DATAVD010000000
VERSION     DATAVD010001493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4671
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2748561"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..847
                     /locus_tag="VHX39_28685"
     CDS             <1..847
                     /locus_tag="VHX39_28685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003629438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX3995170.1"
                     /translation="LHLDHLDPKVLHERLPGISETAKIFAGVDVTKDPIPVLPTVHYN
                     MGGVPTNLRTEVLRPTKDNPDAVVPGLMAVGEAACVSVHGANRLGTNSLLDLVVFGRA
                     AAHHAAETIKPGARQAALPAKAGEATLDRFDRTRHAKGGTKVAELRLTMQRTMQAHAA
                     VFRTAKSMTEGVDKMKKVWSGMSDMSVSDRSLVWNSDLMEALELHNLMGNAMTTMVGA
                     EARLESRGAHAHDDYPDRDDQNWMKHTLAWCGDDGATKLDYRPVKMQTMTNEVSVFPP
                     KKRVY"
     gene            981..1763
                     /locus_tag="VHX39_28690"
     CDS             981..1763
                     /locus_tag="VHX39_28690"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (ubiquinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HEX3995171.1"
                     /translation="MVAFNLPLNSRVGQGQTFKAPAGAKRVRDFKIYRWSPDDGKNPH
                     TDTYEVDLDACGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGGNTLACLK
                     PIEDVKGSVKISPLPHMPVVKDLVPDLSQAYAQYNSIKPWMQADSPAPPDGERLQSKE
                     ERAKLDGMWECILCFCCSTSCPSYWWNGDRYLGPAVLLAAYRWIADTRDEATGQRLDE
                     LEDPFKLYRCHTIMNCTDTCPKGLNPAKAIGAIKQLIVERQG"
     gene            1838..2536
                     /locus_tag="VHX39_28695"
     CDS             1838..2536
                     /locus_tag="VHX39_28695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3995172.1"
                     /translation="MIEVWTWPTPNGHKIHIALEELELPYKVVPINIGKGDQFRPEFL
                     AITPNHRIPAIVDPDGPGGKPLKLFESAAIMIYLSEKTGGKLMPADPVGRYICLQWMM
                     FQMGGTGPMFGQYNHFANYAVEKIPYAIERYTNEVKRLHRVLDKRLAETEYLAGAAYS
                     MADIINFPWIRNPERRNIDLAEYPNVKRWHDAVAARPAVQRGVEVLSENQRRGQMTDA
                     EREVMFGKTQFQAR"
     gene            2898..4271
                     /locus_tag="VHX39_28700"
     CDS             2898..4271
                     /locus_tag="VHX39_28700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PleD family two-component system response
                     regulator"
                     /protein_id="HEX3995173.1"
                     /translation="MTARILIVDDMPANTRLLEAKLAAEYYQVSSARDGFEALGIARD
                     WQPDLILLDVMMPGMDGYECCRQLKDDAVTLHIPVVMVTALGESGERLRGLDAGADDF
                     LTKPVDYDTLMARVRSLVRLKRLLDEWRARGDTARALGLSTDRVLIPSIAGARALVID
                     DWDQSAQNIQDALAGDGVISAHARDCAEATRMTAAVNFDLLVVNLSLADEDPLKLVSI
                     LRASDVTHETPLLLVGEPGEKDRILRGFELGANDWLVQPIDAQELRARARNQVRRKFY
                     QDRLRSDLGTALEMALTDPLTGLYNQRYLHRHLSSLMDSGQGRQLAVLMVDVDHFKSV
                     NDRYGHASGDRALRLIADSLRINTRVFDSVARYGGEEFVVVMPSTGPAEAAAAAERLR
                     LAIQEIEFHAAANLHMTLTVSVGVACTSAVTALPEVLLQAADAALYDAKRNGRNRVEM
                     ARTAEAI"
     gene            complement(4264..4431)
                     /gene="rpmG"
                     /locus_tag="VHX39_28705"
     CDS             complement(4264..4431)
                     /gene="rpmG"
                     /locus_tag="VHX39_28705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010233410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEX3995174.1"
                     /translation="MAKSNTVQIKLVSTADTGFFYVTKKNARAQTTKLELNKYDPVVR
                     KHVPFKEAKIK"
BASE COUNT          968 a         1505 c         1399 g          799 t
ORIGIN      
        1 cctgcacctg gatcacctcg atcccaaggt gctgcacgaa cgcctgccgg gcatttccga
       61 gacggcgaaa atcttcgccg gcgtcgatgt gacgaaggat ccgatcccgg tcctgccgac
      121 ggtgcattac aacatgggcg gcgtgccgac caacctgcgg accgaagtgc tgcgcccgac
      181 caaggacaac cccgatgcgg tggtccccgg gctgatggcg gtgggtgagg cggcgtgtgt
      241 atcggtgcat ggcgccaacc ggttggggac gaattccttg ctcgatctgg tggtgttcgg
      301 ccgcgctgcg gcccatcacg cggcggagac gatcaagccg ggcgcccggc aggctgcgct
      361 gccggcgaag gccggagagg cgacgctgga ccggttcgac cggacccgtc acgccaaggg
      421 cggcaccaag gtcgccgaac tgcggctgac gatgcagcgc accatgcagg cccacgcggc
      481 ggtgttccgc accgccaaga gcatgaccga aggcgtcgac aagatgaaaa aggtctggag
      541 cggcatgagc gacatgtctg tctccgaccg cagcctggtg tggaacagcg acctgatgga
      601 ggcgttggaa ctgcacaacc tgatgggcaa cgcgatgacc accatggtcg gcgccgaagc
      661 ccgcctggaa agccgcggcg cccacgcaca cgacgattat cccgaccgcg acgaccagaa
      721 ctggatgaag cacaccctcg cgtggtgtgg tgacgacggc gccacgaaac tcgattaccg
      781 cccggtgaag atgcagacga tgaccaacga agtctcggtc ttcccgccca aaaagcgggt
      841 gtactgatac gaccctattg gtcatcgtaa ggagcgagcg gcgcggcagt ccccatcccg
      901 tcccccactg ccccgggacc taccacgccg cgcgcaatga caaacaccga ccccagacca
      961 ttccttagga tcacaagacg atggttgctt tcaatctccc cctgaacagc cgcgtcggcc
     1021 agggccagac cttcaaggca ccggccgggg ccaagcgcgt ccgggacttc aagatctacc
     1081 gctggagccc cgacgacggc aaaaatcccc acaccgacac ctatgaggtc gatctcgacg
     1141 cctgcggccc catggtcctg gacgcgttga ttaaaatcaa gaatgagatc gatccgaccc
     1201 tcaccttccg ccgctcctgc cgcgagggca tttgcggctc ctgcgcgatg aacatcgacg
     1261 gcggcaacac cctcgcctgc ctcaagccga tcgaggacgt caaaggttcg gtcaagatca
     1321 gcccgcttcc gcacatgccg gtggtcaagg acctggtgcc agacctgtcc caggcctacg
     1381 cgcaatacaa ctcgatcaag ccctggatgc aggcggactc gcccgccccg ccggacggcg
     1441 agcggttgca aagcaaggag gagcgcgcga agctcgacgg catgtgggag tgtatcctgt
     1501 gcttctgctg ctccacctcc tgccccagct actggtggaa cggcgaccgc tacctgggtc
     1561 cggccgtgct gttggccgcc tatcgctgga tcgccgacac ccgtgatgag gcaaccggcc
     1621 agcgcctgga cgaactggaa gaccccttca agctctaccg ctgccacacc atcatgaact
     1681 gcaccgatac ctgcccaaaa ggcctcaacc cggccaaggc gatcggcgcc atcaagcagt
     1741 tgatcgtcga gcggcaaggg taatcccgcc ggcttttgac cgcggccccg caaagcgcga
     1801 tggtaacgac caaccgcgtc aataagggga gaccacgatg atcgaagtct ggacatggcc
     1861 gacgccgaac ggccataaaa ttcatatcgc cctggaggaa ctcgaacttc cctataaggt
     1921 cgtcccgatc aacatcggca aaggcgacca gttcaggccg gaattcctgg cgatcacccc
     1981 caaccaccgc atcccggcga tcgtcgatcc cgatggcccc ggcggcaagc cgctgaaact
     2041 cttcgagtcc gcggcgatca tgatctacct gtcggaaaag accggcggca agctgatgcc
     2101 cgccgatccc gtcggccgct acatctgcct gcaatggatg atgttccaga tgggcggtac
     2161 cggcccgatg ttcggccagt acaaccactt cgcaaactac gcggtggaaa agattcccta
     2221 cgccatcgaa cgctacacca acgaagtgaa gcgcctgcac cgcgtcctgg acaagcgcct
     2281 ggcggaaact gaatatctcg ccggtgccgc gtactccatg gccgacatca tcaacttccc
     2341 ctggatccgg aatccggagc gtcggaacat cgatctggcc gaatatccca acgtcaaacg
     2401 ttggcacgac gccgtcgccg cccgccccgc cgttcagcgc ggcgtggaag tcctgtccga
     2461 gaaccagcgc cgcggccaga tgaccgacgc ggagcgtgag gtcatgttcg gcaagaccca
     2521 gttccaggca cgctgaaacg ccaccggacg tcacggcgac aaccacgtcg ccgtgacggt
     2581 tcctggccgg ccgtttcgct cgcgaagcac aacttaaaca gcaacgatcg agccgacttg
     2641 gctacaaccg cccgttgatg aagatatcgt caataatttt ttaccatttc ctatattttg
     2701 acaatcacgt gactttgttg cagaaattag agatgattaa cgaagttggg gaacgattga
     2761 aaatgccgcc tcgttatcgt ttgcattgga accactatcg gggattcctt tgatctgtgc
     2821 ggcaggtcgg ttataagctg taaccaacgt gaccaattcg ttgacgacat aaaaccagag
     2881 gctagttcag gcaccggatg accgcgcgca ttctgatcgt ggatgatatg cctgcgaaca
     2941 cgcgcttgct cgaagcaaag ctcgctgcgg aatattatca agtcagctcc gcccgcgacg
     3001 ggtttgaggc actgggcatc gcccgcgact ggcagccgga cctgatcctg ctggatgtca
     3061 tgatgcccgg catggacggc tatgaatgct gccgtcaact gaaggacgac gccgtcacat
     3121 tgcacatccc ggtcgttatg gtgaccgccc ttggcgagtc cggggaacgg ctgcgcggcc
     3181 tggacgccgg cgccgacgat ttcctgacca agccggtcga ctacgacacg ctgatggcgc
     3241 gggtacgcag cctggtgcgc ctgaagcgcc tcctcgacga atggcgggcc cgaggcgata
     3301 ccgcgcgggc cctcggcctc agcacggaca gggtgctgat cccctccatc gccggcgcgc
     3361 gcgccctcgt catcgacgat tgggaccaaa gtgcgcagaa catccaggat gccctggccg
     3421 gagacggggt catctccgcc cacgcccggg actgtgccga ggcgacccgg atgaccgctg
     3481 cggtcaattt cgaccttctt gtggtcaacc tgtcacttgc cgacgaagac ccgctgaaac
     3541 tggtgtccat cctgcgggcc tccgacgtga cccatgaaac ccccctgctg ctggtcggtg
     3601 agccgggcga gaaagaccgg atcctgcgcg gcttcgaact cggcgccaac gactggctcg
     3661 tgcagcccat cgatgcgcag gaactccgcg ctcgggcacg caaccaggtg cgccggaagt
     3721 tctaccagga ccggctgcga tccgacctgg gcacggcgct ggaaatggcc ctgaccgacc
     3781 cgctgaccgg cctgtacaat cagcgctatc tgcaccgtca cctcagcagt ctgatggaca
     3841 gcggtcaggg acggcaactc gccgtcctga tggtggacgt tgatcacttc aaatcggtga
     3901 acgaccgcta cggccacgcc tccggcgacc gggcgctgcg gctgatcgcc gactcgctgc
     3961 ggatcaacac cagggtgttc gattccgtgg cacgctacgg cggggaggag ttcgtcgtcg
     4021 tcatgccaag cacggggccg gccgaagccg ccgctgccgc ggaacgtcta aggctggcaa
     4081 tccaggaaat cgagtttcat gccgccgcca atctgcacat gacattgacc gtcagcgtcg
     4141 gcgtggcatg cacgtcggct gtcaccgctt tgccggaggt gttgctccag gccgccgatg
     4201 ccgcgctcta cgatgcgaag cggaatgggc ggaaccgagt cgaaatggcg cgaaccgcgg
     4261 aagctatttg attttcgctt ccttgaacgg gacatgcttc cgcacgaccg gatcgtactt
     4321 gttcagttcc agcttggtcg tctgcgcacg cgcattcttt ttcgtcacat aaaagaagcc
     4381 ggtgtccgcg gtggatacca gtttgatctg aacggtgttc gacttggcca tcagcctgat
     4441 ccttgaaagg gcacccgttc atatgggtgc cgatgagggg cgggaaaatg cgcaacaagc
     4501 ctcccgcggt caagtaatta aggcgggggg cagcgccctg gcatcaaacc acccgatgca
     4561 acagcggcgc cgagcctatc aggaatcttg tgtgaggggt catagtcagc ccggtgacgg
     4621 gcttggagag acccatgacc atacggaacg aactgattga tgaattgctt g
//
LOCUS       DATAVD010001494         2013 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2003320, whole genome shotgun sequence.
ACCESSION   DATAVD010001494 DATAVD010000000
VERSION     DATAVD010001494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2003320"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(182..1327)
                     /locus_tag="VHX39_28710"
     CDS             complement(182..1327)
                     /locus_tag="VHX39_28710"
                     /inference="COORDINATES: protein motif:HMM:NF004811.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA acetyltransferase"
                     /protein_id="HEX3995175.1"
                     /translation="MQRGSAAIIGAAESDIGAVAALMSPIDLMAQGIQRALDDAGLSL
                     ADVDGVFSATSQARTSVMSLVEYLGLPDAFTDSTIVGGSSFEIHVAHAQAALEAGLCS
                     VAVIAYGSTQRTVGRRGASPREYNPYETPFRPFLPATAYAMAANRHMFEFGTTREQLA
                     EVAVAAREWALLNPAAWEKKPLSIADVLNARPISDPLTVRDCCLITDGGGAIVMTTAE
                     RARAMGAKAAYVLGCGQSITHATISSMPDLTHTGAIQSGALAYRAAGMKAADIDVLAL
                     YDAFTINTILFLEDLGFCPKGEGGRFVSGGHIGPKGGLAVNTNGGGLSYCHPGMYGLF
                     LLIEAVRQVRGECGARQVPKADTAIVHGNGGVLSAQATVILGNASTL"
     gene            complement(1327..1704)
                     /locus_tag="VHX39_28715"
     CDS             complement(1327..1704)
                     /locus_tag="VHX39_28715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HEX3995176.1"
                     /translation="MPTDSPLTTYIAHLERGELAYQFSPSLGGAVFYPRVIAPKTGKA
                     DLEWRVSKGLGSVHATTVVHPQKGEPYNVALIDIDEGFRMMSRVEDIAPTQVRIGMRV
                     QFRTHKAEGDEPPYPVFTPVEAA"
     gene            complement(1751..>2013)
                     /locus_tag="VHX39_28720"
     CDS             complement(1751..>2013)
                     /locus_tag="VHX39_28720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995177.1"
                     /translation="GGQALTVGVSRFDIVTLDALQREFGDLAPDPAGRESFMAALVFR
                     TRSLDAAARAMREGDIAGVRQDNDLVTVPATSACGATLAFCL"
BASE COUNT          413 a          657 c          581 g          362 t
ORIGIN      
        1 tgacttttcc ggtaatcgcg attttgccat cgaccgccgg cacctgaccc gagacgacga
       61 ccaaattccc ggtcaccaca taaggcacgt aatttgcaat cggcggcatc ggagttggca
      121 ggccaatgcc cagttccgcg agtttcattt cgacacgacc gggcatcgga aaggctcctg
      181 attacaaagt tgacgcgtta cccagaatga ccgtcgcctg agcggacaga acgccaccgt
      241 tgccatgcac gatcgctgtg tcggctttcg gaacctgccg tgcaccgcat tcgccacgca
      301 cctggcgcac ggcttcgatc agcaggaaca gcccgtacat gccgggatgg caataggaca
      361 gtccaccacc attggtgttg accgcaaggc cgcctttcgg cccgatatga ccgccggata
      421 cgaaccggcc accctcacct ttcgggcaaa agccgagatc ttcgagaaac aggatcgtat
      481 tgatcgtgaa cgcgtcatac agcgccagca cgtcgatatc ggcggccttc atgcccgctg
      541 cccgatacgc caaagcgccg gactggatcg cgccagtatg ggtcagatcc ggcatcgagg
      601 aaatcgttgc atgcgtgatc gactgcccgc agcccagtac gtaagcggcc ttggcgccca
      661 tcgcgcgagc tcgttccgca gtcgtcataa cgatcgcacc accgccgtcg gtgatcaggc
      721 agcaatcccg caccgtcagc ggatcgctga tcggcctggc gttcaggaca tcggcgattg
      781 agagcggttt cttctcccag gccgcgggat tcaacaacgc ccattcccgt gccgccaccg
      841 cgacctcggc gagttgttcc cgtgtcgtgc cgaattcaaa catgtgccgg ttcgccgcca
      901 tggcgtacgc agtcgccggc aggaacggcc tgaacggagt ttcataaggg ttatattccc
      961 gagggctggc gccgcgccgt cccactgtcc gctgcgtgct gccataagcg atcaccgcca
     1021 cggaacacag gcctgcttcc aatgcggcct gagcgtgcgc cacgtggatc tcgaacgatg
     1081 acccgccgac gatggtagaa tcggtaaacg catccggcag gccaagatat tccaccagcg
     1141 acataaccga tgtgcgcgcc tgcgacgtcg cggaaaacac gccatccaca tccgcaaggc
     1201 tcaacccagc atcgtccagc gcgcgttgta tcccttgcgc catcagatca atcggtgaca
     1261 tcaaggcggc aacggcaccg atatcggatt cggcggcacc gatgattgcg gcggaacctc
     1321 gttgcattac gctgcctcca ccggagtgaa gaccggatag ggtggttcgt cgccctcggc
     1381 cttatgcgtg cggaactgca cgcgcatgcc gatacggacc tgggttgggg cgatatcctc
     1441 gacccggctc atcatgcgaa acccctcgtc gatgtcgatc agtgcgacat tgtacggctc
     1501 gcctttttgc ggatgcacga cggtcgttgc atgtaccgag ccgagaccct tactaacccg
     1561 ccactccaga tcggccttgc cggtcttcgg cgcgatcacc cgaggataga acaccgcacc
     1621 acccagggac gggctgaact gataggcaag ttcgccgcgt tccagatgcg cgatgtaggt
     1681 tgtcaaaggc gagtcggtcg gcatggtacg ggcgtctcct ggtcggacgg tcaggctacc
     1741 gcgtgacggt tcaaagacaa aatgccaatg ttgcgccgca cgcagaggta gccgggacgg
     1801 tcaccaaatc attgtcctgg cgcaccccgg cgatgtcacc ctcccgcatc gcgcgggccg
     1861 cagcgtcgag cgaccgtgta cgaaacacca gtgctgccat gaagctttcc ctcccggcag
     1921 ggtccggcgc cagatcgccg aactcgcgct gcaatgcatc gagagtaacg atgtcgaagc
     1981 gggatacgcc cacggtcaaa gcctgaccac cgg
//
LOCUS       DATAVD010001495         6685 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_327279, whole genome shotgun sequence.
ACCESSION   DATAVD010001495 DATAVD010000000
VERSION     DATAVD010001495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6685
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_327279"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(187..1191)
                     /locus_tag="VHX39_28725"
     CDS             complement(187..1191)
                     /locus_tag="VHX39_28725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HEX3995178.1"
                     /translation="MSQSQSQSQGPETGGPLLLSRYAECLFWLARYMERVENLARILE
                     VTDTFVRHGADQSGWLSIVQINADEKRFYEKHDTVTAESVLRFYLAERDNPSSISACL
                     FAARENARTLRPLISTEMWSQINVFYNRARELMAGEARPSDVSQICAFLKEGCQFHTG
                     ITEGTLFRDQGWAFYSIGKYLERGDQSSRLVDIKYHTLLPSVTDVGGAEDVNQWHALL
                     RAAAGYHAFRRVHPSGMTPASVAGFLLLNDSCPRSIVQSVHQIETYLRQLGSDYGLKG
                     ANQVLEQLGELRAGVMDQKIEHILQRGLHEFLDWVQLQFLGIAAAVADGFWHTKEDAT
                     "
     gene            complement(1188..2654)
                     /locus_tag="VHX39_28730"
     CDS             complement(1188..2654)
                     /locus_tag="VHX39_28730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006117518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HEX3995179.1"
                     /translation="MTAPSTAASGPSLGLLDAYDSTEFYCEMLDGAARDPRIAQVLER
                     LRQVSPDDLRRRAEIAESELYNLGITFTVYSDRDAIDRILPFDLVPRILTAAEWDHID
                     RGVRQRVAALNAFLWDIYHDRAILRDKVVPESLVLGNSNYRPEMIGLDVPHRTYVHVC
                     GIDLVRDETGKFLVLEDNARTPSGVSYVVENRHMMARMFPDLFDGIAVRPVGDYGMRL
                     HTALTEIAPSGDAEPRVVLLSPGIYNSAYFEHIFLAREMGVPLVEGRDLIVEDGRVWM
                     RTTAGLAPVHAIYRRLNDDFLDPDVFDPDSVLGVRGLIDVWRNGKVALANAVGTGVAD
                     DKAIYAYMPRIIRYYLAEDAILSNVQTNICAEAEGLAYTIDHLHELVVKPVGESGGYG
                     IIIGPRATAQECSDFRAKLLADPSNFISQPMVKLSVSPTLMGSRLAPRHVDLRPFAVT
                     GQSTWVLPGGLTRVALREGSLVVNSSQGGGSKDTWVLE"
     gene            complement(3180..3845)
                     /locus_tag="VHX39_28735"
     CDS             complement(3180..3845)
                     /locus_tag="VHX39_28735"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX3995180.1"
                     /translation="MGQTIQLKSSDGFTLDAYVAGPANATKGLVVIQEIFGVNHHMRD
                     MADRFGAAGYAVVAPAVYDRVQKGFEAGYTSEDIATGRDVRMKLDDKQLMLDVEAAAA
                     HLAGKKIGIVGYCFGGTVSWWGATRSKSFAGASCWYGGGIAGTKDERPNCPVQMHFGE
                     TDTSIPMTDVDAIRAAQPKVDSFVYEGAGHGFGCDERGSYSKPDYELAQSRTLEFFAK
                     NLA"
     gene            4051..5610
                     /locus_tag="VHX39_28740"
     CDS             4051..5610
                     /locus_tag="VHX39_28740"
                     /inference="COORDINATES: protein motif:HMM:NF023222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3995181.1"
                     /translation="MTAASGSTIPYTGQEFLDSLDDGREVWIYGERVGKITDHPAFRN
                     TARMIARLYDALHADHAEGKHILSCPTEWGGFTHRYFIAPRTIEEQVASRDAIAAWAR
                     LSYGWFGRSPDYKAAFLATLGANAEFYAPWQENARRWYRQSQERVPFINHAIIHPPVD
                     RSMAPGAPGGPTDVYMHITKETDAGIRVSGAKVVATGSALTHFTFVAHHGLIPVQDKN
                     FAVVFMVPTNAPGIKLICRTSNEYRAAALGSPFDYPLSSRLDENDAIFVMDDVLVPWE
                     NVFVHADVDTANNFFPRTGFLPRALLHGCTRLAVKLDFIAGLLLKATEMTGTRGFRSV
                     EANLGEVIAWRNMIWGLSDAMAKTATPWTGGHILPGSDPGAAYQVLAPEAYVQIKALV
                     EKTVASGLIYMNSHASDFAAPELRKYLDLYLRGSGGASAEERVKLMKLLWDAVGSEFG
                     GRHELYEINYSGSHEEIRRYALFGALASGNADRWKSFAESCLAEYNLDGWLAPDLVNA
                     DDVSILKRDRR"
     gene            5715..6581
                     /locus_tag="VHX39_28745"
     CDS             5715..6581
                     /locus_tag="VHX39_28745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995182.1"
                     /translation="MPDPKSQEGTMFGFPAESVHAWSSALFIVAVVCAAALSFLISQS
                     SSLVLAEKQRALDTQRSEADVMVTAARKDADAARAVAAQAREHGTALAVRAAGLEKDV
                     ADARERIAALQQETAASKATAEQAVTARTQVQANLEHEKTARAEFESQFSWRILSDDQ
                     RNTLVNALSGTPHTVAIEFPGGDQEAQFFSLQLTKVFQAAGWKVVLRSNSSAPLLFGL
                     NVPGPVNDTVSLVRRVLADIDMRPGELDAPTTGLVAQSGETAKLTPDCRIMVGAKLTE
                     IVRDVMAAVQSK"
BASE COUNT         1346 a         2068 c         2022 g         1249 t
ORIGIN      
        1 catcgacgaa cgactggttg cttctgttgt tcccctgaaa aaagtcattc cgttaccggc
       61 cagatgcagc ttttcgtcgc cgagattata gacatccgca tcgggtcgag agcagctgtc
      121 caaggcggtg catgatcgcg acgcaccgac ggtctcccaa cccgacaaaa tcactgtgtc
      181 gaggtactac gtcgcgtctt ccttggtgtg ccagaaccca tccgccaccg ccgcagcgat
      241 gccgaggaat tgcagctgca cccaatcgag aaactcgtgc agcccgcgct gcaggatgtg
      301 ctcgatcttc tgatccatca ccccggcgcg cagttcgccg agttgttcca gcacctggtt
      361 cgcccccttc aggccatagt cggacccgag ctgccgcaga tatgtctcga tctgatgcac
      421 gctctgcacg atcgaccggg gacaggaatc gttcaataac agaaatccgg cgaccgaagc
      481 cggcgtcatg ccgctgggat gcacccgccg gaatgcatga tatccggcag cagcacgcag
      541 caacgcatgc cactgattga catcctcggc gccgccgaca tcggtcaccg agggcaacaa
      601 ggtatgatat ttgatatcga ccagccgcga tgattgatcg ccgcgctcga ggtatttgcc
      661 gatagagtaa aaagcccagc cttggtcgcg gaaaagggtt ccttcggtga tgccggtgtg
      721 gaactggcag ccttctttca gaaaggcaca gatttgcgat acatcggacg gtctcgcctc
      781 accggccatc agctcgcggg cgcggttgta aaacacgttg atctgcgacc acatttccgt
      841 ggagatcaac gggcggaggg tgcgggcgtt ttcgcgtgcc gcgaacaggc aggccgaaat
      901 cgaactcggg ttgtcgcgtt ccgccaaata gaaccgcaat acggattccg ccgtcaccgt
      961 gtcgtgtttt tcgtagaacc gcttttcatc ggcattgatc tgcacgatcg acaaccagcc
     1021 cgactggtcc gcaccatgcc gcacgaaggt atcggtgacc tcgaggatcc gtgccaggtt
     1081 ctccacccgc tccatatagc gggcgagcca gaacaggcat tcggcgtaac gcgacagcag
     1141 cagcgggccg ccggtctccg gcccctgcga ttgcgattgg gactggctca ttccagcacc
     1201 caggtgtctt tcgagccacc gccttgtgac gaattgacca ccagcgagcc ctcgcgcaac
     1261 gccacccgcg tcaggccccc gggcaaaacc caggtcgatt gaccggtgac cgcgaacggc
     1321 cgcagatcga cgtgccgcgg tgccagccgg ctgcccatca aggtcggcga taccgacaac
     1381 ttcaccatcg gctggctgat gaaattgctc gggtcggcca gcagttttgc acggaaatcg
     1441 ctgcactcct gcgcggtggc gcgtggcccg atgatgatgc cgtagccacc cgattcaccg
     1501 accggcttca ccaccagttc gtgcaaatga tcgatggtgt aagccagccc ctccgcttcg
     1561 gcacaaatat tggtttgcac gttcgaaagg atcgcatcct ccgccagata gtaacggatg
     1621 atacgaggca tataggcata gatcgccttg tcatcggcaa cgccggttcc aaccgcattg
     1681 gccagcgcaa ctttgccgtt acgccacaca tcgatcaaac cccgtacgcc gagcacgctg
     1741 tcgggatcga acacatcggg atcgagaaag tcgtcgttca gccggcgata gatcgcatgc
     1801 accggagcca gaccggcggt ggtgcgcatc cagacccggc cgtcctcgac gatcagatcc
     1861 ctgccctcga ccaacggtac gcccatctcg cgggccagaa aaatgtgctc gaaataggcc
     1921 gagttgtaga tgcccggcga caacagcacg acgcgaggtt cagcgtcgcc cgagggtgcg
     1981 atttcggtca atgccgtgtg cagccgcatc ccgtaatcgc cgacgggccg gaccgcgatc
     2041 ccatcgaaca gatcgggaaa catgcgcgcc atcatgtggc ggttctcgac gacgtaggac
     2101 acgccggatg gcgtgcgcgc gttgtcttcc aacacaagga atttaccggt ttcgtcccgc
     2161 accagatcga tgccgcaaac atggacgtac gtccggtgcg gcacgtcgag gccgatcatt
     2221 tcgggccggt aattggagtt gcccagtacc agcgattccg gcaccacctt gtcccgcaaa
     2281 atcgcgcggt cgtgataaat atcccagaga aacgcgttca acgcagcgac ccgctggcgc
     2341 acgccgcgat cgatatggtc ccactccgct gccgtcagga tccgcggcac caggtcgaac
     2401 ggcaggatac ggtcgatggc atcgcggtcc gagtaaaccg tgaaggtgat gccaaggttg
     2461 tatagttccg actcggcgat ttcggcgcgc cgccgcaaat cgtctggtga gacctgacgc
     2521 agccgctcca gcacctgggc tatcctgggg tcgcgtgccg cgccgtcgag catctcgcag
     2581 taaaattcgg tcgagtcgta ggcatcgagc aaacccaaag acgggccaga tgccgcagtg
     2641 gagggcgctg tcatggcatg ggctgcttcc cggggttgaa cagaaccagt gtaacactct
     2701 gcgggaacca aaccatgcaa gaggcaggcc atgaagcata attcatcgtg accggccgca
     2761 tgatgcgggt gggccaacat catgtgggag ggccatgatg gccgatggtc aaaccctcgg
     2821 tgcccgctgt acaggctttg cgcctttttg cggttctttg cgtgttttgc gttatccttt
     2881 cgctttgccg gttcggtgct gtccgtcagg attagcgccg cttcaggcca aggcaaatcg
     2941 caaaacacgc aaagaaccgc aaaatggcgc aaaggggacc gtgcgatagc ggcggccttc
     3001 gcgaaccggg ttcaacgccg cgaaagtttc gatccctgcg ggcagtctcg atttgcgtcg
     3061 attgccgaca cgcacccgcc tgttgttacg gcacctgccg caatcctggg ccggcagcga
     3121 ccgtgtggcc accaaacgca cggccccgcc cgtccccgag cggggctgtg gcggtccgat
     3181 caggccaggt ttttggcgaa gaattccagc gtgcggcttt gtgccaactc gtagtccggc
     3241 ttgctgtagc tgccgcgttc atcgcaacca aacccgtgac cggcgccctc gtagacaaag
     3301 ctgtcgacct tcggctgcgc ggcgcggatc gcgtccacgt cggtcatcgg gatcgaggtg
     3361 tccgtctcac cgaaatgcat ctgcaccggg cagttcggtc gttcgtcctt ggtcccggcg
     3421 atgccgccgc cataccagca ggaggccccg gcaaagctct tgctgcgggt ggcaccccac
     3481 caggaaaccg tgccgccaaa gcaataaccg acgatgccga tcttcttgcc ggcgagatga
     3541 gcggccgctg cctcgacatc cagcatcaac tgcttgtcgt cgagtttcat gcgcacatcg
     3601 cgccccgtgg cgatgtcttc cgacgtatag ccggcctcaa accccttctg gacccggtcg
     3661 tacaccgcag gcgcgacgac cgcatagccc gccgcaccga aacggtcggc catgtcgcgc
     3721 atgtggtgat tgacgccaaa gatttcctga atgacgacga ggcccttggt cgcgttcgcc
     3781 gggccggcga cataggcgtc caatgtgaac ccgtcgctcg atttgagctg aatggtctgt
     3841 cccatacgat tctcccttct ggtggctggt ctgcgtcatg cgcggcgcca acatggcgat
     3901 accggacgcg aggtcaacct cggtccgatg aacttatgcc cagtaccgct cgcccagtgg
     3961 tccgcagttg cgaaagactg atgcctcagt cagggtcggg gcaataaagc tggccaacca
     4021 ggccaaaaac aaatggggag agcaatcgta atgaccgcag catccggttc aaccatcccg
     4081 tacaccggtc aggaattcct cgacagcctc gacgacgggc gggaggtttg gatctacggc
     4141 gaacgggtgg gaaaaatcac cgaccatccc gcgttccgca acacggcgcg catgatcgcc
     4201 cggctgtatg acgcgctgca tgccgaccac gccgagggca aacacattct gagttgcccc
     4261 accgaatggg gcggcttcac ccatcgctat ttcatcgctc ctcgcaccat cgaggaacag
     4321 gtcgcctcac gtgacgccat cgccgcctgg gcgcgcctga gctacggctg gtttggccgc
     4381 tcgcctgact acaaagcggc atttttggca acccttggcg ccaacgccga attttatgca
     4441 ccgtggcagg agaacgcccg ccgttggtac cggcaaagcc aggaacgcgt gccgttcatc
     4501 aatcatgcga tcatccatcc gccggtcgat cgctcgatgg caccgggcgc gcctggcggc
     4561 ccgaccgatg tctacatgca catcaccaag gagaccgatg ccggcataag ggtcagcggc
     4621 gccaaggtcg ttgccaccgg ctcggcgctg acccatttca cctttgtcgc gcatcacggc
     4681 ctgatcccgg tgcaggataa gaattttgcc gtggtcttca tggtgccgac caatgcgccc
     4741 ggcatcaaac tgatctgccg cacatcgaac gagtatcgtg ccgcggcttt gggctcaccg
     4801 ttcgattatc cgttgtccag ccggctcgat gagaacgacg ccatcttcgt gatggatgac
     4861 gtgctggtgc cgtgggaaaa cgtcttcgtc catgccgacg tcgacacggc caacaatttc
     4921 ttcccgcgca ccgggttctt gccgcgcgcg ttgctgcacg gctgcacccg gctggcggtc
     4981 aaactcgatt tcattgcggg attgttactc aaggcgaccg aaatgaccgg cacgcgcggc
     5041 ttccgcagtg tcgaggccaa cctcggcgag gtgatcgcct ggcgcaacat gatctggggt
     5101 ctgtccgatg cgatggcgaa aaccgccacg ccgtggaccg gcggccatat tctgcctggc
     5161 agcgatccgg gtgcggccta tcaggtgctg gcgccggagg cctatgtgca aatcaaggcc
     5221 ctggttgaga aaaccgtggc cagcggcctg atctacatga attcgcacgc gtccgatttt
     5281 gccgcaccgg agttgcgcaa atacctcgac ctgtatttgc gcggatccgg tggcgcatcg
     5341 gccgaggagc gggtcaaatt gatgaagctg ctgtgggatg ccgtcggctc ggagttcggc
     5401 ggccggcatg agctgtacga aatcaactac agcggcagcc atgaggaaat ccggcgttat
     5461 gcgctgtttg gcgcgctggc ctcgggcaac gcggatcgct ggaaaagctt tgcggaaagt
     5521 tgcctggcag aatacaacct ggacgggtgg ttggcgcccg atctggtgaa tgccgacgat
     5581 gtcagcatcc tgaaacgtga ccggcgctaa tttgcgctga aggccgggac caggcggcgg
     5641 ggcctcgccg cactgtcctg tccctcggtg gtccaatgat gtgcgtggct gccgcagacc
     5701 caaggaccag gaaaatgcct gacccaaaga gccaagaggg caccatgttt ggttttccgg
     5761 ccgaaagcgt tcacgcgtgg tcgagcgccc tgttcatcgt ggccgtcgtg tgcgccgctg
     5821 ccctgagctt cctgatatcg cagtcctcgt ccctggtgct ggcggaaaaa cagcgggcgc
     5881 tggacacgca aaggtcagag gctgacgtca tggtgacggc ggcgcgtaaa gacgccgacg
     5941 ccgcccgagc ggtcgctgcc caggcgcggg aacatggcac ggctctggca gtcagggcgg
     6001 caggcctgga gaaggacgtc gccgacgcac gggagcgaat tgccgctctg caacaagaga
     6061 ctgcggcatc caaggcaacc gcggaacagg cggtgactgc cagaacacaa gtccaggcca
     6121 atctggaaca tgagaaaacc gccagagccg agttcgagtc gcaattctca tggcgcattc
     6181 tcagcgacga tcaacggaac acgctggtca atgcgctttc gggaacgcct cacacggtgg
     6241 cgatcgagtt ccccggcggc gatcaggagg cgcaattttt cagcctgcaa ctgaccaagg
     6301 tgttccaggc ggccggctgg aaagtggtgc tgcgatcaaa ttcgtcggcg ccgttgctgt
     6361 tcggtttgaa tgtgccaggc ccggtgaacg atacggtcag tctggtccgc cgtgttctcg
     6421 cggatatcga tatgaggcca ggcgaactcg acgcccccac cactgggttg gtcgcgcaaa
     6481 gtggggagac ggcgaagttg acacccgact gccggatcat ggtgggagcg aaactgaccg
     6541 aaatcgtcag ggatgttatg gcggctgtgc agagcaagtg atcgtcggaa gcaattttgc
     6601 catgataacg ccgcgacagc gtctgccagc gcgatggcag attgttgcgg aggcatgcca
     6661 ggcggacggt tgaaaccatt aaaat
//
LOCUS       DATAVD010001496         6560 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1816559, whole genome shotgun sequence.
ACCESSION   DATAVD010001496 DATAVD010000000
VERSION     DATAVD010001496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6560
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1816559"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..424)
                     /locus_tag="VHX39_28750"
     CDS             complement(<1..424)
                     /locus_tag="VHX39_28750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995183.1"
                     /translation="MHRECEFIGPLLTPAFALHALPALLSRLGLYPADPTYAWRLIRR
                     GLHEFAATGGPVRVLNHVVKPLAAGLGYCEIRREDPVATREGPEDGGYSLRTSTGSLL
                     RVWPFGSDTGLDTPLKRGTATRISPLRHAARVLRACGEC"
     gene            complement(414..3464)
                     /locus_tag="VHX39_28755"
     CDS             complement(414..3464)
                     /locus_tag="VHX39_28755"
                     /inference="COORDINATES: protein motif:HMM:NF012403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HEX3995184.1"
                     /translation="MELQPGSRVRARGLVWDVLAVERSADRECLDLRCVDGDMAGLEW
                     QIYVPPDQVERVDQAFDPECPAPLSLWHLMHRAHVLNALPDATSFVVRDPGRIRVEPY
                     QLVPLMRALDMPRPRLLLADGVGLGKTIQAGLIAAEFIARRRAHRILIVAPSGPLLWQ
                     WEQETRLRFGLKFTLITNAAELWDIRCAHELGANPFDTISLCITALDFAKQDHVLEEL
                     ERSAWDLVIIDEAHHCIGYSQMSQENTYRRRLAEVLARRSDGMLLVTATPHDGHDAHF
                     ASLIALLDPSLVDGAGGFVGRDYRRHVIRRLKAHIRDPHTGAPLFRRRHVIHVKVDVH
                     GNEHETVREFHRVLAAFVVPRLRRRTGNDDALAFVSLLKRSVSTISACLETLRVVTER
                     LARQRAGEVETKAARQERARALRAWRRRAARFGTLDAADEANQQALEVESMAEALRLE
                     PDAEPAHLIRLGIAAEAHDPKLSAILLEVRMIRLRHRRANILIYTEYTDSQVAAARAL
                     RAARGIEGEVLSIGGQDDDRSRAAAAQRFGECDGLILISTDSLAEGLNLHRHCFHLIH
                     LDLPYNPNRLEQRNGRIDRYGQQCEPEIRYLYIPGTFEENLLLHLIAKYEKARSSLDV
                     MPDTLGVTAGADDYQGPLTGGLSEDPSDLFQPDEEVIRTLDRAVSDVNPQTVADLMRE
                     IDRAFAAFDLMAVHHGWYGARGYDAGMDQINCVEQARHNTDGVGDLSDFIAAVIEAET
                     HQPAISPHQMRLPADWTRGLEGMPGFDPAASILHFTSDLENWRDTSGRDIGFFGRAHP
                     LVLRAIRHGCRLPGVTAVSQGEHLGLLLTFQLEIAAARRVVFREMVAVLASPDRPPEE
                     CRDWLALGTQGHFFPSDGVWHRLFSPWADVARSAAEHVVAQIASRRYATFVAEYEATS
                     QQETVRSRHWLRVKADQLCGTFIAPTRDLFGAAASGPIWQHQEDPVTRLVSFATNRDV
                     TGSKRREANDALDTFRAMQAASGKPSTVVSRAIGMLMLVPADAP"
     gene            complement(3594..4256)
                     /locus_tag="VHX39_28760"
     CDS             complement(3594..4256)
                     /locus_tag="VHX39_28760"
                     /inference="COORDINATES: protein motif:HMM:NF015896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook capping FlgD N-terminal
                     domain-containing protein"
                     /protein_id="HEX3995185.1"
                     /translation="MTPVTTTPAAAASAAASTAANPLVSLTSNFGDFLNLLMTQLQNQ
                     DPTSPMDANSFTNELVEFSSVEQQINTNTSLTTLIQLTQAADVTQASAVVGKQVMVQS
                     TQVPLQDGSGTVVFTANTAGPATVTVQNANGGTLQQVTVNAAQGANSWTWNGTNSSGQ
                     TLPDGAYTVTVTNAAPGAGGAALPFTVVGTATGVTTANNTVNLELGALSVPFSNVVSV
                     GS"
     gene            complement(4272..4787)
                     /locus_tag="VHX39_28765"
     CDS             complement(4272..4787)
                     /locus_tag="VHX39_28765"
                     /inference="COORDINATES: protein motif:HMM:NF014207.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HEX3995186.1"
                     /translation="MTVASPPSPVDKVHPATPADQIAPALVGILQKNDGQQSVTIRLQ
                     PAELGQVQIRIDQTNAGAAHINIIAERPETLQLLQRDEPRLQQTLDQAGVLSSGRTVS
                     FQVATPEQVGASASRPDSMETGSGTSGQGQSGGAWRQSGDSPNDFGRGSGTDQGQTRT
                     RWFRAGLDITA"
     gene            complement(6108..>6560)
                     /locus_tag="VHX39_28770"
     CDS             complement(6108..>6560)
                     /locus_tag="VHX39_28770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995187.1"
                     /translation="NLIRAGQMLAVYQLAGSISRPIWGWIADRYLTPMQTLGVHGIGM
                     TVAAALAAQFSPGWAAGGVLVVVLLAGCSAGGYTGVAYAEYAALGGTRRTEATGLGTA
                     LMFSGGLLLPPLFGISVTFLGGYLVAYRAFAALALGSAILMWWPPVPR"
BASE COUNT         1329 a         2060 c         1915 g         1256 t
ORIGIN      
        1 tgcattctcc gcaggcccgc agcacccgag cggcgtgacg taacggactg atgcgggtcg
       61 cagttccgcg tttgagcggt gtgtcgagac cggtgtccga tccgaacggc catacccgca
      121 gcagggaacc agttgatgta cgcagcgaat agccaccgtc ttcggggcct tcacgcgtcg
      181 cgacggggtc ctcgcggcga atttcgcagt accccaaacc agcggccaac ggtttgacga
      241 cgtggttgag cactcgtaca gggccacccg tcgcagcgaa ctcgtgtaat ccccggcgta
      301 tcagccgcca tgcatatgtc gggtctgccg gataaagacc gagtcgcgac aacaatgccg
      361 gcaacgcgtg caacgcgaac gccggggtca gcaatgggcc gatgaattcg cattcacggt
      421 gcatccgcag gcaccagcat cagcattccg atcgctcgcg acacgaccgt actgggcttt
      481 ccgctggcag cttgcatggc ccgaaatgtg tcaagcgcgt cgttggcttc acgacgtttc
      541 gatccggtca catcccgatt ggtcgcgaac gacaccaacc tggtcactgg atcctcctga
      601 tgttgccaga tcgggccgga cgccgccgcc ccaaacagat cgcgcgttgg ggcaataaac
      661 gtcccgcaca gctggtcggc tttgacccgc aaccaatgcc gcgaccgtac ggtctcttgc
      721 tggctggtcg cttcatattc agcgacgaat gtcgcgtagc ggcgagacgc gatctgggct
      781 accacatgct cggctgcgga acgggcaacg tcggcccatg gtgaaaataa ccgatgccaa
      841 actccgtcgg acgggaaaaa gtgaccttga gtaccaagcg ccaaccaatc ccggcattct
      901 tccggtggac gatctgggct ggcaagcacg gcaaccatct cacggaacac aactcggcgt
      961 gccgcagcga tttccaattg aaacgttagc aacaaaccga ggtgctcgcc ctgactgacg
     1021 gcggtcacac ctggcaatcg gcagccgtga cggattgcac ggaggaccaa cggatgcgcg
     1081 cggccaaaga acccgatgtc gcgcccagag gtgtcgcgcc agttttcgag atcactggtg
     1141 aagtgcagga tactcgctgc cggatcgaac cctggcattc cctcaagccc gcgagtccag
     1201 tcggccggca atcgcatctg atgcggactg atcgctggct gatgggtttc ggcttcaatc
     1261 actgcggcga tgaaatccga aagatccccg acaccgtccg tgttgtggcg cgcttgctcg
     1321 acgcaattaa tctgatccat gccggcgtcg taaccccttg caccgtacca accatgatgc
     1381 accgccatca aatcaaacgc ggcaaatgcg cggtcgattt cccgcatcag atcagcgacc
     1441 gtctgcggat tgacgtcact taccgctcga tccagggttc gaatgacctc ctcatccggc
     1501 tggaagagat cagatggatc ttccgacagc ccgcccgtca gtggtccctg atagtcatcc
     1561 gcgccggcgg tcacgcccag agtatccggc atcacatcaa gcgatgagcg cgccttttca
     1621 tatttcgcaa tcaaatgcag cagcaggttt tcttcaaacg tccccggaat atacaggtat
     1681 ctgatttccg gttcgcactg ctgaccatag cgatcgatcc taccgtttcg ttgctcaagc
     1741 ctattgggat tgtatggcaa atcaagatgg atcaggtgaa agcaatgcct gtgcagattg
     1801 agaccttctg ccaaggaatc ggtactgatc aaaatcaggc cgtcgcattc gccgaagcgt
     1861 tgcgcggcgg cagcgcggga ccggtcatcg tcctgaccgc cgatcgatag cacctcaccc
     1921 tcgatccccc gagccgcgcg taacgcccgc gcagcagcga cctggctatc ggtatattcg
     1981 gtgtagatca ggatattggc gcgcctgtgt cgcaatctga tcatccgcac ctccagcagg
     2041 atcgccgata actttggatc atgcgcttcg gcggcaatgc caagtcgaat gaggtgcgca
     2101 ggttcggcgt caggctcgag gcgcaatgcc tcggccatac tctctacttc caacgcctgc
     2161 tgattggctt catccgcagc atcgagagtc ccaaaccggg ctgcgcgcct tcgccatgcg
     2221 cggagtgccc gcgctcgttc ctgccttgca gccttggtct ccacctcgcc ggcgcgctgt
     2281 cgtgcaagac gctctgtcac aacgcgcagc gtctcgagac acgccgagat ggtcgaaacg
     2341 gatcgtttca gcaagctgac aaacgccaaa gcgtcatcgt tacccgtgcg ccgccgcaat
     2401 ctcggcacga cgaaggcggc cagtacccga tggaactcac gcacggtctc atgttcgttg
     2461 ccatggacgt cgaccttcac gtgaatgaca tgacggcgac gaaacaacgg cgcaccggta
     2521 tgcggatcgc gaatatgcgc cttgagacgc cggatcacgt ggcggcgata gtcccgcccg
     2581 acaaaccctc cggcgccgtc aacaagcgat ggatccagca aagcaatcag tgacgcgaaa
     2641 tgcgcatcat ggccgtcgtg cggcgtcgca gtcaccagca gcattccgtc cgaacggcga
     2701 gccagaacct ccgccaggcg cctgcggtag gtattctcct gcgacatctg ggaatatccg
     2761 atgcagtgat gcgcttcatc gatgatcacc agatcccacg cggaacgctc caactcctca
     2821 agaacgtgat cctgcttggc aaaatcaagc gccgtgatgc acagagagat cgtatcgaat
     2881 gggttggcgc caagttcgtg cgcacaacgg atgtcccaca gctcggcggc attggtgatg
     2941 agcgtgaatt tcaggccaaa tcgcagcctg gtttcctgct cccattgcca cagcaatgga
     3001 ccggatggtg caacgatcaa tatccggtgc gcacgcctac gggcaatgaa ttctgcagcg
     3061 atcaggccgg cctgaattgt cttgcccagt ccgaccccgt cagccagcag taatctgggc
     3121 cgtggcatat cgagagcccg catgagcggc accagttggt acggttcgac tcgtatgcgg
     3181 ccagggtccc gcaccacgaa cgacgttgca tccggcagcg cattcaacac gtgcgcccga
     3241 tgcatcaggt gccacaggga caatggcgcc ggacattccg gatcaaacgc ctgatcgacc
     3301 cgttcgacct ggtctggagg cacataaatc tgccactcca ggcctgccat gtcgccgtcc
     3361 acacagcgta agtccagaca ttcgcgatct gcgctgcgtt caaccgcaag cacatcccac
     3421 accagtccgc gcgcccgtac ccgactcccg ggttgcagtt ccattcaggc actgccccgg
     3481 gcggagaacc cagactgtga tggcatttcc tggcccacac tttgtcgtgg gccaaccagt
     3541 taggcagcaa aacctgtcaa ttcgtgaaca accccataaa gcattggtta ggatcaactg
     3601 ccgacggaaa caacattgga gaacggcacc gacagggcgc caagttccag attgacggtg
     3661 ttgtttgcgg tcgtgactcc ggtggcggtt ccaacgacgg taaatggcaa tgccgctcca
     3721 cccgcacccg gtgcggcgtt cgtcacggtt acggtatagg cgccgtcggg caaggtctgt
     3781 ccgctgctgt ttgtcccatt ccaggtccag gaattcgcgc cctgagcggc attcacagtg
     3841 acctgctgca atgtgccccc atttgcattc tgtacggtga cggttgccgg tccggcggtg
     3901 ttggccgtga aaaccaccgt accactgccg tcctgtaaag gaacctgggt cgactgcacc
     3961 atcacctgtt taccgacgac ggcagatgcc tgggttacgt ctgcggcctg ggtcagctgg
     4021 atcagcgtgg tcaggctggt gttcgtgttg atctgctgct ccacacttga gaattccacc
     4081 aactcattgg tgaacgaatt cgcatccatc gggctggtcg gatcctgatt ctgcagctgt
     4141 gtcatcagca aattcagaaa gtcgccgaag ttcgaagtca acgacaccag cggattggct
     4201 gcggtggacg cagcggccga tgcggcagcg gcaggcgttg tggtgaccgg ggtcatgcct
     4261 ggatcccttc gctatgcggt tatgtcgagg ccggcacgaa accagcgggt ccgggtctgc
     4321 ccttgatctg tacctgagcc gcgcccgaaa tcattcggcg agtcaccgct ctggcgccac
     4381 gcgccgccac tttggccttg cccggaagtg cccgaaccgg tctccatgct gtccggccgg
     4441 gatgcgctcg caccgacctg ctccggtgtt gccacctgaa aactgacggt tctcccggac
     4501 gacaacacac ctgcctgatc caatgtctgc tgcaacctgg gctcatcccg ttgcagcagt
     4561 tgcagtgtct ccggccgttc cgcgatgata ttgatatggg cggcgccggc attggtctga
     4621 tcgatacgga tctgcacttg accgagttcc gctggctgca agcgaatcgt cacgctctgc
     4681 tggccgtcgt ttttttgcag gatcccaacc agagcgggag caatttgatc agccggcgtg
     4741 gcaggatgta ctttgtcaac cggcgacggc ggcgatgcga ccgtcacgga gggaggcacc
     4801 tgaggcatag cggcttgcgg gatgagcgcg ggcgtctcgg gcaccaggtc gggtcggtct
     4861 gcaaatttct gtgactcaat ggtcgtcaga ggcaatccag gcggcggagt cgcggcgcgt
     4921 ggttggtcac tggccagctg cgctttgcct tgttcaacgg caacaggccg ctctcgccca
     4981 gtgggctgat cgccgccatc gacctttatt tgcgcagcag cggtgaccgg gtgatcggac
     5041 gcaggcggag gcggcaccgg tatcggcggg ctgactgttc caaccggcga ctgaggtgct
     5101 gggacaacgg ctgccgatac gacgtcaggt gctgcgtcgc cgacctgtcg cttggctgtt
     5161 ggggctgaat gttcggcgga cagaaggtgc gtcttgatgt gtgtgccgga accgccgtcc
     5221 gacttcttac cagctggtac ggtgggcaaa agtgccgccg tctctccttg aggaccacca
     5281 tttcttgtat tggcgagtgg cagtacaaca tcggcttccg agacgatggt aacgatcgca
     5341 ttggcatttt gaggcgaggt ttggacgttg ccgttcgatc caggagaacc cgggtccatc
     5401 gcagcatgat cggcgggtgt cctcatttcg tccggaacag acgatgcagg ttgcctcacc
     5461 ggtttggctc gcggatttcc ggacgtggcc agtggctcat tcggcgaagt gccagccccc
     5521 tgtcccgaac gtgatgtcgt tttgctgcca gggactggat taatcacacc cgaaccaggg
     5581 gacggcatgg cggccaatgg cagtgtctct ggcgcatttc ccgtattgaa gggccccgac
     5641 ccggagggct tcgccgccgc caattgcaac gaccccggcc cgctgccaac agtcagaggc
     5701 caccgatcgg actgtttcgt tgcagcaggt accagtggtt ccagaccgtc gccctgatcg
     5761 ggagcatcca aagcagtcag tttcatcgcc gcggatggcg tcgttgactc acttccgcga
     5821 ccgaaatgcc cggagagaac cgccgcaaaa ctgtcgaccg gttcagcctc atcggtggag
     5881 gatgccaacg aaccgccagg acggtttatt gcatttccga gctgtatggg gaccagacct
     5941 gccatcgcgc atcacctcgg tgacgcaaac gcaagtgaca tgccaggtgc ctggcaccgt
     6001 gcgtcacccc gttagtgagg cctgcgggcc gccaacaaaa caccaaagct gcaccgcccg
     6061 gctgattttg cccggtgcca attgccgggt gatacaaaca gccctgatta gcgaggcaca
     6121 ggcggccacc acatcagtat ggcgctcccc aaagccaacg ccgcgaatgc gcggtaggcc
     6181 acaaggtagc cgccaaggaa cgtaaccgag atcccaaaca gtggcggcaa cagcaaacca
     6241 cccgagaaca taagcgcggt gccaagaccg gttgcctcgg ttcggcgcgt cccgcccaaa
     6301 gcagcgtatt cggcgtaagc gaccccggta tatcccccag ccgagcaacc cgcgagcaac
     6361 accaccacca acaccccacc cgccgcccac cccgggctga actgggctgc cagagcggcc
     6421 gcgactgtca taccgatgcc gtgaacccca agcgtttgca tcggcgtcag atatcgatcg
     6481 gcaatccatc cccagatcgg gcggctgatc gaacccgcga gctgatagac cgcaagcatt
     6541 tggcccgcgc ggatcaaatt
//
LOCUS       DATAVD010001497         2261 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1259068, whole genome shotgun sequence.
ACCESSION   DATAVD010001497 DATAVD010000000
VERSION     DATAVD010001497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2261
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1259068"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..872)
                     /locus_tag="VHX39_28775"
     CDS             complement(<1..872)
                     /locus_tag="VHX39_28775"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEX3995188.1"
                     /translation="MNDVVIDALTLLVAAIPVALVTRRFAFPYTVGLVVTGIGIASIG
                     RNTSAVLTRELIYGVILPPLLFEAAINLHWRELRRDALPILALALPGTLIATAVVSTG
                     MMLILRWPLASALSFGVLIAATDPVAVIAMFKDRGVTGRTRLLVESESLFNDGVAAVL
                     FTLLLDWIERSGQRDVAFGHLVPVLILTAPGGVVIGVVCALGAVAIAGRTTDHLVEGA
                     LTFVAAYGSFLIAEHFHCSGVLATVAAGLVVGNLTVLANDEANSITRRGREFVLDLWE
                     FIAFLVNSVVFLLIG"
     gene            1873..>2261
                     /locus_tag="VHX39_28780"
     CDS             1873..>2261
                     /locus_tag="VHX39_28780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995189.1"
                     /translation="MADDDHRSHAQDRRQVLRLAGMTAASGMVALTGHPVQSASQPIS
                     RGPQIGGLRAGMVGFMLPHEQFAVPDLVKLGTFAAHAKFDLLASSDHFQPWQDNEAHS
                     GSAWVTMAAMGAQAAPAWMGTTVTCPTL"
BASE COUNT          478 a          721 c          638 g          424 t
ORIGIN      
        1 ccaatgagca ggaaaacgac cgagttgacc aaaaatgcga tgaactccca taggtccagc
       61 acaaactcac ggccgcgccg ggtgatgctg ttcgcttcgt cgttggccag gacggtcaaa
      121 ttgcccacca ccaatccggc ggcgaccgtt gccagtacgc ccgagcaatg aaagtgctcc
      181 gcaatcagaa acgatccata tgcggcaaca aaggtcaaag cgccttcgac aaggtggtcg
      241 gtggtcctgc ccgcaatggc gactgccccc agagcgcaca caacaccgat gaccactccg
      301 cccggtgcgg tcaaaatcag tacgggcacg aggtgcccga atgcgacatc acgctgcccg
      361 ctgcgttcga tccagtccag cagcaaagta aacagcactg ccgccacgcc atcgttaaaa
      421 aggctctcgc tctcgacgag cagtcgtgtc ctccctgtca cacctcggtc tttaaacatg
      481 gcgatgacag caaccggatc ggtcgcggcg atcagaacac caaatgacag agcggatgcg
      541 aggggccatc gaagaatcaa catcattccc gtggagacca ccgcggtcgc gattaaagtt
      601 ccggggagcg ccaaagccag aatcgggagt gcatcccggc gcaattccct ccaatgcagg
      661 ttgatcgccg cttcgaacag cagtggtggc agaataacgc cgtaaataag ttctcgagtg
      721 agaacagcgc tggtattccg cccgatcgag gcaatcccaa tgccagtcac cacgaggccc
      781 acagtgtacg ggaacgcaaa ccgcctggta accagggcga ccgggatcgc cgcgacgagc
      841 aacgtaagtg cgtcgatcac aacatcattc atgcggtctt ccggtcagag ttcgctccac
      901 tccactgccg cagccatacc gggtaagagg ccagccaccc ggattccact tccggcggct
      961 ttcgagcggc gagcaacgtc gccgttcgtc tcacgctgcg cgccaggctt tccattgggc
     1021 cgaatgcctc gaacccaagt gggacccatg ttgtagatcc gtcggtcgat agttccgtgt
     1081 attccacggt acagccttgg tccggttgcc gggcgttcaa cgtgacctcg cgcacctccg
     1141 cgccggtcgt atcgaattgc ctcagccaac gccgcttgcg gacccgaatc aggggtattc
     1201 cgtaaagggt cagggcgtcc gaaaaccatt tcgtccagag ctcgatcgga ccatggaacg
     1261 gtgccttttg gcagccacta tcgagaaccg agacaaggcc tttgatttcg acgcccctgc
     1321 ccgtcccacg gtgtttgatc ccaggctcct cctggctggt catcggccag atacgcatcg
     1381 gttcggggtc tccgccacgt gccgtacatt cgtgaatatc accatcgata aaccattgtc
     1441 ccagcgcagc caccgcggtt gtccgccaaa accagcgaca ctcagccgat gttttcatga
     1501 aggcccttca ttgtctcagc cgaagccggt gtcgtccggc tggcgcatca attgttcaat
     1561 ggccaaagcg atttcgggtt gcctcgaatt cccgtgccag ccggattttg ccgtcgcggc
     1621 gacactcacc gtcgaaggaa cgtgccgccc cacaccacca ccgggctatg tagcaatgcg
     1681 tcgtctggtt atggcgtcgg gttacgacgg cactggtttg cttcgtcgaa aagtccggtt
     1741 gcgatcggga gagttccctc tgccgcaggt caggacttta cattccaaag gcccgcggcc
     1801 agccgctccg gcgggaacca gtcgccgtgg ctttcgttga aattgttgaa actgcaacat
     1861 cggagatgat ccatggctga cgacgatcac cgatcgcatg cgcaagaccg gcgtcaggtg
     1921 cttcggctgg ccggcatgac ggccgcctca ggaatggtcg cgctcacagg ccatccagta
     1981 cagtcggcct cccagccaat ttcgcgaggt ccacagattg gtggattgcg ggccggtatg
     2041 gtcggcttca tgctgccgca tgagcagttc gcggtcccgg accttgtaaa actcgggaca
     2101 tttgccgcgc acgccaagtt cgatctgctg gccagtagcg atcatttcca gccgtggcag
     2161 gacaatgagg cacactccgg ttccgcctgg gtcaccatgg cggccatggg cgcgcaggcg
     2221 gcgcccgcgt ggatgggaac caccgtcacc tgccccacac t
//
LOCUS       DATAVD010001498         7936 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3492376, whole genome shotgun sequence.
ACCESSION   DATAVD010001498 DATAVD010000000
VERSION     DATAVD010001498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7936
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3492376"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VHX39_28785"
     CDS             <1..180
                     /locus_tag="VHX39_28785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995190.1"
                     /translation="DEGYDSVYGARPLKRVIQRSLQNTLAGMILEGAVKEGETVHISA
                     DNKGLTINGALAEAA"
     gene            complement(393..584)
                     /locus_tag="VHX39_28790"
     CDS             complement(393..584)
                     /locus_tag="VHX39_28790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995191.1"
                     /translation="MATFEIPTLTTDRLKLRAFHADDLDAYAAMQANPEVMRYLLMGR
                     TRLVVRTFFFGAGGEFHST"
     gene            complement(639..1778)
                     /locus_tag="VHX39_28795"
     CDS             complement(639..1778)
                     /locus_tag="VHX39_28795"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995192.1"
                     /translation="MAFFRNTAVNLLNLHYGIHTIAMSGGAAFFLIYLMQSGVPIPQV
                     FVSVALILFGRFVARPLVVGLAVRYGLRAMVVAGTLLCAAQYPLLAEVHGVGIMLAAL
                     IALSSVADTVYWTTYHAYFAALGDDDHRGQQIGVREAIAAVVGIASPLLTGWMLVTVG
                     PRVAFGATAAITAIAALPLLWAPDVAVSRHVPGAFRAALPGLLLFVADGWIGVCIVLV
                     WQIALFISLGQSLLGYGGALAFAALAGAIGSLTLGRHIDAGHGKWAVWYASGMLGLIV
                     TSRAVAAGHATFAILATALGSFGYCLYIPTIMTAVYTLAKRSPCTLRFHVAAEGGWDI
                     GGATSLFIAALATEFGAPLSASILLGLPGVAAMAVMLRRYYARVR"
     gene            complement(2083..3795)
                     /locus_tag="VHX39_28800"
     CDS             complement(2083..3795)
                     /locus_tag="VHX39_28800"
                     /inference="COORDINATES: protein motif:HMM:NF022432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2786 domain-containing protein"
                     /protein_id="HEX3995193.1"
                     /translation="MNRASAAVRLGPAGDEVFARLPALNDAALAFVARDKAEHQARTW
                     LSNVPWIVHDGHWGFARSLALELALITPSLSGSTAFDRLARGMSGPSANDLAASALLR
                     RSQPRIARLTGSRFEDLATGETRTLLPSPFGGVTLTGMVFGRFAVTAEGSAIATGALL
                     PLDQEALAVALGFVRPQVRGLTNPVRCAEAVYRYMVRRGAASAAWREPEPDLPFDPEH
                     DPLDALAADWALLDRDPGPDEIAQVKVLIGVQPLLNALISVGIARDGGVPRLAEAYRR
                     IAAAVIEFMAAREAYGSSRFSLDRAAAEVDAAVKHGRCGFATKALFNDLRERARLAVG
                     RAPGASGDLDKLVQRIRGLREKTVEQGCTEQEAMAAAEKVAELLDRYGLSLSELDLRK
                     QSCEGIGVETGRKRRGPIDDCMGTIAVFFDCRVWAETAESGALSYIFFGLPGDVQAAV
                     YLHDLVALAFAAETATFQKGEFYRGLSAGDRRSATNSYQVGLAQGIINKLNAMRHARD
                     AGRTNGRALVPVKQSIIEQEMERLGLTLRRLTATKRRVIPDAFNSGREAGERFEYRPG
                     IAGA"
     gene            4082..6097
                     /gene="rnr"
                     /locus_tag="VHX39_28805"
     CDS             4082..6097
                     /gene="rnr"
                     /locus_tag="VHX39_28805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008997 - ribonuclease R activity
                     [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HEX3995194.1"
                     /translation="MAKAFKKQPRPHKAPRKGNRFREPRDALPDTSMILITGTDAGGD
                     PVGRPASWDPSDGRAPVIRMIPERPGQPGLAPGDRVLARLRPAGPGQYQGRTLQRLSE
                     APSRVLGVFRPGHPDGRIIPTDRRAKAEWTVPRGQDAGAESGELVLAEPLPHHRLGLK
                     PARVTERLGKMGEAKSISLIAIHTHDIPVAFPDDALLEASHAEAVPAGGREDLRTIPL
                     VTIDGEDARDFDDAVFAEPDGDGFRLIVAIADVAWYVRPGSALDRAARTRGNSVYFPD
                     RVVPMLPEALSNQWCSLLPKQDRGCLFVEMRVDKTGRKRSHRFGRGVMRSAARLTYEQ
                     VQEAVDANAELIVNPQPLYDAFRALLGARTDRGTLDLDLPERKVTLSPSGEVLAVVPR
                     PRLDSHRLIEEFMVLANVAAAEELERLTHPVVYRVHAPPSDEKLTALRGFLNGLGISL
                     PAGNQLHPRDLDRVLRKAAETAEAQLVNEVMLRSQSQAAYGADNIGHFGLALTRYAHF
                     TSPIRRYADLLVHRALISGLRLGAGGLGEGEAMRIADTAAHITATERRAALAERDAID
                     RYLAAFMADKVGARFTARVSGVTRFGLFVTVPASGATGLVPMAMLPDDYWHLDEMEQT
                     LTGSRTRQVFRLSQEIEVRLAEANPITGSLVFQIPRAEQAGKRSRSR"
     gene            6094..7614
                     /locus_tag="VHX39_28810"
     CDS             6094..7614
                     /locus_tag="VHX39_28810"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEX3995195.1"
                     /translation="MIRIAFLMCLCLAWVAYAQGQPTASGFNIEAFAAVQAEAIEFMV
                     PRTLDPVTAEQLAAWGLSGLTTIDPTLTAYVQDANLELLQRGRPLITVTASTSTPASW
                     AQAAARIVAAAYAASPAVRQIGQPAVTKVLFDEMLAHIDPYSRYLPPIEALGDRDRRV
                     GRAGIGVTLVQHGRAVTVRDVVIGSPGALAGIRPGDVIQWVNGRTALNKDRDFIEELL
                     NGPEGTEVRMGWVSPDGSTRGATLTRIMIPPETVFPRRSGDIEVIEITGFSQTTDAHV
                     IQVVRDSLRQPRPVTGIILDLRGNRGGLLRTAVATAEPFLPPGVVVQTAGRAPETNRI
                     WKSTGSDMAKGVRMVVMVDGSTASAAEVLAAALSDRGRAVVMGSSTFGKGVVQTIDPL
                     PDGGELFLTWSRILAPRGWPIQSLGVMPQVCTSKGDDVVRAQLAALASGKWLMEFAVG
                     RHDAARAPLTPDQIVTIREPCPAADPRDGDLAIAERLVEAPKSYAAALLEPMEGER"
     gene            7703..>7936
                     /locus_tag="VHX39_28815"
     CDS             7703..>7936
                     /locus_tag="VHX39_28815"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HEX3995196.1"
                     /translation="MKRLECLDGLRGVLAVYVMLGHMAPFAALPAWIISPLAHGGAAV
                     DVFFILSGLVIFRSLESCRFQARPFLILRTTRIF"
BASE COUNT         1510 a         2584 c         2483 g         1359 t
ORIGIN      
        1 gatgagggct acgacagcgt ttatggtgcc aggccgctga aacgggtgat ccagcgttcg
       61 ttgcagaata cgctggccgg gatgatcctg gagggcgccg tcaaggaagg agaaaccgtg
      121 catatctcgg cggataacaa agggctgacg atcaacgggg cgctggccga ggcggcgtaa
      181 acgattgcgg gacgcggccc gacgggtcgc gtccttcgtt ggcccgcgga tcgtcctggc
      241 aagccggcaa gcaacgcggt tgcaaaggac aatctcttca ttacccgccc acctggtggt
      301 gcacgcaata ttcaaacgca acgccgcgca attcaaagat gcgctcgcaa accgcaccag
      361 gccgctgcac gacgcgtttc gaggcgtcat tgtcaggtcg aatgaaactc gccgcccgcg
      421 ccaaagaaaa atgtgcgaac aaccagtcgc gtgcggccca tgagcaaata gcgcatcacc
      481 tccggattgg cctgcatcgc agcataggcg tcgaggtcgt ctgcgtgaaa cgcgcgcagt
      541 ttcaagcggt ccgttgtgag cgtgggaatt tcgaacgttg ccatcagccc gcctccgccg
      601 aaacgtcggt gtgagactat acaggatttg caccgcggtc accgaacccg cgcgtagtag
      661 cgacgcaaca tgacggccat tgccgcgacg cccggcaacc cgagcaggat actggccgac
      721 agcggcgcgc caaactcggt tgccagcgcg gcgataaaca aggaagttgc accgccgata
      781 tcccagccgc cttcggccgc cacatgaaag cgcaacgtgc agggagaacg tttcgccagc
      841 gtgtataccg ccgtcatgat cgtcggtatg taaaggcaat agccgaacga cccgagcgcg
      901 gtcgccagaa tggcaaacgt tgcgtgtccc gccgcgaccg cgcgtgacgt aacgatcaac
      961 ccaagcatgc ctgacgcgta ccagaccgcc catttcccat gaccggcgtc gatgtgtctg
     1021 cccagagtca aactcccgat tgcgccggcc aacgcggcaa acgccagggc gccgccgtag
     1081 ccaagcaaac tttggcccag agaaatgaac agcgcgattt gccataccaa cacgatgcac
     1141 acgccaatcc agccgtcggc gacaaacagc agcaggcccg gaagcgcggc acggaacgcg
     1201 ccaggcacat gccggctgac cgcaacgtcc ggagcccaga gcagcggtaa cgctgcaatc
     1261 gcagtgatcg cggctgtcgc gccgaacgcc acccgcggcc caacggtgac gagcatccaa
     1321 ccggtcagca aaggactggc gatgccgacc acagccgcga tggcctcgcg cacgccgatt
     1381 tgctggccgc gatggtcatc gtcacccaac gccgcgaaat aagcgtgata tgtggtccaa
     1441 tagacggtgt cggcgactga agagagggcg atcagggccg ccagcataat gccgacgcca
     1501 tgaacctcgg ccagcagcgg atattgtgcc gcgcacagca gcgttccggc gacgaccatc
     1561 gctcgcaggc cgtatcgaac ggccaggccg acaacgaggg gacgagccac gaagcgtcca
     1621 aataaaatca acgcaaccga aacgaacacc tgcgggatcg gaacgccgga ttgcatcaga
     1681 tagatcagga agaatgccgc accaccgctc atggcaatgg tgtggatgcc atagtgcaaa
     1741 ttgagcagat tgacagcggt gttgcgaaag aacgccatgg gcgtggcctt ggattggaca
     1801 ggatcgaggc atgggcgtac tccagccaag ctccggatac cgcgcttgtg tcggcaatcg
     1861 aacggtgcct cagatcactc gatcaggtgc cgcgggagcc cgcgcgaggc caacggcgtt
     1921 accatcgcta cgcgtctttc ggcaaggttt gtgtgccact ggtcaccgca tgaacacaac
     1981 ctcacacgac cgtgacgtag gtcgttacgt tgcaagctga tcaggtcgag cggaccaatc
     2041 gcatggtaag taacgccggg gcacgttgca tcgccaattc gcttacgccc cggcgatccc
     2101 cggccgatac tcaaatctct cccccgcctc acgcccggag ttaaatgcat ccgggatcac
     2161 cctccgcttc gtcgccgtca atcgccgcag cgtcagtccg agccgttcca tctcctgctc
     2221 gatgatcgat tgcttgaccg gcaccaacgc gcggccattg gtcctgcccg catcacgggc
     2281 gtgtcgcatt gcgttcagct tattgatgat cccttgcgcg agacccacct gatacgagtt
     2341 cgtcgcagac cgccgatcgc cggcggaaag cccgcgataa aattcgccct tctgaaacgt
     2401 cgccgtctct gccgcaaaag ccagcgccac cagatcgtgc aaatataccg cagcctgcac
     2461 atctccaggc aggccaaaga aaatataact cagcgccccg ctttccgcgg tttcggccca
     2521 tacacggcaa tcgaagaaaa ccgcgatcgt ccccatgcaa tcgtcgatcg gcccacgccg
     2581 cttacgaccg gtttcgacgc cgatcccctc gcagctttgc ttgcgcagat cgagttcgct
     2641 caggcttagc ccgtaccggt ccagcaattc ggcaaccttc tcagctgctg ccatcgcttc
     2701 ctgttccgtg cagccttgct cgaccgtctt ctcgcgcaac cccctgatcc gttgcacaag
     2761 cttatcgagg tcgccgctcg cacccggcgc tcgcccgaca gccagccgcg cacgctcgcg
     2821 caaatcgttg aacagtgctt tcgtggcaaa cccacaacgg ccgtgtttga ccgcggcgtc
     2881 cacctcggcc gcagcgcgat cgaggctgaa ccgcgacgac ccataggcct cgcgcgcagc
     2941 catgaactcg atcaccgcgg cggcgatccg ccggtacgcc tcggccagac gaggcacccc
     3001 gccatcgcgt gcgatgccga cactgatcaa cgcattcagc agcggctgca ccccgatcaa
     3061 cacttttacc tgggcgatct cgtccggccc aggatcgcga tcgagcaaag cccagtcggc
     3121 ggcgagggca tcaagaggat cgtgctccgg gtcgaatggc aggtcgggtt cgggctcgcg
     3181 ccaagcggcg gaggccgcgc cgcgacggac catgtaccgg taaacagcct cggcgcagcg
     3241 gaccggattt gttagcccgc ggacctgagg acggacaaag ccgagtgcca ccgcgagtgc
     3301 ttcctggtcc aatggcagca gcgcgccggt tgcgatcgcc gacccctcgg ctgtcacagc
     3361 gaaacggcca aacaccatac cagtcaaagt gacgcccccg aacggcgacg gcagcaatgt
     3421 acgggtttcg cccgttgcca ggtcctcgaa ccggctcccg gtcaggcgcg caatacgcgg
     3481 ctggctccga cgcagcagcg cggaggcggc gaggtcgttt gccgacggcc cggacatccc
     3541 acgcgccaat cggtcaaacg cggtcgatcc gctgagcgac ggcgtgatca gtgccagttc
     3601 caatgcgagc gagcgggcga acccccaatg cccgtcatgc acgatccatg gcacattgga
     3661 cagccaggtt cgtgcctggt gctccgcttt atcgcgcgcg acaaacgcaa gggcggcatc
     3721 attcaacgcc ggcaacctgg caaaaacttc atccccggcg ggaccgagac gtacggcggc
     3781 gcttgctcgg ttcattatca cctcgctcta tggccgtggt tgaactggac ggctgcgctc
     3841 acttatcaga ggcgcacgag tcgcaagaat tctgcaccga ggactgcgta tgtggtggct
     3901 tctgcagggg caacgccacc cggccaggct ccgccatggc aacaacagag gcagccgcgg
     3961 cgaaaacatt cggtccgggc agaaccgaaa acgcgaggcg tctcgggaat atgcctggtt
     4021 tgaccggacg gactcgggca tcatccgccc gccctggaat cgcaacctga tcggcaagtg
     4081 agtggccaaa gccttcaaga aacaaccacg cccccataaa gcaccccgca aaggcaaccg
     4141 cttccgcgaa ccgcgcgacg cactgccgga cacctcgatg atcctgatca ccggcaccga
     4201 cgcgggcggc gatccggtcg gccggcccgc ctcctgggat ccgagcgatg gccgtgcgcc
     4261 cgtgatccgg atgatcccgg aacggccagg ccagccgggc cttgcccccg gtgaccgtgt
     4321 gctcgcccgg ttgcggccgg ccggccccgg ccagtaccaa ggccgcacac tccaacgtct
     4381 cagcgaggcg ccgtcccggg tgctcggcgt gttccggccg ggccatcccg atggccgcat
     4441 catcccgacc gatcgccgcg ccaaggccga atggacggtg ccgcgtggtc aggacgccgg
     4501 tgccgaatcc ggcgaactcg tgctggccga acctctgccg caccaccggt tgggcctcaa
     4561 acccgcccgg gtcaccgaac gcctcggcaa aatgggtgag gcaaagtcga tcagcctcat
     4621 cgccatccat acccacgata ttcccgttgc cttccccgac gacgccctgc ttgaggcctc
     4681 ccatgccgag gccgtccccg ccggtgggcg cgaggatctt cgaactattc cgctggtcac
     4741 catcgacggc gaggacgcgc gcgatttcga cgatgctgtt ttcgccgaac cggacggcga
     4801 cggtttccgc ctgattgtgg cgatcgccga tgtcgcctgg tatgtgcggc ccggttccgc
     4861 cctcgatcgc gcggcgcgca cgcgcggcaa cagcgtttac ttccccgatc gcgtcgtccc
     4921 catgctgccg gaggctttgt ccaaccaatg gtgcagcctg ctgccgaagc aggaccgcgg
     4981 ctgcctgttc gtcgaaatgc gggtcgacaa aaccggccgc aaacggtcgc atcgtttcgg
     5041 tcgtggtgtt atgcgcagtg cggcacggct gacttacgag caagtccagg aggcggtcga
     5101 cgccaatgcc gagctcatcg tcaacccgca accgctttat gatgcgtttc gtgcgctgct
     5161 cggggcacgc actgaccgcg gcacgctcga ccttgatttg ccggagcgca aggtaacgct
     5221 cagcccatcc ggtgaagtgc tggcggtggt gccgcggcca cggctcgaca gccatcggct
     5281 gatcgaggag ttcatggtgc tggccaacgt tgcggcagca gaagaactgg agcggctgac
     5341 ccatcctgtc gtgtatcgcg tgcacgcgcc cccatccgat gaaaagctca cggcgctgcg
     5401 tggctttctg aacgggctgg ggatttcgtt accggctggc aatcagttgc atccacgcga
     5461 tctcgatcgt gtattgcgta aagccgccga aacggcggaa gcccagttgg tgaatgaggt
     5521 gatgttacgg agccagtcgc aggcggcgta cggtgcggac aatatcgggc atttcggtct
     5581 cgcgctgacg cgctatgcgc atttcaccag tccgatccgg cgctatgccg atctgctggt
     5641 gcaccgggcg ctgatcagcg gactgcggct tggcgcaggc ggcctgggcg agggtgaggc
     5701 gatgcggatt gccgacaccg ctgctcacat caccgcgacc gagcggcgcg cggcgttggc
     5761 ggaacgcgac gcgatcgacc gctacctcgc cgcgttcatg gccgataagg tcggtgctcg
     5821 attcacggcg cgtgtctcgg gggtgacccg attcggcctg ttcgttactg tgcctgcgag
     5881 cggggctacc gggttggtgc cgatggccat gctgcctgat gattattggc atcttgacga
     5941 aatggaacag accctgaccg gaagccggac ccgccaggtg ttccgcctgt cgcaggagat
     6001 cgaggttcgg ctcgcggaag cgaacccgat caccggaagc ctcgtctttc agatcccacg
     6061 ggcggagcag gcggggaaac ggtcccgttc ccggtgatcc gcatcgcctt cctgatgtgc
     6121 ctgtgtctgg cctgggtcgc gtatgcccag ggtcagccga ccgcgtcggg gttcaatatt
     6181 gaggcattcg cggcggtgca ggccgaagcg atcgaattca tggtgccgcg caccctcgac
     6241 ccggtgacgg cggagcaact ggcggcctgg ggactgagcg gtctgaccac catcgatccc
     6301 acactgacgg cgtatgtcca ggatgccaac ctcgaattgc tgcaacgtgg ccgccccctc
     6361 atcacggtca ccgcatccac ctcgaccccc gcctcctggg cgcaggctgc agcacggatc
     6421 gtggccgcgg cttatgcggc ctcacccgcg gtgcggcaaa tcggacagcc ggccgttacg
     6481 aaggtgctgt tcgatgagat gctcgctcat atcgacccgt attcccgcta ccttccaccg
     6541 atcgaggcct tgggcgaccg ggaccggcgc gtcggacgtg ccggcattgg cgtgactttg
     6601 gtgcagcacg gccgcgccgt caccgtgcgg gacgttgtca tcggtagtcc gggtgcgttg
     6661 gcgggtatcc gtccgggcga tgtgatccag tgggtcaatg gccgcaccgc actgaacaag
     6721 gatcgcgatt tcatcgaaga actgttgaac ggtccggaag gcaccgaggt ccggatgggc
     6781 tgggtcagtc cggatggtag cacccgcgga gcgactttga cgcgcatcat gatcccgccg
     6841 gagacggtgt ttccccgccg gagcggcgac atcgaagtca tcgagatcac cggcttcagc
     6901 cagaccacgg atgcgcacgt aatccaggtt gttcgtgaca gtctgcgtca gccgcggccg
     6961 gtcaccggga tcatcctcga tttgcgcggc aatcgcggtg gcttgctgcg gaccgctgtg
     7021 gcgactgcag aaccgttcct gcccccgggt gtcgtcgtgc aaaccgccgg gcgagccccg
     7081 gaaaccaacc gcatctggaa atctactggc agcgacatgg cgaaaggcgt gcgcatggtc
     7141 gtgatggttg atgggagcac tgccagtgct gcggaagtgc tcgccgctgc cctgtcggac
     7201 cgcggccgcg cggtggtgat gggcagttcg acctttggca agggcgtggt gcagaccatc
     7261 gacccgctgc ctgacggtgg cgagttgttt ctgacctgga gccgcatttt ggcaccgcgt
     7321 ggatggccga ttcaaagcct cggcgtgatg ccgcaggttt gcacgagtaa gggggatgac
     7381 gtggtacgcg cgcaactcgc ggcgttggcc agcggaaaat ggctgatgga gtttgcggtc
     7441 gggcggcatg acgcggcgcg ggctccgttg acgccggatc agatcgtgac gatccgggag
     7501 ccctgcccag cggcggatcc acgcgacggg gatctggcga ttgcagagag gttggttgag
     7561 gcgccgaaga gttacgcggc agctttgttg gagccgatgg agggtgagcg gtaggatctg
     7621 gaatcgtctg agcgcgagct cgcaccgaca aaaaacccac cctcttcgtg atttattaac
     7681 cgaggtcccc caacctcgcg tcatgaagcg tctcgaatgc ctggacggac tgcggggtgt
     7741 gctggccgtc tacgtgatgc tcggccatat ggcgccgttc gccgcattgc cggcctggat
     7801 catctcgccg ctggcgcacg gtggcgcagc ggtcgacgtc tttttcatcc tgagcggtct
     7861 cgtcatcttc cgctccctgg agagttgccg cttccaggca cgaccctttc tgattttgcg
     7921 caccaccagg attttt
//
LOCUS       DATAVD010001499         4485 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3492445, whole genome shotgun sequence.
ACCESSION   DATAVD010001499 DATAVD010000000
VERSION     DATAVD010001499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4485
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3492445"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..233
                     /locus_tag="VHX39_28820"
     CDS             <1..233
                     /locus_tag="VHX39_28820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HEX3995197.1"
                     /translation="FLVDAGVGTASDAAIAMELGCTAVLLNSAIAHARNPVVMARAMS
                     HAIQAGRLAYLAGRMPRRMGADPSSPLSGLIR"
     gene            complement(309..722)
                     /locus_tag="VHX39_28825"
     CDS             complement(309..722)
                     /locus_tag="VHX39_28825"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HEX3995198.1"
                     /translation="MTIDAPAVADEVAAGDAQASDAAAFDAEEFGALSEMIGEDGVRE
                     MVEIFAADTRQRLQRLTAGGQNDATLMREMHTLKGAAGTVAAPRLALLGRAFERAAQR
                     GIGPTSADLKAIDMALEGFLAGVRTWTGSAGINGH"
     gene            complement(1218..1865)
                     /locus_tag="VHX39_28830"
     CDS             complement(1218..1865)
                     /locus_tag="VHX39_28830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995199.1"
                     /translation="MPANSYTRPTVSAAPAMPPLLMPQPPIAPVVPAAHVVDLMTIEG
                     TAAFGARWKAKEAKIVECPALSDSMPEFTSTYDVDPHAELLGFDDAAWPEVAATDLGA
                     RRGGGMVSFFWFRATLTIPERATGFDTNGAKAVLTVNVDDYAEVWINGVMPRAAGRPS
                     PATIQGFNMPNRVVLRDTVTPGDRFEVAVFAINGPISAAPANFLWFREAKVEFYR"
     gene            2122..2928
                     /locus_tag="VHX39_28835"
     CDS             2122..2928
                     /locus_tag="VHX39_28835"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3995200.1"
                     /translation="MPTFRPTPDLEMHYAVDDFTDPWRKPQTILMLHGNAESGLAWYA
                     WVPRLARSYHVVRPDMRGFGKSSVMPANHAWNLDELTEDFCGLMDHLGIERFHLVGAK
                     IGGTIARAFAARQPKRLITLTVVGTPPPLRVGATERVPELIRTFQSKGVEYWAKENMA
                     DRLGSGFPPEGVEWWGKFMGGTAVSTQIGFMGTIACADITTDLPKISTPTLVITTENS
                     GLGTVEETRAWQQQIRDSELVVLPGNSYHVAATHADKAAAATIDFLRRRG"
     gene            complement(2948..4261)
                     /locus_tag="VHX39_28840"
     CDS             complement(2948..4261)
                     /locus_tag="VHX39_28840"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995201.1"
                     /translation="MPISSTSGGVMPPPTTLRRVVIAATIGNVLEWFDFTIYGFLAVV
                     LAQVFFPTGDGTVSLLVTFGAFGLAYLVRPLGAIFVGSYTDKHGRKAGLTLSIALMML
                     GTTLMALTPGYATIGLAAPILITLARLLQGFSVGGEFGSSVAFLMEHGSHRKGFAASW
                     QFSVAGLITALASLFGVALNTLLSHDQLLSWGWRLPYIFGMLVGPAGLYIRSRLAETQ
                     EFLEAKQPEAMPIRELLQKQPLALVLGIGASIISNSSFYILLYIPTYGQKTLHLPAYT
                     GFVATLIGGVVLAVCAPLFGHWSDKMARPRIMVATAWLFVLTSWPCFFMMASWPTLAS
                     CIFACAWLQLLKAGYSGVLPSLLGEQFPVATRAIGVSLSFSTAVTIFGGFAPLVATWL
                     IAHTGDPKSPGFYLVATAAMSAAALAMIQMRSARQVRAKLAATSA"
BASE COUNT          845 a         1433 c         1420 g          787 t
ORIGIN      
        1 cgttcctggt tgatgccggg gtcggcactg cgtcagacgc agcgatcgca atggagcttg
       61 gctgcaccgc ggtgttgttg aattccgcca tcgcgcacgc ccggaacccg gtggtgatgg
      121 cgcgcgccat gtcgcacgca atccaggccg gcaggctggc gtatctcgcg ggccggatgc
      181 cgcggcgaat gggcgccgat ccgtcgagcc cgctcagcgg gttgatccgt taggcggcga
      241 gggtattccg gcccaggccc ttgctttgat agggtctcgt gaaatttcga acggcagcgc
      301 ggcggcgttc agtgaccgtt gatgccggct gacccggtcc aggtccgcac ccccgccaaa
      361 aacccttcga gcgccatgtc gatcgccttg aggtcggcag acgttggtcc gatgccacgc
      421 tgcgcggccc gctcgaacgc gcgacccaga agtgccaggc gcggcgccgc aaccgtgccg
      481 gctgcccctt tcagcgtatg catctcccgc atcagggtgg catcgttctg accacccgcg
      541 gtcagccgct gcagccgctg gcgcgtatct gcggcgaaga tctcgaccat ttcacggaca
      601 ccgtcctcgc cgatcatctc actcaacgcg ccaaactctt cggcgtcgaa tgccgccgca
      661 tccgatgcct gagcgtcacc cgctgccacc tcgtccgcca ccgccggcgc atcgatcgtc
      721 atggaatgct tcctgtgcaa ggtcgtcgcc tgatttcgac cttgttggtt aaaaacctat
      781 gaaaaatgct gggttcgtcg aaaaaatgat gcgtgtatgt ggcgccggat ttgggccaca
      841 ggccttgagc gcgacctgag tggtgttgct cgccggccgg ccggttctaa gttgcatccc
      901 ggaggcggca tcggcacgaa gccagggccg atctgcagac gaataacagc tgccccgccg
      961 cgtgcctgat ctcgtccggc gccaaatcgc agcgtcaagg tcgtgccggc gtttgttttc
     1021 tcctcgcaac cgacgccgcc ggggcgtagc gatctccacc gccatgactg agacgggtgt
     1081 ctcacgggtg gggtccgatc catccaacgc tttgactccg atcgggtatc gctgccacag
     1141 agtcgtggcc ggcgttcgac gatcaccagc acgccggggc tttgccgaac gccggtggtg
     1201 ggtcgaaacc ttcctggtca gcggtagaat tcgaccttcg cttcgcgaaa ccataggaaa
     1261 ttcgcgggtg cggcggaaat cggtccgttg attgcgaaca cggcgacctc gaacctgtcg
     1321 cctggcgtaa cagtatcacg cagcaccacg cgattgggca tattgaaccc ctggatcgtt
     1381 gccggactgg gtctgccggc agcgcgcggc atcacgccat tgatccagac ttccgcatag
     1441 tcgtcgacat tcaccgtcag taccgccttc gcaccgtttg tgtcgaaccc tgtggcacgc
     1501 tctggaattg tcagggtcgc gcgaaaccag aagaacgaca ccatgccgcc accgcgccgc
     1561 gctcccagat cggtcgcggc gacctccggc caggcggcat cgtcgaagcc cagcagttcg
     1621 gcgtgcgggt cgacgtcgta ggtggaagtg aattccggca tcgagtcgga cagcgccggg
     1681 cattcgacaa tttttgcttc ctttgccttc cagcgcgcac cgaaggcagc ggttccctcg
     1741 atggtcatca ggtcgaccac atgcgccgca ggcaccactg gcgcaatcgg cggctgcggc
     1801 atcagcaaag gcggcatcgc cggtgcggca gaaaccgtag gcctggtgta gctgttcgct
     1861 ggcatgtccg tttcccttct gtttgatcgc cgatcatagc cggaagccat ggcagagtgg
     1921 gagacccggc cgatgcaccg aagccggcat tcgggtaacg ttcatggcgc agacagtcct
     1981 cgcggtgggt ccgaatcgag cagtcccgcc cgttaggaag ttattgattt tcctgccggc
     2041 ggttgacacc agaccacgcg tggcggtcag tacttggtca gcctggccgc atcgcaacac
     2101 cgaaactccg gagcaacgcc gatgccgaca tttcgcccca cccccgatct cgagatgcac
     2161 tacgcagtcg acgatttcac cgatccatgg cgcaagccgc aaaccatcct gatgttgcat
     2221 ggcaatgccg agagcgggct ggcctggtat gcctgggttc ctcgattggc gcgctcgtat
     2281 cacgtagtgc gtcccgacat gcgcggcttc ggcaagtcgt ccgttatgcc ggccaaccac
     2341 gcctggaacc tcgatgaact gaccgaggat ttttgcggat tgatggacca cctcgggatc
     2401 gagcggttcc atctcgtggg cgccaagatc ggcggcacga tcgcccgggc ctttgccgcg
     2461 cggcagccga aacggctgat caccctgacc gtcgtcggca cgccgccgcc gctccgggtc
     2521 ggcgccacgg agcgggtacc tgagctgatc cgcaccttcc agtccaaggg cgtcgagtac
     2581 tgggccaagg aaaacatggc ggaccggctt ggcagtgggt tcccgccgga aggggtcgaa
     2641 tggtggggca aattcatggg cggaacggcg gtgtcgaccc agatcggctt catgggcacc
     2701 atcgcctgtg cagatatcac gaccgatctg ccaaagatct ccaccccgac gctggtcatc
     2761 accacggaaa acagcggcct tggcacggtc gaggaaaccc gcgcctggca gcagcaaatt
     2821 cgcgattccg aactggtggt gctgccgggt aattcatacc acgtcgccgc gacccatgcc
     2881 gacaaggcgg ccgctgcgac catcgatttc ctgcgacggc gcgggtgacg ttagccgcga
     2941 ggcagcgtca cgccgatgtt gcggccagct tcgcccgcac ctgccgcgcc gagcgcatct
     3001 ggatcattgc cagcgcggcg gcgctcatgg cggcggtcgc gaccagatag aagcccggcg
     3061 acttcggatc gccggtatgc gcgatcagcc atgtcgcgac caacggcgcg aagccgccga
     3121 agatcgtgac cgcggtgctg aaactcaacg atacgccgat ggcgcgggtg gccaccggga
     3181 actgctcgcc aagcagcgac ggcagcaccc cgctgtagcc cgccttgagc aattgcagcc
     3241 aggcacaggc gaagatgcac gacgccagag tgggccacga cgccatcatg aagaagcacg
     3301 gccacgaggt caggacaaaa agccaggccg tggcgaccat gatccgaggc cgcgccatct
     3361 tgtcggacca atggccgaac aacggggcgc acaccgcgag cacgacacct ccgatcaacg
     3421 tcgcaacaaa accggtatag gccggcaggt gcaacgtctt ttgtccatag gtcgggatat
     3481 acagcagaat atagaacgaa ctgttcgaaa tgatcgaggc gccgatcccc agtaccaacg
     3541 ccagcggctg cttttgcagc aattcccgga tcggcattgc ctcgggttgt ttggcctcca
     3601 gaaactcctg cgtttccgcc agccgcgagc gaatgtaaag gcccgccgga ccgaccagca
     3661 tgccgaaaat atagggaagc cgccaacccc agctcagcaa ctggtcatgg ctcagcaaag
     3721 tattcaacgc gacgccgaac agcgaggcga gcgcggtgat cagacccgcg acggagaatt
     3781 gccaactggc ggcgaagcct tttcgatgcg agccatgctc catcaggaac gcgaccgaac
     3841 tgccgaactc gccgccgacc gaaaatccct gtagcaggcg ggcgagtgtg atcagaatgg
     3901 gtgcggcgag gccgatggtc gcatagcccg gcgtcaaggc catcagtgtc gtgcccagca
     3961 tcatcagcgc gatcgagagc gtcagtccgg ctttgcgccc gtgcttgtcg gtgtaggagc
     4021 caacgaagat cgctcccagc gggcgcacca gatacgcgag gccgaaagcg ccgaacgtga
     4081 ccagcagcga caccgtccca tcccctgtcg ggaagaatac ctgggccagg acgaccgcga
     4141 ggaagccgta gatggtgaag tcgaaccatt cgagcacgtt gccgatggtg gcggcgatga
     4201 cgacgcgtcg cagcgtcgtt ggcggcggca tgacgccgcc cgacgttgag ctgatgggca
     4261 tccctgtatc cttttttaac ccggcctttg gcggccgatg tcctgacata tgactgccgg
     4321 tgcgacgcgg tggcaagtgg gttttgtctg gcagtttcca gatgcggccg ggtgcgcggc
     4381 atcctaagtc ggggtggcga tgtggacgga cggccgggat caagcctgct cagtcgtacc
     4441 ttgggttacc gcgagcggta ggcgcccgat gggcgcgggc gggtt
//
LOCUS       DATAVD010001500         1919 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2004075, whole genome shotgun sequence.
ACCESSION   DATAVD010001500 DATAVD010000000
VERSION     DATAVD010001500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2004075"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..991)
                     /locus_tag="VHX39_28845"
     CDS             complement(<1..991)
                     /locus_tag="VHX39_28845"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX3995202.1"
                     /translation="MTATDFDIATLRARRTNKWHKFASDVLPAWVADMDFGVAPSITA
                     ALTRLTENQEYGYAAREGALASAFVRRMQCRFHWTTNAADTVAIGDLVQASFSSVMAF
                     SEPGDAILLQLPSYPPFMRAIEDTGRRLIANPMRDDGEHWVLDLAAYDATPDPRTRML
                     IFCHPQNPTGRAFSRAELEAVAAFAIRHDLIVVSDEIHADIVYPGRTHIPLASLHPEI
                     AARTITITSATKSFNIPALRCAVMHFGAAALKQRFENRIPSRLLGSPGVTGVDATVAA
                     WDDGQSWLDEILAQLLANRDWLVRTVAADMPGVTMRVPEATYLAWLDCRALQIP"
     gene            complement(1296..>1919)
                     /locus_tag="VHX39_28850"
     CDS             complement(1296..>1919)
                     /locus_tag="VHX39_28850"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX3995203.1"
                     /translation="PAAVTELSPAAVKVSRIAEQNGDQNFLLLDKTEGRIIAFEHGTP
                     TFSGSALTGESLTDIIPQDAFSKSFSETKGLKYKVTPAGRFTVSPGFDPAYGETLDVN
                     EVHGKDWDISIHRVWLGAPAERRDVRLRSATGQDKHITYGCIDVDANTIHQLLRHVSH
                     GSRIALYILPVDEHLVSTLFQPHGFAHDTATPGVRPEVRMVSGTTVR"
BASE COUNT          377 a          567 c          620 g          355 t
ORIGIN      
        1 ccggtatttg cagggcgcga caatcgagcc aggccagata cgtggcctcg gggacccgca
       61 tcgtcacgcc tggcatgtca gcggcaacgg tgcgcaccag ccaatcgcga ttggccagca
      121 gttgcgccag aatttcatca agccacgact ggccgtcatc ccacgcagca acggttgcat
      181 cgacgccggt cacgcccggt gagccaagca aacgtgacgg aatgcggttt tcaaaccgtt
      241 gcttcagtgc agcggcgcca aaatgcatca cagcgcaacg cagcgctgga atgttgaaac
      301 ttttggtcgc cgaggtgatg gtgattgtgc gcgcggcaat ctccggatgc agcgaagcca
      361 gcggaatatg cgtgcggccg ggatagacga tgtcggcgtg gatctcatcg gacaccacaa
      421 tcaggtcgtg acggatggca aacgctgcaa cagcctcgag ttccgcgcgg ctgaaggcac
      481 gtccggtggg gttctgcgga tggcagaaaa tcagcatgcg cgtgcgcgga tcgggcgtgg
      541 cgtcgtatgc ggccaggtcg agcacccagt gctcaccgtc gtcgcgcatg ggattggcga
      601 tcaggcgacg gccggtatcc tcgatggcgc gcatgaacgg cggataggac ggaagctgca
      661 gcagaatcgc atcgcccggc tcgctgaacg ccatgacgga tgaaaagctg gcctgcacca
      721 gatcgccaat cgccacagta tcggcggcgt tcgtggtcca gtggaagcgg cactgcatac
      781 ggcggacgaa ggcggaggca agggcgccct cgcgcgcggc atagccatat tcctggtttt
      841 cggtcaggcg cgtcagtgcc gcggtgatcg agggcgccac gccaaaatcc atgtcggcaa
      901 cccaggccgg cagcacatcg gaggcaaatt tgtgccactt gttggtgcgc cgcgcccgca
      961 aggtggcgat gtcgaagtcg gttgctgtca tacgttggct ctccgtgcag gcgtttccag
     1021 gggcgaagcc cagagcgggc ttagcacctc gctgcgcagc aatcgactgc cgacatggcg
     1081 ctttgccggg cggttggcgc actgcgacgg gaatgccgtc agcccaggtc gggcaaagcc
     1141 cgatgcaatc ggatgtgcga gaggttctaa gtgctacggc agaagccgga agtcccgagg
     1201 tcctgatcag gctgtaataa ctgaaggggt cgacgcgtat gcatcacaac tcctggaggc
     1261 gacccttatc cggcgtcagg attgggcaac ctgcgtcacc gaaccgttgt tccgctcacc
     1321 attcgaacct cgggtcgtac cccaggcgtg gcagtgtcat gcgcgaaacc gtgtggttgg
     1381 aacagcgtcg aaaccaggtg ctcgtccacc ggcaggatgt agagcgcgat cctggacccg
     1441 tgggacacgt gccgcaacaa ttggtgaatc gtattcgcgt cgacgtcgat gcaaccatag
     1501 gtgatatgtt tgtcctgacc tgtggcactc cgcagccgca catcccggcg ctccgccgga
     1561 gcgcccaacc agactctatg gatcgaaata tcccagtcct taccatgcac ctcattcaca
     1621 tcgagggttt cgccataggc cgggtcgaag ccgggcgaaa cggtaaagcg tccggccggc
     1681 gtgaccttgt atttcaggcc cttggtctcc gagaatgact tgctgaacgc gtcctgcgga
     1741 atgatgtcgg tcagactctc cccggtcaga gctgagccgc tgaatgttgg cgtgccgtgt
     1801 tcgaacgcga tgatccggcc ttcggtcttg tcgagcagca ggaagttctg atcgccattc
     1861 tgttcggcga ttctgctgac cttcaccgcc gcgggcgaca actctgttac ggcggcggg
//
LOCUS       DATAVD010001501         1700 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1816983, whole genome shotgun sequence.
ACCESSION   DATAVD010001501 DATAVD010000000
VERSION     DATAVD010001501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1816983"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VHX39_28855"
     CDS             complement(<1..183)
                     /locus_tag="VHX39_28855"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEX3995204.1"
                     /translation="MSGNKAPQTIAAANGLGEDSAFGAVAPPIYLTTTFSFAGYGQAR
                     QYDYSRSGNPTRDLLAD"
     gene            705..>1700
                     /locus_tag="VHX39_28860"
     CDS             705..>1700
                     /locus_tag="VHX39_28860"
                     /inference="COORDINATES: protein motif:HMM:NF013173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
                     /protein_id="HEX3995205.1"
                     /translation="MARLVIVSNRIPLPSERGPRAGGLAVALADALRPGSLWFGWSGR
                     RTAAPAEMPEAVEAGGITYATIDMTEAEYRAFYVGFANGVLWPLLHFRLGLMTFRRED
                     YQGYCAVNRRFAAALNSLLLPDDLIWVHDYHLIPLAQELRRLGVRNRIGFFLHIPFVP
                     PVMLEVLPCATEMLEGLAAYDVVGFHTDAYRQAFLQCARQMLGATPRHNSFVHNGSAV
                     DAIVDPIGIDTEMFAKDAVRGARGAESQRLRDSMSDRGLAIGVDRLDYSKGLPNRLIA
                     FGRLLATYPEHRRKVNFLQVAARSREDGSEYQLLRRELDRIAGNINGSYSEFDWIP"
BASE COUNT          287 a          509 c          536 g          368 t
ORIGIN      
        1 gtcggccaac agatcgcgcg ttggattgcc cgatcgcgaa tagtcgtact gcctcgcctg
       61 gccgtagccg gcgaaactaa atgtggtcgt cagatagatc ggcggcgcaa ccgctccgaa
      121 cgcgctgtcc tcgccaagac cgttcgccgc cgcaatcgtt tgaggcgctt tgtttccgga
      181 catccagctg ttctcctgcc gcggggttac gccttgcccg cttacgtcgt gaaccttgcc
      241 gccgcaagga ctgcgggatc gctttgattc cgccaatagt gctccgaggg actgagttgc
      301 tcccctggct gcggtccacc cctggaaaca cagcaacctt actttgattg gatttcgatg
      361 ctatcgtggc cggcgcggta agacttaggc tgggaatatc acgccttacg ctcacgggcg
      421 caggcggcgg catggacgaa atcgcgagtt tggggaacgg tggcacgacg ccgtgcgttc
      481 acaagaaatg agggcgcgcc ggatgaccat gactgaacga tcatgacgac tgatctcgat
      541 ctggcggtgc gtggtaactg caccgccata tccgtgatct ccctgccagg gcgccacgtc
      601 cgcctccgtt ttcccaggtt atcgggcggt ttcccgcaga catcttctcg gttcggactg
      661 atttccgtcg cgatgcggct ttcccgttca tcggaggagg gcatgtggca cggctcgtaa
      721 tcgtttccaa ccggattccg ctaccttcgg agcgcgggcc acgggccggc ggactggccg
      781 tggcgctggc agacgcgctg cggcctggtt cgctgtggtt cggctggagt ggccggcgca
      841 ccgcggcgcc cgcggagatg ccggaagccg tcgaggcggg cggcatcacc tatgccacca
      901 tcgacatgac ggaggcagaa taccgcgcgt tttacgttgg gtttgcgaac ggcgtgttgt
      961 ggcctttgtt gcatttccgg ctcggcctga tgacattccg acgcgaggac taccaaggct
     1021 attgtgcagt caatcgccgc tttgccgccg cgctgaattc cttgttgctg ccggatgacc
     1081 tcatctgggt tcacgactat cacctgatac cgttggctca ggaattgcgg cgtttggggg
     1141 tacgaaatcg gatcggcttt ttcctgcata tcccgtttgt gccgccggtg atgcttgaag
     1201 tactaccctg cgcgaccgag atgctggaag gcctggcggc ctatgatgtg gtcggctttc
     1261 acaccgacgc gtatcgccag gccttcctgc aatgcgctcg gcaaatgctc ggcgcgacac
     1321 ctcgtcacaa ctcgttcgtc cacaacggct cggcggtgga cgccatcgtc gatccaattg
     1381 gcatcgatac cgagatgttc gccaaggatg cggtacgggg cgcgcgtggg gcagaatcgc
     1441 agcgactgcg cgacagcatg tcagaccgcg ggttggcgat cggggttgat cggctggatt
     1501 actccaaggg tctgcccaat cgtctgatcg ccttcggccg gttgctggcc acctatcccg
     1561 agcaccgccg caaggtgaat ttcctccagg ttgccgccag atcgcgggag gacggcagcg
     1621 agtaccagct gcttcgccgc gagttggacc gtatcgcggg caatataaat gggagttatt
     1681 cggagttcga ctggattcca
//
LOCUS       DATAVD010001502         3573 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2935940, whole genome shotgun sequence.
ACCESSION   DATAVD010001502 DATAVD010000000
VERSION     DATAVD010001502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3573
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2935940"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..769)
                     /locus_tag="VHX39_28865"
     CDS             complement(5..769)
                     /locus_tag="VHX39_28865"
                     /inference="COORDINATES: protein motif:HMM:NF025033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEX3995206.1"
                     /translation="MPREQSSDRAPGAVTLDHLLGGRISYRQPRDGFRAAIDPVLLAA
                     AVPARAGERVLDGGTGAGAALLCLASRIPDICGLGVDRNPELLRLAQANAIANGRPGL
                     LFAAADLTTSPIGGEFDHAMANPPYHPVEGTRSPSSAREAAKRSAPGQLNEWVAALSR
                     PLRNRGTLTMILPPRMLEQALIAMRDCKVPAECVFPIWPKQGMPARLTLVQARKFGRS
                     PLRLASGLVLHAETGAFCPKADLILRSGGALRLTGG"
     gene            complement(836..928)
                     /locus_tag="VHX39_28870"
     tRNA            complement(836..928)
                     /locus_tag="VHX39_28870"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(892..894),aa:Ser,seq:gct)
     gene            complement(1237..1863)
                     /locus_tag="VHX39_28875"
     CDS             complement(1237..1863)
                     /locus_tag="VHX39_28875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione binding-like protein"
                     /protein_id="HEX3995207.1"
                     /translation="MPIELHTWNTPNGRKISVALEEMGLPYSVHPVNIGKNEQFHPDF
                     LKISPNNRIPAIIDPDGPGGQPISVFESGAILIYLAEKTGKFMPSDTRAKVPVLEWLM
                     WQMGGFGPMPGQVHHFLGVENPQDQKYGLERYTKETRRLYGVLDKRLAGRDYVADACS
                     IADFAILGWAWRHERHKVDLADFPNVKTWYERCMARPGTKRGFEVALS"
     gene            complement(1986..2441)
                     /locus_tag="VHX39_28880"
     CDS             complement(1986..2441)
                     /locus_tag="VHX39_28880"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3995208.1"
                     /translation="MRNLVLNLVLTSIFGAFVVAGPVRAADTGGSTDSPDLVHARGEL
                     KAKQYAAALADLKVLVVKNPTADVYSLLGHALWKTGDPTQGMIYYNKALAMNPSHKGA
                     LEYQGELFVELGQLDKANENLARLKHLCWLGCEEASELKEAIEHAPRRK"
     gene            2772..>3573
                     /locus_tag="VHX39_28885"
     CDS             2772..>3573
                     /locus_tag="VHX39_28885"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3995209.1"
                     /translation="MIGLVRGALRRPYTAAIAAMLIIMMGGLAVTRMIVDIFPVIDIP
                     VVMVVWNYPGLTTEDMERRVVFISERAYSTTVNGIQRIESQSIPGIGMLKVYFQPGTE
                     IGASIAQITSVNNSILRIAPPGMQPPAVIQFNASNVTVAQLTMSSKTMSEQEIFDYSL
                     NFIRVRLFTIPGLSTPAPFGGKQRQIVVDLDPALLVAKGFTPTDVVNALQASNVIVPA
                     GTARIGGREYNVQLNSSPTAVERFNDLPIGVFNGTPVKIGDVARVSDSF"
BASE COUNT          686 a         1105 c         1053 g          729 t
ORIGIN      
        1 gtaatcaccc gccggtcaat cgtaacgctc cgccggatcg caagatgagg tcggccttcg
       61 ggcaaaacgc tccggtctcc gcatgcaaga ccaggcccga tgcaagccgc agcggcgagc
      121 ggccgaattt gcgtgcttgc accagcgtca gacgcgcggg cattccttgt tttggccaga
      181 tcgggaacac acactccgcc ggaaccttgc agtcccgcat cgcgatgaga gcctgctcca
      241 gcattcgcgg cggcaatatc atcgtcaacg tcccgcggtt gcggagtgga cgcgacaggg
      301 ctgccaccca ctcatttagc tgaccgggcg cagagcgttt cgcagcctcg cgcgccgatg
      361 atggcgacct cgtgccttcc accggatggt agggtggatt ggccatcgca tgatcgaatt
      421 caccgccaat gggtgacgtc gtgagatcgg cggcagcgaa cagcaatccg ggcctgccat
      481 tggctatcgc atttgcctgg gcaagcctga gcagctcggg attccgatcg acacccaggc
      541 cgcatatgtc gggaatgcgt gaagcgaggc acagcaatgc cgcgcctgcg cctgtgccgc
      601 cgtccagaac gcgttcaccc gcgcgggcgg gaaccgcggc ggcgagcaat accggatcga
      661 tcgcggcgcg gaacccatcg cgtggttgcc tgtacgagat acgcccaccc agaagatggt
      721 ctaaggtgac agcgcctggg gcacggtcag aagattgttc gcgaggcatg gggttccggg
      781 tcgtaggggc actgatggtc atgcagaccg gatgcaccat tcaagtcgtg ggttctggcg
      841 gaggggatga gattcgaact cacggtacgg gttgaccccg tacggcggtt tagcaaaccg
      901 ctgccttcag ccactcggcc acccctccgc cgggagaaga acctacccgg ggaaccccgg
      961 acacagcgtt tgcccgacca tctttaggga aacggtgcct ccgggtcaaa cgagaaccgg
     1021 cctcatcaac gccttatcgc tgccccaagg cgaaagtttt gcccaggtac cgaaagcgtt
     1081 actgcggggc aaagaaaaac cggaggcacc gtcgcacctc cggcttcatc gcaacatggc
     1141 agttgctcag tgatagacga attcgacacg gcgattccgc ggctcatggg tgtgcggatc
     1201 ggtctgcacc agcacgttct cggcgccgcc ggtcgatcag gacagcgcca cttcaaatcc
     1261 gcgctttgtt cctgggcggg ccatgcaccg ctcgtaccac gtcttcacgt tggggaagtc
     1321 cgccagatcg accttgtgcc tctcgtgccg ccaggcccag ccgaggatgg caaaatcggc
     1381 gatggagcag gcgtcggcga catagtcgcg gccggccaga cgcttatcca gaacgccata
     1441 aagccggcgc gtttctttcg tgtagcgttc cagcccgtat ttctggtcct gcggattttc
     1501 cacccccagg aaatgatgca cctgaccggg catcgggcca aacccgccca tctgccacat
     1561 cagccactcc agcaccggca ccttggcacg cgtgtctgac ggcatgaatt tgccggtctt
     1621 ctccgccagg tagatcagaa tcgcacccga ctcgaagacg ctgatcggct gtccgccggg
     1681 accatcggga tcgatgattg cggggatgcg attgttgggg ctgatcttca ggaagtcggg
     1741 atggaattgc tcgtttttgc cgatattcac cggatggacg ctgtaaggca gtcccatttc
     1801 ctccagcgcg acgctgatct tgcggccgtt gggagtgttc caggtgtgta attcgatggg
     1861 catggactgc ctgccttccg tcatgtgtca ggtttcccgg gcactttgcc ggtggtgcct
     1921 tgctgcgtcc agcgcccctc tcgggccggt aagaagccgg caaatcccgg tctgtccgta
     1981 atggatcact tccgcctggg cgcgtgctcg atggcttcct tgagttcgct tgcctcctcg
     2041 caccccagcc agcagaggtg tttcagtcgt gcaaggtttt cgttcgcttt gtcgagttgt
     2101 ccaagttcga cgaaaagctc cccctgatat tccaatgcac ctttgtgcga ggggttcatc
     2161 gccagcgctt tattgtaata aatcatgcct tgtgttggat cgccggtctt ccacagcgca
     2221 tgacccaaca ggctgtagac gtcggcggtt ggatttttaa ccaccaacac tttcaaatcg
     2281 gccagtgccg cagcgtattg cttcgcctta agctccccgc gcgcatgcac gaggtccggt
     2341 gaatcggtcg acccgccggt atcggccgcc cgcaccgggc ctgcgacaac gaaggcgcca
     2401 aagatgctgg tgagaaccaa attcagaacc aggtttcgca tgggatgact tcctccgact
     2461 aatgtggacg ggcctggcgg ctatattatt cctcatcgcg tatgctgcag tgcgcaattg
     2521 taattaccac gtttgcgtac cgaaacaaag cagcaacgtt tgcgtcgcga ttgccgattc
     2581 cgtttaaatg ttgaccaggg tcgtcatcct gacgattgcg ggcgcggcac aatcgtgcca
     2641 cggcagtcca tcccgcggga gcgacctatt cgataattgc atacctcgag attgcttcgg
     2701 ggccctctcg cttggcagac ggctgcgaag ctgtcaacga tggcaaagaa ccaaaaggcg
     2761 gggcgggatc tatgatcggt ttggtacgcg gcgcgctgcg gcggccgtac accgcggcga
     2821 ttgccgccat gctcatcatc atgatgggcg gcctcgccgt cacccgcatg atcgtcgaca
     2881 tttttccggt catcgacatt ccggtcgtca tggtggtgtg gaactatccc ggtctgacca
     2941 ccgaggacat ggaacgccgc gtcgtgttca tcagcgagcg ggcctactcg accacggtga
     3001 acggcatcca gcggattgag tcgcaatcaa ttcctggtat cggcatgctg aaggtctact
     3061 ttcagccggg gaccgagatc ggcgcctcga tcgcgcagat tacttcggtc aacaactcca
     3121 tcctgcgcat cgcgccaccc gggatgcagc cgccggcggt cattcagttc aatgcctcca
     3181 atgttaccgt cgcccagctg accatgtcgt cgaagaccat gtcggaacaa gagattttcg
     3241 actacagcct gaacttcatc cgggtccgtc tgttcaccat ccccggcctt tccactccgg
     3301 cgccgttcgg cggcaagcaa cgccaaatcg tagtcgatct ggacccggcg ctgttggtgg
     3361 ccaagggttt cacgccaacc gacgtggtca acgcgttgca agcgtccaat gtcatcgtgc
     3421 cggccggcac cgcacggatt ggcggccgcg aatacaacgt ccaactcaat tccagtccaa
     3481 ctgccgtcga gcgtttcaac gatctgccga tcggcgtgtt caacggcaca ccagtcaaaa
     3541 tcggcgacgt ggcgagggtc agcgattcct ttg
//
LOCUS       DATAVD010001503         2525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1071745, whole genome shotgun sequence.
ACCESSION   DATAVD010001503 DATAVD010000000
VERSION     DATAVD010001503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2525
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1071745"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(169..933)
                     /locus_tag="VHX39_28890"
                     /pseudo
     CDS             complement(169..933)
                     /locus_tag="VHX39_28890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003629672.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
     gene            complement(1305..>2525)
                     /gene="cysS"
                     /locus_tag="VHX39_28895"
     CDS             complement(1305..>2525)
                     /gene="cysS"
                     /locus_tag="VHX39_28895"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010506992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEX3995210.1"
                     /translation="RAVVVYDVLYRLLRHLYPKVTYVRNLTDVEDKINARAAELGISI
                     AALTEQTTGDYHQDVSALGVLAPDVEPRATGHISEMIAIIERLIASDHAYASQGHVLF
                     AVSSFADYGKFSGRNAEELLAGARIDVAPYKRDPGDFVLWKPSPPELPGWESPWGRGR
                     PGWHIECSAMSWRHLGETFDIHGGGTDLIFPHHENEIAQSLCAFPGSQFARYWVHNGM
                     LLVNGEKMAKSLGNFTTLRDALKQVPGEVIRYLLIRTHYRSTPDFSEAATIEAKKELD
                     RFYRALERCPDAGGGTVPDKVLDALCDDLNTPLAFSAMHARADAAFAGDAGAAANLRA
                     SGHLIGLLTQAPEAWFRGGTDDTDAIAAAVQERLDARKARDFARADAIRADLASRGIV
                     LEDGPGGTTWRRAL"
BASE COUNT          463 a          820 c          785 g          457 t
ORIGIN      
        1 gtgacatgct tccaggaaga tcggatcggc tgaacaatat caaccgggcg cgccgcctgg
       61 gcacaatcag aggggcgtac atggacggcg atttcccggt tcggcctgcg ggtcgaccgc
      121 ggctgtcgcc tcgactggtc cctcgcggtc aggttcgtct cgcccgcgct ggcggcggcc
      181 gatcgagagc tcggttacga tcccgtgcaa tgtccgcagt tcctgctcgg tcacctcgcc
      241 gcgttcgaag aagtgacgga tattgcggac cattccgggc cgcttcggga ggttgcgcaa
      301 aaagccgctg gcgtccagtt cggtcgtcag gtgaccgaga aaattctcca gccgggcctt
      361 attcgccacc tgggtttcat tggtcatgaa ttcgcggggc ggcgtctcgt ccgtcgccgt
      421 ccaccattca tacgccatga tcatcaccgc ctgggccagg ttcagtgaca tgaacccggg
      481 gttcagaggg tagcgaacca gtgcatcggc atgtgccatg tcgtcgttgt cgaggcccgc
      541 ccgctccggt ccaaacatca aaccggcgcg caaaccacgc gaagcgatgg cgcgcagttc
      601 ggccgcggcg ccgcgtgccg tcagcaccgg cttcacgata tggcgtggtc ttggacaggt
      661 ggccaggacg tgatgcaagt ccgcaacggc ctcggccaca ctgccataca cggtcgccgc
      721 atccaggatc cggtccgccc ccgaactgtt tgcccaggct ctttcctgcg gccaaccgtc
      781 acggggggcg acaaggcgca actcgaagag accgccgttg cccatcgctc gcgcacaggc
      841 accaatattg tcagcgagtt gaggccggac cagtacgacg gcgggggcgc cgacagccgg
      901 cagtaaggct gcgccgccct cgcgtcctgt cattgagatc cgcgcaggac cttggccgcg
      961 gcgccgaagc cggccgcgcc ggtaaccggg ccagcgtgct gcccgctcgc actccccgat
     1021 gcattcgcgt cgaaactgcc gctcgcggaa gacacaatcg gaagcgcagc tcgcgccggg
     1081 gcaaccgggg acccagcggc cctcgacgat gcctgcggaa gctgttcggt caccatcccg
     1141 aaaaccggcg agttttggac cgcttcgggt aatgggacgt ggtaaccggc aaccataacc
     1201 tgcctgtccg gggtcacggt cacctgaccg tttttcacca tcatggctgc cccgaaaccg
     1261 accaacaaga caaacagaag cttcttcatg tgaaatcctt cgcgttacag ggctcgccgc
     1321 caggttgttc cgcccggacc gtcctccagg acaatcccgc gcgaggcgag gtccgcccgg
     1381 atcgcatccg cccgagcgaa gtctcgggcc ttacgcgcat ccagacgctc ctggacagct
     1441 gccgcgatgg cgtcggtatc gtcagtgcca ccgcgaaacc aagcctcagg cgcctgagtc
     1501 agcaagccga ttaaatgtcc ggaagcccgc agatttgcgg ccgccccggc gtcacctgcg
     1561 aaggctgcat cggcccgcgc atgcatcgcc gagaacgcaa gcggggtgtt caggtcgtcg
     1621 cataaggcat ccagcacctt atcgggcacg gttcctccgc cagcgtccgg gcatcgttca
     1681 agcgcacgat aaaatcgatc cagttccttt ttcgcttcaa ttgtcgctgc ctcactgaaa
     1741 tccggtgtcg agcggtaatg ggtgcggatc agcaaatacc gaatgacctc gccgggcacc
     1801 tgcttcaagg catcgcgcag ggttgtgaaa ttgcccagtg atttggccat tttctcgccg
     1861 ttgacgagca gcatgccgtt atggacccag tagcgcgcga attggctgcc tggaaacgcg
     1921 cacaggctct gcgcgatctc gttttcgtga tgcgggaaga tcaggtcggt accgccgccg
     1981 tggatgtcga aagtttcccc gagatggcgc caggacatgg cggagcactc gatgtgccag
     2041 ccaggccggc cgcggcccca ggggctttcc cagccaggca gttccggcgg tgacggcttc
     2101 cacagcacga agtcgccagg gtctctctta taaggtgcaa catcgatccg ggcgcctgcc
     2161 agcaactcct cggcgttgcg tccggagaat tttccgtaat cggcgaagct gctcactgca
     2221 aacagcacgt ggccttgcga cgcataagcg tgatcggagg cgatcaggcg ttcgatgatc
     2281 gcgatcatct cgctgatgtg gcccgtcgca cgcggttcga catccggggc cagtacgccc
     2341 agagcagaga cgtcctggtg gtaatcgccg gtggtctgct ccgtgagagc agcgatcgag
     2401 atgccgagtt cggccgcccg cgcattgatc ttgtcctcta cgtccgtgag gttccggaca
     2461 taggtgacct tgggatacag gtggcgcagc agccggtaca gcacgtcgta aacgacgacc
     2521 gcgcg
//
LOCUS       DATAVD010001504         3238 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3303913, whole genome shotgun sequence.
ACCESSION   DATAVD010001504 DATAVD010000000
VERSION     DATAVD010001504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3238
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3303913"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..942
                     /locus_tag="VHX39_28900"
     CDS             <1..942
                     /locus_tag="VHX39_28900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HEX3995211.1"
                     /translation="ARFDEEANINLARTMEAAGVQVVFGFTELKTHAKLSLVVRREAG
                     AIRSYAHFGTGNYHPITARIYTDLSFFTCDPALTRDAARLFNFMTGYAKPEAMEAIAF
                     SPILTRNVLLDLIAGEAKFARAGKPATIWLKMNSLVDAKLIDALYDASRAGVKVMAVV
                     RGICCLRPGIPGLSDNIRVKSIVGRFLEHSRIYAFGNGYVLPGRHAKVYISSADWMER
                     NMDWRVETLVPISNPTVHEQVLDQIMAVNLRDSLQSWELRSDGSWKRVPVGRRPMSAH
                     DYFMTNPSLSGRGSALHGQIVVSPLAAHRRVDRMSQD"
     gene            946..2481
                     /locus_tag="VHX39_28905"
     CDS             946..2481
                     /locus_tag="VHX39_28905"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006793 - phosphorus metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HEX3995212.1"
                     /translation="MPFTPRAGLPRCAVVDLGSNSVRLVVYEGLGRNPMSIFNEKAVL
                     RLGRGLQATGLLDPDGMAQAMTILHRYRAVALAMGAHPIEILATAAVRDALNGSDFVK
                     QVQARMPDVPIRILSGVEEAELSSEGLLCGIPEADGVLADIGGGSLELVRLDDGKGGT
                     ALTLPLGVIRLSEQSAGDPTSARLIVEGAFRAIGWLNEIAGRDLYLVGGAWRALARID
                     MARTDYSLRMVHHYTIGRDEARDLCARILSASNRELAQLAGISRRRVEDLPFAAVVLR
                     RLVRMSGARRVVFSASGLREGWLMRLVPPEVRGRDALLAAGHDLAELYGRDPTLPPAL
                     LAWTAPLFPQETTAAARLREAACWMSDVGSHDHPEFRPEQAFLRILRQPGIGLDHPSR
                     AYLALTIALRYEADSGAPFLIPVRRLLDPMTAKRAEILGMALRLAYTLSAGTPDLLAG
                     TRLRVDGRRLVLSLAQGTGVFAGEAVVRRLTRLAQALDLEAATETMARQVVAERSGRK
                     AVA"
     gene            2627..3109
                     /locus_tag="VHX39_28910"
     CDS             2627..3109
                     /locus_tag="VHX39_28910"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3995213.1"
                     /translation="MSNETPNSRQPAIRIACAADAASVHAIVDAAYRSYIPRIGKPPG
                     PMLDNYAQRIADGQVWILADTSGIVGILVLEETADGLLLDNIAVAPGQQGKGHGRTLL
                     EFAETQAKRRGWNEIQLYTNALMTENIALYHRIGYLETVRVTEKGFDRVYMVKQLTAP
                     "
BASE COUNT          558 a          929 c         1086 g          665 t
ORIGIN      
        1 gcccggttcg acgaggaagc caacatcaac ctcgcacgta ccatggaggc agccggtgtg
       61 caggtggtgt tcgggttcac cgaactgaaa acgcatgcga aactttccct cgtcgtacgg
      121 cgagaggccg gtgccatccg ctcctatgcg catttcggca ccggcaatta ccacccgatc
      181 acggcgcgca tctataccga cctgagcttc tttacctgcg atccggcgct gacccgcgat
      241 gcagcccggc tgttcaattt catgacgggt tatgcgaaac cggaagcgat ggaggcgatc
      301 gcattcagcc caatcctgac tcgtaacgtg ctgttagatc tgattgcagg cgaggcgaag
      361 tttgctcgtg ccggcaagcc cgcaaccatt tggttaaaga tgaacagtct cgttgacgca
      421 aagttaatcg atgcgctgta tgacgcctcg cgcgcgggcg taaaagtcat ggccgtggtt
      481 cgcgggatct gttgtctacg ccctggtatt ccgggtcttt cagacaacat acgtgtgaag
      541 tcgatcgtcg gccggtttct ggagcacagc cggatttatg cgttcggcaa tggttacgtg
      601 ctgccgggac ggcacgccaa agtttacatc agctcggccg actggatgga acgcaacatg
      661 gattggcgcg ttgaaacttt ggtgccgatt tccaatccaa cggtgcatga gcaggtgttg
      721 gaccagatta tggcggtcaa cctgcgtgat tcgctgcaat cgtgggaact tcgctccgac
      781 ggttcgtgga agcgcgttcc ggtggggcgc cggccgatgt cggcacacga ttactttatg
      841 accaatccgt cgttgtccgg gcgaggctcg gcgttgcatg gccagattgt cgtgtcgcct
      901 ttggctgcgc atcggcgtgt ggatcgcatg agtcaggatt aagtcatgcc atttacgcca
      961 agagccggtt tgccgcgctg cgccgtggtg gaccttgggt cgaattcggt tcgcctcgtg
     1021 gtttacgagg ggctcggccg taatccgatg tcgatcttca acgaaaaggc ggtgctgcga
     1081 ttggggcgcg gcttgcaggc gaccggattg ctcgatccgg acggcatggc gcaggcaatg
     1141 acgatcctgc atcggtatcg tgcggtcgcg ctggcgatgg gggcgcatcc gatcgagatc
     1201 ctggcaacgg ccgcggtgcg cgatgcactc aacgggtccg atttcgtgaa gcaggtccag
     1261 gcccgcatgc ccgatgtgcc gatccgtatc ctgtccggtg tcgaggaggc cgagctgtcg
     1321 tctgagggtc tgctgtgcgg cattcccgag gcggatggcg tgctggccga tatcggcggc
     1381 ggctcgctcg aactcgtccg cctggacgat ggtaagggcg gcacggcgct gaccttgccg
     1441 ttgggcgtca tccggttatc ggaacaatcc gctggcgatc caacgagcgc gcggctgatc
     1501 gttgagggcg cctttcgcgc gatcggctgg cttaacgaaa tcgccggccg cgatctttat
     1561 cttgtgggtg gtgcctggcg ggcgctcgcc cggatcgata tggcgcgcac cgattacagc
     1621 ctgcggatgg tgcatcatta cacgatcggg cgcgatgagg cgcgcgatct ctgtgcacgc
     1681 attctgagcg cgtccaatcg cgaactcgct cagctggcgg gcatctcgcg gcgccgggtg
     1741 gaggatttgc cgtttgctgc cgtcgtgctg cggcgtctgg tgcgcatgag cggtgcgcgc
     1801 cgggtggtgt tcagcgccag cggcctgcgc gaggggtggc tgatgcgtct cgtgccgccc
     1861 gaggtgcgcg gtcgcgacgc gttgcttgcc gccggccacg acctggcgga gttgtatggt
     1921 cgcgatccga ctctgccgcc ggcgttgctg gcctggacag cgccgctgtt tccgcaggag
     1981 acgaccgcgg cggctcggtt gcgcgaggcg gcttgctgga tgtcagacgt cggcagtcac
     2041 gatcaccccg aattccgccc ggagcaggcg tttctgagga tcctgcggca gccgggtatc
     2101 gggcttgacc atccgtcccg ggcctatttg gcactgacga tcgcgttgcg ttacgaggcg
     2161 gattcggggg cgccgttcct gatacccgta cgccgcctgc tggatccgat gacggccaaa
     2221 cgcgctgaaa ttctgggtat ggcgttgcgg ctggcgtaca cgctgtcggc cggcacgccg
     2281 gatcttctcg ccggcacacg attgcgcgtg gatggacgcc ggctggtgtt gagtttggcg
     2341 caaggcaccg gagtgttcgc cggtgaagcg gtggtgcgcc ggttgacccg tctggcgcag
     2401 gctctggacc tcgaagccgc gactgagacc atggcgcggc aggttgtcgc cgaacgatcc
     2461 ggacgtaagg cggtcgcgta gtcccctcgg gtcattgcga ggagcgaggc ggcgcggcaa
     2521 gttcgcgcgg gctgtgcacc gacggtgaga ttgcttcgcc tcgccggcat tgaccggagg
     2581 caccgtggct cgcgcatccc gccagtggat ttcagccggt gaccagatga gcaacgaaac
     2641 accgaattca cgtcagccgg ccatccgaat cgcttgcgcc gcagatgccg cttccgtgca
     2701 tgcgatcgtt gatgccgcct accggtctta tatcccgcgt atcggcaagc cgccgggacc
     2761 aatgctcgac aattatgcgc aacgaatcgc cgatgggcag gtctggatat tggcagatac
     2821 cagcggtatc gttggtatcc tggtgctgga ggaaacagcg gacggattgc tgctcgacaa
     2881 tatcgcagtt gcgccgggcc aacagggtaa aggccatgga cgcacgctgc tcgagttcgc
     2941 cgaaacccag gcgaagcggc gcggatggaa tgaaattcag ttgtatacca acgcgctgat
     3001 gacggagaat atcgcgcttt accaccggat tggctatctg gagaccgtgc gcgtgaccga
     3061 gaaaggcttc gatcgggtct acatggtgaa gcagcttacc gcaccgtgag gctgtcatcg
     3121 caacttttgt ggaggaacca aagcaatgcc tgaactggag attatcgggg cgccacaaag
     3181 taacttcgtt cgcaccgtgc gcatggcctg cgcagaaaaa tcggtgccct acacgctg
//
LOCUS       DATAVD010001505         1960 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_702683, whole genome shotgun sequence.
ACCESSION   DATAVD010001505 DATAVD010000000
VERSION     DATAVD010001505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_702683"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..507
                     /locus_tag="VHX39_28915"
     CDS             <1..507
                     /locus_tag="VHX39_28915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004272430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HEX3995214.1"
                     /translation="WKKAVADNYLSSIAFFCSGSNYSYRDNYLDLDPTYKDHLGRPLM
                     RMTFDFHPNEVKMSAFLTDRAAEIMQKTNPRQMVKHPRTAPYSSVPYQTTHTCGGAIM
                     GTDPKTSALNRYLQSWDVPNLFVMGASAFPQNAGYNPTDTVAAIAYWSAKAIREQYLK
                     HPGPLVQA"
     gene            504..1760
                     /locus_tag="VHX39_28920"
     CDS             504..1760
                     /locus_tag="VHX39_28920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX3995215.1"
                     /translation="MTFHRIGCSLAAFALTVTLAANAAGQPAAPDPQDFSQIAHGRYV
                     AVLGDCAACHTNPGGPPFAGGLAIETPFGNVIAANITPDRDTGIGGWTDEQFIRALTK
                     GRAPGGVRLYPAMPYPAYAKMTKQDLSALKAYLNTLNPVHNRVQSDQLPFPFDIRFGM
                     LFWNSLFYASGTFKPDPHQSAEWNRGAYLVEGPGHCGTCHTAKNFLGGDESGQFLRGY
                     SIQGWFAPNITGNDRVGIGSWSIEDIAAYLKTGVNGHSIASGPMADEVEDSSSHMTAM
                     DLRAIAAFLKSQPAGSDQPGQAMAANDPVMQAGGSIYTDECSACHTPGGAGVARLFPT
                     LKGSPLVQSAEPTSLIHVVLEGGRAVATDPAPTAPAMPPFAWKLSDRQVADVVTYIRN
                     AWGNHASPVTTGNVRTAREALASHTP"
BASE COUNT          395 a          633 c          583 g          349 t
ORIGIN      
        1 tggaagaagg cagtggcaga caactatctc tcgtcgatcg ccttcttctg ctccggcagt
       61 aactacagct accgtgacaa ctacctggat ctcgacccga cctacaagga tcatctcggc
      121 cggccgctga tgcggatgac gttcgacttc catcccaacg aagtgaagat gagtgcgttc
      181 ctgaccgacc gcgcggccga gatcatgcag aagacgaacc cgcgacagat ggtgaagcat
      241 ccgcgcactg ccccttacag cagcgttccc taccagacca cgcatacctg cggcggcgcg
      301 atcatgggga ccgaccccaa aaccagtgcc ctcaatcgct atctgcaaag ctgggacgtg
      361 cccaacctgt tcgtgatggg cgcaagtgcc tttccccaga acgccggata caacccgacc
      421 gatacggttg ccgcgatcgc atactggtcc gccaaggcga tccgcgagca atacctcaag
      481 caccccggcc cactggtgca ggcatgacgt tccatcgcat tggatgcagc ctggcggcct
      541 tcgcgctgac cgtcacgctc gcggctaatg cagctgggca gccggcggca ccggatccgc
      601 aggatttcag ccagatcgcg catgggcgct acgtggcggt gctgggtgac tgcgcggcct
      661 gccataccaa tccgggcggt ccaccctttg caggcggact ggcgatcgaa acaccgttcg
      721 gaaatgtgat tgccgccaat atcacgcccg accgtgacac cggcatcggt ggctggacag
      781 atgagcaatt cattcgcgcc ttgacgaaag gacgcgcgcc cgggggcgtg cggctgtatc
      841 cggcaatgcc ctaccccgct tatgccaaaa tgaccaagca ggacctgagc gcgctcaagg
      901 cgtatcttaa cacgttgaat ccggtgcata atcgagtcca aagcgaccag cttccgttcc
      961 cgttcgatat ccggttcggc atgctcttct ggaattcgct gttctacgca tccgggacgt
     1021 tcaagccgga tccgcatcaa tccgcggaat ggaaccgcgg cgcctatctg gtcgagggac
     1081 cggggcattg cgggacctgc catacagcga agaatttcct cggcggcgac gaaagtgggc
     1141 agttcctgcg cggctattcc atccagggat ggtttgcgcc gaacatcacc ggcaacgacc
     1201 gtgtcggaat cggttcgtgg tcgatcgaag acatcgccgc ctatctcaag accggggtga
     1261 atgggcactc catcgcgtcg gggccgatgg ccgatgaagt tgaggattca tcgtcgcata
     1321 tgacagcgat ggatctgcga gcgatcgccg cgttcctcaa aagccagcct gcgggcagcg
     1381 atcagccggg tcaggcaatg gcggccaatg atcccgtcat gcaagccggc ggctccatct
     1441 acaccgacga atgttcggcg tgccacaccc cagggggcgc cggcgtcgcc aggctctttc
     1501 caacactgaa aggcagcccc ctggtacagt cggcggagcc gacctcgctc attcatgtcg
     1561 tgcttgaggg cggccgggcc gtcgcgaccg atcctgcccc caccgcgccg gcgatgccgc
     1621 cattcgcctg gaaattgtca gaccggcagg tcgccgacgt ggtgacttat atccgcaacg
     1681 cctggggcaa ccatgcgtcg ccggtgacca caggaaatgt caggacggcg cgcgaggcgc
     1741 tggcgagcca tacgccgtag agccatcgga tcaggcttgg aaaatgattt cagtcggaac
     1801 ggatcacgaa ggcggccgcc cgcatcttcg gacagtccgc caccgcggag tctaaatttc
     1861 tctcatccag gagatcccgg cggaaagggc gatcggtgag ctgcaaaccc tatagttcac
     1921 cctcccggca ctgcgcgcct ctcgcgttgg ccttgtccgg
//
LOCUS       DATAVD010001506         2098 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_147626, whole genome shotgun sequence.
ACCESSION   DATAVD010001506 DATAVD010000000
VERSION     DATAVD010001506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147626"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..623)
                     /locus_tag="VHX39_28925"
     CDS             complement(<1..623)
                     /locus_tag="VHX39_28925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007398257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3995216.1"
                     /translation="MKADTAPLLALDDVRKTYRLRRSLWDRMRGRVQDVNAVDGVSIQ
                     VAQGSILGLVGESGCGKSTLARMMVGLTQPSGGEILWAGTALPDLRGDAWRAYRAGVQ
                     MVFQDTHSSLNPRKRIRTILGEAVAANGDPRTARDEQVSGLLRQVGIDAQFLGRYPHE
                     LSGGQRQRIGIARALAMRPSLLVADEPVSSLDVSLQGQIINLLRELNA"
     gene            complement(620..1591)
                     /locus_tag="VHX39_28930"
     CDS             complement(620..1591)
                     /locus_tag="VHX39_28930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3995217.1"
                     /translation="MTEPLLRIEGLHVGFRTGTTFRNVVRGVDLRVDPGEVVGLVGES
                     GSGKSITALAVMRLLPPGAAITSGRISFRGQDMLGIGNREMNRLRGGAMGMIFQDPLT
                     ALNPAIPIGGQLTDAIRAHQPLSRNAARDRAEELLALVGIPFPKQRLRAYPHELSGGM
                     RQRVMIALAVSSNPSLLIADEPTTALDVTVQAQVMELIDRIRREIHIAVLFISHNLEL
                     VAEIADRVTVMYAGRAVESGDVADLFARPFHPYTRQLIRCIPRLDGRVGELPTIPGLP
                     PLVGALPPGCPFAPRCEVADERCGIEEPPMRWHGQHMAACFRAEAMS"
     gene            complement(1588..>2098)
                     /locus_tag="VHX39_28935"
     CDS             complement(1588..>2098)
                     /locus_tag="VHX39_28935"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3995218.1"
                     /translation="WAIALVGILGVSPVHIGGLQFGNEVKLLCLLGLLYIPTLARITY
                     TSALGEAGANYVAARRLQGVSGVRIMLSDVLPNCLSPVIVQATLLLAIGIVIEASVSF
                     VGLGVQVPLASWGNMLADARNYLFSGEWWLSAFPGAAISLSVIAINLVGDGLRDALDP
                     RHSTSALAA"
BASE COUNT          404 a          701 c          668 g          325 t
ORIGIN      
        1 gcgttgagct cacgcagcag gttgatgatc tgtccctgca acgaaacgtc gagcgaggac
       61 accggctcat ccgccaccag cagcgacggc cgcatcgcca gagcgcgggc aatgccgata
      121 cgctgacgct gaccaccgga cagctcgtgc ggatatcggc cgaggaattg cgcatcgatc
      181 ccgacctggc gcagcaaccc ggagacctgc tcgtcccgcg ccgtccgcgg gtccccgttc
      241 gcggccaccg cctcgccaag aattgtccgg atgcgcttgc gcggattgag cgaggaatgg
      301 gtgtcctgaa acaccatctg cacccccgcc cgatacgcgc gccacgcatc gcctcggaga
      361 tcgggtaacg ctgtaccagc ccagaggatt tccccgccgg agggctgcgt caggccgacc
      421 atcatgcggg caagggtgga tttgccgcac ccgctctcgc ccaccagtcc caggatggag
      481 ccctgagcga cctggattga gacgccgtca acggcgttca cgtcctgcac gcggccgcgc
      541 attcggtccc acaggctgcg gcgcaggcgg taagtctttc gaacgtcgtc cagcgccagc
      601 agaggcgcgg tgtcggcttt catgacatgg cctcggctcg gaagcaggcg gccatatgtt
      661 ggccgtgcca acgcatcggc ggttcctcaa tcccgcagcg ctcgtccgcg acctcgcagc
      721 ggggtgcgaa ggggcaacca gggggcagcg ctccgaccag gggcggtaaa cccggaatgg
      781 tcggcaattc gcccactcga ccgtccagcc gcgggatgca gcggataagt tgccgcgtgt
      841 acgggtggaa cggccgcgcg aacagatccg cgacatcgcc actttcgacc gctcggccgg
      901 cgtacatgac ggtgacccga tcggcgatct cggctaccag ctccagattg tggctgatga
      961 acagaaccgc gatgtggatt tcgcggcgaa tacgatcgat cagctccatc acctgcgcct
     1021 gcaccgtcac atccagcgcc gtggtcggtt cgtcggcaat cagcaggctc gggttggacg
     1081 acaccgccag agcgatcatc acccgctggc gcatgccacc cgacaattcg tgcgggtagg
     1141 cgcgcaggcg ttgttttgga aatggaatac cgacaagcgc cagcagttcc tcggcccgat
     1201 cgcgcgccgc attgcggctc aacggttggt gggcgcggat cgcatcggtc agttggccgc
     1261 cgatcgggat ggccggattc aacgcggtca gcggatcctg gaatatcatt cccattgcgc
     1321 cgccacgcag ccggttcatt tcgcggttgc cgatgccgag catgtcctgg ccgcgaaatg
     1381 aaatccgtcc gctggtgatc gcagcacccg gcggcaacag gcgcatgaca gccaaagcgg
     1441 tgatactttt gccggaaccg gactcgccca ccagccccac gacctctccc ggatcaacgc
     1501 gcagatcaac gccgcgcacg acgtttcgaa atgtggtccc ggtgcgaaag ccgacatgca
     1561 aaccctcgat gcgcagcagg ggttcggtca tgcggccagc gccgacgtgc tgtgccgcgg
     1621 atcgagcgca tcgcgcagcc cgtcgcccac aagattgatg gcaatgacac tgagggaaat
     1681 ggcggcgcca gggaatgccg acagccacca ctcgccgctg aacaggtaat tgcgtgcgtc
     1741 ggccagcatg ttaccccagc tcgccagcgg cacttgcacg cccagtccga cgaaactgac
     1801 ggaggcctcg atgacgatgc cgatggccag cagcaatgtg gcctgcacga tgaccggcga
     1861 gaggcagttc ggcagcacgt ccgacagcat gatccgcacg ccgctgacac cttgcagacg
     1921 gcgcgccgcg acatagttgg cacccgcctc gcccagagcg gacgtgtagg tgatgcgggc
     1981 cagcgtcggg atgtacagca ggccaagcag gcaaagcagc ttgacctcgt tgccgaactg
     2041 aagtccgccg atatgcacgg gactgacacc caggatgccg accagggcga tggcccag
//
LOCUS       DATAVD010001507         3888 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_328708, whole genome shotgun sequence.
ACCESSION   DATAVD010001507 DATAVD010000000
VERSION     DATAVD010001507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3888
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_328708"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..828
                     /locus_tag="VHX39_28940"
     CDS             <1..828
                     /locus_tag="VHX39_28940"
                     /inference="COORDINATES: protein motif:HMM:NF015214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase C-terminal
                     domain-containing protein"
                     /protein_id="HEX3995219.1"
                     /translation="LPEDGDKFAVSFCIPMATPGLKFICRDSVAGTDNVFDHPLSSRF
                     DEQDAFLIFDDVEVPRDRLFIDANVKVYNQAMTRSWHSNVMQQTMVRAATKLEFAWGL
                     ATALAEAINDKSPAAQQMLGELWCYAELARCAVQTAEDHCNEWGNGVWFPDGPPLMAL
                     KAMMPFWMPRANEIIKLLGSHNLLATPTWQMMQNPDLRPFIDKYLHGAGELDAERRIR
                     LFRLAWDYAGTALASRVELYERFYLTSGARNQQRAQGMAKRDGALALVERFLTEKVD"
     gene            894..1631
                     /locus_tag="VHX39_28945"
     CDS             894..1631
                     /locus_tag="VHX39_28945"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX3995220.1"
                     /translation="MIEQTLDIATRDGAMETFIVHPDQGAHPTVLLLMDAPGVREELR
                     DMARRLATVGYFVMLPNLYYRAGRDTIYGPDVLTKGSAEQARMRAVRTKMTIPPVMDD
                     VAAMIGFADRQAAAKPGPVGTHGYCMSGPYSLAAASRYPDRIAAAASFYGTWLVSENE
                     ESPHLNLGKAKGELYIGCAEHDELAPLPMVEELKSLFEKSGNPGALEMYPGVHHGFAF
                     PQRWCYDQPAAERHWERLIALYRRRLG"
     gene            1639..2814
                     /locus_tag="VHX39_28950"
     CDS             1639..2814
                     /locus_tag="VHX39_28950"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3995221.1"
                     /translation="MELWNHCENPYPFVPAEVLDAAPSVRASLPNKYCEPEIAARLYD
                     EVFAEYQHCDDIGLHIVTNEHHSGINNLWAASPVITGVVARLTSKVRILSLGTLITVR
                     PDPVRVATEYATIDVLSRGRLDIGFVKSGATEMTSGDANPMRIREREWEAIDLIEKAL
                     TSHDGPFSWEGKFFSHAHVNIWPRPYQSPRPEFWAATSDLPTCAELGRRNFINTLLFG
                     GYDRTRTAFNTYKQARAAAGMPAAGEDRFSYMAFCYVGDTDEEAIRIGQKIPWFLTVS
                     IKSAPQMSKFMPGQIAPEMTPAAWRAGASKRPTDLSVESLVRQGQMFCGNPDTVVRQI
                     KDFRNRVGGVGRIIMMTRQGLVTHAEAMKSFTLASKEVLPKLQDLAPVDLDMPTAAQ"
     gene            2811..3614
                     /locus_tag="VHX39_28955"
     CDS             2811..3614
                     /locus_tag="VHX39_28955"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3995222.1"
                     /translation="MTLRRVGPFEVATLRVGAGPPALLIHGVNPIHPAAPFLAKLAAH
                     VEVIAPSHPGFGASPLPPDFDTMYDLMQLYLAILDSIPADDVTVIGFSFGGWIAAELA
                     VTNPKRLGRLILVDPVGIKLGGREDRDIAHFFNTDPNELNRRSWHDPARRPSGIYGLG
                     WQATVSETMTDDEMISFARNWDSLCLYAWKPHMYNPQLKHWLHRIGVPTKLIWGEFDR
                     IVTPDYGRAYAGLIPGAEFSIIPDAGHHPELEQPDPFVTAVAEFLRPQP"
     gene            3611..>3888
                     /locus_tag="VHX39_28960"
     CDS             3611..>3888
                     /locus_tag="VHX39_28960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995223.1"
                     /translation="MMFIIRTGGEQPTGTGFAIRLTRRTPALVAGGTRDYFCDGDPDT
                     AKAQHLNVVPVHDGWYADDTGGGVAIWGQGRFWEIRDTPFTVRETSAQG"
BASE COUNT          777 a         1118 c         1198 g          795 t
ORIGIN      
        1 ctgccggagg atggcgacaa attcgcggtc tcgttctgta ttccgatggc cacacccggc
       61 ctgaaattca tctgccgcga cagtgtcgcc ggcaccgaca acgtgttcga tcatccgctt
      121 tcatcgcgtt tcgatgagca agatgcgttc ctgatcttcg acgatgtcga ggtgccgagg
      181 gacaggttat tcatcgacgc caacgtcaag gtttacaacc aggcgatgac ccgaagctgg
      241 cattccaacg tcatgcagca gacgatggtt cgcgccgcaa ccaagctgga gttcgcctgg
      301 ggcttggcga ccgcactggc cgaggcgatc aacgacaaaa gtccggcagc gcaacaaatg
      361 ttgggcgagc tgtggtgcta tgccgagctc gcccggtgtg ccgtgcagac ggctgaggat
      421 cattgcaacg aatggggcaa tggcgtgtgg tttcccgatg gtccgccgct tatggcgctg
      481 aaggcaatga tgcctttctg gatgccgcgt gccaacgaga tcatcaagct gctggggtcg
      541 cataacctgc tggcgacgcc gacctggcag atgatgcaga acccggacct ccggccgttc
      601 atcgacaaat atttgcatgg cgcgggcgaa ctcgatgcgg agcgccgcat ccggttgttc
      661 cgcctggcgt gggactatgc cggcactgcg ttggcatcgc gggtggaact ttatgagcgg
      721 ttctacctga catctggcgc gcgcaatcag cagcgagccc agggaatggc gaagcgggat
      781 ggtgcgctcg cgctggtgga gcggtttctg actgagaagg tggactgaag gcgccttgcc
      841 ggatcatcgg cgaagtggaa tcctgccggt gggaaaagtt caggagagat cggatgatcg
      901 aacagacgct ggatatcgcc accagggatg gagcgatgga aacgttcatt gtgcatccgg
      961 atcaaggagc tcatccgacg gtgctgcttt tgatggatgc tccgggagtc cgcgaagaat
     1021 tgcgcgatat ggcccggcgg ctcgccacgg ttggctattt cgtcatgctg ccaaatcttt
     1081 attaccgcgc aggccgcgac acgatttacg gtccggatgt attgaccaaa gggagtgccg
     1141 agcaggcccg catgcgcgcc gtgcgtacca aaatgaccat tccgccagtg atggacgatg
     1201 tcgctgcaat gattggcttc gccgaccgtc aggcggctgc aaagcccggc ccggtcggca
     1261 ctcatggtta ttgcatgagc ggtccttact cgctcgctgc tgcctcgcgg tatccggatc
     1321 gcattgcggc tgctgcatca ttttacggca cctggctggt gtcggagaat gaagaaagtc
     1381 cccatctcaa tcttggcaag gcaaaagggg aactctatat cggctgcgct gagcacgatg
     1441 aattggcacc gttgccgatg gtggaagaac tcaagagctt gtttgagaaa tccggcaatc
     1501 cgggcgcgct ggaaatgtat ccgggcgtgc accacgggtt cgctttcccg caacgctggt
     1561 gttacgacca gccggccgct gaacgccatt gggaacgcct gatcgcactt tatcgccgcc
     1621 ggctgggatg atgtgacgat ggaactgtgg aaccactgcg agaacccgta tccattcgtg
     1681 ccggcggagg tgttggacgc cgccccttcg gtgcgcgcca gtctgccgaa caaatattgt
     1741 gagccggaga ttgctgcccg tctctacgat gaagtgttcg ccgaatatca acattgtgat
     1801 gatatcggct tgcatatcgt caccaacgaa catcactccg ggatcaacaa tctctgggct
     1861 gcaagtccgg ttatcactgg cgtcgtggcg cggctgacca gcaaagttcg cattctgtcg
     1921 cttggtacgc tgatcaccgt gcggccggat ccggtgcgag tggcgaccga atatgcgacg
     1981 attgatgtac tctcccgcgg gcgattggat atcggttttg taaaatccgg ggccaccgaa
     2041 atgacttccg gagacgccaa cccgatgcgc atccgcgaac gcgaatggga ggcgatcgat
     2101 ctgattgaga aagctctgac gtcgcatgac ggaccgttca gttgggaggg caaattcttt
     2161 tcccatgctc acgtgaacat ctggccgcgt ccctaccaat cgcctcgccc cgaattttgg
     2221 gctgcgacct ccgatctccc cacctgtgcc gaactgggcc gtcgcaactt catcaataca
     2281 ctgttgtttg gcgggtatga ccgcacgcgc actgcgttca atacctacaa acaggcacgc
     2341 gcggcggctg ggatgccggc agcaggcgag gaccgttttt cctatatggc attttgctac
     2401 gtcggcgata cggatgaaga agcgatccgg atcggtcaga agatcccctg gttcctgacc
     2461 gtcagtatca aaagtgcgcc gcagatgtcg aagttcatgc cgggccaaat tgcgcccgaa
     2521 atgacgcccg ccgcgtggcg cgccggcgcg tccaaacggc cgaccgatct ttcggtggaa
     2581 agcctggtgc ggcagggcca gatgttctgc ggcaatccag ataccgtggt gcgccagatc
     2641 aaggactttc gcaaccgggt cggcggggtt ggccgcatta tcatgatgac tcgtcaaggt
     2701 ctcgtgaccc atgccgaggc gatgaaaagt ttcacgctgg catcgaagga agtgctaccg
     2761 aaattgcagg acctcgctcc ggtggatctc gacatgccga cggcggcgca atgaccttgc
     2821 gccgcgtggg accgttcgaa gttgcgacac tgcgagtagg cgccggcccg cccgctttgc
     2881 tgatccatgg tgtcaatccg atccaccctg ccgcgccgtt tcttgcaaag ctcgcggctc
     2941 atgtcgaggt gattgccccg tcgcatcccg gctttggcgc ctcacctctg ccgccggatt
     3001 tcgatacaat gtacgatctg atgcagcttt atctggcgat tctcgacagc attccggcag
     3061 acgacgtgac agtgatcgga ttttccttcg gcggctggat cgcggccgaa ctcgcggtga
     3121 cgaacccgaa acgtctcggc cgtctgatcc tggtcgatcc ggtcggtatc aagctcggtg
     3181 gccgggaaga ccgcgacatc gcgcatttct tcaataccga cccgaacgag ctcaatcggc
     3241 gaagctggca cgacccggcg cggcggccat cggggattta tggtcttggt tggcaggcga
     3301 cggtcagcga gacgatgacc gatgacgaga tgatttcgtt tgccaggaac tgggactcgc
     3361 tgtgcctgta tgcgtggaag ccgcacatgt acaacccgca attaaagcat tggctgcatc
     3421 ggatcggcgt tccgacaaag ctgatctggg gcgagttcga ccgtatcgtc accccggact
     3481 acggccgcgc ctatgctggt ttgatcccgg gtgccgaatt cagcatcatc cccgacgccg
     3541 gccatcaccc ggaactggag caaccggacc cattcgtgac cgcggttgca gaatttctga
     3601 ggccacagcc atgatgttca tcattcgcac gggcggcgaa cagccaaccg ggaccggttt
     3661 tgccatccgg ttgacacggc gcacgccggc tctggtcgcc ggtggaacgc gagattattt
     3721 ctgcgacggc gaccctgaca cggcaaaagc acaacaccta aacgtcgtgc ccgtgcatga
     3781 cggctggtat gccgacgaca ccggcggcgg agtggcaatc tggggccagg gacggttctg
     3841 ggaaatccgt gacacaccgt tcacggtgcg ggagacatct gcacaagg
//
LOCUS       DATAVD010001508         2642 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1072488, whole genome shotgun sequence.
ACCESSION   DATAVD010001508 DATAVD010000000
VERSION     DATAVD010001508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2642
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1072488"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..403
                     /locus_tag="VHX39_28965"
     CDS             <1..403
                     /locus_tag="VHX39_28965"
                     /inference="COORDINATES: protein motif:HMM:NF015682.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HEX3995224.1"
                     /translation="GRLAARGCSGIVTDGGLRDSEGILKTGLPAYHRRPTSPPSPIVH
                     QPYDIGLPIACGGVAVYPGDVIVGDCDGVVVIPADLVEEIAAEAAAQTLFDEFAEAEV
                     KKGRSLIGLFPAQNDQCKADFAAWKKERGVE"
     gene            complement(406..1251)
                     /locus_tag="VHX39_28970"
     CDS             complement(406..1251)
                     /locus_tag="VHX39_28970"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03619 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEX3995225.1"
                     /translation="MQYGAGFPLQALPDAAAIRAYATALEDAGFDFTGTAGHVLGQPA
                     GTHPDRAAPQYVGPFNDPFVTFSYLAGVTQRIRFMSAILILPALPTGLVAKQAAELAL
                     VSGGRFELGVGISWNAAEYHALGQDPRTRAARLEEQVTVLRRLWSEPYVTFKGRFHDF
                     ENVGLVRPAAIPIWFGTGTDEPVLRRVARLADGWMTIGDFLPHVPRFQQYLRDSGREP
                     AGFPIRASLVAGDGGPAAWIETGRKYQAAGVTHITIGAPPALTSTQALERLAAARAAL
                     AQALG"
     gene            complement(1254..2345)
                     /locus_tag="VHX39_28975"
     CDS             complement(1254..2345)
                     /locus_tag="VHX39_28975"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent alcohol dehydrogenase"
                     /protein_id="HEX3995226.1"
                     /translation="MRAAVFHAPHQPLTIEDVEIEKPKRREILLRTAYAGLCHSDLHF
                     MEGLYPYPAPAVLGHEGAAVVEAVGEDVTYVKPGDHVITCLSVFCGECDYCTTGHTNL
                     CDNTEVKLLPGAARRLKWKGQTLNQAFNLSAFAENMLVHEHAVVKINKDIPLDRAALV
                     GCGVMTGVGAVFNAAKVEPGSTVAVVGCGGIGLSAVNGAALAGASKIIAIDTNPAKLE
                     KAREMGATDTINASNVDPVAAVKDMTNGHGVPYSFEAIGLKATAEQCFAMLRPGGVAT
                     IIGMIPFGTKIELHGADFLRDRKIQGTSMGGNRFRVDMPRLLELWRQGRLKLDTLISG
                     KIKLDAINEGFELLKSGAPVRNLIDFGVV"
BASE COUNT          508 a          813 c          825 g          496 t
ORIGIN      
        1 tgggcggctg gcggcacgcg gttgctccgg catcgtgacg gatggcgggt tgcgggattc
       61 cgagggcatt ctgaagaccg ggttgccggc ctatcatcgt cgcccgactt ccccgcccag
      121 tccgatcgtt caccaaccgt atgatattgg gttgccgatc gcgtgcggcg gggttgcggt
      181 ttatcccggc gacgtcattg tcggcgattg cgatggcgtc gtggtcatcc cggccgatct
      241 ggtcgaggaa atcgctgcgg aggccgctgc gcaaaccttg ttcgatgagt tcgccgaggc
      301 cgaggtcaag aagggccgtt cactgatcgg actgttccca gcacagaacg accagtgcaa
      361 agcggatttc gccgcgtgga agaaagagcg cggcgtcgaa taacgtcagc ccaacgcctg
      421 ggcgagtgcg gcgcgggcag cggcgagacg ctcaagcgcc tgcgttgagg tcaaagccgg
      481 cggtgcaccg atcgtaatgt gggtaacacc ggcggcctgg tatttgcgac cggtctcgat
      541 ccatgcggcc ggcccgccgt cccctgcgac cagcgaagcg cggatcggaa atcccgccgg
      601 ttcacgccca gagtcgcgca gatactgttg aaaccgcgga acgtgcggca ggaagtcacc
      661 gattgtcatc cagccatcgg cgaggcgggc aactcggcgc aataccggct catccgtgcc
      721 ggtaccgaac caaatcggga tcgccgccgg acgcacgaga ccgacattct caaagtcatg
      781 aaatcgacct ttgaaggtca cgtacggttc cgaccaaagc cgccgcagca ccgtcacctg
      841 ttcttcgagc ctcgcggccc gtgtgcgcgg gtcctggcca agcgcgtggt actccgccgc
      901 gttccagctg atcccaacgc cgagctcgaa ccgtccgccg ctgaccaacg ccagttccgc
      961 cgcttgtttc gcgacaagcc cggttggcag agcgggcaaa atcaaaattg cgctcatgaa
     1021 tcgaatgcgc tgcgtgacgc ctgccagata cgaaaacgtg acgaacggat cgttgaacgg
     1081 tccgacatat tgcggcgccg cccggtcagg atgcgtgccg gcgggctgac ccagaacatg
     1141 acccgcagtg ccggtaaaat cgaacccggc atcctccaga gcggtcgcat aagcgcggat
     1201 ggcagcggca tcaggcagtg cctgtagcgg gaacccggct ccatattgca tggtcaaacc
     1261 actccaaagt cgatcaggtt gcgcaccggg gcaccggatt tcagcagctc gaacccctcg
     1321 ttgatggcat cgagtttgat cttgccggag atcaacgtgt ccagcttcag gcgtccctgc
     1381 cgccagagtt ccagcaggcg cggcatgtcg acgcggaagc ggttgccgcc catgctggtg
     1441 ccctggattt tccggtcacg caggaagtcg gcaccatgca actcgatctt ggtgccgaac
     1501 gggatcatgc cgatgatggt tgcgacgccg cccggccgca acatggcgaa gcattgttct
     1561 gctgtcgcct tcaggccaat cgcctcgaac gagtacggca cgccgtggcc attggtcatg
     1621 tccttgaccg ccgccaccgg atcgacgttg gaggcgttga tggtatcggt cgctcccatc
     1681 tcgcgtgcct tttccagctt cgccgggttg gtgtcgatgg caatgatctt cgacgcgcct
     1741 gccagtgcag caccgttcac cgccgacagg ccgatgccgc cacagccaac caccgcgacg
     1801 gttgagccag gctcaacctt tgccgcgttg aataccgcgc cgacgcccgt catcacaccg
     1861 caaccgacca aagcggcgcg atcgagcggg atgtctttgt tgatcttcac gaccgcgtgt
     1921 tcgtgcacca gcatgttctc ggcaaaggcc gacagattga aggcctggtt cagcgtctgg
     1981 cctttccact tcaaacggcg agcagcacct ggcagcaact tcacttcggt attgtcacac
     2041 agattggtgt ggccggttgt gcaatagtcg cactctccgc aaaacaccga caggcaggtg
     2101 atgacgtgat cgccgggttt gacgtaggtg acgtcctcgc cgaccgcctc gaccacggca
     2161 gcaccctcat ggccgagtac ggcgggtgcc ggatagggat acaggccttc catgaaatgc
     2221 agatccgaat ggcacaggcc ggcatacgca gtgcgcagca ggatttcgcg ccgcttcggc
     2281 ttttcgatct cgacgtcctc gatggtcaga ggctggtggg gcgcgtggaa gaccgctgct
     2341 ctcatgttgg ttccctccgg taagatcggg gagcgtagct tctgtcgggc gagtgcggaa
     2401 gtactacgta cgcgtggata gatgcagcga ggggaattcg ctaataagtg cggcacccga
     2461 cggatggttt gggccacccg ccggggccga tcgaggaagc agcttagcgg aacaatagtc
     2521 tgatccgtat tcgccgtttg ccccatcgga gttcgacgtc gatgcaagac tttccttact
     2581 ggcggcttga ttgccgcgcc cccgaccgtg atgagaacgt gtaaaaataa caagaacatg
     2641 gc
//
LOCUS       DATAVD010001509         2246 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3304577, whole genome shotgun sequence.
ACCESSION   DATAVD010001509 DATAVD010000000
VERSION     DATAVD010001509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3304577"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            327..704
                     /locus_tag="VHX39_28980"
     CDS             327..704
                     /locus_tag="VHX39_28980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HEX3995227.1"
                     /translation="MKLPAVPDMEAFVSASRRNIETLTAANKVALEGAQAVARRHMEI
                     VQQNMAELTEAIRAMSTMEAPQAKAAKQAELLKQAYEHSVANMKELGDLIQQSNAEAV
                     KLLNARFVEALDEVKALAEKSKG"
     gene            complement(727..>2246)
                     /locus_tag="VHX39_28985"
     CDS             complement(727..>2246)
                     /locus_tag="VHX39_28985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HEX3995228.1"
                     /translation="ARRRTFAIISHPDAGKTTLTEHLLREGGAIQLAGNVRAKGERRR
                     TRSDWMGIERDRGISVVTSVMTFEYSGCVFNLLDTPGHEDFSEDTYRTLTAVDSAVMV
                     IDAAKGIEARTRKLFEICRLRDIPIITFINKMDREARDPIELLDEVASTLALDTCPVT
                     WPIGRAADFAGTYDLRKREVHLINDLPQSDPRMQAVADEVDLVRSALPEFDVESFNAG
                     HLTPVYFGSAIKDIGVKDLLDGLAGYGPQPRAQPADKRTIEATEAGLTALVFKIQANM
                     DPNHRDRIAFARVCSGRLVRGMRLKQVRTGKSIPLHAPQFFFAREREIADEAFAGDVV
                     GIPNHGTLRIGDTLTEGEDVQFTGVPYFAPEILRRVRLDDAMKAKKLRQALVELAEEG
                     VVQLFRPQDGSAPLVGVVGTLQLDVLQARLGAEYGVAIGFENSSFALARWVSSSDKAA
                     LVKFVADNRSAMADDVDGDPVFLATSSFMMRRAEELAPGLAFRDIKDIRADQLAA"
BASE COUNT          393 a          716 c          729 g          408 t
ORIGIN      
        1 cggccgcggt ctctgtcgtc cgggtctctg tcgtccgggt ctccgttgtc cgggttttcg
       61 tctggctggc aggggttggc tgggtgtcgc agccgttggg gccgcatacc atcgtcgatg
      121 cgttttcgtt gtccatggcc gatctccttc tccgtcacat ggcgtgtgaa cgcggttttg
      181 tcacgggtga gtggccttgg atttcgcatc gggcgcgcct aacctcgttc ctgttgccga
      241 accggaccag caaaaggatc ttctccatgg cgttcccccc taaatcgatg gcggattttg
      301 gcgaattcgg caaacttttc gccgacatga agctgcccgc cgttcccgac atggaggcgt
      361 tcgtttccgc cagccggcgc aacatcgaga cgctgaccgc ggccaacaag gtcgccctgg
      421 aaggggcgca ggccgtggcg cgccggcaca tggaaatcgt gcagcagaac atggcggaac
      481 tgaccgaggc gattcgagcg atgtcaacga tggaggcccc gcaggccaag gccgccaagc
      541 aggccgaact gctgaagcag gcgtatgagc attcggtcgc caacatgaag gaactcggcg
      601 accttattca gcaatccaac gccgaggcgg tgaagctgct gaacgcccgg ttcgtcgagg
      661 cgctggatga ggtcaaggcg ctggccgaaa agtccaaggg ctaacgccca cgctccccgc
      721 gggcggtcac gccgccaact gatcggcgcg gatgtccttg atgtcgcgga aggccaggcc
      781 gggggcaagc tcctccgccc ggcgcatcat gaaggacgac gtcgccagga agaccgggtc
      841 gccatcgacg tcgtcagcca tggcgctgcg gttgtcggcg acgaatttca caagggccgc
      901 cttgtcggat gacgataccc agcgggccag cgcgaacgag gagttctcga aaccgatcgc
      961 cacgccgtat tccgcaccca ggcgggcctg caggacatcc aactgcaagg tgccgacaac
     1021 gccgaccagc ggcgccgatc cgtcctgcgg gcgaaatagc tgaaccacgc cttcctccgc
     1081 cagttccacc agcgcctgac gcagcttctt ggccttcatc gcgtcgtcca ggcggacgcg
     1141 gcggaggatt tccggcgcga agtaggggac gccggtgaac tggacgtctt cgccttcggt
     1201 cagcgtgtcg ccgatgcgca gcgtgccgtg attggggatg ccgacgacgt cgccggcaaa
     1261 ggcttcgtcg gcgatctccc gttcgcgggc gaagaagaac tgcggggcgt gcaacgggat
     1321 cgatttgccg gtgcggactt gtttcaaccg catgccgcgc accagtcgcc cggagcacac
     1381 ccgagcgaaa gcgatgcggt cccgatggtt ggggtccatg ttggcctgga tcttgaagac
     1441 cagggcggtc aggcccgctt cggtcgcctc aatggtacgc ttgtcggccg gctgggccct
     1501 gggctggggg ccgtacccgg ccagtccgtc cagtaggtcc ttcaccccga tgtccttgat
     1561 cgcgctgccg aaatacaccg gtgtcagatg gccggcgttg aaactctcga cgtcgaattc
     1621 cgggagagcg gagcggacca gatcgacctc gtcggcaacc gcctgcatgc gcggatcgga
     1681 ctgcggcagg tcgttgatca gatgcacctc ccgcttgcgc aggtcatagg taccggcgaa
     1741 gtctgccgcc cgtccgatcg gccaagtgac ggggcaggtg tccaaggcta gagtggacgc
     1801 gacctcatcc agcagttcga tcggatcgcg cgcttcacgg tccatcttgt tgatgaaggt
     1861 gatgatgggg atgtcgcgca ggcggcagat ctcgaacagc ttgcgggtgc gcgcctcgat
     1921 ccccttcgcc gcgtcgatca ccatcaccgc ggagtccacc gccgtcagcg tccggtaagt
     1981 gtcctccgag aaatcctcat gccccggcgt atccagcaga ttgaacacac acccggaata
     2041 ctcgaacgtc atcaccgagg tgacgaccga gataccgcga tcccgttcga tccccatcca
     2101 atccgatcgc gtccgccgcc tctccccctt cgctcggacg ttgccggcaa gctgaatcgc
     2161 gccgccttcg cgcagcagat gctcagtcag cgtcgttttg ccggcgtcag ggtgggaaat
     2221 gatggcgaag gtgcgtcggc gggcga
//
LOCUS       DATAVD010001510         2488 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3682557, whole genome shotgun sequence.
ACCESSION   DATAVD010001510 DATAVD010000000
VERSION     DATAVD010001510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3682557"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1204
                     /locus_tag="VHX39_28990"
     CDS             <1..1204
                     /locus_tag="VHX39_28990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX3995229.1"
                     /translation="TVFTTAFFYFQNHQRVIAAATIGALSSLAPTLGPTVGGWITDNY
                     SWHWLFFVNLVPGVFVTIVVPLMVKIDKPDLSLLKGADYPGMALMAIFLGCLEYTLEE
                     GPRWDWFGDDTIRTTAWISGIAGVAFIWRSLTFARPVVDLRALKNRNFALGCFFSFMT
                     GIGIFATIYLTPLFLARVRGFSALQIGLAVFSTGIFQIMAIPVYTYFARKIDLRWLML
                     FGMACFTFSMWNFTPITHDWGWRELLVPQAFRGFSQQFAVAPTVTLTLGVIPPDRLKL
                     ASGLFNLMRNLGGAIGIAACGTILNDRTNLHFLRLAEHLNNTNSAMVDMLGHTATRAT
                     ALSGGDAVMGHAIALRELWSLTMREAQTQTYSDAFLALMLCLGIATVMVPLMRKVVPP
                     KAPVADAH"
     gene            complement(1468..>2488)
                     /locus_tag="VHX39_28995"
     CDS             complement(1468..>2488)
                     /locus_tag="VHX39_28995"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3995230.1"
                     /translation="GINSLIGANPMVTSLLARQTRNVRVLSLGTLVSLRPDPVRIAEE
                     YATADILAKGRFDIGFVKSGGTEMASSNVNPVNNEERYWEAIDLIKKALTTHDGPFSW
                     EGKHFSHRHVNIWPRPYQNPHPPMWSATGDPSSSAEVGRRGMRHVLVLRGPEGTKRAY
                     DAHRKARADAGLPKVTTDNFAYAALVYVGDTEEEGIEVGSKLLWFLNTSLKSAPQFNK
                     FLPGAAPPVAAPSLYRTQPKADAGLALVNAEKGVAPASRNAEKLISITAPEAMAQGIL
                     FAGNPDSVYRQIMAFYDKVGGFGHLALVGRSGYMTHAESSKGIRLFTQEVLPRLKEIA
                     PVEVG"
BASE COUNT          422 a          815 c          755 g          496 t
ORIGIN      
        1 aaccgtgttt accacggcgt ttttctattt ccagaaccat cagcgggtga tcgcggcggc
       61 aaccatcggg gccctgtcgt ccctggcgcc gacccttgga ccgaccgtgg gcggctggat
      121 caccgacaac tattcctggc actggctgtt cttcgtcaac ctggtgcccg gcgtcttcgt
      181 gaccatcgtc gtcccgctga tggtgaagat cgacaaaccc gatctatcgc tgctgaaagg
      241 cgccgactat cccggcatgg cgctgatggc gatattcctg ggatgcctgg aatatacgct
      301 ggaggaaggc ccgagatggg actggttcgg tgacgatacc atccgcacga ccgcctggat
      361 ctccggcatc gccggtgtgg cgttcatctg gcgcagtctg acattcgccc gcccggtggt
      421 cgatctgcgg gcactgaaaa accgcaactt cgcgctgggt tgtttcttct ccttcatgac
      481 cgggatcggc atcttcgcga cgatctacct gacgccgctg ttcctcgctc gggtgcgcgg
      541 cttcagcgcg ctgcagatcg gactggcggt gttctccact ggcattttcc agatcatggc
      601 gatcccggtc tacacctact tcgcgcgcaa gatcgacctg cgctggctga tgctgttcgg
      661 catggcgtgc ttcaccttca gcatgtggaa cttcaccccc atcacccatg actggggctg
      721 gcgggaattg ctggtcccgc aggcattccg tggcttttcg caacagttcg ccgtggcccc
      781 gaccgtgacg ctgaccctgg gcgtaatccc gccggatcgg ctgaaactgg cctccggcct
      841 gttcaacctg atgcgcaacc tgggcggcgc catcggcatc gccgcttgcg gaacgatcct
      901 gaacgaccgc accaacctgc acttcctgcg tctggcggag cacctcaaca acaccaacag
      961 cgcgatggtt gacatgttgg ggcataccgc cacccgagcc accgcgctga gcgggggaga
     1021 tgcggtgatg ggccacgcca tcgcactgcg cgagctttgg tcgctgacga tgcgggaagc
     1081 gcagacccag acctactcgg atgcgtttct ggcgctgatg ctatgcctgg gcatcgccac
     1141 ggtgatggtc ccgctgatgc gcaaggtcgt accgcccaag gcaccggtgg ctgacgcgca
     1201 ttgaggcgtg atcgccgcag gccggaagcc gtgaaccatg cggcaaacaa agacctatat
     1261 caaccggcgc tgaagccgac tcttctgttg cctcatccgt catgccgacg gaggtcggta
     1321 tccatgcctt ttgcccacga aacaaaggcg cggatggcga gccttcgccc gccaagacgg
     1381 gggcacggcg gtgccgcagg gtcaacaaca acgtcgcttg gattatagag caagaccggg
     1441 tcggtccgac ccagtcttgc caggcgttta tcccacctcc accggcgcga tttccttcag
     1501 gcgcggcagc acctcctggg tgaacaggcg gatgcctttg ctcgattccg catgagtcat
     1561 atagcccgac cggccgacca gggcgaggtg cccgaaaccg ccgaccttgt cgtaaaacgc
     1621 catgatctgc cggtagacac tgtccggatt gccggcgaac aggatgccct gcgccatcgc
     1681 ctccggcgcg gtgatggaga tcagcttttc cgcgttccgg ctggccgggg cgacgccttt
     1741 ttccgcattc accagcgcca gtccggcatc ggcttttggt tgcgtccgat acaaactcgg
     1801 cgcggccacc ggcggcgcgg cgccgggcag gaacttgttg aactgcggcg ccgatttcag
     1861 gctggtattc aggaaccaca gcagcttgct gccgacttcg atcccttcct cctcggtgtc
     1921 gccgacgtag accagtgcgg cataggcgaa attgtccgtc gtcaccttcg gcagaccagc
     1981 atcggccctg gccttgcgat gcgcgtcgta cgcgcgcttc gtgccctccg gtccgcgcag
     2041 caccagcaca tggcgcatgc cccgccgccc gacctcggcc gaactcgacg gatcgccggt
     2101 cgcggaccac atcggcggat gcgggttctg gtagggccgc ggccagatgt tcacgtgccg
     2161 gtggctgaaa tgcttgcctt cccaactgaa cggcccgtca tgcgtggtca gcgccttttt
     2221 gatcaggtcg atcgcttccc agtagcgttc ctcattgttc accggattga cgttggagga
     2281 cgccatctcg gtgccgcccg acttcacgaa gccgatgtcg aaccggcctt tggcgaggat
     2341 atcggcggtc gcgtattcct cggcgatgcg caccggatct ggtcgcaacg aaaccaatgt
     2401 ccccaggctc agcacgcgca cattgcgggt ttgccgcgcc aggaggctgg tcaccatcgg
     2461 attggcaccg atcagcgaat tgatgccg
//
LOCUS       DATAVD010001511         2407 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1260580, whole genome shotgun sequence.
ACCESSION   DATAVD010001511 DATAVD010000000
VERSION     DATAVD010001511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1260580"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..349
                     /locus_tag="VHX39_29000"
     CDS             <1..349
                     /locus_tag="VHX39_29000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995231.1"
                     /translation="QHREATCGPLAPLTETELAALTDVAGRAVIEETKDGLGTWRYTV
                     KPAGVARGPDPASGGGQFWVVSAGTAHVPGGALLPVNSCVFVAPDDAALEMFAGPAGA
                     DLLCMQFPKRAHH"
     gene            359..>2407
                     /locus_tag="VHX39_29005"
     CDS             359..>2407
                     /locus_tag="VHX39_29005"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3995232.1"
                     /translation="MDGDRFGLGVSPKRREDARFLIGKGAYLDDLVFPDVAHAIFVRS
                     PHAHAGIGSVDVAQARAAPGVLAVLTAADVLADGLNDLPPTVEANAQTGERFQFTPMP
                     LLARDEVRYVGQLVALVVAETRAQALDAAELVDVAYQARPVTMTPEAAAATPALLCMD
                     WSLGDADAAFAGAAHVVSLRLHNHRIVTNPMEPRGVVGVYDSEADQFIAHVSSQSLHG
                     NRDAIARVLNVPSERLRFVAPDVGGGFGAKNFPYPEQALIPWAAKRCGRPVKWIANRT
                     EVFISDHQARDHLADASLALDADGRFLGLRVDSIANIGAYMCGGAGSLQTFQYPHLQG
                     GIYNIPRIGLRIRTVLTNTTPIGVTRGPGFAEAINVIERLIDAAARQCGFDRATLRRL
                     NMSRTPMTNALGYVVDSGAFAETFDHALAAADLAGFPVRRRDSEARGLVRGLGFACHI
                     KATGGNPSENVDIRFADDGSVLLITGTQTIGQGHETTFPQILAHCLGIPNDLVRLVQG
                     DTGVIRAGGGHGSSRATYMGGTAIFRASEEIVAKGMPIAASMLEAAEADIGFSDGRFS
                     IAGTDRSVSLLDVAAKARESGMPLDTYHFWTREHMTFPNGTHVVEVEIDRGTGRVALV
                     RHTAVDDYGVIVNPMIAAGQAHGAIAQGSGQALMEHAVFDAATGQCVSGSFMDYTMPR
                     A"
BASE COUNT          401 a          730 c          802 g          474 t
ORIGIN      
        1 tcagcaccgc gaggcaacct gcggtccgct cgcaccgctg accgagacgg aactggccgc
       61 gctgaccgat gtcgccggcc gcgccgtgat cgaggaaacc aaggacggcc tcggcacctg
      121 gcgctacacg gtgaagcccg ctggcgtcgc acgaggaccg gatccggcct caggcggcgg
      181 ccagttctgg gtggtcagcg caggaaccgc tcatgttcca ggcggcgctc tgttgccggt
      241 gaactcttgc gtgttcgtgg cgccggatga tgcggctctg gagatgttcg ccggacctgc
      301 gggggccgat ctgctttgca tgcagttccc gaagcgcgcg caccactgat ccacagccgt
      361 ggatggggac cgtttcgggc tcggggtctc gccgaagcgg cgtgaggatg cgcggtttct
      421 gatcggcaag ggtgcctatc tcgacgacct ggtgtttcct gatgtggcgc acgcgatatt
      481 tgtgcggtcg ccgcatgcgc atgccggaat tggttcggtc gacgtggctc aggcccgcgc
      541 ggcgcccgga gttctcgcgg ttttgaccgc cgcggacgtc ctggcggacg gattgaacga
      601 cctgccgccg acggttgaag ccaacgccca gaccggcgag cggtttcagt tcacgccaat
      661 gccgttgttg gcgcgtgacg aggtgcgtta cgtcggacaa ttggttgctc tggttgttgc
      721 ggagacccgc gcccaggcac tggatgcggc agagcttgtg gatgtggcgt accaggcgcg
      781 tcctgtcacc atgacgccgg aagccgccgc cgcaacgccc gccctgcttt gcatggactg
      841 gtcactgggc gatgcggatg cggcatttgc cggcgcggcg cacgtggtat cgctacgcct
      901 gcacaaccat cggatcgtta ccaatccaat ggagccgcgg ggagttgtcg gcgtctacga
      961 cagcgaagcg gaccagttca tcgcgcatgt ctccagccag agcctgcacg gcaatcgcga
     1021 cgccatcgct cgggtcttga atgtgccgtc cgaacggttg cggttcgtag cacctgacgt
     1081 cggtggcggc ttcggtgcca agaattttcc ctaccccgag caggccctga ttccctgggc
     1141 tgccaaacgc tgcggcagac cggtgaaatg gatcgccaat cggactgaag tttttatcag
     1201 cgatcaccag gcgcgcgatc atctcgcaga cgcatcgttg gcgctggatg ccgatgggcg
     1261 atttcttggc ctgcgcgtcg atagcattgc caacatcggc gcctatatgt gcggtggtgc
     1321 cggctcgttg cagaccttcc agtatccgca tctgcagggt ggcatctaca acattccccg
     1381 catcggttta cggattcgca ccgttctgac caacaccacg ccgatcggcg tgacgcgagg
     1441 tccaggattc gcggaagcga tcaacgtgat cgaacggctg atcgatgcag cggcccggca
     1501 atgtggtttc gatcgtgcga cgttgcgccg gcttaatatg tcacgcacgc cgatgaccaa
     1561 cgcgctgggt tatgtggtcg acagcggcgc gtttgcggag acgtttgatc atgcacttgc
     1621 tgccgctgac ctggcaggtt tcccggtacg tcgccgggac agcgaagcac gcggcttggt
     1681 gcgtggtctg ggcttcgcct gccacatcaa agccaccggc ggcaatccat cggaaaatgt
     1741 cgacattcgg tttgccgacg acggcagtgt tctgctgatc accggcacgc agaccatcgg
     1801 ccagggtcac gagacgacct tcccccaaat cctggcgcat tgtctgggta ttcccaacga
     1861 tcttgtgcgc ctcgtgcagg gcgataccgg ggtcattcgt gccggcggag ggcatggcag
     1921 ctcgcgcgcg acgtacatgg gtgggacggc gatttttcgc gcgtcggagg aaattgtcgc
     1981 caagggcatg cccatcgcgg catcgatgct ggaagcggcg gaggcggata tcgggttctc
     2041 tgacgggcgg ttctcgatcg ccggcaccga ccgcagtgtg tctctgctgg acgttgcagc
     2101 aaaagcgcgc gagtccggca tgccgctcga tacctatcac ttttggacac gcgagcacat
     2161 gactttcccc aacggcacgc acgttgtgga agtggagatt gatcgcggca ccggccgcgt
     2221 tgccctggtg cgtcataccg cggtcgacga ttacggcgtc atcgtcaatc cgatgatcgc
     2281 cgcgggccag gcgcatggtg cgatcgctca gggatcgggt caggcattga tggaacacgc
     2341 ggtgttcgat gcggcgactg gtcagtgcgt cagcggatcg ttcatggact acaccatgcc
     2401 gcgcgcg
//
LOCUS       DATAVD010001512         2107 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_890982, whole genome shotgun sequence.
ACCESSION   DATAVD010001512 DATAVD010000000
VERSION     DATAVD010001512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_890982"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..402)
                     /locus_tag="VHX39_29010"
     CDS             complement(<1..402)
                     /locus_tag="VHX39_29010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3995233.1"
                     /translation="MTTWTLLASVVIGCAALVLLARAERPVFRLATPVVFGMLVLWLW
                     QVVCTGYGVPVVLLPAPSQIGTAIFAHLPTLGLDFQQTFLRAVIPGWIVGSLTGLAAA
                     IALDGSPFLRRGVLPLSSLVSAMPIVGIAPIM"
     gene            complement(399..1262)
                     /locus_tag="VHX39_29015"
     CDS             complement(399..1262)
                     /locus_tag="VHX39_29015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX3995234.1"
                     /translation="MARLSRLLPVLCVLVVLTVVWYGAALGMNWDQAQALADDGAGWP
                     EVAASALALDRPLLPTPDQVVGEMIRSVFGYNVASPRSLVFHAVVTAWEGLLGFGIAA
                     VSGLGLAIGIVQFRTLDRALMPWLIVSQAVPVLAIAPMVVVVLGNIGLTGVTPKALIA
                     GWLSFFPIATGMAKGLRSSDPMRRDLLRTYSATRTQVFLKLSWPDSMAFLFPAMKVAA
                     PLALVGAIVAELPTGAQAGLGARLLTGSYYGQTLQIWAALFMAALLATLAVAAVDAAQ
                     ALLIRARGGRL"
     gene            complement(1255..2019)
                     /locus_tag="VHX39_29020"
     CDS             complement(1255..2019)
                     /locus_tag="VHX39_29020"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3995235.1"
                     /translation="MEARDLGVTFTADGQRTVALADVDLTVREGEFVSLIGPSGCGKT
                     TLLRLIADLEQATAGTLTVNGVTPQVARKQRPYGYVFQAPALYPWRNVERNVMLPLEV
                     MAIPRAERQARAAQVLDLVGLSEFRRRFPWQLSGGMQQRVSIARALSFEPNLLLMDEP
                     FGALDEITRDGLTLHLHQLWRRTGLTAMFVTHSVQEAVFLSTRIVVMSPRPGRIVTVI
                     ESGLPQERDPDVRETPEFLAVAHAVRTALRNGHNDG"
BASE COUNT          475 a          704 c          616 g          312 t
ORIGIN      
        1 catgatcggc gcgatcccga cgataggcat cgcgctgacg agactgctca gcggcaacac
       61 accgcggcgc aagaacggtg aaccatcgag cgcgatcgcc gccgccaatc ccgtcaggct
      121 gccgactatc catcccggaa tgactgcacg cagaaacgtt tgctggaaat ccaggcccag
      181 agtcggcaaa tgtgcgaaaa tggcggtgcc aatctgcgat ggcgccggta gcaaaaccac
      241 tggcacgcca tagccggtgc agacgacctg ccacagccat aacaccaaca tgccgaatac
      301 caccggcgtt gccaggcgga aaaccggccg ttcggctcgg gcaagcagga ccaaggcggc
      361 gcatccgatg accaccgagg caagcagggt ccatgtcgtc acagccgtcc gcctcgggcg
      421 cgtatcagca gcgcctgtgc cgcatcgact gcggccacag ccaacgtcgc caacagcgct
      481 gccatgaaga gtgctgccca gatctgcaga gtctgcccgt agtacgaccc cgtcagcaat
      541 ctcgcaccaa gtcccgcctg ggctccggtg gggagctcgg caacaatcgc gcccaccaaa
      601 gcgagcggcg cggcgacctt catcgccggg aacagaaacg ccatcgagtc gggccaactg
      661 agtttcagaa aaacctgcgt gcgggtcgcg ctgtaggtgc gaagcagatc acgccgcatt
      721 gggtcggacg aacgcaggcc ttttgccatt ccggtagcga ttgggaagaa actcagccag
      781 ccggcaatca atgctttcgg ggtcaccccg gtcaatccga tattgcccag tacaaccacg
      841 accatcggtg cgatcgcgag caccggcacc gcctggctaa cgatcagcca cggcatcagt
      901 gcgcgatcca acgtgcgaaa ctgaacaata ccgatcgcca ggcccagtcc ggataccgca
      961 gcaatgccaa agcccagtag accctcccag gccgttacca cggcgtggaa taccaaactg
     1021 cgcggcgacg caacgttgta gccgaacacg ctgcggatca tttctcccac gacctgatcg
     1081 ggcgtcggca gcaggggccg gtcgagtgcc agcgcagatg ctgcgacttc aggccaaccc
     1141 gcgccgtcgt cagccaatgc ctgcgcctga tcccagttca ttcccagtgc ggcgccgtac
     1201 cacactacgg tcagtaccac gagaacacac agcacaggca gcaatcgcga caatctagcc
     1261 atcgttatgg ccgttccgca gggcggttcg gacggcgtgc gccacggcaa ggaactctgg
     1321 cgtttcgcgc acatcgggat cccgttcctg cggcaagcca gattcgatga ccgtaacaat
     1381 ccgacccgga cgaggcgaca tcacaacgat gcgggtggac agaaacaccg cctcctgcac
     1441 cgaatgcgtg acgaacatcg cggtcaaacc ggtacgacgc cacagttgat gcaaatgcag
     1501 cgtcagccca tcacgggtaa tctcatccag cgcgccgaac ggctcatcca tcagcagcag
     1561 atttggctcg aaactcagag cccgcgcgat cgagacgcgt tgttgcatgc cacccgaaag
     1621 ctgccatgga aaccggcgcc ggaactcgct caatccgacc agatcaagca cctgggccgc
     1681 acgtgcctgc cgctcggcgc gaggtatggc catcacttcc aacggcagca tcacgttgcg
     1741 ctcgacgttg cgccagggat acagcgccgg agcctgaaaa acatagccat aaggacgctg
     1801 tttgcgagcc acctgcgggg tgacgccgtt caccgtcagg gtaccggcgg tggcctgctc
     1861 caggtcggca atcaggcgga gcagcgtggt cttgccacaa ccggagggac cgatcagcga
     1921 gacgaattcg ccctcgcgga cggtcagatc aacatcggcc aaggcaaccg ttcgctgacc
     1981 atcggcagtg aacgtcacac ccaggtcgcg tgcctctatg acgaccgggc tttcaggtgc
     2041 agcggggtcc gccgaagcat cgggatgtac gagagacccc gcctctgtca cgggccgatc
     2101 tcagacg
//
LOCUS       DATAVD010001513         3152 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_329537, whole genome shotgun sequence.
ACCESSION   DATAVD010001513 DATAVD010000000
VERSION     DATAVD010001513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3152
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329537"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            34..1854
                     /gene="htpG"
                     /locus_tag="VHX39_29025"
     CDS             34..1854
                     /gene="htpG"
                     /locus_tag="VHX39_29025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011252588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HEX3995236.1"
                     /translation="MNDTVLEQHTFGAEVGRLLDLVVHSLYSEREIFLRELVANAADA
                     VDRRRFEALTDSNLAPPADAKIRIVPDKQGSTLLISDDGIGMTRQELIDNLGTIARSG
                     TRAFAQNLASAKPEERPNLIGQFGVGFYSAFMVADRVEVTSRKAGSDEAFTWASEGAG
                     QFTLAPATREQPGTDIVLHMKSDASEYLEPMRLETVIRKWADHITLPITVAQDGKDQP
                     ANEGTALWRKSKSETTEQSYKEFYRHLGHFFDEPWATLHWRAEGTLEYFCLLFIPGMK
                     PFDPVEGDRDAHVRLHVRRMFITDKADLLPHWLRFVSGVVDTEDLPLNVSREMLQTTP
                     VLARIRRALIGRVLTELKTRAKDADDYNKFYENFGPILKEGVWEDAEHRAEIAPLLRF
                     HSSAQDGWTSFPDYVSRMKDGQDAIYYLTGDHAEALKNSPQLEGFRAKGFEVLLMSDS
                     IDSFWPERLDSFEGKKLRSVTQAAEDLGKEDDQPDISPLLAAMKAALDTRVADVRATA
                     RLTDSAVVLASDGKGPDLAMQRLMRRAGRAMMPTKPVLEVNPRHKLIEALSAKLDDTA
                     LIADAAETLLDLAQVQEGDLPTDATAFARRVTTLLAGSLG"
     gene            2008..>3152
                     /locus_tag="VHX39_29030"
     CDS             2008..>3152
                     /locus_tag="VHX39_29030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase family protein"
                     /protein_id="HEX3995237.1"
                     /translation="MLHQTIDCIADSPEGTRPVHAVRPDDLAQFLEALPSAQAAFLRD
                     TMFAAKAGEFRFLPGPDGVAGAVLGLGTDRSPFVFGNLPLQLPETSSWHLEPGEYDPE
                     AATLGYCLGAYRYTRFRSNDRNPATFFVSSGHETSLAQASATWMVRDLINTPANILGP
                     VELADFSVSLADRYGAVSQVSAGAALEEAYPTVAAVGRGSARPPRVVTFHWRGSAATD
                     ASPLLSLCGKGVCFDTGGYDLKPSAGMLRMKKDMGGAATVLGLARVIMQSDLPIRLAV
                     RVGCVENSVSGTAMRPSDVIRTRSGLTVEVGNTDAEGRLVLCDLLHEASAENPSLLVD
                     CATLTGAARVALGPDLPALFCNDDGIAEAVQRRGAMVHDPLWRLPLWS"
BASE COUNT          560 a         1042 c          998 g          552 t
ORIGIN      
        1 gaccgcatat ggcccggcgc aaggaggcca cgcatgaatg acacggtttt agaacaacat
       61 acatttggtg ccgaggtcgg acgcctgctc gacctggtgg tccactctct ttattccgag
      121 cgcgagatat ttctgcgcga gttggtggcc aatgcggcgg acgcggtgga tcgccgccgg
      181 ttcgaggcgt tgaccgattc caacctcgcc ccgcccgcgg acgcgaaaat ccgcatcgtg
      241 ccggacaagc agggcagcac cctgctgatc tccgacgacg gcatcggcat gacccggcag
      301 gagctgatcg acaatctggg caccatcgcc cgctccggca cccgcgcttt cgcgcagaac
      361 ctggcctcgg ccaagccgga agagcggccc aacctgatcg gccagttcgg cgtcggcttc
      421 tattccgcct tcatggtggc cgatcgcgtc gaggtcacct cccgcaaggc cggcagcgac
      481 gaagccttca cctgggcatc cgaaggtgcc ggccagttca ccctggcgcc ggcgacccgc
      541 gaacagcccg gcaccgacat cgtgctgcac atgaaatccg acgcgtcgga gtatctggag
      601 ccgatgcggc tggaaaccgt gatccgcaaa tgggccgatc acatcaccct gccgatcacc
      661 gtcgctcagg atggcaagga ccagccggca aacgaaggca cggcgctgtg gcgcaagtcg
      721 aaatccgaga cgaccgaaca gtcctacaag gaattctacc gccacctcgg ccacttcttc
      781 gacgaaccct gggccacgct gcactggcgc gccgagggga cgctggaata tttctgtctg
      841 ctgttcatcc ccgggatgaa gccgttcgat ccggtggaag gggaccgcga cgcgcatgtc
      901 cggctgcatg tccggcgcat gttcatcacc gacaaggccg acctgctgcc gcactggctg
      961 cgcttcgtca gcggcgtcgt cgataccgaa gacctgccgc tgaacgtctc gcgggagatg
     1021 ttgcagacaa cgccggttct ggcccgcatc cgccgggcac tgatcggcag ggtgctgacc
     1081 gaactgaaga ccagggcgaa agatgctgat gattacaaca agttctacga aaatttcggt
     1141 ccgatactga aggaaggcgt ctgggaggac gccgaacatc gcgccgagat cgcgcccctg
     1201 ctgcgcttcc actcctccgc gcaggacggc tggacctcat tccctgacta cgtgtcgcgc
     1261 atgaaagacg gccaggacgc aatctactac ctgaccggcg accatgccga ggcgctgaaa
     1321 aactcgccgc aactggaagg cttccgcgcc aagggcttcg aagtgctgct gatgtcggat
     1381 tcgatcgatt cgttctggcc ggagcggctg gatagtttcg aaggcaagaa actgcgcagc
     1441 gtcacccagg cggccgagga cctgggcaag gaggacgacc agccggacat ctcgccgctg
     1501 ctggcagcca tgaaggcagc cctcgacacc cgcgtggcag acgtccgagc caccgcccgg
     1561 ctgaccgaca gtgcggtggt gctggcgtcg gacggcaagg gaccggacct ggcgatgcag
     1621 cggctgatgc gccgcgctgg acgggcgatg atgcccacca agccggtgct ggaggtcaat
     1681 ccgcggcaca agcttatcga ggcgctgtcc gccaaattgg acgacaccgc gttgattgcg
     1741 gatgcggcgg agactctact cgacctcgcg caggtccagg agggcgacct tccaaccgac
     1801 gccaccgcgt tcgcaaggcg cgtcaccacc ctactggccg gcagcctggg ttagcccgcc
     1861 ggcctttgac ggcaaaacgg cgccggtcgg gtggcacacc cggtcggttc tgcggcagcc
     1921 ggcgtgctgc gggttggccg gcctgtttga aaacgcgatt cgggtccaag gtcgggggca
     1981 cctcaccccc gacccaggat cgcacccatg ctgcaccaga ccatcgactg tattgctgac
     2041 tcgcctgagg gcacacgacc ggttcatgct gtccggccag atgacctggc acagttcctt
     2101 gaagcactgc cgtccgccca ggcggctttc ctgcgcgaca ccatgttcgc ggcgaaggcc
     2161 ggcgagtttc gtttcctacc cggcccggac ggcgtcgccg gtgctgtact gggcctcggc
     2221 accgatcgtt cgccattcgt tttcggcaac cttcccttgc aactgcctga aacatcgtcg
     2281 tggcacctcg aacccggcga atacgacccc gaggccgcaa cgctcggtta ttgcctcggg
     2341 gcatatcgtt acacccgttt ccgctcaaac gatcgtaatc cagcgacatt ttttgtatcg
     2401 tccggacacg aaacgagcct ggcgcaggcg tccgctacat ggatggtgcg cgatctgatc
     2461 aatacacccg ccaatatcct cggtccggtc gaactggcgg acttttctgt gtctctagcg
     2521 gatcgctacg gcgccgtatc acaggtgtcc gccggcgcag cactggagga agcctatccg
     2581 acggtcgccg ccgttggccg cggatccgct cggccgccgc gcgtggtaac cttccactgg
     2641 cgcggcagtg cggcaacgga tgcctcgcca ctgctgtcac tgtgcggcaa gggcgtctgt
     2701 ttcgacaccg gcggttacga cctgaaaccg tccgcgggca tgctgcggat gaaaaaggat
     2761 atgggtggtg ccgcgaccgt tcttgggctg gctcgggtca tcatgcagtc cgacctgccg
     2821 atccgcctgg cggtgcgcgt cggctgcgtc gagaattccg tgtccggtac tgcgatgcgg
     2881 ccgtccgacg tgatccggac ccggtccggc ctgaccgtcg aggtcggcaa caccgacgcc
     2941 gagggcaggc ttgtgctgtg cgacctgctg cacgaggcat cggcggagaa cccgtccctg
     3001 ctggtggatt gcgctacgct gaccggggcc gcccgcgttg ccctcggccc ggacctgccc
     3061 gcgctgttct gtaatgatga tggtatcgcg gaggcggttc aacgccgtgg cgccatggtg
     3121 cacgacccgc tttggcgcct gccgttatgg tc
//
LOCUS       DATAVD010001514         1740 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2191880, whole genome shotgun sequence.
ACCESSION   DATAVD010001514 DATAVD010000000
VERSION     DATAVD010001514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2191880"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..1051)
                     /locus_tag="VHX39_29035"
     CDS             complement(152..1051)
                     /locus_tag="VHX39_29035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995238.1"
                     /translation="MPVPFKSFYLASTALSLSLVAAVAHADPALPNLVNLDFSDVKNQ
                     PKGAFTYVDPVGWTGGKGLIFIDGQSADESAASNTYLSTYGNPTGSVTGNYVEADGNP
                     SFESGFNYSVTGLTVGQTYTLTFYQGASEQSGYGLINGQPVPTTDQWIVSLGTSGLVL
                     NGKGSGTTDPIYGPTETYSNPDPNASVVATPLMSVPYQGTVGWDFVSITLTADATTDL
                     LSFLAYGDNGSTVNLPPIAFLSGVDSPAGLGYVPEPVGLSVFGVGLVGLGAVARRRRV
                     GKAKGVGADRRRHDEARPAESQS"
     gene            complement(1235..>1740)
                     /locus_tag="VHX39_29040"
     CDS             complement(1235..>1740)
                     /locus_tag="VHX39_29040"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX3995239.1"
                     /translation="GAVRIVDKLPGNFQYAGLIHAALPNARVIHTGRDPVDTCLSVFS
                     VLFAGTAHLYSYDLGELGRYYRAYQQAMTHWRNVLPAGVMLDVRYEAVVDDLAGEARR
                     IVAHCGLDWDDACLAFHATKRPIRTASHAQVRQPIYRGSVGRPRPPREMLLPLLAAIG
                     GDASVAG"
BASE COUNT          359 a          585 c          508 g          288 t
ORIGIN      
        1 gttgaccccg tccgtcatgc cggcgcatgc cggtatcaac gccttttaca agcaaaaaca
       61 aagacatgga tggcctgcgc cagccatgac ggttgctcgg tgctgccgat gggtccaaca
      121 tcaagggcga ttggtataat accagtccga attaagactg actctccgcc ggccgcgcct
      181 cgtcatgccg gcggcggtcg gcacccacgc cttttgcctt tccaacgcgc cgccgccgag
      241 cgaccgcccc aagcccgacg agaccgaccc cgaaaaccga cagaccgacc ggttccggca
      301 cataccccag cccggcgggc gaatcgaccc cggacaggaa cgcgatcggc ggcagattga
      361 ccgtgctgcc gttgtcgcca taggccagga agctcagcag gtcggtggtg gcgtcagccg
      421 tcagggtgat cgacacgaag tcccacccga ccgtgccctg gtaaggcacc gacatcagcg
      481 gcgtcgccac gacgctcgcg ttcggatccg ggttggaata ggtctccgtg ggaccataga
      541 tcgggtcggt cgtgccgctg cccttgccgt tcagcaccag tcccgacgtg cccagcgaca
      601 cgatccactg gtccgtggtg ggaaccggct ggccgttgat caggccgtat ccgctctgct
      661 cgctggcacc ctggtagaag gtcagcgtat aggtttggcc gacggtcaat ccggtgaccg
      721 agtagttgaa gccgctctcg aagctcggat tgccatccgc ctccacatag ttcccggtca
      781 cgctgccggt cggattgcca taggtcgaca aataggtgtt gctcgcagcc gattcatcgg
      841 ccgattggcc atcgatgaag atcaggccct ttccgccggt ccagccgacg gggtcgacgt
      901 aggtgaaggc gcccttgggc tgattcttga cgtccgaaaa gtcgagattc accaggttcg
      961 gcaacgcggg atcggcgtgc gccacggcgg ccaccagcga cagcgacagg gcggtggagg
     1021 cgagatagaa cgacttgaat ggcactggca cggtcgatac ttccccaaaa tcgattgcct
     1081 cgcgcaacgc aagacccatg ccaatagcga aaatcgtaat gtttcaaagc gttgtatgta
     1141 gccgaaccgc cacatcccgc cggacctgta aagtctgccg acaaccatcg cgcgaaacgt
     1201 tgtaaccgtt ttgtaataga gaccgataaa gccgctaccc ggcaacggac gcatcccccc
     1261 cgatcgccgc aagcaatggc aacagcatct cgcgcggcgg acgcggccgg ccaaccgaac
     1321 cgcgatagat cggctggcgc acctgcgcat gactggcggt gcggatcggc cgtttcgttg
     1381 catggaacgc caggcacgca tcgtcccagt ccagcccgca atgcgcaacg atccggcgcg
     1441 cctctcccgc cagatcatcc accaccgcct cataccgcac gtccagcatc acgccggcgg
     1501 gcagaacgtt ccgccaatgc gtcatcgcct gctgataggc gcgataatac cggcccagtt
     1561 cccccaggtc gtacgaatac aggtgcgccg tccccgcgaa caacaccgag aacaccgaca
     1621 ggcaggtatc caccgggtcg cggcctgtgt gaatcacacg cgcattcggc agcgccgcat
     1681 gaatcaggcc ggcatactga aaattccccg gcagcttgtc gacgatccga accgcacccg
//
LOCUS       DATAVD010001515         4162 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3119778, whole genome shotgun sequence.
ACCESSION   DATAVD010001515 DATAVD010000000
VERSION     DATAVD010001515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4162
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3119778"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..338)
                     /locus_tag="VHX39_29045"
     CDS             complement(36..338)
                     /locus_tag="VHX39_29045"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008121015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009039 - urease activity [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0043419 - urea catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit gamma"
                     /protein_id="HEX3995240.1"
                     /translation="MNLTPREKDKLLISMAAMVARRRLERGVKLNFPEAVALISDFVV
                     EGARDGRSVADLMEAGAGVLTRDQVMEGIPEMIHDVQVEATFPDGTKLVTVHEPIR"
     gene            complement(355..1191)
                     /locus_tag="VHX39_29050"
     CDS             complement(355..1191)
                     /locus_tag="VHX39_29050"
                     /inference="COORDINATES: protein motif:HMM:NF013899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HEX3995241.1"
                     /translation="MYDGVSLSDALQRATGECFVAVKRRGDASVLGGLRQAGCLKARF
                     PRPIAPGWFDVTTLNTSGGVVGGDRLCSRFSLGVDAHATITAQAAERFYRALPGSAAS
                     IVQTTLTIGPDAAAEWLPQETILFDRCSLDRRLIVDMAADAWFLGVEMLVFGRAAMDE
                     RVTSAWLRDLIQVRRGGDLLLHDAIRLDGEVDCMLHRTAIAGGARALATLVYVAPDAE
                     ARLDAVRAAADGMADFGASAWNGMLVTRILADTGAAARRAVVAALAVLRDGRPLPRVW
                     LC"
     gene            complement(1166..1861)
                     /gene="urtE"
                     /locus_tag="VHX39_29055"
     CDS             complement(1166..1861)
                     /gene="urtE"
                     /locus_tag="VHX39_29055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014457460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter ATP-binding subunit UrtE"
                     /protein_id="HEX3995242.1"
                     /translation="MLSVENVDLHYGAAIALRQVSLTAEVGAVTCLLGRNGVGKTSLL
                     RAIVGAHPITSGSIKWEGEEITRLPTYERARRGIAWVPQGRDVFPLLTVRENLETGFA
                     VLPRAEHKIPDEIFELFPVLQTMLRRRGGDLSGGQQQQLAIARALIMKPRLIVLDEPT
                     EGIQPSIIKDIGRVISLLRSRGGMAILLVEQYFDFAQELADTIVVLDRGDVVLSGRRE
                     ELNEADVRRRLSV"
     gene            complement(1862..2608)
                     /gene="urtD"
                     /locus_tag="VHX39_29060"
     CDS             complement(1862..2608)
                     /gene="urtD"
                     /locus_tag="VHX39_29060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003624677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter ATP-binding protein UrtD"
                     /protein_id="HEX3995243.1"
                     /translation="MTEADTLLYLDGVTVSFDGFRALNALSLVLEDGEMRAVIGPNGA
                     GKTTMMDVITGRTRPDMGTVVYQASTDLTKLDEPAIAALGIGRKFQKPTVFEPHTVWD
                     NLLLALAGDRRPKFSLWATETAAERGRIEEILETVRLKDQRERRGGELSHGQKQWLEI
                     GMLLAQEPRLLLVDEPVAGMTDAETEQTAELLREINQTRAIVVVEHDMAFVRALGVKV
                     TVLHEGSVLSEGSIDHVSEDPKVIEVYLGR"
     gene            complement(2605..3723)
                     /gene="urtC"
                     /locus_tag="VHX39_29065"
     CDS             complement(2605..3723)
                     /gene="urtC"
                     /locus_tag="VHX39_29065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtC"
                     /protein_id="HEX3995244.1"
                     /translation="MISQRVSTLTVALVLGFAILLAALNQFTPEASALHVPPYVIALV
                     GKYLCYAMLALAVDLVWGFSGILPLGHAAFFALGGYAMGMYLMRQIGTRGVYGDPNLP
                     DFMVFLGWKALPWTWYGFNWFPFAALMVVLVPGVLALVFGWLTFRSRVTGVYLSIITQ
                     ALTYALLLAFFRNDMGFGGNNGLTDFKDVLGFNVQSDATRSSLLVLTALFLCGAFLVA
                     RFLVQSRFGKVLIAVRDAESRTRFLGYRPESYKLVVWVLSAIMAGIGGALYVPQVGII
                     NPSEFAPANSIEAVIWVAVGGRGTLVGPILGALIVNFGKTWFTSALPEFWLFALGALF
                     IGVTLLLPQGVMGLFATRFVKPAVAPAPVISEEEEAPV"
     gene            complement(3720..>4162)
                     /locus_tag="VHX39_29070"
     CDS             complement(3720..>4162)
                     /locus_tag="VHX39_29070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014457462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtB"
                     /protein_id="HEX3995245.1"
                     /translation="FAFLVLAALMAALRFTSLGLRMRAVTQNRRMAAAMGIRTPWIDA
                     LTFGLGSGVAGMAGVALSQIDNVSPNLGQSYIIDSFMVVVFGGVGNLWGTTLGALTLG
                     IVNKFLEPVAGAVLGKIVVLILLILFIQRRPRGMFPLKGRAAEA"
BASE COUNT          909 a         1468 c         1120 g          665 t
ORIGIN      
        1 ccaggcatcg tgcgatccat gtgagacaaa cacaatcacc tgatcggctc atgcaccgtc
       61 accagcttgg tgccatccgg gaaagttgcc tccacctgca cgtcgtggat catttccgga
      121 attccttcca tcacctgatc gcgggtcagc accccggcgc cggcctccat cagatctgcc
      181 acggaacgcc catcgcgcgc cccttccacc acaaaatcgc tgatcagcgc cactgcttcg
      241 ggaaaattca gtttcacccc gcgctccagc cggcgccgtg ccaccattgc cgccatgctg
      301 atcagcagct tgtccttctc gcgcggcgtc aggttcatgc gattggtcct ctcctcaaca
      361 cagccatacc cgtggcagag ggcgcccgtc acgcaacacc gccaatgccg ccacgacggc
      421 ccgccgcgcc gcggccccgg tgtcagccag aatgcgcgtc accagcatgc cattccaggc
      481 gctggcacca aaatcagcca tgccatccgc agccgcacgc accgcgtcca atcgcgcctc
      541 ggcatccggc gccacataaa ccaacgtcgc aagggcccgc gcgccaccgg caatcgcggt
      601 tcgatgcagc atgcaatcga cctcgccgtc cagccggatc gcatcgtgca gcaacaagtc
      661 gccaccgcga cgcacctgga tcagatcgcg cagccacgcc gacgtcacgc gctcgtccat
      721 cgccgcgcgc ccaaacacca acatctcgac accgagaaac caggcgtcgg cagccatgtc
      781 gacgatcagc cgtcgatcga gcgaacaacg atcgaacagg atcgtctcct gcggtaacca
      841 ttccgccgct gcatcggggc caatcgtcaa tgtcgtctgc acgatcgacg cagcgctgcc
      901 cggcaacgcc cgataaaatc gctccgccgc ctgcgccgta atggtcgcat gcgcatcaac
      961 acccaaggag aatcgggagc acaaccggtc gccgcccacc acgccgcccg aggtgttcag
     1021 cgttgtgaca tcgaaccaac ccggtgcaat cggtcgcgga aaccgtgcct tgaggcatcc
     1081 agcctggcgt aatcccccca gtaccgaagc atcgcctcgc cgttttaccg cgacgaaaca
     1141 ttctcccgtg gcacgctgca acgcatcaga cagagagacg ccgtcgtaca tcggcctcgt
     1201 tcagctcctc acgccgcccg gacagcacca catccccccg atccagcacc acaattgtat
     1261 ccgccaattc ctgggcgaaa tcaaaatact gttccaccag caggatggcc atgccgcccc
     1321 ggctccgcaa cagcgagatc acccggccaa tgtccttgat gatgcttggc tgaatgccct
     1381 cggtcggctc atccagcaca atcagccgcg gtttcatgat caaagcccgc gcaatggcga
     1441 gctgttgctg ctggccaccc gacaaatctc cgccgcgccg ccgcagcatg gtttgcagca
     1501 ccggaaacaa ctcgaagatt tcatccggaa ttttgtgctc ggcgcggggc agcaccgcaa
     1561 acccggtttc cagattctcc cggaccgtca acaacggaaa cacgtcgcga ccctgcggca
     1621 cccaggcaat gccacgtctc gccctttcat aagtcggcag ccgggtgatt tcctctccct
     1681 cccatttgat cgaacctgat gtaatcggat gcgcaccaac gatcgcccgc aacaacgagg
     1741 tcttgccgac gccattgcgg ccaagcagac acgtcaccgc cccgacctcg gccgtcagcg
     1801 acacctggcg taaggcaatg gcagcgccgt agtgcaagtc gacgttttcc acgcttaaca
     1861 tttatcgccc cagatacact tcgatgacct tcgggtcctc ggagacatgg tcgatcgagc
     1921 cctcggacaa caccgagcct tcgtgcagta ccgtaacctt caccccaagc gcacgcacga
     1981 acgccatgtc gtgttcgacc accacgatcg cccgggtttg gttgatttcc cgcaacagtt
     2041 cggcggtttg ttcggtttcg gcatcggtca tcccggcaac cggctcatcg accagcagca
     2101 gccgcggctc ctgtgccagc aacatgccga tttccagcca ttgcttttgt ccatgcgaca
     2161 actcgccgcc gcgccgctcg cgttggtctt tcagccggac ggtttccagg atttcttcaa
     2221 tgcggccgcg ctcggcggca gtttcggtag cccagaggct gaacttcggc cgccggtctc
     2281 cggccagagc cagcaagaga ttgtcccaga ccgtatgcgg ctcgaacacc gtcggcttct
     2341 ggaatttgcg gccaatgccc aacgcggcga tggcgggctc gtcgagtttc gtcagatccg
     2401 tgctggcctg gtacaccacg gtgcccatat ccggccgggt ccgtccggtg atgacatcca
     2461 tcatcgtagt cttgccggcg ccgttcggac cgatgaccgc gcgcatctcg ccgtcttcca
     2521 acaccagcga cagcgcattc aacgcacgga acccgtcaaa gctcaccgtc acaccgtcga
     2581 ggtaaagcag cgtatcggct tcggtcatac cggcgcttcc tcctcttccg agatgacagg
     2641 tgccggcgcc accgcaggtt tgacgaaccg tgtggcgaac aggcccataa cgccttgcgg
     2701 cagcagcagc gtgacgccga taaacaaggc acccagtgca aaaagccaga attccggcag
     2761 tgcgctggta aaccaggttt tgccgaagtt cacgatcaat gcaccgagga tcggacccac
     2821 cagagtgccg cggccgccga ccgcgaccca gatcaccgcc tcgatcgagt tggccggtgc
     2881 gaactcgctc gggttgatga tgccgacctg cggcacgtag agcgcgccgc cgatgccggc
     2941 catgatcgct gacaaaaccc agaccaccag cttgtaggat tccggccggt agccaagaaa
     3001 ccgggtgcgc gattcagcgt cgcgtaccgc gatcagcacc ttgccgaagc gagactgcac
     3061 caggaagcgc gccaccagaa acgcgccgca cagaaacaat gccgtcagca ccagcaggct
     3121 tgaccgcgtg gcgtccgatt gcacgttgaa gccgagcaca tccttgaaat cggtgaggcc
     3181 gttgttgccg ccgaagccca tgtcgttgcg gaagaacgcc agcagcaacg cataggtcaa
     3241 cgcctgggtt atgatcgaca gataaacccc ggtgacccga gagcgaaacg tcaaccagcc
     3301 gaacaccaac gccagcacgc cgggcaccag caccaccatc agcgcagcaa acggaaacca
     3361 attgaagccg taccaggtcc atggcaaggc tttccaacca agaaacacca tgaaatcggg
     3421 caaattcgga tcgccgtaga caccgcgcgt gccgatctgg cgcatcaaat acatgcccat
     3481 cgcgtaacca ccgagggcga agaaagcagc atggccaagc ggcaaaatgc cactgaaccc
     3541 ccacaccagg tcgaccgcca gcgccagcat cgcgtagcat agatatttac cgaccagcgc
     3601 gatcacataa ggcggcacat gcagcgccga agcctccggc gtgaactgat tgagggcggc
     3661 cagcaggatc gcaaagccca gtaccaaagc gaccgtcaga gtggagaccc gctggctgat
     3721 catgcctcgg ccgcccgtcc cttgagcggg aacatgccgc gcggacgccg ctggatgaac
     3781 aggatcagca ggatcagcac gacgatcttg ccaagcacgg cgccggccac cggctccagg
     3841 aatttgttga cgatgcccaa cgtcaaggca cccagagtgg tgccccagag gttaccgaca
     3901 ccgccaaaca ccacgaccat aaagctgtcg atgatatagc tctggccgag attgggggac
     3961 acgttgtcga tctgcgacag cgcgacgccc gccatgccgg ccacgcccga ccccagaccg
     4021 aaggtcaacg catcgatcca cggggtacgg atgcccatcg ctgccgccat gcggcgattt
     4081 tgcgtcaccg cgcgcatgcg caggccaagc gaggtgaagc gcaacgccgc catcagcgcg
     4141 gccagcacaa ggaacgcgaa ca
//
LOCUS       DATAVD010001516         2285 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1073407, whole genome shotgun sequence.
ACCESSION   DATAVD010001516 DATAVD010000000
VERSION     DATAVD010001516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1073407"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1000)
                     /locus_tag="VHX39_29075"
     CDS             complement(<1..1000)
                     /locus_tag="VHX39_29075"
                     /inference="COORDINATES: protein motif:HMM:NF020036.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEX3995246.1"
                     /translation="MSQPKPQPRADLGNPRSGTACQPVQQTQDPIPASTGDGDDLLAL
                     VQEAGGLGIFEWHVPSGTVRLSPKLQTLYGLTEFDGRHESWLRCVFREDVMRMTNTIA
                     EAFASGVTEFVDAFRILRPGEDAPRWMEAHSIVIYDNEQRPARLVSVSVDVTERKRAH
                     VQLHAFTEALEERVKARTRELEAENEARMRAEESLRQAQKMEVVGQLTGGLAHDFNNL
                     LTIVMGGLDIIENQIPRLPPSQATQRIARARKLALEGVGRAAKLTQRLLAFARQQPLT
                     PQPLDVDTLVSEVSDLLRRTIGETIVLQTITTSGLWPTLADPNQLENVLLNLAINAR"
     gene            complement(1084..2136)
                     /locus_tag="VHX39_29080"
     CDS             complement(1084..2136)
                     /locus_tag="VHX39_29080"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995247.1"
                     /translation="MIRYQKYATTVIGAYSVPDWYEALDRLVAVGQLSMGALADAQFR
                     AGEAAVHDQELAGIDVITDGEMHRRTHNRHSPPNAMLNFFWQKIPAFQGSTRPRSITP
                     HDQEVFHPAATCRDRILETTDLGLVDEFVTAAQLTQKPVKIAMTGPHMLAKVAYDEHY
                     HDLPKMMLDLGKLLRRNFLRLAEAGCRNIQIDEPLFTMSGEDEVAAAVDAINLAIEDL
                     PPEVHVSMHICQGNYAVGKEYDGQIGHRYFDGGRYKADKICQIGCAAYLVEYDMAYHF
                     EGVLGDRQLGVGAVDVQDPKVESGDLVASRIRLLNWLAPEQTIITSSCGFNHLPRRTA
                     FGKLLAMTEAKRILAA"
BASE COUNT          446 a          704 c          655 g          480 t
ORIGIN      
        1 cgcgtgcatt gatcgcgaga ttcagcaaca cattctcaag ctggtttgga tccgccagcg
       61 tcggccacag cccgcttgtc gtaatggttt gcagcacgat cgtttccccg atcgtgcgcc
      121 gcaacaaatc ggagacttca ctgaccaaag tatccacatc gagcggttgc ggcgtcaacg
      181 gctgttgccg cgcaaaggcc agcaatcgct gcgtaagctt ggctgcgcgg ccaaccccct
      241 cgagcgcaag tttccgcgcg cgagcgatcc gttgcgtcgc ctgcgaaggc ggcaaccggg
      301 ggatttggtt ctcgatgata tcgagaccgc ccatcacgat cgtcaataaa ttgttaaagt
      361 cgtgtgccag accgccggtg agttgtccga ccacctccat cttctgagcc tggcgcaagg
      421 attcctcggc gcgcattcgg gcttcgtttt ccgcttccag ctcccgcgtg cgggctttga
      481 cgcgctcctc caacgcttcg gtgaaggcat gcaactggac atgggcgcgc ttgcgctcgg
      541 tcacatcgac gctgacgctg acgaggcggg ccggccgttg ctcgttgtcg tatataacga
      601 tgctgtgcgc ttccatccag cgcggcgcgt cctcgccggg acgcaggatg cggaatgcat
      661 cgacgaactc ggtcaccccc gaggcaaacg cttccgcaat cgtattggtc atgcgcatca
      721 cgtcttcgcg aaacacgcaa cggagccagc tttcgtgccg gccatcgaac tcggtcagtc
      781 cgtacagcgt ttgcagctta ggcgacaggc ggaccgttcc actcgggaca tgccactcga
      841 atattccgag gccgccggct tcctggacca gagcgagcaa atcgtcgcca tcgccggtgg
      901 acgcagggat cgggtcctgg gtttgctgaa cgggctggca ggctgtgcca gaccgcggat
      961 tgcccaggtc tgcccggggc tgtggctttg gctggctcat ggcatattaa taaggcgcca
     1021 ctacggggtg tggttccgtc tgccggacca tttcgcccag gatcgtttcg ccaatgtggg
     1081 ccgtcacgcc gccagaatcc gtttggcctc ggtcattgcc agcagttttc cgaatgcggt
     1141 gcggcgcggc agatgattga agccacatga actggtgatg atggtttgct caggcgcgag
     1201 ccagttcagt agcctgatgc ggcttgccac caggtctccg gactcgacct tgggatcctg
     1261 cacgtcgacg gcacccacgc cgagttgccg gtcgcccaaa acgccttcga aatgatacgc
     1321 catgtcgtat tcgaccagat aagccgcgca gccaatctgg caaatcttat ccgctttgta
     1381 gcgtccgcca tcgaaataac ggtggccgat ctgcccgtcg tattctttgc cgaccgcata
     1441 attgccctga catatatgca tcgaaacatg gacctccggc ggcaggtcct cgatcgcgag
     1501 gttgatcgca tcgactgccg cggcgacctc gtcttcgccg gacatggtaa acagcggctc
     1561 atcgatttga atattccggc acccggcctc agccagccgc aagaaattac gtcgcaataa
     1621 cttgcccaga tccagcatca ttttcggcag atcgtggtaa tgttcgtcgt acgccacttt
     1681 ggcgagcata tgcggcccgg tcatggcgat cttcaccggc ttctgggtca attgtgcggc
     1741 cgtgacaaat tcatcaacga ggccgagatc ggtcgtctcc aaaatgcgat cccggcaggt
     1801 ggcggcgggg tgaaacactt cctgatcgtg cggcgtgatc gaccggggcc gggtactgcc
     1861 ctgaaacgcc gggattttct gccagaaaaa attgagcatc gcattcggcg gcgaatgccg
     1921 attgtgcgtg cgccggtgca tctccccatc ggtgatgacg tcgatcccgg ccagttcctg
     1981 atcatgaact gccgcctcac cggcgcggaa ctgagcgtca gccagcgcac ccatggaaag
     2041 ctggccaaca gcgaccaggc gatccagtgc ctcataccaa tcagggacgc tgtacgcgcc
     2101 aatcaccgtc gtggcatatt tttggtacct gatcatcgtt aggtcaccac aagcccactc
     2161 gaccccctgg gccgctttgc ccacattccg ccggaagaaa taaatttctc ataaagttcg
     2221 ggacgttttg cagcagtatc aggcccgctg caaaacgtaa agaaccgcgt attgacaatt
     2281 gccag
//
LOCUS       DATAVD010001517         1628 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3305634, whole genome shotgun sequence.
ACCESSION   DATAVD010001517 DATAVD010000000
VERSION     DATAVD010001517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3305634"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /locus_tag="VHX39_29085"
     CDS             <1..351
                     /locus_tag="VHX39_29085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEX3995248.1"
                     /translation="ARAVPNTVLINPEIEPIGEEIGLNWEGCLSIPEMRAVVPRALRI
                     RYRGVDCDGNVVEGEAQRFHARVMQHENDHLDGILYPMRVTDFRYFGFNAELDRAAEE
                     RRRQQQEQQQADGQ"
     gene            348..959
                     /locus_tag="VHX39_29090"
     CDS             348..959
                     /locus_tag="VHX39_29090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="COQ9 family protein"
                     /protein_id="HEX3995249.1"
                     /translation="MIRPPERLAERDAAIEAMLPNVPFDGWTVRALRSGLAAAGLPED
                     DAAILFPGGAADMIAVFCDLADRRMSDAAAGLSETTLSGRVQAIIRQRLTMNRPHKEA
                     IRRAVSVLALPGNARTAAAITARTVDAIWHAAGDRSADFSWYTKRAILTAVYGATLLF
                     WLRDTSEDDADTRAFLARRMQGVGRLLKARNRAGGWLGRLRPA"
     gene            1129..>1628
                     /locus_tag="VHX39_29095"
     CDS             1129..>1628
                     /locus_tag="VHX39_29095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEX3995250.1"
                     /translation="MTNTPTDHIRNFAIIAHIDHGKSTLADRLIQYTGALTDREMTNQ
                     VLDSMELERERGITIKAQTVRLSYKATNGETYELNLMDTPGHVDFAYEVSRSLAACEG
                     SLLVVDASQGVEAQTLANVYQAIEANHEIVPILNKIDLPAAEPDRVKQQIEDVIGLDA
                     SDAVEI"
BASE COUNT          312 a          541 c          530 g          245 t
ORIGIN      
        1 gcccgcgcgg tgcccaacac cgtcctgatc aacccggaaa tcgaaccgat cggcgaggaa
       61 atcggcctga actgggaagg ctgtctgtcg atccccgaga tgcgcgccgt ggtgccgcgc
      121 gcgctgcgga tccgctaccg cggggtcgac tgcgacggca acgtggtcga aggcgaggcg
      181 cagcgcttcc acgccagggt catgcagcac gaaaacgacc atctggacgg cattctctac
      241 ccgatgcggg tgaccgattt ccgctacttc ggcttcaatg ccgagctcga tcgtgcggcg
      301 gaggaacggc gccggcaaca acaggaacag cagcaggcgg acggccagtg atccgcccgc
      361 cggaacgcct ggccgagcgg gatgccgcga tcgaggcgat gttgcccaac gtgccgttcg
      421 acggttggac cgtccgcgcg ctgcggtccg gcctcgctgc ggccggcctg ccggaagacg
      481 atgcggccat cctgttcccc ggcggcgctg ctgacatgat cgccgtgttt tgcgatcttg
      541 ccgaccggcg catgagcgat gcggccgccg gcctgtccga aacgacactg agcggccggg
      601 ttcaggccat catccggcag cgtctgacga tgaaccggcc gcacaaggag gcgatccgac
      661 gggccgtctc cgtgttggcg ctgcctggca acgcccgcac agcagcggcg atcaccgccc
      721 gcacagtgga cgcaatctgg cacgccgcgg gcgatcggtc cgccgatttc agttggtata
      781 ccaaacgcgc gatcctgacc gcggtttacg gggccacgct gctgttctgg ctgcgcgaca
      841 ccagcgagga cgatgcagat acgcgcgcat tcctcgcccg ccgcatgcaa ggggttggcc
      901 gcctgctgaa ggcacgcaac cgcgctggtg gctggctcgg acggctgcgc ccggcatagc
      961 cgggaccaca ccgacctctg gcactccttg acctgggcgt tggctggcgt ggaccgaagt
     1021 gccaaccacc catccgatgg atgacatcgc gctgcacaac gtctatcagg ggacgcattc
     1081 ggagggtcac cgtctgaccc ctgacgaccg gacaacctac agccagtaat gaccaacacg
     1141 ccgaccgacc atatccgcaa ctttgcgatc atcgcccaca tcgaccacgg gaaatccacc
     1201 ctggccgacc ggctgatcca gtacaccggc gctctgacgg atcgcgagat gaccaaccag
     1261 gtgctcgaca gcatggagct ggagcgcgag cgtggcatca cgatcaaagc gcagaccgtc
     1321 cgcctgtcgt acaaagcgac gaacggcgag acctacgagt tgaacctgat ggacacgccg
     1381 ggtcacgtcg acttcgcgta tgaagtcagc cggagtctcg ccgcctgtga gggctcgctg
     1441 ctcgtggtcg atgccagcca gggggtggag gcgcagacac tcgccaacgt ctatcaggcg
     1501 atcgaggcga accacgaaat cgtaccgatt ctgaacaaga tcgacctgcc ggcggctgag
     1561 ccggaccgcg tgaagcaaca gatcgaggat gtgatcgggc tcgacgcgtc cgacgcggtg
     1621 gagatcag
//
LOCUS       DATAVD010001518         2221 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_516768, whole genome shotgun sequence.
ACCESSION   DATAVD010001518 DATAVD010000000
VERSION     DATAVD010001518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_516768"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..504)
                     /locus_tag="VHX39_29100"
     CDS             complement(<1..504)
                     /locus_tag="VHX39_29100"
                     /inference="COORDINATES: protein motif:HMM:NF025114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX3995251.1"
                     /translation="MRSIAAIVIGAGQAGLAMSHCLTERGIEHVVLERGRTAERWYSE
                     RWASLRLLTPNWMSRLPGWSYEGEAPDGFMSAMSFARYLEAYETTARLPVEHDTVVMS
                     VEPHAGGFRVTTDRGVWLARIVVMATGHCDVPHVPPMAWQLPASILQITPTTYWNPAG
                     LPNYGVLV"
     gene            complement(570..1166)
                     /locus_tag="VHX39_29105"
     CDS             complement(570..1166)
                     /locus_tag="VHX39_29105"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEX3995252.1"
                     /translation="MATQVATNQTPVRKAPPVPRNGVDTPKLFATIGAVAAQTSLALF
                     QFRAESRWMNGTHTHTAICTFYGAGAEMTHAATFEADADHPAVLCGHDLAPSPVEWLL
                     HGLAGCLTAGIANISAARGVTLNTVECSLEGDIDLQGILGLSHDIRNGFQAVRVGFRI
                     DAEASAEKIAEIVGQAQSRSAVLDIMTNGVPVFVSVNT"
     gene            complement(1432..>2221)
                     /locus_tag="VHX39_29110"
     CDS             complement(1432..>2221)
                     /locus_tag="VHX39_29110"
                     /inference="COORDINATES: protein motif:HMM:NF025878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX3995253.1"
                     /translation="SGTSGHFMRTRSLLSDSRDDYVLTTAISDDVIVTRGSNAIRLRE
                     SQMCLMNMSMEGGVGLNDGNRFTSTRIPRAALLAMCPSADDRLYRAIDESQHIRELIV
                     QYSALSANTAASLDAVGQQAMAGHMIDLVALLLRTGQDETQLATERGYAAARLRSVQQ
                     HVLQHLSDGGLAVGSIAQSCGLSPKQVQRLFERAGTTFTEFVLEQRLLLARRLLASPG
                     NRQDKIGTIAYNAGFGDLSYFNRTFRGRFGMTPSEWRNAQPEHS"
BASE COUNT          436 a          680 c          701 g          404 t
ORIGIN      
        1 gaccagcacg ccataattcg gcaggccggc tgggttccag taagtggtcg gcgtgatctg
       61 caggatcgat gccggcaact gccacgccat cggcggcacg tgaggaacgt cgcaatggcc
      121 ggtcgccatg acaacgattc gtgccaacca gacaccgcga tccgtggtga cccgaaaccc
      181 gccggcgtgc ggttcgaccg acatcacaac ggtgtcgtgc tcgaccggaa ggcgtgcggt
      241 cgtttcgtag gcttcaaggt accgggcaaa gctcatggcc gacatgaagc cgtccggagc
      301 ttccccctca taggaccaac ccggcagccg gctcatccaa tttggcgtga gcaagcgtaa
      361 cgaagcccag cgctcgctgt accaacgttc ggcggtgcgg cctcgctcga ggacgacgtg
      421 ctcgatgcca cgttcggtca ggcagtggct catggcaagg ccggcctggc cggcgccgat
      481 gacgatggca gcgatggacc gcatgggatc ctcctgtgtt ggagcggcgg gcggcggacg
      541 ttacaagaac cgccgtcgcc gacatggaac taagtattta ccgaaacgaa aaccggtacg
      601 ccgttggtca tgatgtccag aactgccgat cggctctgag cctggccaac gatctcggcg
      661 attttctcag cggatgcctc ggcgtcgatc cggaaaccca ccctgacggc ctggaaaccg
      721 ttacggatgt cgtgcgacag gccgagaatg ccttgcaggt cgatatcgcc ctcgagcgaa
      781 cattcgaccg tgttgagggt gacgccacga gcggccgata tattcgcgat gccggcagtg
      841 aggcagccgg cgagaccatg cagcagccac tcgaccggtg atggtgccag gtcatgaccg
      901 cacagcaccg cggggtggtc ggcatcggcc tcaaacgttg cggcatgcgt catttcggcg
      961 ccggcaccat agaatgtgca aatggcagta tgggtgtgcg tcccgttcat ccaccggctt
     1021 tcggcacgaa actgaaacag cgccagcgag gtttgcgcgg cgaccgctcc aatcgttgcg
     1081 aacagctttg gcgtgtcgac accgttgcgc ggcaccggcg gcgctttcct gacgggtgtt
     1141 tggttcgttg caacttgcgt agccatgatc gatctccttc gtagttcagg tgaggtttgt
     1201 gcgatccgac ctgggcggct ggcagaagag ccgcggcgga acgaaacgaa agaacaccat
     1261 ttcgttcgca acggtcttgg gccacgagga caatcgtgcg gcttacgtgg acataacggg
     1321 tcggctgtcg cagcgcccgc acggaacggt tcgccgcaac gtatgccgcg cattcagacc
     1381 ggggaatcgc tcaggcgcgc agcccggcgg acgtcacgct gttacggagc gtcaggaatg
     1441 ttccggttgc gcgttgcgcc attcggacgg tgtcataccg aaccgaccgc ggaacgtccg
     1501 attgaaatac gacaaatcgc cgaaccccgc attgtaagca atcgtaccga tcttgtcctg
     1561 acggttaccc gggcttgcca gcaaccggcg cgccagcaac agccgctgtt cgagcacaaa
     1621 ctcagtgaac gtggtgccgg cccgttcgaa cagccgctgt acctgcttgg gtgaaagccc
     1681 gcagctctgc gcgatcgagc cgaccgccag gccgccgtcg ctcaaatgtt gcagcacatg
     1741 ctgctgcacc gagcgcaggc gcgccgcggc atatccgcgc tcggtggcaa gctgggtttc
     1801 atcctggccg gtccgcagca gcagagcgac caggtcgatc atatgaccgg ccatcgcctg
     1861 ctggccgaca gcatccagcg atgccgccgt gtttgcggat aatgcggaat attgcacgat
     1921 gagttcgcgg atatgttgac tttcatcaat agcccgatag agcctgtcgt cggcactcgg
     1981 gcacatcgca agcaacgccg ccctcgggat gcgggtggag gtgaatcgat tgccgtcgtt
     2041 gaggccaacg ccaccttcca tgctcatgtt catcaggcac atctgtgact cccgcaggcg
     2101 gattgcattg ctgccgcggg taacgatcac atcatccgaa atcgctgtgg tgaggacgta
     2161 gtcgtcgcgc gagtcggaca acaagctgcg cgtccgcata aagtggcccg acgtgccgct
     2221 g
//
LOCUS       DATAVD010001519         2091 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2377001, whole genome shotgun sequence.
ACCESSION   DATAVD010001519 DATAVD010000000
VERSION     DATAVD010001519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2377001"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VHX39_29115"
     CDS             complement(<1..268)
                     /locus_tag="VHX39_29115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995254.1"
                     /translation="MKYNLLGAVSTLAMGAALGLTVVAPASATVINETDSWSYGPPTY
                     AGKQSLSFAGFSTPGTLNSVVVTYTINSDQISNNATGSGSPGTAT"
     gene            590..>2091
                     /locus_tag="VHX39_29120"
     CDS             590..>2091
                     /locus_tag="VHX39_29120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEX3995255.1"
                     /translation="MTDYLALLNEEQRQAVEALDGPLLVLAGAGTGKTRVLTTRFAHI
                     LLSKKAFPNQVLAVTFTNKAAREMRERVAAILGQPAEGLWLGTFHALCARMLRRHAEH
                     VGLSGNFTILDTDDQLRLLKQVMDAQRIDTKRWTPGSIMALIQRWKDRGLTPGRVGIE
                     ASDDATSVAREVYAAYQARLLTLNAADFGDLILHVTEILRTQPDILAQYHRNFRYILV
                     DEYQDTNLVQYLWLRLLAQGHRNICCVGDDDQSIYSWRGAEVENILRFEKDFEGAKIV
                     RLESNYRSTAPILAAASTLIAHNAGRLGKTLRVGRKDAASGEKVSVVGLWDSEEEARM
                     IGERIERFRRDGQPLSEIAVLVRAGFQTRAFEERLIVLGVPYRVVGGLRFYERQEIRD
                     AIAYMRAMSRPADDLAFERIVNVPRRGVGDSGLRAMHELARADGLPLSRAAARLVETG
                     GIKGKARNALEELFRGLAAWHGMLERDGHVVTVATMLDESGYTEMWKQDKS"
BASE COUNT          405 a          629 c          654 g          403 t
ORIGIN      
        1 tggtggcagt gccgggcgac ccggagccag tcgcgttatt tgaaatctga tcgctgttga
       61 tcgtgtaggt caccacaacc gagttcaatg tgccgggcgt ggagaaccca gcgaaactca
      121 ggctttgttt gcccgcgtag gttggcggac cataggacca ggagtcggtt tcgttgatga
      181 ccgtcgcgga cgcaggagca accacggtca ggccgagtgc cgctcccatc gcgagggtgc
      241 tcaccgcacc gagaagattg tacttcattg atgtgcctat cccgttccaa aaaacattga
      301 tgcgccggct tgcggtgcca tctcccaggt atgaagcaac gctcatgcca accgagaacc
      361 gcattgcgct tcaatggttt accaatcggt cggactgcag ccggagatag aatgtaaggc
      421 gcaccttaca cccggccgat ccggtccgga tgacgacccc cggcgcgtgc cgcagcctcg
      481 aaatcccggt atcggaaacc cacctggatt ggccggactc caccgccggc gcatagtctc
      541 tccgtgatgc cgctcacatc cccaccagag cccagtacgg attgcccgca tgaccgatta
      601 ccttgcactg ctgaacgagg aacagcgcca ggccgttgaa gccctggatg ggcccctgct
      661 cgttctggct ggcgccggga ccggcaaaac ccgtgtgctg accacccggt tcgcccatat
      721 tctgttgagc aagaaagcgt tcccgaacca ggtcctggcc gtcaccttca ccaacaaggc
      781 agcgcgtgag atgcgcgaga gggtcgctgc catccttgga cagccggccg aaggcctctg
      841 gctcggcacc ttccatgcgc tctgcgcgcg catgctgcgc cgccacgccg agcacgtcgg
      901 gctgtcggga aactttacaa tcctcgatac ggacgatcag cttcggctgt tgaaacaggt
      961 gatggacgcc cagaggatag acacgaagcg gtggacgccg ggctcgatca tggcgctgat
     1021 tcagcgctgg aaggaccgcg gtctgacccc tgggcgggtg ggtatcgaag cgtcggacga
     1081 tgcaacgtcc gtggcgcgtg aggtctatgc cgcgtaccag gcccggttgc tgaccctgaa
     1141 tgccgctgac ttcggcgatc tcattttgca tgtgacggag atcctgcgga cccagccgga
     1201 tattctggcc cagtaccatc gaaattttcg ttacatcctc gtagacgaat accaggatac
     1261 caacctcgtt cagtatctct ggctacggct gctggcacag gggcatcgga atatttgttg
     1321 cgtcggtgat gacgatcagt cgatctattc ctggcgcggc gccgaggtgg aaaatatcct
     1381 gcgattcgag aaggatttcg agggtgcgaa aattgtccgg ctggaatcga attatcgttc
     1441 cactgcacca attctcgccg ctgcctccac cctgatcgcc cacaacgccg gccgactggg
     1501 caagaccctg cgtgtcggac ggaaggatgc agcgagcggc gagaaagttt cggtcgtggg
     1561 tctatgggat tctgaagaag aggcccgcat gatcggcgaa cggatcgaac ggtttcgccg
     1621 cgacggtcag ccgctgagtg aaattgccgt gctggtgcgc gccggcttcc agacccgcgc
     1681 gttcgaggaa cggctgatcg tgcttggcgt gccgtatcgt gttgtcggcg gcctgcgctt
     1741 ttacgagcgc caggaaatcc gcgacgccat cgcctatatg cgcgccatgt cgcgaccggc
     1801 agatgatttg gcattcgagc ggatcgtcaa tgtgccgcgc cggggtgtgg gcgattccgg
     1861 cctgcgcgcc atgcacgaac ttgcccgcgc cgacggcctg cccctgtcgc gcgctgccgc
     1921 tcggttggtc gaaaccggcg ggatcaaagg caaggcgcgt aacgcgttgg aggaactgtt
     1981 ccgcggcctc gccgcatggc acggaatgct ggaacgcgac ggccatgtcg ttactgtggc
     2041 gacgatgctg gacgagagcg gctacaccga aatgtggaag caggacaaat c
//
LOCUS       DATAVD010001520         2168 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1261635, whole genome shotgun sequence.
ACCESSION   DATAVD010001520 DATAVD010000000
VERSION     DATAVD010001520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1261635"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..365
                     /locus_tag="VHX39_29125"
     CDS             <1..365
                     /locus_tag="VHX39_29125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995256.1"
                     /translation="AMAIPATLMPLMPTPTLMAALLFPIKFLGGFSPVLIPSAIQLAC
                     PANLRAQMGALFMFTVGIIGVSLGPLVPALLSEYVFRDEGALRYSLAVAAVVVAPTAW
                     AILRWGSREYRQRLLEQP"
     gene            365..1498
                     /locus_tag="VHX39_29130"
     CDS             365..1498
                     /locus_tag="VHX39_29130"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEX3995257.1"
                     /translation="MEPILGLQTPAALLEATRFELNCADMLARVRKLGTRLRPHMKTL
                     KSIEAARVAIDPQHGGIAVATLNEARYFIGNGIRDVCYAVCPSPDKLHAIAELAATGC
                     SFFIDTIELAQRLTGHEAPLHGAPFRVWIEVDCGEHRTGIEPDDAALVEVARLVEGCP
                     HTELVGVATHAGQSYRCRSIDEIKTVARQERVAACEAAQRLRDAGFDIPQVSIGSSPT
                     AVWTDSTAGITELRAGVYMAGDLVQSVLGTLPLDRVAFSVLATVTSVHPKQHRVIIDA
                     GGLALSKDRGTSATVRDYGYGLVLDAHGNPAYGELTVTDVHQEHGEILRVPDDVMEKL
                     SLGTKVRVIPNHVCMTAAMYDRLNVVDSSAGVVTALWKRTNGW"
     gene            1545..>2168
                     /locus_tag="VHX39_29135"
     CDS             1545..>2168
                     /locus_tag="VHX39_29135"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEX3995258.1"
                     /translation="MADRNSAASPDLQGEGPFRRHLGLGKLTAMGVAAIIGGGIFVLT
                     GTAAANYAGPGVAVSFILAGFACFFAALCYAELASTMPAAGSAYTYALATMGRIVGWS
                     VGWTLILEYLFATATVAVGWSGYLGALLGQVGFSLPGGWHSSPLSFSAQRGWSLSGAV
                     INLPAALIVFALSGVLARGIRGSSLTWTVLTVIKVVVVLLVIGFGALH"
BASE COUNT          333 a          661 c          711 g          463 t
ORIGIN      
        1 ctgcaatggc catccctgcg acgctcatgc cgctgatgcc caccccaact ctcatggcgg
       61 ccctgctgtt ccccatcaaa ttcctgggcg gattctcacc ggtgctgatt ccaagcgcga
      121 tccagttggc gtgtccggcg aacttgagag cgcaaatggg cgcgttgttc atgttcactg
      181 tcgggatcat cggcgtcagc ctcggacccc tcgtgcctgc gctcctcagc gagtacgtgt
      241 ttcgcgatga gggggcgttg cgttactccc tcgccgtagc ggcggtggtg gtagcgccga
      301 ccgcgtgggc cattctgcgc tggggctcgc gggaatatcg tcagcgtctg ttggagcaac
      361 cgtgatggag ccgattctcg gcctgcaaac tcctgccgcg ctgctcgaag cgacccggtt
      421 cgaactgaac tgcgccgaca tgctcgctcg cgtccggaag ctggggaccc gcctgcggcc
      481 gcacatgaag acgttgaagt ccatcgaggc ggcgcgtgtg gccatcgacc ctcagcatgg
      541 cggcatcgcg gtggccacct tgaacgaggc gcgctacttc attggcaacg ggatccggga
      601 tgtgtgttac gccgtttgtc cgtcccccga caagttgcat gccattgcgg agttggccgc
      661 gacgggctgc agtttcttta tcgacaccat cgagttggcg cagcggctca ccgggcacga
      721 ggcgccgctg catggggcgc catttcgggt gtggatcgag gtcgattgcg gtgagcatcg
      781 taccgggatc gagcctgatg atgccgcgct ggttgaagtc gcccggctcg tcgagggctg
      841 tccgcacacc gagctcgtgg gtgtcgccac acacgccggt caaagttacc ggtgccgctc
      901 gatcgatgag ataaaaaccg tcgcgcgcca ggagcgcgtg gccgcttgcg aggcagcgca
      961 acgcttgcgc gacgccggtt tcgacattcc gcaagtcagt atcgggtctt ctcctaccgc
     1021 tgtatggact gattcgactg cggggatcac ggagcttcgt gccggggtct acatggccgg
     1081 tgacctcgtg cagtccgtgt tgggaacctt gcccctcgac cgagtggcct tctcggttct
     1141 cgccaccgtg acgagtgtgc atccaaagca acaccgggtc atcatagatg ccggcggtct
     1201 cgcgctctcg aaggatcgcg gcacgtccgc aaccgtacgg gattacggct acggcctcgt
     1261 gctggacgct cacggaaatc ccgcatacgg cgagctgacc gtcaccgacg tgcatcagga
     1321 gcacggtgag atcctccgtg tgcctgacga tgtcatggaa aaactgtccc tcggcacgaa
     1381 ggtgcgcgtc attcccaacc atgtctgtat gacggccgcc atgtatgacc gtttgaacgt
     1441 ggtcgatagt tcggcgggcg tcgtcaccgc cctgtggaag cgaacgaatg gctggtgatc
     1501 aaggcgccct cgccgaccga agcgccatag ccgagcggag ctccgtggcg gatagaaact
     1561 ccgcggccag tcccgacctg caaggagaag ggccattccg ccgccatctg gggctgggga
     1621 aactcacggc catgggtgtt gccgccatca ttggcggcgg tattttcgtg ctcaccggga
     1681 ccgcggcggc gaactacgcg ggtcccggcg tcgctgtgtc tttcattctt gcgggctttg
     1741 cctgtttctt tgcggccctg tgttatgccg agctggcctc gacgatgccc gcggcgggga
     1801 gcgcatacac ctatgcgctg gcgacgatgg gacggattgt cggatggtcg gtgggttgga
     1861 cgttgatatt ggagtatctg ttcgcaacgg caactgtcgc ggtcggttgg tctggttacc
     1921 tgggcgcatt gttgggtcag gtcggattca gcttgcccgg cggctggcac agctcgccgc
     1981 tgtccttttc cgcgcagagg ggctggtcgc tctcgggcgc cgtcattaac cttccagccg
     2041 ctttgatcgt tttcgccttg agtggtgtgc tggcgcgtgg catccgcggg tcttccctga
     2101 cctggactgt gctgaccgtc atcaaagtcg tcgtcgtgct gctggtgatc ggtttcggag
     2161 cgctccac
//
LOCUS       DATAVD010001521         1578 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3495045, whole genome shotgun sequence.
ACCESSION   DATAVD010001521 DATAVD010000000
VERSION     DATAVD010001521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3495045"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..822
                     /locus_tag="VHX39_29140"
     CDS             <1..822
                     /locus_tag="VHX39_29140"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX3995259.1"
                     /translation="LLFPGAEVARIDIKPMPEEIGVIPGLYVQGDALRTVTSLNEALE
                     SRQVRSEGFRNAATRAVLEEPAHQFEHPKDGLDPRAVGGYLARGLPKGVLVTCGAGHF
                     FSFPAMYMALPEGAEIQFSYQFGAVGQGLPLAIGTGAGNPGRPHVAIEGDGSLLFHIQ
                     ELDTVTRFKMQMVLIVWNDGGYGAEVHKLLPKGFEWGQAHWDSPDFVAIAKAFGGDGV
                     KLERESDLPAAVTQGLKQGGLYLIDVRVSPTTTSDPHGKVYYGIPSKAPLLRPVA"
     gene            823..1422
                     /locus_tag="VHX39_29145"
     CDS             823..1422
                     /locus_tag="VHX39_29145"
                     /inference="COORDINATES: protein motif:HMM:NF017999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEX3995260.1"
                     /translation="MPMHFEGEFRVPGKAEDVIRRFSDVPRMARCMPGAVLEQQAEDG
                     SWPGKMVVSFGPKKINFKGKATCDFDFQALTGTVHGRGAADMRSARIGVKVSFELADA
                     PGSPPETSVKIVSDAELGGVLEDFAKTGGIAVANVIMADFARRAADEFAKDAPPPEAA
                     TEVQAPAAPLQANSLMWVVIKAYWHRFLQAIGLERQPSI"
BASE COUNT          305 a          453 c          518 g          302 t
ORIGIN      
        1 ttgttgttcc ccggcgccga ggtagcccgt atcgatatca aaccgatgcc cgaagaaatc
       61 ggagtcattc cgggtctgta cgtgcaaggt gacgcactta gaaccgtgac aagtctgaac
      121 gaggcgctgg aaagccggca agtgcgcagc gaaggattcc gcaacgccgc cacgcgagcg
      181 gtgctcgagg aaccggccca tcagttcgaa cacccgaagg atgggctcga tccccgtgcc
      241 gtgggtggct atctggcgcg cggcctgccg aaaggcgtgc tggtgacctg tggcgctggc
      301 catttcttct ccttccccgc catgtacatg gcgttgccgg agggtgcgga aatccagttc
      361 tcctatcagt tcggcgccgt cggccagggc ctgccgctcg ccatcggtac tggcgccggc
      421 aatcccggac ggccccatgt cgcgatcgaa ggcgacggaa gtttgctgtt ccacattcag
      481 gaactcgaca ccgttacgcg gttcaagatg cagatggtgc tgatcgtttg gaacgatggc
      541 ggttatggcg ccgaggtgca caaactgctg ccaaagggct tcgagtgggg acaggcccac
      601 tgggattccc cggatttcgt tgcaatcgcc aaggcgtttg gtggtgacgg cgtaaagttg
      661 gaacgcgagt ccgatctgcc ggctgcggtg acgcaaggtc ttaaacaggg cggcctgtat
      721 ctgatcgatg ttcgggtgtc cccgaccacg accagcgatc cgcacggcaa ggtttattac
      781 ggcatcccaa gcaaggcgcc gctgctgcgt ccggttgcct aaatgccgat gcatttcgaa
      841 ggcgagttcc gggttcccgg caaagctgag gacgtcatca ggcgattctc cgatgtgccg
      901 cggatggctc gctgcatgcc tggcgcggtg ctggagcagc aggcagaaga cgggtcgtgg
      961 ccgggaaaga tggtggtgtc gttcggcccg aagaaaatca atttcaaggg caaggcaacc
     1021 tgcgatttcg atttccaggc gttgaccgga accgtgcatg gccgcggcgc ggcggacatg
     1081 cgatccgcgc gcatcggcgt gaaggtttcg tttgagctgg ccgatgcccc cggcagcccg
     1141 ccggaaacct cggtcaagat cgtttcggac gccgagttgg gcggcgtgct ggaggatttt
     1201 gcgaaaaccg gaggtattgc agtcgccaat gtcatcatgg cggatttcgc tcgccgtgcg
     1261 gcagacgaat ttgccaagga tgcgccaccg ccggaggcag caacagaagt ccaggcgcct
     1321 gccgccccgc tgcaggccaa ttcattgatg tgggtcgtga tcaaggctta ttggcacagg
     1381 ttcctgcagg cgatcggcct ggagcggcaa ccgtcaatat aatcagccta gcgttgcgcc
     1441 ggctcgaccg acgggacccg agcagataac tctgcgatgt catcaacatt atagtgcaaa
     1501 tgcacacgtt gggccgaagc cggacgctgc gtaactgaaa ggcccggccg ccattccgtt
     1561 gccggacgga tcggccgg
//
LOCUS       DATAVD010001522        12589 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3683881, whole genome shotgun sequence.
ACCESSION   DATAVD010001522 DATAVD010000000
VERSION     DATAVD010001522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 12589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12589
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3683881"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..773)
                     /locus_tag="VHX39_29150"
     CDS             complement(<1..773)
                     /locus_tag="VHX39_29150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995261.1"
                     /translation="MNWVWASSLDQFWLSPAFPMWLTLAAAGFFGIIVLVTVLRAEKS
                     VANGALTVITLLAIGIAVASTLRGFVPDGQQSASVETRPPQPVGPALPALSCIDDLAG
                     DLVATGCEKALFGSAESTAAAVSYAASQITRLTGLGDVATANKSMTPELQALRRAVEH
                     DRYGLVAQVLVARDHCTAAECAAFRSLTDSHQIASNMDGHVYDGLVSRYAPLWNAPAA
                     TAPVALLSSMPTGRPTNAEFPSAASTPPVSIMTPEPGTGT"
     gene            complement(954..1184)
                     /locus_tag="VHX39_29155"
     CDS             complement(954..1184)
                     /locus_tag="VHX39_29155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995262.1"
                     /translation="MSIAGAFFLMERALKHKFTVGETVYFTASNVARPAASGTYEVIR
                     LLPTDGDDCQYRIKSSTEAFERVAKESQLDIS"
     gene            complement(1369..1737)
                     /locus_tag="VHX39_29160"
     CDS             complement(1369..1737)
                     /locus_tag="VHX39_29160"
                     /inference="COORDINATES: protein motif:HMM:NF039485.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidB family protein"
                     /protein_id="HEX3995263.1"
                     /translation="MGILDSLENSPAFKGALGQLEGAVLPVVLSEVLGNGSQGGLSAI
                     VAKLQQAGLGDQVKSWIGNGQNLPITAEQLQQVLGSDTVRQLAARFNIPVDQLSQILA
                     QQLPKAVDHASPDGQLPASS"
     gene            complement(1905..2561)
                     /locus_tag="VHX39_29165"
     CDS             complement(1905..2561)
                     /locus_tag="VHX39_29165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020594489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX3995264.1"
                     /translation="MTLKLVIGNKNYSSWSMRPWVALRSGNIAFEEVFISLYTGDADK
                     QRILDFTGSGKVPVLVDGDVTIWDSLAIIEYAAERFPEARLWPEDRASRAHARSISAE
                     MHSGFVALRNECGMNLHRPVGPIELSPAARADIARIQQIWIECRKRYGKSGPFLFGNF
                     GGADAMFAPVVHRFRTYAIDVAPEVRDYMNAMMAQPAFAEWTRAGLAETIVIEKFETT
                     "
     gene            complement(2803..3657)
                     /locus_tag="VHX39_29170"
     CDS             complement(2803..3657)
                     /locus_tag="VHX39_29170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995265.1"
                     /translation="MNPQQIMRTGITASAIAHLSVLTLVLLFSEVHPFGSITAEPIAV
                     DLVSPAEVVQAPEKVEPPPPPKQKAADTFDLAAQPAALNSPPPAAPQPLAAPPQRQAA
                     LSPQQPGLQASVALPQPPATPAAASPATLPATLPATSPAPVIIPAAPDLSIKYHVLLG
                     LPQDNLGDKAGDGIDAEASTKSDIASNLVTEFRRRLRTCSTLPNSIAPSDPVKLKLRV
                     FMTPDGRLAADPVLLEASASAKGPLLMQSAIEALRACQPYAMLPADRYGEWKVLDLGF
                     TPQDFTGG"
     gene            complement(3716..4534)
                     /locus_tag="VHX39_29175"
     CDS             complement(3716..4534)
                     /locus_tag="VHX39_29175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3995266.1"
                     /translation="MQFVEANGANIPAIGLGTWELRGRTCARLVEQAIKLGYRHIDTA
                     QVYDNEREVGDGLRASGVKREDVFVTTKVWTTHFAPNDLERSTKESLARLRLSEVDLL
                     LLHWPNPQVPLSETLGALAHVRQLGMARHIGVSNFTVALIEEAVALCPEALACDQVEY
                     HPYLDQTKVLDACGRHGMALVAYSPVAKGRIKNDQALARIGQAHGKTAAQVCLRWLVQ
                     QNVAAIPRTSRIERLSENIDVFDFVLSDDEMHLISGMGSAKARLTDFGFAPKWD"
     gene            complement(4610..4948)
                     /locus_tag="VHX39_29180"
     CDS             complement(4610..4948)
                     /locus_tag="VHX39_29180"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3995267.1"
                     /translation="MQRLRLKADGRIVELRDGQEFPLAPATIEAVPAVPIGAAAETVS
                     APAVRDLRRRAHLTQLEFAARLGVPVETIRNWEQGKRMPRGPARALLAVIAHAPETVF
                     AALSPGVSSI"
     gene            complement(5026..6447)
                     /gene="mgtE"
                     /locus_tag="VHX39_29185"
     CDS             complement(5026..6447)
                     /gene="mgtE"
                     /locus_tag="VHX39_29185"
                     /inference="COORDINATES: protein motif:HMM:TIGR00400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEX3995268.1"
                     /translation="MAEDLEVAPAADASELDRFPMRNEDGGIRHEFVEKITSAVHSAD
                     TAFLREIVAELHEADLGDLIAALEPDDRVSLVELTGADFDFSALNEVDDSVREEILEE
                     LEPETVAEGVRELESDDAVELLEGLDEKDQEEILEKLPQSERDALERSLLYPENSAGR
                     RMQTEFITVPPDWTVGQAIDYMRDTPDLPDRFYEIYAVDKAKHWQGAVSLDALLRSRR
                     PVPLADLIDEDRRRVSVLDDQEEVARLFGKYNLVAAPVVDTTDRLVGVITIDDVVDVI
                     EEEADEDLKALGGVTSDEELSDNVWTIARGRFNWLLVNLATAFLASSVLGVFEGQLEK
                     MVALAVLAPIVASQGGNAATQTMTVAVRALATRELGPNNAYRVVMREGLVGLVNGLAF
                     AVITGIAAVAWFRIPGLGVVIGLAIVTNLVAGALGGILIPMVLERVRADPAVASGTFV
                     TTITDVVGFFSFLGIATLWFGLG"
     gene            6570..7334
                     /locus_tag="VHX39_29190"
     CDS             6570..7334
                     /locus_tag="VHX39_29190"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX3995269.1"
                     /translation="MNLLKAALVASMVWTMAAHAADCPRKGTLGTSRTLAVDAATTPR
                     VGLKNFPQTLPLRDHEVVLTFDDGPWPPTTPKVLAALAHECVLATFFLIGKPASEHPE
                     LVRRIAAEGHSIGHHTWLHRSLKQIKPEETDEEINHGIEAVEMALHGVATSTPSTPFF
                     RFPGFETTPETLAKLQSRGIMVFGADLWASDWNPMTPQEELKLLTDRLKVARKGIILL
                     HDPKAHTAAMLPAFLRYLRENHYRVVHLVPKAPARF"
     gene            7444..8802
                     /locus_tag="VHX39_29195"
     CDS             7444..8802
                     /locus_tag="VHX39_29195"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX3995270.1"
                     /translation="MIADSWAGVRTPHWAVLCLGLLTCITTQAASAADCPGHPDALGT
                     SRTLVVDPREHTKIGTMQYAETLPLEDHEVVLTFDDGPLPRNSNQILDILASQCIKAT
                     FFEIGQMARAYPEGVRKLRDAGHSIGTHTQDHPLNMNRMPIERAKQEIDDGIASVKAA
                     LGDDTSLAPFFRIPGLMRAEAVEDYLASQGIQTWSADFPADDWRHISSARVYDLAIQR
                     IEAKGKGILLLHDIQARTVAALPRILQELKAKGFRIVHVVPATPDRPATPTDPQQWLL
                     HPPLEAVAISHWPKIPNFVFVNAGALPAPLLTDSDWLEGQFPSPFDRTLRHGPASWPQ
                     ILLALNDTTPALPVPAQSIFEIQENPRATMESLSPSGGRAVQTASAEAENDRLTKPTA
                     AEADEPRNSRRAGHGKHAGRGAGRAQRTAASHAGRRATHLATPAHRGGLKHLVQVKKG
                     NV"
     gene            complement(8807..9181)
                     /locus_tag="VHX39_29200"
     CDS             complement(8807..9181)
                     /locus_tag="VHX39_29200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995271.1"
                     /translation="MKFLGYIYRFASNFLFLAMVYYSLNFMERYQQRAIVAILVLVYA
                     SMRAASAFRLFYFYQRIERLEGEARRLAGLTGEGPAAVASRKHIVGDVADLRRDGEMK
                     SYIDLLFLALVMLLCIAKIVTD"
     gene            complement(9546..10181)
                     /locus_tag="VHX39_29205"
     CDS             complement(9546..10181)
                     /locus_tag="VHX39_29205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995272.1"
                     /translation="MTLFKTIFAFTIIVLSADAALAQRASPPVATPDGVATAASVGAA
                     APPRCDANCVRNNAEPASTVCAPKIAAQSPPDFDWNSRPTQGIFQQADPSSPADAVVR
                     YRGDAVRFSNERKIWIRLSYECAYDVEARIVVSVDVHAGQLDQPPPSTVQPLANAAAT
                     SPPRLSSQALAQAIKQAVTQPAQVQQDPHKRPRVWEPSPVEIEQQASNPQH"
     gene            complement(10256..10690)
                     /gene="csgH"
                     /locus_tag="VHX39_29210"
     CDS             complement(10256..10690)
                     /gene="csgH"
                     /locus_tag="VHX39_29210"
                     /inference="COORDINATES: protein motif:HMM:NF041112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli-like amyloid fiber formation chaperone
                     CsgH"
                     /protein_id="HEX3995273.1"
                     /translation="MLFRAINKISMRSVAAIITLLGALLTLQPSCFARDQDMSVIARA
                     SSGPLACEIRKVSVGESVQLTGVVSSSAAVTGNARFLLTKSGPSGTSNINQGSAFDLA
                     AGAEMHVSHVTINLAREDHALVEFVATSGDGISCHATANLKL"
     gene            complement(10749..12563)
                     /locus_tag="VHX39_29215"
     CDS             complement(10749..12563)
                     /locus_tag="VHX39_29215"
                     /inference="COORDINATES: protein motif:HMM:NF018688.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995274.1"
                     /translation="MKRQFLLASASLIATVLVASAAHADDLVLNNQTNVSQTGTNGTF
                     TVDQTGANNIAGTVTGPTSGAGSALVQSGTENALAVTQSGGNNVFTGAPVTSAGSVVQ
                     SGAGNSADVTQSGNTSKVTLSQSGTNNGVYNEQVGPEASPIDTNVIDQSANKSAVTLT
                     QTGSNNIFSINQGGANNTIGVTQSDVGNEARASQTAPTSNGSISIVQSGNISGRGNYA
                     DIAQTSGSGSSTTLAQTGSSNWSQSSQSGNASTISLVQNGTSNTIFGTQSGTSSSVKV
                     NQDNTGEAYPGFEYSLAHYSQSGNNDTIVLNQTGSNAAYASQLGNSNAISSVQNGDGN
                     NLNNGGQQGNGNTITNTQTGSSHTLEANGVNMQTGNNNTLTNSQNGYYQTAYASQTGN
                     NNILWLSQDNSNFINDWNTISVNQGTSSSAPSTNGTVYLGQTGGYDQFAVNTSGNGNY
                     LSASQSNLSETATLTQTGNNNTLTSYQTGQNETATIAQLGSNNYVYNSQGGNGNQTAT
                     ITQSGNGNQLQNYQSTSDTLLAIQTGNNNYIYNSQYSGNSGMQLASLTQVGNSNSIYG
                     NQAGSNNTATVAQYGNNYAAVYSQTGSGNTVSITQGKH"
BASE COUNT         2396 a         3904 c         3866 g         2423 t
ORIGIN      
        1 gtcccggtcc ccggctcagg cgtcatgatg ctgacgggcg gcgttgaagc tgcgctggga
       61 aattcggcat tggtgggcct gccggtgggc atcgacgaca acagcgcgac cggcgctgtc
      121 gccgcaggcg cgttccataa cggcgcataa cgcgagacca ggccgtcata gacatgcccg
      181 tccatgttgg atgcgatttg atggctatcc gttagcgacc ggaaagcggc gcattccgcc
      241 gccgtgcaat gatcgcgcgc caccaggacc tgcgccacca gcccgtagcg gtcgtgctcg
      301 accgcgcgcc gcagcgcctg caattcgggc gtcatgctct tgttggcggt ggccacatcg
      361 cccagccccg tcaaccgcgt aatctgggac gccgcatagg agaccgctgc agcggtggat
      421 tcggcggaac cgaacaacgc cttttcgcag ccggtcgcaa ccaggtcacc cgccagatcg
      481 tcgatacacg acagagccgg caacgccgga cccactggtt gcggcggtcg ggtctcaacg
      541 gacgcactct gctggccgtc cggaacgaac ccgcgaaggg tggaggcgac cgcgatgccg
      601 atggcgagca gcgtgatgac cgtgagcgcg ccattggcaa ccgatttctc ggcgcgcaaa
      661 accgtgacga gaacgatgat cccgaagaat ccggctgcgg ccaaggtcag ccacatcgga
      721 aacgccggcg aaagccagaa ttgatccagc gatgaagccc aaacccagtt catgcgtggt
      781 gtccctcaac gcagcataga gcgcatctag caaaaaagat gactactgat ttcacgcacg
      841 cgtccattgc ggaatgcttc tgcgatcggg gccttttgac ggcgggcaaa gcgggaaccc
      901 gcttctccac agccgctttt agccctgcgt gcaactcctc gggaccagcg gattcaggaa
      961 atgtcgagct gactttcctt ggccacccgt tcgaaagcct cggtcgaact cttgatccgg
     1021 tactggcagt catcgccatc ggtcggcagc aatcggatca cctcataggt gccgctggcg
     1081 gccggacggg cgacattgct ggcagtaaaa tagacggtct ctccaacagt gaatttgtgc
     1141 ttcaacgccc tctccatcag gaaaaaagcg ccggcgatgc tcacggtccc gctgcaatag
     1201 ccggctgaaa accccgccac aatctagcac agcgcgggga tttttggcca gttacatccg
     1261 ggcatggcaa atccacggat tttgcaggct tttcagcgag ataaacgctg ttttggcgat
     1321 tccggacaaa tcttaaaaat gcggtccgga accagccttt ccgggaggtt atgacgacgc
     1381 cggaagctgg ccgtccgggc tcgcatggtc cacggccttg ggcagttgct gcgccagaat
     1441 ctgggacagt tgatcgaccg gaatgttgaa ccgcgccgcc agttgcctga cggtgtcgct
     1501 gcccagcacc tgctgcaatt gctcggccgt gatcggcagg ttctgaccat taccgatcca
     1561 ggatttaacc tgatcgccga ggccggcctg ctgcagcttg gcaacgatcg cggagagccc
     1621 gccctggctg ccattgccga gcacttcgct cagcacgacc ggaagcaccg ctccctcgag
     1681 ctggccgagc gcccccttga acgccggtga attttccaat gaatcgagaa ttcccatggt
     1741 caagcccttt cgctcaatgc gccaagttag ttgacaaagt cgattgtcaa atcggttgcg
     1801 cctagacctg cgccaagaca gctgcgccaa gtcggttccc gattcagacc ggtttcgcag
     1861 gcctccgtca aggcgtgatg acagccggct ctcacaaatc gggatcaagt tgtctcgaac
     1921 ttctcgatca cgatggtttc ggcgaggccg gcccgggtcc attccgcgaa cgccggctgc
     1981 gccatcatcg cgttcatgta gtcgcgcacc tcgggcgcca cgtcgatcgc ataggtgcga
     2041 aaccgatgca ccaccggcgc aaacatcgcg tccgcgccgc cgaagttccc gaacaggaac
     2101 ggtccggact ttccatagcg cttgcggcat tcgatccaga tctgctgaat ccgcgcgata
     2161 tcggcgcgcg cggctggcga cagctcgatc ggcccgaccg gccgatgcag gttcatgccg
     2221 cattcgtttc gcagcgcgac gaagcccgaa tgcatctcgg ctgagatcga acgcgcatgg
     2281 gcgcggctgg cgcggtcctc cggccacagc cgggcttccg gaaagcgttc ggcggcgtat
     2341 tcgatgatgg ccagcgaatc ccagatcgtg acgtcgccat ccaccagcac cggcaccttg
     2401 cccgaaccgg tgaaatcgag aatccgctgc ttgtcggcgt cgccggtata gagcgagatg
     2461 aaaacttcct cgaaggcgat gttgccgctc cggagcgcca cccagggccg catcgaccat
     2521 gaggaatagt ttttgttgcc gatgacaagc ttcaaggtca tgcgaaaaaa tcctcttccg
     2581 tgggtcacta tgtcataccg cgcggtgcgc gttcaactcg ccggtacgcc ctcgccgcgg
     2641 ttgccgcaat ggcgcacgcg cggcgggatc gcgaccgccg ggggatgcga tatgagtggt
     2701 tatttggtcg atattctagc ggtcggtttc ttctgcaccg gcagtttgcc ccggatgcct
     2761 ggaatacgat gggcagctag cgaaatcact cggatcccaa tcctatccgc ctgtgaaatc
     2821 ctgcggcgta aagccgagat cgagcacttt ccattcgccg tatcggtctg ccggcaacat
     2881 cgcatagggc tgacaggccc gcagcgcctc gatcgcgctt tgcatcagca acgggccctt
     2941 ggcggacgcg ctggcctcga gcagcactgg atccgcggcc aacctgccat ccggcgtcat
     3001 gaacacgcgc agcttgagct tgaccggatc ggaaggcgcg attgagttcg gcagcgtcga
     3061 gcatgtccgc agacgacgac gaaactccgt gaccagattg gacgcgatat cggacttggt
     3121 tgacgcttcc gcatcgatac cgtcgccggc tttgtcgccg agattgtcct gcggcagacc
     3181 gagcagtaca tggtatttaa tcgaaagatc gggcgctgcg ggaatgatga cgggcgccgg
     3241 cgaggtcgcg ggcagcgtgg caggtaaagt cgcgggcgac gccgcggcgg gcgttgccgg
     3301 tggctgcggc agggcgacgg acgcttgcaa gccaggttgc tgcggcgaca gcgccgcctg
     3361 cctttgcggt ggcgctgcaa gtggctgtgg cgcggcgggc ggcggcgaat tcaacgctgc
     3421 cggttgcgcc gcaaggtcga aggtatcagc agccttttgt ttcggtggcg gcggcggttc
     3481 gactttctca ggagcctgca ccacctcggc cggcgaaacc agatcgaccg cgatcggctc
     3541 ggcggtgatc gaaccgaacg gatgcacctc gctaaataac agcaccaacg tcagcaccga
     3601 caaatgggca atcgccgatg ccgtgatacc cgtgcgcatg atctgttgtg ggttcatcgt
     3661 actcgagcgt gtcgatgccg cctccgatcc cagcatagcg gcctatgccg cagtctcaat
     3721 cccatttcgg cgcgaaaccg aaatcggtga gccgtgcctt tgcgctgccc atcccggaaa
     3781 tcaggtgcat ctcgtcgtcg gacaatacga agtcgaagac gtcgatgttt tccgacagcc
     3841 gctcgatccg cgacgtccgc ggtatcgcgg caacgttctg ctgcaccagc cagcgcagac
     3901 agacctgggc tgcggtcttg ccgtgggctt gcccgatccg cgccaacgcc tggtcgttct
     3961 tgatgcggcc cttcgccacc ggactgtagg cgaccagcgc catgccgtgg cggccgcagg
     4021 cgtccagcac cttggtctgg tcgagatacg gatggtattc gacctgatcg cacgccagcg
     4081 cttccgggca cagcgcgacc gcctcttcga tcagagccac ggtgaagttc gagacgccga
     4141 tgtgccgggc catgccgagc tgccggacgt gggccagcgc gcccagcgtc tcggacaacg
     4201 gcacctgcgg attgggccag tgcaacagca gcagatcgac ctcggacagg cgtaacctgg
     4261 cgagactttc cttggtggat cgctcgagat cgttgggcgc gaaatgcgtg gtccagacct
     4321 tggtggtcac gaacacgtcc tcgcgtttga cgccggaggc gcgcaggcca tcaccgactt
     4381 cgcgttcgtt gtcgtagacc tgcgcggtgt cgatgtggcg atagccgagc tttatcgcct
     4441 gctcgaccag acgcgcgcag gttcgtccgc gcaactccca ggtgcccagc ccgatcgcgg
     4501 gaatgttggc gccgttggcc tcgacgaatt gcatcgcgga tacccagaca aaccggacgc
     4561 cattatgtcg cgtcgggacc gtgctgccaa catcgcttcg ccggcgaact cagatcgacg
     4621 agacaccggg agagagggct gcaaacacgg tctctggggc atgggcgatg acagccagaa
     4681 gcgcccgtgc cggtccgcgc ggcatgcgct tgccctgttc ccagtttcgg atggtctcga
     4741 cgggaacgcc gagccgggcc gcgaattcga gctgcgtcag gtgggcgcgg cggcgcagat
     4801 cgcgcaccgc cggagctgat accgtctccg cggctgcacc gatgggaacc gccggcacag
     4861 cttcgatggt cgccggcgcg agcgggaact cctgcccgtc ccgcaactcg acaatccggc
     4921 cgtctgcttt caatcgcaag cgctgcatgc ccgactccat atccagatgg tcggcgatgc
     4981 gcgttaagtt ccgattaacg ataccagacc cggcaacctg ccgagctaac ccaacccgaa
     5041 ccacagcgtg gcgatgccga gaaacgaaaa gaacccgacc acgtcggtga tggtggtgac
     5101 gaaggtgcct gatgccaccg ccggatcggc ccgcacccgc tccagcacca tcggaatcag
     5161 aatgccgcca agcgcgccgg ccaccagatt ggtgacaatc gcgagcccaa tcacgacgcc
     5221 aagcccgggg atccgaaacc aggccaccgc ggcaatgccg gtgatgaccg caaaggcaag
     5281 accgttgacg aggccgacca atccctcacg catgaccacg cgatatgcat tgttcggacc
     5341 gagttcgcgg gtggccaagg cgcgcaccgc gaccgtcatg gtctgggtcg cggcattgcc
     5401 gccctggctc gccacgatcg gcgccagcac cgccagcgcc accatttttt ccaattggcc
     5461 ttcgaacacg ccgagcaccg aggacgccag aaaggcggtg gccagattga ccaacagcca
     5521 gttgaagcgg cccctggcga tggtccagac attgtcggac agctcctcgt cgctggtgac
     5581 gccgccgagt gccttgaggt cctcgtcggc ctcctcctcg atcacgtcga ccacgtcgtc
     5641 gatggtgatg accccgacca gccggtcggt ggtgtcgacc acgggggcgg cgaccagatt
     5701 gtacttgccg aacaaccgcg ccacctcctc ctggtcgtcc agcaccgaga cccggcggcg
     5761 gtcttcgtcg atcagatcgg ccagcggcac cggccggcgc gaccgcaaca gcgcatccag
     5821 cgacaccgcg ccctgccagt gcttggcctt gtcgaccgcg tagatttcat aaaaccggtc
     5881 cggcaagtcc ggcgtgtcgc gcatgtagtc gatcgcctgc cccacggtcc aatccggcgg
     5941 caccgtgatg aactcggtct gcatccggcg gccggcggag ttttccggat acagcaggct
     6001 gcgctccagc gcatcgcgct cggattgcgg cagcttttcg aggatttctt cctggtcctt
     6061 ttcgtcgagg ccttcgagca attcgacggc gtcgtcggat tccagctcgc gaacgccctc
     6121 cgccaccgtc tccggttcga gttcctcgag gatctcctcg cggacggagt cgtcgacttc
     6181 gttgagcgcc gagaagtcga aatccgcgcc ggtcagctcg accaggctga cacggtcgtc
     6241 gggttcgagc gctgcgatca gatcgccgag gtcggcctcg tgcagttccg cgacaatctc
     6301 gcgcaagaag gccgtatcgg cggaatgaac cgcgctggtg atcttctcga caaattcgtg
     6361 ccgaatcccg ccatcttcgt tccgcattgg gaagcgatct agctccgacg catcggcggc
     6421 tggggcaacc tccagatcct cggccatgcc gcgcctcgcc ggtttgacag aactgctgaa
     6481 ctcgtctgag ttatcgcttc acgcattagc caattggcaa caccaagcgc aatgacaaat
     6541 atccgcggac cacaacgagc tcggaattga tgaacctgtt aaaggccgcc cttgtcgctt
     6601 cgatggtgtg gacgatggcg gcgcacgcgg cggactgtcc gcgcaaggga acgctcggca
     6661 cctcgcgcac gcttgccgtc gatgccgcca ccaccccgcg ggtcgggttg aaaaacttcc
     6721 cgcaaacgct gccgcttaga gatcacgagg tggtgctgac cttcgatgac ggcccatggc
     6781 cgccgaccac gccgaaggtg ctggcggcgc tggcccatga atgcgtgctc gcgacctttt
     6841 tcctgatcgg caagcccgcc tcggaacacc cggaactggt gcgcaggatc gccgccgagg
     6901 gccacagcat cggacatcac acctggctgc accgcagcct gaagcagatc aaaccggaag
     6961 agaccgacga ggaaatcaat cacggcatcg aagcggtcga aatggcgctg cacggggtgg
     7021 cgacctcaac cccaagcacg ccgttttttc gtttcccggg cttcgagacc acgccggaga
     7081 cgctggccaa gctgcaatcg cgcggcatca tggtattcgg cgccgacctc tgggccagcg
     7141 actggaatcc gatgacaccg caggaggagt tgaagctgct gaccgaccgg ctcaaggtcg
     7201 cccgcaaggg gatcatcctg ctgcacgacc ccaaagccca caccgccgcc atgctgccgg
     7261 catttttgcg ctatctcagg gagaatcact atcgcgtggt tcacctggtt cccaaagcgc
     7321 ccgctcgatt ttgacggcgt tctgtgaacc ggaaacggtg cccggaagtc caacaattaa
     7381 ggccgtgttc atcgcgctct atgtaagtat cggccgtaca aacgggaatt catcacggtg
     7441 ttcatgatcg ctgacagttg ggctggtgtt cggacaccgc attgggctgt cctctgcctc
     7501 ggtcttttga cctgcatcac cacccaggct gcgtcggcgg ccgattgccc cggtcatccc
     7561 gatgcgctcg gcacctcgcg cacgctggtg gtggatccga gggagcatac caagatcggc
     7621 accatgcaat atgccgagac cctgccgctg gaagatcacg aggtggtgct gaccttcgat
     7681 gacgggccgc tgccgcgcaa cagcaatcag attctggata ttctcgcctc gcaatgcatc
     7741 aaggcgacct tctttgaaat cggccagatg gcccgggcct atccggaagg cgtccgcaag
     7801 ctgcgcgacg ccggccacag catcgggacc cacacccagg atcatccact gaacatgaac
     7861 cggatgccga tcgaacgcgc caagcaggag atcgatgacg gtatcgcttc ggtgaaggcc
     7921 gcgctcggcg atgatacctc gctggccccg ttttttcgga ttcccggcct gatgcgcgcc
     7981 gaagcggtcg aggactatct ggcctcgcag ggcatccaga cctggagcgc cgatttcccg
     8041 gccgacgact ggcggcatat ttcgtcggcg cgggtgtacg atctcgccat ccagcgaatc
     8101 gaggccaagg gaaaaggcat cctgctgctg cacgacatcc aggcccgcac ggtcgccgcg
     8161 ctgccccgga tcctgcagga gttgaaggcg aagggctttc gtatcgtcca tgtggtgccg
     8221 gcgacgccgg atcggccggc gacgccgacc gatccgcagc aatggctgtt gcatccgccg
     8281 ctggaagccg tggcgatctc acactggccc aaaattccca atttcgtttt tgtcaatgcc
     8341 ggcgcgcttc ccgcgccatt gttgacggat tcggattggc ttgaaggaca gtttccaagc
     8401 ccgttcgatc gcaccctgcg ccacgggccg gcgtcctggc ctcagatatt gctggcgctg
     8461 aacgacacga cacccgcatt accggtgccg gcacagagca tatttgaaat tcaggaaaat
     8521 ccgcgcgcga ccatggaatc gttgtcgcct tcaggggggc gtgccgtcca gacggcctcg
     8581 gccgaggccg aaaacgaccg cctcacaaag ccgacggcgg ccgaggccga cgaaccccgc
     8641 aattcccggc gcgccggcca cggcaagcat gccggacgcg gtgcggggcg tgcccagcga
     8701 accgcggcgt ctcacgccgg ccgccgcgca acccatctgg ccacgcccgc ccatcgcggc
     8761 gggttgaagc acctggtcca ggtcaagaag ggaaacgtgt aacggctcaa tccgtcacga
     8821 tcttggcaat gcacagcagc atgaccaagg cgagaaacaa cagatcgata taagacttca
     8881 tctcgccgtc acggcgaaga tccgctacgt cgccgacgat gtgcttgcgg gaggcgacag
     8941 cggcggggcc ctccccggtc aggcccgcta gacggcgcgc ttcaccctcc aggcgttcga
     9001 tccgctggta gaaataaaac aagcgaaacg ccgatgccgc gcgcatcgat gcatagacca
     9061 gcaccagaat cgcgacgatc gcgcgctgct gatacctctc catgaagttg agactgtaat
     9121 agaccatcgc caaaaagagg aagttggagg cgaaccgata gatgtagccc agaaatttca
     9181 tgcctgttcc ctgatcgcag ccagtcagtc cggatcgaat cgattcgaaa gattccgcgc
     9241 agcgggtggg tgtcgcgggc ctcagccttg atccccgccg atgtacgcta aagttgttac
     9301 tgcaaggcgg tgagcgcctc gttccggtcc gactgccggt ttcggcctgc cgttggcccg
     9361 gcagcgcttt tggccctcat cacgccgatt tagtgacgtt cgatcgcaaa ttaatcaagg
     9421 gcgccgaggc cgcagggtgg gacaaagcgc gagagccgta gcgaacccag cgcccgagac
     9481 ggctagtcct ctcttaagca gcctttcaat gggtcacgcc tgcgcactgg tccgcacaat
     9541 ctcagctaat gttgaggatt ggacgcctgt tgctcgatct ccaccgggct cggttcccag
     9601 acccgcggtc tcttatgtgg gtcctgttga acctgcgcag gctgcgtcac ggcctgtttg
     9661 atcgcctgcg ccagtgcctg tgatgacaaa cgcggcgggc tcgttgccgc cgcgttcgcg
     9721 agaggttgca ccgtcgaagg aggtggctgg tcaagttgac ccgcatggac gtccacggaa
     9781 accacgattc gcgcttcgac atcgtaggca cattcgtagc tcaggcggat ccatatcttc
     9841 cgttcattgc tgaaacgaac tgcatcgccg cgatagcgaa cgacggcgtc ggcaggagac
     9901 gatggatcgg cctgctggaa gatcccttgt gtcggacgtg aattccaatc gaagtcaggc
     9961 ggcgattgcg ccgcaatctt tggcgcgcag acagtactcg ccggctcggc attgttacga
    10021 acacaattgg cgtcacatcg cggcggtgca gccgcgccca ccgatgccgc cgtcgccaca
    10081 ccatccggcg tcgcaaccgg tggcgaggca cgctgagcga gagcagcgtc cgcgctgagc
    10141 acaatgatgg tgaacgcgaa gatcgtcttg aagagtgtca tggtacgcta cgcttgattc
    10201 atccgtccgg cagccgaaat gtgcaaacta ctcactcgca tattttccgg caggatcaaa
    10261 gtttgagatt ggccgtggca tgacacgaga tgccatcgcc cgaggtggca acaaattcca
    10321 ccaaggcatg gtcctcgcgc gcaagattga tcgtcacgtg actgacatgc atctccgccc
    10381 cggcggcaag atcgaacgcg ctgccctggt taatatttga agttccggat ggtcctgatt
    10441 ttgtcaggag gaagcgagca tttccggtca cagcggccga actggagacg acgccagtca
    10501 attgcaccga ctctccaacg ctgactttgc gaatttcaca tgcgagcggt cctgaggacg
    10561 cgcgggcgat cacgctcata tcctgatccc tggcgaaaca actgggctgt aacgtcaaaa
    10621 gcgcgcccag caaagtgata atcgctgcta cggatcgcat cgaaattttg ttgatcgcgc
    10681 gaaacaacat cggaccgcct tgcaaggagg aaggggcgcg tgcgcccctt ccgacgtgga
    10741 tcgtcagatc agtgcttgcc ttgggtgatg ctgacggtat tgcccgaacc ggtctggcta
    10801 tagacggcag cgtagttgtt gccgtactgg gcaacagtcg cagtgttatt gctaccggcc
    10861 tggttaccgt agatggagtt gctgttaccg acctgcgtca ggctcgcaag ttgcatgccg
    10921 gaattgccgc tgtactggct gttgtagata tagttgttat taccggtctg aatcgccagc
    10981 agcgtgtcgc tggtcgactg gtagttctgc aactgattgc cattgccgct ctgagtgatc
    11041 gtcgcggtct ggttaccatt gccgccctgg ctgttgtaga catagttgtt ggagccgagc
    11101 tgcgcgatgg ttgcagtctc gttctggccg gtctggtagc tggtcagggt gttattgtta
    11161 ccagtctgcg tgagcgtcgc agtctcggac aggttcgact gggacgcgct caggtaattg
    11221 ccgttgccgg aggtgttgac cgcgaactga tcatatccgc cggtctgacc gaggtagacc
    11281 gtgccgttag tggacggcgc cgaactggac gtgccctgat tgaccgaaat ggtgttccag
    11341 tcgttaatga agttgctgtt gtcctgagac agccacagaa tgttgttgtt accggtctgc
    11401 gaagcgtagg cagtctgata ataaccgttc tggctgttgg tcagcgtgtt gttgttaccg
    11461 gtctgcatat tgacgccgtt ggcctccagc gtgtgagacg aaccggtctg cgtgttggtg
    11521 atggtgttgc cgttgccctg ctgtccaccg ttgttcaggt tgttgccgtc gccgttctga
    11581 accgaggaga tggcgttgct gttaccgagc tgcgaggcgt aagcggcatt gcttcccgtc
    11641 tggttgagga cgatcgtatc gttgttgccg ctctgcgagt aatgagcaag gctgtattcg
    11701 aaaccgggat aagcttcacc ggtgttgtcc tggttcacct tcacgctgct ggaagtgcca
    11761 gactgggtac caaaaatagt gttcgacgta ccgttctgaa ccagcgagat cgtgctcgca
    11821 ttgcccgact gcgaagactg cgaccagttg gaagaaccgg tctgcgcaag cgttgtgctc
    11881 gagccagatc ctgaggtttg ggcaatgtcc gcgtagttgc cgcggcctga gatgttgccg
    11941 ctctggacga tcgagatgct gccgttggac gtgggcgctg tctgcgaagc gcgtgcttcg
    12001 ttgccgacat cgctctgcgt aaccccgatc gtgttgttgg cgccgccttg gttgatgctg
    12061 aaaatgttat tgctgccggt ctgcgtcagc gtcaccgcgc tcttgttcgc gctttgatcg
    12121 atgacgttgg tatcgatcgg agaggcttcc ggcccgactt gctcgttgta gacgccattg
    12181 ttggtgccgc tctgggagag tgtcaccttg ctggtgttgc ccgactgcgt cacgtcggcg
    12241 gagttgcccg cgccggactg aacgactgaa ccggccgagg tcacgggtgc gccggtgaaa
    12301 acattgttgc cgccggactg agtgacggcc agtgcgtttt cggtcccgct ttgaaccagt
    12361 gcagaacccg cccctgacgt gggacctgtg accgttccgg caatgttgtt ggcgccggtc
    12421 tgatcgacgg taaaggtacc attggtgccg gtctggctga cgttcgtctg attgttgaga
    12481 acgaggtcgt cagcgtgtgc cgccgaagcc accagcacgg tggcaataag gctcgcggac
    12541 gcgagcagaa attgtctttt cataggaaca ctccgttaac tggggggag
//
LOCUS       DATAVD010001523         2065 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3683954, whole genome shotgun sequence.
ACCESSION   DATAVD010001523 DATAVD010000000
VERSION     DATAVD010001523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3683954"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1184)
                     /locus_tag="VHX39_29220"
     CDS             complement(<1..1184)
                     /locus_tag="VHX39_29220"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: protein motif:HMM:NF002223.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEX3995275.1"
                     /translation="MSQRKSAVILGAQWGDEGKGKIVDVLSEKFQVVARYAGGHNAGH
                     TVIIAGRKFVLQLIPCGVLRPECKGVIGNGVVLDPMAFLSEVKKLKDAGLPIDGQLFV
                     SNRAQVILPYHRMIELAAENAPGRTKIGTTSRGIGPAYEDKMHRSGLRVVDLLNPALL
                     RTHINNACYEKNTIAQALFGTEPLDPKAIYEEYARAAEQVAPFVTDTAVLLNEAIRAG
                     QKVMFEGAQGALLDIDHGTYPFVTSSSSTSGGAVTGTGVGPTSIGTVIGVTKAYVTRV
                     GEGPFPTEIHDDSATLLRARGQEYGAVTGRPRRCGWLDLPLLRYSNMINGTEWLVVTK
                     MDVLDECAEIPVCTGYRINGKLTDTIPADMRGFEAIHPVYTTLKGWNASTEGITEFDK
                     LP"
     gene            1286..1603
                     /locus_tag="VHX39_29225"
     CDS             1286..1603
                     /locus_tag="VHX39_29225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995276.1"
                     /translation="MAAAFKEVRKLQGERVRMRFDDGREVVATLLCATKDIDGSRHLI
                     YDKVEAGPAGATGCLYADAKALVKIEPADAKNHPAGPKGRDHVSMRSQFEQEWTKALR
                     PSA"
     gene            complement(1607..>2065)
                     /locus_tag="VHX39_29230"
     CDS             complement(1607..>2065)
                     /locus_tag="VHX39_29230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995277.1"
                     /translation="VLDMPGRKTLAVIPVSRNTQRISISRDQSMVFTADQTKPQMAVI
                     DTATNAVKAWIPLPAVGYGSASTLDGKWLLVQMGPLKQVAVIDLGAMKVARTIDVPAG
                     SGEILMRPDGKAAYVSCPIDGKVAEINLATWQVTRLIDAGAKADGMAWVK"
BASE COUNT          360 a          603 c          682 g          420 t
ORIGIN      
        1 ctgggtagct tgtcgaactc ggtgatgccc tcggtggagg cgttccagcc tttcagcgtc
       61 gtgtagaccg ggtggattgc ctcgaatccg cgcatatccg ctgggatggt gtcggtgagc
      121 ttgccgttaa ttctgtagcc agtgcagacg ggaatctccg cgcactcgtc gaggacatcc
      181 atcttggtca cgaccagcca ttcggtgccg ttgatcatgt tggagtagcg cagcagggga
      241 agatcgagcc atccgcagcg tcgcggccgg ccggtgaccg cgccatactc ctgtccgcgt
      301 gcccgcagca gcgtggccga atcgtcgtgg atctcggttg gaaaggggcc ttcgcccacg
      361 cgggtcacgt aggccttggt tacgccgatg accgtaccga tcgacgttgg gccgacgcct
      421 gtcccggtaa ctgcgccgcc cgatgttgac gatgacgatg tgacgaaggg gtaggttccg
      481 tgatcgatgt cgagcagggc gccctgcgcg ccctcgaaca tcaccttctg gcccgcgcgg
      541 attgcttcgt tcagcaggac tgcggtgtcg gtcacaaagg gggcaacctg ttcggccgcc
      601 cgcgcatatt cctcgtaaat ggccttgggg tccagtggtt cggtgccgaa gagcgcctgg
      661 gcgatggtgt tcttctcgta gcaggcgttg ttaatgtgcg tccgcagaag ggccgggttc
      721 agcaggtcga cgacgcggag cccgctgcga tgcattttgt cttcgtaggc cggcccgatg
      781 ccacggctgg tggtcccgat tttggtccgt ccgggggcgt tctcggccgc gagttcgatc
      841 atgcgatggt agggcagaat gacctgggcg cgattggaga caaaaagctg tccgtcgatg
      901 ggcaagccgg cgtctttgag cttcttcacc tcgctgagga aggccatggg gtcgagcacg
      961 acgccgttgc cgatgacgcc tttgcactcc ggccgcagga ctccgcaggg aatcaactgc
     1021 aggacaaact ttctgcctgc gatgatgacg gtgtgcccgg cgttgtgtcc gcccgcatag
     1081 cgcgcgacca cctggaattt ctcgctgagc acgtcgacga tcttgccttt gccctcatcg
     1141 ccccactggg cgccgaggat cactgctgat ttacgttgac tcaaaaggat ttgctccgga
     1201 ctgggtaggt ccgcacgcaa gctttaacac tgggcgccca taactcattc tatactgctt
     1261 ccacgatcga cacggagggg gaatgatggc ggcagcgttc aaagaagttc ggaagctgca
     1321 gggggaacgg gtgcgcatgc ggtttgacga tggccgcgag gtggtggcca cgctgctgtg
     1381 tgcgacgaaa gacatcgacg ggtccaggca cctgatctac gacaaggttg aggcggggcc
     1441 ggcgggcgcg accggatgct tgtatgccga cgcgaaggcg ctggtgaaga tcgagcctgc
     1501 ggacgcgaag aaccaccctg cgggccccaa aggccgggac cacgtttcga tgcggagcca
     1561 attcgagcag gagtggacga aggcgttgcg cccgagcgcg taaggcttac ttcacccagg
     1621 ccattccatc ggccttggcg cctgcgtcga tcagcctggt gacctgccag gtggccaaat
     1681 tgatctccgc aactttgccg tcgatcgggc atgagacgta ggctgccttg ccgtccgggc
     1741 gcatgaggat ctctcccgag ccggcgggaa catcaatggt ccgcgcgacc ttcatggcgc
     1801 cgaggtcaat caccgcaact tgcttcagcg gtcccatctg gaccagcagc cacttgccgt
     1861 cgagcgttga agccgatcca tacccgacgg cgggcagggg aatccatgcc ttaactgcgt
     1921 tggttgccgt gtcgatgacg gccatctgtg gcttggtctg gtccgcggtg aagaccatgc
     1981 tctgatcgcg ggagatggaa atgcgctgcg tatttctcga caccggaatt acggctagtg
     2041 tcttccgccc gggcatgtcc aagac
//
LOCUS       DATAVD010001524         5572 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3306254, whole genome shotgun sequence.
ACCESSION   DATAVD010001524 DATAVD010000000
VERSION     DATAVD010001524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5572
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3306254"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(27..737)
                     /locus_tag="VHX39_29235"
     CDS             complement(27..737)
                     /locus_tag="VHX39_29235"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX3995278.1"
                     /translation="MIVADAMTRQVLAIDPDAPLVQAVRLMTEHKVSGLPVVDRDGRV
                     AGMLTEGDLIRRAETGTDGQKAGWFTNFFLSGWVAENYVLTHGRRVGEVMSNGAFTVT
                     ENMDLAEAVELMRHHRVKRLPVLRDGRLCGIVSRADLVRELGKALSVAPVNADDAAIA
                     TALRAAIDREGWADDKMVTIAVNGGVIDLDGCLFDTRKREALGVLAENIPGVTKVANR
                     IICIEQNSGMVTYDPSDL"
     gene            complement(767..1519)
                     /locus_tag="VHX39_29240"
     CDS             complement(767..1519)
                     /locus_tag="VHX39_29240"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3995279.1"
                     /translation="MLALLSDASTGSAAVSFGGAKLPLKASFPQPACACVNTVPTPGH
                     ILDALAPMAKKLQFGRGDEIIAQGDPAEYCIQVVSGCVRTVQLLEDGRRQVGAFLLPG
                     DVFGWEALGEHAFAAEAVTPVTLRRFRLAAIDERADNDRTFAQKLRRHIAEQIRITRG
                     HLTLLGRLTASERIAAFLLEMSDRLRGPGKSTIELPMCRADMADYLCLTIETVSRGLT
                     ELRQSGAIGVERSHIAIHDRRALSLTGFGRLH"
     gene            1610..2248
                     /locus_tag="VHX39_29245"
     CDS             1610..2248
                     /locus_tag="VHX39_29245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3995280.1"
                     /translation="MDHLTPPRTTAIIHVVDDDDAVRDSLRFLLEPEGWTVRTYGNAM
                     ALLDTELGSAGCVLTDFHMPEIDGLELQARLAARGTLLPVIVITGHGDVSAAVRAMRA
                     GAVDFLEKPFSEEDLMNAIRRALEANRCALAASAGVTQAARRIAGLTPREREVLDLLV
                     TGKSNKEMALVLGTSPRTIDVHRARVFQKLDADSIPDLVHLVLAARQGQSPS"
     gene            2245..3783
                     /locus_tag="VHX39_29250"
     CDS             2245..3783
                     /locus_tag="VHX39_29250"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEX3995281.1"
                     /translation="MTDPFEPLAPRRDEGHALLAAITASSNDAIVAKDLVGTVTYWND
                     AATRLFGYTPDEIIGRSITLVIPPERIGEEQSILERVGRGERLTHFETRRVTKDGRAI
                     AVSLTISPIHDTDGTIIGVSKIARDLSEMQRLNGALQQREALLSSVLDTVPDGLIVID
                     ERGIVQSFSPAAARMFGFSPAEVVGRNVKILTPSSHTDAHDSYIERYLATGERRIIGI
                     GRVVVGRRKDGTTFPMELQIGEAFVDGTRRFTGFVRDLTEREDRDRRLAELQSELIHV
                     GRLSELGQMVSALAHEVNQPLTAMGNYLIGIRRLLPNDTPPVVRQAIDKVMEQSERAR
                     GIVQSLRGLVKKESRPREVVNLESMILETSALVMVGAMRAVHLDLRIADDAAYAFLDK
                     VQIQQVLLNLMRNAVEAMAASDIRTLTVATTRLGERVAIRVADTGPGLSETVKSRLFQ
                     PFVTTKSEGLGVGLSICRTIVETHGGELTADSEPGRGAAFHFTVPATPAQGDGEAASG
                     VTPY"
     gene            3934..4281
                     /locus_tag="VHX39_29255"
     CDS             3934..4281
                     /locus_tag="VHX39_29255"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3995282.1"
                     /translation="MDDDAAVLESFQFMLELAGFQVAAYSSAIAFLDSGRIRPCCLIL
                     DQHMPLMTGLELTARLRASAIDVPVLLVTGAPSPAIVARAAELGVEKVLEKPPTEGDL
                     LSFVSMHTSGSAA"
     gene            complement(4427..5251)
                     /locus_tag="VHX39_29260"
     CDS             complement(4427..5251)
                     /locus_tag="VHX39_29260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX3995283.1"
                     /translation="MTTFMVHLELGRPNTKLLRIAADLASRFNADVVGIAACQPLRIL
                     YGDSYISGDVIEQDRDEIAKEANDAEDEFRAVLRGRGRNLEWRSTVTFAPLADYLADQ
                     ARCADLVITGVDHSGSIFDSSRHVDIGDLVMQLGRPALIVPTNAEKLSFKRMLIGWKD
                     SRESRRAVLDALPLLKQADHVAICEIVPGEETVAAQARLADVVGWLRRDGIAAEPVVA
                     LAMENDAAQLDAIANDQAADVIIAGAYGHSRLREWALGGVTKELLLRAGRCSFVSH"
BASE COUNT         1009 a         1836 c         1727 g         1000 t
ORIGIN      
        1 agccgtcctc gggacgcaac ggagagtcac aagtcgctgg ggtcgtaggt caccatccct
       61 gaattctgct cgatgcagat gattcggttt gccaccttcg tcacgcctgg aatgttttct
      121 gcaagaaccc ccagagcctc acgcttgcgc gtgtcgaaca ggcatccgtc caagtcgatc
      181 acgccgccat tgacggcgat agtgaccatc ttgtcgtcgg cccaaccctc ccggtcgatc
      241 gccgcccgca gcgcggtcgc gatggccgca tcgtcggcgt tgaccggtgc cacggacaat
      301 gccttgccga gttcccgcac cagatcggcg cggctgacga taccgcacag acggccgtcg
      361 cgcagcaccg gcaggcgctt cacgcgatga tgccgcatca gttccacggc ctcggccaga
      421 tccatgttct cggtcacagt gaaggcgccg ttgctcatca cctcgccgac ccggcggcca
      481 tgtgtcagca cgtagttttc cgccacccag ccggagagga agaaattcgt gaaccagcca
      541 gctttctggc catcggtgcc ggtctcggcc cggcggatca ggtcgccttc agtcagcatg
      601 ccggccaccc ggccatcgcg atcgaccaca ggcaggccgc tcaccttatg ctctgtcatc
      661 agccgcaccg cctgcaccag cggcgcgtcc gggtcgatgg cgaggacctg cctcgtcatg
      721 gcgtcggcaa cgatcatgct catctcctgt tgaaagcccg tttgcttcag tgcagccggc
      781 caaagccggt cagggacagg gcgcggcggt catggatggc gatatgactg cgctccaccc
      841 cgatggcacc gctctggcgc agctcggtca gcccgcgtga gaccgtttcg attgtcaggc
      901 agaggtaatc ggccatgtcg gcacggcaca tcggcagttc gatggtgctc ttccccggcc
      961 cgcgcagccg gtcgctcatc tccagcagga aggcggcgat gcgttcggac gcggtcagcc
     1021 gccccagcag cgtcaggtgg ccccgcgtga tgcggatctg ttcggcgatg tggcggcgca
     1081 acttctgggc gaaggttcgg tcgttatcgg cccgctcatc aattgcagcg aggcggaagc
     1141 ggcgcagcgt aaccggggtg accgcctcgg cggcgaacgc gtgctcgccc aatgcctccc
     1201 agccgaagac atcgccgggc agcaggaacg cccccacctg gcgccgtcca tcctccagca
     1261 gttggaccgt ccgcacgcag ccggaaacga cctggatgca gtattccgcc ggatcgccct
     1321 gcgctatgat ttcgtcgccc cggccaaatt ggagtttctt tgccatggga gcgagtgcgt
     1381 cgaggatatg tcccggcgtg ggaaccgtgt taacacacgc acaagccggc tgcggaaaac
     1441 tggccttcaa cggcaatttg gcaccgccga acgaaactgc agcgctgccg gtcgaggcgt
     1501 cggacaacag ggcgagcatt ttgcgatctc ctcgggttat tatggacgcc atgaagacac
     1561 ggcccccggg ggcgccgaaa ttcgtttcgt cgcgtacgtt gaactaccta tggaccacct
     1621 gaccccccct cggacgacgg ccatcattca cgtcgtggac gacgacgacg cggtccggga
     1681 ttcactgcgc ttcctgctgg agcctgaggg ctggacggtg cgcacctacg gcaatgcgat
     1741 ggccctgctg gacacggaac tcggttcggc cggctgcgtc ctgaccgatt tccatatgcc
     1801 ggaaatcgac gggctggagc ttcaggcgcg gttggcggcg cggggcaccc tgttgccggt
     1861 aatcgtcata acaggccacg gcgacgtgtc cgcagcggtg cgtgccatgc gggcaggcgc
     1921 cgtggacttc ctcgaaaaac ccttctccga ggaagatctg atgaacgcca tccggcgggc
     1981 actggaggcg aaccgctgcg ccctcgcagc ctcggccggc gtcacgcagg cggcgcggcg
     2041 catcgccggg ctgacgccgc gcgaacgcga ggtgctggac cttctcgtga ccggaaagtc
     2101 caacaaggag atggccctcg tgctggggac cagcccgcgg acgatcgatg ttcatcgcgc
     2161 gcgggtgttc cagaaactgg atgcggactc gatccccgat ctcgtccacc tggtcctcgc
     2221 cgcccgccag gggcaatcgc cgtcatgacc gaccccttcg aaccgctcgc ccctcgtcgc
     2281 gacgaggggc acgccctgct ggccgcgatc acggcctcat ccaacgatgc catcgtggcc
     2341 aaggatctcg tcggcactgt cacctactgg aacgatgctg ccacccggct gttcggctat
     2401 accccggacg agatcatcgg caggtccatc acgctggtca tcccaccgga gcggatcggc
     2461 gaggagcaat cgatcctcga acgggtcggg cgcggcgagc ggctgacgca tttcgagacc
     2521 aggcgggtga ccaaggatgg acgggccatc gcggtatcgc tgacgatctc tcccatccac
     2581 gacaccgacg gcacgatcat cggggtatcc aagatcgctc gggatctcag cgagatgcag
     2641 cgcctgaacg gagcgctgca gcaacgcgag gccttgctca gctcggttct cgacaccgtc
     2701 ccggacggac tgatcgtcat cgatgaacgc ggcatcgtgc aatccttcag ccccgccgcc
     2761 gcacgcatgt tcggcttcag cccggccgag gtcgtcggcc ggaatgtcaa gatactgacg
     2821 cccagcagcc acaccgacgc ccacgattcc tacatcgaac gctacctggc caccggagag
     2881 cgccgcatca tcggcatcgg ccgggtggtg gtcgggcggc ggaaggacgg caccacattc
     2941 ccgatggaat tgcagatcgg cgaggcgttc gtcgatggaa cccgccgctt taccggcttc
     3001 gtgcgcgacc tgaccgaacg cgaggaccgg gatcgccgcc tggccgagtt gcaatcggag
     3061 ctgatccatg tcggacgcct cagcgaactc ggccaaatgg tctcggccct tgcccatgag
     3121 gtcaaccagc ccctgacggc gatggggaat tatctgatcg gcatccgacg cctgttgccc
     3181 aacgacacgc cgccggtcgt gcgccaggcg atcgacaaag tgatggaaca aagcgagcgg
     3241 gcgcgcggca tcgtgcagag cctgcgtggc ctggtgaaga aagagtcccg cccgcgggaa
     3301 gtcgtcaatc tcgaatccat gatcctcgag acgagcgccc tggtgatggt cggtgcgatg
     3361 cgcgccgtgc atctggatct gcgcatcgcc gacgatgccg cctatgcctt tctcgacaaa
     3421 gtgcaaatcc agcaggtgct gctcaacctg atgcgcaatg ccgtcgaagc catggccgcg
     3481 tccgatatcc gcacgctgac agtggcgacc acgcggctcg gtgagcgggt ggcaatccgg
     3541 gtcgccgata ccgggccagg cctttcggag acggtcaagt cccggctgtt ccagcccttc
     3601 gtcactacca agtcggaggg gctgggtgtc ggcctgtcga tctgccgtac gatcgtggag
     3661 acccacgggg gtgaattgac ggccgacagc gagcccggcc gcggtgccgc ctttcatttc
     3721 accgtgcccg cgacgcccgc gcagggcgat ggcgaagcgg ccagcggcgt gaccccgtac
     3781 tgatccaggt gccgtactga tccaggtcaa gagatcatcg gatgtctttt cgtagttttg
     3841 gatctcgccg gtgggccctg tgtccgccaa gacgctgcgt taccgcggcc atggaggcat
     3901 atggttgatt gtcaatccga tgagattgcc gtcgtggacg acgatgcagc ggtcctcgag
     3961 tcgttccagt tcatgctgga gttggcaggg tttcaggtcg cggcctattc gtcggcaatc
     4021 gcgttcctgg acagcgggcg cattcgcccg tgttgcctga tcctggacca gcacatgccg
     4081 ctgatgaccg ggctggagtt gacggccagg ctacgggcca gcgccatcga tgtgccggtc
     4141 ttgctggtta ccggtgcccc atctccggcg atcgtcgccc gagccgcgga acttggcgtc
     4201 gagaaagtgt tggagaagcc acccacggag ggtgatctgc tcagcttcgt ttcgatgcac
     4261 acctccggca gcgccgcttg agggtgagcc gatcaggtta cggtcaaacc cctccgcttg
     4321 gggtcgaacc gacgaagaaa atcgaaactg gataaccaga tgccatcggc tgccacgacg
     4381 tcaccgacgg cgcagtgaaa tgcgccgcct gtacacccgt tgcccttcaa tgtgatacga
     4441 aagagcacct gcccgctcgc agcaaaagct ccttggtgac acccccaagc gcccattcgc
     4501 gcaggcggct gtgcccatag gcgccggcaa tgatgacatc ggcggcctga tcgttcgcga
     4561 tcgcatcgag ttgtgcggca tcattctcca tcgcgagcgc cacgacgggt tccgccgcta
     4621 tcccgtcacg cctcagccaa cccacgacat ccgcgagacg ggcctgagcg gcaaccgttt
     4681 cttcgcccgg aacgatttcg cagatggcga cgtgatccgc ctgcttcagg agaggcaatg
     4741 cgtccagcac ggcgcgacga ctttcgcgcg aatccttcca gccgatcagc atccgcttga
     4801 agctgagctt ttcagcgttc gtcgggacaa tgagagcagg acgtccgagt tgcatgacca
     4861 ggtcgccgat atccacgtgg cgcgatgagt cgaagatcga tccgctgtga tccacgccgg
     4921 tgatcacgag atctgcacac cgcgcctggt ctgcgagata atcggccagc ggtgcgaatg
     4981 tcacggtcga acgccactcg agatttctgc cccgcccccg cagaacggca cgaaattcgt
     5041 cctcggcgtc gttggcttcc ttcgcaatct cgtcccggtc ctgctcgatg acgtcgcccg
     5101 agatgtagct gtctccatag agaattcgca acggctggca ggccgcgata cccaccacat
     5161 cggcattgaa ccggctcgcc aggtcggcgg cgatacgcag cagcttcgtg tttgggcgtc
     5221 ccagctccaa gtgtaccata aaggtcgtca cggttccgtc ctcctgtaat tttcatccca
     5281 tcgcggagaa tagaggtatg cgattagacc gctttgatct ggctcaacct cgaaagatac
     5341 ctcttggacc gtcgaggtgg caggcaccgt caccaggttt tgtcgccgga ttccgccgct
     5401 actgcgcctg ctggccgggc tgctgcgacc agagagggaa cggatcgccg tccagcccgt
     5461 acagccactc caactggttt gaacgccggc atcggtgacg cacagatccg acaaatcagc
     5521 cagccaaccg ccccgcgatc agcttcaacg cgtcggcgga gaaggtttcc tt
//
LOCUS       DATAVD010001525         2907 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1634564, whole genome shotgun sequence.
ACCESSION   DATAVD010001525 DATAVD010000000
VERSION     DATAVD010001525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2907
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1634564"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..731)
                     /locus_tag="VHX39_29265"
     CDS             complement(<1..731)
                     /locus_tag="VHX39_29265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995284.1"
                     /translation="MGDFLVVTHLADSAFDWLRARILVAAIAEQAVTVAVLTALLFVY
                     APPLRRLLGAKVLSLSGGATQQVLMVLVGIAPWFVLLLTFWFTILVFHDNGRETAVLR
                     LAESLTLAWAVIKLTSRLVRNENLARALAVLAFLVAALNIAGLIHPVVALLDSMAFYV
                     GTLRFSVLLLIQGAITLTVSIWVAGAVARIVDTRLDHLPGLTPAMQVLTSKLIRFTLL
                     TLAVVLALGSVGIDLTAFAVFSGAVG"
     gene            complement(882..1439)
                     /locus_tag="VHX39_29270"
     CDS             complement(882..1439)
                     /locus_tag="VHX39_29270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEX3995285.1"
                     /translation="MSHIPNLQTLVLNADMQPLSWGPLSVWSWQDALVAVLQERVNPV
                     INYDVEVHSTRQSFAIPSVVALKRFHKRRKVAFTRYHVFLRDRFSCQYCGETLPAKDL
                     TFDHIVPRSRGGMSSWSNVVTCCQADNLFKGSRSLKQSGLRLRSVPIEPTPHQIDEAA
                     KWHVSRENLHRTWLDFLYWDASLEA"
     gene            complement(1666..2313)
                     /locus_tag="VHX39_29275"
     CDS             complement(1666..2313)
                     /locus_tag="VHX39_29275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEX3995286.1"
                     /translation="MPSLDAIHWGPASKATPKQLVILCHGLGADAFDLIDLAPSWQHA
                     CPDALFASVHAPFSHDSGFGRQWWSVADRSPPVMEAGARTAAAYLHGFIDAELARLAL
                     PGDAYAIMGFSQGAMISLFTGLRHAVAPRAILAFSGALIGPETLAAELKNRAPVLLVH
                     GEADEAVPVARSHEAEAALAAAQVPVEAHYIPGLGHGIDDTGISLGGLALQRGFA"
     gene            2358..>2907
                     /locus_tag="VHX39_29280"
     CDS             2358..>2907
                     /locus_tag="VHX39_29280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HEX3995287.1"
                     /translation="MIVTRFAPSPTGFLHLGHAFSAHNAWKRARDAGGRFLLRLEDID
                     PARCRPDYADAILEDLAWLGLDWDGPVRVQSHHLPEYRAVLDQLAERRLVYPCFCSRT
                     DIATASAAPHGPDGAPLYPGTCRHRSPTERADRIAAGEPFALRLDMAAAVRPGLSYEE
                     ESTGRIACHPELFGDVVLARKDI"
BASE COUNT          606 a         1065 c          803 g          433 t
ORIGIN      
        1 ccgaccgcgc cggagaacac cgcgaacgcg gtcaaatcga tgccgaccga ccccaacgcc
       61 agaaccacgg ccagggtcag cagcgtgaac cgaataagtt tcgatgtcag cacctgcatg
      121 gccggcgtca ggccgggcaa atggtccagc cgcgtatcga caatgcgcgc cacggctccg
      181 gccacccaga tcgacaccgt caatgtgatc gcgccctgga tcagcaacag aacgctgaac
      241 cgcaacgtac ccacataaaa cgccatcgaa tcgagcagag ccaccaccgg gtggatcaga
      301 cccgcaatgt tcagcgccgc caccagaaat gccagaaccg ccagcgctcg ggccagattt
      361 tcgtttcgca caagccgcga cgtcagcttg atcaccgccc atgccagcgt caggctctca
      421 gccagccgca ggaccgccgt ttcgcggcca ttgtcatgaa aaaccaggat ggtgaaccag
      481 aatgtcagca gcagcacgaa ccacggtgcg atgccgacca gcaccatcag gacctgctgc
      541 gtggccccac ccgacaacga caggaccttg gcaccgagca gccggcgaag cgggggcgcg
      601 tagacaaaca gcagcgccgt caataccgcg accgtgaccg cctgctccgc gatcgcggca
      661 accagaatcc gagcgcgcaa ccagtcaaat gccgaatcgg ccagatgcgt gacaaccaga
      721 aaatcgccca ttcgtccgtt ctccagagag cggcgatcag tgccggtcgg agcatggccg
      781 tggaacgatg ctcatgaaca gacatggttt gcggccgggc actccgaaac ccgatctcgc
      841 ggacaattgg ccgcgaaccg ccgagaatca gcctctcacg gctaagcctc cagcgaggca
      901 tcccaataca ggaaatccag ccaggtccgg tgcaggttct cgcgtgagac gtgccacttc
      961 gccgcctcat cgatctgatg cggcgtcggc tctatcggta cgctccgcag ccgcaacccg
     1021 ctctgcttca gcgaccggct gcccttgaac agattatccg cctggcagca cgtcaccacg
     1081 ttgctccagc tactcatccc gccccgcgac cgaggcacga tgtgatcgaa cgtcagatcc
     1141 ttcgccggca acgtctcccc gcaatactgg caactgaacc ggtcgcgcag gaacacgtgg
     1201 taccgtgtga acgccacctt gcggcgctta tggaaccgct tcagcgccac caccgacggg
     1261 atcgcgaacg actgccgcgt cgaatgcact tccacgtcat agttgatgac cggattgacc
     1321 cgttcctgca gcaccgccac cagcgcgtcc tgccaggacc agaccgacag cggaccccag
     1381 ctcaacggct gcatatccgc gttcagtacc agggtctgaa ggttgggaat atggctcaca
     1441 ggcgctgccc ccggcggagc gccgcgctca acatgaaatc gggcaactgc catccgccgt
     1501 caggcaaaag cgactcccat tcaacaggag cacaacacct gggcgcttag aaatcgtcga
     1561 gtcgccagat attgtgcgcc gccgaaaacc tgcgggattt atgacagacc gaccatcgcg
     1621 ccgcaacccg ctcctgcgaa ccgtgtccgc gacttcattg tttcgtcacg caaatccccg
     1681 ttgcagcgcc agcccgccca gggagatccc ggtatcatcg atcccatgcc ccagaccggg
     1741 gatatagtgc gcctccaccg gcacctgtgc ggcggccagc gcggcctccg cctcatgcga
     1801 ccgggccacg ggaaccgcct catccgcctc gccatgcacc agcagcaccg gcgcccggtt
     1861 cttgagttcc gcagccaagg tctccggccc gatcagcgcc cccgaaaacg ccaggatggc
     1921 gcgcggcgca accgcatgcc gcagcccggt gaacagcgaa atcatcgcgc cctgactgaa
     1981 ccccatgatc gcataggcat cgcccggcaa tgccagccgg gccagctccg catcgataaa
     2041 cccatgcaga tacgccgcgg cggtccgagc ccctgcctcc atcaccggcg gcgaccggtc
     2101 ggcgacgctc caccattgcc gcccgaaccc agaatcatgc gaaaacggcg catgcaccga
     2161 cgcaaacaac gcatccggac aggcatgctg ccacgacggc gccagatcga tcaggtcgaa
     2221 cgcatcagcc cccagcccat ggcaaaggat caccaactgc ttgggcgtcg ccttggaagc
     2281 cggtccccag tgaatcgcgt cgaggcttgg catgcacaac tctcccgttt ccgcgccgat
     2341 acgctaatct atcctggatg attgtcaccc gcttcgcgcc cagcccgacc ggcttcctgc
     2401 atctgggaca cgctttctcc gcccacaacg cctggaagcg ggcgagggac gcaggcggcc
     2461 gatttctgct ccgtctggag gacatcgatc cagcccgctg ccgcccagac tacgccgacg
     2521 ccatcctcga agacctggca tggctgggcc tcgactggga cggaccggtc cgcgtccagt
     2581 cacaccattt gccggaatac cgcgctgtac tggaccaatt ggcggaacgc cgcctcgtct
     2641 acccctgctt ttgctcgcga accgatatcg caaccgcctc ggccgcgccg cacggcccgg
     2701 acggcgcgcc gctctatccc ggcacctgcc ggcaccgttc gccgaccgaa cgagccgacc
     2761 gcatcgccgc cggcgaaccg ttcgccctgc ggctcgacat ggccgccgcg gtccgccccg
     2821 gcctatcgta tgaagaggaa tccaccggcc gcatcgcttg tcacccggaa ttattcggtg
     2881 acgtcgtgct cgctcgtaag gacatac
//
LOCUS       DATAVD010001526         3552 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_704675, whole genome shotgun sequence.
ACCESSION   DATAVD010001526 DATAVD010000000
VERSION     DATAVD010001526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3552
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_704675"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..229
                     /locus_tag="VHX39_29285"
     CDS             <1..229
                     /locus_tag="VHX39_29285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995288.1"
                     /translation="NSWVVAIAAQYRLLAGRVGAPQLVAEASGAVTIHDCLDPFARAW
                     NANFHTAFAKMRDMCVTGLVLRYGRRCLSRR"
     gene            complement(411..1334)
                     /locus_tag="VHX39_29290"
     CDS             complement(411..1334)
                     /locus_tag="VHX39_29290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HEX3995289.1"
                     /translation="MSEFVSICDVGPRDGLQIAKTRMTTDDKVRWIASIAAAGVREIE
                     VGSYVPPRVIPQLADTAEIVSRVLTLLPGLTVQALAPNLRGAQNAYNGGVHKISMPIS
                     VSEGHSRANLNRTPAESVVMMREVMQWLRDQPRKVPVVAGASTAFGCSIDGVVTTQQT
                     VALCKGLADAGVDQIMLADTVGYAHPAQIKEVVRAVREEIGPVLYGLHLHDTCGLGIA
                     NALAGLEEGIRAFDSCLAGLGGCPYAPGASGNVVTEDLVFMLESMGFSTGIDLQKLLD
                     ARDVLHAGLPDEALHGQLAKARIPPTFRHAA"
     gene            complement(1331..2170)
                     /locus_tag="VHX39_29295"
     CDS             complement(1331..2170)
                     /locus_tag="VHX39_29295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3995290.1"
                     /translation="MPDRFRRLERSEWSDGNRAGVPTDCFLEGPCFDAQGRLHVVDIP
                     YGRVFRVEGDDWTLVAEYPGWPNGLKVQPDGILIAADYRHGLVRIDPATGATSAVIQT
                     VLSEGFKGLNDLTLHDDESILFTDQGQTGLQDPTGRVYRLHKDGRLDRLLATGPSPNG
                     LVLNTAQTHLYVAMTRSCEVWRIVLRNDAIVGKAQCFARVPPGLVGPDGLAMDRHDRL
                     YISNPGHGCIWVVDPHGVPLYRVQSHHGRMTTNCALAPDGRTLVITESETGSILVAEI
                     PDP"
     gene            2320..3012
                     /locus_tag="VHX39_29300"
     CDS             2320..3012
                     /locus_tag="VHX39_29300"
                     /inference="COORDINATES: protein motif:HMM:NF015962.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0050532 - 2-phosphosulfolactate
                     phosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-phosphosulfolactate phosphatase"
                     /protein_id="HEX3995291.1"
                     /translation="MDIRIESLLGGAAHATGVVGIIDVFRAFSTAAVALANGASRIIM
                     VSGVEEALALRDNGEGQLVMGEVEGRAPAGFDFGNSPLEASQTDVRGKTIIQRTSAGT
                     RGIAAAARAERLYAASLVTAKATARCMLAGNPEHITLVAMGKNALERTDEDELCALHL
                     RNLLQGRPGDGNAVRQVILAGGEAARFFDASRPYLHREDLEIALDIDRYDFAIRVQPE
                     GGRPVARMERIG"
     gene            3080..>3552
                     /locus_tag="VHX39_29305"
     CDS             3080..>3552
                     /locus_tag="VHX39_29305"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995292.1"
                     /translation="MSAGIGAVPGAFFWGWMGDRIGRRKVFMLTALNVAGATGVLYFT
                     PSVDAWIPGWMYLAFFRFFVGFGNAGLIAVDIPLVQEFVPASKRGWVSGLTTVLLPAG
                     NIMGAVAGAYLAPTISWRELFQYPRSMAAACLIGLSQTGGVGLLMWITALFVMVL"
BASE COUNT          630 a         1149 c         1134 g          639 t
ORIGIN      
        1 caattcctgg gtggtggcga ttgccgcaca gtaccggtta cttgcaggac gagttggtgc
       61 cccacagctg gtcgccgaag cgtccggcgc tgtcaccatt catgactgcc ttgatccgtt
      121 cgcgcgcgcg tggaacgcaa actttcacac cgcctttgcc aaaatgcggg acatgtgcgt
      181 taccgggctc gtgctccggt acgggcgtcg ctgcctgagc agacgctagc gtacagacga
      241 cggcgaggac ttgaagcgtg actcgccggt acagagcaaa cgacatggtt gcatcccctg
      301 gcatcctggc catcgcgtgt tcaggtgcga gattagccgg ggaaacttaa tgtcggctta
      361 aagcgccagc ccaccgggcc acgccatcgt cgccgaaccg gaacaattgc ttacgcggca
      421 tggcggaaag tcggcggaat gcgggctttc gccagttgcc cgtgcaacgc ctcgtcgggc
      481 agtccggcat gcagcacatc tcgagcatcc agcagcttct gcaggtcgat gccagtggaa
      541 aaacccatgc tctcgagcat gaagaccaga tcctcggtca cgacgttgcc cgaggcgccc
      601 ggcgcataag gacagccgcc cagacccgcg agacaggaat cgaacgcgcg tatgccctcc
      661 tcgaggccgg ccagtgcatt ggcgatgccg aggccgcagg tgtcgtgcaa atgcagccca
      721 tacaacaccg gtccgatttc ctcgcgcacc gcccggacca cttccttgat ctgcgccgga
      781 tgcgcgtagc cgacggtatc cgccagcatg atctgatcga cgccggcatc agccaggccc
      841 ttgcacaatg cgacagtttg ctgcgtcgtc accaccccgt cgatcgagca accgaaggct
      901 gtcgaagctc ccgccacaac cggcactttc cttggttgat cccgcagcca ttgcatgact
      961 tcccgcatca tgacgacgga ttccgccggg gtgcggttga ggttggcccg gctgtgaccc
     1021 tcgctgaccg agatcggcat gctgattttg tgcacgcccc cgttatatgc gttctgtgca
     1081 ccccgcagat tgggcgccag cgcctgcact gtcaggccag gcagcagcgt cagcacgcgg
     1141 gaaacgatct ccgccgtatc ggccagttgc gggatgacgc gcggcgggac gtagctgccg
     1201 acttcgattt cccgcacccc ggcggcggcg atcgaggcga tccaacgcac tttgtcgtcc
     1261 gtcgtcatgc gggttttggc gatctgcagc ccgtcgcgcg ggccaacatc gcatatggaa
     1321 acaaattcgc tcatgggtcg gggatctccg ctacgaggat gctgccggtc tctgactcgg
     1381 tgatgacgag ggtccgtccg tccggcgcga gggcacaatt cgtggtcatc cggccgtggt
     1441 gcgattgcac gcgatagagc ggcacgccgt gcggatcgac cacccagatg cagccatggc
     1501 cggggttgga aatatacaac cggtcgtgcc gatccatcgc cagcccgtcc ggtccgacga
     1561 ggccaggcgg cacacgggca aaacattgcg ccttgccgac gatcgcgtcg ttgcgcaaaa
     1621 caattcgcca gacctcgcag gatcgtgtca tcgccacata cagatgagtc tgcgccgtgt
     1681 tcagcaccag cccgttcgga ctggggccgg tggcgagcaa ccggtcgagg cggccgtcct
     1741 tgtgcagccg atacacccgg cccgtcggat cctgcagccc ggtctggccc tggtcggtga
     1801 acaggatcga ctcgtcgtcg tgcagggtca ggtcgttcag gcctttgaag ccctcactga
     1861 gcacggtctg gatcactgcc gaagtcgccc cggtcgccgg atcgatccgc accaggccgt
     1921 gccggtaatc ggccgcgatc aggatgccgt ccggctgcac tttcagcccg tttggccagc
     1981 ccggatattc ggcgaccaag gtccagtcgt cgccctcgac ccgaaacacc ctcccatacg
     2041 gaatgtccac cacatgcagc cttccctggg cgtcgaagca cgggccctcg aggaaacagt
     2101 cggttggcac gccggcgcga ttgccgtcgg accactcgga gcgttccagg cggcgaaaac
     2161 ggtcgggcac gcgggtttgc acacgggcgg aaagttcttt gggaggggcg aaccacatga
     2221 ccgcggacag tgaggcgggc cggcagcgaa ggcaagtctg gtccacccat ggcaatcggg
     2281 gcacagtcac cggcgtcatc gaacacggac gtttccggca tggacattcg cattgaaagc
     2341 ctgctcggcg gtgccgcaca cgcgaccggc gtggtgggga tcatcgacgt cttccgcgcc
     2401 ttctccaccg ctgcggtcgc gctggccaac ggcgcctcgc ggatcattat ggtcagcggc
     2461 gtcgaagagg ccctggcgct acgcgacaac ggcgagggac agctggtcat gggcgaggtc
     2521 gaaggccgcg cccctgccgg cttcgatttc ggcaactcgc cgctcgaggc atcgcagacc
     2581 gatgtcagag gcaaaacgat catccaacgg accagcgccg gcaccagagg catcgcagcg
     2641 gcagcgcgag cggaacggct ttatgcggcc tcgctggtca ctgccaaagc caccgcgcgg
     2701 tgtatgctcg ccggcaatcc cgagcacatc acgttggtcg ccatgggtaa gaatgcgctc
     2761 gagcggaccg acgaggatga attatgcgca ctgcatttgc gcaacctgtt gcagggaagg
     2821 cccggggacg ggaatgccgt gcgccaggtg atcctggccg gaggcgaggc cgcacgattc
     2881 ttcgacgcgt ctcggccata cttgcatcgc gaggatctgg agatcgcgct cgacatcgac
     2941 cgttacgatt ttgcgataag agtgcagccg gaaggcggcc ggccggtggc ccgcatggag
     3001 cgcatcggct gacggggatg tcctcgcatt catcctgaaa gactggcatc tgacctacgg
     3061 ccaatccgcc gccattctgg tgtcggcggg tatcggcgct gtccccggcg cgttcttctg
     3121 gggctggatg ggcgaccgca tcggccgccg caaagtcttc atgctgaccg cgctgaatgt
     3181 cgccggcgcg accggggtgc tgtatttcac gcccagcgtc gacgcctgga tccccggctg
     3241 gatgtacctg gcgttcttcc gtttctttgt cggcttcggc aacgccgggc tgattgccgt
     3301 cgatatcccg ctggtgcagg aattcgtccc tgcctcgaaa cgaggctggg tcagcggcct
     3361 gaccaccgtc ctgctgcccg ccggcaacat catgggcgcg gtcgcgggcg cgtacctcgc
     3421 cccgacgatc agctggcgcg aattgtttca atatcccaga agtatggccg cggcctgcct
     3481 gatcggtctg agccagaccg gcggcgtcgg tctgctgatg tggatcactg cactgttcgt
     3541 gatggtgctg aa
//
LOCUS       DATAVD010001527        15591 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1074328, whole genome shotgun sequence.
ACCESSION   DATAVD010001527 DATAVD010000000
VERSION     DATAVD010001527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 15591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15591
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1074328"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..696
                     /locus_tag="VHX39_29310"
     CDS             <1..696
                     /locus_tag="VHX39_29310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995293.1"
                     /translation="LAMLLSTSTTGLLTLAVGLPLILVLTAARADGQALARLGKTGGM
                     LMLVGAIALTPVVIMKPALLDAVSSVADSTLTKGDSDSFSERTANDLAALDTVSTTYG
                     LGVGWGSFRTSSFVPGLLANAGVFGVVAVLWLALRTTLLVRRRTPAMRDHPGCLVVGG
                     FSAALCGQLTAALFSAPTIASLAFFLQLGCVIGVSARISIESSLPRSNSFRRPGPART
                     GGATATVQGGFVE"
     gene            693..1787
                     /locus_tag="VHX39_29315"
     CDS             693..1787
                     /locus_tag="VHX39_29315"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 1 protein"
                     /protein_id="HEX3995294.1"
                     /translation="MMPAVFLNGRFLGQSVSGVQRFSLEITAAIDRLMADGEWPQTTV
                     LTPRSAGEDAGRCVGSSFKQLQLQEVGRMRGHVWEQTELPLAARGGVLLNLGNTAPML
                     TGQRQVVVIHDAGVFDTPESYSLQFRTWYKALQHCLVRTGAQVATVSKFSRDRIVARL
                     GLDPTGVVVVYEGADHILREQADLSVLQRNDLRPRQFALVVSNRVAHKNLAALQGAAA
                     ALERRGMVVAVAGATNTAVFQDIHGLGFAERRLGRVSDAELRALYENAACLLFPSRYE
                     GFGLPPVEAMACGCPVLAARGNAVEEICGDSALYFVNAEKQSIIDAIERLLDEPGLAE
                     TLRTDGRARAAALSWDASARKLGDAVRRVR"
     gene            1921..2691
                     /locus_tag="VHX39_29320"
     CDS             1921..2691
                     /locus_tag="VHX39_29320"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX3995295.1"
                     /translation="MPPVGDLQAQPILPDPARPGTLCDAAVRTAEVRHRLPPGLLFAI
                     SKVESGRLDPAVNRVEPWPWTVQAEGKGIYFDSKAKAVRWVQDAMARGVTSIDTGCLQ
                     VNLFYHPHAFATLEDAFDPERNADYAARFLLQLYAAAGDWRQAEGFYHSQTLALATSY
                     RERVERVMSGGTPNWAATRKPPTTLDRLGTAWRATFADNDPAPANPTPADLHMHDWSA
                     LLHTPAKRQAQPSHPLRPQSPRRYAGPSYLLSSVGRPQ"
     gene            2688..3323
                     /locus_tag="VHX39_29325"
     CDS             2688..3323
                     /locus_tag="VHX39_29325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HEX3995296.1"
                     /translation="MIPMISVQASKQEVAHFASKQGTGPFRSAKAGLAAVCLLLAACS
                     PGSSLPPLAATPAGPYRLGVGEDVRVITFGEERLTGQFRVNDRGDIAVPLLGTIQASG
                     LTTTQLEQSIDKQLIGKKVLLNPSVSVEVLQYRPVFILGEVAKPGQYPYQPGMTVLTA
                     VAIAGGFTYRAETGYASILRATDNGHTVEGRVPRGMEVRPGDVIDVFERYF"
     gene            complement(3665..4948)
                     /locus_tag="VHX39_29330"
     CDS             complement(3665..4948)
                     /locus_tag="VHX39_29330"
                     /inference="COORDINATES: protein motif:HMM:NF021589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEX3995297.1"
                     /translation="MPWLTGLALTAWPMALHAQSIDSYFPSGVGGYDQQLGVTVQSRA
                     RPLYAPPGINLDSFNIQPRLDQSLFYNSNPTGISGSGSWGSSTSASVSAGSLWSRNSL
                     GLSLGVDTFRYFTLPTLNHTNWNIGLGGGYTIGDNQLLLAYSHQSNAQLGTSIGTVQT
                     QTPILDQTDSAQISYTFNFSRFSVTPDFSVSAYRFGTATVLGMPLNQQYLDRNVVAGG
                     VTTRYAMSDEGGLLLVMRGIDSTYINSQPGVPTNDSKNFLLLGGIDYQVKGVWRYRLL
                     AGVEMSTFAASQYTSSTSPTVQASVIWTPTGTVTVTGTLARSVQAPQSAGTNGFVLTS
                     ANLVADYEFRRNILVQARGGLQYAQYLQGGSQTNFTLGAGVSWLLNRNLRLSLDYDTT
                     EQSGSTNFSTPTNPNTLVSGHYNQSLMALTLHVAF"
     gene            complement(5207..5783)
                     /locus_tag="VHX39_29335"
                     /pseudo
     CDS             complement(5207..5783)
                     /locus_tag="VHX39_29335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_085938460.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     misc_feature    complement(5442..5557)
                     /locus_tag="VHX39_29335"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01497"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="AL1L pseudoknot; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /pseudo
                     /db_xref="RFAM:RF01497"
     gene            complement(5920..6774)
                     /locus_tag="VHX39_29340"
     CDS             complement(5920..6774)
                     /locus_tag="VHX39_29340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995298.1"
                     /translation="MFDDRRNGAATLVCMLAGYEPELWRFVMPRFRAALPEADVCIVS
                     PGLRRDDLADLCRREEWSYLGTATNDVALAQNVCYRLHDRAQMIVKLDEDMFLLPDTI
                     TGLLAEYRDIKAEGVVDPSFVAPMIPLNGFCYRYLLEMLGLLDDYEAVFGRAQLATSG
                     LAIHTDPAAARWIWERTAPLAATAARLHSLERRVLLCPIQFSIGVITFERRFWEQMGY
                     FLVHRHRLLAGLSTLGGDEAYICARAVELSRPAVVTTAVLAGHFSFEPQYAELKALLN
                     ERPELFSG"
     gene            7447..8886
                     /locus_tag="VHX39_29345"
     CDS             7447..8886
                     /locus_tag="VHX39_29345"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase"
                     /protein_id="HEX3995299.1"
                     /translation="MAVRRAESLFSNLCYLGAARAGAVCMNLIATSRLAHALGAQNFG
                     VNSFAASYVSYFLIVVNWGFDTFLTREIAADGSRLRSLVSSVIGMRLLLAAAMTILLF
                     GSMTLLHVSEMARVVVLIQGANLFGSAIGLTCVYQGLQRMRLVAWREIAASVINAAGI
                     LWLVHSPDDLVFAACIAVGTQMMTNLALLTHYATEFGIPRIRLPGRAEFEVIRNSMSF
                     FWSLLMITITYNTHIVMLGLTRSATDVGLFSAGWKLFILAIAVPNLIATLFLPRIANL
                     TTQVAERERSMELFLKGIIVCTIPTTVFGCLLAPHILTLLFGPAYLPASQTVIVLLLN
                     ALVVALNIGFGTSMLAIGRQNAFLRVMAIGAGTGILLNLILIPYCGGEGAALATLVDE
                     TVILSMLLRKCPEMPGPPIIDFTIRCAIAIIPAAGAVQLFPSLPLVSESALWTVIGGG
                     TVGGIVYVLVLRLLRIDLMHFAADLRRLQ"
     gene            9222..9482
                     /locus_tag="VHX39_29350"
     CDS             9222..9482
                     /locus_tag="VHX39_29350"
                     /inference="COORDINATES: protein motif:HMM:NF012759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEX3995300.1"
                     /translation="MHLSDSDILKRLTPIFRNVFDDQSLDPTPEMTADGIAGWDSMSQ
                     VTLAVEVEHDFGVKFRSAEMEELSSVRELIELIKSRAVSTTA"
     gene            9500..11119
                     /locus_tag="VHX39_29355"
     CDS             9500..11119
                     /locus_tag="VHX39_29355"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HEX3995301.1"
                     /translation="MLFNSYTFIFAFLPVALAGFHLASRFGRRPAAAWLILTSFVFYG
                     WWSPTFVLLLIASTLFNYGASEAVAAFESRPRLRTTCLCLAITVNLLVLCYYKYLTTV
                     LHALTNLGLLDDPVSAIVLPLGISFFTFTQIGYLIDRNQGLVKESGFLNYLLFVTFFP
                     HLIAGPILHHREIMPQFADGRSYRFSYENIAAGMTIFIMGLVKKCLLADPLSATVIAG
                     LGNIHHLSMLSAWNVALSYSLQLYFDFSGYSDMAIGLARMFNIHFPLNFNSPYKAASI
                     IDHWQRWHMTLSRYLRLYLYNPISLAVTRWRVAHGLGITRNAQATFGGFVTMMLVPTL
                     ITMLLAGIWHGAGLQFVIFGLLHGTYLTINHAFRIFRSGKPRPAHLQPVMLRCSNILL
                     TYLAALVASIFFRAASVGSGFSLLGGMIGLHGAGSIALPMVLLAKLGGMGQSLMGSGF
                     VSVVSILDWTAGVAHFGWLIVLYAIVWGMPNTQQIMRNYIEPSLGRVTAGPLPQFAWR
                     PNRGWAVVVGALTSIGILAIGGTTEFLYFQF"
     gene            11127..12296
                     /locus_tag="VHX39_29360"
     CDS             11127..12296
                     /locus_tag="VHX39_29360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995302.1"
                     /translation="MSELQAPDVSLFAREQVSRHPSGKAFRHRDVDEATRASRSARGF
                     VAWVLISFLASFGLVWIYVWTMPMAFLDRDYPVWIAKRAMLDTCRLGTVSVFGDSRTM
                     AAVKPDAMPLPVTNFALSGTSPLETYFAVQRALRCPTPPKLVVIAHGALKFALDSDYW
                     VFSARAGFLDYAEMRSVEAEAARLHDHELEDLRRGDEFGPAVRERLFALRYPPFYFDS
                     LVNGFLFARWFNNRHAMAEALRTSGHMTFGAASGDSGVAGEGGSRAFQPSPLVDFYFD
                     KTLALLAAHHVPVVFLSMPVNQATFDDMTPQLQQKFDAYLRTKADQFPGLRVVGPPIP
                     CWPNRFYGDSWHFNETGATAFSRELGPWLQAVLADGPAQPLPNHCDTTENLANRG"
     gene            12446..14137
                     /locus_tag="VHX39_29365"
     CDS             12446..14137
                     /locus_tag="VHX39_29365"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3995303.1"
                     /translation="MIAPSTIEPHDISLTHGNAAVQPVTFGGCFGWLHSASGSGVRDI
                     GVVLCQGVGRDASNAHRSFRILADRLAAAGYATLRFDYPGTGDSDEPVVELWDAWQNS
                     LTDAVACLRARTGVSRLVFIGLRAGAIVATTVAAIRSDAVGLVLLEPTLRGKSYMTQL
                     AVEARLRARDARRDAPGIEIDGLHLGPSTIERLSAIDLRQTVFGPGFAVAAFTQAPSS
                     LLSACAAAWQAQGAAVAIHGFDGLGGLLRPSHLADEPLVDVTPIVAWLEGAIPTTRVP
                     LPIIAPSPATLRPTGCVETAIRFGTENTLFGILCRSGSHAPVESAVVICNTGGDPHHG
                     FARFSVRLARRLASEGVASLRLDFAGMGDSPSRTAEGDEDVTHVFSVDRRADIAAAVT
                     ALQAAGYRRFAVNGLCSGAYHAFQAAVSDERIDAQLLVNLPWFSLRYDRPGPASVARN
                     AMRTLSQRQVSSLMLFAERDAGLTALNTHFGEGGADLPAFPGATAATLADVDHDLTTH
                     AMQDVVTLRMIAFLRDLGWIPAIATSRPAMAACYPVALTAAGKEQSVESDQVLAW"
     gene            14153..14398
                     /locus_tag="VHX39_29370"
     CDS             14153..14398
                     /locus_tag="VHX39_29370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995304.1"
                     /translation="MSIRSVIMEQVTKVAEQQRQPLAPLHDSLPLLKSGLDSLSIAII
                     VASLDDELGLDPLSASDDVEFPVTLGAFIRLYENAAA"
     gene            14385..>15591
                     /locus_tag="VHX39_29375"
     CDS             14385..>15591
                     /locus_tag="VHX39_29375"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3995305.1"
                     /translation="MLPRSRLSLWDLVAPQEASPTRFLADPADRLALRDLAGTSLFGE
                     RRETLRGRSVMISTERQFIAALMLIELDGIASRLVICTPDLSPDHVKAAIADAEVEVV
                     VSDGGGPAAGLDVSVETIVGGGQMHDIAGCAARDVETEWALFTSGTTGRPKIVLHSLA
                     GLTGPQKDKGTARGDVVWSTFYDIRRYGGLQIFLRAMAGGGSLVLSDAHETPGAFLAR
                     AGANGVKQISGTPSHWRRALMSGALASLKPDYVRLSGETADQTILDALQRSFPDVPVV
                     HAFASTEAGVGFEVRDGVAGFPVSVLDSQAGVEMRVLDGSLRIRSSRTATRYVGANAA
                     LTDAEGFVDTGDLLERRGDRYYFAGRREGVINVGGAKVHPETVEAVINRHPAVSMSRV
                     SARKSPITGA"
BASE COUNT         2687 a         4783 c         4877 g         3244 t
ORIGIN      
        1 ctggcaatgc tgctgtcgac ttcgaccacc gggcttctga cgcttgcggt cggtctgcct
       61 ttgattctgg tgttgaccgc ggcacgggcg gacggtcagg cgctcgcgcg attaggcaaa
      121 acgggcggca tgctgatgct ggttggtgcc atcgcactga cgccggtcgt gatcatgaag
      181 cccgcgctgc tcgatgccgt cagttccgtg gcggactcca ccctgaccaa aggcgacagc
      241 gattcgtttt ccgaacggac agcgaatgat ttggcggcgc tggacacggt gagcacgacc
      301 tacggtctgg gcgttgggtg gggcagcttc cgcacatcaa gcttcgtccc gggcttattg
      361 gcaaatgcgg gtgtcttcgg cgttgtggct gtgctgtggc tggctctgcg cacgacgcta
      421 ctcgtgcgcc gccgtacgcc cgcgatgcga gaccatcccg gatgccttgt ggtgggcggt
      481 ttctccgccg cgctttgcgg ccagctcacg gcggcactgt tctccgcgcc gaccatcgct
      541 tcactggcgt tctttcttca actcggctgc gtgatcggcg tgtccgcacg aatttcgatc
      601 gagtccagcc tgccgaggtc gaacagcttc aggcgacccg gaccggcgcg gaccggtggt
      661 gcgacggcaa ccgtgcaggg gggctttgtg gaatgatgcc ggcagttttt ctcaacggcc
      721 ggttcctcgg ccaatcggtc agcggcgtgc agcgcttttc gctggagata acggcggcga
      781 tcgaccggtt gatggccgac ggcgagtggc cccagacaac cgtattgacg cccagatcgg
      841 cgggagaaga cgccggtcgt tgcgtgggat catccttcaa gcaactgcag ttgcaggagg
      901 tcggacggat gcgggggcac gtctgggaac agacggaatt gccgctggcc gcacgcggcg
      961 gcgtcctgct taatctcggc aacacggcgc cgatgctgac cggacagcga caggtggtgg
     1021 tcattcatga tgccggggtg tttgacacac cggagtcgta ttcgttgcaa ttccgcacct
     1081 ggtacaaggc gctgcagcat tgcctggtgc ggacgggcgc gcaggtggca acggtttcaa
     1141 aattttcccg cgatcgcatc gtcgcacggc tgggcctcga tccgacgggt gtcgtcgtcg
     1201 tctacgaggg cgccgatcac atccttcggg agcaggccga ccttagtgtg ctgcagcgaa
     1261 acgacctgcg cccgcggcaa ttcgccctgg ttgtcagcaa tcgcgtggcg cacaagaatc
     1321 ttgccgcgct gcagggggcg gccgcggcac tggagcggcg tggcatggtg gtcgccgttg
     1381 cgggtgcaac caacaccgct gtatttcagg acattcatgg gctcggtttt gccgaacgcc
     1441 gtctgggtcg cgtcagcgat gccgaattgc gtgcgctcta cgaaaatgcc gcctgcctgt
     1501 tgttcccgtc ccgctatgag ggtttcggcc tgccgcctgt ggaggcgatg gcctgcggct
     1561 gtccggttct cgcggcgcgc ggcaacgctg tcgaggagat ttgcggtgac agcgcgctct
     1621 acttcgtcaa cgcggaaaag cagtcgatca tcgatgcgat cgagcggttg ctggacgaac
     1681 ccggccttgc cgagacgttg cgaacggacg gacgggctcg cgccgctgcc ctgagttggg
     1741 atgcttcggc acgcaagttg ggcgatgccg tgagacgcgt gcggtagggc cggagaaatg
     1801 tccgttgcaa tccccggctt gtcgcctttt gttcgatgcc tgtgggtcgc ggccctgctg
     1861 gccgcatcgg ccagcagggc ctggtcaggt tcgctcgacg ccaagcggca agcgctgccg
     1921 atgcctccgg tcggggacct tcaggcgcaa ccgatcctgc ctgatccggc gcggccgggt
     1981 acattgtgcg acgctgccgt ccggacggcg gaagtccggc accggctgcc gccgggattg
     2041 ctgttcgcca tcagcaaagt ggaatccggc cggttggatc cggccgtgaa ccgggttgag
     2101 ccttggccct ggaccgtgca ggccgaaggc aaaggcatct atttcgacag caaggcgaag
     2161 gcggtccgat gggtgcagga cgccatggcg cgcggcgtta cctcgatcga taccggctgc
     2221 ctgcaggtga acctgttcta tcatccccac gccttcgcga cccttgagga tgccttcgac
     2281 ccggaacgca atgccgatta cgcagcccgt tttctgcttc agctctatgc cgcggcgggg
     2341 gactggcggc aggccgaagg gttctatcat tcccagacgc ttgcgctcgc gacatcgtat
     2401 cgagagcggg tcgaaagagt catgagcggc ggaaccccga actgggcggc gacacggaag
     2461 ccaccgacca ctttggatcg actcggcacc gcttggcgcg cgacattcgc cgacaacgac
     2521 ccggcgccgg cgaatcccac accggcagat ctgcacatgc acgactggag cgccttgttg
     2581 cacacgcccg caaagcgtca ggcacaaccg tcccacccac tacggccgca atcaccgcgg
     2641 cgatacgccg gcccatcgta cttattatct agcgtaggga gaccgcaatg ataccgatga
     2701 tttctgtcca agcgtcaaaa caggaagttg cccacttcgc ttcgaagcag ggcaccggac
     2761 cattccggtc cgccaaggcc ggcttggcgg cagtgtgcct gctgctggcc gcctgctcgc
     2821 cgggatcaag cctgccgccg ctggcggcta cgccggccgg accctatcgg cttggcgtcg
     2881 gtgaagacgt gcgtgtcatc accttcggcg aggaacggct caccggacag tttcgggtca
     2941 acgaccgggg cgatatcgcc gtccctctgc ttgggaccat tcaggccagc ggactgacca
     3001 cgacccagtt ggagcagagc attgacaagc aacttatcgg caagaaggtt ttgctgaatc
     3061 ccagcgtctc ggtcgaggtc ttgcaatatc ggccggtgtt catcctgggt gaggtcgcca
     3121 agccaggcca atacccctat cagccgggga tgacggtgct gaccgcggtg gcgatcgccg
     3181 gcggtttcac ttaccgtgcc gagaccggat acgcttccat tctgcgcgcc accgacaacg
     3241 ggcatacggt cgaaggccgc gtgccacgcg gcatggaggt gcgacccggc gatgtcatcg
     3301 acgtattcga acgatatttc taagcgccga tgcgggaatg gctttcgggg ggggatgacc
     3361 gagcgaaagc ggagtcatcc cgatctgtta tcgcgcatca gagaagcgcg ataggtcgga
     3421 gttttgtctg atactaatcg tccttgatgt tgacccatcg gcagcgccgt gcagccgtca
     3481 tggcgagcgc aggctcgcca tccatgcctt tgtttccgct cgtaaaaggc gtggataccg
     3541 gcatgcgccg gcatgacgga cggggtcaac cgaagagtct gcatcaatgc cggctggtat
     3601 gagtgaccgt ttcaggtggg aaggcgcggt cacagcgtga ctcgcgcttt gccgcgattg
     3661 ggcgctagaa cgccacgtgc agcgtcagcg ccatcaggct ttggttgtag tggcccgaga
     3721 cgagcgtgtt gggattggtc ggcgtcgaga agttggtgct gccagactgc tccgtggtgt
     3781 cataatcgag cgagagccgc aaattgcggt tcagcagcca ggagacacct gcgcccagcg
     3841 tgaaattggt ttgcgagccg ccttggaggt attgggcata ttgtaggcca cctcgcgcct
     3901 ggacgaggat attgcgcctg aactcatagt cggcgaccag atttgcgctt gttagaacaa
     3961 agccgttcgt ccccgcggac tggggtgcct gaacggagcg agccagggtg ccggtgacgg
     4021 ttacggtgcc ggtcggggtc cagatgacgc tcgcctgcac ggtcggtgac gtgctggagg
     4081 tatattgcga tgcggcaaag gtgctcattt ccacgccagc cagcaggcgg tagcgccaga
     4141 cacccttgac ctgataatcg atcccaccca gcagcaggaa attcttggaa tcgttggtgg
     4201 gcacgccggg ctgcgaattg atgtatgtgc tgtcgatgcc gcgcatgacg agcagcagac
     4261 cgccttcgtc gctcatcgcg tatcgggtgg ttacgccgcc ggccacgacg ttccgatcga
     4321 gatactgctg gttcaagggc atgcccagca ctgtcgcggt gccaaaccgg taagcgctga
     4381 cgctgaaatc cggtgtcacc gaaaagcggc tgaaattgaa cgtgtagctg atttgggccg
     4441 aatccgtctg gtcgaggata ggggtctggg tctgcaccgt tccgatgctg gtgccgagct
     4501 gggcgttgga ctgatgcgaa taggccagca aaagctggtt gtcgccgatc gtgtagccgc
     4561 cacctaaccc aatattccag ttggtatggt tcagtgtcgg cagcgtaaag taccggaacg
     4621 tgtcgacgcc gagcgacaga cccaggctgt tgcgcgacca gagtgatccg gcagaaaccg
     4681 atgcggaggt gctggagccc caacttcccg aaccggatat gccggtcgga ttcgagttat
     4741 agaacaagga ttgatcgagc ctgggctgga tattgaaact atccagattg atgcccgggg
     4801 gtgcgtacaa ggggcgtgcc cgcgactgga cagtcacccc caattgctga tcgtaacccc
     4861 cgacgccgga cggaaagtag ctgtcgatgg actgggcatg gagcgccatc ggccacgccg
     4921 tcagcgcaag accggtcagc catggcaaaa gcgagcctcg gcggcgcgtt gaggattggc
     4981 gatttcggac aaacagcatc atgggcacac gtcaattcaa tatggcacaa tatcgacggc
     5041 tgtttcgaac gcaagctttc ttgatcttgg cgtgatcaac agtcttcaac ggagtgccag
     5101 atgccggctt cacggtcagc cggaagtcgc gatccggtcc ggctccgttc ggcttagggc
     5161 gatttccgtt cgcgctggct cgcggaaatc gcttcggtga ttccgtcttg ccgcgcaccg
     5221 ctcgggcctg ccccaagtgt ttcatcagcc ggggccacct ggcagcgcgg tgctgcgatg
     5281 gcctcgcgcc ggagctgccg ccagacctcg cgcacgccag agacctggaa attcgcattc
     5341 cagacccgcc tgatgtccgc ctgcaaggct gtatcgcgcc gctcccgcgc ggatcgcttg
     5401 gcgggatctg cgcgttttgc cgcgggcgca ttgtaggtgc tcggcgcgat cggcaaagcc
     5461 ggcagatcgg ctcgaccctg caagcaccgc gatggtcatc gataaacgcg atcatggttt
     5521 ggacctggcg tcgaactccg ccatcgcaaa atacgccgac gccttgcgca ggatcttgtt
     5581 agcctggcgc aactcgcggt tctctcgttc cagcgctttg ataagctccc gctcctcgcc
     5641 agtcggaccg gccctaagcc ctgatcgcgc tccacctgac gcacccagcc acgaagcgtc
     5701 tcccccgtgc agccaatctt ggcagcaatc gagccgatcg ccgcacattg agaggaggga
     5761 tccgccccgt gctccaccac cattcgaacc gcacgcgaac gaacctccgc cgactaccgg
     5821 ttcgtcgatt ttgacttttc catcgttgca gcatctcaag gtttggagcc tccgaaaaac
     5881 ccggcgcggt ccagttgtgg cgtcgcggtc gagacctgat tacccgctga acagttcggg
     5941 tcgttcgttg agcagggctt tcaactccgc atactgcggc tcaaaggaga agtggccggc
     6001 cagtacggcg gtcgtcacga ccgcgggccg ggacaattca accgcacgcg cgcatatata
     6061 ggcctcgtcg cctccaagtg tgctgaggcc ggcaagcagt cgatggcgat gcaccagaaa
     6121 gtagcccatc tgttcccaga accgccgctc gaacgtgatc acaccgatgc tgaactggat
     6181 cggacaaaga aggacacgcc gttccaacga atgcaggcgc gcagcggttg ctgccagtgg
     6241 cgccgtccgt tcccatatcc atcgcgccgc ggcaggatcg gtgtggatgg cgagaccaga
     6301 tgttgcgagc tgcgcccgac cgaacacggc ctcgtagtca tcgagcaggc ccagcatttc
     6361 gagcagataa cggtaacaga atccattcag cgggatcatt ggtgcgacga agctgggatc
     6421 cacaacacct tcggccttga tatcacggta ctcggccagc aacccggtga ttgtatccgg
     6481 caacaggaac atgtcttcgt ccaacttgac gatcatctgt gcgcgatcat gcagccgata
     6541 gcagacgttt tgcgccagcg cgacgtcatt ggttgccgtg cctagataac tccattcttc
     6601 acggcggcac aggtcggcga gatcgtcgcg gcgcaaacca ggtgaaacga tgcatacgtc
     6661 ggcttccggc aacgcggcgc ggaagcgcgg catgacgaag cgccagagtt cgggttcgta
     6721 accagcgagc atgcagacca gggtagccgc gccgttccgg cggtcatcga acacgacgcg
     6781 gtcgtgaagc cttgaataga caccgcctgc gtccaatccg ctcttcatca tgcggtagac
     6841 agcacggatg tgcgcacctt tctgacagat cgagcccgcc tcggcggtaa ggtactttcc
     6901 cgcagtacgg agttccaggt cgaaccccgg aggcttccgg tttgtctcat gccgctcacg
     6961 atcagaggtc ctttaagaat tgtctcggaa ttccccgatt agtcgggcaa gcggcgccag
     7021 tcctaccaat catccaaatt gaccgccgga aagcggtgat tgcactagaa aaccccccgg
     7081 atcattggtg tgcacgcgtg catggttgcc tgctgatcgc cagcaagcaa tcgtctctca
     7141 tccggcatga tcggcgcaac aagggaactg gttgagtcgc ggcatccctt tgtacgaggg
     7201 gtcagtcttt ttggttatgg acggcgcggg tcccttcatc ccactttggg gagacgcttc
     7261 agagccggtc attgatcgcg cacaccctaa cggccttggt atgcttggac ccgacctgaa
     7321 tcagacttcc ggaagaacat tccacttaag ggcttctatc tacagatcga ggatgaccct
     7381 tttcatgccg gttcggcgac ctggcttgcc cggtcctata ttcaaagcct gaccggagcg
     7441 gtgtgcatgg cggtacgacg agcggaatcg ctcttctcta atctttgcta tctgggcgcg
     7501 gcccgagccg gggccgtgtg catgaacctg attgcgacaa gccgcctggc ccatgcgctg
     7561 ggggctcaga atttcggcgt caacagtttc gcggcctcct acgtctcgta ttttctcatc
     7621 gtggtgaatt ggggctttga cacgttcctg acgcgagaga tcgcagccga cggatcgcgg
     7681 ctgcgatcgc tcgtcagcag tgtcatcggc atgcgcctgc tgctcgcagc agcgatgacc
     7741 atcctgctgt ttggcagcat gaccctgctg catgtcagcg agatggcgcg cgtggtggtg
     7801 ctgatccaag gcgccaacct tttcggctcg gcgatcgggc tgacctgcgt ctaccaggga
     7861 ttgcaacgca tgcgactggt cgcctggcga gagatcgcgg ccagcgttat caatgccgcc
     7921 ggaatacttt ggctggtcca cagtcccgac gatctcgtgt tcgcggcctg tatcgcggtt
     7981 ggcacgcaga tgatgaccaa tctggcgctg ctgacgcact atgcgaccga attcggcatt
     8041 ccgcggatcc ggctgccggg acgggccgaa tttgaggtca tccggaattc gatgtcgttt
     8101 ttctggtcgt tgctgatgat aaccatcacc tacaacacgc acatcgtgat gcttggcctg
     8161 actcgcagcg cgaccgatgt cggtcttttc agcgccggtt ggaagctgtt catcctggct
     8221 atcgccgtcc ccaatctgat cgcaacgctg ttcctgccgc gtatcgccaa tttgacgacg
     8281 caagtcgcgg aacgggagcg gtcgatggag ctgttcctga aggggatcat cgtctgcacg
     8341 atccccacca ccgttttcgg gtgcctgctg gcgccacaca tcctgactct tctttttgga
     8401 cccgcttatc tgccggcgtc gcaaactgtt atcgtgctgc tgctgaatgc tttggtcgtc
     8461 gccttgaata tcggcttcgg gacgtcgatg ctggcgatag gtcggcagaa tgcgttcctt
     8521 cgggtgatgg ccattggcgc cgggacgggc attctgctca atctcattct gataccttat
     8581 tgtgggggcg agggtgccgc cttggccacc ttggtggacg agaccgtgat attgagcatg
     8641 ctgttgcgaa aatgtccgga aatgcccgga ccacctatca tcgatttcac catacgttgt
     8701 gccatcgcga tcatcccggc ggccggtgcc gtccagttgt tcccgtctct gccgctggtg
     8761 tcggaatccg ccctttggac ggtgataggc ggcggcactg tgggcggcat cgtctatgtg
     8821 ctggtcctgc gcctgctgcg tattgacctg atgcacttcg ccgcggattt gcgccgcctg
     8881 caatagcccg gatcggcccg ccgggtcgcg tcgtgcggtt tgctctagca gcgcgcgcca
     8941 gagaagcgcg atacgtcgca ggtttgcttg cgtgaccgat tcacgcggga aatcgcggtc
     9001 actgcgtgag tcgcgctttc ccgcgatcgg gcactagccc gttcggctta actgcgctga
     9061 tcggctaccc cgaaaaggca gtattcgcgg cagtcacatt tgcttgctag ggcgagagcc
     9121 gaacgcgcat gatgaccacc aatcgacgga atggtagccg atcgttccgg tgtttccggt
     9181 cgcaaggctc gtgaccagtc atctttggaa gcttccccat catgcacttg tccgacagcg
     9241 atatcctcaa gcggctgact ccgatcttcc gcaacgtttt cgacgaccag tcgctcgatc
     9301 cgacgcccga aatgacggcc gacggcatag ccgggtggga ttccatgtcc caggtcacgc
     9361 tggccgtcga agtcgagcat gactttggtg tcaagttccg ctcggcggaa atggaagaac
     9421 taagcagcgt gcgtgagctt attgaactga tcaaaagtcg tgcagtctcg acgactgcct
     9481 agcgacgcgc cgaggcacga tgctattcaa ttcctataca tttatctttg cctttctacc
     9541 tgtcgcactg gcgggctttc atcttgccag ccgtttcggc cggcggccgg cggctgcctg
     9601 gcttatcctg acatccttcg tgttctatgg ctggtggagc ccgacctttg ttctgttgct
     9661 gatcgcctcg acgctgttca actacggggc gtcagaggcc gtggccgcgt tcgagtcccg
     9721 gccacgcttg cgaacgactt gcctgtgcct ggcgattacg gtcaatcttc tcgtgctctg
     9781 ctactacaaa tacctcacga cggttctgca tgccctgacg aatcttgggc tgctcgacga
     9841 ccccgtctcc gcgatcgttc tgccgcttgg tatttccttc ttcaccttca cgcagatagg
     9901 ctatctcatc gatcgcaacc agggcctcgt gaaagaaagc gggtttctga actatttgct
     9961 tttcgtcacc ttctttccgc atctgatcgc cggcccgatc ctgcatcatc gcgagatcat
    10021 gccgcaattc gcagacggca ggagctaccg tttttcctac gaaaacatcg cggccggcat
    10081 gacgatcttc atcatgggcc tggtcaagaa atgcctgctc gccgacccgc tttcagccac
    10141 tgtcatcgcc ggcctcggca acatccacca cctgtcgatg ctcagcgcgt ggaacgttgc
    10201 cctgtcttat tctctacagc tctatttcga cttttccggt tattcggaca tggcgatcgg
    10261 cctggcccgc atgttcaata tccacttccc gctgaacttc aactcaccct acaaggcggc
    10321 gtcgatcatc gatcactggc agcgctggca tatgaccttg tcgcgctatc tgagactata
    10381 cctgtacaat ccgatctcgc tggccgtgac gcgctggcgc gttgcgcatg ggcttggcat
    10441 tacgcgcaac gcgcaggcaa cattcggcgg tttcgttacc atgatgctgg tgccgacgct
    10501 gattaccatg ttgcttgccg ggatctggca cggtgccggt ttgcaattcg tcatcttcgg
    10561 cctgctgcat ggcacctacc tgaccatcaa ccatgctttc aggatatttc gcagcggcaa
    10621 gccccgcccg gcccatctgc agccggttat gctgcgctgc agcaacattc tgctgacgta
    10681 tttggcggcg cttgtcgcct cgatcttctt ccgcgctgct tcggtcggat ccggcttcag
    10741 tctgctcggc ggcatgatcg ggctgcatgg cgccggcagc attgcactgc cgatggtcct
    10801 gcttgcgaag ctcggcggca tggggcagtc gctgatgggt agtggcttcg tgtctgtcgt
    10861 ctcgatcctc gattggaccg ccggggtcgc gcatttcggt tggcttatcg tattatacgc
    10921 gatcgtctgg ggcatgccga atacccagca gatcatgcgg aattatatcg agccgtcgct
    10981 gggccgcgtc actgccggac ccctgccaca attcgcgtgg cgtcccaatc gcggatgggc
    11041 cgtggtggtt ggggcactga cctcgatcgg gatcctcgcg atcggcggga cgaccgaatt
    11101 cctctacttt cagttctgag cgtggcatga gcgaattgca ggcacctgac gtcagcctct
    11161 tcgccaggga gcaggtgtcc cggcacccgt ccggcaaagc gttccgacat cgggacgttg
    11221 acgaagcgac ccgcgcatca cgcagcgccc gcggctttgt cgcctgggtc ctgatcagtt
    11281 tcctggcgtc cttcggcctt gtctggatct acgtatggac gatgccgatg gcctttctcg
    11341 atcgagacta tccggtatgg atcgcgaagc gcgccatgct cgatacatgc cgtctcggca
    11401 ccgtttcggt attcggggac agccgcacca tggcggcggt gaagccggat gcgatgccgc
    11461 tgccggttac caatttcgcg ctttccggca caagcccgct ggaaacctac ttcgccgtcc
    11521 aacgggcgct gcgttgcccg acaccgccaa agctcgtcgt catcgcgcat ggtgcgttga
    11581 aattcgcgtt ggattccgat tattgggttt tcagcgcccg agcggggttt ctggattatg
    11641 ctgagatgcg atcggtggag gcggaggcgg cacggctgca tgaccacgaa ctggaggatc
    11701 tgcggagggg tgatgagttc ggtccggccg tgcgtgagcg tctgtttgcc ctgcgctatc
    11761 cgccattcta tttcgacagc ctggtcaacg gcttcctgtt cgcccgctgg ttcaacaatc
    11821 gccacgcaat ggcggaggcc ttgcggacgt ctggacatat gacgttcggc gcggcgtcgg
    11881 gcgacagcgg cgtggcgggc gaggggggct ctcgcgcctt ccagccatcg ccgcttgtcg
    11941 atttttactt cgacaagacg ctcgctcttc tggcggcgca tcatgtcccg gtcgttttcc
    12001 tctccatgcc ggtcaatcag gcaaccttcg acgacatgac gccgcaactg cagcagaaat
    12061 tcgacgccta tctccgaacg aaggcagatc agtttcccgg cctgcgcgtc gtcggcccgc
    12121 cgattccgtg ctggcccaac cgtttctatg gcgattcctg gcatttcaat gaaaccggcg
    12181 cgaccgcctt cagccgggaa cttggaccct ggcttcaggc cgtgctggcc gacggacccg
    12241 cccagcctct gccaaaccac tgcgatacaa cggaaaacct cgccaaccgg ggctgacgac
    12301 atcagccaaa agtataatga tgaaagcatc atcatccgaa tggcgagcct gacaaaagcg
    12361 ctcttggtac gtcactttac ttgtctcggt catgttaccg atagccgatt tcagtatttg
    12421 tttctggaac aggggaggaa taacattgat cgctccatcc accattgaac cgcatgatat
    12481 ttcattgacg cacggcaacg cggcggtcca gccggtcacg ttcggcggct gcttcggctg
    12541 gctgcacagc gcgtcggggt ctggtgttcg ggatatcggc gtcgtgctgt gccagggggt
    12601 cggacgcgat gccagcaacg cgcatcggtc gttccgcatt ctggccgatc gcctggcggc
    12661 cgccggctat gccacgctgc gattcgatta tcccggaaca ggggattccg atgaaccggt
    12721 ggtggagttg tgggacgcct ggcagaacag tctcaccgat gcagtcgcct gcctgcgtgc
    12781 ccggaccggg gtttcccgcc tcgtcttcat cgggctgcgg gcgggcgcga tcgtcgccac
    12841 gaccgtcgcg gcgatacggt ccgatgccgt ggggctcgtg ctgctggagc cgacgctgcg
    12901 cggcaagtcc tacatgacac aactggcggt cgaagcgcgc ctgcgtgccc gcgatgcgcg
    12961 tcgagatgcg cccgggatcg aaatcgatgg gttgcacctt ggcccgtcca ccatcgaacg
    13021 gttgtcggcg atcgacctgc ggcagacggt attcgggcct ggtttcgctg tcgcggcctt
    13081 cacccaggcg ccttcgtcgc tgctttcggc ctgtgccgcg gcgtggcagg cacagggcgc
    13141 cgcggtcgcc atccatggct tcgacgggct gggtggcctg ctgcggccta gccacctcgc
    13201 cgacgagccg ctggtcgacg tgacccccat cgttgcttgg ctggaggggg cgatccccac
    13261 gacacgcgtc ccgcttccca tcattgcgcc atcgccggcg acgctcaggc ccacgggctg
    13321 tgtggagacg gcgattcgct ttgggacgga aaatacactg ttcgggatac tctgccgatc
    13381 ggggtcccat gcgccggtgg aatccgctgt tgtcatctgc aataccggcg gcgatccgca
    13441 tcacggcttt gcccgcttct cggtgcggct ggcgcggcgg ctggcgtccg agggcgttgc
    13501 ttcgcttcgg ctggatttcg ccggcatggg ggattctcca agccgcacgg ccgagggcga
    13561 cgaagatgtc acccatgtct ttagcgtcga tcgacgggcc gatatcgccg cggcggtcac
    13621 cgcgctgcag gccgccggct accgccgttt cgcggtgaat gggttatgtt cgggggccta
    13681 tcacgccttt caggcggccg tttcggatga acggatcgat gcccagcttc tggtcaacct
    13741 gccctggttc agtcttcgct atgaccggcc cggcccggcc agcgtggcgc gaaacgccat
    13801 gcgtacgctg tcgcaacgcc aggtcagcag cctcatgctt ttcgcggaac gcgatgcggg
    13861 actgactgcg ttgaacacgc atttcggcga gggcggcgcc gacttgccgg cgttcccggg
    13921 cgccacggcg gccacgttgg cggacgtgga ccacgacctg accacgcacg cgatgcagga
    13981 tgtggtgacg ctccgcatga tcgcattcct gcgtgatctc ggctggattc ccgcgatcgc
    14041 aacgtcaaga ccggcgatgg ctgcctgcta ccccgtcgca ttaacggccg cgggcaaaga
    14101 acaatcggtc gaaagcgatc aagtcctggc ctggtagagg agcagccacc cgatgtccat
    14161 ccgatccgtg atcatggaac aagtcaccaa ggtagccgaa cagcagcgcc agccgctcgc
    14221 accgctgcac gattcgctgc cacttctaaa gtcaggcctg gattcgctgt cgatcgccat
    14281 catcgtcgct tcgctggatg acgagctggg cctggatccg ctgtccgcca gcgatgatgt
    14341 cgagtttccg gtgacccttg gtgcgttcat ccggctttac gaaaatgctg ccgcgtagcc
    14401 ggctttcgct ttgggatctc gttgcgcccc aggaagcgtc gccgacgcgc ttcctggccg
    14461 atcccgctga ccgcctcgcg ctgcgtgacc tcgccggcac atcgctgttc ggcgaaaggc
    14521 gggagacgct gcgcggccgg tcggtgatga tttcgaccga acggcaattc attgcggcac
    14581 tgatgttgat cgagctggac ggcatcgcca gccgactggt catctgcacg cccgatcttt
    14641 cgccggatca tgtaaaggcg gcgatcgcgg atgcggaggt cgaggtcgtg gtctccgacg
    14701 gcggcggacc cgctgccggc cttgacgttt ccgtcgaaac gatcgtcggc ggcgggcaga
    14761 tgcacgacat cgccggctgc gcggcacgtg atgtcgagac ggaatgggcg ctgttcacct
    14821 ccggcaccac ggggcggccc aagatcgtgc tgcacagcct ggccggactg accgggccac
    14881 agaaagacaa ggggaccgcc agaggcgatg tcgtctggag caccttctat gatatccgcc
    14941 gttatggcgg tctgcagatc ttcctgcggg cgatggccgg cggcggatcg ctggttcttt
    15001 cggatgcgca cgagacgccg ggtgccttcc tggcgcgggc cggtgccaac ggcgtcaagc
    15061 agatttccgg caccccctcg cattggcggc gtgccttgat gagcggcgcg ttagccagcc
    15121 tgaagccgga ttacgtgcgc ctgtcgggcg agaccgccga ccagacgatt cttgacgctc
    15181 tccagcgaag ctttcccgat gtcccggtcg ttcacgcctt cgcctccacc gaggcgggcg
    15241 tcggcttcga ggtgcgtgac ggggtcgccg gctttcccgt ctcggtcctg gatagccagg
    15301 cgggggtgga gatgcgggtg ctggatggtt ccctccgcat ccgttcatcg cgcaccgcga
    15361 cgcgctatgt tggtgccaac gcggcgttga cggatgccga gggcttcgtc gacaccggcg
    15421 atcttctgga gcggcgtggc gaccgatatt acttcgccgg ccgccgcgaa ggtgtcatca
    15481 atgtcggcgg tgccaaggtg catccggaga cggtggaggc ggtcatcaac cggcatcccg
    15541 ccgtcagcat gtcgcgggtt tcggcgcgca agagtccgat caccggcgcg a
//
LOCUS       DATAVD010001528         1645 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_330742, whole genome shotgun sequence.
ACCESSION   DATAVD010001528 DATAVD010000000
VERSION     DATAVD010001528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_330742"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            4..174
                     /locus_tag="VHX39_29380"
     CDS             4..174
                     /locus_tag="VHX39_29380"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX3995306.1"
                     /translation="MARGLTGVAEGVENQEMWDRLRALGVQEAQGFFIARPLPAAAVS
                     VWLEAWRAKRDA"
     gene            complement(182..1105)
                     /locus_tag="VHX39_29385"
     CDS             complement(182..1105)
                     /locus_tag="VHX39_29385"
                     /inference="COORDINATES: protein motif:HMM:NF013292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase"
                     /protein_id="HEX3995307.1"
                     /translation="MILVTNNEGSVGVPTTVRLLADGAPALDAIEAGIRLIEADPNVR
                     TVGRGGWPNLLGDVELDACLMDGTTLRTGAVGALRGYLHPVSVAREVMRRLPHELLVG
                     EGAARFAHEIAAPTADNLIDDSRRVWQAWFDRTLTSAQRQAWPDIPLAELCRHAIDPE
                     TGRDTTVFLAHDAGNNICSGTSTSGWGWKYPGRLGDSPIIGAGSYADTRYGAAACTGA
                     GEMTIRCCTARSVVLYMKRGATVADAVLEAVEDMRALQTGLINRVTIHAIDPGGDHKV
                     VAVNGTGGNVYWLWEGSGEPVQRPAEAIPLR"
     gene            1317..>1645
                     /locus_tag="VHX39_29390"
     CDS             1317..>1645
                     /locus_tag="VHX39_29390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995308.1"
                     /translation="MSDRAQPVPTRPQEAYDFEPAFRLDLEQQSKRAKELRRAFLAGD
                     AAAVQRFRRHHPALWNGGDTPLRPVKLSDAQFVIAREIGLPSWPKLKAHILAMRGMRD
                     RIAHGTSA"
BASE COUNT          285 a          519 c          545 g          296 t
ORIGIN      
        1 gcgatggcgc gtggtctgac cggggtcgcc gagggcgtcg aaaaccagga gatgtgggac
       61 aggttgcgcg ctcttggcgt gcaggaagcg cagggcttct ttattgcacg tccgctgccc
      121 gctgctgccg tatcggtctg gcttgaggcc tggcgcgcaa aacgggacgc ctgatccgcc
      181 tttaccgcaa cggaattgcc tcggccggcc gttgcacggg ctcgcccgat ccttcccata
      241 gccaatagac attgccaccc gtgccgttca ccgcaacgac cttgtgatcg ccgcctggat
      301 cgatggcatg gatggtgacg cggttgatca ggccggtttg cagcgcacgc atgtcctcca
      361 ccgcttccag cacggcgtcg gcgaccgtgg caccacgttt catataaaga acgaccgagc
      421 gggcggtaca gcaacgaatg gtcatctcgc cggcgccggt gcaggccgca gcgccatacc
      481 gcgtgtcggc ataggaaccg gcgccgataa tcgggctgtc gcccagtcgg ccgggatatt
      541 tccagcccca gccggatgtg ctggtaccgg aacagatatt gttgccggca tcgtgcgcca
      601 ggaagacggt ggtgtcgcgg ccggtttccg gatcgatggc gtgacggcac agttctgcca
      661 gcggaatgtc cggccacgcc tggcgctgcg ccgacgtcag agtgcgatcg aaccatgcct
      721 gccagacacg acgggaatca tcgatcaggt tgtcggcggt cggtgcggcg atttcgtgag
      781 cgaaccgggc ggcgccctcg ccgaccagaa gttcgtgcgg caggcggcgc atgacttcgc
      841 gggcgacgct gaccgggtgg agatagcctc gcaatgcgcc gacggcgccg gtgcgcagtg
      901 tcgtgccgtc catcaggcag gcgtcaagtt ccacgtcgcc gagcaggttg ggccagccgc
      961 cgcggccaac ggtacgaacg ttcgggtcgg cctcgatcag gcgaataccg gcctcgatcg
     1021 catccagcgc aggggcgcca tccgccagca aacggaccgt ggtgggaacg ccgacactgc
     1081 cttcgttgtt ggtaaccagg atcatgtggc aactccggtt gcgagggtcc gatgttctta
     1141 gcggattgcg agccggttga cgctctgcct tattgctcct atttcgatcg cggctcggtc
     1201 ggagcctccg tgtccgcgga aagggcagcg cccgcgactg actttttttg cgacaatcag
     1261 gctcatccct tttctgtctg gcaggcggac acggacgttg gagaagggat ttcgccatga
     1321 gcgaccgtgc ccaaccggtg ccgacgcgcc ctcaggaagc atacgacttc gagccggctt
     1381 tccgcctcga cctggaacag cagagcaaac gtgccaagga gttgcgccgg gcgttcctcg
     1441 ccggcgatgc ggcagcggtg caacgctttc gccgccatca cccggcactt tggaacggcg
     1501 gcgacacgcc gttgcggccc gttaaactaa gcgacgcaca atttgtgatc gcgcgcgaaa
     1561 tcggcctgcc cagttggccg aaattgaagg cacatatcct ggccatgcgt gggatgcgag
     1621 accgcatcgc gcacgggacc tccgc
//
LOCUS       DATAVD010001529         6779 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2193032, whole genome shotgun sequence.
ACCESSION   DATAVD010001529 DATAVD010000000
VERSION     DATAVD010001529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6779
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2193032"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..903
                     /locus_tag="VHX39_29395"
     CDS             <1..903
                     /locus_tag="VHX39_29395"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HEX3995309.1"
                     /translation="EYSQDGALHQAKAKKEVLLCGGSINSPQILQLSGIGPGGFLQSL
                     GIEVKHDLPGVGENLQDHIGGRVIHRCIDGTVTMNEIYHNWLRRLYAGAEWIFARKGP
                     LMTGAAPIGLFVKTRPELDSPDVQYQFLAGSAEKTGEPMHRFPGCTLVAIPCRPESRG
                     WLRIQSTDPRKPPAMQPNYLSTQADRDTIVAALRVSRKVFASASMQRLCKEEIYPGPK
                     AQSDEDLLNHVRATAGTTFHQTSTCMMGPGPKAVVGTDLKVKGLDGLRVIDASVMPTV
                     VSGNTNATVIMIAEKGADMILKAA"
     gene            909..1661
                     /locus_tag="VHX39_29400"
     CDS             909..1661
                     /locus_tag="VHX39_29400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3995310.1"
                     /translation="MEQTFAGKVALVTGAGKNIGRTIALDLAARGASLVINGRADRTA
                     VDGVVAEINAAGGQAIGCLADVADPVTTGAMIDAAVAAFGGIDILVSNAGLRRQTPFL
                     EMSLAEWREILSVALDGAFILARAAAPHMLGRGGGAIVALSGISTHVGTPNRCHVSAS
                     KAGLEGLMRALAVELAPHGITCNTVAPGAVDTVRGASAGALPKTLTDGGIPLGRKAAV
                     EEISAAVRFLAGPDGRYITGQTLHVNGGAYLT"
     gene            1904..3481
                     /gene="guaA"
                     /locus_tag="VHX39_29405"
     CDS             1904..3481
                     /gene="guaA"
                     /locus_tag="VHX39_29405"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEX3995311.1"
                     /translation="MTDSLPDPADTPERILILDFGSQVTQLIARRLRESGIYCEIWPF
                     NADAARIATWNPRGIILSGGPASVHEEVAPLAPSAVFGMGIPVLGICYGEQLLCQQLG
                     GTVEPSDHREFGRAYVDVADDCALFHGVWAKGSREQVWMSHGDRVTRLPPGFRVVATS
                     EGAPFAAIADDTRRFYGVQFHPEVMHTPHGAQLLRNFTHTVVGLSGTWTMAGFRAAEI
                     ARIRAQVGAGRVICGLSGGVDSSVAAVLIHEAIGEQLTCIFVDHGLLRHNEAEEVVTT
                     FRDRFNIKLLHRDASDLFLGALDGVTDPETKRKTIGRLFIEVFEEEAARIGGADFLAQ
                     GTLYPDVIESVSFTGGPSVTIKSHHNVGGLPERMRMKLVEPLRELFKDEVRVLGRELG
                     MPEAIVGRHPFPGPGLAIRIPGAITREKADLLRKVDAIYLEEIRSAGLYDAIWQAFAV
                     LLPVRTVGVMGDGRTYDMACALRAVTSTDGMTADVYPFEMAFLTRVAGRIVNEVRGVN
                     RVTYDITSKPPGTIEWE"
     gene            complement(3722..4489)
                     /locus_tag="VHX39_29410"
     CDS             complement(3722..4489)
                     /locus_tag="VHX39_29410"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3995312.1"
                     /translation="MGRLDGKIAAVTGGASGIGEATVRRFVAEGASVAFCDRDGERGR
                     RIATELEAAGAKVAFTQVDVGTEAACLGFVNGAAQTFGRLDILVNNAGIRKYEKVDEA
                     SAESWNEILDVNLKSFAFCAKAAVPLMRRNKGGAIVNLASVRSVVAGGGNLLYDTTKA
                     AIAGFTRGLAADHSAEGIRVNAVGPGPIFTPFHARRIAAAGETIEQYNAKAAQGTMMK
                     RPGRAEEVAAAILFLASDDASYITGALLFVDGGMTAM"
     gene            4699..5091
                     /locus_tag="VHX39_29415"
     CDS             4699..5091
                     /locus_tag="VHX39_29415"
                     /inference="COORDINATES: protein motif:HMM:NF040323.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase superfamily protein"
                     /protein_id="HEX3995313.1"
                     /translation="MEATITFGQVIPILRIFDIAKADEFYLDYLGFHVDWDHRFDDSA
                     PLYRQVSRGALILHLSEHHGDGSPGARLRVTMRGVRTFHEELIAKNYRYMRPGLEATP
                     RNTLETGVIDPFGNLIRFSESIDVRTAE"
     gene            5072..5266
                     /locus_tag="VHX39_29420"
     CDS             5072..5266
                     /locus_tag="VHX39_29420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995314.1"
                     /translation="MFGQQNDRFKPDLDLIAAWGPEQVIVDEAQRVQNLKMPLPSPET
                     ARQLANAPSALADTLRGRIA"
     gene            5378..6133
                     /locus_tag="VHX39_29425"
     CDS             5378..6133
                     /locus_tag="VHX39_29425"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3995315.1"
                     /translation="MRGLSGRSVLLTGGGSGIGRATAIRLVEEGCRVGILDIDEAGTE
                     ETIRRCGGKAWARRTDITDRANVEAAVAAFEQEVGPVDLLANIAGWDIMRNFLDTDVA
                     LWDRIIGINLYGPLHLHHVVLPGMVRRGFGRVVNVASDAGRVGSSGEAVYSACKGGII
                     AFTKTMAREVARKGVTLNVLCPGPTDTPLFDGFKAASPDGQKVADAMARAVPLKRIGQ
                     PEDYPGTIAFLLSDDAAFITGQTISVSGGLTMS"
     gene            6204..6689
                     /locus_tag="VHX39_29430"
     CDS             6204..6689
                     /locus_tag="VHX39_29430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HEX3995316.1"
                     /translation="MTEIDGYEVLGLGLYFDDLPVGRKFRTIGRTLTEADLVNFIGVT
                     GMTEVLFSNTEFLKHESDINQRVVPGAMVYSFAEGLLVHATMQHTGFAFLNMELDVKG
                     PTFAGDTIHVECEVVESRRSTSRPNRGLVRTFNRVVKQDGTTVITYNPLRMVKARSTG
                     A"
BASE COUNT         1255 a         2205 c         2130 g         1189 t
ORIGIN      
        1 gagtacagcc aggatggcgc gctgcatcag gccaaggcga agaaggaggt actgctgtgt
       61 ggcgggtcca tcaactcgcc gcagatcttg cagctatcgg gcatcgggcc gggcggattc
      121 ctgcaatcgc tgggcatcga ggtgaaacac gacctgcccg gcgtcggcga gaacctgcag
      181 gaccatatcg gcggccgtgt cattcaccgt tgcatcgacg gcacggtgac gatgaacgaa
      241 atctaccata actggctgcg ccggctgtac gcgggtgccg agtggatttt cgcgcgaaag
      301 ggcccgctga tgaccggcgc cgccccgatc gggctgttcg tgaagacccg cccggaactg
      361 gacagccccg acgtgcaata ccagttcctc gccggcagcg ccgagaaaac cggggagccc
      421 atgcaccgtt ttcccggctg caccctggtc gcgatccctt gccgcccgga aagccgcggc
      481 tggctgcgca tccagtcgac cgacccgcgc aaaccgccgg cgatgcaacc aaactacctg
      541 tccacccagg cggatcggga cacgatcgtc gccgccctgc gggtctcccg aaaggtgttt
      601 gcctcggcca gcatgcagcg tctctgcaag gaagagatct accccggtcc caaggcgcag
      661 tccgatgagg acctgctgaa ccatgtccga gccactgccg gtacgacatt tcaccagacc
      721 agcacctgca tgatggggcc gggaccgaag gccgtggtag ggacggacct gaaagtaaaa
      781 ggattggacg ggctgcgggt gatcgacgcg tccgtcatgc cgacggtggt gtcaggcaac
      841 accaacgcca cggtcatcat gatcgcggag aagggggcgg acatgatcct gaaggcagcg
      901 tgatcccggt ggaacagaca ttcgccggca aagtcgccct ggtcaccggg gccggcaaga
      961 atatcggccg caccatcgcg ctggatctcg ccgcgcgtgg cgcctcgctg gtgatcaacg
     1021 ggcgtgccga ccgaaccgcg gtcgatggcg tggtggcgga gatcaacgcg gcgggcggcc
     1081 aggcgatcgg ctgcctggcg gacgtagccg atccggtgac gactggggcc atgatcgacg
     1141 cggccgtggc ggcgttcggt ggcatagata tcctggtcag caacgccggt ttgcgccgcc
     1201 agaccccgtt cctggagatg tcgctggccg agtggcgcga aatcctctcc gtcgcactgg
     1261 atggcgcctt cattctggcc cgcgccgcgg cgccccacat gctgggccga ggcggcggtg
     1321 cgattgtcgc gctgtcgggg atttccaccc atgtcgggac accgaaccgc tgccatgtct
     1381 cggcgtcgaa ggcggggttg gaggggttga tgcgtgcact ggcggtcgag ttggcgccgc
     1441 acggcatcac ctgcaacacg gttgctccag gcgctgtaga tacggtgcga ggagcatccg
     1501 ccggtgccct gcccaaaacc ttgacggacg gcggcattcc gctcggacgc aaggccgcgg
     1561 tggaggagat ttccgccgcc gtgcgcttcc tcgccggccc ggacggccgc tacatcaccg
     1621 gccagaccct gcatgtgaat gggggggcct atctaacctg aatgggttcc aagtgcctcg
     1681 gcccatcgtg cgcatgcacg ggtcgatcgt gcgtatgcac gggtcgatcg tgcgcatgca
     1741 cgggtcgatc gtgcgcgtgc acgggtcgat cgcgcgcatg cacgggtcgc atgacgcggg
     1801 tccaggctta tcccgctcag acgagggccg tgccctggcc tgacttgctt taacgcggct
     1861 ggcatggtcc aaggcgcggg atcaagcatt gaagacccat cccatgaccg actccctgcc
     1921 tgatcccgcc gacacgcccg agcgcatcct gatcctggac ttcggcagcc aggtcaccca
     1981 actgatcgcc cgccgcctgc gcgaatcagg catctactgc gaaatctggc cgttcaacgc
     2041 cgacgccgcc cgcatcgcca cgtggaaccc acgcggcatc atcctgtccg gcggccccgc
     2101 atcggtgcat gaggaggtcg cccccttggc cccctcggca gtgttcggga tgggcattcc
     2161 cgtcctgggc atctgctacg gcgaacagct tctgtgtcag caactcggcg gcacagtgga
     2221 accatcagac catcgggagt tcggccgcgc ctacgtcgat gtcgccgacg attgcgctct
     2281 gttccacggc gtgtgggcca aaggcagccg cgaacaggtg tggatgagcc atggcgaccg
     2341 cgtcacccgg ttgccgccgg gcttccgcgt cgtcgccacc agcgaaggtg cgcccttcgc
     2401 cgccatcgcc gacgacaccc gccgcttcta cggcgtgcag ttccatcccg aggtgatgca
     2461 cacgccccac ggcgctcaat tgctgcgcaa cttcacccac accgtcgtcg gcctgtccgg
     2521 gacatggacc atggccggat tccgcgcggc cgagatcgcc cgaattcgcg cccaggtcgg
     2581 tgccggccgg gtgatctgcg gcctgtcggg tggggtggac tcctcggtcg cggcggtgct
     2641 gatccatgaa gcgatcggcg agcaactgac ctgcatcttc gtcgaccacg gcctgctgcg
     2701 ccacaacgaa gcggaagagg tcgtgacgac attccgcgat cgtttcaaca tcaagctgct
     2761 gcatcgcgac gcctcggacc tgtttctggg cgcactggac ggcgtaactg accccgaaac
     2821 gaaacgcaag acgatcggcc gcctcttcat cgaggtcttc gaggaagagg ccgctcggat
     2881 tggcggcgcc gacttcctgg cacagggcac gctatatcct gatgtgatcg aaagcgtcag
     2941 cttcaccggt ggtccatccg ttacgataaa gtcacaccat aatgtcggtg gcttaccgga
     3001 acggatgcgc atgaagctgg tcgaaccgtt gcgcgaactg ttcaaggatg aggttcgggt
     3061 gctgggtcgc gaactcggta tgcccgaggc gatcgtcggg cgccatccgt tccccggccc
     3121 cggattggcc atccgcattc ctggcgccat cacgcgggag aaggccgacc tgttgcgcaa
     3181 ggtggacgcg atctacctgg aggaaattcg gtccgctggc ctctacgacg cgatctggca
     3241 ggcattcgcc gttctgctgc cggttcggac tgtcggcgtc atgggcgatg ggcgcaccta
     3301 cgacatggcc tgcgcgctgc gggcggtcac cagcaccgac ggcatgacgg cggatgtata
     3361 tccgttcgag atggcatttc tgacccgcgt cgccggccgg atcgtaaacg aggtgcgggg
     3421 ggtgaaccgg gtaacatacg acatcaccag caagcccccc ggaacaatcg agtgggaata
     3481 ataccagtcc ggtccgcatg aagaccgact ccctgccggc cgcccctcgt catgccgacc
     3541 gaggtcggca tccacgcctt ttgcctttcc aatcaaaggc atggaggcct tcgcccaccc
     3601 tgacgatgag aggccgcgtc actctttacg caggctgata caacaggtgc gacaaagcgc
     3661 cacaggacag cgtcgatgcc cggcgatcac ggcgacagga accgcgagcg ccggacattt
     3721 ctcacatcgc cgtcatgccg ccgtccacga atagcaaggc gcccgtaatg taggacgcat
     3781 cgtcggaggc caggaacagg atcgcggcgg cgacctcctc ggcccggccc ggacgcttca
     3841 tcatcgtgcc ctgtgcggcc ttggcgttat actgctcgat ggtctcgccg gccgccgcga
     3901 tccggcgcgc atggaacggc gtgaagatgg gaccagggcc cactgcgttc acccgaatac
     3961 cttccgccga gtggtcggca gccagccccc gcgtaaagcc cgcgatcgcc gccttggtag
     4021 tatcgtacag caggttgcca ccgcccgcga cgacggaccg tacagaggcg aggttgacga
     4081 tggcaccccc cttgttgcgg cgcatcagcg gaaccgccgc cttggcacag aacgcgaagc
     4141 tcttcaggtt gacatccagg atctcgttcc aactctccgc gctggcctcg tcaaccttct
     4201 cgtatttgcg aatgccggcg ttgttgacca ggatatcgag ccgcccgaac gtctgcgcgg
     4261 caccattgac aaagccgagg cacgccgcct cagtcccaac atcgacctgt gtgaaagcca
     4321 ccttcgcgcc ggccgcctca agctcggtcg caatgcgtcg gccgcgctcg ccgtcccgat
     4381 cgcagaacgc cacgctcgcg ccctcggcga caaaccgcct gaccgtcgcc tcgccaatcc
     4441 ctgatgcacc gcccgtcacc gctgcgatct tgccgtcgag ccttcccatg tctctcaccc
     4501 ttcttcgcat ttcgaatcgt gcattcgtcg tatccacccg gcgggcatcg tcttgctggc
     4561 ccaacctgcc tgtccgacct taacagattg cgggaaaact ccgaaatctc cagtgtttcc
     4621 cggccaggtt gatctgtaga agcatgcttg tggcgtgtcg ccatcgcggc gctgactgga
     4681 atgaaatttg gaggcgaaat ggaagcgacg atcacattcg ggcaggtgat ccccatcctt
     4741 cgcatcttcg acatcgcgaa ggccgacgag ttctatctgg actatctggg attccacgtg
     4801 gactgggatc atcggttcga tgacagtgca ccgctctacc gccaggtctc acgcggagct
     4861 ttgatcttgc atctcagcga acatcatggt gacggcagcc ccggcgcacg actgcgcgtg
     4921 acgatgcgcg gagtcaggac cttccacgaa gagcttatcg caaagaacta tcgttacatg
     4981 cggcccggcc tggaggcgac gccacggaac acactcgaga ccggtgtaat cgatcccttc
     5041 ggaaatttga tacgcttcag cgagtcaatc gatgttcgga cagcagaatg accgattcaa
     5101 gcccgatctc gacctgattg ccgcttgggg ccccgaacag gtgatcgtcg atgaagcgca
     5161 acgggtgcaa aacctcaaaa tgccgctccc gtcgccagaa accgcaaggc aacttgccaa
     5221 tgcgccttca gcgcttgcgg acaccttgcg gggcaggatc gcatgatgga ctgtcattgt
     5281 cctgtgaaca cggggcgacg cttctcccga acggcgcggt agccgttcca aataccaaac
     5341 gccaagatgg tctccggacc agggaaggaa atcgatgatg cggggacttt caggtcggag
     5401 cgtactcctg accggcggcg gcagcggcat tggccgtgca accgcgatcc gcctggtgga
     5461 agagggatgc cgcgtcggca ttctcgacat cgatgaggct ggcacggagg aaaccatccg
     5521 gcgctgcggc ggcaaggcgt gggcaaggcg caccgacatt accgaccggg ccaacgtgga
     5581 agccgccgtc gctgcgttcg agcaggaggt cggaccggtc gatctcctgg ccaacatcgc
     5641 cggctgggac atcatgcgga atttcctcga taccgacgtt gcgctgtggg atcgtatcat
     5701 cggcatcaat ctgtatggac cgctgcatct gcaccacgtc gtgctgcccg gcatggtgcg
     5761 ccgcggtttt ggccgggtgg tgaacgtggc ttcggacgcc gggcgcgtcg gatcgtcggg
     5821 tgaggcggtc tattccgcct gcaagggcgg catcatcgcc ttcaccaaga ccatggccag
     5881 ggaagtggcg cgcaagggcg tgacgttgaa cgtcctgtgc ccaggcccga ccgacacgcc
     5941 gctgttcgac gggttcaagg ccgcatcccc ggacggccag aaggtcgcag acgcaatggc
     6001 cagggccgtg ccgctgaagc ggatcggcca gccggaggat taccccggga ccatcgcctt
     6061 cctgctgtcc gacgacgcgg ctttcatcac cggccaaacc atcagtgtct ccggcggtct
     6121 gaccatgtcc tgatgcgctc attacgaaca ggcagcaatt tcatcgcccg caccgtgccg
     6181 ggcggcacca gaaggaaagc gtgatgacgg aaatcgatgg ctacgaagtc ctcggcctcg
     6241 gcctgtattt tgacgatctg ccggtcggcc ggaagttccg caccattggc cggaccctga
     6301 ccgaggccga tctggtcaac ttcatcgggg taaccggcat gaccgaagtg ctgttctcca
     6361 acaccgaatt cctgaagcac gagagcgaca tcaaccaacg cgtcgttccg ggggcgatgg
     6421 tgtattcgtt cgccgagggc ctgctggtgc atgccaccat gcagcacacc ggattcgcct
     6481 tcctgaatat ggaactggat gtgaaaggac ccacctttgc cggcgacacg atccatgtgg
     6541 aatgcgaggt cgtcgaaagc cgccgcagca ccagccgtcc gaaccgcggc ctggtccgga
     6601 ccttcaaccg cgtggtgaag caggatggca ccacggtgat cacctacaat ccgctgcgca
     6661 tggtgaaagc cagaagcacc ggcgcatgac gggatccctc gccggtggct tcgtcagaca
     6721 accgatccag gcgggaacga tggtttgcgc ttttccaggt gggacgccag accttcctt
//
LOCUS       DATAVD010001530         1562 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2007149, whole genome shotgun sequence.
ACCESSION   DATAVD010001530 DATAVD010000000
VERSION     DATAVD010001530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2007149"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1135)
                     /locus_tag="VHX39_29435"
     CDS             complement(<1..1135)
                     /locus_tag="VHX39_29435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHYT domain-containing protein"
                     /protein_id="HEX3995317.1"
                     /translation="MYTVLTVLLTRHDLRLVALAAFVCALSAFAGISLLTHARRTSGG
                     MQKVWLAIAAFAVGFGIWATHFVAVLAFSSGIPTGYDIPETLVSLGIAVSITGGGLGI
                     AAVGKRWTDALLGGAVVGVGISAMHYVGMAALLLGGRIAWSPPLVATSILFGIIFGAA
                     ALFLATWRPGFGWQIAGTGVLTLAICAMHFTAMGAADFSGCYAVIAPGNETPLWLSGV
                     VAVISTLIIGFALGGAFLDVRERERTLREADRMRGLADAAVEGLLVCADREIITANAS
                     FLALTWLEAVEGLEVTRFLSPATFSKIVLEPNEVVETELLTASGQHIPVEVILREVDF
                     AGRLRHAIAIRDLSARKQAEQHIRFLAHHDALTGLPNRASFNRQ"
     gene            complement(1274..>1562)
                     /locus_tag="VHX39_29440"
     CDS             complement(1274..>1562)
                     /locus_tag="VHX39_29440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HEX3995318.1"
                     /translation="FTELGDFLALPMRTYSAGMFARLAFAVSTAANNDILLIDEGIGA
                     GDTSFQKKARQRIEGLFHRTPIVILASHSESLVKEFCNRSVTMEHGRLVEA"
BASE COUNT          315 a          522 c          498 g          227 t
ORIGIN      
        1 gctggcggtt gaagctcgcc cgattgggca gcccggtcag tgcgtcatga tgggccagga
       61 accggatgtg ctgttcagcc tgcttgcggg cgctgagatc gcgaatggcg atggcgtggc
      121 gcagccggcc ggcgaaatcc acctcgcgca ggatgacctc gaccgggatg tgctgcccgg
      181 aagcggtcaa cagctcggtt tccaccacct cattgggctc gagcacgatt ttgctgaacg
      241 tcgccggcga cagaaaccgc gtgacctcga ggccctcgac cgcttccagc cacgtcaggg
      301 caagaaagct cgcattggcg gtaatgatct cccggtcggc gcaaaccagc agcccctcca
      361 ccgcggcatc cgccaggccc cgcatgcggt cggcctcgcg cagcgttcgt tcgcgctcgc
      421 gcacgtccag aaaggcgcca ccgagcgcga acccgatgat cagggtgctg atcaccgcga
      481 ccacgcccga cagccatagc ggcgtctcgt tgccgggggc gatgacggca tagcagccgc
      541 tgaaatcggc cgcacccatt gccgtgaaat gcatggcgca gatcgcgagc gtcaagacgc
      601 cggtcccggc gatctgccag ccaaagccgg gccgccaagt ggcgaggaac agcgccgcag
      661 ctccgaagat gataccgaac aggatcgagg tggccaccaa cggcggtgac caggcgatgc
      721 ggccgccgag cagcagcgcc gccatgccga catagtgcat cgccgaaatg cccacgccca
      781 ccactgcgcc gccgagcagc gcatcggtcc agcgtttgcc gacagcggcg atgccgaggc
      841 caccgccggt gatcgacacg gcgatcccca gcgacaccaa cgtctcgggg atgtcgtaac
      901 cggtcgggat gccgctcgaa aacgccagca ccgccacaaa gtgagtggcc cagatgccga
      961 agccaaccgc gaacgcggcg atcgccagcc acaccttctg catcccgcca gaagtgcggc
     1021 gggcatgggt gaggaggctg atcccggcaa acgcggacag cgcacacacg aacgcggcga
     1081 gcgccaccag ccgaaggtca tgtcgagtga ggaggacggt cagcacagtg tacacggaga
     1141 gaccttggat cggcgtcagg agtccgcgga gcctacggcc taatcgtgaa gatgccgttt
     1201 tctccggacg tcacgctcga tctattcggc ccgacggcag ccctcggatt ccaggactag
     1261 ccgttggcct ccctcaggcc tccaccagcc ggccatgctc catcgtcacg ctgcggttgc
     1321 agaactcctt gacgaggctc tccgaatggc tggcaagaat gacgatgggc gttctgtgaa
     1381 aaagcccctc gatgcgctgc cgcgccttct tctgaaatga agtatcgccg gcgccaatcc
     1441 cctcgtcgat gagcaggatg tcattgttgg cagccgtgga gacggcaaag gccagccgcg
     1501 cgaacatacc cgccgagtag gtgcgcatcg gcaatgccag aaaatcgccg agttcggtga
     1561 ag
//
LOCUS       DATAVD010001531         1919 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2007307, whole genome shotgun sequence.
ACCESSION   DATAVD010001531 DATAVD010000000
VERSION     DATAVD010001531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2007307"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..774)
                     /locus_tag="VHX39_29445"
     CDS             complement(<1..774)
                     /locus_tag="VHX39_29445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018307989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEX3995319.1"
                     /translation="MISRVALYARYSSDLQRDASIEDQLRLCREYATRQGWTVMDSYS
                     DRAISGASMLRPGLQDLLADAARGRFDFILAEGLDRLSRDQEDTARIFKQLNFVGIQL
                     FTVAEGEIGELHIGFKSTLNALYLKDLAAKTRRGMRGRVEAGKSGGGLCYGYAVRRSL
                     NADATLSTGDREIVPAEAETICRVFREFAAGKSPRQIAIGLNHDSIAAPGGEGWGQST
                     INGNPKRGTGILNNELYIGRLVWNRLHYVKDPATGKRVSR"
     gene            1614..1919
                     /locus_tag="VHX39_29450"
                     /pseudo
     CDS             1614..1919
                     /locus_tag="VHX39_29450"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
BASE COUNT          355 a          579 c          617 g          368 t
ORIGIN      
        1 ccgggagacg cgcttgccgg tggccggatc ctttacatag tgcagccggt tccacacgag
       61 gcggccaata tagagttcgt tgttcaggat accggtgccg cgcttcgggt tgccattgat
      121 cgtgctttgc ccccagccct cgccgccagg agcggcgatg ctgtcgtggt tgagaccaat
      181 ggcgatctgg cgcggtgatt tgccggccgc aaactccctg aacacccggc agatggtctc
      241 tgcctcggcg ggcacaatct ccctgtcgcc ggtactcagc gtggcatcgg cattaaggct
      301 gcgccgaacg gcataaccgt aacacaatcc gccgccggat ttaccagcct cgacccgccc
      361 gcgcatgccg cggcgcgtct tggcggcgag gtccttgaga taaagggcgt tgagggtcga
      421 cttgaagccg atatgcagct cgccgatctc gccttctgcg acggtgaaca gctggatgcc
      481 gacaaagttc agctgcttga aaatgcgggc ggtgtcttcc tggtcgcggc tcagccggtc
      541 cagcccctcg gcgagaataa agtcgaagcg gccgcgcgcg gcatcggcga gcaggtcctg
      601 gagcccaggg cgcagcattg acgccccgga aattgcccgg tcggaatagc tgtccattac
      661 cgtccagccc tggcgcgtcg cgtactcacg gcagagccgc agttggtcct cgatcgaggc
      721 atcgcgttgc aggtcggagc tgtaccgggc gtaaagcgca acgcggctga tcatcgacgg
      781 cctcaagatt gctggggccg tagcttgccc tccgatggga gggcgttgtc aagcggatct
      841 gaagccggtc gggccgggga ggggccagct tcttgtggcg gggctgactg tcctgtgttg
      901 gcgatggtga tggcggcgtt atccggcgcc ggttcgctgg tcgatcggtg caagagctcc
      961 tgcgccaact gacgtcccaa tagccgcgcc agcgccttgg cggcttcgag tatcgggaca
     1021 gcgcaaggct ccgcgatacc aggtggtgcc acctggatat cgtgttggtg tcgccgtgac
     1081 gaagggcgag atgaaccagc gttgcgcata atggcagctt agtttcgcca cggatgaaac
     1141 cggtagaaaa atcgtatttt gaaaagtcta gcaaaattcg caatacattt aaaatgtaaa
     1201 aaaagaaaac cgtgcctcga aagacgacgg atacaaggcg taacaattat cgatatcaaa
     1261 aaaatgaggt ggtatgctgc gtgcctgcgt atcgtctggc tatgagcaat tatgatttcc
     1321 gatcgttagc cagccatgcg cgcgtatccg cgcgcagctg ggcagggggc tccgcccccg
     1381 tgcacccccg tcctgcggac gacgtgaagg cgctcgccca tggctaggcg cggcagtgaa
     1441 aagcgccgca aaccggcgca ggtgttggtg cggttgacca acgaacagtg ggcggccgtg
     1501 gccgcgcatg tcgaagccgc gcaggtcacg accgcaacct ggttgcgcct gatcattgcc
     1561 ggtgcgatcg gcgttgagcc tgggccggtg ccaagcaggg ctataccgcc gcaggggccg
     1621 gcgccgcgct gccggtgtcg gtcctgcatt atgtcctgcg cacgcgggag ggcgtgatcc
     1681 tcgacgatgc cgccaccgag aacgactttt ctgccgatcc ctacatccgg cagcatggcg
     1741 cgcgctccgt tctctgcttg ccgttgctga accagtccaa gctcatcggc acgctctatc
     1801 tggaaaacaa cctcgccccg cgcgtcttcg cgcccgcgcg gatcgcggtg ctcaaactgc
     1861 tcgcctcgca ggcagcggtc tcgctggaaa atacccgtct gtatcatgat cttgagcag
//
LOCUS       DATAVD010001532         3687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1635654, whole genome shotgun sequence.
ACCESSION   DATAVD010001532 DATAVD010000000
VERSION     DATAVD010001532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3687
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1635654"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1274
                     /locus_tag="VHX39_29455"
     CDS             <1..1274
                     /locus_tag="VHX39_29455"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995320.1"
                     /translation="WRVLALVAGGYFFDVLDLTILGALVPDMIHTGFITAPQVALVGS
                     STLIGLLIGCVGQGEFTDRFGRKAVYQFNLLLYGVATIAAAFSPSYIWLAAFRFIAGI
                     GLGAEQPLCFSYTAEYAPKNIRGRILALMQMIGGAFPWPVGILLALGFRDTIGWRGIW
                     VVIGIGALIIFVLRFSLPESPRWLATHGKGQRALDILKRMNLTVPPLETLAVDAASDT
                     KSDPMAFVLRQYPRNVFASMICFFAFFGIANGLGTWLPNIMAGEGFSITKSLTFTLGM
                     TIAYPCSSAFMMFSLERFGRIRTAVTAFVLAGLFAAAFASARSEAMLLAVGFVMFFCI
                     QLAGNSMQIFASEVFPTNARASGFGLAHSGGRIGAAIIVPGFLYIQTTWGVPAVFATI
                     AVMLAVAAVAVTQIGHETRGLALDAIAPPTG"
     gene            complement(1372..1575)
                     /locus_tag="VHX39_29460"
     CDS             complement(1372..1575)
                     /locus_tag="VHX39_29460"
                     /inference="COORDINATES: protein motif:HMM:NF021923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042742 - defense response to bacterium
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Blp family class II bacteriocin"
                     /protein_id="HEX3995321.1"
                     /translation="MTNTADQTIASPMLLTNDELDQIGGAMGHINEITGAAAAGAALG
                     SAFGPVGTVVGGAVGGLLGWLFG"
     gene            complement(2419..3228)
                     /locus_tag="VHX39_29465"
     CDS             complement(2419..3228)
                     /locus_tag="VHX39_29465"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX3995322.1"
                     /translation="MKENSIRRAVREGRAALGTGLKEFASRGVPWIIEAAGFDYCAID
                     HEHGAFDMETIADLASWFQATNVSAIVRIHKSFAHLIPGILDQGIMGIQVSEVETAQE
                     ARAIARLAKYPPVGNRGISGQGPHTGYRSYGARHATEYAPWANENVILCPSIESLEGL
                     ENVEAIAAVEGIDMIAYGHSDLSAQLGVHLDLEHPKFKAAVRRIAAACNAHGKLARGS
                     AETEAQIEEYWQLGCKVLNLPGNDVSTYLDGMKARAARAHARLKSIGVPTP"
     gene            3330..3626
                     /locus_tag="VHX39_29470"
     CDS             3330..3626
                     /locus_tag="VHX39_29470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995323.1"
                     /translation="MFATIRRYEGVGSTDVIELAAKEQFFPLFERLPGFVSYTLVDTG
                     EQSVTSVTIFSTRDQAEAGNVAVRELVQQILSRVVPNPATVVLGKVIAHLDQWP"
BASE COUNT          614 a         1165 c         1115 g          793 t
ORIGIN      
        1 actggcgggt tctggcgctc gttgccggtg gctatttttt cgatgttctc gacctgacga
       61 tcctcggagc gctggtgccc gacatgatcc acaccggctt catcactgcg ccgcaggtcg
      121 cgttggtggg gagctccacc ctcataggcc tgctgatcgg ctgcgtcggc cagggcgagt
      181 tcaccgaccg cttcggccgc aaggcggtct atcaattcaa cctgctcctc tacggtgtgg
      241 caacgatcgc cgccgcgttt tcgccgagtt acatttggct cgcggcgttt cgtttcatcg
      301 ccgggatcgg gctcggcgcc gagcagccgc tgtgcttttc gtatacggct gaatatgcgc
      361 cgaaaaacat tcgcggccgc atcctcgctt tgatgcagat gatcggcggc gccttcccgt
      421 ggccggtcgg catcctgctg gcactcggct tccgcgacac gattggctgg cgcgggatct
      481 gggtcgtgat cggcatcggc gcgctgatca ttttcgtcct gcgcttctcg ttgccggagt
      541 cgccgcgttg gctggcgacg catggcaagg ggcagcgcgc cctcgacatc ttaaagcgca
      601 tgaacctgac tgtgccgccg cttgagacac ttgccgtcga cgccgcaagc gacaccaaaa
      661 gcgatccaat ggccttcgtg ttgcggcaat acccgcgcaa cgtgttcgcg tcgatgattt
      721 gtttcttcgc gttcttcggc atcgccaacg ggctcggcac ctggctgccc aacatcatgg
      781 cgggcgaggg gttctcgatc accaaatcgt tgacgttcac tctcggcatg acgatcgcgt
      841 atccgtgcag cagtgcgttc atgatgttct cgctcgaacg tttcggccgc attcgcactg
      901 cggtgacggc cttcgtgctc gccgggctgt ttgccgcggc gttcgcctcg gcgcggtcgg
      961 aggcaatgct gcttgccgtc ggcttcgtaa tgttcttctg catccaattg gcggggaact
     1021 cgatgcagat tttcgcgtct gaggtgttcc cgaccaatgc gcgcgcttcc ggtttcggcc
     1081 ttgcccattc aggcggccgg attggtgccg cgatcatcgt ccccgggttt ctctacattc
     1141 aaaccacctg gggcgttccc gccgtgtttg ccacgattgc ggtgatgctg gcagtggccg
     1201 ccgttgcggt gacgcagatc ggtcacgaga cgcgcggtct tgcccttgac gcaatcgcac
     1261 cgccgaccgg gtgaccgtag gcggttgcga tttcggcgtg agatggtccg ctcctgatga
     1321 acataccaga aggcgacgtg cgcggccttc tggtatgccc tcgaccagat ttcagccaaa
     1381 caaccatccg aggagacccc cgacggcgcc gccgaccacg gttcccaccg ggccaaacgc
     1441 ggacccaagc gcggcaccgg ccgcggccgc gccggtaatc tcattgatgt gccccatcgc
     1501 gccgccaatt tgatcaagtt cgtcgttggt gagaagcatg ggcgatgcaa tcgtctgatc
     1561 tgcagtgttg gtcattgctt tgttccttca tgttgcgttc gcgccggtcg tcattgactg
     1621 acacacgcct tatgaaggac gcattagggg cttgctgtgc catgcggcac accggcgaca
     1681 aaatctgatc atctcaggca gacgacttca atcggtcgtc gaaaggtgtg tcggagatac
     1741 aggtccaggc caggttaccg tgacaatgcc gtcccttgtg caacaaggtt cgagagaaac
     1801 gcccatctac gcctttggcg agatttcata tgtggatgca ttcggtgaat gtcggatgac
     1861 acaatacagg ttttattata ccggggctgg taccgacatt gggaaccggg ttggcatgac
     1921 ttaatctcga cgaaggcaat actgaagtgc catgccccag gacccaataa acggccggta
     1981 gccggcgaag ttgatgtcgt ttagggttat ccggcagcct cggaggcacg ttatgtcgaa
     2041 aatgccaatt ctgatcggtt cgctcgtggc tctgatcggt ttcgcggccc aggggaacgc
     2101 acagggatat tacaggcccc ctccgtacgg tcccagcgat ccgcgtccct accctgggcc
     2161 attcgtccca cgcgacactt acccgccgcc gagcttctcg gtgctgcgat gcgtcgcgcc
     2221 tttgccgggt taccggatgc cgcccccggt ccaaatttgc gcggcgcccc gggccgcccc
     2281 ggggagcccg tgttcatgct ggggtccacg agggcgctta ctccccggcc gggtggaata
     2341 ggccttcagc cactgcggca cgcgagtcgg cccatcctac cgggccggct ggtttatgcc
     2401 gccatctggc gccactgctc agggagtcgg tacgccgatc gatttcaaac gcgcatgggc
     2461 tcgggcggca cgcgccttca tcccgtcgag atacgtgctc acatcgtttc ccggcaggtt
     2521 cagcaccttg cacccaagtt gccagtattc ctcgatctgc gcctcggtct ccgccgatcc
     2581 ccgagcgagc ttgccatggg cattgcacgc cgctgcgatc cgccgcaccg ccgccttgaa
     2641 cttcgggtgc tcgaggtcaa ggtgaactcc aagctgcgca ctcaggtccg aatgcccata
     2701 cgcgatcatg tcgatcccct cgaccgcggc gatcgcctcg acattttcca gcccctcgag
     2761 cgactcgatc gacgggcaca ggatgacgtt ttcgttggcc catggcgcgt attcggtggc
     2821 gtggcgcgcg ccgtaacttc ggtagccggt gtgtggcccc tgccctgaga tgcctcggtt
     2881 gccgaccggc ggatacttcg ccaaccgcgc gatcgcccgc gcctcctggg cggtttccac
     2941 ctcggagacc tgaatgccca tgatgccctg atccaggatg ccggggatga gatgcgcgaa
     3001 cgacttgtgg atgcgaacga tggctgagac gttcgtggcc tggaaccagc tcgccaaatc
     3061 cgcgatcgtt tccatgtcga atgcgccgtg ttcgtggtcg atcgcgcagt aatcgaagcc
     3121 ggccgcctcg atgatccagg gaacgccccg tgaggcgaac tccttcagtc cggtgcccag
     3181 agccgcccgc ccctcgcgca ccgcccgccg tatgctgttt tctttcatgg ctcgctcccg
     3241 gcttcctgcg tcttgtgcga tgatgatagg gcctgaactg cgcagcgcaa cgcggcctga
     3301 ccaaggtgtt ggccaacggg aggctcggaa tgttcgcaac gatccggaga tacgaaggcg
     3361 tcggaagcac tgacgtgatc gaactggcag ccaaagagca attctttccg ctgtttgaga
     3421 ggctgccggg tttcgtttcg tacacgctcg tcgacactgg cgagcaatcg gtcacgtcgg
     3481 taacgatctt cagcacaagg gaccaggcgg aggctggcaa cgtcgctgtc cgtgagctgg
     3541 ttcaacagat tctcagccgc gtggttccca atccggcaac agttgtgctt ggcaaggtga
     3601 tagcgcacct cgatcaatgg ccatgacgcg cagtggccat gttcaccgac cgcctgcgca
     3661 ggttcgtaca tcacgcagca aacgcgc
//
LOCUS       DATAVD010001533         3331 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1635808, whole genome shotgun sequence.
ACCESSION   DATAVD010001533 DATAVD010000000
VERSION     DATAVD010001533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3331
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1635808"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..396)
                     /locus_tag="VHX39_29475"
     CDS             complement(<1..396)
                     /locus_tag="VHX39_29475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018580 - nitronate monooxygenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEX3995324.1"
                     /translation="MPITTRLTERLGVRHPVLLAPMDLVAGGRLAAAVSQAGGFGIIG
                     GGYGDEAWLTREMDAAGDARVGVGFITWSMARQPRLLDLALERRPPAIMLSFGDIRPH
                     AEKISRAGALLICQVQTLDQARDAAANGAD"
     gene            complement(497..1402)
                     /locus_tag="VHX39_29480"
     CDS             complement(497..1402)
                     /locus_tag="VHX39_29480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3995325.1"
                     /translation="MDTASLHVFETVARTGGMNRAADELHTVQSNVTARIRALETELG
                     CPLFERHSRGVALTAAGQRLLPYARRVAWLLADAARATRDDGQPRGPLTIGSLETTAA
                     LRLSPLIARYASACPEVDIALRPGTTVELIDAVLERRLEGAFVCGPVAHQSLIEQVMF
                     EEELSVLAAPGITSLEQATQGGIARIVVLRAGCSYRQRLEMLLARRGIAVPRMMEFGT
                     LEAIFGCVSAGLGITLLPRALIGPVWHDGRVSLHSLPPEEAMVTTVFIHRREAHLSSA
                     LRAFLDHVRTGMTFDIVSGDRSDPI"
     gene            1504..2667
                     /locus_tag="VHX39_29485"
     CDS             1504..2667
                     /locus_tag="VHX39_29485"
                     /inference="COORDINATES: protein motif:HMM:NF018485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbfB/YjiJ family MFS transporter"
                     /protein_id="HEX3995326.1"
                     /translation="MLQQATVGRRATEGSPVSIAFAGLIAMAVGIGIGRFVYTPILPA
                     MLADLGLSKATAGLIASANFAGYLVGALGAMRTVLPGSRRSWLLGALVLSGVTTGAMG
                     FCSTRPAFLVLRFLGGVASAQALILSCALVLERLTELERPGLGALHFAGVGVGIAVSA
                     VLVAFLSGDGWAMMWQVSGAMSLVGALVVALLLPSVPDPPAVHRSSAPMRSDPPLWRM
                     TAAYGLFGFGYVITATFLVAIVRATPAIRDLEPVVWIVVGLAAAPSVWFWHFLGGRIG
                     LATAFGVAALAEAAGVLASVIWPSPVGICLAAALVGGTFMGLTALGLMRGRELAALGD
                     PRRVMAAMTGAFGVGQIIGPAMAGVVSDVTGGFLLPSVAAAGALVAAAFLGRR"
     gene            complement(2695..>3331)
                     /locus_tag="VHX39_29490"
     CDS             complement(2695..>3331)
                     /locus_tag="VHX39_29490"
                     /inference="COORDINATES: protein motif:HMM:NF012432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HEX3995327.1"
                     /translation="RISGFPLVQSANLVEASWDMGGFVMFSGVLKRIASKLSKIANDI
                     RLLSSGPRGGIGEYSIPAMQPGSSIMPGKVNPVIPEVLNIVCFQVIGNDLAVTMAAEG
                     GQLQLNAFEPLIAHNILSSMALLKNAIGTFTERCIEGIEARPEQCARHIEAGVSTVTA
                     LVPLLGYERAADLAKRALADGKTVRELALQTGLLTAEKLDEVLRPDRLAAG"
BASE COUNT          533 a         1057 c         1106 g          635 t
ORIGIN      
        1 gtcggctccg ttcgccgctg catccctggc ctggtcgagc gtctgcacct ggcatatcag
       61 cagtgcgccg gcgcgactga tcttctctgc atgcggccga atatcgccga acgacagcat
      121 gatcgccggc ggacgacgct ccagtgccag atcgagcagc cgaggctgcc gtgccatgct
      181 ccaggtgata aatcccactc cgacgcgcgc atcaccggcg gcgtccattt cacgcgtcaa
      241 ccaggcctcg tcgccgtatc cgccgccgat gatgccgaag cctccggcct ggctcaccgc
      301 cgccgccaga cgcccaccgg cgacgagatc catcggagcg agcaggaccg ggtgcctgac
      361 accgagccgc tctgtcagtc gcgtcgtgat gggcatttcc catactcccc agtgatttcc
      421 cgcatcatgg caaccggtgg gtccaacatt cgccatggcc cgtcagatgc accggatccc
      481 gcgggccggc aaacgatcag atcggatcgg acctatctcc cgaaacgata tcgaatgtca
      541 ttcccgttcg cacgtgatcg agaaacgccc gcagagcact cgagagatgc gcttcacgcc
      601 gatggatgaa gaccgttgtc accatggctt cctcgggcgg cagactgtgc aggctgaccc
      661 ggccatcgtg ccacactggg ccgatcagcg cgcgcggcaa caacgtgatg ccgaggccgg
      721 ccgacacgca gccaaagatc gcctccagcg tgccaaattc catcatccgc ggcaccgcga
      781 tgccgcgtcg cgccaaaagc atttccagcc gctgacgata ggagcagccg gcccgcagta
      841 ccacgattcg ggcgatgccg ccttgcgttg cctgctccag cgacgtgatc ccgggggcag
      901 caaggacgga aagctcctcc tcgaacatga cctgctcgat cagcgactga tgcgccaccg
      961 gtccgcacac aaaggcgccc tcgaggcggc gctcgagcac ggcgtcgatc agctccacgg
     1021 tggtgccggg acgcagcgca atgtcgacct cggggcaggc ggaggcatag cgcgcgatca
     1081 agggagacag cctgagggcg gcggtcgttt ccagcgagcc gatggtcaac gggccgcgcg
     1141 gctggccgtc gtccctggtg gcccgtgctg cgtcggccag cagccaggcg acacggcggg
     1201 catagggcaa caggcgctgg ccggccgcgg tgagcgcgac accgcggcta tggcgttcga
     1261 acaacgggca accaagctcg gtttcgagcg cacgaatgcg cgcggtgacg ttggactgga
     1321 cggtgtgcag ttcgtcggca gcgcggttca tgccgccggt gcgggcaacg gtttcgaaga
     1381 catgcaagct ggcggtatcc atggacgagg ttcctggggg gactaagcta tcttatatag
     1441 cgatggatac catcaaaagt aatcgtttga aagcgccggg gcagacgatt aattggctgt
     1501 cccatgttac agcaagccac cgtcggccgc cgcgccaccg agggttcgcc ggtttccatc
     1561 gcgttcgccg gattgatcgc aatggcggtt gggatcggca tcggccgttt cgtctacaca
     1621 cccattttgc cggccatgct ggctgacctt ggtctgagca aggccaccgc cggactgatc
     1681 gcctcggcca atttcgccgg atatctggtt ggcgcactcg gtgctatgcg aacggttttg
     1741 cctggctcgc ggcggtcctg gctgcttggc gcgctggtgc tcagtggcgt gacaaccggc
     1801 gcgatggggt tttgcagcac gcgacccgct tttcttgttc tgcgctttct gggtggggtg
     1861 gcgagcgcgc aggcattgat cctgtcctgt gcgctggtgc tcgagcggtt gactgaatta
     1921 gagcggcccg gattgggcgc gctgcatttc gccggcgtgg gggttgggat cgcggtgtcg
     1981 gccgttttgg ttgcatttct gtctggcgat ggttgggcga tgatgtggca ggtgagcggc
     2041 gcaatgtcgc tggtgggcgc gctggttgtc gcgctgttgc tgccttccgt tccggacccg
     2101 cctgccgtgc atcggtcatc ggcgccgatg aggagcgatc cgcctctgtg gcgaatgacg
     2161 gcggcgtacg gactgttcgg ctttggctat gtcatcaccg caacgttcct ggtggcgatc
     2221 gtgcgcgcca ctcctgcgat ccgggacctt gagccagtgg tgtggatcgt cgttggcctc
     2281 gccgcggcgc cgtcagtctg gttctggcat tttctcggcg gccggatcgg cctggcaacc
     2341 gcgtttggtg tcgccgcgct ggccgaggcc gcgggcgtgc tggcgtccgt gatctggccc
     2401 tctcccgttg ggatttgtct cgccgccgcg ttggtgggtg gcacgttcat ggggctcacc
     2461 gctctgggcc tgatgcgcgg gagggagctg gctgcgttgg gcgacccgcg acgcgtgatg
     2521 gcggcaatga ccggggcgtt cggggtgggc cagatcattg gaccggcgat ggctggcgtg
     2581 gtttccgacg tgacgggggg gttcctgctg ccatcggtgg cggcggccgg agccctggtc
     2641 gcggcggcgt ttctgggcag acggtgacga taccggggct ctggggaggt tgcgtcaacc
     2701 cgccgccagc cggtccggac gcaacacctc atccaacttc tccgccgtca gcagcccggt
     2761 ttgcagcgcc agttcgcgca cggtcttgcc atcggcgagc gcccgcttcg ccaggtcagc
     2821 cgctcgctcg tagcccagaa gcggtaccag cgcggtgact gtcgacacgc ctgcctcgat
     2881 atggcgggca cattgttccg gtcgcgcctc gatcccttcg atgcaacgtt cggtgaacgt
     2941 tccgatggca tttttcagca gcgccatcga cgacaggata ttatgcgcaa tcagcggctc
     3001 gaatgcgttg agctgcaatt gcccgccctc cgccgccatg gtcaccgcaa gatcgttgcc
     3061 gatgacctga aagcacacga tgttcagaac ttccggaata accggattga ccttgcccgg
     3121 cataatggat gagcccggtt gcatcgccgg aattgaatat tcaccgatcc cgccgcgcgg
     3181 gcccgaggac aacagccgaa tgtcgttggc gatcttcgac agcttgctgg cgatccgctt
     3241 gagcacgccg gagaacatga cgaagccgcc catgtcccag ctcgcttcca cgagatttgc
     3301 cgactgcacc agcggaaatc ccgatatacg g
//
LOCUS       DATAVD010001534         2522 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2193522, whole genome shotgun sequence.
ACCESSION   DATAVD010001534 DATAVD010000000
VERSION     DATAVD010001534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2522
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2193522"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..991)
                     /locus_tag="VHX39_29495"
     CDS             complement(<1..991)
                     /locus_tag="VHX39_29495"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3995328.1"
                     /translation="MATPHYDWIAYHATTRGDHTAMVDLATGREFSYAQFHDRVGRLA
                     SGLRSAYGVKRGDRVGVLAHNSSDVFEIQFACARLGAVFVPMNWRLTVPELTYIVGDC
                     SPVVLLHDAEFEDAALQLAAACDVPHLHPRAGAYERLIAGAQNDVTPEPLTHDDTAAL
                     LYTSGTTGHPKGAIITHGMRFWQTINLTGPERLTADSVCLVTLPLFHVGGLDVYANPL
                     FHFGGKVLVMRGFDPADTLRLFTDPTAGLTHYIGAPAHYLFMAQLPEFETAEFSPNLL
                     ACIAAAPVPLPQLRQWEERGLPLLQGYGMTETCGVVTMMEPEDRVRKAGSAGKA"
     gene            1130..>2522
                     /locus_tag="VHX39_29500"
     CDS             1130..>2522
                     /locus_tag="VHX39_29500"
                     /inference="COORDINATES: protein motif:HMM:NF013003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HEX3995329.1"
                     /translation="MVGTEPGGSGSKPVVTGLTFDREPLAPPLAKKANDLDALRAAVI
                     DAAGVSGALWLSYLFVLFYFLIAAGGVTHKDLFLENPVKLPFLNVDLPLRGFFFLGPL
                     IFLIVHTYVLLHFVVLAGKVRAFDAALLDQVTWFEARASLRRQLPTNIFVQFLAGPRE
                     VRLGVVSVMLWSIAVISLVAGPVAVLLFFELQFLPYHGEWITWVQRLAVICDLLVLWT
                     LWPRIAARAVDTESGQAFGWRRPRWFSTRVMRATLAAGCLILAVLVPLVTTFPGETID
                     PWIPRSVNLPPWGTIPTPVLNWTRRLLVEGEIDPAARRPVSPWSNRLVLPGFDVIDHT
                     RLDSEAKIAALPETVSLRGRQLRRAVLTDAGLRKADLTGADLSEAQLDGADLRLAKLE
                     CEQSDAAGQHQTCANLQGASLRRVSLQGTSLDGVSMQGVSLADAKLQGALLIQAKLQG
                     AVLNGANLEGAALI"
BASE COUNT          420 a          758 c          839 g          505 t
ORIGIN      
        1 aggccttgcc cgctgacccg gcttttcgca cgcggtcctc cggctccatc atcgtgacga
       61 cgccgcaggt ttcggtcatg ccgtaacctt gcagcaatgg cagcccgcgt tcctcccact
      121 ggcgcaattg cggcaacggc accggagcgg cggcgatgca ggccagcagg ttcgggctga
      181 attctgcagt ctcgaactcc ggcagttgcg ccatgaacag gtaatgcgcg ggtgcgccga
      241 tgtaatgcgt aaggccggct gtcgggtcgg taaataaccg cagcgtatcc gccggatcga
      301 agccgcgcat caccagcacc ttgccgccga aatgaaacag cgggttggcg taaacatcga
      361 gcccgccgac gtgaaacagc ggcagagtca caagacacac gctgtcggcg gtcagccgtt
      421 ccggacccgt caggttgatg gtctgccaga accgcatgcc gtgggtgatg atcgcgcctt
      481 tgggatggcc cgtggtgccc gacgtataaa gcagcgctgc ggtatcgtcg tgggtcaacg
      541 gttccggcgt aacatcgttc tgagctccgg cgatcaaccg ttcataggcg ccggcccgcg
      601 gatgcaaatg cggcacatcg caggcggcgg cgagttgcag tgcggcgtcc tcgaactccg
      661 catcgtgcag cagcacgacg ggcgagcaat cgccgacgat ataggtcagt tcgggcaccg
      721 tcagccgcca gttcatcggc acgaacaccg cgccgaggcg ggcacaggcg aactggatct
      781 cgaacacatc ggaagagttg tgggcgagca cgccaacccg gtcgccacgc ttcacgccat
      841 aagccgaacg caggccagac gcgagccggc caacgcgatc gtggaactgc gcgtagctga
      901 actcacggcc ggtcgcgagg tcgaccatgg cggtatggtc gccacgggtc gtggcgtggt
      961 acgcgatcca gtcgtagtgc ggcgttgcca tggttgcctc cctggtcggg aacgttgtcc
     1021 gttcacggtt tcgcccatcc tggcgcgagg ccaatcccgt cgcaagctgc cggtcgacaa
     1081 aacggcgatc tgtgcggtat tggtgccgta acgaacgtga cggatgcaaa tggttggaac
     1141 cgagcctgga ggatcggggt cgaagccggt ggtcaccggt cttaccttcg accgcgagcc
     1201 gctggcaccc ccgcttgcca agaaagccaa cgatctcgac gcgttgcgcg ccgccgtcat
     1261 cgatgcagcg ggtgtcagcg gcgcattatg gctgagttat ctgttcgtgt tgttttactt
     1321 tctgatcgcc gccgggggcg tgacgcacaa ggacctgttc ctcgaaaatc cggtcaaact
     1381 gccgttcctg aatgtcgatc tgccgctgcg cgggttcttc tttctgggcc cgctgatctt
     1441 tttgattgtg cacacttacg tgctgctgca cttcgtcgtg ctcgccggca aggtgcgggc
     1501 gttcgatgcc gccttgctgg atcaggtgac ctggtttgag gcccgtgcca gcctacggcg
     1561 gcaattgccg acgaacattt ttgtgcagtt cctggctggt ccgcgcgagg tgcggcttgg
     1621 cgtggtcagc gtgatgctgt ggtcgattgc cgtgatcagc ctggtggccg gcccggtggc
     1681 ggtgctgctg ttctttgaat tgcagttttt gccgtatcat ggggagtgga tcacgtgggt
     1741 gcagcggctg gctgtgatct gcgatctgct ggtgctttgg acgctttggc cgcgcatcgc
     1801 ggcccgtgca gtggataccg aatcaggcca ggcgttcggg tggcggcggc cgcgctggtt
     1861 ctccactcga gtgatgcgcg cgaccctggc agccggttgc ctgatcctcg ccgtgctggt
     1921 tcccctggtg acgacgtttc cgggtgaaac catcgatccg tggatcccgc gttccgtaaa
     1981 tttgcccccc tggggaacca tcccaacacc cgtcctgaac tggacgcgac gcctgctcgt
     2041 cgagggcgaa atcgatccgg cggcgcggcg gccggtcagc ccgtggtcga accgactcgt
     2101 gctgccgggt ttcgatgtga tcgaccacac caggctggac agtgaggcaa agattgccgc
     2161 actgccggaa actgtttcct tgcgcggccg ccagttgcgc agggctgtgc tgaccgatgc
     2221 cggcttgcgc aaggctgacc tgaccggcgc cgatctatcg gaagcacagt tggatggtgc
     2281 cgatcttcgc ctggcgaagc tggaatgcga acaatcggat gccgcaggtc agcaccagac
     2341 ctgcgcgaat ctgcagggtg cgtcgctgcg gcgcgtatca ctgcagggca cctcgctcga
     2401 tggcgtatcg atgcagggtg tgtcgctcgc tgacgcgaaa ttgcagggcg cgttgctcat
     2461 tcaggcgaag ctacagggcg cggtgctcaa tggtgcgaat ttggagggtg cggcgctcat
     2521 tt
//
LOCUS       DATAVD010001535         3543 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2378548, whole genome shotgun sequence.
ACCESSION   DATAVD010001535 DATAVD010000000
VERSION     DATAVD010001535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3543
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2378548"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(468..1634)
                     /locus_tag="VHX39_29505"
     CDS             complement(468..1634)
                     /locus_tag="VHX39_29505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HEX3995330.1"
                     /translation="MFRAEGAGYRAAQAGHLSLTQLKVMSAIENCRTAALGGHVDACE
                     DCGHRRIAYNSCRNRHCPKCQGAAARTWLAEREADLLPVGYFHVVFTLPTEVADIALQ
                     NKAIVYDLLFRAASETMMTIAADPKHLGARIGITAVLHTWGSAMTHHPHIHMIVPGGG
                     ISLDGQRWISSRPAFLLPVRVLGMLFRRLFLTRLIEFHKAGRLAFFGAQAGLADRRLF
                     LRYLAALRKKRWVIYAKPPFTGPEAVLAYLSRYTHRVAIANRRLIAFDETGVTFRYKD
                     YRRDGPDRQRVMTLAPHEFIRRFLLHVLPHGFHRIRHYGLLASSARKASITRARELLA
                     VAPPPEPVEVPEPLDWLPPCPCCGGRMTIIETFGRWRQPRAPPHAPASTGSTPS"
     gene            complement(1668..2573)
                     /locus_tag="VHX39_29510"
     CDS             complement(1668..2573)
                     /locus_tag="VHX39_29510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEX3995331.1"
                     /translation="MPGSTIDRPVSALRQRMIEDMVMRGLRSDTQHEYIRFVRSFAAF
                     LGRPPNTATAEDIRRFQVHQRESGVQPPTINCSVSALRFFFTVTLDRPDLSRRLVLAR
                     YPRKLPAVLSVEEVGQLLEAAPGIKYKAILGTAYGAGLRVSEVACLKVDDIDNTRMLI
                     RVEQGKGRKDRNAMLSPQLLALLRLWWKEGKRRSVMLPHGWLFPGRGATDPISTRQIN
                     RAIHEAAEAAGIRKRVSPHTLRHSFATHLLEQDVDIRVIQVLLGHSKLDTTALYARVA
                     TKTIRSVTGPLERLALLMQGEDPGG"
     gene            complement(2828..3289)
                     /locus_tag="VHX39_29515"
     CDS             complement(2828..3289)
                     /locus_tag="VHX39_29515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RES family NAD+ phosphorylase"
                     /protein_id="HEX3995332.1"
                     /translation="MILWRLSGRQHAEAFDGGYGLLFDGRWNTVGHAVTYCATSPSLC
                     VLEKLVHIEDPALLPELVMVTYEGPDTLQVEAIALESLPPDWRRQEGRTQRVGDEWYR
                     ARTAPLLRVPSAIVPLSGSPDLNVVINHNHPAAGQIRLRTLEPFVLDQRLL"
     gene            complement(3289..>3543)
                     /locus_tag="VHX39_29520"
     CDS             complement(3289..>3543)
                     /locus_tag="VHX39_29520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin Xre/MbcA/ParS toxin-binding
                     domain-containing protein"
                     /protein_id="HEX3995333.1"
                     /translation="QRTRRHRADKKQPLTVDESDRAVRLLRVQTLAEDTFDDVEKANR
                     WLRRPLGELGNEAPLAVAQTEAGARVIEAILGKIAWGAAA"
BASE COUNT          651 a         1059 c         1204 g          629 t
ORIGIN      
        1 aggctcggcg tgaccaataa actgtcgcga cgtcgagcag agccaaacag cgctttccac
       61 ccagtgctgc cagactatag catcggcaat tatgtccgct ttcgatgaat ggaccactcc
      121 ggctgagcgc ccggcaaggt gaaggttttc ggatgccggc catcgccggt cgcgcgtctg
      181 ggcatggggc cggcgtccga aaaccgccca tgcacgaacc cgcggggatg cggcgatggt
      241 ctatggggat ttcgagtttt gctctgttgc ggtgatggcg ggaccggctc ggcgctgggg
      301 tcggcgggga cccgctgagt gagatttttt gccaggcgga ccgtggatcg cgatctggcc
      361 acagctgata tccagcacgt ttgcgctggt cttggtgaag ggcgtgcctg ggggcattcg
      421 ccgcaatagg ggtgccgcgg cgtgaggtga gcgcaagccg tgccgggtca cgacggggta
      481 ctcccggttg atgcgggcgc gtgaggtggc gcgcgaggtt gcctccatcg cccgaaggtc
      541 tcgatgatgg tcatgcgtcc gccgcagcag ggacagggtg gcagccaatc gagtggttct
      601 ggcacttcga cgggctccgg cggcggcgcc acggcaagca gttcgcgggc acgcgtgata
      661 ctggccttgc gtgcggaact ggcgagcaag ccgtaatggc ggatgcggtg gaagccatgt
      721 ggcaggacat ggagcaggaa gcggcggatg aactcgtgcg gcgcgagggt catgacgcgc
      781 tgccggtcgg gaccatcgcg gcggtagtcc ttgtagcgga aggtgacgcc ggtctcgtcg
      841 aacgcgatca ggcgccggtt ggcgatagcg acccgatggg tatagcgcga gagataggcg
      901 agcacggcct cggggccagt gaacggcggt ttggcataga tcacccatcg cttcttcctg
      961 agcgcggcga gatagcgcag gaagaggcgg cggtcggcga gaccggcctg cgcgccgaag
     1021 aaggcaaggc gccccgcctt atggaactcg atcagccggg tgaggaacag gcggcggaag
     1081 agcataccca gcacccgcac cggcaggagg aaggctggac gtgaagagat ccagcgctgc
     1141 ccgtcgagcg agatgccgcc gcccggcacg atcatgtgga tatggggatg gtgtgtcatc
     1201 gctgatcccc aggtgtggag cacggcagtg atgccgatgc gggcgccgag gtgcttaggg
     1261 tcggccgcga tcgtcatcat cgtctccgac gccgcacgga acagcagatc gtagacgatc
     1321 gccttgttct gcaaggcgat gtctgcgact tcggtgggca gcgtgaagac gacatggaag
     1381 tagccgaccg gcagcaggtc ggcctcgcgc tcggcgagcc aggtgcgcgc agcggcaccc
     1441 tggcacttgg ggcagtgccg gttgcggcag ctgttgtagg caatgcgccg gtgcccgcag
     1501 tcctcgcagg catcgacgtg accgccgagt gctgccgtgc ggcagttctc gatcgccgac
     1561 atgaccttga gctgggtcag gctcagatga ccggcctggg cagcacgata gccggcacct
     1621 tcagctcgga agatatcggc gacctcgatc gaggtgcgca agccgcttca gccgccggga
     1681 tcctcgccct gcatcaacaa cgccagacgc tcgagaggac cggtcaccga gcggatcgtc
     1741 ttggtcgcaa cgcgcgcata gagcgcggtc gtatcaagct tgctgtgccc caacagaacc
     1801 tggatcacgc ggatatcgac atcctgttcc agcagatggg tggcgaagct gtggcgcagc
     1861 gtatggggcg acacccgctt cctgatcccg gctgcttcgg ccgcctcatg gatggcgcgg
     1921 ttgatctgcc gggttgagat cggatcggtg gcaccgcgtc cggggaacag ccagccatgc
     1981 ggcaacatga cagagcgccg cttgccttcc ttccaccaca gccgcagcag cgcgagcagc
     2041 tggggtgaca gcatggcgtt gcggtccttg cgtcccttgc cctgttcgac cctgatcagc
     2101 atgcgtgtgt tgtcgatatc atcgaccttg aggcaggcca cttccgaaac gcgtaggccc
     2161 gcgccatagg cggtgccaag gatcgccttg tatttgatgc ctggtgccgc ttcgagcagc
     2221 tggcccactt cctcgacact cagaaccgct ggcagtttgc gcggatagcg cgccaggacc
     2281 aggcgccgtg acaggtccgg ccggtcgagt gtcacggtga agaagaagcg cagcgccgag
     2341 acggaacagt tgattgtggg tggttgtacc ccgctctcgc gctggtgcac ctgaaaccgg
     2401 cgaatatcct cagcggttgc cgtattgggt ggtcgcccca ggaaggctgc gaagctgcgc
     2461 acaaaccgaa tatactcgtg ctgcgtatcg gatcgcaggc cgcgcattac catgtcttcg
     2521 atcatgcgct gccgcagcgc gctgacgggg cggtcgatag ttgaaccagg catcggaagt
     2581 tcctttcatg atgaagggaa ctccatggtc gagagacaac tacgccccgc tcaaggcttc
     2641 atcgaaaagg agcgtaagta ttgaggtcca ggggctcggc ccctggcggg gtttggggca
     2701 gcgccccaat cttgcttgct gcatcggtca atggttcggg cgccgagtat atttcatccc
     2761 acagcaccaa tcccgcgaag cgggttcgtg caagggtcga gagcggctat tgccaggcag
     2821 ggatcagtca gagcagccgc tggtcgagca caaaaggctc cagcgtccgg agcctgattt
     2881 gcccggccgc cggatgattg tgattgatta cgacgtttag atcgggagag cccgagagcg
     2941 gcacaatcgc cgagggcacc cggagcaggg gagccgttcg cgctcgatac cattcatcgc
     3001 ctacccgctg cgtccgtcct tcctgacgac gccagtcagg tggcagactt tcaagagcga
     3061 tcgcctcgac ttgtagcgtg tcgggtcctt cgtacgtgac catcaccaat tcaggcaaaa
     3121 gcgccgggtc ttcgatgtga acaagctttt ccagaacgca cagcgacggc gaggtcgcgc
     3181 agtaggtcac ggcgtggccg accgtgttcc aacggccgtc gaacagcaat ccgtagccgc
     3241 cgtcaaaagc ttccgcgtgc tggcgccctg aaagacgcca aaggatcatc aggccgcggc
     3301 gccccaggca atcttgccaa gaattgcctc gatgacccgt gcgcctgctt ccgtctgggc
     3361 aacggcgagc ggcgcttcat tgccgagttc ccccagcggc cgacgcagcc aacgattggc
     3421 cttctccacg tcatcaaacg tatcctcggc aagcgtttgc acacgcagga gcctgaccgc
     3481 gcgatccgac tcatcaaccg tgagcggctg cttcttgtcg gcacgatgcc gacgggtccg
     3541 ctg
//
LOCUS       DATAVD010001536         1888 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1075076, whole genome shotgun sequence.
ACCESSION   DATAVD010001536 DATAVD010000000
VERSION     DATAVD010001536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1888
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1075076"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..760
                     /locus_tag="VHX39_29525"
     CDS             <1..760
                     /locus_tag="VHX39_29525"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3995334.1"
                     /translation="MTVHGVDLEVLRGGDGDPIVLVHGMSSLTTASRFPGLLAAHGSV
                     VAPSCPGFGASPRPKDFDTIYDLVHLLRAILDAIPGERVTLVGLSFGGWLAAELAAQG
                     HARLAGLVLVDPVGIKVSDRETADILDVFNRSPAEVRQAAWHDPDRFAPDFDAMEDSE
                     IVRHARDWDALCLYAWHPYMYNPQLARWLGRISVPTLVIWGDSDGIVSPDYGRAYAGL
                     IPGARFETIADCGHHPEVERPDELAALIGSFVKG"
     gene            764..>1888
                     /locus_tag="VHX39_29530"
     CDS             764..>1888
                     /locus_tag="VHX39_29530"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3995335.1"
                     /translation="MQLWFHNENTYPFVPQKILDEADSVRASLPGSLCDPRVAADLFH
                     QCMDESLLCDDLGINIVSIEHHAGINSLYGASPIVLGALARQTRKVRVLSQGTLISLR
                     KDPVRVAEEYATADVLLRGRLDIGFVKSGDSEMASSNANPVGNLERFWEAIDLITKAL
                     QNQDGPMRWEGKHFAHRHINLWPRPYQQPHPPMWTATGDPDTSRELGRRGMVNSVVLR
                     GIDGTKRAWSAYREAREAAGMSRPALDRFAYCGFVYVGDTDEEGVSVGTKLLWFLNTS
                     LKQAPQFSTFLPGRMPPEMAPGVYRTKPRPGEAPVARPADALRNMTADQAIQRQIMFA
                     GKPETVVRQIMAAYDTLGGFGHLIFIGRSGFLTHDEAEKSL"
BASE COUNT          334 a          544 c          597 g          413 t
ORIGIN      
        1 catgaccgtc cacggcgtcg accttgaagt tttgcgcggc ggcgacggtg acccgatcgt
       61 gctggtgcac ggcatgagca gcctgaccac agcgtctcga tttccgggcc tgctggccgc
      121 gcacggctcg gtggtggccc catcgtgtcc cgggttcggc gcctcgccga ggccaaagga
      181 cttcgacacg atctacgatc tcgtgcattt gttgcgcgcc atactggatg cgattcccgg
      241 cgaacgggtc acgctggttg gcctttcgtt tggcggttgg cttgctgccg agcttgcggc
      301 ccagggacat gctcgtttgg caggtttggt gttggtcgat ccggtgggca ttaaagtcag
      361 cgaccgcgaa actgccgaca ttctggatgt gttcaatcgt tcgccggctg aggtacggca
      421 ggccgcatgg catgatcccg atcgttttgc gcccgatttc gacgccatgg aggactccga
      481 gatcgtgcgc cacgcgcgcg actgggacgc actttgtctc tacgcgtggc atccttacat
      541 gtacaatccg cagcttgctc gctggttggg ccgcatcagt gttccgacac tggtcatatg
      601 gggcgacagc gacgggatcg tttcgccgga ttatggccgc gcctacgccg gtttgatccc
      661 gggtgcgcgg ttcgaaacga tcgccgattg cggacatcat ccggaggtcg agcggccaga
      721 cgagctggcc gccttgatcg gttcattcgt aaagggctga ccgatgcaac tctggtttca
      781 caacgaaaac acctacccat tcgttccgca aaagattctc gatgaggctg attcggtccg
      841 tgccagcctg cccggcagtt tgtgtgatcc gcgtgtcgct gccgatctgt ttcatcagtg
      901 tatggatgag tcgttgttgt gcgacgatct cggcatcaat atcgtctcga tcgaacatca
      961 tgccggcatc aacagtcttt atggtgcgag tccgatcgtg ctcggtgccc tggcacgaca
     1021 gacgcggaag gttcgcgtcc tgtcgcaggg cacgttgatt tcgctccgca aggacccggt
     1081 ccgcgtggct gaggagtacg ccaccgccga cgtgctgttg cgtggacggt tggatatcgg
     1141 tttcgtcaaa tccggcgaca gcgaaatggc ctcgagcaat gccaatccgg tgggcaatct
     1201 ggaacgcttc tgggaagcaa tcgacctgat caccaaggca ttgcagaatc aggacggtcc
     1261 gatgcgttgg gagggcaagc atttcgcaca ccgccacatc aatttgtggc cgcgtcccta
     1321 tcagcagccg catccgccga tgtggacggc caccggcgat cccgacacgt cacgcgaact
     1381 cgggcgccga gggatggtga attcggtggt gctgcgtggc attgatggaa caaagcgcgc
     1441 ctggtccgcg tatcgcgagg cacgtgaagc cgcggggatg tctcgacctg ccctcgatcg
     1501 tttcgcctat tgtggatttg tgtatgtcgg cgacaccgat gaggagggtg tttcggttgg
     1561 taccaaactg ctgtggttct taaacaccag cctgaagcag gcaccgcaat tctccacatt
     1621 tttgccgggc cggatgccgc cggagatggc gcctggcgtg tatcgcacaa agcctcggcc
     1681 cggtgaggcg cctgtggcgc gccctgcgga tgccttgcga aacatgacgg cggatcaggc
     1741 gatccagcgc cagatcatgt tcgccggcaa accggaaacc gtggtcaggc aaatcatggc
     1801 cgcttacgac acgcttggcg gattcgggca tttgatcttc atcggccgct caggctttct
     1861 gacacatgat gaggcggaga agagtctt
//
LOCUS       DATAVD010001537         4103 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1636125, whole genome shotgun sequence.
ACCESSION   DATAVD010001537 DATAVD010000000
VERSION     DATAVD010001537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4103
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1636125"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..449
                     /locus_tag="VHX39_29535"
     CDS             <1..449
                     /locus_tag="VHX39_29535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995336.1"
                     /translation="TGVLTVAGNPSLMRIDATTGISFAPSPNGLVAPKTWLILALSNG
                     AKATGGIDVFALDTIFSGAASSAQLSGSVGGFGGNAAAGEARIAPGSNSTFRINGCPI
                     SSVNCILLATEGIPTASPLDSFVIGSLFDPTDQDDLMLPLVSDEIY"
     gene            472..3036
                     /locus_tag="VHX39_29540"
     CDS             472..3036
                     /locus_tag="VHX39_29540"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing tetratricopeptide repeat
                     protein"
                     /protein_id="HEX3995337.1"
                     /translation="MSVLLVVAAGCQKPVSSDYWNGAARSSGSEGNFEKLMAQGTRAN
                     LSGRPQEAEARFRDALAEQRKQHGNDSPLVALPLMSLALQLSSMGQVPQADALFAETG
                     RVLASSKNPELQARLLLYRGVHKLNQKQPAEAEPLLASAQAAYIALVPADDLTRPPGP
                     PRLARNRFDINSVMQNGAETNLKLLGSDPAVQPELLGLIEVLRNRAVAMRDLGRPADA
                     DSLTKFAERVAAGNDLGRPSVYARVLRTAGITAADQSQQGRALADLGRSDNDFETALP
                     GTKPAAEAALIHAGELMQAGKTGAALSICKRAVRILVAIDAGTSPELMAPCLDAYASG
                     GLFGFGSDHADMFLAAQVAQGTITSHQIAQASASLAENARDPRIGAALHKRDELQREV
                     DRIYRALDTMGAAATAGRAEEQAAQLQAQADQTEAALAQAEAEVRTLSPNYGQLVQDV
                     VPASAVYAALRPGEAFVGLFLSKNSGWAFALRGGSMAIAKIDGGIGTVGPLVSAIRAG
                     IEKTEVNALPNFDIADARRLYDVTIGGVAAELKGASALVVAPTGPLLSLPFDVLLTGP
                     AEQDRLATAPWLVRQATITHVPAATNFVSLRKVANSSAAAKPWFGFGDFRPVSVAQAD
                     ASFPVGPCGDSGRLLAALPALPGAVKELAGARDVLKASGGDELTGEAFTVAKVLDTPL
                     KNYRILHFAAHALLPTDLRCQTEAAIVTSPLAGARDANGALLTASKVLGLDLDANLVI
                     LSACNSGGPGGGAGESLSGLARSFFFARARSLLVTHWEVSDQVAALLVVLTINDMQEK
                     PDQGVTGALREAQLSLLDRAASGKLPAEIAHPFFWAPFAVIGDGGEGGGRSVSSRL"
     gene            complement(3404..>4103)
                     /locus_tag="VHX39_29545"
     CDS             complement(3404..>4103)
                     /locus_tag="VHX39_29545"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX3995338.1"
                     /translation="LDQERAAEVVTRMGVEAKAAVPALVAVLGRSPDVPEKAVVEALG
                     SIGPDAGPAVPVLMRMLSEKPDIERQMTLIYALGEIGPASEAAVPLIVESLRDPRDDS
                     QFLNVNAADALGKIGPAAKSAVSALMVALNSDNGTGRLTTSATEALGNIGADAKTAIP
                     ALVETMVHQGLEYKKNQAEAIGQIAQALAARRDGTSLGPLRAALRAEEDAGLPLSTIA
                     PLREAVDYLATKRR"
BASE COUNT          682 a         1240 c         1417 g          764 t
ORIGIN      
        1 aaaccggcgt gctgaccgtg gcgggcaacc cgagtctcat gcggatcgac gccaccaccg
       61 gaatcagttt cgcgccatcg ccgaacggcc tggttgcacc gaagacatgg ttgatcctgg
      121 cgctgagcaa cggggcgaaa gccactggtg gaattgatgt gtttgcgttg gataccatct
      181 tcagcggcgc ggcttcgagc gcccagttga gcgggtcggt cggtggtttt ggaggcaatg
      241 cggcggcagg cgaggcgcgc attgcgccgg ggtccaattc gacgttccgg atcaatggct
      301 gtcccatttc ctccgtcaac tgcattctgc tggcaaccga gggcattccg accgcgagcc
      361 cactggacag tttcgtcatt ggctcgctgt tcgatccgac cgatcaggac gacctgatgc
      421 tgccgctggt ttcggacgag atttactgac gtgcgggcat ggtgggtcgc cgtgagcgtg
      481 ctgttggtcg tggcggccgg ctgccagaaa ccggtgtcct cggattactg gaacggcgca
      541 gcccggagca gcggttccga aggcaacttt gaaaaactga tggctcaggg cacgcgcgcc
      601 aatctgtccg ggcgtcctca ggaagccgag gcgcggttcc gtgacgcgct tgccgaacag
      661 cgcaagcaac atggtaacga cagtccgttg gtggcactgc cgctgatgtc gttggccttg
      721 caattgtcgt cgatgggtca ggttccgcag gccgacgcgc tgtttgccga aaccggacgc
      781 gtgctggcat cgtcgaaaaa tccggagctg caggctcgcc tgttgcttta ccgcggcgtg
      841 cataagttga accagaaaca gcccgccgaa gcggagccgc tgctggcctc ggctcaggcc
      901 gcttacatcg cactggtgcc tgccgacgac ctgacccgtc cgcctgggcc gccgcgactt
      961 gcgcgcaatc gtttcgatat caacagtgtc atgcaaaacg gtgcggagac gaatttaaaa
     1021 cttttgggca gcgatccggc ggtgcagccg gagttgctgg ggctgatcga ggtgcttcgc
     1081 aaccgggccg ttgcgatgcg cgatctcggc cggccggcgg atgccgacag cctcacgaag
     1141 tttgccgagc gggttgctgc aggtaacgac ctcgggcgtc ccagtgttta cgcccgcgtg
     1201 ctgcggaccg ccggcatcac cgcggccgat caatcccaac aaggccgcgc acttgccgat
     1261 ctgggccgtt ccgacaacga cttcgagacg gcgttgccgg gcaccaaacc ggctgccgaa
     1321 gcggcgctga tccatgccgg tgagttgatg caggccggca agaccggcgc cgccttgtcg
     1381 atctgcaagc gggcggtgcg gatattggtc gcgatcgacg ccggcacctc gccggagctg
     1441 atggcgccgt gtctggatgc ctatgcgagc ggcgggttgt tcgggttcgg ctccgatcat
     1501 gcggacatgt tcctggcggc gcaggtggcg cagggcacca tcaccagcca tcagattgcc
     1561 caggccagtg cgtcgcttgc ggaaaacgcc cgcgacccgc ggattggcgc ggcactccac
     1621 aagcgcgatg agctgcaacg cgaggtcgac cggatttacc gcgcgctgga cacgatggga
     1681 gcggccgcca cagccggccg ggccgaggaa caggccgctc agttgcaggc gcaggccgat
     1741 cagaccgagg cggcgttggc tcaggccgag gccgaggtgc gcacgttgtc gccgaactac
     1801 ggccaattgg tgcaggacgt ggtgccggcg agcgcggtgt acgccgcgtt acggcccgga
     1861 gaggcattcg ttggattatt tctgagcaag aacagcgggt gggcgttcgc actccgcggc
     1921 ggcagcatgg cgattgcgaa gatcgacggc ggcatcggca cggttggccc tctggtgagc
     1981 gcgatccggg ccggcattga gaaaaccgag gtcaacgctt tgccgaactt cgacattgcc
     2041 gacgcgcggc ggctgtacga cgtgacaatt ggcggggtgg cagcggaact gaagggtgcg
     2101 tcggccttgg tggtggcgcc gaccgggccg ctgctgtcgt taccgtttga cgtgttgctg
     2161 actggcccag cggagcagga caggctggcg acggcgccct ggctggtgcg gcaggcgacg
     2221 atcacccatg tgccggcggc gaccaatttt gtcagcttgc gcaaggtcgc gaattcctcg
     2281 gcggcggcca aaccatggtt cggctttggc gacttccgac cagtcagcgt ggcgcaggcc
     2341 gacgccagct tcccggttgg gccgtgcggc gacagtggcc gtttgctggc agcgctaccc
     2401 gctctgccgg gcgcggtaaa ggaactggcc ggggcgcgtg acgtgctcaa agcctcgggc
     2461 ggcgacgaac tgacgggtga ggctttcacg gttgcaaaag tgttggatac gccgttgaaa
     2521 aactatcgga ttttgcactt tgccgcgcat gccctgctgc cgaccgatct gcggtgccag
     2581 acagaggcag cgatcgtgac gtctccgctg gccggggcgc gggacgccaa tggcgcgttg
     2641 ctgacggcat cgaaagtact gggtctggat ctggacgcca acctcgtgat cctgtcagcg
     2701 tgcaactcgg gcgggccggg tggtggcgcg ggtgaaagcc tgtccggtct ggctcggtcg
     2761 tttttctttg ccagggcacg ctcgttgctg gtgacgcact gggaggtgag cgaccaggtc
     2821 gcggccctgc tggtggtgct gacgatcaac gacatgcagg agaagccgga ccagggcgtg
     2881 accggagcgc tgcgagaggc gcaattgagt ttgctcgacc gggctgcgag cgggaaactg
     2941 ccggcggaaa tcgcgcatcc attcttttgg gcgccgttcg cggtgatcgg cgatggcggg
     3001 gaggggggtg gccggagcgt atcgtccagg ctgtaggggc gagtctttcg ggcggcgatc
     3061 tgagctgtct ggtcgtgagg gcggaaagct gccgacctcc ggtttccggc gccacaggtg
     3121 cgcctggttt gtctgtccag cgtcgcgtgc tgccagtact tccgcgtagg ggttttgaca
     3181 ggtcaggttg ttggccggct catgcgacag ccgtgcggcc agtctgggcc gctgcgaaag
     3241 agtgacttcg gtcccttgct ggtcgttacc tggccactcg gccgacctcc gaagcagacg
     3301 tttaccgccc cgttgcgctg gcagaaatgc gcccatcgcg gccatccgtg atccgaaggc
     3361 gccgccccaa aagcgcgtgt gggcggccat tttgccggcg acactaacgt cgcttggtcg
     3421 cgaggtaatc caccgcctcg cgcaaaggcg caatcgtcga gagcggcaga ccggcatcct
     3481 cctcggcacg gagtgcggcc cgcagggggc cgagcgaggt tccgtccctg cgagcagcga
     3541 gcgcctgcgc gatttgacca atcgcctccg cctggttctt tttgtactct aaaccttggt
     3601 ggaccatcgt ttcgacaagc gcaggaatcg cagtctttgc gtccgcgcca atattgccga
     3661 gggcttcggt cgcgctggta gtcagcctgc cggtaccatt gtcggaattg agtgcaacca
     3721 tcagagcgga taccgccgat tttgcagcgg gtccgatctt accgagcgcg tctgcggcgt
     3781 tcacgttcag aaactgtgaa tcgtcgcgcg ggtcacggag tgactctacg atcagcggga
     3841 cggcggcctc tgatgccgga ccgatctcgc caagcgcgta aatgagtgtc atttgccgct
     3901 cgatgtcggg cttctcgctc aacatccgca taaggactgg gacggcagga ccggcatcag
     3961 gtccaatgct gcccaaggcc tccacaacag ccttctcagg gacgtcgggc gatcggccca
     4021 gcaccgctac cagcgccggc accgccgctt tagcttcgac gcccatccgt gtcacaacct
     4081 cggcagcacg ctcctggtcc aag
//
LOCUS       DATAVD010001538         2881 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1075144, whole genome shotgun sequence.
ACCESSION   DATAVD010001538 DATAVD010000000
VERSION     DATAVD010001538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2881
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1075144"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1098
                     /locus_tag="VHX39_29550"
     CDS             <1..1098
                     /locus_tag="VHX39_29550"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3995339.1"
                     /translation="RAVAEVVDSPEGVLFVRAPEDVAFQWAGSLNTPAVTAPIPPGHP
                     LVPAFADGDRIAVLEELPDAIAWFEEIPRAWLAVPLNHFGNLIGFVVLGRSRAPFKLD
                     REVFQLLRVVGREVASRVAEQRAAQILSQTRELRDYSQRFAFVLHDIKNVSGQLSMLL
                     ANAEVYADNPEFQRDMLATVRASVGKIARLLSRLQADRQERSHALLDPMERLKEIVAT
                     RLNVRTAGVATVRLGPGTIQSVHPGGVAIDAEAFDAVAAHLLDNAIEASPPDASVLVD
                     VRREALSTVIDITDAGPGMTPEFIRDELFRPFASTRRDGHGIGAYQARELLREAGGDL
                     LVLSRVGSGTTMRLLLPLVRAAAADTPQYAA"
     gene            1111..2529
                     /gene="prsR"
                     /locus_tag="VHX39_29555"
     CDS             1111..2529
                     /gene="prsR"
                     /locus_tag="VHX39_29555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045893 - positive regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-CTERM-box response regulator transcription
                     factor"
                     /protein_id="HEX3995340.1"
                     /translation="MAKPRLLIVEDDEGLCSQYRWAFPSCDVLLSHTRQQAIALMKRD
                     SPPVAIIDLGLPPDPDGVSEGIATIEDMLRIAPRTKIVVATGNGARKHALKAVSLGAY
                     DFCEKTVEIEVLRTIVDRGLNLHRLEEENRRLASVPARSPIERIVTASVAMLKVCRDV
                     EKLATTNVPVLLLGESGTGKEALAAALHELGPRARHPFVAINCGAIPENLLESELFGH
                     ERGAFTGAVKQTIGKIESANKGTLFLDEIGDLPHPLQVKLLRFLQDQIVERIGGRQKI
                     QVDVRVVSATNADLVAKVALGSFRGDLFYRMNAVTVRIPPLRERDGDVMLLANFFLNR
                     FNQEFVRNMRGFTEAATMALDAHDWPGNVRELENRMKRAVVMAEGRMIDASDLELTPA
                     EAAVPDLDLRAARLRAERGVLLAALARSNNTLVTAARLLGVSRPTLYGLMEVHGIEIE
                     GMKSLAATADTGTARADAAKSE"
     gene            2697..>2881
                     /locus_tag="VHX39_29560"
     CDS             2697..>2881
                     /locus_tag="VHX39_29560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995341.1"
                     /translation="MAATLTTVALCLALIGAPSAAHADYVSNARDSLKKGDLKSAQID
                     LRNAVRGDPQNAEAHYLL"
BASE COUNT          507 a          874 c          970 g          530 t
ORIGIN      
        1 cgcgcggtcg ccgaggtggt ggacagccca gagggggtgt tgtttgtgcg ggcgccggag
       61 gatgtggcgt tccagtgggc gggctcgctc aacacgccgg cggtgaccgc gccgatccca
      121 cccggccatc cgttggtgcc cgcgttcgcc gatggcgatc gcattgcggt gcttgaggaa
      181 ctgcccgacg cgattgcctg gttcgaggaa attccgcgtg cctggctcgc cgtgccgctg
      241 aaccatttcg gcaatctgat cggctttgtc gtgctcggcc gctcgcgtgc gccattcaag
      301 ctggaccgcg aggtattcca gttgctgcgc gtcgtgggac gcgaggtcgc cagccgggtg
      361 gccgaacagc gcgccgcgca gatcctgtca cagacccgcg agctgcgcga ttacagccag
      421 cgctttgcgt ttgtcctgca tgacatcaag aacgtttccg ggcagctgtc gatgctgctc
      481 gccaatgccg aggtctacgc cgacaatccc gaattccagc gcgacatgct ggccaccgtg
      541 cgggcctcgg tgggtaagat tgcgcggtta ttgtcgcggc tgcaggccga ccggcaggag
      601 cgcagccacg ctttgctcga tccgatggag cggctgaagg aaattgtcgc aacgaggttg
      661 aacgtccgca ctgccggcgt cgcgactgtc cgccttggac ctggcacaat ccagtccgta
      721 catcccgggg gtgtggcgat cgacgccgag gcgttcgacg cggttgccgc gcatctgctg
      781 gacaatgcga tcgaggcctc tccacccgat gcgtccgtgc tcgtcgacgt ccggcgggag
      841 gcgctgagca cggttatcga cattaccgac gccggaccgg gcatgacccc tgaattcatt
      901 cgcgacgaat tgttccgccc gtttgcgtcc accaggcgcg acgggcacgg catcggcgcg
      961 tatcaggccc gggaattgct gcgtgaggcg ggcggcgatc ttctcgtgct aagccgggtg
     1021 ggatcgggta caaccatgcg gttgctgctg cccctggtgc gggccgcggc cgccgacacg
     1081 ccgcagtacg cggcctgaac ggatcaggcg atggccaaac ccaggttgct gatcgttgaa
     1141 gacgacgaag gcctgtgctc ccagtaccgt tgggctttcc cttcctgcga cgtgctgttg
     1201 tcgcacactc gccagcaggc gatcgccctg atgaagcgcg acagtcctcc ggttgcgatc
     1261 atcgacctcg ggttgccacc cgaccctgac ggcgtcagcg aagggattgc gaccatcgag
     1321 gacatgttgc ggatcgcgcc aagaaccaaa attgtcgtcg ccaccggcaa tggcgcccgc
     1381 aagcacgccc tcaaggcggt ttccctgggt gcctacgatt tttgcgagaa gaccgtcgaa
     1441 atcgaggtgc tgcgcacgat cgtcgaccgt ggcctcaatc tgcaccggct cgaggaggaa
     1501 aatcgccgcc tcgccagcgt gccggcccgc tcgcccatcg agcggatcgt gaccgccagc
     1561 gtggcgatgc tgaaggtctg ccgggacgtg gaaaaactcg ccacgaccaa cgtgccggta
     1621 ctgcttctgg gcgaaagcgg caccgggaag gaggcgttgg cggcggctct gcatgaactt
     1681 ggtccgcgcg cacggcaccc gtttgtcgcg atcaactgcg gtgcaattcc ggagaatttg
     1741 ctggagagcg aactgttcgg ccacgagcgc ggcgctttta ccggcgcggt gaagcagacc
     1801 atcggcaaga tcgagagtgc caataagggc accttgttcc tggatgagat cggcgatctg
     1861 ccgcatccgc tgcaggttaa gctgctgcgg tttttgcagg accagattgt cgagcgcatt
     1921 ggcgggcggc agaagattca ggtcgatgtg cgggtggttt cggcaaccaa cgccgacctc
     1981 gttgcaaagg tcgccctggg cagttttcgc ggggatttgt tttaccggat gaacgcggtg
     2041 acggtgcgga tcccgccgct gcgggaacgc gatggcgacg tgatgctgtt ggcaaatttc
     2101 ttcctcaacc gcttcaatca ggaattcgtc cgcaatatgc gcggctttac cgaagccgcg
     2161 accatggcat tggatgcgca tgattggccg ggcaatgtcc gcgaactgga aaaccgcatg
     2221 aaacgtgcgg tggtgatggc cgagggccgg atgatcgatg cctccgatct cgaactcacg
     2281 cctgccgagg cggcggtgcc ggatctggat ctccgtgccg cccggttgcg ggccgagcgg
     2341 ggggtattgt tggcggccct ggcacgcagc aacaacacgc tggtgacggc ggcacgactg
     2401 ctcggggtca gccggccaac gttatacggt ctcatggaag tgcatgggat tgagatcgaa
     2461 gggatgaaat ccctcgccgc gacagcggac accgggacgg ccagagccga cgccgcaaaa
     2521 tccgaatgaa aatgaggaaa cgggccatgc agttgttcgt cgcaggcgag cagtcgtacg
     2581 tcagggccag gcggccgttc gtcgaggcag ggctggtccc ggccgtgacg aggggcagca
     2641 ccagggcggc cggcgatgca accggttgga tcggatgtcg gagcccgtcc actcggttgg
     2701 ccgccactct gaccacggtc gcgctgtgtc tggcgctgat cggcgcgcca tcggcagcac
     2761 atgccgacta tgtttccaat gcccgcgatt cgttgaaaaa gggcgatctg aaatcagcac
     2821 agatcgacct gcgcaacgcc gttcgcggcg atccacaaaa tgccgaagcg cactatttgc
     2881 t
//
LOCUS       DATAVD010001539         4468 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1636262, whole genome shotgun sequence.
ACCESSION   DATAVD010001539 DATAVD010000000
VERSION     DATAVD010001539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4468
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1636262"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..326)
                     /locus_tag="VHX39_29565"
     CDS             complement(<1..326)
                     /locus_tag="VHX39_29565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995342.1"
                     /translation="MLLKVANLLIARHGFHHRHTLRAGRPTQIMLDPANSCQLQCPGC
                     VHRPTAKGKVPDPSGERSSFDWPKGMMETAVFDQIMSDQGTFAFASILYNYGEPLLHR
                     QFPAMVR"
     gene            667..1446
                     /locus_tag="VHX39_29570"
     CDS             667..1446
                     /locus_tag="VHX39_29570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010510987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX3995343.1"
                     /translation="MSSVDLRFMFSGFFVGLLIGQTGMGGGALMTPILVLFFGIHPAT
                     AVGTDLLYASATKTAGTLVHGFNRTVDWRIVARLAGGSVPATAITLAAISHFDMTGPT
                     SGRIIGLVLGVMLLLTALSLVFRRQFLRLVGPTLESISAQQAARLTIIVGVVLGALVT
                     ISSVGAGALGVTALLMLYPRVPMAVIVGSDIAHAVPLTLVAGVGHWWLGSVDWPLLTS
                     LLTGSIPGIVLGSYLSAHIPDTVLRPILAGTLIVVGGRLVF"
     gene            1773..2060
                     /locus_tag="VHX39_29575"
     CDS             1773..2060
                     /locus_tag="VHX39_29575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995344.1"
                     /translation="MPVVEEIRTVTADGRLIVPWVIQRALGLDHGGPVRFHVENGIVT
                     LVAVEVKPAEAPRTEAGSGRNRAAIRAELAAELKTLMDVAERDRSLAEAAD"
     gene            2086..2502
                     /locus_tag="VHX39_29580"
     CDS             2086..2502
                     /locus_tag="VHX39_29580"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3995345.1"
                     /translation="MPRTSHILETSLYVDDLPGAVAFYRDLFDFELFFAEHRMAALGV
                     PGGQVLLLFQRGATLEPAPGPGGGFIPPHHGEGNLHLCFAIPFGELAAWEAHLRDRGI
                     TVESRLHWARGGTSLYFRDPEGNSIEVATPGLWPNA"
     gene            2745..2867
                     /locus_tag="VHX39_29585"
     CDS             2745..2867
                     /locus_tag="VHX39_29585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995346.1"
                     /translation="MTNTAIQREKNMKHWPRVWKLNLIAARNPLWEDLFNQLNV"
     gene            3048..3812
                     /locus_tag="VHX39_29590"
     CDS             3048..3812
                     /locus_tag="VHX39_29590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3995347.1"
                     /translation="MPLPRTPSLRLDGRRALVTGAGRGIGLAAAAALAQAGAHVVLAA
                     RTEAEIAAASADIRAEGGTAEPLVLDVTDTVSVRSTIMALPAFDILVNNAGTNRPRPF
                     LDVTEDDYDTITTLNQRAAFFAAQSVARRMAEAGVKGSIIHMSSQMGHVGGQRRTVYC
                     MTKHGIEGLTKAMAIDLAPLGIRVNSIGPTFIDTPLTRPFWNDKAFHDDVISRIKLGR
                     LGTVEDLMGAVVFLASDAAALITGTALVVDGGWTAE"
     gene            3819..>4468
                     /locus_tag="VHX39_29595"
     CDS             3819..>4468
                     /locus_tag="VHX39_29595"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEX3995348.1"
                     /translation="MIQILKRGASEAEKTEADRKVRQTVEAILDDIAARGDVAVRELS
                     AKFDKWEPASFRLSDGEIRDLIATLPDQVIEDIKFAQAQIRRFAEAQKAALRDIEVET
                     LPGIRLGHKNIPVSSVGCYVPGGRYPMVASAHMSVLTAKVAGVPRVAACTPPLNGVPP
                     AATVAAMSLAGADEIYLLGGIQAVAMMALGTGSVPPVDMLVGPGNAFVAEAKRQLFG"
BASE COUNT          763 a         1353 c         1471 g          881 t
ORIGIN      
        1 cggaccatcg ctggaaactg cctgtgcagc aacggctcgc cgtaattgta caggatcgag
       61 gcaaaggcga acgtcccctg atcggacatg atctggtcga ataccgccgt ctccatcatg
      121 cccttcggcc aatcgaacga cgatcgttcg ccgctcggat ccggcacctt gccttttgcc
      181 gttggacggt ggacacatcc tgggcattgc aactgacagg agttcgcagg atcgagcatg
      241 atctgggtcg gccgtccggc ccgaagcgtg tggcggtggt gaaaaccgtg gcgggcaatc
      301 agcagattgg cgactttgag cagcatcagt ttgggtcggg ctgacggtca ggatggatgg
      361 cgtcccggtt atgatgagag gcgtcatcac ggcagctccc ctttgccggt tattgcaacc
      421 cccggctgta ccgtggcggc tatctacaac cgaacatcgg ccgctccaat gtctttcctg
      481 ggcacgtcgg agccggcacg ttggtgcggc ggtcatgggc caatgcaacc taccattacg
      541 gcatggctgc tttgggttgc accaatcatg ctgtaaaacc acgttgggtc agagcgagat
      601 ccggccagca gcctcacacg cctgatcact gtgccgccga tgccggggtg aatccacgtg
      661 gatctgatgt cttccgttga cctgcgcttc atgttctcgg gatttttcgt gggtttgctg
      721 atcgggcaga ccgggatggg tggcggcgca ctgatgaccc cgatcctggt gctgtttttc
      781 ggcattcacc cggccaccgc ggttggcacc gacctgctgt atgcgtccgc cacgaagacg
      841 gccgggacgc tggtgcacgg gttcaatcgc acggtcgact ggcggatcgt ggcacggctg
      901 gccggcggca gcgtgccggc gacggcgatc accttggcgg caatctcgca cttcgacatg
      961 accggcccga cgagtggccg gatcatcggc ctcgtgctcg gggtcatgct gttgctgacc
     1021 gcactgtcgt tggttttccg ccgccagttt ctccggctgg tcgggccgac gctggagtcc
     1081 atctcggcgc aacaggcggc gcggctcacg atcatcgttg gggtagtact gggcgcgctg
     1141 gtgacgattt cctcagtcgg agccggcgcg ctgggggtca cggcattgct gatgctgtat
     1201 ccgcgcgtgc cgatggcggt catcgtcggt tccgacatcg cgcatgcggt gccgctgaca
     1261 ttggtcgccg gagtgggcca ttggtggctg ggctcggtgg actggccgct gctgacgtcg
     1321 ctgcttaccg ggtccattcc ggggatcgta cttggcagtt acctgtcggc gcatatcccg
     1381 gacacggtgc tgcggccgat ccttgcgggg acactgattg tggtcggtgg acggctggtg
     1441 ttctgagggt gcgccgaaca attgtttcgg aaacactccg tcctggcctg gatgtaagcg
     1501 ccgcgggttt ccactgagcc gaaggtgcaa acggttacat cgacattacg gcgaacttgc
     1561 tcgcgcacct gggtgtgtgg tatacatgaa tccgctgtaa ggtttgcctg gtcgcctttc
     1621 aggtgggtca tccagccggt accgatcgat taaaaatggc ttcgctcccg catgacagcc
     1681 cagggagttg gtcagggcgt tggttgcgga cgacggtggg tttttgcgcc gggtggcgcg
     1741 cttccgatgg ttttcagcac aaggaattcc gcatgccggt cgtcgaggaa atccgcaccg
     1801 ttacggccga cggccggctt atcgttccct gggtaatcca gcgcgctttg ggcctggacc
     1861 atggcgggcc ggtcaggttc cacgtcgaaa atggcattgt caccttggtc gcggtggagg
     1921 tgaaaccggc tgaagcgcct cggactgagg cgggcagtgg acggaaccgg gccgcaattc
     1981 gcgccgaact ggcggctgaa ttgaagacgt tgatggacgt cgccgaacgg gatcgctcct
     2041 tggcggaagc cgccgactag gcccttgggc cgggagcggc tcgccatgcc tcgtaccagc
     2101 catatcctgg agacctcgct ttacgtcgac gacctgcctg gtgcggtcgc cttctatcgc
     2161 gaccttttcg acttcgagtt gttctttgcc gaacaccgca tggcggctct gggcgtgccc
     2221 ggcggtcagg ttctgttgct gttccaacgc ggtgccacgc tggagccggc gcctggtccg
     2281 ggtggcgggt tcattccgcc ccatcacggt gaaggcaatc tgcatctgtg cttcgccatc
     2341 ccgtttgggg aactggcggc gtgggaagca cacctgcggg atcgcggcat taccgtcgaa
     2401 agccggctgc actgggcgcg cggcgggacg agcctgtact tccgcgatcc ggaggggaac
     2461 tcgatcgagg ttgcgacacc agggctgtgg ccgaacgcgt aaagtggcgg tcggtcctct
     2521 cttcgacctc atccccgccc ccgtcgtcat ccccggcccc gtcgtcatcc acgggcttgt
     2581 cccgtggacc aatcgccgca tgcggcctgg tcccgccaga ccgagtaaac tcgacagcga
     2641 gcgccaaccg ttggttcgtc cgcccggcgc gcttgcagcc ctgccacaca ttcttaacca
     2701 gacgcgcaga ttatgccggg atgaagggcg gccgggtgta catcatgacc aacactgcga
     2761 tccaacggga gaaaaacatg aagcattggc cgcgggtatg gaaactgaac ctcatcgccg
     2821 cacggaaccc gctatgggag gatttgttca atcagttgaa cgtgtgatgt agctggcgcc
     2881 gtgccgcgac cgttccccgt gacgagcacg gggatgacgt ggggggcgga gcacggggca
     2941 gccagagcat cgcagccatt cccgaacgtc agccgcgtag ccggccgcat cttcccgccg
     3001 tggcggtaac gcgataccca ggtccctctt tgttggaacc accccgcatg cctcttcctc
     3061 gcacgccctc cctccggctt gacggtcgcc gcgcgctggt gaccggggcg ggccgcggca
     3121 ttggcctggc cgccgccgcc gctttggcgc aggccggcgc gcatgtcgtg ctcgcggcgc
     3181 gcaccgaggc tgagattgcc gccgcctccg ccgacatccg agccgagggt gggactgccg
     3241 aaccgttggt gctcgatgtt accgatacgg tgtcggttcg ttccactatc atggcgctgc
     3301 cggctttcga catcctggtg aacaacgccg gcaccaaccg gccgcggccg ttcctcgacg
     3361 tgaccgagga cgattacgac accatcacga ccctgaacca gcgagcggcg tttttcgcag
     3421 cccagtcggt ggcgcgaagg atggcggaag cgggagtaaa gggctcgatc attcatatgt
     3481 cgtcacaaat gggccatgtc ggcggtcagc ggcgtaccgt ctattgcatg accaaacacg
     3541 gcatcgaggg tctgaccaaa gccatggcaa tcgacctcgc gcctttgggc atcagggtga
     3601 actcgatcgg cccaacgttt atcgatacgc cgttgacccg tcccttctgg aacgacaaag
     3661 ccttccacga cgacgtcatc agccgcatca aactgggccg cctcggcacg gtggaggacc
     3721 tgatgggcgc cgtggtgttc ctggcatcgg atgcggcagc gctgatcacc gggactgcgt
     3781 tggtagtaga tggcggctgg acggcggagt aacgaattat gatccaaatc ctgaaacgcg
     3841 gcgcgagcga agcggaaaag accgaggccg accgtaaggt ccgtcaaacc gttgaagcaa
     3901 tcctcgacga catcgcagcg cgcggcgacg tagcggtgcg cgagttgtcg gcaaagttcg
     3961 acaaatggga acccgcttcg ttccgcctga gcgacggaga aatccgcgac ctgatcgcca
     4021 ccctgccgga ccaggtgatc gaggacatta aattcgcgca agcccagatc cgccggtttg
     4081 ccgaagcgca aaaggccgca ttgcgcgata tcgaggtcga aacgttgccg gggatcaggc
     4141 ttggccacaa gaacattccg gtctccagcg tcggatgtta cgtgcctggc ggacgttacc
     4201 cgatggtcgc atcggcacat atgtcggtgc tgacagccaa ggttgcggga gtgcctcggg
     4261 tggctgcgtg cacgccgcct ttgaacggag tgccgcctgc cgccacggtg gccgcaatgt
     4321 cgctggccgg agcggacgag atctatctgc ttggcggcat ccaggcggtg gcgatgatgg
     4381 cactcggcac cggttcggtc ccgccggtgg acatgctggt cggcccagga aatgcgtttg
     4441 tagcagaagc gaaacggcaa ttgttcgg
//
LOCUS       DATAVD010001540         1572 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3496281, whole genome shotgun sequence.
ACCESSION   DATAVD010001540 DATAVD010000000
VERSION     DATAVD010001540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1572
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3496281"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(181..1077)
                     /locus_tag="VHX39_29600"
     CDS             complement(181..1077)
                     /locus_tag="VHX39_29600"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional helix-turn-helix domain-containing
                     protein/methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEX3995349.1"
                     /translation="MMNLAINDHRLTKPGPQDAALRDYDSVRRAIAFISEHWRAQPTI
                     EAMADAASVTPDELHHLFRRWAGLTPKAFMQALTLDHAKGLLRDSASVLDAALDSGLS
                     GPGRLHDLFVTHEAMSPGEWKNGGAGMTLRYGFHPSPFGTAIVIASGRGLAGLAFADP
                     GAEQTSFADMKRRWPNATYVEDHEGTAPLAQRIFDTKMWRADQPLRVVLIGTDFEVRV
                     WETLLKIPMGRAVCYSDIATNIRNPKASRAVGAAVGRNPLSFVVPCHRALGKGGALTG
                     YHWGITRKQAMLGWEAGQVGLH"
     gene            complement(1134..>1572)
                     /locus_tag="VHX39_29605"
     CDS             complement(1134..>1572)
                     /locus_tag="VHX39_29605"
                     /inference="COORDINATES: protein motif:HMM:NF021517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2244 domain-containing protein"
                     /protein_id="HEX3995350.1"
                     /translation="RTQFTVLMTVVCVISFAAGVVFWRMGAWPVFGFFGLDVLLIYWA
                     FRVNFRRGKATEEISVTPSELRVRRVSHRGHVVEWVLNPLWVQLDQKTHAEFGIEKLY
                     LVSRGRRVSIASFLGPDEKASFAKALLAALQSAKRGPTYNPVV"
BASE COUNT          295 a          502 c          490 g          285 t
ORIGIN      
        1 ggcgttcccg tgatctaccg gctcaatgcg gacgcgacgg tggcctcgaa gcttgatatg
       61 gcggcgtaaa cggaattctt gtttcgtcgg gtgggttagc gaagaacgta acccaccatc
      121 tttcggtcgg ccaagaatga tgggttacgg cttcgcctaa cccccatagt ccgcattccg
      181 tcagtgcaac cccacctgtc ccgcttccca gcccagcatc gcctgcttgc gggtgatgcc
      241 ccagtgatag ccggtcaggg cgccaccttt gccgagcgcg cgatggcagg gcaccacgaa
      301 cgacaacggg tttcgtccga ccgcggcacc gaccgcgcgg gaggccttcg gattgcggat
      361 gttggtcgcg atatcggaat agcacaccgc gcggcccatc gggatcttca gcagcgtctc
      421 ccagacccgg acctcgaaat cagtcccgat cagcaccacg cgcaacggct ggtccgcacg
      481 ccacatcttg gtatcgaaga ttcgctgcgc cagcggcgcc gtgccctcgt ggtcttcgac
      541 ataggttgca ttgggccagc gccgcttcat gtcggcgaac gaggtctgct cggcgccggg
      601 atcggcgaag gcaagcccag ccagtccgcg gccgctggcg atcacgatcg cggtgccgaa
      661 cggcgagggg tggaagccgt aacgcaaggt catgccggcg ccgccgttct tccattcgcc
      721 cggcgacatc gcctcatggg tgacgaacag gtcgtgcagc cgtcccgggc ccgacagtcc
      781 ggaatccagt gcggcatcga gcacgctggc ggaatcgcgc aacaggccct tggcgtgatc
      841 gagcgtcaat gcctgcatga aggccttcgg ggtcagcccg gcccagcgcc ggaatagatg
      901 gtgcaattcg tcaggtgtta cggatgccgc atccgccatc gcttcgatgg tgggctgcgc
      961 ccgccagtgt tccgaaatga atgcgatggc gcgccgtacc gaatcgtagt cgcgaagtgc
     1021 cgcgtcctgc gggccgggct tggtgaggcg gtggtcgttg attgcaaggt tcatcatgct
     1081 gcctgatgta ggacctgtgc gggccccaaa ccacccgatt tccgaatagc cgtttacacg
     1141 actggattat aggtcgggcc acgtttggcg gattgcaggg cggctaataa ggctttggca
     1201 aagcttgcct tttcgtccgg tcccagaaaa ctcgcgatgg aaacccggcg tcccctcgag
     1261 accaggtaaa gcttctcgat accgaattcg gcgtgggtct tctggtcgag ctgtacccac
     1321 agcggattga gcacccattc gacgacatgg ccgcggtggc tgacccgccg cacccgcaat
     1381 tctgatggcg tcaccgagat ttcctcggtg gccttgccgc ggcggaaatt gacccggaac
     1441 gcccaataga tcaggagcac gtcgaggccg aaaaagccga acaccggcca cgcccccatc
     1501 cgccagaaca ccacgccggc ggcgaaactg atcacgcaga caaccgtcat cagcaccgtg
     1561 aattgcgtgc gg
//
LOCUS       DATAVD010001541         1946 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2007907, whole genome shotgun sequence.
ACCESSION   DATAVD010001541 DATAVD010000000
VERSION     DATAVD010001541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1946)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1946)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1946
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2007907"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(128..1366)
                     /locus_tag="VHX39_29610"
     CDS             complement(128..1366)
                     /locus_tag="VHX39_29610"
                     /inference="COORDINATES: protein motif:HMM:NF017617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic anion resistance protein"
                     /protein_id="HEX3995351.1"
                     /translation="MSETRPEVPLDLSMFDDPKPEPSVSQAVAIAAPTAVTDPRLQPE
                     PAPPRLVEIAKLSPDDLAESQKSAERVDFRVTTSLLAHGDGALAKIAQSSRQLLTGVR
                     LGDAGEVGTIAAAVIDGVKILRIQDLQAESAGGQPAARKGLIGRLLGSVADAHTAFKG
                     FTENRKTFLQLMDGEQAKARKTKADLAVAIELLDQQAVAIRDSLHLLKIDIAGGQIAL
                     DRGQDELEALRQNAVHTGDPADAADVMEFRSAIANFRGKIAEMRENLVGSALLIPIIG
                     QNKKAAETRLMKISNGMLVVIPRLMAVASQAVVQVDIRRAAEESERLDEAARQITQLA
                     SKGAHDAATSAARSLGGDQRNIDVLAQVADEAIQTMHEVIEIEREVAAGDREREAKLA
                     AIRDKLVTGMRGVNQHAIQP"
     gene            1643..>1946
                     /locus_tag="VHX39_29615"
     CDS             1643..>1946
                     /locus_tag="VHX39_29615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3995352.1"
                     /translation="MMELNADFSQRVAVHAARIPWVPSPIAGVDRRMLDRIGDEVARA
                     TSIVRYAPGSHFSPHTHGGGEELLVLEGEFSDEFGDFPAGSYVRNPPTSCHEPKSKP"
BASE COUNT          342 a          612 c          614 g          378 t
ORIGIN      
        1 tcatggactg tgacctgatc gggcaacgcc tccttcaatc gccgggcgaa ggcggtcaaa
       61 ttgctttcgg cgtcggagcg gaagcgcctt agccaggcag cctgccgatc gaagtcgata
      121 tcgccactca tggttgaatg gcgtgctggt tcaccccgcg catgccggtg accagcttgt
      181 cgcggatcgc ggcgagtttg gcttcgcgct cgcggtcacc ggcggccact tcgcgttcga
      241 tttcgatgac ctcatgcatg gtctggatcg cctcatcggc gacctgtgcc aacacgtcga
      301 tattgcgttg atcgccgccc agtgatcgcg cggctgaggt ggcggcgtca tgagcgcctt
      361 tgctggccag ttgggtgatc tggcgggctg cctcatccag ccgttcgctt tcctcggcgg
      421 cgcgacggat atcgacctgc accacggctt gcgacgccac cgccatcagc cgagggatta
      481 ccaccagcat gccgttggag atcttcatca gccgggtttc ggcggctttt ttgttctggc
      541 cgataatcgg gatcagcaaa gcggagccga ccaggttctc ccgcatttcg gcgatcttgc
      601 cgcggaaatt ggcaatcgcg ctccggaatt ccatgacgtc agcggcatcg gccgggtcac
      661 cggtgtgcac cgcattctga cgcaaagctt ccaattcgtc ctggccgcga tccaacgcga
      721 tctgaccacc ggcgatgtcg attttcagca ggtgcaggct gtcacggatg gcaacggcct
      781 gctggtccag caactcgatc gcaaccgcca gatcggcctt ggttttgcgc gctttggcct
      841 gctcaccgtc catcagttgc aggaaggtct tgcggttctc ggtaaagccc ttgaacgccg
      901 tgtgggcgtc ggccaccgaa cccagaagcc ggccgatcag acccttgcgt gccgctggct
      961 ggccaccggc cgactctgcc tgcaggtcct gaatacggag gatcttcacg ccatcgatca
     1021 ccgcggcggc aatagtacca acctcgccgg cgtcgcccag tcgcacgccg gtcaacagtt
     1081 ggcgggagga ttgcgcaatc ttggcgagag cgccgtcgcc atgtgcaagc agcgaggtcg
     1141 tgacccggaa atccacccgc tccgccgact tctgggattc ggcaaggtca tccgggctga
     1201 gcttggcaat ttccaccagc cgtggcggcg cgggctccgg ctgaagtctg ggatcggtca
     1261 ccgcggtcgg tgcggcgatg gccacagcct gggagacaga cggttcgggc ttcggatcat
     1321 cgaacattga cagatcgagc ggcacttccg gcctggtctc ggacatctga actcgctcca
     1381 caacagaggg cctcaccata ccggaaccaa ctactcccgg aatatcgaat tcatccggaa
     1441 tgggcagttg actgccgcga ccatggcgag agacgaattg caacagcgtc acaatcgtgg
     1501 ctgatatccg ggcgctgatt gtggcggcgg cgggcagatg gggcgagcag gcggtgcgcc
     1561 acaggcgctc tggaacaccg gagagcccgg gtggacccat gaggtcaaat tgtcacacaa
     1621 tggtcatgcc ggacggaggt cgatgatgga actgaacgcc gacttctcgc agcgcgttgc
     1681 cgttcacgcg gcccgcatcc cgtgggttcc ctcgccgatc gcaggtgtcg accgcaggat
     1741 gctggaccgg atcggcgatg aagttgcccg cgcgacctcg atcgtccgct acgcgcccgg
     1801 ttcgcacttc tcgccgcata cccatggcgg cggcgaggaa ttgctcgtgc tggaaggcga
     1861 gttcagcgat gagttcggtg actttccggc ggggtcttat gtccgcaacc cgccgacgtc
     1921 gtgccatgag cccaaatcga aaccag
//
LOCUS       DATAVD010001542         3699 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_518509, whole genome shotgun sequence.
ACCESSION   DATAVD010001542 DATAVD010000000
VERSION     DATAVD010001542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3699
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_518509"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..225)
                     /locus_tag="VHX39_29620"
     CDS             complement(<1..225)
                     /locus_tag="VHX39_29620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995353.1"
                     /translation="MDSDLISYSPIMHRPPLRWPNGARVALWIVPNIEHYEYLPKFVR
                     TRDPWPRSPHPDVLGYSQRDYGNRVGLWRFF"
     gene            complement(241..1230)
                     /locus_tag="VHX39_29625"
     CDS             complement(241..1230)
                     /locus_tag="VHX39_29625"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HEX3995354.1"
                     /translation="MTATNGLHIVIPDEYQDAIERLACFSLLDGHNVARYREPAGSFE
                     ELIERLRPADVIVAIRERVNFNRALIERLPNLKLIALVGRNATTIDYAACTEHGVLVS
                     RGESNSPTSPAELTVALMLASRRNIVIEAERMRRGEWPYTLSHRLRGSTLGIFGLGNI
                     GSLVAQAGAGLGMRVLVWGQAGSAKRAVERGYDVADSKAALFEQSDVLSLHVRLRPDT
                     VGIVGPEDLARMKPTALIVNTSRAELIQPGALLAGLQAGRPGYAAVDVYEQEPIINGD
                     HPFLAMPNVICTPHLGWAEWDNFELYYSEAFEQIAAFADGKPLRLINPEVKPR"
     gene            1328..2569
                     /locus_tag="VHX39_29630"
     CDS             1328..2569
                     /locus_tag="VHX39_29630"
                     /inference="COORDINATES: protein motif:HMM:NF024241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995355.1"
                     /translation="MTDQQDIIVPDTSGWRRTLWAMVGIQLLMTGSFSFLSPIVPLML
                     PGLGVTTLQGVDIWSGAITGSTSFVAAFASPVWGKIADRHGRKLALVRSSCAIAIFTA
                     VMGLSTNVWQFFIARAVMGMFAGFSTSAMALVASQVPERRLGYALGWLSTGQMVGSLV
                     GPVLGGILADVTGSYRIPFYITSAACFSGLGLVWFVVREDFVAPKGGAKSRSLFSGLG
                     ILLGSASLMALFFVLFMAQFSVRTVQPMITLFVQELVGSPPQIATLAGIAFSITGLAN
                     LIAAPFLGNRSDVIGYRRVLLICLLGATLTSIPQIFVQSYWLFVAERFAVGLFIGGIL
                     PTANALIGRGVARESRGTVYGMTASATFMGNSLGPLSGGFIAAGLGIRFVFVVTAALL
                     LANLIWVYFKVPEFKDGPVQT"
     gene            complement(2544..>3699)
                     /locus_tag="VHX39_29635"
     CDS             complement(2544..>3699)
                     /locus_tag="VHX39_29635"
                     /inference="COORDINATES: protein motif:HMM:NF017964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HEX3995356.1"
                     /translation="IMHELRYGELAHFNLIRHTPYYGTADATSLYLITLHAAWKATGD
                     RDLLRTYLPNANAALRWIDEEGDRDGDMFQEYQRQTDGGYENMCWKDSGDSMTWPDGT
                     LAKGPKAVCELQGYVYDAWLRMAEVFDAVGQPGRADEFRAKAAALFKKFNDVFWNEEA
                     GFYACLLDGDKRPVPTITSNVGHLLWSGIVPPDRAQRVVAQLMAPEMNTGRGIRTLSN
                     QHAAYNPYSYQNGSVWPHDNSLIALGFKRYGFAADVATIARGISEAASHFESNQLPEL
                     YAGIDRSASPFPVQYLGANVPQAWAAGSVFALLQAILGIEQDAPNQRLWIDPALPAWL
                     PDITMLNVPLGEHRFSLRFTRNGENTTCDVLDGNSTMVQRRPFMSVLDHP"
BASE COUNT          696 a         1130 c         1096 g          777 t
ORIGIN      
        1 gaaaaatcgc cacaaaccga cccggttgcc atagtcacgc tgcgaatagc caagcacatc
       61 cggatgcggt gaccgcggcc atggatcgcg ggtgcgtacg aatttcggca gatactcgta
      121 atgctcgata ttgggcacga tccacagtgc cacgcgtgcc ccgtttggcc aacgtaacgg
      181 cggccggtgc atgataggcg agtacgagat caaatcggaa tccatggagt ggcctcctgc
      241 tcagcgcggc ttcacctcgg gattgatcag gcgcaatggc ttgccatcgg cgaatgcagc
      301 aatctgctcg aacgcctcgg agtagtagag ttcgaagttg tcccactcag cccaaccgag
      361 atgcggggtg caaatgacgt tgggcattgc cagaaacgga tgatctccgt tgatgatcgg
      421 ttcctgctcg tacacatcga cggctgcata acccggacgg cctgcctgca accccgcgag
      481 caacgctccc ggctggatca gttcggcccg cgaggtattc acgatcagcg ccgtcggctt
      541 catgcgtgcc agatcctcgg gtccaacaat tccgacagtg tccggccgca gccggacatg
      601 caacgacagc acgtcggatt gctcgaacag cgccgccttg ctgtcagcca cgtcatagcc
      661 acgctccacc gcccgtttcg ccgaccctgc ctggccccac accaacactc gcatgcccag
      721 tccagcgcct gcctgggcga ccaatgaacc gatattgcca aggccgaaga tgcccaaagt
      781 cgagccgcgc aaacgatgcg acaacgtata tggccattcg ccccggcgca tccgttccgc
      841 ttcgatgaca atattgcggc gcgaggcgag catcaacgca accgtcaact cggccggcga
      901 agtcggcgaa ttgctctcgc cgcgcgacac cagcacgcca tgctcggtgc aggccgcgta
      961 atcgatggtg gtggcattgc ggccaaccag agcaatcagt ttcaggttcg gcagacgttc
     1021 gatcagcgcc cggttgaagt tgacccgctc ccggatggcg acgatgacat cggccggccg
     1081 caaccgctcg atcagttcct cgaacgaccc ggccggttcg cggtatcgcg cgacattatg
     1141 cccatcgagc agggaaaaac acgcaaggcg ctcgatcgcg tcctggtatt cgtcaggaat
     1201 gacgatgtgc agcccgtttg tcgctgtcat gattgcggcc ctgtttcctg ccggcgcgga
     1261 ctgtttcaaa gcggccccga cctgtcaaac ctttccaccg gcggacgatc cgctacgatg
     1321 gccggacatg accgatcagc aagacatcat cgtcccggat acctccggtt ggcgccggac
     1381 actttgggcc atggtgggca tccagctgct catgaccggc tcgttcagct ttcttagccc
     1441 aatcgtgccg ttgatgttac caggccttgg cgtaacgacg ctgcagggtg tggatatctg
     1501 gagcggggcg atcactggtt ccacctcttt tgttgcggct ttcgcctcac cggtgtgggg
     1561 caaaatcgcc gatcgccacg ggcggaaatt ggcgctggtg cgatccagtt gcgcaatcgc
     1621 gatctttacc gcggtgatgg gactgtccac caacgtctgg caattcttca ttgcgcgggc
     1681 tgtgatgggc atgtttgccg ggttttccac ctcggcaatg gcgctcgtcg caagccaggt
     1741 gcccgagcgg cgactcggct atgcgcttgg ttggttgagt accggacaaa tggtcggttc
     1801 actggtaggg ccggtgcttg gcggcattct cgccgacgtc accggcagtt atcgcatccc
     1861 gttctatatc acctcggcgg cctgtttctc cggcctcggt ttggtgtggt tcgtcgtccg
     1921 ggaagatttt gtcgcgccaa aaggcggcgc aaagtcccgt tccctgttct ccggcctggg
     1981 aattttgctc ggctcggcaa gcctgatggc gctgttcttt gttttgttca tggcacagtt
     2041 cagtgtgcgg accgtgcagc cgatgataac tttattcgtg caggagttgg tcggctcgcc
     2101 gccacagatt gcgaccctgg cgggaatcgc attttccatc accggtctgg ccaacctgat
     2161 tgccgcgcca tttctcggca atcgcagcga cgtgatcggc tatcgccgcg tgctgctgat
     2221 ttgcctgctt ggcgcaacct tgaccagcat cccgcaaatc ttcgtgcaaa gctactggct
     2281 gttcgtcgcc gagcggtttg ccgtcgggtt gttcatcggc ggcatcctgc ccaccgccaa
     2341 cgctctgatc ggccgcggcg ttgcgcgtga gagccgggga accgtctatg gcatgacggc
     2401 atcagcaacg ttcatgggca attcgctggg tcccctcagc ggcggcttta tcgccgccgg
     2461 acttggcatc aggttcgtat tcgtcgtgac cgccgcgttg ctgctggcca atctgatctg
     2521 ggtttatttc aaggtgcccg agttcaagga tggtccagta cagacatgaa cggccggcgt
     2581 tgcaccatcg tcgaattgcc atccagaacg tcgcacgtgg tattttctcc attacgggta
     2641 aaccgtaacg agaatcggtg ttcgcccaat gggacgttga gcatcgtaat gtcggggagc
     2701 caggcgggca gagcaggatc gatccagaga cgttggttcg gcgcgtcctg ctcgatcccg
     2761 aggattgcct gcaacagagc gaacaccgaa ccggcagccc atgcctgggg cacgttggcg
     2821 ccgaggtact gaaccggaaa cggtgaggca ctgcgatcga taccagcgta gagttcgggc
     2881 aattggttcg actcgaaatg gctggctgcc tcgctgatgc cgcgggcgat ggtggcaaca
     2941 tccgctgcga agccgtaccg tttgaagcca agcgcgatca ggctgttgtc gtgcggccat
     3001 accgagccgt tctgatagga gtacgggttg tacgctgcgt gctgattcga taacgtacga
     3061 atcccccgcc cggtattcat ctcaggcgcc atcaactggg cgaccactcg ctgcgcacga
     3121 tccggcggaa caataccaga ccacaacaaa tgtccgacgt tggaggtgat ggttggcact
     3181 ggtcgtttgt cgccgtccaa cagacaggcg tagaagccgg cttcctcgtt ccagaacacg
     3241 tcgttgaact tcttgaacaa ggcggcggcc ttcgcgcgga attcgtcggc tcggccaggt
     3301 tggccaaccg catcgaacac ctcggccatg cgtaaccagg cgtcgtaaac gtagccctgc
     3361 agctcgcaaa ccgccttggg tcccttggcc aaagtcccgt ccggccaggt catcgaatca
     3421 ccggaatcct tccagcacat gttttcgtag ccgccatccg tctgccgctg atattcctgg
     3481 aacatgtcgc cgtcgcggtc gccctcttca tcgatccaac gcaaggcagc gttggcattc
     3541 ggcagatagg ttcgcagcag gtcgcgatct ccggtcgcct tccaggcagc atgcaaggtg
     3601 atcaaataca gcgacgtggc atctgcggtc ccgtaatacg gtgtgtggcg gatcagattg
     3661 aaatgcgcca gttcgccgta acgcagctcg tgcatgatc
//
LOCUS       DATAVD010001543         3475 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2378868, whole genome shotgun sequence.
ACCESSION   DATAVD010001543 DATAVD010000000
VERSION     DATAVD010001543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3475
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2378868"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(577..1083)
                     /locus_tag="VHX39_29640"
     CDS             complement(577..1083)
                     /locus_tag="VHX39_29640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEX3995357.1"
                     /translation="MITPQYIRIMAEYNSEMNRRIYAGAAHLSDDQRRADIGLFWKSL
                     HGTLCHLLWGDRQWMSRLDGWPPNTIPNPQSPTLIHDFDELRAERERADAKIEAFASR
                     IDDAWLAEDLTWYSGAAKTTMSREKRGLMVHFFNHQTHHRGQAHAALTIRGVDPGDTD
                     LFLVVPGL"
     gene            complement(1154..2056)
                     /locus_tag="VHX39_29645"
     CDS             complement(1154..2056)
                     /locus_tag="VHX39_29645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3995358.1"
                     /translation="MDVDAEMPEYHALASYYADRGGALWAAEDNGEIVGMIATRPTAD
                     RAWEICRVYVLPALHGGGLGHRLLDVAEAHAMSAGATRLVLWSDTRFDRAHRFYEKRS
                     YVRSGPVRVLADISNSLEYGFAKPVNGIEVLDAAAAASAIPLLSVILDACVEEGAGVS
                     FLAPLPPDKARAFWQDTARDVAAGCKVLLAGWVDGVLAGTVTLALAWPQNQQHRAEVT
                     KLLVHPRGRRHGLARRLMARLEVEALRVGRTLLTLDTRAGDKAEQLYRSMDWIEYGHI
                     PGYAVQADGTFEETLFFWKKLNAG"
     gene            complement(2152..3354)
                     /locus_tag="VHX39_29650"
     CDS             complement(2152..3354)
                     /locus_tag="VHX39_29650"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010509358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEX3995359.1"
                     /translation="MPGFSQRLGRVQVAASVAMTIKARELRAAGKPVITLTTGEPNFA
                     SPLHAIEAAHQAALAGDTKYPPQDGTPAFKKAIREKFKRDSGIDYALDEICVGNGGKQ
                     CLFNAVMVTVDPGDEVVIPVPSWIAYAQMTQLCEGVPVLVNCPQNNGFKPRPEDIDAA
                     ITPKTKWLVLNSPNNPTGAVMTADDLAAIAAVMRKHPHVWILCDDMYEHLIFGGFDHA
                     TMAQVAPDLKDRTLTVSGVSKTYAMTGWRIGFAAGPKPLIRAMVNMQGQATAGISTVG
                     MAAAVAALNGPQDGAQEQSAAYKRRRDIAVAMLNASAGISCHSPEGAFYVFPNVAGCL
                     GKTTAGGRLLKTDEDVCLALLEEQYVATVHGAAYHMSPYLRISTATADDDLVEGLRRI
                     QTFCEGLH"
     gene            complement(3354..>3475)
                     /locus_tag="VHX39_29655"
     CDS             complement(3354..>3475)
                     /locus_tag="VHX39_29655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aspartate aminotransferase"
                     /protein_id="HEX3995360.1"
                     /translation="TVHGAAFCFPGYIRISYASSTEELRDACTRIQRFCEGLH"
BASE COUNT          658 a         1116 c         1021 g          680 t
ORIGIN      
        1 cgcctggaat gccacgatgc tgccggagat cgatgacagc tttggggaga cttattcggc
       61 agcggatctt gccgatcata tcggtgcggg atagcggcag tgcgtgtgct gcggctgaag
      121 taaggcaatt acaccgagga cgcggagtgc tcggaggacg cggagtaaaa acgccattgg
      181 ctggctattt cggtgcaatc tgcagcgcca gtcggtgcag ttatctggta tccacaatca
      241 gtggaccgtg agccgtgatc gtcgttccgt catccgcgtg cttgtcacgc ggatcaacac
      301 cagcaccttg ccgcgattgg tccccggaac aagtccgggg atgacgattg agtgtgtcac
      361 aattcaacga ttctgggtac tggagcaaga ttggccgggt tgacccctat tcccgtcatg
      421 gtcctgctcg tcatggccgt ctgacgaagc actgtcccgg ctccaatggc ccggacgagc
      481 cggaccatga tgatgaaccg gtaatcaatc caaatcaatc aacctccgag cactccgcgt
      541 cctcggtgaa attgccttgc cccaccacgc atcggcctac aaccccggca ccaccagaaa
      601 caaatcggta tcgccgggat cgacccctcg gatcgtcagt gccgcatgcg cctgaccacg
      661 atgatgcgtc tgatgattga agaaatgcac catcagacca cgcttttccc ggctcatggt
      721 cgttttggcg gcgccgctgt accaggtcag atcctcggca agccaggcgt cgtcgatccg
      781 gctggcgaag gcctcgatct ttgcatcggc gcgctcccgt tcggcgcgta gttcgtcgaa
      841 gtcgtggatc aaggtcgggc tttgcggatt ggggatggtg ttgggcggcc agccgtccag
      901 tcgcgacatc cattgccggt cgccccacag caaatgacac agagtgccat gcaacgattt
      961 ccagaacagg ccgatatcgg cgcggcgctg gtcatcgctg aggtgagcgg ccccggcata
     1021 gatgcggcga ttcatctcgg agttgtactc tgccatgatg cggatatact gcggggtaat
     1081 catgctgccc tcaattgcta cgctgcgatc aaagtacccc gtaatcagtt gtcgtcaatc
     1141 ttgattaatc gaatcaacct gcgttcagtt tcttccagaa gaacaacgtt tcctcaaacg
     1201 tgccgtcggc ttgcaccgcg tagccaggga tatggccata ttcgatccag tccatcgagc
     1261 gatagagttg ctcggcttta tccccggcgc gcgtgtccag cgtcagcaac gtgcgcccga
     1321 cccgcagcgc ctcaacttcc agccgtgcca tgagccggcg cgccagaccg tgccgccgtc
     1381 cgcgcggatg caccagcagc tttgtcacct cggcccggtg ttgctggttt tgcggccagg
     1441 ccaatgccag agtaacggtt ccggccagca ccccgtcgac ccaaccggcc aacaacactt
     1501 tgcagcccgc cgcgacgtca cgcgccgtgt cctgccagaa cgcgcgcgct ttgtctggtg
     1561 gcagaggggc caggaacgac acccccgcac cttcttcgac acaggcgtca agaataacgg
     1621 acagaagagg gatcgccgac gccgcagcgg ctgcatccaa aacctcgatg ccgttcaccg
     1681 gtttggcaaa gccatattcc agcgagttcg aaatgtccgc gagcacccgc accggacccg
     1741 agcgaacgta ggatcgcttc tcgtagaacc ggtgtgcgcg gtcgaacctt gtgtcgctcc
     1801 acagcaccag gcgggtcgct ccggctgaca ttgcatgcgc ttccgccacg tcaagcaggc
     1861 gatgccccaa cccgccgccg tgcagcgccg gcagcacgta gacccggcaa atttcccagg
     1921 cgcgatcggc cgtcggccgg gtcgcgatca tgccaacgat ctcgccattg tcttccgcgg
     1981 cccataacgc gccgccccga tccgcataat atgacgccag cgcatggtat tccggcatct
     2041 cggcatcgac gtccatgcgg atgccgggat actgcgacca gcacgcccag gtgagggcga
     2101 tgaaaccggc ggagtcggtg tcgcggccgg gacggatcgg cgtggtgtcg gtcagtgcag
     2161 gccttcgcag aacgtctgaa ttctgcgcaa cccttctacc agatcgtcgt cggcggtggc
     2221 ggtgctgatc cgcaaatacg gagacatgtg atacgcggca ccatgcaccg tcgcgacgta
     2281 ttgctcctcc agcagtgcga ggcagacgtc ctcatcagtc ttcaacaacc tgccgccggc
     2341 cgtggtcttg ccgagacagc ccgcgacatt ggggaacacg tagaacgccc cctccggcga
     2401 gtggcagctg atcccggctg acgcgttcaa catcgccacg gcgatatctc tccgtcgctt
     2461 ataggccgcg ctctgttcct gcgcgccatc ctgcggcccg ttcaacgccg cgactgcggc
     2521 tgccatgccg acggtggaga tgccggccgt cgcctgtccc tgcatattga ccatcgcccg
     2581 gatcaaaggt ttcggtcctg cggcgaaacc gatgcgccag ccggtcattg cataggtctt
     2641 cgagaccccg gacaccgtca gtgtccgatc tttcagatcc ggcgccacct gagccatcgt
     2701 tgcgtggtcg aagccgccaa agatcagatg ttcatacata tcgtcgcaca ggatccagac
     2761 atgcggatgc ttgcgcatca ccgcggcgat ggcggccagg tcgtctgccg tcatcaccgc
     2821 gccggtcggg ttgttcgggc tgttcaacac cagccatttg gtcttcggcg tgatcgcggc
     2881 gtcgatatcc tcgggtcgcg gcttgaagcc gttgttctgc gggcagttca ccagaaccgg
     2941 aacgccctca cacaactggg tcatttgtgc ataggcgatc cacgacggca ccggaatgac
     3001 cacctcgtcg ccgggatcga ccgttaccat gacggcattg aacaggcatt gcttgccgcc
     3061 attgccgacg cagatctcgt ccagtgcgta gtcgatgccg ctgtcgcgtt tgaatttttc
     3121 ccgaattgcc ttcttgaacg cgggcgtgcc atcctgcgga gggtatttag tatcgcctgc
     3181 caaagcggcc tgatgcgccg cctcgatcgc atgcagcggg ctggcgaaat tcggctcccc
     3241 ggtggtcagc gtgatcaccg gtttgccggc cgcacgcagc tcccgcgcct tgatggtcat
     3301 cgccacgctg gccgcaacct gaacccggcc aagccgttgt gaaaaacccg gcatcagtgc
     3361 aacccctcac agaagcgttg gatccgtgtg caggcgtcgc gcagttcctc ggtcgaactg
     3421 gcatagctga tgcgaatata gccggggaag cagaatgccg cgccatgcac cgtcg
//
LOCUS       DATAVD010001544         2810 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1263650, whole genome shotgun sequence.
ACCESSION   DATAVD010001544 DATAVD010000000
VERSION     DATAVD010001544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2810
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1263650"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..782
                     /locus_tag="VHX39_29660"
     CDS             <1..782
                     /locus_tag="VHX39_29660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3995361.1"
                     /translation="AAMHHRFGLDRPLVVQYLLFMGNLLRGDLGQSFYYQMPVADLYM
                     SRLPNSLLLAAVAMTFSLVVGIPTGMLAAVRVGTFWDSAGKLFTLLGLSLPSFFVGLL
                     MILFFSVYLGWLPSSGSGTARHLIMPAFALGWYFAAAHMRLMRSAMLEVLGSEYIKLA
                     RLKGLPQALVIGKHALKNALTPVLTLAGINLVLMINVAVIVETVFAWPGVGRLLYEGV
                     SFRDFPVVQGVVILGGAMIVVVNLLVDVLYAVIDPRIRLET"
     gene            787..1530
                     /locus_tag="VHX39_29665"
     CDS             787..1530
                     /locus_tag="VHX39_29665"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3995362.1"
                     /translation="MSTTTDTSLLTVQLPSRFSFVRSRDFPLVPLLILGIIAFVAVFA
                     NLLAPHDPQVGSLSARFRPPCWLAGGSTKYLLGTDQLGRDVLSRLIFGARVSMVVGFT
                     AVIFAGVVGTTLGIIAGYLGGWVDQVIMRIVDAWLALPALSFAIFLAAIVGPSEMNIV
                     IILALVYWTRYARIVRGEVLSLKEREFVRLAVVAGCSKATIMWRHILPNVVNSAIVLA
                     SLMLGVVIIAEHRCHSSALACRRPSRPGA"
     gene            1500..1679
                     /locus_tag="VHX39_29670"
     CDS             1500..1679
                     /locus_tag="VHX39_29670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995363.1"
                     /translation="MPPPKPAWGVMLSDGKQGLMVGYWWLTVFPGFCIMLMVLSANLL
                     GDWLRVKLDPQLRQL"
     gene            1645..2706
                     /locus_tag="VHX39_29675"
     CDS             1645..2706
                     /locus_tag="VHX39_29675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3995364.1"
                     /translation="MSNSIRNFASSEAARPETAISNRPLLELRNLSTHYISSQGSRVV
                     RAVDDVTLTINAGETLGIVGESGSGKSTLALTILRVLPQAAHIVGGQMLFEGEDLVQK
                     SDAEMRQVRGKRIAMILQDPMASLNPLFTIGNQIAEPIRVHEGVPRATAWRRAIDLLK
                     AVRIASPETRVSQYPHEMSGGMRQRIVGAIGMSCEPRLLIADEPTTSLDLTIQAQYLN
                     LLRELQREHGLALIFITHNLGIVAKMCDQLAVMYAGRVVESGPVSRVFNSPAHPYTEA
                     LLNSIPRMGDNRERLTAIEGQPPNLASLPPGCAFAPRCPSAFDRCRVEAPPAVDLGSG
                     QTARCWLAVPAAGVPMGAA"
BASE COUNT          443 a          907 c          846 g          614 t
ORIGIN      
        1 tcgctgcaat gcaccatcgg ttcggtctcg atcggccctt ggtcgtgcaa tatttgttgt
       61 ttatgggtaa tttgttgcgc ggcgatctgg gccagtcgtt ctattatcag atgccggtgg
      121 ccgaccttta catgtcacgc ctgccaaact cgctgttgct tgctgccgtt gcgatgacat
      181 tctcgcttgt ggtcggcatt ccgaccggca tgcttgccgc agtccgggtc gggacgttct
      241 gggacagcgc cggcaagctg ttcaccctgc ttggcctgtc actgccgtcg ttcttcgtcg
      301 gcctgctgat gatcctgttc ttttcggtgt acctcggctg gctgccgtca tcagggtccg
      361 gaaccgcacg ccacctgatc atgccggcct tcgcgcttgg atggtacttc gccgcagcgc
      421 acatgcgatt gatgcgatcg gcaatgcttg aagtgcttgg ctcggaatat atcaagctgg
      481 cccgcctgaa aggcctgccg caggcactgg tgatcggcaa gcatgccctt aagaacgcct
      541 taacgccggt gctgacattg gccggcatca acctcgtact gatgatcaac gtcgccgtca
      601 tcgtcgagac cgtgttcgcg tggcccggcg tcgggcggct gctttacgag ggcgtttcgt
      661 ttcgcgactt ccccgtggtc cagggcgtgg tgatcctcgg cggtgccatg atcgtcgtgg
      721 tgaatctgct ggtggacgta ctgtacgccg tgatcgaccc ccgcatcaga ctggagacct
      781 gacgccatga gtacgacaac cgacaccagc ctgctcacgg ttcaacttcc gtcacgcttc
      841 agctttgtcc gttcgcgcga ctttccgttg gtgccgctgc tgatcctcgg catcatcgcg
      901 ttcgtcgccg tgttcgccaa cctgctggca ccgcacgacc ctcaggtcgg atcattgtcc
      961 gcgcgcttcc gtccaccatg ctggctcgcc ggaggcagca ccaagtacct gttgggcacc
     1021 gaccagttgg gccgcgacgt gttgtcccga ctgatcttcg gcgcccgcgt ctccatggtg
     1081 gtcggcttca cggcagtgat attcgccggc gtggtcggca ccacgctcgg catcatcgcc
     1141 ggttatctgg gcggctgggt cgatcaggtg atcatgcgca tcgtcgatgc ctggctcgcg
     1201 ctgccagcgc tcagctttgc catcttcctc gccgcgatcg tcgggccaag cgagatgaac
     1261 atcgtcatca tcctcgccct ggtctactgg acgcgttatg cgcggatcgt gcgcggtgaa
     1321 gtcctgtcgc tgaaagaacg cgaattcgtc cgcctcgccg tcgtcgccgg atgttcgaaa
     1381 gccaccatca tgtggcgcca tatcctgcca aatgttgtga attccgccat cgtgctggcc
     1441 tcgctgatgc ttggcgtcgt catcattgcc gagcatcgct gtcattcctc ggcgttggcg
     1501 tgccgccgcc caagccggcc tggggcgtga tgctgtcgga tggcaagcag ggcctgatgg
     1561 tcggttattg gtggctcacc gttttccccg gattttgcat catgctgatg gtgctttcag
     1621 caaaccttct tggagactgg ctacgtgtca aactcgatcc gcaacttcgc cagctctgaa
     1681 gccgcgcggc cggagaccgc aataagcaac cggccgctgc ttgaattacg taacctttca
     1741 actcactaca tctcgtcgca aggcagccgg gtggtccgcg ccgtcgatga cgtcacgctc
     1801 accatcaacg ccggcgagac cctgggcatc gtcggcgagt ccggctccgg caaaagtacc
     1861 ctggcgctga ccatcctgcg ggtgctgccg caggcggcac acatcgtcgg cggccagatg
     1921 ctgttcgagg gcgaggacct cgtgcagaaa tccgatgccg agatgcgcca ggttcgaggc
     1981 aaacgcattg ccatgatcct gcaggatccg atggcgtcgc tgaacccgct gttcaccatc
     2041 ggcaaccaga tcgccgagcc gatccgtgtg catgaaggcg tgccgcgcgc aacagcatgg
     2101 cgccgcgcga tcgacttgct gaaagcggtg cgcattgcct cgccggaaac ccgggtcagt
     2161 cagtacccgc acgaaatgtc cggcggcatg cgccaacgca ttgtcggcgc gatcggcatg
     2221 tcgtgcgagc cgcgcctttt gatcgccgac gagccaacca ccagcctcga cctgaccatc
     2281 caggcgcagt acctgaacct gctgcgcgaa ctgcagcgcg aacacggcct cgctttgatc
     2341 ttcatcaccc acaatctcgg cattgtggcc aagatgtgcg accaacttgc ggtgatgtat
     2401 gccggacgtg tggtggaatc cgggccggtg tcgcgcgttt tcaattcgcc tgcgcatcct
     2461 tataccgagg cgctgttgaa ctcgatcccg cgcatgggcg acaaccgaga gcggctcacc
     2521 gcgatcgagg gtcaaccgcc caaccttgca tccttgccgc ccggctgcgc ctttgccccg
     2581 cgctgcccgt cagcgttcga tcggtgccgc gttgaggcgc cacccgccgt agatctcggc
     2641 tccggtcaaa ctgcgcgctg ctggcttgca gtgcccgccg cgggcgttcc gatgggagcc
     2701 gcgtgatggc agttttggaa gcggtcgggc tgaccaagta tttccccggc cgcaagggcc
     2761 tgttcggtgg cagtagcggc accgtgcgcg ccgtcgacgg catctcgttc
//
LOCUS       DATAVD010001545         4185 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_331921, whole genome shotgun sequence.
ACCESSION   DATAVD010001545 DATAVD010000000
VERSION     DATAVD010001545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4185
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_331921"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..2909
                     /locus_tag="VHX39_29680"
     CDS             141..2909
                     /locus_tag="VHX39_29680"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX3995365.1"
                     /translation="MHEAVSPAVAETASGSRLRGVRHVWGAKLRARVGRTRLSRTTHR
                     LTVLGIMLVTVIIGVTAWLIVGQHRAAIVQARQMTGNLAQVLAEQTSRTIQPVDLTLR
                     EIRERLMIARAADPDVPQDWASKAMHDMLVDRLKRLPQVDALAVVGADGWVKSYSRAG
                     PPPQINVTDREYFKHFRDQDDTALFITGPVKSRGSGAWSVYLARRVNGPHDSFAGVVT
                     AVVTLSFLEDFYRAVTPGGAAVAVLRHDGMILARYPHIETAIGKTLPRGDPWYKLLEG
                     NGGSYQAQGLVSRAPRLVSVRPLHEFPLVINVSTSQSVILAGWRGRALWPVIGAMAAV
                     ACVILLLRAFNTQYDRLAMQNAELETARMRFDAVLDNMSQGLTLFDADQRLMVCNRRF
                     TEMYKLTPDQVPPGTPFADVIKHRIARGTFLAMKPDAYMGRAKNLVETTDSFELVNEL
                     SDGRAVLLHSRPMGGGGWVSTHEDITARRRAEAALAFMARHDALTELPNRTLFQERLI
                     DAIAVARRGTQCALLCLDLDHFKAINDTLGHPVGDNLLRAVADRLSAAVRNIDTVARL
                     GGDEFAIIQTDLGSADQAATLANRIITALREPYDIDGHRVETGTSIGIAIAPRDGTSS
                     DTLLMNADIALYLAKAERRGTYRFFEPEMDRQVQARRKVEMDLRNALQADEFDLHYQP
                     ILDLESGKVAGFEALIRWQHPVRGVISPVDFIPIAEETGLIVPIGDWVLRRACLDAAA
                     WPRDVEIAVNLSSAQFKGGQLLNSVRQALAVSRLDPNRLEIEITESVLLQNSEDTLTL
                     LHQLRGLGIRIALDDFGTGYSSLGYLRSFPFDKIKIDRTFIRDIDANAGSAVIVGAVV
                     GIARALGMTTVAEGVETAEQLALVRRQGCALVQGYLFSRPRPVGEVPALIRSLRILDQ
                     GRVAEVTV"
     gene            3013..3792
                     /locus_tag="VHX39_29685"
     CDS             3013..3792
                     /locus_tag="VHX39_29685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX3995366.1"
                     /translation="MPTRLKGRIDAGKANVNGWLAIPSGFSAEVMAQCGWDSVTVDMQ
                     HGVQDYQSMVQCFQAMQAHPITPLVRVPWNEPGIIGKVLDGGAMGVICPMVNTAAEAK
                     ALADACLYPPKGKRSNGPIRAAMYGEASSYQSTANNEILVIPMIETQQAIDNIDEILS
                     VPGINGIYIGPSDMGLSLGMIPILDREEPIILEIYGKLLASCKKHGKFAGIHNGTAAY
                     AARMMQMGFQLCTIANDSGLMARAAREAVAATRKAAGDVAG"
     gene            complement(3826..>4185)
                     /locus_tag="VHX39_29690"
     CDS             complement(3826..>4185)
                     /locus_tag="VHX39_29690"
                     /inference="COORDINATES: protein motif:HMM:NF025605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator
                     C-terminal domain-containing protein"
                     /protein_id="HEX3995367.1"
                     /translation="DQLVAVGTSFLGVILGTDICKMGHSLPGALRANPDLKDRFYAAG
                     PGRVRAAISGMIARAQAHNELTVDDPDLAADDLVSLWEGNLAAKIAFGLADLATPAEI
                     SRRAARGTEVFLRAYRV"
BASE COUNT          759 a         1329 c         1348 g          749 t
ORIGIN      
        1 ggtgggagca agccggtgcc tagacatgat atcgacgacc ttgccggcgg ctttctccgg
       61 ggggcgggaa gcccgaccgc catgctgtcg cgaaaccatc gcgcgggttc ggagtccgat
      121 gtctcgctgg tgggttttcg atgcatgagg cggtaagtcc tgccgtcgcc gaaaccgcgt
      181 ccggctcgcg cttgcgaggc gtgcgacatg tgtggggtgc gaagttacgc gcgcgcgtgg
      241 gcaggacccg gctgtcacga accactcatc ggttaaccgt gcttggtatc atgctggtaa
      301 cggttatcat cggcgttacg gcctggctta tcgttggcca acacagagcc gcgatcgtcc
      361 aggccaggca gatgaccggc aatctggcac aggtcctggc cgaacagaca tctcgtacca
      421 tccagcccgt cgacttgacc ctgcgggaaa tccgcgaacg gctgatgata gccagggcgg
      481 cggatccgga cgttccccag gactgggcat cgaaggcgat gcacgacatg ctggtcgatc
      541 gtctgaagag gttgccacag gttgacgccc tcgcggtggt tggcgcggac gggtgggtga
      601 agagctattc gcgcgccggt cccccaccgc aaatcaatgt gaccgatcgc gagtacttca
      661 aacacttccg tgatcaggac gacacggcac tgttcatcac cggtcccgtc aagagccgtg
      721 ggagcggcgc ctggtccgta tatctggctc gtcgcgtgaa tggtccgcac gattcgttcg
      781 ccggggtcgt cacggcggtg gtcacgttgt cctttctgga ggatttctac cgggcggtca
      841 cacccggggg cgcggccgtc gcagtgttgc ggcacgacgg catgatcctt gcccggtacc
      901 cccatatcga aacggcgatc ggcaagacgc tgccgcgggg cgacccctgg tacaaacttc
      961 tggaaggaaa tggcgggtcg tatcaggcgc aaggcctcgt cagccgcgcg ccgagactgg
     1021 tttcggttcg cccgttgcac gagtttcctc tcgtcatcaa cgtcagcaca tcccagagcg
     1081 tcatcctggc cggctggcgg ggacgcgcgc tgtggccggt catcggcgcg atggccgccg
     1141 tggcctgcgt gatcctgctg ctgcgggcgt tcaacacgca atacgatcgg ctggcgatgc
     1201 agaatgccga actggagacc gcccgaatgc ggttcgatgc cgtgctcgac aatatgtcgc
     1261 agggcctcac gctgtttgac gccgatcagc ggctgatggt ctgcaatcga cgattcacgg
     1321 aaatgtacaa gctgacgcct gatcaggttc cacctggaac gcccttcgcc gatgtcatca
     1381 agcatcgcat cgcgcgcgga accttcctgg cgatgaaacc ggacgcctat atgggccggg
     1441 cgaaaaacct cgtcgagaca acggattcct ttgaactggt caacgaactt tccgatggtc
     1501 gggcggttct gctgcattcg cggccgatgg gcggcggcgg atgggtctcg acgcatgaag
     1561 acatcaccgc acggcgccgc gcggaggcgg ccctggcatt catggcgcgc cacgatgctc
     1621 tgaccgaact tccgaaccgg acgctgttcc aggaacgcct gatagatgcg atcgccgtcg
     1681 cccggcgggg aacccaatgc gcccttctgt gtctcgatct ggaccacttc aaggcgatca
     1741 acgacacgct gggccatccg gtcggcgata atctgttgcg tgccgttgcc gaccggttgt
     1801 cggccgctgt ccgaaacatc gacacggtcg cccgccttgg cggcgatgaa ttcgccatca
     1861 tccagaccga tctggggtcg gcggaccagg ccgcgacgct ggccaaccgc atcatcactg
     1921 cgttgcgcga accatatgac atcgatggac accgggtgga gacgggtacc agcatcggga
     1981 tcgcgatcgc gccccgggac ggcacctcct ccgacacgtt gctgatgaat gccgatatcg
     2041 cgctttatct ggcaaaggcg gagcggcgcg ggacctatcg cttcttcgaa cctgaaatgg
     2101 atcggcaggt tcaggcccgg cgcaaggtcg aaatggatct tcgcaatgcc ctgcaagctg
     2161 atgagttcga tctgcactat cagccgattc tcgacctcga atccggcaag gtcgccggct
     2221 tcgaggcact gatacgctgg caacatcctg tccgaggcgt gatcagtccg gtcgatttca
     2281 tcccgatcgc ggaagaaacc ggcctgatcg tgcccatcgg ggattgggtg ctgcgcaggg
     2341 cctgtctgga cgccgcagcc tggccacgcg acgtcgagat cgcggtcaac ctgtcgtcgg
     2401 cgcagttcaa gggcggccaa cttctcaaca gtgtaaggca ggcactcgcc gtttccagat
     2461 tggacccgaa ccggctggag atcgagatca ccgaatcggt cctgctgcag aacagcgaag
     2521 acaccctcac cctgctgcat cagctccgcg ggctcggaat ccgcattgca ttggacgatt
     2581 ttggcacggg ctactcctcg cttggctatc tccgcagttt tccgttcgac aagatcaaga
     2641 tcgaccgcac tttcatccgc gatatcgacg ccaatgccgg ctccgcggtc atcgtcggtg
     2701 ccgtggtggg catcgcccgg gcccttggca tgaccaccgt cgccgaaggt gtcgagaccg
     2761 cggaacaatt ggccctggtt cggcgccagg gctgcgcctt ggtgcaaggc tatctgttca
     2821 gccgcccacg gcccgtcggg gaggttccgg cgctcatccg ctcactgcgc atactcgatc
     2881 aggggcgggt cgccgaggtc accgtgtagc caggccggcg gataccggaa gcccgaccgc
     2941 aaggcgcgtt gacgctgctc cgacccacgc ctagcgtgcg gccctcactt cgctttcggg
     3001 agaaacgcac tcatgcccac cagactcaag gggcgcatcg acgccggcaa ggccaacgtc
     3061 aacgggtggc tcgccattcc gtccggcttc tccgcggagg tgatggcaca gtgcggctgg
     3121 gacagcgtca cggtcgatat gcagcacggc gtgcaggact accagtccat ggtgcaatgc
     3181 ttccaggcga tgcaggccca cccgatcaca ccgctggtgc gggtgccgtg gaatgagccg
     3241 gggatcatcg gcaaggtgct ggacggcggt gccatgggtg tcatctgccc gatggtgaac
     3301 accgcggccg aggcgaaggc gctggccgat gcctgcctgt acccgccgaa gggcaaacgc
     3361 agcaacggcc cgatccgagc cgcgatgtac ggcgaggcga gcagctatca gtcgacggcc
     3421 aacaacgaaa tcctggtcat cccgatgatc gagacccagc aggcgatcga caacatcgac
     3481 gagatcctca gcgttcccgg catcaacggc atctatatcg gtccgtccga catgggcctg
     3541 tcgctcggca tgatcccgat cctggaccgt gaggagccga tcatcctgga gatttacggc
     3601 aagctgctgg cgtcgtgcaa aaagcacggc aagttcgccg gtatccataa cgggaccgcc
     3661 gcctatgctg cgcggatgat gcagatgggt ttccagctct gcaccatcgc caacgacagc
     3721 ggcctgatgg cgcgcgcggc ccgtgaagcg gtcgcggcga cgcggaaggc agccggcgac
     3781 gtcgcagggt aatcggtcgg ccgggttggg caagcgaggg cttgcctata cccggtatgc
     3841 ccgcaggaag acctcggtgc cgcgcgcagc acggcggctg atttccgccg gcgtggcgag
     3901 gtcagccagg ccgaaagcga ttttcgccgc caggttgcct tcccacaaac tgaccagatc
     3961 gtcggcggcc aggtccgggt cgtccacggt cagctcgttg tgcgcctggg ccctggcgat
     4021 catcccggat atcgccgccc gcacgcgccc tgggccggcg gcgtagaagc ggtccttcag
     4081 atccgggttg gcccgcagcg cacccggcag cgagtgcccc atcttgcaga tgtcggtgcc
     4141 aaggatcaca cccaggaacg acgtgcccac agcgaccaac tggtc
//
LOCUS       DATAVD010001546         1537 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1263795, whole genome shotgun sequence.
ACCESSION   DATAVD010001546 DATAVD010000000
VERSION     DATAVD010001546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1263795"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1004)
                     /locus_tag="VHX39_29695"
     CDS             complement(<1..1004)
                     /locus_tag="VHX39_29695"
                     /inference="COORDINATES: protein motif:HMM:NF014425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX3995368.1"
                     /translation="MSRPVKWACIGLAVLTLIRLLVASVAPLAPDEAYYWVWSHALAA
                     GYLDHPPMVALWIRVGTSLAGADAIGVRLLGPLAAAVGSVLLYDTAERLFPARGAGLT
                     AAALLNATLILGAGSEIMTPDTPLLLFWTATLWAGARLASGGAPAWWLACGIFAGLAM
                     VSKYTGAFLPLGLGLFAAIAMPRSLRRPEPWLGGLIAGLVMLPVVLWNAQHDWVGFLR
                     QGGRVADWRPERAAQFLGELVGGQIGLATPGVFVLVCVGIVTAIRMTARSRDPSWTLL
                     SALSVPPVLVFLQHAIGDRVEGNWPAIIYPAGAVAAAGITGSTWRRWTWPSFVLGVVI
                     A"
     gene            complement(1196..>1537)
                     /locus_tag="VHX39_29700"
     CDS             complement(1196..>1537)
                     /locus_tag="VHX39_29700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HEX3995369.1"
                     /translation="GVMVHLSVLSLLRDWTPLNFGPEQTIATIVAMVFNFELNNAITY
                     ADQRLRGPRLWRGLLLFMAVCGVGAVANIGIASALYRSNTTWSVAGAMGAIIGVVWNY
                     AVSATLVWRAR"
BASE COUNT          344 a          563 c          414 g          216 t
ORIGIN      
        1 gcaatgacaa cgcccagtac aaacgagggc caggtccacc gccgccacgt tgacccggtg
       61 atgcccgctg cagcgaccgc accggccggg taaataattg cgggccaatt gccctccacc
      121 cggtcaccga tcgcgtgctg caagaatacc agaaccggtg ggaccgataa cgccgacagc
      181 agcgtccacg acggatcgcg cgaacgcgcg gtcatgcgga tcgcggtaac gatcccaacg
      241 cagaccaaaa cgaaaacccc gggtgttgcc aggccaattt gcccgcctac gagttcgccg
      301 aggaactgag ctgcccgctc cggtcgccag tcggcaacgc ggccgccctg ccgcaagaac
      361 ccaacccaat cgtgttgcgc attccacagc acgaccggaa gcattactaa tccagcgatc
      421 agccctccca gccaaggctc cggccgccgc aatgacctgg gcattgcaat cgccgcaaac
      481 aggccgagac cgagcggcag gaacgcacca gtatacttac tgaccatcgc aaggccggcg
      541 aatatgccgc aggcgagcca ccaggctggt gccccaccgc tcgcgagccg tgcaccggcc
      601 cacaacgtcg cggtccaaaa cagcagcaac ggcgtgtcgg gcgtcatgat ttccgagccg
      661 gcacccagga tcaaagtggc attcaacaac gccgccgcag tcagaccggc gccgcgcgcg
      721 ggaaacaacc gttcggcggt atcatagagc aacacggacc cgacggcggc cgccaacggt
      781 cccagcagcc gaacgccaat cgcatcggcg ccggcgagac ttgtccccac ccggatccaa
      841 agcgccacca tcggcggatg atcgagatac cccgcagcga gcgcatgcga ccaaacccaa
      901 taatacgcct catcaggcgc cagcggcgca acggacgcca ccagcagccg gatcagcgtg
      961 agcaccgcca acccaatgca ggcccacttt accggacgcg acatatacgg actttatcca
     1021 tcatccatgt ccatccggcc gcaccgttcg atgtccctgc cgcgcgcgcc tcgggcagac
     1081 ccgcgcatcg atcgttggtc tgttgcggat ccgatctcat tgctggttcg aggcagtgcg
     1141 cttcgcttgc ccgtccgagc actgccctaa cgctcaatcc ggtcccgacc tggcgtcatc
     1201 gggcgcgcca caccaaggtt gccgacacgg cataattcca cacgacgccg ataatggcac
     1261 ccatcgcacc agccaccgac caggtcgtat tcgatcgata gagtgcactg gcgatgccga
     1321 tatttgccac cgccccaacc ccgcacaccg ccatgaacag caacaatccc cgccacagcc
     1381 tgggcccccg cagccgctga tccgcgtagg tgatcgcgtt gttcaattcg aaattgaaca
     1441 ccatcgccac gatcgtcgcg atcgtttgct cggggccgaa attgagcggc gtccaatccc
     1501 gcagcaaact tagcaccgac aggtgtacca tcacccc
//
LOCUS       DATAVD010001547         4612 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2194135, whole genome shotgun sequence.
ACCESSION   DATAVD010001547 DATAVD010000000
VERSION     DATAVD010001547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4612
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2194135"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            196..369
                     /locus_tag="VHX39_29705"
     CDS             196..369
                     /locus_tag="VHX39_29705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin"
                     /protein_id="HEX3995370.1"
                     /translation="MTLKSRKPSAVAPNQLANNSVLSDDELNAVSGGVRKSAGGQASG
                     VMFLAFTFKLVAV"
     gene            complement(384..1256)
                     /locus_tag="VHX39_29710"
     CDS             complement(384..1256)
                     /locus_tag="VHX39_29710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX3995371.1"
                     /translation="MRYRVSHISNYAYGSPVDLAAHLLHLRPRPLPWQQVISDRIVAE
                     PDGARRHDAEDHFGNVVTWLFLDRPHADFIVTAESVVEVSYPVPPVATAPWETVAEDA
                     LSAAAGHAAEYRFDSPMAPAVAETREYAATSFPKGRPVLEALCDLNTRIYREFRFRSG
                     VTTISTPVTQVMKRREGVCQDFTHLMVSALRGLGLPARYNSGYIRTKPPPGQKRRQGA
                     DQSHAWVGAWLGPEHGWVDLDPTNGIVVHEEHVLLGWGRDYGDVSPVQGIILGGGVHH
                     LKVAVDLEPDEAAA"
     gene            complement(1253..3751)
                     /locus_tag="VHX39_29715"
     CDS             complement(1253..3751)
                     /locus_tag="VHX39_29715"
                     /inference="COORDINATES: protein motif:HMM:NF025761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HEX3995372.1"
                     /translation="MNDILPLDEMVDGAHHVRPHWRGVFGAIFSLGHDTLTERAKLLE
                     RAFVEEGITAMLPGEQPVNWRCDPIPLILSAEEFSTLEVGLAQRARLIDAILADIYGP
                     GTLVDSGAIPPDLVYGNPAFLRPCRIAGRDHAPPRHLHIYAADLMRGPDGIWRVVADR
                     ADQARGLAYALENRRNLARIVPEIFQNQQIEPLRPFMETTGEALRALAPGGEGGVALL
                     SGGHADPLWFEHVLLARELSIGLVEPGDLTIRGGLVYLKTLRGLERIGVLFRRQIGAR
                     MDPLELHGNGPPGLLDAMRSGSVHVVNHPGSALAESPALAAFLPGLARQILGEDLITP
                     SQATLFLGDGANLRTVLRDLQGWVIRSATDGASVPVVPEHLSPEKRDELAAQVAARPA
                     HFAALMAPTPSVAPCAMPTGMEPRPVVLRMFLAHDGTTWRAMPGGLARALTDEDAIAG
                     RLPRDAVSKDVWVLPDEFAASRFVPALDTRPLDIRRTAGDLPSRVADNFYWMGRYLER
                     MEEAARLRRALIPRVARPSASPHERADIELLSACLHKAGMLRPEDTFEHSTASRNAAL
                     LGAFRSEGPMRRLLGRVASMSEQLRDRLTGEVHTILTRSLHSLGEAMNRLPSDSDPRA
                     IDRASALTTDILQFSAAIAGLAAENMVRGGGRLFFDFGRRVERAHAILEQLGVLLEQP
                     PGAVQQGHVEAGLQLALELRDSVITYRTRYLAVLQAAPALDLILADEGNPRGLAFQLL
                     AMRDLLRQITEEADSLLGSVDRALRDTREIVSDMLAAPNQMQAAGRLTETLSALELSI
                     EAIADRVSRRYFTLLPIARSLSVDAEPASRSGAA"
     gene            4009..>4612
                     /locus_tag="VHX39_29720"
     CDS             4009..>4612
                     /locus_tag="VHX39_29720"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3995373.1"
                     /translation="MDMLHALETFVRVVETGSFSAVARETNVNTSAVTRLVGQLEQHF
                     GVRLFHRTTRHLSPTEDGQNLLNHAHDVIDAAHGLEDSLGRQRSAPTGRVRVGVTAGG
                     GRLVTPGLGDLLDRYPGLTVDLVIREHFDDLIEDRLDLAVRVGQPDDASLVARSIGGF
                     GRTLVAAPEYLRTHGVPATPEDLQHYRCIVHESGPGSARWR"
BASE COUNT          871 a         1506 c         1446 g          789 t
ORIGIN      
        1 ctgatggtgg ccgggatcca taacgcgtgg gacatcacca tctggatcat cacgcggccg
       61 cgggaataaa caactgatcc ggaccaggca gataacgcgc catgtgctgc acaacacaga
      121 cctgggcaag cctaccgagc attatgcaaa tgcggttggc ggatggtccg ccccggaacc
      181 ttaatgagca gtgcaatgac cctcaaatcc cgcaagccga gcgctgttgc cccaaatcag
      241 ttggccaaca attctgtgct gtcagacgac gaactgaatg ccgtttcggg tggagtgcgg
      301 aaatccgccg gcggtcaggc cagcggcgtg atgttcctcg cgtttacgtt caagcttgtc
      361 gccgtctgaa ccatgcgcgg gtatcaggcc gccgcttcgt ccggctccag atccaccgcg
      421 accttcaggt ggtgcacgcc gccgcccaaa ataatcccct gcaccgggct cacgtctcca
      481 taatcgcggc cccagcccag aagcacgtgt tcttcatgca ccacgatgcc gttggtggga
      541 tccagatcga cccagccatg ctccggcccg agccacgcgc caacccaggc gtgcgactgg
      601 tcagcccctt gccgccgctt ctgccccggc ggaggcttgg tgcgaatata tcccgaattg
      661 taccgcgccg gcaggccaag tcctcgcagc gcgctgacca tcaaatgggt aaaatcctgg
      721 cacacgcctt cgcgccgctt catcacctga gtgaccggtg tcgaaatcgt cgttacaccg
      781 gaacggaaac ggaattcccg atagatccgg gtattgaggt cgcacaatgc ctccagcacc
      841 ggccggccct tcggaaacga cgtagcggcg tactccctgg tttccgcgac cgccggcgcc
      901 atagggctat cgaaacgata ttctgcggca tgtccggcgg cggcactgag cgcatcctcg
      961 gcaacggttt cccatggcgc ggtggcaacg ggcggcaccg gatatgaaac ctcgaccacc
     1021 gactcagcgg tgacgatgaa atcggcgtgc ggccggtcca ggaacagcca ggtcaccacg
     1081 ttgccgaaat gatcttccgc gtcgtgccgc cgagccccgt ccggttcagc aacgatccga
     1141 tccgaaatca cctgttgcca cggcaacggt ctgggccgca gatgcaacaa atgcgcggcg
     1201 aggtcgaccg gactgccata agcatagttg ctgatatgac tgacccggta tctcatgccg
     1261 cgcccgatcg gctggccggt tccgcatcca ccgacaggct gcgggcgatc ggcaacagcg
     1321 taaagtagcg ccgcgacacc cggtccgcga tggcttcgat cgacagttcc agcgctgaca
     1381 gcgtttcggt caaccggccc gcggcctgca tctggttcgg tgcggccagc atgtcggaaa
     1441 cgatctcgcg cgtatcacgc aacgcacggt ccacggaacc cagtaacgaa tctgcttcct
     1501 cggtgatctg gcgcagtaaa tcccgcatcg ccagcaactg gaatgcaagc ccgcgcgggt
     1561 tcccttcgtc ggccagtatc aggtccagag ccggagccgc ctgcaacacg gcaagatacc
     1621 gggtgcgata ggtaatcacg gaatcccgca gctccagcgc aagctgcagg cccgcctcga
     1681 cgtggccttg ttgcacggcg cccggaggct gctccaacag cacgccaagc tgctccagga
     1741 tggcatgcgc gcgttccact ctgcggccaa agtcgaagaa cagccgcccg ccgccacgca
     1801 ccatgttttc tgcggccagg ccggcgatgg cagcggagaa ctgcagaata tccgtggtca
     1861 atgcggacgc ccggtcgatc gcacgcgggt cgctgtcgga cggcaaccgg ttcatcgcct
     1921 cgccgagtga atggagcgaa cgggtgagga tggtgtgaac ctcgccggtc agccggtcac
     1981 ggagttgctc cgacatgctt gcgacccggc ccagaagccg ccgcatcggc ccttccgagc
     2041 gaaacgcacc cagcagtgcg gcgttgcgtg aggcggtgct gtgttcgaac gtgtcctcgg
     2101 gccgcagcat gccggcttta tgcagacagg cactgagcaa ttcgatatcg gcgcgttcat
     2161 gcgggctggc cgacggccgc gccacccgcg ggatcagggc acggcgcaga cgggcggctt
     2221 cttccatccg ctccagatag cgtcccatcc aataaaaatt atccgccacc cgactgggca
     2281 gatcgccggc ggtgcggcgg atgtccaatg gccgtgtgtc cagcgccggc acgaaccggc
     2341 tggcggcaaa ttcgtcgggc agcacccaga cgtccttgga cacggcatcg cgcggcagcc
     2401 gcccggcgat ggcatcctcg tccgtcagtg cccgcgccag cccgccgggc atcgccctcc
     2461 aggtggtgcc atcatgcgcc agaaacatcc tcagcacgac cggccgaggc tccatcccgg
     2521 tcggcatggc acacggcgca accgacggtg tcggcgccat cagcgccgca aaatgcgccg
     2581 gtctcgctgc gacctgggcg gccagttcgt cgcgcttttc gggggacaga tgctccggca
     2641 ccaccggcac cgaggcgccg tcggtggcac tgcggatcac ccagccctgc agatcgcgca
     2701 acacggtacg cagattggca ccatcgccga gaaacagcgt ggcctgactg ggcgtgatca
     2761 ggtcctcgcc aaggatttgc cgggccaggc ccggaagaaa cgcggccagg gcaggggatt
     2821 ctgcaagagc cgaaccggga tggttcacca catgcaccga gccggagcgc atggcgtcca
     2881 acaaccctgg cggcccgttg ccgtgcagct cgagcgggtc catgcgcgcg ccgatctgac
     2941 ggcgaaacaa tacgccgatc cgctccaggc cccgcagcgt cttcaggtaa accagaccgc
     3001 cgcgaatggt caggtcgcca ggctcgacca acccgatcga cagttcgcgg gccagcagga
     3061 cgtgttcgaa ccacaacgga tcggcatggc cgccggacag cagcgcgacg ccgccctcgc
     3121 cacctggagc cagagcgcgc aacgcctcac cggtggtttc catgaacggg cgtaacggct
     3181 cgatttgttg attttgaaag atttcaggga cgatgcgcgc aaggttgcgg cgattttcca
     3241 gcgcataggc gaggccgcgt gcctgatcgg cccggtccgc cacgacacgc cagatcccat
     3301 cggggccgcg catcagatcg gccgcgtaaa tgtgcaggtg cctgggtggc gcatggtcgc
     3361 gaccggcgat gcggcagggt cgcaagaaag ccggattgcc gtaaaccaga tcgggtggga
     3421 tggccccgct gtccaccagc gtccccggtc cgtagatatc agccaggatg gcatcgatca
     3481 gccgggcccg ttgtgccagc ccgacttcga gtgtggaaaa ctcttccgcc gagaggatca
     3541 gcgggatcgg atcgcagcgc caattgaccg gctgttcgcc gggcagcatc gcggtgatgc
     3601 cctcctcgac gaaggcacgt tccagcaatt tggcgcgctc ggtgagggtg tcgtgaccga
     3661 ggctgaaaat ggcgccaaac acgccacgcc agtgcggacg cacatggtgt gcgccatcaa
     3721 ccatctcatc gaggggcaga atgtcgttca tgggctcgtt cacgggtccg gcgccgagcc
     3781 tgcccgcttg acccgtgcct tgtccatggc ccgcgccttg ttcatggatt tttgcgaatg
     3841 ctgtggccgg tgacaggttg gacggcaagg ctgtgccgat ctttgcgtac gtaagtattc
     3901 cgcgtcagca atttcacccg aaaaccgtcg atgctttgca cacaatgccg attttgtcgg
     3961 gataatttga tacctggact cctaatatgg cggtaatatg gttgcaacat ggatatgctg
     4021 cacgccttgg agacgtttgt ccgcgtcgtc gaaaccggct cgttttccgc cgtcgcgcgc
     4081 gagaccaacg tcaacacttc ggcggtgaca cgtctggttg ggcaactgga acaacatttc
     4141 ggcgtccgcc tgttccatcg caccactcgg catttgagcc cgaccgagga cggtcagaac
     4201 ttgctcaacc acgcccatga cgtgatcgac gccgcgcatg gactggagga ttcgcttggc
     4261 cggcaacgca gtgcgccaac cgggcgggtg cgggtcggtg tgaccgcggg tggcggccgg
     4321 ctggtgacgc ctggtttggg cgatttactc gaccgttacc cgggcctgac ggtcgatctg
     4381 gtgatccgcg aacacttcga cgatttgatc gaggaccggc tggatctggc ggtgcgcgtc
     4441 gggcaacccg acgatgcctc gctggtggcg cgatcgatcg gcgggttcgg ccgcacgctg
     4501 gttgcggcgc cagagtatct gcgaacccat ggcgtacccg cgacacccga ggacctgcaa
     4561 cactaccggt gtatcgtgca tgaaagcgga cccggcagtg cgcgctggcg gt
//
LOCUS       DATAVD010001548         3232 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_151039, whole genome shotgun sequence.
ACCESSION   DATAVD010001548 DATAVD010000000
VERSION     DATAVD010001548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3232
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151039"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..224
                     /locus_tag="VHX39_29725"
     CDS             <1..224
                     /locus_tag="VHX39_29725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006115266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX3995374.1"
                     /translation="AAYGVFAISGADSVIRPWFITRGAHLPFLLTILGVLGGALAFGL
                     LGIFLGPVLLGVGFTLLNEWAKDAEQSGC"
     gene            354..1412
                     /locus_tag="VHX39_29730"
     CDS             354..1412
                     /locus_tag="VHX39_29730"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEX3995375.1"
                     /translation="MRTFNVLTLTRLSAADRAKIAAVDPAIRLTDAAGWFDGEYRETW
                     PAFSATRYLAPGTTGTGTRDDRDRMLAEAEIILGSWPFPLDLRSRSPRLKWFHQRPAG
                     ASNLLKGDLWGSDVTVTTSRGLGNTLAIAEYAVAGILHVAKDFRRVPIERDAAAFDAR
                     AWRPWLLLDKTVCVVGAGGIGLEVGRLCAALGMRVVGTRRHRRPDEELPPGFSEIGGA
                     EDLDRFLPDSDIVVVCCQWTPETNRLFNRDRFAAMKAGGIFVNVARGEIVDEDALADA
                     LEHNQLRGAVLDVYVGEFEHAPMARLWSDPRVLITPHISGASDRDLHGAIELFRDNLR
                     AYIDGGVLQNIIDWERGY"
     gene            complement(1447..1797)
                     /locus_tag="VHX39_29735"
     CDS             complement(1447..1797)
                     /locus_tag="VHX39_29735"
                     /inference="COORDINATES: protein motif:HMM:NF021510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2237 domain-containing protein"
                     /protein_id="HEX3995376.1"
                     /translation="MGGPLDVCSSKPMTGFFRNGCCDTSPEDVGSHTVCAVMTSEFLA
                     YSKQAGNDLSTPVPEYGFVGLKPGDRWCLCAPRWQEALEADAAPKVVLRATAEGALQH
                     CALADLVRFAIDLV"
     gene            complement(2065..2676)
                     /locus_tag="VHX39_29740"
     CDS             complement(2065..2676)
                     /locus_tag="VHX39_29740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012973366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031966 - mitochondrial membrane
                     [Evidence IEA];
                     GO_process: GO:0033617 - mitochondrial cytochrome c
                     oxidase assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEX3995377.1"
                     /translation="MSTITDRGPSNGTVYAIIGLLVAILLLAAGGYLFLSGSQPAALT
                     VGGPFSLIDGDGKPVTDQTWRGKYMLVYFGYTYCPDVCPTTLTNVATALDKLGPKADE
                     IQPLFITVDPKRDTPAVVKQYAAAFSPRLIGLTGTPQQIDAAAKAYRVYYAEHRTGPG
                     PNDYSMDHSSVLYLMGPDGRFIAPVRADQDGPEIAAALTKLLS"
     gene            complement(2660..>3232)
                     /locus_tag="VHX39_29745"
     CDS             complement(2660..>3232)
                     /locus_tag="VHX39_29745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995378.1"
                     /translation="PDGTALMPAFATILSQQARWSAIDYVHAMNAGAVARGLGGWPGR
                     LPAPPLALTCATIKAHSLADLRGKAIRVILGAPPNPLSGVPPVNDIPVITVWIPGTDT
                     EAAPIRGVDCLAHGDADEALAYAVLAGSADGHLIPARFLIDPEGVLRSVWRKDDGNQW
                     ADPARLLEEVRTICTKPLIIGPGGEYEHHH"
BASE COUNT          581 a         1021 c         1022 g          608 t
ORIGIN      
        1 ttgcggccta tggagttttc gcgatttccg gagcagacag tgtgatccgg ccctggttca
       61 tcacccgtgg tgcccatttg ccgttcttac tgaccattct cggggtgctg ggtggtgcgc
      121 tggcctttgg ccttctgggc atattcctcg gcccagtact gctcggtgtc ggcttcacct
      181 tgctgaacga atgggcaaag gacgctgagc agagcgggtg ttgatccccg gccgcacggc
      241 tctgcctgca tgcgaatggc cgatgggcag acaccatggt ctcacgcccg gttccagacc
      301 atacttggcc attggcgtta tccgtcatcc cctgttctcg caggaagccg ctcatgcgaa
      361 cgttcaacgt tctgaccctc acgcgcctca gtgccgccga ccgagcaaag atcgcggcgg
      421 ttgacccggc gatccggctg accgatgccg ccggttggtt cgacggcgag tatcgggaaa
      481 cctggccggc gttcagtgcg acccgatatt tggcgccggg cactacgggc acaggcaccc
      541 gcgatgaccg cgatcggatg ctcgcggagg ctgaaatcat tctcggcagt tggccgtttc
      601 cgctcgatct gcggagccgg tcgccgaggc tcaagtggtt tcaccaacgg ccggccgggg
      661 ccagcaatct gctcaagggc gatttgtggg gtagcgatgt aactgttacc acgtcgcgcg
      721 gattgggcaa cacgctggcc atcgcggaat atgcagtggc cggcattctg cacgtcgcca
      781 aagactttcg ccgcgtcccc atcgagcgtg acgcggccgc tttcgatgcg cgcgcctggc
      841 ggccgtggtt gttgctggac aagaccgttt gcgtcgttgg cgccggcggc atcgggctcg
      901 aggttggtcg gctctgcgca gcacttggca tgcgggttgt cggcactcgt cgccaccggc
      961 gccccgatga agagttgcca ccaggcttct cggagatcgg cggcgccgag gacctcgacc
     1021 gatttctgcc ggacagcgat atcgtggtcg tctgctgcca atggacgccg gagacaaacc
     1081 ggctgttcaa ccgcgaccgg ttcgccgcga tgaaggcggg aggcattttc gtcaatgtcg
     1141 cccgcggcga gatcgttgac gaggacgctc tcgccgatgc gctggaacac aaccagctgc
     1201 gcggcgccgt gctcgatgtc tatgtcggtg aattcgagca cgcgccgatg gcacggctct
     1261 ggtcggaccc aagagtgctg atcacgccgc atatttccgg tgccagtgac cgggatttgc
     1321 atggcgccat cgagttgttc cgtgacaatt tgcgcgctta catcgacggc ggagtgttgc
     1381 agaatattat cgactgggag cgcggctatt aagccggaat gctcgcccaa tcggggtcac
     1441 cagccgtcac acgaggtcga tcgcgaaccg gaccagatcg gcaagtgcgc agtgttgtag
     1501 cgcgccctcc gccgttgccc gcagcaccac ctttggggcg gcgtctgcct caagggcttc
     1561 ctgccaacgc ggtgcgcaca aacaccaacg atcgccgggc ttcagtccaa cgaacccata
     1621 ttcaggcacc ggcgtggaaa gatcgttgcc ggcctgcttg ctgtaggcca gaaattcact
     1681 ggtcatgacg gcgcagaccg tgtggctgcc gacatcctcc gggctggtat cgcaacaacc
     1741 gttgcgaaag aaaccggtca tcggcttgct ggagcatacg tccaatgggc cgcccatgac
     1801 attgcgggac ggccggcggc ccggacggcc acccgtttcg tctaagggca cgtgacgctc
     1861 cttgcgatga accagtaatc agttgcgacc ttatcccgcc cctcgcaact gcgccaccgc
     1921 cctcggactg cttcggggct ttacggcgca agactgatgc ggcttcaaaa caacatcacg
     1981 gagccgtgca gcgccatcgg cccggcttcg cctgccggtc gcagcaacgc cgcaatcatt
     2041 gcccggcagc ccgatccgcc agggtcatga cagcaatttc gtgagcgcgg cggcaatttc
     2101 gggcccatcc tgatccgccc gcaccggcgc gatgaaccgc ccatccggcc ccatcaaata
     2161 cagcacggaa ctatggtcca tcgagtaatc gttcggtccc ggacccgtcc gatgctcggc
     2221 gtaatagacg cggtatgctt tggccgcggc gtcgatctgc tgcggcgtcc cggtcaaccc
     2281 gatcagccgg ggactaaacg cggcggcata ttgtttcacc acggcaggcg tgtcgcgttt
     2341 gggatcgacg gtgatgaaca acggctgaat ctcatcggcc ttgggcccga gtttgtccaa
     2401 agcagtggcg acgttggtca gagtggtcgg gcaaacatcc gggcaatagg tatagccgaa
     2461 atagaccagc atatatttgc cgcgccaggt ttgatccgtg accggcttgc catcgccgtc
     2521 gatcaaggaa aacggaccgc ccacggtcag cgctgccggc tgcgaaccgg acaggaacaa
     2581 atatcctccc gcggccagca acaggatcgc caccagcaaa ccaatgatgg cgtagacggt
     2641 accgttggaa ggtccccggt cagtgatggt gctcatactc gcctccaggc ccgattatca
     2701 gaggtttggt gcagatcgtg cgcacttcct caagcaggcg cgccggatcg gcccattgat
     2761 tgccgtcgtc cttgcgccac acggaacgta gcacaccctc ggggtcgatc agaaatcgcg
     2821 ccgggatgag gtgcccgtca gccgagccgg caaggactgc gtaagccagg gcctcgtccg
     2881 catcgccgtg agcgaggcaa tccacaccac ggatcggtgc ggcctcggtg tcggttcccg
     2941 ggatccacac cgtgatcacc ggaatgtcat tcaccggcgg cacgccggac agcggatttg
     3001 gtggcgcccc gaggatcacg cggatcgctt tgccgcggag gtcagccagg gagtgggctt
     3061 tgatcgtcgc acaggtgagc gcgagcgggg gcgccggcag acgaccgggc cagccgccga
     3121 ggcctcgtgc gactgcgccg gcattcatcg catgcacata atcgattgcc gaccaacgcg
     3181 cctgctgcga caggatcgtt gcgaatgccg gcattagtgc ggtgccatcc gg
//
LOCUS       DATAVD010001549         1899 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1636437, whole genome shotgun sequence.
ACCESSION   DATAVD010001549 DATAVD010000000
VERSION     DATAVD010001549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1636437"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..470
                     /locus_tag="VHX39_29750"
     CDS             <1..470
                     /locus_tag="VHX39_29750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995379.1"
                     /translation="ALSDAEKSAALAASREVTESLYPGLDLADEIATVDAQGLGDTIL
                     LEGGGRLAAFAICHYGPRSEAGEGKCFIKFGAVRATSAAERDYGRLLNATEALAVSVG
                     MPALLAGANLARHEAYQFLVARGFRTEIQGVTMHQRNEQGYSRPGVYIIDDWR"
     gene            776..>1899
                     /locus_tag="VHX39_29755"
     CDS             776..>1899
                     /locus_tag="VHX39_29755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HEX3995380.1"
                     /translation="MHPGRPVHPNLTAPALVAESLRRREGRLSIDGSLMVETGVHTGR
                     SVRDKFVVDEPSVTREIWWGPINQRYSPEKFAVLKARVQAYLQGQDLFTQDLYAGADP
                     AHRVRVRLVTTFAWASLFARNMFIRPPAHELETFEPDYVILHAPLFQTDPAIDGTRSS
                     TTIALSLEQKFIVIAGSEYAGEIKKSIFTVMNWILPAKGILPMHCSANIGPEEDVALF
                     FGLSGTGKTTLSSDPHRRLIGDDEHGWGDDGTFNFEGGCYAKVINLSKEAEPEIFAAT
                     NRFGTVLENVVGDELGVLDLDDDRLTENTRSCYPIEFIPHVEFSGRGGQPKNIIMLAC
                     DAFGVLPPISRLTPAQAMYHFLSGYTAQVAGTEKGLGAEP"
BASE COUNT          365 a          598 c          591 g          345 t
ORIGIN      
        1 gtgcgctgag cgatgccgaa aaatccgctg ccctggctgc cagccgcgag gtgacggaaa
       61 gcctgtatcc cggcctcgac ctggctgacg agatcgcgac ggtcgacgct cagggattgg
      121 gtgacactat tttgctggag ggcggcggcc gcctggcagc gttcgccatt tgtcattacg
      181 ggccgcgcag cgaggccggc gagggaaagt gcttcatcaa gttcggcgcc gtgcgggcaa
      241 cctccgccgc agaacgggac tacgggcgtt tgttgaacgc cactgaggca cttgccgttt
      301 ccgtaggcat gccggcgttg ctggccggag cgaacctcgc acggcacgag gcgtatcagt
      361 tcctcgtcgc gcgtggcttt cgcaccgaaa tccagggggt tacgatgcat caacggaacg
      421 aacagggata ttcccggccc ggggtctaca tcatcgacga ttggcggtaa gcggggacga
      481 tgggctgaat gctgccacga tctcgccgta ttgtcggccc ggaaattgcg tgcgctccaa
      541 cgacagacac gttatcctat ggtaacgcgg gaactgcgag aaaacctcgg agatcggccc
      601 ggatcaggcc atctcgcatg tgcgaaacgg gtcccttgcg cgcggggcca tttgattgct
      661 accggcaggt ggatcgagcg agacatcgac cggacttacg aacgggaaac ggacattgaa
      721 ccattcatcg gaccacaaat cgaaccacat caactcggcg cttgccggta ccggtgtgca
      781 tcccggccgc cccgtacacc caaatctgac tgcgcccgcc ctggtggcgg aatcactgcg
      841 ccggcgggag ggccggctgt cgatcgacgg ctccctgatg gtggagaccg gcgtgcacac
      901 cggccgctcg gtgcgcgaca agttcgtggt cgacgaaccg tcggtgaccc gcgagatctg
      961 gtgggggccg atcaatcaac gttattcgcc cgagaagttc gcggtgctga aggcccgcgt
     1021 gcaggcctat ttgcaaggcc aggacctgtt cacccaggat ctgtatgccg gcgccgaccc
     1081 ggcccaccgc gtgcgcgtcc gccttgttac caccttcgcc tgggcttcat tgttcgcgcg
     1141 taacatgttc attcgccctc ccgcacacga actggagacg ttcgagcctg actacgtcat
     1201 cctgcacgcg cccttgttcc agaccgatcc ggcgatcgac ggcacccggt catcgaccac
     1261 catcgcactt tcgctggagc agaagttcat cgtcatcgcc ggcagcgaat atgccggcga
     1321 gatcaagaaa tcgatcttta ctgtgatgaa ctggatcctg cccgccaagg gcatcctgcc
     1381 gatgcattgc agcgccaata tcggccccga ggaagacgtc gccctgttct tcggcctgtc
     1441 gggcaccggc aaaaccacgc tctcgtcgga cccgcaccgc agactgatcg gcgacgacga
     1501 acacggctgg ggggacgacg gtaccttcaa tttcgaaggc ggttgctatg ccaaggtcat
     1561 caacctgtcg aaggaagccg aaccggagat cttcgctgca accaaccgct tcggcacggt
     1621 gctggaaaac gtcgttggcg atgagcttgg cgtgctcgac ctcgacgatg accggctgac
     1681 cgagaacaca aggtcctgct acccgatcga gttcatcccg catgtcgaat tctccggccg
     1741 cggcgggcag ccgaagaaca tcatcatgct ggcctgcgac gcgttcggcg tgctgccgcc
     1801 gatttccagg ctgacgccgg cgcaggcgat gtatcacttc ctttccggct atacggcgca
     1861 ggttgcgggg accgaaaaag gcctcggcgc ggagccgaa
//
LOCUS       DATAVD010001550         3633 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2379469, whole genome shotgun sequence.
ACCESSION   DATAVD010001550 DATAVD010000000
VERSION     DATAVD010001550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3633
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2379469"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(105..881)
                     /locus_tag="VHX39_29760"
     CDS             complement(105..881)
                     /locus_tag="VHX39_29760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HEX3995381.1"
                     /translation="MNAPAPGLLAPDEPAAVRVLREAGTSDILFTADHAGKLIPRSLD
                     YLGVAAAELERHIAWDIGIAGVTERLSAALDATAVLQTYSRLVIDCNRDPSWPSAMPA
                     ISEFTEIPGNRDLTEADRVARTIGIFRPYHDRIAALLDARAAAGRRTVVVAMHSFTPV
                     FKGESRAMQVGVLYFRRTRLAEIMLDLLRQEPDLTVGENAPYALTEDSDYSIPFHAER
                     RGLEHVEIEIRQDLIATPDGQAAWANRFAHWFTLALPQLG"
     gene            complement(921..1733)
                     /locus_tag="VHX39_29765"
     CDS             complement(921..1733)
                     /locus_tag="VHX39_29765"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEX3995382.1"
                     /translation="MALPSRRIAFVLASTNHGSMILNRFDYRETTPGHGIGVGMALLS
                     NSCYEPEEAAMVATLLDARRRHFGDGVNVLDIGANIGAFTIEWARHMTGWGRILAFEA
                     QERIFHALAGNVALNNCFNARPFWAAVTSQQGLIGVPSPNYFAPGSFGSLELRRNERN
                     EDIGQPIDYSQERLVDVTAVTIDALGLTRVDLVKVDVEGMELEVLEGARGTIGQMHPI
                     LAIETLKTDRAALKTYLDEFGYTTFAAGPNVLAIHPDDPTIEVVREIPAPPA"
     gene            complement(1788..2570)
                     /locus_tag="VHX39_29770"
     CDS             complement(1788..2570)
                     /locus_tag="VHX39_29770"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX3995383.1"
                     /translation="MSYDPESAAAALHRMRQERGLVLPLPGEVAPQTEADGAAAQLAL
                     ARLVGAVPCAGFKIGATGKRMQEYLGLNGPAAGFMQSATVFRDDGAIPFADCIKPGVE
                     CEVAVRLAHDLPPGSYTRETVASAVGEFVAGIEIVENRYDDLKTLGTPTLIADQVYHV
                     AAVLGSQGGVDWRTLEIGALRGRILIDGVERDAGITSDLMGHPFTCLAWLASSSVAAA
                     FGGLRAGQCVMLGSVTPPVWLDRPALVTVEFEGLPAVTARLT"
     gene            complement(2567..3280)
                     /locus_tag="VHX39_29775"
                     /pseudo
     CDS             complement(2567..3280)
                     /locus_tag="VHX39_29775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493773.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
BASE COUNT          684 a         1173 c         1142 g          634 t
ORIGIN      
        1 ctgcgcgcaa agaattcggc accggtgatc ggttcgatcg cggccatgtg gttccctccg
       61 tacgattgcg cagagtttag gcccactggg cttggtggac aatgtcagcc cagttgaggg
      121 agcgccaaag tgaaccagtg ggcgaaacga ttggcccatg cggcctgacc gtccggcgtg
      181 gcgatcaggt cctgccggat ttcaatctcg acatgttcca ggccgcggcg ctcggcatga
      241 aacggaatgc tgtaatcgct gtcctcggtg agcgcgtagg gcgcattctc gccgacggtc
      301 aaatcgggct cctgccgcaa caaatccagc atgatttccg cgaggcgcgt ccggcggaaa
      361 tacaacacgc cgacctgcat cgctcgtgac tcacccttga atacgggtgt gaaactatgc
      421 atcgcaacca caacggttcg gcggccggct gcagcgcgcg cgtccagcag tgcagcgatc
      481 cgatcgtgat agggacggaa tattccgatt gtgcgcgcca cccgatccgc ctcggtcagg
      541 tcccgattgc cggggatttc ggtaaattca ctgatcgccg gcatcgcaga tggccaggat
      601 ggatcacggt tgcaatcgat caccaggcgg gaataagtct gcaacacggc ggtcgcgtcc
      661 agtgcggccg acagacgctc ggtgacgccg gcgataccga tgtcccaggc gatatggcgt
      721 tcgagttccg ccgccgcaac tccgagatag tccagagaac gtgggatcag tttgccggca
      781 tgatcggcgg tgaacaggat gtcggatgtg cctgcctcac gcaacacgcg cacggcagcg
      841 ggttcatcgg gagccagcaa accaggcgcg ggagcgttca tcgcctgtat cctacgccga
      901 accggcctgg cgttgccaga tcacgcagga ggcgccggaa tctctcgcac gacttcaatt
      961 gtgggatcgt ccgggtggat cgccagcacg tttggccccg cagcgaacgt cgtataaccg
     1021 aactcatcca gatacgtctt cagcgcggcc cggtcggtct tcagggtttc gatcgccagg
     1081 attggatgca tttggccgat tgtgccgcgc gcgccttcga gtacctccag ttccatccct
     1141 tcgacgtcca ctttcaccag atccactcgg gtcaggccaa gcgcatcaat cgtaacggcg
     1201 gtgacgtcga ccaaccgttc ctggctgtaa tcgatcggtt gcccaatgtc ctcgttgcgt
     1261 tcgttgcggc gcagctcgag actgccgaaa gagcccggcg cgaaataatt tggcgaaggc
     1321 acaccgatca aaccctgctg actggtgacc gcagcccaga atggacgcgc attgaagcaa
     1381 ttgttgagag cgacattgcc agccagtgca tgaaagatcc gctcctgcgc ctcgaatgcg
     1441 aggatgcggc cccacccggt catatgtctt gcccattcaa tggtgaacgc accgatgttg
     1501 gcaccgatat ccagcacgtt gacgccatcg ccaaaatgcc gccggcgcgc atccagcaga
     1561 gtggcaacca tcgccgcctc ttccggctcg taacaggagt tggacagcaa tgccatgccc
     1621 acgccgatgc catgacccgg cgtggtttcc cggtagtcga accggttgag gatcatcgaa
     1681 ccgtgattgg ttgaggccag cacgaatgca atgcggcggg atgggagcgc catcgctgca
     1741 gtctccgata agtgtgcaac caggcccggg acgttgttca attgggatta agtcaacctt
     1801 gccgtcaccg ccggcagccc ttcgaactcc accgttacca acgctggccg atccaaccat
     1861 accggtggcg tcacggaacc cagcatgaca cattgaccgg cccgcaatcc gccaaacgca
     1921 gcggcaaccg aggaactcgc gagccacgcc aaacaggtga agggatggcc catcaggtcg
     1981 ctggttatgc cggcgtcgcg ctccacgcca tcgatcagga tgcggccgcg taacgctcca
     2041 atttccaatg tacgccagtc gacgccaccc tgcgaaccca gtacggcagc aacatgatag
     2101 acctgatcag caatcaacgt cggcgtgcca agcgtcttca ggtcgtcgta ccgattttcc
     2161 acgatttcga tgccggcaac gaactccccg acggcagagg caacggtttc cctggtgtag
     2221 gatccgggcg gcaggtcgtg cgccagacgc accgcgacct cacactcgac accgggtttg
     2281 atgcagtcgg cgaacggtat cgcgccatcg tcacggaaca ccgtcgcgga ctgcatgaac
     2341 ccggcagccg gtccgttcaa ccccagatac tcctgcatcc gtttaccggt cgcaccaatc
     2401 ttgaagccgg cgcatggcac cgcgccaacc agccgcgcga gagccagttg cgctgcggca
     2461 ccgtcggcct cggtctgcgg tgcaacctca ccgggcaacg gcaacaccag cccccgttcc
     2521 tggcgcatcc gatgcagtgc ggcggcggcg gattcgggat cgtaactcat gccgtccgcg
     2581 tcagctcgta caatgcgaca gcggcggcgg aggagacatt caggctctcg accacgccct
     2641 tgatcgaaag tccggcaatc tcgtcacagg tgtcgcgggt cagcctgcgc aacccctcac
     2701 cctccgcgcc gagcaccagg gccacgcggc ggccggcgaa gaacggaccg gacaacggtt
     2761 ttcccgcggc atccagaccc acgcaccaga catttgccgc cttcagcgcg atcagcgtgc
     2821 gggcaatgtt gaccgcgcgc aacaatggca tggtctccag cgcaccggat gcggccttgg
     2881 cgagggatcc ggtttcttcc ggcgcattgc ggtcctgggt gatcacggcg gccgcgccga
     2941 acgccgcggc cgagcgcatg atcgcaccaa tgttgcgcgg atcggtgacc tgatccagca
     3001 cgaggatcgg accgttgcgc tccaacaccg cagcgaggct tggctgcgcc agcggatcgg
     3061 cgagcagcgc ggcgccctga tgcgcgatgt cgcgacccag tagttgatcg atgcgggcgc
     3121 ggtcggtgcg ctcggggggc agcggccagg gtggaggcag tgtccgggtc agcgcggctt
     3181 cggcttcctc cgtcagaatc aggcggcgca agcggcgctg ctggttcgcc aaagcggcag
     3241 ccaccgcgtg gtggccataa agccagactg cacctttcgg cgtatcaggc ccaggccgtg
     3301 gaccatcctg ctggcgcggc cgctgatcga aacgattatc gcggcgcgga ccgtcggaac
     3361 gttgttgaaa cggctgcgcg ccctgatctg ctctgggcgg ccgctgaccg tgcggcggcg
     3421 caggccgttg gttctgttgg ccggcgccag cgcggttctg ttgaccgccg gcaagcgaca
     3481 gccggtttgg cgacaccggg gcggcggact gaccgccgcg gtcgggtggc cgtccgggcc
     3541 cgcccgaatt gggaccgcgg tttgatggag gccggccgga gccgcccggc cggttgccat
     3601 gtggaggttt catgcggcgt gggtataacc ctc
//
LOCUS       DATAVD010001551         4325 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_151481, whole genome shotgun sequence.
ACCESSION   DATAVD010001551 DATAVD010000000
VERSION     DATAVD010001551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4325
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151481"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1412)
                     /locus_tag="VHX39_29780"
     CDS             complement(<1..1412)
                     /locus_tag="VHX39_29780"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX3995384.1"
                     /translation="MPINPANSTPTVASIRIPMAMEAKVCIAGPYRIAGLVSSPRVRE
                     PTWASLHPPKLTSFHVPVWSVRAGHKAIATPAANKARGGNMKRRHIFTTVFAALLGMT
                     LWGTGARAADDTIKIGYIDPFSGAFAAGGDASLKMFQFIVDNVNARGGALGKKFELVT
                     FDDKLQPAEALIALKSVTDQNMPFVMSCVGSNVGAALIDGVNKHNERDPDNRVLLLNC
                     GQLADELTNEQCSFWHFRFAGSVGMRAVARIKSLPKTLKTVYLMNQDYLFGQSIQKDT
                     KKYLAEFRPDIKIVGDEMIPLMQVKDFSPYITKIKASGAESLLTGNYGPDLALLIKAG
                     VDAGLNIRYDTFLGHVIGAPTAIGGAADGRMTSVMEIHDNIAVEEHNAGYEDFVKKWR
                     ATHDFGFIAINSVTQFDMMVRAINAAGSTDPVKVALQLEGMQQKDMLGADNVMRKEDH
                     QLINPYFEAVLTKGQTYDVE"
     gene            1411..1524
                     /locus_tag="VHX39_29785"
     CDS             1411..1524
                     /locus_tag="VHX39_29785"
                     /inference="COORDINATES: protein motif:HMM:NF033233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIG1 domain-containing protein"
                     /protein_id="HEX3995385.1"
                     /translation="MVLGQSPATSNRLMRYRVLLQGATLLLLVIFMSLLRS"
     gene            1586..2491
                     /gene="argB"
                     /locus_tag="VHX39_29790"
     CDS             1586..2491
                     /gene="argB"
                     /locus_tag="VHX39_29790"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEX3995386.1"
                     /translation="MNAPSPAELSAAAERARVLAQALPFLRRYAGATVVVKYGGHAMG
                     EEHLALEFGRDIALLKQVGINPVVVHGGGPQINAMLKRLAIQSTFIDGLRVTDAAMVE
                     VVEMVLAGTVNKYVASLINKAGALAVGVCGKDGNMILARKLTRTKVDPDSHIERALDL
                     GFVGEPAAIDVRVIHALTGGGLVPVIAPVGVDAEGQTYNINADTVASAVAGALRADRL
                     LMLTDVPGVLDKQKNLINSLTLNEVRDRIEDGTITDGMIPKVECCVDAVRQGVRGAVI
                     LDGRVPHACLLELFTEAGPGTLVRR"
     gene            2513..3043
                     /locus_tag="VHX39_29795"
     CDS             2513..3043
                     /locus_tag="VHX39_29795"
                     /inference="COORDINATES: protein motif:HMM:NF025116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEX3995387.1"
                     /translation="MASLILTVIGPDRPGLVRTLAQSVAAHGGSWLESRMARLGGQFA
                     GIVLVDAPEALLDDLRALENQGLRIVVQSGTTEEATTATGTGERWAVEVVGNDRPGIV
                     RDVARVLAEHGANIEELTTGVVSGSFSGETLFRATALVRAPDAASVAAIRSGLEFLGN
                     EMMVDIHPAGDDASPR"
     gene            complement(3129..3704)
                     /locus_tag="VHX39_29800"
     CDS             complement(3129..3704)
                     /locus_tag="VHX39_29800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006558528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein RecX"
                     /protein_id="HEX3995388.1"
                     /translation="MSSGNPSKPHVAPNRPAPDAASLHEAALNYLARYATTEAGLRQV
                     LHRRIDAWARQAAGEDDVQVRVATAKDAVVGVISRLVELGLLNDAAFAENRARGLALS
                     GRSHRAIAARLMAKGIAPDHARAVLPDGELVAALILARKRRIGPFRTAAADHNRELGV
                     LARAGFPRDIAVRALAMPAEEAEEAIREARA"
     gene            3884..>4325
                     /locus_tag="VHX39_29805"
     CDS             3884..>4325
                     /locus_tag="VHX39_29805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019084995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX3995389.1"
                     /translation="MIPALLPNYARADLAFERGEGAWLWTVDGRRLLDFGSGIATASL
                     GHGHPHLVKAIAEQAAKVMHTSNLYRIPQAERLAARLVEATFADSVFFCNSGAEANEG
                     MIKMMRRAMSDSGKPERFRFICFEGAFHGRTLATLAATGNSHYLE"
BASE COUNT          770 a         1346 c         1360 g          849 t
ORIGIN      
        1 ttctcgacgt cataggtctg gcccttggtc agcaccgctt cgaaataggg gttgatcagc
       61 tggtggtctt ccttccgcat gacattgtca gcacccagca tgtccttttg ttgcatgccc
      121 tcaagctgca gcgcgacctt gaccggatcc gtcgagccgg ccgcgttgat cgcccgcacc
      181 atcatatcga attgcgtcac actgttgatc gcgatgaagc cgaaatcgtg tgtcgcgcgc
      241 cactttttca caaaatcctc atacccggcg ttgtgctcct cgaccgcaat gttgtcgtgg
      301 atttccatca ccgaggtcat cctgccgtcc gcggcaccgc cgatcgcagt cggtgcgccg
      361 atcacgtggc caagaaacgt atcgtagcga atgttgagcc cggcatcgac cccggccttg
      421 atcagcaaag caaggtccgg gccatagttg ccagtcaaca atgactcagc gcctgacgcc
      481 ttgatctttg tgatgtacgg cgaaaaatcc ttcacctgca tcaatgggat catttcatcg
      541 ccgacaatct ttatgtcggg acggaattcg gcgaggtact tcttggtgtc cttttgaatc
      601 gactggccga acagataatc ctggttcatc aggtagactg tcttcaacgt tttcggcagc
      661 gatttgatcc gcgccaccgc gcgcatcccg acgctgccgg cgaagcggaa atgccagaag
      721 ctgcattgct cgttcgtcag ctcgtcggcc agctggccgc agttcaacag caggacacga
      781 ttgtcgggat cccgctcgtt atgcttgttg accccatcaa tgagcgccgc gccgacattt
      841 gatccgacgc atgacatgac aaacggcatg ttctggtcgg taacgctctt cagcgcgatg
      901 agcgcctcag cgggctgtag tttgtcatca aaggtgacga gctcgaactt cttgccaagc
      961 gcgccgccgc gggcgttgac gttatcgaca atgaactgga acatcttcag gctggcgtcg
     1021 ccacccgcgg cgaatgcacc ggaaaacgga tcgatgtaac cgatcttgat ggtgtcgtca
     1081 gcggcgcgcg cgccggttcc ccacaaagtc attcccagca atgccgcgaa aaccgtagtg
     1141 aaaatgtgcc gccgcttcat gtttcctccc cgagccttgt tggctgctgg cgttgctatc
     1201 gccttgtgtc ctgctcgaac tgaccatacc gggacatgaa aagaagtcaa tttaggcgga
     1261 tgtaagcttg cccaggtcgg ctcgcgcacg cggggggatg aaaccagccc ggcgatcctg
     1321 tagggtccag cgatgcacac cttcgcttcc atcgccatcg ggatcctgat gctcgccacg
     1381 gtcggcgtgc tgttcgccgg gttgatcggc atggtattgg gccaaagtcc ggccacctcg
     1441 aaccggctga tgcgctatcg cgtgctgctg cagggtgcga ccttgctgtt gctggtgatt
     1501 ttcatgagcc tgctgcggtc ctgacccggc cggtcttgcc ccacaccgct tgaccccaat
     1561 tcgcgcaccg ctttaggtgc ccgttatgaa cgccccatcc cctgccgagt tgtccgccgc
     1621 cgccgagcgc gcccgtgtcc ttgcccaggc attgccgttt ttgcgtcggt acgccggggc
     1681 aacggtggtg gtgaaatacg gcggccacgc catgggcgag gaacacctgg cactggaatt
     1741 cggccgcgat atcgccttgc tgaaacaggt cgggatcaat cccgtcgtgg tgcatggcgg
     1801 cgggccgcag atcaacgcga tgctgaagcg gttggcgatc cagtccacct ttatcgacgg
     1861 gctgcgggtg accgacgcgg ccatggtcga ggtggtggaa atggtgctgg ccggcaccgt
     1921 caacaaatac gtcgcctcgt tgatcaacaa agccggcgcc ctggccgtcg gggtttgcgg
     1981 caaagacggc aacatgatcc tggcacgcaa gttgacccgc accaaagttg accccgactc
     2041 ccacatcgaa cgcgccctcg acctggggtt tgtcggtgag cctgcggcga ttgatgtgcg
     2101 cgtgatccat gccctgaccg gcggcgggct ggtgccggtg atcgcgccgg ttggcgtgga
     2161 tgccgagggt cagacctata acatcaacgc cgacaccgtg gcctcggcgg tcgcgggcgc
     2221 cttgcgtgcc gaccggctgc tgatgctgac cgatgtgccc ggcgtgctgg acaagcaaaa
     2281 gaacctcatc aactcgctga cgttgaatga agtgcgggat cggatcgagg acggcaccat
     2341 caccgacggc atgattccga aggtggaatg ttgtgtcgat gcggtccgcc agggtgtaag
     2401 aggggccgtc attctcgacg gccgcgtccc ccatgcctgc ctcctcgaat tgttcaccga
     2461 ggctgggccg gggaccctgg tgcggcgcta acgaccggag gaccagctcg tcatggcgtc
     2521 cctgatcctg accgtcatag gcccagaccg gccgggactg gtccgtacat tggcccaatc
     2581 ggtggcggcg catggcggca gttggttgga aagccgtatg gcacgcctcg gcgggcaatt
     2641 cgccggcatc gtgttggtcg acgcgcctga ggctctgttg gacgatttgc gcgcgctgga
     2701 aaaccagggg ctgcggattg tcgttcagtc cggcacaacc gaagaggcca ccaccgcaac
     2761 cgggacaggc gaacgttggg cggtcgaagt ggtggggaat gatcggcccg gcattgtgcg
     2821 cgacgtggca cgcgtgctgg cagagcacgg ggcgaatatt gaggaactga cgaccggcgt
     2881 ggtcagcggc tcgtttagtg gcgagacttt gttccgcgcg actgctctgg tgcgcgcgcc
     2941 agacgcagcg tcagtcgccg caatccgctc ggggctggag tttctgggta acgaaatgat
     3001 ggtcgatatt cacccggccg gggacgacgc gtcgccgcga tgaaccgggt tccgatttag
     3061 tgtcgctgca gcggcacggc cgaaccatca accggccggg gtgctttcat ttgtaatcga
     3121 ccagcgtttc aggcgcgggc ttcgcggatc gcttcctcgg cctcctcggc cggcattgcc
     3181 aaagcccgga ccgctatgtc gcggggaaat cctgcccgag ccaacacgcc aagctcccgg
     3241 ttatgatccg ccgccgccgt ccgaaacgga ccgatccgcc gtttgcgcgc gaggatcaat
     3301 gcggcgacca actccccgtc cggcagcacc gcgcgggcgt ggtccggcgc gatccctttg
     3361 gccatcagcc gcgccgcaat ggcccgatgc gagcgtccgc tcagcgccaa cccgcgcgcc
     3421 cggttctcgg cgaacgctgc gtcgttcagc agaccgagtt caacgaggcg gctgatcaca
     3481 cccacgaccg catccttcgc tgtggccacg cgcacttgaa cgtcgtcctc acctgccgcc
     3541 tggcgtgccc aggcatcgat ccgccggtgc aacacctgac gcaggcctgc ctcagtcgtt
     3601 gcgtagcggg caaggtaatt cagtgcggcc tcgtgaagcg atgcagcatc cggtgccggc
     3661 cggttcggcg caacgtgcgg tttggatggg ttgccggagg acatgcggcg acgatgccac
     3721 gccgcgcctt gccggcaaac tgccgtgtga ccgcaaaccg tcaccgcgag gcgtttgaca
     3781 ttgtcccacg ggctggcgaa agatgtttgc ttccgtggag cccgccccga atggtcgcgg
     3841 gtgggtggcc cattggaagc aacgcaacca tggtcaaaaa atcatgatac ccgctctgtt
     3901 accgaactac gcacgtgccg acctcgcctt cgagcggggc gagggcgcct ggctgtggac
     3961 ggtggacggg cgacgactgt tggatttcgg gtcgggcatc gctacggcct cgttggggca
     4021 tggccatccg catctggtga aagcgatcgc cgagcaggcc gccaaggtga tgcacacctc
     4081 caacctgtat cgcattccgc aggcggaacg gctggcggcg cggttggtcg aggcgacgtt
     4141 tgccgacagc gtgttcttct gcaactcggg cgccgaggcg aacgagggca tgatcaagat
     4201 gatgcgccgc gcgatgtcgg attccggcaa accggaacgg ttccgcttca tctgcttcga
     4261 aggcgcgttc cacggtcgca cactcgccac gctggccgcg accggaaaca gccattacct
     4321 ggaag
//
LOCUS       DATAVD010001552         4472 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3308396, whole genome shotgun sequence.
ACCESSION   DATAVD010001552 DATAVD010000000
VERSION     DATAVD010001552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4472
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3308396"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            135..2534
                     /locus_tag="VHX39_29810"
     CDS             135..2534
                     /locus_tag="VHX39_29810"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX3995390.1"
                     /translation="MLRVVGCITQDHDLRLVALACLMCLLATHTSVRLLRPRYRAEQL
                     ASTIHTSTAIIVFGVGVWTTHFISMLAFRPDIPVSFSLPLCILSLVLAIAGATIAYAI
                     RPREPDDKVAIIASGLVLAAGIGAMHFLGMRSLIVPGIIRYDADLVFASLFLGSLFSI
                     AAFSALTRRAIWLASLLFGLAVASIHFIAMGAVRLELIGGMDVPPLAVTRTYLVMAAA
                     GACLLILTLAIAAAALDQHFTGRLAAEARRFRALADATFEGLIFEQDGQIVDLNRAMC
                     ELAGTDAASLVGRPLSDLIPGLELRSAELKGAVEYDVRLPDGQTLPVEILWRSGADRD
                     ERVVAVRDISRQKAAEGRIERMVRYDPLTGLANRELFEQQLQRALALSDRSSIGVALL
                     YIDLDRFESVNEVLGHHATSQILIQTAQRLTATVRETDTVARVGRDEFVIIQSFTDQS
                     AGAAPLADRIVSEMALPFTIDDQSVVVTASVGVALYPVDGAVPRDLIKNAALAVRQAK
                     HDGRARWCYFETGMELLLRTKRSLEHDLRIAIQENQLSLNYQPFVDTTTLDIIGYEAL
                     LRWEHPERGNIPPADFIPLAEECGLIVPIGSWVLATACAETVSWDQKPIISVNLSPAQ
                     FLQPGIVATVADVLKQTGLPPKRLELEITEGTLMADTQNALRILTSLKGLGVKLAMDD
                     FGTGYSSLSYLRKFPFDKLKIDRSFISDLEDDTEAETIVQAIIAMSRSLRLDVTAEGV
                     ETKRQLSMLRALGCNFVQGYLLGRPRTAAQVEHQIGKPRWHIIDHDGPRLVTTSSARS
                     A"
     gene            complement(2821..3573)
                     /locus_tag="VHX39_29815"
     CDS             complement(2821..3573)
                     /locus_tag="VHX39_29815"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014457234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX3995391.1"
                     /translation="MRLQDKVAIITGAASGMGAATARRFGREGAKVVIADMLEEEGRA
                     VADSVNAAGGKAVFMALNVTDEAGWKTVVDHTVAAYGKLDILVNNAGISGSATNDLLD
                     SELWGRVMAVNSTGVFLGTAAAVRQMQKNGGGSIVNLSSISGVVGQTMVHMSYNAAKG
                     AVRIMTKSTAVQFGKDGIRCNSVHPGLMPPMRTSGATADPVVRAKMLRAVPLGRNGEV
                     DEVANAILFLASDEASYITGAELYVDGGYLAM"
     gene            3562..>4472
                     /locus_tag="VHX39_29820"
     CDS             3562..>4472
                     /locus_tag="VHX39_29820"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3995392.1"
                     /translation="MQTHGCSLLLPWLTRLCHCRRPLATGRYLRQIEDSFIGARPMAH
                     RGLTFGIFLAPFHRLGENPTLAIARDVELIQWLDHLGYDEAWVGEHHSAGWEVIASPE
                     LIIAAAAEKTKHIKLGSGVTSLPYHHPFLVAQRWVQLDHMTRGRAMLGCGPGALTSDA
                     YMLGIQPATQRPRMLESMDAIMRLLKMEERVTIKTDWFEMNDAKLHLAPYSDPHFEIA
                     VASTITPFGMIAAGTHGTGVLSIGAGLPGGPEAMASQWKIAEEHAAKNGKTVSRKKWR
                     IVVNAHIAEDDEQALDEVRRGERNETI"
BASE COUNT          814 a         1430 c         1389 g          839 t
ORIGIN      
        1 catcggtacg ctgaccttcc gcatgctgat ctatcagttt tcaggacgtg aaatcatgcg
       61 gaatcgtgcc aaatgttaac tgtctggtaa ccctttacaa ccgatgatcg ccctctctat
      121 cgaggggact actcatgctc cgggtcgtcg gatgcatcac ccaggatcat gacctaaggc
      181 tggtcgctct ggcttgcctg atgtgcctgt tggcaacgca caccagcgtc cgcctgctca
      241 ggcctcgcta tcgtgcggag cagttggcca gcacgatcca caccagcacc gccatcatag
      301 tcttcggcgt cggcgtgtgg acgacgcatt tcatcagcat gctggccttc cgtcccgata
      361 ttccggtcag cttcagccta ccgctttgca tcctatccct ggttctcgcg atcgcgggcg
      421 cgaccatcgc ctatgcgatc agaccgaggg agcccgacga caaggtggcg atcatcgcca
      481 gtgggcttgt tctggcggcg ggaatcggcg cgatgcactt cctgggcatg cgctctctca
      541 ttgtgcccgg cattatccgc tacgacgccg atctcgtctt cgcctcgctg tttctgggca
      601 gcctgttttc gatcgccgcc ttctcggcgt tgacacgacg ggcgatctgg ctggcttcat
      661 tgcttttcgg actcgccgtt gcctcaatcc atttcatcgc catgggggcg gtcaggctgg
      721 aattgatcgg cgggatggac gtgccgccgc tcgccgttac caggacttac ctggtgatgg
      781 cggcggccgg tgcctgcctc ctgatcctga ccctggccat cgccgccgcg gcactcgacc
      841 agcactttac cgggcggctc gccgcggagg cacgccggtt ccgagccctg gcggacgcga
      901 ccttcgaagg cctgattttc gagcaggacg ggcagatcgt cgatctcaac cgcgcgatgt
      961 gcgaactggc gggaaccgac gccgcatcgc tggtcggccg gccgctgtcg gacctgattc
     1021 cgggactgga attgcgcagc gccgaactca agggcgcggt cgaatacgac gtgcgtctgc
     1081 ccgacgggca aaccctgccg gtggagatac tgtggcgtag cggcgccgat cgcgatgaac
     1141 gtgtggtggc ggtgcgtgac atctctcgcc agaaagccgc cgaaggcagg atcgagcgga
     1201 tggtgcgcta cgatccgctg actggcctgg ccaaccgcga actgttcgag cagcagttgc
     1261 aacgcgccct tgccttgtcc gaccgctcat caataggggt cgccctgctc tacatcgatc
     1321 tggaccgctt cgagtccgtg aacgaagtct tggggcatca tgcgacaagc caaatcctga
     1381 tccagacggc acagcggttg accgccaccg tccgcgaaac cgacaccgtc gccagagtcg
     1441 gccgggacga attcgtcatc atccagtcgt tcaccgatca atccgccggc gcggcgccgc
     1501 tggccgatcg catcgtgtcc gaaatggcgc tgcccttcac gatcgacgat caatcggtcg
     1561 tcgtaaccgc gagcgtcggt gtcgcactct atcccgttga tggagcggtg ccgcgggatc
     1621 tgatcaagaa cgccgcgctg gcggtgcggc aggcgaagca tgacggccga gcgaggtggt
     1681 gctatttcga aacgggtatg gaactgctgc ttcggacaaa gcggtcgctg gagcacgatc
     1741 tgcgcatcgc gatccaggaa aaccagctca gcctgaacta ccagccgttc gtcgatacga
     1801 cgacacttga tatcatcggc tacgaggcgt tgctgcggtg ggagcacccg gagcgtggca
     1861 atattccacc ggccgatttc attccgctgg cggaggaatg cggcctgatc gtgccgatcg
     1921 gaagctgggt gctcgcgacc gcctgtgccg agaccgtgtc ctgggaccag aagccgatca
     1981 tctcggtgaa cctttcgccg gcgcagttcc tgcagcccgg catcgtggca acggtggccg
     2041 atgtgctgaa gcagaccggc ctgccgccga aacgtctgga gctggagatt accgaaggca
     2101 cgctgatggc cgacacccag aacgccttgc ggatcctgac ctcgctgaag gggctcggcg
     2161 tgaagcttgc gatggacgat ttcggtaccg gctattccag cctcagctac ctaaggaagt
     2221 tcccgttcga caagctgaag atcgaccgca gtttcatcag cgacctggaa gacgataccg
     2281 aagccgagac catcgtgcag gcgatcatcg cgatgagccg cagcctgcgc ctggatgtca
     2341 ccgccgaggg ggtggagacg aagcggcagt tgtccatgtt gcgggcgtta ggctgcaact
     2401 tcgtccaggg ctacctgctg ggacggccgc gcacggccgc ccaggtggag catcagatcg
     2461 gcaaaccacg ctggcatatc atcgatcacg acgggccgcg cctggtgacg acatcgtcgg
     2521 cgcggtcggc gtagcatcgc gcatcagcga agcgcgatac gtcgcggttt tgtctgatac
     2581 caatcgccct tgatgttgac ccatcggcac cgccatgcag ccgtcatggc gagctcgcca
     2641 tccatgcctt tgtttccgct cgtaaaaggc gtggataccg gcatgcgccg gtatgacgga
     2701 cggggtcaac cgaagagtct gcatcaacgc cggctggtat gagtgaccga ttcacgcagg
     2761 aaatcgcggt cacctcgtga ctcgcgcttt accgcgatcg ggcactaacc gcggtcccgc
     2821 ctacatcgcc agatagccgc catcgacata aagttcggcg ccggtgatgt aggatgcctc
     2881 atccgacgcc aggaacagga tggcgttggc gacctcatcg acctccccgt tgcggcccag
     2941 cggcacggcc cgcagcatct tcgctcgtac caccggatca gcggtcgcgc cggaggtgcg
     3001 catcggcggc atcagcccgg gatgcacgga gttgcaacga attccgtcct tgccgaactg
     3061 aacggcagta gacttcgtca tgatccgcac cgcacccttc gcggcattgt agctcatgtg
     3121 caccatggtc tggccgacca caccggaaat ggacgacagg ttgacgatcg acccgccacc
     3181 gttcttttgc atctgccgca ccgccgcggc cgtccccaaa aacacgccgg tgctgttcac
     3241 cgccatcacg cgtccccaaa gttcggaatc cagcaggtcg ttggtggcgc tgccgctgat
     3301 gccggcgttg ttcaccagga tgtccagctt gccataggcc gcgacggtat ggtccaccac
     3361 ggttttccac ccggcttcgt cggtcacgtt caacgccatg aacaccgcct tgccgcccgc
     3421 cgcgttgacg ctgtcggcga ccgcccggcc ttcttcctcc aacatgtcgg cgatcacgac
     3481 cttcgcgccc tcccgcccga aacgccgagc agtcgcggct cccatgcctg acgcggcacc
     3541 ggtgatgatg gcgaccttgt cttgcagacg catggctgtt ccctcctttt gccgtggttg
     3601 acccgactct gccactgccg ccgccccttg gctaccggcc ggtatttgag gcagatagaa
     3661 gacagtttca ttggagcacg acccatggcc catcgcggct tgacctttgg catcttcctc
     3721 gcccccttcc accggctggg cgagaacccg accttggcca tcgcccgcga cgtggagctg
     3781 atccagtggc tggatcacct gggatatgac gaagcctggg tgggcgagca tcactcggcc
     3841 ggctgggaag tgatcgcgtc gccggaactg atcatcgccg cggcggccga gaagacgaag
     3901 cacatcaagc tgggatcggg cgtaaccagc ctgccctatc atcatccgtt cctggtggcg
     3961 cagcgctggg tgcagttgga tcacatgacc cgcgggcggg cgatgctggg ttgcgggccg
     4021 ggcgcgctga cgtcggatgc ctacatgctg gggatccaac cggcgacgca gcggccgcgc
     4081 atgctggagt cgatggacgc gatcatgcgg ctgctgaaga tggaggaacg cgtcaccatc
     4141 aagaccgact ggttcgagat gaacgacgcg aaactgcatc tcgcacccta cagcgacccg
     4201 catttcgaga tcgccgtggc gagcacgatc acgccattcg gcatgatcgc ggcgggaact
     4261 cacgggaccg gtgtgctgtc gatcggcgca ggattgccgg gtgggccaga agcgatggcc
     4321 agccagtgga agatcgccga agaacatgcc gccaagaacg gcaagacggt cagccggaag
     4381 aagtggcgga tcgtggtgaa cgcccatatc gccgaggacg atgagcaggc attggacgag
     4441 gtccgtcggg gcgagcgcaa cgagacgatc ag
//
LOCUS       DATAVD010001553         3260 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2194651, whole genome shotgun sequence.
ACCESSION   DATAVD010001553 DATAVD010000000
VERSION     DATAVD010001553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3260
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2194651"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..243
                     /locus_tag="VHX39_29825"
     CDS             <1..243
                     /locus_tag="VHX39_29825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995393.1"
                     /translation="SANTPKLRIDLLGGCSAGLEGDGPRILPTRKSQALLAYLAVPAG
                     RFHTREKLTTMFWRSHLKRRQRIAGESTTMVPRGPG"
     gene            complement(774..1679)
                     /locus_tag="VHX39_29830"
     CDS             complement(774..1679)
                     /locus_tag="VHX39_29830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008892342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3995394.1"
                     /translation="MQNLELVLIFITVAEMGSFTRAASSLGIQKGRASMAVRKLEEDV
                     GVRLLHRTTRSVQLTEDGRAFHARARDLLAEVDDLHSMFAGDRVALRGRLRVDLPTEV
                     ARTTIVPALPDFMATHPELELEVSSTDRQVDLVQEGFDCVLRLGPIRDETLIARPLGL
                     LRVVNAASPAYLARYGIPRSLEDLQRQEHRSIHFTTMLGARPYGWEYPDGDSYATLQL
                     PGALHVNSAQTYEAAALAGLGLIQAPLLGIGRYLESGTLVEIMPDLRRRALPVSLVVA
                     HRSNLSRRVRAFMKWIEGVLTPYLE"
     gene            1799..2221
                     /locus_tag="VHX39_29835"
     CDS             1799..2221
                     /locus_tag="VHX39_29835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008892344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX3995395.1"
                     /translation="MSETVSLHLVPETTTLHRALRAGRIMSAIVVVALVVDGTVQLFV
                     PAQIASMLQETGFAMDLTRVVGPIILACAILYAIPATAVLGAILVTGVLGGAICAHVR
                     IGELGSPPEIISLLLGAMTWGGLYARDPRIRAILPLIR"
     gene            2267..3139
                     /locus_tag="VHX39_29840"
     CDS             2267..3139
                     /locus_tag="VHX39_29840"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA family NAD(P)-binding protein"
                     /protein_id="HEX3995396.1"
                     /translation="MFLVMGITGKVGGATAEHLLAHGKEVRALVRNRDKASSWANQGV
                     ELVDGDWNDSAAIEQALKGVEGAFVMLPAVWAPSLDYKEAKGVIANYVEALTKAAPPR
                     VVALSSMGANRTSGIGMITALSLLEQGFRDLISPIAFVRAGGFFENFLYGLQVAQGGT
                     LPVYYNPTNRKSTMVATNDIGAEVATLLTGSAWSGQRVVELGSMVTADEVAAQLGEVL
                     NLDVRAFAVPRAGWAEAFEQFGIPKGQTGPAEEMFEAVNAGWMDLGVEGTEHVAGTTS
                     ARDVFEAAQTAAKA"
BASE COUNT          674 a          945 c          980 g          661 t
ORIGIN      
        1 tcggccaaca cgcccaaact ccgtatcgac ctgctcggcg gctgctcggc cggcctggag
       61 ggggacggcc ctcgcatcct gccgacaaga aaatctcagg ccctgctcgc gtatctggct
      121 gtgccggcag gacgtttcca cacgcgggaa aagctgacca cgatgttttg gcgaagccat
      181 ttgaaaagac ggcaacgaat agcaggtgaa tcgacgacga tggtgccgcg aggtccagga
      241 tgatcgttga tttcgcctcg atcgtcgttc gggttccgaa gcaggattcg atgtaattct
      301 tgcacgcatg taaatcggcg tcgctcgcaa tactcccgag actttgagac ggagccgacg
      361 gtaccgttgg gattggagcg ggtgacggga atcgaaccct cgtgttcagc ttggaagtct
      421 agaaatattg tagtgttttg agcggccatt ctgacatttt cggcattttg gtccgctgcg
      481 atcattattg tcagaatgat cgtgggctgc ttttggcatt gttgtgaacg tcgtttctgt
      541 accgggttgg ggtgatcgga ctggtttgct tacctgtcga ggtcgaccca cacggccgta
      601 tgctcggacc cagcatctcc ggatacccaa ttcctcagtg accgaatttc ccaattggcg
      661 ggccattcga tgagtcaggc acgctgtcga acacgtaccc ccactgcaac cgccgcccac
      721 agacataact tcggaatgtt gatttcgagg gccggacgaa gacgttcgtc tcgctattcc
      781 agatacggcg tcagcacacc ttcgatccat ttcatgaatg cgcggacccg gcgcgacaga
      841 ttgctccgat gtgctacgac gagcgacacg ggcagcgccc ggcgacgaag atcgggcatg
      901 atctccacaa gcgttccact ctccaagtat cggccaatcc ccaagagtgg tgcctgaatc
      961 aggccaaggc cggcgagggc agcggcttcg taggtctgcg cgctgttgac gtgtagcgca
     1021 cctggcaact gaagtgtcgc gtagctgtcg ccgtccggat attcccatcc atagggtctc
     1081 gcgcccagca tcgtcgtaaa atgaattgac cgatgttcct ggcgctggag atcttccagc
     1141 gatcgaggga taccatagcg cgccagatag gcgggactgg cagcgttgac tacgcgcaac
     1201 aggcccagtg ggcgcgcaat cagcgtctcg tcccgtatgg gtccaagccg caatacacag
     1261 tcgaacccct cttgaaccag atcgacttgc cgatccgtac tcgacacctc gagctccaac
     1321 tcggggtgag tcgccatgaa atccggcaac gccggcacga tcgttgtgcg cgccacctca
     1381 gtcggcagat caacccgtaa acgcccccga agtgcgacgc gatcgcctgc gaacatcgag
     1441 tgtaggtcat cgacttcagc aagcagatcg cgggcacgcg catgaaatgc gcgtccgtcc
     1501 tccgtcaact gcacgctgcg cgtcgtccgg tgcaggagcc tgacaccgac atcttcctcg
     1561 agcttccgga ccgccattga ggctctcccc ttttggatgc ccaggctact ggccgcgcga
     1621 gtgaagctcc ccatttccgc gaccgttatg aaaatgagaa cgagttcgag attctgcatg
     1681 ttcgtgcctc ggtattgttc aacacagaga gaacagtgag ttcatttcct cggtgtttat
     1741 catgcccaag acacacagta agttccgaac atgcaatcca cccatcggag aatgacaaat
     1801 gtccgaaact gtgagcctgc atttggtgcc tgaaaccacg accttgcatc gcgccctgag
     1861 ggcgggccgg ataatgagcg cgattgtcgt tgtcgctctg gtggtagacg gcactgttca
     1921 acttttcgtg ccagcacaga tcgcgagcat gttgcaggaa accggtttcg cgatggacct
     1981 gacccgtgtc gtgggtccga tcatactcgc ctgcgccatc ctttacgcca tcccggccac
     2041 cgccgtcctc ggcgcgatcc tggtgacggg cgttctgggg ggtgccatct gcgcccatgt
     2101 ccgcattggt gagttggggt caccgccgga aatcatttcc ctgcttctgg gcgcgatgac
     2161 atggggcggc ctctacgcgc gcgatccccg aatccgggcc attctgccgc tcatccgttg
     2221 aaccaacagg ggcagtgccc tgtccctcaa gatcaggaga aaacgcatgt tcttagtaat
     2281 gggaatcacc ggaaaagtgg gcggcgcaac ggcagaacat ctgttggcgc acggcaagga
     2341 agtacgcgcg ctggtccgca atcgcgacaa ggcgtcaagc tgggcgaacc agggcgtgga
     2401 actggttgac ggcgattgga atgattccgc agccatcgag caagcgctca aaggcgtcga
     2461 aggcgcgttc gtcatgttgc cggctgtctg ggcgccctcg ctcgattaca aagaagccaa
     2521 gggcgtgatt gcgaactatg tcgaggcgct caccaaagca gcgccgccgc gggtggtagc
     2581 gctttcgtcg atgggtgcga acaggaccag cgggatcggg atgatcacgg ccttgtcgct
     2641 tctggagcaa ggttttcgcg acctgatatc gccaatcgca tttgtgcgcg caggtggatt
     2701 cttcgaaaac ttcctctacg gtttgcaggt cgcccagggc ggaacgctac cggtctacta
     2761 caatccgaca aaccggaaat cgaccatggt cgcgacgaac gacatcggcg cggaggtcgc
     2821 gactctcctg accgggtcag cgtggtcggg tcagcgcgtc gtcgagcttg gttcaatggt
     2881 caccgcggac gaagtcgcgg cgcaattggg tgaagtcctg aatctcgacg tgagagcctt
     2941 cgcggtcccg cgtgcggggt gggcggaagc gttcgagcaa ttcggcatcc cgaagggcca
     3001 aaccggaccg gccgaagaaa tgtttgaggc cgtgaacgcg ggatggatgg acctcggagt
     3061 cgagggtacg gagcacgtag ccggtacgac gtcggcgcgc gatgtattcg aggctgcaca
     3121 gaccgccgcc aaggcgtaag tcacggggca agcaatatga acgctgacca cacaatagat
     3181 aaacccgcgc gggcaggtcg agcaactcaa atagccgcga tggtaataac cggccttgtc
     3241 gccttcatct gggtgtactt
//
LOCUS       DATAVD010001554         1541 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2940993, whole genome shotgun sequence.
ACCESSION   DATAVD010001554 DATAVD010000000
VERSION     DATAVD010001554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2940993"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            74..961
                     /locus_tag="VHX39_29845"
     CDS             74..961
                     /locus_tag="VHX39_29845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3995397.1"
                     /translation="MIQIPTGQIPGVYHRRIGDIVVTALSDGYLDGTVEVLQNITRDD
                     AQGLLDAQFRPGRRTSVNCYLIYSAGRLALVETGSGDYLLPTAGKLQQNLKAAGVDPA
                     DIDTVVLTHMHPDHSAGLTDPKTGRKFFPNAELVVHENEPKHWRDDGAMSRASERAKK
                     LYFQCAREQIAPYHNVTRTFARAEEVFPGITSVPLHGHTPGHSGYMVSSGKDSLLIWG
                     DIIHVPEIQVPRPEVTIEFDTDPHQAAATRKRTFDMVVTDRQLIAGMHVHFPGFAYLV
                     RDGERYRMLPELWDQAFGS"
     gene            958..>1541
                     /locus_tag="VHX39_29850"
     CDS             958..>1541
                     /locus_tag="VHX39_29850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HEX3995398.1"
                     /translation="MTPGLLLASAVAGGAYTLAPGPAFLALLGIGAGSGRRAGAWFLA
                     GHFAGDISWAALALVAIIGAKTIGTTIFSVLDLVCGVYLCWLGYRAVTTRRQPNGTTT
                     FVPRRPFRRGLAFGMSNPKAYPVAVAMFTALLAGHAAVLDWTALPSLLAAACVGFVTA
                     DAILITIIGAGPVRRWYRRHALWVTRASGVIFLG"
BASE COUNT          278 a          465 c          467 g          331 t
ORIGIN      
        1 tcctgttcgg ccagacggcg aaatcactga gtggcgcagc gtaatagctg acgccgacca
       61 aggagcctgc attatgatcc agatccccac cggacaaatc ccgggtgtct accaccgtcg
      121 tatcggcgac attgtcgtaa ctgcgctgtc ggatggctat ctggacggta cggtggaggt
      181 tttgcagaac attacgcgcg acgatgcaca aggcttgctg gacgctcagt tccggccagg
      241 ccgccgcact tcggtcaatt gctacttgat ctattccgca gggcgcctcg ctttggttga
      301 gaccggctcg ggcgactatc tgttgcctac ggccggtaag ctgcaacaga acttaaaagc
      361 cgccggcgtg gatccggccg acatcgatac cgtggtgctc acccatatgc atccggatca
      421 ttccgctggg cttaccgatc cgaaaacagg ccgcaagttc ttccccaatg ccgaacttgt
      481 cgtgcatgaa aatgaaccca aacattggcg cgacgatggc gccatgagcc gcgccagcga
      541 gcgggcgaag aaattgtatt tccagtgcgc tcgcgaacag atcgcaccat atcataacgt
      601 cacccgcacg ttcgcccgcg ccgaggaggt gtttcccggc atcacctcgg tgcccctgca
      661 tgggcataca ccggggcata gcggttatat ggtcagttcc gggaaggatt cgttgctgat
      721 ctggggcgat atcatccatg tgccggaaat tcaggtgccg cgccccgaag tcaccatcga
      781 gttcgatact gatccgcatc aggcggcggc aacccgtaaa cgcacattcg acatggtcgt
      841 caccgatcgg cagctgattg ccgggatgca tgtgcacttc ccaggatttg cttatctcgt
      901 acgtgacggg gaacgttatc gcatgctgcc ggagctttgg gatcaggcgt tcggcagttg
      961 acaccaggac tgctgctcgc gtccgccgtc gccgggggtg cctacacgct ggcacctggc
     1021 ccggcgttcc tcgcgttact cgggattggc gcaggcagcg ggcggcgcgc cggcgcctgg
     1081 ttcctcgccg gacatttcgc cggcgacata tcctgggcgg ctctggcgct ggttgcaatt
     1141 atcggggcca aaacgatcgg cacgactatc ttcagcgtgc tggatctggt ttgcggcgtg
     1201 tatctgtgct ggcttggcta tcgcgcggtg acaacgcgac ggcaacccaa tgggacgaca
     1261 acctttgtgc cgcgtcgccc tttccgtcga gggcttgcct tcggaatgtc gaacccaaag
     1321 gcgtatccgg ttgcagtcgc gatgtttact gcgctgctcg ccggtcacgc agccgtgctg
     1381 gattggacgg cgttgccatc cttgcttgcc gcagcgtgcg tcgggtttgt cacggcggat
     1441 gcaatactga taacgatcat cggcgcagga ccggtacgtc gatggtatcg ccgccacgcg
     1501 ctctgggtca cgcgcgcatc tggcgtcatc ttccttggct t
//
LOCUS       DATAVD010001555         4943 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1265003, whole genome shotgun sequence.
ACCESSION   DATAVD010001555 DATAVD010000000
VERSION     DATAVD010001555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4943
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1265003"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..347)
                     /locus_tag="VHX39_29855"
     CDS             complement(<1..347)
                     /locus_tag="VHX39_29855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX3995399.1"
                     /translation="MRNILTIADRELAAYFATPVATVFIVIFLVLQGTLTFNLGNFFD
                     RGQADLNPFFNFLPWVFLLLVPAITMRLWAEERRLGTIELLLTLPITQSQAVIGKFLA
                     AWAFCAIALVLTFP"
     gene            complement(350..1111)
                     /locus_tag="VHX39_29860"
     CDS             complement(350..1111)
                     /locus_tag="VHX39_29860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3995400.1"
                     /translation="MSDAGLNADGGAPLIEIEGLTKRFGTFTAVDNVTFSVGRGEVVG
                     FLGPNGAGKSTTMRMLAGFMIPTEGAARIMGHDVQTDGVAARRALGFLPEGAPTYGEM
                     SVTGFLRFCARIRGYRGADLQDRVVYAIGLTRLESVRLQPVETLSKGFKRRVGLAQAL
                     LHDPPVLVLDEPTDGLDPNQKRGVRALITQMRPEKAIIISTHLLDEVEAVCTRAIVIA
                     AGKVVVDATPADLCEMHPSGKLDDVFRQLTMEAAA"
     gene            1316..1642
                     /locus_tag="VHX39_29865"
     CDS             1316..1642
                     /locus_tag="VHX39_29865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011930635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HEX3995401.1"
                     /translation="MIYELRIYECVPGKLPDLNKRFSTITLKLWEKHGIKQTGFWTTV
                     IGESSQTLYYMLAWESLAEREKKWAAFGADPDWTTARAKTEENGPIVANVKNFILAPT
                     PYSSVK"
     gene            1706..2749
                     /locus_tag="VHX39_29870"
     CDS             1706..2749
                     /locus_tag="VHX39_29870"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEX3995402.1"
                     /translation="MARLILTGDVNLMNVTDPAVPFRRVAAEFRAADMVFSNLECCLY
                     APPKAHSFHNEGFYANPAIAAAALQAAAIGSVGIANNVNYGDAAILNSIAALDQAGIP
                     HSGAGVDQAAARAPVIVERGGIRFGFLQRSSVYWPTNHAAGEHDPGIAVIRAHTAYQV
                     PMHKTRPEIPPMNRPGIPPIVVTWPDQDSLRAFTDDITSLRSHADIVVASCHWGLGKD
                     TLSYMRDIGRAAIDAGADIVIGHGPHYSLAVEVHRGKPIFYGLGSFSFHTGHGGRAHG
                     NWVGMMVRADVTRDGISAARFQFVRHNAANETVLCALADEAAEFADIVKRSAEYGTRL
                     EPAGNEVNVILGD"
     gene            complement(2753..3550)
                     /locus_tag="VHX39_29875"
     CDS             complement(2753..3550)
                     /locus_tag="VHX39_29875"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX3995403.1"
                     /translation="MCLCRYTGLGRRGFLACALAATAVSHAVAAEPADPALIDDLVSA
                     NRILYDQGVVDGFGHVSARHDKDPGRYLLSRSMAPALVTAADIMEFDLDSNPVDPRGR
                     TPYLERFIHGEIYRVRPDVMAIVHSHSPAVLPFADTDVKLRPMNHIAGFLGDGPPVFE
                     IRTVAGQDSDMLVRNNAIGQALAKTLGNGSVALMRGHGSVAAAQSVKHVVFRAIYTEV
                     NARTEIQALAIGKPMFLNEKEAAAAMKTNDGLVERPWALWKQKVMAK"
     gene            3665..4225
                     /locus_tag="VHX39_29880"
     CDS             3665..4225
                     /locus_tag="VHX39_29880"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HEX3995404.1"
                     /translation="MDALDLLLTRESALKLDAPAPSEADLDTMFQSAVRAPDHGRLRP
                     WRFVVIEGDKRVRLGELMADAMRNREPDVSADMLDRERAKPMRAPTIVVAAARVQKGH
                     RIPEFEQIAAAAAATQNIMLAAHALGYGAMWKTGEPAYDSSVKTALGLNADDEIMGFL
                     YLGTNTGASSPAPRPAARDQVTVWAG"
     gene            complement(4239..>4943)
                     /locus_tag="VHX39_29885"
     CDS             complement(4239..>4943)
                     /locus_tag="VHX39_29885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007091164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HEX3995405.1"
                     /translation="HTLAMTELDLNSAHLAAEIDAQGYAVRKALDAEGCRDVARMWDE
                     EARFRKRIIMQQHAYGRGEYRYLAYPLPEPVARLRQALYPPLAELANGWRRTLGQAGE
                     FPPTLPEFIEQCHAAGQTRPTPLMLRYGPGDFNCLHQDLYGEMVFPLQVVILLSEPGR
                     DFTGGELLLVEQRPRAQSRAEIVPLGLGDAAIFPVHHRPARGTKGPYRLTMRHGVSRV
                     RSGDRQTLGVIFHDAA"
BASE COUNT          991 a         1542 c         1533 g          877 t
ORIGIN      
        1 ggaaacgtca gcaccagcgc gattgcgcaa aaagcccagg cggcgaggaa tttaccgatg
       61 acggcctggc tttgggtaat cggtagggtc aacagcaatt cgatggtgcc aagccggcgt
      121 tcctcagccc agagccgcat ggtgatggca ggtaccagca gcagaaatac ccacggcaga
      181 aagttgaaga acggattgag gtcggcctgg ccgcggtcga agaaattgcc gagattgaac
      241 gtcagcgtgc cctgcagcac cagaaagatg acgataaaca cagtcgcgac cggcgtggca
      301 aaataggccg ccagctcgcg gtcggcgata gtcaggatgt tgcgcatgat caggcggctg
      361 cctccatggt caattgccgg aacacatcgt ccagcttgcc ggacggatgc atttcgcaca
      421 ggtccgcggg cgtggcgtcg accacgacct taccggccgc gatcacgatg gcgcgggtgc
      481 agacggcctc gacctcgtcc aggagatggg tggagatgat gatcgccttc tccggccgca
      541 tttgcgtgat cagtgcgcgg accccgcgct tctggttggg atcgaggcca tcggtcggct
      601 cgtccagcac cagcacgggc ggatcgtgca gcagcgcctg cgccagaccg acgcggcgct
      661 tgaagccttt cgagagtgtt tcgaccggct gcaggcggac gctttccagc cgggtcaggc
      721 caatcgcgta aaccacccga tcctgcaggt cggcgccgcg atagccgcgg atgcgggcac
      781 aaaagcgcag gaagccggtg accgacattt cgccataggt cggcgcgccc tcgggcagga
      841 agccaagcgc acgccgcgcc gcgacgccgt cggtttgtac gtcgtggccc atgatacggg
      901 cggcgccctc ggtcggaatc atgaatccgg cgagcatccg catcgtggtc gacttgccgg
      961 cgccgttggg accgagaaat ccaacgacct cgcctcggcc gacggaaaag gtcacgttat
     1021 ccacagccgt aaaggtgccg aagcgcttgg tcaggccctc gatttcgatc aggggggccc
     1081 cgccgtcggc gttgaggccg gcatcggaca cgtcgcgttc tcccgtcttg gttgtgggcc
     1141 gcggcaataa cgcattctga ttacgatgca agtactgggc ttgcagcgtt cccgctttga
     1201 ccggttcctt gcgaaagttt catcgcattg ccatccggcc cgcgttcccc cgtaccttgc
     1261 ccggagcgcc ggcgcgccgc acactggcca cgcccaaagg gagaggagac caccgatgat
     1321 ctacgaactg cgaatctacg aatgcgtccc cggcaagctg cccgacctga acaaacgctt
     1381 ctccacgatc acgctgaagt tgtgggaaaa gcacgggatc aaacagaccg gcttttggac
     1441 caccgtcatc ggtgagtcga gccagacgct gtattatatg ctggcctggg agtcgctggc
     1501 cgagcgcgag aaaaagtggg cggcgttcgg cgccgatccg gactggacaa ccgcgcgggc
     1561 gaagaccgag gagaacggcc cgatcgttgc caacgtgaag aatttcattc tcgcaccgac
     1621 gccctattct tcggtgaagt gagtttgaca cagaaacgac cgacgatgtc cccgggacaa
     1681 gcccggggat ggcgggggag tacccatggc acggctgatt ctgaccggcg acgtcaacct
     1741 gatgaacgtg acagacccag ccgtgccgtt ccgtcgtgtc gcggcggaat tccgtgctgc
     1801 cgacatggtg ttttccaatc tggaatgctg tctttacgcc ccgcccaaag cccattcgtt
     1861 tcataacgaa gggttttacg ccaatcccgc gattgccgca gcggcgttgc aggccgcggc
     1921 gatcggttcg gtcggcatcg ccaacaatgt caattacggc gatgccgcaa tcctgaattc
     1981 gattgccgca ttggatcagg ctggcatccc gcacagcgga gccggcgtcg accaggcggc
     2041 ggcgcgtgcg ccggtaatcg tcgaacgcgg cggcatccgc tttggttttc tgcaacgcag
     2101 ttccgtctac tggccgacca atcatgcggc cggcgagcac gatcccggca tcgcggtgat
     2161 ccgggcgcac accgcctacc aagtaccgat gcacaaaact cgtcccgaga tccctccgat
     2221 gaaccgccca ggaatcccgc cgattgtggt tacgtggcca gaccaggatt cgttgcgggc
     2281 attcaccgac gacattacgt cattgcgatc ccatgccgac atcgttgttg cttcgtgcca
     2341 ttggggactc ggtaaggaca cgctgtccta tatgcgcgac atcggccgcg ctgccatcga
     2401 tgccggtgcc gatatcgtga tcggccatgg tccgcattac tcgctggcgg tggaagtgca
     2461 tcgcggcaaa ccgatcttct acgggcttgg cagtttttcg ttccacaccg gccacggcgg
     2521 gcgagcgcac ggcaactggg tcggcatgat ggtacgcgcc gacgtcacac gagacggaat
     2581 cagcgccgcc cggtttcagt tcgtccgcca caatgcggcg aacgaaacgg tcctttgcgc
     2641 actggccgat gaggcggccg aattcgccga tatcgtcaaa cgcagcgccg aatatggcac
     2701 gcggctggaa ccggccggca acgaagtaaa cgtgattctg ggcgactgaa attcatttcg
     2761 ccatcacctt ttgcttccac aacgcccacg gacgttcgac caaaccgtcg ttggtcttca
     2821 tggcggcagc ggcttccttt tcattcagaa acatcggctt gccgattgcc aaagcctgaa
     2881 tttccgtgcg tgcgttgacc tcggtgtaaa tcgcccggaa cacgacgtgc ttcaccgatt
     2941 gggcagcggc gaccgaaccg tggcctcgca tcaacgccac ggaaccattg ccaagcgtct
     3001 tcgcaagcgc ctgtccgatg gcattgttcc ggaccagcat atcgctgtcc tggccggcca
     3061 cggtacggat ttcgaacacc ggcggcccgt cacccagaaa gcctgcgata tgattcatcg
     3121 gccgcagctt cacatcggta tcggcgaacg gcagcacggc gggggagtgg ctgtgcacga
     3181 tggccatgac atccggccgg acccggtaaa tctcgccatg gataaaacgt tccaggtacg
     3241 gcgtgcggcc gcgcgggtcg accggattgc tgtccaggtc gaattccatg atgtcggctg
     3301 cggtcaccag cgcgggcgcc atactgcgtg acagcaaata ccggccagga tccttgtcgt
     3361 ggcgggcaga gacgtggcca aacccatcga ccacgccctg atcgtaaagg atgcgattgg
     3421 cagagaccaa atcgtcgatc aaagccggat cggccggctc ggctgcaacg gcgtgcgaca
     3481 ctgctgttgc agcaagggca cacgcaagaa acccccggcg gccgagaccc gtatatcgac
     3541 acaagcacat ggcaaaggtt tcctcgcttt gtatttcccc cattttgtgg gaacatcatg
     3601 ccataaagca acgtcccctg gcggtggacg gcgcccaagg ccagcaaagc acaggagcca
     3661 gacaatggac gcactcgacc ttcttctgac gcgggaatcg gcactgaagc tcgacgcgcc
     3721 ggcgccgagc gaggcggatc tcgacaccat gttccagagt gccgtgcgtg cacctgatca
     3781 cggacggctg cggccgtggc gcttcgtggt gattgagggc gacaaacgcg tccggcttgg
     3841 cgagctgatg gccgatgcca tgcgcaaccg ggaacccgac gtcagcgccg acatgctgga
     3901 ccgcgaacgg gcgaagccga tgcgcgcccc aacgatcgtg gttgcggccg ctcgcgtgca
     3961 aaagggccac cgcatcccgg aattcgagca aattgctgcc gcggcggcgg ccacgcaaaa
     4021 catcatgctg gcggcccatg ctctgggtta cggcgcgatg tggaaaaccg gcgagcccgc
     4081 gtacgactcc agcgtgaaga ccgcgcttgg cctgaatgcc gacgatgaga tcatgggatt
     4141 tctgtatctc ggcaccaata ccggagccag ttcgccagca ccgcgcccgg cggcccggga
     4201 tcaggtcacg gtctgggctg ggtaattccg gaaggaacct aagccgcgtc gtggaagatc
     4261 acacccaggg tctgacgatc gcctgaccta acccggctga caccgtgccg catggtcagg
     4321 cgatacgggc cttttgttcc gcgtgcggga cggtgatgca ccggaaagat cgcggcatcg
     4381 ccaagcccca gaggcacaat ctcggctcgg gactgcgcgc gagggcgttg ctcgaccagc
     4441 agcaattcgc cgccggtgaa gtcgcggcca ggttcgctga gcagaatgac aacctgcaac
     4501 ggaaacacca tctccccata cagatcctgg tgcaggcagt tgaagtcgcc gggtccgtaa
     4561 cgcagcatca acggggttgg ccttgtttgg cccgcggcat ggcattgttc gatgaactcg
     4621 ggaagcgtcg gtggaaattc gccggcctgg cccaaagtgc gtcgccagcc attggcgagt
     4681 tcggccagcg gcggatacag cgcctggcgc aggcgtgcca ccggttccgg caacggatag
     4741 gccaaatagc gatattcgcc tctgccatag gcgtgctgct gcataatgat acgtttacgg
     4801 aaacgggctt cctcatccca catccgcgcc acgtccctac acccctccgc atccagcgcc
     4861 tttcgcaccg catagccctg ggcgtcgatc tcagcggcca ggtgcgctga attcagatca
     4921 agttcggtca tggcgagagt atg
//
LOCUS       DATAVD010001556         4685 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2009511, whole genome shotgun sequence.
ACCESSION   DATAVD010001556 DATAVD010000000
VERSION     DATAVD010001556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4685
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2009511"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..550)
                     /locus_tag="VHX39_29890"
     CDS             complement(<1..550)
                     /locus_tag="VHX39_29890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEX3995406.1"
                     /translation="MHSTSFRRFSGSLFLGTALLLPLLSGCGSSDSKTAASAMANAPV
                     DQLYNNGVDALNARRFSTADDQFNAVEQNYPYSPWAVNAQLMSGYSAYLQNKYTDAIG
                     TLDRFIQLHPAHRDVAYAYYLRALCYYEQIADIERDQKGTEQAMNALREVVTRFPDSA
                     YATDAKLKIDLCVDHLAGKEMEI"
     gene            complement(642..1592)
                     /gene="lpxC"
                     /locus_tag="VHX39_29895"
     CDS             complement(642..1592)
                     /gene="lpxC"
                     /locus_tag="VHX39_29895"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEX3995407.1"
                     /translation="MDGLAHLSLAQSGSFPGWRQRTLKAAIDCVGIGVHSGRRVSLTI
                     RPAAADHGIVFRRTDLHRDIAATFDNVADTRLCTVLADPVMSAARVGTVEHLMAALSA
                     LSIDNALIEVDGPEIPILDGSAAPFLFLLDCAGSVELDAAARVAEVCRTIRVTAGQAW
                     AELRPLGPMPRATSPVLELDLSIDFAASAIGRQSASLRLTPDNFRHQVAAARTFAHAE
                     DVEQLQAAGLARGGSLDNAIVVDGAKVLNPGGLRMDNEFASHKLVDAVGDLALAGARL
                     HGRFVAHRTGHGLNNRLLRALFAAPGAWRLIAADPLVAAA"
     gene            2275..3405
                     /locus_tag="VHX39_29900"
                     /pseudo
     CDS             2275..3405
                     /locus_tag="VHX39_29900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239024.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            3749..3889
                     /locus_tag="VHX39_29905"
     CDS             3749..3889
                     /locus_tag="VHX39_29905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3309 domain-containing protein"
                     /protein_id="HEX3995408.1"
                     /translation="MNIVLVLILLLLLFGGGGFYYGGPYVGGGLGTILLIVLIVVLFR
                     GA"
     gene            4445..4636
                     /locus_tag="VHX39_29910"
     CDS             4445..4636
                     /locus_tag="VHX39_29910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995409.1"
                     /translation="MSDQATDAPPTHPEEMKGTVEFKLGKLATVTATGRTTPAGLIGA
                     AVLVSSVLIPLAMMIRRGR"
BASE COUNT          906 a         1337 c         1547 g          895 t
ORIGIN      
        1 cgatttccat ttccttgccg gccaagtggt cgacgcatag gtcgatcttc agcttggcgt
       61 cggtcgcgta ggcggagtcg ggaaacctgg tcaccacctc ccgcagcgcg ttcatcgcct
      121 gttcggtgcc tttctggtca cgctcgatat cggcgatctg ttcataatag cagagcgcgc
      181 gcagatagta ggcataggcg acgtcgcgat gcgccgggtg caactggatg aagcggtcga
      241 gtgtgccgat cgcatcggtg tatttattct gcagatacgc cgaataaccc gacattagct
      301 gagcgttcac cgcccagggc gaataggggt agttctgctc caccgcgttg aactggtcgt
      361 cggcggtgga gaagcggcgc gcgttcagcg catccacgcc gttattgtaa agctggtcga
      421 ccggggcgtt tgccatcgcc gacgccgcgg tcttgctgtc cgacgaaccg caaccggaca
      481 atagcggcag aagcagcgcc gtcccgagga acagcgatcc cgaaaagcgc cggaaggagg
      541 tggaatgcat ggggcgactc ttgttcatcg cggggcttat accatgccat cgcgatccgc
      601 gaataccggg gtttaataag gcgcccggcg ggttggaccg atcaggccgc ggcgacgagc
      661 gggtcggcgg cgatcaaccg ccaggcgccg ggcgcggcga acaatgcccg tagcaggcgg
      721 ttgttgagac cgtggccggt gcggtgcgcc acgaagcgcc cgtgcagcct ggcgccggcc
      781 agcgccagat cgcccaccgc gtcgaccagt ttgtgactgg cgaattcgtt atccatgcgc
      841 aggccaccgg gattgaggac cttggcgccg tcgacgacga tggcattatc gaggctgcca
      901 ccgcgggcga ggccagcggc ttgcaactgt tcgacgtcct cggcatgggc aaaggtgcga
      961 gccgcggcca cctggtggcg gaagttgtcc ggcgtcaggc gcagggacgc ggattggcgg
     1021 ccgatcgcgc tggcggcgaa atcgatggac agatcgagtt ccagcaccgg gctggtggcg
     1081 cgcggcatcg gccccagcgg ccgcagctcg gcccaggcct gaccggcggt aacgcgaatg
     1141 gtgcggcaca cttcagcgac ccgagccgct gcatcgagtt ccacggagcc ggcgcaatcg
     1201 agcaggaaca ggaagggggc ggcggacccg tccaaaatcg gaatttccgg gccgtccacc
     1261 tcgataaggg cgttgtcgat ggacagggcg gagagggcgg ccatcagatg ctccaccgtg
     1321 ccgacgcggg cggcggacat gacgggatcg gccagcacgg tgcacaggcg cgtatcggcg
     1381 acattgtcga aggtcgcggc gatgtcgcga tgcaggtcgg tgcgccggaa aacaatcccg
     1441 tgatcggcgg ctgcgggacg gatggtgagg ctgaccctgc ggccggaatg aacgccgatg
     1501 ccgacgcaat cgatcgccgc cttcagggta cgttgccgcc accccggaaa gctgccggat
     1561 tgggcgagcg acaggtgggc cagaccatcc atcaagagca tcccatatgg tggcagcaga
     1621 atcaccaaca cctgaacgct ggttaacccg ttccgttgac ggcgccgagt caatgattgt
     1681 tgcccggtgt tacgcaccaa gctgttgcat ttattgtttt tgttgcactg cgttacgtgg
     1741 atgtcctggt ctcgtgtgca ggacgggact cggcgcacgt tctctggcct cgcaccgaat
     1801 cccgacgatg ggcaggacct ggtgtcccga atctgaagtt cgccacagtg ggcgaatctc
     1861 agattcgaaa cactatctct ttgttttcag tggcctgctg gccccagaag gccgccgcaa
     1921 gatgcgacga acttctgggg caggacacta gtacctcgtc acggtgattt tgaccggttg
     1981 agcgtgcccg gatttagctc gggcagtgca gagcgttcga gcaggaccgc gatactccgc
     2041 gggacccctg gctggcgtga gatcagccct gccttatcga gactgagtac catctggtga
     2101 acgcttggag gtgtgacgcg gaagaaccgc atcatatcgg cctccgctgg gggacgcccg
     2161 ttcactagtg tgtaggcgtg aatgaacgcc agatactggc cctgctttgg tgtgaaatct
     2221 ggtcgcgaat cagcggctgg attcatcgtg gtcctcgaca gcgggggatc agcgatgaac
     2281 atacgatacc gggtcgatct gagcgacatc gagcgcacac aactcacggc gttgcttaat
     2341 ggcggcaaac acgcggcgcg caagatcaag cgagcgcaga tcctgctggc ggccgacgcc
     2401 ggtgtcagcg acgacgtgat cgcaagtagc ctctcggttg gcggatcgac ggtctagcga
     2461 accaagcggc gcttcgtgca aggtaacctg gagttggcgt tcagcgagga ggctcgcccg
     2521 ggggccgccc gcaagctgtc gggcaaggag gctgcgttgc tggtggcgac cgcctgctcc
     2581 aacccgcctg agggacgcaa gcgctggacg ttggacctgc tggccggagc gatggtccgg
     2641 ttgaccgaac atgaaggggt gtcgcgtgag accgtgcgcc ggcgcctagc cgaggacgat
     2701 ctgaagccgt ggcggcggga catgtggtgc attccgcagg tcgatggcac ctatgtcgcg
     2761 cggatggagg atgtgcttga tctctatgcc gaagaggccg atccgaagcg cccggtggtt
     2821 tgctttgatg agagtccgac acagttgata ggggaggtgc gtgagctgat cccggctgag
     2881 ccgggtcagc cggagcgtta cgattgtgaa taccgtcgta atggcaccgc caatctgttc
     2941 gtgtttctcg acgcacacag atcctggcgc catgtgaagg tgacagatca gcggaccgcg
     3001 caagattttg cagtttgcat gcgcgatctg gccgatatcc actatccgga cgcagagcag
     3061 atccgggtcg tgatggacaa cctttccact cacaccgccg gggctctgta cgagacattt
     3121 ccggcgcaag aagcccaccg catccttcag cgcctggagt tccattacac gcccaagcac
     3181 gccagttggc tgaacatggt ggaaatcgag atcggcgtac tgcgcgggca gtgcctggac
     3241 cggcgcatcg gtgatcgcgc ggtcctcaac gcggaagtta cggcatggca acgccagcgc
     3301 aacgcgtcgg gcgcgcgcat caaatggaag ttcacgacgc agaaggtccg gcagaagctg
     3361 gcccgcgcct atccagacac cgccaaagag tcgaaatcac tgtgacgagg tactagtggc
     3421 cgatggtgtg gcgcagagcc gcgtgcgcat ccacggccgg ggcataattc agcctactga
     3481 tgcggcgtca ggcacgcctg ttcaagcggc tcgccgggtg ctgatcgcga tcggcggagg
     3541 ataacacccg gcctctccga aggcgtccaa gcggcctggg ttgaatttct cctggaacgg
     3601 cggcggggct ggagtgcggt tgcggaaaaa taatgcacaa gcaacaggca acagtcacat
     3661 tcgggttaac gtaggtagtt aagctctccg agccctatgc cccctgtgga aggcggtcca
     3721 tgctgccttc tttaggggag aacgtcagtt gaatatagtc ttggtgctaa tcctactgct
     3781 gttgctgttc ggtggcggcg gattttacta tggtggcccg tacgttgggg gtggcctggg
     3841 gaccatccta ctcatcgtgc tgatcgtcgt gctctttcga ggcgcctgat cagggcgcgc
     3901 ccgttaacga ttcatcgacc ttttcgttcc gactccatga gtcgactgtt atttcgctca
     3961 cgggcgctcg ttaacgccaa acaggcgcac ccttgtggga cgcgcctgtt cgtctaacca
     4021 aatttcatcc cggagaatgg cgacgggcat agagtgcgtt gcggaaggca atcgatcatt
     4081 ttgtaggggt tagatttaaa cactaatccg aagagggtct gtttcggtac tgactcggtc
     4141 gtgacaagct ccggcgatga aaatgtatcg aatcgccgag gccgatgaac cttcaaatat
     4201 tacgttccgg atcatcacag tcgatggcca tggacgtgaa acggtactcg atgcccggtt
     4261 tccaacacgc aaggaagccc aagatgttgt ctgcctcctg ttgacaacaa cccccgatgt
     4321 tccgtgttag ggcgacgcgc agcggcggtg aatcgattgg cctcagacct ttcgcgtgtg
     4381 tcgccaactt ggcgacttac gccgggcgtt ccatgcttcg gctgtgaact gaggagccga
     4441 cgatatgagc gaccaggcaa cagacgcgcc acccacgcac cccgaggaga tgaagggcac
     4501 cgtcgagttc aagcttggca aacttgccac cgtgacggcg acgggaagga cgacaccggc
     4561 agggctgatt ggtgcggctg tgttggtgtc ctctgtgctg atcccgctcg cgatgatgat
     4621 tcggcgcggg cgctgatggg tctccgattc gttgcagcag actggtggac tcgactcgaa
     4681 agtcc
//
LOCUS       DATAVD010001557         1957 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3123170, whole genome shotgun sequence.
ACCESSION   DATAVD010001557 DATAVD010000000
VERSION     DATAVD010001557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1957
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3123170"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..739)
                     /locus_tag="VHX39_29915"
     CDS             complement(<1..739)
                     /locus_tag="VHX39_29915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY family carbohydrate kinase"
                     /protein_id="HEX3995410.1"
                     /translation="MTRYVGAIDQGTTSSRFIVFDRAGRTVAMAQREHRQIFPQPGWV
                     EHDPDEILANTRAVVEEALCSASLSTADLAAVGITNQRETTVLWDRRTGRAVHNALVW
                     QDTRTDALVAEFARDGGQDRFRERTGLPLASYFSGLKLRWLLDHVPGARDGDLAFGTM
                     DAWLMWHLTGLHVTDVTNASRTQLMNIATLGWDDALLTAFGIPHSVLPSIVASSAVYG
                     EARGVLAGVPVAGILGDQQAALLGQACL"
     gene            complement(754..>1957)
                     /locus_tag="VHX39_29920"
     CDS             complement(754..>1957)
                     /locus_tag="VHX39_29920"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3995411.1"
                     /translation="KQLIASAQRPWMDSADAKELIAAHGIPVVRVKSATTPEEAGRAA
                     EEMGGSVALKIKSSVALHKSDVGGVVLDLSGADAVRAAAESMLERIENVDGFTIEAMA
                     QRPGAFELIIGASVDPTFGPVILFGQGGVAVEAIGDTTLALPPLDMELARGMIARTRI
                     SRQLLGFRGRPPVNMEALAAALVSISRLMLDHPEVVELDINPILADAEGVIAIDARVR
                     LDDPANRPQSAIVPYPRELETSVDLRDGSVMHLRPVRPDDATLLRRFLESVSREDIRA
                     RFHGALRDFSGPLLIRLTQIDYDREIALVGFRDGDELPLGVVRLYAEPDHVSGEFSII
                     VRSDLHGHGMGTALMHRIIALARARGLARIVGSVLRDNTRMLRLVRELGFVAENARGD
                     EVTMVLNL"
BASE COUNT          398 a          655 c          555 g          349 t
ORIGIN      
        1 ccaggcaggc ctgtcccagc agcgctgcct gttggtcgcc cagaatgccg gcgaccggca
       61 cgcccgcaag cacgccgcgc gcctcgccgt aaactgcgga agaggcaacg atcgagggca
      121 acaccgaatg cggaatacca aacgccgtca gcaacgcatc gtcccagccc agcgttgcaa
      181 tgttcatcag ttgcgtgcgg cttgcgttgg ttacgtcagt gacgtgcaat ccagtcaggt
      241 gccacatcag ccacgcatcc atggttccga atgcgagatc gccgtcccgc gcaccgggga
      301 catgatccag caaccaccgc agtttcagcc cggagaaata gctggccaaa ggcaacccgg
      361 tgcgctcacg aaaccggtcc tgcccgccat cccgtgcaaa ttccgcaacc agtgcgtcgg
      421 tcctggtatc ttgccagacc agcgcattat gcaccgcacg cccagtacgg cgatcccaca
      481 aaaccgtcgt ttcccgctgg ttcgtgatcc ctacagcggc gaggtcggcg gtcgacaggg
      541 atgcactgca caaggcttcc tcgaccacgg cgcgcgtgtt ggccaggatt tcatcaggat
      601 cgtgctcgac ccaaccgggt tgcggaaaga tttgccggtg ctcgcgctgc gccatcgcca
      661 cggtgcggcc cgctcggtcg aaaacgatga accggctgga cgtcgtgccc tgatcgatcg
      721 cgcccacata ccgagtcatt tgctctcccg attttacaga tttagcacca tggtcacttc
      781 atcgccgcgt gcattttccg ccacgaaacc aagctcacgc accaaacgca acatgcgcgt
      841 gttgtcccgt aggaccgagc cgacgattcg tgccagacca cgagcccggg ccagcgcaat
      901 gatccgatgc atcagtgccg tgcccatgcc gtggccgtgc aaatcactcc gaacgatgat
      961 ggagaattcg ccactgacat ggtccggttc ggcgtaaagc cgaacgaccc caagcggcag
     1021 ttcgtcaccg tcacggaagc cgaccaaagc aatttcgcgg tcgtaatcga tctgcgtcag
     1081 acggatcagc aatggcccac tgaaatcgcg tagcgcgccg tggaacctgg cgcgaatgtc
     1141 ctcccgcgac accgattcca gaaaccgcct cagcaacgtc gcatcgtccg ggcggactgg
     1201 ccgcaaatgc atgacgcttc cgtctcgcaa gtccacactc gtttccagct ccctggggta
     1261 tgggacgatc gccgattgcg ggcggttcgc gggatcatcc aatcgcacgc gggcatcgat
     1321 tgcgatcacc ccctcggcgt cggccaggat cggattgatg tcgagttcca cgacttcggg
     1381 gtgatccagc atcaaccggg atatcgagac cagcgcagcg gccagggcct ccatgttcac
     1441 cggcggcctg ccccgaaagc cgagcaattg tcgcgatatg cgggtacgcg cgatcatccc
     1501 gcgggcgagt tccatgtcca acggaggcag cgccaaggtt gtatcgccga ttgcttccac
     1561 agcgacgccc ccctggccga acaggatgac cggaccgaag gtcggatcga cgctggcacc
     1621 gatgatcagt tcgaatgcgc caggacgttg cgccattgct tcgatcgtga aaccgtcaac
     1681 gttttcgatc cgctccagca tcgattcagc cgcagcgcgt accgcatcgg caccggacag
     1741 gtccagaaca acgccgccaa cgtcggactt atgcagagca acactcgatt tgatctttag
     1801 cgcaacggaa ccgcccattt cttcggcggc ccgtccagct tcctcgggcg ttgtggcgga
     1861 cttcactcgt acgaccggga tgccgtgcgc ggcgataagt tctttcgcgt ccgccgaatc
     1921 catccatggg cgctgcgccg aagcaatcaa ctgcttg
//
LOCUS       DATAVD010001558         2477 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_152423, whole genome shotgun sequence.
ACCESSION   DATAVD010001558 DATAVD010000000
VERSION     DATAVD010001558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152423"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            97..606
                     /locus_tag="VHX39_29925"
     CDS             97..606
                     /locus_tag="VHX39_29925"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A24 family peptidase"
                     /protein_id="HEX3995412.1"
                     /translation="MILASAAIVLLAAWHDLVSRTVPNWMPALIAGFGIVAALVSARL
                     LISTGLGLAIFVAAAICWRRGLMGGADVKLLGAIAIALPPGMVSLFVVAMSLAGAVHA
                     VAYLVARRMVTRPPALVGAPAIPPRARSLLPRALRAERWRISRGGPLPYACAIAFGFL
                     FVVCNGAAP"
     gene            603..1481
                     /gene="cpaB"
                     /locus_tag="VHX39_29930"
     CDS             603..1481
                     /gene="cpaB"
                     /locus_tag="VHX39_29930"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HEX3995413.1"
                     /translation="MIVRVAFFILMALGLVGFGTVAWITTRPMGLGGAPPTKMILVTA
                     AQVDAGSLLTADNLLQKEIPITEVTKEYNLDTPDSRRGLMGAMVKRNLGAGEAIRSDD
                     LMRPSDHGFMAAVLSPGMRAVTINVDAASGSSGLIWPGDRVDLILTQVNNDPNATAGR
                     RISAHTVLSNVRVVAVDSQLVAGPNRNAAAIVDAANRTVTLEVDEDQAQRVAVGMRLG
                     RLSVSVRASSTVAGNAKTPTKNDATFAQDVLPDLIDKPAAAPVAPVIVTAPAPAPVEP
                     PMRVFSGPGEAKEFKF"
     gene            1481..>2477
                     /locus_tag="VHX39_29935"
     CDS             1481..>2477
                     /locus_tag="VHX39_29935"
                     /inference="COORDINATES: protein motif:HMM:NF025014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein N-terminal
                     domain-containing protein"
                     /protein_id="HEX3995414.1"
                     /translation="MRVLTGKLLTGKLLEIGVAISLLVARPVLAGDSPVTRLAQNTPP
                     VPEQTVPAPTTPDQSVQPGIPQSAPPQPTAEIPKPFHGSVSIEAGSGKILTLVLPAAN
                     IYVADPKVAEVRPASSTSLFIFGVGSGHTTIAAVDQLGRLLVDYDVTVRPSAFGAREA
                     QSAIARLIPNSRVQVKPSGKGMMLTGGVATAADAAQAMLIAKGFSSGDGANVDNQMTI
                     ASPTQITLMVRIAEMKRSTARNIGINWSANGLLGTATGALLPSSLTPLISSTLNSATC
                     GVGGGSGRLCFDTVLNALANEGLAHILAEPNLTVMSGQAASFQAGGEYPYAVPGGS"
BASE COUNT          457 a          790 c          753 g          477 t
ORIGIN      
        1 gcgtttttgg attctcgttg ccgccccgat gattgaacga ggttccagat gtcgtactta
       61 gtgtcgcatt cctggtcctc tgaaatcgcc gcctcaatga tcctggcgag cgccgccatc
      121 gtcttgctcg cggcgtggca cgatctcgtt tctcgtacag tcccgaactg gatgcctgcc
      181 ctgattgcag gattcggcat tgtcgcagcg ttggtcagcg ctcgcctgtt gatcagcacg
      241 ggactcggcc tggcgatctt cgtcgccgcg gcgatatgct ggcggcgcgg cctgatgggc
      301 ggcgcagacg ttaaattgct tggcgcaatc gccatcgctt tgccccctgg catggtgtct
      361 ttattcgtcg tcgcgatgtc gctcgcgggc gcggtgcatg ccgtcgctta cctcgtggcg
      421 cgccgaatgg tgactcgccc gcctgcactg gttggcgctc ctgcaatacc gcctcgggcg
      481 cgcagtctgc tgccgcgcgc attacgtgcc gaacgatggc gaatcagccg aggcggacct
      541 ctgccgtacg cctgcgccat agcgttcggt ttcctctttg tcgtttgtaa cggagctgcg
      601 ccatgattgt gcgtgtcgcg ttcttcatcc tgatggctct gggcctggtc ggcttcggta
      661 ccgtcgcctg gattaccacc cggcccatgg gcctcggtgg agcgccaccg accaaaatga
      721 ttctggtcac ggcagcgcag gtcgatgccg gcagcctgct gactgccgac aatctgctgc
      781 agaaagaaat cccgatcacc gaggtgacca aagaatataa cctcgacacg ccggacagcc
      841 ggcgcggcct gatgggcgcg atggtcaagc gcaatctcgg cgccggagag gcgatacgca
      901 gcgacgatct gatgcggcca tccgaccacg gcttcatggc cgccgtgctg tcgcccggaa
      961 tgcgagcggt gacgatcaat gttgatgccg ccagcggatc gtccggcctg atctggccgg
     1021 gagatcgggt cgacctcatt ctgacccagg tcaacaacga tccgaacgcc acggccggca
     1081 ggcggatcag cgcgcacacc gtgctttcga acgttcgggt ggtcgccgtc gattcacaat
     1141 tggttgccgg gccaaacaga aacgcagccg caatcgtcga tgcggcaaac cgcaccgtga
     1201 cgttggaagt cgacgaggac caggcacaac gagtggctgt gggaatgcgt ctcggccgtc
     1261 tttcggtgtc ggtgcgtgcg tccagcacgg tagccggcaa cgcaaagaca cccacgaaaa
     1321 acgacgcaac cttcgcccag gatgtcctgc ccgacctcat cgataaaccg gcggccgcac
     1381 ctgttgcacc ggtgatcgtg acggctcctg cgccagcacc ggtcgaaccc cccatgcggg
     1441 tcttctcggg cccgggtgaa gccaaggaat tcaagttctg atgagagtgc tcaccggtaa
     1501 actgctcact ggaaaactac tggaaatcgg ggtcgcgatc agccttctgg ttgcgcgacc
     1561 cgtgttggca ggcgacagtc ctgtcacgcg actggcacag aacacaccac ctgtgccgga
     1621 gcaaacggtg ccagcgccga cgaccccgga ccaaagcgta cagcctggca ttccccaatc
     1681 cgcgccacca cagccgaccg ccgaaattcc aaagccattc catggttcgg tgtcgattga
     1741 ggcaggcagc gggaaaattc tgaccttggt tctgccggcg gcaaacattt acgtcgccga
     1801 tccaaaagta gccgaggtgc ggccggccag ctccaccagc ctgttcatat tcggtgtcgg
     1861 ttctgggcac accacgattg ccgcggtcga tcagctcggt cgcctgctcg tcgattatga
     1921 cgtcactgtg cgtccgtcag cgtttggcgc ccgtgaagcg caatcggcga ttgcccggtt
     1981 gatccccaac agccgagtac aggtcaaacc gtccggcaaa ggcatgatgc tgaccggcgg
     2041 cgtcgcgacg gccgccgacg cagcgcaggc aatgctgatt gcgaagggct tctcctcggg
     2101 cgacggagcc aatgtcgaca atcagatgac gatcgcctca ccaacacaga tcacgctgat
     2161 ggtgcgaatt gccgaaatga agcgcagcac tgctcgcaac atcggcatca attggtcggc
     2221 gaatggcctg ctgggcaccg caaccggcgc attgttgccc tcgagcctca cgcctttgat
     2281 cagcagcacg ctcaactccg cgacctgcgg cgtaggtggc ggatccggcc gcctgtgctt
     2341 cgataccgta ttaaatgcgc ttgccaacga aggcctggca cacatccttg cggagccgaa
     2401 cctgacggtc atgagcggtc aggccgcgtc attccaggcc ggcggcgaat atccgtatgc
     2461 cgtgcccggc ggaagct
//
LOCUS       DATAVD010001559         6840 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2941907, whole genome shotgun sequence.
ACCESSION   DATAVD010001559 DATAVD010000000
VERSION     DATAVD010001559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6840
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2941907"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            150..1052
                     /locus_tag="VHX39_29940"
     CDS             150..1052
                     /locus_tag="VHX39_29940"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX3995415.1"
                     /translation="MIAPPYAAFYRYRDVASWLADHSHFVHWSQPMTQNDVKFIDSMP
                     EFYDRHLGALFFQPYADDLADRLSAFTVGTLLETAAGTGIVTETLARRLPLSVQIVAT
                     DLNQPMLDHAKTKPGVERVTFQQADALALPFPDDGFDVLICQFGVMFFPDRQQGFREA
                     RRVLKPGGRLLFNVWDRIERTPPSHAVVIGLQRRYPAHPSWFLERTPSGYHDPDIIRA
                     DLRAAGFADCRIDTVVRTGHAASPRGVALGLCQGSPLRAEIEALDPTGLEAATEAAAA
                     MVAERCGEGAFETPLQALVVETTR"
     gene            complement(1276..2094)
                     /locus_tag="VHX39_29945"
     CDS             complement(1276..2094)
                     /locus_tag="VHX39_29945"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX3995416.1"
                     /translation="MSEDASGAFRETYADLYDRLLVPLLFAPYSQIITRHALRIRPRA
                     ILETAAGTGVLSHELARDLPPDTSITATDLNQPMLDKAQAKPGSANITWRQADAMKMP
                     FPDESFDLAVCQFGVMFFPDKAASFQEIARVLRRGGSYVFVVWDDWAQMEHAPLAVAA
                     DVVSEMLGCEPRSLVNPPYHDEATIRADLATARFEKIDIQRVTQPARAASARAAAVAT
                     VHGSLIRTVIESKAPARLQEATDAVEQAFRARYGGGEIAGSTKGLVIAAGKPAA"
     gene            complement(2564..3166)
                     /locus_tag="VHX39_29950"
                     /pseudo
     CDS             complement(2564..3166)
                     /locus_tag="VHX39_29950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007686149.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            complement(3315..3707)
                     /locus_tag="VHX39_29955"
     CDS             complement(3315..3707)
                     /locus_tag="VHX39_29955"
                     /inference="COORDINATES: protein motif:HMM:NF018259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TniQ family protein"
                     /protein_id="HEX3995417.1"
                     /translation="MKGKPGGVITNRRWPLHPRPSEWEDLETWVRRIAEVYGVSYDAF
                     LLNALDHTGRGARDLNKAPDGVIAKLSTGTGISIERLRGMTSSRVMARLFSRAQELRE
                     TPEGQAILVGLNAVASRDRRRESAVRGF"
     gene            complement(3704..4597)
                     /locus_tag="VHX39_29960"
     CDS             complement(3704..4597)
                     /locus_tag="VHX39_29960"
                     /inference="COORDINATES: protein motif:HMM:NF017437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TniB family NTP-binding protein"
                     /protein_id="HEX3995418.1"
                     /translation="MAHLRPEARELALLPAAERLTRMPTNRWIGYTRASQVITLLGRL
                     LAKEPGRIRPRNLLIVGPTNNGKTAIAERFLRDHPQRPSENGEHEIHPVMLVQMPSAP
                     TVSRLYAAILAGLGVPGALHPRSPDREGAALHLLRRVECRMLVIDELHNLLAAPNPRQ
                     RELLNLLRYLGNELRIPLTCLGTREAYLAIRTDDQLENRFEPFLLPIWEDGQEFGRLL
                     ASFETVLPLREPSGLGLPAMRAMILQRSEGTIGEVAALLAAATETALASGLERIDVNS
                     IETASYQPPNVRRRTFERELR"
     gene            complement(4610..6283)
                     /locus_tag="VHX39_29965"
     CDS             complement(4610..6283)
                     /locus_tag="VHX39_29965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020485769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HEX3995419.1"
                     /translation="MVDVSLVPEAAWCEARRRAEVIRPLVESAHQSRHLVQAAAATLG
                     LSERQTYTILRRCREAGGDLTSLLPGISSGGRDKRRVAPASETALERIVRELYLTPQK
                     PTAARVVREVIGRCRSETLPVPSPNTVRRRLKALSLADMRRRGEEHPEAKPVHGRAPP
                     ARHPLDLVQVDHTPMDLIVVDPIDREPIGRPWLTVAIDTYSRCIAGFHVTLEAPGATS
                     VGLCLTHVAMDKAPWLAMREVTATWPVQGKPRRLGVDNGSEFHSQAFERGCAQHGIAI
                     EWRPPGRPHFGGVIERLIGTLMGLVHGLPGTTFSNVGQRESYDSDKAACLTLDEVEHW
                     LAVAVAKYYHQHPHEGLDGQTPLRRWQEGVTTLLTEGGSVPVPRDPRAYLVDFLPVLR
                     RSLQRNGITIDHLTYFSSALRAWITARDRPGPLLIRRDPRDLSRVFVLDPQDDGYLEV
                     STRDLSRPAISLWEHRLARRRLRLRHRGAVDEAVLFAAIEEMRATERDAARLTRSARR
                     DRVRRSAAPKQPAAPPPVTSAPTELTNAIIVSDMVEAVAPVPFDIIEQW"
BASE COUNT         1259 a         2121 c         2096 g         1364 t
ORIGIN      
        1 actgacccct gcccctggtt ggccgcattt tacgcatgat aacgtccttt atcatgcgtg
       61 agaaatatgc taggtgtcat tttccaaagt cgacttcagt ggtttgccaa agtcctcttc
      121 aacggtccgt tgcggtggag atcaggctgg tgattgcacc tccgtatgcc gcattctacc
      181 gttatcgcga cgttgcttcc tggcttgccg atcactcgca ctttgtccac tggagccagc
      241 ctatgacgca gaacgatgtc aaatttatcg actcgatgcc ggaattctat gaccgtcatc
      301 tgggcgcgct gttttttcag ccgtatgcgg acgacctggc tgaccggtta tccgccttca
      361 cggtgggcac gttgctggag accgccgccg gcacaggtat cgtgacggaa accttggcaa
      421 ggcggctccc attatcggtg cagatcgtgg ccaccgacct caatcaaccg atgctcgatc
      481 atgccaaaac caagccgggt gtggagcgcg tgacctttca gcaggccgat gcgctggctc
      541 taccgttccc cgatgatggg ttcgatgtcc tgatttgcca atttggcgtg atgttcttcc
      601 ccgatcgtca gcagggcttc cgcgaagcgc gccgcgttct caagccgggt gggcgtctcc
      661 tgttcaacgt atgggacagg atcgaaagaa ccccgccgtc acatgccgtg gtgatcggat
      721 tacagcggcg atatcctgcg cacccttcct ggttcctgga gcgcacgccg agcggctatc
      781 acgacccaga tatcattcgc gcggaccttc gggcggctgg ctttgcggat tgtcgcatcg
      841 acacagtcgt gcgaaccggc catgcggcca gcccacgagg cgtcgccctg ggcttgtgcc
      901 agggctcgcc gttgcgcgcg gagattgagg cgcttgaccc aaccggactg gaagctgcaa
      961 ccgaggctgc cgctgcgatg gtggcggagc gctgcggcga gggggcgttc gagacgcctt
     1021 tacaggcact ggtggtggaa acaacccggt agcggcgctg cccattacca gccccaaaag
     1081 gggtcactcc acgatttgta caaaatcgta cgctaagagg cgcgacgcgt cagatcaccc
     1141 ctctgagcga gctttcagat gccgcttgcc tttgaactcg attctgcaag agggttttga
     1201 aacagaaaac cccagggcgt gccgttcagc ttgtcgcgtt acgcaaacgt tcgtttacga
     1261 aaggcttaga ctggatcacg cggcaggctt tcccgcagcg atgacgagtc ccttagtgga
     1321 gccagcgatt tcccccccgc cgtaccgggc acgaaacgcc tgttccacag cgtcggtcgc
     1381 ctcttgcagc cgcgcggggg ccttcgactc aatcaccgtt cggatgagcg atccgtgcac
     1441 ggtggccacg gccgccgcac gcgccgacgc agccctggcc ggttgggtga cgcgttgaat
     1501 gtcaattttt tcgaaacgcg cagtcgccag atccgcccta atggtggctt cgtcgtgata
     1561 cggcgggttc accagggatc gtggctcgca ccccagcatc tcgctgacca catcagccgc
     1621 cacggccagt ggtgcatgtt ccatctgagc ccagtcgtcc cacacgacga agacatacga
     1681 gccaccccgc cgtagtacgc gggctatttc ctgaaaggat gcggctttgt ctggaaagaa
     1741 catgacgccg aattggcaga ctgccaggtc gaagctttca tcagggaatg gcattttcat
     1801 agcgtcagcc tgccgccagg tgatgttggc cgatccaggt ttggcctgtg ctttgtccag
     1861 catgggctga ttgagatctg tcgcggttat cgacgtgtca ggtggcaggt cccgcgccaa
     1921 ctcgtgcgag aggacccctg ttcccgccgc ggtttccagg atcgcacgcg ggcggatgcg
     1981 tagggcatgg cgagtgatga tttgcgaata gggtgcgaac agaagcggca ccaggaggcg
     2041 gtcataaaga tcagcatatg tttctctgaa cgcaccgctt gcatcttcgg acatccgttc
     2101 actcccggcc acgctcattg aggtgataga agcgatattt tctatgtgcc caggttatcc
     2161 gggcaatagc gggtggaccg taatcgcctc tctgcgagct gggcaacata gccgcaaaac
     2221 cggcgacggg cgaggaagtc gagcgcgcgc ccggccgaag gcacggctcg gagcggcttg
     2281 atcgtgcgcg acctgctgaa cgagaacatc gcgacctcgg aggccggccg ccttatcggg
     2341 cctccgtccc tcaaagtacg acccccacct tcctctactg gcttagcgta cgattttgta
     2401 caaatcgtct ggtgaccccc aaaaggccag cgagaaatca gtttcaactt tgcccgcatg
     2461 tccgtttggg gtcggatgct gtcctaccgc cctgatcgct caacccggtc tcttttctga
     2521 atcgatcttt cggttccgtt actacctgcc cccttttccg acggagcagc ttctcgccgt
     2581 ctggcctcag ctgtcccgtg gggttcatgt ggcgatacag cgtctgccgg ctgacgccga
     2641 gttcgatgca tagttcaccg attttggtgc ctggctgacc catggcggcc tgggcaagcc
     2701 gcagcttggc ggtggtcatc ttgaatggtc ggccgccgtt gcggccccga gcgcgcgcgg
     2761 acgccaagcc agccttggta cgctcgacga tcaattcgtg ttcgaactca gccagcgccg
     2821 cgaagaagcc gaacatgagc ctcccgttcg gtgtcgtggt gtcgatcgcc gcgccctcgc
     2881 cggcgagcac gcgtagccca acaccgcgtt tggtcaggtc atggacgagg ttgaccaggt
     2941 gccgcagatc gcggccgatc cggtcaagct tccaggccac aagggtatcg cccttccgca
     3001 agcttttcag gcacgcgtcc agacccggcc ggtcatcgcg tttaccggaa gcgtgatctt
     3061 catagagatg gtcagatgaa atgccgccac cgatcagcgc atcacgttgc agatccagca
     3121 cttggctgcc gtccgccttg ctcacgcgca tgtagccgat cagcaccggg ttccccgctc
     3181 catatacgac cgattacgtg acaaactcgc gaggcaccgc gtcgacccgc caaacagtct
     3241 cgtaatccgt cactctatct atgctctgca aaccatcatg attcatgaat acgtgatatg
     3301 gttacgattt gcaatcagaa tccacgcacc gccgactcac gccgccggtc gcgggatgcc
     3361 accgcgttca ggccaacgag gattgcctgg ccctctggtg tttcgcgcaa ttcttgcgcc
     3421 cgtgaaaaca agcgggccat gacccgtgac gacgtcatgc cccgtaatcg ttcgatcgag
     3481 atccccgtgc cggttgataa tttggcgatg acgccgtccg gcgctttgtt cagatcacgc
     3541 gctccgcgcc cggtgtgatc cagagcgttg aggaggaacg cgtcgtagct gacgccatac
     3601 acctcggcga tccggcgcac ccacgtctcc aggtcttccc attcggacgg ccgtggatgc
     3661 aaaggccaac ggcggtttgt tatgacgcca ccaggtttgc ctttcatcgc aactcacgtt
     3721 cgaacgtgcg ccggcgcacg ttcggcggct gatacgaagc cgtttcgatt gaattcacgt
     3781 cgattcgctc caggccgctc gcgagcgcgg tttcagtcgc ggcggcgagt aacgccgcga
     3841 cttcgccgat tgtcccttcc gagcgctgca atatcatcgc gcgcatcgcg ggtaggccca
     3901 ggccggacgg ttcgcgtaac ggtaggaccg tttcaaagct cgcaagcagg cggccgaact
     3961 cttggccatc ctcccagatc ggcagcagaa agggttcgaa acgattttcc agttggtcgt
     4021 cggtgcggat ggcgagatac gcctcgcgcg ttccaaggca ggtcagcgga atacgcaact
     4081 cgttgccaag atagcgcaac aggttgagca actcgcgttg tcgcggattg ggcgcggcca
     4141 gcaggttatg cagttcgtcg atcaccagca tgcggcactc gacccgacgc agcagatgca
     4201 gcgccgcgcc ttcgcgatca ggtgaccgag gatgcaatgc cccaggcaca ccaagaccgg
     4261 cgaggatcgc ggcatacagc cggctcaccg ttggcgcgga tggcatctgc acgagcatca
     4321 ctggatggat ttcgtgctcg ccattctctg aggggcgttg tgggtgatcg cggaggaaac
     4381 gttcggcgat cgccgtcttc ccgttgttgg ttggtccgac gatcaggagg ttgcggggcc
     4441 ggatgcggcc gggctccttc gccagcaggc gcccgagcaa cgtgatcacc tggcttgctc
     4501 gcgtgtagcc aatccagcga ttggtgggca tgcgcgtcag acgttcggcc gcgggcagca
     4561 gggccagctc ccgcgcctcg gggcgtagat gcgccatgtc cacggccgct caccactgct
     4621 cgatgatgtc gaacggaacc ggcgcgacgg cttccaccat gtccgaaaca attatcgcgt
     4681 tcgtcagctc tgtcggcgcc gatgttactg gtggcggtgc ggcgggctgc tttggggcgg
     4741 cggaccggcg cacgcgatct cgccgcgccg accgggtcag ccgcgcggca tcgcgttcgg
     4801 tcgcgcgcat ctcctcgatc gccgcgaaca gcaccgcttc atccaccgcg cctcggtgcc
     4861 ggagccgcag gcgtcggcgc gccaggcgat gctcccagag tgagatggcc ggccgcgaca
     4921 ggtcgcgcgt cgacacttcc aggtaaccgt catcctgggg atcgagcacg aacacgcggc
     4981 tgagatcgcg cgggtcacga cggatgagca atggaccggg ccggtcgcgc gccgtgatcc
     5041 aggcacgaag ggcggaactg aagtaggtca ggtgatcaat cgtaatccca ttgcgctgca
     5101 ggctgcgacg caacaccggc aggaagtcca ccaggtacgc gcgaggatct cgcggcaccg
     5161 ggacgctgcc gccctcggtc aggagcgtgg tgacgccttc ctgccaacgc cgcagcggtg
     5221 tctgtccgtc cagaccctcg tgcgggtgct ggtgatagta cttcgccacg gcgacagcga
     5281 gccagtgttc gacttcgtcc agcgtcagac aggcagcctt gtcgctgtcg tagctttccc
     5341 gctgacccac attggagaag gtcgtaccgg gcagcccatg cacgagaccc atcagcgtgc
     5401 cgatcaaccg ttcgatcacg ccgccgaagt gcggccgtcc gggtggacgc cactcgatgg
     5461 cgataccgtg ttgggcgcag ccgcgctcga atgcctggga gtggaattcg gatccgttgt
     5521 ccacgccgag ccggcgcggt ttgccctgca ctggccaggt tgccgttacc tcgcgcatcg
     5581 ccagccatgg cgccttgtcc atcgcgacgt gcgtgagaca aagaccgaca gatgtcgcac
     5641 ctggcgcctc cagagtgaca tgaaaaccag caatgcagcg gctatatgtg tcgatggcga
     5701 ccgtgagcca tggccgacca atcggttcgc gatcgatcgg atcgaccacg atcaggtcca
     5761 tgggcgtgtg atccacctga accaggtcca atggatgccg ggcgggcggc gcacggccat
     5821 gcactggctt cgcttcggga tgctcctcgc cgcggcgtcg catgtcagcg agggacaacg
     5881 ccttgaggcg gcggcgaacg gtgttcgggg atggaacggg gagtgtctcc gagcgacacc
     5941 ggccgatgac ctcgcgaacc acccgggccg cggtcggctt ctgtggtgtg aggtagagtt
     6001 cgcggacgat ccgctccaat gccgtctcgc tggccggtgc cacgcggcgc ttatcccggc
     6061 caccactcga gatgccaggg agcagagaag tcagatcacc gcctgcctcg cggcagcgcc
     6121 gcaggatcgt ataggtctgc cgctctgaca gcccaagcgt tgccgcggcg gcctgaacca
     6181 aatgacggga ctggtgagcg ctctccacca gtggccggat cacttcagcc cgacgccgcg
     6241 cctcgcacca agccgcctcg ggaaccagcg acacgtcgac catgctcgat ccttatcctg
     6301 cgccagattg cggtcgcctt tggcaagatg ccggatgttg cataccactt tgagcaagat
     6361 tgcggtcggg tgtggcaagg ggaatcgtga tattccagcg cttggcgctg aagacgactt
     6421 tgggaaatga caaccggcat aagatactgt cattttgata attatctggc gtaggatttt
     6481 gagaattaat tggcgcgatc cggtccggag tcagggaggc gtcgcagatg gcagttcgcc
     6541 gccgtggcgc tcggaaggat aaggtctggc tgtccgcttt ctgatccggc aatcatattg
     6601 tccgtctcgc cattgaaatc ccggggtttc cggacgccta aggcgtgacc gtccaacctc
     6661 ggtttgacgg acaagcttcc ggccacttct caagctgacg aattggcggc tttggtcgat
     6721 gcgcaagata gcgttcaaaa atctacgcca gataattatc aaaatgacat gcagagctat
     6781 gcgtgcatca ccgtttcatg gatcgccttg cagtgacgca caaggttctg ccgcgaggca
//
LOCUS       DATAVD010001560         1520 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_895478, whole genome shotgun sequence.
ACCESSION   DATAVD010001560 DATAVD010000000
VERSION     DATAVD010001560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_895478"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..405)
                     /locus_tag="VHX39_29970"
     CDS             complement(<1..405)
                     /locus_tag="VHX39_29970"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3995420.1"
                     /translation="MVTVIVVNWNRRELLRACLDSLCRQTGVPFEIIVVDNGSNDGSA
                     EMAEREFGCRVIRNRENRGFCAANNQGIAAAAGEFIALLNNDAEAEPGWLPALCLACD
                     RAPDVGMAASKILVWEDPHVIDKVGHLIFPDGQ"
     gene            537..>1520
                     /locus_tag="VHX39_29975"
     CDS             537..>1520
                     /locus_tag="VHX39_29975"
                     /inference="COORDINATES: protein motif:HMM:NF024855.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RodZ domain-containing protein"
                     /protein_id="HEX3995421.1"
                     /translation="MTSIGETLRRERLKRNFDLDRVSRELKISPKLLDAIENERFEKL
                     PGGVFAKSFVRQYAHLLGLDEEEIVAELQRVLEPQASNQHSQSHPVVKRLEQIPLPRV
                     ERWDAVGDRRVPWSSSLPALALVLVMMLACSAIYSWWQWSRRPVAVAPPAPLEAVNQL
                     PAVTHPAATAPANAPSIPAPAPVAANAGANTGAVAAAADASREQVASTAPPSAAPTAA
                     SAVPAASSTDAAVRVEMTAVEPVWVSARSDGKYVFSGTLATNQSQAVTGTNNVVLRLG
                     NAGGLRILLNGKPIGPVGPKGQIRTIQLTSGGFQIVVPEASKSGQDPVLSDD"
BASE COUNT          306 a          442 c          465 g          307 t
ORIGIN      
        1 ctgcccatcg ggaaagatga ggtgcccgac tttgtcgatc acgtgcggat cttcccagac
       61 caaaatcttg ctcgccgcca tgccgacgtc cggcgcacga tcgcaggcaa ggcagagggc
      121 cggaagccag cccggttccg cttcggcatc attgttcagc agggcaatga attctcccgc
      181 ggcggctgcg atgccctgat tattggccgc gcagaagccg cgattttcac gattgcggat
      241 cacccggcag ccgaattccc gctcggccat ttcggccgaa ccgtcgttcg aaccattgtc
      301 caccacgatg atttcaaacg gtacgcccgt ttggcggcat agagaatcga gacaagcgcg
      361 aagcagttct ctgcggttcc aattgacgac gatgaccgtg accaaccgaa tatgctatca
      421 attccgcgcg cccggacagc ggagaacgcc taacggatgg ccggtaaggc tggcatggtg
      481 ggctgaattg tctgactgct ctagtgttat aaaatggatc cggggaaccc taccgcatga
      541 cgtccattgg cgagacgttg cgccgcgaac ggttgaagcg caacttcgac ctggacaggg
      601 tttcgcgcga actcaagatt tcgccgaagc tcctcgacgc tatagaaaac gagcggttcg
      661 aaaagctgcc cggcggagta tttgccaaga gcttcgtccg ccagtatgct cacctgctag
      721 gcctggatga ggaggagatt gtagcggagc tgcagcgtgt tctcgaacca caggcgagca
      781 accagcattc gcaatcgcat ccggtagtca agcggctgga acagattcct ctgccgcgcg
      841 ttgagagatg ggacgcggta ggtgaccggc gtgttccgtg gtcttcttcg cttcctgctt
      901 tagcactggt actagtgatg atgctggcat gctcggctat ctattcgtgg tggcagtgga
      961 gccggagacc ggtcgcggtg gcaccgccgg cgccgttaga ggcggttaat cagctcccag
     1021 cggtcacaca tccggccgcg acggctccag caaatgcacc gtctatccct gcgcccgcgc
     1081 ctgtggcggc gaatgccggc gcaaatacgg gtgctgttgc cgctgctgcg gacgcctcac
     1141 gagaacaggt cgcttcgacc gcacccccgt ctgccgctcc gaccgcagcg agcgctgtac
     1201 ctgctgcttc atccacggat gccgcggtaa gagtagaaat gacggctgtt gagcccgttt
     1261 gggtgtctgc ccgctccgac gggaagtacg ttttttcggg gacgcttgcg accaaccaga
     1321 gccaggcggt tacgggtacc aacaacgtgg tgctgcgatt aggaaatgcg ggaggccttc
     1381 ggattttatt aaatggaaag ccgatcggac cggtaggtcc caaaggccag atcaggacga
     1441 ttcaactgac gtccggcggt ttccagattg tcgtcccaga ggcctcgaag tctggtcagg
     1501 atccggtgct ttcagacgat
//
LOCUS       DATAVD010001561         4548 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2010105, whole genome shotgun sequence.
ACCESSION   DATAVD010001561 DATAVD010000000
VERSION     DATAVD010001561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4548
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2010105"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..672
                     /locus_tag="VHX39_29980"
     CDS             <1..672
                     /locus_tag="VHX39_29980"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995422.1"
                     /translation="STGTMAVVLLVLWNFWAPATPANAAAAKIEWPGLLGQRNTWLLS
                     LAQLGSFGTIISAGVWVNTLLIKNLHLEPKVAGMIGSLVLLLGIFSRPIGGVILDRKW
                     MSPKLLLISSLGLLAVGYLAIGYADTMPMAIAAIVFTGMMAGLPFGGIFNFAVYSCPK
                     NPGVAMGIVNTFGAWGVMILPPIIGYLVDRSGTFVSGFYLLGAVALLGALASTLLLRR
                     DAVIV"
     gene            complement(864..2879)
                     /locus_tag="VHX39_29985"
     CDS             complement(864..2879)
                     /locus_tag="VHX39_29985"
                     /inference="COORDINATES: protein motif:HMM:NF040438.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase domain-containing protein"
                     /protein_id="HEX3995423.1"
                     /translation="MIALHITDRRPFANGHSFGETGPYERLTGRALFAVDPLAAAQSD
                     VVDLDKAPRDAQGLVHFAADFMILKPVELSRGNRRVFYDYGNRGHKRALQFFNDAPHS
                     NDPLSLSHAGNGFFMRRGYAVAWIAWEGDMLPGDNRMVLDVPVATDNGQPITDRIRVE
                     FIPDAPGATCYPLSGRVAGHSYRTASMETRDAVFTRRRYPYDEPEIIAPDQWSFATEV
                     LGAGAETRVPERAIAPSDWHIHYPAGFHPGWIYELLYTAKDPKVMGLGHVAVRDFVSF
                     LKYDQSEANPLRGAQMAYAWGRSQTGRCLRDFVYRGYNADAAGRRVFDGVMPHVAGAG
                     RKWMNHRFANPIVSGGQQYEDHFNIADSFPFSYARSTDHLTGRQDAILKRPETDPLVF
                     HTQTATEYWVRRGSLAHTDTQGNDLAQPETVRIYFWSSSQHSADPLLKGPAGGIGQHY
                     SNNVATSMFFRAILDAMDAWATSGKKPPPSEIPRRADNTLVDYATWREQFPDIPGVMP
                     LGCANPLPLLDFGPDADKGILREPPTFVHGRNDPDGPGLGYTVLVPSVDRNGNDVAGV
                     RAPMVAAPLGTYTGWNPRAHGHGHGMQWRFEGSYIPFPDTPSERTATNDPRRSILERY
                     ATRQEYQAAIVAAARELVAQGLMLEEDVERCAEMAADWGRPRHSVSL"
     gene            2992..4011
                     /locus_tag="VHX39_29990"
     CDS             2992..4011
                     /locus_tag="VHX39_29990"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3995424.1"
                     /translation="MITDHAVRTPRHTSFYLACGAPGAVPIIFVHGWPELSISWRHQL
                     PCFAALGFRAIAPDMRGYGRSSVPVRHEDYAMELIAGDMIELLDSLGCAKAIWVGHDW
                     GSPVVWSIASHHPERCHGVASLCVPYFPVGAGFRSAIDLIDRIMYPAAEFPAGQWDYQ
                     LFYRENFDKACTVFEANVAATVKALFRKGDPAGKGKPSRLATVRKEGGWFGGRPEAPD
                     LPLDTDVMTEAELSTYVAALTRNGFRGPCSWYRNPEANAAYQAKAVNNGRLDMPALFL
                     HAGYDYTCQTIDSPMAEPMRQACTDLTEAEVSTGHWMAQEDPVAVNAALARWIVTKLP
                     SVWPG"
     gene            4024..>4548
                     /locus_tag="VHX39_29995"
     CDS             4024..>4548
                     /locus_tag="VHX39_29995"
                     /inference="COORDINATES: protein motif:HMM:NF014766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-galactonate dehydratase"
                     /protein_id="HEX3995425.1"
                     /translation="MKITKVEPLLLDRFLYVRVQTDSGIVGIGESGTWGQLEASAAAI
                     AKYGDYLVGKDPFPIEHHWNVMLRANHFTGGAITGAVSAIDIALWDIKGKFFNVPVYE
                     LLGGKVRHKARLYGHVKGRTIEKLVEEAVRLKEAGFTALGHLNPLLDESERDPYYKSH
                     AAKIEGAIDNVRRLR"
BASE COUNT          852 a         1346 c         1430 g          920 t
ORIGIN      
        1 tcgaccggaa cgatggccgt tgtcctgctg gtgctatgga acttttgggc accggcaact
       61 ccagccaacg ccgcggccgc gaaaatcgaa tggccaggcc tgcttggtca acgcaacacc
      121 tggctgctta gcctggcgca acttggcagc ttcggcacga tcatttcggc tggcgtctgg
      181 gtcaacacgt tgctgatcaa gaaccttcat ctcgagccga aggttgccgg catgatcggc
      241 tcgctggtgc tgcttctggg catcttctcg cggccgatcg gcggcgtgat cctcgaccgc
      301 aagtggatga gtccgaagct gctgctgatt tcctcgcttg ggttgctcgc cgtcggctat
      361 ctcgccatcg gttatgcgga cacaatgcca atggccattg ccgccattgt cttcacggga
      421 atgatggccg ggttgccgtt cggcggcatt ttcaacttcg cagtctattc ctgtccgaag
      481 aatcccggcg tggcgatggg catcgtcaac acctttggcg cgtggggtgt catgatcctg
      541 ccgccgatca ttggctatct cgtggaccga tcgggcacgt tcgtcagcgg attctatctg
      601 ttgggggcag tggcgttgct cggtgctctg gcgtcgaccc tgctgctgcg acgtgacgca
      661 gtgatcgtgt gatcgtattc gccagcaatc aatgcggttt cggccgcatt gattgctggg
      721 tggccacagg ctgcgtcggt gaggtcatgt cgcctctgga cgccggcgtg atcaggttcc
      781 gctcaccaga cggaacgatt gccgagctgg tgcaaaaagt ccgttacgaa aacctgaaga
      841 aattccacgg cgtcgcctga ccgtcataag ctcacggaat gccgcggccg gccccagtcg
      901 gccgccattt ccgcacacct ctccacgtcc tcttccagca tcaaaccctg cgccaccaat
      961 tcccgcgcgg ctgcaacgat cgccgcctga tactcctgcc gggtggcata gcgttccaat
     1021 atcgaccggc gcggatcgtt ggtcgccgtg cgttcggatg gcgtatccgg gaacggaatg
     1081 tagcttccct cgaaccgcca ttgcatcccg tgaccatggc catgggcccg cgggttccat
     1141 ccggtatatg tgccaagcgg agccgcaacc atcggcgccc gcacacccgc aacatcgttg
     1201 ccatttcgat cgactgaagg caccagcacg gtataaccca atcccggccc atccggatca
     1261 ttccggccat gcacaaacgt cggaggctcc cgcaggatgc ccttatcggc gtcaggcccg
     1321 aaatccaaca acggcaacgg gttcgcacag ccaagcggca tgacacccgg aatgtcgggg
     1381 aattgctcgc gccacgtcgc gtaatcgacc agcgtgttat ccgcccgcct cggtatctca
     1441 ctgggcggcg gtttcttgcc gctggtcgcc catgcatcca tcgcgtccag gatggctcgg
     1501 aagaacatcg aggtcgcaac gttattggaa taatgctgtc cgataccgcc ggccggcccc
     1561 ttcagcagag ggtcggccga atgttgcgaa ctcgaccaga aataaatgcg taccgtttcg
     1621 ggttgcgcca gatcgtttcc ttgcgtgtcg gtatgcgcca gggaaccgcg ccgaacccag
     1681 tattccgttg cggtctgggt gtggaacacc agcggatcgg tctccggccg tttcagaatc
     1741 gcatcctgcc gtccagtcag atgatcggta gaccgcgcgt aggagaatgg aaaagaatcc
     1801 gcgatattga aatgatcctc gtactgctga ccgccggaga cgatcggatt ggcgaaccgg
     1861 tggttcatcc atttccggcc tgcgcccgcg acatgcggca tgacgccatc gaatacccgc
     1921 ctgccggccg cgtcggcgtt gtagcctcga tagacgaagt ccctcaaaca gcgcccggtc
     1981 tgtgagcggc cccaggcata agccatttgc gcgccccgca acgggttggc ttcgctttgg
     2041 tcatacttca ggaaactgac gaaatcgcgc accgcgacat ggcccagtcc catgactttg
     2101 gggtctttgg cggtatagag aagttcgtag atccagccgg gatgaaaacc ggcggggtaa
     2161 tgaatgtgcc agtcggaggg cgcgatggct cgctcgggga ccctggtttc ggcaccggcg
     2221 ccgagcactt cagtggcgaa cgaccattga tccggcgcaa tgatttcggg ttcgtcgtac
     2281 gggtagcggc gccgggtgaa caccgcgtcg cgcgtttcca tcgatgcggt gcggtacgag
     2341 tgcccggcga cccggccgct aagcgggtag cacgtggctc caggcgcatc cggaatgaac
     2401 tcaacgcgga tgcggtcggt gatgggttga ccgttatcag tggcgaccgg aacgtccagc
     2461 accatgcggt tatcgccggg cagcatgtcg ccctcccagg caatccaggc caccgcatag
     2521 ccgcgacgca tgaaaaaccc attgccggcg tgcgacagcg acaacggatc gttgctgtga
     2581 ggtgcgtcgt tgaagaactg caacgcacgc ttgtggccgc gattgccgta atcgtagaac
     2641 acccggcgat tgccgcggga cagctcgacc ggcttcagga tcatgaagtc ggctgcaaaa
     2701 tgcacgaggc cttgggcatc gcgcggcgct ttatccagat cgacgacatc gctttgcgcc
     2761 gccgccaatg gatcgaccgc gaacaacgcg cggccggtca gacgttcata ggggccggtc
     2821 tcgccaaagc tgtgtccgtt ggcaaatggg cggcgatccg tgatgtgcaa cgcgatcatg
     2881 gcgtgagcct ctgtctggtc aatcgcagca gtctatggct ccccgctgcg ttgaggaagc
     2941 tgggcttttt cgctatggtc ggagcacccg acgcggggag attgcagcaa aatgatcacg
     3001 gaccatgcgg tgagaacgcc gcggcacacc agcttttatc tcgcctgtgg tgcgccgggt
     3061 gcggtgccga tcatcttcgt gcacggctgg ccggagctgt cgatcagttg gcgccatcag
     3121 ctgccgtgct tcgccgcatt ggggtttcgc gcgattgccc cggatatgcg cggttatggc
     3181 cgctcgagcg tcccggtgcg gcatgaagat tacgccatgg aactgattgc cggcgatatg
     3241 atcgagctgc tggacagtct gggctgtgcc aaagccatct gggtcgggca tgactggggc
     3301 agcccggtgg tgtggagtat cgcgtcacat cacccagagc ggtgtcatgg cgtggcctcg
     3361 ctttgtgtgc cgtattttcc ggtcggtgcc gggtttcgtt cggcaatcga cctgatcgac
     3421 cggattatgt atcccgccgc cgagtttccc gccggtcagt gggactatca attgttttat
     3481 cgcgaaaact tcgacaaggc atgcacggtg ttcgaagcca acgtcgcggc gaccgtaaag
     3541 gcactatttc gcaaaggcga cccggccgga aagggcaagc cgtcacggtt ggcgactgtg
     3601 cgcaaagagg gtggatggtt tggcggccgt ccagaggctc ccgacctgcc gctcgacacg
     3661 gatgtgatga cggaggcgga actcagcacc tatgtcgcag cgctgacccg gaacggattt
     3721 cgcgggccgt gttcctggta caggaatccg gaggcgaacg cggcgtacca ggcaaaggcg
     3781 gtgaataacg ggcggttgga catgccggcg ctgtttctgc atgccggcta cgattacaca
     3841 tgccagacga tcgattctcc gatggccgag ccgatgcgcc aggcttgcac cgacctgacc
     3901 gaggctgagg tctcgaccgg ccattggatg gcgcaggaag atccggttgc ggtgaatgcg
     3961 gcactggcgc gatggatcgt cacgaaattg ccatcagtct ggcctggctg aggagaggga
     4021 cgcatgaaaa tcaccaaggt tgaaccgctg ctgctggatc gcttccttta cgtgcgggtg
     4081 cagaccgaca gcggcattgt cggcatcggc gagtcgggca cctggggcca gttggaagcc
     4141 tcggctgccg cgatcgccaa atatggcgac tatctggtcg gcaaggatcc gtttccgatc
     4201 gagcatcatt ggaacgtgat gctgcgcgcc aatcatttta ccggtggcgc catcaccggt
     4261 gcggtgtccg ccatcgacat tgcactgtgg gacatcaaag gcaaattctt caatgtgccg
     4321 gtctacgagt tgcttggtgg caaagtccgg cacaaggcga gactttatgg ccacgtgaaa
     4381 ggccgcacga tcgagaaact cgttgaggag gcggtccggt tgaaggaggc gggctttacc
     4441 gcgcttggcc atctcaaccc gttgctggat gagagcgaac gggacccata ctacaaatcc
     4501 catgcggcga agatcgaagg tgcgatcgac aacgttcgtc gcctgcgt
//
LOCUS       DATAVD010001562         4494 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1822422, whole genome shotgun sequence.
ACCESSION   DATAVD010001562 DATAVD010000000
VERSION     DATAVD010001562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4494
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1822422"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(970..1740)
                     /locus_tag="VHX39_30000"
     CDS             complement(970..1740)
                     /locus_tag="VHX39_30000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010667935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEX3995426.1"
                     /translation="MKIATWNVNSIRQREGHVKRWLERVQPDLLFLQEIKCETAAFPA
                     LTFQGVGYQSDAVGQKAYNGVAVLSRLPFQVVHRTLPGLPEDDAQSRYIEVEAGGLTV
                     IGIYLPNGNSRGEEGYAYKLAWMDRLAERAQTLLEADVPLVITGDFNVCPTDEDLSPG
                     ALSPGDALLRPETRARYRRLLWLGLTDAIRALHPHGRVFTFWDYQGGAWERDSGLRID
                     HALLSPTVAERLIAADPDREERNQAQPSDHVPVVIELE"
     gene            complement(1774..2634)
                     /locus_tag="VHX39_30005"
     CDS             complement(1774..2634)
                     /locus_tag="VHX39_30005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEX3995427.1"
                     /translation="MQCEEVQDLASAWLDNELSEPRAAAVAEHEAQCDACHTYISDLQ
                     ILAEQMGRLGREPAPPGLAERIRVTLAAERGTAERGAAERGAEQRGTEQRGPEQREPE
                     QRGGGERAGTVIPITASPRWRGFVQQFASMAAVCLLSVFGTWAVVHQPNSMPETEHDV
                     VAAHVRSLLQNSTIQVVSSDQHTVRPWFNGKVEFAPPVKDLTSEGFPLYGGRLDYVDG
                     HRVATLVYHHGPHTISVFVWPEGARASVTPLLTQADGLNVLSWTKDGMVWWAVSDMEV
                     SEMKELRALL"
     gene            complement(2624..3187)
                     /locus_tag="VHX39_30010"
     CDS             complement(2624..3187)
                     /locus_tag="VHX39_30010"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX3995428.1"
                     /translation="MSAAKGFEQQALPHLDAAYSLAFWLMRDRADAEDVVQDAYIRAL
                     RGFDGFRGDVIRPWLLAIVRNVAWRALAVRRRATNNVIPIEAAFGRAGDADPQPLDIA
                     SGEPSAETRLIEAGDRAALHRALDAVTPLFREVLVLREIEAMSYAEIATVLGVPQGTV
                     MSRLSRARAELRLRYKDVAQETGKHAV"
     gene            complement(3303..4415)
                     /locus_tag="VHX39_30015"
     CDS             complement(3303..4415)
                     /locus_tag="VHX39_30015"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX3995429.1"
                     /translation="MNSPLRSLLLYGIGLLILCGAGWEVWSMWQHRGTQLRATSEALA
                     ATEARGPVVRVMTVKQGPTERKITLLGDARPYVTATVYGKLGGYLAKITVDRGDMAKA
                     GDVLAVIESQETDNQYTSAVADLENKKRLAQRAAELYTRRDASQEAYDQALTNLTVAS
                     SRVAELATMKSYEMLRAPFDGTIVARFVDPGALISNAGANMTSSQPVLTIADTSKLRI
                     NIYVEQRDVPFVHVGDVADVSDASHSDRTLQAKIARTSGQLDPRTRTLFAELEVDNKD
                     GFLVPGSFVYVTLHVPIESFPEIPAAALITHGVNTFVADVGEDTVVHMRPVQLARSDG
                     VVVGLREGAKVGQRVALNVPDEVVDGSRVQPVEAGR"
BASE COUNT          848 a         1470 c         1339 g          837 t
ORIGIN      
        1 tcgacgatgt tgagtgcgac aaacccggca gcgccggtaa tcagaatggc catgcggtga
       61 tgacacaacc aggggacgga cggcgcaagt ccaggctggc aaccacacgt cccgacgcat
      121 accagggcgg cagggatacg atccgcccgg aggcaggcac gcccgcaacg acaccatcag
      181 gggcgagctt ccggccccat tcgggccgct ctacccagaa ggcggatcgt atgacttaaa
      241 taagcgatgg tagacccggt ttcacccggc gacgaaactc ctggcgcccc tgaaatcgag
      301 gtaggggcta ctggaaccga tcttcgttac tggaaagcca aggaggcggt tcggcaagga
      361 gaggccagat tagccgctca ggcagccgtt agggtggccc ttgaagcgag gtccactgcg
      421 cttaccgggt gggcggcggt tagccttctg gcaacgaccg gtgccgggtt cgcagcgaaa
      481 gacgtggccg gtctaacagg ggcgttggtt acgggtttta ttctgttcgc agcagctgtg
      541 ttgggcatcc atgctgctcg tccccgtaat ccgagtatgg tcggttatga cccaattgtg
      601 attatgtccg acactttgga aactgaactg gaagtgcttg agtccatcgg gtctggactt
      661 agtcctggaa ttcaggtgaa caacctcaga ctcaatgaaa tggccacact gcttcgatgg
      721 gcaggatggt tgctgatcgc agccccggca attggcggtg tcgtatacaa ggctgcgcct
      781 ggcgttatga aggtttccgc ggaggcactc cagcggtacc agtaggagcc ggctttgccg
      841 gaggcggcgg gggagcggga cgctttgcca taacctcgtg tagcagttgg tggaagattt
      901 cgtctagcct tcagcacgcc gcctaacccg cacacatcta taccttaacg ctccaccgat
      961 ttgggttgcc tactccagtt cgatgaccac cggcacgtga tccgacggct gcgcctgatt
     1021 gcgctcctcg cggtccggat cagcggcgat caggcgctcc gcaactgtgg gggacaacaa
     1081 cgcgtgatcg atgcgcaagc cggaatcgcg ttcccaggcc ccgccctggt agtcccagaa
     1141 tgtaaacacc cgcccgtgcg gatgcagcgc gcggatcgca tccgtcagcc ccagccacaa
     1201 cagccggcga taccgagccc gcgtctccgg ccgcagcagc gcatcgccgg gcgataacgc
     1261 cccaggcgac agatcttcgt cggtcgggca aacgttgaag tcgccggtaa tcaccagagg
     1321 aacgtccgcc tccagcaacg tctgcgcgcg ttccgcgagc cggtccatcc aggcgagctt
     1381 gtaagcataa ccctcctcgc cgcgggaatt gccgttcggc aaatagatcc cgatcaccgt
     1441 caggccgccc gcctcgactt caatatatct cgactgggcg tcgtcttccg gcagaccggg
     1501 cagcgtgcga tgcacgacct ggaacggcag gcgcgacaac acggcgacgc cgttgtaggc
     1561 cttctgcccg actgcatcgg actgatatcc gacgccctga aatgtcagcg ccggaaacgc
     1621 tgcggtttcg cacttgatct cctgcaggaa cagcaggtcg ggttgcaccc gttccagcca
     1681 ccgcttcacg tggccttcgc gctgacggat cgagttgacg ttccaggtgg cgatcttcat
     1741 aggcgcaatc agtgccacct ccgtgccccc cggtcaaagc agtgcgcgca actccttcat
     1801 ttcggatact tccatgtccg acactgccca ccagaccatg ccatccttgg tccaggacag
     1861 cacgttcagc ccgtccgcct gggtcagcaa cggcgtaacc gatgcccgag ccccctcggg
     1921 ccagacaaac acgctgatcg tgtgcggccc gtggtggtag accagcgtcg caacgcgatg
     1981 cccatccacg taatccaggc gaccgccgta gagcggaaat ccctcgctgg tgaggtcctt
     2041 gaccggcgga gcgaactcaa ccttgccgtt gaaccacggc cgcacggtgt gctgatcgct
     2101 tgaaaccacc tggatcgtgc tgttttgcag caaagaccgc acgtgtgccg caaccacatc
     2161 atgttcggtt tccggcatgg aattgggctg gtgcacgacc gcccaggtgc cgaagacgga
     2221 gaggaggcag acggcggcca tagaggcgaa ctgttgcaca aagcctcgcc agcgcggcga
     2281 tgcggtaatc gggatcacgg ttccggctcg ttcgcccccg cctcgctgtt cgggttctcg
     2341 ctgttcgggt ccccgctgtt cggtaccccg ctgttcggca ccacgttctg cggcaccacg
     2401 ctctgcggta ccacgctctg cggcaagcgt cacgcggatc cgttctgcca gcccgggcgg
     2461 tgccggttcg cgtcccaatc gtcccatctg ctccgccaaa atttgcaggt ctgaaatgta
     2521 agtgtggcaa gcgtcgcact gcgcctcatg ttcggccacc gctgcagccc tgggttcgga
     2581 cagttcattg tccagccagg cgctcgccag atcctggact tcctcacact gcatgtttgc
     2641 cggtctcctg ggcgacatcc ttgtaacgta accttaattc tgccctggcc cgcgacagtc
     2701 gcgacatcac ggtgccctgc gggacgccaa ggacggtggc gatttccgcg tacgacatgg
     2761 cctcgatttc ccgcagcacc agcacctcgc ggaacaacgg agtcacggcg tccaaagccc
     2821 ggtgcagcgc cgcccgatcg cctgcctcga tcagcctcgt ttcggccgag ggctcgccgg
     2881 acgcgatgtc gagcggctgc ggatcagcgt cacccgcgcg gccaaatgcg gcttcgatcg
     2941 ggatcacatt gttggtggcg cggcggcgca ccgcgagcgc ccgccacgcc acgttacgca
     3001 cgatcgccag cagccagggc cgtatcacat cgccgcggaa cccatcgaac ccccgcagcg
     3061 cccggatata ggcgtcctgc accacatcct cggcgtcggc gcggtcacgc atcagccaga
     3121 acgccagcga ataggccgca tcgagatgcg gcaacgcctg ttgttcgaaa cctttcgcag
     3181 cagacaagag cgcctcggtc gtggtcggtg atggagagta gataccggac gacgcgcttt
     3241 attcccgccc gttcaaaatg ttccccgccg atcaggtagg ccgaacctcg cccggatggc
     3301 cgttaccgtc ctgcctccac cggctgcacc cggctgccgt cgacgacctc atccgggaca
     3361 ttcagcgcga cccgctggcc aaccttcgcc ccttcccgca gtccaacgac cacgccatcc
     3421 gagcgcgcca gctgcaccgg ccgcatatgt accaccgtgt cttccccgac atcggcaacg
     3481 aaggtgttga caccgtgggt gatcagcgcg gccgcgggta tctccgggaa gctttcgatc
     3541 ggcacatgca aggtcacgta aacgaagctt cctggcacca ggaagccgtc tttgttatcg
     3601 acctccagtt cggcgaacag cgtgcgcgtg cgcggatcga gctggcctga cgtgcgcgcg
     3661 atctttgcct gcagggtgcg gtccgaatgg ctggcatcgg atacatcggc gacgtccccg
     3721 acatgcacga acggcacatc gcgctgttcg acatagatgt tgatccgcaa cttcgaagta
     3781 tcagcgatgg tcagcaccgg ttgcgaactc gtcatgttcg ccccggcgtt ggagatcagc
     3841 gcgccaggat cgacaaagcg agcgacgatt gtgccgtcga acggcgctcg cagcatttcg
     3901 tatgatttca tcgtcgcgag ctcggcgacg cgcgaggagg cgacagtcag gttggtcagc
     3961 gcctgatcgt atgcctcctg ggacgcgtca cggcgcgtgt ataattctgc cgctctctgg
     4021 gccaggcgct tcttgttttc gagatcggcg actgcactgg tgtattggtt gtcggtctcc
     4081 tgcgattcga tcaccgccaa tacgtcgcca gctttcgcca tatcgccgcg atccactgtt
     4141 atcttcgcca gatagccgcc aagtttaccg tacaccgtgg cagtcacata aggccgggca
     4201 tcgcccagaa gcgtgatctt ccgctcggtg ggaccctgtt tgacagtcat gacccgaacc
     4261 accggaccac gcgcctcggt tgccgccagt gcctcgcttg tggcacgcag ctgagtgcca
     4321 cgatgttgcc acatcgacca aacttcccag cctgcaccgc ataaaatcaa caggccgata
     4381 ccataaagca ataacgagcg aagcgggcta ttcatgcggc gtacctcctt cgggggatgc
     4441 gccggcggcc tcagcctcga aacgcgcatc cagcatatgc agtgccggcg ggga
//
LOCUS       DATAVD010001563         1817 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1448473, whole genome shotgun sequence.
ACCESSION   DATAVD010001563 DATAVD010000000
VERSION     DATAVD010001563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1817
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1448473"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..678)
                     /locus_tag="VHX39_30020"
     CDS             complement(<1..678)
                     /locus_tag="VHX39_30020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008892342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3995430.1"
                     /translation="MQNLEPILIFITVAEMGSFTRAADSLGIQKGRASTAVRKLEEDV
                     GVRLLHRTTRSVQLTEDGRVFHARARDLLADVDDLHSMFAGDSVALRGRLRVDLPTEV
                     ARTAIVPALPDFMASHPELELEVSTTDRQVDLVQEGFDCVLRLGPIGDETLIARPLGK
                     LRMVNAASPAYLARYGVPRSLEDLHHQKHQAIHFSTMLGARPYGWEYPDGDSYATLQL
                     PGALHVNS"
     gene            1032..>1817
                     /locus_tag="VHX39_30025"
     CDS             1032..>1817
                     /locus_tag="VHX39_30025"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA family NAD(P)-binding protein"
                     /protein_id="HEX3995431.1"
                     /translation="MFLVMGITGKVGGATAAHLLAHGKEVRALVRNREKASSWANQGV
                     ELVDGDWNDSAAIERALKGVEGAFVMLPAVWAPSPDYKEAKSVIANYVEALTKAAPPR
                     VVALSSMGANRTSGLGMITALSLLERGFRALISPIAFVRAGGFFENFLYGLQVAQGGT
                     LPVYYNPTNRKSTMVAANDIGAEVATLLTGRAWSGQRVVELGSMVTADEVAEQLGEVL
                     NLDVKAFAVPRAGWAEAFEQFGIPKGHTGPAEEMFEAVNAGWMD"
BASE COUNT          376 a          526 c          553 g          362 t
ORIGIN      
        1 gctgttgacg tgtagcgcac ctggcaactg aagcgtcgcg tagctgtcgc cgtccggata
       61 ttcccatcca tagggtcttg cgcccagcat cgtcgaaaaa tgaattgcct gatgtttctg
      121 atgatgcaga tcttctagag atcgagggac gccatagcgc gccaggtagg cagggctggc
      181 ggcgttgacc atgcgtaact tgcccaatgg gcgggcaatc agcgtctcgt ccccgatggg
      241 accaagtcgc agtacgcagt cgaacccctc ttgaaccaga tccacttggc gatccgtagt
      301 cgacacctcc agctccaact cgggatgact cgccatgaaa tccggcaagg ctggcacgat
      361 cgctgtccgt gccacctcgg tcgggagatc gacgcgtaga cgcccgcgaa gtgccacgct
      421 atcgcctgcg aacatcgagt ggagatcatc aacgtccgcg agcagatcgc gagcacgtgc
      481 atgaaatacc cgtccgtcct ccgtcaactg cacgctacgc gtcgtccggt gcagaagcct
      541 gacaccgaca tcttcttcca gcttccggac cgccgttgag gcccttccct tctgaatgcc
      601 caggctatcg gctgcgcggg tgaagctccc catttccgct accgttatga aaatgaggat
      661 gggttcgagg ttctgcattt tcgtgcccgg tattgttcac cacagagaga acagtgaatt
      721 cgtttcctcg gcatttatca tgcctgagag acacagtacc ctccgaacac tgggatcccc
      781 catcggagaa tgacacgtgt ccaaaaccat gaacctgcat caggtgcctg aaaccacgac
      841 cttgcatcgc gccctgtggt ccggccggat ttggtgagtt gggatcgccg ccggaaatca
      901 tttccctgct tctgggcgcg atgacatggg gcggcctcca cgcgcgcaat ccccgtatcc
      961 gggccattct gccgctcatc cgttgaacca acaggggcag tgctctgtcc ctcaagatca
     1021 ggagaaaacg catgttttta gtaatgggaa tcacgggaaa agtgggcggc gcaacggcag
     1081 cacatctgtt ggcgcacggc aaggaagtac gcgcgctagt ccgcaatcgc gagaaggcgt
     1141 caagctgggc gaaccagggc gtggaactgg ttgacggtga ttggaatgat tcggcagcca
     1201 tcgagcgggc gctcaaaggc gtcgaaggcg cgtttgtcat gttgccggct gtctgggccc
     1261 cctcgcccga ttacaaagaa gccaagagcg tgattgcgaa ctatgtcgag gcgctcacca
     1321 aggcagcgcc gccgcgggtg gtagcgcttt cgtcgatggg tgcgaacagg accagcgggc
     1381 ttgggatgat cacggccttg tcgcttctgg agcgaggttt tcgcgccctg atatcgccaa
     1441 tcgcatttgt gcgcgcaggt ggattcttcg aaaacttcct ctacggcttg caggtcgccc
     1501 agggcggaac gctaccggtc tactacaatc cgacaaaccg gaaatcgacc atggtcgcgg
     1561 cgaacgacat cggcgcggag gtggcaaccc ttttgaccgg gcgagcgtgg tcagggcagc
     1621 gcgtcgtcga gcttggttcg atggtcaccg cggatgaagt cgcggagcaa ttgggcgaag
     1681 tcctgaatct cgacgtgaaa gcctttgcag tcccgcgtgc agggtgggcg gaagcgttcg
     1741 agcaattcgg catcccgaag ggccacaccg gacctgccga agaaatgttt gaggccgtga
     1801 atgcaggatg gatggac
//
LOCUS       DATAVD010001564         2273 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2942127, whole genome shotgun sequence.
ACCESSION   DATAVD010001564 DATAVD010000000
VERSION     DATAVD010001564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2942127"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..848
                     /locus_tag="VHX39_30030"
     CDS             <1..848
                     /locus_tag="VHX39_30030"
                     /inference="COORDINATES: protein motif:HMM:NF018938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HEX3995432.1"
                     /translation="DVIVAGRACDTAIFASLPALLGFPVGLAMHMAKIIECGSLCCVP
                     GGRDPILAELDHDGFVLESMNPERRATPTSVAAHSLYEQSDPFTMQEPDGTLDLTHAR
                     YEAEDDRRTRVSGATWRDSTQPTIKLEGARKIGERAVLLCGSADPRFIAQCKALLPKV
                     ADLVQSLVCEEQPMDYTLRFRVYGIDGVRMVVPENEPPPGEVFIMGECIAPTRERASE
                     VVRTCKQFLLHFGYPGRLSTAGNVAFPFTPPEVSLGPAYRFNVYHLLHVDDADALFPV
                     EVESV"
     gene            complement(1206..1955)
                     /locus_tag="VHX39_30035"
     CDS             complement(1206..1955)
                     /locus_tag="VHX39_30035"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3995433.1"
                     /translation="MPPFPLPVPLSMQGKRVVVTGAASGIGKATALVLAQLGGEVVIC
                     DRAGMDSTRDEIEAAGGTCSVSQGDLTDDAFLASFFTGDRVHAVAHCAGILNGRPWRE
                     DTAWHDRFHQLMDVNVRVPLQLAALAIDHMAAHGGGHIALVGSVAGKTGGTSPTTPPD
                     YVASKGAVHALVKWLSRNAVGRGVLVNAVAPGPVETPMTRGFNLGPTLPMGRLGRPEE
                     LAWPIAFLCTPAASYLSGAILDVNGGAFVGP"
     gene            complement(2025..>2273)
                     /locus_tag="VHX39_30040"
     CDS             complement(2025..>2273)
                     /locus_tag="VHX39_30040"
                     /inference="COORDINATES: protein motif:HMM:NF024297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX3995434.1"
                     /translation="DGELTDLPREKWLESVRSRKSAQSQDLPRNDFIVHIDRSSPTTA
                     FAKVQCQIPPRYFTDYLTFVKLAGGWKIVSKTYHTDTR"
BASE COUNT          378 a          723 c          757 g          415 t
ORIGIN      
        1 tcgatgtgat cgtggcggga cgcgcctgcg atacggcgat tttcgcatcg ctgccggcgt
       61 tgctgggatt tccggtcggg cttgccatgc acatggccaa gattatcgag tgcggctcgc
      121 tgtgctgcgt tccgggcggg cgcgatccga tcctggcgga gctggaccat gatgggtttg
      181 tgctggagag catgaacccg gaacgccggg cgaccccgac ctcggttgcc gcgcacagtc
      241 tctatgaaca gtccgatccg ttcacgatgc aggagccgga cggcacgctg gatctgacgc
      301 atgcgcgcta tgaagccgag gatgatcgcc ggacgcgggt cagcggcgcg acgtggcggg
      361 actcgacgca gccgacgatc aagctggaag gggcgcggaa aatcggcgag cgggcggtgc
      421 tcctgtgcgg gtcggctgat ccgcgcttca tcgcgcagtg caaggcgctg ctgccgaagg
      481 tcgccgacct ggtgcagagc ctggtctgcg aggagcagcc gatggactat acgctgcggt
      541 tccgggtgta cggcatcgac ggggtgcgca tggtggtgcc ggaaaacgag ccgccgccgg
      601 gtgaggtttt catcatgggg gaatgtatcg cgccgacccg cgaacgtgcc tcggaagtgg
      661 tgcgcacctg caaacagttc ctgctgcatt tcggctatcc cggccggctg tccacggccg
      721 gcaacgtggc gtttccgttt acgccgccgg aagtttcact cgggccggcc tatcgcttca
      781 acgtgtatca cctgctgcac gtggacgacg cggacgcctt gtttccggtg gaggtcgaaa
      841 gcgtctgata ccaacccgcg ttgatgcaga ctcttctgtt gaccccatcc gtcatgccgg
      901 tctgttgacc ccatccgtca tgccggcgca tgccggtatc cacgcctttt acgagcaaaa
      961 acaaagccat ggatggcgat cgcgctcaac atgacgagcg catggcgctg ccgatgggtc
     1021 aacatcaagg gcgattggta tgataccagc ttgcattagt ccgcctctcc accggcggcc
     1081 gcccagtcat aacgacgaac gtcggaatcc acgccttttt gcccttccaa tcaggtgagc
     1141 cctcgctctc cgggacgacg aaaggccaac gcgtcagtct ttcggcgggc tggtatgaac
     1201 cgccgctacg gcccgacaaa cgcgccgccg ttcacatcca gaattgcccc ggacagatag
     1261 ctcgcagccg gcgtgcagag gaaggcgatc ggccaggcca gttcctcggg gcgcccgagg
     1321 cggcccatcg gcagagtggg cccgaggttg aagccgcggg tcatcggcgt ttccaccggc
     1381 ccgggcgcca ccgcgttcac cagcacgccg cgacccaccg cgttgcgcga cagccatttc
     1441 accagcgcat gcaccgcgcc cttggaggcg acgtaatccg gcggtgtggt tggcgatgtg
     1501 ccgccggtct tgccggcaac cgatccgacc agggcgatgt ggccgccgcc atgcgccgcc
     1561 atatgatcga tcgccaaagc cgcgagttgc agcggcaccc gcacgttcac atccatcagt
     1621 tgatgaaagc ggtcatgcca ggccgtgtcc tctcgccacg ggcgtccgtt caggatgccg
     1681 gcgcagtgcg ccacggcatg cacccggtcc ccggtgaaga acgaggcgag gaaggcgtcg
     1741 tcggtcaggt cgccttgcga caccgaacat gtgccgccgg cggcctcgat ttcgtcgcgg
     1801 gtggagtcca tcccggcacg gtcacagatc acgacctctc cgccgagttg ggcgagcacc
     1861 agtgcggtcg ccttgccgat gccgctggcg gcgccggtca ccacgacgcg cttgccctgc
     1921 atggacagcg gcacgggcag agggaatggg ggcatcgcgg cgttcctccg gactgtttgg
     1981 ccggatcatc ccgccgctat gcgcgtctgt ccaatccgcc gggatcagcg tgtgtcggtg
     2041 tggtacgtct tcgagacgat cttccagccg cccgccagct tcacgaatgt caggtagtcg
     2101 gtgaaatagc gtggcgggat ctggcattgc accttggcga acgccgtggt ggggctggag
     2161 cggtcgatat gcacgatgaa atcgttgcgc ggcaggtcct ggctttgcgc ggatttccgc
     2221 gaccgcaccg attcgagcca tttctcgcgt ggcaagtcgg tcagttcgcc gtc
//
LOCUS       DATAVD010001565         3234 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_152670, whole genome shotgun sequence.
ACCESSION   DATAVD010001565 DATAVD010000000
VERSION     DATAVD010001565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3234
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152670"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            123..2057
                     /locus_tag="VHX39_30045"
     CDS             123..2057
                     /locus_tag="VHX39_30045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008850779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate sugar
                     epimerase/dehydratase"
                     /protein_id="HEX3995435.1"
                     /translation="MAAARSLIRIGVNVAIDGVLAGLAVPLAWWITDPTAAVPSAALT
                     IPMGAAALLVAGLPFRLSQQYWRFAGMADLLAVTASSALGAVLFSLLLFARGMGPPSI
                     GFPLAHGLTLLALLGAPRVSYRWLRSREPVQVAQADATAVLVVGQTEDCDLFLRALGR
                     DRRQRFRVEGVLTPGDQQTGRRIQGYSILGPIKDAGSVLQRLRDDGRLPGTLVMATPD
                     LQGGALASVVAQADRFGLRVRRAPRLTELDQGSASGEPRPVELRPIMIEDLLNRPQVP
                     LDRDGMARLIQGRRVVVTGAGGTIGSELARQVAAFGPGSLVLIDNGEFALWQIDMELA
                     ETFPNVRRQSLIADIRDEARIRSVFDGIRPDLVFHAAALKHVPIVEDNPLEGLMTNAA
                     GTRHVADAARASGAVAMVLISTDKAVNPTSVMGASKRLAEMYCQALDIVARKTGVGMR
                     CITVRFGNVLGSTGSVVPLFQRQLARGGPLTVTHPDMQRYFMTVREAVGLVLQANVIG
                     VGEAQLPADQDGGIFVLDMGEPVKIVDLARQMIRLAGLKPDEDVEIRFTGLRPGEKLY
                     EELFHGKEPPAPTGHPGLLMAHPRTADPAIVGRAIEEIATACRGNQSRLALTLLSRLI
                     PEFERNTDGLQTDARASTGA"
     gene            2098..>3234
                     /locus_tag="VHX39_30050"
     CDS             2098..>3234
                     /locus_tag="VHX39_30050"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEX3995436.1"
                     /translation="MPATKPSVPFLDLPAQQARIRDDLRRRLDAVLQHCQFILGPEVA
                     ELERELAAFCGAKHCVSVSSGTDALQIAMMAEDVGRGDAVFLPAFTYTATAEVPLVLG
                     ATPVFVDVDPRTYQIDPAHLRQRIASVRKAGKLRPRAVIGVDLFGQPADWPALSAIAV
                     TEGLITIDDLAQSFGASLHGKPLGSQADVTATSFFPSKPLGAYGDGGALFTENDERAE
                     LYRSLRTHGEGKTRYEVLRTGMNGRLDSIQAAVLLAKLTVFPDELVAREKIAAYYDHR
                     LGNTLTIPARVPDSTAAWAIYSVLLPEGCNRASVQDTMRADGVPTAIYYPRPLHRQPA
                     YREHHDGTALPVSDHLADRILALPIHPDMDEAAAAHVCDALVAAV"
BASE COUNT          523 a          992 c         1082 g          637 t
ORIGIN      
        1 ggtgcatcac tatcgggcgg gtcgcggatg cgtcaagcag cgatgacggc gcctaccctg
       61 ggtaagacaa ttgctcctgc ctggggtatg acggggtcgc aacatcgcgc tataggagcg
      121 gcatggctgc ggcgcgctct ctgattcgca tcggcgtcaa tgtcgccatc gacggcgtcc
      181 ttgcgggcct ggctgttcca ttggcctggt ggatcaccga tcccactgca gcggttcctt
      241 ccgccgcttt gaccatcccc atgggcgcgg ccgcattgct tgttgccggt ctgccgttcc
      301 gactgtcgca gcaatattgg cgctttgccg ggatggcgga cctgcttgcc gtcactgcca
      361 gttccgcgct cggtgccgtc ttgttttccc tgcttctttt tgcacgtgga atgggtccac
      421 ccagcatcgg atttccactt gcgcatggcc tgacgctcct cgcgctgctc ggcgcgccca
      481 gggtgagtta tcggtggttg cgctcgcgtg agccggttca ggtcgcgcag gctgacgcca
      541 cggcggtgct ggtcgtcggt cagactgaag attgcgacct tttcctccgc gctttgggac
      601 gcgaccggcg acagcgcttt cgggtggagg gcgtgctgac cccgggcgat caacagaccg
      661 gacggcgcat ccaggggtat tcgattctcg gccccataaa ggacgccggt tcggtgctgc
      721 agcggctgcg tgatgacgga cgtttgcccg gcacattggt aatggcgacg ccggatttgc
      781 agggcggcgc cctggccagc gtggtcgcgc aggcggatcg cttcggcctt cgggtgcggc
      841 gtgcgccgcg gttgaccgaa ttggatcagg gctcggcgtc cggtgagccc aggccggtcg
      901 aactgcggcc aattatgatc gaggatctgc tcaatcggcc gcaggtgcca ttggaccgcg
      961 acggaatggc gcggctgatc caagggcgcc gggtcgtcgt gacaggcgcc ggcggcacga
     1021 tcggcagcga gctggcccgt caggtggcgg cgtttgggcc tggcagcctg gtattgatcg
     1081 acaacggcga gttcgcgctc tggcagatcg acatggagct ggcggagacg tttcccaatg
     1141 tccgccgcca atcgctgatc gcagacattc gtgacgaggc gcggatccgt tccgtgttcg
     1201 acgggatccg tccggatctg gtgttccacg ccgctgccct gaagcacgtg ccgatcgtcg
     1261 aggacaaccc gctggaaggc ctgatgacca acgctgccgg cacgcgtcac gtggccgatg
     1321 cggcgcgggc gtccggcgct gtggcgatgg tgctgatctc gaccgacaag gcggtcaatc
     1381 cgaccagtgt gatgggcgcg tccaagcggc tcgcggaaat gtattgtcag gcactggata
     1441 tcgtcgcacg caagaccggt gtcggcatgc gctgcattac ggtgcggttt ggcaacgtgc
     1501 tcggcagtac cggatcggtg gtgccgctgt ttcaacgtca gctcgcgcgc ggcggaccgc
     1561 tgaccgtgac ccatccggac atgcagcgtt atttcatgac agtccgcgaa gcggtcggcc
     1621 ttgtgctgca ggcgaatgtg atcggcgtcg gcgaagcgca actgccggcc gaccaggatg
     1681 gcgggatttt cgtgctggat atgggcgagc cggtgaagat cgtcgacctc gcccggcaga
     1741 tgatccggct cgccggattg aagccggacg aggatgtcga aattcggttc accggcttgc
     1801 ggccaggcga aaagctttat gaggaactgt tccacggcaa ggaaccgccg gcgccgaccg
     1861 gccatcctgg cctgctgatg gcgcaccctc gcaccgccga ccctgccatc gtcggccgag
     1921 ccattgagga aatcgccacc gcatgccgcg gtaaccagag ccgcctcgcg ctgacgttgc
     1981 tcagccggct gatcccggag ttcgagcgca ataccgacgg gttgcaaacg gatgcccgtg
     2041 ccagcacggg cgcgtgaagc ttttccgtcg acgcgttaag tttggagcct gatccgtatg
     2101 cctgcaacga agccgtccgt gccgtttctc gatttgcctg cgcaacaggc gcggatcagg
     2161 gacgatttaa ggcgccgcct ggatgcggtg ctgcaacatt gccagttcat tcttggcccc
     2221 gaggtggcag agctggaacg agaactcgcg gcattctgcg gggcaaagca ttgcgtatcg
     2281 gtcagctccg gcacggatgc gttgcaaatt gccatgatgg cggaggacgt cggccgaggc
     2341 gatgcggtgt tcctgccggc cttcacctac acagccacgg ccgaggtgcc gttggtactg
     2401 ggcgcgactc cggtcttcgt cgatgtcgat ccgcggacgt accagattga cccggcgcat
     2461 ttgaggcagc ggatcgcctc ggtcaggaag gccggcaagt tgcgtccgcg ggcagtgatt
     2521 ggcgtcgatc tgttcggtca gccggcagat tggccggcgc tctcggcgat tgcggtgacc
     2581 gaagggctga tcacgatcga cgatctggca caaagcttcg gcgcgtcgct gcacggcaag
     2641 ccactgggtt ctcaggccga cgtcacagca acctcattct ttccgtcgaa gcccttgggc
     2701 gcgtacggcg acggtggcgc tttgttcacc gaaaacgacg agcgcgcgga gttgtaccgc
     2761 agcctgcgca cgcatggtga aggcaaaacc cgttacgaag ttctacggac cgggatgaac
     2821 ggccgtctgg actcgattca ggcggcggtg ctgcttgcga aactgaccgt gtttcccgac
     2881 gaacttgtcg cgcgcgagaa aatcgccgct tattatgacc atcgccttgg caacaccctg
     2941 acgattcccg cccgcgtgcc cgacagcacc gccgcctggg cgatttactc cgtattgcta
     3001 ccggaaggat gcaaccgggc ttcggtgcag gacactatgc gggcggacgg cgtgccaacg
     3061 gcgatctact atccgcggcc actgcatcgc cagccggcct atcgcgagca tcatgatggc
     3121 actgcgcttc cggtttccga tcacctggct gaccgcattc tggcgttacc gattcacccc
     3181 gatatggatg aggccgcagc cgctcatgtt tgcgacgcgt tggttgccgc tgtc
//
LOCUS       DATAVD010001566         2085 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1638281, whole genome shotgun sequence.
ACCESSION   DATAVD010001566 DATAVD010000000
VERSION     DATAVD010001566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1638281"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..593
                     /locus_tag="VHX39_30055"
     CDS             <1..593
                     /locus_tag="VHX39_30055"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEX3995437.1"
                     /translation="AFRTTMDTIPAPVPYLRANPSPWAEFLGTLPGLKVGLVWAGLSR
                     TAQPHAVAIDKRRSMRLAEMAPLFSVPGCDFVSLQLGGPAAQRHALFEGTVLHDVSDH
                     LADWTDTANLIAGLDLVIAVDTAVAHLAGALGKPVWLLNRFDSCWRWFLNRDDTPWYP
                     TMRQFRQATRGDWPGVIERARQALRQASRDRLQNLI"
     gene            724..1653
                     /gene="cyoA"
                     /locus_tag="VHX39_30060"
     CDS             724..1653
                     /gene="cyoA"
                     /locus_tag="VHX39_30060"
                     /inference="COORDINATES: protein motif:HMM:TIGR01433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009486 - cytochrome bo3 ubiquinol oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0015990 - electron transport coupled proton
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol oxidase subunit II"
                     /protein_id="HEX3995438.1"
                     /translation="MSPKPDGSRESQSLWRRHRQIGALLAFLFLTGCDAAVLDPQGTV
                     GIADRTILIDSLAIMLAIVVPTILATLGFAWWFRASNTRARYLPDFAYSGQLELIVWG
                     IPLLVITLLGGVAWIGAHSLDPYQPLASKTKPLQVQVVSLDWKWLFIYPDQQIASVNT
                     LEIPAGTPVHFTLTSASVMNAFFIPQLGSMIYTMNGMTTQLNLSADVPGTFAGLSSHF
                     SGDGFSGMHFTVHAVPPDQFAAWVDATRKSGPTLDPNTYKTLAQQSMDTVPYTYRSAD
                     PGLFRQIVTQQLPPGPGPTIGRPNPTVSPRTPS"
     gene            1656..>2085
                     /locus_tag="VHX39_30065"
     CDS             1656..>2085
                     /locus_tag="VHX39_30065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019087776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX3995439.1"
                     /translation="MLGKLTWAAIPFDQPIPLFAAALVGVVITAVLAWVVLKGWFPYL
                     WREWITSVDHKRIGVMYIFLAMVMLLRGFTDAIMMRTQQALAAGGAQGYLPPKHYDQI
                     FSAHGTIMIFFVAMPFVIGLMNLIVPLQLGVRDVAFPTLNS"
BASE COUNT          336 a          767 c          587 g          395 t
ORIGIN      
        1 acgcgtttcg caccacgatg gacacgatcc ccgcaccggt cccgtacctg cgcgccaacc
       61 cgtcgccctg ggccgagttt ctgggcacgt tgcctggcct gaaagtcggc ctggtctggg
      121 ccggcctgtc ccgcaccgcc cagccgcacg cggtggcgat cgacaagcgc cgctccatgc
      181 gcctggccga gatggcaccg ctgttctcgg tccccggctg cgatttcgtg tcgctgcaac
      241 tcggtggacc ggcggcgcag cgtcatgcgc tgttcgaggg cacggtgctg cacgacgtgt
      301 ccgaccatct ggccgattgg accgataccg cgaacctgat cgccggcctg gacctagtga
      361 tcgcggtcga taccgccgtc gcccatttgg cgggcgcact gggcaagccg gtctggctgt
      421 tgaaccgctt cgattcttgc tggcgctggt tcctgaaccg agacgatacg ccctggtacc
      481 ccaccatgcg gcagttccgc caggccacac gaggcgactg gcccggcgtc atcgaacgcg
      541 ccaggcaggc gttgaggcag gccagtcgag accgccttca gaatctgatc taagaagcgt
      601 agatcgtcgg taacccgcct gcgatccccg caggcgggac ccggccgtcc tgatccattg
      661 acgccgtccc ttcaccggga agtgcttcgc ccgccgccac ccaatgccgt aaactcatcc
      721 gtgatgagcc ccaagccaga cggttcgcgg gaaagccaat ccctttggag gcgccaccga
      781 caaatcggcg ccctcctggc gttccttttc ctgaccggct gcgacgccgc cgtcctagac
      841 cctcagggca ccgtcggcat cgccgacagg accatcctga tcgactccct cgccatcatg
      901 cttgccatcg ttgtgcccac gatcctcgcg accctcggct tcgcctggtg gttccgagcg
      961 tccaacaccc gcgcccgcta ccttccggac ttcgcctatt ccggccaact cgaactcatc
     1021 gtctggggta tcccgctcct cgtcataacg ctcctcggcg gcgtcgcctg gatcggtgcg
     1081 cacagcctcg acccctatca gccgctcgcc tccaagacca agccgttgca ggtccaggtc
     1141 gtctcactcg actggaaatg gctgttcatc taccccgacc agcagatcgc cagtgtcaac
     1201 acgctggaga ttcccgccgg cactcccgtt cacttcacct tgacttcggc gagcgtcatg
     1261 aacgcgttct tcatccccca gctcggcagc atgatctata cgatgaacgg catgacgacg
     1321 cagctgaacc tgagcgccga cgtgccgggc accttcgccg gcctgtccag ccacttcagt
     1381 ggcgacggct tctccgggat gcatttcact gtccacgcgg tgccgccgga ccagttcgcc
     1441 gcctgggtcg acgccacccg caaatccggc ccgaccctcg atcccaacac ctataaaacc
     1501 ctggcgcagc agagcatgga caccgtcccg tatacttacc gttcggctga tcccggattg
     1561 ttccggcaga tcgtcaccca gcaactgcca cccggaccgg gtccgactat cggccgtccc
     1621 aaccccaccg tgtcgccgcg gacgcctagc tgaccatgct cggcaagctc acctgggcgg
     1681 ccatcccgtt cgaccagcca atcccgctgt tcgccgccgc cctggtgggt gtggtgatca
     1741 ccgccgtcct cgcctgggtc gtcctgaagg gctggtttcc ctatctgtgg cgggagtgga
     1801 ttaccagcgt cgaccacaag cgcatcggcg tcatgtacat cttcctggcg atggtgatgc
     1861 tgctgcgcgg ctttaccgac gcgatcatga tgcggaccca acaggcgctc gcggccggtg
     1921 gtgcgcaagg ctacctgccg ccgaagcact acgaccagat attctcggcg catgggacga
     1981 tcatgatctt cttcgtcgcc atgcccttcg tcatcggcct gatgaacctc atcgtgccgc
     2041 tgcagctcgg ggtccgtgac gtcgctttcc cgacgctcaa ttccg
//
LOCUS       DATAVD010001567         4442 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2010375, whole genome shotgun sequence.
ACCESSION   DATAVD010001567 DATAVD010000000
VERSION     DATAVD010001567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4442
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2010375"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1243)
                     /locus_tag="VHX39_30070"
     CDS             complement(<1..1243)
                     /locus_tag="VHX39_30070"
                     /inference="COORDINATES: protein motif:HMM:NF015592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995440.1"
                     /translation="MSDAFASTPEAGWTLENEGYDVRSENNVEARLAIGNGFLGVRAA
                     RSISRAPTWLSFLPGQTWTSWPRTYVAGLFDTPNTDPPVPALVPLADWLRVRVILDGE
                     PLLLRTGQTMLHRRTLDMRRGVLIGNWQQRTPSGAVVQVRSLHLVSLADRAIGFQQVQ
                     LVIDGKPSDAVMEASFECAGLGMQTQHLEQNLGVWCTTQNRRSVAMAGDATLSASGRQ
                     LISAAPIPLTWRWNWTSTPGETVCLTRFVAVARGDAPDADPAAAVRDALTRATSVGWR
                     AVLSAHEAAWAARWEDSDLAVDGDSAAATALRFAVYHLNSAANPHDERVSIGARALTG
                     DSYLGHVFWDTEIYLLPFYILTWPEAARALLLYRFHTLRGAREKAAAGGWRGAMYAWE
                     SADTGEETTPDRVMTQGGKLVD"
     gene            complement(1247..1987)
                     /locus_tag="VHX39_30075"
     CDS             complement(1247..1987)
                     /locus_tag="VHX39_30075"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEX3995441.1"
                     /translation="MIGALPRDGRRSLSAVIFDVDGVVVASPHEQAWREALAGLTDPE
                     RLTTAIYQTYVAGKPRMDGARAVLAQLGLVDTGGLAQRYADAKQQLIVTLIADGKFAA
                     FPDALRFIEAVKRPGWRLALASSSKNTASMLRQIAMPSGQKLLALFDADLSGIDLQHG
                     KPDPEIFIRAANAIGVSREHCLVVEDAQSGIAAGVAGGMATLGVARLDDAALLRNAGA
                     DLVVTTLDDVDTDALAEGWLHVRTEESI"
     gene            complement(2166..3854)
                     /locus_tag="VHX39_30080"
     CDS             complement(2166..3854)
                     /locus_tag="VHX39_30080"
                     /inference="COORDINATES: protein motif:HMM:TIGR01444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEX3995442.1"
                     /translation="MTRRSGCLNRSRDFVTWPHFNPGQWIDTNPTFIRLSADDAWAVF
                     TRYRFPPEPGSGSVWVVRLDGQMQPACIPMQIIDHGIDPRVVRIGGRLLIFYAMIEHD
                     SEGQINGSCMAVAEFGIIGDDWIQGRTFQLPKHPINNVLPRDAQQSWEKNWVPFAIDQ
                     FQRADNEENGFQIGLIYSHDPWYVVTLGVGPDRPRFENVYGASGIQWDFGTIRGGTPP
                     VPYDDTHLVTFFHSAQLIGSRNVYSVGACVFLAEAPYTPVFVTSDPLLIAPYHSGSHR
                     FGWHSAVSVVFPLGAERTAEGYRLLCGRDDGEIASFMVSHDELSTRLDAPQHGPTGTV
                     HDYRGGTGARLPLKSLLYVPDPIPAIPELPMINFVRTIAGRGRTFVDVGSHIGFYTMG
                     LAPGFQRVIAFEPSRFQYEWLRRNATLNAYDHVECEHVALGDAPGTATLNVLSYEGGL
                     NSLVPEVAKDRTILDNYAVRIEVLDDRNLTDVDLLKIDVEGFEIQVLRGAARTIAASR
                     PVILIEVWADTGRRRDVKRMMNDMRYSLEFLFPLSPELAVCLPLERRHEYRWFI"
     gene            complement(4159..>4442)
                     /locus_tag="VHX39_30085"
     CDS             complement(4159..>4442)
                     /locus_tag="VHX39_30085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014200290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995443.1"
                     /translation="LVEPAYVSPMGPVAPLDMIYGFRPSLAQGNVFMAHHTGFIGQSL
                     SNALLEAGFAATLAQRDPNSMSLWALGFRDPQTQEQFRKAQQRFLPLKM"
BASE COUNT          868 a         1375 c         1357 g          842 t
ORIGIN      
        1 cgtcgaccag cttgccgccc tgcgtcatga cccggtccgg tgttgtttcc tcaccggtgt
       61 cggcggattc ccacgcgtac atcgcgcctc gccagccgcc ggccgctgct ttctcccgcg
      121 cacctcgcag ggtgtgaaag cgatacagca gaagcgcacg cgccgcctcc ggccacgtca
      181 ggatatagaa cggcagcaga taaatttcgg tgtcccagaa gacatggccg agatagctgt
      241 cgccggtcag cgcccgcgca ccgatcgaga cacgctcgtc gtgaggattg gccgcgctgt
      301 tcaggtgata cacggcgaag cgcagtgccg ttgcggcagc gctgtcgccg tccacggcga
      361 ggtcactgtc ctcccagcgg gctgcccagg cggcttcatg cgcagatagt acggcgcgcc
      421 agccaacgga ggtcgcgcgg gtgagggcgt cgcgaacggc cgcggcagga tcggcgtccg
      481 gcgcgtcgcc gcgtgcgact gcaacgaagc gtgtgaggca gacggtctcg ccaggcgttg
      541 aggtccaatt ccagcgccat gtcagcggga ttggcgctgc ggaaatcaat tgtcgaccgg
      601 atgccgacag cgtcgcatca cctgccatcg ccacggaccg gcggttctgc gtcgtgcacc
      661 acacgccaag gttctgctcg aggtgctgcg tttgcatgcc cagaccggcg cattcgaacg
      721 atgcttccat aacagcgtcg gacggtttgc cgtcaatcac cagctgcacc tgctggaacc
      781 cgatggcccg atcggcgagc gatactaaat gcaggctcct tacctggacg accgccccgg
      841 atggcgtccg ttgctgccag ttgccgatca gcacgccccg ccgcatgtcg agcgtacgcc
      901 ggtgcagcat tgtttggccg gtgcgcagca gcaatggctc accgtcaagg atcacgcgga
      961 cccgcagcca gtccgcaagc ggaaccagcg ccggcaccgg tgggtcggta ttcggcgtgt
     1021 cgaaaaggcc ggctacataa gtgcggggcc acgaagtcca ggtttgccca ggcaggaagg
     1081 aaagccaggt cggagcgcgg ctgatcgagc gggcggcgcg aacccccagg aacccgttcc
     1141 cgatggcgag gcgcgcttcc acgttgttct cgctccgaac gtcgtagccc tcgttctcca
     1201 gggtccaccc ggcctccgga gttgacgcaa acgcgtcaga cattggtcag atactctcct
     1261 ctgttcggac gtgtagccag ccctcagcca gggcgtcggt gtcgacatcg tccagggtgg
     1321 tcaccaccag atcggcgccg gcgttgcgca gcaatgctgc atcatccagc cgggcaacgc
     1381 ccagagtggc catgccgccc gccacgcccg cggcgatgcc cgattgcgcg tcctcgacga
     1441 cgaggcagtg ttctcggctg accccaatcg cattggcggc ccggataaag atttccggat
     1501 ccggcttgcc gtgttgcagg tctataccgc tgaggtcggc gtcgaacagc gccagcagct
     1561 tttgcccgga cggcatcgcg atttgccgca gcatcgacgc ggtattcttg gacgatgagg
     1621 caagagcaag acgccagccg ggccgcttga ccgcctcgat gaagcgtaac gcgtcgggga
     1681 acgcggcgaa cttgccgtcg gcgatcaacg ttacgatgag ctgttgcttg gcatctgcgt
     1741 aacgctgtgc gaggccgccg gtatcgacaa gacccagttg ggccaacacc gcgcgcgcgc
     1801 cgtccatacg tggtttgcca gcaacgtacg tttgataaat ggcggttgtc aggcgttcag
     1861 gatccgtgag gccagccagc gcctcgcgcc aggcttgctc gtgtggtgag gcgacgacca
     1921 ccccgtccac gtcgaaaatg acggctgaca aggaacggcg gccgtcgcga ggaagtgccc
     1981 cgatcatgat tcagatacca ccgctgttcg cgcgccgagt ccagcatgct cagaacacct
     2041 gcgcggcatt cgggcttcgt cgtcgatccg gggctccgcg caatgtggcg tcttagagcc
     2101 tgtccgagat catgccgttt ccctgcttgg ccggatccca gcatgaccaa ggaccctgta
     2161 gcccgttaaa tgaaccaccg gtactcgtgg cgacgctcca gcggcagaca caccgcaagt
     2221 tctggcgaca gtgggaaaag aaattccagg ctgtatctca tatcgttcat cattcgcttc
     2281 acgtcccgtc gccggccagt gtctgcccac acctcgatga gaatgacagg ccggctagcc
     2341 gcgatggtcc gcgccgcgcc acgcagcacc tggatctcga atccttcgac atcgatcttc
     2401 agcaggtcga cgtctgtgag attcctatcg tccagcactt cgatccggac cgcgtagttg
     2461 tccaggatcg ttcggtcctt cgcaacctcg gggaccagtg agttcaggcc gccttcgtag
     2521 ctcaggacat ttagcgtcgc ggtcccagga gcgtcgccaa gtgcgacatg ctcgcactcg
     2581 acatgatcat aggcgttgag ggtggcgttg cgccggagcc actcatattg aaaccgtgat
     2641 ggctcgaatg cgatgacgcg ttgaaagcct ggcgccagcc ccatggtgta gaacccgata
     2701 tgcgatccga cgtcaacgaa ggtgcggccc cggcctgcaa tcgtgcggac aaagttgatc
     2761 atcggcagtt cggggatcgc cgggatcggg tcgggtacgt aaagcaggct cttgagtggt
     2821 aggcgcgcac cagtgccacc tcggtagtcg tgtacggttc cggtcgggcc gtgctgcggc
     2881 gcgtcgaggc gcgtcgaaag ctcgtcgtgg ctcaccataa aggatgcgat ttcgccgtcg
     2941 tcacggccgc acagcaggcg gtagccctcc gctgtgcgtt cggcgccaag cggaaacacc
     3001 acgctgaccg cggaatgcca accgaaacgg tggctcccgc tgtggtatgg ggcgatcagc
     3061 agtgggtcgg atgtcacgaa aaccggagtg tacggtgcct ccgccagaaa aacacaagcg
     3121 ccgacgctat aaacgttccg actcccgatt aactgggcgg aatgaaagaa agtcaccaga
     3181 tgggtatcgt cgtacggaac cggcggcgtt ccaccacgga ttgtcccgaa atcccattgg
     3241 atacccgacg cgccataaac attctcgaat ctcggacgat caggcccgac gccaagtgtg
     3301 accacatacc aaggatcatg ggaataaatc aggccgatct gaaagccatt ttcctcattg
     3361 tcggccctct ggaattgatc gatggcaaaa ggcacccagt ttttttccca gctttgctga
     3421 gcgtcgcgcg gcagaacgtt gttgatgggg tgcttcggta actgaaaggt cctcccctgg
     3481 atccaatcgt cgccgattat tccgaactca gccaccgcca tgcaggagcc gtttatctgt
     3541 ccttcggaat catgctcgat catcgcatag aaaatcagca agcgtccgcc gatgcggacc
     3601 acacgcgggt cgataccatg gtcgatgatt tgcatgggaa tgcaggcagg ctgcatctgc
     3661 ccgtcgagtc gcacgaccca aacagatcca ctacccggct ccgggggaaa gcgatagcgg
     3721 gtaaacaccg cccaggcgtc gtcggcgctt aatcgaatga aggtcgggtt cgtgtcgatc
     3781 cattggcctg gattgaaatg cggccaggtg acaaagtcac ggctgcggtt tagacagccg
     3841 gaccgccgcg tcaaactttc gcctggtcgg cttgtcagct tgtaatctgg ttccagctcg
     3901 tcaggcgggg ccgttggggc ctcggacagg tctgcaacat cggagaaatg attcacttct
     3961 gccttgcctt cctatataca acccgcgcag caaagtacct tggggcaacc gcctgacggc
     4021 cgcactgatt ctgctgttgg tgtcctcgtc tttgaggagc gatgccacgg gcgcaatatc
     4081 actctggttt caaatcaaat cgtagcagaa accttttggc tcgttttcgt cacacctcga
     4141 aggccgcgaa atccggaatc acattttgag cggaagaaat cgttgctggg ctttgcgaaa
     4201 ctgttcctgg gtctgcggat ctcggaagcc gagcgcccac agggacatcg agttcgggtc
     4261 gcgttgcgcg agtgttgccg cgaatccggc ttccagcaac gcattcgata gcgactggcc
     4321 aatgaacccg gtatggtggg ccatgaacac atttccttgc gccaacgatg gccgaaatcc
     4381 atagatcatg tccagcggcg cgacagggcc catcggcgac acatatgcgg gttcgaccaa
     4441 tt
//
LOCUS       DATAVD010001568         4701 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3498754, whole genome shotgun sequence.
ACCESSION   DATAVD010001568 DATAVD010000000
VERSION     DATAVD010001568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4701
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3498754"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..1384
                     /locus_tag="VHX39_30090"
     CDS             167..1384
                     /locus_tag="VHX39_30090"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3995444.1"
                     /translation="MFNHTSYDVLIVGARCAGAATAMLLARSGLRVLAVDHGSYATDT
                     LSTHALMRGGVMQLHRWGVLPRIVAAGTPPIRRTAFHYGDAVTEITLKPGQGIDALYA
                     PRRTVLDRTLVDAAREADAEVRYGCIVTGLTRDQTGRVHGATIQRADGRHANIEADLV
                     IGADGAASTVARLVDAPVISAGTHASATIYGHWSDLPDTGYRWYYRAGLAAGIIPTNG
                     GQHCVFVAMPQSLYRDHARAGLASLYQRIVTEMAPDLAAAIASSNPESRLWTFPGRNG
                     FLRQATGPGWALVGDAGYFKDPLTAHGITDALRDAELLATAAAAGTNAAMACYGAVRD
                     DLSGTLFGVTDAIASFAWDLDTVQSLHVTLNQAMQREVAYLAALPDRLPVARRNTGAA
                     IRRSTRQIEEIVT"
     gene            1381..1857
                     /locus_tag="VHX39_30095"
     CDS             1381..1857
                     /locus_tag="VHX39_30095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX3995445.1"
                     /translation="MTDTTNRAQTAWDKTVNGRPMVGSTATRTRRTSMADIVAFSNMT
                     GDRNPLHYDAELAADTPFGGLIVQGGVTSGLLNAIVAEDLPGPGTVFLGVEWRFVKAV
                     AVGEDIIGCVKITSVREDKPICHLDTTVHNASGDLCLSGTALTFTVPLRRNAAETG"
     gene            complement(2007..2801)
                     /locus_tag="VHX39_30100"
     CDS             complement(2007..2801)
                     /locus_tag="VHX39_30100"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3995446.1"
                     /translation="MSRIFITGSSDGLGLLSARLLVDQGHQVTLHARNEARAADVRHA
                     LPQVEAVVVGDVSLIAEMRSVAEQVNVLGRYDAMIHNVGVGYRESRHETGDGLARFFA
                     VNVLAPYLLTALITPPDRLVYLSSGMHNGGSADLSDPQWKARRWNGSQAYSDSKLFDA
                     VLAFAVARRWPNVLSNAVEPGWVATKMGGAGAPDDLRLGAVTQAWLAVSDDSAAKVTG
                     QYFYHQKLRRVQQAARRPEVQGELLAYCESLTGVALPGGPIQSEPV"
     gene            complement(2812..4209)
                     /gene="gltX"
                     /locus_tag="VHX39_30105"
     CDS             complement(2812..4209)
                     /gene="gltX"
                     /locus_tag="VHX39_30105"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEX3995447.1"
                     /translation="MTVRTRFAPSPTGLLHIGSARTALFNYLFARHHGGAFLLRIEDT
                     DRERSTEAATQVILEGLDWLGLTRDEQTVFQSTRAARHAEVAHKLLAQGRAYYCYCTA
                     EELRQMREQAVAEGRSPRYDGRWRDRDPKDAPAGIKPSIRLKAPRDGDTVVEDLVQGT
                     VRVANAEMDDLIILRSDGTPTYLHAVVVDDHDMAITHVIRGDDHLTNTFRQVQIYQAL
                     DWAQPAFAHIPLIHGADGAKLSKRHGAVSVLEFREQGFLPEAVCNYLLRLGWSHGDLE
                     VVDRDEAVRLFDIHDVNRGASRMDYAKLTHLNGIYIRKADDDRLAHEVLHRLAHRPEL
                     SLGSIAAGRIRALLPQLKERAKTLVELADSAAFLARVVPLPMEPKAAGQLTAEARLLL
                     RDVGHALAATDFSTPALDAALREFAERTGRKLGQVAQPLRAALTGSTVSPGIDATLAA
                     LGRDEALARIAAAST"
BASE COUNT          830 a         1460 c         1574 g          837 t
ORIGIN      
        1 ggcgtgacgt catggcctgg cctttacgtg cttgggctgc ggttcatgcg acgccggcgc
       61 tcgaacttca ttgatggcgt cggacgggat gccgaagaac tggctgacca cgcgtccgct
      121 cacctttcac gtccgtgcag cgaagctgcg tagtaggatc gaaacgatgt tcaaccacac
      181 aagttacgac gtgctgattg tcggcgcccg gtgcgccggc gcggcaaccg caatgctgtt
      241 ggcgcgcagc ggcctgcgcg tgctggcagt cgatcatgga tcctacgcca cggatacgct
      301 gtccacgcac gctttgatgc gcggtggcgt aatgcaattg caccggtggg gcgtattgcc
      361 gcgcattgtc gcggccggca cgccgccgat ccgccgcacc gcgttccact acggcgacgc
      421 cgtcaccgag atcacgctta agcctgggca ggggatcgac gcactctatg ccccaaggcg
      481 aacggttctc gatcgcaccc ttgtcgacgc cgcccgggaa gcggatgccg aggtgcgcta
      541 cggttgcatc gttacgggtc tgacgcgaga tcaaaccggc cgggtgcatg gcgcaacgat
      601 tcagcgggcc gacgggcggc acgccaacat cgaggcggac ctcgtcatcg gcgccgacgg
      661 tgccgcttcg acggttgccc ggctggtcga tgcaccggtc ataagcgccg gaacccatgc
      721 cagcgccacg atctacgggc attggtcgga cctgccggac accggctacc gttggtatta
      781 ccgtgccggc ctggcggcgg gcatcattcc gaccaatggg ggccagcact gcgtcttcgt
      841 cgcaatgccg caaagccttt accgcgacca tgcgcgcgcc ggactggcct cgctgtatca
      901 gcggatcgtg accgagatgg cgccggatct tgccgccgcc atcgcgtctt ccaatccgga
      961 atccaggctc tggacgtttc ctggccgaaa cggctttctc aggcaggcca ccggtcccgg
     1021 ctgggctttg gtcggtgacg cagggtactt caaggatccg ctgaccgctc atggcatcac
     1081 ggacgcattg cgcgacgccg aattgctggc gacagcggcg gcagccggaa ccaacgcggc
     1141 gatggcttgc tacggcgccg ttcgtgatga cctgtccggc accctgttcg gcgtgaccga
     1201 cgcgattgcc tcgttcgcct gggacctcga tacggtgcag tcgcttcacg tcacgttgaa
     1261 ccaggcgatg caacgcgagg tcgcgtatct ggcagcattg cctgaccgtc taccggtcgc
     1321 ccgcagaaat accggcgcag ccatcaggcg ttccaccagg cagatcgagg agatcgtgac
     1381 atgacagaca caactaaccg cgcgcagaca gcgtgggata agacggttaa cggccgccca
     1441 atggtcggca gtaccgccac gcgtacgcgc cggacgagta tggcggatat cgttgcgttt
     1501 tcgaatatga cgggtgaccg gaacccattg cactacgatg cggaactcgc tgccgacacg
     1561 ccatttggtg gattgatcgt gcagggcggt gtgacatccg gtctgctgaa tgcaatcgtt
     1621 gcggaagacc tgccgggacc gggaaccgtg ttcctcgggg tggagtggcg tttcgtgaag
     1681 gcggtcgcag tcggtgagga tatcattggt tgcgtcaaaa taacatctgt ccgcgaggac
     1741 aaaccaatct gccacctcga cacaacggtt cacaatgcgt cgggtgatct ctgtctgtcc
     1801 ggcaccgcac tgacctttac ggttccgctc cgacgaaacg cggcggaaac gggctgagcc
     1861 gaactggaga tcgtgacggt tttccttcga ttccgcaccg tccgggctgc tcggcggctc
     1921 gaaaggttcc gcagcgacgc ggcgatccag atcactgaag ctggacccga cgcaggtcag
     1981 acgatttgag cgggcggtgc tcgttgtcag accggctcgg actgtatcgg gccaccgggc
     2041 agcgcgacgc cggtgagact ctcgcagtag gcaagaagtt cgccctgcac ctccggccgg
     2101 cgggccgcct gctgcacacg tcgcagcttc tgatggtaga aatactggcc tgtcaccttc
     2161 gcggcgctgt catcgctgac cgccagccac gcctgcgtga ccgcgcccaa tctcaggtca
     2221 tcaggcgccc cggcgccgcc catttttgtt gccacccagc ccggttctac cgcgttcgac
     2281 agcacgttcg gccaccgccg agcgaccgca aaggccaaca ccgcatcgaa cagtttgctg
     2341 tcggaatagg cctgagaccc attccagcgc cgcgccttcc actgcgggtc gctcaggtcg
     2401 gcgctgccgc cgttgtgcat gcccgagctg agatatacca gccggtcagg tggcgtgatc
     2461 aaagccgtca gcaagtacgg cgcgagaacg ttgacggcaa agaagcgcgc gagaccatcg
     2521 ccggtctcgt gacgtgactc gcgatacccg acgccgacgt tgtggatcat ggcgtcgtac
     2581 cggcccagta cattcacttg ttccgcgacc gaacgcatct cggcgatcag cgagacgtca
     2641 ccgaccacga ccgcctcgac ctgcggcaag gcgtggcgca cgtcggcggc acgggcttcg
     2701 ttgcgcgcgt ggagcgtcac ctggtgcccc tgatcgacca gcagccgcgc agagagcagg
     2761 ccgagaccgt cggacgaacc agtgatgaaa atgcgagaca tctggatctc ctcaggttga
     2821 tgcggcggcg atccgggcca gcgcctcgtc acggcccagt gcggccaggg tggcatcgat
     2881 gcctggactg accgtcgacc cggtcagggc cgctcgcaac ggctgcgcca cctggccaag
     2941 cttgcgtccc gtccgctcgg cgaattctcg gagtgcggcg tccagggcag gcgttgaaaa
     3001 gtcggtcgcg gccagcgcat gcccgacgtc gcgtagcagc aaccgagcct ccgccgtcaa
     3061 ctggccggcc gcttttggct ccatcggcag cggcaccaca cgcgccagga atgcagcgga
     3121 atcagcgagt tctacgagag tcttggcgcg ttccttcagc tgcggcagca gcgcccgaat
     3181 gcggcccgcg gcaatcgaac ccagggaaag ctcgggacga tgggcgaggc gatgcagcac
     3241 ctcatgtgcc agccggtcgt cgtccgcctt gcggatataa ataccgttca ggtgggtcag
     3301 cttcgcgtaa tccatccgcg aggcgccgcg gttgacatcg tggatgtcga acagccggac
     3361 cgcctcgtcg cggtcgacga cttccagatc gccgtgcgac cagcccagtc gaagcaggta
     3421 gttgcagacg gcttcgggga ggaagccttg ctcgcggaat tccaacacgg aaacggcgcc
     3481 gtgacgcttg gacagtttgg cgccgtcggc gccgtggatc agcgggatgt gggcgaacgc
     3541 cggctgcgcc cagtcgaggg cctgatagat ttgcacctgg cgaaaggtgt tggtcagatg
     3601 atcgtcgccg cgaatgacgt gagtgatcgc catgtcatgg tcatcgacca cgacagcgtg
     3661 cagataggtg ggagtgccgt cgctgcgcag aatgatcagg tcgtccatct cggcattggc
     3721 gacacggacg gtgccttgca cgaggtcctc gacgacggtg tcgccatcgc gcggggcttt
     3781 cagccggatc gagggtttga tgcccgccgg cgcatccttc ggatcgcggt cgcgccaacg
     3841 accgtcgtag cgcggcgacc ggccctcggc gaccgcctgc tcccgcattt gccgcagttc
     3901 ttccgccgtg cagtaacagt aatacgcgcg gccctgggcc agcagtttat gcgcgacctc
     3961 ggcgtggcgg gcggcacggg tggactggaa tacggtctgc tcgtcgcggg tcaggccaag
     4021 ccaatcgaga ccttcgagaa tgacctgcgt tgcggcctcg gtgctgcgtt cgcggtcggt
     4081 gtcctcgatg cgcagcagga aggcgccgcc gtggtggcgg gcaaacaggt agttgaacag
     4141 agcggtccgg gcgctgccga tatgcagcaa cccggtggga ctgggcgcga agcgcgtgcg
     4201 gacggtcatg cgggtggggt ccaagaggga agggaacttc cgatggtggg ggatatagag
     4261 catttcccgg gcagcggaat ggcggcggtg caaggcgggg ttgtgcagat ggtagttggc
     4321 gcggtttggc gtgaggctgg ggtggcggcg aaatccaggt gtgccggtta acctgatgtt
     4381 gaggcgcggc ccgttagcct catgtcatgg gaccgacccg cgcgctcatg atcctgctac
     4441 cgaagagtag actggaggtg gggctggaga acccgatctg cgccggccag cctgggaccg
     4501 tgcggaacgt ggcggtcgtg tgcttcagcg tttgcttcgc gcgccttgac ccggtagcgt
     4561 cgggtccggg aacgggaagt gtccggttgt gaagggcttc atctcctaca cacatagcga
     4621 ttacaaacta tgcaaggagt tggaagcgca tcttgccctt agcaaggatc acggcggcgc
     4681 ggacttttgg gcggacaaca g
//
LOCUS       DATAVD010001569         1624 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2196358, whole genome shotgun sequence.
ACCESSION   DATAVD010001569 DATAVD010000000
VERSION     DATAVD010001569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2196358"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            190..1314
                     /locus_tag="VHX39_30110"
     CDS             190..1314
                     /locus_tag="VHX39_30110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DSD1 family PLP-dependent enzyme"
                     /protein_id="HEX3995448.1"
                     /translation="MLQTPPAIPGMREEDIDTPALVIDLDAFEYNLDHMAALLAPTGV
                     KLRAHAKTHKSPVIAKLQMARGAVGQCVQKVAEAEVLAWGGIPDILVSNQVVGAAKLA
                     RLCALSAIAKTAVCIDDAAQLEWIERAAADSGRRMTVLVEIDVGAARCGVPPGPAAVE
                     LAKRIAASKHLIFGGLQAYQGSAQHKRTVAERQTLIGSAVDASRRTVEQLRQQGLDCP
                     IVGGAGTGTFQIESTSGIYTEMQCGSYVFMDADYARNLDADGNPVSTFRHALFVLATV
                     MSAPHTGLAVLDAGHKAVPIDSGMPTVWQKPDIRYVSASDEHGKLLVASETTMPKLGE
                     KLRLVPGHCDPTVDRYDWYVGVRGGRVESLWPVAARGAMA"
     gene            complement(1319..>1624)
                     /locus_tag="VHX39_30115"
     CDS             complement(1319..>1624)
                     /locus_tag="VHX39_30115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995449.1"
                     /translation="CRPVLDGMFGPKLDVILTPSSKGEAPEGLHTTGDAVFNKMWTLM
                     HGPNVGIPVCFGPTGLPVGVTLVGPQMADQRLLAIASACAPVIDTEPEARQRRLWPD"
BASE COUNT          332 a          503 c          504 g          285 t
ORIGIN      
        1 gtaggcacgt cggagcatca aatcttctct gtgcctctta atttgaaatg ggaagtcgaa
       61 caaagtactc cgcccgacat gaaggcatcg cagccggatc gctcaccata cgtcgcagca
      121 gcgcatgccc caattgtcga agtcccatcc cgggcctaaa ccatcgccag accaggatgg
      181 gatgagacga tgctgcagac accccccgcc attcccggca tgcgcgaaga agacatcgat
      241 acgcccgctc tggtgatcga tctcgacgcg ttcgaataca atcttgacca tatggcggcg
      301 ctgttggccc cgaccggcgt gaagctgcgc gcgcatgcca agacgcacaa atccccggtt
      361 attgccaaac tgcaaatggc gcgtggtgca gtgggtcaat gcgtgcagaa agtcgccgag
      421 gccgaggtgc tggcctgggg cggcatcccc gacattctgg tcagcaacca ggttgtcggt
      481 gccgccaaac tggcccggtt atgcgcattg tcagcaatcg ccaaaaccgc tgtgtgtatc
      541 gatgatgcag cccagttgga gtggatcgaa agagcggcag cggattcggg acggcggatg
      601 acggtgttgg tggaaatcga cgttggcgcc gcacggtgcg gcgttccgcc cggtcccgcc
      661 gcggtcgaac tggcgaaacg catcgccgcg tcaaaacatc tgattttcgg tggtttgcag
      721 gcctatcagg gcagtgcgca acacaaacgc acggtggccg aacggcagac cctgatcggc
      781 agtgcggtgg atgcctcccg ccgcacagtg gagcaattgc gccaacaagg tctcgattgt
      841 ccgatcgtgg gcggcgccgg aaccggcacg ttccagatcg agtcgacgtc cggcatctac
      901 acggaaatgc aatgcggcag ctacgttttc atggatgccg actacgcgcg gaacctggac
      961 gcggacggca acccggtcag cacattccgt catgcgctgt tcgtgctggc aacggtcatg
     1021 agcgcgccgc acaccggtct cgccgtgctg gacgccggcc acaaagcggt gccaattgat
     1081 tccggcatgc caaccgtttg gcaaaagccg gatattcgct acgtcagcgc gtccgacgag
     1141 cacggcaagc tgcttgtcgc cagcgagacc acgatgccca aactgggcga aaaattacgc
     1201 ctggtgccgg gccattgcga cccgacggtg gatcgttacg actggtatgt cggcgtacgc
     1261 ggcggccggg tggaaagcct gtggccggtg gccgcgcgag gcgcgatggc ctgacgcatc
     1321 agtcaggcca aagccgccgt tgccttgctt ccggttcggt atcgatcacc ggagcgcagg
     1381 ccgatgcgat cgccaacagc cgctgatcgg ccatttgcgg gccgaccaac gtcacgccga
     1441 ccggcaaacc tgtgggaccg aaacaaaccg ggatgccaac gttgggacca tgcatcaagg
     1501 tccacatttt gttgaacacg gcatccccgg tggtatgcag gccttccggc gcctcgccct
     1561 tcgaactcgg tgtcaggatc acgtccagtt tcgggccgaa catgccgtcc agcaccggcc
     1621 ggca
//
LOCUS       DATAVD010001570         3714 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3687405, whole genome shotgun sequence.
ACCESSION   DATAVD010001570 DATAVD010000000
VERSION     DATAVD010001570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3714
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3687405"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..1020)
                     /locus_tag="VHX39_30120"
     CDS             complement(139..1020)
                     /locus_tag="VHX39_30120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3995450.1"
                     /translation="MVPRSQIPGVYHRRIGDIVVTALSDGYLDGAVEVMQNITPPDAT
                     QLLTDAFRPGRRTSVNCYLVYSAGRLALIETGSGDYLLPTAGKLQQNLKAAGVNPADI
                     ESVILTHMHPDHSAGLADPKTGEKFFPNAELVVHENEPRHWNDDGAMSRADERARKMY
                     FQCAREQMAPYHNQMRTFAGAVEVFPGVTSMPLHGHTPGHSGYMIESGDQSLLIWGDI
                     IHVPEVQVPRPEVTMVFDTDPHQAAATRTRTFDMVATDRQLIAGMHVHFPGFAHLVKS
                     GDGYLMLPEPWDQAFGG"
     gene            complement(1034..1777)
                     /locus_tag="VHX39_30125"
     CDS             complement(1034..1777)
                     /locus_tag="VHX39_30125"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012226604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX3995451.1"
                     /translation="MRLKDKVAIVTGGAHGMGEAEARLFAKEGAAVVIADMLTKEGEA
                     VAADIAASQGRARFVRTDVTSESDWQKLIAETITAYGRLDILVNNAGISGSSVGDVDG
                     LEGWNRLLSVNGSSVFLGTKHAATAMIPNGRGSIVNISSIMGFVGSADSHPGYAASKG
                     AVRLYTKAAAAKYGPSGIRVNSVHPGYMPPMLNATNAAGRASKIEATPLRRLGEPIEV
                     AYGVLFLASDEASFVTGTELVIDGGYIAQ"
     gene            1993..2160
                     /locus_tag="VHX39_30130"
     CDS             1993..2160
                     /locus_tag="VHX39_30130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995452.1"
                     /translation="MKTMILAAFAALTLTAAIAPMANAASFGRPTATYHSGPYDNTAN
                     SLGGRYVGGGD"
     gene            complement(2223..2573)
                     /locus_tag="VHX39_30135"
     CDS             complement(2223..2573)
                     /locus_tag="VHX39_30135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995453.1"
                     /translation="MRIHNIYVDDAGETHWRDVEVQWVEERNGSKLSARLPANGIIFR
                     ETGGDYDLSWHPAPRRQYIINLDGGVKITASDGEAREIGAGEVILVEDVRGKGHLSQS
                     IGGKMRHSIFVPIE"
     gene            complement(2587..2943)
                     /locus_tag="VHX39_30140"
     CDS             complement(2587..2943)
                     /locus_tag="VHX39_30140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995454.1"
                     /translation="MGIRVHNLYCDAQGESHWRDVQIEWAQEGPEGKTSTRLPAMGII
                     FRQTQAEHDRPWHPAPRRQYIINLDAGVELTASDGESRVIGAGEVVLVEDISGRGHLS
                     KSVNNQMRHSIFVPIE"
     gene            complement(2943..>3714)
                     /locus_tag="VHX39_30145"
     CDS             complement(2943..>3714)
                     /locus_tag="VHX39_30145"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3995455.1"
                     /translation="KGYTIGDNTHKESSHYPWRLDDEKLMYPAYERFQRSGIKNVCIH
                     KGLFPPSAEKAFPNLRSHVDVSDVGKAAKDWPGLNFVIYHSAYRHVGGSPVEAMAEWD
                     QTGRSSWVSDLADIPGKYGVTNVYGDLGQLFAYTSVAEPRLAAALMGTLVKGLGTDHV
                     IWGTDAVWTGAPQWQIEGLRRLEIPEDMQKKHGFAPLGAADGPVKRGIFAQNGFRLFG
                     YDRHAELAKPDRFGMLKEEYLRDGADPSNLRYGYVRRA"
BASE COUNT          700 a         1304 c         1018 g          692 t
ORIGIN      
        1 cgaaatgtcc gcacaggaac agcgccccgg cccgccggcc tcggctggcg ccgatcccca
       61 gcaacgccag gaatgcgggg cccggcgcca gagtataggc ggcgccggac aaagccgagg
      121 caagcagcag cccgaaactc accccccgaa cgcctggtcc cacggctccg gcagcatcag
      181 gtacccatcc ccggacttca ccagatgcgc gaaccccgga aaatgcacgt gcatcccggc
      241 aatcaactgc cggtcggtcg ccaccatgtc gaacgtccgc gtgcgcgtcg ccgccgcctg
      301 atgcggatcg gtatcaaaca ccatcgtgac ctcaggccga ggcacctgca cctccggcac
      361 atggatgata tcaccccaga tcagcaacga ttggtcgccc gattcgatca tgtaaccgga
      421 atgacccggc gtatgcccat gcagcggcat cgacgtcacg cccggaaaca cctccaccgc
      481 acctgcaaat gtccgcatct ggttatgata cggcgccatc tgttcgcgcg cgcactgaaa
      541 atacatcttc cttgcccgct catcggcgcg ggacatcgcg ccgtcgtcgt tccagtgccg
      601 aggctcgttc tcatgcacca ccagttcggc gttggggaag aacttctccc cggtcttcgg
      661 gtccgccagc ccggcggaat gatccggatg catgtgcgtc aggatcaccg attcaatatc
      721 cgccggattg acgcccgccg ccttcaggtt ctgctgcaac ttgcccgccg tcggcagcag
      781 ataatcgccc gatcccgtct cgatcaacgc caaccgcccc gccgaataca ccaggtagca
      841 gttgaccgac gtccgccgcc caggacgaaa cgcatccgta agcaactgcg tcgcgtcagg
      901 cggcgtgatg ttttgcatca cctccaccgc gccatccaaa tagccgtcgg acagcgcggt
      961 aacgacgatg tctccgatcc gccggtgata gacgcccggg atctgtgaac gcggaaccat
     1021 gtgcgaactc ctgctattgc gcgatatagc cgccgtcgat aaccaactcc gttccggtaa
     1081 cgaacgaagc ctcgtcggag gcaaggaaca gcacgccgta cgccacttcg atcggttcgc
     1141 caagccggcg cagcggcgtg gcctcgatct ttgaggcccg gcccgctgcg ttcgttgcgt
     1201 tcagcatcgg cggcatatag cccggatgca ccgagttcac ccgaatcccc gaaggtccat
     1261 atttcgccgc cgccgccttg gtatacagcc gcacagcgcc cttcgacgcc gcataccccg
     1321 gatggctatc ggcgctaccg acgaacccca tgatcgagga aatattcacg atcgagcccc
     1381 gcccgttcgg aatcatcgcc gtcgcggcgt gtttggtgcc caggaacacg ctggaaccgt
     1441 tgaccgacag caaccggttc cagccctcca gcccatccac gtcacccacc gaactgccgc
     1501 tgatcccggc attgttgacc aggatatcga gccggccata agcggtgatc gtctccgcga
     1561 tcaacttctg ccaatcgctt tccgacgtga catccgtcct gacgaatcgc gctcggcctt
     1621 ggctggccgc gatatccgcg gcaactgcct cgccttcctt ggtgagcatg tcggcgataa
     1681 cgaccgcggc gccctccttg gcgaacaacc gagcctccgc ctcacccatg ccatgcgcac
     1741 cgccggtgac gatcgcgacc ttgtctttca gacgcattgt ttttcctcct cgatgacaga
     1801 cttggcgccg cgagataccg aagcaggtct ccccgccggc gtccaccaca cggcttcaca
     1861 aggttcggac tatttccgcg ccgcacgcat aaatccaata agcaaaacct cgattatcat
     1921 ccccagcgcg cgagactatt tcaggctcca tcgaagccgg acacatcgcc cgacgaaaga
     1981 tggagaattc cgatgaagac catgatcctt gccgcctttg ccgccctgac gctgaccgca
     2041 gcgatcgccc cgatggccaa cgccgcttcg ttcggccggc cgaccgccac ctaccattcg
     2101 gggccgtatg acaataccgc caacagcctc ggtggccggt atgttggcgg cggcgactaa
     2161 tcccgcctaa cgcaacacca tcaaggccgg ggggaagttc cccggccctt ttgcgctgcc
     2221 gtctactcga taggcacgaa gatcgaatgc cgcattttcc cgccgatcga ctgcgacaaa
     2281 tgtcccttgc cacgcacgtc ctcgaccagg atcacctcac ccgcaccaat ctcgcgcgcc
     2341 tcgccgtcgc ttgcggtgat cttcacgccg ccgtccaggt tgatgatgta ttgccggcgc
     2401 ggcgcaggat gccagctcag atcgtagtcc ccgcccgtct cgcggaagat gattccgttg
     2461 gccggcaaac gcgcggacag cttgctgccg ttgcgctcct cgacccattg cacctcgaca
     2521 tcccgccagt gggtttcgcc ggcgtcgtcg acatagatat tgtgaatgcg cattggttta
     2581 tctcctctat tcgatcggca cgaagatcga gtgccgcatc tgattgttga cggatttcga
     2641 cagatggccg cggccgctta tgtcttccac gagcacaact tcgcccgcgc cgatgacgcg
     2701 ggattcgccg tcactggccg tcagttccac gccggcatca agattgatga tgtattgccg
     2761 ccgcggcgcc ggatgccagg ggcggtcatg ctccgcctgg gtctgccgga agatgatgcc
     2821 catggccggc aaacgcgtgg acgtcttgcc ctccggccct tcctgagccc attcgatctg
     2881 cacgtcgcgc cagtgggatt caccctgcgc atcgcaatac aggttgtgga cgcggatgcc
     2941 catcatgccc tccgcacgta gccgtaacgc aggttgctgg gatcggcgcc gtcgcgcaga
     3001 tactcttcct tcagcatccc gaaacgatcc ggcttggcga gttcggcgtg ccggtcgtaa
     3061 ccgaacagcc ggaaaccgtt ttgggcgaaa atcccccgct tgaccggacc gtcggcggca
     3121 cccagcggcg cgaagccgtg cttcttctgc atgtcctcgg ggatttccag ccggcgcagc
     3181 ccctcgatct gccattgcgg cgcgcccgtc cagaccgcat cggtgcccca gatcacgtga
     3241 tcggtgccca gacccttgac cagcgtcccc atcagcgccg ctgccaaccg cggttcggcc
     3301 acgctggtat aggcaaacaa ctgccccaga tcgccataga cattggtcac gccgtatttt
     3361 cccggaatgt cggcaagatc gctgacccag gaactgcggc cggtctgatc ccattccgcc
     3421 atagcctcga caggcgagcc gccaacgtgc cggtacgccg agtgatagat gacgaaattc
     3481 agccccggcc aatccttcgc cgccttgccg acatcgctga catcgacatg gctgcgcagg
     3541 ttcgggaagg ccttttcggc cgacggcgga aacagcccct tgtggatgca gacgttcttg
     3601 atgcccgatc gctgaaaccg ttcgtaggcc gggtacatca gtttctcgtc atccagacgc
     3661 cacgggtaat ggctggattc cttatgggtg ttgtcgccga tcgtgtaacc tttc
//
LOCUS       DATAVD010001571         6838 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3687580, whole genome shotgun sequence.
ACCESSION   DATAVD010001571 DATAVD010000000
VERSION     DATAVD010001571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6838
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3687580"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..506)
                     /locus_tag="VHX39_30150"
     CDS             complement(<1..506)
                     /locus_tag="VHX39_30150"
                     /EC_number="1.-.-.-"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF013412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX3995456.1"
                     /translation="MSQMFSRIESALQEFIERQRIFFTGSATADSRVNVSPKGSDSLR
                     VIGPNAVAYLDQTGSGNEAAAHLRKDGRLTIMFCAFEGPPMILRLYGRGRSLPAGGSE
                     YEELLASAFAGEEPPGARQIVLLDVEAVQTSCGYSVPLYEFQEDRQTLKNWASRKGKA
                     GIRDYWRQ"
     gene            complement(523..4083)
                     /locus_tag="VHX39_30155"
     CDS             complement(523..4083)
                     /locus_tag="VHX39_30155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3995457.1"
                     /translation="MHFDLKLWRLTAGLRGRIIWSVFLGLAALCVGITRFVFLGRFLA
                     GVFRGDPWLALAPWLLATAGAILLRSALDHTRTMVAYKTATRVQEVLRARLFDKIIAL
                     GPAWFGAERTGGVMLSMVDGVEQLQTFFGQYLPQVTIALCAPIAIFCFIAYWDLPVAA
                     VMLGAALFTLFLPATVHRQTSRASKGRHDAFKSFGEEFLDAVQGLPTLKAFGQSKAYG
                     KMLGDKAHALSDATFWVLALNVMTRGFTDLGTAVGAAAGMALGAWRVEQGAMSLTALL
                     IVLMAGTEIFRPLRDLRTVLHSGLNGQSAANGINALLDTPVTAPTAPAHPQPIAGIRP
                     EIEFDTVGFAYPGGRRPAHTGLSFIIAAGERVGVVGPSGSGKSSIVRLLLRLFDPQSG
                     VIRIGGHDLRAFDPDAVRSMIAVVSQDTWLFHGSVEENLRLGRPDATEAELVAAARAA
                     NAHDFIMGLPDGYQTAIGERGSQLSGGQRQRLAIARALLRDAPILVLDEALSSVDAEN
                     EAVIQQALDRLMTGRTTLILAHRLSSVIGADRILVLEDGAVVQSGSHAVLIAQEGPYR
                     QLMGPQVAEATDSELVLLEPAVRQAETDIATSATVTSIADDAAAVGWPATIRTLLSFV
                     RPYRGQLGIVMVCGILRVVAFIGVGVFGALLLGAVRNHTPIEGLIIGLLLTAPLAGVL
                     HWLESWIAHAMAYALLAEMRIRLFRKLDALAPAYLLRRRSGDLVALATQDVETVEYFF
                     AHTIAPAIVAFLVPAAVLLALLVIAWPLALALAPFLIYAAASPMRGRQRIDTLGSAAR
                     GALGGLGAYVSETIQGMSELVAFNAAGRRRDGFMAAVRQYQATRLRLLADLSFQTSAL
                     EVATGLGGLAVGGVGAVLVHAGWFSPVLLPLFVLISISAFLPVSEIAQVGRQLADTIA
                     STRRLHVVHAEPEVIRDGSIVPEPRAGGSSLRFEHVTFTYPGRNRRALSDVSFEISAG
                     ATVALVGPSGAGKTTIANLLLRFWDPQSGRILLDGVSPPDLTLDGLRGRVALVAQDTY
                     LFNNTLEANVRLARPDATQEQVSLALSRAALAEFVAGLPEGLATKVGERGVQLSGGQR
                     QRIAIARAFLKDAPLLVLDEATSHLDTISEQAVRSALGQLMVDRTTIVVAHRLSTIRA
                     ADLILVLEAGRLVESGTHAALMARGGVYARLVDHQLAAVA"
     gene            4488..5540
                     /locus_tag="VHX39_30160"
     CDS             4488..5540
                     /locus_tag="VHX39_30160"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3995458.1"
                     /translation="MTVIDCDIHPGVPDIKVLLPYMSDFWSTSFVDRGIDGFDMMSYP
                     LGAPITCRPDWRVSGQRPGASLDAMRAQALDRFGIGLAICNPLTGGQVAASESMGAAI
                     CSAANDWIIDKWLKREPRLRASIVVPAQAPLLAVEEIERLAGDHRFVQILLPAACEML
                     LGRSYYWPIYEAAARHGLPVGIHAGSMYRYAPTSGGWPSHYLHDYVANSQLFEDQLLS
                     LISNGVFVKFPALKFVFIESGVSWLPAFLWRAVKTWRGVRPEVPWVNRSPADIIRSNI
                     RLTTQPFDAPDQETVERIVEQLDCDDMLLFASDYPHWQFEGDAVTPPGLSGALLQRVQ
                     VDNPLATYPRLKETLS"
     gene            5554..6657
                     /locus_tag="VHX39_30165"
     CDS             5554..6657
                     /locus_tag="VHX39_30165"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3995459.1"
                     /translation="MNAPVDVAQHREDADTSYGIIDCDVHPYPKAGALNKYLSERWRK
                     HVAEYGQMTTGIYAARGTYPRFSPNTSRRDSWPPNGGAPGSDVDFIRQQLLDPYNITY
                     GVLEPLLGGNTSRNLDEAAALCSAMNDWQAQEFVDPEPRLRASILVPAEDPPAAVREI
                     ERRAGDWRFCQIQLGSKTAEPLGRRRYWPIFEAALQHGFSIGLHIGGTMTSAPSPSGW
                     PQFYIEDHQMLTHSMMNQAVSLILEGVFDRYPDLKIVMIEGGFGWVPQLGWRLDAHWS
                     KMRSEVPDLQRKPSEYLKSNLWYATQPVEEPEHPDDLRKLFDWIGWDRMLYSSDYPHW
                     DFDDPHLAWRFQMTEVEKRNLLHDNALAVYSFK"
BASE COUNT         1323 a         2222 c         2106 g         1187 t
ORIGIN      
        1 ttctgccgcc aatagtccct gatcccggct ttgcctttcc gagaagccca gttcttcagg
       61 gtttgacgat cttcctggaa ttcgtaaagc ggcacggaat atccgcacga ggtctgcacc
      121 gcctcgacat ccagcaacac gatctgccgc gcgcccggcg gttcctcgcc ggcgaacgca
      181 ctggccagca gttcctcgta ttcggaacca ccggccggca acgaccggcc gcgaccatac
      241 agccgcagga tcatcggcgg accctcgaac gcgcaaaaca tgatggtcag ccgcccatcc
      301 ttccgcaaat gcgccgctgc ttcgttgccg ctgccggtct ggtccagata ggccaccgca
      361 ttcgggccaa tcacccgcag actgtccgag cccttgggcg acacattgac ccgcgagtca
      421 gccgtggccg agccggtgaa gaaaatccgc tgccgctcga tgaattcttg caacgccgat
      481 tcgatccggg aaaacatctg tgacatctta gtgctccgct atttacgcca ctgccgccag
      541 ctgatggtct accagcctgg cgtacacccc accgcgcgcc atcagcgccg catgggtccc
      601 ggattcgacc agccggccag cctccagcac caggatcagg tccgccgccc ggatcgtcga
      661 cagccggtgt gccacgacga tcgtggtccg atccaccatc aactgcccga gagccgaccg
      721 caccgcctgc tcactgatcg tatcgagatg cgaggtcgct tcatccagca ccagcaacgg
      781 tgcgtccttc aggaaggcgc gagcgatggc gatgcgttgc cgctggccgc cggacagttg
      841 cacgccacgc tcgcccactt tggtcgccag cccctccggc agaccggcca cgaactcggc
      901 cagcgcggcg cgcgataatg ccagcgaaac ctgttcctgc gtcgcatcgg gccgcgccag
      961 gcggacattg gcttcaagcg tgttgttgaa caggtaggtg tcctgcgcca ccaaggcgac
     1021 ccgcccgcgc agcccatcca atgtcaggtc gggtggcgat accccatcca acaggatgcg
     1081 gccgctttgc ggatcccaga accgcagcaa cagattggca atcgtagtct tgcctgcgcc
     1141 ggagggcccg accagagcaa ccgtcgcccc cgccgatatt tcgaacgaca catccgacag
     1201 cgcccgccga ttgcgacccg gataggtgaa cgtcacatgc tcgaaccgga gcgaagaccc
     1261 gcccgcccga ggctcgggaa cgatgctgcc gtcgcggatc acttccggct cggcgtgcac
     1321 cacatgcaac cttcgcgtcg aagcaatcgt atccgccaat tgccgcccca cctgggcaat
     1381 ttcggaaacc ggcaggaacg ccgagatcga gatcagcacg aacaacggca acaaaaccgg
     1441 cgagaaccag ccggcatgca ccagcaccgc cccgacaccg ccaaccgcga gaccgcccag
     1501 tccggtggcg acctcaaggg cgctggtctg gaaactgaga tcggcgagca accgaagccg
     1561 ggtcgcctga tattgccgca ccgccgccat gaacccatcg cggcgccggc cggcagcgtt
     1621 gaacgccacc aactcactca tgccctggat ggtctccgac acgtaggcgc caagtccgcc
     1681 caatgcgcct cgggcagcgg agccaagcgt atcgatgcgc tgccgcccac gcattgggga
     1741 cgctgcggcg tagatcagga agggtgccaa ggccagagcc aacggccagg caatcaccag
     1801 caatgcaagc agcaccgccg ccggcaccag gaacgcaacg atggcaggcg cgatcgtgtg
     1861 ggcgaagaaa tactcgaccg tctcgacgtc ctgggttgcc aacgcgacca gatcccccga
     1921 tctgcggcgc aacaaatacg ccggcgccag cgcatcgagc tttcggaata accggatccg
     1981 catctccgcc agcagcgcat aggccatcgc gtgcgcaatc caggactcca gccagtgcag
     2041 caccccggcc aacggagcgg tcagcagcag gccgatgatc aggccctcga tcggtgtgtg
     2101 attccgcacg gcgcccagaa gcagtgctcc gaaaacgccg acaccgatga aggcgacgac
     2161 ccgcagaatg ccgcacacca tgacgatgcc gagctgaccg cgataaggcc ggacaaagct
     2221 cagcaaggtt ctgatcgtcg caggccagcc aacggcagcg gcgtcgtctg cgatgctggt
     2281 cactgtcgca ctggtcgcga tatcggtttc cgcctggcgc accgcgggct ccagcaatac
     2341 gagctcggaa tccgtcgctt ccgccacctg cgggcccatc aactgccgat acggtccctc
     2401 ctgggcgatc agcacggcgt gcgagccgga ttgcacgaca gccccgtcct ccagcaccag
     2461 gatgcgatcg gcgccgatca cgctcgacag ccggtgcgcc aggatcagcg tggtccgccc
     2521 ggtcatcagg cgatccagcg cctgttggat caccgcctcg ttttccgcat cgaccgagga
     2581 tagcgcctcg tccagcacca ggatcggcgc atcgcgcagc agcgcccgag cgatcgccag
     2641 ccgctgccgc tgaccgcccg aaagctgcga cccgcgttcg ccgatcgcag tctggtagcc
     2701 gtccggcaac cccatgatga agtcatgcgc attggcggcg cgagcggcag ccaccagttc
     2761 ggcctcggtc gcatccggcc tgccaagccg caggttttct tcgaccgaac catggaacag
     2821 ccaggtgtcc tgcgacacca ctgcaatcat gctgcgtacc gcatcggggt cgaacgcgcg
     2881 caaatcgtgc ccgccgatgc ggatgacgcc ggattgcgga tcaaatagcc gcagcaacag
     2941 ccgcacgatc gatgattttc ccgagccgct cggcccgacg acacccaccc gctcaccggc
     3001 agcgatgatg aaactcaggc cggtatgtgc gggccgccgt ccgccggggt aagcgaagcc
     3061 aacggtgtcg aattcgatct ccggacgaat tcccgcgatt ggctgcggat gcgccggcgc
     3121 ggtcggcgcg gtgaccggcg tatccagcaa tgcattgatg ccgttcgccg cagattggcc
     3181 gttcaggccg gagtgcagca ccgtgcgcag gtcgcgcagt ggccggaaaa tctcggtgcc
     3241 ggccatcagc acgatcagca gggcggtcag cgacatggcg ccttgctcga cccgccacgc
     3301 tcccagggcc atcccggccg ccgcaccaac cgcggtgccg aggtcggtga agcctcgggt
     3361 catgacgttc agtgccagca cccagaacgt tgcatccgac aaagcgtgcg ccttgtcgcc
     3421 gagcattttg ccgtacgcct tgctctgccc aaacgctttc agggttggca ggccctgcac
     3481 ggcgtcaagg aattcctcgc cgaacgactt gaacgcgtca tgccggccct tcgacgcgcg
     3541 gctggtctgg cgatgcaccg tcgcgggcag gaacagggtg aacagcgccg cgcccagcat
     3601 gacggcggcc acgggaaggt cccaataggc aatgaaacag aagatggcga tcggcgcaca
     3661 cagagcaatc gtcacctgcg gcaggtactg accaaagaat gtctgcagtt gctcgacgcc
     3721 gtcgaccatc gacagcatga cgccaccggt tcgttccgcc ccgaaccacg ccggccccag
     3781 agcgatgatt ttgtcgaaga ggcgggcgcg caacacttcc tgcactcggg tggcagtttt
     3841 gtaagcgacc atggtacggg tgtgatcgag cgcggagcgg agcaaaatcg cccccgcggt
     3901 cgccagcagc cacggcgcca gggcgagcca cggatcgccg cggaacaccc cggccaggaa
     3961 gcggccgagg aacacgaacc gagtgatacc gacgcacaat gccgccaggc ccaaaaatac
     4021 cgaccagatg atgcggcccc gcaggccggc ggtgaggcgc cagagcttaa gatcgaagtg
     4081 catttgtcaa ttgtgccgca aatggcgatg cgctggaacc cccgcgccat gaggctggcc
     4141 cggcatggac agttgcggtc gaaacgtgtt gacgaagtat tccgctcagg taatggatgg
     4201 acccgatatg cgggactcgc tcaaatcgtt cttcgttgat gcaaagatcc cggtcatttt
     4261 ggtggtcctc gtgctggggc ttgtagtgtt ggtctatctc gccggccggt acttgcgcac
     4321 accatgagat ccgggaggcg ggagccgcgt gatccggtct ggccgggcct ggagttgcaa
     4381 ttgcgggtgg cgaactcgtc cgtgctattg ggcgagaaat cggctaagct ggccctcgac
     4441 gggggcgcgg cggactggca gcgcacattg aaacaagcgg gactaaaatg acggtcatcg
     4501 actgcgacat ccatccgggt gtgccggata tcaaggtgct gctgccctat atgagcgact
     4561 tctggagcac gtcgtttgtc gatcgcggca ttgacgggtt cgatatgatg agctacccgc
     4621 tcggcgcgcc gatcacctgc cggcccgatt ggcgggtctc cgggcaacgg ccgggcgcca
     4681 gcctggatgc gatgcgcgct caggcgttgg atcggtttgg cattggtctg gcgatctgca
     4741 acccgttgac cggcggccag gtcgcggcca gcgaatcgat gggtgcggca atttgctcgg
     4801 ccgcgaatga ctggatcatc gacaaatggc tgaaacggga accgcggctg cgggcctcga
     4861 tcgtggtgcc ggcacaggcg ccattgctgg cggtggagga aatcgaacgg ctggccggcg
     4921 atcatcgctt cgtgcaaatc ctgctgcccg ccgcctgcga aatgctgctt ggccgcagct
     4981 attactggcc gatctatgaa gccgcggcgc ggcatgggct gccggtcggc attcacgccg
     5041 gcagcatgta tcggtacgcg ccgacgtcgg gtggctggcc ctcgcactat ctgcacgatt
     5101 atgtcgcgaa cagccagttg ttcgaggatc agttgctcag cctgatttcc aatggcgtct
     5161 tcgtaaaatt cccggcgctg aaattcgtgt tcatcgagtc aggagtcagt tggttgccgg
     5221 ccttcctttg gcgcgcggta aagacctggc gaggcgtgcg acccgaggtg ccttgggtga
     5281 accgctcgcc cgccgacatc atccggtcca acatccgcct gaccacccaa ccgttcgacg
     5341 cgccggatca ggaaactgtc gagcgtatcg tcgaacagct cgattgcgac gacatgttac
     5401 tgtttgcgtc tgactatccg cactggcagt ttgagggcga tgcggtgacg ccgcccgggc
     5461 tttcgggcgc tcttttgcaa cgtgtgcagg tggacaatcc gctcgccacc tatcctcgcc
     5521 tcaaggagac tttgtcatga atgcgccctt gtcatgaatg cgccggtcga tgttgcgcag
     5581 caccgcgaag atgccgacac gagctacggc atcatcgatt gcgatgtgca tccctatcca
     5641 aaggcgggtg cgctgaacaa atatctgtcg gagcgctggc gtaagcacgt tgccgaatat
     5701 ggccagatga ccacgggcat ttatgctgcg cgcggcacct atccgcggtt ctcgccgaat
     5761 acgtcgcggc gtgactcctg gccgccgaat ggtggcgcgc cgggctcgga cgtcgatttc
     5821 attcgccagc aattgctcga tccatacaac atcacctacg gcgtcctgga accgcttctt
     5881 ggcggcaata cctcgcggaa tttggatgag gcggcggcgt tgtgctcggc gatgaacgac
     5941 tggcaggcgc aggagttcgt cgatccggag ccgcggttgc gcgcatcgat cctggtgccg
     6001 gcagaagatc ctccggccgc cgttcgcgaa atcgaaaggc gtgccggcga ctggcggttt
     6061 tgccagatcc agcttggctc caagaccgcc gagccactgg gccgccgccg ctactggccg
     6121 atcttcgagg cagcgttgca gcatgggttt tcgattggtc tgcatatcgg cggcacgatg
     6181 acgagtgcgc cgtcaccgag cggctggccg caattctaca tcgaagatca ccagatgctg
     6241 acccattcga tgatgaacca ggcggtcagt ttgatcctcg agggcgtgtt cgatcgttac
     6301 cctgacctga agatcgtcat gatcgagggg ggcttcggtt gggtgccgca actcggctgg
     6361 cggctcgatg cgcattggtc gaagatgcgg agcgaggttc cggatttgca acggaaaccg
     6421 tcggagtacc tgaagtccaa tctgtggtac gcaacgcaac cggtcgaaga acccgaacat
     6481 ccggacgatc ttcgaaaact gttcgactgg atcggctggg atcgcatgct gtattccagc
     6541 gactatccgc actgggactt cgacgatccg catttggcat ggcggttcca gatgactgag
     6601 gtggaaaaac gcaatctgct gcacgacaac gcgctggcgg tgtactcgtt caaataggat
     6661 cggttgctcc ggatcacggc ccgtgccgct tctgccgccg gatttaattc aagaggaacg
     6721 gaggtacaga gcaaccgagg cctccggcgg attgggttgc tttgcgtcca tgccgacgtg
     6781 atcgcgtagg cacgtcggag catcaaatct tctctgttcc tctgtgcctc ttaatttg
//
LOCUS       DATAVD010001572         3921 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2755978, whole genome shotgun sequence.
ACCESSION   DATAVD010001572 DATAVD010000000
VERSION     DATAVD010001572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3921
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2755978"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1513)
                     /locus_tag="VHX39_30170"
     CDS             complement(<1..1513)
                     /locus_tag="VHX39_30170"
                     /inference="COORDINATES: protein motif:HMM:NF019157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /protein_id="HEX3995460.1"
                     /translation="MGLFGLVALAGSPAMATPCTNLQSLQLQHATITSAADNTTGVFT
                     APGSSPITGLPPFCRVTATLTPSSDSSIKIEVWLPESGWNGRFLGTGGGGFQGVFTYS
                     ELAAGISAGFASTNSDLGTGTAGCNPLFCGSAGNMGNALAAAFGDPSAPSTGLFGHPE
                     RIKDFGFRAIHLMTVHGKEIGQAFYGQKAHRAYFAGCSTGGQNALMEAQRFPDDYDGI
                     LAGAAAFNRTHLHTGAISAWQNTHKTPGRFIQPGQMTLINQAVIKQCVGQDGGAKTDQ
                     FLTDPRDCHFDPKVLQCTGGALPPACLTPEQVTTMQNYYLGAIDPVNHQVINPGYERG
                     NETDNVLALGVALQEQLPEPAFDGLFYWVFGPSFGYPAGAVNFTNFDFHRDMDKVDDQ
                     LAAVLNATSTDLSDFRGHGGKLLMYHGWADPLIPSATSINYFNALVGNSGHGFEQVNF
                     MHGNPALERTQSYARLFMVPGMYHCSGGPGPNTFDALTPLVNWVERGVAPETIV"
     gene            complement(2104..3291)
                     /locus_tag="VHX39_30175"
     CDS             complement(2104..3291)
                     /locus_tag="VHX39_30175"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX3995461.1"
                     /translation="MVSSGLNVAIVGGGIGGLFAANALLAQGMRVAVYEQAPAIGEVG
                     AGVFLTPNSVRHLQRIGLEPSVEKWGARVGHGSHYFRHDGAPIAPVQVTDSAGWNATF
                     GMHRADLVEMLANALPPGTVHTGHRATGFDQDRNHARVSFANGASAEGDIVIAADGIH
                     SELRPHVFAASQPVFSGSVAYRGLVAHERVPGWPTDRWQMWLGKGRHFLAFPVRAGKL
                     INYVGFVPTDEEMKESWTAPGNPDVLRQAFAGWDSRIAQLLGEVTMTFRWALYDREPL
                     PVWTKQRLGLLGDAAHPMLPHLGQGANQSIEDGIALATILARADRASAPSALLAYERL
                     RRERVAQVQRGARENGLRYDSAYSDLGVRDAEITAHAAFRKRLYDHDVLPDAQAAAAA
                     LAG"
     gene            3408..>3921
                     /locus_tag="VHX39_30180"
     CDS             3408..>3921
                     /locus_tag="VHX39_30180"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX3995462.1"
                     /translation="MSGAYTQLLVWLGRPAAALAVLLVLSAASAAPARAGDYPDRPVK
                     IIVPFAAGGTADAVPRLVADWLSRKWGQPVIIENRTGAAGNIGADFVYHAAPDGYTLL
                     SCPPPPLVINQNLYPQLGFEPAKFEPIIVMAHVPNALIVNPGKIKASSVPELIDYLEK
                     NPDQVTAANQG"
BASE COUNT          714 a         1256 c         1254 g          697 t
ORIGIN      
        1 cgacgatcgt ctccggcgcc acgcctctct cgacccagtt gacgagcggg gtgagcgcat
       61 cgaacgtgtt ggggccaggc ccgcccgagc agtgatacat cccgggcacc atgaacaggc
      121 gcgcgtagct ctgggtccgc tccagtgccg ggttgccatg catgaagttt acctgctcga
      181 acccgtgacc gctgtttcca accagcgcgt tgaagtaatt gatgctggtc gccgacggga
      241 tcagcgggtc ggcccagccg tgatacatca gaagcttgcc accatgcccc cggaagtcgc
      301 tgagatcggt gctggtcgcg ttcagcaccg cggcgagctg gtcatcgact ttgtccatgt
      361 cgcggtggaa gtcgaaattg gtgaaattca ccgcgcccgc cggatagccg aagctcgggc
      421 cgaacaccca gtagaacagg ccgtcaaagg ccggctcggg aagttgctcc tgcaacgcta
      481 caccgagcgc gagcacattg tcggtctcgt tgccacgttc gtaacccgga ttgatgacct
      541 gatggttcac cgggtcgatc gcgccgaggt agtaattctg catggtcgtg acctgctccg
      601 gcgtcaggca tgccgggggc agggcgccgc cggtgcactg cagcaccttc gggtcgaaat
      661 gacagtcccg cggatcggtc aggaactggt ccgtcttggc gccgccgtcc tggccgacac
      721 attgcttgat cacggcctga ttgatcagcg tcatctggcc gggctggatg aagcggcccg
      781 gggtcttgtg ggtgttctgc cacgccgaaa tcgcaccggt gtgcaggtgc gtgcggttga
      841 acgctgccgc gccggccagg atgccgtcat agtcgtcggg gaagcgctgt gcttccatca
      901 acgcattctg gccgcccgtc gagcatccgg cgaagtaggc ccgatgggcc ttctgcccgt
      961 agaacgcttg gccgatttcc ttgccgtgca ccgtcatcag gtggatcgcc cggaaaccga
     1021 aatccttgat tcgttcggga tgcccgaaca agcccgtcga tggcgccgac gggtcgccga
     1081 acgctgctgc cagcgcattg cccatgttgc ccgctgaacc gcaaaacagc gggttgcatc
     1141 ctgctgttcc ggtgccgaga tcgctgttgg tcgacgcaaa gcccgcgctg atgccggcgg
     1201 cgagttcgct gtaggtgaac acgccctgga atccgccgcc gccggtgccg aggaatctgc
     1261 cgttccatcc gctttcgggc agccagacct cgatcttgat gctggaatcc gagctggggg
     1321 tcagtgtcgc ggtgacgcgg cagaagggtg gaagccccgt gatcgggctc gaacctggag
     1381 cggtgaagac cccggtggtg ttgtccgccg ccgacgtgat cgtggcatgc tgtagctgca
     1441 aggattgcag attggtgcac ggcgtcgcca ttgcgggcga gccggcgagc gcgacaaggc
     1501 caaacaggcc catggccgtg ccgacgagat aggatcgatg acgtatcatg ctgtcctccc
     1561 ctctttattg attgattgta gtcttgtggg accggcacga tacccgaaca atatgacagc
     1621 ggcaatgctg cgtgcgctgc acacgagcca caactcgaga gtgatcccac aaaaaatgcg
     1681 acagtgtccg gtgggcagtg atgcatgacg cttttgctgc gcgaggaagg gggccggcaa
     1741 attcaccgtc cagcagcacg accgcgagcg ccgccagtat ttcggaatgc atgcgggaag
     1801 tttcgcggag aagattttcg ccgttgtggc tcggttggca gcaatggacg actgccaaat
     1861 ccgcctgcca cgatgcatgc gttgctattt tcgcagccgt atcgacacgc ccgccgggca
     1921 ggcccatgtt tttggctatg cgccacgggt gaaacccgtt tcactggcgc ggaagaggcc
     1981 aggaagatgc aacaattgcg tgcactgctg aataaaacgc cgtcccggct tcgacgacgc
     2041 atcactgata tcgtcgccat cgccgccgcc agcctgccgg ccgccggcgc ctgaccacgt
     2101 cgctcagccg gccagcgccg ctgctgccgc ttgcgcgtcc ggaagcacgt cgtgatcgta
     2161 gagccgcttg cgaaaggcgg cgtgcgcggt gatctcggcg tccctcacac ccaagtcgga
     2221 ataggccgaa tcgtagcgca gcccgttttc gcgtgcgccg cgctggacct gcgcgacgcg
     2281 ttcccggcgc agccgctcgt aggcgagcaa cgcggaaggc gcgctcgccc ggtcggcgcg
     2341 tgccaggatg gtcgcgagcg cgatgccgtc ctcgatcgac tgattggcgc cttgcccaag
     2401 atgcggcagc atcgggtggg cggcatcgcc tagcaggccg agcctctgct tggtccagac
     2461 cggcaacggc tcgcgatcgt agagcgccca acggaaagtc atcgtcactt cccccagcaa
     2521 ttgggcgatg cgcgaatccc atccggcaaa cgcctgccgc agcacatcgg gattgcctgg
     2581 cgccgtccag gactccttca tctcctcatc ggtgggcacg aacccgacat agttgatcag
     2641 cttgccggcg cggaccggga aggcgaggaa atgccggccc ttgccgagcc acatctgcca
     2701 gcggtcggtc ggccaacccg gaacacgctc atgcgcgacc aggccccgat aggcgaccga
     2761 ccctgaaaac accggttggg atgcggcgaa cacatggggc ctaagctccg agtgaatgcc
     2821 gtccgcggca atgacgatgt cgccctcggc ggaagcgccg ttggcaaaag ataccctcgc
     2881 gtggttccgg tcctgatcga aaccggtggc gcgatgcccg gtatgaacgg tgccgggggg
     2941 cagggcgttc gcgagcatct cgacgagatc ggcgcggtgc atgccgaagg tcgcattcca
     3001 gccggcggag tccgttacct ggaccggcgc aatcggggct ccatcgtgac ggaagtagtg
     3061 ggaaccatgg ccaacgcggg cgccccattt ctcgacagat ggttcgagtc cgatccgctg
     3121 cagatgccgc acgctgttgg gagtgagaaa tacgcccgcg ccgacttcgc cgatcgccgg
     3181 cgcctgctcg tagaccgcga cccgcatccc ctgggccagg agcgcgttgg ccgcgaacag
     3241 accgccgatg ccgcctccga cgatcgcgac attgagaccg gaagacacca ttcaactcct
     3301 tgccaccaga gacagaaaaa agtgttgcgc ggttgtactc tcacacagac caaggcattt
     3361 tgccatcaag cacggcccaa ccgtggaaaa atcggggaag gaatttcatg tccggcgcct
     3421 acacccagct tttggtttgg ctcggccgac cggcagccgc cttggcggtt ctgttggtcc
     3481 tgtccgcagc gtcggccgcg ccggcgcgcg ccggcgatta tccagatcgg ccggtcaaga
     3541 tcatcgtgcc ctttgccgcc gggggcaccg ccgacgcggt ccctcggctg gtcgccgact
     3601 ggctgtcgcg caaatggggc cagccggtga ttatcgagaa ccgcaccgga gccgccggaa
     3661 acatcggtgc cgacttcgtc tatcatgcgg ctcccgacgg ttacacgctg ctctcctgtc
     3721 cgccgccgcc gctggtgatc aaccagaatc tctatccgca actcggcttc gagcccgcga
     3781 aattcgaacc catcatcgtg atggcccacg tgccgaacgc gctgatcgtc aaccccggca
     3841 agatcaaggc gtcgagcgtg ccggagctga tcgattacct cgagaagaac cccgatcagg
     3901 taacggcggc caaccagggc a
//
LOCUS       DATAVD010001573         3681 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2572665, whole genome shotgun sequence.
ACCESSION   DATAVD010001573 DATAVD010000000
VERSION     DATAVD010001573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3681
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2572665"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1305
                     /gene="boxB"
                     /locus_tag="VHX39_30185"
     CDS             <1..1305
                     /gene="boxB"
                     /locus_tag="VHX39_30185"
                     /EC_number="1.14.13.208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA];
                     GO_process: GO:0010128 - benzoate catabolic process via
                     CoA ligation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoyl-CoA 2,3-epoxidase subunit BoxB"
                     /protein_id="HEX3995463.1"
                     /translation="QDFPVYLRTAVGVGSDGWAKYGFVRMPEYRWGILLAPAVEGRTI
                     PFGAHKGEPAWQEVPGEYRAMLRRLLVIQGDTEPASVEQQRHLGATAPSLYDMRNLFQ
                     VNVEEGRHLWAMVYLLQKYFGRDGREEADDLLRRRSGHEDTPRMLGAFNERTPDWLSF
                     FMFTFFTDRDGKMQLAALAQSGFDPLSRTCRFMLTEEAHHMFVGETGVSRVLQRTAEA
                     MKEAGIDDPYDIERVRALGVIDLPTIQKKANLHFSLTLDLFGNEISTNAANAFNAGLK
                     GRYREDKLTDDHQLMASVYPVQRPRGGEIVREDVPALSALNMRLRDDYVEDAAVGVTR
                     WNRVLERAGTTFRMTLPHVAFNRRIGEFSAIHTDTTGTVLTTDNWHARRESMLPSIGD
                     NLFINSLMRPSLQPGAYAGWIAPPRVGVDNMPGDFSYVRLES"
     gene            1368..2477
                     /locus_tag="VHX39_30190"
     CDS             1368..2477
                     /locus_tag="VHX39_30190"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3995464.1"
                     /translation="MTIDVAKPTEHPAGASRLAIADCDIHQSPKLGMKGLYPYLEKRW
                     QDHLEMFGPLPKQAFEAGPAYPKSQPDASRRDAWPPNGGRPGSDLAFMRSHHLDPHNI
                     ALGVLNMIRPHPGSFQNGYLADALCQAMNRWQVAEWTQPEPRLKGSILVPYEDGEASA
                     AEIERWAGHSDYVQVLLLSRTAEPAGQKRYWPIYRAASEAGLPVGIHAFGFGGFPVSG
                     GGWPSFYIEDMVGHAQSCQTMLSSMVLEGIFERFPRLKIVVVEAGFAWLPSLAWRLDK
                     LWHRLRAELPHVKRPPSEYIRDHIWLTTQPMEEPALKSQALDAIDWIGWERLLFATDY
                     PHWDYDDPAHVLPPNVDPGRRRDFFRNNARALYGV"
     gene            2552..>3681
                     /locus_tag="VHX39_30195"
     CDS             2552..>3681
                     /locus_tag="VHX39_30195"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3995465.1"
                     /translation="MITKFDSLFAGHTDVEDIGYGGIPINDRLYDNAHLSTALSKAEH
                     IAQKMDGLGYSTFWMAEHHFQREGTECIPNVLLMALHLTHLTRNINIGCGFNVTPMWH
                     PLRLAEDYAMADILSHGRVVFGVARGYHTREVETFGSPLIDQDANRELFEEQVDIIFK
                     SFNEESFSHKGKHYTLPPEVPYRGYTLKELTLVPRPARLPVECWQPIQGGSERALAFM
                     AKHGIQGMVGGGSAEGGAMHSVVLKWQAEHAKIGKHIDLGERLCFGFHFYMGDSKEQC
                     IRDAAKYYEENMKMFGELRLSRAMTDEQIEIMRDRTKAPTAKLPRIEDAVKSGGFLTG
                     SADEIIGHLKALEKAYPGLDRISISPSLGVPEAVILEQVERFA"
BASE COUNT          707 a         1069 c         1207 g          698 t
ORIGIN      
        1 caggattttc cggtgtacct gcgcaccgct gttggtgtcg gcagtgatgg gtgggcaaag
       61 tacggattcg tccggatgcc ggaatatcgg tggggcatct tgctggcgcc tgcggtcgag
      121 gggcggacca ttccgttcgg agcgcataag ggcgaaccgg cctggcagga agtgcctggc
      181 gaatatcgcg cgatgctacg ccgtttgctg gtgatccagg gggacacgga gcccgcttcc
      241 gtcgagcagc agcgtcatct gggggcgacg gcgccgtctt tgtatgacat gcgcaatctg
      301 ttccaggtga atgtcgagga aggccgccat ctctgggcaa tggtctatct gctgcagaaa
      361 tacttcggcc gcgatgggcg ggaggaagcc gacgacctgt tgcgccgccg atcaggtcac
      421 gaggacacac cgcgcatgct gggggcgttc aacgaacgga ctcccgattg gctgtcgttc
      481 ttcatgttca ccttctttac tgatcgcgac ggcaagatgc agttggccgc attggcgcag
      541 tccgggttcg acccgctgtc gcgcacctgc cgcttcatgc tgaccgaaga agcgcaccat
      601 atgttcgtgg gcgaaaccgg tgtcagccgc gtcctgcagc gcacggcgga ggcgatgaag
      661 gaagccggca tcgacgaccc ttatgatatc gagcgcgtgc gggcgctggg cgtcatcgat
      721 ctgccgacga tccagaaaaa agccaatctg catttttcgc tgacgctgga tttgttcggt
      781 aacgaaatca gcaccaacgc ggcgaatgcg ttcaacgccg ggcttaaagg gcggtatcgc
      841 gaggacaagc tgaccgacga tcatcagctt atggcttcgg tctatccggt gcagcggccg
      901 cgtggagggg agattgttcg agaggacgta ccggcgctgt cggcgctgaa catgcggctg
      961 cgcgacgatt atgtggagga cgccgccgtc ggcgtcacac gctggaaccg cgtgctggaa
     1021 cgggctggga ccacattccg catgaccttg ccgcatgtcg ccttcaaccg tcgcatcggc
     1081 gagttcagcg ccatccacac ggacacgacc ggcaccgtac tcaccaccga caactggcac
     1141 gctcggcggg agtcgatgtt gccgtccatt ggcgacaatc tgttcatcaa cagcctgatg
     1201 cggccgtcgt tgcaacccgg ggcgtatgcc ggctggatcg ccccacctcg cgtgggggtc
     1261 gacaatatgc cgggtgattt ctcctatgtc cggctggaat cctgacgcac cgtagccacc
     1321 acgccggatt cgccgctatc ctggccgaca gccaaggagc ggtcgccatg accatcgatg
     1381 tcgccaagcc aaccgaacac ccagccggtg cctcgcgctt ggccattgcc gactgtgaca
     1441 tccaccagtc gcccaaactg gggatgaagg ggctttatcc gtatctggag aagcgctggc
     1501 aggatcatct ggagatgttc ggcccactgc cgaagcaggc attcgaggca gggccggctt
     1561 atcccaagag ccagccggat gcatcgcggc gggatgcctg gccgcccaac ggcggtcgtc
     1621 cgggcagcga cctggcgttc atgcgatctc accatctcga tccgcataac atcgcgcttg
     1681 gcgtgctgaa catgatccgc ccgcatccag gcagcttcca gaacggctat ttggcggatg
     1741 cactgtgcca ggcgatgaac cgctggcagg tggcggaatg gacgcagcca gaaccgagac
     1801 tgaaagggtc gatcctggtg ccgtatgagg acggcgaggc ctcggccgcg gaaatcgaac
     1861 gctgggccgg gcactccgac tacgtgcagg tcctgctgct gagccgcacc gccgaaccgg
     1921 ccgggcagaa gcggtattgg ccgatctatc gcgcggcgtc ggaggctggg ctgcccgtcg
     1981 gcatccacgc gttcggcttc ggcggctttc cggtgtcggg cggcggttgg ccgtcattct
     2041 atatcgaaga catggtcggc catgcgcaat cctgccagac gatgctgagc agcatggtgc
     2101 ttgaagggat tttcgaacga tttccgagac tgaagatcgt ggtcgtggag gccggctttg
     2161 cctggctgcc gtccctggcg tggcggctgg ataaactgtg gcaccggctg cgggcagaac
     2221 tgccgcatgt gaaacgccca ccatcggagt acatccgcga tcatatctgg ctgacgactc
     2281 agccgatgga ggagccggcg ctgaaatccc aggcattgga cgcgatcgat tggatcgggt
     2341 gggagcggct gctgttcgcg accgactatc cgcattggga ttacgacgat ccggcgcacg
     2401 tgctgccacc caacgtcgac cctggacggc gccgcgattt ctttcgcaac aacgctcggg
     2461 cgctttacgg cgtctaaccc gtagcgggtc gtctggcttg ctaacgtcgg ccgtctgcct
     2521 actattcggt agggacggag gaacgacggc aatgatcacg aagtttgaca gccttttcgc
     2581 gggccacacg gacgttgagg acatcggtta cggtggcatt ccgatcaatg accggctgta
     2641 tgacaacgcc cacctgtcga ccgctttgtc caaggcggag cacatcgcgc agaagatgga
     2701 cgggcttggc tactcgacct tctggatggc ggagcaccac ttccagcgcg aaggcaccga
     2761 gtgcattcca aacgtgctgc tgatggcgct gcacctgacg catctgacca ggaacatcaa
     2821 catcggctgc ggtttcaacg tgaccccgat gtggcatccg ctgcgcttgg ccgaggatta
     2881 cgccatggcc gatattctgt cgcacggacg cgtggtgttc ggggtcgcgc gtggctatca
     2941 cacgcgggaa gtcgaaacgt ttggctcgcc gctgatcgac caggatgcca atcgcgaact
     3001 gttcgaggaa caggtcgaca tcatcttcaa atcattcaac gaggagtcgt tctcgcacaa
     3061 gggcaagcac tataccctgc cgccggaagt gccgtatcgc ggctatacgt tgaaggaact
     3121 gactctggtg cctcggcctg ctcggctgcc agtggagtgt tggcagccga tccagggcgg
     3181 atcggagcgg gcgctggcgt tcatggcgaa gcatggtatc caaggtatgg tcggcggcgg
     3241 ctcggccgag ggcggagcga tgcacagcgt cgtgctgaaa tggcaggccg aacatgccaa
     3301 gatcggcaag catatcgacc tgggcgagcg gctttgcttc ggtttccact tctacatggg
     3361 cgacagcaaa gagcagtgca tccgcgacgc ggcgaaatat tacgaagaga acatgaaaat
     3421 gttcggtgag ctgcggctga gccgagcgat gacggatgag caaatcgaga tcatgcgcga
     3481 ccgcacgaag gcaccgacgg cgaagttgcc gcggatcgag gatgcggtga aatccggcgg
     3541 gttcctgact gggtcggccg atgagatcat cggtcatctg aaagcgttgg aaaaggccta
     3601 tccgggcctg gatcggatct caatcagccc gtctctcggt gtgccggagg cggtgattct
     3661 ggaacaggtg gagcggttcg c
//
LOCUS       DATAVD010001574         1602 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2756055, whole genome shotgun sequence.
ACCESSION   DATAVD010001574 DATAVD010000000
VERSION     DATAVD010001574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2756055"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(76..1416)
                     /locus_tag="VHX39_30200"
     CDS             complement(76..1416)
                     /locus_tag="VHX39_30200"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995466.1"
                     /translation="MLTPHQSGAEARLETQALGPLQLRVALLCTLAQMFDGYDITSIG
                     MAVPSLSAAWGIPGPAFANTFVMSSVGIMVGALLSGPAGDRLGRKPILLASLACLTVS
                     SLACVYSTTIGQLIGWRFVTGIGIGGIMPATVALTSDYVPERLRAPIVMVIFTGNPLG
                     GFLGGQLIAQLLPHFGWPVIFWIGGLLPLALIPVMLFWLPESPRFLLARGRMTTRTER
                     LLQTLNIETGAQSAAHVVDVATGNPVAGLFRDGMAITTVLVWILYFANLLSIYLISYW
                     LPTVLNLSGLSPADSVFAASLMSAGPLVSVFAMAPLARHFGPQRVLAVMLVTGVAVIA
                     IVGLANPPHDLLLLAIFLMGCCTVGSMTGINGMTAALYPARIRTTGMGWALGIGRLGG
                     IGGPWLGGVLLVAGWPPRQIFLCACITALIGTFCVVMLHILKRRHAPQPVPRLA"
BASE COUNT          335 a          519 c          534 g          214 t
ORIGIN      
        1 ggtcaaccca gagcgccaat cagcatcgct atcgcgcccc ctacccaggc aagcgcagcc
       61 cgcgggcctt cgtcgttacg ccaggcgcgg gaccggctga ggcgcgtggc gccgtttcag
      121 aatatgcagc atcacgacgc agaacgtgcc gatcaacgcg gtgatgcagg cgcagagaaa
      181 gatttgccgt ggcggccagc cggcgaccag caggaccccg ccaagccacg gcccgccgat
      241 gccgcccaac cggccgatcc ccagggccca acccataccg gtggtccgga tgcgagcggg
      301 atagagcgcc gcagtcatgc cgttgatccc ggtcatactg ccgaccgtgc agcagcccat
      361 gagaaaaatc gccagcaaca gcaggtcgtg cggcgggttc gccaggccaa cgatcgcaat
      421 caccgccact ccggtgacca gcatgaccgc cagcacacgc tgcggtccga aatgcctcgc
      481 cagtggtgcc atggcgaaca cgctgaccaa cggaccggcg gacatcaggc tggcggcgaa
      541 taccgagtcg gcgggcgaca gaccggacaa attcagcacc gtcggcagcc agtaactgat
      601 caggtagatg ctcagcagat tggcaaaata caggatccag accagcaccg tggtgattgc
      661 cataccgtct cggaacagtc cggcaacggg gttgccggtg gcgacatcca ccacgtgagc
      721 cgccgactgc gcgccggtct cgatgttcag cgtctgcaac agacgctcgg tgcgcgtggt
      781 catgcgtcca cgcgccagca ggaaacgcgg cgactccggc agccagaaca gcatcaccgg
      841 gatcagggcc aacggcagca gaccaccgat ccaaaagatc accggccagc cgaaatgcgg
      901 cagcaattgc gcaatcagtt ggcctccgag gaagccgccc aacgggttgc cggtgaagat
      961 caccatgacg atcggagcgc gcaaccgctc gggcacgtag tcggaggtca gtgcgacggt
     1021 ggctggcatg atgccgccga tgccgatgcc ggtgacgaag cgccatccga tcagttggcc
     1081 gatggtggtc gaatacacgc aggcaagcga ggagaccgtc aggcatgcca gactggcgag
     1141 caggatcggc ttgcggccca gtcgatcgcc ggccggaccg gagaggaggg ctccgaccat
     1201 gatgccgaca ctgctcatga cgaaggtgtt ggcgaaggcg ggacccggaa tgccccaggc
     1261 ggcggacaac gacggcacgg ccatgccgat cgacgtgatg tcgtagccat cgaacatctg
     1321 cgccagcgtg cacagcaacg cgacgcgcaa ttgcaaaggc ccgagagcct gggtttccag
     1381 ccgggcttcg gcgccggatt ggtgtggggt gagcatggcg gacgtggttc ctcgacacgg
     1441 gccggttgct ccggccgctg ggtgcatatt ggggccattt gatgcgcaga ggaaagcgat
     1501 gggggccggt ctggcatggc aatcgcctga acagagggag cgccggggcg ttccgccccg
     1561 aaccccagac caggagggcg ctgccctcct ggacctcccg cc
//
LOCUS       DATAVD010001575         3664 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_708778, whole genome shotgun sequence.
ACCESSION   DATAVD010001575 DATAVD010000000
VERSION     DATAVD010001575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3664
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_708778"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..737)
                     /locus_tag="VHX39_30205"
     CDS             complement(<1..737)
                     /locus_tag="VHX39_30205"
                     /inference="COORDINATES: protein motif:HMM:NF042846.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="collagen-binding domain-containing protein"
                     /protein_id="HEX3995467.1"
                     /translation="MRTIFHIAGILFVWVALVPGCAAAATLTDSQIFSQFNAVIFDNF
                     NASSEVEGRTVVGGNVTSGSNFTIKSGLSASSFGALSVYGSVTASATLNIDNGGSVAI
                     AGSNSADFNLNNGGSAYVGGSNSGNLAASGGAGNLTIVGTNSGALSLSGGGSVFVGNG
                     NTGTILLNGDSLTYAGSEGTVTNINGGAITQVANGNLAAPTSTLGSFATTFQTPLTQL
                     STQLSGVAPNSTATSSSGTVTFNATPN"
     gene            927..2066
                     /locus_tag="VHX39_30210"
     CDS             927..2066
                     /locus_tag="VHX39_30210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010668532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3995468.1"
                     /translation="MPDLTLPAESPPADRFAGTPVLSVIIPCFNERPNVAPMIAKLDA
                     ALDGIAWEVIYVDDNSPDGTTQEVRRIARQDSRVRCIRRVGRRGLASAVIEGALSSSA
                     DYVAVIDGDLQHDETRLPVMLSALRAGGCDLAVASRHVEGGDNAGLSSRFRHALSDGG
                     IWLAQAFLPVRLNDPMSGFFMLPRPLFEDLARGLNGQGFKILLDLVLSSTAPLRVLEV
                     PARFRERAAGESKMDALVMVQFAGLLLDKIFGGLLPLRFFSFALVGALGILVHLAVLG
                     LLRGSTGLGFEIEQALATVVAMVFNFQLNNMITYRDQRLKGPRLWRGLLLFMVVCGFG
                     AIANVGIAHVLYEQHETWTVAGGIGAMIGVVWNYAVSATLVWRFR"
     gene            2021..3487
                     /locus_tag="VHX39_30215"
     CDS             2021..3487
                     /locus_tag="VHX39_30215"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX3995469.1"
                     /translation="MELRCLGDPGLALSVKTLAAALAVVTLIRLAVAATAPLAPDETY
                     YWVWSHALAFGYLDHPPMVALWIRAGTMLAGQSAFGMRLLGPLAAGAASCLLFDAARV
                     LFPETKAAIVAVVLLNASLLLGVGSVIMTPDSPLLFFWTATLWAMARIAAGGPGVWWL
                     VAGVLGGAALDSKYTALLLWIGVGLWALLVPVGRSWLRRWQPWVACVIGFALFAPVLA
                     WNATHGWAGFVKQGGRVEDWRPARAAGFLAELVGGQIGLATPLVWVLCMVGLVVAARH
                     CWRSRDPGWSLLAALSLPPVLVFVQHAVGDRVQGNWPAIIYPALAIAAGGLLPRRRWW
                     IGASALGFTITALAYVQATTGLLPLPPRLDPIAMRLSGWDNLAAQVRMLQDSTGAAYV
                     AADGYALASELAWWLPPGAHVAGPDERWSLTTLPIARVKGETGLLVRDARRPEAPDPT
                     TWKRAERIGTVTRDGLPGSAFAVFRVTSARNFVELPAR"
BASE COUNT          560 a         1122 c         1187 g          795 t
ORIGIN      
        1 ctgtttgggg tggcgttgaa ggttacggtg ccactcgatg atgtcgcggt actgttcggc
       61 gcaacaccac tcagctgggt ggataattgg gtcaatggcg tctgaaaggt ggtggcgaat
      121 gatcctaacg tgctggtggg cgcggccagg ttcccgttgg ccacctgcgt tatggcgccc
      181 ccgttgatgt tggtcacggt gccctcgcta cccgcatagg tcagcgaatc gccgttcagt
      241 aggatggtgc cagtgttgcc gttgcccacg aaaacgctgc caccgccaga cagcgacagg
      301 gcgccactat tcgtgccgac gatggtcaga ttgcccgcgc cacccgacgc ggcaaggttg
      361 ccgctgttgg aacctccgac ataggcggat ccgccattgt tcaaattgaa atcggcacta
      421 ttgctgccgg caatggcgac cgatcccccg ttatcaatgt tgagggtagc tgaagcggtc
      481 acgctgccat aaaccgacaa ggcgccgaaa gatgacgcgc tcagcccgga ttttattgtg
      541 aaattcgagc cgcttgtcac attgcctccg acaacggtac ggccttcaac ctcagagctg
      601 gcgttgaaat tatcgaagat gacggcgttg aattggctaa agatctggct gtcggtcaag
      661 gtcgctgcgg cagcgcatcc cgggaccaga gccacccaga caaacaggat ccctgcaatg
      721 tgaaaaatag tgcgcatgat cgtcattcgc caaatgtcta attattggca taatattgcc
      781 tggattgtcc taatttgcaa tgattatttt ttattttcgt ctccgccaga tggcctgcca
      841 tcgcgtcctg gcactggcct tgacgcgggg ccaccgtctt gtatgtccag aaaacactgt
      901 ccaatcatgg aattcatcag cagcgtatgc ctgatctgac cctcccggcc gaatcacccc
      961 cggctgaccg gtttgccggc acgcctgtgt tgagcgtcat catcccgtgc ttcaatgagc
     1021 gtccgaacgt ggcgccgatg attgccaagt tggatgccgc tctcgacggc atcgcctggg
     1081 aggtcattta cgtcgacgac aacagccccg acggcaccac acaggaggtc cgccgcatcg
     1141 cccggcagga cagccgggtc cgctgcatcc gccgtgtcgg ccggcgcggc ctggcctccg
     1201 ccgtgatcga gggcgcgctg tcctcctctg ccgactatgt cgcggtcatc gacggtgacc
     1261 tgcagcacga cgaaacccgt ctgccggtca tgctttcagc ccttcgggct ggcggctgcg
     1321 atctcgccgt cgccagccgc catgtcgagg gtggcgacaa cgcgggtctg tccagccgct
     1381 tccgtcatgc cttgtccgat ggcggcattt ggctggcaca agcgttcctg ccggtgcgtc
     1441 tcaacgatcc gatgagcgga ttttttatgc ttccccgccc gctgttcgag gatctcgccc
     1501 gcggcctgaa cggtcagggc ttcaagatcc tgctcgacct cgtgctcagc agcaccgcgc
     1561 cgctgcgggt cttggaagtc cccgctcgtt tccgtgaacg cgccgccggt gagagcaaga
     1621 tggacgcctt ggtgatggtc cagttcgccg gcctgctgct ggacaaaata ttcggcggcc
     1681 tgctgcccct gcgctttttt tccttcgcac tggttggcgc gctcggcatc ctggtccatc
     1741 ttgcggtact gggtctgtta cgcggatcca ccgggctagg ctttgagatt gagcaggcac
     1801 tggcgaccgt ggttgcgatg gtgtttaatt tccaactcaa caacatgatc acctatcgcg
     1861 accagcggtt gaagggaccc cgcctctggc gtggcctgct tctgttcatg gtggtctgtg
     1921 gcttcggcgc catagccaat gtcggcatcg cccacgtgct gtatgagcag cacgagacct
     1981 ggaccgtggc cggcggaatt ggcgcgatga tcggcgtggt atggaactac gctgtctcgg
     2041 cgaccctggt ctggcgcttt cggtgaagac gcttgccgcc gcgctggcgg tggtgaccct
     2101 gatccggctg gccgtcgcgg cgacggcccc gctggcgccg gatgagacct attactgggt
     2161 ctggtcgcat gccctggcgt tcggatacct cgatcatccg ccgatggtgg ccttgtggat
     2221 cagggcaggg accatgctgg ctgggcagag cgcgttcggc atgcggttgt tgggtccatt
     2281 ggccgccggc gctgcctcct gtctgttgtt cgacgccgct cgagtgctgt ttccagagac
     2341 caaggccgcg atcgtggcgg tcgtgctgtt gaacgcctca ctgctgttgg gcgtcggcag
     2401 cgtcatcatg acccctgatt cgcccctgct gttcttctgg acggccactt tgtgggccat
     2461 ggcgcgcatc gccgctggcg gcccaggggt ctggtggctg gtcgccggcg tgttgggcgg
     2521 cgccgccctt gacagcaagt acaccgcgtt gctgctgtgg atcggggtcg gactgtgggc
     2581 cctactggtc cccgtcggcc ggtcttggct gcgccgttgg caaccctggg tggcctgcgt
     2641 gatcggcttt gcgctgttcg cgccggtact ggcgtggaac gcgacgcacg gttgggcggg
     2701 cttcgtcaag caaggcggcc gtgtcgagga ctggcggcca gctcgagccg ccggctttct
     2761 tgccgagttg gtcggtggac agatcgggtt ggcgacaccg ttggtctggg tgctctgcat
     2821 ggttgggctg gtcgtggcgg cgcgccattg ctggagatcg cgcgatcccg gatggtcgct
     2881 gctggccgcg ctgtcgctgc caccggtgct ggtgttcgtc cagcacgcgg tcggcgaccg
     2941 tgtgcaaggt aactggccgg cgatcatcta tccagccctg gcgatagctg ccggcggttt
     3001 gttgccgcgc cggcgctggt ggatcggcgc gtccgcgctg ggtttcacga tcaccgcact
     3061 ggcctatgtt caggcaacga ctggcttgtt gccattgccg ccgcgtctcg atcccatcgc
     3121 tatgcgtctg tccggatggg acaatctcgc cgcgcaggtg cggatgctcc aggactcgac
     3181 cggtgcggcc tatgtcgcgg cagatggcta tgcactggcg agcgaattgg cctggtggct
     3241 gccccctggc gcccacgtcg ccggcccaga cgagcgctgg tccctgacga cgctgccgat
     3301 cgcgcgggtc aaaggagaaa cgggtttgct ggtccgcgat gcgcgccggc cagaggcgcc
     3361 cgatccaacg acctggaagc gagccgagcg tatcggcacc gttacacgcg atggtctgcc
     3421 tggtagcgct ttcgcagtct ttcgcgtgac gtccgcccgc aattttgtcg agcttccggc
     3481 tcgctgatgt cgtgttgagc ggccgtggcc ggcgaaccgt gacaaagcgg gcccggcaga
     3541 taactgagcg aatgatccta tcagtcctcg gcctgaggcc tatcggttga ccttgtaaag
     3601 gggcagcgat gcgagcaacg cccgttcgtc gccgcggaaa tcattcacca cccgcgatgt
     3661 ggtg
//
LOCUS       DATAVD010001576         1599 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1638962, whole genome shotgun sequence.
ACCESSION   DATAVD010001576 DATAVD010000000
VERSION     DATAVD010001576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1638962"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..949)
                     /locus_tag="VHX39_30220"
     CDS             complement(<1..949)
                     /locus_tag="VHX39_30220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010516182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEX3995470.1"
                     /translation="MTPPDQLPAILPPGALTTSADLPLVPALIAEAGDAAGWRYVEFF
                     TANIRNPNTRRAYARACARFFAWCEDRGLRLTTIRPFDVATYVEALQETHSAPGVKQQ
                     LAAVRMLFDWLITGQVVPFNPASAVRGPKHVVKTGVTPVLDGKEWRRLLDAIPTETVR
                     DLRDRALIATLTYSFARIGAAVKMRVEDLRPKGAGWQLRLHEKGGKHHQMPCHHALAE
                     ALHAYIAAAGIAEDRKGFLFRTSRGHAAALSEKPMVQSDAWRMIRRRAAAAGINASIG
                     NHSFRATGITAYLANGGALEHAQEMAAHESPRTTKLYDRT"
     gene            1228..>1599
                     /locus_tag="VHX39_30225"
     CDS             1228..>1599
                     /locus_tag="VHX39_30225"
                     /inference="COORDINATES: protein motif:HMM:NF016232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding domain-containing protein"
                     /protein_id="HEX3995471.1"
                     /translation="MKDVREWDESDLVLVVQADQKENTTIDYKRSAALAFKDKSPCKD
                     GKGTIGEKHRADLIRDVASMANAEGGLIIYGIVERKGGYPDHLDDGADPKTVSPEQIE
                     QIILKNINPPVEGFFVHPIVIT"
BASE COUNT          324 a          482 c          518 g          275 t
ORIGIN      
        1 tcgtccggtc gtaaagcttc gtcgtcctcg gactctcatg cgccgccatt tcctgcgcgt
       61 gctccagcgc gccgccgttt gcgagatagg cggtgatccc ggttgcacgg aagctgtgat
      121 tgccgatcga cgcattaatc ccggccgcgg cggcgcggcg gcggatcatg cgccaggcat
      181 cagactggac catgggtttt tcagacagag ccgccgcgtg cccacgcgac gtgcggaaca
      241 ggaaaccctt gcgatcctcg gcgatgccgg ccgcggcgat ataggcgtgc agcgcctcgg
      301 caagcgcatg atggcaaggc atctgatgat gctttccgcc tttctcatgt agccgcaact
      361 gccagccggc acctttcggc cgcaggtctt cgaccctcat tttcacagcc gctccaattc
      421 gcgcaaagga gtaggtgagg gtggcaatca acgctcggtc gcgcaaatcc cgcaccgtct
      481 cggtcgggat cgcgtcgagc agcctgcgcc attccttgcc gtcgagcacc ggcgtcacgc
      541 cggtcttcac cacatgcttc ggaccgcgca cggcggaggc tggattgaac ggcacaacct
      601 ggccggtgat caaccaatca aacaacatcc gcacggctgc gagctgctgc ttcacacccg
      661 gtgccgaatg ggtctcttgc agcgcctcga cataggtggc aacatcgaac ggccggatcg
      721 tcgtcagcct caggccgcga tcctcgcacc aggcgaagaa ccgggcgcac gcccgcgcat
      781 aggcccggcg ggtgttcggg ttgcggatgt tggcggtgaa aaactccacg tagcgccagc
      841 cggccgcgtc gccggcctcc gcgatcagcg ccggcaccag gggaaggtcg gccgaggtcg
      901 tgagggcgcc gggtgggagg atcgcgggga gctggtcggg gggtgtcatg gccccttccc
      961 tagcatgatt ctcacgcatg ataaaggacg ttatcatgcg tgagatgggg ggcacgccgt
     1021 gcacctgaga aactggatta tcacgtggac ggaggggctg agtttggccg gtggacagag
     1081 cccggcgtcg aggggaagcg ctatactcgg tcggaacaat ttcccgaggg gcggcatggc
     1141 atggaacgat ctcgatcaga agcacgaaaa acttacgccg cctgtaaaga gctgtcgcgg
     1201 ctccaactca atgggcagga ggtatgagtg aaagacgtgc gcgagtggga cgaaagcgac
     1261 cttgtcttgg tggtgcaggc tgaccagaag gaaaacacaa ccatcgacta caagcggtcg
     1321 gcggcgctcg cctttaagga caagtcgcca tgcaaggacg gaaaaggcac gatcggcgag
     1381 aagcaccgcg cagacctcat ccgcgacgtg gcctcgatgg cgaacgccga aggcggcctc
     1441 attatctatg gcatcgtgga acgcaagggc ggctatcccg accatctcga cgacggagcg
     1501 gacccgaaga cggtaagccc cgagcagatt gagcagatta tcctcaagaa tatcaatcca
     1561 ccggttgagg gtttcttcgt acacccgatc gtgattacg
//
LOCUS       DATAVD010001577         2542 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_896459, whole genome shotgun sequence.
ACCESSION   DATAVD010001577 DATAVD010000000
VERSION     DATAVD010001577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_896459"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            90..1382
                     /locus_tag="VHX39_30230"
     CDS             90..1382
                     /locus_tag="VHX39_30230"
                     /inference="COORDINATES: protein motif:HMM:NF014774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEX3995472.1"
                     /translation="MDIPPLDLAMKTRTAQVLERCVACGACAEVCPMPGPAGIDASNP
                     GKLTEGILAILRGGEHADAARWAAVCSGSGHCIPQCQHGVDPRFMLTMARLELASRKP
                     DDARRKTGFAGFGSMTTGVRVLSRLQLPPELLARFRPENEPDTAPEVVFYTGCNLMKT
                     PHIALLCLDILDAMQVPYKVMGGPSSCCGILQFRAGDLATSGRIAYRTIDRLREAAPR
                     ALSWCPTCQIQLAEVVAPGKNDDAFDMKPIVRFLAERLDDLRPLMIHPVHKRVGLHEH
                     PGVGGVTESAQAILRAIPGLDFVDLRQPRLGYHCNMLAPLPEFKRSVHLQQLEDAEQA
                     GVTTLAGIYHACHRELCSHERDWPFEVVNFLELVGESMGLTRPDLFKRLKLMQDVDAI
                     LAESAEMIETHHLDLDEARAIIAKDMLGEQPLPLGRGA"
     gene            1453..>2542
                     /locus_tag="VHX39_30235"
     CDS             1453..>2542
                     /locus_tag="VHX39_30235"
                     /inference="COORDINATES: protein motif:HMM:NF015836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995473.1"
                     /translation="MSSSEAVRFVATSGVRVAPKVWALALPSILLLGFALRIGTGLTQ
                     THVLSFDETIQYFEQGHRLAFGSGIVPWEFDDGVRSWLLPGLIALAMRATAWFGDNPV
                     WYVDLVRTVCIALSMVIVFVGFRAGERDSGRMGAIVTGGFCAIWFDLIYFAPAVMTEV
                     LAAHCAIAALYLGVVGKSTTRRGFWVGALFGAAICLRYQYTPALLLAAIWQFRRQTRH
                     WQWVFLGLTAVLLPFSGVLDAITWGGAFQSIWLNFARNSLQGMATAIGTQGDAWYLGY
                     LTVALVPLPLLLGLAVVGGIRFPALGIAALATLVTHSLVPHKEVRFIYLTIAATPILI
                     GLGASYLLRTLAASRGARVITVGAPLFLG"
BASE COUNT          402 a          780 c          824 g          536 t
ORIGIN      
        1 tcattccaac atggcgcccg caagtaccct ggaatgtcgc agcaatatcg ggcatgcttc
       61 ccgaaagctg ttattcgggg cgttaaagca tggacattcc accgctcgat ctcgcgatga
      121 agactcgcac ggcccaggtg ctggagcgtt gcgtggcttg cggggcttgc gccgaggtat
      181 gtccaatgcc tgggccggct ggcatcgacg cctccaatcc cgggaaactc accgagggaa
      241 ttctggcaat cctgcggggt ggcgagcacg cggatgcagc gcgttgggcc gcggtgtgct
      301 ctggcagcgg gcattgtatc ccgcaatgcc agcacggcgt cgatccacgc ttcatgctga
      361 ccatggcacg gctggagctg gcctcgcgca aaccggacga cgctcgccgt aagaccggat
      421 ttgccgggtt tggctccatg accaccggag tccgcgtgtt gtcccgcctg caattgccgc
      481 cggaattgct ggctcgtttc cgcccggaga acgaacccga tacggcgccg gaagtcgtgt
      541 tctacacggg ctgcaacctg atgaagacgc cgcacattgc gttgctgtgc ctggacatcc
      601 tcgatgccat gcaggtgccg tacaaggtca tgggcgggcc gtcctcctgt tgcggcatct
      661 tacagttccg tgcgggcgac ctcgccacct ccggccgcat tgcctaccgc accatcgatc
      721 ggctacggga agccgcaccg cgtgcgctgt catggtgccc gacctgccag atccagttgg
      781 ccgaagtggt cgcccccggc aaaaacgacg acgcgttcga catgaagccg atcgtgcggt
      841 tcctggccga gcggctggac gatctgcgcc cgctgatgat ccacccggtc cacaaacgtg
      901 ttggtttgca cgaacacccg ggcgttggag gcgtcaccga atcagcccag gcgatattgc
      961 gggcgattcc cggtctggat tttgtggacc tgcgccagcc gcggctgggt tatcactgca
     1021 acatgctggc gccgctgccg gagttcaaac ggtcggttca cctgcaacaa cttgaggacg
     1081 cggaacaagc cggcgtcacc acgctcgccg gcatctatca cgcctgccat cgcgaacttt
     1141 gcagccacga acgcgattgg ccattcgagg tggtcaattt cctcgaactg gtgggtgaaa
     1201 gcatgggcct gacccggccc gacctgttca agcgactgaa gctgatgcag gacgtcgatg
     1261 cgatcctggc tgagagtgcg gagatgatcg aaacccacca tctcgacctc gacgaggccc
     1321 gtgccatcat cgccaaggac atgttgggcg agcagccgtt gccgttgggc cgcggcgcct
     1381 gactccgaac gatttcgcaa ccgggcggta aatctgccat cgtcataagc gcgcggttgt
     1441 gtcggagcgc gcgtgtcctc gagcgaagcc gttcggtttg ttgctacgtc gggagtgcgg
     1501 gtcgcgccga aggtgtgggc gctcgccttg ccgtcgattt tgctgcttgg cttcgccttg
     1561 cggatcggca ccggcctgac tcagacccac gtgctgtctt tcgacgagac catccaatat
     1621 ttcgagcaag gccaccggct ggcctttggc tccggcatcg tgccgtggga gttcgatgac
     1681 ggtgttcgct cctggctttt gccggggttg attgcgttgg cgatgcgggc gaccgcctgg
     1741 tttggcgaca atccggtgtg gtacgtcgat ctcgtccgca cggtttgcat cgcgctttcg
     1801 atggtgatcg tgttcgtcgg cttccgcgca ggtgagcgtg acagcggccg catgggcgcg
     1861 atcgtgaccg gaggcttctg tgccatctgg tttgacctga tctattttgc ccccgcggtc
     1921 atgacagagg tgctcgccgc ccattgtgcc atcgcggcgc tgtatctcgg cgtggtcggc
     1981 aagagcacga cgaggcgtgg gttttgggtg ggcgcgttgt tcggcgccgc gatctgtttg
     2041 cgctaccaat acacgcccgc gctgctgctg gcggcgatct ggcaattccg tcgccagacg
     2101 aggcattggc aatgggtgtt tctcggcctg acggcggtgc tgctgccgtt ctccggcgtg
     2161 ctcgacgcaa tcacctgggg cggcgcgttc caatcgatct ggctgaactt tgccaggaat
     2221 tcgttgcaag gaatggcgac cgcgatcggc acccaaggtg acgcctggta tctgggttat
     2281 ctgacggtcg cactggtgcc gctgccattg ctgctgggac tcgcggtcgt gggcggaatc
     2341 cggtttccgg ccctcgggat cgcagcgctg gcgacattgg tgacccacag cctggtgccg
     2401 cacaaagagg tgcgattcat ttacctgacc atcgccgcca ccccgattct gattggtctc
     2461 ggagcgagct acctgctgcg caccctggcg gcttctcggg gcgcccgggt aattacggtt
     2521 ggagcgcctt tgtttctggg ct
//
LOCUS       DATAVD010001578         2783 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_521841, whole genome shotgun sequence.
ACCESSION   DATAVD010001578 DATAVD010000000
VERSION     DATAVD010001578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2783
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_521841"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..174
                     /locus_tag="VHX39_30240"
     CDS             <1..174
                     /locus_tag="VHX39_30240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008852422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3995474.1"
                     /translation="REAVLRRFYRSDKIRNTPGVGLGLSLVAAIVKLHGFRLAIRTGP
                     GGQLAMICPDRQT"
     gene            complement(478..926)
                     /locus_tag="VHX39_30245"
                     /pseudo
     CDS             complement(478..926)
                     /locus_tag="VHX39_30245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542098.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
     gene            complement(953..1705)
                     /locus_tag="VHX39_30250"
     CDS             complement(953..1705)
                     /locus_tag="VHX39_30250"
                     /inference="COORDINATES: protein motif:HMM:NF012455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin"
                     /protein_id="HEX3995475.1"
                     /translation="MSNQIAPAKLLAEFVGTFALIFIGAGATAVIGSSAGLPGVAAIA
                     FAHGLTVMAFAFAYGTVSGGHFNPSVTIAVLAAGAMRAGEAAGYVVSQFAGGILGAFL
                     LRAVLGSAGTGLGTPDLAHNLGLGAMTLTLTPWAGYVIEAVLGFFLSTVVLSTAVAGR
                     AGNLAPLAIGVTLIFNIVMGGPLTGAAFNPARALGPMVATGNFSDAWLYLTAPIVGAI
                     VAAVLHAGLARLLSQQPPATSEPANIARTPAE"
     gene            complement(1826..>2783)
                     /locus_tag="VHX39_30255"
     CDS             complement(1826..>2783)
                     /locus_tag="VHX39_30255"
                     /EC_number="1.11.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004096 - catalase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HEX3995476.1"
                     /translation="EALHQVTVVMSDRGIPKSFRNMHLFGSHTFSMINAADERVWVKF
                     HFRSQQRIENLTDAEAAALVAGDRESHGRDLLNAIEAGDFPRWTLFIQVMTEAQAKTH
                     KHNPFDLTKVWPKAEYPLIEVGVMELNRYPDNYFAEVEQAAFSPANIVPGIGFSPDKM
                     LQGRLFSYGDTQRYRLGINFNHIPVNAPKCPFQSYHRDGKMRTDGNLGDTLTFNPNSA
                     GLWDNQPDFAEPPMPIEGDAAHWDHRVDDDHWEQPGNLFRKMTPAQQQQLFENTARAM
                     GDARLHIKQRHIDNCTRADPAYGAGVAKALGLKFKPRTIAAE"
BASE COUNT          517 a          848 c          919 g          499 t
ORIGIN      
        1 cgcgaggcgg tgttgcggcg cttctaccgc tccgacaaga tccgaaatac gccaggtgtc
       61 ggccttggtc tcagtctggt ggctgcgatc gtaaagttgc acggcttccg tctcgcgatc
      121 cgcactggcc caggcggcca gctggcgatg atttgtcccg acaggcagac gtgaaaagcg
      181 caaacccggc tcgccagggg aacggcgcgc cgtcgtggcg tagggtgaga ttacagggat
      241 cgtgcagcgc cgaggctttc ctccagcagc gaccgtctgc gcacgctgct caatagcctg
      301 gttatccttt ccgagcggga gatcgagttc ccgccatacg gaaatcatcg cgtcggccaa
      361 ctgttggatc agccggatgt catgcgcggg ggttggagtg atccgcaatc gttcggtgcc
      421 cctggcaacc gtcggagacg tcgggcgtgg agcgcgccgc ctggcacacc cggcggcacg
      481 cacgccttcg atcatcgaat tatggttgag cgcatcggac aagatcaggc aatccggcag
      541 gagccgcgcg atcgtcgcga tgcctgtatg gttggacacg tagcccgacg tgaaaaccag
      601 cgccgcttcc ttgccatgca ggtcggcaag ctcggcctcc agttggacca gtgcccgatt
      661 tgtaccggag atattgcgcg tcccgcccgc gccggcgccc atcgtgcgcg cggcagcgca
      721 catcgcctct atcacatctg gatgctggcc catcccgaga tgtcgttaga gcaccagaca
      781 acgacatctc gttggccgct cgggctgttc cagagtgcat gagggaactg tccggccttg
      841 cgctccagat cggcgaacac gcgatagcga cgctcccgct tcagggcagc gatggtggac
      901 tgaaagctcg cgttataatc gaacattgcc tggaaatccc tcgtaatgga actcattcgg
      961 cgggcgtccg ggcgatgttg gccggttcgg acgtcgccgg cggttgctgg gagagcagcc
     1021 gggcgaggcc cgcgtgcagg acggcagcga cgatggcgcc gacgatcggg gccgtgagat
     1081 acagccaggc atcgctgaaa ttgcctgttg cgaccatcgg gccgagcgcg cgggccggat
     1141 tgaaggcggc gccggtgagg ggacccccca tgacgatgtt gaagatcagg gtcacgccga
     1201 tcgccaaagg cgccaggttg ccggcgcgcc ccgcaacggc cgtactgagc acgaccgtgg
     1261 acaggaaaaa gccgagcacc gcctcaatga cataacccgc ccacggtgtg agcgtgaggg
     1321 tcatcgcgcc caatccgaga ttgtgcgcaa ggtcgggcgt acccaggcca gtccccgcgc
     1381 tgcccagcac ggcccgcaac aaaaaggcac caaggatacc gccggcgaac tggcttacga
     1441 cgtatcccgc ggcttcgccg gcccgcatgg cgccggccgc aagcacggca atcgtgacgg
     1501 agggattgaa atggcccccc gatacggtgc cataggcgaa ggcaaaggcc atgaccgtca
     1561 aaccgtgggc gaaggcaatc gcggcgacac ccggcaaacc ggcgctgctg ccgatcacgg
     1621 cggtggcgcc cgcgccgatg aatatgagcg cgaatgtccc gacgaattct gcgagcaact
     1681 tggcgggtgc aatctggttc gacatcgttc actccaaaga tgagactgac acccggagtg
     1741 atcaggccgc gccggggagc agtatgtcgt ttggggacgg ctggcggcgt ggctcactgc
     1801 cgccagccgg caaagcgagc cgggtctact ccgcggcaat tgtccgcggt ttgaacttga
     1861 ggcccagcgc cttcgcgaca ccggcgccat aggccggatc cgcgcgggtg caattgtcga
     1921 tgtgccgctg cttgatgtgc agcctggcgt cgcccatcgc gcgggccgta ttttcgaaca
     1981 gctgctgctg ctgtgctggc gtcatcttcc ggaacagatt gccgggctgc tcccaatggt
     2041 catcgtcgac acggtggtcc cagtgcgccg catcgccctc gatcggcatc ggcggttcgg
     2101 cgaaatcggg ctggttgtcc caaagccctg cgctgttggg gttgaaagtc agcgtgtctc
     2161 ccaggttgcc gtcggtgcgc atcttgccgt cacgatggta gctttggaac gggcatttcg
     2221 gcgcgttgac cgggatatgg ttgaagttga tgccaagccg gtagcgttgg gtgtcgccat
     2281 aggagaacag ccgcccctgc agcatcttgt cgggagaaaa cccgatgcca ggcacgatat
     2341 tggcgggaga aaaggcggcc tgctccactt ccgcgaaata gttatccggg taacgattga
     2401 gctccatcac accgacctcg atcagcggat actccgcctt cggccagacc ttggtcagat
     2461 cgaagggatt atgcttatga gttttcgcct gagcctccgt catcacctga atgaacaggg
     2521 tccagcgcgg gaagtcgccg gcctcgatgg cgttgagcag gtcgcggccg tggctttcgc
     2581 gatctccggc aacgagggcc gcggcctcgg cgtcggtgag gttttcgatg cgttgctggg
     2641 aacggaagtg gaacttgacc cagacgcgct catcggccgc gttgatcatc gagaaggtgt
     2701 gactgccgaa caggtgcatg ttgcggaagc tcttcgggat gccgcgatcg gacataacaa
     2761 cggtgacctg atgcaacgcc tcc
//
LOCUS       DATAVD010001579         2694 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2943251, whole genome shotgun sequence.
ACCESSION   DATAVD010001579 DATAVD010000000
VERSION     DATAVD010001579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2694
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2943251"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..266)
                     /locus_tag="VHX39_30260"
     CDS             complement(<1..266)
                     /locus_tag="VHX39_30260"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3995477.1"
                     /translation="MLLQKLHHVAYRCTNAAETVDFYTKFLGLELVHALTNDRLPSTG
                     VFAPHIHIFFAMADGSFIAFFEVPLADAAQPDKTGAAWAQHLAL"
     gene            complement(284..1456)
                     /locus_tag="VHX39_30265"
     CDS             complement(284..1456)
                     /locus_tag="VHX39_30265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995478.1"
                     /translation="MTNSPYEWDRVPAIVRFADNAKFAETYGFAASSGEIALEGQFLL
                     PRNKPSETLYLFMHPSGLLHMLPMPAAVASAGLHVLCAGSRYPKNDSGLIMEKVALDM
                     GAWVRDARRRGYTKVVLVGWSGGGSLSLFYQAEAESPSIRTTTAGDPVDLVAAELSPA
                     DGVIFIAAHLSRAETLTQWLDPSVLDEADPDRRDPEFDIYDPACPHQPPYSSEFVARF
                     RAAQIARSRRITAWCEDMLTRLKSPEVERCFVVHRTMCDVRWFDPAIDPNGRPVGQCY
                     MGDPRTVNVSPAGLARYSSLRSWLSQWSYDRSQAKGSVNAARIRRTPVLQIENQADDA
                     VPASHNPTIRAALATPDKEYVRIEGASHYYKGQPAQMAECLAALLDWSVRKGLLTP"
     gene            complement(1590..>2694)
                     /locus_tag="VHX39_30270"
     CDS             complement(1590..>2694)
                     /locus_tag="VHX39_30270"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3995479.1"
                     /translation="DLSLTPSQILIRDSVRSFVQRHVPRAELVRQAKEGQTWDPGWFD
                     QFRDAGWTGALVSSAFGGLELDPLSVALIFEELGRGAVPGPLLASSVIAVGLLQACQP
                     TEQRDAALASIADGGTILIPALRKPESSWKGVAATATALTKNGGSWALTGSKVFVPFA
                     DAATHFLVTVTIPGDEMPALAIVPAGSNGITTRFLPGFIQANHEVNFNDVAVSDIVRC
                     GETSFDDALSIARVVTAAYQVGGMLEMLDMSVAHSNTRIQFGTPIGRFQRVQDHIIRL
                     LNAMDAARWATYEAAWAIEAGRNGVGRSYLAASTASDSYIEAANAAHEVHAAIGSDPR
                     YGLTLYTRISRTMYELLGPPSWQRRQMADALDW"
BASE COUNT          521 a          815 c          834 g          524 t
ORIGIN      
        1 tccagtgcca gatgctgcgc ccaggcggcg ccggtcttgt ctggttgtgc ggcgtcggcc
       61 aatggcacct caaagaaggc gatgaagctg ccgtctgcca tggcgaaaaa gatgtggatg
      121 tgcggcgcaa agaccccagt cgacggcaag cggtcgttgg tcagcgcatg cacaagctcc
      181 agtccgagaa atttcgtata aaagtccact gtctcagcgg cattcgtgca gcgataggcg
      241 acgtggtgaa gtttctgcaa caacatggcg gtttcctttc gacttatggt gtgagcagtc
      301 ccttgcgcac gctccagtcc agtagcgcgg cgagacattc tgccatttgg gccggttgcc
      361 ccttgtagta atgtgaggcg ccttcgatgc ggacatattc cttgtccggc gttgccagcg
      421 cggcacggat tgtcggattg tgcgaggctg gcactgcatc gtcagcctgg ttctcgatct
      481 gcaacacagg cgttcgacga atgcgcgccg cgttgaccga tcctttggcc tgcgaacgat
      541 cgtagctcca ttgcgacaac caggagcgca acgaggaata gcgggccagt ccggcgggcg
      601 agacgttgac ggtgcgcgga tcgcccatat agcactggcc gaccggcctg ccgttcggat
      661 cgatagcggg atcaaaccag cgcacgtcgc acatcgtgcg gtgcacaaca aagcaacgtt
      721 ccacctcggg cgatttcagc cgggtcaaca tatcctcgca ccaggctgtg atgcgccggc
      781 tgcgggcgat ctgggctgca cggaagcgag cgacaaactc cgagctgtaa ggcggttgat
      841 gcgggcaggc cggatcgtag atgtcgaatt ccggatcgcg gcggtcggga tccgcctcgt
      901 ccaataccga cgggtcgagc cattgggtca gggtttcagc ccgcgataag tgcgcggcga
      961 tgaaaatcac tccgtcggcc gggctcagtt cagccgcgac cagatcgact gggtcgccgg
     1021 cggtggtggt acggatcgaa ggtgactcgg cctcggcctg atagaacaac gacaatgagc
     1081 cgccgcccga ccaacccacc aggacaacct tggtgtaccc gcggcggcgg gcgtcacgta
     1141 cccaggcgcc catgtccagc gcaactttct ccatgatcag gccgctgtcg ttctttgggt
     1201 agcggctgcc ggcgcacagc acatgcagtc cggcggaggc cactgctgcc ggcatcggta
     1261 acatgtgcag caatccgctt gggtgcatga acagatagag cgtttcggac ggtttgttgc
     1321 gtggcaacag gaactggcct tccagcgcga tttcgcctga cgacgcggcg aaaccatacg
     1381 tctccgcgaa cttcgcgtta tcagcgaaac gaacgattgc cggcactcga tcccattcgt
     1441 aaggcgagtt cgtcataacc ctttctcccc ggaccaggta ctcgtgatgg tcggtgccac
     1501 gttatttcgc aatgctgcac cgttgatcgg acgcagtcct ctggtctgct gtcgcgctgc
     1561 cggatttacc gtgcctattt aaagcagtct taccagtcca acgcatccgc catttgccgc
     1621 cgctgccagg agggaggccc cagcagttcg tacatcgtcc tggaaatccg tgtgtacaga
     1681 gtaagaccat accggggatc gctgccgatc gcggcgtgta cttcgtgcgc cgcattagcc
     1741 gcctcgatat agctgtcgct ggctgtcgag gccgccaaat agctgcggcc gacaccgttc
     1801 cggccggctt cgatggccca ggcagcctcg taggtcgccc atcgcgcggc gtccatggca
     1861 ttgagcagac ggatgatgtg gtcctgcacc cgctggaagc ggccgatcgg cgtgccgaat
     1921 tgaatgcggg tgttgctgtg ggcgaccgac atgtcgagca tttcaagcat accgccaacc
     1981 tgataggcgg ccgttaccac gcgagcgatt gacagagcgt cgtcgaacga tgtctcaccg
     2041 catcgaacga tgtccgagac ggcgacatcg ttgaaattga cctcgtggtt cgcctgaatg
     2101 aaaccgggca agaacctggt tgtgatcccg ttgctgccgg ccggaacgat cgccaatgcg
     2161 ggcatttcgt cgcccggtat cgtgacggtc accaggaagt gggttgccgc gtccgcgaaa
     2221 ggcacgaaca ctttggatcc cgtcagagcc caggacccac cgttcttcgt cagcgccgtt
     2281 gcggttgccg cgacgccttt ccacgacgat tctggtttcc gaagtgccgg tatcaggatc
     2341 gttccaccgt cggcgattga ggccagcgcg gcatcacgct gttcggtcgg ttgacaggct
     2401 tgcagcagac cgacggcaat cacgctcgac gcgagcaacg ggcctggcac tgcgccgcgg
     2461 cccagttcct cgaagatcaa ggcgacgctg agcggatcca gttccaggcc gccgaatgcg
     2521 gacgacacca gagcaccagt ccagccggca tctcgaaatt gatcgaacca accgggatcc
     2581 caggtctggc cctccttggc ctgacgaacc agttccgctc tgggaacgtg tcgttgaaca
     2641 aacgagcgca cgctgtcgcg gatcaatatc tgcgacggag ttaatgagag gtcc
//
LOCUS       DATAVD010001580         2276 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1823873, whole genome shotgun sequence.
ACCESSION   DATAVD010001580 DATAVD010000000
VERSION     DATAVD010001580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1823873"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..634)
                     /locus_tag="VHX39_30275"
     CDS             complement(<1..634)
                     /locus_tag="VHX39_30275"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX3995480.1"
                     /translation="MLPIGSMRTRMIRVQLCVIAVLLALGWPGAFAQSSYPAQTITLI
                     VPFAAGGPTDVVARVLQGSMSRALAQTIVIENVVGAGGTTAATRAMRAAPDGYTIMLG
                     HMGTHAAVVALYPKLAYNPATDFAPIGLVVQMPVLAIARNGIPARDLKEFIAYANQHA
                     GELTMAHAGLGSVSYVSCELFNSILGLNPKRLGYQGSEPAMAALLAGKADY"
     gene            complement(733..>2276)
                     /locus_tag="VHX39_30280"
     CDS             complement(733..>2276)
                     /locus_tag="VHX39_30280"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3995481.1"
                     /translation="VSLAFAATAAPAADLRIGVASEVTTLDPHFFHLTSNTEIHKAIY
                     SGLVTQDANMKVVPDLAVSWRTVDDTHWEFKLRPGVTFQDGSPFTADDVVFTYTRARN
                     VPNSPGSFLQYLKHVTATTASDPLTVVVQTDAPDPILLNELQNVWIVSRKNGAGATTS
                     DYNSGKAAIGTGPYRLGDWVHGDHITLIRFDGYYGTKPDWDKVTYRAIVNDAARTAAL
                     LSGDVDLIASVPGNDLANVRANKALTVSTMLSNRCYFWTVDVGREVSPMVTDTDGKPM
                     TKNPLQDVRVRRAMSKALDRAAIVSRVMLGQGEPTAQFMPDGVPGTDPNLKPDAFDLP
                     GAKQLLAEAGYPNGFGLTIASTNDRYINDAAMAQAVAQMWTRLGLKIVVSTFPKAVYF
                     PRAVKLDFSVLLSGNSTDTSEPLSQLTYLLGTFDPGRGIGAGNYGRYSSAALDKLLAA
                     ASGTLDDGKRAALIAQAYDLALGQDVATIPMLFQITAWGMRKDIAYGGFPQEATVAAL
                     AHQVK"
BASE COUNT          438 a          687 c          711 g          440 t
ORIGIN      
        1 tgtagtctgc tttgcctgcc agcaacgctg ccatggccgg ttccgagccc tgatacccga
       61 ggcgcttcgg gttcaggccg aggatcgaat tgaacaactc gcagctgaca taggacaccg
      121 acccgaggcc ggcatgggcc atggtcagtt cgccggcatg ctggttcgca taggcaatga
      181 actccttcag gtcgcgcgcc ggaatgccgt tccgtgcaat cgccagcacg ggcatttgca
      241 ccacgaggcc aatcggtgcg aaatccgtcg ccgggttgta tgccagcttc ggatagagcg
      301 cgaccacagc ggcgtgcgtt cccatgtgac ccagcatgat cgtatagccg tccggtgcgg
      361 ctcgcatcgc tcgggtcgca gcagtcgttc cgcctgcccc cacaacattt tcaatcacaa
      421 tcgtctgggc cagcgcgcgc gacatgctgc cctgcaacac gcgtgcaacg acatcggtcg
      481 gcccgccggc agcaaacggc acgatcaaag taatcgtctg cgcgggatag gaagactgcg
      541 caaaagcgcc aggccaaccg agggccagca gcacggcaat gacgcagagt tgaacccgga
      601 tcatgcgggt acgcattgaa ccaatgggca gcatcggaca tccttggcag aagcctgctg
      661 gcttgcctgg tcgtcatcat gccggagcgg tgttaaggaa ccgttaaagc cgacctcagg
      721 cagcctggta gcttacttca cctgatgcgc cagggcggcc accgtcgcct cctgcgggaa
      781 gccgccataa gcgatatctt tgcgcatccc ccaggcggtg atctgaaaca gcatcggaat
      841 cgttgccacg tcctgcccca gagccagatc atacgcctga gcgatcaacg ccgcgcgttt
      901 gccgtcatcc aatgtccctg aggcggcggc cagcaacttg tccagtgctg cactggaata
      961 acgcccgtag ttgccggcgc cgatccctct gcccggatca aaggtgccga gcagataggt
     1021 cagttgcgac agcggctcac tggtgtcggt ggaattgccg ctgagcagca cactgaaatc
     1081 gagtttcacg gcgcgcggaa aatacaccgc tttgggaaat gtgctgacaa caatcttcaa
     1141 gcccaaccga gtccacatct gcgccaccgc ctgggccatt gcagcgtcgt tgatgtaacg
     1201 atcgttggtg gaggcgatcg tcaggccaaa gccgttcgga tagcccgcct cggccagcag
     1261 ctgtttcgct cccggcagat cgaatgcgtc cggtttcagg ttcgggtcgg tgcctggcac
     1321 gccatccggc atgaactgtg ccgtgggctc gccctggccc agcatgacgc gggatacaat
     1381 ggcggcgcgg tcgagggctt tcgacatggc ccgtcgtacc cggacatctt gcaacggatt
     1441 tttggtcatc ggcttaccgt cggtatcggt gaccatggga gaaacttctc ggccgacatc
     1501 gacggtccag aagtagcaac ggttgctgag catggtcgat acggtcagcg ccttgttggc
     1561 acggacattg gccagatcgt tgccgggcac cgacgcaatc agatcgacgt cgccacttag
     1621 cagagccgcc gtgcgggcgg catcgttgac gatcgcgcgg taggtgacct tgtcccagtc
     1681 cggtttggta ccgtaataac cgtcaaaccg tatcagcgtg atgtgatcgc cgtgcaccca
     1741 gtcgccaagc cgatacggcc cagtaccgat cgccgccttg ccggagttgt agtcggatgt
     1801 ggtggcgccc gctccgttct tgcgcgagac gatccaaacg ttctgcaact cgttcagcaa
     1861 gatcgggtcc ggagcgtcgg tttgcaccac caccgtcagc gggtcgctcg ccgtcgttgc
     1921 tgtcacgtgc ttcagatatt gcaagaagct gcctggactg ttcggcacgt tgcgggctct
     1981 tgtgtaggtg aagaccacat cgtccgcggt gaacggcgag ccgtcctgga acgtgacgcc
     2041 aggccgcagt ttgaactccc aatgcgtgtc gtcgacggtg cgccaactga cggcaaggtc
     2101 gggcacgacc ttcatgttgg catcctgcgt gacgaggccg ctgtaaatgg ctttgtggat
     2161 ctcggtattc gaggtcaggt ggaagaagtg tgggtcgagg gtggtcactt cggaggcaac
     2221 gccgatgcgc agatcggcag cgggtgcagc ggtggcggcg aatgcgaggc tgacgg
//
LOCUS       DATAVD010001581         2696 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2197509, whole genome shotgun sequence.
ACCESSION   DATAVD010001581 DATAVD010000000
VERSION     DATAVD010001581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2696
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2197509"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VHX39_30285"
     CDS             <1..186
                     /locus_tag="VHX39_30285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995482.1"
                     /translation="AGGPGGKASWWGSGQRPGAFTLLLAATLALAACGKVGPPQPVGP
                     PDKVIWPHTYPTPHPAP"
     gene            208..2283
                     /gene="ligA"
                     /locus_tag="VHX39_30290"
     CDS             208..2283
                     /gene="ligA"
                     /locus_tag="VHX39_30290"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEX3995483.1"
                     /translation="MKPVEDLTEAEASAELERLAAEITHHDRAYHERDAPEISDAEYD
                     ALRRRNMAIEARFPSLIRADSPSHRVGAAPESGFAKLRHRVPMLSLDNAFDTSDFADF
                     TARAHRFLGSAAAIDFVAEPKIDGLSINLTYEDGRFVRGATRGDGTEGEDVTANLRTM
                     KSVPVRLHGKAPALIEIRGEVFITKADFLALNKRQADAGERLFANPRNAAAGGLRQLD
                     PRITATRPLSLFAYAQGESSAAVADTHWDYLHQLEQWGFSVNPLSRQVRDAAEAEAFQ
                     NEMALLRSGLDYDIDGVVYKINDLGLQRRLGFVGRAPRWAIAWKFPAEQATTVLLGIR
                     IQVGRTGALTPVAELQPVNVGGVLVARATLHNEDEIARKDIRVGDTVVLQRAGDVIPQ
                     IVSVVTERRPADTTPFAYPEVCPVCGSHAVRPPGEVVRRCTGGLVCAAQRVERLIHFV
                     SRAAFDIDGLGEKSIREFYEAGWLHSPADLFRLPEREAEIAGREGWGKLSARNLSRAI
                     EAKRRISLERLIYALGIRRIGEANARLLARHYGSFSEWRAGMIAATVVGSEARSTLGD
                     IVGIGPAIAEELADFFDEPRNVATLDELAAQLTVEAAAAPEATDSQVAGKTIVFTGTL
                     ETMTRPEAKARAEALGAKVTESVSKKTDLVVVGADAGSKARKAQELGVKTVSETEWRE
                     LAGFAVADG"
     gene            complement(2294..>2696)
                     /locus_tag="VHX39_30295"
     CDS             complement(2294..>2696)
                     /locus_tag="VHX39_30295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995484.1"
                     /translation="PQDQMAVAVNRFDRFEWPGGADASLQTIRAAVIEAMASVQGTIN
                     RVRPGILVLSTGAIEGTLDRLFVDSIVAALGSHGKRHRGLAAVSAILPKVLITGRHRE
                     VRFGYSFYPVPNRSHSIGQSVRIGSRPDYSG"
BASE COUNT          503 a          848 c          863 g          482 t
ORIGIN      
        1 gctggaggtc caggaggcaa agcctcctgg tggggttcgg ggcaacgccc cggcgccttc
       61 accctgctcc tggccgcgac actcgccctc gccgcctgcg gcaaggttgg cccgccgcag
      121 cccgttggtc cgccggacaa ggtgatctgg ccgcacacct atccgacacc gcatcctgcg
      181 ccctgatctg gagatacgga gaccgacatg aaaccggtcg aagacctgac ggaagccgaa
      241 gccagtgccg aactggaacg tctcgccgcc gagatcacgc atcacgaccg cgcctatcac
      301 gagcgtgacg ctccggaaat ttccgatgcc gagtacgacg cgttacgtcg gcgcaacatg
      361 gcgatcgagg cgcgatttcc atcgctgatc cgcgccgatt cgccatcgca ccgggttggt
      421 gctgcgccgg agagtgggtt cgccaaattg cgccatcggg tgccgatgct gtcgctcgac
      481 aacgctttcg atacctcgga ctttgccgac ttcacagcgc gcgcccaccg atttctcggt
      541 tccgccgcgg cgatcgattt cgtcgctgaa ccaaaaatcg atggcctgtc gatcaatctg
      601 acttacgaag acggccgttt cgtgcgtgga gcgacccgcg gcgacggcac cgaaggcgag
      661 gacgtcaccg ccaatctgcg caccatgaaa tcggtgcccg tgcggttgca tggcaaagcc
      721 ccggcgttga tcgaaatccg tggcgaggtg ttcatcacca aggcggattt cctggcgttg
      781 aacaaacgtc aggcggacgc gggggaacgg ctgttcgcca accctcgcaa tgccgccgcg
      841 ggcgggctac ggcagctcga tccgcgcatc accgcgacac ggccattgtc gctgttcgct
      901 tatgcgcaag gtgagtccag cgcagcggtg gcagacacgc actgggatta tctgcatcag
      961 ctcgaacagt ggggcttctc ggtcaatccg ctgtcccgcc aggtgcgcga tgcggccgag
     1021 gcggaggcgt tccagaacga aatggcgctg ttacgatccg gcctcgacta cgatatcgac
     1081 ggcgtggtct ataagatcaa cgatctgggt ctgcaacgcc ggctcggctt cgtcggtcgc
     1141 gcgccgcgtt gggcgattgc ctggaaattc cccgccgagc aggcaaccac cgtgttgttg
     1201 ggcattcgca tccaggttgg ccgcaccggc gctttgacgc cggttgccga gttgcaaccg
     1261 gtcaatgtcg gcggcgtgct ggtcgcccgt gccacgttgc ataacgaaga cgaaatcgct
     1321 cgcaaggaca ttcgcgtcgg cgataccgtc gtgctgcagc gcgccggtga cgtgatcccg
     1381 cagattgttt cggtggtaac ggaacgccgg ccggcggata caacgccatt tgcctatccg
     1441 gaagtctgcc ctgtgtgcgg cagtcatgcg gtgcggcctc ccggagaagt ggtgcggcgt
     1501 tgcaccggtg gtttggtttg cgctgcccaa cgcgtcgagc ggctgatcca tttcgtgtcg
     1561 cgtgccgcat tcgacatcga cggactcggc gaaaaatcga tccgcgagtt ttacgaagcc
     1621 ggctggctgc acagcccagc ggatttgttt cgactgccgg aacgcgaggc ggagattgcc
     1681 ggccgggagg gttggggcaa actctcggcg cgcaatttgt cccgcgcgat cgaggcaaag
     1741 cggcgcattt cactggaacg gttgatttat gcgctcggca tccgccggat tggcgaggcc
     1801 aacgctcgac tcctggcgcg gcattatggt tcgttttcgg aatggcgcgc cggcatgata
     1861 gcggccactg tagtcggctc cgaggcacgc agcacgcttg gcgacatcgt cggcattggg
     1921 cccgcgatcg ccgaggagct ggcagatttc ttcgacgaac cgcgcaatgt cgcgactttg
     1981 gacgaactgg cggcgcaact gacggtcgaa gcggctgcgg cgcccgaagc gaccgacagt
     2041 caggtcgccg gcaaaacgat cgtgtttacc ggcacactgg aaaccatgac gcgtccggaa
     2101 gccaaggcgc gcgccgaggc tctcggtgca aaagtcactg aaagcgtctc aaagaaaacc
     2161 gatctcgtgg tggtcggtgc cgacgccggt tcgaaagcgc gcaaagccca ggaactgggg
     2221 gtgaagacgg tttcggaaac cgaatggcgg gaactcgcgg gattcgcggt tgcagacggg
     2281 tgattatcgc ccgtcacccg gaataatccg gccgcgagcc gatgcgtacc gattgaccga
     2341 tcgaatggct acgattgggc accgggtaaa acgaatagcc aaaccgcacc tcgcgatgcc
     2401 ggcccgtgat cagcactttc ggcaaaatcg ccgacaccgc cgcgagcccg cgatgacgtt
     2461 tgccatgcga accaagtgcg gcgacgatgc tgtcgacaaa caaccgatcg agcgtgccct
     2521 caatggcgcc ggtcgacagc accagtatgc cgggccgcac gcgattgatc gtgccttgca
     2581 ctgatgccat ggcctcgatt accgctgccc tgatcgtctg cagcgaggca tccgccccgc
     2641 ccggccactc gaaccggtca aaccggttca ccgcgactgc catctggtcc tgcggc
//
LOCUS       DATAVD010001582         1555 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_896861, whole genome shotgun sequence.
ACCESSION   DATAVD010001582 DATAVD010000000
VERSION     DATAVD010001582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_896861"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1272
                     /gene="mtnA"
                     /locus_tag="VHX39_30300"
     CDS             <1..1272
                     /gene="mtnA"
                     /locus_tag="VHX39_30300"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF004326.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HEX3995485.1"
                     /translation="IMRARPTAVNLEWAVRRVLSKVPEGYAAALDEAMAILAQDALVN
                     RAAAENAADFVLQVCPRRPLRVLTHCNTGRLATGAFGTALGTIQVLADRGAIGNVLVG
                     ETRPLLQGARLTSWELGEAGIPHTLAVDSAAAWAMRRDQVDCVLVGADRIVANGDVAN
                     KIGTYALALAARRHRIPFIVVAPESTRDLALASGRDIAVEQRDADEVRAFMGSPVAPA
                     GTPVFNPAFDITEADLITAVVTEKGVLSLDANLIERILARTVVYPDFPKPGTNFRDLA
                     GLYADPQLFAESVTAISREFNHNVDRVVAIDARGLAVGAALAGELRLPLTLIRKPGKL
                     PGETGSYSYQLEYGTDELHVQKGAIAVGERVVIADDILATGGTMIAAIELLRGQGAAI
                     AGVAVVMSLTGLGGRERLADQRLVSLVEVPA"
     gene            1269..>1555
                     /locus_tag="VHX39_30305"
     CDS             1269..>1555
                     /locus_tag="VHX39_30305"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX3995486.1"
                     /translation="MTRHAAARPDEIAAMARVFYRQGWMPGTAGNISALDGADTALIT
                     GSGIHKGDLAARDLVRVRIDDATSISPNGVRPSAETAIHMAVYRATNAEAVV"
BASE COUNT          270 a          490 c          530 g          265 t
ORIGIN      
        1 ataatgcggg cccgcccgac cgccgtcaat ctggaatggg ctgttcgccg ggttctcagc
       61 aaagtgcctg agggctacgc tgccgctctc gacgaagcga tggcgatcct ggcgcaggac
      121 gcactggtga accgggcggc agccgagaat gccgcagact ttgtcctgca ggtgtgcccg
      181 aggcgcccac tgcgggtgtt gactcactgc aacacgggtc ggctggccac gggcgccttc
      241 gggaccgcac tggggacgat tcaggtgctg gccgatcgcg gagcgatcgg gaacgtgctg
      301 gtgggagaga ctcgcccgtt gctgcaaggt gcccggctca cgtcctggga actcggtgag
      361 gcgggcattc cgcacacgct agcggtcgac tccgcggcgg cctgggccat gcgtagggac
      421 caggtggact gcgtgctggt tggcgcggac aggatcgtgg ccaatggcga tgtcgccaac
      481 aagatcggaa cgtacgcgct ggcactggcc gcgcggcggc accggatccc gttcatcgtg
      541 gtcgcgcccg agtcaacgcg cgatctcgcc ttggcgtccg gtcgcgatat cgccgtggag
      601 caacgcgacg ctgacgaagt gcgcgcattc atggggagcc cggtagctcc ggccggaacc
      661 ccggttttca accctgcctt cgatattacc gaggctgatc tgatcaccgc ggtcgtaacc
      721 gagaaaggcg tcctttccct ggacgccaac ctcatagaac gcatcctcgc gcggaccgtg
      781 gtctatcccg acttcccgaa accggggacc aacttccggg atttggctgg gctctacgcc
      841 gatccgcagt tgttcgctga gtcggtcacc gcgatttccc gagagttcaa tcacaacgta
      901 gaccgggtcg tcgcgatcga cgcgcgtggg cttgcggttg gcgcggcact agctggcgag
      961 ctgcggctgc cgctcaccct catcagaaag cccgggaaac tgcccggcga aaccggctcg
     1021 tactcctatc aactggagta cggcacggat gagctgcacg tgcaaaaagg ggcaatcgcc
     1081 gtcggtgagc gagttgtcat cgccgatgac atcttggcta ctgggggcac gatgattgcc
     1141 gccatcgaac ttctccgcgg ccagggcgcg gcgatagccg gcgttgcggt agtgatgtcg
     1201 cttaccgggc tcggcgggcg cgaacgacta gccgaccaac ggctggtgtc cttggtcgag
     1261 gtcccggcat gactaggcac gccgccgcgc ggccggacga gatcgcggcg atggcgaggg
     1321 tcttctaccg ccaggggtgg atgccgggaa ccgcgggaaa catctcggca cttgacggag
     1381 ccgatacggc cctgattacc ggcagcggca tccacaaggg cgacctggcc gcacgggacc
     1441 ttgtccgcgt aagaattgac gacgcgacta gtatctcgcc caatggcgtg cggccatcgg
     1501 ccgagacggc cattcacatg gccgtgtacc gcgccaccaa cgcggaagcc gtggt
//
LOCUS       DATAVD010001583         2995 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_522362, whole genome shotgun sequence.
ACCESSION   DATAVD010001583 DATAVD010000000
VERSION     DATAVD010001583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2995
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_522362"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..481)
                     /locus_tag="VHX39_30310"
     CDS             complement(<1..481)
                     /locus_tag="VHX39_30310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995487.1"
                     /translation="MSRKYRTLIMGASYGSLLATKLGLAGHSSHLICLPAEADLINAE
                     GALVRMPVRGRPGLVEVNSRDLPGQLTAGGPAGVRPQDFDLVVLAMQEPQYRSPGVRE
                     LLDAVATSRVPCMSIMNMPPLPYLKRIPEIDAAAIRVCYTDASVWDSFDPKTITLCSP
                     "
     gene            complement(657..1496)
                     /locus_tag="VHX39_30315"
     CDS             complement(657..1496)
                     /locus_tag="VHX39_30315"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3995488.1"
                     /translation="MRRLLIICLVGLVALPAFAAERWQTLPPTPAPIATQRTGLARVN
                     GIGIHYAIYGHGSPVIFLHGGLANTDYWGKQAPAVAAHHMVILMDSRGHGRSTRDARP
                     YGYDLMADDVVALLDYLKISKADVVGWSDGGILGIDLALRHKDRVGKVFAFAANTVTS
                     GVIDGVEKNPTFAAYIVRAGQEYAKQSATPGEYQAFVDQISKMWAEQPNWTDAQLKSI
                     DTPVLIVDGDHDEAIKREHTEYIAATIPHAGLLILPNVSHFAFLQDPAQFNFAILHFL
                     GDE"
     gene            1799..>2995
                     /gene="hydA"
                     /locus_tag="VHX39_30320"
     CDS             1799..>2995
                     /gene="hydA"
                     /locus_tag="VHX39_30320"
                     /EC_number="3.5.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004157 - dihydropyrimidinase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropyrimidinase"
                     /protein_id="HEX3995489.1"
                     /translation="MPAFDLIISGGTVATGSDVMICDVGIKAGQIVALGRDLGSAGRE
                     IDATGKLVLPGGIDSHVHLAQPSGPDIVQSDDFESGTRSAAFGGNTTVIPFCLQQRGE
                     GLRQAIKDYHAKADGQCFTDYGFHLIISDPTPTVLGQELPAAIGDGYSSFKVFMTYEG
                     LALTDEEILKVMTVARGTGALVMVHAENYDIIRHLTAKLESEGKIAPHFHATSRPIPA
                     EREATHRACTLAEIADVPLVIVHVSNGEAIEEIQRARARGVKVLAETCPQYLMLTAKD
                     LEGLNMEGAKYVCSPPPRDKPSQDACWAAIEQGIFEFYSSDHCPFRYNDERGKLVPKG
                     RTSFRWVPNGIPGVATRLPILFSEGVVKGRIDLNSFVAFTATNHAKIYGLYPRKGTIA
                     VGSDADI"
BASE COUNT          601 a          931 c          892 g          571 t
ORIGIN      
        1 cggggctgca cagggtaatc gtcttgggat cgaaactgtc ccaaaccgag gcgtcagtgt
       61 aacagacgcg gatcgcggcg gcgtcgatct ccggaatgcg cttcaggtag ggcagcggcg
      121 gcatattcat gatggacatg cagggcacgc gcgatgtcgc caccgcgtcg agcagctccc
      181 gcacgccagg cgaacgatat tgcggctcct gcatggccag cacgaccaga tcgaaatctt
      241 gcggcctgac ccctgccggt ccaccggcgg tcaactgacc cggcagatcg cgcgagttca
      301 cctccaccag cccaggacgt cccctgacgg gcatgcgcac gagggcacct tcggcgttga
      361 tcagatccgc ctcagccggc agacagataa gatgcgagga atggccggcc aatccgagct
      421 tggtggccag taacgatccg tacgatgcgc ccatgataag cgtgcgatat tttctggaca
      481 ttttctctct ccctccggcc catgcgcggt tgtcgccatg ggctggtgtc ctcggtttga
      541 cggcatcgat ggccgccttg tccgctatct caggacctta ttggcctcgc cgcaagtgaa
      601 atctttgtcg ggtcggctcg aagcaccccg gcgagcgggt tttcacaagt tggctcctat
      661 tcatccccga gaaaatgcag gatggcgaaa ttgaattgtg ccgggtcttg cagaaacgca
      721 aaatgactga cattcggcag gatcaacaaa ccggcgtgcg ggattgtcgc ggcgatatat
      781 tcggtatgtt cgcgcttgat cgcttcgtcg tgatcgccgt cgacgatcag caccggcgta
      841 tcgatcgatt tgagttgggc atcggtccag ttgggctgct ccgcccacat tttgctgatc
      901 tgatcgacga acgcctgata ctctccgggg gtcgccgatt gtttggcata ttcctggccg
      961 gcgcgcacga tataggcagc aaaggtcgga ttcttttcga cgccgtcgat gacgccggac
     1021 gttaccgtat tggccgcgaa ggcaaacacc ttgccgaccc gatccttgtg acgcagcgcg
     1081 agatcgatac cgagaatgcc gccgtcgctc caacccacaa cgtcggcttt ggagattttc
     1141 agatagtcca gcaacgccac gacatcatcg gccatcaggt catagccgta cggcctcgca
     1201 tcgcgcgtgc tgcggccgtg tccgcggctg tccatcagaa taaccatatg atgggccgcc
     1261 acggccggcg cctgcttgcc ccaatagtcg gtatttgcca ggccgccatg caggaaaatc
     1321 accggcgagc cgtgcccgta gatcgcgtaa tgaatgccga tcccattcac ccgagccagg
     1381 ccggtacgtt gggttgcgat tggcgccggc gttggcggta aggtctgcca ccgctcggcc
     1441 gcaaaggccg gcagcgccac gaggccgacg aggcatataa tcagcaatct gcgcatgggc
     1501 ttctcctgac ggtcgttcgc ggcctcacag ttccggaacc gcgacgccaa tcgtaagcgt
     1561 agcgcgcggt ccgagcggtc gcgactctgc tctcggcagc ttgacatcac gagcaaatcg
     1621 gcagtgccgg catacgcaac cgaaaccttg gtatttcgga tggaaacgct atcggtcggc
     1681 gatcgcatgg ccgccagcgg gctggacggc cactggagcg taacagccaa cgcggctaac
     1741 catggcccag taccctggac cacttgcgtc cggatcatgc agcaacggag cagaacccat
     1801 gcccgccttc gatctgatca taagcggtgg taccgtcgcc accggctcgg acgtcatgat
     1861 ctgcgatgtc ggcatcaaag ccggccagat tgttgcgctt ggccgcgacc ttggctcagc
     1921 cggccgcgag atcgacgcaa cgggcaaact ggtactgccg ggcggcatcg acagccacgt
     1981 ccacctcgcc caacccagcg ggcccgacat cgtgcaatcc gacgatttcg aaagcggcac
     2041 ccgctcggcg gcattcggcg gcaacacgac tgtgatcccg ttctgcctgc agcaacgcgg
     2101 cgaggggtta cgccaggcga tcaaagatta tcacgccaag gccgacggcc aatgtttcac
     2161 cgattacggc ttccacctga tcatttccga cccgacgcca acggttctgg gtcaggaact
     2221 gccggcagcg atcggcgacg gctattcatc attcaaagtg ttcatgacgt acgaaggtct
     2281 cgcactgacc gacgaggaaa tcctgaaagt catgactgtc gcgcggggca ccggcgcatt
     2341 ggtcatggtg catgcggaaa actacgacat cattcgccac ctgacggcaa agctggagtc
     2401 cgagggcaag attgccccgc attttcacgc cacctcgcgc cccattccgg cggagcgcga
     2461 ggccactcat cgcgcctgca ctctggccga gattgccgat gtgccgctgg tgatcgtgca
     2521 tgtctccaac ggcgaggcga tcgaggaaat ccagcgcgcg cgggcccgtg gcgtgaaagt
     2581 cctggcggaa acctgtccac aatatttaat gctgactgcc aaggatctcg aaggcctgaa
     2641 catggagggt gcgaaatacg tctgctcgcc gccgccgcgc gacaaaccca gtcaggacgc
     2701 ctgttgggcg gcgatcgaac aagggatttt tgaattttac tcgtccgatc actgcccgtt
     2761 tcggtataat gacgaacgcg gaaagctggt gccgaagggg cgcaccagtt tccgctgggt
     2821 gccgaacgga attcccggcg ttgcgacacg gctgccgatc ctgttttccg aaggcgtcgt
     2881 caagggccgg atcgatctca attcctttgt cgcgttcacc gcgaccaatc acgccaagat
     2941 ctacggtctc tatccgcgca agggaaccat cgcagtgggg tcggacgccg acata
//
LOCUS       DATAVD010001584         7384 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3499894, whole genome shotgun sequence.
ACCESSION   DATAVD010001584 DATAVD010000000
VERSION     DATAVD010001584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7384
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3499894"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1021
                     /locus_tag="VHX39_30325"
     CDS             <1..1021
                     /locus_tag="VHX39_30325"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HEX3995490.1"
                     /translation="EAPGGGMNWDYRYSWLRDSTFTLGALINAGYPDEALRWRDWLLR
                     AIAGSPEKMRTMYRVDGGRDLHERTIEGLSGYRYARPVRVGNAASEQFQLDVWGEVLD
                     SLRLADRAGLPTSRHAEVMRVKIVEHLASVWDQPDAGMWESRDALRHYTYSKAMAWVG
                     VDCFLRSPAATNADTALLTRLTELRRQIHQEVCREAWHSGLGTFTQYYGGTEPDASLL
                     LLPLVGFLPVEDPRMAATIDVIGRDLNDGGLIRRTRSGGDGAFIACSCWMVDCLSMQG
                     KSYAAASLLERVLDLRNDVGLLSEEYNVPGRHLSGNFPQALSHLAVVNSALGLCGPVL
                     QRGGG"
     gene            1180..2958
                     /locus_tag="VHX39_30330"
     CDS             1180..2958
                     /locus_tag="VHX39_30330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010512005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HEX3995491.1"
                     /translation="MNVSEFVWHRLTEWGVKRVFGYPGDGVGGLDVALERAKDKIQYI
                     QVRHEEMAAFMASAHAKFTGEVGVCYATSGPGAIHLLNGLYDAKMDHVPVVALVGQQA
                     RSALGAHYQQEVDLQSLFKDVAADFVALASVPTQIRHLIDRAMRIAANRRTVTCVILP
                     NDLQGLPYEDPPLVHGTTHTGVGYAGPALLPENDLLHDAASVLNAGKKVAMLVGAGAL
                     NATDEVIEVAERLQAGIAKALLGQAAVPDDLPFVTGSIGLLGTSPSWDMMQECDTLFM
                     VGSAFPYSEFLPKPGKARGVQIDIDGTRTSLRFPMEVNLIGDSAKTLRALLPLLVQKR
                     ADSWRRDIEKNVAKWWKTLEDRAMEPADPINPQRVFWELSKRLPDNCIMTGDSGSVAN
                     WYGRDIKMRRGMKGSLSGSLASLGAATPYAMAAKLAFPERTVIAFIGDGAMQMNGLNV
                     MITISKYWKEWSNPHLIVMVLNNRDLNQVTWEERVQLGEGKTESTQSIPDFAYHTYAE
                     LLGLRGIVVRNPESVGAAWDAALSADRPVILNIYTDPNVPPLPPHITLKDAKNFITMT
                     TSEPELGSVLKNTAREVLATVLPGKD"
     gene            2962..4065
                     /locus_tag="VHX39_30335"
     CDS             2962..4065
                     /locus_tag="VHX39_30335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEX3995492.1"
                     /translation="MTKNPPISSVHAHAYTVPTDLPETDGTLEWDSTTIVIVDIEAGG
                     RQGLGYSYTHASAATLINHTLAKIVGGQSALHPGACWRAMQRAVRNLGRSGLVATAIS
                     AVDIALWDLKAKLFDLPLASLLGGVRQVVPIYGSGGFTNYTNDQLADQLRDWVERDGC
                     RFVKMKIGTDPAQDPSRVAAAKAAIGAAELFVDANGAYTVKQAQHLAQEFAAGQDVRW
                     FEEPVSSDDLDGLRRVRDHVRSPMEVAAGEYGYDIDYFRRMLEAGAVDVQQADATRCG
                     GVTGFLHAATLCDAFHTDLSAHCAPALHLHLGCAAPRLRHLEWFHDHVRIERLFFDGA
                     PVPGNGVIAPDMSRAGLGLTLRQADASRFAATP"
     gene            4062..5120
                     /locus_tag="VHX39_30340"
     CDS             4062..5120
                     /locus_tag="VHX39_30340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019091885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995493.1"
                     /translation="MKRELAQEVPLGARSRVTSPVASRCRSLASKAASASSSQYNVAA
                     GLLALAVGLQLLPRARNAAAKSVVAGPPRSPSIDVSTSGRAGRRLNRAAGVIAASVLA
                     DSAIEHYRGSFHNKAMLAPLITASLSLAASGHGVTDRRTGPHWLRDCAYAAAGLTGLI
                     GTAFHIYNVGKRPGGVGWQNLFYGAPIGAPAALVLSGTMGFLAERVRDTPPGTVPTIA
                     GLPAGRVVAAAVSAGLLGTVGEAGLLHFRGAYQDPFMYLPVTVPPVAAALIGNAALGQ
                     TGIRRRATRLLLRLTAALGFAGSGFHIYGVGRGMGGWRNWRQNLLNGPPIPAPPSFTG
                     LALAGLAALGLMEDRPDD"
     gene            5113..5754
                     /locus_tag="VHX39_30345"
     CDS             5113..5754
                     /locus_tag="VHX39_30345"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019091884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HEX3995494.1"
                     /translation="MTDRYPGYDVLAKRWSQSWNRVTRAVIDRRLAVSREPRFFTMPE
                     WETLDAVCARIMPQSSDRPRIPLAAYVDAKIHDKREDGYRYAAMPAQGEAWKRGLAAL
                     DQEATDAHGLPFHRLPSETQDGLLRRMQQGDLRSAVWAGMPCKLFFEHRVIPDITHAY
                     YAHPSAWNEIGFGGPASPRGYVRMQLDRRDPWEAVEAQPGEEEQVRRDNAHVG"
     gene            5744..>7384
                     /locus_tag="VHX39_30350"
     CDS             5744..>7384
                     /locus_tag="VHX39_30350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX3995495.1"
                     /translation="MSDDPFAAPRATNGRAPDVFRHGSWVPMRQYDEDEAVDFVVIGT
                     GAGGGPLISGLAEGGFRVVGFDAGPWFRPLEDFASDETEQDKLYWTDTRVVDGANPIT
                     MGGKNSGKAVGGSTVHFAMVSLRFRPEWFKSHTALGYGADWPLDWREMWHYYTRAERA
                     LSISGPVSYPWGPKRPRYPYRPHELNGAAELLARGAESMGYKWTATPLATVSAPRGKS
                     PPCVYRGFCRFGCSTNAKQSQLVTFIPRALAAGAEIRDLAMVGRIEVNPAGHVTGVHY
                     HRDGRWRFQRARNVVVAGYAVETPRLLLASATNQFPDGLANSSGLVGKNLMTQSNQAV
                     FGTMEQEVRWNKGPPSLTITEHWNYDDRKDFFGGYCWMAQGPLPIEWVTVQTGSRGLW
                     GQPLIDEMKKYNHQVGLKMVGEMLPSERNTVTLADETDQYGLPVARVTYSWGVNDKAL
                     IQHALGQMQTSLEAVGARDIIRQEDDTNHLAGTARMGDDPTTSVVNADCRTWDIPNLW
                     VCDGSVFPTTGGVNPSLTITAIALRTADRIKALAARGEL"
BASE COUNT         1349 a         2168 c         2408 g         1459 t
ORIGIN      
        1 ggaagcgccc gggggcggga tgaactggga ttatcgctat tcctggctgc gtgattcgac
       61 gttcaccctc ggggccctga tcaacgcagg ttatcccgat gaagcgctgc gatggcgcga
      121 ttggctgctg cgggcaatcg caggctcgcc cgaaaagatg cgcacgatgt atcgcgtgga
      181 cggcggccgc gaccttcatg aacggacgat tgagggcctc tcaggctatc gttatgcccg
      241 tccggttcgg gtaggcaacg cggcctccga gcaatttcaa ctggatgtct ggggcgaggt
      301 cctcgactcg cttcggctcg cagaccgagc tggcctcccg acctccagac acgccgaagt
      361 tatgcgcgtg aaaatcgttg aacacctggc gagcgtctgg gatcagccag atgccggaat
      421 gtgggagtcg cgagatgcgc tgcggcatta tacctactcg aaggcaatgg cctgggtcgg
      481 cgtcgactgt tttctcagga gcccggcagc gacgaacgcc gatacggcgc tgctgacgcg
      541 gctgactgag ctgcggcgcc aaattcacca ggaggtttgc cgcgaggcgt ggcactccgg
      601 actgggaacc ttcacccagt attacggcgg caccgagcct gacgcgagtt tgctgctgtt
      661 gccgctggtc ggctttctgc ccgtcgaaga tccgcgaatg gcggccacga ttgacgtcat
      721 tggacgcgat ttgaacgacg gcggtctgat tcggcggaca cgatccggcg gcgatggagc
      781 tttcattgcc tgctcatgct ggatggtgga ttgcctgagt atgcaaggca agagttacgc
      841 cgccgcttcg ttattggagc gtgttcttga tcttcgtaac gatgtcggct tgctatcgga
      901 agagtacaac gtacccgggc gacatcttag tggtaacttt ccccaggccc tcagtcatct
      961 ggcggtggtg aactcggccc ttggcctgtg tggaccagtc ctccagcgcg gcggtggtta
     1021 gcctgccgca acaggcggtt ctgggtccgg ttccctcgcc gcgtcgcaat gatggatcgg
     1081 gcattacgga taaattcgtt tccaactgcg ctccggccgg aacaccgcgg ttggcgtcac
     1141 gttgaattgc cgactgttgc aaaggagcgg caaatggcga tgaacgtcag tgaattcgtg
     1201 tggcatcgcc tgaccgagtg gggcgtcaaa cgggtattcg gctatcccgg cgacggcgtc
     1261 ggcggtcttg atgtcgcgct cgagcgggcc aaggacaaaa ttcaatacat ccaggtgcgg
     1321 catgaagaaa tggccgcatt catggcctcg gcacacgcca agttcaccgg tgaggtaggg
     1381 gtctgctacg cgacgtcggg gcccggcgca attcatctgc tgaacggttt gtatgacgcc
     1441 aagatggatc acgttccggt ggtggcactg gttggccagc aggcccgttc ggcgcttggc
     1501 gctcactatc agcaggaagt cgacctgcaa tccttattca aggacgttgc ggctgatttc
     1561 gtggcgttgg cttcggtgcc aacgcaaata cggcatttga ttgaccgggc aatgcgcatt
     1621 gccgccaatc gacgcactgt gacctgcgtt attcttccca acgatttgca gggattacca
     1681 tacgaggatc cgccgctcgt ccacggcacg acgcacaccg gcgtgggtta tgcgggtccg
     1741 gcgctgctgc cggagaatga cctgttgcac gatgccgcca gcgtacttaa cgcgggtaaa
     1801 aaggtggcga tgctcgtggg cgccggcgcg cttaacgcca ctgacgaagt catcgaagtt
     1861 gccgaacgcc tccaggccgg gatcgccaag gcactcctgg gccaggccgc agtgccggac
     1921 gatctgcctt tcgttacggg cagcattggt ctcctgggca ccagcccgtc ctgggatatg
     1981 atgcaagagt gcgatacttt gtttatggtg ggctcggctt tcccgtacag cgagttcttg
     2041 ccgaaacccg gcaaagcgcg cggcgtgcaa atcgatatcg acggtacccg aaccagtctc
     2101 cgcttcccta tggaggtcaa tctgatcggc gacagcgcaa aaactctgcg agcgctgttg
     2161 ccgcttctgg tgcagaagcg ggccgatagt tggcgccggg acatcgaaaa gaatgtcgcg
     2221 aagtggtgga aaacattgga agatcgcgcc atggagccgg cggatccgat caatccgcag
     2281 cgcgtgttct gggaattatc caagcggctg cccgacaatt gcatcatgac cggcgacagc
     2341 ggatcggtgg ccaactggta cggccgcgac attaaaatgc gccgcggtat gaagggttcg
     2401 ttgtccggca gtctcgcctc gctcggcgca gcaacgccgt acgcgatggc ggcgaaactg
     2461 gcgtttcccg agcgcaccgt gatcgctttc atcggcgacg gggcaatgca aatgaacggg
     2521 ctgaacgtca tgattacgat ttcaaagtat tggaaggaat ggtcgaatcc gcatctcatc
     2581 gtgatggtgc tgaacaatcg cgacctcaat caggtcacct gggaagagcg ggttcaactc
     2641 ggcgagggca agaccgaatc aacccagtcg atcccggatt ttgcttacca cacctacgcc
     2701 gagctgcttg ggttgcgagg catcgtggtg cgtaatccgg aaagcgtggg tgcagcgtgg
     2761 gatgcagcac tctcggcgga tcggccggtc atcttgaaca tttataccga tcccaacgtg
     2821 ccgcctctgc cgcctcacat taccttgaag gacgccaaaa atttcatcac catgaccacg
     2881 agcgagccgg aactgggcag cgtgttgaaa aacaccgcga gggaagttct ggccaccgtg
     2941 cttcccggca aggattgagc cttgaccaaa aatcctccga tcagttcggt ccacgcgcac
     3001 gcctataccg ttcccactga cctgccggaa actgacggca cgctggagtg ggactcgacg
     3061 acgatcgtca tcgtcgacat cgaggccggc ggtcgacaag gtctgggtta tagctacacc
     3121 cacgcgtctg cggcgacact gataaaccat acgctcgcga agatcgtggg aggtcaaagc
     3181 gcgctgcacc caggggcgtg ctggcgggcc atgcagcggg cagtgcggaa cctcggccgc
     3241 tccggcctcg ttgcgaccgc catttccgcg gttgacattg ctttgtggga tctcaaggcg
     3301 aagctttttg accttccgct cgcgagtctg ttgggtggcg ttcgtcaggt ggttccgatc
     3361 tacggcagcg gcggcttcac caactacacg aacgaccagc ttgccgatca acttcgcgat
     3421 tgggtggaaa gagacgggtg ccgcttcgtc aaaatgaaga tcggcaccga cccggcgcag
     3481 gatccttcga gagtggccgc cgccaaggct gcgatcgggg ccgctgaatt gttcgttgac
     3541 gcgaacggcg cctacaccgt gaagcaggcc caacacctcg cgcaggagtt tgccgccggt
     3601 caggatgtgc gctggtttga agaaccggta tcgtcggatg atctcgacgg ccttcgccgg
     3661 gtacgtgacc atgttcgctc gcccatggaa gtcgcggccg gcgaatatgg ttacgacatc
     3721 gactatttcc gccgcatgct cgaggcgggc gcggtcgatg tgcagcaggc cgatgccacg
     3781 cgctgtggcg gcgtcaccgg tttcctgcat gcggccacac tttgcgacgc atttcacacc
     3841 gatctttccg ctcactgtgc cccggcactg catttacatc tgggatgcgc cgcgccccgt
     3901 ctgcgccatc tcgagtggtt tcatgaccat gtgcgtattg aacgtttgtt cttcgacggc
     3961 gcgccggtgc cgggcaatgg cgtcattgca ccggacatga gccgagcggg gcttggcctt
     4021 acgctcaggc aagccgacgc ctctcgcttt gctgcgacgc catgaaacgt gaactggctc
     4081 aggaggtgcc tctgggggcc agaagcaggg ttacttcgcc ggtggcgtcc cggtgccgct
     4141 ccctcgcttc gaaggccgct tcggcatcgt catcgcagta caacgtggcg gcggggctgc
     4201 tggccctggc ggtcggtctt caattgctgc cacgggcccg caacgctgcc gcgaagagcg
     4261 tcgttgccgg accgcctcgt tcaccctcga tcgatgtctc taccagcggg cgcgccggcc
     4321 ggcggctgaa ccgtgctgcc ggagtgatcg cggcatccgt gctggctgat agcgccatcg
     4381 agcattatcg cggttcgttt cacaataagg cgatgctggc accgctcatt accgcgtcgt
     4441 tatctctggc ggcgagcggg catggtgtga ccgacagacg gaccgggcct cattggctgc
     4501 gcgattgcgc ctatgcggcg gcgggtctga ccggtttgat tgggacagcg ttccacattt
     4561 acaatgttgg caagcgccca ggcggggttg gttggcaaaa cctgttctat ggcgcaccga
     4621 tcggggcgcc ggcggcgttg gttttgtcgg gcacgatggg cttcctggcg gagcgggtgc
     4681 gcgacacgcc acccggcacg gtgccgacga tcgccggcct gcctgcggga cgcgttgtgg
     4741 cggcggccgt cagcgccggc ttgcttggaa ccgttggcga ggcgggtctg ttgcattttc
     4801 ggggcgccta tcaggatccg ttcatgtacc tgccggtcac ggtgccaccg gtcgccgccg
     4861 ctctgatcgg caatgccgcc cttggtcaaa ccggcatacg ccgccgcgcg acgcgacttt
     4921 tgctgcgcct gacggcggcg cttggctttg ccggatccgg atttcacatt tacggcgtcg
     4981 gccgcggaat gggcggctgg cgaaactggc ggcagaattt gctgaacggt ccacccatcc
     5041 cggcgccgcc gagcttcacc gggcttgcgc tcgccggact tgcggcgttg ggactgatgg
     5101 aggaccgccc cgatgactga tcgttacccg gggtacgacg ttctggcaaa gcggtggtcg
     5161 caatcctgga acagggtgac acgcgccgtg atcgatcggc gccttgcggt ctcgcgggag
     5221 ccgcgctttt tcaccatgcc cgagtgggag accctcgacg cggtctgcgc ccgcatcatg
     5281 ccgcaatcct ctgatcgccc gcgcattccg ctcgcagctt atgtcgatgc caaaattcat
     5341 gacaaacgcg aggacggata tcgttacgcg gccatgcccg cccaagggga agcctggaag
     5401 cgggggcttg cggcgttgga tcaggaggca accgatgcac acgggctgcc gttccacaga
     5461 cttccgtccg agacacagga cgggctgctc cggcggatgc agcaaggcga tttgcgatct
     5521 gccgtttggg ctggcatgcc gtgcaagcta tttttcgagc accgtgtgat cccggatatc
     5581 actcacgcgt attacgcgca tccctcagcc tggaacgaga tcggcttcgg tggtccggcg
     5641 agtcctcgcg gttacgtcag gatgcaattg gatcggcgcg atccatggga ggccgtggaa
     5701 gcgcaacccg gcgaggagga acaggtgcga cgggacaatg cgcatgtcgg atgacccgtt
     5761 tgccgccccg cgcgcgacca acggccgcgc gcccgatgta ttccggcacg gcagctgggt
     5821 gccgatgcgg caatacgatg aggacgaggc tgtggatttc gtcgtgatcg gcaccggcgc
     5881 ggggggcggc ccgctgatct ctgggctggc ggaaggcggc tttcgcgtgg tcggtttcga
     5941 tgccgggccc tggttccggc cgctcgagga ctttgcctcc gacgaaacgg agcaggacaa
     6001 actttactgg accgacacaa gggtcgtgga tggcgccaac cccatcacca tgggcggcaa
     6061 gaacagcggc aaagcggtcg gcggcagcac cgtgcacttc gcgatggtct cgctgcggtt
     6121 ccggccggaa tggttcaaat cgcacaccgc cctgggatat ggcgccgact ggccgctcga
     6181 ttggcgggag atgtggcatt actacacaag ggccgaacgg gctctgagca tttccggtcc
     6241 ggtgagctac ccgtgggggc cgaagcggcc gcgttatccg tatcgtccgc atgaattgaa
     6301 cggcgccgca gagttgctgg cccgcggtgc cgagtctatg ggctacaaat ggactgctac
     6361 gccgttggcc acggtttcgg cgccgcgcgg caaatcgccg ccatgcgttt atcgcggctt
     6421 ctgccgcttc ggttgttcaa ccaacgccaa acaaagccag ttggtcacgt ttattccgcg
     6481 cgcgctggcg gcaggcgccg aaattcgcga tctggcgatg gtgggacgga ttgaggtgaa
     6541 cccggctgga cacgtcaccg gagtgcatta ccaccgcgac ggacgatggc gcttccagcg
     6601 cgcccgcaac gttgtggtcg ccggctatgc ggttgagacg ccgcggttgt tactcgcctc
     6661 cgcgacaaat cagtttcccg atgggttggc caacagctcc ggtttggtcg gcaaaaatct
     6721 catgacgcag tcgaaccagg ccgtgttcgg cacgatggag caggaggtgc gatggaacaa
     6781 aggtccgccc tcgctgacca tcaccgaaca ttggaattat gacgatcgaa aggatttttt
     6841 cggcgggtat tgttggatgg cgcaaggacc gctgccgatc gagtgggtga cggtgcaaac
     6901 cggctcgcgc gggctgtggg gtcagccgtt gatcgacgag atgaagaaat acaatcacca
     6961 ggtcggcctc aaaatggtgg gcgagatgtt gccgagcgaa cgcaacaccg tgaccttggc
     7021 ggacgagacc gatcagtacg ggttaccggt cgcccgcgtc acatatagtt ggggcgtcaa
     7081 cgataaagca ctgatccagc atgccttggg tcaaatgcaa acgagtttgg aagccgtggg
     7141 ggctcgtgac atcatccgac aggaagatga caccaaccat ctcgccggta ccgcgcggat
     7201 gggcgatgac cccacaacga gcgtggtgaa tgccgactgc cgtacgtggg atattcctaa
     7261 tctgtgggtg tgcgacggat cggtgtttcc gaccaccggc ggggtcaacc cgtcattgac
     7321 gatcacggcg attgcgttgc gaacggcgga tcgcatcaag gctttggcag cgcgtggcga
     7381 gctg
//
LOCUS       DATAVD010001585         3531 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3125373, whole genome shotgun sequence.
ACCESSION   DATAVD010001585 DATAVD010000000
VERSION     DATAVD010001585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3531
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3125373"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..548
                     /locus_tag="VHX39_30355"
     CDS             <1..548
                     /locus_tag="VHX39_30355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3995496.1"
                     /translation="GTDRRYEDVAHHTIVLGPRYRGLLRDIFKHKVLAKDFSLYLHRP
                     TATDRSLAPAGCDAFYVLSPVPNLAGGTDWRSAAEPYRRAIEAHLSATVLPGLERHVV
                     TSRLMTPLDFQDRLCAWQGAAFGLEPVLLQSAWFRPHNRSEDIAGLYLVGAGTHPGAG
                     VPGVLSSAKVLDRVVPHAATL"
     gene            532..1566
                     /locus_tag="VHX39_30360"
     CDS             532..1566
                     /locus_tag="VHX39_30360"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phytoene/squalene synthase family protein"
                     /protein_id="HEX3995497.1"
                     /translation="MPQRFDSIDADLQFCRALLGNGSKSFDAAAKLLPRGVRDPAIAL
                     YAFCREADDIIDGGSGGLAWLRQRLAGAYAGQPHDLPADRAFARVVARFDIPRALPEA
                     LLDGFAWDADGRRCHDMGDLRAYAVRVAGSVGAMMAIVMGVRDPERLGAAIDLGVAMQ
                     LSNIARDVGEDARNGRLYLPLDWLAEAGIDPDGFLAGPAHSAALGQVVTRLLAVADHH
                     YGQASSAIGRLPLNCRLGIGAARLLYAEIGREVGRRGMDSVSGRAVVSRRRKAGVLMT
                     GLAGMVLPLRPLSGAWAAEGRFLVDAVVRNVPVAVSAASPVSWWDLAERLRWTIALFE
                     RLERRQRVQS"
     gene            1780..1941
                     /locus_tag="VHX39_30365"
     CDS             1780..1941
                     /locus_tag="VHX39_30365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995498.1"
                     /translation="MNWPSGGQWEWAIGEIIILPLLFFELYRLRRSQRRDRERAKEAA
                     TADDDRRAP"
     gene            complement(1954..>3531)
                     /locus_tag="VHX39_30370"
     CDS             complement(1954..>3531)
                     /locus_tag="VHX39_30370"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX3995499.1"
                     /translation="DGGCMAEQKTRLTAAIVLLASLLPLAVAMPAAAAPDQPNKDVVA
                     RGKYLADAGDCMACHTNPGGTPFAGGRYLTTPFGPLSTPNITPDQATGIGGWTDDQFY
                     RVFHEGVGKGGEYLYPAMPYPWYTKVTRDDVLAIKAYLFSLKPVNAPRKPNKLMFPFN
                     IRAGLLAWNEAFFHQGTFKPDPGQSAEINRGAYLVQGLGHCGECHNAHGLLGNGAVAK
                     PLQGGPIQNWYAPNLTSDVHEGIGKYSYDQLVSYLKTGHAQGMGVAAGPMAETIHDSL
                     SKLTDTDLHAIVAYLKATRPEATYTATLRSDYTGPQPTGRQVYLSHCVSCHQENGQGI
                     QGAVASLVGNGAVLAAGPQDVIRVILGGIEAKGTDAPMPAAGTEMTDQEVAEVTNYIR
                     QAWGNKAPPNAGSGMAGELRKTTIKSLYGGKASSCPPVSPADVAAAISDPKNGVQDKL
                     RAMTAATVLQTAEAVVPKVKAAAPKATQADIVNGLTLAYCPIVRQDANLPEPLKISQL
                     DEFSERVYSELKGNGKE"
BASE COUNT          536 a         1055 c         1203 g          737 t
ORIGIN      
        1 tcggcacgga ccggcgttat gaggacgtgg cgcaccacac gatcgttttg ggcccgcgct
       61 atcgcggttt gctgcgcgat atcttcaagc acaaggtttt ggctaaggat ttttccttgt
      121 atttgcatcg cccgaccgcg accgaccggt cgttggcgcc ggccgggtgc gacgcgttct
      181 acgtcctgtc gccggttccc aacctcgcgg gcggcacgga ttggcgcagc gcggcggaac
      241 cttatcggcg ggcgatcgag gcgcatttat cggcgacagt gctgccgggc cttgaacgcc
      301 acgtcgtcac atctcgcctg atgacgccgc tggatttcca ggatcggctg tgcgcctggc
      361 agggtgcggc gttcggactg gagccggtgc tgctgcaaag cgcctggttc cgcccgcata
      421 accggagcga ggatatcgcc gggctgtatc tggttggggc gggcacgcat ccgggggcgg
      481 gtgtgcccgg ggtgctgtcc tccgccaagg ttcttgatcg cgtggtgccg catgccgcaa
      541 cgctttgatt cgatagatgc cgatttgcaa ttttgccgtg ccctgctggg caacggctcg
      601 aaaagtttcg atgccgcggc gaagttgttg ccgcgcggcg tccgggaccc ggcgatcgct
      661 ctctatgcgt tctgccgcga agccgatgat atcatagacg gaggtagcgg cggtctggcg
      721 tggctgcgtc aacgcctggc aggggcctac gcgggccagc cccacgatct gcccgccgat
      781 cgagcgtttg ctcgggtggt ggctcgtttt gatattccgc gtgccttgcc ggaggcgctg
      841 ctggacggat ttgcctggga cgccgacgga cgccgctgtc acgatatggg cgacttgcgt
      901 gcctatgcgg tgcgggtcgc cgggtctgtg ggcgccatga tggcgatcgt gatgggcgtc
      961 cgcgaccccg aacgattggg tgcggcgatc gacctcggcg tggcgatgca attgtccaat
     1021 attgcccgcg atgtgggcga ggatgcgcgt aatggacgcc tctacctgcc gttggattgg
     1081 ctggccgagg ctggtatcga ccccgacggt tttctggccg gcccagccca ctccgctgcc
     1141 ctgggacagg tcgtaacgcg gctgctcgcg gtcgcggacc accattacgg gcaggcaagc
     1201 agcgcgatcg gtcggttgcc gctgaactgc cggctgggga tcggcgccgc ccgacttctc
     1261 tacgccgaaa ttgggcgtga ggttggccgg cgcggcatgg actcggtgtc cggacgggcc
     1321 gtggtgtcca ggcgtcgcaa agccggggtg ctgatgaccg gcctcgcggg gatggtgctg
     1381 ccgcttcggc cgttgtccgg tgcgtgggcg gctgaaggac gctttcttgt cgacgcggtg
     1441 gtccggaatg tgccggtcgc ggtatccgcc gcaagtccgg tgtcatggtg ggatctggcg
     1501 gaacggctgc gttggacgat cgcactgttt gaacggctgg aacggcggca gcgtgtgcaa
     1561 tcctagtgtc ccgaattcga agttcgccac agtgggcgaa cctcagattc gaaacactgg
     1621 ctctttgtta tcagtggcct gctggtccca gaagcctgcc gcacgatgcg aagaacttcc
     1681 ggggcaagac actagatcat ttgttcagcg ggtgatcctc gccgggatgc gtccggccgg
     1741 gggctcggcc ccaatgcctt caaacgcgcg gtgggtggca tgaactggcc gagtggcggt
     1801 cagtgggaat gggcgatcgg tgaaatcatc atcttgccgc tgctgttctt cgagctttac
     1861 agattgcgcc ggtcccagcg gcgggatcgg gagagggcca aggaagccgc caccgccgat
     1921 gacgatcggc gtgcgccata aggccgccca ccctcattct tttccgttgc ctttcagttc
     1981 cgagtagacc cgctcactga actcatcgag ttggctgatt ttcaacggtt ccgggaggtt
     2041 cgcatcctgc cggacgatcg gacagtaggc gagcgtcagg ccgttgacga tgtccgcctg
     2101 ggtggctttc ggtgccgcgg ccttgacttt cggcacgacg gcttcggccg tctgcagcac
     2161 ggtcgcggcc gtcatggcac gcaatttatc ctgaacgccg ttcttcggat ccgatatggc
     2221 cgccgcgacg tcggcgggtg ataccggcgg acatgaggag gccttgccac catagagcga
     2281 tttgatcgtg gttttgcgaa gctcgccggc catgccgctg cccgcgttcg gtggcgcctt
     2341 gttgccccag gcctgacgga tgtagttcgt tacctcggca acctcctgat ccgtcatctc
     2401 cgttccggcc gccggcatcg gggcgtcggt gcccttggcc tcgatcccgc ccaggatcac
     2461 acgaattacg tcctgtgggc cggcggccag cacggcgccg ttgccaacga gcgaagcgac
     2521 ggcgccctgg atcccctggc cgttctcctg atgacacgaa acgcaatgac tcagatacac
     2581 ttgccggccg gtgggttggg gaccggtgta atccgaccgc agcgtcgcgg tataagtggc
     2641 ttccggccgc gttgctttca gataggcgac gattgcatgc aggtcggtat ccgtcagctt
     2701 gctcaggctg tcgtggatcg tttccgccat cggacctgcc gcgacgccca ttccctgggc
     2761 gtgcccggtc ttcagatagg aaaccagttg atcgtaagag tattttccaa tgccttcatg
     2821 cacgtcggag gtcaggttcg gtgcatacca attctggatg gggccgccct gcagcggctt
     2881 ggcaaccgcc ccgttgccga gcaggccgtg ggcgttgtgg cattcgccgc aatgtccgag
     2941 gccctgcacc agatacgcgc cgcggttgat ttcggcggac tgcccggggt cgggtttgaa
     3001 ggtgccttgg tgaaaaaacg cttcgttcca ggctaacagc ccagcgcgaa tgttgaacgg
     3061 aaacatcagc ttgtttggct tgcgcggggc gttcaccggc ttcagcgaaa acaggtatgc
     3121 cttgatcgcc aggacatcgt cgcgcgttac tttggtgtac caggggtaag gcatggcggg
     3181 ataaaggtat tcgccgcctt ttccgacacc ctcgtggaag acgcggtaaa actgatcatc
     3241 ggtccaaccg ccgatgccgg tcgcctggtc gggcgtgatg tttggtgtgg agagtggtcc
     3301 aaacggtgtg gtcaggtatc ggccgcccgc aaacggcgtg ccgcccgggt tggtgtggca
     3361 ggccatgcag tccccggcat cggcgagata ctttccgcgc gcgactacat ccttgttggg
     3421 ctgatcaggc gccgccgcgg cgggcatggc caccgcgagt ggcagcaggc tcgcgagcag
     3481 aacgattgcc gcggtcagtc gcgtcttttg ttcggccatg caacccccat c
//
LOCUS       DATAVD010001586         5349 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2757213, whole genome shotgun sequence.
ACCESSION   DATAVD010001586 DATAVD010000000
VERSION     DATAVD010001586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5349
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2757213"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..589
                     /locus_tag="VHX39_30375"
     CDS             <1..589
                     /locus_tag="VHX39_30375"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3995500.1"
                     /translation="TDQAMVWLDGLDVPMIKLLDASFAEPSNDDSQSISRPVGDSPAR
                     YGANMVPVDWKPETKSSPIFSYPYTKSRETLVTLSHNGDPDPYHGYKLRYINPATGGS
                     PMPTIGAFMALLPGGFNTAPYRSTDGTIYSVVEGTGETIVGDTVFRWKPRDIFVVPSW
                     HTHHHRAASEAVLFSFSDRPVQDVLGLWRQERLHA"
     gene            582..1769
                     /locus_tag="VHX39_30380"
     CDS             582..1769
                     /locus_tag="VHX39_30380"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX3995501.1"
                     /translation="MRDVLIAGAGLGGLTAALALIQRGHRVRVFEQAAELREVGAGVQ
                     IGPNGSRLLIALGLRQSMERVVCLPFGREFRHWNTGQTWRSFDLGDTSVQRFGAPHWT
                     VHRGDFHAVLVDAVRSADPDAIHSGNACVGFEQDDRGATIRLANGETATGDVLIGADG
                     VHSAIRQQMFGDGRAEFTGIMAWRGLVPLERLPEHQRRLVGNTWLGVGGHCVTYPLRR
                     GEILNFVAAIERDDWRVESWTVAGTTEECLHDLASWHEDLKTIVRNIDTPYKWALLGR
                     QPLDHFAEGRVCVMGDAAHPTLPFLAQGANMALEDAVIVARCLDAYDEVPEALRHFER
                     ARLERTAAIVRGSADNTKRFHNPVWADATAAAAYVEQEFHPAKVAQRYDWLYQYDAAT
                     VAV"
     gene            1977..4475
                     /locus_tag="VHX39_30385"
     CDS             1977..4475
                     /locus_tag="VHX39_30385"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
                     /protein_id="HEX3995502.1"
                     /translation="MSDARLSTATARSRVTSRLALPAQDEDVAALRRAVIAKLTYAVG
                     KDPVVATERDWFVATALSVRDRIVDRWMMSTRATHTEQRKRVYYLSLEFLIGRLLIDA
                     LNNLQMLEPMRAALAELGVDLDRLREVEPDAALGNGGLGRLAACFMESMATLTVAAYG
                     YGIRYNHGLFRQVIRDGWQREFPESWLSLGNPWEFERPEVSHMIGFGGAVRREIRADG
                     TEHHIWEPAETVEAIAYDTPIVGWRGRHVNTLRLWSARAPDPLRLDTFNQGDHVGALA
                     ARARANSISQVLYPSEDTPAGQELRLRQEYFFSAASLHDLLYRHIHQHGDLRTLPEYA
                     AIQLNDTHPAIAIAEMMRMLVDVHDIPWKEAWAITTAVFSYTNHTLMPEALEAWPVHL
                     LERLLPRHMQIIFYTNLLHLDGLRAAGHSDPALLSSVSLINEHNGRQVRMGALAFLGS
                     HRVNGVSELHTNLMRATVFHDMHTLYPDRIVNKTNGITFRRWLFEANPGLTGVLVDAL
                     GERVLDDASALEGFAAFAGDTSMHARLAEIRRANKVALSNRIMDRLRIRIDPDAIFDV
                     QVKRIHEYKRQLLNILETVALYEDMRADPTRDWVPRVKIFAGKAAAGYHRAKLIIKLI
                     SDVAAVVNNDPTLRGMLKVVFFPNYNVSRAEVIIPASDLSEQISTAGMEASGTGNMKL
                     ALNGALTIGTLDGANIEIGDRVGAENIFIFGLTAAEAQQRRARGIDAREIIAASLPLQ
                     RALDAIATGLFSPSEPDRFRDIVDVLTYHDHFLVSADFDSYAAAQQQVAAKWQDQAAW
                     WRSSILNTAGVGWFSSDRSIREYCDDIWNVKLSG"
     gene            4477..>5349
                     /locus_tag="VHX39_30390"
     CDS             4477..>5349
                     /locus_tag="VHX39_30390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004273480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HEX3995503.1"
                     /translation="MKQPGPTRRSTPRWQASKAAIAAVVGARHGDPFAVLGPHRTAAG
                     VVIRALVPGATSVEIRGPDGGTIAAMLCRHPDGFFEVRLPTGREPGRYRLFAANADAN
                     WEFDDPFRFGPILGALDDHLLVEGTHQTLYERLGAHPMTLDGTAGVHFAVWAPNARRV
                     SVVGDFNAWDGRRHPMRKRIDSGLWEIFAPGIGEGAVYKFELAAADGTVQPLKADPFG
                     FAAEMRPSTASVVARTDNFPWTDAVYMHERGNADARRRPIAIYEVHLGSWRRGENGTF
                     LTYNQIADQMIPYVA"
BASE COUNT          968 a         1675 c         1666 g         1040 t
ORIGIN      
        1 aaccgatcag gcgatggttt ggttggacgg gctggacgtg ccgatgatca aattgctcga
       61 cgccagcttt gccgagccat cgaacgacga tagccagtcg atttcgcgac cagttggcga
      121 cagtcctgca cgttacggcg ccaacatggt tcccgtggat tggaagccgg agacgaaatc
      181 gtctccgatc ttcagttatc cgtacacgaa gtctcgcgaa acgctggtca cgctgtcgca
      241 caatggcgat ccggacccgt atcacggcta caaactccgc tacatcaatc cggcgaccgg
      301 tggttctccc atgccaacga tcggtgcatt catggcgctc ctgcccggtg gcttcaacac
      361 tgcgccgtat cggtccaccg acggcacgat ttattccgtc gtcgaaggca ccggcgaaac
      421 gatcgtcggc gataccgtgt tccgttggaa gccgcgcgac attttcgtcg ttccgagttg
      481 gcacacgcac caccaccgtg ccgcctccga agccgtgctg ttcagctttt ccgatcgccc
      541 ggtgcaggac gtgcttggcc tgtggcggca agaacgtctg catgcgtgac gttctcatcg
      601 cgggtgccgg cctgggagga ctgactgcgg cactcgcctt gattcaacgc ggacaccggg
      661 ttcgcgtgtt cgagcaagcc gccgaattga gggaagtcgg ggcaggggtg caaatcggcc
      721 ccaatggctc gcgactattg atcgcactgg gcttgcggca gtccatggaa cgcgtggtct
      781 gcctgccgtt cggccgcgaa ttccgccatt ggaacaccgg ccagacgtgg cgatcgttcg
      841 acctgggtga cacctccgtg caacgatttg gcgcaccgca ctggaccgtc catcgcggcg
      901 atttccatgc cgtgttggtc gatgcggtgc gcagtgccga tccggatgcc atccattccg
      961 gcaacgcctg cgtgggcttc gagcaggatg accgtggcgc gacaatccgc ctcgccaacg
     1021 gtgagaccgc gaccggcgat gtgctgattg gcgctgacgg agttcattcg gcgatccgcc
     1081 agcaaatgtt cggcgatggg cgggccgagt tcaccggcat catggcctgg cgcgggctcg
     1141 tgccactgga gcgactgccg gaacaccagc ggcgcctggt cggcaatacc tggcttggcg
     1201 tcggcggcca ttgcgtgacg tacccattgc gccgcggcga gatcctcaat tttgtcgcgg
     1261 cgatcgagcg cgacgattgg cgggttgaat cctggactgt cgcaggcacc accgaggaat
     1321 gtctgcacga cctggcgtcc tggcacgagg acctcaaaac catcgtccgc aacatcgata
     1381 cgccgtacaa atgggcgttg ctgggacgcc agccgctgga ccatttcgcc gagggccggg
     1441 tctgcgtgat gggtgacgca gcccacccga cgctgccgtt cctggctcag ggagcgaata
     1501 tggcgctgga ggatgcggtc atcgtggcga gatgcctcga tgcatacgac gaggtgccgg
     1561 aagccttacg tcacttcgag cgcgctcgac tggaacggac cgccgccatc gtgcgcggtt
     1621 cggcggacaa taccaaacgg tttcacaatc ctgtctgggc tgacgccacc gctgctgccg
     1681 cctatgtcga gcaggagttc cacccggcga aggtagcaca gaggtacgat tggctttacc
     1741 agtatgacgc ggccaccgta gcagtctgac cggcgatttg tgccggccgg ctccctggca
     1801 catcgtgtgc atgaaaagcg tcggtgaaaa cccgactgaa agcccttcgg gtcatactcc
     1861 tgtatcgcct ttcgcgaggc tcgcttcgtg ccagactgca ctacccgcat aatcgtatac
     1921 gcccggcggg cagaagtggt aggcacgcaa cttacgtcca gacgaggatc ccgccgatga
     1981 gtgatgcccg cctgtccacc gcaaccgccc gaagccgcgt caccagccgt ctcgccttgc
     2041 cggcacagga tgaagatgtg gcagcgctgc gccgcgctgt gatcgccaaa ctgacctacg
     2101 cggtgggcaa ggacccggtc gttgcgaccg agcgcgactg gttcgtcgcc accgctctga
     2161 gcgtgcggga ccgcatcgtc gatcgttgga tgatgtcaac tcgggccacg cataccgagc
     2221 aacgcaagcg ggtttattac ctgtcgctgg aattcctgat tggccggctg ctgatcgatg
     2281 cgctcaataa cctccagatg ctggagccta tgcgcgccgc gctggccgag cttggcgtcg
     2341 atctcgaccg gctgcgggag gtcgaacccg acgcggcctt gggcaacggt ggcctcggcc
     2401 ggctcgccgc gtgtttcatg gaaagtatgg cgaccctgac ggtggccgcc tacggctacg
     2461 gcattcgcta caatcatgga ctgttccgcc aggtgatccg cgacggttgg cagcgcgagt
     2521 ttcccgaaag ctggctgtcc ctgggcaacc cgtgggaatt tgaacgcccc gaggtgagcc
     2581 acatgattgg tttcgggggc gccgttcggc gcgagatccg ggctgacggg accgaacatc
     2641 atatctggga gcccgccgaa accgttgagg ccatcgctta cgacacgccg atcgtcggct
     2701 ggcgcgggcg ccatgtgaac accttgcgcc tgtggtcggc gcgggcaccc gacccgctgc
     2761 ggctggatac gttcaatcaa ggcgaccacg tcggcgccct cgcggcgcgg gcccgcgcca
     2821 attcgatctc acaggtgctg tatccgagcg aggacacgcc ggccggccag gaactgcgtc
     2881 tgcgccagga gtatttcttc tccgccgcct cgttgcatga tctgttgtat cgccacatcc
     2941 atcagcatgg cgacctgcgc acattgccgg aatacgccgc aatccagctc aacgacacgc
     3001 atccggccat cgccatcgct gaaatgatgc gcatgctcgt cgacgtccac gacatcccct
     3061 ggaaagaggc ctgggcgatc accactgccg tgttctcata caccaaccat acgctgatgc
     3121 cggaggcgtt ggaggcatgg ccggtccatc tgctggaacg gctgctgccg cgccatatgc
     3181 aaatcatttt ctacaccaac ctgctgcatc tcgatggatt gcgcgccgcc gggcatagcg
     3241 atcccgcgct gctgtcatcg gtgtctttga tcaacgagca taacgggcgt caggttcgca
     3301 tgggtgccct ggcgtttctc ggctcgcatc gtgtcaatgg cgtgtccgaa ctgcacacga
     3361 acctgatgcg ggccaccgtg ttccacgaca tgcatacgtt gtatccggat cggatcgtta
     3421 acaaaaccaa cggcatcaca ttccgccgct ggctgttcga agccaacccc ggcctcaccg
     3481 gggtgttggt ggatgcgctt ggcgagcgcg tgctggatga cgcatcggcg ctcgagggtt
     3541 tcgctgcttt cgccggcgat acgtcgatgc atgcgcggtt ggcagaaatt cgccgcgcca
     3601 acaaggtggc gctgtccaac cgcatcatgg acagattgcg gatcaggatc gatccggacg
     3661 ccatcttcga tgtccaggtc aaacggatcc atgaatataa gcgtcagttg ttgaatatcc
     3721 tggagacggt ggcgctgtat gaagatatgc gtgcggaccc aacgcgtgac tgggtgccgc
     3781 gggtcaaaat cttcgccggc aaggcagccg ccggttacca ccgcgccaag ttgatcatca
     3841 aactgatcag cgacgtcgcc gccgtggtca acaacgatcc gaccttgcgc ggcatgttga
     3901 aggtcgtgtt cttcccgaat tacaacgtca gccgggccga ggttatcatt ccggcatcag
     3961 acctttcgga gcagatctcg acggccggca tggaggcatc gggaaccggc aacatgaaac
     4021 tggcgctgaa cggtgccctg acgatcggca cgctggatgg cgccaatatc gaaatcggtg
     4081 atcgtgtcgg tgcggagaat atcttcattt ttggactgac tgccgcagaa gcgcaacagc
     4141 gtcgcgcgcg cggcatcgac gcccgcgaga tcattgccgc ttcgcttccg ctgcagcggg
     4201 cgctcgacgc gattgccacc ggtttgttct cgccatccga gccggatcgc ttccgcgaca
     4261 tcgtggatgt gcttacgtac cacgatcatt tcctggtctc tgccgacttc gattcctacg
     4321 cggctgcaca gcaacaggtc gccgcaaagt ggcaggatca ggcggcctgg tggcgttcga
     4381 gcatcctcaa caccgccggt gttggatggt tttcgtccga tcggtcgatc cgggaatatt
     4441 gcgacgatat ctggaatgtg aagctgtctg gctgacgtga agcaaccagg gccgactcgc
     4501 aggtccacac cgcgctggca ggccagcaag gccgcgatcg ccgctgttgt cggcgcccgg
     4561 catggcgatc cgttcgccgt cctcggaccg catcggaccg ccgccggagt agtcattcgc
     4621 gcattggtgc ccggcgccac ttcggtcgag attcgcgggc cggacggcgg cacgatcgcg
     4681 gcgatgctat gccggcatcc ggacggcttc tttgaggttc ggcttcccac cggccgcgag
     4741 cccggacgat atcggctatt tgccgccaat gccgatgcga actgggaatt cgatgacccg
     4801 ttccgctttg gaccgatcct tggggcgctg gacgatcacc tgttggtcga aggcacgcat
     4861 caaacactgt atgaacgtct cggcgcccac ccgatgacgc tggatggcac cgccggcgtg
     4921 catttcgcag tctgggcgcc gaatgcgcgc cgggtatccg tggtcggtga cttcaacgcc
     4981 tgggatggcc gccggcatcc gatgcgcaaa cggatcgact ccggattgtg ggaaatcttc
     5041 gccccaggaa ttggcgaagg cgcagtctat aagttcgagc tcgccgctgc tgatggcacg
     5101 gtgcagccgc tgaaggccga cccgttcggg ttcgctgccg agatgcggcc atcgaccgcc
     5161 tcggtcgttg cgcgcaccga caattttccc tggaccgacg cggtctatat gcatgaacgc
     5221 ggcaatgctg acgcgcgacg ccggccgatc gcgatctacg aggtccatct gggctcatgg
     5281 cgccgcggcg aaaatggcac gttcctgacc tataatcaga tcgccgacca aatgatcccg
     5341 tatgtcgcc
//
LOCUS       DATAVD010001587         3252 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2382766, whole genome shotgun sequence.
ACCESSION   DATAVD010001587 DATAVD010000000
VERSION     DATAVD010001587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3252
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2382766"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(462..1661)
                     /locus_tag="VHX39_30395"
     CDS             complement(462..1661)
                     /locus_tag="VHX39_30395"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3995504.1"
                     /translation="MDVTPMSPGCLSGIRVLDLTQFEAGTTCTEALAWMGADIAKVEN
                     PKGGEAGRTGFGDAYYFMMYNANKRSITVNLKSERGLALVKEMVKQADVFTENFAPGA
                     VERLGLGYDVVSAINPKIIYAQVKGFGDGSPYEKGLAFDPIAQAAGGSMSITGERDGR
                     PIKPGPTIGDTGTGMLLAFSIVSALFDRTRTGKGRRLQVAMQDSVMHYSRGMFITQAR
                     TGAAAPRRPPANNPPGGIYPCQPGGPNDYVYLLTSRANPEHWPRLLKLIGREDLIGNP
                     RYDTPDARLTCEAEVDEIVSAWTRQRTKQEAMTQLSAVGVPAGAVLDSMELTNDPSFR
                     QRGILQTMTHGERRMTMPTWPVRFNGVPADVKSAPLLGEHTAEVLADWLGLDADVVAG
                     LRKDGVV"
     gene            1894..2460
                     /locus_tag="VHX39_30400"
     CDS             1894..2460
                     /locus_tag="VHX39_30400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HEX3995505.1"
                     /translation="MIAAVVGESSDPNSTSQTMQVYFTSDHHFGHSGARSLYRRPFAS
                     VAEMDQQMVVRWNSIISPKDEVWHLGDFAVRQARERVSSLLSELHGQKHLIAGNNDDA
                     AVTECAGWKSVQSYAELTVDGTRLILCHYPFRTWRDMGRGSLNLHGHSHGRLKPQPRQ
                     FDVGVDARAFCPVRLLDLIKPPRPHCRA"
     gene            complement(2512..>3252)
                     /locus_tag="VHX39_30405"
     CDS             complement(2512..>3252)
                     /locus_tag="VHX39_30405"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3995506.1"
                     /translation="NGVDADVWNPESDPYLASHYTARDLGGKRACKAALQQELGLEPT
                     SESPLICFVNRLTHQKMAEGVLELLPAMADRGIQFVLHGQGDPDLENAFAAQMGQSPQ
                     VVLRVGYEESFAHRLTAGADISLVPSRFEPCGLTALYAMRYGALPVSRPVGGLADSVV
                     DAGDAAEPGGDATGFNFEGDCASGLLAGLDRARARFASRETWQRMQRTAMRRDFSWHT
                     AAQHYLALYDELVPGIGFGALTVGRDAA"
BASE COUNT          628 a         1052 c          940 g          632 t
ORIGIN      
        1 ccgcgccggc atagcgttca ttcaggtccc gtaccagcct ggcgtcctct tcgatgatga
       61 tccgcagagc gaagttcgag ggcgggatca ttcgccgccg ttccagctcc catcggcagc
      121 aggccagcgg tccgggcaat aatgtgggca aaactccctc ctgggccggg tgttcatccg
      181 gtccggcccg tgtcagctat atggtgccgt ggatattgtc attccagagt gaaccccagt
      241 gttgccgggg caattcctgg cgttacccgg tcaggattgc gcttcctcgc gggccaggcg
      301 cgcgggccgc gtgtcaccgc ttaagcgggt cggtatgagt ggtaacaatc accaattttg
      361 ctgctgaggg cgccggccgt ccgtcgacgc tcgggcccga cagggatgaa gccgcggccg
      421 cagcctgtgg ccaaatgttc gactctgccg ccgcactccc gtcacacaac gccatcctta
      481 cgcaatcccg cgaccacgtc tgcatcaagt ccgagccagt cggcaagaac ttcggcagtg
      541 tgctcgccca acaatggcgc cgactttacg tctgccggaa cgccgttaaa gcgcaccggc
      601 catgtcggca tcgtcatcct ccgttcacca tgcgtcatgg tttgcaagat gccgcgctga
      661 cggaaactgg ggtcgttggt cagttccatg gaatccagaa cagcaccggc ggggacgcca
      721 acggcactca attgcgtcat cgcctcctgc ttcgtccgtt gccgcgtcca ggcggagacg
      781 atctcgtcga cttcggcttc gcacgtcagg cgagcatcag gcgtgtcgta gcgcggattt
      841 ccgatcaggt cctcgcgccc aatcagcttc agcaaacgag gccaatgctc gggattggcc
      901 cggctggtga gcagatagac gtaatcgttg gggccgccgg gctggcaggg atagatgccg
      961 ccgggtgggt tgttggccgg cggacgccga ggcgcagcgg caccagtgcg cgcctgggtg
     1021 ataaacatcc cgcggctgta atgcataacc gagtcttgca tcgcgacctg caaccggcgg
     1081 cccttgccgg tacgcgtgcg atcgaacagc gcgctgacga tactgaatgc cagcagcatc
     1141 ccggtgccgg tgtcgccgat tgtcgggcct ggcttgatcg gcctcccgtc ccgctcgccg
     1201 gttatgctca tcgatccgcc cgccgcctgg gcaatcggat cgaacgcgag gcctttctca
     1261 tacgggctgc catctccaaa acccttgacc tgagcgtaga taatcttcgg attgattgcg
     1321 ctcacgacgt catagcccag gcccagacgc tccaccgcgc cgggagcgaa attctcagtg
     1381 aacacgtcgg cctgcttcac catttccttg accagtgcca aaccacgctc ggacttcagg
     1441 ttgaccgtaa ttgaacgttt gttggcgttg tacatcatga aatagtaagc gtcgccgaag
     1501 ccggtgcgac cggcctcgcc tcctttaggg ttctccacct tggcgatgtc ggcccccatc
     1561 caggcaagcg cctcggtgca ggtcgttccg gcctcgaact gcgtcagatc gagcacgcga
     1621 atgcccgaca gacagccggg agacatcggg gttacgtcca tctgagactc ctgttttgcg
     1681 ggacattgtg accgtcacgg aacgtggcgg tttcagcacg aactcaaggc gcgagtagta
     1741 taccgaaccg gcaaaacgac actgccaggt gaatcagatc gcactaccaa ttcacgccac
     1801 tgacaacccc agaggacgag gtccccacaa tcattccttc gtaggccatt gtttctctcc
     1861 cctgccggtg cgaaacccct ttcgttgcca gcgatgatag ctgccgttgt tggggaatca
     1921 agcgacccga actccacgag ccaaacgatg caagtttact tcaccagcga ccaccacttc
     1981 ggccactccg gcgcgcgaag cctgtaccgc cgcccgtttg catcggttgc tgaaatggat
     2041 cagcaaatgg tcgtccgctg gaattcgatc atatcgccca aggacgaggt ttggcatctg
     2101 ggcgacttcg ccgttcgcca ggcgcgagaa cgtgtgagtt ccctgctgag cgaactgcat
     2161 ggccagaagc atcttatcgc gggcaacaac gacgatgccg ccgtcactga gtgtgccggc
     2221 tggaaaagtg ttcaatctta cgcggaactc accgtcgacg gaacgaggct tattctctgt
     2281 cattatccat tccggacctg gcgagacatg ggaagaggct cgctcaacct ccacggtcat
     2341 agtcacggca ggctaaaacc gcagccgcgt cagttcgacg tcggcgtgga tgcgcgggcg
     2401 ttttgtccgg tacgtcttct ggatctgatc aaaccgccga ggccgcattg tcgcgcatga
     2461 gcagcgcctg tgtcggacga tgatactact ccctgaccga gtggcgatca ctcacgcagc
     2521 atcgcgcccc acggtcagcg caccgaaccc aatgccaggc accagttcgt cataaagcgc
     2581 cagataatgc tgtgccgccg tatgccaact gaaatcgcgt cgcatcgcgg tccgctgcat
     2641 ccgctgccag gtttcccggc tggcaaaccg cgcacgtgcg cgatccaggc cggccagcaa
     2701 accggacgca caatcacctt cgaagttgaa cccggtcgca tcgccaccgg gctccgccgc
     2761 atcgccggca tccacgacgc tgtcggcaag accaccaacc ggccggctta ccggcagtgc
     2821 gccgtaacgc atggcgtaca acgccgtcag cccacatggc tcgaaccgag atggtaccaa
     2881 cgagatgtcc gctccggcgg tcagccggtg tgcaaaactc tcctcgtagc ccacccgaag
     2941 cacgacctga ggcgactgtc ccatctgtgc tgcaaacgcg ttctcaaggt ctgggtcacc
     3001 ttgaccatga agaacgaact ggatgccgcg atctgccatc gccggaagca gctcaaggac
     3061 tccttcggcc attttttgat gcgtcagtcg gttgacgaaa caaatcagcg gcgattctga
     3121 cgtcggttca agcccgagtt cctgctgaag cgctgccttg caggcgcgtt tgccgcccag
     3181 gtcccgtgcc gtgtagtgcg aggccaggta tggatcgctc tccgggttcc acacatcggc
     3241 gtcgacgcca tt
//
LOCUS       DATAVD010001588         1918 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2757384, whole genome shotgun sequence.
ACCESSION   DATAVD010001588 DATAVD010000000
VERSION     DATAVD010001588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1918
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2757384"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..1265)
                     /gene="ugpC"
                     /locus_tag="VHX39_30410"
     CDS             complement(153..1265)
                     /gene="ugpC"
                     /locus_tag="VHX39_30410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007089384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HEX3995507.1"
                     /translation="MAALSVRDVSKQFAHHEVLKRINLDIESGEFAVLVGPSGCGKST
                     LLNIIAGLERASAGTIEIGGRVVNDIAPKDRDIAMVFQSYALYPSMTVRQNITFGMEC
                     RHVPKTRQREALASVARLLQIEQLLDRRPSQLSGGQRQRVAMGRALVRDPLLFLFDEP
                     LSNLDAKLRVEMRMEIKQLHQRIGATIVYVTHDQIEAMTMATRIAVMNQGQVQQFADP
                     DTVYRYPANLFVAGFMGSPPMNTMPARIMVDDDTMVAVVGPGEGAVRLRLVRYEAAAA
                     WIGREVVLGIRPECIAEADRLFAGTADAPVVVDAPVEMIEPTGAETIVLLRLGGTPVL
                     ARISPDIRPVPGERAKFALDTSRICLFDKETERLIA"
     gene            complement(1276..>1918)
                     /locus_tag="VHX39_30415"
     CDS             complement(1276..>1918)
                     /locus_tag="VHX39_30415"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEX3995508.1"
                     /translation="WGIEPYMRNSLEIAIPATIVSTLLGALAGYSITLWRFRGDQIVF
                     GVVTLGVFLPEQMKLIPWVVVLRDLSLMNTIGGLILIHTVQGMSFTTLFCRNYYLGIP
                     ADLLKAARIDGAGFFRIFWRIVLPLSPPILVVTVIWQFTGIWNEFLFGVTFTSGSQQP
                     VTAALIALSAVITSEPMYGVQSAAVLIAALPTLLVYLFGGRYFLRGLTAGAVK"
BASE COUNT          428 a          627 c          526 g          337 t
ORIGIN      
        1 caagggctgc gtttgcgcat ggcgaggtaa ccggcggcgc caatcaggtg accccccgga
       61 agcatccgtg ggtctgagat gcggtcccgg caccagcgtt aaattcacta actggcccat
      121 gcaccatagt gcaacctcaa aagccgactg ccttatgcga tcagccgttc agtctccttg
      181 tcgaacagac aaatccggct tgtatccagc gcgaattttg cccgctctcc gggtaccggc
      241 cggatgtcag gagagatcct cgccagcacc ggcgttccgc caagccgcag caacacgatc
      301 gtctcggcgc ccgtcggctc gatcatctcg accggagcgt ccaccacaac gggcgcatcc
      361 gcggtgcccg caaacaagcg gtcggcttcg gcgatgcatt ccggccttat gccaagcacg
      421 acctcacgcc caatccaggc cgcagccgcc tcataccgca ccaaccgaag ccgcaccgcg
      481 ccctcccctg ggccgaccac cgccaccatc gtgtcatcgt caaccatgat ccgtgccggc
      541 atcgtgttca ttggtggcga acccatgaag ccggcaacga acagattggc ggggtagcga
      601 tagactgtgt ccggatcggc gaactgctgc acctgcccct gattcatcac ggcgatccgc
      661 gtggccattg tcatcgcctc aatttggtcg tgcgtgacgt agacgatcgt cgcccctatg
      721 cgctgatgca gctgcttgat ctccatccgc atttccacgc gcagcttcgc atccagattg
      781 gacaacggtt catcgaacag aaacagcaac ggatcccgca ccaaagctcg acccatcgcc
      841 acgcgttgac gctgaccacc ggaaagctgt gacggccgcc ggtcgagcag ttgttcgatc
      901 tgcaacagcc tggcgacgct cgccaacgct tcgcgctgac gagttttcgg cacgtgacgg
      961 cattccatgc caaacgtaat attttgccgg actgtcatcg atggatacag cgcataggac
     1021 tggaacacca tcgcgatgtc acggtccttc ggcgcgatat cattgaccac acgcccgccg
     1081 atttcgatgg tgccagcact ggcgcgctcc aaaccagcga tgatgttcaa cagagtggac
     1141 ttgccacagc ctgatggccc gacaagcacc gcgaattcac cgctctcgat gtcgagatta
     1201 atccgcttca gcacctcgtg atgagcgaac tgtttcgaca cgtcacgaac gctcaacgcc
     1261 gccattttgc aaccttcact tcaccgcacc cgcggtgaga ccacggagga aatagcggcc
     1321 gccgaacaag tacaccagaa gcgtgggtag agccgcgatc agcacggcag cactttgcac
     1381 cccatacatc ggctcgctgg tgatcacggc gctgagcgcg atcagtgccg cagtaaccgg
     1441 ctgctggcta cccgaggtga acgtcacacc gaacaggaac tcgttccaga tgccagtgaa
     1501 ctgccagatc acagtcacca ccaggatcgg cggcgacagc ggcaatacga tccgccagaa
     1561 gatccggaaa aagccggcac cgtcgatccg cgccgccttc agcaggtcgg ccgggatgcc
     1621 gaggtaatag ttgcggcaaa acaatgtcgt gaagctcatg ccctgcacgg tgtggatcag
     1681 gatcaggccg ccgatggtgt tcatcagcga cagatcgcgc aatacgacga cccagggaat
     1741 cagcttcatt tgctcgggta gaaagacgcc gagcgttaca acgccgaaca caatttgatc
     1801 gccccgaaac cgccaaagcg tgatcgaata gccggcgagc gcaccaagca aggtggaaac
     1861 gatcgttgcg gggatcgcga tttcgagcga attgcgcatg tacggctcga tgccccag
//
LOCUS       DATAVD010001589         4461 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2574182, whole genome shotgun sequence.
ACCESSION   DATAVD010001589 DATAVD010000000
VERSION     DATAVD010001589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4461
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2574182"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..702
                     /locus_tag="VHX39_30420"
     CDS             121..702
                     /locus_tag="VHX39_30420"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEX3995509.1"
                     /translation="MSKPPADKLHPVAFWFLRHGETDWNTKDLSQGAVDIPLNETGLA
                     QARSASLLLRGKGIRHLISSPLSRARVTAEIAGAELGLPVQIDDGLREVSFGVQEGKP
                     MADWGFQQWVDGLLTPEGAESFPALTARAVAAVNRCIARPPVVLVVGHGALFRALRGA
                     MGHEPNVRTRNAVPVWCEPPTDGSARWGVTYAD"
     gene            complement(718..1902)
                     /locus_tag="VHX39_30425"
     CDS             complement(718..1902)
                     /locus_tag="VHX39_30425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995510.1"
                     /translation="MWDNRCKIAVSGVGYSKVSRSADIPLAAHALTAVKEAVADSGLE
                     MSDIDGLATYPELPATGHAEIDGISVVSVNCMMAMLKLPALTWHIQVGTTNIGGAVQQ
                     AVNALLAGVCKYAVVWRAMHNPSGTYQNLPGAQAQGATQFTAPYGFGGPGQGMAVAYT
                     RWLERNNQSRDKMATLAVTQRRHTQHNPHAWFYGTPLTREDYFASRMVAYPFCLFDCD
                     IPVQGAVAIVLTIAERARDLKPKPAYIAGYGQRLHFETAGRIGSLSSYMEGGSSSAKL
                     TWERSGFTPKDVDVAQIYDGFSASVIYGLESYGFCKEGEALDFIQDGRIELDGELPLN
                     TFGGSLGTGRIHGLWHIIEGALQASGRAGSRQVKDANVSFVGASAPIVTGTTFIFVGD
                     PY"
     gene            complement(1916..2341)
                     /locus_tag="VHX39_30430"
     CDS             complement(1916..2341)
                     /locus_tag="VHX39_30430"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HEX3995511.1"
                     /translation="MSDWSKVTRPIPVPNEWTRPFWDAARRNALELQRCQSCGHFQHP
                     PYATCVQCMGIDLKFEPVRGAGAIYAYTIMYHTGDKRFAAAVPYATIVVELDDAPGAL
                     LAGNLLEADYTEAKVGRRVEVIFEKLNDDITLPQFRLAV"
     gene            complement(2356..3564)
                     /locus_tag="VHX39_30435"
     CDS             complement(2356..3564)
                     /locus_tag="VHX39_30435"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3995512.1"
                     /translation="MTAPAKGQPAGPLQGYRILDLTSVLFGPFGTQTLGDWGAEVIKI
                     ESLTGDTWRNSGQFRNRGMTGQFMAVNRNKRSLALDLKHPDGKAVLRRLIATADALVS
                     NIRPAGLTRLGFSYETCKELNPKIIYAVATGFGQDGPWRARPAFDEIIQAASGFASAM
                     GTDEEPAFVPSLIGDKICGMALTSAVTAALLHRERTGEGQMVEVPMLETLAAFNSIEM
                     FGGHAFIPPIGPSGYKRMKARRPVRTKDGWLTMLPYSGENWCAFFEAVGHPDCIEEFS
                     VRDPVLRARNIDKIYDRMRDIAPTRTTAEWEELLLRIDVPHTSFTKLTEVAEQPHLKA
                     VGLFQEVDHPTEGKIRQARPPARFSASPAEVRRPAPLLGEHTREVLREAGYTPAEIDS
                     LIENKAIGAA"
     gene            complement(3657..>4461)
                     /locus_tag="VHX39_30440"
     CDS             complement(3657..>4461)
                     /locus_tag="VHX39_30440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nitrite reductase large subunit"
                     /protein_id="HEX3995513.1"
                     /translation="RSRFVNERMHANIQKDGTYSVIPRLWGGTATPGELAAIAAVANR
                     YNVAEVKITGGQRLGLYGIRKQDLPAVWSELTDAGLVSGHAYGKSLRTVKTCVGLEWC
                     RFGTQDSTTLGKMLERLTWGNWTPHKFKMGVSGCPRNCAEASIKDFGVICVESGFDLL
                     VGGNGGIELRGTDKLCHVATEAEVLEYAAAFMQLYREEARYLDRTAPWIERVGIDYVR
                     KRIVEDTAGRHALQERFRIAQSYLQTDPWAERGKRGVDAHEFTPLAVLG"
BASE COUNT          692 a         1338 c         1565 g          866 t
ORIGIN      
        1 agttctggtc gaagcgggtg ggcatgactt taccggcgaa ctgtgccgcg catttcgaac
       61 gcatgctggc gcgtccgtcg gtccagcggg tgatgcaaca ggaaggcttg gcctgatccc
      121 atgagcaaac cccctgctga caagctgcat cccgtcgcgt tctggttcct gcgccatgga
      181 gagacggact ggaacacgaa agatctgtcg cagggggccg tcgatattcc cctgaatgag
      241 accgggctgg cgcaggctcg gtccgcctca ctgttgctgc gggggaaggg gattcggcac
      301 ctgatctcct cgccgctgtc gcgcgcccgg gttaccgccg aaatcgccgg cgccgaactt
      361 ggcctgccgg tgcagatcga cgacgggctg cgggaagttt cgttcggtgt ccaggaaggc
      421 aagcccatgg ccgactgggg gtttcagcaa tgggtcgatg gcctgctgac gcccgagggc
      481 gccgaaagtt ttccggcgct gacagcccga gcggtggctg ccgtcaaccg ctgtatcgct
      541 cggcctcccg tggtgctggt ggtggggcat ggcgcgctgt tccgggcgct gcgcggcgcg
      601 atggggcacg agccgaacgt gcgcacccgg aacgcggtgc cggtgtggtg tgagccgccg
      661 acggacgggt cggcgcgttg gggggttacc tacgcggatt gaaggtgatc cgaacggtta
      721 atacggatcc ccgacaaaga tgaaggtcgt gccggttacg atcggcgcgc tcgccccgac
      781 gaaggagacg ttggcgtctt tgacctggcg tgagcccgcg cgtcccgacg cttgtagtgc
      841 gccttcgatg atgtgccaaa ggccgtggat gcggccggta cccaggctgc cgccaaatgt
      901 gttcagtggc agttcgccgt cgagctcgat gcgtccgtcc tggatgaaat ccaacgcctc
      961 gccttccttg cagaatccgt acgactccag gccgtagatc accgaagcgg agaagccgtc
     1021 gtagatctgc gctacatcca cgtccttcgg ggtgaagccg gaccgttccc aggtcagctt
     1081 ggcggaactg ctgccgcctt ccatgtagct ggacaggctg ccgatgcggc cggccgtctc
     1141 gaaatgcagc cgttggccgt agccggcgat ataggcgggc ttcggcttca ggtcccgcgc
     1201 ccgctccgcg atggtcagca cgatggcgac ggcgccttgc accgggatgt cgcaatcgaa
     1261 caggcagaac ggataggcga ccatgcggga ggcgaagtaa tcctctcgcg tcaggggcgt
     1321 gccgtagaac caggcgtgcg gattgtgctg ggtgtggcgg cgctgggtca cggcgagggt
     1381 cgccatcttg tcgcggcttt gattgttacg ctccagccag cgtgtatagg cgactgccat
     1441 gccctggccg ggaccgccga agccataggg cgcggtgaac tgcgtggcac cctgagcctg
     1501 cgcgccgggc aggttctgat aggtgccgct ggggttgtgc attgcccgcc acaccaccgc
     1561 gtacttgcac acgccggcga gcaacgcgtt caccgcctgt tgcacggcgc cgccgatatt
     1621 ggtcgtgccc acctggatgt gccaggtcag cgcgggcagt ttcagcatcg ccatcatgca
     1681 gttgaccgaa acgacagaga tgccgtcgat ttcggcgtgc ccggtcgccg gcagttcggg
     1741 gtaggttgcc agaccatcga tatccgacat ctccagcccc gagtccgcca cggcctcttt
     1801 caccgcggtc agcgcatgtg ccgcgagcgg aatgtcggcg gagcgggaga ccttggaata
     1861 gcccacgccg ctgacggcga ttttgcaacg attgtcccac atgcgatttc tccccctaaa
     1921 ccgcgagacg gaattgcggc agcgtgatgt cgtcgttcag tttctcgaag atgacttcga
     1981 cccggcggcc gacctttgcc tcggtgtagt ccgcttccag aaggttgccg gcgagcagcg
     2041 cgccgggtgc gtcatcgagt tccacgacga tggtggcgta cggcacggcg gcggcgaagc
     2101 gtttgtcgcc ggtgtgatac atgatggtgt aggcgtagat cgcgccggcg ccgcgcacgg
     2161 gttcgaactt caggtcgatt cccatgcatt ggacacaggt tgcatagggc ggatgctgga
     2221 agtggccgca actttggcaa cgctgcagtt ccagtgcgtt tcgcctggcg gcgtcccaga
     2281 atggcctggt ccattcgttg gggaccggga tcggtcttgt taccttgctc cagtcggaca
     2341 ttgtgttcct ccgttttatg cagcgccaat cgctttgttt tcgatcaggc tgtcgatctc
     2401 ggccggtgta tagccggctt cacgcaagac ctcgcgggtg tgttcgccga gcaagggtgc
     2461 cggacgacga acctcggcgg ggctggcgga aaaccgagcg ggcgggcggg cctggcggat
     2521 tttgccctcg gtggggtggt ccacttcctg gaacaatccc accgctttca gatgcggctg
     2581 ttcggcgacc tcggtcagtt tcgtgaagga cgtgtgcggt acgtcgatgc gcagcagcag
     2641 ttcctcccat tccgccgtgg tccgggtggg tgcgatatcg cgcatccggt cgtatatttt
     2701 gtcgatgttc cgagcgcgta acaccgggtc gcggacggag aattcctcga tgcagtcggg
     2761 atgtccgaca gcttcgaaga aggcgcacca gttttcgccg gaatagggca gcatggtcag
     2821 ccagccgtcc ttggtgcgga cggggcggcg ggccttcatg cgcttgtagc cggatggccc
     2881 gatgggcggg atgaaggcat ggccgccgaa catctcgatg ctgttgaagg cggccagggt
     2941 ttccagcatg gggacttcca ccatctggcc ctcgccggtg cgttcgcggt gcagcagcgc
     3001 ggcggtcacg gcggaggtca gcgccatgcc gcagatcttg tcgccgatca ggctgggaac
     3061 gaaggcgggc tcctcatccg tgcccatggc ggaggcgaag ccggacgccg cctggatgat
     3121 ctcgtcgaag gcgggacgcg cgcgccaggg gccgtcctgg ccgaagccgg tggcgaccgc
     3181 gtagatgatc ttcgggttga gttccttgca ggtctcgtaa ctgaaaccga ggcgggtcag
     3241 gccggcgggc cggatgttgc tgaccagcgc gtcggcggtg gcgatcagcc ggcgcaatac
     3301 cgccttgccg tcgggatgct tcaggtcgag cgccaggctg cgcttgttgc ggtttaccgc
     3361 catgaactgg ccggtcatcc cgcgattgcg gaactggccg gagttgcgcc aggtgtcgcc
     3421 ggtaaggctt tcgatcttga tgacttcggc gccccagtcg cccagggtct gggtgccgaa
     3481 cgggccgaac agcacactgg tcaggtcgag aatgcggtag ccttgcagcg gcccggctgg
     3541 ctggcccttc gcgggtgcgg tcatcgtggt ttggtccctt ggtcggttcc gccccagagt
     3601 aagcaaagtg gtggggcgtg gcgacagggg cggacctggg gatggccgtc agggggttat
     3661 cccagcacgg ccagcggggt gaattcgtgg gcgtcgaccc cgcgtttgcc gcgttcggcc
     3721 caggggtcgg tttgcagata gctttgcgca atacggaagc gctcctgcag ggcgtgccgg
     3781 ccggccgtgt cctcgacgat gcgcttgcgc acgtagtcga tgccgacccg ctcgatccac
     3841 ggtgcggtgc ggtccaggta gcgggcttcc tcgcggtaaa gctgcatgaa ggcggcggcg
     3901 tattccagca cctcggcttc ggtcgcgacg tggcacaatt tgtcggtgcc gcgcagttcg
     3961 atgccgccgt tgccgccgac cagcaggtcg aagccggatt cgacacagat cacgccgaaa
     4021 tccttgatcg atgcttcggc gcaattgcgg gggcagccgg agacgcccat cttgaacttg
     4081 tgcggcgtcc agttgcccca ggtcagccgc tccagcattt tgcccagggt ggtggaatcc
     4141 tgagtgccga accggcacca ttcgagtccg acacatgtct tgacggtgcg tagcgatttt
     4201 ccgtaggcgt ggccggatac caggccggcg tcggtcagtt cactccagac cgccggcagg
     4261 tcctgcttcc tgatgccgta gaggccgagg cgctggccgc cggtgatctt cacctccgcc
     4321 acgttgtagc ggttggcgac ggcggcgatg gcggccagtt ctccgggggt cgcggtgccg
     4381 ccccacaggc gggggatcac cgagtaggtg ccgtctttct ggatgttggc gtgcatgcgc
     4441 tcgttgacga agcgggaccg g
//
LOCUS       DATAVD010001590         2013 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2011884, whole genome shotgun sequence.
ACCESSION   DATAVD010001590 DATAVD010000000
VERSION     DATAVD010001590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2011884"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            544..1638
                     /locus_tag="VHX39_30445"
     CDS             544..1638
                     /locus_tag="VHX39_30445"
                     /inference="COORDINATES: protein motif:HMM:NF015368.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995514.1"
                     /translation="MNFRTALASIAAAALILATPAAAHIAGECHLTADEPSAAVRNAD
                     HSPTLRITVWYPTTDTAHPEPIDIGPPGQPLFRVGDAAPNAPFAPGRRRPVILLSHGF
                     GGTARMMGWFGVPLAKDGYIVISVDHPGNNGRDRMTVPGAILPWERAEDLKLALRTVG
                     NDTAIGPHMDLTRLAAAGFSAGGFTALVLGGAKADPNRLMAFCDRNPNDGLCRPQVEF
                     TVTKADRTQALQDPEVAASEARAEDDHSLASIKAIFAMAPALIQGIQPHSLEAIGRPV
                     SIVAGDADTVAAPASNAQVAAHLVPNAKLDLVPGVGHYAFLSTCTPVGLAKAKICKLA
                     GPQEAAHRLAIARAEDLFSRTLLKPDASTR"
     gene            complement(1653..>2013)
                     /locus_tag="VHX39_30450"
     CDS             complement(1653..>2013)
                     /locus_tag="VHX39_30450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX3995515.1"
                     /translation="LAGDAAHGIHPIAGQGLNLGFRDGITLAELIEAAVRVGEDVGGA
                     ALLGRYQRVRQADNLVMFGMTDGLDRLFSTDRRLVRVARDLGIGAVDRLGPLKRVFMR
                     RAMGVASSASASAGVSG"
BASE COUNT          408 a          744 c          557 g          304 t
ORIGIN      
        1 cgctttcgtg taatattccg ccgaaagact gacacccgac gttgggaaga acacaatgcg
       61 ggaaaaccga ccgtcatcgg catgacagga tggtcactga cggagtctcg tccgcaattc
      121 gaactggtgc aatctgtaag ctcaatccga tggatttacc ttggaggcgg cggttgaacg
      181 cagtacccgc acgtcatcgc cgggtgccgg cgatggagcg cgtcttttca gtaaggggac
      241 aatcccctaa cgaagtccga gaaagctcag gacggcggcg acgacgacca cgagaccgat
      301 aatgtagata atgctgttca tacgcatgct ccctgttgtg gcatgatgcc gatcgagaca
      361 gggaccagaa cccatgggcg ggcgtaacgt tgcttcaaca accggtgtgc gccggcttcg
      421 atgtgcggtt gggactgggg gcggaaggcc cggcgtgtcc tggctgtcgc tggcttgtcc
      481 cggccatctg cgcacggcag gatggaaacg aaagacgatg acggaaccgc aaggaatcgc
      541 ggcatgaact tccgaaccgc cctggcatcc attgcagccg cggcgctcat cctggcaacc
      601 ccagccgccg cccacatcgc cggagagtgc cacctcaccg cggacgaacc ctccgccgcc
      661 gtccgcaatg ccgatcacag ccccacgctc aggatcaccg tctggtatcc cacgacggat
      721 accgcccacc ccgagcccat cgacatcggc ccacccggcc agcctttgtt ccgagtcggc
      781 gacgcagccc ccaacgcccc attcgcccca ggccgtcggc gcccggtgat cctgctgtcg
      841 cacggcttcg gcggcacagc ccgcatgatg ggatggttcg gagtccccct tgccaaggac
      901 ggctacatcg tgatttcggt cgaccaccct ggcaacaacg gccgcgatcg catgaccgtg
      961 cccggcgcga tcctgccatg ggaacgcgcc gaggacctga aactggcgct gcggaccgtc
     1021 ggcaacgaca cagccatcgg tccccatatg gacctgacca ggctggcagc ggccggtttc
     1081 tccgccggcg ggttcaccgc cctcgtgctg ggcggcgcaa aagccgaccc taaccgtctt
     1141 atggcattct gcgaccgaaa tccgaacgac ggcctatgcc gaccgcaagt cgagttcacc
     1201 gtaaccaagg cagatcgaac ccaagcactg caagacccgg aggtcgcggc gtcggaagcc
     1261 cgcgccgagg acgatcattc actcgcatcg atcaaagcca tcttcgccat ggcgcccgcc
     1321 ctgatccaag gcatccagcc gcacagcctc gaagcaatcg gacgacccgt ctcgatcgtc
     1381 gccggagacg ccgacaccgt ggctgccccc gccagcaacg cccaggtcgc cgcccacctc
     1441 gttccgaatg ccaagctgga cctggtcccc ggcgtcggcc actacgcgtt cctgtctacc
     1501 tgcaccccgg ttggcctggc caaggccaaa atctgcaaac tcgccggccc gcaggaagca
     1561 gcccatcgcc tggccatagc gcgagcggaa gacctctttt cccgtaccct gctcaagccg
     1621 gacgcctcca cacgataagc tcggccctgg atttatccgg aaaccccagc ggaagccgag
     1681 gctgacgacg ccacccccat cgcccgccgc atgaacaccc gcttcagcgg acccaaccgg
     1741 tccaccgccc caatccccaa atccctggca acccggacca accgccgatc ggtgctgaac
     1801 agccggtcga gcccatccgt catcccgaac atcaccaaat tgtccgcctg ccgcacccgc
     1861 tgataccgcc ccagcagcgc cgccccgcca acatcctcac cgacccgaac ggccgcctcg
     1921 attaactcgg ccagggtgat cccgtcgcga aaccccaaat tcagcccctg cccggcgatc
     1981 gggtgaatcc catgcgccgc atcccccgcc aga
//
LOCUS       DATAVD010001591         2879 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_336306, whole genome shotgun sequence.
ACCESSION   DATAVD010001591 DATAVD010000000
VERSION     DATAVD010001591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2879
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_336306"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1732)
                     /locus_tag="VHX39_30455"
     CDS             complement(<1..1732)
                     /locus_tag="VHX39_30455"
                     /inference="COORDINATES: protein motif:HMM:NF013123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DPP IV N-terminal domain-containing protein"
                     /protein_id="HEX3995516.1"
                     /translation="MPENTALKMMVRGLACLPLFCAAAGVAQQPRQYTEQGYREAEGF
                     MAYNVNHLAYKGQVKAEALDDGRFWYRAVDDSGIVYTLVDPAKGTRGAMFDQQKLAAL
                     LKAGSQGAVDMDAHHLLLSDIALSDGDHVVTFTVHGAIYRCSLGGEPESCKPLLPPAE
                     SEPEHTASHPASHPPLNLSPDKKLGAFIRDWNLWVRDMATGAETQLTTDGVKDYGYAT
                     DNAGWKSSDAAILLWSPDSAKIATFQQDQRKTGEMYLVPVTNTHPDLKAWKYPLVGDK
                     DVTMIERVVIDVNARKVVRLKMPPDQHRSTLCDDVACQGTTWSDVEWSPDGAHLAFVS
                     TSRDHKQEWLRVADTATGDVRQVMSETAPKFFESGNDKINWHYLPASNEILWFSERDN
                     WGNLYLYDLATGKLKNQITHGPGNVTQVLYVDQPARTIYFVGVGKVADLDPYFEQFYS
                     VHFDGSGLRRLTAENADHSITMASDGRYFFDTYSTPTEPQVTVLRDRAGKVVMDVAHQ
                     DISALGAAGWAPPVPIKVKGRDGATDLYGFMFKPTHFEDMHKYPVVDLVYPGPQTGSC
                     GGRGFRAAHGD"
     gene            2034..>2879
                     /locus_tag="VHX39_30460"
     CDS             2034..>2879
                     /locus_tag="VHX39_30460"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YpdA family putative bacillithiol disulfide
                     reductase"
                     /protein_id="HEX3995517.1"
                     /translation="MSDVPVEMLPSEHPHSIPEEQDRQSADTVFDLLVIGAGPTGLAC
                     AIEAQRAGLRAVSVDKGCVCNSLFHYPSHMTFFTTSELLEIGEIPFPSPNAKPNRNEA
                     LEYYRQVAAFYKLDIRQYHRVERVEGADGAFAVHTLDRFGRPGMLKTRKLAVATGYYD
                     LPNYLAIPGEDLSKVHHYYDDPHPYFGMDVAVIGGKNSAAIAALELWRHGARVTLVHR
                     ESGIHRHVKYWIKPDIENRIKNGEIRAFFETNVAEITPDSVVLETPAGRAVLRNDFVF
                     AMTGYR"
BASE COUNT          571 a          823 c          901 g          584 t
ORIGIN      
        1 tatccccatg cgccgccctg aatccacggc ctccgcaaga tccagtctgc gggccagggt
       61 acaccagatc aacaaccggg tatttgtgca tgtcttcaaa gtgcgtgggc ttgaacatga
      121 agccgtagag gtccgtggcg ccgtcgcgcc ccttcacctt gatgggcaca ggaggcgccc
      181 agccggccgc acccagggcg gagatatcct gatgcgcgac gtccatcacg accttgccgg
      241 cgcggtcacg caaaacggtg acctggggct cggtcggcgt ggagtaggtg tcgaagaagt
      301 agcggccgtc cgacgccatc gtgatgctat gatccgcatt ttcagccgtc aggcggcgca
      361 gaccgctgcc gtcgaagtgc acgctgtaaa actgttcgaa gtaaggatcg agatctgcta
      421 ctttgccgac accgacaaag tagatggtgc gcgcgggctg atcgacatag agcacctggg
      481 tcacgttgcc tggcccatgg gtgatctggt tcttgagttt tccggtggca aggtcataga
      541 gatagagatt gccccagttg tcgcgctcgc tgaaccagag gatctcgttc gaggcgggca
      601 ggtaatgcca attgattttg tcgttgccgc tctcaaagaa cttgggcgcg gtctcggaca
      661 tcacctgcct gacgtcacca gtcgcggtat cagccactcg cagccactcc tgcttgtgat
      721 cccgcgaggt ggacacgaag gcgagatgcg cgccgtccgg actccactcg acgtctgacc
      781 aggtcgtgcc ctggcaggcc acgtcgtcgc acagggtcga tcgatgctga tcgggcggca
      841 tcttgagccg caccaccttg cgggcgttca catcgatgac gacgcgctca atcatcgtga
      901 cgtccttatc cccgaccagg ggatacttcc atgccttgag gtccggatga gtattggtga
      961 cgggaaccag gtacatctcg ccggttttgc gttgatcctg ctggaaagtg gcgatcttgg
     1021 ccgagtccgg ggaccagagc agaatcgccg cgtcggaaga cttccaaccg gcgttgtccg
     1081 tggcgtagcc gtaatccttt accccgtcgg tggtgagttg cgtctctgcg ccggtcgcca
     1141 tatctcggac ccacaggttc caatcgcgga tgaaggcgcc cagtttcttg tcgggggaga
     1201 gattcaaagg cgggtgagaa gcgggatgcg acgctgtatg ctccggctcg ctctcggcgg
     1261 gcggcaggag gggcttgcag gattccggct cgccgccgag gctgcatcga tagatcgcgc
     1321 cgtgaactgt gaacgtcacg acatgatccc cgtcggagag cgcaatgtcg gagagcagca
     1381 ggtgatgggc atccatatcc acggcgcctt gggaacctgc cttgagcagg gcggccagtt
     1441 tttgttggtc aaacatggct ccgcgcgtcc ccttggcagg atcgacgagg gtgtaaacaa
     1501 tgccgctgtc gtcgacggcc cgataccaga atcgcccgtc gtccaatgcc tcggccttca
     1561 cctgcccctt gtaggcgagg tgattgacgt tgtaagccat gaatccttcg gcttcgcggt
     1621 agccctgttc ggtgtactgc ctgggctgtt gtgccacgcc ggcagcagcg caaaacaggg
     1681 gcagacaggc aagacctcgc accatcattt tcaaggcagt gttctcaggc atgtttggat
     1741 tcctctcgca tcgatcgctg gggagacgaa caggtgcagg tacagttttg gttggggaaa
     1801 ttgatgtggg tgcggcactt tgcacgcacc gagaggctga accctctgcc cttattgacg
     1861 atacaacggc ggtaagaccc gcacagtgtg gttcgcgccg gaagttgagg gtgtgcgagg
     1921 ccatcccaag aggtcctctt gaagtgacgt ttagaccttt ctgccagcgc cttccaccag
     1981 tccaccatga ccggcttgtc atgaaccatt ggaagatgcc ctaagctata agaatgagcg
     2041 acgttcccgt tgaaatgctg ccgtcggagc atccgcatag tattcctgag gaacaagaca
     2101 ggcaatcggc agatacggtc ttcgacctgc tggtgatcgg agcgggtccg actggcctgg
     2161 cgtgtgcaat cgaggcgcag agggccggat tgcgcgcggt atcggtagac aagggctgtg
     2221 tgtgcaactc gctgtttcac tatccgtccc acatgacgtt tttcactact tcagaactgc
     2281 tggagatcgg cgaaataccg tttccgagcc cgaatgccaa accgaaccgc aacgaagcgc
     2341 tggagtatta ccggcaggtg gcggcgttct acaaactgga catccggcag taccaccggg
     2401 tcgagcgggt ggagggtgcc gatggggcat ttgcggttca cacgctggac cggttcggtc
     2461 ggccgggaat gttgaagaca cgcaagctgg cggtcgccac gggatactac gatctgccca
     2521 attacctggc cattcccgga gaagacctga gcaaggtgca ccactactac gacgatccgc
     2581 acccatattt cggtatggat gtggcggtga tcgggggcaa gaattccgcg gcgattgcgg
     2641 ctctggaact ctggcgccac ggcgcccggg tcacgctggt gcaccgtgag agcggaattc
     2701 accggcacgt caagtactgg atcaagccgg acatcgaaaa ccgcatcaaa aacggcgaaa
     2761 tcagggcgtt tttcgagacg aatgtggccg aaatcacgcc ggattcggtg gtcctcgaaa
     2821 caccggccgg ccgcgcggtc ctgcgcaacg acttcgtctt cgccatgacc ggttacagg
//
LOCUS       DATAVD010001592         5302 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1824734, whole genome shotgun sequence.
ACCESSION   DATAVD010001592 DATAVD010000000
VERSION     DATAVD010001592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5302
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1824734"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..401
                     /locus_tag="VHX39_30465"
     CDS             <1..401
                     /locus_tag="VHX39_30465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008854466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995518.1"
                     /translation="IKHANVGLKTQVDDAETTPLRHPEHYKYDIDVAQVAEVWRRGSV
                     VASWLLDLAASALRKSPDLEGFAGRVSDSGEGRWTVTAAVDESVPSPVISAALFARFS
                     SRGEADYGDRLLSALRFEFGGHVEKPKEGH"
     gene            497..1579
                     /gene="tal"
                     /locus_tag="VHX39_30470"
     CDS             497..1579
                     /gene="tal"
                     /locus_tag="VHX39_30470"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF002881.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEX3995519.1"
                     /translation="MASDAPKALNTLGQSLWLDNITRDLLDSGTLKRYIDELSVTGLT
                     SNPTIFDNAISRSSWYDAEIRKQLESGASGEKLFFTLAVQDLSRAAELFLPVYHRTGS
                     VDGFVSLEVSPVFAYDTKATVEQAKTLHAQANKPNLFIKIPGTPEGLPAITEAIFAGV
                     PVNVTLLFSTDQYKAAAEAYMQGLEKRVAAGLSADVRSVASLFLSRWDVAVTDKVPAD
                     LRNTLGLAVGRQAYKAYRDILESDRFQRLENVGARPQRLLFASTGTKDKNASDTLYIE
                     GLAAPNTVNTMPEGTLLAFADHGKTATALSRDGGDAEAILAKHIKAGIDLTALSTQLQ
                     SDGAKGFVKSWHELLGAIESKSKVLA"
     gene            1596..3218
                     /gene="pgi"
                     /locus_tag="VHX39_30475"
     CDS             1596..3218
                     /gene="pgi"
                     /locus_tag="VHX39_30475"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEX3995520.1"
                     /translation="MTALTESPAWRALTTHHAQIKDAHLRDLFAKDPDRAKRLSTEGA
                     GLFLDYSKNRVTDETLRLLLQLADERGVAKRRDAMFAGDKINTTERRAVLHVALRAPR
                     GTVIEVDGADVVPDVHKVLDAMADFATRLRSGAFTGHTGKRIRNVVNIGIGGSYLGPE
                     MAYRALRPFSDRSMTFRFVANVDGADFHEATLGLDAAETLFIVSSKTFTTLETMTNAA
                     TARAWLVGKLGSDAAVAKHFAAVSTNIPGVTKFGIDPANTFGFWDWVGGRYSMDSAIG
                     LSTMLAIGPDNYRAMLAGFHAMDEHFRTAPPAANLPMLMGLLTVWYNNFFGAQTLGVM
                     PYSAHLARLPAYLQQLQMESNGKHVDLDGHVVNYQTGPIIWGEPGTDGQHSFYQLLHQ
                     GTKLVPCDMIGFCKPLSPLTEQHDLLMANLFAQAEALAFGKTEQELKAEGSPDFQRPF
                     RVMQGNRPTNMILAEKLDPATLGAIVALYEHSVFVQGAIWAIDSYDQWGVELGKALAS
                     RIIPELGHGAEPALAHDASTNALITRYRRLRG"
     gene            complement(3262..3999)
                     /locus_tag="VHX39_30480"
     CDS             complement(3262..3999)
                     /locus_tag="VHX39_30480"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX3995521.1"
                     /translation="MYEQHVTVTTKHGRMPAFAACPDGVGPFPPVIFYMDAPGTREEL
                     RNMARRIAKEGYFCLLPDMYYRLGTVHFDIPRRDDAMSAVIRASMNSITNALVTDDTA
                     AMIAWFDGNDKVRSGPVGCVGHCMSGCYITTVSARFPHRMQAAASLYGVNIVTDKPDS
                     SHLLLPQVKGELYYAFAEHDQSVPAHVIPELRASLAKTDVTNTVKVFEGTHHGFCFAE
                     RAVYNTEAAEQTWADIFDMWKRKLKQA"
     gene            4124..5299
                     /locus_tag="VHX39_30485"
     CDS             4124..5299
                     /locus_tag="VHX39_30485"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX3995522.1"
                     /translation="MRSVALIDSALAAAVADEKIAGLVAAAADEGGVIYESAFGRRNV
                     SQPQRMTTDSVFRIASMTKAITAAAAMQMVEQGKLSLDQPAREILPFLNDTKVLLGFD
                     ANDIPIMRAPRTQITLRNLLTHTAGFVYDTWNEEMARYAKITDLPACRTGKLESLSAP
                     LNFDPGERWEYGINIDVAGRMVEVASGLDLETYMQRHIFEPLSMPDTSFIQRPEWDSR
                     LPAIHARRPDGSLEPMPPAPPAGSDREFYPGGGGLFSTASDYLRFLRALMNGGHLEGN
                     RILKAETVALMGQNHMGDLDVQPLPTQNPKMSNPVNLFPGMSKKWGLSFLINTETGPA
                     GRSADSLAWAGLNNTYYWLDPAKKIAGVFMTQTLPFADHTVLDALDSFERAVYQSVG"
BASE COUNT         1040 a         1851 c         1515 g          896 t
ORIGIN      
        1 tcatcaagca tgccaatgtc gggctgaaaa cccaggtgga cgacgccgaa accaccccgc
       61 tgcgccaccc cgaacactat aagtacgaca tcgatgtcgc ccaggtcgcc gaagtctggc
      121 gccgcggcag tgtcgtcgcc tcctggctgc tcgacctggc cgccagcgcg ctgcgcaaaa
      181 gtccggatct cgaaggcttc gccggccgcg tgtccgattc cggcgaaggc cgctggaccg
      241 tgaccgccgc cgtcgatgaa agcgtaccgt caccggtgat atccgccgcg ctgttcgccc
      301 gcttcagttc ccgcggcgaa gccgattacg gcgatcgcct gctgtccgcc ctccgcttcg
      361 aattcggcgg ccacgtcgag aagccgaagg agggccattg atcccggcgc cacgtgacgc
      421 catcgtcttg tctagcagat cggcgatcca tcgaccggct tccggccggc cccattgagc
      481 gaaaaggaac cgaaccatgg catcagacgc acccaaggcc ctgaacacac ttggccaaag
      541 cctgtggctc gacaacatca cccgcgacct gctcgatagt ggcacactga agcgctacat
      601 cgacgaattg tcggtcaccg ggctgacctc caatccgacg atcttcgaca acgcgatttc
      661 ccgtagttcc tggtacgacg cggagatccg caagcagctc gaaagcggcg catccggcga
      721 gaagctgttc ttcaccctgg ccgtccagga cctcagccgc gcggcggagc ttttcctgcc
      781 ggtctatcac cgcaccggtt cggttgacgg cttcgtgtcg ctggaggtct cgcccgtctt
      841 cgcctacgac accaaggcaa cggtggagca ggccaagacc ctgcacgcgc aggcgaacaa
      901 gccgaacctg ttcatcaaga tccccggcac cccggaaggc ctgccggcga tcacagaggc
      961 tatcttcgcc ggcgtgccgg tgaacgtcac cctgctgttc tcgaccgatc agtacaaagc
     1021 cgcggccgag gcctacatgc agggcctcga aaaacgcgtc gccgccggcc tgtccgccga
     1081 tgtccgctcg gtcgcctcct tgttcctcag ccgctgggac gtcgcggtga ccgacaaagt
     1141 gccggccgac ctgcgcaaca cactggggct ggcggtcggc aggcaggcct acaaagccta
     1201 tcgcgatatc ctggagagcg accgcttcca gcgcctggag aatgtcggcg cccgcccaca
     1261 gcgcctgctg ttcgccagta ccgggaccaa ggacaagaac gcatccgaca cgctgtacat
     1321 tgagggcctc gcggcaccca acacggtgaa cacgatgccg gagggcacgc tgctggcgtt
     1381 cgccgatcat ggcaagacag cgaccgccct atcgcgcgac ggcggcgacg cggaagcgat
     1441 actcgccaaa cacatcaagg ccggcatcga cctgacggcc ctgtcgaccc agttgcaatc
     1501 cgacggcgcc aagggcttcg tcaagtcgtg gcacgaattg ctgggcgcga tcgagtccaa
     1561 gagcaaagtc ctggcctgaa cccgggggaa cgccgatgac cgccctgacc gagtcgcccg
     1621 catggcgggc gctgaccacg caccacgccc agatcaagga cgcgcatctg cgtgacctgt
     1681 tcgccaagga tcccgaccgc gccaagcgcc tctccaccga gggcgccggc ctgttcctgg
     1741 actactccaa gaaccgcgtc accgatgaga cgctgcgtct gctgctgcaa ctcgcggacg
     1801 aacgcggcgt agccaagcgg cgcgacgcca tgttcgccgg cgacaagatc aacaccaccg
     1861 aacgccgagc cgtgctgcat gtcgccctgc gtgcaccgcg cggcacggtc atcgaggtcg
     1921 atggcgccga tgtcgtgccc gacgtccaca aagtgctgga cgcgatggcc gactttgcca
     1981 cgcggctgcg ttccggtgcg tttaccggcc acaccggcaa acgcatccgc aacgtggtga
     2041 acatcggcat cggcggatcc tatctcggcc ccgagatggc ctatcgcgcc ctgcgcccgt
     2101 tcagcgaccg ctcgatgaca ttccgcttcg tcgccaacgt cgacggcgcc gacttccatg
     2161 aagcgacgct cggcctcgac gccgccgaga cgctgttcat cgtctcttcc aagaccttca
     2221 ccacgctgga aacgatgacc aacgccgcca cggcgcgcgc ctggctggtg ggcaaactgg
     2281 ggtccgacgc ggcggtggca aaacattttg ccgccgtttc caccaacatc cccggcgtga
     2341 ccaaattcgg catcgacccg gcgaacacct tcggcttctg ggattgggtc ggcggccgct
     2401 attcgatgga tagcgcgatc ggcctgtcca ccatgctggc catcggcccc gacaactatc
     2461 gcgccatgct ggccggcttc cacgcgatgg acgaacattt ccgcaccgcg ccacccgccg
     2521 ccaacctgcc gatgctgatg ggcttgctga ccgtctggta caacaacttc ttcggcgccc
     2581 agacacttgg ggtcatgccg tattccgccc atctggcgcg gcttcccgcc tatctccagc
     2641 agttgcagat ggagagcaac ggtaagcacg tcgatctaga cggccacgtc gtgaactacc
     2701 agaccggccc gatcatctgg ggcgaacccg gcaccgacgg ccagcattca ttctaccagt
     2761 tgctgcacca gggcaccaaa ttagtcccat gcgacatgat cggtttctgc aaaccgctca
     2821 gtcccctgac cgaacagcac gacctgctga tggccaacct gttcgcccag gccgaggcgc
     2881 tggccttcgg caagaccgaa caggaactga aggcggaagg gtcaccggat ttccagcggc
     2941 cgttccgtgt catgcagggc aaccgtccca ccaacatgat cctggcggaa aaactcgacc
     3001 ccgcgacgct gggtgcaatc gtggcgctct acgaacacag cgtcttcgtc cagggtgcga
     3061 tctgggcgat cgacagctac gatcaatggg gcgtcgaact cggcaaggca ctggccagcc
     3121 gcatcattcc ggaactgggc cacggggctg aacccgccct cgcccacgac gcctccacca
     3181 acgctctgat cacccgctat cgccgcctgc gcggataacc cgcgattcgc cgcccgggtc
     3241 atcgatccgg gcggcaggct gctacgcctg cttcagcttg cgcttccaca tatcgaagat
     3301 gtcggcccat gtctgttcgg ccgcttcagt gttgtagacc gcccgttcag cgaagcagaa
     3361 accatgatgt gtgccctcga acaccttcac cgtgttcgtc acatcggtct tcgcgaggct
     3421 cgcgcgcaac tcggggatca catgtgccgg aaccgattgg tcgtgttcgg cgaaggcata
     3481 atacagctca cccttcacct gcggcagcag aagatgtgac gaatccggtt tgtccgtgac
     3541 gatattgacg ccgtacagcg atgccgccgc ctgcatccgg tgcgggaacc gcgccgacac
     3601 cgtcgtgata tagcatccgc tcatgcaatg accgacacac ccgacaggac cggaccgcac
     3661 tttatcgttg ccatcgaacc aggcgatcat cgccgccgta tcatcggtta ccagggcgtt
     3721 cgtgatgctg ttcattgacg ctcggatcac cgcagacatg gcatcatccc ttcgagggat
     3781 atcgaaatgg accgtcccca atcggtagta catatccggc agcaggcaga aataaccctc
     3841 cttggcgatc cgccgagcca tgttgcgcaa ttcctcccgc gtgcccggcg catccatgta
     3901 gaaaatgacc ggcggaaacg gtccgacccc atccggacat gccgcgaacg caggcatccg
     3961 gccatgtttg gtcgtaactg tcacgtgttg ttcgtacatc ttccgcaatc ctcttatttt
     4021 accccgaatc ctctcactgt cacgctcctg ccaccaattt gcaagccgat ggcgagcggt
     4081 ggtaaagcct cacgcccata aggatgtcca ggaagagaat catatgcgca gcgttgcact
     4141 catagacagc gccctcgccg cggctgtcgc cgatgagaag atcgccggcc tcgtggcagc
     4201 ggccgccgat gagggcggag tgatctacga atccgcgttc ggccgccgaa acgtgtctca
     4261 accacagagg atgacgaccg actcggtttt ccgcatcgcg tcgatgacca aggcgatcac
     4321 cgccgccgcg gcaatgcaga tggtcgagca gggcaagctg tcgcttgacc agccggccag
     4381 ggaaatcctg cccttcctca acgacaccaa ggtcctcctc ggtttcgacg ccaacgatat
     4441 cccgatcatg cgggcacccc gcacccagat caccctgcgc aatctgctga cccataccgc
     4501 cggcttcgtc tacgacacct ggaacgagga aatggcgcgg tatgccaaga tcaccgacct
     4561 gcccgcctgc cgcaccggca aactcgaatc cctgagcgca ccgctgaact tcgaccccgg
     4621 cgagcgctgg gaatacggca tcaacatcga cgtcgccggc cggatggtgg aggtcgccag
     4681 cggcctcgac ctcgaaacct acatgcagcg tcatattttt gagccgctga gcatgcccga
     4741 caccagcttc attcagcgcc ccgaatggga cagccgcctg cccgcgatcc acgcccgccg
     4801 acccgatgga tcgctggaac cgatgccgcc ggcgcctccc gccgggtcgg atcgggaatt
     4861 ctatcccggc ggcggcggcc tgttctccac cgcgtccgac tacctgcgct ttctgcgagc
     4921 gctgatgaac ggtggccacc tggaaggcaa ccgtatcctc aaggccgaga cggtcgcgct
     4981 gatgggccag aaccatatgg gcgacctgga cgtgcagcca ttgccaacgc agaacccgaa
     5041 aatgtccaac ccggtcaacc tgttccccgg catgtccaag aaatggggcc tcagcttcct
     5101 gatcaacacg gagaccggcc ccgccggccg cagcgccgac agcctcgcat gggccggact
     5161 gaacaacacg tattactggc tggacccggc gaagaagatc gccggcgtgt tcatgaccca
     5221 gaccctgccg ttcgccgatc ataccgtgct cgacgcgctc gattcgttcg aacgcgcggt
     5281 ttaccaatcg gtcggctgac gc
//
LOCUS       DATAVD010001593         4787 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2012152, whole genome shotgun sequence.
ACCESSION   DATAVD010001593 DATAVD010000000
VERSION     DATAVD010001593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4787
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2012152"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..920)
                     /locus_tag="VHX39_30490"
     CDS             complement(<1..920)
                     /locus_tag="VHX39_30490"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HEX3995523.1"
                     /translation="MERRALFASAFAASLAPAFRVNAAETPLSAGWRHFEIVTRVTLA
                     DSPGAAKLWLPLAQTASGYQVAKEPDVRGNGRAAVVRDEQYGAAMLHATWDGSATGQQ
                     VQVVQTVATRDRGAIPLAPLTKAERDFWTAPLPTVPTDGIVRATADKITAGHSTPRDR
                     LRAIYDWVVETTWRDPDTAGCGTGDFKQMLATNHFGGKCADINGLMVGLARAAGFPAR
                     DVYGIRVADSRQFPSIGKSGDISKAQHCRAEVFLDDSGWFPVDPADVRKVVLEGKLSI
                     DSPEVKALRERLFGYWEMNWVGYNSATDID"
     gene            1026..1403
                     /locus_tag="VHX39_30495"
     CDS             1026..1403
                     /locus_tag="VHX39_30495"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HEX3995524.1"
                     /translation="MFGFIFDFDGVIADSEALANTVLAEAVNRLGLPTTLDDALTRYM
                     GKRWQDMVAAIQDGIGRPVPDNFSDDLKMAILARFSTDLREFDGASAFIRRGPRRRDM
                     GRDRRHRCRPQPGLRRQPAPMMR"
     gene            1434..2507
                     /locus_tag="VHX39_30500"
     CDS             1434..2507
                     /locus_tag="VHX39_30500"
                     /EC_number="5.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF008277.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016857 - racemase and epimerase activity,
                     acting on carbohydrates and derivatives [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldose epimerase family protein"
                     /protein_id="HEX3995525.1"
                     /translation="MMTVLPSEPFGQLPDGRPATLFTLENSHLRVRITDFGGRMVSIE
                     APDRNGIRDHVLLGFDDVAAYSDHGGSFGCLLGRYANRIAGAAFTLDGQTFPLSKNSG
                     DLTLHGGAVGFNRLFWTVASAKTDPVPTLILNLVSPDGDQGFPGEVTAQATYRLDADS
                     LSLALEARTTRPTVINLSAHPYFNLGGPACGDVLGHEATIAADAFLPTDAEQLPSGEI
                     RPVAGTPFDFRTPTLLGARIRQPDPQLYHGLGYDHCFVLRTHDPAMRVHDPATGRVLE
                     IHTDQPGLQVYTGNKLTGTFAGHGGVVYRQSAGLALEPQDFPDAPHHPNFPSTTLRPG
                     EVYHRTIRYRFGITSTGNPASAP"
     gene            complement(2479..>4787)
                     /locus_tag="VHX39_30505"
     CDS             complement(2479..>4787)
                     /locus_tag="VHX39_30505"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011930747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="error-prone DNA polymerase"
                     /protein_id="HEX3995526.1"
                     /translation="ELDLIGSLDYAPYFLTVESIVRFARSRDILCQGRGSAANSAVCF
                     VLGITELDPARSSLLFERFISAERHEPPDIDVDFEHERREEVIQWIYETYGRHRAALC
                     ATIIRYRGRGAMRDVGKALGLAEDVISALATQIWSWSEEGVAEEQAAALSLNMEDRRL
                     RLALGLARILIGFPRHMSQHPGGFVLTEDRLDELVVIEPARMADRQVIEWDKDDIEHL
                     RFMKVDVLGLGMLGCMRRAFDLLTEQSGRRLDMATVPPEDPATYAMIQKADTLGTFQI
                     ESRAQMSMLPRLKPRKFYDLVIQIAIVRPGPIQGDMVHPYLRRRDGLEKPVYPTQALR
                     GVLEKTLGVPLFQEQAMQVAMVCAGFTATEADALRRSMATFKMTGGVKHFKDKLIAGM
                     IDRGYTVEFANKLFSQIEGFGSYGFPESHAASFALIAYASSWMKCHHPDVFCCALLNA
                     QPMGFYAPAQIVRDARAHGVEVRPVSVNESVWDCTLEGAAVRLGLRMAKGLTTTHADE
                     MIVRRGAGYRSIEDMWRRLHVPVSALERLAEADAFQTLGLDRRQALWTIRGLSDTRLP
                     LFDIVPAEPDPEPAVALAAMTAGRQVVEDYRSVGLSLRRHPVSFLRHDLTERRIVRCA
                     DLIGVSDGTRLEVGGIILVRQRPGSAGGVLFVTVEDETGHANLILWPSVFEAQRSLIL
                     SASMIACRGKLQRAGEVTHVIAEQLTDLSDLLRDVGQRDEPFSFPRGRGDDSYLDCAP
                     DSRGTKIVHGRDIHVREKGIKVPTRDFR"
BASE COUNT          938 a         1683 c         1322 g          844 t
ORIGIN      
        1 aagtcgatgt cggtggcgct gttgtaacca acccaattca tctcccaata cccgaacaga
       61 cgttcgcgca gggctttcac ctccggactg tcgatgctca gcttgccttc cagcaccacc
      121 ttgcggacat ccgcgggatc aaccgggaac cagcccgaat catccaggaa cacctcggcc
      181 cggcagtgct gcgccttgga gatgtcgccg cttttgccga tcgacgggaa ctgtcgggaa
      241 tcagccaccc gaatgccgta gacatcccgc gccggaaagc cggccgcccg agcaagtccg
      301 accatcaggc cattgatatc ggcacatttg ccaccgaaat gattggttgc cagcatctgc
      361 ttgaagtcgc cggtgccgca acccgcggta tccgggtcgc gccacgtggt ctccacaacc
      421 cagtcataga tggcccgcag cctgtcgcgc ggtgtcgagt ggcccgcggt gatcttgtcc
      481 gccgtcgccc gcacgatgcc atcggtcggg accgtcggca gcggcgccgt ccagaaatcc
      541 cgttccgcct tggtcagcgg agccaacgga atggcacccc ggtcgcgcgt ggcgacggtc
      601 tgcacgactt gaacctgctg ccccgtcgcc gagccgtccc atgtcgcgtg caacattgcc
      661 gcgccgtact gctcgtcgcg caccaccgct gcccggccgt tgccacgcac atccggttct
      721 ttcgcgacct ggtaaccgct cgccgtctgt gccagcggca accaaagctt ggcagcgcca
      781 ggggagtcgg ccaacgtgac gcgcgtgacg atttcgaaat gccgccatcc cgccgataac
      841 ggcgtttcgg cggcgttgac gcggaaagcc ggcgccaggg aagcagcgaa ggccgaggca
      901 aacagggcgc gacgttccac caagatgatc cttccaggaa aacatggcat ttcgaccgcg
      961 aatccggttc ctttgcaagc cgaccaagga tcgcggataa catccaccca cctcggcgaa
     1021 cggcaatgtt cggattcatc ttcgatttcg acggcgtgat cgccgacagt gaggcgctgg
     1081 caaacaccgt cctcgcagag gccgtcaacc gtctgggcct gccgaccaca ctggatgatg
     1141 ctttgacccg ttacatgggc aaacgctggc aggacatggt tgccgccatc caggacggga
     1201 tcggccgccc ggtgccggat aatttctccg acgatctgaa gatggcgata ttggcacgct
     1261 ttagcaccga cttgcgagag ttcgacggcg catcggcctt catccggcgc ggcccacgtc
     1321 gccgcgacat gggacgcgat cgccgccatc gttgccgtcc acaaccgggt ttgaggcgac
     1381 agccggcgcc catgatgcga tagacgacga cacagtcacg aacaggagca acgatgatga
     1441 cagtcctgcc ctccgaaccc ttcggccagt tgccggacgg ccgtcccgcg acgcttttca
     1501 cgctggagaa cagccacctg cgcgtacgca tcactgattt cggcggccgc atggtcagca
     1561 tcgaggcgcc cgaccgaaac ggaatccgcg atcacgtcct gctgggattt gacgacgttg
     1621 ccgcctacag cgaccacggc ggttccttcg gctgtctgct cgggcgctat gccaaccgga
     1681 tcgccggcgc cgccttcacc ctggatggcc aaaccttccc actctcgaaa aacagcggcg
     1741 acctgacgct gcacggcgga gcggtcgggt tcaaccggct gttctggacc gtggcgtccg
     1801 ccaagaccga cccggtgcca accttgatcc tgaaccttgt cagccccgat ggcgatcaag
     1861 gttttccggg tgaggtcacc gcccaggcaa cctatcggct cgacgccgat tcactgtcgc
     1921 tggccttgga agcgcggacg accagaccaa ccgtcatcaa cctcagcgca catccctatt
     1981 tcaacctcgg cggccccgca tgtggcgacg tgctcggcca cgaggcaacc atcgcggccg
     2041 acgccttcct ccccaccgac gccgagcagc ttccctccgg agaaatccgt ccggtcgccg
     2101 gcacgccgtt cgacttccga acccctacgc tgctgggcgc tcgtatcaga cagcccgatc
     2161 cgcaacttta tcatggcctg ggctacgatc actgcttcgt tctgcgaacc catgatccgg
     2221 cgatgcgggt ccacgatccg gcgaccgggc gggtcctgga aattcatacc gatcaaccag
     2281 gcctccaggt ttacacaggg aataaattaa ccggcacatt cgccggacat ggcggcgtgg
     2341 tgtatcgcca gtccgccggc ctggcgctgg aaccgcagga ttttcccgat gcgccgcatc
     2401 acccgaattt tccgtcaacc acgctgcggc ccggagaagt ctaccatcga acgatccgct
     2461 accggttcgg tatcacatct accggaaatc ccgcgtcggc accttgatcc ccttttcccg
     2521 cacatggata tcgcggccgt ggacgatttt cgtcccgcgt gaatccggtg cgcaatcgag
     2581 ataggaatcg tcccctcgtc cacgcgggaa ggaaaacggc tcgtcccgtt gccccacgtc
     2641 acgcagcagg tcggatagat cggtcagttg ttcggcaatc acatgcgtca cctcccccgc
     2701 ccgctgcaac ttgccgcggc aggcgatcat gctggccgac aggatcaggg accgctgcgc
     2761 ctcaaacact gacggccaca ggatcaggtt ggcatgccca gtttcgtcct caaccgtaac
     2821 aaaaagcaca ccgccggcac tgcccggccg ttgccgaacc aggatgatgc cgcccacctc
     2881 cagccgcgtg ccatcgctga ccccaatcag gtccgcacag cggacgatgc gacgctctgt
     2941 caggtcatgc cgcaggaaac tgaccggatg gcgacgcaaa ctcagcccga cgctgcgata
     3001 atcctccacc acctgccgcc cggcggtcat cgccgccaac gccaccgccg gttcgggatc
     3061 gggttccgcc ggcacaatat cgaacaacgg caaccgcgtg tcagacaggc ctcgaatggt
     3121 ccacaacgcc tgccgccgat ccaaaccgag ggtctggaat gcatccgcct ccgccagccg
     3181 ttccagcgcc gagaccggaa cgtgcagccg gcgccacata tcctcgatcg agcgatatcc
     3241 cgccccccgc ctcacgatca tttcgtccgc atgcgtcgtg gtgagccctt tcgccatgcg
     3301 caggccaagc cggacggccg ccccctccag cgtgcaatcc cacaccgact cgttcaccga
     3361 aaccggccgc acctccaccc cgtgcgcacg agcatcgcgg acgatctggg caggggcata
     3421 gaaccccatg ggctgcgcat tcagcagcgc gcaacagaac acgtccgggt ggtggcactt
     3481 catccatgac gacgcatagg cgatcagcgc gaaactcgcc gcatgacttt ccggaaaacc
     3541 gtaactaccg aaaccttcga tctgggagaa cagcttgttg gcgaattcga cggtgtagcc
     3601 tctgtcgatc atgccagcga tcagcttgtc cttgaaatgc ttgacgccgc cggtcatctt
     3661 gaatgttgcc atgctgcgtc gaagtgcatc agcctcggtc gccgtgaagc cggcacaaac
     3721 catcgccact tgcatcgcct gttcctggaa cagcggcacg ccaagggtct tttccagcac
     3781 accccgaagc gcctgcgtag gatagaccgg tttctccagc ccatcccgcc ggcgcagata
     3841 cggatgcacc atgtcgccct ggatcggccc cggtcgcacg atcgcgatct gaatgaccag
     3901 atcatagaat ttccgtggtt tcagccgagg cagcatcgac atctgcgccc gcgattcgat
     3961 ctggaacgta cccagcgtat ccgccttctg gatcatcgcg tatgtggcgg gatcttctgg
     4021 aggtaccgtc gccatatcca gccgccggcc gctctgttcc gtcagaagat cgaatgcccg
     4081 tcgcatgcag ccaagcatgc ccagccccag cacatcgacc ttcatgaaac gtagatgctc
     4141 gatgtcatcc ttgtcccatt cgatcacctg ccgatcggcc atacgggcgg gctcgatcac
     4201 caccagttcg tccagccggt cctcggtcaa aacgaagccg ccgggatgct gcgacatgtg
     4261 ccggggaaag ccgatcaaga tgcgggccag ccctaaagcc agccgcagcc gccggtcttc
     4321 catattaagg ctcagcgccg cggcctgttc ctcggccaca ccttcctcac tccagctcca
     4381 tatctgggtc gccagcgcac tgatcacatc ctcggccagg cccagcgcct tcccgacgtc
     4441 acgcatcgcc ccacgcccgc gatagcggat gatcgtcgcg cacaacgccg cccgatggcg
     4501 gccataggtt tcgtagatcc attggatcac ctcttcccgc cgctcatgct cgaaatcgac
     4561 atcgatatcc ggcggttcat gccgttcggc actgatgaaa cgttcgaaca gcagactgct
     4621 ccgcgccgga tcaagttccg tgatcccaag cacgaagcac accgccgaat tggccgccga
     4681 cccacgcccc tgacacagaa tgtccctgga gcgcgcgaac cgcacaatgc tttccacagt
     4741 caggaaatac ggtgcataat ccaggctgcc tatcagatcg agttcat
//
LOCUS       DATAVD010001594         2079 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3311887, whole genome shotgun sequence.
ACCESSION   DATAVD010001594 DATAVD010000000
VERSION     DATAVD010001594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3311887"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            235..687
                     /locus_tag="VHX39_30510"
     CDS             235..687
                     /locus_tag="VHX39_30510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX3995527.1"
                     /translation="MFDARNDARNEGGTYQRVEVITGRQRRRRWTAEEKARIVAESLE
                     ADANISDVARRHGVARGLLTIWRRQFSSGGQQPGQSFAAVKIDTVAAVSNDTPQYSAA
                     PDALATALPVVRGRGRIEIDIGGARIRVESGVDHATLAMVLATVRGGK"
     gene            714..1037
                     /gene="tnpB"
                     /locus_tag="VHX39_30515"
                     /pseudo
     CDS             714..1037
                     /gene="tnpB"
                     /locus_tag="VHX39_30515"
                     /inference="COORDINATES: protein motif:HMM:NF017528.4"
                     /note="TnpB, as the term is used for proteins encoded by
                     IS66 family insertion elements, is considered an accessory
                     protein, since TnpC, encoded by a neighboring gene, is a
                     DDE family transposase.; internal stop; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
     gene            1051..>2079
                     /locus_tag="VHX39_30520"
     CDS             1051..>2079
                     /locus_tag="VHX39_30520"
                     /inference="COORDINATES: protein motif:HMM:NF033517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HEX3995528.1"
                     /translation="MLANLTNLKYALLMALRPEDLPSDPARLIEMVLSLDAENDRLRA
                     VIGTFKDMVFGSRSEKLCAVVADQLALDLADLATDVTLPAAANDDHVPSKAAGATSKP
                     RKKAQRNIGALPKHLPRCEQVIEPETTACPCCQGRLHKIGQDVSEVLDVIPAILRVLR
                     MIRPKYACRGCEGAVVQAKALPRLIENSMASTALVTHVVVSKFAWYSTLYRQVQILAG
                     HGVHLDRSTLAGWVKRTAWWLTGLYELQLRTIHAAPLFFCDETPMPVLDPGRGRTKVC
                     QFWAHAVDDRPWGGPSPPAVAYVFADGRGKAEIAAQLIDYAGILQVDGYAAYKSLAKG
                     AREAGTIRL"
BASE COUNT          389 a          590 c          701 g          399 t
ORIGIN      
        1 ggacagacga tgatcgcggc ctgaacgccg ttcccgtcga caatcgaatc gactgatcgg
       61 tgccccctgc aaccaacagc gggggttacc gatgccagcg gagagattgt cgatgcgcaa
      121 ggtgcgcgag gtgcttcgta accggcatca gcgcccccac ctcgcgcgcg cccggatttc
      181 ccgcgatatt agcgtcattc gctgatttcg ggagatggct tgatggtaac ttccatgttt
      241 gatgccagga atgatgccag gaatgaaggt ggtacttatc aacgggtcga ggtgattacg
      301 gggcggcagc gccggcgccg atggacggcg gaagagaagg cgcggatcgt tgcggagagc
      361 cttgaggcag acgcaaacat atcggatgtg gcgcgccgtc acggtgtggc tcgcgggttg
      421 ctgacgatat ggcgacgcca gttctcgagc gggggccagc agccaggaca aagctttgcc
      481 gcggtgaaga tcgatacggt tgcggcagtg tcgaacgata ccccgcaata ttctgcggcg
      541 ccggatgcac tggcaacggc attgccagtc gtgaggggcc gaggtcggat tgagatcgac
      601 attggcgggg cccggatcag ggttgagagt ggcgttgatc acgccacact ggcgatggtg
      661 ctggcaacgg tacggggcgg caagtgatct cgttccgcgc agacctgaag atcatgttgg
      721 ccgcgcagcc tgtcgacttc cgcaaaagcg ttcatacctt gtcggcactg gtgagcgaag
      781 cactgcgggc caatccgtat tgcggcgacg tctttatctt ccgctcgaaa cgagctgacc
      841 gcgtgaagct tttggcgtgg gacggcagcg gcatggtttt ggtgacgaag tagctcgagg
      901 aaggtcgctt cacctggccg ccgatccgtg atggcatcgt atctttgacg gcgacacaat
      961 tatcgatgct gatcgatggc ctggactgga cgcgcgtgac gccaaaggcc gtgaagcgac
     1021 cggttgcaat gatgtgagaa gtggccattg ttgctggcga atctgacgaa tctcaagtat
     1081 gcattgttga tggcgcttcg ccccgaagat cttccttcag atcctgctcg tctcatcgag
     1141 atggtgctgt cgcttgacgc tgagaacgat cggctgcggg ccgtcattgg taccttcaag
     1201 gacatggtgt tcggttcgcg atcggagaag ctctgcgcgg tcgtcgccga tcagctcgcc
     1261 ctcgatcttg cggatctcgc cacagacgtg actctaccgg ccgctgccaa cgacgaccat
     1321 gtgccgagca aagcagctgg cgccaccagc aagccccgca agaaggccca gcgcaacatc
     1381 ggcgcgctgc ccaagcatct gccgcgctgc gagcaggtga tcgagcccga gacgaccgcg
     1441 tgcccgtgct gccaaggccg cctgcacaag atcggccagg acgtcagcga ggtgctggac
     1501 gtcattccgg cgatcctgcg ggtgctgcgc atgatccgtc ccaaatatgc ctgccggggt
     1561 tgcgagggag cagtcgtcca ggcgaaggcc ttgccacggc tgatcgagaa cagcatggcg
     1621 tcgaccgcgc tggtgaccca tgtggtggtc tcgaagttcg cctggtactc gacgctgtac
     1681 cggcaggtgc agatcctggc cggtcatggc gtgcatctgg accgctcgac cctggccggc
     1741 tgggtgaagc ggacagcgtg gtggctgacg gggctctatg aactccagtt gcgaaccatc
     1801 cacgcggcgc cattgttctt ttgcgacgag acgccgatgc cggtgctcga tcccggaagg
     1861 gggcgcacta aggtctgtca attctgggcc catgcagtgg atgaccgacc ctggggaggg
     1921 ccatcgccgc ccgctgtggc ttacgtgttc gcggacggcc ggggcaaggc tgaaatcgca
     1981 gcgcaattga tcgactatgc gggcatcctg caggtcgatg gctatgcggc ctacaagtcg
     2041 ctggccaagg gcgcgcgcga ggctggaacg atccggctt
//
LOCUS       DATAVD010001595         1703 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_523593, whole genome shotgun sequence.
ACCESSION   DATAVD010001595 DATAVD010000000
VERSION     DATAVD010001595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_523593"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..206)
                     /locus_tag="VHX39_30525"
     CDS             complement(<1..206)
                     /locus_tag="VHX39_30525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3995529.1"
                     /translation="MQLSGIRVLDLTRVLSGPFCTALLGDLGADVLKVEAPEGDSVRR
                     QGAIRDGLSWYFAQYNRNKRSLRL"
     gene            complement(222..1400)
                     /locus_tag="VHX39_30530"
     CDS             complement(222..1400)
                     /locus_tag="VHX39_30530"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3995530.1"
                     /translation="MSDETLVAIGEDYSELRESVRKICARYPGSYWSGLEDQQAYPTA
                     FINELTEAGFLGALIPEEYGGSGLPLRAAAVILEEINAAGCVASQGHAQMYIMGTLLR
                     HGSEAQKRQYLPGIAAGKIRLQAFGVTEPSTGSDTTQLKTRAVRDGDHYVINGQKVWT
                     SRAMHSDMMLLLARTTSADQVKKRSDGLSVFLVDMSEMNQGKGLEVRPIKAMINHNTT
                     EIFFDNFRIPASSLIGEEGKGFRYILDGMNAERILVASEAVGDGRWFVRKATQYAKDR
                     VVFGSPIGKNQAVQFPIARSWAELEAADMICRRAAALFDDGKECGADANIAKLLASEA
                     AWKAADTCMQTFGGFAYAREYEIERKWREVRLYQIAPISTNLILGFVGQHVLGMPRSY
                     "
     gene            1501..>1703
                     /locus_tag="VHX39_30535"
     CDS             1501..>1703
                     /locus_tag="VHX39_30535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003629605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEX3995531.1"
                     /translation="MRILFVTANRLGDAVLSTGLLDHLIRTWPTARFTVACGPVAEGV
                     FQRMPGLERIIVIEKQSFGRHWLG"
BASE COUNT          319 a          533 c          505 g          346 t
ORIGIN      
        1 tccagacgca gcgagcgttt gttgcggttg tactgggcga aataccacga cagcccgtcg
       61 cggatggcac cttggcgacg gaccgagtca ccctccggcg cttcgacctt cagcacatcc
      121 gcgccgagat cgccgagcaa cgcggtgcag aacgggccag acaaaacgcg cgtgagatcc
      181 agaacccgga taccggatag ttgcatgata accgcctgtc ttcagtatga ccgcggcatg
      241 cccaacacgt gctggccaac aaaccccagg atgaggttgg tcgaaatggg agcgatctga
      301 tacaatcgga cctcccgcca tttgcgctcg atttcgtatt cccgcgcata ggcaaatccg
      361 ccgaacgttt gcatgcaggt atcggcggct ttccaggccg cctcgcttgc cagtaatttg
      421 gcaatattgg cgtcggcacc acactctttg ccatcgtcaa acagtgcagc cgcgcggcgg
      481 caaatcatat cggccgcttc cagttcggcc caggaacggg cgatgggaaa ttgcacggcc
      541 tgatttttgc cgatggggga gccgaatacg acgcggtcct tggcatattg tgtggctttc
      601 cgcacaaacc atctgccatc gccaaccgcc tcgctggcga ccagaatgcg ctcggcgttc
      661 atgccgtcga ggatgtagcg gaagcctttg ccctcctcgc caatcaggct ggaagctgga
      721 atgcggaaat tgtcgaagaa gatttccgtg gtgttgtggt tgatcatcgc tttgatcggg
      781 cggacctcca ggcccttgcc ctggttcatt tcgctcatgt cgaccaggaa caccgacagc
      841 ccgtcgctac gctttttcac ctggtccgcc gacgtcgtgc gagccagcag caacatcatg
      901 tcggaatgca tggcacggct ggtccagacc ttctggccat tgatcacgta atgatcgcca
      961 tcacgcacgg cgcgggtctt caattgcgtg gtgtcggaac cagtactcgg ttcggtgacg
     1021 ccgaacgcct gcagccggat cttgccggcg gcgatgcccg gcaagtactg ccgcttctgc
     1081 gcctcgctgc cgtgccgcag cagcgtgccc atgatgtaca tctgcgcgtg gccctgactg
     1141 gcgacgcagc ctgcagcgtt gatctcctcc aggatcaccg ccgccgcgcg caacggcaaa
     1201 ccggagccgc catattcctc tgggatcagc gcgccgagaa agcccgcctc ggtcagttcg
     1261 ttgatgaatg cggtcggata ggcttgctga tcctcgagcc cgctccaata actgcccgga
     1321 tagcgcgcgc aaatcttgcg gaccgactca cgcaattcgg aataatcttc accgatggca
     1381 accagggttt cgtccgacat gatggggtcc tccgacgggc cacgctgccg aacggcggac
     1441 ggtccgtcaa accggcggcg cctcgcgtgg agaccgttcc gctggtaagc ccatcctcgc
     1501 atgcgaatcc tgtttgttac cgccaaccgg ttgggcgatg cggtgctgtc caccgggctg
     1561 ctggatcatt taattcggac atggccgacg gcccgcttca ccgtagcgtg cggtccggtg
     1621 gcggagggcg tgtttcagcg catgcccggc ctggagcgca tcattgttat cgaaaagcaa
     1681 tcttttggcc ggcattggct ggg
//
LOCUS       DATAVD010001596         3158 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1825384, whole genome shotgun sequence.
ACCESSION   DATAVD010001596 DATAVD010000000
VERSION     DATAVD010001596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3158
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1825384"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            260..1303
                     /locus_tag="VHX39_30540"
     CDS             260..1303
                     /locus_tag="VHX39_30540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006558701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEX3995532.1"
                     /translation="MFSRLFGFMSADMAIDLGTANTLVYVKGRGVVLNEPSVVAIAES
                     RGKKQVVAVGDEAKQMLGRTPGFITASRPLRDGVIADFEVAEEMIKHFIRKVNGRRGW
                     ASPLIIVCVPSGSTPVERRAIQESAESAGARKVQLIEEPMAAAIGAGLPVTEPSGSMI
                     VDIGGGTTEVAVISLGGIVYSRSIRVGGDKMDEAIISYIRRAHNLLIGESSAERIKMD
                     VGAAHLPADNEDGPYREVRGRDLINGVPREVVVSQAQIAESLAEPVTAIIEAVKVALE
                     NTPPELAADIVDRGIVMTGGGALLHGLDQVLRAATGLSVVVAENPLQCVALGTGRALE
                     ERKRLGNVLTSMY"
     gene            1373..2233
                     /gene="mreC"
                     /locus_tag="VHX39_30545"
     CDS             1373..2233
                     /gene="mreC"
                     /locus_tag="VHX39_30545"
                     /inference="COORDINATES: protein motif:HMM:NF010512.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEX3995533.1"
                     /translation="MIRPSVQTRHALARLTLPAMVVASFGLMLVGKVDTILVERARIA
                     VYDASAPIYAALAQPIGHMREAIAETGGLWELREENARLRDENERLRRWQAVALTLDA
                     EDQQLKAAMHWIPDPEASYVTARAVADAGGVYAKAVLLSVGPNHPLHKGQIALDERGL
                     VGRITEVGSRTARVLLITDMNSRVPVILQGSRSRAILAGTNGPLPRLLYWSEGTVPKE
                     GERVVTSAEANAFPANLPVGTVRYNANGVPEVEPDANLNALDIVRVFDYGLTGFAAPE
                     VTARSAQGRH"
     gene            2341..2787
                     /locus_tag="VHX39_30550"
     CDS             2341..2787
                     /locus_tag="VHX39_30550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HEX3995534.1"
                     /translation="MFLSLAPFGLWGHAALLPTVALTCVWFWSLFQPAAMSPPVVFLI
                     GVLLDLLGFLPPGVGPLTMLATYGMAQWLRRFLLHQGFATIWLIFVGVACGIGALNWA
                     LVSVLTFSLVSPGPVLFQAGLAAAMYPAVAIPLTAAHRSIADPDKA"
     gene            2784..>3158
                     /locus_tag="VHX39_30555"
     CDS             2784..>3158
                     /locus_tag="VHX39_30555"
                     /inference="COORDINATES: protein motif:HMM:NF015662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEX3995535.1"
                     /translation="MIRRGKSRNTVFTRRALLIGGAQTLMLSGLALRLRQVQVEQGKR
                     YATMAQDNSVAARLIAPQRGRILDRFGTQLAGNLINWRALLIAEQTTDVRKSLDNFAA
                     IVPLTDTERARIDRDLHHGKSFV"
BASE COUNT          580 a          936 c          984 g          658 t
ORIGIN      
        1 atccgcgcca tggcagtcga ccggattgag ccacggctcg cggcagactg atcatctgcc
       61 gcctaagaca gggacaccct ggctgcccga ccgtcataga tcgccgcctc aggcaacacc
      121 gcagactcgc ggggtatgcg cgccttccgg ggacagtccg tagtggcggg ccggcgtcac
      181 cctcttgtgg accgtgctcc cccggtctaa gccccggcgt tcgcccgcca gacgtccgtc
      241 atcgtcaaag gctccagcaa tgttctctcg gctgttcggc ttcatgtctg ctgacatggc
      301 cattgatctc ggcaccgcca atacgctcgt ctacgtgaag ggtcggggcg tggttctgaa
      361 cgagcccagt gtggtggcga tcgccgagtc gcgaggcaaa aagcaagtgg tcgcagtggg
      421 cgacgaagcc aagcagatgc tgggccgcac tccgggcttc atcaccgcca gtcgcccgct
      481 gcgcgatggc gtcatcgccg actttgaagt cgccgaggaa atgatcaagc atttcatccg
      541 caaagtgaac ggccgtcgtg gctgggcgtc gcccctgatc attgtctgcg taccctcggg
      601 ttccacgccc gtcgagcggc gagcgatcca ggagagcgct gaaagcgccg gcgcgcgcaa
      661 agtccaattg atcgaagagc cgatggccgc cgcaatcggc gccggtttgc cggtgaccga
      721 accgtcgggc tccatgatcg tcgacatcgg tggcggcacg accgaagtcg ccgtgatctc
      781 gttaggcggc atcgtatatt cgcgcagcat tcgggtcggc ggcgacaaga tggatgaggc
      841 aatcatctct tacatccggc gcgcccataa cctgctgatc ggcgaatcgt ccgccgagcg
      901 aattaagatg gatgttggcg ccgctcacct tcccgccgac aatgaggacg gcccctaccg
      961 cgaagtgaga ggccgtgacc tcatcaacgg cgtgccgcgc gaagtcgttg tcagtcaggc
     1021 gcaaatcgcg gaaagcctcg cggagccggt gaccgcgatc atcgaggcgg ttaaggttgc
     1081 tctggaaaac acaccccctg agcttgcggc cgacatcgtc gatcgaggta tcgtcatgac
     1141 cggtggcggt gcattgttac acggtctcga tcaggtgctg agggctgcaa ccggtctttc
     1201 ggtggtggtg gcggagaatc cgttgcaatg tgtagcactc ggtaccggga gagcacttga
     1261 agagcgcaag cgactcggca atgtgctgac cagtatgtat tgatctccgc gcgttcctcg
     1321 ccaggttgga gtcatcatgg caccgacgtt tgacgttgct taatttcgga caatgatccg
     1381 gccctcggtt caaacacgcc acgcgttggc ccggctgact ttgccggcga tggtggtcgc
     1441 atcattcggt ttgatgttgg tcggcaaggt cgacacgatc ctcgtggaac gtgcccgcat
     1501 cgctgtttat gatgccagtg ccccgatcta tgcggcgctg gcgcaaccga ttggccatat
     1561 gcgggaggca atcgctgaaa ccggagggct gtgggaactt cgcgaggaaa atgcgcgttt
     1621 gcgagacgaa aacgaacgac tgcggcggtg gcaagcggtc gctctgacac tcgatgcgga
     1681 ggaccagcag ttaaaggctg caatgcactg gatcccggat ccggaagcct cctatgtaac
     1741 cgccagggcg gtggctgatg ccggcggggt ttatgcgaaa gctgtcttgc tttcggtggg
     1801 acctaatcac ccgctgcaca agggtcagat cgcactcgat gaacgtggcc tggtgggccg
     1861 gatcaccgaa gttggcagcc gtacggcgcg cgttcttctg atcacggata tgaacagccg
     1921 cgtgccggtc attctgcaag gcagtcgttc ccgtgcgatt ctcgccggca caaacggccc
     1981 attgccacgc ttgctctatt ggtcggaggg tactgtcccc aaggaaggag aaagggttgt
     2041 taccagtgcc gaagccaatg cattcccggc caaccttccg gtcggaaccg tcagatacaa
     2101 tgccaatggc gttcccgagg tcgaacctga cgcgaatttg aatgcactcg atatcgtccg
     2161 cgtcttcgat tacggcctga ccggctttgc cgcgccggag gtgaccgctc gctccgcaca
     2221 aggccgccac taatggcata cggcgaccga tttcccggag tccggccgcg catcaccatg
     2281 ggccgtagac tggatatcgt atggcggcac gcatttccgg caacgacgag ttgccttctg
     2341 atgttccttt cgctcgcgcc ttttggattg tggggccacg cggcgctgtt gcctacggtg
     2401 gcgctgacct gcgtgtggtt ctggtcattg tttcagcctg ccgccatgtc gcctccggtc
     2461 gtgttcctga tcggtgtgct gctggacctg cttggctttc tgccgccagg tgtcggccca
     2521 ctgacaatgt tggcgacata cggaatggcg cagtggttga ggcgatttct cctgcaccag
     2581 ggcttcgcca cgatctggtt gatttttgtc ggcgttgcat gtggaattgg tgcgttaaac
     2641 tgggctttgg tctccgtgct cacatttagt ctcgtgtccc cgggtccggt gctgttccag
     2701 gctggtcttg cggccgcaat gtatcccgct gtggcgattc cattgacagc cgcgcatcgc
     2761 tccatcgctg atccggataa ggcatgattc gtcgaggcaa aagccgcaac acggtcttca
     2821 cccgccgcgc attgttgatt ggtggggcgc agacattgat gctgtccggg ctggcgctgc
     2881 gcctacgcca ggtgcaggtc gaacagggca aacgctatgc cacgatggca caggacaaca
     2941 gcgttgctgc gcgactgatc gcgccgcaaa ggggtcgcat actcgaccgg ttcggcaccc
     3001 agttggcagg gaatttgata aactggcgcg ccttgctgat tgctgaacaa acgacggacg
     3061 tccgcaaaag ccttgacaat tttgccgcca tcgtcccgct gaccgatacc gaacgggcac
     3121 gaatcgaccg tgacctccat catggcaaaa gctttgtt
//
LOCUS       DATAVD010001597         1508 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2012648, whole genome shotgun sequence.
ACCESSION   DATAVD010001597 DATAVD010000000
VERSION     DATAVD010001597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1508
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2012648"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1508
                     /locus_tag="VHX39_30560"
     CDS             <1..>1508
                     /locus_tag="VHX39_30560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995536.1"
                     /translation="PVTSSALPATGTDGFVTELSDATASCSVTLNPANVTVSQYSQVL
                     TFSAVAPSGCTWIASTNASWAVITYGSPGTGTGSFTVQITANADTSSTERSAVLTVGD
                     QTVTITQAGGGCSYALNQSSYMVPSSASSLTAVLTVPAGCPWTVTNNYPAAITIASGA
                     WGTGSGTINLTLAPNLTTMSETFDLPVGTTSVQVVQAGATAPPALQLITLAPCRVIDT
                     RNSNGPLGGPFIAGGATRTIPIPASSCGVPANAAAYALNVTAVPRTGTLGYLTFWPTG
                     QTQPLVSTLNSLDGSVLANAAIVPAGESGSINAFATDDTDLIVDINGYFVPPVADALQ
                     FYPVPPCRVLDTRNPDGDFGGPFLAAVVARSFAIGSSSCGTISNAAAYSLNVTVVPHG
                     TLGYLTAWPTGQPQPLVSTLNSLDGTILANAAIVPAGTGGEVSFFGANDTDLVVDING
                     YFAPPAAGGLNFYATTPCRLVDTRNPDGTYGGPVIAGQSTRSFPLADAACGL"
BASE COUNT          265 a          525 c          408 g          310 t
ORIGIN      
        1 tcccgtcacc tcgtccgcat tgcccgctac cggcaccgat gggttcgtga cggagctttc
       61 agatgctacc gcctcatgct cggtaacgct gaatccggca aacgtcacgg tatctcaata
      121 cagccaggtg ctcaccttta gcgccgtcgc gccgagcggt tgcacatgga tcgcgtcgac
      181 caacgcgtcg tgggccgtga ttacgtatgg ttccccggga accggaaccg gcagttttac
      241 cgtgcaaatc accgccaatg cggatacgag cagcaccgaa cgatcggcag ttctgacggt
      301 cggcgatcag accgtcacca taacccaagc cgggggcggt tgcagttacg cgctcaatca
      361 gagtagctat atggtgccct cttccgctag ctctctcacg gccgttctga ctgttccggc
      421 cggttgcccg tggaccgtca caaacaacta ccccgctgcg atcacgattg cctccggagc
      481 ctgggggact ggcagcggca cgatcaatct gacgctcgcg cctaacttga ctacaatgtc
      541 ggagactttc gatcttcctg tcgggacgac aagcgttcag gtcgttcagg ccggtgcaac
      601 cgctccgccg gcgcttcagt tgatcacgct cgcgccgtgc cgcgtcatcg acaccagaaa
      661 ctcgaacggc cctctcggcg gtcccttcat cgcgggcggc gcaacccgca cgattcccat
      721 cccagccagc tcctgcgggg ttccagccaa tgccgccgcg tacgcgctca acgtgaccgc
      781 cgttccacgg acgggaaccc tcggctattt aaccttctgg ccgaccggcc agacgcaacc
      841 ccttgtatca actctcaact ctctcgacgg atcggttctg gccaatgccg ctatcgttcc
      901 agcgggcgaa tccggctcta tcaatgcttt tgcgacggat gacaccgatc tgatcgtcga
      961 tatcaacggc tacttcgtgc ctccagtcgc cgacgccctt cagttctatc ccgtcccgcc
     1021 gtgccgtgtt ctggatactc gaaatcccga tggcgacttt ggcggaccgt ttctcgccgc
     1081 cgtcgttgcc cgctccttcg cgatcggctc cagttcctgc gggacgattt cgaacgccgc
     1141 ggcgtactcg ctgaatgtga ccgtggtacc ccatggaacc ctcggctatc tgacagcgtg
     1201 gcccaccggc cagccgcagc ccctcgtctc cactctcaac tcgctcgatg gcacaattct
     1261 cgccaacgct gccatcgtac ccgctggaac cggcggcgaa gtgagcttct tcggcgcaaa
     1321 cgatacggat ctggtggtcg acatcaatgg ttacttcgcg cctcccgcgg ccggaggtct
     1381 caacttctac gccacaaccc cgtgtcgcct tgtggacacc cgcaatccgg atggcaccta
     1441 cggcggtccg gtaatcgcag ggcaatcgac aaggagtttt cctttggcgg acgccgcctg
     1501 cgggttgc
//
LOCUS       DATAVD010001598         4800 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1268722, whole genome shotgun sequence.
ACCESSION   DATAVD010001598 DATAVD010000000
VERSION     DATAVD010001598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4800
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1268722"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..518
                     /locus_tag="VHX39_30565"
     CDS             <1..518
                     /locus_tag="VHX39_30565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEX3995537.1"
                     /translation="TGYYTAILAELAGSVDGFEIETALAAEAATNLAPWPNVTVHAES
                     AVGRPLPEADAIYVSAGATHSDPFWLDALRDRGRLLFPLTGNDQSGGMLLVTRVGDAF
                     AARFISECGFIDCAGLRDPVTASHLTQVFQAGGKEQVRSLTRQPPRGATVWFAGDSWY
                     LSTDPPASERP"
     gene            515..1066
                     /locus_tag="VHX39_30570"
     CDS             515..1066
                     /locus_tag="VHX39_30570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995538.1"
                     /translation="MTTEPVVVTVPLLDDTLDPPPPSRVRALKRHLVQSLRDLRNAKR
                     PERLVQKTTPEPAGFTAAVLRAGCATCQGHCCKGGGDHAYIDERTMARVRRNNPELDA
                     RAIIGLFLARLAPVAYRGSCLFHGTAGCTLGRGLRAELCNAYYCNGLQEFLQRQTVPE
                     RVQIVATRNGIERRSPVLSRADP"
     gene            1559..3154
                     /locus_tag="VHX39_30575"
     CDS             1559..3154
                     /locus_tag="VHX39_30575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEX3995539.1"
                     /translation="MGYRHPTPIQEQAIPVILMTRDVLGVAQTGTGKTAGFTLPMLDI
                     LAGSRARARMPRSLILEPTRELALQVAENFVQYGRYLKLTHALIIGGESMSDQKDVLN
                     RGVDVLIATPGRLIDMFERGTILLTDTRILVIDEADRMLDMGFIPDVERIVSLLPKTR
                     QTLFFSATMGPEIKRLADAFLQNPKEITVSRSASVAVGITEGLALVAEHDKREALRRL
                     IRTQNVQNALIFCNRKTEVDILHKSLVRHKFSAGALHGDMAQTVRFTTLEKFKAGELR
                     LLVCSDVAARGLDIGGLSHVFNFDVPHHAEDYVHRIGRTGRAGLEGHAFTIAMPEDRM
                     AVEAIEKLTGHPIPPMIVEGLDPVDWAEFDGRKRRGRKAPAGKKAAPAKTVRGKRAGR
                     DQVRSPDAARPRQPGHAVPEIAAETAPMAAPQEEFVAPHASASEGDEQPRVPMHDRAS
                     QPRGRDSAPRMRPPHGDSRRGEPRRDDTGRGAAAAREERPAEHRRERYRQEDLGPAVV
                     GFGDDIPAFMMVRRLVPVPETDA"
     gene            3151..4356
                     /locus_tag="VHX39_30580"
     CDS             3151..4356
                     /locus_tag="VHX39_30580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEX3995540.1"
                     /translation="MNDQPVKPASHFTAFQWDDALRLDAELSEDERAIRDAAREFCQD
                     KLFPRVLMANRWEKFDREIMNEMGEMGFLGATLEGYGCAGVNYVSYGLISREVERVDS
                     GYRSAFSVQSSLVMYPIYAFGSEQQREKYLPRLRTGEFVGCFGLTEPDAGSDPASMRT
                     RARAVDGGFVLNGSKTWITNAPIADVLVVWAKDDKDDIRGFILERGMKGLTQPKIEGK
                     FSLRASVTGMIMMQDVFVPAENMLPNVRGLRGPFSCLNNARYGIAWGALGAAEFCWHA
                     ARDYTLQRMMFGRPLAATQLIQKKLADMQTEITLGLHAVLRLGRLMDAHDAAPEMISL
                     LKRNNCGKSLDIARMARDMHGGNGIVDEYHVIRHVMNLETVNTYEGTHDVHALILGRA
                     QTGLSAFGG"
     gene            4372..>4800
                     /locus_tag="VHX39_30585"
     CDS             4372..>4800
                     /locus_tag="VHX39_30585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HEX3995541.1"
                     /translation="MSRVALPSETVIEFVGADGDGIGAHPDGGRLYVPLTVPGDRVRV
                     QPLARRGDGWLAEVESFLDYGVERRTPICGHFGVCGGCTSQHWDEASYLTWKTGRLAS
                     ALRRAGFDEPVIAPIVRGSAGTRRRMDLAVRRGAGVLSVGL"
BASE COUNT          867 a         1409 c         1612 g          912 t
ORIGIN      
        1 gcactggata ttacaccgcc atcctggccg agctggccgg ttcggtggac ggtttcgaaa
       61 ttgaaaccgc gctggcggct gaggcagcga ccaatctggc accctggccc aatgtcaccg
      121 tgcacgcgga aagtgcggtg ggacggccct tgccggaggc ggacgcgatc tatgtcagcg
      181 ctggcgcgac ccattctgac ccattctggc tcgatgcctt gcgggaccgt ggccgcctgc
      241 tgtttccgct gaccggcaac gatcagtcgg gcggcatgtt gctggtcacc cgggtgggcg
      301 acgcgtttgc cgctcgtttt atctcggaat gcggcttcat cgactgtgcg ggcctgcgcg
      361 atccggtcac cgcctcgcat ctgacgcagg tgtttcaggc cggcggcaag gagcaggttc
      421 gttcgctgac ccgccagccg ccgcgtggcg cgacggtctg gttcgccggg gacagctggt
      481 atctctcgac cgatccgcct gcatcggagc gaccatgacg accgagcctg ttgtcgtgac
      541 ggttccgtta ctggatgaca cgctggatcc gccaccaccc tcccgggtgc gagcgttgaa
      601 gcggcatctg gttcaatcgc tgcgcgatct gcgcaacgcc aaacggccgg agcggctggt
      661 gcagaaaacg acaccggaac cggcgggctt taccgccgcg gtacttcgcg ccggatgtgc
      721 cacctgtcag ggccattgct gcaaaggtgg cggcgaccac gcctatatcg acgagcgaac
      781 catggcgcgt gtgcggcgca acaaccccga actggatgct cgcgccatca tcgggctgtt
      841 tctggcgcgt cttgcgccgg tggcgtaccg cggctcgtgt ctgtttcatg gaactgccgg
      901 ctgcacgctt ggccgaggat tacgggcaga attgtgcaat gcgtattact gcaatgggct
      961 ccaggaattt ttgcagcgac aaacggttcc ggaacgagtc cagattgtcg caacacggaa
     1021 tggaattgag cggcgctcgc cggttctgtc gcgtgccgac ccgtagagac ggacacggta
     1081 tgcgcgctgc gtggagctgt gtcaccaaac tgttaagccc tatcgctctt gacttttgcg
     1141 atccttattc ggataccggc tttgttccgg gctggctcgc gcgcaaaatt ctgccatgta
     1201 cccggttgtc gcgaatcgat ccgcggcctt caaaacgaat ggatacaatt tgactgatac
     1261 agatcccgcc caggtggagc aggacgaaat cttgtcagga ccggaacggt ccgtggcggg
     1321 acatgacccg gatcaggcgg acgagacgac ctcgcttgcg gccgaaccgg aggatgcggt
     1381 tcaggcggcg gacgtcgccg gcgaaccgga tgaaccgggc ggatatgaat acgacgatga
     1441 cctggaacag gatcaggatg cggcgtacgc agcgcatctc gctgaggcgg atgaaccggc
     1501 gcgtaccgtg tttgctgatc tcgggttgtc cgatgaagtg ctccgggcta tcgccgacat
     1561 gggatatcgc catccgacgc cgattcagga acaggccatc ccggttattc tgatgacgcg
     1621 cgatgtgctc ggcgtggcgc aaaccggcac cggcaagacc gccgggttca ccttgccgat
     1681 gctggacatt ctcgcgggtt cacgggcgcg cgcacggatg ccgcgcagcc tgatcctgga
     1741 gccgacacgc gaactcgcgt tgcaggtcgc cgagaatttt gtgcaatacg gtaggtacct
     1801 gaaactcacc cacgcgttga tcatcggtgg cgagagcatg tccgaccaaa aggacgtgct
     1861 caatcgcggc gtcgacgtgt tgatcgcgac ccccggccgg ctgatcgaca tgttcgagcg
     1921 tggcacgatc ttgctgaccg acacgcgcat tctggtgatc gacgaagccg accggatgct
     1981 ggacatgggc ttcattccgg acgtcgagcg gatcgtttcg ctgctgccga aaacaaggca
     2041 gaccttgttc ttctcggcaa ccatggggcc ggagatcaag cggctcgccg atgcgttcct
     2101 gcagaacccg aaggagatca ccgtctcgcg ctcggcgagc gtggcggtgg ggatcaccga
     2161 aggcctcgcg ctggtggccg agcatgacaa acgcgaggcg ctgcggcgat tgatccggac
     2221 gcaaaacgtg caaaacgcgt tgatcttctg caatcgcaag accgaggtgg atattctgca
     2281 caaatcgctg gtgcggcata aattttccgc cggcgcgctg catggcgaca tggcacagac
     2341 ggtgcggttt accacgctgg agaaattcaa ggccggcgaa ctgcggctgc tggtgtgcag
     2401 cgacgttgcc gcgcgcggtc tggatatcgg cggcctgtcg catgtgttca atttcgacgt
     2461 gccgcatcat gccgaggatt acgtgcatcg aattggccgt accgggcgcg ccggtctgga
     2521 aggccacgcc ttcaccatcg cgatgccgga agaccgcatg gcagtcgagg cgatcgagaa
     2581 actgaccggt caccccatcc ccccgatgat cgtcgaaggt ctcgaccccg tcgactgggc
     2641 tgaattcgac ggccgtaagc ggcgtggacg caaagcgccc gccggcaaga aggccgctcc
     2701 ggcgaagacg gtgcgcggca aacgcgctgg gcgcgatcag gtacgctctc cggatgcggc
     2761 aaggccacgg caacccgggc atgccgtacc ggagatcgcg gcggaaacgg cgcctatggc
     2821 tgcccctcag gaggagtttg tggcaccgca cgcgtcagca tcggaaggcg atgagcaacc
     2881 ccgcgtcccc atgcacgacc gggcgagcca accgcgcggc cgtgactccg cgccgcggat
     2941 gcgtccgccc catggggatt caaggcgtgg ggaaccgagg cgggacgata cgggccgtgg
     3001 cgctgcggca gcgcgcgagg agcggcctgc tgagcatcgc cgggaacgtt atcgccagga
     3061 agatctcggt cctgcggtgg tcggatttgg tgacgacatc cccgccttca tgatggtgcg
     3121 ccgactggtg ccagtgccgg agaccgacgc atgaacgatc agcctgtgaa acctgcaagc
     3181 catttcacgg catttcaatg ggacgacgca ctgcggctgg acgcggaatt gtccgaggac
     3241 gaacgcgcca tccgcgacgc cgcacgggag ttctgccagg acaaactgtt cccgcgcgtg
     3301 ctgatggcca accggtggga aaaattcgac cgcgagatca tgaacgaaat gggtgagatg
     3361 gggtttctcg gcgcaaccct ggaaggctac ggctgtgccg gcgtgaatta cgtcagctat
     3421 ggcctgatct cccgtgaagt ggagcgggtc gattccggct accgctcggc gttttcggtg
     3481 cagtcgtcat tggtgatgta tccgatttac gcattcggtt cggagcagca acgggagaaa
     3541 tatttgccgc ggttgcgcac cggggagttt gtcggatgct tcgggttgac cgagccggac
     3601 gccgggtccg acccggcctc gatgcggacc cgggcgagag cggtcgatgg tgggttcgtg
     3661 ctgaatggtt cgaagacctg gatcaccaac gcgccgatcg ccgacgtttt ggtggtgtgg
     3721 gccaaggacg acaaggacga catccgcggc ttcatcctgg aacgcggcat gaaaggcctg
     3781 acgcagccga aaatcgaagg aaaattttcg ctgcgggcgt cggtcaccgg catgatcatg
     3841 atgcaggacg tgttcgttcc ggccgagaac atgttgccga acgttcgcgg gctgcgtggt
     3901 ccgttttcct gtttgaacaa cgcgcggtac ggcattgcct ggggcgctct cggtgcggcc
     3961 gagttctgct ggcatgcggc gcgcgactat accctgcagc gcatgatgtt cggccggcca
     4021 ttggcggcga cgcaactaat ccagaagaaa ctggccgata tgcagacgga gattactctg
     4081 ggtttgcatg cggtgttgcg gttaggccgg ctgatggacg cgcatgatgc ggcaccggaa
     4141 atgatcagcc tgctgaaacg caacaattgt ggcaaatccc tggatattgc ccggatggcg
     4201 cgcgatatgc acggtggcaa tggtatcgtc gatgagtatc atgtcattcg ccacgtcatg
     4261 aacctggaaa ccgtcaatac ctatgaggga acgcacgatg tgcatgcgtt gatcctgggt
     4321 cgggcgcaga ccggtctttc ggcctttggt ggctgacgtc cgcgggacgg catgagccgg
     4381 gtcgcgctgc cgtccgagac cgtcattgag ttcgttggcg ccgatggcga cggaattggc
     4441 gctcatccgg atggtggtcg gctttatgtc ccactgactg tgccaggcga tcgcgtccgc
     4501 gtgcagcctc ttgcacgacg gggtgacggc tggctggccg aagtcgaatc gtttcttgac
     4561 tatggtgtgg agcggcgcac gccgatttgc ggccactttg gggtgtgcgg cggctgcacc
     4621 tcgcagcatt gggacgaggc gtcgtatctg acctggaaaa ccggccgcct ggcctctgcg
     4681 ctgcgccgcg ccggctttga cgagccggtc attgcgccga tcgtgcgcgg ttctgccggc
     4741 acccgccgcc gaatggatct ggcggtgcga cgcggcgccg gcgtgttgtc ggtcggtctg
//
LOCUS       DATAVD010001599         1546 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2944704, whole genome shotgun sequence.
ACCESSION   DATAVD010001599 DATAVD010000000
VERSION     DATAVD010001599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2944704"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            248..679
                     /locus_tag="VHX39_30590"
     CDS             248..679
                     /locus_tag="VHX39_30590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="group III truncated hemoglobin"
                     /protein_id="HEX3995542.1"
                     /translation="MDIAEPKLAYSVTETSIALLIDRFYAAVRHDTVLAPVFNSTIAD
                     DEWPEHLETMRRFWSSVMLTSGRYSGNPVAVHRAVQGLERPMFARWLALFEATVQDLF
                     APEPASQFITKANRIATSLQLALFHRLGAPPDGLAARARGN"
     gene            684..1136
                     /locus_tag="VHX39_30595"
     CDS             684..1136
                     /locus_tag="VHX39_30595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEX3995543.1"
                     /translation="MRLTAYTDYTLRTLMYLAVNADKLATIAEIARTYRISETHLMKV
                     VHQLGIAGDIETIRGRNGGLRLSKPAGVINLGTVVRRTEEDMDLVACFDGSSICAISE
                     ICMLQAVLHEALGAFLAVLDRFTLADLVVPRANLARLLGISASSGTSE"
     gene            1144..>1546
                     /locus_tag="VHX39_30600"
     CDS             1144..>1546
                     /locus_tag="VHX39_30600"
                     /inference="COORDINATES: protein motif:HMM:NF013934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEX3995544.1"
                     /translation="MDPEIAAWRRQQRTALLAKRETLSPEDRQRAAQYVAERLSRHVA
                     ACGCSSIGLYWPIKHEINLLPWAERTGLVLCLPVVIKRNAPLEYWRWKQGEPLGRGFW
                     DIPVPASRDVVVPDLMLAPMVGFDQANYRLGY"
BASE COUNT          292 a          510 c          453 g          291 t
ORIGIN      
        1 cgttgtttgc cggtatttgg atcatcttga cggcatgccg gaattcgaat tgccgtcggg
       61 agatagcgtg tgggaggcgt tgcggcctgt ctgataacgc ctaccggtaa ccaactgacg
      121 gagcagccgg ctgcgttcct cggccgcacg gcgtctgaaa tccccagatc cggccgccaa
      181 tcgccgattg cgcccggttt gcgtgggtgt tataagatgt acaacagatc aatcttaagg
      241 ccgtcccatg gatatcgccg aaccgaagct cgcctacagc gtcaccgaaa cctcaatcgc
      301 gctgctgatt gaccgcttct acgccgcagt ccgccacgac accgttttgg cgccagtgtt
      361 caactctacg atcgcggacg acgaatggcc ggaacacctc gaaaccatgc gccgcttctg
      421 gtcctcggtc atgctcacgt ccgggcgata ttcgggcaat ccggtcgccg tccaccgtgc
      481 cgtccagggt ctcgagcggc cgatgtttgc gcgctggctc gcattgttcg aggccaccgt
      541 gcaggacctg ttcgcgccgg agccagcttc tcagttcatc accaaagcga accgcatcgc
      601 caccagtctg cagctcgcac tgttccaccg ccttggcgcc ccaccggacg gtctggcagc
      661 gcgcgctcgc ggaaattagc cggatgcggt tgaccgccta taccgactac acgctgcgaa
      721 ccctgatgta tctggcggtc aacgccgaca aactggcgac gatcgccgag atcgctcgca
      781 cgtatcgcat ctcggagacc cacctcatga aggtcgtgca ccaactgggc atagccggcg
      841 acatcgagac aattcgcggc aggaacgggg gacttcgcct cagcaagccg gcgggcgtca
      901 tcaacctcgg cacggtggtg cgccgaaccg aggaagatat ggacctcgtc gcctgcttcg
      961 atggttcctc catttgtgcc atcagcgaaa tctgcatgtt acaggccgtg ctgcacgagg
     1021 cacttggcgc attcctcgcc gtgctggacc gatttaccct ggcggacctg gtcgtcccac
     1081 gggccaacct ggccaggttg ctggggatca gcgcctccag cggcacctcg gagtaatacg
     1141 aacatggacc ccgagatcgc agcgtggcga cgacagcaac ggaccgcact gctcgccaaa
     1201 cgcgagacat tatcgcccga agaccgccaa cgcgccgccc agtacgtcgc cgaaagactg
     1261 agccgacacg tcgcggcatg cggctgttcc agcattggcc tctattggcc gatcaaacac
     1321 gaaatcaacc tgctgccctg ggcggagcgc accggtctgg tgctctgcct cccggtggtg
     1381 atcaaacgca atgcgcctct ggaatactgg cgctggaagc aaggcgaacc cctcggccgc
     1441 ggcttctggg acattcccgt gcctgccagc cgcgacgttg tggtccccga tctgatgctc
     1501 gcaccgatgg tcgggttcga tcaggcgaat taccggcttg gctacg
//
LOCUS       DATAVD010001600         2377 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2198814, whole genome shotgun sequence.
ACCESSION   DATAVD010001600 DATAVD010000000
VERSION     DATAVD010001600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2377
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2198814"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..200)
                     /locus_tag="VHX39_30605"
     CDS             complement(<1..200)
                     /locus_tag="VHX39_30605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995545.1"
                     /translation="MNNSVPTAALRGGRLTCMFITLLLQILLWQSDAYAGNGGEATAE
                     MIAKVMPAVVRIVTVRPAHPIK"
     gene            863..1816
                     /gene="mdh"
                     /locus_tag="VHX39_30610"
     CDS             863..1816
                     /gene="mdh"
                     /locus_tag="VHX39_30610"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEX3995546.1"
                     /translation="MARNKIALIGAGNIGGTLAHLIGLKELGDVVLFDVFGGVAAGKA
                     LDIMQSGPVDGFDSLMTGGSDYAAIKGSDVVIVTAGFPRTPGMSRDDLIGQNAGVIAQ
                     VAEGIKTHCPDAFVICITNPLDAMVWVMKEKSGLPANRVVGMAGVLDSSRFQLFLAQE
                     FGVSVEDVRAFVLGGHGDTMVPLTRYSTVAGIPVPDLIKMGWTSQQNIDAIVKRTADG
                     GGEIVRLLERGSAFYAPAASAIAMAEAFLKDKKRVLPCAAWLTGQYGMNELYVGVPVV
                     IGAGGIEKIVEIQLNPQEKAAFEKSCAAVRELVDAAKKLIG"
     gene            1821..>2377
                     /locus_tag="VHX39_30615"
     CDS             1821..>2377
                     /locus_tag="VHX39_30615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEX3995547.1"
                     /translation="MNIHEYQAKELLKRHGVAVLDGYVAWTADEAAAAAAKLPGPVFV
                     VKSQIHAGGRGAGHFEDDPKGKGGVRVTRSIDEVRSAADAMIGHVLVTKQTGASGRPV
                     HRVYVEAGCDIARELYFSLLVDRATGRITLVASTEGGMEIEEVAANHPEKILRVAIDP
                     TTGLSGHHIRRLNFGLGLAGEQARS"
BASE COUNT          475 a          696 c          740 g          466 t
ORIGIN      
        1 tgctttatcg gatgagcagg tcgcaccgtg acaatccgga caacggccgg catcactttt
       61 gcaatcatct cggcggtggc ctcgccacca ttgccggcat aggcatcgct ctgccagagc
      121 aaaatctgca gcagcaaagt aataaacatg caagtcaaac ggccaccacg aagggcggcc
      181 gttggaaccg aattattcat ggccggtgcc gagctttgat ctcggttgtc gtcaacaggc
      241 cggaatgagt cctgtcacct tccattggcc gcctcccggc atctgctgta gatcgcaacc
      301 acgcatagac ctctccatcc ggtactttta ccaagaattt ccaagaattg cgggcaaacg
      361 cgacaatcgt acgtcgcgaa accccaccca gttggagtgt tggtcgtacc ttcagcggtt
      421 aacgcgacag ccatgagcaa gttccgattg atctacgatc tggatttcac gtgcagcagg
      481 ctgagattct ctggcgatat tttgttgcga tccaaaacca ttggcgggaa gcaacctggt
      541 tatgaagacg caaaacgttc ctatcatgtt cgggtgatcc ccgtctcagc gcggcgcgca
      601 cccacaaatc atgctcgacc aacggtcgat ccgacaccaa catcgtacgg agccccgacc
      661 cgccgcccac cggatcctcg gccattctgg tcggcagacc cgggacctta tatgctgcaa
      721 tgcatcatac ttgccgggtg cggtgcgatc cgctagcaac acggcgcttg cgggccggcc
      781 tctggtcgga cgagccgacc ctgggccaac gcataagtgt caccatggcg tgcctggcgg
      841 cgcgtctcga aaggatagcc tcatggcccg caacaagatc gcgctgattg gtgccggtaa
      901 catcggcggc acgctcgccc acctcatcgg cctcaaagaa ctgggcgatg tcgtcctgtt
      961 cgacgtgttt ggcggcgtgg ccgccggcaa ggcgctcgat atcatgcagt ccgggccggt
     1021 ggatgggttc gactcgctga tgaccggagg gtcggattat gcggcgatca aaggctcgga
     1081 cgtcgttatc gtcaccgcgg gctttccgcg cacccccggc atgtcgcgcg acgacctgat
     1141 cggccaaaac gcgggcgtta tcgcccaggt ggccgagggg atcaaaaccc actgcccgga
     1201 tgcattcgtg atctgcatca ccaacccgct cgacgcgatg gtctgggtga tgaaggaaaa
     1261 gtcaggcctg cctgccaacc gggtcgtcgg catggctggc gtgctcgaca gcagccggtt
     1321 tcagttgttc ctggcgcagg aattcggcgt ctcggtcgaa gacgtgcggg ccttcgtgct
     1381 tggcggtcac ggcgacacca tggtgccgct gacccgttac tctacggtgg ccggcattcc
     1441 agtgccggac ctgatcaaga tgggctggac ctcgcagcaa aatatcgacg cgatcgtcaa
     1501 gcggacggcg gacggcggcg gcgagatcgt ccggttgctg gagcgcggca gtgcgttcta
     1561 tgcgcccgcc gcttcggcaa tcgcgatggc tgaagcattc ctgaaagaca agaagcgcgt
     1621 attgccttgc gccgcgtggc tgaccggcca atacggcatg aatgagcttt acgttggcgt
     1681 gcctgtggtc atcggcgccg gcggcatcga gaagatcgtt gagattcaat tgaacccgca
     1741 ggagaaggcc gcattcgaaa aatcttgtgc cgcggtgcga gaactggtgg atgcggcaaa
     1801 aaaactgatc ggctgagccg atgaatatcc acgaatacca ggccaaggaa ctgctcaaac
     1861 gccacggcgt tgcggtgctg gacggttacg ttgcatggac cgcagatgaa gcggcggcgg
     1921 ctgcggcgaa actcccgggg ccggtgttcg tggtaaagtc gcaaatccat gctggaggcc
     1981 gcggcgcggg acactttgaa gacgatccga aaggcaaggg cggggtccgg gtcactcgct
     2041 cgatcgacga ggtgcgctct gccgcggatg cgatgatcgg gcatgtgctg gtgacgaagc
     2101 agaccggcgc atccggccgt cccgtgcatc gggtttatgt cgaggcgggc tgcgacattg
     2161 cccgtgaact gtacttctcc cttttggtcg atcgggcgac cggtcggatt actttggtcg
     2221 cttcaacaga aggcggcatg gagatcgagg aagtcgcggc caaccatccc gagaaaattc
     2281 tgcgcgttgc gatcgatcca accaccggtc tgtccggtca tcacatcagg cggctgaact
     2341 tcggtttggg tctggcgggt gagcaggctc gctcgtt
//
LOCUS       DATAVD010001601         3727 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2012785, whole genome shotgun sequence.
ACCESSION   DATAVD010001601 DATAVD010000000
VERSION     DATAVD010001601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3727
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2012785"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..476)
                     /locus_tag="VHX39_30620"
     CDS             complement(<1..476)
                     /locus_tag="VHX39_30620"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: protein motif:HMM:NF015299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEX3995548.1"
                     /translation="MIYERTIRKSVECSGVGLHSGAPVQLRIVPAQTGTGIVFRRTDL
                     DGFEVEAISRNVAKVSYATSLMKKGVLISTTEHLLSAFIGMGVDNAIVELDNLEVPIL
                     DGSAQPFVEMITAAGVRQQRRKRVYLKILRPYEMHEGDKFIGVYPGERYSVSYAID"
     gene            896..2071
                     /locus_tag="VHX39_30625"
     CDS             896..2071
                     /locus_tag="VHX39_30625"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF006942.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEX3995549.1"
                     /translation="MIVGVPRESFPGERRVALVPGVIPNLAKVGLEVVIEAGAGLEAG
                     YPDADYTNKGAQIVASRGDVFAAADIVVQVLCYGSNDRTGQADVSFYKRGQVLIGFLR
                     PLGAVQTLQDIASAGVTSFSVELMPRITRAQSMDALSSMGTICGYKAVIIGADKLPRI
                     FPMLTTAAGTITPSRVLVIGAGVAGLQAIATARRLGAVVSAYDLRPAVKEQVQSLGGR
                     FVELPIEAADAQDAGGYAKAQDEAFYQKQRELLGRVVAESDVVITTAVVPGKKSPVLV
                     TKEMVAAMNPGSVIVDLAAERGGNCELTKSDEVVSIHNVTLVGTINLASSVPYHASQM
                     YAKNLTNFLVHLVKDGVLQINMGDEITRSTLLTHQGEVANPRVREFFNLPALATAQP"
     gene            2095..2391
                     /locus_tag="VHX39_30630"
     CDS             2095..2391
                     /locus_tag="VHX39_30630"
                     /inference="COORDINATES: protein motif:HMM:NF024179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HEX3995550.1"
                     /translation="MPPDFISNLYVFILAGFVGFGVIRRVSPLLHTPLMSLTNALDAI
                     VVVAAIIIAGRHETPLTTTLGAIAVAASFSNMVGGFLITDRMLRMFKSRGSKES"
     gene            2388..>3727
                     /locus_tag="VHX39_30635"
     CDS             2388..>3727
                     /locus_tag="VHX39_30635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007091102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEX3995551.1"
                     /translation="MNGIELQQYLDFAYIVAVVLFILSLKFLSSPTTARWGVLAGEVG
                     AALAVAVTLFNPEVVQYKWVIIPLIIGAGIGVPLGLVHMTAVPQRTALSHAFGALSAA
                     MIGIAEFYVGTAPVTRFAMGEISLEVIIGSLTFTGSLIAAGKLQEILPQRPIVYRGQN
                     IVSLTVLAGALALAVALVVNPANTLLFPVMVVVALIFGVLLVTPIGGADMPTVISLLN
                     SYAGISAALLGFVLNSKVLVVAGALDGSSGLILSIIMCKAMNRSFTNVMFGAFGQVQV
                     SAAGAKEERVVRSATPEDAASMLAAANSVVIVPGYGMAVAQAQHKVRELYDLLSKKGI
                     DVRFAIHPVAGRMPGHMNVLLAEADVPYDRLIEMDEINGDLPQTDVALVIGANDVTNP
                     AARSDTGSPIYGMPIIDVDKARTVMVIKRSMNPGFAGIDNPLYYLDNTLMLFGDA"
BASE COUNT          710 a         1082 c         1167 g          768 t
ORIGIN      
        1 aagtcgatgg cgtagctgac cgagtagcgc tcgccgggat agacgccgat gaacttgtcg
       61 ccctcgtgca tttcgtaggg acgcaggatc ttgaggtaga cgcgcttgcg gcgctgctgg
      121 cgtacaccgg cggcggtaat catctcgacg aacggttgcg cgctgccatc caggatcggc
      181 acctcaaggt tgtcgagctc gacaatggca ttgtcgacgc ccatgccgat gaaggccgag
      241 agcaggtgct cggtggtcga gatcagcacg cccttcttca tcagactagt ggcgtagctg
      301 accttggcga cgttgcggct gatggcctca acctcaaagc catcgagatc agtgcgccgg
      361 aagacgatgc cagttccggt ttgtgccgga acgatgcgaa gttgaaccgg agctccgctg
      421 tggaggccga cgccactaca ttcgactgat ttgcggattg tacgttcgta gatcaaaatt
      481 cggcagacgt taagagcagc gcatgcaata gattatcggg tcgacaagct tcagggttgt
      541 tgtattttca ccacaacccg tgttgaaaca acacgtccaa tgcgggacaa aactgtcgaa
      601 aatggggcta aggtgctagc agttaacagc ttagccgcac gccgacaaat cctggccgga
      661 tcggcacatc ccaaccagct tctccgaagg taccgagttc agcacgtgta agaacccgaa
      721 aaccaccccg gagttgcagg gcgggtcctg gtctggccgg ccgcggcgcg ggtaagccgt
      781 caggttcact ccttgtcagt gcgctggaca ttcggcgcgt cctgcgtaga atgctccttt
      841 ccgctcaacg cgttgcttcg gcatcgtcgc gtccgaaaga gtgcaaggag gccctatgat
      901 tgtcggtgtt ccccgggaaa gctttcccgg cgagcgtcgt gtggccctgg tacctggcgt
      961 gattcccaat ctcgccaaag tgggtctgga agtggtgatc gaggcgggag ccgggctgga
     1021 agccggctat cccgatgcgg actacaccaa caaaggcgcc cagatcgttg ccagccgcgg
     1081 cgacgtcttc gcagccgccg acatcgttgt ccaggtcctc tgctacggct ccaacgatcg
     1141 caccggtcag gctgacgttt ccttctacaa acggggtcag gtgctgattg gctttctgcg
     1201 gccgctcggc gcggtacaaa cgctgcagga catcgcctct gccggcgtga cttcgttctc
     1261 cgtggagctg atgccgcgca ttacgcgcgc gcagagcatg gacgccctgt cgtcgatggg
     1321 caccatctgc ggctacaagg ccgtgattat cggggccgat aagctgccac ggattttccc
     1381 gatgctgacc accgccgctg ggacgatcac tccgtcacgc gtgctggtga tcggtgcggg
     1441 cgtcgcgggt ttgcaggcaa tcgcaaccgc acggcgttta ggcgcggtgg tgtcggctta
     1501 tgatttgcgg ccggcggtga aagaacaggt gcagagcctg ggcgggcgct ttgtcgaact
     1561 gccgatcgag gcggccgatg cgcaggatgc gggcggctac gccaaggcgc aggacgaggc
     1621 tttctaccag aagcagcgcg aactgcttgg cagagtcgtt gccgaaagcg atgtcgtcat
     1681 cacgacggcg gtcgttcccg gcaagaagtc gccggtgctg gtgacgaaag agatggtcgc
     1741 ggcgatgaat ccgggatcgg tgattgtcga tctggcggcc gagcgcggcg gcaactgcga
     1801 actgaccaag tccgacgagg tcgtctcgat ccataacgtg acgctggtcg gcaccatcaa
     1861 tctggccagc tcggttccgt atcatgccag ccagatgtac gccaagaacc tgacaaattt
     1921 cctggtgcac ctggtgaagg acggtgtgtt gcagataaac atgggcgacg aaatcacccg
     1981 cagcaccctg ctcacgcacc agggcgaagt cgccaatcca cgggtacggg aattcttcaa
     2041 cctgccggcg ctggcgacag cgcaaccatg atgctcgaaa agaagaggag ctaaatgcca
     2101 ccggatttca tttcgaatct ctacgttttc atcctcgccg gatttgtggg ctttggagtc
     2161 atcagacggg tttcgccttt gctgcacacg cccctgatgt cgttgaccaa cgctctggat
     2221 gcgatcgtgg tggttgccgc catcatcatc gccggccggc atgagacgcc gctcaccacc
     2281 acgcttggcg caattgcggt ggcggcatcg ttcagcaaca tggtcggcgg attcctgatc
     2341 accgaccgca tgctgcgcat gttcaaatct cgcgggtcga aagaatcatg aacgggatcg
     2401 agttacagca gtacctcgac ttcgcataca ttgtcgcggt tgttctcttc attctctcgc
     2461 tcaaattcct gagttcgccg accacggcgc gctggggcgt tctggcggga gaagtcggcg
     2521 cggcactggc ggttgcggtc acgcttttca accccgaggt ggtgcagtac aagtgggtga
     2581 tcatcccgct gatcatcggc gcgggaatcg gcgttcccct cggcctggta cacatgacgg
     2641 cggtgccgca acgaaccgca ctgagccacg cgttcggcgc gctttcggcg gccatgatcg
     2701 gtattgccga attttacgta gggactgctc cggtcacgcg cttcgccatg ggcgagatct
     2761 cgctcgaagt catcatcggc tcgctgacgt ttaccggcag cctgatcgcc gcgggcaagt
     2821 tacaggaaat actgccgcag cggcccatcg tctaccgcgg gcagaatatc gtcagcctga
     2881 cggttctggc cggagcgttg gcgctggcgg tggctttggt ggtgaatccg gcgaacacct
     2941 tgctgttccc ggtcatggtg gtagtggcgc tgatcttcgg agtgttgctg gtcactccga
     3001 ttggcggcgc cgacatgccc acggtcatct ctctgctgaa ctcctacgcc ggcatttcgg
     3061 cggcgctgct gggatttgtg ctgaacagca aagtgctggt ggtggccgga gcgctcgacg
     3121 gctcgtccgg cttgatcctc tcgatcatca tgtgcaaggc catgaatcgc tccttcacca
     3181 acgtgatgtt cggagcgttc ggccaggtgc aggtgtcggc ggcgggagcg aaagaagagc
     3241 gcgtggtgcg cagtgccacg cccgaggatg ccgcctccat gctggccgcg gccaactccg
     3301 tggtgatcgt tcctggatac ggcatggccg tcgcccaggc acagcacaag gtccgcgaat
     3361 tgtatgacct gctgagtaag aagggcatcg atgtccgctt cgccattcat ccggtggccg
     3421 gacgcatgcc cgggcacatg aacgtgctgc tggccgaagc cgatgttcct tatgaccgcc
     3481 tcattgaaat ggacgaaatt aacggcgatc ttccgcaaac cgatgtggcc ttggtgattg
     3541 gagcaaacga cgttaccaac cccgccgcgc gatcggatac cggcagccct atctacggaa
     3601 tgccgattat cgatgtcgat aaggcgcgca cggtgatggt catcaagcgc agtatgaatc
     3661 cgggtttcgc cgggatcgat aacccgctct attacctgga taacacgctg atgctgttcg
     3721 gcgatgc
//
LOCUS       DATAVD010001602         1869 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2384096, whole genome shotgun sequence.
ACCESSION   DATAVD010001602 DATAVD010000000
VERSION     DATAVD010001602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2384096"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            90..323
                     /locus_tag="VHX39_30640"
     CDS             90..323
                     /locus_tag="VHX39_30640"
                     /inference="COORDINATES: protein motif:HMM:NF016152.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEX3995552.1"
                     /translation="MAHDPATVWCKAPRGVQAILVGAAPDRFFVPPYVGHKGWIGFHL
                     DRTTDWAEVAALIHRSYRMTAPKRLAELVSDEA"
     gene            582..1058
                     /locus_tag="VHX39_30645"
     CDS             582..1058
                     /locus_tag="VHX39_30645"
                     /inference="COORDINATES: protein motif:HMM:NF017950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF992 domain-containing protein"
                     /protein_id="HEX3995553.1"
                     /translation="MLKTTLLAAAAVGMALLPVGIPAQAAVGVRAGVLTCNVGGGSGF
                     VFGSSKELSCTYSGNGRVEQYVGTISKFGVDIGYLKSGVILWAVLAPTHNPPPDALAG
                     DYGGLTAGASVGVGASANLLVGGSKHEISLQPLSVGGERGVNVAAGIASLTLRPAS"
     gene            complement(1108..>1869)
                     /locus_tag="VHX39_30650"
     CDS             complement(1108..>1869)
                     /locus_tag="VHX39_30650"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3995554.1"
                     /translation="GIAAMSSSGGYGKTKVCAGIVGYADLTAGDWVTPVLEAQIRAGG
                     GRFRGVRHSAGYDPDPVIGNSAPGIQPGLYLRDDFRAGMKRLSALGLSLDAWGFHPQI
                     PDITGLARSLPYANIIMGHCGGPLGYGRHAGKPGEIFADWKKSISELAKCPNVTIKLG
                     GMMMRLAAFDYMAMEAPPSSEQLADAWRPYIETCIELFGTNRCIVESNFPVEKMGIGY
                     AALFNALKRLAAGGSAEEKAAIFAGTARRVYRLDC"
BASE COUNT          333 a          565 c          606 g          365 t
ORIGIN      
        1 tgcgagtcat ttgtctggcg ctgccggagg cagcggagaa agagacctgg gagatcccga
       61 cgttccggat acgagactaa atcttcgcca tggcgcatga cccggctacc gtctggtgca
      121 aggcgccgcg cggtgtgcag gcgatcctgg tcggggccgc gccggaccgg ttctttgtgc
      181 cgccatacgt tggtcacaaa ggttggatcg gtttccacct cgatcgcacc accgactggg
      241 ctgaggtcgc tgcgttgatc caccgcagct atcgtatgac tgcgccgaaa cgacttgcgg
      301 aactcgtctc cgacgaggcg tagatttcgg cgcggcatcc gttgcaacgc cacacccccc
      361 tatttcccac aactgaaccg gagagctgcc aaacgcaggt tcctcctccg tccggggaac
      421 gtcgtcgcgt ctcgcgcgtt gtgtggcggg gcggagcggc catcgcttcg ggctgtcagt
      481 ctggcaacgg cggcagttcg gcgagcgttg gcccgaagcc tcgcgtcgcg ttcagtctgc
      541 tggcgttgat tatcccaact acctaactgg agcctggcaa catgcttaag acaactcttt
      601 tggctgcggc ggccgtcgga atggccttac tgccggttgg catccccgcg caggcggcag
      661 tcggggtcag agccggcgtg ttgacctgca acgttggcgg cggatccggc tttgtgttcg
      721 gttccagcaa ggaactcagc tgcacctact cgggcaacgg gcgggtcgag caatatgtcg
      781 gcacaatctc gaaattcggc gtggacattg gctatctgaa aagcggcgtg atcctttggg
      841 cagtgctggc accgacccac aatccgccgc cggatgcgtt ggcgggtgac tacggtggat
      901 tgaccgctgg agcctctgtc ggcgttggcg cgtcagcgaa tttgctggtc ggcggctcca
      961 agcacgagat ttcgctgcaa ccgctcagcg ttggcggcga gcgaggcgtc aacgtggcgg
     1021 ccggcattgc gtcgctgacg ttgcgacccg cgtcctgagc taagtactgg ggtcccggca
     1081 gcggtggcag ccgggaccgc agggccatca acaatccaac cggtaaaccc ggcgcgcggt
     1141 accggcaaag atcgccgcct tttcctctgc ggacccgccg gccgcgaggc gcttcaatgc
     1201 gttgaacaag gccgcgtaac cgatacccat cttctcgacc gggaagttgc tttcaacgat
     1261 gcaacggttg gttccgaaca gctcgataca ggtttcgatg tacggccgcc atgcatcggc
     1321 gagttgttcc gatgacggcg gagcctccat cgccatataa tcgaaggcgg ccagacgcat
     1381 catcatgcca cccagtttga tggtgacgtt gggacatttg gcgagttcgg agatggattt
     1441 tttccagtcg gcgaagattt ccccgggttt gccggcatgc cggccatagc caagcggacc
     1501 gccgcagtgc cccatgatga tgttcgcgta cggcaatgaa cgcgcgaggc cggtgatatc
     1561 cgggatttgc ggatggaagc cccaggcgtc gagcgacagg ccaagcgcac tcaatcgttt
     1621 cattccggca cggaaatcgt cacgcagata aagtcccggc tgaatgccgg gggcgctgtt
     1681 gccgatcacg ggatccggat catagccggc tgagtgtctg acgccgcgaa accggccgcc
     1741 gccggcacgg atttgcgctt ccagcaccgg ggtgacccaa tcgcctgcgg tgaggtcggc
     1801 gtaaccgacg atgccggcac agactttggt tttgccgtag ccgccggatg agctcatggc
     1861 ggcgatacc
//
LOCUS       DATAVD010001603         3734 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1268931, whole genome shotgun sequence.
ACCESSION   DATAVD010001603 DATAVD010000000
VERSION     DATAVD010001603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3734
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1268931"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..871)
                     /gene="sucD"
                     /locus_tag="VHX39_30655"
     CDS             complement(<1..871)
                     /gene="sucD"
                     /locus_tag="VHX39_30655"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEX3995555.1"
                     /translation="MSVLVNASTKVICQGFTGAQGTYHSEQAIAYGTKMVGGVTPGKG
                     GTTHLNLPVFDTVWECREKTGADATVIYVPPPFAADAILEAIDAEFPLIICITEGIPV
                     LDMVRVKRALTGSRSRLIGPNCPGVITPDECKIGIMPGHIHKRGTVGIVSRSGTLTYE
                     AVAQTTAAGLGQTSCVGIGGDPVKGTDFIEVLEMFLADPETKQIVMIGEIGGQSETDA
                     ADFLSHNKMKKPVVGFIAGAAAPPGRRMGHAGAVISGGKDTAAAKMDAMRSAGIHVAD
                     SPATLGSTMVEVLK"
     gene            complement(872..2068)
                     /gene="sucC"
                     /locus_tag="VHX39_30660"
     CDS             complement(872..2068)
                     /gene="sucC"
                     /locus_tag="VHX39_30660"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEX3995556.1"
                     /translation="MNIHEYQGKELLKRYGVTVLDGYVAWTPEEAEAAAAKLPGPVYV
                     VKSQIHAGGRGAGRFADDPDGKGGVRLARSPAEVRTAAEAMIGHTLVTKQTGEHGKPV
                     RRVYVEAGCDIARELYVSLLVDRISGRVTIIASTEGGMEIEDVAANHPEKILRVGIDP
                     ASGISGFHGRRLAAGLGLTGKQASSFGKFVAATYQAFTALDCAVIEINPLVVTGAGDV
                     VALDAKVSFDDSALFRHPELEKLRDEAEEDPKELEAAKFELNYVALDGNIGCMVNGAG
                     LAMATMDIIKLYGMAPANFLDVGGGATKERVTAAFKIILSDPNVEGILVNIFGGIMRC
                     DVIAEGVVSAARDVQLSVPLVVRLAGTNVDLGKQILAKSNLPIVAADNLEDAAEKIVK
                     AVREAA"
     gene            complement(2158..3111)
                     /gene="mdh"
                     /locus_tag="VHX39_30665"
     CDS             complement(2158..3111)
                     /gene="mdh"
                     /locus_tag="VHX39_30665"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEX3995557.1"
                     /translation="MARNKIALIGAGNIGGTLAHLIGLKELGDVVLFDVFGGVAAGKA
                     LDIMQSGPVDGFDSAMSGGSDYAAIKDADVVIVTAGFPRTPGMSRDDLIGKNAGVIAQ
                     VAEGIKTNCPNAFVICITNPLDAMVWVMKEKSGLPANKVIGMAGVLDSSRFQLFLAQE
                     FGVSVQDVRAFVLGGHGDTMVPLTRYSTVAGIPVPDLIKMGWSTQAKIDAIVERTANG
                     GGEIVKLLERGSAFYAPAASAIAMAEAYLKDKKRVLPCAAYLSGEYGINDMYVGVPVV
                     IGAGGVEKIVEIELNPTEKAAFEKSCAAVRELIDASRKLIG"
     gene            complement(3353..>3734)
                     /locus_tag="VHX39_30670"
     CDS             complement(3353..>3734)
                     /locus_tag="VHX39_30670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002725554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HEX3995558.1"
                     /translation="KPGRLNPAEFEVMKGHVTASMTYLQDCPDLPKGIGIIAAQHHEK
                     LDGTGYPFGLTGSKLNRLARMASIIDVFTALTDRRVYKREMEAETALKLMVDEMTSHL
                     DMKLLGLFRQMLLDATRTVPQSDG"
BASE COUNT          670 a         1163 c         1180 g          721 t
ORIGIN      
        1 ccttcagaac ctcgaccatc gtgctgccga gggtggcggg gctatcggcc acatggatgc
       61 cggcactgcg catggcgtcc attttggcgg cggcggtatc cttgccgccg ctgatcaccg
      121 caccggcatg gcccatacgg cgacccggcg gcgcggcggc cccggcgatg aagccgacca
      181 cgggcttttt catcttgtta tgcgacagga agtcggccgc gtcggtctcg ctctggccgc
      241 cgatctcacc gatcatgacg atctgtttgg tttcggggtc ggccaggaac atttccagga
      301 cctcgatgaa atcggtgccc ttgactgggt cgccgccaat gccgacgcaa ctcgtctggc
      361 ctaggccagc ggcagtggtc tgtgccacag cttcataagt cagcgtgccg gaacgggaga
      421 cgatcccgac ggtgccgcgc ttgtggatgt ggcccggcat gatgccgatc ttgcactcat
      481 ccggggtgat cacaccgggg cagttcggcc cgatcagacg ggatctggaa ccggtgaggg
      541 cgcgctttac ccgcaccata tccaacaccg gtataccctc ggtgatgcag atgatcagcg
      601 gaaattcggc gtcgattgcc tccaggatcg catctgcggc gaagggcggc ggcacgtaga
      661 tcacggtagc gtcggcaccg gtcttttccc ggcattccca caccgtgtcg aacaccggca
      721 gattgagatg ggtcgtgcca ccctttcccg gtgtcacgcc gccgaccatt tttgtgccgt
      781 aagcgatcgc ctgttcggag tggtaggtgc cctgggcgcc ggtgaaacct tggcagatga
      841 ccttggtcga agcattcaca agaaccgaca tctatgcagc ctcccgcacg gctttgacga
      901 ttttctcggc tgcgtcttcc aaattgtcgg cggcaacgat cggcaggttg gattttgcga
      961 ggatttgctt gcccagatcg acgttggtac cggcgaggcg caccaccaac ggaacggaca
     1021 actgcacgtc gcgcgcggcg gaaaccacgc cttcggcgat gacatcacag cgcatgatgc
     1081 cgccgaagat attgaccaga atgccttcga cattgggatc ggacaggatg atcttgaacg
     1141 ccgccgtcac gcgttccttg gtcgcgccgc cgccgacgtc caggaagttg gcaggcgcca
     1201 tgccgtaaag cttgatgatg tccatggtcg ccatggcgag gccggcgccg ttgaccatgc
     1261 agccgatgtt accatccagc gcgacgtaat tcagttcgaa cttggcggct tccagctcct
     1321 tgggatcctc ttccgcctca tcccgcagct tttccagttc gggatggcgg aacagggcgc
     1381 tgtcgtcgaa gctgaccttg gcatccaggg cgacgacgtc gccggcgccg gtgacaacca
     1441 gtgggttgat ctcgatcacc gcgcaatcca aggcggtgaa agcctgatac gtcgcggcga
     1501 caaatttgcc gaaggaggat gcttgcttgc cggtcagacc gaggccggcg gccagacggc
     1561 ggccgtggaa gccggaaatg cctgacgcgg gatcgatacc aacacggaga atcttctcgg
     1621 gatgattggc ggcgacatcc tcgatctcca tcccgccctc ggtggaggcg atgatggtca
     1681 cacgcccgct gattcgatcg accagcaaag agacgtaaag ttcgcgggcg atatcacagc
     1741 ccgcttcaac gtaaacccgg cgcaccggct tgccatgttc gccggtctgc ttggtgacca
     1801 acgtatggcc gatcatcgcc tcggcggcgg tgcggacctc ggccggggag cgggccagtc
     1861 gcacaccgcc tttaccgtcg ggatcgtcgg cgaagcggcc ggcaccacgg ccaccagcgt
     1921 gaatctgcga cttcacgacg tagaccgggc cgggcaactt ggcggcggcg gcttcagctt
     1981 cttccggcgt ccaggcgaca tacccatcca gcaccgtgac gccgtagcgt ttcagcaatt
     2041 ccttgccctg gtattcgtgg atgttcatgg cgggctcctt gaaccatccc cggttcaggc
     2101 cgaggatggc tgtttgattg acggaccctg gacgttccct gctggtgcga gcgtaattta
     2161 accgatcagc ttgcgtgacg cgtcgatcag ttcccgcacc gcggcgcagg acttttcgaa
     2221 tgcggccttc tcagtcgggt tcagctcgat ttcgacgatc ttctccacac cgccggcgcc
     2281 gataacgacg gggacgccca catacatgtc gttgatgccg tactcgcccg acagataggc
     2341 ggcgcacggc aggacgcgct tcttgtcctt caggtaggcc tcggccatgg cgatcgcgga
     2401 agcggccggc gcatagaagg cgctgccacg ctccagcagc ttgacgatct cgccgccgcc
     2461 gttggcggtg cgctcgacga tggcgtcgat cttggcctgt gtgctccagc ccatcttgat
     2521 caggtcgggc acggggatgc cggcgacggt ggaatagcgg gtcagcggca ccatggtgtc
     2581 gccgtggccg ccaaggacga acgctcggac gtcctgcacc gagacgccga attcctgggc
     2641 aaggaacagt tggaagcggg aactgtcgag cacgccggcc atgccgataa ccttgttggc
     2701 gggcaggccg gatttctcct tcatcaccca gaccatggcg tcgagcgggt tggtgatgca
     2761 gatgacgaac gcgttcgggc agttggtctt gatgccctcg gccacctggg cgatcacgcc
     2821 ggcattcttt ccgatcagat catcgcgcga catgccgggg gtgcgtggga aaccggcggt
     2881 gacgatcacc acgtcggcgt ccttgatcgc ggcgtagtcg gatccgccgg acatagcgga
     2941 gtcgaacccg tcgaccggac cggattgcat gatatccagc gccttgcccg ccgcgacacc
     3001 accgaacacg tcgaacagta cgacgtctcc aagttccttc aggccgatca gatgggcgag
     3061 ggtgccgccg atatttccgg cgccgatcag ggcgatcttg ttgcgggcca tgggcgaatc
     3121 cttatcgagg cgcaatcgcg gcgccgggtg atttgaaacg ggcctgccga gcctgtggcc
     3181 agaggatggc tgcccggacg gtggcgcgta gctagcctat cgggcgaagc ccggcaagac
     3241 ggtgcggtgc agcaaggccg agggccggcc aaggtccgct cgacaaactg tacgccctcc
     3301 aacccttgca gtgtcggtgc caacagttat cgctgctggc ggtcggtcga agtcagccat
     3361 cggactgcgg gactgtgcgt gtcgcatcga gcagcatctg gcgaaacaag cccagcagct
     3421 tcatatcgag gtgcgacgtc atttcatcga ccatcagttt gagcgccgtc tcggcctcca
     3481 tctcccgctt gtagacccgg cggtccgtca aagccgtgaa tacgtctatg atcgaggcca
     3541 tccgggccag ccgattgagc ttgctccccg tcaacccgaa cggatagccg gtaccatcca
     3601 gcttctcatg atgttgcgcg gcgatgatgc cgataccctt tggtagatcg gggcaatcct
     3661 gcagataggt catggacgcg gtcacatgtc ccttcatgac ttcaaactcc gccgggttga
     3721 ggcggcctgg cttg
//
LOCUS       DATAVD010001604         7584 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1825546, whole genome shotgun sequence.
ACCESSION   DATAVD010001604 DATAVD010000000
VERSION     DATAVD010001604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7584
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1825546"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..229)
                     /locus_tag="VHX39_30675"
     CDS             complement(<1..229)
                     /locus_tag="VHX39_30675"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3995559.1"
                     /translation="MHIVMVNNIYPPIMAGGAELVVADLCEGLVERGHQVTVVSTCSP
                     EMEPYPVETRNGVKVIRFFPRNLYWNFTRQHE"
     gene            complement(243..932)
                     /locus_tag="VHX39_30680"
     CDS             complement(243..932)
                     /locus_tag="VHX39_30680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995560.1"
                     /translation="MQSPARQHRSQPRLSAGLRPHGLATGELVKLHHALTDALPAGTG
                     VVTQLVAPEPDVSITHVAYDLAYISASWLDKRVLFVDGTGMRTDAIDTLLPSRLEPVF
                     SASFDPTDLEASISRVVGLELYQMSFPTMRGALDLAPVLRRIPEFMDRLRQTFDLVII
                     ASPSAAEAPMGVLLAPYVDGNVLVLESGRTRGPVAAKLRDALRASGGSVVGVVLTKCR
                     RHAPRWLHRWL"
     gene            complement(1080..2528)
                     /locus_tag="VHX39_30685"
     CDS             complement(1080..2528)
                     /locus_tag="VHX39_30685"
                     /inference="COORDINATES: protein motif:HMM:NF025179.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNVR domain-containing protein"
                     /protein_id="HEX3995561.1"
                     /translation="MIAQPDLRATVVAFLRRKLLFAVVLCLVCGVGAAYLALAQTLYQ
                     STASLVVRFDTPQSVPDIDRSRDPTQPPGSNERREIIYSDADMLHARDVLVGTINAVG
                     LARLYPKIAASDVPETHKMDEAEQQFSSNLVIDVGLQSDVISVTYLNPDAQVAHDVVQ
                     QLLKQFYAQEAAVYANPQLHFSDDEATKARDKLTEAQNALAAFKANNKIADLQQQVMQ
                     LLTQRTDVETRLNIAHARVVEAQQRQAALEELLKNVPSEVSSSAAGEQYHAVDAAETQ
                     LDELLTKRSQMASTYQPDSPVFQQMDAQIASLRKIANQRTSEAKNRAANTPNVVHQNI
                     DTDYLRASAEATSARQPEQVLADQLQGINKQLSALEAERNQYDDMVRTVQIQNDTYRA
                     LAIRYETAKVEANRNAQNISAAAVIAVPSTPNRPARPRRKLVALATLLAGLILATGAV
                     LLIEAIDDRLSAPRDVVRTLRLPVLATFETDR"
     gene            complement(2564..3325)
                     /locus_tag="VHX39_30690"
     CDS             complement(2564..3325)
                     /locus_tag="VHX39_30690"
                     /inference="COORDINATES: protein motif:HMM:NF014606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015774 - polysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HEX3995562.1"
                     /translation="MHAVLNRPARRSFCPSWIWLLPATIGLAACSTAATSSMPAAPPA
                     PPFVMSKPAPPPPYRVQVGDILAVRLLLNPELNEEVTVRPDGRISTTVAHDELASGRT
                     VPELDDALNRDYIKQLQNPRVSVVVKSFAPARIYVGGEVANPGEFVNVGPALTVSQAL
                     TRAGGAKMSGDDDHVFIIRRGPDDQPEFLSVRYGDIVHGRNPMADVRLAPYDVVYVPR
                     TGVAEVYKFFNQYVQEFVPVSWGFSYSLGPGTSFH"
     gene            complement(3382..4863)
                     /locus_tag="VHX39_30695"
     CDS             complement(3382..4863)
                     /locus_tag="VHX39_30695"
                     /inference="COORDINATES: protein motif:HMM:TIGR03025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide biosynthesis polyprenyl
                     glycosylphosphotransferase"
                     /protein_id="HEX3995563.1"
                     /translation="MVPTRRIEHTAAVLPGTIMQRGRLWAFSAMRAHGRPVMLLGADL
                     VAFVAAVSLAFSLTAATAPSPYFRAWDNLSSLGTAWHGWGSLLVLACVLCYFGSRGHY
                     TARVPSFTVSGDVAIAIVVAFACDAFLTLAIYDRPLQLEGLLRWALVCPCLLLARWLA
                     REALRSAGLWSLDTLVVANPGDLAAAIAALRSDPALGYKVAGTMRPAAAAALRDHELV
                     RMVAERGFDFVVAAVGSDRPDQESAVIRALHRGGVSIGLVPVLPELPVAGFRRHYFVG
                     HDLALLVGKNNLTVPFNRILKTAFDLIAAALLSVMLAPLLIGMALLVRADGGPIFYRQ
                     SRVGTGGRAFSCLKFRTMVVDADRQLKSVLRADPRAAAEWAADQKLADDPRITKVGMF
                     LRRSSLDELPQLFNVLRGEMSLVGPRPIVAGEVARYGRNIEYYYETKPGLTGLWQVSG
                     RNDTGYARRVKLDVWYVRNWSLGHDIAILCKTVPAVFLRRGAH"
     gene            complement(5025..6032)
                     /locus_tag="VHX39_30700"
     CDS             complement(5025..6032)
                     /locus_tag="VHX39_30700"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3995564.1"
                     /translation="MPADTCLVTIVIPVFNSAATVTRAAASALCQDMASLELLIVDDG
                     SNDDSLAEASRIADSDPRVRVIAVRHNRGKPHAMNRAIAQARGRWIAVLDADDCYAND
                     RLATLIAAAEQNGADLVADNQFLHDAGAGQTVGTAFPIRRRDAALTRRKFIAGCDPFA
                     AFNYGMLKPIIRTEFIRRTGLRYRENARLSEDFLYLVEFFAAGGQAWLVSQPLYCWTQ
                     AFGSVSRQWTNTGASAWRYDFLAARAANEDVRRAMRPAVHGDLIALLNRRETALRQLH
                     WFRELCRSRDTGHGLRELLPMILRQPSMWPFVLRRALHAGWRRATVSRVAHVKVDTTV
                     T"
     gene            complement(6231..7067)
                     /locus_tag="VHX39_30705"
     CDS             complement(6231..7067)
                     /locus_tag="VHX39_30705"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEX3995565.1"
                     /translation="MQISSAASPPVVIGPYRSRGIVSAGFLASVLLLTLSALVAANRQ
                     HEWEFPLVRAINSFARHSMLLDRTMHALTTRDLLQGVPFVGLIWFLWFASDATGPRAR
                     LLVGTVAAAFAGVLSRVIQLGLPTHLRPLHQPLLGFVLPFGVDPDTLNHFNSFPSDHG
                     AVFFTLCAVIWRERPQLGMAAFVWAVIIDFARVYEGYHFPSDVIGSIALGLVVLYLFR
                     AVNAERPLSRVLTFAQQRAAWFYLATFVVTYQIATLFDDLREIGRGFSAVLLHHDVFN
                     GS"
BASE COUNT         1491 a         2305 c         2431 g         1357 t
ORIGIN      
        1 gctcgtgctg tcgcgtgaaa ttccagtaca gattgcgcgg aaagaatcga atgaccttga
       61 cgccgttgcg cgtttcgacc gggtacggct ccatctccgg gctgcaggtc gatacgacgg
      121 tgacctgatg gccgcgctcg acgaggcctt cgcacagatc ggcgaccacc agttcggcgc
      181 cgcccgccat gatcggcggg tagatgttgt tgaccatcac gatgtgcatg cgcgttgcct
      241 ggctacagcc aacgatgcag ccaccgcggc gcatggcggc ggcatttggt cagcaccacg
      301 ccaaccacac tgccgcccga agcacgcaac gcgtcgcgca attttgccgc caccggccct
      361 cgggtgcgac cggattccag caccagcacg ttgccgtcga catagggcgc cagtagtact
      421 cccatcggtg cctccgcagc cgacggcgag gcaatgatga caaggtcaaa cgtttgccgc
      481 agccgatcca tgaactcggg aatgcggcgc aacaccggcg cgaggtcgag ggcgccgcgc
      541 atggtcggga aactcatttg gtacagttcc agaccgacca cgcggctgat cgaggcttcc
      601 agatcggtcg gatcgaacga agccgagaag accggttcga ggcgggaagg cagcaacgta
      661 tcgatggcat cggtgcgcat tccggtgccg tcaacgaaca gcacgcgctt atccagccag
      721 gatgcgctga tgtaggcgag gtcgtaggcc acatgggtga tcgaaacatc cggctcaggc
      781 gcgaccagtt gtgtcacgac gccggtaccg gcaggcagcg cgtcggtcaa agcgtgatgc
      841 aatttgacca gttctccggt cgccagcccg tgcggccgca gaccggcact gagacgcggc
      901 tgcgaccggt gctgccgtgc gggcgattgc atccctggtc tcacgcggtc cgccattatg
      961 gtgtccatac gtcgctgtct ccgtcaaagt catttgtcgt caatggattg ggcctcataa
     1021 tggatcacgg ccggcgcacc ggtcggtttc gcccggcgca ccggtcggtt tcgcccggct
     1081 caccggtcgg tttcgaatgt cgcgagtacc ggtagacgca aagtgcgaac cacatcgcgt
     1141 ggtgccgaaa gccggtcgtc gatcgcctcg atcaggagga cggcgccggt cgccaggatc
     1201 aggcctgcca gcaaggtggc cagcgccacc agtttgcgcc gcgggcgggc gggacgattg
     1261 ggggtcgagg ggaccgcgat caccgccgcg gccgaaatgt tctgtgcgtt gcggttggct
     1321 tccactttcg ccgtctcata gcgaatggcc agagcacgat aggtgtcgtt ctggatttgc
     1381 accgtcctca ccatgtcgtc gtattgattg cgttctgcct ccaatgccga caattgcttg
     1441 ttgatccctt gcagttggtc ggccaggacc tgctcgggct ggcgtgcgct ggtggcttcg
     1501 gcggaagcac gcaaatagtc ggtatcgatg ttctgatgca cgacgttggg cgtattcgca
     1561 gcacggttct tggcttccga cgtgcgttgg ttcgcgatct tcctcagtga agcgatctgc
     1621 gcatccattt gctgaaacac gggactgtcc ggctggtaag tactggccat ctgactacgt
     1681 ttcgtcagca actcgtcaag ctgcgtctcg gcggcatcca ccgcgtggta ttgttcgccg
     1741 gcggccgacg aggacacctc cgagggcacg tttttcagca attcttcgag tgcggcctgg
     1801 cgctgttgcg cttccaccac tctggcgtgc gcgatgttga gacgggtctc cacgtcggtc
     1861 cgttgcgtga gcaattgcat gacctgttgt tgcagatcgg ctatcttgtt gttcgcctta
     1921 aaggccgcca gggcgttctg cgcttcggtc agtttatcgc gcgccttggt ggcctcatcg
     1981 tcactgaaat gcaattgcgg attggcatag accgcggctt cctgtgcgta gaactgtttg
     2041 agcaattgct gcacgacgtc atgcgcgacc tgagcatccg ggttgagata ggtgacgctg
     2101 atcacatcgc tttgcaggcc gacgtcaatg accaaattgc tggaaaattg ctgttccgcc
     2161 tcatccattt tgtgtgtctc gggcacgtca gatgccgcaa ttttcggata cagtctggcc
     2221 aggcccacgg cgttgatggt gcccaccagc acgtcgcggg cgtgcagcat gtcggcatcg
     2281 gaataaatga tctcacgtcg ttcattggag ccgggcggct gtgtgggatc gcggctgcga
     2341 tcgatgtccg gcaccgactg cggcgtatca aatcgcacga ccagagacgc agtggattgg
     2401 tacagcgtct gggctagcgc cagatacgcc gcacccacgc cacagacgag acaaagcacc
     2461 actgcgaaca acagtttacg tcggagaaat gcgacgacgg tggcgcgcag atcgggttgt
     2521 gcgatcatct ttggatttcc gatcgaggca attctatcga catctaatga aaggacgttc
     2581 ctgggcccag tgagtaggag aaaccccagc tgacggggac gaactcctgg acgtattgat
     2641 tgaagaattt gtacacctcg gccacgccgg tgcgcggcac gtagaccacg tcgtatggcg
     2701 ccagccggac atcggccatc gggttgcggc catggacgat gtcgccataa cgcaccgaca
     2761 ggaattcggg ctggtcatcc ggcccgcggc ggatgatgaa cacgtgatcg tcgtcgccgc
     2821 tcattttggc cccgccggcc cgggtcagcg cctgcgacac cgtcagcgcc ggtccgacgt
     2881 tgacgaattc gcccgggttg gcgacttcgc cgccgacata gatgcgggct ggcgcgaacg
     2941 atttcaccac caccgaaacg cgcggatttt gcagctgctt gatataatcg cgattgagcg
     3001 cgtcatccag ttccggcacc gtgcggccgg atgccagttc gtcatgagca acggtggtgg
     3061 aaatcctgcc gtcgggacgc accgtcactt cctcgttgag ttccgggttc aacagcagtc
     3121 tgaccgccag gatgtcaccg acctgaacgc gatagggcgg tggcggggca ggcttgctca
     3181 tgacaaatgg tggcgccggc ggcgcggccg gcatcgatga tgtggctgcg gtgctgcagg
     3241 cggccagtcc gatcgttgcc ggcaacagcc aaatccagct tgggcagaac gatcggcgag
     3301 ccggccgatt taacaccgcg tgcatgacgt gctggcctcc ggaaattgga caacgatctg
     3361 atgctggcat tgcggctgcc gctaatgcgc gccgcggcgc aggaatacgg cgggaaccgt
     3421 cttgcacaag atcgcaatgt cgtggcccag agaccagttc ctgacgtacc aaacgtcgag
     3481 tttcacgcgg cgcgcatagc cggtgtcatt ccggccgctg acctgccaaa gcccggtgag
     3541 acccggcttc gtttcgtagt agtattcgat attccggccg tagcgcgcca cttcccctgc
     3601 cacgatcggg cgcggtccaa cgaggctcat ctcgccgcgc agcacgttga acagctgggg
     3661 caactcgtcc aggctggacc gtcgcaggaa catcccgact ttggtgatcc gcgggtcgtc
     3721 ggccagcttc tggtcggccg cccattcggc cgcagcgcgc ggatcggcac gcagtacgct
     3781 cttcagttgc cgatcggcat cgaccaccat ggtgcggaac ttcagacaag agaacgcccg
     3841 cccgcccgtg ccgacgcgtg attggcgata aaatatcggg ccgccgtcgg cacgcaccag
     3901 caatgccatc ccgatcagca atggcgccaa catcacactc agcagcgcag cggcgatcag
     3961 gtcgaacgca gtcttcagga tgcggttgaa cggcaccgtc agattattct tgccgaccag
     4021 cagcgcgagg tcgtggccaa cgaaatagtg ccggcgaaaa cccgccaccg gcaattccgg
     4081 caacaccggc acgaggccga tcgaaacgcc gccgcgatgc agtgcgcgga tcaccgcgct
     4141 ttcctggtcg ggccgatcgg agcccacggc agccacgaca aagtcgaagc cgcgctcggc
     4201 aaccatgcgc accaactcgt gatcgcgcaa cgccgcggcg gcggcgggcc gcatcgtacc
     4261 ggcgaccttg taacccagtg ccgggtcgga gcgcagcgct gcgatggcgg cggcgaggtc
     4321 gcctggattg gccaccacca gcgtgtcgag cgaccataag ccggcagagc gcaacgcctc
     4381 gcgagccagc cagcgtgcca gcagcaggca cggacagacc aaggcccaac gcaacaggcc
     4441 ctcgagctgc aacggacggt cgtaaatcgc cagcgtcagg aacgcatcgc aggcaaaggc
     4501 gacgacaatg gcgatcgcca cgtcgccgct gacggtaaat gaaggaacgc gggcggtgta
     4561 atggcctctg ctgccgaaat agcagagcac gcacgccagc acgagcaacg atccccagcc
     4621 atgccaggcc gtgccgagcg aactcaggtt gtcccaggca cggaaatagg gcgatggcgc
     4681 ggtggcggcg gtcaacgaaa acgccaatga cacggccgcc acaaaggcca ccaaatccgc
     4741 tccaagcaac atcactggcc ggccatgagc gcgcatggcg gaaaatgccc acaggcgtcc
     4801 tcgctgcatg atggtaccgg gtagcacggc tgccgtgtgc tcgatccgcc gggttgggac
     4861 cacgatgtgc tccttgctgc gcgggatgag tcgctgaccg ggcagcgcga tggcccggtc
     4921 ggggtgagaa ggagcaaccg gcatgccaag ccgcacccgc agggttgatt tcagccggaa
     4981 cagctctcct gggcgggatc gcgccggcca tgacacgccg cggtttacgt tacagtggtg
     5041 tcaaccttga cgtgggcaac tctgctaacg gtggcgcgtc gccagccggc atgcagggcg
     5101 cggcgcagca cgaagggcca catcgacggt tgccgcaaaa tcatcggcag caattcacgc
     5161 agtccgtgac cggtatcgcg tgaacggcag agctcacgga accaatgcag ttggcgtaac
     5221 gcggtctcac gccggttgag caacgcgatc agatcgccat gcacggccgg tcgcattgca
     5281 cggcgaacat cttcgttggc agcgcgtgcg gcgagaaagt cgtaccgcca tgcgctggcg
     5341 ccggtattgg tccattggcg cgacacgctg ccgaacgcct gggtccaaca atacagtggc
     5401 tgggatacca gccaggcctg ccctcccgcg gcgaaaaact cgacgaggta aagaaaatcc
     5461 tctgacagcc tggcgttttc acgataccgc aatccggtcc ggcgaatgaa ctcggtgcga
     5521 atgatcggct tcagcatgcc gtagttgaaa gcggcgaacg gatcgcagcc ggcgatgaat
     5581 ttccgtctgg tcaatgccgc atcgcgccgc cttatgggga acgccgtgcc aacggtctga
     5641 ccggcaccgg cgtcatgcag gaattgattg tcggccacca gatcggcgcc attttgttcc
     5701 gcagcagcaa tcagtgtggc cagccgatcg ttggcgtagc aatcatcggc atcgagcacg
     5761 gcaatccagc ggccgcgggc ctgcgcgatc gctcggttca ttgcgtgggg tttgccgcga
     5821 ttgtgccgga cggcgatgac ccgcacccga gggtcggagt cggcgatccg cgacgcttct
     5881 gcaagcgagt cgtcgtttga gccgtcgtcg acaatcagca gctccagcga cgccatgtcc
     5941 tggcacagtg ccgatgcggc agcgcgcgtc acagtggcgg cactgttgaa gaccggaatg
     6001 acgatggtga cgagacacgt gtcggccggc attggacgcc tccagatgcg caaccggccg
     6061 gcgcgggaaa cgcggcagga tggcgtcatg ccatccgggt tgccgaattt tagaggcaac
     6121 caacgtgcca tgaggcagct ttggccggcc ggtactgggc tacgccggtt tatgcacagc
     6181 cgcgacgtaa tggtttacgt cacgcggcgt tacgttgcac gggtcggcga tcacgagcca
     6241 ttgaacacgt catgatgcaa caacacggcc gagaaaccac gaccgatttc gcgcaggtca
     6301 tcgaacaggg tggcgatttg ataggtcacc acaaatgtcg ccaaatagaa ccaggcagcg
     6361 cgttgttgtg cgaatgtcag gacccgggat agcggccgct cggcgttcac ggcccggaat
     6421 aggtaaagta ctaccaggcc cagtgcgatg gagccgatga cgtcggaggg gaagtgatag
     6481 ccttcgtaga ctctcgcgaa gtcgatgatg acagcccaga cgaacgcggc catcccgagc
     6541 tgcggacgtt ctcgccagat gacggcgcag agtgtgaaga acaccgcgcc atggtcgctg
     6601 ggaaacgaat tgaagtggtt gagcgtgtcg gggtccacgc cgaacggcag cacgaagcca
     6661 agcagtggtt gatgcaacgg ccgcagatgg gtcggcagcc ccagctggat gacgcggctt
     6721 agcacgccgg cgaaggcagc ggcgacggtg ccgaccagca gcctggcgcg cggcccggtc
     6781 gcgtcgctgg caaaccagag gaaccagatg aggccaacaa acggcacgcc ttgcaacaga
     6841 tcgcgcgtcg ttagcgcgtg catggtgcga tccaacagca tcgagtggcg agcgaaactg
     6901 ttgatcgcgc ggaccagggg aaattcccac tcatgttgcc ggttggcggc gaccagcgcg
     6961 ctcaatgtga gcaataggac agacgcgagg aaaccggctg agacgatgcc tcgcgatcgg
     7021 tatggcccaa tcacgaccgg tgggctggcc gcactcgaaa tctgcaattt ctcctccctt
     7081 aacttcggac ttctggttgg ggtcggccga acggttagtg ggcgccgcaa caatctgatt
     7141 cggcgcggac aggttcgcgg gcaaagcgag atcctgcgac gccgaaggcc gcggcacgtg
     7201 gattggcaac gctgatgcgg gacggttggt cgataaatct cccttgtccg acagcatgat
     7261 ttgctggtcc tgatcgatag tgcatatgct gtgccaggtt ggacatcgca tcgtggcggc
     7321 ggaggctcgt tacgtcggga tagggcgccc ggcgcagtca gggtcctcac tttcaatgcg
     7381 ttgagcttac cgcccgccgc actcgcctcc gatcccaggc agccaacaat tcagcctaca
     7441 aagccgacgc ggattttgac ggtgaagacc ggacgggcgc ggactgggtt tccgtcatct
     7501 gcccagaaat aggccggtct gccggacata ggtctccaca ttcgcacgat cgtgctcgaa
     7561 gccgaactcc ggcgtgtgaa tgcc
//
LOCUS       DATAVD010001605         2361 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_337100, whole genome shotgun sequence.
ACCESSION   DATAVD010001605 DATAVD010000000
VERSION     DATAVD010001605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2361
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_337100"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..875)
                     /locus_tag="VHX39_30710"
     CDS             complement(<1..875)
                     /locus_tag="VHX39_30710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995566.1"
                     /translation="MPQSVVHRIGHLIAAAAVLLMLPSLAWAVPNYAVQTGQPCTTCH
                     IGAYGPQLTAFGRAFKIGGYTQTGGDGGNSVPISVMLQSSYSDTTKGQGGPASNNYGA
                     NGNFAMDQISVFTGGRITDYLGAFVQGTFDGIASAFHLDNTDIRLTTPLTVGDTELRV
                     GLDVNNGPTVQDPFNSTYAWGYPYVSSALVPTPSAQPILAGALNGSSLGATVYAWYDR
                     SLYLEAGVYNTFGPSLLSYTGNGYGPGATAAPAPYARAAYEWNWNGQSAHIGGIFLHS
                     SINPTVSTFASNDLNG"
     gene            complement(946..1326)
                     /locus_tag="VHX39_30715"
     CDS             complement(946..1326)
                     /locus_tag="VHX39_30715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX3995567.1"
                     /translation="MKSTHLLLTLLVATAAGGAAGTARAADAAAGQAVFRSQCSICHS
                     VQPGRNMIGPSLAGIVGRKAGQQPDFHYSAANKGSGITWDEATLDRYLTSPQAVVPHT
                     IMTYGGLKDATKRANLIAYLATVH"
     gene            1686..>2361
                     /gene="groEL"
                     /locus_tag="VHX39_30720"
     CDS             1686..>2361
                     /gene="groEL"
                     /locus_tag="VHX39_30720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEX3995568.1"
                     /translation="MPAKDVRFGGDARQRMTRGVDTLAEAVKVTLGPKGRNVLLDKSY
                     GSPRITKDGVSVAKEIELSDKFENMGAQLVREVASKTNDQAGDGTTTAIVLAQAIVRE
                     GSKAVSAGMNPMDLKRGVDKAVAALVEELKKRSKKITTQAETAQVGTISSNGETDIGK
                     MIAEAMQKVGKEGVITVEESKTAETTLDVVEGMQFDRGYLSPYFVTNPEKMEAAIDSP
                     YILIYDK"
BASE COUNT          461 a          716 c          753 g          431 t
ORIGIN      
        1 ccgttcaagt cgttgctggc gaacgtcgaa accgtcggat tgatgctgga gtgcaggaag
       61 atcccgccga tatgagcgga ttgcccgttc cagttccatt catacgccgc acgcgcatag
      121 ggtgcggggg ccgccgtggc gcctggacca tagccgttgc cggtgtagct cagcaggctt
      181 gggccgaagg tattgtaaac cccggcttca aggtaaaggg agcggtcgta ccaggcatac
      241 acggttgccc cgagcgaact gccgttgagg gcacctgcca ggatcggctg cgccgagggg
      301 gtcggcacca gggcggacga aacataggga tagccccagg catacgtcga gttgaacgga
      361 tcctgcaccg tcgggccgtt gttgacgtcc aatccgacac gcagttcggt gtcgccaacg
      421 gtcaacggcg tggtcaggcg gatatcggtg ttatcgagat ggaatgcgct ggcgatgccg
      481 tcgaacgtgc cctggacgaa cgccccgagg taatcggtga tccggccgcc ggtgaatacg
      541 ctgatctggt ccatggcgaa attgccgttg gcgccataat tgttcgaggc gggaccgccc
      601 tgccccttgg ttgtgtcgct gtatgagctc tgcaacatca cggatatggg gacggaattg
      661 ccgccgtcgc cgccggtctg ggtataacca ccgatcttga acgcccgccc gaatgccgtc
      721 agttgcggcc cgtatgcgcc gatatggcag gtggtgcagg gctgcccggt ttgcaccgcg
      781 taattcggca cggcccacgc caacgatgga agcatcagca gaaccgccgc cgccgcgata
      841 agatgaccga ttcggtgtac gactgattgc ggcatttcgc ttccctccaa agcgggtagt
      901 ggaacgtcct ccaccgcccc agtccgccgg tccggtgtca gaccctcaat gcaccgtggc
      961 cagataggcg atcaggttcg cccgcttggt ggcgtccttc aggccgccat aggtcatgat
     1021 cgtgtgcggt acgacggcct gcgggctggt cagatagcga tcgagcgtcg cctcatccca
     1081 ggtgatcccg gatcccttgt tggcggccga atagtgaaaa tccggctgct gccccgcttt
     1141 ccggccgacg attccggcca ggcttggccc gatcatgttg cggccgggct gaaccgaatg
     1201 gcagatgctg cattgcgacc tgaagaccgc ctgcccggct gcggcgtccg cggcgcgagc
     1261 ggtgccggcg gccccgccgg cggcggtcgc gaccaacagt gtcagcagca ggtgagtgct
     1321 tttcatggat gcgccttgtt cattgccggg ttgttggctc ccggacgcct cggcagccat
     1381 tacgacctta aaatccaatt catgtttgat cgggatcaaa tcccagccgg ataattgccg
     1441 gcatgtcggg gagcgccctc ggcgtgggac catctggacg ctgacgcttt acccctggca
     1501 ctctcatggg aagagtgcta acaccccctg accggcgaaa catattttgt cgcggcggcc
     1561 gctaccaacc gcctgcatgc cacttcgggg tgcccgttgg ggggcaggct gcgacgaata
     1621 caatcggcac cggccgttgt cggtgccggc cggcgacgca ttcgattttc gggaaggata
     1681 tagaaatgcc tgccaaggac gttcggttcg gtggcgatgc ccgccagcgc atgacgcgcg
     1741 gtgtggatac tctcgccgaa gcggtgaaag tcacgctggg tcccaaggga cgcaacgtgc
     1801 tgctcgataa aagctacggt tccccgcgca tcaccaagga cggtgtgtcg gttgccaagg
     1861 aaatcgagct ttccgacaag ttcgagaaca tgggcgccca gctggtgcgc gaagtggcct
     1921 cgaagaccaa cgatcaggcc ggtgacggca ccaccacggc catcgtgctg gcgcaggcga
     1981 tcgtccgtga ggggtccaag gcggtgtccg ccggcatgaa cccgatggac ctgaagcgtg
     2041 gcgtcgacaa ggcggtcgcc gccctggtcg aggagctgaa aaagcgctcc aagaagatca
     2101 ccacccaggc ggaaaccgcc caggtcggca cgatctcctc caacggcgaa accgatatcg
     2161 gcaagatgat cgccgaagcc atgcagaagg tcggcaaaga aggcgtgatc acggtcgaag
     2221 aatccaagac cgctgaaacc accctcgacg tcgtcgaagg catgcaattc gatcgcggct
     2281 atctctctcc ttacttcgtc acgaatccag agaagatgga agccgccatc gacagccctt
     2341 acatcctgat ctacgacaag a
//
LOCUS       DATAVD010001606         9973 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1825883, whole genome shotgun sequence.
ACCESSION   DATAVD010001606 DATAVD010000000
VERSION     DATAVD010001606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9973
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1825883"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1258
                     /locus_tag="VHX39_30725"
     CDS             <1..1258
                     /locus_tag="VHX39_30725"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF012946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3995569.1"
                     /translation="ETANRWRVRTENGEVFTAKFLITAVGCLSTANVPKFEGLESFAG
                     DWYHTGQWPHEGVDFTGKRVGMIGTGSTGIQAAPVIAATAKHLTVFQRTANYSVPARN
                     APLTPEFQRYIKQSPDEIRAVTRETLNGMAFRIEERLAVETPPEEREAIYEAAWERGG
                     LQFRAAFKDMMVDKAANDTAADFVKRKIRSIVKDPQTAAILSDIDHPYAAKRPPIDTN
                     YFETYNRPNVALVDVKAAPIQRITPTGVATTEAEYKLDIIVFATGFDAMTGPMLRMNI
                     RGRDGVALQDVWDAGPRNYLGLQIAGFPNLFTITGPGSPSVLCNMPVAIEQHADWITD
                     CIAHMRANGLERIEATPDAVDKWVTEVNDLAGKTLLPLAKHSWYLGANIPGKPRVFMP
                     YAGGMVRYREICNDVVARGYEGFSLA"
     gene            complement(1265..2080)
                     /locus_tag="VHX39_30730"
     CDS             complement(1265..2080)
                     /locus_tag="VHX39_30730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014242425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3995570.1"
                     /translation="MRLRDKVAVIIGAGQSAGETMGNGRATVLRFAQEGARIFAVDRD
                     LSSADETAMLARAEGAECETARADVVHEAELRAAIEAAHTRFGRIDILHYNVGISVAG
                     GDAPVTEITEDAFDLISAVNLRGAVMACKHVLPIMRAQKSGVILMISSISAWENYPNV
                     AYKVTKAGMIAFTQQLAIRNAEYGIRANAILPGLMATPMAVDVRSRTINKPRDEIMQE
                     RDARVPLRGRQGTAWDVANAALFLASDEANFITGVSLPVDGGMLVDIAPGRRN"
     gene            complement(2100..3281)
                     /locus_tag="VHX39_30735"
     CDS             complement(2100..3281)
                     /locus_tag="VHX39_30735"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3995571.1"
                     /translation="MKILDAQHDLAAFRQAIRDWLAEVVPPDWKARMVRATNEEFIAF
                     QRWWMAERSKAGLAIPHWPAEYGGAGLTLRHLIVIADEMARADAPQARMFTISLIHLP
                     GTLFPHGTEAQKRRYLAGVAKGDVWCQGFSEPNSGSDLASLRTRAVRDGDHYVINGQK
                     IWSSYSMYADHCILLTRTDPDAQKHRGITYFIMDMRSPGVEVRPIRQANGRSEFGEMF
                     LTNVRIPAENMIGRENNGWRVAQATLASERGVIAFEGAERQRYEVEAFYRQALESDAA
                     WLHDDQLRREFMGFLAEMQAGRRLLRRVLEESETPEASASVLPSIVKLSATVLRQRIC
                     SFMTRIAGVEGQQFAMLAEEPFGSPMFDFLSAFSGTIAGGTNEIQRNIVAERGLGMPR
                     L"
     gene            complement(3278..4384)
                     /locus_tag="VHX39_30740"
     CDS             complement(3278..4384)
                     /locus_tag="VHX39_30740"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3995572.1"
                     /translation="MTMIEAAGSLDQETRDALREGVAGVLAEQSGSTAVHAFIDGKIA
                     LDRELWSRAGSLGWFGFGIPEQYGGLGLGWHGLAILHTELGRQAAPGPYIPTLSAAQA
                     IVETGSEAVRTAWLPRIASGEISAAVPANLGVAPLAWSGAGVSGTLRCLGAPNAMFVL
                     APAGDAWVIVELAGADVNVTPMWDLTRQVIDIRLHDAKPAAILDDREGTGRVLLQAMA
                     LAAAADSCGGARSVTERTIAYMKTREQFGQPIAGFQALKHRAADLATKLAVMDEMVAH
                     AVHRTAANEPDADIWVSLAKAEATEGFVFIATDCVQLHGGVGFTWDYDPQIFLKRARL
                     NEVLVMANPALRDRAAAGLAAATRAGQSALELGL"
     gene            complement(4409..5227)
                     /locus_tag="VHX39_30745"
     CDS             complement(4409..5227)
                     /locus_tag="VHX39_30745"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3995573.1"
                     /translation="MDLGLQGKHAIVTGGSRGIGKAIARELAREGVDVAIVARNKADL
                     EATARELAAETNRRILPLVADVTSKEQVDRMVAEAAQQLGGLHILVNSGSAPGGSASA
                     IGPIENVIDEDLLEDFNVKYVGALRCSRAVIPFMKKEGWGRIINISGANARNAGNLSG
                     GARNASLVHLTKTLAVQMGRHGITVNCIHPGTTRTERTPSLLAARASQLGVSPDEAER
                     QDFAPDSPRGNAICRMVDASEVAFVTVFLASEKAWAVSGELVAATGGAGRTVHY"
     gene            5366..6388
                     /locus_tag="VHX39_30750"
     CDS             5366..6388
                     /locus_tag="VHX39_30750"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3995574.1"
                     /translation="MKKIGFLSFGHWTSSPQSQAQSASDVLLQSIDLAVAAEELGADG
                     AFFRVHHFARQLASPFPLLAAVGARTRRIEIGTAVIDMRYENPLYMAEDASAADLIAG
                     GRLQLGISRGSPEQVIDGWRYFGYRPAEGETDADMGRRHAEVFYDVLRGQGFAKPSPR
                     PMFQNPPGLLRLEPYSEGLRDRIWWGSGSNATAVWAGTLGMNLQASTLKNDETGEPFH
                     VQQAAQIRAFRAAWKEAGHPREPRVSVTRSIFALVDDRDRAYFGHSGDDQDSIGFIHE
                     STQSIFGRTYAAEPDILIKQLKQDEAIAEADTLLLAVPNQLGVAYNAHIIETILTVVA
                     PALGWR"
     gene            6615..7976
                     /locus_tag="VHX39_30755"
     CDS             6615..7976
                     /locus_tag="VHX39_30755"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3995575.1"
                     /translation="MTKHMHLNLFIHGRGHHEAAWRHPDASPLPLTDIRYYTDIARKA
                     EAGLFDSIFLADSLGVGEDVANAPRTWLEPVTTLAALAGATRRIGLIATCSTTYTEPF
                     NLARQFASIDHMSGGRVGWNIVTTWLATASGNYGGQGPLSHAERYQRAEEYMRVVTGL
                     WDSWSDDAVLDDRTNGHYARVDGLRMLNHAGQYYQVAGPLNMPRGPQGRPVFVQAGSS
                     ETGRRFAARHAEAVFTAQMEKATARDFYADLKRLVAEEGREPQQVLILPGLSPVIGST
                     EAEAQRIARELNDLSDPEVGRKRLSGRFGGHDFSHLPLDRTLSPEDFPDPGKVEAARS
                     RAEVIVGLVRREKPTLRQLLGYMAGARGHFVTAGSPEQIADLMEDWFRDGAADGFNLM
                     PPVLPAMLEVFIAEVVPLLQRRGLFRTQYAGDTLRALYGLPRPDVRFQAGADERLKDS
                     AST"
     gene            complement(8197..9078)
                     /locus_tag="VHX39_30760"
                     /pseudo
     CDS             complement(8197..9078)
                     /locus_tag="VHX39_30760"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
     gene            9145..9219
                     /locus_tag="VHX39_30765"
     tRNA            9145..9219
                     /locus_tag="VHX39_30765"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9177..9179,aa:Gly,seq:gcc)
     gene            9600..9845
                     /locus_tag="VHX39_30770"
                     /pseudo
     CDS             9600..9845
                     /locus_tag="VHX39_30770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612363.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
BASE COUNT         1836 a         3225 c         3086 g         1826 t
ORIGIN      
        1 cgagactgcc aatcgctggc gtgttcggac cgagaacggc gaggtattca ccgcaaagtt
       61 cctgatcacc gcggtcggct gcctgtccac cgcgaatgtc ccgaaattcg agggattgga
      121 gagtttcgcc ggcgattggt accataccgg tcaatggccg cacgaaggcg tcgacttcac
      181 cggcaaacga gtgggcatga tcggcaccgg ctccaccggc atacaggccg caccggtgat
      241 tgcggcaacc gcgaagcatc tgacggtgtt tcagcgcacg gcgaattatt cggtgccggc
      301 acggaatgcc ccgctgactc cggaattcca gcgctacatc aagcaaagcc cagatgagat
      361 cagggcggtg acgcgcgaaa cgctgaacgg tatggcgttt cggatcgaag agcgcctggc
      421 tgtcgagacc ccgccggagg agcgcgaggc gatttacgag gccgcatggg aaagaggcgg
      481 attgcaattc cgcgcggcgt tcaaggacat gatggtcgat aaggcggcga acgacaccgc
      541 cgcggatttc gtcaagcgca agatccgctc tatcgtgaag gacccgcaga ccgcggcgat
      601 cctgtcggat atcgatcatc cgtacgcggc gaaacgacca ccgatcgaca ccaactactt
      661 cgaaacatac aaccggccaa acgttgcgtt agtcgatgtg aaggcggcac cgatccagcg
      721 gatcacgcca acgggcgttg ccaccacgga agcggagtac aagctggata tcatcgtttt
      781 tgccaccggc ttcgatgcca tgaccggccc gatgctgcgg atgaacattc gcggccgcga
      841 tggcgtcgcg ctgcaggacg tgtgggacgc gggtccgcgc aactacctcg gcctgcagat
      901 cgcgggcttt cccaacctgt tcaccatcac cggcccgggc agcccatcgg tgctgtgcaa
      961 catgccggtg gcgatcgagc agcatgcgga ttggatcacc gattgcatcg cccatatgcg
     1021 cgccaacggc ctggaacgga tcgaagccac gcccgacgcg gtcgataaat gggtgacgga
     1081 ggtcaacgac ctcgccggga agacgctgct gccgctggcg aagcattcct ggtatctggg
     1141 cgccaacatc cccggcaagc ccagggtgtt catgccgtac gccggcggca tggtacgata
     1201 ccgggagatt tgcaacgacg tcgtggcgcg cggctacgaa gggttcagcc tggcgtaacg
     1261 atcgtcagtt gcgccggccg ggggcgatat ccaccagcat gccgccatcc accggcagtg
     1321 acacgccggt gatgaaattg gcttcatcgg acgccaggaa caacgccgcg ttggcgacgt
     1381 cccaggcggt gccctggcgc ccccgcagcg gcacgcgggc atcgcgttcc tgcatgatct
     1441 cgtcacgcgg cttgttgatg gtccgggaac gcacatcgac cgccatcggt gtcgccatca
     1501 ggcccggcag aatggcattc gctcgaattc cgtattcggc attgcggatc gccagttgct
     1561 gcgtaaaggc gatcatgccg gctttcgtta ccttgtacgc gacattcgga tagttctccc
     1621 acgcggaaat ggaggagatc atcaggatca cgccggattt ctgcgcgcgc atgatcggca
     1681 gcacgtgctt gcacgccatg accgcgccac gcagattcac ggcgctgata aggtcgaagg
     1741 catcctcggt gatctccgtc accggcgcgt cgccaccggc caccgagatg ccgacattgt
     1801 aatgcaggat gtcgatacgg ccaaagcgcg tatgcgccgc ttcgatggcg gccctcagtt
     1861 cggcctcatg caccacgtcg gcacgtgcgg tttcacattc ggcaccctcg gctcgggcga
     1921 gcatcgccgt ttcgtcagcg gaagaaagat cgcggtctac agcgaaaatc cgagcgccct
     1981 cctgggcaaa tcgcagcacg gtcgctcggc cgttgcccat tgtttcgcca gcgctttgtc
     2041 cggcaccgat gatgacggca actttatctc taaggcgcat gagtcttcct cattgattgc
     2101 tacagccgag gcatccccag gccgcgttcc gcaacgatgt tgcgctggat ttcattcgtc
     2161 ccgccggcga tggtgccgga aaacgcactc aggaaatcga acattgggct gccgaacggc
     2221 tcctccgcca gcatggcgaa ttgctggcct tcgacgcccg cgatccgcgt catgaaggaa
     2281 catatccgct gtcgaaggac cgtggccgac agcttgacga tcgacggcag cacactggcc
     2341 gaggcctcag gcgtttcact ctcttccagc acgcgccgca acagccggcg ccccgcctgc
     2401 atctccgcga ggaaacccat gaattcgcgg cggagttgat catcgtgcag ccaggccgca
     2461 tcgctttcca gcgcctggcg atagaacgct tcgacttcat aacgctgccg ttcggcaccc
     2521 tcgaaggcaa tcacaccacg ttcggaggca agggttgcct gcgcgacccg ccagccgttg
     2581 ttctcacgcc cgatcatatt ttcggcggga atgcgaacat tggtcaggaa catctcgccg
     2641 aattcggacc ggccgttggc ctggcgaatt gggcgcacct cgacgccggg tgagcgcata
     2701 tccatgatga aataggtaat gccgcgatgc ttttgcgcgt ccggatcggt cctggtcagc
     2761 aggatgcagt ggtcggcata catcgaatac gacgaccaga tcttctgccc attgatcacg
     2821 taatgatcgc catcgcggac agcccgggta cgcagcgatg caagatcgga accggaattc
     2881 ggttcggaga atccctggca ccagacatcg ccctttgcca caccggccag atagcggcgc
     2941 ttctgcgcct ccgtcccgtg cgggaacagc gtgccaggaa gatggatcag cgaaatggtg
     3001 aacatccgcg cctgcggtgc gtcagcccga gccatctcat cggcgatgac gatcagatgc
     3061 cgtaacgtca acccggcgcc gccgtactcg gccggccagt gcggaatggc gaggccggcc
     3121 ttgctccgct ccgccatcca ccagcgttgg aacgcgatga attcttcgtt ggtggcccga
     3181 accatgcggg ctttccaatc gggcggcacg acttcagcga gccagtcgcg gattgcctga
     3241 cggaaggcgg ccaggtcgtg ttgcgcgtcg aggattttca tagtcccaac tccaacgccg
     3301 actgcccggc acgtgtcgcg gcagccagtc cggcggcggc ccgatcgcgc agggcgggat
     3361 tcgccatgac aagcacttcg ttcaggcgtg cgcgcttgag aaatatctgc ggatcgtagt
     3421 cccaggtgaa accaacgccg ccgtgcaact gcacgcagtc ggtggcgatg aaaacaaagc
     3481 cctcggtcgc ctcggccttg gcgagcgaaa cccagatatc ggcgtccggc tcgttcgcgg
     3541 cagtccggtg gacggcatgg gccaccattt catccatcac cgccagtttc gtggcgaggt
     3601 cggcggcccg atgcttgagg gcctggaacc cggcgatcgg ctgcccgaac tgctcccgcg
     3661 ttttcatgta ggcgatggtt cgttcggtaa ccgaacgggc cccgccgcaa ctgtcggccg
     3721 ccgctgccag tgccatggct tgcagcagca ccctgccggt gccctcgcga tcgtccagga
     3781 tggcggcggg cttggcgtcg tggaggcgaa tatcgatcac ctgccgcgtc aggtcccaca
     3841 tcggcgttac gttcacgtcg gccccggcca gttcgacgat gacccaggca tcaccggcgg
     3901 gtgcgagaac gaacatggcg ttgggtgcgc ccaggcaccg caaagtgcct gacacgcccg
     3961 cgccggacca tgccagaggc gccactccca ggttggccgg gacggcggca ctgatctcac
     4021 cggaggcgat gcgcggcagc caagccgttc ggacggcttc cgacccggtt tcgacaatcg
     4081 cctgggccgc cgaaagcgtg ggaatgtatg gcccgggcgc ggcctgccgt ccgagttcgg
     4141 tatgcaggat ggcgaggccg tgccagccca gacccaaccc gccatactgc tccgggatgc
     4201 cgaagccgaa ccacccgagg gaaccggccc gggaccacaa ttcccgatcg agcgcaatct
     4261 tgccgtcgat gaatgcatgc accgcggtgc tgccgctttg ctcggccaac acaccagcga
     4321 caccttcgcg caaggcgtcg cgggtctcct ggtccagtga gcctgccgcc tcgatcattg
     4381 tcattcgacc tcctgctgct tgtctggctc agtaatgaac cgtccgcccg gctccgccgg
     4441 ttgccgcaac cagttcgccg gagaccgccc aggccttctc cgaagccagg aataccgtga
     4501 cgaatgcaac ctccgaagcg tccaccatgc ggcagatggc attgccacgc ggcgagtccg
     4561 gggcgaaatc ctgccgctcc gcctcatcag gagatacccc caactggctg gcacgggcgg
     4621 cgagcaggct aggcgtgcgc tcggtgcggg tcgtgccggg atggatgcaa ttgaccgtga
     4681 tcccatgccg ccccatttgc accgccaagg tcttcgtcag atgcaccagg gaggcgttgc
     4741 gagcgccgcc gctgagattg ccggcgttgc gggcgttggc accgctgata ttgatgatgc
     4801 gaccccagcc ctctttcttc atgaacggaa tgacagcacg ggaacagcgc agtgccccga
     4861 cgtatttcac gttgaagtcc tccagcaaat cctcgtcgat aacgttttcg atcgggccga
     4921 tcgcgctggc cgaaccgcct ggcgcggacc cgctgttcac cagaatgtgc aggccgccca
     4981 gttgctgggc agcctcggcg accatgcggt ccacctgctc cttgctggtg acatcggcaa
     5041 cgaggggaag gatgcgccgg ttcgtctcgg ccgccagttc ccgcgccgtc gcttccagat
     5101 cggccttgtt ccgcgccacg atcgccacat cgacgccttc gcgcgccagt tcccgcgcga
     5161 tggctttgcc gatgccgcgg cttccgcccg tcacgatcgc atgcttgcct tgcaatccga
     5221 ggtccatggc gttctctccc tttggcgtga ttttattggt tcgggggcat tgttctctct
     5281 gggggacccc ggcgcaagag ttggcactca ctcgcggcac ctatcctgct gacttggcct
     5341 cgaaacaacg ataggctgcg cccgcatgaa aaagatcggt ttcctctcct tcgggcattg
     5401 gacgtcctcg ccgcaatcgc aggcccagtc cgcgagcgac gtgctgctgc aatccatcga
     5461 cctggccgtc gcggccgagg aactgggcgc ggacggagca ttcttccgcg tccatcactt
     5521 tgcgcgccaa ctggcctcgc catttccgct gctcgcggcc gtgggcgcca ggaccaggcg
     5581 gatcgagatc ggcaccgcgg tcatcgacat gcgctacgag aacccgcttt acatggctga
     5641 ggatgcaagc gcggccgacc tgatcgccgg cgggcgtcta caactcggga tcagccgggg
     5701 ttcgcccgag caggtgatcg atggctggcg ctatttcggc tatcgtccgg cagagggaga
     5761 gaccgacgcc gatatggggc ggcgtcatgc cgaggtgttt tatgacgtgc tgcgcggcca
     5821 gggcttcgcg aagccaagcc cgcggccgat gttccagaat ccgcccggat tgttgcgcct
     5881 ggaaccttat tcggaggggt tacgcgaccg gatctggtgg ggatccgggt ccaacgcgac
     5941 agcggtttgg gcggggacgc ttggcatgaa tctgcaggcc tcgaccctca agaatgacga
     6001 aaccggggag ccctttcacg tccagcaggc cgcccagatc cgagcgttcc gtgccgcctg
     6061 gaaggaggcg ggccatccgc gtgagccgcg tgtctcggtc acccgcagta tcttcgccct
     6121 ggtcgacgat cgcgaccggg cctatttcgg acacagcggc gatgaccagg attcgatcgg
     6181 ctttatccac gaatcgaccc agtcgatctt cggacgtacc tatgcggccg aaccggacat
     6241 cctcatcaag cagctcaagc aggacgaagc cattgctgag gcagacacgc tgctgctggc
     6301 cgtcccgaac cagctcggcg tcgcctacaa cgcccacatc attgaaacga ttctgaccgt
     6361 cgtcgcgccc gccctgggtt ggcgctgaag tcagccgccg atatgatccg cgtcagcccg
     6421 gaaggctgcg cggctccccg gtgagggagc ctcccgcggc tggcatcctc cggaaacgcc
     6481 ggcaaagtcg cgcacgctca cgcggcgttg gtgatccaga ccgatcatgc gacagtgtaa
     6541 ccgaaggtgg cggcgatggc gccggctgaa agcagccggc cgcaacgaac ctggcgcccg
     6601 gggtgagcaa gaccatgacg aaacacatgc atctcaatct gttcatccac ggccgtggtc
     6661 accatgaggc cgcgtggcgg cacccggatg cctcgccgct gccgctgact gatatccgtt
     6721 actacaccga cattgcgcgc aaggccgaag ccggtttgtt cgattcgatc ttcctggctg
     6781 actcactcgg ggtcggcgaa gacgtagcga acgcaccgcg tacctggctg gaaccggtca
     6841 ccacgctggc ggcgctcgcc ggtgcgaccc gccggattgg cctgatcgcc acctgctcca
     6901 caacctatac cgaaccattc aatctcgctc ggcagttcgc ctcgatcgac cacatgtcgg
     6961 gcggacgggt tggctggaac atcgtcacca cgtggctggc gacggcctcc ggcaactacg
     7021 gcggccaggg tccgctcagc cacgccgaac gctaccagcg cgcggaagag tatatgcggg
     7081 tggtgaccgg gctgtgggac agttggtcgg acgacgccgt gctcgacgac cggaccaacg
     7141 ggcactacgc ccgcgtcgat ggcctgcgca tgctgaacca tgccggccaa tattatcaag
     7201 ttgccggccc gctcaacatg ccgcgaggcc cgcaaggcag gcctgtgttc gtgcaagccg
     7261 gctcgtcgga gaccggacgc cgctttgccg cccgccatgc cgaagcggtg ttcaccgcgc
     7321 agatggaaaa ggcgaccgct cgggatttct atgccgacct gaagcggctg gtggccgagg
     7381 aaggccgtga gccgcagcag gtcctgatat tgccaggcct gagcccggtg atcgggtcca
     7441 ccgaagccga ggcacagcgc atcgctcgcg aactgaatga tctcagcgat cccgaagtgg
     7501 gtcgcaaacg actgtccggg cggttcggcg gccatgattt ctcgcatctg ccgctggacc
     7561 ggacattgtc accggaagac ttccccgacc ccggcaaggt ggaagcggcg cgcagccgag
     7621 ccgaggtgat cgtcgggctg gtgcgtcgcg agaaaccgac gttgcggcaa ctgctggggt
     7681 acatggctgg cgcgcgcggc catttcgtca ccgcgggatc acccgaacag atcgccgatc
     7741 tgatggagga ctggttccgc gacggtgccg ccgatggttt caacctgatg ccaccggtgc
     7801 tgccggcgat gctggaggtg tttattgccg aggtggtgcc gctgctgcaa cggcgcggat
     7861 tgttccggac ccaatatgcc ggcgatacgt tgcgcgcact ttatggcttg ccacgcccgg
     7921 acgttcgttt ccaggccgga gcggatgaac ggttgaagga cagtgcgtct acttgagtgt
     7981 ttgtgtttgt cgcgtggtcg cagcactgat gcttgaacag aacgatgaat gaaccctttt
     8041 acgacctgcc gtcgtggatc gcagcatctg gaaattgttg gccgccagcg acgcgctggg
     8101 acagttctcc aggttgttgg ccacgttgcc gggcggcaag catccgcaat ccgaacacgc
     8161 gagtgaagca gagccggttt agatgctgta cgacatctat cgaagggcga aaggattggg
     8221 cggtacgccc tgggccgttg aaatccatac actcttggtt tcgagatatt cccggattgc
     8281 ttcgatcccg ctctcgcggc cgagcccaga ccgtttcatt ccaccgaacg gcatcatgta
     8341 gctgaccgcc ctgtaggtat tgacccaaac ggttccggct ttgagtgctg ccgacattcg
     8401 gacagccctg cctatgtcgg ttgtccagac gccggcagcc agaccataga ttgtatcgtt
     8461 cgcaagctgg atcgcctcgg cctcgtcttc gaatccaaga atggacagaa cgggcccgaa
     8521 gacctcttct cgggcgatac gcatttcggg cttcacatcg acaaagatcg tcggttcgac
     8581 gaactggccg cctgacaggt cgggggatgt cgcgggcccg ccgcccagga tgcaacggga
     8641 atcctcggct ttggcaatct cgatgtaatc caggattttc ctctactggg gcgccatggt
     8701 aaccggcccg atattggtat ccggcaacat aggatcaccc ttgcgcgccg tgcggcccag
     8761 ttcgaccagg cgttggctga actcttcgcg gatcgcgttc tgccccagcg cgcgggaacc
     8821 ggcgatgcag ctctggccag tggccgcaaa aatgcccgag atcacccccg aaatcgccgc
     8881 atcgatgtcg tagtccgcaa acacgatgtt gggcgacttg cctcccagtt ccagcgacac
     8941 acgtttcaac gtctttgcgg cctgcgcgta gatgcggggc cccgtcatgt ccgatccagt
     9001 gaatgtgacc ttggcgacct ccggatggtc gaccaacgcc gacccggctt ccggcccata
     9061 ttcgccgaga tccgtcatgt gcgcgtcccc ttggggaagg ggcttgcgtt cgcgaacgaa
     9121 cccgcctaca gacctgctca aggcgcgggc gtagctcagg ggtagagcac aaccttgcca
     9181 aggttggggt cgagggttcg aatcccttcg cccgctccaa atttccctag ggaaatcaag
     9241 cgaataaaaa cagcccttcg gggccgtttt tgcttcccca cccctggcgc caatgccagg
     9301 gaagcagcag gaagcatgtc gtagccggcc gcttccagcg aatgtgtgaa ctcgctgtat
     9361 ggcatgtccg cgttccgagt gcgcttgctt ccccaaagcc caagaccctc tcggatttgc
     9421 ttccccgtgc gcttgtcagc gccgcctgaa taatccccaa aagtggcagt tggaaattcc
     9481 ccacttcgtt gcgccaggcg ttcgctcctg agctagctca ggagccagca cccagcgcga
     9541 tcgccgaagc tgctcccctg cttggaggga gcaaacttgt ggtttgactt ggggagccca
     9601 tgatgatctt ggacctgcac cggcagaggc ttagcccgac tgccatcgcc cgtcagctcg
     9661 gcatcgaccg caagacggtg tgcaaataca ccgctcccgg catggatccg ccaaattacc
     9721 gcgcacagcc acgccgaccg cggcgcaccg acgacttccc gccgtatctg cgggaacatc
     9781 tggcagccta ccccggcttg accgccgtcc ggctccggcg ggagctgcac gagcatggct
     9841 cggcagcgca ggcgaggtgc cgatgattcc gtactttgca gtctgcgcct ccagcgcgcg
     9901 cgccagcata tcgttgcgct gttccagcac cctggtcttc tgctccatcg ctgcgttgag
     9961 ttcgaggaac tgc
//
LOCUS       DATAVD010001607         8481 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1641136, whole genome shotgun sequence.
ACCESSION   DATAVD010001607 DATAVD010000000
VERSION     DATAVD010001607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8481
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1641136"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1653)
                     /locus_tag="VHX39_30775"
     CDS             complement(<1..1653)
                     /locus_tag="VHX39_30775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995576.1"
                     /translation="MAKSPVRGKPTQADPSPERRLAAILAVGIEGYALLMRDDDDRAH
                     RRVSQELDRLRSAVTLASGTIFSFAGDGMMAEFTSATEALKCALRVQAASAGRMVRAA
                     EPIRFRIAVNAGEILAGKRHVGGAAINLAASLARIAPPGGIVLPSTLHDQIRHAVPVP
                     ADPMSEPDLDEPLAIVSISIEACLTWAGDTKPARKAAAPRLDVDPRASLAIVPFRSVE
                     AAGAFADSSTDGVIRILGGMATWLSVTRTPAASVRAPIDLQRLRQTSGARYILHGSAE
                     AERDIARLTVELNEAETGRVLWSDRFDHRLKDPTDSRDDPASRIARAIPPLLLQRELD
                     RSALIRFDMLTAHDLALRAYTAIMRPERHTFEAAADMLRLAQQRPGPHASTWFALVWW
                     HFMAVSQGWCADPATEARAAADAAARMDRNDPSAMALLAFMHSVLHRDHAVAAAMLDR
                     VIDAAPHCGMAECLKGLTLSWLGEAQAAIFHAEQAALMPALGPERAWQDHVTAGAHYV
                     AGRYADAARWARVSAMHHPGLAANTRVLAASLAVLGRLDEAQQ"
     gene            complement(1715..2485)
                     /locus_tag="VHX39_30780"
     CDS             complement(1715..2485)
                     /locus_tag="VHX39_30780"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3995577.1"
                     /translation="MTNGFAAYPSLRDRVVLVTGGASGIGAEHVTQFARQGAKVAFLD
                     IADAAAARLIDTLHAEGVLPPLYLPCDLKDIPALQAAIAAVGRQLGPITILVNNAAND
                     QRHDYQEVTVEYWDERMATNLRHQFFTIQAVAPMMRAAGGGSIINFGSISWHTNHGSM
                     PAYTTAKAGIEGLTKGMARDLGPDGIRVNCVIPGWIMTQRQIDLWLTPEAEENLLRAQ
                     CLKTKLVPADVTRMVLWLASDDSRMCSSQLWVVDGGRL"
     gene            complement(2482..2988)
                     /locus_tag="VHX39_30785"
     CDS             complement(2482..2988)
                     /locus_tag="VHX39_30785"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008495368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046316 - gluconokinase activity [Evidence
                     IEA];
                     GO_process: GO:0046177 - D-gluconate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HEX3995578.1"
                     /translation="MTIVIVMGVSGSGKTTVAEGVARGEGWILLEGDSFHPEANIAKM
                     EAGTPLTDDDRWPWLRAIAAREDALRAAGQSAVVACSALKRSYRDILIGGRPDTVLMY
                     LRGSKALIAERMKARKHHFMPPALLDSQFATLEEPGPDEKPIIVDVGPPADVTVQNAI
                     RLLKEHLS"
     gene            complement(2985..3968)
                     /gene="gnd"
                     /locus_tag="VHX39_30790"
     CDS             complement(2985..3968)
                     /gene="gnd"
                     /locus_tag="VHX39_30790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010667286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating 6-phosphogluconate
                     dehydrogenase"
                     /protein_id="HEX3995579.1"
                     /translation="MQIGVVGLGRMGANISRRLMKAGHSSVVWDASQAAIDALGNDGA
                     TTASGLQDLVGKLTGSPKAVWVMLPHGKITEDTIDALTGMMAKGDIIIDGGNTYYKDD
                     IRRGKALAAKGLRYLDVGTSGGVWGLQRGYCMMIGGDADAVKHLDPIFSALAPGIGTI
                     ERTPGREERDARAELGYIHAGPVGAGHFVKMIHNGIEYGMMQAMAEGFDILRNKASTA
                     LPADERYDLNMGDIAEVWRRGSVVSSWLLDLTADALAKDEKLEAFSGEVEDSGEGRWT
                     IEAAIEEAVPADVLAASLFTRFRSRQHHTFAEKVLSAMRFGFGGHVEPKKK"
     gene            complement(4345..6534)
                     /locus_tag="VHX39_30795"
     CDS             complement(4345..6534)
                     /locus_tag="VHX39_30795"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3995580.1"
                     /translation="MTSRRAFLKISAIAGGGFMLRAMLPSVAKSDEAAQPLNAFVSIS
                     PDGTVTIMSKNPEIGQGIKTMLPMVIAEELDADWKQVKIEQASLDEARYGRQFAGGSM
                     ATPLNYDPLRRVGAAGRQMLVTAAAQEWGVPLTECRTEGGVVHHDGSGRSLGYGALAS
                     KAVHVPVPNLRDVTLKDPKTFKIIGRRIPGVDNIKVVTGQKLFGIDVEVPGMLHAVFQ
                     KCPVFGGRIVSANTDAIKKLPGIHDAFIVRGQPGPDHQSLADGVAILAKSWWIANRAR
                     QKLDIVWDEGPVAAQSTEGFARDAVRLAKGAPGSWLRRDGDAAGAMKGAAHVVEAAYA
                     YPFLSHIDLEPQNCTAHVQDGKVVLWAPTQNPGPGQKLVAATLGIPASDVTVNMTRIG
                     GGFGRRLRNDFMAEAAWIAKQAGVPVKLLWNRADDMRHDFYRPAGFHFFKAGLDDKGG
                     LVAFTDHFVTFGQNGRPADSAQMDANEFPALLVPHLEYGQSVMPLGVPTGPMRAPRSN
                     ALGFAFQSFIDELAHQGGQDPVAFRLALLGPPRVLVNSSGKPDALRDFSTLRMHNVVA
                     KVAELSGWADRHTLPKGTGKGVAFYFSHLGYFAEVVQASVAASGDVTLDHVWVVGDVG
                     SQIINPSGAENQVQGAALDGLGAALGQAITIDRGRVVQANFDTVLPLRINQAAPVTVH
                     FLVTDHPPTGLGEPALPPVIPALCNAIFAATGKRIRSLPIDTGMLKT"
     gene            complement(6531..7010)
                     /locus_tag="VHX39_30800"
     CDS             complement(6531..7010)
                     /locus_tag="VHX39_30800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019089512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX3995581.1"
                     /translation="MYTIKINGVDKTVDVDGDMPLLWVLRDELDLKGSKFGCGAGLCG
                     ACTVHLDGAAVRGCQTAISDVGKSAVSTIEGMAADPVGRRLQAAWMDLDVPQCGYCQA
                     GQIMTATALLRQTPHPSDSDIDAAMTGNVCRCCSYTRIRAAIKQAASGHAGEKGERS"
     gene            7163..8449
                     /locus_tag="VHX39_30805"
     CDS             7163..8449
                     /locus_tag="VHX39_30805"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX3995582.1"
                     /translation="MSSAAPLPPSLYADTAVPAPATPPLDGDRCAHVAVVGGGFTGLS
                     AALHLAEMGADVTLLEAHEPGWGASGRNGGQVNPGLKYDPDRVEADFGPDLGRRMVAL
                     SGNAPDFVFNLIQRHQISCAALQSGTLRSSTSRKGSTEVRASAEQWVRRDAPVSILER
                     DEIALATGTGRYQTAMLDRRGGQLDPLSYARGLARAAMRQGVAIHGATKVRQVRKTTS
                     GWRLTTPHGTVTADKLILATNGYTDDLWPGLRRSVVPLFSAIAATEPLPEALAQSIMP
                     SRCSLYEVGTITVYYRIGLDNRLLIGGRSVQRDVTTPEALRYLTGYAVRLWPALREIR
                     WSHGWSGRLAATQDHYPHIHEPDENVLVCLGYNGRGVAMSSAMGPELARRIIGGRTAD
                     IDMPVTTLRKIPFHGLWRSGVAARIAYGRIQDMLGL"
BASE COUNT         1533 a         2883 c         2546 g         1519 t
ORIGIN      
        1 ctgctgtgcc tcgtccaacc ggccaagcac cgccaaactg gctgcaagta ctcttgtatt
       61 ggcggcgaga cctggatgat gcatcgccga cacccgcgcc cagcgcgcgg catcggcata
      121 acgcccggcg acatagtgtg cccccgccgt cacatggtcc tgccacgccc gctcgggacc
      181 caaggccggc atcaatgcag cttgctcggc atggaagatc gccgcctgcg cctctcccag
      241 ccaactgagt gtcagaccct tcaggcattc ggccatgcca cagtgcggcg cggcatcgat
      301 gacccggtcc agcatggccg ccgccaccgc gtggtcccga tgcaatactg aatgcatgaa
      361 cgccagcagc gccatcgccg acggatcgtt gcgatccatg cgtgctgcgg cgtcggccgc
      421 ggcgcgcgcc tcggtggccg gatcggcgca ccaaccctgg ctgaccgcca tgaagtgcca
      481 ccataccagg gcgaaccacg tgctggcatg cggccccggt cgttgttggg ccagccgcag
      541 catgtccgcg gcggcttcga acgtatgccg ttccggccgc atgatcgccg tataggcccg
      601 cagcgccaga tcatgggcgg tcagcatgtc gaaccggatc agcgccgacc ggtcgagttc
      661 gcgctgcagc agtaacggcg gaatggcacg ggcaatccgc gacgccggat cgtcgcggga
      721 gtcggtcgga tccttcaacc tgtggtcgaa ccggtccgac cacagcacac ggccggtctc
      781 ggcttcgttc agctccacag tcaatcgcgc gatatcgcgt tcggcctcgg cggatccatg
      841 caggatatag cgcgcaccag aggtttgccg cagccgctgc aggtcgatcg gcgctcggac
      901 cgaggcagcc ggcgttcgcg tgaccgacaa ccatgtcgcc ataccgccga ggatgcggat
      961 tacgccatcg gtcgaggaat cagcgaacgc accggcagcc tccacggacc ggaacggcac
     1021 aatagccagg gaggcgcgcg gatcgacatc aagccggggc gcggcggcct tgcgggccgg
     1081 tttagtatcg ccggcccatg tcaggcaggc ctctatcgat atggaaacga tggctaacgg
     1141 ttcgtccagg tccggctcac tcatcggatc ggccggaacc ggcacggcat gccgaatctg
     1201 gtcatgcagc gtactgggca acacgatacc gcctgggggg gcaatacgcg ccagactggc
     1261 ggcaaggttg atcgcggcgc caccaacatg acgtttgccg gccaggatct cgcccgcgtt
     1321 caccgcgatg cgaaatcgga tcggttcggc ggcacgcacc atgcgcccgg cagaggcggc
     1381 ctgtacccga agggcgcatt tcagtgcctc ggtcgcgctg gtgaattccg ccatcatgcc
     1441 gtctccggcg aacgaaaaga tggtcccgga ggccaaggtg acggcggagc gcaaccggtc
     1501 cagttcctgg ctgacccgcc gatgcgccct gtcgtcatcg tctcgcatca acagcgcata
     1561 gccttcgatc ccaaccgcca ggatggctgc cagccggcgt tcgggcgatg gatcggcctg
     1621 ggtcggcttg cctcgcactg gactcttcgc caccggacac tccgccaccg gactctcgcc
     1681 gttacattac ggtaatccgg agcgtaccag caatctataa ccggccgccg tccaccaccc
     1741 acaattgact gctgcacata cggctgtcat ccgacgcgag ccacaacacc attcgcgtga
     1801 catcggccgg caccagcttg gttttcaggc actgggcccg cagcaggttt tcttcggctt
     1861 ccggggtcag ccacaggtcg atctgccgct gggtcatgat ccacccggga atgacgcagt
     1921 tgacccggat gccatcaggc ccaaggtcgc gtgccatgcc tttggtcaag ccttcgatac
     1981 cggccttggc ggtggtgtat gccggcatgc tgccatgatt ggtgtgccag gatatcgagc
     2041 cgaaattgat gatcgacccg ccgccggccg cgcgcatcat cggcgccacc gcctggatgg
     2101 tgaagaactg atggcgcaga ttggtcgcca tccgctcatc ccagtattcg accgtgacct
     2161 cctggtagtc gtgacgctgg tcgttcgccg cgttgttgac caggatggta atggggccca
     2221 actgccgtcc caccgctgcg atcgccgcct gaagcgcagg aatgtccttc aagtcgcacg
     2281 gcagatacaa gggcggcaaa acgccctccg catgcagtgt atcgatcagc cgggccgccg
     2341 ccgcgtcagc aatatccaga aaggcgacct tcgccccttg gcgggcaaac tgggtcacgt
     2401 gttcggcgcc gatgccgctg gcgccgccgg tgaccagcac gacgcgatcc cgcaggctgg
     2461 gataggcggc gaaaccattg gtcacgacaa atgctccttc aacaggcgga tcgcgttctg
     2521 aaccgtgacg tccgccggag ggccgacatc gacaatgatc ggtttctcgt ccggacccgg
     2581 ttcctccagt gtggcaaact ggctatccaa cagcgcgggt ggcatgaagt gatgttttcg
     2641 agccttcatc cgttcggcga tcagcgcttt tgacccccgc aggtacatca gcaccgtatc
     2701 gggccgcccg ccgatcagga tatcacgata tgaccgtttc aacgccgaac aggccaccac
     2761 ggccgactgg ccggcggccc gcaaggcatc ttcccgcgcg gcgatggccc gcagccaggg
     2821 ccatcgatcg tcatcggtca gcggcgtgcc ggcctccatc ttggcgatgt tggcttcagg
     2881 atggaaggag tccccctcca gcaagatcca cccctcgccg cgcgccacac cctcggcgac
     2941 cgtagtcttg ccgctgcccg acacgcccat gacgatgacg atggtcattt ctttttcggc
     3001 tcgacatgac cgccgaagcc gaatcgcatg gcggacagga ctttctcggc gaaggtgtgg
     3061 tgctggcgtg accggaagcg ggtgaacagc gaggccgcca gcacatccgc cggcacggct
     3121 tcctcgatcg ccgcctcgat ggtccagcgg ccctcaccgg aatcttcgac ttcgccagaa
     3181 aacgcttcca gcttctcatc cttcgccaac gcatcggcgg tcaggtcaag caaccaggaa
     3241 ctgaccacgc tgccacgccg ccagacctcg gcgatgtcgc ccatgttcag gtcgtaacgc
     3301 tcatccgcgg gcagcgcggt cgaggccttg ttgcgcagga tgtcgaagcc ctcggccatc
     3361 gcctgcatca tgccgtattc gatgccgttg tggatcatct tcacgaaatg cccggcaccg
     3421 accgggccgg cgtgaatata acccagttcg gcgcgcgcat cgcgttcttc ccggcccggc
     3481 gtccgctcga tcgtgccgat tcccggcgcc agggcggaaa agatcggatc caggtgcttc
     3541 accgcatcgg cgtcgccgcc gatcatcatg cagtagcccc gctgcagccc ccagacgcca
     3601 cccgaggtac cgacatcgag atatcgcagg cccttcgcgg ccagtgcctt ccctcggcgg
     3661 atgtcatcct tgtagtaggt gttgccgccg tcgatgatga tatcaccctt ggccatcatc
     3721 ccggtcagtg cgtcgatcgt gtcctcggtg atcttgccat gcggcagcat gacccaaacc
     3781 gccttgggcg atccggtcag cttaccgacg aggtcctgca gcccgctggc ggtcgtggcg
     3841 ccgtcgttgc ccagggcgtc gatcgccgcc tggctggcat cccaaacgac cgaggagtga
     3901 cccgccttca tcaaccgcct ggagatgttc gcacccatgc gtcccagtcc caccacgccg
     3961 atctgcatcc cgaactccct ttgccgtcac ccgcggcaac tgcgcaggat cgtggcgcgt
     4021 accctgccat atagtgcgcc catggcaagc cgcctgccgc ggatcgggcc tggcaagacg
     4081 cgccgcccgc ggcacattcg tcatatacac cggtcggtga tcgggcgatc ttcttctcgt
     4141 atgcgttacc gaacgagtta acgggccaat aatactgcca gaagcgacca tatgtccggt
     4201 ggaggaacga tcggatgcga acaacagaat ttcgtcgcct cttgcgattg gctgccacag
     4261 gcgcagtggc gttaggggcg tcgcgcccgt cgctatctga gtccatagcc agtcagatcc
     4321 gagacaaacg caatatagcg agcgctaagt cttcaacatc ccggtatcga tcggcaggct
     4381 acggattcgc ttcccggtgg cggcgaagat cgcgttgcac agcgctggga tgaccggcgg
     4441 tagcgcgggt tcacccaaac ctgtgggcgg atgatcggtc accaggaaat gcaccgtcac
     4501 cggcgccgcc tggttgatcc gtagcggcag taccgtatcg aaattcgcct gtaccacgcg
     4561 gccacgatcg atggtgatcg cctgcccgag cgcggctcca agcccatcga gggcggcacc
     4621 ctggacctgg ttctcggcac cactggggtt gatgatctgg ctaccgacgt cgccgaccac
     4681 ccagacatgg tccagcgtga catcgcccga ggcggcaacc gacgcctgca ccacctcggc
     4741 gaagtagccc agatggctga agtagaacgc tacgcccttg ccggtcccct tgggtagcgt
     4801 gtgacggtcc gcccagccgg acagctccgc cactttcgcc accacgttgt gcatccgtaa
     4861 ggtgctgaaa tcgcgaagcg catccggctt gccggaggaa ttgaccagca ccctgggcgg
     4921 ccccagcaac gccaggcgga acgccaccgg gtcttgtccg ccctgatgcg caagctcatc
     4981 gatgaaggac tggaaggcga aacccaacgc attcgatcga ggtgcccgca tcggtccagt
     5041 cggcacgccc aacggcatta ccgactggcc gtattcgaga tgcggaacca aaagcgccgg
     5101 aaattcgttg gcgtccatct gggcggagtc cgccggcctg ccgttctggc cgaaggtgac
     5161 gaaatgatcg gtgaacgcga ccagaccgcc tttatcgtcc agtccagcct tgaagaaatg
     5221 gaacccggcc ggccggtaga aatcgtgccg catgtcgtcg gcgcggttcc acagcagctt
     5281 gaccgggacg ccggcctgtt tggcgatcca ggccgcctcg gccatgaaat cattacgcag
     5341 ccgccggccg aagcccccac cgatgcgagt catgttgacc gtgacatcgc ttgccgggat
     5401 tcccagcgtc gccgctacca gtttttgccc cggcccgggg ttctgcgtcg gcgcccacag
     5461 cacgaccttg ccgtcctgga catgcgccgt gcagttctgc ggctccaggt cgatgtggga
     5521 gaggaacgga taggcatagg ccgcttccac cacgtgcgca gcccccttca tcgcaccggc
     5581 cgcatcgcca tcgcgtcgca accatgaccc gggcgcaccc ttggccagcc gaacggcatc
     5641 gcgggcaaac ccctcggtgc tttgcgcggc gaccggacct tcgtcccaca cgatgtcaag
     5701 cttctgccgg gcacgattgg cgatccacca gcttttcgcg agaatcgcaa cgccgtcggc
     5761 cagcgactgg tgatcgggtc ccggctgtcc ccggacgatg aacgcgtcat ggataccggg
     5821 cagcttcttg atcgcatcgg tattggcgct gacgatcctg ccgccgaaca cgggacactt
     5881 ctggaagacg gcatgcagca tgccgggcac ctcgacgtcg atgccgaaca gtttctggcc
     5941 cgtcaccacc ttgatgttgt ccacacctgg aatccgacgg ccaatgatct tgaaggtctt
     6001 cggatccttc aacgtcacgt cgcgtaaatt cggcaccgga acatgcaccg cctttgacgc
     6061 cagggcgcca tatccaagag aacgcccgct cccgtcgtga tgaacgacac cgccctcggt
     6121 acgacattcc gttagcggaa caccccattc ctgcgccgcc gcggtcacca gcatctgccg
     6181 tccggccgcg cccacccgtc gcagcgggtc gtaattcagt ggggtcgcca tgctgccgcc
     6241 ggcgaactgc ctgccatacc gagcctcatc cagcgacgcc tgctcgattt taacctgctt
     6301 ccagtcagcg tcgagttctt ccgcgatcac catcggcagc atcgtcttga tgccttgccc
     6361 gatctcggga tttttcgaca tgatcgtgac ggtgccatcg ggcgagatgc ttacaaacgc
     6421 attcagcggc tgagcggctt cgtcagactt cgctacggac ggcagcatcg cccgcagcat
     6481 gaatccgcca cccgcgatgg cactgatctt caggaaagcg cgacgtgagg tcatgaccgc
     6541 tctcccttct cgccggcatg tcccgaagcc gcctgtttga tcgccgcgcg aatgcgcgtg
     6601 tagctacagc agcggcacac attgccggtc atcgccgcat cgatgtcgct gtcgcttgga
     6661 tgcggagtct ggcgcagcag cgcggtcgcc gtcatgatct gcccagcctg acagtagccg
     6721 cattgcggca cgtccaggtc catccaggcc gcctgcagcc gccgcccgac cgggtcggcc
     6781 gccatgccct cgatggtgga aacggctgat ttgccgacat cggaaatcgc tgtctggcat
     6841 ccgcgcaccg ccgcgccatc caggtgcacg gtgcatgcgc cgcacagtcc cgcgccgcag
     6901 ccgaacttgc tgcctttcag atcgagttca tcgcgcagca cccagagtaa cggcatgtcg
     6961 ccatcgacat cgacggtttt gtccacgccg ttgatcttga ttgtataaat cataatttac
     7021 gccccatgtt cacatgcaga acgtagcgag catcagtcgc cgcttatcat agacttgccg
     7081 gcagcgctat caagctgtgc ccggcgatcc gatgttacat ggtcttgcga gactcaaagc
     7141 cgcgtaattg aatgccggga cgatgtcttc cgccgccccc ctgccgccca gcctctacgc
     7201 cgataccgcc gttccggcgc cggcaacgcc cccattggat ggggatcgat gcgcacatgt
     7261 cgctgtcgtt ggtggcggct tcaccggttt gtccgccgcc ctgcatctgg ccgagatggg
     7321 agcggacgtc acgctgttgg aggcgcacga acctggctgg ggggcgtccg gccgaaacgg
     7381 tggtcaggtc aatcccggtc tgaaatatga tcccgaccga gtggaggccg attttggtcc
     7441 cgatctcggc cgccggatgg tcgcgctttc gggcaacgca ccggacttcg tattcaattt
     7501 gattcagcga caccagatct catgcgccgc gctgcaatcc ggcacgttgc gctcctcgac
     7561 atcgcgcaag ggcagcaccg aggttcgtgc atccgcggaa caatgggtcc ggcgggacgc
     7621 cccagtctct atactggaac gggacgagat cgccttggcg accggaacgg gtcgctatca
     7681 aaccgccatg ctggaccgcc gaggcgggca actcgatccg ctcagttacg cacgcggtct
     7741 cgctcgggcg gcgatgcggc agggcgtcgc gatccatggt gcgacgaagg ttcggcaagt
     7801 ccggaaaacc acctccggct ggcgactgac aaccccgcac ggcaccgtga cagccgacaa
     7861 attgattttg gcgaccaatg gctacaccga tgacctgtgg cctggcctgc ggcgcagcgt
     7921 ggtacccctg ttcagcgcga tcgccgcgac cgaaccgctg ccggaggcac tcgcccagtc
     7981 gatcatgcca tcccgatgct cgctgtacga ggtcggcacc atcaccgtct attaccggat
     8041 cggtctcgac aaccgcttgc tgatcggcgg ccgcagcgtg caacgcgatg tcaccacgcc
     8101 ggaagcgctg cgctatctga ccggctacgc ggtacgcctt tggccggcat tacgggaaat
     8161 ccgctggtcc cacggctgga gcggccggtt ggccgccacc caagaccatt acccccacat
     8221 ccacgaaccc gatgagaacg tcctggtctg cctgggctac aacggccgcg gtgtcgcaat
     8281 gagttccgcc atgggaccgg aacttgcccg ccggatcatc ggcggcagaa ccgccgacat
     8341 cgacatgccg gtcacgacgc tacgaaaaat accattccat ggcctgtggc ggtccggcgt
     8401 cgcggctcgc attgcatatg gccgcatcca ggatatgctt ggtttgtagt cactcggccg
     8461 gagcgacggg cgctttgtcg g
//
LOCUS       DATAVD010001608         2115 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_337375, whole genome shotgun sequence.
ACCESSION   DATAVD010001608 DATAVD010000000
VERSION     DATAVD010001608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_337375"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2094)
                     /gene="glgX"
                     /locus_tag="VHX39_30810"
     CDS             complement(<1..2094)
                     /gene="glgX"
                     /locus_tag="VHX39_30810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019090829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004133 - glycogen debranching enzyme
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HEX3995583.1"
                     /translation="MLFRQRLLTDPLLPGRPYPLGATWDGLGVNFAVFSAHASSIELC
                     LFDPSGRREMSRLAFPECTDEVWHGYLPDAKPGQLYGYRAYGPYEPRAGHRFNPNKLL
                     LDPYARELHGELMWSDALFGYRVGSNRGDLTFDRRDSARAMPKGVVVDDSFNWGDDRP
                     PLVPWERTVIYEAHLRGLTCTDELVPPRERGTFAALANPHVIEHLQSVGITAIELMPV
                     HAFMQDRFLVERRLRNYWGYSTLAFFAPEPRYLVEPWMRNQVKVAVRRLHAAGIEVIL
                     DVVYNHTCEGSEMGPTLSWRGLDNASYYRLVPGAERHHINDTGTGNTLNVSHPRVLQM
                     VTDSLRYWVECYHVDGFRFDLGTILGREPSGFDPGSGFFDAVRQDPVLSRVKLISEPW
                     DIGPGGYQVGNHPPGFGEWNDRFRDGVRQFWNGAPDMRGDIAGRLSGSGDLFDHGRRR
                     PTASINFIASHDGFTLHDLVTYEQRHNEANGENGADGHDNNHSRNWGVEGETDDPEIN
                     ATRGAVKRAMLATLFASAGTPMLLAGDEMNRTQGGNNNAYCQDNAISYLDWDRAAGED
                     ARQLTDFTARLIALRQQYGTLRPSRFLHGDEVRDGIADSSWFDQHGKELTLEAWQEPE
                     ARTLTLRRAAVLPDGSLELMLILLNADSAEQNFGLPGPEVNWTMLLDTAQPELPETPL
                     ADGHFLVAAYGVALLT"
BASE COUNT          428 a          675 c          632 g          380 t
ORIGIN      
        1 cgtcagtagc gcgacaccat acgccgccac caggaaatgg ccatcagcca aaggcgtctc
       61 cggcagctcc ggctgggcgg tgtccaacag catcgtccag ttcacttccg gcccgggcag
      121 cccaaaattc tgctcggccg agtcggcgtt gagtaagatc aacatcaatt cgagcgagcc
      181 gtccggcagc accgcagcgc gccgcaatgt cagagtgcgc gcctccggct cctgccatgc
      241 ctcaagcgtc aattccttgc cgtgttggtc gaaccatgat gaatcggcga tgccgtcgcg
      301 cacttcatcg ccgtgcaaaa agcgcgacgg gcgcaaagtt ccgtactgtt ggcgcaatgc
      361 aatcagccgg gcggtgaaat cggtcaactg gcgtgcatcc tcgccggcag cacggtccca
      421 atccaggtag ctgatcgcgt tgtcctggca gtaggcattg ttattgccgc cctgtgtgcg
      481 gttcatttcg tcgccggcca acaacatcgg cgtgccggcc gatgcaaaca acgtggcgag
      541 catggcccgt ttaaccgcac cacgcgtcgc gttgatttcc gggtcgtcgg tttcaccctc
      601 aacgccccag ttgcgggagt ggttattgtc atggccatcg gcgccatttt ccccgttcgc
      661 ctcgttgtgg cgttgctcgt acgtcacaag atcgtgcaga gtgaaaccgt catgactggc
      721 gatgaaattg atactcgcgg tcggccgccg tctgccgtgg tcgaacaaat cccctgagcc
      781 cgacaagcgg cccgcgatgt cgcctcgcat gtccggagcg ccgttccaga attgccggac
      841 cccgtcgcgg aaccgatcgt tccactcgcc aaaccctggc gggtgattgc cgacctgata
      901 gccaccgggc ccgatgtccc acggctccga aatcagtttc acccgcgata ataccggatc
      961 ctggcgcacc gcatcgaaga aaccggaacc cggatcgaag cctgacggct cacgtccgag
     1021 aatggtgccc agatcgaaac ggaaaccatc gacgtggtag cactccaccc aatatcgcaa
     1081 gctgtccgtc accatctgca gcacgcgcgg atgggaaacg ttcagcgtgt tgccggtacc
     1141 ggtgtcgttg atgtgatgcc gttctgcacc gggaacgagg cggtaatagg acgcgttgtc
     1201 gagcccgcgc caggacagcg tcggtcccat ttcgctgcct tcgcaggtgt gattgtagac
     1261 gacgtcgaga atgacctcga tgccggccgc atgcagccga cgcacagcga cctttacctg
     1321 attgcgcatc cagggctcga ccagatagcg cggctcgggt gcaaagaagg ccagcgtaga
     1381 atagccccag tagttgcgca gccggcgctc caccaggaag cggtcctgca tgaatgcgtg
     1441 caccggcatc agctcgatgg cggtgatgcc aacgctttgc agatgctcga tcacatgcgg
     1501 gttggcgagc gcggcgaagg tgccacgttc gcgtggcggc accagttcat cggtgcaggt
     1561 aagaccgcgc agatgcgcct cgtagataac agtccgctcc cacggcacca acggcggtcg
     1621 gtcgtcgccc cagttgaaac tgtcgtccac aaccacgccc ttcggcatcg cgcgggcact
     1681 gtcgcgccga tcgaaggtaa gatcgccacg gttgctgccg acgcggtagc cgaacaacgc
     1741 atcggaccac atcaactcgc cgtgcaattc tcttgcgtaa gggtcgagca gcagcttgtt
     1801 cggattgaac cgatgcccgg cgcgcggttc ataagggcca taggcgcgat agccatacaa
     1861 ttggcccggt ttcgcatcag gcagatagcc atgccacacc tcgtcggtgc attccgggaa
     1921 agcgaggcgc gacatttccc gccggcccga tggatcgaac aggcaaagtt cgatcgaaga
     1981 ggcatgggcg gaaaacaccg caaagttgac tccgaggccg tcccacgtgg caccaagcgg
     2041 ataaggccgt cccggcaaca gcggatccgt caaaaggcgc tggcgaaaca gcatgtccac
     2101 gggtcagccc tccgg
//
LOCUS       DATAVD010001609         2302 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_898711, whole genome shotgun sequence.
ACCESSION   DATAVD010001609 DATAVD010000000
VERSION     DATAVD010001609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2302)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2302)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2302
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_898711"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(376..783)
                     /gene="ssb"
                     /locus_tag="VHX39_30815"
     CDS             complement(376..783)
                     /gene="ssb"
                     /locus_tag="VHX39_30815"
                     /inference="COORDINATES: protein motif:HMM:TIGR00621.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEX3995584.1"
                     /translation="MQKNYIELAGYLAAKPELRFLPSGTKVANVRLGETYHFAGRDGK
                     PQSHTNWHGLVFYSEVADVAMTYEQGENIHVEGSLQQRKFTPADGITRTVHEVHVKAC
                     HVIAATRLDREVPASPPISTETEVIRPDSSWPV"
     gene            complement(1227..1910)
                     /locus_tag="VHX39_30820"
     CDS             complement(1227..1910)
                     /locus_tag="VHX39_30820"
                     /inference="COORDINATES: protein motif:HMM:NF014581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HEX3995585.1"
                     /translation="MAFEGSEQKRNKHRLLFLIDEFPSLNRMEIFADALSYMAGYGLK
                     AYLITQDIRQIVDAYGQNESIVSNCHVRIAFAPNQVETAELLSKMTGTTTVQKASFNF
                     SGSRFSPVMSHVNASVDHIERPLMTPDEIMRLRPPKKEGSGDSEVITEPGDMLIFVSG
                     HFPILGMQMLYFADPELARRSAIPPPETTQRQIPARQPVQIDKPEFVTDADVTTGLER
                     GFVEELRRS"
     gene            complement(1955..>2302)
                     /locus_tag="VHX39_30825"
     CDS             complement(1955..>2302)
                     /locus_tag="VHX39_30825"
                     /inference="COORDINATES: protein motif:HMM:NF014581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HEX3995586.1"
                     /translation="GLFTRPGVEFRETLNEMLCYPHDTEYRYGWRTPGGLKTSTHPVV
                     SEKAQEMLDKESKELSGVLSTAKTALALYSDPLVARNTAASDFTINDLVNDDRPVSLY
                     LVVPPSDKIGFAV"
BASE COUNT          501 a          654 c          650 g          497 t
ORIGIN      
        1 gctcgtctgt gcctctgcga aatgagcaca cgcagcaatc aagaggatcc acgggcagta
       61 tagccagcgc attgagggag tatataccac caagcgccag aggcaccatc cgtcccggcg
      121 ctcgtgatac gaacgcaata acaaacaatg ctctaggcta ggaagaatgg gagccacaaa
      181 gttcagcgcg gcggctattc gagccggata aacaacattc tacgcgtggt gatgtcgcag
      241 caaaaattgt tgcggtctcc ccgatacatc gcgcaaagtc gggcagcgtt taccgttggt
      301 ctcgacggga ggttgggcgg atagacgttg gagacgaaca tcgtgcgcac ctgtggggac
      361 aacttccgga agggctcaaa caggccagct actgtcaggt cggatcactt ctgtttctgt
      421 ggaaatcggc gggctggctg ggacttctcg atccaatcga gtcgccgcga tgacgtggca
      481 ggccttgacg tgaacctcgt gaacagtccg agtgatcccg tcggccggcg tgaactttct
      541 ctgctgcaga ctgccttcga catgaatgtt ttcgccctgc tcatacgtca tcgcaacgtc
      601 cgcaacctcg ctataaaaaa caaggccgtg ccagttcgtg tgggattgcg gtttcccgtc
      661 acgcccggcg aaatgatacg tttcgccgag acggacgttg gccaccttcg taccggaagg
      721 aagaaatcga agttctggct tcgccgctaa atagcccgca agttcgatgt aatttttctg
      781 catctgtcac tccacccatc cgatggccgt tttggccagc taatgcttcc aaaggtgcgc
      841 ggccatcgga tggttcctga ccgtgcagaa gcggttgtta ttgcctgcca ttaaccgcaa
      901 ctgtttgatg gcaagggtaa ggcgctgcct gtgcaagtat ctctgcaatc cgaggcttct
      961 cgcgactgcc gtatgacctc ggagcccaaa ccggttccgc cagttgataa ctctattcgt
     1021 gaacgcaagt tgaagtcgga ataacttttt gcggtctcgg ccaatggatg cttccagact
     1081 tgcagtctcg gccatcagat ggttccagcg caggccaaga aggccccgcg gaagggctcc
     1141 gccagtgcgg ctggacgccg gaatgcggcc aactcatggt tccaatcgcg gccaacggat
     1201 gggtaaacgg acagcatata ttttggctat gaccgccgca attcctcgac aaagccacgc
     1261 tccaatcccg tcgtaacgtc cgcgtccgtt acgaactcgg gtttgtcgat ctgaaccggt
     1321 tgccgtgccg gaatctgtcg ctgcgtcgtt tcgggcggcg gaatcgcgga ccggcgcgcg
     1381 agctcgggat cggcgaagta gagcatctgc atcccgagga tgggaaagtg gccggaaaca
     1441 aagatgagca tgtcgccagg ctcggtaatt acttcggagt caccgctgcc ctccttcttc
     1501 ggcggtctga gccgcatgat ttcgtcaggc gtcatcagcg ggcgctcgat gtgatctacg
     1561 ctggcgttca cgtgagacat gaccggggag aaccgcgagc cggaaaaatt gaagctggcc
     1621 ttctgtacag tggtcgtgcc agtcatcttc gagagcagct ccgcagtttc aacctggtta
     1681 ggcgcgaatg caatgcgaac atggcaattc gacacgatac tctcgttctg cccgtacgca
     1741 tccacgatct ggcgaatgtc ctgcgtaatc agataagctt tcaacccgta tccagccatg
     1801 tacgagagcg cgtccgcgaa gatctccatc cggttcaaac tcgggaactc gtcgatcagg
     1861 aacagtaacc gatgcttgtt gcgtttctgc tcggacccct cgaatgccat ccgttcagtc
     1921 aaacgattga cgaccatcgt gaacatcaaa cggattaaac ggcgaagccg atcttgtcag
     1981 acggcggcac caccaggtac agagaaaccg gccggtcgtc attcacaaga tcattgatgg
     2041 tgaaatcgct cgccgctgtg ttccgcgcga ccagcggatc gctgtagagc gccagcgctg
     2101 tcttcgccgt tgacaggacg ccggatagtt ccttgctttc cttatcgagc atctcctgcg
     2161 ccttttcaga caccaccggg tgcgtcgagg ttttcagacc gccgggtgta cgccacccat
     2221 agcgatactc ggtatcgtgc ggatagcaga gcatttcatt cagcgtttcg cggaactcaa
     2281 cgccgggccg tgtaaagaga cc
//
LOCUS       DATAVD010001610         3338 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1081580, whole genome shotgun sequence.
ACCESSION   DATAVD010001610 DATAVD010000000
VERSION     DATAVD010001610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3338
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1081580"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1196)
                     /locus_tag="VHX39_30830"
     CDS             complement(<1..1196)
                     /locus_tag="VHX39_30830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX3995587.1"
                     /translation="MSETATTARSAGVIDAARTFLGERITTNAALREHHSHGQDTQPP
                     VMPDAVAFVESSEEVAKLLALCHAGRIPVVPFGAGTSLEGHVTPVRGGITLDLSRMTK
                     VLDVSQPDMDCRVEAGVTRDQLNAHLRDLGLFFPVDPGTAACTIGGMCATRASGTNAV
                     RYGTMRENSMGLTVALADGRVIRTGGRVRKSSTAYDLTRLFVGSEGTLGVITEIQLRL
                     HGIPEAMSSATCQFPTLRDAVETVIAVMQTGIPVARMELLDEVQIEACIGYSKLEGLQ
                     RLPTLFFEFHGTAASVQEQAQQTEEIAGGFDGSGFRWATDTTERNKLWQARHDAYWAC
                     LALKPGHQGIATDAIVPISRLNDAILGAKEDIAASGLTAPIVGHVGDGNFHTVILVPP
                     EPDGLA"
     gene            1290..2096
                     /locus_tag="VHX39_30835"
     CDS             1290..2096
                     /locus_tag="VHX39_30835"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3995588.1"
                     /translation="MHGIIACVIILSFLREVRGMGKLEGKVALVTGSGRNIGRATVLK
                     LAAEGAHVVVNARTNQAEADAVVREAQGLGVKAMALIADIGNKDQVEAMAAQALSAFG
                     RVDILINNAAVRPHKPFTELTQQDWESVRGVVLDGAVYLTRAVIASMVENHYGRILFF
                     TGEGAFVGGSGRAHVSAAKMGLVGFARGLASEFAAHDIRVNVVSPGSIDTLRANPEWY
                     GNRQPNAAGIPLGRQGKVDEIAATCLFLVSDDGGFITGQTIHVNGGAAYY"
     gene            2754..>3338
                     /locus_tag="VHX39_30840"
     CDS             2754..>3338
                     /locus_tag="VHX39_30840"
                     /inference="COORDINATES: protein motif:HMM:NF024795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hint domain-containing protein"
                     /protein_id="HEX3995589.1"
                     /translation="MACFVAGTGIATTRGLVPVETIHRGDRVCTVLDGDTAEVVWVGH
                     RKVDCARHPNPSKTWPVRVLAHAFGRGMPATDLVLSPDHAVYVDRVLIPVRLLVNDQN
                     VRQELTDRVAYHSIELAQHDVVLANGMPAESHLDTSDRSMFGNGGSVIALHPDFSTRA
                     WGSRGCAPLVQAGPILTALRKRLAADVVRRKRNLQ"
BASE COUNT          613 a          981 c         1102 g          642 t
ORIGIN      
        1 ctggcaagac cgtcgggttc cggcggcaca agaatgacag tgtggaaatt gccgtccccg
       61 acgtgaccga cgatcggcgc ggtcaggccg gatgcggcaa tgtcctcctt ggcgccaagg
      121 atggcgtcgt tgaggcgaga aatcggcacg attgcgtcgg ttgcgatccc ctgatggccc
      181 ggcttcaagg cgaggcaagc ccaatacgcg tcatgccgcg cctgccagag cttgtttcgc
      241 tcggttgtat cggtggccca ccggaagccg ctgccgtcga aaccgccagc gatctcctcg
      301 gtctgttgcg cctgctcctg gacgctcgct gccgtgccgt ggaactcgaa aaacagggtg
      361 ggcaaccgct gcaggccctc cagcttcgag tatccgatgc aggcttcaat ttgcacctcg
      421 tccagcagtt ccatgcgtgc caccggaatg ccggtttgca tgacggcgat cactgtctcc
      481 acggcatcac gcagcgttgg gaattggcag gttgcagatg acatcgcctc gggaatgccg
      541 tgcaggcgca actggatttc ggtgatgacg ccgagcgtgc cctcggagcc gacgaagaga
      601 cgggtcagat cgtaggcggt ggaggatttg cgtacgcgcc ccccggtgcg gatcacccgg
      661 ccgtctgcca gcgccacggt cagacccatc gagttctcgc gcatggtgcc gtaacggacc
      721 gcgttggtcc ccgaggcgcg ggtcgcgcac atgccgccga tggtgcatgc ggcggtgccg
      781 ggatcgaccg gaaaaaacaa gccaagatcg cgcaaatggg cattgagttg gtcacgggtg
      841 acgccggcct cgacgcgaca gtccatgtcg ggctgactga cgtcgagaac cttggtcata
      901 cgagacaggt cgagcgtaat accgccgcgg accggggtga cgtgaccctc gagcgaggta
      961 ccggcgccaa agggtacgac gggaattcgc ccggcgtggc aaagcgccag gagttttgcg
     1021 acctcctcgg aactttctac gaaggcaacc gcgtcgggca tgaccggagg ttgggtgtcc
     1081 tggccgtgcg agtgatgctc acgcagggcg gcattcgtgg tgatccgctc tcccagaaag
     1141 gtgcgggcgg cgtcgataac accggcggaa cgggcggtcg ttgccgtctc ggacattcgc
     1201 ggctcctgtt gcatgctgcc acgggtgtgg cgtgaggttc gcggtctgac aagggtcgcc
     1261 aaacgggatc atcagacggg atcgccagtt tgcatggcat cattgcctgc gtcatcatcc
     1321 tgtcgttcct cagggaggtg agaggtatgg gcaagcttga agggaaagtc gccttggtga
     1381 ccgggtcggg ccgcaatatc ggccgcgcaa cggtgctaaa gctggcggcg gaaggcgctc
     1441 acgtcgttgt caacgcgcgc acgaaccagg ctgaggctga cgccgtggtg cgtgaagccc
     1501 aggggctcgg ggttaaggca atggcgctta tcgctgatat cggcaacaag gatcaggtcg
     1561 aggcgatggc ggcacaagca ctgtccgcgt tcgggcgcgt cgacatcttg atcaataatg
     1621 cggctgtccg cccgcacaag ccgtttaccg agctaactca gcaagactgg gaatcggtgc
     1681 gaggggtcgt cctcgacggg gcagtgtacc taacccgcgc ggtcatcgcg tcgatggtcg
     1741 agaaccacta cggccgcatc ctgttcttta ccggagaagg cgcctttgtt ggcggcagcg
     1801 ggcgggcgca tgtttctgcg gccaagatgg gcctggtcgg gttcgctcgc gggctggcct
     1861 cagagtttgc tgctcacgac atccgggtca acgtggtttc gcccggcagc attgatacct
     1921 tgcgagccaa tcccgaatgg tacgggaatc ggcaaccgaa tgccgctggg atacccctgg
     1981 ggcgccaggg taaagtcgac gagatcgccg ccacgtgctt gttcctggtc agtgatgatg
     2041 gcggcttcat caccggccaa acgatccacg tgaacggcgg agccgcttat tactgatccc
     2101 ggcgcgctgc gcggagacgt cgggggaggc ctaaagccgg cgtgcaccga accgcttaac
     2161 cggtccgacc cgatacgtta ttattggcgg caaccattca cggtgggtga gtttgccagt
     2221 tgggcggtgc tgcgggatgt cggtcctcgg gaggatctgt gccctgtcac cgatgggccg
     2281 tcatcaccga tgcagggggg gcataaagcc ctgaacagac aatctcaaac ggcgcccgcc
     2341 gttgattttc gataaatcag ccgtgaccgg gtcgagcgtt cactgatccg taaccaggat
     2401 gcgtcaaata gacgatcaga ctgcgaaaaa tctcgccgta ccctcatcgc atcgccataa
     2461 cctggcgatt cttgcaacgc cggaacctga gcgccatgtc atcgcttccg cccttcggcg
     2521 gcaccacacg tcgcagtttc ttcccagttt ggggtgcccc gattgcctca ttcacccaca
     2581 gacggttcgc cgatcaattc tgctccgaca gcaggtggac gacgtctggc cgcaatctgc
     2641 gcggcgggcg ttggccgctg tcgctttcgg cggccctgaa atccgggcag acctcccaga
     2701 tcaaattcgg caacagcgtt ttgatcgctg gctggatacg ggcagcggcg taaatggctt
     2761 gttttgtggc cggcacggga atcgcgacca cccgagggct tgtcccggtc gagaccattc
     2821 atcgcggcga tcgggtttgc acagtcctcg atggcgacac ggctgaggtc gtctgggttg
     2881 gccaccgcaa agtggattgc gccaggcatc ccaacccctc aaagacttgg ccggttcgcg
     2941 tattggccca tgcgtttggg cgcggcatgc cagctaccga tttggtattg tcgccggacc
     3001 acgcggttta tgtcgacagg gtgttgattc cggtccgcct tctggtgaac gaccaaaacg
     3061 tgcgccagga attgacggac cgggtggctt accactcgat cgagctcgct cagcatgatg
     3121 tggtgttggc gaatgggatg ccggcagagt cgcatttgga cacgagcgac cgttcaatgt
     3181 tcggtaatgg cggcagtgtg atcgcgttgc acccggattt ctccacgcga gcgtggggca
     3241 gccgtggttg cgcaccactg gtgcaggccg gcccaattct gacagcactc aggaagcggt
     3301 tggcagccga cgtggtgcgg cgcaaacgaa acctgcaa
//
LOCUS       DATAVD010001611         5026 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_898947, whole genome shotgun sequence.
ACCESSION   DATAVD010001611 DATAVD010000000
VERSION     DATAVD010001611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5026
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_898947"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..518
                     /locus_tag="VHX39_30845"
     CDS             <1..518
                     /locus_tag="VHX39_30845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995590.1"
                     /translation="HGYVPDCLKSTVTNPIPDTPFHATDEMVSAANRQVGAMHAMPDI
                     PLPYSAVYHTWNEDPYGGGWHEWKSNFRLDEIMCRMRKPVDDQNIFIVGEAYSYGQGW
                     VEGALDIAESMLEDFFGLTRPTWITDPNYALMPNPCPGCGDLSGGVKVTNAQQTLDDA
                     TPSCLNPPAVG"
     gene            522..2216
                     /locus_tag="VHX39_30850"
     CDS             522..2216
                     /locus_tag="VHX39_30850"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3995591.1"
                     /translation="MNVAQYIIARLREVGVQHVFTVPGDYAAPFIDVLDSSPGITRIA
                     NINELGSGYAADGYGRYKGVGCACVQYGVGTFSLLDCVAGSFVERVPVVVISASPSTS
                     DRVLERTKKILFHHSTGDLQADRLVFQNVTVASLIIDDPAKAAEQIDTAFTAMLTHRR
                     PIYIEVLKNVWTLPCGEPSTTLTPIPTVSDPASLRAALDAAWARIQAARQPVIWAGVQ
                     IARFGLRDTLQALVDRSGLPFTTTSLGKTVLDEAQSQFIGTYAGPASPPSTWDFVSAS
                     DCVVALGTIITDDYLNIMASSFGAMIEVTEEEVRIGHQYYHQVTMRDFIEGLLARYES
                     TAPPPAKLPQRPAIPPPPQPSDHLTYNIFMVELADFLRRENLVGSTALVLGESTALYV
                     FGNLFDLPRDGFISNAAWGSLGHETGAALGVMLGSDKRAFVVAGDGGFRMVCQELSSL
                     VMAKKNAVIFVMSNNVYAIEQAFVNLDAFKPDGEFAPFDILPVWDYLSLAKGFGATGV
                     RADTVGSLRAVLSEVVKVTDGPVLVEVIIPEKDLAPQLERLAATPPTLRRANRRGG"
     gene            complement(2227..2490)
                     /locus_tag="VHX39_30855"
     CDS             complement(2227..2490)
                     /locus_tag="VHX39_30855"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995592.1"
                     /translation="MRRAELNEWLTHKIRPMFVGRILPISEDVMLQWRLLVEEGRKAG
                     HTFTQPDLIIAATGLHHGLTIVTRDTGDYSLMQAAVFNPWVDS"
     gene            complement(2647..2931)
                     /locus_tag="VHX39_30860"
     CDS             complement(2647..2931)
                     /locus_tag="VHX39_30860"
                     /inference="COORDINATES: protein motif:HMM:NF014643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEX3995593.1"
                     /translation="MPPRQSSGDRPNHWPLQNAKARFSELVRRAKSDGPQHVTIHGRD
                     EVVVISVEAFRRLSGAETGQALIDAFQSSQCRDFDIEPVRQAMPVRDVIL"
     gene            3113..4087
                     /locus_tag="VHX39_30865"
     CDS             3113..4087
                     /locus_tag="VHX39_30865"
                     /inference="COORDINATES: protein motif:HMM:NF028479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-alpha-hydroxyglycine alpha-amidating
                     lyase family protein"
                     /protein_id="HEX3995594.1"
                     /translation="MTGATSARAQGTAPPRTNLPNPYNAATSFGQMPTGRTWGATTTV
                     AIDRDGKSVWVFERCGAESCLDSKLPPILHFDPAGKLLASFGAGMFVFPHGIAVDPDG
                     NVWVADADGKNGKGQQVVKFSPTGKVLMKLGKAGMPGDAPGYFNRPTGVAIARNGDIF
                     VSDGHGDDSNARVVKFSKTGKFLMAWGKKGSAPGEFDVPHAIAVDSHERVYVADRSNN
                     RIQVFDANGKFLADWRQFGRPSGVYVDKNDIIYVTDSQTTDKAGCPTDLGCRHGIRIG
                     NTADGSVTAFIPRPAGDKVGPEGVATDANGTIYGASNEGKRVDRFTRK"
     gene            complement(4074..4895)
                     /locus_tag="VHX39_30870"
     CDS             complement(4074..4895)
                     /locus_tag="VHX39_30870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995595.1"
                     /translation="MPLSELQSAILRLLASHRNPDSYVTGATVLNWDGPRFSDDIDIF
                     HDREEAVARASEADAALLAGHGLGMQWLRREPGIHAAIVRRGDESTRLEWVRDSDFRF
                     FPVLKDDLFGYRLHIADLATNKALAAAGRREPRDVLDLLYIHERHLPIGAVIWAAVAK
                     DAGYSPESLITEIRRNARYLPDDYADLAVTTPIDAGVVSRRLRTVLQEAEAFVRIMPA
                     GREGLLFLKDGEPVQPDPDALDAYAAHGGRRGGYWPSSPEIGSAMVHRDDPLTSG"
BASE COUNT         1013 a         1746 c         1436 g          831 t
ORIGIN      
        1 accacggcta cgtgcccgac tgcctcaaat cgacggtcac caacccgatc cccgacacgc
       61 cgttccacgc caccgacgaa atggtctccg ccgccaaccg ccaggttggc gcgatgcacg
      121 ccatgccgga cattccgctg ccgtattcgg cggtttacca cacctggaac gaagacccgt
      181 acggcggtgg ctggcacgaa tggaagtcca acttccgcct ggatgaaatc atgtgccgga
      241 tgcgcaagcc ggtggacgac cagaacatct tcatcgtcgg cgaggcctat tcgtacggtc
      301 agggctgggt cgaaggcgcg ctcgacatcg ccgagtccat gctggaggac ttcttcggcc
      361 tgacacggcc aacctggatc accgatccga actacgcgct gatgccgaac ccgtgcccgg
      421 gatgcggcga tctgtccggc ggcgtcaagg tcaccaacgc gcaacagacg ctcgacgatg
      481 ccacaccgag ttgcctgaat ccgccggcag tggggtaagc catgaacgtc gctcaataca
      541 ttatcgctcg tttgcgcgaa gtcggggtgc agcacgtctt cacggttccc ggcgactacg
      601 ccgctccgtt tatcgatgtc ctggacagca gccctggcat cacccgcatc gccaatatca
      661 acgaactcgg ctcaggctac gccgcggatg gttacggacg ctacaaaggc gtcggctgcg
      721 cctgcgtgca atacggcgtg ggcacgttca gcctgctgga ctgcgtcgcc ggatcgttcg
      781 tggaacgggt cccggtggtg gtgatctccg ccagccccag cacgtcggac cgggttctgg
      841 aacgcaccaa gaagatcctg ttccaccaca gcaccggcga cctccaggcc gatcgcctcg
      901 tgttccagaa cgtcacggtg gcgtcgctga tcatcgacga tccggcaaaa gcggccgaac
      961 agatcgacac ggccttcacc gcgatgctga cgcaccggcg gccgatctat atcgaggtat
     1021 tgaagaacgt atggacgctg ccatgcggcg aaccatcaac gaccctgaca cccattccca
     1081 ccgtcagcga tcccgcatcg ctgcgcgccg ccctggatgc cgcctgggca cgcatccagg
     1141 ccgccaggca gccggtcatc tgggccggcg tgcaaatcgc ccgcttcgga ctgcgcgaca
     1201 ccctgcaggc cctggtcgat cgcagcggtc tgccatttac caccacctcc ctgggcaaga
     1261 cggtgctgga cgaagcccag tcgcaattca tcggcaccta tgccggtccc gcctcgcccc
     1321 ccagcacctg ggatttcgta tcggcctcgg attgtgtcgt tgcactggga accatcatca
     1381 ccgacgacta cctcaacatc atggcctcca gcttcggcgc catgatcgag gtgaccgagg
     1441 aagaagtccg catcggccac caatactacc accaggtcac catgcgcgac ttcatcgagg
     1501 gattgctggc ccgatacgaa agcaccgcac ctccgccggc gaaactgccg caacgcccgg
     1561 cgatcccgcc gcccccacaa cccagcgatc acctcaccta caatatcttc atggttgaac
     1621 tggccgattt tctccggcgg gaaaatctgg tcggcagcac cgcgctggtc ctgggcgaaa
     1681 gcacggccct ttacgtgttt ggcaatctct tcgacctacc ccgcgacggg ttcatctcca
     1741 acgccgcctg gggatcgctc ggtcatgaaa ccggcgccgc gctgggcgtc atgctgggca
     1801 gcgacaagcg cgccttcgtg gtggccggcg acggcggctt ccgcatggtc tgccaggaac
     1861 tctccagcct ggtgatggca aaaaagaacg ccgtcatctt cgtgatgagc aacaacgtct
     1921 acgccatcga gcaggcgttc gtgaacctgg acgccttcaa gcccgacgga gaattcgccc
     1981 cgttcgacat cctgcccgtc tgggattacc tctcgctggc caagggcttc ggcgccaccg
     2041 gcgtacgcgc cgacacggta ggcagcctgc gcgctgtcct gtccgaagtc gttaaagtaa
     2101 ccgacggccc cgtgctggtg gaagtcatca tccccgaaaa ggatctggcg ccgcaactgg
     2161 aacgactggc tgcgaccccg ccaaccctgc gaagggcgaa ccgccggggc gggtagaacg
     2221 acccgcctac gaatcaaccc aaggattgaa aaccgcggcc tgcatcagcg aataatcccc
     2281 agtgtcgcgc gtcacgatgg tcagcccatg atgcaacccg gtcgccgcga tgatcagatc
     2341 gggctgtgtg aaagtgtggc ccgccttccg cccctcttcg accaacagcc gccactgcag
     2401 catgacgtct tcactgatcg gcagaatgcg ccccacaaac atcggtcgga ttttgtgtgt
     2461 cagccattca ttcagttcgg cgcggcgcat cgggcgcgca ctcgattccg aagcggattt
     2521 cggcaaacgt caccgaactc acgaacagca ggtcgagcgg ctgcccgcga acgaagtcca
     2581 cgacacgctg ttcagggcga ggtctacgca actccgacag cacattcgta tggagcagcc
     2641 agcccgtcac aagatgacat cgcgcaccgg catagcctgc cggaccggtt cgatatcaaa
     2701 atcacggcat tgcgaagatt gaaacgcgtc gatcaatgcc tggccggttt cagcgcctga
     2761 aagccgccgg aacgcctcga cagagatcac cacgacctcg tcacgcccat gaatggtgac
     2821 atgctgcggc ccatcgcttt tggcccgccg caccaactca ctgaaacgcg ctttcgcgtt
     2881 ctgcaacggc caatgattcg gtcgatcacc ggatgattgg cgcggaggca tcggcaagtc
     2941 ctcaaaatct ggtcagttcg accagattaa ggatcaccca cgcgatttgc agccagtccg
     3001 cggcagtcgc aggcttcccc cgaacctgct aacgacagcc aaaacataaa aaggggaact
     3061 gtccatgcga ccaatcaagc tgtccggcct catcatcgcg gcaaccatcg ccatgaccgg
     3121 cgcgacatcc gcccgagcgc aaggcaccgc cccaccccgc accaacctcc ccaacccgta
     3181 caacgcggcc acctccttcg gccagatgcc caccggccgg acatggggcg ccacaaccac
     3241 ggtggccatc gaccgcgacg gcaaaagcgt ctgggtgttc gagcgctgcg gcgccgaaag
     3301 ctgcctcgac tcaaaactcc cgccgatcct ccatttcgat cccgccggca aactgctggc
     3361 gagttttggc gccggcatgt tcgtgtttcc gcacggcatc gccgtcgatc cggacggcaa
     3421 cgtgtgggtc gccgacgctg acggcaagaa cggcaagggc cagcaggtcg tcaagttcag
     3481 cccaaccggc aaagtgctga tgaagctcgg caaagccggc atgccgggag acgcccccgg
     3541 ttacttcaac cgccccacag gcgtcgccat cgcccgcaac ggcgacatct tcgtctccga
     3601 cggccacggc gacgactcca acgcgcgcgt cgtcaaattc tccaaaaccg ggaaattcct
     3661 gatggcctgg ggcaagaagg gcagcgcccc gggcgagttc gacgtcccgc acgccatcgc
     3721 ggttgattcg cacgaacgcg tctacgtggc cgaccgctcc aacaaccgga tccaggtatt
     3781 cgacgccaac ggcaaattcc tcgccgactg gcgccagttc ggtcgcccca gcggggtcta
     3841 cgtggacaag aacgacataa tctacgtcac ggattcgcag accacggaca aggccggctg
     3901 ccccaccgac ctcggctgcc gccacggcat tcgcataggc aacaccgcgg acggttcggt
     3961 cacggcgttc atccctcgcc cggcgggtga caaggtcggg ccggagggcg tggccaccga
     4021 cgccaacggc acgatctacg gcgcctcgaa cgagggcaag cgggtagacc gcttcacccg
     4081 gaagtaaggg gatcgtcccg gtgaaccatc gcgctgccga tttccggtga cgacggccaa
     4141 tacccgccgc ggcgtccgcc gtgcgcggcg taggcatcca gtgcgtccgg atccggctgc
     4201 actggctcgc cgtccttcaa aaaaagcaga ccttcccgcc ccgccggcat gatccgaaca
     4261 aacgcctcgg cttcttgcag caccgttcgc agacgccggg acacaacccc tgcatcgatc
     4321 ggcgtggtca cggccaaatc ggcgtagtcg tcgggtaggt agcgtgcgtt acgccggatc
     4381 tcggtgatga ggctctcggg cgaatagccg gcgtctttgg cgaccgcggc ccagatcacc
     4441 gccccgatcg gcaagtgccg ctcatgaata taaagcaggt caagcacatc gcgcggttcg
     4501 cgccgcccag ccgccgccaa tgccttgttt gttgccaaat cggcgatgtg caggcggtag
     4561 ccgaacaagt catctttcaa tacggggaaa aaccgaaaat cgctgtcgcg gacccattcc
     4621 agtcgcgtgc tctcgtcacc tcgccgcaca atggccgcat gaatacccgg ctcacgccgc
     4681 agccattgca tgcccaggcc atgtcccgcc agcaatgccg catccgcctc ggacgcccgc
     4741 gcaaccgctt cttcgcgatc atggaaaata tcgatgtcat cggaaaaccg ggggccatcc
     4801 caattgagta cggtcgcccc cgtcacgtag ctgtccgggt tccgatgcga cgccagcaga
     4861 cgcaggatcg cactctgaag ttcagagagc ggcacggcag gccgcttcga tttccaccgc
     4921 gagcggacgg gccttcatgt cgccctcccg ccgcaggctt tccgccacca caagggcctg
     4981 ggcgatcgtc ggacgatgac tgggtttacg actccacagc gcctgc
//
LOCUS       DATAVD010001612         4891 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1826519, whole genome shotgun sequence.
ACCESSION   DATAVD010001612 DATAVD010000000
VERSION     DATAVD010001612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4891
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1826519"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(189..1730)
                     /locus_tag="VHX39_30875"
     CDS             complement(189..1730)
                     /locus_tag="VHX39_30875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007396456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEX3995596.1"
                     /translation="MLLIDQIVRLIGRGMQLDPILREMLHLMSEMLGLNRGRVVLADA
                     DAKSCRIRYWYGLTRKEAERGRYALGEGITGRALALSQLIIVQDIDKDPTFLARAVER
                     ARLPATVVSFIAMPIMVSQKAVGVLACHRIRHRNRPMSSDVAIMRILASLTGQFLELN
                     AAMEQKTRVLEQRNDMLARALEAQTAKYGIIGTSPALLRAIEALERVSSTTATVLLLG
                     ASGTGKELFARALHLSSPRRDKPFIKVNCAAIPDTLFESELFGYERGAFTGASDARAG
                     WFEQASSGTIFLDEIGELPLQMQTKLLRTLQEGTITRLGGKREIKVNVRLVAATNRDL
                     QAEVTAGRFREDLFYRLNVIPIELPSLAERQEDIPTLVVHFTNRINAANQRNVNLTAS
                     AIARLQKHPWPGNIRQLSNLIERIVLLADKPVLDAEDIGPFLSLPPTAAAGIALRRVP
                     PPLGSAFPQVVRPYLDAHSHSAADLQRALLQCRGNKSQAAQLLGLTARQFAYRWGKFG
                     LDKSA"
     gene            complement(1992..2810)
                     /locus_tag="VHX39_30880"
     CDS             complement(1992..2810)
                     /locus_tag="VHX39_30880"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03619 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEX3995597.1"
                     /translation="MKYGIHLPHAGEQATPGLIRRHAERAEDLGLEDVWVSEHIIVPR
                     DKFPRSPLFFDPVLSLTWAAAVTKRVRLGTTVLVLPMRHPLPLAKELATLHNFSEGRL
                     ILGAGSGWLKEEFAALGVPFAERGRRLDEGIAMMRAVWSEDPVTFQSRYIPSVIEGMT
                     MTPMPVSPIPLWFGGSAEPALKRTIRIGDGWHGSSLTVAQAAPIVKRLREARPGPDFT
                     ISMRVQWDGTDRGVLRALVDDHAAIGVQHLLVAPQDRNVDDWEKVTEGVGALVA"
     gene            3091..4071
                     /locus_tag="VHX39_30885"
     CDS             3091..4071
                     /locus_tag="VHX39_30885"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
                     /protein_id="HEX3995598.1"
                     /translation="MATNKRKVMLPHTMGPAGIAIIRAREDVETVIYPAGISQADLLP
                     QLSDCAGIALSGTPYRQTEMDASPAMQVVARIGVGYDAVEVPALTARGVPLMTAGIAN
                     STSVAEQAFHLMIALAKKNAAMDRLVRGGRWTDRHGGLPMELSGKTVLIVGFGRIGTR
                     SARRCIGFDMTVLIYDPYVDAATVEAAGCEPVSDLDAALPRADFVSIHCPKNPETVGL
                     FNASRLGRMKKGAFLVNTARGGIIDEPALHAALTSGHLAGAGLDVFEEEPTPVNNDLL
                     TLDTVIASPHMAGVTVEAVAAMAVATARNILSVLDGEPNRDNVINKEVLR"
     gene            4211..4813
                     /locus_tag="VHX39_30890"
     CDS             4211..4813
                     /locus_tag="VHX39_30890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF938 domain-containing protein"
                     /protein_id="HEX3995599.1"
                     /translation="MNHEARTAPAAARNREPILHVLRDCLPPSALVLEIGSGTGEHAV
                     WFSSALPTLTWLPTDQDPEALKSIAAWREQARLANLLPPLLLDASAKTWPIAQADAVV
                     AINIVHIAPWATAQGLIAGAARVLTSGGLLYLYGPFREAGVHTSPGNAAFDADLRSRN
                     PSWSVRDLDEITAFASLHGFEPPSKVAMPANNLSVMFRRL"
BASE COUNT          891 a         1616 c         1515 g          869 t
ORIGIN      
        1 gaccgagtgg ccgggccgct catggaagtg ggtgcaaccg gtgtgccagc gcgccggtgg
       61 caccaacaaa tctacttagt gagttacttt caatgcctta aaccaatagg gtcagcaatg
      121 ggttcaattg ttcgacgttt acaatgtcaa caatgtcgac attgtaaacg ctataacctc
      181 gtaatgcctt aagcggactt gtcgagcccg aacttccccc aacgataggc aaactgccgg
      241 gcggtcaggc caagcaattg cgccgcctgg gacttgttgc cgcggcactg cagcagcgcg
      301 cgctgcagat cagcagccga atgcgaatgc gcgtcgaggt aagggcgcac gacctgtggg
      361 aatgccgaac cgagcggcgg cggaacccgg cgcagcgcta ttcccgccgc ggcggtcggc
      421 ggcagcgaca ggaacgggcc aatatcttcg gcgtccagca caggcttgtc agcgagcagg
      481 acaatgcgct cgatcaggtt ggacaactgg cggatgttgc ccggccaggg gtgcttttgc
      541 agacgggcga tggcggatgc cgtaaggttg acgttgcgct ggttggcggc gtttatccgg
      601 ttggtgaagt gtactaccag cgtcgggatg tcctcctggc gttctgccag cgacggcagt
      661 tcgatgggga tcacgttcaa gcggtagaac aggtcctcgc ggaagcgtcc ggccgtgact
      721 tcggcttgca ggtcacgatt tgtcgccgct accagccgca cgttcacctt gatctcgcgc
      781 ttgccgccca ggcgggtgat tgtgccctcc tgcaaggtgc gcagtagttt ggtctgcatt
      841 tgcaacggca gttcgccgat ttcgtcgagg aagatcgtcc cggagctggc ttgttcgaac
      901 caacccgcgc gggcatcgga ggccccggta aacgcgccgc gttcgtagcc gaacagctcg
      961 gattcaaaca gcgtgtcagg aatagccgca cagttcacct tgatgaaggg tttgtcgcgc
     1021 cgtgggctgg acagatgcag cgcccgcgcg aacagttcct tgccggttcc ggacgcgccc
     1081 agaagcagca ccgtcgcggt cgtcgaggaa acccgttcaa gcgcttcgat cgctcgcagc
     1141 agcgcaggcg aggtgccgat gattccgtac tttgcggtct gcgcctccag cgcgcgcgcc
     1201 agcatatcgt tgcgctgctc cagcaccctg gtcttctgct ccatcgctgc gttgagttcg
     1261 aggaactgcc cggtcaggct cgccaggatg cgcatgatgg cgacgtcgct ggacatcggc
     1321 cggttgcggt ggcggatgcg gtggcatgcc agcacgccca ccgccttctg gctgaccatg
     1381 atcggcatgg cgataaacga aacgacggtg gcgggcagtc ttgcccgctc gacggcccgc
     1441 gccaggaagg tcggatcctt gtcgatatcc tgcacgataa taagctggct gagggccagt
     1501 gcgcgccccg tgatcccctc gcccagagcg taacgacccc gctcggcctc tttgcgtgtc
     1561 aggccgtacc agtagcggat gcggcagctc ttggcgtccg catcggccag caccacccgg
     1621 ccacgattga ggcccagcat ctccgacatc aggtgcagca tctctcgcag gatggggtcg
     1681 agctgcatcc ccctgccgat cagccgcacg atctgatcga tcaacagcat ctcctgcgtc
     1741 cgccaaaacg ccggggaccc cttgacgctg gtcacgcttg ggcgggcgtt ggtgtccgtc
     1801 atgaatctca ctggttcgga tcaggtattg ccgtagatgc tacaacgcta tcacacgtta
     1861 ggctgtatcc ggtgtccagg aaccacgggc ggcaaatcga ggccgcgatc cgatagcgca
     1921 ttcaggagga cggattccgc cttttggcgg ctcgcctttt cttcggccat tgtggcgacg
     1981 atcgggcctc gttacgccac cagcgcgcca accccttccg tgactttctc ccagtcgtcc
     2041 acgttccggt cctgcggtgc caccagcagg tgctgcaccc caatcgccgc atggtcgtcg
     2101 accagtgccc gcaacacgcc gcggtcggtc ccatcccact gcacgcgcat cgagatggtg
     2161 aaatccggcc ccggccgagc ctcacgcaac cgtttcacga tcggcgccgc ctgcgcgacc
     2221 gtcaggctgc tgccgtgcca cccgtcgccg atccggatcg tccgtttcaa cgccggttcg
     2281 gcgctgccgc cgaaccacag cgggatcggg ctgaccggca tcggggtcat cgtcatcccc
     2341 tctataacgg acgggatata gcggctttgg aacgtcaccg gatcttccga ccagaccgcg
     2401 cgcatcatcg cgatcccttc gtccagccgc cggccgcgct ccgcgaacgg cacgcccaag
     2461 gccgcgaact cctccttcaa ccagccggaa ccggcaccca ggatcagccg tccctcggag
     2521 aaattgtgca aggtggcgag ttccttggcc aagggcaggg gatggcgcat cggcaacacc
     2581 agcaccgtgg ttcccagcct cacccgcttc gtcaccgccg cggcccaggt gagtgacagc
     2641 accggatcga agaacaacgg cgaacgtggg aatttatcgc gcggcacgat gatgtgctcg
     2701 ctgacccaga catcctccaa ccccaaatcc tcggcccgct cggcgtggcg gcggatcagt
     2761 cccggcgttg cctgctcacc ggcgtgaggc aaatgaatgc cgtatttcat cgtcgctttc
     2821 ccttccccgc ttcggccgca tcatacggct cgacccatgc gagtccgcaa ccccatgaag
     2881 cggataagcg gcggcagtgg gcacggtggg aacgctgaaa caacacgggt gcgcagggct
     2941 ggaaaccggg gatgcgttga tatcgccccg cgagcgtgtc atcacggcgc gacgatgggc
     3001 tgcctggcgg gaagggtgga ggcgcacagc gcctgcctga tggccacaag ggcgccacct
     3061 gaaacgccga ctgaagggga tacgccacaa atggccacca acaagcgcaa ggtcatgctg
     3121 ccgcatacga tgggccccgc ggggatcgcc atcatcagag cccgtgaaga cgtcgagacg
     3181 gtcatctatc cggccggcat cagtcaggct gaccttttgc cccaactgtc cgactgtgcc
     3241 ggtatcgccc tgtccggcac gccctatcgg cagaccgaga tggatgcctc cccggcgatg
     3301 caggtggtcg cccgcatcgg cgtcggctac gacgcggtgg aggtcccggc cttgaccgcg
     3361 cgcggcgtgc cgctgatgac cgccgggatt gccaattcca cctcggtcgc ggagcaggcg
     3421 ttccatctga tgatcgcact ggcgaagaaa aacgccgcga tggaccggct ggtacgcggc
     3481 ggccgatgga ccgatcgtca tggcgggctg ccgatggaac tgtccggcaa gaccgtgctg
     3541 atcgtcggct tcggccgcat cggcacccgc tccgcccggc gctgcatcgg cttcgacatg
     3601 acagtcctga tctacgatcc ctatgtcgac gccgcgacgg tcgaggccgc gggctgcgaa
     3661 ccggtaagcg atctcgacgc cgccctgccg cgcgccgatt tcgtgtcgat ccactgtccg
     3721 aaaaatcccg agacggtcgg ccttttcaac gcgagccggc tcggacgcat gaaaaagggt
     3781 gcctttctcg tcaacaccgc ccgcggcggc atcattgacg aaccggccct gcacgccgcc
     3841 ctcacctccg gccatcttgc cggcgccggc ctcgacgtgt ttgaggaaga gccgacacca
     3901 gtgaacaatg acctgcttac actggatacc gtcattgctt cgccgcatat ggccggcgtg
     3961 acggtggagg cggtcgccgc catggcggtg gcgaccgctc ggaacatcct ttccgtgctg
     4021 gatggcgagc cgaatcggga caacgtcatc aacaaggagg tgttgcgcta gccggcgacg
     4081 acccaccagc cgctcgcatc tggcaagctg ggcaatccga cccggcttgt cataagcaaa
     4141 acgacatcga tcgcctttcg gggctgcctc gtgaatttca aaccagccac catgccgacg
     4201 gagcacacgg atgaaccacg aggccagaac cgcaccggcc gcagcgcgta atcgtgagcc
     4261 catcctgcac gtgttgcgcg actgcctgcc gccatcggcg ctggtgctgg agattggcag
     4321 cggcacgggc gagcatgccg tgtggttcag cagcgctttg cccacactga catggctgcc
     4381 gaccgaccag gatcctgaag ccctgaagag catcgcggca tggcgtgaac aagcgaggct
     4441 ggcgaactta ttgccaccgc ttctgctcga cgcatcggcg aaaacctggc cgatcgcgca
     4501 ggcagacgcc gtggttgcga tcaacatcgt ccatatcgcg ccctgggcca ccgcccaagg
     4561 actgatcgcg ggtgccgccc gcgtcctcac ctcgggtggg ctgctctacc tctacggccc
     4621 gttccgcgaa gcaggcgtgc atacttcccc cggcaacgcg gcattcgatg cggatctacg
     4681 atcccgcaat ccatcctgga gcgtacgcga cctcgacgaa atcaccgcgt tcgccagctt
     4741 gcatgggttc gagccaccca gcaaagttgc catgcctgca aacaatctga gtgtgatgtt
     4801 ccgccggctc tgattcctgc caccgggcgg caatcgcggc ctggtggtcc ggccccgaca
     4861 gaggcatcca gtgcggtgaa gtgaatcgac c
//
LOCUS       DATAVD010001613         4165 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2759396, whole genome shotgun sequence.
ACCESSION   DATAVD010001613 DATAVD010000000
VERSION     DATAVD010001613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4165
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2759396"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..528
                     /locus_tag="VHX39_30895"
     CDS             <1..528
                     /locus_tag="VHX39_30895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEX3995600.1"
                     /translation="MPRRIYTYSGGMGWDDWNLVITVGAFLLAAGIVLTIINFIVSAK
                     SGQLAGPNPWNADTLEWSTPSPPPPYGSVHIPTVQSRHPLWDKHDEEYDPEDARVLDR
                     ERMTISTTWLDALPVGLAKMPDDSIWPLVLSLALSAIAALVLVKSMWWTLAPVVVGLL
                     VMAAWLWPKEEKHAE"
     gene            525..1181
                     /locus_tag="VHX39_30900"
     CDS             525..1181
                     /locus_tag="VHX39_30900"
                     /inference="COORDINATES: protein motif:HMM:NF012720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HEX3995601.1"
                     /translation="MNANALTESDGTSPQWVSAQAIRDLPIDQGRGSGAMAWFIASET
                     MVFLGLFFSYYYLGHRQSRWPIGDAPSLTLPTAMVFILFLSCIAVWAGGWLLRQGRHR
                     AARGALLLTVLLGCSFLVLNALDYNSEARIQPVTQNPYTSIFYTIGGVHAAHLILGLL
                     FLLYVAVLPRLGPTEKPPHGSYRNAAMYWYFVTAVWFVMYAIMYIGPHHTVGANPALN
                     "
     gene            1197..1601
                     /locus_tag="VHX39_30905"
     CDS             1197..1601
                     /locus_tag="VHX39_30905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995602.1"
                     /translation="MAAIQPPPTRPSIWYGIFAAPVAFGIQEILNWLISSGACPSGNP
                     ADIGGMPLFTNIRPVLWGIGALAVVTAAVALWIGIASWRQSHDPSFLSIRAQLRSDYQ
                     AAAAMLVSAVFLIAILWQTIGTFVLPVCGVVR"
     gene            1598..1987
                     /locus_tag="VHX39_30910"
     CDS             1598..1987
                     /locus_tag="VHX39_30910"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX3995603.1"
                     /translation="MSTSSALPAVATAASLLLLLGGCHGGRYTPPAEVVPGGNPQIGA
                     QLIESYRCGVCHTIPGIKDADGLVGPPLTLFARRTYVGGEVPNTPPNLVHWIMDPASI
                     EPGTAMPALGLNEQQARNVAAYLYTLR"
     gene            1996..3885
                     /locus_tag="VHX39_30915"
     CDS             1996..3885
                     /locus_tag="VHX39_30915"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HEX3995604.1"
                     /translation="MANDGRQRSTRWALAATTLTALALAGPAAYPQSSVSSPPPPTGE
                     GAPTPKQLNSLPPAADIHTVAPLADGQWTLPAGDYANTRYSPLNQINATNVATLKVVS
                     TMADGISHGWEGQPLVVGDTMYVVTPYPDKLIAIDLKAPQGPVKWIYNPNPDPRSQGV
                     ACCDVVNRGAVYADGKIIYNLLDVETVAVDAKTGKQVWRTSLGSIRTGTTMTMAPLVV
                     DGKVFVGNSGNELGTRGWITALNVSDGSIAWRAYSTGTDKDCLIGPDFKPYYAKDRGK
                     DLGITTWPPGQWKIGGGAVWGWISYDPETKLLFYGDGNPGTWDPTQRPGANKWSNTIF
                     ARNPETGQAVWAFQEDAHDAWDYDTTIENILVDMPWHGQMRKLLIHPGRMGFVQVFDR
                     TNGQLLSAEKYVPVNWARSYSLQTGLPDEDPAYRPHLGATTSNICPSSTGGKDWNPTA
                     FDPQTGLLYIQAHNVCMTDTPHKANYIAGTPYLGADVTMFPGPGGWEGALIAWDVKDA
                     RPVWTLQETKLPLFGGVLATGGNLVFYGTLDGWFRAVDARTGQILWQFKTSSGIVGEP
                     MTFVGPDGKQYIAVYSGIGGWLPAAALPSVSETDPTAALGTVGAVPDIKKYTSPGGVL
                     YVFAL"
     gene            3928..>4165
                     /locus_tag="VHX39_30920"
     CDS             3928..>4165
                     /locus_tag="VHX39_30920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995605.1"
                     /translation="MLRLFLITLAGLIPLGTSGCSASDPPPPNAAAPAVAAETAAATP
                     AAQLPGTPAHSAGGTVPPALAPVGPIPGPEIAGED"
BASE COUNT          715 a         1371 c         1320 g          759 t
ORIGIN      
        1 atgccgcgcc ggatctacac ctacagcggt ggcatggggt gggacgactg gaatttagtc
       61 atcaccgtgg gcgcgttcct cctcgccgcc gggatcgtgc tgactatcat caacttcatc
      121 gtgagcgcga agtccggcca attggcgggt ccaaacccct ggaacgccga cacgctggag
      181 tggtcgacgc catcgccgcc gccaccctac ggatcggtgc acattcccac cgtgcaaagt
      241 cgacatcctc tctgggacaa gcacgacgag gagtatgacc ccgaggatgc gcgggtcctt
      301 gatcgcgagc gcatgacgat ttccacgacg tggctcgatg cgctgccggt cgggctcgcc
      361 aaaatgccgg acgactcgat ctggccgctg gtgctctcac tcgctctcag cgcgatcgcc
      421 gctctggtgc tggtgaagtc catgtggtgg accctcgctc cggtcgtcgt ggggctgctg
      481 gtcatggcag cctggctctg gccgaaagag gagaagcacg ccgaatgaac gcgaacgcgt
      541 tgaccgaaag cgatgggacg agcccgcagt gggtgagcgc gcaggcgatc cgtgatctgc
      601 cgatcgatca gggtcgcggc agcggcgcaa tggcctggtt catcgcctcg gagacgatgg
      661 ttttcctcgg gctcttcttc agctactact acctcggtca tcggcagtcg cgctggccga
      721 tcggcgatgc gccgtctctg acgttaccga ccgcgatggt attcatcctc ttcctgagct
      781 gcatcgcggt ctgggcgggc ggatggttgt tgcggcaagg acgccaccgg gcggcccgag
      841 gcgcgctgct cctgacagtg ctgctcggct gcagctttct ggtgctcaat gccctcgact
      901 acaactccga ggcgaggatt cagcccgtta cccagaatcc ctacacgtcc atcttctaca
      961 ccattggcgg ggtacacgcg gcacatctga ttctcggcct tctcttcctc ctttacgtgg
     1021 ccgtgctgcc gcgcctggga ccgacggaga agccccctca cggctcctac cgcaacgcgg
     1081 cgatgtattg gtacttcgtg acagcagtgt ggttcgtcat gtacgccatc atgtacatcg
     1141 gtccgcacca tacggttgga gccaaccccg cgcttaactg aggggtcttc cagccgatgg
     1201 ccgcgataca acccccgccc acgcgcccga gcatctggta cggcatcttt gccgcacccg
     1261 tcgccttcgg catccaggag atcctcaact ggctcatctc gagcggcgcc tgcccttcgg
     1321 gcaatcccgc cgacatcggc ggcatgcccc tctttacgaa tatccggccc gtcctctggg
     1381 gcatcggcgc gctggctgtc gtcaccgctg ccgtggcgct gtggatcggg atcgcatcgt
     1441 ggcggcaatc gcatgatcct tcgtttctct cgattcgggc gcaactgcgc tcggattacc
     1501 aggccgccgc ggcgatgctc gtcagcgcag tgttcctcat cgcgattctc tggcagacca
     1561 ttgggacatt cgtgctgccg gtatgcgggg ttgtcagatg agcacatcct cggcacttcc
     1621 ggcggtcgcg acggctgcgt cattgctcct gctcctcggg ggttgccacg gaggccgata
     1681 cacgccgcct gcggaggtgg tgcccggcgg caatccgcaa atcggcgcgc agctcatcga
     1741 gagctaccgc tgcggtgtct gtcacacgat ccctggcatc aaggacgctg acgggctcgt
     1801 cgggccgccg ctcactctgt ttgcccgccg gacgtatgtg ggcggtgagg tgcccaatac
     1861 gccacccaat ctcgtccact ggatcatgga cccggcctcg atcgagcctg gaacggcaat
     1921 gccggcactc ggcttgaacg agcagcaggc gcggaacgtg gcggcctatc tctatacgct
     1981 gaggtgaatg acgtgatggc gaatgatggc aggcaacgat cgacccggtg ggctctcgcg
     2041 gccaccaccc tcacggcgct cgcgcttgcc ggccccgccg cgtacccgca atccagtgtc
     2101 tcctcgccgc cgcccccgac gggcgagggg gctccgacgc cgaagcagct caattccctg
     2161 ccgccagcgg cggacattca cacggtcgca ccgctggcgg acggtcagtg gactctgccg
     2221 gccggagatt acgcgaacac gcgatacagc ccgctgaatc agatcaacgc gaccaatgtg
     2281 gccaccctca aggtcgtctc gacgatggca gacggcatct cccacggctg ggaagggcag
     2341 ccgctcgtcg tgggcgacac gatgtatgtc gtgactccgt acccggacaa gctgattgcg
     2401 atcgatctga aggctccaca gggtccggtc aagtggattt acaatccgaa tcccgacccg
     2461 cggtcccagg gcgtcgcctg ctgcgatgtc gtgaacaggg gcgccgtcta tgccgacggc
     2521 aagatcatct acaacctcct cgacgtcgag acagtcgccg tggatgccaa gaccggcaag
     2581 caggtgtggc gcacgagcct cggaagtatc cggaccggca cgaccatgac catggcgccg
     2641 ctcgtggtgg acggcaaggt gttcgtcggc aattcgggga acgagctcgg gacacgcggc
     2701 tggatcacgg cgctgaacgt gagcgacggc tcgatcgctt ggcgggccta cagcaccgga
     2761 acggacaagg actgcctgat cgggcccgac ttcaagccct actacgccaa ggatcgcggc
     2821 aaggacctgg gtatcacgac atggccgccc gggcaatgga agatcggtgg cggcgccgtg
     2881 tggggctgga tctcctacga tcccgagacc aagctcctct tctacggcga cggcaatcca
     2941 ggcacgtggg acccgaccca gcggcctgga gccaacaagt ggtcgaacac gatctttgcg
     3001 cgcaatcccg agacaggcca ggccgtatgg gcttttcagg aggatgcgca cgacgcctgg
     3061 gattacgaca cgaccatcga gaacattctc gtcgatatgc cctggcacgg ccaaatgcgc
     3121 aagctcttga tccatcctgg acgaatggga ttcgtgcagg tattcgatcg cacgaatggt
     3181 cagttgctct cggccgagaa gtacgtgccc gtcaactggg cgcgctctta cagcctgcag
     3241 accggcctcc ctgacgagga tcctgcctat cggccgcacc tcggagccac gacgtccaac
     3301 atctgtcctt cctcgaccgg tggcaaggat tggaatccga ccgctttcga cccgcagacc
     3361 gggcttcttt acatccaggc acacaacgtc tgcatgaccg atacaccgca caaggccaac
     3421 tacatcgcgg gcacgcccta tctcggagcc gatgtcacga tgttccccgg gccgggcggc
     3481 tgggagggcg cgctgatcgc ctgggatgtc aaagacgcgc gaccggtctg gacgctgcag
     3541 gagacgaagc tgccgctctt cggcggggtg ctcgccaccg gcggcaatct cgtgttctac
     3601 ggcacgttgg atggctggtt ccgggccgtc gatgcgcgca ccggtcagat cctgtggcaa
     3661 ttcaagacca gctccggaat cgtcggggag ccgatgacgt ttgtcggacc ggacggaaag
     3721 cagtacatcg ccgtgtactc gggtatcggc ggatggcttc cggccgccgc gctgccgagc
     3781 gtgtcggaaa ccgatccgac cgccgccctc ggcaccgtcg gcgcggtgcc ggatatcaag
     3841 aagtatacga gtccgggagg cgtcttgtat gtgtttgcat tgtaggcggc cgcggctatt
     3901 gcggcagcgt acgaggaggc ctcagtgatg ctcaggctgt tcttgattac cctcgcgggg
     3961 cttatcccgc tggggacgag cggctgctcg gcatcggatc cgccgccgcc gaatgccgcc
     4021 gcgcctgccg tcgctgccga gacggctgca gcgacgccgg cggcgcaact tcccggaacg
     4081 cccgcccatt cggcgggcgg cacggtcccg ccggcgcttg ctcccgtcgg acccattccg
     4141 ggcccggaga tcgcgggcga ggatc
//
LOCUS       DATAVD010001614        22097 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1270012, whole genome shotgun sequence.
ACCESSION   DATAVD010001614 DATAVD010000000
VERSION     DATAVD010001614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 22097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22097
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1270012"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1508
                     /locus_tag="VHX39_30925"
     CDS             <1..1508
                     /locus_tag="VHX39_30925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEX3995606.1"
                     /translation="GDVTVGECIGWLAENPEVDVIAVYAEGIREAPGLIAALEVARAA
                     KKPVVMQKVGRSELGGKAAKSHTASIAGDDAVTEAVMAEFGVYRARNSEEMLDIAHTA
                     TRKIYPVKNSLGVITVSGGAGVLISDVAETLGLAMPEMPMEAQQKLRALVPFCAPRNP
                     VDATAQVSNDVTLVKTFTESMVRDGGYASVLGFFSMTASSRRWPSIREQLNAVRVENP
                     DRLYVLSVIVPPERRDELEADGWVVHEDPTRAVTAIDAMGRFGAGFAAVDAGKAPVVP
                     PVTLPAAAPSEAEAKRLLAGAGIASAPEAACATVDEAVAAAGRFGFPVVMKILSPDIV
                     HKSEIGGVLLDIADADAVRSGFALLLERAKTAAPGARIEGVLVAKQLKGGVECILGIH
                     RDPVFGPMAMFGLGGIFVEVLKDVVFRRCPFGPDTAEAMIRSIKGAPLLLGARGRKKA
                     DVKALAEMLSRLSAFAAAAGDRLQSIDLNPVLAMPEGEGAFAVDAVIEVSA"
     gene            complement(1498..2493)
                     /locus_tag="VHX39_30930"
     CDS             complement(1498..2493)
                     /locus_tag="VHX39_30930"
                     /inference="COORDINATES: protein motif:HMM:NF014305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995607.1"
                     /translation="MEDDTALTHLLATLDTLSHIARMMHPARLTDLVSELPDAPAQSA
                     ASEQIRFAATYASQACAGLRAAPGAENPMLEAYRAMRQYSRALEALIPLAETEPLVNR
                     YFLEPRYRDDPGLRLKPPHPDSGLYHSDNQTTERGGFSVYVPPRYDPADPTPIIFALH
                     GGSGHGRLFLTNWIAESRSRSMIVVAPTAIGSTWSLMDPEIDAENLNSVLVRVKDRWN
                     VDPNHMLLSGMSDGGTFTLLSGLAESAPFTHLAPVAASFHPMLLAMAEPQRLTGLPIH
                     LTHGAQDWMFPVSMARTAHRMLAAAGAAITYREIADLSHAYPRDGQGEVLDWFTR"
     gene            2551..3822
                     /locus_tag="VHX39_30935"
     CDS             2551..3822
                     /locus_tag="VHX39_30935"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX3995608.1"
                     /translation="MIGDTRTRLLALWDHLGLRAAHVATQMAADIAGIVQASPDRLGG
                     IVLCVPARLDPAPFTGVADRVVLVSGQYGLTAAMRLPGATRVVLAGYDAPGWADVVAD
                     RTDEIVAALSALPDLPVVRLPQGDGTVAGISYSVRGEGPPLVLLPFFLAPSQWEPALA
                     ALAERFTVIVLGGRHLGGIAALEDRAAGRSYRALVSSLWDAMAIGTGDTVLDVGCGSG
                     ALDRLLAPRLVDGGIIATDVNRFLLREAALLAEGLAITFQAANAESLPFDDGTFDAAF
                     SVTVLEECDADQALRELFRVVKPGGRVGVIVRAIDLPQWWNLNLPATLKQKVEVPPQS
                     VGSRGLADASLYPRMRAAGFETLHCFPSLVTFDNPDGPIWRYRVDHVLSLLSDTELVL
                     WREATEAARARGLLFMANPMHCAVGIKPDPG"
     gene            complement(3803..4636)
                     /locus_tag="VHX39_30940"
     CDS             complement(3803..4636)
                     /locus_tag="VHX39_30940"
                     /inference="COORDINATES: protein motif:HMM:NF015444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF296 domain-containing protein"
                     /protein_id="HEX3995609.1"
                     /translation="MQATRSLQQPGPTHPSRIDAFAGTPHSLRFVLKPGDTLNQAITA
                     PLVEAGFQSGTVTLRGTALCPFRYVMPGPADNASHVAYFSAPSAPAGVTRIEQANATF
                     GWAGEKPFIHCHAVWTEPDGSRRGGHILPYETIIAEPGEGIAWGFDGVRIDAKPDPET
                     NFTLFQPSGAGLGSGVVARIKPNQDILTALETIAQAHGITNAVVRGSLGSLIGARFTH
                     GGQVEDHATEVLVREGHIKDGKAALDLLVVDMQGHVHEGWLRHGENPVCITFDLILDR
                     A"
     gene            4709..5248
                     /gene="phnN"
                     /locus_tag="VHX39_30945"
     CDS             4709..5248
                     /gene="phnN"
                     /locus_tag="VHX39_30945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism
                     protein/1,5-bisphosphokinase (PRPP-forming) PhnN"
                     /protein_id="HEX3995610.1"
                     /translation="MLVLVVGPSGAGKDTVLGLARQALAGDTRFRFVRRVITRPADAG
                     GEDHEAVSEAEFTQRRFALAWSAHGLRYGIPLDVADDLARGRVVIANVSRGVIEEAAA
                     RFPVQVVEVTASAGILAQRLAARGRETAEDIAKRLARDVAIPRGVGVDKVVNDGTPEE
                     AASHFMTVLNRVASRVPPT"
     gene            complement(5214..5885)
                     /locus_tag="VHX39_30950"
     CDS             complement(5214..5885)
                     /locus_tag="VHX39_30950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1045 domain-containing protein"
                     /protein_id="HEX3995611.1"
                     /translation="MRVALYYAPSPDDPLTPLSSAWLGRDPVTNADVPQPAVENIAAI
                     TAEPRSYGFHATLKPPMRMADGTKWNDFLGAIEATAATIAPFELPPLAVADLHGFLAL
                     RETVSCAPLQALADACVERLDQFRKPPSEDELARRRRAKLSPEQDAMLVRWGYPYVFG
                     TWFFHMTLTRRLSGTEKSAVLPAAEHWFAPALAVSRHVEDICVFTQSSAGVAFTLAGR
                     VKLLG"
     gene            complement(5885..7024)
                     /locus_tag="VHX39_30955"
     CDS             complement(5885..7024)
                     /locus_tag="VHX39_30955"
                     /EC_number="3.6.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0019700 - organic phosphonate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate diphosphatase"
                     /protein_id="HEX3995612.1"
                     /translation="MNPETILTNAILVLPDETIPGTIVMHGRVIADIQAGPSAVARAI
                     DVDGDTIIPGAVDVHTDNLERQVQPRSLARWPSRSAMVAHDAQCAAAGVTTVLDALCL
                     GDLGFDKERIKTFRDGVVDLDALTEAGLLKADHFLHLRCEIPALDMLELFDPVADHPL
                     VRMISLMDHSPGVGQYANMDFYRKLRRQGGLDEVTVDRRIKEMQDQRARLRDPNRKAL
                     LERVRGTTIALASHDDRTEAEIAENAADGIKISEFPVSMEAALAAKRAGMTVIAGAPN
                     IVRGGSHSGNVNAVDLLRAGAVDAFASDYVPPSLIEAVFQCAREEAISLSDAVAMISD
                     HPARLSGLPDRGRLEAGMRADLVRVRLHGTLPIVRQVWRTGERVI"
     gene            complement(7021..7722)
                     /gene="phnL"
                     /locus_tag="VHX39_30960"
     CDS             complement(7021..7722)
                     /gene="phnL"
                     /locus_tag="VHX39_30960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018835 - carbon phosphorus lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnL"
                     /protein_id="HEX3995613.1"
                     /translation="MNTVMLQTRALAKSFTLHLRGGLRMPVLSGVDLDVGAGECVVLS
                     GPSGTGKSTLMRSLYGNYRAESGTILIRHAGEMVDIATADPRTILAVRHETLGYVSQF
                     LRVVPRVSALDVVAEVLLIRGVDQDAAREAARTLLLRLNIPSRLHAIPPATFSGGEQQ
                     RVNLARGFIANHPILLLDEPTASLDAENRAVVVRMVQDAKAKGTAIVAICHDADVRDV
                     IADRLFTMSPYQDAA"
     gene            complement(7719..8495)
                     /gene="phnK"
                     /locus_tag="VHX39_30965"
     CDS             complement(7719..8495)
                     /gene="phnK"
                     /locus_tag="VHX39_30965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018835 - carbon phosphorus lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnK"
                     /protein_id="HEX3995614.1"
                     /translation="MTEPTLLSGRGLNLTFGAIPALVDVEVDLWPGEMLAIVGESGSG
                     KTTLLNVLSGRLAPDKGVVWYRDPNDRLHDVHAMPAPVLRTLHRSDWGFVHQDPRQNL
                     RMNVSAGGNVGERLMAQGARHYGDIRTAALDWLEQVEIDAGRIDDLPRTFSGGMLQRL
                     QIARTLVTHPRLVFMDEPTGGLDVSVQARLLDLIRSLVTRLRIAVVLVTHDIAVARLL
                     AHRIAVMQRGRIVETGLTDQVLDDPRHPYTQLLVSSVLNA"
     gene            complement(8492..9358)
                     /locus_tag="VHX39_30970"
     CDS             complement(8492..9358)
                     /locus_tag="VHX39_30970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate 5-phosphate
                     C-P-lyase PhnJ"
                     /protein_id="HEX3995615.1"
                     /translation="MKGYNFAYLDEQTKRMIRRGLLKAVAVPGHQVPFGSREMPLPYG
                     WGTGGIQVTASILGAGDVLKVIDQGADDTTNAVSIRRFFARTAGVATTTATAEATVIQ
                     TRHRIPEKQLREDQIIVYQVPQPEPLFRLESSRVETKRMHGLSDYGLMHVKLYEDISR
                     FGQISISYDYPVMVNERYLMSPSPIPAFDNPKMDMMPALQLFGAGREKRIYAIPPWTR
                     VRSLDFDDHPFRTINAPHPCGLCGAVDSYLDEVVMDNHGGRLFVCSDTDHCAERRAAG
                     HVGTDGFREAAE"
     gene            complement(9355..10422)
                     /locus_tag="VHX39_30975"
     CDS             complement(9355..10422)
                     /locus_tag="VHX39_30975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-phosphorus lyase complex subunit PhnI"
                     /protein_id="HEX3995616.1"
                     /translation="MAYVAVKGGEQAIDNAHAWLARERRGDTVHPVLSVAQIEEQLGR
                     SVDRVMAEGSLYDRELAALAIKQAQGDLIEAAFLLRAYRTTMPRFAHSNPVETALMRI
                     ERRVSAVFKDLPGGQVLGPTYDYTHRLLDFDLREDGKNSSDPASPPVATMEAMPRVPD
                     ILGNEGLLESDARTEQEPGDLTREPLSFPAGRDVRLQALARGDEGFILGLGYSTQRGY
                     GGSHPFAGEIRMGEVSVEIEPAELGFAIDIGDLVLTECQMVNQFKGSKTVPPQFTRGY
                     GLIFGFGERKAMSMALVDRAMRAGELGEDVTAPAQNVEFVLYHSDNIEATGFVEHLKL
                     PHYVDFQSELQNVRRMRESVE"
     gene            complement(10425..10997)
                     /gene="phnH"
                     /locus_tag="VHX39_30980"
     CDS             complement(10425..10997)
                     /gene="phnH"
                     /locus_tag="VHX39_30980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnH"
                     /protein_id="HEX3995617.1"
                     /translation="MSNELSPGFADSVADAQSCFRSVLNAMARPGHLHATGGVSAPHP
                     LCDAAAAVLLTLADHETPLWLDPAAVESSVWITFHTGAPMTSAAQAMFVMALSLPDLT
                     GLSVGTDEMPETSATVILQVASLTTGQRYVLEGPGLREPRVVAIDGLPADFVAIWQRN
                     HALYPLGIDLILCAGNQLTALPRSVSIKDA"
     gene            complement(10994..11461)
                     /gene="phnG"
                     /locus_tag="VHX39_30985"
     CDS             complement(10994..11461)
                     /gene="phnG"
                     /locus_tag="VHX39_30985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015716 - organic phosphonate transport
                     [Evidence IEA];
                     GO_process: GO:0019634 - organic phosphonate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnG"
                     /protein_id="HEX3995618.1"
                     /translation="MNDSLRSTLPDLARRRWMAVLARAKAERIAGLLGDCGDLPPHTI
                     IRGPEGGLVMVRGRAGGGGSAFNLGEMTVTRCTVRPKTGFVGHAYVAGREERRAELAA
                     LVDALMQDQNRAADIEARVIGPLERQQMERRVERASNAAATRVQFFAMQTMRT"
     gene            11563..12321
                     /gene="phnF"
                     /locus_tag="VHX39_30990"
     CDS             11563..12321
                     /gene="phnF"
                     /locus_tag="VHX39_30990"
                     /inference="COORDINATES: protein motif:HMM:TIGR02325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0015716 - organic phosphonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism transcriptional regulator
                     PhnF"
                     /protein_id="HEX3995619.1"
                     /translation="MNAPADMDDQATYPVQRQDGVALWRQIFVRLQSDIASGGLKPGT
                     RLPTEAELSAQFGVNRHTVRRALEELSRDGLVRVEQGRGSFVAEDVLDYNVEARTRFS
                     EWIRKHNKEPSGIIRQLREAPADQRVAAGLGVRGGSRVVVLERLGFADDRPVSLTRHY
                     FPAQRLKGMLQALQATPRITEALRSVGVDDYLRLQTRVTARLPTQTEAELLRMARNRP
                     VLITENVNVDRGGTIVEFATGCYPTPRVQIVFEP"
     gene            12334..13470
                     /locus_tag="VHX39_30995"
     CDS             12334..13470
                     /locus_tag="VHX39_30995"
                     /inference="COORDINATES: protein motif:HMM:NF011987.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate diphosphatase"
                     /protein_id="HEX3995620.1"
                     /translation="MRVTGGTVLLASDGLVRMDLVLANGRVERIGGSGGGMSFDASGL
                     LVLPGIVDLHGDAFERQIQPRPGVDFPVDLALRDTESQLLANGITTAFHGVTLSWEPG
                     LRSLAAWKALLAGLDAGSWTCDMRVHLRWEAYNLDALDTAIADIEAGRVHLLAFNDHT
                     PSILKKLKDPVEGAKYSGRAGMKMEAFRAMADVVASRAEAVPAGLDRIAAAARAAGLP
                     MASHDDDSIAVRNEYRARGAAICEFPMAEAVGRAAVETGDFVVMGCPNVVRGGSHLGW
                     ASAARLAEAGICTVLTSDYYYPAMMRAAFVLAERGVLDLPQSWRLISENPARAGGLTD
                     RGVIEAGKRADLVLVDPATSRTVATIAEGRVAFITAEGSKRLAA"
     gene            complement(13531..14118)
                     /locus_tag="VHX39_31000"
     CDS             complement(13531..14118)
                     /locus_tag="VHX39_31000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995621.1"
                     /translation="MTEESSLQLLDHQLADDELNWIKGVHTDFTTARAGFAGQKSAFN
                     PKEALREVLGRKEHMLKVPMDLSGDGPWRYGRNNHDRSVACVFLKKIELHKHAKSRTD
                     QFPMYVVGEADAFSLGDDSRPVLTAVESGSHFHNSPGAPHAFLPKVGQKTNDDWEIAF
                     IAITPRNLKEDTQKVSEETRVAYKQVVGYEAPLGL"
     gene            complement(14181..15575)
                     /locus_tag="VHX39_31005"
     CDS             complement(14181..15575)
                     /locus_tag="VHX39_31005"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX3995622.1"
                     /translation="MSLSRDFAAFVANLRYEDLPAAVVDRAKGVVLQGLISALVAHDM
                     PASRQALALMQDEEAGGGGVATALCSGARLTKAGAAFVNAEMLLAGGKWDTFRMLTHP
                     GTAILPAALVAAEMTGCSGRQFLTGVVAAYEVMERMASEFIPTVMSRGFHAGPVFGIF
                     GAAIAAAKIEGLNADQINSAIAQCVNLAAGNLEGARSGGRSLREGGAVRNALLAVAMA
                     RHGTPGGETALEGDAGFYHAYIGNNHGDLRYSFTGRNRVSLADITKDMGRTWVFLETL
                     YRIYSTAGFNIAHVDVTGRLCEEHGLTYADIDRIEAVVNWFETEYPSPAFPTPGSDGQ
                     ARVGATQYFTAYGAVTRGYPLLRGAQPGPGESDPPEVLELMHRVTLIPMVRRTLFGPR
                     ITIFTKDGRTLTREGTGREFIWDFEEHVRRMQSVRSGLAIPAFQYDALVEACRALDMV
                     DGAGAKLVSLTVPG"
     gene            complement(15624..16889)
                     /locus_tag="VHX39_31010"
     CDS             complement(15624..16889)
                     /locus_tag="VHX39_31010"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016813 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear
                     amidines [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/carbamoylase family amidase"
                     /protein_id="HEX3995623.1"
                     /translation="MTFATDLFEALHASGWDGQGITRDTYGVGESAALDIIEHAARAH
                     GLDTERDAGANLVVTLTGREPELPFLACGSHLDSVPQGGNFDGAAGVIAGLAALVRMR
                     AEGVVPRRRIRVYGLRGEESAAFGRSYIGSSALLGVLPAADLDLRHAVSGETLRDRMR
                     AVGASVDRIERGDVLLPPASVAAWLELHIEQGPVLVAREMPVAIVTGIRGNIRHRSVE
                     CIGEAGHSGAVPRSLRHDTVFAVAELLTLLDHAWQSFLTSGSDLVVTAGVLGTEPAEH
                     AIARIPGRMHFSFEARSESQSTLDRYYALFLAACRRIEAERGVRFVLGPPLHTAPAVM
                     DRGWVETLRDVVRRLDLPDQPMASGAGHDAAVFANAGVPSAMIFIRNEHGSHNPLEAM
                     RMEDFDLGAEVLRLALAKGSEFVSPAGGV"
     gene            complement(16886..17824)
                     /locus_tag="VHX39_31015"
     CDS             complement(16886..17824)
                     /locus_tag="VHX39_31015"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HEX3995624.1"
                     /translation="MSVTIGGVRLANPVMPASGTFAEGLASVVDLNRLGALVTKTITR
                     ELRTGNPLPRVAEVDSGMLNAIGIPSKGVPYFLEHTLPLYRQWAPPLIVSISAPSAEH
                     FAHLAAEISVPGVTAIEANISCPNIEEDGKAFAMRAASTETVVRQLRAATSLPLWVKL
                     TPNTGEMAEVAKAAEAAGADAVVVANTILAMAIDLQTFKPRLGNVMGGLSGPAIKPIV
                     LRQVYQCARAVRIPVIGCGGISTAGDAAEYMLAGASAVQVGTATFLQPSAMTDVIDGL
                     ARFCELRGLASVTELIGAVKREEADEDDVAWAEPVP"
     gene            complement(17830..18636)
                     /locus_tag="VHX39_31020"
     CDS             complement(17830..18636)
                     /locus_tag="VHX39_31020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003619675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase electron transfer
                     subunit"
                     /protein_id="HEX3995625.1"
                     /translation="MNFCPSVVREHAEVLTNALVNSEYRHLTVACGPLAASAAPGQFF
                     QLLCPASSGSAPFFRRPMSLYGADPTKRRVEFLYKVTGAGTRGLAELVPGDRLDMMGP
                     LGRGFVLDPAWNSIVAVGRGAGLATLAPLAQAAQAMGIAVTAILSARRPDLVVSDALF
                     RSRGATVLTVTDTEGTSGPAHVEGLLRGLIGQGRCDAFFTCGSSRLLRVQQRLAREFS
                     LPGSVAMEQQMACGLGMCFCCVRDFNVGGEIVHKRVCWDGPVFDVLEALP"
     gene            complement(18633..19883)
                     /locus_tag="VHX39_31025"
     CDS             complement(18633..19883)
                     /locus_tag="VHX39_31025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995626.1"
                     /translation="MATYPDHALPATLPGSDDGVVTHEAWKALAGSAIGYAMDGFDLL
                     ILGFMLRIIAAALHLTPTQGASLVTATLVGAVIGGVGFGILSDRIGRVRVLTWTIVVF
                     AVFTGLCALAHGYWDLLFYRTMAGVGLGGEFGIGMALVAEAWPASKRARASSYVGLGW
                     QAGVLVAALLTPMLLPVIGWRGMFAVGLLPAIAAYFIRKDLHEPEVFVERTARAPAQS
                     SLRLLVADAETARISLGMVILCGVQNFGYYGVMIWLPSYLSSRFGFGLTQSATWTVVT
                     ILGMGVGIYGFGQAADRLGRKPAFITWMVGAAVMVVVYSRLTDPMELLVAGAVMGFFV
                     NGMLGGYGALMSELYPTAARATAQNVLFNIGRAIGGFGPVVVGAIAGKLGFQTAIALL
                     AVLYLIDIAAMWLLIPERKGRELA"
     gene            20004..20972
                     /locus_tag="VHX39_31030"
     CDS             20004..20972
                     /locus_tag="VHX39_31030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010514593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3995627.1"
                     /translation="MKPRHLRIHAAALHYFDAVRRSGSIRSAARRLNVASSAVNRQIL
                     NLEAEVGTQLFDRLPVGLKLTAAGEILAHHVITVLRDAERTESALDALHGLRAGAVEL
                     VTLEGLCHRIVPGAIAALASRAPKVSIGVDILATEDIPNAVANGDAHLGLAFEVRPRP
                     DLRRIAVARYRLGAVVTPVSPLAMKAAVTLNDCRDFPAILPKRNFANRNQLHPILFEA
                     GLSSSGRYEAGSIELMKELALRGLGVAFMTRVGLETELDSGRLVHVPLRRSRGPIYSE
                     LGLYARADTALPLAAELFADSIRDRMAASSDPDETVSVAVPLRGTS"
     gene            21042..22058
                     /locus_tag="VHX39_31035"
     CDS             21042..22058
                     /locus_tag="VHX39_31035"
                     /EC_number="3.5.1.49"
                     /inference="COORDINATES: protein motif:HMM:NF009803.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004328 - formamidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formamidase"
                     /protein_id="HEX3995628.1"
                     /translation="MNGLGGLNKSPNGVVIGLVQLKLPEIATRADIATQAAKIVAMVG
                     KAKRGMSTIDLVVFPEYALHGLSMDIRDEILCDLDGPEVAAFKAACVEHRVWGCFSIM
                     ERNPGGMPYNSGLIIDDTGRLALYYRKLHPWVPVEPWEPGDLGIPVITGPNGCKLSLI
                     ICHDGMFPEMAREAAYKGAEIMLRTAGYTPPVRAAWQFTNQSNAFCNLMVTASVCMCG
                     SDGTFDSMGEAMFCDFDGTIIAHGAQGRVDEIITAEVRPDLVREARAVWGVENNIYQF
                     GHRGYAAVKGGAGDCPYTYMRDLVAGQYRLPWEAAVQVTDGTGCGIAAPSRVYGVPAA
                     KAAE"
BASE COUNT         4147 a         6876 c         7113 g         3961 t
ORIGIN      
        1 agggcgacgt aacggtcggc gaatgcatcg gctggctggc ggagaacccc gaggtcgatg
       61 tgatcgccgt ttacgccgaa ggtatccggg aggcacccgg tctgattgcc gcactcgaag
      121 tcgccagggc agcgaaaaag cccgtggtca tgcagaaggt cggccgcagc gagctgggcg
      181 gcaaggcagc gaaatcgcat accgcgtcga tcgccggcga tgacgccgtg accgaagcgg
      241 tgatggcgga atttggagtg tatcgggcgc gcaacagtga ggagatgctg gatatcgcgc
      301 acacggcgac acggaagatc tatccggtca aaaattcgct tggtgtgatc acggtttccg
      361 gcggagccgg cgtgctgatc agcgacgtgg cggaaacgct cggcctggcg atgccggaaa
      421 tgccgatgga ggcacaacag aaactgcgcg ccctggtgcc gttctgtgcg ccgcgcaatc
      481 cggtggacgc cacagcgcag gtttcgaatg atgtgactct ggtaaagacg ttcaccgaat
      541 cgatggtgcg ggacgggggt tatgcctccg tgctgggatt cttcagcatg accgcgtcgt
      601 cgcgccgctg gccgtcgatc cgggagcagt tgaacgcggt gcgcgtcgaa aatccggatc
      661 gcctgtatgt gctgtcggtg atcgttccgc cggaaaggcg cgatgaactg gaagccgacg
      721 gctgggtggt gcatgaggat ccgacccggg cggtgacggc gatcgacgcg atgggccgct
      781 tcggtgccgg attcgccgct gttgacgccg gaaaggcgcc ggtcgttccg ccggtgacat
      841 tgccggcagc ggcgccctcg gaagcggagg ccaagcggtt gttggccggt gccgggattg
      901 cgtcagcgcc cgaggcggcc tgcgccacgg tcgatgaagc cgtcgccgcg gcgggccggt
      961 tcggtttccc ggtggtgatg aaaattctat cgccggacat cgtgcataaa tccgaaatcg
     1021 gtggcgtgct gctggatatc gccgatgctg atgcggtacg ttccggattc gcgttgcttt
     1081 tggagcgcgc caaaacagcg gcgcccggtg cgcgtataga aggtgttctg gtcgcgaaac
     1141 agctcaaggg cggcgtggag tgcattctgg gcattcaccg cgatccggtg ttcggcccga
     1201 tggcgatgtt cgggctgggc gggattttcg tcgaggtgct gaaggacgtc gtgttccgcc
     1261 gctgcccgtt cggacctgat accgcggaag cgatgatccg ctccatcaag ggcgcgccac
     1321 tgctgttggg tgcgcgtggc cgcaagaagg ccgacgtgaa ggcactggca gagatgctgt
     1381 cacggctttc ggccttcgct gctgcggcag gcgaccggtt gcaatcgatc gacctgaacc
     1441 cggttctggc gatgccggag ggcgagggtg cgttcgcggt ggacgcggtg atcgaggtca
     1501 gcgcgtaaac cagtccagca cctcgccttg gccgtctctg gggtaggcat gcgataggtc
     1561 ggcgatctcc cgataggtga tcgccgcgcc cgccgccgcc agcatgcgat gtgccgtgcg
     1621 ggccatgctg acgggaaaca tccagtcctg cgcaccgtga gtcaggtgga tcggcagccc
     1681 ggtcagccgt tgcggttccg ccatcgccaa tagcatcgga tggaacgacg cggccaccgg
     1741 tgccagatga gtgaacggcg cactctccgc aaggccgctg agcaaggtaa atgtgccccc
     1801 atcgctcatg ccgctcagca gcatgtggtt cggatcgacg ttccagcgat ctttcacccg
     1861 aaccagaacg ctgttgagat tttcggcgtc gatttcggga tccatcagcg accacgtgct
     1921 tccgatggcc gtgggcgcga ccacgatcat gctgcgcgac cgcgattcgg cgatccaatt
     1981 ggtgagaaac aggcggccgt gcccggaccc gccgtgcagc gcaaaaataa tgggtgtggg
     2041 atcggcagga tcgtaacgag gcgggacgta gacggaaaag ccgccacgtt cggtcgtttg
     2101 attgtccgag tggtagagac cagagtccgg gtgcggtggc ttaagccgca gacccgggtc
     2161 gtcgcgatac cgaggctcca gaaaatagcg gttgaccagt ggttcggttt ccgcgagcgg
     2221 gatcagcgct tccagtgcgc ggctgtattg ccgcatggcg cgataggctt ccagcattgg
     2281 gttctccgcg cccggtgccg cacgcaagcc ggcacaggct tgcgatgcgt atgtggcggc
     2341 gaaacgaatt tgctccgacg ctgcggattg tgccggcgca tcaggtagtt ccgataccag
     2401 atcggtgagc cgcgcggggt gcatcatcct ggcgatatgg ctcagcgtgt ccagcgtggc
     2461 cagcaaatgg gtcagcgcgg tgtcgtcctc catcggattg ccctttccat gccgtggttg
     2521 ttccatacag gcagagggag ccggatgcca atgatcgggg atacaaggac acgcctgctg
     2581 gcgctgtggg accatctggg gctgcgggcg gcgcatgtcg cgacgcagat ggcggccgac
     2641 atcgccggga tcgtgcaggc atcgccggac cgcttgggcg gcatcgttct gtgcgtgccg
     2701 gcccggttgg acccggctcc atttaccggc gtggcggacc gagtggtgct ggtatcggga
     2761 cagtatggat tgaccgcggc gatgcggttg cccggggcaa cgcgggtggt gctggcggga
     2821 tatgatgccc cgggatgggc cgatgttgtg gccgaccgga cggatgagat cgttgcggcg
     2881 ttgtcagcac tgcccgatct gcccgtcgtt cgcttgccgc aaggggatgg aacggtcgcg
     2941 gggatttcct actccgtccg aggcgaaggc ccgccgttgg tgctgctgcc attctttctg
     3001 gcgccgtcgc agtgggaacc ggccctggcc gcgctagcgg aacgatttac cgtgatcgtg
     3061 ctgggtgggc ggcatctcgg cgggatagca gcgctggaag accgggcggc gggtcgcagt
     3121 tatcgggcgc tggtaagctc gctgtgggat gcgatggcga ttggaaccgg cgataccgtg
     3181 ctggatgtcg gctgcggatc gggcgcgctg gatcgactgc tggcgcctcg attagttgat
     3241 ggtggcatca tcgcgaccga cgtcaaccgg tttctgctgc gcgaggcagc gttgctggcc
     3301 gaaggactgg cgatcacgtt ccaagcggcg aacgccgaat cgttgccgtt cgacgacggg
     3361 acattcgacg cggcattctc ggttacggta ttggaagagt gcgatgcgga ccaggcatta
     3421 cgggaattgt tccgtgtggt gaaaccgggc gggcgggttg gcgtgatcgt ccgagcgatc
     3481 gatttgccgc agtggtggaa cttgaacctg ccggctacgt tgaagcagaa agtcgaggtt
     3541 ccaccacaat cggttggatc acgagggctg gccgacgcct cactctaccc ccggatgcgg
     3601 gcggccgggt ttgaaacgtt gcattgcttt cccagtctgg tgacgttcga caatccggat
     3661 ggtccgatct ggcgctacag ggtagatcac gtcctgtcgc tactatccga taccgaactc
     3721 gtgctttggc gggaggcgac cgaggctgcc cgggcacgtg gcttgctgtt catggccaac
     3781 ccgatgcact gcgcggtcgg gatcaagccc gatccaggat aagatcgaag gtgatgcaca
     3841 cggggttctc gccgtgccgc agccagcctt catggacgtg gccttgcata tccacgacca
     3901 gcagatcgag tgccgccttg ccatctttga tgtggccttc acgcaccagg acctcggtcg
     3961 cgtgatcttc gacctgaccg ccatgggtga aacgggcacc gatcaggctg cccaggctgc
     4021 ctcgcacgac ggcgttggtg atcccatggg cctgcgcgat cgtttccagc gcggtcaaaa
     4081 tgtcctggtt gggttttatc cgggcgacca ctcccgaacc caatcccgca ccggacggct
     4141 ggaacaaggt gaaattggtt tcaggatccg gtttggcatc aatgcggaca ccgtcgaaac
     4201 cccaggcgat accttcaccg ggttcggcaa tgatggtttc gtacggaagg atgtgcccgc
     4261 cgcggcggct gccgtccggt tcggtccaga cggcgtggca gtggataaaa ggcttctccc
     4321 ctgcccaacc gaaagtggca ttggcttgtt caatccgtgt aacgcccgcg ggcgcggatg
     4381 gcgcggagaa atacgcgacg tgggacgcat tgtcggccgg gccgggcatt acgtagcgga
     4441 acggacacag cgcggtgccc ctcaacgtca cggtaccgga ctggaatccg gcttcgacca
     4501 gcggcgcagt gatcgcctgg ttcagcgtgt ccccaggctt caggacgaag cgtaggctgt
     4561 gcggtgtgcc cgcgaaggcg tcgatccggc tgggatgggt cggaccgggc tgttggagtg
     4621 accgggtcgc ctgcatgatg atgttcctga agggttgatc cgccggcacg ctaccggcaa
     4681 gttgccgctg gtcaatgggg gtggggcgat gcttgttctt gtggtcggac ccagcggcgc
     4741 cgggaaggac accgtgctcg gcctcgcccg tcaggcgctg gccggtgaca cgcgatttcg
     4801 cttcgtacgc cgggtgatca cccggcccgc cgacgctggt ggcgaagacc atgaggcagt
     4861 gtcagaagcc gagttcaccc agcggcggtt cgctctggcg tggtccgcgc acgggctgcg
     4921 gtacggcatt ccgctggatg ttgccgacga tctggcacgt ggcagagtgg tgatcgccaa
     4981 cgtttcgcgc ggcgtcatcg aggaagccgc ggccagattt ccggtgcagg tagtcgaagt
     5041 aacagcctcg gccgggattt tggcccagcg cctggccgcg cgcgggcgcg aaaccgccga
     5101 ggacatcgcg aaacgattgg ccagggacgt tgcgattccg aggggtgttg gtgtcgacaa
     5161 agtggtgaac gacggaacgc cagaggaagc ggcctcccac ttcatgacgg tacttaaccg
     5221 agtagcttca cgcgtcccgc caacgtgaaa gcgacgccgg ctgatgattg ggtgaataca
     5281 caaatgtctt ccacatggcg ggaaacggcg agggcgggcg caaaccagtg ttctgcggcc
     5341 ggcaggacgg cggatttctc cgtgccggac agacggcggg tcagcgtcat atgaaaaaac
     5401 caggtgccga acacgtacgg atagccccaa cgcaccagca tcgcatcctg ttcaggggat
     5461 agtttcgctc tgcgacggcg cgccagctca tcctcggacg gtggcttgcg gaattgatcg
     5521 agtcgttcca cacacgcgtc ggccagcgcc tgcaacggcg cgcacgaaac ggtttcccgc
     5581 aatgcaagaa agccatgtag atcggcgacc gccagtggcg gcagctcgaa cggggcgatc
     5641 gtcgcggcgg tagcctcgat ggctcccaga aaatcgttcc acttggtacc atcagccatc
     5701 cgcatcggcg gcttcagggt cgcgtggaac ccatagctgc gcggttcggc ggtgatcgcg
     5761 gcgatattct cgaccgcggg ctgcggcaca tccgcgttgg tgaccggatc gcgaccaagc
     5821 caagccgaac tcagtggcgt aagagggtcg tcgggcgagg gggcatagta aagcgcgacc
     5881 cgcatcagat cactctctca cccgtgcgcc agacctgccg gacgatcgga agcgtgccat
     5941 gaaggcgaac gcggacgagg tcggcacgca tcccggcttc caaccggccg cggtcgggta
     6001 gccccgacaa tcgggcagga tggtcagaga tcatggccac agcgtccgac aagctgatgg
     6061 cttcttcccg agcgcactgg aacacagcct cgatcaggct gggcggaacg tagtcggagg
     6121 cgaacgcgtc gacggcgccg gcacgtagca ggtcgacggc attgacattg ccggaatggg
     6181 atccaccccg aacaatgttg ggcgcgccgg cgataacggt catgccggct cgtttcgctg
     6241 ccagggcagc ctccatggac acaggaaatt cgctgatctt gatgccatcg gcagcatttt
     6301 cggcgatctc ggcctcggtc cggtcgtcat gactggccag cgcgatggtg gtgccgcgca
     6361 cgcgttccag cagcgccttg cgattggggt cacgcaaacg ggcccgctga tcctgcattt
     6421 ccttgatccg gcgatccacg gtgacctcat ccaggccgcc ctggcgacgc agtttacggt
     6481 agaaatccat attcgcgtat tggccgacgc cagggctgtg atccatcagg ctgatcatgc
     6541 ggaccagagg atggtcggca accggatcga acaattccag catatccagc gcgggaattt
     6601 cgcagcgcaa atgcaggaag tggtcagcct tcaacagtcc agcctcggtc agcgcgtcga
     6661 ggtcaacgac accatcccgg aacgttttga tccgctcctt gtcgaagcca agatcgccca
     6721 ggcacagcgc atccagcacg gtggtgacac cggccgcggc gcattgcgcg tcgtgcgcga
     6781 ccatggcgga gcgggacggc cagcgcgcga ggctgcgtgg ctgcacctgc cgttccagat
     6841 tatcggtatg gacatccact gcccccggaa taatcgtgtc cccgtcaaca tcaattgctc
     6901 gggctaccgc cgacgggccg gcctgaatgt cggcaataac ccggccgtgc atcacgatcg
     6961 tgccgggtat cgtttcatcc ggaaggacca gaatggcgtt ggtcaggatt gtctcggggt
     7021 tcatgcggca tcctggtaag gagacatggt gaacagccgg tcggcgatga cgtcacgaac
     7081 atcggcatcg tggcagatcg cgacaatcgc ggtccccttg gctttcgcat cctgcaccat
     7141 tcgaaccacg accgctcgat tttccgcatc cagagacgca gtcggctcat ccagcagaag
     7201 aatcgggtgg ttggcaatga aaccgcgtgc caggtttacc cgctgctgct cgccgccgga
     7261 gaaagtggcc ggcggaatgg catgcaggcg ggacgggatg ttaagcctca gcaacaacgt
     7321 ccgagctgcc tctcgcgcgg cgtcttggtc aacgcctcgg ataagaagca cttcagcaac
     7381 gacatccagt gcggaaaccc gagggacgac acgcaagaac tgactgacat aacccaaggt
     7441 ttcatggcgg accgccaata tcgttcgcgg atcggcggtt gcgatgtcaa ccatttcgcc
     7501 ggcatggcga atcaatatcg tgccggactc ggcacgataa ttgccataca ggctacgcat
     7561 caatgtggat ttgccggtgc cggacggacc agaaagaacg acgcattccc cagcaccgac
     7621 atcgagatcg acgccagaca gcacgggcat gcgcagcccg ccacgcaagt gcagcgtgaa
     7681 gcttttggcc aacgctcggg tttgcagcat cacggtgttc atgcgtttag caccgaactg
     7741 acgagcaact gggtataagg atgccgggga tcatccagga cctgatcagt caggccggtc
     7801 tccacgatcc ggccacgctg catcactgcg atccggtgcg ccagcaggcg ggcgaccgcg
     7861 atatcatggg tcaccagcac aacggcaatg cgcaagcgcg taacgagcga tcggatcagg
     7921 tccaaaagcc gagcctgcac ggaaacatcg aggccaccgg taggctcgtc catgaacacc
     7981 aaccgcggat gcgtgaccag cgtgcgggcg atctgcaacc gttgcagcat gccgccggag
     8041 aaagtgcgcg gcaggtcgtc gatacggccg gcgtcgattt ccacctgttc cagccaatcc
     8101 agcgcggcgg tgcggatgtc gccataatgc cgcgcccctt gcgccatcag ccgctcaccg
     8161 acattgccgc cggcgctcac attcatccgc aggttctgcc gcgggtcctg atgcacaaaa
     8221 ccccagtcgg agcgatgcag tgtccgaagc actggcgccg gcatggcgtg gacgtcgtgc
     8281 aagcggtcgt tgggatcccg ataccacacc acacctttgt ccggggccag gcgcccggac
     8341 aaaacgttca gcagagtggt cttaccagac ccggattcgc cgacgatcgc cagcatctca
     8401 cccggccaga gatcgacctc gacatcgacc aacgccggaa tggcaccaaa agtcaggttc
     8461 aaaccgcgac ccgacagcag agttggttcg gtcattccgc ggcttcccgg aacccgtccg
     8521 ttcccacatg gccggcggcg cgtcgttcgg cgcaatgatc ggtgtcggag cagacgaaca
     8581 gtcggccacc atgattatcc atgacaacct catccaggta cgaatcgacg gccccgcaca
     8641 gcccgcaagg atgtggcgcg ttgatggtcc ggaacggatg atcgtcgaaa tccagcgatc
     8701 tgacccgggt ccaaggggga atcgcataga tacgcttctc acgccccgct ccaaatagtt
     8761 gcagggctgg catcatatcc attttcggat tgtcaaaggc ggggattgga ctgggcgaca
     8821 tcagatagcg ttcgttcacc atcaccggat aatcgtagct gatggagatc tgaccaaacc
     8881 gcgagatatc ctcataaagt ttcacatgca tcagtccgta gtccgacagc ccgtgcatgc
     8941 gtttcgtttc aacccggctg gattccaggc ggaacagcgg ttcgggctgc gggacctgat
     9001 agacgataat ctgatcttcg cgaagctgct tctcaggaat ccgatgacgg gtctggatca
     9061 ccgtggcttc ggctgtagcc gtggtggtgg cgacgccggc cgtgcgggca aagaaccggc
     9121 gaatggatac ggcgttggtc gtgtcgtccg caccctggtc gataaccttc agcacgtcgc
     9181 cggcgcccaa aattgaggca gtcacctgaa ttccaccggt cccccaacca taaggcagcg
     9241 gcatttcgcg cgagccgaat ggaacctgat gacccgggac cgcaacggcc ttgagcaggc
     9301 cgcggcggat catgcgcttg gtctgctcgt ccaaataggc aaagttgtag cctttcattc
     9361 aacgctctcc cgcatgcggc ggacgttttg cagttcgctt tgaaaatcga cgtagtgagg
     9421 cagtttcaaa tgctcgacaa aacctgtcgc ctcaatattg tccgaatggt acaggacgaa
     9481 ctccacattc tgtgcggggg ccgtgacgtc ctcaccaagc tctccggcgc gcatggcgcg
     9541 gtcaaccagc gccatcgaca tggccttgcg ctcgccgaaa ccgaatatca ggccgtagcc
     9601 cctggtgaat tgcggcggaa cggttttgga tcctttgaac tggttgacca tttggcactc
     9661 ggtcagcacc aggtcgccaa tatcgatggc gaagcccagt tcggcgggtt cgatttcaac
     9721 tgaaacctca cccattcgga tttcgccggc gaaggggtgg ctgccgccgt agcctcgctg
     9781 ggtggaataa cccagcccca gaatgaaacc ttcgtcaccg cgcgccagtg cttgcagccg
     9841 gacatcgcga cccgcgggga agctcaaggg ctcgcgggtc aggtcaccag gttcctgttc
     9901 ggtccgcgca tccgattcaa gcaacccttc gttgcccaga atatccggta cgcgcggcat
     9961 cgcttccatc gtcgcaactg gtggcgatgc cggatcggaa gaatttttcc catcctccct
    10021 caggtcaaaa tccaacagcc ggtgcgtata gtcataggtt ggtccgagta cctgtccgcc
    10081 gggcaaatcc ttaaaaacgg cggagacgcg acgctcgatc cgcatcaacg cggtttcgac
    10141 aggattggaa tgggcaaacc gcggcatggt ggtgcgatag gctctaagga gaaatgccgc
    10201 ctcgatcagg tcgccttgtg cctgcttgat cgccaaggcg gcaagttcac ggtcgtacaa
    10261 tgagccctcg gccatcacgc gatcgaccga acggccgagt tgttcctcga tctgcgcaac
    10321 ggacaacaca ggatggaccg tgtcgccccg ccgctccctg gccagccagg catgggcgtt
    10381 gtcgatcgct tgctcaccac ctttgacagc gacataagcc atggtcaggc gtcctttatg
    10441 ctgacgctgc gcggcagtgc cgtcagctga ttgccggcgc acaagatcag gtcgatacca
    10501 agcggataca gcgcgtggtt ccgttgccag atggccacga aatccgcagg caacccatcg
    10561 atcgcgacga cccttggctc ccgcagaccg ggaccttcca acacgtaccg ctggcccgtc
    10621 gtcagggacg ccacttgcag gatgacggtg gcagatgtct ccggcatttc atcggtgccg
    10681 actgaaagac cggtcaaatc gggcagcgac agcgccatta cgaacattgc ctgcgcggcc
    10741 gacgtcatag gcgcgccggt atggaacgtg atccatacac tcgattcgac ggccgccggg
    10801 tccagccaca agggggtttc gtgatcggcc agggtcagca ataccgcggc cgcggcgtcg
    10861 cataacgggt gcggggcaga cacgccgcct gttgcatgca aatgccccgg acgcgccatg
    10921 gcattgagca ccgaccggaa gcatgattgt gcatcggcga cggaatccgc aaaaccgggg
    10981 gaaagttcgt tgctcatgtg cgcatcgtct gcatcgcgaa aaattgcaca cgtgtcgcgg
    11041 ccgcgttcga tgcccgctcg actctgcgtt ccatctgctg acgttccagc gggccgatca
    11101 ctcgtgcctc gatatcagcc gccctgtttt gatcctgcat caatgcgtcc accagcgcgg
    11161 caagctccgc acgccgttct tcccgcccgg ccacgtaggc atggccgaca aagccggtct
    11221 tgggtcgcac cgtgcatcgc gtcacggtca tttcccccag gttgaatgcc gaaccaccac
    11281 cgccggcgcg gccacgaacc atgaccaggc cgccctcggg gcctcgaatg atcgtgtgtg
    11341 gtggcagatc gccgcaatcg ccaagcaagc cggcaatccg ttccgccttg gcgcgggcca
    11401 gcacggccat ccagcggcgg cgggccaaat cggggagggt tgagcggagg ctatcgttca
    11461 tggccatctg atattgttta gatgtctaga cagctaggct tggtctccgc tatcgtcaac
    11521 catgaagtgc cactgaatgg ccttggattg gatgaaagat cgatgaacgc ccccgccgat
    11581 atggatgacc aggcgaccta tccggtgcag cggcaggatg gggttgcctt gtggcggcaa
    11641 atctttgtcc gacttcagag cgatattgct tcgggtggcc tgaagccggg cacacgcctg
    11701 ccgaccgagg cggagttgtc cgcacagttc ggcgtcaatc gccacaccgt acggcgggca
    11761 ttggaagaac tgtcccgcga tggtttggtg cgggtggagc aaggccgagg ttctttcgta
    11821 gccgaggacg ttctggacta taatgtcgag gccagaacgc ggttttcgga gtggatacga
    11881 aagcacaaca aagaaccgtc aggcattatc aggcagttgc gggaggctcc cgcggaccag
    11941 cgtgtcgctg ccggacttgg cgtgcgtggc ggcagccgag tggttgtgct ggagcgtctt
    12001 ggctttgccg atgaccggcc ggtcagcctg acgcggcatt acttcccggc ccaacggctg
    12061 aaaggaatgc tgcaagcgtt gcaagcgacg ccgcgcatca ccgaggcgtt gcggtccgtt
    12121 ggggtcgatg actatcttcg attgcagacc cgcgtgaccg cacggctgcc gacccagacc
    12181 gaggcggagt tgttgcgtat ggcacgtaac cgtcccgtgc tgatcacgga gaatgtcaat
    12241 gtcgatcgtg gtggcacgat cgtcgaattc gcgacggggt gctatcccac cccgcgcgtt
    12301 caaatcgttt tcgaaccata aaggttatag cctatgcgcg ttacgggtgg gactgtgctg
    12361 ctggcctccg atgggctggt gcggatggat ttggtgctcg caaatggccg ggtcgagcgg
    12421 atcggcggtt cgggtggtgg gatgtcgttc gacgcgtccg ggttgctggt gctgcccggc
    12481 atcgtcgatc tgcacgggga cgcgttcgag cggcagattc agccccgccc cggcgtggac
    12541 tttccagtcg atctggcctt acgcgacacc gaatcgcaat tattggcgaa cgggattacc
    12601 accgcctttc acggtgtcac gctgtcctgg gaaccaggat tgcgcagtct ggccgcgtgg
    12661 aaggcgctgc tggccggatt ggatgccggt tcatggacct gcgacatgcg ggtccatttg
    12721 cggtgggaag cgtacaatct cgacgcgctg gataccgcca ttgccgacat cgaagctgga
    12781 cgcgtgcatc tgctggcctt taacgatcac acgccatcga ttctgaagaa actcaaagac
    12841 cctgttgaag gcgcgaagta tagcggccga gcgggcatga agatggaggc gtttcgtgcg
    12901 atggcggatg tggttgcgtc gcgcgccgaa gcggttccgg cagggcttga tcggatcgcg
    12961 gcggcagcgc gcgcggccgg actgccgatg gcgagccatg acgacgacag tattgccgtt
    13021 cgcaatgaat atcgggcgcg tggggcagcg atctgtgaat ttccaatggc ggaagcggtt
    13081 ggacgggcag cggtcgagac cggcgacttc gttgtaatgg gatgccccaa cgtcgttcgc
    13141 ggcggatcac atctgggatg ggcctcggcg gctcggctgg cagaggcggg aatctgtacc
    13201 gttctgacat cggactatta ttatcccgcg atgatgcggg cggcattcgt cctggccgaa
    13261 cgtggcgtgc tggatctgcc gcagtcctgg cggttgattt cggaaaaccc ggcgcgagcg
    13321 ggggggctga cggatcgggg tgttattgaa gcgggaaagc gagccgattt ggtgctggtc
    13381 gaccccgcga cgtcccgaac agtggcgacg atcgcggagg gacgcgtggc gttcatcacg
    13441 gctgaaggaa gcaagcgcct ggcggcctga cgtcccaaaa ggcagccgtt tgcgcccccg
    13501 cctgcttgcg caaagcgggg cgcatcggtg tcacaaaccg agcggcgctt cgtatccgac
    13561 aacttgcttg taggctactc tggtttcctc ggaaactttc tgggtgtcct ccttcaggtt
    13621 ccggggcgtg attgcaatga aagcgatttc ccagtcgtcg ttggtcttct gacccacttt
    13681 gggcagaaat gcgtgcggtg cgcccggcga attgtggaaa tggctgcccg attccaccgc
    13741 cgttagaacg ggccgtgaat catcccccag ggaaaacgca tccgcctccc caaccacgta
    13801 catcggaaac tgatcggtcc gactcttcgc gtgcttatgc agttcgattt tcttcaggaa
    13861 cacgcaggcg accgaccgat catggttgtt tctgccatac ctccaggggc catcacccga
    13921 caggtccata ggaaccttaa gcatgtgttc ctttcggcca agtacctccc gcagggcttc
    13981 cttcggattg aacgcactct tctgcccggc aaatcctgct cgagccgtgg tgaaatctgt
    14041 gtggacgccc ttgatccaat tcagctcatc atccgccagt tggtgatcca gcaattgcag
    14101 acttgattct tcggtcatga ctgtcctctt attcttcaac aatccactac taccgggccg
    14161 cagccgaggc aaggccgccg ctaaccgggg accgtcagcg aaaccagctt cgccccggcg
    14221 ccgtcgacca tatccagcgc ccggcaggcc tcgaccagcg cgtcatattg aaaggccgga
    14281 atcgccagcc cggaccggac ggattgcatg cgtcgcacgt gctcctcgaa atcccagatg
    14341 aactcgcgac cggttccttc gcgcgtcaag gtgcgcccgt ccttggtgaa gatggtgatc
    14401 cgcggcccga acaatgtccg ccgcaccatc gggatcaggg taaccctgtg catcagctcc
    14461 aatacctctg gtgggtcgct ttcccccggg cccggctgtg cgccacgcag caacgggtag
    14521 ccacgggtga cggcaccata ggcggtgaag tattgtgtag cgcctacccg cgcctggccg
    14581 tcgctgcccg gtgtcgggaa ggccgggctg ggatattcgg tttcaaacca atttaccacg
    14641 gcttcgatac gatcgatgtc ggcataagtc aggccgtgct cctcgcaaag cctgccggta
    14701 acgtcgacat gggcgatgtt gaagccggcg gtggagtaga tacgatacaa ggtctccaga
    14761 aacacccagg tgcgacccat atctttcgtt atatcggcca aggatacccg gttgcggccg
    14821 gtgaaactat agcgcagatc gccatgattg ttgccaatgt aagcatggta gaagccggcg
    14881 tcgccttcca gggctgtttc accgccgggc gtcccatggc gagccatagc cacagctaac
    14941 agcgcattgc gcacggcgcc gccttcccgt aacgatcgcc cgccgctgcg tgcgccttcc
    15001 aggttgccgg ctgccaggtt cacgcattgg gcgatggcgc tgtttatctg gtcggcgttc
    15061 aggccttcga tcttcgcggc cgcgatcgcc gcgccgaaaa tcccgaagac cggcccggca
    15121 tggaagccgc gcgacatcac ggtggggatg aattcggatg ccatccgttc catgacctca
    15181 tacgccgcaa cgacaccggt caggaattgt ctccccgaac atccggtcat ttcggcagcg
    15241 accagggcgg cgggcaggat ggcggttccg ggatgggtca gcatgcggaa cgtgtcccat
    15301 ttaccgcccg ccagcagcat ctcggcgttg acaaaggccg caccagcctt ggtcagcctg
    15361 gcgccgctgc acaatgcggt cgccacaccg ccgccgccgg cctcctcgtc ttgcatcaac
    15421 gccagtgcct gccggctggc gggcatatcg tgtgccacca gggccgagat caaaccttgc
    15481 aaaacaacgc ccttggctcg gtcgacgacc gccgccggca gatcctcata acgcagattg
    15541 gcgacgaatg ccgcgaagtc ccggctgagt gacatggttg ctcgttcccc cttgaagata
    15601 ccgaaacctt cacgggtgga aatttatacg ccgcccgccg gcgacacaaa ttccgaaccc
    15661 ttggcaaggg ccaaacgcag cacctctgcc ccaagatcga aatcctccat ccgcatcgcc
    15721 tcaagcggat tgtgcgagcc atgttcgttg cgtatgaaaa tcatcgcgct gggcacaccg
    15781 gcgttcgcga acacggccgc gtcgtgtccg gccccgctcg ccatcggctg gtcgggcaag
    15841 tcaagacgcc gcaccacatc acgcaacgtc tccacccagc ctcggtccat cacggcgggt
    15901 gccgtgtgca agggcggccc cagcacgaac cgcaccccgc gctcagcttc gatgcgtcgg
    15961 catgccgcca ggaacaacgc gtaataccgg tccagcgtgg actgtgactc gctgcgtgcc
    16021 tcgaatgaga aatgcatccg gccgggaatg cgggcgatcg cgtgctccgc cggttcggtg
    16081 cccagaaccc cggcggtgac gacaaggtcg ctgccggagg tcaggaacga ttgccaggcg
    16141 tggtccagca acgtcagcaa ctcggcgacg gcaaaaaccg tgtcgtggcg caggcttctg
    16201 ggcacggcgc cggaatgccc tgcctcgccg atgcactcga ccgagcgatg acggatattg
    16261 ccacgaatgc cggtcacgat cgcgaccggc atctcccgcg cgaccagcac cggcccctgt
    16321 tcgatatgca gttccagcca ggccgccacg gatgccggag gcaacagcac atcgcctcgc
    16381 tcgatccggt cgaccgaagc gccaaccgcc cgcatccgat cgcgcaacgt ctccccgctg
    16441 accgcgtgac gcaaatccag gtcggcggcc ggcagcacgc cgagcaatgc ggaagacccg
    16501 atatacgacc ggccaaaagc ggcgctttcc tcgccgcgca gaccatagac acggatcctc
    16561 cgccgcggca cgacgccttc cgcgcgcatc cgcaccaggg cggccaatcc ggcgatcaca
    16621 cccgccgctc cgtcgaaatt gccgccttgc ggcaccgaat ccagatgcga accgcaggcc
    16681 agaaacggca attccggctc ccgcccggtc aacgtaacga ccagattggc gcccgcgtcc
    16741 cgttcggtat ccagcccatg cgctcgggcg gcgtgttcga tgatgtccag cgccgcgctt
    16801 tcgcccacgc cgtaagtatc gcgcgtgatg ccctggccgt cccatcccga cgcatgcagt
    16861 gcctcgaaca ggtccgttgc gaaggtcacg gtaccggctc cgcccacgcc acgtcgtcct
    16921 cgtccgcttc ttcgcgtttc accgccccga tcagttccgt gacgctggcc agtccgcgca
    16981 gttcgcagaa ccgggccagc ccgtcgatca catcggtcat ggcgctgggt tgcagaaacg
    17041 tcgcggtgcc gacctgcacc gcgcttgccc cggccagcat gtattccgcg gcatctcccg
    17101 ccgtggaaat gccgccgcag ccgataaccg gtatccgcac ggcccgagcg cactggtaga
    17161 cctggcgcag gacgatcggc ttgatcgccg gacctgacaa accgcccatg acattgccca
    17221 gcctcggctt gaacgtttgc aaatcgatgg ccatcgccag aatggtgttg gccaccacca
    17281 cggcatcggc gccggccgcc tcggcggcct ttgccacttc cgccatttcg ccggtgttcg
    17341 gcgtcagctt cacccacagc ggcagcgacg ttgccgcccg caattgccgc accacggttt
    17401 cggtcgaggc agcccgcatc gcgaacgcct tgccgtcttc ctcgatgttc gggcaggaga
    17461 tgttggcctc gatcgccgtg acacccggca cgctgatctc cgccgccaga tgggcgaaat
    17521 gttcggcgga cggggccgag atcgacacga tcagcggcgg cgcccattgc cgatacagcg
    17581 gcaatgtatg ttccaggaaa tacggcacgc ctttcgacgg gatgccgatg gcattcaaca
    17641 tgccgctgtc cacctcggcg acgcggggca ggggattgcc cgtcctcagt tcccgcgtga
    17701 tggtcttggt caccagggcg cccaggcggt tcaggtcgac gaccgaggcc aggccctcgg
    17761 cgaacgtgcc ggatgccggc atcaccgggt tcgccagcct gactccgccg atggtcaccg
    17821 acatgtcggt cacggcagtg cctccagaac gtcgaacacc ggtccgtccc agcagacccg
    17881 cttgtggacg atctcgccac cgacgttgaa atcacgcaca cagcagaagc acatgcccag
    17941 gccgcaagcc atctgctgct ccatggcgac gcttccgggc aggctgaact cgcgcgccag
    18001 ccgctgctgc acgcgcagca gccgggacga cccgcaggtg aagaacgcat cacagcgtcc
    18061 ctgtccgatc aggccgcgca gcaatccttc cacatgcgcg gggccgctgg tgccctcggt
    18121 gtcggtcact gtcagcaccg tcgccccgcg agaccgaaac agcgcatcgg ataccaccag
    18181 atcgggtcgc cgcgccgaca ggatggcggt aaccgcgatc cccatcgcct gggcagcctg
    18241 tgccagcgga gccagcgtgg cgagtccggc gcctcgcccg accgcgacga tgctgttcca
    18301 ggcggggtcg agcacgaagc cacgcccgag cgggcccatc atgtccaggc ggtcgccggg
    18361 aaccagttcg gcgaggccgc gcgtgccggc cccggtgact ttgtagagga attccacccg
    18421 gcgtttcgtc ggatcggcac cgtagaggct catcggccgg cgaaagaacg gggcgctacc
    18481 cgacgacgcc ggacaaagaa gctggaagaa ctgacccggc gcggccgagg cggcgagcgg
    18541 accgcaggcc accgtcagat gccggtattc gctgttgacc agggcgttgg tcaggacctc
    18601 agcgtgttcg cgaacaacac tgggacaaaa gttcatgcca gttcccgccc cttccgctcc
    18661 gggatcagca gccacatcgc agcgatgtcg atcaggtaaa gcacggccag cagggcgatc
    18721 gcggtctgaa atcccagctt tccggcgatc gcgccgacga cgacgggccc gaaaccgccg
    18781 atcgcccggc cgatgttgaa cagcacgttc tgcgcggtgg cccgggcggc tgtgggatac
    18841 aactcactca tcagggcgcc gtagcccccc agcatgccgt tgacgaagaa gcccatcacc
    18901 gcgccggcca ccagcaattc catcgggtcg gtcaacctgg aatagaccac gaccatcacg
    18961 gccgcgccca ccatccaggt gatgaacgcg ggcttgcggc ccaggcgatc cgccgcctgg
    19021 ccaaagccat aaatgcccac ccccatgcca agaatggtga ccaccgtcca ggtcgccgac
    19081 tgtgtcagcc caaagccgaa ccgcgacgac agatagctgg gcagccagat catcacgccg
    19141 tagtagccaa aattctgcac gccgcagagg atgaccatgc ccaggctgat gcgtgccgtt
    19201 tccgcatccg ccaccagcag ccgaagcgac gattgcgcgg gcgccctggc ggtgcgttcg
    19261 acgaagacct cgggttcgtg caggtccttc cggatgaaat aagcggcgat ggcgggcaag
    19321 aggccaaccg cgaacatgcc gcgccagccg atcaccggca gcagcatcgg cgtcagcaag
    19381 gccgcgacca acacaccggc ctgccagccg aggccgacat aagatgaggc acgcgcgcgt
    19441 ttggacgcgg gccaagcctc ggccaccagc gccatgccga tgccaaactc accgcccagc
    19501 ccgacgccgg ccatcgtgcg gtagaacagc aggtcccagt agccgtgcgc caatgcgcaa
    19561 agcccggtga agacggcgaa caccacgatg gtccaggtca gcacccgcac ccggccgatc
    19621 cggtcggata ggatcccgaa gccgacgccg ccgatcaccg caccgaccag cgtggcggtc
    19681 accagcgagg cgccctgggt cggggtaaga tgaagggcgg cggcgatgat ccgcaacatg
    19741 aagccaagga tcaacaggtc gaaaccgtcc atcgcgtagc cgatggcgga acccgcgagc
    19801 gccttccagg cctcatgcgt gacgacgcca tcatcggatc ccggcagcgt tgcgggcaag
    19861 gcatggtcgg gatacgttgc cacaggtgtt ctccctcatg tggtcgcgtg cgaagttgca
    19921 acgatgcgcg ttctcgatat gctcgaacaa gcagaagaaa tcgtgcatgg tgatgccgat
    19981 tcagcatcag gaccaggcga accgtgaaac cccggcatct gcgcatccat gctgctgcct
    20041 tgcactactt cgacgccgtc cgccgatccg gatcgatccg ctcggcggcc cggcggttga
    20101 acgtcgcgtc ctcggcggtg aaccgccaaa ttctcaatct ggaagccgag gtcgggacgc
    20161 aactgttcga ccgcctgcca gtgggcctga aactgacggc ggccggcgaa atcctggcac
    20221 accatgtcat taccgtgctg cgcgatgccg aacggaccga atcggcgctc gacgcgctgc
    20281 atggcctgcg cgccggcgcc gtcgaactgg tgacgctgga ggggctttgc catcgcatcg
    20341 tccccggggc gatcgccgcg ctggcgtcgc gcgcgccgaa ggtcagcatc ggggtcgata
    20401 tccttgccac cgaggacatt cccaatgcgg tggccaatgg agatgcgcat ctcggtctgg
    20461 ccttcgaggt ccgcccccgc cccgacctgc ggcgcatcgc ggtggctcga tatcggctgg
    20521 gtgcggtggt caccccggta tcgccactgg cgatgaaggc cgcggtaacg ctgaacgact
    20581 gccgtgattt tccggccatc ttgccgaagc ggaactttgc caaccgaaat cagttgcatc
    20641 cgatcctgtt cgaggcagga ctgagcagca gcggccgcta cgaggccggc tcgatcgagc
    20701 tgatgaagga actggcgctg cgcggacttg gcgtggcgtt catgacgcgg gtcgggctgg
    20761 agacggaact cgattccggc cgcctggtcc acgtcccgct gcggcgaagc cgggggccga
    20821 tctacagcga actcggtctg tatgcgcgag ccgacaccgc cctgcccctc gccgcggagc
    20881 tgttcgccga cagcatcagg gacaggatgg cggcgagcag cgacccggat gagactgttt
    20941 ccgttgccgt gccgttgcga ggaacatcgt aaccgccgcg tcaggtctgg ccggcatttt
    21001 gcattgtgcg gcggcgatca gtgagcgaat ggaggcagac aatgaacggc ttgggcgggc
    21061 tcaacaaatc accgaacggg gtcgtcatcg gactcgtgca actgaaattg cccgagatcg
    21121 ccacgcgcgc ggacatcgcg acccaggccg cgaagatcgt cgccatggtc ggcaaggcca
    21181 agcggggcat gagcacgatc gatctggtgg tgtttcccga atacgcactg cacggcctgt
    21241 cgatggacat ccgcgatgaa atcctgtgcg acctggacgg tccggaggtg gccgcgttca
    21301 aggccgcgtg cgtcgagcat cgggtatggg gatgcttctc catcatggag cgcaatcccg
    21361 gcggcatgcc ctataattcg ggcttgatca tcgacgacac cggccggctg gcgctgtatt
    21421 atcgcaagct gcatccttgg gtgccggtcg aaccgtggga acccggcgac cttggcattc
    21481 cggtcatcac cggccccaac ggctgcaaac tgtcgctgat catctgccac gacgggatgt
    21541 tccccgagat ggcccgagaa gccgcgtaca aaggcgccga gatcatgctg cgcaccgccg
    21601 gatacacccc gccggttcgc gccgcgtggc agttcaccaa tcagtccaat gcgttctgca
    21661 atctgatggt cacggcgagc gtgtgcatgt gcggctccga cggcacgttc gattcgatgg
    21721 gcgaggcgat gttctgcgac ttcgacggaa cgatcatcgc gcatggcgcg caggggcgcg
    21781 tggatgagat cattacggcg gaagtgcggc ccgatctggt acgggaagcc cgagcggtgt
    21841 ggggcgtgga gaacaatatt taccagttcg gccatcgcgg gtatgccgcg gtgaaggggg
    21901 gcgcgggcga ttgtccgtat acctacatgc gggatctcgt tgcagggcag tatcgcctgc
    21961 cgtgggaggc ggcggtgcag gtgacggacg gcaccggctg cggcatcgcg gcgccctcgc
    22021 gggtgtatgg cgttccggcg gcgaaggcgg cagaataggg ctctaacgcc gtgtgcgatc
    22081 atgcccgagg atgtccc
//
LOCUS       DATAVD010001615         2993 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2575967, whole genome shotgun sequence.
ACCESSION   DATAVD010001615 DATAVD010000000
VERSION     DATAVD010001615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2993
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2575967"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..780
                     /locus_tag="VHX39_31040"
     CDS             <1..780
                     /locus_tag="VHX39_31040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011252198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HEX3995629.1"
                     /translation="DVAVSALGDTTNLTGGTLLVTPLLAADGEVYAVAQGAVATGAIA
                     ARGAAASVSRGVPTAGQIANGAIVEKEVAFRLDKVGSTLRLGLRNPDLTTALRIAEEI
                     NRAIGPISKAIDPRTVLLEIAARNPVEVLGRIENLRIRPDNPATVIIDEASGTIVMGD
                     AVRISTVAIAQGNLTIRVTETPQVSQPGAFSGGTTTTVPRTQIQIDDGRDKKLGILES
                     GVTLRELVASLNALGVGPRDLISILESIKAAGALQANLQVR"
     gene            780..1091
                     /locus_tag="VHX39_31045"
     CDS             780..1091
                     /locus_tag="VHX39_31045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010503802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod-binding protein"
                     /protein_id="HEX3995630.1"
                     /translation="MHAIAPPPSHALTMPPLRPTAPTDPAKSWQAAHDFEAMALGEFL
                     KPMFDTVDSKHNLFSGGEAEKTWKPMLVDEIAKQIAVHGGLGLAGPIHDAMLRMQEGK
                     S"
     gene            1091..1477
                     /locus_tag="VHX39_31050"
     CDS             1091..1477
                     /locus_tag="VHX39_31050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995631.1"
                     /translation="MPRPLMPKTLVMAQRLADVLDRENDALRAMDLFRAVTLLPEKTA
                     AIADLTAADEEMAEHPHPDLASITARLDDLAQENRVLLERAIGVQQRVIGIVVRAAAS
                     VATAPNYGLHGRPVHLTSPMALSTRA"
     gene            1596..2324
                     /locus_tag="VHX39_31055"
     CDS             1596..2324
                     /locus_tag="VHX39_31055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RibD family protein"
                     /protein_id="HEX3995632.1"
                     /translation="MDHIVEASSRLDAEDALGPLFAPLRAPVPDGRSFVLGRIAQSLD
                     GYIATQDGESVWISGPDDLRHTHQLRALCDAVVVGATTVKADNPRLTTRLVDGPNPVR
                     VVLDPDRRLGPAYRVFHDGPETLLLCAPEMAAVDGPGRACVLTVPRGPCGLDIPAILA
                     LLRGRGLRRIFVEGGGVTVSRFLTAGALDRLHVTVAPLVMGGGVPAFPLPAVERLEDG
                     RRFAWTAHRIGGDILLDIPLVRSA"
     gene            2371..>2993
                     /locus_tag="VHX39_31060"
     CDS             2371..>2993
                     /locus_tag="VHX39_31060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase"
                     /protein_id="HEX3995633.1"
                     /translation="MTQSRAFWTIAPGQGELRAENLPDAAPGMVQIRALASGVSRGTE
                     ALVFAGRVPRSQFDAMRAPLMAGTFPFPVKYGYSVVGQSDDGGRVFVLHPHQDRFLAP
                     AAMCVPVPEAIPTHRAVLAANMETALNICWDAVPLAAERVLVIGAGVVGLLAASLMAR
                     FPATTVTVVDVNPARAAIARSLGCAFAVPDAAPDEQELIVHASASEAG"
BASE COUNT          509 a          902 c         1029 g          553 t
ORIGIN      
        1 gacgtcgccg tttccgcact gggcgatacc accaacctga ccggtggcac gttgctggtg
       61 acgcctttgc tggccgctga cggcgaggtt tatgccgtag cacagggcgc ggtcgcgacc
      121 ggcgccatcg cggcaagggg cgcggcagcc tcggtcagcc gcggcgtccc gacggcgggt
      181 cagatcgcca acggtgcgat cgtcgagaag gaggtcgcgt tccgcctcga taaggtgggt
      241 agcacgctgc gtctcggctt gcgcaatccc gacctgacga ccgcgttgcg gatcgcagaa
      301 gagatcaacc gcgccatcgg accgatcagc aaagccatcg acccgcgcac cgtgctgctg
      361 gaaatcgccg cccgtaatcc ggtcgaagta ctgggccgca tcgaaaacct gcgcatccga
      421 cccgacaatc cggccacggt tatcattgac gaggcgagcg gtacgatcgt catgggcgac
      481 gccgtgcgga tcagtacggt cgcaatcgct cagggtaatt tgacgatacg ggtgacagag
      541 acgccgcagg tttcccagcc tggcgcattt tccggtggca cgaccacgac ggtgccgcgc
      601 acacagatcc agatcgacga tggccgcgac aagaagctcg gcattctgga gagtggcgtt
      661 acgttgcgcg agctggttgc ctcgctgaat gcgcttggtg tggggccgcg cgatctgatt
      721 tcgatcctgg aatccatcaa ggcggccggc gccttgcagg ccaatctgca ggtgcgctga
      781 tgcacgccat cgcccccccg ccatcgcatg ctttgacgat gccgccgctg cgacccaccg
      841 cgccaacgga cccggcgaaa tcgtggcagg ccgcgcatga ctttgaggca atggcgctgg
      901 gggaatttct gaaaccgatg ttcgacaccg tcgacagcaa acacaacctg ttcagcggcg
      961 gtgaggccga gaagacctgg aagcccatgc tggtcgacga gattgccaag caaatcgcag
     1021 tccatggtgg gcttggcctg gcgggcccga tccatgacgc gatgcttcgc atgcaggaag
     1081 gaaaatcgtg atgccgagac ctttgatgcc gaaaaccttg gtaatggcgc aacgcctggc
     1141 cgatgtactg gatcgggaaa acgatgcgct gagggcgatg gatctgtttc gggcggtgac
     1201 cttgctgcct gagaagaccg ctgcgatcgc tgatctgacg gcagccgacg aagaaatggc
     1261 cgaacatccg catccggacc tcgcttcgat tacggctcgg ttggacgatc ttgcccagga
     1321 gaatcgggta ttgctggaac gggcgatcgg cgtgcagcag cgcgtgatcg gcatcgtggt
     1381 tcgcgccgcg gcctcggttg caacggcgcc aaattatgga ttgcacggcc ggccagtgca
     1441 cctgaccagc ccgatggcgc tgtcgacccg cgcgtaaatc cggcaatcgg gaacgaaaca
     1501 cgggaataaa tcttgccaca aagcgtaggt agaagtgagg cggttgcagc caggcgcaac
     1561 taccgtcacc tccggcggca tggtaagggc gcgtcatgga tcatatcgtc gaggcttcgt
     1621 cgcggttaga cgcagaggac gcgctcggcc cacttttcgc gccgttgcgg gcgccagtgc
     1681 cggatgggcg atcgtttgta ttgggacgca ttgcccaatc gctcgacggc tatatcgcga
     1741 cacaggacgg cgagtcggtt tggatcagcg ggccggacga tctgcgccac acgcaccagt
     1801 tgcgggcatt gtgcgacgct gtggtggtcg gggcgactac cgtcaaagcc gacaatcccc
     1861 ggctgacgac ccgcctggtc gatggcccga atccagtccg cgtcgtgctt gacccggatc
     1921 gtcgtctcgg cccggcgtac cgggtgtttc acgacggtcc ggaaacgttg ctgctgtgcg
     1981 cgcccgaaat ggcggccgtc gatggcccgg gaagagcctg cgtgttgacc gtgccgcgtg
     2041 gaccgtgcgg gctcgatatc ccggcaatcc tggcactgct gcgcgggcga ggcctgcgac
     2101 ggattttcgt cgagggcggc ggcgtgacgg tgtcacgctt tctgaccgca ggggcgctcg
     2161 accggctgca tgtcacggtg gcgcctttgg tgatgggcgg cggcgtgccg gcgtttcctc
     2221 tgccggcggt cgagcgtttg gaggatggac ggcgcttcgc ctggaccgcg caccggatcg
     2281 gcggcgatat cctgttggac attccgttgg tgcgctcggc gtgagtgatc gggctggtgc
     2341 gatcatgacg atccggactc gcagccacac gtgactcagt ctcgggcctt ttggacgatc
     2401 gcgcctggcc agggtgaact tcgcgccgag aatttgccgg atgcggcacc ggggatggtg
     2461 caaatccgtg cgcttgcctc aggcgtgtcc cgcggcacgg aggcgctggt ctttgccggc
     2521 cgcgtgcctc gttcgcagtt cgacgcgatg cgggcgccgt tgatggcggg aacgtttccg
     2581 ttcccggtca agtatggcta cagcgtcgtg ggtcaaagcg acgatggagg tcgggtgttt
     2641 gttctgcacc cgcaccagga caggttcctg gcgcctgcgg caatgtgcgt gccggtgccc
     2701 gaggcaattc caacgcaccg tgcagtgctg gccgcgaaca tggaaacggc actgaatatc
     2761 tgttgggacg cggtgccttt ggcggccgag cgcgtattgg tgattggcgc cggtgttgtc
     2821 gggctgttgg cggcctcatt gatggcacgc ttcccggcta ccacagtcac ggtcgtggat
     2881 gtgaacccgg cgcgggctgc catcgcccgg tcgctgggat gcgctttcgc cgtgcccgat
     2941 gcggccccgg acgagcagga actgattgtg cacgcgtccg cctccgaagc cgg
//
LOCUS       DATAVD010001616         7571 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1827045, whole genome shotgun sequence.
ACCESSION   DATAVD010001616 DATAVD010000000
VERSION     DATAVD010001616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7571
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1827045"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..444)
                     /locus_tag="VHX39_31065"
     CDS             complement(<1..444)
                     /locus_tag="VHX39_31065"
                     /inference="COORDINATES: protein motif:HMM:NF017638.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase 108 family protein"
                     /protein_id="HEX3995634.1"
                     /translation="MDDTFDACLEFTLAEEGGYSDHPTEPRLATNHGITLARLRRFLR
                     DPGLGPDDIRHIPCATVRALYLTDFWNRTRCDALPSGIDLMVFDHAVNAGPDRAGRAL
                     QLACGHRRADIDGAVGPDTLGRVELADRLTLVDALTAMQRTGYRQM"
     gene            complement(578..1360)
                     /locus_tag="VHX39_31070"
     CDS             complement(578..1360)
                     /locus_tag="VHX39_31070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3995635.1"
                     /translation="MEVRLDGRSAIITGASKGLGLAMATEFAASGADVAILARDPAGL
                     AEAKAHVSEGAKGKVATFQCDVSKAEEINKTVAAVMSAFGKVDILINNAGISRAMTVD
                     KITDEVWQDDLDLKLFAAIRLTRLVWPGMQERKWGRIINVLNLGAKAPRAGGAPTAVS
                     RAAGMALMKILSHEGAPHGILVNGMLVGLIDSDQHVRRHRTTAANVPYDEFRAKMGAN
                     VPIGRIGKAEEFAAMACFLCSDLAGFTTGTAINMDGGASPVV"
     gene            complement(1469..1930)
                     /locus_tag="VHX39_31075"
     CDS             complement(1469..1930)
                     /locus_tag="VHX39_31075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995636.1"
                     /translation="MKKFQTIIAGCFMAIALSGCVRNTVVIIAPQARPITPAVTCWSP
                     EDKEHHYLNPKEAYLTLLSPPELAKAQHVSGCAAIVFQLTREGKARNISLLRERPVGY
                     GYGAAIAEQTRRATFAPPASENDWYYRAESLTIGVGPIAAAPAAPVHSPFR"
     gene            complement(2308..3510)
                     /locus_tag="VHX39_31080"
     CDS             complement(2308..3510)
                     /locus_tag="VHX39_31080"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HEX3995637.1"
                     /translation="MRSAVIVSTARTPIGRAYRGAFNDTQAQALGGHVIAEAVKRAGV
                     APAEIDDVIMGSALQQGSQGFNVARQCALRAGLPDTVAGMSVDRQCASGMMAIATAAK
                     QILHDDMQITIGGGLESISLVQTNAVNRSRAQDPELMAHVPGLYMTMIETAELVADRY
                     KISREAQDEYALRSQQRTAAGQQSGAFDDEVVPMPSVMLATDRNTGETSAKSVTLGKD
                     EGNRPETNLEGLAALKPVFKDGQIVASGKFITAGNASQLSDGASAAVLMEEAEASRRG
                     LHPLGIYRGMAVAGCAPDEMGIGPVFAVPKLLQKHGLTVDDIDLWELNEAFACQVLYC
                     RDRLGIPHDKLNVNGGAISIGHPYGMSGARMVGHALIEGKRRGAKLVVVTMCVGGGMG
                     AAGLFEVA"
     gene            3494..6445
                     /locus_tag="VHX39_31085"
     CDS             3494..6445
                     /locus_tag="VHX39_31085"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HEX3995638.1"
                     /translation="MTALRMGVLPVYYGLPSDGAEMPPRPRVSYVNPVATAKDSVYVH
                     GVKRTLALPDSPAVVAGFGHAAILTPDGELLTLPTEEAAALLRSLPPPILVHAPATFR
                     RLGLRPGPAFDLLELFAFARPGEGAAPTPRGLAQALDHDDPPAKLDDQAALLPDLALQ
                     LLNHLARGRDTLVNKDAAGLAARMGRAGWGWSAYVMEALGQPDAAASIDALKVWRRLP
                     EFEEAAVPPPPSAFPVSEIEARTRLARILGQHAEQRPGQADYAGAATAAFLPRETKGD
                     PHLVLAEAGTGTGKTLGYLAPASVWAEKNKGPVWISTFTRHLQRQIETEVARIWPDPT
                     ERRANVVVRKGRENYLCLLNLEEAVNNAASGFLQNQLIPIGLIARWAAVTEDGDIQGG
                     DLPGWLGELHGAALIASLADRRGECIHGACTHYRRCFVEHTIRRARTAKLVVANHALV
                     MTQAAWGGLDDNAVPTRYVFDEGHHVFDAADSAFSATLSGLETSELRRWLLGGEGGRS
                     RARGLARRVEDLVADRPNLTTPLDAILQAARALPGIGWTARLTEEGPELEGVEPRQTN
                     PTEFFLRLVRRQVMARTSADEGPRARHNPYGTVECDVHPLNEPVAEAADRLARALGRL
                     ADPVETLRTRLLARAEDEAEDLDAATRLRIEAIARSLDRRAIQPLRAWRSMLTALAEP
                     DQEPGDRPGYVAFFRLDRRDGNRDFDVGLHRHWLDPTVPFALTLAAPAQGVLVTSATL
                     RDAGTGDPERSWTAAEARVGAPHLPSPAIRAAVASPFDYAAQTRVLVVTDLALGDIGQ
                     LASAFQALFVAAGGGALGLFTAINRLRAVQARIAPELEALNIPLYAQHVDAMGNATLV
                     DIFRAEEDSCLLGTDAMRDGVDVPGRALRLVVFEKVPWPRPDILHRERRVHLSHGDPK
                     GWDDRIARSRLRQAFGRLIRRASDRGVFVLLDRGAPSRLMSAFPEGVVVQRVGLAKAV
                     EATRGFLHDPA"
     gene            6449..7216
                     /locus_tag="VHX39_31090"
     CDS             6449..7216
                     /locus_tag="VHX39_31090"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX3995639.1"
                     /translation="MRLVTWNIRAGGGTRLAKITEALAAHQADVLVLTEYRSGAAGQS
                     LRAILRDEGYVWLSPVEPPGICNGVLIATRRKPGSIAHVTEHVPEPWRMLTVTIDRMR
                     VFGIYMPNLKAKIPYWEALIEASRPHCARHALAIGDFNTCRAFLDEPGATDRTAPFLD
                     KILAAGFQDVWRDRFPEGREFSWYSHRGNGFRVDHAFASQLLARRIREIRYSHVERAV
                     GVSDHSALLLDIDTITPPLHSRAGAQAVPDAVQILVR"
     gene            complement(7146..>7571)
                     /locus_tag="VHX39_31095"
     CDS             complement(7146..>7571)
                     /locus_tag="VHX39_31095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995640.1"
                     /translation="DKAEARIGDCLSAFTLPHWMMALAATGRENAARQMLEAMRDYAQ
                     GPGSNARLVGDVAIPVSQAVLAHGNGQYAQAVALMRPVLGEMYRLGGSHAQQDVLEQV
                     FLDAAMKAGLADDCAMLIERVSGRHPVPPARRRGYAMAA"
BASE COUNT         1328 a         2508 c         2340 g         1395 t
ORIGIN      
        1 catttggcgg tagcccgtgc gttgcatcgc agtcagcgca tcgaccagcg tcagccggtc
       61 cgccaactcg acacggccca gtgtatcggg tccgacggcg ccatcgatgt cggcgcggcg
      121 atggccgcag gcgagttgca aagcgcggcc ggcgcgatcg gggccagcgt tgaccgcgtg
      181 atcgaacacc atcaggtcga tccccgacgg gagtgcgtca cagcgggtgc ggttccagaa
      241 atccgtcaaa tacagcgcgc gcaccgtggc gcacgggatg tgcctgatat cgtccggccc
      301 aagcccagga tcgcggagga aacgacggag acgggcaagg gtgataccat ggttggtggc
      361 aaggcgaggc tcggttggat ggtcgctgta gccaccttcc tcggccagag tgaactcgag
      421 gcaggcatcg aatgtgtcgt ccatgaacgc cgcgctccca agaagaaatg tctaaggcag
      481 gagcgcggtc ttgtctctga tcggcaaatt cgcgtcaaac gctttccgag tgccacgccc
      541 ggagccatcc ccccgggcgc ggtcaatgcg gtccgtgtca aacgacgggc gacgcacctc
      601 catccatgtt gatcgccgtg ccggtggtaa agccggcaag atcggagcac aggaagcatg
      661 ccatcgcagc aaattcctcc gctttgccga tgcgtccgat cggcacgttc gcacccatct
      721 tcgctctgaa ttcgtcatac ggaacattcg cggcagtggt gcggtgtcgg cgcacgtgct
      781 gatcggagtc aatcagcccc accagcatgc cgttcaccag gatgccgtgc ggtgcgccct
      841 catgagacag gattttcatc agcgccattc cggcagcgcg cgacaccgct gtcggcgcgc
      901 cccccgccct gggcgctttc gccccgaggt tcagcacgtt gatgatgcgg ccccatttgc
      961 gctcctgcat gcccggccag accagccggg tcagccggat cgcagcgaac agcttcagat
     1021 cgaggtcgtc ctgccagacc tcgtcggtga tcttgtcgac cgtcatcgcc cgggaaatgc
     1081 cggcgttgtt gatcaggatg tcgactttgc cgaaagcgct catcactgcc gcgacggtct
     1141 tgttgatttc ctcggccttc gaaacatcgc actggaaggt cgcaactttg ccttttgcgc
     1201 cctccgacac atgcgctttg gcttcagcga gaccggccgg atcgcgcgcc aggatggcaa
     1261 catcggcgcc ggatgcggcg aattccgtcg ccatggcaag gccaagtcct ttgctggcgc
     1321 cggtaatgat ggcgctccgg ccgtcgaggc gaacttccat tggttttctc ccgaattatg
     1381 gatgcaccag tgtggagaac gggggcaggg tgggcaagcc catgccaggc tgcgggcgat
     1441 cttctgtcac agccggcatg ttaccgcgct accggaacgg tgagtgcacc ggcgccgcag
     1501 gagcggcggc gatcggaccc accccaatgg tcagagattc ggcgcgataa taccagtcgt
     1561 tctcagacgc cggtggcgcg aatgtggctc ttcgggtttg ttcagcgatg gccgccccgt
     1621 agccgtagcc aaccggacgc tcacgcagta aggaaatatt ccgtgcttta ccctcgcggg
     1681 tgagctggaa gacgatcgct gcacagccac tgacatgctg cgcctttgcg agctccggag
     1741 gggacaaaag cgtaaggtag gcttctttcg ggttcagata gtggtgctcc ttgtcctcgg
     1801 ggctccagca agtcactgct ggcgtaatgg gtcgcgcctg aggtgcgatg atgaccaccg
     1861 tgttccgcac gcaaccggat aaagcgattg ccatgaagca accggcaatg attgtctgaa
     1921 atttcttcat ctcaccgaaa ttccaatatg tttctataat gtcacgaacg acgcggccaa
     1981 aatgtcgggt ccgctccgcc acaactcagg cgccgatgca caggaacagt ggcagccaga
     2041 agcaggaatg cgccacgctc atgccatgcc ttctgggcgg cccgacagcg gaaaatcaaa
     2101 tcacctgacg tcgaatcttg cgaccttctg gcggcctgtc aaagtgcttc tgcaatgcgt
     2161 tccccgtgct ttctttctgg caacgttacc gcgcctcgcc tccattgcaa acgcatccgc
     2221 gcgtgcaaat tattgctatg gtcgacaacc tatggaggta aacctggcac ggtcctatgg
     2281 gccagacgcc cgaagcggtt aaatgcgtca cgccacctcg aacaatccag ccgctcccat
     2341 gcccccgcca acgcacattg taaccaccac cagcttcgcg ccacgccgct tgccctcgat
     2401 cagcgcgtgc ccgaccatcc gagcacccga catgccataa ggatgcccga tcgatatggc
     2461 cccgccgttg acgttcagtt tgtcgtgcgg aatgcccaac cgatcgcgac aatacagcac
     2521 ctgacaggca aatgcctcat tcagttccca caaatcgatg tcgtccaccg tcagtccatg
     2581 cttctgcaac aatttcggca cagcaaacac tggaccgatc cccatctcat ccggcgcaca
     2641 acccgccacc gccatgccgc ggtaaatgcc caacggatgc aagccgcggc gggacgcttc
     2701 ggcctcctcc atcagcaccg cggccgacgc gccatccgac aactgcgagg cgttgccggc
     2761 cgtaatgaac tttcccgacg cgacgatctg gccatccttg aacaccggct tcagtgctgc
     2821 gaggccctcc aggttggtct ccggccgatt gccttcatcc ttgcccaggg tgaccgattt
     2881 tgcggacgtt tcgccagtgt ttcgatcggt tgccagcatg accgacggca tcggcacgac
     2941 ctcatcgtcg aatgcgccgg actgctggcc tgcggcggtc cgctgctgcg aacgcaacgc
     3001 gtattcatcc tgtgcctcgc gcgaaatttt atagcgatcg gcaaccagtt ccgccgtctc
     3061 gatcatcgtc atgtaaagtc ccggcacatg tgccatcaac tcaggatcct gcgcgcgcga
     3121 acgattgact gcattggttt gcaccaacga tatcgactcc agcccgccgc cgattgtgat
     3181 ctgcatatcg tcgtgcagaa tctgtttcgc ggccgtggcg attgccatca tgccggaggc
     3241 gcactgacga tccaccgaca tgcccgccac tgtgtccggc agtccggcac gcaacgcgca
     3301 ctgccgcgcc acattgaacc cctgcgaacc ctgctgcagc gccgagccca tgatcacgtc
     3361 atcgatctcg gccggcgcga cgccggcgcg cttcacagcc tcggcgatca catgcccgcc
     3421 cagagcctgc gcctgggtat cgttgaacgc gcctcgatag gcacgaccga tcggcgtacg
     3481 ggcagtggag acgatgacgg cgctgcgcat gggcgtgctc ccggtttatt atggactgcc
     3541 aagtgatggc gcggaaatgc cgccgcgtcc acgggtgagc tacgttaatc cagtagcgac
     3601 ggcgaaagat tccgtctacg tccatggggt gaaacggacc cttgccctac ccgactcccc
     3661 cgcggttgtc gccggtttcg gccatgcggc cattctcacc cctgacggcg aattgctgac
     3721 actgcccacg gaagaggccg ccgccctcct acgcagcctt ccgccgccaa tcctggtcca
     3781 cgctccggcc accttccgcc gtcttggcct gcgtccgggt ccagccttcg acctgctgga
     3841 actgttcgct ttcgcacgcc caggggaggg cgccgcacca accccgcgag gcctcgcgca
     3901 ggcgctggac cacgatgatc cgcctgcgaa gctggacgac caggcagccc tgctgcccga
     3961 tctggcgctg caattgctga accatctcgc gcgcggccgt gatacgctgg tcaacaaaga
     4021 cgccgctggc ctggccgccc ggatgggccg tgccggatgg ggctggtccg cgtacgtgat
     4081 ggaagcactc ggccagcccg atgccgccgc ctccatcgac gctttgaaag tctggcgccg
     4141 cctgccggag ttcgaggaag ctgccgtccc gccgccaccc tcggccttcc cggtcagtga
     4201 aatcgaggcc cgtacccgtc tcgcccgcat cctcggccag cacgccgagc agcggccggg
     4261 ccaggctgac tatgcgggcg cggccactgc agcgtttctg ccgcgcgaga ccaaaggcga
     4321 tccccacctt gtcctcgccg aggccggcac cggcactggc aagaccctgg gctatctcgc
     4381 ccccgccagc gtctgggctg aaaagaacaa aggcccggtc tggatcagca cgttcactcg
     4441 gcatctgcag cgccagatcg agaccgaggt cgcccgcatc tggcccgacc ccaccgagcg
     4501 ccgcgccaac gtcgtggtcc gcaaaggccg ggaaaactac ctgtgtctgc tgaacctcga
     4561 ggaagcggtc aacaacgccg cctccggctt cctgcaaaac cagcttattc ccattggcct
     4621 catcgcacgg tgggccgcag tcaccgagga cggtgacatc cagggcggcg acctgcctgg
     4681 ctggttgggc gaactgcatg gcgcagcgtt gattgcaagc ctcgccgacc ggcgtggcga
     4741 gtgcatccac ggtgcctgca cccactaccg ccgctgcttc gtggagcaca cgatccgtcg
     4801 cgcccgaacc gcgaaactgg tggtcgccaa ccatgcgttg gtcatgaccc aggcggcttg
     4861 gggcgggttg gacgacaatg ctgtgccgac acggtatgta tttgatgagg gccaccacgt
     4921 cttcgatgcc gccgacagtg cgttttccgc gacgttgtcc ggcctggaaa ccagcgagtt
     4981 gcgacgctgg ctgttgggcg gggaaggcgg ccgctcccgg gctcgcggtc tcgcacgccg
     5041 cgtcgaggac ctggttgccg accgtccaaa cctgacgacg ccgctggatg ccatcctgca
     5101 ggccgcccga gccttgcccg gaattggctg gaccgcgcgg ctcaccgagg aagggccgga
     5161 actcgaaggt gtcgagccca ggcaaaccaa tccgaccgaa tttttccttc gcctggtgcg
     5221 ccggcaggtg atggcgcgca cgtcggcaga cgaggggcct cgggcgcgcc acaaccccta
     5281 tggcaccgtg gaatgcgacg tgcacccgct gaacgagccc gttgccgagg ccgccgatcg
     5341 cctcgcccgc gccctgggcc gcctcgccga tccggtggaa acgttacgga cccggttgct
     5401 cgcccgtgcc gaggatgagg cggaggattt ggatgccgcc acgcggctgc ggatcgaggc
     5461 gatcgcccgt tcgctcgacc ggcgcgccat ccagccgctg cgtgcatggc ggtcgatgct
     5521 gaccgcgctg gccgaaccgg atcaggagcc gggcgatcgg cctggttacg tcgcgttctt
     5581 ccggctggac cggcgcgacg gcaatcgcga tttcgacgtg ggactgcatc ggcattggct
     5641 cgatccgacg gtgccgtttg cgttgacctt ggcggcgcct gcacaagggg tgctggttac
     5701 ctccgccacg ctgcgcgacg ccggaaccgg cgatcccgaa cggtcctgga cggcggccga
     5761 ggcccgggtc ggcgcgccac atctgccatc gccggcgatc cgggcggcgg tcgcttcgcc
     5821 gttcgactac gcagcacaga ctcgcgtgct ggtggtgacc gatctggccc tgggcgacat
     5881 tggacagctc gcttcggcgt ttcaggcgct gttcgttgcg gcgggcgggg gggccctggg
     5941 cttgttcacc gcgatcaacc ggttgcgcgc agtgcaagcg aggatcgccc cggaactcga
     6001 ggcgctgaat atcccgcttt acgcccagca tgtggacgcg atgggcaacg ccacattggt
     6061 cgatattttc cgggctgagg aggatagttg cctgctcggc acggacgcga tgcgcgatgg
     6121 cgtcgacgta ccgggccgcg cgcttcggct tgtggtgttc gagaaagtgc cgtggccgcg
     6181 acccgacatt ttgcatcggg aacggcgcgt gcatttgtcg cacggcgatc cgaagggatg
     6241 ggacgaccgg atcgcgcgat ccaggttgcg ccaggcgttc ggccggctaa tccggcgggc
     6301 atcggaccgc ggcgtgttcg tgctgctgga tcgcggtgcg cccagtcgat tgatgtcggc
     6361 atttccggag ggcgtcgtgg tccagcgggt cggattggcg aaagccgtgg aagcgacacg
     6421 gggttttctg catgacccgg cgtgatcgat gcgcctcgta acctggaaca ttcgcgctgg
     6481 cggcggcacg cgccttgcga agattactga agcgctcgcc gcgcaccagg ccgacgtgct
     6541 cgtactgacc gaatatcgtt ccggcgccgc gggccagagc ttgcgcgcca tcttgcgcga
     6601 tgagggttac gtttggctaa gcccggttga accgccgggc atttgcaacg gcgtgctgat
     6661 cgccacacgt cgaaagcccg gctcgattgc ccatgtgacc gaacatgtgc cggagccgtg
     6721 gcggatgctg accgtcacga tcgatcgtat gcgggtgttc ggcatttaca tgcccaacct
     6781 gaaagcgaaa attccgtact gggaagcact gattgaggcg tcgcgaccgc attgcgcgcg
     6841 gcacgctctg gcgatcggcg atttcaatac ctgtcgggcg ttcctcgacg agccaggtgc
     6901 caccgaccgt accgcgccat tcctggacaa aatcctggcg gccggattcc aggatgtctg
     6961 gcgtgaccgg tttcccgagg ggcgcgagtt ttcctggtac agccatcgcg gcaacggatt
     7021 tcgtgtcgat catgcttttg cctcgcagct tttggcgcga cgcatccggg aaattcgtta
     7081 ctcacatgtg gaacgggcgg tgggcgtatc ggaccattcc gcgctgttac tggatatcga
     7141 tacgatcacg ccgccattgc atagccgcgc cggcgcgcag gcggtaccgg atgccgtcca
     7201 gatactcgtt cgatgagcat ggcgcagtcg tctgcgaggc cagccttcat cgccgcatcg
     7261 aggaacacct gttccagcac atcctgttgc gcgtgactgc cgccgaggcg gtacatttcc
     7321 cccaacactg gacgcatcaa cgcaacggcc tgcgcatact ggccattgcc atgggccaat
     7381 actgcctgac tgaccggaat ggcaacgtcg ccgaccagcc ttgcattgct gcccggtcct
     7441 tgcgcgtaat cgcgcatcgc ttccagcatc tgccgtgccg cgttctcgcg tccggtcgca
     7501 gccagcgcca tcatccagtg cggcaaggta aatgccgaca gacaatcgcc aatcctggcc
     7561 tcggctttgt c
//
LOCUS       DATAVD010001617         3502 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_338216, whole genome shotgun sequence.
ACCESSION   DATAVD010001617 DATAVD010000000
VERSION     DATAVD010001617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3502
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338216"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..274
                     /locus_tag="VHX39_31100"
     CDS             <1..274
                     /locus_tag="VHX39_31100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995641.1"
                     /translation="GVSCGSKCTDTELQTGTQAQAALAKAAGINISTIYYSGDTSPSD
                     ESTYQTFLAGLVTGTGKSLVAPSAATIDASYASLCSSIPSVLKLAY"
     gene            complement(360..1148)
                     /locus_tag="VHX39_31105"
     CDS             complement(360..1148)
                     /locus_tag="VHX39_31105"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3995642.1"
                     /translation="MTKLTINQVSKTYADGTEALRGIQVTAGSGEIVAILGGSGCGKT
                     TLLRLVAGLDQPSGGEIRLDDQVIAGTHPAVSAVFQEPRLLPWLNVTGNVGFGGRRLS
                     QAERRRRTGALLERIGLAAYGKRWPRDLSGGQQQRVANARALIGHPGILLLDEPFSAL
                     DPFTRATQHTLVLDLWRELRPTILMVTHDVDEAVFLADRIVIMRPRPGRVHEMMAVDP
                     PRPRDRLAPAFDLMKRRVMRAIDRSLAEEQPRQESASGNLSPWV"
     gene            complement(1145..1912)
                     /locus_tag="VHX39_31110"
     CDS             complement(1145..1912)
                     /locus_tag="VHX39_31110"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3995643.1"
                     /translation="MTRASRLVGWIIPLLLAAGWEATVRLGFASGRLMPPPSRLVVTA
                     SALLRSGELQSHTLATLTRVLIGFAIGGALGTIFGMLNGASSLLHRLFDPSIQALRSI
                     PSLAWVPIFILWMGIFERSKIALIAVGVFFPVYLGTLTAIQSVDRKLIEVGRVFGLSS
                     LGIALRITWPAVMPIWIASLRSGLGLGFMFLVAAELMGASEGLGYLLVDGQQMGRADT
                     ILVAMISFALLGKAADAVLVALSIPLLRWQDMARTRL"
     gene            complement(1917..2888)
                     /locus_tag="VHX39_31115"
     CDS             complement(1917..2888)
                     /locus_tag="VHX39_31115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005488 - binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0042918 - alkanesulfonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX3995644.1"
                     /translation="MTQPINRRTLGISAIALLSTGVARAAAPSEIVIDWATYNPVSLV
                     LKDQRLLETAFAPDNISIRWVQSAGSNKALEFLNAGSLDFGSTAGAAALIGKVNGNPI
                     RSIYVYSRPEWTALVTMPDSPIKTVADLKGQRVAVTRGTDPHIFLVRALATAGLGEKD
                     VKLVLLQHPDGRTALERGDVAAWAGLDPMMAAAELESHARLFYRNPAANTWGVLNVRE
                     EFATAHPDLVRKVLTQYEIARKWAIAHKPELITFMGAADKLSAAVNERQLERTDLSSG
                     MIGETQATTIIEAGKALQVAGVLDASVDVTAVTRGMIDPSYARAIGA"
     gene            3143..>3502
                     /locus_tag="VHX39_31120"
     CDS             3143..>3502
                     /locus_tag="VHX39_31120"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3995645.1"
                     /translation="MKVRFWGVRGSLPTPGRRTVRYGGNTACVEVWLDDRRLILDAGS
                     GLVEFVAATATEPGPVNTDLLLSHMHYDHICGLPFYAPLFQPKNEIRIWSGRLSHGIA
                     ARDAMRSIMTPPLNPEMA"
BASE COUNT          683 a         1086 c         1122 g          611 t
ORIGIN      
        1 cggggtgagc tgcggcagca agtgcactga tacggagctg cagaccggga cacaggccca
       61 ggctgcgctg gcgaaagccg ccggtatcaa catttctacg atctattact ctggcgatac
      121 cagtccgtcg gatgagtcaa cctatcagac attcctggcc ggtctggtga ccggaaccgg
      181 gaagtccctg gtggcaccgt cggcagcgac aatcgatgct tcctatgcct cgttgtgctc
      241 gtcgatcccg tccgtgttga agttggcata ctgacccggg acggagatgg caattcgggc
      301 aatgccggga ctggttgcgc cagtctccgg cagcgcccgt gactgataaa aaacccagct
      361 cacacccagg gtgacaggtt gcccgacgcg ctttcctgac gcggctgctc ctcggccagg
      421 gaccggtcga tcgcccgcat cacccgtcgc ttcatcagat cgaaagccgg agccagccgg
      481 tcccgcggcc gcggcggatc cactgccatc atctcatgca cccgtcctgg acgaggccgc
      541 atgatcacga tccgatcggc gagaaataca gcctcatcca cgtcgtgcgt caccatcagg
      601 atggttggcc gcaactctcg ccaaagatcg agcaccaaag tgtgttgcgt cgcacgggtg
      661 aaggggtcca gcgcggagaa cggctcgtcc agcagcagga tgccgggatg gccgatcagc
      721 gcgcgggcgt tggcgacgcg ctgctgctga ccgccagaca aatcgcgagg ccagcgtttg
      781 ccgtatgccg ccagaccgat ccgctccagc aaggcgccag tgcggcgccg gcgttccgcc
      841 tgggacagac gcctgccgcc aaatccgaca ttgccggtca cgttcaacca cggaagcagg
      901 cgcggttcct ggaacacggc actgacggca gggtgggtgc cagcaatgac ctgatcgtcc
      961 agccggatct ccccgcccga aggctgatcc aggcccgcga caaggcggag caacgtcgtc
     1021 ttgccgcaac cggagccgcc gagaatagcg acgatttcgc cactgcctgc ggtgacctgg
     1081 atgccgcgca atgcctcagt gccatcggcg taggtcttgc tgacctggtt gatcgtcagt
     1141 ttcgtcacag ccgcgtccgc gccatgtcct gccaccgcag cagcggaatg ctcagtgcca
     1201 ccagcaccgc atcggccgcc ttgcccaaca gcgcaaaact gatcatcgcc acgaggatgg
     1261 tatcggcgcg gcccatctgc tgcccatcca ccagcagata accgaggcct tcggaggcgc
     1321 ccatcaactc cgccgcaacc agaaacatga acccgagacc cagacccgag cgcagcgacg
     1381 cgatccagat tggcatcacc gccggccagg taatgcgcaa cgcaatgcca agggacgaca
     1441 ggccgaagac gcggccaacc tcgatcagct tgcggtcgac gctttggatg gcggtcagtg
     1501 tcccgagata gaccggaaag aacaccccaa cggcgatcag ggcgattttc gacctttcga
     1561 aaatccccat ccacaggatg aagatcggca cccaggcgag cgacgggatc gatcgcagcg
     1621 cctggatcga aggatcgaac agtcggtgca gcaggctgct ggcgccattc agcatgccga
     1681 agatcgtgcc aagagcgccg ccgatggcga agccgatgag cacccgcgtc aacgtggcca
     1741 gggtgtgcga ttgcagttcc ccgctgcgca gcagggccga cgcggtcacg accaaccgcg
     1801 aaggcggcgg catcagccgg ccggaggcaa agcccagacg gaccgtcgcc tcccatcctg
     1861 ccgcgagcag cagcgggatg atccagccaa cgaggcggga cgcacgggtc aaaccgtcat
     1921 gccccgatcg cgcgggcgta ggacgggtcg atcatgcctc gggtgacggc ggtcacatcg
     1981 accgaggcat cgagcactcc ggccacctgc aaggctttgc cggcctcgat gatggtcgtt
     2041 gcctgagttt cgccgatcat gccgctggac aaatcggtgc gttccaattg ccgttcgttg
     2101 actgcggcgg acagtttgtc ggcggccccc atgaaggtga tcagctccgg tttgtgggca
     2161 atcgcccatt tgcgggcgat ctcatactgg gtcagtacct tgcgcacgag gtcagggtgg
     2221 gcagtggcaa actcctcacg gacgttcagc acgccccagg tgttggccgc tggattgcga
     2281 taaaacaggc gggcgtgcga ttcgagttcg gcggcggcca tcatcgggtc gaggccagcc
     2341 caggcggcaa cgtcgcctcg ttcgagagcg gtgcggccat cggggtgctg cagcagaacg
     2401 agcttgacgt ctttttcgcc gaggcccgcg gtggccagcg cccgcaccag aaagatgtgc
     2461 gggtcggttc cgcgtgtcac tgcgacccgc tgacccttga ggtcggcgac ggtcttgatc
     2521 ggactgtccg gcatggttac caatgcggtc cattccgggc gcgagtagac ataaatgctc
     2581 cggatcggat tgccgttcac cttgccgatc aatgccgccg caccagcggt tgaaccaaag
     2641 tcgagcgaac cggcgttgag aaattcgagc gctttgttgg agccagccga ttgcacccaa
     2701 cggatggaaa tgttgtcagg cgcgaacgcg gtctccagca atcgctggtc tttcagcacg
     2761 agactgaccg gattgtaggt tgcccaatcg atgacgattt cactgggcgc ggcagcgcgc
     2821 gcgactccgg tggaaagcag tgcgatggca gagatgccaa gcgtgcggcg gttgataggt
     2881 tgggtcatgt ggtcctcccg gttgcattat cgcggatgcg aaaacggaat ttcacttcca
     2941 tggcaagggc tggtgtgcga gagaggagag gtccgggctt ttcccttcca ggaggggaaa
     3001 tcgatccaag atctggtgcc acaacagaaa tatttcttga ccccatgctg atcgcgcggt
     3061 ggcggaacgc gccgttcggt gatggcattg ggttgtggca tgaagggacg ccgccataca
     3121 ggcggtgcgg atgtggcatc ggatgaaagt gcgcttttgg ggagtgcgtg gctccttgcc
     3181 gacaccgggc cgccggacgg ttcgttacgg tggaaatacc gcctgtgtgg aagtttggtt
     3241 ggacgaccgg cggctgattc tcgatgccgg gtcaggactg gtcgaattcg ttgcggccac
     3301 ggcgacagag cccggtccgg tcaataccga cctgctgctg agccacatgc attacgacca
     3361 catttgcggg ctgcctttct acgctccgct gtttcagcca aagaacgaga tccggatctg
     3421 gtccggccgc cttagccatg gcatcgcggc gcgggacgcc atgcgatcca tcatgacgcc
     3481 gccgttgaac cccgagatgg ca
//
LOCUS       DATAVD010001618         5258 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3313585, whole genome shotgun sequence.
ACCESSION   DATAVD010001618 DATAVD010000000
VERSION     DATAVD010001618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5258)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5258)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5258
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3313585"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..302)
                     /locus_tag="VHX39_31125"
     CDS             complement(<1..302)
                     /locus_tag="VHX39_31125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004279658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3995646.1"
                     /translation="MDIGVFIPINNNGWIISATSPQYMPSFELNKQVVLKAEAYGLDF
                     ALSMIKLHGFGGPSRYWDYNLESFTLMAGLAAVTSRIQLFASVAVLTLPPPIAARMA"
     gene            complement(357..1946)
                     /locus_tag="VHX39_31130"
     CDS             complement(357..1946)
                     /locus_tag="VHX39_31130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3995647.1"
                     /translation="MKRRQLLRYAAGSAAAIGIGRPSIGRSASATTLKFVPYADLALL
                     DPMAGALVTRNHVLMVFDTLFALDAAGNAQHQMLAGHTVDADQKIWTLTLRDGLLFHD
                     NTPVLARDVVASLRRWGVKDPFGQALMAATDDLSTANDKQIVFRLNRPFPLLPQALAK
                     PTINIPAIMPARLAAAPADKLMNEMVGSGPFRFLPDERISGARNVYAKFEKYVPREGV
                     ASFCAGPRIANFERVEWLTTPDPATQAAALHAGEVDWVEQPIMDLVPSLKADRNLIVE
                     VAETHGLIGMMRFNQLYPPFDNPGIRRAVLRAINQAEFMTAVAGEADATVINDRVGFF
                     DPASRYASDAGMENFSANPDFAALKKDIQAAGYGGEKVVFLGAGDVPRITAVCEVGAD
                     VLSKLGLNVDYVSLDWGSIVQRNLRQQPPAEGGWNVFAAMTGGLDWDNPACNAGLRGN
                     GRAATAGWPTAPKLEAIRDQWLHATDISAQKALAADMQRQAFIDVPTVPLGLYYQPIA
                     YRNDLTGMMKGLVLFTGVRRV"
     gene            2531..3727
                     /locus_tag="VHX39_31135"
     CDS             2531..3727
                     /locus_tag="VHX39_31135"
                     /inference="COORDINATES: protein motif:HMM:NF024825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3995648.1"
                     /translation="MACSNVQQRPGLQIGIIFSTSGSYAAVGCDMRDGALLAVNQVNA
                     DPSFPFTLDPVILNPDGTLDAYRSGCEALLRDRDIRHVIGCYTSSSRKELIPVIEKHD
                     ALLWYPSHYEGFESCDSVIYGGAAPNQHLAPLAEWVLPRFGANVYCIGSNYIWPWENN
                     RIMRQIATDCGGRVLRERYLAIGCTDVAEVVRDIAAMRPDFIFNTLIGESSYAFYRAY
                     HALSETNPDFAPDRRPVVSCSLSEPELRAIGGSAAIGHIASSVYFQSIARSENAAFIA
                     EFRNTFGADRVTSADAESAWIVTRLLALSLRAAGSSAIPDVKRALYACRLEAPQGSVW
                     IDPENNHAWLTPRIGRSVAGAGFEMVWEAATPTRPDPYLANLSTERLRGLVARPERAR
                     LRVVGP"
     gene            3724..4377
                     /locus_tag="VHX39_31140"
     CDS             3724..4377
                     /locus_tag="VHX39_31140"
                     /inference="COORDINATES: protein motif:HMM:NF044448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ANTAR domain-containing protein"
                     /protein_id="HEX3995649.1"
                     /translation="MSAPVTSFRGLRALLLHRQDHNRDALESQLRRIGLLVTCAAPLG
                     DGGLPAADVIFFDADLGYEGLFPWDRNEPPVPLVAVLASEAPGRLEWALDQGATSYLL
                     KPIGSVGAFNALVVAWRLFSERRDTRVALSDLSERVRARPIVVRAALEVMNGLGVSEE
                     RALTLLRQAAMRERITVEALCARIAAGGALASLIHPQAVAADPLRSVQRRPLQRRQK"
     gene            4389..>5258
                     /locus_tag="VHX39_31145"
     CDS             4389..>5258
                     /locus_tag="VHX39_31145"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3995650.1"
                     /translation="MTDEPIPTSVEQPIPTTHGGPTRRGVIQGAAGLATAGAVLGRVN
                     IVRAAADNPVKIGFIEDESGNLSIYGIQKLHAAQLAVQEINDGFTLAGGPVGPGGFGT
                     MGLYSPTPPTLSAEAGGKLDIVSDGGQPGQHAIVSVDQDNILLPSGEKGLLGRPVNLL
                     SSDGQSNNTLWQQLARKMIQEDKVDVLVAGFASAEREAIRPIVDQRKQLYFYTNQYEG
                     GVADEFTFCTGAVCEQQVIPVMQYMVEKFGPKIFTIAANYNFGQLTASWVRSFAPVLK
                     AKVIGEEFPPLEVS"
BASE COUNT          928 a         1669 c         1694 g          967 t
ORIGIN      
        1 gccatgcgcg cggcgatcgg cggcggcaag gtcagcaccg cgaccgaggc gaacaactgg
       61 atccggctgg tgaccgcggc caacccggcc atcagcgtga acgattcgag attgtagtcc
      121 cagtaccgcg acgggccgcc aaacccatgc agcttgatca tcgacaatgc gaagtcgagt
      181 ccataagcct cggccttcag cacgacctgc ttgttgagct cgaagctcgg catgtactgc
      241 ggcgacgtgg cggagatgat ccatccgttg ttgttgatgg gaatgaagac gccgatatcc
      301 atggaaagcc ctcgcagtga tgaggcatcc ctcgcagcaa gccccgtgcc atttgttcag
      361 acgcgccgca ccccggtgaa cagcacaagc cccttcatca tgccggtcag atcattccga
      421 tatgcgatcg gctggtagta caatcccagc ggcacggtcg gcacgtcgat aaaggcctgg
      481 cgctgcatgt cggcggcgag cgccttttgc gccgatatat cggtcgcgtg cagccactga
      541 tcgcggatcg cctccagttt cggcgcggtc ggccatccgg ccgtcgcggc tcggccgtta
      601 ccccgcagcc ccgcgttgca ggccgggttg tcccagtcca gcccgccggt catcgcggcg
      661 aacacgttcc acccaccctc ggccggcggc tgctgacgca ggttgcgttg cacgatgctg
      721 ccccagtcga gcgagacgta gtcgacgttc agcccgagtt tgctcaggac gtcggcaccc
      781 acctcgcaaa ccgcggtgat acgcggcaca tcgccggcac ccaggaagac gaccttctcc
      841 ccgccatagc cggcggcctg aatgtccttc ttcaaggccg cgaaatccgg attggcgctg
      901 aagttttcca tcccggcatc ggatgcgtag cgcgaggcgg ggtcgaaaaa cccgacgcgg
      961 tcgttgatga cggtggcgtc ggcttcgcct gccacggcgg tcatgaattc cgcctggttg
     1021 atcgcccgca acacggcgcg ccggatgcca ggattgtcga agggtggata caactggttg
     1081 aaccgcatca tgccgatcag gccgtgggtc tcggccacct ctacgatcag gttgcgatcg
     1141 gccttcagcg acgggaccag atccatgatg ggctgttcga cccaatcaac ctcgccggca
     1201 tgcagggcgg cggcctgggt ggccgggtcc ggcgtggtca gccattcgac acgctcgaaa
     1261 ttggcgatcc gcgggccggc gcagaaactc gcgacgccct cacgcggcac gtatttttcg
     1321 aattttgcgt agacgttgcg ggcgccggat atgcgctcgt ccggcagaaa ccggaacgga
     1381 ccgctgccga ccatctcgtt catcaactta tccgcggggg cggcggcgag gcgtgccggc
     1441 atgatggccg ggatattgat ggtgggcttc gccagtgcct gcggcagcag cgggaacggc
     1501 cggttcaggc ggaacacaat ctgtttgtcg ttggcggtgg acaggtcgtc ggtcgccgcc
     1561 atcagggcct gaccgaatgg gtccttgacc ccccagcggc gcaggctggc gacgacgtcg
     1621 cgggccagca ccggcgtgtt gtcgtggaac agcaatccgt cccgcagcgt cagggtccag
     1681 atcttctggt cggcatcgac ggtatgccct gcgagcatct gatgctgcgc gttgccggcg
     1741 gcatccagcg cgaacagtgt gtcgaacacc atcagcacgt gattgcgcgt caccaatgca
     1801 ccggccatcg gatcgagcag cgccaggtcg gcgtaaggga cgaatttcag ggtcgtcgcc
     1861 gaggcagatc gcccaatgga tgggcggcca atgccaatcg ctgcggcaga tcctgcggcg
     1921 taccgcaata gttggcgtct tttcatgcgc gtgccctctg ctgtcacgag gtagtgacca
     1981 gtgtataggc ataggagcaa taaacgcgcc aatacgtggg cgtcgccggt ctcagctttt
     2041 gcgaccgccc cagagcaagg tgaacgcacc gagccgggat gtgcggtact ctgaaagaac
     2101 tgccccgaat ggcgcgtagg gcgagggatc gccgcaaatt tgcgggtgcg agggcctgag
     2161 cggtcatctc gcgtcttttg cctgaccttg ggtgggcgcg ttggctatcg ccaatccggg
     2221 ccggcgtgtg gccgacggga aaccggtgct gggaggcctc ctgaaggaga tcgtcgccgc
     2281 ccagagccag gagccaatat tgtgtgccgc tggagcctga caaaacgcgc ttgacaaact
     2341 gccgctgaat tgggcacggt cacttatctg aaaaagacat ggcgcacaaa caggcgcgta
     2401 tggccgtttt cagtgcaaat tctatagctt ctgcaatggt gcagagatcg gcaaatgagc
     2461 ccgggcaacg tcgttgccat cgggcctttt tgcgtttgcg ccaccaacga cggaaggtgc
     2521 ccgtaccagc atggcttgct ccaacgtgca gcaacggcct ggcctccaga tcgggatcat
     2581 cttttcgacc tccggctcct acgcggccgt cggctgtgac atgcgcgacg gtgctttact
     2641 ggccgtcaac caggtcaatg ccgatccgtc gttcccgttt acgctcgatc ctgtgatcct
     2701 caatccggac ggcacgctgg atgcgtatcg cagcggctgc gaggcgttgt tacgtgaccg
     2761 tgacattcgc cacgtcatcg gctgctacac gtcctcaagc cgcaaggagc tgattccggt
     2821 catcgagaag cacgatgcgc tgctgtggta cccgtcgcat tacgagggct tcgaaagctg
     2881 cgacagcgta atatacggcg gtgccgcgcc aaaccagcat ctggcgccgc tggccgaatg
     2941 ggtcctgccg cgcttcggcg ccaatgttta ctgcatcggt tccaactata tctggccgtg
     3001 ggaaaacaac cgcatcatgc gccagatcgc caccgattgc ggcggccgcg tgctgcggga
     3061 gcgctatctg gccatcggct gcaccgatgt cgccgaggtg gtgcgcgaca tcgcggcgat
     3121 gcggcccgac ttcatcttca atacgctgat cggcgaatcg agctacgcgt tctatcgggc
     3181 ctatcacgca ctttccgaga ccaatcccga tttcgccccc gaccgccggc cggtggtcag
     3241 ttgcagcctg tcggaaccgg aactgcgtgc gatcggcggt tcggccgcca tcggccacat
     3301 cgcgtccagc gtctatttcc aatcgatcgc ccggtcggag aacgcggctt tcatcgccga
     3361 attccgcaac acgttcgggg ccgatcgggt gacctccgcc gatgcggaat ccgcctggat
     3421 cgtgacgcgc ctgctggcct tgtcgctgcg tgcggcgggg tcgagcgcca tccccgacgt
     3481 caagcgcgca ctgtacgcgt gccggctgga agcgccacag ggatcggtct ggatcgaccc
     3541 ggagaacaac cacgcctggc tgacgccgcg catcggccga tccgttgcgg gcgccggatt
     3601 cgaaatggtg tgggaagccg cgaccccgac ccgcccagat ccctacctcg ccaatttgag
     3661 taccgaacgc ctgcgcggcc ttgtcgcaag gccggagcgc gcgcgcctgc gcgtggtcgg
     3721 gccatgagcg cgccggtcac cagctttcgc ggtctgcgcg ctttgctgtt gcaccggcag
     3781 gatcacaacc gcgacgcact ggaaagccag ttacgtcgca tcggcctgct ggtcacctgc
     3841 gctgccccgc tgggcgacgg cgggctgccg gcggccgatg tcatcttctt cgatgccgat
     3901 ctcggctacg agggcctgtt tccatgggac cgcaacgagc cgccggtgcc gctggtcgca
     3961 gtgctggcat cggaagcacc gggccggctg gagtgggcgc tcgaccaggg tgcgacatcg
     4021 tatcttctga aaccaattgg ttcggtcggc gccttcaacg ccctggtggt cgcgtggcgg
     4081 ctgttctctg aacgccgcga cacccgcgtg gcgctgtccg atctgtccga acgggtgcgc
     4141 gctcggccaa ttgtggtgcg cgctgcgctg gaagtgatga atggcctggg tgtcagcgag
     4201 gaacgcgcac tgaccctgct gcggcaggcc gcgatgcgcg agcgcatcac cgtggaagcg
     4261 ctgtgcgccc gcattgccgc cggcggagcg ctggccagcc tgatccaccc acaagccgtc
     4321 gccgccgacc cgcttcgctc cgttcaacgc cgtcccctgc aacgccgaca gaagtgaagg
     4381 acattccgat gacagacgag ccgataccga cgtccgtgga gcagcccatc ccgacgacgc
     4441 atggcggtcc caccaggcgt ggcgtgatcc agggtgccgc cggccttgcc accgcgggcg
     4501 ccgtgctcgg ccgtgtcaac atcgttcggg ccgctgccga caatcccgtc aagatcggct
     4561 tcatcgagga cgagtccggc aatctttcga tttatggcat ccagaaactg cacgccgcgc
     4621 agctcgcggt gcaggagatc aatgacggtt tcaccttggc cggtgggccg gtcggaccag
     4681 gtggctttgg aacgatgggg ctttattcgc cgaccccgcc gacgctttcg gccgaagccg
     4741 ggggcaagct ggatattgtc agcgatggcg gccagcccgg ccagcacgcg atcgtttcgg
     4801 tagaccagga caacatcctg ttgccgtcgg gcgagaaggg cctgctgggg cgcccggtga
     4861 acctgctgtc gtccgacggg cagtcgaaca acacgctgtg gcaacaactt gcccggaaga
     4921 tgatccagga ggacaaggtc gacgtattgg tcgccggttt cgccagtgcc gagcgggagg
     4981 cgattcgacc gatcgtggac cagcgcaagc agttgtattt ctacaccaac cagtatgaag
     5041 gcggtgttgc tgacgaattc accttctgca ccggcgcggt gtgcgagcag caggtgatcc
     5101 ccgtaatgca gtatatggtg gagaaattcg gcccgaagat cttcaccatc gccgcgaact
     5161 acaatttcgg tcagttgacg gcatcctggg tgcgatcctt cgcgccggtg ctgaaggcca
     5221 aggtaattgg tgaagaattc ccgccgctgg aagtgtcg
//
LOCUS       DATAVD010001619         2828 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2014471, whole genome shotgun sequence.
ACCESSION   DATAVD010001619 DATAVD010000000
VERSION     DATAVD010001619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2828
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2014471"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..461)
                     /locus_tag="VHX39_31150"
     CDS             complement(<1..461)
                     /locus_tag="VHX39_31150"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HEX3995651.1"
                     /translation="MVELSRRAVFKAMGAVGAAILPTAGTAATPPVATPRTYLFLNSI
                     EAAFIEAAVARLIPADDQWPGAIEAGVPNYIDKQLGGAWGAGERLYRSGPWQPGTASQ
                     GYQLPFVPAELFRTAIDAIDKDLAQAGTPSAQMTHDQQDAWLHGLEAGGKDL"
     gene            complement(853..1482)
                     /locus_tag="VHX39_31155"
     CDS             complement(853..1482)
                     /locus_tag="VHX39_31155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995652.1"
                     /translation="MGAKTIGADEAGAGTTEELGPDPMTSGMGLGTGLTGIGLRPALP
                     VSKEPNGIPTGEAPPGDGVDIADDDAVPVVGLVPQFAVLPGSGIPIAIPPPSKVVPEP
                     DSPEDEVACTGHATPPVPSGEPAGSGLRPGDGSSVVPMAFPVGGTVVAPVMPGGEVVP
                     MPETGSATCAATGPQPNPIVRIDAISACRIVAATEARLNCDAGFNASGS"
     gene            1590..2768
                     /locus_tag="VHX39_31160"
     CDS             1590..2768
                     /locus_tag="VHX39_31160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004272519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX3995653.1"
                     /translation="MRRKIAIPVAVLIILAAGGGGLAYTKGLATRKATAQFSPPVPIV
                     AGVVTEHDVPIYLKGVGTVIAYNTDIVRSQIQGQVVSINFAEGQAVRNGDLLAQIDPR
                     PYQAQIEQYTANRDRDQAQLGNAIANFERYVPLEKEGWATAQLLDTQRAQVAQLQNAV
                     KSDQALIDAANVQLSYTRLTSPIPGVTGIRQIDVGNIIHPTDPNGLVVVTQLEPISVI
                     FTLPETDLPQIQQEQMATKAPLPVLAYSQDGKIQLDQGTLELVDNEILQTTGSIRLKA
                     DFPNLQHRLWPGELINVRLLVDTRHNGLTVAASVVQQGPQGAYSYVVGSDGTVSLRPI
                     TVAEISDGQALIDSGLKANEQVVVDGQYKLQPGAHVTILRGKAAEEALAQSAQQAPIP
                     "
BASE COUNT          558 a          864 c          851 g          555 t
ORIGIN      
        1 aggtccttgc cgccggcctc cagcccgtgg agccaggcgt cctgctggtc gtgggtcatt
       61 tgggcggatg gcgtgccggc ctgcgcaagg tccttatcga ttgcatcgat tgcggttcgg
      121 aataactccg caggaacgaa aggcagttgg tatccctggc tcgcagtgcc cggttgccag
      181 ggaccgctgc ggtacaggcg ttcgcccgcg ccccaggcac cgccaagctg tttgtcgata
      241 taatttggaa cgccggcttc gattgctcct ggccactggt cgtcggcggg aatcaaccgc
      301 gcgactgcgg cctctatgaa ggcagcctcg atgctgttca ggaacaaata tgtgcgcggt
      361 gtcgctacgg gcggcgtcgc ggcggtgccg gcggtcggta aaatcgcagc gccaaccgcg
      421 cccatcgctt tgaacacagc cctgcgtgac aattcgacca tgtttgcact cccattttga
      481 attgcccgca ctcaatcctg tggacgaggg ttgcctcgca cagtgctgtt tcgtgaatag
      541 gatatatgcg cgatccggcg attgtatcgt tggattcagc cttagatctt ctgagttcat
      601 ctggtcacag acattgtcgg gcgtacaggt accggccgca aaagggcatt cgtcccgttc
      661 gcctcagaat atctaaggag tgctcagacg gacccaatgg tttcgctgcg cgtcagacaa
      721 catattccgg ttgggacatc tcgatgaaca cgagatatcc gcaaggagcg tggacgtgag
      781 gactaccatg attgcaaaca atcggaattc gatggttccg cgaatcctca ctgcctcaga
      841 gcggcaacct cctcaggagc ccgaggcatt gaaaccggca tcgcagttta accgggcttc
      901 ggtggcggcg acgatgcggc aggcgctgat cgcgtcgatc ctgacaatcg ggttcggctg
      961 cggtcctgtg gctgcgcaag tggccgaccc ggtttctggc ataggcacaa cctcgccacc
     1021 tggcatgacc ggcgcaacga cggtcccgcc aaccggaaac gccatgggca cgacagaact
     1081 gccgtcgccg ggcctcagtc cgcttcccgc tggctcgcct gacggtaccg gcggtgtggc
     1141 gtgcccggtg caagcgactt catcttctgg actatccggc tctggcacga cctttgacgg
     1201 tggaggaatg gcgatgggaa tgccgctgcc cggcagcacc gcgaactgcg gtaccagccc
     1261 aaccactggt actgcatcgt cgtccgcgat gtcgacgccg tcgccgggtg gagcctcccc
     1321 ggtgggaatt ccgttgggtt ccttggagac gggcaatgcc ggcctcagcc ctatgccggt
     1381 cagcccagta cccaatccca tgccgctcgt catgggatcg ggtcctaatt cctcggtggt
     1441 cccggccccg gcctcgtccg cgccgatggt ttttgcgccc aatacattca caccggccgt
     1501 gggaattggc ggaccgtgtg tggcgactgg ctcgacggtg tcgtcttcat ctccgaccgg
     1561 ctgctgacca ataactttgg agaaaaccaa tgcggcgcaa aatcgccatt ccagtggctg
     1621 tactgatcat tctcgctgcc ggcggcggag gtctcgccta cacgaaaggg ctggcaacaa
     1681 gaaaggccac ggcacagttt tcaccgcctg tgccgatcgt tgccggagtg gtcactgagc
     1741 atgacgtgcc gatttatctt aaaggggttg gtactgtcat cgcttataac acagacattg
     1801 tgcgcagcca gatccagggc caggtcgtca gtatcaattt cgccgagggg caggctgtcc
     1861 gcaacggcga cctgctggcg cagatcgatc cgcgaccgta tcaggcgcag atcgagcaat
     1921 acaccgcgaa ccgcgatcgc gatcaggctc aactcgggaa tgcgatcgcg aactttgagc
     1981 gctacgtgcc tctggagaaa gagggttggg ccaccgcaca actgttggac acacagcggg
     2041 cgcaggtggc gcagttgcag aacgctgtca aatcagatca ggcgctgatc gatgccgcaa
     2101 atgttcagct cagctatacg cggttgacct cgccgatccc gggcgtcacc ggcatccgtc
     2161 agatcgacgt gggcaacatc atccatccga ccgaccccaa cggcctcgtg gtcgtcacac
     2221 agctggaacc gatctcggtg atattcacgc tgccggaaac ggacctgccg cagatccagc
     2281 aagagcagat ggcgaccaag gcgccgcttc cggtcctcgc ctatagccag gacggcaaga
     2341 tccaactcga tcaaggaacg ctcgagctgg tggacaatga gatcctgcaa actaccggct
     2401 cgatacgatt gaaggcggat ttcccgaacc tgcagcatcg gctgtggccc ggcgagctca
     2461 tcaacgtgcg gctgctggtg gatacacggc ataacggcct gacagtcgcg gcatcggttg
     2521 tgcaacaagg ccctcagggc gcttactcat atgttgtcgg ttccgacggc accgtttccc
     2581 ttcgcccgat cactgtcgcg gagatcagcg acgggcaggc gttaattgat tccggcctca
     2641 aagcgaatga acaggtcgtg gtcgacggac agtacaaact gcaacccggc gctcatgtca
     2701 caatcctgcg cggcaaggcg gccgaggagg cgctcgcgca aagcgcgcag caggctccga
     2761 tcccatgaac atttcagcac cattcatcca acggccaatc gcaaccggcc ttttgatggt
     2821 cgggttgt
//
LOCUS       DATAVD010001620         1595 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2385840, whole genome shotgun sequence.
ACCESSION   DATAVD010001620 DATAVD010000000
VERSION     DATAVD010001620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1595
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2385840"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(328..777)
                     /gene="dut"
                     /locus_tag="VHX39_31165"
     CDS             complement(328..777)
                     /gene="dut"
                     /locus_tag="VHX39_31165"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010514582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEX3995654.1"
                     /translation="MTKIKFKRVEGNTDLPLPAYATPGAAGMDLRAFLPDGPITFEHG
                     ELKMISTGYCVELPTGTEMQVRPRSGLSLKHGFIIPNSPGTVDEDYRGCLMIGLYYLG
                     KAPFTINHGDRVAQAVIADVRRYPTVEVEELSDTERGFGGFGSTGIK"
     gene            complement(802..>1595)
                     /gene="coaBC"
                     /locus_tag="VHX39_31170"
     CDS             complement(802..>1595)
                     /gene="coaBC"
                     /locus_tag="VHX39_31170"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEX3995655.1"
                     /translation="EANMKLLAARGVLVVPPEEGPMACGEFGPGRLAEPPVIYAEIES
                     ALANDGPLAGKHAIVTSGPTHEPIDPVRYIANRSSGKQGHAIAAALKALGARVTLVSG
                     PVTLPDPLGVTTVHVETATEMLASVEAALPADIAVCAAAVGDWRVETAAQKLKKGAQA
                     PILQLSENPDILARISAPGPRRPRLVVGFAAETENLEAYAQAKRARKKCDWIVANNVG
                     GTGIMGGESNEVLLLTGAGAEAWTRMDKQAVAAKLAQKIGQVFHD"
BASE COUNT          285 a          478 c          475 g          357 t
ORIGIN      
        1 gtcgcgctag tctagtctat tatatggcaa aacatcttgc aaaataccct gatataaaag
       61 atcaccttcg taaatcttat gttaagttgt catcccaaga agtggatcga tatcgatcgg
      121 atatcaagaa attgttaggg atagactgaa tactgccgct agggcgtgcg gcaatgcctt
      181 cacgacccgg cgtaaatttg cgaacgccgt gtttcccttc actacggaaa ttgtctctgg
      241 ttcggttgtt gtttcatcat ttgagggcgt ttcggtgaca gataaggcgc cggagcgtcg
      301 aaggtctccc gggtggcatc gctgtcatca cttgattcct gttgatccaa agccgccaaa
      361 gccgcgttcg gtgtcggaga gctcttcgac ctcgacagtc gggtaacgcc gaacatcggc
      421 gatcacagcc tgcgcgacgc ggtcgccgtg attgatcgtg aaaggggctt tgccaaggta
      481 atagaggcct atcataaggc agcccctgta atcttcgtcc accgtccctg gactgttcgg
      541 aatgatgaac ccatgcttga gcgagagccc ggagcgtgga cggacctgca tttcagtacc
      601 ggtaggaagc tctacgcaat aacccgtcga gatcattttg agctcaccgt gttcgaaggt
      661 gatcggcccg tccgggagga aggctcgcag gtccatccct gccgctcccg gggtggcata
      721 ggcgggcaat ggcagatcgg tgttgccttc aacgcgtttg aacttaattt ttgtcattgg
      781 tgatctttct tgatctcgtc gtcagtcatg aaaaacctgt cctatctttt gcgcgagttt
      841 ggcagcgacg gcctgcttgt ccatgcgcgt ccaggcttct gcccctgcgc cggtgagcag
      901 cagaacctcg ttgctctcgc cacccatgat gccggtgccg ccgacattgt tcgcgacgat
      961 ccagtcgcat tttttgcgcg cccgtttcgc ctgggcgtag gcttcgagat tctccgtctc
     1021 cgcggcgaag ccgacgacca aacgcggccg gcgtggtccc ggcgcggaaa tccgtgccag
     1081 aatgtccggg ttttcgctga gctgcaggat cggggcctgc gcgccttttt tcagtttttg
     1141 cgccgccgtc tcgacccgcc agtcgccgac cgctgcggcg cagaccgcga tgtccgccgg
     1201 cagcgccgcc tccaccgaag ccagcatctc cgtggccgtc tcgacatgca cggtggtcac
     1261 gcccagcggg tccggcaggg tgaccgggcc gctcaccagc gtcactcgcg cgcccaaggc
     1321 tttgagcgcg gcggcgatgg catggccctg tttgccggaa ctgcgattgg cgatgtagcg
     1381 caccgggtcg atcggctcat gcgtcgggcc ggaagtgacg atcgcgtgtt ttcccgcaag
     1441 cggaccatcg tttgcgagtg ccgactcgat ctcggcgtaa ataaccggcg gctcggcgag
     1501 gcgcccgggc ccgaattcgc cgcacgccat cggcccttcc tcgggtggca ccacgagcac
     1561 gccgcgcgcg gccagcagct tcatattggc ttcgg
//
LOCUS       DATAVD010001621         3313 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2385924, whole genome shotgun sequence.
ACCESSION   DATAVD010001621 DATAVD010000000
VERSION     DATAVD010001621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3313
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2385924"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..198)
                     /locus_tag="VHX39_31175"
     CDS             complement(<1..198)
                     /locus_tag="VHX39_31175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium-protoporphyrin IX monomethyl ester
                     (oxidative) cyclase"
                     /protein_id="HEX3995656.1"
                     /translation="MRQVSDTTRLAQRDTVLSPRFYTTDFDAMDKLDVTPVRAEWDEL
                     MAEFARDGNKNHFIRNVDFDLD"
     gene            complement(195..473)
                     /locus_tag="VHX39_31180"
     CDS             complement(195..473)
                     /locus_tag="VHX39_31180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995657.1"
                     /translation="MKQIDVRCFVDMEQSPESLHAHAIPEDIDIRPGDSVLVHGAPSR
                     IGYGEHLMLECSATVTRASIFGRSWTHLTAIFALIELFEVGFQPKEST"
     gene            complement(470..925)
                     /gene="puhC"
                     /locus_tag="VHX39_31185"
     CDS             complement(470..925)
                     /gene="puhC"
                     /locus_tag="VHX39_31185"
                     /inference="COORDINATES: protein motif:HMM:TIGR03054.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0015979 - photosynthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="photosynthetic complex assembly protein PuhC"
                     /protein_id="HEX3995658.1"
                     /translation="MTHDRKQPPFPRNTLIIAGSVILLSIMTAAAGRINGTANSTPTA
                     RPLASRELLFRDRTNGAVAVFDASNTAVPIEIVEPATNGFLRATVRGLAQQRIRQGAD
                     KSVPFRLTEWADGRLTLQDPTTGRTVDMEAFGITNEEVFANLLTAKAAS"
     gene            complement(938..1591)
                     /gene="puhB"
                     /locus_tag="VHX39_31190"
     CDS             complement(938..1591)
                     /gene="puhB"
                     /locus_tag="VHX39_31190"
                     /inference="COORDINATES: protein motif:HMM:NF040894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030096 - plasma membrane-derived
                     thylakoid photosystem II [Evidence IEA];
                     GO_process: GO:0015979 - photosynthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="photosynthetic complex putative assembly protein
                     PuhB"
                     /protein_id="HEX3995659.1"
                     /translation="MNEHDFEPVPGLPAPLPEGETILWQGSPAWRSLARRALRVRLAG
                     AYFAGLIAWGISGGISAGTPSTVIALSALRLTALGIVALSLLALFAWLIARTTIYTIT
                     TRRVVLRFGIALPITIQIAFPMIEAAAMHHWLDGTGEIALALQPGQRVAYLVVWPHTR
                     PWKLLKAEPSLRGLTDAANVARILARALSASALQPAKPVSIPAGAIAGNDTHVPAAA"
     gene            complement(1588..2355)
                     /gene="puhA"
                     /locus_tag="VHX39_31195"
     CDS             complement(1588..2355)
                     /gene="puhA"
                     /locus_tag="VHX39_31195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009521 - photosystem [Evidence IEA];
                     GO_function: GO:0005488 - binding [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="photosynthetic reaction center subunit H"
                     /protein_id="HEX3995660.1"
                     /translation="MQAGAITGYIDVAQVALYGFWVFFAGLIFYLRREDKREGYPLVT
                     ERPGQLLDGFPRPPPPKTYLLPHGGTVSSPRVEPPQPPFDAVPVAGWPGAPLQPIGNP
                     MLSGLGPAASALRADTPDLMNETTDLRIVPLRVAIDHYLDDESPDPRTMPVIGADGVA
                     GGIVSDIWIDRAETMIRYLEVTLVAGPSVLLPVPMVRIDTRAGVVNVKSILGAQFEDA
                     PMLANPDQVTLREEDRIQAYFASGHLYAVPSRLEPLL"
     gene            complement(2360..>3313)
                     /locus_tag="VHX39_31200"
     CDS             complement(2360..>3313)
                     /locus_tag="VHX39_31200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995661.1"
                     /translation="LALATDLAPPESHPKVVALLCMMLLLGMVGGALTYGALLAHFTE
                     IKLIQVIQGTALATMLLNVAALWKQEVRDPTLTAKDRLQPTFQQAWATFNQTPKAKRR
                     LLALGLGTVAFSMQDVLLEPYGGQVLHLTVGSTTVLSALLATGGLSGFGLAARLLGRG
                     TDPYRLAAVGALVGLVAFSAVIFAAPLESIVLFAIGTALIGFGAGLFGHCTLTAAMGT
                     ASAGQFGLALGVWGAVQASAAGSAIAAGGLIRDGVSFLASNGILGQAMAGPAVGYSFV
                     YHMEIYLLFATLIAIGPLVRRQSAPGFGLNSLPSHTLSLPR"
BASE COUNT          649 a         1017 c         1078 g          569 t
ORIGIN      
        1 atcgagatcg aaatcgacgt ttcgtatgaa atggttcttg tttccgtcgc gagcgaactc
       61 agccatgagt tcgtcccatt ccgctcggac aggggtgacg tcaagcttat ccatcgcatc
      121 gaagtcggtc gtgtagaagc gcgggctcag caccgtgtca cgttgcgcca acctggtggt
      181 gtcgctgacc tgcctcatgt tgactccttc ggctgaaagc cgacctcaaa caattcaatg
      241 agcgcgaaaa ttgccgtcag gtgagtccag gaccggccga aaatgcttgc ccgggtgacg
      301 gtcgccgaac attccaacat caggtgttcg ccatagccga tccgcgatgg cgcgccatgc
      361 accaggaccg agtcgccggg acgaatgtcg atatcctccg ggatcgcgtg ggcgtgcagg
      421 ctttcgggcg attgctccat gtcgacgaag caacggacgt cgatctgttt catgacgctg
      481 ccttcgccgt cagcagattg gcgaagacct cctcgttagt gattccgaac gcctccatat
      541 ccacagttct gccggtcgtc ggatcctgca gcgtcagccg gccatccgcc cactctgtca
      601 ggcggaacgg caccgactta tcggcaccct gacggattcg ttgttgcgcc agtccgcgca
      661 cggtcgcacg caggaaaccg ttggttgcag gctcgacaat ttcgatcggg acagcggtgt
      721 tgcttgcatc gaacacggcg acggccccgt tcgttcggtc gcggaacaga agctcgcggg
      781 aggcgagagg tctcgccgtg ggtgtgctgt tcgcggtgcc gttgattcgc ccggcggcgg
      841 cggtcatgat cgacaacaag atgaccgatc cggcaatgat caacgtgttg cgcgggaatg
      901 gaggctgttt gcgatcatgt gtcatcggag cgctccgtca agcggcggct ggaacatgcg
      961 tgtcgttacc ggctattgcc ccggcgggga tcgagaccgg cttcgcgggc tgcaaagcgg
     1021 acgccgagag tgcgcgtgcc aggatgcggg caacattcgc ggcatccgtc aggccacgca
     1081 gcgaaggttc ggccttcaac agcttccagg gacgcgtgtg cggccagacc accaaatagg
     1141 cgactcgctg acccggctgc aacgcaagcg cgatttctcc ggttccgtcc aaccagtggt
     1201 gcatggcggc cgcttcgatc atcggaaagg cgatttggat cgtgatcggc aatgcgatac
     1261 cgaaccgcag gacgacccgg cgggtcgtga tcgtgtagat cgttgtgcgg gcgatcagcc
     1321 aggcgaacag tgccaaaagc gacagcgcaa cgatcccgag cgcggtgagt cgcagggcgg
     1381 acaatgcgat gacggttgaa ggggttcccg ccgaaatgcc gccgctgata ccccaggcga
     1441 tcaggcctgc gaaatacgcc ccggccagcc gaacacgcag ggcacggcgc gccagcgacc
     1501 gccaggccgg cgagccctgc cacaggatcg tttcgccctc cggtagcggc gccggcaagc
     1561 cgggaacggg ttcgaaatca tgctcgttca tagcagcggc tccagccgac ttggtacggc
     1621 atacaaatga ccgctggcga agtaggcctg gatccggtcc tcttctcgca aagtcacctg
     1681 gtcgggattg gcaagcatcg gagcgtcttc gaactgtgcc cccaggatgg atttcacgtt
     1741 gacgacgccg gcgcgcgtgt cgatgcgtac catcggcaca ggcagcagca cggatggtcc
     1801 ggcgaccagc gtcacctcca gatagcggat catggtttcg gcacggtcga tccatatgtc
     1861 ggacacgatg cccccggcga ctccatcggc gccgatgacc ggcatggttc gcggatccgg
     1921 gctttcgtca tccagatagt gatcgatggc aacccgtaat ggcacgatac gaagatccgt
     1981 tgtctcattc atcaggtccg gtgtatcggc gcggagggcg gaggccgcgg gaccaaggcc
     2041 ggacagcatc ggattgccaa tcggctgtag cggggcccct ggccatccgg cgacaggcac
     2101 ggcatcgaag gggggctgcg ggggctcgac gcgtggcgag ctgacagtgc cgccgtgcgg
     2161 cagtagatag gtttttggcg gaggcgggcg cgggaaacca tccagaagct gacccggccg
     2221 ttccgtcacc agcggatagc cttcccgctt atcctctcgt cgcaggtaga agatgagccc
     2281 cgcgaagaat acccaaaacc cgtagagcgc gacttgcgcg acgtcgatgt agcctgtgat
     2341 ggctccggct tgcatggcat cacctcggca gactgagcgt gtgggacggg agactattca
     2401 ggccgaagcc tggtgccgat tgccggcgga ccaacgggcc tatggcgatc agcgtggcga
     2461 acagcaggta aatttccatg tgatagacaa atgaatagcc aacggcgggg ccggccatgg
     2521 cctggccgag aattccgttc gatgcaagga atgatacgcc gtcgcggatc aggccgccgg
     2581 cggcgatggc ggatccggcg gcggatgcct gcacggcgcc ccacacccct agcgccaaac
     2641 cgaactgtcc cgcactggcg gtgcccatcg cggcggtcag cgtgcagtgc ccgaacaatc
     2701 cggcaccaaa accgatcaag gcggtgccga tcgcgaacag aacgatggat tccaggggtg
     2761 ccgcgaaaat caccgcactg aaggcgacca gcccgaccag cgcacccacc gccgcgagcc
     2821 gatagggatc ggtgccacgg cccagcaggc gggcggcaag gccgaaaccg ctcaagccgc
     2881 cggtcgcaag gagggcgctc agaacggttg tgctgccgac cgtcagatgc agcacctgac
     2941 cgccgtacgg ctccagcagg acatcctgca tgctgaaggc gaccgtgccc aagcccagcg
     3001 ccagcagccg gcgtttcgcc ttgggtgtct ggttgaacgt ggcccacgcc tgctggaacg
     3061 tcggctgcag gcggtccttg gcggtcagcg tgggatcgcg gacttcctgc ttccacaacg
     3121 cggcgacgtt cagcagcatg gtggcaaggg cagtcccctg gatgacctgg atcagcttga
     3181 tctcggtgaa atgcgccagc agcgcgccat aggtaagcgc gcccccaacc attcccagca
     3241 gcagcatcat gcatagtaaa gcaacgactt tcggatgcga ttccggtggc gcgagatctg
     3301 tcgctagcgc gag
//
LOCUS       DATAVD010001622         2690 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2576833, whole genome shotgun sequence.
ACCESSION   DATAVD010001622 DATAVD010000000
VERSION     DATAVD010001622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2690
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2576833"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..772
                     /locus_tag="VHX39_31205"
     CDS             <1..772
                     /locus_tag="VHX39_31205"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEX3995662.1"
                     /translation="CRHRTRNRAGLQIAGNGGGMSPTLEIPMELIDLSRELIHRTQVH
                     PSHPPVAISVWGDHSEKKVAGDTVFTSMSLSLQMGDHSGTHVDAPVHFDPRPGAASID
                     EMPLEKFYTPAICLDLSHVPLKHAITVPEMQDALAKSGQRIEPGDTVLIHMATNERLL
                     GKPGYQHDFPGLALASVHWLADFGIGMFGVEAVSPAPEGELNYQAHMACAERGITHME
                     CLANLDKLIGRGRFRFIGFPLKIRRGTASPIRAVALFE"
     gene            complement(780..2018)
                     /locus_tag="VHX39_31210"
     CDS             complement(780..2018)
                     /locus_tag="VHX39_31210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995663.1"
                     /translation="MLAWMKDLTARERRTMIACFGGWSLDALDVQIYSFVIPSLLALW
                     HISTAEAGELATITLLVSAFGGWIAGALADRIGRVRVLQIAILWYATFTFLCGFAQDF
                     NQLFILRALQGFGFGGEWAAGAVLMGEVIRDQYRGRAVGLVQTGWSIGWGTAALMFTL
                     FFAFLPEATAWRAMFWVGLAPALLVFWIRRFVEEPELKARRTEPVGWTHLFAALKPPY
                     LSTTWRVAMMVTGAQGGGYALGTFLPTFLKTERHLTSVGTGSYLLVLILGAFCGFVAG
                     AFLSDAIGRRGTFLVSAVGSLIVMMIYMLAPLSNAVILPVGFILGFIDLMKFSPMGTF
                     MTELYPTAVRGVAQGFCYNVGRGVGAIFPVMVGFLAARFGLGNAIVVFSGCGYGLMII
                     ALFLLPETKGRSLQSLEAAE"
     gene            complement(2132..>2690)
                     /locus_tag="VHX39_31215"
     CDS             complement(2132..>2690)
                     /locus_tag="VHX39_31215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HEX3995664.1"
                     /translation="RDQGYLWLSPVEPPGICNGVLIATRNKPGSIAHVTEHVPEPWRM
                     LSVTIDRVRLFGIYMPNLKAKIPYWEALIEASRPHSGRHALAIGDFNTCRAFLDEPGA
                     TDRTAPFLDKILEAGFQDVWRDRFPDGREFSWYSHRGNGFRVDHAFASRLLARRIGDI
                     RYSHVERAVGVSDHSALVLDINAAR"
BASE COUNT          583 a          858 c          793 g          456 t
ORIGIN      
        1 ctgccggcat cgcaccagaa accgcgccgg cttgcaaatc gcggggaatg gcggcggaat
       61 gtccccgaca ctggagatac caatggaact gatcgacctc agccgtgaac tgattcatcg
      121 cacccaggtg catccgtcgc acccgccggt cgcgatatcg gtctggggcg atcattccga
      181 gaaaaaggtt gccggcgaca cggtttttac ctcgatgtct ttgtccctgc agatgggcga
      241 tcattccggc acccatgtcg atgcgccggt gcatttcgat ccgcggccag gcgcggcctc
      301 gatcgacgaa atgccgctgg agaaattcta tacgccggcg atttgtctcg atctgtcgca
      361 tgtgccgttg aaacatgcga tcacggtgcc ggagatgcag gacgctctgg caaaatccgg
      421 gcagcggatc gagcctggcg acaccgtgct gatccacatg gccaccaatg agcggctgtt
      481 gggaaagccg ggttatcagc acgactttcc gggcctcgcg ctggcgtcgg tgcattggct
      541 cgccgacttc ggcattggca tgttcggcgt tgaggcggtc agtccggcgc cggagggcga
      601 gcttaactac caggcacaca tggcctgcgc cgaacgcggc atcactcaca tggagtgttt
      661 ggccaatctg gacaaactga tcggccgcgg cagattccgg ttcatcggtt tcccgctgaa
      721 aatccgccgc ggcaccgcaa gcccgatccg cgcggtggcg ctgttcgaat agtcccgaac
      781 tactccgccg cctccaggct ttgcaacgaa cgccccttgg tttccggcaa cagaaacaaa
      841 gcgatgatca tcagtccgta gccgcaacca ctgaacacca cgatcgcatt gccaagcccg
      901 aacctcgccg cgaggaagcc gaccatgacc ggaaagatcg cgccgacccc tcgcccgacg
      961 ttatagcaga agccttgcgc aacgccgcgc acggcggtcg ggtacaactc tgtcatgaag
     1021 gttcccatcg gtgagaactt catcaaatcg ataaagccga ggatgaaacc aaccggcagg
     1081 atcaccgcat tcgacagcgg cgccagcatg tagatcatca tcacgatcag cgatccgacg
     1141 gccgagacca ggaacgtgcc gcggcgtccg atcgcgtcgg acagaaaagc gccggcaaca
     1201 aagccgcaga atgcgccaag gatcagcacc agtagatagc tgccggttcc gaccgaagtc
     1261 agatgccgtt ccgtcttcaa aaacgtcggc aaaaacgttc ccaatgcgta cccaccaccc
     1321 tgggctccgg tcaccatcat ggcgacccgc caggtggtcg acaaatatgg cggcttcagt
     1381 gcggcgaata aatgggtcca gccgaccggt tcagttcgcc tggccttaag ctccggttcc
     1441 tcgacgaagc ggcggatcca gaacaccagc aatgccggcg ccaggccaac ccagaacatt
     1501 gcccgccacg cggtggcttc cggcaagaat gcgaaaaaca aggtgaacat cagcgcggca
     1561 gtgccccagc cgatcgacca gccggtttgc accaggccca cggctcggcc gcgatattgg
     1621 tcgcggatga cttcgcccat cagcaccgcg ccggccgccc attcgccgcc gaagccaaaa
     1681 ccctgcagcg cgcgcagtat gaacaactga ttgaagtcct gcgcgaagcc gcacaggaac
     1741 gtgaaggtcg cgtaccacag gatggcgatc tgcagcacgc gcacacggcc gatacgatcg
     1801 gcgagcgcac ctgcgatcca gccgccgaac gccgacacca gcaatgtgat ggtcgccagt
     1861 tctcctgcct cggcggtgga gatgtgccac aacgccagca gcgatgggat cacaaatgaa
     1921 tatatttgca catcgagcgc atccagcgac cagccgccga agcaggcgat catggtgcgc
     1981 cgttcgcgcg cggtcaggtc tttcatccag gccaacatcg tcgtctcccc agcgcctctt
     2041 gcgggcgtcc tgacagtgaa gcctctggcg caaaattgat caaggccggg ggctggcatc
     2101 cggtaccgcc agcgctgcaa tggcggcctg atcagcgtgc cgcgttgata tccaatacca
     2161 gtgcggaatg atccgacacg ccaaccgcac gttccacatg cgagtaacga atgtcgccaa
     2221 tgcgccgtgc cagcaaccgc gaggcaaagg cgtggtcaac acgaaatccg ttgccgcgat
     2281 ggctgtacca ggagaactcg cgcccgtcgg gaaaccggtc acgccagaca tcctggaagc
     2341 cggcctccag gattttgtcg aggaacggcg ctgtgcggtc ggtcgcacca ggttcgtcga
     2401 ggaacgcccg gcaggtattg aaatcgccaa tcgccagcgc atgccgcccg gagtgcggcc
     2461 gcgacgcttc gatcagggct tcccagtagg gaattttggc cttcaggttg ggcatgtaaa
     2521 tgccgaacag ccgcacacga tcgatcgtga cacttagcat tcgccatggt tccggcacat
     2581 gttcggtgac atgcgcgatc gatccgggtt tgttgcgtgt ggcgatcagc acgccattgc
     2641 aaatgccggg cggttcgacg gggcttagcc aaaggtaacc ctgatcgcgc
//
LOCUS       DATAVD010001623         3960 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1828336, whole genome shotgun sequence.
ACCESSION   DATAVD010001623 DATAVD010000000
VERSION     DATAVD010001623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3960
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1828336"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2654
                     /locus_tag="VHX39_31220"
     CDS             <1..2654
                     /locus_tag="VHX39_31220"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3995665.1"
                     /translation="LEARFGASLTEKVFASAVVDWERSTDTDALDLALRYASWATLTP
                     AGRAAHRGDTMFRVPKRIDPLHLVPVETIVRDGVTMLRLPEHDWRHRDGFALTDAGMN
                     TQQALDQINYCIWCHTQGKDSCRKGLVDRKTGAFQKSSFGVTLAGCPLDEKISEMHTL
                     RAGGVLIGAFATIAIDNPMMAATGHRICNDCMKACIYQKQEPVDIPQAETRILKDVLA
                     LPWGFEIYSLLTRWNPLDIHRPLPRPDSFRNVLIVGLGPAGFTLAHHLMNDGHTVVAV
                     DGLKIEPLGFDPLLPVRDVETLFENLDDRVMAGFGGVAEYGITVRWNKNYLKLVRLLL
                     ERRAQFAHFGGVRFGGGATMTIDDAWQMGFDHIALCMGAGKPTVLDIPNGLARGVRQA
                     SDFLMALQLTGAAKTSSIANLQLRLPVVVIGGGLTAIDTATESLAYYVRQVEKFAARH
                     AGSAGVKWNEEERLIADEFLAHAAAIAAERAAAAAEGRKPRLAALLDSWGGATIAYRR
                     RLIDSPSYTLNHEEVAKALEEGVRFAEALTPRAVTVDRFGHATALEVTGTDGVAIVLP
                     ARAILVAAGTQPNTVLAREDGRIQLDGRYFQAIDEAGASVTPERGMAKPEVNHVLMHK
                     AGDGRFISFFGDLHPSFFGNVVKAMGGAKRGYPVVSRVLAAAPTPTVSGGDLIARCRN
                     DLVAKVHAVNRLTPTIVEVVVHAPAAARAFRPGQFYRLQNFEMLALRVGPTVLGMEGL
                     AMTGAWTDKARGLVSVIVLEMGGSSDLCAVLKPGEPVILMGPTGTPTEIHGGTTVALV
                     GGGLGNAVLFSIGAATRAAGSKVIYFAGYKQIRDRYKVEEIERAADVIVWCCDEAPGF
                     QPTRPCDRAFVGNIVQAMHAYGSGQLG"
     gene            2667..3023
                     /locus_tag="VHX39_31225"
     CDS             2667..3023
                     /locus_tag="VHX39_31225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995666.1"
                     /translation="MRDATQMIVIGSDRMMSAVGAARHAELAPLLNPAHRAIASINSP
                     MQCMMKEVCAQCLQAHVDPVTGERTVVFSCFNQDQTLDHVDFSVLHERLGQNGTQEKL
                     TAQWIDRALRLAGERV"
     gene            3023..3700
                     /locus_tag="VHX39_31230"
     CDS             3023..3700
                     /locus_tag="VHX39_31230"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEX3995667.1"
                     /translation="MTLPIGPEVDATPRPLPSRTTLRGQYVILEPLHKRHADELWRAA
                     QGADESWTYLPYGPFASQESMLRTITDTASDQTRISWALRPVATGVASGWLSLMDIQP
                     RNAAIELGGIWFGPAMQRTRAATEAMFLPLKLAADDLGYRRLVWKCNSLNAPSKRAAE
                     RLGFSFEGTHRMHMVVKGRNRDSDWYSIIEDEWPSRRDALQTWLAPENFAPDGTMRRS
                     VAEIRGY"
     gene            complement(3694..>3960)
                     /locus_tag="VHX39_31235"
     CDS             complement(3694..>3960)
                     /locus_tag="VHX39_31235"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEX3995668.1"
                     /translation="AACLQIAACIPNFAIQEYPSRTPDLDGGKELLGNDLATGLSEQV
                     GGFIAIPGGPGIGVELVPDVERKFPYRPRPIVMRPHVDGSMVDQ"
BASE COUNT          724 a         1206 c         1276 g          754 t
ORIGIN      
        1 cactggaagc gcggttcggc gcgtcattga ccgagaaagt ctttgcgagt gcggttgtcg
       61 actgggaacg ttccaccgac accgacgccc tcgatctcgc cttacgctat gcctcctggg
      121 ccacgttaac gccggccgga cgcgcggccc atcgcggcga caccatgttc cgtgtgccga
      181 aacggatcga cccgttgcat ctcgttccgg ttgaaaccat cgtccgcgac ggcgtcacga
      241 tgctgcgcct gccggaacac gactggcggc atcgcgacgg tttcgccctg accgatgccg
      301 gaatgaacac gcaacaggcg ctggatcaga tcaactactg catctggtgc cacactcagg
      361 ggaaggattc ctgccgcaaa ggcctggtcg accgcaaaac cggcgcattc cagaagtcgt
      421 cgttcggtgt gacgttggcc ggctgtccgc tcgacgagaa aatcagcgag atgcacacgc
      481 tgcgcgctgg aggcgttttg atcggcgcat tcgccaccat cgccatcgac aatccgatga
      541 tggccgccac cggtcatcgc atctgcaacg attgcatgaa agcctgcatt tatcagaagc
      601 aggagccggt cgatattcct caggccgaga cgcgtatttt gaaagatgtg ctggcgctgc
      661 cctggggttt cgaaatttat tcgcttctga cgcgatggaa cccgctggat attcaccggc
      721 ctctgccgcg cccggacagt tttcgaaacg tgctgatcgt cggtctgggg ccggccgggt
      781 tcactctggc gcatcacctg atgaacgatg gccacacggt ggtggcagtg gacgggttga
      841 agatcgaacc gctcgggttc gatccgctgc tgccggtgcg ggacgtggag acgctgttcg
      901 aaaacctcga cgaccgcgtg atggcggggt tcggcggcgt ggcggaatac ggcatcaccg
      961 tgcgctggaa caagaattac ctgaaactcg tgcgtttact gctggagcgg cgcgcacaat
     1021 tcgctcattt cggtggcgtc cgtttcggcg gcggcgcgac catgacgatc gacgacgcct
     1081 ggcagatggg ctttgaccac atcgcgctgt gcatgggcgc cggcaagccg accgtgctgg
     1141 acatcccgaa cggattggcg cgcggcgtgc gccaggcctc ggatttcctg atggcgctgc
     1201 aactgacggg tgccgcgaag acctcgtcca ttgccaattt gcaactgcgg ctgccggtgg
     1261 tggtgatcgg cggtgggctg accgcaatcg ataccgcgac cgaaagtctg gcctattacg
     1321 tccgccaggt cgagaaattc gccgcccgcc atgccgggtc ggctggtgtg aagtggaacg
     1381 aagaagaacg attgattgcc gatgagttcc tggcccacgc cgctgccatc gccgccgagc
     1441 gcgccgctgc cgcggctgag gggcgcaagc cgcggctggc tgcgttgctg gattcctggg
     1501 gcggcgcgac catcgcctat cgccgccggc tgatcgacag tccgtcctac actctgaacc
     1561 acgaagaagt cgccaaggct ctggaagaag gcgtgcgttt tgccgaggct ctgaccccgc
     1621 gcgcggtgac ggtggatcgt ttcggtcacg ccaccgcgct ggaggtcacc ggcacggacg
     1681 gtgttgcgat tgttttgccg gccagagcca ttctggtggc cgccggcact cagcccaaca
     1741 ccgtgctggc gcgggaagac ggcaggatcc aacttgatgg ccggtatttc caggcgatcg
     1801 acgaagccgg cgcgagtgtc acgccggaac gcggcatggc caagcccgaa gtaaaccacg
     1861 tgctgatgca caaagccggc gatggccgct tcatcagctt cttcggcgac ctgcatccaa
     1921 gcttcttcgg caacgtggtc aaggcaatgg gtggcgcaaa gcgtggctac ccggtggtgt
     1981 cgcgcgtgct ggcggccgcc cccacgccga ctgtctccgg cggtgatttg atagctcgct
     2041 gccgcaacga tctcgttgcc aaggtgcatg cggtcaatcg cctgacgccg acgatcgtcg
     2101 aggtcgtcgt gcatgctccg gccgccgcgc gcgcgttccg gccgggccag ttctaccggc
     2161 tgcagaattt cgaaatgctg gctttgcggg tcggcccaac ggtacttggc atggagggcc
     2221 tggcgatgac cggcgcctgg accgacaaag cgagaggtct ggtcagcgtc atcgtgctgg
     2281 agatgggcgg cagttccgat ctttgcgccg tgctgaagcc gggtgagccg gtgatcctca
     2341 tgggtcccac cggcacgccg accgaaattc acggtggcac gacagtggcc ctggtgggcg
     2401 gcggcctcgg caacgccgtg ctgttttcga tcggtgcagc gacccgggcg gctggttcca
     2461 aagtcatcta tttcgccggc tataagcaga ttcgcgaccg ttacaaagtc gaggagatcg
     2521 agcgcgccgc cgatgtcatc gtctggtgtt gcgatgaggc gccgggtttc cagccgaccc
     2581 gcccgtgcga cagagccttc gtcggcaata tcgtgcaggc gatgcatgcg tacgggtcgg
     2641 gacaactcgg ctaacaggcg gtgccgttgc gcgacgcgac acagatgatc gtgattggct
     2701 cggaccgcat gatgtcagcg gtcggcgcgg cgcggcacgc cgaactggca ccgttgctga
     2761 acccggcgca ccgggcgatc gcctcgatca actcgccgat gcagtgcatg atgaaagagg
     2821 tttgtgcgca atgcctgcaa gcccatgtcg atccggtcac cggtgaacgg accgtggtat
     2881 tttcctgctt caatcaggat cagacgctcg accacgtgga tttttccgtg ctgcatgaac
     2941 ggctgggtca aaacggcacg caggagaaat taacagccca gtggatcgat cgcgcgttgc
     3001 gtttggccgg ggagagagtg tgatgacgtt gcccatcggt cccgaagtcg acgccacgcc
     3061 acggccattg ccgtcgcgca cgacgttacg aggccaatac gtcatattgg aaccattgca
     3121 caaacgtcac gctgacgaac tatggcgggc agctcagggc gctgatgaga gctggactta
     3181 tttgccgtat ggcccgtttg cctcgcagga gtcaatgtta cgcaccatta ccgacaccgc
     3241 ctccgatcaa acccgcatat cctgggcttt gcgtcctgtt gccaccgggg tggcgtccgg
     3301 gtggctctct ttgatggaca ttcaacctcg caatgcggcc attgaactcg gtgggatctg
     3361 gttcgggccg gcgatgcaac gaacccgcgc ggcgaccgag gcgatgtttc tgccgctgaa
     3421 acttgcggcc gacgatctcg gctatcggcg gttggtgtgg aagtgcaatt ctttgaacgc
     3481 gccatcgaaa cgcgcggccg agcgtctggg gtttagcttc gaaggcaccc atcgcatgca
     3541 catggtggtc aagggccgca accgagacag tgactggtac agcattatcg aagacgagtg
     3601 gccgtcccgc cgcgatgcgt tgcaaacctg gctggcgccg gagaatttcg ctcccgacgg
     3661 caccatgcgg cgcagtgtcg cggaaatccg cggctactga tccaccatcg acccatccac
     3721 atgcggccgc atcacaatcg gccgcggccg atatgggaat ttcctttcca catccggcac
     3781 aagttcaacg ccgattcccg gcccgcccgg aatcgcaatg aacccgccaa cctgctctga
     3841 caggccggtg gcgaggtcgt tgccaagcag ttccttgccg ccatcgagat cgggcgtgcg
     3901 tgacggatat tcctgaatgg caaagttcgg aatgcaggca gcaatctgca ggcaggcggc
//
LOCUS       DATAVD010001624         4705 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_158378, whole genome shotgun sequence.
ACCESSION   DATAVD010001624 DATAVD010000000
VERSION     DATAVD010001624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4705
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158378"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            180..332
                     /locus_tag="VHX39_31240"
     CDS             180..332
                     /locus_tag="VHX39_31240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995669.1"
                     /translation="MLLIAAIGYSAWLTSIVFCAANGRWPLLVAAASFFPVGIVHGVG
                     IWLGGW"
     gene            complement(451..753)
                     /locus_tag="VHX39_31245"
     CDS             complement(451..753)
                     /locus_tag="VHX39_31245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995670.1"
                     /translation="MAETTSTRDDDWEQTPAVDPHPTWRPTSEHAEMNAPHRRVSELP
                     PLGYPIGEEAVTHWFEKTFNRTPEVAEVGVILDAMTRRDAEQPITESPSERAFRDR"
     gene            complement(1182..2186)
                     /locus_tag="VHX39_31250"
     CDS             complement(1182..2186)
                     /locus_tag="VHX39_31250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007398257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3995671.1"
                     /translation="MKADAPPLMRLNDLRKSYRLRRGMMDRLRGVQRVVTAVDGISLP
                     IERGTILGLVGESGCGKSTLAQMIVGLLTPSGGTIEWDGNALNTLSGEARRSYRRDVQ
                     MVFQDTHSSLNPRKRIRTILNEAVVARGLRGKAVAGRVSELLDQVGLDVQLLGRFSHE
                     LSGGQRQRIGIARALAMEPSLLVADEPVSSLDVSLQGQIINLLRELNKTLGLTIVLIS
                     HDLAVVGRICDRITVMYAGRVVESGDPAAVLTSPRHPYTQALLDAVPRGLERRERRRS
                     VLPVETAETAGGCRFRPRCLHSTEACAERVPALETVGQHHEAACLLVGEKQGVDAPGG
                     "
     gene            complement(2183..3160)
                     /locus_tag="VHX39_31255"
     CDS             complement(2183..3160)
                     /locus_tag="VHX39_31255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3995672.1"
                     /translation="MTEDLLRIEGLHVGFRSGDAMRSVVRGVDLRIAPGEVVGLVGES
                     GSGKSMTALAIMRLLPPGGAVTSGRISFRGQDLREYSAGELNTLRGKQIGMIFQDPLT
                     ALNPAIPIGRQLQDAIRTHLKLGRRAAMARAEELLALVGIPYPRQRLLAYPHELSGGM
                     RQRVMIALAVSCNPSLLIADEPTTALDVTVQAQVMDLLDRIRSEFGIAILFISHNLEL
                     VAEISTRVTVMYAGRVVESGDVRALFASPRHPYTRQLLRCIPRLDGSRDAMPTIPGLP
                     PKIGALPPGCPFAPRCDLAEPGCSAEEPPIRWHDRQMAVCFRADEMAPA"
     gene            complement(3157..4041)
                     /locus_tag="VHX39_31260"
     CDS             complement(3157..4041)
                     /locus_tag="VHX39_31260"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3995673.1"
                     /translation="MIRRITALFGGTGGFIGAILVLLIAADGLAAPLIAPYDPLAVDM
                     TASLLPPGPGHLFGTDQAGRDVLSRVIWGGRASLEVSVLAMVIGCVGGVSLGLVAGFF
                     SGGWLEQLLMRVLDAMAAIPLLIWAIALVGILGVGPFTVAGITFGNEVKLLVLLGVLY
                     IPTLARITYAGALAESQANYVAARRLQGVGPLRIMISDVLPNCLSPVIVQATLLLAIG
                     IIIEASVSFVGLGVQPPNPSWGNMLADARNYLFSGEWWLSVFPGAAISLSVVAFNLLG
                     DGLRDALDPRHTAQALTA"
     gene            complement(4038..>4705)
                     /locus_tag="VHX39_31265"
     CDS             complement(4038..>4705)
                     /locus_tag="VHX39_31265"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3995674.1"
                     /translation="LPVTLELVVVAFVFSCVLSILAGTLSALLRDTALDYGTRLIAVL
                     GVSVPGFWLALVLIMAFAVDRDWFPPGGVAPWSAGVLHHLDSIALPTFCLGIFYMAVL
                     SRMTRSSMLEVLGQDYMRTARATGLPRRRILVYALRNALVPVVTVAGMSFGYMFGWAL
                     IIEAVFNISGLSGALLTAIQQRDFALVQGIVMVFTFIFILANIVSDLTNVWLNPRIAA
                     VRT"
BASE COUNT          957 a         1538 c         1416 g          794 t
ORIGIN      
        1 aatccgccgc agccgacggg atagggttgc aaaagccata gcgggtgacc aaacgcgaat
       61 ccgagggtga tccagacgga aatattccaa gctgacccag ctggggatgc tgcagccaga
      121 tagaggtgta gatgcgtata gcccggctag gcgccatgga cgttcagact gcggtggggt
      181 tgctgctgat cgccgccatc ggctactcgg cgtggctcac atcaatcgtc ttttgcgccg
      241 cgaacgggcg ctggccgctt ctggtcgcgg ctgcatcatt ttttccggtc ggcattgtac
      301 acggtgttgg tatctggctc ggcggatggt gacaccaaac ggcggcgggg cgattgcgga
      361 aaagatggga gcgggcgcct gtccgcaccg aggtggatga ctcagtgtcc ctatgcgtcg
      421 ccggcatagg cttcacgcgc ctgcggtcat ttacctgtcc cggaatgccc gttcagaagg
      481 tgattcggtt attggctgct ctgcatcccg ccgggtcatt gcatccagaa tgacgccgac
      541 ttccgccacc tcgggggtcc ggttgaatgt tttctcgaac cagtgcgtta cagcctcctc
      601 gccgatcgga tagccaagcg gcggcaactc gcttacccta cgatgaggcg cattcatttc
      661 cgcgtgctcg gatgtcggcc gccaagttgg atgaggatcg actgcgggcg tttgctccca
      721 gtcgtcgtct cgggtggaag tcgtctctgc catggtttgc tccttccgtg cgtctatgga
      781 aaagagcgcg ggagacgctg ccaggttgcg gcatccagag ttattgatgc gcgaacttct
      841 atccgctgcc tcaatacgcg tcggcgtccc aaatcggccg cgtcagaccg tcaacgtagg
      901 ggagagcgac cccaatcgaa ggtagaaatt tcaccaaagt caattgccat gtatttgcat
      961 gcggcatgcg ctggggagag cgatcgttgt ggatccatgc ctctttgccg actgcggcca
     1021 cggtggttgc tttggcaatg cggcctgatc ggcggacttt ggctttaggg gccaaggtca
     1081 cgaagccgtt tacgcagagg atcagacacg cccccctgtc tccttgaaac taactggtca
     1141 agccggaaac cgtccgccag gacaggtcaa tcccacggcc tctacccacc aggcgcatca
     1201 acgccctgtt tctccccaac caacaaacac gccgcctcgt ggtgctgccc gaccgtctcc
     1261 agcgccggca cgcgttcggc acaggcctct gtcgaatgca ggcaccgcgg ccgaaatcgg
     1321 cacccacccg ccgtctcggc tgtttccacc ggcaacaccg agcgccggcg ctcccgccgt
     1381 tccagcccac gcggaacggc atccagcagc gcctgcgtgt acgggtgtcg cggcgacgtc
     1441 agcaccgccg ccgggtcacc gctctccacc acccggccgg cgtacatcac tgtgatccgg
     1501 tcgcagatcc gccccaccac ggccagatcg tgactgatga ggacgatggt caaccccagg
     1561 gtcttgttca actcccgcaa caggtttatg atttgaccct gcaacgacac gtccagcgag
     1621 gaaaccggtt catccgcgac cagcagcgac ggctccatcg ccagtgctcg ggcaatgcct
     1681 atgcgctgcc gctggccgcc cgaaagttcg tgcgagaaac gacccagtaa ttgaacatcc
     1741 agccccacct ggtccaatag ttcgctgacc cggccggcaa cggctttccc gcgcaggccg
     1801 cgcgcaacga cagcctcgtt caggatcgtg cggatacgct tgcgggggtt cagcgatgag
     1861 tgcgtatcct gaaacaccat ctgcacgtcg cgccgatatg atcgcctcgc ttcaccggac
     1921 agtgtgttca gtgcgttgcc gtcccattcg atcgttccgc cggatggcgt cagcaacccg
     1981 acgatcatct gcgccagcgt ggatttcccg cagccgctct cgccgaccaa ccccaggatg
     2041 gtgccgcgtt cgatcggcag cgaaatgcca tcgacggcgg tgacgacgcg ctgcacgccg
     2101 cgcagccgat ccatcatccc acgccgcagt cgatacgatt tccgcagatc gttcaaccgc
     2161 atcagtggag gcgcgtccgc cttcatgccg gcgccatctc gtcggcgcgg aagcagaccg
     2221 ccatctgccg gtcatgccat cggatgggcg gctcttctgc cgaacaacct ggttcggcca
     2281 ggtcgcaacg cggcgcgaac ggacatcccg gcggcaacgc accaatcttc ggtggcaatc
     2341 ccggaatggt cggcatcgcg tcgcggctgc catcgaggcg cggaatacag cgcaacagtt
     2401 gccgcgtata gggatgccgc ggcgaggcga acaacgcgcg cacgtcgccg ctctcgacga
     2461 cgcgtccggc atacatcacc gtgacccggg tcgagatctc ggcaacaagt tcgaggttat
     2521 gactgatgaa caggatcgcg atcccgaatt cggaacgaat ccgatccagc aggtccatca
     2581 cctgcgcctg caccgtcaca tcaagcgccg tggtcggttc atcggcgatc agcaggctgg
     2641 gattacacga tacggcgagt gcgatcatca cccgctggcg catgccaccg gacaattcgt
     2701 gtggatacgc caacaatcgc tggcgcggat acggtatgcc aaccagtgcc agcagttcct
     2761 ccgcccgagc catggcggct cggcggccca gcttcaggtg ggtgcggatg gcatcctgca
     2821 attgccgccc gatcggtatt gccgggttga gcgcggtcaa cgggtcctgg aagatcatgc
     2881 cgatctgctt gccgcgcagc gtgttcaatt cgccggccga gtattcgcgc agatcctggc
     2941 cgcggaacga tatccggccg ctggtcactg ctccacccgg aggcagcaaa cgcatgatcg
     3001 ccagcgccgt catgcttttg ccggacccgg actcgcccac cagcccgacg acctcgccgg
     3061 gcgctatgcg caggtccaca ccgcgcacca ccgaacgcat tgcgtcaccg gatcgaaaac
     3121 caacgtgcaa tccttcgatg cgcagcaggt cctcggtcat gcggtcagcg cctgtgcggt
     3181 atgccgaggg tccagcgcgt cacgcagccc gtcgcccagc aggttgaacg ccaccacgct
     3241 cagcgaaatc gccgcgccag ggaacaccga cagccaccat tcgccggaga acaaatagtt
     3301 gcgggcatcg gcgagcatgt tgccccagct tgggtttgga ggctgcacgc ccaggccaac
     3361 gaaactgacg gaggcttcga tgatgatgcc gatcgccagc agcagggtcg cctggacgat
     3421 gaccggcgac aggcagttgg gcagcacgtc ggagatcatg atacgtaacg gtcccacccc
     3481 ttgcagccgt cgcgcggcga cgtagttcgc ctgggattcc gcaagcgcgc ctgcgtaggt
     3541 gatgcgggcc agggtcggta tatacagaac gcccaacagc accagcagct tgacttcgtt
     3601 accaaaggtg atgccggcga cggtgaacgg gccgacaccc aggataccga caagggcgat
     3661 tgcccagatc agcaacggaa tcgccgccat cgcgtccagc acccgcatca gcagttgttc
     3721 cagccacccg ccgctgaaga accctgccac cagcccgagg gacacacccc ccacgcatcc
     3781 gatgaccatg gccagcacgg aaacctccag cgaggcgcga ccaccccaga tgacgcggct
     3841 gaggacatcc cggccagcct ggtcggttcc gaacagatga cccggtccgg gtggcagcaa
     3901 tgacgcggtc atatcgacgg ccaacggatc gtacggtgcg atcaacggcg cggccaggcc
     3961 gtcggcagcg atcagcagca ccaggatggc gccgatgaaa ccgccagtgc cgccgaacag
     4021 cgccgtgatg cggcggatca tgtcctgacc gccgcgatgc gcggattgag ccagacattc
     4081 gtcagatccg acacgatatt ggcgaggatg aaaatgaatg tgaacaccat gacgatcccc
     4141 tgcaccaagg caaaatcgcg ttgctggatg gcggtgagca aagccccgga caggccgctg
     4201 atgttgaaga cggcttcaat gatcagcgcc cagccgaaca tgtagccaaa ggacattccg
     4261 gcgaccgtta ccaccggaac cagcgcattg cgcagcgcat agaccagaat gcgccggcgc
     4321 ggcagaccgg tcgctcgggc ggtgcgcatg tagtcctggc ccagcacctc cagcatgctg
     4381 gagcgagtca tccggctgag taccgccata tagaaaatgc cgaggcaaaa cgttggcagg
     4441 gcgattgaat caagatggtg caatacaccc gctgaccaag gggcgacacc gccgggcgga
     4501 aaccaatccc gatccaccgc gaatgccatg atcaacacca gagccagcca gaaccccggc
     4561 acggaaacac ccagcactgc gatcaggcga gtgccgtagt cgagcgcggt gtcgcgcaac
     4621 aatgcggata gcgtgcccgc aagtatcgac agcacgcagg aaaagacgaa tgccacaacg
     4681 acgagttcca gtgtcaccgg caatg
//
LOCUS       DATAVD010001625         3073 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2761119, whole genome shotgun sequence.
ACCESSION   DATAVD010001625 DATAVD010000000
VERSION     DATAVD010001625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3073
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2761119"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1187)
                     /locus_tag="VHX39_31270"
     CDS             complement(<1..1187)
                     /locus_tag="VHX39_31270"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3995675.1"
                     /translation="MRILRKTLSVATILAVGASLAAAPVRAQPVPGVTPGVTKDQITI
                     GSFGSLTGPTYLYGKLTMNGVDAVFAKVNAAGGINGRKLVLVREDDRCDPATAIAAVK
                     KLVFSENVFAIIGGGCSNAALGARPEIIKDQIPTIIFASVADEITEPVSKYIYTTMTT
                     ASIESRAQVEYAIEHGAKKIAIVAQHDAWGQSRYKPLMAALAKHNITPVVDLEMTVDD
                     NDATVQALKVGQAGADAIIMELYAKPGAVLVRALNKLGQNPMLIGETGIADPVAFTKQ
                     VDIPGATDKFVTPSAVRYTTTSPEVKDWTAEIKKLFPNDDLSVFNIMGIGSGQVLVAA
                     LQKAGPDLTREKFLDALAHINVTTDTYAAPIVCNDPVSHQCNQHVAWMKAAGDHAEML
                     AAKG"
     gene            complement(1279..>3073)
                     /locus_tag="VHX39_31275"
     CDS             complement(1279..>3073)
                     /locus_tag="VHX39_31275"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX3995676.1"
                     /translation="DEVAENFTRVAQSWGSEAVWPYHSGGTMGLLQRYGIDRLRNAMR
                     YSRQQTTICVTPAQSGWLAGVGKMNGSDPREMAESDLIVVWGGNPVSTQVNAMVHIAR
                     ARKRGAKLVVIDVYATPTAQAADVALILRPGTDAALACAVMHILLAEGMADRDYLARH
                     TDFGPDVEAHLAGWTPERAASITGLTVEQITSFARLYGSTRRSFLRPGFGFTRSRNGS
                     AAMHAVSCLPAVTGAWRERGGGGFFLNIDWGLDTTVAHGIDMLDPAIRVLDQSRIGPV
                     LCGDPADLKGGPPVMAMLMQNANSANVAGDSRTVRRGLSREDLFLCVHEQFPTATAQY
                     ADILLPAATFLEYDDLYYGLGHTHINVGLAVLDRYEDTRTNHEVIAGLAKRLGCEQPC
                     FTMTACELLDLTLRQSGRGTLGEAAERGWIDCAPGFEDGHFLNGFAHPDGLFHFKPDW
                     SKIGPEHDAMPSMPDHMMSYEAATQDHPFRMVAPPARSFLNTSFTETPGSRAREGEPR
                     ALLHPDDATMLGLSDGDHVSVGNRRGELTLPIRRFPGVQRGVIIVEGIWPNTAFAGAM
                     GVNQLIGADRVPPNGGTAFHDTAVWLRPVAV"
BASE COUNT          537 a         1008 c          978 g          550 t
ORIGIN      
        1 cccttggcgg caagcatttc cgcgtggtcg ccggctgcct tcatccaggc gacatgctgg
       61 ttgcactggt gactgaccgg gtcgttgcac acgatcggcg cggcataggt atccgtggta
      121 acattgatat gcgccaacgc atcgaggaac ttttcgcgcg tcaggtcggg cccagccttc
      181 tgcagtgccg cgaccagcac ctgcccggat ccgatgccca tgatgttgaa caccgacagg
      241 tcgtcgttgg ggaacagctt cttgatctcg gccgtccaat ccttcacctc gggtgaggtg
      301 gtggtgtaac gcaccgccga cggggtgacg aacttgtcgg tggcccccgg gatatcgacc
      361 tgcttggtga aggcaaccgg gtcggcgatg ccggtctcgc cgatcagcat cggattctgg
      421 cccagcttgt tcagcgcgcg caccaggacg gcgcccggct tggcatacag ttccatgatg
      481 atggcatccg ccccggcctg cccgaccttc aacgcttgca cggtggcgtc gttgtcgtcc
      541 acggtcattt cgagatcgac gacaggggtg atgttgtgct tggccagcgc tgccatcagc
      601 ggcttgtagc gggactggcc ccaggcatca tgctgcgcca cgatcgcgat cttcttcgcc
      661 ccatgctcga tcgcatactc aacctgcgct cggctttcga tcgaggccgt cgtcatcgtc
      721 gtatagatat atttgctgac aggttcggtg atttcatccg caacggaagc aaaaatgata
      781 gttggtatct ggtccttgat gatttcaggc cgagcgccga gggcggcatt ggaacagccg
      841 ccaccgatga tggcgaagac gttttcggag aacaccagct tcttcaccgc ggcgatggcg
      901 gttgccggat cgcaacggtc gtcctcgcgc accaggacca gcttgcggcc gttgatgccg
      961 cccgccgcat tgaccttggc gaacacggcg tcaacgccgt tcatcgtcag cttgccatac
     1021 agataggtcg gcccggtcag tgagccgaag gacccaatcg tgatctggtc cttggtcacg
     1081 ccaggggtca cgccaggcac gggttgcgca cgcacgggtg ccgcggcaag cgaggccccc
     1141 acggccagaa tggtcgccac gctcaatgtc ttgcgcaaaa ttctcatttc cccgctccac
     1201 tcattgtcgc ggaattcacc cacggaccgg gaattgacag gcaaagcgtg tgccagcccg
     1261 tggtcaggcg tacgaaaatc agacagcgac cggccgcagc cagacggccg tatcatgaaa
     1321 agcggtgccg ccgttcggtg gcacacggtc ggcgccgatc aactggttga cgcccattgc
     1381 cccggcgaag gcggtgttgg gccagatccc ctcgacgatg atgacgccac gctgcacgcc
     1441 gggaaaccgc cggatcggca gcgtcaactc gccgcgccgg ttgccgacgc tgacgtgatc
     1501 gccgtcgctc agccccagca tcgtggcgtc atcggggtgc agcagcgcgc gcggttcacc
     1561 ttcccgtgcg cgcgatcccg gtgtctcggt gaagctggtg ttcaggaagg agcgcgcggg
     1621 cggtgcgacc atacggaacg gatgatcctg ggtcgcggcc tcgtacgaca tcatgtggtc
     1681 cggcatcgac ggcatggcgt catgctcggg gccgattttg ctccagtccg gtttgaagtg
     1741 gaacaacccg tccggatggg cgaagccgtt gaggaaatgt ccgtcctcga agccgggcgc
     1801 acaatcgatc cagccgcgtt ccgccgcttc gccgagcgtg ccgcgaccgg attgccgcag
     1861 cgtcaaatcc agcaactcgc aggccgtcat cgtgaaacag ggctgctcgc agccgaggcg
     1921 tttggcgagg cccgcgatca cctcgtggtt ggtgcgcgtg tcctcatagc ggtccagcac
     1981 ggcgaggccg acattgatgt gggtgtgacc aaggccgtag tacaggtcgt cgtattccag
     2041 gaatgtcgcg gccggcagca ggatatcggc gtattgcgcg gtcgcggtcg gaaactgctc
     2101 atgcacgcac aggaacagat cctcccgcga caggccgcgc cgcaccgtcc ggctgtcgcc
     2161 ggcgacgttg gcggaattgg cgttctgcat cagcatcgcc atcaccggcg ggccgccctt
     2221 cagatcggcc gggtcgccgc acaggaccgg accgatgcgt gactgatcca ggacgcggat
     2281 ggccgggtcc agcatgtcga tcccgtgcgc gacggtggtg tccaggcccc agtcgatgtt
     2341 gaggaagaag ccgccgcccc cacgctcccg ccaggccccg gtgaccgccg gcagacagct
     2401 cacggcatgc atcgccgcac tgccgttgcg cgagcgcgtg aagccaaatc ccggccgcag
     2461 gaaactgcgc cgcgtggaac cgtaaagccg agcaaagctg gtaatctgct cgaccgtaag
     2521 cccggtgatc gacgcggccc gttccggcgt ccagccggcg agatgggcct cgacgtcggg
     2581 accgaaatcg gtatggcgcg ccagatagtc ccgatcggcc atgccctcgg ccagcaggat
     2641 atgcatcacc gcgcacgcca gcgcggcatc ggtgcccgga cgcaggatca gcgccacatc
     2701 cgcggcctgc gcggtgggcg tcgcatagac gtcgatcacc accagtttcg ccccacgctt
     2761 ccgcgcccgc gcgatgtgta ccatcgcatt gacctgggtc gagaccggat tgccgcccca
     2821 caccacgatc agatccgact ccgccatttc ccgcgggtcg gaaccgttca tcttgcccac
     2881 accggcaagc cacccggact gcgccggcgt tacgcagatc gtcgtctgct gacgggagta
     2941 acgcatcgcg ttgcgcagcc ggtcgatgcc gtagcgttgc agcaagccca tcgtgccgcc
     3001 cgaatgatag ggccagacgg cttcgctgcc ccagctttgg gcgacacggg tgaaattctc
     3061 ggcgacctca tcc
//
LOCUS       DATAVD010001626         2939 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2947679, whole genome shotgun sequence.
ACCESSION   DATAVD010001626 DATAVD010000000
VERSION     DATAVD010001626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2939
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2947679"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..194
                     /locus_tag="VHX39_31280"
     CDS             <1..194
                     /locus_tag="VHX39_31280"
                     /inference="COORDINATES: protein motif:HMM:NF024934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3995677.1"
                     /translation="DYGVASTHGIRIGLKLSQKNLGTLAGGSREKVNKQLRRWEEDGI
                     IQKFDGHVVILRPNALQQS"
     gene            complement(337..2898)
                     /locus_tag="VHX39_31285"
     CDS             complement(337..2898)
                     /locus_tag="VHX39_31285"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEX3995678.1"
                     /translation="MRWRTILVIAFGLLVVMPIAGIGIFIATFNPNSWKPSIQNAVLR
                     ATGRELSLNGPISVKWSLVPTIEARDVALANIDGGSRPQMATAQSIEAEVALLPLLSN
                     RIEIARLVMINPDVLIETTQTGRTNWAFTGLATPNATSATATTPGRPMIIEVASLAAK
                     DAMLTWRDGITGQSATGTLNSFELLEPSETSPTSFQFDATYAGTRFQAKGETGSISRL
                     RDSGAKAPWPVKLEVSSNTTALSVDGKFTTPLDPTSFSGKTSGRLPDLVLLQPLFPGV
                     TLPPVQDLSFSLSVSDSGLPLARITSFSLHAGASDLSTFAPGLRLTQADISAPQIDQP
                     ITVQAAGTYADAPLTIAATLGALNALIGGQPFPVDASFALAGSTATAKGTLADPANIA
                     GAELAVSAHIPALAPFAALLRQSLPDAKNVTFDARLAESQGGFVKGIKLRQAMLTLPQ
                     GDIAGDGSFGFTQPPSITGNVTSKRIDLEALLEMKWINPPVPPATLQAQSEPAKPPQP
                     EQRGNPNLLFSDASLDLGVLHNADAVVQLHIGELETRNEIYRDIDGHLVLKGGNLVLD
                     PINGTLPAGKMSGRLTIDANPPKPPVMLVLHAPGLSVHALALMLGLPSDALGSLEVDA
                     NLNGAGDSLHAIAAALNGTLGLAMVNGEIDNAYLNRVLGPILTSASLPLSLIFPGQII
                     GGHSALRCFAARLDAHDGLATFRALYLDAARVKVTGNGTINLADEALALRLRPLGRLA
                     DTGITVPLIVGGTIEHPQARVDAANAAQANIEGLARSAQNLAELPLGEISGALGGPDR
                     LGGGGDHCTDQLAIARGRPGGPQPNAPPSILTVPADDAKQILSAPKNLLRDLFGK"
BASE COUNT          582 a          892 c          901 g          564 t
ORIGIN      
        1 acgattacgg tgtcgcgagc acgcacggga tccgaattgg actgaaactc tcacaaaaaa
       61 acctgggcac actggccggt gggtcacgag aaaaagtcaa caaacagctt cgccgttggg
      121 aagaagacgg catcattcag aagttcgacg gacacgttgt aatcttgcgc ccgaacgcgt
      181 tgcagcaatc atagcggtcc gcgtcagttg tgaccgcgag gatttgcgca acattttgcg
      241 ccgaggtgaa tgtccgcttc gacgtgcagc tttcagcgca gacgaatgga gcgcctctca
      301 agtgtaatct cagcgattgg aacctcatcg tcccaatcat ttgccgaaga gatcccgcag
      361 cagattcttg ggagcactaa ggatctgctt cgcgtcatca gcgggcaccg tcaggatcga
      421 tggcggcgca tttggctgcg gacctcctgg cctgccgcgg gcgattgcga gttgatcggt
      481 gcaatgatcg ccgccgccgc cgagccgatc ggggccgccg agtgcgccgg agatctcgcc
      541 aagcggcaat tcggccaaat tctgcgccga ccgtgcgagg ccctcgatgt tggcctgtgc
      601 cgcattcgca gcatcgacgc gcgcctgcgg atgctcgatc gtcccgccga cgatcagcgg
      661 cacagtgata ccggtatcgg caagtcgccc cagcggccgc aaacgcaggg caagcgcctc
      721 gtcagcgaga ttgatcgtgc cgttgccggt taccttcacg cgcgcggcat cgagatacag
      781 cgcacggaac gttgccagcc cgtcatgcgc gtccagccgt gccgcaaagc agcgcagcgc
      841 actgtgtccg ccgatgatct gaccagggaa gatcagcgat aacggcaagc tcgccgaggt
      901 cagaattggc ccgagcacac ggttgagata ggcgttgtcg atttcaccgt tcaccatcgc
      961 cagcccaagc gttccgttca gtgctgcggc gatcgcatgt aggctatcgc cggcgccgtt
     1021 gagattggca tccacttcaa gcgagcccaa agcatctgac ggcagcccga gcatcagcgc
     1081 cagcgcgtgc accgacagac cgggcgcgtg cagcacaagc atcaccggcg gcttcggtgg
     1141 attggcatcg atcgtcagcc gcccgctcat ttttccggcg ggaagtgtcc cgttgatggg
     1201 atcgagcaca agattgccgc ccttgagcac caaatgtccg tcgatgtcgc gatatatttc
     1261 gttgcgggtt tccagttcgc caatgtgcaa ctgcacaacc gcatcggcgt tgtgcaggac
     1321 gccgagatcg agcgacgcgt ctgagaacag caaattcgga ttgccgcgct gctccggctg
     1381 cggcggtttg gctggctccg actgcgcctg cagcgttgca ggcggcacgg gcggattgat
     1441 ccacttcatt tcgagcaggg cctcgagatc gatccgcttc gacgtcacgt ttccggtgat
     1501 cgacggaggc tgcgtaaacc caaacgaccc gtcgccggcg atatcgccct gcggaagggt
     1561 cagcatcgct tgccgcagtt tgatgccttt gacgaacccg ccctgtgact cggcaaggcg
     1621 cgcatcaaaa gtcacgttct tcgcatcagg cagcgactga cggagcagcg ccgcaaaggg
     1681 cgccagcgct gggatgtgcg cgctcactgc aagttcggct ccagcaatat ttgctggatc
     1741 ggccagcgtg cccttcgcag tcgcggtaga ccctgcaagc gcaaacgaag catccaccgg
     1801 gaatggctgc cctccgatca gcgcattcaa cgcaccgagt gtcgctgcga tggtcagcgg
     1861 tgcatcagca taagtgcccg cggcttgcac ggtgattggc tgatcgattt gtggcgccga
     1921 aatatctgcc tgtgtcagcc tcaaccccgg tgcaaaggtg gacagatctg acgccccggc
     1981 atgcagtgaa aaactggtga tccgagccag cggcagtccg ctgtcggaga cactgaggct
     2041 gaagctcaaa tcctggactg gcggtagcgt cacgccggga aacaacggtt gaagcagcac
     2101 aagatctggc agcctaccgc tggtcttgcc ggagaagctg gtcgggtcca ggggcgtcgt
     2161 aaattttccg tccacggaaa gcgctgttgt gttggaactg acctccagct tcaccggcca
     2221 cggcgccttc gccccgctat cgcgcagccg cgatatggaa ccggtctcgc ccttcgcctg
     2281 gaaccgggtt ccggcatagg ttgcatcgaa ctggaacgac gttggagacg tctcgctcgg
     2341 ttccagcaat tcaaaagaat tgagtgtgcc ggtggcactc tgtccggtga tgccgtcgcg
     2401 ccaggttaac atggcatcct tggccgcgag cgatgcaacc tcgatgatca tcggccgccc
     2461 aggcgtggtg gcagttgctg aagtggcgtt cggcgtggca agtccggtaa aagcccagtt
     2521 ggtgcgaccg gtctgagttg tctcgatcag aacgtccggg ttgatcataa ccagccgagc
     2581 aatctcgatg cggttcgaga gcagcggcag caaggccacc tccgcctcga tgctttgcgc
     2641 ggttgccatt tgcggtcggg agccgccgtc gatgttggca agcgccacgt cgcgtgcctc
     2701 gatcgttggc accagtgacc atttcaccga gattggacca ttcagcgaca gttcgcggcc
     2761 ggtcgcgcgc aacaccgcat tctgaatgct cggtttccag ctgttcggat tgaacgtcgc
     2821 aatgaaaatg ccgatgcctg cgattggcat gacaaccagc aagccgaaag cgattaccag
     2881 gatcgtgcgc cagcgcatgg ccaatccctc cctgtcgtgc ctgccgcgtc ggcagctta
//
LOCUS       DATAVD010001627         3034 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1828705, whole genome shotgun sequence.
ACCESSION   DATAVD010001627 DATAVD010000000
VERSION     DATAVD010001627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3034)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3034)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3034
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1828705"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..376)
                     /locus_tag="VHX39_31290"
     CDS             complement(<1..376)
                     /locus_tag="VHX39_31290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEX3995679.1"
                     /translation="MRFGSLVAAFWLVLGSAVMAQGQPPAAGSSPTPLVSRGNDGVVG
                     VITGMEGGTYARTGADLTILDDPSLRVLPTLGKGSLQNLSDILFLRGIDIGFVQADAL
                     AYAKQHNMFPGLTQNIRYIAKLY"
     gene            811..2454
                     /locus_tag="VHX39_31295"
     CDS             811..2454
                     /locus_tag="VHX39_31295"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3995680.1"
                     /translation="MPDVMERDISAANTSLPSQLDAIVVGGGLGGLYALYRLRKLGMT
                     AHAFEAGSGVGGTWFWNRYPGARCDVESMEYSYAFDDDLQQEWTWPERYGTQPEILRY
                     INHVADRFDLRRDVVLNTRVVSAEFDPADCLWTVRTDKGDVVRAPFCIMATGNLSTPR
                     VPDFVGIARFKGQWYHSGLWPHEGVDFSGLRVGVIGTGSSGVQMIPLIAQQAKHLHVF
                     QRTANFSLPARNGPMDPDIEATHKSEYLARRAAAYETPFGIAGFPPPVKSALEATAEE
                     RDAKYEAKWAEGGSISFLYSYNDLLVNKASNDTASEFVRDKIRSIVRDPAVAELLAPK
                     DHPIGTKRLCLDTNYYETYNRDNVTLVDVRSSPIREITERGVTTGDAEYELDAIVFAT
                     GFDAMTGALREIDIRVGNGPTLAEKWEGGPLTYLGLMVAGFPNMFTITGPGSPSVKTQ
                     MIVAIEQHMDWIGDCLAAMRARGMRRIEPRPEAERDWVQHVNDVADSTLYPLANSWYM
                     GVNIPGKPKVFMPYVGGFAGYKKKCDAVAANQYEGFVIS"
     gene            complement(2451..>3034)
                     /locus_tag="VHX39_31300"
     CDS             complement(2451..>3034)
                     /locus_tag="VHX39_31300"
                     /inference="COORDINATES: protein motif:HMM:NF018829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MlrC C-terminal domain-containing protein"
                     /protein_id="HEX3995681.1"
                     /translation="CDNSASGGTMDTTTVLAEIMRQGLEDVVFFGIYDPDAVQAAMRA
                     GVGATVELRIGGRMQMPTIPGDNEPLLVRGRVRTLSAGYFVSESPMRAGVAVTMGPMA
                     VLDTGKVEIVLISRHAEPSDLGLFKVVGIDPAKKRYVAIKSRVHWRADLGSLAKHVVE
                     CNGLGVCTSDYDILKFEQVRRPIYPLDLVNQRA"
BASE COUNT          615 a          892 c          958 g          569 t
ORIGIN      
        1 cgtaaagctt ggcgatgtag cggatgttct gggtcaggcc cgggaacatg ttgtgctgct
       61 tcgcataggc gagcgcgtcg gcctgaacga agccgatgtc gatgccccgg aggaaaagga
      121 tgtcggacag attttgcagc gaccccttgc cgagggtcgg cagtacccgc aacgagggat
      181 cgtcgagaat ggtcagatct gcgccggtgc gagcataggt gccgccctcc atgccggtga
      241 tgacgccaac gacgccgtca ttgccacgag aaaccagagg cgtcggcgaa ctgccagcgg
      301 ctggcggctg tccctgggcc atgacggcac tgccgagcac caaccaaaat gcagcaacga
      361 gcgagccaaa ccgcatggga attccccctt atccaagctg cgaaattctt cggattcaat
      421 gcgttctgtc ccacgccgaa gaaccgcttt cctggtagga taattatacg tttcatcaca
      481 ggttcaggcc agcgataatt cacattcggt caatcaaacg gtgcggcaac gcaaatccgc
      541 agttctgcag caaacgaagg cgcgtgccac gcatcgccgg gccgccgtag ttcctgcatt
      601 ctgcaagccg ccggtgtgga acagtcggtt ccacgacggg cacgtggcag ggaaatccag
      661 gacagtgcga gggaagcctt cgcaccgttt tgtcgcctcc agatgaaaat ccattggcgc
      721 cgcgccaccc gacgccaacc tgtgcgcggg ttggcgatcg gcgccgggcg tgctttgact
      781 cgcattccga tcagcgagag gcgcatcgac atgccggacg taatggaacg ggacatttcc
      841 gcggccaaca ccagcctccc ctcccaactc gacgccattg tcgtcggtgg tggactgggc
      901 gggctctacg cattgtatcg gctgcgcaaa ctgggaatga cagcgcatgc gttcgaggcg
      961 ggatcagggg tcggcggtac ctggttctgg aaccgctatc caggtgcgcg ctgcgacgtt
     1021 gagagcatgg aatattccta cgccttcgac gatgacctgc agcaggaatg gacgtggccg
     1081 gagcggtacg gcacgcagcc cgaaatcctt cgctatatta atcatgtcgc ggatcggttc
     1141 gatctgcgcc gcgatgtggt gctgaacacg cgcgtggtat cggccgagtt cgatccggcc
     1201 gattgcctgt ggacggtgcg caccgacaag ggcgacgtcg tccgcgcgcc gttctgcatc
     1261 atggcgaccg gcaatctgtc aacgcctcgg gtgccggact ttgttgggat cgcgcggttc
     1321 aagggccaat ggtaccacag cgggctttgg ccgcatgagg gcgtggactt ctccggttta
     1381 cgggttggcg tgatcggcac cgggtcctcc ggcgtgcaga tgatcccgct gatcgcgcag
     1441 caggcgaagc acttgcacgt gttccagcgc acggcgaatt tcagcttgcc ggcgcgcaat
     1501 gggccgatgg atccggacat cgaagcgacg cataagtccg aatatttggc ccgccgcgcg
     1561 gcggcttatg agacgccgtt cgggatcgcg gggtttcctc caccggtgaa gtcggcactg
     1621 gaggcaaccg cagaagaacg cgacgcaaaa tacgaagcaa aatgggccga gggcggcagc
     1681 atcagttttc tttattcgta caacgacctg ctggtgaaca aggcgtcgaa cgataccgcg
     1741 tcggagttcg tgcgcgacaa gatccgttcg atcgtgcgtg atcctgcggt cgcggaactg
     1801 ctggcaccta aagatcatcc gatcggtacc aaacgtctgt gtctggatac caattattac
     1861 gagacctata accgcgataa cgtgactctg gtggatgtgc gaagcagccc gatccgggaa
     1921 atcaccgagc gtggggtgac gaccggcgat gccgagtacg aactggacgc aatcgtgttt
     1981 gccacaggtt tcgacgcaat gaccggcgca cttcgggaaa tcgacattcg agtcggcaat
     2041 ggcccaaccc tggcggagaa atgggagggt gggccgctga cctatctcgg gctgatggtg
     2101 gcgggatttc cgaacatgtt caccatcacc gggcctggca gtccgtcagt aaagacgcag
     2161 atgatcgtgg cgatcgagca gcacatggac tggattggcg actgtttggc ggcgatgcgc
     2221 gcccgcggca tgcggcggat cgagcccagg ccggaagcgg aacgagactg ggtgcagcat
     2281 gtcaacgatg tagcggacag cacactgtac ccgctggcga actcgtggta catgggggtg
     2341 aacattccgg gcaagccgaa agtgttcatg ccgtatgtcg gcgggttcgc cggatacaag
     2401 aagaagtgcg atgcggtggc ggcgaaccag tacgaagggt tcgtgatcag ttaggcgcgt
     2461 tggttgacca aatccaacgg atagatcggc cggcgtacct gctcgaactt caggatatcg
     2521 tagtccgacg tgcaaacgcc gagcccgttg cattcgacca catgtttcgc cagcgacccg
     2581 agatcggcgc gccagtgcac ccggcttttg atcgcgacat agcgcttttt tgccggatcg
     2641 atcccgacga ccttgaacag ccccagatcg cttggctcgg catgacggct gatcagcacg
     2701 atctccactt tgccggtgtc cagcaccgcc atcgggccca tcgtcactgc cacaccggcc
     2761 cgcatcgggc tttcgctgac gaaatatccg gccgataagg tccgcacccg gccgcgcacc
     2821 agcaagggtt cgttgtcgcc cggaatggtc ggcatttgca tacggccgcc aatgcgtagc
     2881 tcgaccgtgg cgccaacccc ggcgcgcatt gccgcctgta ccgcatccgg gtcgtaaatg
     2941 ccgaagaaca ccacgtcctc cagcccttgc cgcatgattt ccgccagcac cgtggtggta
     3001 tccatggtgc cgcccgaggc ggagttgtcg caat
//
LOCUS       DATAVD010001628         2202 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2386776, whole genome shotgun sequence.
ACCESSION   DATAVD010001628 DATAVD010000000
VERSION     DATAVD010001628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2202
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2386776"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..310)
                     /locus_tag="VHX39_31305"
     CDS             complement(<1..310)
                     /locus_tag="VHX39_31305"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3995682.1"
                     /translation="MVQIRQVGPRIGVEVSGVDLRTVDAAGFAPIYQAWLDHNVLVVT
                     GQDLTIHDFLAYSRRFGIVSPHPSKSTRHPDLPEITILGTGKFNPDGSLNQAIYRRGA
                     E"
     gene            400..1419
                     /locus_tag="VHX39_31310"
     CDS             400..1419
                     /locus_tag="VHX39_31310"
                     /inference="COORDINATES: protein motif:HMM:NF025587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein"
                     /protein_id="HEX3995683.1"
                     /translation="MHLFKQHAVKDPESVSQLIPVIDFGPYFAGEPGALDRLAEQLRY
                     ACENIGFFYAANHGVPQDVIDRGFAASRRFHALPLAEKLRLQLNESNIGYMPMNASMQ
                     AASTVHKATKPNQNESFFISHDRGADHPDVVAGVPLRGRNQWPEGHSDLRRDMMAYFD
                     ALRAMCGRILPGFAVALDMPPDTFAPFFANEEHINLRFLHYPPQEDTSENTFGTAPHT
                     DNSFMTALARTDVPGLAVRLPSGEWFAPPVIPATFLVNLGNMMRRWSNDRFLSTPHGV
                     INESGIDRYSIAYFHSPNPAATIECLPSCVSADNPARYPPAVYRDLVQEFYRKNYFHQ
                     KGHGS"
     gene            complement(1416..1559)
                     /locus_tag="VHX39_31315"
     CDS             complement(1416..1559)
                     /locus_tag="VHX39_31315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995684.1"
                     /translation="MLRRQYRLKHSDAIVRASAQVQAVLLVMRDTNGFPAGDPGVLLP
                     YRV"
     gene            complement(1696..2133)
                     /locus_tag="VHX39_31320"
     CDS             complement(1696..2133)
                     /locus_tag="VHX39_31320"
                     /inference="COORDINATES: protein motif:HMM:NF013487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX3995685.1"
                     /translation="MTKRIALCAVMLLTGLGVARADGLDPIAVRQAGFALQNGDFAFI
                     RSVVKDKGDVKPLEGPAKAIAMWTKVIPTLFPKGTETGGNTKALPAIWSDPAGFQKIA
                     LAANEAATKLAVDAKAGNTEEVAADAKLLGQQCGACHKGYREK"
BASE COUNT          411 a          740 c          633 g          418 t
ORIGIN      
        1 cctcggcccc ccgccggtag atcgcctggt tcagcgaccc atccggattg aatttcccgg
       61 tccccagaat ggtgatctcg ggcaggtccg gatggcgtgt gcttttcgac ggatgcggtg
      121 agacgatccc gaaccggcgg ctgtacgcca ggaagtcatg gatcgtcagg tcctggccgg
      181 tgaccaccag gacattgtga tcgagccacg cctgatagat cggcgcgaat cccgccgcat
      241 ccaccgtccg tagatcgacc ccggaaacct cgaccccgat gcgcgggccg acttgacgta
      301 tctggaccat cgactgtcct ccctcggggc gaaagggaat gccctacccg ccggcgcgtc
      361 aagatgctag cctatcggga cacctgtcag gaggcttcga tgcacctgtt caagcagcac
      421 gcggtcaagg atcccgaatc cgtttcgcag ttgattccgg tgatcgactt cggcccgtat
      481 ttcgccggag agcccggtgc gctggatcgg ttggcggaac aacttcgcta cgcgtgcgaa
      541 aatatcggtt ttttctatgc cgccaatcat ggggtgccac aggacgtcat cgaccgcggg
      601 ttcgccgcgt cccgccggtt tcacgcgttg ccgctggcgg agaagttgag gctgcaactg
      661 aacgaaagca acatcggcta catgccgatg aacgcgtcca tgcaggccgc ctcgacggtg
      721 cacaaggcaa cgaaaccgaa ccagaacgaa agcttcttca tcagccacga ccggggtgcc
      781 gatcatccgg acgtggttgc cggcgtgccg ctgcgcggcc gcaaccagtg gccggagggg
      841 cattccgacc tgcgccgcga catgatggcc tatttcgacg ccctgcgtgc gatgtgcggc
      901 cgcatcctgc ccggtttcgc cgtggccctg gacatgccgc cggatacgtt cgcgccgttc
      961 ttcgccaatg aggaacacat caacctgcgc ttcctgcact atccgccgca ggaagacacc
     1021 agtgagaaca ccttcggcac cgccccccac accgacaaca gtttcatgac ggccctggcc
     1081 aggaccgatg ttcccggcct tgccgtccgc ctgccgtcag gcgagtggtt tgccccgccg
     1141 gtcattcccg caacgtttct ggtcaacctc ggcaacatga tgcggcgctg gtcgaatgac
     1201 cggttcctgt cgacgccgca tggcgtgatc aacgagtccg ggatcgaccg gtattcgatc
     1261 gcatatttcc acagtccgaa cccggcggcg accatcgagt gcctgccaag ctgcgtttcg
     1321 gccgacaacc ccgcgcgcta tccgcccgcg gtctatcggg acctggtgca ggagttctac
     1381 cggaagaact actttcatca gaaaggacat ggcagctaga cccgatacgg tagcagaaca
     1441 cccggatcgc cggccgggaa cccgttggta tcccgcatca ccagcagcac cgcctgcacc
     1501 tgtgccgacg cccggacgat cgcgtccgaa tgcttcaacc gatattggcg ccgcaacatc
     1561 gcgccacgga ccttaacgta aaccccggct tcccgcagtt tctacctccg tactgatggt
     1621 cggtgaagta gaaacgagcc actcttgcct gcccgcctgg taacgcagcc agacgggccg
     1681 gcaatcatgc ggacattact tctcgcgata gcccttgtgg caggcgccgc actgctgacc
     1741 cagcaacttc gcatcggcag ccacttcctc ggtgttgccg gctttcgcgt cgacggccag
     1801 cttggtcgcg gcttcgttcg ccgccagcgc gattttctgg aacccggccg ggtccgacca
     1861 gattgccggc agcgccttgg tgttgcctcc ggtctcggtg cccttgggga ataaggtggg
     1921 gatcactttg gtccacatgg caatcgcctt ggccggccct tccagcggct tgacgtcgcc
     1981 tttgtccttc acgaccgaac ggatgaaggc aaaatcacca ttttgcagcg cgaacccggc
     2041 ctgccgcaca gcgatcggat ccagcccatc cgcgcgggcc acacccagcc cggtcaacag
     2101 cataacggca cataatgcta tacgctttgt cattcgataa cgccttccca gtcggttatg
     2161 gacgcgcgat tgcacaacga tcatggatcg ccacgatgat tc
//
LOCUS       DATAVD010001629         1822 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2201521, whole genome shotgun sequence.
ACCESSION   DATAVD010001629 DATAVD010000000
VERSION     DATAVD010001629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2201521"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..339
                     /locus_tag="VHX39_31325"
     CDS             <1..339
                     /locus_tag="VHX39_31325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007400035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEX3995686.1"
                     /translation="AAGEMKHGPIALIDSSVPVIAIVPSGPLFEKTASNLQEAAARGG
                     QVIVFSDAAGAAKLKGIATETVVLPAVDPFVAPILYAIPVQVLAYHVAVLKGTDVDQP
                     RNLAKSVTVE"
     gene            503..700
                     /locus_tag="VHX39_31330"
     CDS             503..700
                     /locus_tag="VHX39_31330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995687.1"
                     /translation="MPQDQIEKLATANQRLLETAGRLVALSQEMGHGDMRSRLSKEIH
                     AILEASDVIANAVQAAIYVNA"
     gene            1176..1778
                     /locus_tag="VHX39_31335"
     CDS             1176..1778
                     /locus_tag="VHX39_31335"
                     /inference="COORDINATES: protein motif:HMM:NF013412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEX3995688.1"
                     /translation="MGARPFYHDGMRSLQDRFDGRRVADALAAHRVRHDFWDDDRRMI
                     EHASFFFIATSFGEFVDCSMRSGAPGFVQIVGPGTLEFPEYDGNSMYRTLGNISRNPN
                     VGLLFVKFDGKSYRVRINGQAVILDDADSLARHHAAKLVIRVQCELFSNCPRAVHDLP
                     NDRLSLYVPHPGHEPPAPEWKSRDYLRDILPENDPHRDPG"
BASE COUNT          352 a          520 c          579 g          371 t
ORIGIN      
        1 gctgcgggcg aaatgaaaca cgggccgatt gcgttgatcg atagctcggt gccggtgatt
       61 gcgatcgtgc cctcggggcc attgttcgag aagacggcat ccaacctgca ggaggccgca
      121 gcgcgcggcg gccaggtgat cgtgttcagc gatgcggcag gggcagcgaa gttgaagggc
      181 atcgccaccg aaacggtggt gctgcccgcg gtggatccgt tcgtggcgcc aattttgtac
      241 gcaatcccgg tgcaggtgct ggcctatcac gtcgctgtgc tgaagggcac cgatgtggat
      301 cagccgcgga acctggcgaa gtcggtgacg gtggagtaag caacgaccgc gttccggctc
      361 gctgaaagcc cgatgcgtgc accagtgcta catgggtagg aggcagggtc gcatcggctc
      421 aacttcgaaa acgccgcgtc tgtgtcgccc agacggtctc ggccatcgcc tgcagtgcga
      481 catcacattc atgcttcggc gaatgccgca ggatcaaatc gaaaaattgg caaccgccaa
      541 tcaacgcttg ctggagacgg cgggaagatt ggtcgccctg tctcaggaaa tggggcacgg
      601 ggacatgcga tcacgtttgt ccaaggaaat tcacgcaatc ctggaggcca gcgatgtcat
      661 cgccaacgct gtacaagccg ccatatacgt caacgcctga aaccccggtg accgagcgat
      721 gtccggcgtt gcgccgtctg atgctcgtcc tcctccggac gacacgctcg cccagaagca
      781 ggtggaggag cgtaagtccg ctgctgacct ggccgccgcg gtcgtccgcc ggattggaca
      841 tgatgacgag gcccgaagat ggatcgccac gacgatcatc cggattttcg ccgcatcggt
      901 ggcgattgtt ctcgggatgc tggtagcaca aggcatttgg ggtcgcgctg ggatacggtt
      961 gcgagccagt cagcggacct gattaagtct actgtcctgc ccatcgtgac gctggtactg
     1021 ggctactatt ttggaaaggg cggtcggacc tgatattatc tctgcgtccg ctccgtgtac
     1081 cgcgtcgggg cattctggca gtgacatttt cggtcacccg ctcgcggtgg aaacgacata
     1141 cgcaaaaggt caacgccggg aaaggtagtt ggataatggg ggcacgtccg ttctatcatg
     1201 acggcatgcg gtcgttgcag gaccgcttcg atggccggag ggtggcggat gcgctcgccg
     1261 cgcatagggt ccggcatgac ttctgggacg acgaccggcg catgatcgaa catgcgtcgt
     1321 tctttttcat cgccacctca tttggcgaat tcgtcgattg cagcatgcgc tccggtgccc
     1381 cgggttttgt tcagatcgtc ggcccaggaa cgctggagtt tccggaatac gatggcaatt
     1441 cgatgtaccg gaccttgggg aatatcagcc gcaaccccaa cgttggactg ttgttcgtaa
     1501 aattcgacgg taagagttat cgggttcgca tcaacgggca ggccgtgatc ctggatgacg
     1561 cggactctct ggcgcgccac catgcggcaa aattggtgat tcgcgtgcaa tgcgaattgt
     1621 tttccaactg tccacgcgcg gtgcacgatc tccccaacga ccgcctgtcg ctttacgtcc
     1681 cccatcctgg gcatgagccg ccggcgccgg agtggaaaag ccgcgactat ttgcgggata
     1741 ttctgccgga gaacgacccg catcgcgatc cgggctgacg catcatcggc tcccgtctcc
     1801 gcagttggtt taacaccacc gg
//
LOCUS       DATAVD010001630         5241 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_340308, whole genome shotgun sequence.
ACCESSION   DATAVD010001630 DATAVD010000000
VERSION     DATAVD010001630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5241
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_340308"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..808)
                     /locus_tag="VHX39_31340"
     CDS             complement(<1..808)
                     /locus_tag="VHX39_31340"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIR domain-containing protein"
                     /protein_id="HEX3995689.1"
                     /translation="MAYTTGFEYDVFISYAAVDDREPVGENGQGWVTTFVRNLEMVLA
                     SRLAGREKLRIYFDRRNLGGNHELTELPEAVGKSALFLAITSPAYSDREWTKRELDTF
                     LKGAPDSLRLFAAEYLPLDAGETHPHPLNDRKRLKFWDVDEMSSFAAIPLTTKDQPFR
                     NRIHDLADQIKKQLVAINTAEIARPAIIQAAAVIADDGARRSKGIVFMAQTTDDLEEE
                     RDQLRRYLEQFGYLVLPAGDLPGGGDAFRAEIERDIQQADLYVHLLGPRAG"
     gene            complement(1106..2179)
                     /locus_tag="VHX39_31345"
     CDS             complement(1106..2179)
                     /locus_tag="VHX39_31345"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3995690.1"
                     /translation="MTTPPIRFGIWALVHGNRGALQDPEEPYDASWERNRRLVLEAEA
                     LGFDTTLVAQHTINPHFAPMDQLEAWTASAALAALTDRIEIIAAIKPSLYHPVVLAKM
                     ALGIEHISRGRFAINLVNAWNRPELEKAGIGFAEHDERYVYGREWLSVVEPLLRGQTL
                     NHHGAHFNVTDYTLHPSDPYRERPRIYIGGESEPARALAAKMGDVWFINGQPIDDVAG
                     LINDLRARPREGAPLRFGLSAFVIARPTEQEAQAHLMHLFALASKDMQIRMTQHANTD
                     PKSVMAATMRRTPRVGSNGGTAAGLVGSYDQVAERIVAFNRVGIETFMLQYQPFEADM
                     RRFAAEVMPRARALTGAVEPVAQ"
     gene            2532..3758
                     /locus_tag="VHX39_31350"
     CDS             2532..3758
                     /locus_tag="VHX39_31350"
                     /inference="COORDINATES: protein motif:HMM:NF015527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase family 2 domain-containing
                     protein"
                     /protein_id="HEX3995691.1"
                     /translation="MEAFRTGSRAPLFFMHIPKTAGMSMRQYLSNQYAADEICPAERW
                     QDLLDLGRDVGSYRLVRGHFRYNLRQLIAPDARMLVVLREPLRRTVSALRHLGRDPGF
                     HQTYDIAKHLTLGEMIRHPDIMGLQRDVQARFLCASRQPDEVTLYLEGARSRNMDADA
                     GDQERPPAFQLAADRLETIEFVGITEQLGELVASMAQEMNFHPSAHFPVINENPDRVD
                     PLHGLTGQELDIVREHNTMDLQLYDFARKMVNGRGFDRSMRQMVRSGVYQVPPGSFAI
                     EMSGIIPGSGWYPAESAGQTSWRWTGPGRHFTLEVPLREDVSYRFDMTFSDLRPSGPG
                     DLSVEINDYPIAFELWSEGALCRCVFVIEQGLLAKNGGFCRIQIDAGEPIQLSTSDIR
                     LLGISVRRVEFVCLDQ"
     gene            3973..>5241
                     /locus_tag="VHX39_31355"
     CDS             3973..>5241
                     /locus_tag="VHX39_31355"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3995692.1"
                     /translation="MWPLNAPARAILRLPGATSIPWAVFDADWYRETYAGDTTHLAGA
                     SAETVLEFYFDAGQRLVHSPNMLFDEAWHRQTYPGIAALVEAGEFPSAFDAWCRGGCC
                     ERSPHWLFDELEYRRRNPDLTDAFLASNGLVNGYDHYLWRGNGEGRIGHPLFDPAVYC
                     SALDPVDAEAADADGPFWHCLRRLHRRGAEVRTSACFDPQWYMKHYPAVADSVAHGSW
                     RWALEHYLWNPTPTQFDPLPAFSEVYYLGRYDDAGGMVRRGEIRNGFAHFLTHGVGEL
                     RTPSEPLDLAWYAAQERVKRDLEERLVPNPFVHWLTIGQPGGFPSAPPLVATITEVAA
                     RTLFRQRARTLSVLHARTKLHFETIGAPALSVIMVLHNQFDLTMLALGSLRANYAGDI
                     DLVLIDSGSTDETRNIERYVEGVTYFRFDTN"
BASE COUNT          968 a         1577 c         1608 g         1088 t
ORIGIN      
        1 ggcccgctcg cgggccgagc aggtgcacgt agagatcggc ctgttgaata tcgcgttcga
       61 tctcggcgcg aaacgcatct cccccgccag gcaaatcgcc ggccggaagc accagataac
      121 caaactgttc caaataacgc cgcagttgat cgcgctcttc ttccagatcg tcggttgttt
      181 gcgccatgaa aacgataccc ttcgaccgcc gggcgccgtc atcggcgatg acggctgccg
      241 cctgaatgat cgccggacgg gcgatttcgg cggtgttgat ggccacaagt tgcttcttta
      301 tctgatcggc gaggtcatga attcggttgc ggaacggctg atctttcgtt gtcagcggga
      361 tggcggcgaa tgacgacatc tcatcgacgt cccagaattt cagccgcttg cggtcgttca
      421 acggatgcgg atgggtttcg ccagcgtcca gcggaagata ctcggccgcg aacagtctca
      481 ggctatcggg tgcgcctttc agaaaggtgt ccagctcgcg ttttgtccac tcccggtcgg
      541 agtaggcagg cgacgtgatc gccaggaaaa gcgcggactt gccgactgcc tcgggcaatt
      601 ccgtaagttc atggttgccg ccaaggttgc ggcgatcaaa atagatgcgc aacttctctc
      661 gaccggcgag acggctcgcc agcaccatct ccaaattccg cacaaacgtt gttacccagc
      721 cctggccgtt ttccccaacc ggttccctgt cgtccacagc cgcgtaactg atgaaaacgt
      781 cgtattcaaa tcctgtagtg taagccattc cgtccccccg atccgcaatc gagctgatcc
      841 tgcaatttgc agccaggacc gtaatcttcc cgttccggtc tctactggac gttggcatgt
      901 cttagaagac ttttgcaagc gccagcccag gcgtcatggt aacggtatgt gtactcccgg
      961 tccttcggca atccgggccc gttgcaacct gagcgcgatc cgacatcaag gcctgcaatg
     1021 ttgtgggtcg gaccaccgta tagcgtcgtc tcgattgtgc tggtgcgcgg acgatgcgaa
     1081 ctcctgcgtc agggcatcgc cgacatcatt gcgccaccgg ctcgaccgct ccggtcaacg
     1141 cccgcgcacg cggcatcacc tcggctgcga accggcgcat atccgcctcg aacggctggt
     1201 attgcagcat gaacgtctcg atccccaccc tgttgaaggc aacgatccgc tcggccacct
     1261 gatcgtaact gccgacaagg cccgccgctg tgccgccatt gctgccgacc cgcggagtac
     1321 gtcgcatcgt cgccgccatc accgattttg ggtccgtgtt ggcatgctgc gtcatccgga
     1381 tctgcatgtc cttcgacgcc agtgcgaaca ggtgcatgag gtgcgcctgt gcctcttgct
     1441 cggtcgggcg ggcaatcacg aatgccgaca atccgaaccg cagcggcgcc ccctcgcgcg
     1501 gacgggcgcg gaggtcattg atcaaaccgg ccacatcgtc gatcggctgg ccattgatga
     1561 accatacatc gcccatcttc gccgccagcg cccgcgccgg ctcggactcg ccgccgatat
     1621 agatacgagg gcgctcgcga tacgggtcgg aggggtgcaa agtatagtcg gtgacgttga
     1681 agtgggcgcc atgatggttg agcgtctggc cgcgcaaaag gggctcgacg accgacagcc
     1741 attcccggcc gtaaacgtac cgttcgtcat gttcggcaaa gccgatgccg gctttttcca
     1801 gctccgggcg gttccacgcg ttaacaagat tgatggcgaa ccggccgcgg ctgatgtgct
     1861 caatgcccag ggccatcttg gccaggacaa ccgggtgata aagcgagggc ttgatcgcag
     1921 cgatgatctc gatccggtcc gtcagcgccg cgagcgccgc cgacgcagtc catgcttcca
     1981 actgatccat gggcgcgaag tgcgggttta tggtgtgttg cgcgaccagc gtcgtatcga
     2041 agccaagcgc ctccgcctcc aggaccaacc ggcggttgcg ctcccatgac gcgtcatacg
     2101 gttcctcagg gtcctgcagc gcgccgcggt tgccgtggac gagggcccat atgccgaaac
     2161 ggatcggagg agtggtcatg gcggttgtca tcgtccaggt tgtgttaccg gatgatgccg
     2221 tgaaccggcc ggaggtgcca tgggtgggac cagccagctg tcctgggcgc aggtgaacag
     2281 ccgggcgaac tgccccctga tagatcggtc cggatcgagg cttaaccagg ttgtatcaaa
     2341 tggtcgggta aaatcttttc tcccgcgaac gacagatttg ctacaacagt tcatgtggtg
     2401 cgttccgccg gggggcgggc cgacctgaac tgaccgaaca aattgtctcg gagcggcacg
     2461 cgcaaaaatt gcgcgcgccg gcgcaaatgg aataggcagg cgaggagatg gacagtcgga
     2521 ccgaaccgct gatggaagcg tttaggacgg gcagcagagc tccgctgttt ttcatgcaca
     2581 ttccgaagac cgcaggcatg agcatgcggc aatacttaag taaccaatac gcggctgacg
     2641 aaatctgtcc ggcggagcgc tggcaggatc tgcttgatct cgggcgcgat gtcggatcgt
     2701 accgtctcgt gcgcgggcat ttccggtata atttgcggca actgatcgcg ccggatgcgc
     2761 ggatgctggt cgtgttacgt gagccgctcc ggcgaaccgt ttccgcactg cgtcatctcg
     2821 ggcgtgaccc cgggttccat cagacctatg acatcgcaaa gcacctcact ctgggtgaga
     2881 tgatccgtca ccccgacatc atgggcttac agcgcgatgt gcaggcccgc ttcctttgcg
     2941 cgtcccgcca gccggacgag gtcaccttgt atcttgaggg tgcgcgctcg cgtaacatgg
     3001 atgctgacgc aggcgaccag gaacgcccgc cggcgttcca actcgccgcc gaccggctgg
     3061 aaaccatcga gttcgttggt atcaccgagc aacttggtga actggttgcg tccatggccc
     3121 aggagatgaa ctttcatccg tcagcgcact tcccggtcat caatgagaat cccgaccggg
     3181 tcgatccgtt gcatgggctg accgggcagg aactcgacat cgttcgcgaa cataacacca
     3241 tggatttgca gctgtatgat ttcgctcgga aaatggtgaa tgggcgaggc ttcgatcggt
     3301 ccatgcggca gatggttcgc agcggggttt atcaggtgcc ccccggctct ttcgcgattg
     3361 aaatgtccgg tatcatacca ggttccggct ggtaccccgc cgaaagtgcc ggtcagactt
     3421 cctggcgttg gactggtcct gggcggcatt ttaccctgga agtaccgctt cgggaggatg
     3481 tgtcgtaccg ctttgatatg acgttcagcg acctgcggcc ttccggcccg ggagatcttt
     3541 cggttgaaat caatgactac cccattgcgt ttgagctgtg gtccgaaggt gcgctgtgcc
     3601 ggtgtgtgtt cgtcatcgaa cagggattgc tcgccaaaaa cggaggtttc tgcaggattc
     3661 agatagacgc tggggagcca attcaattga gcacgtcgga cattcgtctg ctcggcatct
     3721 cggtccggcg ggtggagttc gtctgcctgg accaatgagc gcggcttggg caatccagga
     3781 tcatactttg atagacggca gcgggagcga tggtccgatc cccgaggttc atgataatgc
     3841 cgcctgcgtg gcggtgtcgc caacggacgt ggtggcgtca acggcgaccg ggttgcaacc
     3901 gcgcccacaa tacacggcaa cgatctgatg gcactgccga cctaactcag ccgccggacc
     3961 aaggtgacct tcatgtggcc gctcaacgct cctgcccgcg ccattctccg tctgcccggt
     4021 gcgacctcca ttccctgggc ggtctttgac gccgactggt atcgagaaac ctacgcgggc
     4081 gacacgactc acctggccgg tgcatccgcc gagaccgtgc tggaatttta cttcgacgcc
     4141 ggccagcgac tggttcattc gccgaacatg ctgttcgatg aggcctggca ccggcaaacg
     4201 tatcccggga tcgccgctct ggtcgaggcg ggagagtttc cgtccgcctt cgacgcatgg
     4261 tgccgaggcg gctgttgtga gcgctcgccg cactggctgt tcgacgaact ggaataccgt
     4321 aggcgcaatc ccgacctcac cgacgcattc ctggcaagca atggcctcgt taatgggtat
     4381 gaccattatc tttggcgcgg taacggcgag ggccgcatcg gccatccgct atttgacccg
     4441 gccgtctatt gctcagctct tgatccggtg gacgccgaag cagcggatgc ggacggccca
     4501 ttttggcatt gcctgcggcg gttgcaccgg cgtggggcgg aagtgcgcac atccgcctgt
     4561 ttcgacccgc agtggtatat gaagcactat ccggcggtcg ctgactcggt ggcccatggc
     4621 agctggcgat gggcgctcga acattatctg tggaacccca cgcccacgca gttcgatccg
     4681 cttccggcgt tctccgaggt ctattatctc gggcgttacg atgacgcggg cggtatggtg
     4741 cggcggggcg aaatccgcaa cggtttcgcg catttcctga cccacggtgt gggcgagtta
     4801 cgcacgccga gtgagccgct ggatctcgcc tggtacgcgg cgcaggagag agtgaaacgg
     4861 gacctcgagg aaaggctggt cccgaatccg ttcgtgcatt ggctgacgat tggccagcct
     4921 ggcggtttcc cgtcggctcc accgttggtt gcgacgatca ctgaggttgc cgcccggact
     4981 ctgttccgcc agcgggcgcg aaccctctcg gtgttgcatg cgcggactaa attgcatttc
     5041 gagaccatcg gtgcgccggc gctcagcgtc atcatggtgc tgcataacca gttcgatttg
     5101 accatgttgg cgctcggatc cctgcgtgcg aactatgctg gcgatatcga cctggtgttg
     5161 attgattccg gatcgaccga cgagacccgc aacattgaac gctacgtcga aggggtaaca
     5221 tatttccgct tcgatacaaa t
//
LOCUS       DATAVD010001631         2430 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3315468, whole genome shotgun sequence.
ACCESSION   DATAVD010001631 DATAVD010000000
VERSION     DATAVD010001631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3315468"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1096
                     /locus_tag="VHX39_31360"
     CDS             <1..1096
                     /locus_tag="VHX39_31360"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003622322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEX3995693.1"
                     /translation="GEPGFEYRETIASACAAASAGGVTTLAALPDSNPAIDDPALVHL
                     LITRGRETGAVTILPYGAATCGCRGEALAELGLLREAGAVAFTDGARAIASSGLMRLV
                     LSYARGFGARIVQHPEDPSLARGGSATEGELAARLGLPAIPAAAEAIVVARDISLARL
                     TGGAVHFAHVSTKDALDLIRCAKADGLSVTCDTAPPYFDLNENAIGDYRTYAKLSPPL
                     RREDDRLAVLCALGDGTIDAIASDHQPRDADDKRLPFAQASAGGVGLATLLAVTLAHV
                     HNGELTLNAAIALLTSRPAALMGIDAGRLRKGAAADVCLFHPDRIWQVRAGSLPGKAQ
                     NTPFDGRALEGTVLGTWKAGRRVYTDAASV"
     gene            complement(1267..2139)
                     /locus_tag="VHX39_31365"
     CDS             complement(1267..2139)
                     /locus_tag="VHX39_31365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010515666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3995694.1"
                     /translation="MPDFTLTDIETNGARIRLRHGGSGPPLLLLHGNPLTHVAWHKVA
                     PRLAQRFHVVAADLRGYGDSSAPPEAPDHSNYSFRAMAQDQVEVMRALGHDRFYVAGH
                     DRGGRTVHRMCLDHSDKVMKAAIIDIVPTLDMWAAMDKEGALGGWHWPFMAQPADFPE
                     RMMGGVPADWFMRKKLLKLTADLGHIPPEIWDEYVRCFNEKTIRGSCADYRAAATIDC
                     DLDTADLDRKLQMPILVLWGKTSSVGKRFADPLGLWRQRAEDVRGEALPSGHYVNEEA
                     PEQVLDWFLRFFDN"
BASE COUNT          447 a          751 c          765 g          467 t
ORIGIN      
        1 gggcgagccc ggatttgaat atcgcgaaac gatcgcgtca gcctgcgccg ccgcctcggc
       61 gggtggggtt acgacgctcg ccgcactgcc tgacagtaat ccggcgatcg acgatcccgc
      121 acttgtgcat ttgctgatca cgcgcggccg agaaaccggt gccgtcacga ttttgccata
      181 tggcgccgcc acctgcggct gccgcggtga agcacttgcc gaacttggcc tgctgcgcga
      241 ggccggagcc gtcgcgttta ccgatggggc tcgagccatc gcgtcctccg gtctgatgcg
      301 gctggtattg tcttatgccc gcggctttgg cgcccgcatc gtgcagcatc ccgaggaccc
      361 gtcactggct cgcggcggca gtgcgacgga gggtgaactg gcggcgcggt tgggcttgcc
      421 cgccatcccg gcggcggcgg aggcgatcgt ggtggcccgc gatatcagcc tcgcacggct
      481 caccggcggg gcagtgcatt ttgcccatgt ctcgaccaag gatgcactgg acctgatacg
      541 gtgtgcgaaa gccgatggac tgagcgtaac ctgcgatacc gcacccccgt acttcgatct
      601 gaatgaaaac gcgatcggcg attaccgcac ctacgcgaag ctttcgcccc cgctgcggcg
      661 ggaagacgac cggctggcgg tgctctgcgc gcttggggat ggcacgatcg atgccattgc
      721 atccgaccat caaccgcgcg acgccgacga caagcgattg ccgtttgcgc aagcgagcgc
      781 cggtggcgtc ggattggcga cgttgctggc agtgacattg gcgcatgtgc acaacgggga
      841 actgacgttg aacgcggcaa ttgcgctgct gaccagccgg ccggctgcat tgatgggaat
      901 tgacgcaggg agattgcgca agggcgcagc ggcggatgtt tgcctgtttc atccggaccg
      961 gatctggcag gtgagggcgg ggtcgttgcc agggaaggca cagaacacgc cgtttgatgg
     1021 gcgcgccttg gagggcacgg tactaggcac gtggaaggcc ggccggcgcg tttataccga
     1081 cgccgcctca gtttgactgt ttgttgtggg cccgcgccga cgatcgaaaa cctgaagctc
     1141 cagtagtgaa cggggccgca aggcagcggg ctcggatcag ccggccgcac gacgcgtcga
     1201 agtcgccggt atcgagatac ctgtaatatc cgctgaaacg atggggtcaa tgcggtcttc
     1261 gagaactcag ttgtcgaaga accgcaggaa ccaatcgagt acctgctccg gtgcttcctc
     1321 gttgacataa tggccgcttg gcagagcctc gccacggacg tcctccgcgc gttgtcgcca
     1381 cagaccaagt ggatcggcga accgctttcc gacgctgctg gtcttccccc acagcaccag
     1441 gattggcatc tgcagtttac ggtcgaggtc cgcggtatcg aggtcgcaat cgatggtcgc
     1501 cgctgcgcgg tagtcggcgc acgagccgcg gatcgtcttt tcattgaaac agcggacata
     1561 ctcgtcccag atttccggcg ggatgtggcc gagatcggca gtcagtttca gcaatttctt
     1621 ccgcatgaac cagtcggccg ggacaccacc catcattcgc tcggggaaat cagcaggctg
     1681 tgccatgaac ggccagtgcc atccgcccag agccccttcc ttgtccatcg ccgcccacat
     1741 atcgagcgtc ggcacaatgt cgatgatcgc ggctttcatc actttgtccg agtggtcgag
     1801 gcacatgcga tggacagtgc ggccgccgcg atcgtgcccc gcgacgtaaa atcggtcatg
     1861 gcccagagcc cgcatcacct cgacctggtc ctgagccatc gcgcggaagg agtagttcga
     1921 atgatccggc gcctcgggcg gcgccgaact gtccccatag ccgcgcagat cggcggccac
     1981 gacgtgaaac cgttgggcca gtcttggcgc caccttatgc cacgcgacat gggtcagcgg
     2041 attgccatgc aacagcagca gtggcggccc gctgccgcca tgtcgcaaac ggatccgggc
     2101 accgttggtc tcgatgtccg taagggtgaa atcgggcatg atttccatgg cgatcctgtt
     2161 ttgctgacat attcaatggg ctagaaccgt actatgtcat ctgcccgact gctgcgccac
     2221 agcgcctggg cgcggcctcg gcccgaccac aactcctgca ctacccacga aacggtaaga
     2281 attaaatcac agattttacc ggaaaaggtt cccgtgcaaa atcctctata ttcaatccgt
     2341 gtgaacagtc gcagctattc cgtgcgaggc aacgtcgtga tttgttgctt cggtctctcg
     2401 cacgcccgat ccaatccgtc gcatcggttg
//
LOCUS       DATAVD010001632        13615 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2577836, whole genome shotgun sequence.
ACCESSION   DATAVD010001632 DATAVD010000000
VERSION     DATAVD010001632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 13615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13615
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2577836"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..509)
                     /locus_tag="VHX39_31370"
     CDS             complement(<1..509)
                     /locus_tag="VHX39_31370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX3995695.1"
                     /translation="MGGIRAGDAAIGLLVAALGLIGLIQAAGATDNEIYVFGLSLLGF
                     AVVFDFGLLKRHYDTVGQWPEDGYNEAIVKKFLIASMFWGVVAFLVGVVLAAQLSWPA
                     LNLGISFTNFGRLRPVHTSAAIFAFGGCALFSTAFYVVQRTCRARLFGGETMANFIFW
                     GYQFFIVQAA"
     gene            688..1299
                     /locus_tag="VHX39_31375"
     CDS             688..1299
                     /locus_tag="VHX39_31375"
                     /inference="COORDINATES: protein motif:HMM:NF024778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX3995696.1"
                     /translation="MVLAGAAASPLHCAPMCGGFVLGQVSDRMARLPSAHLSECQRMR
                     AASLAPYHLGRLTTYSALGFAAGSGGFAMQWLGGNAGVFLLIGAALLVLQAVRRLRPG
                     FGLPLTRTLRGYPLGVALGFLPCGILYAALAAAGATASPMYGALAMFCFGLGTVPTLV
                     TIGLFGAAAGHRFRRGLTAMTPAVLLFNAGLLTLLGVRLLAGS"
     gene            complement(1300..2115)
                     /locus_tag="VHX39_31380"
     CDS             complement(1300..2115)
                     /locus_tag="VHX39_31380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010501159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0140737 - encapsulin nanocompartment
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 encapsulin nanocompartment shell
                     protein"
                     /protein_id="HEX3995697.1"
                     /translation="MNNLHRELAPISDAAWAQIEEEAARTLKRYLAARRVVDVSEPAG
                     TALAAIGTGHQRDIAAPGHGIVARQREVKPLIELRVPFELSRAAIDDVERGSNDSDWQ
                     PLKDAAERIAVAEDRAIFDGYAAGAIQGIRQATSNPIIPLPAVVADYTVAIARALSQL
                     RLAGVNGPYSVLLGADAYAALGAADDHGYPVLQHIKLLVNEDIIWAPAITGAVVLTTR
                     GGDFCLHIGQDISIGYLGHSDTAVRLYLQETFTFLMLTAEAAVALTPAGDAAR"
     gene            complement(2112..3194)
                     /locus_tag="VHX39_31385"
     CDS             complement(2112..3194)
                     /locus_tag="VHX39_31385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010501160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HEX3995698.1"
                     /translation="MIASSPVDAEHPVPQPVAASLTPAAMFLVVTVNEGANSVAAVQS
                     LCADLSGLLRAVGFRDLGGKLSCILGIGSDLWDRLFAEPRPAELHPFREIQSGPRHAV
                     ATPGDLLFHIRATRMDLCFELATHIMDRLGGAVSPVYEVQGFQYFDDRDLLGFVDGTE
                     NPTDQAAIDATVIGAEDPMFAGGSYVIVQKYLHDLAAWNALPTEAQERIIGRTKLSDI
                     ELDDAVKPTSAHNALTIIEEGGKEIKIVRANMPFGQVGVGEFGTFFIGYARSPRTIEQ
                     MLTNMFVGRPPGNYDRLLDFSRAITGNLFFVPSATFLDNVVDGPPPAEGPADPENTAQ
                     DETRQPAPPKLEGSLGIGSLKGNPQA"
     gene            complement(3449..4279)
                     /locus_tag="VHX39_31390"
     CDS             complement(3449..4279)
                     /locus_tag="VHX39_31390"
                     /inference="COORDINATES: protein motif:HMM:NF015376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HEX3995699.1"
                     /translation="MNRFRLLLFGLAFLAATTAKAQFGPSGPPAPGPLHIIGGGPNGG
                     CIAGAMAMPPRGDGYQTIHSSFSHFYGAPVTIQGVIALGRKARENGMPPLLVEDISLP
                     RGGPMPGGHASHQVGLDVDIALDMRMRGFLSEADRESIQIASLVRPDGRDILPSMWGE
                     STTRLLWLAATLPGVDRVLVNAAIKQQLCRTVIGDRSWLRFVRPWYDHSAHMHIEFKC
                     PEGQADCVVRAPPPPGDGCDASLQWWFDRLNAPTPPPGPPKPRPRLPEACYALFGWEK
                     "
     gene            complement(4276..4821)
                     /locus_tag="VHX39_31395"
     CDS             complement(4276..4821)
                     /locus_tag="VHX39_31395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010515946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HEX3995700.1"
                     /translation="MLPLLAVSLLLACCAPGHGLRPLPGLSGGEYHLAPGDLVRIITY
                     GEDPLTGEFRVSDQGMVSLPLAGSVKAAGQTPDQLEEAVAAMLKRRGMLTRPSVSVEV
                     STYRPIYVLGEVNKPGQYPYQPGMTVVSAAAVAGGFTYRAVQDYASVVRTADGDSVEG
                     KLLRDGLIQPGDVVTVFERKF"
     gene            5089..7254
                     /locus_tag="VHX39_31400"
     CDS             5089..7254
                     /locus_tag="VHX39_31400"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995701.1"
                     /translation="MSEVMHMRATIGIFRRHLWAFLTVAALVPACAWIAIERTTPRYT
                     ASGSLIYEPSDYNVRELESILRADPTTEAVMASQAEVLQSLKIAQRVAQQGNLFGSPE
                     FNPALRPRSAIRMAAEWVRSVLGRSSERDLPNVIYGPVPDPSRDATILAVRDALHAEP
                     LHSSRVLEVTFNAEDPLVAAAGVNSAMDIYIKDQFTAKAAAVRRATAWLDQRADALRG
                     EVRKEENRIAAYRAEHNFAQGMTAGLDAEKISHLNENLSHARADLAGADARLDAARGR
                     VGVEAQAAIATSVVPLRTSLEQLTAQQQAQTARLGPNHPDLESSNRQVEQARRAVDAE
                     ISRVVAATAQERRTAADRVALLEDNLHAAQKEADNEAKAQIPLNAMERDAAAARAQLQ
                     AVLERIQQTAQQHALETSEAHEISLALPPRRPSWPRPLPMMAAAMAAGVLLGLMLVYL
                     LHLTDSTLHSGEDVRALAKLPCFALVPELTRRDLRTTPIEEFVLRRPLTAYAEQIRAV
                     RAGLWSGVERPRVVAVAAARPSEGKSVLALSLARSAALSGEKVLLIDCDMRRPTLGHR
                     LRVANGPGLADLLRGDNGMLDVLHNDQLGAPGGGMHFVPAGQPRGDTFGLFMGAEMAQ
                     LLLEARQHYTLIILDSAPVQAITEARVVAAIADATIFCIRWCATPRDIASHALELLED
                     AHAQVAGVVLTRVDPRAHLRSGYADAEVYHRRYKSYFPG"
     gene            7263..8267
                     /gene="galE"
                     /locus_tag="VHX39_31405"
     CDS             7263..8267
                     /gene="galE"
                     /locus_tag="VHX39_31405"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEX3995702.1"
                     /translation="MAQISGTRRFLVTGGAGFVGSHMVAALRDRGDAVAVLDNLNTGH
                     RAAVPPDVPLIQADLCDVARLDEILSDGPWTAVFHFAGWTQVGESMRMPMRYLQENAG
                     NGVRLIDACVRNGVDRLVFSSTAALFNAADDAPIPEDAPIDPQSPYGDAKWMVERALY
                     WAAKAHGLRSARLRYFNAAGADPAGRLGEDHRPESHLIPLVIDAVLGRRPPLDVYGGD
                     YPTTDGTCVRDYVHVTDLAEAHLLALARLDADAEVTWNLGCGTGHSVLQVIESVERVS
                     GRRVPYQIAARRPGDPAVLVAASDRARAGGWRPRHEALDDIVRTAFVWREAHPDGYGT
                     "
     gene            8257..9696
                     /locus_tag="VHX39_31410"
     CDS             8257..9696
                     /locus_tag="VHX39_31410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995703.1"
                     /translation="MERSQSRLSPSPGLIGEFAKPRGSTKLRTENILAPWLVPVLSVV
                     CLVWPALWNGYPIVFADTGTYLSQAMHHYLGWDRPVFYSLFIWPFHLGLTTWPVILVQ
                     SCITVTVLDLTRRAFGLTIGWLLGLTGFLAVATWLPWTVSELMPDLFTPLMILLLGLL
                     VFLGPEPGLWHRAAITALAAFMIATQQSSVPLAIGLLMVVIPLRRFVASSWAGKSTRY
                     NSWFVILAPLLAPAVAVVALVMVNTIGFGRISVSPYGNVFVLARVIYDGPGMMVLRRD
                     CPNSGWRLCRYIDQFPSTADEFLWDQSSPIMLAGGHKVISAEADAVIRDAVISQPDRL
                     LIATWDNTLEQLVRFASGDGLESWNQQVGLWIDRDFPAGERTTFHTARQQSGTLGIPW
                     GLTIVHRITAIAGIGTALLLVPIAWRRRHVSAWFLAIALMALPLSAAITGGLSTPHDR
                     YQSRIVWLPAAVVFLTVPALLRCKRCDFA"
     gene            9863..11335
                     /locus_tag="VHX39_31415"
     CDS             9863..11335
                     /locus_tag="VHX39_31415"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEX3995704.1"
                     /translation="MSHNVFWSALEAAGAAMFSIVAAFIIARLIGPTELGTGATAVAV
                     HVLLWVAVNALFADAIVQRDTINETTISSAAWASIAFGCGAAALQAGSGWLLAWMLDD
                     VRLVPMALLLAVPFPFVGMGGALQGLLTRQRRYRALAMRTLLGQGSGMVIGIVLASAH
                     AGAWALVVQQATGSLLAALVLMSAARWRPRAVCHWSEVVSLLRIGLPLTASTLLQIGR
                     YRIFAILIGGTAGATALGQIHVAFRLVDTVREIAFTALWRLLLPILSERQHDDVALLR
                     QVDQLLRFSSIGMMPLCSGLAVGLVPLTTLLLGPTWHAAGVAAEPLVALTVLLALMFP
                     SGVALVAVGQARYSLYANLAGLLATSAFVLLLRPTTPWMAVLVWCGAQAFISPYSLWV
                     NARALGVGLLRPLRAGIPMLVVSAIAASVAMMVDAGGLLDILVRRAAIFVLVFATCGG
                     LLIWSMRAAYFGSGQGAGHRLETDAVRSGSKSSSIIRAKI"
     gene            complement(11417..11947)
                     /gene="nusG"
                     /locus_tag="VHX39_31420"
     CDS             complement(11417..11947)
                     /gene="nusG"
                     /locus_tag="VHX39_31420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006557411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEX3995705.1"
                     /translation="MAKRWYVVHVYSGFEKKIAQQIKEQAAQSGLADQFEEVLVPTEQ
                     VMEVRRGQKVNTEHKFFPGYVLVKMDLTDDAWHLVKNTPKVTGFLGSKTRPSPISEAE
                     AIRILKQNQEGVERARPAVLFEIGEQVRVADGPFTSFNGTVEEVDEDKGRLKVSVSIF
                     GRSTPVELEYGQVEKV"
     gene            complement(11962..12156)
                     /gene="secE"
                     /locus_tag="VHX39_31425"
     CDS             complement(11962..12156)
                     /gene="secE"
                     /locus_tag="VHX39_31425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003629800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEX3995706.1"
                     /translation="MAFEPAKFAREVRTEITKVTWPSRRETLVTTALVFAMAAMTAIF
                     FFVVDQVIGLSVRAIFGAHL"
     gene            complement(12265..12341)
                     /locus_tag="VHX39_31430"
     tRNA            complement(12265..12341)
                     /locus_tag="VHX39_31430"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(12305..12307),aa:Trp,seq:cca)
     gene            complement(12484..13320)
                     /locus_tag="VHX39_31435"
     CDS             complement(12484..13320)
                     /locus_tag="VHX39_31435"
                     /inference="COORDINATES: protein motif:HMM:NF020478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity EipB family protein"
                     /protein_id="HEX3995707.1"
                     /translation="MPLPARLAAVFFLLGPGFLPHAAGAAPAPPPTRAPVPLAAHRAL
                     YELTRDNTAPSRGGREIASAHGTMGYEVADVCDGWATRQRLNMTITNADGQDTDMDSD
                     YATWESKDGLNFRFHMVQKSDTAVTNQTDGSAHLSRTGGPGEVEYRLPKETKTALPAG
                     TLFPMMHTIAIINAAREGKKFLALPLFDGTDDDGYEYSSIAVMDWKPPFQTQHSFLNT
                     LASTRVRIAFFDHAKEDTTPTYEVAMRYWENGVADNMVMDFEDFVMSAKLTELTPLPK
                     RC"
BASE COUNT         2466 a         4253 c         4219 g         2677 t
ORIGIN      
        1 gctgcctgga caatgaaaaa ctggtagccc cagaagatga agttcgccat tgtttcgcca
       61 ccgaacagac gagcccggca ggtgcgctgg acaacgtaga atgcggtcga gaacaacgcg
      121 catcccccaa acgcgaagat cgcggccgac gtgtgcaccg gccgcagccg gccgaaattg
      181 gtaaacgaga tcccaaggtt caacgccggc catgacagtt gggcggcgag cacaaccccc
      241 accaggaacg cgactacgcc ccagaacatc gacgcgatca ggaatttctt gacgatcgct
      301 tcgttatagc cgtcctccgg ccattgaccg acggtatcgt agtgccgctt caacaggccg
      361 aagtcgaaca ccactgcgaa tccaagcagc gataggccga acacataaat ttcgttgtcg
      421 gttgctccgg ccgcctggat caggccgatt agcccaagcg ccgcgaccaa caggccgatc
      481 gccgcgtccc cggctcggat gccacccatg tccttctcct tgtcgtgcgc aaacatacct
      541 gccgggtgtg cagtggtgcg gcattgaccc agatcaactc attgtttccc gaggcaaggc
      601 atacgattgg ccgtgctcga aatactgtcg caattcgccg cgtggtgcgg cacaccagtc
      661 tcaatgggcg gcaccctggc cgccggtatg gtgttggctg gcgcagcggc aagccctctg
      721 cattgcgctc ccatgtgcgg tggattcgta ttgggtcagg tgagcgaccg catggctcga
      781 ttgccgtcgg cacacctcag cgaatgtcag cgaatgcgag ccgcgtccct cgccccgtac
      841 catctcggcc gactcaccac ctattccgcc ctgggctttg cagccggcag cggcggcttc
      901 gcaatgcaat ggttaggggg caacgccggc gtgttcctgc tgatcggtgc ggcgctgctg
      961 gtgctacaag cggtgcgacg gctacgacca ggatttgggc tgccgttgac gcggaccctg
     1021 cgaggttacc cgttgggcgt cgcactcggc ttcctcccat gcggcatcct ctacgccgcg
     1081 ctggcagctg caggcgcgac tgcctcgccc atgtacgggg cactggctat gttctgtttc
     1141 ggccttggca cggtgccgac gctggtcacg atcggactgt ttggcgctgc cgccggccat
     1201 cggttccgcc gcggtctcac ggcaatgacg cccgcggttc tgctgttcaa tgcgggactt
     1261 ttgacattgc ttggcgtcag gttgctcgcc ggctcgtaat catcgggcag cgtcgccggc
     1321 tggtgtcagc gccaccgccg cctccgcggt gagcatcagg aatgtgaagg tctcctgcag
     1381 gtacaggcga acagcggtgt cgctgtggcc caagtaaccg atggaaatgt cctggccgat
     1441 gtgcagacag aaatcgccgc ctcgcgttgt cagcacgacg gccccggtaa tcgctggagc
     1501 ccagatgata tcttcgttca ccagtagttt gatgtgttgc agtaccgggt acccgtgatc
     1561 gtccgccgcg cccagtgcgg cgtatgcgtc ggcgccgagc agcacggaat aagggccgtt
     1621 cactccggcc agacgtaact ggctcaatgc cctcgcgatt gcgacggtgt agtccgccac
     1681 cacggcgggc aacggtatga ttggattgct ggtcgcttgc cgaatgcctt gaatggcgcc
     1741 tgcggcgtat ccgtcgaaga tcgcccggtc ctcggcgacc gcgatccgct cggccgcgtc
     1801 cttcagcggt tgccaatcag agtcgttgga gccgcgttca acatcgtcga ttgcggcgcg
     1861 gctaagctca aatggaacac gcagttcgat cagcggcttc acctcgcgct gacgggcgac
     1921 aatgccgtgg ccaggtgccg caatatcgcg ctgatggccg gtgccgatgg cggcgagcgc
     1981 agtgcctgca ggctcgctta cgtccaccac acgccgcgcg gcgagatacc gtttcagtgt
     2041 gcgcgctgct tcttcttcga tttgcgccca ggcggcgtca gaaatcgggg cgagttcgcg
     2101 atgcagattg ttcatgcctg ggggtttcct ttgagcgagc cgatgccgag cgaaccttcc
     2161 agcttaggcg gggccggctg gcgggtttca tcctgtgcgg tgttctctgg atccgccgga
     2221 ccttcagccg gcggcgggcc gtccaccacg ttgtccagga acgtcgcgga aggcacgaaa
     2281 aacagattgc cggtgatggc ccggctgaag tcgagcaaac gatcatagtt gccaggcggc
     2341 cgacccacga acatgttcgt cagcatctgt tcaatcgtcc gcggcgagcg tgcataaccg
     2401 atgaaaaagg tcccgaactc gccgacgccg acctgaccaa atggcatgtt ggcacgaacg
     2461 atcttgatct ctttgccgcc ttcctcaatg atcgtcagcg cattgtgggc cgaagttggt
     2521 ttaactgcat catcaagctc gatatcggaa agtttcgtcc gaccgatgat ccgttcctgg
     2581 gcttcggtgg gcaatgcatt ccatgccgcc aggtcgtgca gatatttctg cacaatgaca
     2641 tagctgccgc cggcgaacat cgggtcctcg gcgccaatga cggtggcatc gatggcggcc
     2701 tgatccgtcg ggttctcggt accgtcgaca aaccccagca agtcgcggtc atcgaagtat
     2761 tggaagccct gcacttcata caccggcgag accgcgccgc cgaggcggtc catgatatgg
     2821 gttgccagct cgaagcagag atccatacgc gtcgcgcgaa tatggaacag cagatcgccc
     2881 ggcgtggcga cggcatgacg cgggccggac tggatttccc gaaatggatg caactcggcc
     2941 ggccgcggtt cggcgaacag ccggtcccac aggtcggagc cgatacccag gatacaagac
     3001 agcttgccgc cgagatcgcg aaatccgacc gcgcgaagca gtccgctgag atcggcacaa
     3061 agcgattgca cggctgcgac gctgttggcg ccttcgttca ccgtcaccac caggaacatc
     3121 gcggctggtg tcagacttgc ggcgactggc tgtggaacag ggtgttctgc atccaccggc
     3181 gaggacgcaa tcatcggcct ggtctccccc ggggcggcac cgcacagttc gcggtcgcat
     3241 gcacaatagg ggatgccgcc gaacgacgcc agaccgagcg gctcgccgcg tgcctttacg
     3301 cgactgaacc attttctaca tcgtggccaa cactgcgaga gcggcgttcg tttgactact
     3361 gttcgctgcc gtaacgctcg acaccgacga tgcctggttc ggatggacct gacacgaaca
     3421 actcactcac ctgccgccgg tccgcgattc acttctccca gccgaacagc gcataacacg
     3481 cctccggcag ccgcggacgc ggcttgggcg ggcccggggg cggcgtcggt gcattaagcc
     3541 gatcgaacca ccattgcaac gatgcgtcgc acccatcgcc cggcggaggc ggtgcacgaa
     3601 ccacgcaatc agcctggcct tcaggacact tgaactcaat gtgcatatgc gccgaatggt
     3661 cgtaccaggg ccgaacgaag cgcagccagg atcggtcgcc gatcaccgtc cggcagagct
     3721 gttgtttgat cgccgcgtta accaacacgc gatccacccc gggcagcgtc gccgccagcc
     3781 ataacaatcg tgtggttgat tcgccccaca tcgacggcag gatatcgcgc ccatccggcc
     3841 gcaccaggct ggcgatttga atcgactcgc gatccgcctc gctcaaaaag cctcgcatgc
     3901 gcatgtcgag tgcgatatcg acgtccagcc cgacctggtg cgacgcatga ccaccgggca
     3961 tcgggccacc acgcggcagc gagatgtcct ccaccagcaa cggcggcatc ccgttctcgc
     4021 gcgccttccg gccaagcgcg atgacgccct ggatggtgac cggcgcgcca tagaaatgac
     4081 tgaatgagct gtggatggtc tgatacccgt cgccccgcgg cggcatggcc atcgcacctg
     4141 caatacagcc accattcgga ccgccaccaa tgatgtgcaa cggccccggc gcaggaggtc
     4201 cgctcgggcc gaactgcgcc ttggccgtgg tcgcggccag aaaggcaagc ccaaagagca
     4261 gcagccgaaa ccggttcaaa atttccgctc gaagaccgtg accacgtcgc ccggctggat
     4321 cagtccatcg cgcaagagtt taccctcaac cgaatcgccg tccgccgtgc ggacgaccga
     4381 agcatagtcc tgcaccgcgc gataggtgaa accaccggca accgccgcag cagacaccac
     4441 ggtcatgccg ggttggtaag gatactgacc gggcttgttg acctcgccga gaacataaat
     4501 cggccgatag gttgaaacct ccaccgaaac cgagggtcgc gtcagcatgc cgcgtctttt
     4561 caacatcgcg gccaccgctt cctcgagttg gtccggcgtt tggccagccg ctttgacgct
     4621 accagccagc ggaagcgaaa ccattccctg gtcgctgacc cggaattctc cggtcagcgg
     4681 atcctcccca taggtgatga tgcgcaccag gtcaccaggt gcgaggtggt actcaccgcc
     4741 cgacaggccc ggcagcggac gcagtccatg gccgggcgca caacatgcca gcagcagcga
     4801 gacagcaagc aatggcagca tttggcgcac gtgggtcctc cattttgggg tgaaccgtca
     4861 cactgcctaa tcgcgacaca tggaggattg gttaaggcca gcaagatttt tccccggccg
     4921 cgttaactcg ccgttcatgt cgcaccctta agaagcgatg tttccacagg cttcggtcag
     4981 gacgcgcggc gtcacgcgag cggcatgaga gagacgaacc cagaccccgt gacccggtcg
     5041 gcgtcaccga acgacccgtc ggcacggttg cccatccgac gcatatccat gagcgaggtc
     5101 atgcacatgc gcgccacgat cggtattttc cgccgccatc tgtgggcatt tctcacggtt
     5161 gcggcgctgg taccggcatg cgcctggatc gccatagagc gaaccacgcc gcgctacacc
     5221 gcttccggtt cgctgattta cgagccaagc gactacaatg tgcgggaact tgaaagcatc
     5281 ctacgcgctg acccgaccac cgaagcggtc atggcatccc aggcggaggt cctgcaaagc
     5341 ctgaagatcg cccaaagggt cgcccagcaa ggcaatttgt ttggcagtcc cgagttcaat
     5401 cccgcattgc ggccacgatc cgcgattcgg atggcggctg agtgggtgcg gtcggtgctc
     5461 ggacgcagca gcgagcgcga cctgccaaat gtaatctacg gcccggtgcc cgatcccagc
     5521 cgcgacgcaa cgatcctggc ggtacgcgac gcgttgcatg ccgaaccatt gcattcgtct
     5581 cgcgtgttgg aggtgacgtt caatgccgaa gaccctctcg tcgccgcggc cggcgtcaac
     5641 agtgcaatgg atatttacat caaggaccag ttcaccgcca aagcggcggc ggtcaggcgg
     5701 gcaacggcgt ggctcgacca gcgggccgat gcgttgcgcg gcgaagtgcg gaaggaagaa
     5761 aaccgtattg ccgcctatcg tgctgaacac aactttgctc agggaatgac ggcagggttg
     5821 gacgcagaaa agatctcgca tctgaacgaa aaccttagcc atgcgcgagc tgacctcgcc
     5881 ggtgccgatg ctcgtctcga tgccgctcga ggacgagtgg gggtcgaggc tcaggcagca
     5941 atcgcgacct ccgtggtgcc actgcggacc agtctcgagc agctcacggc gcagcagcag
     6001 gcgcagaccg cgaggcttgg cccgaaccac cctgacctcg agagcagcaa ccgccaggtc
     6061 gaacaggccc gacgggcggt ggacgcagaa atttcccggg tcgtcgccgc cacggcacag
     6121 gaacggcgca ccgcagcgga tcgcgttgcg ctgctggaag acaacctaca cgctgcccag
     6181 aaagaggccg ataacgaagc caaggcgcaa attccgttga atgcaatgga acgcgacgcc
     6241 gcggcggcgc gcgcccaatt gcaggctgtg ctggagcgaa ttcagcaaac cgcgcaacag
     6301 cacgcgctgg aaacctccga ggcgcatgaa atttccctcg cactgccacc ccggcgtcca
     6361 agctggccac ggcctctgcc gatgatggca gcggccatgg cagccggggt gttgctggga
     6421 ctgatgcttg tgtacctgct acacctgacc gattcgacgc tgcacagtgg cgaggacgtg
     6481 cgagcactgg cgaagcttcc ttgctttgcc ctggtgccgg agctgacgcg ccgcgacttg
     6541 cgtactaccc caatcgagga attcgtactc cgccgtccgc tcaccgccta tgccgagcaa
     6601 atccgcgcag tccgggctgg cctgtggtca ggtgtggagc gccccagggt ggtggcggtt
     6661 gccgcagcac gcccctccga ggggaagtct gtcctggccc tgtcgctcgc ccggtcggct
     6721 gcgctgagcg gcgaaaaggt gctgctgatc gattgcgaca tgcggcggcc gacgctcggg
     6781 catcggttgc gcgtcgccaa tggtccggga ttggccgacc tgttgcgtgg cgataacgga
     6841 atgttggatg tattgcacaa cgatcagtta ggcgcgcccg gcggcgggat gcatttcgtt
     6901 cctgccggcc aaccacgggg cgacacgttc ggcctgttca tgggcgcgga gatggcccaa
     6961 ctgctgctag aggcgcgtca gcactacact ctgatcattc tcgattctgc gccggtacag
     7021 gcgattactg aagcgcgagt cgtggcggcg atcgccgatg ccaccatttt ctgcatccgc
     7081 tggtgcgcaa cgccgcgcga catcgcaagt catgcattgg aattgctgga agacgcacat
     7141 gctcaggtcg cgggcgtcgt gctgacccgg gttgaccctc gtgcccattt gcgctcgggg
     7201 tacgctgacg cggaggtgta ccaccgccgc tacaaatcgt actttccggg gtgataacaa
     7261 acatggcgca gatttcgggc acgcggcgtt ttttggtcac tgggggcgca gggttcgtgg
     7321 gcagccacat ggtcgcggcg ttacgcgatc gcggcgacgc ggttgccgtg ttggacaatc
     7381 tgaatacggg ccatcgcgcg gcagtgcctc ctgatgtccc gctgatccag gctgaccttt
     7441 gcgacgtcgc gcgcctcgat gagatcctca gcgatggacc gtggactgcg gtgtttcatt
     7501 tcgccgggtg gacgcaggtg ggcgaaagca tgcggatgcc gatgcgttac ctgcaggaga
     7561 atgctggcaa cggggtccgg ctgattgatg cctgcgtccg aaacggcgtc gaccggttgg
     7621 tattttcctc gacagcggcg ttgttcaatg ctgccgatga cgcaccgatc cctgaggacg
     7681 cgccgattga tccgcaatcg ccgtacggcg atgccaaatg gatggtcgaa agagccctgt
     7741 actgggctgc caaggcgcac ggccttcgtt cggcgcggct gcgttacttc aatgctgccg
     7801 gtgccgaccc ggccgggcgg ctgggtgaag atcaccgccc cgagtcgcat cttattcctc
     7861 tggtgatcga tgcagtgtta ggccgccggc cgccactcga tgtgtatggc ggtgattatc
     7921 cgacgactga cgggacctgc gtgcgcgatt acgtgcacgt taccgacctc gccgaggcac
     7981 atttactggc gctggccagg ctcgacgctg atgcagaggt gacctggaat ttgggttgcg
     8041 gaaccggtca ttctgttttg caggtcatcg agtcggtgga gcgagtttcc ggccgtcggg
     8101 tgccttacca gattgccgcg cggcggccgg gtgacccggc agtcctcgtc gccgcatcgg
     8161 atcgtgcccg tgcaggcggt tggcggcctc gtcacgaagc gctggacgat atcgtgcgaa
     8221 ccgcattcgt ctggcgtgag gcgcatccgg acgggtatgg aacgtagtca gtccaggtta
     8281 tcgccgtccc ccggcctgat cggggagttt gccaagccgc gtggctcgac aaaattgcga
     8341 acggaaaaca ttctggcacc ttggctcgtg ccagtgctgt cggttgtttg tctggtctgg
     8401 ccggcgctgt ggaacggcta tccgatcgtg ttcgccgata ccgggaccta tttgtcacag
     8461 gcgatgcatc attatctcgg ctgggaccgg ccggtatttt acagcctctt catctggcca
     8521 tttcatcttg ggctgaccac ctggccggtt attctggtgc agtcgtgcat tacggtgacg
     8581 gtactggatc tgacgaggcg cgcgttcggt ctgacaatcg gttggctgct ggggctgacc
     8641 gggttccttg ctgtcgctac atggctgccc tggacggtat cggaactgat gccggatctg
     8701 ttcacgccgt tgatgatcct gttgttgggt ctgctggtct tccttggacc cgagcctggt
     8761 ctttggcatc gcgcagcgat caccgcgctg gcggcgttca tgattgcaac ccagcaatca
     8821 agtgttccgc ttgccatcgg gttattgatg gttgttatcc cgttacgacg gttcgtggcc
     8881 tcgtcctggg cgggcaaaag tactcgatac aattcctggt tcgtcatcct ggcaccgctg
     8941 ctggcgcctg ccgtggctgt cgtcgcactc gtgatggtaa atacgatagg cttcggacgt
     9001 atttccgttt cgccatatgg caacgtgttc gtcctggccc gggtcattta tgacggccca
     9061 ggaatgatgg tgctgcggcg cgattgcccg aatagtggct ggcgtctgtg ccgttacatc
     9121 gaccagttcc cctcaaccgc tgacgagttc ctgtgggacc agtcaagtcc catcatgctc
     9181 gcgggcggtc acaaggtgat ctcagcggag gctgacgcgg tcattcggga cgcggtcatc
     9241 tcgcagcccg accgcctgct gatcgcgacg tgggataata cgctcgaaca actggttcgt
     9301 ttcgcaagcg gcgacgggct ggaaagttgg aaccaacagg tcggactgtg gatcgaccgg
     9361 gactttcccg ccggagaacg caccacattc catactgcac gtcagcagtc agggaccctc
     9421 gggataccgt gggggctgac gatcgtacat cgcattacgg caattgccgg tattggcact
     9481 gcgctgcttt tggtgccgat cgcgtggcgc cggcggcacg tttctgcctg gttcctggcg
     9541 atcgcattga tggcattgcc actaagcgcc gcgatcacag gtggcctctc tacgccacat
     9601 gaccggtatc agagccggat cgtctggctt cccgccgccg tggtgtttct cacagtgccg
     9661 gcgctacttc gctgcaagcg atgcgacttc gcatgaacga ccgcgatcat cgctgcatcc
     9721 aaccaatccg aggtgagcag ggccagtcgg cacgcccaga ttcgccgcgc ccgatgatgg
     9781 ccgatgggtc gcgcttcggt ggccacgcaa gcagcgcgcc aagagggctc catgatttcc
     9841 cccgtgccgt aagccgcccg cgatgagcca caacgtcttc tggtcagcgc tggaagccgc
     9901 aggcgccgca atgttttcga ttgttgctgc cttcattatc gctcgcctga tcggtcctac
     9961 ggaactcggg acaggagcca ccgcggtcgc ggtgcacgtt ttgctttggg tcgccgtcaa
    10021 tgcgctgttc gcagacgcta tcgtgcagcg cgacacgatc aacgaaacca cgatcagcag
    10081 tgcggcctgg gcctccatcg ccttcggatg cggtgccgcc gcgctacagg cgggatcggg
    10141 atggctcctt gcctggatgc tggacgatgt acggttggtg ccgatggccc tgttgctcgc
    10201 ggtaccattc ccgtttgttg gcatgggtgg ggcgttgcaa ggactactga cgcgacagcg
    10261 gcgctaccgc gctttggcga tgcgtacgct gctcgggcaa ggcagcggca tggtcatcgg
    10321 gatcgtcctc gcctccgcgc atgccggagc gtgggcgttg gttgtgcagc aagcgaccgg
    10381 gtcgctgctc gcggcactgg tgctcatgag tgcggccagg tggcgaccac gggccgtttg
    10441 ccactggtct gaggtcgttt cgctgctgcg gattggcctg ccactgaccg cgagcacgct
    10501 gctgcaaatc ggccgttacc gcatctttgc gattctgatc ggaggcaccg ccggcgcgac
    10561 cgccctcggc caaattcacg ttgccttccg cctcgtggac acggttcggg agatcgcgtt
    10621 cacagcgtta tggcgcttgt tgctacccat cttgtctgag cgccaacacg acgatgtcgc
    10681 tctgttgcgc caggtcgacc aactactgcg gttttccagc atcggcatga tgccactatg
    10741 cagcggactg gcggtcggac tggttccgct gacaacactg ctcctcggtc ccacctggca
    10801 cgctgccggt gtggcggcag agcctctggt cgccttaaca gtattactgg cgctgatgtt
    10861 cccatccggt gtggcgttgg tcgcagtcgg tcaggcgcgt tactcgcttt atgcgaacct
    10921 tgcgggtctg ttggcgacct cggccttcgt attgctgctg cggccgacca cgccgtggat
    10981 ggccgtgctg gtctggtgcg gtgcgcaggc ttttatcagc ccttacagcc tatgggtgaa
    11041 cgcacgggcg cttggcgtcg ggctgctgcg gccattgcgc gctgggatac ccatgctcgt
    11101 ggtctcagcg attgccgcca gcgtcgcgat gatggtggat gcggggggat tgctggacat
    11161 attggtccgg cgcgccgcaa tcttcgtctt ggttttcgcc acatgcggcg gattgctgat
    11221 ttggtcgatg cgggcggcgt atttcggatc ggggcaaggc gccggtcatc gcttggaaac
    11281 cgatgccgtc cgaagcggga gcaaaagctc ctccatcatt cgcgcaaaaa tctgatccgc
    11341 ggttgccgat gcggcctctg ggcttggcac gaacaagcgt gcccgccagt gtttgaagat
    11401 cgcttgatcc gagcggtcag accttttcga cctggccgta ctccagttca accggcgtcg
    11461 aacgcccgaa gatcgacaca ctcaccttca atcggccctt gtcctcgtcc acttcctcga
    11521 ccgtgccgtt gaagctggtg aatggaccgt cggccacgcg cacctgctcg ccaatctcga
    11581 acagcactgc cggacgggcg cgctccaccc cctcctggtt ctgcttcagg atccgaattg
    11641 cctcggcctc actgatcgga ctgggcctgg tcttggagcc caggaatccg gtgaccttgg
    11701 gggtattttt gaccagatgc caggcgtcgt cggtcaggtc catcttcacc aggacgtagc
    11761 caggaaagaa cttgtgctcg gtattgacct tctggccacg acgaacctcc atgacctgtt
    11821 cagtcgggac cagcacttcc tcgaactggt cagccagacc gctctgcgcc gcctgctcct
    11881 tgatctgctg ggcgatcttt ttctcgaagc cggaatagac atgtacgacg taccagcgtt
    11941 tggccatgac ccaaaatcct tttagagatg cgcgccaaaa atcgcgcgca cgctcaggcc
    12001 gatcacctga tcgaccacga agaaaaatat cgccgtcatt gccgccatcg cgaacacaag
    12061 agcggttgtg accaacgtct cccgacgcga cggccaggtg accttggtta tctcggtccg
    12121 cacttcccga gcgaatttcg ccggttcaaa cgccacgctt accgcactcc aaaaagccgc
    12181 acactcgtct tgtcgtgaca gcgttccgct aacgctgcgc ctgggctgcc gtcgcgttcc
    12241 cgaggcgccg acgtccggaa gcgttggcag gggtggaggg tctcgaaccc ccaacctccg
    12301 gttttggaga ccggcgctct agccaattga gctacacccc ttccggccct gcctgaccag
    12361 gcagcttcgg gttccggcat tccccatccc ggcgcaccaa ccggagacca ccaaacggca
    12421 cgtcaggcgc cgcaaaaaag ggcgcgcggg ccacgaagtc aaggggtacg acatgtgcag
    12481 tgttcagcac cgcttcggca acggcgttag ttcggtcaat ttcgcactca tgacgaagtc
    12541 ttcgaaatcc atcaccatgt tgtcggcgac cccattttcc caataccgca tcgcgacctc
    12601 gtaggtcggc gtcgtatctt ccttcgcatg gtcgaagaaa gcgatccgca cccgcgtgct
    12661 ggccagcgtg ttcagaaacg aatgctgcgt ctggaacggc ggcttccaat ccatgacggc
    12721 aatcgagctg tactcgtagc catcgtcatc ggtgccgtcg aacagaggca gcgccaggaa
    12781 cttcttgccc tcgcgcgccg cgttgataat ggcaattgta tgcatcatcg gaaacagagt
    12841 gcctgccggg agagccgttt tcgtttcctt gggcagccgg tactcaactt cgccaggccc
    12901 gccggtccgg ctcaaatgag cgctgccatc cgtttgattg gtgactgcgg tatcggactt
    12961 ctgcaccatg tgaaaacgga aattcagtcc gtccttggac tcccaggtcg cgtagtcgga
    13021 atccatgtcc gtgtcctgac cgtcggcatt ggtgatggtc atgttcagac gttggcgtgt
    13081 agcccatccg tcacaaacat ccgcgacctc ataccccatg gtcccgtgcg ccgaagcgat
    13141 ctcacgcccg ccacgggacg gggctgtgtt gtcccgggtc aattcgtaca aggcgcggtg
    13201 cgccgccagc ggcactggcg cccgcgtggg cggtggggcg ggtgccgcac ccgccgcgtg
    13261 tggcaagaag ccggggccga gcaaaaaaaa tacagccgcc aggcgggcgg ggagtggcat
    13321 aagtaaactc cgtgagggtt ccggcgaacc gcaagatagt gggccgagcg gtttagcgcc
    13381 agcgatgggc tgtgggacat atatcttcca caacgtcacc atgttcggaa acggttgaaa
    13441 acttggtctt tcttcaggtt atgccgagct atccccacgg gcacggcgtc gcatccggcg
    13501 atcggatcag gtagcggccg aattggtgtt tacgccagtt gtcccaatag gcggaaagcg
    13561 actcgttcat ggcgaggctc agacgcccga catacgcacg tgactagccg ggcca
//
LOCUS       DATAVD010001633         2179 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2202414, whole genome shotgun sequence.
ACCESSION   DATAVD010001633 DATAVD010000000
VERSION     DATAVD010001633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2202414"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..614)
                     /locus_tag="VHX39_31440"
     CDS             complement(<1..614)
                     /locus_tag="VHX39_31440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3995708.1"
                     /translation="MSEKAYTMIPRVEFDPTAPAPLAGLRVVDLSRLVAGNMVSLQLA
                     DQGAEVIKIEDPKVGDPLRAWRVNGLSLHWKVYARNKKSLALNLRPPAGKEALHELLA
                     KSNVLIENFRPGTLEEMGFGPEVLHKRNPGLIIVRITGFGQDGPYRDRPGFGTLVEAM
                     SGFASKNGFEDRPPVLPPLAMADMISGLYGAYAIMVALRVVERGG"
     gene            808..1581
                     /locus_tag="VHX39_31445"
                     /pseudo
     CDS             808..1581
                     /locus_tag="VHX39_31445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006115104.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
     gene            1576..1953
                     /locus_tag="VHX39_31450"
     CDS             1576..1953
                     /locus_tag="VHX39_31450"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HEX3995709.1"
                     /translation="MITLSRVVGRPKRGTVARPLAAGVVLIGLLAGSTQARADDVVQL
                     AFTQHRFVPDHLTVPANVKFRVMVKNNDDTADEFESVDLNREKLVPPGQTTIVFLGPL
                     SPGQYKFFGDFHQDTAQGVMVAK"
     gene            1950..>2179
                     /locus_tag="VHX39_31455"
     CDS             1950..>2179
                     /locus_tag="VHX39_31455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995710.1"
                     /translation="MTPLKFVLAAGLVMLAPMEARADFHVVSPYEIDLGELEIEHNGS
                     AAFDRRSDQRGATSYTTEFGTGLTPWWHSEIE"
BASE COUNT          392 a          655 c          688 g          444 t
ORIGIN      
        1 ccgccgcgct ccaccacccg cagcgccacc atgatcgcgt aagcgccata aagtcccgag
       61 atcatgtccg ccatcgccaa cggcggcagc accggcgggc ggtcctcgaa accgttcttt
      121 gaggcaaagc ccgacatcgc ctccaccaac gtgccgaagc cgggacgatc gcgatagggt
      181 ccgtcctggc cgaacccggt gatccgcacg atgatcaaac ccggattgcg cttgtgcagc
      241 acctccggcc caaaacccat ttcctccagt gttcctggcc ggaaattctc aatcagcaca
      301 ttcgattttg cgagcaattc gtgcagcgct tccttgccgg ccggcggacg caaattcagc
      361 gcgaggctct ttttgttgcg tgcgtaaacc ttccaatgca gcgacagacc gttgacccgc
      421 caggcgcgca gcgggtcgcc aacctttggg tcttcgatct taatgacctc ggcgccctga
      481 tcggcaagtt gcaaactcac catgttgcct gcgaccaggc gggacaggtc gacaacgcga
      541 aggccagcca atggggctgg cgctgtggga tcgaattcaa cgcgtgggat catcgtgtaa
      601 gctttctcgg acacgcatta ctgcgacaga gcaaggtggc ccgcaagggt tgcactttac
      661 tcattatcgg cctccggaag cgctcgtcat tcgcactgcc agaacggccc cctggaggga
      721 tatgaagggc ttgcaggacc caggccagaa cgtgtagagg tgacttggtt gcaagtggtt
      781 cgcatttgca gacgaggaag cgccggcatg ttcgtcagta tgatcatagt cttccgcgag
      841 accatggaag ccggcctgat cgtcgggatc atcctggcag ccaccgcagg cgtcctgcaa
      901 cgagggaact ggatcgccgg cggtatcgca gccggagtgg ccggagccgc tttggtcgcc
      961 ctgttcgcca ccaccttatt cgatgcgttc cagggcgctg gccaggaggt cttcaccgcg
     1021 gcaattctgt gcttcgccgt ggcgatgctg acctggcacg ttggttggat ggcgcatcac
     1081 ggccgtgaaa tggctgccga aatgcgcaag gtgggagacg cggtgcggct tggccagcgt
     1141 tcgctcgcgg cactggcaat cgtcgttgcc gtcgcggtga tgcgcgaagg gtccgaggtc
     1201 gtgttgtttc tgttcggcat tgccgcaggt tccaacacga cgccgctgtc gcttgccatc
     1261 ggcggtgtcg tcggactggt gctcgccagc ggcgtttcgt ggttgctcta ccgcgggctt
     1321 gtgatcattc cgatgcaccg gctgtttgga gtgaccaacg tattgatcgc tctgcttgcc
     1381 gctggcatgg ccggtcaggc cgctgcgacg ctgcacgccg ccgatctgct gccgggctgg
     1441 ggcgagcaat tgtggaacac cagtcgtgtt gtgtccgatg acagcatcct tggccggagc
     1501 ctgcacgcgt tggttggcta ttcggcgcgg ccgagcggta ttcaactcgc ggcctggatc
     1561 gcgacattgg cggtgatgat cacgttgtcc cgcgtcgtcg ggcggccgaa gcgcgggacc
     1621 gtggcgcgcc cgttggcggc cggcgtggtg ctgatcggtt tactggcagg cagcacgcaa
     1681 gcccgtgccg acgatgttgt gcaactggca ttcacgcagc atcgctttgt gcccgaccac
     1741 ctcaccgtgc cggcaaatgt taaattccgt gtcatggtga agaacaacga cgacaccgcg
     1801 gacgagttcg aaagtgtcga tctaaatcgc gagaagctgg tcccgccagg tcagaccacc
     1861 attgtgtttc tcgggccgtt atcgccggga caatacaagt tctttggcga tttccatcag
     1921 gacaccgcgc aaggcgtgat ggtggctaaa tgacgccact aaaatttgtg ctggctgcgg
     1981 ggctggtcat gctggcgccg atggaggccc gcgccgactt tcatgtggtt tccccgtacg
     2041 aaatcgatct cggtgaactg gaaatcgagc ataacggcag cgcggccttc gatcgccggt
     2101 cggaccagcg cggcgcgacc agctatacca ccgagttcgg cactggattg acgccatggt
     2161 ggcacagcga gatcgagtt
//
LOCUS       DATAVD010001634         3757 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1455081, whole genome shotgun sequence.
ACCESSION   DATAVD010001634 DATAVD010000000
VERSION     DATAVD010001634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3757
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1455081"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(137..622)
                     /locus_tag="VHX39_31460"
     CDS             complement(137..622)
                     /locus_tag="VHX39_31460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1178 family protein"
                     /protein_id="HEX3995711.1"
                     /translation="MIHYQLRCDQDHEFDGWFNDSTGFEKQAKRGLIECPTCGATKVT
                     RALMAPAVTTRDTTRDSPEPKPPVPVQQVLPPARPPGPESGMPMPAQMVAMLQRMRAH
                     VEKNCDYVGPGFAEEARKIHRGEVEGRGIYGETTPEEAETLADEGIEIQSIPWVPPAD
                     G"
     gene            complement(720..980)
                     /gene="grxC"
                     /locus_tag="VHX39_31465"
     CDS             complement(720..980)
                     /gene="grxC"
                     /locus_tag="VHX39_31465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010665770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HEX3995712.1"
                     /translation="MAKVEVYTQPWCPFCERAMHILTTKKVAFEEIDAPHGSAERETA
                     KRRSGGRTTMPQIFIDDRHIGGCDDLVALDRAGKLDPLLQAA"
     gene            1579..2691
                     /locus_tag="VHX39_31470"
     CDS             1579..2691
                     /locus_tag="VHX39_31470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HEX3995713.1"
                     /translation="MHRHTDLSRRTILGGLGLAAASGLAIRPAQAKELVVGFIYVGAK
                     DDYGYNQAHAEAAAMLKKMPGVKIVEEEKVPETDDVSKTMESMIQLDGATLLFPTSFG
                     YFDPYMLKMAAKYPKIQFRHCGGLWQKDKHPMNTGSYFGYIGMGQYLNGIAAAHATKS
                     KKLGFIAAKPIPQVLINVNSFALGARSVDPSITTQVIFTGEWSMPVKEAEAANSLADG
                     GIDVLTFHVDGPKVIMETAERRGIFACGYHADQAKLAPKGYLTGAEWNWITVYKQFLN
                     DEETGKPLPNFVRGGLAEGFIKMSPYGPGLNADGRKNVDMVKAEILKGGFAVFKGPMK
                     DNKGTEVIPAGKAYPETAVELESLNYLVEGVHGAIA"
     gene            2697..>3757
                     /locus_tag="VHX39_31475"
     CDS             2697..>3757
                     /locus_tag="VHX39_31475"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3995714.1"
                     /translation="MSEVTTIAAGSPTRPTGGDTTYRWRRLLEALLAPLLALLAAMIL
                     FSIFLLALGQSPSDFLDLVWTGAFGSWFSWRNTLQRAAPLLLTSLCVALPGQLGLVVI
                     GGEAAVVLGGLAATIAALPLIHTNPLLVWTVMAIAGAGMGALWIGLTGFLRARMGVNE
                     VIASLVLAYIGIAVFNHLVEGVFRDPASLNKPSTHGIGDANMLGNVPWFDVHPGIPVG
                     VVACLMCWVLIYRTSIGFAGRVTGGNMRAAQLQGLPVARLIVLSCALGGACAGLAGTI
                     EVAAQLGRANASLAAGYGYTGILIAFLARFNPLAIMPMAVLLGGLGAAGGLLQRRMGL
                     PDATVQVLQGMIFVSILAS"
BASE COUNT          679 a         1129 c         1170 g          779 t
ORIGIN      
        1 cggtcgtggt ggcgcctgca ccggtggtcg tcggcccagg ttactggcac tggtatcatg
       61 ggaggcgcgt ttgggtgcgg cgtcgttact ggcatcaccg gcattactga gccggagtga
      121 ctgaagaggg tgacgcttaa ccgtcggccg gaggcaccca gggaatgctc tggatctcga
      181 tgccttcgtc ggccagcgtt tcagcctcct ccggcgtcgt ttcaccgtaa atgccgcgcc
      241 cctcaacttc gccgcgatgg atcttgcgcg cttcctcagc gaaacctggg ccgacgtagt
      301 cgcaattctt ctccacgtgg gcacgcatgc gttgaagcat tgcaaccatt tgcgccggca
      361 ttggcatccc ggactctggc ccgggtgggc gtgccggagg cagaacctgc tgtaccggaa
      421 ccggcggttt gggctccggc gaatcgcgcg tggtgtcgcg cgtcgtgact gcgggtgcca
      481 tcagagcccg cgtgaccttg gttgcgccac aggtcgggca ctcgatcagc ccgcgcttcg
      541 cctgtttctc aaatcccgtg ctgtcattga accaaccatc gaattcgtgg tcctgatcgc
      601 agcgtagctg gtaatgaatc attctcgaac ccggcctgat ccggtggccc catgccacgg
      661 acccgttaac gaatttggta ctccctggca ctcaaagcaa gagagtgcca acccccgtct
      721 tacgctgcct ggagcagcgg gtccagtttt cccgcacgat ccagcgccac caggtcatcg
      781 cagccgccga tatggcggtc gtcgatgaag atttgcggca tcgtcgtccg cccgccggag
      841 cggcgctttg cggtctcgcg ctcggcggag ccgtgaggtg cgtcgatctc ctcaaacgcc
      901 actttcttgg tagtcaggat gtgcatcgct cgctcacaga acgggcacca gggttgcgta
      961 tagacttcaa ctttggccat ttgcgtcacc tctgtgacgg aatgtcggat catttcccag
     1021 gcgtcgcaag tccgttgtga ctgcatgact gccgatatcc ggaagcgcag ggaagctgca
     1081 ggcgaaccgg gtgaaaattc atgccctgat gaggcgtgtg aggaactcgt cgttccaacc
     1141 tgcgagcttt cgtcgaagtc gcagtgattc cttgccggtt tgtcatttct cgccttggct
     1201 tcaaacctgg cgaaggtttc gagcacagtg ctgagcttcg acagggcggg atcaatgcta
     1261 tcacccggcc gagaagcgaa tgaccatcgg ctcatgcccg ctggagcgtc ccggcttcgg
     1321 catggcgcgc ggcgatggcg cataatgttg cggcacacgc gtcatatgtg accgatcaaa
     1381 gaccattttg tgaccacatg gctaaatcct cctcaattct gacccttgcg atcctcagat
     1441 cgaggcgaaa gtgtctgggc gtgttgcctg gcatatggct tgcgtgccgg tttcgaggtt
     1501 cagattgatg tcgcacggct cgggtctgcc ggcgatcgat aacgccgcgc aaaaccgcgc
     1561 caacgagggg aacatcacat gcatcggcac accgacctgt ctcgccgcac gattctggga
     1621 ggtcttggcc tcgccgctgc ctccggtctg gcgatccggc cagcccaggc caaggaattg
     1681 gtcgtcggat ttatctacgt cggggcaaag gacgattacg gctacaacca ggcacacgct
     1741 gaagccgccg cgatgttgaa gaaaatgccc ggcgtcaaga tcgttgaaga agagaaggtc
     1801 cccgagacgg acgacgtttc gaagaccatg gagagcatga tccagttgga tggcgcaacc
     1861 ctgctgtttc ccaccagctt cggctatttc gatccgtata tgctgaaaat ggcagccaaa
     1921 tacccgaaaa ttcagttccg tcactgtggc gggctatggc agaaagacaa gcacccgatg
     1981 aacaccgggt cgtatttcgg ctatatcggc atgggacaat atctcaacgg catcgccgcc
     2041 gcacatgcaa cgaaatccaa gaagctcggc ttcattgccg ccaaaccgat cccgcaggtg
     2101 ctgattaacg tcaacagttt cgctcttggc gcccgttcgg tcgatccgtc gattaccacc
     2161 caggtgatct tcaccggcga gtggtcgatg ccggtcaagg aagccgaggc ggccaacagt
     2221 ctggccgacg gcggcattga cgtgctgacc ttccatgtcg atggccccaa agtgatcatg
     2281 gagactgccg agcgccgcgg cattttcgcc tgcggctacc atgccgatca ggcgaaactg
     2341 gcaccgaagg gatatctgac aggtgcggaa tggaactgga tcaccgtcta caagcagttc
     2401 ctcaacgatg aggagaccgg caagccgctg ccgaacttcg tgcgcggcgg actggccgaa
     2461 ggcttcatca agatgtcgcc gtatgggcct ggcctgaacg cggacgggcg caagaacgta
     2521 gacatggtca aggcggagat actcaagggt ggtttcgcgg tcttcaaagg gccaatgaaa
     2581 gacaacaaag gcaccgaagt cattcccgcc ggcaaagcat acccggagac cgccgtcgag
     2641 ctggaatcgt tgaactacct ggtcgagggc gtgcacggcg cgatcgcctg acggcgatga
     2701 gcgaggtcac cacgattgcc gccggctcgc caacgcggcc caccggcggc gacaccactt
     2761 accggtggcg tcgcctgctg gaggcgctgc tggccccgtt gcttgccctg ctggctgcga
     2821 tgatcttgtt ttcgatcttc ctgctggcgc tggggcaatc gccgtccgat ttcctcgatc
     2881 tggtatggac cggcgccttc ggcagctggt tttcgtggcg caacacgctg caacgagccg
     2941 caccattgct gctgacgtcg ctatgtgtcg cgttgccggg acagctcggt ctcgtcgtca
     3001 tcggcggtga agctgcggtc gtgctcggag gtctggccgc cacaattgcg gcgctgccgc
     3061 tgattcacac aaatccgttg ctggtttgga cggtcatggc aattgccggc gccggcatgg
     3121 gcgccctgtg gataggcctg accggctttc tgcgcgcccg aatgggcgtc aatgaggtca
     3181 tcgccagtct ggtgctcgct tacatcggga tcgcggtatt caaccacctg gtggagggcg
     3241 tgtttcgcga ccccgccagc ctgaacaagc catccaccca tggcatcggc gatgccaaca
     3301 tgctgggtaa tgtgccgtgg ttcgatgtcc atcccggaat cccggttggc gtcgtcgcct
     3361 gtttgatgtg ctgggtgctg atatatcgta ccagcatcgg tttcgccggc cgcgtaaccg
     3421 gcggcaacat gcgtgcggcc cagttgcagg ggctgccggt ggcccggctc atagtcctgt
     3481 cttgtgcgtt agggggcgcg tgcgctggac tggccgggac catcgaagtg gccgcgcagc
     3541 tcggtcgggc taatgcctcg ctggccgcgg gctatggcta caccggcatc ctgatcgcct
     3601 tcctggcccg cttcaacccg ctggcgatca tgccgatggc cgtgctgctg ggtggcctgg
     3661 gtgcggcagg cggtctgtta cagcggcgca tgggcttacc tgacgcgacg gtgcaggttc
     3721 tgcaagggat gatcttcgtc tccatcctgg cgagcga
//
LOCUS       DATAVD010001635         4804 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2016340, whole genome shotgun sequence.
ACCESSION   DATAVD010001635 DATAVD010000000
VERSION     DATAVD010001635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4804
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2016340"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(293..1153)
                     /locus_tag="VHX39_31480"
                     /pseudo
     CDS             complement(293..1153)
                     /locus_tag="VHX39_31480"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
     gene            1230..1421
                     /locus_tag="VHX39_31485"
     CDS             1230..1421
                     /locus_tag="VHX39_31485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995715.1"
                     /translation="MNGAAELTLKRYRVAVLFNPTRVKNCRRWYNIVTGPILLAGLLI
                     LGIGPMRAAGDPAKDKQRI"
     gene            complement(1494..2309)
                     /locus_tag="VHX39_31490"
     CDS             complement(1494..2309)
                     /locus_tag="VHX39_31490"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEX3995716.1"
                     /translation="MFASFALTVSLFAAAPCHAGANNAAPGAACISAIAAAGSEEGVP
                     AGLLLAIGRVETGRRSAAMGQIAPWPWSIDADGMGRFLSTETQAIDAVRTLQEQGVSS
                     IDVGCMQVNLQQHPDAFASLEQAFAPVTNADYAARFLRALFSETGNWIAAVAAYHSRT
                     PDLAAPYQRLVLNAWYGDGAFAPGWPVAAMSPRLGAGHMPGLRPFSPSPLPATSAGSV
                     DAAPLLRAMSACLSTAPADSVHSWSLSAAAPCRRSPFASTARLMRVLSGKSIQ"
     gene            complement(2342..2917)
                     /locus_tag="VHX39_31495"
     CDS             complement(2342..2917)
                     /locus_tag="VHX39_31495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995717.1"
                     /translation="MQRRGAEAIFAPHARALRSVPPLAVAEELVPQPGGAFQVRSAQR
                     HTLSPPSGTFNFVRVQGSTPRARQVLVSAKLAHAQLASGRPVIYAGTARFDRGEMVWW
                     SNYSGTYQPIAAFRAQAGLPEDKFMPWQRLQMGGVAMQRGTFIERRATEPAVTRPPAP
                     QPAAKTPAKTGSQPSNTNMTGGRRGPSPARG"
     gene            complement(3534..3854)
                     /locus_tag="VHX39_31500"
     CDS             complement(3534..3854)
                     /locus_tag="VHX39_31500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995718.1"
                     /translation="MAKPIRLRLQHPILNNRQGAARRPHAPRALLHHMRELMPQQLLA
                     LHRIRLKPAGREIHVVAHGEGHRANTLRLGPHMHTHGGKIGPQRCLHLATHRIWQRLS
                     SASD"
     gene            complement(4163..4410)
                     /locus_tag="VHX39_31505"
                     /pseudo
     CDS             complement(4163..4410)
                     /locus_tag="VHX39_31505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611773.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(4441..>4804)
                     /locus_tag="VHX39_31510"
     CDS             complement(4441..>4804)
                     /locus_tag="VHX39_31510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995719.1"
                     /translation="AEGPCRTYAPAGTVASEGTMRHGRPHGVWTIRRPDGSVQQSLTY
                     ADGVLEGEACDRDAAGVVRRRAAYRGGRLDGEVVEYNAAGQITKRTTYVAGREVAPPP
                     IARSPKPWWRKPFGGSGM"
BASE COUNT          894 a         1503 c         1528 g          879 t
ORIGIN      
        1 cgcatcgatc gccgacttgc cctgtgaggt caaaacctcc acctgacgca gcttcgctat
       61 aatctcctcg ggtttgtata tcttacgcgg catcactcgc ccctcctcgc caaaaactac
      121 attaaaagag gatcaattct aggggggcag aacggatcag cccgcaatcc gaggcactca
      181 tcacccgccg ctcgacgcgg ttcaggtggc cctcatgcac gcgccgatag gcgtcgccat
      241 ggcgacgaaa gacgtccgca acctccagat ttgttggcac ggtagccgcc gcttaaggcg
      301 gtggcacgac ctcaatcgtc agtcgatcaa gcgggctatc ggtctgccgg atcagaccgc
      361 tcgagacatg ggtatagcgc gccgtgctcg atagattgct gtgtcccaga agaacttgga
      421 tgatgcggat atcggtgccg ctttcaagga gatgcgcagc aaatgaatgg cgcagtgtgt
      481 gcacggtgac acgcttggtt aaaccagagg ccgcgcaagc cgaacgacag gcggaatgca
      541 aaacgttcac ttcaatcggg ttgcccggat cgcgtccagg aaataaccaa tccttgggcc
      601 gggcaagccg ccagtaagtg cgcagaatcc caagcattta ggcggacagc atgacatagc
      661 gatccttgct gcctttaccc tgttggaccc ggatgaccat ccggtcgctg tcgttattag
      721 cgaccttgag agagaccgcc tcggacgcgc gcagcccagc ggcgtacgcg gtagtcaggg
      781 caacacgggt tcgcaggctg ggcaccgctt ccagaaaccg taccacctcg ccggcactca
      841 gtacctccgg caacttccgt ggctgccgag catacacaat ccgctctggt atctcgtcac
      901 gccgcaacgt gacgccgtag aaaaaccgca gtgcgcagac gacctggttc agcccgggcc
      961 atgagatccc cttggcaacc aggtgcacct gaaacgtccg aacatcttcc aaatccagcc
     1021 gatctggtga acggccaaaa aaacgactga acttggcaac cgcgctaatg taagatcgtt
     1081 gtgtcgccgg tgataaattg cggaccgtca tgtcctcggt catacggcgg cgtagaggac
     1141 tgatctcagt catctgaggc tcctgtctgt tgaggttagg ttgggcaacc caaatctctc
     1201 agacaggaga acgactcgtg aagtgcgccg tgaacggcgc cgcagaatta accttgaaac
     1261 gttaccgcgt agcggttttg ttcaatccca cacgagtcaa aaactgccgc cgttggtata
     1321 acatcgtaac aggcccgata ctgctggcgg gcttgctcat cctgggcatc gggccgatgc
     1381 gcgcggctgg agatcccgcc aaggacaagc agcggattta aagcatttac agagagggcc
     1441 cgcgcgatgt tgttcttccg ttttcctggt aaaaatcgct gctgtcctta cgcttactgg
     1501 atcgacttgc cggatagtac ccgcatcagt cgcgcggtgc tcgcgaaggg cgacctgcgg
     1561 cagggtgctg cggccgagag cgaccatgaa tggaccgaat cagccggcgc cgtcgataga
     1621 cacgcggaca tagcccggag aagtggggcc gcgtcgacgg acccggcgct cgtggcgggg
     1681 agcggtgacg gtgaaaaggg acggagcccg ggcatatgcc cggcccccag gcgcggagac
     1741 atagccgcca ccggccagcc tggtgcgaac gcgccgtcac cgtaccaggc attcaggaca
     1801 agtctttgat atggggccgc gaggtccggc gtgcgcgaat gataggcggc aaccgcggcg
     1861 atccagttgc ccgtttcgct gaacagcgcg cgtaggaacc gcgccgcgta gtccgcattg
     1921 gtaaccgggg cgaacgcctg ctcgaggctc gcgaatgcgt ctgggtgctg ctgcaggttc
     1981 acctgcatgc agccgacgtc gatagagctg acgccctgtt cctgcaacgt acgcacggca
     2041 tcgatcgcct gcgtctcggt cgataaaaaa cgacccatgc cgtccgcatc gatggaccat
     2101 ggccacggcg cgatttgacc catagccgcc gagcggcgcc ccgtctccac ccgcccgatc
     2161 gctaacagca gccctgccgg cacgccttct tccgaccctg ccgccgcaat ggccgaaatg
     2221 cacgccgctc cgggcgccgc attgtttgcg ccggcgtgac acggcgctgc cgcaaataac
     2281 gagaccgtca gcgcgaacga agcgaacaag gtcgagaagc ggggaccgac ccacaacggt
     2341 gtcatccccg cgctggcgaa ggcccacgcc gcccgcccgt catgttcgtg ttggacggct
     2401 gggagcccgt cttcgcgggc gtcttggcag ccggctgggg ggccggaggt ctcgtcaccg
     2461 ccggctctgt cgcgcgccgc tcgatgaacg tgcccctctg catcgccacg ccgcccatct
     2521 gcagcctctg ccagggcatg aacttatcct ccggcaagcc ggcttgcgcg cgaaaggcgg
     2581 caatcggctg gtaggtacca gaatagttgc tccaccagac catctcgccg cgatcgaagc
     2641 gcgcggtgcc ggcatagatc accggccggc cgctggcgag ttgcgcgtgc gccagcttgg
     2701 cgctgaccag cacctggcgt gcgcgcgggg tgctgccctg cacgcgaacg aaattgaacg
     2761 tgccgctcgg cggtgacagc gtgtgccgct gcgctgaccg cacctgaaac gcgcctccag
     2821 gctggggaac cagttcttcc gcgaccgcga gcggcggaac cgaacgcagc gccctcgcat
     2881 gcggtgcaaa tatcgcctca gccccacgac gctgcatcga aacgccacct gtcctcgcga
     2941 cgccttgcgt gcccgagttc gggagcggat gacggggaaa gaggtggttc atcgcatgac
     3001 caatccttgg catgagagaa gtatgatccc aagggggcgt ttactgcaac aaggacgtcc
     3061 gcggcaggct aacaacccgc gtcgcctgtc tgcgaagcga ggaggaaggc tgctttttga
     3121 gaacggcctg ttatcggcgg ttggggcacg ctctagccgg aaacgccacc atgatggaaa
     3181 ttattttgat tgcctgctac atgagcggtg aacggcgcag cagcgcaccc gcagctcccc
     3241 tgcatcggga agaatgttag gagcccggca ttagcttggt ttagaaggtg ggtgctgggc
     3301 gcggattgtg aagcgtgtgg ttgcaggagg cgtgtgcgat gaccgggtgc gtcattcagg
     3361 ggttttttcc ggacggcagg gtgaagctgg cgcctaccgt tgcgatggcg gtacagccaa
     3421 aagctgggcc gcgtccgccg gggccgccag tgccggcttt tgtctcgcgg gctccggtgg
     3481 tgcagttgcg cggtgcggcg gactcgttcg cggtcgatcc aaggcggtta gggctagtcg
     3541 ctggcggagg aaagcctttg ccagatgcgg tgcgtggcca gatggaggca gcgctggggg
     3601 ccgatttttc cgccgtgcgt gtgcatgtgg ggccccaggc ggagcgtatt ggcgcggtgg
     3661 ccttcaccat gggcaacgac gtgtatttcg cgcccggccg gtttcagccg gatacgatgc
     3721 agggcaagca gctgctgggg catgagctcg cgcatgtggt gcagcagcgc gcggggcgcg
     3781 tgcgggcgcc gggcggcgcc ctggcggttg ttcaggattg ggtgctggag gcggaggcgg
     3841 atcggcttgg ccatttggca gcgtcgcatg tggcgcaacg aatggcggtg catgggccga
     3901 tcggaaggtc cacctcggcg tctgccacgc tgacccaggc gaagtttggg ttaacgcgac
     3961 tgtaccaaaa tagcccgcca caaccactca atggtacatt gcagaaagtg ggatctgctt
     4021 cttccccgcc gattgctggc tcggtgcggg gtccattcac tgcgcttagc tcttgcagga
     4081 agcaggtgca aaaggtcgcc ccgctgggcg accagcatac ccggccgggt atcatccgtc
     4141 aggttttatc cggtgtccgg tgtggtgctt tgcgctgcgt ggagcggtgc tgtcccagga
     4201 cccggcacgc acggcgctgc gacacgccta ggcttgcctg tacttgtccc acgcgggcgc
     4261 ggcgacgggc ggggcttaaa agtttccccg tgcagcctca gccaaaatct gcttatccaa
     4321 agtcagatca gataccgcct gccgcagacg tttgttctca agttcaagct ctttcaaacg
     4381 tttaagctga tcgaccttca tcccgccata agcggccgct ttcctctctc tgggaagccc
     4441 tcacattcca cttccgccga atggcttgcg ccaccagggc ttaggtgagc gagcgatagg
     4501 cggcggcgcg acctcgcggc ctgcgacata cgtcgtgcgc tttgttatct gtcctgccgc
     4561 gttgtactcc acgacctccc catccagccg ccccccgcga taggccgcac ggcgccgcac
     4621 gaccccagcc gcatcacgat cgcatgcctc gccctccagc acgccgtcgg cataggtcag
     4681 cgactgctgc acgctgccgt ctggccggcg aatggtccac acgccatgtg ggcgcccgtg
     4741 ccgcatcgtc ccctcgcttg cgactgtgcc ggcgggcgca taggtccggc atggtccctc
     4801 ggcg
//
LOCUS       DATAVD010001636         2449 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2578513, whole genome shotgun sequence.
ACCESSION   DATAVD010001636 DATAVD010000000
VERSION     DATAVD010001636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2578513"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..281
                     /locus_tag="VHX39_31515"
     CDS             <1..281
                     /locus_tag="VHX39_31515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEX3995720.1"
                     /translation="CLLLVVPLLGYLTAAASPTMVPTLFFLFLNVPHVIAPDQAVFDV
                     IRPVHKWLAIGLIGLAIWHGWQMRHIASGSRRVRMARSPNAHPPAKPG"
     gene            253..1233
                     /locus_tag="VHX39_31520"
     CDS             253..1233
                     /locus_tag="VHX39_31520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEX3995721.1"
                     /translation="MRIHLQNPVDDPLFDFSEAMWATAVARAPDTSGGHVISIGQTDA
                     DLTSAMTDAEALICDVSVIKAQFPCAAPRLQLLFVTNAGLDRLAPFDWLPPGVILMNN
                     RGTHAVKSGEFGIMAVLMLANRVPEMVTHQREGRWHKLWGAVVTAQPITIVGLGTLGG
                     AVARHAAGFGMTVTGVRANPAPHPFCAQVMGVDGLDAALRGTKFLVLACPLTDATRSM
                     IDRRRLALLPDGAGIVNIGRGELIDQDALCDQLDASRLSGAVLDVFDPEPIPPGHRLW
                     TTRNLIISPHTSADDPATYNAISLDLFFENLRAWRNGNPLPNRYGITRGY"
     gene            1939..>2449
                     /locus_tag="VHX39_31525"
     CDS             1939..>2449
                     /locus_tag="VHX39_31525"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3995722.1"
                     /translation="MEFGMFHEFQRRPGQTEAEAFTESFEQVDEAERAGLDVMWLAEL
                     HCAPERSVLAAPLNIATAIASRTKRMKIGTAVQVLPLCHPLRIAEEATTVDHISHGRL
                     IMGVGRSGFPRTYQAYGISYAESRERFAEVMEILKRAWTQEIFSFHGQFYNFENVCLV
                     PKPYQTPYPE"
BASE COUNT          476 a          739 c          732 g          502 t
ORIGIN      
        1 actgcctgct attggtggtc ccgctgctgg gttatttgac cgctgccgct tcgcccacca
       61 tggtgccaac gctgtttttc ttatttttga acgtgccgca cgtgatcgct ccggaccagg
      121 cggtgttcga cgtgatccgt ccggtgcata agtggcttgc aattggattg attggcctcg
      181 cgatctggca tggctggcaa atgcgccaca ttgcctctgg ttcgaggcgt gtccgcatgg
      241 cacggtcgcc gaatgcgcat ccacctgcaa aacccggttg acgatccgct gttcgacttt
      301 tccgaggcga tgtgggcaac ggcggtggcg cgtgcgccgg ataccagcgg cggccacgtt
      361 atcagcatcg gacagaccga cgccgatctt acttcggcga tgaccgacgc cgaagcattg
      421 atctgcgatg tcagtgtcat caaggcgcag ttcccctgtg cggctccgcg gctgcaattg
      481 ttgttcgtta ccaatgcagg gcttgaccgg cttgctccgt tcgattggct tccgccgggc
      541 gtcatcctga tgaacaaccg cggcacgcat gctgtgaagt cgggcgagtt cgggatcatg
      601 gcagtgctga tgctcgccaa tcgggtgccg gagatggtga cacatcaacg tgagggacgt
      661 tggcacaaac tctggggcgc ggtcgttacg gcacaaccga tcaccatcgt tggcctggga
      721 actttggggg gagccgtcgc gcggcatgct gccgggttcg gtatgacggt gaccggcgtg
      781 cgagcgaacc ctgcgccaca tccgttttgc gcccaggtga tgggggttga cgggttggac
      841 gcggcgctgc gggggacgaa gtttctggtg ctggcctgcc cgttgactga cgcgacacgg
      901 agcatgatcg ataggcggcg actggcgttg ctgcccgacg gcgccgggat tgtgaacatc
      961 ggccgcggcg agctgatcga tcaggatgcg ttgtgcgatc agctcgatgc aagccgattg
     1021 tccggggccg tacttgacgt gttcgaccct gagccgatcc caccaggtca tcggctttgg
     1081 accacgcgga atctgatcat cagtccacat acttcagccg atgatccggc cacttacaac
     1141 gcgataagtc tggatctttt cttcgaaaat ctacgcgcct ggcgtaatgg gaatccattg
     1201 cctaaccggt acggtatcac gcggggttat tgaagggcag gctcactgtt tcgcgttggc
     1261 acggttcgtg ccatgagcca gggaagttga cttccataaa cgcgtttgat cgaaattgca
     1321 tcgagatcaa cgtcttcgag acaccgaacg ttaatcgtcc acaccgaagg gtcagtgcgc
     1381 ggcctgcgga atggcagaat gccgcaattc gggcagaagt agtctttcgc agtgcgggtg
     1441 tggaaggtgt agagcgacag gtcctcaatc gatgagagca aacggaaatc agcgggatcg
     1501 acccggtgat tgagcgcacc gcgccgccgg caaatcgagc aatcacagac ccgaacatgg
     1561 tctaagtcgg catcgacctc gaattgcacc cttccgcaat gacaagagcc acgataagtc
     1621 tgtttcatgt cgtcatgcct cctgttggcc gcgcaagcag cggcgtcatt cccttgttca
     1681 ctccgtcttg cgcggggccg gcgcctcccc gagccaatct tccgcccgca atccctcgac
     1741 ccggttgaag tcccgcaact tgcgagtaat tggcacaagc cccaggactc ctggcctggc
     1801 cggctattaa cagatcgtaa ccgctttcaa gcacccatgc tgtggataaa tctggcaagc
     1861 ccagcccaac ccaccccagg gggacttgca accgtcgcca aacctgtcac ttttccgcca
     1921 taacaaggag aagtgaccat ggaattcggt atgttccacg aatttcagcg ccggcccggc
     1981 cagaccgaag ccgaagcttt cacagagtcg ttcgagcagg tcgatgaggc cgagcgcgcc
     2041 ggcctcgatg tcatgtggct ggcggaattg cactgcgccc ccgagcgctc ggtgctggcc
     2101 gcgccactga atatcgcaac cgccatcgcc agccgcacca agcgcatgaa aatcggcacc
     2161 gccgtgcagg tgctgccgct gtgccacccg ctgcgcatcg ccgaagaagc caccaccgtc
     2221 gatcacatca gccacggccg gctgatcatg ggcgtcggcc gtagcggctt tccccgcact
     2281 tatcaggcct acggaatttc ctacgccgag agccgggagc ggttcgccga ggtgatggaa
     2341 atcctcaagc gcgcctggac gcaggaaata ttttcgttcc atggccagtt ctacaacttc
     2401 gaaaacgtct gtctggtgcc caaaccctac cagacgccgt accccgaac
//
LOCUS       DATAVD010001637         2216 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2578540, whole genome shotgun sequence.
ACCESSION   DATAVD010001637 DATAVD010000000
VERSION     DATAVD010001637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2578540"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..484
                     /locus_tag="VHX39_31530"
     CDS             <1..484
                     /locus_tag="VHX39_31530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003623931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /protein_id="HEX3995723.1"
                     /translation="AGAVFLRAGQGSGADQGILSTHLHAQGSLGDILYVDGAVGQRGK
                     PGHLVMNGREVFRHAVNLLAEAVEEALAANGLTRRDIDWLVPHQANQRIIDGMGRKLG
                     LAKDRVVVTVDRHANTSAASVPLALCEAWRDGRIKRGDLVLLEALGGGLAWGSALVRI
                     "
     gene            complement(500..>2216)
                     /locus_tag="VHX39_31535"
     CDS             complement(500..>2216)
                     /locus_tag="VHX39_31535"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3995724.1"
                     /translation="IVAQTLNDSMIIAHGADPRLNGKRSSAKVASGAPLIDLIKEVLR
                     NTDKGFVSYMFAKPGETQVQPKIAYVARFAPWDAVFTIGAYTGDLDASFNAFAERLAA
                     IAGPVLLVTLVVAWLINRDITLSLGGLQSAMDRLAKGDLATLIPGAGRGDEVGGMAAA
                     VQVFKQAQEEAVDLRKEQAAARDAAEIAKQAALSGMADKIEADSGHAVEAISERTGAM
                     TTTAKEMRDLAARVGQSAEGASQAAGLALANAQTVASAAEELATSIREISGQVNHSTA
                     TINLAVEAGTATRGTIEALNERVGRIGAVAEIISDIAAKTNLLALNATIEAARAGEAG
                     RGFAVVASEVKQLANQTARSTEEINRHIADVRSATADAVTAVSRITTTIGEVNTIANS
                     IAAAVEEQGAATAEIARGVTETATAVNSMSARNTEVSREAGVAGQYADTVLGGTQVLN
                     EAIGELRRTLIRTVRTSTSEVDRRRLQRVDVALACQIEVPGRSAMPAQVSDLSEGGAR
                     VTDASDLTLGTSGRLRITGLGVPLPFRVSGVDGSDAHLSFETNDAGREALRGLLSGTL
                     VRRAA"
BASE COUNT          358 a          744 c          706 g          408 t
ORIGIN      
        1 cgctggtgct gtgttcctgc gtgccggcca gggcagcggt gccgaccagg gcattctcag
       61 cacccatctg catgcgcaag gcagcctggg cgacattctg tacgtcgatg gcgccgtcgg
      121 gcagcgcggc aagcctgggc atctggtgat gaacgggcga gaggtgttcc ggcatgcggt
      181 caacctgctt gccgaagccg tcgaagaagc actggccgcc aacggactga cccggcgcga
      241 catcgactgg ctggtaccgc accaggccaa ccagcgcatc atcgacggca tgggacgtaa
      301 actggggctg gcgaaggacc gggtggtggt gacggtggat cgccacgcca acacgtctgc
      361 cgcctcggtg ccgctcgcgc tgtgcgaggc atggcgcgac ggccgcatta aacgcggcga
      421 tctcgtgtta ttggaggctc tgggcggcgg cctcgcctgg ggctccgccc tggtgcgaat
      481 ctagcggccc gtcgccgcgt tacgcagcgc gccggaccaa ggtccccgac agcaaaccac
      541 gcaaagcctc acggccggca tcgttcgttt caaatgacaa atgagcatcc gagccatcga
      601 cgccgctcac tctgaatggc agcggcacac ccagtccggt tatccgcagc ctgccgcttg
      661 tcccgagggt caggtccgac gcatcggtca cccgtgcgcc cccctcggaa agatcgctga
      721 cctgggctgg catcgcactt cggccaggaa cctcaatctg gcaggccaaa gcgacatcca
      781 cccgttgcag ccgccgccga tccacctcgg aggtcgaggt acgcacggtg cggatcagcg
      841 tccgccgtag ctcgccgatc gcttcgttca gaacctgcgt cccgcccagt acggtatctg
      901 cgtactgtcc cgccacgccg gcctcgcgtg agacctcggt attgcgcgcg ctcatcgaat
      961 tgaccgcggt cgcggtctcg gtgacgccac gggcaatctc ggcggtggcc gcgccctgct
     1021 cttcgaccgc agcggcgatc gaattcgcga tcgtattgac ctcaccgatt gtcgtggtga
     1081 tccgcgatac cgccgtcacc gcgtctgcgg tggccgagcg gacatcggcg atatggcggt
     1141 tgatttcttc ggtcgagcgc gcagtctgat tggcgagttg cttcacttcg ctggccacca
     1201 ctgcgaagcc gcggcccgct tcaccggcac gagctgcctc gatggtcgcg ttcagcgcca
     1261 gcagattggt ctttgccgca atgtcgctga tgatttccgc aaccgcgcca atccgtccga
     1321 cgcgttcatt cagtgcttcg atggttccgc gcgtggcagt gccggcctcg accgcgagat
     1381 tgatggtcgc ggtcgaatga ttgacctgac cgctgatttc acggatcgag gtggccagtt
     1441 cttcggcagc gctggccacg gtctgcgcgt tggcgagtgc cagtccggca gcctgactgg
     1501 cgccctcggc ggactgcccg acgcgtgcgg ccagatcgcg catctccttc gcagtggtgg
     1561 tcatcgcgcc cgtgcgttcg ctgatcgcct cgacggcgtg tcccgagtcc gcctcgatct
     1621 tgtcggccat gccggacagc gcggcctgtt tggcgatctc ggcagcgtcc cgggccgccg
     1681 cctgctcctt gcgcaggtcc acagcctcct cctgggcttg tttaaagacc tgtaccgctg
     1741 ccgccatgcc gccaacctcg tcgcccctgc cggcaccggg gatgagagtg gccagatcgc
     1801 ctttcgccaa acggtccatc gcagattgca ggccgcccag tgaaagggtg atgtcgcggt
     1861 tgatcaacca ggcgacaacg agtgtcacca gcagaaccgg accggcgatc gctgcaagac
     1921 gctcggcgaa ggcattgaaa ctggcgtcca ggtcgccggt gtatgcgcca atggtgaaca
     1981 ccgcgtccca cggcgcgaac cgggcgacat aggcgatctt cggctgcacc tgggtctcgc
     2041 ccggcttcgc gaacatatag gacacgaagc ctttgtcggt gttgcgcaac acctccttga
     2101 tcaggtcgat caaaggcgcg ccactggcaa ccttcgccga actccgcttg ccgttgaggc
     2161 ggggatcggc gccatgcgcg atgatcatac tgtcattgag cgtctgcgcg acgata
//
LOCUS       DATAVD010001638         1537 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2016559, whole genome shotgun sequence.
ACCESSION   DATAVD010001638 DATAVD010000000
VERSION     DATAVD010001638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2016559"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1475)
                     /locus_tag="VHX39_31540"
     CDS             complement(<1..1475)
                     /locus_tag="VHX39_31540"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3995725.1"
                     /translation="MTVRLGVNDNLVILKKPFDNIEVLQLAHALTKKWHVTEQAHVRV
                     ETLDKMVAERTRALEASNAELRRSEERFAKAFRASPVPFVIQTPRENRFVDVNDSFLE
                     MTGYDREEVIGRTPLELHFCLDYATGPADAEKPVRHVEAQVSTKGGELRNALLSIERI
                     IVDGEPHVLLMVLDISDRLNLEAQLRQAQKMEAIGQLAAGVAHDFNNLLTIIQGHASL
                     QLTLAGHDEDAIDSLQQIAMASERAADLTRQLLAFSRRQVMRPRVLQLNQLIRDLTSM
                     LRRLIGEQVELRCELAEDVPPIWADQTGLEQVIMNLTLNARDAMPKGGCITISTLGTA
                     LTVADAEKNPESRAGRYATLTVTDTGTGMDASIRNRIFEPFFTTKETHKGTGMGLATV
                     YGITKQHDGWIEVSSEVGKGSQFRVFFPHTDRIAEPLEVAVQAVAPPGTESTILIVED
                     DEAVRSLVREVLDHNGYRVFEAEHGEAALEIWKEHRSEIDLL"
BASE COUNT          259 a          463 c          498 g          317 t
ORIGIN      
        1 agcagatcga tttcgctccg gtgctctttc cagatttcca gggccgcttc gccatgctcc
       61 gcctcgaaga cccgatagcc gttgtggtcc agcacctcgc gcaccaggct gcgcaccgcc
      121 tcatcgtctt cgacgatcaa aatagtggac tcggttcccg gaggggcgac ggcttgcacg
      181 gcgacttcca ggggttcggc gatccggtcg gtgtgcggga agaaaacacg gaattgcgac
      241 cctttgccga cttcgctcga cacctcgatc cagccgtcgt gctgtttggt gatgccgtag
      301 accgtggcca gccccatgcc cgtgcctttg tgcgtctctt tggtcgtgaa aaaaggctcg
      361 aagatgcggt tgcgaattga agcgtccatc ccggtgccgg tgtcggtcac ggtcagcgtg
      421 gcgtaccggc cggcgcgcga ttccggattc ttctccgcgt cggcgacggt gagtgccgtt
      481 cccaatgtgg aaatggtgat gcagccgccc ttcggcatgg cgtcgcgcgc attgagagtc
      541 aggttcatga tgacctgctc gaggccggtt tgatcggccc agatcggcgg gacatcctcg
      601 gccagttcgc agcgcagttc gacttgttcg ccgatcaagc gccggagcat cgacgtgagg
      661 tcgcggatca attggttgag ttgcaagacg cgcgggcgca tgacctgccg gcggctgaag
      721 gcgagcaatt gccgcgtgag gtcagccgcg cgctcggagg ccatggcaat ctgctgcagc
      781 gaatcgatgg cgtcctcatc gtgcccggcc agggtcaact ggaggctggc gtggccctgg
      841 atgatggtca gcaggttgtt gaagtcatgc gcgacgccgg ccgccaactg gccgatcgct
      901 tccatcttct gcgcctggcg caactgcgcc tcgaggttca gccggtcgga aatatcgagc
      961 accatgagga gcacatgggg ctctccatcg acgatgatgc gctcgatgga aagcagggcg
     1021 ttgcgcaatt cgccgccctt ggtgctgacc tgcgcctcga catggcgcac gggcttttcc
     1081 gcgtcggccg ggccggtggc gtagtcgagg cagaaatgca attccagcgg ggtccggccg
     1141 atcacttcct cgcgatcgta accggtcatc tccaggaacg agtcgttcac atcgacaaaa
     1201 cggttctcgc gcggtgtttg gatgacgaac gggacggggc tggcccggaa ggccttggcg
     1261 aagcgctctt cggaacggcg cagctccgcg ttgctggctt ccagcgcgcg ggtgcgttcc
     1321 gccaccattt tatccagcgt ctccacccgg acgtgcgcct gctcggtgac atgccatttc
     1381 ttggtcaagg cgtgcgcgag ttgcagcacc tcgatattgt cgaacggctt tttgaggatg
     1441 acgagattgt cgttcacgcc gaggcggacg gtcatctttt cccacgaata atccgaatac
     1501 gccgtgcaga ccacgacctg gagcgaggga tcgactt
//
LOCUS       DATAVD010001639         1788 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3694857, whole genome shotgun sequence.
ACCESSION   DATAVD010001639 DATAVD010000000
VERSION     DATAVD010001639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3694857"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..731)
                     /locus_tag="VHX39_31545"
     CDS             complement(<1..731)
                     /locus_tag="VHX39_31545"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEX3995726.1"
                     /translation="MPLTADRLDRIQPSLTIAISTVARKMIADGKNVISLSQGEPDFD
                     TPRNIKDAAIRAIEAGETKYTDVSGTPALRRAAAAKFKRDSGIEFKTEEIIVSTGAKQ
                     VLFNAMLGTLNAGDEVIIPSPCWVTYPDIVTLSDGKPVLVPCPQNNGFKLRAEDLEAA
                     ITPKTRWFMLNNPCNPTGAAYSAEELRPICDVLLRHPHVWVLTDDIYDGLVYDGFKAG
                     TIVAVEPKLRDRTLTVHGVSKSYAMT"
     gene            1258..>1788
                     /locus_tag="VHX39_31550"
     CDS             1258..>1788
                     /locus_tag="VHX39_31550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995727.1"
                     /translation="MSEATPVVPYRGLITGFATLAMLMQTLDSTIANVALPFMQGSMS
                     ASADEITWVLTSYVIAAAIMTAPVGWMARRFGRKKLFMGSLAGFTLASMACGAAQTLD
                     QLVLFRLLQGMCGAAIAPLSQATMLDIYPFSKRAQAMAIFSMGVTMGPIMGPTLGGYL
                     TDAFSWRYVFYVNLPLG"
BASE COUNT          301 a          526 c          587 g          374 t
ORIGIN      
        1 gtcatggcat atgatttgga tacgccgtgc accgtcaggg tacggtcgcg cagcttcggc
       61 tcgaccgcga cgatcgtgcc ggccttgaaa ccatcataga cgaggccgtc gtagatatcg
      121 tcggtcagca cccagacatg cggatggcgc agcaacacgt cgcagatcgg ccgcagttcc
      181 tcggcactgt aggcggcgcc ggtcggattg cacggattgt tcagcatgaa ccagcgggtt
      241 ttcggcgtga tggccgcttc caggtcctcg gcgcgcagct tgaagccgtt gttctgtggg
      301 cacggcacca acaccggctt gccgtcggac aaagtaacga tatccggata ggtcacccag
      361 cacgggctcg ggatgatcac ctcatcgccg gcgttcaggg tgcccagcat ggcgttgaac
      421 aagacctgct tggcgccggt ggagacgatg atctcctcgg ttttgaattc tatgccggag
      481 tcgcgtttga acttggccgc cgccgcacgg cgcagcgcgg gcgtgccgga gacgtcggtg
      541 tatttcgtct cgccggcctc gatggcgcgg atcgccgcgt ctttgatgtt gcgcggcgtg
      601 tcgaaatcgg gctcgccctg cgacaggctg atcacgtttt tcccgtccgc gatcattttc
      661 cgcgcgaccg tcgagatggc gatggtcagg ctgggttgaa tgcggtcgag gcggtcagcg
      721 gtcagtggca tggtgggttc ccggttggaa ggcgcgggac actagtgaac tgggacccgg
      781 cgggcaaccg tggtgggctc aggtctggtg tgaggctgga tctgggcttt cagccgcgtc
      841 aaggctttgt tcacacctca gccccaaaat ggaaaagccg acggggaacg gccccgccgg
      901 ctaaccagaa ggaggagcga gatgctcacc atctcaatct tcctaccgct agtagtcgtg
      961 atccttgagg taaaagtcaa gatcacccgg aagcttatca tccggaaggc gcggtaggga
     1021 aggggccggt tcgttcgcgg accggtcctc ccctggtgac ataatctgac cggctgcaag
     1081 cccgacctgg cgttccggga cgaaggcggg cacagtgtcg ccaaccaacg atacgtccag
     1141 gaagcatgcg actccctttg actacgcccg tactccgacc gatcccggcc cggctggcat
     1201 ttttgcgtat gccggttcgg gtcattcgcc cgtcgcggcc cccccgcgtt tcccacgatg
     1261 tctgaggcga ccccggttgt tccgtatcgc gggctgatca ctgggtttgc caccctggcg
     1321 atgctgatgc agacgctcga ctcgacgatc gccaatgttg cgctgccgtt catgcaaggc
     1381 agcatgtcgg cctcagccga tgagatcacc tgggttttga cctcctacgt cattgccgct
     1441 gcgatcatga cggctccggt cggctggatg gcgcggcggt tcgggcggaa gaagctgttc
     1501 atgggcagcc tcgccgggtt cacactggcc tcgatggcct gtggtgcggc gcagacgctg
     1561 gaccaactgg tgctgttccg gttgctgcaa ggcatgtgcg gggcagcgat cgcgccgctg
     1621 tctcaggcca ccatgctgga catctatccg ttttcaaaac gagcccaggc gatggcgatt
     1681 ttctcgatgg gggtgacaat ggggccgatc atgggcccga cgcttggcgg ctatctgacg
     1741 gatgcgttta gttggcgcta tgtgttttac gtcaatctgc cactgggg
//
LOCUS       DATAVD010001640         3171 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_902382, whole genome shotgun sequence.
ACCESSION   DATAVD010001640 DATAVD010000000
VERSION     DATAVD010001640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3171
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_902382"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            250..326
                     /locus_tag="VHX39_31555"
     tRNA            250..326
                     /locus_tag="VHX39_31555"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:284..286,aa:Arg,seq:acg)
     gene            456..1352
                     /locus_tag="VHX39_31560"
     CDS             456..1352
                     /locus_tag="VHX39_31560"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEX3995728.1"
                     /translation="MSRRALVLGGGGAAGNAWLLGVVAGLFDAGWDVTEADLIIGTSA
                     GSTAAAQITSATPTQLLAGILSTAPAQRPGPISANGGRVPVGAAANHMEITQGIIGAA
                     RDAADMRRRLGAAALEMDTAVDGSRQAQWRATVAARLPSQHWPQRTLLITAVDARTGE
                     PVVFDRHSGVDLADAIAASTANGFGVPPYSIGSNRYIDGGYRRNENADLAGGCERVLV
                     LSPLGGRSRHPVNWRTHLAAQADELRAGGSTVETILPDIDSQGALGTGVTMMDLSRRR
                     PSAEAGYQQGRALAGPLTEFWR"
     gene            1623..>3171
                     /locus_tag="VHX39_31565"
     CDS             1623..>3171
                     /locus_tag="VHX39_31565"
                     /inference="COORDINATES: protein motif:HMM:NF017775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEX3995729.1"
                     /translation="MKDRRKRGSRAAESDKRSKLLPQLDSMWHALIQSSVRDSLLLIA
                     TVLVAVVVVTAFTQIRLNAWNQPFYDALSHHNLDGFLHQLGVFGIIACILVVLNVAQK
                     FLTETLKLKLREGLVKDLIEHWLRPMRVFRLANAGDIGVNPDQRVHEDARHLTELTAD
                     LGTGLLQAAILVVMFVGVLWRVSTGFLFHVHDHAYSIPGYMVWAAIVYAGSASLVSYA
                     AGRSLIKRNADRYQRESELRFGLVRVNEYADAIALAGGEADEVLHVERDLSSVLAATW
                     RLVFGLTNLTWITAGYGSFTLVAPIIAAAPLYFFGNLSFGGLMMAAGAFTQVQGSLRW
                     FVDNFSTIADWRATLLRVANFRSAVTDLDSLHRVETQIAYEVGAPDELRIEKLEITSP
                     TGATKIRESKVVIKPGERVLIMGEPGAGKTLLFHALAGLWPWGSGSVTRPKGQSIYYM
                     PRTAYWPPGSLREALAYPSEPADIKDEVFKDALQDLKLQEFAPNLDKDRNWQEELSAD
                     QLTRLEFV"
BASE COUNT          576 a         1010 c          995 g          590 t
ORIGIN      
        1 aggaggcttc tacagcctgc cggccaattg cggccggcca ccggcgaaac cacgcctgcc
       61 gccggcgttg ctgactgatg gggcagttgt gttaggatcg cgcccccgca gcggcaggtg
      121 ccgcgggctc aaggtgagcg cggccggccc cggcagcagg tccagccacg ctccgaccct
      181 tatgtaatgt attgattgca ttgggaactt gacgctcggg ccggacacgg ccgcggtgac
      241 ccgcaatacg cgcccgtagc tcagttggat agagcgcatg gctacgaacc atgaggccgg
      301 gagttcgaat ctctccgggc gcgccagtta cgacccggga cttacgcaag cccggttcat
      361 cgttgtcggc agcctttgac agattccgtg ccgcatacgg ggctaaccgc gtcgttttgc
      421 gaagcccagt catgccggtt tgggggtgct tgaccatgag caggcgcgcg ttggtcctcg
      481 gcggtggcgg agcggcaggc aatgcctggt tgctaggcgt cgtcgcgggc ctgttcgatg
      541 ccggatggga tgtgaccgag gccgatctga tcatcgggac ctcggccgga tcgaccgctg
      601 cggcccagat aaccagcgcg accccgaccc aactgcttgc cggcattctc tccaccgcgc
      661 ccgcgcaacg gccagggccg atcagcgcca acggcgggcg cgttcccgtt ggggccgcgg
      721 ccaaccatat ggagattacc caggggatca tcggcgccgc tcgggatgcg gccgatatgc
      781 gtcgccgatt gggtgcggca gcgctcgaaa tggatacggc agtggacggg tcccggcaag
      841 cgcagtggcg cgctaccgtc gctgctcgac taccgagcca gcattggccg cagcgaacgt
      901 tgctgatcac ggcggtcgat gcccgcaccg gcgaaccggt cgtcttcgac cgccatagcg
      961 gagtcgacct ggcggatgcc atcgccgcca gcactgccaa cggcttcggc gtcccgccct
     1021 atagcatcgg cagcaatcga tacatcgacg gcggctaccg acgcaacgag aacgccgatc
     1081 tggcaggcgg atgcgagcgg gtcctggtgc tttctccact cggcggcaga tcgcggcacc
     1141 cggtcaactg gcgcacccac ctcgcagcac aggccgatga acttcgcgca ggcggaagca
     1201 cggtggagac catcctgccg gatatcgact ctcagggtgc gctcggcacc ggcgtcacga
     1261 tgatggatct gtcgcggcgc cggcccagcg cggaagcggg ctaccagcaa ggccgagccc
     1321 tggccggacc gctcaccgaa ttctggcgct gacacgagtc gtcctcacag gcgtgcccca
     1381 ccgcctaacg gcgcgcgtct gccgtcgcgg taggtaggtc gaaatctcct ctccaaagac
     1441 gaccaggttg gcataccacg catcgccggc gacttacagc ccggcaaatt cattaaccgc
     1501 tgtaagcgcc cgcctgcctg ccggcaggag attgccgcat gttcgcccgg gagctcacaa
     1561 ggtcggaacc ggggccgggt tgctctggca aactcaagtg atctcaggcg cggaagcaag
     1621 tcatgaaaga ccgccggaaa cgtggctcga gagccgccga aagcgataag cgttcaaagc
     1681 ttctgccaca acttgacagc atgtggcacg cgctgattca gtcatcagtg cgcgactcgc
     1741 tgctgctcat agccaccgtc ctggtcgccg tcgttgtcgt cacggccttt acgcaaatca
     1801 ggctcaatgc ctggaatcag ccgttctacg atgctctgtc gcatcacaat ctggatggat
     1861 tcctgcatca gcttggcgtg ttcgggatca tcgcctgcat attggtggtg ctgaacgttg
     1921 cgcagaaatt cctgaccgaa actctaaaac tcaagcttcg ggaaggactg gtcaaggatc
     1981 tgatcgaaca ctggctgcgc ccgatgcgcg tgttccggct cgccaacgca ggcgacatcg
     2041 gcgtcaatcc ggaccagcgc gtacacgagg atgcccgtca cctgacggag ctcaccgctg
     2101 atctgggcac gggcctgctg caggcggcca tcctggtggt gatgtttgta ggtgtgctgt
     2161 ggcgggtctc gaccggtttt ctttttcatg ttcacgatca cgcctattcc attcccggtt
     2221 acatggtgtg ggccgcgatc gtgtatgccg gctccgcgtc gcttgtgagc tacgccgccg
     2281 gacgcagcct gatcaagcgc aacgccgacc gttaccagcg ggagtccgaa ctgcggttcg
     2341 ggctcgtgcg agtcaatgaa tacgccgatg ccattgcatt ggccggcggc gaagccgatg
     2401 aggtgcttca cgtggagcga gacctctcct cggtactggc cgccacctgg cgactggtgt
     2461 tcggattgac caatctgacc tggatcaccg ccggctatgg gtcgttcacg cttgtcgctc
     2521 cgatcatcgc ggccgcgccc ctctatttct tcggcaatct ctctttcggc ggactcatga
     2581 tggccgccgg tgccttcact caagtgcagg gctccttgcg ttggttcgtc gacaatttca
     2641 gcaccatcgc cgattggcgc gccacgttgc tgcgcgtcgc caacttccgc agcgccgtga
     2701 cggacctgga ctccctgcat cgggtcgaga ctcagatcgc ctacgaggtt ggcgcacccg
     2761 atgaactccg gatcgaaaag ctcgaaatca cctcacccac gggtgccacc aagatcaggg
     2821 aaagcaaggt tgtcattaag cccggcgaac gcgtgctcat catgggtgag ccgggcgccg
     2881 gcaaaacgct gttatttcac gctttggcgg gcctgtggcc gtggggctcc gggtcggtaa
     2941 cacggcccaa gggtcagagc atttattaca tgccgaggac cgcttactgg cctcccggct
     3001 cgctgcgcga ggccctcgca tacccgtccg aacctgccga tatcaaggac gaagtcttca
     3061 aggatgcgtt gcaggacctc aagctgcagg aatttgcacc gaacctggac aaggatcgga
     3121 actggcagga agaactcagt gcggaccagc tgacgcgatt ggaattcgta c
//
LOCUS       DATAVD010001641         2072 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2578895, whole genome shotgun sequence.
ACCESSION   DATAVD010001641 DATAVD010000000
VERSION     DATAVD010001641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2578895"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(291..1319)
                     /locus_tag="VHX39_31570"
     CDS             complement(291..1319)
                     /locus_tag="VHX39_31570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3995730.1"
                     /translation="MSGTRLPFPHPRVRPAWLAGLREDIIDPGQTIIDPHHHLWHARP
                     DRYLLDDLAEDVGTGHDVRATVFIQCGSAYRKDGPDELRPVGETEFVSTVATASESRN
                     FQACAGIVGHADCRLGDRIEPVLLAHVAAGGGRFKGIRHSATYDAGIAPTAPPGAPPG
                     LFLDPAFRAGVARTGAVGLTFEAWCYHPQLPEFSELLRACPDQKIVLNHLGGPLGVGP
                     YEGLRDEVFTNWSASIKELAQCPNLFIKLGGLGMNVNGFGYHHQPLPPGSGEMATAWR
                     PYMETAIEAFGAARCMFESNFPVDKGMCAYPVLWNAFKRIAAGCSADEKAELFHGTAA
                     RFYSLPPV"
     gene            complement(1353..>2072)
                     /locus_tag="VHX39_31575"
     CDS             complement(1353..>2072)
                     /locus_tag="VHX39_31575"
                     /inference="COORDINATES: protein motif:HMM:NF025072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX3995731.1"
                     /translation="EEAAVVSAVVPAATVCAVTPYAFPAVESPDTTQTAAEPPWILFV
                     AGFAHPPNGIAATWFVQEVLPAILARVPAARVAIVGSNPPESVRHLCSTHVSLFADVT
                     DAALLAWYRRATVAVVPLLTGAGVKLKTVEALWHGVPAVLTPAGAQGLPGIERVVAVA
                     TEPAALAAAVVDLLTDSALRQQRREAQMDYARGRFSAAAQTQSLLSALALIGLRPDRR
                     SLPADRVEQAAEGCVSHLAMA"
BASE COUNT          402 a          683 c          642 g          345 t
ORIGIN      
        1 aacgtcgccg agacctggcc aaacccggtg aagtgatgct cgacaatgaa cgcgctttcg
       61 aagccaagcg actcagcctc aatcacgtag tcgatgtagt ctttgaagcc ggctgcactg
      121 tccacgtccg ggttgtcgga gcgttgcgcc gtggcggcgc cgaataggcc aaatttcatc
      181 acagaatccc ggttcgatcg gttgacggca agcggcctgc aagctcgatc aaacaggcct
      241 tcagcatctt cctatcacag tccacgtgcc ccggccacaa cgcgcgcctg tcacaccggc
      301 ggcaaactgt agaaccgcgc ggccgtgcca tggaacaatt ccgccttttc atccgcggag
      361 cagccggccg cgatgcgctt gaacgcattc cacagaacag ggtaggcgca catccccttg
      421 tcgaccggga agttgctttc gaacatgcac cgtgccgcac cgaaagcctc gatcgcggtc
      481 tccatataag gacgccacgc cgttgccatc tcgcccgagc ctggcggcaa cggctggtga
      541 tgatagccaa atccgttcac gttcatgccc aggccgccca gtttgatgaa gagattgggg
      601 cattgggcga gttccttgat gctggccgac caattcgtaa aaacctcgtc ccgcaggccc
      661 tcgtatggcc cgacaccaag cgggccgccg aggtgattga gcacgatctt ctgatccgga
      721 caggcacgca gtaattcgga aaattccggc agttgcggat gataacacca ggcctcgaag
      781 gtcagcccga ctgcgccggt ccgtgccacc ccggcacgga atgccggatc gaggaacaaa
      841 cccgggggag caccgggcgg cgccgtgggc gcaatgccgg cgtcataggt ggcactatga
      901 cggatccctt taaagcggcc gccgccagca gcgacatggg ccagcagaac cggttcgatg
      961 cggtccccca accggcaatc ggcatgcccg acaatcccgg cgcaggcctg aaagtttcgc
     1021 gattcgctcg ccgtggcgac ggttgagaca aattcggtct cgcccaccgg ccgcagttca
     1081 tccgggccat ccttgcgata ggcggacccg cattggatga acaccgtggc gcgtacgtcg
     1141 tgaccggttc ccacatcctc cgccaggtcg tcgagcaaat accggtcggg acgtgcgtgc
     1201 cacaaatgat ggtgtggatc gatgatcgtc tgtcccgggt cgatgatgtc ctcgcgcaga
     1261 ccggcaagcc acgcgggccg cacacgagga tgcggaaacg gaagtctggt gccgctcatg
     1321 gacgtggtcc tcccccgggg atcgtccggc gatcaggcca tggcgaggtg cgacacgcaa
     1381 ccctctgcgg cctgctcgac ccggtccgcc ggcagtgatc gccggtctgg ccgcaacccg
     1441 atcaatgcca gcgcactcaa taacgattgt gtctgtgctg cggcgctgaa gcgccctcgc
     1501 gcgtagtcca tctgtgcctc gcggcgttgc tgacgcagtg cgctgtcggt cagcaggtcg
     1561 accacggcag cggccaacgc ggctggttct gttgccaccg caacgacccg ttcgatgcca
     1621 ggcaaccctt gtgccccggc cggagtcagc acggccggca cgccatgcca cagggcctcg
     1681 acggtcttta gcttgacccc ggcaccggtc agcagcggga cgacagcgac cgtagcccgc
     1741 cgataccagg caagcagtgc ggcgtcggtc acgtcggcga acaaactgac gtgagtgctg
     1801 cacaaatgcc gcacggattc cggtgggttg gagccgacga tcgccactcg cgctgccggc
     1861 acacgggcca ggatcgccgg taggacttct tgcacgaacc aggtcgcggc gatgccattg
     1921 ggtggatgag caaagcccgc aacgaagagg atccacggcg gctccgcggc agtttgcgtt
     1981 gtgtcaggcg actcgactgc agggaacgca taaggcgtca ccgcgcacac ggtggcggcg
     2041 ggcaccaccg cgcttaccac cgcagcctct tc
//
LOCUS       DATAVD010001642         2437 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1455918, whole genome shotgun sequence.
ACCESSION   DATAVD010001642 DATAVD010000000
VERSION     DATAVD010001642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2437
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1455918"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(203..1168)
                     /locus_tag="VHX39_31580"
     CDS             complement(203..1168)
                     /locus_tag="VHX39_31580"
                     /inference="COORDINATES: protein motif:HMM:NF040195.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995732.1"
                     /translation="MRVVIPDQLAGIVTPVHPLAEEADQHAIGWAHQHGLASTPAGLS
                     GLAAIKPGTLAAHCYPAAVQNDLFLLADWLTWLFSFAEQNDSGEYGRNPNFLELVLTD
                     VYFAAVEPDGPIAENPLGTALKNIFARIGGRMPVEWRRRFLCHVIDYFAANIWQAAHR
                     RTGDIPDLDTFASMRRDVGGIIPSFDLIELVASTTIPAELYCSRVYQRLIVSAANVVC
                     WTNDLMTAQKDLANGRITNFVPVLMHHLAAPVQDSIDDVTHRVGRQVELFIAAERELV
                     RVFDVHGVSDERRTATLDCVAMLRAWMGGHVEWGRNAARHLQTTP"
     gene            1584..2228
                     /locus_tag="VHX39_31585"
     CDS             1584..2228
                     /locus_tag="VHX39_31585"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX3995733.1"
                     /translation="MDSTSEVMGTDEDGRLIAWYGRLSDAVRDLIDAAIRTQAEEDTI
                     RDAHTAIEAVTGTLRASQSDRRPEVHYVAGAGFRVNGRPLVWNNAVIGLRNPIAPPLT
                     IQRDGHRCWSKFHLGAAYEGPPGLVHGGVCALVLDHMLGDAASEGLTKPLFTGTIIVK
                     YLRGTPLGMLRADAAIGRTEGAKTFVRGSLSDASGTTAKAEGVFIRPRWARNVR"
BASE COUNT          492 a          781 c          718 g          446 t
ORIGIN      
        1 cttgggatac ccagcgagat cgcagccgcg gtttgatcca agcgttttgc tgtgcaccat
       61 ctcgggtccc tgcccaatgc gcttgctagc tatgccatca acgacgtcgt gccgcggcca
      121 gcccgccgcg ccgatgccaa ggcagcgggc cgtcgaagtg catagccgcc gcgagaggag
      181 ggcggcccgg gcgccacccc tcttacggcg ttgtctgcaa atgccttgcc gcgtttcggc
      241 cccattcgac gtgtccaccc atccacgccc gcagcattgc gacacagtca agagtcgcgg
      301 tccgcctctc atcagacacc ccatgcacat caaacacccg aactaattcg cgttcggcgg
      361 caatgaagag ctcgacctgc ctaccgactc gatgcgtcac gtcgtcgatg gagtcctgca
      421 ccggcgctgc cagatggtgc ataagcaccg gcacgaaatt cgtgatgcgg ccgttggcca
      481 ggtccttttg tgctgtcatg aggtcattcg tccagcacac gacgttggct gcgctcacta
      541 tcagacgttg atagactcgg ctgcaatata attcggccgg tatcgtcgtc gatgcgacca
      601 gttcgatcag atcgaacgac gggatgatcc cacccacatc ccggcgcatg ctggcgaacg
      661 tatcgaggtc gggtatgtcg ccggtacggc ggtgtgccgc ttgccagatg ttcgcggcga
      721 agtagtcgat cacgtggcac aggaaccgcc gacgccactc gactggcatc cggccaccga
      781 tgcgggcaaa gatgtttttc agggcagtgc ccaacggatt ctccgcaata ggcccgtcgg
      841 gctcaacggc ggcgaagtaa acgtcggtca ataccagttc caggaagttc gggttgcgac
      901 cgtattcgcc gctgtcgttc tgctcggcga agctgaacag ccaagtcagc cagtccgcca
      961 acagaaataa atcattctgg acggcagccg gataacagtg cgcagccagc gtcccgggtt
     1021 tgatcgccgc gagtcccgac agtccagctg gcgtgcttgc caatccgtgt tgatgggccc
     1081 agccaatcgc atgctggtca gcctcctcgg ccaatgggtg cactggggta acgatcccgg
     1141 cgagctggtc aggtatgaca accctcatgc tcgcgaccga gtctgtgccc acaccgctat
     1201 ttcggcctgc catggacccc aacctttctg accatttagc atccctgctt gtcgtgacta
     1261 ctacatatcg tctccggagg ggagacacgc ggtatcgctc accgctgaag cggaatgtga
     1321 aagcccagta gtcgcatacg gcccatgccc agggtgagca gttgccgcag cgcttcgcgg
     1381 aaccagctga gtctgaacga caggaatgat acgacccgtc tctcatgtta gcgatacact
     1441 acgtatcatg caccatcaga tgcttggccg ccgcgagttg acgaccacgg cgcggcgacg
     1501 gcatggcaga acggcgacac aggcgctccg ggccgctcgg cacgcaaaga cctggtgcac
     1561 atggtctgcg ggagtagggc tgggtggaca gcacgtctga ggtcatgggc accgacgagg
     1621 atggccgact gatcgcgtgg tacggccgat tgtctgatgc cgttcgcgac ctcattgatg
     1681 ccgccatccg gactcaggcc gaggaggaca ccatccgtga cgcgcacacc gccatcgaag
     1741 ctgtgaccgg aacactgcgc gccagtcaat cggaccgacg gccggaggtg cactacgtcg
     1801 ctggcgccgg attcagagta aacggccgcc cgcttgtgtg gaataacgcg gtgatcggtt
     1861 tgcgcaatcc catcgctccc ccactgacca tccaacgcga tggccacaga tgctggagca
     1921 agttccacct cggcgccgcg tacgaaggcc cgccaggtct ggtgcacggc ggtgtttgcg
     1981 ccctggtcct cgaccacatg cttggtgatg cggccagcga gggactgacc aagcccctgt
     2041 tcaccggaac cataatcgtg aaatacctac gcggcactcc gttgggcatg ctgcgcgccg
     2101 acgccgctat cggccgcact gagggtgcca aaacgtttgt gcgcggcagc ctttcggacg
     2161 catcgggaac cactgcaaag gcggaagggg ttttcatccg gccccgatgg gcccggaacg
     2221 tccgatgaag tacagatcac agaagaacat ccccgaacac cacgggatct ggagaccggg
     2281 agcccggcga tatcctcgat taccagggct tcgggactcc aattcatttc gccagttgga
     2341 gagccttgcc gctccgtgcc gctaactccc ttgaaccagc acacctacca gttggcctgg
     2401 atcaaaccag ccaaacaacg tcctcaagaa ggcgacc
//
LOCUS       DATAVD010001643         1785 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_160128, whole genome shotgun sequence.
ACCESSION   DATAVD010001643 DATAVD010000000
VERSION     DATAVD010001643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1785
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160128"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..700
                     /locus_tag="VHX39_31590"
     CDS             <1..700
                     /locus_tag="VHX39_31590"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEX3995734.1"
                     /translation="WDLDAVSPTVLVNAKDKDGNIVPAVMQAGKTGHVYVNNRKDCSL
                     IRSSEAMVPQENMWALPTSGGTRMLPGANGGVEWSPMATNPFLSLAYAINLHQPMTYT
                     VTSAPYPNGKLWLGGAFAVIPTEEQWGNITAVDYNTGKIRWQVKTAEPMIGGILATAG
                     GLVFTGEGNGRFAAYDSATGSRLWQFQAGAGVNAPPSSYTVDGKQYIAVAAGGNVQLN
                     YKRGNAIIAFTLSE"
     gene            788..1360
                     /locus_tag="VHX39_31595"
     CDS             788..1360
                     /locus_tag="VHX39_31595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995735.1"
                     /translation="MNRIFLALSITLLSAAAPAWAQQQTIAEKAQVCATCHGEKGIPV
                     DKAYPIIWGQHQGYVYLQLRDFKSAARKNEFMEAVVADLTRDDMMALAEYFSKKPWPD
                     LRQKTASDADAAVANRVNVSIGCTGCHLGQYQGDATVPRLAGQAHDYLLKEMKDFRAR
                     TRGNNPGMTDLMKATPEADFAPEANYLAGH"
     gene            1416..>1785
                     /locus_tag="VHX39_31600"
     CDS             1416..>1785
                     /locus_tag="VHX39_31600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase-related protein"
                     /protein_id="HEX3995736.1"
                     /translation="MQTNDIRAAFLEYFARHGHEIVPSSPLVPRNDPTLLFTNAGMVQ
                     FKNVFTGAEKRPYARATSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFK
                     PEAIEFAWNLITKDFALDASR"
BASE COUNT          356 a          550 c          550 g          329 t
ORIGIN      
        1 gtgggatttg gacgcggtca gtccgacggt gctagtcaat gccaaggata aggatggcaa
       61 catcgttccg gcggtgatgc aagccggcaa gaccggccat gtctatgtca acaaccggaa
      121 ggattgcagc ctcatccgtt cctcggaagc gatggtgccg caagagaata tgtgggccct
      181 gccgacctcc ggtggcaccc gtatgctgcc gggcgccaat ggcggcgtcg aatggtcgcc
      241 gatggcaacc aacccgttcc tgagcctcgc ctatgccatc aacctgcatc agccgatgac
      301 ctacaccgtg accagcgcgc catatcccaa tggcaagctg tggctcggcg gcgccttcgc
      361 cgtgattccg acggaggagc agtggggcaa cattaccgcg gtcgattaca acaccggcaa
      421 gatccgctgg caggtcaaga ccgcggaacc gatgatcggc ggcattctcg ccacggccgg
      481 cggattggtc tttaccggag agggcaatgg ccggttcgcg gcttatgatt cggcgaccgg
      541 ttcccggctt tggcagttcc aggccggcgc cggcgtcaac gcgccgccct cgtcctatac
      601 ggtcgacggc aagcaatata tcgcggtggc ggccggtggc aacgtgcagc tcaactacaa
      661 gcgcggcaac gccatcatcg ccttcacgct gagcgagtaa ccctgtgagc ggtgcggtgc
      721 gccgctggtg aaaagacgga cgggaccgct tgcggtcccg ttctttttcg ggcaaccgag
      781 gccggtcatg aaccgaattt ttctcgcgct ttccattacc ttgctgtcgg cggcggcacc
      841 agcttgggcg caacagcaaa ccatcgcgga gaaggcccag gtctgcgcca cctgccatgg
      901 cgagaagggc atcccggtcg ataaggcgta tccgatcatc tggggccaac atcagggcta
      961 tgtctatttg cagttgcgcg atttcaaatc ggccgcccgg aagaacgaat tcatggaagc
     1021 ggtcgtggcg gatttgaccc gcgacgacat gatggcgctg gcggagtatt tctcgaaaaa
     1081 gccctggccc gatctgcgcc agaagaccgc ctccgatgcc gacgccgcag tggcgaaccg
     1141 ggtcaacgtg tccatcggct gcacgggatg ccatctcggc cagtatcagg gcgacgccac
     1201 cgtgccgcgc ctcgcgggac aggcacatga ttacctgctg aaggaaatga aggattttcg
     1261 cgctcggacg cggggcaata atcccggcat gaccgatctg atgaaagcga cgcccgaggc
     1321 cgatttcgcg cccgaagcga attacctcgc cggccattag cggcgcgcca cgcgccaact
     1381 ttacagactc cgagcgctcg ggctaaatgc cggtcatgca aaccaacgat attcgcgccg
     1441 ctttcctcga atatttcgcg cgccatgggc acgaaatcgt gccgtcgtcg ccgctggtgc
     1501 cgcgcaacga tccgacgctg ctgttcacca atgcggggat ggtgcagttc aagaacgtct
     1561 tcaccggcgc ggagaagcgg ccttatgcgc gcgccacctc gtcgcaaaaa tgcgttcggg
     1621 cgggcggcaa gcataatgac ctggagaatg ttggctatac cgcgcggcat cacacgtttt
     1681 tcgagatgct cggcaacttt tccttcggcg attacttcaa gccggaggcg atcgagtttg
     1741 cctggaacct gatcaccaag gatttcgcgc tcgacgccag ccggc
//
LOCUS       DATAVD010001644         2183 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1644991, whole genome shotgun sequence.
ACCESSION   DATAVD010001644 DATAVD010000000
VERSION     DATAVD010001644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1644991"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            117..569
                     /locus_tag="VHX39_31605"
     CDS             117..569
                     /locus_tag="VHX39_31605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995737.1"
                     /translation="MAADRRKTSQPLQLVLILTATLLAVVSGMAGIVHQAAGLGPRIG
                     DLVAFDPAHHAPFDSTVRLTANRLRQTSCVLDVATMQKSGGSLVLERRGSEPDRLYRA
                     HWSGLRTSDDAEDCGGQADLVLSRSDIDTLATAAGGFGVDHTSVLLIR"
     gene            698..1093
                     /locus_tag="VHX39_31610"
     CDS             698..1093
                     /locus_tag="VHX39_31610"
                     /inference="COORDINATES: protein motif:HMM:NF012272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005344 - oxygen carrier activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="globin"
                     /protein_id="HEX3995738.1"
                     /translation="MSDDAAVITETLDRVAERVGDPMPLIFERLFAELPEAEPLFVRD
                     KGGLVRGQMFQVTMESLLDFLGDRSYGANLIQIERVNHQGLGVEPEMFDRFYLTVMAT
                     FKDVLGSDWTEEMETVWSRVIGELTGLAG"
     gene            complement(1128..>2183)
                     /locus_tag="VHX39_31615"
     CDS             complement(1128..>2183)
                     /locus_tag="VHX39_31615"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3995739.1"
                     /translation="ESLLCDDLGINIVSIEHHAGINSLYGASPIVLGALARQTRRVRI
                     LSQGTLISIRTDPVRVAEEYATADVLLRGRLDIGFVKSGDSEMASGNANPVGNLERFW
                     EAIDLITKALQNQDGPFRWEGKHFAHRHINLWPRPYQQPHPPMWTATGDPDTSRELGR
                     RGMVNSVVLRGIDGTKRTWAAYREAREAAGLPPPALDRFAYCAFVYVGDTDEEGVSIG
                     TKLLWFLNTSLKQAPQFSTFLPGRMPPEMAPGIYRTKPRPGEAPVARPADALRTMTAE
                     QAIQRQIMFAGKPETVVKQIMAAYDTLGGFGHLIFIGRSGFLTHDEAEKSLKLLAKDV
                     LPRLREEAQTRGLAPVG"
BASE COUNT          406 a          684 c          662 g          431 t
ORIGIN      
        1 cccaaacttt ggcggcaccc tccccattcc ggtgccgccg attttttgcg gggacattaa
       61 ccctcgctta actttcagcc gcgtaagttg ccgggcctca ccccggagca gtcacgatgg
      121 ccgccgaccg ccgtaagacc agtcaaccgt tacaacttgt gctgatcctg accgcgacgt
      181 tgctggccgt ggtgtccggt atggccggga tcgtgcatca ggcagccggg cttgggccca
      241 ggatcggtga tctggtggca tttgacccgg cgcaccacgc cccgttcgac agcaccgtcc
      301 gcctgacggc caaccgcctg cggcaaacga gctgtgtgct ggacgtcgcc acaatgcaaa
      361 agtccggcgg cagcctggtc ctggaacgtc gcggcagcga gcctgaccgg ctctatcgtg
      421 cccattggtc cgggcttcgc accagtgacg atgccgagga ctgcggtggt caggccgatc
      481 tggtactgtc gcgcagcgac atcgatacgc tcgccaccgc agcaggcgga tttggcgttg
      541 atcacacctc ggttttgtta attcggtaac gtttgacttg cagccacgga tcgcatccgg
      601 gctgctcgca gttcccctcc gatagcacgc gccggcactt tcatgaacgc atcggatcgg
      661 ggaagctgcg ggcctcgcca acctgcccgg agcgaccatg agcgacgatg ctgccgtcat
      721 cactgaaacg ctggaccgtg tcgccgaacg cgtcggcgat cccatgccgc tgatcttcga
      781 gcgcctgttt gccgaactgc ccgaagccga gccgttgttt gtccgcgaca aaggtggtct
      841 cgtgcgcggt cagatgtttc aggtgacgat ggaaagtctc ctggattttc tgggtgaccg
      901 gtcatacggc gctaacctga tccagatcga gcgcgtcaat catcaaggac tgggcgtcga
      961 acccgagatg ttcgatcgct tctatctgac cgtgatggcg acgttcaagg acgtgcttgg
     1021 cagcgactgg accgaggaaa tggagacggt ctggagccgc gtcatcggtg agctgaccgg
     1081 actggccggc tgaaccagca tacttattga aactggccag caacgtttca gccgaccgga
     1141 gcgaggcctc tcgtctgggc ttcctcgcgt aatctcggca gcacatcttt cgccagcagc
     1201 ttaagactct tctccgcctc gtcgtgggtc agaaagccgg agcggccgat aaaaatcaaa
     1261 tgcccgaagc cgccgagcgt gtcgtaagcg gccatgatct gcttcaccac ggtttccggt
     1321 ttgccggcga acatgatctg ccgttggatt gcctgctccg ccgtcatcgt gcgcaaggca
     1381 tccgcgggcc gtgccaccgg cgcctcgccg ggccgaggct tcgtgcgata gatcccaggt
     1441 gccatttccg gcggcatgcg gccgggcaaa aaggtggaga attgcggtgc ctgcttcagg
     1501 ctggtgttca ggaaccacaa caatttcgtg ccgatcgata cgccttcctc atcggtatcg
     1561 ccgacgtaaa cgaacgcgca ataagcaaag cggtcgagcg caggtggtgg caatcccgcc
     1621 gcttcccgcg cctcgcgata cgcagcccag gtccgcttcg tgccgtcgat gccgcgcagc
     1681 accaccgagt tcaccatgcc tcgacggccg agttcgcgcg acgtatcggg atcgccggtt
     1741 gccgtccaca tcggcggatg cggttgctga tacggtcgag gccaaagatt gatgtgccgg
     1801 tgagcgaaat gcttgccttc ccaacggaac gggccgtcct gattctgcaa cgctttggtg
     1861 atcaggtcga tggcttccca gaagcgttcc agattgccga cgggattcgc gttgcccgag
     1921 gccatttcgc tgtcgccgga tttcacgaaa ccgatatcca accggccacg caacaacaca
     1981 tcggcggtgg cgtattcctc ggccacgcgg accgggtctg tgcggatgga aatcagtgtg
     2041 ccctgcgaca gaatacgaac ccgtcgcgtt tgccgagcga gcgcgccgag gacgatcgga
     2101 ctggcgccgt acaaactgtt aatgcccgca tgatgctcga tcgagacgat attgatgccg
     2161 agatcgtcgc acaacaacga ctc
//
LOCUS       DATAVD010001645         1714 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3507068, whole genome shotgun sequence.
ACCESSION   DATAVD010001645 DATAVD010000000
VERSION     DATAVD010001645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3507068"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..445)
                     /locus_tag="VHX39_31620"
     CDS             complement(<1..445)
                     /locus_tag="VHX39_31620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995740.1"
                     /translation="MKYLLLLVAASLGGCSLGPAAAGVAAGGATAAVTANPVVGYAVG
                     LGVRAGADEVLKYYVRVRQNAEQDAIADVAGQSPLGESRRWEIRHTIPIGNARGSLSV
                     IAEIPNALAQCREVMFITDGVNEPFITQICHDSDRWHWAAAEPAVD"
     gene            complement(442..915)
                     /locus_tag="VHX39_31625"
     CDS             complement(442..915)
                     /locus_tag="VHX39_31625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995741.1"
                     /translation="MLAVLMLPGCGAVLTEGASDAAGIAGAGAAASVTKNAAVAAAIG
                     LGAQSVALEGVHYLERRVHRAEQDAIATAAGPLNLNAVAPWSIRHTIPIEDNEHGQLV
                     VSRVLGNGKMLCKEIIFSVDAKKRRDFYVATVCRSNDTWKWASAEPAVPRWGGLQ"
     gene            1059..1313
                     /locus_tag="VHX39_31630"
     CDS             1059..1313
                     /locus_tag="VHX39_31630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995742.1"
                     /translation="MVTAIDLRLIEDVAAIHLVMIVRRLACRRYSAKFVASFSDAKLV
                     THVADLQLVSRRCQAENKIPFDRWVAWQRDGMPRKYPRNQ"
     gene            1384..>1714
                     /locus_tag="VHX39_31635"
     CDS             1384..>1714
                     /locus_tag="VHX39_31635"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEX3995743.1"
                     /translation="MSGNRAPQTIAAANGVAEDSAFGAVAPPIYLTTTFSFAGYGQAR
                     QYDYSRSGNPTRDLLADAIAKLEAGAGAEVVATGMAAIDLSIASLEPGDLIVAPHDCY
                     AGTWRLLT"
BASE COUNT          331 a          533 c          508 g          342 t
ORIGIN      
        1 gatcgaccgc tggttctgcc gcagcccagt gccagcgatc actgtcgtgg catatctggg
       61 tgataaatgg ctcattgacc ccgtcggtga tgaacatcac ctcacggcat tgcgccaacg
      121 cgttcgggat ttccgctatc accgaaagcg aacccctggc gttgccgatc gggatcgtgt
      181 gacgaatctc ccagcggcgg ctttcgccca gtggagattg gcccgcgaca tcggcaatcg
      241 cgtcctgctc ggcgttttgg cggacccgca cgtagtattt gagcacctca tcggctcccg
      301 cacgaacgcc aagtccgacc gcataaccga cgacaggatt ggcagtgacc gctgcggtgg
      361 ctccccccgc tgcaacccct gcagccgctg ggccgaggct acagcctccc aacgaagctg
      421 cgacgagcag caggaggtat ttcactgcag accgccccag cgcggcacgg caggctcggc
      481 ggaagcccat ttccaggtgt cgttgctgcg acagacagtc gccacgtaaa agtcgcggcg
      541 ctttttggcg tccacggaaa atataatttc cttgcagagc atcttgccat ttccgagcac
      601 gcggctgacc accagttgcc cgtgctcgtt atcctcgatg gggattgtgt gccggatcga
      661 ccatggcgcc acagcgttca gattgagcgg gcctgccgct gtcgcgatgg cgtcctgctc
      721 ggcgcgatgc acccggcgtt ccagataatg cacgccttcc aaagcgacag attgcgcacc
      781 aagcccgatt gccgcggcca cggctgcgtt tttggtgacc gacgctgccg caccggcacc
      841 cgcgatgccg gccgcatcgg atgcgccctc ggtcagtacc gctccacatc ccggcagcat
      901 aagaacggcc agcaacgccg ttatcctcag tgttgaactt atgttctcat tcaagccgtg
      961 acggtccccg atcaaagccg ttctcataat ttaccgtttg ccggaagtct acccggacgc
     1021 acttcaaaat cggtcgcaga ctgagagtga tggtatttat ggtgaccgcc attgatctgc
     1081 gtttaattga ggacgttgct gctatacact tggtaatgat cgtgcggcgt ctggcctgtc
     1141 gtcgctacag tgctaaattc gtggcttcgt tttcagacgc gaaattggta acacatgtgg
     1201 cagatttgca actggtttcg cgccgatgtc aggccgaaaa caaaattcca tttgacagat
     1261 gggttgcatg gcagcgcgac ggcatgcccc ggaaataccc gcgaaaccag tgaccgtcct
     1321 tgccgcggca gggttcacga cgtaagcgag cgcggtggaa cctcacggca ggagagcagg
     1381 cggatgtccg ggaacagagc ccctcaaacg atcgcggcgg cgaacggcgt tgccgaggac
     1441 agcgccttcg gggccgtggc gccgccgatc tacctgacga ccaccttcag tttcgccggc
     1501 tatggacagg cgaggcagta cgactattcg cgatccggca atccaacgcg cgatctgttg
     1561 gccgacgcaa tcgccaaatt ggaggcggga gccggtgccg aggtggtggc gaccggaatg
     1621 gccgcgatcg atctgtccat cgcgtcgctt gaacccggtg atctcatcgt cgcgccgcac
     1681 gattgttacg ccggcacgtg gcggttgctc acct
//
LOCUS       DATAVD010001646         1961 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1086383, whole genome shotgun sequence.
ACCESSION   DATAVD010001646 DATAVD010000000
VERSION     DATAVD010001646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1086383"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..548)
                     /locus_tag="VHX39_31640"
     CDS             complement(<1..548)
                     /locus_tag="VHX39_31640"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEX3995744.1"
                     /translation="MEQTLAVETKHVKEVVETVVEILREPVADETSPSVAANSFEADA
                     LRAEIIAVGRKLWQRQYVDGNGGNITVRLGSHYVLCTPTMMSKGDLKPADICLCDLEG
                     NILAGDRVRTSELLLHLQIYRVNPRARAVVHCHPPHATAYAITGSTPPVGLIPEYEVF
                     VGPAALAPYETPGTQAFAETVLP"
     gene            complement(716..>1961)
                     /locus_tag="VHX39_31645"
     CDS             complement(716..>1961)
                     /locus_tag="VHX39_31645"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0051119 - sugar transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HEX3995745.1"
                     /translation="AIDALVRLYHLSPEGKGWTVAIALIGTVVGSLAAGVVGQKLGGR
                     ETLRITAILYVISAIGGALAWSWSSLMIFRFIGGLGIGASSVLGPVYIAELAPAKWRG
                     RLVGAFQFNVVLGILLAYTSNYVIRTLHLGATEWRWQVGVAAIPALGFLILLFGIPRS
                     PRWSASKDRIDEALEVLKMMGEPDPEAELADIRAALNQEHATAHEPVFRWKYRYPLFL
                     AISIGAFNQLAGINAILYYLNDIFIAAGFSQISGDEQAIAIGFTNLIFTLVGMSVIDK
                     LGRKTLLLIGAAGTASCLIGVAWIFATHSHPGALVWLLVTYIAFFALSQGAVIWVYIG
                     EVFPNHVRSKGQGVGNASHWIMNTIIALVFPILAESLGRSVPFIFFAVMTVVQFIVVL
                     AVYPETKGQTLEALQRKLVPAK"
BASE COUNT          402 a          636 c          574 g          349 t
ORIGIN      
        1 ggcaacaccg tctccgcgaa tgcctgggtg ccgggagtct catagggtgc aagcgccgcg
       61 gggccaacga agacttcgta ttccggaatc aatcccaccg gaggcgtcga ccctgtaatc
      121 gcgtaggccg tggcatgggg cggatgacaa tgcacgaccg cgcgcgcccg tggattcacg
      181 cggtaaatct gcagatgaag caaaagttcg ctggtgcgga cgcggtcgcc ggcaaggatg
      241 ttgccctcga gatcgcagag acaaatgtcg gccggcttca ggtcgccctt gctcatcatg
      301 gtcggcgtgc acagcacata atgcgagcca agccgaaccg tgatgttgcc cccgttgcca
      361 tcgacgtact gccgctgcca cagcttgcgg cccaccgcga taatctcggc gcgcaatgca
      421 tccgcctcaa acgaattggc cgcgaccgag ggtgaggttt catccgcgac cggctcgcgc
      481 aggatctcga ctaccgtttc caccacttct ttcacgtgct tcgtctccac agccaatgtt
      541 tgttccatgg cggatgtttc ctcccgcggc cagcgaaatg ggccgattct ttggtgtccc
      601 tagtttatat actgggcgcg agatcgttat ctgccggtga ctcgggtcac gcttgccaag
      661 tacgcctgaa cgtgtccacc ccgcatgcct gtcaggagca ggtgcgcggc cgggttcact
      721 tcgccggaac cagctttcgc tgcagcgcct ccagcgtctg gcccttggtc tccggataca
      781 ccgccaggac cacgataaat tgcacgaccg tcattaccgc gaagaagatg aacggcacac
      841 tgcgtccgag gctctccgcg agaatcggga ataccagcgc gatgatcgtg ttcatgatcc
      901 agtggctggc gttgcccacg ccctgcccct tggaccgcac gtggttgggg aagacctcgc
      961 cgatgtagac ccagatcacg gcgccctggg acagcgcgaa gaaggcaata tacgtcacca
     1021 gcagccacac cagcgcacct ggatgcgagt gcgtcgcaaa gatccaggcc acgccgatca
     1081 ggcagctcgc cgtacctgcc gcgccgatca gcagcagcgt cttgcgcccc agcttgtcga
     1141 tcacactcat gccgaccagg gtgaagatca ggttggtaaa accaatcgcg atcgcctgct
     1201 cgtcgcccga gatctggctg aacccggcgg caatgaagat gtcattgagg tagtacaaaa
     1261 tggcattgat tccggccaac tggttgaacg cgccgatcga aattgccagg aacagcgggt
     1321 agcgatactt ccagcgaaac accggctcgt gggcggttgc atgttcctgg ttgagcgccg
     1381 cgcgaatgtc agccagttcg gcctcgggat ccggctcgcc catcatcttc aacacttcca
     1441 gcgcttcgtc gatgcgatcc ttcgaagccg accagcgcgg gctgcgtgga atgccgaaca
     1501 gcaggatcag aaagccaagc gccggaatgg cggccacacc cacctgccag cgccattcgg
     1561 tcgcccccag atgcagggtg cggatcacgt aattcgacgt gtaagccagc agaatgccaa
     1621 gcaccacatt gaactggaat gcacccacca gccgcccgcg ccacttggcc ggtgccaact
     1681 cagcgatgta gaccggtcct aacaccgacg acgcgccgat gccgagtccg ccgatgaagc
     1741 gaaagatcat cagcgaggac cagctccacg ccagggctcc gccgatggcc gagatcacat
     1801 aaaggatggc cgtgatccgc agtgtttccc ggccgcccag cttctggccg acgacgcccg
     1861 ctgcaagtga tccgaccacc gtgccaatca gcgcgatggc caccgtccag cccttgcctt
     1921 cggggctgag gtgatagagc ctcaccagtg catcgatggc g
//
LOCUS       DATAVD010001647         4183 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2389557, whole genome shotgun sequence.
ACCESSION   DATAVD010001647 DATAVD010000000
VERSION     DATAVD010001647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4183
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2389557"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..717
                     /locus_tag="VHX39_31650"
     CDS             <1..717
                     /locus_tag="VHX39_31650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEX3995746.1"
                     /translation="ADVMHNSATINLNVLDACHKRNIKRIFYSSSACMYPAYNQEDPD
                     NPKCSEESAYPAAPDSEYGWEKLFSERLYLAYRRNYGIQAHVARYHNIFGPQGTWTGG
                     REKAPAALCRKIAMARSGDTIDIWGDGKQTRSFLYIDECLEGTTRLLRSDFSGPVNVG
                     SEEMVSINQLVDIIADIAGKRIEKQHIEGPQGVRGRNSDNHLIKQRLGWAPSQALRVG
                     LEKTYTWIEQQVRGNKPSFD"
     gene            complement(1569..3077)
                     /locus_tag="VHX39_31655"
     CDS             complement(1569..3077)
                     /locus_tag="VHX39_31655"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3995747.1"
                     /translation="MAKGPAVITGGLVLAATGQVAPSDLLLQDDLIAAIAPPGSVTSD
                     AVRRVDGANRLIIPGLINAHTHGHGGLAKGSGDRWSLETLLNAGPWLNGGRTDDDRYL
                     STLLAAVEMVRKGCTACYDLAAMLPFPSISGLDSVARAYGDVGMRAVIAPMVADRSFY
                     QAIPGLLEAFPADLRAVAEAMQTAPGETTLAAIRETASTWSHPADRIRLGIAPTIPLH
                     CSDTFMIGCRDLAAEFGLPLQTHLAESSVQRAAALARYGMTLTRHLDRLGVLGPRFSA
                     AHAIWIDQDELELIAARGGAIAHNPGSNLRLGNGVADMRPAITQGIPVGVGTDGSSSA
                     DNQNMFEAMRLAAFVSRVFDRVPEDWIGAIEALRLATEGSAAVLGMADLIGRIAPGYK
                     ADLVFLDLDHVNLVPLNNAPQQLVNGEDGTSVRDVMIGGEFVLRDGALVGIDWPRIVA
                     RAREAAERLRQGNAATRAATERLAPLISQFCVGLGRGAHDLPRNVRVNPQRS"
     gene            complement(3161..4063)
                     /locus_tag="VHX39_31660"
     CDS             complement(3161..4063)
                     /locus_tag="VHX39_31660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HEX3995748.1"
                     /translation="MLDLVIESRPRDLGGGLAVGRVLPFARRRMVGPFIFLDHMGPAA
                     FQPGQGIDVRPHPHIGLATVTYLFDGEIHHHDNLGFSQKIFPGEVNWMTAGSGIVHSE
                     RTDPSLRSSGGLMHGMQAWVALPQEDEETAPGFAHHGAEALPEFSAGGVWARLIAGSA
                     YGLRNNVKTFSPLFYLHAELDQGATLALPADHAERAAYVVSGAVAHEGVRYHAGQLLV
                     FAAGGEPVVTAEDGPARLMLLGGASIGPRFIWWNLVSSRQERIEQAKADWKGGRMTLP
                     PDDNSEFIPLPENPPHAHEATHPV"
BASE COUNT          846 a         1326 c         1258 g          753 t
ORIGIN      
        1 gccgacgtca tgcataactc ggcgaccatc aatctgaacg ttctcgatgc ctgccataag
       61 cgcaacatca agaggatctt ttactcgtcc tctgcctgca tgtaccctgc ttacaaccag
      121 gaagatccgg acaatccaaa atgctcggaa gagtccgcct atccggctgc accagacagt
      181 gaatacgggt gggagaagct gttcagtgag cggctgtatc tggcgtatcg ccgcaattat
      241 ggcatacagg cccacgtcgc ccggtaccac aatattttcg ggccgcaggg cacctggacc
      301 ggcgggcgcg aaaaggcgcc ggcggcccta tgccgcaaaa ttgcgatggc acgcagcggc
      361 gacacgatcg atatctgggg tgacggcaaa cagacccgct cgttcctgta tatcgacgaa
      421 tgcctggaag gtacgactcg cctgctgcgg tccgacttca gcgggccggt gaacgtcggg
      481 tcggaggaga tggtatcgat caatcaactc gtcgacatta tcgccgatat cgccggcaaa
      541 cggatcgaaa agcagcacat tgaggggccg caaggcgtgc gcgggcggaa ttctgacaac
      601 cacctgatta aacaacgtct ggggtgggcg ccgtcgcaag cgttgcgtgt cggactggag
      661 aaaacttaca cctggatcga acagcaggtc cgaggcaata agcccagttt tgactaagac
      721 tggataccga gcggatgttc agcgccttgc tgaggcacgg ggtggcctca catcggcgct
      781 gagcgtccgg tcatttcgcc tccgtgttca gcgataatcg gagccagagg cacgaagcac
      841 gcaacgagag cggacgccat tgagcgctgt ctcattcgtt gtcggtccta ttgttacccc
      901 ccgaacgtcc gccactggaa catctggctg agccatgggt ttcgcggcca tccagaattc
      961 ctcgcatcct cgccattcac actcctttac gaccgcctca tcgggggccc gatgacggaa
     1021 gcgctattct attgacatta ggccaatatt gagacgcccg gcgggtgaca caatcgaggt
     1081 tcgccgcaaa tcgtcgaatt tcgtagactg ttgtgaatta ttaggaacca gtcccaggcg
     1141 caaactctaa aactagccag cgcatgttcc gttgacttaa aggacgctat cgtcccgacc
     1201 atcggagcac ggcggatcgc gatcgctttt accaggtgct gcgggctcat accacgctaa
     1261 agggtctcct caagcgcgtc caatatgaca ttgagcataa gaatcattta ggtttccggc
     1321 tgacagggat ttatcgacgg atcaaagttg gaattaaaat tggcgtgaca cactaagcaa
     1381 tgcggctgtg acaacggcaa gcgtcaattt gcccgggatc agttcggttg cggtcgagtc
     1441 tggtaaaggc tcgtccactg atgaaggttt ctgccgaccg tggatgcgca gatatctgcg
     1501 gcagcacggc aattgcgaaa gtcagcgggt accgacaccc aaacaccggt ttcggcctgc
     1561 gctgcccgtc acgatcgttg cggattgacc cgcacattcc gcggcagatc atgggcgccg
     1621 cggccgagcc cgacgcaaaa ttgactgatc agcggcgcca gacgttcggt tgccgcgcgg
     1681 gttgccgcat tgccttgccg caaccgttcg gccgcctccc gggcacgggc gacaatgcgc
     1741 ggccaatcga tccccaccag cgcaccatcg cgcagcacga actcgccgcc gatcatgaca
     1801 tcgcgcaccg atgttccgtc ctcaccattc accaattgct gcggggcatt gttcagcggc
     1861 accaggttca catggtcgag atcgagaaac accagatccg ccttgtagcc aggcgcgatg
     1921 cgaccgatca gatcagccat cccgagcacc gcagcgctgc cttcggtggc aagccgcaac
     1981 gcctcgatcg caccgatcca atcctccggt acccggtcga acacgcgtga cacaaacgcc
     2041 gccaggcgca tcgcctcaaa catgttctgg ttatccgccg aggacgaacc gtccgtcccc
     2101 acgcccaccg gaatgccttg cgtaatggcc ggacgcatgt ccgcgacgcc gttgccaagc
     2161 cgcagattgg agccaggatt gtgcgcaatg gcaccgcctc gtgcggcgat cagttcgagc
     2221 tcgtcctggt cgatccagat cgcgtgcgcc gcactgaacc gcggcccaag cacgcccaac
     2281 cgatcgagat gccgtgtcag tgtcatcccg taacgggcca gcgccgccgc gcgctggacg
     2341 ctggactctg cgaggtgcgt ttgcagcggc agtccaaact cggctgcgag atcacggcag
     2401 ccgatcatga acgtatcgga acaatgtaac ggaatggtcg gcgcgatacc gaggcggata
     2461 cggtctgcgg gatgcgacca ggttgaagct gtttctcgta ttgcggccaa cgtcgtttcg
     2521 cccggagcgg tttgcattgc ctcggccacg gcgcgcaaat ccgccgggaa cgcctcgagc
     2581 aatcccggga ttgcctgata gaaactgcga tcggcgacca tcggtgcgat gacagcgcgc
     2641 atgccgacat cgccataggc gcgggcaacg ctatccagcc cggagatgga tgggaacggc
     2701 agcatcgctg ccaggtcgta acaggcggtg cagcccttac gcaccatctc gactgccgcg
     2761 agcaacgtcg acagataccg gtcatcgtcg gtgcggccgc cgttgagcca ggggccggca
     2821 ttcagcaaag tttccaacga ccaacggtcg cccgagcctt tagccaaccc accgtggccg
     2881 tgcgtgtgcg cattgatcag accgggaatg atgagccggt ttgctccgtc gacgcggcgc
     2941 acagcgtcgg atgtcacgct gccgggcggc gcgatcgctg cgatcagatc gtcctgtagc
     3001 agcagatcgg acggtgcgac ctgaccggtc gccgccagca ccaggcctcc tgtgataacc
     3061 gccggacctt ttgccatgcg cgcctccgga ttttcggcgc acaggctcgc acagcgatgt
     3121 tggtttgacg atagggccgt gcggatcaac ccgcgcgaga tcagaccgga tgcgtggcct
     3181 cgtgggcgtg cggtggattc tccggcagcg gaatgaattc gctgttgtcg tccggcggca
     3241 gtgtcatgcg gccgcctttc caatccgctt tggcctgctc gatccgctcc tgacgcgagg
     3301 acaccaggtt ccaccaaatg aagcggggac caatgctcgc cccgcccaga agcatcaggc
     3361 gcgcggggcc atcttccgcg gtgacgacag gctcgccacc tgcggcaaac accagcaact
     3421 ggccggcatg gtaccgcacg ccctcgtgcg caaccgcgcc ggacaccaca tacgccgctc
     3481 gctcggcatg atcggcgggc agcgccagtg tggcgccttg gtccagctcg gcatgcagat
     3541 agaacagcgg cgagaacgtc ttcacattgt tgcgcagccc gtaagcggag ccggcgatca
     3601 gccgcgccca aaccccgccg gcggaaaatt ccggcagcgc ctcggcccca tgatgggcga
     3661 agcctggagc ggtctcctcg tcttcctgcg gtagggcgac ccaggcttgc atgccgtgca
     3721 tcagcccgcc gctcgagcgc aacgacggat cggtgcgctc agagtgaacg atgccggagc
     3781 ccgcggtcat ccagttcact tcgccgggaa aaatcttctg actgaaaccg agattgtcgt
     3841 ggtggtggat ttcgccgtcg aacaggtagg tcacggttgc cagcccaatg tgcggatgcg
     3901 gccggacgtc gatcccttgg ccaggctgga acgccgcggg tcccatgtgg tcgaggaaaa
     3961 tgaacggccc aaccatccgc cggcgagcga aaggcagcac ccgtcccacc gccaggccgc
     4021 cacccagatc tctcggccgg ctttcgatga ccaaatcgag catgggtgcc tccttccgtg
     4081 atgcccaccg ccagacgtgc gggatcatcc tgtctgtggt tcgggtgtca atcgcctcgg
     4141 gcgcgtcaga aaggccccct cgccaccggc gaagggcctt cgg
//
LOCUS       DATAVD010001648         9021 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2580393, whole genome shotgun sequence.
ACCESSION   DATAVD010001648 DATAVD010000000
VERSION     DATAVD010001648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9021
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2580393"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="VHX39_31665"
     CDS             complement(<1..185)
                     /locus_tag="VHX39_31665"
                     /inference="COORDINATES: protein motif:HMM:NF023144.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylpyruvate isomerase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3995749.1"
                     /translation="MLPQAEDFRAEANELHALLATLKETDWQRPTLFKAWTVNDIVQH
                     LHDSDLMAAASVAGPEP"
     gene            complement(196..1524)
                     /locus_tag="VHX39_31670"
     CDS             complement(196..1524)
                     /locus_tag="VHX39_31670"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX3995750.1"
                     /translation="MTVTEQLGRFVATSARDSIPPAVWHEGKRSLLNFIGCALGVAHT
                     PPVEMAVRVLLPLSGTDRVTLIGRTERLDPVSASFVNAIGGNLLDYDDTHLRTVIHPT
                     APVAPAVLALAEQRGLSGSAALHAFILGAEVACRIGNAVSPGHYARGWHITSTCGVFG
                     AAAAAAKLLGFDAERTAHALGIAASQSAGIVENLPSAAKNVSVGNAARNGLFAALLAE
                     AGYTAAPSAIEGALGWARAMGDEPDVATALSGLGEQWELATNTYKPYPAGIVMHAVVD
                     ACLALRRDHRLTPADIAEITISGDQLLLDRGDRTVANDRDARVSIHHCAAVAFQFGRA
                     GLWEFSDAAVHDPAVTALRALTRARLDANSPRGAATATVRTRDGRSLTTTVTHAKGST
                     ADPLTDAEIEAKLRDLAQQGNFAGSVDNVIALIWQLDTAATITPLATALT"
     gene            1660..2376
                     /locus_tag="VHX39_31675"
     CDS             1660..2376
                     /locus_tag="VHX39_31675"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX3995751.1"
                     /translation="MNDGKVTALHANRGFRGLAATSTVDLVAERLREWIIASWLRRGQ
                     PLTVRDTARDFGAPQSLVRAAFVRLREDGFLMRSTRGTVVAPLCLEAQELFKRRLPLE
                     VQLTRLATRRLTTFGLRLLDRIEEEMVEAQRRYDLPNAQRHNYRFHVALYRFADRPDL
                     LAEVQTLWAGFPFDLMTIMPSRLPAVAREHEILLAALHAKDPRSAAGAMHYHILNGWQ
                     EFQRHYPLQLERQPRLARGC"
     gene            2439..3170
                     /locus_tag="VHX39_31680"
     CDS             2439..3170
                     /locus_tag="VHX39_31680"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX3995752.1"
                     /translation="MAVSTKRGLASDTAKPAEPRPLGQTWSIAPIQTKEHQVAELLRE
                     KIIAGGVVRGQKLKQAELAKMLNVSITPVREALRLLEAEGYVHVSSHRGAIVAPFQID
                     QVDELYDLRMTLEGKLTAAATRNMSPGDVNGLIALNENIRSALASNSREDIRGNNFRF
                     HFRLYEYADLAHTLEFVRVLWAKYPFDLLGSIPGRPPRVLDEHAELLKALKEQDARKA
                     AKAMQAHITAGHRDFKATFALEPRR"
     gene            3227..4258
                     /locus_tag="VHX39_31685"
     CDS             3227..4258
                     /locus_tag="VHX39_31685"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEX3995753.1"
                     /translation="MTHGTREDRVHLTVAEARGLSEAAMRGAGYDDDDARILADHVLD
                     AALCGYEYSGLPKLLNVVDAKEFKRPRQPVSVLRETGSTAMLDGGNNSGMIAAYRATE
                     VTIERAKTAGLAIVCLANAWMTGRSAYYCEMIARAGMVGIHTVSSPPAVAPFGGAAPA
                     LGTNPIAFGFPTEGDPLVIDMGTSAFMGTDLKFRERLDTPIPEGVAIGPDGQPTTDAG
                     VALRGALLPFGGPEGGYKGFGLALAMDALGALTARTRSEDLVSGYMFIAFKPDLFLPL
                     AEYRQEVTRRIEVIKATPRQAGVTEIRIPGERGYRTRERLMHDGIEIDRKIYDALRRL
                     SDGHLDHGG"
     gene            4411..4647
                     /locus_tag="VHX39_31690"
     CDS             4411..4647
                     /locus_tag="VHX39_31690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995754.1"
                     /translation="MPRTILPLDSEGRVMPLAFTALGLPAVDVGRVNPSPYDLRHLLT
                     VRRVVSFIEEFYEQDFAFLRGNPMFTGLMAQPGR"
     gene            5024..6067
                     /locus_tag="VHX39_31695"
     CDS             5024..6067
                     /locus_tag="VHX39_31695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995755.1"
                     /translation="MSDRFDEDLLDEMAEEPEGKGGHAAFDEFEGADEIEGADEFDDV
                     NEFDEADEFDGPVEFEAMDEFDELDEPGDAFDAEDSADELEEGVTDALEAADADEFWG
                     GLGRALKRVGRGVGKVARVVAPIAKMIPIPQAQLIGRAADIVGKVMADEGDEMDGFDD
                     LADYADDEDSIDALAPAIAGVAIKSALKHHTAAMPRAQRRALVKTVTAATRHLVRKHG
                     PRAVQAMPAIVSHARKVVARKRLPARHLPRVVAQTTRVAARSPRVLRKLASTTHRMRM
                     RHGGRRHHRGLARGIGRTRFRTHGMGTAMSHGGHGSMRRIGVSGSAATCPNCGRRRTM
                     RLHGPIHLTITSG"
     gene            6194..7498
                     /locus_tag="VHX39_31700"
     CDS             6194..7498
                     /locus_tag="VHX39_31700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995756.1"
                     /translation="MGAKAILEVRAFLRERIIGLTARTRRLARIDYDSVGIRPQDLPF
                     APSPDHFKAANDRLASIDQEITRRMRTVQREWTHTGPQRVLIDIALVEREIDRARRAF
                     GMFFEVFSQRGSTYAPVLAAHDVIARDCYDAVRQHAPRLLSQKALAPVTYMEHGYSPA
                     TMRRGAVLTRLLGELNPFPVIRIPWDRDNPWQTVFIHEIAHNLHADMGIWYENKIAVT
                     KRVLSASGDPRLAAIYGRWHKEIFADLAAMLLSGPAVARGMALFLAHPAPRALTYRVG
                     AHPTGFLRVLLLVEMLRRMGFAREAAQLDRVWRTLYNPRRFHRLPERLLRSADSLIPQ
                     VVDEIAYQTRRNLAHRALADVIRFRREDQEAILAGKQHLIEGHLPDRSLPPRFLVSAG
                     SYALQSGRLQARSLSAEVVGRLIEGHPPAPVTISAAQAALAS"
     gene            7528..>9021
                     /locus_tag="VHX39_31705"
     CDS             7528..>9021
                     /locus_tag="VHX39_31705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995757.1"
                     /translation="MSLSPNGYHSGGGSSGSPHNGAAHSHDAAHGHAGGGHVGLALDN
                     MLRNHLKVNNPRDARQIAEGLMAYYQDLPQAAGIRQEVMGLPSLPPGAMLSQQRSLTA
                     QASSSDTEFRIANGDVEKALIDLASNPLTNDITPEMQGWGDSIRAAVTQGLAAARQGL
                     DPTQRDKVIAVRRQLGEYARMARFVGALSPGMTQNFRRLGRALDEVAAVLLVMLGESL
                     ASVGFATGYYLLQVPLPELQQRRDAVVYALRNFNGGAQQSYGSNDWPRGIDAYRRLYQ
                     WLEEQGQGDLRSLLLENEIAQTMDGLITRAQNGTSDGLRALGVTAQLDIERFRRMAIV
                     APGAMSREDGHFDRSPPLESYLQALELFAETFRPAGGLRLLRIARPPILLYGLYNMSQ
                     LEDDNSLFDLISVRGTLATIFDGLFPSNSARGVQPQVLLDMMLLELDRGIDLLALGSL
                     TSEGGPTEWRAMAFWSIIYVIYNLVTNGPNFFGRVGPIPDYIAIAPPK"
BASE COUNT         1573 a         2739 c         3110 g         1599 t
ORIGIN      
        1 aagggttcgg ggccggcgac ggaggccgcc gccatcaggt cgctgtcgtg cagatgctgc
       61 acgatgtcgt tgactgtcca ggccttgaac agagtgggcc gctgccagtc ggtctccttg
      121 agagtggcga gcaaggcgtg cagttcgttt gcctccgcgc ggaaatcttc ggcctgtggc
      181 agcatgactt ggtcctcagg ttaatgcggt ggccaggggg gtgatggttg ccgccgtatc
      241 caattgccag atcagagcga tcacgttgtc gacggaaccg gcgaaattgc cctgctgggc
      301 gaggtcgcgc agcttcgcct cgatttcggc gtcggtgagt ggatcggcgg tgctgccttt
      361 ggcgtgggta acggttgttg tcagcgatcg gccgtcgcgg gtgcgcacgg tggcggtggc
      421 ggcgccgcgt gggctgttgg cgtccaggcg agcccgtgtc agcgctcgca gcgcggtgac
      481 cgccgggtcg tggaccgcgg cgtcggagaa ttcccacagc cctgcccggc cgaactggaa
      541 ggcgacggcg gcgcaatggt ggatgctgac acgggcgtcg cggtcgttgg caaccgtgcg
      601 gtcgccgcga tcgagcagaa gctgatcgcc ggagatggtg atctcggcaa tgtcagccgg
      661 tgtcaggcga tgatcgcggc gtagcgccag gcaggcatcg accaccgcat gcatcacgat
      721 tccggccgga tagggtttgt aggtgttcgt tgccagttcc cattgttcgc ccaggccgga
      781 tagcgcagtg gcgacatcgg gttcgtcacc catggcccga gcccagccga gtgcgccttc
      841 gatggcggat ggcgcggcgg tgtagccggc ctccgccagc agggcggcga acaggccgtt
      901 gcgggcggcg ttgccgacgc tgacgttctt ggcggcgctg ggcaaattct cgacgatgcc
      961 ggccgattgg ctggcggcga tgcccaatgc gtgggcggtc cgttcagcgt cgaagccaag
     1021 cagtttcgcg gcagcggcgg cggcgccaaa gacgccgcag gtggacgtga tgtgccagcc
     1081 gcgggcgtag tgaccgggtg agaccgcgtt gccgatgcgg caggcgacct cggcgccgag
     1141 gatgaaggcg tgcagcgccg ccgaaccgga caagcctcgc tgttcggcca gcgccagcac
     1201 cgcgggtgcg acgggcgcgg tcgggtggat gacggtgcgc aggtgggtat cgtcatagtc
     1261 gagcaggttg ccgccgatgg cgttgacgaa ggatgcactg accggatcga ggcgttcggt
     1321 gcggccaata agggtgacgc gatcggtgcc ggagaggggc aacaggaccc gcacggccat
     1381 ctcgaccgga ggggtgtggg cgacgcccag ggcacagcct atgaaattca gcagcgagcg
     1441 cttgccttcg tgccaaacgg ccggcgggat actgtcccgt gccgaggtcg cgacaaaccg
     1501 gccgagttgt tcggtaactg tcaacgccga catccttctg tatcgcggtt cagcgtggca
     1561 catccggtgg atggcgggca attcgtgtcg gggcttgggg ggcggtgcca aaccagacta
     1621 taccggccga cgcctgggca atggtggagg acgcggccgg tgaacgacgg caaggtgacg
     1681 gctttgcatg ccaatcgtgg cttccgcggg ctggcggcga cctcgaccgt cgacctggtg
     1741 gccgaacggt tgcgcgaatg gatcatcgcc agttggctgc ggcgcggcca accgttgacc
     1801 gtgcgggata ccgctcggga tttcggtgcg ccgcagagcc tggtgcgggc ggccttcgtg
     1861 cggctgcgcg aggatggctt cctgatgcgt tcgacgcgtg gcactgtcgt cgcgccgctg
     1921 tgtctggagg cgcaagagtt gttcaaacgc cgcctgccgt tggaggtgca gttgacgcgc
     1981 ctggcgacgc ggcggctgac cacgttcggg ctgcggctgc tggatcgtat tgaagaggaa
     2041 atggtggagg ctcagcgccg gtacgaccta ccaaacgcgc aacggcacaa ttatcgcttt
     2101 catgtggcgc tgtaccgttt cgccgaccgc ccggatctgc tggccgaagt gcagacacta
     2161 tgggccggct ttcccttcga cctgatgacg atcatgccga gccggctgcc ggccgtggcg
     2221 cgggagcatg aaatcctgct ggcggccctg catgcgaaag acccgcgatc cgccgcgggt
     2281 gccatgcatt accacatcct gaacggatgg caggaattcc agcgtcacta cccgttgcaa
     2341 ctcgaacggc aaccacgcct tgcgcgcggt tgctgagttg cgttcggcgc gggtgggcta
     2401 taggtttttg taatgaactt cccataaagg gcctggacat ggctgtttca accaagcgtg
     2461 gtcttgcaag cgataccgcc aaaccggctg aaccccggcc gctcgggcag acgtggagca
     2521 ttgcgccgat ccagaccaag gaacatcagg tcgccgagtt gttgcgcgaa aagatcatcg
     2581 ccggtggggt ggtgcgcggg cagaagctca agcaggccga actggcgaag atgctgaacg
     2641 tttcgatcac gccggtgcgc gaggcactgc gcctgctgga agccgagggg tatgttcatg
     2701 tctcctccca ccgcggtgcc attgttgcgc cgttccagat tgaccaggtc gatgaactgt
     2761 atgacctgcg gatgacgctg gagggcaagc tgaccgccgc cgcgacgcgg aacatgtcac
     2821 cgggtgacgt gaacgggctg atcgcactga atgagaatat ccgttccgca cttgccagca
     2881 attcgcgcga ggatatccgg ggcaacaatt tccggtttca tttccgcctg tacgaatacg
     2941 cggatttggc gcacacgctg gagtttgtac gtgtgctgtg ggcgaaatat ccgttcgacc
     3001 tgctggggtc gattcccggc cggccgccgc gcgtgctgga cgagcacgcc gaactgctga
     3061 aggcgctgaa ggaacaggat gcgcgcaagg ccgccaaggc gatgcaggcg cacatcacgg
     3121 cgggacatcg ggacttcaag gcgacgttcg cgctggagcc tcggcgctga ggccgctgtc
     3181 gggcgatcgt aatatcaaac gcaacagttt aatcgaggat gccaggatga cccacggaac
     3241 ccgcgaggat cgtgtccacc tgacggtcgc cgaggcgcgg gggctgagcg aggcggcgat
     3301 gcggggcgca ggatatgacg atgacgacgc gcgcatcctg gcggaccacg tgctggacgc
     3361 ggcgctgtgc ggctacgaat attccggcct gccgaaactg ctgaacgtcg tggatgcgaa
     3421 ggagttcaag cggcctcggc agcctgtctc ggtgctgcgg gaaacgggat cgaccgccat
     3481 gctggatggc ggcaacaaca gcggcatgat cgcggcgtac cgcgccaccg aggtgacgat
     3541 cgagcgcgcg aaaaccgccg gacttgcgat cgtttgtctt gccaacgcgt ggatgacggg
     3601 gcgcagcgcc tattactgcg aaatgatcgc ccgagccggc atggtcggca tccatacggt
     3661 gtcgtcgccg ccggcggtgg cgccgtttgg cggcgcggcg ccggcattgg gcacgaatcc
     3721 gattgccttt ggcttcccga ccgagggcga cccgctggtg atcgacatgg gcacctcggc
     3781 gttcatgggc accgacctga agttccggga gcgtcttgac acgccgatcc cggagggtgt
     3841 ggcgatcggg ccggacgggc agccgacgac cgacgcaggt gtggcattgc ggggcgcgtt
     3901 gctgccgttc ggcgggccag agggtggcta caagggcttc ggcctcgctc tggccatgga
     3961 cgcgctgggc gcgttgaccg ccaggacacg atccgaggac ctggtcagcg gctatatgtt
     4021 cattgcgttc aagccggatc tgtttctgcc gctggcggaa taccggcagg aagtcacccg
     4081 gcggatcgaa gtgatcaagg ccacgccgcg ccaggcgggt gtgacggaaa tccggatacc
     4141 cggcgaacgg ggctacagga cacgggagcg ccttatgcac gacggtatcg agatcgaccg
     4201 gaagatctat gatgccttgc gccgtctgtc ggacggccac ctggaccacg gcggttgaaa
     4261 ccaaccgtgg gcgagaatcg ctcccgccac ctatgctcac gtcgctttgc tgcctttgag
     4321 tgaatcaacg cgaggatagc gggatgatcg tttcacatgc tcggcgcttc atcttcttag
     4381 atctggttca tccgactggg cgaccgtgtc gtgccacgca cgattctgcc gctggattcc
     4441 gagggccggg tcatgccgct ggccttcacc gcgcttggcc tgccagcggt ggatgtcggc
     4501 cgggtcaacc catcgcctta tgacctgcgc cacctgctga cggtacgacg cgtggtgtcg
     4561 ttcatcgagg agttctatga acaggacttc gctttcctgc gcggcaatcc gatgttcacc
     4621 gggctgatgg cgcaaccggg ccgctgagtc ctgcccgccc tcaggcacat atttgctggg
     4681 gcctgaatcg gcgcatcggg ccggcgcccg acgtacaagc cgcacaaagc atgcgcaaga
     4741 aacatgacgg gtgtggcatg cttcccgtct gtcactcaga caagctaccc agcccgcgcg
     4801 accagtatcg tgtgactatg ccgatgcaat tccattgtgc ctcaatccgg cctggaacga
     4861 cggggtagac gacaaagccc ctgggaacca ccgacgattg tcatgccacg tcaagcaaac
     4921 cggcatcggg tccgccgcgc cgcaatgccg ttcgaggccc ggtagaaatc gcgtcccaag
     4981 cgtagcgacc agggcacatc gcccgatcac caggagagca acgatgagcg atagattcga
     5041 tgaagacctg ttggacgaaa tggcggaaga gcccgaaggc aagggcggtc acgccgcctt
     5101 cgacgaattc gagggtgccg acgaaatcga gggcgccgat gaattcgacg atgtcaacga
     5161 attcgacgag gccgacgaat tcgacggtcc ggtggagttc gaagccatgg atgaattcga
     5221 tgaactggac gaacccggcg atgctttcga cgctgaggat tcggcggacg agttggaaga
     5281 aggcgtcacc gatgccctgg aggcagccga tgccgacgag ttctggggtg ggcttggcag
     5341 ggcccttaag cgggtcggcc gtggtgtcgg caaggtcgcc cgcgtggtgg cgccgatcgc
     5401 caagatgatc ccgattccgc aggcgcaact cattggccga gccgccgaca ttgtcggcaa
     5461 ggtcatggcc gatgaaggcg atgaaatgga tgggttcgac gatctcgcgg actatgccga
     5521 tgatgaggac tcgatcgacg cgcttgcccc cgccatcgcc ggcgtcgcga tcaagtcggc
     5581 gttgaagcat cacaccgccg ccatgccgcg cgcacagcgg cgcgcactgg tgaagaccgt
     5641 gaccgccgcg accaggcatc tggtgcgcaa gcatgggcca cgcgcggtcc aggcgatgcc
     5701 ggccatcgtc agccacgcgc ggaaggtggt ggcccggaag cgtctgcctg ctcgccatct
     5761 gccacgggtg gtcgcccaga ccacgcgggt ggcggcacgg tcacctcgcg tgctgcgcaa
     5821 gctggcgagc accacccacc ggatgcgcat gcgtcacggc gggcggcgtc accatcgcgg
     5881 tctggcccgc gggatcggcc gcacccggtt ccggacccat gggatgggga ccgccatgtc
     5941 gcatggcggc catggcagca tgcgccgcat cggggtcagc ggatcagccg cgacctgccc
     6001 gaactgcgga cggcggcgga cgatgcgttt gcacgggccg attcacctga caatcacgtc
     6061 gggctgagta aacagaccac tggcgttggg ggaagccggc ataacaggcg gcgtacccca
     6121 gcgttcctcc gccgccttcc gaaaacgtcg acacgcgggt ccgcatgtcg tccggcaagt
     6181 aggacgtcca gtcatgggtg cgaaggcaat tcttgaagtc agggcttttc tgcgggagcg
     6241 gattatcggg ctgaccgcca gaacccgccg gctcgcgcgc atagattatg actcggtggg
     6301 catccggccg caggacttgc cctttgctcc gtcccccgac catttcaagg cggccaacga
     6361 tcgcctggcg tcgatcgacc aggaaatcac ccgccgcatg cggaccgtgc agcgtgagtg
     6421 gacccacacc gggccacagc gcgttctgat cgatatcgcg cttgtcgaac gtgaaatcga
     6481 ccgcgcccgc cgcgccttcg gcatgttctt cgaggtgttt agccagcgcg gcagcaccta
     6541 cgcacccgtc ctggcggcac acgacgtcat tgcgcgggac tgttacgacg ccgtgcgaca
     6601 gcatgcgccg cgcctgctga gccaaaaggc gctggcgccg gtgacttaca tggaacacgg
     6661 ctattcgccg gcaaccatgc gccggggcgc cgtgctgacc cggttgctgg gcgaattgaa
     6721 cccattcccg gtgatccgca tcccctggga tcgcgacaac ccgtggcaaa cggtcttcat
     6781 ccatgaaatc gcgcataacc tgcacgctga catggggatc tggtacgaga acaaaattgc
     6841 cgtcaccaag cgcgtgctgt cggcctcggg cgatcccagg ctcgccgcca tctatggccg
     6901 ctggcacaag gagatttttg ccgatttagc ggcgatgctg ctcagcgggc cggcggtcgc
     6961 ccggggcatg gcgctgttcc tggcacatcc cgcgccgcgg gcgctgacct accgggtcgg
     7021 cgcccatccg accggcttcc tgcgtgtcct gctgctcgtt gaaatgttgc ggcgcatggg
     7081 tttcgccaga gaggcggcgc agctcgatcg ggtgtggcgg acgctgtata atccgcgccg
     7141 attccatcgc ctccccgaac ggctgttgcg cagcgccgac agcctgatac cgcaggtcgt
     7201 cgatgaaatc gcttatcaga ctcggcgaaa cctggcgcac cgtgcgctgg cggatgtcat
     7261 ccggtttcgc cgggaagacc aggaagcgat ccttgccggc aagcagcatc tgatcgaggg
     7321 ccacttgccg gaccgatcgt tgccgccgcg ctttctagtg agcgccggca gctatgcctt
     7381 gcagtccggc cggctgcagg cccggtcgct ttccgcggag gtggtcggcc gtctgattga
     7441 aggccatccg cccgcacccg tcaccatcag tgccgcgcaa gcggcgctgg cctcctgatc
     7501 cgcgaaccca acaaaacgag gtaggtcatg tccctttccc cgaacggtta ccatagcgga
     7561 ggcgggtcat ctggctcgcc gcataacggc gccgcgcaca gtcacgatgc tgcgcatggc
     7621 cacgccggtg gtgggcatgt cggcctggcg ctggacaaca tgctgcgcaa ccacctgaag
     7681 gtgaacaatc cgcgggacgc caggcagatc gccgaagggc tgatggccta ctaccaggac
     7741 ctgccgcagg cggccgggat caggcaggaa gtgatgggcc tgcccagcct gccgccgggc
     7801 gcgatgctgt cgcaacagcg gtcgctgacg gcgcaggcca gttcgtcgga caccgaattc
     7861 cgcatcgcca acggggatgt ggagaaggcg ctgatcgatt tggcgagcaa tccgctgacc
     7921 aatgacatca cgccggaaat gcagggttgg ggcgattcaa tccgagcggc tgttacgcaa
     7981 ggccttgccg ccgctcggca gggtttggat ccgacgcagc gcgacaaggt gatcgcggtg
     8041 cggcgccagc ttggcgagta tgctcgtatg gcgcgttttg tcggggcgct gtcgcccggc
     8101 atgacgcaga acttccgacg gctggggcgc gcgctggatg aggttgccgc ggtgctgctg
     8161 gtcatgctgg gcgaatcgtt ggccagtgtc ggtttcgcga ccgggtatta cttgctgcag
     8221 gtgccgttgc cggagttgca gcagcggcgc gatgccgtgg tctatgcact gcgcaacttc
     8281 aatggcggtg cgcaacagtc ctacgggtcg aacgactggc cgcgcggtat cgacgcctat
     8341 cggcggttat accaatggct ggaagagcaa ggtcagggcg acctgcgttc gcttctgtta
     8401 gaaaacgaaa tcgcgcagac catggatggg ttgatcacgc gcgcgcagaa cggcacctcg
     8461 gacgggctgc gtgccctggg ggtgaccgcg cagctcgata tcgagcggtt ccgccgcatg
     8521 gcgatcgtcg caccgggcgc gatgtcgcgg gaggacgggc acttcgatcg ctcgccgccg
     8581 ctggaatcct atctgcaggc actcgaattg ttcgccgaaa cgttccggcc cgccggcgga
     8641 ctgcgtctgc tgcgcatcgc ccggccgccg atcctgctgt acggcctcta caacatgagc
     8701 cagttggaag acgacaacag tctgttcgac ttgatttccg tgcgtggcac gttggcgacg
     8761 attttcgatg ggttgttccc gagtaacagc gctcgcggcg tgcagccgca ggtgctgctc
     8821 gacatgatgc tgctggaact ggatcgcggg atcgacctgt tggcattggg gtcgttgacc
     8881 agcgagggcg gtccgaccga gtggcgggcc atggcgttct ggtcgatcat ctacgtgatc
     8941 tataacctgg tgacgaacgg ccccaatttc ttcggcaggg tcggtcctat ccccgattat
     9001 atcgcgatcg cgccgccgaa a
//
LOCUS       DATAVD010001649         4138 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1646232, whole genome shotgun sequence.
ACCESSION   DATAVD010001649 DATAVD010000000
VERSION     DATAVD010001649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4138
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1646232"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..2203)
                     /gene="glgB"
                     /locus_tag="VHX39_31710"
                     /pseudo
     CDS             complement(1..2203)
                     /gene="glgB"
                     /locus_tag="VHX39_31710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002674.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003844 - 1,4-alpha-glucan branching
                     enzyme activity [Evidence IEA];
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
     gene            complement(2205..>4138)
                     /locus_tag="VHX39_31715"
     CDS             complement(2205..>4138)
                     /locus_tag="VHX39_31715"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
                     /protein_id="HEX3995758.1"
                     /translation="GNPWEFERPEVSHMIGFGGSVRRETRADGTDHHVWEPAETVEAI
                     AYDTPIVGWRGRHVNTLRLWSARAPDPLRLDTFNQGDHVGALAARARANAISQVLYPS
                     EDTPAGQELRLRQEYFFSAASLHDLLYRHIHQHGDLRTLPDFAAIQLNDTHPAIAIAE
                     LMRMLVDVHDIPWKEAWAITTATFSYTNHTLMPEALEAWPVHLLERLLPRHMQIIFLT
                     NLLHLDGLRAAGHTDPALLSSVSLINEHNGRQVRMGAMAFLGSHRVNGVSELHTNLMR
                     ATVFHDMHMLYPDRIVNKTNGITFRRWLFEANPGLTSALVDALGPRVLDDASALEGFA
                     AYAGDTAMHARLAEIRRANKVALSNRIMDRLRIRTDPDAIFDVQVKRIHEYKRQLLNI
                     LETVALYESMKADPTRDWVPRVKIFGGKAAAGYHRAKLIIKLISDVAAVVNNDPTLRG
                     MLKVVFFPNYNVSRAEVIIPASDLSEQISTAGMEASGTGNMKLALNGALTIGTLDGAN
                     IEIRDRVGEENIFIFGLTAAEAQQRRSRGIDARESIAASLPLQRALDAIATGLFSPSE
                     PDRFRDIVDVLTYHDHFLVSSDFDSYAAAQQQVAEKWRDQAAWWRSSILNTAGVGWFS
                     SDRSIREYCDDIWNVKLSA"
BASE COUNT          888 a         1272 c         1244 g          734 t
ORIGIN      
        1 tacaacgtgg ccaggggagg tatcagcaaa gttgccgagg caggcatgcc atgcgacggc
       61 gttgcctctg ccagcacacc gccgaggttg ccaaggccgg agccgccata gtcagaggca
      121 tcggtattca gcatctcccg ccaacgtccg gcaaacggca gaccaacacg ataaccatga
      181 cgcggcaccg gcgtgaaatt acagatcaca gccaccggag gatcattggg aaagcctcgc
      241 cgcaaccaga cgaacaccga ctgactggca tcatcgacca cgatccagtg aaatccttcg
      301 ccctcgcagt cgcgcacatg cagcgcgggg ctgtcgcgat acgatctgtt gaggtcacgc
      361 acgcagcgca acaacccgag gtgcaacggg tcactcaaca aatcccattc aagttgagcg
      421 gcgaaattcc actccgtcag ctgaccaaac tcctggccca tgaacagtag cttcttgcct
      481 ggataggccc acataaatgc gtaataggcc cgtcccgtcg ccgcgcgctg ccaggcgtca
      541 cctgggatcc ggccgaggat cgagcgcttg ccgtgcacaa cctcgtcatg cgacagcggc
      601 aggacaaagt tctccgagaa cccataaagc aagccaaatg tcagcttgtt gtggtgccac
      661 tgccgatgcg ccggttcatg cccgatgtat tcaagtgtgt cgtgcatcca gcccatattc
      721 cacttgaagc cgagccaaga cctccggtgt cgaccggtcc cgacacggca ggccattcgg
      781 aggattcctc ggcgacggtc aatgtgcccg ggtaaagtcc atacgtaagt gtattaacct
      841 gacgcaggaa gccggccgca tcccagttct cgcgtccgcc ttgtgtattc ggcgtccatt
      901 cgccgggctg ccgcgaatag tcgaggtaaa tcatcgaggc gaccgcatcg acccgcaatc
      961 cgtcgatgtg aaaccgatcc agccaataca gagcactggc cgccagcaca ttcaccactt
     1021 ctcgccggcc ataatcgtag atcgccgtgt tccagtcggg atggaagccc ttttgggggt
     1081 cggcgtgctc gtaaagcggc gagccatcga aatgtgccaa cccgtgcacg tcggtgggaa
     1141 aatgcgcagg aacccaatca aggataatac ccagtcctgc cgcatgggcg cgatcgacca
     1201 gtcgagcaaa gccggcggga tcgccgaagc ggcgagttgg cgcgaacagg ccgatcggct
     1261 gatagcccca tgagtcgtcc aacggatgtt cggtgatcgg catcaactcg atatgagtga
     1321 agccaaggtc ggagacgtag ggaattagcg cgtcagcgat ctggtcatag gtcagaaacg
     1381 tgccgttctc gccgcggcgc catgacccga gatgcacctc gtagatcgcc atcggaaggt
     1441 gccgtgaatc tgttttgccg cgatcctgca tgaaggcagc atcggtccag ggaaaattat
     1501 ccgtgcgcgc aacgaccgag gcagtcgatg gccgcatctc ggcagcgaat ccgaacggat
     1561 cagccttcag cggttgcaac gtgccgtcgg cagcagagat ctcgaacttg tagaccgcgc
     1621 cttcgccgat tcccggagcg aagatttccc acaacccgga gtcgatccgt tttcgcatcg
     1681 gatgccggcg gccatcccag gcgttgaagt cacccacaac agaaacccgg cgcgcattcg
     1741 gtgcccagac cgcgaaatgc acacccgcga caccgtccag ggccatcggg tgggcaccga
     1801 ggcgttcata cagcctctga tgagtgccct cgaccaacag gtgatcgtcg agcgcaccaa
     1861 ggatgggccc gaagcgaaac ggatcgtcga actcccacgt gccaccggca tttgacgcaa
     1921 caaggcgata acggtccggt tcgctgtctg cgggaagccg aacctcaaag aaaccgtccg
     1981 gatggcggca gatcatctgc gcaatcacgg caccttccgg tccgcttacc gcgaccgaag
     2041 tggcgttggg cacgagcgcg cgaatgacca tgccggcagc cgttttatgc gggccgagca
     2101 ccgcaaacgg atcgccggga ctggcaccga cgatggccgc aatggcggcc ttggtcgctt
     2161 gccacctcgg cgcggcctta ccggtgcgcc caggtggctt cacgtcacgc ggacagcttc
     2221 acattccata tatcgtcgca atactcgcgg atcgaccggt ctgaggagaa ccatccgacg
     2281 cctgcggtat tgagaatgct cgaacgccac caggccgcct gatcccgcca cttttcagca
     2341 acctgttgct gcgcggcagc atacgagtcg aagtccgagg agacgaggaa atgatcgtgg
     2401 taggtcagca catccacgat gtcacggaac cgatccggct cggacgggga aaacaggcca
     2461 gtggcaatcg catcgagcgc gcgttgcagc ggaagcgacg ctgcaatgga ctcgcgggcg
     2521 tcgatgccac gcgaccgacg ctgctgcgcc tcggcggcgg tgagcccgaa aatgaaaata
     2581 ttctcttcgc cgacacggtc gcggatttcg atgttggcac cgtccagcgt gccaatcgtc
     2641 aaggcgccgt tcagcgccag cttcatattg ccggttcctg acgcctccat gcccgcggtc
     2701 gagatctgct cggaaagatc tgaggcagga atgatcacct cggcccggct gacgttgtag
     2761 ttggggaaga aaacaacttt caacatgccg cgcaacgtcg gatcgttgtt gaccaccgca
     2821 gcaacgtcac tgatgagctt gatgatcaat ttggcgcgat gatagccggc ggcagccttc
     2881 ccgccaaaaa tcttgacccg aggcacccag tcgcgggtcg ggtcggcttt catgctctca
     2941 tacaacgcca cggtttcgag gatattcagt aactggcgct tatattcgtg aatacgtttg
     3001 acctgaacat cgaagatggc atcaggatcg gtcctgatcc gcaagcggtc catgatccga
     3061 ttggacagtg ccactttgtt ggctcggcga atctccgcaa ggcgcgcgtg catggcggta
     3121 tcgcccgcat acgcggcgaa accttccagc gcggacgcat cgtccagaac tcgcgggcca
     3181 agcgcatcga ccaacgcact ggtgaggccg ggattggcct cgaaaagcca acggcggaag
     3241 gtgataccgt tggttttgtt aacaatccgg tctggataca acatgtgcat gtcgtggaac
     3301 acggtcgccc gcatcaggtt cgtgtgcagt tcggacacgc cgttgacacg atgggagccg
     3361 agaaacgcca tcgcacccat gcgaacctga cgcccgttat gctcgttaat caaggacacc
     3421 gatgaaagca gcgccgggtc ggtgtgtccg gcggcacgca ggccgtcgag atgcagcagg
     3481 ttggtgagga aaatgatttg catatggcgc ggcagcagcc gctccagcaa atgcaccggc
     3541 catgcctcca gcgcctccgg catcagcgta tggttggtgt aggagaacgt ggcggtggtg
     3601 atcgcccagg cttccttcca cgggatatcg tggacgtcga ccaacatgcg catcaattcg
     3661 gcgatggcga tcgcggggtg cgtatcgttg agctgaatcg cggcgaaatc cggcagtgtc
     3721 cgcaggtcgc cgtgctgatg gatgtgacga tacagcaggt cgtgcaacga ggcggcggag
     3781 aagaaatact cctgccgcag ccgcagctcc tgaccggccg gcgtgtcctc gctcgggtac
     3841 aacacctgtg agatcgcgtt ggcgcgggcg cgggccgcga gagcgccaac gtggtcaccc
     3901 tggttgaagg tgtccagccg cagcgggtcc ggtgcccgtg ccgaccacag gcgcaatgta
     3961 ttcacgtgcc ggccgcgcca gccgacgatc ggggtgtcgt aagcaatggc ctcaacggtt
     4021 tcggccggct cccagacatg atggtcggtg ccgtcggccc tggtctcccg tcgaaccgag
     4081 ccgccaaagc caatcatatg gctcacttcg ggccgttcaa actcccacgg attgccca
//
LOCUS       DATAVD010001650         7167 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1831529, whole genome shotgun sequence.
ACCESSION   DATAVD010001650 DATAVD010000000
VERSION     DATAVD010001650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7167
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1831529"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(57..425)
                     /locus_tag="VHX39_31720"
     CDS             complement(57..425)
                     /locus_tag="VHX39_31720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995759.1"
                     /translation="MSQSNYAASPEGSSEPRLLTWDDLDVVQGLLTEVAPSWSADLNH
                     ASIDDSTIVITPAGANDMIGPAFVLHRSRGRVQLDQFRWDEYRKLGAFRTFEEALAVL
                     RARLVPVTTLNQSLADQADR"
     gene            complement(599..1621)
                     /gene="holA"
                     /locus_tag="VHX39_31725"
     CDS             complement(599..1621)
                     /gene="holA"
                     /locus_tag="VHX39_31725"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEX3995760.1"
                     /translation="MKLAPARVEAFLREPGPCRVVLFFGEDAGMIRDRAAALVRTVAG
                     ALDDPFRVVELARDEIARLPDEAASLPMTGGRRVIRVREATDAAAAQIRTILKSNAPG
                     LVVLEAPGLATRSRLRTDLEAAPDGAAIGCYPEEGHALEATIRDTLKQAGVTIEADAL
                     SWLAGQLGADRAATRAELEKLALYAGAGGRVDLDAAMACIGDLSGLSLDDALFAATSG
                     DVATADRALELAIGEGAAPVQVLRAGIMHLQRLQRARLAMDETGLSATDATKAQRPPL
                     FYRRVAAFNRALALWSGAAVAAAINGLAEAERGCKRTGWPDQTLCRNAILVVARRAAA
                     TRTARG"
     gene            complement(1618..2145)
                     /locus_tag="VHX39_31730"
     CDS             complement(1618..2145)
                     /locus_tag="VHX39_31730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995761.1"
                     /translation="MPVPVGRRAALLLGLGGALSGCGFHPVYMATGDGPGASAGLAEI
                     DVKPISDRPGQILREALLGRLRIEPGTPRKFDLDVKFWITGEAEGILNFTEPTRLRMV
                     ANANWTLFSRDHPPKKLAEGGDNLVDGFDVFDSQYFAVDLANEAVQLRLAEAMAERIT
                     LRLAVWFHDHPTAIG"
     gene            complement(2169..4850)
                     /gene="leuS"
                     /locus_tag="VHX39_31735"
     CDS             complement(2169..4850)
                     /gene="leuS"
                     /locus_tag="VHX39_31735"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006558053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEX3995762.1"
                     /translation="MNDTSLTQPSATPDSGPRYDFAAAEPKWQQAWADRACFRVADVP
                     TDGKPKYYVLEMFPYPSGKIHMGHVRNYTLGDVVARYKRARGHSVMHPMGWDAFGLPA
                     ENAARERGIHPAKWTYENIANMRAELQRMGLSLDWAREFATCDPEYYGHQQKLFLDFF
                     RAGLVESKESWVNWDPVDGTVLANEQVIDGKGWRSGAPVEKKQLSQWFFSITKYAPDL
                     LSALDTMDRWPERVRLMQANWIGRSEGARLRFDLAAEPPGSGIASVEVYTTRPDTLYG
                     MSFLAIAPEHPLAAAVAARDPAAEKFIAECRSMGTSEAVIETAEKHGYDTGLRVKHPF
                     IEGATYPVWIANFVLMEYGTGAIFGCPGHDQRDLEFARKYGLDVVPVVLPPDADPATY
                     AIGKEAYVGPGMAFNSEFLNGLDVDAAKRAAIDALAAKGIGQGVTNWRLRDWGVSRQR
                     YWGCPIPIIHCDDCGVVPVPDDQLPVRLPDDVTFDRPGNPLDHHPTWKHVDCPLCRKP
                     ARRETDTCDTFVDSAWYFARFCCASATDRPLVRAAVDHWMPVDQYIGGIEHAILHLLY
                     ARFFTRGMRDTGQIGIAEPFAGLFTQGMVNHESYRSAEGPNGVWLYPEEVEKRPDGTV
                     VQKTTGEPVIVGRVEAMSKSRRNTIDPGDIIERYGADTARWFILSDNPPDRDMEWTEA
                     GAAGAYRFTQRIFRLAEAIRPDPGTQSGSTATKQSRPATFGQHGNTLRRVTHKTIAAV
                     TEALDSFAFNVAVARLYELANALTDAERAASSEAGLDWARCEAMEVLARLSAPMMPHL
                     AEEVMACLNPGDTTLVAERPWPEAEPELLIADSVTIAVQIMGKLRGTVAMPPDAPADA
                     VIAAAEAEPHVAQSLEGKRIVRRIHVPNRIVNFVIAG"
     gene            complement(4891..5361)
                     /locus_tag="VHX39_31740"
     CDS             complement(4891..5361)
                     /locus_tag="VHX39_31740"
                     /inference="COORDINATES: protein motif:HMM:NF013853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF29 domain-containing protein"
                     /protein_id="HEX3995763.1"
                     /translation="MYPPPMPDGLYERDVLAWSQHQADLLRRLGRGERVNDIDWAHVA
                     EEIEDVGLSELHSVESFLNLILVHVLKLHAWPESDARRHWRGEIVVFRNDAKRRFAPS
                     MRQRIDVGALYAEAHEQLREIDPTLQLPPANPFTLDDLLTQDTDTLLNRLPPPA"
     gene            5481..6941
                     /locus_tag="VHX39_31745"
     CDS             5481..6941
                     /locus_tag="VHX39_31745"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HEX3995764.1"
                     /translation="MDLAIDTTTQRLAFHARSQPDVRAITNGVTDCSYRQLATHVVRM
                     VNALTAIGVRRGQIVGVEAGDRFLHLLLLLACEAMGAATMSLTSFELVQPMDMGRFCD
                     HILATQTPAGADAGKIFILTQDWLIQVLRAPVTDDRFDALVQPPAPDSLVRLIKSSGT
                     TGMPKVMGTTYRAQQNMLRNSLWIAGDHLRSRADLLCLYHFSVRGCHTRAMLILQLGG
                     TIHLAATDAVRAMIMAGTVNYALFLPGDLDRLVRTAGLEGGPFPLHVDIIGGAVSPAL
                     RAAAALSLTDRIMVTYGSNEMQYVSVTGSDGVGRLVPGVQVMIVDDHGQAVPAGETGR
                     IQTRSDTMTDGYLGAPALTAAAFVDGWYNSNDLGFQPSPETLVVVGRADGMLNVGGVK
                     VPPGPVEDRIRAIDGVQDAMVTNVVNAQGIDVLLVAVETGSGDGVWGLEAAVNPIVQL
                     YASRYVLLPLPVFPRTETGKIRQEAVRAAYAAARDK"
BASE COUNT         1237 a         2227 c         2384 g         1319 t
ORIGIN      
        1 caggcaaaag cgcgttgtga tgatgtgtcc gaggctcatc gcacgacccc gccggatcag
       61 cgatcggcct ggtccgcaag cgattggttt aaggtcgtca ctggcacaag ccgtgctcgc
      121 agcaccgcca atgcttcttc gaacgtgcga aacgcgccca gtttgcggta ttcgtcccag
      181 cggaactgat ccagttgcac acgcccgcga ctgcgatgca gcacaaacgc cgggccgatc
      241 atatcgtttg ccccagccgg cgtaatcacg atcgttgagt cgtcgatgct ggcatgattg
      301 aggtccgcgg accaggatgg tgcgacctcc gtcagcaggc cctgcacgac gtccagatcg
      361 tcccacgtca acagcctggg ttcgctgctc ccttcgggag acgccgcata attcgattga
      421 gacatggccc gtcccttctt aatgggcacc aagtaccctt tggctgaaac tgcgtcgtaa
      481 tcaaaaatca cacttgaagg gcgcatcgcg gccctcaggt gaaaccaccc tgaaaccaat
      541 atcgcatgat atgactgaac cggaaagtgt tttttgtcag attttatcta attaaagact
      601 agccgcgcgc cgtccgcgtt gccgccgcac gccttgccac aacaaggatc gcattgcggc
      661 acagcgtctg atccggccat cccgtgcgtt tgcaaccccg ctccgcctca gccaggccat
      721 tgatcgcggc agcaacagcg gcacccgacc ataaggccag agcacggttg aaagccgcga
      781 cacggcggta gaacagcggc ggacgttgcg ccttggtcgc gtcggtcgca ctcaaaccgg
      841 tctcgtccat ggccaaacgc gcgcgttgca gccgctgcag atgcatgatg cccgcacgca
      901 gcacctggac cggcgctgcc ccttcgccaa tggccagttc cagcgcccgg tcggcggttg
      961 ccacatcgcc gctcgtcgca gcaaacaacg catcgtcgag cgacaggccg gagaggtcgc
     1021 cgatacaggc catcgccgcg tccaggtcga cccgtcctcc ggctccggca tacaaagcca
     1081 gcttttccag ttcggcccgc gtcgccgcac gatccgcacc aagctggccg gcgagccagg
     1141 acagcgcgtc cgcctcgatc gtcacgccgg cttgcttcaa ggtgtcgcgg atcgtggctt
     1201 cgagcgcgtg gccctcttcc gggtaacagc cgatggcggc cccgtccggt gccgcttcca
     1261 gatcggtgcg taaacgcgaa cgggtcgcaa ggcccggggc ttccagcacc accagcccag
     1321 gagcgttcga cttcaggatg gttctgatct gagcggcagc agcatccgtt gcctcacgca
     1381 cccgtatgac acgtcggcct ccggtcatcg gcaacgatgc ggcctcgtcc ggcagccgtg
     1441 cgatctcgtc gcgggccagt tccaccaccc ggaacggatc gtccaatgcg ccagcgacgg
     1501 tacggaccaa ggctgccgcg cggtctcgga tcatgccggc gtcctcgccg aaaaacagca
     1561 cgacccggca gggaccgggc tcacgcagaa acgcttccac ccgcgccggg gcgagcttca
     1621 tccaatcgcc gtgggatggt cgtggaacca aacggcgagg cggagtgtga tccgctcagc
     1681 catcgcctca gccagccgga gctgcaccgc ttcattggcc agatccacgg caaaatactg
     1741 cgagtcgaag acgtcgaagc cgtcaaccaa attgtcacca ccttcggcga gtttcttcgg
     1801 cggatggtcg cggctgaaca acgtccagtt cgcgttcgcc accatccgga gccgcgtggg
     1861 ctcggtgaaa ttgaggatgc cctccgcttc gccggttatc cagaatttaa cgtccagatc
     1921 gaacttgcgt ggggtgccgg gttcgatccg cagccgtccc aacagagcct cgcgcaggat
     1981 ctggccgggc cgatcgctga tcggcttgac gtcaatttca gcaaggcccg ccgaggcccc
     2041 gggaccgtcg ccggttgcca tgtagaccgg atgaaatcca caccccgaga gcgctccgcc
     2101 aaggccaagc agcagtgcgg cccggcggcc gacgggaacc ggcattggct cgcttgaggg
     2161 acggtgcctc atccggcaat cacgaagttg acgatgcggt tcggcacgtg gatacgcctg
     2221 acgatccgtt tcccttccag gctctgggct acgtgcggtt ctgcctcggc tgctgcaatc
     2281 actgcatccg cgggggcatc cggcggcatg gcaaccgtgc cacgcagctt gcccatgatt
     2341 tgcaccgcaa tcgtaacact gtcggcgatc aacagctcag gctcggcttc cggccatgga
     2401 cgttcggcaa ccagggtcgt gtctccaggg ttcagacagg ccatcacctc ctcggcgagg
     2461 tgcggcatca tcggggcact cagccgtgca agcacttcca tggcttcgca gcgtgcccaa
     2521 tcgagaccag cttcgctcga cgcggcgcgt tcggcgtcgg tcaacgcgtt ggcgagttcg
     2581 tagaggcggg cgaccgcaac gttgaacgcg aaactgtcca acgcctcagt cactgcggcg
     2641 atggttttgt gggtgacccg gcgcaaggtg ttgccgtgct ggccgaacgt ggcgggacgg
     2701 gactgtttcg tcgcggtgga cccggactgg gtgccaggat ctggcctgat cgcctcagca
     2761 agacggaaga tacgctgtgt gaagcggtaa gcgccggcgg cgcccgcttc ggtccactcc
     2821 atgtcacggt cgggcgggtt gtcggacagg atgaaccagc gcgccgtatc ggcaccgtag
     2881 cgttcgatga tgtcgccggg atcgatcgta ttgcgtctgg atttgctcat cgcctcgacg
     2941 cggccgacga tcaccggctc gccggtggtc ttctgcacca cagtgccgtc gggacgcttt
     3001 tccacttctt cggggtagag ccagacgccg ttcggcccct cggcggagcg gtaggattcg
     3061 tggttcacca tcccctgggt gaacaacccg gcgaagggtt ccgcgatgcc gatctggccg
     3121 gtgtcccgca tcccgcgggt aaagaaacgc gcgtagagca ggtgtagaat cgcatgctcg
     3181 atgccgccga tatattgatc gaccggcatc cagtgatcga ccgcggcccg caccagcggc
     3241 cgatcggtcg ccgaggcgca gcagaaccgg gcaaaatacc aggcgctgtc gacgaaggtg
     3301 tcgcaggtgt cggtttcccg ccgggccggc ttgcggcaca gcgggcaatc gacatgtttc
     3361 caggtcgggt gatggtcgag cggattgccc ggccggtcga acgtcacatc atcgggcaac
     3421 cgcaccggca actggtcgtc gggaaccggc accacgccgc agtcgtcgca gtggatgatc
     3481 ggaatcgggc agccccagta gcgttggcgc gacacacccc agtcgcgcag ccgccagttg
     3541 gtcacgccct gcccgattcc cttggccgcg agcgcgtcaa tggccgcgcg tttcgccgca
     3601 tcgacgtcca gcccgttaag gaactccgaa ttgaacgcca tgccgggacc gacataggcc
     3661 tccttaccga tcgcgtacgt cgccggatcg gcatcgggcg gcaacaccac gggaaccacg
     3721 tccaggccgt acttccgggc gaactccaga tctcgctggt cgtgcccggg acagccgaag
     3781 atcgctccgg tgccgtattc cataaggaca aaattggcga tccagaccgg gtaggtcgcg
     3841 ccctcgatga acgggtgctt tacccgcagg ccggtgtcgt agccgtgctt ttctgcggtc
     3901 tcgatcactg cctcgctggt gcccatgctg cggcattcgg caatgaattt ctccgctgcc
     3961 ggatcgcgcg cggcgaccgc ggcggcgagc ggatgctctg gcgcgatcgc cagaaacgac
     4021 ataccgtaaa gcgtgtccgg acgcgtggtg tagacttcga cacttgcgat accactgccc
     4081 ggtggctcgg ccgccaggtc gaaccgcagg cgcgcaccct cgctgcggcc gatccaattg
     4141 gcctgcatca gccgcacccg ttccggccag cggtccatgg tgtcgagcgc gctcagcaga
     4201 tccggcgcgt acttggtgat cgagaagaac cactggctga gttgcttctt ctccactggc
     4261 gcaccagagc gccagccttt gccgtcgatc acttgttcat tggccagcac ggtgccatcg
     4321 accggatccc agttgaccca gctttccttg ctctcaacga gaccggcacg gaagaagtcc
     4381 aggaacagct tctgctggtg gccgtaatat tccggatcgc aggtggcgaa ctcacgcgcc
     4441 cagtcgaggg agagacccat gcgctgcagt tcggcgcgca tgttggcgat gttctcgtag
     4501 gtccacttgg cggggtggat gccgcgttca cgggcggcgt tctcggcggg caggccgaag
     4561 gcgtcccagc ccatcgggtg catgacggag tggccgcggg cgcgcttgta gcgggcgacg
     4621 acgtcgccga gggtgtagtt gcggacgtgg cccatgtgga ttttccccga cgggtaggga
     4681 aacatctcca gcacgtagta tttcggcttg ccgtcagtgg ggacgtcggc gacgcggaag
     4741 caggcgcggt cggcccaggc ctgctgccat ttgggttcgg cggcggcgaa gtcgtagcgc
     4801 gggccggagt cgggggttgc cgagggctgg gttaggctgg tgtcgttcat ggggcgaatg
     4861 tatcgggcgc gggcgcgctg ggcgcaagta ttatgccggg ggtgggaggc ggttcagaag
     4921 ggtgtccgtg tcctgcgtca gcaagtcgtc gagggtgaag gggtttgccg gtggcagttg
     4981 aagcgtgggg tcgatttccc gcagttgctc gtgagcctcg gcatacagcg ccccgacatc
     5041 gatcctttgc ctcatcgaag gggcgaagcg gcgcttcgca tcgttccgga acacgacgat
     5101 ctcgccgcgc caatgccggc gggcgtcgct ttccggccac gcatgaagct tcaagacgtg
     5161 caccaggatc agattgagaa agctttctac agaatgaagt tcggatagac ccacgtcctc
     5221 gatctcctcg gcgacgtgag cccagtcgat gtcattcacc cgttccccgc gcccgaggcg
     5281 gcggagcagg tcggcctgat gctgggacca ggcgaggacg tcacgttcgt agagaccatc
     5341 cggcatgggg ggaggataca tgaaaaccgg ccatcatgcc agcaatcccg gccagcaatc
     5401 ccggccggtg ggcggggatg gcgaccgttg cgcttgcccg gcctcgcggc catgatgcga
     5461 tgactgattg gcgacgatga ttggatctgg ctatcgacac gaccacgcag cgtctggcgt
     5521 tccatgcgcg cagccaacca gatgttcggg cgatcaccaa cggggtcacc gactgctcct
     5581 accgccagct ggcgacccat gtggtgcgga tggtgaatgc gctgaccgcg atcggcgtgc
     5641 ggcgcggtca gatcgtgggg gttgaggccg gcgaccggtt cctgcatctg ctgctgctgc
     5701 tggcgtgcga ggcgatgggg gcggccacga tgtctctgac gtcgttcgaa ctcgtgcagc
     5761 cgatggatat ggggcggttt tgcgaccaca tcctggcgac gcagacgccg gccggcgccg
     5821 atgccggcaa gattttcatt ttgacgcagg actggttgat ccaggtcctg cgggcgccgg
     5881 tgacggacga ccggttcgat gcgttggtgc aaccccctgc cccggacagc ctggtgcggc
     5941 tgatcaagtc gtccggcacg accggcatgc cgaaggtgat gggaaccacg tatcgtgcgc
     6001 aacagaacat gttgcgaaac agtctgtgga tcgcggggga tcatctgcgg tcgcgggcgg
     6061 acttgctgtg cctgtatcat ttctcggttc gcggctgcca tacgcgggcg atgctgatat
     6121 tgcagcttgg cggaacgatc catctcgcgg cgacggatgc tgtcagggcg atgatcatgg
     6181 cgggcaccgt caattatgcg ttgttcctgc ccggcgatct cgatcggctt gtgcgtaccg
     6241 ccgggctgga gggggggccg ttcccgttgc atgtggatat catcggcggt gcggtgtccc
     6301 ctgccctgcg ggccgcggcc gccctatcgt taacggatcg tatcatggtg acgtatggat
     6361 ccaacgagat gcaatacgtc tcggtcaccg gctcggacgg ggtcggcagg ctggttccgg
     6421 gcgtgcaggt catgattgtc gacgaccatg ggcaggcggt gccggcgggg gaaaccggcc
     6481 ggatacagac ccggtccgat acgatgacgg atgggtatct cggtgcgccg gcgttgaccg
     6541 ctgcggcgtt tgtggatggt tggtacaaca gcaacgatct ggggtttcag ccgtcgcccg
     6601 aaacgctggt ggtggtgggc cgagcggacg ggatgttgaa cgtgggtggg gtgaaggtgc
     6661 cgccggggcc ggtggaggat cggatacggg cgatcgacgg cgtgcaggac gcgatggtaa
     6721 cgaatgtcgt caacgcccag gggatcgatg tgctgttggt tgcggttgaa accggttcgg
     6781 gcgacggagt ctgggggctg gaggcggcgg tcaatccgat cgtccagctt tatgcctcgc
     6841 ggtatgttct gttgccgctg ccggtgtttc cgcggacgga gacggggaaa atacgccagg
     6901 aggccgtgcg ggcggcttat gccgccgctc gggacaaatg agggatccag aggttcagct
     6961 cagacggata gtgcgtccag tttgaactgc caggggtccg aggcgggata atcggttcat
     7021 cgagcacagg gtatcggcgt ctcgttgtca tggcggcgcg gggccgccgc gcccgcccgt
     7081 gccggtctcg gacaaggcat ggatggcggg cctgcgcccg ccatgacggt gtcaggcagc
     7141 cgtgcttccc ctgccgcagt tattccg
//
LOCUS       DATAVD010001651         1595 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_529796, whole genome shotgun sequence.
ACCESSION   DATAVD010001651 DATAVD010000000
VERSION     DATAVD010001651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1595
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_529796"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(239..1165)
                     /locus_tag="VHX39_31750"
     CDS             complement(239..1165)
                     /locus_tag="VHX39_31750"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX3995765.1"
                     /translation="MKQTILISGAVLIAVGVGIAQGPAGDPAAGQANGAKGTGARGPN
                     AKGQAKGKGAPRNPAQSPAARPGPRTVTPQTYPAAQIRAGEGRFTSECGFCHGRDATG
                     GETGPDLTRSELVAEDVRGDKIGPLLRKGRPDQGMPAFDISNADVGAIVAFVHDLKTK
                     SEALGGGRQSVAASDLATGNAADGRSYFNAAGGCSGCHTPTGDLAGIATRYNGLALLQ
                     RMLYPTAGRPTPARPNVTVTLASGETVAGPLASEDEFTVVVTDAAGTRKSYEKSAVKY
                     KIDDPMSAHFDLLGKYTDADMHNVYAYLDTLK"
     gene            complement(1258..>1595)
                     /locus_tag="VHX39_31755"
     CDS             complement(1258..>1595)
                     /locus_tag="VHX39_31755"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3995766.1"
                     /translation="STLGNGDIRRVRIGTSAHCLTETRTVYGRTLTPGSYTKLTISDS
                     GITLDAEAKAQLFEPLYLDRSAVGVELSPVYGMVHSLRGGIDVISNANEGTSFEIWLP
                     SANSAPSRN"
BASE COUNT          261 a          526 c          491 g          317 t
ORIGIN      
        1 aggatcggcg aggccttgat ctgctgctgt ccggtttgga aatgccacag ttcctggagc
       61 gagccgacgt tgtccggcgt gatcgctgtc agggcggaat gccggcggcc ggagtagtcg
      121 ccgtgaaacg tcaaccagct atcggcggac gggtgcagca tcttgttcgc atccacacct
      181 tgagccgagg ccagcactgc cgccgccaag cccccgctga gaatccatga gtgtcgcatt
      241 actttaatgt gtccaggtag gcgtaaacgt tgtgcatgtc ggcgtcggta tactttccca
      301 atagatcgaa gtgggccgac atcggatcgt cgatcttgta cttcacggcg gatttttcgt
      361 agctcttgcg ggtgcccgcg gcatcggtaa ccaccaccgt aaactcgtct tcgctggcca
      421 gcggcccagc cacggtttcg cccgaggcaa gcgtcacggt gacgttcggc cgtgccggcg
      481 tgggtcgccc ggcggtggga tacagcatgc gctgcagtaa cgccagcccg ttataacgag
      541 tggcgatgcc cgccagatcc ccggtcggcg tatggcagcc ggagcaaccg cccgccgcgt
      601 tgaaataact tcggccgtcg gccgcgttgc ccgttgccag atccgaagcg gccacgctct
      661 gccgtccacc gcccagcgct tcggacttgg tcttcagatc atgcacgaac gcgacgatgg
      721 cgcccacatc cgcgttgctg atatcgaagg cgggcatacc ctgatcgggc cgccctttgc
      781 gcagcagcgg tccaatttta tcgccgcgca catcctcggc gacaagttcc gatcgtgtca
      841 gatcaggtcc ggtttcgcct ccggtggcat cgcggccgtg gcagaagccg cattccgagg
      901 tgaagcgtcc ttcgccggct cgaatctgcg ctgccggata cgtctgcggt gtaaccgtcc
      961 gcggaccggg ccgcgccgcc gggctctgcg ccgggttgcg cggagcgcct ttacctttcg
     1021 cctgaccctt ggcgttcggt cccctcgccc ccgtcccttt tgcgccgttc gcctggcctg
     1081 cggccggatc gcccgcgggt ccctgcgcga tcccgacgcc tacggcaatc aggacggctc
     1141 cggaaattaa gatggtttgt ttcatcctct cagcaatact ggcgaaatcc gcgccggaat
     1201 gcaactcgtg cgcttctccg cgccggcacc cgccacgcgg cgccgtcgac taagcggtta
     1261 gttccggctg ggcgcggaat tcgccgacgg gagccatatt tcgaacgacg tgccttcgtt
     1321 cgcgttgctg atcacgtcga tgcctccgcg caggctgtgc accatgccgt agaccggaga
     1381 aagttccaca cccaccgcgg agcgatccag atacagcggc tcaaataact gcgccttggc
     1441 ttcggcatcc agcgtaatac ccgagtccga aatggtgagc ttggtgtaac tgccgggcgt
     1501 cagtgtccgg ccgtaaaccg tccgggtttc ggtgaggcaa tgcgcactgg tgccgatccg
     1561 cacccggcga atatccccat ttcccagggt cgagg
//
LOCUS       DATAVD010001652         8604 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3696747, whole genome shotgun sequence.
ACCESSION   DATAVD010001652 DATAVD010000000
VERSION     DATAVD010001652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8604
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3696747"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..584)
                     /locus_tag="VHX39_31760"
     CDS             complement(<1..584)
                     /locus_tag="VHX39_31760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine methyltransferase"
                     /protein_id="HEX3995767.1"
                     /translation="MPYPTHLLPTTVVGSYPQPAWLVDGVALKQVGVPRVHAHGIWRV
                     PEALLEQAQDDGTILAIREMERAGIDIVTDGEIRRESYSNRFALALEGVDADHPGEVR
                     SQAGRGTPVPRVVGKIKRSGPVELRDTEFLLQNATHATKITLPGPFTLTQQARNEFYQ
                     DEAELAMDYAVAVNEELHALKASGVDVIQLDEPWV"
     gene            711..1604
                     /locus_tag="VHX39_31765"
     CDS             711..1604
                     /locus_tag="VHX39_31765"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HEX3995768.1"
                     /translation="MWPIRSALFVPAHRREWVAKAIRVSPGAAVLDIEDSVPPEFKTQ
                     AMEYLKSEIAELKAAKVGAFVRINPLHERTADEIAAAMTEGLTAIVLPKAQTATEIRR
                     VHDLLSYYEGGAGLPHGTVGILPLPETAEGMHDARALAAASDRVRGIHGALSGPVSGD
                     FARAFGFRATSDGIEQLYLASKLILDSRAAGAMYPIAGIFGTPMDDLAATERLIRRAR
                     DIGYTGVAVMHPSHVAIANAVFRPTAEEVAYFQGLLKAFEDAEKAGLGAVKYQGAMVD
                     YAMLPQAREVLAEASRFNGST"
     gene            complement(1791..2822)
                     /locus_tag="VHX39_31770"
     CDS             complement(1791..2822)
                     /locus_tag="VHX39_31770"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3995769.1"
                     /translation="MHKILAMTMIIELNLYINMVGNIFFSLRRVSKSGPLPDFRGHRL
                     RCISCYDPCPNSERRRRKPAMDVAITKLTEHTGAEVRGIDLSAGVDSETNERLNQAFV
                     DRSVLVIRDQTLSPQQLLDTVHLFGDVFPQHNTRFALPDCPQIHFISNQDKFPDGRRY
                     IPGEGWHTDHSNDVRPPKATVLHAVSLPSRGGDTQFANMAAAYDALPAALSERLRGLT
                     AIHVYQSSHSARQLMALPDTAKERVPNAVLHPIVRTHPQSGRRSIYINPIRIEGILGL
                     DHKEALPLLDELLAFATAPRFEYRHKWAPGDLVMWDNRCVLHKANGDYDMNEVRYLYR
                     VMLKGSVPV"
     gene            complement(3211..3675)
                     /locus_tag="VHX39_31775"
     CDS             complement(3211..3675)
                     /locus_tag="VHX39_31775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HEX3995770.1"
                     /translation="MAKISVQTEDFDVAAEIACLTHGRTDIGGLGCFIGVVREDKVQG
                     GAERVLQALTLEHYPAMTVRAIGRITDEAERRWGLLGCTVIHRVGRMRPGENIVLVLA
                     AAAHRQAALDATAFLIDWLKTKAPFWKREEFQDGEGEWVEARDADDAAASRW"
     gene            complement(3791..4054)
                     /gene="moaD"
                     /locus_tag="VHX39_31780"
     CDS             complement(3791..4054)
                     /gene="moaD"
                     /locus_tag="VHX39_31780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin converting factor subunit 1"
                     /protein_id="HEX3995771.1"
                     /translation="MPAALSVLYFAWLRERVGVSEETLSPPESVVTVADLILYLANLD
                     QRHAAAFKDRKTVRCAVNQEFADPATVLRPGDEVAFFPPVTGG"
     gene            complement(4072..4542)
                     /locus_tag="VHX39_31785"
     CDS             complement(4072..4542)
                     /locus_tag="VHX39_31785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995772.1"
                     /translation="MRRIALVSLTMLSGCGFHTWWNPPFTTGYSPNTPETASVNMRRV
                     KGGDVAVTPLSTQPGDIWPGPLPPPTTLQDLEKQGQTGVEAPVKGSPLNRSGSSLTAP
                     LPSGTPGTPQGGTSTGSATGPGQPPDQRIIVPNGNGTSTVIYPDGRIETIPTPK"
     gene            complement(4615..5124)
                     /gene="mobB"
                     /locus_tag="VHX39_31790"
     CDS             complement(4615..5124)
                     /gene="mobB"
                     /locus_tag="VHX39_31790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HEX3995773.1"
                     /translation="MKVLGIVGWSGSGKTTLLVAVLPLLRAAGLAVSTIKHTHHAFDM
                     DQPGKDSYRHRLAGAHEVLIASSRRWALLHEVEGEEPTLPELLAHMAPVDLVLVEGFK
                     SHPYPKLEVFRPALGKPSLWDREPEVVAVASDSTPDIGKRTLLPLNQPETIAAWIRTQ
                     VVTDIAPGS"
     gene            complement(5167..5787)
                     /gene="pgsA"
                     /locus_tag="VHX39_31795"
     CDS             complement(5167..5787)
                     /gene="pgsA"
                     /locus_tag="VHX39_31795"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEX3995774.1"
                     /translation="MLTDLPNLLTLSRIAAIPLLVGLVALGHPVTDLIACIVFTAAAI
                     TDYFDGMLARSLRQQSDLGRMLDPIADKLLVGAVLMMLVGLGRLSSLALYPAIVIMLR
                     EILVSGLREYLAGIRIGLPVTSLAKWKTGFQMGALGTLLAGDSSAHLLHLGIVPVSAI
                     GEAMLWVAAVLTLVTGWDYLMAGLHHASTPKTPDAQVREPLSRPPV"
     gene            complement(5874..6836)
                     /gene="secF"
                     /locus_tag="VHX39_31800"
     CDS             complement(5874..6836)
                     /gene="secF"
                     /locus_tag="VHX39_31800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEX3995775.1"
                     /translation="MFIKPRMRLAPDNTTFRFMNGRFAGLIVSAVLSTASIILFFTPG
                     LNLGIDFSGGIVMEVRTDGPADFPKLRAALAEQHVPDQGLQRFGDDSTVLIRLPTQPT
                     EAGTEVAVGKVRTALEQSIAGVKIVRVDAVGASVSSELFRNGLYALGISLLMILAYIW
                     FRFEWQFAVGAVVTLILDVTKAIGFLALTRIEFDLVMVAAILTILGYSTNDKVVVYDR
                     VRENLRKYKTMPLRDLIDLSINETLNRTLGTSATVFLASLPLALFGGTSISGFAWVML
                     FGIVVGTSSSIFIAAPILLLLGEKRLRRDTVAVEGPEPGAARQP"
     gene            complement(6846..8420)
                     /gene="secD"
                     /locus_tag="VHX39_31805"
     CDS             complement(6846..8420)
                     /gene="secD"
                     /locus_tag="VHX39_31805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007399331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEX3995776.1"
                     /translation="MMYFSRLKAAAILGVCLLGLLVSLPNVLPAPASWMPWRTVHLGL
                     DLKGGSYLLMEVDMKAVIKERLDGLLDAARQALRPGGIFYQTLEAQPEQNRILLRLRD
                     PAKTDAAMAALAPLVQRDGPNNAPDMNIVSTPDGSITLTLSPVALSARAAGAVQQSIE
                     IVRRRIDETGVVDPQITRQGDSRIVVQLPGIEDPNRIKELLGKTAHMTFRLVDETASE
                     AAGAQPPPGVEFLPMQDGGGKIAVRKRVDVDGADLTDAHAGTNGQTGEWVVNFKFNSN
                     GSRRFADITRANVGHRFAVVLDDKVITAPVIREPITAGSGQISGNFTAASANDLAVLL
                     RAGALPAPLTVVEERTIGPELGADSIRAGAISLLAGFLFVIAFMAFFYGLFGWFANLC
                     LVVNLILMLALMSLLEATLTLPGMAGILLTLGMAVDANILINERIREEQRRGRPPLAA
                     LEHGFQRAYSTIFDSNAATFLSHVMLFVFGSGPVKGFAVTITIGIATSLFTAWMLTRL
                     LVARWYVAVRPRLLPV"
BASE COUNT         1765 a         2674 c         2596 g         1569 t
ORIGIN      
        1 acccagggct cgtcaagctg tatgacatcg acccctgacg ccttcagcgc gtgcaattcc
       61 tcgttcacgg cgaccgcgta atccatcgcc agctcggcct cgtcctgata gaactcgttg
      121 cgcgcctgtt gcgtcagagt gaatgggcca ggcagcgtga tcttggtggc gtgcgtggcg
      181 ttctgcagca ggaattcggt atcccgcagt tccaccggcc cgcttcgctt tatcttcccc
      241 accaccctgg gcaccggtgt gccacggccg gcctgtgagc gaacctcgcc cggatggtcg
      301 gcatcgaccc cctccagcgc cagcgcgaag cgattggagt agctctcgcg gcggatctcg
      361 ccatccgtca cgatatcgat gccagcccgt tccatctcgc ggatcgccag aatggtgccg
      421 tcgtcctgtg cctgctccag cagcgcctcc ggcacccgcc aaatgccatg cgcatgcacc
      481 ctgggcacgc cgacctgctt caatgcgacg ccatcgacca gccaggccgg ctgcggataa
      541 ctgccaacca cagtcgtggg cagcaaatgt gtgggatagg gcatcggttt cctcctggcc
      601 cggccggtca gccgatcacc gcaacaatga cctgagatgg gggagacgca agcgggcgct
      661 gttaatgtta tggatggctc gcaaccgtca tcgatcggga gagacgtccc atgtggccta
      721 tccgttctgc gttattcgtg cccgcgcatc gccgcgaatg ggttgccaag gcgatccggg
      781 tttcacccgg cgccgccgta ctggacattg aagattccgt gccgcccgag ttcaaaaccc
      841 aggcgatgga atatttaaag agtgagatcg cggaactaaa ggcagcaaag gtcggcgcgt
      901 tcgttcggat caatccgctg catgaacgaa ccgccgacga gatcgccgcg gcaatgaccg
      961 aaggcctgac tgcgatcgtc ctgccaaaag cacagacggc gactgagatt cgccgcgttc
     1021 acgatttgtt gagttattac gaaggcggcg ccggcctgcc gcacggcaca gtcggtatcc
     1081 tgccgctgcc cgaaactgcc gaggggatgc acgacgcccg cgcattggca gcggcgagcg
     1141 atcgggtgcg tggcatccac ggagcgctca gcggcccggt ctcgggcgac tttgcgcgcg
     1201 ccttcgggtt tcgcgcgacc tcggacggga tcgaacaact gtatctggcg tcaaagctga
     1261 tcctcgacag ccgggcggcc ggggcgatgt atcccatcgc cggcattttc ggcaccccaa
     1321 tggacgacct cgctgccacc gagcgactga taaggcgagc ccgcgacatc ggctacaccg
     1381 gggtggcggt gatgcatcca tcgcacgttg caatcgccaa tgccgtgttc cgacccactg
     1441 ctgaagaggt cgcgtatttc cagggcctgt taaaggcatt tgaggatgcc gagaaggccg
     1501 gcctcggagc ggttaagtat cagggagcga tggtcgatta cgcgatgctg ccacaggcgc
     1561 gcgaggtgct ggccgaagca agccgtttca atggctcaac gtagcagatt tacaacgtaa
     1621 agtaacaatc gcgtgccgac gtcgcgttcc tccgcggtat cggctcatac ctgccggtta
     1681 ctatcttaag tcatatcgtg ccggagaagc ccggccatga tgctgtcggg ctcggcggtt
     1741 gggcccgaag cgcgccggca taacgccgta tcgcaagcca tcggggccaa tcaaaccggg
     1801 acgctgccct tcagcatcac cctatataag taacgcacct cgttcatatc gtagtcgcca
     1861 ttcgccttat gtaacacgca gcggttgtcc cacatcacca gatcgccagg cgcccatttg
     1921 tgccggtact caaagcgtgg cgcggtcgca aacgccagca attcgtccaa taacggcagc
     1981 gcctctttat gatcgagccc gagaataccc tcgatccgga tcgggttgat ataaatcgag
     2041 cggcggcccg actgcggatg ggtgcgaacg atcggatgca ggactgcgtt tggcacccgc
     2101 tccttcgcag tgtccggcag cgccatcagt tgcctcgcac tatgactgct ttgataaacg
     2161 tggatggctg tcaggccacg cagacgctcg ctgagtgccg cgggcaacgc atcgtatgcg
     2221 gccgccatgt tggcaaactg agtgtccccg ccgcggctgg gtaacgagac tgcgtgcaga
     2281 accgttgctt tggggggacg aacgtcgttg gaatgatcgg tgtgccaacc ctcaccgggg
     2341 atatagcggc gaccatcggg gaacttgtcc tggttcgaga taaaatgaat ttgcgggcaa
     2401 tccggcaaag caaatcgcgt attgtgttgc ggaaatacat caccaaataa gtgaactgtg
     2461 tcgagcagct gctgcggcga gagtgtttga tcacgtatca ccagcacact tcgatccacg
     2521 aacgcctgat tgagccgctc gtttgtttct gaatcgaccc cggcggacag gtcgataccg
     2581 cgtacttcgg cgccggtgtg ttcagtgagt tttgtgatgg caacgtccat ggccggcttc
     2641 ctccgtctgc gctcgctgtt tggacacgga tcgtagcatg agatgcagcg aaggcgatgc
     2701 ccacgaaaat ctggcagggg tccgcttttg gagacacgcc gcaggctgaa aaaaatatta
     2761 ccaaccatgt tgatatacaa attaagttca attatcatgg tcatggctaa aatcttgtgc
     2821 aacagacctc gaacccacct cacctcgaac agaccgcctg aattcggtat ttagggaatg
     2881 gaagcgggtt tcaaacacaa ggagtaacga ctttggctcg gacaaaaagt ttaagtaagc
     2941 agatccgcca ggcgcgggaa ggcaagggtt ttacggtcgc cgaactcgcg gatcgtttag
     3001 gcgtctcgca ggtgtcgatt tattattggg aaagtggccg ggttcgtccg cgcgatacga
     3061 atctcgctgc attgtgcaaa gctctaaaaa tgcccgtccg ggagaccatg gcactcacag
     3121 gtcgataacc gggacctcaa tacaacgtcc ggttaggtgt atttaagcga taagttaccg
     3181 atgcaaccgc cgagagcggg gggggagtgc ctaccaacga gaagccgcgg cgtcatcggc
     3241 gtcgcgggct tcaacccact caccttcgcc atcctgaaac tcctctcgtt tccagaatgg
     3301 cgccttggtc ttgagccaat cgatgagaaa cgctgtcgca tcgagcgctg cctgacggtg
     3361 cgcggctgcg gccagaacca gaacaatatt ttcgccaggg cgcatccggc ccacgcggtg
     3421 gatgacggtg catccaagca aaccccagcg acgctctgcc tcgtcggtga tgcggccgat
     3481 ggcacgtacg gtcatcgccg gataatgctc gagtgtcagc gcctgtagca cgcgctctgc
     3541 gccgccctgg accttgtcct cgcgcacgac gcctatgaag catcccagtc cgccgatgtc
     3601 ggtccgaccg tgcgtcaggc aggcgatttc agcggcaaca tcgaaatctt cagtctgaac
     3661 ggagatcttg gccatcgcgg ttgggtgccc ttcgcagttg ctcagcacag cattgcggag
     3721 cggaccaagg cgccggttcg tagcgtcccc ggttcaacag acggtccacc ccgatgtcgg
     3781 cccggagcgc ctaacccccg gtgaccggcg gaaagaacgc cacctcgtcc ccggggcgca
     3841 aaaccgttgc gggatcggcg aactcctggt tcaccgcgca gcgcaccgtc ttgcggtcct
     3901 tgaacgccgc ggcatgacgt tggtcgaggt tcgccagata caagatcagg tcggccacag
     3961 tcaccacaga ctccggtgga gagagcgtct cttccgacac accaacccgc tcccgcagcc
     4021 aggcaaaata caagacggac agcgctgccg gcatggaaac gcgcgcctcc gtcactttgg
     4081 cgtcggaatg gtttcgatgc gcccgtcggg ataaatcaca gtactggtac cgttgccatt
     4141 tggcacgatg atccgctgat ccggcggctg acctgggcca gtggcactgc ccgtcgaggt
     4201 gccaccttgc ggcgtaccgg gtgtgccact gggaagcggc gccgtcagcg aggaacccga
     4261 gcgattgagc ggcgaaccct tgaccggcgc ctccacaccg gtctgcccct gcttctcaag
     4321 gtcctgcaag gtcgttggcg gcggcagcgg accgggccaa atatcgcccg gctgggttga
     4381 cagcggagtg accgcaacgt ccccgccttt gacccggcgc atgttcacgc tggcggtctc
     4441 cggcgtattc gggctgtagc cggtggtgaa cggcgggttc caccatgtgt ggaagccgca
     4501 gccactgagc atcgtcaggc ttaccagggc gatacgccgc atcagagcag gctccaaaaa
     4561 aacacgcggg acattcgagt gcgggcggga ctttgccttc aattcaacgt cttctcaaga
     4621 acctggcgca atatcggtaa cgacttgggt tcgtatccag gctgcaatcg tctccggctg
     4681 gttcaatggt agcagagttc gcttccctat atcaggggta gaatcacttg caactgccac
     4741 tacctcaggt tcgcgatccc atagcgacgg cttgcccaac gccggacgaa acacctccag
     4801 cttggggtag ggatgcgatt tgaagccctc gaccaggacg agatccaccg gcgccatatg
     4861 cgccagcagt tcgggcagag ttggttcctc tccttcgacc tcatgcagca aggcccagcg
     4921 gcgggacgag gcgatgagca cttcatgggc gccggcgagg cggtggcgat agctgtcctt
     4981 gccaggctga tccatatcga aggcgtgatg agtgtgcttg atggtggaaa ccgccagacc
     5041 ggccgcccgt aacaacggta gaaccgcgac gagcagcgtg gtcttcccgc tgccggacca
     5101 tccgacaatg cccaatactt tcaaaccccc tggactttca attcctggac tttcaacctc
     5161 cggtcttcaa acgggcggcc gcgacaatgg ctcgcgcact tgcgcgtccg gcgtcttcgg
     5221 cgtcgacgcg tgatgcaaac ccgccatcag atagtcccac ccggtcacca acgtcagcac
     5281 agccgcgacc cacagcattg cctcgccaat cgccgagacc ggaacaatcc cgagatgcag
     5341 caaatgcgct gaactgtcgc ccgccagcaa cgtacccaga gcgcccatct gaaacccggt
     5401 tttccatttg gcgaggctgg tgaccgggag gccgatccgg atcccggcca gatactcccg
     5461 cagcccgctg accagtattt cccgcagcat aataacaatg gccggataca gcgcgaggct
     5521 cgacagccgg cccagaccca ccagcatcat caacacggcg cccaccagca gcttgtcggc
     5581 gatcgggtcg agcatccggc ccagatcgga ttgttgccgg agcgaacgtg ccaacatccc
     5641 atcgaaataa tccgtgatgg cggcggcagt gaacacgatg caggcgatca ggtcggttac
     5701 cggatggccc aatgcgacca gaccgaccag caagggtatt gcggcgatcc gcgacagcgt
     5761 cagcagattg ggcaggtcgg ttagcatgtc acgctgaatt taccccaatc gcccgtccac
     5821 ggaaatcgcc aatcccgtta aaccggaggc gattgcgtga acatggaagg cattcagggc
     5881 tgacgcgcgg cacctggctc gggtccctcg accgccaccg tgtcacgccg cagccgcttc
     5941 tcgccaagca gcaaaaggat tggcgcggcg ataaaaatag acgacgacgt gccgaccacg
     6001 atcccgaaca gcatgaccca ggcaaagccg gaaatcgacg tgccgccaaa caacgcgagc
     6061 ggcaggctgg cgaggaacac tgtcgccgag gtacccaagg tgcggttcag ggtctcgttg
     6121 atcgacagat cgatcaggtc gcgcaacggc atggtcttat atttacgcag attttcccga
     6181 acccggtcat acaccaccac cttatcattg gtggaataac cgaggatcgt caggatcgcc
     6241 gcaaccatca ccagatcgaa ctcgatccgc gtgagcgcca ggaagccgat cgccttggta
     6301 acgtccagga tcaatgtcac caccgcgccg acggcaaact gccattcgaa ccggaaccag
     6361 atataggcca gaatcatcag taaactgata ccgagtgcgt acaggccgtt acggaacagc
     6421 tctgacgaaa cgctggcgcc aaccgcgtcg acgcggacaa tcttcacgcc ggcgatcgat
     6481 tgttccagcg ccgtgcgaac cttgcctacg gcgacttcgg tcccggcttc ggtgggctgg
     6541 gttggcaacc ggatgagcac agtcgaatca tcgccaaatc gttgcaggcc ttgatccggc
     6601 acatgctgct cggccagagc ggcgcggagt ttcggaaaat cggcggggcc gtcggtccgc
     6661 acctccatga cgatcccacc ggaaaagtcg atgcccaggt tgaggccggg cgtgaagaac
     6721 aaaatgatcg acgcggtcga cagcaccgcg gaaacgatga ggccggcgaa ccgcccgttc
     6781 atgaaccgga acgtcgtgtt atccggggcg agacgcattc tgggtttgat gaacatgatg
     6841 cgccctcaga ccggcagcag ccgggggcga accgccacat accagcgagc caccagcaac
     6901 cttgtcagca tccaggccgt aaacagcgac gtcgcaatgc cgatcgtaat ggtcacggcg
     6961 aaccccttga ccggtcccga cccgaacacg aacaacatca cgtgcgacag aaacgtcgct
     7021 gcattggaat cgaagatcgt cgaataagcc cgttggaacc catgctcgag tgcggcgaga
     7081 ggcggccgtc cgcgccgctg ctcctcgcgg atgcgttcgt tgatcaggat gttggcatcg
     7141 accgccatgc cgagggtcag caagataccg gccatgccgg gcaacgtcag tgtcgcctcc
     7201 agcagcgaca tcaacgccag catcaggatc aggttcacca cgaggcagag attggcgaac
     7261 cagccgaaca gcccatagaa gaacgccata aacgcgatga cgaacaagaa gccggccagc
     7321 agggaaatcg ctccggcgcg aatactgtcg gcgcccagct cggggccaat ggtgcgttct
     7381 tcgacgacgg tcagtggcgc gggcagcgcg ccggcccgca acagcaccgc gaggtcattg
     7441 gcactggccg cagtgaaatt gccgctgatt tgtccggaac cggcagtgat cggctcgcgg
     7501 atcaccggcg cggtgatcac tttatcatcc agcacgaccg caaagcgatg accgacgttg
     7561 gcgcgggtga tgtcggcgaa ccggcgggag ccgttggagt tgaatttgaa gttcaccacc
     7621 cactcgccgg tctggccgtt ggtgccggca tgggcgtcgg tcaggtcggc gccatcgaca
     7681 tcgacgcgct tgcggacggc gatcttgccg ccgccgtcct gcatcggcag gaactccacg
     7741 ccaggaggcg gctgagcgcc agcagcctcg ctggccgtct catccacgag acgaaacgtc
     7801 atgtgcgcgg tcttgccgag caattcctta atgcgattgg gatcctcgat gccggggagc
     7861 tgcacgacga ttcggctgtc gccttgcctg gtgatctgcg gatcgacgac gccggtttca
     7921 tcgatccggc ggcggacgat ctcgatcgat tgctgcaccg ccccggcggc acgggcactg
     7981 agcgcaaccg gcgacagggt caacgtgatc gagccgtccg gcgtgctcac gatattcata
     8041 tcgggcgcat tgtttggccc gtcgcgctgc accagtggcg ccagtgctgc cattgccgcg
     8101 tcggtcttcg cggggtcgcg cagccgcagc agaatgcggt tttgctccgg ctgggcttcc
     8161 agggtctgat agaaaatccc ccccggccgc agtgcctgac gggcggcatc gagcaggcca
     8221 tccagtcgct ccttgatcac cgccttcatg tcgacctcca tcagcagata gctgccgcct
     8281 ttgaggtcga ggccgagatg cacggtgcgc cacggcatcc aggatgccgg cgcaggaagc
     8341 acattgggca ggctgaccag cagcccgagc aaacagacgc cgaggatggc ggcggccttc
     8401 aagcggctga aatacatcat ggtcttgtgt gatgggctcc gattgaccgg cgcccctatg
     8461 cgccacgcgg ttcaaggttg tccagaggga ggccagtcgc ctggtttgcc cggtctggtc
     8521 aggctatgcc gggcctcgta gcgggttgtg ctttctggtc gcaatgctcg cctggtgacg
     8581 ccgtcctggg atcagacgcc cgcc
//
LOCUS       DATAVD010001653         1843 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3132602, whole genome shotgun sequence.
ACCESSION   DATAVD010001653 DATAVD010000000
VERSION     DATAVD010001653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3132602"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /locus_tag="VHX39_31810"
     CDS             <1..430
                     /locus_tag="VHX39_31810"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3995777.1"
                     /translation="TPPGSTHLWEDREKIVRDANSLLPLADVTVERWLTDEMKTRNPN
                     RHKQIRDTIVGTTPAGYLGCTAAIKSYDFVPRLPSVKLPVLVVCGADDAGTPPEANRR
                     IASLVADGRYEQIASARHFPNVEHPETFNHIMMDWLQSRR"
     gene            446..1225
                     /locus_tag="VHX39_31815"
     CDS             446..1225
                     /locus_tag="VHX39_31815"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3995778.1"
                     /translation="MRLQNKIGIVTAAGSGMGRAGALRFAQEGAAVAVVDLNEAAAGA
                     VVKTITDAGGRAIALAGDLRNDEFARGIVRETTRAFGALDFVWNHVGHPGPAAIEGLD
                     WKEFDLAMDLNVRTVLVTTEAALPELRARGGGALLFTASTSGLTGSQFSPIYNIAKFG
                     IVGLVHGLAKRYARERIRVNAVCPGPTDTPMLRVFVARPDSQLPAGETPESLVQKRGG
                     QVPMGRPAQPEEIANAALFLISDEASYITGVALPVDGGATA"
     gene            complement(1337..1513)
                     /locus_tag="VHX39_31820"
     CDS             complement(1337..1513)
                     /locus_tag="VHX39_31820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995779.1"
                     /translation="MSGQDRCRTERLANGEHGAKQTKRYHRPRRTAACSLFAPDPGTG
                     GNLGFIDIRHAAGV"
     gene            1517..>1843
                     /locus_tag="VHX39_31825"
     CDS             1517..>1843
                     /locus_tag="VHX39_31825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol reductant ABC exporter subunit CydD"
                     /protein_id="HEX3995780.1"
                     /translation="MVLALTGFALAGLLRAGSGYVAERAAFAAGAGARRRLRTDIVTR
                     LARARPLLERGRHSAELTAIVVDRIEALDGLFVRYIPATVLAVASPVIVAVVAAALDP
                     VAGLILA"
BASE COUNT          312 a          594 c          599 g          338 t
ORIGIN      
        1 aacgccgcca ggatcgaccc acctttggga ggaccgcgag aaaatcgtcc gggacgccaa
       61 ctcgctgctg ccgctggccg atgtcaccgt ggagcggtgg ctcactgacg agatgaaaac
      121 ccgcaatccc aaccggcaca agcaaattcg cgacaccatt gttggcacca cgccggccgg
      181 ctatctcggc tgcactgcgg caatcaagag ctatgacttc gtgccgcgct tgccatcggt
      241 aaagcttccg gttctggtgg tgtgtggcgc cgatgacgcc ggcacgccgc ccgaggccaa
      301 tcgccgcatc gccagcctcg ttgccgacgg gcgttatgaa cagatcgctt cggcgcggca
      361 ttttcctaat gtcgaacatc cggaaacctt caaccacatc atgatggact ggctccaatc
      421 acgtcgataa cgaagggaaa cgaccatgcg tctgcaaaac aaaattggca tcgtcaccgc
      481 tgccgggtcc ggcatgggtc gcgctggcgc actccggttc gcacaggagg gcgctgcggt
      541 cgcggtcgtc gacctgaatg aggccgccgc cggcgcggtc gtgaaaacca tcaccgacgc
      601 cggcggccgc gccatcgcat tggccggcga tctgcgcaac gacgagtttg cgcgcggcat
      661 cgtccgagaa acgacccgcg cgttcggtgc gctggatttc gtctggaacc atgtcggcca
      721 cccgggcccg gcggcaatcg aaggcctcga ttggaaagag ttcgatctcg caatggacct
      781 caatgtccgc accgtgctcg tcaccaccga ggcagcattg cctgagttgc gtgcccgcgg
      841 tggcggcgcg ttgctgttta cggcttcgac gtccggactg accggctcgc agttcagccc
      901 gatctataac atcgccaagt ttggcatcgt tggcctggtg cacgggttgg caaagcgtta
      961 tgcgcgcgaa aggatccggg tgaatgcggt atgcccagga ccgacggata cgccgatgct
     1021 gcgggtgttc gtggcgcggc cggacagtca attgccggcc ggcgagacgc cggaatcgct
     1081 ggtgcagaaa cggggtggcc aggtgccgat gggccggccc gcgcaacccg aggaaattgc
     1141 caacgccgcg ctatttctga tctcggacga ggcgtcttac atcaccggcg tcgccttgcc
     1201 ggtcgacggc ggtgctaccg cctgagccgt caacacgtcg gccacccgga gacgccgacg
     1261 ccttccccgt tctgacaatg ccgtgacgca ggcggaaaca gccgcatcga gctctgtcca
     1321 aaatttccgt gacgcgctac acgcccgcgg catgtcggat atcgatgaag ccaaggttgc
     1381 cgcccgtgcc tggatcaggc gcgaacagcg agcaggccgc cgtcctgcgc ggccggtgat
     1441 agcgcttggt ttgcttggca ccgtgctcgc cattggccag gcgttctgtg cggcatctgt
     1501 cctgaccgga caatcaatgg tcctggcgct caccggattc gcgctggcgg gtttactgcg
     1561 cgccggatcc gggtacgtcg ccgagcgggc cgcatttgct gccggggccg gtgcgcgccg
     1621 gcgtttgcga accgatatag tcacccggct ggcgcgggct cgtccgctgt tggagcgggg
     1681 gcgccattcg gccgaactta ctgccatcgt cgtggaccgg attgaagcgc tcgatgggtt
     1741 gtttgtccgc tatatcccgg ccacagttct ggcagtcgcg tcgcccgtta tcgtcgcggt
     1801 cgtggccgcc gcgctggacc cggtggccgg cctgattctt gcg
//
LOCUS       DATAVD010001654         2348 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3132724, whole genome shotgun sequence.
ACCESSION   DATAVD010001654 DATAVD010000000
VERSION     DATAVD010001654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2348
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3132724"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..819)
                     /locus_tag="VHX39_31830"
     CDS             complement(<1..819)
                     /locus_tag="VHX39_31830"
                     /inference="COORDINATES: protein motif:HMM:NF016830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HEX3995781.1"
                     /translation="MVASFARVRWKALAAASALFLLFAWCDKASAQAWWDSLQNGAPD
                     IQKGFLPSPSIATSLPHDGDPGGTRKWLGEHGVVYGLEYTNDVLSNVHGGTRTGTIDQ
                     GKLQGILTIDLGKLAGWEGLRFFANAFQIHNTGRFRRDYVGGLNTIAAIEALSTTRLS
                     EVWLEQTFASGMASFKVGQITADSEFFFSNASQMFLQSDWPTVAAVNLPSGGAAYPLS
                     TPGVRLQVEAVKNVWVRVAMLNGDPAGPGRGDEQLRNRFGTNFRVNDPPFFIGEA"
     gene            complement(978..2345)
                     /locus_tag="VHX39_31835"
     CDS             complement(978..2345)
                     /locus_tag="VHX39_31835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HEX3995782.1"
                     /translation="MRVMLVPPSTKEPSDQDGWRRRRGRASLAEVFGTVATKPSGSFW
                     RKLTSFLGPGYLVAVGYMDPGNWATSLAGGSKFGYALLTVALLSNLMAILLQALCARL
                     GIGAGRDLAQACRDAFPRMVSWPLWLMAEIAICATDLAEVIGTAIGLNLLFGIPLEIG
                     VLITALDVFLILWMQNLGFRWIEAFVVTLLGVITICFGVQIAMADPDWGAVIRGFAPT
                     TDIVTNPQMLYLALGILGATVMPHNLYLHSGVVQTRRFGDSVEDRREAIKLATADSTI
                     ALMFALLINASILILAAATFNKAGKTDVAELDQAYSFLAPMLGSAIAPTLFGIALLCC
                     GLNSTVTATLSGQIVMEGFLDIRLPGWARRLITRSIAIVPAAIVTIWYGAKGSAELLI
                     LSQVVLSLQLPFAIVPLVMFTADRSKLGELVAPRWVTALAALTAALIVALNIKLLYDF
                     VAPGA"
BASE COUNT          466 a          766 c          761 g          355 t
ORIGIN      
        1 ggcctcgccg atgaagaacg gcgggtcgtt gacccggaag ttcgtgccaa agcgattacg
       61 caactgttcg tcgcctcgtc ccggcccggc cggatcgccg ttcagcatgg cgacgcggac
      121 ccagacgttc ttgacggcct cgacctggag gcggacgccc ggagtcgaca gcgggtaggc
      181 agcgccgccg cttggcaagt tgaccgccgc gacggtgggc cagtcgcttt gcaggaacat
      241 ctggctggcg ttgctgaaaa agaattcgct gtcggcggtg atctggccga ccttgaagct
      301 ggccatgccg ctggcaaagg tctgctcgag ccacacctct gaaagccgtg tggtcgacag
      361 cgcctcgatg gcggcgatgg tgttgaggcc gccgacgtaa tcgcggcgga accggccggt
      421 gttgtgaatc tggaacgcgt tggcgaaaaa ccggagccct tcccagccgg cgagcttgcc
      481 gaggtcgatg gtcagaatgc cttgcagctt gccctggtcg atcgtgccgg tgcgcgtgcc
      541 gccatggacg ttggagagca cgtcgttggt gtattccagg ccgtaaacga caccgtgctc
      601 accgagccac ttgcgggttc cgcccggatc gccgtcgtgc ggcaggctgg tggcaatcga
      661 cggcgacggc aggaagccct tctggatatc gggcgcgccg ttctgcagcg agtcccacca
      721 cgcctgggcg ctcgccttgt cacaccaggc aaacagcaaa aacagcgccg acgcagcggc
      781 gagtgctttc caccgcacgc gggcaaaact cgccaccatc aaataaccgc cccgcgcaaa
      841 ttcgccccgt cacgccacga ttatcgttgc cgctcatcca accagcaacg acagcatgac
      901 acgcccccac aggaatgacg cactatccga gggtatgtga cgttgttgcg acagcaacag
      961 tattacagca acaatattca ggctcccgga gcgacgaaat cgtagagcag cttgatattc
     1021 agcgcgacga tcaacgcggc ggtcagcgcc gccagcgcgg tgacccaccg cggcgccacc
     1081 agttcgccga gcttgctgcg gtccgcggtg aacatcacca gcggcacgat ggcgaacggc
     1141 agttgcaggc tgagcaccac ctgactgagg atcagcagtt ccgcgctgcc cttggcgccg
     1201 taccagatgg tgacgatcgc cgccggcacg atcgcgatcg agcgggtgat cagccgccgg
     1261 gcccagcccg gcaggcggat gtcgaggaag ccctccatca cgatctgacc ggacagcgtc
     1321 gccgttaccg tcgaattcag cccacagcac agcagcgcga tgccgaacag agtcggcgcg
     1381 atcgcggagc cgagcatcgg cgccaggaac gagtaggcct ggtcgagctc ggcaacatcg
     1441 gtcttgccgg ccttgttgaa ggtggccgcc gcaaggatca ggatcgaggc gttgatcagc
     1501 agcgcgaaca tcagcgcgat ggtggaatct gccgtggcaa gcttgatcgc ctcgcggcgg
     1561 tcctcgacgg aatcgccgaa ccgccgcgtc tgcaccacgc cagaatgcag atagaggttg
     1621 tgcggcatca cggtggcacc gaggatgccg agcgccagat aaagcatctg cgggttggtg
     1681 acgatgtcgg tggtcggcgc gaagccgcgg atcaccgcgc cccaatccgg atccgccatc
     1741 gcgatctgga cgccaaagca gatcgtgatg acgccgagca gcgtcacaac gaaggcttcg
     1801 atccagcgaa accccagatt ctgcatccat agaatgagga acacgtcgag cgcggtgatc
     1861 agcacgccga tctcgagcgg aatgccgaac agcaggttga gcccgatcgc ggtgccgatc
     1921 acctcggcca aatcggtggc gcagatcgcg atctcggcca tcagccacag cggccacgac
     1981 accatgcgcg gaaacgcatc gcggcaggcc tgcgccagat cgcgtccggc gccgatgcca
     2041 agccgcgcgc agagcgcctg tagcaggatc gccatcaggt tggagagcag cgccaccgtc
     2101 agcagcgcgt agccgaactt ggagccgccg gccaacgagg tcgcccagtt gcccgggtcc
     2161 atgtagccga ccgcgaccag atagcccgga ccgaggaacg acgtgagctt ccgccagaac
     2221 gatccggatg gcttggtggc gacggtcccg aacacctccg cgagcgaggc ccgtccgcgc
     2281 ctgcggcgcc acccgtcctg gtcggacggc tctttcgtgg acgggggcac cagcatgacg
     2341 cgcaaacc
//
LOCUS       DATAVD010001655         2876 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1087538, whole genome shotgun sequence.
ACCESSION   DATAVD010001655 DATAVD010000000
VERSION     DATAVD010001655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2876)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2876)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2876
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1087538"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..309
                     /locus_tag="VHX39_31840"
     CDS             <1..309
                     /locus_tag="VHX39_31840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004273270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEX3995783.1"
                     /translation="VLVGSQRGASEVCQVFQRLPQCLKNVRFSGVSPLRLETVRRDIS
                     AAEARLNGSGRVLIRESGTEPLIRVMAEGEDEAMVSEIVDELCAVIAEAARQPASAAE
                     "
     gene            319..1131
                     /gene="thiD"
                     /locus_tag="VHX39_31845"
     CDS             319..1131
                     /gene="thiD"
                     /locus_tag="VHX39_31845"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEX3995784.1"
                     /translation="MLGRVLIVAGSDSGGGAGIQADIKTVTALDGFAATALTALTAQN
                     TLGVHGVHPVPLDFIARQIEVVMTDIGADVIKTGMLGDSAVIATVCEALDRYASGVPV
                     VVDPVMVAKGGHPLLAAEAVDALRRQLLPRAAVITPNLPEAEALSGMTIATPADMLVA
                     ASALLALGVPAVLLKGGHLPGDELVDILATAEGIETFSGSRIPTRNTHGTGCTTASAV
                     AVGLAQGLSLRDAVLRARAYVRAAIASAPGLGSGHGPLNHAVTVEIGRLAAS"
     gene            1312..1749
                     /locus_tag="VHX39_31850"
     CDS             1312..1749
                     /locus_tag="VHX39_31850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995785.1"
                     /translation="MIAGVCAGLALCGSMLINPAQAEDSSSAPPTLTQPAPLALRPAE
                     MMAAMAAELDRNGNVVVLMLADKPITQADMADVVRTMPNNFASLGFEAVSRRALDVLV
                     SQKAMALDAQKEGLDADPAVVRRSKTAVERALADEAWQCCRHG"
     gene            1804..2253
                     /locus_tag="VHX39_31855"
     CDS             1804..2253
                     /locus_tag="VHX39_31855"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX3995786.1"
                     /translation="MRARVILLPTEEAARSIIAKAQAGADFESLAKTNSNAPNASQGG
                     DLGYASLEALASEIGSVIFALPPGQMTTYPVRSPVGFFVIRVQGRRQRGTPTFEDAKP
                     RLEGELRAEAAQSMIRSVIEHLKLVRLAKPDGSSGPQSGPGQGAASR"
     gene            2355..>2876
                     /locus_tag="VHX39_31860"
     CDS             2355..>2876
                     /locus_tag="VHX39_31860"
                     /inference="COORDINATES: protein motif:HMM:NF014816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HEX3995787.1"
                     /translation="MLTLYFAPNTCALASHIALKDAGAAYELRPIDFRTTQQQAPDYV
                     AINPKARVPAMATPRGILTETPAILAFIAQSYPAARLAPLDDPFAFAEMQAFNSYLCS
                     TVHVAHAHRMRGSRWADDPASFADMQRKVPQSVSACYALIETQMLKGPWVMGDAYTIA
                     DPYLFTLAQWLEDD"
BASE COUNT          520 a          856 c          959 g          541 t
ORIGIN      
        1 gtgctggtcg gcagtcaacg cggcgcttcc gaagtgtgcc aggtgtttca gcgcctgccg
       61 caatgcctta agaatgtgag attttccggg gtgtcaccac tccgtctgga aaccgtccgg
      121 cgcgacatta gcgcggctga agcgcggttg aacggcagcg ggcgtgtatt gatccgtgag
      181 agcgggaccg aaccgctgat ccgcgttatg gctgagggag aagacgaggc gatggtttcc
      241 gagatcgtcg atgagctttg cgccgtgatc gccgaagcgg ctcggcaacc cgcttccgct
      301 gccgagtaag cggtccagat gttgggccgg gtgctgatcg tcgctggctc cgattcggga
      361 ggcggggcag ggatccaggc ggatatcaag acggtgaccg cactggacgg gttcgccgcg
      421 accgcgctga cggcgttgac cgcgcagaac acgcttgggg tgcacggcgt gcatccggtg
      481 cctctggatt tcatcgcgcg ccagatcgag gtcgtcatga ccgacatcgg tgccgacgtc
      541 atcaagaccg gtatgctggg cgattcggcg gtgattgcca cggtctgcga ggcactggat
      601 cgatatgcct cgggcgttcc cgtggtggtc gatccggtga tggtggccaa gggcggtcat
      661 cctctgctgg ccgcggaggc agttgatgcg ttgcgccgcc agttgctgcc tcgagcagcg
      721 gtgattaccc cgaacctgcc ggaagcggag gcactgtcgg gtatgaccat tgcaacgccc
      781 gccgacatgc tggtcgcggc atcggctctg ctggcgttgg gcgtgccggc ggtgctgttg
      841 aaaggcggcc atctgccggg cgatgaactg gtggacatac ttgcgacggc ggaagggatc
      901 gagacgtttt ctggctcacg cattcccact cggaataccc atggaacggg atgcaccacg
      961 gcttcggcgg tggcggtggg tctggcgcag gggctgtcgc tgcgggacgc ggtgttgcgt
     1021 gcacgcgcgt atgtgcgagc agcgatagca tcggcacctg gacttgggtc cggacacggg
     1081 ccgctgaacc atgcggtaac tgtggagata ggacgtctgg ctgcgtcctg aggccctcgt
     1141 tccgggtcct tcgaacgaaa ccgtcggtca agaccgcacg cggcaaattg agcagcggtc
     1201 cacactgcgt cactcatccc gtccaaaatg gcgttgaccc tgatccgccc aggaggcgcg
     1261 atgatgagag gttcctgggg agcttgcagt gcagttgcgc agaccgccgg tttgattgcc
     1321 ggtgtctgcg cgggacttgc cctttgtggt tccatgctca tcaacccggc tcaggccgag
     1381 gattcgtcca gcgcaccgcc gacattaact caaccagcac cgctcgcctt gagaccagcc
     1441 gagatgatgg cggccatggc cgctgaactg gatcgcaatg gcaacgtggt ggtgctgatg
     1501 ctggcggaca agccgatcac ccaggccgac atggccgacg tcgtacgcac catgccgaac
     1561 aatttcgcca gcctcggctt cgaggcagtc tcgcggcgcg cgttggatgt tcttgttagc
     1621 cagaaggcga tggcgctgga cgcgcagaag gaaggtctcg acgcggaccc ggcagtcgtt
     1681 cggcgcagca agactgcggt cgaacgggca ttggccgacg aagcatggca atgctgccgt
     1741 cacggatgag gctcttcatg cacgctatga ccgcgatatc gccggcaagc cggcccggag
     1801 gaggtgcgcg cacgtgtgat cctgctgcca acggaagaag cagcgcgttc gatcattgcc
     1861 aaagcgcagg ccggcgcgga cttcgagtcg ttggcgaaaa ccaacagtaa cgcgcccaat
     1921 gccagccagg ggggtgatct gggctacgcg tcgctcgagg cgctggcatc ggagatcggt
     1981 tcggtaattt tcgcgttgcc gcccggacag atgacgactt acccggttcg ctcgccggtc
     2041 ggatttttcg taatccgcgt gcaggggcga cggcagcgcg ggaccccgac gttcgaagac
     2101 gcaaaacccc ggctggaggg cgaattacgc gccgaagctg cgcaatcgat gattcgttcg
     2161 gtaattgagc atctcaaatt ggtgcgactt gcaaaaccgg acggctcgtc gggacctcag
     2221 tctgggcctg gccaaggtgc cgcgtcgcga taaccctggg tcaggatgcg tgctctggag
     2281 tatgcaacgc gatggggctt tgacactatg cgcccgcccg ccaggcggtc gccgcaagca
     2341 acaggaacca gattgtgctc acgctctact ttgccccgaa cacctgcgcc ctggcatcgc
     2401 acatcgcact gaaagacgct ggtgcggcat atgagctccg acccatcgac ttccgcacca
     2461 cgcagcagca ggcgcctgac tatgtcgcaa tcaatcctaa ggcgcgtgtg ccggcgatgg
     2521 cgacgccacg aggcatcctg accgaaacgc cggccatcct tgctttcatc gcgcagagtt
     2581 atcccgccgc acggctcgca ccgttggacg atccgttcgc gttcgccgaa atgcaggcgt
     2641 tcaacagtta cctttgctcg acggtgcacg ttgcccatgc gcaccgaatg cgcggcagtc
     2701 gttgggccga cgatccggcg tccttcgccg acatgcagcg caaagtgccg caaagcgttt
     2761 ccgcctgcta cgcactgata gagacccaga tgctgaaagg tccctgggtg atgggtgatg
     2821 cttacaccat cgccgatccg tacttgttca cgcttgcgca atggttggag gacgat
//
LOCUS       DATAVD010001656         2997 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2951216, whole genome shotgun sequence.
ACCESSION   DATAVD010001656 DATAVD010000000
VERSION     DATAVD010001656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2997
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2951216"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..492)
                     /locus_tag="VHX39_31865"
     CDS             complement(<1..492)
                     /locus_tag="VHX39_31865"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: protein motif:HMM:NF015319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEX3995788.1"
                     /translation="MTITRCHWAETADAQMQAYHDTEWGVPHHDDRALFELLTLEGAQ
                     AGLSWRTVLVRRDAYRAAYHGFDIERVAAMTDAELEKLLADSPLIRNRLKIFSTRDNA
                     RISLAAIAQHGSLDHYLWSFVDHKPIRNGWTERGQVPATTPVSDAMSKALKKAGFRFV
                     GSTI"
     gene            complement(489..1478)
                     /locus_tag="VHX39_31870"
     CDS             complement(489..1478)
                     /locus_tag="VHX39_31870"
                     /inference="COORDINATES: protein motif:HMM:NF014789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3995789.1"
                     /translation="MTDPIADWFARCPDPATDPLPGMREAGLLDPAPDYATIARLKAA
                     LVERTGLLGVASVWGGRQLVGRHFLGFGTDTQRAEWAGRSLAVAISEPKVGAHPKLLT
                     TRADPFDGGFRITGQKAWVSNGPSADAIIVFAITAEETGRKRYSAFIVPRDTTGLTMS
                     EMPGFHALRPSKHCLLSLDGCVVPASAMLGQPGTAYDRMALPFRDIEDAVGTFGTLGA
                     LRHAIGSCAGADLDQTTELGAIVGLTAVFAAGAQAVVAELDAGRFRTGDATLVGLRVL
                     AQDILSRLRPLPMPAAGDILADLDATLSIAQGPRLARQTNLGQAALRAGERSA"
     gene            complement(2025..2333)
                     /locus_tag="VHX39_31875"
     CDS             complement(2025..2333)
                     /locus_tag="VHX39_31875"
                     /inference="COORDINATES: protein motif:HMM:NF016876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEX3995790.1"
                     /translation="MPRTVRYTLAALRDLDAVIAWHSQPGAGQRAQRRMARIWASIEQ
                     LVDHPCLFAFGPHSGRREFTSEGHRIIYRVRPDTGSNETAGNVEVLRIFGPGQSRETL
                     "
     gene            complement(2340..2531)
                     /locus_tag="VHX39_31880"
     CDS             complement(2340..2531)
                     /locus_tag="VHX39_31880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010511389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995791.1"
                     /translation="MDGLPERGRLNKRDLAWEARMIAEAEAEADAGLLIPSADVKAWI
                     DSLGTANPLPMPGTRTPSR"
     gene            2685..>2997
                     /locus_tag="VHX39_31885"
     CDS             2685..>2997
                     /locus_tag="VHX39_31885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase-related protein"
                     /protein_id="HEX3995792.1"
                     /translation="MASSNDIRATFLDYFARNGHTPVASSPLVPRNDPTLMFTNAGMV
                     QFKNVFTGQERRPYVRATTAQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYF
                     KE"
BASE COUNT          531 a         1021 c          946 g          499 t
ORIGIN      
        1 tatggtggag ccgacaaaac ggaagccggc cttcttgagc gccttgctca tggcgtcgga
       61 gaccggcgtc gtcgccggca cctggccgcg ctcggtccag ccgttgcgga tcggcttgtg
      121 atcgacgaac gaccacagat agtggtcgag gctgccgtgt tgggcgatcg ccgccagcga
      181 tatgcgcgcg ttgtcgcgcg tggagaagat cttcaaccgg ttgcggatca gcggtgagtc
      241 cgccagcagt ttttccagct cggcatcggt catcgcggcg acgcgttcga tgtcgaaccc
      301 atgatacgcc gcgcgatacg catcccggcg gaccaggacg gtgcgccagg acaggccggc
      361 ttgcgcgccc tccagcgtca gcagctcgaa caacgcgcgg tcgtcgtgat gcggcacccc
      421 ccattcggtg tcgtggtagg cctgcatctg ggcgtcggcg gtttccgccc aatggcagcg
      481 ggtgatggtc atgccgaacg ctctccggca cgaagagcgg cctggcccag gttcgtctgg
      541 cgggcgaggc ggggcccttg cgcgatcgac aatgtggcat ccaggtcggc aagaatgtcc
      601 cccgccgccg gcatcggaag cggccggaga cgcgacaaaa tgtcctgcgc cagcacacgc
      661 aggcccacca gcgtcgcgtc gccggtccgg aaccgtccgg cgtcgagctc ggcgacaacg
      721 gcctgcgccc cggcggcaaa caccgcggtc aagcccacga tggcacccag ttcggtggtc
      781 tggtccaggt cggcaccggc gcatgatccg atcgcgtgcc gcagggcacc cagcgtgccg
      841 aaggtgccca cggcatcctc gatatcgcgg aacggcagag ccatccggtc gtaggctgtc
      901 cccggctgtc ccagcatcgc gctggcgggc accacgcatc cgtccagcga cagcagacag
      961 tgtttcgagg ggcgcagcgc gtggaaaccc ggcatttccg acatcgtcag gccggttgtg
     1021 tcccgtggca cgatgaacgc gctgtagcgc ttgcgaccgg tttcctccgc ggtaatggcg
     1081 aagacgatga tcgcgtcggc ggacggcccg ttgctgaccc acgccttctg gccggtgatc
     1141 cggaagccgc catcgaacgg atcggcgcgt gtggtcagca gcttcgggtg ggctccgacc
     1201 ttcggttccg agatcgcgac tgccagcgat cggcccgccc actccgcgcg ctgggtgtcg
     1261 gtcccgaagc ccaggaagtg gcgaccgacg agttggcggc cgccccagac actggccaca
     1321 cccagcaggc cggtccgctc gaccaatgcc gccttgagcc gagcgatagt cgcataatcc
     1381 ggggcagggt cgagcaatcc ggcttcccgc atacccggca acggatcggt tgccgggtcg
     1441 gggcagcggg caaaccagtc agcgatcggg tccgtcatgc tgggagtttg gcatgaagga
     1501 gcatgccgta acagcggggc gcttcgacgc attaacagcg caacgacgct tgcccagccc
     1561 gcacctaatc ccctgtcgtc gcgcaatgat ccgctccggc taccacgcga catgaccggc
     1621 gagcccgcca ggacggaagc cttcatcacg cgctggcagg gtcagcaggg cgggcaggaa
     1681 cgcgccaact acgccctgtt cctgtccgaa ctctgcgacg ttctaaggcg acgcgcagga
     1741 ataaccgagt cgcttgggac ggcgcacgtc ctctcatcgt tatggcgggt gaaggcccgc
     1801 catgacggga ttgggcggca gtgccaacgt cgaagcactt atttgtccac ggagcctaag
     1861 cgtgcgccgc ccggcccccg ccgccaagcc gaggactatg caagggcgct gccgacgacc
     1921 cacggctggc cgcccttcat cctggtctgc gacgtcgggc agtcgcgtag cgtcccgtca
     1981 tcgcggatcg aaacgaccga ggcttcctgc ccaagatcat acgctcaaag cgtctccctg
     2041 gactggcccg gaccgaatat gcgcagcacc tcaacgttgc cggcggtttc gttcgacccg
     2101 gtgtcggggc gcacccgata gatgatgcgg tgcccctcgg acgtgaactc ccgccgcccc
     2161 gaatgtggcc cgaatgcaaa caggcacgga tgatccacca attgctcgat cgaggcccat
     2221 attcgcgcca tccgtcgctg agcgcgctgt cctgctccag gttgcgaatg ccaagctatt
     2281 accgcatcga ggtccctcaa tgcggccagg gtgtatctga cggttcgagg caagccggtt
     2341 tatcgcgaag gcgtccgtgt gccaggcatc ggcaaggggt tggcggtccc gagactatcg
     2401 atccatgcct taacgtcggc ggacgggatc agcaaccccg catcggcctc ggcctcggcc
     2461 tcggcaatca tccgggcttc ccacgccaaa tcccgtttgt tgagccgtcc gcgttcgggc
     2521 aatccgtcca tcggcctctt ctcctccccc cctaaatagg ccggccatgg ggctgaatcc
     2581 agggaaaacc ccgccccacc cgtgacaccg gcccgcccct gcgctacgtc ccacgcttac
     2641 gtgtgacact cttgaccagc agacttggga aacacctgac cgccatggcc agcagcaacg
     2701 acatccgagc caccttcctc gattatttcg cccgcaacgg tcacacgccg gtggcgagtt
     2761 cgcctctggt tccgcgcaac gaccccacgc tgatgttcac caacgcgggc atggtgcagt
     2821 tcaagaacgt cttcacaggc caggagaggc ggccttatgt ccgcgccacc acagcgcaga
     2881 aatgcgtccg cgccggtggg aagcacaacg acctcgacaa tgtcggctac acggctcggc
     2941 atcatacctt cttcgaaatg ctggggaatt tcagtttcgg cgactacttc aaggaag
//
LOCUS       DATAVD010001657         2148 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3508934, whole genome shotgun sequence.
ACCESSION   DATAVD010001657 DATAVD010000000
VERSION     DATAVD010001657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3508934"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(199..1230)
                     /gene="obgE"
                     /locus_tag="VHX39_31890"
     CDS             complement(199..1230)
                     /gene="obgE"
                     /locus_tag="VHX39_31890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEX3995793.1"
                     /translation="MFIDEARIKVKAGDGGNGCMAFRREKFVPRGGPSGGDGGHGGDV
                     VLEASQSHNTLVHFRFNPEHKGERGRHGEGSNCSGRDGEDTVLKVPVGTVVYDDTTGE
                     LIHDFRHPNERMILAKGGRGGRGNQHFATSTHQAPREHELGHAGEERLIRLELKLLAD
                     VGLVGHPNVGKSTLIARISAARPKIADYPFTTLEPNLGVVTVGEWPNEESFVVADIPG
                     LIEGAHLGAGLGAQFLRHIERTRLLAHIVDVSDGSGRPDPVEDYNVIEAELKSFSHGL
                     EEKPRVVVASKCDVANPDKLKKLQSMAKRKKLPFYAISAVTGEGIDALKYALAEKVRA
                     LRVPLSEAG"
     gene            1526..>2148
                     /locus_tag="VHX39_31895"
     CDS             1526..>2148
                     /locus_tag="VHX39_31895"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEX3995794.1"
                     /translation="MLRLPPPRVFSAFCLAFLFLLPLVQLRGPSTTGVIGGTVYDPQH
                     AVIPNARIVAINEANGATFVAYTDKSGNYTLADLPPGTYSVDITGDAFTAYTATHVVV
                     ELGRRTLVTTTLHIGATASTIHVGTIVPFQSTYPSIATNITQSQLHNMPSNSRRWSSF
                     ALLTPGVVSDQSGQGLLSFRGISGLLNNNTIDGADNNQAFFSEERGR"
BASE COUNT          446 a          645 c          597 g          460 t
ORIGIN      
        1 tgccggagca aacagcacct ggtcgaacgc aaacaggtct gcagctgcgg tggcgatggc
       61 aagatgtccc cggtgcggag gatcaaagct gccgccaaaa aaagcaatgc gcctcatgcg
      121 gttcctatct cacagtgatc agggatcggg ggcaagaaac ggcaaaagcc ctgttccctg
      181 tccgctgagg tctgtgcttc agcctgcctc agaaagtggg acgcgcaggg ctcggacctt
      241 ctccgccaaa gcgtacttca gagcatcgat tccctctcct gtaaccgcag agatggcata
      301 aaagggaagc tttttgcgct tagccatcga ttgcaacttc ttcaacttgt cagggtttgc
      361 aacgtcgcat ttgctggcga ccacgacgcg cggcttctct tccagaccat gactgaagct
      421 cttcaactct gcttcgataa cgttgtagtc ttccacagga tcgggacgcc cgctgccatc
      481 ggacacatcg acaatatggg ccagcaagcg ggtacgctca atgtggcgca gaaattgcgc
      541 gcccagccct gcgccgaggt gtgcaccttc aatcaggccg ggaatatcgg ccacgacaaa
      601 gctctcctcg ttgggccact cgcccaccgt cacgacgccc aggttgggtt ccaaggtggt
      661 aaatggataa tcggcaattt tggggcgagc ggcggaaatg cgggcaatca gtgtggactt
      721 gcctacgttt gggtgaccga ccaggccgac atccgcgagc agcttcaact ccaatcgaat
      781 caggcgttcc tcgccggcat ggccgagctc atgctcgcgg ggagcctggt gggtagaggt
      841 ggcaaaatgc tgattcccgc ggccgcctcg gccacccttg gccagaatca ttcgctcgtt
      901 ggggtgacgg aagtcatgaa tcagctcgcc cgtggtgtcg tcatagacga ccgtaccgac
      961 gggaactttc aggacggtat cctcgccatc gcggccggag caattggagc cctcgccgtg
     1021 acggcctcgt tcccctttat gttctggatt gaagcggaaa tggaccagcg tattatgact
     1081 ctggcttgcc tcaagaacca cgtcgccgcc atgtcctcca tcgcccccgg aagggccgcc
     1141 gcgaggcaca aatttctcgc gtcgaaaggc catacagcca ttcccgccat cgcccgcctt
     1201 caccttgatc cttgcttcat caataaacat cggtgtgaat agtcttcctg ccgctgggga
     1261 atcgcgttac tctcagtgta acgctcaagg ccatggttcc cgtcccgtaa tgtccgcgac
     1321 cggatgcgag cttcaaccgg catagttcga tttcgtgtgg ggaagatttc gttcgacaag
     1381 tcacggacgg tacagccgaa acacggagag cctggcgcga gccaatgtct catcgggctt
     1441 ctgctttcat tgcaccgctt tcagtgtcgt ccgcgcaggc accctgtcat tgccgaaacg
     1501 ggcataaaag attcgggaga tcgtcatgct gcgcttgcct cccccgcgcg tgttcagcgc
     1561 gttttgtctt gcgttcttat tcttgctgcc attggttcag ctccgtggtc cgtcgactac
     1621 cggcgtaatt ggcggaactg tctatgaccc gcaacacgcg gtcattccga atgcgcgcat
     1681 cgttgccata aacgaggcga acggtgcgac ttttgtcgcc tacaccgaca agagcggcaa
     1741 ctacactctg gccgatctgc cccccggcac gtattccgtc gacatcactg gagatgcatt
     1801 caccgcgtac acggcaacgc atgtcgtggt ggagttgggg cggcgaacgc tggtaacgac
     1861 gacgcttcat attggcgcca ccgccagcac gatccacgtg gggacgatcg tcccgtttca
     1921 gtcaacctat ccctcgatcg ccaccaatat tacgcagtcg caactgcaca acatgccttc
     1981 caacagtcgt cgctggagca gttttgcgtt gttaactccc ggtgtggtga gcgatcaaag
     2041 cggacaggga ttgttgagtt ttcgcggcat cagcggactg ctgaataaca atacaatcga
     2101 cggcgccgat aataaccagg ccttcttctc agaagaacgc ggccggaa
//
LOCUS       DATAVD010001658         2317 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2951353, whole genome shotgun sequence.
ACCESSION   DATAVD010001658 DATAVD010000000
VERSION     DATAVD010001658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2317)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2317)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2317
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2951353"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..418)
                     /locus_tag="VHX39_31900"
     CDS             complement(<1..418)
                     /locus_tag="VHX39_31900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3995795.1"
                     /translation="MTVHYGTQAVGDVEVFYREAGPKDAPVILLLHGYPTASHMFRDL
                     IPRLESRFRLIAPDLPGFGQTKAPPRGTFDYTFDNLAGVIDDFTQALGIARYAIYIFD
                     FGAPTGLRLASAHPERVTAIISQNGNAYEEGLGPLWA"
     gene            complement(533..1054)
                     /locus_tag="VHX39_31905"
     CDS             complement(533..1054)
                     /locus_tag="VHX39_31905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995796.1"
                     /translation="MMTAIGKARTDHRPGRITTLFVAESAPVGGTFFYYGNGHLGRYL
                     QRSIEEVLAGDGDFLERFKSYGWYLDDLVPVPVNHLTPRERTAAHLGAAQDLQRRIAE
                     YRPLAIVCLLKSIGAIVRAAASGAGFDGPFFEVPFPGNGRQRRFHLQMIDIVLELPRE
                     PLSQGSDPARGRR"
     gene            complement(1131..1670)
                     /gene="mug"
                     /locus_tag="VHX39_31910"
     CDS             complement(1131..1670)
                     /gene="mug"
                     /locus_tag="VHX39_31910"
                     /EC_number="3.2.2.28"
                     /inference="COORDINATES: protein motif:HMM:NF007570.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000700 - mismatch base pair DNA
                     N-glycosylase activity [Evidence IEA];
                     GO_process: GO:0006285 - base-excision repair, AP site
                     formation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="G/U mismatch-specific DNA glycosylase"
                     /protein_id="HEX3995797.1"
                     /translation="MDHGLVVVFVGINPSPLAAATGHRFAGPSNRFWRVIHLAGFSPV
                     LLRADQDRTLPQYGCGLISAISRPTRRANELSRSELAAAGDALGAKIQRHRPKWIAFL
                     GKGAYSAIMARRDIAWGHQNKTMGAAQVWVLPDPSGLNRQTLPQLVAAYGALRVAAAG
                     DFAAFALGDMDRLDGSVQI"
     gene            1922..>2317
                     /locus_tag="VHX39_31915"
     CDS             1922..>2317
                     /locus_tag="VHX39_31915"
                     /inference="COORDINATES: protein motif:HMM:NF012696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEX3995798.1"
                     /translation="MGLIDKAVTANREYAKNPDPKLADRPRPRLAVVTCMDPRLSDLP
                     AILGLPHAELDVIRTAGPAVTDEVLGELVASNRVIGTTEIMLLNHTGCGFTTFTDEEL
                     NVKLAKATGDSSPAPMRFFAFTDPDQHTRE"
BASE COUNT          435 a          717 c          733 g          432 t
ORIGIN      
        1 atgcccaaag agggcctagg ccttcctcgt acgcgttgcc gttttggctg atgatcgcgg
       61 tgacccgctc cggatgagcg gacgcaagcc gcagtccggt gggggctccg aaatcgaaga
      121 tataaatcgc gtagcgcgcg atcccgaggg cttgggtgaa gtcgtcgatc acgccggcca
      181 gattgtcgaa ggtgtaatcg aacgttcccc gcggcggcgc cttggtctga ccaaagcccg
      241 gcagatccgg ggcgatcaga cggaagcgac tttcgaggcg cggtatcagg tcccggaaca
      301 tgtggctggc ggtcgggtat ccgtgcagaa gcaagatgac cggggcgtcc ttgggaccgg
      361 cttcgcggta gaagacctcg acgtcgccga ccgcctgggt cccgtagtga acggtcatat
      421 gcttcgcctt tttcgtactc tgcggatgag agcatcgctg gtagcagtgg cggggggaaa
      481 tggcgtcaga ttatgggatc gatcactacc ggttatcgct tgcgccgcat ggtcagcgcc
      541 gacctcgcgc cgggtcgctt ccttgcgaaa ggggctcccg tggaagctcc agaacgatgt
      601 cgatcatctg caggtgaaag cggcgttgtc gcccgttgcc gggaaatggc acctcgaaga
      661 acgggccgtc gaaacccgct ccggacgcgg cggcgcgaac gatggcgccg atgctcttca
      721 gcaggcacac gatggcgagc gggcggtatt cggcgatgcg tcgttgcagg tcctgcgccg
      781 ccccgaggtg cgcggccgtt cgttcgcgcg gcgtcaagtg gttcaccggc accggaacga
      841 gatcgtcgag ataccatccg taggatttga aacgctcaag gaaatcgccg tctccggcga
      901 ggacctcctc gatcgagcgc tggaggtacc gccccaggtg tccgtttccg tagtagaaga
      961 aagtgccgcc gacgggagcc gactccgcca cgaacagcgt cgttatccgc ccaggacgat
     1021 gatccgttcg tgcctttccg atggcagtca tcatgcgttc ggaaatcccg ctgggcgatg
     1081 ctatcggctt ttcacgcaag tgaccattcg ctcccgtgtg tggcgcgccg tcagatttga
     1141 actgaaccat ccaggcggtc catatcgccg agggcgaaag ccgcgaagtc gccggccgca
     1201 gcgacgcgca gcgcgccgta cgccgcaacc aactgcggaa gagtttgccg gttaagcccg
     1261 ctcggatccg gtaggaccca gacctgggcg gcgcccatcg ttttgttctg atgcccccag
     1321 gcgatgtccc gacgcgccat gatggctgag taggcgcctt ttccgaggaa cgcgatccat
     1381 ttcggtcgat gcctttggat cttcgcgcct aaggcatccc ccgcggcggc aagctcgctg
     1441 cgcgacagtt cgttcgcccg tctagtcggc cggctgatcg ccgaaatcag gccgcatccg
     1501 tattgcggaa gcgttcggtc ctggtcggcg cgcaggagca ccggggagaa gcccgcgaga
     1561 tgaatgacgc gccagaagcg gttgctgggc ccggcgaacc tgtggcccgt agcggccgcc
     1621 agcgggcttg gatttatgcc gacgaagacg actaccaggc cgtgatccaa tatgtcgggt
     1681 agcggtagcg gtttccgcat gtctgcctcg gtttgtccgt tacggatagt acccgatcgt
     1741 tcggcgatag aacgtcccat caggtcacgg cgcgataacc agaggtgatc aatctgatgg
     1801 tcgcaggcga tttcccttcg gcacgcgaaa aggctgaact tgccccgtgc attcgttgga
     1861 gcccgcgtcg ctcgcggcag ctcgatcgaa tcgacccgcg ccaaacccac aggagatgtc
     1921 aatgggcctc atcgataaag ccgtcacggc aaaccgcgag tatgcgaaaa atcctgatcc
     1981 taaactggct gaccgtccgc gacccaggct cgccgtggtg acgtgcatgg atccgcgtct
     2041 ctcggatctt ccggcgatct tgggactacc gcacgcagaa ctcgatgtca tccgcaccgc
     2101 cggaccggcg gtgacagacg aagtgctcgg cgagctcgtc gcctccaacc gcgtgatcgg
     2161 aaccaccgag atcatgctgc tcaatcacac gggttgcgga ttcaccactt tcaccgacga
     2221 agaacttaac gtgaaactgg ctaaggccac cggcgactct tcccccgcac ccatgcgctt
     2281 cttcgctttc acggatcccg accagcacac tcgggaa
//
LOCUS       DATAVD010001659         1660 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1087780, whole genome shotgun sequence.
ACCESSION   DATAVD010001659 DATAVD010000000
VERSION     DATAVD010001659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1087780"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(300..1100)
                     /locus_tag="VHX39_31920"
     CDS             complement(300..1100)
                     /locus_tag="VHX39_31920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HEX3995799.1"
                     /translation="MTDKVLYEADGAIVTITLNDPAMRNPISEAEMVDGIVNALDRLN
                     QDKSARVAILTGAGSAFSSGGDLRKMQAEFAARAEKPHLTPLYYKHGIQRIPLAFEKL
                     DVPIIAAVNGPAIGAGLDLACMCDMRIAAETARFAESFVKVGIVPGDGGAWLLPRVVG
                     FSKACEMAFTGDTLNAAEALACGLVSRVVPDAELLGAAKALAERIAVNPPHAVRMAKR
                     LLLEGRNTRLDTLLEMSAAMQALTHATPDHREAVNAFLEKRKPVFKGD"
     gene            complement(1115..>1660)
                     /locus_tag="VHX39_31925"
     CDS             complement(1115..>1660)
                     /locus_tag="VHX39_31925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3995800.1"
                     /translation="ITIRPIIAMTGEHHFNEVVFQDAFLPETALLGKEGDGWNQVTSE
                     LAFERSGPERFLSSFWLVIELVRALGRDPSDAAAAAIGRLTAHIMTLRRLSRSVAGML
                     QAGENPALQAALVKDLGAVLEQEIPEIARTLIAAEPDRGSTQAFAATLAHTMLHAPSF
                     SLRGGAREILRGIIARGLGLR"
BASE COUNT          335 a          539 c          460 g          326 t
ORIGIN      
        1 tatagaagca aacggcggtc gaatgaaata tgaggatttt ctcgacgaag atgatccgca
       61 ccgtgaagac agggcagccg atctagccga aaccgtaagg aatactgttt tttagagatg
      121 gtcactgttg gggatgtgat cgagattttt gatccgtata cgcgccccaa aaagccaaag
      181 tgcatatttg cgtttgttct caacggttgc tttttttacg gatcaacacc gacccccttt
      241 ggatgccgaa ttatccgctc atgacggcta caaatacgtt cctggaacac gaagtgcaat
      301 caatccccct tgaacaccgg cttgcgcttt tccagaaatg cattcaccgc ctcgcggtgg
      361 tctggcgtcg cgtgggtcaa tgcctgcatt gccgccgaca tttccagcaa cgtatcgagc
      421 ctcgtattgc ggccttccag cagcaaccgt ttcgccatcc gcacggcgtg tggcggattg
      481 accgcgatcc gctcggccag cgccttcgcc gcccctaaca attctgcatc cggcacaacc
      541 cgcgacacca ggccgcacgc taaagcctca gccgcgttca gcgtatcccc cgtaaacgcc
      601 atctcgcacg ccttcgaaaa ccccaccacc ctgggcagca gccatgcccc gccatcgccc
      661 ggtacgatgc cgaccttcac aaaactttcg gcaaaccgag cggtctccgc agcaatccgc
      721 atgtcgcaca tgcatgccag atcgaggccg gcgccaatcg ccggtccgtt cactgccgca
      781 atgatcggca catccagctt ctcgaacgcc aacgggatcc gttgaatgcc gtgcttgtaa
      841 tacagcggcg tcagatgcgg cttttcggcg cgcgcggcaa actcggcctg catcttgcgc
      901 agatcgccac ccgaggaaaa cgcactgccg gcgccggtca gaatggcaac ccgcgccgat
      961 ttgtcctggt tcagccggtc cagagcgttg acgatcccgt cgaccatctc ggcttccgaa
     1021 atgggattgc gcatcgccgg atcgttcagc gtgatcgtta cgatggcgcc gtccgcttcg
     1081 tagagtactt tatcggtcat gtggatacct ttggttagcg cagccccagc ccacgggcga
     1141 tgatcccgcg caggatctcc cgcgcgccac cacgcagcga aaacgatggc gcgtgcagca
     1201 tggtgtgcgc cagcgtggcg gcaaatgcct gcgttgaccc tcggtccggt tcggcggcga
     1261 tcagagtgcg ggcgatctcg gggatttcct gttccagcac ggcacccagg tctttgacca
     1321 acgcagcttg cagggccgga ttctcgccag cctgcaacat accggcaacc gatcgcgaca
     1381 gccgccgcaa tgtcatgata tgtgcggtca gccggccgat cgccgctgcc gccgcatcgg
     1441 acggatcgcg gcccagagcc cgcaccagtt cgataaccag ccagaacgag gaaaggaacc
     1501 gctccggccc gctgcgttcg aacgccagtt cgctggtcac ctggttccag ccgtcaccct
     1561 ctttgcccag cagggcggtc tcgggcagga acgcgtcctg gaacacgacc tcattgaaat
     1621 gatgctcgcc ggtcatggcg atgatggggc ggatggtgat
//
LOCUS       DATAVD010001660         4261 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1457392, whole genome shotgun sequence.
ACCESSION   DATAVD010001660 DATAVD010000000
VERSION     DATAVD010001660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4261
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1457392"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..1913)
                     /gene="asnB"
                     /locus_tag="VHX39_31930"
     CDS             complement(36..1913)
                     /gene="asnB"
                     /locus_tag="VHX39_31930"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014190068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HEX3995801.1"
                     /translation="MCGLTGFIGAGGRADLEAMAGALLHRGPDDAGFHIEPGFALHLG
                     FRRLAIVDIEGGHQPMWNEDGSVCVLCNGEIYNQAELRAELLSKGHVFRSDHSDTEVL
                     VHGYEEWGEDLPARLNGMFALVVWDRPRQRLFAARDRFGEKPFFYVSRPGFFAFASEL
                     SALIRHHAVDRTIDPRALQKFFAYGYIPAPGALYRGARKLPGGCCLTVDLASFCVREH
                     RYWKFAIEADEHAPEHRIPELTDELRALLDHAVARRLVSDVPLGIFLSGGIDSNIVLA
                     LAARHRPAASLDTFTIGFNEPSFDESAHARAAAAAIGSRHHERILDFDTARDLAGEVL
                     ARLDEPTGDASILPTYLLAGFARESVTVALSGDGGDELFAGYDPFAALGPAAWYDRLV
                     PPPVHLVLRRLAGMLPHGTSNMSLDFKLRRGLMGLSYPSSVRLPVWMSPLEPARIGAL
                     FDEPMRTEELYSEALEAWDNARATNPVDRSLEFFTNFYLQDDILAKTDRAAMQVSLEA
                     RAVFLDNEVVDFCARLPHGYKYRRGVRKFLLRRAAEGLVPDTVLQRPKKGFGIPFARW
                     LRQMPAMPPLAAIPGLRTDWIVERWFAARAGEADERLLLWSWLSLQGIVGQNRGLAVA
                     A"
     gene            complement(1920..2933)
                     /locus_tag="VHX39_31935"
     CDS             complement(1920..2933)
                     /locus_tag="VHX39_31935"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014190066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3995802.1"
                     /translation="MSAARLLIISDNTDLATISVIVPVKNEAENLPPLIDRLLPVLHG
                     LGRNFEVIIVNDGSTDGSLRVLRELAASHPELRVIDLARNYGQTAAMMAGIDHARGDI
                     IVPIDADLQNDPADIPKLLAKLDEGYDVVSGWRVDRQDAALRRNFVSRVANRVISRVS
                     GVRLHDYGCSLKAYRRSVLGPVRLYGEMHRFVPIYASWYGARVTEIPVNHSPRLHGKS
                     NYGLERALKVVLDLMVVRFLDRWLAKPIYVFGGVGILWFVVAMLSTVYMMYLKYFGNL
                     SMIETPLPLLAAMSVMMGVMSISIGLVAEIMVRTYFESQGKSTYHARELINLDAQPAR
                     RYG"
     gene            3197..>4261
                     /locus_tag="VHX39_31940"
     CDS             3197..>4261
                     /locus_tag="VHX39_31940"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3995803.1"
                     /translation="MKFGIFYELQLPRPWGVDDERILYQNALTQVELADRLGYDYAWE
                     VEHHFLEEYSHSPSPEVFLGAASQRTKNIRLGHGIVQLTTNPPQRIAERIACLDLVSN
                     GRVEFGTGESGSTTELGGFGREMETKREVWEDALRCIIPMFQDKGVELNTKWHKMPLR
                     NVLPKPVQKPHPPLWVACSQLETLEMAGRRGIGALGFQFLSADAAFAWVQAYYNAFTK
                     RQEKLCDYQTNPNIALVSYFMCAETDEEARRRAEGATFFQYALRFFGASSGRKRPDPY
                     TVNIWDEYNKWKAANPEAAARALSGGLIGSPETIRRKLRRFRSSNIDQVILLNQAGRN
                     THEHICESLELFAKEVMPEFH"
BASE COUNT          910 a         1386 c         1227 g          738 t
ORIGIN      
        1 aacgtaggat acgcagcagc agcgccggga ttgcttcagg ccgcaaccgc cagcccccgg
       61 ttctgcccca cgatcccttg cagactcagc cagctccaca gcaacagccg ttcgtccgcc
      121 tcccccgccc gagcggcaaa ccagcgctcg acaatccaat ccgtgcgcaa ccctggaatg
      181 gcagcaagcg gcggcattgc aggcatttgc cggagccagc gtgcgaacgg aatcccgaag
      241 cctttttttg gtcgttgcaa taccgtatcc ggtaccaaac cctccgcagc ccgccggagc
      301 aaaaacttcc ttacgccgcg acggtactta tagccgtgcg gcagccgggc acagaaatcc
      361 accacctcgt tatccagaaa cacggcgcgc gcttccagcg agacctgcat cgccgcccgg
      421 tcagtctttg ccagaatgtc gtcctgcagg taaaaattgg tgaagaactc cagcgagcgg
      481 tcgaccggat tcgttgcccg cgcattgtcc cacgcttcca atgcttccga gtacaactcc
      541 tcggttcgca ttggctcatc gaacagcgca ccgatccgcg caggttcaag cggcgacatc
      601 cagaccggca aacgcaccga cgacggatac gacagaccca tcaacccccg ccgcagtttg
      661 aaatccaggc tcatgttcga ggtaccgtgc ggcagcatcc cggccaaacg gcgcaacaca
      721 agatgcaccg gtggcggcac cagccggtcg taccaggccg ccggaccgag cgccgcaaac
      781 gggtcatatc cggcaaacaa ttcgtccccg ccatcacccg acagcgccac cgtcacgctc
      841 tctcgcgcga agccggcaag cagataggtt ggcagaatgg aggcatcccc ggtcggctcg
      901 tccaggcgcg ccagaacctc accggcaaga tcgcgcgccg tatcgaaatc caggatccgt
      961 tcgtgatggc gcgaaccaat cgcggcagcg gcggcccgcg catgagcgct ttcgtcgaac
     1021 gatggctcgt tgaagccgat ggtgaatgta tcgagactgg ccgctgggcg atgcctggcc
     1081 gccaacgcca gcacgatatt cgagtcgatc ccgcccgaaa gaaaaatccc cagcggcacg
     1141 tcgctgacca gacgccgcgc cactgcgtga tccaacaacg cgcgcagttc gtcggtcagc
     1201 tccggaatgc ggtgttcggg ggcatgctca tccgcttcga tggcgaactt ccagtagcgg
     1261 tgctcacgca cgcagaagct ggccagatcg acggtcaggc agcatccacc gggcagtttg
     1321 cgcgccccgc gatacagcgc gccaggagcc gggatatagc cataggcaaa aaacttctgc
     1381 agcgcgcgcg ggtcgatcgt gcggtcgacc gcatggtggc ggatcagcgc tgacaattcc
     1441 gaggcaaagg caaaaaagcc cggccgtgaa acatagaaga acggcttctc gccgaaccgg
     1501 tcgcgcgccg cgaacaaacg ctgccgcgga cggtcccaga ccaccaaggc gaacatcccg
     1561 ttcagccgcg cgggcaggtc ctcgccccat tcctcgtagc catgcaccag cacttcggtg
     1621 tccgagtggt cgctgcggaa cacatgacct ttggacagga gttcggcacg gagttcggcc
     1681 tgattataaa tctcgccatt gcacagcacg cagaccgagc cgtcttcgtt ccacatcggt
     1741 tgatggccgc cctcgatatc gacgatcgcc agacggcgaa acccgagatg cagcgcaaac
     1801 ccgggttcga tgtggaaccc ggcgtcatcc gggccgcgat gcagcagagc gccggccatc
     1861 gcttcgaggt cggcacgccc tcctgcgcca ataaatccgg tcagtccgca catgcaggtt
     1921 cagccatacc ggcgcgcagg ttgcgcgtcg agattgatca gttcccgcgc gtgatacgtg
     1981 cttttgcctt gcgattcgaa ataggtccgc accatgatct cggcgacgag gccgatcgag
     2041 atgctcatca cacccatcat caccgacatt gccgccagca gcggcagcgg cgtctcgatc
     2101 atggaaaggt taccgaaata cttcaaatac atcatgtaga cagtgctgag catggcaaca
     2161 acgaaccaca atatcccgac gccgccgaac acatagatcg gcttggcgag ccagcgatcg
     2221 agaaaccgca ccaccatcag gtccagcacg accttcaacg cccgttccag accatagttg
     2281 gatttgccgt gcagccgcgg gctgtgattg accggaatct cggtgacgcg cgcaccatac
     2341 cacgatgcgt aaatcggcac gaagcggtgc atctcgccgt acagccgcac cgggcccagc
     2401 acactgcggc ggtacgcctt cagggaacag ccgtaatcgt gcaggcgcac gccggacacg
     2461 cgggaaatca cgcgatttgc cacccggctg acgaaattgc ggcgcagcgc ggcgtcctgc
     2521 cgatccacgc gccagccgga aacgacatca tagccctcgt ccagtttcgc cagcagcttc
     2581 ggaatgtcgg ccggatcgtt ctgtagatcg gcgtcgatcg gcacgatgat atcgccacgg
     2641 gcgtggtcaa tcccggccat catcgccgcg gtctgcccat aattgcgcgc cagatcgatc
     2701 acccgaagct ccgggtgcga cgcggccagc tcacgcagca cacgcaatga accatccgtg
     2761 ctgccgtcgt tgacaatgat gacctcaaaa ttccggccga gcccgtgcag caccggaagc
     2821 agccgatcga tcaacggcgg cagattttca gcctcgttct tgaccgggac gataacggaa
     2881 atcgtggcca gatccgtgtt gtcgctgatg atcaaaagcc tggcagcgga catgatgatc
     2941 tcctgtcgtg ctttcgacgg tctcgcgatt ttcagtccgc tgcgccggcg cggttcaaac
     3001 gcgcgttgcg ttggggggcg aggtccgcaa cggcgtggcc gattttcgtc gcgattcagt
     3061 gtcaacaaag tatcaattct ggcgaaaccc tcgcaccgct gcgggccgtg atccggggat
     3121 cggcgccgcg tcgctcttga catggccccg gtcctgtcgc gcactcgcag ccgagcaaac
     3181 gaacaggaaa ccagccatga agttcgggat cttttatgaa ctgcaactgc cgcgtccctg
     3241 gggtgtggac gacgagcgga ttctgtatca aaacgctctc acccaggtcg agctggccga
     3301 ccggcttggt tacgactacg catgggaagt cgagcatcat tttctcgaag agtactcgca
     3361 ctccccttcc cccgaagttt tcctcggcgc cgcctcccag cgtaccaaaa acattcgact
     3421 gggccacggc atcgtccaac tgacgaccaa tccgccgcaa cggattgccg agcggattgc
     3481 ctgtctcgat ctggtatcga acggacgggt cgagttcggc accggcgagt cgggttccac
     3541 caccgagctt ggcggtttcg gtcgcgagat ggaaaccaaa cgcgaggtgt gggaagatgc
     3601 tctgcgctgc atcatcccga tgttccagga caagggagtc gaactcaaca ccaaatggca
     3661 taaaatgcca ttgcggaatg tgctgccgaa gccggtgcag aagccgcatc cgccgctgtg
     3721 ggtcgcctgt tcacagctcg agacgctgga aatggccggg cgccgcggca ttggcgccct
     3781 gggctttcag ttcctgtccg ccgacgcagc gtttgcttgg gtgcaggctt actacaacgc
     3841 gttcaccaaa cgacaagaaa agctgtgcga ttatcaaacc aatccgaaca tcgcattggt
     3901 ctcgtacttc atgtgcgcgg aaaccgatga ggaagcccgt cgccgagccg agggcgcaac
     3961 gttcttccag tacgcgctgc ggtttttcgg tgcatcgtca gggcgcaagc ggcccgatcc
     4021 ttacacggtc aatatctggg atgagtacaa caagtggaag gccgccaacc cggaagccgc
     4081 tgcccgcgca ctgtccggcg ggctgatcgg ctcaccggaa acgattcggc ggaagttgcg
     4141 tcgcttccgt tcgtcgaaca tcgaccaggt cattctgctg aaccaggccg gccgcaacac
     4201 gcatgaacac atttgcgaaa gtctggaact gttcgcgaag gaggtcatgc cggaattcca
     4261 t
//
LOCUS       DATAVD010001661         2403 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2951425, whole genome shotgun sequence.
ACCESSION   DATAVD010001661 DATAVD010000000
VERSION     DATAVD010001661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2951425"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..290)
                     /locus_tag="VHX39_31945"
     CDS             complement(<1..290)
                     /locus_tag="VHX39_31945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995804.1"
                     /translation="MLNSVDEANRLIMAGKRLHIAGDAAALARLGRGDWIGGTIPYFL
                     TAEGGQADRKRVFVTELPPEVGEVEIGFVTSDQLADIPGAAPKHGFSLIVVPG"
     gene            complement(308..529)
                     /locus_tag="VHX39_31950"
     CDS             complement(308..529)
                     /locus_tag="VHX39_31950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995805.1"
                     /translation="MAQIPPPSDALWDRLVSGALAHRFSLFAANMALARAIRIAASEP
                     ARKPAMIAELHQFFARFPGQLAPELQGLK"
     gene            complement(698..>2403)
                     /locus_tag="VHX39_31955"
     CDS             complement(698..>2403)
                     /locus_tag="VHX39_31955"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3995806.1"
                     /translation="AQTLDNIFIIHGGTPTLEGKPSAAANADGRLLTDIIKDALRNAE
                     DGVVSYTFPKPGETERQPKMSYVARFRPWDLVLVSGSYLDDLNIAFRDMMVRLGIISA
                     AITAIMLLAAWSINRDIAGSLGRLKTAMQRLAGGELATDIPGASRRDEVGAMAGAAAV
                     FKDNMVKMVDLAAAQDQERLRALAEKQDALNSMADKIEAETTTALQQVAARTSTMAST
                     ADEMSESATRTGKSAEGAASASAQALANAQMVASAAEQLSASIRQIGVQVAQSNEIIG
                     RAVVAGTETRATMAAMNEQVTRIGAVADMIGEIAAKTNLLALNATIEAARAGDAGKGF
                     AVVASEVKALASQTARSTQEITRHIDEVREATGASVAAVARIEQTIGEVNAIAGSIAD
                     AVDQQGAATAEIARNVSETAVAAHEMANRATEVLAEAEQTGIHAGDVRDDATSLNAAL
                     GELRQAVNRVVRTATPEVDRRHDPRYEVDLACRIIAGVQTFEAHVADLSDGGAYIQGA
                     PVLPVGSRGSLDIASVGFPLPFDVRKSGVDSLHVRFALDAATAARFSGLPARLGRPQA
                     A"
BASE COUNT          438 a          781 c          730 g          454 t
ORIGIN      
        1 ccgggcacca cgatcagcga aaatccatgt tttggcgccg cgccgggaat gtcggccaac
       61 tgatccgagg tcacgaaacc aatttcgacc tcacccacct cgggcggcaa ttcggtgacg
      121 aacacacgct tgcgatcagc ctgaccacct tcggcggtca gaaaatacgg gatcgtccca
      181 ccgatccagt cgcctcggcc caaccgagca agcgctgccg catcaccggc gatatgcaga
      241 cgcttgccgg ccatgattaa ccggttcgct tcgtcaacag aatttagcat cgcagagaga
      301 cctccggtca tttcagccct tgcagctccg gcgccaattg gccggggaac ctggcgaaga
      361 actgatgcaa ttccgcgatc atggcgggtt tgcgggcagg ttcgctcgca gcgatgcgga
      421 ttgcgcgagc cagcgccatg ttggcagcga acaaagaaaa ccgatgggcc agagcgccac
      481 tcaccagtcg gtcccagaga gcgtcggagg gcggggggat ctgagccatg cgaaacctgc
      541 cgtactgcct aacccggctt acggtgtccc gattaacaac tcgttggtcc aggggttaag
      601 aatttgctga tgcaaggcgg tgagcccgaa ggtcgtggcg ctttgacgat ccacggtgac
      661 ggcgttgctg ttccgttata cccgtgggca aagcggttca cgcggcttgc gggcggccta
      721 gccgcgccgg caacccgctg aagcgcgccg cggtcgccgc gtccaaagca aaacgcacat
      781 gcaacgagtc aacgccgctt ttacggacgt cgaacggcag cggaaaaccg acgctcgcga
      841 tatccagcga gccgcggctg ccaaccggca ataccggcgc gccttggatg taagcgccgc
      901 cgtctgacag gtcggcgaca tgcgcttcga aggtctgcac gccggctatt atccggcagg
      961 ccagatcgac ctcgtagcgt gggtcgtggc gccgatcgac ctccggcgtc gctgttcgca
     1021 caacacggtt caccgcctga cgcagttcgc ccaaagcggc gttcagcgac gtagcgtcat
     1081 cgcgcacatc gccggcatgg atgccggttt gctcggcctc cgccagaact tctgtggcac
     1141 ggttcgccat ttcatgggcc gcgaccgcgg tctcggacac gttgcgggcg atttctgccg
     1201 tcgccgcgcc ttgctggtcc accgcgtcgg caatcgaacc ggcgatggca ttgacctcac
     1261 cgatggtttg ctcgatccgc gccaccgcgg caaccgaggc gccggtcgcc tcgcgcacct
     1321 catcgatatg ccgcgtaatc tcctgggtgg agcgagcagt ctgggaggcc agcgccttca
     1381 cctcggaggc gaccacggcg aagcctttgc cggcgtcgcc ggcgcgggcg gcctcgattg
     1441 tggcattcag ggccaacagg ttggtcttgg cggcgatctc accgatcatg tcggcgaccg
     1501 ccccgatgcg ggtcacctgc tcgttcatcg cggccatggt cgcacgggtc tcggtaccgg
     1561 cgaccaccgc acgaccgatg atttcgtttg attgcgccac ctgcacgcca atttggcgga
     1621 tcgaggcgct gagctgctcc gccgcactcg ccaccatttg tgcattggcc aacgcctggg
     1681 ccgaagcgga agccgctccc tcggccgact tgccggttcg tgtcgcggac tcgctcattt
     1741 catccgcggt cgacgccatg gtggatgttc gggcggcaac ctgctgcaac gccgtcgttg
     1801 tctcagcttc gattttgtct gccatgctgt tcagggcgtc ctgtttctcc gccagcgcac
     1861 gcagacgctc ctggtcttgg gccgcagcga gatcgaccat cttcaccata ttgtctttga
     1921 acacggctgc agcgccggcc atggcgccaa cttcatcccg gcgggaggcg cccggtatgt
     1981 cagtggccag ctcgccaccg gcaagccgtt gcatggccgt cttcagccgg cccagagagc
     2041 ccgcaatatc gcgattgatc gaccacgcgg cgagcaacat gatcgcggta atggccgcgc
     2101 tgatgatacc gagccggacc atcatgtcgc ggaacgcgat attcagatca tcgagatagg
     2161 aaccggaaac aagcaccaga tcccacggcc ggaagcgtgc cacataggac attttcggct
     2221 gccgctccgt ctctccgggt ttgggaaacg tatatgatac cacgccatct tcggcgttac
     2281 gcagggcatc tttgatgata tcggtcaaca gcctgccgtc ggcattcgcg gctgccgacg
     2341 gcttgccttc caaagtcggc gtgccaccgt gtattatgaa gatattatca agcgtttggg
     2401 cat
//
LOCUS       DATAVD010001662         3802 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2205516, whole genome shotgun sequence.
ACCESSION   DATAVD010001662 DATAVD010000000
VERSION     DATAVD010001662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3802
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2205516"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..634)
                     /locus_tag="VHX39_31960"
     CDS             complement(<1..634)
                     /locus_tag="VHX39_31960"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HEX3995807.1"
                     /translation="MARTLLSVAVLAGVGVAARAQHTADSSTVLPPGALQEIAQVEAE
                     IDRIEAATLARLQAVPDNQPQKIELLGKAMLYDKQLSVNRNEACAFCHMPETGFTGPV
                     SALNKTTGSYPGSVRTRFSNRVPQTHSYAALAPMLHYNPGQGDLVGGNFWDMRATGRR
                     LGNPAAEQAEGPPTNPVEMALPDAACAVYRASQRPYRGLFERIWGVQAFVI"
     gene            complement(764..2332)
                     /locus_tag="VHX39_31965"
     CDS             complement(764..2332)
                     /locus_tag="VHX39_31965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004273562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEX3995808.1"
                     /translation="MIEQAQQRDPPIPLKTWIAVGGALIGAFMAVLNIQITNASLPYI
                     EGGIGTGGINGAWVITAYLIGEIIVIPMTDFLSRVFSLRRYLIVNTALFLIFSAACGQ
                     ASSLSEMIVLRALQGFSGGVMIPLAFTIIVAMLPPSKRPVGLAGFAITATFAPAIGPT
                     IGGWLTDNYGWPTIFYVNLAPGAVMLTALIYALPRAPMQLSLLRHGDWLGIALMAVGL
                     AALQTVLDEGTVLDWFGSPFIVKLSLLSGVTLTAFVAVELLVKQPLANLRLFTRRNFA
                     FGTLGNFLLGFALYGSAFLLPQYLSVSQGFDAEQIGEVMAWTGLPQLVVIPFVPYMMK
                     HIDPRALVGTGLVVFAVSCFMNLHLDTDYAAPQLLIPDVTRALGQAIVMTPLSAIAMV
                     GISPAEAGGASGLFNMLRNLGGAIGTSALETFFTKREQYHSFVINSDVSLLQPATRTR
                     LAELQQYFVQHGTPDPAGAMHEAIVAIGDIVRAQATIMGYADCFALLGVVLVGALGAI
                     AMLQKGASTAGGAH"
     gene            complement(2339..3493)
                     /locus_tag="VHX39_31970"
     CDS             complement(2339..3493)
                     /locus_tag="VHX39_31970"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX3995809.1"
                     /translation="MDGGTTIALTALRSNDSDISSEELSVGRDLTGQTTSRSRRWPVR
                     QILIGLAALIVLAGASFYGHSYWTTGQFLVSTDDATVDAHSVVISPKISGYIADVAVE
                     DNETVHAGQILARIDDRDYRTAVAAAQADVASAEAGIRHTEQQVDQQQLTVVAARAAV
                     TTDQAALVFSRQQLTRYSGLAHIGAGTVQDSQQWQADITEKEAAVARDTAQVGVAQKQ
                     IDVFGAALEQAKAMLAQQQAALQQAQLNLSYTSITAPVDGTVGNRSLRVGQYVQAGTD
                     LMEVVPLSAVYVTANYKETQLTDVRPGQPVTIAVDTFPGVQVHGFVNSIAPASGEEFA
                     LLPPDNATGNYTKIVQRIPVKITIDPHDKLLGSLRPGMSVEPTIDTKAKG"
BASE COUNT          772 a         1180 c         1165 g          685 t
ORIGIN      
        1 gaatgacaaa agcctggacc ccccagatcc gttcgaacaa cccgcgataa ggtcgctgcg
       61 aggcgcgata aaccgcgcag gctgcatccg gcaatgccat ctcaaccgga ttggtcggcg
      121 gaccctcggc ctgctccgcc gccgggttac cgaggcggcg cccagttgcg cgcatgtccc
      181 agaagttgcc gccaaccaga tcgccctgac caggattgta gtgcagcatg ggcgcgagcg
      241 cggcgtagct gtgagtttgc ggcacgcggt tgctgaaccg ggtgcgcacc gacccgggat
      301 aggaccctgt cgtcttgttc agtgcggaaa ccgggccggt gaacccggtc tccggcatat
      361 ggcagaaagc gcaggcctcg ttccggttta ccgaaagctg cttgtcgtac agcatcgcct
      421 tgccgagcaa ctcgattttc tgtggctggt tgtccggcac cgcttgcagc cgcgccagcg
      481 ttgccgcctc gatgcgatcg atctccgcct cgacctgggc gatttcctgc aatgccccgg
      541 gtggcagcac cgtgctgcta tcggctgtat gctgagcgcg cgccgcaacg ccgacgccgg
      601 ccagcaccgc cacactcagc agcgtccgcg ccatgttcac gtcggcccga cctcccggca
      661 atgacgacct gagcaacatt gcatatggcg tgctcggaag tctttggcga ttatggcacc
      721 aggcctgaga agatctgaga aagaccggaa cgccggtccc gcatcaatgc gcaccaccgg
      781 ccgtgctggc gcccttctga agcatggcga tcgcgccgag agcgcccacg agcacgaccc
      841 ccagcagtgc gaagcagtcg gcatacccca tgatcgtcgc ctgggcgcgg acaatgtcgc
      901 caatcgcgac tattgcctca tgcatggcgc cggcggggtc cggtgtgccg tgctgaacga
      961 aatattgctg cagttccgcc agtcgtgttc gcgtcgcggg ttgcaatagc gagacatcgg
     1021 aattgatgac gaacgaatga tattgttcgc gcttggtgaa gaaggtttcc aacgccgatg
     1081 tgccgatcgc accgccaaga ttgcgcagca tgttgaacaa gcccgacgct ccaccggcct
     1141 ctgccgggga gatgccgacc atggcgattg ccgaaagcgg cgtcattacg atcgcctgtc
     1201 caagcgcccg cgtgacgtcg ggtataagca actgcggcgc ggcatagtct gtgtcgaggt
     1261 gcaaattcat gaaacaactg acagcgaaca ccacgaggcc ggtgcccacc agcgctcgcg
     1321 ggtcgatatg cttcatcatg tagggtacga atggaatgac gacgagttgc ggcaatcccg
     1381 tccaggccat cacctcgcca atctgctccg cgtcgaaacc ctgggacacc gacaggtact
     1441 ggggcaacag aaaggcagac ccgtaaagtg cgaagccaag caagaagttg ccaagcgttc
     1501 caaaggcgaa attgcggcgg gtgaacaggc ggaggttcgc cagtggctgc ttaaccaata
     1561 gttcgaccgc gacgaacgcc gtcagtgtaa cgccggagag cagactcaac ttaacgatga
     1621 acggagaacc gaaccagtcg agcactgtcc cttcgtcaag caccgtctgc aaggcggcga
     1681 gacccaccgc catcagcgcg atgcccaacc agtcgccgtg gcgcaacagg ctcagttgca
     1741 tcggcgcccg ggggagcgcg tagatcagtg cggtcagcat caccgcgccc ggggcaaggt
     1801 tgacgtaaaa gatcgtcggc cagccgtagt tatcggtgag ccacccgccg atcgtcggtc
     1861 cgatcgccgg cgcgaaggtt gccgtgattg cgaagccagc gaggcccacc ggccgcttcg
     1921 acggcggcag catggcgacg atgatggtaa atgccagcgg gatcatcacg ccgccggaga
     1981 acccttgcaa ggcccgcaac acgatcattt ccgacaggct ggacgcctgt ccacaggcgg
     2041 ccgaaaagat cagaaacagt gccgtgttca cgatcagata gcggcgcaag gaaaacacgc
     2101 gactgaggaa gtcggtcatc ggaatgacga tgatctcgcc gatcagatac gcggtgatga
     2161 cccaggcgcc gttaatgcca cccgtgccaa tgcctccctc gatatacggc aaggaggcgt
     2221 tggtgatctg aatgttcagt accgccatga acgcgccaat aagagcgccg ccaacggcga
     2281 tccaggtttt gagcggaatg ggcggatccc gctgctgtgc ctgctcgatc atgccacgtc
     2341 agcctttcgc ttttgtatcg attgtcggct cgaccgacat gcccggacgc aggctgccaa
     2401 gcagcttgtc gtgcggatcg atggtgatct ttaccggaat gcgctgcacg atcttggtgt
     2461 aattgccggt ggcgttatcg ggcggcagca acgcgaattc ctcgccgctg gccggagcga
     2521 tactgttgac aaagccatgt acctgcacgc ccggaaacgt gtccaccgca atggtgacag
     2581 gctggccggg ccgcacgtcg gtgagttgcg tctccttgta attcgccgtg acgtaaaccg
     2641 ccgaaagggg cacgacctcc atcaggtccg tgccggcctg gacatactgc cccacgcgca
     2701 gcgagcggtt tcccaccgtg ccgtccaccg gagcggtgat gctcgtataa ctgagattga
     2761 gttgagcctg ctgcaacgcc gcctgctgct gcgccaacat ggctttcgcc tgctcgagcg
     2821 cggcgccgaa cacgtcgatc tgcttctgcg ccacgccgac ctgagcggta tcgcgcgcta
     2881 ccgccgcctc tttttcggtt atatcggcct gccattgttg cgagtcctga accgtgccgg
     2941 cgccgatgtg agcaagaccg ctgtaacggg ttaattgctg tcgcgaaaag accaaggccg
     3001 cctgatcggt cgtgacagcg gcgcgtgccg ccaccactgt caactgctgc tgatcgactt
     3061 gctgttccgt atgtcggata ccggcctcgg cggaagcaac atccgcctga gccgcggcaa
     3121 ctgccgtgcg gtagtcgcga tcgtcgatgc gcgccaggat ctgcccggcg tggacagtct
     3181 cgttgtcctc caccgcgacg tcagcaatat aaccggagat tttggggctg ataacgacgg
     3241 aatgtgcatc caccgttgcg tcgtcagtag agaccagaaa ttggcccgtg gtccaatagg
     3301 agtggccata gaagctggca ccggccagca cgatcagtgc cgcaagtccg atgagaattt
     3361 ggcgcaccgg ccaccgtcgg ctgcgcgagg tcgtctggcc ggtcaggtcc cggccgaccg
     3421 acaactcttc actggaaata tcgctgtcat tggagcgtag cgcagtcagc gctatagtgg
     3481 tcccgccgtc catctgatcg gtctcccttc gacatcatag ctcggggcgc aaagcagtgt
     3541 cgtgcgctcc cgcacctgga tggacgcgcc gcttctcctg ccgtgctggc acgccattcg
     3601 ccaccaaacg tgggtcggcg aaagcagcga tgaaaccagc aaattccgaa caagtactat
     3661 tcaggtagcg cttaaatgaa acgcggggac agttcatgga ccgaaggcca gattcggcac
     3721 accgatcccg gctgcttgcc cgctacgtcg ggtagccgca tactgaggcg tgtgtcgagg
     3781 gtgggcataa ggaaatcagg ca
//
LOCUS       DATAVD010001663         2704 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1832129, whole genome shotgun sequence.
ACCESSION   DATAVD010001663 DATAVD010000000
VERSION     DATAVD010001663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2704
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1832129"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1703
                     /locus_tag="VHX39_31975"
     CDS             <1..1703
                     /locus_tag="VHX39_31975"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3995810.1"
                     /translation="QTGRKATECGGVPEQTKKSGGDTFDYVIVGSGAAGSVLCRRLTE
                     DPGVTVCVLECGPPDRHPFIHIPAGFIKMLFNPAYTWQFQTEPGDGIGGRRIPTTQGR
                     TLGGSSSINGMIYNRGQRADFDNWAQRGNRGWGYVDVLPYFKRTERRIGIGDDRIHGR
                     AGDLPVTDMDWFHPVCDAFMNGAQELGIPRCEDYNSGDQQSGVGYFQRLINRGYRHSA
                     ARVFLHPARRGGQLDVRTDARASRILFDGTRVKGVHYVDDRDRTTFHQVFARKEVIIS
                     SGTANTAKLLQISGVGPAWLLQQLGVPVVADLPVGENFRDHYSARIVARVKNIRTINE
                     MSKGLGLAGQIARWALGKPSILAVSPSLVHWFWKSEDTMQQPDLQGVFSPASYKQGFV
                     GLLDDYPGMTAGVWQHRPESIGYVRARSTDPFEDPAIQPNYLQDPIDQRALLNGMKLA
                     RRLLHTEALAPYFEQDELPGPAVHSDDEWMDFARQYGSTAYHLIGTARMGPPTDRTSV
                     VSDRLLVHGLQGLRVVDASIMPNMPSANTYSSTMMIAEKASDMIRRREPLAQVEGIAA
                     "
     gene            1700..2518
                     /locus_tag="VHX39_31980"
     CDS             1700..2518
                     /locus_tag="VHX39_31980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020591311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEX3995811.1"
                     /translation="MTQQDRAARFLALHNAPDAFVIANAWDAGSAKLLTSLGFKALAT
                     SSGAQAGILGRVDGKVNREEALAHAKAIVDATELPVSADLEKGFGDSPDDAARTITLA
                     AGIGLVGGSIEDASGDPARPLYDPAQAAERVAAAVQAARSVGFPFVLTARAEGFLRGN
                     PDLDDTIRRLQAFELAGADVLMAPGLPDLAAVRTVCAAVGKPFNFMAGINGRSFTVAE
                     LADAGVKRISLATSLFRAAMTGLLNAATEVRDHGTFKYLDTSLPTPDWNRFMTG"
     gene            2547..>2704
                     /locus_tag="VHX39_31985"
     CDS             2547..>2704
                     /locus_tag="VHX39_31985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003624557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3297 family protein"
                     /protein_id="HEX3995812.1"
                     /translation="MSDTPPDRLCNDPASPFYNEAALVRGIGVRFKGIECTTVEEYCI
                     SEGWVRMAV"
BASE COUNT          510 a          794 c          869 g          531 t
ORIGIN      
        1 tacaaactgg gcggaaagca acggagtgtg gcggcgtgcc ggaacaaacg aagaaaagcg
       61 gcggggacac gttcgattac gtgatcgtcg gcagtggcgc ggccgggtcg gttctgtgcc
      121 ggcgactgac ggaggatcca ggcgtcacgg tatgcgtgct ggaatgcggc cctcccgacc
      181 gtcacccatt catccacatc ccagccggct tcatcaagat gctgttcaac ccggcctaca
      241 cctggcaatt ccagaccgaa ccgggcgacg gcatcggcgg ccgccgcatc ccgacgacgc
      301 agggccgcac cttgggcggg tcaagctcga tcaacggcat gatctacaat cgtggtcagc
      361 gcgcggattt cgataactgg gcgcaacgtg gcaatcgcgg gtggggctat gtcgatgtgc
      421 tgccgtattt caaacgcacc gagcgtcgga tcggcatcgg agacgaccgc atccatggac
      481 gcgctgggga tctgccggtg accgacatgg actggttcca tccggtgtgc gacgccttta
      541 tgaacggggc gcaggaactg gggattccgc gctgcgagga ctataattcg ggggatcaac
      601 agtccggcgt tggttatttt caacggctga tcaaccgcgg ttatcgccat tccgcagcgc
      661 gtgtgttcct gcatccggcc cggcggggcg gccaattgga tgttcggacc gacgcacgtg
      721 catcacgcat tctgttcgac ggcacccgtg taaaaggcgt gcattatgtc gacgaccgcg
      781 accgtacgac gtttcaccag gtcttcgccc gcaaggaggt gatcatctcc agcggtaccg
      841 ccaacactgc caaattgctg cagatttctg gagttgggcc ggcgtggttg ttgcaacaac
      901 tcggcgttcc ggttgtcgcc gatctaccgg tgggagagaa ctttcgcgat cattactcgg
      961 cacggatcgt cgcccgggtg aaaaacatcc gtaccattaa cgaaatgtcc aaaggccttg
     1021 ggctcgcggg ccagatcgcc cgttgggcgt tgggaaaacc gtcgatcctg gcggtcagtc
     1081 cctcgctggt gcattggttc tggaagtccg aggacaccat gcagcagccc gatctgcaag
     1141 gcgtgttttc ccccgccagc tataagcaag ggttcgtcgg cttgctggac gactatcccg
     1201 ggatgaccgc gggcgtctgg cagcatcggc cggaaagcat cggttatgtg cgcgcccgct
     1261 ccaccgatcc gttcgaagat ccggcgatac agccgaacta tttgcaggat ccgatcgatc
     1321 agcgcgcgct gctgaacggc atgaagctgg cacggagact gttgcatacc gaggcactgg
     1381 cgccgtactt cgagcaggat gaacttcccg gtcccgcggt acattccgat gacgagtgga
     1441 tggactttgc gaggcagtat ggatcgaccg cgtatcatct gatcggcacc gcgcggatgg
     1501 ggccgcccac cgatcggaca tccgtggtca gcgatcggtt gctggtgcac ggattgcagg
     1561 gcttgcgcgt ggtcgatgca tcgatcatgc cgaacatgcc gtcggccaac acctatagtt
     1621 cgaccatgat gatcgccgag aaagcgtcgg atatgatccg gcgccgcgaa ccgctcgcgc
     1681 aggtggaggg aattgccgca tgacccaaca agaccgcgct gccagatttc ttgcattgca
     1741 caacgcgcct gatgcgtttg tcattgccaa tgcctgggat gccggatcgg cgaagctgct
     1801 gacctcactt ggcttcaagg cgctggcgac ttcgtccggc gcgcaggccg gtattcttgg
     1861 ccgtgtcgat ggcaaagtga atcgggaaga ggcgctggca cacgccaagg ccatcgtcga
     1921 cgccacggaa cttccggtat ctgccgacct ggagaagggg tttggtgact cgccggacga
     1981 tgccgcgcgc acgatcaccc tcgccgcggg catcggcctc gtcggcggct cgatcgagga
     2041 cgcatcaggc gatccggcgc gtccattata cgatccagcc caggccgcgg agcgtgtggc
     2101 ggccgcggtg caggcggcgc gctcagtcgg gtttccattc gtgttgacgg cgcgcgctga
     2161 aggttttctg cggggtaatc ctgatctgga cgatacaatc cgccgcctgc aggccttcga
     2221 gttggccggt gccgacgtgc tgatggcgcc gggtctgccg gatcttgcgg cagtgcgcac
     2281 ggtttgcgcc gcggtcggca aaccattcaa ttttatggct gggatcaacg gacgctcctt
     2341 taccgtggct gaactggcgg acgccggggt gaagaggatc agtctcgcga cgtcattgtt
     2401 ccgtgccgcg atgaccggtc tgctgaatgc agcgaccgag gtgcgcgatc atggaacgtt
     2461 caaatatctc gataccagct tgccgacgcc ggactggaac cggttcatga cgggttgatc
     2521 cggaactctc aactgaaagg tagccaatgt cagatacgcc acccgatcgc ctgtgcaacg
     2581 atcccgccag cccgttttac aatgaagccg cgttagtccg cggcatcggc gttcgcttca
     2641 agggcatcga atgcacgacc gttgaagagt attgcatcag tgagggctgg gtccgtatgg
     2701 ccgt
//
LOCUS       DATAVD010001664         2999 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_162210, whole genome shotgun sequence.
ACCESSION   DATAVD010001664 DATAVD010000000
VERSION     DATAVD010001664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2999
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162210"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            91..993
                     /locus_tag="VHX39_31990"
     CDS             91..993
                     /locus_tag="VHX39_31990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX3995813.1"
                     /translation="MTILKVHHVTTYAYRRPVGFGEHRILFRPRDSQDQRLLKANLRI
                     VPAPSELFWIHDVFGNSVAVANFDGEADGLRFETDIVLDHTPQLGLHFRAEERARSWP
                     FAYDEETLPDLEALMRRQYPDDGRTAAWAQRFVAHTGPTNTARLLEAMTVAIKAEFKY
                     ARRTNPGTQTPAMTLDSLSGTCRDFALLMMEAARSLGFAARFVTGYIYVPSRDKSELL
                     GGGATHAWTQVYLPGAGWVEFDPTNGIIGNRDLIRVGVARDPRQAIPLWGTHTGGRND
                     SLGMTVQVNVTSADSETERSAIPA"
     gene            1003..1821
                     /locus_tag="VHX39_31995"
     CDS             1003..1821
                     /locus_tag="VHX39_31995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEX3995814.1"
                     /translation="MQIKAGFSLTYDCPKPTPMLLCVNIHPSRRSDLLTPQVIRFSPQ
                     MESWDYVDGFGNVCTRITAPTGRTTVATEFEIYDAGTPDHVPFDAVQHDIRDLPDEVL
                     VFLLGSRYCETDRLSNVAWQMFGATAPGWPRVQAILDYVHDHIHFDYQRADPTRSAYG
                     AYNEGVGVCRDFAHLALTLCRCMNIPARYCTGYLGDIGIPPMPGPMDFSGWFEVFLGG
                     HWYTADARSNKPRIGRVLMAIGRDATDVAISTQFGPATLSSFNVVTDEVIAAHA"
     gene            1814..2563
                     /locus_tag="VHX39_32000"
     CDS             1814..2563
                     /locus_tag="VHX39_32000"
                     /inference="COORDINATES: protein motif:HMM:NF016873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HEX3995815.1"
                     /translation="MPEQADWPEPVEVLNEAGSSAIVLLCEHASNHIPPEYAGLGLPA
                     DELRRHIAWDIGAAAVTRRVSSLLDAAAFLGTYSRLLIDLNRPLDAPDSIPVRSEATD
                     IPDNAQLTITEKSRRAELIFAPFHHRVARSLSDRQAARRPTSLVSIHSFTPTFFGVDR
                     LWHAGVLFDRAAKFADAVLEQMRSPGLMIGINEPYKTDRLGDYAIPIHGDDRSIPAIM
                     IEIRNDLIAEAVGVESWASRIAGAVSAVDDL"
     gene            complement(2651..>2999)
                     /locus_tag="VHX39_32005"
     CDS             complement(2651..>2999)
                     /locus_tag="VHX39_32005"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEX3995816.1"
                     /translation="PDVLLDAAPVNLQSGTVSALPDLVAIAGGDATRIITVADAAGAA
                     RTGARTGAENIKSEGGFKLRWDVLGEYGQLAAKGRFSIPVARTFALEDWREALAISLA
                     GRARGKLVLVPRN"
BASE COUNT          539 a          977 c          921 g          562 t
ORIGIN      
        1 cgggtccatg gaaagaaaag aacgctcgca ggcaccgttc gggctaaagc tggatggtcg
       61 cctcgactcc cagctggcaa gcaacgctcg atgacaattc tcaaggtcca ccacgtcacc
      121 acttacgcgt accggcggcc ggtcggtttt ggcgaacacc gcattctgtt tcggccacgc
      181 gacagccagg accagcggtt gctcaaggct aacctgagga tcgttccggc gccgagcgag
      241 ctgttctgga tccatgacgt gtttggtaac agcgtggcgg tcgcaaactt cgacggtgaa
      301 gccgatggcc tccggttcga gaccgatatc gtgctggacc acacgccgca gcttggattg
      361 cattttcgcg ctgaagagcg ggcgaggagc tggccatttg cgtacgacga agaaacgctg
      421 cctgacctcg aggcgctgat gcgtcggcaa tatcccgatg atgggcggac ggccgcatgg
      481 gcgcagcggt tcgttgcgca caccggtccc accaacacgg ctcgcttact ggaggcgatg
      541 acagtcgcga tcaaggccga gttcaaatac gcgcgccgaa ccaatcctgg cacccagacg
      601 ccagcgatga ccctggatag cctgagcggc acctgccgcg attttgcgtt gctgatgatg
      661 gaggccgccc ggtcactcgg gttcgcggca cggtttgtca ccggctatat ctacgtgcca
      721 tcgcgcgaca agtcggaatt gctcggcggc ggcgcaaccc acgcgtggac ccaggtgtat
      781 ctgcccggtg caggatgggt ggagttcgat cccaccaatg gcatcattgg caaccgcgac
      841 ctgatccgcg tcggtgtcgc tcgcgacccg cggcaggcga tcccgctctg ggggacccac
      901 acgggcggac gcaacgactc gctaggcatg accgttcagg tcaatgttac ttccgcagac
      961 tcggagacgg aacgatcggc cattccggcc tgaaggattc ttatgcagat caaggccggg
     1021 ttttccctca cctatgattg tcccaagccc accccgatgc tgctctgtgt caacatccat
     1081 ccgtcgcgcc ggtccgacct gctgacccca caggtcatcc ggttctcgcc gcaaatggag
     1141 tcgtgggact atgtggacgg gttcggcaat gtatgcaccc gcattaccgc acccaccggt
     1201 cgcacgaccg tcgccaccga gttcgaaatc tatgacgccg gcacgcccga tcacgtgcca
     1261 ttcgatgccg ttcagcacga tatccgcgat ctgccggacg aggtgctcgt gttcctgctg
     1321 gggtcgcgct attgcgaaac cgaccgcctg tcgaatgtcg cctggcagat gttcggcgca
     1381 accgcgccgg gatggccgcg cgtccaagcc atcctcgatt atgtccacga tcacatccac
     1441 ttcgactacc agcgcgcgga cccgacgcga tccgcgtacg gcgcctataa cgagggggtc
     1501 ggcgtctgcc gagacttcgc gcatctggct ctgacgctct gtcgttgcat gaatattccg
     1561 gcgcgctatt gcaccggcta ccttggcgat atcggtatcc cgccaatgcc cgggccgatg
     1621 gatttctccg gatggttcga ggtctttctc ggcggtcact ggtacacggc cgacgcccgc
     1681 agcaacaagc cgcgcatcgg gcgcgtcctg atggccatcg gacgagatgc aaccgatgtt
     1741 gcgatctcca cccagttcgg ccccgccacc ctcagttcgt tcaatgtcgt gaccgacgag
     1801 gtcatcgccg cgcatgcctg agcaggcgga ttggcctgag ccggtcgagg ttctcaacga
     1861 agcgggatca tccgcgatcg tgctgctgtg cgagcatgcg tcgaaccaca tcccgccgga
     1921 atatgccggc ctcgggctgc cggccgacga actgcggcga cacattgcct gggacatcgg
     1981 cgcggcggcg gtcacgcgtc gagtttcgag cttgctcgac gcagcggctt ttctcggcac
     2041 ctattcgagg ttgctgatcg atctcaaccg gcctctcgat gcgcccgaca gtattcccgt
     2101 gcggtcggag gcaaccgaca ttccagacaa tgcccagttg acgatcacag agaagtcgcg
     2161 ccgcgccgag ttgattttcg cgccgttcca ccatcgcgtg gccaggtccc ttagtgaccg
     2221 ccaagccgca cggcgaccaa cgtcgctcgt cagtatccac agtttcacgc caacgttctt
     2281 cggtgtcgac cgtctttggc acgcaggcgt gctgttcgac cgcgccgcca aatttgcaga
     2341 cgccgtcctc gagcaaatgc gcagccccgg tctgatgatc ggcatcaatg agccgtacaa
     2401 gaccgaccgg ctgggcgact atgccattcc gatccacggt gacgaccgca gtatcccagc
     2461 aatcatgatc gagatccgca atgacctgat cgcagaagcg gtcggcgtcg agagctgggc
     2521 ctcgcgaatt gccggagccg tctccgccgt cgatgatttg tagcatgccg ccttcgccga
     2581 acggcaattc ggcccggtca ggcagacctg gcttcattcc tgaagatcgt ggtgccgggc
     2641 gcaagctggc tcaattgcgg ggcaccagga cgagcttgcc gcgggcacgg ccggcgagac
     2701 tgatggcgag cgcttcgcgc cagtcctcca gggcgaaggt ccgcgcgacc ggtatcgaga
     2761 agcgtccttt ggccgccagc tgcccgtatt caccgaggac gtcccagcga agcttgaagc
     2821 cgccttcgga cttgatgttc tccgctccgg ttcgtgcgcc ggtcctggcc gcgccggcgg
     2881 cgtcggcgac ggtgatgatg cgcgtggcgt cgccaccggc gatcgccacc aggtcgggca
     2941 gcgcgctgac agtgcccgat tgcaagttga cgggcgccgc atcgagaagg acatcgggc
//
LOCUS       DATAVD010001665         4699 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3133361, whole genome shotgun sequence.
ACCESSION   DATAVD010001665 DATAVD010000000
VERSION     DATAVD010001665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4699
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3133361"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..313
                     /locus_tag="VHX39_32010"
     CDS             <1..313
                     /locus_tag="VHX39_32010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995817.1"
                     /translation="FPTRALASETAAPVARSQAEPTEAEARLTRALIGLNDAVTAQRA
                     AIAAWKSSLGDLSTATGRLGSSLRTYNDSLGQLDARVKTLRTEAVKLEAWADDVIARE
                     V"
     gene            373..1002
                     /gene="eda"
                     /locus_tag="VHX39_32015"
     CDS             373..1002
                     /gene="eda"
                     /locus_tag="VHX39_32015"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008675 -
                     2-dehydro-3-deoxy-phosphogluconate aldolase activity
                     [Evidence IEA];
                     GO_function: GO:0008700 - 4-hydroxy-2-oxoglutarate
                     aldolase activity [Evidence IEA];
                     GO_process: GO:0009084 - glutamine family amino acid
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009255 - Entner-Doudoroff pathway through
                     6-phosphogluconate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HEX3995818.1"
                     /translation="MPHELLDRFRTAQVIPVVRTRTAHAAATAVAWLRDAGLRIFEIT
                     MTVPDAPALIRDLASDKALLVGAGTVPDAATAAECLQAGARFIVTPWVDPALAEPCHA
                     ANAALILGAMTPTEVRAALTAGADAVKIFPAASVGGPAHIKALVSVFPGVAFCPTGGV
                     EPGNFAAYLAAGAAFVGIGGALVDERRIEAGDREAIFSAGRSVTRTTPQ"
     gene            999..1958
                     /locus_tag="VHX39_32020"
     CDS             999..1958
                     /locus_tag="VHX39_32020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HEX3995819.1"
                     /translation="MTVELLCMGEPMLEFNQLPLQPDGARHYLEGHGGDTSNAAVAAA
                     RQGAAVGIITGLGWDMPGDSFMALWQREGIDTSTVTRSDRYPTGVYFVTHDQSGHHFL
                     HYRTNSAAAMFGPEDVPDKAISQARMLYLSGISQGISTTACDATLVAMDVARRHGVKI
                     AYDTNYRPKLWPPARAAAMMRAAMEAVDYALPGIDDVQTLTGLTDPDAMLDYYLKLGP
                     GVVVLRMGEAGAYLATPEARIRIPALPVRTVDATGAGDTFCGSFLARILAGDSPEPAA
                     RYAAVAAALKCTGYGAVAPIPRPTQIADAMQAYEASEDGNLRS"
     gene            2035..2352
                     /locus_tag="VHX39_32025"
     CDS             2035..2352
                     /locus_tag="VHX39_32025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HEX3995820.1"
                     /translation="MRDEPGGPDGSFEERLQAARGRRGLDGPEKPKGFDPYGAEQSPM
                     GIGLRVGIELVAALVVAVAIGYGLDWLFGTKPILTAAFVPVGGAAGVWNVWRVFAPKT
                     GQR"
     gene            2357..3115
                     /locus_tag="VHX39_32030"
     CDS             2357..3115
                     /locus_tag="VHX39_32030"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEX3995821.1"
                     /translation="MAAEGHSSIDALSQFKLAPVFGHLGEQLHFSNANVMMLVAGALT
                     LLLMWVGMSPRAMIPGRLQSAAEMAYETVLNMCVEQIGHEGKKFFPFVFTLFFFILFG
                     NLMGVFPLLFTFTSHIAVTLGLSLFVFLLVTVVGLKEHGLHFFSYFVPKGIPIALLPL
                     LVIIEVISYLSRIISLSVRLFANMMAGHVMLEVFGAFVVMLGAAGGIYLVPAGLSFGV
                     NVILIGFELLVASLQAYVFAILTCIYLHDAVHLH"
     gene            3197..3427
                     /locus_tag="VHX39_32035"
     CDS             3197..3427
                     /locus_tag="VHX39_32035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007284348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit C family protein"
                     /protein_id="HEX3995822.1"
                     /translation="MDLASAKAIGAGIAVIALAGVGVGIGHIFAALISGVARNPAARD
                     RVFGLAILGFALTEAVALYALVIAFIILFAGG"
     gene            3452..4045
                     /locus_tag="VHX39_32040"
     CDS             3452..4045
                     /locus_tag="VHX39_32040"
                     /inference="COORDINATES: protein motif:HMM:NF012645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B'"
                     /protein_id="HEX3995823.1"
                     /translation="MSRLRRTAPLVAWVTGVASAVPCAARADTLPQMDFANVLTTYQV
                     LWGAVIFLILYILASRTALPKVAAVLEARAERIAGDLDDARISKARADAGIKAASDAT
                     AKARSEAQAAINGALETSKQAAASQAATLNERLDQQLKEAEGQIAAARGAALAALPGV
                     AADTAIALITRLTGAAPDPIRLSGAIDAAVAARAAGR"
     gene            4057..4572
                     /locus_tag="VHX39_32045"
     CDS             4057..4572
                     /locus_tag="VHX39_32045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEX3995824.1"
                     /translation="MHEEPGFFAEPRNWVIIAFFLFFIIFGRKLWGALAGMLDARAAS
                     VRAEMDEAARLKSEAQAMLKEAEAARAKALTDAKSLIDGAAAEAARVAEAARTEAEAS
                     AKRREQMALDRIAAAQKQAVDEVRTAAAELATIAARQVIAEGLSPESSAALIDQAIAQ
                     LPAALATRRAA"
BASE COUNT          802 a         1428 c         1563 g          906 t
ORIGIN      
        1 gttcccaacc cgcgcgttgg cgtcggagac ggcggctcct gtggcccgaa gccaggccga
       61 accgactgag gcggaagcga gattgacccg cgcgctcatc ggcctcaacg atgccgtaac
      121 ggcacagcgt gccgcaatcg ctgcctggaa atcgtcgctt ggcgatttaa gcacggcaac
      181 agggcgcctc ggttccagcc tacgcaccta caatgacagt ctcggtcagc tcgacgcgcg
      241 cgtaaaaacg ttgcgcaccg aagcagtgaa gctcgaggcc tgggccgacg acgttatcgc
      301 gcgagaggtc tgacccgcgc cacttgcgca attgcgtgcg gtttgttttt tgacgggcgg
      361 aggaaccgtc cgatgccgca cgaattactg gatcgatttc gcacagccca ggtcattccg
      421 gttgtacgca cgcggacggc acacgcggcg gcgaccgctg tcgcatggtt gcgcgacgcg
      481 ggactgcgta ttttcgaaat caccatgact gtgccggacg cgcccgcatt gatccgcgat
      541 ctcgccagcg ataaggcgct gctggtgggc gccggaaccg tgcctgacgc cgcgacagcc
      601 gccgaatgcc tgcaagccgg ggcgaggttc attgttaccc cttgggtcga tccggcgctg
      661 gctgagcctt gccatgccgc caacgccgcg ctcattttgg gcgcaatgac cccgaccgag
      721 gtgcgcgcgg cgcttacggc gggcgctgac gcagttaaaa tatttcccgc tgcctcggtc
      781 ggcggaccag cgcacattaa agcgctggtc agcgtgtttc ccggtgtcgc attctgtccg
      841 accgggggcg ttgagcctgg aaatttcgct gcctatctcg ccgccggcgc ggcattcgtg
      901 ggcatcggcg gcgcattggt ggatgagcgg cgcatcgagg ccggcgaccg cgaggcaatt
      961 ttctccgccg gtcggtccgt cacgagaacg acaccgcagt gaccgtcgaa cttctgtgca
     1021 tgggcgaacc gatgctggag ttcaatcaac tcccgctcca gccggatggc gcgcgacatt
     1081 atctggaagg gcacggcggt gatacctcga acgccgcagt agcggcagcg cggcaaggcg
     1141 ccgccgttgg gataatcacc ggtctgggct gggatatgcc aggcgatagt ttcatggcgc
     1201 tgtggcagcg ggaaggcatc gacaccagta cggtgacgcg gtcggaccgc tatccgaccg
     1261 gagtgtactt cgtcacccac gatcagtctg ggcatcattt cctgcattac cggacgaatt
     1321 ccgccgccgc gatgttcggg cccgaggacg tgccggataa ggcaatcagc caggctcgaa
     1381 tgctgtatct ttccggcatc agccagggaa tttccacgac ggcgtgcgat gcaactctgg
     1441 tggcgatgga tgtcgctcgc cggcatggtg ttaaaattgc ttacgacact aactatcgac
     1501 cgaaactgtg gccgccggca cgcgcggcag cgatgatgcg tgcggcgatg gaagccgtcg
     1561 actacgcgtt gccgggcatt gacgacgtgc agaccctgac cggcctcacc gacccggacg
     1621 ccatgctgga ttattatctg aaactcggtc ccggtgtggt tgtgttgaga atgggcgagg
     1681 ctggcgctta cctcgccacg ccggaggcac ggatccggat ccctgccctg ccggtgcgaa
     1741 cggtggacgc gaccggcgca ggcgacacgt tttgcggctc gtttctggcc cgtatcctcg
     1801 ccggcgactc acccgaaccg gcggcccgtt acgccgctgt ggctgccgca ctgaaatgca
     1861 ccgggtacgg cgcggtggca ccaattccgc gaccgacaca gattgccgat gcgatgcaag
     1921 cgtatgaggc atcggaggat ggcaacctac gttcttgact ccctatttgg ccgcctgtag
     1981 caagcccccg cttaccggcc cccgcttcac ggcgaggtta tggcaggagc gaacatgcgc
     2041 gatgaaccgg gcggcccgga cggctccttt gaggagcgac tgcaagccgc ccgcggcagg
     2101 cgaggcctcg atggccccga gaagccaaaa gggtttgacc cttatggcgc cgagcagtcc
     2161 ccgatgggga tcggcctgcg ggtggggatc gaactggtgg cggctctggt cgtggcggtt
     2221 gccatcggct acgggctcga ctggctgttt ggcaccaaac ccattctgac cgcggcgttc
     2281 gtccctgtcg gcggcgcggc cggggtgtgg aatgtgtggc gtgtcttcgc gccgaagacg
     2341 ggacagaggt gagctggtgg cggccgaagg acacagtagc atcgacgcgc tgagccagtt
     2401 caaactggca ccggtgttcg gccatctcgg cgagcaactg catttcagca atgcgaacgt
     2461 gatgatgctt gtggccggcg cgctgacgct gttgctgatg tgggtcggca tgagcccgcg
     2521 ggcgatgatc ccgggccggc tgcaatctgc tgccgaaatg gcctatgaga ccgtgctgaa
     2581 catgtgtgtc gagcagatcg gccatgaggg caaaaaattc ttcccattcg tattcacgct
     2641 gttctttttc attctgttcg gcaatctgat gggcgtgttt ccgctgctgt tcacttttac
     2701 cagccacatc gccgtcacgc tcggcttgtc gctgttcgtg ttcctgcttg tcaccgtagt
     2761 cggactaaag gaacacggat tgcacttctt cagctatttc gtgccgaaag gcattccgat
     2821 tgcgctcttg ccgctgctgg tgatcattga ggtgatttcg tatctgtccc gcatcatctc
     2881 gctgtcggtc cggttattcg ccaacatgat ggccggccac gtgatgctcg aggtgttcgg
     2941 cgcgttcgtg gttatgctcg gcgcggccgg gggaatttat ctggtgccgg cgggcttgtc
     3001 gttcggcgtg aacgtcatcc tgatcggctt cgagctactg gtcgcttcgt tgcaggctta
     3061 tgtgttcgcc atcctgacct gcatctatct gcacgacgcg gtgcatctgc actgattttt
     3121 ccgtaatctc cgaaccacgg ggcccagaag cgcaggctgc ctggacccga atggatgtaa
     3181 cgaaaggaac tgacacatgg atctggcttc cgcgaaagca atcggcgcgg gtatcgcggt
     3241 tatcgcgctg gcgggtgtgg gcgtgggtat cggccacatc ttcgcggcgc tgatctccgg
     3301 cgtggcgcgc aacccggccg cacgtgaccg cgtcttcggt ctcgccattc tcgggtttgc
     3361 gttgaccgaa gcggtcgcgc tttacgccct ggtcatcgcg ttcatcattc tgttcgcagg
     3421 cggctgaacc gttaccgcga gaggacatag catgtcccga cttcgccgga ccgcgcctct
     3481 ggttgcctgg gtgacaggcg ttgcatctgc tgtgccgtgt gcggcgcgcg cggataccct
     3541 gccgcagatg gacttcgcca acgtgctcac gacgtaccag gttctctggg gcgccgtgat
     3601 cttcctgatc ctctacatcc tggcgtcgcg caccgcgttg cccaaggtcg cagcggtatt
     3661 ggaagcacgg gcggaacgga tcgccggcga tctggatgac gccaggatct ccaaggcgcg
     3721 tgccgacgcc ggcatcaagg cagcgtccga tgccacggcg aaggctcggt ccgaagcaca
     3781 ggccgcgatc aacggcgcac tggagacatc gaagcaggcg gccgcctctc aggccgccac
     3841 gctcaatgag cggctggacc agcaattgaa ggaagccgag gggcagatcg ctgccgcccg
     3901 tggcgcagcc ctggcggctc tgcccggagt ggcagcggat accgccattg cattgatcac
     3961 ccggctgacc ggcgccgcac cggacccgat ccggttaagc ggtgcgatcg acgccgcggt
     4021 ggccgcacgc gccgctggcc ggtaagggga aagccgatgc atgaggaacc aggctttttc
     4081 gccgaaccca gaaactgggt cattatcgca ttctttctgt ttttcatcat tttcggcagg
     4141 aagctgtggg gcgcgctggc cggaatgctg gatgcgcgcg ccgcctcggt gcgggcagaa
     4201 atggatgagg ctgccaggct gaaaagcgaa gcccaggcga tgctgaaaga agctgaggcg
     4261 gcgcgagcca aggcgttgac ggacgcgaaa tcactgatcg acggcgctgc ggcggaggcg
     4321 gcgcgggttg ccgaggcggc tcgaacggag gcggaggcat ctgccaaacg ccgtgagcag
     4381 atggcattgg accggattgc tgccgctcag aagcaggcgg tcgacgaggt gcggaccgct
     4441 gcggccgaac tggcgacgat cgccgctcgc caggtgatcg ccgaggggct aagcccggag
     4501 tcgagtgcgg cactgatcga tcaggccatc gcgcaattgc cggccgcact ggcgacccgc
     4561 cgcgcggcgt agcggctgat cgcgtgggtt ggggcgaagg ttcaggcccg cgttgacacg
     4621 ccggcgtgcg tcccccacga atccctgatc atggcgccaa atttcgattt gtccggtcgg
     4681 ttggctttgg tgaccggca
//
LOCUS       DATAVD010001666         3685 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_162357, whole genome shotgun sequence.
ACCESSION   DATAVD010001666 DATAVD010000000
VERSION     DATAVD010001666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3685
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162357"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1805
                     /locus_tag="VHX39_32050"
     CDS             <1..1805
                     /locus_tag="VHX39_32050"
                     /inference="COORDINATES: protein motif:HMM:NF015803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HEX3995825.1"
                     /translation="HRPDISRSARGHDPRPLQVVTRLVIVPAALAACLQIAWAQGLPQ
                     SILTNPVPQGSPIPRILPPTPPGVSPEGIELPPAGPAAPISGPPVRIVAVSVEGTTVY
                     PAAEIQGITQGLTGPAVPFAQIDAVRQQILQRYRSDGYVLSTVSAEYDATSGQLRYRV
                     TEGHIAAVKLDGDIGPAGVQVLRFLTRLTEEPVIDAATLERYLLLAQDVPGVTLHAVL
                     QPSTDQPGALTLVAQVSRQAVSGLVAIDNRASPFTGPIETLAGAALNSVTEYGERTTV
                     SIYHAWPNSQTFGQASVETFIGSSGLKVMIYGGAGETVPTGPLSVINYSGVTQVFGAK
                     ASYPVIRSRQQTLNTWLAFDGIESTIDTNLGTDGAPGVTSYDALRILRAGADYALSDL
                     WAGEDRPAIDGISARVSKGMDILGATTNGQATSAPRLGEQTNLLKFNFQLSRTQTLWY
                     PWQGASLALMGLLTGQWSNSILPPSEQFYLGGAQFTRGYYSGQVAGDKALASTAELQL
                     NTGIDLSHVGLSAEVDSQFYLFYDWGEVWQNQANSLAPRLASAGGGVRIQATRQIEVD
                     FEGVARLNRYPNGMGTGISALNGAAFYWRVLAHF"
     gene            1870..>3685
                     /locus_tag="VHX39_32055"
     CDS             1870..>3685
                     /locus_tag="VHX39_32055"
                     /inference="COORDINATES: protein motif:HMM:NF017658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HEX3995826.1"
                     /translation="MAKARERSQLRLLGMTGRMRSDLLIGTALQTTTFLVLTYPAWAQ
                     PAPNAMPTGGSVVAGRAAITQTTNATTISQSSQRAAINWQSFNVGSQQQVTFAQPSAS
                     AVALNRVTGPDPSQIAGKISANGQVVLVNQAGVTFYKGAQVNAQSLIVSTADVSNANF
                     MAGKLVFDKAGNPNASVVNQGTIAIKRAGLAALVAPRVANSGVINARLGHVVLAGAKT
                     ATLDLYGDGLLSLDVSNQVTKAPVGPGGKTVTALVTNSGTINADGGTVQLTAAAADGV
                     LQTLVQAGGKISANTVGTQTGTVTVAGIGGSVIVTGVLSAAGVAAGTVGGRVAVNATG
                     NVTLASSARINASGSAGGGAVAIGTTLQRAVGGPGTTSAMTAANVTVHKGAIITANAT
                     KTGDGGRVAVLSAGTTTMNGSIAATGGSQSGNGGFVEVSGNSLGLSGSVNVLAPNGLE
                     GTILLDPTNLDIVGGGLTSSSVDGEFSGGTLASGAGDGAPLPSTVLASTLNTLGLSGN
                     VVVQASGFIDVQVPVTVNNGLTMQAGGNLTIETGASIQAGGNIFLQAGTITPGAALQI
                     NASVTSGGNVFVESSGAVTVSGLVTTATGGLASFQANTF"
BASE COUNT          691 a         1111 c         1199 g          684 t
ORIGIN      
        1 gtcatcgacc cgatatctcg cggtcggctc gcggccatga cccgagaccg ctgcaggttg
       61 taaccaggct cgtgatcgtc cccgcggcgc tcgcggcctg cttgcagatc gcatgggcgc
      121 agggcctgcc gcaatcgatc ctgacgaacc cggttccgca aggctccccg atccctcgca
      181 tcctgccgcc aaccccaccc ggagtttcgc cggagggcat cgagctgccg ccagccggtc
      241 cagcggcacc aatatctggg ccgccagtgc gcatcgtcgc tgtctcggtg gagggcacca
      301 cggtctatcc ggcagccgag atacaaggga taacccaggg gttgaccggt ccagcggtgc
      361 cgttcgcgca gatcgatgca gtgcgccagc aaatcctgca gcgctatcgg tccgacggct
      421 atgtgctcag taccgtgtcg gccgagtacg acgccaccag tggtcaatta cggtaccggg
      481 tcacagaggg ccatatcgca gcggttaaac tggacggcga tatcggcccg gccggcgttc
      541 aggtgttacg cttcctgacc cgtttgaccg aggagccggt gatcgacgcc gcgacactgg
      601 agcgctactt gctgctggcc caggatgtgc caggcgtgac gttgcatgcc gtgctgcagc
      661 cttcgaccga ccagccgggc gcactcactt tggtcgccca ggtaagccgc caggcagtgt
      721 ccggactggt ggcgatcgat aatcgcgcct ctccgttcac tgggccgatc gagaccttgg
      781 ctggcgccgc tttgaacagc gtcaccgagt atggcgaaag gaccacggtc tccatttatc
      841 atgcctggcc gaacagtcag acctttggcc aggcctctgt cgagacattc atcggctcct
      901 ccggtctgaa agtgatgatt tatggtggtg cgggtgagac ggtgccgacc ggaccgctgt
      961 ctgtgatcaa ttacagcggt gtcactcagg tgttcggcgc caaggccagc tatccggtga
     1021 tccggtcgcg ccagcagacc ttaaatacct ggttggcgtt cgacggcatt gagtcgacga
     1081 tcgatacaaa tttgggcacc gatggagcgc ccggggtcac cagctatgac gccttgcgaa
     1141 tcctgcgcgc gggtgccgat tatgcgttgt ccgacctgtg ggcgggcgaa gatcggccgg
     1201 caatcgacgg tatctctgca cgggtttcca aaggtatgga tatcctgggc gcaacgacga
     1261 acggccaggc aacctccgca ccacgtcttg gcgagcagac gaatttgtta aaattcaatt
     1321 tccagttaag ccgcacccag acactgtggt atccctggca aggtgccagc ctggcattga
     1381 tggggttgct gacgggacaa tggagcaact cgatcttgcc cccatccgag caattttatc
     1441 tcggcggtgc acaattcacc cgcggctatt attcgggtca ggtggcgggc gacaaggcac
     1501 ttgcttcaac ggcggaactg cagcttaaca ccggaatcga tctgtcgcat gtgggcctgt
     1561 cagcggaggt cgatagccag ttctacctgt tctatgactg gggcgaggtt tggcagaacc
     1621 aggccaacag cctggcgcca cgtctggcct cggccggagg cggggtaagg atccaggcga
     1681 cgcgccagat tgaagtggat ttcgaagggg tggcgcgttt gaaccgctac cccaacggaa
     1741 tgggcacggg catctcggca ctgaatggtg ccgcttttta ctggcgcgtg ctggcgcact
     1801 tttgatccgg cgcccacgcg gaaggcaaat gcactggtcc ggcgttccgg gcgacgggag
     1861 gatgtactga tggcaaaagc gcgcgagcga agccagctgc gactgctcgg aatgaccggc
     1921 cgcatgcgct cggacctcct gattggcact gccttgcaga cgaccacttt ccttgtgctg
     1981 acctatcctg catgggcgca gccggcgccg aacgcgatgc cgaccggcgg ttccgtggtg
     2041 gccggccgtg cggcaattac gcaaaccacc aacgccacga cgatcagcca gtccagtcag
     2101 cgagcggcga tcaactggca aagctttaac gtcggcagtc agcaacaagt cactttcgct
     2161 cagccatccg cgagtgcggt cgcattgaat cgcgtgaccg gaccggaccc gtcacaaatc
     2221 gccggcaaga tcagcgccaa tggccaggtc gtcctggtga accaggcagg agtgacattc
     2281 tacaaaggtg cacaggtcaa tgcgcagagt ttgatcgtca gcacggccga cgtctccaat
     2341 gccaatttca tggccgggaa gctggtgttc gacaaagccg gcaaccccaa tgcgagcgtg
     2401 gtgaaccaag gcaccatcgc gatcaaacga gccggtctgg cggcgctggt agccccgcgc
     2461 gtcgccaatt ccggcgtcat taacgcgcga ttgggtcacg tcgtactggc cggagcgaag
     2521 acagcgaccc tcgatctgta tggtgatgga ttgctgtctc tggatgtcag caatcaggtc
     2581 accaaggctc cggtgggacc cggtggcaaa acggtgacgg cgctggtgac caacagcggc
     2641 acgatcaacg ctgacggggg cacggtgcag ttgactgctg cggcggccga cggcgtgttg
     2701 caaacgctgg tgcaggccgg cggcaagatt tccgccaaca ctgtgggcac gcagaccggc
     2761 accgtgacgg tcgcgggtat tggcggatcg gtgatcgtga ccggcgtgct gagtgccgct
     2821 ggcgtggcgg caggcacggt gggtggtcgg gtggcggtca acgcgaccgg caacgtgacg
     2881 ttggcctcga gtgcgcggat caatgcttct ggctcggccg gcggcggcgc ggtggctatc
     2941 ggcaccactt tgcagcgggc cgttggtggg ccggggacga cctcggcgat gacggcggcg
     3001 aacgtgacgg tgcacaaggg tgccataatc accgccaacg ccaccaaaac cggcgacggc
     3061 gggcgagtcg ccgtgctgtc tgccggcaca acgacgatga acggctcgat tgctgccacg
     3121 ggcggcagcc agtcgggcaa cggtggcttt gtcgaggtgt cgggtaacag tctcggcctg
     3181 tccggcagcg tcaatgtttt ggctccgaat ggtttggagg gcacgattct gctcgatccg
     3241 accaacctgg acatcgttgg gggtggcctg acgtccagca gcgtcgatgg cgagttctcc
     3301 ggaggcacac tggcatctgg agcaggggac ggcgcgccat taccttcgac cgttctggcg
     3361 agcacgctca atacactggg cctgagcggt aacgtcgtcg ttcaggcgtc cggcttcatc
     3421 gacgtgcagg tcccggtcac cgtcaacaac ggcctgacca tgcaggccgg cggcaatctg
     3481 acgatcgaaa ccggagcctc gatccaggcc gggggcaata tctttttgca ggccggcaca
     3541 atcactccag gcgctgcgtt gcagatcaat gccagtgtca cctcgggcgg caacgttttc
     3601 gtggaaagtt ccggcgccgt cactgtgagc ggtctcgtaa cgaccgcaac gggtggcctg
     3661 gcatcattcc aggcaaacac tttta
//
LOCUS       DATAVD010001667         2744 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1088293, whole genome shotgun sequence.
ACCESSION   DATAVD010001667 DATAVD010000000
VERSION     DATAVD010001667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1088293"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..999
                     /locus_tag="VHX39_32060"
     CDS             <1..999
                     /locus_tag="VHX39_32060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995827.1"
                     /translation="LTIQRQLGKDWLISGSYLGNNTIHMWAPLSLDPSVFIPGTCTAG
                     QYGLTTAGPCSSILNTAARRALTLINPTQGAFISGISTLDDGATASYNAMLLSTQHRL
                     ARNFTLAANYTWSHCIADPVTSAIGGSYTDPNDRRLDRGNCGGIDIRHYINISGVMQS
                     PKFSNRIVEGVAGNWQLSPIVGWHSGNAFTVSTGVDNALNNVGGQRPNLTGDPYCATR
                     TANCYLNPAAFLAAPVVPGTFGNLGANSLYGPSYFQVDISLSRRFMVHEQHSLELRAD
                     VFNIENRVNLSTPVSTPLTTSNFGKITGDITATGSGAAGTTTGDPRTMQLSLKYAF"
     gene            complement(1059..1565)
                     /locus_tag="VHX39_32065"
     CDS             complement(1059..1565)
                     /locus_tag="VHX39_32065"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX3995828.1"
                     /translation="MKRFALVGLLAVVAAPFVFGQAVPVTGADDPTALFTDKDPVLNR
                     NKQAAMHIVIDLLEAGHWSEADKWLTERYIQHNPGFSSGRETVMKAFSTRPGGPLPAT
                     LKDAKTKVVAVLAQGDLVCVATVSNRQDPREAGKTYTTTHFDMWRFVDGKADEHWDEG
                     TINPGRGR"
     gene            1742..2014
                     /locus_tag="VHX39_32070"
     CDS             1742..2014
                     /locus_tag="VHX39_32070"
                     /inference="COORDINATES: protein motif:HMM:NF025088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4160 domain-containing protein"
                     /protein_id="HEX3995829.1"
                     /translation="MPTLSIFFGIVIRMYYDDHPPPHFHAVYGDHEAKIGIETLELIE
                     GKLPRRALGLVLDWAELHRQELRDIGSGVRSTTRSPLSHRSSKGMR"
     gene            2018..2278
                     /locus_tag="VHX39_32075"
     CDS             2018..2278
                     /locus_tag="VHX39_32075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2442 domain-containing protein"
                     /protein_id="HEX3995830.1"
                     /translation="MNRIVSASAGQGYTLHVLFDDGKSGKVDLSARLFGPVFEPLRDP
                     LLFAQVRVDEYGAVCWPNGADLAPDALYRTISSYVEPGVLAS"
BASE COUNT          555 a          872 c          765 g          552 t
ORIGIN      
        1 ctcaccatcc agagacaact cggcaaagac tggctgattt cggggagtta cctgggtaac
       61 aacaccattc acatgtgggc tccgctgtcg ctcgatccct ccgttttcat ccccggaacc
      121 tgcacggccg ggcagtatgg gctcacgacc gcaggtccat gctcgtcgat ccttaacacc
      181 gccgcgcggc gcgctttgac cctcatcaat ccgacgcagg gagcattcat cagcggcatt
      241 agcacgctcg acgatggcgc taccgccagc tataacgcga tgctgttgtc aacacaacac
      301 cgcctggcca gaaacttcac cctggccgct aattacacct ggtcgcactg catcgccgac
      361 cctgttacca gcgcaatcgg aggctcctac accgatccga acgatcggcg gctcgaccgc
      421 gggaattgcg ggggcatcga catccggcat tacatcaaca tctcgggcgt catgcagtcg
      481 cccaaattct ccaatcgaat cgtcgaggga gttgccggca actggcagct ctcgccgatc
      541 gtcggctggc actccggcaa cgcgttcact gtgtcgaccg gagtcgataa cgctctcaac
      601 aacgtcggtg gacagcggcc gaacctgaca ggagacccgt actgcgccac acgcaccgca
      661 aattgttatc tcaacccagc cgccttcctg gcggcgcccg tcgtccccgg gacgttcggc
      721 aatctgggcg caaacagcct ctatgggcct tcgtatttcc aggttgatat cagtctgtcg
      781 cgcaggttca tggtgcacga acagcactcg cttgagctcc gcgcggacgt cttcaacatc
      841 gagaaccgcg tgaacctgag caccccggtg tcaacgccgc tcaccaccag caacttcggc
      901 aagatcaccg gcgacatcac cgcaacggga agcggcgccg cagggaccac aaccggcgac
      961 ccgcgcacca tgcagctgtc tttgaagtac gccttctgaa gcattgccaa cgcgcgcggc
     1021 tcggtaaccg tacctcgttt tccgagccgc gcgctgcttt atcttccccg tcccgggtta
     1081 atagtgccct cgtcccaatg ctcgtccgcc ttcccatcca caaaccgcca catatcgaaa
     1141 tgggtagtcg tataggtctt ccccgcctct cgcggatcct gccggttgct gacagtcgcc
     1201 acgcaaacca gatcgccctg cgcgagcacc gcgacaacct tcgtcttcgc gtccttcaac
     1261 gtcgccggaa gcgggccgcc cggccgtgtg ctgaatgctt tcatcaccgt ctcccgtccg
     1321 ctggaaaagc caggattgtg ctgaatatag cgttccgtga gccatttgtc ggcctcactc
     1381 cagtggccgg cttccagcag atcgatgacg atatgcatag cggcctgctt gttccggttc
     1441 agcaccggat ctttatcggt gaacaaagcg gtcgggtcgt cggcgcccgt tacggggacg
     1501 gcctggccga acacaaaagg agcagcaaca actgcgagca agccaacaag ggcaaagcgt
     1561 ttcatgggta ctatagtttg ccaaccaccc ggaccgtgtc aagtagcggg cggaaaccgc
     1621 cgccgtaaac ccggtgccag gtcgtggatc agtttgaaca tctggacggt ttcccggacg
     1681 gccctgcacg cggcctttcc cgctgcggat ctcgtaaagt gggaccaggc cgacgtctct
     1741 catgccaaca ctcagcatct ttttcggaat cgtcatccga atgtattatg acgatcatcc
     1801 gcccccgcac ttccacgccg tatacggcga tcatgaagcg aaaatcggga tcgagacgct
     1861 ggaactcatc gagggaaaac tgccgcgccg ggccctcggg ctggttctcg actgggccga
     1921 gcttcatcgg caggagttgc gcgatattgg gtcaggggtc aggagcacga cccgctctcc
     1981 cctatcgcac cgctcgagta aaggaatgcg ttgagaaatg aatagaattg tgagcgcaag
     2041 cgccggtcag ggatacaccc ttcacgtgct gtttgacgat ggcaagagcg gaaaagttga
     2101 tctctccgcg agactcttcg ggccggtctt cgaacccctt cgcgatccgc ttctgttcgc
     2161 ccaggttcgg gtagacgagt atggcgcggt gtgctggccc aatggagcgg atctcgctcc
     2221 tgacgcgctc tatcggacaa tttcttcgta cgtcgagcca ggcgtactcg cgtcgtagtc
     2281 cgccgggttg ccttcgccgc agcggaagtc cgatttgagt aagtcggtag gcagcggacc
     2341 gcgcgggatc ggtttctcaa cagtcgcgga acgcgcgttt cccggccggg tgatgtcctt
     2401 tcgcaatcaa ttgaaatccc aggagttcca gaacaccaaa attctgggcc aaataagccg
     2461 ttttgagctt gtcatggcaa gatggtgaga atgccgatta tcgtttcgcc gactcagttt
     2521 acgtcgtgga tcgagcttca aaaaaaactg gcgacatata accttcagtg ggccttccga
     2581 ggaatgggga gcgcacaatg gccactgcag acttccttgg agcgtctgct ggtttcgcgc
     2641 gtggtcgagg cggaacggta cttgcggacc gtgttccagc gccgggcaca ccaccatgtc
     2701 cgggatcgcc ccgccccaga tgactatctg gaatggctgg cgct
//
LOCUS       DATAVD010001668         1538 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1647596, whole genome shotgun sequence.
ACCESSION   DATAVD010001668 DATAVD010000000
VERSION     DATAVD010001668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1647596"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..872)
                     /locus_tag="VHX39_32080"
     CDS             complement(<1..872)
                     /locus_tag="VHX39_32080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3995831.1"
                     /translation="MNFTRRTVTLGGLATVAAAAVPLRASRAQTEPTIKIGVLTDMSG
                     PYRDLAGPGAEVAARQAVQEFAAKGFKVDVVIADHLNKPDVGTTIARQWFDRDGVDVI
                     VEVANSGVSLAVSAVAKEKNKIFLGSGAATSDLTGKLCNANTVHWVYDTYMLAKSTGG
                     AMVKAGGDSWYFITADYAFGHALQRDTSDFITGAGGKVLGSIAYPFPGTSDFSSYLIQ
                     AQASGAKVLGIANAGADTINTIKQAKEFGIKMRLAGLLLFISDVHSLGLETAQGIALT
                     DAFYWDMNKGTRIFS"
     gene            complement(1026..>1538)
                     /locus_tag="VHX39_32085"
     CDS             complement(1026..>1538)
                     /locus_tag="VHX39_32085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3995832.1"
                     /translation="NAETIRLMSNQIAHAGIAICPEERGIFGTLSVTENLKLPPVVAP
                     GGLSVDEIYTLFPNLKERAKTAHGTKLSGGEQQMLAIGRILRTGAKMLLLDEPTEGLA
                     PVIVQQIGRTIREIKNRGFTVLLVEQNFRFAATVADRHYVMEHGKIVDMIPNQLLESS
                     MDKLHEYLGV"
BASE COUNT          268 a          498 c          474 g          298 t
ORIGIN      
        1 gagaaaatcc gcgtcccctt gttcatgtcc cagtagaacg catcggtcag cgcgatgccc
       61 tgcgccgtct ccaggccaag cgaatggaca tcgctgatga acagcagcag cccggccagc
      121 cgcatcttga tgccgaattc cttcgcctgc ttgatcgtgt tgatggtgtc ggcgccggca
      181 ttggcgatgc ccagcacttt cgcgccgctg gcctgcgcct ggatcagata ggacgaaaaa
      241 tcactggttc ccgggaacgg ataggcgatg ctgcccagca ccttgccgcc ggcgccggtg
      301 atgaaatcgc tggtatcgcg ctgcagtgcg tgaccgaagg cgtagtcagc ggtgataaaa
      361 taccaggaat cgccgccggc cttcaccatc gccccgccgg tggacttcgc cagcatgtag
      421 gtgtcgtaca cccagtggac ggtgttggcg ttgcacaact tcccggtcag gtcggacgtc
      481 gccgcgccag agcccaggaa gatcttgttc ttttccttgg ccaccgcgga caccgccagc
      541 gaaacgccgg agttggcgac ctcgacgatc acatccacgc cgtcccggtc gaaccactgg
      601 cgcgcgatcg tggtgccgac atcaggcttg ttcaggtgat cggcgatcac cacgtcgacc
      661 ttgaagccct tggcggcgaa ctcctgcacg gcctgacgcg cggcgacctc cgcgcccggg
      721 ccagcaagat cccggtaggg gcccgacata tcggtcagga caccgatctt gatcgtcggt
      781 tccgtctgtg cccggcttgc acgcagcggc acggccgccg cggcgaccgt tgcaagcccg
      841 cccaacgtaa cggttctacg tgtgaagttc atcacgccag ctcccttcgg ggcctgttac
      901 agggcgcccc ggtctccctt tgccggacag gttggtgggc gggccggcgc cgccgtgcag
      961 tccgattgcc gccatgcacg tgcgcccgac cgcggcacca ggtcaggcaa aacactttcc
     1021 tgttctcaga cccccagata ttcgtgcagc ttgtccatgc tggactcgag tagctggttc
     1081 gggatcatat cgacgatctt gccgtgttcc atgacgtaat gacggtccgc gacggtcgcg
     1141 gcgaaacgga aattctgttc caccagcagt acggtgaagc cgcggttctt gatttcccgg
     1201 atggtgcggc cgatctgctg cacgatcacg ggggcgaggc cctcggtcgg ctcgtccagc
     1261 agcagcatct tcgcaccagt gcgcaggatg cggccgatcg ccagcatttg ctgctcgccg
     1321 cccgacagtt tggtgccatg ggcggtcttg gcgcgttcct tcaggttggg aaacaaagtg
     1381 tagatctcat ccaccgacag gcccccgggg gcgacaaccg gcggcagttt caagttttcg
     1441 gtaaccgaca gcgtaccgaa gatgccgcgt tcctccgggc agatggcaat gccggcatgg
     1501 gcgatctggt ttgacatcag ccggatcgtc tcggcatt
//
LOCUS       DATAVD010001669         3173 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_162487, whole genome shotgun sequence.
ACCESSION   DATAVD010001669 DATAVD010000000
VERSION     DATAVD010001669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3173
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162487"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            70..1023
                     /locus_tag="VHX39_32090"
     CDS             70..1023
                     /locus_tag="VHX39_32090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010515675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3995833.1"
                     /translation="MGWFADATQNPVAVAVLIPCFNEQTAIAKVIADFRAALPVATIY
                     VYDNNSTDDTAIVARAAGAVVRTESLQGKGHVVRRMFADIEADVYVLVDGDDTYDARA
                     APIMMKLLLERRLDMVNAARDTPAPAAYRLGHKLGNAILSGMVRHVFGRGINDMLSGY
                     RVFNRRFVKSFPALASGFETETEFTVHALALHMPVAEVYAPYRSRPAGSHSKLNTITD
                     GFRILREIVTLIERERPLSCAAAITAVLLALALALGLPVVIAFLHTGIVDRLPSAVLS
                     ASIVLLASLTLGCGLILDAVAHGRKELKRLSYLAIPFPPGH"
     gene            1025..2152
                     /locus_tag="VHX39_32095"
     CDS             1025..2152
                     /locus_tag="VHX39_32095"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3995834.1"
                     /translation="MELTDSRALAAPPISVRHVAGAERPPWAAYDVDVVILALDRAEA
                     TVAAIRSALNQIGVSRYVIVVDQGSRPDALTCLALAVQGRDDATLVVLDRNYGVPGGR
                     NIGSGLGSGRHIVGLDNDAEFAAPDTLARLTAGLDADPELAAIGCRIVADATGEDDLS
                     SWGYPPALLPRSQETFDTATFVGAGHAIRRAAWKDVGGYDARLFFCWEEYDFCLRAIA
                     RYWRVRYRGDIVVRHKVSPERRVAWSGDRWFHFVRNRIYIGRKSGESWLALAPRIAGY
                     CLKAAYNGCLHETPGALWAAFRMARGVRPVPLHRSARHYLQRTDTAWRGSWFARLRRD
                     VLAALPGTSRRSAQATDASIRAIRSADSGPASAAATHSASS"
     gene            complement(2065..3027)
                     /locus_tag="VHX39_32100"
     CDS             complement(2065..3027)
                     /locus_tag="VHX39_32100"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3995835.1"
                     /translation="MDTHSFGRLAPVSVLTLGGGGLGQLWGPTTREECVATVRAAVDA
                     GITLVDLAPRYGDGKAEQVVGEAFGGRLPSGVRVTSKCNLGNPPPERIERILRQSIEA
                     SLRLTQLDRLDVFFLHSNIVPRGNAMWRRVDTSRFVPLEVFQDTIRPLFEKFVTEGLI
                     GAWGVTGIGHPEAILTVLGEDPKPAVVQVIANLLDSPGGLKFFDGPARPREIMATAHA
                     NGVAVMGIRAVQAGALTAAIDRPLPADHPELWDYARAAGFRALCAELGENPAVLAHRY
                     ALSLPIDTMVLGVKNRQELAECVAAADAGPLSADLIARIDASVA"
BASE COUNT          549 a         1047 c          985 g          592 t
ORIGIN      
        1 atcatcgacc atctgtctcc cggaaccaag gcgctgctgt cgagcgctgc acgccagccc
       61 agagagacca tgggatggtt cgctgacgca acgcaaaatc cggtcgctgt ggccgttttg
      121 atcccgtgct tcaacgaaca aactgccatt gccaaggtta tcgcagattt tcgtgcggcc
      181 ctgccggttg cgacgatcta tgtttatgac aacaactcga ccgacgatac cgcgatcgtt
      241 gcgcgagcgg caggcgccgt ggtgcgcaca gagtcgctgc aaggcaaagg ccacgtggtg
      301 cggcggatgt tcgccgatat cgaagccgac gtttacgtgc tggtcgacgg cgacgacacg
      361 tatgacgcca gggctgcgcc catcatgatg aaattgctgc tggaacgcag gctcgatatg
      421 gtgaatgccg cgcgcgacac accggcacct gctgcctacc ggctcggtca caagttgggc
      481 aacgcgattc tcagcggcat ggtccgtcac gtattcgggc gcgggatcaa cgacatgctg
      541 tcgggttacc gcgtgttcaa ccgccgtttc gtcaagtcgt ttcccgctct ggccagcggt
      601 ttcgagaccg agaccgaatt caccgtccat gcgttggcgt tgcatatgcc ggtggcggaa
      661 gtttacgcgc cctatcgcag ccggcctgcc ggatcgcatt ccaagctcaa tactatcacc
      721 gatgggtttc gcatcctgcg tgagatcgtg acgctgatag aacgggaacg gccgttgtcc
      781 tgtgctgcag cgatcaccgc agtattgctg gccttagccc tcgctttagg gctgcccgtg
      841 gtcatcgcat ttctccacac cggaattgtc gaccggctgc ctagcgcagt actgtcggcg
      901 agtatcgtgc tgctggcgtc gctcaccttg ggatgtgggc tgatattgga tgccgtcgcg
      961 catgggcgga aggagctgaa acggctctcc tacctggcga tcccattccc gccaggccat
     1021 tgacatggaa ctcaccgaca gtcgcgcgtt ggcagcgcca ccgatctcag tgcgccacgt
     1081 cgcaggcgcg gaacggcctc catgggccgc ttacgacgtc gacgttgtta ttctggcgct
     1141 ggatcgtgcc gaggcaacgg tggcagcgat ccgctcggcg ctgaaccaga tcggcgtgtc
     1201 gcgctatgtc atcgttgtag accagggctc acggccggat gcactgacgt gcctggcctt
     1261 ggccgtgcaa ggccgcgacg atgcgacatt ggttgtactg gatcgcaatt acggcgtgcc
     1321 gggcgggcgc aacatcggtt ccgggctggg aagcgggcga cacatcgttg gtctggacaa
     1381 tgacgcagaa ttcgctgctc cggacaccct ggcacggctc acagccgggt tggacgccga
     1441 cccggagctt gccgcgatcg gctgccggat cgtggccgac gcgacgggcg aagacgacct
     1501 ctcatcgtgg ggttatccgc cggcgttact gcctcgcagc caggagacct tcgataccgc
     1561 aacgttcgtc ggcgccggtc atgccataag gcgcgccgcg tggaaggacg ttggcggtta
     1621 cgacgcacgc ctgttcttct gctgggagga atacgatttc tgcctgcgtg cgatcgctcg
     1681 ctactggcgg gttcgttatc gcggcgacat cgtggtacgg cacaaagtga gccccgagcg
     1741 ccgcgtcgcc tggtccggcg accgctggtt tcatttcgtt cgcaatcgca tctatatcgg
     1801 tcggaaaagc ggcgagtcgt ggctggcact cgcgccgcgg attgccggat attgtctcaa
     1861 ggccgcgtat aacggctgcc tgcatgaaac gccaggcgca ctttgggcgg cattccgcat
     1921 ggcacgaggc gtgcgaccgg tccctctcca tcggtccgcg cggcactacc tgcaacggac
     1981 cgataccgca tggcggggca gctggtttgc ccgtctgcgg cgcgacgtcc tggcagcact
     2041 acccggaacg tccaggcgat cggctcaggc cacggacgca tcaatccgtg cgatcagatc
     2101 cgccgacagc ggaccggcat cggcagccgc aacgcactcg gccagttcct gacggttctt
     2161 cacgccaagc accattgtgt cgatcggtaa ggacagcgcg taacgatgcg ccaacacggc
     2221 cgggttctcg ccgagttcgg cgcacagggc gcggaagccg gcggcccgcg cataatccca
     2281 cagttccggg tgatccgccg gcaacggccg atcaatcgcg gcggtcagcg ctccggcttg
     2341 caccgcgcga atgcccatca ccgcgacgcc gttggcgtgc gccgttgcca tgatctcacg
     2401 cgggcgggcc ggcccgtcga agaatttcag cccccccggc gagtcgagca aattggcgat
     2461 tacctgaacc accgccggtt tcgggtcctc gcccagtacc gtcaggatcg cctcaggatg
     2521 gccgatgccg gtgacgcccc aggcaccgat caggccctcg gtcacgaact tttcaaacag
     2581 cggccggatc gtgtcctgga acacctccag cggcacgaac cggctggtgt ccacgcgccg
     2641 ccacatcgcg ttgccgcgcg gcacgatgtt ggagtgcagg aaaaacacgt ccagccggtc
     2701 caactgcgtc agccgcaggc tggcctcgat cgattgccgc aggatgcgtt caatccgctc
     2761 cggcggcgga ttgcccagat tgcacttgct ggtcacccgg acacctgacg gcagccgccc
     2821 gccgaacgct tctcccacga cctgctccgc cttgccgtcg ccgtaacggg gcgccagatc
     2881 gaccagcgta atgccggcat ccaccgcagc gcgaacggtt gccacgcatt cctcccgcgt
     2941 ggtgggtccc cagagttgac ccaaaccgcc gccaccaagg gtcagcacgg aaaccggcgc
     3001 caaacgtcca aacgagtgcg tgtccatcct cgagatcctc ccgctttcgc cgcatcatcg
     3061 acgatgccac cctgtcgggc caacccccgg gatatccgca tgcttgtcac tttggttgcc
     3121 ttgctcgccg ccgccacgat cgccgttccg ctgacccgcc gttccgggtt ggg
//
LOCUS       DATAVD010001670         5010 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_718092, whole genome shotgun sequence.
ACCESSION   DATAVD010001670 DATAVD010000000
VERSION     DATAVD010001670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5010
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_718092"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            95..526
                     /locus_tag="VHX39_32105"
     CDS             95..526
                     /locus_tag="VHX39_32105"
                     /inference="COORDINATES: protein motif:HMM:NF013853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF29 domain-containing protein"
                     /protein_id="HEX3995836.1"
                     /translation="MSDLYDDDIVLWSERQAELLRRHVAGDRANDAIPDWTNIIEEIE
                     SVGREQLHAVESLLLMALIHRLKAEAWPDSRDVPHWRAEERTFRNQARRRFAPSMRQR
                     LDLADIYADALRGLPETNNGVPPLPVPETCPATLDELLAPV"
     gene            635..1747
                     /locus_tag="VHX39_32110"
     CDS             635..1747
                     /locus_tag="VHX39_32110"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEX3995837.1"
                     /translation="MPGTYPLPTGDLKSLGFASKPLDHLDALIRSHIDQGRYPGAQIA
                     LARHGKLALFRTYGDAKTEGGKLPATNETLFLLFSQTKVLTSSALWTLVEEGKLSFMD
                     KVTEFLPEFAAHGKADITLEQVMSHRGGFPSGDVTKATWADHKKMRAEVCDFSLDWTP
                     GTRLQYHARAAHLTQAMVIEAVTGQDYRNVIRTRVLEPLGLANDIFVGVPEEQQSRCA
                     DTYAKEPRDNSADFKAAGMPSGGGYATARGMAAFYQMLGHGGRLNDVRQFSPRLVSYV
                     SRNHTGEMGDYQMDGIPMHRGLGPHVRGDSERIRGLGTIGAPVTFGHGGAGTSYSWTD
                     PTSGVSFTYLTNYMQDDPWHSSRLDRVSNLVHAAID"
     gene            complement(1729..2502)
                     /locus_tag="VHX39_32115"
     CDS             complement(1729..2502)
                     /locus_tag="VHX39_32115"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX3995838.1"
                     /translation="MTIVFIGDIHQHWHYIDAGLAAQLTLPKAAVLLGDIQCERPLDE
                     LAAPLLRRGIAVHWIHGNHDNDGGPDMWANLAAPERNPLTASGGLHRRVVSIDGVRIA
                     GLGGTFRPPVWSPPSQPRLRHRHQLADHLAGHGPVYGPQQRAALAHSLSTAAIWPEDI
                     DALASQKADVLVTHEAPSSHPAGSAVLDELARRMGARMIVHGHHHVVSHARAQDGLTV
                     LGVASAWGTALDGTVLWEGEKPRPLPVAGAGWMVQSIAA"
     gene            2542..3138
                     /gene="rsmG"
                     /locus_tag="VHX39_32120"
     CDS             2542..3138
                     /gene="rsmG"
                     /locus_tag="VHX39_32120"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007282975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEX3995839.1"
                     /translation="METFRQLLSPEAAASLDAYEDLLRKWNATVNLISAADLPQLWPR
                     HIEDSLQLGTVAGALPSRAIDLGSGAGFPGLILSIAFRIEVDLVEQDQRKAAFLREAI
                     FVTGAPAHVHATKIERAKLSPAPLVTSRALAPLPVLLRLAKPLLTDDGFCLFPKTRSA
                     ESEITEAERHWSMQLERFPSRTDANGMILRISELRPVG"
     gene            3196..4071
                     /locus_tag="VHX39_32125"
     CDS             3196..4071
                     /locus_tag="VHX39_32125"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3995840.1"
                     /translation="MNDNVTPDPEALLAGLQRQATRHETPCGDGRMVWHLWDKSGGHA
                     PVVVLFHGGAGSWRHWVRNIPVLVETYRVLAPDLPGLGESDFPPDGDSADPVARIVAD
                     GIDQIIGADTGFDVVGFSFGGTMAACVGVLRGKRVRSVTIIGSSGVGALGSAVRLEKV
                     RHLEGQERRDTHRINLGRLMIADPAKIDDLAIAIQDWNTVRSRLKTPAISRSGVILTA
                     IDKLQSPLNGMWGELDAPANPKGPERVATLKARKPDADIRLIPATGHWAAYESPEIVN
                     KTLLEMLARTRPAGV"
     gene            4076..>5010
                     /locus_tag="VHX39_32130"
     CDS             4076..>5010
                     /locus_tag="VHX39_32130"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3995841.1"
                     /translation="MSDASEIATGPGETMGNAGPGMLEGVRVIEIADERAEYTGLLMS
                     GLGAEVIKIEPPEGNATRRIGPYLDDQPGPDRSLFFWHYNRNKKSVVLDLRETPAQER
                     LLRLLEGADVLLDSSCGALNAALGLDRAALEKRFPKLVIARMTPFGDDGPWKDFHGSD
                     LIHLALGGITMNCGYDPDPNLEYDTPPIAPQVWHAYHIAGEQLATGIIAALINRHRTG
                     LGQDVSVAIHEAVSKNPELDIMHWVMRRVPLWRLTARHALETPNASPSIVHTKDGRWF
                     ISHGMGARDLKNLVPLLSKYGMEADLQPPGPDVDL"
BASE COUNT          953 a         1514 c         1576 g          967 t
ORIGIN      
        1 catgtcatgg acgataacca attgaatttg ttcggatatt gaccggacag tagtgatata
       61 ttatcaaact gaagatgccg gctgggagtg accaatgagc gacctttatg acgacgacat
      121 cgttctatgg tccgagcggc aggctgagct gcttcggcgc catgtcgccg gcgatcgagc
      181 caacgacgcg attcctgatt ggaccaacat cattgaggaa attgagagcg tgggacgcga
      241 gcaactgcac gccgtcgaat ccctgttact catggcgctg atccaccggc tcaaggcaga
      301 ggcgtggccg gactcacgcg atgtcccgca ttggcgcgcg gaagagcgca cgttccgcaa
      361 ccaggcaagg cgccgtttcg caccgtccat gcgtcaacgc ctggaccttg cggatattta
      421 tgctgacgcg ctgcgtggct tgccggagac caacaacggc gtaccgccgc tgccagtgcc
      481 ggaaacctgt ccggcgacgc tggacgagtt gcttgctccg gtttgaccgc tgccgtgttc
      541 gtagaaagac tcaggtaaac gcctctcacc ggttggcggc acccagagcc cagagtagca
      601 tccccaccag acgcaacctg agggacacgc agccatgcca ggaacctatc cgctacccac
      661 cggcgatttg aagagccttg gcttcgccag caagccactg gatcatctgg atgcgctgat
      721 ccgctcgcac atcgaccagg gtcgctaccc cggcgcccag atcgcgctgg cccggcatgg
      781 caagctggca ctgttccgca cctatggcga cgccaaaacc gagggcggca agctgcccgc
      841 aaccaacgag acgctgttcc tgctgttcag tcagaccaaa gtgctgacct catccgcgct
      901 gtggaccttg gtcgaagagg gcaagctgtc cttcatggac aaagtcaccg aatttctgcc
      961 ggagttcgcc gcccatggca aagccgacat cacgctggaa caggtgatgt cccaccgcgg
     1021 cggcttcccc agcggcgacg tgaccaaggc cacctgggcc gaccacaaga aaatgcgagc
     1081 cgaggtctgc gacttctcgc tcgactggac gccggggacg cggctgcaat accacgcccg
     1141 cgccgcgcac ctgacccagg cgatggtgat cgaggcagtg accggtcagg attatcgaaa
     1201 tgtgatccgc acccgtgtgc tggagccgtt gggccttgcc aacgatatat ttgttggcgt
     1261 gccggaggag caacaatctc gttgcgccga cacctatgcc aaagaaccac gcgataattc
     1321 agcggatttc aaggcggcgg gaatgcccag tggaggcggt tatgcaacgg cgaggggcat
     1381 ggcggcattt tatcagatgc tcggccatgg cgggcggttg aacgacgtgc ggcagttctc
     1441 gccgcggttg gtgtcttatg tgtcgcgcaa ccacaccggc gaaatgggcg actatcagat
     1501 ggatggtatc ccaatgcatc gcggcctcgg ccctcacgtc cgcggcgaca gcgaacgcat
     1561 ccgcggatta ggcaccatcg gcgctccggt caccttcggt catggcggag ccggaacgtc
     1621 atactcgtgg accgatccga ccagcggtgt gtcgttcaca tatctgacga attacatgca
     1681 ggacgatccg tggcactcgt cacgactgga tcgcgtgtca aacctggttc acgccgcgat
     1741 cgactgaacc atccagcctg cgcctgccac ggggaggggg cgcggctttt ccccctccca
     1801 cagcaccgtg ccatcaagcg ccgtgcccca ggccgaggcg accccaagta cggtcaatcc
     1861 atcctgcgcc cgcgcatgcg atacgacgtg atgatgtccg tgcacgatca tccgcgcgcc
     1921 catccgccgg gccagttcat cgagcaccgc gctgcccgcg gggtggctgc ttggcgcttc
     1981 atgggtgacc agaacgtcag ccttttgtga cgcgagcgcg tcgatgtcct ctggccagat
     2041 ggctgcggtg ctcagcgaat gtgcgagcgc tgcccgctgc tgcggaccgt agaccgggcc
     2101 gtggccagcc aggtggtcgg cgagttggtg acgatgccga aggcggggtt gcgatggagg
     2161 tgaccacacg ggtggccgga acgttccgcc caggcctgca atgcggacgc catcgatcga
     2221 caccacccgg cggtgcaacc cgcccgacgc cgtcaacgga ttgcgttccg gggcggcgag
     2281 attggcccac atgtcagggc cgccatcgtt gtcgtgattg ccgtggatcc agtgcacggc
     2341 gatgccccga cgaagcagcg gcgcggccag ttcgtcgagc ggccgttcgc actgaatgtc
     2401 gcccagaagc actgcggctt tcggcaaagt gagctgagcg gcgaggccgg cgtcaatgta
     2461 atgccagtgc tggtgaatgt cgccgatgaa aacgatggtc atgcggttcc gggatcgcag
     2521 tttcacctct atcatggcgg gatggagacg tttcgccaac tgctttcccc cgaagctgcc
     2581 gcttcgttgg acgcgtacga ggatctgctg cgcaaatgga acgccacggt caatctgatc
     2641 agcgcggccg atctgccgca actctggcca cgccatatcg aggatagtct gcagcttgga
     2701 accgtcgccg gcgcgttacc gtctcgtgcg atcgatctgg gttcgggtgc cggattcccc
     2761 ggcctgatcc tttcgattgc attccgcatc gaagtcgatc ttgttgaaca ggaccaacgc
     2821 aaagccgcat tcctacgcga ggctattttc gtcacgggcg cgcccgccca cgtccacgcc
     2881 accaaaatag aacgcgcgaa gctgtctccc gctccattgg tgaccagtcg cgctctggcg
     2941 ccgctgccgg tcctgttgcg tctggcaaaa ccgttgctga ccgacgacgg gttctgtctg
     3001 ttcccgaaga cccgttctgc ggagtcggaa atcactgaag cggaacggca ttggtcgatg
     3061 cagcttgagc gttttccgag ccggaccgat gcaaacggca tgattctacg gatcagcgag
     3121 ctccggccgg ttggctgatt tggtaatggt gccgggtgtt tgtagactgg cgcacccgtg
     3181 acggacgagg atccgatgaa cgacaacgtg acgcccgacc ccgaggcact actggccgga
     3241 ttgcagcgcc aggccacgcg ccacgaaacg ccgtgtggcg acggccgtat ggtttggcac
     3301 ctgtgggata agtccggtgg ccatgcgccg gtcgtggtgc tgttccatgg cggagccggt
     3361 tcgtggcgcc actgggtgcg taacattccc gtgttggtcg agacctaccg cgttttggcc
     3421 ccggatttgc ctggcctcgg cgaatctgac tttccgcccg atggtgacag tgccgatccg
     3481 gttgcgcgca tcgttgcgga cggcatcgac cagatcattg gcgccgatac cggctttgac
     3541 gttgttggat tttcctttgg tggtaccatg gcggcctgcg tcggtgtgtt acgcggcaag
     3601 cgggttcgtt ccgtgacgat cattggctcg tccggggtag gtgcgctcgg ctccgcggtc
     3661 agactggaga aagtgcggca tcttgagggg caggagcgtc gtgacacaca tcgcatcaac
     3721 ctcggccggt tgatgattgc cgatccggcg aaaatcgatg atctggccat cgccattcag
     3781 gattggaaca cagtgcggtc gcggctgaaa acgccggcaa tttcgcgcag cggcgtgatt
     3841 cttacggcaa tcgacaaatt gcagtcgccg ctgaacggta tgtggggcga gctggatgca
     3901 cccgccaacc caaagggccc ggaacgtgtc gctacgctga aagcccgcaa acccgacgcc
     3961 gacattcgac tcatcccggc caccggtcac tgggctgcct acgaatcgcc agaaatcgtc
     4021 aacaagacgc tgttggaaat gctggctcgc acgcggcccg ctggagttta aatttatgtc
     4081 tgacgcaagc gagatcgcaa caggcccagg agagacgatg ggcaatgccg ggccgggcat
     4141 gcttgagggc gtgcgggtca tcgagatcgc ggatgaacgc gcggaatata ccggcctgtt
     4201 gatgtccggt ctcggcgcgg aagtcatcaa aattgaaccg cccgaaggta atgcgacgcg
     4261 gcggatcgga ccgtatctgg acgatcagcc aggtcccgac cgttcgttgt tcttctggca
     4321 ctacaatcgc aacaagaagt ccgttgtgct cgacttgcgg gaaactcctg ctcaggaacg
     4381 tctgttgcgc ctgttggagg gggccgacgt tctgctcgac tccagctgtg gtgcgttgaa
     4441 tgcggcactt ggcctggatc gtgccgcgct tgagaaacga tttccgaagt tggtgatcgc
     4501 gcggatgaca ccgttcggcg atgacgggcc gtggaaggat tttcacgggt ccgatctgat
     4561 ccatctcgcc ttaggcggga tcacgatgaa ttgcggttac gatcccgatc cgaacctgga
     4621 atacgatacc cctccgatcg cgccccaggt ttggcacgcc tatcatatcg cgggtgaaca
     4681 gctcgccacc ggcatcattg cggcgctgat caatcggcat cgcaccggcc ttggccagga
     4741 cgtttctgta gcgatccacg aggcggtctc gaagaatccc gagctggaca tcatgcactg
     4801 ggtgatgcgg cgcgtgccgc tgtggcggtt gaccgcccgg cacgcgctgg agacgccgaa
     4861 cgcatctccg agtattgtgc acaccaagga cggccgttgg ttcatttcgc atggtatggg
     4921 tgcgcgggac ctgaagaatc ttgtgccctt gctcagcaaa tacggcatgg aggcggattt
     4981 gcagccgccc ggtccggatg tcgatctgaa
//
LOCUS       DATAVD010001671         3618 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_905687, whole genome shotgun sequence.
ACCESSION   DATAVD010001671 DATAVD010000000
VERSION     DATAVD010001671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3618
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_905687"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..263
                     /gene="minE"
                     /locus_tag="VHX39_32135"
     CDS             <1..263
                     /gene="minE"
                     /locus_tag="VHX39_32135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010507107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0032955 - regulation of division septum
                     assembly [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HEX3995842.1"
                     /translation="PRTAPVARERLQVLLAHERMAAGNSELLNVLREEILAVIAKHIT
                     VDRDKVNVKFDRSASSSTLEIDVEMPPILPVGRAQTAGAAAA"
     gene            364..1857
                     /locus_tag="VHX39_32140"
     CDS             364..1857
                     /locus_tag="VHX39_32140"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF004816.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX3995843.1"
                     /translation="MDPTFLPAGKLAEMTRRREIGCLELLDHYIARVARLDGPINAVV
                     VTDFDRARERARMLDQAGERSAPLFGVPMTVKESFDVAGLPSTLGHPERRNHRVQISS
                     IAVRRLEAAGVIIFGKTNVPVDLADWQSYNPLYGTTCNPWNRDHTPGGSSGGSAAALA
                     AGLTGLELGSDIGGSIRVPAHFCGVFGHKPTWTLCSGYGDPATSPAAPTDIASLGPMA
                     RSADDLAIALNVLAGPDPDETGLKYALPPPRAAGLKALRVAVWSQEPGQETDTEIVGA
                     IEALATELERFGCTVGRSARPAFDATEAFHIFLQALDAGWSARATEEILQAKRQRLAT
                     LDPHDMSADAVMARATDMSHREWLMLNERRMKFRRLWSAFFREWDIVLTPVINTVALP
                     HMQEDRSIVQGRLQGVPRHIQTGPVWERQVAVNERTIAYNDMCFWPGLVGGFHLPVTV
                     VPIGFTKSGLPIGMQISGPIYGDRTTLMAASLFEQAGFTFRPPTLEA"
     gene            1931..3151
                     /locus_tag="VHX39_32145"
     CDS             1931..3151
                     /locus_tag="VHX39_32145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3995844.1"
                     /translation="MRLTRRAALSAATAFAALPPLRARAQTRPVIKIGVINDQSGPYK
                     DLNGPTSVICTRQAVLEFNAAGFDVEVLSADNQNKPDVAVAIGRQWIDTDGVDLIMDC
                     AASSAALALASLCREKNKICIPTSTATSDLTGKACSPNTIHWVFDTYMEAKSTGGAMV
                     TAGGDTWYMLFPNYAFGEALQRDASRFVLAAGGKVLGAETYPFPETTDFSAQLVKARS
                     SGAKVLGFCGAGADLVNVVKQAAEFGLNKTMSVAAMVAYTQDVRSIGLEGAQGMKLSE
                     SYYWDLNDRTRSFQSRIQPKVKLWPSMAQAGNYSATLHYLKIVTAMGAAAAKADGAAT
                     VAQMKKMPTDDDCFGIGRIREDGRKIHPVYLFEVKKPSESKQEWDVYKLLATTPAEEA
                     FRPLAEDGCPMIKA"
     gene            complement(3170..>3618)
                     /locus_tag="VHX39_32150"
     CDS             complement(3170..>3618)
                     /locus_tag="VHX39_32150"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3995845.1"
                     /translation="HDDIAGWKKLLDVNATGVFLGTKLAAAAMMTAGRGSIVNISSIM
                     GFVGSADGHPGYSASKGAVRLYSKAAACRYGPHGVRVNSVHPGYLPPMLNATNQAMRA
                     SKIEATPLRRLGEPIDVANGVLFLASDEASFITGTELVIDGGFLAQ"
BASE COUNT          732 a         1082 c         1110 g          694 t
ORIGIN      
        1 ggccacggac agctcccgtg gcgcgcgaac ggttgcaggt gctgttggca catgaacgga
       61 tggcggcggg taattccgaa ttgctgaatg ttctgcgcga ggaaattctc gcagtgatcg
      121 cgaagcacat cacggtcgat cgcgacaaag taaacgtcaa gttcgaccgc agcgccagtt
      181 cgtcaacgtt ggagatcgat gtggaaatgc ccccgatcct accggtgggg cgagcgcaga
      241 ctgctggcgc ggctgcagcc tgatcggggc catgtaaaca gcccacacaa cgtgccggct
      301 gcagtgtgtt ctaccgacct cgcccgctat gctccacctc aaaccgggct gaggagagcg
      361 cgcatggatc caacgttcct gcctgcgggg aagctggcgg agatgacccg gcgccgtgaa
      421 atcggctgtc tggaattgct tgatcactat atcgcccggg tcgcgcggct ggatggacca
      481 atcaacgccg ttgtcgtgac agacttcgac cgtgcgcgcg aacgagccag gatgttggat
      541 caggcaggcg aacgttccgc gccactgttc ggcgtgccga tgacggtcaa ggagagcttc
      601 gatgtcgcag gactgccatc gaccctcggg catccagaac gccgcaatca tcgcgtccag
      661 atttcatcta ttgcggtgcg ccggctggag gcagccgggg tcataatatt cggcaagacc
      721 aacgtgcccg tcgatctggc ggactggcag agctacaacc cgttgtacgg gacaacgtgc
      781 aatccgtgga accgggatca tacgccgggc ggatcctcag gcggttccgc ggcggccctg
      841 gcggccggcc tgaccgggct cgaactgggc agcgacatcg gcggatcgat tcgcgtgccg
      901 gcccattttt gcggcgtgtt tggtcataag ccgacctgga ctttgtgctc aggctatggc
      961 gatcccgcca ccagtcccgc ggcgcccacc gatatcgctt cgcttggacc catggcgcgc
     1021 tcagccgacg atcttgccat cgcgttgaat gtgctggccg gacctgaccc ggacgagacc
     1081 ggactgaagt acgcgctgcc tcccccgcgt gctgcaggcc tgaaggcgct gcgtgtcgca
     1141 gtttggtcgc aggaacccgg ccaggaaacc gacaccgaaa tcgtcggcgc gatcgaggcg
     1201 ctggccacgg aactcgaacg tttcggttgc acggtcggtc gttcggcacg tccggcattc
     1261 gatgcgaccg aggcgtttca tattttcctg caggcgctcg atgccggttg gagcgctcgg
     1321 gcgaccgagg aaatcctgca agcgaaacgg caacgcctcg ccacgctcga cccgcacgac
     1381 atgtctgctg acgcggtgat ggctcgggcg acggacatgt cgcaccggga atggctgatg
     1441 ctgaacgagc ggcgcatgaa gttccgcaga ttatggagcg cattctttcg cgaatgggac
     1501 atcgtgttaa ccccggtgat caacaccgtc gcgttgccgc acatgcagga agacaggtct
     1561 atcgtacagg gacggttaca aggcgttcca cgtcacattc aaacgggacc ggtgtgggaa
     1621 cgtcaggtcg cggtcaatga acgcaccatt gcatataacg atatgtgttt ctggcccggt
     1681 ctcgtaggcg ggtttcacct gcccgtgact gtggtgccta tcggattcac caaatccggc
     1741 ctgccgatcg gcatgcagat ctcgggaccg atctatggcg atcgcacgac gcttatggcc
     1801 gcgtctctgt tcgagcaggc gggtttcacg ttccggccac caaccctcga agcgtaaccg
     1861 gcgctttagc aaatcaaaat cacacatggt atgatccgga tgtgattcgt tcacagggag
     1921 attcgatcca atgcgcctca cccgccgcgc cgcgctgtcg gccgcaactg cgttcgccgc
     1981 gcttcccccg ttacgagccc gtgctcagac gaggccggtg ataaagatcg gtgttatcaa
     2041 cgatcaatct ggaccgtaca aagacctgaa cggcccgacg tcggtcatct gcacaaggca
     2101 ggctgtgctg gaattcaacg ccgctggctt cgatgtcgaa gtcttgtcgg cggataatca
     2161 gaacaagccc gacgtggcgg tcgcgatcgg gcggcagtgg atcgacaccg atggggtcga
     2221 cctgatcatg gattgcgccg cgtcctcggc tgcactcgcg ctggcgtcat tgtgcaggga
     2281 gaaaaacaag atctgcattc cgaccagcac ggcgacctca gatctgaccg gcaaggcatg
     2341 ctcgcccaat acgatccatt gggtgttcga cacgtatatg gaggcgaagt cgaccggcgg
     2401 cgcgatggtc acggccggcg gcgacacctg gtacatgctg tttcccaact acgcattcgg
     2461 tgaggcctta caacgcgatg cctcacgttt cgtgctcgcg gccggtggca aggtgcttgg
     2521 cgcggagacc tatccgttcc cggagaccac cgatttttca gcccagttgg tcaaggcgcg
     2581 aagctccggg gcaaaggtgc tgggattttg tggcgccgga gcggatctgg tgaacgtggt
     2641 caagcaggct gcggagttcg gtctcaacaa gacgatgagt gtcgctgcga tggtggccta
     2701 cactcaggac gtgcgctcga tcggcctgga gggtgcgcaa gggatgaagc tgtcggaatc
     2761 ctattactgg gacctgaacg accgcacgcg atcctttcaa agtcgcattc aacccaaagt
     2821 gaaactgtgg ccaagtatgg cgcaggccgg caattattct gcgacgttgc actacctgaa
     2881 gatcgtgacg gcgatgggcg cagcggcggc caaggcggat ggtgcggcga cagtggcgca
     2941 gatgaagaaa atgccgaccg atgacgattg tttcggtatc ggtcggatcc gcgaagacgg
     3001 gcgaaagatc catccagtct atttgttcga ggtgaagaag ccgtcggaga gcaaacaaga
     3061 gtgggatgtc tacaaactgc ttgccacgac cccggccgaa gaggccttcc gccccctggc
     3121 cgaggacgga tgcccaatga tcaaagctta gcctgagacc tgtccgttct cactgcgcca
     3181 ggaatccgcc atcgattacc agttcggttc ccgtaatgaa cgatgcctcg tccgaggcca
     3241 ggaacagcac accgttggca acatcgatcg gttcacccag ccggcgcaac ggtgtcgcct
     3301 cgatcttcga ggcgcgcatc gcctgattcg tcgcattcag catcggtggc aaatatccag
     3361 gatgcaccga gttgacccgc acaccatgcg gtccataccg gcatgccgcc gctttgctat
     3421 agagcctcac agcgcccttc gatgcagaat atcccgggtg tccgtccgca ctaccaacaa
     3481 accccatgat cgaagaaata ttgacgatgg atcccctccc cgccgtcatc attgccgccg
     3541 ctgccaactt cgtgcccagg aagacacccg tcgcattgac gtcgagcaac ttcttccagc
     3601 ctgcaatgtc atcgtgat
//
LOCUS       DATAVD010001672         2673 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2020049, whole genome shotgun sequence.
ACCESSION   DATAVD010001672 DATAVD010000000
VERSION     DATAVD010001672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2673
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2020049"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VHX39_32155"
     CDS             <1..255
                     /locus_tag="VHX39_32155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995846.1"
                     /translation="TKFDLGKVELFTRLAGAAALLLGASVAGELFTVVPGLPSTAPEQ
                     LLPVAALLVVETIAVSMTVGMWGLAHRILAGLKLRQSSSA"
     gene            complement(266..799)
                     /locus_tag="VHX39_32160"
     CDS             complement(266..799)
                     /locus_tag="VHX39_32160"
                     /inference="COORDINATES: protein motif:HMM:NF025292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin-like domain-containing protein"
                     /protein_id="HEX3995847.1"
                     /translation="MTRRILRKGLASWRRLATWLMVAAMVAPSGAIAQQGVLARQIVG
                     TWEIVSVDIASADGTHVQPFGPKPNGIIMLDASGRYANVFGSPDRPKIRADNRLAITA
                     EQFGAAAKEFAANFGRWSVAETDRTITLQFEGSLDPNNEGARATYSLALAGDDMKFSI
                     TLPGQRVEVVEYRRPGR"
     gene            872..1858
                     /locus_tag="VHX39_32165"
     CDS             872..1858
                     /locus_tag="VHX39_32165"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3995848.1"
                     /translation="MTLRFHTAAVALGFMAFSASAHAQGIDYSKISIVTTQLAPSVYV
                     LTGSPNVDPGHPEGAGGRIGVLVGPDGVLMVDAQYAPLGDKVLAAIRKLSNAPIRFLI
                     DTHEHPDHTGGNPTFAKLGATIFAREETREELAVVLPPPVVKAIGDAADFTDPTRLPS
                     VTYGLGSSVKIYLDGETVDLIPVAASHTDGDTIVRFEQADVMMIGDFYRNYGYPFVDP
                     SHGGTIRGVLSAIDQTLALAGPGTILAPGHGSVVTRDRLGGYRKMIADMIDKVQAQIN
                     AGNSLKQILAAKLTAPYDASVPGGLDVLPAGLGTSADRFVGEIFAELSGHGG"
     gene            1946..2443
                     /locus_tag="VHX39_32170"
     CDS             1946..2443
                     /locus_tag="VHX39_32170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995849.1"
                     /translation="MEIATMVTGLLVSLLVYSLIAVWYVVPWLKKLDKRQALTAPLWI
                     HAFRYVTLYLLVAQREGYAISDQTLRVVVIGDLSGAALALIGIIFLRMRSRLGPVFAA
                     LVLIASIADFAVGTYVRSQVGQDPEATGVWWLVFVFFAPLVLVTLPLLGWQLYQRRGE
                     ALSRG"
BASE COUNT          490 a          834 c          798 g          551 t
ORIGIN      
        1 acgaagttcg atctaggcaa agtcgaactt ttcaccagac tggcaggagc cgcggcgctg
       61 ctccttggcg catccgtcgc gggcgaactc tttaccgtag tgccaggatt gccatcaacc
      121 gcgccggaac aacttctccc ggtcgcggcg ctcctcgtcg tcgagaccat agcggtttcg
      181 atgacagttg gcatgtgggg cttggcgcac cgcattctcg ctggtctgaa attgagacag
      241 tccagcagcg cttagtattg ctgcgctatc taccgggtcg ccgatactca acgacctcga
      301 cgcgttgacc gggcagagtg atcgaaaact tcatgtcatc gcctgcgagc gccagggagt
      361 acgtcgccct ggcgccttca ttgttgggat ccagtgaccc ctcaaactgc agcgtgatcg
      421 tcctgtccgt ttctgcgacg gaccacctgc cgaaatttgc ggcgaactcc tttgccgccg
      481 cgccaaattg ctcagccgtt atcgcgagcc ggttgtctgc gcgtatcttt gggcggtctg
      541 gacttccaaa cacgtttgcg tagcggccgc tggcatcaag catgatgatc ccattcggct
      601 tcggcccgaa gggctggaca tgtgtgccat cggccgaagc gatgtctacc gacacaattt
      661 cccacgttcc gacgatctgt cgcgcgagca cgccctgctg ggcgattgcc ccgctgggcg
      721 ccaccatcgc agcaaccatc agccacgttg cgaggcgtcg ccacgaggcc aggcccttcc
      781 gcaaaatcct gcgcgtcatc tgctgatacc tcctggctct tgatacatag caatacgagg
      841 catagatatg tgaggcaaca ggagattgct catgaccctt cggttccaca ccgcggctgt
      901 cgccctcggt ttcatggcgt tcagcgccag cgcccatgcg cagggtatcg actactcgaa
      961 gatcagcatc gtcacgacgc agctggcgcc gagcgtctac gtgctcacag gcagcccaaa
     1021 tgtagacccc ggacacccgg aaggcgctgg tggccgcatc ggtgttctgg tgggaccgga
     1081 tggcgtgctg atggtcgatg ctcaatatgc gccgcttggc gacaaggtgc ttgcggccat
     1141 ccggaagctc agcaacgcac cgatcaggtt cctgatcgac acgcatgagc acccggacca
     1201 caccggaggc aacccgacct ttgccaaact tggcgcaacg attttcgcac gggaggagac
     1261 ccgcgaggag ttggccgtcg tcctgccgcc gccggtcgtc aaggccatag gcgacgccgc
     1321 cgacttcacc gacccgacgc gcctgccgtc cgtcacctat ggccttggca gctcggtgaa
     1381 aatatatctg gatggcgaaa cggtggacct gatccccgtg gcggcgtcgc acaccgacgg
     1441 cgacaccatc gttcgcttcg agcaggccga cgtcatgatg atcggcgatt tctaccgcaa
     1501 ctacggctac ccgtttgtcg atccatcgca tggcggcaca atcaggggcg tcctttccgc
     1561 catcgatcag acgctggctc tggccgggcc gggcacaatc ctggcgcccg gccacggatc
     1621 ggtcgtcacg cgagatcgcc tgggcggcta tcggaagatg atcgccgata tgatcgacaa
     1681 ggtgcaggcg caaatcaatg ccggcaacag tctcaagcag atcctcgccg caaaactgac
     1741 cgctccctac gacgcctcgg tgccaggcgg cctcgatgtc ctccccgccg gccttggcac
     1801 gagtgcggat cgcttcgtgg gcgagatctt cgctgagctt tcgggccacg ggggctagta
     1861 ggccacacag tgtcttagcg gtcgtcatct caagccagct gcccaacgtg gcagaggtgt
     1921 agcgacgcgt tgtttcgaac catcaatgga gattgccacg atggtaaccg gtctactcgt
     1981 cagccttctg gtctatagtc taatcgcagt gtggtacgtc gttccttggc tcaagaagct
     2041 ggacaagcgc caggcgctga ccgcgccttt gtggatccac gctttccggt atgtcacgct
     2101 ctatctcctg gttgctcagc gggaggggta tgcgatctct gaccaaacat tgagagtggt
     2161 cgtgatcggg gacctcagcg gagccgcgct tgccttgatc ggcatcatat tcctgcggat
     2221 gcgctcgcgt ctgggtccag tctttgccgc gctggtcctc attgcgtcga tagccgattt
     2281 cgccgttggc acatacgtca gaagtcaagt cgggcaagac cccgaggcaa ccggcgtgtg
     2341 gtggctagtc tttgtcttct tcgctccgct cgtccttgtc actctgcctc ttctagggtg
     2401 gcaactttac cagcggcgag gggaagcgct gtcccgcggc tgacaagatt tggcattgtg
     2461 ggtgcaactc ggcaggctgg gagcggccct tcgagcgaac gacgcgcgga acctgagtgc
     2521 agacggaaga gtccgctgtt ggcgcatagc ggtcgtcatc ctatgactgc aatagcccaa
     2581 agccgacgtg gccgatcgcg gccatcacca gcgcggcgaa ggggcgagtt ttgagcgcct
     2641 cctcaaatga ggcctgctgt attgtgctag cat
//
LOCUS       DATAVD010001673         2062 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2765078, whole genome shotgun sequence.
ACCESSION   DATAVD010001673 DATAVD010000000
VERSION     DATAVD010001673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2765078"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..251
                     /locus_tag="VHX39_32175"
     CDS             <1..251
                     /locus_tag="VHX39_32175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995850.1"
                     /translation="SRVHRPEKAAQVMSRRTAQVWYLAELLRIKGEVLLPVYEKFTDG
                     LAATDMRAARALLDALPTLVGNADATLWLRYRKKTNPS"
     gene            315..1268
                     /locus_tag="VHX39_32180"
     CDS             315..1268
                     /locus_tag="VHX39_32180"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3995851.1"
                     /translation="MSTIELIDPELRDALAQWPQLPLTAETLAQRRASGLTLLAGESK
                     PDLPDIVTGEIQVESAFGAKPIRVLTYRPVRSEAPLPVILHIHGGGFVMGTPEMKDVE
                     NRLFALELKCAIYSVDYRLAPEAPHPGPLEDIYSVFVWLHANAARLGLDTGRIGIKGE
                     SGGSGFAAGVALYARDQPGPKFSFQHLIYPMIDDRSAVRQDLHPHVGEFVWTQKNNYF
                     GWHSLLGKEPGSDGVSPYAAAARATDVAGLPPTYISVGGLDLFLEENMTYADRLSRAG
                     VPVEFHMYPGAYHGFYRATTARVTKQAEHDTREALRRFLHG"
     gene            complement(1330..>2062)
                     /locus_tag="VHX39_32185"
     CDS             complement(1330..>2062)
                     /locus_tag="VHX39_32185"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995852.1"
                     /translation="FAMWTLTDRPENAKFLTDQEKALIQEDMEADRRARVTTASVTIM
                     ETLKNPRVWLMVVIYFCSVFLNVNNIWFPTILKSVGMTSVANIGYVLSLAWAFGSIVV
                     LVVCRNSDRVGERKWHLLTTGLIAVAAYWALPLAHGSVTATAVLLGIGLAFAYSNFMV
                     FWTIPPAFLEARAAAMGIALISSVAQLGGLSGPAVVGWIFQRTGSIYIGYAIAATALL
                     TGTLLATFAIPHTRLRKPGQVAAGE"
BASE COUNT          423 a          625 c          611 g          403 t
ORIGIN      
        1 aaagccgggt gcaccggccg gagaaggcgg cccaggtgat gagccgacgg accgcacagg
       61 tgtggtacct tgccgaactt ctccgcatta agggtgaggt tctgctgccg gtctatgaga
      121 agttcaccga tggccttgcc gcgactgata tgcgtgccgc ccgggccttg cttgatgcgc
      181 tgccgacgct ggttgggaac gcggacgcga cgctctggct tcgctatcgg aagaagacca
      241 atccgtcctg agttgtcacg cggcaacgac tgccttaacg ttttgctcag cttcaataga
      301 cccggtcgcc atccatgagc acaatcgaac ttatcgaccc cgaattgcgc gatgcgctcg
      361 cgcaatggcc acaattgccg ctgacagccg agactttggc tcagcgccgc gccagtgggc
      421 tcacgttatt agccggcgag tcgaaaccgg acctgcccga catcgtgacc ggggagatcc
      481 aggtagaaag tgcgtttggt gcaaagccga tccgtgttct gacctatcgc ccagtcagat
      541 ccgaggcccc gcttcccgtc atccttcaca tccatggtgg cggcttcgtg atgggcaccc
      601 cggaaatgaa ggatgtggag aaccggctgt tcgcgttgga gctgaaatgc gcgatctatt
      661 ccgtggatta tcgccttgcg cccgaagcac cgcacccagg gccgctggag gacatttatt
      721 cggtgttcgt ttggctgcac gccaacgcgg cccggcttgg gcttgatacc ggccgcatcg
      781 gtatcaaggg agaaagcggc ggcagcggtt ttgcagcagg cgttgcgctt tacgcccgcg
      841 atcagccggg accgaaattc tcatttcagc atctgattta tccgatgatc gacgaccgct
      901 cggcggtgcg ccaggatctg catcctcacg tcggcgaatt tgtttggaca cagaagaaca
      961 actatttcgg ctggcattcc ttgctcggca aggagccggg ttcggatggc gtgtcgccct
     1021 atgcggcggc agcacgagca acggatgtgg cgggcttacc gccaacgtac atttcagtcg
     1081 gcggtctgga cttgtttctc gaagaaaaca tgacctatgc ggatcgattg agccgcgccg
     1141 gcgtgccggt cgaatttcac atgtatccgg gcgcgtatca cggcttctat cgcgcaacga
     1201 ctgcccgtgt gaccaaacag gccgagcacg acacgcgcga ggcgctgcgc cgctttttgc
     1261 acgggtagcg cgctgcactg gttccgtcgc cggctgggtg gcaatccagc ccgcagcgga
     1321 tcaatgtgat tactctccgg ctgccacctg cccaggcttt cgcaatcgcg tatgcggtat
     1381 tgcgaacgtt gccagcagcg taccggtcag caacgccgtc gcggcaatcg cgtagccgat
     1441 gtaaatgctg ccggtccgct gaaaaatcca acccacaacg gctggtcccg acaggccacc
     1501 caattgcgca accgaactga tcaatgcgat tcccatggca gcggctcgcg cctcaaggaa
     1561 cgccggcggg atcgtccaga acaccatgaa gttggaataa gcaaacgcca gcccgatgcc
     1621 gagcagcacg gccgtcgcag tgacgctgcc atgcgccaac ggcagcgccc agtaggccgc
     1681 caccgcgatg aggccggttg tcagaaggtg ccatttccgc tcccccaccc gatcggagtt
     1741 gcggcacaca acgagaacca caatcgagcc gaaagcccag gcgagggaca ggacatagcc
     1801 aatgttcgcg accgaggtca tgccgacaga tttcaaaatc gtcggaaacc agatgttgtt
     1861 gacgttcaga aataccgaac agaaataaat caccaccatc agccagacgc gagggttttt
     1921 taacgtttcc atgatggtga cggaagctgt ggtgacccgg gctcgccggt cggcttccat
     1981 gtcttcctgg atcagcgctt tctcctgatc ggtcagaaac ttcgcatttt ccggccggtc
     2041 ggtcagagtc cacatcgcga ac
//
LOCUS       DATAVD010001674         1831 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1088741, whole genome shotgun sequence.
ACCESSION   DATAVD010001674 DATAVD010000000
VERSION     DATAVD010001674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1088741"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            139..1731
                     /gene="guaA"
                     /locus_tag="VHX39_32190"
     CDS             139..1731
                     /gene="guaA"
                     /locus_tag="VHX39_32190"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEX3995853.1"
                     /translation="MPDSMSDPVAPDPAATVERVLVLDFGSQVTQLIARRLRESGVYC
                     EIWPFNTDPARIAAFKASAFILSGGPASVHEGESPRAPQLVFEQGVPVLGICYGQMVM
                     CAQLGGETQPADHREFGRAFVEVTGDCALFDGVWHKGAHEQVWMSHGDRVTKLPQGFR
                     VVASSEGAPFAVFADDERRFYGVMFHPEVMHTPHGAKLLRNFTHKVAGLSGSWTMAGF
                     RAAQVARIREQVGSGRVICGLSGGVDSSVAAVLIHEAIGEQLTCIFVDHGLLRMSEAD
                     DVVATFRDRFNIKLVHRDASELFLGALDGVTDPELKRKTIGRLFIEVFEEEAARIGGA
                     DFLAQGTLYPDVIESVSFTGGPSVTIKSHHNVGGLPERMRMKLVEPLRELFKDEVRAL
                     GRELGIPDIIVGRHPFPGPGLAIRILGAVTHEKADILRKADAVYLEEIRAAGLYDAIW
                     QAFAVLLPVRTVGVMGDGRTYDSVCALRAVTSTDGMTADVYPFEMAFLTRVAGRIVNE
                     VRGVNRVAYDITSKPPGTIEWE"
BASE COUNT          328 a          532 c          596 g          375 t
ORIGIN      
        1 agcgcgggtg aattcatttg ggcgggcgcc acgaaccggc cgcacccggg atgattgcga
       61 acttgtagcc atcacaccct tgccagcccc gtccgatccg tggtccaagc cggcgatcac
      121 gcctggaccg agaccgtaat gcccgactcc atgtctgatc ctgtagcccc ggatcccgct
      181 gccaccgtcg aacgcgtcct ggtgctcgat ttcggcagcc aggtgacgca gttgattgcg
      241 cgccgcctgc gcgagtccgg cgtctactgt gaaatctggc cgttcaacac cgatcccgca
      301 cgcattgccg cattcaaggc cagtgccttc atcctgtccg gcggtccggc tagtgtgcac
      361 gaaggagagt cgccccgtgc gccgcaattg gtattcgagc aaggcgtccc cgtcctcggc
      421 atttgctacg gccaaatggt catgtgtgcg caactgggcg gtgaaacgca gcccgccgat
      481 catcgcgaat ttggccgcgc cttcgtcgag gtaaccgggg actgcgctct gttcgacggc
      541 gtctggcaca aaggcgctca cgagcaggtc tggatgagcc acggcgaccg cgtgacaaag
      601 ctgccgcagg ggtttcgggt cgtcgcctcg tcggagggtg cgccgttcgc ggtgttcgcc
      661 gatgacgaac gccggttcta cggcgtgatg tttcacccgg aggtcatgca caccccgcac
      721 ggtgcaaagt tgttgcgtaa cttcacccat aaggtcgccg gcctttccgg gtcgtggacc
      781 atggctgggt tccgcgccgc ccaggtggcc cggatcaggg aacaggtggg ctccgggagg
      841 gtgatttgcg ggttgtccgg cggggttgat tcttccgttg ccgcggtgct gatccatgag
      901 gcgatcggcg agcaactgac ctgcattttc gtcgatcacg gcttgttgcg gatgagcgag
      961 gctgacgacg tcgtcgcaac gtttcgcgac cggttcaaca tcaaactggt gcatcgtgac
     1021 gcatccgagc tttttctggg agcattggac ggcgtcaccg atccggaact gaaacgcaag
     1081 accatcggcc ggctgttcat cgaagtgttc gaggaggagg cggcgcggat cggtggtgcc
     1141 gattttctcg cgcagggaac tttgtatccg gacgtgatcg aaagtgtgag ctttacgggc
     1201 ggcccatcgg tcaccatcaa gtcgcatcac aacgtcggtg gcttgccgga acggatgcgc
     1261 atgaagctgg tcgaaccgtt acgcgaactg ttcaaggacg aggtgcgtgc tctgggccgc
     1321 gaactaggca ttcccgacat catcgttggc cggcacccgt ttcctgggcc tggtctggcg
     1381 attcggatcc tcggggcggt gacgcacgag aaggcagaca ttctgcgcaa ggccgatgcc
     1441 gtctatttgg aagaaattcg tgccgctggg ctgtatgatg cgatctggca ggcgtttgcc
     1501 gtgttgttgc cagtgcgcac ggtcggcgtt atgggcgacg ggcggactta tgacagcgtc
     1561 tgcgcgctgc gtgcggtgac cagcacggac ggcatgacgg cggatgtcta tcctttcgag
     1621 atggcgttcc tgacccgggt tgccggacgg atcgtcaatg aggtcagggg cgtcaaccgg
     1681 gtcgcctacg atattaccag caagccgcca ggaacgatcg agtgggaatg attttggccc
     1741 atccgggggt atcccacagc gtcccggaaa cctccataat acactgataa acaaaatgaa
     1801 atcagtcaaa gacgttcggg gactatcggc t
//
LOCUS       DATAVD010001675         4794 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1088779, whole genome shotgun sequence.
ACCESSION   DATAVD010001675 DATAVD010000000
VERSION     DATAVD010001675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4794
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1088779"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..275)
                     /gene="nrfD"
                     /locus_tag="VHX39_32195"
     CDS             complement(<1..275)
                     /gene="nrfD"
                     /locus_tag="VHX39_32195"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEX3995854.1"
                     /translation="MNEQSAWDGRTYYGEPQLRAAPFNKALVGSYIFLAGLSGAAQLL
                     AAMMDFACGPGAAPTVRRGRYLAMLAPTLGTACLILDLHTPRRFYNM"
     gene            complement(288..1172)
                     /locus_tag="VHX39_32200"
     CDS             complement(288..1172)
                     /locus_tag="VHX39_32200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX3995855.1"
                     /translation="MSVHPRALEHPQSSLLGMIPDESELTAGCKITAGKQYGFFTDTT
                     LCIGCKACEVACKEWNGLPADHLTITGMSYDNTTALSADSWRHVKFIETGVRDDVAQP
                     FQSGWLMMSDVCKHCHNAPCLEACPTGALFRTEFDTVVVQQDICNGCGYCVPACPFGV
                     VDISVLDGKAHKCTLCYDRLKGGLEPACAKACPTDSIQFGELGELQERARRREAELHR
                     RGIASAYLYGAPSTPGATGGLEHLNAFFLLTAPPETYNLPRAPTRPANRVVPSLAAGL
                     VTILGLAVMAFSLFTRKA"
     gene            complement(1169..4639)
                     /gene="fdh"
                     /locus_tag="VHX39_32205"
     CDS             complement(1169..4639)
                     /gene="fdh"
                     /locus_tag="VHX39_32205"
                     /EC_number="1.17.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_271413142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase"
                     /protein_id="HEX3995856.1"
                     /translation="MSLDTVIGRVSITQEDRFLLEGEQGGHKLFLLAHGSLLTPEDLR
                     ELCRTQQKLRVSFSSPENLIAGVAHNVEAADGNGLAAAHGLAATVRGFFCNWSLPRQM
                     VGQSLRSDAAKSTESERLRPRLMEADKVGTSICAYCAVGCAQLVYAKGGKVIHVEGDP
                     RSPINQGTLCPKGAATLDLLTSPLRLTTVLYRAPGSDHWENKPLDWAMDRIAKLMKQA
                     RDETFVTHLPNGTKVNHTLAIGSLGGATLDNEENYLIKKLLCGGLGLVWIENQARVCH
                     SASVPSLGATYGRGAATLAEWDLANSDCVVVMGSNMAENHPIAFRFVMQAKEKGATVI
                     HVDPRFTRTSALADIYAPIRTGSDIAFLGGIIHYLLENDLWFKEYALNYTNIATIIDE
                     RFKDADQGDGVFSGWDSDKRAYTYESWQYQGEEVPSSLAEHSVNTTESFSEKTKRMES
                     GPPPQDRTLQHPNCVYQILRRHYARYTPDMVERVTGCPQATFVKIAEALAQNSGRERT
                     SAFCYAVAWTHHTTGVQIIRTAGIIQALLGNPGRPGGGILALRGHCSIQGSTDVPTLY
                     NMLPTYLPQPQAYKSHDTFDNYLKCEATPTGWWHNFPKYAVSLLKAWYGENSRADNGW
                     GHDWLPKIVGDHSQLPMTLAMRDGTIRGMMFLGQNPVIGGSNSQLIERGLANLEWMVV
                     RDITETETAGFWRAGQLVRKGELKTEDIKTEVFLMPGSLAGEKAGTFTNTHRLIQWHD
                     KVVDAPGDNRSELWFVYHLGRKLRELYAGSAAPQDQALLNLTWDYPLEDARGEPSAEA
                     VLKEMNGYTVADRKQVKKFQELKDDGSTACGAWLYSGIFPDDNDNKSRSRKPDGPDGP
                     GTHLHWAYSWPGNRRNMYNRASADPQGKPWSERKKLMWWDAGKKEWDGYDSLDFEPTK
                     PPDYEPDWSKKPEGMEALDGRAAFIMIADGRASLFVPTGLKDGPLPTHYEPVESPVRN
                     PMYGQQDNPVAKKWERDDNRYHAVADELYPYALTTYRLTEHHSGAIPTRIVPVTAELQ
                     PEGFAEMPPELASQLGIESLDWVVLSTARGEIETRALVTKRLRPFMIDGRVIYQIGML
                     WHYGWSGYATGDIANALTAVVGEPNTSIHENKSLTCNLRKGRIDRGAPQSKPVDHARL
                     VDTVIERDRP"
BASE COUNT          888 a         1447 c         1486 g          973 t
ORIGIN      
        1 aacatattgt agaagcgccg aggcgtatgc aggtccagga tcagacacgc cgttcccaat
       61 gtgggcgcca gcattgccag atagcgtccg cgccggacgg tcggcgccgc gcctggcccg
      121 catgcaaagt ccatcatggc cgccagtaac tgtgccgcgc ccgataggcc cgccagaaaa
      181 atgtagctgc cgacgagcgc tttattgaac ggcgcggccc ggagctgcgg ctcgccgtag
      241 taggttcgtc catcccacgc ggattgttcg ttcatgtccg cctgcctcta tgccttgcgt
      301 gtgaacaggg agaacgccat gacagccaga ccaaggatgg tgacgagccc agccgccagg
      361 ctcggaacga cgcggtttgc cgggcgtgta ggagcgcgcg gcagattgta agtctcgggt
      421 ggtgcggtca gcaggaagaa tgcattcagg tgctccaggc cgcccgtggc tccgggcgta
      481 cttggcgcgc catagagata ggcgctggct ataccacggc gatgcaactc cgcctcgcgc
      541 cgcctggcgc gctcctgcag ctcacccagt tcaccgaatt ggatggagtc cgttggacag
      601 gccttggcgc aggccggttc caaaccacct ttgagccgat catagcacag ggtgcacttg
      661 tgcgccttgc cgtccaacac gctgatatcg acgacaccga acggacacgc aggcacgcaa
      721 tagccgcagc cgttgcagat gtcctgctgc accacgacgg tgtcgaactc ggtgcgaaac
      781 agcgcgccgg tcggacatgc ctccaggcag ggtgcgttgt ggcagtgctt gcagacgtcg
      841 ctcatcatca gccagccgct ctggaacggc tgggccacgt cgtcccgtac gccggtctcg
      901 atgaatttga cgtggcgcca ggaatcagcg gacagcgcgg tggtattgtc gtagctcatg
      961 ccggtgatcg tcagatggtc ggccggcagc ccattccact ccttgcaggc gacctcgcac
     1021 gccttgcagc cgatgcaaag cgtcgtgtcg gtgaagaacc cgtattgctt cccagccgtg
     1081 attttgcagc ctgccgtcaa ctccgactcg tccgggatca tgcccaacaa cgaagattgc
     1141 ggatgttcga gagcgcgcgg atgaacactc atgggcggtc ccgctcgatc actgtgtcga
     1201 ccagccgcgc atgatcgaca ggcttggact gcggcgcacc gcggtcgatg cggcctttgc
     1261 gcaaattgca ggtcagtgac ttgttctcat ggatgctggt gttgggctcg cccaccacgg
     1321 ctgtcagggc gttggcgatg tcgccagtcg catagcccga ccagccgtag tgccacagca
     1381 tgccgatctg atagatgacc cggccgtcga tcatgaatgg ccgcagcctt ttggtaacca
     1441 gcgcacgtgt ttcgatctcg ccgcgcgccg tcgaaagcac cacccaatcc agggactcga
     1501 tcccgagctg gcttgccagc tcaggcggca tctcggcgaa accctcgggc tgcaattcgg
     1561 cggtcaccgg cactatgcgg gtcggtatgg cacctgaatg atgctcggta aggcggtacg
     1621 tcgtgagtgc atacggatag agttcatcgg cgacggcgtg atagcgattg tcgtcgcgct
     1681 cccatttctt ggcaaccgga ttgtcctgtt ggccgtacat tggatttctg accggagact
     1741 cgaccggttc gtagtgcgtt gggagcgggc cgtccttcag gccggtcggc acgaacagcg
     1801 aggcgcggcc atcagcaatc atgatgaagg cagcgcggcc gtcgagtgcc tccatgcctt
     1861 ccggcttttt tgaccagtca ggctcataat ccggcggctt ggtcggctcg aagtcgagcg
     1921 aatcgtagcc atcccactcc ttcttgccgg catcccacca catcagcttt ttgcgctccg
     1981 accatggctt gccctgcggg tcggcggagg cgcggttata catgttccgc cggttgcccg
     2041 gccaggaata ggcccaatgc agatgcgtgc cgggcccgtc cggtccgtcg ggtttgcggg
     2101 agcgagactt gttgtcgttg tcgtcaggga agatgccact gtagagccaa gccccgcagg
     2161 ccgtggatcc atcgtccttc aattcttgga attttttgac ctgcttgcga tctgcgacgg
     2221 tatagccatt catctccttg aggacagcct cggccgaggg ctcaccgcgg gcatcttcga
     2281 gcggatagtc ccaggtgagg ttgagcagcg cctgatcctg cggcgctgcg ctgccggcgt
     2341 agagctcgcg cagtttgcgg ccgaggtgat agacgaacca aagctcggac cggttatcgc
     2401 caggggcgtc gacgaccttg tcgtgccact ggatcaagcg gtgggtgttg gtgaaggtgc
     2461 cggccttttc gccggcgagc gaaccgggca tcaggaacac ctcggtcttg atgtcttcgg
     2521 ttttcagttc gcccttacga acaagttggc cggcgcgcca gaatccggcg gtctccgtct
     2581 cggtgatatc gcggacaacc atccattcca ggttggcaag cccacgctcg attaactgag
     2641 aattgctgcc gccaatgacc ggattctggc caaggaacat catcccgcga atggtgccgt
     2701 cgcgcatcgc cagcgtcatc ggcaattgcg aatggtcgcc gacaatcttc ggcagccagt
     2761 cgtgtcccca gccgttgtcg gcgcgcgaat tctcgccgta ccaagctttc aggaggctca
     2821 cggcgtattt tggaaagttg tgccaccacc cggtcggcgt ggcttcacac ttcaggtaat
     2881 tatcgaacgt gtcatgcgac ttgtacgcct gcggttgcgg cagataggtt ggcagcatgt
     2941 tgtagagcgt cggcacatcg gtactgccct ggatgctgca atgaccgcgc aacgccagga
     3001 tccctccccc tggacgcccg ggattgccaa gcaaagcctg gatgatgccg gcggtccgga
     3061 tgatctggac accggtggtg tggtgcgtcc aggccaccgc atagcagaac gcactagtcc
     3121 gctcccggcc ggaattttga gccagcgctt cagcgatctt gacgaatgtt gcctgaggac
     3181 agccggtcac ccgctcgacc atgtcggggg tgtaacgcgc gtaatggcgg cgtagaatct
     3241 ggtacacgca gttcggatgc tggagcgtgc gatcctgggg cggcggacca gactccatac
     3301 gcttggtctt ttcgctgaag gactcggtgg tgttgacaga gtgctccgcc agtgacgaag
     3361 gaacctcttc gccttggtac tgccatgact cgtacgtgta ggcgcgcttg tcgctgtccc
     3421 atcctgagaa cacgccgtcg ccttgatcgg cgtccttgaa gcgttcatca atgatggtgg
     3481 caatgttggt gtagttgagc gcgtattcct tgaaccaaag atcgttctcc agcaggtaat
     3541 ggatgatccc gccgagaaag gcgatgtcac tgccggtgcg gatcggggca taaatgtcgg
     3601 ccagcgccga ggtccgcgta aaccgcgggt cgacgtgaat gacagtggcg cctttttcct
     3661 ttgcctgcat cacgaatcgg aaagcgatgg gatgattctc ggccatgttg gagcccatca
     3721 ctacgacgca atctgagttg gcgagatccc attcagcgag cgtcgcggcg ccacggccgt
     3781 atgtcgcacc gaggctcgga acggaggcgc tgtggcaaac gcgggcctga ttctcgatcc
     3841 acaccaagcc gagcccgcca catagtagct tcttgatgag atagttctcc tcgttgtcga
     3901 gggtggcgcc gccaagcgat ccgattgcca aggtgtggtt cacctttgtt ccgtttggaa
     3961 gatgggtgac gaaggtctcg tcacgggctt gcttcattaa cttggcgatg cggtccatcg
     4021 cccagtccaa gggcttgttt tcccaatgat cggaccccgg cgcccgataa agaaccgtgg
     4081 tcaggcgcaa agggctggtg agaagatcaa gcgtggctgc gcccttaggg cacaaggtgc
     4141 cctggttgat ggggctgcgc ggatcgccct caacgtgtat gaccttgccg cccttggcat
     4201 acaccaactg ggcgcagccg acggcgcaat acgcgcaaat gctggtgccg accttgtcgg
     4261 cctccatcag ccgtggccgc agccgttccg actcggtgct cttggccgca tcggagcgca
     4321 agctttggcc taccatttgc cggggcaatg accaattgca gaaaaagccc cggaccgttg
     4381 ctgccaaacc gtgcgctgcg gctagaccat tgccgtcggc cgcctcgacg ttgtgggcca
     4441 ccccggcgat caaattctca ggcgaactga agctgaccct caatttttgc tgggtgcggc
     4501 acagctcccg caaatcttcc ggagtcagaa gcgagccgtg agcgagtaga aagagcttgt
     4561 ggcctccttg ctcgccttca aggaggaacc ggtcctcctg ggtaatcgag acgcggccga
     4621 taaccgtgtc gagagacatc cgacgccccg ccactctgct ggaaagagaa tcgtcaatgt
     4681 cggaaacggc ggaaacccag agcggttcca atatggcccg cgcgctcctc tgccgaaatg
     4741 tgcacgaaca gtctcgcccg ccgccactgt tcggctgaat aaggccgtaa ccct
//
LOCUS       DATAVD010001676         2164 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3134024, whole genome shotgun sequence.
ACCESSION   DATAVD010001676 DATAVD010000000
VERSION     DATAVD010001676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3134024"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..983
                     /locus_tag="VHX39_32210"
     CDS             <1..983
                     /locus_tag="VHX39_32210"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX3995857.1"
                     /translation="LRLDLRQPEGREILTQLIRQSDVLVENFRPGVLARVGFPAAQLR
                     ELRPSLVVCSINGFGSEGPYKDRPAFDFIAQAMSGFMSVNGTEDGEPLRSGVPISDLV
                     AGLYAALAITASVLRARETGKGEIVEVSLTNAMVSMLAYIATNYFATGITPPRSGNDH
                     PIAAPYGLFPTRDGRIALAPADDAFFGRLMDVLGYAELKDDPLYRTQSARVANRERIN
                     AIVGGKLALQTTAHWVETLNVAGVPSGPVHAVADVFTDPQIQAQNMVVEMQQPGYGRV
                     RMLGFPMKFSGTPCGIRRPAPNLGQHSEEVLAELGFSADQCQALRDKGVI"
     gene            987..>2164
                     /locus_tag="VHX39_32215"
     CDS             987..>2164
                     /locus_tag="VHX39_32215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046556 - alpha-L-arabinofuranosidase
                     activity [Evidence IEA];
                     GO_process: GO:0046373 - L-arabinose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-arabinofuranosidase C-terminal
                     domain-containing protein"
                     /protein_id="HEX3995858.1"
                     /translation="MREVHADLHAGLAIGETDPRLFGAFIEHLGRCVYGGIYEPEHPT
                     ADANGFRQDVLALVRELAPTIMRYPGGNFVSGYNWEDGVGPVANRPKRLDLAWLSTET
                     NEFGTNEFIDWCRLAGTEPMLAVNLGTRGADAARQYLEYCNHPYGTTLSDLRRAHGWD
                     APHGVRFWCLGNEMDGPWQMQARTAEEYGRVAVETAKMLKWIDPSIELAACGSSGRNM
                     PTFGTWERTVLEHCFDHVEYISLHTYLNNYADDMPAFLASPDLMDNFIDEVVAIADSV
                     AAVRRSGKRIMLSFDEWNVWYRTRRNRLQRTLPGWPVAPPILQEIYTMADALAFGGAC
                     IALLNHADRVKVACLAQLVNVIAPIMTEDGGPAWRQTIFYPFAQMSHFGRGRVLRAVI
                     "
BASE COUNT          397 a          651 c          690 g          426 t
ORIGIN      
        1 ccctgcgtct ggatctgcgg caaccggaag gccgtgagat cctgacgcaa ttgatccggc
       61 agtccgatgt gctggtggaa aacttccgac ctggtgtgct cgcccgtgtg ggtttccctg
      121 ccgcacagct gcgcgaattg cggccatcgc tggtggtgtg ttcgatcaac ggttttggca
      181 gtgaaggccc ctataaagat cgtcccgcat tcgattttat cgcccaggcg atgagcgggt
      241 tcatgagcgt gaatggcacc gaggatgggg agcccttgcg gtccggcgtg ccgatcagcg
      301 acctggtcgc ggggttgtac gctgcgttgg cgatcaccgc ctcggtgctg cgggcgcggg
      361 agaccggcaa gggcgaaatc gtcgaggtca gcctgaccaa cgccatggtc agtatgctgg
      421 cgtatatcgc aacgaattat tttgccaccg gcatcacgcc gccacgcagc ggcaacgatc
      481 acccaattgc cgcgccgtat ggcctgttcc ccaccagaga tggccgcatc gctctggcgc
      541 ccgcggatga cgcgtttttt ggccggctga tggacgtatt ggggtatgcc gaactgaaag
      601 acgacccgtt atatcgcacg caatctgcac gggtcgccaa ccgggagcgg atcaacgcca
      661 tcgttggcgg caagcttgca ttgcagacca ccgctcattg ggtcgaaaca ttgaacgtgg
      721 cgggcgtgcc gagcggaccg gtgcacgccg tggccgatgt tttcacggac ccgcaaatcc
      781 aggcgcagaa catggtggtg gagatgcagc aaccgggtta tggccgagta cgcatgcttg
      841 gctttccgat gaaattttcc ggcacgccct gtggaatccg ccgcccggcg cccaatctgg
      901 gccaacactc ggaggaagtg ctggcggaac ttggcttttc cgccgaccag tgccaggcgt
      961 tgcgcgacaa aggggtcatc tgaccgatgc gcgaggtgca cgccgacctg cacgccggtc
     1021 tggcgatcgg tgagaccgac cctcgcctgt tcggcgcctt catcgaacac ctcggccgct
     1081 gcgtttatgg cggcatttac gaaccggagc atcccaccgc cgacgccaat gggtttcgcc
     1141 aggatgtgct ggctttggtg cgcgaattgg cgccgacgat catgcggtat cccggcggca
     1201 acttcgtcag cggctacaac tgggaagacg gtgtcggtcc ggtcgcgaac cgtcccaaac
     1261 ggctcgatct cgcctggctg tccaccgaaa ccaacgagtt cggtacgaac gaattcatcg
     1321 actggtgccg gctggccggg accgagccaa tgctggccgt caatctcggc acccgcggtg
     1381 ccgacgccgc gcggcaatat ctggagtatt gcaaccatcc gtacggcaca acgttatcgg
     1441 atctccgccg cgcgcatggt tgggacgcgc cgcacggggt gagattctgg tgcctcggca
     1501 acgagatgga cgggccgtgg cagatgcagg cgcgcaccgc cgaggaatac ggccgcgtcg
     1561 ctgtcgaaac cgcgaaaatg ctgaaatgga tcgatccgtc gatcgaactg gcggcctgcg
     1621 gatcgtccgg ccgcaacatg ccgacgtttg ggacctggga acgcacagtg ctcgagcatt
     1681 gcttcgatca cgtcgagtac atttcgttgc acacctattt gaacaattat gcggatgaca
     1741 tgccggcgtt tctggcatcg cccgacctga tggacaattt catcgacgaa gtcgtagcga
     1801 tcgccgactc ggttgccgct gtccgacggt ccggtaagcg tatcatgctc agcttcgacg
     1861 agtggaacgt ctggtaccgc acacggcgca accgattgca acgcacgttg cccggctggc
     1921 cggtggcgcc gccgatattg caagaaattt acacgatggc ggatgctctg gcgtttggcg
     1981 gcgcctgcat cgcgttgttg aaccacgccg accgggtgaa ggtcgcctgc cttgcccaac
     2041 tggtcaacgt gattgccccg atcatgaccg aggacggcgg tccggcttgg cggcagacca
     2101 tcttttaccc gtttgcgcaa atgagtcatt tcggtcgcgg ccgggtgttg cgtgccgtaa
     2161 tcga
//
LOCUS       DATAVD010001677         1684 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1088877, whole genome shotgun sequence.
ACCESSION   DATAVD010001677 DATAVD010000000
VERSION     DATAVD010001677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1088877"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            162..761
                     /locus_tag="VHX39_32220"
     CDS             162..761
                     /locus_tag="VHX39_32220"
                     /inference="COORDINATES: protein motif:HMM:NF021438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2147 domain-containing protein"
                     /protein_id="HEX3995859.1"
                     /translation="MLDAYESHAPARGFPDFLATYLETGSPLSRIREVRSFIFLIAVL
                     GLISFSPKAYAQKAPPADMAWTQGAHNPTGLWVTANGNAVVQIAPCGQDLCGRIVGLV
                     LGPNDPMPTDWTGAPQCGLTIFRTVPRIDANGQVTAWSGAILDPRNGSQYGARIKLNQ
                     PDQLELRGYLGLPIFGRTQTWSPYRGSVPANCRLQRASS"
     gene            complement(976..1641)
                     /locus_tag="VHX39_32225"
     CDS             complement(976..1641)
                     /locus_tag="VHX39_32225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995860.1"
                     /translation="MLPAVWAPSPDYKEAKGVIANYVEALTKAAPPRVVALSSMGANR
                     TSGLGMITALSLLEQGFRDLTSPIAFVRAGGFFENFLYGLQVAQGGTLPVYYNPTNRK
                     STMVATNDIGAEVATLLTGPAWSGQRVVELGSMVSADEVAEQLGEVLNLDVKAFAVPR
                     AGWAEVFEQFGIPKGHTGPAEEMFEAVNAGWMDLGAEDTEHVAGTTSARDVFEAAQNA
                     AKA"
BASE COUNT          294 a          523 c          494 g          373 t
ORIGIN      
        1 gacgtgcacg ccaaaagcgt cgaccccgtg catgatttcg atacctgcgc tggttacatg
       61 gccatcgcct ttgttgtctc gctggtgatt tacgtcggcg tgttggtcct gatcccgtag
      121 gaccaaggat ttttggctgg agctgatagg cgcaattttc aatgctcgat gcgtatgaaa
      181 gccatgctcc cgcaaggggt tttcctgatt tccttgcaac gtatttagag accggaagcc
      241 ctctttcgag aattcgtgaa gtgcgttctt ttatcttttt gattgcagtc ctcggtctga
      301 tttccttttc gccgaaggcc tatgctcaaa aggccccgcc cgccgacatg gcttggacgc
      361 agggcgcaca taatccgacc ggcctttggg tgacggccaa cgggaacgcc gtggttcaga
      421 tcgccccctg cggacaggac ctgtgcggcc ggatcgttgg cctggtgctg gggccgaacg
      481 atccaatgcc gacggattgg acgggtgcgc cacaatgcgg gctaacgatc ttccgtacgg
      541 tgccgaggat cgatgccaac ggtcaggtga cggcttggtc cggcgccatt ctggatccgc
      601 ggaatggctc gcagtacggc gcgcgaatta agctgaatca gccggaccag ttggaattac
      661 gcggctatct tggcctgccg attttcggca ggacacaaac ttggtcgcca taccgtggtt
      721 cggtgccggc gaactgcagg ttgcagcgtg cttccagcta gcggaccggc cgcgcgcggg
      781 agctttgacc cctccatgag gcatctgtcc ttgccggcgt ccatatgcca caccatcagg
      841 atgctctccc gcgaactagc tgcgttcgat cgcgatcgct gccgcatcga acgcctgggc
      901 gatggcctcg gtctgggtcc gggtaagtgg gccgccgccg tgggtggcgc gtctcatgcc
      961 agatccgtcc cggacttacg ccttggcggc gttctgtgca gcctcgaata catcgcgtgc
     1021 ggacgtcgta cccgctacgt gctccgtatc ctcggctccg aggtccatcc atcccgcgtt
     1081 cacggcctca aacatttctt cggcaggtcc ggtgtggccc ttcgggatgc cgaactgctc
     1141 gaacacttcc gcccaccctg cacgcgggac tgcaaaggct ttcacgtcga gattcaagac
     1201 ttcacccaat tgctccgcga cttcatccgc gctgaccatc gaaccaagct cgacgacgcg
     1261 ctgccctgac cacgctggcc cggtcaatag ggttgcgacc tccgcgccga tgtcgttcgt
     1321 cgcgaccatg gtcgattttc ggtttgtcgg attgtagtag accggcagtg ttccgccctg
     1381 ggcgacctgt aagccgtaga ggaagttttc gaagaatcca cctgcgcgca caaatgcgat
     1441 tggcgatgtc aggtcgcgaa aaccttgctc cagaagcgac aaggccgtga tcatcccgag
     1501 cccgctggtt ctgttcgccc ccatcgacga aagcgcaacc actcgcggcg gcgctgcctt
     1561 ggtgagcgcc tcgacatagt tcgcaatcac gcccttggct tctttgtaat cgggcgaggg
     1621 ggcccagaca gccggcaaca tgacaaatgc gccttcgacg cctttgagcc ccctctcgat
     1681 ggct
//
LOCUS       DATAVD010001678         2477 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1275859, whole genome shotgun sequence.
ACCESSION   DATAVD010001678 DATAVD010000000
VERSION     DATAVD010001678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1275859"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..883)
                     /locus_tag="VHX39_32230"
     CDS             complement(110..883)
                     /locus_tag="VHX39_32230"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX3995861.1"
                     /translation="MAYDHILLDREDGVGIVTLNRPESLNAMNRKLGAELADAMAQLN
                     SDDAIGCIVVTGSGEKAFSAGGDIKEQLADDKRYSQEELDHMSNPRRSYDVAASPKPT
                     IGMMNGLAYGGAAVLASSLDMRIGCEGTRFRFLAAAYGRINSTWSLGCQIGWPMAKEL
                     LFSARIVEAEEAYRIGLLNHLVPRAQLRATTMQLAKQIAGNHRGAVMGVKALLLQQKG
                     ESQEAQWAAEYEYTTKVMRGAKAKDAFPEFLARKGISAA"
     gene            991..1998
                     /locus_tag="VHX39_32235"
     CDS             991..1998
                     /locus_tag="VHX39_32235"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3995862.1"
                     /translation="MPNWNTRQVGRTALRVTEIGVGTATMGGKRFTVEHATGEAIVRA
                     AWDAGIRYVDTAPFYGVGAAEHRVGDALRGEDRNTWVLSTKVGRLLKPHRGSGQHEDQ
                     GLSPFHFDVVYDYSYDGIMRSVEDSYQRLGLAKLDILFVHDIGVYQHGAEANAHHSKI
                     LRDSGYKALEELKRTGVCSAFGLGVNEKEIILDVMQWGDWDVFLLAGRYTLLEQGPLD
                     DLLPLCEKRGASIVVGGPLNSGILAGRDTWNYAPAPADIVDRVKRIQAVCDAHHVPLA
                     AAAFQFPLAHPAVCAIIPGPRNAAEFNENVPLFTFPIPGALWGDLKTAGLVRQDAPTP
                     K"
     gene            2016..>2477
                     /locus_tag="VHX39_32240"
     CDS             2016..>2477
                     /locus_tag="VHX39_32240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3995863.1"
                     /translation="MMMPTRRRLVQMTAGGIGAAAFAARAQAQLPTASPPSVVTVPPR
                     EWGPHAPPAIYPDPDVVVLDPVFAQYRVGNAGIHRVATGFQWAEGPAWSSQGHYLVFS
                     DVTGDTQYRFNWDDQRVTAFRKPSWNSNGNTFDLQGRQITAQDYYRRVVRWE"
BASE COUNT          459 a          750 c          785 g          483 t
ORIGIN      
        1 cttgtccagg ccaacgggag ctccaattcg ttgggtcaga tggcccggcc aagccgggcc
       61 atgacgttga aagggagtgt caagcggtca accgttaaga cggtcggaat tacgccgccg
      121 aaatcccctt gcgcgcgagg aattccggga acgcatcttt ggccttggcg ccacgcataa
      181 ccttcgtggt gtattcatat tctgccgccc actgggcttc ctggctctcg cccttttgtt
      241 gcagcagcag ggccttcaca cccatgaccg caccgcgatg attgccggca atctgcttcg
      301 ccagttgcat cgtcgtcgcc cgcaattgcg cccgcggaac gaggtgattg agcaggccga
      361 tgcgatacgc ttcctcggcc tccacgatgc gcgccgagaa cagcaattcc ttggccatcg
      421 gccagccgat ctgacagccc aatgaccagg tggagttgat gcggccgtag gcggcggcga
      481 ggaaacggaa gcgggtgccc tcgcagccga tccgcatgtc gagcgaggat gccagcactg
      541 ccgcaccgcc ataagcgaga ccgttcatca tcccgatcgt cggcttggga gacgcagcga
      601 catcatagct gcgccgcgga ttgctcatgt gatcgagttc ttcctgggag taacgtttgt
      661 cgtccgccaa ctgctccttg atgtcgccac cggcagagaa cgctttctcg ccggaaccgg
      721 tgaccacgat gcagccgatc gcatcgtcac tgttgagctg cgccatcgca tcggcgagtt
      781 cggcgccaag cttgcggttc atcgcgttca ggctttccgg acggttgagg gtgacgatcc
      841 cgacgccgtc ctcgcgatcg agcaatatgt ggtcgtatgc catggcttcc tccctggtgg
      901 cggtgcatcc cctggcggca gccaggccga gccgataatc tgccctgaac cacagatttg
      961 gggaaacacc aactcccgag gagcagcgtc atgccaaact ggaacacgcg tcaggtcggc
     1021 cgcaccgcat tgcgcgtgac cgagatcggc gtcggtaccg caacgatggg cggcaagcgt
     1081 ttcaccgtcg aacacgccac cggcgaggcc atcgttcgcg ccgcctggga tgctggcatt
     1141 cgttatgtcg ataccgcacc gttttacggc gttggtgcgg ccgagcaccg ggtcggcgat
     1201 gcgctgcgcg gcgaagaccg caacacctgg gtgctgtcca ccaaagtcgg ccgcctgctg
     1261 aagccgcatc gcggctctgg gcagcacgag gatcagggcc tgtcaccgtt tcattttgat
     1321 gttgtttacg attattccta tgacggtatc atgcgctcgg tcgaggacag ttatcagcgg
     1381 ctcggccttg cgaaactcga cattttgttt gtgcacgata tcggcgtgta tcagcacggc
     1441 gctgaggcca acgcgcatca cagcaagatc ctgcgcgaca gcggctataa agcgctcgag
     1501 gaactgaagc gtaccggggt ttgcagtgcc ttcggtctgg gcgtgaacga gaaagagatc
     1561 atcctcgacg tgatgcaatg gggtgactgg gacgtgttcc tgctcgccgg gcgctatacg
     1621 ttgctggaac aagggccgtt ggatgatttg ttgccgttgt gtgaaaagcg cggtgcctcg
     1681 atcgtggttg gcgggccgtt gaactccggc atattggccg gccgcgacac ctggaattac
     1741 gcacctgcgc cggcagacat cgtcgaccgg gtgaaacgga tccaggcggt ctgcgatgcg
     1801 caccatgtgc cgttggcagc ggcggcgttc cagttcccgc tggcgcatcc ggcggtttgc
     1861 gcgatcattc cgggtccgcg caatgcggcc gagttcaacg aaaacgtgcc gctgtttacg
     1921 ttccccatcc ccggtgcact atggggcgac ctgaaaaccg ccggcctggt ccggcaggac
     1981 gcgccgacgc caaaataaaa cgggaggaaa caaatatgat gatgccaacg cgccgccggc
     2041 tcgtacaaat gaccgcgggc gggatcggtg ccgccgcgtt cgccgcgcgt gcgcaggcac
     2101 aattgccgac cgcatcgccg ccgagtgtgg tgaccgtgcc gccgcgcgaa tggggtccgc
     2161 acgcgccgcc ggcgatttat cccgatccgg atgttgtggt gctggatccc gtctttgcgc
     2221 agtaccgtgt cggcaatgcc ggcatccacc gcgttgcgac cgggttccaa tgggccgagg
     2281 gacccgcgtg gtcgagccag ggccactatc tggtgttcag cgatgtgacc ggcgatacgc
     2341 aatatcgttt caactgggac gatcagaggg tgaccgcatt tcgaaaacca tcctggaaca
     2401 gcaacggcaa tacgttcgat ttgcaggggc ggcagatcac ggcgcaagat tattaccgcc
     2461 gggtggtgcg ttgggaa
//
LOCUS       DATAVD010001679         4126 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1458623, whole genome shotgun sequence.
ACCESSION   DATAVD010001679 DATAVD010000000
VERSION     DATAVD010001679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4126
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1458623"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..1021
                     /locus_tag="VHX39_32245"
     CDS             194..1021
                     /locus_tag="VHX39_32245"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX3995864.1"
                     /translation="MMRLTEDQVRQYSDTGYLAPIRVLTTAETAQIRAKLEAFEAGSG
                     PLAGKLRQKSHLLFTWLNDLIRHERILDAVEDIIGPDILCWGTSFFIKEPHNPAYVSW
                     HQDSTYWGLEPADIITAWIALSDSTTENGAMRVVPGSHTMAQVPHRDTFRSDNLLSRG
                     QEVMVDVDASQADTLTLAAGEMSLHHVRLIHGSEPNPSDQRRIGFAIRYLPTYVRQVA
                     GAHDWATLVRGVDHYGNFELEQRPDADMSESAQAYHAAVVGGHAQILMRDTGRQMRA"
     gene            complement(1173..2621)
                     /gene="boxB"
                     /locus_tag="VHX39_32250"
     CDS             complement(1173..2621)
                     /gene="boxB"
                     /locus_tag="VHX39_32250"
                     /EC_number="1.14.13.208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008620983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA];
                     GO_process: GO:0010128 - benzoate catabolic process via
                     CoA ligation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoyl-CoA 2,3-epoxidase subunit BoxB"
                     /protein_id="HEX3995865.1"
                     /translation="MPDGIAIDYDGLIPNNVGLADDLRVRKALETWYPGYIDWWKTMG
                     PEGFQNSPVFLRTAVGVGSDNWAKFDFVRMPEYRWGILLAPQVENRTIPFGAHKGEPA
                     WQEVPGEYRAMLRRLLVIQGDTEPASVEQQRHLGATAPSLYDLRNVFQVNVEEGRHLW
                     AMVYLLQKYFGRDGREEAEELLKRRSGDTDSPRMLGAFNERTPDWLSFFMFTFFTDRD
                     GKMQLAALAQSGFDPLSRTCRFMLTEEAHHMYVGETGVTRTIQRTCEAMQAAGITDPY
                     DIERIRALGVIDLPTIQKKANLHFSLTLDLFGNEISTNAANAFNAGLKGRYQEDKLTD
                     DHQLTNATYPVLRPRDGSILNEDVPALSALNMRLRDDYVADAAAGVNRWNRVFTQTGV
                     DFRITLPHVAFNRRIGEFAAVHADTEGRVMTRDTWDQRKATMLPSADDNTFIASLMRP
                     ERERGAFASWIAPPRHGIDNRPGDFEYVKIER"
     gene            complement(2639..>4126)
                     /gene="boxC"
                     /locus_tag="VHX39_32255"
     CDS             complement(2639..>4126)
                     /gene="boxC"
                     /locus_tag="VHX39_32255"
                     /EC_number="4.1.2.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011382621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_process: GO:0010128 - benzoate catabolic process via
                     CoA ligation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-epoxybenzoyl-CoA dihydrolase"
                     /protein_id="HEX3995866.1"
                     /translation="LKLNSYDLGVDIELADAVTRLRFEHPEVGAVVLRSGNAAVFCAG
                     ANIRMLAKASHGHKVNFCKFTNETRLAIEDACAHSGQHYLAAISGGAAGGGYELALTA
                     DHLMLIDDRRSAVSLPELPLLAVLPGTGGLTRLTDKRKVRRDRADVFCTTEEGVRGKR
                     AVEWRLVDEIVPPSVWEATVRERARAMADRGPAKGIVLNALQRELSSDQLNYRHVRVA
                     LDRHGRRATITLRGPETIAADLAGIHREGDTFWPLALARELDDALLHLRLNEPDLGLL
                     VFRSEGDPQRVLAADTLLTANAEDWLVREITLLLKRVFKRVDMTARSIITLIEPGSCF
                     AGSLCEVVFAADRSLMHADATLHLSPLNFGPLPMGNDLTRLATRFLGEPDSTGKAREY
                     VGQALDAATADSLGLVTTVHDDIDWDDEVRLLLEERASFSPDALTGLEANLRFAGPET
                     METRIFGRLTAWQNWIFQRPNAVGDAGSLKRYGTGERPTFDPQRV"
BASE COUNT          802 a         1277 c         1252 g          795 t
ORIGIN      
        1 ctccgatggt aatgccggcg cccccgccgc cgcctccggt tgtgcaccac aggtggaagc
       61 accggcatca ccacatgaaa catcgtaaga tgtagtaccg ggacgttaag tccgccttga
      121 cttcgaaccc ctgcggtttc caggtttcgc ctgcgcgcgg cgaaacctgg attaccgtgg
      181 ggagcggtct gttatgatgc gattaaccga agatcaggta cggcagtata gcgatactgg
      241 gtacctcgcg cccattcggg tgctaaccac cgccgaaacc gcccaaatcc gagcaaagct
      301 cgaggcattt gaggccggct ccggtcctct cgccggtaaa ctccggcaaa aatcccacct
      361 gcttttcacc tggctgaatg atctcatccg gcatgagcga atcctcgacg ccgtcgagga
      421 catcattgga ccggacattt tgtgctgggg cacgtccttc ttcatcaagg aaccccacaa
      481 tcctgcgtat gtatcctggc atcaggactc aacttattgg ggtcttgagc cagcggatat
      541 catcaccgcg tggattgctt tgtcggatag cacaaccgaa aacggagcca tgcgggtcgt
      601 tccaggctcg cataccatgg cgcaagtacc acatcgtgac acattccgtt cggacaacct
      661 gctcagccgt ggccaggagg tcatggtcga tgtggatgcc tcgcaggccg acacattgac
      721 gctggcagcc ggagaaatgt cactgcacca tgtccggctg atccacggat cggagccgaa
      781 tccgtcggat caacgccgca tcggcttcgc gatccgctat cttccaacct atgttcgcca
      841 ggtcgccggc gctcacgact gggccacctt ggtgcgcggc gtcgaccatt acggcaactt
      901 tgaactggaa cagcgccccg acgccgatat gtccgaatcg gcccaggcct atcatgcggc
      961 tgtggtcggc ggtcatgcgc agatcctgat gcgggatacc gggcgccaga tgcgggcgtg
     1021 agccgccgaa aacccggttt ctgcctgaca atcgatacct gccgaagccg gcgatggcga
     1081 cccgcttccc gagcgggtac gggctccagg gacgaccccg ggtatgacga tcctggagcc
     1141 cgtacggact gccgggcagc ccccggccgt cgctaccgtt cgatttttac atactcgaaa
     1201 tcgccgggac ggttgtcgat gccgtgccga ggtggggcaa tccaggacgc gaacgcgccc
     1261 cgttcacgct ccgggcgcat caggctggca atgaacgtgt tgtcatcggc ggacgggagc
     1321 atggttgcct tgcgttggtc ccaggtatcc cgggtcatca cgcgaccttc ggtgtcggca
     1381 tggaccgcgg cgaactcacc gatgcggcgg ttgaatgcca catgcggcag agtaatgcgg
     1441 aaatcgacgc cggtctgcgt gaaaacccgg ttccaacggt tcaccccggc ggcggcatcg
     1501 gccacatagt catcgcgcag ccgcatgttc agcgctgata aggcgggcac atcctcgttc
     1561 agaatagagc cgtcgcgcgg ccgtagcacg ggataggtcg cgttggtcag ttggtgatcg
     1621 tcggtcaatt tgtcttcctg atagcggccc ttcaatccag cattgaacgc attcgccgca
     1681 ttggtgctga tttcgttacc gaacagatcg agcgtcagag aaaaatgcag attggccttt
     1741 ttctgtatcg ttggcagatc gataacgcca agcgcgcgaa tacgttcgat gtcgtacgga
     1801 tcggtgatgc cggcggcctg catcgcctcg caggtgcgtt ggatggtccg cgtcacgccg
     1861 gtttcgccga cgtacatgtg atgcgcttcc tcggtcagca tgaatcggca ggtgcgggac
     1921 agcggatcga agccggactg cgccagcgcc gcgagttgca tcttgccgtc gcggtcggtg
     1981 aaaaacgtga acatgaagaa cgacagccag tccggcgtcc gttcattgaa cgcgcccagc
     2041 atgcgagggg aatcggtgtc gccggagcgg cgtttcagca gttcttcggc ttcctcgcga
     2101 ccgtcgcggc caaaatactt ttgcagcaag taaaccatgg cccagaggtg gcggccttcc
     2161 tcgacattca cctgaaacac gttgcgcaga tcgtaaagcg acggagcagt cgcgccgagg
     2221 tggcgttgct gttccacgct ggccggctcg gtatcgccct ggatgaccaa caggcggcgc
     2281 agcatcgccc ggtattcacc gggaacttcc tgccaggctg gctcgccttt atgggcgccg
     2341 aacgggatcg tccgattttc cacctgaggg gcgagcaata tcccccagcg atattccggc
     2401 attcgaacga aatcgaactt ggcccagttg tcgctgccga caccgacggc agtgcggagg
     2461 aagaccggag agttctggaa accctcgggt cccatcgtct tccaccagtc gatgtagccg
     2521 ggataccagg tctccagcgc cttgcggacg cgcaggtcat cggcgagccc gacattgttg
     2581 gggatcagcc cgtcataatc gatcgcgata ccgtcaggca tggtaaaacc ccctttggtc
     2641 agaccctttg cgggtcgaat gttggccgtt cgccggtgcc gtagcgtttc agcgacccgg
     2701 cgtcgccgac cgcgttgggc cgctggaaga tccagttctg ccatgcggtc agccggccga
     2761 agatacgcgt ttccatggtc tcgggaccag caaaacgcaa attggcttcc agcccggtca
     2821 acgcatcggg ggagaacgac gcgcgttctt ccagcaggag ccgtacctcg tcgtcccagt
     2881 cgatgtcgtc gtggacggtt gtgacaagac ccagggaatc ggccgtggct gcatcgagcg
     2941 cctgaccgac atactcgcgc gctttgcctg tgctgtcggg ctcgccgaga aaccgtgtgg
     3001 cgagccgggt cagatcgttg cccatcggca gcggtccaaa gttcagaggc gacaggtgta
     3061 atgttgcgtc agcgtgcata agcgagcgat cggcggcaaa cacgacttcg caaaggctgc
     3121 cggcaaagca cgaccccggt tcgatcaacg taatgatgct gcgcgccgtc atgtccaccc
     3181 gtttgaacac ccgcttcagt agcaaggtga tctcgcggac cagccagtcc tcggcgttcg
     3241 cagtcagtaa tgtgtcggcc gcgaggaccc gttgcgggtc gccttcgctg cggaacacca
     3301 gcagaccgag atcgggctcg ttcagccgca ggtgcaaaag cgcatcatcc agttcacggg
     3361 ccaaagccag cggccagaac gtatcgcctt cgcgatgaat accagcgaga tcagcggcaa
     3421 tggtttccgg gccgcgtaac gtgattgtgg ctcgccttcc gtgccggtcg agtgccacgc
     3481 ggacatgccg atagttcagc tggtcggagg atagttcgcg ctgcagggcg ttcaggacaa
     3541 tacccttcgc aggtccccga tccgccatgg cgcgggcgcg ttcccggacc gttgcttccc
     3601 acacagaggg cggaacaatt tcatcgacca accgccattc caccgcacgt ttgccacgca
     3661 cgccttcttc ggtcgtgcag aacacgtcag cacggtctcg ccgcactttg cgtttgtcag
     3721 tcaaccgggt caggccaccg gtgccaggca gcactgccag cagcggtagt tccggcaacg
     3781 acaccgctga gcggcggtca tcgatcagca tcaggtgatc cgcggtcagc gccagttcgt
     3841 agccgccgcc cgcggcacca ccgctgatcg cggcgaggta atgctgaccg gaatgggcac
     3901 aggcgtcctc gatcgccagc cgcgtttcgt tggtgaattt gcaaaagttc accttgtgac
     3961 cgtgactggc cttggcgagc atgcgaatat tggcacccgc gcaaaacacc gccgcgttgc
     4021 cggatcgcag aacaaccgcg ccaacttcgg gatgctcgaa gcgcaaccgc gtgaccgcat
     4081 cggccagttc aatatcgacg ccgagatcgt aggagttcag tttgag
//
LOCUS       DATAVD010001680         2600 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1458791, whole genome shotgun sequence.
ACCESSION   DATAVD010001680 DATAVD010000000
VERSION     DATAVD010001680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2600
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1458791"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..331
                     /locus_tag="VHX39_32260"
     CDS             <1..331
                     /locus_tag="VHX39_32260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995867.1"
                     /translation="IVDSTLFHSMPVELRDGYQRSIVRAAKPGASYFVLVFAKTGSDG
                     PANPVTEDELRDVVSKYWVIDEVRPARIHGNFGSIDHPGFPTKELRDEDNGRKSLPAW
                     LLSAHLG"
     gene            514..1038
                     /locus_tag="VHX39_32265"
     CDS             514..1038
                     /locus_tag="VHX39_32265"
                     /inference="COORDINATES: protein motif:HMM:NF018765.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1360 domain-containing protein"
                     /protein_id="HEX3995868.1"
                     /translation="MGEVSQIAQRAREEADVYRADNPRPLSGYLAALGVYGSVVTLAT
                     VIAAATDRRLPARWSVQDLVTVTLGTQKLSRIVSKSSVTSPLRAPFAQYRGTGGPSEV
                     QEETRNSSQLRHSLGELLTCPFCLDVWVGTAFVIGLIFAPRLTRLIAGSFASLAGADF
                     LQLAYAMAQQAAEH"
     gene            1065..1478
                     /locus_tag="VHX39_32270"
     CDS             1065..1478
                     /locus_tag="VHX39_32270"
                     /inference="COORDINATES: protein motif:HMM:NF017917.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaB family protein"
                     /protein_id="HEX3995869.1"
                     /translation="MPKTTKGGQPRQSELPSTLQRSSGKAKRTFAKTHDSAADEYGSD
                     ERAHRVAYAALKHSFEKVGDHWEAKKSRGPSDKLAEGGGPRNTGPSAEGVDANASKKH
                     LLDIARRLDVRGRSRMAKSELVEAIKKHNRRVRGK"
     gene            1687..2547
                     /locus_tag="VHX39_32275"
     CDS             1687..2547
                     /locus_tag="VHX39_32275"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEX3995870.1"
                     /translation="MADRREDKAGGLSGWVAERAADWDLSGPDEATLQRSKFFWNALV
                     DYWFRMEIDGWENIGEPPALLVGIHSGAPFVWDAWTVGVQWWRRFGPERPLHGTAHDA
                     LMAIPGIGRYFRCMGVLPAAPDAIATALAEGHDVALWPGGEVDSLRPWRERDQANLAG
                     RKGFVKMAIRAGVPIVPIATVGGADAMPVLIRGDKLSQFLRLDKILRLKVFPLAISLP
                     WGIAPAALPQFPLPAKIRTRFMPAVEIDNDADRADNDEYVDRKYQEVQDSIQRGMNAL
                     ARERALPVFG"
BASE COUNT          495 a          790 c          870 g          445 t
ORIGIN      
        1 catcgtggac agcacgctgt tccactcgat gcccgtcgag ctgcgcgacg gctaccagcg
       61 ctcgatcgtg cgggccgcca aaccgggcgc gtcctacttc gtactggtgt tcgccaagac
      121 cggaagtgac ggtccggcaa acccggtcac cgaggacgag ctgcgtgacg tcgtctccaa
      181 atattgggtc atcgacgagg ttcgcccggc caggattcac ggcaacttcg gcagcatcga
      241 tcacccggga tttcccacca aagagctccg cgacgaggac aacggacgca agtccctgcc
      301 ggcctggctg ctgtcggcgc acctgggctg accggcgaaa gccttcaccc gctcaagggt
      361 ccgtcactag ggcgtttcgc caccgctgtc gatctctccc tcggcagcgg tggcgttacg
      421 tcttgcggga cagtccacta accccgcgct caccggattg gccggcatcg acggcgggta
      481 atcgtcgtgc ggggaaggcc ggagggagca acagtgggcg aagtgagtca gattgcgcag
      541 cgtgcgcgcg aagaagccga tgtgtatcgc gccgacaacc cacgaccgtt gagcggttac
      601 ctcgccgccc tcggtgtgta cggcagcgtc gtaacgctgg cgacggtcat cgcggcggcg
      661 acagatcgcc gtttgcctgc gcgatggtcg gttcaggact tggtgaccgt gacgctgggc
      721 actcagaagc tatcccggat agtgagcaag tcctcggtga ccagcccact gagggcgccg
      781 ttcgcccagt accgcggaac cggtggtccg tcggaagtac aagaggaaac ccggaattcc
      841 agtcagctca ggcacagctt gggggagttg ctgacctgtc cattctgtct ggacgtgtgg
      901 gttggcaccg cattcgtcat cgggctgata ttcgcgccca ggctgactcg tctgatcgcg
      961 ggcagtttcg cgtcgttggc gggcgctgac ttcctgcaac tcgcctacgc catggcacag
     1021 caggcagccg aacattagcg acaccagaat ccaggaggac agccatgccg aaaacaacca
     1081 agggcggtca gcccaggcag agcgagttgc ccagcacgct gcaacggtcc agcggcaaag
     1141 cgaagcgaac attcgccaaa acgcatgatt cggccgctga cgagtacggc agtgatgagc
     1201 gtgcccatcg ggttgcctac gcggcgctca agcacagttt cgagaaagtt ggcgaccact
     1261 gggaggccaa aaaatccagg ggtccctctg acaagctcgc cgagggcggc ggtccccgca
     1321 acaccggtcc ctccgcggaa ggagtcgacg cgaacgccag caagaaacac ctcttggaca
     1381 ttgcccgtcg gctggacgtc cgcggacggt ccaggatggc gaagtcggaa ttggtcgagg
     1441 caatcaaaaa gcacaaccgc cgggtccgcg gcaagtgatt tttgacgacg gcgtacagga
     1501 cgttctgccc tggagctgac tgtctgatcg ggctgatgtc cggccgtccg gcccgattgg
     1561 tctcgccggt ggattgcgcg gcgctcgatc gggtatgaca cccgtatgag tatgagtgat
     1621 agcgatcaca gatctgcaga ggtgcgcgag caggcgcaac aacaggccga ccaggcacgc
     1681 agggccatgg cggaccgacg cgaggataag gccggcgggc tgagtggctg ggtggcagag
     1741 cgcgctgccg attgggatct cagcgggccg gatgaggcaa ccctgcaacg gtcgaagttc
     1801 ttctggaatg ccctggtcga ctactggttc cggatggaga tcgacggttg ggaaaatatc
     1861 ggagagccgc ccgcactgtt ggttggaatc cactccggcg cgccgttcgt ctgggacgcc
     1921 tggacggttg gcgtgcagtg gtggcgccgg ttcggtccgg agcgaccgct gcacggcacc
     1981 gcccacgacg cgttgatggc cattccaggt atcggccggt acttccgctg catgggagtg
     2041 ttgccggcgg cacccgacgc catcgcaacg gcgctggccg aaggacatga cgtggcgctg
     2101 tggcccggcg gcgaagtgga ctcgttgcgc ccctggcgcg aacgcgacca ggccaacctg
     2161 gctggccgaa aaggttttgt gaagatggcg atccgcgccg gcgtgccgat cgtgccgatc
     2221 gcgacggtcg ggggcgccga cgcgatgccg gtgttgatcc gcggcgacaa attgtcgcag
     2281 ttcttgcgtc tcgataagat cctgcggctg aaagtctttc cacttgccat ttcgctgccg
     2341 tgggggatcg cccctgccgc actcccacaa ttcccgctgc cggccaagat caggacgcgt
     2401 ttcatgccgg cggtggaaat cgacaacgat gcggatcgcg ccgacaacga cgagtatgtc
     2461 gaccgcaagt accaagaagt tcaggacagc attcagcgag gaatgaacgc gttggctcgc
     2521 gaacgggctc tgccggtatt cgggtgaacg gctgctgact cagaagtaac gggccccggt
     2581 tcgatgtgaa ccggggcccg
//
LOCUS       DATAVD010001681         4554 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_163210, whole genome shotgun sequence.
ACCESSION   DATAVD010001681 DATAVD010000000
VERSION     DATAVD010001681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4554
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163210"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..1590)
                     /locus_tag="VHX39_32280"
     CDS             complement(106..1590)
                     /locus_tag="VHX39_32280"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004368 - glycerol-3-phosphate
                     dehydrogenase (quinone) activity [Evidence IEA];
                     GO_process: GO:0006072 - glycerol-3-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HEX3995871.1"
                     /translation="MGRTGVFDIAIIGGGINGVGIARDAAGRGLSVLLVEQGDLANGT
                     SSASTKLIHGGLRYLEFYQFRLVRESLAEREVLLRAAPHIIRPLRFVLPFRSGGRSWW
                     MLRAGLFVYDHLGGRRLLPATRVLNLSTDPAGEPLQSDLRRGFEYSDCWADDARLVVL
                     TARDAADRGATIRPRTRCNNARADDGLWALTLSDGVTEHARILVNASGPSVSRVLSDV
                     VGQDAPTRIRMVKGSHIVVRRLFQHDRSYLLQNPDGRICFAIPWQDDFTLIGTTDEDF
                     AGDPADVAISPAEVDYLCHAVSSWFRRPVAPADVVWSYAGVRPLRDDGASAAQEATRD
                     YVLELTGTPPVLSVFGGKITTFRRLAEAAMHRLAPLFPGLKPSWTADAHLPGGDFPWD
                     GFSALRDDLARTYPFLPVSTATRLARAYGTRAAALLGDAKSPADLGVTFGADLSEREV
                     DWLAQTEWASTAEDILWRRSKLGLRFTPAEVTALERFLARTASS"
     gene            complement(1615..2337)
                     /locus_tag="VHX39_32285"
     CDS             complement(1615..2337)
                     /locus_tag="VHX39_32285"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX3995872.1"
                     /translation="MIVSDVMTRKVLSVSPDETVEHAANLMLRHGISGLFVVDASGTL
                     VGVVTEGDLLRRDELGTERHRPWWLRVLVSPGKQALDFTRAHGRKVSDIMTPEVICVA
                     TDTPLEDVVETMEKQRIKRVAVTEEGHMVGVVARSDLLRALLTHEREKQPPQAQDDDR
                     TIRTNILAALESASWAPLTTLNVTVAKGVVDIWGTITNPDERRAICVIAENVPGVQTV
                     HDHLVFVEPYTGTIIESPDDTR"
     gene            complement(2349..3755)
                     /locus_tag="VHX39_32290"
     CDS             complement(2349..3755)
                     /locus_tag="VHX39_32290"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HEX3995873.1"
                     /translation="MPVPSLETVNAVLQHVDAQLDRSQETLFDLLRIPSISAQEAHRD
                     DCARAAAWVRDRLVALGFRTEIRPTPGHPVVLGHFDGPADYKGPHVLVYGHYDVQPPD
                     PLELWNSPPFEPQLVDGPRGKRFVARGAVDDKGQTTMFLEALRAWHEVGGGIPAKLTV
                     LIEGEEEVGSRNLEPFLRENKAELKSDIALISDTNMWDVDTPALTTSLRGLTYVQVTV
                     KAAKRDLHSGLYGGSALNPINAITHILGDLQDANGRIQLPGFYDKVKPISNARRAQWD
                     SLGFSESAFLGDIGLSVPVGERGYSALERLWARPTADINGIWGGYTGQGAKTVIAAEA
                     SAKVTFRLVPGQDPDEVFEQFKQFVTERLPEGATAEFDGGHGSPGVDVNADSPWVHAA
                     QTALAEEYGKPAMLIGCGGSIPVVVSLKNVLGIDTLLMGFGLDDDQIHSPNEKFEQRC
                     FHHGIRSHVRLLAKFAAG"
     gene            4016..>4554
                     /locus_tag="VHX39_32295"
     CDS             4016..>4554
                     /locus_tag="VHX39_32295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase family
                     protein"
                     /protein_id="HEX3995874.1"
                     /translation="MDMVVDRSAITLESRFADRDRPVLLTGIQALLRLLLEQQRLDHA
                     SGLHTAGFVSGYRGSPLGGLDRELWAQKKLMAAHDIRFEPGVNEDLAATMILGTQELD
                     AFPGKKFDGVFGLWYGKGPGVDRSGDAFHCANMAGTHEHGGVLAVSGDDHGAHSSTYP
                     HQTEYVFQNVFMPVLNPASV"
BASE COUNT          867 a         1467 c         1389 g          831 t
ORIGIN      
        1 ctctcgacac cttcaacccg gccgcgaaag cgttctattt gcggcagggc tatgaggtct
       61 ttggaaccct ggcggactac ccgccgggct acagcaagtt ctttctcagg aagatgctgt
      121 tcgggccagg aagcgttcca gcgcagtaac ttctgccggc gtgaagcgca gtcccagctt
      181 gctccggcgc cacaatatgt cctccgccgt gctggcccac tcggtctgtg ccagccaatc
      241 gacctcccgt tcgctcaaat cggcaccgaa cgttacaccg agatcggcag gcgattttgc
      301 atcgccaaga agtgctgcgg cacgggtgcc ataagcccgg gccagcctgg tcgcggttga
      361 caccggtaag aacgggtaag tccgggccag gtcatcgcgc aacgcggaga acccgtccca
      421 cgggaaatcg ccgccaggca aatgcgcgtc cgcggtccaa ctgggcttca ggccgggaaa
      481 caatggagcc aggcgatgca tcgctgcttc cgccagccgg cggaacgttg tgatcttgcc
      541 gccgaacaca ctcagcaccg gcggtgtgcc ggtcaattcg agcacgtaat cacgtgtggc
      601 ctcttgtgcc gcgctggcac catcatcgcg cagcggtctg accccggcgt agctccacac
      661 gacgtccgcc ggcgcgacgg gacggcgaaa ccaactgctg acggcatggc acaaatagtc
      721 gacttctgca ggtgagattg cgacatcagc cggatcgccg gcgaaatctt cgtccgtggt
      781 gccgatcaga gtgaaatcgt cctgccaggg aatggcgaag caaatgcgcc catcggggtt
      841 ttgcagcagg tagctgcgat catgctgaaa cagccgccgc acaacgatgt ggctgccctt
      901 caccatgcgg atccgggtcg gcgcatcctg tcccaccaca tccgacagaa cgcgtgacac
      961 ggatggccca gaggcattca ccaggatgcg ggcgtgctcg gtgacaccgt ccgacagagt
     1021 caaggcccag agtccatcgt ctgcacgcgc gttgttgcac cttgtgcgcg ggcggatcgt
     1081 ggcgcctcgg tcggcggcgt cgcgggccgt cagcaccacg aggcgggcgt cgtccgccca
     1141 acagtcggaa tattcaaagc cgcggcgaag atcgctttgg agcggttcgc ccgccggatc
     1201 ggtgcttaag ttcagcaccc gcgtcgctgg cagcaggcgc cgtccgccga ggtggtcgta
     1261 aacgaacaga cccgcccgca gcatccacca agagcggcct ccggaacgga acggcaatac
     1321 gaaacgcagc ggccgaatga tgtggggtgc tgcgcgcaac agcacttcgc gctcggccaa
     1381 cgattcgcgg accaaacgaa actggtaaaa ttccagatag cgcaatccac cgtggatcag
     1441 tttggtggag gccgacgagg ttccattggc cagatcgcct tgctcgacca gcaacaccga
     1501 gaggccacgg ccggcggcgt cacgcgcaat gccgacgccg ttgataccgc cgccaatgat
     1561 tgcaatgtcg aagacgcctg tgcgccccat tggcgacgct aagcccggtt caccttaccg
     1621 cgtatcgtcg ggcgactcga ttatggttcc ggtatagggt tcgacgaaca ccaggtgatc
     1681 atgcaccgtt tgcacacctg gaacgttctc ggcgatcaca caaatcgcgc gccgttcgtc
     1741 cgggttggtg atcgtgcccc agatatcgac cacgcctttc gccacggtca cgttcagcgt
     1801 ggtcagcggc gcccaggatg cggattccaa ggcggcgagg atgttggtgc ggatggtgcg
     1861 atcgtcatcc tgggcttgcg gcggctgttt ctcccgctcg tgcgtcagca atgcgcgcag
     1921 caggtcggag cgggcgacaa cgccgaccat atggccttcc tcggtgaccg cgacgcgttt
     1981 gatgcgttgc ttttccatcg tctcgaccac gtcttccaac ggtgtgtcgg tggcgacgca
     2041 aatcacctcc ggcgtcatga tgtcgctgac tttgcggcca tgtgcgcggg tgaaatccaa
     2101 tgcctgcttg cccggcgaga ccagcacgcg caaccaccac gggcggtgcc gctcggtgcc
     2161 gagttcgtca cggcgcaaca aatcgccttc ggtcacgacg ccgaccagcg taccggaggc
     2221 gtcgaccacg aacagacccg aaatgccgtg ccgcagcatc aaattcgctg cgtgctccac
     2281 cgtctcatcg gggctgaccg acaggacttt gcgggtcatt acatcggaaa ctatcatatc
     2341 ttcccctatc agcccgccgc gaatttcgcg agcaggcgca catgcgaacg aattccgtga
     2401 tggaaacaac gctgttcgaa tttttcgttc ggactgtgga tctggtcgtc gtccagccca
     2461 aaccccatca gcagcgtgtc gatccccagg acgtttttca gtgagacgac gaccggaatg
     2521 gatccgccgc agccgatcag catggcgggc ttgccgtatt cctcggccaa agcggtctgc
     2581 gccgcatgca cccagggtga gtctgcgttg acgtcgaccc ccggcgagcc gtgaccgcca
     2641 tcgaattccg ccgtggcgcc ttccggcaac cgttcggtga cgaattgttt gaactgctcg
     2701 aacacctcgt ccgggtcctg gccgggtacg aggcggaacg taacctttgc cgaggcctcg
     2761 gcggcgatca cggtcttcgc tccttgcccg gtatagccgc cccagatgcc gttgatatcc
     2821 gcggtcggcc gcgcccagag ccgttccaac gctgaatagc cgcgttcacc gaccggcacc
     2881 gacaggccga tgtcgccaag aaatgccgat tcggaaaagc cgagtgaatc ccattgcgca
     2941 cggcgcgcat tgctgattgg tttgaccttg tcataaaatc ccggcagctg aatgcgcccg
     3001 ttggcgtctt gcaaatcgcc caatatatgg gtgatcgcat tgatcgggtt gagcgccgat
     3061 ccgccgtaaa gccccgagtg cagatcgcgc ttcgccgctt tcaccgtgac ttgcacatag
     3121 gtcagcccgc gcaggctggt ggtcagcgcc ggcgtgtcga cgtcccacat attggtgtcg
     3181 ctgatcagcg cgatatccga cttaagttcg gctttgtttt ctctcaggaa tggctccagg
     3241 ttgcgcgagc cgacctcttc ttcgccctcg atcaacaccg tgagcttcgc cgggatgccg
     3301 ccgccgactt catgccaggc acgcaacgcc tcgaggaaca tggtggtctg gcctttgtcg
     3361 tccaccgcgc cgcgggcgac gaagcgcttg ccgcgcggac catccaccag ttgcggctcg
     3421 aacggcgggc tgttccacag ttccagaggg tcaggcggct gcacgtcgta gtggccgtag
     3481 acgagaacat gcggcccctt gtaatccgcc ggcccgtcga aatgcccgag cacgacggga
     3541 tgcccaggcg tcggccggat ctcggtccga aagcccagtg ccaccagacg atcgcgtacc
     3601 caggccgccg cccgcgcgca atcatcccgg tgcgcttcct gggcgctgat cgaggggata
     3661 cgcagcagat cgaacaacgt ctcctgtgac cgatccagct gcgcgtccac atgttgcagc
     3721 acagcattga cagtctcgag cgagggaacg ggcatgtcga aaactccggt cgtgatagtc
     3781 tggctccctt acaatggcgg agaggcgtcc gccacaccac atggccggga aaccggacgg
     3841 ccgcattgat caagatcatg cgcgaaaacg gtcgttcggt tacgaaaatt gcgcgtaata
     3901 ttatttcgcg gtgccgggct tgcgaacttc gccccatgca aggccaaatg ggacggaacg
     3961 ctggaaaatt ggcgcaagaa gcgccacgct catagcaacc gcagggagta gccccatgga
     4021 catggtcgtc gaccgaagcg ccatcacact ggaatcgcgc tttgccgacc gcgaccgacc
     4081 ggtcctgctg accgggatcc aggcgctgct gcgcctgttg ttggaacaac agcgtctgga
     4141 tcacgcgtcc gggctgcaca cggcaggttt cgtttccggc taccggggct ccccgctcgg
     4201 cggcctggac cgcgagctgt gggcccagaa aaagctgatg gcggcgcacg acatccgttt
     4261 cgagcctggc gtcaacgagg acctcgccgc caccatgatc ctgggcaccc aggaactgga
     4321 cgccttccct ggcaagaagt tcgatggcgt atttggcctg tggtatggca agggacccgg
     4381 cgtcgatcgc tccggcgacg cgttccattg cgccaatatg gccggaaccc acgagcacgg
     4441 cggcgtgctg gcggtgtcgg gtgacgacca cggcgcgcac tcgtcaacct atccgcacca
     4501 gaccgaatac gtgttccaga acgtgttcat gccagtgttg aacccggcct cggt
//
LOCUS       DATAVD010001682         1755 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_163299, whole genome shotgun sequence.
ACCESSION   DATAVD010001682 DATAVD010000000
VERSION     DATAVD010001682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1755
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163299"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..637)
                     /locus_tag="VHX39_32300"
     CDS             complement(<1..637)
                     /locus_tag="VHX39_32300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3995875.1"
                     /translation="MPGFLELGLDTFGDVTAGADGNLLPHAQVIRDVIEEAVLADELG
                     IDFFGVGEHHRSDFAVSAPEVVLAAIAGLTRRIRLGTAVTVLSSDDPIRVFERFATLD
                     AASNGRAEVILGRGSFTESFPLFGYELSQYEVLFEDKLDLFAALRRQGAVTWQGRTRP
                     PLTDQLVFPPIEVGRLKTWIGVGGSPESVIRAARYDLPLMLAIIGGDPLRFR"
     gene            complement(666..1265)
                     /gene="wrbA"
                     /locus_tag="VHX39_32305"
     CDS             complement(666..1265)
                     /gene="wrbA"
                     /locus_tag="VHX39_32305"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010668048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003955 - NAD(P)H dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H:quinone oxidoreductase"
                     /protein_id="HEX3995876.1"
                     /translation="MAKVLVLYYSAYGHIEAMANAVAEGAREAGAEVDVKRVPELVPA
                     EVAKNSHFKLDQPAPVAVIADLENYDAIIVGTGTRFGRMSSQMANFLDQAGGLWAKGA
                     LNGKVGAAFTASATQHGGQETTLFSIITNLLHFGMVVVGLDYGFAPQMTVDEVVGGAP
                     YGATTITSSNGSRQPSQNELDGARYQGRRVAMVAAKLHG"
BASE COUNT          328 a          639 c          489 g          299 t
ORIGIN      
        1 gcctgaaccg cagcggatcg ccgccaataa tggccagcat cagcggcaga tcatatcggg
       61 ccgcccgtat caccgactcc gggctaccgc ccacgccgat ccaggtcttc aagcgtccca
      121 cctcgatcgg cggaaacaca agctgatcgg tcagcggcgg ccgggtcctg ccctgccatg
      181 tgaccgcgcc ctgacgccgc aacgccgcga acaggtccag cttgtcctcg aacaacacct
      241 cgtactgcga caattcgtag ccgaacaaag gaaacgactc ggtgaacgac ccgcgcccga
      301 ggatcacctc ggcccgcccg ttcgacgccg catccagcgt ggcgaaccgc tcgaacacac
      361 ggatcgggtc gtccgaactc agcaccgtca ccgccgtccc gaggcgaatc cgcctggtca
      421 gaccggcgat cgccgccaac acgacctccg gcgccgaaac ggcgaaatcg ctccggtgat
      481 gttcccccac cccgaagaag tcgatgccca gttcatcggc gagcaccgcc tcctcgatca
      541 cgtcgcggat cacctgcgca tgcggcaaca ggtttccatc cgcaccggcg gtgacatcgc
      601 caaacgtatc aagtccaagc tcgagaaacc ctggcattgg cgtcgtcacc accgtctttc
      661 agggcctagc cgtgcagctt cgccgcgacc atcgcgaccc gccggccctg ataccgcgcg
      721 ccatccagct cgttttgcga cggctgccgc gacccattgc tgctggtaat ggtcgtggcc
      781 ccgtagggcg ccccgccaac cacctcatcc accgtcatct gcggcgcgaa gccatagtcc
      841 agaccgacca cgaccatgcc gaagtgcagc aggttggtga tgatcgaaaa caacgtcgtc
      901 tcctgcccgc catgctgggt ggccgaggcg gtaaacgccg cgcccacctt cccgttcagc
      961 gcgcccttgg cccacagccc gccggcctgg tcgaggaaat tcgccatttg cgacgacatc
     1021 cggccaaacc ttgtgccggt gccgacgatg atcgcgtcat agttctccag atccgcgata
     1081 actgcgaccg gggccggctg gtccagcttg aaatgcgaat tcttcgccac ctcggccggc
     1141 acaagctccg gcacgcgctt cacatccacc tcggcaccgg cttcgcgcgc gccctcggcg
     1201 acagcgttcg ccatcgcttc gatatggccg taagccgagt agtacagcac cagaaccttc
     1261 gccatcttcg atctccttca agtgtggccc atcgccaatg gccgtttagg tggtggacga
     1321 tcccggacat aacaattaga aattatggaa acatatcttt tcggttttga tggtcaaatt
     1381 acctgatctg gaggcgatgg cgatcttcgc caaggtcgtc gaaacgcacg ggatcaccgc
     1441 cgccgcgcgt gatctcggcc tgtccgcgcc cacaatttcc aaagccctga cccggctgga
     1501 aaaccggctg atcgcggctg ttcaatcgca catcccggcg gctggtgctt accgacgccg
     1561 gccggaccct ggccggccca gccgcggccc tgttggcgga cgccgaggcc gcggaaacca
     1621 cgatggtcgc ccagtccgtc actccgcgcg gttcggtgcg cttggcggcg ccgatgtcgt
     1681 tcggcgttca gaaggtcgca ccgatcctgc cggatttcat ggcccgctac ccggaggtct
     1741 ccatcgacct gcacc
//
LOCUS       DATAVD010001683         2183 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2392731, whole genome shotgun sequence.
ACCESSION   DATAVD010001683 DATAVD010000000
VERSION     DATAVD010001683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2392731"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..780
                     /locus_tag="VHX39_32310"
     CDS             <1..780
                     /locus_tag="VHX39_32310"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX3995877.1"
                     /translation="HADARALPVGNASMDVVTSFETIEHFDRQEDFVAEVRRVLRPDG
                     CFIVSTPDRDIYTPPGTTPNPFHVHEFDRVEFLDLLHRYFRYVSLIRQRPMLSSALIP
                     EEPASVAPLIFERVEDRTFASDIALPGAPYLIAIASEMVPKLAPVSLLIERGEADDFR
                     SADQEAELVRLRISETKAREDAETERQAAEAERETARTAVEAARKSVEQAEADAKAAT
                     VTLTHTRAALVEANTELELLSHSFWHFLRQYVARIWHRFVR"
     gene            1065..>2183
                     /locus_tag="VHX39_32315"
     CDS             1065..>2183
                     /locus_tag="VHX39_32315"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3995878.1"
                     /translation="MPEKLSAFVVTYNRASLLESCLRAVSFADELIVIDKSSTDNSAA
                     VAARYADRVERVPWSPTVEETRAFAASLCRHEWVLCLDDDEILSPETGPHLQRNLAEW
                     NADILTIPYRHYILGVHDERAYYWPEVRHCLFRKGAIEFIPTVHGGVALQSGRIVSIP
                     VSSGVCIHHLSYQDVAGWIERTNRYTSRPDRIQTEGGAGNLIQFAHDQIDYWMRRTDE
                     PSGNDYPTAVALLRAIYDMVDRLKAWEVERGVDGAEMFRDAQRSLLPAMEGRSDRAPI
                     QAGDGETGEPAATQLRHADADDVAADPSHIMVMQGMLVQLRAAEAQLRERTAAFRNSA
                     LSLTGARRDLAETIDALAATRLELDDTLGSRLIKPTMRW"
BASE COUNT          419 a          666 c          681 g          417 t
ORIGIN      
        1 cacgccgatg cgcgcgcgct gcccgtcggc aatgcctcga tggacgtggt gacttcgttc
       61 gaaaccatcg agcatttcga tcgccaggaa gacttcgtcg ccgaggtgcg ccgggtgttg
      121 cggcccgacg ggtgcttcat cgtcagcacg cccgaccggg acatctacac cccgcctggc
      181 actacgccca atccgttcca tgtgcacgag ttcgaccggg tcgagttcct cgatctgctg
      241 catcgctatt tccgctatgt ttcgttgatc cggcagcgcc ctatgctgtc gtcggcactg
      301 atccccgagg aacccgcctc ggttgccccg ttgatatttg agcgggtcga agatcggacg
      361 tttgcctcgg acattgcact gcccggagca ccgtatctca ttgcgattgc ttccgaaatg
      421 gtgccgaagc tggctccggt cagcttgttg atcgaacgcg gcgaggccga cgatttcagg
      481 tcggccgatc aggaagctga gttggtccgg ctgcgtatct cggagacgaa ggcccgcgag
      541 gatgcggaaa ccgagcggca ggcggcggaa gccgaacgcg aaactgcgcg aacggccgtt
      601 gaagccgcac gaaagagcgt tgaacaagcc gaggcggacg caaaggctgc gacggtgaca
      661 ctgacgcaca cccgcgccgc cctcgtcgag gccaataccg aactggagct gctgagccac
      721 tcgttttggc atttcctgcg gcagtatgtg gcgcggatct ggcaccgctt cgttcgctag
      781 gcactcaatc gctggttggc gcaggacgtt gcgaaggacg cgggctacgc tgcagccggc
      841 gactggtcgc catgttccgg cgcagacttg ccgtgacagc tgcaccatcg gcgatcaccc
      901 aatcacgccg gaccacgacg aattaacagc cgtgcctgac acccagagcc gcaatttgat
      961 cacctctggg ctacgcacga tggcgatggc ctcaatgctg ctggcgatcg atcaggccat
     1021 gcccggtcgg cagcggtgca tgccaggaag atcataggtt ggccatgccg gaaaaactca
     1081 gtgccttcgt cgtcacgtat aaccgtgctt cgctgctgga atcctgcctg cgtgcagtgt
     1141 cgttcgccga tgaactgatc gtgatcgaca aatcctcgac cgacaattcc gccgccgtcg
     1201 cggcgcgtta cgcggaccgg gtcgagcgcg tgccatggtc gccgactgtc gaagaaaccc
     1261 gcgcgttcgc ggcatcgtta tgccggcacg aatgggtgtt gtgtctcgac gacgacgaaa
     1321 ttctgtcgcc ggaaaccggc ccgcatttgc agcggaattt ggctgagtgg aatgccgaca
     1381 ttctgaccat tccatatcgt cactacattc tcggcgtaca cgacgagcgt gcctattact
     1441 ggccggaagt ccggcattgt ttgttccgca aaggtgcgat cgaattcatc ccaaccgtac
     1501 atggtggtgt tgcgctgcaa tccggccgta ttgtcagcat tccggtaagc agcggggttt
     1561 gtatccatca cttgtcctat caggatgtcg cgggttggat cgagcgcacc aaccgttaca
     1621 ccagcagacc ggaccgcatc cagaccgagg gtggcgcggg taacttgatt caattcgctc
     1681 acgatcagat cgactactgg atgcggcgca ccgacgagcc ctccggcaat gactacccga
     1741 ctgcggtcgc actgctgcgg gcgatttacg acatggtgga ccggctgaag gcgtgggagg
     1801 tcgaacgcgg tgtcgacggc gccgaaatgt ttcgcgatgc gcagcgcagt ttgctccccg
     1861 cgatggaagg gcgaagcgat cgagcgccaa tacaggccgg tgatggcgag accggcgagc
     1921 cggcagcgac gcagttgcgc cacgcggatg cagacgatgt ggcggctgat ccatctcaca
     1981 tcatggtgat gcaggggatg ctggtgcaat tgcgggcggc cgaagcccaa ctgcgcgagc
     2041 gcactgcggc tttccgcaac agcgcactga gtttaaccgg cgcgcgtcgt gacctcgctg
     2101 aaacgatcga cgcgctggcg gcgacccgcc tcgagctcga cgacacacta gggtccagac
     2161 tcattaaacc caccatgcga tgg
//
LOCUS       DATAVD010001684         2606 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1649317, whole genome shotgun sequence.
ACCESSION   DATAVD010001684 DATAVD010000000
VERSION     DATAVD010001684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2606
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1649317"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..759
                     /locus_tag="VHX39_32320"
     CDS             <1..759
                     /locus_tag="VHX39_32320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3995879.1"
                     /translation="MLSRHEAVDQYDHSSLRHVIYAGAPMYRADQIQALEKLGPVLVQ
                     YFGMGEVTGNITVLPPSCHSLDDSEMPVGSCGFPRTGMDVTILDDAGNHLPPDTTGEI
                     CVRGPGVFAGYHNNPEATEKATAFGWFHTGDLGHMDARGFVYITGRASDMYISGGSNV
                     YPREVEEVLLTHPAIAEVCVVGMPHEKWGETGVAVLVLNDGMSVTDQVLAAHIEGKLA
                     RYKHPATFVIWPELPKSGYGKVVKRDVRRLLEET"
     gene            756..1112
                     /locus_tag="VHX39_32325"
     CDS             756..1112
                     /locus_tag="VHX39_32325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019086937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DOPA 4,5-dioxygenase family protein"
                     /protein_id="HEX3995880.1"
                     /translation="MIDPTRVNGYHAHIYYDALSRQRAAELREAVEQRFEIRMGRWHD
                     VPVGPHPCAMYQIAFENDQFPTLAPFLMMNRMGLTILLHPESGRPRDDHTINAMWMGQ
                     VLPLITKILPEVSRSA"
     gene            1161..2345
                     /locus_tag="VHX39_32330"
     CDS             1161..2345
                     /locus_tag="VHX39_32330"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEX3995881.1"
                     /translation="MSALDDCYNVFDLRDAAKRKLPKAMFEFVDRSTEDEIALRNNRA
                     AFEKIRLRHRALVDVSGRSTKTTLFGKEISAPMAIAPTGAAGLCWYEGELELAKAAAK
                     MKIPFTLATGAMTSMEKIAREANFRLWFQLYVWKQRDLSYQLIERAKNNGFEALIVTT
                     DTIVPPNREYNAKNGLDLPFTPTLRFTRDILQRPGWFANVLLKYLTTIGMPRNENYPE
                     PYRRKIGDDPYRHEMMRQDSLNWDDIKIFRDMWPGILMLKGINRPDDALKAVSAGVDG
                     IVVSNHGGRNMDSAAATIDMLPEIAEAVGDKITVLLDSGVRRGSDIVKAMALGAKCVL
                     TGRATLYGTAVGGEAGASKAINIIRTEMDKTMAYTGCNRVDEITTDIFFGDRESNRLA
                     AQ"
     gene            2345..>2606
                     /locus_tag="VHX39_32335"
     CDS             2345..>2606
                     /locus_tag="VHX39_32335"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HEX3995882.1"
                     /translation="MSALDDCYNVFDLREAAQRRLPKGVFEFVDRATEDHIAVRDNRT
                     AFEEIKLRHRALVDVSGRSTSTTLFGKPVPMPMAIAPTGAAGL"
BASE COUNT          554 a          789 c          776 g          487 t
ORIGIN      
        1 atgctgtccc gccacgaggc ggtcgatcag tacgatcatt ccagtttgcg ccatgtcatc
       61 tacgccggtg cgccgatgta tcgcgccgat caaattcagg cgctggaaaa gctcgggccg
      121 gtgctggtgc aatatttcgg catgggcgag gtgaccggca acatcaccgt gctgccgccc
      181 tcgtgccaca gcctcgatga tagcgaaatg ccggtcggta gctgcggctt tccccgtacc
      241 ggtatggacg tgaccatcct ggacgatgcc ggcaaccatc tgccacccga caccaccggc
      301 gagatttgcg tgcgcgggcc cggcgtgttc gccggctacc acaacaatcc ggaagcgacg
      361 gagaaagcga cggctttcgg ttggttccac accggcgatc tcggccacat ggacgcgcgc
      421 ggtttcgtct acatcaccgg ccgagcctcc gacatgtaca tctcgggcgg ctcgaacgtg
      481 tatccgcggg aagttgaaga ggtcctgctg acccatccgg ccattgccga agtctgcgtc
      541 gttggcatgc cgcacgagaa atggggcgag accggtgtcg cagtgctggt tctgaacgac
      601 ggcatgtcgg tcaccgacca ggtgctcgcg gcgcacatcg aaggcaaact cgcccgctac
      661 aagcacccgg ccactttcgt aatctggccg gagctgccga aatccggtta cggcaaagtg
      721 gtcaagcgcg acgtcaggcg cttattggag gagacatgat cgatccaacg cgggtcaacg
      781 gctaccacgc gcacatttat tatgatgcgc tgagccggca acgcgctgcc gaactgcgtg
      841 aggcagtcga gcagcgtttc gagatcagaa tgggacgctg gcacgatgtg ccggtcgggc
      901 ctcacccctg cgcgatgtat cagatcgcat ttgaaaatga ccagttcccc acgttggcgc
      961 cgtttctcat gatgaaccgc atggggctga ccattctgct gcatccggaa tcaggccgcc
     1021 cgcgcgacga tcacacgatc aatgcgatgt ggatgggtca ggtgctgccg ctgatcacca
     1081 agatcctgcc cgaggtcagc cggtccgctt gacatggaat gccatgctcg catcatcggc
     1141 ggcccaaggg ggaaataacg atgtccgcgc tcgacgactg ctataacgta tttgacctgc
     1201 gggatgctgc gaaacgcaag cttcccaagg cgatgtttga attcgtcgat cgctcgaccg
     1261 aggacgagat cgcgttacgc aacaaccgcg ccgctttcga gaaaatccgc ctgcggcatc
     1321 gtgctttggt cgatgtgtcg ggccgttcga caaaaaccac tctgttcggc aaagaaatct
     1381 ctgcgcccat ggcgattgca ccgaccggcg ccgctgggtt gtgctggtat gagggcgaac
     1441 ttgaactcgc caaggcagcg gcgaaaatga agatcccgtt caccctggcg acaggcgcca
     1501 tgacgtcgat ggagaaaatc gccagggagg caaacttccg gctgtggttc cagctttacg
     1561 tgtggaagca acgcgacttg tcgtaccagc tgatcgaacg ggcgaagaat aacggatttg
     1621 aggcgcttat cgttaccacc gatacgatcg tgccgccgaa ccgcgaatac aatgccaaaa
     1681 acgggctcga tctgccattc acgccgacgt tgcggttcac ccgcgacatc ctgcaaaggc
     1741 ccggctggtt cgccaatgtg ctgctgaaat acctgaccac catcggcatg ccgcgcaatg
     1801 aaaattaccc cgagccgtac cggcgcaaga tcggcgacga cccttatcgg cacgagatga
     1861 tgcgtcagga ctccctcaac tgggacgaca tcaaaatctt ccgggatatg tggccgggta
     1921 tcctgatgct gaaaggcatc aaccgccccg atgatgcatt gaaagcagtc agcgccggcg
     1981 tcgatggcat cgtggtgtcg aaccacggcg gccggaacat ggacagcgca gctgccacca
     2041 tcgacatgct gccggagatt gccgaagcgg tcggcgataa aatcaccgtg ttgctggatt
     2101 cgggtgtccg ccgtggctcc gacatcgtca aagccatggc actgggtgcc aaatgcgtgc
     2161 tgaccggacg cgcgacattg tatggcaccg cggttggcgg agaggctggc gcctcaaaag
     2221 ccatcaacat catccgcacc gaaatggata agacaatggc ctacaccggc tgcaaccggg
     2281 tcgatgaaat caccaccgac atcttcttcg gcgatcgcga aagcaaccgg ttggcggcgc
     2341 agtgatgtcc gctctcgacg actgctataa cgtcttcgat ctgcgcgagg cggcgcaacg
     2401 ccggctgccg aaaggtgtgt tcgaatttgt cgaccgcgcg accgaagacc acatcgcggt
     2461 ccgcgacaac cgcaccgcgt ttgaagaaat caagctgcgg caccgtgccc tggtcgatgt
     2521 atccggccgt tccacatcga caacattgtt cggcaagccg gtccccatgc cgatggcgat
     2581 cgctccaacc ggtgccgctg ggcttt
//
LOCUS       DATAVD010001685         3549 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_719553, whole genome shotgun sequence.
ACCESSION   DATAVD010001685 DATAVD010000000
VERSION     DATAVD010001685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3549
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_719553"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1905
                     /locus_tag="VHX39_32340"
     CDS             <1..1905
                     /locus_tag="VHX39_32340"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3995883.1"
                     /translation="FVVDDAIVMIENIVRLMERGETPLRAAMLGARQIGFTVMSITLS
                     LVAVFVPVIFMGGLLGRLFHEFAMTLTLAILISAVVSLSMTPMICAHCLRSVAADVPH
                     GRIWRVIEASINGTIRFYARSLDWALRHQWLPLMVTVLTIVLTVKLYMVVPKGFLPEQ
                     DTGILIGSTVADPGISFQAMSERQRAAVAVLLADPAVAGAGSWIGVSAGWNSMNRGWI
                     DVSLKPLAERKVSSDQVIERLRSKLNRVGGIQTFLFAAQDLRGGGRQGGSQYQYAMIA
                     PDVTELRYWALQLEDRMKEIPGLTDVASDQDRAGPQVNVVIDRDAATRLGVSMAAIDN
                     ALNNAYSQRQLSTIYTQRNQYKVVLEIDPALQVDPSLLDRIYVGSAKGMQVPLSQVAR
                     FERGTSTLAVRHQGQYPAATLSFNLKPGYALGDAQTAVEKATVDLRLPDEVRTVFAGN
                     AQFFQKSLATQPLLIGAALISIYIVLGVLYESWLHPLTIMSTLPSAGVGALLALLITR
                     TDLSIMGIIGIILLMGIVKKNAIMMIDFALESERQRGLTPLDAIREACLVRFRPILMT
                     TLAAVFGACPLAFAFGTGAELRQPLGISIIGGLLVSQVLTLYTTPVVWLALERLVGHR
                     NAIVGAAPAE"
     gene            complement(1906..>3549)
                     /locus_tag="VHX39_32345"
     CDS             complement(1906..>3549)
                     /locus_tag="VHX39_32345"
                     /inference="COORDINATES: protein motif:HMM:NF012926.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HEX3995884.1"
                     /translation="LGSRQNGRWLIAPDGIVTQTTRRYLGDSLVLETVFETADGTVAL
                     IDFMTIEPSNVVRIVEGRSGAVSCQCELILRFDYGISIPWVTRLRTGNGIRAVAGPGQ
                     VIVRAEVPLQAKDMTTVADFTVKAGERVRFSLTYAPSHLPIPDAPDADTTLTEAETHW
                     NEWSDRSTYRGRWQAPVRRSLLTLKALTYLPTGAITAAVTTSLPEALGGIRNWDYRFC
                     WPRDSSFTLLALSDSGHRDEPRAWGDWLRRAVAGAPEQLQALYGLAGERFIPEREIHW
                     LAGYEASAPVRIGNAAMEQHQLDVFGEMELAFRREIDLGFVAPRAHWTMRRTLIEHLI
                     AIWQQPDESIWEVRGGPQQFTYSKAMAWAAMDCAIRSAEEHALPAPLDQWRKVRDEMF
                     DMVCKRGYNATVGAFTQTLDGDILDASLLLLPLIGFLPPSDPRIISTVDAIGRDLMAD
                     GLILRYHTHETEDGLPPGEGTFLACSFWYASNLSLQGRQDEAVALFERLLGLCNDVGL
                     LAEEYDHEACRQVGNFPQAFSHLALIGTALVLDGGVTTL"
BASE COUNT          681 a         1060 c         1101 g          707 t
ORIGIN      
        1 ttcgtggtcg acgacgcgat cgtgatgatc gaaaatatcg tgcggttgat ggaacgaggt
       61 gaaacaccgt tgcgtgccgc catgcttggg gcacggcaaa tcggcttcac ggtcatgtcg
      121 atcacgctgt cgctggtcgc cgtctttgtc ccggtcatct tcatgggtgg ccttctgggc
      181 cggctgttcc acgaattcgc catgactctg actttggcga tcctgatctc ggcggtcgtt
      241 tcgttgtcga tgacaccgat gatctgcgca cactgcctgc ggagcgttgc ggccgacgta
      301 ccgcacggcc gcatctggcg ggtgatcgaa gcgagcatca atggcactat ccgcttctac
      361 gcacgcagcc tcgattgggc gctgcgccac caatggctgc cgctgatggt gacggtgctg
      421 accatcgtgc tgacggtgaa actttacatg gtcgtgccga aaggctttct gccggagcag
      481 gataccggca tcctgatagg ctcgacggtg gccgatccgg gcatttcgtt ccaggccatg
      541 agtgagcggc aacgtgctgc ggtcgccgtg ctgttggccg atccggcggt ggcaggtgcc
      601 gggtcgtgga tcggtgtctc ggcaggctgg aactcaatga atcgcggctg gatcgatgtc
      661 agcctgaagc cgctggcgga acgcaaagtg tcgtccgatc aggtgattga gcgattgcgc
      721 agcaaattga accgcgtcgg cggcattcag acctttctgt tcgcggcgca ggatctgcga
      781 ggcggaggcc ggcagggcgg ctcgcagtat caatacgcca tgatcgcgcc ggatgttacg
      841 gaattgcgct attgggcctt gcaactggaa gaccgcatga aggagatccc cgggctgacc
      901 gacgtcgcct ccgatcagga ccgggccgga ccgcaggtca atgtggttat cgaccgcgat
      961 gcagcgacgc ggcttggggt cagcatggcg gcgatcgaca atgcgctgaa caatgcctat
     1021 tcgcaacggc aattgtcgac gatttacacc cagcgcaatc aatacaaggt cgtgctggaa
     1081 atcgatccgg cgttgcaggt cgatccctca ctgctggacc ggatttacgt tgggtccgcc
     1141 aagggcatgc aagtgccact ctcgcaggtg gcgcggttcg agcgtggcac gtcgaccttg
     1201 gcggtccgcc atcagggcca gtatccggct gcgacgctca gtttcaatct taaaccggga
     1261 tatgctttgg gcgatgcaca gacggcggtg gaaaaagcca cggtcgatct gcggctgccc
     1321 gatgaggtgc ggacagtgtt cgccggcaat gctcagtttt tccagaagtc attggcgacc
     1381 caaccgctgt tgatcggcgc ggcattaatc tcgatctata tcgttctggg cgtgctgtat
     1441 gagagttggc tgcatccgct gaccatcatg tccacgctgc cgtcagcggg cgtcggcgca
     1501 ttgctggcac tgctgatcac caggacggat ctgtcgatca tggggatcat cggcatcatc
     1561 ctgttgatgg ggatcgtgaa gaaaaacgcc atcatgatga tcgatttcgc tttggaatcg
     1621 gaacgccaac gtgggttgac accgctggat gcgattcggg aggcctgtct ggtgcgcttc
     1681 cgtccgatcc tgatgacgac gctggcagcc gtgttcggcg cctgtccgtt ggctttcgca
     1741 ttcggcaccg gtgccgaatt acgtcagccg ctggggattt cgatcatcgg cggattgctg
     1801 gtgtcgcagg tgctgacgct ctacacgaca cctgtggtgt ggttggcact cgaacggctg
     1861 gtgggacatc gcaatgcgat tgttggtgcc gcaccggcgg agtgatcaga gcgtcgtcac
     1921 cccgccatcg agcaccaacg ccgtcccgat caaggccaaa tgcgagaatg cctgtggaaa
     1981 attgccgacc tgccggcacg cctcgtgatc gtattcctcg gccaacaacc cgacatcgtt
     2041 gcacaacccc agcaaccgtt cgaacaacgc aacggcctcg tcctgccggc cctgcaacga
     2101 taaattcgac gcgtaccaaa agctgcacgc gagaaaagtg ccttcgcccg gaggcaaccc
     2161 atcctcggtt tcgtgtgtgt ggtatcgcag gatcaaacca tcggccatca aatctcggcc
     2221 gatcgcatcg acagtgctga tgatccgcgg gtcactcggc ggcagaaatc cgatcagtgg
     2281 cagcaacaac aggctcgcat ccagaatgtc gccgtccaat gtctgagtga aagcgccgac
     2341 cgtggcgttg tagccgcgct tgcacaccat atcgaacatc tcgtcgcgca ccttgcgcca
     2401 ctgatccaac ggagcgggca gggcgtgttc ctccgccgac cggatcgcgc aatccatcgc
     2461 agcccaggcc atggctttgg aataggtaaa ttgctgcggg ccgccgcgga cttcccagat
     2521 gctttcatcc ggctgttgcc agatcgcgat caggtgctcg atcagcgttc gacgcatggt
     2581 ccaatgggcg cgaggtgcca cgaagccaag atcgatctcg cggcgaaacg ccagctccat
     2641 ttcgccgaac acatccaact ggtgttgttc catggcggcg ttgccaatcc gcaccggcgc
     2701 tgaggcctcg tagccggcca gccaatggat ttcccgctcg gggatgaagc gctcgccggc
     2761 aaggccatac aacgcctgca gttgctccgg cgctccggcg accgcacggc gtaaccaatc
     2821 gccccacgca cgcggctcat cccggtgacc ggaatcgctc agggcgagca aggtgaagct
     2881 ggaatcccgc ggccaacaaa accggtaatc ccagttgcga atcccaccaa gtgcttccgg
     2941 cagtgaggtt gtgactgcgg ccgttatcgc accggtggga agataagtga gcgccttgag
     3001 cgtcaaaagc gaacgtcgta ccggagcctg ccagcgtccg cgataggtgg aacgatccga
     3061 ccattcgttc caatgcgttt cggcttcggt cagggtggtg tcagcgtcag gtgcgtccgg
     3121 aatgggcaaa tgggacggtg cgtaagtcaa cgaaaaccga acgcgctcac ccgccttcac
     3181 ggtgaagtcg gcgacggtgg tcatgtcctt ggcctgcaac ggcacctcgg cccggacaat
     3241 gacctggcca ggcccggcga ctgctcggat cccattgccg gtgcgtagcc gggtcaccca
     3301 cgggatcgaa attccgtagt cgaaccgaag tatgagttcg cactggcatg acactgcgcc
     3361 gctccgcccc tcgacgatgc gcacgacatt cgatggctcg atggtcatga agtcgatcag
     3421 agcaaccgtg ccgtcagcgg tctcgaagac cgtctccaac accaggctat cgcccagata
     3481 gcggcgcgtg gtttgcgtca cgatgccgtc cggcgcgatg agccagcgtc cgttctgccg
     3541 ggaacccag
//
LOCUS       DATAVD010001686         4486 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2583585, whole genome shotgun sequence.
ACCESSION   DATAVD010001686 DATAVD010000000
VERSION     DATAVD010001686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4486
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2583585"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..855
                     /locus_tag="VHX39_32350"
     CDS             <1..855
                     /locus_tag="VHX39_32350"
                     /inference="COORDINATES: protein motif:HMM:NF021624.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /protein_id="HEX3995885.1"
                     /translation="HWNCMYFSEVADAMATAKLDFATTAEPLDVVDTVNLTAAGMACL
                     NGIAHPILREQVRDYFVNKQFRKDLYLRGLRRLAPPELREKVLTTRIVLESLVDTIPM
                     TVNGGQGTAILQEGIFRPLLGALASSDYAPKSFDNLLQALPGVSLPQLVMASAVLVGA
                     GNAAPCQSEASVREVRAKCASLNRHLLDRARTRDDVNHLASPVTGAGIAVGRFQQLFL
                     LVRSRGYEQPTDWAQFIWQLLDEQGHKVLKDGRALATPEENLAELTAQANEFAVNRLP
                     ILRAVEIV"
     gene            complement(867..1781)
                     /locus_tag="VHX39_32355"
     CDS             complement(867..1781)
                     /locus_tag="VHX39_32355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995886.1"
                     /translation="MMVRNDLRLEIIEHRIPTPNCRPYIIAEGPDRCLWFCESGPGQI
                     GRLSPLDGSIVEYRLPDPAGTPIGIVAGSDGAMWFTQSTAHNVGRITMDGAISEFELP
                     TPHAGPNGITLGPDGNIWLAEHAIGKVARITPQGQVTEFGGFAPGGRPLAPTATATHV
                     WVSDSVASRVARINMAGRVTEFATPRPNSGPRAIVPGPDGNIWLVLAEGNAIARVSPH
                     GEMQEFPLPTANASPRGIVVARGNEIWFTENLVNRIGRMSLEGELLAEYELPTPASGP
                     RAMVSLQDGRLFFSQHDIGCIGEIRFAH"
     gene            1868..2812
                     /locus_tag="VHX39_32360"
     CDS             1868..2812
                     /locus_tag="VHX39_32360"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3995887.1"
                     /translation="MHGPDLFSASRTCYALAGHEGETAMRQIRIGDITVDAVIEREGP
                     WRMPKDFFPLYDEATFQHHLPVMEPEVFDAASGKMCITYQTFVVRSPRHTILVDTCTG
                     EDKGHAAPFDFPGKERWRNELFALGVSYDKIDYVFCTHLHIDHTGWNTTLRDGRWVPT
                     FPNAKYIFHKREYAAWEAEHAKGANPPGTVFRDNCLPIVEAGQALLVDDDYALDDTIT
                     LTPTPGHSPCHCCVNIFSGGQRAVVTGDMMHHAIQCREVDWSPGVDWDPKQAAVSRRT
                     FLSSVADTDTLLMPIHFPSPTCGLVTSDGDRFHYRFRR"
     gene            2820..4025
                     /locus_tag="VHX39_32365"
     CDS             2820..4025
                     /locus_tag="VHX39_32365"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEX3995888.1"
                     /translation="MSGIDSAINIDDLRRLAKRRLPKIMFDFIEGGVEDEVGLRANAS
                     AFRDVRLVPRYYVDTSKREQRATLFDRSYASPFGIAPTGMAGAFRRDAELYLSQAAAE
                     ADVPYLMSGASNASMEQGAKLAGKNLWYQIYGARDRYVAADLVKRAIDLGLTTIAVTC
                     DVPVASNRERNRRNGFVRPLRMTLPTILEAMLHPAWVINYYRTGGLPMLGNWQPYAAK
                     DASPDQVADLFASQTPDPSQTWRDLEAIRNAWPGKLLLKGVLHPEDARLAIGMGVDGL
                     IVSNHGGRQLDMAPSPLDMLPMIRSAVGPDVPLLLDSGVCRGSDIVAALCLGANFVLT
                     GRATLYGATAGGLPGVKKAVSILQREIDLVLGQIGALNLDALGPQFLLDTVRADEERR
                     NTGAMAGRR"
     gene            complement(4171..>4486)
                     /locus_tag="VHX39_32370"
     CDS             complement(4171..>4486)
                     /locus_tag="VHX39_32370"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3995889.1"
                     /translation="PSYANRSDTVTRCFPDRVGPLPKKNPTAYLKDGQLFFDTIVFTP
                     EALRHLIAESGPGQIMIGTDYPFPWTSTEVDLVLNTPGLSDDQRIAILGGTAARLLGI
                     AP"
BASE COUNT          865 a         1391 c         1369 g          861 t
ORIGIN      
        1 cattggaatt gcatgtattt cagcgaagtg gctgacgcga tggctaccgc aaagctcgat
       61 ttcgccacta ccgccgaacc gctggatgtc gttgatacgg tgaacctgac cgctgcaggc
      121 atggcatgcc tgaacggcat cgcacatccg atcctgcggg agcaggttcg tgattatttc
      181 gtcaataaac agttccgcaa ggacctgtac ctgcgcggtc tccgtcgcct tgccccgccc
      241 gaattgcgag agaaggtgtt gacgacacgc atcgtgctgg aaagcctggt cgatacaatc
      301 cccatgacgg tgaacggcgg acaaggtacg gcaatactgc aggaaggcat ctttcggccg
      361 ctcctcggcg cattggcaag ttcggattat gcgccgaagt cgttcgataa tctgctccag
      421 gctctgcctg gggtttcatt gccgcaattg gtgatggcca gtgcggttct tgtcggggca
      481 ggcaacgctg cgccgtgcca atcggaagcc tctgtccgtg aggtccgggc aaagtgtgct
      541 tcgctcaacc ggcatctgct tgaccgtgcg cgaacgcgtg acgacgtcaa ccacctcgca
      601 agtccggtca ccggtgccgg cattgccgtc ggacggttcc agcagctatt cttgctggta
      661 cgcagccgtg gttacgagca gcccacggat tgggcgcagt tcatctggca actcctcgac
      721 gaacaggggc acaaggtcct caaggacggc agggctttgg caacgcctga ggaaaatctc
      781 gccgaactga cagcgcaggc gaacgaattt gccgtgaacc ggctacctat cctacgggct
      841 gttgagatcg tgtgatcaag gctcgttcag tgggcaaacc ggatctcgcc gatgcacccg
      901 atgtcgtgct gcgagaagaa caacctccca tcctgcagcg agaccatcgc gcgcggcccg
      961 gacgccggcg ttggcaattc gtattccgcc agcaactcgc cttccagcga catacgtccg
     1021 atccggttga ccaaattttc cgtgaaccag atttcattgc cgcgcgctac gacgatgcct
     1081 cgcggactgg cattcgctgt cggcagtggg aactcttgca tttcgccatg cgggctgacc
     1141 cgtgcgattg cgttgccttc cgcaagcacg agccagatgt ttccgtccgg accgggaaca
     1201 atggcacgcg gcccgctgtt cggccgaggt gttgcgaact cggtcacccg accggccata
     1261 ttgatccgtg cgacccggct tgcgaccgaa tcactgaccc aaacgtgcgt ggcagtggca
     1321 gtcggtgcca gcggccggcc accaggagca aaaccaccga actcggtcac ctgcccctgc
     1381 ggcgtgatcc gggccacctt accgatggca tgctccgcca gccaaatgtt gccgtccggc
     1441 ccaagggtaa tgccgttcgg accggcgtga ggcgtcggca gctcaaattc cgatatggca
     1501 ccatccatcg taatacggcc gacgttatga gcggtcgatt gagtgaacca catcgcgccg
     1561 tccgaacccg cgacgatccc gatcggggtc ccggccgggt cgggaagccg atactcgacg
     1621 atgctcccgt ccagcggtga cagccggccg atctgcccag gacccgactc gcagaaccac
     1681 aagcatctgt cgggaccttc tgcgataatg tagggtctac agttcggcgt ggggatgcga
     1741 tgttctataa tctcaagccg gagatcgttg cgcaccatca tttgacccat cctggctgac
     1801 cggactgcga agcgggccag acttaccgat cgtcgccgcg ttgtcactgg cgcggagcgg
     1861 cgaacgcatg catggcccgg acctgttctc ggcgtctcgc acttgctacg ctctggctgg
     1921 ccacgagggg gaaacggcga tgcggcaaat caggatcggc gacattacgg tcgacgcggt
     1981 gatcgagcgc gagggcccat ggcgaatgcc gaaggatttc ttcccgctgt acgacgaggc
     2041 caccttccag catcacctgc cggtcatgga gccggaagtg ttcgatgccg cctcgggcaa
     2101 gatgtgcatc acttaccaga ccttcgtggt ccgctcgccg cgccacacca tcctggtgga
     2161 tacctgcacc ggcgaggaca aaggtcacgc cgcgccgttt gattttcccg gcaaggaacg
     2221 ctggcgcaat gagctgtttg ccttgggcgt cagctacgac aaaatcgact acgtattttg
     2281 cacccatctc cacatcgacc acaccggctg gaacaccacg ttgcgtgacg gccgctgggt
     2341 accgacgttt ccgaacgcga aatacatatt ccacaaaagg gaatacgcgg cctgggaagc
     2401 cgagcacgcg aaaggcgcca atccacccgg aacggtattc cgggacaact gcctgccgat
     2461 cgtggaggcc ggccaggcgc tgttggtgga tgacgactac gcactggacg acacgatcac
     2521 gctaacgccg acaccgggcc actcgccgtg ccattgctgc gtcaacattt tctccggcgg
     2581 ccagcgcgcg gtggtgaccg gcgatatgat gcaccacgcc atccagtgcc gggaggtcga
     2641 ctggtcaccc ggcgtcgatt gggatccgaa acaggcggca gtatcgcgcc gaacatttct
     2701 gtcgtcggtc gccgataccg acacgttgct gatgccaatc catttcccct cgcccacgtg
     2761 tggcctggtg acgtcggatg gcgaccggtt ccattaccgg ttcaggcgat agtcgtcaca
     2821 tgtccggcat cgacagcgcg atcaacatcg acgacctccg tcggctggcg aagcgccgcc
     2881 tgccaaagat catgttcgac ttcatcgaag gcggcgtgga ggatgaggtc ggcctgcgcg
     2941 ccaacgccag tgcgtttcga gatgtacgac tggtgccgcg ctattacgtc gacacatcga
     3001 aacgtgagca gcgcgccacg ctgttcgatc gcagctatgc cagcccgttc ggcatcgcac
     3061 cgaccggtat ggccggcgcg ttccgccgcg atgccgagtt gtacctgtcg caggcggcgg
     3121 ccgaagccga cgtgccgtat ttgatgtcgg gggcgtccaa cgcatcgatg gaacaaggtg
     3181 cgaagctggc cggcaaaaac ctctggtatc agatctacgg cgcgcgcgac cgctatgttg
     3241 ctgctgatct ggtaaaacgc gcgatcgatc ttggccttac gacgatcgca gtgacctgcg
     3301 atgtcccggt ggcgtcgaac cgtgagcgga atcgccgtaa cggtttcgtc cgtccgcttc
     3361 ggatgacgtt gccgacaata ctcgaggcca tgctgcaccc tgcctgggtc atcaactact
     3421 accgcacggg cggcctgccg atgttgggca attggcagcc ttatgccgcg aaagatgcca
     3481 gtcctgacca ggtggccgat ttgtttgcca gccagacgcc tgatcccagc cagacctggc
     3541 gagacctcga agcgatccgc aacgcctggc cgggcaagct tctgctgaag ggcgtgctgc
     3601 atccggaaga tgccaggctt gccatcggaa tgggagtgga cgggctcatt gtctcgaacc
     3661 atggcggtcg tcagctggac atggctccgt cgccgctgga catgctgccg atgatccggt
     3721 ccgcggtcgg accggatgtg ccgttgttgc tggacagcgg ggtctgccga ggctccgaca
     3781 ttgttgccgc tctgtgtctt ggcgcgaatt tcgttctgac cggccgggcc actctgtatg
     3841 gcgccactgc gggtggattg cccggagtta agaaagccgt ctcgatcctg caacgtgaga
     3901 tcgatctcgt gctcggccag atcggcgcgc tgaacctgga cgcacttggt ccacagtttt
     3961 tgctcgacac ggttcgcgcg gacgaagaac gtcgcaatac cggcgcaatg gcgggacgac
     4021 gctgacagat ccggctaccg gcgcgcagtt atctggcgat ctgccttacg ccgcggcgct
     4081 gccgggccgg tctgcgcccg gtttgaactc ggaaatgatg cgatgacagg cgcggtggga
     4141 gcatcgcacc gcgccgccaa aacccgctgt tcagggagca atccctaaca gccgcgccgc
     4201 cgtcccacca aggatcgcga tccgctgatc atcgctcaac ccaggcgtat tgagcacgag
     4261 gtcaacctcc gtactggtcc acgggaacgg gtaatcggtc ccgatcataa tctgccctgg
     4321 gccggactcg gcgatcaggt gacgcagggc ctcaggcgta aacacgatcg tgtcgaagaa
     4381 cagttggcca tccttcagat acgcagtcgg atttttcttc ggcagcgggc caacccgatc
     4441 aggaaagcat ctagttacgg tatcagaacg attggcgtaa gatggc
//
LOCUS       DATAVD010001687         2206 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2393447, whole genome shotgun sequence.
ACCESSION   DATAVD010001687 DATAVD010000000
VERSION     DATAVD010001687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2393447"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1370)
                     /locus_tag="VHX39_32375"
     CDS             complement(<1..1370)
                     /locus_tag="VHX39_32375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEX3995890.1"
                     /translation="MTSTISTRAAKRGDRRDWGLARLTVLALGLGIGTGFGAVLFRDL
                     IGLLHNLFFYGVLAVHYDANVFTAPSRWGLLVLLVPVVGAVIVTFVVSNFAPEAKGHG
                     VPEVMDAIYYQEGVIRPIVVLVKSLASAVAIGSGSSVGREGPIIQIGSALASTVGQLV
                     RIPTGQRITLVAAGAGAGIAATFNTPIGGVMFAIELMLPEVSVATFLPVAISTGAATF
                     VGRWFFGPAPAFLVPPMQPLTADPSAILILALYAVLGCVIGVAAGGFVRGLHLFEDWF
                     DKIPWQYPRHILGMLCLGVLMVVLFHSLGQYYVDGVGYATIESILVGDTGVFWLLGLL
                     FACKLLATCLSLGSGSSGGIFSPSLFMGATLGGCFAAALIDLGIPLHISVPAFAMVGM
                     GAMVGGGTGAVMTAVTMTFEMTLDYGIVMPMILAVATSVGVRRMLSRENIYTLKLARR
                     GRTIPKA"
     gene            1698..2126
                     /locus_tag="VHX39_32380"
     CDS             1698..2126
                     /locus_tag="VHX39_32380"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEX3995891.1"
                     /translation="MGRSGDGPSDLGLYESLAGFRFALRRFLAFSEAATRAAGVTAWQ
                     YQAMLAIKTHPNGAIVIRELADQMLSQHHGAVQLVDRLCKAGLARRTYSVKDRRTVLV
                     VLTAKGARLLGRLASAHKNELMRYETLLAESLTRLRNIER"
BASE COUNT          490 a          692 c          630 g          394 t
ORIGIN      
        1 gcttttggaa tcgtgcgacc gcgccgcgcc agcttcagcg tgtagatgtt ctcacgcgac
       61 aacatccgtc gaacgccgac gctggttgcc accgccagga tcatcggcat cacaattcca
      121 tagtcgagtg tcatctcgaa cgtcatggtg acggcagtca tcactgcgcc ggtgccgcca
      181 ccgaccatgg cgcccattcc aaccatcgcg aacgcaggga cgcttatgtg aagcggtatg
      241 cccaggtcga tcagggctgc tgcgaagcag ccacccagcg tcgcacccat gaacaaagac
      301 ggcgagaaaa tgccgcccga cgatcccgaa cccagactta agcaggtcgc aagcagtttg
      361 cacgcgaaca acagtcccaa cagccagaat actcctgtgt ctccgaccag gatgctctcg
      421 atcgtcgcgt agccgacacc gtcgacataa tactggccaa gcgagtgaaa cagtacgacc
      481 atcaggacgc ccaggcagag catcccgagg atatgccggg ggtactgcca ggggatctta
      541 tcgaaccagt cttcaaaaag gtgcaggcct cgcacaaacc cccccgccgc cacgccgatc
      601 acgcatccta aaaccgcgta gagagcaagg atgaggattg cgctggggtc ggcggtcagc
      661 ggttgcatcg gcggcaccaa aaaagccggc gccgggccaa agaaccaacg tcccacgaat
      721 gtcgccgctc ccgtcgagat ggcgacaggc aggaatgtgg caacacttac ctctggcagc
      781 atcagttcga tggcgaacat cacgccgcca atcggagtgt tgaaggtggc tgcgattccc
      841 gctcctgccc cggcggcgac cagcgtgatt cgttggcctg tcgggatgcg gaccagttgc
      901 ccaacggtcg atgccaatgc agaaccgatt tgaatgatcg ggccttcgcg acccacagac
      961 gacccgctgc caattgcaac ggcggacgcc aaagacttca ccagaacgac gatcggccgg
     1021 atcaccccct cttgataata tattgcgtcc atcacttcgg ggacgccatg tccctttgcc
     1081 tccggtgcga aattcgatac gacaaacgtg acgattacgg cgccgacgac cgggaccaga
     1141 agcacgagca gcccccatcg gctcggcgcg gtgaatacgt tggcatcgta atgaacggcg
     1201 aggacgccat aaaagaacag gttgtgcagc agaccaatca ggtcgcggaa cagcacggcg
     1261 ccgaatcccg tgcctatccc taatccaagc gcgaggacgg tgagccgagc caatccccag
     1321 tcgcgccgat cacctcgttt cgcggcgcgg gtgctgatag tcgaggtcac gagctttttt
     1381 catcctctcc ggcaagacca ggcatcgaga aatgactcct ctgccggcca ccctgggtcg
     1441 ccaagacaac agcacgcata cgtccccctc gcttccatgg tgttcaaacc aaggcgtccg
     1501 acgggaaccc tgggcacacg tgatggtcag ctctctatct atcatgccgt gatatattcc
     1561 aacgcggcag gacatattgc aagtctcggc atgacgcatt ggcccggctg cggtttgttt
     1621 cggcctggcc cattgtgatg tctcgagcgc tcggataacc cagccgtgtt tggaaaccca
     1681 cgccaagggg tggcgccatg ggccgaagcg gcgacgggcc gtctgatttg ggtttgtacg
     1741 aaagtcttgc gggatttcga tttgcgttac ggcgctttct cgccttcagc gaagccgcga
     1801 cccgggccgc gggcgttacg gcctggcaat atcaggcgat gctcgccatc aaaacacacc
     1861 ctaacggtgc gatcgtgatc cgtgaactcg cggatcagat gttgtcgcag catcacggcg
     1921 ccgtgcaact tgtcgaccgg ctttgtaaag ccggcctcgc gcggcgaacc tattcggtga
     1981 aagatcgccg gaccgttctg gtggtgctaa cggcaaaggg cgccagactt ctgggccgcc
     2041 tggcatcggc gcacaagaac gagttgatgc gatacgagac tctgctggct gaatcgctga
     2101 cacgactcag aaacatcgaa cgctgatctt aaagcaaacg gcgatctgtg ccgcatggcc
     2161 gctaccagcc acgggcatca cgtctccgga tttttgcccg cgcgaa
//
LOCUS       DATAVD010001688         2580 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_345714, whole genome shotgun sequence.
ACCESSION   DATAVD010001688 DATAVD010000000
VERSION     DATAVD010001688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2580
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_345714"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..625)
                     /locus_tag="VHX39_32385"
     CDS             complement(<1..625)
                     /locus_tag="VHX39_32385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEX3995892.1"
                     /translation="MKAAILNALGTPLAIETLPDPVLGTGEVIVDVVATRVLSYTNEV
                     LSGERNYSLHLPVVPGVGAIGRVRKVGPDATRLAPNDWVYCDPTVRSRDDALSPDILL
                     QGWSARSDGGLRLQQHFRHGSFAEQIRVPTENAVRIGAIDPAAAPSWCAMGTLLVPYG
                     GFLAANLQAGETVLVSGATGNFGSAAVAVALAMGAACVIAPGRNESAL"
     gene            745..1518
                     /locus_tag="VHX39_32390"
     CDS             745..1518
                     /locus_tag="VHX39_32390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX3995893.1"
                     /translation="MADPRRGELGDFLRSRRDRLTPKIVGLPNGRRRRTVGLRREEVA
                     ELAGIGVDWYIRLEQGRAVSPSVTTVDALARALRLSKAEHVHLRALAHSAGRRPFVRE
                     SVPVTIGRVVGSLNQPAYVTGRRWDILVWNDAADEVFAFSRLAEEDRNALICVLTNPN
                     VRRLFGASWAGEAERMVAEFRATHDLWAGDPAFLELLDRLRRGCPEFASWWEAHDIRR
                     GGTGEKRLHHPGKGLLRFAYATFQANDDPALKLVIYTPV"
BASE COUNT          434 a          703 c          877 g          566 t
ORIGIN      
        1 cgagggctga ctcgttgcgt cctggcgcga tgacgcaggc cgcgcccatg gccagggcta
       61 ccgcgacggc ggcgctgccg aaattcccgg ttgcgccgct gaccaggacg gtctcgccgg
      121 cttggaggtt ggcggcgagg aaaccgccgt aggggacgag aagcgtgccc atcgcacacc
      181 atgacggggc ggcggctggg tcgatcgcac cgatccgcac ggcgttttcc gtcggcacgc
      241 ggatttgttc ggcgaacgag ccgtggcgga agtgctgttg caggcgcagg ccgccgtcgc
      301 ttcgggcact ccagccttgc agcaggatgt cgggggacag agcgtcgtcg cgcgagcgta
      361 ccgtcgggtc gcagtagacc cagtcgttcg gggcaaggcg tgtcgcatcc ggccccactt
      421 tccgcacacg gccgatcgcg ccgacgcccg ggaccaccgg cagatgcagc gaatagttgc
      481 gttcgccgct gaggacttcg ttcgtgtagg acagcaccct tgttgcgacg acatcgacga
      541 tcacctctcc ggtgcccagc accgggtcgg gcagggtttc gatggccagt ggtgttccga
      601 gtgcattcag tatggcggct ttcatgggat gtgcctccag gtgtgggtca ttggatgggg
      661 tcttttcgca cgcttcaccg atgcatccag gcctggtagt atcctgggat tggagagtcc
      721 ctccctgggc atggagtcag tgcgatggcg gatccgcgcc gcggtgaact cggcgatttc
      781 ctgcgttcac gacgagaccg gctgacgccg aagatcgttg ggctaccgaa cggacggcgg
      841 cgacggaccg tggggctgcg gcgtgaggag gtggccgaac tcgctgggat cggtgtggat
      901 tggtacatcc ggctggaaca agggcgggcc gtcagtcctt cggtcaccac cgttgacgcc
      961 ctggcgcggg cgctgcggct cagcaaggcc gaacatgtgc atctgcgggc gttggcgcat
     1021 tccgccggcc gccgtccatt cgtccgggag agcgtgcccg taacgatcgg gcgcgttgtg
     1081 ggaagcctca atcagccggc ctatgtcacc ggccgccggt gggacatcct ggtttggaac
     1141 gatgccgcgg acgaagtctt cgcgttcagc cgcctggccg aggaagaccg caacgcgctg
     1201 atctgtgtgc tgaccaaccc gaatgtgcgg cggttgttcg gggcgtcctg ggcgggggag
     1261 gcggagcgga tggtcgccga atttcgggcg acgcatgatc tttgggctgg ggatccggct
     1321 tttctcgaac tgctggaccg gcttcggcgg ggttgtcctg aattcgcgtc gtggtgggag
     1381 gcgcatgata tccgccgcgg cgggaccggt gagaagcggt tgcaccaccc cgggaagggt
     1441 ttgttgcgct tcgcgtatgc gacgttccag gccaatgacg atccggcgct gaagctggtt
     1501 atctatacgc cggtgtgatg gtggtgtcgg gcgcggtggc cgctcgtatg gggcctacaa
     1561 cgccgtgctt gccgatgaag gtcggatttg cgttcgacga atggtggtgg tttcgcctcc
     1621 gcatttaaca cagaggccgc cgagtgctca gagaagatga attgggtgca gtcgacaaat
     1681 aagaattggg accgaaaatg aacgaatata gataagaata tatgtcagcg ataccgagcg
     1741 gctcgacctc gatcattggc catttttatc ttacttattt gcgtttgtct gcgttcattt
     1801 gcggttccat attctttcct ggaccaacca aatccgccgg cgggcgacat cgtgccgatt
     1861 tcaattgtga taccaagcgc ccttgatgtc gacccatcag caccgccgtg caaccgtcat
     1921 ggcgagcgca ggcttcgcca tccatgcctt tgtttccgct cgtaaaaggc gtggatgccg
     1981 acctccgtcg gcatgacgga cggggtcaac cgaagagtct gcgtcaacgc cggtcggtat
     2041 gattgccctg atcatatcat cgttagatgg ttatggcgtc gatatcagaa tgttaaattc
     2101 cgccttcatt gcgtattgct ttagcgattt gatatgcctc ttatccaagg gtaaggtgtt
     2161 cggtaaaaaa gatggcctgt ccggcacggt ttctcatcca ctcacgtggc ttatgttgcg
     2221 tatctgttga tttcaatgat tggggtgctg aacgcgctgg gtggcatgtg tggggacgcc
     2281 cagcaatgat cgctccaggt gggtcgttcc gtacccgccg tgttgatggc tgttgggaga
     2341 gccgccgcac ttcgtcgtgg tggatcggaa agtgatcaag cggattgcgg cgtttcgctg
     2401 agtttgcgcg gagtttctcg gaggcgtgct ggtgggtttg acctgcggat tcgatggcaa
     2461 ttgcgggcgt tccgagcagt cggcgagagg caatcatccc gaccgctaga attagtcgag
     2521 gcttttacaa atcagggtat tggatgctgc cggctgattt tcgtctcggc gagcctccgg
//
LOCUS       DATAVD010001689         4215 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_346208, whole genome shotgun sequence.
ACCESSION   DATAVD010001689 DATAVD010000000
VERSION     DATAVD010001689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4215)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4215)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4215
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346208"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..563
                     /locus_tag="VHX39_32395"
     CDS             <1..563
                     /locus_tag="VHX39_32395"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3995894.1"
                     /translation="TATMSWPANVEGIHFLLDEVWPTLVAARPCINAVIIGRNPPASL
                     ADKIRQRGLNVTLTGFVDDIRPYVAQSHVYVIPLFVGSGTRIKAFEAMAMGRPVVSTS
                     LGIEGLDVTDGEHFLRADDAISFSRGILALLDDDALRHRVAGAARRLMEQRFSWKTVA
                     AQFEAICQEALERRRQARHRVNSPGD"
     gene            complement(603..1823)
                     /locus_tag="VHX39_32400"
     CDS             complement(603..1823)
                     /locus_tag="VHX39_32400"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3995895.1"
                     /translation="MNDALIQSLNLSDTVCTPCELTILMPCLNEAETLVTCIGKAFSY
                     LERSGVRGEVLVADNGSTDGSQAIAVAAGARIEAIDGKGYGSALLGGIRAARGRYVIM
                     GDSDDSYDFSELDAFVAKLREGHALVMGNRFKGGIRPGAMPLLHRYVGNPVLTTVGRV
                     FFRSPCGDFHCGLRGFERAAILDLDLQAPGMEFASEMVVKATIHNLKITEVPTTLAPD
                     GRSRPPHLRSWRDGWRHLRFLLLFSPRWLFLYPGLGLMAVGVASMVWLLPEPRMVGRI
                     TLDIHTLFYASLAVVVGFHSALFYLFARLYGMREGLVPPDERFLRMTGALTLESGLLV
                     GLLLLLMGIGLAVVALSAWSQAAFGVLSPESAMRLVIPSGTCILLAFQTAYGAFFLSV
                     LEIRSRKRVPVADR"
     gene            2174..3670
                     /locus_tag="VHX39_32405"
     CDS             2174..3670
                     /locus_tag="VHX39_32405"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018478 - malonate-semialdehyde
                     dehydrogenase (acetylating) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEX3995896.1"
                     /translation="MQEIGHFIGGKPAAGTSGKFGDVYNPAAGEVTARVALASTAEVN
                     AAVASAAAAWPSWAATPPLRRARVMFKFKELLERDRKELSAIITGEHGKVLSDADGEV
                     QRGLEVVEFACGIPHLLKGEYTEMVGTGIDAWSIRQPLGVVAGITPFNFPLMVPLWML
                     PVALACGNCFILKPSEKDPSVSLKVAALLKEAGLPDGVFTVIQGAREAVEAILAHPDI
                     AAISFVGSTAIAETIYKGGTSFGKRVQALGGAKNHLVVMPDADLDDAVDALMGSAYGA
                     AGERCMAVSVAVAVGSAGDALVSKLAPRVRALKIAPGVDPEAEMGPLVTREHLAKVSG
                     YVDLGVKEGASLVVDGRGLKLQGYEQGFFIGGCLFDNVTTDMRIYQEEIFGPVLSVVR
                     APDIAAATRMINAHEYGNGVALFTNDGGTARDFTSQIQIGMVGINVPIPVPMSFHSFG
                     GWKHSLFGDHHIYGTEGVRFYTKYKAVTQRWTGGARKGPEFVMPTLGR"
     gene            complement(3733..>4215)
                     /locus_tag="VHX39_32410"
     CDS             complement(3733..>4215)
                     /locus_tag="VHX39_32410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995897.1"
                     /translation="NPIQIFVETPYGLYEVIDWVAQAQLIIAVGSARTIRLRQLNVRT
                     IFDLEKVVLCNHLRRRVHAALLGETPSRQDDSPSNPHQEYMAAHGPQSAEVIQLRTVR
                     PGHSQVELDLSKELDALVAMIRDDLHVQRLRQIWDVIADRLDERPGRDEEPRIRAAAE
                     "
BASE COUNT          866 a         1240 c         1311 g          798 t
ORIGIN      
        1 ttaccgcgac catgagttgg cccgccaatg tcgagggcat ccattttctg ctcgatgagg
       61 tttggccaac cctggtcgct gcccgcccat gcatcaacgc ggtgatcatc ggacgcaatc
      121 cgccggcatc gctggccgat aagatcaggc agcgcggcct gaacgtaacc ttaaccgggt
      181 ttgtcgatga catccgtccc tatgtggcgc aaagccacgt ctatgtgatc ccgctgtttg
      241 tcggcagcgg cacccgcatc aaggcgtttg aggcgatggc aatgggacgc ccagtggttt
      301 cgacatcact ggggatcgaa gggctcgatg tcacggacgg tgaacatttt ttgcgcgccg
      361 acgacgccat ttcgttctcg cgcgggatcc ttgcgctgct ggacgacgac gccttgcgtc
      421 atcgcgtcgc cggtgccgca cgccgattga tggagcaaag attttcctgg aaaaccgttg
      481 cggcccagtt tgaggcgatc tgtcaagagg cgctcgaacg gcggcgacag gcaaggcatc
      541 gcgtcaacag ccccggcgat tgaggcttcg accacgggtc gaaagccgcc gcaacgaccg
      601 gattaccggt cggcgactgg cacccgttta cgcgatcgga tttcgaggac actcaggaaa
      661 aacgcaccat aggcggtctg gaacgccagc aagatgcaag ttccggaggg gatcaccaga
      721 cgcatggcag actctggcga aagcacgcca aatgcggcct gactccaggc ggacagagcg
      781 acgaccgcaa gaccgatacc catcagcaac aacagcaacc cgaccagcag cccggattcg
      841 agcgtcagtg ctccggtcat gcgaagaaat cgctcatcgg gcggtaccag gccttctcgc
      901 atgccataca gccgcgcaaa caagtaaaac agcgccgaat ggaatccgac gaccaccgcg
      961 agcgacgcgt agaacagcgt atggatgtcc aaggtaatcc tgccgaccat tctgggctcc
     1021 ggcagcagcc aaaccatgct cgcaacgccc acagccatca atccgagacc cgggtagaga
     1081 aacaaccagc gcggactgaa cagcagcaag aaccgcaaat gtcgccagcc gtcccgccaa
     1141 ctccgcaaat gcggcgggcg agagcggccg tcaggcgcga gggttgtcgg cacctcggtg
     1201 attttcaggt tgtggatggt ggccttgacc accatctcgc tggcaaattc catacccgga
     1261 gcctgcaggt cgaggtccag aatagcggcg cgctcgaagc ctcggaggcc gcaatgaaag
     1321 tcgccgcacg ggctgcgaaa aaatacccgc ccgacggtcg tcagcaccgg gttgcccacg
     1381 taacgatgca acagcggcat cgcaccgggc ctgatgccgc ctttgaaccg attacccatg
     1441 accagggcat ggccttcgcg caatttagca acgaatgcat ccagctcgct gaaatcatag
     1501 ctgtcgtcag aatcacccat gatgacgtag cgaccgcgtg cggcgcggat gccaccaagc
     1561 agcgcgctgc cataaccttt cccgtcaatc gcctcgatgc gggcgccagc ggcaacagca
     1621 attgcctgcg aaccatcggt gctgccgtta tcggcgacca ggacctcgcc gcgtacgccg
     1681 gaacgttcca aataagaaaa tgccttgccg atgcaggtca cgagcgtctc cgcctcattc
     1741 aaacagggca tcaggatcgt aagttcacac ggggtgcaaa ccgtgtccga cagatttaac
     1801 gattggatca atgcatcgtt catgactgca acgcgcgcgg gtattgcctg gcagaccagc
     1861 ggcccggcat tctgatgtgc ctcggacaga gtgacatgaa attgaaacta tccgcatggc
     1921 ggctggctcg caattgattt ccggcatacc ggggcggact attgggagcc aaaggcaatg
     1981 ccgccgatat tcattgcgca ttcgcgaggc cggccatacg ccggggcgag cggaagcctt
     2041 accgtgaaaa acggaacgct gaagtttttc ctatacagcc gtgccaggct gaagatgctc
     2101 cggcacgccc cctacccgtc cgacgcgttt cggcctaagt ccagcctccg gtgcgacttc
     2161 ggaggatcgg cctatgcaag aaatcggaca ttttatcggt ggtaaaccgg ctgccggtac
     2221 cagcggcaaa tttggtgacg tctacaatcc ggcagccggc gaggtcaccg cgcgtgtggc
     2281 cctggccagc acggccgagg tcaatgccgc cgttgcctcc gccgctgccg cctggccttc
     2341 ctgggctgcc accccgccgc tccgccgcgc ccgcgtcatg ttcaaattca aggagctgct
     2401 cgagcgcgac cgcaaggaac tctccgccat catcaccggc gaacatggca aggtcctgtc
     2461 cgacgccgat ggcgaggtgc agcggggcct cgaggtggtt gagttcgcct gcggcatccc
     2521 gcatttgctg aaaggcgaat acactgagat ggtcggcacc ggcatcgatg cctggtcgat
     2581 ccggcaacct ctgggcgtgg tcgccggcat cacgccgttc aactttccgc tgatggtgcc
     2641 gctgtggatg ctgccggtgg cgctcgcctg cggcaattgt ttcattctga agccgtccga
     2701 gaaggaccct tcggtgtcgc tgaaggtggc tgcgctgctg aaggaagcgg gactgccgga
     2761 tggcgtgttc accgtgatcc agggcgcgcg ggaggcggtg gaagccatcc tggcgcaccc
     2821 cgacattgcc gcgatcagct ttgtgggttc aaccgcgatt gcggagacga tctacaaagg
     2881 cggcacgtca ttcgggaagc gcgtgcaggc attgggcggc gcgaagaacc acctggtggt
     2941 gatgccggac gccgacctgg acgatgcggt cgatgctctg atgggttcgg cttacggtgc
     3001 cgccggagag cgttgcatgg ccgtatcggt cgcagtggcg gtcggctcgg ccggcgacgc
     3061 gctggtgtcg aaactggcgc ctcgggtgcg ggcattgaag attgcaccgg gggtggatcc
     3121 ggaggcggag atggggccgc tggtgacccg cgagcatctg gcaaaagtct ccggatatgt
     3181 cgatctggga gtgaaggagg gtgcttcgct tgttgtcgac ggaagggggt tgaaactgca
     3241 aggctatgag caagggtttt tcatcggcgg atgtctgttc gataacgtga caacggacat
     3301 gcggatctat caggaagaga tctttggtcc ggtgctgtct gttgtgcgtg cccctgacat
     3361 tgcggcagcg acccggatga tcaacgcgca cgaatacggc aacggtgtcg ctctgttcac
     3421 caacgacggc gggactgcgc gggatttcac cagccagatc cagatcggca tggtcgggat
     3481 caacgtaccg atcccggtgc cgatgtcgtt ccattcgttc ggcggttgga agcattcgct
     3541 tttcggggat caccacatct atgggacaga aggtgtgcgg ttctatacga agtacaaggc
     3601 cgtgactcag cgctggacgg gtggcgcgcg gaaagggccg gaattcgtga tgccgacgtt
     3661 ggggcggtag gcgcgatcgg gccgatcgca ggcaatgtct cgaatttgcg cgtaacgctg
     3721 cgttcgtaag gattattctg cagccgctct aatgcgcggt tcttcatccc ttcctgggcg
     3781 ctcatcaagg cggtcggcga tgacgtccca gatttggcgt aatcgctgca cgtgaagatc
     3841 gtcgcgaatc atggcaacca aggcgtccaa ctccttcgag agatccaatt cgacctggct
     3901 atggcctggc ctcacggtcc ttagttggat gacttcggcg gattgcggcc catgtgccgc
     3961 catatactcc tggtgaggat ttgatgggct gtcatcctgc ctactgggag tctcgccgag
     4021 gagcgccgca tgcacgcgac gacgcaaatg gttgcaaagg acgacctttt caagatcgaa
     4081 aattgtgcgg acattcaact gccttagtcg gatcgttcgt gccgagccaa ctgcgataat
     4141 caactgggcc tgagcaaccc aatcgatgac ttcatagagg ccatacggtg tctcaacgaa
     4201 tatctggatg ggatt
//
LOCUS       DATAVD010001690         2941 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3136318, whole genome shotgun sequence.
ACCESSION   DATAVD010001690 DATAVD010000000
VERSION     DATAVD010001690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2941
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3136318"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(301..1659)
                     /locus_tag="VHX39_32415"
     CDS             complement(301..1659)
                     /locus_tag="VHX39_32415"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3995898.1"
                     /translation="MRLPRPLRTSSFRLTVLYAAMFSVSGLVVFAIVAWLVSSFMVEQ
                     LDATVANELAEVQADAGSQDTEVLKRVITGLTVNSPGIYYLLQAPDRRVIAGNMTAIE
                     PKPGLRSLEWTHQAPERRSIGGIRGRGVLLPDGAYLFVGISDYQLGEVREVILRTTLL
                     GLGVTIVLAVAGGLAMSYGVLRRVEAVSRASRAIMAGDLTQRMTLRGTDDEFDHLSSS
                     LNAMLERIQDLMLGLQQVSSDIAHDLRTPLTRLRQRLELARRREVTVDGLHVAVDGAI
                     DNVDAILETFSALLRIAQIEAGTRRSGFQPVDLSTLLSGLIEAYQPVAEEREQSLHAQ
                     IAPDLFVVGDRELLTQMFANLIDNAVVHSAVGAEIAVEAVSGAGGIRVKVMDNGSGIP
                     PQYRQAVLRRFYRLDRSRSTPGSGLGLSLVSAVSSLHDATLALEDNDPGLRCVLVFPT
                     RH"
     gene            complement(1646..2320)
                     /locus_tag="VHX39_32420"
     CDS             complement(1646..2320)
                     /locus_tag="VHX39_32420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3995899.1"
                     /translation="MRILLIEDDPETAEYVVAGLQSEAHELEVAFDGRTGLVRSASET
                     WDLLIVDRMLPGLDGLAVVRTLRASGIATPVLFLTTMGGIDDRVTGLNAGADDYLIKP
                     FAFAELVARVAALGRRPQRAAPETVLRVADLEIDLLTRIVRRGGEEVALQPREYELLE
                     YLMKHAGQVVTRTMLLENVWGFHFDPRTSLVESHISRLRGKIDRGRPELISTVRGSGY
                     CLRAPA"
     gene            2454..>2941
                     /locus_tag="VHX39_32425"
     CDS             2454..>2941
                     /locus_tag="VHX39_32425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995900.1"
                     /translation="MLLRLLIPSALGLALAGCGAPADLPLPAQPNLADDLGSLHHDGI
                     NVAAPLTVTQVALLAVQNDPDLRAVRAQHGLAQAQVLQVGLLPNPQFTGAFLPLVAGV
                     GSTPAYNAGISEDIRALITLSSSRKAARASAGQVDAQILWQEWQVIGQARLLAVDIIE
                     AER"
BASE COUNT          536 a          999 c          883 g          523 t
ORIGIN      
        1 cacgctaacg ttttcgggtg tggtgcgagt atggctcggt gcgttggcgc ggcggcgatg
       61 ctgccggaga atgaccataa ggacttggcc attcgggcgt tggcacgatt gacgacgatc
      121 agtgatttgt cggcccgaca ccgcgtgagt cgcaagttcg tttaccagca agcgcacaag
      181 gccggtacgg cgttgggtga ggttttctta tctgggtacg ccagaagacg acgtgctgtc
      241 cgcctcgttc tcaatgcgcg cccatcggcc ggataagtcc gaaaaagcaa tctctcaccg
      301 tcagtgccgc gtcgggaaca cgagcacaca gcgcagcccg ggatcgttgt cctcaagtgc
      361 aagtgtggcg tcatgaaggc tgctgaccgc gctcaccaag ctcaatccca acccgctgcc
      421 cggtgtcgac cggcttcggt ccagccggta gaatcggcgc agcactgcct gacgatactg
      481 tggcggaatg ccagaaccgt tatccatgac cttgacccga atgcccccag ccccggacac
      541 cgcttcgaca gctatctccg cgccaacggc cgaatgcacc actgcattgt cgatcaggtt
      601 ggcgaacatc tgcgtcagca attctcgatc cccgaccaca aacaggtccg gcgcaatctg
      661 agcgtgcagt gactgttccc gctcctcggc gaccggctga taggcctcga taagtccact
      721 cagcaacgtg ctcaggtcaa ccggttggaa cccggaccgt cgcgtgccgg cctcgatctg
      781 cgcgatccgc agtaaagcgc taaacgtttc cagaatggcg tcgacgttgt cgatcgctcc
      841 atcaacggca acatgcaacc cgtcgacggt gacctcccgc cggcgcgcca gttccaggcg
      901 ctggcgcaac cgtgtcagtg gtgtccgcag atcgtgcgcg atgtcgctcg acacctgttg
      961 caaacccagc atcaagtcct ggatccgctc gagcatcgca ttgaggctgc tgctgaggtg
     1021 atcgaattcg tcatcggtcc cgcgcagcgt catccgttgg gtcaggtcgc cagccatgat
     1081 cgcccggctc gcccggctca ccgcctccac ccggcgcagc acgccgtagc tcatggcaag
     1141 cccgccggcg acggccagca cgatcgtcac gcccagtccg agcagtgtgg tgcgcaggat
     1201 gacctcccgc acctcaccga gttggtagtc actgatgcca acgaacaaat acgcgccgtc
     1261 cggcaacaga acgccacgac cgcgaatgcc gccaatcgac cgccgttccg gcgcttgatg
     1321 cgtccattca agcgagcgca ggccaggctt tggctctatt gccgtcatat tgccggcgat
     1381 cacccgcctg tcgggcgcct gcagcaggta gtagatgccg ggcgagttca cggtcagccc
     1441 ggtgatcacc cgcttcagca cctcggtgtc ctggctgcca gcgtcagcct gaacctccgc
     1501 cagctcattg gccaccgtcg cgtccaactg ctcgaccatg aagctactga ccagccacgc
     1561 aacgatggcg aacaccacga gcccagaaac gctgaacatg gccgcataga gcaccgtcag
     1621 ccggaagctc gaggtgcgaa gcggcctagg caggcgcacg gaggcaatac ccgctgccgc
     1681 gcacggtgct gatcagttcg ggccggccgc gatcgatctt gccgcgcaga cggctgatat
     1741 ggctttcgac cagactggta cggggatcga agtgaaagcc ccagacgttt tccagcagca
     1801 tggtccgggt taccacctga ccggcgtgct tcatcagata ttcaagcagc tcgtattccc
     1861 gcggctgcaa cgcgacctcc tcaccacctc ggcgaacgat gcgggtcaac aggtcgatct
     1921 ccagatccgc gacccgcaac acggtctccg gtgcggcacg ctgcgggcga cggcccagcg
     1981 cagcgaccct ggcaaccagt tcggcaaagg cgaagggctt gatcaggtag tcgtcggcac
     2041 cggcgttcaa gccggtcacc cgatcgtcga tcccgcccat cgtggtcaag aacagcaccg
     2101 gggtcgcgat gccgctggcc cgcagggtgc gcaccacggc cagtccgtcc aggccgggca
     2161 gcatccggtc gacgatcagc aagtcccacg tctccgatgc cgatcgcacc agaccggtcc
     2221 ggccgtcaaa cgcgacctcc aattcgtgcg cttcgctctg caatcccgcg acgacgtatt
     2281 ccgccgtttc ggggtcgtct tcgatcaaca ggatgcgcac tgggctttcc tcatgtgcct
     2341 tcatgccaca gcggaagccg gcccggcgcc aacttgtcga ttgcgaaggt tcccgccagt
     2401 gtttgacaag gtgtctcctg ccatgtctct ggcatgcagc cgttcgcccg tccatgctcc
     2461 tccgcctgtt gatcccgtcc gcgctcggtt tggcgctggc cgggtgcggc gcaccggctg
     2521 atctgccgtt gccggcacag ccgaacctgg cggacgatct tggcagcctg catcatgatg
     2581 ggatcaacgt cgcggcaccg ctcacggtga cacaagtggc gctgctggcc gtgcagaacg
     2641 atccggactt gcgcgcggtc cgtgcgcagc acgggctggc ccaggcgcag gtgcttcagg
     2701 tcggcctgtt gcccaatccg caattcaccg gcgccttcct gccgctggtc gccggcgttg
     2761 gcagtactcc tgcctataac gccggcatca gcgaggacat ccgcgcgctg atcaccttgt
     2821 ccagctcgcg taaggcggca cgggcgagcg ccggccaggt cgacgcacaa atcctgtggc
     2881 aggaatggca ggtgatcggt caggcccggc tgctggccgt cgacatcatc gaggccgaac
     2941 g
//
LOCUS       DATAVD010001691         1881 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_533688, whole genome shotgun sequence.
ACCESSION   DATAVD010001691 DATAVD010000000
VERSION     DATAVD010001691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_533688"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            95..685
                     /locus_tag="VHX39_32430"
     CDS             95..685
                     /locus_tag="VHX39_32430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995901.1"
                     /translation="MSVTAVQASGVSQPAAAPEKAAASHGFSFHALLSALNPLQYLPV
                     VGTIYRAATGDVIPDAVRYAGSMLASGLLGGPIGLLSNVALIIGEKVTGIDPEKIIAD
                     QFHKAPPAVATVTSPIATPAPPPVASASGATQLALSPQQLAAYGVHVNRSGTLQMGDI
                     QGADVLNTIELARLDKAASAYAANQPTPAAPATRGL"
     gene            1114..1335
                     /locus_tag="VHX39_32435"
     CDS             1114..1335
                     /locus_tag="VHX39_32435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995902.1"
                     /translation="MAGLALYTVGSIGCAVSPGPSSFYACRALAAFGGAASIVIPRTL
                     VFDLESGPDGRMVPPARRACLTLTRQRSK"
     gene            1501..>1881
                     /locus_tag="VHX39_32440"
     CDS             1501..>1881
                     /locus_tag="VHX39_32440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995903.1"
                     /translation="MSHQIFDYYQVNDQAANQIILLNVLYARDGAPLHFSELSQVRGQ
                     LTASASAATTFPYSAINHATMVPRNLATIGASVSTSPSFDIASLDTKDFTAGVMAPIT
                     PDAVRFFLNEGIDYRLVLLLLASGI"
BASE COUNT          342 a          581 c          576 g          382 t
ORIGIN      
        1 gccggccggt tcgagggggc cgccgtactg gtgccctgac cgcctggcac ggcggttgct
       61 gcgtcaccgt tcgaccagca accggtaaaa cctcatgagt gtgacggcag tccaggccag
      121 tggcgtcagc cagcccgcag cagcgccgga aaaggctgct gccagccatg gcttcagctt
      181 ccacgctttg ctgtccgccc tgaacccact gcaatattta ccggtcgtgg gcacaatcta
      241 ccgagccgcg actggcgacg taatccccga tgcggtgcgg tacgccggct cgatgcttgc
      301 cagcgggctg cttggcggcc caatcggact gctgtcgaac gtcgcgctga tcattggaga
      361 aaaggtcacc gggatcgatc cggagaagat tattgcggat cagttccaca aagcgccgcc
      421 ggccgtggcc accgtaacgt cgcccattgc gacgcccgca ccacctccgg tggcatctgc
      481 gtctggagca acgcagcttg cgctctcgcc gcagcagctt gcggcctatg gcgttcacgt
      541 gaaccgctcg ggcacgctgc aaatgggcga tatccagggc gctgatgtgc tcaacacgat
      601 cgagcttgcc cggctggata aggcggcttc cgcctatgcg gcaaaccagc ccacgccagc
      661 ggcccctgca acgcggggtc tgtgacgacg cgtgctcagt cggctggaaa cgcggccgaa
      721 actgcataac tgaggaacca tcggggcgcg gttgacattc gcgaactggg aggcccgact
      781 aaaagtcatc ccgcgtcgtt gaggaagagg atgtgtttgg atcgcgccac cttgtggcaa
      841 cgcccggcgt atcccttgga gaatgctcat gacccgagtg tcgcccttcc actgggtttt
      901 tgagacacgg aagcctccga ggatgcggat ttaccacaac aacgacaact gctccctggg
      961 tcgcgccatc ccggaccgag agcgtgtcga aggcaccgga aatcacccgt tttgcctgga
     1021 gtgcgaccgg ctgacccggc aggagcccaa tcgctggatt tgacgctccc gtacggtccg
     1081 gtatcggatt ggaacggcgg acgccctgcg cttatggcgg gcctggcact gtataccgtt
     1141 ggctcgatcg gttgtgcggt ttcgccggga ccgtcgagtt tttacgcatg ccgggcgctt
     1201 gcggcattcg ggggagcagc gtccatcgtc attccgcgca ccctggtgtt cgacctggag
     1261 agcggccctg acggccgcat ggtgccgccc gcgcggcggg cttgtctcac cctgacccgc
     1321 caaagatcga aatagcatca attttgcttc ggtcaggccg gaacgagttg acatggttac
     1381 cggtgagtct accctgggcc tgggttggta acatcatgaa aggacagagc cctgcgtgca
     1441 attttgcgcc ttctggtcct catcgtcctg ccgctgacgg catgttcgtt gggcgatgca
     1501 atgagccatc agatcttcga ttattatcag gtcaacgatc aggccgcgaa ccaaatcatt
     1561 ctgttgaacg ttctgtacgc ccgggatggc gctccactgc atttcagcga gctctcacag
     1621 gttcgcggcc agcttacggc ttcggcttcg gcggcgacaa cgtttccgta cagtgcgatc
     1681 aaccacgcga cgatggtccc gcgtaacctt gccacaatcg gagcatcggt cagcacatcg
     1741 cccagtttcg atattgcgag cctggatacg aaggatttca cggcgggcgt gatggcgccg
     1801 atcacaccgg atgcggttcg attcttcctc aatgaaggta tcgactatcg cctggttttg
     1861 ctgctgttgg cttccggtat c
//
LOCUS       DATAVD010001692         1687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3136392, whole genome shotgun sequence.
ACCESSION   DATAVD010001692 DATAVD010000000
VERSION     DATAVD010001692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3136392"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..754
                     /locus_tag="VHX39_32445"
     CDS             <1..754
                     /locus_tag="VHX39_32445"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3995904.1"
                     /translation="QDYHRRVVRWEHNGSMTVIADQFDGKPLNSPNDLVAHPDGSIWF
                     TDPPYGDRLSEGRPDDAGGPANEAGKFDPRTGAETVVPAVKRALPTAVYRWDPSGKLE
                     VVVTEADLADPNGICFAPDYKTLYVISTGKGPGDSGEGGDRSIYAFEVNGTKLSGKRV
                     FTDMKIEGVQCGPDGMRADSLGNMWCSSNARLGYAGVLVVSPAGKTIGLIRLPEVCAN
                     LSFGGPKHDHLFMTASQSLYLLQVGVQGAAPG"
     gene            complement(756..1436)
                     /locus_tag="VHX39_32450"
     CDS             complement(756..1436)
                     /locus_tag="VHX39_32450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995905.1"
                     /translation="MGIRMLAGEAVVAIWNGIEPDARDQFYDWHVNEHMPERVGIPGF
                     RRGRRCIAADTATHPEFFTLYEADTMPVLQGSDYANRLNDPTPATKVTTAKFTDTFRA
                     LSRVVVSHGAGMGGALLTIRFDCDAQHLIAVRAMVRAAAQAHRVTGAHLCQADTAASL
                     IRTTETKDRTDIQPPPSCFILVEATGPEALTDILLDRALLGAGATGPFVRGTYRLEYV
                     RLKTAFAS"
     gene            complement(1454..>1687)
                     /locus_tag="VHX39_32455"
     CDS             complement(1454..>1687)
                     /locus_tag="VHX39_32455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995906.1"
                     /translation="RVVTDRRHALRDQKFEKRMGLALSGRDNKVFRDDLLRWCNLRND
                     AAHGERLTKYDINAVLERADQLDVMLREQPESP"
BASE COUNT          302 a          482 c          567 g          336 t
ORIGIN      
        1 gcaggattac catcgtcgtg tggtgcgttg ggaacacaat ggctcgatga cggtgatcgc
       61 cgatcagttc gacggcaagc cgcttaattc tcccaatgat ctggttgcgc atccggatgg
      121 atcgatctgg ttcaccgatc ctccatatgg cgaccgcctg tcggagggtc ggccggacga
      181 tgctggcggt ccggccaacg aagccggcaa attcgatccg cgcaccggtg ccgaaaccgt
      241 cgtccccgca gtgaagcgcg cgttgccgac cgcggtgtat cgttgggatc cgtccggcaa
      301 gctggaggtc gttgtcacgg aagcggatct tgccgacccg aacgggattt gtttcgctcc
      361 cgactacaag acattgtatg tgatcagcac aggcaaaggg ccaggcgaca gcggcgaggg
      421 cggcgaccga tcgatctacg cgttcgaggt gaacggcacg aagctcagtg gtaaacgggt
      481 gtttaccgat atgaagatcg agggcgtgca gtgcggtccc gacggcatgc gcgccgattc
      541 actgggcaat atgtggtgca gttcgaatgc gcgtctgggc tatgcggggg tgctggtggt
      601 ttctccggcg ggcaagacga tcggcctgat ccggctgccg gaggtgtgcg caaatctgtc
      661 gtttggcggg cccaagcacg accatttgtt catgacggcc tcgcaatcgc tgtatctgct
      721 gcaggtcggc gtgcaaggcg ccgcgccggg gtagttcagg aggcgaaggc ggtcttgagg
      781 cgaacgtatt ccagccgata cgtgccgcga acgaacggcc cggtcgcgcc ggcgccgagc
      841 agcgctcggt cgagcaggat gtcggtcagc gcctcgggac cggtcgcctc gaccaggatg
      901 aaacaggacg gcggcggctg gatgtcggtg cggtcttttg tttctgtggt gcggatcaga
      961 gatgcggcag tgtcggcctg gcacagatgg gcgccggtca cgcgatgggc ctgcgcggcg
     1021 gcacgcacca tggcgcggac ggcgatcagg tgctgcgcgt cgcagtcgaa acggatggtc
     1081 agcagcgcgc cgcccatgcc ggcaccgtgg ctgaccacga cgcgggagag ggcgcgaaac
     1141 gtgtcggtga attttgctgt cgtgaccttg gtcgctgggg tcggatcgtt cagccggttg
     1201 gcatagtcgg agccttgcag gaccggcatg gtatcggctt cgtagagcgt gaagaactcc
     1261 ggatgtgtcg cggtgtcggc ggcgatgcag cggcggccgc gacggaagcc agggatgccg
     1321 acccgttccg gcatgtgttc gttgacgtgc cagtcgtaga attggtctcg cgcgtctggt
     1381 tcgatgccgt tccagattgc gaccacggct tcacctgcca gcattcgaat ccccatttgc
     1441 tttcaacatg agattacggg ctctcgggct gctctctgag catcacatcg agctgatcgg
     1501 cccgctcgag caccgcattg atatcgtatt tcgtgagacg ttcgccatgt gcggcatcat
     1561 tcctcaaatt gcaccaacgc aacaaatcat cacgaaacac cttgttatcg cgacccgaca
     1621 acgccaggcc cattcgcttc tcgaatttct gatcgcgtaa ggcatgccgc cgatccgtta
     1681 caacccg
//
LOCUS       DATAVD010001693         3197 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2023163, whole genome shotgun sequence.
ACCESSION   DATAVD010001693 DATAVD010000000
VERSION     DATAVD010001693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3197
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2023163"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..404)
                     /locus_tag="VHX39_32460"
     CDS             complement(<1..404)
                     /locus_tag="VHX39_32460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995907.1"
                     /translation="MRKLSWLAAILAFAPGVATAAPQIKVPACDTITVWAAKVNTNSY
                     NVAPRITLPKAFQDAEVVPIFGLPVMAWSQDDIQAASQAMVACYQDAGKRHNQASAGA
                     LANANRALLGLLPRTNAALQKAGNDSDTVRKEL"
     gene            complement(592..930)
                     /locus_tag="VHX39_32465"
     CDS             complement(592..930)
                     /locus_tag="VHX39_32465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995908.1"
                     /translation="MRPFGTLIEKAIKFREPSIPGPRMDRVVPRTENRLDEGINELFE
                     YACITNDLDAAGDLVALIEMWDARRAYKDHEQRRAASIQLKRMRGELDRRHIMRGTRP
                     APTRRPPAGA"
     gene            complement(1268..1438)
                     /locus_tag="VHX39_32470"
     CDS             complement(1268..1438)
                     /locus_tag="VHX39_32470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEX3995909.1"
                     /translation="MTQLVTAWLAFKSDRRGVTALEYGLIAGVIVAVITLGFTSLADA
                     LSSQFTSIGDGL"
     gene            complement(1774..2130)
                     /locus_tag="VHX39_32475"
     CDS             complement(1774..2130)
                     /locus_tag="VHX39_32475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995910.1"
                     /translation="MITALVLYRLPEHIDREACRQHFLKIAPDFLGVPGFIRKQFIHD
                     VNGGMAGGSYIWENLAAAKAFYNGPWLEGIRTRYECEPQVTYFETFAIADQATHYAGP
                     PPGPVVAALAEPERVG"
     gene            complement(2138..>3197)
                     /locus_tag="VHX39_32480"
     CDS             complement(2138..>3197)
                     /locus_tag="VHX39_32480"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3995911.1"
                     /translation="LMGIAMGLKDAGAGFIEMTSDWNTPDPATEFAMVRRIMQASGRP
                     LVFSLNQRHDRTEAWKDLLALSTQAAADGLPIRCVAPPRPIGALLGLTGSQNPFAGTR
                     TYRSIAHLPLEQRVAAMRDPEVRAKILADDPKEFNTWSLLNRIGYARMFRFTNPLNYT
                     PAKEDSITAIAAREGRTPEAVAYDMLVDDDGKGFIFTALVNYANYDLEAVKTMYAQQH
                     VIPGLSDGGAHVAFISDASFPTFLFSYWGRDRDDGRMPIPDLVRRQTREPARFAGLLD
                     RGVLAPGMKADINVIDFPNLALERPEMVVDLPAGGRRLMQKARGYAATVKSGQITYRN
                     GVATGALPAGLVRGPQGG"
BASE COUNT          632 a          981 c          922 g          662 t
ORIGIN      
        1 agttccttcc tgaccgtatc gctatcgttc ccggccttct gcaatgccgc attggtgcgc
       61 ggcagcaaac ccagcagcgc acgattggca ttggcgagtg caccggcaga ggcctggttg
      121 tgccgtttgc cggcgtcctg gtaacaggcg accattgcct ggctggcggc ctggatatcg
      181 tcctgactcc aggccattac gggaaggccg aatatcggca ccacctcagc atcctggaac
      241 gctttcggca aagtaatccg gggtgcgacg ttgtaactgt tagtgttgac cttggcagcc
      301 cagacggtga tggtatcgca cgccggcacc ttgatctgcg gcgccgccgt tgcaacgccc
      361 ggtgcgaacg ccaaaatagc agcgagccac gacaattttc gcataatccc ctccggacac
      421 gttgacgccg cccgtcaccg acacgcacgg ccgaggcgtt ctcatttcaa tcaacagctt
      481 gacgcatcgc atggtccggt caagctgcgc gataacagaa cgttacggaa cggaaccgac
      541 tttgtgatgc ccttttgggg ttcgcagatt gtcggtcggt gtgtggcggc gtcaggcacc
      601 cgcaggcggt cgacgggtag gtgccggacg ggtgcctcgc atgatgtgcc gtcgatccag
      661 ttcgccacgc atgcgcttca attgaattga ggccgcccgc cgttgttcgt ggtccttgta
      721 cgcgcggcgc gcgtcccaca tttcgatcag tgccacgaga tcgcctgccg catccaggtc
      781 gttggtgatg cacgcatatt cgaatagctc gttgatgccc tcgtcgagcc ggttctcggt
      841 gcgcggaaca acacgatcca tgcgaggacc gggaattgac ggttcacgga atttaatggc
      901 tttttcgatt aaagtgccga agggtcgcat caccaatctc ctgaacagag gcccccagga
      961 gtattacggt accgaatgta ttgcgacctg ataacagttt gcccagtttg gaaacaattt
     1021 ggtacaaatt ttgtgtgtgc agtcagccac gatgctgatt gcgcggttca tcctggatat
     1081 tctttgtggc ggcgaatgcg ccgtcgtgga agtcgtgatt cctgcaggtt tactggattg
     1141 atggtgtggc ggatcgccga tactgcaacc cggaatcaga atgcgctctg aatcggccca
     1201 aaatgtgcac gtcgaaacca gactcagccg ggaagaccat accagctgag tctgagtctc
     1261 attacgctca gaggccgtcg ccgattgagg tgaactggct ggaaagcgca tcggccaggc
     1321 tggtgaaacc aagcgtgatt acggcgacga tcaccccggc gatcaggccg tactcaagag
     1381 cggtcacacc tcggcggtcg gatttgaagg ctagccaggc ggtgacgagt tgggtcatta
     1441 tttgtctccg ttgcggttaa ctcttcgaac tcacacgtta agagcgctgc ttagattgaa
     1501 ttctctctta aatgtaagct accagcaatg aatggcatga atccggttgc agattggttt
     1561 ctatccactg ctgtcccgca tcggcggccc agggcaggcc tcacttttcg gcctggtttc
     1621 aaccgatggt tgcagatcgg ccgccacgca ttccgactgc gcgttcgcta aaggtccgat
     1681 tgccgataat atgccaaagc atcaggtgat gccgggagtg gcgcaactca atgcgtcact
     1741 ccgcgtcctc cgccgcagcg aagtgcgtcc ctgttaaccg acccgctcgg gttccgccaa
     1801 agcggcaacg accggtccag gcggcgggcc ggcgtaatgt gtcgcctggt ctgcaatggc
     1861 gaaagtttcg aaataggtga cctgaggctc gcactcgtaa cgcgtacgaa tcccctccag
     1921 ccaagggcca ttatagaatg ccttcgccgc cgcgaggttc tcccagatat acgaaccccc
     1981 ggccatgccg ccattcacgt cgtggatgaa ctgcttgcgg atgaaacccg gcacacccag
     2041 aaaatccggc gcaatcttca ggaagtgttg acggcaggcc tcgcgatcaa tgtgctccgg
     2101 caagcgatat aacacgagtg cggtgatcat cgttttgtca tcccccttgc ggacctctga
     2161 ccagcccagc gggcagggcc ccggtggcca cgccgttacg gtaggtgatc tgcccagatt
     2221 tgactgttgc tgcgtagccg cgcgccttct gcatcaaccg ccgcccgccc gcgggcaggt
     2281 cgacgaccat ttccggccgc tccagcgcca ggttggggaa atcgatcacg ttgatgtcgg
     2341 ccttcatgcc aggcgccagc acgccgcggt cgagcagtcc ggcgaaccgg gccggctccc
     2401 gcgtttgccg ccgcacgaga tcggggatcg gcatccggcc atcgtcgcgg tcccgccccc
     2461 agtagctgaa caggaacgtc gggaatgatg catccgaaat aaacgccacg tgcgcaccgc
     2521 catcgctcag acccggaatg acatgctgtt gggcgtacat cgtcttcacg gcttccaggt
     2581 cgtagttcgc gtagttcacc agcgccgtga agatgaaacc cttgccgtca tcgtcgacca
     2641 acatatcgta ggcgacggcc tccggcgtgc ggccttcgcg ggccgcgatt gccgtgatcg
     2701 aatcttcttt cgcaggcgta taattcagcg gattggtgaa gcggaacatc cgcgcgtagc
     2761 cgatccgatt aagcaatgac cacgtgttga actccttcgg atcgtcggcc agaatttttg
     2821 ctcgcacttc cggatcacgc atcgcggcaa cgcgctgctc caacggcaga tgagcgatcg
     2881 agcgataggt ccgcgtcccg gcgaacgggt tttggctgcc cgtcaaaccc aacaacgcac
     2941 cgatcggccg aggcggtgcc acacacctga tcggcagccc atccgcagca gcctgcgtcg
     3001 acaacgccag caggtccttc cacgcctccg tccggtcgtg ccgctggttc aacgaaaaca
     3061 ccaatggccg tccgctcgcc tgcatgatcc gtcgcaccat ggcgaattcg gtggcaggat
     3121 ctggggtatt ccaatccgag gtcatctcga tgaaccccgc ccccgcatcc ttcaatccca
     3181 tcgcgatccc catcaac
//
LOCUS       DATAVD010001694         3888 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_346542, whole genome shotgun sequence.
ACCESSION   DATAVD010001694 DATAVD010000000
VERSION     DATAVD010001694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3888
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346542"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            331..3090
                     /locus_tag="VHX39_32485"
     CDS             331..3090
                     /locus_tag="VHX39_32485"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX3995912.1"
                     /translation="MRVLNLKHSLLVGSSLAAFAVLAGPALAQQADQSAETVIVTGTR
                     VQGMTAADSAAPITVLGTDALTHGSGSADLRQALGQTIPSFTAQQFGSDTANLTLSAA
                     LDGLSPNDTLVLINGKRRHYSGNLHVDGGNFASGSSAPDISLIPEAAIDHVEVLQDGA
                     AAQYGTDAIAGVINIILKNKSSGGSLSATAGDYYDRGGVPTDNGLKAGGTKYDVSYNM
                     GLPLFDKGFVNFTIDKQYGNFTQTGGADYRVAGPTGTGLATGPVGGVPLSVLQAMPGY
                     PRINPINGNPEYQLTMAEVNSEYDFSDNFGIYAFGTIGHKFGKSYENNRMPSQIEATP
                     GSSQPCSAANPDGYDQGSSTANGLTPSCAGPFALTTANGASAVPGTAGAGLNPGTGQV
                     ISSGNSGTYTAPGELIMYPEGFRPMEVLKEDDYQYNVGEKFNLFGWAVDADVGYGKDI
                     DNIYTWNSGNRSLFIDTHTSPSNFYDGSFTASQLTGTIDATHAFNVGLASPLTVAVGV
                     EARQDEFAIGAGDADSYYKEGAQSFPGFTPSAAGDHSRKNYAGYIDLAVAPIEALQID
                     VAGRAEHYTDFGDTQIGKITARYDFNPQWAIRGTISTGFRAPTLAEEFYTAVNVSPNS
                     ATVQLPADSAAAKVLGLPNLVPEVSTSYSAGIVAHPLDDLSVTVDAYSIAIGDRITSS
                     STVNSAGGVINTPLVNQAIAADGVVLDPTATQNGATAFLNGISTLTQGVDVTANYPTD
                     LGVYGLVDWTFAANYNQTAVSRVAPTPAVLTASNAGATFFYPDTLYDFTHSAPTTKIG
                     LTANWSLDEFGITLRETLYGPMHGYTSPEGCTTLDTCVYIPQAAVGLTDLEVRYNVTD
                     QLQFALGANNLFNIRPDAMPYDQNAYGAGVGAPADGGNVIGNPIPGAFDPNGGYYYGR
                     ITFNF"
     gene            3291..>3888
                     /locus_tag="VHX39_32490"
     CDS             3291..>3888
                     /locus_tag="VHX39_32490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995913.1"
                     /translation="MLAAAAVLALAEPSLVAQAQTGGQNVDWPLYLGDASGSKFKPLD
                     QINASNFSNLEVAWRFKTDHMGNRPEYKLEGTPIEVNGVVYATAGSRRAVVALDAVTG
                     ELLWVHGEKEGARGAAAPRQLSGRGPAYWSDGRDARILYVTPGYQLICLDARTGQRIA
                     GFGNNGAVDLKADDDQKIQPDLTTGEIGWQSAPTGVGDK"
BASE COUNT          774 a         1265 c         1122 g          727 t
ORIGIN      
        1 cgaattcctg ctggagatcg acgcggtcgc ggcccgtatt tgaacctaaa aaccactacc
       61 tttagccagt cacatacgcc attttggcta atatctttca tcaaatttat aatatgtgag
      121 tcttcataat ggctgcataa atagcactag ataatactat agtattagtt tacatatctg
      181 tcgtactaag ccaacgtgag ttgaagcggg caaccaatag cccggcacga gccgtgtacg
      241 gcaaggggat tccatttccg tgggtcatgc ccgagccgga tttttcccga tgtctcaagg
      301 acatcgcatc cgatttagca ggggatccct atgcgcgtat tgaatctcaa acactctctt
      361 ctggttggtt cgtctctcgc cgcttttgcg gtgctggccg gccccgccct ggcccaacaa
      421 gccgaccaat ctgccgaaac cgtaatcgtc accggtaccc gcgtgcaggg catgacggcc
      481 gccgactcgg ctgcgcccat caccgtcttg ggcaccgacg ccttgaccca tggcagcggc
      541 tcggccgacc tgcgccaggc gctgggccag accatcccct ccttcaccgc ccagcaattc
      601 ggcagcgaca ccgcgaacct cacgctctcg gcggcactgg atggcctttc gcccaatgac
      661 acactggttc tgatcaacgg caagcgccgt cactattccg gcaacctgca cgtggatggc
      721 ggcaatttcg ccagcggcag ctcggcgccc gatatctcgc tgatccccga agctgcgatc
      781 gatcatgtcg aagtgctgca ggacggcgcg gccgcccagt acggcaccga tgccatcgcc
      841 ggcgttatca acatcatcct caagaacaaa tcctcgggcg gctcactgtc ggccacggcg
      901 ggcgattatt acgaccgcgg cggcgtccct accgacaacg gcctgaaagc cggcggcacc
      961 aagtatgacg tgtcatacaa tatgggcctg cccctgttcg acaaaggctt cgtcaatttc
     1021 accatcgaca agcagtacgg caatttcacc cagaccggcg gcgccgacta tcgtgttgcc
     1081 ggtcccacgg gcacgggcct tgcgaccggt ccggttggcg gcgtgcccct gtcggtgctg
     1141 caggcgatgc cgggctatcc gcgcatcaac cccatcaacg gcaatcccga atatcagctg
     1201 accatggcgg aagtgaattc cgaatatgac ttcagcgaca atttcggcat ctatgccttc
     1261 ggcaccatcg gtcacaaatt cggcaagtcg tacgaaaaca accgcatgcc gagtcagatc
     1321 gaagccacgc cgggctccag tcagccttgc tccgcggcca atccggacgg ctatgaccag
     1381 ggctccagca cggcgaacgg gttgacgcca tcctgcgcag gccccttcgc gctcacgacc
     1441 gcaaacggtg caagcgcggt ccccggcacg gcaggtgcgg gcctcaatcc cggcaccggc
     1501 caagtgatca gcagcggcaa ttccggcacc tataccgccc ccggcgaact gatcatgtat
     1561 ccggaaggct tccgtcccat ggaagtgctg aaggaagacg attaccagta caatgtcggc
     1621 gagaagttca acctgttcgg ctgggcagtg gatgccgatg tcggttacgg caaggatatc
     1681 gacaatatct acacctggaa ctccggcaac cgctcgctgt tcatcgacac gcatacctcg
     1741 ccgagcaatt tctatgacgg cagcttcacc gccagccagc tcaccggcac catcgacgcc
     1801 acccacgcct tcaatgtggg cctggcttcg ccgctgacag tggcggttgg cgtggaagca
     1861 cgccaagacg agttcgccat cggcgcgggc gatgcggact cctattacaa ggaaggcgcg
     1921 cagtccttcc cgggcttcac gccctcagcc gccggcgatc acagccgcaa gaactatgcg
     1981 ggctatatcg atctggcggt tgctccgatc gaggccttgc agatcgacgt ggcgggccgc
     2041 gccgagcatt ataccgactt cggcgacacc cagatcggca agatcacagc gcgctacgac
     2101 ttcaacccgc aatgggcgat ccgcggcacc atttcgaccg gattccgcgc gccgaccctg
     2161 gcggaagagt tctacactgc cgtcaacgtc tcgccgaact cggcgaccgt gcagttgccc
     2221 gccgactccg cggcggccaa ggttctgggc ttgcccaacc tggtgccgga agtctcgacc
     2281 agctactcgg ccggtatcgt ggcccatccg ctggacgatc tcagcgtcac cgtggatgcc
     2341 tattcgatcg ccatcggcga ccgcatcacc agctccagca ccgtgaacag cgcgggtggc
     2401 gtgatcaaca cgccgctggt caatcaggcg atcgcggcgg acggcgtcgt gctcgatccc
     2461 accgccaccc agaatggcgc gacggcattc ctgaacggca tctccacact cacccagggc
     2521 gtcgacgtca ccgccaatta tccgaccgat ctgggcgttt acggcttggt ggattggacc
     2581 tttgctgcca actacaacca gaccgcagtc tcgcgcgtgg cgccgacgcc ggcagtgctc
     2641 accgcctcca acgcgggtgc gaccttcttc tatccggata cgctgtatga cttcacgcac
     2701 agcgcgccca cgacgaagat cggtcttacc gcgaactggt cgctggatga gttcggtatc
     2761 accctgcgcg agaccctgta tggtccgatg cacggctata ccagccccga aggctgcacc
     2821 acgctcgata cgtgcgtgta catcccgcag gcggcggttg gcctcaccga cctcgaagtc
     2881 cggtataacg tcaccgatca gcttcagttc gcactgggcg ccaacaacct cttcaacatc
     2941 cgtcctgacg ccatgccgta tgatcagaac gcctacggcg ccggtgtcgg cgctccggct
     3001 gatggcggca atgtcatcgg caacccgatc ccgggtgcgt tcgatccgaa tggcggctat
     3061 tattatggcc gcatcacttt caacttctaa acgtcggacg tcttagcgat tgacccgccc
     3121 gtttccctag aggaaatggg cgggtttttc tttgcgccgc gcgcaaatca gccgcgcgct
     3181 tctttgcggc tccgaaaagg cgtagaggtt caccagtggg aaacggcctg gcgcagatca
     3241 tggacatggg ttgaacggac atgacggggg caatgatgaa gaagacacat ttgctggccg
     3301 ctgcggcggt tttggctttg gccgagccgt ctctcgtggc acaggcgcag acaggtgggc
     3361 agaatgtgga ttggccgctt tacctgggcg acgccagcgg cagcaaattc aagccgctgg
     3421 accagatcaa cgcctcgaac ttctccaatc tggaagttgc gtggcgcttc aagaccgatc
     3481 atatgggcaa ccgcccggaa tataagctgg aaggcacgcc catcgaagtg aacggcgtgg
     3541 tctacgccac cgccggttcg cgccgtgcgg tggtggcgct ggacgcggtg acgggcgagc
     3601 tgctctgggt ccatggcgag aaagagggcg cgcgtggcgc cgccgctccg cggcaattgt
     3661 cgggccgtgg cccggcttat tggagcgacg gcagggatgc gcggattctg tacgtcacgc
     3721 ccggctatca gttgatctgc ctggacgcca ggaccggcca gcgtatcgcc ggcttcggca
     3781 acaacggcgc ggtcgacctc aaggcggacg atgaccagaa gattcagccc gatcttacca
     3841 ctggcgaaat cggctggcag tcggcgccca ccggggtggg cgacaaga
//
LOCUS       DATAVD010001695         2194 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2209121, whole genome shotgun sequence.
ACCESSION   DATAVD010001695 DATAVD010000000
VERSION     DATAVD010001695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2209121"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..187)
                     /locus_tag="VHX39_32495"
     CDS             complement(<1..187)
                     /locus_tag="VHX39_32495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995914.1"
                     /translation="MADRIAWISPVRLIGSRPGCTNRGILADQKHPLPQVLNIAGAKQ
                     PPILTIGNAIGRRGNITD"
     gene            complement(208..1011)
                     /locus_tag="VHX39_32500"
     CDS             complement(208..1011)
                     /locus_tag="VHX39_32500"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF024122.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX3995915.1"
                     /translation="MTGTRLTLAQSCPDAAAVVAAPVLICDLDGTILDGNSFSLWILY
                     LMFGRLPELRPSVRIRLSLRLQLLLVYRRLGRINHAELMREVQHAWHTATENVPDSST
                     VRVPAMLRRRVRPAFEPLLRQIAAGEIDAVLATAAAGEYALPLGRQMGFRHVLATPCR
                     LASAGALNHRGQKLRRVLGFLTQQQWRERSRVLLTDHVDDLPLIQHCHAVGWFGSAEM
                     LARARSDANGVRFIDCRGLDAAALSQAIVALSEHGCAVKRSALAASTVA"
     gene            complement(1102..1761)
                     /locus_tag="VHX39_32505"
     CDS             complement(1102..1761)
                     /locus_tag="VHX39_32505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995916.1"
                     /translation="MSFVQRPDTGPTASASRTRSAAPLSTRTLGPDAFTSACGDLLRL
                     VERDYTPALLVGVRTGGLVVAETMAEFASPPLPVLPLTCRRPSTSFKSRLPGLKPLLG
                     ALPESLLNALRRAEHHIVTGNRRAVRPTEINLAEAIAIGNWVRMSGGPKRVLVVDDAV
                     DSGVTLATVLRTLRAACPNDMTLRIAVITVTTPDPAVAPDYALHRGVLCRFPWSFDAP
                     R"
BASE COUNT          414 a          713 c          701 g          366 t
ORIGIN      
        1 cgtcagtgat atttccgcgc cggccgatcg cattaccgat ggtcaggatg ggtggctgtt
       61 tcgcgccggc gatattcaag acttgcggca gcggatgctt ctggtccgcg aggatgccgc
      121 ggttcgtgca gccggggcgg ctgcctatca ggcgtactgg gctgatccag gcgatccgat
      181 cagccatggc aatgcattgt tgtcgattta tgcgaccgtg ctggcggcca atgccgatcg
      241 tttcacggcg cagccatgct ccgacaacgc gacgatcgcc tgcgacagcg cagctgcgtc
      301 cagtccgcga cagtcgatga agcgtacgcc gttcgcatcg gagcgggcac gagccagcat
      361 ctcggccgag ccaaaccacc cgaccgcatg acaatgctgg atcagcggca gatcgtcgac
      421 gtgatcggtc aacagcacgc gtgatcgttc gcgccattgc tgttgagtga gaaaccccag
      481 cactcgccta agtttttgcc cgcgatggtt tagcgcaccg gctgatgcca gtcggcacgg
      541 cgtggcgagc acatggcgaa atcccatttg ccgacccaaa ggcagcgcat actcgccggc
      601 agcggcggtc gccagaacgg cgtcgatctc gccggccgca atctgccgta gcaagggctc
      661 gaatgccggc cgtacccggc gccgtaacat cgccggcacc cgcaccgtcg aactgtcggg
      721 aacattttcg gttgcggtgt gccatgcatg ctgcacctcg cgcatcagtt ccgcgtgatt
      781 gatccggccg aggcggcggt acaccagaag aagctgcagc cgcagcgaca gcctaatgcg
      841 cacactcggg cgtagttccg gcaatcgtcc gaacatgaga tacaggatcc acagcgaaaa
      901 actgttgcca tccaggatcg ttccgtccag gtcgcaaatc agcaccggcg cggcgacgac
      961 cgccgccgcg tcagggcatg attgcgccag tgtgagccgt gttcccgtca tggcatggca
     1021 cgtccgggcc atctgacaaa gcacggtgcc ggttccgatg gcccgcccag gctgggcgat
     1081 gacaacgaaa cgaatatcgc ctcaacgagg ggcatcgaac gaccagggaa accggcacag
     1141 cacgccgcga tgcagcgcat aatccggcgc cactgccggg tctggcgtcg tcacagtgat
     1201 caccgcgatg cgcagtgtca tgtcgttcgg acaggccgcg cgcaaggttc gcagcacggt
     1261 ggccagggtg acaccgctgt caaccgcatc gtcgaccacc agcacacgct tcgggcctcc
     1321 cgacatccgc acccaattac cgatcgcgat ggcttcggcg aggttgatct cggtgggccg
     1381 cacggcacgg cggttgccgg tcacgatatg gtgctcggcc cggcgcaatg cgttgagcag
     1441 cgactccggc agcgccccga gcaggggttt cagcccagga aggcgggatt taaaagaggt
     1501 tgagggccgg cgacaggtga gcgggagtac cggcaatggc ggcgaagcga actccgccat
     1561 tgtctcggcg accacaaggc ctccggtgcg cacgccgacc aggagcgcgg gcgtgtaatc
     1621 acgctctacc aatctgagca gatcgccgca tgcggatgtg aaagcgtcgg gtcccagtgt
     1681 tcgcgtcgac agcggggcgg ctgacctcgt acgggacgcc gacgcggttg gcccggtgtc
     1741 cgggcgttgc acgaaactca tggcatctcc tctcgctggc ccgcggcgcg cacggtttac
     1801 cgatgcccgc gcaggttgcc ggtgcccgcc cgggaggccg acgcccatgc ggactgccgc
     1861 ccgcgcggac tgtcattgcc tcagcaagac cgatgccaga gcaagaccgg tgccagcgcg
     1921 ggcatgcggc gcgcgtcaac gggaacggct tgatggcgaa gccgtccctg aaaaatctga
     1981 ggacgtgaag gtccttacgc ggcaccgctc gcggcatcca aaccaaatct ttgcgtcctg
     2041 cgcgccctcc gggatgagat ggagcgcttg catcgcgcga gcattcaccc tctcccacca
     2101 caaccgcttg acaaatcaca tcaatattgt catcgccacc ttgacctggg ctgcctttgg
     2161 gcacctctga cccggggatt tgggaggcca gccc
//
LOCUS       DATAVD010001696         4461 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1091801, whole genome shotgun sequence.
ACCESSION   DATAVD010001696 DATAVD010000000
VERSION     DATAVD010001696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4461
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1091801"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..240
                     /locus_tag="VHX39_32510"
     CDS             <1..240
                     /locus_tag="VHX39_32510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995917.1"
                     /translation="VTRDPTVKQPKPMTEGQRAYEAKRAAKAGLSLDKWLAAKERDRL
                     AEEKAKAKAVEAAKPAKPPGFFRRMMDRAHKPLGS"
     gene            335..1207
                     /locus_tag="VHX39_32515"
     CDS             335..1207
                     /locus_tag="VHX39_32515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995918.1"
                     /translation="MPRLVGDPAAFLDALRNEAGGAPVALGVDLPIGVPRTYAALRPE
                     AGFMHFLETIRDWPDFFLVCEALSDIRPDRPFYPARGIKGMTRASHALALGLGGASGL
                     SRLCDRATAERPPGAPPFWTLGANQSGKAAIAAWRDMLLPALALRDSRIRLWPFEGAF
                     RALLSPGVVAMAETYPAEALRHLGIKLRGSKRRQSDRAAVAGALLAAMARLEVVPEAG
                     LVEAVTNGLGADPAGEDRFDCLLGVLCVINVLAGHRPDTAPDDPWLATWEGWVLGQTA
                     LPMLDVLGGAAQYS"
     gene            1391..2587
                     /locus_tag="VHX39_32520"
     CDS             1391..2587
                     /locus_tag="VHX39_32520"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX3995919.1"
                     /translation="MDWDKAFAGVKVIDLTGGVAGPSCAMMLAQHGADVIKVETPHAG
                     GDWSRILGRTYEDHSAFSVYGTLGKRSVAVDLKTPDGEQILWRLIDGADIFMEGLRPG
                     TMKRYGFGYDDVSARNPGILYYSISGFGQIGPLASRPAMDPVLQAFIGIVNENRGDRD
                     NHPHRFAISAIDMYTGLLGFQALSTSLFIQARQKVKQGRYIEASLMQGGATLSVIRMI
                     AQYLERGQATRTSMPNGVFDTEDGQLNVTMVRPTDWPPFCEVIERADLLEDPRFATHA
                     ARGKNLDELYTVVRPVFKAKSTEWLAKRFSERNIMNYRVNSYEEFLREEQVAATGIIS
                     WLIQPGFSETVPMPNIPGLPPFESGTKRAHAPRLGEHTREVLREHGYADAEIAALIEK
                     KVVAGP"
     gene            2786..3451
                     /locus_tag="VHX39_32525"
     CDS             2786..3451
                     /locus_tag="VHX39_32525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995920.1"
                     /translation="MPDDRVYPPVDRTRILTSDPVVTTEIGWDRNQGYSQQTVAKSVL
                     DAAMDGIKNGNVKTYFYSLFDDGAGAFGLMNQNGTPMAAGTALHNLTTLLADNAANAS
                     TFTTGSLNYSLSHTTANDNSMLFAKSDGTWWISLWDEVDTGHNVTVTLSGPATDIKIF
                     DPLTGTNATKDVTGASSVTVKLTDHPLLIEVSPSQVVPSSPPPPPPPTTITIAPGDAN
                     PVC"
     gene            3445..3948
                     /locus_tag="VHX39_32530"
     CDS             3445..3948
                     /locus_tag="VHX39_32530"
                     /inference="COORDINATES: protein motif:HMM:TIGR03661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion C-terminal target
                     domain-containing protein"
                     /protein_id="HEX3995921.1"
                     /translation="MLNSNVTIVATAGNHMLFIGGTHDIAVLTGGTETVQAYQGYNTI
                     TTGTGNDTIRIAGSGNVIDAGSGTNRIEDSGSANTLVMPGKGRDDVYGYVIQNGDTID
                     FRAALKTTAWNGQAATLANFLHVSTSGNDAVITIRATAAGAVVGTMDLHDSGALSMAG
                     LLAHAVT"
     gene            4135..>4461
                     /locus_tag="VHX39_32535"
     CDS             4135..>4461
                     /locus_tag="VHX39_32535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002728155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3995922.1"
                     /translation="MANRQLSYDHGISATPLLNETIGGSLDKASARWPDREAVVVRDQ
                     NIRMTFSTLRQQADRLAAGLIALGLVPGDRVGLWSPNRIEWVLSQYATAKAGLILVNL
                     NPGYRVA"
BASE COUNT          843 a         1378 c         1428 g          812 t
ORIGIN      
        1 gtcaccaggg atccgactgt gaagcaaccg aaaccaatga ccgagggtca gcgcgcctac
       61 gaagcgaaac gagccgccaa ggcgggcctc agcctggaca aatggctggc cgccaaggaa
      121 cgcgaccggc tggccgagga aaaggccaaa gccaaggccg tcgaagccgc gaaaccggca
      181 aagccgccgg ggttctttcg acgcatgatg gatcgcgctc acaaaccgct ggggtcctga
      241 cccaattatc gcagcccatg ccgactggag catcgacccg cgcaaacgtt gggccgcggt
      301 cgcgcggcag gacggggcgg gctggcggat cggcgtgcct cggctggtgg gcgacccggc
      361 tgccttcctt gacgcgttgc gcaacgaggc cggtggcgcg ccggtcgcac ttggcgtgga
      421 cttgccgatc ggcgtgcctc gcacctacgc ggcgctgcgg ccggaagccg gcttcatgca
      481 cttcctggaa accatccgcg actggcccga cttcttcctg gtctgcgagg cactgagcga
      541 catcaggccg gatcgcccgt tctatcccgc gcgcggcatc aagggcatga cgcgggcctc
      601 gcacgcgctg gcgctggggc ttggcggcgc atccggcctg tcacggctgt gcgaccgggc
      661 caccgccgaa cggccgcccg gtgcccctcc cttctggaca ctgggggcca accaatccgg
      721 caaagccgcc atcgccgcct ggcgtgacat gctgttgccg gctctggctt tgcgcgacag
      781 ccggatccgc ctctggccgt tcgagggcgc gttccgtgcc ctgctctccc ccggtgtcgt
      841 cgccatggcc gagacctatc cggccgaggc gttgcgtcat ctgggcatca aactgcgagg
      901 cagcaagcgg cggcaatccg accgggctgc cgttgcgggt gcgctgctgg cggccatggc
      961 acggttggag gtcgttccgg aagcagggct ggttgaggcg gtgaccaacg gcctcggtgc
     1021 cgatcccgcc ggcgaagatc gtttcgactg tcttctgggc gtgctgtgcg tgatcaacgt
     1081 gctcgccgga caccggccgg ataccgcacc ggacgaccct tggctggcga catgggaggg
     1141 ctgggtgctt ggccagaccg ctttgcccat gctggatgtt ctggggggtg cagctcaata
     1201 ttcgtgacgc tatcggcaaa tttgctcgga gcgtttgccg ctccgggaat gccggagtta
     1261 ttgcataatg cgagcgattt gcgtgcggct cagtgggcgt ccgcggcgcc cgccggcaat
     1321 gttgtcaacg cagcccggtt cagccaccct tgcaggaaga tcaaccctca gtggatggaa
     1381 acggacggcc atggattggg ataaagcgtt cgcgggcgtg aaagtcatcg acctgaccgg
     1441 tggggtcgcg ggcccctcct gcgccatgat gctggcacag cacggcgctg atgtgatcaa
     1501 ggtcgagacc ccgcatgccg gcggcgactg gtcacgcatt ctcggccgca cgtatgagga
     1561 tcattcggcg ttttcggtgt atggcacgct tggcaagcgc agcgtcgcgg tcgatctgaa
     1621 aacgcccgat ggcgagcaaa tcctttggcg cctcatagac ggcgccgaca tcttcatgga
     1681 agggctgcgg cctgggacga tgaagcgtta cggctttggc tacgacgacg taagcgccag
     1741 gaaccctggc attctgtatt attcgatttc cggtttcggt cagatcgggc cgctggcgtc
     1801 gcggccggcg atggatccgg tgctgcaggc gttcatcggc atcgtcaatg agaaccgcgg
     1861 cgatcgagac aaccatccgc atcggttcgc catctcggcg atcgacatgt acacggggct
     1921 gctggggttc caggcgctgt caacgtcgtt gttcattcag gcacgacaaa aggtaaaaca
     1981 ggggcgctat attgaagcca gcctgatgca aggtggtgcg acgctgtcgg tgattcgcat
     2041 gatcgcgcaa tacctggagc gcggccaggc gacacggacc agcatgccga acggcgtgtt
     2101 cgacacggaa gacgggcagt tgaacgtgac gatggtgcgg ccaaccgact ggccgccatt
     2161 ctgcgaagtg atcgagcggg ccgatctgct ggaagaccct cgcttcgcca cccatgcggc
     2221 gcgcggcaag aatctggatg aactgtacac cgtggtgcgc ccggttttca aagcgaagtc
     2281 caccgagtgg ctggcgaaac ggttctctga gcgcaacatc atgaattacc gggttaattc
     2341 gtacgaagag ttcctgcgcg aggaacaggt cgctgcgacc gggatcattt cctggctgat
     2401 tcagcctggg ttttccgaaa cggtgccgat gccgaacatt cccggtctgc caccgtttga
     2461 aagcggcacc aaacgcgctc acgcccctcg actgggcgaa cacacgcggg aggtgttgcg
     2521 cgaacatggt tatgctgacg cagaaattgc cgcattgatc gagaagaagg tcgtggccgg
     2581 tccgtgaacc gccaggctgc gatgaccagc ccaggtgcgg cggcgccgcc ttggagctcg
     2641 ccgccatcat ttgaccgaaa cgggcggcac ggcaccgaaa acctgctatg tcgcgtcttc
     2701 ggcggtcccc gtctgggcga tttttaaaga tcgtgcgaac cgccggtagg cctcatccgt
     2761 cgctccaggt atccctgtgg gcatcatgcc tgatgacaga gtttatccac ctgttgatcg
     2821 aacgcgtatt ttaaccagcg acccggttgt cacgactgag attggttggg acagaaatca
     2881 gggctacagc caacagaccg tcgccaaatc cgtgctcgat gctgccatgg acggcatcaa
     2941 gaacggcaac gtgaagacgt atttctattc actgttcgac gatggcgctg gcgcattcgg
     3001 cctgatgaac cagaacggca cgccgatggc ggcgggcacc gcgctgcata accttaccac
     3061 gctgttggcc gacaacgccg cgaatgcctc gaccttcacc accggatcgc tgaactacag
     3121 cctgtcccac accaccgcga acgataattc catgttattc gcgaagtcgg acggaacctg
     3181 gtggatatcg ctgtgggacg aggtcgatac cgggcacaat gttaccgtga ctctgtccgg
     3241 tccggctacc gatattaaga tattcgatcc gttgaccggc acgaacgcca ccaaggacgt
     3301 gaccggggca tcgtcggtga cggtgaaact cactgatcat ccgctgctga tcgaagtctc
     3361 gccgtcacaa gttgtcccat cgtcgccgcc tcccccgcca ccgccgacca ccattacgat
     3421 cgctcctggc gacgcgaacc cggtgtgctg aacagcaacg tgaccatcgt cgccaccgca
     3481 ggcaaccaca tgctgttcat cggcggcacc catgacatcg ccgtcctcac cggcgggacg
     3541 gagaccgtgc aggcctatca gggttacaac acgatcacca ccggcaccgg gaatgatacg
     3601 atccggatcg ccggatccgg caacgtgatc gatgcgggaa gcggaacgaa ccggatcgag
     3661 gactccgggt ccgcgaatac cttggtgatg cccggcaagg gccgggatga cgtatatggc
     3721 tacgtcattc agaatggcga tacgattgac tttcgtgcgg cgctcaagac gacggcatgg
     3781 aatggccagg cggctaccct ggcgaatttc ctccacgtca gcaccagcgg caacgatgcc
     3841 gtaatcacca tccgtgccac ggcggccgga gcggtcgtcg gcaccatgga tctgcacgat
     3901 agtggtgctt tgtcgatggc cggactgctc gcccatgcgg ttacctgaag cagcatcggc
     3961 cgacgcagtt cgtggctgac cgggcttatc ggcgtcagag cgtaattggt tcggggcgac
     4021 cgggcagata gtcaaccggc gcgggctttg ccggtgcagt cctgccagtc agtttcctgc
     4081 cggtcctgat cgtgccaaac tcgggtggca caataagaac cgggagggca ccacatggcg
     4141 aaccggcaac ttagttacga tcatgggatt tccgcgacac cgctgctgaa cgaaacgatc
     4201 ggcggcagcc tcgacaaggc ctcggctcgc tggcccgatc gagaggccgt ggtggtccgt
     4261 gatcagaaca ttcgcatgac attctccaca ctgcgacagc aagccgaccg ccttgccgcg
     4321 ggcctgatcg cgcttggcct ggttcccggc gatcgggtcg gcctgtggtc gccgaaccgg
     4381 atcgagtggg tgctgagcca gtatgccacc gccaaagccg gcctgatcct ggtcaatctg
     4441 aacccgggtt atcgagtggc g
//
LOCUS       DATAVD010001697         2083 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1461120, whole genome shotgun sequence.
ACCESSION   DATAVD010001697 DATAVD010000000
VERSION     DATAVD010001697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1461120"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..725)
                     /locus_tag="VHX39_32540"
     CDS             complement(108..725)
                     /locus_tag="VHX39_32540"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEX3995923.1"
                     /translation="MLAIVALSLAACENHDGVSGQNMSQPQLHEDWKECSTFASEVRI
                     DGTARVRTGSPAFIGAGIGGAIIGYGAASEIAHNESFNQYMEARGWQAANGINLIGTL
                     PPSFARAPIPRRQLLVQTDPVTLDVAHELHLNPPRGVLLTEVLSGGVASSAGLRSGDV
                     IIGFNGANVTNPGDLEQLLTRVAPSSIVTAVVWRNNVEQPVQLHF"
     gene            complement(923..1723)
                     /locus_tag="VHX39_32545"
     CDS             complement(923..1723)
                     /locus_tag="VHX39_32545"
                     /inference="COORDINATES: protein motif:HMM:NF004795.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEX3995924.1"
                     /translation="MTQAKDDGRVIVRVDRRGAHGHVVTVSINHPARLNSLSSGVIAA
                     FIEAVREAAGDPALRCLIVTGEGERSFIGGANLVELETLNPATARAFLTQIHTMCQVL
                     RDLPVPVIARVNGFCLGAGLEVMAACDLHIASDNAVFGMPEVKIGLPSVVEAALLPQL
                     IGWGRTKVLLYTGDNIGAATALEWGLVERVVPAAELDAAVETWVGSIVDSGPRAIRLQ
                     KELIREWEAMPVSDAIQAGIRMMGRAYETEEPHRMVAAARARLRDRKK"
     gene            complement(1758..>2083)
                     /locus_tag="VHX39_32550"
     CDS             complement(1758..>2083)
                     /locus_tag="VHX39_32550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995925.1"
                     /translation="GPDAHAGPLTQLTAAGAHSKASDRFAAAGSVVPSGAFMLGVAAS
                     RRDSRQLRKLAAVVRPLTEGPAQLVWQQGNAKPGGTAMTATLELSEARYEQLKSGLGS
                     CLAVR"
BASE COUNT          389 a          701 c          609 g          384 t
ORIGIN      
        1 acaacgacgc ccggaccggc atggatcatg ctcgcaagtc aaaacgtgat caatccgcag
       61 ccgtccggcg gtgcctggcg gtcctgaggt ccgagcagcg ggtcgcgtca aaaatgaagc
      121 tggaccggct gctcgacgtt attccgccaa acaacggcgg tcacgatgct gctgggagcg
      181 acccgggtca gcagctgttc gagatcgcca ggattcgtga catttgcgcc attgaacccg
      241 atgataacat cgcctgacct caaacccgcc gacgacgcga ctcctccgct caggacctct
      301 gttagcaaga cgccgcgcgg cggatttaag tgtagttcat gcgccacatc cagcgtgacc
      361 ggatcggtct gtaccaatag ctggcggcgc gggatgggcg cccgggcaaa cgacggcggc
      421 agggtgccga taagattgat gccattggcg gcctgccagc cgcgggcttc catgtactga
      481 ttgaagctct cgttgtgcgc aatctcactg gcggcgccat agccaatgat cgcaccccca
      541 attccggcgc cgatgaacgc aggtgacccc gttctgaccc gagccgtccc gtctatcctg
      601 acctcgcttg cgaatgtcga acactctttc cagtcctcat ggagttgcgg ttgggacatg
      661 ttttgccccg acaccccgtc gtggttttcg catgcagcga gggacagggc gacaatcgcg
      721 agcaagaaac caccagacga catcgacata acccgcccca ttaaatttat tctcaatttc
      781 tcagaattat tacagtggga cagctcactt ccgcaagcag cttttggttg cgaaagttcg
      841 tcgccacgca gtccggagct gttgcgctta agaaccatcc ctgtcagatc aactgcgatc
      901 ccgacgaccg gtcagggtgc agctatttct ttcgatcgcg caaccttgcc cttgccgcag
      961 caaccatacg gtgcggctct tccgtctcgt acgcccggcc catcatgcga atgcccgcct
     1021 ggatcgcgtc gctgaccggc atcgcttccc attcccggat cagttctttt tgcagacgga
     1081 tcgcccgtgg cccggagtcc acgatcgagc cgacccaggt ctccactgcc gcatccagtt
     1141 cggccgccgg cacgacgcgt tccaccagcc cccactccag cgcggtcgcg gcaccgatat
     1201 tgtcgccggt gtaaagcagg actttcgtgc gaccccagcc gatcagttgt ggcagcaacg
     1261 ccgcctcgac gaccgagggc agaccgatct tcacctccgg catgccgaac accgcattgt
     1321 cgctggcgat gtgcagatcg caggcggcca tcacttccag cccggcaccg aggcagaacc
     1381 cgttcacccg cgcgatgacc ggcaccggca gatcgcgcaa cacctggcac atggtgtgga
     1441 tctgggtcag gaaggcccgt gcggttgccg ggttcagcgt ctcgagttcg accaggttcg
     1501 cgccgccgat gaacgaccgc tcgccctccc cggtcacgat caggcaacgt agcgcaggat
     1561 cgccggccgc ctcacgcacg gcctcgatga atgccgcgat cacgcccgag gacagcgaat
     1621 tcagccgcgc cggatggttg atcgagacgg tgacgacatg accatgggca ccgcgccggt
     1681 cgacccgaac gatcacgcgt ccgtcatcct tggcctgggt catgcgcgac gttccttcct
     1741 tgcgatggtg tcccgaccta tcgaacggca agacaggagc caagcccgct cttcaactgt
     1801 tcgtaccggg cctcgctgag ttcgagtgtg gcggtcattg ccgtaccgcc cggtttggcg
     1861 ttgccttgct gccataccag ttgcgccgga ccctcggtca acgggcgcac gaccgcggcc
     1921 aatttccgaa gctgccggga atcccgccgc gatgcggcaa ccccgagcat gaacgcaccg
     1981 gatgggacga ccgatccggc agcggcaaat cggtcgctgg ccttgctatg cgcgccggcg
     2041 gcggtcaact gcgtcagtgg tccggcatgg gcatcggggc cct
//
LOCUS       DATAVD010001698         4828 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_721145, whole genome shotgun sequence.
ACCESSION   DATAVD010001698 DATAVD010000000
VERSION     DATAVD010001698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4828
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_721145"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..360
                     /locus_tag="VHX39_32555"
     CDS             <1..360
                     /locus_tag="VHX39_32555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995926.1"
                     /translation="QIFPARTHPADNPTDLPRYLQMGRIGIMASMEEEFNDWYNTCYI
                     PGFLKVPGVIRARRFTAIEAEPKYLTVYEFENPGVPDTKEWMAARDSNPWSRRVRAGM
                     RLDEGSPAVFERIFPRL"
     gene            388..780
                     /locus_tag="VHX39_32560"
     CDS             388..780
                     /locus_tag="VHX39_32560"
                     /inference="COORDINATES: protein motif:HMM:NF025292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin-like domain-containing protein"
                     /protein_id="HEX3995927.1"
                     /translation="MTSVVGTWRLVRAVSRDANGIELPTPYGGHAMGRVMLGADGRMM
                     AVTCDGRREIPDGGKREYSSCCGNYTRDGKQLITRVDAASDPTRLGSDQIRDVRFEDG
                     LMVLRPPARTYGGAAEQRELYWEKIADV"
     gene            868..2376
                     /gene="tcuA"
                     /locus_tag="VHX39_32565"
     CDS             868..2376
                     /gene="tcuA"
                     /locus_tag="VHX39_32565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent tricarballylate dehydrogenase
                     TcuA"
                     /protein_id="HEX3995928.1"
                     /translation="MTPVNYQPVDVLVIGAGNAAANAALAAYEAGCSVVMLETAPESA
                     RGGNSAFTGGAFRFVYHDVKDLLALDPAIAELDLSSIDFGTYTQEQYFDDMGRLTEYR
                     CDPDLTEVLIGNSYASALWLKKHGVKFQPALGRQAFKVDGKFRFWGGLACHIHGGGQH
                     LVETLHAKLAQVGILVLYDSTAWQFLQGDDRVEGVRVRHGGRIYNLRAKSIVMACGGF
                     ESNAEMRARYIGPNWDLAKVRGTRYNQGYGHRMAMDIGAAVAGHWSGAHAVQWDMNAP
                     PFGDLSVGDQFQKHNYPFGVLVNARGERFLNEGRDFHSYTYAAYGHEVMKQPGLFAWQ
                     IFDSKINNLLRSEYRIPRITKETGNTLEELAPKLTGVDTEAVLETLRAYNAAPRPDVK
                     FDPNIHDGLRTFGLPIDKTNWALQLDTPPFHAYGVTAGVTFTFGGLKVDTTARVEDTS
                     GAPIPGLFAAGEIVGGLYYHNYGSGTGLVAGVTFGRIAGEGAAAFAKSNGNL"
     gene            2468..3448
                     /locus_tag="VHX39_32570"
     CDS             2468..3448
                     /locus_tag="VHX39_32570"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3995929.1"
                     /translation="MLQPVSLLRRSAQAASAALLAAPATASESAPIREYQVVKTRDGK
                     PIHLTMYRKRSGGTRLPVLFLVHGSSMSALSSFDLQVPGTENYSMMTAFSQAGFDVWT
                     MDHEGYGKSDRTDGNSDIASGVEDLKAAVEIVQRETGQTRYHFLGESSGALRAAAYAM
                     VAPERCGRLVLAAHTYTGKGSPTLAKRAENLEYFKTNNRRPRDKAMIESIFMRDRPGT
                     TDPAVPAALVKSELVYGDTVPTGTYLDMTSRLPVVDPAKILSPVLVVRGEYDGIASME
                     DLVDFFEKLPNGDKQFSVIAGAAHALATCKARFAFWYASETFLKMPVLAD"
     gene            complement(3474..3677)
                     /locus_tag="VHX39_32575"
     CDS             complement(3474..3677)
                     /locus_tag="VHX39_32575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995930.1"
                     /translation="MRDITQPTQYSVPSAGASRQISVWNRRLMITAVVTILWAASMLA
                     LKAMGPDARALMAGEGLLIQSDQ"
     gene            complement(3833..4636)
                     /locus_tag="VHX39_32580"
     CDS             complement(3833..4636)
                     /locus_tag="VHX39_32580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HEX3995931.1"
                     /translation="MPIPGLVWAFWLFDGDLGGRAVNAIIHGFGSWTVRFLMLSLAIT
                     PLARILEWPRLLTVRRMVGLTALAYATTHFTLYIVDEKFNLLTVASEIVLRFYLAIGF
                     VALCGLVALGVTSTDAAMRRMGKRWKQLHRLVYPIGVLALLHFFIQTKANVGEPVFVS
                     GLFCWLMLWRLLPMPWRTSLPAYYALVPVGAVLTAAIEFAWYGVATKIDPFRILNANW
                     SQRFFPRPAHEVAAVALVVALVVTARRLWSWRIAARQSAGIAPVRVNAP"
BASE COUNT         1011 a         1404 c         1462 g          951 t
ORIGIN      
        1 cagatatttc ctgcccgcac gcatccggcg gacaatccga cggacctgcc gcgatatttg
       61 cagatgggcc gcatcggcat catggcctcg atggaagagg agtttaacga ctggtacaac
      121 acctgttata ttcccggctt cctgaaggtg cctggcgtga tccgggcgcg gcggttcacc
      181 gcaatcgagg cagaaccgaa atatctgacc gtctacgagt tcgaaaatcc tggagttccg
      241 gacaccaagg aatggatggc ggcacgggat tccaatccct ggagccgccg agtacgggcc
      301 ggtatgcgac tggacgaagg ctcgcccgcc gtgttcgagc ggatttttcc ccggctttga
      361 tccaacaagt ttgataagga ctgcgttatg acatcagtgg ttggaacctg gcgcctcgtg
      421 cgcgccgttt cgcgggacgc gaatggcatt gaattgccga cgccctatgg cgggcatgcc
      481 atggggcggg tgatgctcgg cgccgatggc cgcatgatgg cggtcacgtg tgacggaagg
      541 cgcgaaatcc cggacggtgg caaacgggag tacagtagtt gctgtggtaa ctatacccgc
      601 gacggcaagc agttgatcac ccgtgtcgac gctgcatcag acccgacccg actgggctct
      661 gatcaaatac gcgatgtgcg gtttgaagat ggactgatgg tgctgcgtcc tccggcgcgg
      721 acttatggcg gcgcggcgga gcagcgtgag ttgtactggg agaagatcgc cgacgtctga
      781 ttgacatcgt ccatgccagt ggacagggtc cggccccatg gcccagacgg gtgtgatgcc
      841 tggggggcag gatcagaggg taggcccatg acaccggtga attatcaacc cgtcgacgtt
      901 ctggtaatcg gcgcaggcaa tgccgctgcc aatgcggcac ttgcggccta cgaagcgggc
      961 tgctcggtcg tgatgctgga gaccgcgccc gaatcggccc gtggcggcaa ctccgctttc
     1021 accggtgggg cgtttcgatt tgtctatcac gacgtcaaag acttgctggc actggatccc
     1081 gccattgccg agctggattt gtccagcatc gatttcggca cctatacgca agagcaatat
     1141 tttgacgaca tggggcggct gacggaatac cgatgcgatc ccgatttgac tgaggtgttg
     1201 atcggtaact cctatgcctc ggcattgtgg ctgaaaaaac acggcgttaa atttcagcct
     1261 gcactgggcc gtcaggcgtt caaggtcgat ggcaaattcc gcttctgggg cgggcttgcc
     1321 tgccacatcc acggcggcgg ccaacatctt gtcgagaccc tgcacgcaaa actggcgcag
     1381 gtcggtattc tggtgctgta tgactcgacg gcgtggcaat tcctgcaggg cgacgatcgg
     1441 gttgaaggtg ttcgtgtgcg ccatggcggg cggatttaca atctgcgggc gaagtcgatt
     1501 gtcatggcct gcggcggctt cgagtcgaat gcagaaatgc gtgcccgtta tattggtccc
     1561 aactgggacc tggcgaaggt gcgcggcacc cgatacaatc agggctatgg ccaccgcatg
     1621 gcgatggaca tcggtgccgc tgtcgccggc cattggtctg gtgctcatgc cgtgcaatgg
     1681 gacatgaacg cgccaccgtt tggcgatctg tcggtcggcg atcagttcca gaaacataat
     1741 tatccgtttg gtgtgttggt caacgctcga ggtgagcggt tccttaacga aggtcgcgat
     1801 tttcacagct acacctatgc ggcctacggg cacgaggtca tgaagcagcc tggcctgttc
     1861 gcctggcaaa tattcgattc gaaaatcaac aacctgctgc gcagcgagta tcgtattcct
     1921 cgcatcacca aggaaaccgg aaatacgctt gaggaactgg caccgaaact gaccggcgtc
     1981 gacaccgaag ctgtgctgga gaccttgcgt gcttacaatg ctgcgccgcg ccccgatgtt
     2041 aagttcgacc ccaacatcca cgatggtctt cgcaccttcg gactccccat cgacaagacc
     2101 aactgggctt tgcagctcga tacgccgccg tttcatgcgt acggcgtcac cgccggtgtg
     2161 accttcacct ttggcggttt gaaggtcgat acgacggcac gggtcgaaga tacgtctggt
     2221 gccccgatcc ccggcctgtt cgcagcggga gaaatcgtcg gtggtctgta ttaccacaat
     2281 tacggcagcg gcaccggttt ggtcgcaggt gtgacgtttg gccgcatcgc cggggaaggt
     2341 gccgcggcgt tcgccaaaag taatggaaac ctttgacacc tcagtgaaag gctgcaacgc
     2401 catgatcgga caccttaagg tcgcctcgaa tcgcccgggc aaccggcgcc agatggggac
     2461 accgtcaatg ctacagcctg tatcgctgct gcgccggagt gcacaggcgg cgtcggccgc
     2521 tttactcgcc gccccggcga ccgcatcgga gtcagcgccg atccgtgaat atcaggtggt
     2581 gaaaacccgc gatggcaagc cgatccatct gacgatgtac cgcaagcgtt cgggtggcac
     2641 gcggctaccg gtgctgttcc tggtgcatgg ctcgtcgatg agcgcactgt ccagtttcga
     2701 tctgcaggtt ccgggcaccg agaattattc gatgatgacg gcgttctctc aggcagggtt
     2761 cgatgtctgg acgatggatc acgaaggcta cggcaagtcg gatcgaaccg atggtaactc
     2821 cgatatcgcc tcgggggtgg aagatctgaa agcggcggtc gagatcgtgc agcgcgaaac
     2881 cggtcagacc cgctatcatt ttcttggcga atcgtcggga gcgttgcgcg cagcggctta
     2941 tgccatggtc gctccggagc gctgcggacg gcttgtgctg gcagcgcata cctataccgg
     3001 caagggctcg ccgaccctgg cgaaacgtgc ggaaaatctc gagtatttca agaccaataa
     3061 ccggcggccg cgcgacaagg cgatgattga gagcatcttc atgcgcgaca ggccgggcac
     3121 caccgatccg gctgtgccgg ccgctctggt gaagtcggaa ctggtctatg gcgataccgt
     3181 gccgaccggc acttatcttg atatgacgtc cagacttccg gtggtcgatc cagcaaaaat
     3241 tctgtcacct gtgctggtgg tgcgcggcga atatgacggc atcgcctcga tggaggacct
     3301 ggtcgacttc ttcgagaaat tgccgaatgg cgacaagcag ttttcggtga ttgccggcgc
     3361 ggcgcacgct ctggcgacct gcaaggcgcg gttcgcgttt tggtacgcct cggagacgtt
     3421 cctcaaaatg cccgtgttgg ccgattaagc atcggatccc gcagcaaccg gcgctattga
     3481 tccgattgaa tcagcagccc ttcgccggcc atcagggcac gagcatccgg tcccatcgcc
     3541 ttcaatgcca acattgaagc cgcccataaa attgtcacga ccgccgtgat catcagtctc
     3601 cggttccaga ccgaaatctg acgggaggcg ccggccgatg gcacagagta ctgagtgggt
     3661 tgggtgatat cgcgcatggt gtctgctcca tttcggagct ggacttacac gcaccgaatg
     3721 caaacacgca gtgacctgct tcacacgaac gagataaaat cggaatctgc gacgaactcc
     3781 gactgatcag gcaaaatttc gcggcccaca aatacggcga aacgcccaga gatcagggtg
     3841 catttaccct gactggagca atgccagccg attgtcgcgc cgcgattcgc catgaccaca
     3901 accgccgagc cgtcaccacc agcgcgacca caagtgcgac tgcggccacc tcgtgcgccg
     3961 gccgaggaaa aaaccgttgg ctccaattgg cattcagaat gcggaatgga tcgattttgg
     4021 tcgcgacgcc ataccaggca aactcgatcg ctgcggtcag cactgcgccg accggcacca
     4081 gcgcgtaata ggccggcaat gacgttcgcc atggcatcgg cagcaaacgc cacaacatca
     4141 accaacagaa cagccccgag acaaacaccg gttccccaac attcgctttg gtctgaatga
     4201 agaaatgcag aagcgccagc acgccgatcg gataaaccag ccggtgcaac tgcttccagc
     4261 gtttgcccat tcgtcgcatc gccgcatcgg tcgaggtcac gccaagtgcg accaacccac
     4321 acaacgcgac aaatccgatc gcaaggtaaa accgcaggac aatctcggac gcgacagtca
     4381 aaaggttgaa cttttcgtca acgatgtaca gcgtaaaatg tgtcgtcgcg taggccagcg
     4441 cggtcagccc gaccattcgc cgcaccgtca gcaatcgtgg ccactcgagg atccgtgcca
     4501 acggtgtgat tgccaatgac agcattagaa atcgtacggt ccaactgccg aagccgtgaa
     4561 tgattgcgtt caccgcccgc ccgcccaaat cgccgtcgaa cagccagaaa gcccagacca
     4621 ggcccgggat cggcatgcaa gcgagcaccg cggccttgaa tttcaggaat ctgccgtgtc
     4681 tgtctcgcca gggaacgcgc atggtcgggc ctcttgggtt ttgctgcata cgtggtctcg
     4741 gcgcgattgg atgcgttaca atttgcgggc ggcgagggcg cgaatttctg ccgacagcgc
     4801 ctcgggctcc accgtcgcca gccagcgc
//
LOCUS       DATAVD010001699         3164 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_721274, whole genome shotgun sequence.
ACCESSION   DATAVD010001699 DATAVD010000000
VERSION     DATAVD010001699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3164
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_721274"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1296)
                     /locus_tag="VHX39_32585"
     CDS             complement(<1..1296)
                     /locus_tag="VHX39_32585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995932.1"
                     /translation="MPVDPPASPDESPSLYWAGLRDDATTLGGVAGAFRRLGLICALL
                     IVTTLAIGLGVIWQLRSSAIADTQRELSNLGTVLAEQTSRTVQSIDLVLQEVQAHVAT
                     FHPTSPEGFRTEFAGEPTREYLSGLLRNLPQAETINLVDAKGTLLNWSRDRPLKQLDD
                     SMRDYFIWLRDHDDNGAFIGLPVWGRVNGKRVLFVARRIDGPDGTFLGIAVGLIDTKY
                     LEGFYGTISMVPGESVSVLRRDGFLIARYPEIAKPANPQMPAESPWFDRIANGGGSYL
                     TPGYFSGTPSIITVHPLRDYGLVVDVNMYQKAALRVWHTQAIVIALVMAGVTAAIAVL
                     FAVIIGQFRRQEEQNARLSLGRTALRDSERRLKAYAQMAADWFWEQDAELRFVRDSAI
                     PHITRRDDVGKSRWDLADREMDPGRWDAHKAVLAARLPFR"
     gene            1517..2590
                     /locus_tag="VHX39_32590"
     CDS             1517..2590
                     /locus_tag="VHX39_32590"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3995933.1"
                     /translation="MKLAIWSTTTPRENSTYPEMFRRQLDEAELADRIGIDQIWFFEH
                     HLLPTGPVPSPNLLIAATARTTRRIRFSSMVNILPFRHPLLVAEEAAMLDNLTNGRFD
                     MGLGRGLRPPEFEAFGVDQQQSREMFLESFDVIRRIWADENFVHRGKYWTVRKEAPLS
                     PPLVQRPHPPFLVSAQSEASLQWAAQHDIPFVQIDSLVHQAARDQALYRDVQVASGHA
                     PSPRLYLMREIYVAETDARARAEAQPYLLQYWDLWNRYTQFTRGGKLPESYDFWRRQA
                     PMLHAMDFDEIIAQDMVILGSPETVANSIIRLAGQLDLMGLAMIFKLGAMPYDMVEAS
                     MTAFGEAVIPKIRHLLDREGNGR"
     gene            complement(2587..2976)
                     /locus_tag="VHX39_32595"
     CDS             complement(2587..2976)
                     /locus_tag="VHX39_32595"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009927 - histidine phosphotransfer kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HEX3995934.1"
                     /translation="MSLDTLASDHGRSGAPTIDRAVLGHWLNGDDAAIDALLGVFLDS
                     ICDDAMRMRDLLARDELKQFSLAAHRLRGAALSMGARALADFVGTLYSAAQTNDRDAC
                     VDGMPTLAAHVQLVVVEVPGYAPPGGI"
BASE COUNT          633 a          980 c          955 g          596 t
ORIGIN      
        1 gcggaatgga agcctggcgg cgagaacggc tttgtgggca tcccagcggc caggatccat
       61 ctcccggtca gccaggtccc acctggactt gccgacatcg tcccggcggg tgatgtgcgg
      121 aatggcggag tcgcgcacga aacgcaattc ggcgtcctgt tcccagaacc aatccgcggc
      181 catctgggcg taggccttca accggcgttc actgtcacgc aaggcagtcc gccccagact
      241 caacctcgcg ttttgctctt cctgccgccg gaactggccg atgatgacgg caaacagaac
      301 cgcgattgca gctgtcacgc cggccatcac gagcgcaatg acaatcgcct gtgtgtgcca
      361 aacccgtagt gcggcttttt ggtacatgtt cacatcgacg accaacccat agtcgcgcaa
      421 tggatgcacg gtgatgatgc tcggcgttcc gctgaaatag ccgggcgtga gataggaacc
      481 gccaccgttc gcgatccggt cgaaccaagg tgactcagcc ggcatttgcg ggttggcagg
      541 tttcgctatt tcgggatacc tggcgatcag gaaaccgtca cggcgcagca cgctgaccga
      601 ttctcccggc accatgctga tcgttccgta aaagccctcc agatatttcg tatcgatcag
      661 cccgaccgcg atgccgagga atgtcccgtc cggtccatcg atgcggcggg cgacgaacag
      721 cacccgcttg ccgttgaccc gaccccagac cggcagaccg ataaatgcgc cgttgtcgtc
      781 gtgatcgcgc agccagatga aatagtcgcg catcgaatca tcgagttgtt tcagcggccg
      841 gtcacgtgac cagttcagca gcgtaccctt ggcatcgacc aggttgatgg tttcggcctg
      901 tggcagattt cgtaacaggc cggagaggta ctctctggtt ggctcgcccg cgaactctgt
      961 gcgaaacccc tccggtgagg ttggatgaaa cgtggcaaca tgggcctgga cttcctgcag
     1021 aacgagatcg atcgactgaa cggtgcgcga ggtttgctcg gccaggacgg ttccgagatt
     1081 gctcaattcg cgctgcgtgt cggcaatcgc ggaagaacga agttgccaga tcacccccag
     1141 cccaattgcc agggttgtca caatcagcag ggcgcagatc aaacctaagc gacggaaggc
     1201 gccggccact ccgcccagag tcgtcgcatc atcgcgcaac ccagcccagt acagactggg
     1261 cgattcgtct gggctggctg gtggatcaac cggcatgaca gaacactcga tgcaccaaaa
     1321 gctgctgaac cgagcgaaat ggctcggttg cgcaccggta ctctgccttc cgggcttact
     1381 actaaattgc gctttcccgg ttgcaaattc gtttcatccc cgccgatgtt gcattgcgac
     1441 aggcgtaggc cggttgcgct gccagcccgg atgccgacaa tggcgggggg cctcgcaccg
     1501 aggggaggat gcaaccatga aactcgccat ctggtcgacc accacgccgc gggaaaactc
     1561 gacatatccg gaaatgttcc gtcgtcagct tgatgaagcc gagcttgccg accgtatcgg
     1621 catcgatcag atctggttct tcgagcatca tttattgccg accggaccgg ttccctcgcc
     1681 gaacctgctg atcgccgcaa cggcgcggac caccagacgc attcgtttct ccagcatggt
     1741 gaatattctg cctttccggc atccgctgct ggtcgccgag gaagccgcga tgctagataa
     1801 tctaacaaat ggccgcttcg acatggggct cggtcgcggc ctgcgtccgc cggaatttga
     1861 ggcattcggc gtcgaccagc agcaatcgcg ggagatgttt ctcgagtctt tcgacgtcat
     1921 ccgccggatc tgggctgacg agaactttgt gcaccgcggc aaatactgga cggtgcggaa
     1981 agaggcgccg ctctcgccgc ctttggtgca gcgcccgcat ccgccgttcc tggtcagcgc
     2041 ccaaagcgag gcgtctctgc agtgggccgc acaacacgat atcccattcg tacagattga
     2101 ttcactggtg catcaggcgg cccgcgatca ggcgctgtat cgcgacgtgc aggtggcgtc
     2161 cggtcatgca ccatcaccgc ggctttacct gatgcgggag atctacgtgg cggaaaccga
     2221 cgcccgtgcc cgcgccgagg cgcagccgta tttgctgcaa tattgggatc tgtggaaccg
     2281 ctacacgcag tttacccgcg gcggcaagct gcccgaaagc tacgatttct ggcgccgcca
     2341 ggcgccgatg ctgcacgcga tggatttcga tgagatcatc gcgcaggaca tggtgatcct
     2401 tggcagcccg gagacggtgg cgaacagcat tattcgtctc gcaggtcagc tcgatctgat
     2461 gggcctggcg atgatcttca agctcggcgc catgccgtac gacatggtcg aagcgtcaat
     2521 gacggcgttt ggcgaggcgg tgataccgaa aatccgccat ctgctcgatc gcgaggggaa
     2581 cggtcgctaa atcccgccag gtggcgcgta gccaggcacc tcgaccacca ccagctgcac
     2641 atgcgccgcc agtgtcggca tcccgtcgac gcaggcgtcg cgatcgttgg tctgggctgc
     2701 ggagtacagt gtgccgacga aatcggccaa tgcccgcgcg cccatcgaca acgcggcacc
     2761 acgcaatcga tgtgcagcca aggaaaattg tttcagctca tcccgcgcca gcagatcgcg
     2821 catgcgcatc gcgtcgtcac agatgctgtc gaggaaaacg ccaagcaatg cgtcgatggc
     2881 ggcatcgtca ccgttcagcc aatggccgag tactgcgcga tcgattgtcg gagcgccgga
     2941 cctgccgtgg tctgatgcga gggtatcaag ggacatcgcg aactcccggc cgcaaccgtt
     3001 gaacgccggg gacggggatc ttagtcagcc actgcccgca accggaacac ttcgttttcc
     3061 gcgactccaa ctttggctga aggcggaacg aacgcatttc gcaccggagc acggcgggcg
     3121 cggatctgcg acagatgcgc gacgacatca tcgccggaga cggc
//
LOCUS       DATAVD010001700         1636 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2394657, whole genome shotgun sequence.
ACCESSION   DATAVD010001700 DATAVD010000000
VERSION     DATAVD010001700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2394657"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..920)
                     /locus_tag="VHX39_32600"
     CDS             complement(<1..920)
                     /locus_tag="VHX39_32600"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020590522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004368 - glycerol-3-phosphate
                     dehydrogenase (quinone) activity [Evidence IEA];
                     GO_process: GO:0006072 - glycerol-3-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HEX3995935.1"
                     /translation="MEQDQVFDIAIIGGGINGVGIARDAAGRGLSVLLVEQGDLASGT
                     SSASTKLIHGGLRYLESYQFRLVRESLAEREVLLRAAPHIIWPLRFVLPFRSGGRPWW
                     MLRAGLFIYDHLGGRHVLPPTKALDLRTDPAGEPLQSDLHRGFEYSDCWADDARLVVL
                     TARDAADRGAIILPRTRCEVAAPDDDHWNLTLSKGAVERAKVLVNAAGPSVSRVLSNV
                     VGQSAPMRVRMVKGSHIVVPRLFRHDRCYLLQNPDGRICFAIPWQGDFTLIGTTDEDF
                     SGDPIGVTISPAEVDYLCHAVSQWFRRPVTP"
     gene            complement(966..>1636)
                     /locus_tag="VHX39_32605"
     CDS             complement(966..>1636)
                     /locus_tag="VHX39_32605"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX3995936.1"
                     /translation="TVEHAANLMFRHGISGLFVVDAAGMLVGVVTEGDLLRRDELGTE
                     RHRPWWLRVLVSPGKQAADFTRAHGRKVSDIMTPEVICVAVDTPLEDVVETMEKQRIK
                     RVAATENGHMVGVVARSDLLRALLSHEREKKPQQSQADDRTIRSNILAALETASWAPL
                     TTLNVTVASGVVDIWGTITNPDERRAICVMAENVPGVKTVHDHLVFVEPYTGTVIESP
                     DDTR"
BASE COUNT          324 a          532 c          482 g          298 t
ORIGIN      
        1 ggcgtgaccg gacggcgaaa ccactggctg accgcatggc ataaatagtc gacttctgcc
       61 ggggaaatcg taacaccgat tggatcgcca ctaaaatcct cgtccgtggt gccgatgaga
      121 gtaaaatctc cctgccaggg aatcgcgaaa catattcgcc cgtcagggtt ttgcagcaga
      181 tagcaacggt catgccggaa cagcctcggc acaacaatgt ggctgccctt caccatgcga
      241 acccgcatcg gagcgctttg cccaacgacg ttggacagca cgcgcgacac cgaaggaccc
      301 gccgcattga ccagaacttt cgcgcgttcc acggcaccct tcgacagagt caaattccaa
      361 tgatcgtcgt ccggggccgc gacctcgcaa cgcgtgcgag gcaaaatgat ggcgccccgg
      421 tccgcggcat cgcgtgctgt cagcaccacg agacgtgcgt catccgccca gcagtcggag
      481 tattcaaagc cgcggtgcaa atcgctttgc aatggttcgc cggccggatc ggtccgcagg
      541 tccaacgctt tggtcggtgg caacacgtgc cgcccgccga ggtggtcgta aatgaacagt
      601 cctgcccgta gcatccacca aggtcggcct ccggagcgaa acggcagcac gaaacgcaac
      661 ggccagatga tgtggggtgc cgcccgcagc agcacttcgc gttcggccag tgattcgcgc
      721 accagacgga actggtaaga ttccaggtaa cgcagtccgc catggatcag ttttgtcgac
      781 gccgacgatg ttccgctggc caggtcgccc tgctcgacca gtaacaccga aagcccgcga
      841 ccggcggcgt cgcgagcgat cccgaccccg ttgatcccgc cgccgatgat cgcaatatcg
      901 aaaacttggt cttgttccat atgcgcaatg gcgccgtcag ggagcggccc acactgtacc
      961 gtggctcacc gtgtgtcgtc gggcgactct attacggttc ccgtataagg ttcgacgaac
     1021 accaggtggt catgcaccgt tttcacaccc ggaacgttct cggccatcac gcaaatggcg
     1081 cgcctttcgt cggggttggt gatcgtgccc cagatatcga ccactccact cgccaccgtc
     1141 acgttcagcg tggtcagcgg agcccaggat gcagtttcca aagcggcgag gatgttcgag
     1201 cgaatggtac ggtcgtccgc ctgggactgt tgcggctttt tctcgcgctc atggctgagc
     1261 aacgctcgca acaggtcgga gcgggcgacg acaccgacca tgtggccgtt ctcggtggcg
     1321 gcgacgcgct tgatgcgctg cttttccatc gtctcgacca cgtcttccaa tggcgtgtcg
     1381 acggcgacgc agatcacctc cggcgtcatg atgtcgctga ctttccggcc atgggcgcgg
     1441 gtgaaatccg ccgcctgctt gccgggggag accaacacac gcaaccacca tggccggtgc
     1501 cgctcggtgc cgagttcgtc acgccgcagc agatcgcctt cggtcacgac gccgacaagc
     1561 atgcccgcgg cgtcgaccac gaacaacccg gagatgccgt gccgaaacat caaatttgcc
     1621 gcgtgctcga ccgtct
//
LOCUS       DATAVD010001701         2844 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3322368, whole genome shotgun sequence.
ACCESSION   DATAVD010001701 DATAVD010000000
VERSION     DATAVD010001701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2844
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3322368"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            265..387
                     /locus_tag="VHX39_32610"
     CDS             265..387
                     /locus_tag="VHX39_32610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995937.1"
                     /translation="MKGLDRRFAAGVRIPLILIIPFRPIVITVSGDRDHAVHSA"
     gene            820..1287
                     /locus_tag="VHX39_32615"
     CDS             820..1287
                     /locus_tag="VHX39_32615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host attachment protein"
                     /protein_id="HEX3995938.1"
                     /translation="MPGLQKLLFVIADGEHVRFVRPTEDNALLSDAAADSFAAHQRSS
                     DLGSDHPGASYHTGSSAHHALAPRHDNHVLEKEKFAGFVAERLNAAGAAKAFDELVIV
                     APPHILSVICQDLDIATDAKVIGMLAKDLVKTPDSELWPHVRQWVRPVRRAAS"
     gene            1306..1887
                     /locus_tag="VHX39_32620"
     CDS             1306..1887
                     /locus_tag="VHX39_32620"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEX3995939.1"
                     /translation="MTWVKALGRSYLYTQTVWREGQQFRKGDPVMATTAVPIKPSAPV
                     ASVDIRHLFHSEMNWLFDVFTRRFGVPPFFPIRLDPSLSRSSPAVDITEKDDAFVLSA
                     EMPGMAEQDIRVSLSEDMLTIAGEKRRSRKERAENRYLSERNDSGFQRVFSLPDDVDR
                     ETIAASFDNGVLTVNLPKSAKAAPRKIEIKAAA"
     gene            2190..2669
                     /locus_tag="VHX39_32625"
     CDS             2190..2669
                     /locus_tag="VHX39_32625"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX3995940.1"
                     /translation="MTLTAADIMTKKVVTAHPNDSVAKVARLLSDHQISAVPVCDAQG
                     SVLGMLSEGDLIRPFGTDNVSRRAWWLNLLAEGTELAPSFLDLLRIENHPAREMMVAP
                     AITATADTPVPVLADLLSRHHIKRLPILDDGKLVGIVSRADLVHAIARTPDVITESI"
BASE COUNT          552 a          867 c          844 g          581 t
ORIGIN      
        1 ccggcgtatc tgaattttat cttaacgaat cgttcatgcg ggttacccca atttgtccga
       61 tccaccagtt tggtggacct aaggccccgg ggatcaaata aatcggaggg tgtaaaccag
      121 aaggaccagt cgggttcagg ccaatacggc ctgaaggtgg ggtcaccttt cgttaacact
      181 cgcgggggaa ggcattctta ccccgtcagg tgtcgttgcg gacgccaagg caggctttaa
      241 ggcggatgag cgggatgcag atagatgaag ggtctggata ggcggtttgc ggccggcgtg
      301 cggattccgc tgatcctgat catcccattc cgcccgatcg tcatcactgt ttccggtgat
      361 cgcgatcacg ctgttcactc cgcctgagca gggcgcggtg aacagcgtga cgtgacgtcg
      421 ggcgactacc actgacggct aaataggtgt catctcccct tgacgttcgt caagccttcg
      481 accgcggcaa gagtctgacg tttgcggagg ctctctccct tcagctcgat acagtgcgag
      541 cggtgaatga caccgccgcc gtcgcgaggc catcttgccg accttcgccg cgatggcgct
      601 ggcaactacc gcaatgctca ataccctggt cgtttcgcac tggaggtgag tgtgcacggc
      661 ttctgaagac ctgagatggc cctgctaccg gggcgtcgtg ccgatggccc catccgcacc
      721 gtgccttcgc ctcgccggtc cttgacccat atcaatgcgg accgctcgcg cccggcgcat
      781 tcttccccga acaccatcag actagaaaag gcgttcggca tgcctggtct tcaaaaactg
      841 ctgtttgtga ttgccgacgg cgagcatgtc cgtttcgtcc ggccgactga ggacaatgca
      901 ctgctcagcg acgccgcggc ggattcgttt gccgcacacc agagatcgtc agacctcggg
      961 tcggatcacc ctggcgcgtc ctatcatacc ggttcgtccg cacatcatgc tctggcccca
     1021 cgacacgata accacgtgct ggaaaaggag aagtttgccg ggttcgtcgc cgaacgactg
     1081 aacgcagcag gtgctgcgaa ggcattcgac gaactggtca tcgtggcccc gccgcacatc
     1141 ctcagcgtca tctgtcagga cctggacatc gcgaccgatg ccaaagtcat tggcatgctg
     1201 gcgaaggatc tggtcaagac gccggacagt gagctgtggc cgcatgtacg ccagtgggtt
     1261 cgtcctgtgc gccgcgctgc gtcttgatat cctctcgcgt tgggtttgac ctgggtcaag
     1321 gcgcttggtc gttcgtatct gtatacacag accgtctggc gagaaggcca gcaattccgc
     1381 aaaggagatc cagtcatggc aacgactgcc gttccgataa aaccatccgc gccagtcgcc
     1441 agcgtcgaca tccggcactt attccattca gaaatgaatt ggctgttcga cgttttcacg
     1501 cgccgcttcg gcgtgccgcc gttctttcca atccgtctcg acccttcatt gagccgttcg
     1561 tcccccgcgg ttgatattac ggagaaggac gatgcatttg tcctcagcgc tgaaatgccc
     1621 gggatggccg agcaggacat ccgggtttcg ctgtctgaag atatgctgac gatcgcgggc
     1681 gaaaagcgtc gatcgcgcaa agagcgagct gagaaccgat atctgtcgga gcgtaacgac
     1741 agcgggtttc aacgtgtctt ctcgttgcct gacgacgttg accgcgaaac catcgcggca
     1801 tcgttcgata atggcgtgtt gaccgtgaac ttgccaaaat cggcaaaagc cgcgccacgg
     1861 aaaatcgaaa taaaggccgc cgcctgaggt gctcatcggg gcagcggcga gacacgtttc
     1921 gtccgcgttc cccaggatcc ggagctgaac atgttaggta tcacactcgc gcctgagcag
     1981 atcatgcagg ctccgccgga ggttcgccga tggatcgagc agcaggtcgc cggcgctttc
     2041 ggattgtcgc ggcctgcgcc ggttgtcgag ccaccgtgcc ggcatcggcg atcgatggcc
     2101 ctcggcaaag cgagacaaca gcttaacccc gcaacccgcg gaaggcttcc gccagccggc
     2161 gcgagccgca cccgtgtgag gaggtatcca tgacactcac cgccgccgat atcatgacca
     2221 agaaggtcgt aacggcccat cccaacgatt ccgtggcgaa agtcgcaaga ttgctcagcg
     2281 accatcagat cagcgctgtt cccgtctgcg acgcacaagg gtcggtgctt ggcatgctga
     2341 gcgagggtga tcttatccgg ccattcggga cggataacgt ctccaggcgc gcctggtggc
     2401 tcaatctgct ggccgaaggc actgaactcg cgccatcctt ccttgatctc ctgcgtattg
     2461 aaaaccatcc tgcgcgtgag atgatggttg cgccggccat taccgcgaca gccgataccc
     2521 ctgtcccggt gttggccgat ctgctttcgc gccaccatat caagcgcctg cccatcctgg
     2581 acgacggcaa actggttggg atcgtcagcc gcgccgactt ggtgcatgcg atcgcccgga
     2641 cgccggacgt catcacggag tcgatctgat accaatcgcc cttgatgttg acccatcggc
     2701 accgccgtgc aaccgtcatg gcgagcgcag gctcgccgtc catgtctttg tttccgctcg
     2761 taaaaggcgt ggataccggc atgcgccggc atgacgggac ggggtcaacc ggcgtgacgg
     2821 gacggggtcg accggcttga cgga
//
LOCUS       DATAVD010001702         3873 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_347037, whole genome shotgun sequence.
ACCESSION   DATAVD010001702 DATAVD010000000
VERSION     DATAVD010001702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3873
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347037"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..547)
                     /locus_tag="VHX39_32630"
     CDS             complement(<1..547)
                     /locus_tag="VHX39_32630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006558208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="squalene--hopene cyclase"
                     /protein_id="HEX3995941.1"
                     /translation="MVANTALDDSIAAAADALKRRRHADGHWVFELEADATIPAEYVL
                     LEHFLDRIDPPLQAKIGCYLRGIQGAHGGWPLFHDGAFDISASVKAYFALKAIGDDPE
                     APHMRRAREAILAAGGAERTNVFTRAQLALFGQVPWRAVPVMPLEIMLLPQWFPFHLS
                     KVSYWSRTVIVPLLVLMAKRPL"
     gene            complement(552..1850)
                     /gene="hpnE"
                     /locus_tag="VHX39_32635"
     CDS             complement(552..1850)
                     /gene="hpnE"
                     /locus_tag="VHX39_32635"
                     /EC_number="1.17.8.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxysqualene dehydroxylase HpnE"
                     /protein_id="HEX3995942.1"
                     /translation="MSKVHVIGAGLAGLSAAITASGAGHAVTLYEATAAGGGRCRSYF
                     DTELGIRLDNGNHLLLSGNTSAFSYIDEIGARDRFTGPRNPIFPFMDLKTGRKWTLRP
                     NRGRIPWWVLFADRRVPRTTASEYPQIRQLGRAWNDTVMAEAMRHSSLYWLLLEPLSI
                     AALNTQPHEALACLFGSVLRETLLKGGNACLPRVPKEGLSEALIDPAIATLRERGADI
                     RFNCRITRLVVEQDSVVALGTQDGQVAVDTNDFVVLAAPSWVAGELVQDITVPNAFES
                     ILNVHFKVSVQSGPHVAEAGFIGLVNGTAEWIFVRPDRVSITVSAANKLIDRPADELA
                     VAVWRDVVKALDLIGQQADLPPFRVVKERRATIVANLVQEERRPGAETGIGNLVLAGD
                     WTDTRLPGTIEGAIRSGVTAAELALRSAKSAKQRVVANVE"
     gene            complement(1912..2406)
                     /locus_tag="VHX39_32640"
     CDS             complement(1912..2406)
                     /locus_tag="VHX39_32640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX3995943.1"
                     /translation="MEAIVHPDGRLIWRGQTLRCALGQGGVRVEKEEGDGTTPAGLLP
                     LRRVFYRADRVPPPRSPLPIEPIAQTDGWCDDPSHRDYNRFVHLPHDARHEELWRRDE
                     AYDVVAVLGWNDQPVVKDRGSAIFLHVARPDYAPTEGCVALALPDLLRILADGVTMLR
                     VLGH"
     gene            complement(2422..3432)
                     /locus_tag="VHX39_32645"
     CDS             complement(2422..3432)
                     /locus_tag="VHX39_32645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007398606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein"
                     /protein_id="HEX3995944.1"
                     /translation="MNDIPRAATVDEVPILDLTPLLEGGDIGPLAAELRHACETIGFF
                     YVQHHGVPQPVIDDVFAATRRYFDLPLEERLQMKIDDRFRRGFMPQGINQHPGFAPDL
                     KESYELALDLPLDDPDVVAGLPLHGPNRWPEAHPWLRQAADAYFAETLALGKRLLRLF
                     AASLALPEDFFLRYCRKPMVQTRLFHYPPSVANAVDEGAFGVAPHTDYGMITLLTQDA
                     IGGLELRKRDGEWVGAPFIPGTFVINLGDMFKVWTNDLYVSNPHRVVNRSGRERYSIP
                     TFFNLDYDAPVACLQSCQSERNPPKHAPINSGDYLVGRFRSVQKFGRPVAELEQEAAA
                     RV"
     gene            complement(3601..>3873)
                     /locus_tag="VHX39_32650"
     CDS             complement(3601..>3873)
                     /locus_tag="VHX39_32650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEX3995945.1"
                     /translation="TLQDQGLDTMDANRVLGWGADERNFLVGANMLLALGITKVRLLT
                     NNPDKISGLTACGVEVVGREAHAFAPNEVNDAYLATKAVRFGHMLD"
BASE COUNT          763 a         1263 c         1161 g          686 t
ORIGIN      
        1 ccagcggccg tttcgccatc aacaccagca gaggtacgat gaccgtccgc gaccaatacg
       61 aaaccttcga cagatgaaat ggaaaccatt ggggcagcag catgatctcc aatggcatca
      121 ccggcaccgc ccgccagggc acctgcccga acagggcaag ttgcgcgcga gtaaacacat
      181 tcgttcgctc tgcaccaccg gcggcgagaa tggcttcccg cgcacggcgc atgtgcggcg
      241 cttctgggtc gtcgccaatt gccttcagtg cgaaatacgc tttgacgctg gcagaaatat
      301 cgaaggcccc gtcgtgaaat agtggccatc cgccgtgcgc accttgaata ccgcgcaaat
      361 agcagccgat tttcgcctgc aacggcggat cgatacgatc cagaaagtgt tcgagcagca
      421 cgtattcggc gggaattgtg gcatcggctt cgagttcgaa tacccagtgg ccgtcagcgt
      481 gccggcgccg cttcagcgca tcagcagcgg ccgcgataga atcgtcgagc gcagtgttcg
      541 cgaccatggc atcactcgac attggccaca acgcgttgct ttgccgactt tgcggaacgc
      601 agggctagct cagccgcggt tacgccagat ctgatcgcac cctcgatcgt ccccggcagc
      661 ctcgtgtccg tccaatcgcc cgccagcact aaatttccaa tacccgtctc cgcccctggg
      721 cggcgttctt cctggacgag gttggcgacg atcgtcgcgc gtcgctcctt aaccacccgg
      781 aatggtggca ggtccgcctg ttgtccgatc aggtcgagcg ccttcacgac atcacgccaa
      841 accgccacag caagctcgtc cgccggccga tcgatcagtt tgttcgcggc actgacggtg
      901 atcgagacgc ggtcgggccg cacaaaaatc cattcggcgg tgccgttgac cagaccgatg
      961 aacccggcct cggcgacgtg cgggccggat tgcaccgaga ccttgaaatg cacattcagg
     1021 atcgactcga atgcgttcgg taccgtaatg tcctgcacaa gttccccagc aacccaggat
     1081 ggcgcggcca gcaccacaaa gtcgttcgtg tcgacggcaa cctgcccgtc ttgggtccca
     1141 agcgcgacga cgctgtcttg ctccacgacg agccgggtga tccggcagtt gaaccgaatg
     1201 tccgcgccac gctctcgcag tgtcgcgatg gcaggatcga tcagagcttc cgacaaaccc
     1261 tccttcggta cgcgcggtaa acaggcgttg ccccccttca acaatgtctc ccggaggacc
     1321 gaaccgaaca aacaggccag cgcctcgtgt ggctgcgtat tcagcgccgc gatcgataat
     1381 ggctccagca acagccagta tagggagctg tggcgcatcg cctcagccat gacagtatcg
     1441 ttccacgccc ggccaagctg gcggatctgt gggtactcgc tcgcggtcgt gcgggggacg
     1501 cgccggtcag cgaacagcac ccaccagggg atccgcccgc ggtttggccg tagcgtccac
     1561 ttccgtccgg ttttgagatc cataaatggg aagatcgggt tgcgtggccc ggtgaaccgg
     1621 tctcgtgcac cgatttcgtc gatataggaa aaggcggacg tatttcccga cagcagcaga
     1681 tggttcccgt tgtccagacg tatgccaagt tccgtatcga aataggaccg gcaccgcccg
     1741 ccgcccgccg cagtggcttc gtacagggtc accgcatggc ccgcaccgct cgccgtgatg
     1801 gcagccgaga ggccggcgag accggcgccg atgacatgaa ctttgctcat accaacagat
     1861 gtttgccgaa atcgggccag cttcgcaatt ggtcgccccg ccagccggcg gtcagtgccc
     1921 gagcacgcgc aacatggtca cgccgtcggc cagaatgcgc aacaggtcgg gcaacgccag
     1981 ggccacgcag ccttcggtcg gagcgtaatc cgggcgtgcg acatgcaaga agattgccga
     2041 tccgcgatcc ttgaccaccg gctgatcgtt ccaccccagc acggcgacaa catcatacgc
     2101 ctcgtcccgg cgccacagtt cctcgtgccg cgcatcgtgt ggcagatgca cgaagcggtt
     2161 gtaatcccga tgcgaaggat cgtcgcacca accgtcggtt tgcgcgatcg gctcgatcgg
     2221 caacggagac cgaggcggcg gtacgcggtc ggcccggtaa aagacacggc gcaacggcag
     2281 gaggccagcg ggcgtggtgc catcgccttc ctccttctca acccgtacgc cgccttgacc
     2341 gagggcgcac cgtaacgtct ggccgcgcca aatcagccgg ccatcgggat gaacaattgc
     2401 ttccacgggc gcttcctttg gtcagacccg agcggcggcc tcttgctcca gctccgccac
     2461 cggacggccg aacttctgca cgctacggaa ccggcccacg agataatcac cggagttgat
     2521 gggtgcatgt ttcggcgggt ttcgctccga ctggcagctc tgcagacaag cgaccggcgc
     2581 gtcgtagtcg agattgaaga aggtcgggat cgagtaacgc tcgcgcccgc tgcggttcac
     2641 cacgcgatgc gggttcgaga catagagatc attcgtccac accttgaaca tgtcgccgag
     2701 attgatcacg aaggtgccgg gaatgaacgg cgcgccaacc cattcgccat cgcgtttacg
     2761 cagttccagt ccaccgatcg cgtcctgtgt cagcaatgtg atcatcccgt agtcggtgtg
     2821 tggcgccacc ccgaatgcgc cctcgtccac cgcattggcc accgacggag gatagtggaa
     2881 caggcgggtc tgcaccatcg gcttgcggca atagcgcagg aagaagtctt ccggcagcgc
     2941 aaggctggcg gcaaacaacc gcagcagacg ctttccgagc gcaagcgtct ccgcgaaata
     3001 cgcgtcggcg gcctggcgca gccacggatg cgcctcgggc cagcggttcg ggccgtgcag
     3061 tggcagaccg gcgacgacat cagggtcatc gagcggcaga tcaagcgcca gctcgtaact
     3121 ttccttcagg tccggagcga acccgggatg ctgattgatc ccttgcggca tgaagccgcg
     3181 gcggaaccgg tcgtctatct tcatttgcaa ccgctcctcg agcggcagat cgaaatagcg
     3241 gcgcgtggca gcaaacacgt catcgatcac cggctgcggt acaccgtggt gttgcacgta
     3301 gaagaatccg atcgtctcgc acgcgtgccg cagttccgcc gcgagcggac cgatgtcccc
     3361 gccctccagc agtggagtga ggtcgaggat cggcacctca tcgacggtcg cagcgcgcgg
     3421 aatgtcattc atcccgttgg tctccgggta gcgtgttcag gcgttgcgtg tcggcacggc
     3481 gcgaacctgt cctgtacggg ttatcggtag aacgtgccat ctactcgaag gccggcaagc
     3541 cgtacgtggg cgccaggtcc ggcaatgacg gcaaggctgc tttcgagcca aaccaggact
     3601 ctaatcgagc atatgcccga agcgcaccgc cttggtcgcg aggtacgcgt cattcacctc
     3661 gttcggagcg aaggcatgcg cttcacggcc caccacctca acgccgcacg ccgtcagccc
     3721 agaaatctta tccggattgt tggtcagcag cctgaccttg gtgatgccca atgccagcaa
     3781 catgttggca ccaacgagga agttgcgctc atccgcgccc cagcccagca cgcggttggc
     3841 atccatcgtg tccaggccct gatcctgcaa cgt
//
LOCUS       DATAVD010001703         2963 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2395220, whole genome shotgun sequence.
ACCESSION   DATAVD010001703 DATAVD010000000
VERSION     DATAVD010001703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2963
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2395220"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..872)
                     /locus_tag="VHX39_32655"
     CDS             complement(21..872)
                     /locus_tag="VHX39_32655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995946.1"
                     /translation="MPMLIATLCLSLAACQAPVTGPGATLAADATDPCQNERTAFASS
                     KTYFQDQIVSGAVTGAAIGAGLGALTGLAATGNWRGALIGGLAGGAVGGVAGGSSAYY
                     NTLAEHAQDQNELAYDMNQDLTRETQEIDHTAAAFGRLRACRFGQAEFVKEQAREHVI
                     DRQTALARIAYHRDKFNEELNIAHQFGLTMARRSQEFQQAANDLRTRQPVAPQGAPTS
                     APTTRSAPAAPARVAQVDQAATVSVPEKRQSFDNTVAAAQTSSKAAFDLDNNEKLSLL
                     LPSGPDA"
     gene            complement(1412..2347)
                     /locus_tag="VHX39_32660"
     CDS             complement(1412..2347)
                     /locus_tag="VHX39_32660"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
                     /protein_id="HEX3995947.1"
                     /translation="MRIGIVTPAFNVAPYIGDAIRSVLAQTHGCWTMTIVDDGSTDQT
                     AAVAAGFDDPRIRLINQCNAGVSAARNHGLAATDAEAVLFLDADDWLSPDALCVLAAA
                     LRASPDAIAAVGPYQRAPNGKAEGVGPVSRPVSGDLLEALLVRNLFANGGHVLIRRHA
                     LEAAGPFDPGLSYGEDWEYWIRLALIGPFAVACPREAVLFVRERLDSAYRSMAARPEA
                     FVPCMNAIFNAPGLQSRVGAVALARLRRRAEAENDWIVGRELIRHGKVAEGRRFLRRS
                     VKAAPGVRRLALLASASLPMLRIGPFRSYPMPGTV"
     gene            complement(2626..>2963)
                     /locus_tag="VHX39_32665"
     CDS             complement(2626..>2963)
                     /locus_tag="VHX39_32665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HEX3995948.1"
                     /translation="GLVTVADMLEAIVGDPADTAAQPAEPGGEGESSLVMDGMMPVDE
                     AKARLSLPDLPGEGTYHTLAGLLLALLRRVPRQGDRIVFAGWRFEVLAMDGRRVEKVL
                     ARPEPAAEG"
BASE COUNT          527 a          998 c          899 g          539 t
ORIGIN      
        1 ccagcagcat cgccagaagt ttacgcatcc ggcccggatg gcagcagcag gctcaacttc
       61 tcattgttgt cgagatcgaa ggcagcctta ctgctggtct gggctgcggc gacggtgttg
      121 tcgaagctct ggcgtttctc gggcaccgac actgtcgcgg cctggtccac ctgagccacc
      181 ctggccggcg ccgccggcgc ggagcgggtc gtgggcgcac tggtgggcgc cccctgtggt
      241 gcaaccggct gccgcgtccg caggtcattg gccgcctgct ggaattcctg gctccggcgg
      301 gccatcgtca gtccaaattg gtgcgcgata ttcagttcct cattgaactt atcgcgatga
      361 taggcgatcc gcgcgagtgc cgtctgccga tcaatcacgt gctcgcgcgc ctgctccttc
      421 acaaactccg cctgaccgaa ccggcacgcc cgtaagcgcc cgaaggcggc tgccgtgtgg
      481 tcgatctcct gcgtctcgcg tgtcaggtcc tggttcatgt cgtaggcgag ttcgttctgg
      541 tcctgcgcgt gctcagccag agtattgtaa taggccgaac taccgcccgc gacgcccccg
      601 acggcgccgc ctgccaggcc gccaatcaag gcaccgcgcc agttcccggt cgctgccagc
      661 ccggtcagag cgccaagccc ggcgcctatc gctgctccgg tcacggcacc ggagacgatt
      721 tggtcctgga agtatgtctt ggagctggcg aacgcggtcc gctcattttg gcaaggatcg
      781 gtcgcatctg ccgcgagggt ggcgccaggc ccggtaacgg gtgcctgaca ggccgccaaa
      841 ctgagacaca gcgtggcgat gagcataggc acggtggagg cccgaacgag gcgggcacgg
      901 gtagaaggtc gcatcttccc tcgcaacggt tttatcggcc ggggtgacat cccgggccaa
      961 ggtggaattc atgacggaag cgtgtacggt agctgacgtt cgcctcataa actgggacaa
     1021 ttacacaatc gtggcaaatg ttttcgtgac gtgtgccgaa tggcgcgcaa ccctcggcgt
     1081 gcccgagcca tggctcgatg gaatttcact cggtcgcaat taacctgacg tcgcacctgg
     1141 cgtgctttgc ccgatctgcc ggaagcggtg atgcgcttat cccgggtggc accaaccgta
     1201 ctgctctgcg gatccaatcg ccgagccaga gcgtcagcct gatcgctcgt gggttgtcat
     1261 atcgccgaac gaccgcatcg accggaccga cctgccattt ccctgaggat cagcgacgtg
     1321 ctgccgcagt tccccttggt ccaggcgcgt cccgccattg ccacactgat caactcgatc
     1381 gatagccacc gctgatcgcg cagcccggat atcagaccgt gcccggcatc ggatacgatc
     1441 gaaacggccc aatccgcaac atcggtaatg atgctgaggc cagcaatgcc aggcgcctga
     1501 cgcctggtgc cgccttgact gagcgacgga ggaatcttcg cccctctgcg accttgccat
     1561 gccggatcaa ctcgcgtccg acgatccagt cgttttcggc ctcggcgcgc cgtcgcaacc
     1621 tcgcgagggc cacagcgccc acgcgagatt gcaatcccgg tgcgttgaag attgcgttca
     1681 tgcacggaac aaacgcctcc ggccgcgctg ccatgctgcg atacgcactg tcgagccgtt
     1741 cccgcacgaa cagtaccgcc tcacgcgggc aggctacggc aaatgggcca atcagagcga
     1801 ggcgtatcca atattcccag tcctcaccgt agctgagacc agggtcgaac ggaccggctg
     1861 cctccagcgc atgccgacgg atcagcacgt gaccgccatt ggcgaacagg ttgcggacca
     1921 gcaacgcctc cagcaggtcc ccggataccg gccgcgaaac gggtcctacc ccttcggctt
     1981 tgccattcgg ggcgcgctga tacggaccga ccgccgcaat cgcgtcggga gaagcccgca
     2041 gcgccgccgc cagaacgcac agtgcgtctg ggctcagcca gtcatcggcg tccaggaaca
     2101 gcaccgcttc cgcgtcggtt gctgccagtc cgtggttgcg cgctgcggag actccggcgt
     2161 tgcactggtt aatcagacga atgcggggat cgtcgaagcc agcagcgacg gcggccgtct
     2221 ggtcggtgga cccgtcatcc acgatggtca tcgtccagca gccgtgagtt tgcgccagga
     2281 ctgatcggat tgcgtcaccg atataaggtg cgacattgaa ggcgggtgta acgatgccga
     2341 tgcgcatagg ccttacctcc cgcaagccat cgtttttgga gccggcaacc agccttttca
     2401 gccctggccg tccagaccgt tgacgcggcg aaccgcccgg tgctggaccc gcaaagcggg
     2461 gccacgcctt cgaacttttc ccgagcctaa tattgaaggg ttaacgggag gctaatgtcg
     2521 ctgtcccgca gattggcatt tggcgacgcc tggcgccctt gccgagtcaa actgcttggt
     2581 cgcatctgac atcgatcgcg ctccggtgca aaaccggcgg ccggcctacc cctcggccgc
     2641 aggctccggc cgtgcaagga ctttttccac tcgccttcca tccatcgcca gcacttcaaa
     2701 ccgccagcca gcgaacacga tccggtcgcc ctgcctgggc acccgtcgca acagcgccaa
     2761 cagcagaccg gcgagcgtat gataagtgcc ctcgccaggc agatcgggca acgacaggcg
     2821 ggcctttgcc tcgtcgaccg gcatcattcc gtccatgacg aggctgcttt caccttcgcc
     2881 accgggctcc gccggctgcg ccgcggtatc agccggatcg ccgacaatcg cttccagcat
     2941 gtcggccacc gtcaccagac ctt
//
LOCUS       DATAVD010001704         2547 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2768833, whole genome shotgun sequence.
ACCESSION   DATAVD010001704 DATAVD010000000
VERSION     DATAVD010001704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2547
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2768833"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(181..942)
                     /gene="istB"
                     /locus_tag="VHX39_32670"
     CDS             complement(181..942)
                     /gene="istB"
                     /locus_tag="VHX39_32670"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEX3995949.1"
                     /translation="MVELQEQAIRQHCKALRMPTIGTQFSRLADAASREGQSHLGYLE
                     ALLAAEMEERESRVITRLLHEAKLPRMKTLDGFEFDRSGVSAAQLRTLAEGDYVTKAE
                     PVLLVGEAGTGKTHLATGLCVAACRQRRRVRFTTAAALINELAEAAHANQLSRALGRW
                     ERLDLICIDELGYVPLAETACELMFQVIADRAEKAAVIVTTNLPFSEWSQVIPNPRLC
                     KALIDRLTDQAHIITTGADSYRFRRTSAQRKAAKS"
     gene            complement(942..2465)
                     /gene="istA"
                     /locus_tag="VHX39_32675"
     CDS             complement(942..2465)
                     /gene="istA"
                     /locus_tag="VHX39_32675"
                     /inference="COORDINATES: protein motif:HMM:NF033546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEX3995950.1"
                     /translation="MDLFEQLRREHEFGIGTIVGVAAKFGVHRRVVRQAIGSALPPKH
                     RYPPRARPKLVAVADFIDKVLDADRSAPRKQRHTARRLYHRILTEFPGVTVAESTVRN
                     HIRERKHQMGLLRRETFVPQSYSWAQEAQVDWYEAWVDLGDERTKVQVFAMRSMASGA
                     AFHRAYLHATQQAFLEAHEHAFACFGGVFHLLRYDNLASAVRKILRGYRREETVRFMA
                     FRSHWRFAAEFCTPGEGHEKGGIEGEGGYFRRNHLVPVPQVVDLDALNTMLVAACRAD
                     EARVLTGRNETIGAAMAVERGHLVSCATEGLDLAEVVFPLVDKQGCVTVKTNFYSVPV
                     RAGTRVEARIYPLHVEIWHAGRLIARHERCHGRRQHVLDLEHYLDVLSHKPGAFAGSK
                     PLAQWREAGRWPDCYDELWTRLQRRHGKQNGTRAMVAVLALGQEFGHDRLRTAVASTV
                     SLGACDVAAVRYLLTEAGLHKARPAPIDVGALARYDRPVPNVADYDTLLSGPCAGTA"
BASE COUNT          433 a          883 c          793 g          438 t
ORIGIN      
        1 tctgcaacca ggtccacgtg ctgctcgatt gaggtaatca tattgctttt caccgagggg
       61 ctgccgggac cggtgatcat tgtctgtgac aatgaatatt ggcccacccc cggtgtttga
      121 tctgctgagc cgggccgagg cccggctcag cagatcggcg tcattcctgg ctccttcccg
      181 tcatgattta gcggccttgc gctgcgccga ggtacggcgg aaccgatagg agtcggcgcc
      241 ggtggtgatg atgtgggcct ggtcagtgag ccgatcgatc agcgccttgc acagccgcgg
      301 attggggatc acctgcgacc actcggagaa cggcaggttg gtggtcacga tcaccgctgc
      361 cttctcggcg cggtcggcga tcacctggaa catcaactcg caggcggtct ccgccagcgg
      421 cacgtagcca agttcgtcga tacagatcag gtcgagccgt tcccaccggc ccagcgcgcg
      481 gctgagctga ttggcatgcg ccgcctcggc cagttcgttg atcagcgccg ccgccgtggt
      541 gaaccgcacc cggcgacgct ggcggcaggc ggcgacacac agccccgtcg ccagatgggt
      601 ctttcccgtt ccggcctcgc cgaccagcaa aaccggctcc gccttggtca cgtaatcgcc
      661 ctcggccaac gtgcgcagtt gcgccgccga gacgccggag cggtcgaatt cgaacccgtc
      721 cagcgtcttc atccgtggca gcttcgcctc gtgcagcagc cgggtgatca cccggctctc
      781 ccgctcctcc atctcggccg ccaacaacgc ctcgaggtag ccgaggtggg attgtccctc
      841 gcggctggct gcatcggcca gacgggagaa ctgcgtgccg atggtcggca tccgcaacgc
      901 cttgcagtgc tgacggatgg cctgctcctg aagctcgacc atcacgcggt ccctgcgcac
      961 gggccagaca gcagcgtgtc gtagtcagcg acattcggca ccggccgatc gtagcgggcc
     1021 aatgcaccga catcgatcgg cgcgggcctg gccttgtgca gtccagcctc ggtcagcaaa
     1081 taccgcaccg ccgcaacgtc gcaggcgccc agcgacaccg tcgacgcgac cgccgtgcgc
     1141 agccggtcgt ggccgaactc ttggcccagc gccaggacag ccaccatggc gcgggtgccg
     1201 ttctgcttgc cgtgccgcct ttgcagccgc gtccagagct cgtcatagca gtccggccaa
     1261 cgacccgcct cgcgccattg cgccaacggt ttcgatcccg cgaacgcgcc gggcttatgg
     1321 ctcagcacgt cgaggtaatg ctcgaggtca aggacatgct ggcggcggcc gtgacaccgt
     1381 tcgtgccgtg cgatcagccg gccggcatgc cagatctcga cgtgcaacgg ataaatgcgc
     1441 gcctccaccc gggtgccagc gcgaaccggc accgagtaga agttggtctt caccgtgacg
     1501 cagccttgct tgtcgaccag cgggaacacg acctccgcca gatcgaggcc ttcagtggcg
     1561 catgacacca gatggccgcg ctcgaccgcc atggccgcac caatcgtctc gttgcgcccg
     1621 gtgagcaccc gagcctcgtc ggcacgacag gctgcgacca gcatggtgtt gagcgcatcg
     1681 aggtcgacga cttgcggcac cggcaccaaa tggttgcgac ggaaataacc gccttcgcct
     1741 tcaatgccac ccttctcatg gccttcgcca ggcgtgcaga attcagcggc aaaccgccag
     1801 tgcgagcgga acgccatgaa ccgcaccgtc tcctcccgcc ggtagccgcg caggatcttg
     1861 cgcaccgcgc tggccaggtt gtcatagcgc agcaggtgga acacgccgcc gaaacaggcg
     1921 aatgcatgct cgtgtgcctc caggaacgcc tgctgcgtcg cgtgcaggta ggcacggtgg
     1981 aacgccgccc cgctggccat cgagcgcatg gcaaagacct gcaccttggt ccgctcatcg
     2041 ccgaggtcga cccaggcttc ataccagtcg acctgcgctt cctgagccca actgtagctt
     2101 tgcggcacga acgtctcccg ccgcagcagg cccatctggt gtttgcgctc gcggatgtgg
     2161 ttgcgcactg tcgattcagc gaccgtgacc ccagggaatt ccgtcaggat gcgatgatac
     2221 agccgccggg cggtgtggcg ctgcttgcgc ggtgcggaac ggtccgcatc cagcaccttg
     2281 tcgatgaagt cggccaccgc gacaagcttc ggcctggccc tcggcgggta gcgatgcttc
     2341 ggcggcagcg cgctgccgat cgcctgacgc acaacccgcc gatgcacccc gaactttgcc
     2401 gccacaccca cgatcgtgcc gatcccaaac tcatgctcgc gacgaagctg ctcgaataaa
     2461 tccactttgg ctctccagtc cacgccaggt cccccgatcc gatcggggcg accctaggtt
     2521 gaggggctgg gggtgggcca aaattcg
//
LOCUS       DATAVD010001705         1730 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1461777, whole genome shotgun sequence.
ACCESSION   DATAVD010001705 DATAVD010000000
VERSION     DATAVD010001705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1461777"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..636
                     /locus_tag="VHX39_32680"
     CDS             <1..636
                     /locus_tag="VHX39_32680"
                     /EC_number="5.4.99.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose synthase"
                     /protein_id="HEX3995951.1"
                     /translation="AKDFLFSLLSGPQTELHAFVEKIAPAGAVNGLAQTVLKMTVPGM
                     PDFFQGTEFWDFSLVDPDNRRPVDYKSRREATGQSWRNGHIKQDVIRKVLKLRRQAPD
                     LFARGDYSPLTVKGPLEDHVIAFTRSLGQSALIVVVPRLVYRLMQDGDRLTLDPDCLR
                     GNTLLLPEHLHGCVLHPVLARGETLTAGSELPLLPLLTHCPTAVWTTIEST"
     gene            722..1024
                     /locus_tag="VHX39_32685"
     CDS             722..1024
                     /locus_tag="VHX39_32685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995952.1"
                     /translation="MILKSRSLLLAAALMAAPLSVALAQGTTPGVTTGSNGTSAESTT
                     APKAPPSAAATDPYVKGATGQTVVKGSGSSMAGSSRVVPDPNAASTTAGGAGGGGH"
     gene            complement(1041..1496)
                     /locus_tag="VHX39_32690"
     CDS             complement(1041..1496)
                     /locus_tag="VHX39_32690"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX3995953.1"
                     /translation="MGLPRADDATKAWFVAWLEGFSAHVRAVDYASARPLFHPEILAF
                     GTHQDVLPSLEAWVNTQWDNVWPKTDDFRFNIAETHVLVSDDGSMAVVIAPWTSTGFH
                     PDGTSFDRPGRATIVFHKAAGRWLGVHSHLSLNRGVAQSSHGNRPVKAR"
     gene            complement(1508..>1730)
                     /locus_tag="VHX39_32695"
     CDS             complement(1508..>1730)
                     /locus_tag="VHX39_32695"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995954.1"
                     /translation="AASPPGAFGRVFGIVTTGFNIGGTLGPLIGGWIMDHNLPRWVFF
                     SSVLFMGLTSVMALASDWRSRRRSALVLS"
BASE COUNT          347 a          613 c          483 g          287 t
ORIGIN      
        1 gccaaggact tcctgttcag cctgctctcc ggcccccaaa cagagcttca tgcgttcgtc
       61 gaaaagatcg cccccgccgg cgcggtgaac gggctggcac aaacagtgct gaaaatgact
      121 gtcccgggaa tgcctgattt ctttcagggg acggagttct gggatttcag cctcgtcgac
      181 cccgacaatc gccggccggt cgactacaag tcccgccggg aagccaccgg acaatcctgg
      241 cgcaacggcc atatcaaaca ggatgtgatc cgcaaggtgc tgaaactgcg ccgccaggcc
      301 cccgatctgt tcgcacgcgg cgattacagc ccgctgacgg tcaaaggtcc actggaagac
      361 cacgtcatcg cctttacccg cagcctcggc caatccgcgc tgatcgtcgt cgtgccgcgc
      421 cttgtgtacc gtcttatgca agacggcgac cgcctcacgc tcgatccgga ctgcctgcgc
      481 ggcaacactc tacttctgcc ggaacatttg cacggttgcg tgttgcatcc tgttctggcg
      541 cgcggcgaaa ccctgaccgc cggctcggaa ctcccgcttt tgcccctgct tacgcactgc
      601 ccgacagcag tatggacaac gatcgaatcg acgtgatgcc gcgctgcggg atgcgctccc
      661 atgcgttctt tcgacatcac cgccatggat gttccggcgg tttgtttcga aaggcaatac
      721 catgatcttg aaatcccgat ctttgctgct tgccgcggcg ttgatggccg ccccgctgag
      781 cgttgcgctg gcgcagggga cgaccccagg cgtcaccaca ggatcaaacg gcacatcggc
      841 tgaatcgacg accgccccga aggcccctcc gtcagccgcc gcgaccgatc cctacgtcaa
      901 gggcgccacc ggtcagacgg tcgtcaaggg ttcgggcagc agcatggccg gctccagccg
      961 cgtcgtgccc gatcccaacg ccgcttcgac gacagccggc ggcgccggcg gtggcggcca
     1021 ctaaccaaca agccgcccgg tcaacgagcc ttgaccgggc ggttgccgtg actggactgc
     1081 gcaacgccgc ggttcaacga caggtgcgaa tgcacgccaa gccacctacc ggcagccttg
     1141 tgaaacacga tcgttgcacg acccggccgg tcgaatgacg tcccgtccgg gtgaaacccc
     1201 gtacttgtcc atggcgcgat aaccaccgcc atgctgccgt cgtccgagac cagaacatgc
     1261 gtctccgcga tgttgaaacg gaaatcgtcc gtcttcggcc acacattgtc ccactgcgta
     1321 ttcacccacg cctcaaggct cggcagcaca tcctgatggg tgccgaaggc caggatttcg
     1381 ggatgaaaca gcggacgggc cgaagcataa tccaccgccc gcacatgcgc ggaaaacccc
     1441 tccagccacg cgacaaacca ggccttcgtt gcgtcatcgg cgcgcggcaa ccccattcga
     1501 atacccttta cgacagcacc agcgccgacc gccggcgcga tcgccaatca ctcgccagcg
     1561 ccatgacaga cgtcaacccc atgaacagca ccgaggagaa aaatacccat cgcggcagat
     1621 tgtgatccat gatccagccg ccgatcagcg gccccagcgt gccgccgata ttgaacccgg
     1681 tcgtgacgat cccgaacacc cggccaaacg cccccggcgg tgacgcagcc
//
LOCUS       DATAVD010001706         3679 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_721912, whole genome shotgun sequence.
ACCESSION   DATAVD010001706 DATAVD010000000
VERSION     DATAVD010001706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3679
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_721912"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1509)
                     /locus_tag="VHX39_32700"
     CDS             complement(<1..1509)
                     /locus_tag="VHX39_32700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEX3995955.1"
                     /translation="MKSPGAAASRALVGLVDFCRKRALHVVLAGVVLAVASGLYASRH
                     LGINTDTDQMFDESLPWRQHAMALERAFPQFQGLLVAVINADVPEEADATARDLALAL
                     SGDHTDFSMVRRPDASPYLRKEGLLLLSTAQLTEILNRTIDAQPFLGKLAADPTAVGL
                     FSALSLLGTGVTHDDTDLTPWLPQLRAFHAVIVSALDGHPKPLSWQKLLIGKSGDLGG
                     QYRFVLAQPRQDFHSLRPGGAAEEAIRNAAAKLEFVRSGAAQVRITGQVALADAQFAT
                     VAQGAVAGLIGSMALITLWLTLAVRSWRLILPILGTLLLGLMLTLLFAAGSIGTLNLV
                     SVGFGVLFVGIAVDFAIQFSVRYREARHALGDPAAALRQTAQHAGGAILVAALATAAG
                     FLAFVPTKFSGVAELGLIAGVGMLIAFLCTVTFLPAAITLFRPANEATEVGFVLGGRL
                     DALITRRHGMILLLFGALAVTALLLSPRLQFDSDPLDTQSPNTEAMRTLRDLM"
     gene            complement(1506..2156)
                     /locus_tag="VHX39_32705"
     CDS             complement(1506..2156)
                     /locus_tag="VHX39_32705"
                     /inference="COORDINATES: protein motif:HMM:TIGR03481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3995956.1"
                     /translation="MHDTTTRRRTLLGLAIVAPAAALPWRLACAQIAGAGDQAAPIRR
                     LDDALLAAMKGGQATSFAQRFATLTPVIEQTFDLNDVLALSVGLEWSTLPDDQKPSLY
                     AAFVRYTVASYAANFNNYSGQTFQVSPTVRSLGNGDVIVRTTIVATDGSTRKLDYRMR
                     NGPAGWKAVDVLEDGSISRVAVQRSDFRDLLGSGGVPALMAALRQKVVTLSGGMLA"
     gene            complement(2190..2663)
                     /locus_tag="VHX39_32710"
     CDS             complement(2190..2663)
                     /locus_tag="VHX39_32710"
                     /inference="COORDINATES: protein motif:HMM:NF021438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2147 domain-containing protein"
                     /protein_id="HEX3995957.1"
                     /translation="MPAYEIIEHQKLLYCGIAMAIGIGLLVSQVSATLTPSPVGAWST
                     ANGHGVIEIARCGDAFCGRIVGIERGPGEALPTDVHGQSQCGLTIITNEKPDTDSTWL
                     GEITDPRNGGTYQAKLWLDEAGDLKLRGFIGIPQLGSTQTWHRFTGHLTADCRLL"
     gene            complement(2690..3400)
                     /locus_tag="VHX39_32715"
     CDS             complement(2690..3400)
                     /locus_tag="VHX39_32715"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3995958.1"
                     /translation="MSSERKVAVITGASQGIGAALVEAYRARDYHVVGTARSMWPSGD
                     ADVLAIPGDIADRKTAEHVFSEAIGRFGRVDTLINNAGLFISKPFTEYTDDDYALIMG
                     VNCAGFLYCTQLAIAQMEKQGSGHVVQITTSLVDHASSAVPSVLASLTKGGLAAATRS
                     LAIEYARRGIRVNAVSPGIIRSPMHPSETHAALDALHPVGHMGEISDIVSAILYLETA
                     SFVTGEILHVDGGQSAGH"
BASE COUNT          764 a         1134 c         1103 g          678 t
ORIGIN      
        1 catcagatcg cgcaacgttc gcatcgcctc ggtgttggga ctctgcgtat ccaacggatc
       61 ggaatcgaat tgcaggcggg gagagagcag cagcgcagtc accgcaagcg cgccgaacaa
      121 caacagaatc atgccgtgcc ggcgcgttat aagtgcatcg agcctgccgc ccaggacaaa
      181 gccgacctcc gttgcttcgt tagctggacg aaacagtgtg attgcagccg ggagaaaggt
      241 gactgtgcaa aggaacgcga tcagcattcc aacacccgcg atcagaccga gctctgcgac
      301 gccactgaat ttggttggca cgaaagcgag gaaacccgcc gcagtcgcga gcgcggcgac
      361 caggatcgca ccgccggcat gttgcgcggt ttggcgaagc gcggcagcgg gatcgccgag
      421 agcatgccgt gcctcacggt aacgcaccga gaactggatc gcgaagtcca ccgcaatgcc
      481 gacgaacagg accccgaaac cgaccgaaac gaggttgagc gtaccgatcg atcccgccgc
      541 aaacagcagt gtcagcatca gtccaagcag cagcgttccg aggatcggaa ggatcagccg
      601 ccaacttcgc accgccagtg tcaaccaaag cgtgatcagt gccatgctgc caatcagccc
      661 ggcgactgct ccttgcgcaa ccgtcgcaaa ttgcgcgtct gccagtgcca cctgtccggt
      721 gatccgtacc tgcgccgcac cagagcgcac aaattcaagt ttcgcggcgg cgttgcggat
      781 ggcctcttcc gccgcgccgc cgggccgcag cgagtgaaaa tcctgccgcg gttgtgccaa
      841 aacgaaacgg tattgaccgc cgagatcgcc cgatttgccg atcaacaact tctgccacga
      901 cagcggcttc gggtggccat cgagcgcact cacgatgaca gcgtggaagg cccgcaactg
      961 aggcaaccaa ggcgtgaggt ccgtatcgtc atgcgtgacg ccggtgccca gaagcgacag
     1021 tgccgaaaac agaccaaccg cggtggggtc tgcagcaagc ttgccgagga atggctgcgc
     1081 atcaatggtc cgattcaaga tttcggtcag ttgcgcggtg gaaagcagca gcaaaccttc
     1141 ttttcggaga tacggtgagg catcggggcg acggaccatg ctgaaatccg tgtggtcgcc
     1201 agagagcgcc agcgccaggt cccgcgccgt cgcgtcagct tcttccggca catcggcgtt
     1261 gatgacagcg accagcaaac cttgaaattg tggaaatgcc cgttccagag ccatggcgtg
     1321 ctgacgccag ggcaaactct cgtcgaacat ctgatcggtg tcggtattga tcccaagatg
     1381 acgactggca taaagccccg atgccacggc caggacaacg ccggcgagca ccacatgcaa
     1441 agcacgctta cggcaaaaat ccaccaatcc taccagagcg cgcgacgccg ccgccccggg
     1501 tgacttcatg ccagcatgcc gcctgacaaa gtcactactt tctgccgcaa ggcggccatc
     1561 agtgcgggca cgccgccact gcccaacagg tcacggaagt ccgagcgttg caccgcaacc
     1621 cggctgattg aaccgtcctc gagtacgtcc accgccttcc agcctgcagg accgttgcgc
     1681 atgcggtaat cgagtttcct ggtcgaacca tctgtcgcga cgatcgtggt tcgtacgata
     1741 acgtcaccgt ttccaagact gcgaacagtg ggcgacacct ggaaagtctg tcccgaatag
     1801 ttattgaaat tcgccgcata gctggcaacc gtataacgca cgaatgcggc gtacagcgac
     1861 ggcttttgat cgtccggcag agtggaccac tccaggccaa ccgaaagcgc cagcacatcg
     1921 ttcagatcga aggtttgctc gatcaccggt gtcagcgtgg cgaaccgttg tgcaaacgat
     1981 gtcgcctggc cgcccttcat cgcggcaagc aatgcgtcgt cgaggcgccg tatcggagcg
     2041 gcctgatcac cggcgccggc aatttgggcg caggccagtc gccatggaag ggcggcggcc
     2101 ggtgcgacga tcgcaaggcc gagcagagtg cggcgccgtg ttgttgtatc gtgcatcacc
     2161 gtgactcccg ttcacatggt ttctgacgtt cagagcaggc ggcaatcggc agtcaggtgc
     2221 ccggtaaacc tgtgccaggt ctgcgtggaa cccagttgcg gaattccaat gaagccgcgc
     2281 aatttcaggt cgccggcctc gtcgagccaa agcttcgcct ggtaggttcc tccgttgcgc
     2341 ggatccgtga tctcgcccaa ccaggtgctg tccgtgtcag gcttttcatt cgtgatgatg
     2401 gtcagcccgc actgcgactg gccatgaacg tcggtcggaa gtgcttcccc cggcccacgt
     2461 tcgatgccga caatcctgcc gcaaaatgca tcgccgcatc tggcgatctc aatcacccca
     2521 tggccatttg ccgtcgacca tgcgcctacc ggactgggcg tcagggttgc cgatacctgc
     2581 gacacgagca gaccgatgcc gatggccatt gcgataccac aatataataa cttttggtgc
     2641 tcgatgattt cgtacgctgg catcgttttg tttctggacc ggctcgattt cagtgtccgg
     2701 cactttggcc gccatcgacg tgcaggatct cgccagtgac aaaactcgct gtctcgagat
     2761 agagaatcgc cgaaacgata tcggagattt cgcccatgtg accgaccggg tgcagcgcgt
     2821 cgagtgccgc atgggtctcg ctcgggtgca tcggtgaccg gataatgccg ggcgaaaccg
     2881 cgttcacccg aatcccacgc ctggcatact cgatggccag cgatctggtc gcagcggcga
     2941 ggccaccctt cgtgagcgac gcgagcaccg atggcacggc ggaactcgcg tgatcgacga
     3001 gggacgtggt gatctgcacg acatggccgc tgccctgctt ttccatctgg gctatggcga
     3061 gctgcgtgca ataaaggaac ccggcgcaat ttacgcccat gatgagggcg tagtcgtcgt
     3121 cggtgtactc ggtgaacggc ttgctgatga aaaggcccgc gttgttgatg agcgtgtcaa
     3181 cgcgcccgaa ccgcccgatg gcttcggaga agacgtgctc tgcggtcttg cggtcggcga
     3241 tgtcgccggg gattgcgaga acgtcagcat cgcccgacgg ccacattgag cgcgccgttc
     3301 caaccacgtg ataatcgcgc gcacgatatg cttcgacgag ggcagctccg atcccctgcg
     3361 acgcacccgt aatgactgcg actttccgtt cgctactcat gacagacagt ctcctgcttt
     3421 gcagggccga ccccctgcag ctaccaaact gccatgcagg gggcacgacg tatttcgtaa
     3481 agcatgcgaa tttatggaaa tgcacgttcg aaaaggaatg aacttcatgt ccgatccgcc
     3541 caccccatcg aaccggcacg ccgaggaggt cgctccctcg gaagtgccgg gtttgcatgg
     3601 gctgttgttc gtggcggtcg ccgtcgttgt ggtggcgggg ctctatctcg ggcgttcggt
     3661 gctgatcccg atcacgctg
//
LOCUS       DATAVD010001707         2687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2585922, whole genome shotgun sequence.
ACCESSION   DATAVD010001707 DATAVD010000000
VERSION     DATAVD010001707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2687
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2585922"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..759)
                     /locus_tag="VHX39_32720"
     CDS             complement(<1..759)
                     /locus_tag="VHX39_32720"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3995959.1"
                     /translation="MQTPLEFGWFLPTSGDTTCYGDSASFVPPSATLFDRVILAAEAA
                     GFEYFLVPVATTCWEAWISSAMAVARTHRIKALVAARPGYISPVQLAKMAATFDQLSG
                     GRLAINLIAGQSEAETASEGIVLAKQDRYALMDEDVSIMKALWTARGPVDFAGRFHTL
                     KGARISPHPLQNPYPRFYLGGGSAEAWEVSAKHSDIHLFWGDTPSRIAENMVTIRAMA
                     ARYGRAERIGFGMRLQILCRETEREAWAAAHELVR"
     gene            935..1411
                     /locus_tag="VHX39_32725"
     CDS             935..1411
                     /locus_tag="VHX39_32725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1810 domain-containing protein"
                     /protein_id="HEX3995960.1"
                     /translation="MTDDDYDLERFVKAQSAVAEVALKELRAGRKQTHWMWFIFPQLR
                     GLGHSATARFYGIDSLDEARAYLAHPVLAPRLVLCTQTVLGSAAQSLHDLFGSPDDMK
                     FQSCMTLFEAAAEQTTSVFGQALDGWCAGARDPHTLRLIDAPSDNWAAASVLSRRS"
     gene            complement(1412..1696)
                     /locus_tag="VHX39_32730"
     CDS             complement(1412..1696)
                     /locus_tag="VHX39_32730"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995961.1"
                     /translation="MLFGFSYGGAMPLYAILVREYFPAKIMGSVFGVVAMISTLGMAL
                     GPPVGGWLFDHFGGYGWLFIASSAIGVVGASIALTVRPHQVRPMAVAAAA"
     gene            complement(1706..2626)
                     /locus_tag="VHX39_32735"
     CDS             complement(1706..2626)
                     /locus_tag="VHX39_32735"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995962.1"
                     /translation="MKLFYGWVIVAVGIVVGCVGMGGMMSFGVFLQPMSDSLGWSRGE
                     ISIASTLAFLWMGVGGFLWGSLFDRFGARVVVLLGGLLLGAGLVAASQVQSLLMFLAV
                     YGTAVGLAVGAIYVPLTAATSSWFTRHRSLAVSLVSAGLALGTTVIAPLARWLIVTHD
                     WRFAMLTLGFIAWAVILPAALLLRPAPVAEAGPATISTGGMASVSMTVGQALKTPVFW
                     SLSLANFACCAAHSGPIFHMVSNATDCGVAPLTAATVLGAAGLAALSGRIICGLMADR
                     TGAKRTLVACLFLQAFAIALYLMARDLDTL"
BASE COUNT          564 a          869 c          839 g          415 t
ORIGIN      
        1 gcgaaccagt tcatgtgcgg cagcccatgc ttcacgctct gtctcacggc agaggatttg
       61 cagccgcatg ccaaacccga tgcgctccgc cctgccatac cgcgctgcca tcgcgcggat
      121 ggtgaccata ttctcggcga tgcggctggg cgtgtcgccc cagaacaaat ggatgtcgga
      181 atgttttgcc gaaacctccc acgcctcggc tgagccgccg cccaggtaga agcgcggata
      241 agggttttgc aggggatgcg gcgaaatcct cgcacctttc aacgtgtgaa aacggcccgc
      301 gaaatccacc gggccgcggg cggtccaaag cgccttcatg atcgagacgt cctcatccat
      361 cagggcgtag cggtcctgct tggccaggac gatgccctcg gacgctgtct ccgcctcgct
      421 ttgcccggca atcaggttga tcgcgagacg gccgccggac agttggtcga acgtcgccgc
      481 cattttcgcc agttgcaccg ggctgatata gcccggccga gcggcgacca gcgccttaat
      541 gcgatgcgtc ctggccacgg ccatggcgct gctgatccat gcctcccagc aggtggtggc
      601 aaccgggacg aggaaatact cgaagccagc cgcctcggcc gccagaatga cgcggtcgaa
      661 caacgtggcg gacggtggga cgaagctggc gctgtcgcca taacaggtcg tgtcaccgga
      721 cgtcggaagg aaccatccga actcgagtgg cgtttgcatc aagggcatcc atgattctcg
      781 cgaaagcgta gcggggacgg acgcctctgt caggcagcgc gaacccatcg agccaaggag
      841 ggcttctggc acggggcaga tttcggtgga tctcgatcgg gtcggctcat cggatccgtc
      901 gcgccgaagc cgaccacatc ccgaggctca gtgcatgacc gatgacgatt atgatttgga
      961 acgttttgtc aaagcccaat cagcggtggc cgaggtcgcg ttgaaagaac tgagagcggg
     1021 ccgaaaacaa acgcattgga tgtggtttat ttttccacag cttcgcggcc tcggccactc
     1081 cgccaccgct cggttctacg gcattgattc gctcgatgaa gcgcgcgcgt atcttgcgca
     1141 tccagtgctg gcgccgcgcc tggtgctttg cacccaaacg gtgctcggga gcgcggcgca
     1201 atcgctgcat gacctcttcg gctcgcccga cgatatgaag tttcaatcgt gcatgacgtt
     1261 gttcgaggct gccgcggagc agacgacttc ggtgttcggt caggcactcg atggatggtg
     1321 cgccggcgcg cgcgaccctc acacattgcg cctcatcgac gcgccatcgg acaactgggc
     1381 cgcggcttcg gtgctcagtc ggaggtcctg atcaggcggc tgccgcgact gccattggtc
     1441 gcacctgatg cggccgcacg gtcagcgcga tcgacgctcc gaccaccccg atcgccgagg
     1501 acgcgataaa cagccagcca tatccgccga aatggtcgaa cagccagccg cccaccggcg
     1561 gcccaagcgc catacccaat gtcgagatca tggcgacgac gccgaacacg ctgcccatga
     1621 ttttcgcagg gaaatactcc cgcaccagga tcgcgtacag cggcattgcc ccgccgtagg
     1681 aaaatccgaa cagcatcgac acggcttaga gcgtatcgag atcgcgtgcc atcaggtaaa
     1741 gcgcgatggc aaaggcctgc aaaaacaggc acgccaccaa cgtgcgtttg gcgccggtgc
     1801 ggtcggccat caggccgcaa atgatccggc cagacagcgc cgcgaggccc gctgcgccaa
     1861 gcaccgtggc cgcggtcaga ggcgccacgc cgcagtccgt cgcgttggaa accatgtgga
     1921 agatcggccc ggaatgcgcg gcgcagcatg cgaagttcgc cagcgagagg ctccagaaca
     1981 ccggcgtttt cagtgcttgt cccaccgtca tgctgaccga agccatgcct ccggtggaaa
     2041 tggtggcagg tcccgcctcg gcaaccggcg ccggtcgcag cagcagtgcg gccggaagga
     2101 tcacagccca ggcgatgaaa ccgagggtga gcatggcgaa ccgccagtcg tgggtgacga
     2161 tgagccagcg tgcaagcggc gcaatcaccg tggtcccgag agccagtccc gccgaaacca
     2221 gggagaccgc aaggctacga tggcgggtga accaactgga ggtggcagcg gtcagcggga
     2281 catagatcgc gccgacggcg aggccgacgg cagtgccgta gaccgccagg aacatcagaa
     2341 gactctgtac ctggctcgcg gcgacgaggc ccgcacccag tagcagtcca cccagcagga
     2401 cgaccacgcg ggcgccgaac cgatcgaaca gcgagcccca gagaaaaccg ccgacaccca
     2461 tccagagaaa cgccagggtc gaggcaatgg aaatctcgcc gcgcgaccaa ccaagcgagt
     2521 cggacatagg ctgcaggaag acgccgaacg acatcatgcc gcccatgcca acgcagccaa
     2581 cgacgatgcc gacggcgaca atgacccaac cgtagaatag tttcactcac gacctcccgt
     2641 ccgcatcagc aaggaaactg gcgcggttcc tgagccacac tcatagc
//
LOCUS       DATAVD010001708         3691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1092555, whole genome shotgun sequence.
ACCESSION   DATAVD010001708 DATAVD010000000
VERSION     DATAVD010001708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3691
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1092555"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..382
                     /locus_tag="VHX39_32740"
     CDS             <1..382
                     /locus_tag="VHX39_32740"
                     /inference="COORDINATES: protein motif:HMM:NF014305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3995963.1"
                     /translation="IPPLAGFIEAAVKNHSFAKPPVVIGFSNGAIMAAALLLTHPTLF
                     AGGILLRPLSPFLDDQPVHLNATPVLIIDGEKDSRRSPGDGARLATRFSKAGATVTHH
                     VLPVGHAITQMDVTIARTWLESLR"
     gene            complement(422..1552)
                     /gene="proB"
                     /locus_tag="VHX39_32745"
     CDS             complement(422..1552)
                     /gene="proB"
                     /locus_tag="VHX39_32745"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEX3995964.1"
                     /translation="MIPSLAAARRVVVKIGSALVVDEKAAAPRTAWLAGVAEDIASIR
                     ARGTEVIVVSSGAIALARRTLGLTQRRLKLEEKQAAAAVGQIRLAQAWTEALSARNLT
                     AAQLLLTLDDTEDRRRYLNARATLSTLLALGCVPVINENDTVATAEIRFGDNDRLAAR
                     MAEMVRADVLVLLSDIDGLYTADPRQDPRAEHLPVITALTPEIEAMGGEPPPGYSSGG
                     MRTKLVAARIATQAGVAMAIAKGNVTRPLRALAEGARCTWFLPTADGPSAWKRWISGS
                     LAPRGVFTVDTGAASALRDGRSLLPAGVRSVEGTFQRGDPVLVRGPDGEALARGLSAY
                     ASEDAARIAGHRSSKIETILGWRGRDEIIHRDDLVVLDAGER"
     gene            complement(1549..2559)
                     /gene="obgE"
                     /locus_tag="VHX39_32750"
     CDS             complement(1549..2559)
                     /gene="obgE"
                     /locus_tag="VHX39_32750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008493906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEX3995965.1"
                     /translation="MKFLDQCKIYLRSGDGGDGVVGFRREKYIEFGGPDGGNGGRGGD
                     IVFVAQENLNTLIDFRYAQHFRVKKGGNGAGADRTGAGSPDVVIKVPIGTQIFAEDQE
                     TMLADLDSPGKRLILLRGGDGGLGNAHFKTSTNRAPRKATKGWPGEERWVWLRLKLIA
                     DAGLVGLPNAGKSTFLAATTAARPKIADYPFTTLHPQLGVIRLSMSEEFVLADIPGLI
                     EGAHEGAGLGDRFLGHVERCAVMLHLVDGAAGDVVRAWRTVREELAAYGGGLAEKPEL
                     IGLNKIDAMTPRETSARAAALRKASGRPVMLLSGVTGQGVPEVLRALQNMIHDARQKA
                     AA"
     gene            complement(2626..2898)
                     /gene="rpmA"
                     /locus_tag="VHX39_32755"
     CDS             complement(2626..2898)
                     /gene="rpmA"
                     /locus_tag="VHX39_32755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEX3995966.1"
                     /translation="MAHKKAGGSSRNGRDTEGRRLGVKKSGGQSVIAGNILVRQRGTR
                     WHPGTNVGLGRDHTIFALIDGTVEFRRKSNDKVHISVVPRPALAAE"
     gene            complement(2912..3226)
                     /gene="rplU"
                     /locus_tag="VHX39_32760"
     CDS             complement(2912..3226)
                     /gene="rplU"
                     /locus_tag="VHX39_32760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEX3995967.1"
                     /translation="MFAVIRTGGKQYRVSPDMVLKVEKLEAEAGETVTFNDVLCVGGD
                     AGLTIGGPTVPGASVTATVIAQDRLDKVIIFKKRRRQNSRRRNGHRQHVTVLRVSGIN
                     AA"
     gene            complement(3335..>3691)
                     /locus_tag="VHX39_32765"
     CDS             complement(3335..>3691)
                     /locus_tag="VHX39_32765"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX3995968.1"
                     /translation="LAKLFAEAIDNIDLKQVDGIRSTGASRVAELRYGVLPQILPVLI
                     SQGLYSIESNSREATILGLVGAGGIGLRLSERIQINAWDQVAYVIVLILITVAAIDSL
                     SRWLRLRLIGGPSQRH"
BASE COUNT          675 a         1207 c         1118 g          691 t
ORIGIN      
        1 cattccgcct ttggccgggt ttatcgaagc cgccgtcaaa aatcacagct ttgcgaagcc
       61 tccggtggtc atcgggttct caaacggtgc gatcatggct gcggctttgc tgctgaccca
      121 cccgacctta ttcgccggcg gcatcctgct gcggcccctg tcaccgtttc tcgatgacca
      181 gccagttcac ctgaacgcga cgccggtcct gattatcgac ggagagaagg acagtcggcg
      241 gtcgcccggc gatggcgctc gactggcgac acgtttcagc aaagcgggcg ccactgtgac
      301 ccatcatgtg ctgccggtgg ggcatgcgat cacccagatg gatgtaacga tcgcgcgcac
      361 ctggctggaa agtcttcgat agtgcgtctc ggagaaatgc ggcgccggcg attgaaaaca
      421 gtcatcgttc gccggcgtcg agcacgacca ggtcatcacg atgaatgatc tcgtcccggc
      481 cgcgccagcc caggatggtc tcgattttgc tggagcgatg gcccgcgata cgggcagcat
      541 cctccgacgc ataagcggac aaaccgcgtg ccagagcctc cccatccggg ccccgaacca
      601 acactggatc gccacgctgg aacgtcccct caaccgagcg aaccccggcc ggtaacagtg
      661 agcgcccgtc gcgcaacgcg ctcgctgctc ccgtgtcgac cgtgaacacg ccgcgcggcg
      721 ccaaagatcc ggaaatccag cgtttccatg ctgacggtcc gtctgccgtt ggcaggaacc
      781 atgtgcagcg cgcgccctcg gccaacgccc gtaacggtcg cgtcacgttg ccttttgcga
      841 tcgccatcgc gacgccggcc tgcgtcgcaa tccgggccgc aaccagtttt gtccgcatgc
      901 cgccggagga gtagccgggc ggtggttcgc cgcccatcgc ctcgatctcc ggtgttaggg
      961 cggtgatcac cggcaagtgc tccgcacgcg gatcctgccg cgggtcggca gtgtaaagac
     1021 cgtcaatgtc ggacaacagc accagaacat cggctcgtac catctccgcc atgcgtgccg
     1081 cgagccggtc gttgtcgccg aaccgaattt cggcggtcgc aaccgtgtcg ttctcgttga
     1141 tcaccggaac acagccgaga gcaagcaagg tgctgagcgt ggcgcgggca ttgagatagc
     1201 gccggcgatc ttcggtatcg tccaaggtca acagcagttg cgcggcagtc aggttgcggg
     1261 ccgatagcgc ctcggtccag gcctgcgcca gccggatctg tcccactgca gcggcggcct
     1321 gcttttcctc cagctttaaa cgcctctggg tcaggccgag tgtgcggcgc gccagggcaa
     1381 tggctccgga tgaaacgaca atgacctccg tcccgcgcgc cctgattgac gcgatgtcct
     1441 cggcgacacc ggcaagccag gcggtgcgcg gggcagcagc cttctcgtca acgaccagcg
     1501 cgctaccgat cttgacaacg acacgtcggg cggcggcaag cgatggaatc acgccgccgc
     1561 cttttgccgc gcgtcatgga tcatgttctg cagtgctcgc aacacttctg gcacgccctg
     1621 gccggttacg cccgacagca acatgaccgg gcggccggag gccttccgta atgccgccgc
     1681 tcgcgccgaa gtttccctcg gtgtcattgc gtcgattttg ttgaggccga tcaattccgg
     1741 tttttctgcg agaccgccgc catacgccgc caattcttcc cgcaccgttc gccacgcgcg
     1801 gaccacgtcc cctgcagcgc cgtccaccag atgcagcatg accgcgcagc gctcgacatg
     1861 gccgagaaac cgatcaccca gacccgcgcc ttcatgggcg ccttcaatca ggccggggat
     1921 gtcggcgagt acgaattcct cagacatgga aagccgaatg acaccgagtt gcggatgcaa
     1981 agtggtgaag gggtagtcag cgattttcgg cctcgccgcg gtcgtggcgg caagaaaggt
     2041 ggacttccca gcgtttggca gaccaaccaa tccggcgtcg gcgatcagct tgagccgtaa
     2101 ccacacccac cgttcctcgc ccggccagcc ttttgtggcc ttgcgcggcg cccggttggt
     2161 ggatgtcttg aagtgcgcat tacccaatcc gccatcgccg ccgcgcagca ggatcaatcg
     2221 ctttcccggg ctgtccaggt cggccagcat cgtctcctga tcctcggcga atatctgcgt
     2281 gccgatcggg actttgatca ccacatcggg cgaccccgct ccggtgcgat cagcccccgc
     2341 gccgttgcca ccttttttca cccggaaatg ctgggcgtag cggaagtcga tcaaggtgtt
     2401 cagattttcc tgcgccacga acacgatgtc tccgccacga ccgccgttgc cgccgtcggg
     2461 accaccgaac tcgatgtatt tctcgcgccg gaagccgacc acgccatcgc cgccgtcacc
     2521 ggatcggaga tagattttgc actggtcgag gaacttcatg ctgactcaca aatgaaaatg
     2581 ggggccgcgg cccccatgat cgtagcacgc acgaggccgc gtcggttact cggctgccag
     2641 cgccggtcga ggcacaacag aaatatgcac cttgtcgttt gacttgcggc ggaattccac
     2701 cgtgccatcg atgagggcaa agatcgtatg gtcgcggccc agtccgacat tggtgccggg
     2761 atgccatctg gtgccacgct ggcggaccag gatgttgccg gcaatgacgc tctggccacc
     2821 ggactttttg acgcccaagc ggcggccttc ggtgtcacgt ccgttgcggg atgatccgcc
     2881 tgctttcttg tgtgccattg ggagctgctc cttaggccgc gttgatgccg gagacccgca
     2941 gcacggtcac gtgctggcga tgaccgttgc ggcggcggct gttttgccgg cggcgcttct
     3001 tgaagataat gaccttgtcg agccgatcct gcgcgatgac ggtcgcggtg accgaggcgc
     3061 cgggaacggt cggaccaccg atggtcagac cggcatcgcc gccgacgcac aggacatcgt
     3121 tgaaggtcac ggtctcgccg gcctcggctt ccagcttttc cactttcagc accatgtcgg
     3181 gagagacgcg gtactgtttc ccgccggtgc ggatgacagc gaacatgtga acgactttcc
     3241 aacgcttatt ggccggcggg cgaacccggc gacctgggaa gcgcgggtta tagcgatgag
     3301 gcgcgcagag tcaacgtacg gaagccgcca ttgcttaatg gcgctgcgag ggtccgccga
     3361 tcaatcgcaa cctgagccac cgtgaaagac tatcgattgc cgccacagtg atcagaatca
     3421 gcacaatcac ataggccacc tgatcccagg cgttgatctg gatgcgttcc gaaagccgga
     3481 ggccaatccc tccggcgccg accagaccga ggatggtggc ctcacgcgag ttggattcaa
     3541 tcgaatagag cccttggctg atcagcaccg gcaggatttg cggtagcacg ccataacgca
     3601 gctccgcgac ccgacttgcg ccagtggatc gaatgccatc gacctgtttc agatcgatat
     3661 tatcgatcgc ctccgcgaac agttttgcca g
//
LOCUS       DATAVD010001709         3601 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_722042, whole genome shotgun sequence.
ACCESSION   DATAVD010001709 DATAVD010000000
VERSION     DATAVD010001709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3601
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_722042"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="VHX39_32770"
     CDS             complement(<1..205)
                     /locus_tag="VHX39_32770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995969.1"
                     /translation="MSRDLPSVIRVLVTVTNISTLPRSVPGINPGMMVDGVAIQRFWA
                     LSEPLGNGASDLCGVHPAETHAFK"
     gene            complement(261..1730)
                     /locus_tag="VHX39_32775"
     CDS             complement(261..1730)
                     /locus_tag="VHX39_32775"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3995970.1"
                     /translation="MPHAWDVEADVVVVGFGAAGMAAAVTAHDLGAKVVILEKAPEGQ
                     EGGNTRVAGQGYLNTSSAEQAIAYLTALCGPYTVPERMVQVWAEEMGQNNDWLRSLGG
                     DPQEHQHPPVGIEFPDLPGSGCVHKFHDGPTYGYSYTWQLFERLVKQRPIQVQYETPG
                     RELIQHDATKEILGVRAQRGKRSIAVKARKGVVLTCGGFENNQQMIRDYLPGVPYCYT
                     SGSPYNEGDGITMAMSVGADLWHMNNYAGPSMALKVPEVRTTFSMQALHYSKEIPGGM
                     IVVGPDGRRFTDEKFKTRHGKIPVNGRWLPLSTPCPMFMIFDHTLFASGPLYDKHPSH
                     GWTQIIERYDWSEDNGVELAKGWVKKADGIAGLAAVMGLDPKTLDDTVRRWNSMCEAK
                     CDADFGRRLMLSPVVRGPFYAVELSPSMLNTQGGPRRNEKAQIVRPDGTPIPRLYSAG
                     ELGSIYSYLYQGTGNIGECLAFGRVSGRNAVAEIPWGPE"
     gene            1869..2441
                     /locus_tag="VHX39_32780"
     CDS             1869..2441
                     /locus_tag="VHX39_32780"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX3995971.1"
                     /translation="MTSRVPMVSLERARELGDAMGMPERRTQSEAFRTVANNPGVARV
                     AFSQLMQLLENNKFDTRLRELMIMRIGWVTGSAYEWTQHWRVATTAGIPPEDILAVRD
                     WQNSDRLTAADKAILTATDECLAGKSISDAAWAEVAKHVTDPAHQVEFVIAMGNWMSF
                     SLLFRNLRIPLADGIAVWPPDGLASPAASR"
     gene            2469..3056
                     /locus_tag="VHX39_32785"
     CDS             2469..3056
                     /locus_tag="VHX39_32785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995972.1"
                     /translation="MTDEPNIPLLDHQLADDELAWMHGVYEDFGKLRAASAGRETEFD
                     PKQALRDVLGREKYRIAAQPDLSGPGPWRLGQNQHGRGVAAVFLPKVELHKHAKSRTD
                     QFPMYVVGEADGFSLGNDGEPMLTPVTGGDHFHNSPGAPHAFVPKVGKPIPENWEIAF
                     IAITPRNLREDTQRVSDEVRAAYKRVVGTDAPLGV"
     gene            3079..>3601
                     /locus_tag="VHX39_32790"
     CDS             3079..>3601
                     /locus_tag="VHX39_32790"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3995973.1"
                     /translation="MESQTFDYIVVGAGSAGSVLANRLSANPNYRVLVLEAGRESHPW
                     SRIPVGFAKLIENPAANWLYSSEPDEGTGQRRIPIPRGKLLGGSSSINGMVFVRGQSQ
                     DYDTWAQLGNRGWSFRDVLPIFRDMESYQGDADDEYRGRDGPLKVTESNETGALYDAL
                     IKAAGEVGIKYTKD"
BASE COUNT          732 a         1119 c         1081 g          669 t
ORIGIN      
        1 ccttgaacgc atgggtctcg gcgggatgaa cgccgcacag atccgacgca ccgttgccga
       61 ggggttccga tagcgcccag aacctttgaa tcgcgacgcc atcgaccatc atccccggat
      121 ttattccggg gaccgatcgc ggcaaagtgc tgatgttggt caccgtgaca agcacgcgga
      181 tgacggaagg gagatcgcga ctcacggttc gctgattgtt acatactggc aaccagccga
      241 aagtccgggc tatgcgcgta ttactccggt ccccagggga tttctgccac cgcgttccgt
      301 cctgacacgc ggccaaacgc caggcattcg ccgatattgc cggtgccctg atacaaatag
      361 ctgtaaatcg aacccagttc ccccgcgctg tacaacctgg gaatcggcgt gccgtcgggc
      421 cgcacgatct gcgctttctc attgcgccgc ggtccgcctt gcgtattgag catcgaaggc
      481 gacagctcca ccgcataaaa cgggccgcga acaaccgggg acagcatcag tctccggccg
      541 aaatccgcgt cgcacttcgc ctcacacatg ctgttccacc ggcggaccgt atcgtccaat
      601 gtcttcggat cgaggcccat caccgctgcg agaccggcga tgccatcagc cttcttcacc
      661 caacccttcg ccagttcaac gccgttatcc tcactccagt cgtaacgttc gatgatttgc
      721 gtccacccat gactcggatg cttatcgtaa agcggacccg aggcaaataa cgtgtgatcg
      781 aaaatcatga acatcgggca gggcgtggac aacggcagcc aacgtccgtt caccgggatt
      841 tttccgtgcc ttgtcttgaa cttctcgtcc gtaaagcgcc tgccatccgg accgaccacg
      901 atcataccgc ccgggatttc tttgctgtaa tgcaacgcct gcatcgaaaa cgtggtccgg
      961 acctcgggaa ccttcaatgc catggacggg ccggcataat tgttcatatg ccacagatcg
     1021 gcgccaaccg acatcgccat cgtgatgccg tcgccctcgt tgtacggcga gccggaggtg
     1081 taacagtacg gcacaccagg caggtaatcg cggatcatct gctggttgtt ttcaaagccg
     1141 ccgcaggtca gcacgacccc cttgcgggct ttgacggcga tcgaccgctt gcccctctgc
     1201 gcgcgcacac cgaggatttc cttggtggcg tcgtgctgga tcagttccct gcccggcgtt
     1261 tcgtattgca cctggatcgg gcgctgcttc accagccgct caaacaattg ccaggtgtac
     1321 gaatacccgt aggtcggacc gtcatggaat ttatgcacgc agcccgaacc cggcagatcc
     1381 gggaactcga tgccgaccgg cggatgctga tgctcctgcg gatcgccgcc gaggcttctg
     1441 agccagtcat tgttctggcc catctcctca gcccacactt gcaccatacg ctcgggcacc
     1501 gtgtaaggtc cgcataacgc cgtaaggtag gcgatcgcct gctcggccga ggatgtgttc
     1561 agataccctt ggccggcgac gcgcgtgttg ccgccttcct gaccctcagg cgccttctcg
     1621 aggatgacga ccttggcacc cagatcatgg gcggtgacgg cggcagccat gcctgctgca
     1681 ccaaatccga cgacgacgac atctgcttcg acatcccatg catgtggcat tgaggggtga
     1741 tactccgtga cgtgttcccg tagaccacag gggaccacgg cacggcgccg gcgaccagac
     1801 ccaacggggg attgcagccc agagcgaggc gcgggacgat cggcgaaaca cccagaggga
     1861 gaacgacaat gacgtcccgt gtgccaatgg tatcgctgga acgggcccgc gaactcggcg
     1921 acgcgatggg aatgccggag cgccgcaccc agagcgaggc tttccgaacc gtggccaaca
     1981 atccgggcgt cgccagagtg gcgttcagcc aattgatgca gttgctggag aacaacaagt
     2041 tcgatacgcg cctgcgcgaa ctgatgatca tgcggatcgg ttgggtcacc ggctcggcct
     2101 atgagtggac gcaacattgg cgcgtcgcaa ccactgcggg gatcccaccc gaggacattt
     2161 tggcagtccg ggactggcaa aactccgacc gattgacggc ggcggacaag gcgatcctga
     2221 ccgccaccga cgaatgtctc gccggcaaat cgatctccga tgccgcctgg gccgaggtgg
     2281 caaagcatgt caccgaccct gcgcaccagg tggaattcgt tattgccatg ggcaactgga
     2341 tgtcgttctc gttgttgttc cgcaatctgc gcattccgtt ggccgacggc atcgcggtct
     2401 ggccgcccga cggtctggcg tcgccggcag cctcgcgata gagaccaaga ccatgaagga
     2461 gatatcgtat gactgatgaa ccaaacattc cgttgctgga tcaccaactg gccgacgacg
     2521 aacttgcgtg gatgcacggc gtctacgaag acttcggcaa gctccgcgcg gcgtccgccg
     2581 gccgggaaac cgagttcgac ccaaagcagg cgttgcgcga cgtcctcgga cgtgaaaaat
     2641 atcggattgc cgcccaaccg gacctgtcgg gaccggggcc gtggcgcctg ggtcaaaatc
     2701 agcacggccg aggggttgcc gcggtgttcc tgccgaaggt ggaactgcac aaacacgcaa
     2761 aaagccgcac cgaccagttt ccgatgtatg tggtcggcga agcggacggg ttttcccttg
     2821 gtaacgacgg cgaaccgatg ctgaccccgg tgacgggcgg cgatcatttc cataattcgc
     2881 ctggcgcgcc gcatgccttc gtgccgaaag tcggtaagcc gatcccggag aactgggaaa
     2941 tcgctttcat cgcgattacg cctcgcaatc tcagggaaga tacgcaacga gtctccgacg
     3001 aggtcagagc cgcttataag cgcgtggtcg gcaccgacgc accgctcggc gtgtaagctg
     3061 ggtggcctgg ggggaagtat ggaaagccag acttttgact atatcgtggt gggcgcagga
     3121 tcggccgggt cggtcctcgc caaccggctc agcgccaatc ccaattaccg ggtgctggtg
     3181 ctggaagccg ggcgagaaag ccatccctgg tcgcgcatcc cggtcggctt tgcgaagttg
     3241 attgaaaacc ctgccgccaa ctggctgtat tcgtcagagc cggacgaagg caccggccaa
     3301 cgccgcattc ccattccgcg cgggaaactg ttgggcggct cgtcctcgat caacggcatg
     3361 gtgttcgtgc gcggccaatc gcaggactat gacacctggg cgcagctcgg caatcgcggc
     3421 tggagctttc gagatgtgct gccgattttt cgagatatgg aaagctatca gggtgacgcg
     3481 gacgatgagt accgcggccg cgacgggccg ctgaaagtca ccgaaagcaa cgagaccggc
     3541 gcgctgtatg acgcgctgat caaagccgcc ggcgaggtcg gtatcaaata caccaaggac
     3601 t
//
LOCUS       DATAVD010001710         3927 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_166987, whole genome shotgun sequence.
ACCESSION   DATAVD010001710 DATAVD010000000
VERSION     DATAVD010001710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3927
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166987"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /locus_tag="VHX39_32795"
     CDS             <1..511
                     /locus_tag="VHX39_32795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEX3995974.1"
                     /translation="DVLLSAPSILIGLFIYQLAVQPFGGFSGIAGCLALAVLVIPIVV
                     RTTEDMLRLISPSLREAAIGLGAPKWKVIVLICYRAAKDGIMTGILLAIARIAGETAP
                     LLFTSLGNLNWSVSLRQPMASLPVTIYQYAGSAFDDWVQLAWVGALLITVGVLALNIA
                     ARFALRGRS"
     gene            516..1349
                     /gene="pstB"
                     /locus_tag="VHX39_32800"
     CDS             516..1349
                     /gene="pstB"
                     /locus_tag="VHX39_32800"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HEX3995975.1"
                     /translation="MSTAMSSQQEHPNSHGGVQVRSATAINEPKISIENVDFFYGDHR
                     ALKSINLDLPDRQVTGMIGPSGCGKSTLLRVLNRMFDLYPGQRATGNVMMDGQNIIAP
                     DTDLNSLRARVGMVFQKPTPFPMTIYDNIAFGVKLHEKLSKSQMDERVEWSLTRGALW
                     TEVKDRLQTSAMGLSGGQQQRLCIARTIAVRPEVILLDEPTSALDPISTLKIEELIDE
                     LKHDFTIAIVTHNMQQAARCADQVAFFYIGEMVECAPAAQLFTAPKEKRTQDYVTGRF
                     G"
     gene            1379..2098
                     /gene="phoU"
                     /locus_tag="VHX39_32805"
     CDS             1379..2098
                     /gene="phoU"
                     /locus_tag="VHX39_32805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HEX3995976.1"
                     /translation="MPEQSEHLVKSFDQDLKRLTDMLIRMGGIVENQVALASEAVMER
                     NAEAATRTVEEDVKVDALEREVDAFVIRMLALRQPMAGDLRHIVAGLKVTGDLERIGD
                     YAANVAKRSIVLAQFPAPYSLGGLAHMLGLVQGQLKSIIDALGSNDSDKAIEVWRSDR
                     AVDDIYNTIFRELITYMMEDPRNITPCTHLLFIAKNLERIGDHTTNIAETIYYSVKGE
                     VIPDVRPKGDTSAYAVVRPKE"
     gene            2113..2829
                     /gene="phoB"
                     /locus_tag="VHX39_32810"
     CDS             2113..2829
                     /gene="phoB"
                     /locus_tag="VHX39_32810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulator
                     PhoB"
                     /protein_id="HEX3995977.1"
                     /translation="MPDGLSTLPRPLVLVVEDEAAIATMLRYNLEKQGYRVSEASDGQ
                     EALTRIQEQQPDIVLLDWMLPLMSGIEVCRQIRRKPATRDLPVIMVTARTEDQEAVRG
                     LNPGADDYITKPFNIDSLLARVRALLRRSNAVPEKGQLAFHDIEMDLSSHRVSRNGRR
                     VHLGPTEFRLLEFFMQHPRRVFSREELLDAVWGHDIHVEPRTVDVHIRRLRKSMNIEG
                     ELDVVRTVRAAGYALDTEPV"
     gene            complement(2839..>3927)
                     /locus_tag="VHX39_32815"
     CDS             complement(2839..>3927)
                     /locus_tag="VHX39_32815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019090204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEX3995978.1"
                     /translation="NPPDYNGFKMVLGGKPFFGTQIQEIGRMAREGDVVAESSAASRT
                     IDMEEDYTRRLLRDWDGRDRKLKVVWDNGNGAAGDVLAALVRHLPGEHTVLNGTIDGT
                     FPAHHPDPTIPKNLEQLIAEVRAQQADIGIAFDGDADRIGLVDDTGTIMFGDQLMVLL
                     ARDVLRSDPGAMIIADVKASQVLFDEIAAAGGVPLMWKTGHSLIKSKMAETGCPLAGE
                     MSGHIFFADKWYGFDDALYAAVRTLGVLARSGRRLSEIREALPQVVNTPEVRFDCDDV
                     RKFQVIEEVAARLRTEGASVTETDGVRVLSSDGWWLLRASNTQAVLVARAEAKTTAGL
                     AALQAALVRQLAASGVAAPDFSGEHSGH"
BASE COUNT          807 a         1199 c         1165 g          756 t
ORIGIN      
        1 cgacgtgctg ctgtcggcgc catccatcct gatcggcctg ttcatctacc agctcgcggt
       61 gcagccgttc ggcgggtttt ccgggatcgc cggctgcctt gcactggcgg tgctggtgat
      121 cccgatcgtc gtgcgcacga cagaggacat gctgcggctg atctcgccct cgctgcggga
      181 ggcggcgatc gggcttggcg cgccgaaatg gaaagtcatc gtgctgatct gctatcgcgc
      241 ggcgaaggac ggcatcatga ccggcatcct gctcgccatc gcccgcatcg ccggtgagac
      301 tgccccactg ctgttcacca gtctgggcaa cctcaactgg tcggtcagtc tgcgccagcc
      361 gatggccagc ctgccggtga cgatctatca atatgccggg tcagcgttcg atgactgggt
      421 gcagcttgcc tgggttggcg cgttgctgat tacggtcggg gtattggccc tcaacatcgc
      481 cgcgcgcttt gcgctgcgtg gcaggagctg aacgaatgag cacggcaatg agcagtcaac
      541 aggaacatcc gaacagccac ggcggcgtgc aggtgcgttc cgcaaccgcg atcaacgagc
      601 caaaaatttc catcgaaaac gtggattttt tctacggcga ccatcgcgca ttgaagagca
      661 tcaatctgga cctgccggac cgtcaggtga ccggcatgat cggcccatcg ggctgcggca
      721 agtcaaccct gctgcgggtg ctgaaccgga tgtttgacct gtaccccggc cagcgcgcca
      781 ccggtaacgt gatgatggac ggccagaata tcatagcgcc ggacaccgac ctgaattcgt
      841 tgcgcgctcg cgtcggcatg gtgttccaga aaccgacgcc gttcccgatg accatttacg
      901 acaacattgc cttcggggtg aaactgcacg aaaaactgtc gaagtcgcaa atggatgagc
      961 gggtagagtg gtcgttgacc cgcggcgcgc tgtggaccga ggtcaaggac cggctgcaaa
     1021 cctcggcgat gggattgtcg ggcggccagc aacaacggtt gtgcatcgcg cgcaccattg
     1081 cggtgcggcc cgaagtgatc ctgctcgatg agccgaccag cgcgctcgat ccgatcagca
     1141 ccctgaagat cgaggagcta atcgacgaac tgaagcacga tttcaccatt gccatcgtca
     1201 cccacaatat gcagcaggcg gcgcggtgcg cggaccaggt cgcattcttc tatatcggcg
     1261 aaatggtgga atgtgccccc gcggcgcaat tgtttaccgc gccaaaggag aagcggacac
     1321 aagactatgt gaccggccgg ttcggctgac ctttctggtt cgaaaaggaa acgtgaccat
     1381 gccggaacag tccgagcacc tcgtcaaaag cttcgatcag gacctgaagc ggctgaccga
     1441 catgctgatc cgcatgggcg ggatcgtcga aaatcaggtc gccctcgcct ctgaagcggt
     1501 catggaacgc aatgccgagg cggcgacgcg cacggtcgaa gaagacgtga aggtcgacgc
     1561 gctcgagcgc gaggtcgatg cgttcgtcat ccgcatgctg gcgctgcgcc agccgatggc
     1621 aggcgacttg cgtcatatcg ttgccggact gaaagtgact ggcgatctgg aacggatcgg
     1681 cgattacgcg gccaacgtcg ccaagcgcag catcgttctg gcgcaattcc cggcgcccta
     1741 ttcgctcggc ggtcttgctc acatgttagg ccttgtgcaa ggccaactca aatccatcat
     1801 cgacgccctg ggctccaacg acagcgacaa ggcgatcgag gtctggcgtt ccgatcgcgc
     1861 tgttgatgat atctataata caatatttcg cgaattgatc acctatatga tggaagatcc
     1921 gcgaaatata acaccgtgca cccacctgtt gttcattgcc aagaatctgg aacgaattgg
     1981 cgatcatacg accaatattg ccgagacgat ttactactcg gtgaagggtg aggtgatccc
     2041 ggatgtgcgg ccgaaggggg atacgtcggc ctacgccgtg gtgcggccaa aagaatgaag
     2101 ggataacaga gcatgcctga cggtctctcg accttgccaa gaccgttggt tctggtggtg
     2161 gaagatgaag cggcgatcgc aacaatgttg cggtataacc tggaaaaaca gggctatcgc
     2221 gtatccgagg cctctgacgg ccaggaagcg ctgacccgga tccaggagca gcagcccgac
     2281 atcgtgttgc tggactggat gctgccgttg atgtcgggca tcgaagtttg ccggcaaatt
     2341 cgccggaaac cggcgacccg cgatctgccg gtcatcatgg tgaccgcccg caccgaggat
     2401 caggaagcgg tgcgcggcct caatcccggc gccgatgatt acatcaccaa accgttcaat
     2461 atcgattcgt tgctggcgcg cgtgcgtgcc ttgttgcggc gctcgaatgc cgtcccggaa
     2521 aagggccaac tggcatttca cgacatcgaa atggacctgt cgtcgcaccg ggtcagccgc
     2581 aacggccgca gggtccatct gggtcccacc gagttccggc tgttggaatt ctttatgcag
     2641 catccgcgcc gggtgttctc ccgcgaggag ttactcgacg cggtctgggg tcacgatatt
     2701 catgtcgagc ccaggacggt ggatgtgcat ataaggcgct tgcggaagtc gatgaatatc
     2761 gaaggcgagc tggacgtcgt gcgcaccgta cgtgccgccg gttacgcgct ggacactgag
     2821 ccagtctgac acgcggggtc agtgcccgga gtgctcaccc gagaaatccg gcgctgccac
     2881 gcctgacgca gccagttgcc gaaccagtgc ggcctgcaac gcagcaaggc ccgccgtcgt
     2941 tttcgcctcg gcgcgtgcca ccagcaccgc ctgggtgttg gacgctcgca acaaccacca
     3001 accgtcagag ctcaggacgc gcacgccgtc ggtttccgtc acgctggcgc cttcggtgcg
     3061 cagacgggcg gcaacttcct caatcacctg aaactttcga acatcatcgc aatcaaagcg
     3121 aacttccggg gtgttgacga cctgcggcaa cgcctcgcga atttcggaca accgccgacc
     3181 cgaccgcgcg agcaccccca aagtccggac cgctgcatac aacgcatcgt caaaaccgta
     3241 ccatttatcc gcgaagaaaa tgtggcctga catctcgccg gcaagcggac agcccgtctc
     3301 tgccattttc gatttgatca gagaatgacc agttttccac atcaacggca caccgccggc
     3361 cgctgcgatt tcatcaaaca gcacctgact ggccttcacg tcggcgatga tcatcgcacc
     3421 cgggtccgaa cgtaatacgt cgcgcgccaa caacaccatc agctgatcgc cgaacatgat
     3481 cgttccggta tcgtcgacca gaccgatccg gtccgcgtca ccgtcaaacg caatgccgat
     3541 atcggcctgc tgcgcgcgca cctcggcgat cagttgctcg aggtttttcg gaatcgtggg
     3601 atccggatgg tgcgccggaa acgtaccgtc gatcgttccg ttgagcacgg tatgctcacc
     3661 cggcaaatgc cggaccagcg ccgccaggac atcgccggcc gcgccgttgc cattgtccca
     3721 caccaccttc agcttacgat cgcggccgtc ccagtcgcgc aacaatcgcc ttgtataatc
     3781 ttcttccatg tcgattgtgc gtgatgcggc cgagctttcg gcaaccacat cgccctcgcg
     3841 cgccatgcgg ccgatttcct ggatttgtgt gccgaaaaac ggcttgccgc ccagtaccat
     3901 cttaaagccg ttataatctg gcggatt
//
LOCUS       DATAVD010001711         2254 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3323038, whole genome shotgun sequence.
ACCESSION   DATAVD010001711 DATAVD010000000
VERSION     DATAVD010001711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2254
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3323038"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1182
                     /locus_tag="VHX39_32820"
     CDS             <1..1182
                     /locus_tag="VHX39_32820"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3995979.1"
                     /translation="KEHHPRFHIGESLLPANMPLFDALGVGDEIARIGIAKYGVEFVS
                     PYHAGGPSHLDFAQSWDGNFESAYEVRRSEFDHVLFRNAAAAGALTMEGCRVTAVEFP
                     APGRVVASARGDDGQDHRFTAKYLVDASGRDTLLANKVARKTSNRHHHSAAVYGHFTG
                     ARRQPGKAEGNISLFWFDHGWFWFIPLRDGTTSIGAVCHADFIKARNTDVTTFFKNVI
                     AMSPALSERLRDAEMTGPATATGNYSYASDRIWGPGYLMVGDAYGFIDPVFSSGVYLA
                     MQGAFFAADAVSACLHKPQAEAERVLRRYEADVKRAMHRFSWFIYRINRPTTRALFMQ
                     SGNPLRMREAVLSLLSGDVFRPSPIHMRLRLFKCMYYLKAMATRLTGPAVRPVAHTSK
                     I"
     gene            1235..2038
                     /locus_tag="VHX39_32825"
     CDS             1235..2038
                     /locus_tag="VHX39_32825"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3995980.1"
                     /translation="MRGETNPDHVVLIPSYNTGSRLFETIAAVRRSGLPVIVVIDGSS
                     DGTSEGLIRLTADDPALIACVLPNNQGKGAAILHGLRLARTHRFTHALTMDADGQHST
                     AHIGTLIALSLAHPDCMILGQPLFDASAPRIRIFGHKIANFCTGLLTPRGAIGDSLFG
                     FRVYPIDPLIETFASTAGMRRFDFDSEAVIRLNWQGVRPINILTPVRYFRRDEGGVSH
                     FKYLRDNLLLTAMYCRLAAALLVHKPSQLARRPRTVGTAQYHSVRSLRR"
     gene            complement(2019..>2254)
                     /locus_tag="VHX39_32830"
     CDS             complement(2019..>2254)
                     /locus_tag="VHX39_32830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010665967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3995981.1"
                     /translation="SLALELASRGITVNTVAPGIIASAMADKAFDAEQIARLVPMKRA
                     GTPEEVAELVRFLTSEEAGYISAQLISINGAMI"
BASE COUNT          422 a          655 c          688 g          489 t
ORIGIN      
        1 aaggaacatc atccacgatt tcacatcggc gagtcattgc tgcctgcaaa catgccgttg
       61 ttcgacgcac ttggcgtggg cgacgagatc gcccggatcg gaatcgccaa atatggggtg
      121 gagttcgtct ctccatacca cgccggtgga ccatcgcacc tcgatttcgc gcagagctgg
      181 gacggcaatt tcgagtcggc gtacgaggtg cgacggtcgg agtttgacca cgttctgttc
      241 aggaatgccg ctgcggccgg tgcgctgaca atggagggtt gtcgcgtcac cgcggttgag
      301 tttccggcac cgggtcgcgt tgtcgcgtcg gcacgcgggg acgatgggca agaccaccgg
      361 ttcaccgcga aatatctggt cgatgcctcg ggacgcgaca cgttgctagc caacaaggtc
      421 gccaggaaga ccagcaaccg gcaccatcac agtgccgccg tgtacggtca tttcaccggc
      481 gcccgccggc agcctggcaa ggccgagggc aacatcagct tgttttggtt cgatcatggc
      541 tggttctggt tcattccgtt gcgggatgga acgaccagta tcggcgcggt gtgccatgcc
      601 gacttcatca aagcgcgcaa caccgatgtg accacgttct ttaagaacgt gatcgccatg
      661 tcgccggcat tatcggaacg gctgcgtgac gcggagatga ccggaccggc gaccgcgacc
      721 ggcaattact catatgcgtc cgatcgtatt tggggacctg gatatcttat ggtcggcgat
      781 gcgtacggct tcatcgatcc ggtgttctct tccggggttt atctcgcgat gcaaggggcg
      841 ttttttgccg ccgatgcagt ctccgcctgt ttgcataagc cgcaggcgga ggccgaacgc
      901 gtgctgcgcc gttacgaggc cgacgtgaag cgcgcgatgc atcggttttc ctggttcatt
      961 taccggatca accggcccac cacccgggcg ctgttcatgc agtcgggcaa tccgttacgc
     1021 atgcgtgagg cggtgctgtc gttgctttcg ggcgatgtgt tccgtccgtc gccaatccat
     1081 atgcgtttgc gcttgttcaa atgtatgtat tacctcaagg ctatggcaac caggctgacc
     1141 ggcccggcgg tcagaccggt cgcccacacc agcaagatat agccctcatg gataatccca
     1201 tacgaaaccc ggcagcggcg atctgacggt tggcatgaga ggcgagacaa acccggatca
     1261 cgttgtgctg atcccgagct acaacaccgg ttcccggttg ttcgaaacga ttgccgcggt
     1321 gcgccggtcg gggttgccgg tgatagtggt catcgacggt agctcggatg gaaccagcga
     1381 aggtctgatt cgcctgactg ccgacgatcc ggcgctgatt gcttgcgtat tgccgaataa
     1441 tcagggcaaa ggcgcggcca tcctacatgg attgcgtctg gccaggacgc atcggttcac
     1501 gcatgcattg accatggatg cggacggtca gcactcgacg gcacatatcg ggacgctgat
     1561 cgctttgtcg ctcgcccatc cggattgtat gatattgggg caaccattgt tcgatgccag
     1621 tgcaccgcgg attcgaatct tcggtcataa gatcgcgaat ttctgcaccg gtctgctgac
     1681 cccacgcggt gcgatcggcg attcgctgtt tggatttcgg gtttatccga tcgacccgct
     1741 gatcgagacc tttgccagta ccgccgggat gcggcgcttc gatttcgact ccgaagccgt
     1801 gatacgcctg aactggcaag gcgtgcgtcc gatcaatatc ctcacgccgg tgcgctattt
     1861 ccgtcgcgat gagggcggcg tctcgcattt taaatactta cgcgacaact tgttgctgac
     1921 ggcgatgtat tgccggctgg cggcggccct gctggtccac aaaccttcac agctagcacg
     1981 gcgtccgcga acggttggga cggcgcagta tcactcggtc agatcattgc gccgttgatc
     2041 gaaataagct gcgcggaaat ataaccggcc tcctccgagg tcagaaaccg caccagttcg
     2101 gcaacctctt ccggcgtgcc cgcgcgcttc attgggacca gccgggcgat ttgctcggcg
     2161 tcaaacgcct tgtctgccat ggcggaagcg atgatgccgg gtgcaacagt attgaccgta
     2221 atgccccggc tggcgagttc caatgccagc gagc
//
LOCUS       DATAVD010001712         3275 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2769302, whole genome shotgun sequence.
ACCESSION   DATAVD010001712 DATAVD010000000
VERSION     DATAVD010001712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3275
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2769302"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(257..1129)
                     /gene="yghU"
                     /locus_tag="VHX39_32835"
     CDS             complement(257..1129)
                     /gene="yghU"
                     /locus_tag="VHX39_32835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent disulfide-bond
                     oxidoreductase"
                     /protein_id="HEX3995982.1"
                     /translation="MSSTTEYVPPKVWTTKPALGRFANINRPTAGAQFERELPIGKHP
                     LQLYSLGTPNGVKVTVMLEELLALGHKGAEYDAWLIKIGEGDQFGSGFVSINPNSKIP
                     AMVDRSGQKPIRVFETGAILVYLAEKFGALLPTEAAARAECMSWLFWQMGSTPYVGGG
                     FGHFYAYAPVKIEYAIDRFTMETKRLLDVLDKRLAESEYLAGDAYTIADIAAWPWYGG
                     LVKFNSYGGSEFISAHEYKNVIRWADQIYARAAVRRGRMVNRLQGEPSEQLQERHDAS
                     DFETKTQDKLAAKG"
     gene            1265..2092
                     /locus_tag="VHX39_32840"
     CDS             1265..2092
                     /locus_tag="VHX39_32840"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3995983.1"
                     /translation="MRVIDVQVHAYEHNHPGRPWAGVLHGPQSANGEEMTAAMDAVGV
                     DAAIIVSTFNLYRYDPSYAMEVYSRWPDRFRVVKPIDVTDPAIDEVVAEWAATKGAVG
                     VRIMLRDELPSDPADPRVNRAFAAAGRHGLPVNFLCWGRLEHGTELVRRNPDTVIVID
                     HLGLLQPAEPPPPAEPWADLPRLLALAAFPNVRVKISGACTLSREGYPYGDIWEPVLR
                     IIDAFGLDRCMWGTDWTRTSGMLTYEQGVRPFVGTTRLSEGDKAKLMGGTLEKVYRW"
     gene            complement(2102..2524)
                     /locus_tag="VHX39_32845"
     CDS             complement(2102..2524)
                     /locus_tag="VHX39_32845"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX3995984.1"
                     /translation="MARMTEYDPTSDGWAPMHANPMPAGLGVPWQRRQADAWRYGLLT
                     RTDHANPAGAVHGGVLAVFADHTLGCYVEAASDGAPNVTIQLNTHFLAAVPPGSFLEL
                     RGEVTRVTGTMVFVRGIIAVGKRDVLAADGIWRVFRRR"
     gene            2829..>3275
                     /locus_tag="VHX39_32850"
     CDS             2829..>3275
                     /locus_tag="VHX39_32850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="UGSC family (seleno)protein"
                     /protein_id="HEX3995985.1"
                     /translation="MPFDSRRIHDVPDDLLAAIDYCFEQGWTDGLPVIPPVVDRVDAT
                     LAFEGRPPEAVIATHPATGLQLTVHAAAVNAVMAGCLPEYFPVLVAAFEAMDKPDFNF
                     HGSTASTGGSAPLLIVSGPVADDIGMNADVNLFGPGNRANATIGRAV"
BASE COUNT          576 a          990 c         1085 g          624 t
ORIGIN      
        1 ccgggtataa gtatccacag tcagtggacc gtgactcgcg ataccgcttt cgtcatcccc
       61 gcccccgtcg cggggatcaa cctcagcacc ttgccgtgat tgtccccgga acaagtccgg
      121 ggatgacgat tgggtgcatc acgatctatc gattccgcct actagccgaa cgcggttcac
      181 gatgtccaca ggatttgagc aagggaccgc tcgcaccaac cacccccgaa ggatgcggcg
      241 gatgcgagcg gggtgcctac cccttggccg ccagtttgtc ctgcgtcttc gtttcgaagt
      301 cgctggcatc gtgccgctct tgcagctgct ccgacggttc accctggagc cgattgacca
      361 tccggccccg ccgcaccgct gcccgggcat aaatctggtc ggcccaacgg atgacgttct
      421 tgtattcgtg cgcggaaatg aattcggacc cgccatacga attgaacttc accaggccgc
      481 cataccaggg ccacgctgca atgtcggcga tcgtataggc atcgccggca aggtactcgc
      541 tctcggcaag ccgtttgtcg agcacgtcca gcaggcgctt cgtttccatt gtgaacctgt
      601 cgatggcata ctcgatcttg accggcgcgt aggcataaaa gtgcccgaac ccgccgccga
      661 catacggtgt gctgcccatc tgccagaaca gccaggacat gcactcggca cgggccgcgg
      721 cctcggtcgg cagcaaggcg ccaaacttct cggccaggta caccaggatc gcaccggtct
      781 cgaacacacg gatcggcttc tgtccactgc gatccaccat ggccgggatc ttggagttgg
      841 gattgatcga cacgaagccg ctaccgaact gatcgccttc gccaattttg atcaaccagg
      901 cgtcgtactc ggcgcccttg tgcccgagag ccagcaactc ctccagcatc acggtcactt
      961 tcacgccgtt tggggtgccc agggaataga gttggagagg atgcttgccg atcggcagtt
     1021 ctctctcgaa ctgcgcgccg gcggtcgggc ggttgatatt tgcgaaccgg ccaagagcag
     1081 gcttggtggt ccagactttt ggggggacgt actcggttgt gctgctcatg atgggggctc
     1141 ccttggtttg cggcgcaacc tggccgggcg gctcggatcg cgcaagcggg cacgctggct
     1201 ggcggggatc tcgcggtcgg gatgggtgtc tgagttgact gttccgactg tgagggaggc
     1261 accgatgcgc gtgatcgacg tccaggtcca tgcctatgag cacaatcatc ctggccggcc
     1321 ctgggctggc gttttgcatg gtccacaatc cgccaacggc gaggaaatga cagcggccat
     1381 ggacgcagtc ggcgtcgatg ccgcgatcat cgtgtcgacc ttcaatctgt atcgttacga
     1441 tcccagctac gctatggaag tatattcgcg ctggccggat cggtttcgcg tggtcaagcc
     1501 gatcgatgtc accgatccgg cgatcgatga ggtcgttgcc gagtgggctg cgaccaaggg
     1561 tgcggtgggc gtgcggatca tgctgcggga tgaactgccg agcgatccgg cagatcctcg
     1621 ggtgaaccgc gcgtttgctg cggcgggccg gcatgggctg ccggtgaact ttttgtgctg
     1681 gggccggctg gagcacggga cggaactggt tcggcgcaat ccggatacgg tgatcgtgat
     1741 cgaccatctc ggactgttgc agcccgccga accgccgccg cccgccgagc cttgggccga
     1801 tctgccgagg ctgctggcac tggcggcgtt tcccaatgtg cgggtgaaga tcagcggggc
     1861 ttgtacgctg tcgcgggagg gatacccgta cggcgacatc tgggagccgg tgctgcggat
     1921 catcgacgcg ttcggcctgg atcggtgcat gtggggaacg gattggacgc ggacaagcgg
     1981 gatgttgact tatgaacaag gggtgcggcc gttcgtgggg acgacgcggt tgtcggaggg
     2041 ggataaggcg aagttgatgg gtgggacgct ggaaaaggtt tatcggtggt aaaccccgat
     2101 ctcagcgtct gcgaaacacc cgccaaatcc cgtccgccgc caaaacgtct cgcttcccaa
     2161 ctgcgatgat accgcggacg aacaccatcg tgccggtgac gcgggtcacc tcaccgcgca
     2221 gttccagaaa ggatccggga gggaccgcgg ccaggaagtg agtgtttaac tgaatcgtga
     2281 cgttgggtgc gccgtcggaa gctgcctcga cgtaacagcc cagagtgtga tcggcgaaga
     2341 ccgcaaggac gccgccgtgg accgccccgg cgggattggc gtgatccgtc cgggtcaaca
     2401 ggccgtagcg ccacgcgtct gcctgacgcc tctgccaggg cacgccgagg ccggccggca
     2461 tcgggttggc gtgcatcggt gcccacccgt cggaggtcgg gtcgtactcg gtcatgcggg
     2521 ccatggctga ccgccggccc gcgtcgtcgg tactgttcga tgtgtcatga gcgcaaaatg
     2581 cgggttgcgg cgcagtgtcg caaccgcacg tgacaaagtg cagtcattgc gcaccagtgc
     2641 tgcgcatcgt cgaagcgttc gggcggatgt ggggtgccaa tcagaagttg gtgcggggag
     2701 gggcttcgcg cagatagaaa acggggaggc ccggttgatg ggacggacgt tggaaatggt
     2761 ctataagcgg aagcagcctg aggaagatac gatctgagcc cttcccaccc gatcggagcg
     2821 tccagtccat gccgttcgat tcccgccgca tccacgacgt gccggacgac ctgctcgccg
     2881 ccatcgacta ttgcttcgag caaggctgga ccgacggact tcccgtcatc cctccggtgg
     2941 ttgaccgggt tgacgccacg ctcgctttcg agggccgccc gcccgaggcg gtgatcgcca
     3001 cccatcccgc caccggcctg caactgactg tgcatgccgc cgcggtgaac gccgtgatgg
     3061 ccggctgtct gccggagtat ttccccgtcc tggtcgccgc gttcgaggcg atggacaaac
     3121 cggacttcaa tttccacggc tcgactgcca gcaccggcgg ctcggcaccg ttgttgatcg
     3181 tcagcggtcc ggtggcggac gacatcggca tgaacgccga tgtgaacctg ttcggcccag
     3241 gaaaccgggc gaatgcgacg attgggcgag cggtt
//
LOCUS       DATAVD010001713         3551 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_535021, whole genome shotgun sequence.
ACCESSION   DATAVD010001713 DATAVD010000000
VERSION     DATAVD010001713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3551
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_535021"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..995)
                     /locus_tag="VHX39_32855"
     CDS             complement(<1..995)
                     /locus_tag="VHX39_32855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019091918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3995986.1"
                     /translation="MSQTASMDFASIPGTQLNPSRIALGTWAIGGWMWGGTDDAQAIA
                     TIQSAVDRGITLIDTAPAYGFGHAEELVGQALAEVGARNKVCIATKVGLDWNDGNVFR
                     NASRARIRKEVEDSLRRLRTDVIDLYQVHWPDPKLPIEETAEAMLDLWRAGKIRAIGV
                     SNFSVAQMRTFRAIAPVHTAQPPYNLFERGADADIVPYCRDSGIATLAYGPLCRGLLA
                     GRITRETTFTGDDLRRFDPKFQAPRLNQYIAAVEQLDRFARDNYGKRVIHLAVRWVLD
                     REGLTFALWGARRPNQLDAVSEIAGWKLDASAMQEIDRIVASCVADPVGPEFMAPP"
     gene            complement(1137..2126)
                     /locus_tag="VHX39_32860"
     CDS             complement(1137..2126)
                     /locus_tag="VHX39_32860"
                     /inference="COORDINATES: protein motif:HMM:NF023165.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3300 domain-containing protein"
                     /protein_id="HEX3995987.1"
                     /translation="MNRSKQSITWLVSASLVLATAQTGCAVAQSTPAPSLLTVDESAQ
                     QLDQLVAPIALYPDSLVAQILAASTWPSEVVGADRWMRQHSGLNGTGFAQAVDQQAWD
                     SSVKALTQFPLVLANMDTNLVWSTALGNAYASDPQNVLHAIQVMRWRAQQAGNLMHVP
                     HEIVTYEGDTIVIQPADAETVYLPEYDPWVVYGTPLAVYPGWYDFPGLYATDADILFG
                     LGVGIGAFAGFGWGLNHWRADWLGRGVVHDDSPYRSFGRPFVERPSFLGSRLAFAHAG
                     GIHGGMWHGAFGVGNRGFNSANHGRIGGFAARGGFHIASGGFHGGGFHGGGRR"
     gene            complement(2194..2466)
                     /locus_tag="VHX39_32865"
     CDS             complement(2194..2466)
                     /locus_tag="VHX39_32865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995988.1"
                     /translation="MNRVFAVAFGGLVMLAAVTAYGQEPNSPAADPGYVFGIGPGADG
                     TAQEELQSPPLFTIGGLDGRIWAPVEPHYNGAANRDSAAEPFWNGG"
     gene            2754..3053
                     /locus_tag="VHX39_32870"
     CDS             2754..3053
                     /locus_tag="VHX39_32870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995989.1"
                     /translation="MNNVLLPLPLFARKPGAPLPGSMTVSIDPTWPVTNAGPLEVMIE
                     RPVDDEPVNCTCIAEAEAGSEARAVAWMPAPTNKTIVATATVLGIRQLSERVLFI"
     gene            3270..>3551
                     /locus_tag="VHX39_32875"
     CDS             3270..>3551
                     /locus_tag="VHX39_32875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995990.1"
                     /translation="MTSKNFMCDAKVGEREMWGLSVPDVVTESGRPLLMKSSDPHGGA
                     LMHPFQDFCRRTLHDIRVAGRYRSFTALRKVATRFPVYVRPDGTEVLIWS"
BASE COUNT          689 a         1076 c         1079 g          707 t
ORIGIN      
        1 ggcggagcca tgaattctgg cccaacggga tcggcaacgc acgatgcaac aatgcgatcg
       61 atctcctgca tggctgaggc atccagcttc cagcccgcta tctcgctcac cgcgtcgagt
      121 tggttcggcc ggcgtgcgcc ccacaaggcg aacgtgagtc cttcgcgatc cagcacccat
      181 cgcaccgcga gatggatcac acgctttccg taattgtctc gcgcaaaacg atcaagctgt
      241 tccactgcgg caatatactg attcaggcga ggtgcctgaa acttcgggtc gaaccgccga
      301 agatcgtctc cagtgaatgt cgtttcgcgc gtgatgcgtc ccgcgagaag cccgcgacac
      361 aacggaccgt atgccagtgt cgcaataccg ctgtctcggc agtacggaac gatgtccgca
      421 tcggcgcctc gttcaaacag gttgtatggc ggttgggccg tatgcaccgg cgctatggca
      481 cgaaaggtcc gcatctgtgc gacgctgaag ttactcactc cgatcgcgcg aattttcccg
      541 gcccgccaga gatcgagcat cgcctcagcg gtctcctcaa ttggcaattt gggatcaggc
      601 cagtgcacct ggtagaggtc gataacgtcg gtccgcagac gtcgcagcga gtcctcgacc
      661 tccttgcgga tacgtgcgcg gctggcattg cggaatacgt tgccgtcgtt ccaatccaac
      721 ccgactttgg tggcgatgca caccttgttt cgcgcgccga cctcggccag ggcctggccc
      781 acaagctctt cggcgtggcc gaagccgtag gccggggccg tgtcgatgag ggtgatgccg
      841 cgatcaaccg ccgattggat cgtggcgatc gcctgtgcgt cgtcggtgcc gccccacatc
      901 caccccccga tcgcccaggt tccgagggcg atacgagagg ggtttagttg ggtaccggga
      961 atggaagcga agtccatgga cgcagtctgt gacatcaaag tctcctgtgg ttgaagtgtg
     1021 ccgattatcc cgcggcgctg atggaatgtg agaactggtt gaactctgag cagtcggcac
     1081 caggttgcgc gcgcaccgtg tcagcgcatt ggctgatatg acttctggac ctcgcgttac
     1141 cttcgaccgc cgccatggaa accgccgccg tggaagcctc cgctggcaat atgaaagcca
     1201 ccgcgagcgg caaagcctcc gatccggcca tggttggcgc tgttgaagcc ccggttaccc
     1261 acgccgaatg ccccgtgcca catgccacca tggatcccgc cggcatgggc gaacgccagg
     1321 cgactgccaa ggaagctggg gcgctcaacg aagggccggc caaaggagcg gtaagggcta
     1381 tcgtcgtgga cgacgccgcg tccaagccaa tctgccctcc aatggttcaa gccccagcca
     1441 aatccggcga aggcccctat cccgacgccg aggccgaaca ggatgtccgc gtcagtcgcg
     1501 tacagcccag ggaagtcgta ccaaccagga taaacggcga gcggtgtgcc atagaccacc
     1561 catgggtcgt attcggggag ataaacagtc tcggcatccg cgggttgaat gacgatggtg
     1621 tccccttcgt aggttacgat ttcatggggc acgtgcatca gatttcccgc ctgctgggcg
     1681 cgccaacgca taacctggat ggcatggagg acattttgtg gatcgctcgc ataggcattc
     1741 cccaacgccg tgctccagac caggttcgtg tccatattcg ccagcaccaa cgggaattgt
     1801 gtcagtgcct tcacacttga atcccaggct tgctgatcga ccgcctgagc gaaaccggtt
     1861 ccgttgagtc cggaatgttg ccgcatccag cggtcggctc cgacgacttc actcggccag
     1921 gtggacgcag cgaggatctg cgcgacgagg ctatccgggt aaagtgcgat tggcgcgacg
     1981 agttgatcca attgctgcgc cgattcatcg actgtcagca acgatggcgc cggcgtcgat
     2041 tgcgccaccg cacacccggt ctgcgcggtg gccaggacga gcgatgcaga tacaagccat
     2101 gtgatactct gttttgaccg gttcatttct gacgctcctg ggcgcaaagt cagttggcgg
     2161 gccgcggcgg ccgacctgat tgtcgaagcg gaactatccc ccgttccaaa acggctctgc
     2221 ggccgaatcg cggttcgccg caccgttgta gtgcggttcc accggcgccc agatgcggcc
     2281 atccagtccg ccgatagtga atagtggcgg cgactgcagc tcctcttgcg cggtaccatc
     2341 cgcaccaggt ccgatgccaa acacataacc cggatcggca gccggtgaat ttggctcctg
     2401 accataagcc gttacggcgg ccagcatgac gaggccgcca aatgcaactg cgaagacccg
     2461 gttcattgtt ttgttcctat ccctgatggg ttgctgaagc acaacgttcc agtgccacct
     2521 gaacgtggtg ccgagcgatg cgaataccaa ttcgttgcgg tgattggcag atgctcaacg
     2581 tgcatatgtc atgacccggc tcaatacgtc catcacttgc atcaccgtat tgatacggat
     2641 ggagtagcag gcgcgagcca tgacagtatg cgcggcgaca ccgcgaggac ggaaggtaga
     2701 gatgcaagcc atgtcatctc ggtgtgaaga ccgtctgcgg cgcgccgcct gttgtgaaca
     2761 acgtgctgct gccgttaccg ttgttcgcca ggaagcctgg tgcgccgctg cccggaagca
     2821 tgacagtatc cattgacccg acgtggccgg tgacaaatgc ggggcctctc gaggtgatga
     2881 tcgagcgccc ggtggacgac gagccggtga attgcacttg tatcgccgaa gcagaagccg
     2941 gctccgaggc ccgtgccgtc gcctggatgc ctgctccgac caacaagacc atcgtcgcga
     3001 ccgcgacagt cctcggcata cgccaattga gcgagagagt tttgttcatt tgagtatcct
     3061 ttcctgaatt cgagctcggc tcgcctggtg gcgggcgctt cacctgctcg ggcttccggg
     3121 tctgatggag ttcccacctc cggctcgccg accggaaata ttgcgttgcg ccgctcgctc
     3181 tttgaggccg tgccggacac atggcgacat gcacgggagg gattgcccga gctgctcaga
     3241 ggttctcagg cggcttcagg ccatcgccaa tgacttcaaa gaacttcatg tgcgatgcaa
     3301 aggtcggcga acgtgaaatg tggggattgt cggtgccaga tgtcgttact gaaagtggtc
     3361 gcccgctttt gatgaaatcg tctgacccgc acggcggagc gctcatgcat ccattccaag
     3421 acttttgtcg gcgcaccctg catgatattc gcgttgcggg gcgctatcga tcgttcacgg
     3481 cactgcggaa ggtggcgacg cgtttcccgg tttacgttcg cccggacggc accgaggtgc
     3541 tgatatggtc a
//
LOCUS       DATAVD010001714         1535 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3323258, whole genome shotgun sequence.
ACCESSION   DATAVD010001714 DATAVD010000000
VERSION     DATAVD010001714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3323258"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            324..1058
                     /gene="tpiA"
                     /locus_tag="VHX39_32880"
     CDS             324..1058
                     /gene="tpiA"
                     /locus_tag="VHX39_32880"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019085537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEX3995991.1"
                     /translation="MRQLIAGNWKMNGLSGEAAGIVTPLRAGAERLACDLLVCPPFTQ
                     IAAVASLLAGSAVAVGGQDCHVNDKGAHTGDISAAMLRDAGASWVIVGHSERRQDHHE
                     SDSLIQAKTNAAIAAGLTPIVCVGETEAQRTAGDQNKVVGAQLAGSLPTGFTGVVAYE
                     PVWAIGTGKTATEADVAAMHLFIHTTLLQQLGSTGETIRILYGGSVRPANAGSLLAVP
                     HVGGALVGGASLNANDFLGIAKAAAA"
     gene            complement(1065..>1535)
                     /locus_tag="VHX39_32885"
     CDS             complement(1065..>1535)
                     /locus_tag="VHX39_32885"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3995992.1"
                     /translation="NAIFKGIERTSLEEWQTIIDVNLTGVFLCCKHIGGAMGQGGSVI
                     NVSSVAGHRGLMRSVPYCASKGGVEMLSKALALDWATKGVRVNTLAPGWVDTDLTHGL
                     LEHDVHGQRLRARTPMGRFAGPDDMAGGVVFLASDASSYMTGQSLVIDGGWTAS"
BASE COUNT          295 a          547 c          438 g          255 t
ORIGIN      
        1 cgccgtagtg tgcctgaact gcggcacgaa accctttcaa aataggggcg gatataggtg
       61 aatccgtcat gtcgcctcct gttgccacca tagcacgatc cgcctccgcg caggagcgcc
      121 gtcatcgacg gacgcaaata tttccacgag tgcatcgcat tcctccgccc gccacagtga
      181 ccactccgcc gcagcaggca aaagtcccat cggggccagc aaaaccggac gcgcaggcgc
      241 tcagaccgcc gtccgtgccc cacccgcctt gcatccagcg cgccaccagg ttcaatgcca
      301 tcaacaaact ctcggagacg gacatgcgcc aactgatcgc cggcaactgg aagatgaacg
      361 gcctgtccgg ggaagccgcc gggatcgtca cgccgttgcg cgctggagcc gaacgcctcg
      421 cctgcgacct gctggtctgc ccgccattca cccaaattgc cgctgtcgcc tcacttctgg
      481 ccggatcagc ggtcgcggtt ggcggccagg attgccatgt caacgacaag ggcgcccaca
      541 ctggcgacat ctccgcggcc atgcttcgag atgccggcgc cagctgggtg atcgtcggcc
      601 attccgagcg gcgccaggat caccacgaat ccgacagcct gatccaggcc aagaccaacg
      661 ccgccatcgc cgccggcctc accccgatcg tctgcgtcgg cgagaccgag gcgcaacgta
      721 ccgcaggcga ccagaataaa gtggtgggcg cccagttggc gggcagcctg ccgacagggt
      781 tcaccggtgt cgttgcctac gagcccgtct gggccatagg caccggcaag accgccaccg
      841 aggccgacgt cgccgccatg cacctgttca tccacactac cctgctccag caactgggct
      901 ctacgggcga aaccatccgc atcctgtatg gcggctcggt tcggccggcc aatgccggca
      961 gcctgttggc ggtgcctcat gtcggtggcg cattggtcgg cggtgccagt ctcaacgcca
     1021 acgattttct gggcatcgcc aaagccgctg cggcctgatc gggttcagct cgccgtccaa
     1081 ccgccatcga taaccagact ctgcccggtc atgtaggaag aggcatccga ggcgagaaac
     1141 accacgccac cggccatgtc gtctggcccg gcgaaccgcc ccatcggcgt gcgcgcgcgc
     1201 aatcgttgcc catgcacatc gtgttcgagc agaccgtgcg tcaggtcggt atcgacccaa
     1261 ccgggcgcca gcgtattgac ccgcacacct ttcgttgccc aatcgagcgc gagcgccttg
     1321 ctcagcatct cgacgccgcc cttcgaagca caatacggca ccgaccgcat caggccgcga
     1381 tgaccggcca ccgaactgac attgatgacc gagcctccct gccccattgc gccaccgata
     1441 tgtttgcaac aaaggaacac gccggtcagg ttgacgtcga tgatggtttg ccactcttcc
     1501 aggctggtac gctcgatccc tttgaaaatg gcatt
//
LOCUS       DATAVD010001715         4693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_722539, whole genome shotgun sequence.
ACCESSION   DATAVD010001715 DATAVD010000000
VERSION     DATAVD010001715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4693
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_722539"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..391)
                     /locus_tag="VHX39_32890"
     CDS             complement(<1..391)
                     /locus_tag="VHX39_32890"
                     /inference="COORDINATES: protein motif:HMM:NF016001.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family deazaflavin-dependent
                     oxidoreductase"
                     /protein_id="HEX3995993.1"
                     /translation="MADPKLAPKMQEWHIEHTNLYLSSGGKEGHIMKRTPPGYPEMDV
                     PSLLLTTTGRKSGEKFVFPLFYGTIGGSYIIVASKGGAPDHPGWYKNLVANPEVEVQV
                     ATKKFKAKARTAAGEERARLWPIALKFW"
     gene            complement(761..1969)
                     /locus_tag="VHX39_32895"
     CDS             complement(761..1969)
                     /locus_tag="VHX39_32895"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX3995994.1"
                     /translation="MTQAFAGVRIIDFSQVFSGPFATMQLGLLGADVIKIEEPTQGDQ
                     CRGIGADNDIGRAGMPPFYLAMNANKRSMTLDLKHKKAVEVIARLVKDADVVVQNFRP
                     GVIDRLGFGYEALRAIKPNLIFCSISGYGQTGPSSAAPAYDGAIQAVSGMMSVTGYPE
                     NGPTRVGFTVVDLSTAVMAAFAIAGALYRRAMTGEGQHLDVSMLDTSLALLAPLVSNY
                     LNIGAVPELVGNGSVVKLPSTGTFATECGGAFLLSAITNKQWTGIANAIERPDLATDP
                     RFQTVDGRCEHYDYLRPELQAVFATNTALHWEGRLNAEGVPASAIRSIPEIVEHPQVA
                     HRRAVDRVSSVAGVDRDIQLVRSGFIADADGPEINSPPPGKGEHTNAILHEAGYSEQE
                     IAMLREDGVL"
     gene            complement(2064..2594)
                     /locus_tag="VHX39_32900"
     CDS             complement(2064..2594)
                     /locus_tag="VHX39_32900"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3995995.1"
                     /translation="MLLQKLHHVAYRCTDVAETVDFYTKYLGLELVHALTNERLPSSG
                     VYAPHIHIFFAMADGSFIAFFEVPLADVAQEDRTGAAWAQHLALEVADMPTMMAAVQR
                     LRDGGIPVVGPIDHHFCQSVYFPDPSGHRLEMTVRSENVDEMAQYHREAAGIVAGWKD
                     RAAKEGWSRGKTSVAS"
     gene            complement(2612..3784)
                     /locus_tag="VHX39_32905"
     CDS             complement(2612..3784)
                     /locus_tag="VHX39_32905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3995996.1"
                     /translation="MQEPTYEWDRVPTIVRFADNAKFAETYGFAGSSGEIALEGQFLL
                     PRGKPSQTLYLFMHPSGLLHMLPMPAAVASAGLHVLCAGSRYPKNDSGLIMEKVALDM
                     GAWVRDAHARGYSKVILVGWSGGGSLSLFYQAEAETPSIRATPAGDPVDLVAAELIPA
                     DGVIFIAAHLSRAEVLTEWLDPSVLDEANPDRRDLTLDIYDPACPYQPPYSADFVARF
                     RAAQITRNRRITAWCEDMLARLQPPEVERCFVVHRTMCDVRWFDPAIDPNGRPVGNCY
                     MGDPRTVNVSPAGLARYSSLRSWLSQWSYDRSQAKGSVNAARIRRTPVLQIENQADDA
                     VPATHNPAIRAALATPDKEYVRIEGASHYYKGQPAQMDECLAALHDWSVRKGLLTA"
     gene            complement(3892..>4693)
                     /locus_tag="VHX39_32910"
     CDS             complement(3892..>4693)
                     /locus_tag="VHX39_32910"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3995997.1"
                     /translation="ALGLRGWRWLFLVDGLPAVLLGLFAMWVLTDRPENATFLSNEEK
                     ALVRDDLEADRRARGTSVSVTIMETLRNPRVWLMVVIYFCSVFLNVNNIWFPTILKSV
                     GMTSVANIGYVLSLAWAFGSIVVIVVCRNSDRVGDRKWHLLTTGLLSVAAYYALPLAH
                     DSVTLTAVLIGVGLAFGYANFMVFWTIPPVFLEARAAAMGIALISSVAQLGGLSGPAV
                     VGWIFQRTGSIYTGYAIAATALLIGTLLATFAIPHTRLRKPAQVAAAE"
BASE COUNT          998 a         1445 c         1333 g          917 t
ORIGIN      
        1 gccagaattt cagggctatc ggccaaagcc tggcacgttc ttcacccgcg gcagtacggg
       61 ctttcgcctt gaatttttta gttgcgacct gcacctcgac ctctggattg gcaacgaggt
      121 ttttgtacca cccgggatgg tcgggtgcgc cgcctttgga tgccacgatg atatagcttc
      181 caccgatggt cccataaaac agtgggaaga cgaatttctc ccctgacttc cggccggtgg
      241 tggtcagtag cagcgagggc acgtccattt ccggatagcc gggcggggtc cgcttcatga
      301 tgtgaccctc tttcccaccg ctgctgagat agagattggt atgttcgata tgccattcct
      361 gcattttcgg cgccagtttt gggtcagcca tcgtggtgtc tccgtttgaa tcccaggcac
      421 cataggcttg aaatcggaaa ccgaaagacc tgatcgttcg tcccggacgt cacgaaggtc
      481 tggcaaatgc cgtcgtggtt cccacggtca acgtcgatcc gcaccctgac agcataacgc
      541 cgatatcttc aatgttgagc gtctgttcct atccgggctg taacttcgcc atgagcaaaa
      601 acgttaacat aatttggggc gtggatggag tccagttcga tttgattgtt aattgaacat
      661 aagatgatgc atcgcaattg ccaacgaccg tacgatcaac ctgccgactt tcaggcaagg
      721 ttgctgtcat gtgaaatgac cctaaagtcg gacgcctgcc ttacagcact ccgtcctcgc
      781 gaagcatggc aatttcctgc tccgagtacc ccgcttcatg gagtatcgcg ttggtgtgct
      841 cgcctttccc gggcggagga gaattgattt ccgggccgtc cgcgtcagca atgaagcccg
      901 acctcaccag ttggatatcc cgatcaacac cggcaaccga ggaaacgcgg tcgaccgccc
      961 tgcggtgagc gacctgaggg tgctccacga tctctggaat actgcggatg gcagaggccg
     1021 gcacgccttc agcgttgagc cggccttccc agtgcagggc ggtattggtt gcgaaaaccg
     1081 cctgcaactc ggggcgcaaa taatcgtaat gctcacaccg accgtccacg gtctggaagc
     1141 gcgggtccgt cgccaggtca ggtcgctcga tcgcgttggc aatgccggtc cattgcttgt
     1201 tggtaatggc gctcaagaga aatgcaccac cgcattcggt cgcgaaggtt ccagtcgagg
     1261 gcagcttcac caccgagccg ttgccgacaa gttcagggac cgcgccaatg ttgagataat
     1321 tgctcaccag cggcgccaac agcgccagcg atgtgtcgag cattgacacg tccagatgct
     1381 ggccctcccc ggtcattgcg cgacgataca gcgctccggc gatggcgaag gccgccatga
     1441 ctgcggtgct caggtcaacg acggtgaagc ccacacgggt tggcccattt tcggggtagc
     1501 cggtcaccga catcatgccc gacaccgcct gtatggcacc gtcataggcc ggcgcggccg
     1561 aggaagggcc ggtctggcca taacccgata tcgagcaaaa gatcaggttg ggcttgatcg
     1621 cccgcagtgc ctcataacca aaacccagtc gatcgatcac acctgggcga aagttttgca
     1681 caaccacgtc ggcatctttg accaaccgcg cgatcacctc gacggccttc ttgtgcttga
     1741 ggtcgagcgt catggaacgc ttgttggcat tcatcgcgag ataaaacggc ggcatgccgg
     1801 cacgtccgat atcattgtcg gcgccaatgc cgcggcattg gtcaccttgc gtcggttcct
     1861 cgatcttgat cacgtccgcg cccagaagcc caagctgcat cgtcgcgaag gggcccgaga
     1921 aaacctgaga gaaatcgatg atccgaacac cagcaaatgc ctgggtcatg cgtcagccgc
     1981 tccatggtgg tggtcgcgca aagtcggttg ccgcacacag ggacttcagg tcgctcgcta
     2041 aaacgaccgc atcatgccca ggattaagat gccacgctgg ttttgccgcg tgaccagcct
     2101 tccttggcgg cgcggtcttt ccagccggcc acgataccag cggcttcgcg atgatattgt
     2161 gccatttcgt ccacgttctc gctgcgcacc gtcatttcca gccgatgccc tgatggatcg
     2221 gggaaataga ccgactggca gaagtgatga tcgatgggcc cgacaaccgg gatgccaccg
     2281 tcacgcagac gctgcaccgc cgccatcatg gtgggcatat ctgccacctc gagcgccaga
     2341 tgttgcgccc acgcggcacc ggttctgtct tcctgtgcca cgtcggccag tggcacttcg
     2401 aagaaggcga taaagcttcc atccgccatg gcgaaaaaga tgtggatatg gggcgcgtat
     2461 acgccggatg acggcaaacg ctcgttggtc agcgcatgga ccagctccag tcccagatat
     2521 ttcgtgtaaa aatccaccgt ttcggcgacg tccgtgcaac gataggcaac gtggtgcagc
     2581 ttctgcagta acatatccat tccctctttt gttatgctgt gagcagtccc ttccgcacac
     2641 tccagtcgtg cagcgcagcg agacattcgt ccatctgtgc tggttgcccc ttgtaatagt
     2701 gcgaagcgcc ttcgatgcgg acatattcct tgtccggcgt tgccagcgcg gcacggatcg
     2761 ccggattatg cgtggccgga acagcgtcgt ccgcttgatt ttcgatctgc aacactggtg
     2821 tgcggcgaat gcgcgccgcg ttgaccgagc ccttggcctg ggaccggtcg tagctccatt
     2881 gtgacagcca ggaccgcagc gaggaatagc gcgccagtcc agccggggag acgttgacgg
     2941 tgcgcggatc gcccatatag caattgccga ccggcctgcc gttcggatcg atggcgggat
     3001 cgaaccagcg cacgtcgcac atcgtacggt gcacgacaaa gcatcgttcc acttccggcg
     3061 gctgcagccg agccaacata tcctcgcacc aggcggtgat gcggcgattg cgggtgatct
     3121 gggctgcacg gaagcgggcc acaaagtcgg cgctgtacgg cggttgatac ggacaggctg
     3181 gatcgtagat atcgagcgtg agatcgcgcc ggtctgggtt cgcttcatcc agcaccgacg
     3241 ggtcgagcca ttcggtcaag acttccgccc gggacaaatg tgcggcaatg aaaatcaccc
     3301 catcagccgg aattagctcc gccgcgacca ggtcgaccgg atcgccggcg ggcgtggcgc
     3361 gaattgaggg cgtctcagct tcggcctgat aaaacaacga cagcgagccg ccgcccgacc
     3421 aaccgaccaa tatgaccttg gagtagccgc gggcatgggc gtcgcgcacc caggcgccca
     3481 tgtcgagcgc tactttttcc atgatcaggc cgctgtcgtt cttcggataa cggctgcccg
     3541 cgcacaacac atgaagtccg gccgaagcaa ctgcggctgg catcggtaac atgtgcaaca
     3601 ggccactggg atgcatgaac agatagagcg tctgggacgg cttgccgcgt ggcagcagaa
     3661 actgaccctc cagcgcgatt tcaccggacg aaccggcgaa accataggtc tccgcgaatt
     3721 tcgcattgtc cgcgaaccgc acgatcgtcg gcacacgatc ccattcgtaa gtcggctcct
     3781 gcataaccct tgcctccccc ggtacaggaa ctggtgacga ccagtctcac cacctttcgt
     3841 aatgctacag tgctttcagc aggactggaa atatcgagag agtccgcgcg tttactccgc
     3901 agccgccacc tgcgcaggct tccgcaatct tgtatgtggt atcgcgaacg tcgccagcag
     3961 cgtaccaatc agcaacgccg tcgcggctat cgcataaccg gtataaatgc tgccggttcg
     4021 ctgaaagatc cagcccacaa ccgcaggtcc cgacaggcca cccaattgcg caaccgaact
     4081 gatcagggca atccccatgg cggcggctcg cgcctcaagg aacaccggcg gaattgtcca
     4141 gaacaccatg aagttggcgt aaccaaacgc aagtccgacg ccgatcagta cggccgtcag
     4201 ggtgacgctg tcgtgcgcca gcggcagcgc gtaataagcc gccaccgaca agagacccgt
     4261 cgtcagaagg tgccatttcc gatcccccac ccggtcggag ttgcggcaca caacaatcac
     4321 tacaatcgaa ccaaacgccc aggcgagcga caggacataa ccgatattcg cgaccgaggt
     4381 catgccgacc gacttcagga tcgtcgggaa ccagatattg ttgacattca aaaataccga
     4441 acagaaataa atcaccacca tcagccacac gcgtgggttt cttaaagttt ccatgatcgt
     4501 gaccgacacg gaggtgcccc gcgcacgccg gtcggcctcc aggtcatccc ggaccagggc
     4561 cttctcctcg tttgacagaa acgttgcgtt ctccggccgg tcggtcagca cccacatcgc
     4621 gaacaatcca agcaacactg caggcagtcc gtcgaccagg aacaaccagc gccagccgcg
     4681 caaaccgagc gcg
//
LOCUS       DATAVD010001716         1747 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3514341, whole genome shotgun sequence.
ACCESSION   DATAVD010001716 DATAVD010000000
VERSION     DATAVD010001716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1747
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3514341"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            150..884
                     /locus_tag="VHX39_32915"
     CDS             150..884
                     /locus_tag="VHX39_32915"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3995998.1"
                     /translation="MLSIDGLALGFGGPPILEDVALRVAPGQIVSLVGPSGSGKSTIL
                     RAVMGLHNVTSGSITLAVPQDQVGMLFQDDALLPWRSAQDNVALGLRARGVPKIDRIN
                     QANEWLRRMSLAGLESRYPARLSGGQRKRVALAQVMVLGPKLILMDEPFGALDAIVRH
                     RITQDLLTLVENQGITVLLVTHDLEEALALSDAVYLLSAGPRARIAAHHIVDLPRPRD
                     LSAVHADPRFGPMVARLWNDLSLAAA"
     gene            881..1630
                     /locus_tag="VHX39_32920"
     CDS             881..1630
                     /locus_tag="VHX39_32920"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3995999.1"
                     /translation="MKRAPDWTIQCVAIVASLSLWEWAARAGRLNPFYAPAPSAIWAT
                     LWALIRGGEIWTHVVATFGAAMIGLVLGALIGTVLAALAVMARPVEILLAPLMGALNA
                     VPRIVLAPLLVIWFGIGVASKAALAVLLVAVLMFFAVFSAIAGVDRRLIERVRTLGGG
                     RWLVLREVYLPSVASLVLSSLKVAVGFAFTGAIVGEFVASSRGLGYLLSFAQSTYNTA
                     LSLALVGLIMVFVMALLSLAQALERRLTRWR"
BASE COUNT          268 a          511 c          572 g          396 t
ORIGIN      
        1 ggccggaccc gtgccgcact ttatccggtc aataccgtta tcgacacggc ggcctgtgat
       61 agggtcgccg aggcgctgaa attcattggt ttgatcaaac cggaaatcag tgcgtcgcag
      121 gtgttggacc tttcaatcgc ctccgcctga tgctttcgat tgacggcctc gccctcggct
      181 tcggtggccc ccccattctg gaggacgttg cgctacgcgt cgcccctggg cagatcgtca
      241 gtctggtcgg cccgtcggga tccggaaaat cgaccatttt gcgagccgtc atggggctgc
      301 acaacgtgac gtccggctcc atcactttgg ccgtcccaca agaccaggtt ggtatgctgt
      361 ttcaggacga cgctctgctg ccgtggcgct ccgcgcagga taacgtcgca cttggtctgc
      421 gcgcccgagg cgtaccgaaa atcgatcgca tcaaccaggc caatgaatgg ctgcgtcgga
      481 tgagcctggc tggcctggaa tctcgttatc ctgcccgcct ctccggcggc caaaggaagc
      541 gggtggcgct tgcgcaggtg atggtgctgg ggccgaaact catcctgatg gacgagccct
      601 tcggtgcact ggacgcgatc gtgcggcatc gcatcacgca ggacctgctc accctggtcg
      661 agaaccaggg aattacggtg ctattggtca cgcacgatct cgaggaagca ctggcccttt
      721 cggacgcggt ttatttgttg tccgccggtc cccgcgcgcg gatcgcagcg catcatattg
      781 tcgatctgcc gcgtcccaga gatctcagcg cggtgcatgc ggacccgcgg tttggcccaa
      841 tggtggcccg cctctggaac gatctgtcgc tggcggcggc atgaagcgcg cgcccgattg
      901 gaccatacag tgtgtcgcca tcgttgcgtc cctgtcgctg tgggagtggg cggcgcgagc
      961 aggccggctg aacccattct acgctccggc accgtccgcg atctgggcta cattgtgggc
     1021 tctgattagg ggcggcgaga tttggaccca tgtcgttgct accttcggtg ccgcaatgat
     1081 cggtctggtc ttgggtgcgc tgattggcac cgtattggct gcattggcgg tcatggcccg
     1141 gccggtcgag attttgttgg ctccgctgat gggtgcattg aatgcggtgc cgcgcatcgt
     1201 gctcgcacct ttgctggtca tctggttcgg cattggtgtc gcgtcgaagg cagcgctggc
     1261 ggtattgctc gtggcggtgc tgatgttctt tgcggtattc tccgccatcg cgggcgttga
     1321 ccgccgcctt atcgaacgag ttcgcacctt gggcggggga cgctggctcg tcctgcggga
     1381 agtgtatttg ccctcggtcg cgtctctcgt gctgtccagt ctgaaagttg cagtgggttt
     1441 cgcatttacc ggagcgatcg tcggcgagtt tgtcgcttcg agccgcgggc tgggatatct
     1501 cctcagcttc gcacaatcca cctacaacac ggcattaagc cttgcgctgg ttggcctgat
     1561 catggtgttc gttatggcat tactgagcct ggcgcaggcg ctggaacggc gactgacccg
     1621 ctggcgctga ggcctggctg agtgacacgg ggaaggtttc gcgcggcccg ccgcgtgggt
     1681 cggtcaatca acgacgatcg catgaagcga agcgatcaaa gggaggcaac gatggcgatg
     1741 ttggctt
//
LOCUS       DATAVD010001717         1542 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2586608, whole genome shotgun sequence.
ACCESSION   DATAVD010001717 DATAVD010000000
VERSION     DATAVD010001717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2586608"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..>1542)
                     /locus_tag="VHX39_32925"
     CDS             complement(40..>1542)
                     /locus_tag="VHX39_32925"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3996000.1"
                     /translation="DARGSHENRLESFDETIDELPSRRWWALAVVAIAQLMVVLDGTV
                     VTIALPSAQRALHISNVDRQWAITSYTLAFGGLLLLGGRIADYLGRKRIFLVGLIGFA
                     AASALGGAAQNGATLFGARAIQGLFAALLAPAALSLISVTFTEVKERSQAFAVYGAIS
                     GGGAAIGLILGGTLTEYASWRWCLFINIPIAAVAFVAGTILVTESKSARGSSYDIPGA
                     ILGTAGLVALVYGFTEAAKTGVGWLSAEAISYLAGAAILLIGFVLVELRSSSPLLPMR
                     VVLDRNRGGTYLASLLVFAGLFAMFLFLSYYFQANLGYSALKSGVAVLPFSGGVIVTS
                     GVVSSLLPRTGPKPLMLVGLAMATGGLATLTSITDTSSYAATVLPGELLISVGLALVL
                     VPLSSLALTGVGNNDAGVASAVLNSTQQIGGSLGTSLLNTFYASAVSSYVVAHHLNPS
                     GFNPSAAIHGYHVAFWIGVGLMAGAFVAILVLVNAGKDDITTQPGTPADT"
BASE COUNT          313 a          498 c          487 g          244 t
ORIGIN      
        1 tgctggtctt tgctcatcag tacctctcct atcgttgggt caggtatcag ccggtgtgcc
       61 gggctgcgtg gtgatgtcgt ccttgccggc gttgaccaag accagaatgg cgacgaacgc
      121 gccggccatc agcccgacac cgatccagaa tgcgacgtga tagccgtgga tggccgcgct
      181 cgggttgaag cccgaggggt tgaggtgatg agccacgacg taggaggaga ccgcacttgc
      241 atagaaggtg ttcaacagcg aggtacccag agatccgccg atctgctggg tcgagttcag
      301 cactgcgctt gcgactccgg cgtcgttgtt gccgacgccg gtgagtgcga ggctcgacag
      361 cggcaccaac acaagcgcca gaccgacgct gatcagcagt tcgccgggca gaacggtcgc
      421 tgcgtagctg ctggtgtccg tgatggacgt cagcgtcgcc aggccgccgg tggccatggc
      481 caacccgacc aacatgagtg gcttgggccc cgtgcgcggc agcagagatg acaccactcc
      541 agacgtgacg atcacgccac cgctaaacgg caggaccgcg acacccgact tgagtgcgct
      601 gtaacccagg ttcgcctgaa agtagtagct caggaacagg aacatcgcga acagcccggc
      661 gaagacgagc agtgaagcga ggtacgtgcc gccgcggttg cgatcgagca caaccctcat
      721 cggcagcagt gggctcgagg atcgcaactc gaccagcacg aatccaatca gcaagatcgc
      781 ggcgccagcc aagtaactga tcgcctcggc cgacagccag ccgacacccg tcttagccgc
      841 ctcggtaaat ccgtacacca gcgctacgag cccggcggtg ccgaggatcg cgcccgggat
      901 gtcgtatgaa ctcccccgcg ccgatttgct ctcggtgacc aggatcgttc cggcgacgaa
      961 cgccaccgcc gcgatcggaa tgttgatgaa taggcaccac cgccacgagg cgtactcggt
     1021 cagggtgccg cccagaatta agccgatcgc agcacctccg ccggagatcg cgccataaac
     1081 cgcgaaggcc tgcgaccgct ccttcacctc ggtgaatgtc actgagatca gcgacaaggc
     1141 agcgggcgcg agcagcgccg cgaacagacc ctggatagcg cgggcgccga acagggtcgc
     1201 gccgttctgc gcggcgccgc caagcgccga tgctgccgcg aagccgatta gcccgaccag
     1261 gaagatccgc ttgcggccga ggtagtcggc gatccgtccg ccgagcagca acaggccacc
     1321 gaacgcaagc gtgtacgacg tgatcgccca ctgtcgatcg acgttcgaga tgtgcaacgc
     1381 gcgttgcgcc gagggcagtg caatggtcac gacagttccg tctagtacca ccatcagttg
     1441 ggcgatcgct acaactgcca gcgcccacca ccggcggctt ggtagttcgt cgatcgtctc
     1501 atcgaacgat tcgagtcggt tctcatggct gcctcgcgcg tc
//
LOCUS       DATAVD010001718         2971 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2586675, whole genome shotgun sequence.
ACCESSION   DATAVD010001718 DATAVD010000000
VERSION     DATAVD010001718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2971
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2586675"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            510..1307
                     /gene="mazG"
                     /locus_tag="VHX39_32930"
     CDS             510..1307
                     /gene="mazG"
                     /locus_tag="VHX39_32930"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HEX3996001.1"
                     /translation="MDDAISAEAELRRLLAIMAALRDPATGCPWDNEQTFDTIAPYTI
                     EEAYEVADSIARRDFASLPDELGDLLFQVVYHARMAEEAGYFAFADVARAISDKMVRR
                     HPHVFGDSAARDAAAQTAAWEVQKSAERAARQETGTLAGVPVGLPALTRAEKLTNRAA
                     RVGFDWPDAEAVLAKLDEEIGELKAELADANPARLTDEVGDLLFVLANLARKLKLDPE
                     ACLRHANDKFARRFNAMEQTLAQEGRDLKGETLAAMETAWQTVKRRE"
     gene            1423..>2971
                     /locus_tag="VHX39_32935"
     CDS             1423..>2971
                     /locus_tag="VHX39_32935"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004474 - malate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006097 - glyoxylate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase G"
                     /protein_id="HEX3996002.1"
                     /translation="MPRITVAGLKIDQCLFDFVANEALPGTGIEVSAFWSGFATVLAD
                     LGPRCAALLAERDRLQTVIDAWHVEHRGKPFDQTEYFGFLRGIGYLTEEPPDFAVTTA
                     NVDPEIATIAGPQLVVPVTNARYALNAANARWGSLYDALYGTDALPEDDGASRSGGFN
                     EVRAARVVAKARAILDDAVPLVQGSHADATGYACAAGALAVTLQDGSQTGLRHPHEFV
                     GYSGDPGDPSAIVLKHHGLHFELLIDRSRRIGGMDRAGIADVIVEAAITTIQDLEDSI
                     AAVDAEDKILAYRNWLGLMKGDLQDSFEKGGRTMTRALHPDRHYIKPDGGTLWLAGRS
                     LMLVRNVGHHMYTDAVLDAGGKEIPEGFLDAAVTSLIAMHDLRGTGPLRNSHAGSVYI
                     VKPKMHGPLEVALTADLFAHVETLLGLPANTLKMGIMDEERRTSANLKACIAAARERV
                     AFINTGFLDRTGDEIHTSIEAGPMIRKNDMRGTKWIKVYEDQNVDIGLQCGLHGKAQI
                     GKGMWAAP"
BASE COUNT          613 a          952 c          887 g          519 t
ORIGIN      
        1 acgcgatacc gcgcctctcc tcgactctac tgcctctgaa cctcttaaat aaaatcttgc
       61 tttcggtgcc aaacgaatcc gagccgtcac gaagtggcac ccagccaacg acatcgtatc
      121 gatcggcgaa gtaagaattt atttaagagg aacagagaag gtcaagtgtt ccaggccggt
      181 gcacccgaat gtacttacgc tcttaatgcg gctgtgttcg aataattttt tcacgtttga
      241 tataccccgc aacacgacgc gagcttttcg cggtcatcgg gcattggaaa atattacatc
      301 atccattcca agtccaggtg agagcacgaa atggagcagc gcgtgctgag cgagaaacct
      361 ccaatactcc ggccgcggaa tgttcactcg cccacacgcc gacaacgcaa aacgcgatcc
      421 gttttatccc aaccgcccac cggtcgccgc gacgcaacac aatccggccg cctcttgcgc
      481 gggccgccga gcccccgtat ccggcaaaca tggacgatgc gatctctgcc gaagcggaac
      541 tccgccgact gcttgcgatc atggccgcgc tacgcgatcc ggcgaccggc tgcccgtggg
      601 acaacgagca gaccttcgac accatcgccc cgtataccat cgaggaagcc tatgaggtcg
      661 ccgactcgat cgctcgccgc gatttcgcct cgcttcccga tgaactgggc gatctgctgt
      721 tccaggtcgt ctatcacgca cgcatggccg aggaagccgg ctatttcgcg tttgccgacg
      781 tggcccgcgc gatcagcgac aagatggtcc ggcgccatcc gcatgtgttt ggtgattccg
      841 ccgcccgaga tgccgcggcg caaacagccg cgtgggaagt gcagaagtcg gccgaacggg
      901 cggcccggca ggaaaccggc acgctggcgg gtgtgccggt tggccttccc gcgttgacgc
      961 gggccgagaa actgaccaat cgcgccgccc gcgtcgggtt cgactggccc gatgccgagg
     1021 cggtactcgc caagctggac gaggaaatcg gcgaactgaa agccgagttg gcggacgcaa
     1081 atccggcccg gctgaccgac gaggtcggcg atttgctctt cgtgctggcc aatctggcgc
     1141 ggaagctgaa gctggatccc gaggcgtgct tacgccacgc caacgacaag tttgcccgcc
     1201 ggttcaatgc gatggaacaa acgctggcgc aggagggccg cgatctgaag ggcgaaacgc
     1261 tggcggcgat ggaaacggcg tggcagacgg tcaagcgcag agagtaaacg acggcactcc
     1321 acaccatctc accttttctg ttccccaaaa tgctgcactg cactatcctc cttcgcaccc
     1381 gcggaatttt ccgaccgagg ggccgcaaag gaaagtgccg acatgccccg gattaccgtt
     1441 gccggactga agatcgacca gtgtctattt gattttgttg caaatgaggc cctccccggc
     1501 acaggcatcg aggtctccgc cttctggtcc ggctttgcca ccgtactcgc cgacctcggc
     1561 ccgcgctgcg cggccttgct ggccgagcga gaccgcttgc aaacagtcat cgacgcctgg
     1621 cacgtcgagc accgtggcaa accgttcgat cagaccgaat atttcggctt cctccggggc
     1681 atcggatacc tgaccgagga accaccggat tttgccgtca ccactgccaa tgtcgacccc
     1741 gaaattgcga ccatcgccgg tccccaactc gtcgtgccgg tgaccaatgc ccgctacgcc
     1801 ctgaacgcgg caaacgctcg ctggggatcg ctgtatgacg cgctgtatgg caccgacgcg
     1861 ctgcccgagg atgatggcgc ctcccgctcc ggcggcttca acgaagtccg cgccgcccgc
     1921 gtcgtggcca aggcacgggc gatcctcgac gacgcggttc ccctggttca gggtagtcac
     1981 gcagacgcaa cgggttatgc ctgtgccgca ggagcgctcg ccgtcacgtt gcaggacggc
     2041 agccagaccg gtctcaggca cccgcacgag tttgtcggtt actctggcga tcccggcgat
     2101 ccctccgcca tcgtgctgaa acatcacggc ctgcacttcg aattattgat cgaccgcagc
     2161 cgccgcattg gcgggatgga tcgcgccggc atcgccgatg tcatcgtcga ggcagcgatc
     2221 accacaatcc aggacctgga agattccatc gccgccgtgg acgccgagga caagatcctg
     2281 gcctaccgca actggctcgg gctgatgaaa ggcgacctgc aggacagctt cgagaagggc
     2341 ggccggacca tgacgcgggc gctccatccc gaccggcact acatcaaacc cgacggcggc
     2401 acattgtggt tggctggccg cagtctgatg ctggtacgca acgttggcca tcacatgtat
     2461 accgatgcgg tgctcgacgc aggcggcaag gaaatcccgg aaggatttct tgacgcagcg
     2521 gtcacctcgt tgatcgcaat gcacgacttg cgcggcacgg gcccattgcg gaacagtcat
     2581 gccggctcgg tctatatcgt gaaaccgaag atgcacgggc cgctggaagt ggcgctgacc
     2641 gccgatctgt tcgcccatgt cgagacactg cttgggctgc cggcgaacac gttgaaaatg
     2701 ggcatcatgg atgaggaacg gcggacctcg gccaacctga aagcctgtat cgcagcagcg
     2761 cgggaacgcg tggcattcat caacacagga ttcctcgatc gcaccggcga tgagatccac
     2821 acctcgatcg aagccggccc gatgatccgc aagaacgaca tgcgcggcac gaagtggatc
     2881 aaggtgtacg aggaccagaa cgtcgatatc ggcctgcaat gcgggctgca cggcaaggcg
     2941 caaatcggca agggcatgtg ggcggcgccg g
//
LOCUS       DATAVD010001719         4895 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1463187, whole genome shotgun sequence.
ACCESSION   DATAVD010001719 DATAVD010000000
VERSION     DATAVD010001719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4895
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1463187"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..617
                     /locus_tag="VHX39_32940"
     CDS             <1..617
                     /locus_tag="VHX39_32940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidase M61"
                     /protein_id="HEX3996003.1"
                     /translation="DTLIRELSGGQRSLDNFAAAFFGGSDGQFVPQTYTFADVVSALN
                     AVQPHDWRAFLQERLDGHGGAPLDGIARGGYSLIYSDTESEYFKKSEARRKVTDFSYS
                     LGFAIGRENRLIDVMWGGPAYSVGLTVGTQIVAVNSVAYDGDRLKDIMKHARTDPAAI
                     ELLVRNGDRYTTVRIDYHDGLRYPHLKQTQGTPARLDQILAPRG"
     gene            674..1255
                     /locus_tag="VHX39_32945"
     CDS             674..1255
                     /locus_tag="VHX39_32945"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3996004.1"
                     /translation="MDELAHLNPPAALPAILARTEALAFPMPSEPRTGAMLRVLAASK
                     HGGRLLELGTGTGLCTAWLLDGMDRDARLTSVDVDPEVQSVARDCLGGDERLQIVTMD
                     AGGFLRAQSAETFDLIFADAMLGKYDLLDEALALLRPGGLYVIDDMLPQESWPEDHAP
                     RVPRLVADLAGRPDFRIVSLAWSSGLVVVARQH"
     gene            1294..2091
                     /locus_tag="VHX39_32950"
     CDS             1294..2091
                     /locus_tag="VHX39_32950"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX3996005.1"
                     /translation="MADAPEPLVLYECRDRVATITFNRPSRLNAFNDDMTREALAAMA
                     RFDLDPEADVAVLTGAGRAFSSGADVQQRQLRPREEMEKHGGPQARDANSENLLTDCV
                     NWKPVICAAHGYVLGLALGIALECDLIVAEDGTKFQVTEAPRGLSGAKYWALLNFRGG
                     GSLAVQVSLTGRFFTAEEALRVNIIDQVAPKGEYLAAAQELARSIAKNPPLGVRHTVQ
                     LRRWELKKVQQEAVRTVRAAKLNLSEDFLESARAFVEKRPAGPFKGR"
     gene            2095..3108
                     /locus_tag="VHX39_32955"
     CDS             2095..3108
                     /locus_tag="VHX39_32955"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEX3996006.1"
                     /translation="MRRNLLLDDDAPGTVRLTEAQARAVAMKALERCGYGVVDATIIT
                     DQLVDNALCGYKFASLPRILTIAEEARNRQTRTAPAIVRETASSALVDGGNTIGYIAA
                     FRGAEIAARKAKDTGLSIVGVFNSFYSGRNAWYVETIVKHDLVAIHTCSASPRVLPPG
                     SRAPLLGTNPISIGFPSTNGPVVWDIGTASVMWGDVQLMARLGHELPEGTGFDQNGNP
                     TRDASAVLKGGVAPWGGHKGYGLSFCIQALGLIAGAALGRGVVNDYGFLFIAIDPGLT
                     QPDNAFQQQMTELVETIKALPKQAGVDEIRIPSERAFQERARRRVEGIVMEQKIVDML
                     EAL"
     gene            complement(3125..4390)
                     /locus_tag="VHX39_32960"
     CDS             complement(3125..4390)
                     /locus_tag="VHX39_32960"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HEX3996007.1"
                     /translation="MGSIGRLMVVLCLLLAGCAGERTVVLGTGSGPADDLAVQRAVQR
                     DIDHAPPVDGNRVDLLRDGAQAFPAMFDAMEHAQDSINLEFYTFDDVRSGGRSLGDVL
                     VDRLRRGVAVSVIYDAIGSNETPAAFIDRLARSGARMVAFNYDPLAGAKFANPNDRDH
                     RKLMVVDGRIGFMGGINLNHLYEYPRPPLGSDRPWVRDTAVRITGPVVADMQRVFFAT
                     WAHQHGPPLPSRNWFPTLAPTDDETVRILASQPGDDKPLYYVWLLNALHAARRSISLS
                     TGYFVPTHQERVELARAARRGVRVRLVLPGQSDSEDAIAAGRAAYGDLLEAGVDIYEL
                     QNAVLHSKFIIIDGVSMAIGSSNFDRRSAVFNNELDAIVLGSRVADGEALFDQDIAMS
                     RKIDLQTWRSRPMGERMLEWRARLWEFLL"
     gene            complement(4531..>4895)
                     /locus_tag="VHX39_32965"
     CDS             complement(4531..>4895)
                     /locus_tag="VHX39_32965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007400434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEX3996008.1"
                     /translation="EKTNARYLTAAVVSDPIEALVCDASFIGLATVLPACLALCTPRA
                     WAVALIKPQFEAGPGAVGAKGVVRDPAVHHSVCEHIRAWWSCLPGWEVLGIVESPITG
                     PEGNKEFLIAAQFAGIGG"
BASE COUNT          962 a         1479 c         1554 g          900 t
ORIGIN      
        1 tggacacctt gattcgcgaa ctctccggtg gccagcggtc gctggacaat ttcgccgcag
       61 cattttttgg cggcagtgat gggcagttcg tgccgcagac ttataccttc gccgacgtgg
      121 tcagtgcgct gaacgcggtg cagccgcatg actggcgagc gtttttgcag gagcgcctgg
      181 acgggcacgg cggcgcacca ctcgatggca tcgcacgcgg cggctattcg ttgatttatt
      241 cggatacaga atcagaatat ttcaaaaaga gcgaagcgcg ccgcaaggtc accgatttca
      301 gctactctct cggatttgct atcggccggg aaaacaggct gatcgatgtg atgtggggcg
      361 gcccagcgta ttccgttggg ttgacggtgg gaacccagat cgtcgcggtg aacagcgtgg
      421 cttatgacgg cgatcgtttg aaggacatca tgaagcacgc acggacagac ccggctgcga
      481 ttgagttgct ggtcaggaat ggggatcgct atacgaccgt gcggatcgat tatcatgatg
      541 ggctgcggta tccgcatctg aaacaaaccc aggggacgcc ggcgcggttg gatcagattc
      601 tggccccgcg cggttaagtc gaaccgagct tcggtcggtg ggcaatctgt tcggccccgt
      661 gtaaactccc ggtatggatg aacttgccca tctgaaccct cctgccgcgc tgccggcaat
      721 cctggcacgc accgaggcac ttgcgttccc gatgccatcc gaaccgcgaa ccggtgcaat
      781 gttgcgcgtg ctggccgcgt cgaaacatgg cggccggttg ctggaactcg gcaccggtac
      841 tgggctctgt acggcgtggc tgctcgacgg tatggatcgg gacgcccgct tgaccagcgt
      901 ggacgttgac ccggaggtgc agtccgtggc gcgcgactgc ctcggcggtg acgaacggct
      961 acagatcgtt acgatggacg ccggcggttt cctgcgcgct caaagcgccg agacgttcga
     1021 tctgatcttc gccgacgcca tgttgggaaa gtatgacctg ctcgacgaag cgctggcgtt
     1081 gctgcgcccc ggcggactgt acgtcattga cgatatgctg ccgcaggaga gctggcccga
     1141 agatcacgca ccgcgcgtac cgcgcctcgt cgccgacctg gcgggccgcc cggatttccg
     1201 catcgtcagc cttgcctgga gcagcggact ggtcgtggtt gcccgccagc actgatccga
     1261 ccaccatggc cggtgaagca caggagacga gccatggcag acgcacccga accgctggtg
     1321 ctgtacgaat gccgcgaccg cgtcgcgacc atcacgttca accggccctc gcggttgaac
     1381 gcattcaacg acgacatgac gcgcgaagct ctggcggcga tggcgcggtt cgaccttgac
     1441 cccgaggcgg atgttgctgt gctgaccggt gccggacggg cgttttcgtc cggcgccgac
     1501 gtgcagcaac ggcaactgcg gccgcgcgag gaaatggaga aacacggcgg gccgcaggct
     1561 cgtgatgcca attcagaaaa tctgctgact gactgtgtga actggaagcc ggtgatctgt
     1621 gccgcgcatg gctacgtatt gggtctcgca ctgggcattg ccctggagtg cgatctgatc
     1681 gttgcggaag acggcacgaa attccaggtc accgaggcac cgcgcggact gtccggcgcc
     1741 aagtactggg ctttgctgaa ttttcgcggc ggcggctcgc tggcggtgca ggtcagcctg
     1801 accggccggt tctttaccgc cgaggaagcg ttgcgcgtga acatcatcga tcaggtcgcg
     1861 ccgaaagggg aatatctggc ggcagcgcag gaactggcac gcagcatcgc gaagaatccc
     1921 ccgttaggag tacgtcatac ggtgcaattg cgacggtggg agctgaaaaa ggtgcagcag
     1981 gaagcggtgc gcaccgttcg cgctgcgaaa ttgaatttgt ccgaggattt tctggagtcg
     2041 gcccgcgctt ttgtcgaaaa gcggcccgcc ggcccgttca aaggacgctg accgatgcgg
     2101 cgcaatttac tgctggatga cgacgcgccg ggcactgtcc gattgaccga agcccaggcc
     2161 agggcggtcg cgatgaaggc gctggagcgg tgcggctatg gcgtggtcga tgcgacgatc
     2221 atcaccgacc agctcgtgga caatgcgctg tgtggctaca agtttgccag tctgccgcgg
     2281 attctgacga tcgccgaaga agcgcgcaac cggcagacgc ggaccgcgcc ggcgatcgtt
     2341 cgcgagacgg catcctcggc gttggtcgat ggcggcaaca cgatcggata catcgcggcg
     2401 tttcgtggcg cggagatcgc ggcgcgcaag gccaaagaca ctggattgag catcgtcggc
     2461 gtgttcaaca gtttctacag cggacgcaac gcgtggtacg ttgaaactat cgtgaagcac
     2521 gatctggtgg cgatccacac ctgcagcgcc agccctcgtg ttcttccacc cggcagccgg
     2581 gcgccattac tgggcacaaa cccgatctcg atcggatttc cgtcgaccaa tgggccggtg
     2641 gtgtgggata tcggcactgc ctcggtgatg tggggcgacg tgcaattgat ggcacgcctg
     2701 ggtcacgaac tgccggaagg cacgggtttc gatcagaacg gcaatccgac gcgcgatgcg
     2761 tccgcagtct tgaagggtgg ggttgcaccg tggggcgggc acaagggcta cggcctatcg
     2821 ttttgcatcc aggcgcttgg cctgatcgcc ggagccgcgc ttggccgagg tgtcgtcaac
     2881 gactacggat tcctgttcat cgccatcgat cctggcctga cccagcctga caacgcattc
     2941 caacagcaaa tgaccgagct ggtcgaaacg atcaaggcgc tgccgaaaca agcgggcgtg
     3001 gatgaaatcc gcatcccctc ggagcgcgcg tttcaggagc gcgcgcggcg gcgggtggag
     3061 ggcatcgtaa tggagcagaa gatcgtcgac atgctggaag cactgtgaac cggcgtggtg
     3121 gtaattataa caaaaactcc cacaatcggg cgcgccattc gagcatccgt tcgcccatcg
     3181 gtcgcgaccg ccaggtttgc aaatcgattt tccgcgacat ggcgatatcc tgatcgaaca
     3241 atgcctcacc atcggcgact cgcgatccga gcacgatcgc gtcgagctca ttgttaaaga
     3301 cggcgctgcg gcgatcgaaa ttggatgagc cgatcgccat cgacacgccg tcgatgatga
     3361 tgaacttgga gtgcagtacg gcattctgta attcatagat atccacaccg gcctccaaca
     3421 gatcgccgta cgccgctcgg ccggcagcaa tggcgtcttc cgaatcactt tgacctggca
     3481 acaccaggcg aacccgcacg ccacgccgtg ctgcgcgagc cagttcgaca cgctcctgat
     3541 gcgtgggaac gaaataaccg gtgctgaggc tgatactccg gcgagccgca tgcaatgcat
     3601 tcagcagcca cacgtaatac agcggcttgt cgtcgccggg ttggctcgcg aggatgcgga
     3661 cggtttcgtc gtcggtcggc gccagcgtgg gaaaccagtt gcgcgagggc aacggcgggc
     3721 cgtgttggtg cgcccacgtt gcgaaaaaca cccgttgcat atcggcgaca accgggccgg
     3781 tgatgcgcac cgcggtatcg cgcacccatg gccgatcgct gcccaagggc ggccggggat
     3841 attcgtaaag gtgattaaga ttgatgcccc ccatgaagcc gatccgtcca tcgacaacca
     3901 tgagcttgcg atgatcgcga tcgttggggt ttgcaaattt agcaccggcg agcgggtcgt
     3961 aattgaacgc caccatgcgg gcaccggatc gtgcaagacg atcgatgaac gcggccggtg
     4021 tttcattgga accgatcgcg tcgtaaatga ccgatacggc taccccccgg cgaagacggt
     4081 cgaccagcac atcgcccaaa ctccgcccgc cgctgcgcac atcgtcgaat gtgtagaatt
     4141 ccagatttat gctgtcctgg gcgtgctcca tcgcgtcaaa catggccgga aaggcctgtg
     4201 ctccatcacg cagcaagtcc acccggttgc cgtcgaccgg cggtgcatga tcgatatccc
     4261 gctgcaccgc gcgttgcacc gcaaggtcgt ctgcaggtcc cgatcccgtg ccgagcacaa
     4321 cggttcgctc gcccgcacaa ccggcgagca gcaggcacag gacaaccatc aaacggccga
     4381 ttgaacccat gggccttgcc tcgggtaatt caattcatcg tcgtgacccg gttttgccgg
     4441 atgccggcac cagcccacgc gtccagcagc atccgacccg accccggcaa acctgcacaa
     4501 ttccgcaacg gttcccgaga cgttgcatga tcaacctccg atcccggcaa actgcgccgc
     4561 aatcagaaat tccttgttcc cttccgggcc tgtgatgggg ctttccacaa tgcccaatac
     4621 ctcccagccc ggcaggcagc tccaccacgc ccggatgtgt tcacagacag aatgatgcac
     4681 cgcaggatct cgcaccacgc ctttcgcgcc gaccgcaccg ggcccggcct cgaactgcgg
     4741 tttgattagc gcgacagccc aggcgcgcgg cgtgcaaagg gccagacatg cgggcaggac
     4801 ggtggcgagc ccgatgaaac tggcgtcaca gaccagggcc tcgatcggat cggagaccac
     4861 ggcagctgtg aggtaccgtg cattggtctt ctcgt
//
LOCUS       DATAVD010001720         3218 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1837549, whole genome shotgun sequence.
ACCESSION   DATAVD010001720 DATAVD010000000
VERSION     DATAVD010001720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3218
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1837549"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..548)
                     /locus_tag="VHX39_32970"
     CDS             complement(114..548)
                     /locus_tag="VHX39_32970"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3996009.1"
                     /translation="MTLACAEQDDVLRIDSASPGDLDRLHPWFDAVSGRMPPTIRHGM
                     RVALEEVVLNAANHGFTANAPGEITVRLQIGPLSAALCVEDSGRPFDPAKAPARPPSA
                     HLLDATPGQLGLVLLHHYCHDLTYERVGQRNRLIMRFPFPAT"
     gene            complement(545..925)
                     /locus_tag="VHX39_32975"
     CDS             complement(545..925)
                     /locus_tag="VHX39_32975"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEX3996010.1"
                     /translation="MPRSPNGQTIVMPISVLDLDGSVTKVVITGRIDIAGAREIEMPM
                     AVVAGSRRAVVVDLSAVEFMASLGLRGIVVSARSIISKRGKIVLLMPQPQVEEVITTT
                     GIDQLIPIYHDETDAIAAVIATIG"
     gene            1369..2655
                     /locus_tag="VHX39_32980"
     CDS             1369..2655
                     /locus_tag="VHX39_32980"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEX3996011.1"
                     /translation="MSVTSRSLRIADSVADMAGLLRRPLRIEDLIARAQRESGHWDFG
                     DTGWVEPLRRLLTACSASEADLSLIGQLATRWDVVRFLSNLLRFHAEETKQPEISTQK
                     IERPIFITGLPRSGTTFLHRLMMTDPDNRAPLVWETIFPWPNATGPDRRVARVARQLS
                     MFEWLAPEFRALHPLDATSPQECSEITAHVFRSLRFDTNYHVPAYRRWLDADVRRHLP
                     AYQFHRRFLSHLQYQDRTRRRWVLKCPEHVFALRAIRTVYPDARLIFVHRDPVKVLLS
                     VAHLTEVLRRPFARSLDPKQIGRDESERWLAGARRMMDIGDDAGLPESVCHVHHMDLI
                     SDPVATVESVYHHFGMSLPEAAAGAIDRYVAERPNGGYGPRNYAFEDHGLDEAVEREQ
                     FRPYMLRFGIAAEVASDQFRQGLVTSAKTSASTTQA"
     gene            complement(2659..>3218)
                     /locus_tag="VHX39_32985"
     CDS             complement(2659..>3218)
                     /locus_tag="VHX39_32985"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX3996012.1"
                     /translation="TTAVTLFWACLMLANAGEVQDWMAEELFDVDLTEDGVQTRLVRT
                     RAVVNETLRLFPAAFTLVRETILPDRIGTLQLPRRTVVMIAPWVLHRHHAFWTDPSAF
                     DPTRFMPEAPPPPRFAFMPFGAGPRICVGAQFAMAEAVLVLAALVQRFRVTLRDEQPI
                     MPVAVVTTQPDHAPLFQLARRSKPQ"
BASE COUNT          598 a          972 c         1006 g          642 t
ORIGIN      
        1 gcgtcacgga tcgcctccgc gtcctcagcg cactccgcga tctcggtgtt attgcctttg
       61 ttgccgcagg cgcgcaccca tccactgggc cggatcgaga aaaattggcg cgatcaggtc
      121 gccgggaacg gaaaccgcat aatcagtcga ttgcgctgcc cgactcgctc ataagttaga
      181 tcgtggcagt aatgatgcag caacaccagg cccagttggc ccggggtggc gtcgagcagg
      241 tgggctgatg gcggacgggc gggcgccttg gcggggtcga agggacggcc ggaatcctcg
      301 acgcaaagtg ccgcagaaag cggcccgatc tgcaaccgca cggtgatctc gcccggtgca
      361 ttcgcggtaa acccgtggtt ggctgcgttc aggaccactt cctccagcgc gacccgcata
      421 ccgtgccgga ttgtcggcgg catgcgcccg gacactgcgt caaaccaggg atgcagccga
      481 tccaggtcac cgggactcgc gctgtcgatc cgcagcacgt cgtcctgctc tgcacacgca
      541 agtgtcatcc gattgtggcg atgaccgcgg cgatggcgtc ggtttcgtca tggtagatcg
      601 ggattagctg gtcgatgcct gtcgtggtaa tgacttcctc cacctgtggt tgcggcatca
      661 gaagcacgat cttgccgcgt ttgctgatga tggacctggc gctgaccacg atgccccgca
      721 agcccaacga tgccatgaat tcaaccgccg aaaggtctac caccacggcg cggcgcgaac
      781 cggcgacgac ggccatcggc atctcgattt ctcgcgcacc ggcgatgtcg atacggccgg
      841 tgatgacaac cttggtgacg ctgccatcca ggtccaaaac ggaaatcggc atgacgattg
      901 tctgaccatt cggtgaacgt ggcatgattg ccagtgctgt cacggagttg caagattccg
      961 aaccggccat ttggctgaaa ttccacgcag gtttcgtgac ggttttatga cgctttgagc
     1021 cgaggctcgg acaccctgaa tggcccggac cggatccggt gcaggcggcc gttcgcgctg
     1081 aacgaccgga gctcgctgat tcggtctcag cagtaacgtt ctgttaagct ggtcccgtcc
     1141 gcttcatttt tttgtgatca attctacaat tgacgatgga taagtgcaat tttgacactg
     1201 gatcctggcc gatttgtgcc aatctgacac aagccagtta caggacctgg gcatttctgg
     1261 gctattgcac ggctctgcat ggcgggaatg ctctgtgctg atgggtgtga cgctttcgtt
     1321 gggcgcatca cgcggcatat gaaggtagcg gcaacggcgg aggacttctt gtcagtcacg
     1381 tcacgatcat tgcgtatcgc cgactcggtt gccgatatgg cgggtttgct gcgacgccca
     1441 ttgcgtatcg aggatttgat tgcccgcgcg caacgcgagt caggtcattg ggacttcggc
     1501 gacaccggtt gggttgagcc attgcgtcgc ctgctcaccg cttgctctgc ctcggaggcg
     1561 gatctgagcc tgattggaca gctcgccacg cggtgggatg tggttcgatt tctttcgaat
     1621 ctgttacggt tccatgccga ggagacgaaa cagccggaaa tttctacgca gaagatcgaa
     1681 cggccaattt tcattactgg cctgccgcgc agcggcacca cgttcctgca tcgcctgatg
     1741 atgacggatc ccgacaatcg ggcgcctctc gtgtgggaaa cgatttttcc ctggccgaac
     1801 gcgacgggac cggaccggcg ggtggctcgg gtggccaggc aactgagcat gttcgagtgg
     1861 ctcgcaccgg aattccgcgc actgcacccg ctggacgcga cctcgccaca ggaatgcagc
     1921 gaaataaccg cacacgtgtt tcgcagcctc cggttcgata ccaactacca tgttccggcc
     1981 taccggcgct ggctcgacgc ggatgtgcgg cggcatctgc cagcctacca gttccatcgc
     2041 cggtttttga gccatctgca ataccaggat cggaccaggc ggcgctgggt gttgaaatgc
     2101 cccgagcatg tgtttgcgct gcgtgcgatc cgcaccgtct atcccgatgc gagattgatt
     2161 ttcgtgcatc gcgacccggt caaggttctg ctgtcggtcg cccatctgac cgaagtgctg
     2221 cgccgcccct tcgcccgctc gctggatccg aaacagattg gccgcgatga aagcgaacgc
     2281 tggctggccg gcgcgcggcg catgatggac atcggagacg acgccggcct gccggaatcg
     2341 gtctgccatg tgcatcacat ggatctgatc agcgatcccg tcgccactgt ggagagcgta
     2401 tatcatcact tcggcatgag cctgccggag gcggccgccg gcgcgatcga ccgctatgtc
     2461 gccgagcggc ccaacggcgg ctatggtccc cgcaactatg cgttcgagga tcatggcctg
     2521 gatgaggcgg tcgaaaggga acaattccgg ccctacatgc tccgcttcgg gatcgcagcc
     2581 gaggttgcct ccgatcagtt tcgccagggc ctcgtgacat cagcgaaaac ctcggcgtct
     2641 acgacgcagg cctgacgatc attgcggctt gctgcggcgg gcgagctgga aaaggggcgc
     2701 gtggtctggc tgtgtcgtga cgactgccac cggcatgatc ggctgctcgt cacgtagcgt
     2761 gacacggaac cgctgcacca acgctgcaag caccagaacc gcctcggcca tggcgaactg
     2821 cgcaccgacg caaatgcgcg gtccggcacc aaatggcatg aatgcaaatc gcggtggcgg
     2881 cggcgcttcc ggcatgaagc gggtcgggtc gaatgcgctg ggatcggtcc agaatgcgtg
     2941 atggcgatgc agcacccagg gggcgatcat caccacggtg cgacgcggca gctgcaacgt
     3001 gccgatccgg tccggcagga tcgtttcgcg gaccagagtg aacgccgccg ggaacaaccg
     3061 taaggtttcg ttcacgacgg cacgggtccg gaccagcctg gtctgcactc cgtcctcggt
     3121 cagatcgacg tcgaacagtt cctccgccat ccagtcttgc acctctccgg cattggcgag
     3181 catcaggcag gcccaaaaca gcgtaactgc agtcgttt
//
LOCUS       DATAVD010001721         2478 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2025362, whole genome shotgun sequence.
ACCESSION   DATAVD010001721 DATAVD010000000
VERSION     DATAVD010001721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2478
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2025362"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            79..321
                     /locus_tag="VHX39_32990"
     CDS             79..321
                     /locus_tag="VHX39_32990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996013.1"
                     /translation="MRAPISVRLDPDVRATLEAEAKAQGIGLASYLRQLAAKAARDVR
                     RARIRADSAAVARHVATDPDAREFMADWGTPDAEGR"
     gene            322..678
                     /locus_tag="VHX39_32995"
     CDS             322..678
                     /locus_tag="VHX39_32995"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEX3996014.1"
                     /translation="MARHRAGEIVIVDWRGGALPKEPNRLRPAIVVEDDALFDPEYPN
                     VMVVPLTNDVRLAIPGLSVTIDPTPENGCRQPCFALAPSVTSVSAKRVSGTESRVLQE
                     QLDAIRRRIAEAIGLG"
     gene            complement(827..1213)
                     /gene="gloA"
                     /locus_tag="VHX39_33000"
     CDS             complement(827..1213)
                     /gene="gloA"
                     /locus_tag="VHX39_33000"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014106495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004462 - lactoylglutathione lyase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0051596 - methylglyoxal catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HEX3996015.1"
                     /translation="MGRYLHTMLRVGDLQRSIDFYSKAFGMNEIRRRDVPDGKYTLAF
                     VGYGDEEANTVIELTYNYGVEKYEIGGAFGHLAVGVPDVAAACEVAKAAGGTVTRPAG
                     PVKFGTTVIAFVKDPDGYSIELIERA"
     gene            complement(1218..2087)
                     /gene="lpxI"
                     /locus_tag="VHX39_33005"
     CDS             complement(1218..2087)
                     /gene="lpxI"
                     /locus_tag="VHX39_33005"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040070.1"
                     /note="LpxI, functionally equivalent to LpxH, replaces it
                     in LPS biosynthesis in a minority of bacteria; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase LpxI"
                     /protein_id="HEX3996016.1"
                     /translation="MNESATSPRALGVLAGGGPLPGRVAAAASAAGRPVFIVGLEGFA
                     DRHVIARWPHVFHRMGAAGGILGALRKHGCQDLVLIGPVRRPSLRDLRPDAEGARMLA
                     RIGLAAFAGDDGLLSAVIRVLGEEGFSVLGAHEILHEALGPSGLLSVAAPDANAMADI
                     TRGIAVTRALGLVDVGQSCVVSAGVVIAVEAVEGTDAMLSRCGALLEALEMTKPTGVL
                     VKSVKPGQDRRADLPTIGPETIRRAADAGLAGIAYDANGTILAEQEACIARANERGLF
                     LLGYEPTTTDKGS"
BASE COUNT          464 a          814 c          769 g          431 t
ORIGIN      
        1 gagtcgactc aactgacgac ttgagtgtac tacacgacta tcctacataa taaacccgtc
       61 attcgggaag gttcgaaaat gcgcgcgccc atttccgtac ggctggaccc cgatgtccgg
      121 gcgaccctgg aagccgaggc caaggcgcag gggatcggcc tcgcgagcta tttacgccaa
      181 ctcgcggcca aggcggcccg tgacgttcgt cgggcgcgca tccgagccga cagcgcggca
      241 gtggcgcggc atgtcgcgac agacccggac gcccgtgagt tcatggccga ttggggaacg
      301 cctgatgccg agggtcggta ggtggcgcgc catcgagccg gcgagattgt cattgtcgac
      361 tggcgcggtg gcgccttgcc gaaggagccg aaccggctgc gcccggcgat cgttgttgaa
      421 gatgatgcgc tgttcgatcc ggaatacccg aatgtcatgg tggtgccgtt gaccaatgac
      481 gtgcgcctgg cgatcccagg cctgtccgta acgattgatc cgacgccgga gaacggttgc
      541 cggcaaccat gcttcgccct cgccccatcg gtcacttcgg tatcggccaa acgtgtcagt
      601 ggcacggaat cacgggtgct tcaggagcaa ttggatgcca tccggcggcg gatcgcggaa
      661 gccattggct tgggctgacg gtacgtcgcc ttaccgccaa ccgggtaatt ccggttcgcc
      721 ccgcccggtt aggtcgcgga tggatcggcc ctcgctttgg ctccacgagg aggcacgacc
      781 agccggcatg gcgacccacg tgccgactga gccgcaaggg atcgtttcag gcccgctcaa
      841 tcagttcgat cgagtaaccg tccggatcct tcacgaacgc aatgaccgtg gtgccgaact
      901 tcaccggacc ggccggcctt gtgaccgtgc cgccggctgc tttcgccacc tcgcatgcag
      961 ccgcgacatc gggcacgccg accgccaggt ggccaaaggc accgccgatt tcgtatttct
     1021 cgacgccgta gttgtaggtc agttcgatga ccgtgttggc ctcttcgtca ccatagccga
     1081 cgaacgccaa cgtgtatttg ccgtccggca catcccgcct gcggatttcg ttcatcccga
     1141 acgccttgga ataaaaatcg atgctgcgtt gcagatcgcc cacacgcagc atggtgtgca
     1201 gataacggcc catggtctta gctcccctta tcagtggttg ttggctcgta gccaagcaag
     1261 aatagcccac gttcgttcgc tcgcgcgata caggcctcct gctcggccag gatcgttccg
     1321 ttggcatcat acgcgatgcc cgccagtcct gcatccgccg ctcggcggat cgtctccggc
     1381 ccgatggtcg gcaaatcggc gcggcggtcc tggcccggtt tgaccgactt gaccaaaaca
     1441 ccggtgggct tcgtcatctc caatgcctcg agcaacgcac cacagcggga gagcatggca
     1501 tcggtcccct ccaccgcttc aaccgcaatc accacgccgg ccgagacgac gcagctctgg
     1561 ccgacgtcga ccagccccag tgcgcgggtg acagcgatgc cgcgggtaat gtcggccatg
     1621 gcattggcat cgggggcggc gaccgacagc agaccgcttg gtcccagcgc ctcatgcaat
     1681 atttcgtgag ccccaagcac actgaagccc tcctcgccca atacgcgaat gacggccgaa
     1741 agcagcccat cgtcaccggc gaatgcggcg agaccgatac gggcgagcat cctggcgccc
     1801 tcggcatccg gtctgaggtc ccgcagcgat ggccgccgca ccggaccgat caacaccagg
     1861 tcctgacagc catgtttccg caacgcgcct aagatgcctc ccgctgcccc catacggtgg
     1921 aacacgtgcg gccagcgggc aatgacgtga cgatcggcaa agccttccag accgacgatg
     1981 aagaccggcc gtccggctgc ggaggcggca gcggcgacac ggcccggcaa agggccgccg
     2041 ccggccagga cgcccaaagc gcgcggtgag gttgcagatt cgttcattgc tgctcgcgca
     2101 tagacgggaa tgcggcgatc ggacagacct cccattcggc tcggcgtctg gccatcagca
     2161 ggattgcaga taacagaacc gcagcgcgcg atttctcacc gagccaggag gcctggccgg
     2221 cgtatgcaac tgatctggga accccgccgt tgagtctgat cccaaggtac tgggccggtt
     2281 gaaccacggt ttgcgacccg gtgccgatca ctcagaaagc agccggcagg cggcgccgac
     2341 gcatggagat gccaaatggc cgaactgatc ctcaccacct tcgattgggt tcccgagcca
     2401 ccacggggct ttgtgcggga cattcgcgtg cgttgggcac tcgaagaagc ggggttgcct
     2461 taccgcgtcg caagcgtg
//
LOCUS       DATAVD010001722         2445 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_535841, whole genome shotgun sequence.
ACCESSION   DATAVD010001722 DATAVD010000000
VERSION     DATAVD010001722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2445
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_535841"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..189
                     /locus_tag="VHX39_33010"
     CDS             <1..189
                     /locus_tag="VHX39_33010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996017.1"
                     /translation="RCLDNVPIARPDKIQSTTGRQVFDGRCFCPNLTLPLHRASSQEY
                     ILGSANYRIGRQAKNLMA"
     gene            761..1384
                     /locus_tag="VHX39_33015"
     CDS             761..1384
                     /locus_tag="VHX39_33015"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX3996018.1"
                     /translation="MRVAMPDQGQLPEFMHGDVVAAWQAAGRTFKSLGARIEPVRLPD
                     WYFELARPTGTIMASEAFSVHRDRIEDMSQAIGPVVRGRTLAAKSFAPGSYAEEIRRM
                     GERRRLFAEWFGVYDAILTPKVGVPAIPLSEVDEDSSIPNYLTRPANYLNLCSLAMPS
                     GLSTGLPLGVQIIGKPYAEGTVLRLGKAFQDATEFHRKAPDLAALGL"
     gene            complement(1488..2021)
                     /locus_tag="VHX39_33020"
     CDS             complement(1488..2021)
                     /locus_tag="VHX39_33020"
                     /inference="COORDINATES: protein motif:HMM:NF014471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEX3996019.1"
                     /translation="MNGALALIVLAFHLALLSSISFGGFPTVLPDVRAFVVAGHGWMT
                     DEEFANFFALAQAIPGPNMILMMGFVGWKVWGIPGAIVSSFATFAPPCGMYFVAYRLW
                     DRVRTAPWQRIVRNGLIPVTVGLVIASGTVMARVADSGWVSVSVTIGAVVLMISVRVN
                     PLWILFVGGALGGLGFH"
     gene            complement(2018..>2445)
                     /locus_tag="VHX39_33025"
     CDS             complement(2018..>2445)
                     /locus_tag="VHX39_33025"
                     /inference="COORDINATES: protein motif:HMM:NF014471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEX3996020.1"
                     /translation="TEEEFADIVSLCQFMPGPNVVGIAVCVGAKLRGSGGAIAAVMGF
                     LLIPWTIGFAAGVLFLQYAHLALIRNILGGVSAAAAGLLIATGLRMLRPHRKRPEALV
                     ITALAFGGIVFTSLPFLMVLCGLAALSIAIAGIESTRTR"
BASE COUNT          513 a          785 c          739 g          408 t
ORIGIN      
        1 cgttgcctgg ataatgtccc gatcgcccgg cctgacaaaa tacagagcac caccggacgt
       61 caggttttcg atggccgttg cttttgccct aatcttaccc ttccactcca ccgcgccagt
      121 tcacaggaat atattttagg atcagcaaat taccgaattg gccgtcaggc caaaaacctg
      181 atggcctgag gaaaacgccg aattcgtccc aggataaagc gcgtgttgat cgtatccgat
      241 gcccggggct gatcggccga ttcccgggcg cgcttcgtcc cgcgagatcg tcgatacact
      301 gcttcagcga atcgaggagc tgacgccagg ctgcatgcgt tgaccgagac ctactccaag
      361 gaagccagtg cgctggccga cgcgtgtgac accgcgcggg cctcggcttt ccgcttgggc
      421 cgctgcacgg tttgccgatc gcctacaagg atttatgcgt tatcgccggg cgcatcggca
      481 ccgggggctc ccggatgctg gcgaaccggg tggcaaccga aacctcgaac accgttgagc
      541 gtctgaccgc ggccggaatg gtgccactcg ggaagcttca catggtcgag ttcgcattcg
      601 gcggttgggg caccaacccg ctgatgagtg ccccctggaa tccatgggac cttgatattc
      661 agcgtgtccc cggcggatcg tcgagcggcg caggggtcgc ggtggccgcg cgtctgacac
      721 ccgccggctc ggcagcgaca cgggcggctc gattggcgac ctgcgtgtcg ccatgcccga
      781 ccaaggccag cttcctgaat tcatgcacgg tgacgtggtc gctgcctggc aggcggcggg
      841 caggaccttc aagagtttgg gcgcgcggat cgagccggtg cgcctgcccg actggtactt
      901 cgagctggcg cggcccaccg gcaccatcat ggcgtccgag gcgttctcgg ttcaccgcga
      961 ccgtatcgaa gacatgtccc aggcgatcgg acccgtggtg cgcggccgca cgctggcggc
     1021 caagagcttt gctcccggca gctatgccga ggagattcgc cggatgggcg agcgccgccg
     1081 cctcttcgcc gaatggttcg gcgtttacga tgcgatcctg acgccgaagg tcggcgtacc
     1141 ggcaatcccc ctgtcggaag tcgatgagga ctcatcgatt ccaaactacc tcacgcgccc
     1201 agcgaactat ctcaacctgt gcagtctggc gatgccatcc ggcttgtcca ccggcctgcc
     1261 actcggcgta cagatcatcg gcaaacccta cgccgagggc accgtcctgc gactgggcaa
     1321 agcctttcag gatgccaccg aattccatcg caaggcgccg gacctggcag cgctcggcct
     1381 ctgactggcc gctgaaagag tcgggcggcg ccgcaaggag tcgcgatcct cagtccgcat
     1441 ctgataggaa tgacgggatg ctggtttgag gcgatcaatc cggaccatca atgaaatccg
     1501 agaccgccca aagcaccacc gacgaataga atccaaagcg ggttcactcg taccgagatc
     1561 atcagcacca ccgcgccaat cgtaacggag accgacaccc acccggagtc ggccacgcgc
     1621 gccatcaccg tgccgctcgc gatgacaaga ccgaccgtca cgggaatcaa gccattccgt
     1681 acaatccttt gccagggcgc ggtgcgaacc cgatcccaca accggtaggc gacgaagtac
     1741 atgccacaag gcggcgcgaa tgtggcaaag gagctgacga tggctccggg aattccccac
     1801 accttccatc cgacaaatcc catcatcaag atcatgttcg gtcccggaat ggcctgcgca
     1861 agcgcgaaga agttggcgaa ctcctcgtct gtcatccagc cgtgaccggc gaccacgaat
     1921 gctcggacat ccggcagtac agtggggaag ccgccgaagc tgatcgacga caagagggcg
     1981 agatggaacg ccagcacgat aagtgccaaa gcgccgttca tcgggtccgc gtgctttcaa
     2041 taccagcaat ggcgatgctg agcgcggcga gaccgcacag aaccatcaga aacggcaggc
     2101 tggtaaacac gatgccgcca aaggccagag cggtgatcac caacgcttcc ggacgcttcc
     2161 gatgtggccg cagcatgcgg agaccggtcg cgatcaatag tcctgccgcg gcggcggaga
     2221 ctccgccaag aatgtttcgg ataagggcga gatgagcgta ctggagaaac aacacaccgg
     2281 ctgcgaaacc aatcgtccag ggtatcaaca ggaaacccat tacagcggca atggccccgc
     2341 cagaaccgcg cagcttcgct ccaacgcaga ccgcgatgcc cacgacgttc ggcccgggca
     2401 tgaactggca gaggctgacg atgtcggcga attcctcctc ggtgg
//
LOCUS       DATAVD010001723         2413 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_723065, whole genome shotgun sequence.
ACCESSION   DATAVD010001723 DATAVD010000000
VERSION     DATAVD010001723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2413
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_723065"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..666
                     /locus_tag="VHX39_33030"
     CDS             <1..666
                     /locus_tag="VHX39_33030"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF268 domain-containing protein"
                     /protein_id="HEX3996021.1"
                     /translation="WRRYSQLPGAETLRWIDSMPQLHDRTSTSPFDAHYFYLNGWAMR
                     RIVALAPPSHVDIGSAVTFSCLLGAVLPVCFVDYRPLPARCAGMESVAGNITSLPFAS
                     GSVRSLSCLHVAEHIGLGRYGDPLDPEGTRKAARELTRVLAPGGSLFFGLPVGIPRTC
                     FNAHRIHAARVIREYFGDLELVEFAGVHDDCSFVERVTLSEFNDDAYGCGMFWFRKPE
                     APR"
     gene            663..1967
                     /locus_tag="VHX39_33035"
     CDS             663..1967
                     /locus_tag="VHX39_33035"
                     /inference="COORDINATES: protein motif:HMM:NF014051.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEX3996022.1"
                     /translation="MKLSRVAPEAALVGAGQVAAALASIATIRVLTGILRPEAFGELA
                     LAFTVAALAQQFVFGPAAMACVRHYAPSYESGNLGAFRRSMVILCGAGTLALAAIAAA
                     VWFGLRLEGLPVWIPSLWAATVFAWLNSISSLLDGVQNAARQRKIVALHQGVGGWLRL
                     GFAVIAAKSWGGTSNRILWGYSAGYVLLIASQAFFLLSTLAAAKSSEKSGPAKPLMLS
                     MCRYAWPFSAWGVFTWVQASADRWALGAYAGLYQTGLYQSIYQLGYYPASLIMQFLLQ
                     VATPILFDKAGHRGETARQQAAKQWNNWLVLAVLAATLVGVALSWAGGHRLLALLIAP
                     AYRSQSSLVTWLILASGCFAAGQVGTLNPMMSMNTERLLAPKIVTAIAGAILIVGGAR
                     LAGTAGVVAAQVCFSVGYLIWILCLNRKAPAVCAAPIPAYHG"
     gene            1971..>2413
                     /locus_tag="VHX39_33040"
     CDS             1971..>2413
                     /locus_tag="VHX39_33040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996023.1"
                     /translation="MRILQLIEFSGNSALAANQVWKRNLYEPLLDLGCDVSLLSTNAA
                     RKAWRSGDQRALADFNDSVLQHFRREHARAPFDLFFAYVVDGMLDPAVIAEIRRAGVV
                     AVNFSCNNCHQFHLVREISKHFDYSLHSEGDTARYFTEAGAQPLW"
BASE COUNT          394 a          739 c          753 g          527 t
ORIGIN      
        1 tggcgccgtt atagccagct acccggcgcg gaaacgctgc gttggatcga ctccatgccg
       61 cagctgcacg accgtacctc gacgtcgccg tttgatgcgc actacttcta tctgaacggc
      121 tgggcaatgc ggcgtatcgt agcgctggcg cctccctcgc atgtggacat tggctccgcg
      181 gttacgtttt cctgtctgct gggggccgtg ctgccggtgt gttttgtcga ctaccggccg
      241 ctgccggctc gctgcgcggg catggaatcg gtggcgggaa acattacctc cctacccttc
      301 gcctcgggct cggtacgatc gctctcgtgc ctgcatgtag ccgagcacat tggcctcggg
      361 cgctacggcg accccctcga tcccgagggc acacgcaaag cggcgcgcga attaacccgc
      421 gtcctggcgc cgggcggttc cctctttttc ggtttgccgg tgggcattcc gcgcacctgc
      481 ttcaacgcgc accgcatcca cgcggcgcgg gtaatccggg aatattttgg cgatctggag
      541 ctggtggaat ttgccggtgt tcacgacgac tgcagctttg tcgaacgcgt gacgctttcc
      601 gagttcaacg acgacgctta cggctgcggc atgttctggt tccgtaaacc ggaggcgcct
      661 cgatgaagct ctcgcgcgtg gcgcctgagg ccgcgttggt cggggcggga caggtggcgg
      721 ctgccctggc aagcatcgcg accattcgcg ttttgacggg catactacgc cccgaagctt
      781 tcggcgaact ggcattggca tttacggtgg cggcgctggc gcaacaattc gtcttcggtc
      841 cggcagcgat ggcgtgcgtg cgacactatg cgccctcata tgaaagcggg aatctgggag
      901 cattcagacg cagcatggtt attctgtgcg gcgcgggaac cttggcgctg gctgcaatcg
      961 ccgcggcggt atggttcggc ctgcgcctgg agggactccc cgtatggatt cccagcctgt
     1021 gggcggccac tgtcttcgcc tggctgaact cgatcagctc attgctggac ggagtgcaaa
     1081 acgccgcgcg gcagcgcaaa atcgtggcgc tccatcaagg cgtgggcggc tggctgcggt
     1141 tggggttcgc ggtgatcgcg gcaaaatcat ggggcggcac aagcaatcga atcctgtggg
     1201 gttattcagc gggatatgtg ctcttaatcg cttcgcaagc attcttcctc cttagcacgc
     1261 tggccgccgc gaaatcttct gagaagtcgg ggccggcaaa accactaatg ttatcgatgt
     1321 gtcgttatgc ctggccgttc tcggcgtggg gtgtcttcac ctgggttcag gcttcggctg
     1381 accgctgggc cttaggcgcc tacgctggtc tctatcagac agggttgtac caatccattt
     1441 accagcttgg gtattatccg gcatcgctaa tcatgcaatt ccttctgcaa gtcgcaacgc
     1501 ctatcctgtt tgacaaggcg gggcatcgtg gcgaaactgc gcgacagcag gccgccaaac
     1561 agtggaataa ctggctggtg ctggcggtgc tggcggcgac gctcgttggg gtggcgctct
     1621 catgggccgg cggtcaccgg ctgctggcgc tcttgatcgc ccccgcgtac cggagtcagt
     1681 cgtcattggt tacctggctg attcttgcca gcggctgctt tgcggcggga caggtcggca
     1741 cgctgaatcc gatgatgtcc atgaacaccg agcgcctgct cgcccccaag atcgttacgg
     1801 ctatcgccgg cgccatcctg atcgtcggcg gcgcacgcct ggccggcacg gccggagtgg
     1861 tggctgcgca ggtgtgcttc tcggtcggct acctgatttg gattctttgc ctcaaccgga
     1921 aagcgccggc tgtttgcgcc gcacccatac cggcatatca cggataaaac atgcgcatcc
     1981 tgcaactcat cgaattttcg ggcaattccg ccctcgcggc caaccaggta tggaagcgca
     2041 acctctacga accgctgctg gatttaggct gcgacgtctc gctactctcc accaatgccg
     2101 cccgcaaagc ctggagaagc ggcgaccagc gcgcgctggc agatttcaat gacagcgtgc
     2161 tgcaacattt ccgccgcgag catgcgcgcg ccccgttcga cctgtttttc gcctacgtgg
     2221 tggatggcat gttagatccc gcggtgatcg ctgagatccg tcgcgccggc gtagtcgcgg
     2281 taaacttttc gtgcaacaac tgccaccagt ttcatctggt ccgcgagata tctaagcatt
     2341 tcgactacag ccttcactcc gagggagaca cagcccgcta tttcacggaa gccggggccc
     2401 agcccttgtg gtg
//
LOCUS       DATAVD010001724         3233 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1652811, whole genome shotgun sequence.
ACCESSION   DATAVD010001724 DATAVD010000000
VERSION     DATAVD010001724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3233
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1652811"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(122..1057)
                     /locus_tag="VHX39_33045"
     CDS             complement(122..1057)
                     /locus_tag="VHX39_33045"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3996024.1"
                     /translation="MKVGFIGVGMMGAGMASNMQKGGNELVVNDLTRQAASRHLNAGA
                     TWADSPKAVAAACDVIFTSLPTPADVQKVGTGENGLMEGIRPGSVWFDLSTNAVDVVR
                     SLHAQFAEKGVHFLDAPVSGGPSGANSGKLAIWVGGDKAIFDQYKAQLDAMGDQALYI
                     GPIGAGTIAKLVHNAAGAAVNVVLSEVFTMGVKAGVEPLQLFAAIRQGAGGRARLFDR
                     MQKQFLTGVYDPPDFALRLLHKDVSLACQLGREVSVPMRLTNLAHQELTEAMNRGWEK
                     RDSRIGALLQQERAGIPPIAVDPARIKAVMDADDK"
     gene            complement(1082..1660)
                     /locus_tag="VHX39_33050"
     CDS             complement(1082..1660)
                     /locus_tag="VHX39_33050"
                     /inference="COORDINATES: protein motif:HMM:TIGR02118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EthD family reductase"
                     /protein_id="HEX3996025.1"
                     /translation="MIAAISLMRRQDTIDLSRFRRHWLDVHGPLVCAFPGVVRYVQCH
                     VIDSLAANEVGLSMRIDGFPILYFDNDADRLRAHESPEMAACNIDSRQFVGAVSRAIT
                     DVSGQLRFGHGRFSLIEIWPSSVMPSPRPVQYIVREQGAAPSSTIPHLPVTVGTMTQT
                     WYDSLVDLECAAAATAENTQAARFVVEEHWLV"
     gene            complement(1663..2076)
                     /locus_tag="VHX39_33055"
     CDS             complement(1663..2076)
                     /locus_tag="VHX39_33055"
                     /inference="COORDINATES: protein motif:HMM:NF018748.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1348 family protein"
                     /protein_id="HEX3996026.1"
                     /translation="MDNDDFVLTWTEASELVRGVEDAFNAADLTAIASGFTEDATCRF
                     ADFPEMHGRPEIMQFLTARFARTQGYRLTKRLQVLTGNRLANTWDASWTDAKTGKSML
                     GRGTEIWILRGRRIAVWDATFNVWEKGGPPATPVI"
     gene            complement(2097..2516)
                     /locus_tag="VHX39_33060"
     CDS             complement(2097..2516)
                     /locus_tag="VHX39_33060"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEX3996027.1"
                     /translation="MIDWIIWVAAGLGLLILEMLLPGVFMMWLGLAACGAGLLTLAFE
                     FGFSGQVVSFGILAAITLSIGLRVRHPATIMRTERAGLIGRPATALVFQGRDGRVRLG
                     DTDWPARVPPEIAPPDPGARLRVAQVDGTILIVRPDL"
     gene            complement(2513..>3233)
                     /locus_tag="VHX39_33065"
     CDS             complement(2513..>3233)
                     /locus_tag="VHX39_33065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HEX3996028.1"
                     /translation="EIPEQTVITKDNATVSVDGIIYYRVMEPEKAAYQVTFLTVALTT
                     LATTNIRAVIGEMELDSTLSSRERINSSLLTILDAATEPWGVKVNRVEIRKIEPPENL
                     IRAMNLQMTAERERRAVVARADGEREAEIKRAEGEKQSLILRAEGRQLAAVRDAEARI
                     ALAEAEARATQLLSETASKFGNSGLQYYIADRYIRAFQALAASPSSRLVVVPMESAGL
                     AGGIVQAMQLLRDGDKSGATP"
BASE COUNT          633 a         1081 c          925 g          594 t
ORIGIN      
        1 ccgggtcaag cccggtgatg acggcctacc gcccggtgat gacggcctac gcgacgcaaa
       61 ctgtcgatac cgcaatgccc ggccggaaat aacggcacac cggccaggca acgtcagaaa
      121 attacttatc gtcagcgtcc atcaccgctt tgatccgagc gggatcgacc gcgatcggcg
      181 ggatgcctgc cctctcctgc tgtaacaacg cgccaatgcg ggagtcgcgc ttttcccagc
      241 cgcgattcat cgcctcggtc agttcctgat gcgcgaggtt ggtcagccgc atcggcacgc
      301 tgacctcacg tcccaattgg cacgccagcg agacatcctt gtgcagcagc cgcaatgcaa
      361 aatccggcgg gtcgtaaacg ccggtcagga actgcttttg catccggtcg aacagccgcg
      421 cccgcccgcc ggcgccctga cggatcgctg cgaacaactg cagcggctcg acaccggcct
      481 tcacgcccat cgtgaacact tcggacagta ccacattgac cgccgcgccg gccgcattat
      541 gcaccagctt ggcgatcgtt ccggcaccga taggaccgat atataacgcc tgatcgccca
      601 tcgcatcgag ctgcgccttg tattgatcga agatcgcctt gtcgccgccg acccagatcg
      661 cgagtttgcc gctgttcgct ccggacggcc cgccgctgac tggcgcatcc aggaaatgca
      721 cgcctttctc agcgaattgc gcgtgcagcg agcgcacaac atcgaccgcg ttggttgaca
      781 gatcgaacca gaccgagccg ggacgaatac cctccatcaa cccattctcg ccggtgccga
      841 ccttctgcac atcggccggt gtcggcaatg aggtaaagat cacatcgcaa gcggccgcca
      901 ccgctttcgg cgaatcagcc caggtggcac cggcgttgag gtggcgggag gcagcctggc
      961 gggtgaggtc gttcaccacc agttcgttgc cgcccttttg catattggat gccatgccgg
     1021 cgcccatcat gccgaccccg ataaagccaa ctttcatttc tggtttcctc cttgatggtg
     1081 gtcagaccaa ccaatgttcc tcgacgacaa agcgtgccgc ctgggtgttt tccgccgtcg
     1141 ctgccgcagc acattccaga tcgacgaggc tgtcgtacca ggtttgcgtc atggtcccga
     1201 cggtaaccgg caaatgcgga atggtgctgc tcggcgcggc accttgctcg cgcacgatgt
     1261 actgcacggg ccggggcgat ggcatgaccg aagacggcca gatctcgatc agactgaacc
     1321 gtccgtggcc aaagcgaagc tggcccgaca cgtcggtgat ggcccgcgac accgcgccaa
     1381 cgaactgacg ggagtcgata ttgcacgccg ccatctcggg tgactcgtgg gcacgcaacc
     1441 gatccgcatc gttatcgaaa tacagaatcg ggaacccatc gatccgcatc gacaatccga
     1501 cctcattcgc cgccagtgaa tcgataacgt gacattgcac gtagcggaca accccgggga
     1561 acgcgcacac caaaggaccg tgcacatcca gccaatggcg gcgaaagcgc gacagatcga
     1621 tggtatcctg gcgccgcatc aggctaatgg cggcaatcat acttaaataa ccggcgtggc
     1681 gggcggcccg cctttttccc acacgttgaa tgtcgcgtcc cagactgcga tgcggcggcc
     1741 gcgcaggatc cagatctcgg tgccgcgccc caacatcgat ttgccggtct tggcatcggt
     1801 ccacgacgca tcccaggtat tggccagccg gttgccggtc agcacctgca acctcttggt
     1861 cagcctgtag ccttgcgtgc gggcaaatcg agccgtcagg aactgcatga tctcgggccg
     1921 gccgtgcatt tccgggaagt cggcaaaccg gcaggtcgcg tcctcggtaa agccactggc
     1981 gatcgctgtc agatcggcgg cattgaacgc atcctccacc ccccggacca gttcgctggc
     2041 ttcggtccag gtcagcacga aatcgtcgtt gtccacgtcg atcctttcag atgcgattat
     2101 aaatccggcc gcacgatcag gatcgtacca tccacctgcg ccacccgcaa acgcgcgccc
     2161 gggtccggcg gcgcgatttc gggcggaacc cgggccggcc agtcggtatc gccaagccgc
     2221 actctgccat cgcggccctg aaacaccaat gccgttgccg gccggccgat caggcccgcg
     2281 cgttcggtac gcatgatcgt ggcggggtgg cgcacccgca atccgatgct cagggtaatc
     2341 gccgccagga taccaaacga aaccacctga ccggagaagc cgaattcaaa tgccaatgtc
     2401 agcaatccgg cgccgcacgc ggccaggccc agccacatca tgaacacgcc ggggaggagc
     2461 atttcgagga tcagcaggcc cagcccggca gcaacccaaa tgatccaatc gatcacggtg
     2521 ttgccccgga cttgtcgcca tcgcgcagca attgcatcgc ctgcacgatc cctccggcaa
     2581 ggccggcgga ttccatcggc accaccacca gccgcgaact gggcgaggca gccaatgcct
     2641 gaaacgcccg aatataccgg tcggcgatgt aatattgcag accggaattg ccaaattttg
     2701 atgcggtttc agacagcagt tgcgtcgccc ttgcctccgc ttctgccaat gcgatgcgcg
     2761 cctcggcatc gcgcaccgcc gcgagctggc gaccctcggc gcgcaggatc aggctttgct
     2821 tctcgccctc ggcccgtttg atttccgcct cgcgttcgcc atcggcacgg gcaacaaccg
     2881 cgcggcgttc gcgttcggcg gtcatttgca ggttcatcgc acggatcaga ttttccggtg
     2941 gctcaatctt ccggatctcc acccggttga ccttgacgcc ccatggctcc gttgccgcgt
     3001 ccagaatcgt cagcaacgac gagttgatgc gttcgcgcga cgacaatgtt gaatcgagct
     3061 ccatctcgcc gatcaccgcg cggatattgg tggtggccag cgtggtcagc gcgaccgtca
     3121 gaaaggtcac ctgatacgcg gctttttccg gctccatcac ccggtaatag atgatgccgt
     3181 cgaccgaaac ggtggcattg tcctttgtta taacggtttg ttccggaatc tcg
//
LOCUS       DATAVD010001725         1640 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_911340, whole genome shotgun sequence.
ACCESSION   DATAVD010001725 DATAVD010000000
VERSION     DATAVD010001725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1640
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_911340"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..364
                     /locus_tag="VHX39_33070"
     CDS             <1..364
                     /locus_tag="VHX39_33070"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3996029.1"
                     /translation="KALSQFQAVQQNLAVLATHAAVAGMAAVMAQNAVATGHLFPDIA
                     IAKARAGESAGLGAAIAHQIHGAIGFTLDHDLQFSTKRLWSWRDEFGNEAAWNLAYGR
                     HLASAGAELFWPAITAAS"
     gene            374..1522
                     /locus_tag="VHX39_33075"
     CDS             374..1522
                     /locus_tag="VHX39_33075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3996030.1"
                     /translation="MSIFDFPRAAPTEAMETLRAEVRAFLGVELAARRPAERALSWAG
                     YDANFSRKMGQKGWIAMTWPSRYGGHERSSLERYVVSEEMLAAGAPVSAHWIADRQSG
                     PLILRAGTEEQRQRYLPGIARGESFFCAGLSEPDTGSDLASALTFAAETKEGFIVNGT
                     KVWNTNGHRAHYMILFCRTAPPSVAVRHQGFSQFIVDMSLPGITVRPILDLAGEHHIN
                     EIHFSDVVLPKDALLGQRGDGWKQVMSELANERSGPERFLSSFVLLQMLARSLGSDPS
                     PHACAVLGRFAGQVALLRQMSMSIAVMLQNGETPNVQAAIVKDLGAVLEQEVAEAARL
                     LVTTEPDLQGDDFSAVLATTMLAAPSFSLRGGAREILRGIIARGLNLR"
BASE COUNT          333 a          473 c          500 g          334 t
ORIGIN      
        1 caaggcgctg tcgcagttcc aggcggtcca gcagaacctg gccgtgctcg caacccatgc
       61 cgcagttgcc ggcatggctg ccgtgatggc acagaatgcg gttgccaccg gtcatttgtt
      121 ccctgacatc gccatcgcca aggctcgcgc aggggaatcc gcgggcctcg gcgcggcgat
      181 cgctcaccaa attcacggtg cgatcggctt cacgctggat cacgacctgc agttttcgac
      241 caagcgcctg tggtcctggc gtgatgagtt cggcaacgaa gccgcctgga accttgccta
      301 tggccgacat cttgcgtcgg ctggagcgga gctcttttgg cccgcaatta ctgcagcgtc
      361 ctagggagcg gtcatgtcca tcttcgattt tccgagggcg gcgccaaccg aggcaatgga
      421 gacattgcgc gccgaagttc gggctttcct tggcgttgaa ctggccgcta gacgccctgc
      481 agagcgagcg ctcagctggg ctggctacga cgccaacttc agccgaaaaa tgggtcagaa
      541 gggttggatc gcgatgacct ggccgagccg ctacggagga catgaacgca gctcgcttga
      601 gcgctacgtg gtgtcggagg agatgctggc tgcaggcgcc cccgtatcgg cgcactggat
      661 tgcggatcgc caaagcgggc cgctaatttt gagagccgga actgaggaac agcgccagcg
      721 ctacttgcct ggtatcgcgc gcggcgagtc gtttttttgc gccgggctaa gtgaacccga
      781 taccggctcc gacctggcgt cggcgctcac gttcgccgcg gaaacaaagg aaggtttcat
      841 cgttaacggc acaaaagtct ggaacacaaa tggccatcgc gcgcattaca tgatcctttt
      901 ttgccggacc gcgccaccgt cagtcgccgt gagacatcag ggcttcagcc aattcatcgt
      961 cgacatgtcg ctgccgggaa tcaccgtacg cccaattctg gatctggcgg gcgagcatca
     1021 tatcaatgag atccatttca gtgatgtggt acttccaaaa gacgcactgc tggggcaacg
     1081 aggagacgga tggaaacagg tgatgtcgga gctcgccaac gaacgcagtg ggccggagcg
     1141 ctttctttca tcgttcgtac tcctacaaat gctcgcgcgg tccctgggat ctgatccctc
     1201 acctcatgca tgtgcggtcc tgggacgatt cgctgggcaa gtcgcgttgc ttcgacagat
     1261 gtctatgtcg atcgccgtaa tgctgcaaaa tggcgagacc cccaatgtac aagccgcgat
     1321 tgtgaaggat ctgggcgctg tgctggaaca ggaagttgcc gaagctgctc ggctgcttgt
     1381 gacgaccgag ccagaccttc agggcgacga tttcagcgcg gtgttggcaa caacgatgct
     1441 ggcggcacct tcgttctcgc tgcgtggtgg tgcacgagaa atcctgcgcg gaattatcgc
     1501 gcgtggcctc aacctgagat agaagaccat gagcgatccc attctcttcg aaaaagccga
     1561 cggaatagcg atcataacga tcaatttgcc ggaaacgaga aatccacttt ccagccctgc
     1621 cactgtggac gcgttggtga
//
LOCUS       DATAVD010001726         1969 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2396565, whole genome shotgun sequence.
ACCESSION   DATAVD010001726 DATAVD010000000
VERSION     DATAVD010001726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1969
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2396565"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..289)
                     /locus_tag="VHX39_33080"
     CDS             complement(<1..289)
                     /locus_tag="VHX39_33080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996031.1"
                     /translation="MTDVQAVVVDPSSNERLAIKPVPLAPAYRDEVTVRVRAISLNRG
                     EVNRAVRSAEPGWRPGWDFVGKVEETAPEGGGPAKGTRVVGMLPSGAWAEVI"
     gene            complement(361..1443)
                     /locus_tag="VHX39_33085"
     CDS             complement(361..1443)
                     /locus_tag="VHX39_33085"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX3996032.1"
                     /translation="MSITQMEDVRISHPEPLRAQRIAWIVLALVLVGLGLWTLQEFLG
                     ALAWAGVLAVAFWPSYQAIRQRWPFGQSKVLLPLLFTLGIGLVFVLPIVLAGMQAGHE
                     AHTLFAWIDSARRNGIPVPEVIGHLPIFANRTRDWWQQNLSDPDAASDFLTHLWTPQY
                     VFAGRQVGVAILHRVVMFGFCLLTLFFLFRNGDSLAVQLRHAGARAFGTGADRIGRQT
                     IASIHATVNGLVLVGLAEGLVLYIVYLVTDVPRPALLGAATAVGAIIPFGAPFFFCVA
                     AVLASTQGSMTDAIVIIVAGALTTFVADHFIRPVVIGSATRLPFIWVLFGIFGGVATW
                     GLLGLFLGPAIMSALILLWREWTETP"
     gene            1524..>1969
                     /locus_tag="VHX39_33090"
     CDS             1524..>1969
                     /locus_tag="VHX39_33090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HEX3996033.1"
                     /translation="MYVLNDLPPQIDPVLLAQLLHAEPATIGHFRHHGFMAPEIRLLL
                     PGYRKVAGTAVTVRSYAADTSIVHYALGKLRPGDFLVIDRSGDTRHAVCGGGVAFSAK
                     AAGCVGIIIDGPATDVQELREYDMPVWARGLSTVTGKPQFTFGEFCT"
BASE COUNT          433 a          636 c          597 g          303 t
ORIGIN      
        1 gaatcacttc cgcccaggca ccggagggca gcatgcctac gacgcgcgtg cctttggcgg
       61 gaccgccgcc ctcgggagcg gtctcctcca ccttgcctac gaagtcccaa cccggccgcc
      121 agccaggttc ggccgagcgc accgctcgat tgacttcgcc ccgatttaac gaaatcgcgc
      181 ggacgcggac cgtaacttca tcgcgatacg ccggggcaag cggtaccggc tttatcgcga
      241 ggcgttcgtt gctggacgga tcgacgacga cggcttgcac atcggtcatt ttggtttccc
      301 tctgggtcgg cgtcacagat caattgataa tatgcgtccg cggctgaaac ggaacacgcg
      361 tcagggggtt tcggtccatt cgcgccagag caggatcagt gccgacataa tcgccggccc
      421 cagaaacaac ccgagcaagc cccaggtcgc gacaccaccg aaaatgccaa acagcaccca
      481 gatgaacggt agacgggtcg cgctgccgat caccaccgga cggatgaaat ggtcggcgac
      541 gaaagttgtc agtgcgcctg ccacgatgat cacgatcgca tctgtcatcg aaccctgggt
      601 cgacgccagc acggcggcca cacaaaagaa aaacggcgct ccgaatggga tgatcgcgcc
      661 caccgccgtt gccgcaccca acagtgccgg gcgcggaacg tcagtcacca ggtaaacgat
      721 atacagaacc aggccctcgg caaggccgac cagaaccagg ccgttcaccg tggcgtggat
      781 cgaggcgatg gtttgccgcc cgatccggtc ggcacccgta ccgaatgcgc gagcgccggc
      841 gtggcgtaac tggacggcaa ggctgtcgcc gttcctgaac aggaagaaca acgtcagcag
      901 acaaaagcca aacatcacga cgcgatgcag gatcgcaact ccaacctggc ggccggcaaa
      961 cacatattgc ggcgtccaca gatgcgtcag gaaatccgat gccgcgtcgg ggtcggacag
     1021 gttctgctgc caccaatcgc gggtacgatt ggcgaaaatc ggcagatggc caatgacctc
     1081 cggcactgga atgccgttgc gccgcgcgct gtcgatccag gcgaacaggg tgtgcgcctc
     1141 gtgcccggcc tgcatgcccg ccaaaacgat cggcagcacg aagaccaaac caattcccaa
     1201 tgtgaacaac aggggcagca ggactttgct ctgaccgaac ggccagcgct gccggatagc
     1261 ctgatacgat ggccaaaagg caactgccag aaccccggcc catgccaggg cgcccagaaa
     1321 ctcctgcaac gtccataacc ccaggccaac cagcaccagg gcaaggacaa tccacgcgat
     1381 gcgttgcgcg cggagcggtt cgggatggct tatgcggacg tcctccattt gcgtaatgga
     1441 cacgacagcg gcgtgacgaa caagacctcc tcgggcaaag tgccgcgatc gagccgccaa
     1501 ccaccaccca aggagcaccg ccgatgtatg ttctgaacga cctgccgccg cagatcgatc
     1561 cagtgctgct cgcgcaactc ctgcacgccg agcccgcaac gatcggtcat ttccggcacc
     1621 acggcttcat ggcgccggag atcaggctgc tactgcccgg ctaccggaaa gtcgcgggaa
     1681 ccgcggtgac ggtgcgcagc tatgctgcag acacgtcaat cgtacattac gctttgggca
     1741 aattgcggcc cggggatttc ctggtgatcg accgctcggg cgacacacga cacgcagtgt
     1801 gtggcggcgg cgtggcgttc tcggccaagg cggcaggatg tgtcgggatc atcatcgacg
     1861 ggccggcaac ggacgtacag gaactgcgcg agtacgacat gccggtctgg gcgcgtgggc
     1921 tgtcgaccgt gaccggcaag cctcagttca catttggtga attctgcac
//
LOCUS       DATAVD010001727         2261 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_536012, whole genome shotgun sequence.
ACCESSION   DATAVD010001727 DATAVD010000000
VERSION     DATAVD010001727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2261)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2261)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2261
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_536012"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..478)
                     /locus_tag="VHX39_33095"
     CDS             complement(<1..478)
                     /locus_tag="VHX39_33095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996034.1"
                     /translation="MIYMVEMALIDVARRAEWDAWYLGHMKKLISIPGIQATQRFESL
                     APHASPFVALHQVTGPDVFSSVAYRAKAGPGGTGEWRDRMNNWHRNVLSGVDETPEVP
                     MEGALVIVEAGIDVPIPVQWTEAVGLDRSVQRRGIAVVASRTAAETLLGRDGVRVCK"
     gene            676..960
                     /locus_tag="VHX39_33100"
     CDS             676..960
                     /locus_tag="VHX39_33100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996035.1"
                     /translation="MRILLALAVAIVFAALMIFDTTALLRLFGACVTGGCGVSVRWIA
                     IVAGVLALAALLSWRRSNAKVKKPRVKKVGRPQPARGKATARRKPKPTAR"
     gene            complement(966..>2261)
                     /locus_tag="VHX39_33105"
     CDS             complement(966..>2261)
                     /locus_tag="VHX39_33105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996036.1"
                     /translation="NLAGVIALHRAYFKRCSFWPLGSGLVAYNCTFLLGFLNWQISSG
                     LAMLCAAGWLLWRERYPIAIIIGAMAAAVLLFFCHLMGVVFFLVLIGSAELNAMRAWR
                     DILVRCTGLLAVLVGPIALVTLAPVHDSPWAAHWPRWDVKLVNAASPLINYVLPLDVI
                     SVVLVYGGIALGVAFGWFTVAPRAAAALVILPVAYFVLPFDLMSGSFLDMRFAVMFGF
                     MLFAAVDSAPQAVTLPGSPMRRKFRVIAAGFTLLFVVRMSALANVWVAQRHDLAELRA
                     VIADVPPGAKVFFTNIPQEEAPAYWDAGPRSRRLSNGLRTDYHLPALLLIERGAFWPV
                     LFANPSQQPIRLRPDYTKLAREAHDIPSHARLVGDPNSALPALCRFDYVLMLEAGADT
                     DLANFVPQILSLESRSDFAALFRVLRRSPTCAAQAGQGE"
BASE COUNT          493 a          702 c          665 g          401 t
ORIGIN      
        1 gtttgcatac cctgacgccg tctcgcccaa gcaacgtctc tgccgcggtg cgagaggcaa
       61 cgaccgcgat cccgcgccgc tgcacgctgc gatccagtcc gaccgcttcg gtccactgca
      121 ccgggatcgg cacgtcgatg cctgcctcga cgatcaccag agctccctcc atcggcacct
      181 ccggcgtttc atcaacgccg gaaagcacat tcctgtgcca gttattcatg cgatcccgcc
      241 attcaccggt gccccctgga ccggccttgg cacggtaggc gacgctgctg aacacatccg
      301 gcccggtcac ctggtgtaac gccacgaacg gcgacgcgtg gggcgcaagc gattcgaatc
      361 gctgagttgc ctgaatgccc ggaatcgaga tcagcttttt catgtggccg agataccacg
      421 cgtcccactc ggcgcggcgc gcgacatcga tcagcgccat ctcaaccatg tagatcattg
      481 ctttcgcccg tcgttgaatt ctgcccggag cattcccgtt caggtcaacg gattttcacc
      541 ctgcatcctc agtgtgtaaa tgccatggcg cgttgccggg tcagaatact gttcaggcgg
      601 caaacacgag agatgacacc gttcgccgcc atagcctctt gaccgcgacg gttcgttcgg
      661 gaaaccacct cggacatgcg catccttctg gctctcgccg ttgctatcgt gtttgcggcc
      721 ctgatgatat tcgatacaac tgcattgctt cggctgttcg gtgcttgtgt caccggcggc
      781 tgtggggtgt ccgtgcgctg gattgccatc gtcgctggcg tgcttgcgtt ggccgcgttg
      841 ctttcatggc ggcggtccaa tgcaaaagtg aagaagccgc gtgtcaaaaa ggttggccgg
      901 ccacagccgg cgcgtggcaa ggcgacggca cgacgaaagc cgaaaccaac agcgaggtaa
      961 ccagtttatt ccccctggcc ggcttgtgcg gcgcaggtcg gcgagcgtct caggacacga
     1021 aacaaggcag cgaaatccga tcgcgattcg agagagagga tttgggggac gaagttcgca
     1081 agatcggtgt ccgctcccgc ttccagcatg aggacgtagt cgaaacgaca tagtgccggc
     1141 agcgcactgt tgggatctcc caccaggcgg gcgtgggacg ggatgtcatg cgcctcgcga
     1201 gccagttttg tgtaatcggg tcgcaatcgg atgggctgct gtgacggatt ggcgaacagc
     1261 accggccaga aagcgccccg ttcaatcaga agtagcgcgg gcagatgata atcggtgcgc
     1321 agcccattgg agagacggcg actgcgcggt cccgcgtccc aatacgccgg cgcttcttct
     1381 tgtgggatat tggtaaagaa gacctttgcc cccggcggga cgtcggcaat gacagcacgc
     1441 aactctgcga ggtcgtgccg ttgcgcaacc cacacgttgg ccagcgccga cattcgcaca
     1501 acgaacaaga gcgtgaaacc ggcagcaatg acgcgaaact tccggcgcat tgggctgccc
     1561 gggagcgtga ccgcctgagg cgcagaatct accgctgcaa acagcatgaa accgaacatg
     1621 acggcaaacc gcatgtcgag aaagcttccg ctcatcagat cgaaaggcag cacgaaatag
     1681 gcaaccggaa gtatcaccaa ggccgcggca gcgcggggcg ccacggtgaa ccagccgaac
     1741 gcgactccca aagcgatgcc gccataaacc agcacgacgc tgatcacgtc gagcggcaat
     1801 acgtaattga tgagtgggct cgccgcgttt accagtttca catcccatct gggccaatgc
     1861 gccgcccagg gtgaatcgtg caccggcgcg agcgttacaa gagcgattgg acccaccagg
     1921 accgccaaca atcctgtgca gcgaaccaat atatcccgcc aggcccgcat cgcattcagt
     1981 tcggcactgc cgatcagcac gagaaaaaat accacgccca tcagatgaca gaaaaacagc
     2041 aacacggctg ccgccatcgc gccgattatg atcgcgatgg ggtaacgttc ccgccataac
     2101 agccaaccgg cggcgcacag catcgccagc ccgctgctta tttgccagtt caaaaagccg
     2161 agcagaaacg tgcaattata ggcgacgagg ccggatccga gtggccagaa cgagcacctt
     2221 ttgaagtaag cgcggtgcaa cgcgatgacg ccggccaggt t
//
LOCUS       DATAVD010001728         3668 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2025742, whole genome shotgun sequence.
ACCESSION   DATAVD010001728 DATAVD010000000
VERSION     DATAVD010001728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3668
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2025742"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="VHX39_33110"
     CDS             <1..301
                     /locus_tag="VHX39_33110"
                     /inference="COORDINATES: protein motif:HMM:NF024905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEX3996037.1"
                     /translation="GTAIGVPLGIACLPLALHAPLLVWMAAALAMVVYAMALPERYDI
                     ACAAYAFTLMVTLAVTGEHSMPVLAARAWETLLGAGLGATAALVVLPLRPRRPLA"
     gene            486..1457
                     /locus_tag="VHX39_33115"
     CDS             486..1457
                     /locus_tag="VHX39_33115"
                     /inference="COORDINATES: protein motif:HMM:NF024923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEX3996038.1"
                     /translation="MTRRRRIGLTVATMFGVFALYEIATSVVAYTADAYVQSDLVALA
                     PQITGRIIGVHVSDNQSVAQGDLLATIDPLPFQLAVDQRQAELNEAHAQLAADRDTVA
                     TAQDAFAGATAAAAYARDTQSRAAALATSQAGSRAELDQANDALSRAEAALDGAQAAV
                     ARAQSTAAMHQAAQLRAAEALDFVQWQLARTRLSTPTSGTITNLTAQVGDTAQADMPL
                     IGIVDAHAWRIIANYKQSYLRFIAPGDTAWVWLNYDPWRLHRARVAGIARGIARNPVP
                     GGLLAYVAPTTDWIRLERRFPVALTLVDPPADLKLYMGADARVLIVP"
     gene            1454..2563
                     /locus_tag="VHX39_33120"
     CDS             1454..2563
                     /locus_tag="VHX39_33120"
                     /inference="COORDINATES: protein motif:HMM:NF016513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEX3996039.1"
                     /translation="MSGLVAVAAPVRRAIQQVAIALRQDLAEMHLVAGRGPQCSMTAL
                     AVTLATTVALAARVDAVWWAAISAFVSTRATAPASLQRGGLRIAGTAAGAVLALLLSP
                     WLVEDHVALTMVLLVASACGVAGFLVSPHGYAWLLGAVTTDMVLLAALGDPLSVLTVA
                     CNRTAEVTIGTFAAILVVVVLAPDTAPVQPSVAPGWSSLLGVQWPTLQYALQAGTAVM
                     LVPWIWNWLELPVVSQTAITVAAVMAVPALSNDAAADRQTVMRRGIHRILGCLLGGIA
                     GLACLALPVQSFGLWLLMLTAGVWVAAHLQASARGIGYVGTQAAVVFITTLVQDWGPP
                     SSIFPGIERLAGIAGGLVILFVITVVTAPSTRKLG"
     gene            2996..3208
                     /locus_tag="VHX39_33125"
     CDS             2996..3208
                     /locus_tag="VHX39_33125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996040.1"
                     /translation="MFLRKTQRKKDGKTHSYWSVVENQRLRGGRVVQHHVLYLGEINS
                     SQAVVWRKAIEVLDEVSAPVEHTRRQ"
     gene            complement(3245..3668)
                     /locus_tag="VHX39_33130"
                     /pseudo
     CDS             complement(3245..3668)
                     /locus_tag="VHX39_33130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612399.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
BASE COUNT          591 a         1224 c         1179 g          674 t
ORIGIN      
        1 cggaaccgcc ataggcgtgc cgttgggcat cgcctgcctg cccctcgcgt tgcacgctcc
       61 gcttttggtc tggatggcgg ccgcgctggc gatggtcgtc tacgcgatgg cgttgcctga
      121 gcgatacgac atcgcctgcg cggcctatgc attcacactg atggtcacgc tggccgtcac
      181 cggtgagcat tcgatgccag tgcttgctgc acgcgcgtgg gaaacattgc tcggcgcagg
      241 gctcggtgcg acggcggcac tggtggtgct gccgcttcgc cctagacggc cactggctta
      301 acggacggcg tcgtatcacg tgcccttgga agattggtgc cgggtttgcc gaccgcgtca
      361 tcggcggcta atcttacggg tcgcactggt ttgacggcgt cgaaccggca tagaacagtg
      421 atggctttcc aacagggggc ttgcatgcgc gtcgttgcca atgcgtggcg tctgcaccaa
      481 tctcgatgac gcgccggcga cgcatcggcc tcacggtcgc gacgatgttc ggtgtcttcg
      541 cgctgtacga gatcgcaacg tcggtcgtcg cctataccgc cgacgcgtat gtgcagtccg
      601 acctcgtcgc cctggcgccg cagatcaccg gtcgtatcat cggcgtgcac gtctccgaca
      661 atcagagcgt cgcgcagggc gatctgctgg ccacgatcga tccgctcccc ttccaacttg
      721 ccgtcgacca gcgccaggcc gaactcaacg aagcccatgc ccaactggcc gccgatcgag
      781 acaccgtcgc caccgcccag gacgcgttcg ctggcgccac cgcggcggcg gcctatgcac
      841 gggacacgca gtcccgcgcc gctgccctgg cgacctcgca ggccggctcg cgcgccgaac
      901 ttgaccaggc aaacgacgcg ctgagccgtg ccgaggcggc gctcgatggc gcgcaagccg
      961 ccgtcgcgcg ggcccaatct accgctgcca tgcatcaggc ggcgcaattg cgggccgcgg
     1021 aggcgctcga cttcgtgcaa tggcaactcg cgcgcacgcg gctgtcgaca ccgaccagcg
     1081 gtaccatcac caacctgacg gcccaggtcg gcgataccgc acaggccgac atgcctctca
     1141 tcggcatcgt cgacgcgcat gcgtggcgaa tcatcgccaa ttacaaacag agttacctcc
     1201 gcttcattgc ccctggcgac accgcctggg tgtggctgaa ttacgaccca tggcgtttgc
     1261 accgagcacg ggttgccggg atcgcccgcg gcatcgcccg caacccggtg cctggcggtc
     1321 tgctggctta tgtcgcgccc accaccgact ggatccgctt ggagcgccga tttccagtcg
     1381 cgctgacgct ggtcgatccg ccggcagact tgaagctcta catgggggcc gacgccaggg
     1441 tgctcatcgt gccatgagcg ggctggttgc cgttgcagca ccggtgcgcc gtgcaatcca
     1501 gcaggtcgct atcgcgctcc gccaggacct ggccgaaatg cacttggtcg ccggccgcgg
     1561 tccgcaatgc agcatgaccg cactagcggt gacgcttgcc accacagtgg ccctggcggc
     1621 gcgtgtcgac gcggtatggt gggccgcgat aagcgcgttc gtttcgacgc gcgcgaccgc
     1681 gcccgcctca ttgcagcggg gcggcctgcg cattgccggc acggccgccg gcgctgtgct
     1741 ggcactgttg ctgagcccct ggctggtcga agaccatgtt gcactgacca tggtattgct
     1801 ggtggccagc gcctgcggcg tcgctggctt cctcgtcagc ccgcacggct atgcttggct
     1861 gctcggcgcg gtcaccacgg acatggtgct gctcgctgcc cttggcgatc cgctctcggt
     1921 gctgacggtc gcctgcaacc ggacggccga ggtcaccatt ggcacctttg ccgcgatcct
     1981 cgtggttgtc gtcctggcgc cagacacggc gccagtgcag ccgtccgtcg cgccgggctg
     2041 gtccagcctg ctgggcgtcc agtggccgac gctgcagtat gcgctgcagg ccggcacggc
     2101 cgtgatgctg gttccgtgga tctggaactg gctggaattg cctgtggttt cacagaccgc
     2161 gatcacggtc gccgctgtca tggcggtgcc ggcgctgtca aatgacgcgg cggcagatcg
     2221 acagacggtc atgcggcgcg gcattcaccg catcctcggc tgcctgcttg gtgggatcgc
     2281 cgggctggcg tgcctggcat tgccggtcca gagctttggc ctgtggctgc tgatgctgac
     2341 ggcaggcgtg tgggtcgcgg cacacctaca ggcaagcgcg cgcggcatcg gttacgtcgg
     2401 cacgcaggca gccgtcgtgt tcataacgac tctggttcaa gattgggggc ctccgagcag
     2461 catctttccc ggcattgagc gccttgccgg cattgcgggc ggcctagtta tcttgttcgt
     2521 gataacggtg gtgacggcgc cttcgacccg caaactcggg taaggcttcg gaacgtggca
     2581 gccaaccgcc cgacgaagga ttgcgacgaa aagccggggg ccagcgatgc atcgtagctc
     2641 agcttcccct gcagtccgtg cacggtgaac aggtcaacgc cggcttccag cttgccgacc
     2701 acatccggca ggcgggagcg ggcggagaag gtcgctgccg ggtccaactg gaaagcggcc
     2761 tggctcgtcc aatcatcgtt gatatagaac ccgcccccga atccggcata ggcccgtagc
     2821 gaaccggcat cccctagccc gccttcgctc ccggaaactt cgattttggt ctggcttgtg
     2881 gccggtaggc ttctgataac acagaaaaat gccgccctgt cacggccaaa aaccgctgta
     2941 gtgaagacct acccgattcc cacaagtgga ttcgcctcgc tagattcgcc gggtcatgtt
     3001 cctgcgcaag acccaacgga agaaggacgg caagacccac agctattgga gcgtggtcga
     3061 gaatcaacgt cttcgtggcg gccgtgtggt gcagcaccac gtgctgtacc tcggtgagat
     3121 caactcttcg caggcagtgg tctggcgcaa ggccatcgag gtcctcgatg aggtgtcagc
     3181 gccggttgag cacacccgcc gccagtagcg gctcgccgtc gtccggtaca aacggttcgt
     3241 gttgacgagg ggcgcggctc agctgctcga tcgacttcct gaggttctga agcaggtgaa
     3301 agcgatctgc gacctgcagg gcttggggtg ctccctgacg ggcgccgtca gcataaaggc
     3361 cagcgcggtc acgactgaca acctcgatct tcgaacgacc ggtgagccaa tgcgatgtca
     3421 catcagctga acggtccgct aacacatcga gaacctcccg ccgctccaga tccaccagaa
     3481 ttgtcccgta ggttgtgcct ttgcgccaac cccagtcatc aatgccaacc acgcgaaccg
     3541 gggccttttc ctggcgcctg gccgcgtgtc gcttcagcga tcgcaacagt gtgtcgtcgc
     3601 tctgaggcaa tcccaggcgc gtcaccagcc tctcggccgg ccggccaccg gccgcatgcg
     3661 tcggcaga
//
LOCUS       DATAVD010001729         3405 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2211325, whole genome shotgun sequence.
ACCESSION   DATAVD010001729 DATAVD010000000
VERSION     DATAVD010001729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3405
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2211325"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..360
                     /locus_tag="VHX39_33135"
     CDS             <1..360
                     /locus_tag="VHX39_33135"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3996041.1"
                     /translation="IALFGATEDHPAGTGLHHVAMEVPTLDEIVRIREHLREHQIPIN
                     LDGRRGAGVQLVVEFRDPDGHLLEIYWGIDQIGSEGIVRPEDEWKPVRSLEAAIANPV
                     EGQDTSVHATQYLLSQP"
     gene            357..923
                     /locus_tag="VHX39_33140"
     CDS             357..923
                     /locus_tag="VHX39_33140"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3996042.1"
                     /translation="MSVPLQELKRQHGTPFQLRKIGHVALFVSDVERSVRFYVDVLGF
                     RISDLYQEDMMPGGAAFIRLNTDHHGIALFKATQNRDPGAGLHHMAFEVGSLDEVFRA
                     RNHLRNHNVPIHFEGRRRAGVQLAVEFRDPDGHNLEIYWGIDQIGSEGKARPANQWKG
                     ASSLESAIADPVIGQDTSLLDPSLAHAG"
     gene            complement(934..1725)
                     /locus_tag="VHX39_33145"
     CDS             complement(934..1725)
                     /locus_tag="VHX39_33145"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX3996043.1"
                     /translation="MSELQFQRGAATTYEQCMGQLSALLVPGVLSAACLSPGMRVLDI
                     ATGTGLVARAAAAEVGPSGHITATDVSPSMLEQARANLADLANVSFGIENAQSLTFSD
                     ETFDAVICGLGVMFFPDPARAVAEFYRVLRPGGYAAISVNPDAARTLVLRVLVVIDRH
                     TQGQKARSGPVTFKGHEPRLRALFETAGFREVATAAETRTIPFPSFDAYFDAIEQGAG
                     IAGQEYLAQTLAVRAAVREDIRAGLHNTGGPIQVDVDITYASGRR"
     gene            complement(1811..3301)
                     /locus_tag="VHX39_33150"
     CDS             complement(1811..3301)
                     /locus_tag="VHX39_33150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015074559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEX3996044.1"
                     /translation="MSLIHLRNVGVISPRVLFKNLDLTIHETDRIGLIAGNGMGKTTL
                     LRCLAGQAEPGIGEITCRRGLRIGFVEQDIPANLLDLAMNEAIRRALPLTERETSSWK
                     IGLVLDMLDTPAEMRERKLSELSGGWQRLALIARVWVSDPDVLLLDEPTNHLDGQRLG
                     LLENWINHATDGVAMLIASHDRQFLDNCTNRTLFLRPEESRDFAHPFSVARGLLADED
                     AARETKLARDAKEADRLRRSAGHLRNVGINSGSDTWLKKSKQLANRADAIEQSLRPLT
                     PTRAGEIRLSNRGTHAKVLLALDNVPVTTPDGRTLFNSGDLKVFQRDHIVVTGANGVG
                     KSLFVRLLRRAVRGETVAGITVSPTLVLGYVDQQMSQLPAAETLLGFVTGEFRLGDQR
                     SVSLLAGAGFDIATQRRPVERLSPGQKARLGLLALRLAEPNFYLMDEPTNHVDIAGLE
                     RLEAEILAQEATCVLVSHDRFFVRAIGTRFIHIEKGRMLEIEAPGQ"
BASE COUNT          681 a         1058 c         1025 g          641 t
ORIGIN      
        1 atcgctctgt tcggcgcgac cgaggatcat ccggccggca ccggcctgca ccatgtcgcc
       61 atggaagtgc cgacattgga cgaaatcgtt cgtatccggg aacatctgcg tgagcatcag
      121 atcccgatca acctcgacgg ccgacgcggc gccggagtgc aattggtcgt cgagttccgc
      181 gatcccgacg gccatttgct ggagatctac tggggcatcg atcagatcgg ctccgagggg
      241 atcgtccgtc cggaagacga atggaagccg gtccgctcgc tggaagcggc gatcgccaac
      301 ccggtcgagg gccaggatac ttctgtccat gccacccaat atcttctgag ccaaccatga
      361 gtgtacctct gcaagaactg aagcggcagc acggaacacc gttccagttg cgcaagatcg
      421 gccatgtcgc gctgttcgtg tcggatgtcg aacggtcagt gcggttttat gtcgacgtgc
      481 tcggattccg gatttcggat ctgtaccagg aagacatgat gccgggcggt gccgcattca
      541 tccggctgaa caccgatcat cacggcatcg ctctgttcaa ggcgacgcag aatcgtgatc
      601 ccggcgccgg gctgcaccac atggcgttcg aggtcggctc gttggacgaa gtgttccgcg
      661 cccgcaacca tttgcgcaat cacaacgtgc cgatccattt cgagggtcgc cgccgggccg
      721 gcgtgcagct cgccgtcgag ttccgcgatc cggacgggca caatctggag atttattggg
      781 gcatcgacca gatcggctcc gagggcaaag cgcggccggc caaccagtgg aagggtgcga
      841 gcagcctgga atcagcgatt gccgacccgg tgatcgggca ggatacatcg ctgctggatc
      901 cgtcgctggc tcacgccggt tgagggacgg cggttaccgc cgtccgctcg cataggtgat
      961 gtcgacgtcg acctgaattg gacctccggt gttatggagg cctgcacgga tatcttcgcg
     1021 cacggccgca cgtaccgcaa gagtctgagc caaatactcc tggcccgcga tgccggcgcc
     1081 ctgctcgatg gcgtcgaaat aagcatcgaa cgatggaaac ggaatggtgc gggtttccgc
     1141 tgccgttgcc acctcgcgaa agccggccgt ttcgaacaac gcacgcagcc gcggctcatg
     1201 acctttaaac gtgaccggac ccgaacgcgc cttttggcct tgcgtatgac gatcgatcac
     1261 gaccaaaacc cgcaagacca aggtgcgggc cgcatcggga ttgaccgaaa tggccgcgta
     1321 accgccgggt cgcagcacgc ggtaaaactc tgcgacagcg cgtgccggat cggggaaaaa
     1381 cataacgccc agaccacaaa tgaccgcatc gaaggtttcg tcgctgaagg tcagcgactg
     1441 agcgttctcg ataccgaacg aaacattggc aagatcggcg aggttcgcgc gagcctgctc
     1501 aagcatcgag ggcgagacat cggtggcggt gatatgaccg gacggtccga cctcggcagc
     1561 agcagcccgg gccacaagtc cagtaccggt cgcaatgtcc agcacccgca tccctgggct
     1621 taggcatgcc gcggacagaa ccccgggaac cagaagtgcc gacaactgcc ccatgcattg
     1681 ttcgtacgtc gtggcggcgc ctcgttgaaa ctgaagttcg ctcatttcgc ggtcctgcgg
     1741 tgggaacgga tcgaaaatat ggcggacggt aatgggacac gcaaacctgc ccgccacggt
     1801 tcgacgatcg ttattgtccc ggtgcctcga tttccagcat tcttcccttt tcgatatgaa
     1861 taaaccgcgt gccgatcgcg cgcacgaaaa accggtcgtg tgagaccaga acgcaggttg
     1921 cctcctgcgc caggatctca gcttccagtc gttccagacc ggcgatatcg acatggttgg
     1981 tcggttcgtc catcaggtag aaattgggct ccgccagacg caacgccagc aaaccaagcc
     2041 gcgccttctg acccggcgac aatcgttcaa ccggccggcg ttgcgttgct atgtcgaaac
     2101 ctgctccggc gagtagactg acgctgcgct gatcccccag acggaattcg ccggtcacga
     2161 agccaagtaa ggtttctgcc gcgggcagct gcgacatctg ctgatcgaca tatcccagca
     2221 ccagcgtcgg actgaccgta atgccggcaa ccgtttcgcc cctgacggca cggcgcaaca
     2281 gccgcacaaa caacgatttg ccgaccccat tcgcgccggt taccacgatg tggtcgcgtt
     2341 ggaacacctt caaatcgccg gaattgaaca gcgtgcgtcc atccggtgtc gtgaccggaa
     2401 cgttgtccaa tgcaagcaac actttggcgt gcgtgccgcg attgctcaaa cggatttcgc
     2461 cggcgcgggt tggtgtcagc gggcgcaacg actgctcgat cgcgtcggcg cggttggcga
     2521 gttgtttcga tttcttcaac caggtgtcgc tgccgctgtt gatgccgaca ttgcgcaaat
     2581 gcccggcgct gcggcgcaaa cggtctgcct ccttggcatc gcgagcgagt tttgtctcgc
     2641 gtgccgcgtc ttcgtcggcc agcaggccac gcgcaacact gaatggatgt gcaaaatccc
     2701 gcgattcctc cggccgcaga aacagcgtcc tgttcgtgca attgtcgagg aattgccggt
     2761 cgtgactggc aatcaacatc gccacgccgt cggtcgcatg gttgatccag ttttccaaca
     2821 aaccgagccg ctggccgtcg agatggttgg tcggctcatc cagcagcagg acgtccggat
     2881 cgctgaccca aacccgcgct atcaacgcca gccgctgcca cccgccactg agttcggaca
     2941 gtttccgctc acgcatctca gccggggtgt ccagcatgtc cagcacaagg ccgattttcc
     3001 aggatgacgt ctcacgctcg gtcagcggca gcgcccgccg gatcgcttca ttcattgcca
     3061 aatcgagcag attggccggg atgtcctgtt ctacgaaacc aatacgcaaa ccgcggcggc
     3121 aggtgatttc cccaatccca ggctccgcct ggccggcgag gcagcgcagc agcgtggttt
     3181 tgcccatgcc attgccggcg atcaacccga ttcggtcggt ttcgtggatc gtcaggtcga
     3241 ggtttttgaa cagcacgcgc ggcgagatca cgccgacatt acgcagatgg atcaaactca
     3301 tggttgcttc cgtgtccagc ccggccaccg aagcggcgcg aggtcatgcc aatgggcggg
     3361 cggaacaatc gccggacggg cggaaggtcg tcagatccag cgttc
//
LOCUS       DATAVD010001730         1512 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2587309, whole genome shotgun sequence.
ACCESSION   DATAVD010001730 DATAVD010000000
VERSION     DATAVD010001730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2587309"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1284)
                     /locus_tag="VHX39_33155"
     CDS             complement(<1..1284)
                     /locus_tag="VHX39_33155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3996045.1"
                     /translation="MPRMTGGDAIVDGLIRHGIDTMFGLPGVQTYGLFDALARNANRI
                     RLINARHEQTTAYMALGYSCATGKPSAYSVVPGPGVMNTAAALTTAWGVNAPVLCVTG
                     QVPGPMIGRLRGQLHELKDQLATMKTLVKHADRIDHPTEAPVKVARAFQEMLSGRRGP
                     ASIEMPWEQFASVAEVTPMDPLPPLPNPTPDPERIAALAKLVDAAKAPMIWVGGGALH
                     ASAEVLALAEKIGAPVVSFRGGRGIVDDRHRLGLTVPSALKLWPMTDLLIGIGTRLDV
                     PMGRWGGMPPGAKLARIDIDPAEMHRVRADVPIVADAADGARALLAAVQPRADGERAA
                     LIAQAKKDGWEVLTSVQPQMSYLEVIRELLPEDGILCDEMTQVGYVSWFGFPFHSPRT
                     LITSGFSGTLGAGFPTALGVKVGQPNRPVVAVTGDG"
BASE COUNT          276 a          525 c          469 g          242 t
ORIGIN      
        1 gccatcgccg gtcaccgcca ccaccggccg gttcggctgc ccgaccttga cccccagagc
       61 ggtcgggaag cccgccccca acgtcccgga aaaccctgag gtaatcagcg ttctcggcga
      121 atggaacgga aagccgaacc acgacacata gccgacctgg gtcatttcat cgcacagaat
      181 gccgtcttcg ggcagcagct cgcggatcac ctccagatac gacatctgcg gctgcactga
      241 cgtcagcacc tcccacccat cctttttcgc ctgagcgatc agcgccgcgc gttccccatc
      301 cgccctgggc tgcaccgcag cgagcaaagc gcgcgcacca tcggcggcat cggcaacgat
      361 cggcacgtcg gcccgcaccc ggtgcatctc cgccggatcg atgtcgatgc gcgccagttt
      421 cgcccccggc ggcatgccgc cccaacgccc catcggcacg tcgagccgcg tgccgatgcc
      481 aatcagcaga tcggtcattg gccagagctt cagagccgac ggcacggtca gacccagacg
      541 atgccggtca tcgacgatgc ctcgcccgcc acggaaggag accaccggcg caccgatttt
      601 ctcggccaaa gccaggactt cagcgctggc gtgcagcgcg ccgccgccaa cccagatcat
      661 tggcgccttt gccgcatcga ccagcttcgc cagtgcggca atccgctcgg ggtcaggggt
      721 cgggttgggt aatggcggca gcgggtccat cggcgtcacc tcggcgaccg aggcgaattg
      781 ttcccacggc atctcgatcg atgcgggtcc gcgccggccc gacagcattt cctggaacgc
      841 ccgcgcgacc ttgaccggtg cctcggtcgg gtggtcgatg cggtcggcat gtttcaccag
      901 cgtcttcatc gttgccagct ggtctttcag ctcgtgcaac tggccgcgca gccggccgat
      961 catcggcccc ggcacctgac cggtcacgca cagcaccggc gcgttcacgc cccacgccgt
     1021 tgtcagcgcc gccgcggtgt tcatcacgcc aggcccagga acgacggagt aggcggaggg
     1081 cttgccagtg gcgcaggaat agccgagggc catataggcc gtggtttgct cgtgacgggc
     1141 attgatcagc cggatgcggt tggcattgcg ggccaatgca tcgaacaagc cataggtctg
     1201 cacaccgggc aggccgaaca tcgtatctat accgtgacga atcaatccgt cgacgatggc
     1261 gtctccgccg gtcatacgcg gcatgcttga gtacccctgg ctgtgcgacc cccggagact
     1321 gccacaaccg ggggccggcg cgaagcgggc cgcctccgtc tgggcggatg atataacgtt
     1381 gccgaaagga atttgcgggt cacggaaccg atgccggcca caagcatatg gacgggggcg
     1441 aaaactatcg ctagaagccc ccgccggttt gggagacgtc ggtgcccgga gtcctggatg
     1501 aataaagcaa tc
//
LOCUS       DATAVD010001731         3141 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2957136, whole genome shotgun sequence.
ACCESSION   DATAVD010001731 DATAVD010000000
VERSION     DATAVD010001731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3141
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2957136"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1868
                     /locus_tag="VHX39_33160"
     CDS             <1..1868
                     /locus_tag="VHX39_33160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996046.1"
                     /translation="AEISLASTRVRLAQAKLFGDTPILAITGGKVTLTPESQLVLAAL
                     DAFLSQPLVTTPIIQLPAANDAAAGPLLWDTQSLLSLQGLAEGYISFAEQHLSDSLPR
                     SLRDSIEVAAGQRIKMLTQNAIAQAVTAGSAVPFGKGAAALREEIGDFANAVPVMTNL
                     RVALHQSQQSGAADQLDGLLFAQATRLLGQVDALLTAADPYQLADPTLSFWTGVPPLA
                     APAFGAASLADLTATLPARRDYVEALLRDYASPLVAYLQQSGVVPTGTSEALLARWQA
                     IAATLAAYHQGDEVNSLSRLEQFIAGDMDATTLANCRQTAGSAGAGSDWFGQQLQNLR
                     HAVLDRCAAVMNTDATSGYADLTAAFDQTLAGRFPFGPPNAPDADPGDVKRFFSAYGP
                     MFVDLQAQLVQLPAYNRAGAAQFVADLAQDQTVLAPLLTNPAPDATLSYTAAIDFRTN
                     VGSDPGANQIAETDVEVGQQTVSSFSATPSIAWTSGQPVQVRLHWATNAPAEPITAAD
                     PVPQVNSRVVSFNYSGAWALLRMLAAQRPDPATLAQLWDRRPETVKFAVALRPNPQAA
                     SGGQVGLTTARLFMRFGLTETLKVAGQPDRQIAIVLPNFPTAAPPPPAQAMPLYP"
     gene            1865..2977
                     /gene="tssA"
                     /locus_tag="VHX39_33165"
     CDS             1865..2977
                     /gene="tssA"
                     /locus_tag="VHX39_33165"
                     /inference="COORDINATES: protein motif:HMM:TIGR03363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system protein TssA"
                     /protein_id="HEX3996047.1"
                     /translation="MSATGDIITGLACLLAPIDGDNETGNDLRLSPIYRAIAEARREE
                     NARLPQGIWTRNIKRADWPMVERLCLEALQHHGKDLQVAAWVTEAWTRQHGFAGLGAG
                     LDLLTRLCRMFWPGLHPAIEDDDFGPRIAPFEWLNAYFPALLRDMPIVRAAGETERAY
                     TWTDYVNGQLLESLRQRDPRSFEKSEAAGAVTLAAFAAAREQTELAFFRELHTGLEAA
                     ATALAELNTTLGQVCGREAPGLGGIGTALSDIQGLISAEFTERNKSILTMPLRAAHPA
                     VPAAVPTPAAQQAVSPATPAQLYAQLTQIAEMLHRMEPHSPAPYLIDRAVAWGEMSFA
                     ELIGMFASSGLALEGVMHLLGLAADDGVAAPLTDSE"
BASE COUNT          582 a         1047 c          974 g          538 t
ORIGIN      
        1 tcgccgaaat ctccctggcc agcacgcgtg tccggctcgc gcaagcgaag ctgttcggcg
       61 acacgccgat cctcgcgatc accggcggaa aggtcaccct cacgccggag tcacagttgg
      121 tgctcgccgc gctggatgcc tttctttcgc agccactggt gacgacgccg atcatccagc
      181 tgcctgcggc caacgatgct gccgccggtc cgctcctgtg ggacacccag agcctactct
      241 cgctgcaagg gctggcggaa ggttatatca gtttcgccga acaacacctt tcggacagcc
      301 tgccacggtc actgcgcgac agcatcgagg tggccgcggg ccaacgcatc aaaatgctga
      361 cacagaacgc cattgcacag gcggtaacgg cgggaagcgc cgttcccttc ggtaaaggtg
      421 ccgcggcgct gcgcgaagag atcggagact tcgccaacgc ggtgcctgtc atgaccaacc
      481 tgcgcgtggc gcttcaccaa tcgcagcagt ccggcgcagc cgaccagctt gatggcctgc
      541 tgttcgcaca ggcgacacgg ctgctcggcc aggtggacgc gttgctgacc gcggcagatc
      601 cctatcagct cgccgatccg acgctgtcct tctggaccgg cgtgccacca ctcgctgcgc
      661 ccgcttttgg cgccgcgagc ctggccgatt tgactgcgac gctgccggcg cggcgcgatt
      721 atgtggaggc gctgttgcgc gattatgcgt caccattggt cgcgtatctg caacaaagcg
      781 gcgtggtgcc gaccggaacg agtgaggccc tgcttgcccg gtggcaggcg atcgcggcta
      841 cgctcgcggc ctaccatcaa ggtgatgagg taaattcgct gagccggctg gagcagttca
      901 tcgccggcga catggacgcg accacgctgg ccaattgccg ccaaacggcc ggttcggccg
      961 gagcaggaag tgattggttt gggcaacagc tgcaaaatct ccgccatgcg gtgctcgacc
     1021 gctgcgccgc cgtgatgaac accgacgcga cgagcggtta cgcagacctc accgcggcgt
     1081 tcgaccaaac tctcgccggc cgtttcccgt tcggcccccc gaatgcgcca gacgccgacc
     1141 cgggcgacgt aaagcgtttc ttttccgcgt acggcccgat gttcgttgat ctgcaagcac
     1201 agctcgtcca actgcccgcc tataatcgcg cgggcgccgc gcaattcgtc gccgatctgg
     1261 cgcaggacca gaccgtgctg gcgccgctgc tgaccaaccc cgcgccggat gcgacactaa
     1321 gctacacggc ggccatcgac ttccgcacga atgtcggtag cgaccctggc gccaaccaga
     1381 tcgccgagac ggatgtcgag gttggccaac agactgtttc ctcgttcagc gccaccccca
     1441 gcatcgcatg gacgagtggg cagccggtgc aagtgcggct gcactgggca acgaacgcgc
     1501 ctgccgagcc aatcactgcc gccgacccag tgccgcaagt caacagccgc gtggtcagtt
     1561 tcaactattc aggcgcttgg gcgctgctgc gcatgctcgc ggcacagcgg ccagacccgg
     1621 cgacgctcgc acaactgtgg gatcggcggc cggagaccgt gaaattcgcc gttgccttgc
     1681 gccccaatcc acaagcggcc agcggtggcc aagtcggcct gaccaccgca cggttgttca
     1741 tgcgcttcgg gttaacggaa acactgaagg tcgctggaca gccggaccgg caaatcgcga
     1801 tcgttctgcc gaacttccca accgccgcgc ccccaccgcc ggcgcaagcg atgccgcttt
     1861 atccatgagc gccactgggg acatcatcac cggcctcgct tgcctgctcg cgccgatcga
     1921 tggcgacaac gaaaccggga acgatctgcg cctcagtccg atctatcgcg cgattgcgga
     1981 ggcgcgacgc gaggagaacg cgcggctgcc gcaaggcatc tggacgcgca atatcaagcg
     2041 cgccgactgg ccgatggtag agcgtttgtg ccttgaagcg cttcaacatc acggcaagga
     2101 tttgcaggtc gccgcctggg tgaccgaagc ctggacgcgc cagcacggct tcgcggggct
     2161 tggtgccggc ctcgacctgc tgacccgtct gtgccggatg ttctggccag ggctgcatcc
     2221 cgcaatcgaa gatgatgatt tcggccctcg catcgcgccg ttcgagtggc taaatgccta
     2281 tttcccggcg ctgctgcgcg acatgccgat cgtgcgtgcg gccggggaaa cggagagagc
     2341 ctatacttgg accgattacg tgaacggcca actgctcgaa agcctgcgcc aacgcgatcc
     2401 acgctcgttt gaaaagtccg aggcggcggg ggccgtgaca ctcgccgcct tcgccgccgc
     2461 ccgcgagcag accgagttgg cctttttccg cgagctccat accgggctcg aggcggcggc
     2521 gaccgcgctc gcggagttga acaccacgtt gggacaggta tgcggacgtg aggccccggg
     2581 cctgggcggc atcggcacgg cgctgtccga catccagggg ctgatcagcg cggaattcac
     2641 cgaacgcaac aagtcgattt tgaccatgcc gctgcgggcc gcccacccgg cggtacccgc
     2701 agcggtaccg acaccggctg cgcagcaagc cgtctcacca gccacgccgg cacagctcta
     2761 cgcccagctc acgcagattg cagagatgtt gcaccggatg gagccacaca gcccggctcc
     2821 atatttgata gatcgcgccg ttgcatgggg cgagatgtca ttcgccgagc tgatcggcat
     2881 gttcgcctcg tcggggctcg cgctggaagg ggtcatgcat ctactcggtt tggcggctga
     2941 cgacggcgtc gcggctccac tgactgacag tgaatgaaat tatcacaaaa acgtaccaga
     3001 acggtgcgtt tttgactgga cacaaagacc cattcagcat ttacttcaat taccagtgga
     3061 aggtggcgcg aggctgcaat gaatgaaagc acacagcacg ttctaacgcg cgtccgtccg
     3121 ccgcgcgtta aaatcactta c
//
LOCUS       DATAVD010001732         1618 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1094216, whole genome shotgun sequence.
ACCESSION   DATAVD010001732 DATAVD010000000
VERSION     DATAVD010001732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1094216"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1208)
                     /locus_tag="VHX39_33170"
     CDS             complement(<1..1208)
                     /locus_tag="VHX39_33170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEX3996048.1"
                     /translation="MTWDDARARTALRRLFDAAVAASDPRRVLAEHLPHKPAAGRCIV
                     VGGGKSAAVMAAALEDAWPDVALEGAVVTRYGHAVPTRRIEVIEASHPVPDANSERGA
                     RRLLQLVQGLTPQDLVIALMSGGASALLAAPAPGLTLDDKQAINRALLASGASIGEMN
                     TVRKHLSAIKGGRLAAAASPARVVTLAISDVPGDDPAVIGSGPTVPDPTTFADARALI
                     ARYGITQPAAIGARLLQDADETPKPGSLPNTDFRLIATPMMALRAAAALARDLGLTPV
                     ILGDALEGEAHEMGIVHAGIARSIQSHGEPALSPAVLLSGGETTVTIGSKPSGRGGRN
                     TTFLLGLALALEGRAGIWGIAGDTDGIDGLDDVAGAMLAPDTLTRVRASGIDPRGMLA
                     AHDSHRLFDAV"
     gene            1296..1607
                     /locus_tag="VHX39_33175"
     CDS             1296..1607
                     /locus_tag="VHX39_33175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1244 domain-containing protein"
                     /protein_id="HEX3996049.1"
                     /translation="MPAPETAAPTDTELEAAAFRRLVQHLRERTDVQNIDLMNLAGFC
                     RNCLSRWYREAAESKGLGLTDPEAREIVYGMPYKEWQAKYQKEATPEQKAALAKSNPG
                     H"
BASE COUNT          317 a          534 c          511 g          256 t
ORIGIN      
        1 actgcgtcga acaaccggtg actgtcatgg gcggcgagca tgccgcgcgg gtcaataccg
       61 ctcgcccgga ccctggtcag cgtgtctggc gccaacatgg ctccggcaac gtcgtccaat
      121 ccgtcgatcc catcggtgtc accggcaata ccccagatgc ccgcgcgccc ctcaagggca
      181 agcgcgaggc caagcaagaa cgtcgtattg cggccgccgc gaccggatgg cttcgatccg
      241 atcgtgacag tcgtctcgcc gcctgacagt aaaaccgccg gcgacagggc gggttcaccg
      301 tggctctgga tcgagcgagc gatgcctgca tgaacaatgc ccatctcgtg agcctcgcct
      361 tcgagcgcgt cgcccaaaat caccggcgtg aggcccaggt cgcgtgccaa cgcggcagct
      421 gcccgcaacg ccatcatcgg cgtcgcgatc aaacggaagt cggtatttgg caggctgccg
      481 ggtttggggg tttcgtcggc gtcctgcagc aaccgtgcgc cgatcgcagc gggttgcgtg
      541 attccatagc gcgcgatcag ggcccgcgcg tcggcaaagg tcgtcggatc tgggactgtc
      601 gggcctgatc cgatcacagc cggatcgtca cccggcacgt cgctgattgc caaggtcacc
      661 acccgggcgg gagacgccgc ggcagccagc cggccccctt tgatcgcgga aagatgcttc
      721 cggacggtat tcatctcgcc gatactggca ccactcgcca acaaggcccg attgatcgct
      781 tgcttgtcgt ccaaggtgag gccaggtgcc ggggcggcga gcaacgcaga ggcgccaccg
      841 gacatcagtg caatgacaag gtcctgtggg gtcagaccct ggacgagctg cagaagacgc
      901 cgcgcaccgc gttcgctatt ggcatcgggc accggatgtg acgcttcgat cacttcgatg
      961 cgacgggtcg gaaccgcgtg gccgtagcgg gtcaccaccg caccttccag tgcaacgtcc
     1021 ggccaggcgt cctccagggc tgcggccatg acagcggctg atttgccgcc accaaccacg
     1081 atgcagcgac cggcggccgg cttgtgaggc aaatgctccg ccagcacccg gcgcgggtcg
     1141 gaagcggcca ccgccgcgtc aaacaagcgg cgcaaagctg tgcgagctcg cgcgtcgtcc
     1201 caggtcatgg cttgctatct cccactggac gcggcgaaac tatggcggat cgtgaccgtc
     1261 gacaccaatt tagccgtgac gacaggagta ataccatgcc cgcacccgaa acagccgccc
     1321 ccaccgacac cgagttggaa gccgccgcat tccgccgcct ggttcagcac ttgcgcgagc
     1381 ggactgacgt ccagaatatc gacctgatga accttgccgg gttttgccga aattgcctca
     1441 gccgctggta tcgtgaggct gccgagtcga aagggctcgg gctgaccgat ccggaggcgc
     1501 gggaaatcgt ttacggcatg ccctacaagg aatggcaggc caaatatcag aaagaggcaa
     1561 cgccggaaca gaaggccgca ctggcgaagt ccaatcccgg tcattgaccc gaaacaaa
//
LOCUS       DATAVD010001733         8773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1653261, whole genome shotgun sequence.
ACCESSION   DATAVD010001733 DATAVD010000000
VERSION     DATAVD010001733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8773
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1653261"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..247
                     /locus_tag="VHX39_33180"
     CDS             <1..247
                     /locus_tag="VHX39_33180"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996050.1"
                     /translation="VAPNGDIFVVDTENHAIRLIDATTWMVRTIAGNGTAGPGVDGTP
                     ATHACLSRPHGAIVAADGSIYIGDSENHRVRKLTRAG"
     gene            261..1478
                     /locus_tag="VHX39_33185"
     CDS             261..1478
                     /locus_tag="VHX39_33185"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEX3996051.1"
                     /translation="MKNSANGIQTTHVGSLPRPDDVIELAGQRQAGGHVDPAAYQSRL
                     GEAVADVVRLQQELGVSIPGDGEFGKEMGQRVNYGAWWSYSFQRLGGLKLGTELYRIP
                     PKRSTHDHIALTSFGDRRDRALFSAAYGDPESGVSTNRGGPGMKLPVCIDKITYTGQE
                     AIATDIAHFKAGLASAGVDEGFMTSIAPGSASRIGNEYYKTEEELIFACADAMREEYK
                     AIIDAGLILQLDDPSIAENWDMVNPEPSIEAYRKFTMIRVEALNHAIKGLPQDRIRFH
                     LCWGSWHGPHVTDVPMRDIVDVMLAIKTQGYSFEAANVRHEHEWRVWNDIKLPSGKIL
                     IPGIVSHATNVVEHPQLVSDRIVRFANLVGRENVIASTDCGLGGRIHPNIAWAKLKIL
                     ALGAELATKQLWA"
     gene            complement(1482..2540)
                     /locus_tag="VHX39_33190"
     CDS             complement(1482..2540)
                     /locus_tag="VHX39_33190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine aldolase family protein"
                     /protein_id="HEX3996052.1"
                     /translation="MCHAPKRFDFSVPVRINLYSDTQSKPTPGMKRAMLDAELGDEQG
                     GSDPTVWQLCDRVAALLGKEAAVFLPSGTMCNQVAIATHCRPGDEILAHEGAHIQAAE
                     GGAPGAISGVLIKGLAGERGQFSAAALEDAIRPISRYSPPQRLVELEQTANKGGGACW
                     PVVAIREVAEAAHRHGMAVHMDGARLMNAAVALGVPASEIVADCDTVWLDFTKGLGAP
                     LGAVLAGTSDFIGQAWRWKQRLGGSMRQGGLNAAACVYALDHHIDRLAEDHANAALLA
                     RGMAQIPGITVEIPETNLVFFDTHGTGMTAAAFAGKLRQAGVMVSVSDTWRGRACLHL
                     DVTTAMVDEAVAIMRGVV"
     gene            2632..4152
                     /locus_tag="VHX39_33195"
     CDS             2632..4152
                     /locus_tag="VHX39_33195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3996053.1"
                     /translation="MLPLTQYTGYADAQQHFSGAALWELFDGDRDRLNITHECIDRWA
                     GDPSRVAIRIAYADGSDESLTFAALSEWSARFANWLNGVGVRPGDRVAIMLEPSLPFY
                     TALFGTMKQGAVAVPLFTLFGPDGVRLRVDDCHPSLLLTTSEVGPLPNTRVVTPDANF
                     MRDLQRFDTTFIPATAANDMALFQYTSGTTRDRPEAVKHTHRAVVVVAAAALYGTGVR
                     PGDRFFCPSSPAWGHGLWHGTLAPLALGVQTGTMSGRFDPERLLAALHDFQITNLSAA
                     ATHYRMMKNCSARYPVTLEKMSFTGEPVDSETLAFAEATFGTHLCSMYGTTEVGVLLA
                     DYPGAADHVRKAGALGKPLPGLKVEIQEPDGKPSEPGRIGEIKVWRHGSWFPTKDRGQ
                     IDSDGVFWHAGRADDVIISAGWTMGPAEIEDAIMQHPAIAEAAVIGVPDVTRGQVVKA
                     FIVPKHIPGPGLAEEIQNLVRNRLSQHEYPRQIEFVTELPKTPAGKVNRKMLRERT"
     gene            4149..5276
                     /locus_tag="VHX39_33200"
     CDS             4149..5276
                     /locus_tag="VHX39_33200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3996054.1"
                     /translation="MSLFPKITDQGIADLRRRIGVRIETTLEPWCHEATRDNIRHYAH
                     GIGDDNPLWCDPAYGPRTRWGNMVALPSFLFTTSRIISGYVGGLPGVHAMWAGADWTW
                     HKPVQRNDEISTEAWLKELIEHETRFAGRAVQQIYHVRFFNQHGDLVAEADSWCFRTD
                     RDAAREEGTKYTELKARPVRRYTETELADVYRHYHDETIRGGEARFWESVQVGDALPT
                     MVKGPMTVTGFIAYAQGWGGLYIRANKLAWKQIHLHPGLGIPNRFNIPDCPERVHWEP
                     EFALMVGAPGAYDYGPERCSWLTHQLTNWMGDDGFLRRATSKIRRHNPEGDVLLIKAS
                     VIRKFQDQSRHLVEIAQEARNQDDELSVVGTGIVELPSAGA"
     gene            5364..6407
                     /locus_tag="VHX39_33205"
     CDS             5364..6407
                     /locus_tag="VHX39_33205"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3996055.1"
                     /translation="MRVSNFLFPQSMTASDDARVIDETLREAKLTDDLGFDVIWLAEH
                     HFDGICAYVDPISFAAALATATHHAKIGFAVAQMALHHPIRMAEQISLIDHLSKGRLI
                     VGLGRGTAYNIYDYQGFGIDHTEAQARFEEAEAIMFEAWKGEAFEHHGEFFNLRLPAF
                     RPGPFTRPHPYVIRAAATEHGMLDIAKRGRPFMMNVQSNATTMQRMELYRETLRSIGQ
                     DAATIAANTDSCWAWRNVFVAETDAEAERIAVPAFHAMHAHRTAMRERVYQEQGVSIV
                     PMPAPGAVPPARMVLEHSLVCGSPATVAEKLSAVGKSGIGGLIMQFRLGPMSYNDTAS
                     SLTLFQEKVRPHL"
     gene            complement(6391..8007)
                     /locus_tag="VHX39_33210"
     CDS             complement(6391..8007)
                     /locus_tag="VHX39_33210"
                     /inference="COORDINATES: protein motif:HMM:NF004780.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX3996056.1"
                     /translation="MIRTPVLVVGGGPVGSTLALDLASRGIDVVVAERNPPGQIPGVK
                     CNHVAARTMEIFRRLGVAQIVRDTGLPADHANDIAFRTSATGVEFGRIMIPCRRDRYT
                     NKDGPDGYWPTPEPPHRINQIYLDPLLAGLARDHNRVRYINRLEVEGFTQSDDGVTAE
                     AVDHVTGERAIIQCDYLIGCDGPSSNIRHLIDARLTGDAFIGRTQSTYVRAPGLAERM
                     QAPRAWSTQVMNPRRSANMFAVDGRETWLIHNYLRDSETDFAAIDPDWCIRTIMGVDA
                     DFAYDVITRENWIGRRLLADRFRDRRAFICGDAAHLWVPSAGFGMNAGIADAMNLSWM
                     LAGVLHGWADPNILAAHEAERWPITEQVSKFAMSTSLSVARTRAEVPDDIEYNTATQS
                     EFGQAMQKMHTPQFCCGGLNFGYFYDRSPIIQYDGEAAPSYTMDQFMPATVPGCRTPH
                     IWLSGGESLYDAIGPDFSLIRFDRSVEVGGLVDAAAHRRLPLRVIDVAPAEVYRHKLL
                     LSRPDQHVAWRGDAVPDNPRSLVDKIRGAA"
     gene            complement(8004..>8773)
                     /locus_tag="VHX39_33215"
     CDS             complement(8004..>8773)
                     /locus_tag="VHX39_33215"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX3996057.1"
                     /translation="IGEDPLFTRLPMRGFPSDLTITATSLSVLEALEAALGSRSVPHA
                     AERSPRLRARSDGLRKAWREEAERAGNANTITLPWLNHCLRDIVDADTIVINEYSFRQ
                     EYCPLETPGGFFGVSSAGGLGWGFPASLGAKLGSPGKLVLSVLGDGAYMFANPVACHY
                     VAQMQKLPVLTVIYNNALYGAVRRATLDMYAHGVASEADGRFLADLPAPSFEKIVAAH
                     DGYGERVERPADLPAAFRRAREAVRNGQQALVNVICP"
BASE COUNT         1818 a         2708 c         2586 g         1661 t
ORIGIN      
        1 cgtcgcgccg aacggcgaca tcttcgttgt agataccgaa aatcatgcca ttcgcctgat
       61 cgatgccaca acgtggatgg tacgcactat cgccggcaat ggcaccgccg gtccgggagt
      121 cgatggaact ccagcaacgc atgcttgcct ttcccgtccg catggtgcca tcgttgccgc
      181 ggacggctcg atctacatcg gcgacagtga gaaccatcgc gttcgcaaac taacccgcgc
      241 cggctgacag gagcgacgcc gtgaaaaaca gtgccaatgg cattcagaca acccatgtcg
      301 gcagcctgcc gcgtccggac gatgtgatcg aactggcggg ccagcggcag gcgggcggac
      361 acgtcgatcc agccgcttac cagtcccgtc tcggcgaagc ggtcgctgac gtcgtccggt
      421 tgcagcagga acttggcgtc agcatcccgg gggacggcga gttcggcaaa gaaatgggcc
      481 aacgggtcaa ttacggcgcc tggtggagtt attcctttca acgtctcggc ggcctgaaac
      541 ttggaacgga actatatcga attcccccga aacgctcgac ccatgaccac atcgcactga
      601 ccagtttcgg cgaccggcgg gaccgcgcct tgttcagtgc tgcctacggc gacccggagt
      661 ccggtgtctc caccaaccgc ggcgggccgg gcatgaaatt gcccgtctgc atcgacaaga
      721 tcacttacac cggccaggaa gccatcgcca ccgacatcgc ccatttcaag gctggcctcg
      781 cctcagcagg cgtcgatgaa ggtttcatga cctcgatcgc acctggcagc gcgtcacgga
      841 tcggcaacga gtactacaag accgaagaag agctgatttt cgcctgcgcc gatgccatgc
      901 gggaagaata caaggcaatc atagatgccg gtctgatcct gcaactcgac gatccgtcga
      961 tcgccgagaa ttgggatatg gtaaaccccg aaccttcaat cgaggcgtat cgaaagttca
     1021 ccatgatccg ggtcgaggcc ttgaaccacg cgatcaaagg gctgccgcag gatcgcatcc
     1081 gtttccactt gtgctggggc agttggcatg gcccgcacgt taccgacgtt cccatgcgcg
     1141 acatcgtcga cgtcatgctg gcgatcaaaa cccagggata ttcgttcgaa gcggcgaatg
     1201 tccgacatga acatgaatgg cgggtttgga atgacatcaa gttgccttcc ggcaaaattc
     1261 tcatcccggg cattgtcagc cacgccacca atgtcgttga acatccgcaa ttggtgtctg
     1321 accggattgt tcgctttgcc aacctcgtcg gccgcgagaa cgtcatcgcc tccaccgact
     1381 gcggactcgg cggacgcatt caccccaaca tcgcctgggc gaaactcaag atattggcgc
     1441 tgggtgcgga acttgcaacg aaacagttgt gggcataaaa gttagaccac gccccgcatg
     1501 atcgcgaccg cttcgtcgac catcgccgtc gttacatcga ggtgcaaaca ggcgcgcccg
     1561 cgccaggtgt ccgaaactga caccatcacg ccggcctgac gcaacttgcc cgcaaacgcc
     1621 gccgcagtca ttcctgtgcc atgcgtgtcg aagaacacca ggttggtttc cggtatctcc
     1681 acggtaatcc cgggaatctg cgccatgcct cgcgccagca gggctgcgtt cgcgtgatcc
     1741 tcggccagac ggtcgatatg atggtccagc gcatagacac aggccgcggc attcaggcca
     1801 ccctgacgca tcgacccgcc caaccgctgt ttccatcgcc acgcctgccc aatgaagtcg
     1861 gatgtgcccg ccaacaccgc acccagaggg gcgccaagtc ccttggtgaa atccagccaa
     1921 accgtatcgc aatcggcaac aatctccgag gccggcacac ccagcgccac cgctgcgttc
     1981 atcagcctcg cgccatccat gtgaactgcc atgccgtgac gatgtgccgc ctcggccacc
     2041 tcgcggatcg ccacaaccgg ccagcaggca ccaccgcctt tattcgcggt ttgctcgagt
     2101 tcaaccaatc gttgcggcgg ggaatagcgc gagatcggcc ggatcgcatc ctccaacgcc
     2161 gcagcggaaa actgaccacg ttcaccagcc agccccttga tcagcacacc actgattgca
     2221 cctggcgcac caccttcggc agcctggata tgcgcaccct catgcgcgag gatttcgtcg
     2281 cctggccgac aatgcgtggc aatcgccacc tggttacaca tcgtgccgct tggcaaaaac
     2341 accgcagcct ccttgccgag caaggccgcg acgcgatcgc ataactgcca aacggtcggg
     2401 tccgagcctc cctgctcatc gcccaattcg gcgtccagca tcgcccgctt catgcccggt
     2461 gttggtttcg attgcgtgtc ggaatacagg ttgatccgca cgggaacgga gaagtcaaaa
     2521 cgcttcggtg cgtggcacat tgtctggtca ctccggcggt cagcggcgac gcacaataca
     2581 taggatttgc tgttgcttga caaccagggg agcgtcacgc agtgctgccc catgcttccg
     2641 ctaacccaat acacgggcta cgccgacgct cagcagcatt tcagtggtgc cgcgctttgg
     2701 gagctgttcg atggcgaccg cgatcggctg aacatcacgc acgagtgcat cgaccggtgg
     2761 gccggcgatc catcgcgcgt ggctattcgg atcgcctatg ccgatggctc cgacgagtca
     2821 ctgacttttg ccgctctgtc cgagtggtcg gcgcggttcg cgaactggtt gaacggcgtc
     2881 ggagtgaggc caggcgaccg tgtggcgatc atgctggaac cgtcgttgcc attctacacg
     2941 gcactgttcg gcacgatgaa acaaggcgcg gtcgcggtgc cgctgttcac tttgttcggg
     3001 cccgacggcg ttcgtttgcg cgtcgacgac tgccatccgt cgttgctgct gacgacttcc
     3061 gaggtcggcc cattgcccaa cacgcgtgtg gtcacgcccg atgccaattt catgcgggac
     3121 ctgcaacgct tcgataccac cttcatcccg gcaaccgccg ccaacgatat ggcattgttt
     3181 caatacacct ccggcacaac gcgcgatcgg cctgaggcgg tcaaacacac acatcgagcg
     3241 gtcgtcgtgg ttgctgccgc ggcgctgtac gggaccggcg tgcggccagg cgaccggttc
     3301 ttctgcccgt catctccggc ctggggacat gggttatggc atgggaccct cgcgcctctc
     3361 gcgcttggcg tgcaaaccgg aacgatgtcc ggacgcttcg atccggagcg tctgttggcc
     3421 gcgttgcacg acttccagat caccaacctt tccgccgcag cgacgcatta tcggatgatg
     3481 aagaattgca gtgcacgcta tccggtcaca ttggaaaaaa tgagtttcac aggcgaaccg
     3541 gtggacagtg aaaccttggc attcgccgag gcaactttcg gtacgcattt gtgcagcatg
     3601 tacggcacca ccgaggtcgg cgtactcctg gccgattacc caggcgcggc cgaccatgtt
     3661 cgcaaggctg gagccctcgg caagccgtta cccgggttaa aagttgaaat ccaggaaccg
     3721 gacggcaaac cgagcgagcc aggccgcatc ggcgagatca aggtatggcg ccatggatcc
     3781 tggttcccga ccaaagatcg tggtcagatc gacagcgacg gagttttctg gcacgccggg
     3841 cgagccgatg atgtcatcat ctccgccggt tggaccatgg gacctgcgga aatcgaagac
     3901 gcgatcatgc aacatccggc gatcgcggag gcagccgtga tcggcgtgcc tgacgtcacc
     3961 cgtggccagg tcgtaaaggc cttcatcgtg ccgaagcaca ttcctggacc cggtctggca
     4021 gaggaaatcc agaacctggt gcggaatcgg ctcagtcagc acgaatatcc gagacaaatt
     4081 gaatttgtta ccgagctgcc gaagactccg gccggcaagg tcaatcgcaa aatgctgcga
     4141 gagagaacat gagcctgttt ccaaaaatca ccgaccaggg catcgccgac ctgcgccgtc
     4201 gcatcggcgt ccgtatcgaa acgacgctcg agccatggtg ccacgaagca actcgcgaca
     4261 atatccgcca ttacgcacac ggtatcggcg atgacaatcc gctgtggtgc gatccggctt
     4321 atggccctcg aactcgatgg ggcaacatgg tcgcactgcc gagttttctg ttcacgacga
     4381 gccggatcat ttcgggttac gtcggtgggc tgcctggcgt gcacgccatg tgggccggtg
     4441 ccgactggac ctggcataag ccggtgcaac gcaatgacga aatatccacc gaggcctggc
     4501 tcaaggagct gattgagcac gaaacccgtt tcgccggccg cgccgtgcag cagatttatc
     4561 acgtgcgctt cttcaatcag cacggcgacc tggtcgccga ggccgacagt tggtgcttcc
     4621 gcaccgaccg agacgccgct cgcgaggaag gcaccaaata caccgaactg aaagccaggc
     4681 cagtccgccg ttataccgag acagaactgg ccgatgttta ccgacattac catgacgaaa
     4741 cgatcagggg tggggaagcg cgattctggg agtctgtcca ggtcggcgac gctttgccga
     4801 ccatggtcaa aggaccgatg acggtcaccg gcttcattgc gtatgcacaa ggatggggcg
     4861 gtttgtatat ccgcgccaac aagctcgcct ggaagcaaat tcatttgcat cccggtctgg
     4921 gtatcccgaa ccgctttaac attcccgact gccccgagcg ggtgcattgg gaaccggaat
     4981 tcgctttgat ggtcggggca cccggcgctt acgactacgg ccccgagcgt tgctcgtggt
     5041 tgacacatca actcaccaac tggatgggtg atgatgggtt tctgcgccgt gccaccagca
     5101 aaatccgccg tcataatccg gaaggtgatg tgttgttgat caaagcttca gtgatccgca
     5161 aatttcagga ccagagccgc catttggtcg aaatcgccca ggaggcccgc aatcaggacg
     5221 atgagttatc ggtagtcggg actggaattg tggaactgcc gtccgccggg gcatgacgcg
     5281 ggaagcgcga ggaggtctga acgaggcgct cgcctgacgg cgctagcgca ggcatactga
     5341 gggttcccag gaagggccca accatgcgcg tttccaactt tctgttcccg cagagcatga
     5401 ccgcctccga cgatgccaga gtgatcgatg aaaccttgcg cgaggcaaag ctgaccgatg
     5461 accttggttt cgacgtaatc tggctggcgg agcatcactt cgatggcatt tgtgcctatg
     5521 tcgatccgat cagtttcgca gccgcactgg ccactgccac gcatcacgca aagatcgggt
     5581 tcgcagttgc acagatggca ttgcaccacc cgatccgcat ggccgaacag atttcgctga
     5641 tcgaccacct gtcgaaaggc cggttgatcg ttgggctcgg ccgaggcaca gcttataaca
     5701 tttatgacta tcaaggtttt gggatcgatc acacggaggc acaggcgcgg ttcgaagaag
     5761 cggaagcgat catgttcgag gcctggaaag gcgaagcatt cgagcatcac ggagagtttt
     5821 ttaacttgcg gctgccggcg tttcggccgg ggccgtttac caggccgcac ccatacgtca
     5881 ttcgcgccgc ggcgaccgag catgggatgc tggacatcgc caaacgtggc cggccattca
     5941 tgatgaatgt gcaaagcaat gcgaccacga tgcagcggat ggagctatat cgggaaacgt
     6001 tacgctccat tggtcaggat gcggcgacaa tcgccgccaa caccgattcc tgctgggcct
     6061 ggcgcaatgt tttcgtggcc gagacggatg ccgaggcgga acggatcgcc gtgccggcgt
     6121 tccatgccat gcacgcccac cgaacggcga tgcgcgagcg cgtctatcag gaacagggcg
     6181 tgtccatcgt tccgatgccg gctccgggag ctgtgcctcc cgcgcgcatg gtgctggaac
     6241 attcgttggt ttgcggatcg ccggccacgg ttgccgagaa actgtccgcg gtcggcaaat
     6301 ccggtatcgg tgggttgatc atgcagttcc gattgggccc gatgtcctac aacgacaccg
     6361 ccagcagtct gacattgttc caggaaaagg tcaggccgca cctctgattt tgtccaccag
     6421 gctccgagga ttgtccggca cggcatcgcc gcgccacgca acgtgctggt cgggacggga
     6481 aagcaaaagt ttgtgccggt agacttcagc cggtgcgacg tcgatcacgc gcagcggcag
     6541 cctgcggtgc gcggcggcgt cgaccagccc gccaacctca acggagcggt cgaagcgtat
     6601 caaactgaag tcgggaccga ttgcgtcgta cagcgactcg ccaccggaca gccagatatg
     6661 cggcgttctg cacccgggca ccgttgccgg catgaactga tccatcgtgt aggagggtgc
     6721 ggcttctccg tcgtactgaa taattggcga gcggtcgtag aaatagccga aattcaaacc
     6781 accacagcag aattgcggcg tatgcatttt ctgcatggcc tgaccgaatt ccgactgggt
     6841 cgccgtgttg tactcgatat catccggcac ttcggctcgc gttcgcgcga ccgaaagcga
     6901 cgtgctcatg gcaaatttcg agacttgttc cgtgatcggc caacgctccg cctcgtgtgc
     6961 agcgagaata ttgggatcgg cccaaccgtg cagcacgccg gccagcatcc aggacaaatt
     7021 catcgcgtca gcgataccgg cgttcatccc gaagccggcc gacggcaccc aaagatgcgc
     7081 cgcatcgcca cagatgaatg cccgacgatc gcggaaccgg tcggcgagta agcggcggcc
     7141 gatccagttt tctcgcgtga tcacgtcata agcgaagtca gcatcaacac ccatgatggt
     7201 gcggatacac cagtcggggt caatcgcggc aaaatcggtc tccgaatccc gtagatagtt
     7261 gtggatcagc caggtttccc tgccatcaac cgcaaacata tttgcgctgc gacgagggtt
     7321 catcacctgg gttgaccagg cacgcggcgc ctgcattcgc tccgcaaggc ccggcgcccg
     7381 gacataggtc gattgcgtcc ggccaataaa cgcatcgccg gtcagacgcg cgtcgatcaa
     7441 atgccttatg tttgacgatg gtccatcgca accaatcagg taatcgcact ggatgatggc
     7501 gcgctcaccg gtgacgtggt ccaccgcttc cgccgtgacg ccatcgtcgg attgtgtgaa
     7561 tccctccact tccagccggt tgatataacg aacccggtta tgatccctgg cgaggccagc
     7621 cagcaatgga tcgagataaa tctggttgat gcgatgcggc ggctccggcg tcggccaata
     7681 tccgtcgggc ccatctttgt tggtgtagcg atcacggcgg caggggatca tgatgcggcc
     7741 aaactcaacc ccggtcgccg aggtgcggaa tgcaatatcg ttggcgtgat cggctggtag
     7801 tcccgtatcg cgtacgatct gggctactcc caaccggcga aagatctcca tcgtgcgcgc
     7861 cgcgacgtgg ttgcacttaa cgcctggtat ctgacccgga ggattgcgtt ccgcaaccac
     7921 gacatcgatg ccgcgtgacg caagatccag tgcgagcgtc gacccgacgg gtccgccgcc
     7981 aaccacgagg accggtgtgc ggatcacgga catatcacgt tgaccaacgc ctgctggccg
     8041 ttacgtacgg cctccctcgc gcgccggaag gccgcgggca ggtcggcggg gcgttcgacc
     8101 cgttcaccgt aaccgtcatg cgcggcaacg atcttttcaa acgacggtgc cggcaggtcg
     8161 gcaaggaatc gtccgtcagc ctcggacgcg accccatgcg cgtacatgtc cagtgtcgct
     8221 cgccgcactg cgccgtacaa ggcgttgttg tagatcacgg tcaaaaccgg cagcttctgc
     8281 atttgcgcga cgtaatgaca ggccaccgga ttagcaaaca tgtaggcgcc atcgcccagt
     8341 accgacagca cgagtttacc gggtgacccc agtttggcac caagtgaagc cgggaacccc
     8401 cagccgagac cgcccgcgga actaacgcca aagaacccgc caggtgtttc gaggggacaa
     8461 tactcttgcc ggaacgaata ctcgttgatt acgatggtgt ctgcatcaac gatgtctcgc
     8521 aggcagtggt tcagccaggg caacgtgatg gtgttggcat tgccggcgcg ttctgcctcc
     8581 tcacgccagg ctttccgcaa tccatccgag cgtgcccgca accgtgggct acgttcggcg
     8641 gcatgcggca cggaacgaga accgagagcg gcttccagcg cctccaacac ggacagtgag
     8701 gtcgcggtta tggtcagatc cgatgggaaa cctcgcatcg gtagcctggt gaacaacggg
     8761 tcttcgccaa ttt
//
LOCUS       DATAVD010001734         1602 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3324440, whole genome shotgun sequence.
ACCESSION   DATAVD010001734 DATAVD010000000
VERSION     DATAVD010001734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3324440"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..799)
                     /locus_tag="VHX39_33220"
     CDS             complement(<1..799)
                     /locus_tag="VHX39_33220"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEX3996058.1"
                     /translation="MDTEPNAVAATPVAADLLGAIGNTPLIKLRRASAATGCTILGKA
                     EFMNPGGSVKDRAGLAIILDAERRGVLKPGGTVVEGTAGNTGIGLTLVGNARGYKTVI
                     VMPETQSREKIDFLRMIGADLRLIPAKPYKDPGNYVHYSRRLAEELGAVWADQFDNLA
                     NREGHRLTTGPEIWHQTAGQVDAFTCACGTGGTLAGVSLALKQRNPAVSIVLADPEGS
                     ALYGWIKSNDLSMTGSSITEGIGQSRVPGNLEGVGIDDAVRIPDAEAL"
     gene            complement(831..>1602)
                     /locus_tag="VHX39_33225"
     CDS             complement(831..>1602)
                     /locus_tag="VHX39_33225"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEX3996059.1"
                     /translation="VADGDRLGIEGLSLDVLYTPGHTDDSYSFVVDDRVFTGDTLLIR
                     GTGRTDFQNGDARTQYESLQRLLRLPDETLVFPGHDYKGDTVTTVGEERRCNPRLQVK
                     SADDYVALMAGLNLSNPKMMDVAVPANVRQGLMQANIARRGWAVTAEAAAKLIGTPGV
                     VLIDLRERGERDKHGQIGGSVHVPYPELQRSIGAGGLLHELAAATGKRLLFYCAFGER
                     SAMAVQAAQDAGLSTACHIEGGMGAWTKALRHNLPAPV"
BASE COUNT          250 a          525 c          523 g          304 t
ORIGIN      
        1 ccagcgcctc ggcgtcgggg atgcgcaccg cgtcatcgat ccccacaccc tccaggttgc
       61 ccggcacgcg ggactggccg atgccttcgg tgatggagga acctgtcatg ctgagatcgt
      121 tactcttgat ccagccgtac aacgcgctgc cctcgggatc ggcgaggacg atgctgacag
      181 cgggattgcg ctgcttcagt gccaggctga cgccggcgag cgtgccgccg gtgccacagg
      241 cacaggtaaa cgcatccacc tgcccggccg tctggtgcca gatctcgggg ccggtggtca
      301 ggcggtgacc ctcgcggttg gcgaggttgt cgaactggtc ggcccacacc gcacccagtt
      361 cctcggcgag cctgcgggag taatgtacgt agttaccggg gtccttgtaa ggcttggccg
      421 ggatcagccg caggtcggcg ccgatcatgc gtaaaaagtc gattttctcc cgcgactgcg
      481 tctccggcat cacgatgacg gtcttgtagc cgcgcgcgtt gccgaccagc gtcaggccga
      541 tgccggtgtt gccggcggtg ccctccacca ccgtgccgcc gggcttgagc acgccgcgcc
      601 gctcagcgtc caggatgatg gctagccctg cgcggtcctt taccgatccg ccggggttca
      661 tgaactcggc cttgcccagg atcgtgcaac cggtggcagc cgaggcgcga cgcagcttga
      721 tcagtggcgt gttgccgatc gcgccgagaa ggtcggcggc gaccggtgtg gccgcgacgg
      781 catttggctc ggtgtccatt gtcaggtggg ctccttgagg cggattgtgt ttataccggc
      841 gcgggcaggt tgtgccggag tgctttggtc caggccccca tgccgccctc gatatggcag
      901 gcggtcgaga ggccggcgtc ttgtgcggcc tgcacggcca tggcactgcg ctcgccgaac
      961 gcacagtaga acagcagccg cttgccggtc gccgctgcca gttcgtgcaa cagaccgccc
     1021 gcgccgatgc ttctctgtaa ttccgggtac ggcacatgca ccgaccctcc gatttggcca
     1081 tgcttgtcac gctcgccgcg ttcgcgcagg tcgatcagca ccacgccggg tgtgccgatg
     1141 agcttggctg ccgcctccgc cgtcaccgcc cagccacgcc gagcaatgtt tgcttgcatc
     1201 aggccttggc ggacgttggc gggcaccgcg acgtccatca tcttcgggtt cgaaaggtta
     1261 aggccggcca tcagcgccac gtagtcgtcc gcgcttttga cctgcaaacg cgggttgcag
     1321 cggcgttctt caccaacagt ggttactgtg tcgcccttgt agtcgtgccc ggggaacacc
     1381 agcgtttcgt ccggcagccg cagcagacgt tgcaggcttt cgtattgcgt ccgcgcgtcg
     1441 ccattctgaa aatcggtgcg cccggtgccc cgaatgagta gcgtatcacc ggtaaaaacg
     1501 cgatcatcca caacgaacga ataggaatcg tcggtgtggc cgggcgtgta gagcacgtcg
     1561 agcgacagcc cctcgatccc aagccgatca ccgtcggcaa cg
//
LOCUS       DATAVD010001735         2332 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3515062, whole genome shotgun sequence.
ACCESSION   DATAVD010001735 DATAVD010000000
VERSION     DATAVD010001735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2332
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3515062"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            65..262
                     /locus_tag="VHX39_33230"
     CDS             65..262
                     /locus_tag="VHX39_33230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996060.1"
                     /translation="MASTPTLSREAMADIMRRHGLLHIDDALIKRAHDLHVKSADALA
                     RLPRDFAKSVEPTHIFTVPLR"
     gene            294..1907
                     /locus_tag="VHX39_33235"
     CDS             294..1907
                     /locus_tag="VHX39_33235"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3996061.1"
                     /translation="MTEVDRRTAVAMIAGVALAGPEVAVAKDETVLRIGMTLADIPLT
                     TSQPNQGAEGWRFIGVTLYDGLVNWDLTSADKPSGLIPGLATEWGADPSNRRRWTFKL
                     RQGVKFHDGTPWNADAAMWNLDKLIKKDAPQYDAAQVAQVFGRFNAVTSYKKIDDYTI
                     EMTTKDPDSMIPYYFGRVFFASPAQWEKVGRNWAEFAKAPAGTGPWKLDKLVPRDRAE
                     LVKNTEYWDKNRIPKTDRLVLVPIPDAVARTSALLSGQVDWVEAPAPDMLPRLKQAGL
                     KVVTNSYPHTWPWWFSQLPDSPFKDIRVRKAANLAIERKGIVDQLLAGLAKPAVGQVW
                     PGHKWFGKPTFDIKYDPEQAKKLLAEAGYSKQNPVKAKILITAAGSGQMQPLPMNQAM
                     QENLRDVGIEVEFEVIEWNTMTERRAAGAAAPEAKGIHAINNSWAWWDPDFGMLILLD
                     SRRIAPKGSNWMNLRDPAVDAICDQIRNEFDQDKQDALIAKLHEKFVDEAAWLFVVHD
                     LNPRAMTNKVKGFVQAQHWIQDLTTITMG"
BASE COUNT          516 a          696 c          713 g          407 t
ORIGIN      
        1 ctgttgccgg cgaacggcgc accgatgaca cgcagatcgt cggaatttcc acaggagata
       61 cgcgatggct tcaactccga cactctctcg cgaggccatg gcggatatca tgcggcgcca
      121 cggcctcttg cacatcgatg atgcgctgat caaacgcgcc cacgatctgc atgtgaagag
      181 cgccgatgca ctggcgcgcc tgccgcgcga tttcgccaag agcgtggagc cgacacatat
      241 cttcacggtt ccgcttcgtt agcaaaataa atcgtgggtg ggaggaaaat gtcatgaccg
      301 aagtcgatcg ccggaccgcg gtagcgatga tcgccggcgt cgcgcttgcg ggcccggaag
      361 tggccgttgc gaaagatgaa acggtgctgc gcatcggcat gacgcttgcc gacattccac
      421 taaccaccag ccagccgaac cagggcgcgg aaggatggcg cttcatcggc gtcacgctct
      481 acgacgggct cgtcaattgg gacctgacgt cagcggacaa gccgagcgga ctcattcctg
      541 gcctcgcaac cgaatggggt gctgatccgt cgaaccgccg gcggtggaca ttcaagctgc
      601 gtcagggcgt taaattccat gacggcacgc cgtggaacgc cgacgccgcg atgtggaatc
      661 tcgacaagct catcaaaaag gacgcgccgc agtacgacgc cgcccaagtc gcgcaggtgt
      721 tcgggcgctt caacgccgtc accagctata agaagatcga tgactacacg atcgagatga
      781 cgaccaaaga tcccgattcg atgatcccgt attatttcgg ccgcgtcttc tttgcgagcc
      841 cggcgcagtg ggagaaggtc ggtcgcaatt gggccgagtt cgccaaggcg cccgccggta
      901 cggggccgtg gaagctcgac aagctcgtcc cgcgcgatcg cgccgaactg gtgaagaaca
      961 ccgaatattg ggacaagaat cgaatcccga agaccgaccg cttggtgctc gttccgattc
     1021 cggatgcggt tgcgcgcacg tcagcgctgc tatccggaca ggtcgattgg gtagaagcgc
     1081 cagcgcccga catgctgccg cggctcaagc aggccggcct caaggtcgtg accaacagtt
     1141 atccgcacac ttggccgtgg tggttcagcc aacttcccga ctcgccgttc aaggacatcc
     1201 gggtccgcaa agccgcaaac cttgcgatcg aacggaaagg cattgttgat caactactcg
     1261 ccgggcttgc gaagcccgcc gttggccagg tctggccggg ccacaaatgg ttcggcaaac
     1321 cgacgttcga catcaaatac gatcccgaac aggccaagaa gctactggcg gaggccggat
     1381 attccaagca gaatccggtc aaggccaaga tcctgatcac cgccgccggc tccggacaga
     1441 tgcagccgct gccgatgaac caggcaatgc aggagaacct gcgcgacgtc ggaatcgaag
     1501 tggaatttga ggtcatcgag tggaacacga tgacggagcg ccgcgcggcc ggcgccgcag
     1561 caccggaagc caagggcatc cacgcgatca acaatagctg ggcatggtgg gaccccgact
     1621 tcggaatgct gatcctgctg gacagccggc ggatcgcccc gaagggcagc aactggatga
     1681 acttacgcga tccggccgtg gacgcgatct gcgatcaaat tcgcaacgag ttcgatcagg
     1741 acaagcagga cgctctcatc gccaagctgc acgagaagtt cgtcgacgag gccgcgtggc
     1801 tatttgtcgt gcatgatctc aatccgcgcg ccatgacgaa caaggtcaaa ggattcgttc
     1861 aagcgcagca ctggattcaa gatctgacaa cgatcaccat gggctgatgg gatcaaccgc
     1921 tttgctggtc aaagcatcaa ggggcaggat gctcgcggag aaccgatcgg caggagaaca
     1981 aagacccttt ggagtgcgcc cgtcgtggaa ctgaaacgtc tagcgattct gcgcgagcgt
     2041 cctgccgatc atcgatgccg tcgacagtcg ggagcgatca ccctcgcggc tatcaccgct
     2101 ctgactcact tttgatgaag ttcgtgcgcc ggctcgtgtt ggtttcacaa aggaatcagg
     2161 atgatacagc gagcccttcg tcccgcggcc ttaattccag ttggatttgc cgtggagagc
     2221 gccgtctgtg acggctccgc ggttgcgatc accatccgcc cgatgaggga cacgggcgta
     2281 gaaggcaatc gcctcggccg ccttatccac atagaggtgc gggatgaccg cg
//
LOCUS       DATAVD010001736         2068 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1838229, whole genome shotgun sequence.
ACCESSION   DATAVD010001736 DATAVD010000000
VERSION     DATAVD010001736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2068
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1838229"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..582
                     /locus_tag="VHX39_33240"
     CDS             <1..582
                     /locus_tag="VHX39_33240"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3996062.1"
                     /translation="REQDLTRLRQRFGVVLQDPFLFSGTVADNIRLGNENITDDAMQL
                     AAEQVNVDDFIRTLPGRYQEPLRERGAGLSTGQKQLINFARALAHRPGILILDEATSS
                     VDTDTEFLVRAALERMVEGRTSVVIAHRLSTVQRADVILVMHRGQLREIGSHQQLLAL
                     HGIYWKLYQLQYKDQELAEPAAGLTPSLAVGTD"
     gene            complement(522..974)
                     /locus_tag="VHX39_33245"
     CDS             complement(522..974)
                     /locus_tag="VHX39_33245"
                     /inference="COORDINATES: protein motif:HMM:NF025445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4260 domain-containing protein"
                     /protein_id="HEX3996063.1"
                     /translation="MLARPDRILRIEGTCALVASVSGYFLFLHGHWGLFAVLILAPDL
                     SLLGYATKNLRFAANLYNLAHNYALPVILGLIAWKWNSPFSAEIAAIWVAHIGMDRML
                     GFGLKYPQAFKPTHLQTVAVFRTYELRRGQSVPTASEGVRPAAGSASS"
     gene            1039..>2068
                     /gene="lpxB"
                     /locus_tag="VHX39_33250"
     CDS             1039..>2068
                     /gene="lpxB"
                     /locus_tag="VHX39_33250"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: protein motif:HMM:TIGR00215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEX3996064.1"
                     /translation="MKSSGPPKIFLSAGEASGEHYGTLVIAALQQLLPDADFFGLGGR
                     RMEALGFRPIVRSEDVAVMGITEVVRHMPRIYREYRRLRASIAAEKPDIAILIDFPDV
                     NLSLARHLKAQNVPVIYFVSPQLWAWKKYRIRSVQRYVDRMLTIFPFEERFYHDHGVD
                     AEFVGHPLAELGPPKLNRDEFARQLGIDPSKIWVGLLPGSRGKEIRLNLPDMVRAASM
                     LVSQSERPSGLQFLLPLASTLTQPQCDHIQGLLADLLAAQSGPPRIAITDDARAVLCH
                     ARASIVASGTATVEAALIGNPFIVVYRISPLSYAVAKRVVDVPHVAMVNLIAGKRIVP
                     ELIQGDFTP"
BASE COUNT          405 a          701 c          585 g          377 t
ORIGIN      
        1 cgggagcagg atctgacccg tctccgccag cggttcggcg tggtcctgca ggacccgttc
       61 ctgttcagcg gcactgtcgc cgacaatatc cgcctcggca acgagaacat caccgatgat
      121 gccatgcagc tcgccgccga acaggtgaac gtcgacgact tcattcgcac gctgcctggc
      181 cgatatcagg aaccgcttcg cgagcgcggc gccggccttt ccaccgggca aaagcagctg
      241 atcaactttg cgcgcgctct ggctcaccgg cccggcatcc tgatcctcga cgaggcgacc
      301 tccagcgtcg acaccgacac cgaatttctc gtgcgtgccg ccctcgaacg catggtcgaa
      361 ggccgaacct cggtcgtgat cgcgcaccgg ctctccaccg tccagcgtgc cgacgtcatc
      421 ctcgtgatgc atcgcggcca gctgcgcgag atcggctccc accagcagct gctggcgctc
      481 catggcatct actggaagct ctaccagctc cagtacaagg atcaggaact ggctgaaccc
      541 gccgccggcc tcacgccctc gctggccgtg ggtacggact gaccgcgccg cagctcgtat
      601 gtccggaaaa ccgccaccgt ctgcaaatgc gtcggcttga atgcctgggg atacttcagc
      661 ccgaatccca gcatgcgatc catgccgata tgcgcgaccc agattgctgc aatctcggcg
      721 gaaaatggag aattccattt ccaggcgatc aatcccaaaa tcaccggcag cgcgtagtta
      781 tgggcaaggt tgtacagatt cgcggcgaaa cgcaggtttt tcgtggcgta tcccaggaga
      841 gacaggtcgg gtgcgaggat cagaaccgca aacaatcccc aatgcccgtg caggaacagg
      901 aagtaacccg atacgctcgc cacaagagcg caggttccct cgatgcgcag aattcgatcg
      961 ggtcgcgcta gcatgggatc aagagtagag acaggagaag agggtggcaa tgctccgcgc
     1021 ccacaacgcc ttgcagcgat gaagagcagc ggtccaccaa agattttttt atccgccgga
     1081 gaagccagcg gcgagcacta cggcacgctg gtgatcgcgg cattgcagca actgttgccg
     1141 gatgccgatt ttttcggcct cggcggccgc cgcatggaag ctctcggctt ccgccccatc
     1201 gtccgctctg aagatgtcgc cgtcatgggc atcaccgagg tcgtccgcca catgccccgc
     1261 atttaccgcg aataccgacg cctgcgcgcc tcgatcgctg cggaaaaacc ggacatcgcc
     1321 atcctcatcg actttcctga cgtcaatctc tccctggccc gccatctcaa agcgcaaaac
     1381 gtcccggtga tttatttcgt cagcccgcaa ctctgggcct ggaagaaata ccgtatccgc
     1441 agcgtgcagc ggtatgtcga ccgcatgctg accatctttc ccttcgaaga gcgcttctac
     1501 catgaccacg gcgtcgatgc ggaattcgtc gggcatcccc tggccgaact cggccccccc
     1561 aaactgaacc gcgacgaatt tgcgcgccaa ctgggaatcg atccgtcgaa aatctgggtg
     1621 ggtctgctcc cgggaagccg tggcaaggag attcggctca acctgcccga tatggtgcga
     1681 gcggcctcca tgctggtttc ccagtccgaa cgcccctccg gcctccagtt cctgctgcct
     1741 ctcgcgtcca ccctgaccca gcctcaatgc gaccacatcc agggcctgct cgccgatttg
     1801 ctggcggcgc agtccggccc gccgcggatc gcgatcaccg acgacgcccg cgccgtcctc
     1861 tgccacgccc gtgccagcat cgtggccagc ggaaccgcta ccgtcgaggc cgcgctcatc
     1921 ggcaacccat ttatcgtggt ataccggatt tcaccgctca gctatgcggt ggcgaagcgg
     1981 gtggtggacg tgccgcatgt ggccatggtg aacctgattg ccggaaaacg catcgtaccc
     2041 gaactgattc agggtgactt tacgccgg
//
LOCUS       DATAVD010001737         3325 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3515210, whole genome shotgun sequence.
ACCESSION   DATAVD010001737 DATAVD010000000
VERSION     DATAVD010001737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3325
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3515210"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            218..1102
                     /locus_tag="VHX39_33255"
     CDS             218..1102
                     /locus_tag="VHX39_33255"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX3996065.1"
                     /translation="MSGAALARRARLDALWPGIVAALSFSGVDILVKVVFASGMDVTT
                     MVALRGLIVLPVMYVWLRLRPPMFRHSPRQRWIAWGIGLLFAGTQYGLFMAISLLPVS
                     IAILAYFAYPLLTGIGGGITGIDRLRWPGLLTALTAFLGLSLMLGAEYRNLSGLGIIW
                     ALIAAALRTVSLLLTRAYLNGTDARVTTWYSMVPSTVLFLIAVIVAGEWHVPHSASGW
                     SAFAAAGICSTLSQLLVYVSTNRVGPFRTAFIMNLEPLVTTMLSLLLLQEVLTPTQSM
                     GAVVMLMSLGLFQLVRAR"
     gene            1109..2056
                     /locus_tag="VHX39_33260"
     CDS             1109..2056
                     /locus_tag="VHX39_33260"
                     /inference="COORDINATES: protein motif:HMM:NF021599.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2332 domain-containing protein"
                     /protein_id="HEX3996066.1"
                     /translation="MTEAIARHFRRFAETEAAGRSPLYEALCHGVAADPEILHFLAEL
                     PEPKQQPNLLLAAVRFVCGVQNNPADFRTALLTHRDKVRAQMLRRRTQTNEPARCASL
                     LPILAHLPGPLALLEVGASAGLCLLPDRYGYAYAGHVPFGPEPRFPCRADAATPVPAS
                     VPNVVWRAGIDLNPLDVRNDDDMAWLEALVWPDQPDRAARLCAAIAVAREDPPRIVAG
                     DLLTALPALAAEAPADATLVVFHTAVLAYVVDAAARAEFVRTVRDLPAVWISNEAPYL
                     FPDMVATPVRRGPFLLAVNGRHTAWTDPHGAWIDWVGVQ"
     gene            complement(2050..2625)
                     /locus_tag="VHX39_33265"
     CDS             complement(2050..2625)
                     /locus_tag="VHX39_33265"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEX3996067.1"
                     /translation="MIRLFYHQAFNVVWLVWAIYWCVAAIGTKRTRYRESVASRLLHI
                     VPLLLGIALLVSPRIAGRLLSQRFLPVSATWFFVGFALTILGLGFSVYARFWLGGNWS
                     GTVTLKDDHELIRGGPYNRVRHPIYTGILLAVLGSAIATGEWRGLFALALITAAFLRK
                     ITVEERVLTEQFGDAYRRFQAEVPALIPGIY"
     gene            2711..>3325
                     /locus_tag="VHX39_33270"
     CDS             2711..>3325
                     /locus_tag="VHX39_33270"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEX3996068.1"
                     /translation="MNQWRIGDVSITKVVELEVTGGSRFLLPQATPEAIKPISWLQPH
                     FADENGRLRMSIHTFLVQTPTHRIVVDTCLGNDKQNRRIPHWNNMQTRFLDDIAAAGF
                     GRDSIDTVLCTHLHVDHVGWNTMQRDGKWVPTFPNARYLFGRIEHEHWSSVSSREDMP
                     HVMADSVTPILDAGLATLVEYDHTIGAEISLLPTVGHTPGHVSVM"
BASE COUNT          585 a         1014 c         1031 g          695 t
ORIGIN      
        1 tccgtgctct gttccctaac gcccgtttcg tgagcgtgaa aaatgccggc cattggttgc
       61 atgccgataa tccggctggc ttcctgtccg tcgtggaagc gttcctccac gactggaaag
      121 gataaccgat gaatgccggg gtcagccgga ccgttacgcg ggcgttgcgt gacgtgcact
      181 tcgcgtgtgg cgtgacgacg tacgtgcagt tcgcacaatg agtggcgcgg cgctggcacg
      241 cagagcgcga ttggacgcgc tctggcctgg tatcgttgcg gcgttgtcat tcagcggcgt
      301 cgatattttg gtcaaggtcg tctttgcctc cggcatggat gtgacaacga tggtcgcgtt
      361 acgcggcctg atcgttttgc cggtgatgta cgtgtggttg cgtttgcgcc cgcccatgtt
      421 ccggcattcg cccaggcagc ggtggattgc atggggcatc ggcttgttgt tcgccggcac
      481 gcagtacggg ttgttcatgg cgatctcgct gctgccggtt tcgatcgcca tcctggcgta
      541 tttcgcttat ccgctgctga ccggcatcgg cggcggcatc accggtatcg accgactgcg
      601 ctggcctggg ctgctgaccg cgttgacagc gtttctgggg ctttccctga tgctgggcgc
      661 cgaatatcgc aatctttcgg gccttggcat catttgggcg ctgatcgcgg ccgccctgcg
      721 caccgtatcg ttgctgttga cccgcgctta cctgaacggc accgatgctc gcgtgacgac
      781 gtggtattcg atggtgccct cgacggtgct gttcctgatt gcggtcatcg ttgccggtga
      841 gtggcacgtg ccgcacagtg catccgggtg gagcgcattc gccgccgccg gcatctgcag
      901 taccttgtcg cagctgctgg tctatgtctc caccaatcgc gttggaccgt tccgtactgc
      961 gttcattatg aacctggaac ccttggtgac gaccatgctc agcctgttgt tgctgcagga
     1021 agtcctgacg ccaacccagt caatgggagc cgtcgtgatg cttatgtcct tgggcttatt
     1081 tcagcttgtc cgggcgcgct gaccggtcat gaccgaggcg attgccagac acttccgccg
     1141 tttcgccgaa accgaggcag ccggccgttc gccactctat gaggcactgt gccacggtgt
     1201 cgccgcggat cccgaaattc tgcattttct ggccgagctc cccgagccga agcaacagcc
     1261 caatctgtta ctcgcggcag ttcgtttcgt gtgcggcgtg cagaacaatc ctgcagactt
     1321 tcgcaccgcg ctgttgacgc atcgggacaa agtgcgcgca caaatgttgc gtcgccgcac
     1381 gcaaaccaac gagccggcgc gctgtgcgag cttgctgccc atcctggcgc acctccctgg
     1441 gccgctggca ttgctggagg ttggcgcctc ggccggtctt tgtttgctgc cggatcgtta
     1501 cggttacgcc tatgccggac atgttccatt cggacccgag ccgcggttcc cttgccgggc
     1561 agacgctgcg acgccggttc ctgcgtcggt tcccaatgtc gtgtggcggg ctggtatcga
     1621 tctcaatcca ctcgacgttc gcaacgacga cgacatggca tggctggaag cactggtctg
     1681 gccggatcaa ccggatcgcg cggcacggtt gtgtgcggcc atcgccgttg cccgcgagga
     1741 cccgcctcgc attgtcgccg gcgatttact gacagcgctg cccgcgcttg ccgccgaggc
     1801 accggcagac gcgacgttgg tcgtgttcca cacggcggtt ctggcttacg ttgtggatgc
     1861 ggcagcgcgt gcagaattcg tgcgcaccgt gcgggatttg cctgcggtgt ggatcagcaa
     1921 cgaagcgccg tacctgttcc ccgatatggt tgcaactccg gtacggcgcg gcccgttctt
     1981 gctggcggtc aacggcaggc acactgcctg gaccgatccg catggggcct ggatcgattg
     2041 ggtcggggtt caatagatgc cggggatcag cgccggtacc tcggcctgaa agcgccggta
     2101 ggcatcaccg aattgctcgg taagcacgcg ttcctcgacg gtgattttgc gtagaaacgc
     2161 ggccgtgatc agtgccagcg caaacaggcc gcgccattcg ccggtggcaa tcgcagagcc
     2221 cagtacggcg agcaggatgc cggtgtagat tggatgacgt accctgttat acggaccacc
     2281 tcggatcaat tcatgatcgt ctttcaaggt cacggtgccg ctccagttgc cgcccaacca
     2341 gaagcgggca taaacggaaa agcccaggcc gaggatggtg agagcaaaac ccacaaagaa
     2401 ccaggttgct gaaaccggca aaaaccgctg cgacagcaat cggcccgcaa tccgcggcga
     2461 caccagcagc gcaatcccca gaagcaacgg tacgatgtgc agcaggcgcg aggcgacaga
     2521 ttcccggtat cgcgtccgtt tcgtaccgat cgcggcgacg caccagtaga tcgcccagac
     2581 gagccacacc acgttgaacg cctgatggta aaacagacgg atcatgttgt cagggtgggt
     2641 tgtcgtcgtc gccattgcaa ggcgtgacag tgcggcgcgc ctgtgcaaac gtcggcgcag
     2701 gagacaatgg atgaaccagt ggcggatcgg tgatgtcagc atcaccaagg ttgtcgagct
     2761 cgaggtcacc ggcggcagcc gctttctgtt gccgcaggcc acgcccgagg cgatcaaacc
     2821 gatctcctgg ctgcaaccgc acttcgccga cgagaacgga aggttgcgca tgagcatcca
     2881 cacgttcctg gtgcaaacac caacgcatcg gattgtcgtc gacacctgcc tcggcaacga
     2941 caagcaaaat cgccgcatcc cacattggaa caatatgcaa acgaggtttc tggacgatat
     3001 cgccgctgcc ggctttggcc gcgactcgat cgacactgtg ctgtgcacgc atcttcatgt
     3061 cgaccacgtc ggctggaata ccatgcagcg cgacggcaaa tgggtgccga cgttcccaaa
     3121 tgcccgctat ttgttcggcc gtatcgaaca tgagcattgg tccagtgtgt cctcgcgtga
     3181 ggacatgccg cacgtgatgg cggattcagt tacgccgatc ctggacgccg gcctcgccac
     3241 gctggtggaa tacgaccaca cgatcggcgc ggaaatcagc ctgctgccga ccgttggcca
     3301 tactcccggc catgtcagcg tcatg
//
LOCUS       DATAVD010001738         6475 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1838334, whole genome shotgun sequence.
ACCESSION   DATAVD010001738 DATAVD010000000
VERSION     DATAVD010001738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6475
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1838334"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..530)
                     /locus_tag="VHX39_33275"
     CDS             complement(<1..530)
                     /locus_tag="VHX39_33275"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEX3996069.1"
                     /translation="MRNQLVILILVTAALRLAFAATTGLGVDESYMVAAGREFSLGYF
                     DHPPAAWWLSSAAAHLAGSEATVVVRLPFILLFAATTWLMARLGNAIGGPRAGFWAAV
                     ALNMSPVFGITSGTWVLPDGPLDCALTGAALCLMRALPAKRATAWWYWIAAGACAGLA
                     MFAKYSAILTIGGAGL"
     gene            550..834
                     /locus_tag="VHX39_33280"
     CDS             550..834
                     /locus_tag="VHX39_33280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996070.1"
                     /translation="MVRHFGAQLFPVSSATPKGRTMWCGCFHCLQVYEATEVIDWIDD
                     GETPLCPRCGVDAVMLGVTDLMELLTMHRTRFGRPPGAKSGTATNPDNDN"
     gene            851..1831
                     /locus_tag="VHX39_33285"
     CDS             851..1831
                     /locus_tag="VHX39_33285"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HEX3996071.1"
                     /translation="MRVCVYGAGAIGGHLAVRLAKGGAEVSVIARGKHLAAIQANGLE
                     VHAIDGVHKVKVQATDDPRTVGPVDAVFVTVKAPALPAVAAGIGPLLQQDTAVPFVMN
                     GIPWWFFMHLGGPHDGRKLPRIDPDDVLLKAVGPDRAVGGVVYSASAVIDPGVIEVEQ
                     PKSRIVLGEPNGTLSPRVAALADLITKGGISGEATTEIRTEIWNKLIGNLAGGTLAVL
                     SGLAPKNVYTEPAARDAALRVMHEAAAIAQALGARPGTNHEGRVASQSAMDHKPSILQ
                     DLELGRPMEIDGLFDAPLVLARIAGIATPTLDLLVALCKLRARASGLYGS"
     gene            1836..2834
                     /locus_tag="VHX39_33290"
     CDS             1836..2834
                     /locus_tag="VHX39_33290"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEX3996072.1"
                     /translation="MEMRVYGRTGMNISILGFGCGAVGGLMVRGAAADQETAIGRALD
                     AGINYFDTAVQYGNGASETNLGRTLQVLKPSGVFVGTKVRLPASDFGRIAAAVTQSLD
                     ASLARLQMDHVDIFHLHNAITVSGGGDTLSADQVLNDVVPAFEALRQAGKTRFLGITA
                     NGDTAALLRVIDAEKFDSAQVSYNMLNPSAGEALPAGYPAQDYGKMFDHTRKAGVGVV
                     GIRVIAGGALTASEQRHPIASPPPAPIGTANNYEADLARARRLLPLVTEGFAGSLPEA
                     ATRFAISHPAMGTILVGMATVDEFEASVAAVQKGPLPAAALARLAELRAGFAGETR"
     gene            complement(2835..3662)
                     /locus_tag="VHX39_33295"
     CDS             complement(2835..3662)
                     /locus_tag="VHX39_33295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class III extradiol dioxygenase family protein"
                     /protein_id="HEX3996073.1"
                     /translation="MATVIGGIGTSHAPTIGVAWDRGQQKEPMWAPLFDGYVPARQWL
                     DEVQPDLFLIVYNDHVNQFFFDAYPTFALGVGAVHAQADEGWGKRPLPDLPGDPDFAW
                     HLARSLVNDEFDPTICQEMSLDHGVLSFLPLLTDSNWKVPVVPLAVNVIQHPIPTPRR
                     LFRLGAALRHAIESYPKDRRIVVFGTGGLTHQLHGKNFGIKNAAWDNEFMDRLETEPT
                     SLSELSTQDYMERGGTEGVEMIMWLAMRGALGGNVRRVHRNYTAPLTTGYGLLVLET"
     gene            complement(3662..3994)
                     /locus_tag="VHX39_33300"
     CDS             complement(3662..3994)
                     /locus_tag="VHX39_33300"
                     /inference="COORDINATES: protein motif:HMM:NF019366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996074.1"
                     /translation="MDDVISGAYVFTGERSARSYALNKMANSLGSPENRARFQADETG
                     YMRGHGCSDTQIDLVLNRDWRGMMEQGASIYLLLKIGAAVGVPLPEIGAHTAGRTLAE
                     HNARRGQL"
     gene            complement(4055..4699)
                     /locus_tag="VHX39_33305"
     CDS             complement(4055..4699)
                     /locus_tag="VHX39_33305"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HEX3996075.1"
                     /translation="MKAVLLDLDGTLSDSRPGIVACFRYTLQQLGHDPDTAGDLTWAV
                     GPPIAVSLQRMIAPFGDDRVEQALTIYREQYSTVAIYDCAVYPGVVAMLDGLRNAGHT
                     MCIATSKRRDFAERVIDFLGLRDYLRGVYGAIPGGGLDRKQDLLANILEVEHLTAASC
                     VMLGDRFHDIEAAKANTIRSIGALWGYGGRDELEQAGADAIAATPEAVVTLAER"
     gene            complement(4696..5205)
                     /locus_tag="VHX39_33310"
     CDS             complement(4696..5205)
                     /locus_tag="VHX39_33310"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3996076.1"
                     /translation="MPDLPALRAERAALEQSIEARQRDLGPDHPDLAGELRALGRLAH
                     ELGDFQDAQSLLHRALALYTESVGAEHPETATTINHIGLILHDLGDLDAAAAAFERAL
                     ALDEQALGREHVNVARDCNNLGGVMRDMGDRFAAKEALDWALSVYMTQLGPDHPTTKS
                     VKRNRSLLG"
     gene            5333..>6475
                     /locus_tag="VHX39_33315"
     CDS             5333..>6475
                     /locus_tag="VHX39_33315"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3996077.1"
                     /translation="MTYDLLIRNGRVVDGSGMPAYRGDVGVKDGKIVEIGKLSGTATR
                     TVDAAGAVVAPGFIDNHCHYDAQVTWDPMCSYSCDHGATSVIFGNCSLSLAPVRPGKS
                     DRLAEFLSYVEAIPMDVLRTVKFGWETVPQYIEQLDHDLGVNVGNLIGHSAVRYYVMG
                     DECQKRTATDAEIKAMQDIVRDGMRAGALGVSVSRNQGHYDPQGVHVPALWADEKEIF
                     AIGDVLRELGTGIIQSGGGNGIEMKNSLMSRLSEATGRPVVYNNLNQSARRPGEWKEQ
                     MAHVDETVARGIRAYPTSTPNRITDFFTMDNTQTFRGLPTWHPIQLASHEEKMRAYKD
                     PEVRKKLHAEAVEFKVKTDPPGISRTWWDYMTVQHAELPKNQGLVGK"
BASE COUNT         1279 a         1965 c         2053 g         1178 t
ORIGIN      
        1 aacaaaccag cgccgccgat tgtcagaatc gcagaatatt tggcaaacat ggcgagacct
       61 gcgcaagcac ccgcggcaat ccaataccac catgcggtgg cccgttttgc cggtagcgcg
      121 cgcatcaggc acaaggcggc gccggtcaat gcgcaatcca atggcccgtc cggcaacacc
      181 cacgtgccgc ttgtgatccc gaaaaccggc gacatattca gcgcaacggc agcccagaag
      241 ccggcgcgcg gaccgccgat tgcgttgcca agacgcgcca tcagccaggt ggtcgctgcg
      301 aacagcaaaa tgaatggtaa tcgaacgacc actgtcgcct cgctgccggc gaggtgggcg
      361 gctgccgacg aaagccacca ggcggcggga gggtggtcga aatagccaag gctgaactcg
      421 cggccggcgg caaccatgta gctttcgtca acgcccagtc cggtggttgc cgcaaatgcg
      481 agacgtagtg cggcggtgac caaaatcaaa atgacaagct ggtttcgcac gcagactcgc
      541 ttccctgcca tggtgcgcca tttcggggcg cagctgtttc ctgtatcatc cgccactccc
      601 aagggaagaa ccatgtggtg cggctgtttt cattgcctcc aggtgtacga ggcgactgag
      661 gtcatagact ggatcgatga cggtgaaacc ccgctctgtc cccgctgcgg tgttgacgcc
      721 gtcatgctgg gcgtcaccga tttgatggag ctgctgacca tgcatcgcac gcggttcggg
      781 cggccgcctg gcgcaaaatc gggaaccgct accaatcctg acaacgacaa ctgaacgaac
      841 ggaatgtctc atgcgcgttt gcgtttatgg agccggggcc attggcggcc acctggcggt
      901 acggctggcg aaaggtggcg ccgaagtctc ggtcattgcc cgcggcaagc atctggcagc
      961 aattcaggcc aatggattgg aggttcacgc gatcgacggc gtgcataagg tcaaggttca
     1021 ggcaaccgac gatccgcgca ccgtggggcc ggtcgatgcc gtgttcgtta cggtgaaagc
     1081 gccggcgttg cctgctgtgg cggccgggat cggtccgttg ttgcaacagg ataccgccgt
     1141 gccgttcgtg atgaacggca ttccgtggtg gtttttcatg catctcggcg ggccgcacga
     1201 tggccgcaaa ctgccgcgga tcgacccgga cgacgtgctg ttaaaggcgg ttggcccgga
     1261 tcgtgccgtt ggcggtgtgg tttactctgc cagcgcggtc atcgatcccg gcgtgatcga
     1321 agttgagcaa cccaaaagcc ggatcgtgct tggcgaaccc aacggcacgc tgagcccgcg
     1381 cgtcgccgcc ctcgccgacc tgattaccaa aggcggcatc agcggcgagg caacgacgga
     1441 aattcgcacc gagatctgga acaaactgat cggcaatctc gcgggcggca ccttggctgt
     1501 gctgtcgggt ctggcgccga aaaacgtcta cacggaaccc gccgcgcgtg atgccgcatt
     1561 acgcgtcatg cacgaagccg ccgccattgc gcaggcactt ggcgctcgtc cagggaccaa
     1621 ccacgaaggc cgtgtcgcca gccaatctgc catggatcat aaacccagca ttttgcaaga
     1681 cctcgaactg gggcggccaa tggagatcga cgggctgttc gatgcgccat tggtgctggc
     1741 gcggattgcc ggcatagcga caccgacgct cgacctgctg gtcgcacttt gcaaacttcg
     1801 cgcccgcgcc tcgggccttt atgggagctg acgacatgga aatgcgcgtt tatggccgca
     1861 ccggcatgaa catctcgatc ctgggctttg gctgcggcgc agtgggcggc ctgatggtgc
     1921 gcggcgctgc tgcggatcag gagacagcga tcggccgcgc gcttgatgcc ggcatcaact
     1981 acttcgatac cgcagtccag tacggcaacg gtgcctccga aacgaacctg ggccgcacgc
     2041 tgcaggtgtt gaaaccatcg ggcgttttcg taggcaccaa agtccgcttg ccggcatcgg
     2101 atttcggccg tatcgccgca gcggtgacac agtcgctgga cgccagtctg gcacggctgc
     2161 aaatggatca tgtcgacatt ttccatttgc ataatgccat cactgtgagc ggcggcggtg
     2221 acacgctcag cgccgatcag gtgttgaatg acgtcgttcc cgcctttgaa gcgctgcgtc
     2281 aggcgggcaa gacgcggttc ctcggcatca ctgccaacgg cgataccgcg gcgctgctgc
     2341 gggtaatcga tgcggagaaa ttcgacagcg cgcaggtcag ttacaacatg ctaaacccct
     2401 cagccggtga ggctttgccg gctggctatc cggcgcagga ctacggcaag atgttcgatc
     2461 acacgcgcaa agcgggcgtg ggcgtcgtcg gtatccgcgt catcgccggc ggcgctctga
     2521 ccgcgtccga gcaacgtcat ccgattgcct ctccgccacc ggcaccgatc gggacagcca
     2581 acaactacga agctgatctc gcgcgcgcgc gccggttgtt gccgttggtg acggaagggt
     2641 ttgccggcag tctgccggag gcagcgaccc gcttcgccat atcgcatccg gcgatgggca
     2701 ccatcctggt cggcatggcg acggtggacg agttcgaggc ctcggtcgcg gccgtgcaaa
     2761 aaggaccgct tccggccgcg gcgttggctc ggctggcaga gttgcgcgcg ggctttgcgg
     2821 gggagacgcg gtagctaggt ctccaacacc agcaacccgt aaccggtcgt cagtggcgcg
     2881 gtgtaattcc ggtgcacccg cctgacgttg ccgcccagtg cgccgcgcat cgcgagccac
     2941 atgatcatct cgacgccctc ggtgccgccg cgttccatgt agtcctgcgt cgacaactcg
     3001 gacaggctgg tcggctcggt ttccaggcgg tccatgaact cgttgtccca ggcagcgttt
     3061 ttgatgccga agttcttgcc gtgcagttgg tgagtcagcc cgccggtgcc gaacacaacg
     3121 atgcggcgat ccttcgggta ggactcgatc gcgtgccgta acgctgcacc aagacggaac
     3181 aaccgccgcg gcgtcgggat cggatgctgg atcacgttca ccgcgagcgg aacgaccgga
     3241 accttccaat tggaatcggt caacaatggc agaaacgaca gcacgccatg atccagtgac
     3301 atttcctggc agatcgtcgg atcgaactca tcgttcacca gcgaccgtgc gagatgccag
     3361 gcgaaatccg gatcacccgg cagatccggc aatggccgct tcccccaccc ctcatccgcc
     3421 tgggcgtgca ccgctcccac gccaagggca aaggtcgggt aagcatcgaa gaagaactga
     3481 ttcacgtgat cgttgtaaac gatcaggaac aaatccggct gcacctcgtc cagccattgc
     3541 cgagccggaa cgtaaccatc gaacaacggg gcccacatcg gctccttctg ctgtccgcga
     3601 tcccaggcaa cgccgatggt gggcgcgtga gacgtaccga tgccgccaat gactgtggcc
     3661 attacagttg tcctctgcgt gcgttgtgtt cggcgagggt gcgacccgcg gtatgggcgc
     3721 cgatttccgg cagcggcaca ccgaccgccg caccgatctt cagcagcagg tagatgctgg
     3781 cgccttgttc catcatgccg cgccaatcgc ggttcaacac gaggtcgatc tgcgtatcgg
     3841 aacagccgtg accgcgcata tagcccgttt catcggcctg aaaccgtgca cggttctcag
     3901 gcgaaccaag cgagttggcc atcttgttga gagcgtaact gcgcgccgac cgttcgccgg
     3961 tgaagacgta ggcgccggaa atgacgtcgt ccaaagcggc ctccctgaga aatcgtggca
     4021 ctttgtaacg cgcgcggcgg cgaaccgcaa acggttagcg ttcggccagg gtcacaaccg
     4081 cctcgggtgt ggcggcgatg gcatcggcgc cggcctgttc cagttcgtcg cgtccgccgt
     4141 aaccccacaa ggcgccgatc gaacggattg tgttggcttt cgctgcttcg atgtcatgga
     4201 accggtcgcc gagcatgacg caggatgcag cggtcaggtg ttcgacctcc aggatgttgg
     4261 ccaacaggtc ctgcttgcga tccagtccgc cgcccgggat cgcgccgtag acgccgcgga
     4321 ggtagtcgcg caatccaaga aaatcgatga cccgctcagc gaagtcgcgc cgcttcgagg
     4381 ttgcgatgca catcgtgtgg ccggcattgc gcaacccatc cagcatggcg acgacacccg
     4441 gatacaccgc acagtcatag atcgcgactg tggaatactg ttcccgatag atggtcaacg
     4501 cctgctccac ccggtcgtcg ccgaacggtg cgatcatgcg ttgcaacgac acggcgatcg
     4561 gtggtccgac agcccaggtg agatcgccgg cagtgtcggg atcgtggccg agctgctgca
     4621 aagtgtaacg gaagcaggcg acgatcccgg gccgtgaatc cgacaaggtg ccgtcgaggt
     4681 cgagcaggac cgctttcatc ctagtaacga tcggttgcgt ttcacggatt tggtcgtcgg
     4741 atgatcgggg cccagttgcg tcatgtaaac cgataaagcc cagtcgagag cttctttggc
     4801 ggcgaaacgg tcgcccatat cgcgcatgac gcctccaaga ttgttgcagt ctcgtgcaac
     4861 gttgacgtgc tcgcggccaa gagcctgttc gtccagtgcc agtgctcgtt cgaatgctgc
     4921 cgccgcagca tcgagatcgc ccaggtcgtg caatatgagg ccgatgtgat tgatggtggt
     4981 ggcggtttcc ggatgctccg cacccacgga ttccgtgtac agcgccagtg cccgatgcag
     5041 caacgattgg gcgtcctgga agtcgcccag ttcgtgcgcg aggcggccaa gagcgcgaag
     5101 ctcgccggca aggtccggat gatcggggcc gaggtcgcgt tgccgtgcct cgatggattg
     5161 ttccagcgcg gcacgctcgg cgcggagggc aggcaggtca ggcataagcg ggctttcaga
     5221 cagatcggtg tgcgtagtgg tatcaggaca ggccagggtt gcaccacccc agggttgcgc
     5281 tactgtcctc tcaggtaatg cactgggtga accagacaag ggagagagac caatgacata
     5341 tgatctgtta atccgtaatg ggcgtgtcgt cgatggctcg gggatgccgg cataccgcgg
     5401 cgatgttggg gtcaaggacg gcaaaatcgt cgaaatcggc aaattgagtg gcaccgccac
     5461 gcgcaccgtc gatgcggccg gcgcggtcgt ggcaccaggc ttcatcgata atcattgcca
     5521 ctatgacgcg caggtgacgt gggacccgat gtgttcctat tcgtgcgacc acggggcgac
     5581 gtcggtgatc ttcggcaatt gctcgctgtc gctggcgccg gtgcggccag gcaaatcgga
     5641 tcgcctcgca gaatttcttt cctatgtcga agcgatcccg atggacgtgc tgcgcacggt
     5701 taaattcggc tgggaaacgg tgccgcaata tatcgagcag ctcgatcacg atctcggcgt
     5761 caatgtcggc aacctgatcg gtcactccgc tgtccgctac tacgtcatgg gcgacgagtg
     5821 ccagaaacgc acagcgaccg atgccgagat caaagcaatg caggacatcg tccgcgacgg
     5881 catgcgcgcc ggcgccctgg gcgtgtcggt gtcgcgcaat cagggccact acgatccgca
     5941 aggcgtgcat gttccggcac tgtgggccga cgagaaagaa attttcgcga ttggcgatgt
     6001 gctgcgcgaa ctcggcaccg gcatcattca aagcggtggc ggcaacggca tcgaaatgaa
     6061 gaacagcctg atgagccggc tgtcggaagc caccggccgc ccagtggttt acaacaacct
     6121 gaaccagtcg gcacgccgtc ccggcgagtg gaaagagcag atggcgcacg tcgacgagac
     6181 ggtcgccaga ggcatccgcg cctacccgac cagcacgccc aatcgtatca ccgacttctt
     6241 caccatggat aacacgcaga cttttcgagg tttgccgacc tggcatccga ttcagttggc
     6301 ctcgcacgaa gagaagatgc gcgcctacaa agatcccgag gtgcgcaaga aattgcatgc
     6361 cgaggcggtc gaatttaaag tcaaaaccga tccgccgggc atcagccgca cgtggtggga
     6421 ctatatgacc gtgcagcacg cggaattgcc gaagaaccag gggctggtcg gcaag
//
LOCUS       DATAVD010001739         2010 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2771363, whole genome shotgun sequence.
ACCESSION   DATAVD010001739 DATAVD010000000
VERSION     DATAVD010001739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2771363"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1236
                     /locus_tag="VHX39_33320"
     CDS             <1..1236
                     /locus_tag="VHX39_33320"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX3996078.1"
                     /translation="RDTPSPAGRGARARLSMKLTDIKTFVVGNPPPHYGGRYFVFVKL
                     TTDGNVTGVGEAYCVPFEPHLVARMLSDVFERFFLNEDPHDIETAWRRVYSAGYSQHP
                     DLTLMGVLSALEMACWDIIGKEAGQPIYKLLGGRVHQRLRSYTYIYARPGDPTDVYSD
                     PDLAATRAVEYLAQGFTALKFDPAGPYTAFDGRQLRLADLDRSERFARQLREAVGSNA
                     DLLFGTHGQMTAAAAIRLAKRLEPYDPLWLEEPVPPDAPEEMAKVARATTIPIATGER
                     LATKYDFGHVLRAGAAAILQMNLGRVGGILEAKKIAAMAEVHHVQIAPHLYCGPVVGA
                     ANIQLATCSPNFLILEGIERWGGFHAQLLKKPIQWEAGYVIPPTEPGLGVELNEELIQ
                     QHPYAGNRLHLEMGADPIA"
     gene            complement(1270..>2010)
                     /locus_tag="VHX39_33325"
     CDS             complement(1270..>2010)
                     /locus_tag="VHX39_33325"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HEX3996079.1"
                     /translation="HLCVSYYYKANRRTLNDDYGRWLGKVKAGLQFMLLRKGPLSLSV
                     NQAGGFFRSSPGRAYPDLQVYFNPLSYEIPKDAGQAPRPKPYSGFLLAVSPCRPSSRG
                     SVAIASSRAADPPLIRPNFLSTQHDIDAAIEGSLLLRKFVSAPALETITVEETEPGGR
                     VVSEADMLQYFREAGGSIYHLCGSCAMGSSASTSVVSSRLKVHGLEGLRIADASVFPN
                     VTSGNINAPTMMVAEKAAAMILEDASGV"
BASE COUNT          383 a          635 c          624 g          368 t
ORIGIN      
        1 cgcgacacgc catctcctgc gggacgaggc gcgcgcgcgc ggctatccat gaaactcact
       61 gacatcaaaa cattcgtggt cggcaatccg ccgccccact acggcggccg ctattttgtg
      121 ttcgtcaagc tgacgacgga cggcaatgtc accggtgttg gggaagccta ctgcgtcccg
      181 ttcgagccac acctcgttgc gaggatgctg tcggatgtgt tcgagcggtt cttcctcaac
      241 gaagaccctc acgacatcga gacggcatgg cggcgcgtct actcggccgg ttactcccaa
      301 cacccggacc tgacactgat gggcgttctg agcgccctcg agatggcctg ctgggacatt
      361 atcggcaagg aagccggtca accgatctac aagctcctgg gtgggcgcgt acatcagcgg
      421 ttgcgctcgt acacgtacat ttacgcgcga cccggtgacc cgaccgacgt ctactccgat
      481 ccggacctgg ccgccacgcg cgcagtggag tacctcgcgc agggcttcac ggccttgaag
      541 ttcgatccgg caggacctta tacggccttc gacgggcgcc agcttcgtct ggccgacctt
      601 gatcgcagcg agcgcttcgc acggcagttg cgggaggctg ttggttcaaa cgccgacctg
      661 ctgttcggaa cccacggcca gatgaccgct gccgccgcca ttcgactggc caaacgcctg
      721 gagccttacg atcccttgtg gctcgaggaa ccggttcccc ccgatgcacc cgaggagatg
      781 gcgaaagtgg ctcgtgccac cactattccc attgccacgg gggagcggct cgcaaccaag
      841 tacgattttg gacacgtgct gcgggcgggc gccgccgcca tattgcagat gaacctgggt
      901 cgggtcggcg gcatactcga ggccaagaaa atcgcggcaa tggccgaggt tcaccacgtt
      961 caaatcgctc cacacctgta ttgcggtccc gtggtgggtg cggccaacat ccaattggcc
     1021 acttgcagcc ctaacttcct gatcctggaa ggcatcgagc gttggggcgg ctttcacgcg
     1081 caactgctga agaaaccgat ccagtgggag gccggctacg tgatcccgcc taccgaaccg
     1141 ggtctgggcg tggagttgaa cgaagaactc atccagcaac acccctacgc gggaaaccgc
     1201 ttgcacctgg agatgggagc cgacccgatc gcttgaggtt aggggccgct gcgagcgctc
     1261 ccgcgtgcgt cacacgccac tcgcatcctc caggatcatt gcggcagcct tttccgcgac
     1321 catcatggtc ggcgcgttga tattcccgga agtgacattc gggaacacgg aggcatccgc
     1381 gatccgcaag ccctccaatc catgtacttt caggcggctg gacacgacgg aggtgctcgc
     1441 agaagacccc atggcgcatg agccgcacag atggtagatg gacccgccgg cctcgcggaa
     1501 atattggagc atgtccgcct cgcttacgac gcgaccgccc ggttcggtct cctcgaccgt
     1561 gatcgtctcg agcgccggag cgctcacgaa cttgcggagc agcaggcttc cctcaatcgc
     1621 cgcgtcgatg tcatgttggg tgctgaggaa attcggcctg atgagcggcg gatcggcggc
     1681 gcggctggac gcgatagcga cgctgccgcg actactgggc cggcacgggg aaaccgcgag
     1741 cagaaaccct gagtagggct tcggtctcgg ggcctggccg gcatccttgg ggatctcata
     1801 cgagagcggg ttgaagtaaa cctgcaggtc gggatacgca cgtccagggg atgaccggaa
     1861 gaagccgccc gcctggttga cactcaatga gagcggtccc ttgcgtagca gcatgaattg
     1921 cagtccagcc ttgaccttgc ccagccagcg gccatagtcg tcattcagag tccgccggtt
     1981 ggctttgtag taatagctga cgcacagatg
//
LOCUS       DATAVD010001740         2138 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_537044, whole genome shotgun sequence.
ACCESSION   DATAVD010001740 DATAVD010000000
VERSION     DATAVD010001740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2138
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_537044"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1748
                     /locus_tag="VHX39_33330"
     CDS             <1..1748
                     /locus_tag="VHX39_33330"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3996080.1"
                     /translation="LTKYHDIPGFSPSDTIAEADFVWRDGSLIEAIPAILHGTFDGLI
                     ATHVAEHLPDLIGFLLAASQLLKPDGMLVLELPDKRFCFDFFQPSTTTGDLLDARGRT
                     RHSAGTLFDSCARFTERGTDRAWRKGRQIQPFRLPNTLEQAKAMLDVKPDGVYVDSRT
                     WRFTPASFQLVMLELHLLRVIPWDIERIETADDGEFHVWLQQREVQLAADAVATRRLN
                     LLRETVLETKEQVAQLEQPPPAASPERARIQAATLLLSISAVIPLYNGSKFIEAALLS
                     VFAQTVQPKEVIVVDDGSTDRGPDQVRAMAERYPIVLLSRPNGGQSSARNFGVAQSSG
                     ELIALLDQDDIWYATHLESLMRPFVERSVGAPLGWVYSDVDEIDGDGQMICQCVLSTL
                     PTEHPKRNLFACLREDMYVLPSASLISRKAFDDVGGFDELLSGYEDDDLFLRMFRAGY
                     ANVFLECSLSQWRIYFDSSSYSFRMRRSCSIFTRKLLTNYADDPKRGLYYHRDLLLPR
                     FYRTAVLEYRDALASGDADRVHEARDELAFLVDRMPSKRRFMGPLLSVARSQRAAQLA
                     FAARRLARPILRRVV"
     gene            1925..>2138
                     /locus_tag="VHX39_33335"
     CDS             1925..>2138
                     /locus_tag="VHX39_33335"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3996081.1"
                     /translation="MEDQAITAVIPLYNGAEFIEESLNSVLTQTLPPVKIVVVDDGST
                     DAGPDIVKMMARRHNWRSRPAVWLVRS"
BASE COUNT          422 a          617 c          621 g          478 t
ORIGIN      
        1 ttttgacaaa atatcacgat attcccgggt tctcaccatc ggataccatt gcggaagccg
       61 atttcgtctg gcgtgatggt tcgttgatcg aagcgatccc ggccattttg catggcacgt
      121 tcgacggcct gattgccacc catgtcgccg agcacctgcc tgatctcatc ggttttctcc
      181 tggccgcttc gcagttgctc aagccggatg gaatgttggt tctcgaattg ccggacaagc
      241 gattttgctt cgatttcttc caaccttcaa cgacgaccgg cgacctgctg gatgccagag
      301 gccgcacgcg acacagtgcc gggacactgt tcgactcatg cgcccggttc accgaacgag
      361 gcactgaccg cgcgtggcgc aaagggcggc agatccaacc attcaggctg cccaatacgc
      421 ttgagcaggc caaggccatg ctcgatgtca aacctgatgg cgtttacgtc gattcgcgta
      481 catggcggtt cacgccggca agttttcagc tggttatgct ggaactgcat ctgctgcgcg
      541 tgatcccatg ggatatcgaa cggatcgaga ctgccgatga cggtgagttc catgtctggc
      601 tacaacagcg tgaggtgcag cttgcggccg acgctgtcgc gacaagacgc ctgaatctcc
      661 tgcgggagac ggtgctggag accaaagagc aggtcgcaca actggaacaa ccgccgccgg
      721 ctgcatcgcc tgaacgagca cgtattcagg ccgcaacctt gctgctatcg atctcggctg
      781 tcattccgtt gtacaatggc agcaagttca tcgaagcggc attgctgagt gtcttcgccc
      841 aaacggtgca gccaaaagag gtcattgtgg ttgacgacgg ctcgaccgac cggggacctg
      901 atcaggtcag ggcgatggcc gagcggtatc caattgtctt gctttcccgg ccgaacggcg
      961 gccaatcatc agctcgcaac tttggcgtgg cgcaatcatc cggtgagttg attgcgctgt
     1021 tggatcagga cgatatctgg tacgccacgc acctcgaatc gctgatgcgg ccgtttgtcg
     1081 agcgctcggt cggtgcaccc cttgggtggg tctatagcga tgtcgacgag atcgatggcg
     1141 atgggcagat gatctgccag tgcgttctga gcacgttgcc gaccgagcat ccgaaacgca
     1201 atctattcgc ctgcctgcgc gaagacatgt acgtcctgcc aagcgcctcg ctgatttcgc
     1261 gtaaagcatt cgatgacgtc ggtggctttg atgagcttct gtcggggtac gaggacgacg
     1321 atttgttcct acgaatgttc cgcgcaggct atgcaaacgt gtttctcgag tgctccctgt
     1381 cccaatggcg gatttatttc gacagttcat cctatagttt ccgaatgcgc cgaagctgtt
     1441 cgatattcac gcgaaaatta ctgacgaatt acgctgatga tccgaagcgc gggctatact
     1501 accatcgcga cttgttgctg ccgagattct atcgaactgc ggtgcttgaa taccgcgatg
     1561 cgctggcctc gggcgatgcg gaccgcgtcc acgaagcacg tgacgaattg gcgttcctgg
     1621 tcgaccggat gccatccaaa cggcgtttca tgggtcccct gctgagcgtg gcgcgatcgc
     1681 agcgagcggc acaattggcg ttcgcggccc gccgtctggc tcgtccgatc ctgcggcgtg
     1741 tggtctgatt ccgagcccga aggccggcct cgacgcaatg gcccacccca gatcagtcgc
     1801 cggttctcat cctggataaa tggcgatagc atggtggccg accgatgctt ctcgtgcgtc
     1861 aaccttgcgc ccggcccagg gccagtgctg tcccacattc gctggaaggg caacagagga
     1921 aaccatggaa gaccaggcga ttacagccgt tatcccgctt tataatggtg ccgaattcat
     1981 tgaggaatca ctcaatagcg ttctgacgca aactctgccg ccggttaaaa tcgttgttgt
     2041 agacgacgga tcgaccgatg ccggtcccga catcgtcaaa atgatggcac ggcggcacaa
     2101 ttggcgttcg cggcccgccg tctggctcgt ccgatcct
//
LOCUS       DATAVD010001741         4634 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1464667, whole genome shotgun sequence.
ACCESSION   DATAVD010001741 DATAVD010000000
VERSION     DATAVD010001741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4634
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1464667"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..248)
                     /locus_tag="VHX39_33340"
     CDS             complement(<1..248)
                     /locus_tag="VHX39_33340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996082.1"
                     /translation="MVEDFLPADVRDFVARYIDTIVQLEALLLLRADESHDWNVTEMA
                     ARLHTTGQEAAKALQRLTEDGLAWRESERYRLGCQDVAL"
     gene            complement(514..1008)
                     /locus_tag="VHX39_33345"
     CDS             complement(514..1008)
                     /locus_tag="VHX39_33345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996083.1"
                     /translation="MAAHAARADCGPVIAAFQKAYATERFAWFTVTDVNQTPSGDPMM
                     VSIGDVSYVPVEAGPKFKGKYQTTGFLNGVLSDSLRRRESEGKAGCKPLADRTLRGEP
                     AVGFNVSGGIPISGADSSSEDIWISRGTGLPIIQGMDSTGHGGVLWVYGAAVSAPPPE
                     KLLK"
     gene            complement(1150..1329)
                     /locus_tag="VHX39_33350"
     CDS             complement(1150..1329)
                     /locus_tag="VHX39_33350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996084.1"
                     /translation="MSNDRATLGLCLLTLVSAAASAFLHFSPIYIAIPAIAAVVCAMR
                     TPVRTLVDMFFGGRR"
     gene            complement(1891..3468)
                     /locus_tag="VHX39_33355"
     CDS             complement(1891..3468)
                     /locus_tag="VHX39_33355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996085.1"
                     /translation="MRKILLASAALLGASSGGAFAQLAPTTPPAPSTAYNQSQGHYAA
                     PWFGAPSAQNYNNSFGSTFGGAKVPVLGAQPSPGTVVIRLNGKVYAEVSAAWGTVLHT
                     APGTFGSAGYKLNPVGMESFFRLYPGIDGMATNGLRYGAAVELRENFMGGDSFGTPAA
                     VPATAATGTAGFSTTAAIGTATSASGNSSGQTVYVRRAFVYMGADQVGIVRLGQQDGL
                     VGIYDMLGKFTTGIWDGGIGNLNNSANQGSTPSQYLISWPFMSGNGTEYGDNKIVYLS
                     PSLYGVDVGFEYGPNMGNSFSQSVTSDAYAPGTCTVASANCINLASGQDGSRWINRWT
                     FGARFIEEFAGADVEGYGLYVVSGHENNTAAGGQILAGPKNISAGTGNLLYDGLNFFN
                     GGLQATWNGITANVDVTYGRENGSNAMVPKGGVSMHGQLFGLSYFSGPWSFGADAAII
                     DSQGTAQLTHTSQRHEFATAVGGAYRIAPGIVMCLEYMYEQKHQGDFNFDSNSVGSPI
                     GNDIHIQGVVFATIVNW"
     gene            complement(3768..>4634)
                     /locus_tag="VHX39_33360"
     CDS             complement(3768..>4634)
                     /locus_tag="VHX39_33360"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3996086.1"
                     /translation="QELGIQLVIRHRRGVTLTQAGSCLMERLDVILGLLNAPLEPAAT
                     PERDVGTITVALPPEPAPLLVPRLLEACRERWPHLTLVIREGTSASLEEWVLDRRVDI
                     AVLQDPATMDDLTIEPVVTERLGLVSGVRTIQLEGSDSVRVRQLGELHLILPHPRHWI
                     RRLVDTASFRRGVVLNRVQQVDGVALTKEMVRDGCGHTVLPFVAVRDEVARGTLSFLP
                     IDHDPLLTIHAIASHSGVAPAPFVTEVSRTLREVMSSQARSGVWRWASVTGIPARAAG
                     SDAIPELEAAIE"
BASE COUNT          912 a         1470 c         1369 g          883 t
ORIGIN      
        1 agcgcgacat cctggcagcc aagtcgatat ctctcagact cacgccatgc gaggccgtcc
       61 tcggtcagcc gctgcagcgc cttggcagct tcctgaccgg tcgtatgcag gcgcgcggcc
      121 atttctgtta cgttccaatc gtggctctcg tcggctcgca gaagcagcag cgcttccagc
      181 tgtacgatcg tgtcgatata tcgagcaacg aagtctcgaa cgtcggcagg tagaaagtcc
      241 tcgaccattc gcatcctgtc aacgtttcgc cgacattcgt gggcctcatc caggttaccc
      301 aaacggatac gcaattgcca ctgaagatca ggaggaactg cttccacacg gaggcactga
      361 cgtcgcagcg caacaccggc gccggcactt cgggatagct gggatttcga acttcctctc
      421 gagtgccccc gatccaatcc agacgaaccg gcgacccgaa caaccagtca ttcaaccggc
      481 aggtctcctg caggtcgtgc gcggttgctg tggtcacttg agaagtttct ccggtggcgg
      541 tgcggacacc gcggcgccat agacccaaag caccccgcca tgacccgtgc tgtccatgcc
      601 ttgaatgatc ggcaggccgg tgccgcgact gatccatatg tcttcggacg aggagtcggc
      661 gccgctgatc ggaatgccac cgcttacgtt gaagccgaca gccggctcgc cgcgcagcgt
      721 ccggtcggcc aacggcttgc aaccggcctt gccttcgctc tcgcgacgcc tgagcgaatc
      781 gctcaggact ccgttcagga aaccggttgt ctggtacttg cctttgaatt tgggccctgc
      841 ttcaactggc acatagctga cgtcgccgat gctgaccatc atcggatcgc cactcggcgt
      901 ctggttgacg tcggtcaccg tgaaccaggc gaaccgctcg gtggcgtagg ctttttgaaa
      961 ggccgcgatg accgggccgc aatcggcccg tgcggcgtgc gccgccatca tgccgagggc
     1021 ggttgcgcac aatccaatca gcaccggatg tttaagaatc gtcacgaggg ctccccaact
     1081 atctgactga gcgtgaccat gggatcaatc ttcctcacgc cttcgatctg caccggctgc
     1141 gccaggaggt caccggcgac cgccgaagaa catgtccacg agtgttcgga cgggcgtacg
     1201 cattgcgcag acgaccgcgg ctatcgctgg aatggcgatg tagatcggtg agaagtgcag
     1261 aaaagcagac gcagcagccg agaccagcgt gagcagacac aagccgagcg tcgcgcgatc
     1321 gttgctcaaa cctccgtccc ccgaaatcgt atcgctgtcc catttccgtt agaatcaacg
     1381 aacattatcc ccgccttctc caacgcaggt cgcatcgccg ccagcgtatc tgcattgtgc
     1441 tttcgcgctc ctggcgtggc aatcccgatg agttccttgc ctacgtggca cccctgggct
     1501 gggaacccgt cgctctgaca ggagactacg tttggaccag cagaacgccg cgcccgacgt
     1561 caggtctctt tgtgaatccc attcgaagct gactgctcca ggcgcctgcg tccgtgcaca
     1621 aaccaatcat tgggccaggg attttcagtg atatcccagt cgccccacac gacgccaacg
     1681 gcctgctgat tggccgttcc gcaccggaca ccgtttcaat tgattccgaa atgctaacga
     1741 tatatccagt tgaaaatgac agagtacgtc ccggatttcc gggcagatct cggctacttc
     1801 gcactatcgc tggacccggc ctcaaacgaa cgaaaaacaa aggcggcggg gttgcccccg
     1861 ccgccttgcc ggatcgcaag gtaacaaagc ttaccagttc acgatggtcg cgaacacgac
     1921 gccttgtatg tggatgtcgt tgccgatcgg gctgccgacg ctgttcgaat cgaagttgaa
     1981 gtcgccctga tgcttctgct catacatata ttcgaggcac atcacgatgc cgggcgcgat
     2041 acgatacgcc ccaccaacgg cggtcgcgaa ttcgtgccgt tgcgacgtgt gagtcagctg
     2101 cgcggtgccc tgcgagtcga tgattgccgc atctgcgccg aacgaccatg ggccactgaa
     2161 gtagctgaga ccgaacagtt gcccatgcat cgacacaccg cctttcggga ccatagcgtt
     2221 cgagccgttt tcccggccgt aagtgacgtc gacgttggcg gtaatgccgt tccacgtggc
     2281 ctgcaggcca ccgttgaaga agttcagccc atcatacaac aggttgcccg tcccggcact
     2341 gatgttcttc ggcccggcga gaatctgacc gcccgcggcg gtgttgttct catggccgga
     2401 gacgacgtac aggccataac cttccacgtc cgcgccggcg aattcctcga taaaccgggc
     2461 gccgaaggtc cagcggttga tccagcggct gccatcctgg ccactggcga ggtttatgca
     2521 gttcgcgctg gcgacggtac acgtgcccgg cgcatacgcg tcagaggtga ccgattggct
     2581 gaacgagttg cccatgttcg ggccatactc gaagccgaca tcgacaccgt acaacgacgg
     2641 gctgaggtaa acgatcttgt tatcaccgta ttccgtgccg ttacccgaca tgaacggcca
     2701 ggaaatcagg tattggctcg gggtggaccc ctgattggca ctgttgttca ggttgccgat
     2761 gccgccgtcc cagatgccgg tggtgaactt gccgagcata tcgtaaatgc ccaccagccc
     2821 gtcctgctgg ccgaggcgta cgatacccac ctggtcggca cccatataaa cgaacgcacg
     2881 gcgtacatac acggtctgac ctgaggagtt gccgctggcg cttgtggcgg tgccaatcgc
     2941 tgcggtggtg gaaaagcccg cggtgccggt ggcagccgtg gccgggacgg cagcgggggt
     3001 cccgaaggag tcgccaccca tgaagttttc gcggagttcg accgcggcgc cgtaacgcag
     3061 gccattggtc gccatgccgt cgatgccggg atacagacgg aagaacgatt ccataccaac
     3121 cgggttaagc ttatagccgg cagagccgaa tgtgcccgga gcggtatgca ggaccgtccc
     3181 ccaggccgcg ctaacttccg catacacttt gccgttcaac cggataacga ccgtgcccgg
     3241 cgaaggctgg gcgccgagca ccggaacttt cgcaccgcca aacgtgctgc cgaacgagtt
     3301 gttgtagttt tgcgccgagg gcgcgccaaa ccacggcgcg gcatagtggc cctgcgactg
     3361 gttgtaagcc gtcgacggcg ccggcggtgt cgtcggcgcc aactgggcaa atgcgccacc
     3421 gctgctcgcc ccgagcagag ccgcactggc caacaaaatc ttacgcatcg tgtccctcct
     3481 gcattcgccg gatttgttgg cccggcgccg attccgaccc tgtttcgatg gcccctgacg
     3541 accagcctct cgcttgcaac gagagacggc gatcacgagt cactcgggtc tgggatttac
     3601 tatgccggga agggcttttc ctaagaagta gttaaatgaa atgtgtgaca tttatttgag
     3661 gtcacgtggt acaattacaa cattacttga aattgtcaaa agaatgccgt agccgccagc
     3721 gcgcgaaagg gctggcaact ccaaagcgca ccaatgatac tttggattta ctctatggca
     3781 gcctccagtt caggaattgc atccgacccg gcggctctcg ccgggatccc tgtcacgctg
     3841 gcccatctcc aaaccccgct ccgggcctgg ctggacatca cctcgcgcag cgtccggctg
     3901 acttccgtga caaacggagc cggcgcgacg ccgctgtgac tggcgatcgc gtgaattgtg
     3961 agcaacggat cgtgatcgat cggcaggaac gacagtgttc cccgcgcgac ctcatcgcgc
     4021 accgcgacaa acggcaggac cgtatggcca cagccgtcgc gcaccatttc tttggtgagc
     4081 gccacgccgt cgacctgctg gacccgattg agaacaacgc cgcgacggaa cgaggcggta
     4141 tccaccagcc gcctgatcca atgcctcgga tgcggcagga tcagatgcag ctcaccaagc
     4201 tggcgcaccc ggaccgagtc ggatccttcc agctggatcg tgcgcactcc ggacacgagg
     4261 ccgaggcgct cggtcacgac gggctcgatg gtgaggtcat ccattgtcgc ggggtcctgc
     4321 aacaccgcga tgtcgacgcg gcgatccagc acccattctt ccagtgacgc gctggtgcct
     4381 tcacggatga ccagggtcag gtgcggccac ctctcccggc atgcttccag caggcggggg
     4441 accagcaagg gcgccggctc cggcggcagt gccacggtaa tcgtgccgac atcccgttcg
     4501 ggtgtcgccg ctggctcgag cggcgcgttg agcaagccca ggataacgtc gagccgttcc
     4561 atgaggcagg agccggcttg tgtgagagtg acgcctcggc ggtgccggat caccagctgg
     4621 atgccaagct cctg
//
LOCUS       DATAVD010001742         2076 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2027302, whole genome shotgun sequence.
ACCESSION   DATAVD010001742 DATAVD010000000
VERSION     DATAVD010001742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2027302"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1494
                     /locus_tag="VHX39_33365"
     CDS             <1..1494
                     /locus_tag="VHX39_33365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006117471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HEX3996087.1"
                     /translation="YCRRKHGEKWEAPHPVIHDILAETYGIMVYQEQVMQIAQTMAGY
                     SLGGADLLRRAMGKKIASEMEAQRTIFTDGAIKNGIDPKKATEVFDLMAKFADYGFNK
                     SHAAAYGLVAYQTAWLKANHPEVFIAACMSLAINNTDRLAALKQEAERGSIKILPPDI
                     NRSAADFSVERMEDGRLAIRYALAAVKKVGFSAMESVVAARDGVSFEDVTDFATRVDP
                     RQINRMQIENLVRAGAFDRLDGNRARLFAGAETVLRRAQADREEKESGQIGLFGGVAS
                     KPEPLRLPDVPDWPPLERLAFEAEAIGFHLTAHPLDAYAQALKRLGVTSSIHVESRAA
                     NGVTRVKIAGTVVATKERITRTGSRMAWVRISDASGSVEVTCFSEVLSRSRETLAHGS
                     NVLVTAELKVEGEAVRVTAQEVALLDEAVASTGASIRIWLRETETVPHIRDLLARQGG
                     GKGRVILVPCIDDERSVEIALPGGYSVTPRLAQALTSLPGVERVDEV"
     gene            complement(1499..1684)
                     /locus_tag="VHX39_33370"
     CDS             complement(1499..1684)
                     /locus_tag="VHX39_33370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996088.1"
                     /translation="MTNYDDDYVPRLLATCVAGLLIMAACMLYCLPRPIAIVAISWAM
                     LSISVGVSFGHSVLSEP"
     gene            complement(1929..>2076)
                     /locus_tag="VHX39_33375"
     CDS             complement(1929..>2076)
                     /locus_tag="VHX39_33375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEX3996089.1"
                     /translation="VALAETFGLPVHAVGVGEQASDLRPFEAFDFARGLVGAYQQMQD
                     QAVE"
BASE COUNT          409 a          611 c          687 g          369 t
ORIGIN      
        1 tactgccgcc gcaagcacgg cgagaaatgg gaagcgccgc acccggtgat ccacgacatc
       61 ctggccgaga cctacggtat catggtctac caggaacagg tgatgcagat cgcccagaca
      121 atggcgggct attcgctggg cggcgcggat ttgttgcggc gggcgatggg gaagaagatc
      181 gcctcggaga tggaggcgca gcggaccatc ttcaccgacg gcgcgatcaa gaacgggatc
      241 gatccgaaga aggcgaccga ggtcttcgac ctgatggcga agttcgctga ttatggcttc
      301 aacaaatcgc atgccgccgc gtatgggctg gttgcctatc agaccgcctg gctgaaggcc
      361 aaccatccgg aggtgttcat cgccgcgtgc atgagcctgg cgatcaacaa caccgaccgg
      421 ctggcggcgc tgaagcagga ggcggagcgt gggtcgatca agatcctgcc gcccgatatc
      481 aaccggtcgg ccgccgattt ctcggtggag cggatggagg atggccggct ggcgatccgc
      541 tacgctctgg cggcggtgaa gaaggtcggg ttctcggcga tggaatcggt ggtggcggcg
      601 cgcgatggcg tttcgttcga ggacgtgacg gatttcgcga cgcgggtcga tccgcggcag
      661 atcaaccgca tgcagatcga aaacctggtg cgggccggcg cgttcgaccg gctggacggc
      721 aatcgtgccc gattgttcgc cggggccgaa acggttttac ggcgggcgca ggctgatcgg
      781 gaggaaaagg aaagcgggca gatcggtctg ttcggcggcg tcgccagcaa gccggaaccg
      841 ttgcgcctgc cggacgttcc cgactggccg ccgctggagc ggctggcgtt cgaggccgag
      901 gcgatcgggt tccatttgac ggcccatccg ctggatgcct atgcgcaggc gttgaagcgg
      961 ctgggtgtca cctcgtctat ccacgtcgaa tcccgcgccg ccaacggtgt tacccgggtc
     1021 aagatcgcgg gcacggttgt tgcgaccaag gaacgcatca cccgcaccgg cagccgcatg
     1081 gcctgggtgc ggatttccga cgcctccggc tcggtcgagg tcacctgttt cagcgaggtc
     1141 ttgtcccggt cgcgcgaaac actggcgcat ggctcgaacg tgctggtgac ggcggaactc
     1201 aaggtcgagg gagaggcagt ccgtgtcacc gcgcaggagg ttgcactgtt ggatgaggcg
     1261 gtagcctcca cgggcgcatc gatccgcatc tggctgcggg agaccgaaac ggtgccgcac
     1321 atccgcgacc tgctcgcccg tcagggtggc ggcaagggcc gtgtaatcct ggtgccgtgc
     1381 atcgatgacg aacggagcgt ggagattgct ctaccgggcg gttacagtgt gacacctcgc
     1441 ctcgcgcagg cactgaccag cctgccggga gtcgagcggg tcgacgaggt gtgatcgatc
     1501 agggttcgct cagcacagag tggccgaacg aaacgccaac ggagatcgac agcatcgccc
     1561 aggagattgc gacgatcgcg attggccgag gcaggcaata cagcatgcac gcggccatga
     1621 tcagcagccc cgccacacac gtcgccagta atctgggcac ataatcgtcg tcgtagttcg
     1681 tcatggttca gtccccctta tcggcacaac atccccatgt tgcccgttcg accactgcgc
     1741 gacgcgggct tcacacccgt ctggcattgt attcccatgg tatgcacatc gcatgccgta
     1801 ggaaataacg ccttttaatc aataagctac gaaaatagat taaccaaaag tgaggaggaa
     1861 tgtaaagaat tccgacagtt gcatgacagt ttaccgcttc ggtgccgggc gcctgctaac
     1921 gacgtggcct attcgactgc ctgatcctgc atttgctggt atgccccaac caatccccgg
     1981 gcaaagtcga atgcttcgaa tgggcgaagg tcggatgcct gttcgcccac gccaaccgca
     2041 tgcaccggca atccgaaggt ttcggccaac gccacc
//
LOCUS       DATAVD010001743         2275 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3516246, whole genome shotgun sequence.
ACCESSION   DATAVD010001743 DATAVD010000000
VERSION     DATAVD010001743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3516246"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1078
                     /locus_tag="VHX39_33380"
     CDS             <1..1078
                     /locus_tag="VHX39_33380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX3996090.1"
                     /translation="TALYRIELPVPLSDSTHGTMTHFELVTVRARDVDGAEGVGYTYT
                     TGAGGAAVHALIDQGLRPVLIGADADLIEALWNKMWWRLHYGGRGGSVSLAVSAADIA
                     LHDLMARRLGVPLWRMLGGFDPLVPCYAGGIDLEFTLDALLKQTDGNLDKGFRAIKMK
                     VGRPRLSEDAERVKAMRAHLGVVFPLMADANMRWTVDESIRAARAFRDSNLIWLEEPT
                     IPDDIAGHTRIVREGGVPIATGENLHTLHEFTQMISAGAVTFPEPDVTNCGGITVFMK
                     VAHLAEAYNLPVTSHGAHDLTVHLLAALPNRSYLEVHGFGLDRYIERPIVIREGVALA
                     PDTPGHGVAFDWKALDKVREGGTP"
     gene            1075..2040
                     /locus_tag="VHX39_33385"
     CDS             1075..2040
                     /locus_tag="VHX39_33385"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3996091.1"
                     /translation="MTDTRPFDPALFRADAIAPDTATLNEQMIQLLTGLPEWWVMGPA
                     EFRAARRRGEGPFPAPVMSARARTIVITGKDGNEIPLRVIAPASPRGIYLHIHGGGWV
                     LGGADMQDPMLERIADNTGQAVVSVEYRLAPEDPYPAGPDDCETAAAWLVQNGLQEFG
                     TDALTIGGESAGGHLSAVTVLRMRDRYGYTGFRGANLVYGAFDMSLTPSQRQFGNTRL
                     VLRTIDIQQFYNAFLPTGIERRVPDISPLYADLHGLCPALFSVGTKDALLDDTLFMHA
                     RWVAAGNEAELAIYPGGAHGFTLFPNDLSKAASAKMDVFLNRVLG"
     gene            2054..>2275
                     /locus_tag="VHX39_33390"
     CDS             2054..>2275
                     /locus_tag="VHX39_33390"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3996092.1"
                     /translation="MEFQIEAQQREMIASVRQLAQTEFKPDAHRWMDGTFPWENMRKL
                     ANLGVLGMSVPEEYGGLGLPILDTALILEE"
BASE COUNT          409 a          635 c          762 g          469 t
ORIGIN      
        1 caccgcgctg taccggatcg aactgcctgt gccgctgtct gactcaacgc acggcacgat
       61 gacgcatttc gagctggtga cggtccgggc gcgggacgtc gatggcgcgg agggagtcgg
      121 ctacacatac accaccggcg cgggcggcgc ggcggtgcat gcgttgatcg atcaggggct
      181 gcgtccggtg ctgatcggag ccgatgccga tctgatcgaa gcgctgtgga acaagatgtg
      241 gtggcgcctg cattatggcg ggcgcggcgg atcggtcagt ctcgcagttt ccgccgccga
      301 tattgctctg cacgatctga tggcccggag gttgggcgtt ccgctgtggc gcatgctggg
      361 tggtttcgat ccgctggtgc cttgttacgc gggcgggatc gatctggaat tcaccttgga
      421 tgccttactg aaacaaactg atggcaatct ggataagggc tttcgtgcca tcaagatgaa
      481 agtcgggcgt ccccggcttt ccgaagacgc cgagcgggta aaggccatgc gggcccatct
      541 cggtgtcgtt tttcccttaa tggcggatgc caacatgcgg tggacggtgg acgaatccat
      601 ccgtgcggcc cgcgcgttcc gtgacagcaa tctgatctgg ctcgaggaac cgaccattcc
      661 cgacgacatc gccggccaca cgcggatcgt gcgtgagggt ggcgttccga ttgcgactgg
      721 cgagaacctg cacacattgc acgaattcac ccagatgatc tcggccgggg cggtgacgtt
      781 cccggagcct gacgtcacca actgcggtgg catcacggtg ttcatgaaag tcgcgcattt
      841 ggccgaggcg tataatctgc cggtgacatc gcacggcgcg cacgacctga cggtgcattt
      901 gctcgcggcg ttgcccaacc ggtcgtacct ggaggtgcat gggttcggcc tcgatcgtta
      961 catcgagcgg ccgatcgtca ttcgcgaggg tgtcgccctt gcgccggata cacccggaca
     1021 tggcgttgcc ttcgattgga aggcattgga caaggtgcgg gaaggaggca cgccatgacc
     1081 gacacaaggc cattcgaccc ggctctgttc agggctgacg ccattgcgcc cgatacggcg
     1141 acgctgaatg agcagatgat ccagttgctg accggtctgc cggagtggtg ggtcatggga
     1201 ccagcggaat tccgtgcggc acgtcgccgt ggcgaaggcc cgttcccggc tccggtcatg
     1261 tccgctcgag cgcgcaccat cgtgatcacc ggcaaggacg gcaatgaaat tccgttgcgc
     1321 gtgatcgcgc ctgccagtcc acgggggatt tatctgcata ttcatggcgg cggttgggtg
     1381 ctcggcggtg ccgacatgca ggatccgatg ttggaacgca ttgccgataa tacgggtcag
     1441 gcggtggtca gtgtggaata tcgactggct ccggaagatc cctatccggc tggtccggac
     1501 gattgcgaga ccgcggcggc ctggctggtg caaaacgggc tgcaggaatt tggcaccgac
     1561 gcgttgacca ttggcggcga gtcggccggg ggtcatttgt cggccgtcac tgtgctgagg
     1621 atgcgggacc gttacggtta taccggcttc cgcggtgcga acctcgtcta tggcgctttc
     1681 gatatgagcc tgacacccag tcagcggcag tttggcaata ccaggctggt gttgcgaacg
     1741 atcgatatcc aacagtttta caatgcattt ttgccgaccg ggatcgagcg gcgggtgccg
     1801 gatatctcgc cgctatacgc cgatctgcat ggcctgtgtc cggcgctgtt cagtgtcgga
     1861 accaaagacg ctttgctcga cgatacgttg ttcatgcatg cgcgctgggt tgctgccgga
     1921 aacgaggcgg aactggcgat ctatcctggc ggggcacacg gcttcacgct gttccccaat
     1981 gatttgtcga aggccgcgtc ggcaaagatg gacgtttttc tgaaccgcgt gcttggctga
     2041 aggatcgtaa acaatggaat ttcagattga agcccagcag agggaaatga tcgcatcggt
     2101 acggcagttg gcgcagaccg agttcaagcc cgatgcgcac cgctggatgg atggcacgtt
     2161 tccctgggag aacatgcgga agctggccaa tctcggcgtg ctcggcatgt cggtgcctga
     2221 agagtacggc gggcttggcc tgccaatcct ggacaccgcc ctgatcctgg aggag
//
LOCUS       DATAVD010001744         4718 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1465289, whole genome shotgun sequence.
ACCESSION   DATAVD010001744 DATAVD010000000
VERSION     DATAVD010001744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4718
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1465289"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2366)
                     /locus_tag="VHX39_33395"
     CDS             complement(<1..2366)
                     /locus_tag="VHX39_33395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996093.1"
                     /translation="MIRPFALLAGAIIVTLAGSVFAATPDPPSARTAVRSGNHPGFGR
                     IVIDTDRKAFYHLTQDGDHVKIHFDGDVMLGNPPAPPRNVITITTDGATADLTLVKGT
                     RLHRMRLGGRIVLDVLDAPDDAPPPLKTRRTETSHAHPSPAMISAPEQDNRPPAAPSA
                     PATAATAQSPPAAVPPGDSPHNPTPAAQVPVEAKPLPPPAASAPGAGVIIETQQTPPG
                     RDVMPENAGPLGLLARRIRLPKDMDGSAFLVPFDGTTAAAAFHSGDSDYVVFDELRPV
                     DMSQLRNDPVFRTATVRLLANGTLLRVPLPPNQSMALTQMPRGWRVAALTTEPKQQPI
                     AVSATDGQLNLTAEQSGNVVSLADPDTGATLLVGTQHRSGQGLVVNRRSTEFILRPTI
                     QGVVVEPLSDAVTLRHIPTGFTVQGGPAGLALSPRTGDTNALMDAAHLTRRFDFSTMP
                     TAALLRQANRQIAEAAALPPMARGLKERGAAESFLALGLSAEAESLLHMAAAQDPAQA
                     ASAETGALTAVAALLAGRPEEANALADARLDGTDEIALWRAVRQAMRDDGSPGAAAIF
                     ATTAPLAFQYPKPIRDHIMPLIVETMIKGGEIAAAERLLDQSKDDPKLAYARALMQQS
                     NGNTAKALDMLDALANGNDRFDRARAVVRAVELRLATRKLDKTQAADALEKLLYAWRG
                     DAQELALRERIADLRGQTGAWRVALATLRQARIDFPEQGAAIQQRMKNTFADMIRDQN
                     EQHTSPIDFVTTVDENADVALDTGDDDALQQALADRLLALDLPDRAKP"
     gene            complement(2366..3016)
                     /locus_tag="VHX39_33400"
     CDS             complement(2366..3016)
                     /locus_tag="VHX39_33400"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019012773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0050920 - regulation of chemotaxis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HEX3996094.1"
                     /translation="MLDVPNDPHLIGIEALKQKLAAIRSQQPQIEPGMITEVVRAVLT
                     TISDDLTAKESSLLREVEELGQMIANTKSEIAALRVDDITDHDIPFATDELDAIVEHT
                     AHATDAILESCEMLDEVSATVSGDAAAKLQAATTKIYEACSFQDITGQRITKVVTTLK
                     TIEGKVAHIVSTFGKTAAEARVAADHVTTDADLLNGPQLPAHAMDQSDIDKLLADF"
     gene            complement(3009..3395)
                     /locus_tag="VHX39_33405"
     CDS             complement(3009..3395)
                     /locus_tag="VHX39_33405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator CheY"
                     /protein_id="HEX3996095.1"
                     /translation="MPIDKSMNVLIVDDYKTMLRIIRNLLKQIEFNNVEEASDGADAL
                     SKLRGGNFGLVISDWNMAPMTGLQLLQEVRADNRLKSTPFIMITAESKTENVIAAKAA
                     GVSNYIVKPFNAETLKDKIEKVLGHA"
     gene            complement(3421..4125)
                     /locus_tag="VHX39_33410"
     CDS             complement(3421..4125)
                     /locus_tag="VHX39_33410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996096.1"
                     /translation="MLKIPAPRLLPATIATLAALLVLKCVVLVQAVVTNDVTSGGAMV
                     TVANAASSDQTREPAKPAAAQQKPPAPAAPASPPAAPPPMSDSERSLLQDLRQRRQEL
                     DARAVALKTRESMLVAAEQKLSARLEQLQALQKKLEYLDAAQQQKEEAGWQGLVKLYE
                     VMKPKDAATIFNDLSMPVLLQLMDRMKDAKAALVMAAMNTDKAREVTDQLARMRTGRN
                     VSGAPVAGPNGNRAGG"
     gene            complement(4125..4544)
                     /locus_tag="VHX39_33415"
     CDS             complement(4125..4544)
                     /locus_tag="VHX39_33415"
                     /inference="COORDINATES: protein motif:HMM:NF039465.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6468 domain-containing protein"
                     /protein_id="HEX3996097.1"
                     /translation="MEWALEIVLVVLLAATLFQAIRLERALGVLKRDRSSLESLVVGF
                     NASTHHAESGIQRLRAAADGAGRQIENQLTKSIALKDDLSYLTERGERVADRLDTLVR
                     AARPLARERSAGMANSEEPKGPSQVEKNLLHALRLAR"
BASE COUNT          739 a         1489 c         1512 g          978 t
ORIGIN      
        1 attggcttgg cccggtcggg cagatcaagg gcgaggaggc gatccgccag tgcctgctgc
       61 agggcgtcat cgtcgccggt gtcgagagcc acatccgcat tctcatccac tgtggttacg
      121 aagtcgatcg gcgaggtatg ctgttcgttc tgatctcgga tcatgtcggc gaacgtgttc
      181 ttcattcgct gctgaatcgc ggcaccctgt tcggggaaat caatccgcgc ctggcgaagc
      241 gttgctagcg ccacgcgcca agcgccggtc tgtccgcgca ggtcggcgat ccgctcgcgc
      301 aacgccaatt cctgagcatc gcctcgccag gcatagagga gtttctccag cgcgtccgcc
      361 gcctgggtct tgtccagctt gcgggtcgcc agacgcagtt cgacggcgcg gaccacggcg
      421 cgggcccggt cgaaccggtc gtttccgttc gccagcgcat ccagcatgtc cagcgctttc
      481 gcggtgttgc cgttggactg ctgcatcagg gcgcgtgcat aggccagctt cggatcgtcc
      541 ttgctttggt ccagcagacg ttcggccgcg gctatttcac cgcccttgat cattgtttcg
      601 acgatcagcg gcataatgtg atcacggatc ggtttgggat actggaaagc caggggggcg
      661 gtcgtcgcga agattgccgc tgcgccgggt gagccgtcat cccgcatcgc ctggcgcacc
      721 gcgcgccaca gggcgatctc gtcggtgccg tccaaccttg cgtccgccag cgcgttggct
      781 tcctctgggc ggccggcgag caaagccgcg accgcggtca acgccccggt ttccgccgaa
      841 gccgcctgcg cgggatcttg agcggccgcc atgtgcagca aactctcggc ctcggctgac
      901 aggccgagcg cgaggaaact ttcggcagct ccccgctctt tgaggccccg ggccatcggt
      961 ggtaacgcgg ctgcctcggc gatttgcctg tttgcctgcc gcagcaaggc ggcggtgggc
     1021 atggtcgaga aatcgaaccg tctggtcaga tgcgccgcat ccatcagcgc attcgtgtcg
     1081 cccgtccgcg gcgatagcgc aaggccggcg ggaccgccct gcacggtaaa tcctgtcggt
     1141 atatgtctca gcgtgaccgc atccgaaagc ggctcgacca cgacgccctg tatcgtcgga
     1201 cgcagaatga attcggtgct ccgccggttg accaccagcc cctggccgga gcggtgctgg
     1261 gttcccacca ggagcgtggc cccggtatcg gggtcggcaa ggctgacgac gttgccggat
     1321 tgctccgccg tcagattgag ttgcccgtct gtcgcggata cggcgatggg ttgctgtttc
     1381 ggttcagtcg tcagggccgc tacgcgccag ccgcgtggca tttgcgtcag ggccatcgac
     1441 tgattgggcg gcagcggcac acgtagcaat gtgccgttcg ccagaagccg caccgtcgcc
     1501 gtgcggaaaa ccgggtcgtt tcgtagctgg ctcatgtcca ccggacgcaa ctcgtcgaac
     1561 acgacgtagt cactgtctcc gctgtggaaa gccgcggcgg cggtcgtgcc atcgaatggc
     1621 accaggaagg ccgatccgtc catgtctttc gggagtctga tccgccgggc cagaaggcca
     1681 agcgggccgg cgttttccgg catgacgtcg cgtccgggcg gcgtctgctg ggtttcgatg
     1741 atcacgcccg ccccgggagc ggatgcggcg ggcggcggca gcggcttcgc ctccaccgga
     1801 acctgcgccg ccggggtcgg gttgtgtggc gaatcgccgg gcggtaccgc cgcgggtggc
     1861 gattgcgctg tcgccgccgt tgccggcgcg gagggggcgg ccggcggccg gttgtcctgt
     1921 tccggtgccg atatcatcgc tggagatgga tgggcgtgcg aggtttctgt ccgtcgggtt
     1981 ttcaggggcg gtggcgcgtc atctggtgca tccagcacgt cgaggacgat gcggcccccc
     2041 agccgcatac ggtgcagtct ggtgccttta accagcgtca gatcggcggt cgccccatcg
     2101 gtggtgatcg tgatgacgtt gcgcggcggg gccggcggat tgcctagcat cacatcgcca
     2161 tcaaaatgga ttttcacatg gtcgccgtct tgcgtcagat ggtagaaggc cttgcgatcc
     2221 gtatcaatta cgatccgtcc gaagccggga tggttgccgg aacgaacggc ggtgcgcgcg
     2281 ctcggcggat ccggcgtcgc ggcaaaaacc gaaccggcca gcgtgacgat gatcgcaccg
     2341 gccaggagcg cgaacgggcg gatcatcaga aatcggccag caacttgtcg atatccgact
     2401 gatccatggc atgggccgga agctgcgggc cgttcaacag gtcggcgtca gtggtgacat
     2461 gatccgcggc gacccgagcc tccgcggcgg tcttgccgaa agtgctgacg atgtgggcga
     2521 ctttgccttc gatcgtcttc agcgtggtca ccaccttggt aatccgctgc ccggtaatgt
     2581 cctgaaagct gcaggcttcg tagatcttcg tcgtcgccgc ctgtagcttc gccgccgcat
     2641 caccgctgac ggtcgccgat acctcatcca gcatctcaca gctttcaagg atggcgtccg
     2701 tcgcatgcgc ggtgtgctcg acgatcgcat ccagttcgtc cgtggcgaac gggatatcat
     2761 ggtcggtgat gtcgtccacg cgcagcgcgg cgatctccga cttggtgttg gcgatcatct
     2821 gtcccagttc ctcgacttcg cgcagaagag aggattcctt ggcggtcagg tcgtcgctta
     2881 tggtggtcag cacggcacgc actacctccg tgatcattcc cggttcgatc tggggctgct
     2941 ggctccggat cgccgcgagt ttctgtttca gggcttcaat gccgatcagg tgcggatcat
     3001 tcgggacatc aagcatgacc aagcactttt tcgatcttgt ccttgagcgt ctcggcgttg
     3061 aacggcttga caatgtagtt ggacacaccg gccgccttgg ccgcgatcac gttttccgtc
     3121 ttgctctcgg ccgtgatcat gatgaacggc gtgcttttca gccgattgtc ggcgcgcact
     3181 tcctgcagaa gctgcaagcc ggtcattggc gccatgttcc agtcgctgat caccaggccg
     3241 aaattgccgc cgcgcaactt ggacaacgcg tcggcaccgt cggaggcttc ctcgacgttg
     3301 ttgaactcga tctgcttcag caggttgcgg atgatccgca acattgtttt gtaatcgtcc
     3361 acgattagaa cattcatgga cttgtcgatc ggcatgttac actctccttt gcatctgaaa
     3421 ttacccgccg gcacgattgc cgtttggtcc cgcgaccggt gcccccgaga cattccggcc
     3481 ggttcgcatc cgcgccagtt gatctgtcac ttcgcgtgcc ttgtcggtgt tcattgccgc
     3541 catgaccaag gcggccttgg cgtctttcat ccggtccatc aattgcagca ggaccggcat
     3601 cgacaagtcg ttgaagatcg tcgcggcatc cttgggcttc atgacctcgt acagcttgac
     3661 gaggccttgc cagccggctt cttctttctg ttgctgcgcg gcgtccaggt attcaagttt
     3721 cttctgcagc gcctgcaact gctccagccg cgcggacagt ttctgttcgg ccgcgaccag
     3781 catggattcg cgcgtcttca gcgccaccgc tctcgcgtcc aattcctgcc ggcgttggcg
     3841 gaggtcttgc agcagggacc gctcactgtc gctcatcggc gggggggcgg ctgggggcga
     3901 ggccggcgcc gccggggcag gcggcttctg ctgcgctgcc gccggcttgg ctggttcccg
     3961 ggtctgatcg gaactcgcgg cgttcgcgac ggtgaccatc gcgccgcctg acgtcacgtc
     4021 gttggtcacc actgcctgca ccaggacgac gcacttcagt accagcaacg cggccaaagt
     4081 ggcgatcgtg gccggcagca gtcggggcgc gggaattttc agcatcagcg ggccagccgc
     4141 aacgcgtgca gcaggttctt ctcgacctgg ctggggcctt tgggttcttc ggaattcgcc
     4201 atgccggccg agcgctcccg cgccagcggc cgagccgctc ggaccagggt atcgagccgg
     4261 tcggcgaccc gttcgccgcg ctccgtcaag tatgacaggt cgtccttcag ggcgatggat
     4321 ttcgtaagct ggttctcaat ctgacggccg gcgccatccg cagcggcgcg cagacgctgg
     4381 atgccgcttt ccgcatggtg ggtgctggcg ttgaagccca ccaccaatga ctcgagtgag
     4441 gaccgatcgc gcttcaacac gcccagcgca cgttccagcc tgatggcttg aaacagggtc
     4501 gctgccagca gcacgacgag aacgatttcg agggcccact ccatggcgtc caccgtaccg
     4561 gtcaaatatt aacaaatgat ttagcgaatt ctaaaaacga tcggacgccg gcgtccgtat
     4621 gagttcgcgt tcgatcttga ccgcgacgtt gttattcttc tgtcccatcc gaccctcgaa
     4681 cagcgccact ggaccacatc ttaccgatac ggcgcctc
//
LOCUS       DATAVD010001745         4209 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2213006, whole genome shotgun sequence.
ACCESSION   DATAVD010001745 DATAVD010000000
VERSION     DATAVD010001745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4209
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2213006"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..769
                     /locus_tag="VHX39_33420"
     CDS             <1..769
                     /locus_tag="VHX39_33420"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEX3996098.1"
                     /translation="NHGNSGGPLFNMSGEVIGMNSVIFSPDPASAGIGFAIPSSSLKF
                     VYERLMKTGKINGGMLPIHTQEVTWMLQQALGTPDLLGALVTSVQDPHGTMLEGKIEA
                     GDVIRMFNGETVLDPRGLARMAAHAPIGSDAALVITRHGTMETVHVTLQAIPEGIPPV
                     LDDDGPRTLGLDLVSEQQGNGAQMVKVASVDPSGTAASSGIQKGDMILEVQQTPVSEP
                     DQALRVFWAQSSLKQKFAAVLVEHQEKIAWMSLAIPE"
     gene            1149..1397
                     /locus_tag="VHX39_33425"
     CDS             1149..1397
                     /locus_tag="VHX39_33425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996099.1"
                     /translation="MKTHPDIARHHPNSGVPGHVSPTFVDVSATTAPARQTVTSTPLV
                     DGAAMPPGAPTPAPIALSAGVKSWARIGHLIQVPGSYL"
     gene            1511..2488
                     /locus_tag="VHX39_33430"
     CDS             1511..2488
                     /locus_tag="VHX39_33430"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEX3996100.1"
                     /translation="MFTPVAGSDQSLEGPLAQIIHHEGRWFDKPGGGVVGLPLPRISA
                     SRWTGYAEEPCEQEAEIEPDCHVIGITLQPLEDVTIFAARKLIHTGPLQAGSTRVYEP
                     GLPMRGIFRGSYDALHLHVPNAMIAEYAAESANVGCSQRHLTALTYDRPIVDPVIERL
                     AQALIHAEQLGGAFGQSYADGISLAITAQLFGGNSDGAPTHRPRVAGLSKWRLKRAKE
                     YMEANLAEPISLADIAAATGLSRMHFAAQFRAATGLRPHEYLLQRRIERARELLLTSR
                     LPLVEIAFDVGFKTQAHFTTVFARFVGETPNAWRQRNQGALDTVMQKAA"
     gene            complement(2513..2779)
                     /locus_tag="VHX39_33435"
     CDS             complement(2513..2779)
                     /locus_tag="VHX39_33435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996101.1"
                     /translation="MTQINASVRNTCDTVVERIRVSVVPTELPEFLPDARRLVALALY
                     HRTRADRSGCQAEQREHHRIADIYEVLATIDLPISALAEIAGRQ"
     gene            3091..>4209
                     /locus_tag="VHX39_33440"
     CDS             3091..>4209
                     /locus_tag="VHX39_33440"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX3996102.1"
                     /translation="MSEPGRNLVYESGLWQVHLDRRELLAGGLPVPLGARAFEIVEVL
                     VRSNNELVSKDDLMGRIWPGAVVGDNTLQVHISAIRKALGRDRALLQTASGRGYRLLG
                     SWTISGQQAAAPPIALQQIRATRKTATTNFPAAVTSLVGRSAALQRVRDLVSAYRVVT
                     LVGPGGIGKTTLALEVARDLLDGFHGGGWLVELGSLSDPELVPSAVAGVLDLNISGET
                     ISPGAVARAIGGQHLLLVLDNCEHVIDAVANLTELLVRSCPQTTILATSREVLRTDGE
                     YVYRVSPLEVPAAEAVDPNHILQHSAIELFITRTKAQASDFSPRPEDLRSIAAICRRL
                     DGIPLAIEFAAAHTATLGIQQVAAGLSDRFALLTGGRRT"
BASE COUNT          851 a         1309 c         1278 g          771 t
ORIGIN      
        1 caatcacggc aactccggtg gtccgctttt caacatgtcg ggagaggtca tcggcatgaa
       61 cagcgtcata ttttcaccgg atcccgcgtc tgccggaatc ggtttcgcca taccgtcgag
      121 cagtctcaag ttcgtctacg aacgcctgat gaagactggc aagatcaacg ggggcatgct
      181 gccaattcac acccaggagg tcacctggat gctgcaacag gcacttggta caccggatct
      241 cctgggtgcg ctcgttacat cagtacaaga tccgcacggc acgatgctgg agggcaagat
      301 cgaggccggc gatgtgatcc ggatgttcaa cggggaaact gtcctggatc cccggggtct
      361 ggcacgcatg gctgcccatg cgccaattgg cagtgatgcc gcactggtta ttacccggca
      421 tggcacaatg gaaactgtgc acgtcacgct ccaggccata cctgagggaa taccgcccgt
      481 tctcgacgat gacggaccgc ggacactcgg tctggatctc gtctccgagc agcagggtaa
      541 tggtgcacag atggtgaaag tggcctcggt ggatccctcc ggaacggccg ccagtagcgg
      601 aattcaaaaa ggcgacatga tcctcgaggt tcagcagaca ccggtctcgg agccggacca
      661 ggcactacgt gtcttctggg cccagtcgtc cttgaagcag aaattcgcgg cagtcctggt
      721 ggagcaccag gagaaaatcg cctggatgtc gcttgccatc ccggaatgaa acaattcgta
      781 acggcgacca aagcatctgc tccgaccgcc ggataatacc cgggcaacat tcgatcatgg
      841 cgaagatggt gcaccgattc tgagcggttc gcatctggcc atggatgcct ggacgagtgg
      901 tcgccgtccg cctggcctct tgcccgttca gagttctatg aagtgatggc acccggggtt
      961 ttcctgaaca atccttaaaa ggctgatcgg caccccgaaa ttgccagaca tcaacctgtt
     1021 gccggcgtgc gaaaaaggac cgggagaaca cgatccgaag agtgccaggc gcggggaacc
     1081 gcggtccgtg gccggcatcc gcttcaggat ctgcggtagc agatacggtg tgaccggatc
     1141 accgcaccgt gaagacacat cccgacattg ccaggcatca tccaaactcg ggcgtcccag
     1201 ggcacgtttc gcccacattt gttgacgttt cggcgaccac cgcaccggcc cggcagactg
     1261 tgaccagcac gccgctggtc gacggcgcgg cgatgccgcc cggcgcgccc acgccggcgc
     1321 cgatcgccct ctctgcgggc gtgaagtcct gggctcggat cggccacctg attcaggtgc
     1381 caggatcata cctttaagga cggcagcaag tttttaggaa atttcagcag aaccccaagg
     1441 aatccgccgt cgcggtcgcc taatttgaca ctgcggggaa aaataatccc gcgtgggatg
     1501 gaggtatcac atgttcacgc cggtggcagg atccgaccag agtctcgagg gcccgctcgc
     1561 tcagatcatc catcatgaag ggcgatggtt cgataaaccc ggtggcggcg tggtcggtct
     1621 cccgctaccg cggatctcgg cgtcgcggtg gacaggatac gcggaagagc cgtgcgagca
     1681 ggaggcggag atcgagcccg attgccatgt tatcgggatc acgcttcagc cgctggaaga
     1741 tgtgacgata ttcgccgcgc gaaagctgat ccacaccgga cctttgcagg caggcagcac
     1801 gcgagtgtac gaacctggcc taccgatgcg ggggatcttc cggggatcgt acgacgcgtt
     1861 gcacctgcat gtcccgaacg cgatgatcgc cgaatacgcc gccgaatccg ccaatgtggg
     1921 atgtagtcaa aggcacttga ccgcactgac ctacgaccgc ccgattgtcg acccggtgat
     1981 cgagcgtttg gcacaggccc tgatccatgc cgaacagttg ggtggcgcat tcgggcaaag
     2041 ctacgccgac ggtatcagtc tcgccatcac cgcccagttg tttggcggaa attcggatgg
     2101 ggcgccgacg catcgtccac gcgtggcagg gctctccaag tggcgtctga aacgcgcaaa
     2161 agaatacatg gaagccaatc tcgccgagcc gatcagcctc gctgatatcg cggcagccac
     2221 cggactatcg cgcatgcatt tcgcagcgca attccgggcg gcaaccggcc tgcggccaca
     2281 cgagtacctg ctgcaacggc ggatcgagcg cgcccgggag ctgcttttaa cctctcggct
     2341 gccgttggtg gaaatcgcat tcgatgtcgg cttcaagacg caggctcact tcaccaccgt
     2401 gttcgcccgg tttgtggggg aaacaccgaa cgcgtggcgc cagcgcaacc aaggggctct
     2461 ggacaccgtt atgcaaaaag ctgcctgagg atcaacaccc tttgctgtct gcttattgcc
     2521 ggcctgcaat ctcggccaag gcagagatgg gcaggtcaat ggttgccaaa acttcatata
     2581 tatcagcgat tcgatgatgc tcgcgttgtt ccgcctgaca tccggaacgg tccgcccgag
     2641 tacggtgata gagcgccaat gcaacaaggc gccgagcatc gggcaggaac tcaggtaatt
     2701 cggttggcac gacgctcact ctgatccgtt caacaaccgt atcgcaggtg ttccgcacgg
     2761 atgcgttgat ctgggtcaag caagcgtcct gacgtcagcc aaaaaattca gccaggcaca
     2821 catacttcat catgcggata gcacggcaca ttcaagcaat tgccgcggtc tcccgccaaa
     2881 attcctgcga tcgctgcgac gacaggtccc acgccggccg acccaaggct cagcgaagca
     2941 atcgatatcg ccgcccggac tgcacggctg gcccgccatg cgatcgagca aatcgaaacc
     3001 cggaccaacc ggccgcgggg ttgcggaaac ccgctctacg ggccagtttt caggaatagc
     3061 tgaaaattcc tgaagcgggg gagcgccgcg gtgtccgaac cgggccggaa cctggtttat
     3121 gagtcgggtc tgtggcaggt ccatctcgac cggcgcgaat tgctggcggg tggccttccg
     3181 gtgccgcttg gcgcgcgtgc gttcgagatc gttgaagtgc tggtgcggtc caacaatgaa
     3241 ctggtctcca aggacgatct gatgggccgc atctggccag gtgccgtggt cggggacaac
     3301 acgcttcagg ttcacatttc cgcgatccgc aaagcgcttg gccgggatcg agccttgctg
     3361 cagaccgctt ccggccgcgg ctatcgcctg cttggcagct ggaccatcag cggtcagcaa
     3421 gccgcggccc cgccgattgc cctccagcaa atccgggcca cacggaagac cgccaccacc
     3481 aatttccctg ccgcggtcac ctcgctcgtt ggccggtcgg ctgcgctgca gcgggtgcga
     3541 gacctggtct ccgcctaccg cgtcgtgacc ctcgtcgggc caggcggaat cggcaaaacg
     3601 acgctggccc tggaggtcgc ccgcgacctg cttgacggct tccacggcgg cggatggttg
     3661 gtcgaactgg gctcgctgtc cgatcccgag ctcgtgccgt ccgcggtcgc cggcgtgctc
     3721 gacctgaata tcagcggcga aacgatttcc cccggcgccg tcgcacgcgc cattggcggt
     3781 cagcatcttt tgctggtgct agacaactgc gagcacgtca tcgacgcggt tgcgaacctg
     3841 acggaactgc tcgtgcggtc ttgcccgcaa accacgatat tggcgaccag cagggaggtt
     3901 ttgcggaccg acggcgagta cgtttaccgt gtttcgccgc tcgaagtacc ggccgcagaa
     3961 gcggtggacc cgaaccatat cctgcagcac agcgcaatcg aacttttcat caccagaaca
     4021 aaagcgcagg cgtcggactt ttccccgcgc cccgaagacc tccgatcgat cgctgcgatc
     4081 tgccggcggc tcgacggcat accactggcc atcgaattcg ccgcggcaca caccgcaaca
     4141 ctgggcattc agcaagtggc cgccggtctg agcgatcgct tcgcgctgtt gaccggcggc
     4201 cgccggacc
//
LOCUS       DATAVD010001746         3873 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_913015, whole genome shotgun sequence.
ACCESSION   DATAVD010001746 DATAVD010000000
VERSION     DATAVD010001746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3873
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_913015"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1120
                     /locus_tag="VHX39_33445"
     CDS             <1..1120
                     /locus_tag="VHX39_33445"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3996103.1"
                     /translation="IKGWAAAEAPIIPKHIYDGTDPFTNPNNSAPIGTGPFRFKEYVR
                     GDHVVYERNNEYWDSPRPYLDQLVVKFIPDAAARSAALESGDVDLGYRTPVAYSDLDR
                     LRAAGKLLFETKGYEYNNNVNGLEFNLDSPILSKLPVRQAIAHAINTAAICKTVYYGT
                     FDPCAAPIAPYLAEYHDSEPFPYPYDIAASQKLLDEAGYPRGADGSRFHMTFDVSPGV
                     EEGRRLGDYLRASFARVGITLDVRLSDYGSYLKRIFTDRDFDMCCTGFSNIYDPSVGV
                     QRVYWSKNIIKGVPFSNTSYYRNPKVDALLEAAAIELDPAKRRAEFLEFQHLVMLDVP
                     DVNIGVPRWVTIYNKRAQGHSVTADGIEGNLAYAYIAS"
     gene            1345..2640
                     /locus_tag="VHX39_33450"
     CDS             1345..2640
                     /locus_tag="VHX39_33450"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03860.1"
                     /note="This protein belongs to a clade of FMN-dependent
                     monooxygenases, within a broader family of
                     flavin-dependent oxidoreductases, the luciferase-like
                     monooxygenase (LMM) family, some of whose members use
                     coenzyme F420 rather than FMN; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NtaA/DmoA family FMN-dependent monooxygenase"
                     /protein_id="HEX3996104.1"
                     /translation="MFHLGWFVGKGYSPHSWNQPWSGTIGTDWMEPDLYMDLARSLER
                     ACFDCLILEDGSFIADAYQNSPEWVLANAFAVPKSDPMPLVPLMGYVTKRIGIVPTCT
                     TSFYPPYLAARLGATLDHLTHGRVGLNVVTAHNDRSAQNYGLDRHYEHDLRYEMADEW
                     MEVVNRLWLSWEPGAIVANPETGVFADHRKIHPIHFEGRFYKCRGPLNTAPGPQQRPV
                     ICQAGGSSAGRVFAAKHADLIIAKNRDLSAAKQYREDITRLMAPHGRAAGDCKVLHCA
                     SVILGDTMEEAQEKRARLAAWMAEHMDVKLAGMSFLSGIDCSKFELDAPLPKLTLNTS
                     RASFEAHLSGDGSRTLREMLLDPGSGGIDFVGTADSIAADMGAVMEEIGGDGFLIQDA
                     VTRKAIVDVTDGLVPALRRRGLIREAYSHALFRDNLLDF"
     gene            2656..3843
                     /locus_tag="VHX39_33455"
     CDS             2656..3843
                     /locus_tag="VHX39_33455"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF023151.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX3996105.1"
                     /translation="MPDIEHDIKPSEMPYERFGIPKLGFENYWYPVLTAREVRGKPRA
                     VRLVGRDIVLFRDKGELFALDDRCPHRGVKLSAGKCDYAGTGTITCPYHGWTFDGASG
                     QLVAALMEGPDSPLTRKVAVRTYPVKEFGGLIWIWPGEMEPVALEDDVPEYVGHQDTF
                     FTIGMYTDYKCNWRALVDNWPSDHHAQMVHRNSPELMFQPILPFALTLEPKPLEGDKG
                     ISIKRIGGMTSADYPGLGSFPNKEWWRVMKPAGRGNTMGFEKSKAHAVYGIKNQSEVW
                     LPGLIIVGRLSGEYCLVQWAVPIDGETTRCFNVNSWRRLGRWREIYDRAHYYLWRGWA
                     HDHLFSDQDKTMVEALVPGPERLARTDTGVIAWRRFAGTHARRPADALPITEMAQDMA
                     AGE"
BASE COUNT          755 a         1162 c         1210 g          746 t
ORIGIN      
        1 gatcaagggc tgggccgcgg cggaagcgcc gatcattcca aaacacatct atgacggtac
       61 cgatccgttc accaatccaa acaacagcgc gccgatcggt accgggccgt tccgcttcaa
      121 agagtatgtc cgcggcgatc acgtggtcta cgaacggaac aatgagtatt gggacagtcc
      181 gcggccgtat ctcgatcagc tcgtggtcaa attcattccg gacgccgcgg cgcgctccgc
      241 cgcgctggaa tcgggagacg tggatctcgg ttatcgtact cccgtcgcgt acagcgatct
      301 ggatcggtta cgggccgccg gcaaactctt gttcgagacc aagggctatg aatacaacaa
      361 caacgtgaat ggcctggagt tcaatctgga ctctccgatc ctgtccaaat tgccggtgcg
      421 gcaggcgatc gcgcatgcga tcaacacggc agcgatttgc aagaccgtct attatggcac
      481 gttcgatccg tgtgccgcgc ctatcgcacc ctatctggct gagtatcacg attccgaacc
      541 gttcccctat ccgtacgaca ttgcggcgtc acagaaactg ctggatgagg ccggctatcc
      601 acggggcgcc gacggctcgc ggtttcatat gacgttcgac gtaagcccag gagtggagga
      661 gggccgacgg ttgggcgact atcttcgggc gtcttttgcc cgggtcggca tcaccctcga
      721 cgtccggctg tccgactacg gcagctatct caagcgcatt ttcaccgacc gcgacttcga
      781 catgtgttgc accggattca gcaatatcta cgatccgtcg gtcggcgtgc agcgggtcta
      841 ctggtcgaag aacatcatca agggcgtgcc gttctccaac accagctatt accgcaaccc
      901 aaaggtcgat gccttgctgg aggcagcggc gatcgaactc gacccggcga agcggcgagc
      961 cgaatttctg gagtttcagc atctcgtcat gctcgacgtt cccgacgtca acatcggcgt
     1021 gccgcgctgg gtcacgatct acaacaaacg cgctcaggga cacagcgtta cggcagacgg
     1081 gatcgagggc aatctggcgt atgcttatat cgcgagttga tacaatgagc agaccggcga
     1141 ccactggttg tcgggaaccg gtgcagtcac gttgcccaga aacgcatggg ggacgatctg
     1201 cggttcgcga tcgatccgac catcgcggcg gtgtcgacgt tgaccatcgc actgaccgct
     1261 tcgttgccgg cgggcgcgca tttcgcgcga cgctcgtgat ggcacggcgt ttgcccttac
     1321 accggtagtt gcgcgggagg atggatgttt cacctcggat ggttcgtcgg caaaggctac
     1381 tcgccgcaca gctggaacca gccatggagc gggaccatcg gcaccgactg gatggagccc
     1441 gatctctaca tggacctcgc gcgcagcctg gaacgcgcgt gctttgactg cctgatcctg
     1501 gaagacggtt catttatcgc cgacgcatat cagaattcgc cggaatgggt tttggccaac
     1561 gctttcgcgg tcccgaagag cgacccgatg ccgctggtgc cgctgatggg ctacgtgacg
     1621 aagcggatcg gcatcgtccc cacatgcacc accagcttct atccgcccta tttggcggca
     1681 cgtctgggtg cgaccctgga tcacctgact catggtcgcg tcggcctgaa tgtggtgacc
     1741 gcgcataatg accgatcggc gcagaattac ggtctcgacc ggcattacga gcacgatctt
     1801 cgttacgaga tggccgacga gtggatggag gtggtcaatc gcctgtggct gtcctgggag
     1861 cccggcgcga tcgtggccaa tccagaaacc ggcgtgttcg ccgaccatcg gaaaatccat
     1921 ccgatccatt tcgagggccg gttttataaa tgccgcggcc cgctgaatac cgcgccgggt
     1981 ccgcaacagc gaccggtcat ttgtcaggcc ggcggttcat cggccggccg tgtctttgcc
     2041 gcgaaacacg cagacctgat catcgccaag aaccgtgacc tctccgctgc gaagcaatac
     2101 cgcgaggaca tcacgcggct gatggcgccg catggccgcg cggcggggga ctgcaaggtg
     2161 ctgcattgcg cctcagttat tctcggcgac acgatggagg aggcgcagga gaagcgcgcg
     2221 cgtctcgccg cctggatggc ggaacacatg gacgtcaagc tggccggtat gtcgttcctg
     2281 agcgggatcg attgttcaaa gttcgagctc gatgcgccac tgccgaagct gacattgaat
     2341 acgtcgcgtg cctcgttcga agcgcatctt tccggcgatg gcagccgcac cctgcgcgag
     2401 atgctgttgg atcccggcag cggcggcatt gatttcgtcg gcaccgccga cagcattgcc
     2461 gccgatatgg gcgcggtgat ggaggaaatc gggggcgacg ggttcctgat ccaggatgcg
     2521 gtgactcgca aggcgatcgt tgatgtcacc gacggcctgg tgcccgcgct gcgccgccgc
     2581 ggcctgatcc gcgaggccta cagccacgca ctgttccgcg acaatttgct ggacttttga
     2641 acgggagcga acgccatgcc ggacatcgag cacgacatca agcccagtga aatgccgtat
     2701 gaacggtttg ggattccgaa actggggttc gagaattatt ggtatccggt gctgaccgcg
     2761 cgtgaggttc gtggcaagcc gcgcgcggtg cggttggtcg gccgcgacat cgtgctgttt
     2821 cgtgacaaag gcgaattgtt cgcgctggac gaccgctgcc cgcatcgcgg cgtgaaactg
     2881 tccgccggca aatgcgacta tgctggtacc ggaacgatca cctgccccta tcacggctgg
     2941 acattcgacg gcgcgtccgg gcaattggtt gccgcgctga tggaaggtcc ggactcgccg
     3001 ctgacccgca aggtcgccgt gcggacttat ccggtcaagg aattcggcgg tctgatctgg
     3061 atctggcccg gcgagatgga accggttgca ctcgaggacg acgttccgga atacgttggc
     3121 caccaggaca cattcttcac gatcggcatg tacaccgatt acaaatgcaa ctggcgcgcg
     3181 ctggtggaca actggccgtc cgatcaccac gcgcagatgg tgcatcgcaa ctcacccgag
     3241 ctgatgttcc agccgatcct gcccttcgcc ctgacattgg aaccgaagcc gttggagggc
     3301 gataagggca tctccatcaa acgcatcggc ggcatgacaa gcgcggacta tcccggcctc
     3361 ggctcgttcc ccaacaaaga gtggtggcgg gtgatgaagc cggcgggccg cggcaacaca
     3421 atgggctttg aaaaatccaa ggcgcacgct gtttacggca tcaaaaacca gtccgaggtc
     3481 tggctgcctg gtctgatcat cgtcggccgc ctcagcggcg aatattgcct ggtgcaatgg
     3541 gcggtaccga tcgacggcga aacgacacgc tgtttcaacg tcaacagctg gcgccggctt
     3601 ggccgctggc gggaaattta cgaccgcgcc cactattatc tgtggcgcgg ttgggcgcac
     3661 gatcatctgt tctccgatca ggacaagacg atggtcgagg cgttggttcc gggaccagaa
     3721 cgtctggcca ggaccgatac cggcgtgatc gcctggcgcc gttttgccgg cacccacgcg
     3781 agacggcccg ccgacgcgtt gccaataacg gagatggcgc aggacatggc agccggcgag
     3841 taaacgggcc gctcggtcag gacctgtcag tgc
//
LOCUS       DATAVD010001747         4620 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_169692, whole genome shotgun sequence.
ACCESSION   DATAVD010001747 DATAVD010000000
VERSION     DATAVD010001747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4620
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169692"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..685
                     /locus_tag="VHX39_33460"
     CDS             <1..685
                     /locus_tag="VHX39_33460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3996106.1"
                     /translation="VQAMQTIAEKITIVQEIARQTDLLALNAAVEAARAGEHGRGFAV
                     VASEVRKLAERSQAAAGEIGQLSASTVKAAQDAGQMLSRLVPAIKKTAELVTEISAAC
                     REQDVGTDQINQAIQQLDRVTQQNASASEQMSATSEELAAHAEQLQTSVAFFRMENGG
                     RNGPVHHPAVVTPPRRAAQASARPAKAASRPTPAQTHNGKDKSRSSGFNLNLGSGGAD
                     PRDADFERM"
     gene            702..1196
                     /locus_tag="VHX39_33465"
     CDS             702..1196
                     /locus_tag="VHX39_33465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HEX3996107.1"
                     /translation="MSVDTQFVTLGIDREVFAVPVDTVLEILDMRELFHVPEAPPHLA
                     GLLDVRGRSVPVIDLRVKLGLPSAAITEGTRIMVLEVPIAGRQLVLGLIADRVYEVAS
                     LDGGRLEPPPDIGTRWHSEYIAGVGRRGEHFVVVFNLGQLFASDEHAFINAAPHVSEQ
                     SAAA"
     gene            1223..3379
                     /locus_tag="VHX39_33470"
     CDS             1223..3379
                     /locus_tag="VHX39_33470"
                     /inference="COORDINATES: protein motif:HMM:NF024140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3996108.1"
                     /translation="MRITVKSKLGMAFAAVIVFSAITAGIGISSLASLNATIDELLKG
                     PVQRAALAELVYTNLLAISRAERSVLASPTAEMAKHYDDEIVDGRRTLQTHVGQLDAI
                     ESEAGKHKLTVFKEGWEKYVSLQNKFRDLVAHDKAQAIELSYDPLKHFVDDGKAQLTE
                     IADLNGQLMMQAEAGAVQQYQNSRMLLIITLVLSLVIAASTATWIALGISRAMSRASS
                     LAQAVAIGDLGQEVTVSSNDEIKDMVDALNQMTRSLRATASVADAIAGGDFTNDAKRL
                     SDKDTLGISLERMTANLRSTATVANAIAQGDLTSEVKRLSDKDSLGTALEHMTANLRA
                     TATFADAIADGDFSLEAKRRSSKDMLGIALERMTTNLRATAQIADAIADGNLTIIAKR
                     LSDRDMLGTALERMLDRLRTIVTDASAAADNVSSGSEELSSTATAMSQGATEQASAAE
                     EASASMEEMASNIKQNADNATQTEKIARQSALAAQKSGEAVDRAVHAMQTIAERIIIV
                     QEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQTAATEIGTVSSQTVK
                     AAQEAGSMLGLLVPDIKKTAELVAEISAACREQDIGADQINQAIQQLDKVTQQNASAS
                     EQMSATSEELAAQAEQLQSSIAYFRLDANGAGPVTPSPRSAQRRPVLPALLARPAKSA
                     AARPVSSANGRARQGGHTINLSGSGADPRDAEFERM"
     gene            3416..>4620
                     /locus_tag="VHX39_33475"
     CDS             3416..>4620
                     /locus_tag="VHX39_33475"
                     /inference="COORDINATES: protein motif:HMM:NF024140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3996109.1"
                     /translation="MRITVKAKLALAFSLVILLSAVSALVGITNLATLNTTMDNMVRG
                     PMQRVIASQESSEQLLTIVRAEKNVNLADTKDQLNSFETELSRLRSEYTLRLDQAVAN
                     ASVEGRPLWEAARGSWQQYALVQDKIIEAVNHDAKPEARALSLGSGRQHVTDARASLQ
                     KVVDLNRRRLNDATIDAGHEYETARLLLIAVVCVSLLVATATGFWIALGISRGLARAG
                     ALAQAVAGGDLTQTASVSSHDEIGDLIGHVNAMVERLRVVVSDASGAAENVSSGSEQM
                     ASTSEQLSQGATEQASAAEQASASMEQMASNIKQNADNATQTEKIARQSAVDARKSGE
                     AVANAVLAMQTIAEKITIVQEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLA
                     ERSQTAAAE"
BASE COUNT          993 a         1416 c         1462 g          749 t
ORIGIN      
        1 ggtgcaggcg atgcagacca tcgccgaaaa gatcaccatc gtgcaggaga tcgcccgtca
       61 gaccgatctg ctggctctga atgccgcggt cgaagccgcg cgtgccggcg aacatggccg
      121 cggttttgca gtcgttgcgt ccgaggtccg caagctggcc gaacgcagtc aggcagcagc
      181 cggggaaatc ggtcagctgt cagcgtccac cgtcaaagcc gcgcaggatg ccggccagat
      241 gctgagccgg ctggtgccgg ccatcaaaaa gaccgcggaa ctcgtaacgg agatcagcgc
      301 cgcgtgccgc gagcaggatg tcggcaccga ccagatcaac caggcgatcc agcagctcga
      361 tcgggtcacg caacagaatg ccagcgcatc ggaacagatg tcggcaactt ccgaggaact
      421 ggccgctcat gccgagcaat tgcaaacgag cgttgccttc ttccgcatgg agaacggtgg
      481 ccggaatggg ccggtccatc atccggcagt ggtaaccccc ccgcgacggg cggcccaggc
      541 gagtgcgcgg ccggcgaagg ccgcttccag gccgacgcca gctcaaacac ataacggcaa
      601 ggacaaatcc aggagcagcg gcttcaacct caaccttggc agcggcggcg ccgatccgcg
      661 cgatgccgat ttcgagcgga tgtaagacaa tggaccagga aatgtctgtc gacacccagt
      721 tcgttacgct tggcatcgat cgcgaggtat ttgcggtacc ggtcgacacc gtgttggaaa
      781 ttctcgacat gcgggaattg ttccacgtgc cggaggcacc gcctcatctt gccggtctgc
      841 tcgacgtgcg cggacgcagc gtgccggtga tcgatctgcg ggtgaaactt ggcctgccat
      901 cggcggcaat caccgagggc acgcgcatca tggtgctgga ggtgccgatc gccggacggc
      961 aactcgtgct cggactgatc gcggaccggg tttacgaggt tgcctcgctg gatggcggca
     1021 ggctcgaacc gccgccggat atcggcacga gatggcactc cgagtacatc gccggggtcg
     1081 ggcggcgcgg tgaacatttt gttgtcgtat tcaatctcgg acagttgttc gcgtccgacg
     1141 agcacgcgtt catcaatgcc gcgcctcacg tgtccgagca aagcgctgcc gcctgaccgt
     1201 cattgcctcg gagcaagcat gcatgcgtat caccgtcaaa tcgaagctgg ggatggcatt
     1261 cgccgccgtc atcgtgtttt cggcaatcac cgcaggcatc ggcatcagca gcctggcatc
     1321 cctcaacgcc acgatcgacg agttactgaa aggcccggtc cagcgcgcgg cgcttgcaga
     1381 gctggtttac accaatctgc tggcgatctc gcgcgcagaa cgaagtgtac tggcgtctcc
     1441 gaccgccgaa atggcgaagc actacgacga cgagatcgtg gatggtcgcc gaacgctgca
     1501 aacccatgtg ggtcagctcg atgcgatcga aagcgaagcg ggaaagcaca aactgacggt
     1561 tttcaaagaa ggctgggaga agtacgtttc gttacagaat aaatttcgcg acctggtcgc
     1621 gcacgacaag gcccaggcca tcgagctttc ctatgacccg ctgaaacatt tcgtcgacga
     1681 cggcaaagcg caactcaccg agatcgccga cctcaacggt cagctcatga tgcaagccga
     1741 ggcgggcgcg gtccaacaat accagaattc acggatgctc cttatcatta ccctggtctt
     1801 atcgctggtc atcgcagctt caaccgcgac ctggattgcg cttgggattt cgcgtgccat
     1861 gtcgcgcgcc agcagcctcg cgcaggcggt tgccattggc gatctcgggc aggaggtcac
     1921 agtgagcagc aacgacgaga tcaaggacat ggtcgatgcg ctcaatcaaa tgacccgcag
     1981 cttgcgcgcg acggcatcgg ttgcggatgc catcgcgggt ggggacttta ccaatgatgc
     2041 caaacgtctg tccgacaagg acacgctggg aatttcgctg gagaggatga cggccaatct
     2101 gcgatcaacc gcgacagtcg ccaacgcgat agcccagggc gatctgacgt cggaggtcaa
     2161 acgcctgtcc gataaggatt ctctgggcac cgcgcttgag cacatgacag cgaatttgcg
     2221 ggcgaccgcg acgttcgccg atgcgatcgc ggacggcgat ttctcgctgg aagcgaagcg
     2281 tcgttccagc aaggacatgc tcggtattgc cctggagcgc atgaccacca atctgcgggc
     2341 aaccgcgcaa attgccgatg caatcgccga cggtaacctg acgatcatcg ccaaacgtct
     2401 ttccgaccgc gacatgctcg gcaccgcact ggagcgcatg ctggaccggc tgcggaccat
     2461 cgtgaccgac gcttcggcag cggccgacaa tgtgtcgtcg ggcagcgagg agctatcgtc
     2521 gaccgccacg gcgatgtcac aaggcgccac cgagcaggcc tcggccgcgg aagaagcctc
     2581 cgcctcgatg gaggagatgg cgtccaacat caagcaaaac gccgacaacg ccacacagac
     2641 cgaaaagatc gcgcggcagt cggcactcgc cgcgcagaaa agcggtgagg cggtcgatcg
     2701 cgccgtacac gccatgcaaa cgatcgccga gcggatcatc atcgtgcagg agatcgcccg
     2761 gcagaccgat ctgctggcgt tgaatgccgc ggtggaggcc gcgcgcgccg gcgaacacgg
     2821 taaaggcttc gccgtggtgg cctcggaggt tcgcaaactg gcggaacgca gccagaccgc
     2881 ggcgacagag atcggcacag tttcctcgca gacggtgaaa gcggcgcagg aggctggctc
     2941 catgcttggt ctattggttc cggacattaa aaagaccgcg gaactggtgg ccgaaatcag
     3001 tgccgcgtgc cgcgagcagg atatcggcgc cgatcaaatc aatcaggcca ttcaacaact
     3061 cgacaaagtg acgcagcaga atgccagcgc gtcggagcaa atgtcggcga cctcggaaga
     3121 gttggccgcg caggccgaac agttacagtc aagcattgcg tatttccggc tggatgcaaa
     3181 tggcgccgga cccgtcacgc cgtcgccgag atcagcgcaa cgccgtcccg tactacccgc
     3241 actcctggcc cgtccggcga aatccgcagc cgcgcggcca gtgtcgtccg caaatggccg
     3301 cgcgaggcaa ggcggacata ccatcaacct tagcggcagc ggcgccgatc cgcgcgatgc
     3361 cgaattcgag cggatgtaag ccagcgccca ccatacccga gggacccctc acgccatgcg
     3421 tatcactgta aaagccaaac tggcactcgc gttttccctg gtgatcctgt tgtccgcggt
     3481 gagcgcgctg gttggcatca ccaatctcgc aacacttaat acgacaatgg acaacatggt
     3541 ccgagggccg atgcagcgcg tcattgcttc gcaggaatcg tcggaacagt tactgacgat
     3601 cgtccgggcg gagaagaacg tcaacctcgc ggacaccaaa gaccagctca acagcttcga
     3661 gacggaactc agccggttgc gctcagagta cacattacgg cttgatcagg cagtcgccaa
     3721 tgccagtgtg gaaggacggc cgctgtggga ggcagcccgc ggttcatggc agcaatacgc
     3781 gctggtccag gacaagatca tcgaagcggt gaatcacgac gcaaaaccgg aagcgcgggc
     3841 gctttcattg ggctccggcc ggcagcacgt cactgacgcg cgtgcttcgt tgcaaaaggt
     3901 cgtcgatctc aaccgccggc gcctcaacga cgccaccatc gacgcaggac acgagtatga
     3961 gactgcgagg ttgctgctga tcgccgtggt ttgcgtctca ctgctggttg ctacggcgac
     4021 cgggttctgg attgcgcttg ggatcagccg agggctcgcg cgggctggcg cgctggctca
     4081 ggccgtcgcc ggcggcgacc tgacgcagac tgcaagcgtg tcttcgcacg atgaaatcgg
     4141 cgacctcatc ggtcacgtca atgcgatggt cgagcggctg cgcgtcgtcg taagcgatgc
     4201 ctcgggcgcg gcggagaacg tttcttccgg cagcgagcaa atggcatcga cgtcggagca
     4261 actgtctcag ggtgccaccg aacaggcgtc ggctgcagag caggcctccg cctcgatgga
     4321 gcaaatggcg tccaacatca aacagaatgc cgacaacgca acgcagaccg aaaagattgc
     4381 ccgccagtcg gcagtcgacg cgcggaaaag cggcgaggcg gtcgccaacg cggtactggc
     4441 gatgcagacg atcgcggaaa agatcacaat cgtgcaggaa atcgcccgcc agaccgacct
     4501 gctggcgttg aacgccgcgg tcgaggcggc acgcgccggc gagcatggca aaggcttcgc
     4561 cgtggtcgcc tcggaggtgc gcaaactggc cgagcgcagc cagaccgcgg cggcggagat
//
LOCUS       DATAVD010001748         3852 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2398870, whole genome shotgun sequence.
ACCESSION   DATAVD010001748 DATAVD010000000
VERSION     DATAVD010001748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3852
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2398870"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..438
                     /locus_tag="VHX39_33480"
     CDS             <1..438
                     /locus_tag="VHX39_33480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3996110.1"
                     /translation="WLAANRHAHGISGPVVLSGWSAGGHLTAMCLGHPLIQAGLAISG
                     IFELGPLRDTVLNDKLRLTDDEIATMSPLRLPMINKPLAITYGTAELPPLVADSRTLH
                     ARRSAAHLPGALIPVPGGNHFTIVLQLQNQHGVLTRHLPTLLD"
     gene            complement(484..969)
                     /locus_tag="VHX39_33485"
     CDS             complement(484..969)
                     /locus_tag="VHX39_33485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HEX3996111.1"
                     /translation="MQNLLPLAEQLGARLKARGETIAIAESSTGGLISAALLSVSGAS
                     VYFRGGSVIYTAYARSGFLDIPNPLPPPIERASTEPYALLLANTVRERLSATWGLGET
                     GATGPTGNRYGDKAGHTCIALTGPGVSRAITVETGNGDRVANMREFSDRALKLLAEVL
                     G"
     gene            complement(893..1993)
                     /locus_tag="VHX39_33490"
     CDS             complement(893..1993)
                     /locus_tag="VHX39_33490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX3996112.1"
                     /translation="MIGVAIIGLGAALAPHAKALQDMADRVRVVHAVAGNAGRRRSVA
                     ELYGFPVSADAAAAIADPGVDAVMILTPTNAHLEIAEAAFAAGKHVLCEKPLETTLAR
                     AERLVALGRRADRRLAVMLQLRFRAASQRLKTLLEAGKLGEIQAATMTVPWWRPQSYY
                     DEPGRGVMARDGGGVLMIQAIHTLDLFRWCVGISAVEASIVRTTSLHKMETEDYATAL
                     VHLGNGSPGSIVATVAAFPGGPEQIMVIGSQGTARMEGSSLRVSFLHGTEDVVQDGGP
                     SGSGSGFMAFSHEPHKAVISDFLDAIEQGRDPAIPGEEALATQRVIDTIINTTRHRHD
                     YQQRSVNDAKSAAIGRTTRRSSEGAGRNDRYR"
     gene            complement(1990..3003)
                     /locus_tag="VHX39_33495"
     CDS             complement(1990..3003)
                     /locus_tag="VHX39_33495"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEX3996113.1"
                     /translation="MARFAAIGLDHRHVYDMTEGLLDAGAECVGYNSDTTDLRVLAGF
                     RKRFPQVPEASRERLLDDPSVDFIVLSAVPCDRAALAVEAMRRGKDVVSDKPGVTTFE
                     QLEAVRRAVHDTGRLWSICVGRVASPAIQEAVRVVRSGELGRLVQVISLAPHRLNRAL
                     RPSWFFDRPAYGGIINDIGVHSIDQFLALADVAEAEIESATIGAFGTEPRGFEDFAEI
                     TLRTPSVRGYCRVDWFTPDGLADWGDGRLFLIGTEGTLELRKNLDLEGRPGSNHMFVT
                     GRQQTRYQDCSSLPVTYYRDVIEAVRTRDFSALPQEPVFTVCRMALQAQASAQRYFAE
                     RPV"
     gene            3102..3848
                     /locus_tag="VHX39_33500"
     CDS             3102..3848
                     /locus_tag="VHX39_33500"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3996114.1"
                     /translation="MAERVAVITGAGSGIGRASALALCKDGWSVALLGRRKDALEETA
                     GLAAGGKTLPIPTDVADPDQVIAAFAAVKETFGRCDMLFNNAGGNVPSTNFGDFTWEM
                     WRRVVAVNLDAMFMCANQAFRMMRDQTPRGGRIINNGSISAHVPRPGSVAYTSTKHGV
                     TGLTRSISLDGRQYDICAGQIDIGNAATPMTARSTNGQMQPYGQMAVEARMDVSHVGQ
                     QVAFMANLPLESNVQFVTIMATKMPFIGRG"
BASE COUNT          779 a         1268 c         1105 g          700 t
ORIGIN      
        1 tggctcgcag ctaaccgcca cgcgcacggc atcagtgggc ctgtggtgct gtccggttgg
       61 tccgcgggag gacacctgac cgcgatgtgt ctcggccatc ccctaattca ggccgggttg
      121 gcgatttccg gcatatttga actcggcccg ctgcgagaca cggtgctcaa cgataagttg
      181 cgcctgaccg acgatgaaat tgcgaccatg tcgccgttgc gattgccgat gatcaacaag
      241 ccgctggcga ttacctatgg taccgctgaa ttaccgccgc ttgtcgcgga cagccggacg
      301 ctgcatgcac ggcgctcggc agcgcacctg cccggcgcac tcattccggt accgggcgga
      361 aatcacttta ccatcgtcct gcaattacaa aaccaacacg gtgtgctgac ccggcacctg
      421 ccgaccttgc tcgactgaga cattcgcgct ggcgcgaata cctcagtcgc aacgatctgc
      481 ctgtcagccc agtacttcgg cgagaagttt cagcgcacga tccgagaact cccgcatgtt
      541 cgccactcgg tcgccattcc cggtttccac cgtgattgca cgtgacactc ctgggccggt
      601 caaggcgata caggtgtggc ctgccttgtc gccataccgg ttgccggtcg gcccggtcgc
      661 accggtttca ccaagacccc aggtagcgct cagccgctcg cgcaccgtgt ttgccagcag
      721 cagtgcatag ggttccgttg atgcccgttc gatcggcggc ggcaacgggt tcgggatatc
      781 gagaaacccg gaccgcgcat aggccgtata aatgacgctg ccgcctcgga aatacaccga
      841 cgcaccggag accgacagca aggctgccga tatcagccct ccggtggagg attcagcgat
      901 agcgatcgtt tcgccccgcg ccttcagacg agcgccgagt tgttcggcca atggcagcag
      961 attttgcatc gttcacactc ctttgttgat aatcgtgtcg atgacgcgtt gtgttgatga
     1021 tcgtgtcgat gacgcgttgt gttgcaagcg cttcctcccc cggaatggcc ggatcgcgcc
     1081 cctgttcgat cgcatcgaga aaatcgctga tcaccgcttt gtgcggctca tgcgagaacg
     1141 ccatgaaacc ggagccgctg ccggacggtc cgccatcctg aaccacgtct tcggttccat
     1201 gcaggaacga aacgcgcagg ctactgccct ccatcctggc ggtaccttgc gatccaatca
     1261 ccatgatctg ttccggacct cccgggaagg cggcaacggt ggccacgatc gaacccggcg
     1321 agccgttgcc caggtggacc aaggcggtgg cgtaatcctc ggtttccatc ttgtgcagcg
     1381 acgtcgtgcg tacgatcgat gcttcgacag cgctgatacc gacgcaccaa cggaacaaat
     1441 caagtgtgtg gatggcctgg atcatcagca ccccgccgcc gtcgcgcgcc atcacgccgc
     1501 ggccaggttc atcgtaataa gactgcggcc gccaccatgg cactgtcatt gtagcagcct
     1561 ggatctcgcc aagtttgccg gcctcaagca gcgttttcaa ccgctgactg gcagcacgaa
     1621 atcggagttg caacatcacc gcgagccgtc gatcggcgcg ccggccaagc gccaccagac
     1681 gttcagcacg cgcaagagtg gtctccagcg gcttttcgca caacacatgc ttacctgccg
     1741 cgaacgctgc ctcggcgatt tccagatgcg cattggtcgg ggtcaggatc atcactgcat
     1801 cgacacctgg gtcggcgatc gccgctgctg catcggcact aaccggaaaa ccatacaact
     1861 ccgcaacgga tcgccgccgc ccggcgttcc cggcaaccgc atggacgacg cggacccggt
     1921 cggccatatc ctgcaacgcc ttcgcatgcg gagccagcgc agcgccaaga ccaatgatcg
     1981 cgacaccgat cacaccgggc gttccgcgaa atagcgctgc gcgctcgcct gtgcctgcaa
     2041 cgccatgcgg cagacggtga acaccggctc ctgcggcagt gcggaaaaat cccgcgtccg
     2101 cacagcttca ataacgtcac gatagtaggt gaccggaagc gagctacaat cctggtagcg
     2161 agtctgctgc cttcccgtaa cgaacatatg gttcgatccc ggccgcccct cgaggtcgag
     2221 atttttccgc agttcaaggg tgccttcggt gccaatcagg aataaccgcc cgtcgcccca
     2281 gtccgccaat ccatcgggcg tgaaccaatc cacgcggcaa tagccgcgca ccgaaggcgt
     2341 tcgcagcgtg atctcggcga aatcctcgaa ccccctgggt tccgtcccaa aagcaccaat
     2401 cgtggccgat tcgatctcgg cctccgccac atccgcgagt gccagaaact gatcgatcga
     2461 atggacgcca atatcgttga taattccgcc ataagcgggc cggtcaaaaa accaggacgg
     2521 gcgcagcgca cgattgagcc ggtgcggtgc cagactgatc acctggacca atcgtcccag
     2581 ttcacccgaa cgcacgacgc gcaccgcctc ctgaattgcc ggcgatgcca cgcgtccgac
     2641 gcaaatcgac catagccggc cagtgtcgtg caccgcccgg cggactgcct cgagttgctc
     2701 gaacgtcgtc acacccggct tatcggacac gacatccttg ccgcgccgca tcgcttcgac
     2761 cgccaacgcg gcgcggtcgc aagggaccgc cgacagaacg atgaaatcga cggacggatc
     2821 gtcgagcaaa cgttccctcg atgcctcggg aacctgcggg aagcgtttgc ggaatccggc
     2881 caacaccctc aggtcggtgg tatccgaatt gtacccgacg cactccgcgc cagcgtcgag
     2941 caatccttcg gtcatgtcat agacatgccg gtgatccaat ccgatcgcag caaagcgggc
     3001 cattatgtct cccctcggac ggtcaggctc gcaccatctt ccacctctcg caaccaaggt
     3061 ccagaatgag caggatatcc attcaagagg gagaaaacac catggcagaa cgggtcgcgg
     3121 tcatcaccgg agcgggaagc ggcattggcc gggcctccgc cctcgcactt tgcaaggacg
     3181 ggtggtctgt cgcgcttctg ggacggcgca aggatgcgct ggaagaaacc gctggcctcg
     3241 ccgcaggcgg caaaacgttg ccgatcccga ccgacgtggc ggacccggat caggtcatcg
     3301 cggcgtttgc cgcggtcaag gaaaccttcg gccgctgcga catgctgttc aacaacgccg
     3361 gcggcaatgt accgtcgacg aattttggcg attttacctg ggaaatgtgg cggcgagtcg
     3421 tcgccgtcaa tctcgacgcg atgttcatgt gcgcaaatca ggcgtttcgc atgatgcgcg
     3481 atcagacccc gcgcggtggc cgcatcatca acaatggctc gatttcggca catgtgccgc
     3541 gaccgggttc ggtcgcttat acctcgacca aacacggtgt caccggcctt accagatcga
     3601 tctcactcga cggtcgacag tacgacatct gcgcgggaca gatcgacatc ggcaatgccg
     3661 ccacgccgat gacggcacgc tcaaccaacg gacaaatgca gccatacggg cagatggccg
     3721 tcgaggcccg catggacgtc agccacgtcg ggcaacaggt cgcgttcatg gccaatctgc
     3781 cgcttgagtc gaacgtccag tttgtcacga tcatggcgac caagatgccg ttcatcggtc
     3841 gcggctgagc ct
//
LOCUS       DATAVD010001749         2031 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_725404, whole genome shotgun sequence.
ACCESSION   DATAVD010001749 DATAVD010000000
VERSION     DATAVD010001749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_725404"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..353
                     /locus_tag="VHX39_33505"
     CDS             <1..353
                     /locus_tag="VHX39_33505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3996115.1"
                     /translation="RMLDDPSLEIHVLYKDGEPAGFFELDARYGTSVNLSYFGLMPHM
                     IGTGCGPGFLRQAIDAAWQSRPRTVTVNTCTADHPRALPNYLLAGFKPLRSVQEIWDV
                     PTHLGLRIPDHLRM"
     gene            390..1550
                     /gene="hemW"
                     /locus_tag="VHX39_33510"
     CDS             390..1550
                     /gene="hemW"
                     /locus_tag="VHX39_33510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HEX3996116.1"
                     /translation="MIPSVEPLALYIHWPFCLSRCPYCDFNAHVRDVIPQHRFRNALR
                     RELAWEAARVGRRPLRSIFFGGGTPSLMEPETVAVLLEDARASFDCQNDLEITLEANP
                     TSIETSRLAALRDAGVNRISIGIQALEAEPLAMLGRRHSVAQAVAALEIARRLFPRIS
                     FDLIYARPGQSVAAWRSELRRALDLVADHLSLYQLTIEPGTKFEALHRSGAIVLPDAD
                     LAAALYDATADEAARFGLLQYEISNFAKPGGESRHNLQYWRYGDYVGVGPGAHGRITL
                     GDRLVATRRHRAPEPWADRVERTGHGSTEEITLSSDEAVREMLLMGLRLMEGVSSDRF
                     RARTGRTLQSAIDADAFRQAAEAGYMTWHDGRLTATPEGRRRLDALLPYLLI"
     gene            complement(1553..>2031)
                     /locus_tag="VHX39_33515"
     CDS             complement(1553..>2031)
                     /locus_tag="VHX39_33515"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3996117.1"
                     /translation="GINLSSSLLYSFIIATANPFGPLLATSFADKFERKWQLIGAAIG
                     IAVFGVLFSQQTVVPLLILFGVLITLSNNVMSYSFHAYQTELFPTRIRARAVGFTYSF
                     SRISTVFASFIIGFFLQKGGVTGVFGLIAFAMLMVVLSIGLLGPRTRDLQLEQISH"
BASE COUNT          412 a          607 c          611 g          401 t
ORIGIN      
        1 cccgaatgtt ggacgatcca tcgctggaaa ttcacgtgct ttacaaagat ggcgagccgg
       61 ccgggttctt cgagctggac gcgcgctacg gcaccagcgt caacctgagc tatttcgggc
      121 tcatgccgca catgatcggc accggctgcg ggccgggctt cctgcgccag gcgatcgatg
      181 ccgcatggca gagccggcca cgaacggtca ctgtcaacac gtgcactgcc gatcatccgc
      241 gcgcgcttcc gaattatttg ctggcggggt tcaagccgtt acgctcggtg caggagatct
      301 gggacgtgcc tacgcatttg ggcttgcgga tcccagatca tttgcggatg tgacacgcgc
      361 agactatccg ctggcatgag ccggttatcg tgatcccctc cgtcgaaccg ctggcgcttt
      421 acatccactg gccattttgc ctgtcgcggt gtccctattg cgatttcaat gcgcatgtcc
      481 gcgacgtcat tccacaacat cgctttcgaa atgccctgcg ccgggaactg gcctgggaag
      541 cagcgcgggt cggccggcgt ccactacgct cgatcttttt cggtggcggc acgcccagtt
      601 tgatggaacc tgaaacggtg gcggtgttgt tggaggatgc gcgggcgtcg tttgattgcc
      661 agaatgatct ggaaataacg ctggaggcaa atccgaccag tatcgaaaca tcccggttgg
      721 ccgcattgcg ggacgccgga gtcaaccgga tttcaatcgg cattcaggcg ctggaagcag
      781 aaccgctcgc gatgctcggt cgccggcact ccgtggcgca ggcggttgcc gcgctggaaa
      841 tcgcccgtcg gctgttcccg cgcatatcat tcgatctgat ttacgcccgc cccggccaga
      901 gcgtcgccgc gtggcggtcc gagttacgcc gtgccctgga tctggttgcg gatcatctgt
      961 cgctgtatca actgaccatt gagcccggaa cgaagttcga ggcgctacac cgaagcggcg
     1021 ccatcgtttt gccggacgct gaccttgctg ctgcattgta tgatgcgacc gcagacgaag
     1081 cggccagatt cggcctactg caatatgaga tttccaattt cgcgaaaccc ggcggggaaa
     1141 gtcggcataa cctgcaatat tggcgttatg gtgattatgt gggggtcggc ccaggagcgc
     1201 atggccgaat aacgttgggc gatcggctgg ttgcaacccg ccgtcaccgc gcccccgaac
     1261 cctgggcaga ccgcgtggaa cgaaccggtc acggatcgac cgaggaaatt accctgtcct
     1321 ccgacgaagc cgtccgggaa atgctgttga tgggcctgcg tctcatggag ggtgtgtctt
     1381 ccgaccgctt ccgcgcgcgt accgggcgta ctctccagtc cgcgatcgat gccgacgcgt
     1441 tccgacaagc cgccgaggcg ggatatatga cgtggcacga tggccgcctt actgcgaccc
     1501 cggaaggacg acgacggctg gatgcgctgt tgccgtatct gctgatctga cctcaatgcg
     1561 agatttgctc gagttgcaaa tcccgcgtcc gcggcccgag cagaccgatc gacagcacga
     1621 ccatcagcat cgcgaacgcg atcaggccaa acacgcccgt cacgccaccc ttttgcaaaa
     1681 agaaaccgat aatgaaactg gcaaacaccg tgctgatgcg gctgaacgag taagtgaacc
     1741 caactgcccg ggcgcgtatc cgggttggaa acaactcggt ctggtaggcg tggaacgaat
     1801 acgacatcac attattcgac aacgttatca gcacgccgaa caagatcagc agcggaacga
     1861 ctgtctgctg cgagaacagc acaccgaata ccgcgatgcc gatggccgcg ccgatcagtt
     1921 gccatttacg ttcgaacttg tcggcgaaac ttgtggccaa cagcggaccg aacggattgg
     1981 cagtggcaat gatgaaagaa tacagcaggc tcgaactcag gttgatcccc t
//
LOCUS       DATAVD010001750         1821 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3705230, whole genome shotgun sequence.
ACCESSION   DATAVD010001750 DATAVD010000000
VERSION     DATAVD010001750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3705230"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..538)
                     /locus_tag="VHX39_33520"
     CDS             complement(<1..538)
                     /locus_tag="VHX39_33520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HEX3996118.1"
                     /translation="MSGAQHVVSSLMRESLMDRRVIAGTEAPVRRILPKLNVIQIGGQ
                     SIMDKGQSAVIPVLDEILANQADHTQMIGVGPGVRARHILSIGLDLGLPTGALATLAA
                     KSAAQNAYMVSCLLASQGFVYLEAPFIVQLLPAMLAAARGAVFNGVPPYDLWEHPPAV
                     GKIPPHGSDAGSYLVGEVF"
     gene            complement(535..1386)
                     /locus_tag="VHX39_33525"
     CDS             complement(535..1386)
                     /locus_tag="VHX39_33525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014414968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HEX3996119.1"
                     /translation="MANAVQDSMLTDLGKRLVGGSLSDESLMRATDNTPNLALVPWAN
                     VVKIGGQSIMDRGRAGLIPVVNEIVANLPRHKMILGTGAGTRARHIYSVAIDLGLPVG
                     VLTVLGTAVAWQNAQMLQYLLASHGIAFLEPEGFASVPHYLMERGAVICQGMPPYKLW
                     EQNPEIGRIPPQRTDTGCYLIAEVFGARKMIYVKDEDGLYSADPKKDPRAEFIPRISV
                     QELLQRDLNDLVVERAVLEMMLNARHIREIQFVNGLKPGQLTAALDGEPVGTIIYNAD
                     APKGAVS"
     gene            complement(1387..>1821)
                     /locus_tag="VHX39_33530"
     CDS             complement(1387..>1821)
                     /locus_tag="VHX39_33530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996120.1"
                     /translation="RHLLTDAMRVLRPGGVLIAGRVVAPDDGIDARMKAHLATILDGM
                     DVHPYRDKPRDDALSWLVRTMPDRHVLTAATWTAERTPAAFLERHGGGARFRVLDEGV
                     KRDAMRQLAGWAGEQFGSLDAVFTEAFRFELIIHRLQQGTQT"
BASE COUNT          334 a          642 c          516 g          329 t
ORIGIN      
        1 caaacacctc gcccaccaga taggacccgg catcgctgcc gtgcggcggg attttcccca
       61 ctgccggcgg atgctcccac agatcgtatg gtggcacgcc gttgaacacc gccccccgag
      121 ccgccgcgag catcgccggc agcagttgca cgatgaacgg agcctccaga tacacaaacc
      181 cctggctcgc caataaacac gacaccatgt aggcgttctg cgccgccgat ttcgccgcca
      241 gcgtcgccaa cgcccctgtc ggcaacccca gatccagccc gatcgacaag atatgccgcg
      301 cgcgaacgcc cggtccgacc ccgatcatct gagtatggtc cgcctgattg gccaggatct
      361 catccagcac cggaataacc gccgactgtc ccttgtccat gatcgactgg ccgccgatct
      421 ggatcacgtt cagcttcggc agaatccgcc gcaccggcgc ttccgtgccg gcgatcaccc
      481 ttcggtccat cagcgattcg cgcatcaggc tggaaacgac atgctgggcg ccgctcatga
      541 cacggctccc ttcggcgcat ccgcgttgta gatgatggtg ccgaccggct ccccatccag
      601 cgctgccgtc agttgacctg gtttcaggcc gttgacgaac tggatctctc ggatgtggcg
      661 agcgttcaac atcatttcca gcaccgcccg ttccaccaca agatcgttca ggtctcgctg
      721 gagcaattcc tgcacgctga tccgcggaat gaattcggca cgcgggtcct tcttcggatc
      781 ggcgctgtac agcccgtcct catccttcac gtagatcatc ttgcgggcac cgaagacctc
      841 ggcgatcaga tagcagccgg tatccgtccg ctgcggcggg atgcggccga tttcggggtt
      901 ctgctcccac agtttgtaag gcggcatccc ctggcagatc accgccccgc gttccatcag
      961 gtaatgcggg accgaggcaa atccttccgg ctccaagaac gcgatgccat ggctcgccag
     1021 caaatattgc agcatctgtg cgttctgcca ggcgacagcc gtgcccagca ccgtcagcac
     1081 cccgaccggc aacccaagat cgatcgccac cgagtagata tgccgagcgc gcgtgccggc
     1141 gccggtgccc aggatcatct tgtgccgcgg caggttggca acgatctcgt tcaccaccgg
     1201 gatcaatccc gcccgtccac ggtccatgat gctttggccg ccgatcttca cgacatttgc
     1261 ccacggcacc agggccagat tgggcgtgtt gtcggtcgcg cgcatcagcg attcgtcgct
     1321 gagcgacccg ccgaccaggc gtttgcccag gtcggtcagc atcgaatctt ggacggcatt
     1381 ggccattcag gtttgtgtcc cttgctgcaa gcggtggatg atcagttcga agcggaacgc
     1441 ttccgtgaac acggcatcga gcgaaccgaa ttgctcgccc gcccagccgg ccagttggcg
     1501 catggcatcg cgcttaacgc cttcgtccaa tacgcggaac cgggcgcctc cgccgtgccg
     1561 ctccaggaac gcggccggcg tccgttcggc ggtccatgtg gcggccgtca gcacgtgacg
     1621 atcaggcatc gtccgaacca gccacgacaa cgcgtcatcc cgaggtttgt cgcgatacgg
     1681 atggacatcc ataccgtcca ggatcgtcgc cagatgggcc ttcatgcgcg catcgatccc
     1741 atcgtccggc gcaacgaccc gaccggcgat caacacaccg ccgggacgca gcacccgcat
     1801 cgcgtcggtc agcagatgcc g
//
LOCUS       DATAVD010001751         1728 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2772583, whole genome shotgun sequence.
ACCESSION   DATAVD010001751 DATAVD010000000
VERSION     DATAVD010001751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1728
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2772583"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1554
                     /locus_tag="VHX39_33535"
     CDS             <1..1554
                     /locus_tag="VHX39_33535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019646336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEX3996121.1"
                     /translation="LPLAMAFAIASGARPEQGLYTAIIGGASVSLLGGSRVQIAGPTG
                     AFVAILAGITARYGISGLETATLMAGIILVLMGAAKMGSVIRFIPAPVIIGFTAGIAV
                     TIFVGQWRDFLGLPAVQAEHFHERLWRLIEAMPHLNWPTAALGLGSLVLVIYTPRVSV
                     FSRLPGPLVAMLVATVVQAIFHLPGVATLGSAFGGIPRGLPAFSLPDLSPAHVVTLLG
                     PAFTIALLGAIESLLSAVVADGMSGTRHDSNQELIGQGIANIMTPLFGGFAATGAIAR
                     TATNIRNGATGPLAGIVHAATLVAVLLVLTPLAASIPLAALAAILFVVAWNMSDIGRF
                     QSVMRTAPTADRWILLITFLLTVFADLIVAVNVGVILAVLQFIRRMSETVDTQPVGGP
                     TLAAELAALGLGALPPDVQVYEITGPMFFGAIENIKRPLLQIRPYPKTLIIRLNRVPF
                     MDISGIQVLEETIHVLRKKGVAITLCEANPRVRAKLHRAGVVAATNDPTCDRSFADAL
                     AHATLVNVR"
BASE COUNT          272 a          572 c          526 g          358 t
ORIGIN      
        1 ctacccttgg ccatggcgtt cgccatcgca tcaggggcgc gtccggagca aggtctctat
       61 acggccatca tcggtggtgc gtccgtctca cttctcggtg gcagccgcgt tcagatcgca
      121 ggtcccaccg gagcgttcgt cgccattctc gccggaatca ccgcccggta cggcatatcc
      181 gggttggaga ccgcgacgct catggcggga atcatcctgg tgctcatggg agccgcgaag
      241 atgggctcgg ttatccgttt catcccggcg ccggtgatca ttggattcac ggcagggatc
      301 gcggtgacca ttttcgtcgg gcagtggcgc gactttctgg gactgcccgc cgtgcaggcg
      361 gaacactttc atgagcggct gtggcgcctc atcgaagcca tgccgcacct caattggccc
      421 accgcggccc tggggctcgg aagcctcgtg ctggtcatct acacgccgcg agtctccgtc
      481 ttctcccggc tcccggggcc gttggtcgcc atgctggtgg ccaccgtcgt acaggcgatc
      541 tttcacctgc cgggcgtggc gacgttgggc agcgcctttg gcggaattcc gcgcggtctg
      601 ccggctttca gcctgccgga cctgtccccg gcgcatgtcg tgacgttgct cgggccggcg
      661 ttcaccatcg ccctgttggg agcgatcgag tcgctgctgt ccgccgtcgt ggcggacgga
      721 atgtccggca cccgccacga ctcgaaccag gagttgatcg gacagggcat cgccaacatc
      781 atgacaccgc tgttcggcgg attcgccgca accggggcta tcgcccgcac cgcgaccaac
      841 attcgcaacg gcgccaccgg ccccctcgcc ggcatcgttc atgccgcaac cctggtcgcg
      901 gtactcctgg tcctgacgcc gctagccgcc agcattcccc tcgccgcgct ggcagcgatc
      961 ctgtttgtcg tcgcctggaa catgagtgac atcggccgct tccagagtgt gatgcgcaca
     1021 gcgccgacgg ccgaccgttg gatcctgttg atcacatttc ttctgaccgt ctttgccgac
     1081 ctgattgtcg cggtcaacgt cggagtcatt ctcgcggtgc tgcagttcat tcgcagaatg
     1141 tccgagacgg tcgataccca gcccgtgggt ggaccgacgc tcgcggcgga gttggcggcg
     1201 ctgggcctcg gcgccttgcc gcccgatgtg caggtgtacg aaattaccgg accgatgttc
     1261 ttcggcgcca tcgagaacat caagcgcccg ctgctgcaga tccggcctta cccgaagacc
     1321 ctgatcattc gtctcaaccg cgttcctttc atggatatca gtggtatcca ggtgctcgaa
     1381 gagacgatcc atgtgctccg caagaaagga gttgccatca ctctatgcga ggcgaaccca
     1441 cgagtgcgcg cgaagctgca ccgggccgga gtggtcgcag ccaccaacga tccgacatgt
     1501 gatcgctcgt tcgcagatgc gctggctcac gcaacattgg tcaatgtgcg ttaaacgtat
     1561 tacgcttcgc ggctatggtc ataacctcga cggcggcggc actcgccctg atgctcctca
     1621 gtatggcctg ctggggctcc tgggctaata cctacaagct cgcgggcaac gtccgcttcg
     1681 agctgtttta ctgggattac gccatcgggt tggcactcac cgccatcg
//
LOCUS       DATAVD010001752         4678 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_350920, whole genome shotgun sequence.
ACCESSION   DATAVD010001752 DATAVD010000000
VERSION     DATAVD010001752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4678
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_350920"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1186
                     /locus_tag="VHX39_33540"
     CDS             <1..1186
                     /locus_tag="VHX39_33540"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3996122.1"
                     /translation="NFLMVDKIEDPDDTTVIFRLKFATLSFVPALANPWSYIYSARIL
                     AKDQHYYERNIDGSGPFKFESIEVGQSITGVRNPDYYFPGQPYLDGFHAIFAPKQQTR
                     VDAIRADRASNEFRSESPTARDQLVKELGDKITVQESDWNCGNVLTPNHKRKPFDDVR
                     VRRALFLAIDQWNGAKALSKIAIVKTVGGIVFPGSPLAATHDELIALPGFNPDIEASR
                     TEARRLLKEAGADGLSFEMLNRNVDQPYTIVGTWLVDEFRKIGVNVTQKIVPTGPWLE
                     SMRAGDFAVALEANCQDVVNPIADTGRYLPHELYSENFAYHDDPTQVEIYNRMVRETD
                     PVKVRVLMREYEKQVLDVGAHQLPVTWWYRILPMRSYVKGWKISSSHYLNQNLANIWL
                     DK"
     gene            1187..2158
                     /locus_tag="VHX39_33545"
     CDS             1187..2158
                     /locus_tag="VHX39_33545"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3996123.1"
                     /translation="MYQYILKRVLLTIPTLIGAAALVFLLMRLIPGDICLVRLGGGGS
                     SFDPRALANCHAEIGIDRPMIVQFLDFMWGAARLDFGTSMWSGKPVITEIAARLPVSL
                     EIAVLATIVAVSIAVPLGTISALKQNSWLDVAVRVFAIGGIATPSFWIGIVSILLVLD
                     ISNAITGSPWMPPIDYVPFWKNPIANLSMVALPAITVGYRYAAVSMRMTRSAMLEVMK
                     EDYIRTARAKGLVNKLIINRHALKNALLPIVTLIGIEFAFLIGGLVVTEQVFNLNGVG
                     RLFVQAVQNQDYTLTQALVMLTVAVFVFTNLAVDLLYAWLDPRIRFN"
     gene            2170..3057
                     /locus_tag="VHX39_33550"
     CDS             2170..3057
                     /locus_tag="VHX39_33550"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3996124.1"
                     /translation="MSVTVFDPDAIDLRPSLWSRALRFCRRQPLGTFGLVLVLIIAVT
                     GLFAEALAPYNPTANDFAAMTEAPSVNHWLGTDQFGRDLLSRIIYGARTALIVGLSSA
                     FVGGSLGLVLGVGSAYFGGLIDMLMQRLFDIVMAFPLIIMALAIVSIFGTGVQNVIIA
                     ITIPLIPRCARVVRSAALVIREVPYVDAARACGFSAWRIILRHMVPNVMAPFLIMVTA
                     FVGQAILAEASLSYLGLGVQEPVPAWGLMLQGGAEEYASTAPWIAVFPGVAIMLAVLG
                     INLFGDALRDTLDPKLRDR"
     gene            3091..4179
                     /gene="glnS"
                     /locus_tag="VHX39_33555"
     CDS             3091..4179
                     /gene="glnS"
                     /locus_tag="VHX39_33555"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR00440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004819 - glutamine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006425 - glutaminyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HEX3996125.1"
                     /translation="MSETQDTNRDFVRDIVQSDLAAGRVHEVVTRFPPEPNGYLHIGH
                     AKSICLNFGVAAELNGHCNLRFDDTNPVKEEQEFIDSIQHDVHWLGFDWGKHLYFASD
                     YFEQLYEWAEHLIRAGKAYVDDTPPAAMRSQRGTLTEPGQNSPDRYRSIEENLDLFRR
                     MRAGEFHNGARVLRAKIDMASGNMNLRDPVLYRILHARHPRTSDKWCIYPTYDFAHGQ
                     SDAIEHVTHSICTLEFEDHRPLYDWLIESLPVPSQPRQYEFARLNISYTVLSKRILTR
                     LVSEKHVSGWDDPRMPTLAGLRRRGVPASAIREFVRRIGVARAYSTVDVAQLDSAIRD
                     VLNPAAPRRMAVLRPLKLIIENYPEGQT"
     gene            4231..>4678
                     /locus_tag="VHX39_33560"
     CDS             4231..>4678
                     /locus_tag="VHX39_33560"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: protein motif:HMM:NF015883.4"
                     /note="catalyzes a two-step reaction, first charging a
                     glutamine molecule by linking its carboxyl group to the
                     alpha-phosphate of ATP, followed by transfer of the
                     aminoacyl-adenylate to its tRNA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HEX3996126.1"
                     /translation="MTFGREIYIEQDDFMEDPPKKFFRLAPGREVRLRYGFFVTCDEI
                     VRGPSGDVVALRCTYDPASKGGNSPDGRKVQATLHWVAAADAVIAEVRLYEQLFNRPD
                     PGADGDVMADLNPSSMEVLSNCLVEPALENAPEGEAVQFERLGYFCR"
BASE COUNT          884 a         1438 c         1376 g          980 t
ORIGIN      
        1 caacttcctc atggtcgaca aaatcgagga cccggacgac accaccgtca tttttcggct
       61 gaaattcgcc acgctctcat tcgttcccgc gttggccaat ccttggagct acatctactc
      121 cgcgcggatc ctggcgaagg atcagcacta ctacgaacgc aacatcgacg gctccggtcc
      181 gttcaaattc gagagcatcg aggtcggcca gtcgatcacc ggagtgagga atccagacta
      241 ttatttcccg ggccagccgt acctcgatgg ctttcatgcc atctttgcgc cgaagcaaca
      301 gaccagagtc gacgccattc gggccgatcg cgcctccaac gagttccgct ccgagtcgcc
      361 gaccgcccgc gatcaactgg tcaaggaact cggcgataag atcacggttc aggaaagcga
      421 ctggaattgc ggcaacgttc tgacaccgaa ccataagcgc aagccgttcg acgacgttcg
      481 cgtgcgcagg gcgctgttcc tggccatcga tcaatggaac ggagccaaag cgctcagtaa
      541 aattgccatc gtgaagaccg ttggcggcat cgtttttccc gggtcgcctc tggcggccac
      601 gcatgacgaa ttgatcgcac tgccgggctt taaccccgac atcgaagcct ctcgcaccga
      661 agcccgccga ttgctgaagg aagccggcgc cgacgggttg tcattcgaaa tgctgaaccg
      721 caatgtcgat cagccgtata ccatcgtcgg cacctggctg gtcgatgaat tccgcaagat
      781 tggcgtcaat gtcacccaga agatcgtgcc caccggcccg tggcttgaaa gcatgcgagc
      841 tggcgacttt gcagtcgcgc tggaggccaa ttgtcaggac gtggtcaacc cgatcgccga
      901 caccggacgt tacctgccgc acgaactcta cagcgagaat tttgcctatc acgacgatcc
      961 gacacaggtg gaaatctaca accgaatggt tcgtgagacc gaccccgtca aggtccgcgt
     1021 gttgatgcgc gagtacgaga agcaggtgct tgacgtcggg gcgcatcagt tgccggtgac
     1081 ctggtggtat cgcattttgc cgatgcgctc ttatgtcaaa ggctggaaga tcagcagcag
     1141 ccactacctc aaccaaaacc tggcgaatat ctggctcgat aaatagatgt atcaatacat
     1201 cctcaagcgc gtgttgctga cgatcccgac gctgatcggg gcagccgcgc tggtgttcct
     1261 gctgatgcgg ctgatccccg gcgacatctg cctcgtgcga ctgggcggtg gcgggtcatc
     1321 cttcgatccc agggcgctcg ccaactgcca tgccgagatc gggatcgacc ggcccatgat
     1381 cgtgcagttc ctggatttta tgtggggcgc agctcgattg gacttcggca cctcgatgtg
     1441 gtccggcaag ccggtgatca cggaaatcgc ggcgcggttg cctgtctcgc ttgagatcgc
     1501 ggtgctcgcc accattgtgg cagtgtcgat cgcagtcccg ctcggcacga tctcggcgct
     1561 caagcaaaac agttggctcg atgtcgcagt gcgggtgttc gccatcggcg gcatcgccac
     1621 gccgtcgttc tggatcggca tcgtgtcgat cctgctggtg ctggacatca gcaacgcaat
     1681 caccggttca ccgtggatgc cgccgatcga ttacgtgcca ttctggaaga acccgatcgc
     1741 caatctgtca atggtggcgc tgccggcgat tactgtcggt taccgctatg ccgccgtcag
     1801 catgcgcatg actcgctcgg cgatgctgga ggtgatgaag gaagattaca tccgcaccgc
     1861 gcgcgccaaa ggcctggtca acaagctgat catcaatcgc catgcgttga agaacgcgct
     1921 gctgccgatt gtcaccctga ttggcatcga gtttgccttc ctgatcggcg gccttgtggt
     1981 gaccgagcaa gtgttcaatc tcaacggggt cggccggctg tttgtgcagg cggtgcaaaa
     2041 ccaggactat acgctcacac aggcgctggt catgctgacg gtggcagtgt ttgtgttcac
     2101 caatctcgcg gtcgacttgc tgtatgcctg gctcgacccg cgcattcgct tcaactgatc
     2161 ggggcgccca tgtccgttac cgttttcgat cccgatgcaa ttgaccttcg accctcgctc
     2221 tggtcgcgcg ccctgcgctt ttgccgccgc caacccctgg gcacgtttgg cctggtgctg
     2281 gtgctgatta ttgccgtcac cggcctcttc gccgaagccc ttgcgcccta caacccgacc
     2341 gccaacgact ttgccgcgat gaccgaggcg ccctcggtca accactggct cggcaccgat
     2401 cagttcggcc gcgacctgtt gtcacgcatc atttacggcg cccgtaccgc actcatcgtc
     2461 ggcctgtcct ccgccttcgt cggcggttcc ctgggcctgg tcctgggtgt cggcagcgcc
     2521 tatttcggcg ggttgatcga tatgctgatg cagcgcttgt tcgacatcgt gatggcgttc
     2581 ccgctgatca tcatggcgct ggccatcgtg tcgatcttcg gcaccggcgt gcagaacgtc
     2641 atcatcgcca tcaccatccc actgatcccg cgctgtgccc gagtggtgcg ttcggccgcg
     2701 ctggtcattc gcgaagtgcc ctatgtcgac gcggcccgcg cctgcggctt cagtgcatgg
     2761 cggatcatcc tgcgacacat ggttcccaac gtcatggcgc cattcctgat catggtcaca
     2821 gcgttcgtcg gccaggcgat cctggccgag gcctcgctgt cctatctggg cctcggcgtg
     2881 caggagcctg tgccggcgtg gggtttaatg ctgcaaggtg gcgccgagga atacgcctcc
     2941 acagcacctt ggattgcggt tttccccggc gtggcgatca tgctggcagt gctcggcatc
     3001 aacctgtttg gcgacgcttt gcgcgatacc ctggacccga agctccgcga caggtagaca
     3061 gcgcggcaca ccgaccccag gttgtgtcgc atgtcagaaa cccaggatac caaccgcgat
     3121 tttgtccggg acattgtgca gtccgatctg gccgccggac gcgtccatga agtcgtcacc
     3181 cggtttccgc cggagccgaa cggctatctg cacattggcc atgccaagtc gatctgcctg
     3241 aatttcggcg tcgcggccga attaaacgga cactgcaacc tgcgtttcga cgacaccaat
     3301 ccggtgaagg aggagcagga attcatcgac tcaatccaac acgacgtgca ctggctgggg
     3361 ttcgactggg gtaaacatct gtacttcgcc tcggattatt tcgaacagct ttacgagtgg
     3421 gccgagcatc tgatccgagc cggcaaagcc tatgtcgacg atacgccacc cgctgctatg
     3481 cgttcacagc gaggcacact gaccgagccg ggccagaaca gcccagatcg ctatcggtcc
     3541 atcgaggaga atctcgattt attccggcgc atgcgggcgg gagaatttca caacggtgct
     3601 cgcgtgttgc gcgcaaagat cgacatggcg tcgggcaaca tgaacctgcg cgatccggtg
     3661 ctttatcgga ttctgcatgc gcgtcacccg cgcaccagcg acaaatggtg catctatccc
     3721 acctacgatt tcgcccatgg tcagtcggat gcgatcgagc acgtcactca ctcgatctgc
     3781 acgctggaat ttgaagatca tcgcccgctg tacgactggc tgatcgaaag cctgccggtg
     3841 ccgtcgcagc ccagacagta cgagttcgcc aggctgaaca ttagttacac ggtgctgtcg
     3901 aagcggatcc tgacccggct ggtttcggaa aagcatgtca gcggctggga tgatccgcga
     3961 atgccaacgc tcgctgggct tcggcggcgt ggcgtgccgg cctcggcgat ccgggaattc
     4021 gtgcgccgga tcggcgtggc acgggcctac agcaccgtcg atgttgcgca gttggactcg
     4081 gcgatccggg acgtgctcaa tccggctgcg ccgcggcgaa tggcggtatt gcggccgctg
     4141 aagctgatca tcgagaacta ccccgagggt cagacctaaa cgttacaggc aatcaaccat
     4201 cccgatgatc catctgccgg cacacggccg attacgttcg gccgcgagat ttatatcgag
     4261 caagatgact tcatggagga tccacccaag aagttctttc gcctcgcacc gggtcgcgag
     4321 gtgcggctgc gttatgggtt cttcgttacc tgcgacgaaa ttgtgcgtgg accatcgggt
     4381 gatgtggtgg cacttcgttg cacctatgat ccagcaagca aaggcggcaa ctcgcctgac
     4441 ggccgcaaag tacaagccac tttgcactgg gttgcggcag ccgatgcagt catcgcggaa
     4501 gtgcggcttt acgaacagtt gttcaatcgc cccgacccgg gcgcggacgg cgacgtgatg
     4561 gcggacctca atccgtcgtc gatggaggtt ttgtcaaact gcctggtcga gcccgctctg
     4621 gaaaacgctc cggagggtga ggctgtgcag ttcgagcgcc tcggctattt ctgccgcg
//
LOCUS       DATAVD010001753         3511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3140616, whole genome shotgun sequence.
ACCESSION   DATAVD010001753 DATAVD010000000
VERSION     DATAVD010001753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3511
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3140616"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1243)
                     /locus_tag="VHX39_33565"
     CDS             complement(<1..1243)
                     /locus_tag="VHX39_33565"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3996127.1"
                     /translation="MSDLSRFIPLSARVVLDIGCGDGSLGLAYRRLNPNARLLGIDID
                     PAMVAVAHEHYDECVVADAQADALPFATPDGIDCMIYSAIQEHLADPFAMLARHAAAL
                     SPDGMMLICVPNVEHWSLTERLLRGTFRYDDDGLLDRRHLRWFGLDTFGRGLSEAGLV
                     PVDVQPRIFDERSGRAFIEAMTPALRNLGIDPNEYARTALPLQYIWRARQTPIRRLVV
                     AGDMLRPVGGVSHLRVIHPLAAMASDPAVATKFAPASHPPEAQDDSGADEEAQKIFIM
                     HRPALFGADGQALINNMIDKGWLVVTEFDDHPDFMRGLNTPDLVSFRGVHAVQTTTPE
                     LANVLRQRNPEVALFPNAVAVLPEVRNFTDPGVLTVFFGALNREPDWRTLIGPINAVA
                     ARAGDRLRFRVVHDEGFFQALE"
     gene            complement(1292..2269)
                     /locus_tag="VHX39_33570"
     CDS             complement(1292..2269)
                     /locus_tag="VHX39_33570"
                     /inference="COORDINATES: protein motif:HMM:NF016145.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide pyruvyl transferase family
                     protein"
                     /protein_id="HEX3996128.1"
                     /translation="MILYQWRGAHRNFGDELNSLLWPRLLPDFFDQDEATRFLGIGSI
                     LDNRHDATPLKLVAGSGYGGYQPQIVLDESWIIHWVRGERTARLLGLPTGLGIGDPAS
                     LLPLTGLTPEHEDRDIGFIPHFESAARGAWQEVAAKAGVTLIDPREDPLTVIAAIGKC
                     RVVMSEALHGVIVADALRVPWIAIRPLAPIHRPKWFDWAETLDLKIEFAGLLPSTALE
                     RAHLTHLSRFHLGRRVLHHQAARLHDIARQRHIDRAALALRAVTRAEPQLSRSTLLQD
                     AQARMMEKIAALRRQPMGGCRANASAAPSASLHGNGVCAYQDVPGRQTA"
     gene            complement(2266..>3511)
                     /locus_tag="VHX39_33575"
     CDS             complement(2266..>3511)
                     /locus_tag="VHX39_33575"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3996129.1"
                     /translation="CTHDRPRYLRDCLDGLRHQTIAQDRFAVLIIDSASPEPARSELR
                     ELLRQYPFARLIRVEEPGVSAARNAGARAASTDYIAYIDDDAIPSETWVEAIIDAINE
                     RGRDRPAVLGGRILPKWEALLPAWWPPSLRGLLSIIEHEGTGEYRSNEVPPALEPYGC
                     NMIVHVRSLLDAGGFGSSIGRIAGVLLSDEDIQLAWRLQDEGFSVRYDSNIVVFHQIQ
                     ARRLKPDWLLSRLYWQGASTVLSRRMLHDGGAVWRELPRRLLVAILFSPGALLPRTST
                     DWLSMRWRHAYSAGFVRAALGWRATDAARRMARKPQPAPAIPFARLPPPIPPPEAIRM
                     PPRLPIRGRIREPVYASMRDSLRLFQPIQVRTVARPSDAVTAREPVPAPSPPPVREVP
                     VREATREPDRKPVLEPTAPGVA"
BASE COUNT          673 a         1083 c         1177 g          578 t
ORIGIN      
        1 tttccagtgc ctggaaaaat ccttcgtcat ggaccacccg gaagcgcagc cggtcaccgg
       61 cccgggccgc aaccgcattg atcgggccga tcagggtgcg ccagtccggc tcgcgattca
      121 gcgcgccgaa aaacacggtg aggacacctg ggtcggtgaa attgcggacc tcgggcagca
      181 cggcgacggc attgggaaac agcgccactt ccgggttccg ttgccgcagc acattcgcca
      241 gttccggcgt ggtggtctgc accgcatgca cgccacggaa cgaaaccagg tccggcgtgt
      301 tcaggccccg catgaagtcg ggatgatcgt cgaactcagt aaccaccagc cagcctttgt
      361 cgatcatgtt gttgatcagg gcctggccat cggcaccgaa caacgcaggc cgatgcatga
      421 tgaagatctt ctgggcttcc tcgtcggcgc cgctgtcgtc ctgcgcttcg ggagggtgcg
      481 atgccggcgc gaattttgtg gcaaccgccg ggtcggaagc cattgcggcc aacggatgaa
      541 tgacccgcaa atgcgacacg ccgccgaccg gacgcagcat atcgcccgcg accacgagcc
      601 gccgtatcgg cgtctgccgg gctcgccaga tatattgcaa aggcagcgca gtgcgcgcgt
      661 actcgttcgg gtcgatgccg agattgcgaa gcgccggggt catcgcctca atgaatgcac
      721 ggccggaacg ctcgtcgaag atccgcggct gtacgtcaac gggaacgagg ccggcttcgc
      781 tcaggccgcg gccaaatgtg tcgaggccga accatcgcaa atggcggcga tccagcaggc
      841 cgtcgtcgtc gtagcggaac gtgccgcgca acaggcgctc ggtcaggctc caatgttcca
      901 catttggaac gcagatcagc atcatgccgt cgggcgacaa tgcagcggcg tggcgggcga
      961 gcatggcgaa agggtctgcc agatgctcct gaatcgcact gtatatcatg cagtcgatac
     1021 cgtccggtgt ggcgaacggc aaggcatcgg cctgagcgtc ggccaccacg cattcgtcgt
     1081 agtgttcgtg cgccactgcc accatcgccg gatcgatgtc gatgcccagc aggcgtgcgt
     1141 tggggttcag tcgccggtaa gccaggccaa gcgatccgtc gccgcaacca atatccagga
     1201 ccacacgagc gctgagcgga ataaagcgcg acaggtcgga catgggcggc atcaggttcg
     1261 gtattctccc cggcgtgagg gcgccgcggg atcaggcggt ctgccggccg ggcacatcct
     1321 ggtacgcgca aacgccgttg ccatgcaagg acgccgaagg ggcagcactt gcgttggccc
     1381 ggcatccgcc catcggttgc cggcggagtg cggcgatctt ctccatcatc cgagcctgag
     1441 catcctgcag cagcgtgctt cgggacaatt gcggctctgc cctggtgacg gcccgtaacg
     1501 ccagagcggc ccggtcgatg tggcgttgtc tcgcgatatc atgcagccgt gccgcctgat
     1561 gatgcaaaac ccgccggccc agatggaaac gcgacaaatg ggtcagatgc gcccgctcga
     1621 gtgcagtgga gggaagcaag ccggcgaatt cgatcttcag gtcgagggtt tccgcccagt
     1681 cgaaccattt cgggcggtga attggggcga gcgggcggat cgcgatccac ggtacgcgta
     1741 gcgcgtcggc cactatgaca ccgtgcaggg cctcgctcat gaccacgcgg catttgccga
     1801 tggcggcgat caccgtcaac ggatcctcgc gcggatcgat caaggtcaca ccggctttcg
     1861 ccgcgacttc ctgccaggcg ccgcgggcag cgctttcaaa atgcgggatg aacccgatgt
     1921 cccggtcttc atgctccggc gtcagcccgg tgagcggtag caaagaagcc ggatcaccga
     1981 tgccaagccc agtcggcaat cccagcaatc gagcggtgcg ttcgccgcgc acccagtgaa
     2041 tgatccagct ttcgtcgaga acgatctgcg gctgataacc gccatagccg gagcccgcaa
     2101 ccagtttcaa cggcgtggca tcgtggcgat tgtccaggat ggacccgatc ccgaggaagc
     2161 gggtggcttc gtcctgatcg aagaagtccg gcagcaatct gggccaaagc aagctgttca
     2221 gctcgtcgcc gaaattccgg tgggcgccgc gccactggta aaggatcacg cgacgcccgg
     2281 cgcggtgggc tccagaacgg gttttcgatc gggctcgcgg gtcgcttcgc gaacggggac
     2341 ttcgcgaacg ggcgggggtg agggcgcggg gacaggctcg cgagcggtca cggcatcgga
     2401 tgggcgggca actgtgcgaa cctggatggg ttgaaacagc cgaagggaat cgcgcatcga
     2461 ggcgtagacg ggttcacgga tgcggccgcg gatgggcaac cgtggcggca tacggatcgc
     2521 ctccggtggc ggaatcggcg gtggcaaacg agcgaagggg atcgctggcg ccggctgagg
     2581 tttgcgggcc atccggcggg ccgcgtcggt cgcgcgccag ccgagtgcgg cgcgtacgaa
     2641 tcccgccgag taggcgtggc gccaacgcat tgaaagccaa tccgtggagg ttctcggtaa
     2701 tagcgcacca ggcgaaaaca ggatcgcgac caacaggcga cgcggtaatt cacgccagac
     2761 ggcaccgccg tcatgcaaca tccgccggct cagcacagtc gaggcgcctt gccaataaag
     2821 acgcgacaag agccagtccg gcttgagccg ccgggcctgg atctgatgga acaccacgat
     2881 gtttgaatcg taacggaccg aaaagccttc gtcttgcaga cgccaggcga gctggatgtc
     2941 ctcgtccgac aacaggacgc cggcgatgcg gccgatgctg ctgccgaagc cgccggcatc
     3001 caatagtgac cgcacatgca cgatcatatt gcagccgtaa ggctccagcg cggggggcac
     3061 ctcattgctg cggtattcgc cggtgccttc gtgttcgatg atcgatagca ggcctcgcag
     3121 ggacggtggc caccatgcgg gcaacagcgc ttcccacttg ggcaggatgc gaccgccgag
     3181 cactgccggg cgatcccgcc cgcgctcgtt gatcgcgtcg atgatcgcct cgacccaggt
     3241 ttccgagggt atggcgtcat cgtcgatata agcgatgtag tccgtgcttg cggcgcgggc
     3301 gccggcgttg cgggcggcac tgacacccgg ctcctcaact cggatcagac gtgcaaaggg
     3361 atattgccgg agcagttcac gcagttccga tcgggcaggt tccggcgacg cgctgtcgat
     3421 gatgaggacg gcgaaacgat cctgggcaat ggtctgatga cgcagcccgt cgaggcaatc
     3481 gcgcagatag cgcggccgat catgcgtaca t
//
LOCUS       DATAVD010001754         2110 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1655391, whole genome shotgun sequence.
ACCESSION   DATAVD010001754 DATAVD010000000
VERSION     DATAVD010001754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1655391"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1231
                     /locus_tag="VHX39_33580"
     CDS             <1..1231
                     /locus_tag="VHX39_33580"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003624393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEX3996130.1"
                     /translation="QAIGTIMTEEDFSEAVPGGLQYRGDYLVPVGQALAQKHGTALAT
                     PDKTIEAPEVWIDTVRDFTIDAMMADIREDLALLGIRQDVFTSERTLVASGAADKIIN
                     QLHADGLIYEGVLDPPKGKTPDYWEPRPQTLFRSTGFGDDVDRPLRKSDGSNTYFAND
                     IGYHANKVARGYDILIDVLGADHGGYVPRMKAAVRAISRDQTKFEAVLCQIVHILRGG
                     EPVKMSKRAGSYVALRDLLEEVGRDAVRFTMLMRKADAQMEFDLEQAVAQTRENPVFY
                     VQYAHARCRSVLRGAAETLPDAGLTPDTLADADLSSLTDEAETALIRRLATWPRTVEA
                     AALAREPHRIAFFLYDLAGDFHMLWNRGRDDSTLRFLQSGRPVETRARLALVAATAVA
                     IRSGLRVMGVEPVEEMR"
     gene            1280..1909
                     /locus_tag="VHX39_33585"
     CDS             1280..1909
                     /locus_tag="VHX39_33585"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEX3996131.1"
                     /translation="MPEQVHFSGPMYRPSHADYHGVDTGTKRLLYVMGAGGLALLLGF
                     GAYRVIGHSGGGVVPTIQAEQGPMRVKPENPGGMTVTEQTKQADPNDSHLAPATEEPN
                     PGALLAVGGPANAPKPPAAALAPPRPKPVTVLLSSTKSEAEAQLDWDKMTKKLPDLFR
                     DHRALFQKTDEHGPTPWRLRTGGFADAAQAKSFCDKVKAKGGQCTVADF"
BASE COUNT          426 a          662 c          662 g          360 t
ORIGIN      
        1 gcaggcaatc ggcaccatca tgacggaaga ggatttttcc gaagcagtcc ccggtggcct
       61 gcaatatcgc ggcgattatc tcgtgccggt cggccaggcg ttggcgcaaa agcatggcac
      121 ggcgctcgca acaccggaca agaccatcga ggcacccgag gtctggatcg acacggtgcg
      181 cgacttcacc atcgacgcca tgatggcgga tatccgcgag gatctggcgc tgctcggcat
      241 ccgccaggac gtttttacct cggaacggac gctggttgca tcgggtgcag cggataaaat
      301 catcaatcaa ttgcacgccg acggattgat ttatgaaggc gtgctcgatc cgcccaaagg
      361 caagacacca gactactggg aaccgcggcc gcaaacttta ttccgcagca ccggttttgg
      421 cgacgacgtt gatcggccgc tacgcaaatc cgatggcagc aacacgtatt tcgccaacga
      481 catcgggtat cacgcgaaca aggtggcacg cggctacgat attttaatcg atgtactggg
      541 cgccgaccac ggcggttatg tgccgcgcat gaaagcggcg gtgcgcgcga tctcccgcga
      601 tcaaacaaaa ttcgaagcgg tactctgcca aattgtgcac atcctgcgtg gcggcgaacc
      661 tgtaaagatg tcgaaacgcg ccggcagcta cgtcgcattg cgcgatttgc tggaggaagt
      721 cggccgggat gccgtccgct ttaccatgct gatgcgcaag gcggacgcgc aaatggaatt
      781 cgacctcgag caggcagtgg cgcaaacccg ggaaaacccg gtcttctacg tgcaatacgc
      841 gcacgctcgt tgccgttcgg tgctgcgtgg cgcggcggag acgctgccgg atgccgggct
      901 tacgccggac acgttggccg atgccgacct cagcagcctg accgatgagg ctgagacagc
      961 gctgatccgt cgcctcgcca cctggccgcg caccgtcgaa gcggcggcgc tggcccgcga
     1021 gccacacaga attgcgtttt ttctctatga cctggcgggc gactttcata tgctgtggaa
     1081 ccggggcagg gacgactcca cgctccgatt cctccagtcc ggccggcccg tggagacccg
     1141 agcccggctg gcactcgtgg cggcaacggc tgtggcgatc cgctccggcc tacgcgttat
     1201 gggcgtcgaa cccgtcgagg aaatgcgttg accctcttgc ggtgaccagt cgccggaaga
     1261 ccatcacgaa aggagcatca tgccggagca ggttcatttc agcggtccga tgtatcgtcc
     1321 gtcgcacgcc gactatcacg gtgtcgatac cggaacaaaa cgcctccttt acgtgatggg
     1381 tgcgggcggt cttgcccttc tgttgggctt tggggcgtac cgggtaatcg gccactcggg
     1441 tggcggcgtg gtgccgacca tccaggccga gcaaggcccg atgcgtgtca aacccgagaa
     1501 ccccggcggc atgacggtca ccgaacagac caaacaggcc gatcccaacg acagccacct
     1561 tgcgcctgcc acggaagaac cgaacccggg tgccttgctc gcggttggcg gcccggcgaa
     1621 cgcgcccaaa cctccggccg ccgcactcgc gccgccgcgg ccaaagccgg tcacggtgtt
     1681 gctgtcgtca acgaagtcag aggccgaagc gcagcttgac tgggacaaga tgacgaaaaa
     1741 gctgccggat ttgttccggg accaccgggc gttgttccag aagaccgatg aacatggacc
     1801 gacgccgtgg cgcttgcgca ccggcggttt cgctgatgca gcacaggcga agtcgttctg
     1861 cgacaaggta aaggcgaagg gcggtcagtg tacggtggct gatttctgac ccctgactgc
     1921 agcagacaca ccacgatccg atagtcggcg cggccgctgg gattattccg cagccgcgcc
     1981 gacgcgaacc tcatctgatc ctcgccgcat cgcggtgacc gcgagtgcgg ctgccaggca
     2041 agccacaccc gccgcgccaa atgccggcag atagctggcc agtgcatcac gagacaggcc
     2101 tgcgccatac
//
LOCUS       DATAVD010001755         3945 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3140821, whole genome shotgun sequence.
ACCESSION   DATAVD010001755 DATAVD010000000
VERSION     DATAVD010001755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3945)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3945)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3945
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3140821"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..291
                     /locus_tag="VHX39_33590"
     CDS             <1..291
                     /locus_tag="VHX39_33590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996132.1"
                     /translation="RRALLYDVSDADATAGHITVGVASVSGWRLAGVVGMPGKAQEWA
                     TDLQGKVPEHIVPDGPLTPDGSISVRMIANPTTAANPAVKTGAKPALTGAAR"
     gene            288..2105
                     /locus_tag="VHX39_33595"
     CDS             288..2105
                     /locus_tag="VHX39_33595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996133.1"
                     /translation="MSTIPTPAPPIGSMYLFDCVTPPLVDGSYRIDVVTNVTYDGNPA
                     PLSSNSGYFDIEGPRFTLPATDVAAVYPPNNGHGGFDEYIPQVVLARRTLPWERRLTS
                     NPSAIGTPARDQWTPQPDPFPQVQNEPQEYGPAPWLALLVFQEGEYTLHQNVALRSVV
                     PADVYARLEVADGITCDSIEVEYSLLESVLPSLDELTLLAHVRQVNVNDKELNAASGD
                     GLYAVLMSNRIPAPNAKFRACLVSLEERTDLVKADPPPVAMPIFIGVLENPVIGQLDS
                     ARPTEQQPALPAFEATARMSSGTPQQTLINPIGSKVLATVADRNVAPSLNLTRVPPYH
                     VFIGTKQLVLLYSWQFECTGVGTFRDYVQRINVSTMGTVEEPGHPPVIDTGHIPMTVM
                     DRAGVEEDVWYRGPFVPMPLTRDALTYHSADQCRRVTPETGAEDISYAAAFECGRLMA
                     AADPRLAQELMRWRREPYRQSVRTDSLLAIQAAIPLDQTLDIHKPVVPVVAANAAGSI
                     VAGVELVGDKYGIGLVSHAPGLDPGQLQQAWNLSSVAEATAILGGESGATGAVVTAPA
                     QTVRTATTLDQVAADTTSLNRLQSARDQALNTVQLQMGK"
     gene            2109..3167
                     /locus_tag="VHX39_33600"
     CDS             2109..3167
                     /locus_tag="VHX39_33600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996134.1"
                     /translation="MRTAWIQSSTALKERLLRPIQLDTTEAESEMPPYMELFLSHLRL
                     LVGVPFDYLVPDDRLLPDESIRFFYIDRSWTDRLVDGAIAVGKIGTREQAHHQGHAPA
                     VNQQVDLSERIVRTIQRGLQSFTDAKTGNDGKAAPADTITGFLLRSSAVSGWPHMDVR
                     AYKTDVAEPFDPADAKAQSQQLITLRLELLSPGLMIALFQGVPQLVILEEPHNGVMFG
                     VHVDNGVDKVYLRDNTGHQIPIPPIPSPPASPNYYDAAIPFRSTNSRVVHVTELRRRL
                     NQAIAQHPTQVNITGSASFAIAVLDPPWRQRFEGTVDKAGTQDTSGGFVANLQIAQRV
                     AENSTFDEVRNLVTTYGH"
     gene            3157..>3945
                     /locus_tag="VHX39_33605"
     CDS             3157..>3945
                     /locus_tag="VHX39_33605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996135.1"
                     /translation="MAISTRLSFTDQAAAFSVAAAYRITPKVIGTWNPYLIRTPRVLV
                     PMQVDALVVRPNEPAQSWADCALKPDPQQTTRVTRYDILPTPFAELKQTRTAGVYLHW
                     ALPDALTHGYADATGNTTTFPAAPDRWLILRTYPSATTLRAAAGTVGLRGVKGWVLRA
                     GDQNPVPIDLDSFSEGAPSQDAVNNPLTVLGTGDVAWAAYYDNCVNRLAFYDSLSDIS
                     EGPVSYLVCGWYSNPGQDPLGDQQVHSLTDFNNKMEEYQWQLAQG"
BASE COUNT          760 a         1238 c         1195 g          752 t
ORIGIN      
        1 cgccgcgctt tgctctatga cgtgagcgat gccgatgcga cagcaggcca catcacggtt
       61 ggcgtcgcca gcgtcagcgg ttggcgtctt gccggcgtgg tgggcatgcc tggcaaagcg
      121 caggagtggg ccaccgatct gcagggcaaa gtcccggagc acattgttcc cgacggccca
      181 cttacacccg acggcagtat ttccgtccgc atgattgcga atccgacaac cgcggcaaat
      241 ccggccgtga aaaccggtgc taaaccagcc ctcacaggag ccgcacgatg agcacgattc
      301 ccactcccgc gcccccgatt ggttcgatgt atctgttcga ttgcgtgacg ccgcccctgg
      361 tcgacgggag ctatcgcatt gacgtggtca ccaacgtgac ctatgacggg aacccggcgc
      421 ctctttcgtc gaacagcggc tacttcgaca ttgaaggtcc ccgcttcacg ctgccggcta
      481 ccgatgttgc cgcggtctat ccgccgaaca acggccacgg cggtttcgac gagtacatcc
      541 cacaagttgt tcttgcgcgg cgcactttac cgtgggagcg gcgcctcact tccaacccca
      601 gcgccatcgg cacgcctgcg cgcgatcaat ggactcctca gcccgatccc tttcctcagg
      661 tacagaacga gccgcaggag tacggccctg cgccgtggct cgcgctgctg gtttttcagg
      721 agggcgaata cacactgcac cagaacgtcg ctctgaggag cgttgtcccc gcggatgtgt
      781 atgcgcggct ggaagttgct gacggaatca cctgcgattc gatcgaagtc gaatatagct
      841 tgctggagtc agtgcttccc agcctcgacg agcttacgct gctggcccat gttcggcagg
      901 tgaacgtcaa cgacaaggag ctaaatgcgg cttccggcga cggcctgtac gcggtgctga
      961 tgagcaaccg cattcctgcg ccgaacgcga agttccgggc atgcctggtt tcgctcgagg
     1021 agcgcacgga ccttgtcaag gcggatccgc cgccggtcgc tatgccgatc ttcatcggcg
     1081 tcctcgagaa tcccgtgatc ggccaactcg attcggcgag gccgaccgaa caacagcctg
     1141 ccttgccagc tttcgaagcc accgcaagga tgagttccgg cacgccgcag cagacgctca
     1201 tcaatcccat cgggagcaag gtgctggcta ccgttgcgga ccgcaacgtc gcaccctctc
     1261 tcaatctcac gcgggtgcct ccgtaccacg tgtttatcgg aacgaaacag ctggttcttc
     1321 tctacagctg gcagttcgag tgcacaggcg tggggacgtt ccgcgattat gtgcagcgca
     1381 tcaacgtttc gacgatgggc accgttgaag aaccggggca tccgccggtt atcgatacgg
     1441 gacacatccc gatgacagtg atggatcgag ctggagtgga ggaggatgtg tggtatcgcg
     1501 gcccgttcgt tcccatgccg ctgacccggg acgcgctgac ctaccacagc gcggaccagt
     1561 gccgtcgcgt cacgcctgaa acgggggcgg aagatatcag ctatgctgcg gcgtttgagt
     1621 gcggacgatt gatggcggcg gccgatcctc gtctggcgca ggagttgatg cgatggcggc
     1681 gtgagccgta tcggcaatcg gtgcggaccg actcgttgct ggcaattcag gcggcgatcc
     1741 cgctggacca gacgctggac attcacaaac cggtggtccc ggtggtagcg gccaatgcgg
     1801 cgggcagcat cgttgccggg gttgagttgg tcggcgataa gtacggaatt ggactggtga
     1861 gccacgctcc ggggcttgat cctggacaac tgcaacaggc gtggaacctg tcgagcgtcg
     1921 ccgaagcgac ggcgattctt ggcggcgaat ccggagcgac cggagcggtg gtcacggctc
     1981 cagcgcagac ggttcgcacc gcaacgactc tggaccaggt cgccgccgat accacttcac
     2041 tcaaccgcct gcagtctgct cgcgatcagg cgctcaacac tgtgcagctg caaatgggga
     2101 aataaccgat gcgcacggcg tggatccaat cgagcaccgc actgaaggaa cgccttctcc
     2161 gtccgatcca gctcgacacc accgaggcgg agtcggagat gcctccttat atggagctgt
     2221 tcctatcgca tcttcggctg ctggtcgggg tgcctttcga ttacctcgtc cccgacgatc
     2281 ggctgctgcc ggacgaatcc attcggttct tctacatcga tcgctcgtgg accgatcgcc
     2341 tggtggatgg ggctatcgcg gtgggaaaga tcggtactcg cgaacaagct catcaccagg
     2401 gacacgcgcc tgccgtcaac cagcaggttg acctgagcga gcgcatcgtg cgtaccatcc
     2461 agcgcggact gcaatccttc accgatgcga aaacggggaa cgacggaaag gccgccccgg
     2521 ccgataccat caccggcttc ctgctgcgtt cctccgcggt cagcggctgg ccgcatatgg
     2581 acgtacgcgc ttataagact gacgtcgccg agccgtttga tccggccgac gcgaaagcgc
     2641 agtcacaaca actgatcaca ctgcggctcg aacttctctc accgggattg atgattgcgc
     2701 ttttccaggg cgttccccag ctggtgattc ttgaagagcc gcacaacggg gtgatgttcg
     2761 gcgtgcatgt cgataacgga gtggacaaag tttatctgcg cgacaacacc ggacatcaga
     2821 tcccaattcc tccgatcccg tcaccgcctg cgtcgcccaa ctactacgac gccgcgattc
     2881 cgtttcggtc caccaacagc cgagtggttc acgtgaccga attgcgccgc cggctgaatc
     2941 aggccatcgc gcagcatccg acgcaggtca acattacggg ctcagcaagt tttgccattg
     3001 ctgtcctcga tcctccgtgg cgccagcgtt tcgagggaac ggtcgacaaa gcaggcacgc
     3061 aggatacttc gggcggattc gtcgcgaacc tgcagatcgc ccagcgagtc gccgaaaact
     3121 cgaccttcga tgaggtcaga aatctggtga cgacgtatgg ccattagcac cagactctcg
     3181 tttaccgacc aggcggcggc gttttctgtg gcggccgctt atcggatcac gccgaaagtg
     3241 atcggcacgt ggaatccgta cctcatccgc accccacgcg tgcttgtgcc catgcaggtg
     3301 gatgcgctgg ttgtgcgtcc aaacgagccg gcgcaaagct gggcggactg cgcgctcaag
     3361 ccggatccgc agcaaaccac acgggtcacg cgctacgaca ttttgcccac gcccttcgcc
     3421 gaattgaagc agacacggac ggccggcgtt tatctccact gggcgctgcc cgatgcgctg
     3481 acccatggct atgcggatgc gacaggcaat acgacgacgt tcccggccgc gcccgatcgc
     3541 tggctcatcc tgcgcacgta tccatcggcc accacgttgc gtgccgcggc cgggaccgtt
     3601 ggtctgcgtg gcgtcaaggg atgggtactc cgcgccggcg accagaaccc tgtgccgatt
     3661 gatctggatt cgttcagcga aggtgctcca tcgcaggacg cggtcaacaa tccgctgacg
     3721 gttttgggaa ccggcgatgt ggcatgggcc gcctactacg acaactgtgt caaccgactg
     3781 gcgttctatg acagcctgag cgacatctcc gaagggccgg tcagttattt ggtctgcggc
     3841 tggtactcca atccaggcca ggatccactg ggcgatcagc aggttcactc gctcaccgac
     3901 ttcaacaaca agatggagga gtatcagtgg caactcgcgc agggt
//
LOCUS       DATAVD010001756         1521 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3705705, whole genome shotgun sequence.
ACCESSION   DATAVD010001756 DATAVD010000000
VERSION     DATAVD010001756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3705705"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1081
                     /locus_tag="VHX39_33610"
     CDS             <1..1081
                     /locus_tag="VHX39_33610"
                     /inference="COORDINATES: protein motif:HMM:NF014879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEX3996136.1"
                     /translation="TGPFAAGVMISASHNPYEDNGLKVVSHSGYKLADSVELELERHI
                     EEWLASGREAGSLALSPDTSLDHLYANYLASTVTGTFPMRLAIDCANGSATEVAPHLF
                     PRLGATVEWLGTSPNGRNINLDCGSLHLEKLQARVRETGADLGIAFDGDADRALFVAG
                     SGKVVNGDVVLFLTGTALKSAGHLPGDLVVATIMSNLGLEKALEAHGVKMLRTPVGDK
                     YVLEEMLKRGASLGGEQSGHVIFSDYATTGDGILTALRVLQILRDSGKTLDDVVDQVQ
                     TYPQKLVNIRVQHKRPLTELRTVQTEIAAAEQEFGGAGRVVVRFSGTEALARVMIEAT
                     SMEQVDKWTGRIAEAIRTELGSVPQ"
     gene            1193..>1521
                     /locus_tag="VHX39_33615"
     CDS             1193..>1521
                     /locus_tag="VHX39_33615"
                     /inference="COORDINATES: protein motif:HMM:NF017103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HEX3996137.1"
                     /translation="MERAARLIERDRRSQQILTADDMVRGVWPAAVGNAIARHTVRLK
                     VVRSTLVVEVEDATWQKQLFPLSSQIISRVQKLLGKSDIEHVEFRTAVLKRPMQRAGQ
                     VAADHPT"
BASE COUNT          357 a          412 c          461 g          291 t
ORIGIN      
        1 gaccggacct ttcgccgccg gggtaatgat ctcggcttcg cacaatccct acgaagataa
       61 cgggctgaag gtcgtcagtc attccggata taaattggcc gacagcgtcg aactggaact
      121 cgaaaggcac atagaagaat ggctggccag cggcagagaa gccggatccc tggcgctcag
      181 ccccgatacg agtctggatc atctctacgc gaactacctg gcgagtacgg ttacgggcac
      241 attcccgatg cgactggcga tcgactgcgc taatggctcg gcgaccgaag ttgcgccgca
      301 tctcttcccg cggctggggg cgacggtgga gtggttgggc acgtctccga acggacgcaa
      361 tatcaacctc gattgcggat ccctgcacct cgagaaactg caggcgcggg tccgcgaaac
      421 gggtgcggac ctcgggatcg cattcgacgg cgatgcagac agggcattgt ttgtcgcggg
      481 ttcgggaaaa gtcgtcaatg gcgatgtcgt actttttttg accggcacgg ccctgaagag
      541 cgcaggccat cttccggggg atctcgtcgt ggctaccatc atgtcgaacc tgggcctcga
      601 aaaggccctg gaagcgcatg gagtgaagat gctgcgcacg ccggttggag ataaatacgt
      661 gcttgaggag atgctgaaac gaggagcatc gctcggcggc gaacaatccg gccatgtgat
      721 tttctccgac tacgcaacaa ccggcgacgg aattctcaca gcgctccggg tgctgcagat
      781 tctccgtgac tccggcaaga ctctagacga cgtggtggac caggtccaaa cgtatccgca
      841 gaagcttgtg aacatccgcg tacagcacaa gaggccgctc accgaactga gaacggtgca
      901 gaccgagata gcggcagccg agcaagaatt cggaggggcc ggacgggtgg tggtgcggtt
      961 ttccggaacg gaagcacttg cccgcgtcat gattgaggca acttccatgg agcaggtaga
     1021 caaatggacg ggtcgaattg cagaggcgat tcgaacggag ttgggctccg taccgcaata
     1081 aatatcacag acgcaatcgt cacaataccg gtcgattgcc cgtgatacac tgcaatctcc
     1141 gatcagcttt cctccccctt gctgctcatc ctttcagaac aggtttgtca ctatggagcg
     1201 cgctgcaaga ctaattgaga gagacaggcg ttcgcagcaa attcttacgg ccgacgacat
     1261 ggttcgcggc gtgtggcccg cggctgtcgg aaatgcgatc gcccgccaca cggttcgtct
     1321 caaagtagtc agatcaacgc tggtggtgga agtagaagac gccacatggc agaaacaatt
     1381 atttccattg agtagccaaa tcatatctcg cgtgcagaaa ctgcttggaa aaagcgatat
     1441 tgaacacgtc gagtttcgaa cggcggtgtt gaagcggccc atgcagcggg ccggacaagt
     1501 ggcagcagat catcccacca a
//
LOCUS       DATAVD010001757         2251 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1096940, whole genome shotgun sequence.
ACCESSION   DATAVD010001757 DATAVD010000000
VERSION     DATAVD010001757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2251
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1096940"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..742
                     /locus_tag="VHX39_33620"
     CDS             <1..742
                     /locus_tag="VHX39_33620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996138.1"
                     /translation="LPLSAMAGFLVLTALITAGGRLPFGLQNVFQDRYATNGLLALFC
                     VTAIGIMNLSGDRSWFIGGMTALPVLGLLLVQVNALHPDSNFLFQQKLAGVALRVGAW
                     DDDSLQALIGNSDYIRQIAPRAKAEHLSIFANNALGFDAIPDKVSPSSKCVGNIESIT
                     DTKTPGIKAASGWIYDPLYHEIPANILLVNTSGHVVGQGITGLGRSDVAQVLGLKKGH
                     FGWKGFFRDDGGPIKLYAKAGSGYCAVP"
     gene            943..1236
                     /locus_tag="VHX39_33625"
     CDS             943..1236
                     /locus_tag="VHX39_33625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996139.1"
                     /translation="MPSLVDCIADAFVSFIDRYGTLFRTRAHDHAGVVQRYLQGLAQA
                     ATATFTETAFVVEDGCEQQFQHFISNSPWRHAPVVEQVGHDADRLLGGSRTAH"
     gene            1278..2057
                     /locus_tag="VHX39_33630"
     CDS             1278..2057
                     /locus_tag="VHX39_33630"
                     /inference="COORDINATES: protein motif:HMM:NF024935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX3996140.1"
                     /translation="MGVARQWCGRLGGGSQGSVHASERKAAGGKIDNCQVAVFAVLTD
                     GGRHTPVDMRLYLPQRRIEDAKRCDPAEVPLPAGGLRPKRQLALEMVHAARTRGMRFG
                     WIGADGGYGREPAFLRALDDADEVFVADVPCTQRVWREPPGLHVPTPKTRRGRPPGRQ
                     RAATDDPSVARLVAELPAADWTRGILRDSTRGPLTVDIAHRRVWVWDGEDAAARCWHL
                     IIRREVGAPGKLRFSLSNAAPETPPQRLAGLTPGRDNVWLG"
     gene            2045..>2251
                     /locus_tag="VHX39_33635"
     CDS             2045..>2251
                     /locus_tag="VHX39_33635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996141.1"
                     /translation="MAGITPGRDAGQRYWAERAFADAKGECGLADYPVLAWRAWHHHV
                     TMVTLAMLFIAEQRVAHRPGLALLT"
BASE COUNT          412 a          666 c          737 g          436 t
ORIGIN      
        1 gcttccgttg agcgccatgg caggatttct cgtactgaca gcgctgatta cagccggcgg
       61 ccgcttgccg tttggacttc agaatgtctt tcaggaccgt tacgccacga atggactgct
      121 tgcgctcttc tgtgtcacgg caattggcat tatgaatctc agtggggacc gtagctggtt
      181 cattggaggt atgacggccc tgccggtcct tggtctgctg ttggtccagg taaatgcact
      241 ccatccggat tcgaatttcc tatttcaaca gaaacttgcc ggcgtcgcac tgcgtgttgg
      301 tgcgtgggac gatgacagcc tacaagcctt gattggtaat tcggattaca tcaggcaaat
      361 cgccccgcgt gcaaaagcag agcatctttc aatcttcgcc aataacgcgc tcggtttcga
      421 cgcgattcca gacaaagtca gtccctcatc aaaatgcgtg ggcaatatcg agagcatcac
      481 ggataccaaa actcccggta tcaaggcagc gagcggctgg atctatgatc cgctttatca
      541 tgagataccc gcgaacatcc ttctcgtgaa tacctcgggg cacgtggtgg gacaaggcat
      601 caccggctta gggcgatccg atgtcgcaca ggttcttggt cttaaaaagg gtcacttcgg
      661 atggaaaggc ttttttcggg atgatggcgg ccccatcaag ctttatgcca aggcgggctc
      721 gggatattgt gcagttccct aatttgacga agtcacgcct gccggaacga tcgccctgtg
      781 ccgaggtggc cttgcgagaa gccagagaac cggctcccct ccggatcccc cttgacggcg
      841 gaatcggatg tcaaatcaat gcgcctcctc gacatcggta gccagaggag gcgaaatgac
      901 tggtgcagtt cgtcgggtga ccgtatgtgc gcatgatcgc tgatgccctc tctggtcgac
      961 tgcatcgcag atgcgttcgt gagcttcatt gaccgctacg gcacgctgtt tcgcacccgc
     1021 gcgcacgacc atgcgggcgt ggtgcagcgt tacctgcaag ggcttgccca ggcggcaaca
     1081 gcgaccttca cggagacggc gtttgtggtc gaggacggct gcgagcaaca gttccagcat
     1141 ttcatcagca actcgccgtg gcggcacgcg ccggtggtcg agcaggtcgg tcacgatgcc
     1201 gaccgcctgc tgggtggcag ccgaacagcg cactgagcat cgacgagagc agtttcccca
     1261 ggccggggga tcgttcggtg ggcgtggccc ggcaatggtg cgggcggctg ggcggaggca
     1321 gccaaggttc cgttcacgcc agtgaacgga aagcggccgg agggaagatc gacaactgtc
     1381 aggttgcggt cttcgcggtg ctgaccgacg gcgggcgcca cacgccggtc gacatgcggc
     1441 tctacctgcc acaacgccgg atcgaagatg cgaagcgatg cgatccggct gaggttccgc
     1501 tcccggcagg cggactgcgc ccgaagcgcc agctggcgct tgaaatggtg cacgcagccc
     1561 ggacgcgggg gatgcgcttc ggatggatcg gtgctgatgg cggctacggc agggaacccg
     1621 ccttcctgcg cgcgctggat gacgcggacg aggtgtttgt cgccgatgtt ccttgcacgc
     1681 agcgggtctg gcgtgaaccg ccggggctgc acgtgcccac gccaaagacc cgcagagggc
     1741 gaccgccagg ccggcagcgc gccgctaccg acgacccttc ggtggccagg ctggttgcgg
     1801 aacttcccgc cgcagactgg acccgcggca tcctgcgtga cagcacgcgg ggtccgttga
     1861 cggtcgatat cgcgcatcga cgggtctggg tgtgggacgg cgaggacgcg gcggcgcgat
     1921 gctggcacct gatcattcgc cgcgaagtgg gtgcgccggg caagctcagg ttcagcctct
     1981 cgaatgccgc ccctgaaacg ccgccgcaac gcctggccgg gctaacgcct ggccgggata
     2041 acgtttggct gggataacgc ctggccggga tgcggggcaa cgctattggg ccgagcgtgc
     2101 cttcgcagat gccaagggcg aatgcggcct tgccgattac ccggtgctgg cttggcgagc
     2161 ctggcaccat cacgtcacga tggtgacgct ggccatgctg ttcatcgccg aacagcgtgt
     2221 ggcacatcgg cctggtctcg cactgctgac c
//
LOCUS       DATAVD010001758         3595 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1283622, whole genome shotgun sequence.
ACCESSION   DATAVD010001758 DATAVD010000000
VERSION     DATAVD010001758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3595
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1283622"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..839)
                     /locus_tag="VHX39_33640"
     CDS             complement(<1..839)
                     /locus_tag="VHX39_33640"
                     /inference="COORDINATES: protein motif:HMM:NF033484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HEX3996142.1"
                     /translation="MALFRRTAARTAPAKTQGVAASAAYRLVGAMVSHPGKIRTNNED
                     TVAFALPNGNGGQSHDDALLVVADGMGGHAAGEVASRIAADVLYRSFFAAGGRPVHEV
                     LAECFDKANAEIFEAGRQNPEYAGMGTTCTAIAVRNNFAWLAHVGDSRAYLMRGDDFH
                     QISEDHTLVAELVRRGSLTREEAAASPERNVLLKAMGTAATVAPKIWDEGMALQPDDR
                     LLLCSDGLSDLVTDAMMQELIATRSPRQACDALIDAALEAGGHDNVSVGVFHLTDRVE
                     ADDV"
     gene            complement(857..2731)
                     /locus_tag="VHX39_33645"
     CDS             complement(857..2731)
                     /locus_tag="VHX39_33645"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEX3996143.1"
                     /translation="MATRIEIRHVAGSKANQIEQFQLDSLSELTIGRDPRSTIAFDAT
                     QDDRVSRNHAVIRIIKGDQLAFRITDLGSSNGTRVNGSRIDRETDLLPDDRIEFGSGG
                     PVIVFEVQPRPAYMVARTRITGAETMTPPAATRIEPPPIRPTALGAATSGSTVPPGTA
                     GAPMPPTKVGVGRETVQRMLGEERQATSQKWMYTLAGILVLVAVVGGGLWYKMSNDRQ
                     QALKLANEAQQAADTARMEAQKKSAELQAQVDKTSVEAARAKGMTPEEVAAKFRNATV
                     FVSFQWRLYDRVSLKPVFQKTISVGGELWNCYVKIGTDNNGNPRYVRWLTTEDEGRTN
                     QPIRGGGWGTGFVVNDDGFVLTNKHVAASWMTDFNQHAQYELEAKKGLWFPMLDGVPV
                     DPKTKRAVPVGQYISADAHKFGFNRPPSWIPEQGGIIFNSEYAVPTNDLNTPSFIGKD
                     EVLTARFPDSTLSVNAELVRASTKADVALVKISIPQKLSHVELAPVDNVVSQGAPITV
                     LGYPGTSADVVAFIKTQEAGHIGNLTERIPDPTVTPGVVSLLGRGRTETGDATIVSEM
                     GDAYQLTAGATAGNSGGPVFDASGKVIAIFTYGSSETENTTWAVRIQYGRALLDAQQQ
                     "
     gene            3276..>3595
                     /locus_tag="VHX39_33650"
     CDS             3276..>3595
                     /locus_tag="VHX39_33650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996144.1"
                     /translation="MRVAPIAAVPPYARGPLAGASFGLIILLSPIAFSANYLLVLFSL
                     TGLVIVVGGVIATAFMSFPAGDVHQALQAIPAMLRRPDAAPAGLRSDMIDIIRWARQI
                     RPNGV"
BASE COUNT          632 a         1131 c         1084 g          748 t
ORIGIN      
        1 acgtcgtccg cttcgacgcg gtcggtcagg tggaacacgc caaccgaaac attgtcgtgt
       61 ccgccagctt cgagcgcggc atcgatcagc gcgtcacagg cctgacgcgg cgatcgcgtg
      121 gcgatcagtt cttgcatcat cgcatcggtc accagatcgg acagcccgtc cgaacacaat
      181 aacaggcgat cgtcgggctg caatgccatg ccttcgtccc agattttcgg cgcaaccgtt
      241 gccgcggtcc ccatggcttt gaggaggacg ttacgctcgg gactggcagc ggcctcttcc
      301 cgcgtcagcg atccgcgccg caccagttcg gcaacgagcg tgtgatcctc actgatctgg
      361 tggaagtcgt cgccacgcat cagataggca cggctgtcgc cgacatgcgc cagccaggca
      421 aaattgttgc ggacggcgat cgccgtgcag gtggtgccca tcccggcata ttcgggattt
      481 tgccggccgg cttcgaagat ctcagcgttg gctttgtcga agcattccgc aagcacttcg
      541 tggaccggcc ggccgcctgc ggcgaagaag ctgcggtaga gcacgtcggc agcaattcgg
      601 ctcgcgacct ctccggctgc gtgaccgccc atcccgtcgg cgaccaccag caaagcatcg
      661 tcgtgggact ggccgccgtt gccgttgggg agcgcgaagg caacggtgtc ctcgttgttg
      721 gtcctgatct tgccgggatg gctcaccatc gcgccgacca gccggtacgc cgccgatgcc
      781 gcgaccccct gcgtttttgc cggtgccgtg cgggcagcgg ttctccggaa cagagccatg
      841 acgacggcgt tcgccgctac tgttgttgcg cgtcgagcaa agcccgtccg tactggatcc
      901 gcacagccca ggtggtattc tcggtttctg aggagccata ggtgaagatc gcgatgacct
      961 tgccgctggc gtcgaatacc ggaccgccac tgttgccggc ggtggcaccg gcggtcagct
     1021 gatacgcatc gcccatctcc gaaacgatcg tcgcgtcgcc ggtctcggtg cggccacggc
     1081 ccagaagcga taccacgcca ggcgtcacgg tcggatcggg aatacgctcg gtcaggttgc
     1141 cgatatgtcc ggcttcctgc gttttgatga acgcaacgac gtctgccgag gtgccgggat
     1201 agccgagcac ggtaatcggc gcgccctgtg agacgacgtt gtcaaccggg gcgagttcca
     1261 cgtggctgag cttttgcgga atgctgatct tgaccaaagc gacgtcggct ttggtggatg
     1321 cacgcaccag ttcagcgttg acgctcagcg tgctgtccgg gaaccgcgcg gtcaggacct
     1381 catccttgcc gatgaacgat ggtgtattaa gatcgttggt ggggaccgca tattctgagt
     1441 tgaagatgat gccaccttgc tcgggtatcc aggaaggcgg ccggttgaaa ccaaatttgt
     1501 gtgcatcagc ggagatatat tgtccgacag gcacggctcg tttggttttc ggatcgaccg
     1561 ggacgccgtc cagcatgggg aaccacagac ctttcttggc ttcgagctcg tattgcgcat
     1621 gctggttgaa atcggtcatc cagctggctg caacatgttt gttggtcagc acgaagccat
     1681 cgtcgttcac cacgaagccg gtgccccatc cgccgccgcg aattggttga ttggtgcggc
     1741 cttcatcctc ggtcgtcagc cagcgaacgt atctgggatt accgttgttg tcggtgccga
     1801 tcttgacgta gcagttccac agctcgccac ccaccgatat ggtcttctgg aaaaccggct
     1861 tcagcgacac gcggtcataa agccgccact ggaagctgac gaaaaccgtg gcattgcgga
     1921 atttcgcggc gacctcttcc ggcgtcatgc ctttcgcacg ggctgcctcg acactcgtct
     1981 tgtcgacctg cgcctgcagt tctgcgctct ttttctgggc ttccatgcgt gcggtgtcgg
     2041 ccgcctgttg ggcctcattc gccagtttga gcgcctgttg ccggtcgttg ctcattttgt
     2101 accaaagacc gccgccgacc acggcaacca gaacgaggat cccggccagg gtatacatcc
     2161 atttctggct ggttgcctga cgctcctcgc caagcatccg ttgcacggtc tcacgcccga
     2221 caccgacctt ggtgggcggc atcggcgcgc cggcggtccc cggcgggacg gtcgatccgc
     2281 tcgtcgccgc accaagcgcg gtcggcctga tcggcggggg ttcaatgcgg gttgccgccg
     2341 gaggcgtcat ggtctcagcg ccggttatcc gcgtgcgcgc aaccatatac gctggcctgg
     2401 gctgcacttc gaacacgata accggaccgc cggaaccaaa ttcgatgcgg tcatcgggca
     2461 acaaatcggt ttcccgatcg atccggctgc cgttcaccct ggtgccgttg ctgctgccca
     2521 gatcggtaat ccggaaggcg agctggtcgc ccttaataat gcggatcact gcatggttgc
     2581 ggctcacccg gtcgtcctgg gtcgcatcga atgcaatggt agagcgcgga tcccgtccga
     2641 tcgtcagctc gctcaggctg tcgagttgaa actgctcaat ttgattagcc ttcgagcccg
     2701 caacgtgacg gatttcaatc cgcgtcgcca tcgtgagtat cccccgctat tatcacccaa
     2761 attaacgtat aatgcgccac ttatggccat gtcgaattaa atattggccc ccacgcgtgt
     2821 aattacacca cgaacgatca ccaacggttg gggcaaaggt tcgttacaac caaaatttgg
     2881 ctccttgaag gaccggaact gttcagtact gttcatagca tcagactgag gcttgaaaac
     2941 atggtcaggt ctctgttttt agtatgcagg tgcgattgct ggacggaccg cagagccgat
     3001 cgcgatcacg ggtaaatccc gggtcgcctg tccgacctcc atggcgccat gcgcccggca
     3061 atgcatgcct ggcagcaccg gccggacgtg ccgggtcggg tttccggaaa ccaccaaccg
     3121 attgtcgcca gaacgcactg tctgcactgg cgggtctcac tcttcaggca ctgcaatagc
     3181 gggccggcat ggctggcacg gcggttgcgt ctgcgggact gggcggcaac cgcccaatcg
     3241 tccacgcccg atctcctcga aagcacccac ccatcatgcg agtagccccc atcgctgccg
     3301 tgccgcccta cgccagaggt cccttggcag gcgcgagctt cggactgatt atcctgctga
     3361 gcccgattgc gttcagcgcc aattacttgc ttgtgctgtt cagcctcacc ggcctggtca
     3421 tcgtcgtcgg cggagtgatc gcgaccgcgt tcatgagttt tcccgccggc gacgtgcatc
     3481 aggcgttgca ggccatcccg gcaatgctgc gacgacccga cgctgcaccc gccggcctcc
     3541 gctccgacat gatcgacatc atccgttggg cgcggcagat ccggccgaac ggggt
//
LOCUS       DATAVD010001759         4926 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2773239, whole genome shotgun sequence.
ACCESSION   DATAVD010001759 DATAVD010000000
VERSION     DATAVD010001759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4926
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2773239"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2700
                     /locus_tag="VHX39_33655"
     CDS             <1..2700
                     /locus_tag="VHX39_33655"
                     /inference="COORDINATES: protein motif:HMM:NF026220.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YCF48-related protein"
                     /protein_id="HEX3996145.1"
                     /translation="HVADHQEPTPQPDQANLVRIMRRRASVLRVQVRICVVLLAMLLA
                     GGGVIFLDAQNIAINEAARLTPQAPAPVVAINPSGAVKPDTVETYEARLKQDRESVAT
                     SRLRIANRVAMDVKLNRQRLGSFGADTSITSVWFTDPSHGWAAGINGTILLTTDGGAT
                     WRTGQSSTRNDLFCIRFIDQQRGWAVGDKGTILTTDDGGATWTPHDSLVPVTLTGVAF
                     ADRSHIWAVGGAGTIVASSDGGATWRRTASGVEGALTAIYFSGLAHGWAVGLNGTILS
                     TRDAGTTWQKHETGVSASLASVYFTDPAHGWVVGGGGTILGTLDGGATWWKRQSGTGN
                     SLTEVQFVDAKHGMTVGREGTILLTADGGFTWQPAGGQPAGGQAAGGPDASKPAVSVP
                     GIVTSNDLYGAHYADPIHLWAVGVKGTMLASTDGGVGWRLSESGVASPLAAVSFFGPG
                     NGWAVGDAGVIQTTTDGGANWTKASSGTREDLRGVAFSGPRQGWAVGVHGTILATGDG
                     GSIWRAQSSGINTAITGVAAVNDTSVWAVGAAGAIIHSTDGGTTWQRQSSPTRADLHA
                     VSFVGPSTGWAVGNDGTILATTDGGTSWRLRGGAVRDDLLALYFVDSGHGWAVGTTGT
                     VVATTDGGVTWSRRDSTSQFDLHGVRFADTMRGWAVGVHGTLLITDDGGLTWHAHNAG
                     TSAPFLGLVAAGTRRYWAPSGDGSVLTIVVPDTSAILAAEHLPEMRTALRSVDVSDAT
                     IFQRLTDFATADADLTERSNQAQRRTMAAADPVPSQIMLAGNADLVRDLAFQTAVMRI
                     GITIFVLAAAAILGAIARRGMRLSTHIDAFADALVLSGGAADAGFMDLARTLSPSGTV
                     SHDLVAAAQPGSEWRQTLQHSRGVKEVAADLISATKRLFGVRL"
     gene            2862..3257
                     /locus_tag="VHX39_33660"
     CDS             2862..3257
                     /locus_tag="VHX39_33660"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3996146.1"
                     /translation="MPGHLNRIGQIALAVSDVDRAEQFYQDTLGLRRLFRFGDLTFFD
                     CAGVRLLLEKAHDPQAVNQGSPIYFCCADLALTVRALQQRGVAFAEPPHLVAAMDDHD
                     LWMAFFQDPDGHTLALMQEAPKGYTPPPE"
     gene            3268..4116
                     /gene="folP"
                     /locus_tag="VHX39_33665"
     CDS             3268..4116
                     /gene="folP"
                     /locus_tag="VHX39_33665"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEX3996147.1"
                     /translation="MNMPATPHQSTPMIWAGLSLDRPRIMGVLNVTPDSFSDGGRVEP
                     EIAIAAGLAMWADGADIVDVGGESTRPGALPTGVEIELARILPVIAALAAAGVRISVD
                     TRHAATMAAALDAGAAIVNDISGLRHDMASASLVASRRCPVILMHMRGTPATMMGLAN
                     YNDIAAEVAAELTTRIQAAGNAGIRREAIAIDPGFGFAKHPPDSLALLRNLTRLTELG
                     LPIIAGVSRKGFIGAASGEEQPASRFPGSIAAGLFALSQGASVLRVHDVKATVQAVRV
                     WHTLCE"
     gene            4186..>4926
                     /locus_tag="VHX39_33670"
     CDS             4186..>4926
                     /locus_tag="VHX39_33670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014457598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEX3996148.1"
                     /translation="MSTPRRLFGTDGIRGKANTEPMTAGVALRLGQAAGLMFSRGNQR
                     HRVVIGKDTRLSGYMIEPALTAGFTGAGMDVTLLGPLPTPAVAMLTRSLRADLGVMIS
                     ASHNAFEDNGIKLFGPDGNKLSDDMESEIEALMDTQLHMQLAAPAKLGRANRLDDAGG
                     RYIEAAKASFPRGLRLDGLKIVVDCAHGAAYRVAPSVLWELGATVIRTGVEPDGFNIN
                     KGCGSTVPEHLCAMVTEHQADLGIALDGD"
BASE COUNT          831 a         1526 c         1641 g          928 t
ORIGIN      
        1 catgtggccg atcaccagga gccgacgcct caacccgacc aggccaacct ggtgcggatc
       61 atgcggcggc gtgcgtctgt gctgcgtgtt caggtgagga tttgcgtcgt gcttctcgcg
      121 atgttgctgg cgggcggcgg cgtgatcttc ctggatgcgc agaatattgc aatcaacgaa
      181 gcggcccggt tgacgccgca ggcgccggca ccggtcgttg cgatcaatcc atcaggcgcc
      241 gtcaaacctg acaccgttga aacttatgag gcccgtctga aacaggaccg agagtccgtg
      301 gcgacctcgc gcctgcgcat cgccaatcgc gtcgcgatgg acgtcaaact gaaccggcag
      361 cggcttggca gcttcggcgc tgacacctcg atcaccagtg tctggttcac cgatccgagc
      421 cacggctggg ctgccgggat caacggcaca attctgctga ccaccgacgg cggtgccacg
      481 tggcgtaccg gacagagcag cacccgcaac gatctgtttt gcatacggtt catcgatcag
      541 cagcgcggtt gggcggtggg tgacaagggc acgatcctga ccactgacga tggtggcgcg
      601 acctggacgc cacacgacag tctggtgccg gtgaccctga ccggcgtggc gttcgccgac
      661 cgctcccaca tctgggctgt cggcggcgca ggcacgatcg tcgccagttc agatggtggc
      721 gcaacgtggc ggcgcacggc cagcggcgtc gaaggcgccc ttaccgcgat ttatttttcc
      781 ggtctggcgc acggttgggc ggttggcctc aatggtacga tcctctcgac ccgggatgcc
      841 ggcacaacct ggcagaagca cgagaccggc gtgtctgctt ctctggccag tgtatacttc
      901 acggatccgg cgcatggctg ggtcgtaggc ggcggcggta ccatcctggg cacgctcgat
      961 ggcggcgcga cctggtggaa gcgccagagc ggcaccggca attcgctcac cgaagtgcag
     1021 ttcgtcgacg cgaaacacgg catgacggtc ggacgcgagg gcaccatctt gctaaccgct
     1081 gacggcggat tcacgtggca accagccggg gggcagccag ctggcggaca ggccgccgga
     1141 gggccggatg cgtcgaagcc tgctgtttcg gtgcccggca tcgtgacctc caacgatctc
     1201 tacggcgcgc actatgccga tccaatccat ctgtgggcgg tcggggtgaa gggcaccatg
     1261 ctcgcgtcca ccgacggcgg cgtgggctgg cggctaagtg aaagcggcgt ggcgagcccg
     1321 cttgctgccg tttcattctt cgggcccggc aacggatggg ccgtcggcga tgcgggcgtg
     1381 atccagacga ccacggatgg cggcgcgaac tggaccaagg cctccagcgg cacacgagaa
     1441 gatttgcggg gggtggcttt cagcggtccc cgccagggtt gggccgttgg ggtgcatggc
     1501 acgatcctgg cgaccgggga tggcgggagc atctggcgcg cccagagcag cggtatcaac
     1561 accgcaatca ccggcgtggc cgcggtgaac gatacctccg tctgggctgt cggcgctgct
     1621 ggcgcgatca tccacagcac ggatggtggc acgacatggc agaggcaaag cagtccgacc
     1681 cgggctgatt tgcacgcggt atccttcgtt ggtccgtcga ccggttgggc cgttggtaac
     1741 gacggcacga tcctggccac cacggacggt ggcacctcat ggcggctccg cggcggcgca
     1801 gtgcgcgatg atctgcttgc cctgtatttt gtcgattccg gccatggttg ggcggttggc
     1861 acaaccggta cggtcgttgc cacgaccgat ggcggcgtca cctggtcacg gcgtgacagc
     1921 acctcgcaat tcgatctgca cggcgtccgg tttgctgaca ccatgcgagg ctgggccgtc
     1981 ggcgtgcatg gcacattgct gataacggat gacggcggtc tgacctggca tgcccataac
     2041 gccggcacct ctgcaccatt cctcggtctg gtggcggccg gcacgagacg gtactgggcg
     2101 ccgagcggcg atggctcggt gctcacgatc gtggtgcccg acaccagcgc catactggcg
     2161 gccgagcacc tgccggaaat gcgcacggcc ctgcgctccg ttgacgtcag cgacgcgacg
     2221 atttttcaaa ggctgaccga ttttgccact gcggacgccg atttgaccga gcgttcaaat
     2281 caggcgcaac gccgtaccat ggcggctgcg gacccggtgc cgtctcagat catgctggct
     2341 ggcaacgccg atctggtgcg cgacctggcg ttccagaccg cggtcatgcg cattggcatc
     2401 acgatcttcg tgctggcggc agcagcgatc ctcggcgcaa ttgcgcggcg cggcatgcgc
     2461 ctgagcacgc atatcgacgc cttcgccgat gcattggttc tgagcggcgg cgcggccgat
     2521 gcgggtttta tggacctggc tcgcacgttg tcgccatccg gaacagtttc gcacgacctg
     2581 gtcgcggccg cgcagcccgg gtcggagtgg cggcaaacgc tgcaacatag ccgcggtgtc
     2641 aaggaggttg ccgccgacct gatcagcgcg acgaagcggt tatttggcgt caggctttga
     2701 tcaaaggtca aactgacctg gtgcaatgaa aagtgcgctc tgagcttcac cgaaatgaat
     2761 tccctgtcct gcttcagggg aaccaggtgc gatccaattc tatcggcgtg tgcatcggtt
     2821 gcgtagaatt cctcggtcgc tcgaatagga tggagggtag catgccgggt catttgaatc
     2881 gcatcggaca aatcgccctg gcggtcagcg atgtcgatcg cgccgaacag ttttaccagg
     2941 atacgcttgg tttgcgccgt ttgtttcgct ttggcgacct gacctttttc gattgcgccg
     3001 gcgttcggtt gctgctggag aaagcccacg atccgcaggc ggtcaaccaa ggctctccga
     3061 tctatttctg ctgcgccgat cttgccctga ccgtgcgggc cctgcagcag cgaggcgttg
     3121 cgttcgccga gccgccgcac ctcgttgcgg ccatggacga tcacgatctc tggatggcgt
     3181 ttttccagga tccggatggc cataccctgg cgctgatgca ggaggcgccg aagggctata
     3241 ctccgccacc ggaatgaacc caccgggatg aacatgcctg ctacgccaca ccaatccacg
     3301 ccaatgatct gggctggtct gtcgctcgac cggccgcgga tcatgggcgt gctgaacgtc
     3361 acgcccgaca gtttcagcga tggcgggcgt gtcgaaccgg agatcgccat tgccgccggc
     3421 ctcgccatgt gggccgacgg tgccgatatt gtcgatgtcg gcggggagag tacccggcca
     3481 ggggcattgc cgaccggggt ggagatcgag cttgcccgga ttctccccgt gattgctgcg
     3541 ctggctgccg ccggtgtgcg catttccgtt gatacgcgcc acgccgcgac catggcagcg
     3601 gcgctcgatg ccggtgcggc gatcgtgaac gacatttccg ggttgcgcca cgacatggca
     3661 tccgcgtcgc tcgtcgcgtc gcggcgctgt ccggtgattc ttatgcacat gcgcgggacg
     3721 ccggcgacga tgatgggttt ggcgaactac aacgacatcg cggccgaggt cgccgccgaa
     3781 ctgacgaccc ggatccaggc cgccggcaac gccggcatcc ggcgggaggc aatcgccatc
     3841 gaccccgggt tcggttttgc caagcatccg ccggactcgc tggcgttgct gcgaaatctg
     3901 acccgtctga ccgagctggg tttgcccatc atcgcaggcg tgtcccgcaa aggctttatt
     3961 ggcgccgcca gcggtgagga acagccggcc agccgcttcc ccggctccat cgccgcgggt
     4021 ttgtttgctc tgagccaggg cgcctcggtg ttgcgtgtgc acgatgtgaa ggcaacagtg
     4081 caggcggtcc gtgtctggca cactctctgt gaatgattga tgacgaaact gttggcttgc
     4141 tgttatactc cgtccattat catgagacat tcgcagggag ataatatgag cacccccagg
     4201 cgcttgtttg gcactgatgg aatccgcggc aaggccaaca ccgagccgat gaccgcgggc
     4261 gttgcattac gacttggtca ggccgccggg ctgatgttca gccgcggtaa tcaacggcat
     4321 cgggttgtca tcggcaagga caccagactg tcgggctata tgatcgaacc cgcgctcacc
     4381 gccgggttca ccggtgccgg catggacgtc acgctgcttg gcccgctgcc gacccctgcc
     4441 gtcgccatgc tgacccgcag cctgcgtgct gacctcggcg tgatgatctc ggcctcgcac
     4501 aatgcgtttg aggacaacgg catcaagctg ttcggtcccg acggcaacaa actgtccgac
     4561 gatatggaga gcgaaatcga ggcgctgatg gatacccagc tgcatatgca gttggcggcg
     4621 ccggcgaagc tcgggcgggc caaccggctg gacgatgccg gaggccgtta tatcgaggct
     4681 gccaaggcca gtttcccgcg tggcctgcgg ctggatggtc tcaaaatcgt tgtggattgc
     4741 gcccatggcg ctgcctaccg cgtggcgccc tcggtgctgt gggaactcgg cgccaccgtg
     4801 atccgcaccg gagtcgagcc ggacggattc aacatcaata agggctgcgg ctcgaccgtg
     4861 cccgagcatt tgtgtgcgat ggtcaccgag caccaggccg atctcggtat cgcgctggat
     4921 ggcgac
//
LOCUS       DATAVD010001760         3129 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_539088, whole genome shotgun sequence.
ACCESSION   DATAVD010001760 DATAVD010000000
VERSION     DATAVD010001760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3129
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_539088"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="VHX39_33675"
     CDS             <1..330
                     /locus_tag="VHX39_33675"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEX3996149.1"
                     /translation="LMTLGIGLYAPCLILVGLLGMNPLAAFPIMMGSCAFVTPIGGVR
                     FIRSGRYNAPAALGLAIGGIPGVLIAAYVVKSLPIVWLRWLVVIVVLYAAALMLFSAW
                     RPQSRSR"
     gene            414..2402
                     /locus_tag="VHX39_33680"
     CDS             414..2402
                     /locus_tag="VHX39_33680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007398200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX3996150.1"
                     /translation="MHALRSYQFFARYGGLLFRRLRGPAAAFAVLGVLSFTSAFAQQN
                     AQTAPLVPDIPSKFQEATQDADYVKREVMIPMRDGAKLHTVIVIPKGAHGAPIILSRT
                     PYDASKRTARFDSPHMLATLPQGDDVLVEEGYIRVVQDVRGKYGSEGDYVMARPLRGP
                     LNASAVDHSTDAWDTIDWLVKNVPESNGKVGMVGSSYEGFTVLMALVNPHPALKAAVP
                     TNPMVDGWKGDDWFHNGAFRQSNLDYFHAQTTQKGRGGRVPRACYDDYTAFLDAGSAA
                     GYARQSGIDQLPFWKKLSEHPAYDAYWQGQALDTAIAAQPLKVPTLFVASLWDQEDMY
                     GAIAAYEAAEPQDTNNDTNFLALGPWRHSGVNYEGRGLGPLKFDGDTARQFRHDVMLP
                     FLDERLKDGAPKANTPPVFAYETGSDTWRRLEAWPLSCDSGCAAKPKKLYLEPAFGLG
                     FEAPTKTGVAYDEYVSDPAKPVPYQPRPVSFADGESWMRWLLMDQRFVDGRTDVLTYI
                     SAPLTAPLRIGGAPRVELYASTSGTDSDWVVKLIDVYPDEVPSQPELGGYELSIGMDI
                     FRGRYRESLEHPSAIPVGKVQRYHFALPNANHVFLPGHRLMVQVQSSWFPLYDRNPQT
                     YVPNIFFAAPQDYRKATQRVYHAGAQASSIELPVVPVN"
     gene            2566..3102
                     /locus_tag="VHX39_33685"
     CDS             2566..3102
                     /locus_tag="VHX39_33685"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEX3996151.1"
                     /translation="MNGNSSVLKGRSADRLTVEALARAHHSVLLRYFKKRGMREEDAE
                     DAVQEVFVRLSRRQGLAEIERIEGYLFETAASVAIDAQRHNRVRHSDSHDVYDDSRHG
                     KAERSSEAVFEGQEAVEQLLAALRELPDRTRAVFILARLEHLKQSEIAQQLGISVSAV
                     EKQLTKALAFLALRTSMP"
BASE COUNT          586 a          929 c          987 g          627 t
ORIGIN      
        1 ctgatgacgc tcggcatcgg tctgtacgcg ccgtgcctca tccttgttgg cctgcttggc
       61 atgaatccgc tggcggcgtt ccccataatg atgggctcat gcgcgttcgt gacgccaatt
      121 ggtggcgtgc gattcatccg cagtgggcgc tacaacgcgc cggcggcact aggattggca
      181 atcggtggta tccctggcgt attgatcgcc gcgtacgttg tgaaatcgct cccgatcgtg
      241 tggttgcgct ggctcgtcgt cattgtggtc ctgtatgccg cagctctcat gctcttctcg
      301 gcatggcgtc cgcagagtcg atcgcgatga gtttttttgc gacgcgcggt gtggatttcg
      361 cgccaggtcg cgtttctcta taagcggcca tgccgcgggg aaagtacaaa aaaatgcatg
      421 ccttgcggtc ctatcagttt tttgcacgat acggtgggtt gcttttccgg cgtctgcggg
      481 gcccggcggc cgcgttcgcc gtgctgggcg tgctgtcatt tacgagtgcc ttcgcccagc
      541 agaacgccca aacagcgccc ctggttccgg atatcccaag caagtttcag gaggcaactc
      601 aggatgccga ttacgtcaag cgcgaggtaa tgattccgat gcgcgacggc gccaagctgc
      661 atacggtgat cgtcattccg aagggcgcgc acggcgcgcc gatcatcctt agtcgcacgc
      721 cttatgatgc ctccaagcgc accgctcgct tcgacagccc gcacatgctg gcgacgctgc
      781 cacagggcga cgacgtactc gtcgaggaag gttatatccg cgtggtccag gacgtgcgcg
      841 gcaagtatgg ctcagaaggc gactatgtaa tggcgcggcc gctgcgcggc ccgctcaacg
      901 ccagcgcggt ggatcactct accgacgcct gggacactat cgactggctg gtgaagaacg
      961 tgccagagag caacggcaag gttggcatgg tcggctcctc ctacgagggc tttaccgtac
     1021 tgatggccct ggtcaaccct catccggcgc tgaaggctgc agtgccgacg aatccgatgg
     1081 tagacggctg gaagggagat gactggttcc acaatggcgc cttccgccag agcaacctcg
     1141 attacttcca cgcccagacc acgcagaagg gcaggggggg ccgggttcca cgcgcctgct
     1201 atgacgatta caccgcgttc ctcgatgccg gatcggccgc tggttatgcg cgccagagcg
     1261 gcatcgacca actgccgttc tggaagaagc tgtcggaaca cccggcctac gacgcctact
     1321 ggcaggggca ggcgctggat acggcgatcg ccgcgcagcc gctgaaggtg ccgaccctgt
     1381 tcgtggcgag cctctgggac caggaggaca tgtatggcgc cattgctgcc tatgaggcgg
     1441 cagagccgca ggatacgaac aatgacacca attttttggc gctgggcccg tggcgtcaca
     1501 gcggcgtgaa ctatgagggc cgcggcctgg ggccgctgaa gttcgacggc gataccgccc
     1561 ggcaattccg tcacgacgtg atgctgccgt ttctggacga gcgtctgaag gacggcgcgc
     1621 ccaaagcgaa cacaccgccg gtatttgcct acgagaccgg cagcgatacc tggcgccggc
     1681 tcgaggcgtg gccgttgtcc tgcgactcgg gctgcgccgc caaaccgaag aagctgtacc
     1741 tggagccggc cttcggcctg gggttcgagg cgccgaccaa gaccggcgtc gcctacgatg
     1801 aatatgtttc tgatcccgcc aagccggtgc cctaccagcc gcgaccggtc agcttcgcgg
     1861 atggagaatc ctggatgcgc tggttgttga tggaccagcg ctttgtcgac ggccgcacgg
     1921 acgtgctgac ctatatatcg gcgcccttga ccgcgccgct gcggatcggc ggagcgccgc
     1981 gggtcgaact gtatgcctcc accagcggta cggatagcga ctgggtggtg aagcttatcg
     2041 atgtctaccc ggatgaggtg ccgtcgcagc cggagttggg cggctatgag ctcagcatcg
     2101 gtatggacat cttccgcggc cgttatcgcg aaagcctgga acatccttca gccattcccg
     2161 taggcaaagt gcagcgttat cacttcgccc tgcccaacgc caaccacgtg tttctgccgg
     2221 ggcatcgcct gatggtgcaa gtacagtcga gctggttccc cctctacgac cgcaacccac
     2281 agacctacgt gccgaacatc ttcttcgcgg caccgcagga ctatcggaag gcgacgcagc
     2341 gggtatacca cgctggcgcg caggccagtt cgatcgagct accggtggtt ccggtgaact
     2401 gaagtgaaag cagcagatga ccgtcgctct tcatcgcggc cttaggatgg cgtctactcc
     2461 attgatttcg ttgagtaaat aatttcattt cttcactgtg gattcttgcg gggaagccgt
     2521 tcctgatacg atggccgcta aaggctcgca gtgggcattc gctagatgaa cggcaactct
     2581 tccgtgttga aggggaggtc cgcggacagg ctgaccgtcg aggcccttgc acgggcgcac
     2641 cattcggtct tgttgcgcta tttcaagaag cgtgggatgc gtgaagagga cgcggaagac
     2701 gcggtccagg aggttttcgt tcgtctcagt cgtcgtcagg gtcttgcgga gatcgagcga
     2761 atcgaggggt atctgtttga gaccgcggcc agcgtggcga tcgacgcaca acgacacaat
     2821 cgggtgcggc actccgattc ccacgatgtc tatgacgatt cgcggcatgg caaagcggag
     2881 cggtcctccg aagcggtatt cgagggccag gaagccgtcg agcaactgct cgcggcgtta
     2941 cgggagttac cggaccgaac acgcgccgtc ttcatacttg cccgcctcga gcatctgaaa
     3001 cagtcggaaa tcgctcagca gctcggcata tcggtcagtg ccgtagaaaa gcagctgacg
     3061 aaagcactcg catttctggc gctaaggacg agcatgccat gagaatattc cctttccaga
     3121 agcgatccc
//
LOCUS       DATAVD010001761         3140 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_914410, whole genome shotgun sequence.
ACCESSION   DATAVD010001761 DATAVD010000000
VERSION     DATAVD010001761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3140
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_914410"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..262
                     /locus_tag="VHX39_33690"
     CDS             <1..262
                     /locus_tag="VHX39_33690"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3996152.1"
                     /translation="QQGVRVNAVNPGLIETDRFTRNVERVMRERGFTRDEALTFLVSS
                     HRTTRVGRPEEIGAMVAYLASSKADFVQGAIIDVDGGATRSL"
     gene            complement(453..1469)
                     /locus_tag="VHX39_33695"
     CDS             complement(453..1469)
                     /locus_tag="VHX39_33695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3996153.1"
                     /translation="MSTSKWLKLACVPLCLAFLAPHRARAEANTVRIAQPYGLVYLPS
                     YVAVDRHLIEQRAAAAGLGPIKVTLTRLSSGPAGSDMLLAGDADLAMGGFGPALTLWD
                     KTHGANKVLGMMPLDSSPLFLISTDPRIHSLKDFTDKDRIAVSAIKVTDQAITLEMAA
                     AKEWGWDQRFRLDPLTVSMSNPDGEAALLGGLSEVRNQATIIPFSVDELESGKAHLVM
                     TSNDVMEPGSSSTVVYASARFHDKNPKLYAATAQAFEDAIVWINAHPHEAAEIYVARE
                     PTKKGVDWIEHMIRDPSLIRYSSTPRGMQVHADFMYKVGTLKHKAASWKDLFWDNMAG
                     KDGS"
     gene            complement(1682..2320)
                     /locus_tag="VHX39_33700"
     CDS             complement(1682..2320)
                     /locus_tag="VHX39_33700"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEX3996154.1"
                     /translation="MPDFFEIIGTTRSMRRLKPDPVPDELIKQILEAGTAAANGGNTQ
                     KWRFLVIKDPAIKKAVQVWYKKAFDEVIGPRYASSAPPPGVSPDRYGRQHGAVEYLTE
                     HFHEAPVWIVACLEDGPTPNRAAGASIYPAVQNMLLAMRALGLGSTLTTRHLLHEKEA
                     EAALGLPPGVHSYAILPVGYPMGKFGPVGRGKLSDFVFLDKWNQPYPAVAEG"
     gene            complement(2369..>3140)
                     /locus_tag="VHX39_33705"
     CDS             complement(2369..>3140)
                     /locus_tag="VHX39_33705"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX3996155.1"
                     /translation="GGGGIGRATALGFALRGAKVMVVDADADSGQASVDIIAQRGGTA
                     AFVQADVTKSASVKDYVEKTLAAYGRIDAFFNNAGIEGKVVPIQDYDEEVFDRVIAVN
                     LKGVFLGLRHVLPVMLKQGSGAIVNTASVAGLFGSPGMPAYVASKHGVLGLTKVASTD
                     VAGLGVRVNAVCPGPVETRMMRSLESQRNPNNPESIHAAYAAGIPTGRYALPEEIAGA
                     VLYLCSDLSGDVTGTHIVIDGGRSGSGGVAPVKRIQGA"
BASE COUNT          560 a         1070 c          920 g          590 t
ORIGIN      
        1 acaacaaggc gttcgtgtca acgccgtcaa ccccgggctg attgaaacgg accgtttcac
       61 gcgaaatgta gaacgggtga tgcgggaacg tggtttcacg cgtgacgaag cgctgacgtt
      121 tctggtgtcg tcgcaccgca ccacccgggt cggccgcccg gaggaaatcg gtgccatggt
      181 cgcctatctg gcatcgtcga aagcggattt cgtgcagggt gccatcatcg atgtcgatgg
      241 cggcgcgact cgatcgctgt agccgcgcca atactgtgga aagatgcgat ccgcggcggc
      301 agcgttccgc ggatcacgcc attgtacgcc gttgggccta tgctgccttc ctttgtatta
      361 agcgtagcgc gcaagatcga aattgccgaa ctcgttctct ttacgttttc atgcgctcgc
      421 acgatgcggc ttgccacccc gggtgaaagc gctcaactgc cgtccttgcc ggccatgttg
      481 tcccagaaca ggtccttcca gctcgccgcc ttatgtttca gcgtaccgac cttgtacatg
      541 aagtcggcgt gtacttgcat accgcgcggt gtcgaagagt aacggatcag cgagggatcg
      601 cggatcatgt gctcgatcca gtcgacgccc ttctttgtcg gctcgcgggc gacatagatt
      661 tccgccgctt cgtgcggatg cgcgttgatc cagacgatcg catcctcgaa cgcctgcgcg
      721 gtggcggcat agagtttcgg gttcttgtcg tggaaccgcg ccgaggcata gacaacagtg
      781 gatgacgacc ccggttccat cacgtcgttg gacgtcatca ccaggtgcgc cttgcccgat
      841 tccagctcat ccacagagaa cggaatgatc gtcgcctggt tgcggacctc actgaggcca
      901 cccagcagcg cagcctcgcc atcgggattg gacatcgaaa cggtcagcgg gtcgagccgg
      961 aaccgctgat cccagcccca ttccttggcc gccgccattt ccagggtaat cgcctggtcg
     1021 gtaaccttga tcgcgctgac agcgatacga tccttgtcgg tgaagtcctt caggctatgg
     1081 atgcgcgggt cggtgctgat gaggaacagc ggcgagctgt ccagcggcat catgccaagg
     1141 accttgttgg cgccatgtgt cttgtcccac agcgtcagcg ccgggccgaa gccgcccatt
     1201 gccaggtcgg cgtcgccggc cagcagcatg tcgctgcccg cgggcccgct ggacaggcgc
     1261 gtcagcgtca ccttgatcgg gcccaggccg gcggcggcag cccgctgctc gatcaggtgg
     1321 cggtcgacgg cgacatagct tggcagatac accaggccat aaggctgggc gatgcggacg
     1381 gtattcgcct ccgcccgggc gcgatgcggc gcaaggaacg ccagacatag cggaacgcac
     1441 gccagcttta gccatttcga agtggacatc ctgcttcccc gattgttctt ggctttgaga
     1501 taccgccggt gcgatgtcac cgcaacctgg ggatcaggct ttgtaatatg tttacttccg
     1561 gcttgtgtgc tgccgaagaa cagggccaca gtccagccaa ggataccgtg ccgttcggga
     1621 cgttaccaat gctgcatgca ccggccggac accgtcccct gtgtccggcc gcgtccggcg
     1681 atcagccctc ggcaaccgcc gggtagggct ggttccactt atccaggaac acgaagtccg
     1741 acagcttgcc gcgcccgacc ggaccgaact tgcccatcgg atagccgacc ggcaggatcg
     1801 cgtaggaatg cacgcccggc ggcaggccca gcgccgcctc ggcttccttc tcgtgcagca
     1861 gatgccgcgt cgtcagcgtc gaccccaggc ccagcgcccg catggccagc agcatgttct
     1921 gcaccgccgg atagatcgat gcgccagccg cccggttcgg ggtcggcccg tcttccagac
     1981 aggcgacaat ccacaccgga gcctcatgga aatgctccgt caggtattcc accgcgccgt
     2041 gctggcgacc gtaacgatcc ggcgacacgc ccggcggcgg cgcactgctg gcgtaacgag
     2101 gcccgatcac ctcatcgaat gccttcttgt accagacctg cacggctttc ttgatggccg
     2161 ggtccttgat caccaggaac cgccatttct gcgtgttccc gccattggcc gcggcggttc
     2221 ctgcttccag gatctgcttg atcagctcat ccggcaccgg gtccggcttc aaccggcgca
     2281 tcgaacgggt ggtgccgata atctcgaaaa aatcaggcat gcttgcgatc tccctgttgt
     2341 cttctcacgt gattcacacc gtcagcgatc acgctccctg gatccgtttc accggtgcaa
     2401 caccgccgga cccggaacgg ccgccgtcga tgacgatatg cgtgcccgtc acgtcgcccg
     2461 acaggtcgga gcacagatac agcaccgccc cggcgatttc ctccggcagg gcatagcgcc
     2521 cggtcggaat gcccgcggca taagcggcat ggatgctctc gggattgttc ggattccgct
     2581 gcgattccag cgaccgcatc atccgcgttt ccaccggccc gggacacaca gcgttgaccc
     2641 gcacgccgag cccggccaca tcggtcgagg caaccttcgt caaccccagc acgccatgct
     2701 tggatgccac ataggccggc atccccggtg atccgaacag ccccgcgacc gaggcggtat
     2761 taacgatcgc ccccgacccc tgcttcagca tcaccggcag gacatgccgc agccccagga
     2821 acacaccctt caggttgacc gcgatgaccc gatcgaacac ctcctcatca tagtcctgaa
     2881 tcggaacgac cttgccctcg atcccggcgt tgttgaagaa cgcgtcgatc cgcccgtacg
     2941 ccgccagcgt cttctccaca tagtccttca ccgacgccga tttcgtgaca tcggcctgca
     3001 cgaacgccgc cgtcccgccg cgctgggcga tgatatcgac gctcgcctgg ccggaatccg
     3061 catcggcatc caccaccatc accttcgccc cgcgcagcgc gaaccccaac gcggtcgctc
     3121 ggccgatccc gccgcctccc
//
LOCUS       DATAVD010001762         1531 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1284194, whole genome shotgun sequence.
ACCESSION   DATAVD010001762 DATAVD010000000
VERSION     DATAVD010001762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1284194"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VHX39_33710"
     CDS             complement(<1..317)
                     /locus_tag="VHX39_33710"
                     /inference="COORDINATES: protein motif:HMM:NF016424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HEX3996156.1"
                     /translation="MTAGAAAALVLCLVSLAFALDFPALSGRVVDQANVMTAQSRSDV
                     EAKLKNLDDKSGIQLVVATVKSLQGNDIETYANELFRFWKLGEAKKNNGVLLLVAPAE
                     HKVR"
     gene            complement(357..956)
                     /locus_tag="VHX39_33715"
     CDS             complement(357..956)
                     /locus_tag="VHX39_33715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004732432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEX3996157.1"
                     /translation="MPNVHFRVRTILAVIAIGLTLSACGYNTIPTLEEQAKARWSDVE
                     NQYQRRADLIPNLVATVQGYAKQEKDVLTAVVEARAKATQTKVDVSQLTDPDKLKQFQ
                     DAQNQLSGALGRLLAVTENYPDLKSNANFLALQSQLEGTENRIAVARRDYIDAVRAFN
                     TALRTFPTVIWAKTAFSGEKPMAEFTANQGASTPPSVKF"
     gene            1207..>1531
                     /locus_tag="VHX39_33720"
     CDS             1207..>1531
                     /locus_tag="VHX39_33720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEX3996158.1"
                     /translation="MSRSFSVLVRSILFNTLFYVNLLVHMIVALPTLALPSPVLLAFI
                     RSYARSSLWLLRVICGTKVEWRGRKKIPHGACIIACKHQSVWETFALYALLEDPTYIL
                     KRELMW"
BASE COUNT          266 a          461 c          469 g          335 t
ORIGIN      
        1 cgcaccttgt gttcggccgg cgcaacgaga aggagtacgc cgttgttctt cttggcctcg
       61 ccgagtttcc agaagcggaa cagctcattg gcgtaggtct cgatatcatt gccttgcagc
      121 gacttcaccg tggcgacaac gagttggatg ccggatttgt cgtccaggtt cttgagcttg
      181 gcttcgacgt cgctgcggct ctgcgccgtc atgacattgg cctggtcgac aacgcggcct
      241 gacagagcgg gaaaatcgag cgcgaacgcc agcgagacca ggcaaagaac aagcgcggcg
      301 gccgcgccag ccgtcattgc gccggaatga cgacaaggat tcatcttccg gtaccctcag
      361 aacttcactg acggcggcgt cgaggcgccc tggttggcgg tgaattccgc catcggcttc
      421 tcgccggaga aagccgtctt ggcccagatg acggttggga acgtgcgcag cgccgtgttg
      481 aaggcgcgca ccgcgtcgat gtaatcgcgc cgcgccaccg cgatgcggtt ctcggtccct
      541 tcaagctgcg attgcagcgc caggaaattg gcgttggatt tgagatcggg ataattctcg
      601 gtcaccgcca acagccggcc gagcgcgccc gacaactgat tctgcgcatc ctgaaactgc
      661 ttgagcttgt ccggatcagt gagctgggaa acgtcgactt tggtttgcgt agccttggcg
      721 cgcgcctcga ccacggcggt gaggacgtcc ttttcctgct tggcgtagcc ctgcaccgtc
      781 gccaccaggt tgggaatgag atcggcccgg cgctgatact ggttctcgac gtccgaccag
      841 cgcgccttgg cctgctcctc gagcgtcggg atggtgttgt agccgcatgc cgacagcgtg
      901 aggccgattg cgatcaccgc caggatggtg cgaacgcgga aatggacatt gggcatttcg
      961 cccctccgtt ttacggatgt cgcaccacgc tgcgatggca ggagcgtgat cgcgtcggat
     1021 cgaatcgatc gcgccaatgg tttcagcggg atcaccggca tcggcggaat ctatcggata
     1081 gagcgcacgg cgcaaagtgt gtgtcagttc cctttggagt cctatagtgg cacgatcatc
     1141 gctccggcat cgggcatttt cgcttcgcgg cgtcggtgag cggcccacag gctcgacagg
     1201 tccttcgtgt ccagatcgtt ttctgtcctt gtccgctcaa tcctgttcaa cacactgttc
     1261 tacgtgaact tgctcgttca catgatcgtg gcgttgccga cgctcgctct gccctccccg
     1321 gttctgctgg ccttcatacg ctcgtatgcc cgctcgagcc tctggctcct gcgcgtgatc
     1381 tgcggcacca aggtcgagtg gcgcgggcgt aaaaagatac cccacggcgc atgcatcatc
     1441 gcctgcaagc atcaatccgt gtgggagact tttgcgcttt atgccttgct tgaggatccg
     1501 acctacatcc tcaagcgcga actgatgtgg a
//
LOCUS       DATAVD010001763         1780 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_539432, whole genome shotgun sequence.
ACCESSION   DATAVD010001763 DATAVD010000000
VERSION     DATAVD010001763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1780
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_539432"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1337)
                     /locus_tag="VHX39_33725"
     CDS             complement(<1..1337)
                     /locus_tag="VHX39_33725"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEX3996159.1"
                     /translation="MLSLTVSQNSDQPLAAQIVAGVKRQIDDRHLRPGSKLPSIRSFA
                     DTYGVSRFTVVEAYDRLVALGYLQSRRGAGFYTSAGPAATHTAPSDDHKRNEQLVWLI
                     RQLLSADDKTVLAGGPWLPNSWLDEAGIRQSLNVLARKNGAYLLEYGHPFGYLPLREH
                     LALTLAGLGITAHAGQILLTQGTSQALELVIRYLLKPGDTVLVDDPGYYNMFGNLRLQ
                     RVDMLAVPRNPDGPDLAALEKLAAAHRPKVYFTQSVMQNPTGTDMSPHVGFKVLQAAE
                     RHNFTIVEDDIFSDLQVKPTPRLATLDQLNRVIYVRSFSKTLSGSLRVGFVACLQDTA
                     NQLADIKMLTSITTSQFTERLIYLMLVDGHYRKYLSRLHERLGAARLDVFRAFARIGL
                     ELFVEPADGMFVWARFPHIEDSLALAETARHGGLMLAPGTVFRPHLGRSPWMR"
     gene            1532..1756
                     /locus_tag="VHX39_33730"
     CDS             1532..1756
                     /locus_tag="VHX39_33730"
                     /inference="COORDINATES: protein motif:HMM:NF013522.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HEX3996160.1"
                     /translation="MPLIQVRVIKDVFSKQQKSQMISKLTDAMVSIEGENMRGVTWCV
                     IEEVESGDWGIGGNALTTADVHALAQGKAA"
BASE COUNT          350 a          513 c          576 g          341 t
ORIGIN      
        1 aaccgcatcc atggcgaccg ccccaaatgc ggacgaaaca ccgtaccggg cgcaagcatc
       61 aggcctccgt gccgtgccgt ttccgcgagt gcaagcgagt cctcgatatg cgggaagcgc
      121 gcccagacga acatgccgtc cgcgggctca acgaacaatt ccaatccgat gcgtgcgaag
      181 gcgcggaaaa catcgagccg agccgcaccg agccgctcgt gcaggcgcga caggtacttg
      241 cggtagtgcc catccaccag catcaggtag atcaaccgct cggtgaattg cgacgtggta
      301 atgctggtca gcatctttat gtcggcgagc tggttggcgg tgtcctgcag gcaggcgacg
      361 aagccgacgc gcaggctgcc ggacagcgtc ttggaaaagc tgcgcacgta gatcacacgg
      421 ttgagctggt cgagcgtggc caatcgcggt gtcggtttca cttgcagatc gctgaatatg
      481 tcgtcctcca cgatcgtgaa gttgtggcgc tcggccgcct gcaatacctt gaacccgaca
      541 tgtgggctca tgtccgttcc ggttggattt tgcattactg actgcgtgaa atacactttt
      601 ggccggtgcg ccgccgccag cttttcgagg gcagcgaggt ccggtccgtc ggggtttcgc
      661 ggcaccgcca gcatgtctac gcgttgcagg cgcaggttac caaacatgtt atagtagcct
      721 gggtcatcta ccaatactgt gtcgccaggc ttcaacaggt agcgaatgac gagttcaagc
      781 gcctggctgg tcccctgcgt cagcaagatt tggcctgcgt gggcggtgat gccaagcccg
      841 gccagcgtca acgcgaggtg ctcgcgcaat ggcagatacc cgaatggatg tccgtattcg
      901 agcagataag cgccattctt gcgggcgagt acgttaaggc tctggcggat gccggcttcg
      961 tcgagccacg aattcggcag ccacgggccg ccggcaagca cggttttgtc gtccgcgctg
     1021 agcagttggc ggatcagcca gacgagctgc tcgttgcgct tgtggtcatc ggacggcgcg
     1081 gtgtgcgtcg cggctggtcc ggccgaggtg tagaagccgg cgccgcggcg tgattgcaga
     1141 tagcccaatg ccaccagccg atcgtatgcc tcgaccaccg tgaagcggct gacgccgtag
     1201 gtgtcggcaa aactgcgtat cgacggcagt ttgctgcccg gccgcaagtg ccgatcgtcg
     1261 atttgccgct tcacgcccgc gacgatctgc gcggcgaggg gctggtcgct gttctggctg
     1321 acagtcagtg agagcatgtc ggttcctgct acgcctcgga ctggcctggt cacagaacca
     1381 gtacagtgac gccagttgac gtcaaaactg tctattactg tgcgtccaag tgttcggcag
     1441 gatgcagggg gtgtcaagca gcgaccggca aggtcagctt tcaccaaggc gctcgaacat
     1501 caatcccatc gaccacacaa ggaggtatgc aatgccgctc attcaggttc gcgttatcaa
     1561 ggatgtgttc agcaagcagc agaaaagcca gatgatcagc aagctgaccg acgctatggt
     1621 ctcgatcgag ggcgagaaca tgcgcggcgt tacctggtgc gtgatcgagg aagtggaaag
     1681 cggggactgg ggaattggtg gcaacgcgct gaccaccgcg gacgtgcatg ccttggcgca
     1741 gggcaaggcg gcctgacggg gcaacctcac gtcgtatcgc
//
LOCUS       DATAVD010001764         3272 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3518344, whole genome shotgun sequence.
ACCESSION   DATAVD010001764 DATAVD010000000
VERSION     DATAVD010001764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3272)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3272)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3272
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3518344"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2138
                     /locus_tag="VHX39_33735"
     CDS             <1..2138
                     /locus_tag="VHX39_33735"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HEX3996161.1"
                     /translation="PELGFVDAQNQVHVAQAPRHIDFHNRTGTSIRLSHAGAGIEITM
                     ARGRSLAVDISTRTLLRSGSATLDFGPPVTSAYGMTVTEWRDSHMPRVNGEKLGLEPA
                     ETARSAAVSPAGAVVGTDFFVRFVGRNGSGWKVSAGSPVWAVHASADGRVVVACLGDG
                     TIHWYDAADGRELVALFIDPATERFVVWTTAGYFDHDHRADGKPDGRTLIGYRMNEAS
                     GHSSEFVSIGQLYPTWFRPDLVGLSFRDDRTARRKMDEQQAHVAKVGDVLRDGLPPKV
                     TLLDACAVDSMTATGCNGARSVDLPLGRGANPAAVNAPVLLVRYKIDYQGNDPGRVVP
                     RLNEAVFNSGIKVESTAAHSRVEHALIPLARGLNVVNLSPVSGSGAIEAGSGASPEIR
                     LVRSVETQENDQAAAAPGAVPAPHGKMYVLTVGVSKLSNAAWDLANPANDAKALADLL
                     RQDKARLFGAVSVKTLTDADASKANIIDALKEIGGSATPDDVVVIFLAGHGRTVDGHY
                     YFAPSDMGSHDTTLMEQVNAAKADDAFDKAVDGVFRTEGLGQDDLLPLIQGMQATRIA
                     FLLDTCYSATLADANAVLRHDVNDTVTNRIGHASGRFVLSGSFTEAFDSGAGSDAKVG
                     EEGHGLFTSYLLRALQGDAGTDDTGRIDIYKLATFTQQHVQSASRRMLEQNAAKTGDK
                     APDVQQPAYYFAGNDFFAVRKLTAASVGK"
     gene            complement(2153..2824)
                     /locus_tag="VHX39_33740"
     CDS             complement(2153..2824)
                     /locus_tag="VHX39_33740"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEX3996162.1"
                     /translation="MILFAGDPHRNFSPVIRACLALPPATLLLVGDLDCQRPLRQEFA
                     AMMATGWNLRWILGNHDCETETAYDNLVGDHPEGDIGFRVTEVAGCRVAGLPGVFKPS
                     VWYPRLDDGAQRIEPPRFRNREAFLAAQPPSRWWRGGLPLWHRDSIFPDDVDRLANQR
                     FDILVAHEAPSCHRHGFSVIDDLAASGGAKLIVHGHHHDSYTATSRNGIAVRGLGLAE
                     TWLYR"
     gene            complement(2821..>3272)
                     /locus_tag="VHX39_33745"
     CDS             complement(2821..>3272)
                     /locus_tag="VHX39_33745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996163.1"
                     /translation="YVRRVLKYGDDKSYRPEMDDVDDKWDYSHQPPDTPGNAPPFDQT
                     ANVMPDLAHAMTTNPLLKVQINAGYFDLLTPYFEAKYEMRHLPIAQDLRNNIEYRCYQ
                     SGHMVYLMQEALTQLHDNVADFIERTDNLPAPAARKRSVTAGCASDQ"
BASE COUNT          630 a          944 c         1055 g          643 t
ORIGIN      
        1 agccggaact gggctttgtc gatgcgcaaa accaggttca tgtggcgcag gctccgcgac
       61 atatcgattt ccataaccgg acgggcacct cgatccggct gtcgcacgct ggcgccggca
      121 ttgaaatcac catggcgcgc ggcaggtcgt tggcggtcga catcagcacg cggacattgc
      181 tgcgttctgg cagtgccact ctggacttcg gacctcctgt caccagtgct tacggcatga
      241 cggtgaccga atggcgcgac agccatatgc caagggtgaa cggtgagaag ctggggttgg
      301 aaccggctga gaccgctcga tccgccgccg tttcccccgc gggtgcggtg gtaggcacgg
      361 acttctttgt gcggttcgtt ggcaggaacg ggtctggctg gaaggtttcg gccggctcac
      421 cggtttgggc tgtccatgcc agcgccgacg gaagggttgt tgtcgcttgc ctgggcgatg
      481 gcacgatcca ttggtacgat gctgccgacg gcagggaatt ggtcgcgctg ttcattgatc
      541 cggccaccga acggttcgtg gtatggacga cggccggata tttcgaccac gaccatcgcg
      601 cagacggcaa gcccgatgga cggaccttga tcggttaccg aatgaatgag gcatccggcc
      661 acagcagtga attcgtttca ataggtcaac tttatccgac ctggttccgg ccggacctcg
      721 tgggcctgtc gttccgcgac gaccgcaccg cacggcggaa gatggatgag cagcaggcgc
      781 acgttgccaa ggtaggcgat gtgctgcgcg acggattgcc gccaaaggtg acgttgttgg
      841 atgcctgtgc ggtggactcg atgacggcga ccggctgcaa cggtgcccgg tctgtcgatc
      901 tgcctctggg ccggggcgcc aacccggctg ccgtcaatgc gccggtcctc ctcgtccgct
      961 acaaaatcga ttatcaggga aacgatcctg ggcgggtcgt acctcgcctg aacgaggccg
     1021 tgttcaacag cgggatcaag gtcgagtcga cggccgcaca cagcagggtc gaacacgctt
     1081 tgatcccgct ggcgcgcggc ctgaacgtcg tcaacctgtc acccgtcagt ggctccggcg
     1141 cgatcgaggc cggcagtggt gccagtccgg aaattcgcct cgtgcggtcg gtggaaacgc
     1201 aggagaacga tcaggccgcc gctgcacctg gcgctgtgcc tgcgccgcac ggcaagatgt
     1261 atgtgttgac cgtgggggtc agcaagcttt cgaatgcagc gtgggatctg gcaaatccgg
     1321 cgaacgatgc caaggcactc gcggatttgt tacgccagga taaagctcgt ctgttcgggg
     1381 cggtgagtgt gaaaacgctg accgacgcgg atgccagcaa agcgaacatt atcgatgcgc
     1441 tcaaggaaat cggcggtagt gcgacacccg acgacgtcgt ggtgattttc ctcgccggcc
     1501 acggccgtac cgtcgacggg cattattatt tcgcacccag tgatatgggg agccacgata
     1561 cgacgctgat ggagcaggtg aatgcggcga aagctgacga cgcattcgac aaagcggtgg
     1621 atggcgtgtt ccggaccgag ggcctcggtc aggatgattt gctgccgctg attcagggca
     1681 tgcaggccac acgcatcgcg ttcctgttgg acacttgtta ttccgcgacg ctcgccgacg
     1741 ccaatgcggt gctccggcat gacgtcaatg acacggtgac caaccggatc ggccatgcct
     1801 cgggccggtt tgttttgtcc gggtcattta ccgaagcatt cgattccggt gccggttccg
     1861 atgcgaaggt cggcgaggag gggcacggac tgttcacttc gtatttgctg cgtgcgttgc
     1921 agggtgacgc ggggaccgac gacacaggac gcatcgacat ctacaagctg gcgactttca
     1981 cgcagcaaca tgtccagtct gccagtcggc gcatgctgga acagaacgcg gcaaagaccg
     2041 gcgacaaggc acccgatgtg cagcagccgg cgtattattt cgccgggaac gatttctttg
     2101 cggtgcgcaa gttgacggcg gcctcggtcg gaaagtaacg gtttcgacgc gcttagcgat
     2161 atagccaggt ctcagccaga ccaagcccgc gcactgcgat gccgttcctt gaagttgcgg
     2221 tgtaggagtc atggtgatgg ccatgcacga tcaactttgc gccgccgctc gcggcgaggt
     2281 cgtcgatcac tgaaaaaccg tggcgatgac aggacggcgc ctcgtgcgct accagaatat
     2341 cgaagcgctg attggcgagt cggtcgacat catcgggaaa gatcgagtcg cgatgccaca
     2401 gcggtaagcc gccccgccac catcgcgacg gtggctgcgc tgcgaggaac gcctcgcgat
     2461 tgcggaaccg cggcggttca atccgctgtg ccccgtcatc cagacgcgga taccagaccg
     2521 agggtttgaa cacgccgggc aaaccggcga cgcggcagcc tgccacttcc gtcactcgaa
     2581 aaccgatgtc accttcggga tgatccccga cgagattgtc gtacgccgtt tccgtttcgc
     2641 aatcgtgatt gcccagaatc catcgcaggt tccagccggt tgccatcatc gcagcgaatt
     2701 cctgccgcag cggtcgctgg cagtcgagat cgccgaccag caaaagagtc gccggcggaa
     2761 gggcgaggca ggcacggatc accggagaaa aattgcggtg tggatcgccg gcgaacagga
     2821 tcattggtca gacgcgcacc cggcggtcac ggatcgtttc cgggctgccg gcgccggcag
     2881 attgtccgtt cgctcgatga agtcggcgac gttgtcgtgc aattgcgtca gggcttcctg
     2941 catcagatac accatgtggc ccgactgata gcaccggtat tcgatattgt tgcgaagatc
     3001 ctgcgcaatc ggcagatgcc gcatttcgta tttggcttcg aagtacggcg tcagcaagtc
     3061 gaaatatcca gcattgatct gcaccttcag caacggattg gtggtcattg catgcgccag
     3121 atcgggcatg acatttgccg tctggtcgaa gggcggagcg ttccccggtg tgtccggggg
     3181 ttgatgcgaa tagtcccatt tatcgtcgac gtcgtccatc tcaggccggt acgacttatc
     3241 gtcgccgtac ttcaacacac gtcgcacata gt
//
LOCUS       DATAVD010001765         2256 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_914926, whole genome shotgun sequence.
ACCESSION   DATAVD010001765 DATAVD010000000
VERSION     DATAVD010001765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2256
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_914926"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1255)
                     /locus_tag="VHX39_33750"
     CDS             complement(<1..1255)
                     /locus_tag="VHX39_33750"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FG-GAP-like repeat-containing protein"
                     /protein_id="HEX3996164.1"
                     /translation="MSISFSSPVTYAAGANPVDVTTADLTGNSLPDIIVADDGNDTVG
                     NNGGVDILYNNGSGGFLPAVTYAAGTVPVGVLAVDLTGNGLQDLVVEDYGFTPTDGGV
                     DVLMSNGSGGFLPPASYATAPYPEGIVTADLNGDEEPDIIVGSASNYITVLMNNGSGG
                     FLPAVTYAVGSAPFGVATTDLTGNGLQDIIVADGGNGAAGTGGVDVLMNNGSGGFLPP
                     VSYAVGLFPGGVTTADLTGNGLQDIIVVDNGDGSPDSAGFEVLMNNGSGGFLPPVTYG
                     VSGAIGGTGTTADLTSNVVPDIVGTDWTDTLYIFANNGSGGFLAPVTYSAGATPTGVT
                     TADLTGDGKLDIIVSDFGDGSPGSAGVEVLTNLGSPLCFLAGTRIATPSGEVPVERLA
                     AGDRVLTLRGKARRVLWIGQGRVLAT"
     gene            1419..>2256
                     /locus_tag="VHX39_33755"
     CDS             1419..>2256
                     /locus_tag="VHX39_33755"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3996165.1"
                     /translation="MPDATSRVQRGLQHHRSGRLDEAERLYADALTENPRDADALHLL
                     GVLADARGARVRAVALIIEALKLRDAAQFHCNLSMVLGKLDRNEEAVAAASRALTLRS
                     DYPQALNNLGVALEALGRLEQAEAALRRALSAKPDYADAWSNLGNTLRRLDRPEEAIA
                     AYERAVVLNPAFPGAYANKAHLLREQGRLSEAEAAYRNEVAWHPDDPAAHTNLAAVLS
                     ESARSGDLEPESHNTLGNTLQRLGRFEEAEAACRRALALRPDYADAAINLGNVLREQG
                     RLK"
BASE COUNT          422 a          731 c          730 g          373 t
ORIGIN      
        1 gtgtcgccag cacccgcccc tggcctatcc agagaacgcg gcgcgccttg ccccgcagcg
       61 tcagcacccg gtcaccggcg gcaagccgtt cgaccggcac ctcgcccgac ggcgtggcga
      121 tccgcgtgcc ggcaaggaag caaaggggcg agccgagatt ggtcagcacc tccacaccag
      181 cgctgcccgg gctgccatcg ccgaagtctg agacgatgat atccaacttg ccgtcgcctg
      241 tgaggtctgc agtggtcacg ccggtggggg tggcgccggc ggaataggtg actggcgcga
      301 ggaaaccgcc gctgccgtta ttcgcaaaga tgtagagcgt gtcggtccag tcggtgccga
      361 cgatgtctgg cacgacgttt gacgtgaggt ccgcggtcgt gccggtgcct ccaatcgcac
      421 cggacacgcc ataggtgacc ggggggagaa acccaccgct gccattgttc atcagcactt
      481 cgaacccggc gctgtccgga ctgccatcgc cattgtcgac gacaatgatg tcctgcaggc
      541 cgttgccggt caggtcggcg gtggtgacgc cgccggggaa caacccgacg gcgtagctga
      601 ccggcggcag gaagccgccg ctaccgttgt tcatcaacac gtcgacgccg ccggtcccgg
      661 ctgcgccgtt tccgccgtcc gccacgatga tatcctgcag gccgttaccg gtcaggtcgg
      721 tggtggcgac accgaacggg gccgaaccca cggcgtaagt gaccgcgggg aggaagccac
      781 cactgccgtt gttcatcaac acagtaatat aattgcttgc acttccgacg atgatgtccg
      841 gttcttcatc gccgttcaga tccgccgtca cgatgccctc cggatagggc gcggtggcat
      901 agctggccgg cggcaggaag ccgccgctgc cgttgctcat tagtacgtcg acgccaccat
      961 ccgtcggggt gaagccataa tcctcgacga ccaggtcctg caggccattg ccggtcaggt
     1021 ccacggccag gacccctacc ggaaccgtcc cggcggcgta ggtgacagct ggcaggaagc
     1081 cgccactgcc attattgtac aggatatcga cgccgccgtt attgccgaca gtgtcattgc
     1141 cgtcatcggc aacgatgata tctggcaaac tgttgccagt taagtcagct gtcgtgacgt
     1201 caacaggatt ggctcccgcc gcgtaggtaa ccggtgaact gaacgagatg ctcatcagca
     1261 aaactcctca accgacaaca agtctgaggc ggaagattga aaccttacaa acgcgatgcg
     1321 ggtttggcaa agtctcgtgt ccgcggtgtg cggttcattt gcatccggac cgccgcgacc
     1381 ggccgccagg atgcgtgtag aagttgagga gcaatgcgat gccggacgct accagccggg
     1441 tgcagcgagg gctccagcat caccgttcgg gccgactcga cgaggccgag cgcctgtatg
     1501 ctgacgcgct gaccgagaac ccgcgcgacg ccgacgcact gcatctactc ggcgtgctgg
     1561 cggatgcacg cggcgcgcgg gtccgtgccg tcgcattgat catcgaagcg ctgaagctgc
     1621 gcgacgcggc gcagtttcat tgcaacctca gcatggtgct cggtaagctt gaccgcaacg
     1681 aggaggccgt ggcggcggca tcccgcgccc taacgctgcg atcggattat ccgcaggcat
     1741 tgaacaactt gggcgtcgct ctggaggccc ttggccgtct ggagcaggcc gaggccgcgt
     1801 tacggcgcgc cctcagcgct aaacccgact acgcggatgc gtggagcaat ctcggcaaca
     1861 ccttgcgccg gcttgaccgg ccggaagagg cgatcgccgc gtacgagcgc gccgtcgtac
     1921 tcaatcccgc cttccccggg gcatacgcaa acaaggcgca tctgctgcgc gagcagggtc
     1981 gcctgtcaga ggccgaggcc gcctatcgaa acgaggtcgc atggcatccg gacgatccgg
     2041 cggcgcacac aaacctcgcg gcagtgctga gcgagtccgc gcgatcaggc gatctggagc
     2101 cagaatcgca caacacgctc ggcaacacgt tgcagcggct cggtcggttc gaggaagccg
     2161 aggccgcctg tcggcgcgcg ctggcactgc gtcccgacta tgccgacgcg gcgatcaatc
     2221 ttggcaacgt gctacgcgaa caggggcgcc tgaaag
//
LOCUS       DATAVD010001766         4849 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1284539, whole genome shotgun sequence.
ACCESSION   DATAVD010001766 DATAVD010000000
VERSION     DATAVD010001766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4849
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1284539"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..1230)
                     /locus_tag="VHX39_33760"
     CDS             complement(43..1230)
                     /locus_tag="VHX39_33760"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEX3996166.1"
                     /translation="MAALDDCYNIFDMREAAKRRLPRGIFEFVDRATEDHLAVADNRA
                     GFQDIKLRHRALVDVSGRSTKTMLFGKEVSLPMIIAPTGAAGLCWYRGELQLAKAAAK
                     AGIPFAMSTASMTAMEEVATEAGGRLWFQLYVWKRRDLSYQVIERAKQAGYEALVVTV
                     DSAVSPNREYNARNGFSAPLKPNLRMAVDIALHPSWSLGVMGRYLRTTGMPKQENFPP
                     EFQESITRGVGDRADGMRRDSLTWDDVKTFREMWPGPLMLKGVNRVDDALKAINYGVD
                     GIIVSNHGGRNMDSAPATIRVLPEIAEAVGDKATVILDSGVRRGSDIVKALALGAKAV
                     LTGRATLYGTAVAGQAGAAKAIKVIQTEMDKTMAYTGCNRVDEISTDIFFGDREANRL
                     MAG"
     gene            complement(1262..1819)
                     /locus_tag="VHX39_33765"
     CDS             complement(1262..1819)
                     /locus_tag="VHX39_33765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996167.1"
                     /translation="MPDTPTFGRYAEIPLDQMTPEQQAGYHALVEARGALGGPNKIWV
                     HNPGLAKVMGPLGAYFRTGYSLSEREREIAVIIINRKWHSIYPTNAHERAGKAAGLPA
                     EKVEALLSGLPTSFDDKREQVIYEIATCLANSRWVAKGLWDRAVEALGHEGITDAICL
                     MGFYTSVSMTLACYDVPAGATGVTR"
     gene            2447..2788
                     /locus_tag="VHX39_33770"
     CDS             2447..2788
                     /locus_tag="VHX39_33770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996168.1"
                     /translation="MKPKALAFDSYFAAHPGAIDLWLGGHTHTYPADVINGRSHIEQK
                     WGVNFVNCAQLTKFHGTVTTPPMSRHFTFTEGSRLVRVRCYLHDDTYATPGWYPPAER
                     VLEFSRPFYRT"
     gene            3151..3393
                     /locus_tag="VHX39_33775"
     CDS             3151..3393
                     /locus_tag="VHX39_33775"
                     /inference="COORDINATES: protein motif:HMM:NF012759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEX3996169.1"
                     /translation="MGKDEITRRLQSVFHDVFDDDAIIVTENTTAPDVEGWDSIANIR
                     LMVSVEEAFRIRFDVGEYQEHRNVGDLIASIARRTA"
     gene            3400..>4849
                     /locus_tag="VHX39_33780"
     CDS             3400..>4849
                     /locus_tag="VHX39_33780"
                     /inference="COORDINATES: protein motif:HMM:TIGR01686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIC family phosphatase"
                     /protein_id="HEX3996170.1"
                     /translation="MEDPAALRWLPRSPQDFRARCAEVDKRPGRGDALRQLAGHALGV
                     NELQRLARSVDQALADGAAAPLQEFTLGLVSNTTTDFIAPALIGSAARHGMALRVAAA
                     TFGMTMQAALDLTSEPLASRPHAILLALDYRAYFADYAVEGDPEARVTAAIRQLQDLV
                     AAFSDASRAVLLVQTIAAPPERLFGSFDRGQPGTGAWLAAAFNQRLSSEVLRPGVSLL
                     DVEALANQVGLASWFDRSQYMTARLPFASRFVPIYAEHVARLIGAIRGRSRKVLVLDL
                     DNTLWHGVIGDDGIDGIHLGQGDPRGEAHQDLQRAALALKQRGILLAISSKNDEAVAR
                     QAIREHPEMLLREADFSAMQINWSDKATNLEVLADRLSLGIDSFVFLDDNPAERAQVR
                     ASLPEVLVPELPSDPAEYAAVLMASGAFEAVSFSEEDRQRAEQYAANARRDSLAAQSR
                     DLAGFLASLQMRIFFTADGDTGWSRFTQLINKS"
BASE COUNT          830 a         1501 c         1594 g          924 t
ORIGIN      
        1 ccatgcggtg cccgccgttt acctccttcc ggcgtccacc cattacccag ccatcagtcg
       61 gttggcttcc cgatcgccga agaatatgtc ggtggagatc tcatcgacgc ggttgcatcc
      121 cgtataggcc atggttttgt ccatctcggt ctggatgacc ttgatggcct tggctgctcc
      181 cgcctggccg gcgaccgcgg tcccgtacag cgttgcgcgt ccggtcaaca ccgccttggc
      241 accgagcgcc aacgccttga cgatatcgga gccccgacga acgccggaat cgaggatgac
      301 ggtggcctta tcgcccaccg cctcggcgat ttccggcagc acgcggatgg tcgcgggggc
      361 gctgtccatg ttgcggccgc cgtggttgga gacgatgatg ccgtcgacgc cataattgat
      421 cgccttcagc gcgtcgtcga cacggttgac gcctttgagc atcagcgggc ccggccacat
      481 ctcccgaaat gtcttcacgt cgtcccaggt cagggagtcc cggcgcatgc cgtcggcccg
      541 gtctccgacg ccgcgggtga tggattcctg gaactcgggc ggaaagttct cctgcttcgg
      601 catgcccgtg gtcctgaggt agcggcccat cacgcccagg ctccaggacg ggtggagggc
      661 gatgtcgacg gccatgcgga gattgggctt cagcggggcg gaaaagccgt tgcgggcgtt
      721 gtactcgcgg ttgggggaga cggcggagtc aaccgtcacg accagcgcct cgtagcctgc
      781 ttgtttcgcc cgttcgatca cctggtacga cagatcacgc cgcttccaga catagagctg
      841 gaaccatagg cggcccccgg cctctgtcgc gacttcttcc atcgcggtca tcgaggcggt
      901 ggacatcgcg aacggaatcc ccgccttcgc cgccgctttg gccagctgca gttcgccgcg
      961 gtaccagcac aggcccgcgg ccccggtcgg ggcgatgatc atcggcaggc tgacttcctt
     1021 gccgaacagc atcgttttgg tggagcggcc ggagacatcg accagcgctc ggtggcgcag
     1081 cttgatgtcc tggaagccgg ctcggttgtc ggcgaccgcg aggtggtctt cggtggcgcg
     1141 gtcgacgaac tcgaagatgc cacgcggcag gcggcgtttg gcggcttcgc gcatgtcgaa
     1201 gatgttgtag caatcgtcca gtgcggccat gttggtttcc ccccgggtcg agccgtgatc
     1261 ctcagcgcgt gacgcccgtc gcgccggcgg gcacgtcata acaggccagg gtcatcgaga
     1321 cactggtgta gaagcccatc aggcaaatgg catcggtgat gccctcgtgg ccaagcgcct
     1381 cgaccgcgcg gtcccagagc cccttggcga cccagcgcga attggccagg caggtggcga
     1441 tttcgtagat gacctgctcg cgcttgtcgt cgaacgaggt gggcaggccg gagagcagcg
     1501 cctcgacctt ttcagccggc agaccggcgg ctttgccggc gcgctcatgc gcgttggttg
     1561 gatagatcga atgccatttg cggttgatga tgatgacggc gatttcgcgc tcgcgctcgg
     1621 agagcgagta gccggtgcgg aaataagcgc cgagcgggcc catgactttc gcaaggccag
     1681 ggttgtgcac ccagatcttg ttcggcccgc caagcgcgcc gcgggcctcg accagcgcgt
     1741 gataacccgc ttgctgctcc ggggtcattt ggtcgagcgg gatttcggcg tagcggccga
     1801 aggttggggt gtcgggcatt gggagttcct cctgaggttt attgggggaa tagtctgcga
     1861 cgggggcggg tggctgtcga cctgacattt tgctccagtc gacccgacgc tcgtcgtcat
     1921 tgcgcgcacg acgataaacg cgcacgaata tcgacattaa tgacgggctc cgttgcagat
     1981 ttttcgggta gacccggacg tgctttgatc actgcccact ttcatgccgg gctctcgtga
     2041 cacgactgtt tgatgcatac cgccggggcc accgcagcca tagatctatt cacgcaacga
     2101 cgcgctcttc ccggctcgcc agcatgccca tcgcaaatcc ctcctggttc tcagcatggt
     2161 cgatcggacc cgatagcttg caccaaagta gccggggcaa agtcgccagc gcgatgcgtc
     2221 tggtcgcggt gcccgcgccg gcacgtggtg gcgcgggatc gtcgagcggg cccgggcgaa
     2281 caatgagatc atcatctcct gccaccatca catgctgcgg gagacaacgg tcggctcagg
     2341 agacttcgag ggtgtgatga agaatccgga cggcacgtgg cgtcgcggct tgtatcatgg
     2401 cgccgacggg cagcccgagg gagcgtccta gctttacttt ctcggcatga agccgaaggc
     2461 gctggcgttc gacagctatt tcgcggcgca tccgggtgcg atcgatctct ggctgggcgg
     2521 ccacacccac acttatccgg ctgatgtcat caacggccgt tcgcatatag agcaaaagtg
     2581 gggagtcaat ttcgttaact gtgcgcaatt gaccaaattc cacggcacgg tcaccacgcc
     2641 gccgatgagc cggcatttca cgttcacgga aggatccagg cttgtgcggg tgcggtgtta
     2701 cctgcacgac gacacctatg ccacgcccgg ctggtacccg ccggccgaac gcgtgcttga
     2761 gttctcgcga ccgttttacc gaacctgacg gaaggcgtgg cgaggctggt gcgcgctcgc
     2821 gcgccataac gaggacaagc cagcgcggcg gcctggaggc tacgcttttc gcgggctggc
     2881 gaatcgcgag cacgcacatc gtcggactga acgacagaat gggtcggagc gccgcgagga
     2941 gggctcacgc ggtggctccg cccggctggg gcgcagcgct ggtcctggca gccggaaggc
     3001 acgccggtcg ctcagccggc gtcccgcgcg acttgcgcag actctgccca cggcgatata
     3061 gaccgcccga ttctggggca cggtcgtccg cgtaccggcc cgtcctgcgc atcaatcggt
     3121 tcgcaaattc gcctggcgag gacagcctgt atgggaaaag acgaaatcac acggcggctg
     3181 cagagcgtgt ttcatgatgt gttcgacgac gatgcaatca tcgtcaccga gaacacgacc
     3241 gctccggatg tcgaagggtg ggacagtatt gccaacatac ggctcatggt ctccgttgag
     3301 gaagcattcc gtatccggtt cgacgttggc gagtaccagg aacatcggaa tgtcggcgac
     3361 ctgatcgcca gcatcgcccg tcgaaccgcc tgaattcaca tggaagatcc ggctgcgctg
     3421 cgctggctgc cacggtcgcc gcaagatttc cgggcacgtt gcgccgaggt ggacaaacgc
     3481 ccaggccgcg gcgacgcgct ccgccagttg gccgggcatg ctctgggtgt gaatgaactg
     3541 cagcgactgg cgcgctcggt tgaccaggcg ctggccgacg gtgccgcggc gccgctgcag
     3601 gagttcacac tggggctggt cagcaatacc accaccgatt tcatcgcgcc ggctttgatc
     3661 ggcagcgcgg cccgccatgg catggcactg cgggtggctg cagctacgtt cggcatgacc
     3721 atgcaggcgg cactggatct aacatcggaa ccgctggcca gccgaccgca tgcaattctt
     3781 ctggcgctcg actaccgagc ctatttcgcc gattacgcgg tggagggtga cccggaggct
     3841 cgggtgaccg cggcgatcag gcagttgcag gatctggtcg cggccttttc cgacgccagt
     3901 cgcgctgtgc ttctggtgca gaccatcgcc gcgccgcccg agcgcctgtt cggcagtttt
     3961 gaccgcggcc agccaggcac cggcgcctgg ctcgccgctg ccttcaatca gagactgagc
     4021 agtgaggtcc tgcgccccgg cgtgagcctg ctggatgtgg aggcgttggc gaaccaggtg
     4081 ggactggcgt catggttcga ccgcagccaa tacatgactg ccagattgcc cttcgcgagc
     4141 cgcttcgtgc cgatttatgc cgagcatgtg gcgcgactga tcggcgcgat acggggccgc
     4201 agccgcaagg tgttggtact ggatctggac aatacgctgt ggcatggcgt catcggtgac
     4261 gacggcatcg atggcattca cctcggccaa ggggatccgc ggggcgaggc acatcaggac
     4321 cttcagcgcg ccgccctggc tctgaaacaa cgcggcatac tgctcgccat ttcatcgaag
     4381 aacgacgagg ccgtggctcg gcaggccatt cgggagcatc ccgaaatgct gctgcgcgaa
     4441 gctgatttca gcgccatgca aatcaactgg tcggacaagg cgactaatct cgaggtgttg
     4501 gctgatcgcc tttctctggg gatcgatagt ttcgtgttcc tggacgacaa tccggcggag
     4561 cgagcccagg tgcgcgccag tctgcctgag gtgctggtgc cggaattgcc gagcgatccc
     4621 gctgaatacg ccgcggtgct tatggccagc ggtgcgttcg aggcggtaag cttctcggag
     4681 gaagatcgtc agcgcgcaga gcagtatgcc gccaatgccc gcagggacag cctcgcggca
     4741 caatcacgcg atctggcggg ttttctcgca tcgctacaga tgcgcatttt ctttaccgct
     4801 gatggcgata ccggctggtc gcgttttacc caactgatca acaagtcca
//
LOCUS       DATAVD010001767         4250 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3327580, whole genome shotgun sequence.
ACCESSION   DATAVD010001767 DATAVD010000000
VERSION     DATAVD010001767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4250
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3327580"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(177..938)
                     /gene="istB"
                     /locus_tag="VHX39_33785"
     CDS             complement(177..938)
                     /gene="istB"
                     /locus_tag="VHX39_33785"
                     /inference="COORDINATES: protein motif:HMM:NF013828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HEX3996171.1"
                     /translation="MAELQDQSIRQHCKALRIPTIGTQFARLAEAASREGQSHLGYLE
                     ALLAAEMEERESRAITRLLHEARLPRMKTLEAFEFDRSGVSAGQLRTLADGDYVTRAE
                     PILLVGEAGTGKTHLATGLCVAACRQRRRVRFTTATALINELAEAAHANQLSRALGRW
                     ERLDLICIDELGYVPLAETACELMFQVIADRAEKAAVIVTTNLPFSEWSQVIPNPRLC
                     KALIDRLTDQAHIITTGTDSYRFRPTTAQRKAIKP"
     gene            complement(938..2461)
                     /gene="istA"
                     /locus_tag="VHX39_33790"
     CDS             complement(938..2461)
                     /gene="istA"
                     /locus_tag="VHX39_33790"
                     /inference="COORDINATES: protein motif:HMM:NF033546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HEX3996172.1"
                     /translation="MDLFEQLRREHEFGIGTIAGVAAKFGVHRRLVRQAIASALPPKH
                     HYPPRAKPKLGVVAAFIDQVLDEDRHAPRKQRHTARRLYHRILTEFPDATVAESTVRN
                     HVRERKQQMGLLRRETFVPQSYAWAQEAQVDWYEAWIDLGDERTKVQVFAMRSMASGA
                     AFHRAYLHATQQAFLEAHEHAFAYFGGVFHLLRYDNLASAVRKILRGYRREETVRFMA
                     FRSHWRFAAEFCTPGEGHEKGGIEGESGYYRRNHLVPVPRVADLDALNTMLLTACRAD
                     EARILDGRNETIGAAMAFERGHLLACAAEGLDLAEIVFPLVDKQGCVTVKTNFYSVPV
                     RAGTRVEARVHPLHVEIWHAGRLVARHERCHSRRQHVLDLEHYLEVLSHKPGAFAGSK
                     PLAQWRAAGRWPACYDELWDRLRTRHGKQNGTRAMVAVLALGQEFGHERLRTAIVATV
                     TLGACDVAAVRYLLTEASLAKARPEPIDVGALARYDRPLPDLADYDTLLSGPCAGTA"
     gene            complement(2823..3872)
                     /gene="nrfD"
                     /locus_tag="VHX39_33795"
     CDS             complement(2823..3872)
                     /gene="nrfD"
                     /locus_tag="VHX39_33795"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEX3996173.1"
                     /translation="MPDDVTFDRPEDPSDVRQNPQASIGGKGPWRGPTYYGRSQLKPA
                     PFGKLAVGGYIFLAGLSGATALISALLDASNGEAAAAPVRRGRYLSLLAPTIGAGLLV
                     WDLHTPKRFYNMLRIAKSTSPMSIGVWILMGFSAFAGVSAVSQFLSDRVPGLRWLRGA
                     ARFTQMPAAIAGTGLATYTASLLSATSTPLWAAAPQVLAVRFGSSSVAAGASALSMGE
                     PSPRLRRKLDSLTVAALATELAAIMGSQQTYECKGVADALDGSWGQVEKWGATRLGVI
                     APLAIHGLSLLMSRRRDANALGRPLPVALSVAASLATLAGSLTLRVSILGAGNESAMR
                     PDISFRFSESQPASE"
     gene            complement(3880..>4250)
                     /locus_tag="VHX39_33800"
     CDS             complement(3880..>4250)
                     /locus_tag="VHX39_33800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX3996174.1"
                     /translation="CTLCYDRLKGGLEPACAKSCPTDSIQFGELHDLQQRAQERVESL
                     HAVGVESAYLYGVPGAPGATGGLGHLNAFFLLTERPETYNLPAAPTRASNRVGPSLLS
                     GLATVAGLALGAIALFSRRD"
BASE COUNT          781 a         1434 c         1315 g          720 t
ORIGIN      
        1 tcctcgtcgc cacgccataa ccgcctccaa acaatgccgg agcccttcga atagctgtga
       61 caatgaatat tggcccactt gtgctgacga atattggccc accccccggt gtttgatctg
      121 ttgagccggg ccgaggccgg gctcaacaga tcagcggcgc cgcgtgggtc ctcctgtcat
      181 ggtttgatgg cctttcgttg agccgttgtc ggacggaagc ggtaggagtc ggtgccggtc
      241 gtgatgatgt gcgcctggtc ggtcagccga tcgatcagcg ccttgcacag ccgcggattt
      301 ggaatcacct gcgaccattc cgagaacggc agattggtag tcacgatgac tgccgctttc
      361 tccgcccggt cggcaatgac ctggaacatc aactcgcagg cagtttcggc aagaggaacg
      421 tagcccaatt cgtctataca gatcaggtcg agccgctccc atcggcccag tgcgcggctg
      481 agttgattgg cgtgcgctgc ctcggccagt tcgttgatca gcgccgtcgc cgtggtgaac
      541 cgcacccgcc gccgctggcg acaggcggcg acacatagtc ccgtcgccag atgcgtcttt
      601 cccgtaccgg cctcgccgac caacaggatc ggttcagccc tggtcacgta gtcgccatca
      661 gccagcgtgc gcagttgtcc ggccgagacg cccgaccggt cgaactcgaa cgcctccagc
      721 gtcttcattc gcggcaatcg cgcctcgtgc agcagccggg tgatcgctcg gctctcgcgt
      781 tcctccatct cggccgccag cagcgcttcg agatagccga gatgggattg gccctcgcgg
      841 ctggctgctt ccgccagacg agcgaactgc gtgccgatcg tcggtatccg cagcgccttg
      901 cagtgctggc ggatggactg gtcctgaagc tcggccatca tgcggtcccc gcgcagggac
      961 ccgacaacag cgtgtcgtag tcagcaagat ccggcagcgg tcggtcatag cgagccaacg
     1021 cgccgacatc gatcggctcg ggcctggcct tggccagcga cgcctcggtc agcagatacc
     1081 gcaccgccgc cacgtcgcag gcgcccagcg tcacggtcgc gacgatcgcg gtgcgcagcc
     1141 gctcatggcc gaactcctga cccagcgcca gcaccgccac catggcgcgg gtgccgttct
     1201 gcttgccatg ccgtgtccgc aaccgatccc acagctcgtc gtagcaggca ggccaacgac
     1261 cggccgcacg ccattgcgcc agcggtttcg acccagcgaa tgcccccggc ttgtggctca
     1321 gcacctcgag gtaatgctcc agatcaagca catgctggcg gcggctgtga cagcgttcgt
     1381 ggcgggcaac caagcggccc gcatgccaga tctcgacatg cagcggatgg acacgcgctt
     1441 ccacccgggt gcccgcgcga accggtaccg agtagaagtt ggtcttcacc gtgacgcagc
     1501 cttgtttgtc caccagcggg aacacgatct cggccaggtc gagcccctcg gcggcacacg
     1561 ccagcagatg accacgctcg aacgccatcg ccgcgccgat cgtctcgttg cgtccatcca
     1621 ggatccgcgc ctcgtccgca cggcaggccg tcagcagcat ggtgttgagc gcatcaagat
     1681 cggcgacgcg cggcaccggc accagatggt tgcgccggta ataaccgctt tccccttcaa
     1741 tgccgccctt ctcatggcct tcacctggcg tacagaactc agcggcgaac cgccaatgcg
     1801 agcggaacgc catgaaccgc accgtctcct cccgtcgata gccgcgcagg atcttgcgca
     1861 ccgcactggc caggttgtcg tagcgcaaca gatggaaaac gccgccgaaa taggcgaagg
     1921 cgtgctcgtg cgcttcgagg aacgcctgct gcgtcgcgtg caggtaggcc cggtggaacg
     1981 ctgccccgct ggccatcgag cgcatcgcga agacctgaac cttggtgcgc tcgtcgccga
     2041 gatcgatcca ggcttcatac caatcgacct gcgcctcctg cgcccaagcg taactttgcg
     2101 gcacgaacgt ctcgcgccgc agcaagccca tctgctgttt gcgctcgcgc acgtggttgc
     2161 gcaccgtcga ttcagcgacc gtggcgtcgg gaaactcggt caggatccgg tggtagagcc
     2221 gccgcgccgt gtgacgctgc ttgcgcggcg cgtggcgatc ctcgtccagc acctggtcga
     2281 tgaaggccgc aaccacgccg agcttcggtt tggccctcgg tgggtagtgg tgcttcggcg
     2341 gcagcgcact ggcaatcgct tggcgcacca accgccggtg aacgccgaac ttcgcggcga
     2401 cacccgcgat cgtgccaatc ccaaactcat gctcccgacg aagctgctcg aacaaatcca
     2461 ctttggctct ccagtccacg ccaagccccc cgatccaatc gggagaccgt aggttgaggg
     2521 accggaggtg ggccaaaatc catcagcact actggaccaa aattcgctag cagagccaaa
     2581 ggatctccag gagcggctgg gaacgctcaa cgatgccgtc gtggccgtta cgttagcaaa
     2641 gtcgcttgtt cagagcggcc agtcagaccg aattccagct gtgtgcgcct tgtctggctg
     2701 gagccaaaag cggctgcgca aggtgaagcg caggctacct gccgcctggg ccgaatttcg
     2761 ggatgctccg ccgttctggg catgaaggcc tggcaatttg tatcgcaatt tcgtgcctta
     2821 tttcactcgg aggcgggctg agattccgag aaccggaagc tgatatccgg ccgcatagca
     2881 gattcattgc ctgcgccaag gattgacacc cgcagcgtca ggctgcctgc caacgtcgcc
     2941 agcgatgccg ccactgacag agccacgggc aacggccgac ctagcgcgtt cgcatcgcgc
     3001 cgccgagaca tcagaagaga cagaccatgg atagccaggg gcgcgatgac gccaagtctg
     3061 gtggcgcccc acttctcgac ctgcccccaa gacccgtcca acgcatcggc cacgcctttg
     3121 cactcatagg tctgttgcga ccccatgatt gccgcaagtt ccgtcgccag ggccgcgacg
     3181 gtcagactat ccagttttcg tcgaagccga ggagacggct cgcccatcga cagggccgag
     3241 gcgcccgccg cgactgagga tgagccgaac cgcaccgcca ggacctgggg cgccgcggcc
     3301 cataatgggg tgctggtggc cgacagcaga gacgccgtgt aggtggccag ccccgtcccg
     3361 gcgatcgccg ccggcatctg cgtgaaccgc gccgcgccgc gcagccagcg cagccccggc
     3421 acccggtccg acaggaactg actaacagcg ctgacaccgg caaaggcgga gaagcccatc
     3481 aggatccaaa cgccgatcga catcggcgat gtcgacttgg cgatacgcag catgttgtag
     3541 aagcgcttcg gcgtgtgcag gtcccagacg agcagacctg caccgatggt gggcgccagc
     3601 agtgacaaat accgcccgcg tcgtacgggt gcggcggcgg cctcgccgtt gctggcatcc
     3661 agcaaggccg agatcagtgc tgtcgcaccc gacaggccgg ccaggaagat gtatccaccg
     3721 actgctaact tcccaaacgg cgccggcttt agttgcgaac gaccataata cgtcggtccc
     3781 cgccacgggc ctttgccacc gatcgacgcc tgcgggttct ggcggacatc ggatggatcc
     3841 tcagggcgat caaatgtgac gtcgtcgggc atggcggctt caatcccgtc gtgagaacaa
     3901 ggcgatcgca cccaatgcca ggccggcgac cgtggccagc cccgataaga ggctgggacc
     3961 cacgcggttc gatgcgcgcg tcggcgcggc cggaaggttg taggtctcgg gccgttccgt
     4021 cagcagaaag aacgcattca ggtgacccag gccgcccgtc gcgcccggcg cgccaggtac
     4081 gccatacagg taggcgcttt cgacacccac agcatgcaag gactccacgc gctcctgcgc
     4141 acgttgttgc aggtcgtgca gttcgccgaa ctggattgag tccgtcgggc aggattttgc
     4201 acaggcgggt tcgaggccac ccttcagccg gtcgtaacac agcgtgcatt
//
LOCUS       DATAVD010001768         3538 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_914998, whole genome shotgun sequence.
ACCESSION   DATAVD010001768 DATAVD010000000
VERSION     DATAVD010001768.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3538
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_914998"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..348)
                     /locus_tag="VHX39_33805"
     CDS             complement(<1..348)
                     /locus_tag="VHX39_33805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996175.1"
                     /translation="MKRLLAMLAAAAVMVVAVGPAFAAHSDFDGIWSPEERGIGGPPG
                     RGPGGPGPGANGAGPQGGAPGRPPGAPRGGFQRLMPPYKPEWAAKYQALLDSSRDGKV
                     LVDPTARCLPPGMP"
     gene            complement(403..3219)
                     /locus_tag="VHX39_33810"
     CDS             complement(403..3219)
                     /locus_tag="VHX39_33810"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEX3996176.1"
                     /translation="MKIVTALCGGVSLLVLASAAQAQNVTASADQSPEVVVVTGSRVI
                     VNGYAAPTPLTVVPAEQLQQLAPSTIPDALNKLPVFDGSTVAQTGANGSAVAGNYLNL
                     RDFGVNRTLILMNGLRMAPTNFNGQVDVNSIPEMLLQRVDVVTGGASAVYGSDGVTGV
                     VNFIMDTNFNGVKADAEVGDSEHGDSGSVRYGIAAGGDIYNLGHVEVSYEHFQEGGLL
                     SYQRSFDALRTVYSGTGSAANPYTLTNRAGLAKTAFGGYVLTGPFAGQQFLSSGQLGS
                     YTSGAPTGTATLVSGGDAAYYNDEPLTVPQNENQVYGRFDHDFGSDLTAYLQFSDTWS
                     HQGENASNWPQQTSTFFSGNPFLPSTAQSALTAAHAASFTAAIFPRDLALLSHQNDYS
                     AANSITAGVNGRIFGDYNWQASYTHGTAEFHQQLSNNINTANYLAAIDAVSGPNGPEC
                     YVSTTASASLYPGCAPLDVFGAGNESTAAENFIFQPTQWKADNGFDDFNGSITGSPFS
                     DWAGPVTAALSAEYRLQSLVETTSANPLAPTSFTGLRDVPVPPPGSNYAYATVAPTHA
                     ANNVWEVAGETLIPLAKDMTFAKSLEVDAAARYTDYSTSGTVWTWKAGLDYQPLDDIR
                     FRATESRDIRAPTLYDMFAGQSSLVQNLSDPHTGVSRVVSIVTKGDPNLVPEVSQTTT
                     AGVILSPSWLPDFRMSVDYYDITMNNAITSLAGNNATLLAQCEAVQWQSSLCSTLIVR
                     PLPFGNTTAANFPTTVYSESFNIAKNWTNGVDVEASYNLELADVAQELPGNLGLRLLY
                     NYQPTLKAINFPGAVTTNAAGAAGLASSRLNVMANYNVGRFRLGWTTRYYSPEQRSGT
                     PGQYFANPELPSYTISDLTLNYTMLVDNHTADLFFNVQNLFDVQPQIAPNIVFSGIPG
                     FGNPAVAGDDLIGRYFTVGLRLRY"
     gene            complement(3317..>3538)
                     /locus_tag="VHX39_33815"
     CDS             complement(3317..>3538)
                     /locus_tag="VHX39_33815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996177.1"
                     /translation="PGGKFSQTGPEEGYPKGRLERYDYMSADGKPMFSWIWVVDMPHG
                     QAVGEAQLEWNFFKSWRRNSDGSLTYTSL"
BASE COUNT          695 a         1053 c         1079 g          711 t
ORIGIN      
        1 cggcataccg ggcggcagac agcgcgcggt gggatcgacc aacaccttgc cgtcacggct
       61 gctatccaac aacgcctggt acttggccgc ccactcgggt ttgtacgggg gcatgagacg
      121 ttgaaatccg ccgcgcggtg ctccaggcgg acggcccggc gcgccgcctt gcggtccggc
      181 gccgttggcg cccggccccg gcccaccggg accacgccct ggcggcccgc cgatcccgcg
      241 ctcttcaggc gaccagatgc cgtcgaaatc cgaatgcgcc gcaaaagctg gaccgaccgc
      301 cacaaccatc accgcggccg ccgccaacat cgccaataag cgcttcatca catcctccac
      361 atattgcccc ggcgaaacgg ttcgacgcgc cggcaccgtc gatcaatatc gaagcctgag
      421 accaaccgtg aagtagcggc cgatcagatc gtcacccgcc acggctggat tgccgaagcc
      481 cggtataccc gagaagacga tattcggcgc gatctgcggc tgaacatcga acaggttttg
      541 cacattgaag aagagatcag cggtatggtt atccacgagc atggtgtaat tcaatgtcaa
      601 gtcgctgatc gtgtaggacg gcagctccgg attggcgaaa tattgccctg gtgtgcccga
      661 ccgctgctcc gggctgtaat agcgcgtcgt ccagcctaac cggaaccgtc cgacattata
      721 gttggccatc acgttcagcc tgctggacgc caatcccgcc gcgccagccg cattggtcgt
      781 gaccgctccg gggaaattaa tagctttcaa cgtcggctga tagttgtaga gcaaccgaag
      841 gcctaggttt ccgggcagtt cctgcgcaac atcggccagc tcgaggttgt aactcgcctc
      901 cacgtccacg ccatttgtcc agtttttggc gatattaaaa ctttcgctgt agacagtggt
      961 cgggaaattg gccgcagtcg tgttgccgaa gggaagtggc cggacgatca gcgtcgagca
     1021 gagagatgat tgccattgca cggcctcgca ctgcgccaga agcgtcgcgt tgttgcctgc
     1081 cagactggtg atcgcattgt tcatcgtgat gtcgtaataa tccaccgaca tgcggaaatc
     1141 cggcagccaa gacggcgaca ggatcacacc agcggtcgtt gtctgcgaca cttcgggcac
     1201 aagattcgga tcgcccttgg taacgatgct gaccacccgg ctgacgcctg tatgcgggtc
     1261 gcttagattt tggacgagcg agctctgccc tgcaaacatg tcataaagtg tgggtgcacg
     1321 gatgtcgcgg gattcggtgg cgcggaagcg gatatcatca agcggctggt aatccagccc
     1381 agccttccat gtccagaccg tgccgctggt gctgtagtcc gtgtagcggg ccgcggcatc
     1441 gacctcaagc gacttggcga aggtcatgtc cttggccagc gggatcaagg tttcgccggc
     1501 gacttcccat acgttgttgg cagcatgggt gggtgcgacg gtggcatagg catagttcga
     1561 accgggcggc ggcaccggca cgtcacgcag acccgtgaag ctggtcggag ccagcggatt
     1621 ggcggaagtg gtttccacaa ggctctgcag ccgatactcc gcgctcaagg cagccgtcac
     1681 tggtcccgcc caatcgctga agggcgagcc ggtgatgctg ccgttgaaat cgtcgaagcc
     1741 gttatccgcc ttccactgcg tgggctggaa gatgaagttc tcggccgcag tggattcgtt
     1801 gccggcgccg aacacatcga gcggcgcgca tccgggataa agagaagccg atgccgtcgt
     1861 gctgacataa cactcaggac cgttcggacc ggagacagcg tcaatcgccg ccaggtagtt
     1921 ggccgtgttg atgttgttgc tgagctgctg gtggaattcg gccgtgccgt gtgtgtagct
     1981 cgcctgccag ttatagtcgc cgaagatacg gccgttcacg cccgcggtga tactgttggc
     2041 agcggaatag tcgttctggt gagaaagtaa cgcgagatcg cgtgggaata tcgccgcggt
     2101 gaagcttgcg gcgtgggctg ccgtcagcgc cgactgagcc gtagacggca ggaatggatt
     2161 gccgctaaaa aacgtcgacg tctgctgcgg ccaattcgac gcgttctctc cctgatgcga
     2221 ccaggtgtcg gagaattgca gataggcggt gaggtcggaa ccgaagtcat ggtcgaaccg
     2281 gccatagacc tggttctcgt tctgcgggac ggtcaggggc tcatcgttgt agtaggccgc
     2341 gtcgcctccg gaaacgagcg tggccgtgcc ggtgggcgct cccgaggtgt aactaccgag
     2401 ttggccgctg gagagaaact gctggccagc gaatggacct gtcagcacat aaccgccgaa
     2461 cgctgttttc gcgagaccag cacggttggt caaggtgtag gggttcgcgg cgctgcccgt
     2521 gccagaatag actgtccgaa gggcatcgaa gctgcgttgg taactgagca gcccaccttc
     2581 ctggaaatgc tcgtagctga cttcgacatg gcccagatta tagatgtcgc caccggcggc
     2641 gatgccgtag cgcaccgagc cggaatcgcc atgctcggaa tcgcccactt ccgcatcggc
     2701 cttcacgccg ttgaagttgg tatccatgat gaaattgacc acgccggtca cgccgtcaga
     2761 accatacacc gcagaggcgc cgcccgtgac cacgtccacc cgttgcaaaa gcatctcagg
     2821 aatggagttc acgtccacct gaccattgaa gttggtcggc gccatcctca ggccgttcat
     2881 caggatcaga gttcggttaa cgccgaagtc acgtaggttc aagtagttgc ccgcaacggc
     2941 gctaccgttt gcgccggtct gcgccacagt cgagccgtcg aagacgggta acttgttgag
     3001 ggcgtctgga atggtgctgg gagcaagctg ctgaagctgc tcggccggca ccacagtaag
     3061 cggtgtgggc gccgcatatc cgttgacgat gacacgtgag ccggtcacta cgacaacttc
     3121 cggcgactgg tccgcggacg ccgtgacgtt ctgcgcctga gctgctgacg cgagcaccaa
     3181 caggcttact cctccgcaaa gtgcggtaac tattttcatt gtttcctccc ccgagatttt
     3241 ttaattggtt cgttgtttct ttattgctcc ttcatcggca cgcgcaccgc tctttcaaga
     3301 ttttcgccac gcctcgtcag agcgacgtgt aggtaagtga gccgtcggaa ttacgccgcc
     3361 atgatttgaa gaaattccat tcgagctgag cctcgcccac agcctggcca tgaggcatgt
     3421 cgaccaccca gatccagctg aacatcggct tgccgtccgc gctcatatag tcgtagcgct
     3481 cgagccgtcc ctttggataa ccctcctcag ggcccgtttg gctgaacttg cctccggg
//
LOCUS       DATAVD010001769         1835 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_352793, whole genome shotgun sequence.
ACCESSION   DATAVD010001769 DATAVD010000000
VERSION     DATAVD010001769.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352793"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="VHX39_33820"
     CDS             complement(<1..346)
                     /locus_tag="VHX39_33820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996178.1"
                     /translation="MMTIDSQVHCYEHDHPGRPWVSVLTGPPHVTGDEMVAAMDAVGV
                     DGALLVSPFAMYRYDASYAITCYAAHPTRYRLIKPVDPNDPAVSETIAEWAAIKGTVG
                     VRIMMRDGVSTDP"
     gene            605..880
                     /locus_tag="VHX39_33825"
     CDS             605..880
                     /locus_tag="VHX39_33825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018981189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantetheine-binding protein"
                     /protein_id="HEX3996179.1"
                     /translation="MSGRTTQAEQEAALAGLIVRTLNLDMKASEIDPEAALFGEGLGL
                     DSIDVLEIALAISQNYGVQLRSDDEQNAAIFQSLRSLNQHIQARRSS"
     gene            881..1540
                     /locus_tag="VHX39_33830"
     CDS             881..1540
                     /locus_tag="VHX39_33830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996180.1"
                     /translation="MGAVAAPLRKAAVVLALIMAPIGIHVAMATQRGLAAAGVLVIAE
                     SGLIAWIALSFVPIRSLRWIGCAAVLVLTTAIWLLAPDGIVASSAIPHAVAYLSLLIV
                     FASSLMPGRKPIITVLAEASRGILLPAVKVYTRRVTWAWCLFCAGQLGISLVLSLFAP
                     VTVWSAFVNLCNLPLLAAMFCGEFAWRTWRHGSWPQERLTDGFRLARQVRSGSTHDTL
                     R"
     gene            1595..>1835
                     /locus_tag="VHX39_33835"
     CDS             1595..>1835
                     /locus_tag="VHX39_33835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-ligase"
                     /protein_id="HEX3996181.1"
                     /translation="MSGYPLLRMHRPEATFAWRDGNPTSAARFLHDVAALADQLPAHR
                     HVVNLCADRYDFTVGFAAALCRQQTNLLPPHDAPEL"
BASE COUNT          311 a          563 c          585 g          376 t
ORIGIN      
        1 cggggtcggt cgacactccg tctcgcatca tgatgcggac gccgacggta cccttgatcg
       61 cggcccactc agcaattgtt tcagacacgg cagggtcgtt cgggtcaacc ggcttgatca
      121 ggcggtaccg tgtcggatgc gccgcgtaac acgtgatggc gtagctggcg tcgtaacgat
      181 acatcgcgaa cggggaaacc aacagcgcgc catcgacacc gaccgcgtcc atcgcagcga
      241 ccatctcatc gccggtgacg tgcggcgggc cggtcaggac actgacccag gggcggcccg
      301 gatggtcatg ttcgtagcaa tgaacctggg aatcgattgt catcatgatg tccgccctcc
      361 tcgccgccgg tcgcggatcc cttgaccgag aaccggtgca ccgccaacaa ccccggcctg
      421 gaacgatccg ccctgtttcg acttcatgcg agggtgggac cgtcttgtcc agggcctgcc
      481 tggcagccca caaagccgga gtagtgatcg gcgcgtcgct ggtgtagtca ggcaatcggt
      541 tgggggcgaa atgacacctg gcgctcccgg atccatggtc tgagacaaca agcgggatga
      601 acgaatgtca ggcaggacca cgcaggcgga gcaggaagcg gcgttggcgg ggcttatcgt
      661 caggacgctc aacctcgata tgaaagcgtc ggagatcgac ccggaagccg ctttgttcgg
      721 cgagggtttg ggcctggact cgatcgacgt gctggaaatc gccttggcga tctcacagaa
      781 ctacggcgtg cagttgcgct cggatgatga gcagaacgcc gcgatctttc agtcgctgcg
      841 tagcctgaac caacatatcc aggctcgtcg gtccagctga atgggtgctg ttgccgcacc
      901 gctccgtaaa gcagcggtcg ttctggcgct gatcatggcg ccgatcggca ttcatgttgc
      961 gatggcaacg caacgcggcc tggctgcggc tggcgtgctg gtgatcgcag aatccgggct
     1021 gatcgcctgg attgcgctat cgttcgtacc gatccgcagc ctgcgatgga tcggatgcgc
     1081 tgcggtgctg gtgctgacca cagcaatctg gctgctggct ccggacggga tcgtcgcgtc
     1141 gtcggccatc ccgcacgcgg tcgcctatct gtcgttgctg atcgtgttcg ccagctcgct
     1201 gatgccggga cgcaaaccaa tcattactgt gctcgccgag gcatcccgtg gcatcctact
     1261 gcccgccgtc aaagtctata cgcgccgcgt tacctgggcc tggtgcctgt tttgcgcggg
     1321 acaattgggg atctcgctgg tgctatcgct gttcgcgccg gtcacggtgt ggtcggcctt
     1381 cgtcaatctg tgcaatttgc cgttgctcgc ggccatgttc tgcggtgagt tcgcctggcg
     1441 cacatggcgt catggcagtt ggccgcagga acgcctgacc gacggatttc gtttggcccg
     1501 ccaggttcgc tcgggctcga cccatgacac gcttcggtaa caaccggtcc ccgggcatgt
     1561 cgccgccaca ttgcatccgt tttggtcgag ttcgatgagc ggatatccgc tgcttcgcat
     1621 gcatcggccg gaggcaacgt tcgcctggcg tgacggcaat ccgaccagcg cggcaaggtt
     1681 tttgcacgat gtcgccgctt tggcagacca gctgccagcg caccgccacg tggtcaacct
     1741 gtgcgctgat cgttacgact ttacggtcgg gttcgcggct gcattgtgtc gtcagcaaac
     1801 caatcttctg ccgccacacg atgcgccgga actgc
//
LOCUS       DATAVD010001770         3201 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2029648, whole genome shotgun sequence.
ACCESSION   DATAVD010001770 DATAVD010000000
VERSION     DATAVD010001770.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3201
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2029648"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            93..1733
                     /locus_tag="VHX39_33840"
     CDS             93..1733
                     /locus_tag="VHX39_33840"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3996182.1"
                     /translation="MDTQASVTGNVETKIGTSFDAVVIGAGVAGLYQLYKLRQLGLKV
                     LALEAGSAVGGTWYWNRYPGARFDSESHTYGYSFSQELLDEWHWTERFAPQTETERYL
                     NHVADKFDLRGDIQFNSRVASARYHDDRRSWELTLEDGRRYDTRFLVSAIGILSSPTM
                     PNIPGIETFKGVSCHTHAWPRDGVDFAGKRVGIIGTGATAVQTIQELAKTVGHLTVFQ
                     RTPNWCAPLHNGKISEAEMRDIRAQYQEIFALCRTSPGCYIHAPDPRRTLDVPPEERE
                     AFWDNLYASPGFGIWMGNFSDMLTDRAANAAASDFIARKIRQRVHDPVVAEKLIPKNH
                     GFGTRRVPLETRYYEAYNQPNVELVDINDTPIERITSAGIKTSDRAYDFDIIIYATGF
                     DAITGAFDRIDIRGSNGVRLKDLWKDGPQTYLGVLVEGFPNMLMAMGPHAGLGNYTRT
                     AEYSVEWVTGLIRFATERGLTRIEATAEGVAEWTEYVLELGQGQLMNEVASWMTGVNR
                     NVEGRQKARIMRYSGGHPAYREHCDAVAADGYRKLALA"
     gene            1884..>3201
                     /locus_tag="VHX39_33845"
     CDS             1884..>3201
                     /locus_tag="VHX39_33845"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3996183.1"
                     /translation="MAKQLHLGAIMRPVGIHTAWWRFPGAYPDANFNLTHLVRFIRTL
                     EQARFDAFFMAYHLAVLNMPVQALRRSATATSFEPLTLLSALAMVTERIGLIATASTT
                     FDEPYHIARRFASLDHISHGRAGWNVVTTANPDAALNFGLTEHVEHDERYQRAREFQA
                     VVTGLWDSWADDAWQYDQASGIVFDPEKMHVLNHHGPHLSVRGPLNIARPIQGWPVIV
                     QAGASDAGRQLAAETAEVVFGSSRTIEEARSFYNDMKTRVTAAGRVADHLKILPGALV
                     IVGRTSAEAQAKKALLDSLVHPESGVPNLSIRLGVDASGFDLDAPLPEIPQSNQSQSG
                     RDTIVALARRENLTVRQLAQLVGGFGGLQMIGTASEIADTMQSWLETGACDGFNIMFP
                     TVPAGLDDFVALVIPELQSRGIFRNEYAGTTLRDHLGLPRPRNQFFP"
BASE COUNT          630 a          955 c          981 g          635 t
ORIGIN      
        1 gaacgcatcc tccgatttgg ccagagttga tgcacgcagc acttaacggg taggtttgcg
       61 gtagctgttc tgaaagctga ggagaaaagc ggatggatac ccaggcctcg gtcacaggga
      121 atgtggaaac caaaataggg acgtctttcg atgccgtcgt gattggtgcg ggcgtggctg
      181 gactgtatca gctctacaaa ctacgccagc tcggcctgaa ggttctggca ctcgaagcgg
      241 ggtcggcggt cggtggaacc tggtattgga accgctatcc gggcgcgcgc ttcgattccg
      301 aaagccacac ctatggctac tcgttttcgc aggagcttct tgacgaatgg cattggaccg
      361 agcggttcgc cccccagact gaaaccgagc gctatctcaa ccatgtcgcc gacaaattcg
      421 acctgcgggg tgacatccag ttcaacagcc gcgtcgcgtc ggcgcgttac cacgacgatc
      481 gtcgcagctg ggaactcacg ctggaagatg gccgccgcta cgacacgcgc tttctggtga
      541 gtgccatcgg tatattgtcg tcaccgacga tgccgaacat tccgggcatc gaaaccttca
      601 agggcgtgtc ttgccatacg catgcctggc ccagggacgg ggtagacttc gccggcaagc
      661 gcgtcgggat catcggcacc ggcgccacgg ccgtgcagac gatccaggaa ctcgccaaga
      721 cagtcgggca tctgactgtg tttcagcgca cgccgaactg gtgcgcgccc ttgcacaacg
      781 gcaagatttc cgaggcggag atgcgtgaca tccgggcgca ataccaggag attttcgcgc
      841 tctgccgcac ctcacccggt tgctacatcc atgcgccgga cccgcgtaga acgcttgacg
      901 tgccgcccga ggaacgcgag gcgttctggg ataacctgta tgcctcaccg ggtttcggca
      961 tctggatggg caatttcagc gacatgctga ccgaccgggc ggcgaatgcg gcggcttccg
     1021 atttcatcgc gcgcaagatc aggcaacgcg tccacgatcc ggtcgtcgcc gaaaagctga
     1081 ttccgaagaa ccacggattt ggcacgcggc gcgtgccgct cgaaacccgc tactacgagg
     1141 cctacaacca gcccaatgtc gaattggtcg acatcaacga cacgccgatc gagcgcatca
     1201 catcggccgg tatcaaaacg agcgaccgtg cctacgactt cgacatcatt atctatgcga
     1261 cggggtttga tgcgatcacc ggcgccttcg accgcatcga catacgcggc agtaacggcg
     1321 tgcggctgaa ggatctctgg aaagatgggc cgcagaccta tctcggcgtg ctggttgaag
     1381 gctttccgaa catgctgatg gcgatgggcc cgcacgccgg cctaggcaac tacacgcgaa
     1441 cggccgagta cagcgtcgaa tgggtcaccg gtttgatccg gttcgcgacc gagcgcggcc
     1501 tgacccgcat cgaagcgacg gccgaaggcg ttgccgaatg gaccgaatac gtcctggagc
     1561 ttggccaggg tcagttgatg aatgaagtcg cgtcatggat gacgggcgtc aatcgcaatg
     1621 tcgagggcag gcagaaagcg cggatcatgc gctacagcgg cggccatcct gcttaccgcg
     1681 agcactgcga tgccgttgcg gcggatggct accgaaaatt agccttggcc taattgttgg
     1741 gtgaatggcg tccgtcgccg ggtgcggtga tgaccttcag cgggtccgtt tcggtacgcg
     1801 aaatattccc ggcgccattg cttgttctac ggttcgttcg caggcttttt tccagcgcaa
     1861 ctttgacgaa ctgagtaatc aacatggcaa agcagcttca tcttggtgcc atcatgcgtc
     1921 cggtcggcat ccacacggcc tggtggcgct ttccgggtgc ttatcctgac gccaacttca
     1981 acttgacgca cctcgtgcgg ttcatccgga cccttgagca ggcgcggttc gatgcgttct
     2041 tcatggcgta ccacctggct gtgttgaaca tgccggtcca ggcgctacgc cgcagtgcga
     2101 ctgcaacttc gttcgagcct ctgacgctgc tttcggcttt agcgatggtg actgagcgga
     2161 tcggcttgat cgcgaccgca tcgacaacct tcgacgaacc gtaccatatc gcgcgcagat
     2221 tcgcctcgct cgatcacatc agtcatggcc gcgcggggtg gaatgtggtc acgacggcca
     2281 atcccgatgc tgctctcaat ttcggactga ccgaacatgt cgagcacgac gaacgttacc
     2341 agcgggcgcg tgagttccag gcggttgtga ccggcctgtg ggacagctgg gcagacgatg
     2401 cgtggcaata cgaccaggcg agcggcatcg tctttgaccc cgagaaaatg catgtcctca
     2461 accaccatgg tccgcatcta tccgtgcgtg gaccgctgaa cattgcgcgg ccgatccagg
     2521 gctggccggt cattgtccag gctggtgcat ccgatgccgg caggcaactc gccgccgaga
     2581 ccgcggaggt cgtgttcggg agcagccgga caatcgagga ggcccgaagt ttctacaacg
     2641 acatgaagac gcgcgtgacc gcggccggac gtgtcgccga tcacttgaaa atcctacccg
     2701 gcgctctggt gattgtcgga cggaccagcg cggaagcgca ggcgaagaaa gccttgctcg
     2761 acagtctcgt gcatcccgaa agcggcgttc ctaacctgtc catccggctg ggtgtcgacg
     2821 cttcgggctt tgatctcgat gcacccttac ctgagatccc ccagagcaat cagagccaga
     2881 gcgggcgcga tacgatcgtt gcccttgcgc gccgggagaa tttgactgtc cgccaactgg
     2941 cccagcttgt cggtggcttt ggcgggctgc agatgatcgg gacagccagt gaaatcgcgg
     3001 acacgatgca gtcctggctg gagaccggtg cctgcgacgg gttcaacatc atgtttccga
     3061 cggtgcccgc cggccttgac gatttcgtgg cacttgtcat tccggagctg caaagccgcg
     3121 gcatctttcg taacgaatat gcggggacca ctttgcgtga ccatctcggt ttgcctcggc
     3181 cgcgcaacca attctttccc g
//
LOCUS       DATAVD010001771         1797 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2774252, whole genome shotgun sequence.
ACCESSION   DATAVD010001771 DATAVD010000000
VERSION     DATAVD010001771.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2774252"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..489
                     /locus_tag="VHX39_33850"
     CDS             <1..489
                     /locus_tag="VHX39_33850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996184.1"
                     /translation="LLQALFALDDPTAVAEKFRQFGQLDQNSDAVRLFVALEDWLNDG
                     VPLSATTARECMRSWYRDNLPGRGEWRVSGLAIDPASIQVPAFVAVPRRDHIVPPDSA
                     RALARLLPKVTLVEPNAGHVGMTAGRSAAKVLWEPLRDWLRTIDVERSRRPPMRRASK
                     RA"
     gene            643..>1797
                     /locus_tag="VHX39_33855"
     CDS             643..>1797
                     /locus_tag="VHX39_33855"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HEX3996185.1"
                     /translation="MNDIVIVSAVRTPVGSFNGALSTLSAQSLGAIALRAAFARAGVE
                     AGDVDEVIFGQVLAAAGGQNPTRQAARSAGLPDAKTAFGINQVCGSGLRAVALGAQQI
                     RTGESAIVTAGGMESMSLSTHAAHLRNGTKMGGLEFVDTMLKDGLWDAFHGYHMGNTA
                     ENVATKFQITREQQDAFALASQQKASAARKAGRFRDEIEPVTVKARKGDIVVADDEYI
                     RDDASMETMARLRPAFTKDGTVTAGNASGINDGAAALVLMSAQEAQKRGLTPLARIAS
                     FATAGVDPAVMGTGPIPATRKALQRAGWKVDDLDLIEANEAFAAQAIAVNKDLGWDTA
                     KVNVNGGAIAIGHPIGASGARVLVTLLHEMTKRDAKKGLATLCIGGGMGVA"
BASE COUNT          315 a          529 c          620 g          333 t
ORIGIN      
        1 ctgttgcagg cattgttcgc gctggacgat ccgactgcgg tcgctgagaa attccgccag
       61 ttcgggcaac tcgatcagaa cagcgacgca gtccgcctgt ttgttgcgct ggaggactgg
      121 ctgaacgacg gcgtcccgct gtccgccacc accgccaggg aatgcatgcg aagctggtac
      181 cgcgacaacc tgccaggccg cggggagtgg cgtgtctccg gactggcaat cgatcccgca
      241 tcgatccagg tgccggcgtt tgtggcagtg cctcggcggg accatatcgt gccacctgac
      301 tctgcgcgtg cgctggcgcg cttgttgcca aaagtcacgc tggtggagcc gaatgccggc
      361 catgtcggga tgactgccgg gcgctcggcg gcaaaggtcc tgtgggagcc tctgcgggac
      421 tggttgcgaa ccattgatgt tgaacggtca cggcggccac ccatgcggcg tgcgagtaag
      481 cgtgcctgac gccgctgaca aattggccgt tcgtgcatat gtcatcgggt ggctgccgcg
      541 catgcctgat gcgacccgtt cgcccctgtc ttcctgccca ggcatggcgc ggctacaact
      601 caagttctgg cggaataatc cgcccttcgg gagtgtgaca gcatgaacga catcgtcatc
      661 gtctccgcgg ttcgtacccc ggttggcagt ttcaacggcg cgcttagcac gctttccgca
      721 caatctttgg gcgcgatcgc cttgcgcgct gcctttgccc gcgcgggggt cgaagccggc
      781 gacgtggatg aggtgatttt cggtcaggtg ctcgcggcgg ccggcgggca gaacccgacc
      841 cgtcaggcgg cacgctctgc cggtctgccg gatgccaaga ctgccttcgg catcaaccag
      901 gtctgcggct ccggtttgcg cgcggttgcg ctgggtgcgc aacagattcg caccggcgag
      961 agcgccattg tgaccgccgg tgggatggag agcatgagcc tgtcgaccca cgccgcgcat
     1021 ttgcgcaatg gcaccaaaat gggcggcctg gaatttgtcg ataccatgct caaggacggg
     1081 ttgtgggacg ccttccatgg ctaccacatg ggcaacacgg cggagaacgt tgccaccaaa
     1141 tttcagatta cgcgtgagca gcaggacgca tttgctctgg cgtcgcaaca gaaagcatcg
     1201 gccgcgcgca aggccggccg tttcagagac gaaattgaac cggtgacggt aaaggcccgc
     1261 aaaggcgaca tcgtcgttgc agatgatgaa tatatccgcg acgatgcgtc gatggagacg
     1321 atggcgcggc tgcggcctgc cttcaccaag gacggcacgg tgaccgcagg caatgcgtcg
     1381 gggatcaatg acggtgcggc ggctttggtg ctgatgagcg cgcaggaggc gcagaagcgc
     1441 ggcctgactc cactcgcccg gattgcctct tttgccactg ccggggtcga tcctgcggtg
     1501 atgggtaccg ggccgatccc ggcaacgcgg aaggcattgc agcgcgccgg ctggaaggtt
     1561 gacgacctgg atttgatcga ggccaacgag gcgtttgcgg cccaggcgat tgcggtgaac
     1621 aaagatctgg gttgggacac ggcgaaggtg aacgtcaatg gcggggcgat tgcgatcggc
     1681 catccgatcg gcgcctcggg tgcgcgggtg ctggtcacct tgctgcacga aatgacgaag
     1741 cgggacgcga agaagggcct tgccactctg tgcatcggcg gcggcatggg tgtcgcg
//
LOCUS       DATAVD010001772         2192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2029901, whole genome shotgun sequence.
ACCESSION   DATAVD010001772 DATAVD010000000
VERSION     DATAVD010001772.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2029901"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1147)
                     /locus_tag="VHX39_33860"
     CDS             complement(<1..1147)
                     /locus_tag="VHX39_33860"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEX3996186.1"
                     /translation="MSAHTGLASLFTDRKIRTKVSLGFVCVLAILASVSGMAYIAFQS
                     AAEGFTTYAQRVAVADIAQDTDTGFLNLRRTARNYALTSDEANVTEMNRDEAKLHGVL
                     VRGLNEIRNPDRHRRLQEVSDLTDRYIADFNKVVANTRQEAEVQKNYLLPLGLAQRQY
                     FAALIAAGSAGDNNLMTLAYKGLDQWMLMRLAASRAVFQHDKAAAVEVEKMFVAFDET
                     LQGLDTATKGADSRPLFENLQKGLPAYRDAYHRFIALQADVNGLIDGTMQQIATQVQT
                     NTEAIRTSAAAEQTQAETATLATMDRTGRSVLTLTIGGVLLGGAIAWLIGRGIAGPVI
                     GLSSAMTALAGGDITITVPGIARGDEIGTMAKAVDVFKRNMVEMDRLR"
     gene            complement(1551..>2192)
                     /locus_tag="VHX39_33865"
     CDS             complement(1551..>2192)
                     /locus_tag="VHX39_33865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996187.1"
                     /translation="AASASGTEFIRAPGFPYAGPQHASGVLVWVPGTYGKDQTGPPPP
                     PDFVGREAAAGMDVVCFNRERNDDPLDGGSQTLAHEILVLRESGYHRVVVAGHSRGAW
                     LALTVLAYPGLADAIVAFDPAAHGTRAEHMAKAMADWTALWESAVNSDTHVVLVQLAD
                     DPWDPDPARRLAIAQARLGARLLSIFQPAEPKGHAGVYDPAFDPLFGARIAAW"
BASE COUNT          406 a          681 c          693 g          412 t
ORIGIN      
        1 cgcgcagccg atccatctcc accatgttgc gtttgaagac gtccaccgct ttggccatgg
       61 tgccgatttc atcgccccgc gcgataccgg gaaccgtgat cgtaatgtca ccgccggcca
      121 gtgcggtcat tgcgctggag agaccaatca ccggacctgc aatgccgcgg ccgatcagcc
      181 aggcaatcgc accgccaagc agcacgccgc cgatcgtcag ggtcaatacc gaccgaccgg
      241 tgcgatccat tgtcgccagc gtggcggtct cggcctgggt ttgctcggcg gcggcactgg
      301 ttcggattgc ctcggtattg gtctgaacct gggtggctat ctgctgcatc gtaccgtcga
      361 tcaggccgtt gacgtcagcc tgcagggcaa tgaagcgatg ataggcatcg cgataggccg
      421 gcaggccctt ctgcagattt tcaaacaacg ggcgggagtc ggcgcccttg gtcgccgtat
      481 cgagcccctg cagcgtctcg tcgaaggcaa cgaacatctt ctcgacttcg acggcagcgg
      541 ccttatcatg ttgaaagacc gcgcgagagg cggcgagccg catcagcatc cattgatcca
      601 ggcccttgta ggccagcgtc atcaggttgt tgtcgccggc acttccggcg gcaatcagcg
      661 cggcgaaata ttgcctctgg gccagaccca atggcagcag atagtttttc tgcacctcgg
      721 cttcctgacg ggtattcgcc acgaccttgt tgaagtcagc gatgtaacgg tccgtcagat
      781 cggaaacctc ctgcagacgg cggtgccgat cagggttccg gatctcgttg agcccgcgta
      841 ccagcacccc gtgcaacttc gcttcgtcgc ggttcatctc agtgacgttg gcttcgtctg
      901 aggtcagcgc gtaattgcgg gcggtgcggc gcaagttcag aaagccggta tcggtgtcct
      961 gggcgatatc ggcgaccgcc acccgctgcg cataggtggt gaagccttct gccgcagatt
     1021 ggaatgcgat gtaagccatg ccggagacgg atgcgaggat cgccagcacg cacacgaagc
     1081 cgagactcac tttggtacgg atcttgcggt ctgtgaacag tgaagcaagg ccggtgtgtg
     1141 cactcatgaa cgggatcctt gattgcgggt cacgataacc ggcagcagaa gtgccgatcg
     1201 tttgttggtt tcaggtgggc catatcgagg aacggagcgc gtcgatccgg acggtggcag
     1261 atttgcacgc caacggttaa aattgcctga acggcacccg aagtattacc gatcgtaacg
     1321 aaccggtggc gctgcgggcc ggcgcgagcc ataccaaccg aatgaggtca gccgtatcga
     1381 atggtcaggc gattctggtg gcgcgtcctg gcaacagccg gctcaatgat gcctccagca
     1441 ggcgccgtgt ttccgtcgag caattgctgg aattggctgc gacggatgtg tccttcgatg
     1501 tcgtcggcca ggacaccggc gcggacatca ggcgtgctct gacggccgtc tcaccaggct
     1561 gcgatccgcg cgccgaacaa tgggtcgaac gccgggtcgt agactccggc atggcctttc
     1621 ggctccgccg gctgaaagat cgacagcagc ctggcgccaa gccgcgcctg cgcaatggcc
     1681 aaccggcgag ccggatctgg gtcccacgga tcgtccgcca attgcaccag cacgacatgg
     1741 gtgtcgctgt tgaccgcgga ttcccacaac gcggtccagt ctgccatcgc cttcgccatg
     1801 tgttccgctc gggtgccgtg cgccgcaggg tcgaacgcca ctatcgcgtc ggcgaggccg
     1861 ggatacgcca gcaccgtcaa cgcaagccag gcgccgcgcg agtgaccggc caccaccacg
     1921 cgatggtacc cgctttcccg caacacgaga atttcgtgcg ccagagtttg actgccgcca
     1981 tcgagcggat cgtcgttacg ttcgcgattg aagcacacga cgtccatccc ggcggccgct
     2041 tctctgccga cgaaatccgg cggtggcggc ggaccggttt ggtccttgcc ataggtgccg
     2101 ggaacccaaa ccaaaacgcc gctcgcgtgc tgcggaccgg cgtaagggaa gcccggcgcg
     2161 cgaatgaatt ccgtgccgga ggcggacgct gc
//
LOCUS       DATAVD010001773         1933 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2961677, whole genome shotgun sequence.
ACCESSION   DATAVD010001773 DATAVD010000000
VERSION     DATAVD010001773.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1933
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2961677"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            234..1415
                     /locus_tag="VHX39_33870"
     CDS             234..1415
                     /locus_tag="VHX39_33870"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3996188.1"
                     /translation="MRRRHLWSALAALAVGLSWAAMPAVAAEQRGVTDTEIVIGTITD
                     LSGVTAVQGVNNSDAIRMAFDEANDKGGVHGRKIKYIVEDNQYTVPRSVQAMNKLLNS
                     DNIFIALSDGGTPMNDADMPAEFEKGVPNVLPLTAARSMYEPFNKLKFAQFASYYDQM
                     RAAVKYFAEKRGRKKFCVMYQDSDFGKDVLAGVVAQTKAMGMEVAGTTAHRPTDTDFN
                     APVAKLKDANCDTIMLGTIVRDTNIIIQTIRKLNWDVDIVGQFASYDTAVASLPGGAT
                     EGSFCMTPALYAYPDDPRPAVQDFAKRFQAKFGRAPNFHGEVGYTAASIVLLALDRAG
                     RDLTTDGFIKAMESIHDYKDMFGSVLSFGPDQHHASTSSFLTVVKNGRWVPVEETALS
                     Y"
     gene            complement(1459..>1933)
                     /locus_tag="VHX39_33875"
     CDS             complement(1459..>1933)
                     /locus_tag="VHX39_33875"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEX3996189.1"
                     /translation="FLVIRDPAIKAAAAVFYAKAWEVVGARYRASDPPAGTSRERFDR
                     MLAAAEYLKDHLHEAPVWIVPCLAGARGSGGSIFPAVQNMLLACRALGLGTTLTTVYL
                     AHAAEAEAAMGIPEGYSSYAILPVGYPMGNFGPVRRAPLADVVYLDKWGTPFGGT"
BASE COUNT          411 a          615 c          566 g          341 t
ORIGIN      
        1 catctggaac gggtgattac cgatatcctc aaggacgcag cctgaccccc atcacggggg
       61 gccaacgaca gaagaagcga attcgtcgct caatatgtat ccggcgcgag cgacgagggt
      121 ggttcccttc ggacccaccg cacaccggat acaaccactc cgcgcgggcc tcgcccgcat
      181 tgacgtaacg aagcggccgc aatcatgcgg accgtgaagg gaaggaattg cttatgcgta
      241 gacgacacct ttggagcgcg ctcgccgcgt tagcggttgg cctgtcatgg gctgcgatgc
      301 cggccgtcgc ggctgaacaa cgcggcgtca ccgacacgga aatcgtgatc ggcaccatca
      361 ccgacctgtc gggcgtgact gccgtgcagg gcgtcaacaa tagtgacgcc atccgcatgg
      421 cgttcgacga agccaatgat aaaggcggcg tgcacggccg caaaatcaaa tacatcgttg
      481 aggacaacca gtacaccgtg ccgcgttccg tccaggcgat gaacaagctg cttaacagcg
      541 acaacatctt cattgcgttg tcggatggcg gcacgccgat gaatgacgcg gacatgccgg
      601 cggagttcga gaagggtgtg ccgaacgtgc tgccgctgac cgccgcccgg tcgatgtacg
      661 agccgttcaa caagctcaaa ttcgctcagt tcgcgtcgta ttatgatcag atgcgcgcgg
      721 cggtgaaata ttttgccgag aagcgcggtc gcaagaagtt ctgcgtgatg tatcaggact
      781 ctgacttcgg taaggacgtg ctcgccggcg tggtcgcgca gaccaaggcg atgggcatgg
      841 aagtcgccgg cacgacggcg catcgcccga ccgatacgga cttcaacgcg ccggtcgcca
      901 agctgaagga cgccaactgc gacaccatca tgcttggcac gattgtgcgc gacaccaaca
      961 tcatcattca gaccattcgc aaactgaact gggacgtcga tatcgtaggt cagttcgcgt
     1021 cctatgacac tgcggtggcc tctctgcccg gtggcgccac ggaaggatcg ttctgcatga
     1081 cgccggcgct gtacgcctat cccgacgatc cacgtcccgc ggtgcaagac ttcgccaaac
     1141 ggtttcaggc aaaatttggc cgtgcgccga atttccatgg cgaggttggc tataccgccg
     1201 cgtcgatcgt tctactggcg ctggatcgcg ccggccgcga cctgacgacg gacggtttta
     1261 tcaaagcaat ggagagtatc cacgactaca aagacatgtt cggcagcgtg ctgtcgtttg
     1321 gtccggatca gcatcatgcg tccaccagct cgttcctaac ggtcgtcaag aacggccgct
     1381 gggtgccggt ggaagaaacg gcgctgagct actgatcagc cttttgcgta aatcgcgtca
     1441 tcccggcggg tgacgcgatt acgtcccgcc gaacggcgta ccccatttat ccaaatatac
     1501 gacatccgcc agcggcgccc gccgcaccgg tccgaagttc cccatcgggt aaccgaccgg
     1561 caaaatggcg taggaactgt acccctccgg tatacccatc gccgcctcgg cttcggccgc
     1621 gtgcgccagg taaaccgtcg tcagagtcgt ccccagcccc aaagcccggc acgccagcag
     1681 catgttctgc accgccggaa atatcgagcc tcccgacccg cgcgcgccag cgagacaggg
     1741 cacgatccac accggtgcct catggagatg atctttgaga tactccgccg ctgcgagcat
     1801 gcgatcgaac cgctcccgtg acgtaccggc cggcggatcg ctggcacggt aacgcgcgcc
     1861 cacaacctcc cacgccttgg cataaaacac cgcagccgcc gccttaattg ccggatcgcg
     1921 gatcaccagg aac
//
LOCUS       DATAVD010001774         4954 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_172488, whole genome shotgun sequence.
ACCESSION   DATAVD010001774 DATAVD010000000
VERSION     DATAVD010001774.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4954
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172488"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            555..2009
                     /locus_tag="VHX39_33880"
     CDS             555..2009
                     /locus_tag="VHX39_33880"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEX3996190.1"
                     /translation="MALLRAPWHNVGFGRQNPLTSVRGQMSRRTAIASGAIALAAACA
                     LTGCGTDPDPDAVSVLARHANTELGNLIGGTPGLTVSGERLHVGLLGRFYARHGFEPV
                     WATRQAQVKSLVNAVLRAGDQGLDPGLFHADLLRKRATLPSLDRELLLSDAFLSYADA
                     LARGAVPVERRGDDETLTPKPINVAAALDAAIDSPDPAAVIEALAPNTPTYRALRLAL
                     MKYRSAAPAGGKATTDRLRKIEVNLERQRWLPRPLPADRAWVNVADERLVLYRADRPV
                     FSTRVVVGEDVKRNQSPEFRAVIDASFYNPPWVIPSDIATREILPKISHDPDYLTRNK
                     MVILANGEVEQLPGPDAGLGLIMFDMPNRFDVYLHDTPDKYIFSRDNRRISHGCIRVQ
                     DPREFAALLMRQPIDTINQGIAAGNTTRNNLPVPVPVFVVYQTAFVKTDGTLQFCPDF
                     YHRDAEIWQQLQRGPRGRGPAVQANNRPTSFAPV"
     gene            complement(2302..3942)
                     /gene="rmuC"
                     /locus_tag="VHX39_33885"
     CDS             complement(2302..3942)
                     /gene="rmuC"
                     /locus_tag="VHX39_33885"
                     /inference="COORDINATES: protein motif:HMM:NF014680.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEX3996191.1"
                     /translation="MTVEALTILAVVMALAALLGGIAGGWIGGRRKAGDAQALQNLST
                     LVDQSGKATREGIEALRGALADAERVLNAKIEDGLRGGFDRFLASIETFRGDITAVSQ
                     AMTRLGTEVPAVLETAGAKAKAEAADASRVLLTGLTAGLHQLSIEQATKTDAFGTKME
                     ASGAGVTKALAAFQAALTEGLGHVRDTVTRIGGDMTTTLAENQGKVSKALTDDFIKLT
                     AHVDTKIGEMREGNEAKLLEIQGVVDQKLQEGIEKRMTENFAKITAQFAEVQQAVGEV
                     KTVAGQVGDLKKLFSNVKSRGGWGEAQVKATLDDILPPNAYETNKCVNPATADTVEFA
                     LKLPVQGGSPVYLAVDAKFPVEDYTRLLEAVDAADPLAEKNARMALETRIRQEARKIQ
                     SKYIAPPYTVEWAILYLPSEGIYAEVTRNGGLLEAIHRDHRVVIMGPSMLAVMLRTIQ
                     LGHYTLAISQKAEVIGQILGAVKHEMVDFGNQFRLLEKNVQALGNNIKKGRTRAGVIT
                     RKLQGVAALEGPAAAEVLELPEEADDLGTEDEAELGNS"
     gene            complement(3996..>4954)
                     /locus_tag="VHX39_33890"
     CDS             complement(3996..>4954)
                     /locus_tag="VHX39_33890"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEX3996192.1"
                     /translation="LELSGPGLYEVPARRSNPNEVVLTSFGDRRDRTRFAAAYNDPDS
                     GITTGPRAPHTPVCVGPLTYTGHAAIKADIDNFKSALTAAGIEEGFMTSVAPGSASRI
                     GNLHYKTDDEFLFACADAMREEYKAIIDAGLILQLDDPSIAENWDMINPEPTVEAYRA
                     FSMRRVEALNHAIKGLPTDRIRFHLCWGSWHGPHTTDIPMRDIIDVMLAINAGAYSFE
                     AGNVRHEHEWSVWRDVKLPDGKLILPGVVSHATNVVEHPDLVAERITRFANLVGRERV
                     IAATDCGLGGRVHPDIAWAKLAALAQGAERASRAPWGRPKAA"
BASE COUNT          822 a         1591 c         1583 g          958 t
ORIGIN      
        1 gtaggctggc tggcgtaggc tggccggggc taccaaacct gggccagaac acccgcgcgg
       61 ttccctgact gctgggcagc ccagtgctga gcccatgcac aaacccgcga tcgaggcctg
      121 tctcgcagtc ccgccgcgcc agcccaacca ccccggcgcg gcctctcgct tttgggcgaa
      181 gagtgccgtt ccgatggcgg tcagatattg ggccaacgat gcgggatcgg gtcctcgggc
      241 cttaccgagc cccgtcgact agccccgtgc tggcggaacc ggaactggag ccggggcagg
      301 aggcggcggg gcggctacga ccggcgccgg cggcggcggc ggtgccggct gggaacacgc
      361 cgcaagcagc gccaaaggaa ccacgacggc aatcattgcc gcattgcgca accgcctgcg
      421 gcgggccact gtctcggaaa cggcggacat ccgatcctcc aaaattgcat tactcatgga
      481 cacggaaaaa atttaacggc aattcttggt taagagtcaa actgccaatt gcgtgagttg
      541 gcaacggtcg aggagtggca ctactgcgtg cgccgtggca caacgtcggc tttggccgcc
      601 aaaatccgtt gacgtccgtt cggggtcaaa tgtcgcgacg caccgcaatt gcaagcggcg
      661 cgatcgctct ggccgcagcg tgtgcactga ctgggtgcgg cacggatccg gaccccgatg
      721 cggtgtccgt gttggcacga catgccaata ctgaactcgg gaatctgatc ggcggcacgc
      781 ctgggctaac cgtctccggt gaacggctgc atgtcggctt gttggggcgc ttctacgcgc
      841 gccacggctt cgagccagta tgggcgaccc ggcaagcgca agtgaagtca ctggtgaatg
      901 ccgtgttgcg tgccggcgat caaggtctcg acccggggtt gtttcacgcc gacctgctgc
      961 gaaaaagagc gacattgccg tcgcttgatc gcgaattgtt gctgtcggac gccttcctat
     1021 cgtatgccga cgcgctggcc cgtggcgccg tgccggttga gcggcgagga gatgacgaga
     1081 ctttgacgcc taagccgatc aatgtggctg ccgcgctcga tgctgctatc gacagccctg
     1141 atccggcggc ggtgatcgag gcgctggcgc cgaacacgcc gacctaccgg gcgctgcgcc
     1201 tggccttgat gaagtatcgt tcggctgccc cggccggcgg caaggccacg acggaccgct
     1261 tgcgcaagat cgaggtgaac cttgaacgcc aacgctggct gccgcgcccg ctgccggcgg
     1321 accgcgcctg ggtcaatgtt gccgacgaac gactggtgct gtatcgcgcc gatcggccgg
     1381 ttttctcgac ccgggtggtt gtcggcgaag atgtcaagcg caatcagagt ccagagtttc
     1441 gcgcggtgat cgacgcaagt ttttacaacc ctccatgggt cattcccagc gacatcgcca
     1501 cgcgggagat cctgccgaag atcagtcacg accccgacta tttgacgcgc aacaagatgg
     1561 ttatcctggc aaacggcgag gtggagcaat tgccgggacc cgacgcaggg ctcggactga
     1621 tcatgttcga catgccgaac cggttcgacg tttacctgca cgatacgccg gataaataca
     1681 tcttcagccg cgataaccgt cgcatcagcc atggatgcat ccgggtgcag gatccacgcg
     1741 aatttgccgc cttgctgatg cggcaaccga tcgacacgat caatcaaggg atcgcggcgg
     1801 gcaacaccac ccgaaacaat ctgcccgtac ccgtgccggt attcgtggtc taccagaccg
     1861 cgttcgtaaa gaccgacgga acgttgcaat tttgcccgga tttctaccac cgcgacgccg
     1921 agatctggca acagttgcag agaggccctc gagggcgagg tcccgcggtg caggcgaata
     1981 atcgcccgac atcgttcgcg cccgtctaat accaaccggc gttgatgcag actcttcggt
     2041 tgaccccatc cgtcatgccg gctgaccccg tccgtcatgc cggctgaccc cgtccgtcat
     2101 gtcggttgac cccgtccgtc atgccggcgc atgccggtat ccacgccttt tacgagcgga
     2161 aacaaaggca tggaaggcga gcctgcgctc gccatggcgg ttgcacggcg gtaccgatgg
     2221 gtcaacatca agggcgattg gtataactgc tttgggccga acgcagcccg ccgttcaatc
     2281 agtcaggtcc ggtgtgcgga gttacgaatt cccaagctcc gcttcgtctt ccgtgcccag
     2341 gtcgtccgcc tcctccggca gttccagcac ctcggccgcc gccggacctt ccagggcggc
     2401 gacgccctgc agcttccgag tgatgacgcc cgcgcgcgtg cggcccttct tgatgttgtt
     2461 gcccagggcc tggacgttct tttccagcag acgaaactgg ttgccgaaat ccaccatctc
     2521 gtgtttcacc gcgcccagta tctgaccgat cacctccgcc ttttggctga tcgccagcgt
     2581 gtaatggcca agttggatcg ttcgcagcat gaccgccagc atcgacggcc ccatgatgac
     2641 gacgcgatgg tcgcggtgga tggcctccag cagaccgccg ttgcgggtga cctcggcata
     2701 gatcccctcg ctgggcagat acaggatcgc ccattcgacg gtgtatggcg gagcgatgta
     2761 tttggactgg attttccgag cctcctgccg gatgcgggtt tccagggcca tgcgcgcgtt
     2821 tttctcggcg agcgggtcgg cagcgtcgac cgcctccagc agacgggtgt agtcctcgac
     2881 ggggaatttc gcgtctacgg cgaggtaaac cggcgagccg ccctgaaccg gtagtttcag
     2941 ggcgaattct actgtgtcag ccgtggcggg gttgacacat ttgttggtct cgtaggcgtt
     3001 cggcggcagg atatcgtcca gagtggcctt gacctgcgcc tcgccccacc cgccgcggct
     3061 cttgacgttg gagaacagtt tcttcaggtc gccgacctgg ccggcgacgg ttttcacctc
     3121 ccccaccgcc tgctgcactt cggcgaattg cgcggtgatt ttcgcgaaat tctcggtcat
     3181 ccgcttttcg atgccctctt gcaacttctg gtcgaccacg ccctggattt cgagcagctt
     3241 ggcttcgttg ccttcccgca tttcgccgat tttcgtatcg acatgggcag tcagcttgat
     3301 gaaatcgtcg gtcagggcct tggaaacctt gccctggttt tccgccaggg tggtcgtcat
     3361 gtcgccgccg atgcgggtga ccgtgtcgcg gacatggccc agaccctcgg tcagcgcggc
     3421 ctgaaacgca gccaatgcct ttgtgacgcc ggcacccgac gcctccatct tggtgccgaa
     3481 ggcgtcggtt ttcgttgctt gttcaatact gagctggtgc aggccggcgg tcagcccggt
     3541 cagcagcacg cggctggcgt cggccgcctc ggccttggct ttcgcaccgg cggtttccag
     3601 gacggcggga acctcggttc cgagcctggt catcgcctgg gagacggccg tgatgtcacc
     3661 gcggaaggtt tcgatgctgg ccaggaaccg gtcgaagccg ccgcgcaatc cgtcctcgat
     3721 tttcgcgttg agaacgcgtt ccgcgtccgc cagggcaccg cgcagggcct cgatcccctc
     3781 ccgggttgcc ttgcccgatt gatcgaccag ggtcgacagg ttttgcagcg cctgggcgtc
     3841 accggctttg cgacggccac cgatccagcc gccggcgatg ccccccagca gtgcggcgag
     3901 cgccatgacg acggccagta tggtcagtgc ttcgacggtc acgcgattct cccgcagtca
     3961 gcggcggcgc gagtgcatcg cctgaccgcc accgcttagg ccgctttcgg ccggccccat
     4021 ggtgcgcggc tcgctcgttc ggcaccttgg gccagcgcgg caagcttggc ccaggcgatg
     4081 tcggggtgca cccggccgcc caggccgcaa tcggtcgcgg cgatgacccg ctcgcgtccc
     4141 accaggttgg caaaccttgt gatccgttca gccaccagat ccgggtgctc gaccacgttg
     4201 gtcgcgtggc tgacgacgcc gggcaggatc agcttgccgt cgggcagctt gacgtcgcgc
     4261 cacacgctcc attcatgctc gtggcggaca ttgccggcct cgaacgagta ggcgccggcg
     4321 ttgatcgcca gcatcacgtc gatgatgtcg cgcatgggga tatcggtggt atgcggtccg
     4381 tgccagcttc cccagcacag atggaaccgg atccggtccg tgggcaggcc cttgatggcg
     4441 tggttcagcg cctccacccg acgcatggag aatgcccgat acgcctcgac cgtcggttcg
     4501 gggttgatca tgtcccagtt ctcggcgatc gagggatcgt cgagttgcag gatcagcccg
     4561 gcatcgatga tcgccttgta ttcctcccgc atcgcatcgg cacaggcgaa caggaattcg
     4621 tcgtcggtct tgtagtggag gttgccgatg cgcgaggcgc tgcccggcgc caccgatgtc
     4681 atgaaaccct cctcgatccc cgccgccgtc aacgccgact tgaagttgtc gatatcggcc
     4741 ttgatcgccg cgtgaccggt gtaggtcagc ggacccacgc agaccggggt gtggggtgcc
     4801 cgcggtcccg tggtgatacc ggagtcgggg tcgttgtagg cggcggcgaa ccgggtgcgg
     4861 tcgcgccggt cgccgaagct ggtcagtacg acctcgttcg ggttcgaccg ccttgcgggg
     4921 acttcataca agccggggcc ggacagttcg agac
//
LOCUS       DATAVD010001775        10280 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3143268, whole genome shotgun sequence.
ACCESSION   DATAVD010001775 DATAVD010000000
VERSION     DATAVD010001775.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10280
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3143268"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            126..883
                     /locus_tag="VHX39_33895"
     CDS             join(126..456,456..883)
                     /locus_tag="VHX39_33895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611877.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEX3996193.1"
                     /translation="MHRYGLRDDQWDRIKDMLPGREGSVGVTAADNRLFVEAVIYRYR
                     AGIPWRDLPTRFGEWNNTHRRFSRWAKSGVWERIFRHLAADAENEYAMIDSTIVRAHQ
                     HSAGAQKKFGEDQAIGRSRGGLSTKIHALVDALGNAIGFFLTGGQVHDLVGADHLLPE
                     MEAATLIADKAFDADARVIEPLAAVGKKTVIPPKANRKSPRRYDRHIYKERHLIENFF
                     ARLKQYRAIATRYDKTARNFLAAVYLAAAVDWLN"
     gene            complement(955..1848)
                     /locus_tag="VHX39_33900"
     CDS             complement(955..1848)
                     /locus_tag="VHX39_33900"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEX3996194.1"
                     /translation="MSTSVSTRFLGSRAEGLCLVLFTACSWGASWPQTKFLLGELPPF
                     TMRTFCGTCGCLFAFAVALVRREHLIPPRDQWGRLFLFAMLNYGVFIVFSTEVQVYLP
                     ASEAIVLTYTLPIWASLLAWPLLGERPSWRQYLALMLAIGGVALLVGVGSAEARWQQL
                     PGVAMGLTAAVLFGLGTVLAKRTPLALPPATSVAWQVGFGTAVLAILAAFETADWSRV
                     TPAGWACITYVATMPMTIAYLAWFRALRLVPASMAATTVLVSPMVGVLGGTLVLGEPL
                     GQRQVVALGLTLAGVALAARG"
     gene            complement(1832..2401)
                     /locus_tag="VHX39_33905"
     CDS             complement(1832..2401)
                     /locus_tag="VHX39_33905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996195.1"
                     /translation="MAAILAKGVRVPARVHSRCLALDHPGQPIYAIVVSRRDGFTKAS
                     FHPHPEAAVRISLLRLAVPLLLALSGCHLLDQTDFDPRMRAKPPPPPVPNPEMRAALV
                     TIDYAKAEPDYRAALATAIQAAETKRPGSLYDVVAVVGDAGGAAVGQSRAAEVMTAIE
                     ADGVVAPRIQLGLAVDPGRKIPQVRVYLR"
     gene            2400..3668
                     /locus_tag="VHX39_33910"
     CDS             2400..3668
                     /locus_tag="VHX39_33910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent hydrolase"
                     /protein_id="HEX3996196.1"
                     /translation="MGQTASQTNQRIDGKRLWDTLMRFAEIGATAKGGVRRLALSGVD
                     KAGRDRFRAECEQLGLTVRVDAIGNMFARRAGRDPSRLPVLFGSHLDSQPSGGKFDGA
                     LGVLAGLEVMQSLNDLGITTEAPVELVNWTDEEGARFGHSLAGSGVWAGVYPEDHVLG
                     LKDTDGITVAEAIDQIGYRGPEPARHFPADAYFELHIEQGPILERENKQIGIVTGAQA
                     QVWYDAVTIGQDSHAGTTPPSTRKDALVCAARIIDLVDKMMRARGEDGRGTVGQLLVS
                     PNSRNVIPGEVRFSVEFRHPDPAEIDRLDAQFPREAQFIARDCGVALELKTLFRIPAQ
                     PFDPACVELVRQGAARAGYSTRDIVSGAGHDAVYVARHIPTAMIFTPCKDGLSHNEAE
                     SIEPEEATAGAQVLFEAVVARANRPLPEAT"
     gene            3668..4897
                     /locus_tag="VHX39_33915"
     CDS             3668..4897
                     /locus_tag="VHX39_33915"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX3996197.1"
                     /translation="MVGFNPRDAAFLANPYPAFRELRETAPVWRSPFGRTFLTRYEDA
                     SLLMRDRRLGKDYTDPDALIRRFGPTAMREPAVVELSHMMLMRDPPDHTRLRGLVTKV
                     FTARKIEEMRPGIQAIADRLLDQVAGAGEMDAIRDLAFPLPVLVICELLGIPEEDRAR
                     FVTATASGAALLNPVPPTRAELDQANESTLATGAYFEALFEQRRKQPHDDLLTLLVQA
                     EEAGDRLTTEELRANVTLLFAAGHETTVNLIGNGIWALLSNPSQWAAIQDNPTLIPNA
                     IEEILRYECPVQAVARTVAEPIEFGGSEFGKGELIVALIGAANRDPEVFPDPDRMDVA
                     RERLRPLSFGGGIHFCIGAQLARIEAEVVFSTLLRRMPDLTLADRAVPQWRESFTLRG
                     LTTLPVTWVASQRRGAA"
     gene            4995..6554
                     /gene="murJ"
                     /locus_tag="VHX39_33920"
     CDS             4995..6554
                     /gene="murJ"
                     /locus_tag="VHX39_33920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEX3996198.1"
                     /translation="MLRSVMTVGGWTMASRVLGFIRDMLMAALIGAGPVADAFFVANK
                     LPNLFRRLFGEGAFNAAFVPEFSGLLATDGPEAARRFACEAISVMTFWLGAITILGEI
                     FMPELMHVLAPGFAEIPDKFALTVDLGRITFPYLMLICLAALLSGALNGMEHFAAAAA
                     APVLYNLFAIAALLGLTPYVPTVGHAAAWGVSASGVVQLSLLIWAVHRAGMPMRIPRP
                     RLTPKVRLLMRRMAPGLIGAGAAQLNQAVDLIIASLLPAGTVSILYYADRIQQLPLGV
                     IGIAVGTALLPTLSRQVRGGDEAAALSSLNRAIEYALFLTLPAALALTVAAFPIIWVL
                     FGRGAFTIGTAHLASQSLAAYAIGLPAVVLLKVLAPAAFARGDTALPVKIGMVTLAVN
                     FMLNIVFNAGALAPESIAGSLPLLEHIGPPLATSIASTFNMLALGVALHRRGHFVADA
                     DLLRRLPRMGLAAVAMALTLWFAQAPLFHFGRWFGLVSLVTVGVGVYGVSAMLLGAFD
                     VRALRRMMRRR"
     gene            complement(7158..8381)
                     /locus_tag="VHX39_33925"
     CDS             complement(7158..8381)
                     /locus_tag="VHX39_33925"
                     /inference="COORDINATES: protein motif:HMM:NF033594.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HEX3996199.1"
                     /translation="MSASERDRSHLIRRTDEGTLSQREAAERLGIGVRQFKRLVRAWK
                     LDGDVGLVSRQRGRAAHNRLPETTRLRIERLLRETYSDFGATLAAEKLAERDGIVVSR
                     ETVRRIQTRLKLHRPKKRGEKRVFRIRDRRPRFGELVQIDGSPHDWFEGRAPRCTLIV
                     FVDDATSRLIALRFAPAECTKAYLEALRDQILTHGRPLAFYSDRHGIFRVNAKDAESG
                     DGKTEFGRVVERLGVGLINALTPQAKGRVERANQTLQDRLIKEMRLSNISSIEAAQAF
                     LPGFILKYNEKFGVPPRDETPAHRPWTKTADELDEVLARREERVLTKALTFSSGGKKY
                     CVKTAGPGTALRGARVALHHFADGRLRAYYKERPLAFTAYGTYPVPDPAEDEKTLDIR
                     VDAIVAAQQLLAEAA"
     gene            8601..9896
                     /locus_tag="VHX39_33930"
     CDS             8601..9896
                     /locus_tag="VHX39_33930"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3996200.1"
                     /translation="MANIIRAASRRDVLRISALSTVGGLLGAARAHAAPKSMTLMHES
                     SFIPPYDAYIKNTMAAAYEKATGIKINYDIISVGSLQTRITTAAETGSGPDMTCIYFN
                     WPYLYDDKLVDVSDIADEIGKKGGGWLESVKEAVVVNGKWKAIPFGNVGQLMNYRTDW
                     FAEVGFKEFPDTWEGLLEAGIKLKKADRPFGFELGHGFGDNHGWLYPLLWSYGGREVD
                     TDGKTVAIDSAETARAVDFCREFYQKTMFEDVLGWTDPSNNKAYLAEQISCTNNAESI
                     LYIAKKDFPDIGKATSQALNPKGPTGQRFHILAPWSHSIFTYAPDVKAAKDFLVWLMD
                     PQNVTGWYDVAVSYYAPFLRMFDNSSMWTEEPRNLPYRDSLATSHLPGWPAPISRQQG
                     ESVAKYVVVDMFAKACTGKSTKEVIGDAAAQLKQIFKPA"
     gene            9899..>10280
                     /locus_tag="VHX39_33935"
     CDS             9899..>10280
                     /locus_tag="VHX39_33935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEX3996201.1"
                     /translation="MSTTALPAAVYVPVPRKASSLRRWTEREDVFSWLMIIPPVVFLL
                     LLVGYPLVYGVWLSLENRPVARPGTFVGLANFIADAHDPVFWQVVQNTFVYTFFATVL
                     KMVGGLGLALVMNQDFKFKNLVRAL"
BASE COUNT         1890 a         3152 c         3253 g         1985 t
ORIGIN      
        1 ctgaggctgg ccggtgagtc tgatgagcaa cagtcggtat gattcgcgtg aggcgatgaa
       61 ttaggcgatt ccggcacgac gatttcttcg attcataggc ggtcagcttc aatgagggct
      121 gaccagtgca ccgttatgga ttgcgagatg atcagtggga tcgaatcaag gacatgctgc
      181 cgggccggga gggctcggtc ggcgtcaccg ccgctgacaa tcgcctgttc gttgaggccg
      241 tcatttatcg ttaccgagcc ggtattccgt ggcgggacct gcccacgcgt tttggtgagt
      301 ggaacaacac gcaccgccgc ttcagtcgct gggcgaagtc cggtgtctgg gaacggatat
      361 ttcggcatct cgccgcggat gcagagaacg agtacgcgat gatcgacagc acgatcgtcc
      421 gcgcccatca acatagcgct ggtgcccaaa aaaagtcggc gaagaccagg cgatcggccg
      481 ctcgcggggt ggactgagca cgaaaatcca tgcgctggtg gatgcgttgg gtaatgcgat
      541 tggtttcttc ctgaccggcg gccaggtcca tgacctggtg ggagccgacc atctgctgcc
      601 cgagatggaa gccgcgacgt tgatcgcgga caaggctttc gacgcggatg cgcgcgttat
      661 cgagcccctg gccgcagtgg ggaagaagac cgtgatcccc ccgaaagcca atcggaaatc
      721 accccggcga tatgatcgcc acatctataa agaacgccat ttgattgaga acttcttcgc
      781 aaggctcaag caataccgcg ccatcgcgac ccgctatgac aagaccgccc gcaactttct
      841 ggccgcggtt tatctcgcgg ccgcggtcga ttggctcaat tgacgacgcg ccctagttgg
      901 cgaaggccgg cgcgatgtgt ctcagcgggc cgatatcggt cgtccaggcc gccgctaccc
      961 tcgcgctgcc agcgccactc cggccagcgt caacccgagc gccacgacct gccgctgtcc
     1021 cagaggctcc cccagcacca gcgtcccgcc cagtacgccc accatcggag aaaccaacac
     1081 ggttgttgcc gccatcgaag cggggaccag ccgcagggcg cggaaccacg ccaggtatgc
     1141 gatcgtcatt ggcattgtcg ccacgtaagt gatgcacgcc catccggccg gcgttacccg
     1201 actccaatcg gccgtctcga acgctgccag tatcgcgagt acagccgtcc cgaagcccac
     1261 ctgccaggcg acactggtgg ccggcggcaa cgccagcgga gtccgcttcg ccagcaccgt
     1321 cccgaggccg aacagtaccg cagcggtcag gcccatcgcc acgccgggca actgctgcca
     1381 gcgtgcttcc gccgagccaa cgccaaccag caatgccacc ccaccgatgg ccagcatcaa
     1441 tgccaggtat tgccgccacg acggccgctc gcctaacaga ggccaggcca ggagcgaagc
     1501 ccagatcggc agcgtgtagg tgagcacgat cgcttccgat gcaggcaggt aaacctggac
     1561 ctcggtgctg aagacgatga acacgccgta gttcagcatc gcgaacagaa acagacggcc
     1621 ccattggtcg cgcggcggga tcaggtgctc tcgccgtacc aacgcgactg cgaacgcgaa
     1681 caggcagcca caggtgccgc aaaacgtgcg catggtgaac ggaggcagtt cgcccagcag
     1741 gaacttggtc tggggccagc tcgcacccca gctacaggcg gtgaacagga caagacacag
     1801 gccttcggcg cgcgagccca ggaaacgggt gctaacggag gtagacacgg acctgcggga
     1861 tcttgcgccc gggatcgacc gccaggccaa gctggattct cggcgcgacg acaccatcgg
     1921 cctcgatcgc agtcataacc tcggcggcgc gagactgccc gacggcggca ccgccagcat
     1981 ccccaacgac ggcgacaaca tcgtacaacg agccgggacg cttcgtctcg gctgcctgga
     2041 tcgcggtggc gagggcagcg cgatagtcgg gttcggcttt ggcatagtcg atggtcacca
     2101 gcgccgcccg catttccggg ttcggcactg gaggaggtgg cggtttcgcc cgcatcctcg
     2161 ggtcgaaatc ggtctggtcg agcaaatgac accccgataa ggccagcaac agcgggacag
     2221 cgagtctgag caatgagatg cgcacggcgg cttccggatg cgggtgaaaa ctggccttgg
     2281 tgaagccatc gcgacggctg acaacaatgg cataaatcgg ctggcccgga tggtccagag
     2341 cgaggcaccg tgaatgaacc cttgcgggaa cccgcacgcc cttggcaagt atcgctgcca
     2401 tgggacagac agcttcgcag accaaccaac gcatcgatgg caagcgctta tgggatacgc
     2461 tcatgcgctt tgccgaaata ggcgccacag ccaagggagg cgtgcggcgt ctcgctttgt
     2521 cgggcgtcga caaagccggg cgcgaccgct tccgcgcgga gtgcgagcaa ctgggcctga
     2581 ccgtccgggt tgatgccatc ggcaacatgt ttgcccgccg tgcgggccgc gatccgtccc
     2641 gccttccggt gttgttcgga tcccatctcg acagccagcc ctcgggcggc aaattcgacg
     2701 gcgcactggg cgtgctcgca gggctggagg tgatgcagtc gctgaacgac ctcggcatca
     2761 ccacggaggc tccggtcgag ctggtcaact ggaccgatga ggaaggcgcg cgattcggtc
     2821 acagcctcgc cggctccggc gtctgggctg gggtttaccc tgaggatcac gtgttgggcc
     2881 tgaaggatac cgatggcatc acagtcgccg aggcgatcga ccagatcggt tatcgcggcc
     2941 ccgaaccggc gcgtcacttc ccggccgatg cctatttcga actgcacatc gagcaaggtc
     3001 cgatcctgga gcgcgagaac aagcagatcg gcattgtcac cggcgcccag gcgcaggttt
     3061 ggtatgacgc ggtgaccatt gggcaggaca gtcatgccgg gacgacgccg ccgtcgacgc
     3121 gcaaggatgc gctggtgtgc gcggcgcgga tcatcgatct ggtcgataag atgatgcgcg
     3181 cgcgtggcga ggacgggcgc ggcaccgtgg gccagttact ggtctcgccc aacagccgca
     3241 acgtcattcc gggcgaagta cggttctccg tcgagttccg ccatcccgat ccggctgaaa
     3301 ttgaccggct cgacgcccag ttcccgcggg aggcacagtt catcgcgcgc gattgcggcg
     3361 tggcgttgga attgaagacc ttgttccgca tcccggcaca accgttcgat cccgcctgcg
     3421 tcgaactggt gcgtcagggt gcggcgcgtg ccggctattc gacccgcgat atcgtgtcgg
     3481 gcgccggtca cgatgccgtg tatgttgctc gccacatccc gaccgcgatg attttcacgc
     3541 cgtgcaaaga tggcttgtcg cacaacgaag ccgaaagcat cgaaccggaa gaggccacgg
     3601 cgggcgctca ggtgttgttc gaagctgtcg tggcacgggc caatcgtccg ttgccggaag
     3661 caacgtgatg gtgggattca atccgcgcga tgccgcgttc ctcgccaatc cctatccggc
     3721 gtttcgcgaa ttgcgcgaga ccgcgccggt gtggcgttct cccttcggcc gaacattttt
     3781 gacccgttac gaagacgcgt cgttattgat gcgcgatcgt cgactgggca aggactacac
     3841 agaccctgac gcgctgatcc gccgcttcgg tcccactgcg atgcgggagc ccgcagtcgt
     3901 cgagctgtcg catatgatgc tgatgcgcga tccacccgat cacacgcggc tgcgcggcct
     3961 cgtgacgaag gtgttcactg cgcgaaagat cgaggaaatg cggccaggca ttcaggcaat
     4021 cgccgatcga ttgcttgacc aggtggctgg tgccggcgaa atggatgcca tccgcgacct
     4081 tgcgtttccg cttccggtgt tggtcatttg cgaacttttg ggcatccccg aggaggatcg
     4141 cgcgcgcttc gtcaccgcaa ccgcttcggg cgcagcgcta ctgaacccgg tgccgccaac
     4201 gcgcgcggaa ctggaccagg cgaatgaaag cacgcttgcc accggtgcct acttcgaggc
     4261 gctgttcgag cagcgccgca agcagccaca cgacgatctg ctgacattgc tggtgcaggc
     4321 cgaggaagcc ggcgaccgtc tgaccaccga ggaattgcgc gccaacgtca ctttgctgtt
     4381 cgccgccgga catgaaacga ccgtcaacct gatcggcaac ggcatttggg cgctgctgag
     4441 caatccctcg caatgggcgg cgatccagga caatccaacg ctgatcccga acgccattga
     4501 agaaatcctg cgttatgaat gtccggtgca ggcagtggct cgcacagtgg ccgagccgat
     4561 cgagttcggc ggcagcgaat tcgggaaagg cgaactgatt gtcgctctaa ttggcgctgc
     4621 caaccgcgat cccgaggtgt ttcccgaccc tgaccgaatg gacgtggcac gcgagcggtt
     4681 gaggccgctg tcgttcggcg gcggcatcca tttttgcatc ggcgcacagc tggcacggat
     4741 cgaggccgag gtggtgtttt cgacattgct ccggcggatg cctgatctga ctctggcgga
     4801 tcgcgctgtg ccgcaatggc gggagagttt caccttgcgc gggctgacga cattgccggt
     4861 tacatgggtc gcctcgcagc gccgaggcgc ggcttgatcg ggccatccgt ccacaagctg
     4921 tgccggacga catgaccggc tcggtggccg gtcctgacgc ggcgacggtt gtcccgccca
     4981 aggccagaca ctcgatgctg agaagtgtga tgacggtcgg cggctggacc atggccagtc
     5041 gcgtcctcgg ttttatccgc gacatgctga tggcggcact gatcggcgca ggcccggtcg
     5101 ccgatgcgtt tttcgttgcc aacaaattgc cgaatctgtt tcgccggctg ttcggcgagg
     5161 gcgcgttcaa cgctgctttt gttccggaat tctccgggct gctggcgacc gacgggccgg
     5221 aggcggcacg tcgtttcgct tgcgaagcca tttcggtaat gactttctgg ctgggcgcga
     5281 tcacgatcct cggcgagatt ttcatgccgg aattgatgca tgtgctcgcg ccggggtttg
     5341 ccgaaatccc cgacaaattc gctttgacgg tcgacctggg ccggatcacg tttccgtatt
     5401 tgatgttgat ctgccttgcc gcgttactgt cgggtgcact gaacggcatg gaacatttcg
     5461 ccgccgccgc tgctgcgcca gtgctgtaca atttgtttgc catcgcggct ttgcttggat
     5521 tgacgccgta cgtgccgacc gtcggacacg ccgctgcctg gggggtttcc gcgtccggcg
     5581 tggtccaact gagcttgctg atctgggcgg tacaccgcgc cgggatgcca atgcggattc
     5641 ctcggccacg gctgacgccg aaggtgagat tgctgatgcg acggatggcg cccggattaa
     5701 tcggcgccgg cgcagctcag ctcaatcagg cggtggacct gatcatcgcc agtctgttgc
     5761 cggccgggac cgtgtcgata ctgtactacg ccgatcggat ccagcaattg cctctgggtg
     5821 tcattggcat cgcggtgggc acggcattgc tgccgacgct gtcgcgccag gtacgtggcg
     5881 gcgacgaagc ggcggcgctg tcgtcactca atcgagcgat cgaatatgca ctgttcctga
     5941 cgttgcctgc cgcattggct ctgaccgtgg cagcgttccc gatcatttgg gtgctgttcg
     6001 ggcgcggtgc ttttaccatc ggcacggcgc atttggcgtc gcagtccctg gcggcttatg
     6061 cgattgggct gccggcggtc gtgctattga aagtcttggc tccggcggcg tttgcgcggg
     6121 gtgacacagc gctgccggtg aaaatcggca tggtgacgct ggcggtgaac ttcatgttga
     6181 acatcgtgtt caacgcgggt gcgctggcgc cagagtcgat tgcgggatca ctgccgctgc
     6241 tggagcatat cggaccgccg ctggcgacca gcattgcgtc cacgttcaat atgctggcgc
     6301 ttggcgtcgc gttgcatcgc cgcggtcact tcgtcgccga tgccgatttg ttgcgacgtt
     6361 tgccgcgtat gggactggct gcggtggcga tggcgttgac gttatggttc gcgcaggcgc
     6421 cgttgtttca tttcggccga tggttcgggt tggtttcact ggtgacagtg ggtgttgggg
     6481 tttacggagt ttcggcgatg ctgctggggg cattcgatgt gcgggctttg cgcaggatga
     6541 tgcggcggcg gtaggcggtt ggctggcggg gtgacggagg cggcgggcaa aggaagtaaa
     6601 acgcaaaaag gcgcaaacgg gactgtgcgg atcagccggc catgcgtctt gttcccggcg
     6661 cgttgattgc tgtcgggcaa tgccgggcgc gaaaccatgc atcgtaggat agtaccgtcg
     6721 cactggcccc tttgcgcctt tttgcggtcc tttgcgtttt ttgcgttttc cttttctgct
     6781 tttaacacct tacgcatttt gatctctcgc gcacaggcgt ccggcgtcag tgccacgaga
     6841 cagccgggcc ctcccctgtc aacgcaacgc caaaatgtcc cctgtttccg cacagcgaga
     6901 atgtcccctt tgagcgccga ggttggggcg ctgatcgcgc tgtccccgct ttccggttcg
     6961 gttgaagcgc ctgctttccc gtcccggcct ggaacatcca aggccatgag gcggaacgac
     7021 ggggaagaga ggagcggagc ctcccggagc cacgcggagc gcgttcttca gcgcgagcat
     7081 ggcgaggatg gcgagcaccg gaccttcccc ggagtgagca tcatggcaca ctcagcccca
     7141 gccggtgagc caggccatca cgcggcttcg gccagcaact gttgcgcggc gacgatcgcg
     7201 tcgacccgga tgtccagcgt tttctcgtcc tcagccgggt cgggaaccgg atatgtgccg
     7261 taggccgtga acgccagcgg ccgctcttta taataggccc gcagccgtcc gtcggcgaaa
     7321 tgatgcagcg ccaccctggc accacgtagc gcggttcccg gaccggcggt cttcacgcaa
     7381 tacttttttc caccgctgct gaatgtcagc gctttcgtca gcacccgttc ctcgcgccgg
     7441 gcgagcacct cgtccagttc gtccgccgtc ttcgtccagg gccggtgcgc gggggtctcg
     7501 tcacgtggcg gaacaccgaa tttttcatta tacttaagta tgaatcctgg cagaaaggcc
     7561 tgtgccgctt caatcgaaga tatgttactt agccgcatct ccttgatcaa ccggtcctgc
     7621 aacgtctggt tggcccgctc cacccgtccc ttcgcctggg gggtcagcgc gttgatcaaa
     7681 ccaacgccca gacgctccac cacgcggccg aactcggtct tgccgtcgcc actttcggcg
     7741 tccttggcgt tgacccggaa gatcccgtgc cggtccgagt agaacgccag cggccggcca
     7801 tgcgtcagaa tctgatcgcg cagcgcttcc aggtaggctt tcgtacactc cgccggggcg
     7861 aaacgcagtg cgatcagccg gctcgtcgcg tcatcgacga acacgatcag cgtgcagcgt
     7921 ggcgcacggc cttcaaacca atcgtgcggg ctgccgtcga tctgcaccag ttcgccaaac
     7981 cgggggcgac ggtccctgat ccgaaaaaca cgcttctctc cccgcttctt cggccggtgc
     8041 agcttcagtc gtgtctgaat gcgccgcacg gtctcccgcg agacgacaat cccatcccgt
     8101 tccgccagtt tttccgcggc gagggtggca ccgaaatcgg aataggtctc gcgcaaaagt
     8161 cgctcgatcc ggagccgcgt ggtctccggc aggcggttgt gagcggcgcg gcctctctgg
     8221 cggctgacca ggccgacatc gccatccagc ttccacgcac gcaccagacg cttgaactga
     8281 cgcacgccaa tcccaagccg ttcggccgct tcacgctggc tcaatgttcc ctcatccgtc
     8341 cggcggatca ggtgcgaccg gtctcgctcg ctcgcgctca tcaacagata cccttccggc
     8401 ataaggtccc ctcatcgggc cacgcccaaa aggggacatt ctaactttgc aggaagggga
     8461 cattctcgcg ttgcgctaac agtgcgaggt gctcggttga cttcggcgat tcccgccctc
     8521 taacgtcgcc atgcggcgta aacaagtcgc atgacaaatg gcaaaccgcc acaacggcgg
     8581 gcgaagggaa gggtgggcaa atggcaaaca tcatccgcgc cgcgtctcgg cgggacgtat
     8641 tgagaatttc ggcgctgtcg acggtgggcg gattgctcgg cgccgcgcgg gcgcacgccg
     8701 cgccgaaaag catgacgctg atgcatgaga gttcgttcat tccgccgtac gacgcctata
     8761 tcaagaacac catggccgca gcctacgaaa aggcgaccgg catcaagatc aattacgaca
     8821 ttatcagcgt cggcagcttg cagacccgca ttaccacagc tgcggagacc ggttccggcc
     8881 ccgacatgac ctgtatctat ttcaactggc cctatctgta cgacgacaag ctcgtcgatg
     8941 tcagcgacat cgctgacgag atcggcaaaa aaggtggcgg ctggttggag tcggtgaaag
     9001 aagccgtggt cgtcaatggc aaatggaaag ccattccgtt cggcaatgtc ggacaattga
     9061 tgaattaccg taccgactgg tttgccgagg tcggcttcaa agaattcccg gatacctggg
     9121 aaggattgtt ggaagccggg atcaagctga aaaaggcgga tcgtccgttc gggttcgaac
     9181 tcggccacgg gtttggcgac aatcacggct ggctgtatcc actgttgtgg tcgtatggtg
     9241 ggcgggaagt ggacaccgac ggcaagacgg tcgcaatcga ttcagcagaa accgcgcgcg
     9301 ccgtcgattt ttgccgcgaa ttctaccaga aaacgatgtt cgaggatgta ctgggctgga
     9361 ccgatcccag caacaacaag gcgtacctgg ccgaacagat ctcctgcacc aataatgcgg
     9421 aaagcattct gtacatcgcc aagaaggatt ttccggatat cggcaaggcg accagtcagg
     9481 cgctcaatcc gaaaggtccg accggacaac ggttccacat cctcgcgcca tggagccatt
     9541 cgattttcac ctatgcccct gacgtcaagg cggcgaagga ctttctggtg tggctgatgg
     9601 acccgcagaa tgtgaccgga tggtatgacg tcgcggtcag ctattacgcg ccgttcctgc
     9661 gcatgttcga caattcgtcg atgtggacgg aagagccgcg caatctgccg tatcgcgact
     9721 ccctggcaac ctcgcatttg ccgggctggc cggcgccgat cagccgccag cagggcgaaa
     9781 gcgtggccaa atatgtcgtc gtcgatatgt ttgccaaggc ttgcaccggc aagtccacca
     9841 aggaggtgat cggcgacgcc gccgctcaac tcaaacaaat cttcaagccg gcctgacgat
     9901 gtcgaccact gcgctacccg ccgccgtcta cgtaccggtc ccgcggaagg catcgagcct
     9961 gcgccgctgg accgaacgcg aagacgtgtt cagttggctg atgatcattc cacccgtggt
    10021 attcttgctg ctgctggtgg gctatccgct ggtttacggc gtctggctca gtctggagaa
    10081 ccggccggtc gcgcggccgg gaaccttcgt ggggctggcg aatttcatcg ccgacgcgca
    10141 cgatccggtg ttctggcagg tggtgcagaa caccttcgtt tacacgttct ttgcgactgt
    10201 gttgaagatg gtcggcggac ttggcctcgc gctggtcatg aatcaggatt tcaaattcaa
    10261 gaacctggtc cgcgctttgg
//
LOCUS       DATAVD010001776         3922 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3143286, whole genome shotgun sequence.
ACCESSION   DATAVD010001776 DATAVD010000000
VERSION     DATAVD010001776.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3922
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3143286"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..598)
                     /locus_tag="VHX39_33940"
     CDS             complement(<1..598)
                     /locus_tag="VHX39_33940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEX3996202.1"
                     /translation="MLARAVLNDDLAQSRAARKQLKEALLTAVPLPSLRELVWVLRQG
                     AKLPKDDVAAAVRCLMNAGNVVVNRPAAELGLAVLEAGGDFADGAIVYEGAWLGGEIF
                     VSFDKHAITLVSGQGVAARRLSRRGRLLFHCHDQDQVAAGNVLIRHRHLTLHRRRNMI
                     LGGYEFRQSFRPNVDQRRGQNWNPIRVSTESVSFLKINE"
     gene            complement(619..885)
                     /locus_tag="VHX39_33945"
     CDS             complement(619..885)
                     /locus_tag="VHX39_33945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HEX3996203.1"
                     /translation="MASLAVTAKGQVTLRRDLLQHLGIRPGERVDLEKLPGRELRLRA
                     ARPTGTIDGFLHSLDGKVKLKKPLSIEDIDRIAAAGWAGNLDQE"
     gene            1221..>3922
                     /locus_tag="VHX39_33950"
     CDS             1221..>3922
                     /locus_tag="VHX39_33950"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HEX3996204.1"
                     /translation="MLVGVLRSARFGLGILLTLAVAGCVIGFTWYTVARTTNAQRADA
                     VQRADAIVTGLVASYAEQIGRQTLALDQTLATMQRDWEANPGQLNLGAARERAVILTG
                     ISRDMFLTDENGIIRQSSVPDFVGQSVFDVAVFRNAAEQSNQKQSGLYLGAAAVNPIM
                     RQWHLDAARTLHHPDGSFAGIIDADYRVSAISDVFAASAPTGNGFAALIGLTDGKLRA
                     TFGATGAAQDASVADTKMFAAIDGGNAGLWVGPSATDAVIRIHAFRKIPGRDLAVIAG
                     LDQNEVMQPVTTWQWQARLFAFGISGLTAFITVLILGGLRAGRRRAAAVAETRANLAA
                     AQALAEVSRAHADAIERRLHTTLAAVADGVAIFDSHLNLLEWNELFPERCGIASGLIR
                     AGMAMEAVLRSQSEAGCFGEVKDVEAEVDRRMALLRAGNLGDSLSFQTAARVIELRCR
                     PLAEGGFVALYTDVTEPLQARQALRDTHETLGREQSSRMRLLDVIGLELNARAAALTR
                     VIDGLQDMGMPPSTLDPLRRVGESLVGLASNAVDLPGMEAGSVVLRPALVEIRPVLRA
                     LVDAIQPEARDRGISVFQVINDTTPAELIADADRLRQIVSVLLHEALWFAAPDTMWLL
                     ADGGEDDGNEPLALRVTIRCFGAPIPEAMRTGMFPTFSGVAVPVDLDGSAKSVPGTGL
                     GPAIARHLTALMGGQLSCETWSATDGRTGNDFVLTLPPELLPGQTGRAPGHAPAEGRT
                     TPRTRVLLAGTATGLRMAAVTMLRRDGHLVDVAETGEAALRTLSSVPYDIAFIDGVLP
                     DTSAEVAVAAIRELTGPARLVPLVVLAQPHDEADESPWRDSGADDILAANPTLEDLTA
                     AMRRHIWFGRSFMPEPGSVTGQIDEFEEGVSILSNERIVELRSNL"
BASE COUNT          736 a         1218 c         1183 g          785 t
ORIGIN      
        1 actcgttgat tttcaggaag ctaaccgatt cggtgctcac tcgaatcgga ttccaattct
       61 gacccctacg ttgatctaca ttcggtcgaa atgattggcg aaattcgtat ccacccagga
      121 tcatatttcg gcgccgatgc agggtcaaat gccgatgccg gatcagcaca ttcccggccg
      181 cgacctgatc ctgatcgtgg caatggaaca agaggcggcc tcttcggctc aaacgccgcg
      241 cggccacgcc ttgccccgac accagagtga tcgcgtgctt gtcgaaggac acgaatattt
      301 cgccgcccag ccaagccccc tcatacacga tcgcgccatc ggcaaaatcg ccgccggcct
      361 caaggacggc aaggccgagc tcagcagccg gccggttcac caccacattg cccgcattca
      421 tcagacagcg aacggccgcc gccacgtcat ccttgggtag tttggcgccc tgccgaagca
      481 cccaaaccaa ctcgcgcaaa gacggcaaag gcacggcagt cagcaacgct tctttcagtt
      541 gttttctggc tgcgcgggat tgcgcgagat catcgttcaa cacggcccgc gcgagcacgt
      601 tggtatcaac ggagaccttc attcctgatc cagattgccc gcccaacccg cggccgcaat
      661 cctatcgatg tcctcgattg acagcggttt cttgagcttc actttgccgt cgaggctgtg
      721 caggaaacca tcaattgttc cggtcggccg cgctgctcgc aaacgcagtt ccctgcccgg
      781 cagcttttcg aggtcgaccc gttcacccgg cctgatgccc aggtgttgca acaagtcgcg
      841 cctgagcgtg acctggcctt tcgcggtgac ggcgagggaa gccacgagca tctccattgg
      901 cgctcaatgg cgggtaatat gaatcatcgt tacactcaac ccttacgtcc ctttaccggc
      961 ggctcggcgt ccccctggag gaaccgcgct gggacaacgg gcgcgggttt tgcctggcca
     1021 ttgccgcgca acagcactat tttcgttcaa aatctcacaa aacctataca gggatgtgcg
     1081 gagtatatta ttctgttcca tcaggtttga tggccttgga agcaatggcc tcgtgaagca
     1141 ggctcttatg ggggcaaacg tcaggagatg ccgttccacc cggtttgcgc gataatccct
     1201 atggacatcg gttctccgtg atgttggtcg gtgtcctccg atccgcacgg tttgggttgg
     1261 gcatcctgct gacgctcgct gtggcaggct gcgtgatcgg gttcacctgg tacactgtgg
     1321 cgcggaccac caacgcgcag cgcgccgacg cggtccaacg ggccgatgcg atcgtaaccg
     1381 gcctcgtcgc cagctacgcc gagcaaattg gccgacagac gctcgcactg gatcagaccc
     1441 tcgccacgat gcagcgcgac tgggaggcaa acccgggcca gctcaatcta ggtgccgctc
     1501 gggagcgtgc ggtgatcctg accgggatct cgcgcgatat gttcctgacc gacgaaaacg
     1561 gcatcatccg ccagtcgtcc gtgcccgact tcgttggcca gagcgttttc gacgtcgccg
     1621 tattccgcaa cgccgccgag caaagcaacc aaaagcagtc tggcctgtat ctgggcgctg
     1681 cagcggtcaa tccgatcatg cggcaatggc atctcgatgc ggcgcgcacc ttgcaccatc
     1741 cggatggctc gttcgccggc atcattgatg cggactatcg cgtgtcggcc atttcggacg
     1801 tgtttgcggc ctcggcgcca acaggtaacg ggtttgccgc cctgatcggc ctgaccgacg
     1861 gcaaattgcg cgcaacgttc ggtgccacag gagcggccca ggatgccagc gtcgccgaca
     1921 ccaaaatgtt cgcggccatc gacggcggaa acgctggact atgggttgga ccgtccgcga
     1981 ctgatgccgt gattcgcatc cacgccttcc ggaaaatccc gggccgcgac ctggcggtca
     2041 tcgccggcct ggatcaaaat gaggtcatgc agccagtcac gacctggcaa tggcaggcgc
     2101 gacttttcgc attcggtatc tcgggcctaa cggcgttcat taccgtactg atattaggtg
     2161 gattgcgtgc aggccggcgg agggccgcag cagtggccga aacgcgagca aatctggccg
     2221 ctgcccaggc gctggcagag gtgtcgcgcg cccatgccga tgccatcgaa cgccgtttgc
     2281 acacgaccct cgcagccgtt gccgacggtg tggccatatt cgattcacat ctgaatttgc
     2341 tcgaatggaa cgagctgttt ccagaacgct gtggcatcgc cagcggcctt attcgtgccg
     2401 gcatggcgat ggaggcggta ctgcgcagcc agtccgaagc aggatgtttc ggcgaggtca
     2461 aagacgtcga ggcagaggtg gaccggcgca tggctctgct gcgcgccgga aatcttggtg
     2521 acagcctaag ttttcaaacc gccgcccgcg tcatcgaact gcgatgccgg ccgttggccg
     2581 agggaggttt tgtcgcactc tataccgatg ttaccgagcc actgcaggcg cggcaggcac
     2641 tcagggacac gcatgaaacc ctgggccgtg aacaatcctc ccgcatgcga ttgcttgatg
     2701 tgatcgggct tgaacttaac gcgcgagcgg ctgctctgac ccgggtgatt gacgggttgc
     2761 aagacatggg catgccaccc agtacgctcg acccattgcg ccgcgttggc gaaagtttgg
     2821 tagggctggc gagcaatgct gttgacctgc caggcatgga agcgggctca gtggtgctgc
     2881 ggccggcatt ggtcgaaata cggccagtgc tgcgagctct tgtcgatgct atccagccgg
     2941 aagctcgcga tcgcggcatt tcagtgtttc aggtgatcaa cgacaccacg cccgccgaac
     3001 tcattgccga tgcagatcgg ctccgccaga ttgtgagcgt gctgttgcat gaggcgttat
     3061 ggttcgccgc acccgatacg atgtggctgc tcgcagacgg gggcgaggac gacggcaatg
     3121 agccgctcgc gctgcgtgtg acaatccgtt gctttggcgc accaatccct gaggcaatgc
     3181 ggaccgggat gttcccgacc ttctccggtg tcgccgtacc tgtcgatttg gacggttctg
     3241 ccaagtcagt tcctggtacc gggcttggtc cggcaattgc tcgccactta acggcgctga
     3301 tgggcggtca gttgtcctgt gagacatggt cagcgaccga tggtcgcacc ggcaacgatt
     3361 tcgtcctcac cctcccgccc gagctgttac ctgggcagac cggccgggca cccggccacg
     3421 ctcccgccga aggaaggaca acgcccagaa cacgggtgtt gctggccgga acagcgaccg
     3481 gcttgcgcat ggcggcggta accatgttac ggcgcgacgg ccatctggtt gatgtggccg
     3541 agacaggtga agcagccctc cgtacgctga gcagcgtgcc ttatgacatt gcctttatcg
     3601 acggcgtgct gcctgatacg tccgccgagg ttgccgtcgc cgccatccgc gagctgaccg
     3661 gaccagcgcg cctcgttccg cttgttgtac tggcgcaacc gcatgacgag gcggatgaga
     3721 gtccatggcg cgactcgggt gccgacgata ttctcgctgc gaaccctaca ttagaggacc
     3781 tcacagccgc catgcgccgc catatctggt tcggccggtc gttcatgcct gagccaggct
     3841 ccgtcaccgg tcaaattgat gagttcgagg agggggtttc gatcctgtcc aacgagcgga
     3901 tcgttgaact ccggtccaac ct
//
LOCUS       DATAVD010001777         6455 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_172879, whole genome shotgun sequence.
ACCESSION   DATAVD010001777 DATAVD010000000
VERSION     DATAVD010001777.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6455
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172879"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..649)
                     /locus_tag="VHX39_33955"
     CDS             complement(152..649)
                     /locus_tag="VHX39_33955"
                     /inference="COORDINATES: protein motif:HMM:NF023249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3341 domain-containing protein"
                     /protein_id="HEX3996205.1"
                     /translation="MIVASFAQEAGLVEAVRQCEAARVGPIETYTPAPLQGQSTASPI
                     PLIILLAGLAAGAMSFLLQSYSAAVAFRFDIGGRPPVSWPSFVPTTFENAALIAIAAG
                     FISFMAINRMPKLYEPVDEAAGMRGASRDRWVLRVASDNAAVVERAHALLRDLNPILV
                     EELPG"
     gene            complement(646..2001)
                     /gene="nrfD"
                     /locus_tag="VHX39_33960"
     CDS             complement(646..2001)
                     /gene="nrfD"
                     /locus_tag="VHX39_33960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012226649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEX3996206.1"
                     /translation="MSDVPVNALPVIDPGETIASMTNRVTQLPLRRGGWSWWWIALTP
                     SVLLLGLGIIGVGWAFYRGIRVWGNDWPVMWGFPILAYVWWIAIASGGTFVSAFFFLV
                     RAEWRTSINRMAETMTLFAVVCAGIYPILHLGRPWFAYWLFPYPNTMTLWPQWKSPLL
                     WDFMALFTYVVGSVLFWFLGLMPDLATMRDTATTKRAQYLYGFFAMGFRGSGQQWRHL
                     KATYGTLAALMAPLVVSVHSVVGLDFAGAATPGWHSTEYPPIFVFGALWSGLSTVMLL
                     LLAFRRPLGLMPLITERHIQALAKLMLTSSFCMSYAYIMDAFQSFYSGTEVDRIQFLN
                     RIHGDYAGVYWGMVFCNCVLPLLLCFRPMRRSHLLLAIIALGSVIGMWLERFNIVVMS
                     LPRTNLPSAWGGYTPTFWDWAIFGGTIGLFLTGFLVALRVVPIVSMYEMRELLADKGQ
                     R"
     gene            complement(1998..4856)
                     /locus_tag="VHX39_33965"
     CDS             complement(1998..4856)
                     /locus_tag="VHX39_33965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019091316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX3996207.1"
                     /translation="MPPVTRGPNQWRGRIEDAEAMEREFPALANALARPGSRRSVLRL
                     MAASMALGGLTGCDPSAPDENYVVAVNQAADIVPGLPNRYATALLDGGTAAGIVVVQR
                     MGRPIKVEGNPAHPASLGATSVHGQSVLLDFYDPDRSAGLLHDGDIAPWQDLQAAMLQ
                     QRTRLAETHGAGFRILTGRVVSPSTGAAIDRLLQQYPEARWHQWEAVSRDSVRNGTEL
                     AYGQPYDLLPHVAAADVLLALDSDLISSAPGHLRHARDLASRRNPVRARMNRIYAAEP
                     VPTLIGGAADHRFIAGPQEMDAAMRALAAAILGQAAVPDAPSWVATAVADLRSAGPHA
                     LVHAGPHLPADVHALVHQVNERLGGRGTTFDLISPVAYRPDDETAGMTSLLDAMRSGQ
                     IDTLLILDSNPAYTVPGFREALRRVKFSLCTADTPNETARVSTWYVPGAHLFETWGDA
                     RAHDGTVSIQQPQALPLYGGLGAFEVLALFRDGMSTTSLDTVRRTWRDRLDDRAWRDA
                     LASGVVPGTVHAPVTAGLLANATVALPQTPARTLNLLIRPDANLIDGRHANNPWLQEL
                     PRPLGKIAWDNPLLLAPATARGLGLQNGDVVDLEMGSRRLRFPIWMVPGVAADCVVAF
                     LGFGRTSAGEVGNGVGVDVTQLLGIDAVPVLHKTGRRVRVASTDHHNMLEVDRKLVDE
                     VVRHGTLAAFAADPNFLHRSGQNPEIYQPPVPRPPTAGVAWGMSVDLNACIGCNACVV
                     ACQAENNVPVVGKEQMLLGREMHWLRIDRYYEGTEDDPVSLLQPMLCMHCEQAPCEPV
                     CPVEASIHDSEGLNLQVYNRCIGTRFCSNNCPYKVRRFNFGAWANEEHRAPISRNPDV
                     TVRGRGVMEKCTFCVQRIAAARIAHDRDGTKEQTVTACQAACPTQAFTFGDINDQTSE
                     VAKRKESPLDYTLLAEQNTRPRLTYEARIVNRNPTIAS"
     gene            complement(4844..5497)
                     /locus_tag="VHX39_33970"
     CDS             complement(4844..5497)
                     /locus_tag="VHX39_33970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012226654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEX3996208.1"
                     /translation="MPAIFPPQATVIGRTILLGFGVLALGVIGWWWLAPRTDWARKVG
                     FMITQPVPFSHQHHVSGLGIDCRFCHASVEVSANAGLPPTRTCMTCHSQIWTNANLLA
                     PVRRSLADNRPLVWGRVNNLPDYVYFDHSIHIAKGVGCSSCHGPVDQMPLLYKAQSLT
                     MEFCLDCHRDPGPRLRPESEIYDTEWRRAADTPTPAALLTHYKVPDRVLTDCSICHR"
     gene            5731..5949
                     /locus_tag="VHX39_33975"
                     /pseudo
     CDS             5731..5949
                     /locus_tag="VHX39_33975"
                     /inference="COORDINATES: protein motif:HMM:NF013752.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(6187..>6455)
                     /locus_tag="VHX39_33980"
     CDS             complement(6187..>6455)
                     /locus_tag="VHX39_33980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3996209.1"
                     /translation="PVGSVDEALSFIETEHGVFDAAIVDVNLHGTKSYPIADALVTRG
                     KSFVFATGYGADALDAAYQHFPRCEKPFNAERLVAALAAAEPIN"
BASE COUNT         1283 a         2069 c         2017 g         1086 t
ORIGIN      
        1 accggctgcg atccatattc gacgatcccg cccgggattt gtcccggcgc gacccggctg
       61 ttcgcgtagg cattgtcttt cgcctgatgg atcatgtcgt cacacccgct gagcagcaat
      121 ggcagcatca aggccatggc ggtgcgacat ctcaacctgg caactcctcg accaggattg
      181 gattaaggtc acgcagcaat gcgtgcgcac gttccaccac cgcagcgttg tcgcttgcga
      241 cccggagcac ccagcgatcc cggctggcgc cgcgcattcc ggcggcctca tcgaccggct
      301 cataaagctt tggcatgcgg ttgattgcca tgaacgagat gaaaccggcg gcgatggcaa
      361 tcagtgcggc attctcgaac gtcgtcggaa cgaacgatgg ccatgacaca ggaggccgtc
      421 cgccgatatc gaaacgaaag gcgacggcgg ccgaataact ttgcagcaag aagctcattg
      481 cgcccgccgc gaggccagcc aacagaatga tcagggggat cggcgaggca gtcgactggc
      541 cctgcagcgg agccggcgta taagtctcga tcgggccgac acgcgccgcc tcacattgcc
      601 gcaccgcctc cacgagacca gcctcctggg cgaacgaagc aacaatcatc gctgcccctt
      661 atcagcgagc aactcacgca tttcgtacat cgacacgatc ggcaccacgc gcagcgcgac
      721 caggaagccc gttaaaaaca gcccgatcgt tccaccgaaa atggcccaat cccaaaaggt
      781 gggcgtgtag ccgccccagg cagagggaag attcgtccgc ggcagactca tgacgacgat
      841 gttgaaccgc tcgagccaca tgccgatgac cgagccaagc gctataatcg ccagcaggag
      901 atggctgcgc cgcatcggcc gaaagcacag cagcaacggc agtacgcagt tgcagaacac
      961 catgccccaa tagactccgg cataatcgcc atggattcga ttgaggaact gtatccggtc
     1021 gacttcggtg ccgctgtaga acgactggaa cgcgtccata atgtaagcgt acgacatgca
     1081 gaaactgctc gtcagcatca attttgccag cgcctggata tgccgttcag taatcagcgg
     1141 catgaggccg agcgggcggc ggaatgccag cagcagcagc atgacggtgg acaggccgga
     1201 ccacagcgcg ccaaacacaa aaatcggcgg atactcggtc gagtgccagc cgggtgtcgc
     1261 tgctcccgca aaatccagtc cgacgacgga atggaccgac acgaccagcg gcgccatgag
     1321 cgcggccagc gtgccgtaag tcgccttcag gtgcctccat tgctgcccgc tgccgcggaa
     1381 gcccatggca aagaacccat acagatattg tgctctcttc gtcgttgcgg tgtcgcgcat
     1441 cgtggccagg tcgggcataa ggccgagaaa ccagaacagc accgagccta cgacgtaagt
     1501 gaacagcgcc atgaagtccc acagcagcgg cgacttccat tgcggccaaa gggtcatggt
     1561 gtttgggtaa gggaacaacc aataggcgaa ccatggccgg cccagatgca gaattgggta
     1621 aatgccggca cacacgacgg cgaacagcgt catcgtctcc gccatccggt tgatcgaggt
     1681 ccgccactcg gcccgcacca ggaaaaagaa cgcggacacg aacgtgccgc cggaggcgat
     1741 ggcgatccac cagacgtagg ccagaatggg aaatccccac atcacgggcc aatcgttgcc
     1801 ccagacgcga atgccccgat agaacgccca gccaacgccg attatcccga gcccgagcag
     1861 gaggaccgag ggcgtcaagg caatccacca ccacgaccag ccgccgcggc gcagcggcaa
     1921 ttgagtgacg cggttggtca tcgacgcaat cgtttcgccc gggtcgatca ccggaagcgc
     1981 gttgacgggc acgtcgctca cgaggcgatc gtcggattgc ggttgacgat ccgcgcttca
     2041 taggtcagcc gcggccgggt gttctgctcg gcgagcaacg tgtaatcgag cgggctttcc
     2101 ttgcgcttcg ctacctcgct cgtctggtcg ttgatgtcgc cgaaggtgaa cgcctgggtt
     2161 gggcatgcgg cctgacacgc ggtcaccgtc tgttccttgg tcccgtcgcg gtcgtgcgcg
     2221 atacgtgctg ccgcgatccg ctgcacgcag aacgtacatt tctccatgac tccccgacca
     2281 cggacggtca cgtccggatt gcgggagatc ggcgcgcgat gctcctcgtt ggcccaggcg
     2341 ccaaagttga aacggcgtac tttgtagggg cagttgttgg aacagaaccg tgtgccgatg
     2401 cagcggttgt agacctgcag gttgaggccc tcgctgtcgt ggatcgacgc ctcaaccggg
     2461 cacaccggtt cgcaaggcgc ctgctcgcag tgcatgcaca acatgggctg caacaggctg
     2521 acgggatcgt cctccgtgcc ttcatagtag cgatcgatac gcagccaatg catctcgcgg
     2581 ccgagcagca tttgctcctt gccgaccacc ggtacgttgt tctctgcctg gcaggccacg
     2641 acgcaggcgt tgcaaccgat gcaggcgttc aggtccacgc tcatgcccca ggcgacgccg
     2701 gcagtcggag gccgtggaac ggggggctga taaatttccg gattctgacc agaccggtgc
     2761 agaaaattgg ggtcggcggc gaaggctgcg agcgtcccgt ggcgcaccac ctcgtcgacg
     2821 agcttccggt cgacctccag catattatgg tggtcggtgc tcgcgacacg gacacgccgt
     2881 ccggttttgt gcagcacggg aaccgcgtcg atgcccagaa gctgtgtgac atcgacgccg
     2941 acgccgttgc cgacctcgcc ggcgctggtt cgtccgaagc ccagaaaggc gacgacacaa
     3001 tccgccgcca cgcccggtac catccaaatc ggaaaacgga ggcggcggga acccatttcc
     3061 aggtccacca catcgccatt ttgcagcccg agcccgcggg cggtggccgg cgcgagcaaa
     3121 agcggattgt cccacgcgat cttgcccaaa ggccgcggca gctcctgtag ccaaggattg
     3181 ttggcatggc gcccatcgat caggtttgca tcaggcctga tcagcaggtt cagggtccga
     3241 gcgggcgtct gtgggagagc gacagtcgca tttgccaaca gtccagcggt gaccggcgcg
     3301 tgtaccgttc ccggcaccac gcccgaggcc aacgcatccc gccacgctcg gtcgtccaat
     3361 cggtcccgcc atgtccggcg cacggtgtcg aggctggtcg tggacatgcc gtcccggaac
     3421 agcgccagca cctcgaacgc gccgagcccg ccgtagaggg gcaacgcctg cggctgttgg
     3481 atcgagacag tgccgtcgtg cgctcgcgcg tcaccccagg tctcgaacaa atgcgcgccc
     3541 gggacgtacc aggtcgagac gcgggcggtc tcgttcggcg tgtctgcagt gcacaggctg
     3601 aacttcacgc gcctcagcgc ctcgcggaaa cccggcacgg tgtacgccgg attgctgtcc
     3661 aggatgagca acgtatcgat ctgcccggat cgcattgcgt ccaacaggct ggtcatgccg
     3721 gcggtctcgt cgtccggtcg gtacgcgacc ggactgatca ggtcgaaggt tgtgccgcgg
     3781 ccgccaagcc gttcgtttac ctgatgcacc agcgcgtgca cgtcggcggg caaatgcggc
     3841 cccgcgtgaa ccagggcgtg tgggcctgcc gacctcaggt cggcgaccgc ggtcgcaacc
     3901 caggacggcg cgtccggcac ggccgcctgc ccgaggatgg cagcggccaa cgctctcatc
     3961 gcggcatcca tctcctgagg gccggcgatg aaccgatggt ccgccgcacc gccgatcaag
     4021 gtcggaaccg gctcggcggc atagatccgg ttcatgcgcg cacgcacggg attgcggcgg
     4081 gaggcaaggt ctcgcgcatg gcgcaaatga cccggcgccg aactgatcag atcgctgtcc
     4141 agggctaaaa gcacatccgc cgcggcgacg tgaggcaaca ggtcgtaggg ttgcccgtag
     4201 gccagttctg tgccgttgcg aacgctgtcg cgcgagacgg cttcccattg gtgccagcga
     4261 gcctcgggat attgttgcag caggcgatcg atcgccgccc cggtactggg cgatacgacc
     4321 cgcccggtca ggatgcggaa accggcgcca tgcgtctcgg caaggcgggt gcgttgctgc
     4381 agcatggcgg cctgaaggtc ctgccaaggc gcaatgtcgc cgtcatgcag caggccggca
     4441 gatcggtccg gatcgtaaaa gtccagcaac accgattgcc cgtggacgct ggtggcaccc
     4501 aggctggccg ggtgggctgg attgccctcc accttgatcg gacggcccat gcgctgaacc
     4561 acaacgatgc ctgcggccgt gccgccatcc aacaacgccg tcgcgtaccg gtttggcagc
     4621 ccaggaacaa tatccgctgc ctggtttacg gcgaccacgt agttttcatc gggcgcgctc
     4681 gggtcgcatc ctgtgagccc gcccaacgcc atgctcgcgg ccatcagacg gagcacactg
     4741 cggcgcgacc cggggcgggc caacgcgttc gccaaagccg gaaactcgcg ctccattgcc
     4801 tcggcatctt caatgcggcc tcgccactgg tttgggccgc gcgtcaccgg tggcatattg
     4861 agcaatccgt caggacccga tccggaacct tgtaatgcgt gagcagcgcc gccggagttg
     4921 gcgtgtcggc cgcacgacgc cactctgtat cataaatctc gctttccgga cgaagccgcg
     4981 ggccggggtc acgatgacaa tccaggcaaa attccatggt gagcgattgg gccttataaa
     5041 gcagcggcat ttggtccacc gggccatggc acgaggaaca cccgactccc ttcgcgatat
     5101 gaattgagtg gtcgaagtag acatagtccg gcagattatt gacccggccc cagaccagcg
     5161 gtcggttgtc ggccaggctg cgccgaaccg gcgccagcag atttgcattg gtccagattt
     5221 gcgaatggca cgtcatgcag gtccgggtcg gcggcagccc ggcgttcgcg gaaacctcga
     5281 ccgacgcatg acagaaacgg caatcgatcc cgagcccgga gacgtggtgc tgatggctga
     5341 atggcaccgg ctgcgtgatc atgaagccaa ccttccgagc ccaatccgtt cgcggcgcca
     5401 accaccacca gccaatcacc cccagtgcca gcacgccgaa gccaagcaga atggttcggc
     5461 caatgacggt ggcctggggc gggaagatcg ccggcattgg tctggcggtc ctccgatgac
     5521 ggcgtggaat ggggtttcgg tcgttgtaat gttttggaca ggcggcggtt ccatcggtgc
     5581 acgcggcgat ggcaagcgat tcagcctcag cgcaagaccc cggaagcgac cgaggtcgct
     5641 caccggaaat tgcgcgccga tgcgtcacgc aagcagaaga cgctcgatcc gcgcagcctt
     5701 ttcgcggcgg agttcatcat ccccggtccc tcgctgcccg ccgagggtta tccggccgac
     5761 gaagtcctcg ccgtctatcg cctgcgccgg cagatcgaac tggcgttcaa gcgcctgaaa
     5821 tcgcttctca aaatggacga gattccgacc ggtaccgaac gggcatcacg aagttggctg
     5881 accgcgcatc gcataatggc cttgttgtgc gacgatatca gccaggcgtt cctggaccct
     5941 tccccctgag gacatgctgg acgcggcttc gtctgggaca cctccctccg tctgcgaaat
     6001 ccgctcttcc gctttgccta acgctaatcg cgttgagcag atcggatggt taacgactca
     6061 aaacggtgat ccgaagcagg caagcgaccg gcgaccgcac atgccctgct ctgactgata
     6121 gcggaggcca ggcggccaga ttttcgcccg gccgcgtttc ttccaaggcg tcgaaccgga
     6181 tcgccgctaa ttgatgggct cagccgcggc gagtgccgcg acaagccgtt cggcgttgaa
     6241 cggcttttcg cagcgaggaa aatgctggta ggcggcatca agcgcatccg cgccataccc
     6301 ggtggcgaac acaaaactct tgcccctggt aaccagggcg tcggctatcg gataggattt
     6361 cgtgccgtga agattgacat caacaatggc ggcgtcgaac accccgtgtt cggtctcgat
     6421 gaatgagagg gcttcatcca cagaaccgac cggcc
//
LOCUS       DATAVD010001778         2328 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1468679, whole genome shotgun sequence.
ACCESSION   DATAVD010001778 DATAVD010000000
VERSION     DATAVD010001778.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2328
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1468679"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(173..491)
                     /locus_tag="VHX39_33985"
                     /pseudo
     CDS             complement(173..491)
                     /locus_tag="VHX39_33985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665393.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(616..>2328)
                     /locus_tag="VHX39_33990"
     CDS             complement(616..>2328)
                     /locus_tag="VHX39_33990"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEX3996210.1"
                     /translation="RAQGRYLVFLNDDIEITEPGWLDTLIAHAERPEVGIVGARLLYP
                     DGRVQHAGMFWAAGAMAGRHSFRFVARSDPGYFGLAMTTRNVIMVTGACMMVRREWFE
                     AIGGFDEAHSIVNNDVDFCLRSWEAGKLTVYEPAATLIHHEAVSRHTLSEDYDADGFW
                     TKWGKLIAAGDPYYHPNLSREGENYAAEREPIQLLTAGHPLLSVAEIRRILVVKLDHI
                     GDLITSIPAMKKLAAHFPQAELYLMTSPTNRALADLMPRVKEVIELEFFFPRSELARQ
                     RELSDDDLAALEQKLKPYHFDLAIDLRMHFQTRKILRYTGAKWRAGYDTNNLFPWLDI
                     AVEQEADVTLLSKRSQIGDDLCRLVDAVILATDRERSTLRVQNGKPPTGLARSGRPLV
                     CIHPGVGDPTRRWPPGHFGALIDLLVSNHDVEIALIGSPDEAETASEVLDKVVDKAAV
                     QWLVGTTPLAEIPALLASAVLFVGNNSGPNHVAAGLGIPAIGVYSGVVDARQWGAMGP
                     NAVVLQRQMHCSPCYIGNTADCPRGMACVTELLPEDVYRVCQRMLAIKATAAPDPHNP
                     EQRP"
BASE COUNT          437 a          683 c          763 g          445 t
ORIGIN      
        1 ataggggcct ctacaccaaa ataattggat ccttagacca gtcgccgaga tcatcagtgt
       61 ttggagaatc cttatccagc cgataggtcc tggagtccgc ccgagaatag gggagactga
      121 gtcaggcgcg ggcgaggcgt ctcaagagta gtttgtcggc cgtgaagtag ttttaagcgg
      181 gttgtgggcg tgttcccaga gttgggagca aagtgcaaag ggcgtgcaaa cgtctcctca
      241 gccagcgcag gagggagaag ttgtagccgg cggcggcgag gacggcgttg atgcggtcgc
      301 cgtcgcgtcc cttgagagtt tcggcccatg cggtgctcgg ccttgaggtg gccgatgacg
      361 ggctcgacgg cggcgcggcg tttcagttcg cggcggatcg ggcgggttac ccttcggacc
      421 tggccggtga tccacacccg gaacttgtgc gggtggctgt ggccgcgata gccccggtcg
      481 acatggatgc ggcgggtcta gtttgatgct ggcgatgcag agccgggctc tgccgttagc
      541 gatgctggcc tcgaagtccc tggcgaggcg gcgagtgcga tacctgagcc agcggctcga
      601 acgagtgccg cggcgctacg gccgttgttc ggggttgtgc ggatcggggg cggccgtggc
      661 tttgatcgcc aacatccgct ggcacaccct gtacacgtcc tccgggagca gctccgtcac
      721 acaggccatt ccccgcgggc aatctgcggt attgccgata tagcaggggc tgcagtgcat
      781 ctggcgctgt agcacgacgg cgttagggcc catcgcgccc cattggcgcg cgtccacgac
      841 gccggaataa actccgatag ccggaatgcc aagtccggcg gcgacatgat tgggaccact
      901 gttattgccg acgaacagga cggccgaagc gagcaaggcg gggatctctg cgaggggggt
      961 cgtgccgaca agccactgca ccgccgcctt gtccacaacc ttgtcgagca cctccgatgc
     1021 ggtctcggct tcatcaggac tgccgatcag ggcaatttcg acatcatggt ttgacacgag
     1081 caggtcgatc agcgcgccga agtggccggg cggccatcgc cgcgtcggat caccgactcc
     1141 cggatgaatg caaaccagcg gcctcccgct ccgtgcgagc cccgtcggcg gtttgccatt
     1201 ttgcacccgc aaggtactcc gttcgcgatc ggtggcaaga atgaccgcat cgaccagacg
     1261 gcacagatcg tcgccgattt gcgaccgctt gcttagcaag gtcacgtcgg cctcctgctc
     1321 gaccgcgata tcgagccagg ggaacaggtt gttggtgtcg taccccgcac gccatttcgc
     1381 accggtgtac cgtaggatct ttcgcgtctg gaagtgcatg cgcagatcga tggccagatc
     1441 gaaatggtac ggtttgagct tctgctctaa tgcggcaagg tcgtcgtcgg aaagctcccg
     1501 ctggcgtgcc agctcggagc gggggaagaa aaattcgagc tcaatgacct ccttgacgcg
     1561 aggcatgagg tccgccagcg cccggttggt cggtgacgtc atgaggtaga gttcggcttg
     1621 cgggaaatgc gccgcgagct ttttcatcgc agggatcgat gtgatcaaat ccccaatgtg
     1681 gtcgagcttt accactaaga tgcgacgaat ttcggccacg ctcagaagcg ggtgacccgc
     1741 agtgagcaac tggatcggct cgcgctcggc cgcataattc tcgccttcac gcgaaaggtt
     1801 tgggtggtag tacgggtcgc ccgcggcgat aagcttgccc cacttggtcc agaagccatc
     1861 ggcgtcatag tcttcagaca gggtgtggcg gcttaccgct tcgtgatgga tcaaggttgc
     1921 cgcgggctcg tagacggtaa gcttcccggc ttcccaactg cgcagacaga aatcgacatc
     1981 gttgttgacg atcgaatggg cttcatcaaa cccgccgatc gcctcgaacc attcgcgtcg
     2041 gaccatcatg caggcgccgg tgaccatgat cacattccgc gtggtcatgg cgagaccgaa
     2101 atatccggga tcggatcgcg caacaaagcg gaacgagtgg cgccccgcca tggcgcccgc
     2161 ggcccagaac attcccgcat gctgaacccg cccgtcggga tagagcaagc gagccccgac
     2221 gattccgacc tccggacgct cggcatgggc gatcagcgtg tcgagccaac cgggttcggt
     2281 gatctcgatg tcgtcgttga ggaaaacgag atacctgccc tgggccct
//
LOCUS       DATAVD010001779         1875 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2962353, whole genome shotgun sequence.
ACCESSION   DATAVD010001779 DATAVD010000000
VERSION     DATAVD010001779.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2962353"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..336
                     /locus_tag="VHX39_33995"
     CDS             <1..336
                     /locus_tag="VHX39_33995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996211.1"
                     /translation="PWTVPLTGSSAISATLGRCITDLTRQVQAAHAATPAQPAPTQNA
                     TQPFNSSPAGAQPPANTAAPAAQPPGNQPSGNQPPGNQSSGNQSSGNQSSGNQPAATP
                     QSGTTQPAH"
     gene            complement(355..1200)
                     /locus_tag="VHX39_34000"
     CDS             complement(355..1200)
                     /locus_tag="VHX39_34000"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX3996212.1"
                     /translation="MGIMRTEASTMSHSILAILDRRQTAHPVLAVAALAARRMGDSRI
                     EALHLRHDALEGFMPTEEVMTERREQEIERAAAQKSADLHGIFDAWRRESGIGEWREV
                     IGETARVVAAEAVNAELVIIGHGVGRYQGDAKEAVHVSLFDAKVATLLVPEAVPASLG
                     RSVAIAWKPSEAADRAIDAASALLLRAESVTVLMATEDGDREAVPDGLFQRLQQAGVP
                     VAVRRFQAGGRTIGDALIEEAHAVTADLLVMGAYTHSRLTEFILGGATREVLAAADLP
                     VLMHH"
     gene            complement(1207..1572)
                     /gene="crcB"
                     /locus_tag="VHX39_34005"
                     /pseudo
     CDS             complement(1207..1572)
                     /gene="crcB"
                     /locus_tag="VHX39_34005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385766.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
     regulatory      complement(1816..1869)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01734"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Fluoride riboswitches increase expression of
                     downstream genes that help mitigate the toxic effects of
                     very high levels of fluoride; They are found in a wide
                     variety of bacteria and archaea; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="fluoride"
                     /db_xref="RFAM:RF01734"
BASE COUNT          388 a          687 c          525 g          275 t
ORIGIN      
        1 ccctggacgg tgcccctgac cgggtcctcg gcaataagcg ccacgctggg ccgctgcatc
       61 accgacctca cccgccaggt gcaggctgcg cacgcggcca cgccggccca accagcgccg
      121 acacaaaatg cgacgcagcc gttcaattcg tcccccgccg gcgcgcagcc acccgccaac
      181 accgccgcgc cggcagcgca acccccgggc aaccaaccct cgggcaacca acccccgggc
      241 aaccaatcct cgggcaacca gtcttccggc aaccagtctt ccggcaacca accggcggcc
      301 acgccgcaat cgggaacgac ccagcctgcc cactaacgcg cgtgaatcgg cctctcaatg
      361 gtgcatgagc acaggtaggt ccgcggcagc gagaacctcg cgagtggcgc cgccaaggat
      421 gaactcggtc aaccggctat gggtgtaggc acccataacc agcaggtcgg cagtcacggc
      481 gtgcgcctcc tcgatcagcg cgtctccgat tgtgcgcccg ccggcctgga aacggcgcac
      541 cgccacggga acgccagcct gttgcagacg ctgaaaaagc ccgtcaggca ccgcctcccg
      601 gtcgccgtct tcggtcgcca tcagaacagt gacactctcg gctctcaata acagcgccga
      661 cgcggcatcg atcgctcgat ccgccgcttc gctcggcttc caggcaatcg ccacgctgcg
      721 cccgagcgag gccggcaccg cctccggaac caaaagcgtg gccaccttgg cgtcaaacaa
      781 ggacacatga acggcctctt tcgcatcgcc ctgataacgc ccaaccccat ggccaataat
      841 gacaagctcg gcgttgacgg cctccgccgc gacaacccgg gcggtctcgc cgatcacctc
      901 ccgccattcc ccgatcccgg actcccgccg ccaggcatcg aaaatcccat gcaggtcagc
      961 cgatttctga gcggcggcgc gttcgatctc ctgctcacgc cgttcggtca tgacctcctc
     1021 cgtcggcatg aagccttcga gagcatcatg tcgaagatgc agcgcctcga tgcgtgaatc
     1081 ccccatgcgc cgggccgcga gtgcggccac cgccagcacc ggatgcgcgg tttgccgccg
     1141 gtcgagaatg gcaagaatac tgtgggacat ggtggacgcc tccgttcgca ttatgcccat
     1201 ccgctcggcc gaaaaatgtc cgagcgtgac ggccaacaaa catatggtga cagaaagcag
     1261 cacgttgccc atcgcaccga accaacttcc gtcgcgcgcg aggctgagtg tctgcaagct
     1321 gaaggacgag aacgtggtga acccgccgca aatgccgacc atgacgaaaa tgcgcaggtt
     1381 cgaactcgcc ggcatcgccc cctccggcac ggtcaaggca ccgatgaatc cgatgacgaa
     1441 actgccgaga atgttgatgg cgatcgtgcc ccaggggaaa ctctctcccc atgcccgagc
     1501 ggccatcaat ccgaacccgt aacgggagac gccgccgatg gcgctgccga gagcaaccca
     1561 cagatagggg atcatctgcc cagcccatcg cgcacagcat atcggtcacc gctttcggat
     1621 ccgagggccg aagcgtccag gcctatcgtt ggcgggaagc aaggaaacgg cccagaccac
     1681 gcctgaacct ccgaagcctt tatccgatcg atcattgtgt ccgctccatc gttcaccatc
     1741 aggacgcgcg aggcggaaaa acccactcgc gatagatgct gtcgatttcg gacagactcc
     1801 caccgcgaac gctctcgcgc ggtaggagtc atcagccctt tcgggcggtt tccgggggac
     1861 cccatcccct tcaga
//
LOCUS       DATAVD010001780         3658 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2402252, whole genome shotgun sequence.
ACCESSION   DATAVD010001780 DATAVD010000000
VERSION     DATAVD010001780.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3658
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2402252"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..684
                     /gene="lptD"
                     /locus_tag="VHX39_34010"
     CDS             <1..684
                     /gene="lptD"
                     /locus_tag="VHX39_34010"
                     /inference="COORDINATES: protein motif:HMM:NF016348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0010033 - response to organic substance
                     [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HEX3996213.1"
                     /translation="GFEFSDANLFGFNRFLGIDRLEGDSRLNAAMHGAWYLGGTVIDG
                     LVGQSYQVGTDNIFPEASGLRNTVSDIVARVSFSPTPWLNMTYRSRFDKDSFNTRLAD
                     GTISVGTDKFRLSGGYLYTTFNPYFFYDNPQPLPSTSQFFDPRNEASAAVSSRWGHYR
                     FSLSARRNLATNQMIYYAATAAYEDECFIFDIRFTRRFTTLAGDTDSTALLFFITFKT
                     IGQFGYRAM"
     gene            701..2134
                     /locus_tag="VHX39_34015"
     CDS             701..2134
                     /locus_tag="VHX39_34015"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX3996214.1"
                     /translation="MRNSKRTHTGMFARSRRGRPRTLGVAILGACLLLTVGAHAPLAQ
                     PQRQHGVPASPPGTAAPGTPGGGMGVVGTPLPGMRIVAVVSGDVITSGDVENRARLFA
                     LSTGLPTSQDVIDRLRTQIGNQLIDERLRLQEAQRRKVVVPDKDIASAMHDIEQRNNM
                     PEGVLRAKLASLGVSVRTLIDQIRVQLAWTQVLKDQLADKLNISDAEVDEQMHLHEAQ
                     LGKPEYHVGEIYIPVDDPANIADAQRFAETVIAELRSGAVFSAVAAQFSQTQSALEGG
                     ELGWVQPDQLDPQVAAVIVAMPIGAVSNPVKVPGGFDIVTLQGKRQVGNDMGTFVSLR
                     QVFLPFTVNLDPTHPTDQQRMQLDKAHTLSANIKSCAQMEEAAKVNPSPRAVDPGEIR
                     LETVNPPQFRDLLTKLPVGQASQPLVASDGIAVVIVCSKEQKNTAILTKDDVRRRMIT
                     DRVEMVSRQLMRDLRRKATIQRFDHAA"
     gene            complement(2145..>3658)
                     /gene="uvrC"
                     /locus_tag="VHX39_34020"
     CDS             complement(2145..>3658)
                     /gene="uvrC"
                     /locus_tag="VHX39_34020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEX3996215.1"
                     /translation="AKHRGARVRKGSYYGPFASAWAVNQTVTAMQRVFLLRSCADTVF
                     ANRTRPCLLYQIKRCSGPCVGRIDEGEYRKHVGQAKAFLAGKSGIVQQELASEMEHAA
                     DALEFERAAAVRDRIRALTFVQGNDVVNPASLEDADVIAAYQIAGQTCVQVFFVRGGR
                     NNGNRAFFPLHTRAEEAPEVLSAFIGQFYDDKPPPPLLLINHELAEQDLVAEALTLKA
                     GRKVEIHMPRRGEKHDVIQHAEINAREALERKLAESAGQAKLLEGVARLFGMDAPPER
                     IEVYDNSHIMGTNPYGVMIVSGPEGFIKAAYRKFGIRGAIAPGDDFAMMKEVLTRRFA
                     RGLKEQAEGAPASDWPDVVLIDGGAGQLSASRAVLDELGVSDVKLVAIAKGPDRDAGR
                     EWLHTDGMEAFQLPPRDPVLYFLQRIRDEAHRFAITTHRAGRSKAIRHSELDEVQGIG
                     AARKRALLNHFGSARGVKMAGLGDLEAAPGINKEIARRVYAHFHPGVRLEGVG"
BASE COUNT          677 a         1137 c         1138 g          706 t
ORIGIN      
        1 ggcttcgaat tttccgacgc caatctgttc gggttcaacc ggttcctggg gattgaccgg
       61 ctggagggcg actcccgact caatgccgcg atgcatggcg cctggtatct gggcggtacg
      121 gtcatcgatg ggctggtggg ccagtcttat caggtgggca cggataatat attcccggaa
      181 gcctcggggc tacgcaatac ggtatccgac atcgtcgcac gcgtgtcatt ttctcccacc
      241 ccatggctga acatgacgta ccgctcgcgg ttcgataaag acagcttcaa tacccgcctg
      301 gccgacggca caatttccgt cggcaccgac aaattccgtc tgtccggcgg ctatctttat
      361 accacgttca atccgtattt cttctatgac aatccgcaac cgttgccgtc gacgtcccag
      421 ttcttcgatc cgcgcaatga agcctcggcg gcggtctcca gccgttgggg gcattaccgg
      481 ttcagcctgt cggcgcggcg taacctggcg accaatcaga tgatctatta tgctgcgacc
      541 gccgcgtacg aggacgaatg cttcatcttc gacattcgct ttacccgccg attcacgacg
      601 ctggcgggcg acaccgattc taccgcgttg ctgttcttta ttacgttcaa gacgatcggc
      661 cagttcggtt accgcgcgat gtgaaacagg gataatgtca atgcgtaaca gtaaaaggac
      721 ccacaccggc atgttcgcca ggtcgcgccg cgggcgccca cggaccctgg gcgtggcgat
      781 cctgggggcg tgcctcctgc tgacggtcgg cgcgcatgcg cctctggcac aacctcagcg
      841 ccaacacggc gtgccggcat cgccgcctgg gacggccgcc ccggggacgc cgggtggggg
      901 gatgggggtg gttggaaccc cgctgccggg aatgcggatt gtcgccgtgg tcagtggcga
      961 cgtgatcacc agcggcgatg ttgagaatcg cgcacggttg tttgcgttat cgaccggact
     1021 gcccaccagc caggacgtga tcgaccggtt gcgcactcag atcggcaatc aactgatcga
     1081 tgagcgactg cgcctgcaag aggcgcagcg gcgcaaggtt gtcgtgccag acaaggacat
     1141 tgccagcgcc atgcatgaca tcgagcagcg caacaacatg ccggaaggtg tcctacgcgc
     1201 caagctcgcc tccctgggcg ttagcgtgcg cacgctgatt gaccaaattc gcgtacagtt
     1261 ggcatggact caggtgctga aggatcaact ggccgacaaa ctcaacattt cggacgccga
     1321 agtcgacgag cagatgcact tgcacgaggc gcagctcggt aagccggaat accacgtggg
     1381 cgagatttac attccggttg acgatcctgc gaacattgcc gatgcgcagc gatttgccga
     1441 gacggtgatc gccgagttac ggtccggtgc ggtgttctcg gcggttgccg cgcagttcag
     1501 ccagacccag agcgcgctgg agggcggtga gcttggctgg gtgcaacccg atcagctcga
     1561 cccgcaggtg gcggcggtga tcgtcgcgat gccgattgga gccgtcagca acccggtgaa
     1621 ggtgcccggc gggttcgata tcgtcacgct gcagggcaaa cgccaggtcg gcaacgacat
     1681 gggcacgttc gtttcgctgc gtcaggtgtt cctgccattc accgtcaacc tcgatccgac
     1741 gcacccgacc gatcaacagc gtatgcagtt ggacaaggcg cacaccttat cagccaacat
     1801 caaaagctgt gcgcaaatgg aggaggctgc gaaagtgaac ccgtcgcccc gggcggtcga
     1861 tcccggcgaa atccggctgg agacagtgaa cccgccacag tttcgcgatc tgttgaccaa
     1921 actgccggtt ggccaggcca gtcagccgct ggtggccagc gacggcatcg cggtcgttat
     1981 cgtgtgctcg aaggagcaga agaatactgc gatcctgacc aaggacgacg tccgccggcg
     2041 gatgattacc gaccgggtcg agatggtgtc gcggcaattg atgcgcgatt tgcggcggaa
     2101 ggcgacgatc cagcgcttcg atcacgcggc atagccagat tgggttagcc gactccctcc
     2161 agccgcaccc ccggatggaa atgcgcgtac acacggcggg cgatttcctt gttgatccca
     2221 ggggccgcct caaggtcgcc gaggcccgcc atctttaccc ctcgcgcgga accaaaatgg
     2281 ttcagcaacg cgcgcttacg ggctgcaccg atcccttgca cttcgtccag ttcgctatgc
     2341 cgtatcgctt tcgagcggcc cgcgcgatgc gtggtgatgg cgaagcgatg tgcctcgtca
     2401 cggatgcgtt gcaggaaata caataccgga tcacgtggcg gtaactgaaa cgcctccatg
     2461 ccgtcggtgt gcagccactc gcggccggca tcgcgatccg gtcctttggc gatcgccacc
     2521 agtttcacgt cggacacgcc aagttcgtca agcacggcgc gcgaggccga caactggccc
     2581 gcaccgccgt cgatcaacac gacgtccggc cagtccgacg ccggcgcgcc ctccgcttgt
     2641 tctttcaatc cgcgcgcgaa acggcgtgtc agcacctcct tcatcatggc aaagtcgtcg
     2701 cccggagcga tcgcgccacg tatgccgaat ttccggtacg ccgccttgat gaacccttcc
     2761 ggacccgaga cgatcatgac gccgtacggg ttggtgccca tgatgtgcga attgtcgtat
     2821 acctcgatcc gttccggtgg tgcatccatg ccgaacagcc gggcgacgcc ctccagcagc
     2881 ttcgcctggc ccgccgactc ggccaacttg cgttcgagcg cctcgcgcgc gttgatttcg
     2941 gcgtgctgga tgacatcgtg tttctcgccg cggcgcggca tatggatctc gaccttgcgg
     3001 ccggctttca acgtcagcgc ctcggccacc agatcctgtt ccgccaactc gtgattgatc
     3061 agcagcagtg gtggcggcgg cttgtcgtcg taaaactggc cgatgaaggc gctgagcact
     3121 tccggcgcct cttcggcgcg ggtgtgcagc ggaaagaacg cgcggttgcc gttgttgcgg
     3181 ccgcctcgca cgaagaacac ctgcacacag gtctggccgg cgatctgata cgcagcgatg
     3241 acgtcggcgt cctccaggct ggccggattg accacgtcgt tgccctgcac gaacgtcagc
     3301 gcccgaatgc ggtcgcggac cgcggcggcg cgttcgaatt ccagcgcgtc ggccgcatgt
     3361 tccatttcgc tggcgagttc ctgctgcacg ataccggact tgccggccag aaatgctttg
     3421 gcctggccga catgtttgcg gtattcgccc tcgtcgatac ggccgacgca ggggcccgag
     3481 cagcgtttga tttgatatag caaacatgga cgggtgcgat tggcgaacac ggtgtcggca
     3541 caggaccgca acaaaaatac ccgttgcatg gctgttacgg tctgattgac cgcccaggcg
     3601 gaggcgaagg gaccgtagta ggagcctttg cgaacgcggg cgcctcgatg tttggcga
//
LOCUS       DATAVD010001781         2478 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2031180, whole genome shotgun sequence.
ACCESSION   DATAVD010001781 DATAVD010000000
VERSION     DATAVD010001781.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2478
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2031180"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            332..1449
                     /locus_tag="VHX39_34025"
                     /pseudo
     CDS             332..1449
                     /locus_tag="VHX39_34025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612134.1"
                     /note="programmed frameshift; incomplete; partial in the
                     middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            1836..2093
                     /locus_tag="VHX39_34030"
     CDS             1836..2093
                     /locus_tag="VHX39_34030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996216.1"
                     /translation="MNNWHRNLLTGVDQTPDVPLEGALVVVEAAVDVPIPVRWMESVG
                     LDRSVQQRGIAVVALRKDAEMLLGHEGVRVCKPLTPRLVAA"
     gene            complement(2107..2247)
                     /locus_tag="VHX39_34035"
     CDS             complement(2107..2247)
                     /locus_tag="VHX39_34035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996217.1"
                     /translation="MGYIKNATGSFDGGLLVIAAVSLISGIATLCIHHDSELYRQPAF
                     AE"
     gene            complement(2259..>2478)
                     /locus_tag="VHX39_34040"
     CDS             complement(2259..>2478)
                     /locus_tag="VHX39_34040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996218.1"
                     /translation="RIVSANATTRHAESLSLLLYPATTCLAVAWLLSAVCRPRLDNAI
                     NCMGRLRRFDHDAFDIGQGILNPVTRAS"
BASE COUNT          519 a          676 c          806 g          477 t
ORIGIN      
        1 tccgccgcca gacgggcggc agcctcggat accgctagtc ccggccattt tccatcgagt
       61 tcagcaagca tgatagtctc acgtatggcg tgaaacgagg cctccgcatt gacccaactc
      121 aatgagcctg atcaggcggc cagccgagag catttttccg acgcgctgga tcgtttcgcg
      181 accaatatag cagatgatcg cgtccgtctc gatgcactga tcgacttcct cgggcgcaga
      241 ccgatcggtg cgatgaggtg gtccccggaa actggacagg cggctaagag agagtctctc
      301 ctgggaacgg ccggtaggcc gaaggtgaga catgaccaat actcggaaga aacacggtcc
      361 tgagttcaag gcgaaagtag cgctggcggc ggtgcgggag gaaggcacgg tggccgaact
      421 gtcgagccgg ttcggtgtgc atgcgagcca gatccacgcc tggaagaaga ctttgctcga
      481 gggaaccgct tcgttgttcg cgcgaagcca cgccggtgcg acaaaaggcg ccgcggccga
      541 cgaggcccaa cttgcgccgt tgtatgagaa aatcggccaa ctgacggtgg agcgggattt
      601 ttttcgcaaa cggtctgggc catgaaccgg gcggaccggc ttgcgctggt agaccatgac
      661 gaccccgctt tgccgatcgt cgcgcaatgc cgtctgctga aggtcgcgcg ttcgacgtta
      721 tactaccagc cggtcgcggt gagcgcggac gatctggcgg tgatgcggcg aatggatgag
      781 ctgtatctgg cgtatccgtt ctacggatca cggcggatgg tggcggtgtt gcgccgcgag
      841 gggtgggcgg taaaccgcaa gcgggcgcgg cggctgatgc gattgatggg tttgtgggcg
      901 atttatcaga aacccaacac cagtcggcag cacccggagc acaaggtgta cccttatctg
      961 ctacgcggcc tgaccatcga gcgggcgaac caggtttggt gcgccgacat cacttatatt
     1021 ccgatggcca aagggtttgt gtatctggtg gcggtgatgg actggttcag ccggcgggtt
     1081 ctggcgtggc gggtgtcgat caccatggag acggattttt gcgttgaggc gttgcgcgac
     1141 gcgatggaac ggttcggcca gccggacata ttcaacactg atcagggcgc gcaattcacc
     1201 agcgcggatt ttgtcggtga gctggccggg cgaaaggttc gaatcagcat ggatgggaga
     1261 ggccgttatc tggacaacat tttcatcgag cggctgtggc ggagcttgaa atatgaggag
     1321 gttttcatca aggcgtatgg cgcggtgatc gaggcgcgcc ggagcatcgg caaatggctt
     1381 gaattctaca acgacgagcg gccgcaccag gcactggact atcgcacgcc acgcgagatt
     1441 tttgagggcg aagcctgtga gcatgtggac aacgcttccg catcgctccg cgacacttcc
     1501 gcgttgccca catgctcaca ggcacatcgt caggaaaagg aagtaataat gtattgacca
     1561 gtataggaca gggtctatac tgaccctcag acatcccctc ggatcgggag gggcgttgga
     1621 acacggtggg actctctctt aagtcacccc ggttcctgtc caaccgatgg gggccacctc
     1681 accccggtat ccaggcaact cagcggttcg agtcgctgac gccacacgaa tcgccgtttg
     1741 tcgcgttgca ccaggtcact gggactaacg tattcaccag tgacgcttac cgggccaagg
     1801 ccggcccagg gggtaccggt gaatggcagg aacgcatgaa caattggcac agaaatctgc
     1861 tcaccggtgt cgatcaaacg ccggacgtgc cgctggaagg ggctctggtg gtcgtcgaag
     1921 ccgctgtcga cgtgccgatc ccggtgcggt ggatggaatc cgtcggcctc gaccgcagcg
     1981 tccagcagcg cgggatcgca gttgttgcgc tgcgtaaaga cgctgagatg ttgcttgggc
     2041 atgagggcgt cagggtgtgc aaacccctga cgccccgcct ggtagctgcc tgatccgggg
     2101 gtaaaattat tctgcgaatg ccggttggcg atagagttcc gaatcatggt ggatgcacaa
     2161 ggtggcaatg ccggagatca ggctgaccgc ggcgatcacc aataggccac catcaaaact
     2221 gccagtagca ttcttgatgt agcccatgat gaacggccct acgaagcccg agtaacaggg
     2281 ttgaggattc cttgaccgat atcaaatgca tcgtggtcga accggcgcag tctccccata
     2341 caattgattg cgttatccaa acgaggccga cacaccgcgc tgagcaacca cgcgaccgcc
     2401 aggcatgtcg tcgccgggta cagcagcaat gacagggatt ccgcatgccg ggtggtcgcg
     2461 ttggccgaaa cgatgcga
//
LOCUS       DATAVD010001782         3461 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2775510, whole genome shotgun sequence.
ACCESSION   DATAVD010001782 DATAVD010000000
VERSION     DATAVD010001782.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3461
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2775510"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(251..1081)
                     /locus_tag="VHX39_34045"
     CDS             complement(251..1081)
                     /locus_tag="VHX39_34045"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX3996219.1"
                     /translation="MTRLDHLQIRHDNPWPRIGWWSAAGLVGIAFVLGFVVLGRYQQN
                     GPTLDTWGAICRAIGITADTAPASEPQPPTRTPTELAWTSATLGRIDSGSQQHGAFIA
                     LNCGTCHGEQGVSPTSLVPTLAGMEAAAIYKQLNDYRSGKRLWGVMSAMAGALSDQDS
                     ADVAAWFAHRAPPGGAQSGHMQDDPTHRLVFAGDPGRGLPPCAGCHGPEAHKLGAPAL
                     QGQHAGYIERQLMAFAQGMRRNDINEQMRTISAQLTPDEMHAVAAFYGGDSTVTAARK
                     "
     gene            complement(1078..2721)
                     /locus_tag="VHX39_34050"
     CDS             complement(1078..2721)
                     /locus_tag="VHX39_34050"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEX3996220.1"
                     /translation="MHHSRRLALYHFWVAFATFLPAILLGAWQMLSRSPMVPPIENPG
                     NYYESVTLHGTAMAYVVTTFFAMGFGYAVTATSLGRPIRGMAAAWAGFWVCLAGTAMA
                     VAAIVSGEASVLYTFYPPLLASGWYYGGAFLLIGGSMIWVVVIVLNMALWKHDNPGVP
                     VPLPMFATTATALLWAWAASGVLIELVGILLPRAFGWTDLIDAALGRTLFSVTLHAIV
                     YFWLMPAYIAFYTLVPRAAGGRLYSDTMARLTFIMFLIFSLPVGMHHLFEDPEHGSGF
                     KYLQSFLTFLVVLPTLLTVFSICASLEIAGRVRGGLGLLGWIGALPWDEPMILAVGLS
                     LVMLGLGGFGGIINMSYAMNSMIHNTSWVTAHFHLIFGGAVVIMYFAIAYEMWPRMTG
                     RSLSSRRLARWQLWLWFWGMLITTIPWHITGLMGQPRRVAIFDYADPLIARMGPLVVV
                     SVIGGLILLVSAVLLIVILIRSHFSDRTIGEPLRYAVAVNPPVWVPPSLNGFALWNGI
                     VLVLMIAAYGYPIGQFFFLKQHSVPAIEVSSQSDPWRSR"
     gene            complement(2711..3298)
                     /locus_tag="VHX39_34055"
     CDS             complement(2711..3298)
                     /locus_tag="VHX39_34055"
                     /inference="COORDINATES: protein motif:HMM:NF012344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996221.1"
                     /translation="MAEPSSNPPPASLPDGIVPEHVIARTENLWLIVMVSMLVVMMAV
                     IVTTGILGALHPSSNVEVVDPLTLHLRGEFVESNLGTAIEPDGSVTVRLIAEQYEFVP
                     HCVLVPAATPVMFRLASADVIHGFLLPDTNVNAMVVPGFVTEVRTHFDAARDYDMPCH
                     EFCGYGHHAMWAHVNVVPKERFANLSPVERTSCAP"
BASE COUNT          780 a         1054 c         1051 g          576 t
ORIGIN      
        1 cgcgacaatc tcggacgaca gggcgcggct ggcggagccg gcgccgagga tgctggagtc
       61 aacgtgcaga agtcgcatgt tcgtggtcct ttgcggtggt ggtgagtgaa gtcggtgtcc
      121 aggcatcgat ttgaggacgg accgccgaac gtgccagcct gtatttctcg ataagttctt
      181 tgcgccaaaa ggtgaaatac ccggctcgtg caggttcgaa aattgcgtgt ccggattggg
      241 ccacgcgggc ttactttcgc gccgccgtta cagtgctgtc cccgccatag aaagcagcga
      301 cagcatgcat ctcgtcgggc gttaattgtg ccgagatcgt tcgcatttgc tcgttgatgt
      361 cattccgccg catgccttgt gcgaaagcca tcagttgccg ctcgatgtaa ccggcatgtt
      421 ggccttgcag ggccggcgct ccgagtttat gcgcctctgg gccatgacac ccggcacacg
      481 gcggaagccc acgtccggga tcgccggcga aaaccaggcg atgtgtcgga tcgtcctgca
      541 tgtgcccgga ctgcgcaccg cccggcggcg cgcgatgcgc aaaccatgcc gccacatcag
      601 cggagtcctg atcgctcaag gcaccggcca ttgcgctcat aacaccccaa aggcgtttgc
      661 ccgaccggta gtcgttaagt tgcttgtata tcgcagcggc ctccattccc gcgagggtcg
      721 gaacgagcga tgttggactg acaccttgct cgccatggca ggtaccacaa ttgagtgcga
      781 tgaaggcgcc gtgttgctgg ctgcccgaat cgatccgccc aagtgtggca ctggtccagg
      841 cgagttctgt cggtgtgcgt gtcggcggct gcggttcgct tgccggcgcg gtgtcggcgg
      901 taatgccgat cgcgcggcag atcgctcccc aggtatccag cgtaggaccg ttttgctggt
      961 atcgcccaag cacgacgaaa ccgaggacaa aagcaatccc gacaagtccc gctgccgacc
     1021 accaaccgat cctgggccac ggattatcgt gcctgatttg caagtggtcg agacgtgtca
     1081 tcgcgacctc caggggtccg actggctcga cacctcgatg gccggaaccg aatgctgttt
     1141 cagaaagaag aattgcccga ttggatagcc ataggccgcg atcatcagaa ccagcacgat
     1201 gccgttccaa agagcaaacc cattgagcga cggcggcacc cacaccggtg gattgaccgc
     1261 gacagcatag cgcaatggct ctcctatcgt ccggtcactg aaatgggagc ggatgagaat
     1321 gacaatcagc agcaccgccg acacgagcaa gatcagaccg ccgatcaccg aaacgaccac
     1381 cagcgggccc atgcgcgcga tcaaagggtc cgcgtaatcg aaaatcgcga cacgccgcgg
     1441 ctgtcccatc aggccggtga tgtgccacgg gatcgtcgtg atcaacatgc cccagaacca
     1501 gagccacaat tgccagcgcg ccagacgccg ggaggacaat gaccggccgg tcatccgcgg
     1561 ccacatctca tacgctatcg caaaatacat gatcactacg gcaccgccga agatcagatg
     1621 gaaatgcgcg gtgacccagg acgtgttgtg gatcatcgaa ttcatcgcgt agctcatgtt
     1681 gatgataccg ccgaacccgc cgagaccgag catcacaagc gacagtccga ccgccaaaat
     1741 catcggctcg tcccagggca gcgcgccgat ccagcccaga agcccgaggc cgcctcgaac
     1801 gcgcccggcg atctccaggc tggcacaaat cgaaaacacc gtaagcaacg tcggcagaac
     1861 gacaagaaac gtgaggaacg attggagata cttgaacccc gagccatgtt cgggatcttc
     1921 gaaaaggtgg tgcattccga ccggcaacga aaagatgaga aacatgatga acgtgagccg
     1981 cgccatcgtg tcactgtaga gccgcccgcc cgccgcacga ggcaccagcg tgtaaaaggc
     2041 gatataagcc ggcataagcc agaaatagac gatcgcgtgc agcgtaacgg aaaatagcgt
     2101 gcggccaagt gcggcatcga tcagatctgt ccagccgaat gcccgcggca aaaggatgcc
     2161 gacgagctcg atcagaacgc cggaggcagc ccatgcccac agcaacgcgg tcgcagtggt
     2221 ggcaaacatc ggcagcggca ccggaacacc agggttgtcg tgtttccaga gcgccatgtt
     2281 gagaacgatc accacgaccc agatcatcga gccgccgatc agcaggaatg ctccgccgta
     2341 ataccagccg ctggccagca ggggcggata gaacgtatag agcactgaag cctcgccgga
     2401 gacgatcgcc gcaacagcca tggcggtgcc ggcgaggcag acccaaaacc cggcccatgc
     2461 agctgccatg cctcgtatcg ggcggccaag ggacgtcgcg gtcacggcgt agccgaagcc
     2521 catggcgaag aacgtggtga ccacataggc catcgcggtg ccatgcaggg tcacggactc
     2581 gtaataattg ccggggtttt cgattggtgg aaccattggg ctgcggctca gcatttgcca
     2641 ggcacccagc agtatcgcgg gcaggaatgt ggcgaacgcc acccagaaat ggtacagcgc
     2701 caggcgcctg ctatggtgca caactcgtcc tttcgaccgg actaaggttc gcgaaccgct
     2761 ccttcggcac gacattcacg tgcgcccaca tcgcatgatg accgtatccg cagaactcat
     2821 ggcacggcat gtcgtaatcc cgcgcggcat cgaaatgcgt gcgcacttcg gtgacaaagc
     2881 ccggcaccac catggcgttc acgttggtat ccgggagcag gaagccatgg atcacatcgg
     2941 cactggcgag gcggaacatc accggcgtgg ctgcgggcac caggacgcaa tgcggcacga
     3001 actcatattg ctcggcgatc agccgcacgg tgaccgaacc gtcgggttca attgcggtgc
     3061 caagattgct ttcgacaaac tcgccgcgaa ggtgcagcgt cagagggtcg acgacctcga
     3121 cattactgga cgggtgcaat gcgccgagga tgcctgtcgt cacgatgacc gccatcatca
     3181 cgacgagcat cgagaccatg acgataagcc aaagattctc ggtgcgagcg atcacatgct
     3241 ccggaacgat gccgtcaggc aacgacgccg gcggcggatt tgaggacggt tcagccaatg
     3301 gtgcctcgtg gcagaaacaa gaggaagtag aatgccagcc agccggcgaa gagcagtccg
     3361 acggcgacac cggcgatgac aaatgccccg atcggtccgt tgcccagtgc ctgcacggcg
     3421 gtttggtgtt cgtccctcgg catcgggatc accccttcgg c
//
LOCUS       DATAVD010001783         1696 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3708484, whole genome shotgun sequence.
ACCESSION   DATAVD010001783 DATAVD010000000
VERSION     DATAVD010001783.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1696
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3708484"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            231..>1696
                     /locus_tag="VHX39_34060"
     CDS             231..>1696
                     /locus_tag="VHX39_34060"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HEX3996222.1"
                     /translation="MDDTRYKDPRLKWAQSAFMQPQVMVEDRYLYDPAAGRYTVDRLL
                     DDYKKRFGGVDAVLIWPTYPDMGIDARNQLDMLASMPGGVEGVKGMVADFHRRGVRVL
                     FPFMLWDHGTRDPGAPWPQAITRLMADVDADGMNGDTQQGVPLTFSTAAEQIGHPLAF
                     QPEQSFADEALSWNVMSWGQYTFGPVPKVDRYRWLEPRHMVNVSDRWARSKTDDLQYA
                     FFNGEGWESWENVWGIWNGITPRDGEATRRMATIERGVATFLISPDWQPFYPTRQAGV
                     FASRWPRDSQTVWIVVNRNEYDVDGDQLTVPAEPGMRWFDLYHGRELTAVVKDGKAVL
                     SFPIEGKGYGAVLAVSGKPDATIRTLLTTMKAMTAEPLAKFDDQWKPLPQTMTAIAAT
                     KAYAQAPEGMVQIPAGQFLFKVSGTEIEGGNNVGVDVAYPWEMQATRFHEHRLDIKSF
                     FIDRTPVTNRQFKAFLDATHYHPKDDANFLKDWVNGAYP"
BASE COUNT          320 a          545 c          548 g          283 t
ORIGIN      
        1 ttctgctggg cttgcttacc ctcgcgagtg cggagccagt caacgcccaa ccggtaacca
       61 tccaacccac cgtcccccgg tggccgccga cccaactcat gatcaacggc ccagattgcc
      121 tgagcttccc taggctgggg aaccaatgga aggcctgcaa tgacgcggcc tacaattctt
      181 ggctcgccga gatacaggac tggcggagcg aacagcgcgt tcgggcggga ttggacgaca
      241 cccgctacaa ggacccccgc ctgaaatggg cgcagagcgc gttcatgcag ccgcaggtga
      301 tggtggagga tcgttacctc tatgaccccg ccgccgggcg ctacacggtc gaccggttgc
      361 tggacgacta caagaagcgc ttcggcggcg tcgacgccgt gctgatctgg ccgacctatc
      421 ccgacatggg catcgacgcc cgcaaccagc tcgacatgct ggcgagcatg ccgggtgggg
      481 tcgagggggt caaaggcatg gtcgccgact tccatcgccg gggcgtgcgc gtgctgtttc
      541 ccttcatgtt gtgggaccac ggcacgcgtg atccgggcgc gccctggccg caggcgatca
      601 cgcgcttgat ggccgatgtc gacgccgacg ggatgaacgg cgatacccaa caaggcgtgc
      661 cgctgacgtt ctcgaccgcc gccgagcaga tcggccatcc gctggcgttc cagccggagc
      721 agtcgttcgc ggatgaagcg ctgtcctgga acgtcatgtc ctggggccag tacaccttcg
      781 gcccggtccc gaaggtggat cgctatcgct ggctcgaacc gaggcacatg gtcaatgttt
      841 cggaccgctg ggctcgctcc aagacggacg acctgcagta tgcctttttc aacggcgagg
      901 gctgggagtc ctgggagaac gtctggggca tatggaacgg gatcactccg cgggatggcg
      961 aagccacccg gcgtatggcc acgatcgaac gcggcgtggc gaccttcctg atcagcccag
     1021 attggcagcc gttctatccc acccggcagg cgggcgtgtt cgccagccga tggcccaggg
     1081 acagccagac cgtgtggatc gtggtcaacc gcaacgaata cgatgtcgac ggcgatcagc
     1141 tgacggtccc ggccgagccg ggcatgcgct ggttcgacct ctatcacgga cgcgaactga
     1201 ccgccgtggt caaggacggc aaggccgtct tgtccttccc gatcgaaggc aagggctatg
     1261 gtgcggtgct ggcggtgagc ggtaaacccg acgcgacgat ccgtacgctg ctgacgacca
     1321 tgaaggcgat gaccgccgaa ccgctggcga agttcgacga tcagtggaag ccgctgcctc
     1381 agaccatgac tgccatcgcc gccaccaagg cctatgccca ggcgcctgag ggcatggtgc
     1441 agatcccagc cggccaattc ctgttcaagg tctccgggac ggagatcgag ggcggcaaca
     1501 acgtcggcgt cgacgtcgcc tatccgtggg agatgcaggc cacgcggttc cacgagcacc
     1561 gcctggacat caagagcttc ttcatcgatc gcacgccggt gaccaaccgg cagttcaagg
     1621 ccttcctgga cgccacccac taccatccca aggatgatgc gaacttcctg aaggattggg
     1681 tgaacggggc ctatcc
//
LOCUS       DATAVD010001784         3233 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_916857, whole genome shotgun sequence.
ACCESSION   DATAVD010001784 DATAVD010000000
VERSION     DATAVD010001784.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3233
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_916857"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1299
                     /locus_tag="VHX39_34065"
     CDS             <1..1299
                     /locus_tag="VHX39_34065"
                     /inference="COORDINATES: protein motif:HMM:NF039910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX3996223.1"
                     /translation="AGGLPPTGEETTMMPVEDNELLVRVGPGTAMGNLFRRFWLPVML
                     TSEVAEPDGPPVRLRILGEDLVAFRDSDGRVGVLDAYCTHRRAHLFWGRNEECGLRCV
                     YHGWKFDVNGNCVDLPNAPNGDRIKANMKTRAFPTIERGGMVWAYFGPEELRPELPAA
                     EVFEAPDSHRHMVKLIAHGNYLQFAEGDIDSSHVSFLHSRLDGVALAGSRLNAFAFQD
                     RSPRWTVRPTDYGLMLAAQRDAGADKYSWRINQWLLPMATMVAAPHDSPFITNIRVPI
                     DDENSILFRVWTHPDRPLNEAERATANAGIIIPEMIPGTFEPVANRSNDYLIDRHDQK
                     HQTFTGIKAIPVQDLAVTQSQGPGPIADRSLEKLTMSDIAIVAMRKRLLDTAKALMNG
                     VEPPEASKPQSYRVRPIDTILPRDVAVEDATRPMTVRLVA"
     gene            1327..2148
                     /locus_tag="VHX39_34070"
     CDS             1327..2148
                     /locus_tag="VHX39_34070"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3996224.1"
                     /translation="MIQLAWIGLGRIGAPMALRLLAAGYRLNVFDVVPEAMDPLVAAG
                     ARAATSPGDAAAEAHVVCFCVSDGEAVERAAFGVDGVASRAPKGALLIDHSTTHPELT
                     RTISARAEAMGFCWVDAPISGGISAAKNGTLAAWLGGRREHADRAQTVVATYAGRINY
                     MGPSGNGQTAKSCNQVIVANTIAIWAEMLAYAAGNGLDLETLIDTLEGSGADSGVRRT
                     FAKGMANGTFPDLSTRNMIKDLGIIEDLANQAGVPMPISSIALERFKRGIARLGG"
     gene            complement(2278..2682)
                     /locus_tag="VHX39_34075"
     CDS             complement(2278..2682)
                     /locus_tag="VHX39_34075"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX3996225.1"
                     /translation="MKVQGACHCGAVAYEAEVDPDSVRICHCTDCQVSSGGSFRTNIV
                     AAGETFRVLRGSPKSYIKTAESGNQRAQVFCGECGTGMWSRAPDGTGPVVLRVGPISQ
                     RASFHPRTQIWCRSELPWTKEIGSAQRFDLQS"
     gene            complement(2751..>3233)
                     /locus_tag="VHX39_34080"
     CDS             complement(2751..>3233)
                     /locus_tag="VHX39_34080"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3996226.1"
                     /translation="AREMTSGQVRRAAMFTGVSSFQMGLIHILAAMMGAGVFERYPNL
                     RVSFGESGIGWIPYALDRMDFEFEDRFRDLMKLKPSEYWQRQCKATFQYDVIGPKLLG
                     VNNLMTVDSLMWGSDYPHTDGIWPESTKYIEEQFVGLSREDIHKITCENAAKFYNLTN
                     "
BASE COUNT          638 a         1030 c          957 g          608 t
ORIGIN      
        1 gccggaggac tgccaccaac tggcgaggaa accacaatga tgcccgttga agacaacgaa
       61 ctgttggttc gcgtcggacc agggaccgcc atgggcaatc tgttccgtcg gttctggctg
      121 cctgtcatgc tgacctccga ggtagcagaa cctgacggcc cacccgtcag gctgcggatc
      181 cttggcgaag accttgtcgc gttccgcgac agcgacggac gggtcggcgt tttggatgcc
      241 tattgcaccc atcgccgcgc gcacctgttc tggggccgca atgaggaatg tggcctccgc
      301 tgcgtctatc atggctggaa gttcgacgtt aacggcaatt gcgtcgattt gcccaatgcc
      361 cccaacgggg atcgcatcaa agccaatatg aaaacccgag cgtttccgac aatcgaacgc
      421 ggcggcatgg tctgggctta tttcggtccc gaggaactgc gccccgaact gcccgcagcc
      481 gaagtattcg aagcaccgga cagccatcgg catatggtca aattgatcgc acatggcaac
      541 tatctgcagt tcgccgaggg cgatatcgat tccagtcatg tgtcgttcct gcacagccgg
      601 ctggatggcg tggctctcgc ggggtcgcgg ttgaacgctt tcgcctttca ggatcgctcg
      661 ccccgttgga ccgtcaggcc gaccgactat ggccttatgc tcgccgcaca acgcgacgcc
      721 ggggcggaca agtattcctg gcggatcaat caatggctgc tgccgatggc gacgatggtg
      781 gcggcgccgc acgactcgcc gttcatcacc aatatccggg tgccgatcga tgatgagaat
      841 tccattttgt tccgcgtctg gacccatccc gaccggccgc tgaacgaggc cgaacgcgca
      901 accgccaacg ccggcatcat tatccccgaa atgattccgg gaacctttga gccggttgcg
      961 aaccgttcca atgactatct catcgatcgt cacgatcaga agcaccagac attcaccggc
     1021 atcaaagcga ttccggtgca ggaccttgcc gttacccagt cgcagggccc cggcccaatc
     1081 gcggaccgca gccttgagaa gttgacgatg tccgacatcg cgatcgtcgc catgcggaaa
     1141 cggctgttgg ataccgccaa agcgctgatg aacggcgttg aaccgccgga ggccagtaag
     1201 ccgcagtctt accgggtaag accgatcgat accattctgc cacgagacgt tgcggtcgag
     1261 gacgcgaccc ggccgatgac cgtcaggctc gtggcatagt cagccttcca tttgggagcc
     1321 agcaccatga tccaattggc ctggatcgga ctgggccgca tcggtgcacc aatggcgcta
     1381 cgtctgctcg cggcgggtta tcgtctgaat gtgttcgatg ttgtcccgga ggcaatggat
     1441 ccgctcgtgg ccgccggcgc acgggcggca acgtcacctg gcgatgcggc tgccgaagcc
     1501 cacgtggtgt gcttttgcgt gagcgacggt gaagcggtgg aacgtgccgc ctttggcgtc
     1561 gatggcgttg ccagtcgggc gcccaaaggt gcgctgctga tcgaccactc gacaacgcat
     1621 ccggaattga cccggacaat atcggcccgc gccgaagcaa tgggcttctg ctgggtcgat
     1681 gcgccgatct ccggcggcat ctcggccgcg aaaaacggca cgctcgcggc atggttgggc
     1741 gggcggcgcg agcacgccga cagagcgcag acggtcgttg cgacctatgc cgggcgcatc
     1801 aattacatgg gaccgtccgg caacggtcag accgcaaagt cgtgcaatca ggtcattgtt
     1861 gccaacacca tcgcgatctg ggctgagatg ttggcttacg ccgccggcaa tggtctcgat
     1921 cttgaaaccc tcatcgatac gctggagggc agcggcgccg attccggcgt gcggcgaacg
     1981 ttcgcgaagg gaatggccaa tggcacattt cccgatctgt cgacgcgcaa catgatcaag
     2041 gacctgggca ttatcgagga tctggcaaac caggccggtg tgccaatgcc gatttcttcg
     2101 attgcactgg agcgattcaa aagggggatt gcgcgcctgg gcggctaatt gatgggcgcc
     2161 gcctgggacc gctggtggcg tagtgagtac cgcggcccca ccatatgctg cctgaagatc
     2221 ggttccggat tcttcacatg cttgaggcgg cggatgcagc ccagagtgca gcgccggcta
     2281 gctctgcaga tcgaacctct gggcgctgcc aatctccttc gtccagggca attccgaacg
     2341 gcaccagatt tgcgtccgcg gatggaacga cgctcgttgc gaaatgggac cgacccgcag
     2401 aacgaccggc ccagtaccgt ccggcgcgcg cgaccacatc ccggttccgc attcgccgca
     2461 aaacacctga gcacgctggt tgccgctttc cgccgtcttg atgtagcttt tgggtgatcc
     2521 gcgcagtacc cggaacgttt cacctgccgc gacaatgttg gttcgaaacg agccgccact
     2581 gctgacctga cagtccgtgc agtggcaaat ccgcaccgag tcgggatcga cctcggcttc
     2641 gtacgccacc gctccgcaat gacatgcacc ctgaaccttc atcgccgcct ccttggcaaa
     2701 cgcaaacggc cgggaaccac ccggccgccg cacaacaaac ctcagaacaa tcagttcgtc
     2761 agattataga acttcgccgc attctcgcag gtgatcttgt ggatgtcctc gcgagacagc
     2821 ccaacgaact gctcctcgat atacttcgtc gattccggcc agatcccgtc cgtgtgcgga
     2881 taatccgagc cccacatcag cgaatccacc gtcatcaggt tgttcacgcc caacagcttc
     2941 ggcccgatca cgtcatactg gaacgtcgcc ttgcactggc gctgccagta ctcggacggc
     3001 ttcagcttca tcaaatcccg gaaccggtcc tcgaactcga agtccatacg gtcgagcgcg
     3061 taagggatcc agccgatgcc gctctcgccg aacgacaccc gcaggttcgg ataacgctcg
     3121 aacacgccgg cgcccatcat ggccgccagg atgtggatca gccccatctg gaacgacgac
     3181 acgccggtga acatcgccgc gcgccgcacc tggcccgagg tcatctcccg cgc
//
LOCUS       DATAVD010001785         2767 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3144062, whole genome shotgun sequence.
ACCESSION   DATAVD010001785 DATAVD010000000
VERSION     DATAVD010001785.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2767
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3144062"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..423
                     /locus_tag="VHX39_34085"
     CDS             <1..423
                     /locus_tag="VHX39_34085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012569176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbbX protein"
                     /protein_id="HEX3996227.1"
                     /translation="IEILLQVMEDNRDDLVVILAGYKDRMDTFFRSNPGMASRIAHHI
                     DFPDYDAGELFAIAELMAGSMHYRFDTDGTQALRDYIALRMQQPRFSNARSIRNGLDR
                     ARLRMANRLFARRDRPLSRLDLETITAEDIRASRVFSQ"
     gene            465..1541
                     /locus_tag="VHX39_34090"
     CDS             465..1541
                     /locus_tag="VHX39_34090"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012569177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HEX3996228.1"
                     /translation="MPYRRTTLSKFIIDDQRRAADPQPELTSLLNDIQTACKLIAIAA
                     SRGQLSTPGAMRTQVNPTGDQQKPLDVIANDIMLRTCEWGGQLAGMVSEEMAEPYCIP
                     ASYPRGRYLLVFDPLDGSSNIDVNVPVGTIFSVLRAPDGMERPTEADFLQPGTEQVAA
                     GYAIYGPVAMIVLTLGAGVHGFTLDREIGAFALTHPAMSIPPAAQEFAVNVSNERFWA
                     PPVRRYVDECIEGVAGPRGKEFNMRWIASMVAEVHRILLRGGLFMYPASSKDPAQPAR
                     LRLLYEANPMAMLVEQAGGRASTGLERLLDVIPTGIHQRIPVILGSRDEVDRLDRYHA
                     EYARGEESVFKAPLFNARSLFRTA"
     gene            1558..2427
                     /locus_tag="VHX39_34095"
     CDS             1558..2427
                     /locus_tag="VHX39_34095"
                     /EC_number="2.7.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014413513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008974 - phosphoribulokinase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribulokinase"
                     /protein_id="HEX3996229.1"
                     /translation="MSRKHPIISITGSSGAGTTTVTTTFEQIFRREKINAVIVEGDSF
                     HRYDRAAMRVLIEEAHAKGNAHVSHFGPEANLFAELETLFRTYGETGSGKSRKYLHND
                     EEAAPYKQPPGTFTPWEEIKGHSDLLFYEGLHGGLVDCDVNIARHADLLVGVVPIINL
                     EWIQKLHRDKKTRGYTHEAVVDTILRRMPDYVNYICPQFSQTHVNFQRVPTVDTSNPF
                     IARDVPSADESMLVIRFANPKGIDMPYLLSMLADSFMSRANTIVCPGSKMPLAMQLIF
                     TPMILQLMDRKSR"
BASE COUNT          547 a          864 c          819 g          537 t
ORIGIN      
        1 atcgagatcc tgctgcaggt gatggaggac aatcgcgacg acctcgtcgt gatcctcgcc
       61 gggtacaagg acagaatgga tactttcttc cgcagcaatc cgggcatggc ctcgcgcatc
      121 gcccatcaca tcgacttccc cgattacgac gccggcgaac tgttcgccat cgcggaactt
      181 atggccggca gcatgcacta tcgtttcgat accgacggca ctcaggcgtt gcgggattat
      241 atcgccctgc gcatgcagca gccgcgcttc tccaacgcca ggtcgatccg caatggtctg
      301 gaccgcgctc gcctgcgcat ggcaaaccgg ctgttcgcgc gacgcgatcg tccgctgtcc
      361 cggctcgacc tggaaaccat cacggccgaa gatatccgtg ccagccgggt gttctcgcag
      421 taaaggccac tgcgcccgtc tgcatgccga atgggaggta accgatgccg taccgccgga
      481 cgacattgtc gaagttcatt atcgacgatc agcggcgcgc cgccgatccg cagcccgaac
      541 tgacatcgct gctcaacgac atccagaccg catgcaagct gatcgcgatc gccgcgtccc
      601 gcgggcaact cagcacgccg ggtgccatgc ggacacaggt caatccgacc ggcgaccagc
      661 agaagccgct cgatgtgatc gccaacgaca tcatgctcag gacctgcgaa tggggcggcc
      721 agctcgccgg catggtttca gaggagatgg cggaaccgta ctgcatcccc gcatcctacc
      781 cgcgcggacg ttaccttctg gtgttcgacc cgctcgacgg ttcctcgaac atcgacgtca
      841 acgtgccggt cggcacgatc ttctcggtgc tgcgcgcgcc tgacggcatg gaacgcccga
      901 cagaggctga tttcctgcag cccggcaccg agcaggtggc agccggttat gcgatttatg
      961 gcccggtggc gatgatcgtg cttaccctcg gcgccggcgt gcacggcttc acgctggatc
     1021 gcgagattgg tgcattcgcc ttgacccatc ccgccatgag cattccgccg gcagcgcagg
     1081 aattcgccgt gaatgtgtcc aatgagcgct tttgggcgcc cccggtgcgg cggtacgtcg
     1141 acgagtgcat cgaaggcgtg gccggtccgc gcggcaagga attcaacatg cggtggatcg
     1201 catcgatggt cgccgaggtg caccggatcc tgttgcgcgg tggtctgttc atgtatccgg
     1261 ccagttcgaa ggatcccgcc caaccggcgc gcctgcggct gctttacgaa gccaatccga
     1321 tggcgatgct ggtcgaacag gccggtggac gtgcctcgac cggtctcgag cgtctgctgg
     1381 acgtgatccc gaccggcatc catcagcgta ttccggtcat cctggggtcc cgtgatgaag
     1441 tggaccgcct ggaccggtac catgccgaat atgcccgagg cgaggagagc gtgttcaaag
     1501 cgccgttgtt caacgcgcgc tcattgtttc gtaccgcctg aacccggagg accggctatg
     1561 tcgcgcaagc acccgatcat ctcgatcacc ggttcgtccg gtgcgggcac gaccactgtc
     1621 acgaccacgt tcgaacagat tttccgccgg gagaaaatca acgccgtcat cgtcgagggc
     1681 gactctttcc accgttatga ccgtgccgcg atgcgtgtct tgatcgaaga ggcgcatgcc
     1741 aagggcaacg cccatgtcag ccattttggg ccggaggcta atttgttcgc cgagcttgag
     1801 actctgtttc gtacatatgg cgagaccggg tcggggaaga gccggaaata tctccacaac
     1861 gacgaagagg cggccccgta caagcagcca cctggaacct tcaccccgtg ggaagaaatc
     1921 aaaggccaca gcgatctgct gttttacgag ggtctgcacg gcggcctggt cgactgtgac
     1981 gtcaacattg ccagacacgc cgatctgctg gtgggcgtcg tgcccatcat caatctggaa
     2041 tggattcaga aactgcatcg cgacaagaag acgcgcggct atacgcacga ggcggtggtc
     2101 gataccatcc tgcgccgcat gcctgactac gtgaactaca tctgtccaca gttcagccag
     2161 acccatgtga atttccagcg cgtgccgacc gtggacacgt ccaacccgtt tattgcgcgc
     2221 gacgtgccaa gtgccgatga aagcatgctg gtgatccgct tcgcaaatcc caagggcatc
     2281 gatatgccct atctgctgtc gatgctggcg gacagcttca tgtcacgtgc caacaccatc
     2341 gtttgccccg gcagcaagat gccgctggcg atgcaactga tctttacgcc gatgatcctg
     2401 caactgatgg accgcaagag ccgctgagcg cagagcttgg tgatggccca cggatgaagc
     2461 cggttgtgcc gtaagtggtg atgacggata gcgggacccg catgattgcg tcacctgtca
     2521 cggtccagca attctaaatc ctgtgtctga gcagattttg gcccaattat accaatcgcc
     2581 cttgatgttg acccatcggc accgccatgc aaccgtcatg gcgagcgccg gctcgccatc
     2641 catgcctttg tttccgctcg taaaaggcgt ggataccggc atgcgccggc atgacggacg
     2701 gggtcaaccg aagagtctgc atcaatgccg gttggtatca gcccacaaaa tcaaaggctg
     2761 gtagttc
//
LOCUS       DATAVD010001786         4826 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3708618, whole genome shotgun sequence.
ACCESSION   DATAVD010001786 DATAVD010000000
VERSION     DATAVD010001786.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4826
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3708618"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..380
                     /locus_tag="VHX39_34100"
     CDS             <1..380
                     /locus_tag="VHX39_34100"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX3996230.1"
                     /translation="YMCDQVVSVVPQAQAHTIRVYAVASRSRDRSLPDVPTAEQAGLP
                     QFDVSAWNGLFAPKDTPRPIIERLNTVLGTALADPTVRKALLDLGCEIPDPADRSPEA
                     LAALVKREVAKWISVLRPMEAKN"
     gene            578..2698
                     /locus_tag="VHX39_34105"
     CDS             578..2698
                     /locus_tag="VHX39_34105"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3996231.1"
                     /translation="MVGANVVVLRNLRETALHNAETDLARHTTMVAEQTERSFQSLDL
                     ILSRVGEYLGNKGINDSESYHRIAADHDTHLFLREKIIGMEQVDAVTLVDANARLLNF
                     SRYWPIPSVNVSDRDYYKALTADPNLESFVGEPVQNRGDGSWAIYLARRLDDPNGQFL
                     GMVLGTISLRYFENFFAATSLGLGSAVAVARQDGALIARYPPGDAHDHWSAAPIRRAL
                     AGGGIIRDRQHDGRMTVRSARILPNYGLWVTASLTERAALVGWRHTAALMMMMSAAFA
                     VVVLLAAFLVARWWQARERAAVAAQAASAAKSSFLAMMSHEIRTPMNGVLGLASTLLD
                     DDLRPQHRKVVEAIRDSGNDLLRILNDILDFSKLDASKMTFENVPFLPLALADGVVSI
                     LGVRAGGKGLRLVVESGSWLPPGLQGDAGRIRQVLINLVSNAIKFTASGQVTVRVDCI
                     SHDDATAAMEWTVSDTGIGIAVDRVGTLFGEFVQADNSISRRFGGTGLGLAISKRLVE
                     QMGGSISVTSAPGEGSTFRVHLTLPIVAAPVEEIRQMPGQPAAWDAIRAALGRSPRLL
                     FAEDNATNQFVARRMLRDLDIHLDMVANGSEAVEAASRIAYDVIFMDMQMPEMDGVTA
                     SRIIRSRGGALATVPIIALTANALPEDKQACLDAGMDQFLTKPVTREGMLNALLIALR
                     HDASAAAPEHDQVDRKSFAPSGVP"
     gene            3165..4736
                     /locus_tag="VHX39_34110"
     CDS             3165..4736
                     /locus_tag="VHX39_34110"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3996232.1"
                     /translation="MRRLCQTLALLILTTVVPAQAAELRLALAVEPDSIDPHVHNFGG
                     NKAFMPHLFETLTVIDANGQLAPGLATAWTLENDTVWDIMLRPDVTFSDGTPFTAEDV
                     AFTLQRVATMQTTAANFAEYVKSIAHVEITGPRQLRLTTNGPFPLLPDYLTAVGIVSR
                     AHGENAGTTDYNSGAAAIGTGPYRLISWARGDRLVMQRNDRYWGARPAWDTVTFRYVK
                     NASSRLATLLAGDADLIDTVAVQDIDRLRNDKRFSVIAALSADIVGFVFDQRDRPSPK
                     ITGNDGQPLEVNPFHDQRVRAAIDLAIDRDAIRDRVMNGQAAPDNQLMRPGQYGYDPA
                     LPPPRYDPIEAKRLLAEAGFPNGFHLTMDCQNDRFVNDAAICQAVAQMLTHIGIATSP
                     EVMPHAVWVPRANKHEFSLFTTFWTFDTPEPSVPLVSQFATPDPLHGKGAFNRSGYSN
                     PEFDAVLDTALRTMDRDQREKLLIQATDIEVRDHVTVPLHHQFNIEAMVKAIHHTPRI
                     DGYIRVVDLTPQKGP"
BASE COUNT          892 a         1517 c         1466 g          951 t
ORIGIN      
        1 actacatgtg cgatcaggtg gtttcggttg tgccacaggc ccaggcccac acgatccggg
       61 tctatgccgt cgcatcacga tcgcgggacc ggtctctgcc tgatgttccg actgccgaac
      121 aagctgggct gccgcaattc gatgtctcgg catggaacgg cctgtttgca ccgaaagaca
      181 cgccgcggcc gatcatcgag cggctgaata cggtcctcgg tacggcgctg gccgacccaa
      241 cggtccgcaa agccttgctc gaccttggct gcgagatacc ggatccggcg gaccgctccc
      301 cggaagcgct cgccgctttg gtcaaacggg aagtcgccaa atggatttcc gttctgcgac
      361 cgatggaggc gaagaattga ccccggcttc cgggccggac gcgcggcact ccctggttcc
      421 ggcggcggcc ggtgatcggc caccatcgca tgggcgcatt ggaccgggcc tggctacccg
      481 cacggtcctt gcctgtctgc ctcggctccg gcgggccgtc gggagctggc gggtcggtgc
      541 gatttcccta ttgggcgccg ttctggtgat cgcatgcatg gtcggtgcga acgttgttgt
      601 gctgcgcaat ttgcgtgaga ccgcgttgca taacgcagaa accgacctcg cgcgccacac
      661 caccatggtc gccgaacaga ccgagcggtc gtttcaatcg ctcgacctca tcttgtcgcg
      721 ggtcggcgaa taccttggca acaaagggat caatgacagc gaatcttatc atcgtattgc
      781 tgccgatcac gatacgcatt tgtttttgcg ggaaaagatc atcggcatgg aacaggtcga
      841 cgcagtcacc ctggttgacg ccaatgccag gttgctgaat ttctcccgct actggccgat
      901 cccatcggtc aacgtctcag accgtgatta ttacaaggcg ctgactgcgg atccgaacct
      961 ggagtccttc gtcggtgagc cggtgcaaaa tcgcggcgac ggcagttggg cgatttatct
     1021 cgcccgccgc ctcgacgatc cgaacgggca atttctgggc atggtgctcg gcacgatctc
     1081 attgcggtac ttcgagaact tctttgccgc aacctcgctt ggtctgggca gtgcagtcgc
     1141 ggttgcccgc caggacggtg ccctgattgc gcgctatcca cccggcgatg cgcatgacca
     1201 ttggagcgct gcgccaatcc ggcgcgcgct cgcgggcggc ggtattatcc gcgatcggca
     1261 gcacgatgga cggatgacgg tccgatcggc ccgcatattg ccgaattacg gattgtgggt
     1321 cacggcgagc ctgaccgaac gggccgctct ggtcggctgg cgccataccg cggcactgat
     1381 gatgatgatg tctgctgcgt ttgctgttgt cgtgctgctc gccgcgtttc tggtggcccg
     1441 ttggtggcag gcgcgggaac gggctgcagt tgccgcgcag gcggccagtg ctgcgaagtc
     1501 gtcctttctg gcgatgatga gccacgaaat tcgtactccg atgaacggcg tactgggcct
     1561 cgccagcact ttgctggatg acgatctgcg gccgcagcac cgcaaggtgg tcgaagcaat
     1621 ccgcgattcc ggcaacgatc tgctgcggat cctgaacgat attctggact tttcgaagct
     1681 cgatgccagt aagatgacgt ttgaaaacgt gccgttcctg cccttggcgc tcgccgatgg
     1741 cgtggtcagt atcctcggcg tccgagccgg gggcaaagga ctgcgtctgg tggtcgagag
     1801 cgggtcctgg ttgccgccgg gcttgcaggg cgacgccggg cgcattcgcc aggtgctgat
     1861 caatctcgtt tccaacgcca tcaagttcac tgcctccggc caggtgacgg tcagggtgga
     1921 ttgcatcagc cacgacgacg caacggcagc gatggagtgg accgtcagcg ataccggcat
     1981 cggcatcgca gtggatcgcg tcggcactct gttcggtgag ttcgtgcagg ccgataactc
     2041 gatctctcgc cggttcggcg gcaccggttt ggggttggcg atcagcaaac ggttggtcga
     2101 gcagatgggc ggctcgatca gcgtgacatc agcgcctggc gagggcagca ccttccgggt
     2161 ccacctgaca ttgccgatcg tcgcggcacc agtcgaggaa atacggcaaa tgccgggcca
     2221 gcccgccgcc tgggacgcca tacgggcagc gcttggccgt agccctcggc tgctgtttgc
     2281 cgaagacaac gccaccaacc aatttgtcgc ccgccggatg ttgcgcgatc tggatattca
     2341 cctggacatg gtcgccaacg ggtcagaggc agtcgaggcc gcgtctcgta tcgcctacga
     2401 cgtgatcttc atggacatgc aaatgccgga aatggatggc gtgacggcat cccgcatcat
     2461 ccgctcccgt ggcggcgcgc tggcgacggt gcccatcatc gctctgacgg ccaatgcgct
     2521 gccggaggat aaacaagcct gtcttgatgc cggtatggac cagttcctga cgaaaccggt
     2581 cacccgcgaa gggatgttga acgcgttgct gattgcgctg cggcatgatg catctgcggc
     2641 agcgccagag catgatcagg ttgaccggaa atcattcgcg ccgtctggtg tcccttgaga
     2701 attccgctgt cttcgcgggc gatcaacaaa gctggaccgc agagccgcaa ggttcatcgc
     2761 attgaccagt cggcggagca gaccaggcga agaaataatt cttgaataat gcttgctttt
     2821 cacacactca ggatttcagg taagagcacc gtgctctccg cggcctctgc gtctctgcgg
     2881 ttcagctttg ctcaccacgc gccatgacag cgacaatcgg gtatgcggcc aggcggtgtg
     2941 gagcatttcc ggtcagcctg aaggcgctcc aggcaatgca aactgttttg atggtgtatc
     3001 gtcgtactga ttaaagcgat tggcttacca tcgggctcat caccactgca ctgaccacag
     3061 gtcgacacct ccggcacccg gagatcgaag ggattttcgc ctccccgttt gactttgctg
     3121 catcgcacaa tgcaccctcc cctatcggtg cctggaggtg cgacgtgcga cgactgtgcc
     3181 agactttggc tttgctgatc ctgaccaccg tggttccggc ccaggctgcc gaactgaggc
     3241 tggcgctggc ggtcgagccg gactccatcg acccccatgt gcacaacttc ggcggcaaca
     3301 aagccttcat gccgcatttg tttgagaccc tgacggtgat cgacgccaac ggacagctcg
     3361 cacccgggtt ggccaccgcc tggacgctgg agaatgatac cgtctgggac atcatgctgc
     3421 gtccggatgt cacgttctcc gacggcacgc cgttcaccgc cgaggatgtc gccttcacat
     3481 tgcagcgcgt ggccaccatg cagaccacag cagccaactt tgccgaatat gtgaaaagca
     3541 tcgcccacgt ggagattacc ggaccgcgac aactgcggct gaccaccaac ggcccattcc
     3601 cgctgctgcc ggattatctg accgcggtcg ggatcgtgtc ccgcgcgcat ggcgaaaacg
     3661 cgggcaccac cgactacaat tccggcgccg ccgctatcgg caccggtccg taccgcctca
     3721 tctcctgggc gcgcggcgac cggctggtga tgcagcgcaa cgatcgttac tggggcgcca
     3781 ggccggcgtg ggacacggtc acatttcgtt acgtgaagaa cgcgtcatcg cgtctggcaa
     3841 cgttactggc cggcgatgcc gatctgatcg acaccgttgc agtgcaggat atcgaccgct
     3901 tgcgcaatga caaacgtttc tctgtcatcg ccgccctgtc ggccgatatc gtcggtttcg
     3961 tgttcgatca gcgcgaccgg ccatcgccga agatcaccgg caacgatggc cagccgctcg
     4021 aggtgaaccc gtttcacgac caacgcgtgc gcgccgcaat cgacctggcg atcgatcgcg
     4081 atgccattcg cgatcgcgtg atgaacggtc aggctgcccc cgacaatcaa ctgatgcggc
     4141 ccggccaata tggttacgat cccgcgctgc ctccgccgcg ctacgatccg atcgaggcga
     4201 aacgtctgct ggccgaagcg ggctttccca acgggttcca cctgaccatg gattgccaga
     4261 acgatcgttt cgtcaacgac gcggcaatct gccaggcggt cgcgcaaatg ttgacccata
     4321 tcggcattgc cacctcgccc gaggtcatgc cgcatgccgt ctgggtgccg cgcgccaaca
     4381 agcacgaatt cagtttgttc acaacgttct ggaccttcga cacgcccgag ccgagcgtcc
     4441 cgctggtcag ccagttcgcc accccggatc cgctgcatgg caagggcgcc ttcaaccgca
     4501 gcggttacag caatccggaa ttcgatgcgg tcctggatac agcgctgcgc accatggatc
     4561 gcgaccagcg cgagaaacta ctgatccagg cgaccgacat cgaagtccgc gaccatgtca
     4621 ccgtgccgct gcaccaccag ttcaacatcg aggcgatggt gaaggcgatt catcacacgc
     4681 cacgcatcga cggctatatc cgtgtcgtcg atctcacgcc gcagaaagga ccgtagaaat
     4741 ggccgacacg taccgcatgc caacgcacca cccacgcgtc atcgggacgc ggcatatggt
     4801 tgcgtccgcc aactatttgg cggctc
//
LOCUS       DATAVD010001787         2850 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1469119, whole genome shotgun sequence.
ACCESSION   DATAVD010001787 DATAVD010000000
VERSION     DATAVD010001787.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2850
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1469119"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..228
                     /locus_tag="VHX39_34115"
     CDS             <1..228
                     /locus_tag="VHX39_34115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996233.1"
                     /translation="QEPNDGKDFAVTQANMFLDGFSFRQFVEDCYRENARRMSVFDPD
                     LMQPRLLPGIADLAVRGLRLWDRRPRLRRAA"
     gene            477..896
                     /locus_tag="VHX39_34120"
     CDS             477..896
                     /locus_tag="VHX39_34120"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HEX3996234.1"
                     /translation="MGLTVCAAARARILGLACATLLIAAAPNVHHVDWSKAERIDVSM
                     VEYHFIPDHLTFRRGIPYRLHLENHGKELHEFTAPEFFAAVTAHNPRVLWTGGHEVVV
                     QPGANADVYLVPQRPGHYDLICADHDWAGMTGEIIVQ"
     gene            complement(927..1259)
                     /locus_tag="VHX39_34125"
     CDS             complement(927..1259)
                     /locus_tag="VHX39_34125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX3996235.1"
                     /translation="MSRWISRSTFGEIVPQPCRPSGIFRARVGEWPSGVELGAEFLWL
                     ETLSATGRADTREFLEWRLRHGLSLTKTADALGLSRRMVAYYSNGEKPVPKPVLLACK
                     GWQVDHAV"
     gene            complement(1373..1882)
                     /locus_tag="VHX39_34130"
     CDS             complement(1373..1882)
                     /locus_tag="VHX39_34130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996236.1"
                     /translation="MSGTIVVVNDTMQRGYRYARVAPPGGDFDPGFSPDLTPAEMLAL
                     GVFCGKYMTDCRAEFPADWFFAAKLSPERRNCALNYFGVDASQPLSTWRAKGWIHPDD
                     PRGWFQWYCRYYIGRRMPEEDQRQIKRWRAIRRHVRQIELNCERGNLTCRPRQRQALL
                     HWAYDSRVI"
     gene            complement(1879..>2850)
                     /locus_tag="VHX39_34135"
     CDS             complement(1879..>2850)
                     /locus_tag="VHX39_34135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3996237.1"
                     /translation="FGAVCLGVGYVLAAMASTLGQFALAYGLLIGMCGSASTFVPLMA
                     DISKWFERRRGIAVALCASGNYIAGAFWPPLVEHLIQTAGWRSAHIWIGVACVVLMLP
                     LTLLLRAPAPVHPAHATSMPARFPRVANLGPGTLQALLAIAGLACCVAMSMPQVHIVA
                     YCGDLGYGVANGARMLSLMMACGIISRIASGFIADRLGGMATLAIGSAAQMTALSLYL
                     TSDGLVSLYVISAMFGLFQGGLVPSYAIVIRENFPASQAGTRVGFVMMMTLLGMALGG
                     WMSGAIFDVTGSYRAAFANGVAWNALNLAIAMFLLSRGRGRSALRAA"
BASE COUNT          594 a          981 c          797 g          478 t
ORIGIN      
        1 caggagccga acgacggcaa ggatttcgcc gtcacgcagg ccaatatgtt tctcgacggc
       61 ttcagcttcc ggcaattcgt cgaggattgt taccgagaga atgcccggcg catgagtgtc
      121 ttcgaccctg atctcatgca gccgcggctg ttgccgggca tcgctgacct ggcggtccgc
      181 ggtcttcggc tgtgggaccg ccggccacgg ctccggcgcg cggcctgacc attctggggt
      241 tccagccctg atgggggcga cttaggttcc aatgactgtc aacattgcca accctcacga
      301 tcgccgaaac cgaggtcacg caaagccgtg aacggcagaa ccggaccaca tccgacctgc
      361 tcggccactg caccatgtgc aaagccatga tattacggga tcggccacga tgcatgtgcc
      421 accggcgacc cataattgag ccgttccgct caacctatcc gcatcaggag gatccgttgg
      481 gcctgacagt ttgcgccgcc gctcgcgctc ggatcctggg cctcgcatgt gccacgttgc
      541 tgatcgcggc cgcacccaac gtgcaccatg tcgactggtc caaagccgaa cggatcgatg
      601 tcagcatggt cgaatatcat ttcatacctg accacctgac ctttcgccgc ggcatcccct
      661 atcggctgca cctggaaaac cacggcaagg aactgcatga gttcaccgcg ccggagttct
      721 tcgcggcggt aacagcgcat aatcctcgcg tgctctggac tggcggccac gaggtcgtgg
      781 tacaaccggg tgccaacgcc gatgtctacc tcgttccaca gcggcccggg cactacgacc
      841 tcatctgtgc cgatcatgac tgggccggaa tgaccggcga gatcatcgtg cagtgaccgg
      901 ggcggcacat ctccgtaacg tcgatgttat acggcgtgat cgacttgcca gcctttgcag
      961 gcaagcaaaa cgggtttcgg cacgggcttc tcgccgttcg agtaataagc gaccatccgg
     1021 cgcgacaggc ccaacgcatc cgctgttttc gtcagcgaca ggccatgccg gagccgccat
     1081 tccaggaatt cgcgtgtgtc ggctcgaccg gtcgctgaca gggtctccag ccacaggaat
     1141 tcagcaccga gttcgacgcc cgatggccac tccccgacgc gcgcccggaa aatgccgctg
     1201 ggtcgacaag gctgcggaac gatttccccg aaggtgcttc gcgagatcca gcgtgacacg
     1261 gatcccgttg gaccattccg gttccagcaa cgccggcggt gtggcgattg cggtcaggat
     1321 cgtgtgcgtc ttgccggcac tcatcaccgg ttcaactccc gccacctgac catcagatca
     1381 cccggctgtc ataagcccag tgtagtaacg cctgacgctg cctcgggcgg caggtcagat
     1441 tgcctcgctc gcagttcagt tcgatctgcc gcacgtgccg ccggatcgcc cgccaacgct
     1501 tgatctgacg ctgatcttcc tccggcatgc ggcggcctat gtaatagcgg caataccact
     1561 ggaaccaacc gcgaggatca tccggatgga tccagccctt cgcgcgccat gtcgacaatg
     1621 gctggctcgc atcgacgccg aaataattca gtgcacaatt ccgacgttcc ggggaaagtt
     1681 tcgcggcaaa gaaccaatcg gccggaaact cggcccggca atccgtcatg tatttgccgc
     1741 agaacacacc cagcgcgagc atctccgctg gcgtcaggtc agggctgaac cccggatcga
     1801 aatcgccccc gggcggtgcc acccgcgcgt aacgataacc acgctgcatc gtgtcgttga
     1861 cgacgacgat cgttccgctc acgctgcccg cagcgcgctt cggccgcgtc cccggctcag
     1921 caggaacatc gcaatcgcca ggttcagcgc gttccacgcc acgccgttgg cgaaggcagc
     1981 ccgatacgac ccggtaacgt cgaaaatcgc ccccgacatc cagccgccaa gcgccatccc
     2041 caacagcgtc atcatcatga cgaacccgac ccgagtgccc gcctggctcg ccggaaagtt
     2101 ctcccggatc acaatcgcat aacttggcac cagcccaccc tggaacaatc cgaacatggc
     2161 cgagatcacg taaagcgaca ccaacccatc gctggtcaaa tacaaactca gcgcggtcat
     2221 ttgcgccgcc gagccgattg ccaaggtggc catgccgccc agtcgatcgg cgatgaaacc
     2281 ggaggcgatg cggctgatga tgccgcaagc catcatcagc gacagcattc gggctccgtt
     2341 ggcgacgccg taccccaggt cgccgcaata ggcgacgata tgcacctgcg gcatcgacat
     2401 cgccacgcag cacgccagac ccgcgatcgc cagcagcgcc tgcaatgtcc ccggacccaa
     2461 attggcaacg cgcggaaatc gtgctggcat cgatgtggca tgcgccgggt gcaccggagc
     2521 aggcgctcgc agcaacaacg tcagcggcag catcagcacc acgcacgcca caccgatcca
     2581 gatatgggcc gaacgccagc cggcagtttg gatcagatgt tccaccagcg gcggccagaa
     2641 cgctcccgca atgtaattgc cggacgcaca cagcgcgacg gcgatccctc ggcgacgctc
     2701 aaaccatttc gaaatgtccg ccatcaacgg cacaaaggtc gaggcactgc cgcacatgcc
     2761 gatcaacaac ccgtacgcca gagcaaactg ccccagggtg ctcgccattg ccgccaacac
     2821 ataacccacg cccaaacaca cggccccgaa
//
LOCUS       DATAVD010001788         2494 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1843503, whole genome shotgun sequence.
ACCESSION   DATAVD010001788 DATAVD010000000
VERSION     DATAVD010001788.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2494
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1843503"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..327)
                     /locus_tag="VHX39_34140"
     CDS             complement(<1..327)
                     /locus_tag="VHX39_34140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HEX3996238.1"
                     /translation="MKQLTSLKATLAALEPAKLAGLAVAALAVLALVGWIATHSAEPM
                     GLLYSGLDPAEAGRIGQRLDEMKVPYENRGDGTTIMVPASQVGRVRMDLAASGMPRQG
                     GSGYELL"
     gene            556..1071
                     /locus_tag="VHX39_34145"
     CDS             556..1071
                     /locus_tag="VHX39_34145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated FliL family
                     protein"
                     /protein_id="HEX3996239.1"
                     /translation="MSESKPQSGEPHDPPAPRKRRGKKKFLLLGMVVLLGGGAGAAWQ
                     FVPGVADKARSLIGQHEQTALAAASSKPVFIDLPEMALTLPNGGRPRQMRIKLSVELA
                     NGASEQQATDALSPRVYDALLTYLRTLQDGEVDGGLGLDRLRADLYRRLELVVGPGVL
                     KDVLITSLVMA"
     gene            1076..2068
                     /locus_tag="VHX39_34150"
     CDS             1076..2068
                     /locus_tag="VHX39_34150"
                     /inference="COORDINATES: protein motif:HMM:NF014235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliM/FliN family flagellar motor switch protein"
                     /protein_id="HEX3996240.1"
                     /translation="MSDAVSPTATDFDPPANVSPSDASHAPGLPVRRGLRALVGDGSV
                     NQPRLPMLAGIVDRLAGSIAINFRTLSRGSADARTEQPRPTRFAEYMETVPAAALVAV
                     FRIGTWGGNCLAVIDGELANIAIALLLGGQGGVAATAPLRGYTAIERAVVERLARDQI
                     AGSVASAFAPAAELDVALDHVATDPAEAAIANPPAPCLVWRISVTVEGREGSITFLLP
                     YAAIEPIRPQLSRDPAGSGRDRDAAWRSHLEAELPHTDVTLRAVIERRRISATEVLRW
                     RIGSAVLLNRRHDDPIDVFCDDLLVLRARMAEHDGRIALHVEERRLAEDWPEQT"
     gene            2111..>2494
                     /locus_tag="VHX39_34155"
     CDS             2111..>2494
                     /locus_tag="VHX39_34155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996241.1"
                     /translation="MLEAILNLAGLVLMITVACHTIVLHRRLTRLRSALAEAGTVLPS
                     LDASVDRMSEVVNGFAQRLQTDLSAVEARLASARRVATELASVNRTAEEASVNLDRLL
                     RQHRRMEDGRPTPIPREFVEPKGFAE"
BASE COUNT          435 a          804 c          812 g          443 t
ORIGIN      
        1 gagcagttcg taaccggaac cgccctgcct cggcatgccc gaggcggcga gatccatccg
       61 cacgcggccg acctgcgagg ccggcaccat aatggttgta ccgtcgccgc ggttctcgta
      121 gggcactttc atttcgtcga ggcgctgacc gatgcggccg gcctcggcgg ggtcaaggcc
      181 ggaatacagc agccccatcg gctcggccga atgtgtggcg atccagccaa ccagggccag
      241 gacagccaag gcggcaaccg cgagaccggc gagtttcgca ggctccagtg ccgccagagt
      301 cgccttaagg ctggtcagtt gcttcatcag ccgcctttat atgccccgcc gtttctggcg
      361 gaccccaacc cacggaggat ctgaacgtcc aggctcctcc tccgacacga aatttcgcag
      421 aacttttttc tggtgttatt tcgcaaagat gcttataacg agcgccgcgg cggttgtctt
      481 gcgaaaaatg catgatggca aattttcgca gagggcgagg ccgccgaagg aacgaggcac
      541 agaaaggccc cgcggatgag cgagagtaag ccgcaaagcg gcgaacccca tgatcccccc
      601 gcgccacgca agcggcgtgg caagaaaaag tttctgctgc tcggtatggt ggtcctgctt
      661 ggcggcgggg ccggcgcagc atggcaattt gtccccggag tggccgacaa agcgcgcagc
      721 ctgatcgggc aacacgagca gacggccctg gccgctgcca gcagcaagcc ggtgttcatc
      781 gacctgccgg aaatggcgct gactttgccg aatggcggtc gcccgcggca gatgcgcatc
      841 aaattgtcgg tcgaactggc caacggcgcg tcggagcaac aagccacgga cgcgctgtcg
      901 ccgcgcgttt atgacgcgct gctgacctat ctgcgaacct tgcaagacgg cgaagtcgac
      961 ggcggcctgg gattggatcg cctgcgcgcc gatttgtatc gccgtctgga gctcgtcgtt
     1021 gggcccggcg tgctgaagga tgtcctgata accagccttg ttatggcgta acgagatgag
     1081 cgatgcagta tcaccaacag caaccgattt tgacccgcct gccaatgtct cgccatctga
     1141 tgcaagccat gctcctggcc tgcctgtccg ccgcgggctg cgggctttgg ttggcgacgg
     1201 ctccgtcaat cagccccgcc tgccaatgtt ggccgggatc gtcgaccggt tggccggatc
     1261 catcgcgata aattttcgca cactcagccg cggcagtgcc gacgcccgaa ccgagcagcc
     1321 gcgcccaacc cgcttcgccg aatacatgga gaccgtgccg gcggcagcgc tcgttgcggt
     1381 tttccggatt ggcacctggg gtggcaattg cctcgccgtg attgatggcg agctggccaa
     1441 tatcgccatc gccctgcttc tgggcggaca gggtggcgta gcggcaacgg cgccgctccg
     1501 cggttatacc gcgatcgaac gggcggtcgt ggagcgcctc gcccgtgacc agattgccgg
     1561 cagcgtggca agcgcgttcg cgccggccgc cgaactcgat gtcgctctgg atcatgtggc
     1621 aacagaccct gccgaagcag cgatcgccaa cccgccggcc ccctgcctcg tctggcgcat
     1681 ttcggtgacc gtcgagggtc gggagggttc gatcacgttc ttgttgccgt atgccgcgat
     1741 cgaaccgatc cggccgcaac tctcccgcga tccggccggc tccgggcgag accgcgatgc
     1801 cgcctggcgc agccatctcg aggcggaact gccgcacacc gatgtgacgc tgcgtgcggt
     1861 catcgagcgc cgccggattt ccgcgaccga agtgctgcgt tggcgcattg gctcagccgt
     1921 actgctgaac cgccggcatg acgatccgat cgacgtgttc tgcgacgatc tgctggtgtt
     1981 gcgtgcccgc atggcggagc atgacggccg cattgccctg catgtcgaag aacgccgtct
     2041 ggccgaggac tggcccgaac aaacctgacc agtttgaccg attacgaacc gcctctcgga
     2101 gaaccgaaac atgctcgaag cgatcctcaa cctggccggc ctggtgctga tgatcaccgt
     2161 ggcctgtcac accatcgttt tgcaccgacg gctgacgcgg ctccgcagcg cgctggcgga
     2221 ggccgggacc gtgctgccgt cgctggatgc ttcggtggat cggatgtccg aggtcgtcaa
     2281 cgggtttgcg cagcggttgc agaccgacct aagcgcggtg gaggcacgtc ttgcctcggc
     2341 gcggcgggtc gccactgagc tggcctcggt taaccgtacg gcggaggagg cgtcggtcaa
     2401 tctcgaccgc ctgctgcggc aacaccggcg gatggaagat gggcgcccga ccccgatccc
     2461 acgtgagttc gtcgagccga aagggttcgc cgag
//
LOCUS       DATAVD010001789         3425 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2963149, whole genome shotgun sequence.
ACCESSION   DATAVD010001789 DATAVD010000000
VERSION     DATAVD010001789.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3425
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2963149"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1259)
                     /locus_tag="VHX39_34160"
     CDS             complement(<1..1259)
                     /locus_tag="VHX39_34160"
                     /inference="COORDINATES: protein motif:HMM:NF013225.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEX3996242.1"
                     /translation="MNDSIHTSKPVQVGWEPELAELRQRQALAREMGGKERVARQHKG
                     GRLTVRERIDHLLDPGTFKEIGSIAGKATYDGRGNIIDFMPGNCVFGRGMVDGRPVVV
                     AGDDFTLRGGSADASIKGKPKMSEQIAAQFRMPIIRLIEGSGGGGSVKTIETTGRANL
                     PGGLSETTAFDLVADNMAEVPVVGLGLGSVAGLGAARLVAAHYSVMVKEIAAVFVAGP
                     PVVERLGEPRTKQELGGWEIQLGCGAVDEAVDSEDDAFEMARRFLSYLPGSIHDVPPR
                     AKGWDDPARTDDQLVSVIPRNKKQAYLMRRIIGSVFDKDSFFEMGRMFGRSIITGFAR
                     LDGWPVAVMAGDPLFEGGAWNADACHKIIRFVDTAQTFHLPIVHLVDCPGFQVGLRAE
                     SSAVIRWGVRALAAINQTTVPWCSIVVR"
     gene            1450..2511
                     /locus_tag="VHX39_34165"
     CDS             1450..2511
                     /locus_tag="VHX39_34165"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3996243.1"
                     /translation="MTTADERSESLRMIRDSAAGLAPRTSDLRRIRALRFTEPGFDRA
                     VWQQMCEMGWPGLLISEQLGGSGLGVHEFCALTEELGASLMPEPLIPAAFAAMLLPDD
                     HLGPVLSGARIVLPAWQEQPHSISVSGSCALSDGRLNGRKMFVSMASGADAFLVTVKG
                     GLALVERDAPGVHVVSTPAQDGGNFATVTFDAAPALALPGDASEALEIAALATSAYLL
                     GCMDRVFGITLEYLKTREQFGKKIGSFQALQHRSADLQIQLALTRAVVEAAARTMDSA
                     KDPRVRQAAVSRAKARASEAASIMTRGCIQLHGGIGYTDAADPGLFLRKMMVLAPMFG
                     SAALHRARYQTVAPDLDEE"
     gene            complement(2650..>3425)
                     /locus_tag="VHX39_34170"
     CDS             complement(2650..>3425)
                     /locus_tag="VHX39_34170"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HEX3996244.1"
                     /translation="PFHMWTPDVYEGAPTPVTLFFATGPKVAAMALLLRVMGTSFAEL
                     VPAWQSLIVLMAIASMLLGSFAAIGPRNIKRLMAYSSIGHMGYALIGLSVGSSDGVRG
                     VLVYMTVYVLMTSGAIACIMAMKRNGQPVEQIADLSGLATTDPGLALAFSVFMFSLAG
                     IPLMAGFFAKLYIFLAAVKGGLYALAVIGVLTSVVGAFYYIRVVKVMYFDPPAEALDR
                     RPPALSFVVAATGLFTAFFFLFPAPVVDAAELASRVLFR"
BASE COUNT          679 a         1045 c         1080 g          621 t
ORIGIN      
        1 cgcaccacga tcgagcacca cggcaccgtc gtttgattga tcgcggccag agctcgcaca
       61 ccccacctta tcactgcgct gctctccgcc cgcagtccca cctggaatcc tgggcagtcc
      121 accaggtgca caattggcaa atggaaggtc tgggccgtat caacgaaacg gatgattttg
      181 tggcaggcgt cggcattcca ggcaccgccc tcgaacagcg gatcgccggc catgactgcc
      241 accggccagc catccaaccg ggcaaacccg gtgatgatgg aacgtccgaa catccgtccc
      301 atctcaaaga agctgtcctt gtcgaaaacg gacccaatga tgcggcgcat caaatacgcc
      361 tgtttcttgt tgcgcgggat gacactgacc aactgatcgt cggtgcgggc gggatcgtcc
      421 cagcccttcg ccctcggcgg cacgtcgtgg atcgaacccg ggagataaga caggaagcgc
      481 cgcgccattt cgaatgcgtc atcttcgctg tcaaccgctt catcgacggc accacaaccc
      541 aattgaattt cccacccacc cagttcctgt ttggtgcgcg gctcgcccag tcgctcgacg
      601 acagggggac cggcaacgaa gacggcggcg atttccttga ccattaccga gtagtgcgct
      661 gcaacaagac gtgccgcgcc gagaccggca accgaaccga gaccaagccc aacgaccggc
      721 acctcggcca tgttatcggc aaccagatcg aacgcggtcg tttcgctcaa accgcctggc
      781 agattggcgc gcccggtggt ctcgatggtc ttgaccgacc cgccgccacc ggacccctcg
      841 atcaggcgaa tgattggcat gcggaactga gcggcgatct gctcggacat tttcggcttg
      901 cccttgatcg aggcatcggc cgagccaccg cgcaacgtga agtcgtcacc ggcgacaacg
      961 acgggccgcc cgtcaaccat gccgcggcca aacacgcagt tgcccggcat gaagtcgatg
     1021 atgttgcctc ggccgtcgta ggtggccttg ccggcaatgc tgccgatctc cttgaaggtc
     1081 ccgggatcga gcaggtgatc gatgcgttca cgtaccgtca gccttccgcc tttgtgctgg
     1141 cgtgcaacac gctccttgcc gcccatctca cgggccagcg cctggcgctg acggagttcg
     1201 gcgagttcgg gttcccatcc aacctggact ggctttgatg tgtggatact gtcgttcatt
     1261 ctcgttcggc ccctgggtcc gggtcaggct aggatcgcgc gggcgatgtt gcaaatcatt
     1321 cctggccggc ggacgaagcc gtgccgccat ctcgtgtaac gccagtcatg acttttggga
     1381 acgacattcc ggttgccttg accggccatg accaaggcgc gagcatgccg caaacaaagg
     1441 aggacgcgca tgaccacggc ggacgagcgg agcgaaagcc tgcggatgat acgcgacagt
     1501 gccgcaggtt tggcgcctcg caccagtgat ttgcggcgca tccgtgcgtt gcggtttacc
     1561 gaaccggggt tcgatcgcgc cgtgtggcag cagatgtgcg aaatgggctg gccaggactg
     1621 ctgatttccg aacagcttgg agggtccggt ctcggcgtgc acgagttctg cgctttgacc
     1681 gaggaactcg gtgcgagtct gatgcccgaa ccattgatcc cggcggcatt cgccgcaatg
     1741 ctgctgccgg acgatcatct cggcccggta ttgagcgggg cgcggatcgt tctgccggcg
     1801 tggcaggagc agccgcatag tatctcggtg tctggttcgt gcgctttgtc ggatggacgg
     1861 ctgaacggac ggaaaatgtt cgtttcgatg gcgtcgggtg cggatgcatt tctggtgacg
     1921 gtgaagggcg ggctcgcttt ggtggaacgg gatgcacccg gggtgcatgt ggtttcgaca
     1981 ccggctcagg atggcggcaa tttcgcaacc gtgacattcg atgcggcgcc ggcgttggcg
     2041 ttgcccggtg atgcgagtga ggcgctggag atcgcggctt tggcaacgag cgcgtatctt
     2101 ctgggctgta tggaccgggt attcgggatc acgttggagt acctgaagac ccgtgagcaa
     2161 ttcggcaaga agattggatc gttccaggca ttgcagcacc gatcagcgga tttgcaaatt
     2221 caactggcgt tgacccgggc ggtggtggag gccgcggcgc ggacgatgga cagcgcgaaa
     2281 gatccccgcg tgcgacaggc ggcagtgtcc cgggcgaagg cacgggcgtc ggaggcggcg
     2341 agcatcatga cgcgcgggtg tatccagttg cacggcggca tcggttatac cgacgcggcc
     2401 gatcccggat tgtttctacg caagatgatg gtgctggcac cgatgttcgg ttcggcggcg
     2461 ttgcatcggg cgcgctatca gacagtggcg ccggatctgg atgaggagtg atcgggcttt
     2521 gccccgaggc cccacaagga ggctcatcga tccgcttcgc ggctcgatcc ttgacctccg
     2581 ccaagggcag tggcccttgg aaccattcat tttggtgccg gagcgggagg ggccgacaca
     2641 gaccttgctc taccggaaca agaccctcga cgccagctcg gcggcgtcca caacgggtgc
     2701 ggggaacagg aagaagaatg cggtgaacag gccggtggcc gcgacgacaa acgacaatgc
     2761 cgggggccgc cgatcgagtg cctcggcagg tggatcgaaa tacatcacct tgacgacgcg
     2821 gatgtaatag aacgctccca caacgctcgt cagcacgccg atcaccgcca gcgcgtagag
     2881 gccgcctttc accgctgcaa gaaagatata gagtttggca aagaaccccg ccatcaacgg
     2941 aatccccgcc aggctgaaca tgaacacgct gaacgccagc gcgaggcctg gatcagtcgt
     3001 tgcgagaccc gatagatcag caatttgctc gaccggttgc ccattgcgtt tcattgccat
     3061 gatgcaggca atggcgcccg acgtcatcag cacataaacg gtcatataga ccagcacgcc
     3121 acgcaccccg tccgacgatc caaccgagag accgatcagc gcgtacccca tatgcccgat
     3181 cgacgaatac gccatcagcc gtttgatgtt ccgcggcccg atcgcggcga acgagccaag
     3241 cagcatcgag gcaatcgcca ttagtacgat caacgattgc caggccggaa cgagctcggc
     3301 gaaggaggtg cccatcaccc gcaacagcaa cgccattgcc gcgactttcg ggccggtggc
     3361 aaagaacaaa gtgaccgggg tcggtgcgcc ctcgtagacg tccggcgtcc acatgtggaa
     3421 cggca
//
LOCUS       DATAVD010001790        11950 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1843633, whole genome shotgun sequence.
ACCESSION   DATAVD010001790 DATAVD010000000
VERSION     DATAVD010001790.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 11950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11950
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1843633"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            141..1007
                     /gene="accD"
                     /locus_tag="VHX39_34175"
     CDS             141..1007
                     /gene="accD"
                     /locus_tag="VHX39_34175"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HEX3996245.1"
                     /translation="MSWLTEVIRPKIRNLFARRDVPENLWSQCAGCQRMIFTKDFVAN
                     MRVCADCGHHTRGTAIERLTWTFDKDNFTRIELPRAVVDPLKFRDTKRYTDRLKEARE
                     ATHLEDAVVVGHGTIDGQNAVIAAMEFAFIGGSMGAGLGEAIVAAARLAVLQQAPLIV
                     FTASGGARMQEGAVSLMQMPRTVIATRLVKDAGLPFIVVLTDPTTGGVSASFAMLGDI
                     QIAEPGALIGFAGARVIEQTVREKLPDGFQRAEYLLQHGIIDMVVKRTEMKDTLARII
                     SLLRVKEVPEAA"
     gene            1004..2308
                     /locus_tag="VHX39_34180"
     CDS             1004..2308
                     /locus_tag="VHX39_34180"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003629670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008841 - dihydrofolate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="folylpolyglutamate synthase/dihydrofolate
                     synthase family protein"
                     /protein_id="HEX3996246.1"
                     /translation="MTALPDGQVSGRIGDIVARLHALHPRLIDLTLDRLLVLLGKLGN
                     PQMHLPPIIHVGGTNGKGSTCAFLRAMGEAAGKRVHVYTSPHLVRFNERIRVASELVT
                     DADLVAAMETVEQANAGAPITVFEVITAAAFYLFANTPAELCVLEVGLGGRGDATNVV
                     PPPASCAIASISLDHVELLGPTLEAIAGEKAGIMKPGVPLVTGAQPDPVYAVLNAEAQ
                     RIGTPLLQRGRDWTIEATAGGMRFADPAGMVDLPHPSLPGPHQLDNAGIAVAAMRAAG
                     LGVSNEAIARGIASAEWPARLQRLTGPLAARLPAEWELWLDGGHNPGAGEALAAHLAG
                     WRDKPVHLVVGMKMAKDSAEFLRPLIPLASSLWAVAEPDQHNALPVEAIVAASGGVAR
                     PGPLVTDALRNIPRGEGPARVLICGSLYLAGEVLKFDAIGAE"
     gene            2315..4096
                     /locus_tag="VHX39_34185"
     CDS             2315..4096
                     /locus_tag="VHX39_34185"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF014502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009341 - beta-galactosidase complex
                     [Evidence IEA];
                     GO_function: GO:0004565 - beta-galactosidase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase"
                     /protein_id="HEX3996247.1"
                     /translation="MRIVILACALLLTSPARASWDSFQIIEWQPRNPAQWKTLHGLGV
                     TAGAVVANRDGTGPSLDRQTAVLRDFGLGWYIENIATDFYASYHRYTPGRPVNWRFLA
                     AQQRYRAAPEDPAALFREPSLLDPAWRARISERLIATVRQQAPFHPLYYSLGDETGIA
                     DLAAVSDFDLSPQSVAGFRTWLRGQYGSLVALNAEWGTAYAAWDAIQPETTWQTMRRT
                     DDDFAAWNDFKAWMDTEFADALRFGTDAIHGADPHALSAIEGVQLPGWGGYDYARIAH
                     AVDVMEIYDSDEDLPLIRSINPAVIPLITSFAAAPSDIHDIWRSVLRGARGLILWDED
                     NSIVRPDASPGPRATAYAAEFAALRGPIGRRLSHAEPLYDPVAILYSPASFRLSWLID
                     HRHDGDAWMDRTAENEWQDNAWRAALRGYSEALAQLGLHPRFITEAQLADGAPAVSVL
                     ILPHSIALSGQELQSIATFVAKRGQLIADVPPGQFDWHGRRRIAPNVPATIVSPEHLA
                     AVLTLVPAVRVEAPNNDVETYLFRSDGRRLLALQRRTPRDTPETITVDLHAQQARDIA
                     TGRDYGRQDHLVLTLGPITPIFLELRR"
     gene            complement(4216..4752)
                     /locus_tag="VHX39_34190"
     CDS             complement(4216..4752)
                     /locus_tag="VHX39_34190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEX3996248.1"
                     /translation="MSHSHDHDDPHGHSHEGHSHEGPPAPGTVDWRLNGVRVIKGDQL
                     DTNTAQTPGMNRAAAINKARVGAQKIWAGTVNIHANAKTGAHHHGALESVIYVVRGKA
                     RMRWGEKLEFVAEADPGDFIFVPPYVPHQEINASSDETLECVLVRSDNEAVVVNLDIE
                     PIEKPEAVFWVDPIHKHP"
     gene            4932..5669
                     /locus_tag="VHX39_34195"
     CDS             4932..5669
                     /locus_tag="VHX39_34195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996249.1"
                     /translation="MAAFVVHPVRPDLEVRITRPMPPLHAETEARIDALWAAASARVA
                     AGGAGQLFNGQVFSIDTIAPDRITGHLSEYRRLVAQVEDHALFDELGIRSLAACGVLS
                     CSGGVVIGRRPAAAIYQPGMWQLCPAGSVDGGAAKSDGTMDYRAQLRTELREELGIGP
                     EVIGTITPLCVVEHPGSHVSDLGMAVRTSLSPDAILSAHRNSGNGEYDPLRIVPISEL
                     PGFIEWAGATLVPPAPIFLAHAGFLNA"
     gene            complement(5675..7312)
                     /locus_tag="VHX39_34200"
     CDS             complement(5675..7312)
                     /locus_tag="VHX39_34200"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S53 family peptidase"
                     /protein_id="HEX3996250.1"
                     /translation="MTDSHVELPDSRRPMAHGARRVRDLDPHTHVEVTLTLQAPPLPP
                     ADKLPAHALSAAELVQQYGASAHDVRKVEDVLRSFGLRVEGVGTSHRSMRVSGTAHAI
                     EAAFKADLAIYHNAEQGEFRGREGKLYVPAEISGLVHSVLGLDQRRMARRGSAAPSVA
                     ASAPLRPADLEELYNFPPGDAATQSIGIAEFGIPQHSGTVVVPAYFPDDVAAFCTAHG
                     RATPKITTVAVNLAPLTLAQYHALPHAMAKQVLGETSEVMMDVEIIAALCPAANISLY
                     FVGWDQKGWVDLLDKVTAARPVVLSISYGLAEDSPHWTASALQAINEALQIAAMAGIT
                     ICVSSGDDGSGCDMPDTRAHVEFPGSSPFVLAVGGTMLHGHGTAQSEVVWWEAPGQRL
                     ARRGGATGGGVSALFDRPAWQPEHLISLNHGSIAGRIVPDVAALAGAPYYELTLLGHS
                     SPAGGTSAATPVWASLIARIDAALPAAKRQRFRAPMLYHKTASGSTIGEAGCTDITAG
                     HNTSHPQPGKGYVAGKGYDAVTGWGVPNGKALLAALK"
     gene            complement(7551..8354)
                     /locus_tag="VHX39_34205"
     CDS             complement(7551..8354)
                     /locus_tag="VHX39_34205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate dehydrogenase"
                     /protein_id="HEX3996251.1"
                     /translation="MTRTVAVAGLGAIGLPLARALDGGIDGLQLVSVAARDLTKARAN
                     LAGFRNPPLLANFADLADADIVVEAVPAALFERVAMPAIEAGRIFVPCSVGALLPRLH
                     LVKRAQQTGARIVVPTGALLGLDAVRAAAEGRVDSITIETRKPPAALIGAPYLRKHGF
                     DMLDVTMPLRVFSGNARDAAVGFPANVNVAAALALAGIGPVRTKVEIWADPGLTRNVH
                     IICVEAEAARFTMRIENEPSDENPRTGKITALSVVACLRGLVSPLKVGS"
     gene            complement(8661..9311)
                     /locus_tag="VHX39_34210"
     CDS             complement(8661..9311)
                     /locus_tag="VHX39_34210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996252.1"
                     /translation="MEQPPQPANLSPSESAPIGSSVELAVLDAPVLVRGVLTMVLLHF
                     AEAGAFDPVWSDQIHADWVRELQRLRPDMPAERLRHRRVEMDRAFPVANVIASRDMQD
                     EVLAHCTTPAERRSSHVLATALSARAAVIVTDMSFCLREVMSKLWHDTAVLSPDDWCL
                     ELLDRHEAAVLEGSRSHCAGLVPGGGSVDSWLDLLRAPQVGLTATAGRLAALRDQL"
     gene            complement(9412..10335)
                     /locus_tag="VHX39_34215"
     CDS             complement(9412..10335)
                     /locus_tag="VHX39_34215"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HEX3996253.1"
                     /translation="MNPTGETPWKGLDTSQMPVFIGYDQVERMIASLLDEAAAWRPDA
                     VVAIARGGLVPAAMAAGILALPLSIVGHDATTGAVTWIGPPSAGRRILLVDDCCSSGN
                     TLQQTRTSLTEAGHECLTLVVVHDPDTVRHLPDLSHPMRALFRLPWERGEATPTGRAA
                     KVSGTRNALAAEAPFFALGVDETLLAEIASGDGPLRLPSDRAVLICGLAEPERARVVG
                     LLATAPYRNLPLEFRPLTTAAERSAIAQFKAETATRWGCTHFIECDAEQAIRIAAHAP
                     HLIVEWWPAGAERGWVVGAAAQPEAAGRSVP"
     gene            complement(10332..11375)
                     /locus_tag="VHX39_34220"
     CDS             complement(10332..11375)
                     /locus_tag="VHX39_34220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3996254.1"
                     /translation="MSHAGQSIGPCQSTTHRRTWFVAALGLALLQAPSAVPAHADDQV
                     TFGIDWLAEAEYGGYYQALATGIYAKHGLAVTIREGGPQVNQMQLMMAGRLDFNLGGG
                     RAIEFVQNHLPFVAIAAIFQKDPAVLIAHPDQGNDSFAALKGKPIEVASDARLSWFRF
                     LAAKYGYSESQIKLYTFNMAPFLSDKTLIQQGYLGSEPYVIEQTSGIKPVVLLAADGG
                     YNGYSNIITTSRKLIDEKPDLVQRFVDASIEGWYSFLYHDPTPANVAIKKSNPEMTDA
                     LLAYGRKAMLDHGIVDSGDALKLGIGAMTAERWRAFYNAMVGVGVYPAGIDVDQAYVT
                     KFVDHRAGITMKP"
     gene            complement(11536..>11950)
                     /locus_tag="VHX39_34225"
     CDS             complement(11536..>11950)
                     /locus_tag="VHX39_34225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996255.1"
                     /translation="RHFVSGLLPQVAYSLPYAGFDPAARKPPERIAITSIQDIHRCAS
                     MTTNIIIDSFEEDKHHGDTDSFATFCASLRYLRFSFALLSQCRTVVVTAISRQGKRKT
                     RKEPQKAASSPDGQTKDRVRDQRPVFRVGRKVVAS"
BASE COUNT         2191 a         3801 c         3736 g         2222 t
ORIGIN      
        1 atatcctggc ccggaacgtg ctggagctgc ccggttgagt ccgtcatcgc ccttccctcc
       61 gtcatcgccg ggcttgaccc ggcgaccccg cgcaccacgt tgctgccgat agcgccgccg
      121 caaccacgaa ggcccatcgc atgagttggc tgaccgaagt catccgtccg aaaatccgca
      181 acctgttcgc ccgccgcgac gtgccggaga atctctggag ccagtgcgcc ggctgtcagc
      241 gcatgatctt caccaaggac ttcgttgcca atatgcgggt ttgcgccgat tgcggccacc
      301 acacccgcgg caccgcgatc gagcggctga cctggacctt cgacaaagac aattttacgc
      361 gtatcgaact gcccagggcg gtggttgatc cgttgaagtt ccgcgatacg aaacggtata
      421 cggatcgatt gaaggaagcg cgcgaggcga cccatctcga agacgccgtg gtggttggcc
      481 atggtaccat cgacggccag aatgccgtca tcgccgccat ggaatttgcc ttcatcggcg
      541 gttccatggg tgccggactg ggcgaggcaa tcgtcgccgc ggcacgcctc gcggtgctgc
      601 aacaggcgcc gctgatcgtg ttcaccgcct cgggtggcgc tcggatgcag gagggcgccg
      661 tcagcctgat gcaaatgccg cgcaccgtga tcgccacgcg cctggtcaaa gatgccggtc
      721 tgcccttcat cgttgtgctg accgacccga cgaccggcgg cgtgtctgct tccttcgcca
      781 tgttgggcga catccagatc gccgagcccg gcgcactgat cggtttcgcc ggcgcacgtg
      841 tgatcgaaca gaccgtgcgt gaaaaactgc cggacgggtt tcaacgcgcc gaatatttgt
      901 tgcagcatgg catcatcgac atggtcgtga agcggaccga gatgaaggat accctggctc
      961 gcatcatttc gttgctgcgg gttaaggaag tgccggaggc tgcgtgaccg cgctgcccga
     1021 cggccaggtt tcaggccgga ttggcgatat cgtcgcacgg ctgcacgcgc tgcatcccag
     1081 gctgatcgat ctgaccctgg accggttgct ggtgttgctg gggaaactcg gcaatccgca
     1141 aatgcacctg ccgccgatca tccatgttgg cggcaccaac ggtaaaggca gcacctgcgc
     1201 ctttttgcgc gcgatgggcg aagcggccgg caaacgggtg cacgtctaca cctcgccgca
     1261 tttggtgcgt ttcaatgaac gcattcgggt cgcgagcgaa ctggtcaccg atgccgatct
     1321 cgttgccgcc atggagacgg tcgaacaggc gaacgccggc gcaccgatca ctgtgttcga
     1381 ggtcattacc gcggcggcgt tttatctgtt cgccaacacg ccggcggagc tgtgcgtact
     1441 tgaggtcggg cttggcggcc gcggcgatgc gaccaatgtc gttccgccgc cggcgtcctg
     1501 tgccatagcc tcgatatcgc ttgatcatgt cgaactgctt ggtccgacat tggaagcaat
     1561 cgccggcgaa aaggcaggga tcatgaaacc cggcgtgccg ctggtcaccg gggcacagcc
     1621 cgatccggtc tacgcggtgc tgaacgccga ggcgcaacgg atcggcacac cgctgctgca
     1681 acgcggccgc gactggacga tcgaggcaac cgcgggcggc atgcgatttg ccgacccggc
     1741 gggcatggtc gatttgccgc acccgtccct gcccggcccg catcaactcg acaatgccgg
     1801 catcgccgtc gcagcaatgc gcgcggccgg gttgggtgtt tcgaacgagg cgatcgcgcg
     1861 cggcattgct tcagcggagt ggccggcgcg gctgcaacgt ctgaccggcc cccttgccgc
     1921 acggttgccg gcggaatggg agctctggct ggacggcggc cataatcccg gtgccggaga
     1981 ggctctggca gcgcaccttg cgggctggcg cgacaagccg gttcacctgg ttgtcggtat
     2041 gaaaatggcg aaggactctg cggagtttct gcggccattg atcccgctgg ccagctcgct
     2101 ttgggccgtc gcagagccgg accaacataa cgctttgcca gtcgaggcca tcgtcgcggc
     2161 ttcgggcggc gtggcgcgac cgggtccgct ggtcaccgat gcgttgcgaa acattccgcg
     2221 cggagaagga ccggctcgcg tgctgatctg cggcagtctt tacctcgccg gcgaggtatt
     2281 gaagtttgat gcaatcgggg cggaatgaca tttgttgcgc attgtcattc tggcatgcgc
     2341 gctgctgttg acttcgccag cccgcgcgtc atgggattcg ttccagatca tcgagtggca
     2401 gccgcgtaac ccggcacaat ggaagacttt gcacggactt ggggtgactg cgggtgcggt
     2461 ggtggccaac cgggacggca ccgggccatc gctggatcgc cagaccgcgg tgctgcgcga
     2521 cttcggcctg gggtggtaca tcgaaaacat cgcaaccgac ttttatgcat cctatcatcg
     2581 ttacacaccg ggacggccgg tgaactggcg gttcctcgcc gcgcaacaac gctatcgggc
     2641 ggcgccggag gatcccgccg cgctgttccg cgagccgtcg ttgcttgacc cggcgtggcg
     2701 agcacggatc agtgaacggt tgatcgctac ggtcaggcaa caggcgccat tccatccgct
     2761 gtattactcg cttggtgacg aaaccggcat cgcggatctg gccgccgtct cggatttcga
     2821 tctgtcgccg caatcggtcg ccggtttccg cacatggtta cgcggtcaat acggctccct
     2881 ggtggcgttg aatgccgaat ggggcacagc atatgccgcc tgggacgcga tccagccgga
     2941 aaccacctgg caaaccatgc ggcgcaccga cgacgacttt gcagcgtgga acgacttcaa
     3001 agcctggatg gacaccgagt tcgccgatgc gttgcggttc ggcaccgatg ccatccatgg
     3061 cgccgaccca catgcgctca gcgcgatcga gggcgtgcag ttgcccggct ggggcggcta
     3121 tgactacgcc cggatcgcgc atgcggtcga cgtgatggag atttacgaca gcgacgaaga
     3181 tcttccgctg atccgctcga tcaatcctgc ggtcattccg ctgatcacca gtttcgctgc
     3241 ggcgccctcc gatattcatg acatctggcg cagtgtgctg cgtggcgcgc gtggcctgat
     3301 cctgtgggat gaggacaaca gtatcgtccg cccggatgcg tcacccggcc ctcgcgcgac
     3361 ggcgtacgct gcggaatttg ccgcgctgcg cggaccgatt ggccgccgtc tgagccatgc
     3421 cgagccgctg tatgatccgg tggcgatcct gtattctccg gcgagctttc gcctgtcctg
     3481 gttgatcgac caccgccacg atggcgacgc ctggatggac cggaccgccg agaacgaatg
     3541 gcaggacaat gcctggcgag ccgcgctgcg cggttactct gaggcactgg cacagctcgg
     3601 gctgcatccc aggttcatca ccgaggctca gctggcggat ggcgcaccgg ccgtctcggt
     3661 gctgatcctg ccgcacagca ttgctttgtc cggtcaggaa ttacagtcga tcgctacgtt
     3721 cgttgccaaa cgtggccagt tgatcgccga tgtgccaccc ggccagttcg attggcatgg
     3781 acgccggcga atcgcgccga atgtgccggc cacgatcgtt tcaccggagc atttagcggc
     3841 tgtgctgacg ctggtgcctg ccgttcgtgt cgaagcgcca aacaacgatg tcgaaactta
     3901 cctgttccgt tccgatggca ggcgattgct ggccttgcag cgccggacgc ctcgggacac
     3961 gccggaaacc atcacggtcg atctgcatgc acagcaggcc cgcgacattg ctaccggtcg
     4021 cgattatggc aggcaggatc atctggtcct gacgctcggc ccgataacac cgatctttct
     4081 ggagctacgc cggtaacgtc aaaggccgcg ataatcgacc accttactac attcgcggct
     4141 ggcatcgtgg gtcagagcag aacgcctgtt attgcaaggc atggcagccc gtaaaggctg
     4201 acgctcagac tcgcgtcagg gatgcttgtg gatcggatcg acccagaaca ccgcttccgg
     4261 cttctctatc ggctcgatgt caaggttgac caccacggct tcgttgtcac tgcgcaccaa
     4321 cacacactcc agggtctcat cgctactggc attgatttcc tggtgcggga catagggcgg
     4381 gacgaagatg aaatcgccgg ggtcggcctc ggcgacaaac tccagcttct cgccccagcg
     4441 catccgggcc ttgccgcgca cgacgtaaat tacgctttcc aacgcgccgt ggtgatgcgc
     4501 gccggttttg gcgttggcgt ggatgttcac cgtgccagcc cagatcttct gcgctccgac
     4561 gcgcgctttg ttgatcgctg cggcacggtt catgcccggc gtctgcgccg tgttggtgtc
     4621 gagttggtcg cccttgatca cccgcacgcc attcaaccgc cagtcgacgg tgcccggagc
     4681 cggcggcccc tcatgcgagt gcccctcatg cgagtgcccg tgtggatcat cgtgatcgtg
     4741 gctgtgactc atgatatcgg ctccgcgcaa cggtcaggcg gcttggtcgc aggttcggtc
     4801 gaaccggaaa agcctcgccc aaggtttagg ccaggtcttg cccaattgcc acatacggaa
     4861 aaaaccaccc tccgaaccac gatcacacga ttgaaacccg ccggtcccct gggcctgcta
     4921 taaccgccgg catggcagcg ttcgtcgtcc acccggtccg acccgatctc gaagtccgca
     4981 tcacccggcc gatgccaccg ttgcacgcgg aaaccgaggc ccggatcgac gcgctctggg
     5041 ctgccgcatc ggcgcgtgtc gccgcaggcg gggccggaca actgttcaac ggccaggtgt
     5101 tctcgatcga caccatcgca ccggaccgca tcaccggtca cctgtccgaa tatcgccgcc
     5161 tcgtcgcgca ggttgaggac catgcgctgt ttgacgagct tgggatccgc tcgctcgccg
     5221 cttgtggcgt gctgagttgt tccggcggcg ttgtcatcgg ccggcgtccg gcagcagcga
     5281 tttaccaacc gggcatgtgg caactctgcc cggcggggag cgtggacgga ggagcggcca
     5341 aatcggatgg gacgatggat taccgggcgc agctacggac cgaactgcgg gaagaactcg
     5401 gcatcggtcc cgaggtaatc ggcaccatta ccccgctgtg cgtggtggaa caccccggaa
     5461 gtcatgtcag cgatctcggc atggcggttc gcacatcgct cagcccggat gccatcctgt
     5521 cggcgcaccg caacagcggc aacggcgaat acgacccgtt gcgtatcgtt ccaatatcgg
     5581 aacttcccgg cttcatcgaa tgggcaggcg ccacgctggt gccacccgcg ccgatcttcc
     5641 tggcccatgc cggtttcctt aacgcctgac cgcgttactt cagagcagcc agcagcgcct
     5701 tcccgttcgg cacaccccag ccggtgacag catcataacc tttgccggcg acatatccct
     5761 tccccggttg cggatgcgac gtgttgtggc cggcggtgat gtcagtacaa ccggcctcgc
     5821 caatcgtgct gcccgatgcc gtcttatggt aaagcatggg cgcgcggaac cgctggcgct
     5881 ttgctgcggg caacgcggca tcaatacggg caatcaacga cgcccacacc ggcgttgccg
     5941 cactggtacc gccggccggc gatgagtggc cgagcaaggt cagttcataa tacggcgcac
     6001 ccgcgagtgc cgcgacatcg ggcacgatgc ggccggcaat actgccgtgg ttcaacgaaa
     6061 tcaggtgctc gggctgccac gccggccggt cgaacaaggc actgacaccg ccgcccgttg
     6121 cgccacctcg gcgggcgagg cgctggccag gagcttccca ccaaacgacc tccgactgcg
     6181 ccgtgccgtg gccgtgcagc atcgtgccgc cgaccgcgag cacaaatggg ctggagccgg
     6241 ggaattccac gtgcgctctg gtgtcaggca tatcgcaccc agacccgtcg tcgcccgagg
     6301 agacgcaaat cgtaatcccg gccatcgccg caatttgtaa tgcttcattg atcgcctgga
     6361 gcgcggaggc ggtccaatgc ggcgagtcct cggccagtcc gtaactgatc gacaacacga
     6421 cgggtcgagc agcggtgacc ttgtccaaca ggtcaaccca gcccttctga tcccaaccga
     6481 caaagtacag cgaaatattt gcggccggac acagcgcggc aatgatctcg acgtccatca
     6541 tgacctcgga cgtctcaccg agcacctgct tcgccatggc atgcggcaat gcatgatatt
     6601 gcgccaaagt cagcggcgcc aaattcaccg caactgtcgt tatcttcggc gtcgcacggc
     6661 catgggccgt acaaaacgca gcgacatcgt ccggaaaata cgcgggcaca acgacggtgc
     6721 cggaatgttg cggaatgccg aattccgcga tcccgatgct ttgcgtcgcg gcatcgccgg
     6781 gcgggaaatt gtaaagttcc tcgaggtcgg ccggccgcag cggcgccgac gcagcaaccg
     6841 aaggcgcagc actgcctcgc cgagccatcc gccgctggtc caggcccagt acgctgtgca
     6901 caagcccgga gatttcggcg ggcacgtaga gcttaccttc ccgccctcgg aactcgccct
     6961 gttcggcatt gtgatagatt gccaggtcgg ccttgaaagc ggcttcgatg gcgtgtgccg
     7021 tgccgctgac ccgcatgctg cgatggctgg taccgacgcc ctcgacccgc aggccgaagg
     7081 atcggagcac gtcttcgact ttccggacgt catgcgcgga ggcgccgtat tgctgcacga
     7141 gttcggccgc gctcaatgcg tgcgccggca gtttgtcggc cggcggcaat ggcggggctt
     7201 gcagtgtcaa cgttacttcg acgtgggtgt gcggatcgag atcgcggacc cggcgtgcac
     7261 catgcgccat tggccggcgg ctgtccggca gttccacatg cgaatcggtc attctggccc
     7321 ccagaaagtg gcgttctcgc gcggttaagc gactgcccgt acgtttatcc gattatttgc
     7381 tgtcgcgacg ggatgatttg ctggacttta gctcgttctg gtcccgtcac ctgtgacgta
     7441 gatcacagat ccaccgaatg tcttccgatt ttccgccccg ccagacaatg gcgccgcccc
     7501 cctgggctta tccccctggg cttacccccc ctgggcttac ccctctgggc tcagctcccc
     7561 accttcagcg gcgaaacgag gccgcgcaaa caggccacca ccgacagcgc cgtgatcttc
     7621 cccgttcgtg ggttctcatc gctgggttcg ttttcgatcc gcatggtaaa ccgcgcggcc
     7681 tcggcctcga cgcaaatgat gtgcacattt cgggtcaacc cgggatccgc ccatatttcg
     7741 acctttgtgc gtactgggcc aatgccggcc aatgccagcg ccgctgccac attgacgttg
     7801 gccggaaacc ccacggcggc atcgcgcgca ttgccggaga acacccgcag cggcatcgta
     7861 acgtccaaca tgtcaaagcc atgcttgcgc aaatacggag cgccaatcag tgcggccggc
     7921 ggcttgcggg tttcgatcgt gatgctgtcg acccgaccct cggctgccgc gcgcaccgca
     7981 tccaacccga gcagcgcccc ggtcggcacg acaattcgcg ccccggtttg ttgcgcccgt
     8041 ttcaccaaat gcagtctggg caacaacgcg ccgaccgagc atggaacgaa aattcgtcct
     8101 gcctcgatcg ccggcatggc gacgcgttcg aataacgcgg ccggcaccgc ttcaacgacg
     8161 atatcggcat ccgccagatc ggcgaagttc gccaacaacg gcggattgcg gaaaccggcg
     8221 aggttcgcgc gcgctttggt caggtcgcgg gccgccaccg ataccagttg caatccatcg
     8281 atcccgccgt ccagcgcgcg ggcaagcggc aatccaatcg cgccaagccc ggccactgcg
     8341 accgttctgg tcatgtttga ccctccgtta ccccaaccca tgatcctccc gtccgcaggt
     8401 ggtccgtcag agatggggcc agctcgacat cggcgggcgg gttcacaatg cggaacgcgt
     8461 cccacgtggc aagcagaaaa tcaagccggt gattcccgat catttcggcg aattgtccga
     8521 catgcgcggg cctggccgag catcgctcac ggcgcaggca caaggcggcg acaaggttgc
     8581 ggcaggatca cgtggcacaa acggcgtatc gccccgtacg gtttgcaacg ccgttgcatc
     8641 agtgaaaact gcccggtcga tcagagctga tcccgcaagg cggcaagccg gccggcggtc
     8701 gcagtcaggc cgacctgcgg cgcccgtaac aagtcgagcc aggagtcgac ggagccgcct
     8761 cctggcacga ggccggcaca atgcgagcgg ctgccctcca gcactgccgc ttcgtggcgg
     8821 tccaacagtt ccaggcacca atcatccggc gaaagtaccg cagtgtcgtg ccagagtttc
     8881 gacataacct cgcgcaggca gaacgacata tcggtcacga tcacagcggc acgcgccgac
     8941 aacgcggtgg cgaggacatg ggacgacctg cgctcggccg gggtcgtgca atgggccagc
     9001 acttcatcct gcatgtcgcg gctggcgatc acgttggcaa ccggaaaggc gcggtccatc
     9061 tcaacccggc gatgccgcag ccgttcggcc ggcatgtccg ggcgcaaacg ctgcagctcg
     9121 cgcacccaat cggcgtggat ttggtcggac cagacggggt cgaaggcgcc agcctcggcg
     9181 aaatggagca gcaccatcgt cagcacgccg cgcaccagca ccggagcgtc gaggacggcg
     9241 agctcgacgc tcgacccaat cggggcggat tcagagggag agagattggc gggctggggc
     9301 ggttgttcca cggaatgacg cctctcggcc aaagctggca gagttgggta gtcccgcatg
     9361 ggccgcagtt gcaagacgga agtatgccag acggcccctg tcacgatgca gtcacggaac
     9421 ggaacgaccc gccgcttccg gttgcgccgc agcgccaacg acccatccgc gttcggcgcc
     9481 cgccggccac cactccacaa tcaaatgcgg cgcatgggct gcaatccgga tcgcctgctc
     9541 ggcgtcgcat tcgatgaagt gcgtgcatcc ccagcgtgtc gcggtctccg ccttgaactg
     9601 cgcgatcgca gatcgttccg cggcggtcgt cagaggccgg aactccaggg gcaaattccg
     9661 atatggtgcc gttgcgagca ggccgacgac ccgggctcgt tccggctcag cgaggccgca
     9721 aatcaataca gcccgatcgg atggcaggcg cagtggacca tcgccggaag cgatttcggc
     9781 cagcagcgtt tcgtcaacac ccagagcaaa aaacggggct tcggcagcga gggcattgcg
     9841 cgtgccggaa actttggcgg cacggccggt cggggttgcc tcaccgcgtt cccatggcag
     9901 tcgaaacagt gcgcgcatcg gatgcgacag atccggcagg tggcggaccg tgtcggggtc
     9961 gtgcacgacg accagggtga gacattcgtg gccggcctcg gtgagtgacg tgcgggtctg
    10021 ttgcaacgta ttgccgctgg aacaacaatc gtcgaccagc aaaatgcggc gcccagccga
    10081 gggcgggccg atccaggtca ccgccccggt ggtcgcgtcg tggccgacaa tggataacgg
    10141 cagcgcaagg atccccgccg ccatcgctgc cggcaccagg ccgccgcggg caattgccac
    10201 gactgcatcc ggccgccagg cggctgcctc gtccaacaga gatgcaatca tccgctcgac
    10261 ctgatcatag ccgatgaaca ccggcatttg actggtatcg agacctttcc agggagtttc
    10321 gccggttggg ttcatggttt cattgttatt ccggcacggt gatcgacgaa cttcgtaaca
    10381 taggcctggt caacgtcgat accggccgga tagacgccca cgccgaccat ggcattgtag
    10441 aacgcgcgcc accgctcggc cgtcatcgcg ccgatcccga gcttgagtgc atcgccggaa
    10501 tcgacgatgc cgtggtcgag catcgccttg cggccataag ccagcagcgc atcggtcatc
    10561 tccggattgg atttcttgat cgccacgttg gccggggttg gatcgtgata gaggaaggaa
    10621 taccagccct cgatcgaggc gtcgacgaag cgctgcacga ggtcgggctt ttcgtcgatc
    10681 agttttcggc tggtggtgat gatgttggaa tagccgttgt agccgccatc ggcggccagc
    10741 aagaccacgg gtttgatgcc gctggtttgt tcgatgacgt atggctcgga tccaagatag
    10801 ccttgctgga tcagggtttt gtccgacagg aacggtgcca tgttgaaggt gtagagcttt
    10861 atttgtgact cgctgtagcc gtatttggcg gcgaggaagc gaaaccagct aagccgggcg
    10921 tcggacgcga cctcgatcgg cttgcctttg agagcggcaa aactgtcgtt gccctggtcg
    10981 ggatgggcga tcaggacggc cgggtccttt tgaaagattg ccgcgattgc gacgaagggt
    11041 aaatgatttt gcacgaactc gatggcgcgg ccgccgccga gattgaaatc cagccgcccc
    11101 gccatcatca attgcatctg attgacctgc gggccacctt cgcgaatggt gacggcgagg
    11161 ccatgtttgg cataaatgcc ggtcgccagg gcctgataat agccaccgta ttccgcttcc
    11221 gccagccaat cgatcccaaa cgtaacctgg tcgtctgcat gggccggtac cgcagaagga
    11281 gcctgcaata gtgcgaggcc cagcgctgca acgaaccagg tgcggcggtg cgttgtggat
    11341 tggcacggtc cgatggactg cccggcatgg ctcacaaaat atcgtatcaa atcgaaacat
    11401 ttccgcattg cattggcccc gctgcgtcct gtcgtgttgc atcccgatgg aagtcgatcc
    11461 gtaaccgttc cacggtcacg gtccggctcc aggcccattt agcgctgccg actgcatggc
    11521 accaccctgt ccgtgtcagg aagcaacgac cttgcgaccg acgcggaaga ccgggcgctg
    11581 atcgcgaaca cgatccttgg tctgaccatc ggggcttgac gcggcttttt gcggttcttt
    11641 gcgtgttttg cgttttcctt ggcgagaaat agcagtaacc acaaccgttc ggcactgcga
    11701 cagcaaagca aaagaaaaac gcaaataacg caaagaagcg caaaaagtcg cgaaggagtc
    11761 agtgtcacca tgatgcttgt cctcttcaaa tgagtctatg atgatatttg ttgtcatcga
    11821 agcgcatcgg tgaatgtcct ggatcgacgt gatggcgatc cgttcaggcg gtttccttgc
    11881 ggctgggtca aagcccgcat agggtaacga gtatgcgacc tggggcagca atccgctcac
    11941 gaaatgccgt
//
LOCUS       DATAVD010001791         6068 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1469382, whole genome shotgun sequence.
ACCESSION   DATAVD010001791 DATAVD010000000
VERSION     DATAVD010001791.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6068
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1469382"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(291..1685)
                     /locus_tag="VHX39_34230"
     CDS             complement(291..1685)
                     /locus_tag="VHX39_34230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEX3996256.1"
                     /translation="MHEFSTETAIIGGGQAGIPLARTLADAGRPVALFESTHLGGCCV
                     NFGCTPSKAVIASARRAADARRGAGLGIHASGVRVDFLAVMERARGLVAEAVGELDAD
                     FSKSDNPRLVRGHARLEGRERDRFLIRAGETLVRANRIVLDTGTRTARPPLPGLDEAP
                     VITAEDWILLRSLPPRLLMLGGGYIALEMAQTFQRLGSAVTVIQKASQLAEHEDTDVA
                     DELKAALEGDGCRVILNADAKRIEATESGVRVHLGDEVLDGSHLFLATGRQPNTDDLG
                     LATVGVRLDKHGIVEVDDHLATNVTGIWAAGDIRGGPAFTHTAYDDFRVLKSRFVGDG
                     MDSRCRIVPYAMFTTPELGRVGMSEMEARKSGKRFKVAKRPMTESGKARELGKTEGFI
                     KVIVDAETDMILGATACCEQGSEIVQLFVELMNSGATTKTVRNAVHIHPTLAEAAKNA
                     AIEAGCADVQEGAL"
     gene            complement(1730..2899)
                     /locus_tag="VHX39_34235"
     CDS             complement(1730..2899)
                     /locus_tag="VHX39_34235"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HEX3996257.1"
                     /translation="MQERKAPFETKLLDRLMDQGDVDLLIATSKPNVRYLLGGYRFHF
                     YEHADAIGQSRYLPIFLYPRGRPDRAVYVGHRMETAQLEVQPIWTPTVRAVSAGSADA
                     MRRAIPFMEQIDRHPARIAAELAFLPADAMRVLREAFPEADITDALPTLERLRARKSE
                     VEINKLRTASDQVIDAMLTVIARHGPGTTKRDLVEALRREETGRGLEFDYCLITAGTS
                     LNRAPSDQPWRQGDILSLDSGGNYQGYIGDVCRMGILGEPDGELTDLLAEVDAVQQAA
                     MHAVRASVPGGSVYAAAEAALRSAPDRRDIDFVAHGMGLVSHEVPHLTSTGPVPYEAE
                     DAERPLEASMVLSIETTLQHKRRGFIKLEDTVLVRPNGFEILGEAGRGWNKGAAT"
     gene            3201..4340
                     /locus_tag="VHX39_34240"
     CDS             3201..4340
                     /locus_tag="VHX39_34240"
                     /inference="COORDINATES: protein motif:HMM:NF013215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IB"
                     /protein_id="HEX3996258.1"
                     /translation="MSQAIVLPPDLSSTALSLDVLKATAKAAKLRYVSDRSRGIRRER
                     SGDSFNYIGVHGAKITDEEELTRIRKLAIPPAYENVWICAFPNGHLQATGRDARGRKQ
                     YRYHPRWRAVRDEGKYGKMLIFGKALPAIRAQVERDLSKRGLPREKVLAAIVRLLEGT
                     LIRVGNEEYAKSNNSFGLTTLRNRHVKIDGDSRIRFDFRGKSGAEHHINLHDRKLAAI
                     VRRCHELPGQELFQYLDGEGQPHTVGSDDVNEYLRDITGEEITAKDFRTWAATNLAAL
                     ALQRLEMFDSQAKAKKNVLQAVEAVARMLGNTPAICRKCYIHPAIFDGYLDGRLLEAL
                     KRRSGEKLADPGHGLRAEEAAVIGFLAHELEGIAGKKVTTNATGR"
     gene            complement(4527..5804)
                     /locus_tag="VHX39_34245"
     CDS             complement(4527..5804)
                     /locus_tag="VHX39_34245"
                     /inference="COORDINATES: protein motif:HMM:NF016301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HEX3996259.1"
                     /translation="MTSVCTGGRMLLACPNCAAVQTVAPSPPRARVLCRVCDIVLEDH
                     RGRGLDAPLACALTTLLLLFPANFLPMMTVHLAGIASSTHLASGLLTAARQGWPLVTL
                     VLALQGFLLPFAYFGLLAGTLTAVRLGFRGALLGRLFRYSLLLDRWAMLDVLAIGFGV
                     GWERVQSQIPVTIDAGGWCFLATALLTLITRTTLEKRAVWRHLAMPEQALGPDVAACT
                     TCDLVLPGSRTGRACPRCAAPLHRRRPGSLRLCLALTLTSWVLIPPSYILPMSILWKV
                     GTPHPHSIPIGIVRLFSSGFWPLGILIIVTSIGVPLGKLLVLSWCMLAIRYRSSGRLR
                     LRTRLLNLVDTVGRWSNLDPFTVMVFAPMMQFGQLAHIEMGGGTLAFLMVVALSMLAA
                     HVLDPRLMWDAADAGAARNSTSIAREPSLGLNT"
     gene            complement(5801..>6068)
                     /locus_tag="VHX39_34250"
     CDS             complement(5801..>6068)
                     /locus_tag="VHX39_34250"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX3996260.1"
                     /translation="GPSAALWTAAIYAGCHMLEGYVVGPLVQRRMVRMPPAVIIVSLS
                     VSAGLFGPLGFVLGAPLGVVALVLVKRLYTDRLGDEPGGTRLLP"
BASE COUNT         1200 a         1947 c         1864 g         1057 t
ORIGIN      
        1 ggaagtgctg gcgtcggtac ttccgggtcg agattgacgt tgcgtctgcg gcacggatca
       61 gacggtcatc gcgtcggctg ggatgatccc ggccgacgca ccggaaggcc gcggaaacac
      121 ttcgtttacg gccacctctc acccccgttc tgcttacgat agactaaagc ctgactttgg
      181 cccgtggagc cttgccggat ttcgcgggca aataattgtc ttcccgtcgt tgaaggaagg
      241 gattgcgtcg gcgtgaactg gtcgtcgaat gaccatgagg tgattatact ctagagcgcg
      301 ccttcttgaa cgtcggcaca gccagcctca atcgctgcgt tcttggccgc ttcggcaagc
      361 gtcggatgaa tatgcaccgc gttccgcacg gtcttcgtgg tggcgccgct gttcatcagc
      421 tcaacgaata actgcacaat ctccgatccc tgttcgcaac aggcggtcgc accgagtatc
      481 atatcggtct ctgcatcaac gatgaccttg atgaacccct cggttttacc caattcgcgg
      541 gccttgccgc tttcggtcat cggccttttg gcgaccttga aacgctttcc ggatttgcgg
      601 gcttccattt cgctcatgcc gacccggcca agttcgggag tggtgaacat cgcgtacgga
      661 acgatacggc accgcgaatc catcccatcg ccgacaaacc gcgacttcag cacccggaaa
      721 tcatcgtaag ccgtgtgcgt aaaggccggg ccgccacgga tgtccccggc cgcccatata
      781 ccggtgacgt tcgtggccaa gtggtcgtcg acttcgacaa tgccatgctt gtcgagcctg
      841 acgccaaccg tcgccagacc cagatcatcg gtattgggct gccgtcccgt tgccaggaac
      901 aggtgacttc catcaaggac ctcgtcgccg agatggacgc gcactcctga ctctgttgcc
      961 tcgatccgtt tggcatccgc gttgagaatg acccggcagc cgtcgccctc caacgcggct
     1021 ttcagttcgt ccgcgacgtc tgtatcttca tgctccgcca gttgagaggc tttctggatc
     1081 accgttacgg ccgaacccag gcgctgaaac gtctgcgcca tctcaagtgc gatgtagccg
     1141 ccaccgagca tcagaagtcg agggggcagg gagcgcagta aaatccagtc ttccgcggtg
     1201 atgacgggtg cttcatcaag gccgggcagc ggcggccgag cggtccgcgt gccggtgtcg
     1261 aggacaatgc gatttgcacg caccagggtt tcgccggctc ggataaggaa acgatctcgc
     1321 tcgcgccctt ccaggcgagc gtgacccctc acaaggcgcg gattgtcgga tttcgagaag
     1381 tcggcgtcca gctcgccaac ggcctcggcc accagcccgc gagcacgctc catgactgcc
     1441 agaaaatcca cgcgaacacc cgaggcatga atacccaggc cggcgcctcg tctggcatcg
     1501 gccgcacggc gcgcggacgc aatgaccgcc ttgctcggcg tgcatccgaa gttgacgcag
     1561 cagccaccca gatgggtgct ttcgaaaagc gcgaccggcc ggcccgcatc ggcaagcgtt
     1621 cgtgcaagtg gaatgccggc ctgaccaccg ccaatgattg ctgtttcggt cgagaactca
     1681 tgcatgacca attacacatc cttgatttcg ttgtggtcag acgtgccgct cacgtcgcgg
     1741 cccctttgtt ccagccgcga cccgcttcgc ccaggatttc gaacccattt ggccgaacca
     1801 gcacggtatc ttcaagtttg atgaagccgc gccgcttgtg ctgcaacgtg gtttcgatcg
     1861 acaacaccat cgacgcctcg agcggccgct ccgcatcctc agcctcgtag ggaaccggcc
     1921 cggtgcttgt cagatgcggc acttcgtggc tgaccaggcc catcccgtgc gcgacaaagt
     1981 caatgtcccg acgatcaggt gcagaccgca gcgcagcctc cgcggcggca taaaccgacc
     2041 cgcccggcac gctggcacga accgcatgca tcgccgcctg ctgaacggcg tcgacttccg
     2101 cgagcagatc ggtcaattcg ccatctggtt cgcccaggat tcccatccgg cagacgtcgc
     2161 caatgtagcc ctggtagttt ccgccggaat ccagggacag gatgtcaccc tgccgccaag
     2221 gctgatcgga cggcgcacga ttgagactgg ttccggccgt gatcaggcaa taatcgaatt
     2281 ccaggccccg accggtttct tcccgccgca gcgcttcgac cagatcccgt tttgtggttc
     2341 ccggcccgtg ccgggcgatg acggtcagca tcgcgtcgat gacctggtcg gacgctgttc
     2401 gcagcttatt gatttcgact tcgctcttgc gggcgcgcag ccgttccaga gtcggtagcg
     2461 catcggtgat atcggcttcg ggaaaagcct ctcgcaggac gcgcatcgca tccgcgggca
     2521 gaaacgcaag ttcggccgcg atacgtgcgg gatgccggtc tatttgctcc atgaacggaa
     2581 tcgcgcgccg catcgcgtct gccgaacccg cggacacagc ccgaacggtg ggggtccaaa
     2641 ttggttgaac ctcaagctga gcagtctcca tcctgtggcc gacatagacg gctcggtctg
     2701 gcctgccgcg cggatacaga aagatcggca gataacggct ttgtccgatc gcatccgcat
     2761 gttcatagaa gtggaaccgg taaccgccaa gaagataccg cacgttcggc ttggaagtcg
     2821 caatcaacag atcgacgtct ccctgatcca tcaggcggtc cagcagtttc gtttcgaatg
     2881 gcgctttccg ctcctgcatc gtcgctgtcc tccagtgtcg gcaagagaca aacgcatcgt
     2941 agccggcggg gtttgtgcgg ttgctggaag tgactgtcat cgaattgtga cattcccgtt
     3001 cacgtcaggc gtcgtgtcat gggacatgtc ctgtctggcg ccgattgttg acgcggcggc
     3061 agcaagcgtg tccacgacct gccggcattt cggcacgagc gtgaggacct tgggagcttg
     3121 ccgagcctcg cctcgtggcg gggtcggagc acgatcgcgg cagcggccaa accaaaccgt
     3181 cggacggaca ttatcgccat atgtcccaag cgatcgtcct tccgcccgat ctgtcctcca
     3241 ccgctttgtc gcttgatgtc ctgaaggcaa ccgccaaggc ggcgaagctg cggtacgttt
     3301 ccgatcgatc gcgcggcatc aggcgcgaac gcagcggtga cagcttcaac tacatcggcg
     3361 tccacggtgc gaagattacc gacgaggaag aactcacccg catccgtaag ctggcgatcc
     3421 cgcccgccta cgagaatgtc tggatctgtg cctttcccaa cggccatctt caggccaccg
     3481 gccgcgatgc gcggggccgc aagcaatatc gttatcatcc gcggtggcgg gcggtgcgtg
     3541 acgagggcaa gtatggcaaa atgctcatct tcggcaaggc tctgccggcc attcgtgccc
     3601 aagtggaacg cgatctctcg aagcgtggtt tgccgcggga gaaggtcctg gcggcgatcg
     3661 tacggctgct ggagggcacc ctgatccgcg tcggcaacga agaatacgcc aagagcaaca
     3721 acagcttcgg cctcacgacg ctgcgtaacc gtcacgtgaa gatcgacggt gacagccgca
     3781 tccgcttcga cttccgcggc aagagcggcg ccgaacacca catcaacctg cacgatcgca
     3841 agctggccgc gatcgttcgg cgctgccatg aacttccggg acaggaactg ttccaatacc
     3901 ttgatggcga agggcagccg cataccgtcg gatcagacga cgtgaacgaa tacctgcgcg
     3961 atatcaccgg ggaagaaatc acggcgaagg actttcggac ctgggccgcg accaatctcg
     4021 ctgcactggc gttgcagcgc ctggagatgt tcgactccca ggcgaaagcg aagaaaaacg
     4081 ttcttcaggc ggtcgaagcg gtggccagga tgttgggcaa tacgcccgcg atctgccgca
     4141 agtgctatat ccatcccgcg atcttcgacg gctatctcga cggcaggctg cttgaagctc
     4201 tcaagcggcg ttcaggtgaa aagctcgccg atccaggtca cgggctgcgc gcggaggaag
     4261 ccgcggtcat cggctttctg gcgcacgaac ttgaaggtat tgctgggaag aaggtgacaa
     4321 cgaacgcaac cggacgataa tggtggtttg ccggaaggca gccgctccgc ttggcgaaac
     4381 cgtcggtaga ggagcgcgcg ataccggacg ctactcgcta actcgttgcg aatccgagcg
     4441 tcggatcgcg ggcgtcgcga tcggcgaaca cggtggcact tttatcgcac cccgcaacgt
     4501 cttgcgctgt acgccgcgac ccggcctcag gtgttcaagc caagcgaagg ttcacgggca
     4561 atgctcgtgc tgttccgcgc tgcgccggca tccgccgcgt cccacatcag gcgagggtcg
     4621 agcacgtgcg cggcgagcat cgacagagca accaccatca ggaacgccag ggtcccgccg
     4681 cccatttcga tatgcgcaag ttgcccgaac tgcatcattg gggcgaagac catgacagtg
     4741 aacgggtcca ggttcgacca ccgcccgacc gtgtcgacca ggttcaggag tcgcgtgcgc
     4801 agccgcagcc gaccggacga acggtagcgt atcgccagca tgcaccagct tagcaccagg
     4861 agcttgccca aggggacgcc gatcgaggtg acgatgatca ggatccccaa tggccagaac
     4921 ccgctggaga acagccgaac gatgcctatc gggatcgaat gcgggtgcgg cgtgccgacc
     4981 ttccataaga tgctcatcgg caggatgtag gaaggcggga tcagcaccca gcttgtcagc
     5041 gtcagtgcca gacagagccg caacgacccc gggcgccggc ggtgcagcgg cgcggcgcaa
     5101 cggggacacg ctcgcccggt ccgggaaccc ggcagcacga gatcgcaggt ggtgcaggcg
     5161 gcgacgtccg gtcccagcgc ctgctccggc atcgccaaat gacgccacac ggcccgcttt
     5221 tccaacgtcg tccgcgtgat cagcgtcagg agagcggttg ccaggaaaca ccagccgccg
     5281 gcgtcgatgg tcacggggat ttggctttgc acacgctccc acccaacgcc gaagccaatc
     5341 gccagcacgt caagcatcgc ccagcggtcg agcagcaggc tgtagcggaa cagccgcccc
     5401 agcaaggcac cgcggaagcc gaggcgaacg gcggtgaggg tgccggccag cagcccgaaa
     5461 taggcgaatg gcagcaaaaa accctgcagc gccagcacca gcgtaaccag cggccaaccc
     5521 tgccgcgccg ctgtcagcaa ccccgaggca aggtgcgtgc tgctggcgat tccggcgaga
     5581 tgcaccgtca tcatcggcag gaaattggcg gggaacagca gcagcaatgt tgtcagggcg
     5641 caagcgagcg gcgcgtccag gccgcggccg cgatgatcct ccagcactat atcgcagacg
     5701 cggcacagga cccgggcccg cggtggcgaa ggcgccacgg tctgcaccgc ggcgcagttc
     5761 gggcaggcca gcaacatgcg gccgccggtg catacggacg tcaaggcagg agcctcgtgc
     5821 cgccgggttc atcccccagc cggtcggtgt agaggcgttt gaccaggacc agggcgacga
     5881 cgcccagcgg ggcacccaag acgaagccaa gcgggccgaa caggccggcg gaaacagaca
     5941 gcgagacgat gataacggcc ggcggcatcc gtaccatgcg ccgctgcacg agcgggccca
     6001 ccacatagcc ctccagcata tggcaaccgg catagatcgc cgccgtccag agcgccgcgc
     6061 tgggcccc
//
LOCUS       DATAVD010001792         4053 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2032232, whole genome shotgun sequence.
ACCESSION   DATAVD010001792 DATAVD010000000
VERSION     DATAVD010001792.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4053
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2032232"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..552)
                     /locus_tag="VHX39_34255"
     CDS             complement(<1..552)
                     /locus_tag="VHX39_34255"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3996261.1"
                     /translation="MDDLTHHHAELGDVRLHYVTMGQGFHVVLLHGWPQSWYEWRHIM
                     PGLAATYRVIAPDLRGLGDSSRPLTGYDKKTVGNDVWRLLQRLNVGEFFLVGHDWGGP
                     TAYAIAAAHPAAVRKLAILDVAIPGDGSPNISQGGRRWHHGFHQTLDLPEALVAGRED
                     IYLGWFFRNYGHRPDVIPDGDIAE"
     gene            663..1466
                     /gene="hpaH"
                     /locus_tag="VHX39_34260"
     CDS             663..1466
                     /gene="hpaH"
                     /locus_tag="VHX39_34260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008491956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018817 - 2-oxo-hept-3-ene-1,7-dioate
                     hydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-hepta-3-ene-1,7-dioic acid hydratase"
                     /protein_id="HEX3996262.1"
                     /translation="MLDSATIDGLARAYHVAEKQRQRTRAPSVLHPGFTTEDAYAVQR
                     AWVSIKIAEGNVVKGHKIGLTSRAMQRASAINEPDYGSLMADMFYETGQEIPMSRFIQ
                     PRLECELGFVMGKRLKGPNCTIFDVLNAVDYVVPAAEIVDGRTHRIDPETNRPRCVLD
                     SIADNAGNAALIVGGRPIRPMEMDLRWVGVLCHRNNVIEESGVAAAVLNHPANGVAWL
                     ANKLAPFDIALEPGQFVLGGSFTATVEAHAGDTFLVDYGPLGTITTRFV"
     gene            1716..>4053
                     /locus_tag="VHX39_34265"
     CDS             1716..>4053
                     /locus_tag="VHX39_34265"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3996263.1"
                     /translation="MADHFDAPMKFGIGQPVRRYEDVRLLTGRGHYQDDNVLPRQAWC
                     IFVRSPYAHARINSIETTAAKEAPGVVAVYTSADYVADGISMPKANMPRKKRDGSPMF
                     APQRPALIGDRVRYVGDPVAMVIAETLAQAKDAAELVAVDYEPLASVTDVAEAAKPGA
                     PVVWDENGDNISHTFERGDKAATDAAFAKAKHIIRRRHTITRVHAQFMEPRGSLGVFD
                     KFEDRYTLYADVNYPHRVRNMLAANVFKVPESQVRVVVNDVGGGFGTKGWQYVDHRLV
                     LWAAKKLDRPVKWRCERSEVIMADEHGRDNVGEIELALDENHKFLGVRLNMLASVGAY
                     IASDRQLLTPFGQIITLTGVYHVPACHVTIDAVLSNTNPTAPYRGAGRPEAIYLMERV
                     IEAAADELGIDAIELRKRNVIQPEQMPYKAPLGQVYDSGTFADNMELALEHGDFAGFP
                     ARLEASRAQGKLRGIALINAIEQAAGPVPEYAEVRFQPSGSALLLMGTKTHGQGHETM
                     YKQILHEKLGTAANEIRFIDGDTDRVAFGMGSNGSRSMVTGGTALTMAAEKLIVKGKK
                     LAAHMLEAAEADIVFADNAFAVAGTDRKVTLKQVAMASFQPARLPKGMEPGFIEHATY
                     APERATYPNGCHVCEVEVDPETGEVDLQRYLVIDDVGTVINPLTLAGQVHGGVAQGVG
                     QVLMEQVVYDRESGQLLSASFMDYAMPRADDLCNISIVSNPSPTPSNPLGAKGGGEAG
                     TVGALPSVMIAILNALAPLGVKELEMPANPSRVWQAIQR"
BASE COUNT          814 a         1172 c         1320 g          747 t
ORIGIN      
        1 ctcggcaatg tcgccgtccg gaatgacatc gggacgatgc ccgtagtttc gaaaaaacca
       61 gccgagatag atgtcctcgc gcccggcaac cagcgcctcc ggcaaatcga gggtttggtg
      121 gaacccatga tgccatcgcc gcccgccctg gctgatgttg gggctgccgt cgccgggaat
      181 ggccacgtcc aggattgcca gtttgcgcac ggctgccggg tgcgccgcag cgatcgcata
      241 ggccgtgggt ccgccccaat cgtggccgac caggaagaat tcaccgacgt ttaatcgttg
      301 caacagccgc cagacgtcgt tgcccacggt cttcttatca taaccggtga gcgggcgtga
      361 cgaatcgccc agtccacgca ggtcgggggc gatgacgcgg taggttgcgg cgaggcccgg
      421 catgatatgg cgccattcgt accagctctg cggccagcca tgcagcagca caacgtgaaa
      481 cccctggccc atggtgacgt agtgcaggcg tacgtcgccc agttcggcgt ggtgatgcgt
      541 gaggtcgtcc atcggtccct cctgtggcgt tattgtgccc cctttgcttt atcgtgattg
      601 acacaggcga gggcggctcg catagccggt tggtcacaaa cttccgggat cgagacgccg
      661 ccatgctcga cagcgccaca atcgatggcc tcgcccgcgc gtatcatgtt gccgaaaagc
      721 agcggcagcg cacgcgggca cccagtgtat tgcatccggg gttcaccacc gaggacgcgt
      781 acgccgtgca acgcgcctgg gtttcgatca agatcgccga aggcaacgtc gtcaaagggc
      841 ataagatcgg cctgacgtcg cgtgcgatgc agcgggcgtc ggcgatcaac gagcccgact
      901 acggctcgct gatggccgac atgttttacg aaaccggtca ggaaatcccg atgagccgat
      961 tcatccagcc tcggttggag tgcgaactgg gatttgtgat gggcaagcgg ctgaagggac
     1021 cgaattgcac gatattcgac gtgctgaacg cggtggacta tgtggtccct gcggcagaga
     1081 ttgtcgacgg aaggacgcac cggatcgatc cggagacgaa ccggccgcgc tgcgtgctgg
     1141 acagtattgc cgacaatgcg ggcaatgccg cgctgatcgt cggcggcagg ccgatccggc
     1201 cgatggaaat ggatttgcgc tgggttggcg tgctgtgcca ccgcaacaat gtcatcgagg
     1261 aatccggcgt tgcggcggcg gtattaaatc atccggcgaa cggcgtggca tggctggcca
     1321 acaaactggc cccgttcgat atcgcgctgg agcctgggca gtttgtgttg ggcggctcgt
     1381 tcacggccac ggtcgaggcg cacgcaggcg acacgtttct ggtggattat ggtccgctgg
     1441 gcacgattac gacgcggttc gtatagatgc cgcgcgaggc cgtgaaacac ccgaccggac
     1501 accacagaat ctgcgtgcat ctgcgttcat cggctgatat ctgcggtttc cttctcttca
     1561 agttggacca gcgaccggct tccggtgtgg taggtgccat gccgcgggcg agaacgcgtt
     1621 aaaccgcaga taaaggccga tgaacgcaga tgcacgcaga tcgtgtaatg gtgcggcgac
     1681 aactcgggtc aggacgatgt gcgagagggt aaggtatggc tgatcatttt gacgcaccga
     1741 tgaaattcgg cattggacaa ccggtccggc gttacgagga tgtgcggctg ctgaccggtc
     1801 gaggacatta tcaggacgat aacgtgctgc cgcggcaggc ctggtgcatt tttgtacgtt
     1861 caccgtacgc gcatgcccgg attaacagta tcgaaacgac ggcagcgaaa gaggctccgg
     1921 gggtcgtcgc ggtctatact tccgcggact atgtcgctga cggcatcagc atgccgaaag
     1981 ccaacatgcc gcgaaagaag cgcgacggtt cgccaatgtt cgccccgcag cgcccggcgc
     2041 tgatcggcga tcgcgtgcgt tacgtcggcg atccggtggc gatggtgatt gcggaaactc
     2101 tggcgcaggc caaggacgcg gccgaactgg tggcagtcga ttatgagccg ttggcctccg
     2161 tcaccgacgt cgccgaggca gcgaagcccg gcgcgccggt ggtgtgggat gaaaacggcg
     2221 acaatatctc ccatacgttc gagcggggcg acaaagcggc aaccgatgcg gcctttgcca
     2281 aagccaaaca tatcatccgc cgccgccaca ccattacgcg ggtgcacgcc cagtttatgg
     2341 aaccgcgggg ctcgttgggg gtgttcgata agtttgagga tcgttacacg ctctatgccg
     2401 atgtgaatta tccgcaccgg gtccgcaaca tgctggcggc caacgtgttc aaagtgccgg
     2461 agagccaggt gcgcgtcgtg gtcaacgatg tgggtggcgg cttcggcacc aagggctggc
     2521 aatatgtcga tcatcgcctc gtgctgtggg cggcgaaaaa actcgaccgg ccggtgaagt
     2581 ggcgctgcga acgttccgaa gtcatcatgg ccgacgagca tggccgcgac aatgtcggcg
     2641 agatcgaact ggcactggac gaaaaccata aattcctcgg cgtgcggttg aacatgctgg
     2701 ccagcgtcgg cgcctatatc gcgtccgacc ggcagttgct gacgccgttc ggacagatca
     2761 ttacgttgac tggcgtgtat catgtgccgg cgtgccacgt aacgatcgac gcggtgctgt
     2821 ccaacaccaa tccgaccgca ccctatcgcg gcgccggccg gcccgaggcg atctatctga
     2881 tggagcgcgt catcgaagct gcggcagacg agcttggcat cgatgccata gagttgcgca
     2941 aacgcaatgt catccagccg gagcagatgc cgtataaggc accgctgggt caggtctacg
     3001 acagcggcac gtttgcagac aacatggagc tggcgcttga acacggcgac ttcgccggtt
     3061 tccctgcgcg tctcgaggca tcccgcgcgc aaggaaaact gcgtggcatt gcccttatca
     3121 acgcgatcga gcaggccgct gggccggtgc cggaatacgc cgaggtccgg ttccagccaa
     3181 gcggctcagc cttgttgctg atgggtacca aaacccacgg ccagggccac gagacaatgt
     3241 ataagcaaat cctgcacgaa aaactcggca ccgccgccaa tgaaattcgt ttcatcgatg
     3301 gcgacaccga ccgggtggca ttcggcatgg gctcgaacgg gtcacgatcg atggtcaccg
     3361 gcggcacggc gctgaccatg gcggccgaga agctgatcgt gaaggggaag aaactcgcgg
     3421 cacatatgct ggaagcggcg gaggcggaca tcgtattcgc cgacaatgcg tttgccgtcg
     3481 ccggcaccga ccgcaaagtt acgctgaaac aggtggcgat ggcttccttt caaccggctc
     3541 ggctacccaa aggcatggag cccggcttca tcgagcacgc gacctatgca ccggaacgtg
     3601 cgacttatcc aaacggttgc catgtctgcg aggttgaggt cgatcctgaa accggcgagg
     3661 tcgatctgca gcgctatctg gtgatcgacg atgtcggcac cgtgatcaat ccgttgacgt
     3721 tggccggcca ggtgcacggc ggtgtggcgc aaggtgtcgg tcaggtgctg atggaacagg
     3781 tggtctacga tcgagagtcc gggcaactgc tcagcgccag cttcatggat tacgcgatgc
     3841 cgcgagcgga tgatctgtgc aacatttcga tcgtcagcaa cccctcgcca acgcccagta
     3901 atccgttggg cgccaagggc ggcggcgaag cgggaacggt tggcgcattg ccttcggtga
     3961 tgatcgcgat cctcaacgca ctcgctccac tgggcgttaa ggaactggaa atgccggcca
     4021 acccgtcgcg ggtgtggcag gcgattcaac gcg
//
LOCUS       DATAVD010001793         1714 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_355298, whole genome shotgun sequence.
ACCESSION   DATAVD010001793 DATAVD010000000
VERSION     DATAVD010001793.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_355298"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1714)
                     /locus_tag="VHX39_34270"
     CDS             complement(<1..>1714)
                     /locus_tag="VHX39_34270"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX3996264.1"
                     /translation="GVGKSRLCFEFGEWCRRRRVPVLEARAHVLGQATPLLPMVELLR
                     ASLRITPEMEPEEARQRIAERLWELEPSLADGLPLLADFLNVADPDVPLPSLDPRTRQ
                     ARLREIITRMIKAGGRRPGVIIVEDLHWLDEASRESVEYLVEELRGTKIFLVVTFRPP
                     LSLPWSSQTKYRELRLAELAAGDMRHVVRDLMGDAPALDQAVARVADQSGGNPFFAHE
                     LVLSLAQSGVLVGSRGQYRLGPSGWDNPALPATVEAVVGARIDRLGEPQKQLLQIGAV
                     VGKDFPLEVVRAVANIAESALQPLLDQLCAAELIQPCMTPAGASFAFRHPLIQEVGYA
                     MQLRSRRTPLHAAVADVIGRFDWGLRDESSGLLAHHYEASGQMLEAAMHLQRAARWIG
                     RTNSARALADWKKVRRLMQDQPRSRDNDQLRALASGQLLSFGWREGMAADEAKLYAEE
                     ALGFARESGDRQHELSILGAYGRIMAAGGKADDYVRLVREALALTEPGVNPESDLLLN
                     GLLCQACTRAGLMREALAANDAALQAIDIPGNPNTGAVLGHSLEQRVGFNVAHWVRCL
                     RAYPL"
BASE COUNT          344 a          611 c          490 g          269 t
ORIGIN      
        1 cagcgggtat gcccgcaggc aacgaaccca gtgggcgacg ttaaagccaa ccctctgctc
       61 aaggctatga cccaggacgg cgccggtgtt gggattgccc gggatgtcga ttgcctggag
      121 tgccgcatcg ttcgccgcca gcgcttcgcg catcagccca gctcgagtgc aagcctgaca
      181 cagtaagcca ttcagcaaca aatcgctttc cgggttgaca cccggctcag tcaacgcaag
      241 cgcttcacgc accagcctca catagtcgtc ggccttgccg cccgccgcca tgatccgtcc
      301 ataggcgcca agaatgctca actcgtgctg acggtcaccg gattcccgcg caaaacccaa
      361 cgcttcttcg gcataaagtt tggcctcatc ggcggccatc ccctcgcgcc agccaaacga
      421 cagcagctgt ccactcgcca aagcccgcaa ctgatcgttg tccctggacc gcggctgatc
      481 ctgcatcaac cgccgcacct tcttccaatc cgccaacgcc cgcgccgaat tggtccggcc
      541 gatccaccgc gcagcgcgct gcagatgcat cgcagcctcc agcatctgcc cggacgcctc
      601 gtaatgatgt gccagcagac cggaggactc gtcacgcagg ccccaatcga agcgcccgat
      661 gacatcggca acagccgcat gcagcggtgt ccgtctggag cgcagctgca tcgcgtagcc
      721 gacctcctgg atcagcggat ggcggaatgc aaagctcgca ccggcggggg tcatgcacgg
      781 ctggatcagt tccgcggcac agagctgatc gagcagtggt tgcaatgccg actcagcgat
      841 gttggcgacc gcgcgcacca cctccagcgg aaagtccttg ccgacgacgg ccccaatctg
      901 cagcaactgc ttttgtggct cgcccagtcg atcgatgcgg gcgccgacga cggcctcaac
      961 agtggccggc agggccgggt tgtcccagcc ggacgggcca agccgatact ggcctcgact
     1021 gcccacgagg acgccgctct gcgccagtga cagcaccaac tcatgggcaa aaaatggatt
     1081 cccgcccgac tggtccgcga cacgggccac cgcctggtcg agcgccggtg cgtcacccat
     1141 cagatcgcgc accacatgcc gcatatcgcc ggccgccagc tcggccaaac gcaactcgcg
     1201 gtatttggtt tgtgacgacc agggcaacga aagaggcggg cggaacgtga ccaccagaaa
     1261 gattttggtg ccccgcaact cctcgaccaa atactccacg gactcccggc tggcctcgtc
     1321 caaccaatgc agatcctcaa cgatgatcac gcccggccgc cggccgccgg ccttgatcat
     1381 gcgggtgatg atctcccgca aacgcgcctg ccgggtgcgc ggatcgagtg acggcaacgg
     1441 cacgtccgga tccgcaacat tcaaaaaatc ggcaagcagc ggcaggccat cagcgagtga
     1501 cggttcgagc tcccacagcc gttcggcaat tctttggcgt gcctcctccg gctccatttc
     1561 gggagtgatg cgcagggagg cccgcaaaag ctcaaccatc ggcagcaacg gcgtggcctg
     1621 acccagtacg tgcgcccgcg cctccagcac cggcacgcgc cgccttcggc accattcgcc
     1681 aaattcgaaa caaaggcggc ttttgccgac cccg
//
LOCUS       DATAVD010001794         5407 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3330058, whole genome shotgun sequence.
ACCESSION   DATAVD010001794 DATAVD010000000
VERSION     DATAVD010001794.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5407
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3330058"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            92..535
                     /locus_tag="VHX39_34275"
     CDS             92..535
                     /locus_tag="VHX39_34275"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HEX3996265.1"
                     /translation="MRKYLRPLWHRADGGAAVEFGIVFPFFSILLLGIVEYGMVPFQI
                     MNVSYAAQVGAQYAMLNGYNATNIQNAVAAASNIPAGSVTVSETCGCANGTALVAERC
                     VQPPLTCANGQPAGAYVTVTVSQPYSPIAPGIPSPLTAATMVRVQ"
     gene            535..993
                     /locus_tag="VHX39_34280"
     CDS             535..993
                     /locus_tag="VHX39_34280"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HEX3996266.1"
                     /translation="MCGATSYFAATFRRLATCRNGGTAVETAIVLPVLMLAIVGAIME
                     GWMLYSTNMLFFAVESAARCAAVNTTTCGGTTPAKQIAAIQAYAVTQSWGLNVTPASF
                     QVTTGNTCGVQVTGNYPFTFVMPFLTFFTPAAGSNAPTYNIVANACFPVD"
     gene            1049..2245
                     /locus_tag="VHX39_34285"
     CDS             1049..2245
                     /locus_tag="VHX39_34285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996267.1"
                     /translation="MDMKVHYTSITIAAVLRSTATQALLELALAPTMLLRAQVLDDFD
                     LATLKALHGDVIFLDVDTANSKQMRTLALFMSEVDTGSVVVTSANLDVASMREFMRIG
                     LTDVLPQPFVGEDVDNALQAAAGRRRATAMTPVDDDDQHRGLVISFIKSGGGVGATSL
                     VVQGAAAVGREKNPPSQCVLDFDIQFGAAALQMDAEQRVSVIDLARDLKRLDGALLRG
                     AMVRPHQRFDLLAAPSSIFPVGDLDVDAVATILEVARREYGQVLVDLPTLWSDWVLAT
                     LANSDVIVLVVQLTVPSLRQAKHQIEMLQTEHLDHIPLVVVANRTATGLFGSKDLPLK
                     NAAKALGHEIDHTVPNDPAMRLAADAGRPLNEIRAGNSLEKKLRLMVRAIAGKASVSH
                     IEPRRA"
     gene            2248..3624
                     /locus_tag="VHX39_34290"
     CDS             2248..3624
                     /locus_tag="VHX39_34290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HEX3996268.1"
                     /translation="MLASRFSNRPKPVPEPVTRPLAILPPAAPAGAVNTDFLDLKVRL
                     HQSLLDEINLSVIERMPKEQFVSEVGDIIRELLANETTPLNERERKQIVKDVLDEVMG
                     LGPLEPLLHDDTTDDILVNTFDKVYVERHGRLELTPVRFQDNTHLLRIINKMVAAVGR
                     RVDESQPVVDARLADGSRINAVLPPVAVDGPLLSIRKFAKRPFDLDLLIENGTITADM
                     AVMLQGMVRGKISVLISGGTGSGKTTMLNALSKAIDPRERIVTIEDAAELQLQQPHVA
                     RLETRPPNADGRGEITQRDLVKNALRMRPDRIILGEVRADEAFDMLQAMNTGHEGSMS
                     TIHANSPRDAITRLEQVIGMAGLEMSPRTIRSQIVSAIQVVMQLARWTDGKRRLISMQ
                     EMAGMEGDVPTMNEILRFVRTGTDANGNIHGHYEWKGIRPRFVEQLESMGIVLPNSLF
                     MSHRRAAE"
     gene            3635..4615
                     /locus_tag="VHX39_34295"
     CDS             3635..4615
                     /locus_tag="VHX39_34295"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX3996269.1"
                     /translation="MIWSVLPYAAAAIAGVALVEGIYYLFFDSTGRVRRQVDQRLLAP
                     GRNAEQAAAAELLRRRPYTFGMPAWLARLFTTSPIRWFDNLVISSGMGGSPDKVMLWM
                     TIVSAVILVALSFSLHWPFLWCLGAGVILGVALSIWFLIQIRRRRLAQISNQLPDALD
                     MLVRSLRAGHPVSTGIGMIAEEMPDPIGGEFAMVYDEMSYGLDLRQALEKMGDRLQHH
                     VIDYLIVAMRVQYGTGGNLAEILSSLSDVLRERLRLQGKVKALSAESRLSGRILSILP
                     VAVVVLLAYINPHFYDDAWTNSTLASVLMGAGALLVLGILLLRHFVNSIR"
     gene            4627..>5407
                     /locus_tag="VHX39_34300"
     CDS             4627..>5407
                     /locus_tag="VHX39_34300"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEX3996270.1"
                     /translation="MGIFGNLDDFSRYIPYVLMVLASTFAVFGIAILLAPDDRARRLA
                     GTLIRRDSGNLSIRRNGSALERLVTRPFAARFAPSNERERSSLKLWLLQAGYDSPQAI
                     QTYYGFRVCFAMVLTPIAVVASTVLLPGYGAGLYFALTIVAALVGFMFPVYWVRHRRN
                     ARQQQVRDGLPDVLDLLLVCTEAGLGLDTAIARVGEEMAKAQPILASLLMQVSAELLA
                     GRPRAEAMRNLSVRANVDRVTSLVNLLLQSDLLGSSMAATLR"
BASE COUNT         1030 a         1559 c         1644 g         1174 t
ORIGIN      
        1 cctcgccttc atcaacgacc agtgtcaggg caccggtgtt gcgacgatcg gtggcggcgg
       61 tgccgtcacg ttggtggaat aggaacgcgc catgcgcaaa tacctcaggc cgctatggca
      121 ccgggccgat ggaggagccg ccgtcgagtt cggtatcgtg tttccgtttt tctcgattct
      181 gcttctcggc atcgtcgaat atggcatggt cccgtttcag atcatgaatg tgagttacgc
      241 ggctcaggtc ggcgcgcagt acgccatgct caatggttac aatgccacga acatccagaa
      301 cgcggtcgcc gcggcgtcga acattcccgc cggcagcgtc acagtctcgg agacctgtgg
      361 ctgtgcgaac ggtaccgcgt tggtcgcaga acgttgcgtg cagccgccgc tcacgtgcgc
      421 caatggccag cccgccggag cgtatgtcac cgtcacagtt tcacaacctt attcgccgat
      481 cgcccccggg atcccctccc cgctgaccgc ggcgacaatg gtccgtgtcc aataatgtgc
      541 ggagcgacct cctatttcgc ggccacgttc cggcgccttg ccacctgccg gaatggtgga
      601 accgcggttg aaacggccat cgttttgccg gtgctgatgc tggcgatcgt tggggcgatc
      661 atggaaggtt ggatgctcta ctcaaccaac atgctgttct ttgcggtaga gtcggcagcc
      721 cgttgcgccg ccgtcaacac aaccacgtgc ggcggcacga ccccggccaa acagatcgcg
      781 gccatccagg cctatgccgt aacccagtcc tgggggctca atgtgacccc ggcaagtttc
      841 caggtgacca cagggaacac gtgcggagtg caggtgaccg gcaactaccc tttcacgttc
      901 gttatgccgt tcctcacgtt ttttacgcca gcggccggca gcaacgctcc gacctacaat
      961 attgttgcaa atgcttgctt tccggttgat tgatgatgat tatcgttcct cccgctgcga
     1021 cttgcgttgc tactgatcga ggtacccgat ggatatgaag gtgcattaca cgagcatcac
     1081 gatcgcagcc gtattgcgct cgactgcgac gcaggccttg ctcgagcttg cccttgcccc
     1141 aacgatgtta ttgcgcgccc aggtgttgga tgatttcgat ttggcgaccc ttaaggcact
     1201 tcatggcgat gtgattttcc tggacgtcga taccgcaaat tcaaagcaaa tgcggaccct
     1261 ggcgctgttc atgagcgagg tggacactgg atcagtcgtc gtcacatccg ccaacctcga
     1321 tgtcgcgagc atgcgcgaat tcatgcgcat tgggttgacc gatgtgctgc cgcaaccctt
     1381 tgtcggcgag gatgtggaca acgccctcca ggccgctgcc ggccggcgcc gtgccaccgc
     1441 aatgacaccg gtcgacgacg atgaccagca caggggattg gtgatcagct tcatcaaaag
     1501 cgggggtggt gtcggggcga caagtctggt tgtgcaaggc gctgctgcgg ttggccgcga
     1561 gaagaacccg ccgtcgcagt gtgtactcga cttcgacatc cagtttggtg cagcggcgct
     1621 gcagatggac gccgagcagc gggtcagcgt catcgatctg gcgcgcgacc tcaaacgcct
     1681 ggatggcgcg ttgctgcgtg gcgccatggt gcggccacac cagcgctttg atttgctggc
     1741 tgcgccttcc agcattttcc ccgtcggcga tctggatgtg gacgccgtgg caacgatcct
     1801 ggaagtggcg cggcgcgagt atggccaggt tctggtcgac ctaccgacgc tctggtcgga
     1861 ttgggttctg gccacgctgg cgaattccga cgtgatcgtg ctggtcgtcc aactcacggt
     1921 accgtcgctg cgtcaggcaa aacatcagat cgagatgctg cagaccgagc acctcgatca
     1981 cattccgttg gttgtggtgg cgaaccggac cgcgacaggt ttgtttggat caaaagacct
     2041 tccgctaaag aacgccgcga aggcactcgg tcatgagatc gaccataccg ttccgaacga
     2101 tccggccatg cggttggccg ctgacgccgg tcggccgttg aatgaaattc gcgcagggaa
     2161 ctccctggaa aagaaactcc gattgatggt tcgcgcgatc gcggggaaag caagtgtgtc
     2221 gcatattgaa ccgaggagag cgtaattatg ctggcatctc gatttagcaa ccgcccgaaa
     2281 cccgtccccg aaccggtcac ccggccgctt gcgatcctgc cgccggctgc gccggctggc
     2341 gccgtcaaca cggatttcct ggatctgaaa gtccgcctgc accaaagcct gctggacgaa
     2401 atcaatctga gcgttatcga gcgcatgccg aaggagcaat ttgtttcgga agtcggcgat
     2461 atcattcgcg agttgttggc gaacgaaaca acgccgttga atgaacgcga acgtaagcag
     2521 atcgtcaaag acgtactcga tgaggtcatg ggcctcggcc ctttggagcc gctgctgcac
     2581 gacgacacca ccgacgacat tttggtcaat actttcgaca aggtttatgt cgagcgacat
     2641 ggcagacttg aactcactcc ggtccgcttc caggacaata cgcatttgct gcggatcatc
     2701 aataaaatgg tcgcagccgt cggtcgccgg gtcgatgaga gccagccggt cgtcgacgcc
     2761 cgtctggcgg atgggtcgcg tatcaacgcc gtgctgccgc cggtcgcggt tgatggcccg
     2821 ctgctgtcga tccgtaaatt cgccaagcgt ccgttcgacc ttgatttact gatcgaaaac
     2881 ggaacgatca ccgccgatat ggcggtcatg ctgcagggta tggtgcgcgg caaaatatcg
     2941 gttttgattt ccggcggcac cggttccgga aagacaacga tgctcaatgc cttgtcgaag
     3001 gcgatcgacc cgcgggagcg aattgtcact atcgaagacg ccgccgaatt gcaattgcag
     3061 cagccgcatg tcgcgcgcct cgaaacgagg ccgcccaacg cagatggcag gggcgaaatc
     3121 acccagcgtg acctcgttaa gaatgcgctg cggatgcgcc ccgaccgtat catcctcggc
     3181 gaggtgcgag ccgacgaagc cttcgacatg ttgcaggcaa tgaacacggg ccatgaaggt
     3241 tcgatgtcga ccatccatgc caattcgccg agggatgcaa tcacccggtt ggaacaggtg
     3301 atcggcatgg cgggtctcga gatgtcacca cgcaccatcc gatcgcaaat cgtgtcggcc
     3361 atccaggttg tcatgcaact ggcccgttgg accgatggca agcgccgcct catcagtatg
     3421 caggagatgg cgggcatgga aggtgacgtc ccgacaatga acgaaattct acgctttgtc
     3481 cgcacgggca cagacgcaaa cggcaacatc cacggccatt acgagtggaa gggtattcgc
     3541 ccgaggtttg tcgagcagct tgaaagcatg ggtatcgtac tgcctaacag cctgtttatg
     3601 tcgcaccgac gggcagctga gtagggagca tgccatgatc tggtccgtac tgccttacgc
     3661 tgccgccgca atcgccggcg tagccttggt cgagggcatt tactacctgt ttttcgactc
     3721 gaccggacgc gtgcgccgcc aggttgatca gcggttgctt gctcccgggc ggaatgcgga
     3781 acaggctgca gctgcggaat tgctccggcg acggccttac acctttggca tgccggcctg
     3841 gctggcgcgg ctgttcacca catcaccgat ccgttggttt gacaatttgg tgatcagcag
     3901 cggcatgggc ggatcgccgg acaaagtcat gctgtggatg acgattgttt ccgcagtgat
     3961 cctcgttgcg ctgtcgttct ctttgcattg gccatttctg tggtgcctcg gggcgggcgt
     4021 catcctcggc gtggcgcttt ccatctggtt tcttattcag attcgccgcc gcaggctggc
     4081 gcagatcagc aatcaattgc cggacgcgct cgatatgctg gttcgctcgc tccgtgcggg
     4141 ccatccggtt tcgaccggaa tcggcatgat cgcggaggag atgccagacc cgatcggcgg
     4201 ggaattcgca atggtgtacg atgagatgtc ctatggtctc gatctacgcc aggccctgga
     4261 gaaaatgggc gaccgtctgc aacatcacgt aatcgactat ttgatcgtgg ccatgcgggt
     4321 gcagtacggg accggtggca acctcgcgga gattctaagc tcgctgtctg acgtcctgcg
     4381 ggagcggttg cgactacagg gcaaggtcaa ggccctgtca gcagaatccc gcctgtcggg
     4441 caggatactg tcgatcctac cggtcgcggt cgtggtactg ctggcataca tcaatccgca
     4501 cttttacgac gatgcctgga caaatagcac gctcgccagc gttctgatgg gcgctggggc
     4561 actgcttgtt ctggggattc ttctgttgcg tcatttcgtg aacagtatcc gctgagggag
     4621 cgtccgatgg gaatttttgg caacctggat gacttcagcc gttatatacc ttacgtgttg
     4681 atggtacttg ccagcacgtt tgcagtgttc ggcatcgcga tattgctcgc acctgatgat
     4741 cgcgcccggc gtctggcggg cacgttaatt cggcgcgaca gtggcaacct gagcattcgg
     4801 cgcaatggct ctgcactcga acgattggtt actcggccgt tcgccgcacg cttcgcgccc
     4861 tccaacgaac gtgaaagaag cagcctgaag ctgtggctgc tccaggccgg atatgattca
     4921 ccgcaggcga tacaaaccta ttacggattc cgcgtgtgtt tcgccatggt tttgacaccg
     4981 atcgcggttg ttgcttccac ggttcttttg ccagggtacg gcgctgggct gtattttgct
     5041 ctgacgattg ttgcagcgtt ggtaggtttc atgttcccgg tatattgggt gcgtcaccgc
     5101 cgaaatgcga ggcagcagca ggtcagggac ggcctccctg acgtattgga tttgctgctg
     5161 gtttgtaccg aagccggtct agggctcgac acggcgatcg cccgggtggg tgaagaaatg
     5221 gccaaggcac aacccatcct ggcgagcctc ctcatgcagg ttagcgcgga gttgcttgct
     5281 ggacgtccgc gcgccgaggc gatgcgtaat ctgtcggtac gggcgaatgt ggaccgcgtc
     5341 acttcgctgg ttaatttgct gctccaatcc gatctgctcg gcagcagcat ggccgcgacg
     5401 cttcgag
//
LOCUS       DATAVD010001795         1820 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_174168, whole genome shotgun sequence.
ACCESSION   DATAVD010001795 DATAVD010000000
VERSION     DATAVD010001795.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174168"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..938
                     /locus_tag="VHX39_34305"
     CDS             <1..938
                     /locus_tag="VHX39_34305"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3996271.1"
                     /translation="PAGLRAAFHALWRREYRQIEAVADVSFALRAGEIVGFIGPNGAG
                     KTTTMKILSGILHPTAGRAAVLGFSPQRRQYAFLRQIALVRGSQPIGGPTELTVRDNF
                     NYRRLLYDVPRSRFEANVDELTDMLDLAPLLVRQLRALSLGERMRAGLAVALLHRPRV
                     LFLDEPTIGLDATAAAAFRRYIATYATRAGATVLLTSHYMTEVEALCPRVILIDQGHP
                     RYDGALAALAARLSPYKLLRVTTVDSDRAVAWDRYGERELDSADTNQVTLRVPRQDAA
                     RITGRLLTEVPVADLTVADPPLETVMDRFYRAGVA"
     gene            935..1705
                     /locus_tag="VHX39_34310"
     CDS             935..1705
                     /locus_tag="VHX39_34310"
                     /inference="COORDINATES: protein motif:HMM:NF017946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 family transporter protein"
                     /protein_id="HEX3996272.1"
                     /translation="MSRILRLIGLSIWRSSLGQWSWRSFLITLVIGQAVTPLLGLFVW
                     SAVLPGNSAVSTYYVALLAVQLMTVSYEHHTVSNGIYDGTFANNLAYPQPVVIDILGA
                     NIGLRMWHLIFGMPLIVIAALLAGVQVNAGAVALAVPAVLLAAGVRFFFTYILALSAL
                     WTERAHGVVNLGETVIFLLGGVAAPLSFLPGSIRDVGQILPFWSMLGMPAEIASGALH
                     GSPLVRAYALQLGWFAVLAVFSAMIWRTGLRRFSAVGA"
BASE COUNT          268 a          554 c          608 g          390 t
ORIGIN      
        1 gtccggccgg gctccgggcg gcattccacg cgctgtggcg acgggagtat cggcagatcg
       61 aggcggtggc cgacgtgtca tttgccttga gggcaggtga gatcgttggg tttatcggcc
      121 cgaacggggc cggtaagacc accacgatga agatcctctc gggcatcttg catcccacgg
      181 ccgggcgggc cgcggtgctg ggattttcac cgcagcggcg ccagtacgca ttcttgcgac
      241 agattgcgct ggtgcgcggc agccaaccga tcggcgggcc gaccgagctg acggtgcggg
      301 acaacttcaa ctaccggcgg ctgctgtacg acgttccgcg cagccgattc gaggccaacg
      361 ttgatgagct gaccgacatg ttggatttgg cgccactgct ggtacggcaa cttcgggcgt
      421 tgagcctggg agaacggatg cgcgccgggc tggcggtggc gctgttgcac cgaccccggg
      481 tcctgttcct ggacgagccc acgatcgggc tggacgccac ggcggcagcg gcatttcggc
      541 gctatatagc gacctatgcg acacgggccg gcgcgaccgt gttgctgacc agccattaca
      601 tgaccgaggt ggaagcgctg tgcccgcgcg tgatcctgat tgaccagggc cacccgcgtt
      661 atgacggtgc gctggccgcg ctcgcggcgc ggctctcgcc gtacaagctg ctgcgagtga
      721 ccactgtgga cagtgatcgg gcggtggcat gggatcgata tggggaacgt gagctggact
      781 ccgccgatac aaatcaggtt acgttgcggg ttccccggca ggacgcggcg cggatcaccg
      841 gtcgcctgct gaccgaggtc cccgtcgccg atctgacggt ggcggacccg ccgctggaga
      901 cggtgatgga tcggttctat cgcgccggcg tcgcatgagc aggattctgc ggctgatcgg
      961 tctgtccatc tggcgcagct cgttgggtca gtggagctgg cggtcgttcc tgatcacttt
     1021 ggtgatcggt caggccgtca ccccgctact cggcctgttc gtctggtccg ccgtactgcc
     1081 cggcaattcg gcggtctcca cgtattacgt tgcgctgctc gccgtgcagc tgatgacggt
     1141 ctcgtacgag caccacaccg tctccaacgg catctacgac ggcacattcg ccaacaacct
     1201 cgcctatccg caaccggtcg ttatcgatat cctcggtgct aatatcggcc tgcgtatgtg
     1261 gcatctgatc ttcggcatgc cgctgatcgt gatcgcggct ctgttggcag gtgttcaggt
     1321 caatgccggc gcggtcgcat tggccgtacc agcggtgtta ctggccgccg gagtgcgttt
     1381 ctttttcacc tacatccttg ccctgtcggc gctgtggacc gaacgcgcgc acggcgttgt
     1441 gaacctcggc gaaaccgtga tcttcctcct tggcggtgtc gctgcaccat tgagtttcct
     1501 tccaggctcg atccgtgacg ttggtcagat actgccgttc tggtcgatgt tgggaatgcc
     1561 tgcggagatc gcgagcggag cccttcacgg gtcgccgctg gtgcgggcct acgcccttca
     1621 gctcggctgg ttcgccgttc tcgctgtgtt cagcgcgatg atctggcgga ccgggctacg
     1681 ccgtttcagc gccgtcggcg cataggagga aatccgatgc tgaaattgat ccgcctgttc
     1741 ggtgctctgt tttcgatgtc actgcgcagc caggtcgcgt tccgtgcgga tctgatcttc
     1801 gagatcgtgc tgacgatcgt
//
LOCUS       DATAVD010001796         2896 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2776536, whole genome shotgun sequence.
ACCESSION   DATAVD010001796 DATAVD010000000
VERSION     DATAVD010001796.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2896
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2776536"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..1274
                     /locus_tag="VHX39_34315"
     CDS             120..1274
                     /locus_tag="VHX39_34315"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3996273.1"
                     /translation="MFELPEEQRMLQELVAKFIDRDVIPLEKGVLAREMSGQKSGLPT
                     EDEEKLLATCKELGLWGLDVPEEYGGANLPYAALVGVYEEQGRTCVPFTFPPDSPNLH
                     MLIAVANDEQRTKYLDPYARGEAHSCIAISEPGAGGDPAGMTTRAVKDGTDWVINGRK
                     IWVSRVPQADFIILMARTGEGKRADGVTAFIVEKGTKGFIIEREIPMIGGQRTYELVF
                     EDCRIPAKQVLGIEGKGYAPMQLRLTVRRLQMGAWCIGMARRALDMMVEHTKQRVTFG
                     QRLADRQAIQWWIADAAMKIHACRLMVYDAATKADAGKDVRTEASMVKLYGTEMATEV
                     IDHAMQSFGAMGVAKELPLQLMAQKVRTMRVYEGPSEVHRMAIARRIIGR"
     gene            1271..1621
                     /locus_tag="VHX39_34320"
     CDS             1271..1621
                     /locus_tag="VHX39_34320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1491 family protein"
                     /protein_id="HEX3996274.1"
                     /translation="MTLEPTATPRIKAGIWVSMALRMGNADGRFGAVIRKGDPDAGGV
                     LVVLRGREGLSVLSQLRSAEGELAWMRATGPTPVDDPTADAYIARQVKFDPDLWVIEF
                     ESPDLLPPFEAKLV"
     gene            1690..2094
                     /locus_tag="VHX39_34325"
     CDS             1690..2094
                     /locus_tag="VHX39_34325"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX3996275.1"
                     /translation="MPDIKGSCRCGKVSYASSADPVFVGICHCRSCQKSTGSAYGTVV
                     AVPTAALTVTGTTKSFDDTSDNGNPTHRAFCPECGSTITQTADVMAGLTMIPVGTLDE
                     PRSVNPAMQIFCDSALPWSTIAGMQSFPRMPG"
     gene            2281..2460
                     /locus_tag="VHX39_34330"
     CDS             2281..2460
                     /locus_tag="VHX39_34330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996276.1"
                     /translation="MNNGNFWSDYADAMELSVEGNRLIAQEIVELAGGLWNKAIRSLD
                     RALQNVGQHPHLPPI"
     gene            complement(2470..>2896)
                     /locus_tag="VHX39_34335"
     CDS             complement(2470..>2896)
                     /locus_tag="VHX39_34335"
                     /inference="COORDINATES: protein motif:HMM:NF024591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HEX3996277.1"
                     /translation="GGYVGDTEASAAVFRDGWFYCGDIGSVSPDGLLTITGRDGDFIN
                     AGGNKVSPVVIENVLLSLPQVTDAAAFGVPDRMGVVQIWAAIVSATPVDMAALQALCR
                     AKLADKAPKFILQIKGLPRNANGKIVRTELVRFASQRQP"
BASE COUNT          583 a          977 c          849 g          487 t
ORIGIN      
        1 tggcgggcgc aggcccgcca tccacgcctc tcgctgtatg gacaaagacg tggttgctaa
       61 tggcgtcggc atctccatca ggtgcgttct cgcgccgccc gtagacagga aacgccttga
      121 tgtttgaact ccccgaagag caacggatgc tccaggaact cgtcgcgaaa ttcatcgacc
      181 gcgacgtcat cccgttagaa aagggtgtcc tcgcccgcga aatgtccggc cagaaatccg
      241 gcctccccac ggaggacgaa gaaaaactcc tcgccacctg caaggaactc ggcctctggg
      301 gtctcgacgt gccggaggaa tacggcggcg ccaacctgcc ctatgccgca ctcgtcggcg
      361 tctacgaaga acaaggccgc acctgcgtcc cgttcacctt cccgcccgac agccccaacc
      421 tgcacatgct gatcgccgtc gccaacgacg aacagcgcac caaatacctc gatccctacg
      481 cccgcggcga agcgcactcc tgcatcgcca tctccgaacc gggcgccggc ggcgaccccg
      541 ccggcatgac cacgcgcgct gtgaaggatg gcaccgactg ggtcatcaac ggccggaaaa
      601 tctgggtcag ccgcgtcccg caggccgact tcatcatttt gatggcccgc accggggagg
      661 gtaaacgtgc cgacggcgtc accgccttta tcgtggaaaa aggcaccaag ggcttcatca
      721 tagagcgcga aattccgatg atcggcggcc agcgcaccta cgagctggtg ttcgaggact
      781 gccgtatccc ggcgaaacag gtcctcggca tcgagggcaa aggctacgcc ccaatgcagc
      841 tacgcctcac cgtccgccgc ctgcaaatgg gtgcctggtg catcggcatg gccagacgcg
      901 cgctggacat gatggtggaa cacaccaagc agcgcgtcac cttcggccag cgcctcgccg
      961 accgccaggc catccaatgg tggatcgccg acgccgcgat gaaaatccac gcctgccgcc
     1021 tgatggttta cgacgccgcc accaaggccg acgccggcaa ggacgtccgc accgaggcgt
     1081 ccatggtgaa gctctacggc accgaaatgg ccaccgaggt catcgaccac gccatgcagt
     1141 cgttcggcgc catgggcgtc gccaaggaac tgccgcttca actgatggcg cagaaggttc
     1201 gcaccatgcg cgtctacgaa ggcccgtcgg aggtccaccg gatggccatc gcccgccgca
     1261 tcatcggccg atgaccctgg agccgaccgc gacgccccgc atcaaggcgg gcatctgggt
     1321 cagcatggca ttgcgcatgg gcaacgccga cggccgcttc ggcgcggtga tccgcaaggg
     1381 cgatccggac gccggcggtg tgctggtcgt cctgcggggc agggagggcc tgtccgtcct
     1441 gtcccaactg cgctccgccg agggcgaact cgcctggatg cgcgcgaccg gtcccacccc
     1501 ggtcgacgac cccaccgccg acgcctacat cgctcggcag gtgaaattcg accccgacct
     1561 gtgggtcata gagttcgagt cccccgatct gctgcccccg ttcgaagcaa aactcgtgta
     1621 acgtatgctg gatatcaggg taaaatcgtg acaagctgat cccacaagaa ccaaagggga
     1681 gactttgtca tgcccgacat caagggaagc tgccgctgcg gtaaagttag ctacgcatcc
     1741 tcggccgatc cggtctttgt cggcatctgc cactgccggt cgtgccagaa atcgactggg
     1801 tcggcgtatg gaaccgtggt ggccgtaccc accgccgccc tgaccgtcac cggcaccacg
     1861 aaatccttcg atgacaccag cgacaacggc aatccgacgc atcgcgcgtt ttgtccggaa
     1921 tgcggctcga ccatcaccca gacagccgac gtgatggccg ggttgacgat gatccctgtg
     1981 ggaacgctgg acgaaccgcg ttcggtcaat cccgccatgc agatcttttg cgatagcgcg
     2041 ctgccatgga gcaccatcgc cggcatgcag agcttcccca gaatgcccgg ataatacgac
     2101 atcagggcgg taacaaggtc cgccagcccg caacaaacgc atatttgcca ttcgccgtga
     2161 aggtgcggaa tcggccgcta ccggcgggtt tttacgttga aatgtctacg gtactgtcct
     2221 atgttgcagt gcaacacgga tggagcgtcc tttccggttt taagcgaagg gaacaccgac
     2281 atgaacaatg gtaatttttg gtctgactat gccgacgcga tggaattgtc cgtcgagggc
     2341 aaccggctga tcgcccagga aatcgtcgaa ctggccggcg gcttgtggaa caaagcgatt
     2401 cgctcactcg acagggcgct tcagaacgtc ggccagcacc cgcacttgcc gccgatctga
     2461 ccgacccggt caaggctgcc gctgcgacgc gaacctgacc agttcagtcc gaacgatctt
     2521 accgttcgcg ttgcgcggca gtcccttgat ctgaagaatg aattttggcg ccttgtcggc
     2581 cagctttgcc cggcagagcg cctgcagtgc ggccatgtcc accggcgtgg ccgagacgat
     2641 cgccgcccag atctgcacca cgcccatccg gtcgggcaca ccgaacgcag ccgcgtccgt
     2701 cacctgcggc agcgataata gcacgttctc gatgacgact gggctcactt tgttgccgcc
     2761 ggcattgatg aaatcaccgt cccggccggt gatggtcagc agcccgtccg gcgataccga
     2821 acctatgtcg ccacaataga accagccgtc cctgaacacc gcggccgagg cctccgtgtc
     2881 cccgacatat ccgccg
//
LOCUS       DATAVD010001797         4785 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3709447, whole genome shotgun sequence.
ACCESSION   DATAVD010001797 DATAVD010000000
VERSION     DATAVD010001797.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4785
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3709447"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..420)
                     /locus_tag="VHX39_34340"
                     /pseudo
     CDS             complement(96..420)
                     /locus_tag="VHX39_34340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611116.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            590..1933
                     /locus_tag="VHX39_34345"
     CDS             590..1933
                     /locus_tag="VHX39_34345"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX3996278.1"
                     /translation="MSQTPQRRPYVQRTAAFASGTDSPMQVLEECLAEIDQRESAVGA
                     FTVIDAAAARAAASAAGERWRANKPLSAIDGMPVGVKDMIDTADMVTGMGSPLYDGYR
                     PRFDSASVQGLRESGAVIVGKTVTTEFASAQPRGTRNPWDLTRTPGGSSSGSAAAVGS
                     GMLCGGLGTQVVGSILRPSGYCGAYGFKPSVGGINRGGSLDFLSQSVTGTIAASLADV
                     WAMARAVAERIGGDPGYPGLTGPLTLPPSRQATRLALLRTAGWPILAEQARASLDGAL
                     DRLRKAGVTVVTPDDSPALAAVETATAEALQITAGINAWEWRWPLGSFAARDASLLSP
                     SALERHAKSNAMTQADYASLLARRSEARAAYAAVAGQVDAVISVTAPGAAPVGLETTG
                     NPIFVVPASMLGAPGVSLPVLDDAGLPLGLQILGVPQGDAVLFAVAGWIENLLRG"
     gene            2154..3203
                     /locus_tag="VHX39_34350"
     CDS             2154..3203
                     /locus_tag="VHX39_34350"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3996279.1"
                     /translation="MKVRFGVSMLSGTAFPHRRDLEKIAELVRIIDGSGVELIGTNDT
                     SFIGGDAYVRTTLIAQTAKNAQVGIHPTNPLTREPQIMAAFLASIDAMTEGRAFMDIG
                     SGDSAVYNIGLEPASRAKMEDYITCVRDLIATGEGSYAARPQRVRWHGEAVRKRIPIT
                     LCAEGPKTLHLGGRICDGVIAGTGLLPEVISDTIERVAAGAKAAGRDPSEAEVWFTTR
                     SSLDADSEKAVERIHASVSSILNHSMRFGLEGKNVPGQLRAKVAEYVAGYELYDHVLQ
                     AGRNPKRMAELGLTTYGLERFALAGNAKDWIERIGELAELGATRLWLSTESGDLDRQI
                     HYMKVFTQEIMPHFR"
     gene            complement(3229..3582)
                     /locus_tag="VHX39_34355"
     CDS             complement(3229..3582)
                     /locus_tag="VHX39_34355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014198214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 domain-containing protein"
                     /protein_id="HEX3996280.1"
                     /translation="MSYVMGFVLPVPTANKDQYREMAAKASPIFKEYGALQHVEAWGD
                     DIPDGKVTDFKMAVKARPDETVVFSWLVWPDKATYEAAQKKIMTDERMKGLEMPFDAR
                     RMIIGGFSTLLETKA"
     gene            complement(3714..4463)
                     /locus_tag="VHX39_34360"
     CDS             complement(3714..4463)
                     /locus_tag="VHX39_34360"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3996281.1"
                     /translation="MPFHEKGDVRIHYQEAGSGFPMLIIPGGGLNSTPAFFTKSSPFN
                     PMEEFKGEYRCITMDLRNAPDGQSTGPLESDRPWDAYTDDQLGLMDHLGCKEFLVMGF
                     CIGGPMIWNLLKRAPGRIPAAVLAQPSGFRPEMPRLSFTNNMAGWGPEICARRPNITM
                     AMVEPFLARMYGDADFVYTVSRDFVRSCQTPVLILPDDVPAHPYAVAMESARLAPNSQ
                     VSLYPWKDPKDLIPLAVRHTRAFLKGNTPAR"
BASE COUNT          931 a         1492 c         1460 g          902 t
ORIGIN      
        1 gtggtgcggg ttaagcttaa acgctgacgg gttggatttc caggcgtcac aaatgctttg
       61 gaatggcgtt cgccatcgga gtgattccgg tcccataaat caacgcggcg ccagcgcacc
      121 acgccgtctt tttaccagat cgggaccgtt ttcaaccaag gtgaccacct cggcctcctg
      181 ttccgcggtc agaaatggcc gaggatccgg ttgggcgagg tcatacaggc ccggcaagcc
      241 gtattcattg tatcgaagca cccaatcgcg aagcgtctga cggtccatgg cgcaggcttc
      301 agcggcggcc tcgcgggaat gaccgtccag caccatcgcg atcgcgttct tcgatcgcgc
      361 ggcttccgcg cgtaaatccg cagacgtcag atccgtccga gtgatcgata atgcaaccat
      421 cccgcactcc atgagcagac tgtcaaaggt gtcaattgag tttacgacat agtaagatca
      481 gaccgcggtc tcgacgcaaa ggctctacca aatacccccg caaactccgc aacccgtgga
      541 caccaggcca ccggcctgct gaattgcttt ctttaccgcg agcaaaagca tgagccagac
      601 accgcagcgc cgcccttatg tccaacgtac cgctgctttc gccagcggca ccgactctcc
      661 gatgcaggtt ctggaggaat gcctggccga gatcgaccag cgcgagtcgg cagttggcgc
      721 cttcacagtg atcgatgccg ccgccgctcg cgccgcagcc tcggccgccg gggaacgctg
      781 gcgagcaaac aaaccgctgt cggcgatcga tggtatgccg gtcggcgtga aggacatgat
      841 cgacaccgcc gacatggtca ccggcatggg gtcgccgctg tacgacggct accgtccccg
      901 cttcgactct gccagcgtgc aaggcctgcg cgagtccggc gccgtcatcg tgggcaagac
      961 cgtcacaacg gagttcgctt ccgcgcagcc gcgagggacc cgcaacccgt gggacctgac
     1021 gcgcactccc ggcggcagca gcagtggatc ggctgcggca gtcggcagcg gaatgttgtg
     1081 cggcggcctc ggcacgcagg tcgtcggctc catcctgcgg ccgtcgggct attgcggagc
     1141 gtatggcttc aagccctcgg ttggcgggat caatcgcggc ggcagtctcg actttctcag
     1201 tcagagcgtc accggaacga tcgccgcgag cctcgccgac gtgtgggcca tggcgcgagc
     1261 ggtcgcggaa cggatcggcg gtgatcccgg ctatcccgga ttaaccggcc cgctgacctt
     1321 gccaccatcc cggcaggcga cacggttggc actgctgcgc accgccggat ggccgatcct
     1381 ggccgaacag gcgcgtgcct cgctcgatgg tgcgctggac cggctgcgta aggccggtgt
     1441 gaccgtggtg acgccggacg attcgcccgc actcgccgca gtcgaaaccg caaccgcaga
     1501 agcgctgcaa atcaccgcag gcatcaatgc ctgggagtgg cgctggcctt tgggcagctt
     1561 cgcggcgcgc gacgcctcgc tgttgagccc gagcgcgctg gagaggcatg cgaagtcgaa
     1621 tgcgatgaca caggcggact atgcttcact gctcgcccgc cgatccgaag cgcgagcggc
     1681 ctacgccgcg gtggccggcc aggtcgatgc ggtgatcagc gtgactgcac cgggcgcagc
     1741 gccggtcggt ctggaaacga caggcaaccc gatcttcgtc gtaccggcct ccatgttagg
     1801 agcaccgggc gtcagcctgc ccgtactcga cgacgccggc ctgccattgg gtttgcaaat
     1861 attgggcgtt ccgcagggcg atgcggtttt gtttgcagtg gcaggctgga tcgaaaacct
     1921 gctgcgcggg taggtttggg tgtcgccgtt agtcataatg cgccaagaat ggaaacttat
     1981 acgaggatgc tctacccccg tccgttcata tatctgacgt tcgacagcca ggcgccacgt
     2041 ttatcctacg aaagtgagaa tgtgcaaccg accgacacct gcctggcgtt gtcgccatcc
     2101 ggaagcgaga ctacggtcgc cgctgagacg gctgccggcc gaaaggagag ccaatgaaag
     2161 tacgattcgg cgtatcgatg ttgagcggca ctgcattccc tcatcgccgg gacctggaaa
     2221 aaattgccga gctcgtcagg atcatcgacg gatcgggagt cgagctgatc ggcaccaacg
     2281 acaccagttt catcggcggc gacgcctatg tccgcacgac tctcatcgcg cagactgcaa
     2341 agaacgccca ggttggaatt catccgacaa atccgctgac acgcgagccg cagatcatgg
     2401 cagccttcct cgcctcgatc gacgcgatga ccgaaggtcg cgcctttatg gacatcggca
     2461 gcggcgacag cgccgtctac aatatcggtc tggagccggc gagccgggct aaaatggaag
     2521 actatatcac atgtgtccgc gatctgatcg ccaccggtga agggtcatac gccgctcgtc
     2581 cgcaacgtgt ccgctggcat ggcgaggctg tgcgcaaacg tatcccgatc accctgtgcg
     2641 ccgagggacc caaaaccttg catctcggcg gccgaatctg tgatggcgtg attgccggca
     2701 ccggcctgct acctgaggtg atctcggaca ccatcgagcg agttgccgcc ggcgccaaag
     2761 cagccggtcg cgacccatcc gaggcagaag tctggttcac cacgcgttca tcgctcgatg
     2821 ccgacagcga aaaggcagtt gagcggatcc atgcctcggt gtcctcgatc ctcaatcatt
     2881 ccatgcggtt cggcctcgag ggcaagaatg tgcccggcca gctccgggcc aaggttgccg
     2941 agtatgttgc gggctacgaa ctatatgacc acgtgctgca ggccggtcgt aacccgaagc
     3001 gaatggccga acttggactg accacctatg ggctggagcg ttttgccctc gccggtaatg
     3061 ccaaggattg gatcgagcgc attggcgaac ttgctgaatt gggagcgacg cggctctggt
     3121 tgagcacaga gtccggcgac ctcgaccgcc agatccatta catgaaagtg ttcacccagg
     3181 agatcatgcc gcatttcagg tagcccgctc cggtgacgcc ggtctggttc aggctttcgt
     3241 ttcgagcaac gtcgaaaacc caccgataat catccgcctt gcgtcgaacg gcatctcgag
     3301 gcctttcatc cgctcgtcgg tcatgatttt tttctgcgct gcctcgtagg tcgccttgtc
     3361 cggccaaacc agccacgaaa acacgacagt ttcatcaggc cgcgccttta ccgccatttt
     3421 gaagtcggtg actttgccgt cagggatgtc atcgccccac gcctcaacgt gttgcaatgc
     3481 accgtattcc ttgaagatcg gcgaagcctt ggcggccatt tcgcgatatt ggtccttgtt
     3541 agcggtcggc accggcagca caaagcccat tacgtagctc atacgcttcc tccatcagct
     3601 tgctgtgaac gtcagacccg cgcgggccgc ttcatcaatg cgcgatgacg gaccagggtt
     3661 gcatggcgcg gcagcgcgag gcccggatcg accgggccgc gacgcaacag caatcaccgg
     3721 gcaggcgtgt tccccttcag gaaggcacgc gtgtgacgta ccgccagcgg aataagatcc
     3781 ttcggatctt tccagggata caggctcacc tgtgagttcg gagccagacg cgccgactcc
     3841 attgcaacgg cgtaaggatg cgccgggacg tcgtccggca ggattaaaac cggcgtctgg
     3901 caactgcgca cgaaatcacg gctaactgtg taaacgaaat cggcgtcgcc gtacatcctt
     3961 gccaggaacg gctccaccat cgccatcgtg atgttcggcc tgcgggcgca tatctccgga
     4021 ccccatccag ccatattgtt tgtaaacgac agcctcggca tttccggccg gaatccactg
     4081 ggctgtgcca gcacggccgc ggggatccgt ccaggagcgc gcttgagcag attccagatc
     4141 ataggaccgc cgatgcagaa gcccatcacc aggaactcct tgcagcccaa atgatccatc
     4201 aggccgagct ggtcgtcggt ataggcatcc cacggtctgt cgctctccag cggtccggtg
     4261 gactgaccgt cgggcgcgtt gcgtagatcc atcgttatgc aacggtactc gcctttgaat
     4321 tcctccattg gattgaaggg agagcttttc gtgaagaacg cgggagtcga gttcaggcct
     4381 ccgccgggaa tgatcagcat cggaaagccg gagccggcct cctggtaatg aatgcggaca
     4441 tcgccttttt catggaacgg catggtgatt gtctcctttt cgtgggtgat ggcgacagct
     4501 tcgtgtgtcg gccagcctgt cgcgccagcc agtgggacgc agatctgccg gctgatcgca
     4561 cggtgtcacc cgaccagccg gggcaatcct gatggggttt tgatcggagc gcaaaccgca
     4621 ctacgacgtc caaccatgac cggagacaat cccgccacca ttgaggaccg cgcgacatgg
     4681 cggcgggaac tcgtcgccat ggcgtcgttg agttggccgc tcgcgcttac gaacctgtcg
     4741 caggtcgcca tggcgacgac cgatgtgatg atgatgggat ggctg
//
LOCUS       DATAVD010001798         6601 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1659256, whole genome shotgun sequence.
ACCESSION   DATAVD010001798 DATAVD010000000
VERSION     DATAVD010001798.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6601
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1659256"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..92
                     /locus_tag="VHX39_34365"
     CDS             <1..92
                     /locus_tag="VHX39_34365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEX3996282.1"
                     /translation="GLDGNICRCTGYHNIVKAVKAGAQAMGGH"
     gene            95..2482
                     /locus_tag="VHX39_34370"
     CDS             95..2482
                     /locus_tag="VHX39_34370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013639177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3996283.1"
                     /translation="MNDVSPTSTGIGASVKRKEDFRFLTGRGTYTDDINRPGQTYAYI
                     LRSPHAAADIVKIDTSKAQNAPGVVAILTGADYDKGGLPAGWQIHSKDGSPMAEPPHP
                     VIATGKVRHVGDPVAVVIAETRQQAKDAAELLTIDYADLPGVATMADALAPGAASVHE
                     DVPSNICYDWHIGDKAVVDGVFASAHKVVRLELTNNRLIPNAMEPRAAIGDYDVNSGE
                     YTLYTTSQNPHVIRLLMGAFVLHIPENKLRVVAPDVGGGFGSKIYHYAEEAIVTWASA
                     KVRRPVKWTAERTESFMSDAHGRDHVSTAEMAIDAQGTFLGLRVSTQANMGAYLSTFA
                     PCVPTYLYATLLAGTYKTPVIYCEVKAVFTNTVPVDAYRGAGRPEATFLLERLVDAVA
                     HDTGIDRVELRRRNFIPADAFPYQTPVALQYDSGDYQTTLAVALKNADWAGFEARRTA
                     AKTRGKLRGIGVSTYLEACGIAPSAVVGSLGARAGLYEVANIRVHPTGSVTVFTGSHS
                     HGQGHETTFAQLVVDQLGVPLDQVEVVHGDTGKIPFGMGTYGSRSLAVGGTAMVKAMD
                     KIIAKGKKIAAHLMEASVEDIEFANNTFTVAGTDKSKTLTDISLAAYVPHNYPIDELE
                     PGLDETAFYDPKNFTFPGGCHVAEVEIDPDTGVVRVVDFTAVDDVGRVINPMIVEGQV
                     QGGIAQGVGQALLEAAVYDASGQLMSGSMMDYTMPRADNLPNIQVATENTMCTHNPLG
                     SKGCGEVGAIGSPPAVINAIVDALKDYGVRHMNMPATSGKIWSIINAGSAKLAAD"
     gene            2495..3289
                     /locus_tag="VHX39_34375"
     CDS             2495..3289
                     /locus_tag="VHX39_34375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEX3996284.1"
                     /translation="MYDFAYQKPGSLADAVKALGADEDAKALAGGMTYIPVLKQRLAK
                     PTTVVDLSGLGLTGINVAGGVVTIGAMTTHVTVANNAAVKSAIPALAALAGGIGDEAV
                     RHRGTIGGSIANNDPAADYPAAALALGATIKTDRRSIKADDFFTGMFSTALEQGELIT
                     AVEFPVPAKAAYEKFRNPASRYAIVGVFVAQTPAGVRVAITGAGQGGVFRHTAMEQAL
                     TGNFSAAAVKGIKTSPDDLNGDIHASSEYRAHLVGVITGRAVAKAG"
     gene            3286..4164
                     /locus_tag="VHX39_34380"
     CDS             3286..4164
                     /locus_tag="VHX39_34380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3996285.1"
                     /translation="MTDAPSLPELVARPGANSVAWHDPAFPDQTLFLHAARPAHYTPQ
                     TPLLFVHHGVGRNGAAYRDYWLPLVEQHDLLVIAIEFPEDSFPDYLNYHFGNLHNEDG
                     TPNPREQWTYGIVPRLFDLLRAAGVTGRERYGVFGHSAGGQFVHRMLSFGFRDRVAIA
                     VSANAGTYAMPDLDVPWPFGLGQTEVTPETLVPLLNFPLTVMAGTNDTKTTGRFFPKG
                     PRSMRQGETRYHRAHNYVRLGHAAADSLGTPCTWTVIDVPGVGHDGHGMSIAAAPVIA
                     AALHASEPFPLPADRG"
     gene            4198..5778
                     /locus_tag="VHX39_34385"
     CDS             4198..5778
                     /locus_tag="VHX39_34385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3996286.1"
                     /translation="MKRRDVLKSTAAISAALAAPRIARADGPKTVTFVPHADLASIDP
                     VWTTADITRNYSLAVFDTLFAYDAQFNVQPQMVDGVKTENDGKSWELTLRDGLKFHDG
                     EPVLAKDCVATIKRFSQRYPFGQALMKRVDEISAPSDNVIRFRLNRPFPLLPNALAEV
                     YCAIMPTRLAETDPLKQIPQAIGSGPFKFAADERIPGQRVVFVKNEAYVPRTSGVASF
                     NAGPKIVHVDRVVWTVIPDPATSEAALSQGEIDWWENPTIDLIPQIKRNSSINVVVKD
                     RTGEMACLRFNQLMPPFDNAAIRRVVLSAMDQKEIMDAVAGAEPSLIKTDLGIFVPGT
                     PMASTTGVEATRGPKDFDKIKANLTAAGYKGEKIVVLAATSIPTIWAEAQVATDVLSK
                     IGFNVDMQAMDWPTVVARRASREPIDKGGWNVFYTYLGGFGNVSPAPNIAIRGNGEKA
                     WFGWPTNPKMEEYIDAWYDAPNLAAQKKICDDMQVLFWQDPPYVPMGMYDQPTAFNKR
                     ITDVPEGWPQFYGLKKNS"
     gene            5775..>6601
                     /locus_tag="VHX39_34390"
     CDS             5775..>6601
                     /locus_tag="VHX39_34390"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX3996287.1"
                     /translation="MSRHVAVIGAGIIGAACAIELLRDGHQVTIIEPGEPGGEQAASY
                     GNGTLLNPSSVIPMSSPGIWKKVPGYLRDPLGPLAIRWRYLPRLLPWLRRFVTAGSTP
                     EKVATIAHALQPLLADAPERHHALAEEAGVGELITRQGVLFAYPDRAAFEAEAMSWRI
                     RHDNGTRWLELDADQLRQSEPTLSRNYKFAVLVQENGQCRDPGAYVAALIRLATASGA
                     TLLRTRATGFHIALHRLRAVLTEAGEVEADNAVIAAGAYSKQLAAVAGDRVPLETERG
                     "
BASE COUNT         1327 a         2038 c         2027 g         1209 t
ORIGIN      
        1 aagggctcga tggcaacatc tgccgctgca ccggctatca caacatcgtc aaagccgtga
       61 aagccggcgc gcaagccatg ggagggcact gatcatgaac gacgtgagcc cgacctccac
      121 cggcatcggc gcatcggtca agcgtaagga agacttccgc tttctgaccg ggcgcggcac
      181 ctacaccgac gacatcaatc gtccgggtca gacctacgcc tatatcctgc gctcgcccca
      241 tgcggctgcg gatatcgtca agatcgacac ttcgaaagcg cagaacgcac ccggcgtcgt
      301 ggcgatcctg accggcgccg attacgacaa aggcggcctg cccgccggct ggcagatcca
      361 cagcaaggac ggctcgccga tggccgagcc gccgcatccg gtgatagcaa cgggcaaggt
      421 tcgtcacgtt ggcgatccgg tcgcggtggt gattgccgag acaaggcaac aggcgaagga
      481 cgccgctgag cttttgacca ttgactatgc tgatctgccg ggtgttgcga ccatggcgga
      541 cgccctcgcg cccggcgctg catcagtgca cgaggacgtc cccagcaata tttgttacga
      601 ctggcacatc ggcgacaaag cggtcgtcga cggagtcttt gcgagtgcgc acaaggtcgt
      661 gcgcctggaa ctgacgaaca accggttgat cccgaacgcc atggagccgc gggcggcgat
      721 cggcgactac gatgtcaact ccggcgaata cacgctgtac accaccagcc agaatccgca
      781 tgtgatccgg ttgttgatgg gtgccttcgt gctgcacatc ccggaaaaca agctacgcgt
      841 cgttgcacct gacgtgggtg gcggtttcgg ctccaaaatt tatcattacg ctgaagaagc
      901 catcgttacc tgggcttccg ccaaagtccg ccggccggtc aagtggaccg cagaacgcac
      961 tgaaagcttc atgtccgacg cgcacggccg tgatcacgtc agcacagccg agatggcgat
     1021 cgacgcgcaa ggcacgtttc tcgggctgcg cgtgtcgacc caggccaaca tgggcgcgta
     1081 tctatcgact ttcgcaccct gcgtgccgac atatctctat gccacattac tggccggcac
     1141 gtacaaaacc ccggtgatct actgcgaggt caaggccgtg ttcaccaaca cggtgccggt
     1201 cgacgcctat cgcggcgcgg gacggccgga ggcaacgttc ctgttggaac gccttgtcga
     1261 tgcggtcgct catgacaccg gcatcgaccg cgttgaattg cggcggcgca acttcatccc
     1321 ggccgatgcg ttcccgtatc agacgccggt cgcgttgcaa tatgacagcg gcgactacca
     1381 gactaccctc gccgttgccc tgaaaaacgc cgactgggct gggttcgagg cccgtcgtac
     1441 cgctgccaaa acgcgcggca agttgcgtgg cattggcgtg tcgacgtatc ttgaggcctg
     1501 cggcattgca ccgtccgccg tcgtcggttc acttggtgcc cgcgcaggct tgtatgaggt
     1561 tgccaacata cgcgtacacc cgaccggcag cgtaacggtg ttcaccggat cgcacagcca
     1621 cggtcaggga cacgaaacca cgttcgcgca gttggtggtc gatcagctcg gcgtaccgct
     1681 cgatcaggtt gaggtcgtgc acggcgatac cggaaaaatc ccgttcggca tgggcaccta
     1741 tggcagtcgc agcctcgcgg tcggcggcac ggcgatggtc aaggcgatgg acaagattat
     1801 cgccaagggc aagaagattg ccgcccacct gatggaagcc tcggtcgagg acatcgagtt
     1861 cgccaacaat acgtttaccg tcgcaggcac cgataagtcg aagacactga cggacatctc
     1921 gttggcggct tatgtcccgc acaactatcc gatcgacgaa ctggaacccg gcctggatga
     1981 aaccgcgttc tacgacccga agaacttcac cttcccgggt ggctgtcacg tcgccgaggt
     2041 cgaaatcgat cccgacaccg gtgttgtccg agtggtcgat ttcactgccg tcgacgacgt
     2101 cggccgcgta atcaacccga tgatcgtcga gggtcaggtg cagggcggga tcgcccaggg
     2161 tgtggggcag gcgttattgg aggcggcggt gtacgatgcg tcgggtcaac tgatgtcagg
     2221 ctcgatgatg gactacacca tgccgcgcgc cgacaacctt cccaatatcc aggtggcgac
     2281 cgaaaacacc atgtgtaccc acaatccact tggctcgaag ggttgtggcg aggttggcgc
     2341 gatcggctcg ccgcccgccg tgatcaatgc gatcgtcgac gcattgaagg attacggcgt
     2401 gcgtcatatg aacatgcctg ccacgagcgg gaaaatctgg tcgatcatca atgccggttc
     2461 ggcgaaactg gcggcggact gaaaggggcg aaccatgtat gatttcgcgt atcagaaacc
     2521 cggtagcctc gccgatgcgg tcaaggcttt aggcgccgat gaagacgcca aggcgttggc
     2581 tggcggcatg acctacattc ctgtgctgaa acaacgcctc gccaaaccca cgaccgttgt
     2641 cgatctctcc ggactgggcc taaccggcat caatgttgcc ggcggcgtag tgacgatcgg
     2701 cgcgatgacc acgcacgtga cagtggccaa caacgctgcg gtcaaaagtg cgatcccggc
     2761 gctggccgca ctggcgggtg gcattggcga cgaggcggta cggcatcgcg gcacgatcgg
     2821 cggcagcatc gccaataacg atccggcagc ggattatccg gcggccgcgc tcgctttggg
     2881 tgcgaccatc aagaccgatc ggcggtcgat caaggcagat gatttcttca ccggcatgtt
     2941 ctccacggcg ctggagcaag gcgaactcat cactgcggtc gaattcccgg tgccggcgaa
     3001 ggcggcgtat gagaagttcc gcaaccctgc ctcccgctat gccattgtcg gcgtgttcgt
     3061 ggcgcaaact ccggccggcg tgcgcgtcgc gatcaccggt gcaggccagg gcggcgtgtt
     3121 ccgccacacg gcaatggagc aggcgttgac tggaaatttc tcggctgctg cggtcaaggg
     3181 gatcaagacc tcgcccgacg atctgaatgg cgatatccac gccagttcgg aatatcgggc
     3241 ccatttggtc ggggtgatca ccggtcgcgc ggtggccaag gcaggatgac cgacgcgccg
     3301 agtttgccgg aattggtcgc ccgtcccggc gccaattccg tggcctggca cgacccggca
     3361 tttcctgatc agacgctgtt cctgcacgcc gcccggccgg cgcattacac accgcaaacg
     3421 ccattgttgt tcgtgcatca cggcgttgga cgcaatggcg cggcctatcg cgattactgg
     3481 ctgcctttgg tcgagcaaca cgacctgctc gtcatcgcca tcgaatttcc ggaagattcg
     3541 tttccggatt acctgaacta tcattttggc aatctgcata acgaggacgg cacgccgaac
     3601 ccacgcgagc aatggaccta cggcatagtt ccgcgcctgt tcgacttgct gcgagcggcc
     3661 ggcgtgacag gtcgggaacg ctacggtgtc ttcggacact ccgccggcgg acagttcgtc
     3721 catcgcatgc tgtcattcgg gttccgtgac cgcgtggcga ttgccgtcag cgccaatgcg
     3781 ggcacctacg cgatgcctga cctggatgtt ccctggccat tcggactggg ccagaccgag
     3841 gtcaccccgg aaacgctggt accgctgctg aatttcccgc tgaccgtgat ggccggtacg
     3901 aacgatacca aaaccaccgg ccgatttttt cctaaaggac cacggtcgat gcgccagggt
     3961 gagaccaggt atcaccgtgc gcacaactat gtccgtctcg gccacgcagc cgcggactct
     4021 ttgggcacgc cttgcacctg gacggtcatc gatgtcccag gtgtcggcca cgacggacac
     4081 ggcatgtcga ttgctgctgc gccggtgatc gcggcggcat tgcatgcatc cgaacccttc
     4141 cccctgccgg cggatcgcgg ctaatctgcc accccagcaa accggggaat gacagatatg
     4201 aagcgccgtg acgtcctgaa atccaccgcg gcaatctcgg ccgcactggc cgcaccgagg
     4261 attgcgcgcg ccgacggacc taaaacggtc accttcgtgc cgcacgcgga cctggcctcg
     4321 atcgatccgg tttggaccac ggctgatatc actcgcaact attcgctggc ggtgttcgat
     4381 acgctgttcg cctacgacgc gcagttcaac gtccagccgc aaatggttga cggcgtgaag
     4441 acggaaaacg acggcaaaag ctgggaactc acgctgcgtg acgggttgaa gtttcacgat
     4501 ggcgaaccgg tgctggcaaa ggactgcgtc gcgaccatca aacgtttctc gcagcgctac
     4561 cctttcggcc aggccttgat gaagcgtgtg gatgagatct cggcgccatc ggacaacgtg
     4621 attcgtttcc ggctcaaccg gccattcccg ctgctgccga atgcgctcgc cgaagtctat
     4681 tgcgcaatca tgccgacgcg gctggcggag acggatccgc tgaaacaaat tccccaggcg
     4741 atcggcagcg gtccgttcaa atttgccgct gacgaacgca ttcccggtca acgcgtcgtg
     4801 ttcgttaaga acgaagcata cgtgccgcgc acgagcggcg tggcgagctt caacgccgga
     4861 ccgaaaatcg tgcatgtcga ccgcgtcgta tggaccgtca ttcccgatcc cgccacgtcc
     4921 gaggccgcat tgagccaggg agaaatcgac tggtgggaga atccgacgat cgacctgatc
     4981 cctcagatca agcgaaattc gtcgatcaat gtcgtggtga aagaccgcac cggcgaaatg
     5041 gcctgtctgc gctttaacca actgatgccg ccattcgaca acgcggcgat ccggcgtgtg
     5101 gtgctgtcgg caatggacca gaaggaaatc atggacgcgg tggccggcgc cgagccctcc
     5161 ctcatcaaga cggatctcgg gattttcgtt ccgggaacac cgatggcgag cacgaccggc
     5221 gtcgaggcta cgcgcgggcc caaggatttc gacaagatca aggccaacct caccgcggcc
     5281 ggttataaag gcgaaaagat cgtcgtgctt gctgccacat cgatcccgac catctgggct
     5341 gaagctcagg tggcgaccga cgtgttgtcg aagatcggct tcaatgtcga tatgcaggcg
     5401 atggactggc cgacggttgt cgcccgccgc gccagcaggg aaccgatcga caagggcggc
     5461 tggaacgtat tttacaccta tctcggcggc ttcggtaacg tttcgccggc gccgaatatc
     5521 gccatccgcg gcaatggcga gaaagcctgg tttggctggc cgaccaaccc gaaaatggaa
     5581 gagtacatcg acgcctggta tgacgcgcca aacctcgctg cgcagaagaa gatctgcgac
     5641 gacatgcagg tgttgttctg gcaggacccg ccttatgtcc cgatgggcat gtacgaccag
     5701 ccgaccgcct tcaacaagcg gatcaccgac gtgccggaag gctggccgca attctacgga
     5761 ctgaagaaga attcgtgagc cgccacgttg ccgttatcgg cgccggcatc atcggtgccg
     5821 cctgtgccat cgagctgttg cgcgacggac atcaggtcac gatcatcgaa ccgggagagc
     5881 ccggcggcga acaagccgcc agctacggca acggcacatt gttgaacccg agttcggtca
     5941 ttccgatgtc gtcccccggc atctggaaga aagttccggg ctatttgcgc gatccgctcg
     6001 gtccgctggc aatcaggtgg cgctatttgc cccggctgct accttggctg cggcgattcg
     6061 tcaccgccgg ttcgacaccg gaaaaagtcg cgacaatcgc gcatgccctg caaccgctgc
     6121 tggccgatgc gccggagcga catcacgctt tggcagagga agccggagtc ggcgagctca
     6181 ttacacggca aggtgtgctg ttcgcttatc ccgaccgtgc ggcattcgag gctgaggcga
     6241 tgtcctggcg cattcgtcat gacaatggca cacgctggct ggaactggat gccgaccaac
     6301 tgcgccaaag tgaaccgact ctcagccgga actacaagtt cgcagtcctg gtacaggaga
     6361 atggccagtg ccgtgatccc ggcgcctatg tggcagcact gatccggctc gcgactgcgt
     6421 caggtgcgac attgctgcgg acacgagcga ccgggttcca catcgcactg caccggcttc
     6481 gcgccgtgct gactgaagcc ggcgaggttg aggccgacaa tgccgtcatc gcagcgggtg
     6541 cgtattcgaa acaactggcc gcagtggccg gggatcgcgt gccgttggaa accgaacgcg
     6601 g
//
LOCUS       DATAVD010001799         2320 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2403979, whole genome shotgun sequence.
ACCESSION   DATAVD010001799 DATAVD010000000
VERSION     DATAVD010001799.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2320
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2403979"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..>2320
                     /locus_tag="VHX39_34395"
     CDS             121..>2320
                     /locus_tag="VHX39_34395"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEX3996288.1"
                     /translation="MNSRYLIVGLAFLGLSLPVWAQVSASISGRVEDPSGAGVSGAAI
                     TVKSLETGATRSTVTDSSGNYELLSLPLGPQELKAGKTGFKAVVRTGINLEVGEQAVA
                     NVRLEVGNIVQQVNVIEDAPLVNTTTESTAGTVGEREVKDLPLNGRSFDNLITLNPGT
                     VSYALKSANTTTSNGNTFSVDGRRPGDNLFLINGIEYTGSSQLAITPGGVSGELLGID
                     AIREFNVLTDSYSAEYGKRSGAQVIAVTQSGTNDLHGTVFEFIRNSALDAKNYFDQGS
                     IPPFRRNQFGGALGGPLKKNRLFMFGNYEGFRQSLALSNVSVVPDAATRTASGAGVNP
                     AMLKFFSLWPAANGPEVFVQPIVNGVASGSPMASGTAFSYNHPNESIREDFGTTRTDY
                     AISDRDSLTSSYTIDDGTSTIPAVDPLFASLSYLRNQVASIQETHILSPSVLNTFRFG
                     YSRAGWNLYPVSLASFDPSLSFVDGQGPGGITIGGGNTTTGPAAITAAGPNNAANVWN
                     RRNLFTLSDDVQLTKGRHQISAGVWFQRIQDNENTASRTTGIAAFASLTTFLAGTATS
                     FQVVPNANELGWRSLFGAWYVQDTIRLRRNVTLSLGLRHEFTTGWNEVSGRAANYVTD
                     ASGVLITQPILGDSAFTQNNATKLFSPRVGLAWDVFGNGKTSVRAGFGTYYSLIDDLS
                     FLLNSLPPANTSISCPGALLALLPVTTTWSYPASCSVAPQGVQPDAKTPTV"
BASE COUNT          480 a          700 c          647 g          493 t
ORIGIN      
        1 gaagtgaact ggatggtcta cgtcttaacc gctatgtttc tgttacgttt ctattggctc
       61 tgacgcaaca tagttcgatg taatacgctg gatgttattt caggatatga gaggtcttgc
      121 atgaatagtc gctatctgat cgtgggtctg gcgtttctgg ggttgtccct gcctgtttgg
      181 gcgcaagtct ccgcgtccat ttccggacgt gttgaagatc catcaggcgc tggcgtcagt
      241 ggcgctgcga tcacggtgaa gagcctcgaa acaggcgcga cccgcagcac ggtgacggat
      301 agctctggca actacgaact cttgtcgctg ccgctgggcc cgcaggaact gaaggccggg
      361 aaaaccggat tcaaagccgt ggttcgcacc gggatcaatc tcgaagtcgg cgaacaggcg
      421 gtcgccaatg tgcgtctcga agtaggcaac atagtgcagc aggtgaatgt tatcgaggac
      481 gccccactcg tcaacaccac cacggaatcc acggcgggca cggttgggga gcgggaagtc
      541 aaagatttgc ctctgaacgg ccgcagtttc gataacctta tcacgctgaa tccgggaacc
      601 gtcagctacg ccctcaagag cgcgaatacg acgacgagca acggcaatac attctcggta
      661 gacggccgcc gtcccggcga caatctcttc ctgatcaatg gcatcgaata caccggatcg
      721 agccagcttg ccatcacgcc cggaggtgta agcggggaat tattgggcat tgatgcaatc
      781 cgcgagttta acgtcctgac cgactcctac tcggctgagt atggaaagag gtccggcgcg
      841 caggtgattg cggtaactca gtccggaacc aacgaccttc atggaaccgt atttgagttc
      901 atccgcaaca gcgcgcttga tgccaagaat tacttcgatc agggttccat tcctcccttt
      961 cgcagaaacc agttcggcgg cgcactcggt ggaccgctga agaaaaaccg ccttttcatg
     1021 ttcggcaact acgaaggctt ccgccagtcg ctcgcgctca gcaatgtatc ggtcgttccc
     1081 gatgccgcca ctcgcaccgc ttcgggcgcc ggcgtgaacc ccgccatgct gaaattcttt
     1141 agcctgtggc cggctgcgaa cggtcccgaa gtatttgtgc aaccgatcgt gaacggagtg
     1201 gcgagcggca gcccgatggc tagtggaacg gcgttttctt acaaccatcc caatgaaagc
     1261 atccgtgagg acttcgggac tactcgaacc gattacgcca tcagcgaccg cgactcattg
     1321 accagttcct acacgatcga tgatggcacc agcaccatac cggcggttga tcccctcttt
     1381 gcctccctgt cttatctgcg caaccaggtg gcaagcattc aggaaacgca tatcctgtcg
     1441 ccgagcgtgc tcaatacatt caggttcggt tactcgcgcg cgggctggaa tctttacccg
     1501 gtgtcgctgg cctcattcga tccgagcctg tcttttgtcg atggccaagg ccctggtgga
     1561 atcaccattg ggggcggcaa caccacaacc ggtccggcgg cgattaccgc ggccggcccg
     1621 aataacgcgg cgaacgtctg gaaccggaga aacctgttta ctttatccga cgacgtgcag
     1681 ttgacgaaag ggcgtcatca gatcagcgcc ggcgtgtggt tccagcgcat tcaggacaac
     1741 gaaaacaccg catcgcgcac caccggaata gccgcgttcg catcgttgac taccttcctt
     1801 gcgggaacgg ccacatcttt tcaggtagtg cccaatgcca atgagctggg ctggagaagt
     1861 cttttcggag cctggtatgt ccaggacacc atccggctgc gccgcaatgt cacgctgagc
     1921 ctcggcctgc ggcacgaatt caccaccggt tggaacgaag tatccggacg cgcggcgaac
     1981 tacgttaccg acgcttccgg cgtcctgatt actcagccga tcctcggcga ttccgcgttt
     2041 acgcagaaca acgcgacgaa gctgttttcg ccccgggtcg gcttggcctg ggacgtgttc
     2101 ggcaacggca aaacctccgt ccgcgccggc tttggcactt actattccct catcgacgac
     2161 ctcagctttc tgctgaattc gctgcctccc gcaaacacgt cgatctcctg tcccggcgcg
     2221 ctgttagcgc tgcttccggt gaccaccacc tggtcgtacc cggcttcctg cagcgttgct
     2281 ccgcagggag tccagcccga cgcaaaaacg cctaccgtcg
//
LOCUS       DATAVD010001800         4956 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1287650, whole genome shotgun sequence.
ACCESSION   DATAVD010001800 DATAVD010000000
VERSION     DATAVD010001800.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4956
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1287650"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..476
                     /locus_tag="VHX39_34400"
     CDS             <1..476
                     /locus_tag="VHX39_34400"
                     /inference="COORDINATES: protein motif:HMM:NF028004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome P460 family protein"
                     /protein_id="HEX3996289.1"
                     /translation="GDASSAQDRYSLKVPDGLAFSDFKGYEDWRDVAVSQVKDGIKLI
                     AANPVMLKAFRSGLPADGKSFPDGSKIVKIEWTQKQSTVSPYFVMVPDALRSVSFIEK
                     DTKRFPNTHGWAYAQFAYDPTSKTFKPSVTGAECGYECHSKVAAEDYIFTAYPPR"
     gene            757..1566
                     /locus_tag="VHX39_34405"
     CDS             757..1566
                     /locus_tag="VHX39_34405"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HEX3996290.1"
                     /translation="MLLVIDAGNTNIVFAVRDDTGWIGSWRIRTDPQRTSDEYAVWLL
                     ALLGHVGIRKEDVSRAVLGTVVPAALYHLRRLCREWFAVEPLVARASLDWGFEIKVDN
                     PNEVGADRLLNTLAGGRHFGGPLIVVDFGTATTFDVVDKDGAYLGGVIAPGINMSLEA
                     LHQAAARLPRIGIGRPQAVIGTSTVPAMQSGLYWGYVGLIEGLIARIKAEYGGPMKVI
                     ATGGLAPLFSEGTMQIEQIEPDLTLDGLYLLAERNAAPVMPRERTRLIESE"
     gene            2148..2972
                     /locus_tag="VHX39_34410"
     CDS             2148..2972
                     /locus_tag="VHX39_34410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008532075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3996291.1"
                     /translation="MSTITTKDGVEIFYKDWGQGQPIVFSHGWPLSADDWDAQMLFFV
                     TRGFRVIAHDRRGHGRSTQTSGGHDMDHYADDLAALTAHLDLKHAIHVGHSTGGGEVT
                     HYLARHGESRVAKAAIISAVPPLMLKTAANPGGLPKEVFDGFQAQLAANRSQFYRDVP
                     EGPFYGFNRPGAKASEAIIQNWWRQGMMGGAKAHYDGIIAFSQTDFTEDLRKITVPVL
                     VMHSEDDQIVPYAAAGPLSAKLLRNGSLRTYKGFSHGMHTTQADTINADLLDFVKS"
     gene            3223..4869
                     /locus_tag="VHX39_34415"
     CDS             3223..4869
                     /locus_tag="VHX39_34415"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEX3996292.1"
                     /translation="MDLDTEDLSFLPLGGTGEIGMNLNLYRCDGKWLAIDCGIGFGGA
                     AHPEVDVMMPDPAFIAGRRDQLLGLVITHAHEDHLGAVAWLWPQLRCPVYATPFAAAV
                     LKRKLAEAGLLNQVRVHVVQPGGEVNLKPFAIRLIRMSHSIPEAQALAIDTPYGTILH
                     TGDWKLDPTPLLGPPSDETALAELAKKPVLAMICDSTNAMVEGHSGSEKDVSQVLTAL
                     IRGLRGRVAVTCFASNVARMESIARAAAAAGRSTALVGRSLRNIDAAARECGYLKSLP
                     PFLREDDVDDLPDENVLMLITGSQGEPRSALARVALDTHPRIALGEGDTVIFSSRVIP
                     GNERAITTVQDNLVRRGVDVMTDSDHAVHVSGHPARDELRRLYRLVKPRYAVPVHGEW
                     RHLTAHAALAKEEGAHPILLEDGDILNLAPGTVEIVDSAPVGRLVLDENRLIPMQGEV
                     MNARRRLLYNGVAVVSLAVDRAGNIVGEPKLSAPGLLDADDPEVGRVMYEFSETVADL
                     TTATRRDDDLLTEAARAALRRAVGKRLKKRPQVDVHLLRV"
BASE COUNT          933 a         1496 c         1616 g          911 t
ORIGIN      
        1 gtggagatgc cagttcggcg caggaccgat actcgttgaa ggttcccgac gggctcgcgt
       61 tttctgactt caagggctac gaggattggc gagacgtggc ggtaagccag gtcaaggatg
      121 gaattaagct cattgcggcg aacccggtga tgctgaaagc atttcgctcg ggtcttccgg
      181 cggacggcaa gagcttccct gatggttcaa agattgtgaa aattgaatgg acccagaagc
      241 agagcaccgt ttcgccgtac ttcgtgatgg tgcctgacgc gctcaggtcg gtttcattta
      301 tcgagaagga cacaaagagg tttcccaata cccacggatg ggcctacgcg cagtttgcgt
      361 atgatccgac gagcaagacg ttcaaaccat cggtgaccgg tgctgaatgc ggctacgaat
      421 gtcactcgaa agttgcagca gaagactaca tcttcaccgc gtatcctcca cggtgatcca
      481 ggcgcgaaac gtcgggtccg cgccgcgttg gtgggcacgg acaaatgacg agcgggctga
      541 cgcggggcag gcctcctcga tcagtgcggt tccggaccga tccatgaaac aatgatcagc
      601 gtgcgccccc aggtgcagtg gcggtggaga gactgacgcc caggctcacc ggtgaaatcc
      661 ggcaaccccg ctcgccggca gccctcaaat gccggttgac ttatccacaa ccctccgctc
      721 atctcccggc ggcagcagga accggggccc agtccgatgc ttctcgtgat cgacgccggc
      781 aacaccaaca tcgtctttgc ggtgcgtgac gacaccggct ggattggctc ctggcgcatc
      841 cgcaccgatc cgcaacgcac ctccgacgaa tacgcggtct ggctgctggc gctgctcggc
      901 catgtcggca tccgtaagga ggatgtgtcg cgcgccgtgc tcggcactgt ggtgccggcg
      961 gcactgtatc atttgcgccg gctgtgccgg gaatggttcg cggtcgagcc gctggtcgcg
     1021 cgcgcctcgc tggattgggg gttcgagatc aaggtcgaca atccgaacga ggttggcgcc
     1081 gaccgtttgc tgaataccct ggccggcggc cggcattttg gcggcccgct gatcgtggtc
     1141 gatttcggca ctgcgacgac gttcgatgtc gtcgacaagg acggcgccta tctcggcggc
     1201 gtcatagcac caggtatcaa catgtcactg gaggcgctgc atcaggccgc ggcgaggctg
     1261 cccaggattg ggatcggaag gccacaggcg gtgatcggga cctcgacagt gccggcgatg
     1321 caatccggcc tctactgggg ttatgtcggg ctgatcgagg ggctgatcgc ccgcatcaag
     1381 gccgagtatg gcgggccgat gaaggtgatc gccaccggag gcctcgcgcc gctgttctcc
     1441 gagggaacga tgcagatcga gcaaatcgag cccgatctga cgttggacgg actttacttg
     1501 ctggccgaac ggaacgcggc accggtgatg cccagggaac ggacgcggtt gattgagagc
     1561 gagtgaacga cggggcggag accgtcgtgg ccgttcacct tgagttgaaa ccgaacgacg
     1621 cccctcggtc caatagccct gggcagcggc ccatatgtgg atgacggccg gaaattccac
     1681 aaaggacgca aagtgcacaa ggggcacgaa gctttcttga acaacacgtg ctatctttgt
     1741 gtcgttggcg tggttttatt tgctttgtga tagttgcgcg gcgctgtacg gatcgatctg
     1801 acagcagtcc ccaggtgcag caccgaagtt gtcattgcga atttgacgcc gatgcgggct
     1861 tgcaatgaca ttaggcaaac atcgaatcgt ttcacctgat cgggaagcgc tctgacaatt
     1921 gccgtgcaat tgtccaagat gcgagcgcaa ccgacaagac cgacgtgccc ttcggttgat
     1981 agcccggcaa tacgccagcg cgtccggtca ttgggtgaac gcaagaccca gcccggatcg
     2041 tgccggtcaa ttccgctgcg tcgcgccgct cggaccaaat ccggtgcaag gcgacggaat
     2101 gttcgacgga ttgaaacccg ccaaaccaaa tcaacgaaag gcacgacatg agcacgatca
     2161 cgaccaaaga cggtgtggag attttctaca aggactgggg ccagggacaa ccgatcgtgt
     2221 tcagccacgg ctggccgttg tcggcggacg actgggacgc gcaaatgctg ttcttcgtca
     2281 ctcgcggctt tcgcgtcatc gcgcatgacc ggcgcggcca cggccggtcc acccagacga
     2341 gcggcggcca tgatatggac cactacgccg acgacctcgc cgcgctgacg gcgcacctcg
     2401 atctgaagca tgcgatccat gtcggccact ccaccggcgg cggcgaggtg acccactatc
     2461 tggcgaggca tggcgaaagc cgggtggcga aggcggcgat tatcagtgcg gtgccgccgc
     2521 tgatgctgaa aacggcggcc aatccgggcg gtcttccgaa ggaggtgttc gatggctttc
     2581 aggcgcaact tgcagccaat cgttcgcaat tctatcgcga tgtgccggaa gggccgtttt
     2641 atggctttaa ccggcccggc gcgaaggcct cggaggcgat catccagaac tggtggcgac
     2701 agggcatgat gggaggtgca aaggcgcatt acgacggcat catcgccttc tcgcagacgg
     2761 attttactga ggatctcagg aagatcaccg tcccggtcct ggtgatgcac agcgaggacg
     2821 atcagatcgt tccctacgcc gctgccgggc cgttgtcggc aaagctgctc aggaatggct
     2881 cgctgaggac ctacaaaggc ttctcccacg gcatgcacac gacacaggcg gatacgatca
     2941 acgccgacct gttggacttt gtgaagtcgt aacgctccga tcgcggcgcc ggtccgcgcc
     3001 gcggtcactt caccgaggcc gccgccagcc agccgcgcac caacaacctg tgacgtgtgc
     3061 cggcccaccg ggccgccctc agccggcacg atcggtgggt ctgtaccttg catctggacc
     3121 tgaccgccca actttggcag tcatgcgccc gagcatccgc tttcccccga tctgagcccc
     3181 ccctggctga gcccctggca cacgaggtaa caccaaactc caatggacct tgataccgaa
     3241 gacctgtctt tcctgccttt gggcgggacg ggcgagatcg gcatgaatct caacctgtac
     3301 cgctgtgacg gcaaatggct cgccatcgat tgcgggatcg ggtttggcgg cgcggcgcat
     3361 cccgaggtcg acgtgatgat gccggatccg gcgttcattg ccggccggcg cgaccagttg
     3421 cttggcctcg tcatcaccca tgcgcatgaa gatcatttgg gggcggtggc ctggctttgg
     3481 ccgcagttgc gctgcccggt gtatgcgacg ccgttcgccg ctgcggtgct gaaacgtaag
     3541 ctggccgagg ccggactgct caatcaggtg cgggtgcacg tcgtccagcc cggcggcgag
     3601 gtcaacctga agccgtttgc gatccggctg atccggatgt cgcactcgat cccggaagcg
     3661 caggcactgg cgatcgatac gccatacggc accattcttc acaccggcga ctggaagctc
     3721 gatcccacgc cgttgctcgg accaccgtcg gacgagaccg cattagcgga actggccaaa
     3781 aagccggtcc tggcgatgat ctgcgattcc acgaatgcaa tggtcgaggg ccactcgggc
     3841 agcgagaagg acgtcagtca ggtgctgacc gcgctgatcc ggggtctacg cggacgagtg
     3901 gctgtgacct gcttcgccag caacgtggcg cgcatggaat cgatcgcccg cgccgccgcc
     3961 gcggcgggtc gcagcacggc tctggtcggg cgcagtttgc gcaatattga cgcggccgcc
     4021 cgcgaatgcg gttacctgaa gtccctgccg ccgttcttgc gggaggacga cgtcgacgat
     4081 ctgccggacg agaacgttct gatgctgatc accggcagtc agggcgagcc acgcagtgct
     4141 ctggcccggg tcgccctcga cacccacccc cgcatcgcat tgggcgaggg tgacacggtg
     4201 attttttcgt cacgcgtgat cccgggcaac gagcgggcga tcaccacggt gcaggacaac
     4261 ctggtgcggc gtggcgtgga cgtgatgacc gactcggatc acgccgtgca cgtctccggt
     4321 cacccggcgc gcgacgagtt gcggcggttg taccggttgg tgaagccgcg ttacgcggtg
     4381 ccggtgcatg gcgaatggcg gcatctgaca gcccatgcgg ctttggcgaa ggaggagggc
     4441 gcgcacccga tcctgttgga ggacggcgat attctgaacc tcgcgccggg tacggttgag
     4501 atcgtcgata gtgcgccggt gggccgcctg gtgctggacg agaaccggct gatcccgatg
     4561 caaggcgagg tcatgaatgc ccgcagacgc ctgctgtata atggcgtggc cgtggtgagt
     4621 ttggcagtcg accgcgccgg caatatcgtc ggcgaaccaa aactgtccgc ccccgggctg
     4681 ctcgatgccg acgatcctga ggtcggtcgt gtgatgtacg agttcagcga aaccgtcgcg
     4741 gatctgacaa cggccacgcg gcgggatgac gatctgctga ccgaggcggc gcgtgccgca
     4801 ttgcgccgcg ccgtcggcaa gcgcctgaaa aaacggcctc aggtcgatgt gcatttgctg
     4861 cgggtttgac gggcggggct tcgccccgga ccccgaccaa ggggctttgc cccttggatc
     4921 cccaccaagg gcggtggccc ttggacccat tcattt
//
LOCUS       DATAVD010001801         1734 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2404134, whole genome shotgun sequence.
ACCESSION   DATAVD010001801 DATAVD010000000
VERSION     DATAVD010001801.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2404134"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..251)
                     /locus_tag="VHX39_34420"
     CDS             complement(<1..251)
                     /locus_tag="VHX39_34420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996293.1"
                     /translation="MNQNTKTGGLITLAILGGTMLLASPASANLVLDVTYDFSYDSGI
                     TIPQETQVENAFNTVAQQFENAITNPITVNVQVSVGTIDG"
     gene            complement(477..>1734)
                     /locus_tag="VHX39_34425"
     CDS             complement(477..>1734)
                     /locus_tag="VHX39_34425"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004474 - malate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006097 - glyoxylate cycle [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="malate synthase G"
                     /protein_id="HEX3996294.1"
                     /translation="EKGGRRMTRKLNADRQYTKPAGGSLWLSGRSLMLIRNVGHHMYT
                     DAVLDASGAEIPEGFLDAAVTSLIALHDLNSKGPIRNSRAGSVYIVKPKMHGPEEVAL
                     TADLFARVETILGIAPNTLKMGIMDEERRTSANLKACIAAATQRVVFINTGFLDRTGD
                     EIHTSIEAGPMIRKNEMRGTAWIAAYEDQNVDIGLECGLRGKAQIGKGMWAAPDRMAD
                     MLVQKVGHPMAGANTAWVPSPTAATLHALHYHQVDVSARQTELASRPRAPLKDLLTIP
                     LAEGQNWSPDDLRQELDNNCQGILGYVVRWIDQGIGCSKVPDIHDVGLMEDRATLRIS
                     SQHIANWLHHGVVTEAQVTEALHRMAVVVDRQNAGDPLYKPMAPGFDGVAYKAASDLI
                     FDGRTQPNGYTEFILHRRRREAKAGA"
BASE COUNT          288 a          600 c          496 g          350 t
ORIGIN      
        1 ccatcgatcg tcccgaccga gacctgcacg ttgaccgtga tgggattggt gatcgcgttc
       61 tcgaattgct gggcaacggt gttgaacgcg ttttcgacct gggtttcctg cggaatggtg
      121 ataccggaat cgtacgaaaa atcgtacgtg acatccagca ccaggttcgc cgacgccggc
      181 gaggccagca gcatcgtgcc ccccagaatg gccaacgtga tcaaaccgcc cgttttcgtg
      241 ttctggttca tggtctcgtt ggcctgtccg tcaaagcgtg tccgccgccc gcgcgtgcgg
      301 tgaatcccat cccgtaccgt ttgatcggcc ccggccgatt acgcgacatt catcaattaa
      361 cgatacgaca cgatcggttt aggccgcggc tatgcggatt tcaagagcaa atttgtctaa
      421 atttcatcct ttcatcgctt aaatagagcc tgctcccgca cccttggcca gggaactcac
      481 gccccggcct tcgcctcccg ccggcggcgg tgtaggatga attcggtgta gccgttcggc
      541 tgcgtgcgcc catcgaaaat cagatcggac gcggccttgt aggccacacc gtcgaacccc
      601 ggcgccatcg gcttgtacag cggatcgccg gcgttctgcc ggtccaccac caccgccatg
      661 cggtgcagcg cctcggtgac ctgcgcttcc gtcaccaccc cgtggtgcag ccagttcgcg
      721 atatgctgcg acgatatccg cagcgtcgcc cgatcctcca tcagcccgac atcatgaatg
      781 tccggcacct tggagcagcc gatcccctgg tcgatccagc gcaccacata ccccaggata
      841 ccctggcagt tattgtccag ctcctgccgc agatcgtccg gcgaccagtt ctggccctcg
      901 gccaacggga tcgtcagcag atccttcagc ggcgcccgcg gacgcgacgc cagctcggtc
      961 tgccgcgcac tgacatcgac ctggtggtaa tgcagcgcat gcagcgtggc ggcggtgggc
     1021 gagggcaccc aggcggtatt cgcccccgcc atcggatggc cgactttctg caccagcata
     1081 tccgccatcc ggtccggcgc tgcccacatc cccttgccga tctgcgcctt gccccgcaat
     1141 ccgcattcca gcccgatatc gacgttctgg tcctcatacg ccgcgatcca ggcggtgccg
     1201 cgcatctcgt tcttgcggat catcggaccg gcctcgatcg aggtatggat ctcgtccccg
     1261 gtgcgatcca ggaagcctgt attgataaag accacccgct gcgtcgccgc cgcgatacag
     1321 gccttgaggt tcgccgacgt ccgccgctcc tcatccatga tgcccatttt cagcgtgttg
     1381 ggggcgatcc cgaggatcgt ctcgacacgg gcgaacagat cggcggtcag cgcgacctcc
     1441 tccggcccgt gcatcttcgg cttcacgata taaaccgacc ccgctcggct gttcctgatc
     1501 ggccccttgc tgttcaggtc gtgcagcgcg atcagcgacg tgacggcggc atccaggaag
     1561 ccctccggga tctccgcacc cgacgcatcc agcaccgcgt cggtgtacat gtggtgaccg
     1621 acattgcgga tcagcatcag gctgcggccg gacagccaca ggctgccccc ggccggtttg
     1681 gtgtattgcc ggtcggcgtt cagcttgcgg gtcatccgcc ggccgccttt ttcg
//
LOCUS       DATAVD010001802         2350 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_174856, whole genome shotgun sequence.
ACCESSION   DATAVD010001802 DATAVD010000000
VERSION     DATAVD010001802.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2350
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174856"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(215..1357)
                     /locus_tag="VHX39_34430"
     CDS             complement(215..1357)
                     /locus_tag="VHX39_34430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase"
                     /protein_id="HEX3996295.1"
                     /translation="MRRNAVTVVGAAETTKLGVIPDVSQIQLHADAALNAMEDCGLRA
                     KDIDGIATAGETPVQLAHYLGITPTWVDGTSVGGCSFMIHVRHAAAAIEAGLAKTILV
                     THGESGRSRVGVGGRSVAASSLNGQFEQPFGPMGPPSMFTIPVLRYMKTYGVTAEQIA
                     QVSVVQREWAAKNPRATFKTPITTDDVLNSRMIAYPFRLLMCCLVTDGGGALILTSAE
                     RAKDFKTKPVYILGTGESAETPMVSQMEDFTSSRAFRVAGPTAFQQAGINVNDVDHLM
                     IYDAFAHLPIYGLEDLGFLPRGEAAAFIAARNTAPGGKLPLNTNGGGLSYMHSGMYGM
                     YALQESVRQMRGIAAAQVPDAKISVCHGVGGMFAASGTIIFSNQEP"
     gene            complement(1362..1778)
                     /locus_tag="VHX39_34435"
     CDS             complement(1362..1778)
                     /locus_tag="VHX39_34435"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon domain-containing OB-fold protein"
                     /protein_id="HEX3996296.1"
                     /translation="MPEPGRALPAPTPETQGFWDGTNAGELRLQRCDACGKNYFPPRP
                     FCPTCSSRKVSWFKASGRAVLWSYVIHHRPVPGFKPPYAIAVVQLAEGPRMMSNIVEC
                     EQTPEALQLDMELEVVFEKQNDTITLPLFRPVAAKG"
     gene            complement(1943..2227)
                     /locus_tag="VHX39_34440"
     CDS             complement(1943..2227)
                     /locus_tag="VHX39_34440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996297.1"
                     /translation="MERTGFETELTRDGYEIVSITMQPDAVNPQHVHPFDARVMVVDG
                     AMTVDREDTGARTFLVGEWFELQAGCRHSEAAGNAGATYVAGRRLPANRR"
BASE COUNT          474 a          781 c          639 g          456 t
ORIGIN      
        1 actttcggtc acgtttctct cctcatgccg cccggcagtg tgctggcgat gatgacccgg
       61 tcaagtcccc accctaaaag aaagctttgg gtccattgag ccctttgtga agatcgcaac
      121 ctttcagcaa gcgagatgct tcctctcggc gcaaagcact cgcttgcgga aggcacacaa
      181 agagcaccag gcgctcaaag ttctcacacc gggcttacgg ttcctgattt gagaaaatga
      241 tcgttccgga cgcagcaaac atcccgccta cgccgtgaca aaccgaaatc ttcgcatccg
      301 gaacctgcgc cgcagcgatg ccacgcatct gccgcacact ctcctgcagc gcgtacatcc
      361 cgtacatgcc tgagtgcata taggataacc cgccgccatt ggtgttcaac ggcaatttac
      421 cgcccggcgc ggtattacgc gcggcaatga acgcagccgc ctcaccgcgc ggcaagaacc
      481 cgagatcttc caacccgtaa atcggcaaat gcgcgaacgc gtcgtaaatc atcagatgat
      541 ccacgtcgtt cacgttgatc ccggcctgtt gaaacgctgt cggaccggca acgcggaacg
      601 cccgcgacga cgtgaaatcc tccatctggc tgaccatcgg ggtctccgcg ctttcgccgg
      661 tgccaaggat atagaccggc tttgttttga aatcctttgc ccgctcggct gacgtcagga
      721 tcagtgcgcc accaccgtcc gtcacaaggc aacacatcag caggcggaac ggatacgcga
      781 tcatccggct gttcaacaca tcgtccgtcg taatcggcgt cttgaacgtt gccctcgggt
      841 tcttcgccgc ccactctctt tgcaccacgg aaacctgagc gatctgctcg gcggtcacgc
      901 cataagtctt catgtatcgt aacacgggaa ttgtgaacat gctcggcggg cccatcgggc
      961 cgaacggctg ctcgaactga ccgttcaatg acgatgccgc aacagaacgt ccgccgacac
     1021 cgacgcgcga ccggccgctt tcgccgtgcg tgaccaggat ggttttcgca aggccggcct
     1081 caatcgccgc cgccgcatgg cggacgtgga tcatgaatga gcatccgcca accgacgtcc
     1141 catccaccca ggtcggtgta atcccgagat aatgcgccaa ctgcaccggc gtctccccgg
     1201 ccgtggcgat cccatcgata tccttggccc gcaacccgca atcttccatc gcgttcagcg
     1261 cagcatcggc gtgcagctga atctgcgaca catccggaat aacgcccagt ttggtggttt
     1321 cggcggcacc gacaacggtg actgcatttc tgcgcatcgg atcaaccttt cgccgcaacg
     1381 ggacggaaca acggcaacgt tatggtatcg ttttgttttt cgaacaccac ctccagttcc
     1441 atgtccaact gtaacgcttc cggtgtttgt tcgcattcga caatgttgct catcatgcgc
     1501 ggcccttcgg ccaactgcac caccgcgatc gcataaggcg gcttgaaacc gggcaccgga
     1561 cgatgatgga tcacatagct ccacaacacc gcgcgacccg aggccttgaa ccaactgact
     1621 ttccgcgatg agcaggtcgg gcagaacggc cgcggcggga agtaattctt gccgcaggcg
     1681 tcgcagcgtt gcagtcgcaa ctcgccggca ttggtgccgt cccaaaatcc ttgcgtttct
     1741 ggcgtcggcg ccggtaaggc gcgtcctggt tcaggcattg gtcgtttccc ccaaattcaa
     1801 tgcgcaacat catgggccgc gctgtggtcc gataatccgt gccgggtcag gtcccgcaga
     1861 cgtgccgcgg ggacgacggc gtgcttgcac tcaggccgtg cggcgacaca ggcaaagcca
     1921 gcggcaccga ccgacccttt gatcagcggc gatttgccgg cagacggcgg cccgccacgt
     1981 aggtggctcc ggcgttaccg gccgcttccg agtgccggca gccggcctgc aactcgaacc
     2041 attcgccaac caggaaggtg cgagcgccgg tgtcctcgcg gtcgacggtc atggcaccgt
     2101 cgacgaccat cacccgggcg tcgaacggat gcacgtgctg cggattgacc gcatctggct
     2161 gcattgtaat cgagacgatc tcatacccat cccgggtcaa ttccgtctca aaccctgtac
     2221 gttccatggc agtcccctcc gcgcaattct gccaacgcta actgaccagc accgccttgc
     2281 caatgaccgc tcggtcgatc accgcctgca aggcctgctt cgcctggtca agcgggaact
     2341 ggtgcgaaat
//
LOCUS       DATAVD010001803         5896 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3710234, whole genome shotgun sequence.
ACCESSION   DATAVD010001803 DATAVD010000000
VERSION     DATAVD010001803.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5896
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3710234"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VHX39_34445"
     CDS             <1..724
                     /locus_tag="VHX39_34445"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010666282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEX3996298.1"
                     /translation="DTCIRLPTGSLRYPAGTHVDAVPGFADGKLWVQDAAAALPALLL
                     APKPGERIADLCAAPGGKTAQLAAAGALVTAVERDPARLARLAENLARCRLPADLVQA
                     DVLSWSPPELFDAVLLDAPCSATGTIRRHPDVPHLKRPRDIGLLCAAQDKLLAAAGRL
                     LRPGGRLIYAVCSLQPEEGAPRLAASGLRVDPFRKAELPGLPEAITGDGFLRTHPGMW
                     RDWGGMDGFFAARMVRDPGVSG"
     gene            complement(1180..1395)
                     /locus_tag="VHX39_34450"
     CDS             complement(1180..1395)
                     /locus_tag="VHX39_34450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996299.1"
                     /translation="MRLQTHCSRQIAALVTIGVRRETKFIIRTARGFGIATRGRFVPV
                     RPMNSNIAPTLHVTNEALLCSSVPLRL"
     gene            1770..4013
                     /locus_tag="VHX39_34455"
     CDS             1770..4013
                     /locus_tag="VHX39_34455"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3996300.1"
                     /translation="MQPAVVNQSSERKPGDAAAIAARPATRWQQARTQIGVILTVGTC
                     VIALLWLIMIDVILNERRAAIEHARAEANNLSAAFQSELSQTLASVARAVDAVADHMR
                     AAQGAFDMHEWASDIPLLAAATIQAGIVGPDGKVVASTLDAHPAPIDVSDREHFRIHL
                     DGKFHGLFISKPIIGRLSGQASIQVSQRVDAADGRFLGVVVFSLAPDQLTRLNKSIDL
                     GPGGLMAVVGTTDQVIRARFATGSESGDFGAGERVPPLPPTVDENAPVQMMIRESVVD
                     HVTRLFSMRNIPGFPLRVAVGFDLSEVLGPAARHAALIETTGIIATLMLVGLMALLTV
                     EIRRRNDREMELREEQTRLAAEIGLGAEVQGRLRASEARLRDFAEMASDWFWEQDAEL
                     RFVPVRFAGAPLASDVQSLHGKRRWEVNDTSQAPERWTNHQIDLLAHRPFRDFRFARP
                     AQDGKVQHVSINGDPIYDETGTFAGYRGTGSDITDLVEAEAELRRSKEQAEASSTAKS
                     TFLANMSHELRTPLNAIIGFAELIVMPRTGRVDDDHVEWAGDILASGRHLLDLINDVL
                     ELSRIEAGRYDLADDTVDLYAMSRSCLAMIRNLAEKSQVRTVCSIAPGAAVLQADQRA
                     IKQVVLNLLTNAVKFTPAGGLVSVRMERGADGAISLIVTDTGIGIDPEALPRLGKPFV
                     QADASTSRHYGGSGLGLAISSRLVALHGGSLTISSVLGQGTEVRVMFPEARVVAPVSA
                     VDVVAGN"
     gene            complement(4018..5400)
                     /locus_tag="VHX39_34460"
     CDS             complement(4018..5400)
                     /locus_tag="VHX39_34460"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX3996301.1"
                     /translation="MEANKTIAPTNDPTYPPAMRILFLEFDTEHDWAVASLGPAFLAA
                     YLRQHDHDAGFLRVPVDRAIADIAEDIRGNAPDLIGVSITTRQWLRARDVLGQVRRSS
                     NVPVIVGGLHATFSPEDVLRHDGIDYLCLGEGEAALLDLVNALQSGRPTTDIPNIWVK
                     NQPRPKLRNPIEPLDAIPFLARDMLDERWGVRHISTQRGCPFPCTYCAARMYDKLYKT
                     GDTTDYGRRRSLGNVLAELHALRNPGPLNYVIFLDDTFTIHHPWVREFCKVYAAEFAI
                     PFSLNARVETVNEIMLHDLAAAGCKHIIYGVESGSERVRREIMQRSATNQRFRDVFRW
                     TREAGITATANYIIGTPGETRAEMQQTIALHHDLQPADFAFFVFYPYPGTELFQLCQA
                     NGYLPDDYLNLPANHRQSILRLPNVTADDIAEVYQQWTELRISTTLQRGPVGDPAQVR
                     AGIRASAARG"
     gene            5563..>5896
                     /locus_tag="VHX39_34465"
     CDS             5563..>5896
                     /locus_tag="VHX39_34465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996302.1"
                     /translation="MRFSWTGLLLAPLLVPMLLSAALSGTMGGDHAAFGFLILLVPGC
                     IISYGATIFLLLPCMFVLSRCRPMTGVSVCLLGLALGMAVYIPVTFLVWGSSGPDSGP
                     PEESFFTFF"
BASE COUNT         1043 a         1653 c         2025 g         1175 t
ORIGIN      
        1 ggatacctgt atccggctgc cgacgggatc gttgcgctat ccggccggga cgcatgtcga
       61 tgccgtgccg ggcttcgccg acggcaagct ttgggtccag gatgccgccg ctgcattgcc
      121 ggctttgcta ttggcgccga agcctggcga gcggatcgcc gatctatgtg ccgcgcctgg
      181 cggcaagacc gcacaactcg cggcagccgg ggcactggtg accgcggtgg aacgcgatcc
      241 ggctcggctg gcccggctgg cggagaactt ggcgcgctgc cgattgccgg cggatctggt
      301 gcaggcggac gtgctgagct ggtcgccgcc ggagctgttc gatgcggttc tgctggacgc
      361 gccgtgctcg gcgaccggaa cgatccggcg ccacccggat gtgccacacc tgaaacggcc
      421 gcgcgatatc ggattgttgt gcgccgctca ggataagttg ctggcggccg caggccggtt
      481 gctgcgccca gggggacggt tgatttacgc ggtctgctcg ttgcagccgg aggagggagc
      541 gcctcggctg gccgcatccg ggttgcgggt cgatccgttt cgcaaggccg agttgccggg
      601 attgccggag gcgatcaccg gcgatggatt tttgcgcacg catcccggga tgtggcggga
      661 ctggggcggc atggacggat ttttcgcggc acggatggtg cgagatcctg gcgtgtcagg
      721 ttaaggcatc gggtttcccg ggcggccact tgtggcatgc cgggctgcat ccctgatgtg
      781 ggatcgtgga gattcgagcc gccatcgtac caaatccgtg actgccgcaa tcgaggaggc
      841 ctctgcaccg cctgcaccag gactgacgca ttgtgttacg gaatgattac attcttccgc
      901 cgggtcattc ggctttatgg cagggaagcc agtgtctgct cagacctgcg ggggactgtt
      961 gtcgccggtg tttccacatg gtaacaagct aagctgactt gccggcgaat tgccgattgt
     1021 acaggagcgc ctcaggtcga tatagccgga tacaattctt ctctgtacct ccggtcctct
     1081 gtaactctga aataaaacct tgcagcgctg atcagggtgt tgcagctgac aatgttggca
     1141 cattttgacg cctcggtccg cgtgggcgca ggacttattt tagagacgca gaggtacaga
     1201 ggaacagaga agggcttcat tcgtgacatg gagggtgggt gcaatatttg aattcatcgg
     1261 ccggacgggc acgaaccgac ctctggtggc gatgccaaac ccgcgggcgg tgcggatgat
     1321 gaatttcgtc tcgcggcgca cgccgatcgt cacaagggct gcaatttgac ggctgcaatg
     1381 ggtttgcaat cgcatttgcg attacctgaa cggaactgga atgtccgaca cggcggtggt
     1441 ctcgatggtg gcaacaaacc tgcggatcag gccgctgcgc cgtggctatg caaccatgcc
     1501 gaatgcgtgg atcggcgggc gggcagggta gcgcgtgaag gcaagggtag cgcccatttc
     1561 gatcgacctg cacccgcaat gcacgggcct tgtcattctg caccaggcgc agcagtctcc
     1621 tgcattgggg acatggagat tgccacgccg aaacggtcct tgtgctgacc ggcgagccag
     1681 accgtaccgg cgcaaccgga acgaaacttg ctgcacgcag gatggcgcgc tcttcgtccg
     1741 gcaattctta ttgcgaaaga cgctcgtgaa tgcagcctgc ggttgttaac cagagctcag
     1801 agcgcaagcc gggagatgca gccgcgatag cggcgcgtcc cgctacacgg tggcaacagg
     1861 cacgcaccca gatcggcgtc attctcaccg ttggcacctg cgtcatcgcg ttgctctggc
     1921 tgatcatgat cgacgtgatc ctgaacgagc gccgcgccgc catcgaacac gcccgcgccg
     1981 aggccaacaa tctgagtgct gcgttccaga gcgaattgag ccagacactg gcctcggtcg
     2041 cccgcgccgt ggatgcggtc gccgatcata tgcgtgcggc gcagggtgcg ttcgacatgc
     2101 atgaatgggc ttcagacatt ccgctgctcg cggctgcgac gatccaggcc ggcattgtcg
     2161 ggccggatgg caaggtagtc gcaagcacgc tggacgccca tccggcgccg atcgatgtca
     2221 gcgaccggga gcatttccga attcatctcg acggtaaatt tcatggcttg ttcatcagca
     2281 agccaatcat cgggcggctg tcgggtcagg cctcgatcca ggtgtcgcaa cgggtggacg
     2341 cggctgacgg cagattcctc ggcgttgtcg tattctcgtt ggcaccggac cagctgacga
     2401 ggttgaacaa atcgatcgac cttggcccag gcggcttgat ggcggtggtc gggaccaccg
     2461 atcaggtgat ccgcgcgcgc ttcgccaccg gcagcgagag cggcgatttc ggcgccggcg
     2521 agcgggtgcc gccgctgccg cccacggtcg acgaaaacgc acccgtgcag atgatgatcc
     2581 gggaaagcgt ggtcgatcac gtgaccaggc tgttcagcat gcggaacatt cccggcttcc
     2641 cgctgcgtgt cgcggtcggg ttcgacctca gcgaggtact gggcccggcg gcccgccacg
     2701 cagcgttgat cgaaaccacc gggatcattg cgaccctgat gctggttggc ctgatggcgt
     2761 tgctgaccgt cgaaattcgc cgccggaacg atcgggaaat ggagctgcgc gaggagcaga
     2821 cgaggctggc cgccgagatc gggctgggtg ccgaggtgca gggacggctg cgcgccagcg
     2881 aggcaaggct ccgcgatttc gccgaaatgg cctccgattg gttctgggag caggatgcgg
     2941 agttgcgctt tgtgccggtc aggtttgccg gtgcgccgtt ggcctcggac gtgcaatcgt
     3001 tgcacggcaa acggcggtgg gaggtgaacg acaccagcca ggcgcccgag cgatggacca
     3061 accatcagat cgacctgttg gcccaccggc cgtttcgcga cttccgcttt gccaggcctg
     3121 cgcaggacgg caaagtgcaa catgtcagca tcaatggcga tccgatctac gacgaaaccg
     3181 gtacttttgc cggctatcgc ggcaccggga gcgacatcac ggacctggtt gaggccgaag
     3241 cggaactgcg ccggtcgaaa gagcaggccg aggcatcgag cactgccaag tcaacctttc
     3301 tggccaacat gagccatgag ttgcgcacac cgctcaacgc gatcattggc tttgccgaac
     3361 tgatcgtgat gcctcgaacc ggtcgggttg acgatgacca tgtggaatgg gccggcgaca
     3421 ttctggccag cggccggcat ctgctggatc tgatcaacga cgtgctcgaa ctgtcgcgga
     3481 tcgaggcagg acgttacgac ctggccgacg acaccgtcga tctctacgca atgtcgcggt
     3541 cgtgtctggc aatgatcaga aatcttgccg aaaaaagcca ggtgcgcacc gtatgtagca
     3601 tcgcgcctgg tgcggcagtg ttgcaggccg atcagcgtgc gatcaaacag gtggtgttga
     3661 acctgttgac caacgccgtg aaattcacgc ctgccggtgg tttggtgtcg gttcgcatgg
     3721 aacgcggggc ggacggggcg atttcgctga tcgtgacgga taccggaatt ggcatcgatc
     3781 cggaggcatt gccgaggtta ggaaaaccgt tcgtgcaggc ggatgcgtcg accagccggc
     3841 actatggcgg cagcgggctt gggctggcga tcagcagccg tctggtggca ctgcatggcg
     3901 gatcgctgac gatcagcagt gtgttggggc aggggaccga ggttcgggtc atgttccccg
     3961 aggcgcgggt tgtggcgccg gtgagcgccg tggatgtggt ggcgggaaat tgacggttca
     4021 accgcgggcc gcgctcgcac gaattccggc gcggacctgc gccgggtcgc cgaccggtcc
     4081 gcgttgcagt gtcgtgctga tgcgcaactc ggtccattgc tggtagactt cggcaatatc
     4141 gtccgcggtt acgttcggca gccgtaatat cgactggcga tgattggccg gcaggttgag
     4201 gtagtcgtcg ggcaggtaac cgttcgcctg gcagagctgg aacaattcgg tgccgggata
     4261 tgggtaaaat acgaagaatg cgaaatcggc gggttgcagg tcgtgatgca gagcgatggt
     4321 ttgttgcatc tcggcgcgcg tttcacccgg ggtgccgatg atgtagtttg cggtggcggt
     4381 gatgcctgcc tcgcgggtcc agcggaagac atcgcgaaaa cgctgattgg tggcggaacg
     4441 ttgcatgatc tcgcggcgca cgcgttcgct gccgctttcg acgccgtaaa tgatatgctt
     4501 gcagccggcc gcggcaaggt catgcagcat gatctcattc accgtctcga cgcgcgcgtt
     4561 caacgagaac gggatggcga attccgcggc gtagactttg cagaattcac gcacccaggg
     4621 gtggtgaatg gtgaacgtgt cgtcgagaaa gatgacgtag ttgagtggtc ccggattgcg
     4681 taaggcatgc aattcggcca gaacattgcc gaggctgcgg cgacggccat agtcggtggt
     4741 gtcgccggtc ttgtaaagct tgtcgtacat ccgcgcggcg cagtaggtgc acggaaatgg
     4801 acaaccgcgt tgggtggaga tgtggcggac gccccaacgc tcgtccagca tgtcacgcgc
     4861 caggaatggg atggcgtcga gcggttcgat cgggttgcgc aattttggcc gcggctggtt
     4921 cttgacccag atgtttggga tatcggtcgt tgggcggccg gattgcaacg cgttgacgag
     4981 gtcgagcaga gcggcttcgc cttcgcccag gcagaggtaa tcgatgccgt cgtgacgcag
     5041 cacgtcctcc ggcgagaatg tggcgtgcag gccgccgacg atgaccggaa cgttgctgct
     5101 acgcctcacc tggccgagga cgtcgcgagc ccgtaaccat tggcgtgtgg taatggagac
     5161 gccaataagg tcgggggcgt tgccgcggat gtcctcggcg atgtcggcga tggctcggtc
     5221 gacggggacg cgaagaaacc cggcgtcgtg atcgtgctgg cgtaagtacg cagccagaaa
     5281 cgctggaccg agtgaagcga cagcccaatc gtgctcagtg tcgaattcga ggaacaggat
     5341 gcgcattgcg ggagggtagg ttgggtcgtt ggtgggggca atggtcttgt tggcttccat
     5401 cttgcgcggg cgcggaggtc ggcgccctca tgcgcgggga ggcacttgtc gaacgcgcat
     5461 cggaactggc tggcagccca ggctcaatcc gctcacgcac aggcgaattg cctgcctctg
     5521 taataagtcc gttcgattcc ccctgttgaa tgagcaatga gcatgcgatt tagttggacc
     5581 ggtctgctgt tggcaccact cctggtcccg atgctgctga gcgcagcatt gtcgggcact
     5641 atgggcggcg accacgcggc gttcgggttt ctgatcctgc tggttccggg ctgtatcatc
     5701 tcgtacggcg ccacgatctt cctgctgttg ccttgcatgt ttgtcttgtc gcgctgccgg
     5761 ccgatgacgg gcgtctcggt ttgccttctg ggactggctc tgggcatggc ggtatatatc
     5821 ccggtaacct ttctcgtatg gggctcgagc ggccccgatt ccgggccgcc ggaggaaagt
     5881 ttcttcacgt ttttcc
//
LOCUS       DATAVD010001804         1983 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1470385, whole genome shotgun sequence.
ACCESSION   DATAVD010001804 DATAVD010000000
VERSION     DATAVD010001804.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1983
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1470385"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..1315)
                     /locus_tag="VHX39_34470"
     CDS             complement(59..1315)
                     /locus_tag="VHX39_34470"
                     /inference="COORDINATES: protein motif:HMM:NF023431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3500 domain-containing protein"
                     /protein_id="HEX3996303.1"
                     /translation="MSNNFRDLIPPPDHPRIAGITERDAYSHAANALATRPRVQGLLA
                     ERRARLEQPFRGITTNGDVVPDLYTLADEAAPTGAMVEAAHVVLAVASDVERNRLRFA
                     VDAPQWRMWSNPELYFDRFGLRLDELGHALREAILGLLHASLSAKGYAKARGAMRTNG
                     FLGELVNAPRVMNEFSYNFSLFGEPSLTEPWGWNLFGHHLCLNCFVLNRQMVLSPDFV
                     GAEPNCIDCGPYAGLALFQDEERLGLELMRALPEELQDRVRVYQLMHDPAMPEGRWHP
                     ADQRHLGGAYRDNWIIPHEGVPVREFPTAQRQRLLELTAAYFNILPSGPFEARMRQIE
                     RHLDATYFCWIGRSGDEDPFYYRIQSPVAMIEFDHHSGVFLTNTEPAKCHIHTVIRTP
                     NGNDYGKDLLRLHYAQVHGVPAPGRG"
     gene            complement(1318..>1983)
                     /locus_tag="VHX39_34475"
     CDS             complement(1318..>1983)
                     /locus_tag="VHX39_34475"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3996304.1"
                     /translation="VGMSVAEARERNDEAIEILDKALAAPVTSHSGKYWRFTDLRLVP
                     RPLQRPHPPKWVTVISEESARKAARRGAKICTGFHPGERVRSIFDAYRDEAARVGTPS
                     GRDQIALRRQISIGADDAAVRAASKVREHQMRSRLLADPRLSAPEREVLDTPVSHAFS
                     IGSDEFIAGSPGNVAEQTIAQCHAVGAGHFLATFDRSGSREQLRDAWDMFGSEVIPAL
                     RRA"
BASE COUNT          410 a          657 c          550 g          366 t
ORIGIN      
        1 gtcaaaatcc gcacgtggcc gcgcgtttct cgtaacaaaa tcgccatgtc ccctcccctt
       61 atccgcgtcc cggtgccggc actccatgca cctgagcgta atgcagccgc aaaagatcct
      121 tgccatagtc gttgccgttc ggcgtcctta tcaccgtatg gatatggcac ttcgccggct
      181 cggtgttggt caggaacacg ccggagtggt ggtcgaactc aatcatcgcc accggacttt
      241 gaatacggta ataaaacgga tcctcgtcgc cggagcggcc gatccaacag aaatacgtcg
      301 cgtccaaatg ccgttcgatc tgccgcatcc gcgcctcgaa cggtccactg ggaagtatgt
      361 tgaaatacgc ggcggtcagt tccagcagcc gctgacgctg cgcggtggga aactcacgta
      421 ctggcacgcc ttcatgcgga ataatccaat tgtcacgata agcgccgccg aggtggcgtt
      481 gatcggccgg atgccagcgt ccttccggca tcgcggggtc atgcatcaac tgataaaccc
      541 gcacccggtc ttgcaattcc tccggcaaag cgcgcatcag ttccagccca agccgttcct
      601 catcctggaa cagcgccagg ccggcatagg gcccgcaatc gatacagttc ggttcggcac
      661 cgacaaaatc cggcgacagc accatctgcc tgttaagcac gaagcaattc aggcacaaat
      721 ggtgaccgaa caggttccag ccccacggtt cagtcagcga cggctcaccg aacaggctga
      781 aattgtagct gaactcattc attacgcgcg gtgcgttgac cagttcgcca agaaagccgt
      841 tggtccgcat cgcaccacgc gccttggcat aacctttggc gctcagactg gcgtgcaaca
      901 atcccagaat ggcctcgcgc aaggcatggc ccagttcgtc cagtcgcaaa ccgaaacgat
      961 cgaaatataa ttccggattg ctccacatcc gccattgcgg cgcgtcgacg gcaaagcgca
     1021 gccggttcct ctccacgtcg ctcgcgaccg ccaaaacgac atgggctgcc tccaccatgg
     1081 caccggtcgg ggccgcttca tcggccagcg tataaagatc cggcaccaca tcgccattcg
     1141 tggtgatgcc gcggaagggc tgctccagcc gggcccgccg ttccgccagc aagccttgca
     1201 cccgaggccg cgtcgccaaa gcattcgccg catggctgta agcatcgcgt tcagtgatgc
     1261 cggcgatgcg tggatggtcc ggcggcggaa taagatcgcg aaaattgttg ctcatggtca
     1321 ggcccgtcgt aatgccggaa tgacttcgct gccgaacatg tcccaggcat ctcgcagttg
     1381 ctcgcgcgag ccggaacgat cgaatgtcgc caggaaatgg cccgcgccaa ctgcatggca
     1441 ttgcgcaatc gtctgttccg ccacattgcc cggcgaaccc gcaatgaatt cgtcgctgcc
     1501 gatagaaaac gcgtgcgaga ccggtgtatc cagcacctcc cgctccggcg cggacaatcg
     1561 cggatcggcc agcaatcgcg aacgcatctg gtgttcccgg accttcgagg ccgctcgcac
     1621 cgcggcatcg tcggcgccga tcgagatctg acggcgcaac gcaatctggt ccctcccgga
     1681 cggagtacca acgcgcgctg cctcatcgcg ataggcgtca aagatgctgc gcacccgctc
     1741 acccggatga aaaccggtgc agatcttcgc gcctcgccgc gctgccttgc gagcagactc
     1801 ctcgctgatg acggtgaccc atttcggcgg atgcggacgc tgcaacggcc gcggcaccag
     1861 gcgcaaatcg gtaaatcgcc aatattttcc cgaatgcgag gtcaccggcg cggccagtgc
     1921 tttatcaaga atttcgatcg cttcatcgtt acgctcgcgc gcctcggcca cgctcatccc
     1981 gac
//
LOCUS       DATAVD010001805         2311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1470412, whole genome shotgun sequence.
ACCESSION   DATAVD010001805 DATAVD010000000
VERSION     DATAVD010001805.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1470412"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..480
                     /locus_tag="VHX39_34480"
     CDS             <1..480
                     /locus_tag="VHX39_34480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996305.1"
                     /translation="LKIPGSTRLRTLPDGLWLNFGGTFAEPFVDILAIEACSTIQNLL
                     DKRSRFAPSTHSMMCLCPTEWLLAPITPTDPTPRWRTTGVIPHEPFNDVVIPVREMRV
                     LYGLKSDHYKGFARHQLPHAHEFFVPMETLTEENSEDNPALRELIARTSVSANFLSP"
     gene            complement(705..1661)
                     /locus_tag="VHX39_34485"
     CDS             complement(705..1661)
                     /locus_tag="VHX39_34485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEX3996306.1"
                     /translation="MATHRITSTPETVRWGVFDASFPPLITIDSGDTVVLECLSGGPE
                     VMPPPVSGLTIPPALAAIHAANIPRAPGHLITGPVGIAGAEPGDMLEVRIDGIELGND
                     WGYCGFRPLAGTIPEDFPEKYLSHIPVDRDRKTCRLPWGTELNLSPFFGVMGVAPPPN
                     YGAISTIQPREHGGNLDNKELSEGSTLFLPVWAPGALFSAGDGHGVQGDGEVCINALE
                     ICLTGTFTLTLHKGGGARDPVLSYPRAETASHFISMGMHEDLDVAMKTALRQMIAFIT
                     SRTNLSRQEAYQFCSLAVDFHVTQTVNGEKGVHGLLKKGLLF"
     gene            complement(1768..2028)
                     /locus_tag="VHX39_34490"
     CDS             complement(1768..2028)
                     /locus_tag="VHX39_34490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996307.1"
                     /translation="MLTVSSARKPPFTFAVRQALQGVNDSVMVADLLFLEAWEIQPSP
                     NLGVTLRAGQIRRANPDLAAAIDAELKGRPAFPAAPAQGGKD"
     gene            complement(2195..>2311)
                     /locus_tag="VHX39_34495"
     CDS             complement(2195..>2311)
                     /locus_tag="VHX39_34495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007282990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HEX3996308.1"
                     /translation="ASLHLAKVGAKLTKLSTKQSEYLGIAEQGPFKHDLYRY"
BASE COUNT          478 a          765 c          665 g          403 t
ORIGIN      
        1 ctcaaaatcc ccggcagtac ccgattgcgt accctccccg atggcctctg gctcaatttc
       61 ggcggcacct tcgccgaacc gttcgtcgat atcctggcga tcgaggcctg cagcaccatc
      121 cagaacctgc tcgacaagcg atcccgattc gcgccgagca cccattcgat gatgtgcctc
      181 tgcccgaccg aatggctgct tgcaccgatc accccaaccg acccaacacc gcgctggcgg
      241 accaccggcg tgatcccaca cgaacccttt aacgacgtgg tgatcccggt acgggagatg
      301 cgtgtgctgt acggcctcaa gagcgaccat tacaaaggct tcgcccggca tcagctgccc
      361 cacgcgcacg aattcttcgt cccgatggaa acgctgaccg aggaaaacag cgaggacaac
      421 ccggcgctcc gcgaactgat cgcccgaacc tccgtgtcgg cgaatttcct cagtccctag
      481 tgccctgccc ctgaagttcg tcgcatcgtg cggcgggctc ctgggaccag caggccactg
      541 aaaacaaaga gctagcgtcg gaccccagcg cttgattccg gaagcgctgc gcggatcggc
      601 atacgctccg gcgccggcct ctcgtcatca ccgcggccga cgggccgcca tccacggctc
      661 tgtttggaca ggcagaggac gtggatgccg gcatacacca agaattagaa cagcagcccc
      721 ttctttagca gcccatgcac gcctttctcc ccattgaccg tctgcgtgac gtggaaatcc
      781 accgccaacg agcagaactg gtaggcctcc tgacgagaaa gattcgtccg gctagtgata
      841 aaggcgatca tttgccgcag tgcggttttc atcgcgacat ccaggtcctc gtgcatgccc
      901 atcgaaatga aatggctggc ggtctccgcc cgcgggtagc tcagcacagg atcgcgcgcg
      961 ccaccgcctt tgtgcagggt cagggtaaag gtgccggtca ggcagatttc cagcgcattg
     1021 atgcaaacct cgccgtctcc ctgcacgccg tggccatcgc cggcggaaaa cagcgcgccc
     1081 ggtgcccata ccggcaggaa caaggtcgat ccctcgctca gttccttgtt gtccagattg
     1141 ccgccgtgct cgcgcggctg aatggtggaa atcgcaccgt aattcggcgg cggcgccacg
     1201 cccatcacac cgaagaacgg cgacaggttc agttcggtgc cccacggcaa ccggcaggtc
     1261 ttgcggtcgc ggtcgaccgg aatgtgcgac agatattttt ccgggaaatc ctcgggaatg
     1321 gtcccggcca gcggacggaa tccgcaatac ccccagtcgt tgccaagctc gatcccatcg
     1381 atgcggactt ccagcatgtc accgggttcg gcgccggcga tgccgacggg accggtgatc
     1441 agatgtcccg gagcccgagg gatattcgcc gcatggatcg ccgccaatgc cggcggaatg
     1501 gtcaaacccg acacgggggg cggcatcacc tccgggccac cggataggca ctccagcacg
     1561 accgtatcgc cggagtcgat cgtgatcagt ggtggaaagc tggcatcgaa gacaccccag
     1621 cgcacggttt ccggtgtcga tgtgatacga tgcgtggcca tgcggcgccc cctgggcatg
     1681 aacgataatg ccggatgcca ccacatcggc acaggcggca caaccggcga aatcgcgcca
     1741 gggcccggcg ggcgacgcga ccccgaccta atccttcccg ccttgggccg gcgcagcggg
     1801 aaaagccggc cgacccttca attcggcgtc gatcgccgcc gcaagatcgg gattggcccg
     1861 cctgatctga cccgcacgca gcgtcacgcc gagattcggc gatggctgaa tctcccacgc
     1921 ttccaggaac agcaggtccg ccaccatcac tgaatcgttc acgccctgca acgcctggcg
     1981 cacggcaaat gtgaacggtg gtttccgcgc ggaagagaca gtcaacatca gagaattcct
     2041 aatcagcact tgacacggcc ttcctcgtat ctttccagca cgatgacctg ggaagacaaa
     2101 aacgaagacc gcgcggcatc caattagggg gggaggatgt gattcaccag cctgtcgcca
     2161 tgacaagccg gtgaattaaa ttctgtcaaa ccaatcagta ccggtaaaga tcgtgtttaa
     2221 acggcccttg ctcggcaatg ccaagatatt ccgactgctt ggttgacagc tttgtgagct
     2281 tggcgcccac ctttgccagg tgcagcgagg c
//
LOCUS       DATAVD010001806         1719 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3330756, whole genome shotgun sequence.
ACCESSION   DATAVD010001806 DATAVD010000000
VERSION     DATAVD010001806.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3330756"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..421)
                     /gene="rnhA"
                     /locus_tag="VHX39_34500"
     CDS             complement(<1..421)
                     /gene="rnhA"
                     /locus_tag="VHX39_34500"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HEX3996309.1"
                     /translation="MASDERVEIWTDGGCKPNPGPGGWAAILRFRGAEKELSGGHSAT
                     TNNRMELTAAAAALEALKRPSKVVVHTDSEYVKNGITRWMTGWVRKNWRGAGGDPVKN
                     LDLWQRLLAAEQPHDVEWKWVRGHGGDVMNERADQLAT"
     gene            complement(411..1370)
                     /locus_tag="VHX39_34505"
     CDS             complement(411..1370)
                     /locus_tag="VHX39_34505"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEX3996310.1"
                     /translation="MAVYTEVTDEALEAFLAEYDIGSLVAYRGIAEGVENSNYSLKTV
                     QGDFILTLYEKRVDPADLPWFLGLMEHLARRKITCPQPVRARDGEALRVLAGRHAAIT
                     TFLPGVWPRRVRVEHCRPVGAALAGLHLGGADYQPKRANALGSHGWRPLVDRCRARAN
                     EVQPDLVAELDATLNEILAAWPATLPQGHIHADLFPDNVFFLDDRLSGLIDFYFAATD
                     FLAYDVAICLNAWCFEADFSFNVTKGRAMLHGYETVRALSAEERAALPVLCRGAAIRF
                     LLTRLYDWVNTPEGAMVTRKDPMEYLRRLRFHRWAQDEHAYGI"
     gene            complement(1383..1685)
                     /locus_tag="VHX39_34510"
     CDS             complement(1383..1685)
                     /locus_tag="VHX39_34510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010512981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ETC complex I subunit"
                     /protein_id="HEX3996311.1"
                     /translation="MRARIYLPPKSAMQSGRSGHEWVLHYDSDTPERPDRLMGWIGGG
                     DTQAQVRLGFSTKEEAIAYAERNGIAYDLEIPRERRVRIKAYADNFSYRRTENWTH"
BASE COUNT          344 a          570 c          478 g          327 t
ORIGIN      
        1 ctgtggccaa ctggtctgcc cgctcgttca tcacgtcgcc gccatgaccg cgcacccatt
       61 tccactcgac gtcgtgcggt tgttcggcag ccaacagcct ttgccacaag tccaggtttt
      121 tcaccggatc acctcccgca cctcgccagt tcttccgcac ccaaccggtc atccaccgag
      181 tgatgccgtt cttcacgtat tcgctgtcag tatgaaccac caccttgctg ggccgtttca
      241 gcgcttccag agcagcagcg gctgccgtca actccatccg attgttcgtg gttgcggaat
      301 ggccacccga caactccttc tccgcgccac ggaaccgcag gattgccgcc caaccacccg
      361 gccccgggtt gggtttgcag ccgccatcgg tccagatttc cacccgttcg tcagatgcca
      421 taagcgtgct cgtcctgagc ccagcggtgg aagcgcaagc gtcgcagata ttccatggga
      481 tccttgcgcg tgaccatcgc gccttcaggc gtattgaccc agtcatagag ccgcgtgagc
      541 aagaaacgaa tggcggcccc tcggcacagc accggcagag cggcccgctc ttccgcggat
      601 aatgcacgga cggtttcgta gccgtgcagc atggcgcgcc ccttggtcac gttgaatgag
      661 aagtccgcct cgaaacacca ggcattcagg caaatcgcca cgtcgtacgc cagaaaatcc
      721 gtggcagcaa aatagaaatc gatcagtccc gacagacggt catcaagaaa gaacacatta
      781 tcgggaaaca aatcggcgtg gatgtgccct tgcggcagcg tcgccggcca cgccgccaga
      841 atctcgttca gcgtggcatc gagttcggcc accaggtctg gctggacctc atttgctcgc
      901 gccctgcaac gatcgaccaa gggtcgccat ccatgcgaac ccagtgcatt cgcgcgtttt
      961 ggctggtagt cagcacctcc gaggtgcaat ccagccaatg ccgcaccaac cgggcggcaa
     1021 tgctcaaccc gcacgcggcg aggccacacg cccgggagaa aggtcgtaat ggcagcgtgt
     1081 ctgccggcca gcactcgcag ggcctcccca tcccgcgcgc gaaccggctg agggcaggta
     1141 attttgcgtc gggccagatg ttccatcagg ccgagaaacc atggcaaatc agcgggatct
     1201 acccgcttct cgtacaacgt cagaatgaaa tcgccctgca cggtcttaag tgagtagttg
     1261 gagttctcca ccccttcggc gatcccgcga taggcgacga gcgagccgat gtcgtattcc
     1321 gccagaaatg cttccaacgc ttcgtcggtg acttcggtgt aaacggccat cgccgcggac
     1381 gctcaatggg tccagttttc agtccggcga tagctaaaat tgtcggcata ggccttgatc
     1441 cgcacccgcc gctcccgagg gatctcgagg tcgtacgcaa tgccgttgcg ctcggcataa
     1501 gcgatcgcct cctccttggt cgaaaaacca agtcgcacct gggcctgcgt gtcgccgccg
     1561 ccaatccagc ccatgagacg gtccggccgc tccggtgtgt cggaatcata atgcaggacc
     1621 cattcgtggc ccgatcgccc agattgcatg gcagacttcg gcggcaaata gatgcgggcc
     1681 cgcatggaaa tgcactccaa tcatcgttgg tcggggcgg
//
LOCUS       DATAVD010001807         4957 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_918933, whole genome shotgun sequence.
ACCESSION   DATAVD010001807 DATAVD010000000
VERSION     DATAVD010001807.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4957
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_918933"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..401)
                     /locus_tag="VHX39_34515"
     CDS             complement(<1..401)
                     /locus_tag="VHX39_34515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX3996312.1"
                     /translation="MHNTEEIWRLVDAKQDTFNALSDRVWEIPELCYGEFKSCAEHTA
                     MLREQGFRVTENVAGIPTAVMGEAGEDGPVIAILGEYDALPGLSQEAGVAEQRPLPGP
                     GFGHGCGHNMLGAASLLAATAVKDYLAAHGV"
     gene            complement(401..958)
                     /locus_tag="VHX39_34520"
     CDS             complement(401..958)
                     /locus_tag="VHX39_34520"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: protein motif:HMM:NF015319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEX3996313.1"
                     /translation="MRCSWAEGADATMQAYHDTEWGVPHHDDRALFELISLEGAQAGL
                     SWRTVLARREAYREAFHGFDISRVAGMTDAALTSVLTDSGVIRHRQKIWSVRDNARTA
                     LAVIETHGSLDAWLWDFVGGKPIVNRWRKMEQVPATTEVSDRMSKVLKKQGFRFVGST
                     ICYAFMQATGMVDDHLVTCTVRGTK"
     gene            complement(1463..2623)
                     /locus_tag="VHX39_34525"
     CDS             complement(1463..2623)
                     /locus_tag="VHX39_34525"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3996314.1"
                     /translation="MTTILTDAVLLGMAERAAGYDRENKFFHEDFADLRKSGYLTMAV
                     PKELGGAGLNLVEAGHQTRRLAYHAPATALGTNMHIYWTGIAADLWRMGDRSLEWLLK
                     DAVAGEVFNAGHSERGNDLPVLLSTSKAEKVDGGFRFTGHKMFGSLMPVWTRCGLHGM
                     WADAPGGPQIVHGFMPRDTAGYRIVETWDTMGMRATRSDDIVLDGAFVPDRMIARMVP
                     AGGADVFVLALFAWGLLGFGNVYCGLAQKAIDTVVPSLKAKSALAVSRSMAYHPGIQH
                     AVAEMRLALDPVAPLLDKVANDWATGVEHGHGWPAQIVSAKYHAVEACFRVVDLAMEL
                     SGGGGMFRGTELERIFRDARCGRFHPANTFLTHEIVAKTTLGIGLDEQPRWG"
     gene            2782..3513
                     /locus_tag="VHX39_34530"
     CDS             2782..3513
                     /locus_tag="VHX39_34530"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3996315.1"
                     /translation="METRNGYGQFCPVAMAAEVLCTRWTPLLVREMIAGSTRFNDLRR
                     GVPRMSPALLSKRLGELEEAGIVERFKGRGVEEYRLTAAGMALRGVIEGLGFWGQRWV
                     ETELSLKNLDPSLLMWDMRRNLDMTPLPPRRCTIQFLYPELSESRQNWWLVVEPARDA
                     TETRGADLCYTDPGFEVDLYVESSLRTMTSIWMGFSTVADELRAGRLQMSGSVALRES
                     MQRWLGLSPFAKGRAPKELEPVMGK"
     gene            3636..4469
                     /locus_tag="VHX39_34535"
     CDS             3636..4469
                     /locus_tag="VHX39_34535"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3996316.1"
                     /translation="MDISGKTAIVTGAASGIGLGIATALAEAGANVVMADIQKDAVEQ
                     AAHGLSGTNKRVMPLRIDVTVEQSVVDVLAEAERAFGKLHIACNNAGVPMHGTRLIDV
                     PVADWNFVMGVNIWGIIHGIRHFVPAILKHGEEGHVVNTASVAGFQNRRGTDQGPYSM
                     TKYAALSLSEALELELEGTNVGVSVLCPGPIATNIARGARNRPEHMGGPLVRDRDEAM
                     LAQRLATTGLDPMKVGERVVDAIRTKTFYAFVSAVPADVIRARHRRIEEALNSEWVTH
                     Y"
     gene            4572..4856
                     /locus_tag="VHX39_34540"
     CDS             4572..4856
                     /locus_tag="VHX39_34540"
                     /inference="COORDINATES: protein motif:HMM:NF016875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEX3996317.1"
                     /translation="MILSYRDRRTERFGQGAFIRVFQGFDQQAERRLAILNAAPSLGT
                     LRDLPSNRFEAFRGDRAGQFSIRINQQWPICFEWPDGQAGPSNVEIVEYH"
BASE COUNT          935 a         1518 c         1590 g          914 t
ORIGIN      
        1 ttgacgccat gcgccgccag gtaatctttc accgccgtgg ccgccaacaa cgatgcggcc
       61 cccaacatgt tgtgtccgca gccatgacca aatcccgggc cgggcagggg ccgttgttcg
      121 gccaccccgg cctcctgcga caggccgggc agggcgtcgt actcgccgag gatggcgatc
      181 accggcccgt cctcaccggc ctcgcccatg acggcagtgg gaatgccggc aacgttctcg
      241 gtgacccgga aaccttgctc acgcagcatc gcagtgtgct ccgcgcagga tttgaattcg
      301 ccatagcaga gctcgggaat ctcccacacg cggtcggaca gcgcgttgaa cgtatcctgc
      361 ttcgcgtcga ccagccgcca gatttcttcg gtattgtgca ttacttcgtt cctctaacgg
      421 tacacgtcac cagatgatcg tcgaccatgc cggtcgcctg catgaacgcg tagcatatcg
      481 tggagccgac aaaccggaaa ccctgctttt taagcacctt gctcatgcgg tcggacacct
      541 cggtggtggc aggcacctgc tccatcttgc gccagcgatt gacgatcggc ttcccgccga
      601 cgaagtccca cagccaggcg tcgagactgc cgtgcgtctc gatgaccgcc agcgccgtgc
      661 gagcgttgtc gcgcaccgac cagatctttt gccggtgccg gatcacgccc gaatcggtca
      721 gcaccgaggt caacgctgca tcggtcatcc cggcgacccg gctgatgtcg aaaccgtgga
      781 acgcctctcg atacgcctcc cttcgcgcca gcaccgttcg ccaggacaag cccgcctggg
      841 cgccctcgag cgaaatcaac tcgaacagag cgcgatcgtc gtgatgtggc acgccccact
      901 cggtgtcgtg ataggcctgc atcgtggcgt cggcaccttc ggcccaggaa caacgcatcg
      961 gaaagtgccc caacagcaat gaaggctccc aggttacccc gggagccttc gcattgtgag
     1021 tggctgtccg ttgccggacc ggagaattct acgccgccgc ggacgcgccg gcgatccagg
     1081 tcatggcaag gtatgccacc atacaatgag acacaggatc acctcctttc agttgttgct
     1141 acgaccagag gacactgcac gcgaatcgca gtgcgatgca agaaaagttt tccgccggct
     1201 tattccgccc ccaactgaat tccttcgcca atggaagaat gagcacgccg ggcaaactga
     1261 tggcggcgga acagcagatc gtggtggcaa acgtcagcgc gaccatgatc catccatagt
     1321 ggatccggtg acctgcgagc cacggagcct aagacttcgc gaacatgaca aacctgcaac
     1381 cgcggttgct gccgcggcct ttcaacgttt cgacgtgagg ggtggcgcgg tgacggccca
     1441 ggccgccacc ggtgcgtttg ggtcagcccc agcgaggctg ctcgtcgaga ccgatcccga
     1501 gcgtggtttt cgccacgatt tcgtgcgtca ggaacgtgtt cgccgggtgg aaacgtccgc
     1561 agcgggcatc tcggaagatc cgctccagtt cggtgccgcg gaacatcccg ccaccaccgg
     1621 acaattccat ggcaaggtcg acgacacgga agcaggcttc caccgcatgg tatttggccg
     1681 aaacgatctg tgccggccaa ccgtgaccgt gctcgacgcc ggtggcccaa tcgtttgcca
     1741 ccttgtccag cagcggcgcg acgggatcga gcgccagccg catctcggcc acggcatgct
     1801 ggatgccggg gtgataggcc atcgaccggc tgaccgcgag cgcgctcttc gccttcaggc
     1861 tgggaaccac ggtgtcgatc gccttctgcg ccagcccgca atagacattg ccgaacccca
     1921 acagccccca ggcgaacaat gcgagcacga agacgtcggc gcctccggcc gggaccatgc
     1981 gggcaatcat ccggtcggga acgaacgcgc catccagcac gatgtcgtcg ctgcgggtcg
     2041 cgcgcatgcc catcgtgtcc caggtttcga caatgcgata accggcggta tcccgcggca
     2101 tgaagccatg cacgatctgt ggaccgccgg gagcgtcggc ccacatgccg tgcaggccac
     2161 aacgcgtcca caccggcatc aggctgccga acatcttgtg gccggtgaaa cggaagccgc
     2221 cgtcgacctt ctccgccttg ctggtcgaca gcaggaccgg aaggtcgttg cctcgctcgg
     2281 aatggccggc gttgaacacc tcgccggcga cagcatcctt cagcagccac tcgagcgagc
     2341 gatcgcccat gcgccacaga tccgcggcga tcccggtcca gtagatgtgc atgttggtgc
     2401 caagcgcggt cgccggtgcg tgatacgcga ggcggcgcgt ctggtgaccg gcctccacca
     2461 gattaaggcc ggcaccaccc agttccttgg gcacagccat ggtgaggtag ccggacttgc
     2521 gcaggtcggc gaagtcctca tgaaaaaatt tgttttcccg gtcgtagccg gcagcgcgtt
     2581 ccgccatgcc cagaagcacg gcgtccgtca gaattgtcgt catttctggc tctccttgcg
     2641 atcattcgcg tgacccgtct tgggacggga ggcttctgac cggttcggag gcgaactctc
     2701 cagttcagtt tgtgaactgg tcggcgaccg ccgaacaatg taattgtcct gttacaaaag
     2761 cggctaacgc tggaggagaa catggaaaca cgcaacggct acggccagtt ttgcccggtc
     2821 gccatggcgg ccgaggtgct gtgcacgcgc tggaccccgc ttctggtgcg cgaaatgatc
     2881 gccggcagca cgcggttcaa cgatctgcgc cgcggcgtgc cgcggatgtc tcccgcgctg
     2941 ctgtccaagc gtctgggcga actggaggag gcagggatcg tcgaacgctt caaaggacgt
     3001 ggcgtcgagg aataccgtct gaccgcggcg ggaatggcgt tgcgcggcgt gatcgaaggt
     3061 ctcggattct ggggccaacg ctgggtggaa accgagcttt ccctgaagaa cctggatccg
     3121 tctctgctga tgtgggacat gcggcgcaac ctcgacatga ccccgctgcc gccgcgccgg
     3181 tgcacgattc agtttctgta tccggaatta tcggaatcac ggcaaaattg gtggcttgtg
     3241 gttgagccgg cgcgtgacgc aaccgaaacg cgcggtgcgg atctgtgcta taccgacccg
     3301 ggatttgagg tcgacctgta cgtcgaatcc agtctgcgga cgatgacgtc gatctggatg
     3361 gggtttagca ccgtcgccga cgaattgcgc gcgggccggc tgcaaatgag cgggagtgtc
     3421 gcgttgcgcg aatcgatgca gcgatggctt ggcctcagcc cgttcgcaaa gggaagggcg
     3481 ccgaaggagc tcgagccggt gatgggtaag taaccggccc gaacggttgt cgtgattttc
     3541 gttcggcgca cgtgttgcgc ccagggagcg gctggcattt cgccggcgcc tgggccgtgc
     3601 cagactttgg ctcccatcgt ctgaaaggcg cagtcatgga tatctcgggc aaaactgcca
     3661 ttgtcactgg tgccgcttcc ggcatcggcc ttgggatcgc caccgcgctc gccgaggccg
     3721 gtgccaacgt ggtcatggcc gacatccaaa aggacgcggt cgagcaagcg gcgcatggcc
     3781 tgtccggcac caacaaacgc gtcatgcccc tgcgcatcga tgtaacggtc gagcagtcgg
     3841 tcgtcgatgt cctcgccgaa gcggagcgtg cgttcggcaa gctgcatatc gcgtgcaata
     3901 acgccggcgt gccgatgcat ggcacacgat tgatcgacgt gcccgtcgcc gactggaatt
     3961 ttgtaatggg cgtcaacatc tggggcatca ttcacggcat ccgccacttc gttcccgcga
     4021 tcctgaagca cggggaggag gggcatgtgg tgaacactgc ctcggtcgcc gggttccaga
     4081 accgccgggg gaccgaccag gggccgtatt cgatgacgaa gtacgccgcg ctgtcgctgt
     4141 cggaggcgct ggagctcgag ctggaaggca ccaacgtcgg cgtatcggtg ctgtgtcctg
     4201 ggccgatcgc gacaaatatc gcgcggggtg cgaggaaccg gccggagcat atgggtggac
     4261 cattggtgcg ggatcgggac gaggcgatgc tggcgcagcg gctggcgacg acgggactgg
     4321 acccgatgaa ggtgggcgag cgggtggtgg acgcgatccg gaccaagacg ttctacgcgt
     4381 ttgtcagtgc ggtgccggcg gatgtcattc gtgcgcggca ccggcggatc gaggaagcgc
     4441 tgaactcgga gtgggtgacg cattattgag gattcgtagc caagcggaag gtggagaggt
     4501 cgtacagcgc ggtgttcata aacgtccttg acgcttgacg tcactcgtca agaggttcat
     4561 tggttcggcg aatgatccta agctatcggg acaggcgcac tgagcgattt ggccaaggag
     4621 cattcatcag agtgttccag gggttcgatc agcaagccga gcggcggctt gctatcctga
     4681 acgctgctcc ttcgctcggc accctgcggg atttgccgag caatcgattt gaagcgttcc
     4741 gtggggaccg ggccgggcaa ttctccatcc gtatcaatca gcagtggcct atctgcttcg
     4801 aatggccgga cgggcaggca ggaccgagca acgttgaaat cgtagagtat cattgatgaa
     4861 aggagaggcc atgatgttca gacgcgtcgt gcatcccgga gtggttctta aagatgagct
     4921 ggacgctctg ggcgtgaccc tgactgaatt cgcacgt
//
LOCUS       DATAVD010001808         3188 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2595116, whole genome shotgun sequence.
ACCESSION   DATAVD010001808 DATAVD010000000
VERSION     DATAVD010001808.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3188
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2595116"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..999)
                     /locus_tag="VHX39_34545"
     CDS             complement(73..999)
                     /locus_tag="VHX39_34545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEX3996318.1"
                     /translation="MASAMELNWLEDYLELCRTGNFSRAAEARHMTQPAFSRRIRALE
                     EWAGVTLFDRSAQPIVLTAAGHEFQPLAATLIRRIEDARTHVREVAGVELATIRLAAT
                     HALSLIFFPDWLKRLEAGGLHCCVHLTSDTLDAVEALLRDGQAHFLLCHAYESLVPHL
                     PGEEFTSTVVANDRLLPCAAPALVSQWPAKDGLIQAAPLLAYSRGFGLGRILRTIVGP
                     RLPRLISAPAMTADLAGSLRALCLDGRGLAWLPATMVAEDLAAGRLQTCGEEGWAVPV
                     EVRLFRPCSRLSPKAEELWRLNRPGFAEGGSV"
     gene            1085..2248
                     /locus_tag="VHX39_34550"
     CDS             1085..2248
                     /locus_tag="VHX39_34550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006449176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX3996319.1"
                     /translation="MGIVEIRERTFPIASPIANAYIDFSKMTLSLVAIITDVIRDGKP
                     VVGYGFNSNGRYGQGALMRERFIPRVMEADPASLLNEAGDNLDPHKIWDTMFRNEKPG
                     GHGERSVAIGTMDMAVWDATAKIAGKPLFQLLADTHGRTANPKVFVYAAGGYYYPGKD
                     NTKLKDEMQSYLDRGYTVVKMKIGGVPLKDDLGRIEAVLGMLPAGCKLAVDANGRFDT
                     KTAIDYAKGLSAYDLFWYEEAGDPLDYELQAELAQHYAKPMATGENLFSMQDARNLIR
                     YGGMRKDIDWLQFDCALSYGLVEYLRTLKMLASYGWSASRCIPHGGHQMSLAIAAGLG
                     LGGNESYPDLFQPFGGFPDGVKVEGSYVTLPPLPGIGFEGKSDLYKVMSELSA"
     gene            2327..>3188
                     /locus_tag="VHX39_34555"
     CDS             2327..>3188
                     /locus_tag="VHX39_34555"
                     /inference="COORDINATES: protein motif:HMM:NF012593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HEX3996320.1"
                     /translation="MAENAPINQGTSRSWLGPLWLQVLIGAVLGIAVGILWPHVAAQT
                     AFLSAGFIKLIRMLLAPVIFLTVAVGIARMGNLREVGRVGIKAIIYFEVLSTISLLIG
                     VLTAQIVKPGVGMHVDPHSLNASLVAGYAHSAHNLTFESFLLNLIPSSITQAFAQNQM
                     LQVILFAVLFGVALAQLRERVQKMVDVLDELMTSLFSIVRIVMYLAPLAAFGGMAFTI
                     GKYGLGSVISLGEFVACAYGASAVFVFVVLGLVARLAGLRLLPLLRYLREELLIVFST
                     SASEAVLPQVM"
BASE COUNT          611 a          928 c         1001 g          648 t
ORIGIN      
        1 gcggggcggc gccgcgttat ttattgcatc gttggtgtga tttgcccgct ggggagacag
       61 ggatagcgta acttaaaccg aaccgccttc ggcaaaaccg gggcggttca gccgccagag
      121 ttcctcggcc ttcggagata gccggctgca ggggcggaac agccggactt ccaccggcac
      181 tgcccaaccc tcttcgccac aggtctgcag ccggccggct gccaaatcct ctgccaccat
      241 ggtcgctggt agccacgcca gtccacgtcc atccaggcac agcgcacgca aagagccggc
      301 gaggtcggca gtcatcgctg gcgctgagat caagcgtggc agacgaggtc caacgatggt
      361 acgcaagatt cgccccagcc cgaagccacg gctgtaagcc agcagcggtg ctgcttggat
      421 caacccatcc tttgccggcc attgcgagac cagagcaggg gcagcgcacg gtagcagccg
      481 gtcgttcgcg accacggtcg aggtaaattc ttctcctggg agatgtggta cgaggctctc
      541 ataggcatgg cagagcaaaa aatgagcctg gccgtcacgc agtagggctt ccactgcatc
      601 cagcgtgtcg gaggtcagat gcacgcagca atgcaggccg cctgcttcca gccgcttcag
      661 ccagtcagga aaaaagatta acgagagcgc atgcgtggcg gccaacctga tggtcgcgag
      721 ctccacaccc gcaacctcac gcacatgcgt tcgcgcgtct tcgatgcggc ggatcagcgt
      781 tgccgccagc ggctgaaatt cgtgcccagc ggcggtcagg acgatgggct gcgcagagcg
      841 gtcgaacaat gtgacgccag cccattcttc cagagcgcgg atgcgccggc tgaaagccgg
      901 ctgcgtcatg tgtctggctt cggccgcgcg tgaaaaatta ccggttcggc acagctccaa
      961 atagtcctct agccaattca gttccatggc tgatgccatt ttgcctgacg caatagaaaa
     1021 tcagcattgg tcatggtccg gcgcgaagtg acacatgtac agaccaacca actggaggaa
     1081 tattttgggc atcgtcgaaa tccgcgaacg gacctttccc atcgcttcgc ccattgccaa
     1141 cgcctatatc gacttcagca agatgacgtt gagtttggtg gccatcatca cggatgtgat
     1201 ccgcgatggc aagccggtgg tcggctacgg cttcaactcc aatgggcgct acggccaggg
     1261 cgcgctgatg cgggagcgct tcattcctcg ggtgatggag gccgatcccg cctccctgtt
     1321 gaatgaggcc ggagataacc tggatccgca caagatctgg gacaccatgt tccgcaatga
     1381 gaagccgggc ggtcatggtg agcgctctgt cgcgatcggc acgatggaca tggcggtgtg
     1441 ggatgcgacc gcgaagatcg ccggcaagcc gttgtttcaa ttgctggcgg acacgcatgg
     1501 gcgcaccgcc aacccgaagg tgtttgtcta tgccgcgggc ggttattact atccaggcaa
     1561 ggacaacacc aagctgaagg atgagatgca aagctatctc gaccgcggct acacggtggt
     1621 gaagatgaaa atcggtggcg tgccgctcaa ggacgatctc gggcgcatcg aggcggtgct
     1681 gggcatgctg cccgccggct gcaagctggc ggtggacgcc aatggccgtt tcgacaccaa
     1741 gaccgcgatc gattacgcca aggggctctc cgcctacgat ctgttctggt acgaggaggc
     1801 gggcgacccg ctggactacg agctgcaggc ggaattagcc cagcattacg cgaagccgat
     1861 ggcgaccggc gagaacctgt tctcgatgca ggatgcccgc aatctgattc gctacggcgg
     1921 catgcgcaag gatatcgact ggctgcaatt cgattgcgcg ctgagctacg gtctcgtcga
     1981 atatctgcgc acgctgaaga tgctcgcttc ctatggctgg tcggcgtctc gctgtatccc
     2041 tcatggcggc caccagatgt cactggccat tgccgccggg ctcgggctgg gggggaacga
     2101 atcgtaccct gacctgttcc agcctttcgg tggcttcccg gatggcgtga aggtggaggg
     2161 cagttatgtg acgctgcccc cgctgcccgg tattggtttc gagggcaaga gcgatctcta
     2221 caaggtgatg tccgaactca gcgcgtaagc gccgccgccc ggcgccggag acaaccggcg
     2281 ccgggttctt ttgaagcaga acgaaaatag aaagggtggg aacatcatgg cggagaacgc
     2341 gcctataaat caaggaacgt cgagatcctg gctggggccg ctctggctgc aagttttgat
     2401 cggcgccgtg ttgggtatcg ccgtcggcat attatggccg catgtggccg cgcaaacggc
     2461 atttctttca gccggcttca tcaaattgat ccgcatgctg ctggcgccgg tgattttcct
     2521 gaccgtcgcc gtcggcatcg cccgcatggg caatctgcgc gaggttgggc gtgtcggcat
     2581 caaggccatc atctatttcg aggtgctctc aaccatctcg ctgttaatcg gcgtgttgac
     2641 tgcgcagatc gtcaagcccg gtgtcggcat gcatgtcgat ccgcattcgc tcaatgccag
     2701 cctggtggcc ggctacgcgc atagcgcgca caacctgacc ttcgagagct ttctgctcaa
     2761 tctgattcct tccagcatca ctcaggcctt tgcgcaaaat caaatgttgc aggtgattct
     2821 gttcgccgtg ctcttcggcg tggcgctggc gcagttgcgt gagcgggtac agaagatggt
     2881 ggacgtgctc gatgaattga tgacgtcgct gttcagcatc gtacgtatcg tcatgtacct
     2941 tgcaccgctc gcggcgtttg gtggcatggc cttcaccatt ggaaaatacg ggcttggtag
     3001 cgtgatctcg ctgggcgagt tcgtcgcctg cgcatacggc gcgtccgcgg tgttcgtgtt
     3061 cgtggtgcta gggctcgttg cgcgtctcgc cggcctgcgg ctgctgccgt tgctgcgcta
     3121 tctccgcgaa gaactgctga tcgtgttcag cacctccgcg tcggaggcag tgttgccgca
     3181 agtgatgg
//
LOCUS       DATAVD010001809         2339 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2595208, whole genome shotgun sequence.
ACCESSION   DATAVD010001809 DATAVD010000000
VERSION     DATAVD010001809.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2595208"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1809
                     /locus_tag="VHX39_34560"
     CDS             <1..1809
                     /locus_tag="VHX39_34560"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3996321.1"
                     /translation="SVRLLSRIVSGLGAANTVRDDLVPLAVLFLTISIVVIGLQFAGR
                     LTAIRANGVMLGSLQQQLHDKLLAMPPAFHDQNDLGETTTIVMQDAIVCQPMLTELIA
                     APFTLGATLISALVFLLESLHDLHDVPAAAQLVLIAVLMVVPPIGWWLFHRLAHAFDA
                     MRSAHSALGSEFANSAIAPNEVRLLGAARQRSRAFARRMSGLVTLRIRADTRLALSNQ
                     FQTAVPALLQAGFLTFAAMAATNDGAEAAGAILSIFYFVPKVIEPIDQLTRFFGSLQP
                     LWAQAARIGKVLDTSPRRSASGGPPMEAAPDVTFDRVTFGYPGVPEPTLNDFSHVFPA
                     GRITAVVGRSGTGKSSLLSLIDGLREPDSGTVKIAGRQVQSFDQEALCETIGVVSQFP
                     LFIDDTVRANFQLGHDGATDAEIEAAARATGLWPALEKLGENPLDAIVPRTAGRGLSG
                     GERRRLALTRVLLRRPKALLLDEPTTGVDQLSIGMLMEALRVACKGMTVIMVEHNLDV
                     VSGLADVVCCMEGGKFSDVGRPDELANRPSLFRELLAARERLTSTVGMELHSVSLPRI
                     GSGPAFDPWADQHDANSDAPANGEAMVPATSSAGAA"
     gene            1820..>2339
                     /locus_tag="VHX39_34565"
     CDS             1820..>2339
                     /locus_tag="VHX39_34565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996322.1"
                     /translation="MSDLTSLLDQHLHIPPRSECENTLRLLIRMGLMVIGAAEGSLLV
                     LNEETNELEFALTVGDPKSEAMLLGQRVPVGLGITGLAAATSRVQIGAPTFKDVRQSS
                     RGDTPASGPEAVMAAPVMAGERLVAVMTAVSFEKAKRFTNQDGKMFGGFAVIAGALVG
                     QNLRLAERDRRHP"
BASE COUNT          406 a          692 c          766 g          475 t
ORIGIN      
        1 tccgtgcggc tgctctcgcg tatcgtgtcc gggttgggcg ccgccaatac ggtcagggat
       61 gacctcgtcc cgttggcggt tttgttcctg accatcagta tcgttgtgat cgggttgcaa
      121 ttcgccggcc gcctcaccgc gattcgcgcg aacggcgtca tgctggggtc gttacagcaa
      181 cagctccatg acaagctgct ggccatgccg ccggcgttcc atgaccagaa cgatcttggc
      241 gaaaccacga cgatcgtcat gcaggacgcc atcgtgtgcc agccgatgct caccgaactc
      301 atcgccgcac cgttcacgtt aggggcgacg ctgatttccg cattggtttt tcttttggaa
      361 agtctgcacg atctgcacga tgtgccggcg gcggcgcaac tggtgctgat cgcggtcctg
      421 atggtggtgc cgccgattgg gtggtggctg ttccaccgcc ttgcccatgc gttcgacgcg
      481 atgcgatcgg cgcattccgc gttaggttcg gaattcgcca attccgcaat cgcgccaaac
      541 gaggtgcggt tgctgggagc ggcgcgccag cggtcccgcg cgttcgcgcg aaggatgagc
      601 ggccttgtga cccttcgcat tcgcgccgac acgcggctgg cgctgtcgaa ccagttccag
      661 acagccgtgc cggctttgtt gcaagccggc tttctgacct tcgcggcgat ggccgccacg
      721 aatgacggcg cagaggcggc cggcgcaatc ttgtcgatct tctactttgt tcccaaggtg
      781 atcgagccaa tcgatcagct gactcgcttc tttggcagcc tccaacctct gtgggcgcag
      841 gccgcgcgga taggcaaggt gctggacacg tcaccgcgcc ggtccgcttc cggcggccca
      901 ccaatggaag cggccccgga cgtcacgttc gaccgtgtga cattcggcta tcccggcgta
      961 cccgagccga cattgaatga cttctcgcac gtgtttccag ccggtcgaat cactgctgtc
     1021 gtgggccgct cgggaaccgg caagtcctca ttgctgtcgc tgatcgatgg gctacgtgag
     1081 cccgacagcg gaacggtgaa gatcgccggc cggcaggtcc agagcttcga tcaggaggcg
     1141 ctgtgcgaaa cgatcggagt ggtgtcgcag tttccattgt tcatagacga tacggttcgg
     1201 gccaatttcc aattgggtca cgacggcgcg accgacgccg aaatcgaggc ggcggcacgg
     1261 gcaaccggat tgtggcctgc attggaaaag ttgggggaga acccgttgga tgcgattgtg
     1321 ccacgcactg cggggcgcgg cctatcgggc ggcgagagac gtcgtttggc gttgacccgt
     1381 gtgctgttga ggcgacctaa agcattgctg ctcgatgaac ccacgaccgg tgtcgatcag
     1441 ttgagtatcg gtatgctgat ggaagccttg cgcgtcgctt gcaaagggat gacggttatc
     1501 atggtcgagc acaatctgga cgtcgtatct ggcctggcgg atgtggtttg ctgcatggag
     1561 ggcgggaagt tcagcgatgt cggcagaccc gacgagttgg ccaatcgccc gtcgctgttc
     1621 agggagttac tcgccgctcg cgagcgcctg accagcactg tgggaatgga actgcacagc
     1681 gtcagcctac ccagaattgg ttctgggccg gcgttcgacc cctgggccga tcaacacgat
     1741 gcgaacagcg acgcgcccgc caacggcgaa gccatggttc ccgccacatc gtccgcgggc
     1801 gcggcatgag gttctccaca tgagcgatct cacatctctg ctggatcagc accttcatat
     1861 cccgccacgg tcggaatgcg agaataccct gcgtctgctg atacgcatgg gcctgatggt
     1921 catcggtgcg gcggaaggat cgctgttggt attgaacgaa gaaaccaacg aactggaatt
     1981 cgctttgacg gttggtgatc cgaaatcgga ggcgatgctg ctcggccagc gcgttcccgt
     2041 gggtctgggg atcaccggtc tcgcggctgc gacgtcgcgg gtccagatcg gcgcccctac
     2101 attcaaggac gttcgccagt cgtcgcgtgg tgatacgccg gccagcggtc cggaagccgt
     2161 gatggcggca cccgtcatgg ccggggagcg cctggtcgca gtcatgacag cggtcagctt
     2221 tgaaaaggcg aagcgcttca ccaaccagga tggcaaaatg ttcggcggct tcgcggtgat
     2281 cgcaggagct ctggtggggc agaatctgcg cctggcagag cgggaccgtc gtcaccctg
//
LOCUS       DATAVD010001810         2972 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1101358, whole genome shotgun sequence.
ACCESSION   DATAVD010001810 DATAVD010000000
VERSION     DATAVD010001810.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2972
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1101358"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..689
                     /locus_tag="VHX39_34570"
     CDS             <1..689
                     /locus_tag="VHX39_34570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011253700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3996323.1"
                     /translation="DVARAGTLLRARQTEGVMAAAACTGTFVLAESGLLDGRKATTSW
                     WLGPFFRARYPKVVLDDGRMVVRSDDVVTAGAALAHFDLALWLVRRISPALAAVTARY
                     LMIDPRSSQAAYAIPDHLTHADAVVERFERWARENLFNGFSLDDASRAIGASPRTLAR
                     RLRAVLGKSPLSYFQDLRVERAVHLLQMSGKSVERIAIEVGYSDAVTLRNLLRRRLGR
                     SASQLRRLEG"
     gene            838..1581
                     /locus_tag="VHX39_34575"
     CDS             838..1581
                     /locus_tag="VHX39_34575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996324.1"
                     /translation="MSLAVNVIRAIFASLVSAEPPSLWFEAVERGLSPTRPLQIRCCK
                     KAPYARVAELGAALHQRAVLLGATVVLDWFHIATRFEHALRAAAGVSNDTADAHLGKL
                     SRHSIERAKWCLWHGRWKRCLVKLANIYRWTEFQSIRDAAGIQTLQRHLRDLTDYLES
                     NQAALVNYGARRRRGEPISKAFVESAVNEIISRRMIKKQQMRWNRWTVQPFLDVRTAV
                     LNGTLEGAFRRHYPDFRPANRNIQVPAAA"
     gene            complement(1736..>2972)
                     /locus_tag="VHX39_34580"
     CDS             complement(1736..>2972)
                     /locus_tag="VHX39_34580"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF013113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEX3996325.1"
                     /translation="FIGVVGMQPLHMVAPASDDPRRVKEFADELVGYLADMMEKGLNP
                     RDIVKRDSIRNAVIVAMAIGGSTNVTLHAPEIARAAGYADFWKDIMTPEEFNHLSRDV
                     VPVLTDARPYGNYSMVDIDRVGGVQVIVRELLEAGLLNGDMMTCTGETLSAQVARLGA
                     KASDGKVIRTVEKPYKPTGGLRVLGGNLSPDFSAILKLAGVEGGLENNNFRGIARVFE
                     GEQGLLDALDRTPESFQNNDMIIVRYEGPSGAPGMPEMLDPTSRITTLCRERGIVVGL
                     MTDARFSGGSVGLVIGHVGPEAALGGPIAFIENGDEIVVDLNTSTLNCTALNDPATLA
                     KRKAVWESEVAANGGTHPKCGIADTRLLHRARQMAVPATRGGGMHPNREVWVRAPRAA
                     ERTRFVPVNKYRPEANKAF"
BASE COUNT          540 a          963 c          890 g          579 t
ORIGIN      
        1 gagacgtcgc cagggcgggg acgctgctgc gcgcccggca gaccgagggc gtaatggcag
       61 cagcagcctg cacgggcacc ttcgttctcg ccgaaagcgg attgcttgat ggccgaaagg
      121 cgacgacgag ttggtggttg ggaccatttt tcagggcgcg ttatccgaaa gtcgttctcg
      181 atgatgggcg catggtcgtt cgatccgatg acgtcgtcac ggcaggcgcg gcgcttgcgc
      241 attttgacct cgccctctgg ctcgtacgcc ggatcagccc ggcgctcgcc gccgtcacag
      301 cgcgttatct aatgatcgac ccgcgctcct cccaggcggc ctatgccata ccggatcacc
      361 tgacccacgc ggatgccgtg gtcgagcgct tcgagcgctg ggcccgcgag aacttgttca
      421 acggattttc cctggacgat gcgtcacgcg cgatcggcgc cagcccgcgc accttggcgc
      481 gacgactgcg cgccgtgcta ggcaagtcgc cgctgtccta ttttcaagat ttgcgagtcg
      541 aacgcgcagt gcatctgctg caaatgagcg gcaaaagcgt cgagcgaatc gcgatcgagg
      601 tcggctattc cgatgccgtc accttacgta acctgttgcg ccgccggctc gggcgcagcg
      661 catctcagtt gcgcaggctg gaaggctgac ccgctgtcgc gcagcatcta acgctgcaac
      721 agcatctcca ggaatgcggc cggtttcgcc gtacacccaa tttgcaacac agcacttaac
      781 cctgcaacag aatgatggct ttatggcatc ttatatgcaa ccaagtggtg caaaaaattg
      841 agcctcgctg tcaacgtgat cagagccatt tttgctagtt tggtttcagc tgagccgcca
      901 agtttatggt ttgaagcagt cgaacgaggt ctcagcccaa cgaggccgtt gcaaataagg
      961 tgctgtaaaa aagcacctta tgcgagagtc gctgaattag gtgctgcgct acaccagcgc
     1021 gccgtactgc ttggcgccac cgtggtgctg gactggttcc atatcgccac gcgcttcgag
     1081 cacgccctgc gggccgccgc cggtgtcagc aacgataccg ccgatgctca cctgggcaaa
     1141 ctgtcgcgtc acagcatcga acgcgcgaaa tggtgcctct ggcatggccg ctggaaacgc
     1201 tgcctcgtga agctcgccaa catctaccgt tggactgagt tccaaagcat tcgtgatgcc
     1261 gcgggcatcc aaactctaca gcggcacctg agggatctga ctgattacct cgaatccaac
     1321 caggcggcgc tggtcaatta cggtgcccgc cggcggcgcg gtgaacccat ttcgaaggcg
     1381 ttcgttgaga gcgcggtcaa cgaaatcata tcgcgtcgga tgatcaagaa gcagcagatg
     1441 cgctggaaca ggtggacggt acagccattc cttgacgtcc gcacagccgt cctgaacggc
     1501 acgctcgagg gcgcgttcag acgacactat cccgactttc gtcctgccaa ccgcaacatc
     1561 caagtcccag ccgcagcatg aatccccacg actttgcatg ctctcgagat cgtgctggca
     1621 ggcctgcgcg ccggcacgat ccgcttctcc tggccccacg cctaacctgc cggccgtggt
     1681 gatagaccag ttcggcaccg tcatgatggc ggtgccgaca ggtctatcta tccgatcaga
     1741 acgccttgtt cgcctccggc cggtacttgt ttactggcac gaagcgcgtc cgttcggctg
     1801 cccgcggcgc gcggacccag acctctcggt tcgggtgcat gccgccgccc cgcgtcgccg
     1861 gaaccgccat ctgccgagcg cgatgcaaca ggcgagtgtc ggcgatgccg catttcggat
     1921 gtgtgccgcc attggcggcg acctcactct cccagaccgc cttgcgcttt gccagtgtgg
     1981 cgggatcatt cagcgcggtg cagttcagtg tgctcgtgtt tagatcgacc acgatctcat
     2041 cgccgttctc gatgaacgcg atcggtccgc ccagcgcggc ttccggtccg acatgcccga
     2101 tgactaagcc aaccgagccg ccggagaagc gcgcatccgt catcaacccg acgacgatgc
     2161 cgcgttcgcg acacaacgtc gtaatccgcg acgtcggatc cagcatctcc ggcatgcccg
     2221 gtgctccgct cggcccctcg taccggacga tgatcatgtc gttgttctgg aagctttctg
     2281 gcgttcggtc gagcgcgtcg agcaggccct gctcgccctc gaacacccgc gcgatgccgc
     2341 ggaagttatt attctcaagg ccgccttcga cgcccgctag tttcaggatc gccgagaaat
     2401 ccggcgacag gttgccaccc aatacgcgca ggccgccggt cggcttatag ggcttctcga
     2461 ccgtgcggat caccttgccg tcggaggctt tggcgccgag gcgggcgacc tgggcgctga
     2521 gcgtctctcc cgtgcaggtc atcatgtcgc cattgagcag acccgcttcc agcagttcgc
     2581 gcacgatcac ctgcacgccg ccgacccggt cgatatcgac catcgagtag ttgccatagg
     2641 gtcgggcgtc cgtcagcacc ggcacgacat cgcgcgagag gtgattgaac tcctccggcg
     2701 tcatgatgtc cttccagaag tcggcatagc cggcggcgcg cgcgatttcg ggtgcgtgca
     2761 gcgtgacatt ggtggaaccg ccgatcgcca tcgccacgat caccgcgttg cggatcgagt
     2821 cacgcttgac gatgtcgcgc gggttcaggc ccttttccat catgtcagcg aggtagccga
     2881 ccaactcgtc ggcgaattct ttgacccggc gcggatcgtc ggacgccggc gcgaccatgt
     2941 gcagcggctg catgccgacg acgccgatga ac
//
LOCUS       DATAVD010001811         1925 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3331214, whole genome shotgun sequence.
ACCESSION   DATAVD010001811 DATAVD010000000
VERSION     DATAVD010001811.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1925
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3331214"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(79..1293)
                     /locus_tag="VHX39_34585"
     CDS             complement(79..1293)
                     /locus_tag="VHX39_34585"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEX3996326.1"
                     /translation="MTEHAFRASGYPWRLYCGPQTIEQSLREAVDRAAAQRAFVICSP
                     SVNRRTDTVRRIAAALGDRYAGVYDGIEKDSTYTSVCAARDAATEAAADLLIAVGGGS
                     VIVAVRAVAIFLAEAGNPFQIMTQYPEGKSAYSPRLLAPKLPIINIPTTPNSAMNRAG
                     TGLKNPDLDHRMEYFDPKTRPHSIFLDDEALLSAPQALLRSTATTVFAGLVGSMAQLQ
                     MNPLAEGDRNHAFRLAHRAYPRLVDEPDNPALRIDLCIAAFLQNRAEDDGSRRFRGGI
                     FSGNYAVSTALHVRYPHVGQGESTSVVHVPKIRLSEQPEPRAARQVAEALGVWHGNMD
                     ARQAALAVADTLEALYTRLEMPTRLRQLRIARDDLAAIANETVKNFNANAGVRSAQEQ
                     IAEALQLLEAAY"
     gene            complement(1346..>1925)
                     /locus_tag="VHX39_34590"
     CDS             complement(1346..>1925)
                     /locus_tag="VHX39_34590"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEX3996327.1"
                     /translation="MRQTGLTWEAYLDWEARQPIRYELVDGQVYAMGGGTAEHDTIGN
                     NLRGELRTQMRGQPSRPHGPDLKVRAGKDGRYPDALIDCGPRVPGALHAQEPVVVFEV
                     LSKSTGWIDQTLKLRDYDATPTIRTYVLISQDERRAMVYTRDESGRLGIQNAVLLEGA
                     EASIEIPDLGLALPFSVLYEGIEFGSDAASAP"
BASE COUNT          336 a          593 c          625 g          371 t
ORIGIN      
        1 cctccgtcgt tgttgaatgg cgcggaatgc aactggcagc ttaagccagt tgcgcgagaa
       61 ccaaaagggg tggcccattt agtaggcggc ctcgagcagc tgcagcgcct ccgcgatttg
      121 ctcctgcgct gaacgcacac cggcgttggc attgaagttc tttaccgttt cgttggcgat
      181 cgccgccagg tcatcgcgcg caatccgcag ctgacgtagc cgtgtcggca tctcaagccg
      241 cgtatagagc gcctcgagcg tgtcggccac ggcgagtgcc gcctgtctgg catccatgtt
      301 gccgtgccag acgccaagcg cttccgcgac ctggcgggcg gcacgcggct cgggttgttc
      361 ggaaagccgg attttcggca catgaaccac cgacgtcgat tcaccctgcc cgacatgcgg
      421 gtagcgcaca tgcaacgctg tggaaaccgc ataattgccg gagaagatgc cgccacggaa
      481 gcggcgggac ccatcgtcct ccgcgcggtt ttgcaggaac gcggcaatgc acagatcgat
      541 ccgcaacgcc ggattgtccg gctcgtcgac caggcgcgga taagcgcggt gcgccagccg
      601 gaacgcatgg ttgcggtcgc cctcggccag cgggttcatt tgcaattgcg ccatcgatcc
      661 tacgaggccg gcgaacactg tggtcgcggt ggaccggagc aacgcctgcg gcgcactgag
      721 caacgcctcg tcgtcgagga agatggagtg cggccgggtc ttcggatcga aatactccat
      781 gcgatgatcg aggtcggggt ttttcagccc agtaccggcg cggttcatgg cgctgttcgg
      841 tgtcgtcgga atgttgatga tcggcagttt cggtgccagc agccgagggc tgtaggccga
      901 cttgccctca gggtattgcg tcatgatctg gaacggattg cctgcctcgg ccaggaagat
      961 cgccaccgcg cgcacagcga cgatgacgct gccgccgccc acagcgatca ggaggtcggc
     1021 tgctgcctcg gtcgctgcgt ccctggcggc gcagaccgag gtgtaggtcg aatccttttc
     1081 gatcccgtca taaacgccgg cgtaacggtc acccagtgcg gcggcgatgc gccggaccgt
     1141 gtcggtgcgc cggttgacgg acggcgaaca gatgacgaaa gcccgttgcg cagcggcccg
     1201 gtccaccgct tcgcgcaggc tttgctcgat ggtttgcggg ccgcaataga ggcgccacgg
     1261 gtagcctgag gcacggaatg catgctcggt catcgcttcg ccgatcggtt agggttttca
     1321 gcgtgtcgct cctgaccatg ttcgatcaag gggctgacgc cgcatcggaa ccgaattcga
     1381 tcccctcgta gaggacggaa aatggcaaag ccaggccaag gtccggaatt tcgatcgaag
     1441 cttcggcgcc ttcgagaagg acggcattct gaatgccaag ccgcccggac tcgtcccgcg
     1501 tgtaaaccat ggcccgccgc tcgtcctggc tgatgagcac gtaggtgcga atggtcggtg
     1561 ttgcgtcgta atcgcgcagc ttcagtgtct ggtcgatcca gccggtgctt ttggacaaga
     1621 cctcgaaaac caccaccggc tcttgcgcgt gcagtgcgcc cggcacgcgt ggaccgcaat
     1681 cgatgagcgc atcgggataa cggccatcct tgcccgctcg cactttgaga tccgggccgt
     1741 gtggtcggct tggttggcct cgcatttgcg ttcgaagctc gccccgcaaa ttgttgccga
     1801 tggtatcgtg ctcggcggta ccgccgccca tggcgtagac ctgaccgtcg acgagctcgt
     1861 accggattgg ctgacgagcc tcccaatcca ggtaagcttc ccaggtcaag ccggtttgcc
     1921 gcatt
//
LOCUS       DATAVD010001812         2096 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2964578, whole genome shotgun sequence.
ACCESSION   DATAVD010001812 DATAVD010000000
VERSION     DATAVD010001812.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2096)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2096)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2096
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2964578"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VHX39_34595"
     CDS             <1..188
                     /locus_tag="VHX39_34595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996328.1"
                     /translation="LSILEDQMAALFVAAAAGMLWQLRQEVFVRNWSDSYHGTWMRRA
                     RPSMTRGFAATTGEAPL"
     gene            185..1207
                     /locus_tag="VHX39_34600"
     CDS             185..1207
                     /locus_tag="VHX39_34600"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX3996329.1"
                     /translation="MNESDDNNFTLLRLMLALMVVLGHAKLLSGTAWPNFPFNLADAA
                     VDAFFVVSGFLITGSYLRCHGLLSFYVRRVFRLYPMYLCIVLAQTVAMLLLLPAGPFS
                     EPAATVRYVAANAMLANFVQYDIGGVLDGLRNPGINPSLWTLKIEIGFYLIVPAIVVA
                     TQRWGPKVLAAIFVGSVAYAVILRYRGDVRLAQQLPGQLQFFVVGVALCLYGQTLRVN
                     LWLTGAIAVAFFTTWSLLHPIAEGVRPLVVAAFVHSVALSTPPLRLRTDLSYSVYLIH
                     GPLLQILILLGVFHDTPLWIGGIVVLVLALAWVTERLIERPGTKFGHVLSRRLARRRP
                     VVVQSA"
     gene            1217..>2096
                     /locus_tag="VHX39_34605"
     CDS             1217..>2096
                     /locus_tag="VHX39_34605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996330.1"
                     /translation="MPIESVVVLNDFCHAQGGASRVAISEAIALQQIGVQVWFLGAVG
                     PVCQELLDSDVRVICLEQAALADVKTGPRAALAAMWNQTAFRRLRSLLATLDRQRTIV
                     HLHGYTKALSTSPVIAAKHVGFTTICTLHDFFAACPNGAFFNYQTQTPCTLRGLSSAC
                     LFTACDKRHAVHKAYRVVRGAVQRHIARFPSGVEQYIALSRRSAELLRPYLPANAQLH
                     PLANIIDVIQQPKVDPGANRNLTVVGRLDEEKGVRLAALAAAEAGMPIVFVGDGPYRG
                     VVEAAGARVTGWLPAAE"
BASE COUNT          339 a          631 c          660 g          466 t
ORIGIN      
        1 ccctgtcgat tctcgaggac cagatggccg cactgttcgt tgcagcagcg gccggaatgt
       61 tatggcaact ccgccaggag gtgttcgtca gaaattggag cgattcttac catggcacct
      121 ggatgcggcg ggcgcggccg tcgatgactc ggggatttgc ggcgacaacc ggcgaggcgc
      181 cgttatgaac gaaagcgatg acaacaactt tactttgctg cgcctgatgc tggcgctgat
      241 ggtagtgctt ggccatgcca aactgctgtc gggcacggcc tggccgaact ttccgttcaa
      301 cctggccgat gccgcggtgg acgccttttt tgttgtcagc gggttcctga tcactggcag
      361 ttacctgcgc tgccacggct tgttgtcgtt ctatgtgcgg cgcgtgtttc gcctgtatcc
      421 gatgtatctg tgcatcgtgc tggcgcaaac ggttgccatg cttctgctgc tgccggccgg
      481 accgttcagc gaacccgctg cgacggtgcg ttacgtcgcg gccaatgcaa tgctggcgaa
      541 tttcgtgcag tacgacattg gtggcgtgct cgacggattg cgcaatccgg gcatcaatcc
      601 cagcctgtgg actctgaaaa tcgaaatcgg tttttatctc attgtgccgg cgatcgtcgt
      661 ggcgacgcag cggtggggcc ccaaggttct ggcggcaatt tttgtcggct cggtggcgta
      721 cgcggtcatc ctgcggtatc ggggcgacgt tcggcttgcg cagcagctgc cgggtcagtt
      781 gcagttcttc gtggtcggtg tggcgctgtg tttgtatggc cagaccctgc gcgtgaatct
      841 ttggctgaca ggcgcaattg ccgtcgcgtt tttcaccacg tggagtctcc tgcaccccat
      901 tgccgagggt gtgcgaccgt tggtcgtcgc tgccttcgtg cacagtgttg ctttgagtac
      961 gccaccgctg cgcctgcgca ccgatctgtc ctacagcgtc tatttgatcc atggtccgtt
     1021 gctgcaaatt ctgatcctgc tgggtgtgtt tcacgacacg ccgttatgga tcggcggcat
     1081 cgtcgtcctg gttctggctc tcgcgtgggt caccgagcgg ctgatcgaac gtcccggcac
     1141 aaagttcggc catgtgctct cccggaggct ggccaggcgc cgccccgtcg tcgtgcagag
     1201 cgcctgaacc atggtcatgc caattgaatc ggtcgtcgta ctcaacgatt tttgccacgc
     1261 gcaaggtggc gccagccggg tcgcgatcag cgaggccatt gcgctgcagc agatcggcgt
     1321 tcaggtatgg tttctaggcg cggtcggtcc ggtctgtcag gaattactgg acagcgacgt
     1381 gcgcgtgatc tgcctggagc aagcggcgct ggcggatgtc aaaaccggcc cgcgtgcagc
     1441 gctggccgcg atgtggaatc aaaccgcatt tcgcaggctg cgcagcctgt tggcgacgct
     1501 cgaccgccaa cgcaccatcg tgcatttgca tggctacacc aaagcgctca gcaccagtcc
     1561 ggtcattgcg gcaaagcatg tcggattcac gacgatctgc acattgcacg acttcttcgc
     1621 ggcctgtccg aacggcgctt tcttcaacta tcaaacacag acgccttgca cactgcgagg
     1681 cctgtcctcc gcctgtttgt tcaccgcctg cgacaaaagg cacgccgtac acaaggcgta
     1741 tcgggtcgtc cgcggggctg tgcaacgcca catcgcgcgc tttccatccg gggtcgagca
     1801 gtacatcgca ttgtcgcgcc gctccgccga actgttacgt ccgtatctgc cagccaatgc
     1861 gcaactgcat ccgctcgcca acatcatcga cgtgatacag caaccgaagg tcgatcccgg
     1921 cgccaatcgc aacctgacgg tggtcgggcg gctggacgag gaaaaaggcg tgcggctggc
     1981 tgcactcgcc gctgccgagg cgggaatgcc gatcgtcttc gtgggcgacg ggccctatcg
     2041 aggcgtcgtc gaagcggcgg gcgctcgcgt caccggttgg ctccctgcgg cggagg
//
LOCUS       DATAVD010001813         1832 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_175432, whole genome shotgun sequence.
ACCESSION   DATAVD010001813 DATAVD010000000
VERSION     DATAVD010001813.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175432"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            246..1315
                     /locus_tag="VHX39_34610"
     CDS             join(246..735,735..1315)
                     /locus_tag="VHX39_34610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611116.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEX3996331.1"
                     /translation="MGQPVAITRTCLSVSELRALAGKTDDGGVVRRLLAIALVLEGRS
                     REEAALLNGMTRQTLRDWVHRYNTEGVEGLRSRVGPGRPPVLTSARMEELRELVIKGP
                     DPKRHTVIRWRCADLCAEIAERWSVRVCEQTMGTWLRRLKMTRLQPRPYHPNKDHEAE
                     VAFKKNFSSLVKAALPASAAGKPLEIWFQDEARVGQQGSLEYIWAPVGSRPLAVRDNR
                     HDSVYLFGALCPARATGAAIIMPAANSEAMSEHLKEVATQVAPGAHAVMLCDGAGWHQ
                     RGDRLTVPDIITLLPIPPYSPELNPMENVWDYLRGNKLSHTIWDTYDAIVGACADAWR
                     FLIGDPDRIRSIATRSWASVNV"
     gene            complement(1353..>1832)
                     /locus_tag="VHX39_34615"
     CDS             complement(1353..>1832)
                     /locus_tag="VHX39_34615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEX3996332.1"
                     /translation="LGSEIDRVEARLIETEAKLMAQHKANADSRRLSAIPGVGPKSAL
                     NFTLRVDATQFKSGRHFAAWLGLVPRECSTGGKQRMGGISRAGNERLRQLLVLGATAV
                     IQHAKPGRPGVSAWLLKLLERKPRKLAAVALANKMARILWAMLTSGQTYRPAVPVAA"
BASE COUNT          339 a          558 c          590 g          345 t
ORIGIN      
        1 cgtcgtggcg agggcggcat aggggaagaa agaaaagcta ggggctctgc ccctggaccc
       61 cgctagcatt acagttgcct tttggcttga gttgtgaatc cataggccgc catgattcgg
      121 gaggtcatgg atggcgggag catcgattga taccaggccg ggtaacggct gactctcgag
      181 gggcttcccg aatcggctgc ggattgattc tctgcgagta gcgcagcttg caagggagtg
      241 cggtgatggg ccagccagtc gcgatcaccc ggacgtgtct gtcggtttcg gagttacgtg
      301 ccttggcggg gaagaccgac gatggtgggg tggtacgccg ccttctggcg attgccctgg
      361 tactggaagg ccgttcccgc gaggaggcag cgttattgaa cgggatgacc cgccagacgc
      421 tgcgcgattg ggttcatcgc tacaatactg aaggcgtcga agggcttcgc tcgcgggtcg
      481 gccctggacg cccgccggtt ctgaccagcg cgcgaatgga ggagctgagg gaactggtga
      541 tcaaggggcc ggaccccaaa cggcacacgg tgatacgctg gcgatgcgcc gatctatgcg
      601 cggagatcgc cgaacggtgg tcggtgaggg tgtgcgaaca aaccatgggc acgtggctgc
      661 gccggctgaa aatgacccgg ttgcagcccc gcccgtatca cccgaacaag gaccacgagg
      721 ccgaagtggc ttttaaaaaa acttcagcag cctggtgaag gcggccttgc ctgcctcggc
      781 agcaggcaag ccgcttgaaa tctggttcca ggacgaagcc agagtagggc agcagggctc
      841 gctggaatac atctgggcgc cggtcggttc acgtccgctg gcggtgcggg acaaccgcca
      901 tgactcggtt tatttgttcg gcgcattgtg tcccgctcgc gcgaccggcg ccgcgatcat
      961 catgccggca gccaacagcg aagccatgag cgaacacctg aaggaggtcg cgacacaggt
     1021 cgcgcccggc gctcatgccg tcatgctgtg cgatggcgcc ggttggcacc agcgcggcga
     1081 tcggctcacc gtccccgaca tcatcacttt gttgcccata ccgccctatt caccggagtt
     1141 gaacccgatg gagaatgtct gggactattt gcgcggcaac aaactcagtc acacgatatg
     1201 ggatacctac gatgccatcg tcggagcatg tgccgacgca tggcgcttcc tcatcggcga
     1261 tcccgaccgc atcaggtcga tcgctactcg tagctgggca tcggtcaatg tttaggcggc
     1321 ctggtattac accagcggca tgacgagcgg gttcaggctg cgaccggcac tgccggccga
     1381 tatgtctgtc cactcgtcag catggcccac agaatgcggg ccatcttgtt ggccagagcc
     1441 accgccgcga gcttgcgcgg cttacgctcc agcaatttca gcagccatgc cgacacaccc
     1501 gggcgccccg gcttggcatg ttggatcacg gcggttgcgc ccagcaccag caactgtcgt
     1561 aaccgctcat tcccggcccg gctgatgccg cccatccgtt gtttgccgcc ggtcgaacat
     1621 tcgcgcggca ccagccccag ccaggcggca aaatggcggc ccgatttgaa ctgcgtggca
     1681 tcgacccgca gcgtgaaatt cagcgcgctc tttggtccta ccccgggaat tgctgacaag
     1741 cggcggctgt cggcattggc tttatgctgt gccatcagct tcgcctcggt ctcgataagc
     1801 cgcgcctcca cccgatcgat ctcgctgccc ag
//
LOCUS       DATAVD010001814         7749 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3145994, whole genome shotgun sequence.
ACCESSION   DATAVD010001814 DATAVD010000000
VERSION     DATAVD010001814.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7749
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3145994"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..699)
                     /locus_tag="VHX39_34620"
     CDS             complement(<1..699)
                     /locus_tag="VHX39_34620"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEX3996333.1"
                     /translation="MLKNARFGGVNAAVLTAMNADLSIDLDRMAAHCRWLLANGCNGL
                     AVLGTTGEANSLGIQERIALLEGLIARGIPAAKMLPGTGTTAITDTVLLTKTAESLGC
                     RGALLLPPFYYKNPSDDGLLAYFNEVAQRVGGAISLYLYNFPQQSAIPFSVDFIARLL
                     KANPGKYVGIKDSSGNYENGLAYVENFAKDGFEVYAGDDTLLKPLLEKGSAGCITAAS
                     NVNCAIGAQVYAGWN"
     gene            complement(693..1178)
                     /locus_tag="VHX39_34625"
     CDS             complement(693..1178)
                     /locus_tag="VHX39_34625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HEX3996334.1"
                     /translation="MPAAAPFWKTKTLEEMTHDEWESLCDGCGRCCLHKLRDDVTEAL
                     SFTNVACRLLDSHSCQCSDYSRRQRRVPDCVTLTPAMVREIDWLPPSCAYRRLAEGHE
                     LSWWHPLVSGDKNTVHEAGISVRDRVISERLAGPMEHHLADWPGRLPRARRPRKESDE
                     C"
     gene            complement(1342..2415)
                     /locus_tag="VHX39_34630"
     CDS             complement(1342..2415)
                     /locus_tag="VHX39_34630"
                     /inference="COORDINATES: protein motif:HMM:NF016269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding SYLF domain-containing protein"
                     /protein_id="HEX3996335.1"
                     /translation="MTLFPRTASVQHRRSRLGFAAVGLTALALAACQQGAGGEQTLVD
                     RAALALQEMMTQTVSQDPRTMLQRAKAVLICPRVFKAGFFFGGEGGSCVMLSRSGNGT
                     WSYPAFYDIGSGSFGFQFGVQDSQLVLMIMTNRGLNAVMDSQVRLGANLSVAVATIGG
                     GVQGATTAAVGPDIIAFAAARGLFGGVSLEGGVMSARSDENQSYYGQPLAGRQIVLQM
                     QGQNPGADPLRQVLTRYGSADPAYPGGAYPPPGGAYQPPYQGQPPYQGPPAQQPYPPA
                     YQPPPGQPSSQAPSPGYQAPPSQPAGPSYSPPPTPAYSPPAPQPSPSAPPTGYQPPPG
                     QYTYPPPSGNGPIQQQNLPPPGR"
     gene            2745..3728
                     /locus_tag="VHX39_34635"
     CDS             2745..3728
                     /locus_tag="VHX39_34635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996336.1"
                     /translation="MILPGGVTLAATVCNTTPNMAPYSFWIAKGEREYLVDLTDLLHQ
                     EQDVGLTGLTYHKGKIYLAVQSGVNPRILVFDRHLECVETITHPDFSDLHSLSIANGC
                     LLVVSTGNQSVIAVDLKDHGTTTLFRTDHKIHPNSVIQDATGLLVCCQSPRHLFSTAS
                     QGGVLDITNQRIIVDGLGYPHSLQPSGNKFIVLDSSGERVIRFDRSGVVQQQAVSGFL
                     RGAAAGAGCLFVAGSVGRFISRKNPQPVTSHATWEALGERVCIHELDEKTLALRRTHF
                     PLAAGFEIYELLVLEGNDTVESPSGRLLIPTQYALSRAFYEAAKSASADRQ"
     gene            complement(3762..4754)
                     /locus_tag="VHX39_34640"
     CDS             complement(3762..4754)
                     /locus_tag="VHX39_34640"
                     /inference="COORDINATES: protein motif:HMM:NF027586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4915 domain-containing protein"
                     /protein_id="HEX3996337.1"
                     /translation="MNLPQGVILLATICNTVGVASAFALWLSDGEQQYVVDLSDHMQG
                     SGGLTGIAFHDGRIYVAVQSARSRILVLDLGLRVVDEIQNDNFNDLHSLHIAGGALFI
                     VSTRNGRLLKHDLATGNTSVIAEFDPAAWVSGVHCWPDDLWLCCHEVWRLDPNAQGGG
                     VYSVGRGRKVLDGLLRPHSLIRYRDGSVVLDSGNARVVYFDYDGINRVCQLRGFPRGV
                     AVAGEATLLVASGPHRTISRKNPVSAAGKGFRDVAYERLNIFEVTHGELIRTFLPELP
                     GFEIYDMLVLSANAALRPADDRVIRLEQGMFARLYYVALVDAMLRLSGAPAKPQ"
     gene            complement(5084..5809)
                     /locus_tag="VHX39_34645"
     CDS             complement(5084..5809)
                     /locus_tag="VHX39_34645"
                     /inference="COORDINATES: protein motif:HMM:NF019225.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-CTERM sorting domain-containing protein"
                     /protein_id="HEX3996338.1"
                     /translation="MKIVGVASGLMLVLAAGSARAVPVYDTITGQTNVAGLVANTTSG
                     HGPLGDSFSASSTETITSVTLAMELKSAAGAGSELVYLVPNGSEGNPSLPSYTPGVPV
                     TLTNATLLGTIFDNNPLLSTQSYTNITLTPSLTIGAGNYWIELVDGASANNGNGDSTI
                     SIDRWGYDADINGLGVPTSGNIVSTASAPPGTLVGDGTATPALTGEVFELQIQTPEPS
                     SLAVLGAGLLCLGIGRRARKLQR"
     gene            complement(6161..7504)
                     /locus_tag="VHX39_34650"
     CDS             complement(6161..7504)
                     /locus_tag="VHX39_34650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996339.1"
                     /translation="MTKVSERLGLTLVNYFGLVDHIAPDPDVVLLPHSLLSQSALAAL
                     RDRPYRAIRMIRDPRDIWVSGYLYHRHCAEKWCTNSDLDPTPPIGWPQVDHSLAHRPE
                     DWKRSHLERLNGRSYRQNLLDRDMNEGLKFEREGYTSCTLEAMREWTSYGLVAMDIRL
                     EDVMADFDSEMLRIFDHFGFTAEQSQAALDVARSEDIRRMDEAALALRPQVHSRVLSK
                     WSMMLSAAQVAEFEACHGDLIGELGYDLAATFPDILTPKGTNNWITRADERVGADVPL
                     AADVPLAADMKFNVEVDEARLVWPQLTGSHASTGTAAPGAAVWLSADGVTIRPMLSDQ
                     GTYRFVVPPGVECLRLESRRVVPADRRAPYLGGARSLGVRVSSIVIRSHTSEVVIPAD
                     DPRLLTGWYGVEQSGRRLSRWTDGSAELPWAAMTCPTIVTIWCQLPAVCLERDAT"
BASE COUNT         1625 a         2374 c         2271 g         1479 t
ORIGIN      
        1 attccagcct gcataaacct gggcgccgat tgcgcagttc acgttcgacg cagcggtgat
       61 gcaaccggcc gagccttttt ccagcagcgg cttcagcagc gtatcgtcgc cggcgtaaac
      121 ctcgaatccg tccttcgcga aattctcgac atacgctaaa ccattttcat agtttccgct
      181 gctgtccttg atcccgacgt atttgccggg attggccttg agcagacgcg caatgaaatc
      241 gacactgaac gggatggccg attgttgcgg aaagttatat aaatacaggc tgatcgcgcc
      301 gccgacacgt tgcgcgacct cattgaaata ggccagcaac ccatcgtcgg acggattttt
      361 gtaatagaac ggcggcagca gcagcgcgcc gcggcagccc aatgattctg ctgtcttcgt
      421 cagcaggacg gtgtcggtga tcgcggtcgt tccggtgccg ggcagcatct ttgcggccgg
      481 aatgccgcgc gcgatcagcc cctccagcaa cgcaatgcgt tcctgaatgc caagcgaatt
      541 cgcttccccg gtggtgccca gtacggcgag cccgttgcaa ccattggcga gcagccaccg
      601 gcaatgcgcc gccatgcggt cgagatcgat cgacaggtcg gcattcatgg ctgtcaacac
      661 ggcggcattg accccaccga aacgggcatt cttcagcatt cgtcgctctc cttcctcggt
      721 cgtcttgctc tggggagtcg cccaggccag tcggccaaat ggtgttccat gggaccggcg
      781 aggcgttcgg aaatcactcg atcgcggacc gaaatgccgg cctcatgcac ggtattcttg
      841 tcgccggaca ccaagggatg ccaccaggac agttcatggc cttcggcaag gcggcgatag
      901 gcacaagagg gtggcaacca gtcgatttct cgcaccatag cgggtgtcag cgtgacgcaa
      961 tccgggacgc ggcgttgccg cctggagtaa tcggagcatt ggcacgagtg cgagtccaat
     1021 aaccggcagg caacattggt gaacgacaga gcctcggtca cgtcgtcacg cagtttatgc
     1081 aggcagcagc ggccgcagcc gtcacaaagc gactcccact cgtcgtgggt catctcttcg
     1141 agggttttcg tcttccagaa tggtgcggcg gcgggcatcg cagcatcacc ctacagatcg
     1201 ccggaccggc tggcgagtac tgttgcgatc cgatggtgcg atccgatggt gcgatccgat
     1261 cggccctgac aggatctcga cagcgcttgt agccggctgc cgattccggg cccagcgtcc
     1321 cactccactc tatccgagaa attaccggcc aggaggcggc aggttttgct gttggatcgg
     1381 tccgttcccg gagggcggcg gataggtgta ctggccgggc ggcggctggt agccggtcgg
     1441 aggcgccgaa ggactcggct gcggagccgg cggcgagtag gccggcgttg gtggtggcga
     1501 atacgatggt ccggccggtt ggctcggggg cgcctgataa ccaggtgaag gcgcctggga
     1561 tgacggctgg ccaggcggcg gttggtatgc gggcggatag ggctgttggg ctggaggtcc
     1621 ctgataaggc ggctggccct gataaggcgg ttgataagcg cctcctggcg gcgggtaggc
     1681 accgcccgga tacgctggat ccgcgctgcc atatcgggtc aacacctggc gcaacgggtc
     1741 ggcccctggg ttctgtccct gcatttgcaa gacaatctgg cgacccgcca gcggctggcc
     1801 ataataagac tggttctcgt cgctccgggc ggacatcaca ccgccctcga gcgacacgcc
     1861 gccgaacagg ccgcgggccg ctgcaaaggc gatgatatcc ggcccgactg ctgccgtcgt
     1921 cgcgccttgc acgcccccac cgattgtcgc aacggccacc gacaggttgg cgccaagccg
     1981 tacctggctg tccatcaccg cattcagtcc acggttggtc atgatcatca aaaccagctg
     2041 gctgtcctgc acgccgaact ggaagccgaa actgccgctg ccgatatcgt agaacgcggg
     2101 atacgaccat gtgccattgc cggagcgcga caacatgacg caactcccgc cctcgccgcc
     2161 gaagaagaac ccggccttga acacccgcgg acagatcaac actgccttgg cccgctgcag
     2221 catggtcctc gggtcctgtg agacggtctg cgtcatcatc tcctgcagcg ccagtgccgc
     2281 gcggtcgacc agcgtctgct ccccgccggc accttgctgg caagcggcga gcgccagtgc
     2341 cgtcagcccg acggcggcaa aaccgagacg cgagcgccgg tgctggacgg aggcggtgcg
     2401 cggaaacaaa gtcatggcga cattctcccc tgttcgccga agctgggacg gcataacccc
     2461 gtgcgccgat tcccaagcca gggaataacc acccggtggc ggcattgtgg tcacggcacg
     2521 gccggctgga gtccgggcgc gccaatttgg cgcgatctca gggagggacc aaaggggtgg
     2581 attgcgcacc gggccatccc gctgcggctg ccacgatcac gtcccaggtg gccggatgga
     2641 ggacatcgac acagcccggg agatacaact cacggttgtt tttccttgag cggccggtac
     2701 gctcatggca aatcaacgcc aggtctttcg acggagatgg gcgcgtgatt ctaccaggcg
     2761 gagtgactct ggctgccacc gtgtgcaaca cgactcccaa catggcgccc tattcatttt
     2821 ggatcgccaa aggcgaacgc gagtatttgg tcgacctgac cgatttgttg catcaggaac
     2881 aagatgtcgg actgaccggc ctgacttatc acaaaggcaa aatctatctt gccgtccaga
     2941 gcggggtgaa cccccgcatt ctggtgttcg accgccattt ggagtgcgtt gaaaccatta
     3001 cgcatccgga ttttagcgac ctgcattcgc tgagtatcgc caatggctgc ctgcttgtcg
     3061 tgtccaccgg caatcagtcg gtgatcgcgg tcgacctgaa agatcatggc acgacgaccc
     3121 tgttccggac cgaccataag atccatccca attcggtcat acaggatgcg accgggctgc
     3181 tcgtctgctg tcaatcgccg aggcatctgt tcagcacggc atcgcagggg ggcgtgctcg
     3241 atatcaccaa tcaacgcatt attgtggacg ggcttggtta tccccattcg ctgcaaccca
     3301 gcggcaataa gttcattgtg ctcgacagca gcggtgagcg tgtcattcgc tttgaccgca
     3361 gcggcgtggt tcagcagcaa gcggtatcgg gttttttgcg cggtgctgcg gcgggcgcgg
     3421 gatgtctgtt tgtcgccggt agcgtcggtc gcttcatctc acgcaagaat ccgcaaccgg
     3481 tgacctcgca tgccacatgg gaggctttgg gcgaacgagt ttgcattcac gaactcgacg
     3541 agaaaacgct ggcgttgcgc agaactcatt tcccgctggc cgcgggcttc gagatttatg
     3601 agcttttggt gctggagggc aacgacacag tcgagtctcc ctccggccgt ttgctgatac
     3661 ctacgcaata tgcgctgtcg agagcgttct acgaagcagc gaaaagtgcc tccgcggatc
     3721 gccaatagcg gcgccaactc tgccacggac cggaaattcg gttattgcgg tttggctggc
     3781 gcgccactca gacgcagcat cgcatcgacc agagcgacat agtaaagccg cgcaaacata
     3841 ccttgctcaa gcctgataac ccggtcgtca gccggcctga gtgcggcgtt cgccgacagc
     3901 acaagcatgt cgtaaatctc gaacccaggc agttccggca gaaaagtccg gatcagttcg
     3961 ccatgcgtca cctcaaatat attgagacgt tcgtaagcga catcccggaa gcctttcccg
     4021 gccgcactga ccgggttttt gcgggagatt gtgcgatgcg gcccactcgc aaccagcaat
     4081 gttgcttctc cggcaacggc aacgccgcgt gggaagcccc gcaattggca gacccggttg
     4141 atcccgtcgt agtcaaaata cacgacccgc gcattgccgc tgtccagaac cacggatcca
     4201 tcgcgatacc tgatcaagga atgcggcctg agcaaaccat ccaacacctt ccggccccgc
     4261 ccgacgctgt acaccccgcc gccttgtgcg ttcggatcga gccgccagac ctcatggcag
     4321 caaagccaga ggtcgtccgg ccagcaatgt accccggaaa cccacgctgc cggatcaaac
     4381 tcggcaatga ccgaagtgtt gcccgtcgcc agatcatgct tcagcagtcg accgttcctt
     4441 gtcgaaacga tgaacagggc cccgccggca atgtgcagtg agtgcaggtc attgaaatta
     4501 tcattctgga tttcgtcgac gacgcgcaat ccaaggtcga gtacgaggat ccgtgaccgc
     4561 gctgactgta cagcgacata aatccggcca tcatggaatg cgatgccggt cagtccgccg
     4621 gatccctgca tgtgatccga gagatcgacg acgtattgtt gctctccgtc agaaagccag
     4681 agagcgaagg cgctggccac accgaccgtg ttgcagatcg tcgcgagcag aatgacgcct
     4741 tggggaaggt tcatttccag cgaaagggac gacggacggc ggtggcctga cccacaccgg
     4801 ccaaacctga gtgagcaacg cacaagggat caccctcatg cattcggccc agagtgaact
     4861 ccggatgcat cgcactaaac atgataaaag cggtgtatca ctgtgaccac cgacggcgcc
     4921 acacccgatc gagtgatcgg gtgcaatacg gaagtaagta ctcagatttg gtcaacaatg
     4981 ggaagcggct cgcttgccag atcactgttt cgcgagaccg ccctttacaa tgatcacgta
     5041 ttgcggagcg taaagttttc cgacaggtcg cgcgccggca agctcagcgt tgcaacttcc
     5101 tggcgcgacg gccgatgccc agacacaaca gacccgcacc aagcactgcc aggctgctcg
     5161 gctccggcgt ctgaatttgc aactcgaaca cttcccctgt cagcgctggg gtagcggtgc
     5221 cgtcgccgac cagggttccg ggaggagcac tcgccgtgct tacgatgttg ccgctggtgg
     5281 gcacaccgag gccgttgatg tcggcatcat aaccccatct atcgatgctg atggtgctat
     5341 cgccattgcc gttattcgca ctggcgccat ccaccagctc aatccaataa ttgccggcgc
     5401 caatcgtcaa actcggggtt aacgttatat ttgtgtaaga ctgcgtcgac aatagcgggt
     5461 tattgtcgaa aatcgtgccg agcaacgttg cgttggtcag cgttaccgga acgccggggg
     5521 tatatgaggg aaggcttggg ttaccctctg agccattggg aaccagataa accaactcgg
     5581 acccggctcc cgcagccgat ttaagttcca tcgccagcgt caccgacgtg attgtttcgg
     5641 tggacgaggc gctgaacgag tcaccaagcg gtccgtgacc cgatgtggtg ttcgccacca
     5701 acccggccac attggtctgg ccggtgatcg tgtcataaac cggcactgcg cgtgccgatc
     5761 cagcagcgag taccagcata agcccagatg caacaccaac aatcttcatc gcagtatcct
     5821 taaatccacc cgattggagt cggctcggag ggaagcaagc ctcgtgccat agcaaggaac
     5881 ggcatcaatt caaccattta gtgcacgcga tcccgacgat agtgccagag ttgtaaaatt
     5941 ttccgacgga taccgactgc ctggaccttc aaaacgaagg tatgaacagc aaaatgtggt
     6001 cgaagaccga gttgccacga gcacagcatt aatcgtccgt taacgaactg ctaaattgca
     6061 cgaccggccc gtaatcaatt cttttgcaaa accttcgttg gatcgcattg taaagcgtca
     6121 atgttttata ccgggccagg ctttcgttgc ccgacatgtt ctatgttgcg tcccgctcca
     6181 gacataccgc gggcaattga caccatatcg tcacgatcgt tggacaggtc atggcagccc
     6241 agggaagctc ggctgaaccg tcagtccaac gcgacaacct gcgaccggac tgttcgaccc
     6301 cgtaccaacc cgtgagcagc cgcggatcat cagccggaat caccacctca ctggtgtgcg
     6361 accggatgac gatcgaactg accctgacgc cgagggaccg ggctccaccc agatacggcg
     6421 cacgccgatc agccgggacg acacgacgcg actcaagtcg caggcattcc accccgggag
     6481 gcacgacgaa ccgataggtc ccttggtcac tgagcatcgg acgaatagtg acgccatcgg
     6541 ccgacaacca aacggcagcg cccggcgccg ccgttccggt tgatgcatgt gatccggtca
     6601 actgcggcca aacgagcctg gcctcatcaa cctccacatt gaatttcata tccgccgcga
     6661 gcggaacgtc cgccgcgagc ggaacgtccg caccgacccg ctcatccgcc cgggtaatcc
     6721 aattgttcgt gcccttagga gtcaggatgt cgggaaacgt tgctgccagg tcgtacccca
     6781 attccccgat caggtcaccg tggcacgcct cgaattcagc gacctgggcg gccgaaagca
     6841 tcatgctcca tttggaaaga acgcgtgaat ggacctgcgg acgcaaagcg agtgccgcct
     6901 catccatccg acggatatcc tccgagcgag ccacatcgag agccgcctga ctctgctccg
     6961 ctgtgaagcc gaaatggtcg aagattcgca gcatttcgct gtcgaaatcc gccatcacgt
     7021 cctctagcct gatgtccatt gccaccaggc cgtacgatgt ccactcccgc atcgcctcga
     7081 gcgtgcaact tgtatagccc tcacgttcga acttcagacc ctcgttcatg tcgcggtcga
     7141 gcagattttg gcggtacgac ctgccattca ggcgttcgag atggcttcgt ttccaatcct
     7201 cgggccggtg cgcgagggaa tgatcgacct gcggccagcc gatgggcggc gtcggatcca
     7261 gatcgctatt ggtgcaccat ttctcggcgc aatgccgatg atacaggtaa cccgagaccc
     7321 agatatcgcg cggatcgcgg atcatgcgga tcgctcgata cggccgatcg cgtaaagcgg
     7381 ccaaagcgga ctgcgagagc agggagtgag gcagcagaac aacgtccggg tcgggtgcga
     7441 tgtgatcgac cagtccgaag taattgacca gagtcaggcc cagtcgttcg ctgaccttgg
     7501 tcatgacgtg cagcagcagg ctcgtccctg acttgtgata agagaaaacg atcaaccggg
     7561 atgaaagttg ggcgatccac cgacactccg ctgcgcccta cgcaattagc gggtgaacgc
     7621 ccgaactggc actatttgcc catcatcatc ccgttatggc gagcgcacga gccatctttt
     7681 cacgtgtcca acggcaacgg cacaatccaa cgcgaaagac ggcccggttg gcgtggccgc
     7741 gatcaacct
//
LOCUS       DATAVD010001815         3379 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3711046, whole genome shotgun sequence.
ACCESSION   DATAVD010001815 DATAVD010000000
VERSION     DATAVD010001815.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3379
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3711046"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="VHX39_34655"
     CDS             <1..264
                     /locus_tag="VHX39_34655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996340.1"
                     /translation="QPEWNDLECMWLRRVTPPVWQANIIEAVEVLHAEGGNAFNLTLH
                     PWIAGQAHRIRYLRDALHHVLGKPQIWRATTDDVAEAARSQLV"
     gene            complement(261..1214)
                     /locus_tag="VHX39_34660"
     CDS             complement(261..1214)
                     /locus_tag="VHX39_34660"
                     /inference="COORDINATES: protein motif:HMM:NF006564.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase family protein"
                     /protein_id="HEX3996341.1"
                     /translation="MAAMTPQFDRFAKFVATLGRGPGRGRALSREEAREAFGMVLRQE
                     ADPHQIGAFLMLLRYRGEDAPEIAGMVEAARETIGWQGSRIDLDWPSYGAGRTRGAPW
                     FLLSALALARAGAAVLMHGSNEYSAGVSVEAGLQAIGTDVTGFTYVTLASLSPIMNDL
                     LQMRRLFGLRSPVNTVARLLNPGDALASVDGVFHPPYLAVHLGVAELLARHRLFVLKG
                     GGGEAERVPLKSASGWLWDETSGRSEIELPPREGLSPLSPASDTPELLAAVWRNEIAP
                     PTAVATVIATIGLGLLALGWATTAEAAERDAERIWQARLPA"
     gene            1279..2022
                     /locus_tag="VHX39_34665"
     CDS             1279..2022
                     /locus_tag="VHX39_34665"
                     /inference="COORDINATES: protein motif:HMM:NF014016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CbiX/SirB N-terminal domain-containing protein"
                     /protein_id="HEX3996342.1"
                     /translation="MFTRDALLLIGHGSERLVDAARPLLAHAEVIRETGRFAEVKVGM
                     LFGDPDVASVVATLTSPVVHVVPFFFNEGYFTRIVIPNLLLPLASASRVLRFCPPVGS
                     HEAMASLIESRALRRCETHGIDPKSLSVLLVGHGSAQSPGRARTLLRDAAILDNGSRF
                     GWVRVAYLEEPPFVADALANARGHIVAIIACLANEGKHATHDLPCLIAAERDERGTHW
                     PPVHDLGSIGADEAMPQLIMDQVMAARPV"
     gene            2052..3104
                     /locus_tag="VHX39_34670"
     CDS             2052..3104
                     /locus_tag="VHX39_34670"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052689 - carboxylic ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HEX3996343.1"
                     /translation="MFAVVGCYTTPDRDGRGDGIRVYRVGSAGDQWTEIQHLGGLENP
                     SLFTLRRDQSVLYSVHGGRNLVSAFAVERDTARLTLLNQIDCQGNNPVDSALDPSERF
                     LVVGNYGSGTVSVIPLDSDGRLLPVSQLVTLNGTPGPDPVQQTSSHPHAVIFDRSGNY
                     VVVPDKGLDKTFLFRFAFGRLVTTAQESVASKPGAAPRHTVFHPSLPILYVNNELDST
                     VTVFDWNAGHAAEAQVISTIPHGQRGRNTTAEIAASPCGRFLYVSNRGEDSVVLFRIA
                     PDTGQLTYAGQTPTGGRRPRFFTLDPAAKRLYAANQDSDDIAGFRIDPDTGALQPMGV
                     VARMGSPSAISFVDGP"
     gene            3153..>3379
                     /locus_tag="VHX39_34675"
     CDS             3153..>3379
                     /locus_tag="VHX39_34675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996344.1"
                     /translation="MARTVRGRKSAAKQAASRKAAPKARAPVKKRAAVKQQAAANKRA
                     ASKKQAPAKQRAGVKQQAAVKQQAAVKKQAG"
BASE COUNT          628 a         1025 c         1076 g          650 t
ORIGIN      
        1 cagccggaat ggaacgacct cgaatgcatg tggttaaggc gcgtgacgcc gccggtctgg
       61 caagccaata tcatcgaggc ggtggaggtt ctgcatgccg agggcggcaa tgcgttcaat
      121 ttaacgctgc atccatggat cgcgggtcag gcgcatcgca tccgctatct gcgcgacgca
      181 ctgcaccacg ttctgggtaa accgcagatc tggcgtgcaa cgaccgatga cgtggcggag
      241 gcggcgcgct cgcaattggt ttaagccggt agccgtgcct gccaaattcg ttctgcatcg
      301 cgttcggcgg cctcggctgt cgttgcccat cccaatgcga gcaatcccag acctatcgtt
      361 gcaatgacgg tcgcgacggc agtcggtggc gcgatttcgt tacgccaaac ggcagccagc
      421 agctcgggcg tatcggatgc cgggctcaac ggagacaggc cttccctggg cggcagttcg
      481 atctcagacc ggcccgatgt ctcatcccac agccagccgg aggcggactt cagaggaaca
      541 cgttccgcct cgccgccacc gcccttcaga acgaacaacc ggtgccgtgc cagcaactcc
      601 gcaacgccca ggtgaacggc caagtagggt gggtggaaaa cgccatcgac gctggccagt
      661 gcatcgccag ggttgagcag ccgcgccacg gtattgactg gtgaccgcaa gccaaataat
      721 cgccgcattt gtaacagatc attcattatc ggcgacagcg aagccagcgt gacgtaggtg
      781 aacccagtga catcggtgcc gatcgcctga agacccgcct ccaccgatac gcctgcagaa
      841 tattcgttcg aaccgtgcat cagtaccgcc gccccggccc gggccaatgc cagcgcagag
      901 agtagaaacc acggcgcgcc tcgcgtgcgg ccggcgccgt atgatggcca gtcgaggtcg
      961 atacgcgatc cctgccagcc gatcgtttcc cgcgcggcct cgaccatgcc ggcgatctcg
     1021 ggggcatctt cgccacggta acgtaacaac atcaggaacg cgccgatctg atgcggatcc
     1081 gcttcctgcc gcaacaccat gccaaacgcc tctcgcgctt cctccctgct cagtgcacga
     1141 ccccttcctg ggccgcgccc caaagttgca acgaacttcg cgaacctatc gaattgcggc
     1201 gtcatcgcgg ccatgtaatc cccagcggtt gtcctggcaa ccggattgcc gcaggatggt
     1261 tacggcgagg aggcaccggt gttcacacgt gatgcgctgt tgctgatcgg gcatggctct
     1321 gaacgcctgg tggatgcagc acgtccgctt ctggctcatg ccgaggtcat tcgcgagacc
     1381 ggccgtttcg ccgaggtcaa ggttggcatg ttgttcggcg acccggacgt tgcctcggtt
     1441 gtcgcgacgc tgacctcgcc ggttgttcac gtcgtgccgt ttttcttcaa cgaaggctat
     1501 ttcaccagga tcgtgattcc caatctgctt ttgccgctgg catccgcgtc gcgggtcctt
     1561 cgtttttgtc cgccggtcgg ctcgcatgaa gccatggcga gcctgatcga aagccgcgca
     1621 ctgcgccgtt gcgaaacaca cggcatcgat ccgaaatcgc tgtcggtatt gctggtcggc
     1681 catggctcgg cgcaaagccc cggacgggcg cgaaccttgc tgcgcgatgc ggcgatactc
     1741 gacaatggaa gccgattcgg ctgggtccgc gttgcctatc ttgaggagcc gccatttgtc
     1801 gctgacgcgc tcgccaacgc acgcggtcat atcgttgcga ttattgcttg tctggccaac
     1861 gagggtaaac atgctactca cgacctgcca tgtttgattg ctgccgagcg cgatgagcgg
     1921 ggaacgcatt ggccgcccgt ccacgatctg gggtcgatcg gcgcggatga ggcaatgccg
     1981 cagttgatca tggaccaggt catggccgcg cggcccgtat agttcgctcc ggcgaggaag
     2041 ggaggacgcc agtgtttgct gttgttggat gctatacgac gccggatcgt gacgggcggg
     2101 gcgacggtat ccgggtttac cgtgtcggca gcgcgggcga tcaatggacc gagatccagc
     2161 accttggcgg gttggagaat ccatcgctgt tcacactgcg gcgcgaccaa tcggtgctgt
     2221 attcagtgca tggcgggcgc aatctggtca gtgcgttcgc ggtggagcgc gacaccgcca
     2281 ggttgacgtt gcttaatcaa atcgactgcc agggcaataa tccggttgac tcggcgctcg
     2341 atccgtctga gcggtttttg gtcgtcggaa actatggcag cgggacggtc tcggtcatac
     2401 cgctggattc ggacggccgg cttttgccgg tcagtcagct tgtcaccttg aatggaacgc
     2461 cgggaccaga ccccgtgcaa cagacgtcgt ctcacccgca tgcagtcatt ttcgatcgat
     2521 ccgggaatta cgtggtggtt cccgataaag gtctcgacaa gactttcttg ttccgctttg
     2581 cattcggccg gctggtcacc actgcgcagg aatcggtcgc atcgaaacct ggcgctgcgc
     2641 cccggcacac ggtgtttcat ccgtcgttgc caattctgta tgtcaacaac gagctcgatt
     2701 cgacggtgac ggtgttcgac tggaatgcgg gccatgctgc cgaggcgcag gtgatcagca
     2761 cgatcccgca cggtcaacgc ggccgcaaca ccacagcgga aatcgccgcg agcccatgtg
     2821 gacggtttct ttacgtatcg aaccgcggtg aggacagtgt cgtattgttc cggatcgcgc
     2881 ccgataccgg ccagttgacc tacgccggcc aaacgccaac gggagggcgg cggccgcgct
     2941 tcttcacgtt ggatccggcg gcgaaacggc tttatgctgc aaatcaggac agcgatgaca
     3001 ttgccggctt ccggatcgat ccggacaccg gggcactgca gcccatgggc gtcgtggcgc
     3061 ggatgggtag cccgtcggcg atcagttttg tcgacggacc ttgattgccg tatcattagc
     3121 tcgactttgg ctcatgcgtt tgggggatag acatggcgag gaccgtccgc ggccgcaaaa
     3181 gcgccgcgaa gcaggccgct tccaggaaag ccgcgccgaa ggcgagggcc ccggtgaaga
     3241 agcgggctgc ggtgaagcag caggctgcgg cgaacaagcg ggctgcctcg aagaagcagg
     3301 ccccggcgaa gcagcgggct ggggtgaagc agcaggccgc ggtgaagcag caggctgcgg
     3361 tgaagaagca ggctgggag
//
LOCUS       DATAVD010001816         2637 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2219222, whole genome shotgun sequence.
ACCESSION   DATAVD010001816 DATAVD010000000
VERSION     DATAVD010001816.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2637
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2219222"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2637
                     /locus_tag="VHX39_34680"
     CDS             <1..>2637
                     /locus_tag="VHX39_34680"
                     /inference="COORDINATES: protein motif:HMM:NF014442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HEX3996345.1"
                     /translation="AVEGFLQCVIEQSCNAAVLRAPEILWRQTLTIVYRLLFILKLES
                     AAEPGGGFSFAASEAWRRGFSPNRALGPLARRHLDLGHDTGRLLEDGLRLLFQVCRDG
                     ILHSNLSIAPLGGGLFDPAATAAIDRLHWGEHGVALLLDRLLWTAPRGRERERVHYGS
                     LDVEELGRIYESLLDLQPDIATMPMVRTRHGRLEAVVAAKSWSAPDAEAIEHIPTGRF
                     FLRTGLGRRAGGSYYTPHEFVRFLVRETLSPLVKPALDSADPGALLRLKVFDPAMGSG
                     HFLVETCRFLADALYDACCRCDLVGTAEARRKIDCLPDPDQRLAAYLPARSPDQSEAG
                     ISRARAMAICRRLVTVHCLYGIDQDPLAVELAKLSLWLESFAEGLPLTFLDHRLIVGD
                     SIAGPFFRDLSRMPVGGAELDPLLARGVSGQLQHLIGEVMMEVRNLEASIGTSIADVM
                     AKQSAKSRLDGLLLPLRALARAWSGAVRTGARAANDAWVALARSVADTGAWPDVLDSH
                     QSALLASDEIALPPDLTFPEVFRPDEGTGGFHAVFGNPPWDVVHYQTKEFLAGYDLRV
                     MAAETKRERAAIEQQLLADSTIRHGFVCYKNAFIERKRLCDRLFSGLAASGSIDLFQV
                     FTARMLDCVAPKGAIGLVVPSSFHANEGTMQLRRRLLDGTVMECCFSFENRKKLFDIH
                     GRQKFSLIIARRPGTTVAFRCAFYLHSIAQLDDPDRIMVYDREFIEATGGACETFLEL
                     RGQADLRVAKHLFVGSPDMQTWLSAHRITFGREAHMTDDSHRFTPIGRVTSSDSLPMH
                     EGKTFHQFTDRWKSAPRYAIHIDAMRDKPGWLRASGHYRLAFREISRSTDERTMIAAI
                     LPPGHICGHKATCEKTPWTRPD"
BASE COUNT          477 a          755 c          796 g          609 t
ORIGIN      
        1 cggccgtcga aggttttctc cagtgtgtta ttgagcaaag ttgcaacgcg gcggtcctac
       61 gggcgcccga gatcctgtgg cgccagacgc tcaccatcgt ttaccggctg ctgttcattt
      121 tgaaattgga aagtgcggcc gaacctggcg gaggtttcag tttcgcggca tctgaggcat
      181 ggcgtcgcgg tttttcccca aatcgggcgc ttggcccgtt ggcccgccgc catctcgatc
      241 ttggccatga caccggccgc ttgctggagg atggcttgcg tctgttgttt caggtttgcc
      301 gtgatggaat tttgcattcg aatttgtcga tcgcacccct gggtggcggt ctgttcgatc
      361 ctgcagcaac tgccgcaatc gatcggctgc actggggcga gcacggcgtt gcgttattgt
      421 tggatcgctt gttgtggacg gcaccacgag gccgggaacg cgagcgcgtc cattatggct
      481 ctctggacgt cgaggaactt ggccggattt atgaatcatt gttggatctg cagccggata
      541 tcgcgacaat gccaatggta cgaacgcggc atggacgatt ggaagcagtt gttgcggcga
      601 aatcatggtc cgctccggat gccgaggcga tcgaacacat ccccaccggg cggttctttc
      661 tccgtaccgg gctggggcgc cgcgccggtg gctcctatta cacaccccac gagttcgtac
      721 gatttttggt gcgcgagacg ttgagcccac tggtcaaacc ggcgctcgac agcgctgacc
      781 cgggtgcgct tctgcggctt aaagtgttcg accccgccat ggggagcggc cattttctgg
      841 ttgagacctg ccgtttcctt gccgacgctt tgtacgatgc gtgttgccgc tgcgacctgg
      901 tcggcacggc ggaagcgcgt cggaaaattg attgtctacc cgatccggat cagcggctgg
      961 ctgcgtatct tcccgctcgg tcacctgatc aatcggaggc gggaatttcg cgggcgcgag
     1021 caatggcgat atgtcgtcgt ctggtcacgg tccattgtct ttatggtatc gatcaggatc
     1081 ctttggccgt ggaactggcg aaattgtcgc tgtggttgga gtcatttgcg gaagggttgc
     1141 cgctgacgtt cctcgaccac cgcctgattg tgggtgattc catcgccgga ccattctttc
     1201 gcgatctttc gcggatgcct gttggaggcg cagaactcga cccgctgctc gcacgcggcg
     1261 tgagcggtca actccaacat ctgatcggcg aggttatgat ggaggtccgt aatctggaag
     1321 cctcgatcgg caccagcatc gcggatgtca tggcaaagca atctgccaaa tccagattag
     1381 atgggttgtt gctgccgtta cgtgcccttg cacgcgcatg gtccggtgca gtcagaaccg
     1441 gcgcacgtgc ggccaatgat gcctgggtcg cgctcgcccg atcggtcgcg gataccggtg
     1501 cgtggcccga tgtcctcgac agccaccaat cagcactgct ggcgtctgat gagatcgcgt
     1561 tgccaccaga tcttacgttt ccggaagtgt ttcgacccga cgaaggaacc ggtggctttc
     1621 atgcggtatt cggcaatccc ccctgggacg tcgttcatta ccagacgaag gagttcctgg
     1681 cgggctacga cctgcgtgtc atggcagccg agacgaagcg ggaacgtgcg gcgatcgaac
     1741 aacaactgct cgctgattcg acaatcaggc acggctttgt ttgctacaag aacgcattca
     1801 tcgagcggaa gcgtctctgc gatcggttgt tctctgggct tgcggcgtcg ggatcgatcg
     1861 atctgtttca ggtattcacg gcgcgcatgt tggattgcgt cgccccgaag ggcgctatcg
     1921 gtctggtcgt tccttcgtcg tttcatgcca acgaaggtac catgcagcta cgacgcaggc
     1981 tccttgatgg cactgtgatg gaatgctgct tttcgtttga aaaccgtaag aaactattcg
     2041 atatccacgg ccgccagaaa ttcagtctga tcatcgcccg tcggccagga acgacagtcg
     2101 catttcgctg tgccttttat ctgcactcga tcgcgcaact ggacgatccg gaccgcatca
     2161 tggtgtacga ccgcgaattt atcgaggcaa ccggtggcgc ctgtgagacg tttctcgaac
     2221 tgcgcgggca ggcggatttg cgtgtcgcaa agcacctgtt cgtcggttca ccggacatgc
     2281 agacctggct ttcggcgcac cgcataacgt tcggccgcga agcccacatg accgatgatt
     2341 cgcaccgctt cacgccaatc ggtcgcgtaa cgtcatccga ctcattgcca atgcacgaag
     2401 gcaaaacttt tcatcagttc accgatcggt ggaagtctgc gcctcgctat gcgatccata
     2461 tcgatgcgat gcgcgataaa cccggctggc tacgcgcatc aggtcactat cggctcgcct
     2521 tccgcgagat ttcgcgctca accgacgagc gaacgatgat cgcggcaatc cttccgcccg
     2581 gtcatatctg cggccataag gcgacctgcg agaagacgcc gtggacacgg ccggacg
//
LOCUS       DATAVD010001817         3469 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1845157, whole genome shotgun sequence.
ACCESSION   DATAVD010001817 DATAVD010000000
VERSION     DATAVD010001817.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3469
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1845157"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..991)
                     /locus_tag="VHX39_34685"
     CDS             complement(<1..991)
                     /locus_tag="VHX39_34685"
                     /inference="COORDINATES: protein motif:HMM:NF039484.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEX3996346.1"
                     /translation="MSLPSWFTEARGFRADLIALLAGALAALALPPLAMLPLLLVAFP
                     TLLWLINASGRGIVAARRGWWFGFGYHLVGLYWITEAILFEAARFWWLVPIAVPALAA
                     VLAIFIAIPAWLAWFAAPPGPSTASRATDVVQNRSGAGQVMTLAGGWVLGDLARQFFA
                     TGFPWNPLGSVWAIRGQIGDVMLQPAALASVHGLTLVTIILACAPVLRRRGQAVCVAL
                     FLAWIGYGLNRVAAPLPPDQPLHVVLVQGNVPQGQKWDPAMRNAVFDRYLHLTDDGVR
                     AAGPGPSVVVWPETASPFLLDTAALQAIAAAGHDETELVGAVRFDEDDRPRNSL"
     gene            complement(1123..1926)
                     /locus_tag="VHX39_34690"
     CDS             complement(1123..1926)
                     /locus_tag="VHX39_34690"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003617073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acyltransferase"
                     /protein_id="HEX3996347.1"
                     /translation="MAEPPFPELRAGCLGVRIAVDPAEIDAVQALRYRVFYSEMGAKA
                     DPVTDRDKRDRDVYDAVADHLLVVDHAIGPGPEGVVGTYRLIRRTAADRIGQFYSADE
                     YDLAVIERTPGEIMELGRSCVDAQYRNRRVMQLLWGGIAAYVFHYKIDLMFGCASLHG
                     IDPDAVAAELTYLYYYHLAPPALRLRALPHRYVEMRRLDRDEIDPKRALALLPPLIKG
                     YLRLGGFVGDGAVIDAQFNTTDVAVVVKTDMVTESYYRHYERQVRDTPE"
     gene            complement(1926..2381)
                     /locus_tag="VHX39_34695"
     CDS             complement(1926..2381)
                     /locus_tag="VHX39_34695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003617071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEX3996348.1"
                     /translation="MESRIERLCVERGVKMTGQRRVIARVLSDADDHPDVEELYRRAT
                     RLDQHISIATVYRTVRLFEEKGILERHDFGGGRARYEPSEESHHHHLIDIETGKVIEF
                     QDAEHEELMRVIAARLGFDLVSLRLELFGRKRKTNTGHRASHQTEEPVK"
     gene            complement(2611..3081)
                     /locus_tag="VHX39_34700"
     CDS             complement(2611..3081)
                     /locus_tag="VHX39_34700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008618794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MucR family transcriptional regulator"
                     /protein_id="HEX3996349.1"
                     /translation="MSDSSSSHGSLTPGPSTLGILGLTAQIVSAHVGNNRVATEELPG
                     LIQQVYLALNGSTAGSSSSQLRPTTPAERPRPAVPISKSVFSDYIVCLEDGKKLKMLK
                     RHLQTAYSMTPEQYRAKWGLDGNYPMVAPEYAKKRSSLAKAIGLGTRPREARRN"
     gene            3179..3424
                     /locus_tag="VHX39_34705"
     CDS             3179..3424
                     /locus_tag="VHX39_34705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HEX3996350.1"
                     /translation="MNSILTADRDIDITRDVCPMTFVKTRIALDRLSTGQTLLVRLRG
                     EEPIRNVPRTATEQGHTVLEQHEEADGTVLLLIRKGH"
BASE COUNT          706 a         1062 c         1067 g          634 t
ORIGIN      
        1 acagcgaatt ccgtggacgg tcgtcctcat cgaagcggac tgcaccgacc agttcggtct
       61 cgtcgtggcc ggctgcagca atcgcctgga gtgccgccgt gtcgagcagg aacgggctcg
      121 ccgtctccgg ccaaaccacg acgctcggac cgggaccggc cgctcgcacg ccgtcatcgg
      181 tgagatgaag gtagcggtcg aacacggcgt ttctcatcgc cgggtcccat ttctggcctt
      241 gcggcacgtt gccttgcacc aacacgacgt gcagtggttg gtccggtggc aatggcgccg
      301 ccacacggtt caggccgtag ccgatccagg cgagaaacag cgcgacgcaa acagcctggc
      361 cgcgccgacg cagcactggc gcgcaggcca ggatgattgt taccaaagtc agaccatgta
      421 ccgatgccag cgcggccggt tgcagcatga cgtcgccgat ttgcccacga atagcccaga
      481 cgctgcccag ggggttccag gggaacccgg tcgcgaagaa ttgccgcgcc aggtcgccta
      541 acacccaacc accagcgagc gtcatcacct ggccagcccc ggaccgattt tgcacaacgt
      601 ccgttgcgcg tgaggcggtc gaaggaccgg gcggtgcggc aaaccacgcg agccaggcgg
      661 ggatcgcaat gaatatcgcg aggactgccg caagggccgg aaccgcgatc ggcacgagcc
      721 accagaaccg cgctgcctca aacaggatcg cctcggtgat ccaatacagg ccgaccaggt
      781 gatagccgaa accaaaccac caaccccgcc tggcagccac aatgcccctc ccggaagcgt
      841 tgatcagcca aagcaaagtg ggaaaggcca ccagcaacag ggggagcatt gccaaaggcg
      901 gcagcgcgag agccgcaagt gcgccagcca ggagagcgat caggtccgcg cgaaagcccc
      961 gcgcctcggt gaaccaggat ggcagggaca tgagcggtct aatccaagag atttgcagac
     1021 cggatttccg tctttcccgt cagggggcga ccgatcattc gataaggttc agggcggacc
     1081 gggatgacag agagaatggt gcgtaatccc ttgcgcgacc gcctactccg gcgtgtcgcg
     1141 gacctgtcgt tcatagtggc ggtaatagga ttcggtcacc atgtccgtct tcaccacgac
     1201 cgcaacatcg gtggtattga actgcgcgtc gatcacggcg ccgtcgccca cgaacccgcc
     1261 cagacgcaga tagcccttga tcagcggcgg cagcaacgcg agcgcccgct taggatcgat
     1321 ttcatcacga tcaaggcgtc gcatttctac atagcgatgc ggcagcgcgc gcagccgcag
     1381 tgccggtggc gccagatgat agtaatagag atacgtgagt tcggccgcga ccgcgtctgg
     1441 atcgatcccg tgcaggcttg cgcagccgaa catcaggtcg atcttgtagt ggaacacgta
     1501 ggcggcaatc ccgccccaga gcaattgcat cacccggcgg ttacggtact gggcgtcaac
     1561 gcaggaccga cccagttcca tgatttctcc aggggtccgt tcgatcacgg cgaggtcgta
     1621 ttcgtcggcc gaatagaact gaccgatccg gtccgccgcc gtgcgccgga tcaggcgata
     1681 ggtgccgacg acgccctccg ggcccggccc aatggcgtga tcgacgacca gcaaatgatc
     1741 ggcgacagcg tcgtacacgt cccggtcgcg cttatcacga tcggtgaccg ggtcagcttt
     1801 ggcacccatt tcgctgtaga aaacccgata gcgcagggcc tgcacggcat cgatctcagc
     1861 cgggtcgacg gcgatccgta cccccaggca gcctgcgcgc aattcgggga agggcggttc
     1921 ggcgatcact tcaccggttc ctccgtctgg tgcgatgcgc ggtgcccggt gttggtcttc
     1981 cgcttgcggc cgaacaactc cagacgcaac gatacgaggt cgaagccaag ccgggcggca
     2041 atcacgcgca tcagttcctc gtgctcggcg tcctgaaatt cgatgacctt gccggtctcg
     2101 atatcgatca ggtggtgatg gtggctttct tcactcggct cgtaccgggc acgtccgccg
     2161 ccgaagtcgt gccgttccag gatgcctttc tcctcgaaca gccggaccgt gcgatacacg
     2221 gtggcaattg aaatgtgctg atcgagtcgc gtggcgcgcc ggtacaactc ctcgacatcc
     2281 ggatgatcgt cggcatccga cagcacgcgc gcgatgaccc ggcgctgtcc ggtcatcttc
     2341 acgccgcgtt cgacgcacaa gcgctcaata cgcgattcca tcggcctcct ggtgagtatc
     2401 ccgaatggtc agttccggcg ggaaggcacg tccaggacga accggtagcc gaagttcagc
     2461 gtatctgtcc aatgggggtg gtgaaattcc cggcgtgggg tcccggatcg ccgttgggca
     2521 ccggttcgcg aacggggcag gcggcactcg gcgcccaggt ccgggcggcg ccgaccacgc
     2581 gtcgcacgaa accggcgagg caagccccgg tcagttccgt ctggcttctc gtggccgcgt
     2641 tcccaggcca atcgccttgg cgagcgaaga tcgcttcttc gcatattctg gcgcgaccat
     2701 cggatagtta ccgtcgaggc cccatttggc acggtattgt tccggggtca tgctgtaagc
     2761 cgtttgcaaa tgccgtttga gcattttcag cttcttgcca tcttccaggc agacgatgta
     2821 gtcgctgaat acggattttg aaatcggcac ggcaggcctg ggccgctcgg caggcgttgt
     2881 gggacgaagc tgtgatgacg atgaacccgc ggtcgagccg ttaagtgcaa ggtaaacctg
     2941 ctggatcaat cccggcagtt cttccgtcgc gacccggtta ttcccaacat gcgccgagac
     3001 tatttgagca gtcagaccca aaatgcccag ggtggacgga ccaggcgtca gggaaccatg
     3061 cgaggaggag ctatctgaca tcgagtggcc cttttattgc gggtgaattt aatcatataa
     3121 gtgtcgctga cgcgatttcg caatggtttt tcttgtcaga taagggtggg caagtatcat
     3181 gaactccatt ttgaccgccg atagagacat cgatatcaca cgtgatgtct gcccgatgac
     3241 tttcgtaaag acccgtatcg ccctcgatcg tctctctacc ggacagacgt tgcttgtccg
     3301 actgcgcggc gaggagccga tccgcaacgt gccccgcact gccaccgagc aaggtcatac
     3361 ggtgttggaa cagcatgaag aagcggatgg aaccgtgctg ctgcttatac gcaagggtca
     3421 ctaactaaat tgcgttcaat taattaaggg cggatcatta agaggatag
//
LOCUS       DATAVD010001818         3088 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2033764, whole genome shotgun sequence.
ACCESSION   DATAVD010001818 DATAVD010000000
VERSION     DATAVD010001818.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3088
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2033764"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..563
                     /locus_tag="VHX39_34710"
     CDS             <1..563
                     /locus_tag="VHX39_34710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HEX3996351.1"
                     /translation="RSKPIEWFEKELIATVPWRFAGSGRRVYPGFVQLTAFMTMNLER
                     HINAHIAQFRALAGGDMDAAETHRRFYEEYCAVMDLPAEFFLETVQRIFQDDHLPLGK
                     LTFNGRPVSPEAIRRTALLTVEGERDDICAIGQTMAALDLCSGVRVDMKSHHLQSGVG
                     HYGVFSGRRWEREVYPKVRQVIQTRS"
     gene            complement(544..1854)
                     /locus_tag="VHX39_34715"
     CDS             complement(544..1854)
                     /locus_tag="VHX39_34715"
                     /inference="COORDINATES: protein motif:HMM:TIGR03914.1"
                     /note="This protein belongs to the uracil DNA glycosylase
                     superfamily, members of which act in excision repair of
                     DNA. However, it belongs more specifically to UdgX branch,
                     whose founding member was found to bind uracil in DNA
                     (where it does not belong), without cleaving it, appears
                     to promote DNA repair by a pathway involving RecA, rather
                     than base excision; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UdgX family uracil-DNA binding protein"
                     /protein_id="HEX3996352.1"
                     /translation="MPIVTLAHETDWTGWRRAARAFVLAGVAPSDLSWTVGGTSDAAP
                     NADGNFTLARTLVALAAQAFQVREVERFALLYTLIWRAHRGELTLSDEDDPDLRIAKR
                     WALAVRADTHRMRTQIRFLRVAPSDQPHFLGWYQPDHFVLEANARLLARRHQANRFTI
                     VTPDGSAHHDTAGLRFGSGLQHPGDDETLLAWWESHYETILHTATAGGGLPEAEDLDE
                     DPRPLDRPPIGPVVLPESQTDATRTLAREARGCERCSLYAPATQTVFGEGPLDATVLF
                     IGEQPGDQEDIIGRPFVGPAGQLLDTALEEAGLDRRRIAITNAVKHFKFTPRGRRRIH
                     QPPSPQEIEICRFWLDAERTALSPKLLVLLGGSAGRAVLGRPVTVTRERGRPFQLPDG
                     STAFLTVHPSYLLRQPDQASRDREYATFVRDLRMVRELISSGSE"
     gene            2371..>3088
                     /locus_tag="VHX39_34720"
     CDS             2371..>3088
                     /locus_tag="VHX39_34720"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEX3996353.1"
                     /translation="MSADSYVGILLGRIWNSAWTLLVLGNVFWASNIIVGRAILGDVP
                     AIALSFWRWTGAFAVSFWFAWPHLKKDWPVLLAHWKIMLALAATGIAFFNTVAYIGLA
                     GTTALNVLLMQSSLPLVVTAWAFVLFKERPSVWQLVAIMISLAGVAFVAAHGSLHALL
                     ALRFYRADVWIMASVIILGSYMVLLRLRPDVHPLSFMQAAMGLGVLMVAPLYMRELSQ
                     GARITNHWQNFVGIAYMAVFP"
BASE COUNT          567 a          892 c          973 g          656 t
ORIGIN      
        1 cacgatcgaa gccgatcgaa tggtttgaaa aggaactgat cgccacggtg ccgtggcggt
       61 tcgcggggag tggccgacgg gtctatcccg ggttcgtaca gctaaccgca ttcatgacca
      121 tgaacctcga acgtcatatc aacgcgcata tcgcgcagtt ccgcgcactg gccggagggg
      181 atatggatgc ggccgagact catcgacggt tttatgagga atactgcgcc gtcatggatc
      241 tgcctgcgga attctttctc gaaaccgttc agcgcatctt ccaggatgat catttgccgt
      301 tgggcaagtt gaccttcaac ggcaggccgg tctcacccga ggctattcgc cgcactgcgt
      361 tgctgacagt ggagggcgag cgggacgaca tctgcgcgat tggccagacc atggccgcac
      421 tcgatctttg cagcggggtg cgggtcgata tgaagtcgca ccatttgcaa agcggcgttg
      481 gccactatgg cgttttcagc ggccggcgct gggaacgcga agtttacccg aaggtccgtc
      541 aggtcattca gacccggagc tgatcagctc tcgcaccatt cgcaggtctc gcacgaacgt
      601 cgcgtattca cggtcgcggg acgcctggtc gggttggcgt aacaaatatg acgggtgcac
      661 ggtcaggaac gccgtgcttc cgtccggcag ttggaacggg cgaccgcgct cacgtgtcac
      721 tgtcacgggc cttcccaata cggcgcgccc ggcactgccg ccgagcaaca caagcaattt
      781 tgggctcaat gcggtgcgtt ctgcatcgag ccagaagcga caaatctcga tctcctgcgg
      841 agagggcggt tgatggatgc gacgccggcc gcgcggggtg aatttgaaat gcttcacagc
      901 gttggtgatc gcaatccgcc gccggtccag ccccgcttcc tccagagcgg tgtccagcaa
      961 ctgtcccgct ggcccgacga atgggcggcc gatgatgtct tcctgatcgc ccggctgttc
     1021 cccaataaac agtacggtgg cgtcgagagg cccctcgccg aacacggttt gcgttgccgg
     1081 tgcatatagc gagcagcgtt cgcagccacg ggcctcgcgc gccagggtcc gtgtggcgtc
     1141 agtttggctt tcggggagga cgaccgggcc aattggtgga cggtcgagcg ggcgagggtc
     1201 ttcatccaga tcttccgcct ccggcaggcc gccgcctgca gtcgcggtgt gcaagatcgt
     1261 ttcgtaatgc gactcccacc aggcaagtaa tgtctcatca tcacccggat gctgcaggcc
     1321 agagccgaac cgcagtccgg ccgtatcgtg gtgtgcggag ccgtcgggcg tgacgatggt
     1381 aaagcggttt gcctgatgtc ggcgtgccag caaccgcgca ttcgcttcaa ggacgaaatg
     1441 atccggttgg taccagccca ggaaatgggg ttgatcagac ggcgcgaccc ggaggaagcg
     1501 gatttgcgtg cgcatccggt gtgtgtcggc tcgcacggcc agcgcccatc gtttggcaat
     1561 gcggaggtcg ggatcatcct catcgctgag tgtcagttcg cctcggtggg ctcgccaaat
     1621 caaagtgtag agcagagcga agcgctccac ctcgcgcacc tgaaaggcct gcgccgccaa
     1681 ggccaccaac gtacgcgcca gggtgaagtt gccgtcggcg ttcggcgcgg cgtcactggt
     1741 gccaccgacg gtccagctga ggtcagaagg tgcaaccccg gcgagcacaa acgcccgcgc
     1801 cgcacgccgc caacctgtcc aatcggtctc atgagccagg gtgacgatgg gcatttggcg
     1861 aatatccgca cttttacttg cgcaggtggt taagttcagc ccttcgtggc aacggaccgt
     1921 cggtttcagg gcctttgcca gccctgtcga acgtgggtcc gtaccgggca ccacgttgac
     1981 cacatcttgc tccatccgga cggcggccgc cagacgaagg cagaccgtag tgcagtcgcg
     2041 agaggttttg caagcattgc cgctgcgtga atgttaccta ctgtcacgtg gcattgcggt
     2101 gacactgatg gcgaataccg aggatttcac gctttctcaa cgtgcgggtc acgagtctct
     2161 gtgacgaccc aggcaagcat aaatcgtgtg gtcacctgat ttcttccaag tcaacatcgc
     2221 cagggtcgcg tgatgcaaat cccatctcga ctacccacca tcgaaaaccg tgctgcggac
     2281 ggaaccgggc cagttcccct gcggcctttg tctgccaaat ggccgcaaac gcagctggca
     2341 aaccgccatg ggcaaggcaa cgatcttggc gtgtcagccg atagctacgt ggggattctg
     2401 ctgggacgga tctggaattc tgcatggacg ctgctcgtgc tcggcaatgt gttttgggcc
     2461 agcaacatta tcgtcggacg ggcgattttg ggcgatgtac ctgccatcgc cctgtcgttc
     2521 tggcggtgga ccggcgcctt tgcggtatcg ttttggttcg catggccgca tctgaaaaag
     2581 gactggccgg tccttctggc acattggaaa atcatgctgg cattggcagc aacgggcatc
     2641 gcgttcttca atacggtggc atatatcgga cttgccggta ctacagcgct gaatgtcttg
     2701 ttgatgcaat caagcctgcc attggtggta acggcctggg cttttgtctt gttcaaggaa
     2761 cggccgtccg tgtggcagct ggttgcgata atgatctcgc tggctggtgt cgcgttcgtc
     2821 gccgcccatg gatcgctgca cgcgttgttg gcgctgcggt tttatcgcgc cgacgtgtgg
     2881 atcatggcct ccgtcattat cctgggcagc tatatggtcc tgttgcggct acggcccgac
     2941 gtgcatccat tgagtttcat gcaggccgcc atgggactgg gcgttctgat ggtagcacca
     3001 ttgtatatgc gcgaactgag ccagggtgcg cggatcacga atcattggca gaatttcgtg
     3061 ggcatcgcgt atatggcggt gtttccct
//
LOCUS       DATAVD010001819         5197 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_919538, whole genome shotgun sequence.
ACCESSION   DATAVD010001819 DATAVD010000000
VERSION     DATAVD010001819.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5197
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_919538"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..266)
                     /locus_tag="VHX39_34725"
     CDS             complement(<1..266)
                     /locus_tag="VHX39_34725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003626712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3996354.1"
                     /translation="MSATLEQTAGAAETEMTDGFHLVIDALQLNGIKTIYNVPGIPIT
                     DLGRLAQAEGIRVISFRHEQNAGNAAAIAGWLTKSPGVCLTVSAP"
     gene            complement(337..1089)
                     /locus_tag="VHX39_34730"
     CDS             complement(337..1089)
                     /locus_tag="VHX39_34730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014200112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEX3996355.1"
                     /translation="MPEPVRKLSIAPLHASVGLRTQACEAIRAAIMRMDIYGQTEEFR
                     LDERQLCQDLGVSRTPIREALSVLEQEGFVHSVPRRGIFVVRKSKREIVEMITVWAAI
                     ESMAARLAASHASSEDIAGLRQVLATFDDDPSGQISEYSDANMAFHKAIIRMGGIELM
                     ASLTDTLFIHMRAVRAVTMTQDNRARRSVADHRAIIAALEARDAARAERLVREHTMGL
                     AAHVERHGDFLDAKPDEPKLAEPTGEPSRQYA"
     gene            1420..2904
                     /locus_tag="VHX39_34735"
     CDS             1420..2904
                     /locus_tag="VHX39_34735"
                     /inference="COORDINATES: protein motif:HMM:NF024267.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HEX3996356.1"
                     /translation="MTARQVRSESVGRRKIDPVQWLAFVAIGLITLTLIVLIWTLTTR
                     AIDDEAMELRTRTNQHVSSVAFVLAREIQDELQLVDQSLKIIQDAWNKDPGAVDLGAW
                     RKQLLALTEVADDIFIADEHGTIVQGTLPQSVGQGFGSAYVTYPNGSLETFDPDGTIN
                     SNGRLPGADGVQARQFLTYIVRPLARPDGWMIGASYRSESITKLLSGATLGQSGVIAL
                     VALKRGGLQAIAGPSAQFANMDFASSELIEQMRKNEAGIWAGVTPIDDIPRTVAYRHI
                     AGRDMSVLVGVSQEAANEPVAGLATMARGLAAVGSLIVLIIAGIFVWTIATLRTARQR
                     LRSFERSELNLVNTRHELAVARARSLLSESEAGALIGSATGGVARLDAALMLTLWNER
                     FAELAGVAMDEAAAGKPVEDLFRRQAAAGLLGGVMDSEAAIATRLTVLHSETRSAEPL
                     TQTGPDGEPLRLSVLGVYDGGRLLLLTHADGSADAGTAEKATEW"
     gene            complement(2926..3432)
                     /gene="folK"
                     /locus_tag="VHX39_34740"
     CDS             complement(2926..3432)
                     /gene="folK"
                     /locus_tag="VHX39_34740"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEX3996357.1"
                     /translation="MILVAIGANLPGSDGSTPLQTCVEAVHALTELPELQLHSLSRWY
                     ETEPVPRSDQPNYVNGVARLHRPQQTTVTPEALLAWLQAIEIRFGRSRSEPNAARTLD
                     LDLIDVDGLVRDMPDPILPHPRTHERAFVLLPLLDVAPDWVHPANGRTGRALLDSVDR
                     SGVRLLPQ"
     gene            3567..4175
                     /locus_tag="VHX39_34745"
     CDS             3567..4175
                     /locus_tag="VHX39_34745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003618058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEX3996358.1"
                     /translation="MHFLPTERTALFIDGANLYSASRNLGFDVDYRNLLEFFRKKTHV
                     IRAYYYSAVLETEEYSPLKPLTDWLAYNGYTLVTKPAKEFTDSMGRRRVKGNMDIEVA
                     VDMLELAPRLDHAVLFSGDSDFRRLVEAMQRRGVRVSVVSSIRSSPPMGADELRRQAD
                     QFLELADIAPEFTRRQTELRPRPVSAMRHTPAEPFADPTDAA"
     gene            4172..4831
                     /locus_tag="VHX39_34750"
     CDS             4172..4831
                     /locus_tag="VHX39_34750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEX3996359.1"
                     /translation="MSGQPRSPDRDCGLCPRLKEYRTANRAAHPEWHNAPVSSFGELD
                     ARLLVVGLAPGVRGANRTGRPFTGDFAGVLLYQTLPRFDLASGIYGASPDDGLSPRSC
                     RITNAVRCVPPGNLPTTAEVNACNPFLADEMAAMPGLRAVLALGLVAHKAVLRARGLR
                     AGVAVFRHGAIHELPDGLLLADSYHVSRLNTNTGRLTEAMFHDAVGALVARMALHQPA
                     N"
BASE COUNT          978 a         1554 c         1614 g         1051 t
ORIGIN      
        1 ggggctgaaa cggtcagaca tacgcccggc gatttcgtca gccatccggc aatggccgcg
       61 gcgttgccgg cattctgctc gtgacggaac gaaatcaccc gtatcccttc agcctgcgcc
      121 aggcgaccca gatcggtgat cgggataccc ggcacattat aaatcgtttt gatcccgttc
      181 agctgcagcg cgtcgatgac gaggtgaaac ccgtcggtca tttcagtttc agctgcgccg
      241 gcagtttgct ccagtgttgc ggacatcaga ccctccggtg gcgttctgcc ttgtttgtgg
      301 acatcaatag gttcctcctg gaaactcgaa acgggcttag gcgtattgtc ggcttggttc
      361 gcccgttggc tcggccagtt tcggctcatc cggtttcgcg tcaagaaaat cgccgtgccg
      421 ttcgacgtgc gcggcgagcc ccattgtgtg ctcccgcacc aggcgttcgg cgcgggccgc
      481 atcacgcgcc tccaatgcag cgataatggc gcgatggtcg gcaaccgagc ggcgcgcccg
      541 gttgtcttgc gtcatggtga cggcacgcac ggctcgcata tgaatgaaca gcgtgtctgt
      601 caggctggcc atcagttcga tcccgcccat ccggatgatc gctttgtgaa atgccatgtt
      661 ggcatcggag tattcgctga tctgcccgct gggatcgtca tcaaacgtgg ccagcacctg
      721 acgcaacccg gcgatgtcct cgctgctggc atgtgaggcg gcgaggcggg ccgccatgct
      781 ctcgatcgca gcccagacgg tgatcatctc gacgatctcg cgcttcgatt tgcgcaccac
      841 gaagatgccg cgccgaggca ccgagtggac aaacccttcc tgttccagaa ccgacagcgc
      901 ctcgcggatt ggcgtgcggc tgaccccgag gtcctgacac aactgacgtt cgtcgaggcg
      961 gaattcttcg gtctggccgt agatatccat ccgcatgatc gccgccctga ttgcctcgca
     1021 cgcctgggtg cgcaggccga cgctggcgtg caacggcgca atggacagct ttctgacggg
     1081 ttccggcatc tgtggctcag ggtttggaca taggtttttc agcgggacgc aagcgccagc
     1141 ggtatttaga atattgtata ccagcctggt caagtccccc cacacgccat cggtgccgta
     1201 aggcgggccc aggcgtgaga gtaacctgag tgtcggcgtt gcttcgtccg gacggttcgg
     1261 gttatgcaga gttcggggcg cgaacctgcg tgtgtcgctg cgaggaacac cggccccatg
     1321 cgcatcacaa cgatccgatc ccccgacaac gccggcgcgc ccgcaccgcc gcagcagcgc
     1381 cgccgattca gaagccggtc ctccggcgga acacgcgcca tgacagcgcg gcaggttcgg
     1441 tcagagtccg ttgggcgacg caaaatcgac cccgtgcaat ggttggcgtt cgttgccatc
     1501 ggcctgatca ccctgacgtt gatcgtgctg atctggaccc tgaccacgcg ggccattgac
     1561 gacgaggcaa tggaactccg gacccgtacc aatcaacacg tcagctcggt tgccttcgtc
     1621 ctcgcgcgcg aaatccagga tgaactgcaa ctggtggatc agagcctgaa gatcatccag
     1681 gatgcctgga acaaggaccc tggcgcggtc gatcttggcg cctggcgcaa gcagttgttg
     1741 gcgctgaccg aggtcgctga cgatatcttc atcgccgacg agcatgggac catcgttcag
     1801 ggcacgttgc cgcaatcggt cggccaggga tttggctcgg cttacgtgac ctatccgaac
     1861 ggcagtctgg aaaccttcga tccggatggc acgatcaatt cgaatgggag actaccgggt
     1921 gctgacgggg tccaggcgcg gcagttcctg acctatatcg tgcgcccgct ggcgcggccg
     1981 gacggttgga tgatcggcgc atcgtatcgt tcggaaagca tcacgaaact gctgtccggc
     2041 gccactctgg gccaaagcgg cgtcatcgca ctggtcgccc tgaagcgggg cggtctgcag
     2101 gcgatcgccg gaccatccgc tcagttcgcc aatatggact tcgcatcgtc tgaactgatc
     2161 gaacagatgc ggaaaaacga agccgggatc tgggctggcg ttacaccgat cgacgatatc
     2221 ccgcgcactg tcgcttaccg gcatattgcc ggccgcgaca tgagcgtgct ggtcggcgta
     2281 tcgcaggagg cagcgaacga gccggtggcc ggactcgcca ccatggcacg cggacttgcc
     2341 gcggttggct cgctgattgt gttgatcatc gcaggcattt ttgtatggac gatcgctacg
     2401 cttcgcacgg ccaggcaacg tctacgaagc tttgagcgga gcgaactcaa tctcgtcaat
     2461 acgcgccacg aactggcggt tgcgcgagcc cggtcgttgt tgagcgaatc cgaggccggc
     2521 gcgctgatcg gcagcgcgac cggcggagtg gctcgcctcg atgccgcatt aatgttgaca
     2581 ttgtggaatg agcgtttcgc cgaacttgcc ggtgtggcga tggatgaagc tgctgccggc
     2641 aagccggtcg aagatctgtt tcggcgtcag gctgctgccg gattgctcgg tggtgtaatg
     2701 gactctgaag cagcaattgc gacccggctc acggttctgc acagcgaaac cagatcggcc
     2761 gagccgctga cgcaaacggg acccgatggc gagccactca gactgtcagt actgggtgtc
     2821 tacgacgggg gtcgtttact cctgttgacg catgctgacg ggtccgcgga cgccgggacg
     2881 gcagaaaaag cgacggaatg gtgagccagc aacggccggg tgcgatcatt gcggcagtaa
     2941 gcggaccccc gaccggtcca cggagtccag caacgcccgc ccagtacggc cgtttgccgg
     3001 atgcacccaa tcaggcgcca catcgagcaa tggcaacaac acgaacgccc gttcatgagt
     3061 ccttggatgc ggcaggatcg gatcgggcat gtcccggacc agcccatcca cgtcaatcag
     3121 gtccagatcc aacgttcgcg cggcgttcgg ttcactgcgc gagcgaccaa accggatctc
     3181 aattgcttgc agccatgcca gcaaggcttc cggggtaacc gtggtttgtt gtggccgatg
     3241 cagacgcgcc acgccgttga cgtagttcgg ctgatccgag cgcggcaccg gctcggtctc
     3301 gtaccagcgc gacagggaat gcagctgcaa ttccggcagt tccgtcaacg catggacggc
     3361 ttcaacacag gtttgcaacg gtgtcgaacc atcggaacca ggaaggttcg cgccgatcgc
     3421 caccaggatc atggcaagtt gttccgggtc aggtgtttca tctctgcttc atatggtaca
     3481 tcatgacagt tcgaccgtac gttgtccgcg gattagttgg cacgcgcggg cagcatcaat
     3541 aacactcgct tacaaaggtc acatccatgc atttccttcc gactgagcgg accgctctgt
     3601 tcattgatgg cgcgaatctc tattcagcgt cacgcaacct ggggtttgac gtcgattatc
     3661 gcaatttgct ggagtttttc cgcaaaaaga cccacgtcat ccgtgcctac tactactccg
     3721 cggtgttgga gacggaagaa tactcgccac ttaagcccct caccgattgg ctggcgtata
     3781 acggttacac gctggttaca aaaccggcca aagaattcac tgattcgatg ggacgtcgca
     3841 gggtcaaggg caacatggat attgaggtgg cggtggacat gctcgaactc gccccgcggc
     3901 tggatcacgc cgtgttgttc agcggtgact cggattttcg tcgattggtg gaggcgatgc
     3961 agcgacgggg cgtacgggtt tccgttgtgt cctcgatccg ttcaagcccg ccgatggggg
     4021 ccgacgaatt gcgccggcag gcggatcagt tcttggaact ggccgacatc gcacctgagt
     4081 tcacccgccg gcaaaccgag ttacgaccgc ggcccgtctc agcgatgcga cacactcctg
     4141 ccgagccgtt cgccgatccg accgacgccg cgtgagtgga caaccccgat cgccggatcg
     4201 ggattgcggc ctgtgtcccc ggttgaagga gtaccgaacc gccaatcgcg cggcgcatcc
     4261 cgaatggcac aacgcgccgg tctcaagctt tggtgagctc gatgcgcggc tgctggtggt
     4321 tggcctggca ccgggagtcc gcggcgccaa tcgcaccgga cggccgttca caggggattt
     4381 cgcgggcgtg ctgctgtatc agaccttgcc caggttcgat ctggccagtg ggatttatgg
     4441 cgcctcgccg gatgacggac taagtccgcg gtcctgccgc attaccaatg cggttcgctg
     4501 cgtgccaccg ggcaacctgc cgaccaccgc cgaggtcaac gcgtgcaatc cgttcctcgc
     4561 cgacgaaatg gcagcgatgc caggtttacg cgctgtgctg gcccttggcc tggtcgcgca
     4621 caaggcggtg ctgcgtgcca gggggctgcg ggccggtgtg gccgtgttcc gacatggcgc
     4681 aatccacgaa ttgcccgatg gattgttgct ggccgacagt tatcacgtgt cccgattgaa
     4741 cacgaacacc gggcggctga ccgaggccat gttccacgat gccgttggcg cgctggtcgc
     4801 acggatggca ctgcatcagc cggcgaattg aatttggtgt ttaaacctta cggtgtcctg
     4861 gcacgattgt ttgggcatgc gctgaccgac gcaaacctgt accctgggcc gttgtaatcg
     4921 caccggccca tttgcgctct tgttgcggtc ctttgcgcgt tttgcggttt gcttttttag
     4981 tttcaggcga ggaattcctg tgtgacgcgt ggtatcgata ttggccaaag gaaaacgcaa
     5041 aggaccgcaa agagaacgca aagggatact gggtaagatc ttcggacgga acgctgtaat
     5101 ggcaaggaaa gcgcttcctg attcggtcga ttcaaagccc gctgctgtta tcgcaagcga
     5161 aacaatggca tgccgtcacc tatgaatatc gctcctc
//
LOCUS       DATAVD010001820         3255 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1101760, whole genome shotgun sequence.
ACCESSION   DATAVD010001820 DATAVD010000000
VERSION     DATAVD010001820.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3255
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1101760"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1100
                     /locus_tag="VHX39_34755"
     CDS             <1..1100
                     /locus_tag="VHX39_34755"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HEX3996360.1"
                     /translation="LYDQLVKLRHGMAVKLGFSTHTPLAYRRLRRVDYGPDDVARYRE
                     QVVQHVVPLVGRLLEARRAANGWDRLRFWDEALVDPAGNPKPRGDHDELVSAAQVMFD
                     GMDPRLAGFYRVMRDGGFMDLKNRPGKAGGGFCTSFPSAGVPFIFANFNGTHHDVGVF
                     THEMGHAFQNWESRSLDGVDYLWPTMEAAEINSMGLEFLSYPGIGRLVGEDAAERFRR
                     MHLIGALAFLPYGVCVDHFQHEVYARPEASPAERHAMWSRLEKIYMPWTDYGDLAFLT
                     KGGRWQAKPHIYGSPFYYIDYTLAQCCAMQFWVKSRRDYRAAMEAYVGLCARGGSAPF
                     QDLVRSAGLVSPFADGALADVVQEAASVLGV"
     gene            complement(1206..2021)
                     /locus_tag="VHX39_34760"
     CDS             complement(1206..2021)
                     /locus_tag="VHX39_34760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEX3996361.1"
                     /translation="MNIRPQHRADPQPAKKPPRIRQVPALTRGIAILRLLGRSDEPLG
                     VHAIARALDLVPSTCLHILRVLADENLVAVDPATKKYGVAAGLVALARSALRQHTFPV
                     IVQPELDELAQRYGATAIGVEASGLEHMIVVAMARSDSPLRVHVDIGSRFPALISATG
                     RCVAAFGTHPRAEIEARFVKLRWDDPPTLTTWRKEVRAAQTAGYAVDDGQYIRGVSIV
                     AAPVRMPNGSINALVVVGVSEQMRRVGLTTIGEDLHARAVQVSRTLGGETLAG"
     gene            2152..>3255
                     /locus_tag="VHX39_34765"
     CDS             2152..>3255
                     /locus_tag="VHX39_34765"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3996362.1"
                     /translation="MKTSGVITRRGVLGAAAAGALARPGLLRAQTVSAPVRIGLLSDV
                     AGPYRNVGGPGAKVAVELAVEDFGDSLLGRHIEVVQSDIQNKPDISSAKAREWIDDGF
                     NVLVDGGATSSGLAVQQVAREKKTIYLGNGPSASDFTGKFCSPYGFRFWGDTYSLSKG
                     TSTALTKAGGDTWFFITADYTFGYSLQANATHFIEGAGGKVLGDAKVPLGTTDFSSAM
                     VRARASGAKVVGFANAGADLQNCVKQASEFGIVQGGQSLATLLMFVTDIVALGQDVCK
                     GLVLTNSFYWDRTPKTRAWTERFAKKMNLPPTMTQAADYSAAMHWMRSVKAAGTLDAD
                     TVAAKMRAMPVNDFYHDNVPVQANGQVLDPMLVW"
BASE COUNT          533 a          866 c         1207 g          649 t
ORIGIN      
        1 cgctgtacga ccagcttgtg aagctgcgcc atggcatggc ggtcaagctg gggttttcga
       61 cccacacgcc gctggcctac cggcggttgc gacgggtcga ttacggccct gacgacgtcg
      121 cccgctaccg cgaacaggtg gttcagcatg tcgtgcccct ggtcgggcgg ttgctggagg
      181 cccgacgggc ggcgaatggc tgggaccggc tgcggttttg ggatgaggca ctggtcgatc
      241 cggccggtaa tccgaagccg aggggcgatc acgacgaact ggtgagcgcg gcgcaggtga
      301 tgtttgacgg gatggacccc aggctggccg ggttttaccg ggtgatgcgg gacggcgggt
      361 tcatggattt gaagaaccgg ccggggaagg ctggcggcgg attttgcacc tcgtttccct
      421 cggccggggt gccgttcatc ttcgccaact tcaacggcac gcatcacgat gtcggcgtgt
      481 tcacgcatga gatggggcat gcgttccaga actgggaaag ccgttcgttg gacggcgtgg
      541 actatctgtg gccgacgatg gaggcggcgg agatcaactc gatggggctg gaattcctgt
      601 cctatcctgg catcgggcgg ctcgtcgggg aggatgcggc cgaacggttc cggcggatgc
      661 acctgatcgg ggcgttggcg ttcctgcctt atggggtctg cgtcgatcac ttccagcatg
      721 aggtttatgc tcggcccgag gcgtcgccgg cggagcggca tgcgatgtgg tcccggctgg
      781 agaagatcta catgccgtgg acggattatg gcgacctggc gttcctgacc aagggcggac
      841 gctggcaagc caagccgcat atctacgggt ctccgttcta ctatatcgac tacacgctgg
      901 cgcagtgctg cgcgatgcag ttctgggtga agtcccggcg ggattatcgc gcggcgatgg
      961 aggcctatgt cgggctttgc gcgcgtggtg ggtcggcgcc gtttcaggac ctggtgcggt
     1021 cggcggggct ggtgtcccca ttcgcggatg gggcgctggc ggatgtcgtg caggaggcgg
     1081 cctcggttct gggggtctag tatcgcgcgt cagggaagcg cgatacgtcg caggtttgtt
     1141 tgagtgaccg attcaggcgg gaaatcgccg tcactgcgtg agtcccgcct taccgcgatc
     1201 gggcactagc cggccaaggt ttcgccgccc aatgtccggg agacctggac ggcgcgggcg
     1261 tgcaggtcct cgccgatcgt tgtcaggccg acgcggcgca tctgctcact gacgccgacg
     1321 acgaccaggg cgttgatcga accgttgggc atgcggaccg gtgcggcgac gatactgacg
     1381 ccgcggatgt actggccgtc gtccacggcg taaccggcgg tctgggcggc gcggacttcc
     1441 ttgcgccagg tcgtcagggt tggcggatcg tcccagcgca gtttgacgaa gcgggcctcg
     1501 atttcggccc gcgggtgggt gccgaacgcg gcgacgcagc ggccggtggc gctgatcaga
     1561 gccggaaagc ggctgccgat atcgacatgg acgcgtaacg gtgagtcgga gcgcgccatg
     1621 gcgacgacga tcatgtgttc caggccgctt gcttcgacac cgatcgccgt ggcgccatat
     1681 cgttgcgcca gttcatccag ttccggctgc acgatcaccg ggaaggtgtg ctggcgcagg
     1741 gcggaacgag ccagggcgac gaggccggcg gcgacgccgt atttcttcgt tgcgggatcg
     1801 accgccacca ggttttcgtc ggccagcacg cgcaggatgt gcaggcacgt gctggggacg
     1861 agatcgagcg cccgggcgat cgcgtgaaca ccaagcggtt cgtcggagcg gccgagcagg
     1921 cggaggatgg cgatgccgcg ggtgagtgcg ggaacctgcc tgatcctggg gggctttttc
     1981 gctggctgcg ggtcggcgcg gtgttgtggg cgtatgttca tattgtcttc atacaacggt
     2041 ccccggaggg caggatagtt cgatattgtt gtctgtggac aatatgtgcg ccatcttgac
     2101 aacatggatc gtggacgctc tgctgtggtg atcgagggag cgttgcagac aatgaaaaca
     2161 tccggagtga tcactcgcag aggggtattg ggtgcggcag cggcaggtgc gctggcgcgt
     2221 cctggattgt tgcgggcgca gacggtgtcc gccccggttc ggatcgggct gttgagcgat
     2281 gttgccggac cgtatcgcaa tgttggcgga ccgggcgcga aggtggctgt cgaactcgct
     2341 gtcgaggatt ttggcgacag cctgcttggg cgccacatcg aagtggtgca gtccgatatt
     2401 cagaacaagc cggatatctc cagcgccaag gcgcgggaat ggattgacga cggcttcaat
     2461 gtgctggtcg atggcggggc cacgtcgtcc gggctggcgg tgcagcaggt cgccagggag
     2521 aagaagacga tctatttggg taatggaccg tcggcgagcg attttaccgg gaagttctgt
     2581 tctccgtacg ggttccggtt ttggggtgat acgtattcgt tgtcgaaggg aaccagcacc
     2641 gcgctgacca aggccggtgg cgacacctgg ttcttcatca cggcggatta cacgttcggt
     2701 tattctctgc aggcgaacgc gacgcatttc atcgagggcg cgggcggaaa agtgctgggg
     2761 gatgccaagg tgccgttggg cacgacggat ttctccagcg ccatggtgcg ggcgcgggcg
     2821 tccggcgcga aggtcgtcgg cttcgccaac gcgggtgcgg atttgcagaa ctgtgtcaag
     2881 caggcgtcgg agttcgggat tgtccagggt ggccaaagtt tggcgacgtt gctgatgttc
     2941 gtgaccgata tcgtcgcgtt gggacaggat gtttgcaagg ggctggtgct gacgaattcg
     3001 ttttactggg accggactcc aaagacacgg gcatggaccg agaggttcgc gaagaaaatg
     3061 aatttgccgc cgaccatgac gcaggctgcc gattattccg ccgcgatgca ttggatgcgg
     3121 tcggtgaagg cagccggcac gctggatgcg gataccgtgg cggcgaagat gcgggcgatg
     3181 ccagtgaacg atttctacca cgacaatgtt ccggtgcagg ccaatggcca ggtgctggac
     3241 ccgatgcttg tgtgg
//
LOCUS       DATAVD010001821         2165 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2405370, whole genome shotgun sequence.
ACCESSION   DATAVD010001821 DATAVD010000000
VERSION     DATAVD010001821.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2165
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2405370"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..646)
                     /locus_tag="VHX39_34770"
     CDS             complement(158..646)
                     /locus_tag="VHX39_34770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEX3996363.1"
                     /translation="MSATFRKICFTLNGTAVDVTVATHESLVEVLRDRFDLFGVRESC
                     GQGLCGCCTVLLDGQAVSSCLYLAVFADGAELVTVEGLAHDGQLDPVQQAFIAAGAFQ
                     CGFCTPGFILMTKQLLDANPSPDDAEIRHYLAGNLCRCGTYPQIIAAVKLAARNRASG
                     AA"
     gene            complement(648..>2165)
                     /locus_tag="VHX39_34775"
     CDS             complement(648..>2165)
                     /locus_tag="VHX39_34775"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX3996364.1"
                     /translation="KVYVKLEALAVALSLLAARPVKLALTMSEQFFTISKHASTFLIK
                     SAVTKEGRITARRCEVFYNGGAYADIGPRVAQKSGFSAAGPYDIANVEIDSYELYTNR
                     PPAGALRGFGVPQLVWAYESHTDLIARGLGLDPVAFRHANLLRDGVPHATGTVMRDAG
                     LAAVLDRIVARIDWGQAFDRGPEDQGEGTIKRGRGIAIGIKASISPTTSVAHLAIAAD
                     GSATLYCSTVDMGQGSTTAMAQIAAEVLGVAAELVNVVAPDTDVTPYDMGTLGSRSTF
                     HMGHAVRLAAEDARAKLASLAAEAGVPEGSNLSIPEIFRRRYGMQAGTIIGSGSFIPS
                     YVAPDLTTGLTPDATPFWMIGGSGAEVEVDTETGAVRVLRLVTVADAGTPVNPSIVET
                     QISGAAVMQLGFTLLEAMEFTEGQLRNPSLADYRIPGIRDLPSRFEAEALDATQASGP
                     FGAKGVGESGTFGVSPAIANAIEDAVGVRITELPITAEAVYRALRRAAGDNLAGE"
BASE COUNT          426 a          688 c          658 g          393 t
ORIGIN      
        1 ccgccggtta cgattgcgcc aacgctcgtg tcggtcatgt tggtttctcc cgaggcgctg
       61 cggaatttgc gaacgcttcc gggtcaccat cctaccgcgt cagcgatggt gcaacctggt
      121 tttgccgggc gccgtacgac gcaagctgcc gccaggttca ggccgcgccg gacgcccggt
      181 tgcgcgcggc aagtttcacc gccgcaataa tttgcggata ggtcccgcag cgacacaggt
      241 tgccggccaa ataatgccgg atttcggcgt cgtccggcga tggattggca tcgagcaatt
      301 gcttcgtcat caggatgaaa cccggcgtac agaagccgca ctggaacgcc cctgctgcaa
      361 tgaacgcctg ctgcaccgga tcgagctgac cgtcgtgtgc cagaccctca accgtcacca
      421 gttcggcgcc atccgcgaaa actgcgaggt aaagacagga cgataccgcc tggccatcaa
      481 gcaggacggt acaacagccg cacaaaccct gaccgcagct ttcgcgcaca ccgaacagat
      541 caaacctgtc acgcagcacc tcgacgagac tttcgtgcgt cgccacggta acatcgaccg
      601 cagtgccatt cagcgtgaaa caaatttttc gaaatgtggc gctcatgtca ttctcccgcc
      661 aggttatcgc cggcggcgcg acgcagggcg cggtaaaccg cctcggcggt gatcggcaat
      721 tcggtgatgc gcacgccgac tgcgtcctcg attgcattgg cgattgccgg cgatacgccg
      781 aatgtaccgc tctcgccgac gcccttcgca ccaaatggac cactggcttg ggtggcgtcc
      841 aacgcctcgg cctcaaaccg tgacggcaaa tcgcggattc cggggatccg gtaatcggca
      901 agcgatggat tgcgcaattg gccctcggtg aattccatgg cttcgagcaa agtgaaacca
      961 agttgcatga cggccgcacc ggagatctgg gtttcgacga tcgaaggatt aaccggcgtg
     1021 ccggcatcgg cgaccgtcac cagtcgaagg acccgcaccg caccggtctc ggtgtcgacc
     1081 tcgacctcgg cgccactgcc gccaatcatc caaaatggtg ttgcgtcagg ggtcaggccg
     1141 gttgtcaggt ccggcgcaac atagctcggg atgaaactgc cgctgccaat gatcgtgccg
     1201 gcctgcatac cgtaacggcg gcgaaagatt tccgggatgg aaagattgct gccctccggc
     1261 acgcccgcct cggcggcgag tgaagcgagt ttcgctcgtg catcctcggc cgccagccgc
     1321 actgcgtgcc ccatgtggaa cgtcgagcgc gagccaagcg ttcccatgtc gtacggcgtc
     1381 acgtcggtat cgggtgccac gacattcacc aactcggcgg cgactcccag tacctcggcg
     1441 gcgatctggg ccattgcggt ggtcgagccc tgacccatgt cgaccgtgct gcaatacaaa
     1501 gtcgcgctgc cgtcggcggc gatcgccaaa tgagcaaccg aggtggtggg cgaaatactg
     1561 gccttgatgc cgatcgcgat gccgcggcca cgtttgatcg tgccctcgcc ttgatcttcc
     1621 ggaccgcgat cgaaggcctg accccagtcg atccgggcga cgatccgatc cagcaccgcg
     1681 gccaggccgg cgtcgcgcat gactgtgccg gtcgcatgcg gtacgccgtc gcgcagcaga
     1741 ttggcgtggc ggaatgcaac cgggtccagg ccgagaccgc gtgcgatcag gtcggtgtgg
     1801 ctttcataag cccaaacaag ttgcggcacg ccaaatccac gcaaagcgcc ggccggtggg
     1861 cgatttgtgt aaagctcata ggaatcgatc tcgacattgg cgatgtcgta cggaccagcg
     1921 gcactgaagc cggatttctg ggcgacacgc gggccgatat cggcataggc gccgccattg
     1981 taaaatacct cgcagcgccg cgcggtaatt cgaccctctt tggtcaccgc actcttgatt
     2041 aggaacgtgc tggcgtgttt cgagatggta aaaaattgct ccgacatggt cagcgccagt
     2101 ttcaccggcc gcgcggcaag caaggagagc gcgaccgcca acgcttccag cttgacgtag
     2161 acctt
//
LOCUS       DATAVD010001822         2179 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3331908, whole genome shotgun sequence.
ACCESSION   DATAVD010001822 DATAVD010000000
VERSION     DATAVD010001822.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3331908"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..240
                     /locus_tag="VHX39_34780"
     CDS             <1..240
                     /locus_tag="VHX39_34780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004717067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEX3996365.1"
                     /translation="LISWIILGLIAGYIAHRIMGQRGQGFFMNTVLGVVGAVVGGEIM
                     TLLGRHEVNGLNIYSMAIAVAGAIVVLVVVQLARR"
     gene            complement(242..>2179)
                     /locus_tag="VHX39_34785"
     CDS             complement(242..>2179)
                     /locus_tag="VHX39_34785"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX3996366.1"
                     /translation="MIDYDELPLVTDPIAAMESGAPVVWDEYPDNIGYLWKRGDAEAA
                     AANLAAAAHVTKLEFSVSRVTANSMEPRGAWAEIGPDGRMVVHASNQSPFNLRNGMAN
                     GNFGIPPTDIRVLPGDVGGSFGMKSGVHVEVVLVAWAARKLNRPVRWISERTEGFLTD
                     EQAREMRIVAELGLDANNKITALKLRWNANLGAYCSGRSGWPVGNVGGIAGTYVIPAI
                     SAEVCGIMTHTVPTAAYRGAGRPEATYAIERLLDVAARERGISPYELRRINLIPSESM
                     PYKTALTFTYDCGEFEGNMIKAAELAELETFDARRSEAESRGKLRGIGLTNCIEVAGG
                     PFLRPAKDLSTLRFAEDGKLILRTGSMSVGQGLETAFCQIVSERFGVPLENVLYEHGD
                     TDQLPFGKGNGGSGALCIGGSAVTIAIDKVIERAKKIAAELLEASVTDIELREGRFHI
                     AGTDRSIDVASIGRASFGPNFVPPGEEGGLTESGEFQATACTFPNGTHICEVEIDPDT
                     GVTEVVRYSAVEELGKVLNPMIVAGQIHGGVVQGIGQAMGEVIVHDPDSGQMLTASFM
                     DYQMPRAGDLPDFRLATREVPTKVNPIGAKGVGEAGTVGAMAAAMNAVNDALASLGIR
                     HFDMPATPGRVWEAISAARSK"
BASE COUNT          408 a          683 c          655 g          433 t
ORIGIN      
        1 cttatcagtt ggatcattct cggcctgatc gccggataca tcgcgcaccg gatcatgggg
       61 caacgcggcc aagggttttt catgaacacc gtgttgggcg ttgtcggcgc ggtggtcggc
      121 ggcgagatca tgaccctgct cgggcggcat gaagtcaacg ggctcaacat ctacagcatg
      181 gcgattgcgg tcgcgggcgc catcgtcgtg ctggtcgtgg tgcaactcgc acgaagatag
      241 tctatttcga tcgggcggcg ctgatcgctt cccacacgcg tcccggcgtc gctggcatgt
      301 cgaagtgtcg aatacccagt gaggccagag cgtcgttgac ggcgttcatg gcagcagcca
      361 tggcgccgac cgtgccggcc tcgccaacac cttttgcacc gatcggattg actttggtcg
      421 gcacctcgcg cgtcgcgagc cggaagtccg gcaagtcgcc cgcccgcggc atctggtaat
      481 ccataaacga tgccgtcagc atctggccgg aatcgggatc gtgcacgatg acctcgccca
      541 tcgcctgacc gatgccctgc accacgccgc catggatctg gccggcgaca atcatcgggt
      601 tgagtacttt gccaagttct tcaacggcgg aatagcgcac aacctcggtc acgccggtgt
      661 cgggatcgat ctccacctcg caaatatgcg tgccgttcgg gaatgtgcat gcggtcgcct
      721 ggaactctcc gctttcggtc agaccgccct cctcgcccgg tggcacgaag ttcgggccga
      781 acgaggcgcg gccgatgctg gcgacatcga tcgaacggtc ggtgccggca atatgaaagc
      841 ggccctcgcg gagttctatg tcagtcactg acgcttccag caattcagcg gcaattttct
      901 tggcccgctc gatcaccttg tcgatcgcga tcgttacagc agagccgccg atgcataatg
      961 cgccggagcc accgttgcct ttcccgaacg gcagctggtc ggtgtcgccg tgttcgtaaa
     1021 gcacgttctc cagcggcacg ccgaagcgct ctgagacgat ctgacagaat gccgtctcca
     1081 gaccttggcc aaccgacatc gatccggtac gcaggatcag cttaccgtcc tctgcaaacc
     1141 tcaatgtcga aagatccttc gccggacgta agaacggccc gccggcaacc tcgatgcaat
     1201 tggtcagtcc gataccacgc agcttgccac gggactccgc ttcgcttcgc cgtgcgtcga
     1261 aagtctccag ttccgccagt tcggcggcct tgatcatgtt accctcgaac tcgccacagt
     1321 catacgtgaa cgtcagcgcg gtcttgtaag gcatcgattc cgacgggatg aggttgatcc
     1381 tgcgcagttc gtacggtgag attccgcgtt cgcgagccgc aacgtcgagc agacgttcga
     1441 tggcataggt cgcctccgga cgtccggcgc cgcgataggc agcggtcggc acggtatggg
     1501 tcatgatgcc gcaaacctca gccgaaattg ccgggatgac atacgtgccg gcgatcccgc
     1561 cgacgttgcc gaccggccaa ccggaacggc ccgagcaata cgcgcccaaa ttggcgttcc
     1621 agcgcaattt cagcgccgtg atcttgttgt ttgcatcgag gccgagttcg gcgacaatgc
     1681 gcatctcccg cgcctgctcg tcggtgagaa atccttcggt gcgttcgctg atccaacgca
     1741 ccggacggtt cagttttcgt gccgcccatg caacgaggac gacctcgacg tggacgccgg
     1801 acttcatgcc gaaggagcca ccgacatcgc cgggcagcac tcggatgtcg gtgggtggaa
     1861 tgccgaagtt gccattcgcc ataccattac gcagattaaa cggagattga ttggacgcgt
     1921 gcacgaccat gcgtccatcg gggccaatct ccgcccaggc accacggggt tccatggagt
     1981 tggcggtgac gcgggaaacg gagaattcca acttcgttac gtgtgcggcg gcggccagat
     2041 ttgccgcggc tgcctcggcg tcgccgcgct tccaaagata gccgatgttg tcgggatatt
     2101 cgtcccacac taccggcgca ccggattcca tggcggcgat cgggtcagtg accaaaggca
     2161 gttcatcgta gtcgatcat
//
LOCUS       DATAVD010001823         2968 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_357146, whole genome shotgun sequence.
ACCESSION   DATAVD010001823 DATAVD010000000
VERSION     DATAVD010001823.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2968
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357146"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(188..568)
                     /locus_tag="VHX39_34790"
     CDS             complement(188..568)
                     /locus_tag="VHX39_34790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996367.1"
                     /translation="MSMPGVLDSPCVLTFAVTASRPMEHFQVMTADQATHMDARTAVS
                     TAKAHVEELFGSEGVFNLGLEEIEFDETNDRWFVTVGFSRSWDKKQGVMADLSPAERT
                     YKVVMIDKDGRVRSVKNRETASAG"
     gene            714..1385
                     /locus_tag="VHX39_34795"
     CDS             714..1385
                     /locus_tag="VHX39_34795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996368.1"
                     /translation="MPLLGTAVLAVWNEVDPAIEPDFNDWYLREHIPERLAVPGMNRG
                     RRYCADAGSPRYMAFYEAASMDVLTQGPYREQLDHPTEWTQRIMPHFRFAQRGLCDVA
                     ASLGDGIGSAAAVIHLTPTDAPQLRAWIAETLLPELCARRNVVAAHLWTLTPGEPASQ
                     TTALSRQAEPEHPLAWVVVAETADPATADAMAATILMRDPKAHGAAEIVACPTYRLLY
                     AVDPR"
     gene            complement(1364..2308)
                     /locus_tag="VHX39_34800"
     CDS             complement(1364..2308)
                     /locus_tag="VHX39_34800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HEX3996369.1"
                     /translation="MGDPFDLIAGWLHEHLIIPTLYALGLMRWEELAAGWVLFAVYGA
                     VQVALTLAICMPLERWRPIERWQDNKAVGVDIFYTVLSRVGVLPLVTFVLFYQVQVAL
                     NGWLTDHGWIPPMLERVFPALLGHAVLTFVIYAIILDFADYWRHRVSHMIRWWWALHS
                     VHHAQRQMTFWSDDRNHVLDDFIAFVWFGVIALAIGVPPMQFPLLVLVLRFVESLSHA
                     NARVSFGVVGERLLVSPRFHRAHHGVLAFGRRSCNYGAVLPWWDMLFGTADFTSEFVP
                     TGDPSGDEALATGSWFAQQWSGLRRLWRALGFQRGSTA"
     gene            complement(2342..>2968)
                     /locus_tag="VHX39_34805"
     CDS             complement(2342..>2968)
                     /locus_tag="VHX39_34805"
                     /inference="COORDINATES: protein motif:HMM:NF044870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HEX3996370.1"
                     /translation="FLVINGLARNQVDIYDPETMNLIKRFPAETMPSHMAFDPDGHRV
                     FVSLQGSDKLAAFDLTTMTALWTEPVGPTPAGVLWLNGRILVADMGDDYVAAVDPENG
                     HVTDKIVTGKGAHNLFLSPDEKILWVNNRAGGTTTALDAETLRVLKSFNIPGGPDDIA
                     FAPDGDLWITRRFAEKIAILHPETGDFETIDVGRSPHGIWLNPTAPSP"
BASE COUNT          631 a          992 c          817 g          528 t
ORIGIN      
        1 aagattggat gtcccggtca ccgtgtttgg tgttgccacg atgcctgaag cattcgccag
       61 aacgctcatc agcaaatgga aatcccgttc cgtatatgct tgaagccgct tatgtcgggc
      121 gatatgggca ggtgacgtta cgccaacgac gaacagaacc aggaggttgc tatcgaggac
      181 gatagtctca cccggcactc gcggtttccc ggtttttcac cgaccgcact cgtccgtcct
      241 tgtcaatcat gacgaccttg taggttcttt cggcgggaga caggtcggcc ataacaccct
      301 gcttcttatc ccaggaacgc gaaaacccga cggtgacgaa ccaccgatca ttggtttcat
      361 cgaattcgat ctcttcaagg ccgagattaa acacgccttc gctcccaaac agctcctcca
      421 cgtgcgcctt cgcggtgcta accgcggttc tcgcgtccat atgcgtagcc tgatcagcgg
      481 tcattacctg gaagtgctcc atcgggcgcg atgccgtcac cgcaaaggtg aggacgcacg
      541 gggaatctaa cacgcccggc atcgacattc aaacacgcca tcgacccaac ggacgtctgc
      601 cgggtcatca actttgcgtc ggttctggtt ccaactatcg tgctggcgga tcaggctgac
      661 gccacggcgg cggtcagttt ctcgaaccgt gcgcaaccag aaagacccac cgcatgcccc
      721 tcctcggcac cgccgttctc gccgtctgga acgaggtcga tccggctatc gagccggact
      781 tcaacgactg gtatctgcgc gagcacattc ccgaacgcct cgcggtgcca ggcatgaatc
      841 gcggccgccg ttattgcgct gacgcaggct cgccacgcta catggcgttc tacgaggcgg
      901 cgtcgatgga cgtcctgacc caaggcccgt atcgcgagca gctcgatcat ccgaccgaat
      961 ggacgcagcg gatcatgccg cattttcgct tcgcgcaacg cggcctgtgc gacgtcgccg
     1021 cttcattggg cgacggcatt ggcagcgctg ccgctgtcat ccatctgacc ccgactgacg
     1081 cgccacaact gcgcgcctgg atcgctgaga cattattgcc cgaactatgt gcccgccgga
     1141 acgtcgtcgc tgcgcattta tggaccctga cgcccggcga acccgccagt caaacgacag
     1201 cgctcagccg ccaggccgaa cccgagcatc cgctcgcctg ggttgtcgtc gccgagaccg
     1261 ctgatccggc aaccgctgac gccatggccg ctaccatcct gatgcgcgac cctaaggcgc
     1321 atggtgccgc cgaaatcgtt gcctgtccga cgtatcgctt gctctacgca gtcgatccgc
     1381 gctgaaagcc cagagcgcgc cacaaccggc gcagtcccga ccattgttgg gcgaaccagg
     1441 agccggtggc cagtgcctcg tcgccgctcg gatcccccgt cggcacgaac tcggatgtga
     1501 agtccgctgt gccgaacagc atgtcccacc acggcagcac ggccccgtaa ttgcagctgc
     1561 gccggccgaa cgccaacacg ccgtgatgcg cccgatgaaa ccgcggcgag accaacaaac
     1621 gttcgccgac gacaccgaac gacaccctcg cattggcgtg cgacaggctc tcgacgaagc
     1681 gcagcaccag caccagcaac ggaaattgca tcggcggcac accgatcgcc agagcgatca
     1741 caccaaacca cacaaacgca atgaaatcat ccagcacgtg attgcggtca tccgaccaga
     1801 acgtcatttg gcgttgcgcg tgatgcaccg aatgcagcgc ccaccaccag cggatcatat
     1861 gcgacacgcg atgccgccaa tagtcggcaa agtccaaaat gatggcatag atcacaaacg
     1921 tcagcaccgc atggccgagc aatgccggaa acacccgttc cagcatcggc gggatccacc
     1981 cgtgatcggt gagccagccg ttcaacgcca cctgcacctg atagaacagc acgaacgtca
     2041 ccagcggcag cacaccgacc cgcgacagca ccgtgtaaaa gatgtcgacc ccgacagctt
     2101 tgttgtcctg ccaccgctca atcggccgcc agcgttccaa cggcatgcag atcgccaatg
     2161 tcagggccac ctgcacagcg ccatagaccg caaacaacac ccagccggct gcaagttcct
     2221 cccagcgcat caggcccaat gcatagagcg tcgggatgat cagatgctcg tgcagccagc
     2281 cggcaatcag gtcgaacgga tcacccaatc gggtcctcca tttaaatcac ggaccggtaa
     2341 ctcaaggact gggcgccgtc gggttgagcc aaatcccgtg cggcgagcgt ccgacatcga
     2401 tggtttcgaa atcgccggtc tcgggatgca ggatggcaat cttctcggca aagcggcggg
     2461 tgatccacag atcgccgtcg ggcgcgaaag cgatgtcgtc cggcccgccc gggatgttga
     2521 aactcttaag cacgcgcaac gtttcggcat cgagtgccgt ggtggtgccg ccggcgcgat
     2581 tgttcaccca aaggattttc tcatccggcg agagaaacaa attgtgtgcc cccttgccgg
     2641 tgacgatctt gtccgtcacg tggccgtttt ccggatcgac cgccgcgaca taatcgtcgc
     2701 ccatatcggc gaccaggatc ctgccattca gccacagcac gccggcagga gtggggccaa
     2761 ccggctcggt ccacaacgcc gtcattgtcg tcaggtcgaa cgccgccagc ttatcgctac
     2821 cctgtaacga aacgaacacc cggtgcccgt ccgggtcgaa cgccatatga ctgggcattg
     2881 tctccgccgg gaagcgtttg atcaggttca tcgtctccgg gtcgtaaata tcgacctgat
     2941 tgcgcgccaa tccgttgatc accagaaa
//
LOCUS       DATAVD010001824         6361 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1660560, whole genome shotgun sequence.
ACCESSION   DATAVD010001824 DATAVD010000000
VERSION     DATAVD010001824.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6361
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1660560"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            241..981
                     /locus_tag="VHX39_34810"
     CDS             241..981
                     /locus_tag="VHX39_34810"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3996371.1"
                     /translation="MSGFVGKRILITGGAGGIGVETARAFMDQGAHVLLVDIDEERLL
                     QAHTVLGRVRVALLQSALDTPAACAAAIDAAGGPVYALVHLAGLFEKDAMNADDHAVW
                     DRAIGINLTSAYDMAVAFAAHVGAGISDQDKARIVLTSSVAYRRGSAGYPPYAAAKAG
                     IVGLTRSLSRRLGPGVLVNAVAPGLIDTRMAVTTIAERGEAYLREIPLQRVGQPSEVA
                     TVIRFLCSADASYVTGQTITIDGGITNA"
     gene            complement(1027..1581)
                     /locus_tag="VHX39_34815"
     CDS             complement(1027..1581)
                     /locus_tag="VHX39_34815"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEX3996372.1"
                     /translation="MSVAVQLPMTLAEFLAWEERQELRYEFDGFEPIAMTGGTIAHDQ
                     ITFELRRALAVRLAGKRCRPLGPNVKIIVDGRTRYPDAFVVCQPVSPTATVADDPVVV
                     FEVLSEGSAETDLIDKNREYRATASIQRYVVLQQTHKAAVVFERQGHGWLSEIISGDN
                     AILDLPEIEISLPLHEVYANSGLT"
     gene            1837..3234
                     /gene="radA"
                     /locus_tag="VHX39_34820"
     CDS             1837..3234
                     /gene="radA"
                     /locus_tag="VHX39_34820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEX3996373.1"
                     /translation="MAKPTTRFVCQSCGAVTPKWAGRCETCGEWNTVEPETITPRPGP
                     GAKAPAGQSVSFVGLRGDAAPPPRAATGIEELDRVLGGGLVPSSAVLVGGDPGIGKST
                     LLLQVAARLAAAGKRVLYITGEEAIEQVRLRARRLGVADTAIELAASINVRDITASLE
                     RAKDATLVVIDSIQTMWLDAIDSAPGTVSQVRACSFELIRAAKASNFTLVLVGHVTKE
                     GGIAGPRVLEHMVDAVLYFEGDRGHQFRILRAVKNRYGATDEIGVFEMTDVGLAEVAN
                     PSALFLAERRGNIAGSAVFAGLEGTRPVLLEIQALLAPNPGGSPRRSVIGWDGSRLSM
                     LLAVLETRAGVRLNMTDVWLNVAGGLRVNEPAADLAVAAAIASAAFDKPTAPGAVWFG
                     EIGLSGEIRQVAQADARLKEAAKLGFDSACLPRRVAHGNRRLSAPDGLMLQEIGHIAD
                     LVARFAPEPTTREHS"
     gene            3308..3886
                     /locus_tag="VHX39_34825"
     CDS             3308..3886
                     /locus_tag="VHX39_34825"
                     /inference="COORDINATES: protein motif:HMM:NF014704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEX3996374.1"
                     /translation="MTSVDLAVLGVMILSGLLAFFRGLIREVLSIGAWAGAAVIAMVG
                     LPFIRPWLEPYVPSSEWTDPAGYIILFLISLIILSVVAKAIGGAVRASVLSGVDRSLG
                     LLFGLARGAVLAVAVYIVACLAIPPDRWPEPVLESRSLPYIYSGAVWAARQFPQEYRP
                     QVLAPPPARQTALGGLMKASPIGRASDPPLSK"
     gene            3902..5377
                     /gene="purF"
                     /locus_tag="VHX39_34830"
     CDS             3902..5377
                     /gene="purF"
                     /locus_tag="VHX39_34830"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEX3996375.1"
                     /translation="MADEIPEVAGPDDDSLHEECGVFGVWNVPDAAAVTALGLHALQH
                     RGQESAGIVSFDGVKFHSHRGLGSVGDNFGDQKVIDGLPGRTAIGHNRYATTGETILR
                     NVQPLYADFEFGGFAVAHNGNLTNAHVLRRALVRRGCLFQSTTDSEVFIQLIAISLYS
                     TVVDRLIDALKQVIGAYSLVALSNEAMMGIRDPMGVRPLILGRIGSEGTGGWVLASET
                     CALDIVNADFVRDVEPGEIVVITDQGVHSIRPFARTPERFCVFEYIYFARPSSLMEGT
                     SVYEARKRIGRELAIESPVDADLVVPVPDSGLPSAMGFSRESGIPLELGIIRNQYIGR
                     TFIEPSDHIRHLGVKLKHSANRPILKDKRVILVDDSIVRGTTSKKIVEMVRAAGAREV
                     HMRISSPPTTHSCFYGIDTPERSQLLAASHSVEQMAKLIGADSLAFVSIDGLYRALGK
                     VGRDPDQPFYCDACLTGDYPIALPDQADNADRQLSLLAEIR"
     gene            5389..6096
                     /locus_tag="VHX39_34835"
     CDS             5389..6096
                     /locus_tag="VHX39_34835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3996376.1"
                     /translation="MPGVLAGRVALITGASRGLGAAVAVELGRLGAHVVITARTQGGL
                     EETDDAVRAVGGTATLLPLDLREPDKIEAIAGSIFSRFSRLDILVHAAGVLGKLTPVS
                     HALPQDRDEVLAVNTLAAWRLIQGCEGVLRQSDAGRAVFVTDVRAREPLAYWGPYGAS
                     KAAAANLVLTWAGEVAFTQLRVNLFDPGPMRTRLRAAAFPGEDPAGVPLPDGAAAVLM
                     TLCLPGETRHGEVVRYP"
BASE COUNT         1082 a         1927 c         2087 g         1265 t
ORIGIN      
        1 tgcaatctgt ccattggttg gggaatggga gagggccaac cgtggcgctt atcaaagtct
       61 gtgtcggccc tctctcattt cccaaccaaa atgaatggtt ccaagggccg ctgcccttgg
      121 cggagatcca ggaggcaaag cctcttggtg gggttcgggg caaagccccg ccgcttcctc
      181 agttccggcg atcgccgtag gctgaccgcc agatcgtcgt atcgcaaaag ggaggcgacc
      241 atgtccggtt tcgtcggcaa acggatcctg atcaccgggg gcgccggtgg tatcggtgtc
      301 gaaacggctc gcgcgttcat ggatcaaggc gctcatgtcc ttctggtcga cattgatgag
      361 gagaggttgc tgcaagccca taccgtactg ggccgcgttc gggtcgctct gttgcagtcg
      421 gcgttggaca ccccagccgc gtgcgcggcg gcaatcgatg cggcaggtgg gccggtttac
      481 gcgttggttc acctcgccgg tttgttcgaa aaggatgcga tgaacgccga cgaccatgcg
      541 gtgtgggacc gcgcgatcgg catcaacctc acgagtgcct acgacatggc agtggcgttc
      601 gctgcccatg tcggcgcggg catatcggat caggacaaag cgcggattgt gctgaccagt
      661 tcggtggcgt atcgtcgagg cagtgccggc tacccgccct atgctgcggc gaaggcggga
      721 attgtcgggt tgacccggtc gttgtcgcgc cgtctcgggc ctggcgtgct ggtgaacgcc
      781 gtcgcccccg ggttgatcga caccagaatg gccgtgacga cgatcgccga acgcggtgag
      841 gcttatctcc gggaaatccc actgcaacgt gtcggccagc catccgaggt ggcgacggtc
      901 attcggttcc tgtgttcggc cgatgcgtcg tacgtgaccg ggcagaccat tacaatcgac
      961 ggcggcatta ccaacgcgta acggacgctt tacgcaatat ctgcaatgtc gcgaaattcg
     1021 ttgcggctac gtcaggccgg agttcgcgta gacctcgtga agaggcaggg aaatctcgat
     1081 ttccggcagg tccagaatgg cattgtcacc cgatatgatt tcggacaacc acccgtggcc
     1141 ttgccgctcg aagacgaccg ctgctttgtg cgtctgctgc aaaacaacat agcgttggat
     1201 cgaagcggtg gcgcgatatt cgcgattctt gtcgatgagg tcggtttcgg cgctgccctc
     1261 actgagcacc tcaaacacca ccacgggatc gtctgcgacg gtcgcagtgg gggaaaccgg
     1321 ctggcacacc acgaaggcat cggggtagcg ggttcgcccg tcaacgatga tcttgacgtt
     1381 cgggcccaga ggccggcaac gctttcccgc gagcctcacg gcgagagctc ttcgaagttc
     1441 gaacgttatt tggtcatgcg cgatggtccc accggtcatt gctatcggtt cgaagccatc
     1501 gaactcgtag cgcaactcct ggcgttcctc ccaggcgagg aattctgcca atgtcatcgg
     1561 tagttgcacg gcaacgctca tggcggcatc gatagcactg cagggcgtcc cgctccagga
     1621 attttgccgg tcacggcgat ggcaagagat cgttacgctc cttggctcta acccgtcacg
     1681 tttgaatggc ttgcccttag cgttgttgaa cgttagcgag gctttgccga tcggccaggc
     1741 gagccatcgc ccgcattcag gttttcccgg cgcttccgcc gcctccccaa tacgtcctat
     1801 acccgcgccg caacgtcgcc ccgccccgga gtcgccttgg ccaaacccac cacccgcttc
     1861 gtctgccagt cctgcggcgc cgtcacgccg aaatgggccg gccgctgcga gacctgcggc
     1921 gaatggaaca ccgtcgaacc cgagaccatc acgccccggc cagggccagg agccaaagca
     1981 ccggcggggc agtccgtcag cttcgtcggc ctgcgcggcg acgcagcgcc tccacccaga
     2041 gccgccaccg gtatcgagga actcgaccgg gtgcttggcg gtggccttgt cccgtcctcg
     2101 gcagtgctcg tcggcggcga tcctggcatc ggcaagtcca cgcttctgct gcaggttgcc
     2161 gcccgtctcg cggcggccgg caaacgcgtc ctgtatatca ccggcgagga agccatcgag
     2221 caggtccgcc tgcgcgcccg ccgcctgggt gtcgcagaca ccgcaattga actcgctgcc
     2281 tcgatcaatg tccgcgacat caccgccagt ctggagcggg ccaaagatgc caccctcgtc
     2341 gtcattgact cgatccagac catgtggctc gacgcgatcg acagtgcgcc cggcacggtg
     2401 tcgcaggtgc gggcctgctc gttcgagctg atccgtgcgg ccaaggccag caatttcacc
     2461 ctcgtgctgg tcgggcatgt caccaaggaa ggcggcatcg ccgggccgcg cgtgttggag
     2521 cacatggtcg acgccgtgct gtacttcgaa ggcgaccgcg gccatcagtt ccgcatcctc
     2581 cgggcggtga agaaccgcta tggcgcgacc gacgagatcg gcgtgttcga aatgaccgac
     2641 gttggcctcg ccgaggtcgc caatccctcc gccctgttcc tggccgagcg ccgaggcaac
     2701 atcgccggca gcgcggtatt cgccggcctg gaaggaacca ggccggtgct gctggagatc
     2761 caggcgttgc tcgcccccaa cccgggcggc tcacccagga ggtcggtgat cggctgggat
     2821 ggctcccggc tttcgatgct gctggcggtg ctggaaaccc gcgccggcgt gcggctgaac
     2881 atgacggatg tctggctcaa cgttgccggt gggttgcgcg tcaacgaacc ggccgccgat
     2941 ctggccgtcg ctgccgccat cgcctccgcc gcattcgaca agccgaccgc gccgggcgct
     3001 gtctggttcg gcgagatcgg actgtccggc gaaatccgcc aggtggcaca ggctgacgcc
     3061 cggctgaaag aagcggccaa actaggcttc gactcggcgt gcctgccacg acgcgtggcg
     3121 cacggcaacc ggcggttgtc ggcccccgat ggactgatgt tgcaggaaat tggccacatc
     3181 gccgatctgg ttgcgcgatt cgccccggaa cccacgacgc gagagcattc gtgacttttc
     3241 acacgaccga aaaccacgca gaagacgcag ccggagatgg caagttcgac ctggggatgg
     3301 caaccgcatg acgtcggtcg atctggcggt actgggcgtg atgattttgt ccggcctgct
     3361 ggcgtttttc cgcgggttga ttcgcgaagt tctcagcatc ggcgcctggg cgggcgcagc
     3421 ggtcatcgcc atggtgggtc tccccttcat acggccatgg ctggagccct acgtgccgtc
     3481 ctcggaatgg accgacccgg ccggctatat catcctgttc ctgatctcgt tgatcattct
     3541 ttcggtcgtc gccaaggcga tcgggggggc cgtccgggcc tcggtgctca gtggcgtcga
     3601 ccgcagtctg ggtctgctgt tcggcctcgc ccgaggcgct gtgctggcag tcgccgtcta
     3661 tatcgtcgcg tgtctggcga tcccgccgga tcgctggccg gagccggtcc ttgagtcgcg
     3721 ctcgctgccg tatatctata gtggtgcggt atgggcggcc cggcaattcc cgcaggagta
     3781 ccggccgcag gttctggcac cgccgcccgc gcgacaaacc gctctgggcg ggctaatgaa
     3841 ggcgtctccg atcgggcggg cgagcgaccc gccgctcagc aaataacagg aaatcctccg
     3901 catggctgat gaaatcccgg aagttgctgg acctgacgac gactcgctgc atgaggaatg
     3961 cggcgtattt ggcgtttgga acgttcccga cgccgctgcc gtcaccgctc tgggtttgca
     4021 cgcgttgcag cacaggggtc aggaatcggc ggggatcgtc agcttcgacg gcgtcaaatt
     4081 ccattcgcat cgcggcctgg gttcggtcgg tgacaatttc ggcgatcaga aggtgatcga
     4141 cgggctgccg ggccgcaccg caatcgggca taatcgctat gccaccaccg gcgaaacgat
     4201 tctgcggaac gtccagccgc tgtatgccga cttcgagttc ggcgggtttg ccgtggcgca
     4261 taacggcaac ctcaccaacg cgcatgtatt gcgccgggcg ttggtgcgcc gcggctgcct
     4321 gttccagtcg accaccgact ccgaagtgtt catccagttg atcgccatca gcctgtattc
     4381 caccgttgtg gaccgtctga tcgatgcgct gaaacaggtg atcggcgcct attccctggt
     4441 cgctttgtcg aacgaggcga tgatgggcat ccgcgacccc atgggcgtgc gcccgctcat
     4501 actgggccgc atcggctcgg aaggcaccgg cggatgggtg ctggccagcg agacctgtgc
     4561 gctcgacatc gtcaacgccg atttcgtgcg cgacgtggaa ccgggcgaaa tcgtcgtcat
     4621 caccgatcag ggcgtgcaca gcatccgtcc gttcgctcga acgccggaaa ggttctgcgt
     4681 gttcgagtat atctatttcg cgcggcccag ttcgctgatg gaagggacgt cggtgtatga
     4741 ggcgaggaag cggatcgggc gggagttggc catcgaatct ccggtcgatg ccgatcttgt
     4801 cgtgccggtg ccggattccg ggttgccctc ggcgatgggc ttctcccggg agagcgggat
     4861 tccgttggag ttgggcatca ttcgcaatca gtatattggc cgcacgttta tcgaaccgtc
     4921 cgaccatatc cggcatttgg gtgtgaaact gaagcattcc gccaatcggc cgattttgaa
     4981 ggacaagcgg gtgatcctgg tcgacgactc gatcgtgcga ggtaccacca gcaagaagat
     5041 cgtcgaaatg gttcgcgcgg ccggggcgcg cgaggtgcat atgcggattt cctcgccgcc
     5101 cacgacgcat tcctgcttct atgggatcga tacgccggag cggtcgcaac tgctggccgc
     5161 cagccatagc gtggagcaaa tggcgaagtt gatcggcgcc gatagtttgg cattcgtgtc
     5221 gatcgacgga ttgtaccggg cgcttggtaa agtgggcagg gacccggatc agccgtttta
     5281 ctgcgatgcc tgcctcactg gcgattatcc cattgcgttg ccggatcagg cggataacgc
     5341 cgaccggcaa ttgagtttgc tcgccgaaat tcgttgaatt cccctgggat gcctggcgtg
     5401 ctggcgggcc gggtggcgct gatcaccggc gccagccggg ggcttggcgc agcggttgcc
     5461 gtcgaacttg gccggcttgg tgcgcatgtg gtgattaccg cacgtactca gggtgggctg
     5521 gaggaaaccg acgacgcggt ccgtgcggtt ggcggaactg cgacgctgct gccgctggat
     5581 ttgcgcgagc cggacaagat cgaggcgatt gccgggagta ttttttcccg atttagccga
     5641 ctggatattc tggtccatgc cgccggggta ctgggaaaac tgacgccggt gagccatgcc
     5701 ttgccgcagg accgggacga ggtgctggcg gtgaatactc tggcggcatg gcggctgatc
     5761 caggggtgcg aaggggtctt gcgacagtcc gacgcgggcc gggcggtgtt cgtgacggat
     5821 gtgcgggctc gggagccgtt ggcctattgg ggcccttacg gtgcctccaa ggccgccgcc
     5881 gcgaatttag tgttgacctg ggccggcgag gttgcgttca cgcagttacg ggtcaatctg
     5941 ttcgatccgg gcccgatgcg tacaagatta cgggcggcgg cgtttccggg ggaggatccg
     6001 gcaggggtgc cgctgccgga cggggcggcg gcggtgttga tgacgttgtg tttgcctggg
     6061 gaaaccaggc atggtgaggt ggttcgttac ccgtgaccat gctgtttggg tcgagcggca
     6121 ctcccattca tgccacctgc gcaatgttaa tcgccgatcc gccggccata gttgtaatga
     6181 aattgtaata atcggcaatt cacaagcgtc tatttaaggg gccacctgct gtcgtggata
     6241 tcattccgcc gcgacgagac gaaactgtga accagatcac agcaccagcg gtgcaatgct
     6301 gccaggatgg cgtcctctca cagggagaag acaatgccaa tcgaccttct caatttttct
     6361 t
//
LOCUS       DATAVD010001825         5165 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_544528, whole genome shotgun sequence.
ACCESSION   DATAVD010001825 DATAVD010000000
VERSION     DATAVD010001825.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5165
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_544528"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..1088
                     /locus_tag="VHX39_34840"
     CDS             30..1088
                     /locus_tag="VHX39_34840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine aldolase family protein"
                     /protein_id="HEX3996377.1"
                     /translation="MSHAPKRFDFSIPVRINLYSDTQSKPTPGMKQAMLDAEVGDEQG
                     GSDPSVWQLCDRVAALLGKEAAMFLPSGTMCNQVAIATHCRPGDEILAHEDAHIQAAE
                     GGAPGAISGVLIKGLTGERGQFSAATLEDAIRPISRYSPSQRLVEIEQTANKGGGACW
                     PVAAVREVAEAAHRHNMAVHVDGARLMNAAVALGVPASEIVADCDTVWLDFTKGLGAP
                     LGAVLAGTADFIGQAWRWKQRLGGSMRQGGMNAAACVYALDHHIDRLAEDHTNAASLA
                     RGMAQIPGITVETPETNLVFFDTKGTGMTSAAFAAKLRQAGVMVSVSDTWRGRACLHL
                     DVTAPMVDEAVAIMRGVV"
     gene            complement(1098..2312)
                     /locus_tag="VHX39_34845"
     CDS             complement(1098..2312)
                     /locus_tag="VHX39_34845"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEX3996378.1"
                     /translation="MKNSAFAIQTTHVGSLPRPDDVIELAGRRQSGEAVDPAAYQARL
                     AGAVSDVVRLQQEVGISIPGDGEFGKEMGQRVNYGAWWSYSFQRLGGLKLGTELYRLP
                     PQRSTHDHITLTSFGDRRDRAMFNAAYNDPDSGVSTNRGGPGMKLPVCVDKITYTGQA
                     AIAADIAHFKAGLAAAGIDEGFMTSIAPGSASRIGNEYYKTEEELIFACADAMREEYK
                     AIIDAGLILQLDDPSIAENWDMVNPEPSVDAYRKFTMVRVEALNHAIKGLPKDRIRFH
                     LCWGSWHGPHVTDVPMQDIVDAMLAIDAQGYSFEAANVRHEHEWRVWSDVKLPDGKIL
                     IPGIVSHATNVVEHPQLVADRIVRFAKLVGRENVIASTDCGLGGRIHPDIAWAKLKTL
                     AMGADLATKQLW"
     gene            complement(2327..3370)
                     /locus_tag="VHX39_34850"
     CDS             complement(2327..3370)
                     /locus_tag="VHX39_34850"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996379.1"
                     /translation="MTNPQSETTWIISTIAGTGEKGCAGDGGRATEALLNNPFDLAFD
                     PAGNLIFSDTYNHRICRIDAQTQVISTVAGCGESGFDGDGGPAIKAKLNQPYGVVVDD
                     TGRIFFADRMNGRVRMVRPDGTIATLAGDGSGKYSGDGGPSPVAGLAEPNGLALRDDH
                     LYITDVADHRVRVVDLTTGTIATFAGTGVARDDGDGGPAIRAGTFGARAVAFAPDGSL
                     YLMERQGSCIRKIEDGIIYTVAGTGARGYDGDGGDARKAVFDAPKEMAVAPNGDIFVV
                     DTENHAIRLIDAATWIIRSIAGNGTAGPGVDGGAATQSCLSRPHGAVVAADGSVYIGD
                     SENHRVRKLTRAS"
     gene            3468..5066
                     /locus_tag="VHX39_34855"
     CDS             3468..5066
                     /locus_tag="VHX39_34855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996380.1"
                     /translation="MDNQTDLGSARALYDKLEDRILQRDQVGASDVYYDLIRAGRPLT
                     EIVAEGVRVHAPFTHVPYHERIDDGYPNFVNNDHCLLSARATINLTKMVPEKFAMLPM
                     AQTIWYIPSGLDIWNQKINKAPGHYTRHRGNLGEVTAPPAPVVYWQDQQPVSLEGPLK
                     ERLNHWMTLVHRGNVIEAYQVFLGLMQNPAERKDVLAEMCFAGLMDVQDRLMNNRSYT
                     TGHKAYRARSTVEIGNALGWDNAHDVVYAGALDIAVGPRWYSTYEMACNYVKMQIEGE
                     SLHAVPYGGVSDAELAILRNTGPVTAEESRHLIDSVLRDNELTVLEQVTLLLKAGKNP
                     RRILDVLQLAVAQIVLQTHTPENFNMPHHCYEYHNTLAWFWDNFDHPRRLRLLYIAAC
                     FANRVAGHQIGLGDVHPEAIPTADAGGLSQAQVLDRVDTAICSLNGPDSLAWTQAYCD
                     NFSDRGPLVSRIALAATKLGNDPHNQEIAQCMLMDFGTNQQPNRDRLLLCAAYHTAMH
                     RKYGDPLEPAKRFGRAFDMAELAA"
BASE COUNT          967 a         1569 c         1622 g         1007 t
ORIGIN      
        1 cggccgcagg ctgccggagg gatcagacca tgagccatgc accgaagcgt ttcgatttct
       61 ccatccccgt gcggatcaat ctctattccg acacgcaatc gaaaccaacg ccggggatga
      121 agcaggcgat gctcgacgcc gaggtgggcg atgagcaagg cggctcggat ccgtccgtat
      181 ggcagttatg cgatcgcgtg gcggcgttgc ttggcaagga agccgcgatg tttttgccaa
      241 gcgggacgat gtgcaatcag gtggcgattg ccacgcattg ccggccgggc gacgaaatcc
      301 tcgcgcatga ggatgcgcac atccaggctg ccgaaggcgg tgcgccgggc gcaatcagcg
      361 gcgtgctgat caaagggttg accggcgagc gcggccagtt ctccgctgcc acgctggagg
      421 acgcgatccg cccgatttcg cgctattcgc catcgcaacg attggtcgag attgagcaga
      481 ctgccaacaa aggtggcggc gcatgctggc ccgtcgccgc ggtgcgagag gtcgccgagg
      541 cagcgcaccg gcacaacatg gcggttcacg tcgatggcgc acggctgatg aatgcggccg
      601 tggcgcttgg cgtcccggcc tcggagatcg ttgcggattg cgataccgtc tggctggatt
      661 tcaccaaagg tcttggcgca ccactgggcg cggtattggc cggcaccgcc gacttcatcg
      721 gtcaggcctg gcgatggaag cagcgactgg gcggctcaat gcgccagggc gggatgaacg
      781 cggcagcctg tgtttatgcg ctggatcacc atattgaccg gctggccgag gatcacacga
      841 acgccgcctc actggcgcgc ggaatggcgc aaatccccgg gattacggtg gaaacgccgg
      901 agaccaatct ggtgttcttc gataccaagg gtaccggaat gacctctgca gcgtttgccg
      961 ccaaactgcg tcaggccggc gtcatggttt cggtatccga cacttggcga gggcgggcat
     1021 gcctgcatct cgacgtgacg gcgccaatgg tggacgaagc ggtcgccatc atgcgtgggg
     1081 tggtttgacc gagccggtca ccaaagctgt ttcgttgcga gatcggcacc cattgccaaa
     1141 gttttgagtt tggcccaggc gatatcggga tgaatgcggc cgccaagacc gcagtcggtg
     1201 gaggcgatga cgttttcccg gccgacaagc ttcgcaaagc gaacgatccg atctgccacc
     1261 agttgcgggt gttccacaac gttggtggcg tgactgacaa tgcctgggat caggatcttg
     1321 ccgtcgggca gtttcacgtc gctccagacc cgccattcat gttcgtgacg gacgttggcg
     1381 gcctcgaacg aatagccctg tgcgtcaatc gccagcatgg cgtcgacgat gtcctgcatg
     1441 ggaacgtcgg tgacatgcgg cccgtgccaa ctgccccagc acaaatggaa ccggatgcga
     1501 tccttcggta atcccttgat cgcgtggttc aatgcctcga cacggaccat ggtgaatttg
     1561 cggtaggcgt ccacggaggg ttccgggttc accatgtccc agttctcggc gatcgaggga
     1621 tcgtcgagtt gcaggatcaa accggcgtcg atgatcgcct tgtattcctc gcgcatggcg
     1681 tcggcacagg cgaagatcag ctcttcttcg gtcttgtaat attcgttgcc gatgcgcgac
     1741 gcgctgcccg gcgcgatcga ggtcatgaag ccttcatcga tccctgccgc cgcaaggccg
     1801 gccttaaaat gcgcgatgtc ggcagcgatt gctgcctgac cggtgtaggt gatcttatcc
     1861 acgcagaccg gcaatttcat ccccggtccg ccacggttgg tggatacgcc ggagtctggg
     1921 tcgttgtacg cagcgttgaa catcgcccga tcgcgccggt cgccgaagct ggtgagggtg
     1981 atgtggtcat gcgtcgaccg ttgcggcgga agccgataca gttccgtgcc gagtttcagg
     2041 ccgcccagtc gttggaatga ataactccac caggcgccgt agttgacgcg ttggcccatt
     2101 tccttgccga actcgccatc gcccgggatg ctgatgccga cctcctgctg caagcgcaca
     2161 acatcgctga cggcaccggc gagacgggcc tggtaagcgg ccgggtcgac tgcctcgccg
     2221 gactgccgtc tgccggcgag ttcgatcaca tcgtccggtc gcggcaggct gcccacatgg
     2281 gtcgtctgaa ttgcaaaagc gctgtttttc ataacggacc gtcctgtcag ctggcacggg
     2341 taagtttgcg gacgcgatgg ttctcactgt cgccgatgta aaccgagccg tccgccgcca
     2401 cgacggcacc atgcggacgg gacaggcagg actgcgttgc cgcaccgcca tcgactcctg
     2461 ggccggccgt accattgccg gcaatgctgc gtatgatcca ggttgcagca tcgatcaacc
     2521 gaatggcatg attttcggta tcgaccacga agatgtcgcc gttcggtgca acggccattt
     2581 ccttcggcgc atcgaacacc gccttgcgag cgtctccgcc atctccgtcg tagcctcgtg
     2641 cgccggtccc ggcgacagtg tagatgatgc cgtcctcgat tttgcggata caactgccct
     2701 ggcgttccat caggtagagc gaaccgtcag gcgcgaacgc aacggctctc gcgccgaacg
     2761 ttccggcgcg gatcgccggt ccgccgtcgc cgtcatcgcg cgccacaccg gtaccggcga
     2821 aggtggcgat cgtgccggtg gtcagatcaa ccacccggac ccgatggtcg gcaacgtcgg
     2881 tgatgtacaa atgatcgtcc cgcaacgcca ggccgttcgg ctcggcaagg ccggcgacag
     2941 gcgagggccc accatcgccg ctgtatttcc ctgaaccgtc accggccaat gtggcgatcg
     3001 tgccgtcagg ccggaccatc cgcacccggc cgttcatccg gtcagcgaag aaaattcgtc
     3061 cggtgtcatc gaccacgacg ccatagggct ggttcagttt cgctttgatt gccggtccgc
     3121 cgtcaccgtc aaacccgctt tctccgcacc ccgcgaccgt gctgatcacc tgggtttgcg
     3181 catcgatccg gcagatccga tgattatacg tatcggaaaa gatcaaattg ccggctggat
     3241 cgaatgcgag atcgaagggg ttgttcaaca acgcctcggt cgcgcggccg ccgtcgccgg
     3301 cgcagccttt ctcgccggtg ccggctatcg tgctgatgat ccaggtggtt tcgctctgtg
     3361 gattggtcat tgctcgcatg cctcccgacg agggcatcca tggttgtccg gcacggtctg
     3421 tcaagcgtaa gcttcaggtc acaatggatg ttccggaggt tcgcacgatg gataaccaga
     3481 ccgatctcgg ctcggccagg gcgctttacg acaagctcga agaccgcatt ctgcagcgcg
     3541 accaggtcgg ggccagtgac gtctactacg accttatccg tgccggtcgg cctctaacgg
     3601 aaatcgtcgc cgagggcgtg cgggtccatg ccccgttcac gcacgtgcca tatcacgagc
     3661 ggatcgatga cgggtatccg aactttgtca acaacgacca ttgcctgctc agtgcgcgcg
     3721 ccacaatcaa tctgacgaag atggtgccgg aaaagtttgc catgctgccg atggcgcaaa
     3781 ccatctggta catccccagc gggctggata tctggaacca aaagatcaac aaggcgccgg
     3841 gccattacac ccgccaccgc ggcaatctgg gggaggtgac ggcgcctccg gctccggtcg
     3901 tctactggca ggaccagcag ccggtgagcc tggagggccc gctgaaggag cgtctcaacc
     3961 actggatgac cttggtgcat cgcggcaacg tgatcgaggc gtatcaggtg ttcctcggcc
     4021 tgatgcagaa ccccgccgag cggaaagatg tgttggcaga aatgtgcttt gccggcctga
     4081 tggatgtgca ggaccggctg atgaacaacc ggtcctatac gaccgggcat aaggcgtatc
     4141 gtgctcgttc gacggtcgag atcggcaatg cgcttggctg ggacaatgcg cacgacgtgg
     4201 tttacgccgg tgctttggat atcgcggtcg ggccgcgctg gtattccact tacgaaatgg
     4261 cctgcaacta cgtcaaaatg caaattgagg gtgagtcgct gcatgcggtc ccttatggcg
     4321 gagtcagcga cgcggaactc gccattctcc gcaacaccgg tccggtcacg gccgaagagt
     4381 ctcgccatct gatcgactcg gtgctgcgcg acaacgaact gaccgtgctg gagcaggtca
     4441 ctttgctgct gaaggcaggc aagaacccac ggcgcattct ggatgtgttg cagttggcgg
     4501 tggcgcagat cgtgctgcag acgcacacgc cggaaaactt caatatgccg caccattgct
     4561 acgagtatca caacactctg gcgtggttct gggacaattt cgatcatccg cggcggctgc
     4621 ggctgctcta catcgcggcc tgctttgcca atcgcgttgc cggtcatcaa attggacttg
     4681 gcgatgtgca ccccgaggcg atcccgaccg ccgacgctgg cggcctgtca caggcacagg
     4741 tgctggaccg ggtcgatacg gcgatctgct cactgaatgg tccggacagc ctggcgtgga
     4801 ctcaggccta ttgcgacaac ttcagcgatc gcgggccact ggtcagccgc atcgcgctgg
     4861 cggccaccaa gctgggcaac gatccgcaca accaggaaat cgctcagtgc atgctgatgg
     4921 atttcggcac caatcagcag cccaatcggg atcggctgtt gctgtgcgcc gcttaccaca
     4981 ccgcgatgca ccgcaaatat ggcgatccgc tggagccggc gaaacgcttc ggtcgcgcgt
     5041 tcgacatggc ggaacttgcg gcgtgatcaa aatgctcgga ctgctcacgc gcaagccgca
     5101 tttgacgcat gagcagttcg ttgatcattg gctgaacatc cacggaccgc tggcactctc
     5161 ggtgc
//
LOCUS       DATAVD010001826         5251 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2034488, whole genome shotgun sequence.
ACCESSION   DATAVD010001826 DATAVD010000000
VERSION     DATAVD010001826.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5251
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2034488"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..374
                     /locus_tag="VHX39_34860"
     CDS             <1..374
                     /locus_tag="VHX39_34860"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3996381.1"
                     /translation="ALYARLTRANMLETMNEDFIRTARAKGLPNRTVVMKHALANALI
                     PITTVLGIIVSLLISGSVVVETLFSIPGIGQLLTQAVLNRDYPMVQGGLLITTALLVL
                     INIGVDVCYALLDPRVRYDGA"
     gene            361..1221
                     /locus_tag="VHX39_34865"
     CDS             361..1221
                     /locus_tag="VHX39_34865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3996382.1"
                     /translation="MTEPSRASPVGATMRRLLHHRLFVLGCVLFGIVLLVAILAPIIA
                     PLDPNKLSMRNKFLPPGRDYIFGTDNFGRSLWSRVVWGAQLSMLIGGAVVAINAILGT
                     IIGAAAGYFRRLDNGLMRINDALMAFPAVLLAIGVTSVLGPSVNDVIIALAIVYTPRT
                     ARIVRSSVIVLREMEYVQAALAAGAGHWRILRRHILPNAMAPLIVQLSFLFAYAVLTE
                     ATLSFLGVGAVPPTPTWGNIMAEGRQYMTDAPWIITIPGAALMITVLGLNLLGDGLRD
                     VLDPRLRIQQ"
     gene            1218..2189
                     /locus_tag="VHX39_34870"
     CDS             1218..2189
                     /locus_tag="VHX39_34870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3996383.1"
                     /translation="MSLLEVRDLTTSFQTGGGEVTAVENISFSLDKGEILGIVGESGS
                     GKSVTALAIMGLLPRPPARIRGGSIMFEGQDLLTLSDRAMQRLRGPGIAMVFQEPMTS
                     LNPVFTIGEQIMETIGAHENLSQKARFARAVEMLEKVGIPSATSRMTDYPHQLSGGQR
                     QRVMLAIALVCRPRLLIADEPTTALDVTIQAQILSLLMDLRDEFGMAIMMITHNMGVI
                     AETADRVLVMYAGRAVEQAPVGRLFDHPLHPYTRGLLSCVPTLDQDQDRLVAIPGSLP
                     EPSRRPSGCRFSARCLHAVAACGEAIPPWETVEPNHAAACIRVRDIG"
     gene            2189..3175
                     /locus_tag="VHX39_34875"
     CDS             2189..3175
                     /locus_tag="VHX39_34875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX3996384.1"
                     /translation="MAALLEAIGLTKHYQVEAGGFFRRTRMALRAVDGVDLTIEPGET
                     LGLVGESGCGKSTLGRLLIRLIPATAGQVVFDGQEITSLGPKALRAARRTMQIVFQDP
                     FGALNPRMSVEETIMEPLLIHGARRSAVTREAVARMLDMVGLPDSARYRFPHEFSGGQ
                     RQRIGIARALILRPKLVVCDEPVSALDVSVQAQIVNLLSDLQGELGLTYLFIAHDLGV
                     VKHISTRVAVMYLGKVVEVADKRSLYARPSHPYTQALLASVPVTHPSQRKRRVGARSA
                     LSGDIPTALAPPSGCRFHTRCPHVMSVCRTEEPAMRMVATGHQAACHLLAGP"
     gene            3227..3394
                     /locus_tag="VHX39_34880"
     CDS             3227..3394
                     /locus_tag="VHX39_34880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014197509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996385.1"
                     /translation="MKQPHTEQSVAHTENQQNTGNHKKPGASDEHGADRFGGTRTGKE
                     NIEKTSDKPTR"
     gene            3451..4071
                     /locus_tag="VHX39_34885"
     CDS             3451..4071
                     /locus_tag="VHX39_34885"
                     /inference="COORDINATES: protein motif:HMM:NF019590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HEX3996386.1"
                     /translation="MIIEVRTYQLKPGSVAEVEKRFGEKLSVREKLSKMTALWHTEVG
                     ALNEITHIWTYDSFEQRMAIRTEAVKTKVWPPAIGEFIVSMQSEIFIPAPFSPSLEPK
                     EVGPLFEIRSYTLAPGALPGMMERWAAKIDERVKLSPLVGAWYSELGGLNKWVHIWAY
                     KDAAERQRIRAEAVARGVWPPGGAASGLVVKQENKLVMPAACSPLR"
     gene            4078..5220
                     /locus_tag="VHX39_34890"
     CDS             4078..5220
                     /locus_tag="VHX39_34890"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3996387.1"
                     /translation="MQVGTALSVLAQPERPDVALYNEHMALGDLAEPLGFDSLFALEH
                     HFTGYSMSPSPLQLLSYYAGRTKRITLGTCVIVLPWHDPIRVAEQIALLDVISGGRTL
                     MGFGRGAASVEYAGFRIPMDEARPRFVESAQLIIKALSEDSFEWDGEFYKIPRVSIRP
                     RPISHPERRFYASSVSPESAEVMAKLGFGMLIVMQNEWPKAAEDVYRYREMVQGVGHT
                     PRPPIILTNVACAPTREEAREWALRYLSEKWDSIDNHYHFSDGHLGSVKGYESYGKLA
                     KTYTKMKDASYRSKATDFYLSIQIVGTPDDCVQQIAELRRLTGMDHLVTEFSFGSMPH
                     HLAEMNMRLFAERVLPVLQRDAAFQGIIDPTAEKTEAGDDRLFAPA"
BASE COUNT          940 a         1485 c         1795 g         1031 t
ORIGIN      
        1 ctgcgttgta cgcgcggctc accagagcca acatgctcga aacaatgaac gaggacttca
       61 tccgcaccgc ccgagccaag ggactgccga accggacggt ggtgatgaag catgcgctgg
      121 ccaatgcgct gatcccgatc accaccgtgc ttgggatcat cgtcagcctg ctgatctccg
      181 gttcggtggt ggtggagaca ttgttttcca tcccgggcat cggccagttg ctgacccagg
      241 cggtgctgaa ccgggattat ccgatggtgc agggcggctt gctgatcacc accgcgttgc
      301 tggtgctgat caacatcggt gtcgatgtct gctacgccct gctcgatcca agggtgcgct
      361 atgacggagc ctagtcgtgc gtcaccggtc ggggccacga tgcggcgcct gctgcatcac
      421 cggctgttcg tcctgggctg cgtattgttc gggatcgttc tgctggtggc gatcctggcg
      481 ccgatcatcg cgccgctgga tccgaacaag ctgtcgatgc ggaacaagtt cctgccgccg
      541 ggccgggact acatcttcgg caccgacaat tttggccgtt cgctgtggtc gcgggtggtg
      601 tggggcgcgc agctttcgat gctgatcggc ggggcggtgg tggcgatcaa cgccattctg
      661 ggaactatca tcggcgccgc cgccggctat ttccggcgac tggacaacgg gctgatgcgc
      721 attaacgacg cgctgatggc gtttcccgcc gtgctgctgg cgatcggggt gacctcggtg
      781 ctggggccgt cggtcaacga cgtcatcatc gccctggcga tcgtctatac accgcgtacg
      841 gcgcgcatcg ttcggtcctc ggtcatcgtg ttgcgcgaga tggaatatgt gcaggcggcg
      901 ctggccgcag gggccgggca ttggcgcatc ctgcgccgcc acatcctgcc gaacgcgatg
      961 gcgccgctga tcgtgcagct ttcgtttctg ttcgcctacg cggtgctgac cgaggcgaca
     1021 ttgtcgtttc tgggcgtcgg cgccgtgccg ccgaccccaa cctgggggaa tatcatggcc
     1081 gagggacggc aatatatgac cgatgcgccc tggatcatca ccatccccgg cgccgcgctg
     1141 atgatcactg tgctggggct gaacctgctg ggtgacggtt tgcgcgacgt gctcgatcca
     1201 agattgagga tccagcaatg agcctgctgg aggtccgcga cctgaccacc tccttccaga
     1261 ccgggggcgg cgaggtgacg gcggtcgaga acatctcctt cagccttgac aaaggcgaga
     1321 tcctggggat cgtcggcgaa tccggcagcg gcaagagtgt gaccgccctg gccatcatgg
     1381 gccttctgcc gcgcccgccg gcacgtatcc gtggcggcag catcatgttc gaggggcagg
     1441 acctgctgac actgtccgac cgggcaatgc agcgcctgcg cggccccggc attgccatgg
     1501 tgttccagga gccgatgacc tcgctgaacc cggttttcac catcggcgag cagatcatgg
     1561 agacgatagg cgcacacgaa aacctgtcac agaaggcccg cttcgctcgg gcggtggaga
     1621 tgctggagaa agtcggcatc ccgtcagcaa catcgcgtat gaccgactat ccgcatcaac
     1681 tgtccggcgg gcagcggcag cgggtgatgc tggcgattgc gctggtgtgc cggcctcggc
     1741 tgttgatcgc cgatgagccg acgaccgcgc tagatgtgac gatccaggca cagatcttgt
     1801 cgttgctgat ggatttgcgg gacgaattcg gcatggcgat catgatgatt acccacaaca
     1861 tgggggtgat cgccgagacc gccgaccggg tgctggtgat gtatgctgga cgggccgtcg
     1921 agcaggcccc ggtggggcgg ttgttcgatc atccgctgca tccctacacg cgcggcttgc
     1981 tgtcctgcgt gccgacgctc gatcaggatc aggaccggct ggtcgccatc ccgggtagcc
     2041 tgccggaacc gtcgcggcgg ccaagcggct gccggttttc ggcgcgatgt ttgcacgcgg
     2101 tagcggcgtg tggagaggcg attccgccgt gggaaactgt tgagccgaac cacgccgccg
     2161 cctgcattcg tgtcagggac atcggctgat ggcggcgttg ctggaagcca ttggcctgac
     2221 gaagcattat caggtggagg ccggcggttt ttttcgccgg accaggatgg ctttgcgcgc
     2281 tgtcgatggc gtggatctga cgatcgagcc aggggaaacc ttggggttgg tgggtgagtc
     2341 gggatgcggc aagtcgactc tgggacgcct gctgatccgg ttgatcccgg ccaccgcggg
     2401 gcaggtggtt ttcgatgggc aggagatcac cagccttggt cccaaggcac tgcgtgctgc
     2461 caggcggacg atgcaaatcg tcttccagga cccgttcgga gcgctgaatc ctcggatgtc
     2521 ggttgaagaa acgatcatgg agccactgct gatccatggc gcgcgccgta gtgcggtgac
     2581 gcgggaggcg gtggcgcgga tgctagatat ggtggggttg ccggacagcg cccgctatcg
     2641 ctttccgcac gagttttccg gtgggcaacg gcaacggatc ggcatcgcaa gggcactgat
     2701 cctgcggcca aaactggtgg tgtgcgatga gccggtgtcg gcgctggatg tttcggtgca
     2761 ggcacagatt gtcaacctgc tgtccgacct gcaaggcgaa ctcgggctga cctatctgtt
     2821 cattgcccac gatcttgggg tggtgaagca tatctcaacg cgcgtggcgg tgatgtatct
     2881 ggggaaggtg gtggaggtcg cggacaagcg atccttgtat gcgcgtccgt cgcatcctta
     2941 tacccaggcg ctgctggcat ccgttccggt tacgcatcca tcgcaacgca agcggcgtgt
     3001 tggcgcccgg tcggctcttt cgggcgatat tcccaccgcg ttggcgccac cctcggggtg
     3061 ccggtttcat acccgctgcc cgcatgtgat gtcggtttgc cggacagagg agccggcgat
     3121 gcgcatggtg gccacaggtc atcaggcggc ttgccatctg ttggcagggc cataaaaccc
     3181 gatccaggct cgttcgttat cttcgcgggc aacaggagtc agggcgatga aacagccgca
     3241 caccgaacaa tcggtcgcgc acacggaaaa tcagcaaaat accggcaacc acaagaagcc
     3301 tggcgcttcg gacgagcacg gcgcagatcg cttcggcggc acacgaacgg gcaaagaaaa
     3361 catcgagaag acgtctgaca agccaacccg ctgatgtgac aaccccggcg catcccgcta
     3421 tcgtccggcc aggggatggg ggaagcacca atgatcatcg aagttcggac gtatcaactg
     3481 aagccgggtt cggtcgccga ggtcgagaag cgcttcggcg agaaactgtc ggtgcgggag
     3541 aaactctcga agatgacggc gctgtggcac accgaagtgg gggcgctgaa cgagattacg
     3601 catatctgga cgtatgacag tttcgagcag cggatggcga tccgaacgga ggcggtgaag
     3661 acaaaggtct ggccgccggc gatcggcgag ttcatcgtgt cgatgcagag cgaaattttc
     3721 attccagcgc cgttctcacc gtcgctggag cccaaggaag tggggccgtt gttcgagata
     3781 cggtcctata ctctggcgcc gggtgcgctg ccgggcatga tggagcgttg ggccgcgaag
     3841 atcgatgaac gggtgaagct gtcgccgctg gtgggcgcct ggtactcgga actcggtggg
     3901 ctgaataagt gggtccatat ctgggcctac aaggacgccg ccgaacggca gcgcattcgt
     3961 gccgaggctg tggcgcgtgg cgtttggccg ccgggtgggg cggcgtcggg gctggttgtg
     4021 aagcaggaaa acaagctggt gatgccggct gcgtgctctc cattgaggta aggtgtcatg
     4081 caggtcggga cagcactgag cgtactcgcc caacccgagc ggccggatgt ggcgctgtat
     4141 aatgagcata tggcgctggg ggatctggcg gagccgctgg gtttcgattc gctgttcgcg
     4201 ctggagcatc acttcaccgg ctattcgatg tcgccgtcgc cgctgcaact gttgagctat
     4261 tacgcggggc gtacgaaacg gatcaccctg ggtacgtgcg tcatcgtgct gccctggcat
     4321 gatccgatcc gggtggcaga gcagatcgcg ctgcttgacg tcatcagcgg cgggcgcacg
     4381 ctgatgggat tcggccgtgg tgctgccagc gtcgaatacg cgggattccg cattccgatg
     4441 gacgaagctc ggcccaggtt cgtcgaatca gcgcagttga tcatcaaggc gctaagcgag
     4501 gattcgttcg aatgggacgg ggaattctac aaaatccccc gtgtatcgat ccggccacgg
     4561 cctatttctc atccggaacg gcggttctat gcgtcatctg tcagtccgga gtcggccgag
     4621 gtcatggcga agctgggctt cgggatgttg atcgtgatgc agaacgaatg gccgaaggcg
     4681 gccgaggacg tatatcgcta tcgcgagatg gtccagggcg tcggtcatac gcctcggccg
     4741 ccaatcatac tgacaaatgt cgcgtgcgcg ccgacgcggg aggaagcgcg ggaatgggca
     4801 ttgcgctacc tgagcgagaa gtgggattcg atcgataacc actaccattt ctcggatggt
     4861 catctggggt cggtgaaggg ctacgagtca tacggcaagc tcgcgaagac ctacacgaag
     4921 atgaaggacg cgagttaccg gtcgaaggcg acggacttct atctgagcat ccaaattgta
     4981 ggcacgccgg acgactgtgt gcagcagatc gcggaattgc gccggctgac ggggatggac
     5041 catctggtga cggagttttc attcggcagc atgccacatc atctggccga aatgaacatg
     5101 cggctgttcg ccgaacgtgt cctgccggtg ttgcagcggg atgcggcgtt ccaggggatt
     5161 atcgatccga cggcggagaa gactgaggcg ggcgatgacc ggttgttcgc gcccgcctga
     5221 gaccctctcg tgtcagagcc ggccttgtgc c
//
LOCUS       DATAVD010001827         2848 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3712066, whole genome shotgun sequence.
ACCESSION   DATAVD010001827 DATAVD010000000
VERSION     DATAVD010001827.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2848
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3712066"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..499
                     /locus_tag="VHX39_34895"
     CDS             <1..499
                     /locus_tag="VHX39_34895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996388.1"
                     /translation="SHAILRHIYGDLQPPADRLTGRLLRFDQTEFFGGDPRACMSEFG
                     HVYVPHAVENGTPARVHIALHGCKQGYDHVNFVYGRPDTANQPPFGNRYVTTTGYNQI
                     ADSNNIIVLYPQVQGRSDNFAQNPDGCWDWWGYSSADPGRPDYYSRNAIQIKAIYGML
                     RRLGG"
     gene            524..970
                     /locus_tag="VHX39_34900"
     CDS             524..970
                     /locus_tag="VHX39_34900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996389.1"
                     /translation="MADIETMQADQPVEAALPAATPHMRKAADVLSNWAARAAGTGVA
                     TAALLPWSVDPRSWPHLWSELWQMQDAVWQRQRQMQDNWLRGWLVWADECTQARGANT
                     MSKLVAQEFDLVAQWHELVSDQATDVVSLLENLEINYAYWVNEKLR"
     gene            1035..2288
                     /locus_tag="VHX39_34905"
     CDS             1035..2288
                     /locus_tag="VHX39_34905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007437866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEX3996390.1"
                     /translation="MRRAIMVVLDGLRRDFVTEATTPRLTAFMRQAEYFPAFRSAFPS
                     ATRIVSATFATGCFPARHTLQGNAVALLESGKLVPHDVGRPDFLHHKKAATGQALAVP
                     TLAERLAPHGGAIIFNNVSPGAARAHDPDGFGYVYHRAFCTAPGLRPVDDPLHVTLDA
                     AGDRAMTDRFITEVIQQRRPALGLLWCGEPDHIQHNVPLGSPEHLAVLREADRHAGMV
                     IDAVAQERDNGQEILLIVASDHGHETVSGVVDVEADLVAAGLKHGADSTDVVAMANGT
                     ATLIYLHPDAAARRAALHSYLQTASWAGAVFGRDELAEVGQAPLHGLAFAVSMRADGG
                     LNEFGVPGRSLVAQPRWDKPDRLGCGQHGGLGVFEQSPVLLIDGPGFNAGGQRGDAVR
                     IVDLAPTILRHLAVPADGMDGRALG"
     gene            2432..2746
                     /locus_tag="VHX39_34910"
     CDS             2432..2746
                     /locus_tag="VHX39_34910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996391.1"
                     /translation="MTHLKTLFIAAPVALGLLAAPAAHAEWRGHGGGWGHQGYYHGGG
                     GRGYGLPLVGALLGAAVVGGIIASQPAYAPPPAYYAPPPVYYAPPAYSYYPQPYYAAP
                     GY"
BASE COUNT          517 a          888 c          890 g          553 t
ORIGIN      
        1 atcccacgcc atcctgcgtc atatttacgg cgatctgcag ccgcccgccg atcgcctgac
       61 cggccggttg ttgcgcttcg atcagaccga gttcttcggc ggcgatccgc gcgcctgcat
      121 gagcgaattc ggccacgtct atgtcccgca tgccgtcgag aacgggactc ccgcccgtgt
      181 gcacatcgcc ttgcatggct gcaaacaagg ttacgaccac gtgaatttcg tctacggccg
      241 gcccgacact gccaaccagc ctccgttcgg caaccgttac gtgactacga ccggctacaa
      301 tcagatcgcg gacagcaaca atatcatcgt gctttaccca caggttcaag gtcgcagcga
      361 caactttgca cagaatccgg atggctgctg ggattggtgg ggttactcca gtgcggatcc
      421 gggccggccc gactactatt ctcgcaacgc cattcagatc aaagccattt acggcatgtt
      481 gcgccggctt ggcggataat cgcgcgaaag gactcgtccc accatggcag atatcgagac
      541 catgcaagcc gaccaacccg tcgaagccgc gctgccggct gcaaccccgc acatgcgcaa
      601 agccgccgac gtgttaagca attgggcggc gcgcgccgcc ggcaccggcg ttgcgaccgc
      661 agccttattg ccgtggagcg tcgacccgcg atcctggccg catctgtggt ctgaactgtg
      721 gcaaatgcag gatgcggtgt ggcagcggca gcgccaaatg caggacaact ggctgcgagg
      781 ctggctcgtc tgggctgacg aatgcaccca ggccaggggc gccaatacga tgtccaaact
      841 ggtcgcacag gaattcgacc tggtggcgca atggcatgaa ctggtcagcg atcaggcgac
      901 cgatgtggtc agtctgctgg aaaacctcga aatcaattac gcatactggg tcaacgagaa
      961 actgcgctaa cttggccgag atggtcgcgt ggtgtaacat cgccggcgca acagcagacc
     1021 agagaaaacc caaaatgcga cgtgcgatta tggtcgtcct cgacggtctc cgccgggatt
     1081 tcgtgacgga ggcgacgacg ccaaggctga ccgcattcat gcggcaggcg gaatatttcc
     1141 cggcatttcg cagtgcgttc ccctcggcaa cacggatcgt gtcggcaacg tttgcgacgg
     1201 gatgcttccc ggcgcgtcac accttgcaag gcaatgcggt ggcgttgctg gaatccggaa
     1261 aattggtgcc gcatgacgtc ggccggccgg attttttgca tcacaagaag gcggccaccg
     1321 gacaggcgct ggcagtgcca actttggcag aacggctggc gccacatggc ggagcgatca
     1381 ttttcaacaa cgtctcgccg ggtgctgcgc gcgcccatga tcccgatggg tttggctatg
     1441 tttatcatcg ggcattctgt accgcacctg gcctgcggcc ggtcgacgat ccgctgcacg
     1501 ttacgctcga tgcggccggc gaccgggcaa tgaccgatcg tttcatcacc gaggttatcc
     1561 aacagcgccg gccggcgctt ggcctgcttt ggtgcggcga gccggatcat attcaacaca
     1621 acgtgccgct tggttcgccc gagcatctgg ctgtgctgcg cgaggccgac cgccatgccg
     1681 gcatggtgat cgatgcagtg gcgcaagaac gcgacaatgg acaagaaatt ctgttgatcg
     1741 ttgcctccga tcacggccac gaaacggtca gcggcgtggt cgatgtggaa gcggatcttg
     1801 tcgctgccgg actgaagcat ggtgcggact cgaccgacgt tgtggcgatg gcgaacggta
     1861 cggcaacact gatttatttg cacccggatg ctgccgcccg ccgtgcggcg ctccactcct
     1921 atctccaaac cgcctcctgg gccggcgctg tgttcggccg tgatgagttg gccgaggtcg
     1981 ggcaggcacc gctgcacggt ctggcattcg ccgtgtcgat gcgggccgat ggcgggttga
     2041 atgagttcgg cgtgcccggc cgatcgctgg tggcgcagcc gcgatgggac aaacccgacc
     2101 ggttgggctg cggtcaacac ggcggtctgg gtgttttcga gcaatccccc gtgttgctga
     2161 tcgacggccc aggcttcaat gccggcgggc agcgagggga cgcagtgcgg atcgtcgatc
     2221 tggcgccgac catcctgcgg catttggccg tgccggcgga cgggatggat ggacgagcgc
     2281 ttgggtaagg cttgcggcgc gcctccacgg ccgttgtcat gattaaggca gagcctcccc
     2341 ccaagccctg atgaaatcac cgtcccgcca cagtcctgac acgtgtggcg cccacttctc
     2401 cgatgctgag gccaatgtaa aggaaccggc catgacacat ctgaagacac tgtttattgc
     2461 tgctccggtc gctctgggct tgttggcagc acctgccgcc catgccgaat ggcgaggcca
     2521 tggtggcggc tggggccacc agggctatta ccatggcggt ggtggccgcg gttatggcct
     2581 gccgctggtt ggcgcgcttc tgggcgccgc ggtagtgggt ggtatcatcg catcccagcc
     2641 cgcctacgct cctccgccgg cgtattacgc tccgccgccc gtttattacg cgccgccggc
     2701 atactcatac tacccgcaac cctattacgc ggcgcctggc tactaacggg atcgcatcgc
     2761 gctgcatcag gatgaccgat tccgggtggg atcgttcatc ctgtaggcgt cgacttcccc
     2821 atattgcctc tctccctctg gacgcacg
//
LOCUS       DATAVD010001828         2011 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_920312, whole genome shotgun sequence.
ACCESSION   DATAVD010001828 DATAVD010000000
VERSION     DATAVD010001828.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2011
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_920312"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(70..240)
                     /locus_tag="VHX39_34915"
     CDS             complement(70..240)
                     /locus_tag="VHX39_34915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996392.1"
                     /translation="MSNLRLGSDRGFDFRRLNAMSADLKLIVAAALKDQLTIRSPRSA
                     IAGAVEPFARSP"
     gene            331..>2011
                     /locus_tag="VHX39_34920"
     CDS             331..>2011
                     /locus_tag="VHX39_34920"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEX3996393.1"
                     /translation="MDRLETQHVALWNELEEDFRRKSRVDNDPTFNIDGWNSSYTGLP
                     LSEAEMRAYVSETGALIRTLRPRHVLEIGCGSGLILFQLLPYVDSYVGLDISAANIAD
                     LNRLRNDPALQIACPGLRNLRLYQSSAEDAASYNDERFDTVVMASVIQYFPSDDYLSR
                     TLDRLIARNLSDGGSIFIGDVRSLPLLAQFHASVSAYRSAGVRQETGTTLAAENELAI
                     DPAFFHAMKQRHPRISSVQVMPKRGPCAQEMRNFRYDVTIRTDIASICDTCFAWQAGP
                     RTIETIAEALSSWPATLAYEATPNGRVTPNAIEPDELWALAERQGYDLDLAMRPGDTT
                     GAFDVLLRRRAGLPHPPVDWTRHSIAGAPQSNQPIAAKFHQHLTNLLRQRLETSLPDY
                     MRPMNYAVLDRLPLTAHGKLDRRRLPDIGRSHASEHYVAPTSHHERVLCAAVEEILDL
                     DRVGVTDHFFHSGGDSISSIRLVNLVRTQGLFITPRDVFLNPSIAALARAVRDELVAT
                     TSETEPVGPFKVTPIMAWLLTRGGPWRGFRQCMLVQAPEDLDDDAFVLALQA"
BASE COUNT          401 a          602 c          601 g          407 t
ORIGIN      
        1 ggcgatgggt tggcgcgggg atatcacgcg gacccgacca agacggccac acactttatt
       61 gccgacccgt tagggggacc gggcgaacgg ctctaccgca ccggcgatcg cgctgcgtgg
      121 agaccggatg gtcaactggt ctttcaaggc cgcggcgacg atcagcttaa gatccgcgga
      181 catcgcgttg agccggcgga aatcgaagcc gcgatcgctg cccaacctga gattgctcat
      241 gctgtcgtcg tggcgcggca tgagcgatct gaaccgcggc tcacggcgta tgttgtacct
      301 gccttcgaca gtgacgcgat caggcagatt gtggaccggc tcgagacgca gcatgtcgcg
      361 ctttggaacg agttggagga ggacttccgg cgcaaatccc gggtggataa cgatccgacg
      421 ttcaacatcg atggatggaa cagcagttat accggtctgc cactttcgga agccgagatg
      481 cgggcgtatg tgagtgagac aggggcgttg atacgcacgc tcaggccacg gcacgtgttg
      541 gaaattggct gcggctcagg actgattctg ttccagctgc tgccgtatgt cgactcttat
      601 gtcggtctgg atatttccgc ggcaaacatt gcggatctga accgcctgag gaacgatcca
      661 gcgctgcaaa tcgcctgtcc cgggttacgc aaccttcgat tgtaccagtc cagcgcagaa
      721 gatgctgcct cctataatga cgaacgattc gataccgtcg tcatggcatc cgtcattcag
      781 tattttccca gtgacgatta tctttcgcgt actctcgatc ggctcatcgc gcggaatttg
      841 tcggacggcg gctcgatctt catcggcgat gtgcgcagcc tgccgttgtt ggctcagttt
      901 catgcatcgg tgagtgctta caggtccgcc ggcgtcaggc aggaaactgg aaccacgctc
      961 gctgcggaaa acgaactggc catcgatccg gccttctttc atgccatgaa acagcggcat
     1021 ccccgcatca gcagcgtcca ggtaatgccg aagcgtggac catgcgccca ggagatgagg
     1081 aactttcgct atgacgtgac gattcgcacc gatatcgcat cgatatgcga cacctgcttc
     1141 gcgtggcagg cagggcctcg caccatcgaa acaatcgcgg aagccctttc ctcatggcct
     1201 gccacgcttg cctatgaagc cacgccgaat ggacgcgtta cgccaaacgc catcgagccc
     1261 gacgaactat gggcgctcgc ggaacgccaa ggctatgacc tcgatctggc gatgcggccg
     1321 ggggacacca caggcgcgtt cgacgttctg cttcgccgcc gagcgggtct ccctcacccg
     1381 ccggtcgact ggacaaggca ttcgattgct ggtgctccgc aatcgaacca accgattgca
     1441 gcgaagttcc accagcacct gacaaacctg ttacggcaac ggcttgaaac ctctctgccg
     1501 gattacatga ggccgatgaa ttacgcggta ctcgatagat taccgctcac cgcgcacggc
     1561 aagctcgacc gtcggcgcct gccggacatt gggcgatcgc acgcctctga gcactatgtc
     1621 gcgcccacat cgcatcacga acgggtgttg tgtgccgccg tggaggaaat cctcgatctc
     1681 gatcgtgtcg gagtgacgga tcatttcttt cacagcggcg gtgacagcat ttcgtcgatt
     1741 cggctggtga atctggtacg cacgcaaggg ctgttcatca cgccgcgcga tgtgtttctc
     1801 aatccgagca ttgctgccct ggcgcgggcg gtacgggacg aactcgtggc caccacttcg
     1861 gaaacggaac ccgtcggtcc gttcaaagtc actccaatca tggcctggct actgaccagg
     1921 ggtggcccat ggcgcggctt ccgacagtgt atgctggtac aagcgccgga ggacctcgac
     1981 gacgacgctt tcgtgctggc cctgcaagcg g
//
LOCUS       DATAVD010001829         3492 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_357585, whole genome shotgun sequence.
ACCESSION   DATAVD010001829 DATAVD010000000
VERSION     DATAVD010001829.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3492
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357585"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..457
                     /locus_tag="VHX39_34925"
     CDS             <1..457
                     /locus_tag="VHX39_34925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HEX3996394.1"
                     /translation="WLYRLTHTINTIPSLYLEAGAMHGAVLCWRDEPLVYMEDVGRHN
                     AVDKIAGHMHCHGISAADKIFYTTGRLTSEMVIKTVRMGIPILVSRSGFTAWGVELAR
                     NAGLTLIGRARGKRFLALACPERITFDQSLDYVAEESARHHRKSADDDG"
     gene            444..1091
                     /gene="mobA"
                     /locus_tag="VHX39_34930"
     CDS             444..1091
                     /gene="mobA"
                     /locus_tag="VHX39_34930"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase MobA"
                     /protein_id="HEX3996395.1"
                     /translation="MMTADPATANPATIGAILAGGLARRLGGGDKTLRQVGGDTVLAR
                     LIERLRPTVTRLIINANDNPERFAAHGLPIVPDTLPDHPGPLAGVLAALDWTAASEPS
                     VAWVVTAPGDAPFLPKDLVTRLHEACRREGAQLACAGSLGRTHPVVALWPVSIRHELR
                     QVLTERGIRRIDRFTEPYKRAVVEWNATPVDPFFNVNTPEDLAEADRLVRTWPDL"
     gene            complement(1096..2343)
                     /gene="glp"
                     /locus_tag="VHX39_34935"
     CDS             complement(1096..2343)
                     /gene="glp"
                     /locus_tag="VHX39_34935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HEX3996396.1"
                     /translation="MAQLSDDCFAFGGELLTVDAALRAIATIDCVSTTEFVPLDAADS
                     RVLAEDVIAPVDLPPFDNAAVDGYAVRLADVRDAGVLPVEGRVVAGAPVAVPLKPATA
                     RRIFTGAALPVGADTIFMQEDVRLDDEGRVHLPSGLKPGANTRPRGEDIVAGARALRK
                     GQILRPQHLALAAALGIAKLAVRTPIRIALFSTGDELVEPGMPAGASQRNDSNRVLLT
                     ALARRAGAHVTDLGILSDRRNVIAAALAEAAHGHDLILTSGGVSVGEEDHVRAAVEAD
                     GRLTFWRLAIKPGRPVAMGTVAGTPFVGLPGNPVAAFITFVHVARPLIGALAGASVEP
                     PARFAVCAAFSYRKKAGRREYVRVQIERGADGLLVAHKHPVEGAGILTSLTETAGLVE
                     LPETVTRVTPGDTVLYLPYELLV"
     gene            complement(2368..2907)
                     /gene="mobB"
                     /locus_tag="VHX39_34940"
     CDS             complement(2368..2907)
                     /gene="mobB"
                     /locus_tag="VHX39_34940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HEX3996397.1"
                     /translation="MTDGHDPSTRVIGLAGWNGAGKTTLLERLIPALIARGLRVSTLK
                     HAHHAFDIDRPKTDSWQHRQAGANEVLTVSPKRWALQHELSDEPEPALPALLGRMARV
                     DVVLIEGFKREAHPKIEVHRSANGKPPLYPDDPTIVAVVSDAAFPGLALPLLHLDDVI
                     SVADMVQSCARPMDEIDWC"
     gene            complement(2989..>3492)
                     /locus_tag="VHX39_34945"
     CDS             complement(2989..>3492)
                     /locus_tag="VHX39_34945"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEX3996398.1"
                     /translation="FEPVAMTGGNLNHNRIAFNIHRTLHRGLRESVCEPLGLDAGVAT
                     VGDTVRYPDAVVTCSPAQGGSRLVPDPVVIFEVISPTSGHVNRIVKVREYAAVDSIRR
                     YVIVESASVVVTVHERQAAGQKWTVTTVMADDLLSLPEIGVEFPVGEICEDVDFQSLA
                     SEAYTSP"
BASE COUNT          628 a         1100 c         1130 g          634 t
ORIGIN      
        1 atggctctac cggctgaccc acacgatcaa cacgatcccg tcgctgtatc tcgaagcggg
       61 ggcgatgcat ggggcggtgc tttgctggcg cgatgagccg ctggtctaca tggaagacgt
      121 cgggcgccat aacgcggtgg acaagattgc cggacacatg cactgccacg gcatctccgc
      181 cgccgacaag atcttctaca ccactgggcg tttgacatcg gagatggtga tcaaaaccgt
      241 gcgcatgggt attcccatcc tggtgtcgcg ctccggcttc accgcttggg gtgtcgaact
      301 ggcgcgcaat gccgggctca ctctgatcgg gcgcgcgcgc ggcaagcggt tcctggcgct
      361 ggcctgtccc gagcgaatca ctttcgatca aagcctggac tacgtcgccg aggaaagtgc
      421 gaggcatcac cgcaagtcgg cggatgatga cggctgaccc cgcgacagcc aatcccgcga
      481 ccattggggc gatcctggcg ggaggcctcg cgcgccggct tggcggtgga gacaagacct
      541 tgcggcaggt tggcggcgac accgtcctgg cgaggctgat cgagcggctg agaccgactg
      601 tgacgcggtt gatcatcaac gccaacgata accccgagcg gttcgcggcc catggcctgc
      661 cgatcgttcc agacaccttg cctgatcatc cgggtccact cgccggagtt ctcgcggcgt
      721 tggattggac tgcggcgtcg gagccgtcgg tcgcctgggt tgtgacggcg ccaggcgacg
      781 caccatttct gcccaaagac cttgtcacac ggttgcacga ggcatgccgg cgcgagggcg
      841 ctcagctagc ctgtgccggg tccctcggcc gcacgcatcc agttgtcgcg ctgtggccgg
      901 tctcgatccg gcacgaactg cggcaggtcc tgacggagcg ggggattcgc cggatcgacc
      961 ggttcaccga accttataag cgggcggtgg tggagtggaa cgccacgccg gtcgatcctt
     1021 tcttcaacgt caatacgccg gaggatcttg cggaagcaga tcgcctggtg cggacctggc
     1081 ccgacctctg accggtcaca ccagcagttc gtagggcaga tagagcacag tatcgcctgg
     1141 cgtcacccgc gtgaccgtct cgggaagttc caccaaaccg gcggtctcgg tgagcgaggt
     1201 caggataccg gcgccctcga ccgggtgctt gtgcgccacc agcaagccgt cagcgcctcg
     1261 ttcgatttgg acccgcacgt actcgcggcg tcccgccttt tttcggtagc tgaacgcggc
     1321 gcacacggca aaccgtgccg ggggctcgac gctggcacct gccaaagccc cgatcaaagg
     1381 gcgtgcgacg tgcacgaagg tgatgaacgc ggccaccggg ttgccgggca gcccaacgaa
     1441 tggcgtaccg gcgacggtcc ccattgcgac cggacgaccc ggcttgatcg ccagccgcca
     1501 gaaggtcagc cggccgtctg cctcgaccgc tgctcggaca tggtcctcct cgcccacgga
     1561 aacgccaccg gaggtcagga tcaaatcgtg gccgtgcgcc gcctcggcca gtgcggcggc
     1621 gattacgttg cggcgatccg aaagaatgcc aaggtcggtg acatgcgcac ccgcgcgacg
     1681 cgccaacgcc gtcagtagga cgcggttcga gtcgttgcgc tggctggctc cggccggcat
     1741 cccgggttcg acgagttcgt cgccagtgga gaacagtgcg atccggatag gcgtccgcac
     1801 cgcgagcttt gcaatcccca gcgcggccgc cagggccaga tgctgtgggc gtaagatttg
     1861 cccctttcgc aacgctcggg cgccggcgac gatgtcttcg cctctggggc gtgtgttggc
     1921 acctggtttc agacccgagg gcaggtgaac ccggccctcg tcgtccaggc gcacgtcctc
     1981 ctgcatgaag atcgtgtccg ctccaaccgg cagtgccgcg ccggtgaaga tacggcgggc
     2041 ggtggccggc ttcagtggta cagcgaccgg cgcgccggcg acaacgcgac cttctaccgg
     2101 aagcacacca gcatcacgca catcggccag acgcaccgca tagccgtcga ccgcggcatt
     2161 gtcgaagggc ggcagatcga cgggagcaat cacgtcctcg gccagtacgc ggctgtcggc
     2221 cgcgtccagt ggcacgaatt cggtggtcga gacacaatcg atcgtcgcga tggcgcgcaa
     2281 agccgcatcc accgtgagca actcgccgcc gaaggcgaaa cagtcgtccg agagttgtgc
     2341 catccgtgtc ctgtcagtcg gagattgtca gcaccagtct atctcgtcca tggggcgtgc
     2401 gcacgattga accatatcgg cgacgcttat gacatcgtcg agatgtagca acggcaacgc
     2461 caggccgggg aacgcagcat cggaaacaac tgccacgatc gtcggatcgt cgggatacag
     2521 gggtggtttt ccgtttgccg aacgatgcac ttcgattttt gggtgggcct cgcgcttgaa
     2581 cccttcgatc agcacaacgt cgaccctggc catccggccc agcaaagccg gtaacgcggg
     2641 ctcgggctcg tcggataatt cgtgttgtag agcccaacgt ttcggtgaca cggtcaatac
     2701 ctcgttcgca cctgcctgac ggtgttgcca tgaatcggtt tttggccggt cgatgtcgaa
     2761 ggcgtggtgg gcgtgcttta aggtcgagac acgcagtcca cgtgcgatca gcgcgggaat
     2821 gaggcgttcc agcagtgtgg tcttgccggc gccattccaa cccgccaggc cgatcacacg
     2881 cgtggacggg tcgtgtccgt cggtcattga gaaccctcgc ctccgtcggg tgtgaaaggt
     2941 cgatgacgtg cgtggtaggt acatcctccg caactgccgg aatgtgcctt acggtgaggt
     3001 gtatgcttcg gatgccagcg actggaaatc gacatcctca cagatttcgc cgaccgggaa
     3061 ttcgacgccg atttccggta gggacagaag atcgtccgcc atcaccgttg tgacggtcca
     3121 tttctgtccc gcggcctgcc gttcatggac cgttacgacg acgcttgctg attcaacgat
     3181 gacatagcgg cggatcgaat cgactgcggc gtactcgcgg actttgacga tccggttaac
     3241 atggccggac gttgggctga tgacttcgaa aatcacaaca gggtccggta ccagccggct
     3301 tccgccttgc gccggcgaac atgtcaccac ggcatcagga taacggacgg tatcgccgac
     3361 cgtcgcgacg ccggcgtcaa gcccgagtgg ctcgcagaca ctctccctga gccctcggtg
     3421 gagagtcctg tggatattga aggcgatgcg attgtgattg aggtttcccc cggtcatcgc
     3481 cacgggctca aa
//
LOCUS       DATAVD010001830         2413 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2035157, whole genome shotgun sequence.
ACCESSION   DATAVD010001830 DATAVD010000000
VERSION     DATAVD010001830.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2413
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2035157"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..1041
                     /locus_tag="VHX39_34950"
     CDS             136..1041
                     /locus_tag="VHX39_34950"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEX3996399.1"
                     /translation="MLMQFRAVPLVMAALLLIAADAPPDTGLVAQRGDVRLTGAELQD
                     VLSLLDPAARAQVTATQQILANFTRERVLNMAILAEATARKWDSQPDVVRKIAEARNA
                     VIAQTYLASLVPPDPAFPTDAEVASAYEANKARLVMPRQYHLAQIVLTVKPGATPQED
                     EEVHKKAVGLRSQAVRPNADFADLARKASQDPQSAEKGGDVGWLQEPNMIPAVRDVVS
                     GMIESGISQPVRVQDGWHILKLLAMKPAGALSLQDARPQIVAALRQARTQRLVRAYLD
                     DMLKKQPIQLNEIELSKVASEAPGK"
     gene            complement(1060..1452)
                     /locus_tag="VHX39_34955"
     CDS             complement(1060..1452)
                     /locus_tag="VHX39_34955"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEX3996400.1"
                     /translation="MADSPRREAGRAMRRKLMGDAYANKLDGSVYRDPIMEKFAEVTQ
                     ETIFGTLWTRPGLDLKTRALICVISDTATGRYEELKLHLRFARNHGWTEDELSEALLH
                     LTGYIGAPLVRGAMLTAVELFKEMQTEG"
     gene            complement(1474..1887)
                     /locus_tag="VHX39_34960"
     CDS             complement(1474..1887)
                     /locus_tag="VHX39_34960"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEX3996401.1"
                     /translation="MARHVVAAVGEIPPGGKKVVNPAGREICVFNVNGEHYALINRCP
                     HEGAALSYGPVLGCFESKRPGEYRLTRQGEMLRCPWHGWEFDIRTGQSWCHPESVKAR
                     TYKVEVVPGELLAKGPFVAETVQVEVDGEYVVVEL"
     gene            complement(1896..>2413)
                     /locus_tag="VHX39_34965"
     CDS             complement(1896..>2413)
                     /locus_tag="VHX39_34965"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3996402.1"
                     /translation="GFPIALHLGGTSGHPSTGGGWPSFYHEDHPSYPQSKEALVTSLV
                     TEGVFEHLPNLRVALVEGGFAWLPSLSWRLDKHFLRFRDEVPHLKMLPSEYIRQNIWV
                     TTQPIEEPEHPADLITTCEWIGWDRIMFSTDYPHWDQDDPRYAFKVPLPEQEKRMLYR
                     DNALSFYNLAA"
BASE COUNT          445 a          762 c          754 g          452 t
ORIGIN      
        1 acatgctcct ggctcagcca cgaaaagcca ctgtcggccg ggatggtggt gaggtttttc
       61 tctgtcggcg gcgtgctatg agggcccgcc cgcttgcgga cattcgccct tcggcagcac
      121 gggaagcctc gcctcatgct catgcaattt cgtgctgttc cgctcgtgat ggcggccctg
      181 cttctgatcg cggccgatgc cccgccggat accggcctgg tagcgcaacg aggcgacgtg
      241 cgtctcaccg gcgcggagtt gcaggatgtg ctgagtttgc tcgacccggc cgcgcgggcg
      301 caggtgaccg cgacgcaaca gatcctggca aactttaccc gtgagcgggt gctcaatatg
      361 gcgatcctcg ccgaagcgac cgcgagaaag tgggacagcc agccggacgt cgtccggaag
      421 attgccgagg cacgcaatgc cgtgatcgcc caaacctacc tcgcctcgtt ggtgccgccc
      481 gatcctgcat tccccaccga tgccgaggtc gcttccgcgt atgaggccaa caaggctcgg
      541 ctggtcatgc cgcggcaata ccacctggcg cagatcgtac tgaccgtgaa gcccggcgcg
      601 acacctcagg aagacgaaga ggtccacaag aaagcggtgg gtctgcgcag ccaggcggtt
      661 cgcccgaacg cggatttcgc agaccttgcg cggaaagcct cgcaggaccc gcagagtgcg
      721 gaaaagggcg gcgacgtcgg gtggttgcag gagcccaaca tgatcccggc ggtgcgcgac
      781 gtcgtttcgg gtatgatcga gagcggcatc agccagccgg tacgggtgca ggacggctgg
      841 cacatcctga agttgctggc gatgaagccg gccggagcgc tgtcactgca agatgcgagg
      901 ccgcagattg tcgccgcgct gcgccaggcg cgcacccagc ggctggtccg cgcctatctg
      961 gacgacatgt tgaagaaaca gccgatccaa ttgaatgaga tcgagctctc gaaggtggca
     1021 agcgaggcac ccgggaagta ggtgccagca gcctcccgcc tacccctctg tctgcatctc
     1081 cttgaacagt tccactgccg tcagcatcgc gccgcgcacc aaaggcgcac cgatgtagcc
     1141 ggtcaggtgc agcagtgcct cggacagttc gtcctcggtc cagccgtgat tgcgcgcgaa
     1201 gcgcaaatgc agcttcagtt cctcgtagcg gccggtggcg gtgtccgaaa tgacgcagat
     1261 cagcgctcgc gttttcagat caaggccggg tcgcgtccac aacgtgccga aaatggtctc
     1321 ctgggtgacc tcggcgaact tctccatgat cgggtcgcga tacaccgaac cgtcaagttt
     1381 gttcgcgtag gcgtcgccca tcagcttccg ccgcatcgcg cggcccgctt cacgtcgggg
     1441 actgtcggcc atgttctgtt tcctctcttg ttgtcagagt tcgaccacga cgtactcgcc
     1501 gtcgacttcc acttgcacgg tttccgcaac gaacggacct tttgccagca actcgcccgg
     1561 cacgacctca actttatagg tgcgcgcttt gacactttcg ggatggcacc aggattgacc
     1621 ggtcctgata tcgaattccc agccatgcca cgggcaacgc aacatttcgc cttgccgggt
     1681 cagtcggtat tcccccggtc gcttcgactc gaagcagccg agtacgggac cgtaactcag
     1741 cgcagccccc tcgtgcgggc aacgattgat cagcgcgtaa tgttcgccat tgacattgaa
     1801 cacgcagatc tcgcggcccg ctgggttcac aaccttcttg ccgccgggcg ggatttcgcc
     1861 aaccgcggcg acgacgtgac gagccatcga cgccgtcagg ccgccaggtt gtagaacgat
     1921 agcgcgttgt cccgatacag catgcgcttt tcctgctccg gcagcggcac tttgaaggcg
     1981 tagcgcggat cgtcctgatc ccagtgcgga tagtcggtcg agaacatgat gcgatcccag
     2041 ccgatccatt cacaggtcgt aatcaggtct gccggatgtt ccggttcctc gatcggttgc
     2101 gtcgtgaccc agatattttg ccggatgtat tcggacggca acatcttcag atgcggcacc
     2161 tcgtcgcgga agcggaggaa gtgtttgtcc aggcgccagc tcagtgacgg cagccacgcg
     2221 aacccgcctt caacgagggc cacgcgcagg ttggggaggt gttcgaacac gccctcggtg
     2281 acgaggctgg tgaccagcgc ctctttcgat tgcggatagg acggatggtc ctcgtgatag
     2341 aacgacggcc agccaccgcc ggtcgaggga tgaccgctgg tgccgcccag atgcaacgcg
     2401 atcgggaagc cgt
//
LOCUS       DATAVD010001831         2170 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1661277, whole genome shotgun sequence.
ACCESSION   DATAVD010001831 DATAVD010000000
VERSION     DATAVD010001831.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1661277"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..978)
                     /locus_tag="VHX39_34970"
     CDS             complement(<1..978)
                     /locus_tag="VHX39_34970"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing diguanylate cyclase"
                     /protein_id="HEX3996403.1"
                     /translation="MQPANSISVSQTSAETLAALLISSNLIALALADHDRLLFVNAAF
                     RRLFDHAGGLTGVSILDLLLPAHREQVGTALRAANSAPPLCVAEAFRGETKTFELELR
                     FEQAMCDGTPLLAIFAQDVTDRYRVEAQLNLLAFSDPLTGLGNRAMFADRLRHAMLLA
                     RRTRQSFAVLALDLDNFKPVNDRHGHAAGDLVLQRIAARLLACLRDTDTVVRLGGDEF
                     AMLIPNLAARADAMTTANRLIALAKQPIGFGKLALRVGASIGIAICPEHANTVDHLLA
                     AADRALYVAKRRGRGRAVWATEAAVSEVMPAPLVWNVAHEIGIREIDDQH"
     gene            complement(1245..2096)
                     /locus_tag="VHX39_34975"
     CDS             complement(1245..2096)
                     /locus_tag="VHX39_34975"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEX3996404.1"
                     /translation="MIPPLPELRFLPIPEASRSRYLGDRFSYMEAGAADAPPLLLLHG
                     VGANAMHWRFQFADLSDRFRVIAWNAPGYMLSDNLLTESPEGRDYAAAFVDFLDAVEV
                     ARCDLLANSFGSRIAQCVAWFHPGRIARMVLTGTAIGQRDMAEESRAKLIAARQVQVA
                     GGGYGFGARAKALVGPDASEQTLAMIQHVLRATNTDGFMRAVRFLASNTYTPDFAARL
                     TMPMLLIQGEADAVTPLESNAAVLARALPHARLEVLPRTGHLPEVERWETVNQLLQDF
                     LTFSGQV"
BASE COUNT          463 a          692 c          641 g          374 t
ORIGIN      
        1 gtgctggtcg tcgatttcgc gaatgccgat ctcatgcgcg acgttccaga ccagcggcgc
       61 cggcatgact tccgagacgg cggcctcggt agcccaaacg gcacgccccc gaccgcgccg
      121 tttggccaca taaagtgcgc ggtcggccgc ggcgagcaaa tgatcgacgg tatttgcatg
      181 ctccggacag atcgcaatgc caatactggc gccgacccgc agcgccaatt tgccgaaacc
      241 gataggttgc tttgccagcg cgatcaaccg attggcggtg gtcatcgcat cggcgcgagc
      301 cgcgaggttg ggtatcagca tggcgaattc gtcgccgccc agacgcacga cggtgtcggt
      361 atcgcgcagg caggccagta atcgcgcagc aatgcgctgc agtacaaggt cgcccgcagc
      421 gtgcccatgg cggtcattga ccggcttgaa attatccaga tccaacgcaa gcaccgcaaa
      481 ggattgccgg gttcggcgtg caagcagcat ggcgtgacgc agccggtcgg caaacatggc
      541 acggttgcca aggccggtca gcggatctga gaatgccaac aaattcagtt gcgcctcgac
      601 ccgataacgg tcggtcacat cctgtgcgaa aatcgccagc agtggggtgc catcgcacat
      661 cgcctgctcg aaccgcaatt cgagttcgaa ggtcttggtt tcaccacgga acgcctccgc
      721 gacgcacagc ggcggagcac tgtttgccgc ccgcaaagcg gtgccgacct gctcacgatg
      781 cgccggcaac aacagatcga ggatcgacac accggtcagc ccaccggcgt ggtcgaacag
      841 acggcgaaac gcggcgttga cgaacagcag gcggtcgtga tcggccaatg ccaacgcgat
      901 cagattgctg ctgatcagca gagcagccaa tgtctcggca ctggtctgcg agacggatat
      961 cgagtttgca ggttgcatga cgtctttcca ggcaaggctg ccattgtcag ggtccggaac
     1021 cgactctgag cggcggcaca atcctcatcg caccggcgtc ttaccatttg gttaacggcc
     1081 gtgatcaaag accgcttacc cgaccttcgt ctgcgataag cgcgcgcggc aatcgatagc
     1141 gccgacgcag ctttggttgt gcaataattg caatatttgc ataattccgc tgtcgaggtt
     1201 gtcccaggta aactgctgaa cgttccaaaa caccgtgcga cgtgtcaaac ctggcctgag
     1261 aacgtgagaa aatcctgcag caactggttg acggtttccc accgttcgac ctccggcaaa
     1321 tgaccggttc tcggtaaaac ttccagccgt gcatgcggca atgcgcgggc caggactgcg
     1381 gcgttgcttt ccagcggggt aaccgcatcc gcctcaccct ggatcagcag catcggcatc
     1441 gtcagccgcg ccgcaaagtc gggcgtataa gtattcgacg ccaaaaaccg aacggcgcgc
     1501 atgaacccgt ccgtattggt ggcacgcagc acgtgctgga tcatggcaag cgtctgttcc
     1561 gacgcgtccg gcccgaccag cgccttggct cgcgctccga agccataccc gcccccggcc
     1621 acctgaacct gacgcgccgc gatcaatttt gcccggcttt cctccgccat gtcgcgttga
     1681 ccaattgccg tgccggttaa gaccatccga gcgatccggc ccggatgaaa ccatgccacg
     1741 cattgagcga tacgggaacc aaacgaattc gccagcaggt cgcaccgggc gacctccacg
     1801 gcgtcgagga aatccacaaa ggcagccgcg taatcccggc cctccggcga ttcggtcagc
     1861 agattgtcgc tgagcatata gcccggcgca ttccaggcga tcaccctgaa gcggtcgctc
     1921 agatcagcga actgaaaccg ccagtgcatc gcattggcgc cgacgccatg cagcaacagc
     1981 aaaggcggcg cgtccgccgc gcccgcctcc atgtagctga accggtcacc cagataacgc
     2041 gaacgggagg cttccgggat cggcagaaag cgcaattcgg gcaatggcgg gatcatgccg
     2101 gatcgttaat gatcgcaacg gcgcgggtcc atcccgcgga accgcggtgc actttcaccg
     2161 ggaagcacac
//
LOCUS       DATAVD010001832         3573 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1289587, whole genome shotgun sequence.
ACCESSION   DATAVD010001832 DATAVD010000000
VERSION     DATAVD010001832.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3573
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1289587"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1382)
                     /locus_tag="VHX39_34980"
     CDS             complement(<1..1382)
                     /locus_tag="VHX39_34980"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEX3996405.1"
                     /translation="MILSRLRIIALWLAGLLVSGAVIVNTRFSTDMSAFLPRSPNPAQ
                     QILVDQLREGVVSRLILLAIEGADPDTLATLSKAIARDLRTSPGFGIVNNGEAATFAR
                     DRDVLWRNRYLLSPDVTSQHFTAAALHADLETDLNMLNSDLGMLAARTIPADPTGEML
                     HLLDGLSSGSQHPETYAGVWMSPDHTQALLMVQTLAAGFDLNAQQQAIGQIETAFAAA
                     RKDVAAAGRAQLLESGPPVFAVQTRARMKQDVTRLSLIATVLVAAILVLAYRSARVLV
                     LALLPVLSGITVGIAAVSLSFGFVHGITLGFGVTLIGEAVDYAIYLFTQTAQGTAPVA
                     TLRQIGPTLRLGMLTSVCGFSAMLFSSFTGFAQLGLFTIAGLLVALAVTRFVLPALLP
                     AQSPFRGATLFAVPLLALMRHAKTARLAVLALTLIAAIALVLHKGPYWETEIAGMSPI
                     PAAQKSLDER"
     gene            complement(1379..1981)
                     /locus_tag="VHX39_34985"
     CDS             complement(1379..1981)
                     /locus_tag="VHX39_34985"
                     /inference="COORDINATES: protein motif:HMM:NF039988.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LolA-related protein"
                     /protein_id="HEX3996406.1"
                     /translation="MASLVRLSCASCIAAMLSVTELPAQPGATAPEWSLATLMTAMHQ
                     VRSSTARFVEVRYLHLLSQPQQSSGTLLYVAPNYLQKTTTEPAASRLTISGDRLTIEQ
                     QGQPNRAIALQDYSEIGTLVDSTRAILAGDLPALTRSFTTTFAGGPDGWSLTLEPRET
                     KLRDIVASIQVQGVRDTIRDVLTQQADGDRTDMAVTPNPQ"
     gene            complement(2013..2474)
                     /locus_tag="VHX39_34990"
     CDS             complement(2013..2474)
                     /locus_tag="VHX39_34990"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3996407.1"
                     /translation="MAHTIVAVSDRPELASIVATWLIAEFGYPGGRTVEELTARILEP
                     PTGPEETFVLFDQDRPVGTASLAHDDLASRRDLTPWLAGVFVEPAYRGRGYATLLVRQ
                     VEAFASAASVATLWLHTWTAESLYARLGWERMGTETNRGDETVLMSRRLSD"
     gene            complement(2562..2789)
                     /locus_tag="VHX39_34995"
     CDS             complement(2562..2789)
                     /locus_tag="VHX39_34995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996408.1"
                     /translation="MPLVTQHIYRSANGDHWSLMTDTSSGRKFVRHQANLSSGGHLTD
                     TDVDDFLQIGGSGPEFAALRQLIEQSPDDPA"
     gene            2914..3336
                     /locus_tag="VHX39_35000"
     CDS             2914..3336
                     /locus_tag="VHX39_35000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996409.1"
                     /translation="MTWTRITDQDEAIDLLPAWLGRRLIGLHGKFGLLLATGDVLRIT
                     SIGAVHLSSEGLVLLDVSLDQPGVPDGVDLAWQSKLFLGAPVPGATAATVNLAHVVAA
                     VEFVDTVSVEPPDESNAPSAAEVVAELARITTEIGEPI"
BASE COUNT          730 a         1047 c         1109 g          687 t
ORIGIN      
        1 aaccgctcat cgagcgactt ttgtgcggcg ggaattgggc tcatgccggc aatttcggtt
       61 tcccagtagg gacccttgtg caaaacgaga gcgattgcgg cgatcagagt cagtgccagc
      121 acggcgagcc gggcggtttt ggcgtggcgc atcaacgcca gcagcggcac ggcaaatagg
      181 gtggcgccgc gaaacggcga ttgggcgggc agcaatgcgg gcaatacaaa tcgcgtgacc
      241 gccagtgcaa ccagcagtcc agcgatggtg aacagaccca gttgggcgaa tcccgtaaaa
      301 ctcgagaaca acatggcgct gaaaccgcaa accgacgtca gcatgcccag gcgcaaggtc
      361 ggtccgattt ggcgtagcgt ggcgaccggt gccgtgccct gcgcggtctg tgtgaacaaa
      421 taaatcgcgt aatcgaccgc ttcaccgatc aaggtgaccc cgaaaccgag cgtgatgccg
      481 tggacgaaac caaagctcag actgacggcg gcgatgccga cggtgatgcc gctgagcacg
      541 ggcagcagtg ccagcaccag aacgcgcgcg gaccggtaag cgagcaccag aattgccgcg
      601 accagcaccg tggcgatcag cgacaaccgc gttacgtcct gcttcatgcg cgccctggtc
      661 tgcaccgcga acaccggcgg tccgctttcg agcaattgtg cccggcctgc ggcagcaacg
      721 tccttgcgag ccgcagcgaa cgcggtctcg atctggccga tcgcctgttg ctgggcgttg
      781 aggtcgaacc cggccgccag cgtttgcacc atcagcagcg cctgcgtgtg gtcgggcgac
      841 atccagacgc cggcgtacgt ttccggatgc tgcgacccgg agctgaggcc gtccagcaag
      901 tgcagcatct cgccggtggg atctgccggg atcgtgcgcg ccgccaacat gccgagatcg
      961 gagttgagca tgttcaggtc ggtctcgaga tcggcgtgca gtgcggcggc ggtaaaatgc
     1021 tggctggtta cgtcggggct gagcaagtaa cgatttcgcc atagcacgtc gcggtcgcgc
     1081 gcaaatgttg cggcttcgcc gttgttcacg atgccaaagc caggtgaggt gcgcaggtcc
     1141 cgggcgatcg ctttgctcag cgttgccaga gtgtccggat cggcgccctc gatggccagc
     1201 aggatcagcc gcgataccac tccctcacgc aactgatcga ccaggatctg ttgtgccggg
     1261 ttgggcgagc gcggcaaaaa ggccgacata tcggtgctga aacgcgtgtt gacgatgacg
     1321 gcaccactga cgagcagacc ggccagccaa agcgcgatga tacgaaggcg actcaggatc
     1381 attgcgggtt gggtgtcacg gccatatcgg tccgatcgcc gtcggcttgt tgcgtcagga
     1441 cgtcgcggat cgtgtcccgc acgccttgaa cctgtatcga cgccacgata tcccgcaact
     1501 ttgtttccct gggctccaga gtcaggctcc aaccatccgg gccaccggca aatgtggtgg
     1561 taaacgaacg ggtcagcgcg ggtaggtctc cggcgaggat tgcccttgtg ctgtcgacca
     1621 acgtgccgat ctctgaatag tcctgtaatg caatggcacg atttggttga ccttgttgct
     1681 cgatggtcag gcggtcgcca ctgatggtca ggcgcgaagc ggccggctcg gtagtggttt
     1741 tttgcaggta gttcggggcg acatagagca acgtaccgga agattgttgc ggctggctga
     1801 gtaggtgcaa ataccgcact tcaacgaagc gcgcagtcga cgagcgcacc tggtgcatag
     1861 cagtcatcag ggtcgccaat gaccactccg gcgccgtcgc gccaggctgt gccggaagct
     1921 cggtcacaga cagcatcgcg gcgatgcacg atgcacaact cagtcggacc agacttgcca
     1981 cgcgaatcac attcaagagg ctcttggtga catcagtcag acagtcgccg tgacatcaat
     2041 accgtctcgt ctcctcgatt ggtttccgtc cccatacgtt cccagccaag ccttgcgtag
     2101 agggattccg ctgtccaggt gtgaagccat aacgtagcaa ccgaggcggc cgacgcaaac
     2161 gcctctacct gtcgaaccag cagagtcgca taacctcggc cacgatacgc cggttcgaca
     2221 aacacgcctg ccagccatgg cgtcaaatca cggcgtgatg ccaaatcatc gtgcgccagg
     2281 ctcgcggtcc ctacgggcct gtcctgatca aacagaacga atgtctcttc cgggccggtt
     2341 ggcggttcca gaatcctcgc agtcaattcc tccaccgttc gcccgcctgg atagccaaat
     2401 tcggcaatca gccacgtcgc gacgatggaa gccaactcgg gtcgatccga aactgcgaca
     2461 atcgtatggg ccatcggtca atcgttcctc caggctggga taattcagtg atttaatggt
     2521 cggcaaccaa cacggctccg gggtgtctgc aaatcctgga gctacgccgg atcgtcaggg
     2581 ctctgctcga tcagttgacg caaggcggcg aattccggac cggagccgcc aatttgcaga
     2641 aagtcgtcga catccgtgtc ggtcaggtgc cctccggacg ataaattcgc ctggtgcctg
     2701 acaaattttc gccctgacga cgtgtcagtc atgagtgacc aatggtcccc gtttgcgctc
     2761 cggtagatgt gctgcgttac gaggggcatg gaacagactc cttgcatgaa aattagattt
     2821 gtggaggctc ttgccgagcg gggtgcacga gaggcttcca tccccgcgca ttcggcgacg
     2881 gccagaccat gcatgatagc ggagtaccgg acattgacat ggacgcgcat cacggatcaa
     2941 gacgaggcga tcgatttgtt gccggcgtgg cttgggcgac gcctgatcgg gctacacggc
     3001 aaattcggat tgctgctggc gaccggagac gttttgcgga tcacctccat tggtgcggta
     3061 catctctcgt cggaaggact tgtgctgttg gatgtctcgc tcgatcaacc gggggtgcct
     3121 gacggcgtcg atttggcgtg gcaatcaaag ttgtttcttg gagcaccggt gccgggagcg
     3181 actgcggcaa cggtgaacct cgcgcatgtc gtggcggccg ttgaattcgt cgatacggta
     3241 tcggttgaac ctccggacga aagcaacgca ccttcggcag cagaggtggt cgccgagttg
     3301 gcacgaatta cgacggaaat tggcgaaccg atataacgca cgttcggagg ctggcggcag
     3361 cgctccgatc ggctgcgcca aggttgatgg atcgccggac cgttcggtct ggcgtccata
     3421 catgacgcat taatattgca ggccactggt catgcgttcc gttcatcccc agaactcata
     3481 aaaattgaac caattgtacg gcgccgaccg gcaataatgc tccaatcgcg caacgtatcg
     3541 ccgcatcatc gcctcgatcg cgtgatccgt atc
//
LOCUS       DATAVD010001833         1816 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3713106, whole genome shotgun sequence.
ACCESSION   DATAVD010001833 DATAVD010000000
VERSION     DATAVD010001833.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3713106"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..711)
                     /locus_tag="VHX39_35005"
     CDS             complement(<1..711)
                     /locus_tag="VHX39_35005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008616242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HEX3996410.1"
                     /translation="MTKAVRVHKVGGPEALVYEAVDVPAPGQGEVHIRQHAVGLNFID
                     VYFRTGLYKAPGLPFVVGNEAAGEVLSVGPGVTNFHPGDRVAYYANLGGYASERNIPA
                     ERLVKLPDHITYEQGAVLMLKGLTVWYLLHKTFKVEPHHRVLIHAAAGGIGLLACQWA
                     RALGAHVIGTVGSKAKADLALANGCDHVILYNEEDFVARVKQISRNELCDVVYDGVGK
                     TTFPGSLSCIKPRGLFVSF"
     gene            complement(776..1528)
                     /locus_tag="VHX39_35010"
     CDS             complement(776..1528)
                     /locus_tag="VHX39_35010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEX3996411.1"
                     /translation="MIDLWTSPEAWAALLTLTALEIVLGIDNVIFLSVIVSRIPARQA
                     KRARQIGLALALVFRIVLLSLLVWLIGLTQDVLTVKGMGFSWRDIILIGGGLFLIAKA
                     THEIHGEVEARDEDDDAAPRSSAFFWIIIQIVIIDMVFSLDSIITAIGMAQDLEIMIA
                     AVVIACFIMYVSSGPVARFVAEHPTTKMLALAFLVLIGVALVADGFKFHIPRGYIYFA
                     IAFSVAVEFFNVLAKRNRRKHVSQPGRRSRGH"
     gene            complement(1525..>1816)
                     /locus_tag="VHX39_35015"
     CDS             complement(1525..>1816)
                     /locus_tag="VHX39_35015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996412.1"
                     /translation="AAFYLFLLHLPPQPSSLGIAILIVLTFVPFHVLHPIRVVRLRPI
                     TLSLLGAWAVLAIVTLASDFDVAPPVTIGLCVIAAWMVGSDAMFRLAKSFRA"
BASE COUNT          387 a          577 c          551 g          301 t
ORIGIN      
        1 gaaactgacg aacaatccgc gtggcttgat gcaggacagt gaccccggga acgtggtctt
       61 gccgacgccg tcatagacca cgtcgcaaag ttcgttgcgg ctgatctgct tgacgcgcgc
      121 cacgaagtct tcctcgttgt agaggatgac gtggtcgcag ccattggcga gcgcgagatc
      181 cgccttcgcc ttcgacccaa cggtgccgat gacatgcgcg ccgagcgccc tcgcccactg
      241 gcacgccagc aggcctatcc cgcccgcggc cgcatggatc agaacgcgat gatgcggctc
      301 gaccttgaag gtcttgtgca ggagatacca gaccgtcagc cccttcagca tcagcacggc
      361 gccctgctca taggtgatgt ggtcgggcag tttgacgagc ctctccgcgg ggatgttgcg
      421 ttcgctggcg tagccgccga ggttcgcata ataggcgacg cggtcgccgg gatgaaaatt
      481 ggtcacgccc ggcccgaccg acaacacctc gcccgccgct tcattgccga cgacgaatgg
      541 cagtcccggc gccttgtaga gaccggtgcg gaaatagacg tcgatgaagt tcaggccgac
      601 ggcgtgctgg cggatatgaa cctcgccctg cccgggcgcg ggcacgtcca cggcctcgta
      661 aaccagggct tcgggccccc ccaccttgtg cacccgcacc gccttggtca tttcaggttc
      721 tccctgggca attcatttgc aatcaaccga atgccatcga ggcagccttg tcaactcaat
      781 gaccgcgcga acgccggccc ggctggctaa cgtgctttct gcggttgcgc ttggccagca
      841 cgttgaaaaa ctcgaccgcc actgaaaacg cgatcgcgaa atagatgtag ccgcgcggga
      901 tgtgaaactt gaagccatcc gccaccagcg cgacgccgat cagcaccagg aacgccagcg
      961 ccagcatttt ggtggtcgga tgctccgcca caaaccgcgc gaccgggccg gacgagacat
     1021 acatgatgaa gcaggcgatg acgacggcgg cgatcatgat ctcgagatcc tgcgccatgc
     1081 cgatcgccgt aatgatggaa tccagcgaga acaccatgtc gataatcacg atctggatga
     1141 tgatccagaa aaatgcgctg ctccgcgggg ccgcgtcgtc gtcctcgtcg cgcgcttcaa
     1201 cctcgccgtg aatttcgtgg gtggctttgg cgatcaggaa cagtccgcca ccgatcagga
     1261 tgatgtcgcg ccaggaaaag cccatgcctt tcacggtgag cacgtcctgc gtcaatccga
     1321 tcagccacac cagcaggctg agcagcacaa tacgaaacac cagcgccagt gccaggccaa
     1381 tctgtcgcgc gcgctttgcc tgccgcgcgg ggatgcgcga aacgatgacc gacaggaaaa
     1441 tcacgttgtc gatgccgaga acgatctcca gcgccgtcag cgtcaacaat gcggcccagg
     1501 cttcggggct ggtccacaaa tcgatcatgc gcgaaacgat ttcgccagcc ggaacatggc
     1561 gtcgcttccg accatccagg cggcgatgac gcataatccg atggtcacgg ggggcgccac
     1621 gtcgaaatcg cttgccagcg tcacaatggc gagcaccgcc caggctccga gcagcgagag
     1681 cgtgatggga cggagccgca cgacgcggat cggatgcagc acatggaacg gaacgaacgt
     1741 cagcacgatc agaatggcga tcccaaggct cgatggctgc ggcggcagat gcagcaggaa
     1801 cagatagaac gccgcc
//
LOCUS       DATAVD010001834         1711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1661838, whole genome shotgun sequence.
ACCESSION   DATAVD010001834 DATAVD010000000
VERSION     DATAVD010001834.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1661838"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..620)
                     /locus_tag="VHX39_35020"
     CDS             complement(<1..620)
                     /locus_tag="VHX39_35020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996413.1"
                     /translation="MALSLLTGCGTNGDFGRVRPTLVSDDIHAWMGAATTRGPATDLT
                     WKHQLTDEERMLRDLAYPLIEPPYDRNKWYSVVGEVGAGSRPWPYPDRAAYASRLFTT
                     AYRSQTARYNRLMEDIRNDVVRLDPFFSSARYVIEMDRKREKALNYVHGLTQEEQDNT
                     IQRMAENRNIVLWVKASLHERCESYRLALERMVIAAPSPLAVEAERA"
     gene            complement(674..877)
                     /locus_tag="VHX39_35025"
     CDS             complement(674..877)
                     /locus_tag="VHX39_35025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996414.1"
                     /translation="MGIIVQFPDGHRPLGGGRYVDANAEPASVIILPVVRIERNPDLP
                     SDGLDGGSSAAPGRRRRRRSSRS"
     gene            1031..>1711
                     /locus_tag="VHX39_35030"
     CDS             1031..>1711
                     /locus_tag="VHX39_35030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996415.1"
                     /translation="MTDASGSSNLNGLAELGSRQNVDVRPTLLRVMTDLYIQKPSHTE
                     QEEKHFTELALRLIELVDAKTRAVIAEKIAGYSPAPAKVRQRLLRELITLKEPETEVR
                     SNAEATPANELSELFFAADAEERRLILVNLPYAQLPPAAAIAPATAGEANNRLEAAAM
                     GHNTELFAREIERVFAISRAQARRIYEDQLGEPIVVAAVAIGMQSTVLQRILLCLHPA
                     ISQSVQRVY"
BASE COUNT          317 a          559 c          530 g          305 t
ORIGIN      
        1 gcgcgttcgg cctcgaccgc cagcggcgaa ggcgccgcga tcaccatgcg ctcgagtgcc
       61 agcctgtagg attcgcagcg ctcgtgaaga gacgccttga cccacaacac gatgttgcgg
      121 ttttcagcca tgcgttgaat cgtattgtcc tgctcttcct gagtcagacc gtgcacgtag
      181 ttgagggcct tctcccgctt gcggtccatc tcgatgacat agcgcgccga gctgaagaac
      241 ggatcgagcc ggacaacatc gtttcgaatg tcctccatca accgattgta gcgggcggtc
      301 tgcgaacgat aggcggtggt gaacagccgt gacgcatacg cggcacggtc gggatagggc
      361 cacggccggc tgccggctcc gacctcgccg accacgctgt accatttgtt gcgatcgtaa
      421 ggcggctcga tcagcggata agcgaggtcg cgcagcatgc gctcctcgtc ggtaagctga
      481 tgtttccagg tcagatcggt ggcggggccg cgggttgttg ccgcgcccat ccaggcgtgg
      541 atgtcgtcac tgaccaaggt aggccggacc cgtccgaaat caccgttggt cccgcagccc
      601 gtcagcaggc tgagcgccac ggccgccgtg agccatcgca acgggcccgt cattgcatcg
      661 accggcgctg cactcacgaa cgcgacgaac ggcgccggcg gcgccggcca ggggccgcgc
      721 tgctgccgcc atccagtcca tccgacggca gatcgggatt gcgctcgatc cgcaccaccg
      781 gaaggatgat cacgcttgcg ggctccgcat tggcatcgac gtagcggccg ccaccgagcg
      841 gccgatggcc gtctggaaat tgcacgatga ttcccatgcc cctctccgcg gacaccgggg
      901 cttcgccttc tgctgcagcc accgatcggt ccgtgccctc aattaaggac cggcatggtt
      961 aacggttcgc taacggaggc ggcgctaacc tcccgctatt gcgcaattcg cgctgtgatc
     1021 tcgtgcaacc atgaccgatg catccggctc ctccaacctg aacggccttg ccgaactcgg
     1081 cagccgccag aacgtcgatg tccgaccgac gctgctgcgg gtgatgaccg acctctatat
     1141 ccagaaaccc agccacaccg agcaggaaga gaagcatttc accgaactcg cattgcggct
     1201 gatcgaactg gtggatgcca agacccgtgc ggtgatcgcc gaaaagattg ccggttattc
     1261 ccccgcaccg gccaaggtcc gtcagcgtct attgagggaa ctcatcacgc tcaaagagcc
     1321 cgagacggaa gtccgttcga acgccgaagc gacgccggcc aacgagctga gcgagctgtt
     1381 ctttgccgcg gacgccgaag agcggcggct gatcctcgtc aatcttcctt atgcgcaact
     1441 gccgccggcc gccgcgattg cgcctgccac cgcaggcgag gcgaacaacc gtctcgaagc
     1501 tgctgcaatg gggcacaaca ctgagctgtt cgcccgcgaa atcgagcggg tgttcgctat
     1561 ttcacgggcg caggcgcggc gcatctacga ggatcagctt ggcgagccca tcgtggtggc
     1621 ggcagtcgcg attggcatgc agtccacggt gctgcaacga atcctgctgt gtctgcatcc
     1681 ggcgatcagc cagtcggtgc agcgggttta c
//
LOCUS       DATAVD010001835         2600 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3147674, whole genome shotgun sequence.
ACCESSION   DATAVD010001835 DATAVD010000000
VERSION     DATAVD010001835.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2600
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3147674"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..523)
                     /locus_tag="VHX39_35035"
     CDS             complement(<1..523)
                     /locus_tag="VHX39_35035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEX3996416.1"
                     /translation="MVDLIVRNARLASAPEAPPVDIAIADGKIVAVRPDLQVEALSYD
                     AEGRLTCAGLVETHIHLEKSRIVDRCTLETGRQPMAMERVSAVKHTFTVEDAYQRAAQ
                     TLEGCIKFGATRMRPHVELDGGVELRTFEAVTALKHDYSWAIDLEICVFPQEGLTDNP
                     RADELLVAALQRGA"
     gene            complement(581..1903)
                     /gene="fahA"
                     /locus_tag="VHX39_35040"
     CDS             complement(581..1903)
                     /gene="fahA"
                     /locus_tag="VHX39_35040"
                     /EC_number="3.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004334 - fumarylacetoacetase activity
                     [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetase"
                     /protein_id="HEX3996417.1"
                     /translation="MIDETHDPGRTSWVESANGHPAFPIQNLPHGVFSPDGGTPRGGI
                     AIGTKIFDVSAALEIGLFSGLALEAAQAASGRSLNAWLEATPDARRALRRRVGELLDS
                     RASDAASLRGIADRLLHDEARCTMHLPARIGDFTDFFAGIHHAYTAGTISRPDNPLMP
                     NYKYVPVAYHSRASSVRPSGGTVRRPNGQRKPPEQAAPDFGPCRNLDYELELGVWIGP
                     GNDLGSPIPIAEASNHVAGLCLLNDWSARDIQSWESQPLGPFLAKSLATFVSPWIVTT
                     DALAPFRIAQPPRPAGDPAPLPHLNDAADQARGCFNITFEVSLLTPKMRAAGAAPRLL
                     SRSSASDLYWSVAQMVAHHSSNGCNLQPGDLFGSGTGSGTGAGSAGCLLEMTRGGRDR
                     VSLPNGETRAYLEDGDEISFHGQAHRTGHVSIGFGECRGTVTEALSLT"
BASE COUNT          475 a          795 c          824 g          506 t
ORIGIN      
        1 gggcgccgcg ttgcaaggcc gcaaccagta gctcgtcagc gcgtggattg tcggtcaggc
       61 cctcctgcgg aaatacgcag atctcaaggt cgatcgccca ggaataatca tgtttcagag
      121 ctgtaactgc ttcaaatgtg cgcaactcca cgccgccgtc gagttcaacg tgcgggcgca
      181 tccgtgtggc accgaatttg atgcagccct caagcgtctg cgcggcgcgt tgataggcat
      241 cttcgacggt gaaggtatgc ttgacggccg atacgcgctc catcgccatc ggttgtcggc
      301 ccgtctcgag agtgcaacgg tcgacgatac gcgatttctc cagatggata tgggtttcca
      361 ccaggccagc gcaggtcagc cgtccctcgg cgtcgtagga cagcgcttcg acctggaggt
      421 cgggccggac ggcgacaatt ttgccgtccg caattgcgat gtcgacaggc ggtgcttcgg
      481 gtgcgctggc gaggcgcgca ttacgaacga tcagatccac catcacccgg cctccggctt
      541 gccgcgccat gatgtacgca aagcggccgc gctgtcaccg tcaggtcaga gacaatgcct
      601 cggttaccgt tccgcggcat tcgccaaacc cgatcgagac atggccggta cggtgcgcct
      661 ggccatggaa tgaaatctcg tcaccgtctt ccaggtaagc acgagtttcg ccattcggca
      721 gcgacacgcg atctcggccg ccacgggtca tctccaacag gcaacccgcc gagcctgcgc
      781 cagtccccga ccccgtgccg ctgccgaaca gatcgccggg ctgtaggttg cacccattgg
      841 agctgtggtg agccaccatc tgcgcgacgc tccagtagag gtcgctggcg ctggagcgcg
      901 acagtaggcg cggcgcagcc ccggccgcac gcattttcgg ggtcagtaac gatacctcga
      961 aagtgatatt gaagcagcct cttgcctggt cggcagcgtc gttcaaatgc ggcaacggcg
     1021 ctggatcacc agccggcctt ggtggttggg cgatgcggaa tggcgccaga gcgtccgtcg
     1081 tgacgatcca cggcgatacg aacgtcgcca gacttttcgc caggaacggc cccagaggtt
     1141 gcgattccca gctttggatg tcgcgcgcgg accagtcgtt cagcagacaa agtcccgcaa
     1201 cgtggttgga cgcctcggcg atcgggatcg gcgagcccag gtcgttgccg ggaccgatcc
     1261 acacgccgag ttcaagttcg tagtcgaggt tccggcacgg gccaaagtcg ggcgccgcct
     1321 gctccggcgg tttacgctgc ccgttgggcc ggcgcaccgt gccgccggaa ggccggaccg
     1381 atgaggcgcg gctgtgatag gcaaccggta catatttata attgggcatc agcggattat
     1441 ccggtcggct gatcgtgcct gcggtgtagg cgtgatggat gccggcgaaa aaatccgtga
     1501 agtcgccgat ccgcgcaggc aaatgcatcg tgcagcgcgc ctcatcgtgc agcagtcggt
     1561 cggcgatgcc gcgcagcgac gcggcatcgg atgcgcgact gtccagcaat tccccgacac
     1621 ggcgccgtaa tgcccgacgc gcatccgggg tggcttccag ccacgcgttg agtgaacgcc
     1681 cgcttgccgc ctgtgcagcc tccagtgcga ggccggagaa cagcccaatc tccagcgcag
     1741 cgctgacgtc gaaaatcttg gtcccaatag cgatgccgcc gcgaggcgta cctccatccg
     1801 ggctgaaaac gccgtgcggc aggttttgaa tgggaaaggc tggatgaccg ttggcagact
     1861 ccacccaact ggtgcggccg ggatcgtggg tctcgtcgat catttatgtc ctccctggca
     1921 tttatgtcct ccctggcagg tttggccgat cgcactccag gtgcaatccc tgggctgata
     1981 gcgcgggcga cgccggcggt aaaacccgca cggtcgcggt ccccaggacg gaggtaggtt
     2041 cgacggccgc agtggggttg cataggcgta acccggtgtt tcgggtccat tgcgtgagtg
     2101 gattgcgtaa cggctgttgc actctgtaac ccggcgccgt gcgcctaagc ccaggttact
     2161 ggtcgcagct ttgaggtttg ggcgaccgtg cgtcatcgct acgacagatc gcaagggcga
     2221 tgtcgttgtt agcgtgatac cggcgcgtcg tgtggccaat attaccagtt gtgtcggatt
     2281 ttgacgagat cgtcacgatt ccatcccaaa attttgccgg tcattgtgcg gctgtcatcg
     2341 gcttcccgga gcggcggcgg tcacacactc aaacgacaga aaccccagac cttgattgtc
     2401 cggaaccata ccgcctgtgc atacgttggt atgtgtgatc cccaatcccg tggcacgccc
     2461 aaagccaacg tcggcttccg gccatgtggc gttgatgcgg aatgagtcga tggtctccgt
     2521 cggtcggttg accgggtcag ctcgcaaatc tggcaacttg ttgctacaaa cgaatgaccg
     2581 ggcggaattt tccaccatcg
//
LOCUS       DATAVD010001836         1703 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_545637, whole genome shotgun sequence.
ACCESSION   DATAVD010001836 DATAVD010000000
VERSION     DATAVD010001836.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_545637"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..457
                     /locus_tag="VHX39_35045"
     CDS             <1..457
                     /locus_tag="VHX39_35045"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3996418.1"
                     /translation="DAIDLARAFPGTTIILNHVGGVLGVGPYNGHREEVLSGWRKDIT
                     ELAKCPNVYCKLGGLGMVSVGFDFHEREVPSGSEDLAAAWRPYIEHCIEAFGVDRCMF
                     ESNFPPDKQSCGYTELWNAFKRITAHATAQEKTALYSGTAARVYRLTVP"
     gene            556..1389
                     /locus_tag="VHX39_35050"
     CDS             556..1389
                     /locus_tag="VHX39_35050"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3996419.1"
                     /translation="MDISGKTAIVTGAASGIGLGIATALAQAGANVVMADIQKDAVEQ
                     AAHGLSGTNKRVMPVRIDVTQEQSVLDALAEAERNFGKLHIACNNAGVPMHGMPLVDV
                     APSDWEFVIGVNIWGVIHGIRHFVPAILKHGEEGHVVNTASVAGVQNRRGTNQGPYSM
                     SKYAVLSLSEALEHELEGTNVGVSVLCPGPIATNIARGARNRPDHMGGPLVRDRDEAT
                     LAARLATTGLDPMKVGERVVDAIRTKTFYAFVSAVPADVIRARHRRIEEALNSPWVTP
                     Y"
BASE COUNT          321 a          518 c          562 g          302 t
ORIGIN      
        1 ggatgcgatc gatctcgcgc gagcgtttcc gggcaccacg atcatcctca atcatgttgg
       61 cggcgtcctc ggcgttgggc catataacgg ccaccgggag gaagtcctct ccggttggcg
      121 caaggacatc accgagttgg ccaaatgccc caacgtgtat tgcaagctgg gcggtctcgg
      181 catggtgtcg gtcggcttcg acttccacga gcgcgaggtg ccatcggggt cggaagacct
      241 tgcggccgca tggcgaccct acatcgaaca ttgcatcgaa gccttcgggg tcgatcgctg
      301 catgttcgag agcaacttcc caccggacaa gcagtcctgc ggctataccg aactatggaa
      361 cgcgttcaag cgtatcaccg cccatgcgac cgcgcaggaa aagacggcgc tgtacagcgg
      421 caccgcggcg cgtgtgtatc ggctgacggt gccgtaagca cggcttctac ttgcatgccg
      481 gaacaggcgc catgcgcggc gcctgttccg gcatcgcgcg tgctgcgttg aacgaacctt
      541 ccgaaaggct tcaagatgga catctccggt aaaaccgcca tcgtgaccgg cgccgcttcc
      601 ggcattggcc tcggcatcgc gaccgcactc gcgcaagccg gcgccaacgt cgtcatggcc
      661 gacatccaga aggacgcggt cgagcaggcg gcgcacggcc tctccggcac caacaagcgg
      721 gtcatgccgg tgcggatcga cgtgacgcag gagcaatcgg tgctcgacgc gctggccgag
      781 gccgagcgca atttcggcaa gctgcacatc gcctgcaaca atgccggcgt gccgatgcac
      841 ggcatgccgt tggtcgatgt cgcgccaagc gattgggaat tcgtcatcgg cgtcaacatc
      901 tggggcgtca tccacggcat ccggcatttc gtgccggcga tcctcaagca cggcgaggaa
      961 gggcatgtcg tcaacaccgc ctcggtcgcc ggcgtccaga accgccgcgg caccaaccag
     1021 gggccgtatt cgatgagcaa atacgccgtg ctgtcgctgt ccgaggcgct ggagcacgag
     1081 ttggaaggca ccaatgtcgg tgtgtcagtg ctgtgtccgg gcccgattgc gacgaatatc
     1141 gctcggggtg cccgcaaccg gccggaccat atgggcgggc ctttggtacg ggatcgcgac
     1201 gaagcgacgc tggccgcgcg gttggcgaca accgggcttg atccgatgaa ggtcggcgag
     1261 cgggtggtgg atgcgatccg gaccaagacg ttttatgcgt ttgtcagtgc ggtgccggcg
     1321 gacgtcattc gcgcacggca tcggcggatc gaggaggcgc tgaacagccc gtgggtgacg
     1381 ccttattgag tgctcgggga ccagaattga cgccccctct cggtgcagtt gacgtggatc
     1441 gcacggacct tgccaaattg acggctaggg gtgatggaac ggggggaggt agttgatgcg
     1501 actcgtgcta ttgtcactcc ccaacccagg cgaaaggatc ccccgccatg tccaccggcg
     1561 caaagtctgg tttgcagatg cgagcagagg catccgcggc aaaatttcac acggcggctc
     1621 gttctgccat agtcatcgag ttcgcgggcg tcccgaaggc cgggaagacc actacgctca
     1681 atgcggtgag gcattcctta gac
//
LOCUS       DATAVD010001837         2713 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3333315, whole genome shotgun sequence.
ACCESSION   DATAVD010001837 DATAVD010000000
VERSION     DATAVD010001837.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2713
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3333315"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            217..522
                     /locus_tag="VHX39_35055"
     CDS             217..522
                     /locus_tag="VHX39_35055"
                     /inference="COORDINATES: protein motif:HMM:NF024886.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEX3996420.1"
                     /translation="MSPLRTRMIEDMTLAGLAEGTQKVYIQAVRRLAAHYRRSPDELG
                     EEEVRGYLLELRQRGVARGTFKTGQYGLRFLYRHTLGRAWGLFGEKKDRLATAEAAA"
     gene            527..1060
                     /locus_tag="VHX39_35060"
     CDS             527..1060
                     /locus_tag="VHX39_35060"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEX3996421.1"
                     /translation="MSEDQVRHLLSSIRNPVHKTCLAVMYACGLRISEATTLEVSAID
                     RANQVLRIVGKGNKERLVPLPQPVLDDLSSLWRTDRNRRWLFPNRHGDAPLNKRVLSD
                     TFTSAAVAAGIQRRVTPHSLRHSYATRLIENGIDTRIVQILLGHASITSTAIYTHLTT
                     PTRASLHSLLDRLMTGL"
     gene            1070..2218
                     /locus_tag="VHX39_35065"
     CDS             1070..2218
                     /locus_tag="VHX39_35065"
                     /inference="COORDINATES: protein motif:HMM:NF016847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX3996422.1"
                     /translation="MIEVADVFRRFAADYVSAHGASMLPSHRRAIDDILDCRTAALPH
                     CRTAALGGQVWRCETCNKEVYSFHSCGNRSCPKCHTAQTQEWLEHRQAEMLPVPYFHI
                     TVTVPAQLREVLRANQRDGYAMLMQASAAAIIELARDPRYVGGTVAVLTVLHTWTQQL
                     NLHPHVHCLVSGGGISEDGTTWYPARRKFLVPIKALVKLVRGKFRALLQRKYPDLLIP
                     DPVWRMPWVLHVTAWGNGEQAVLEYLARYVFRIALTNARIVGLDDETVTIQYKERKTG
                     RRRTSRLNGEEFMRRFLQHVLPRGFHKVRYFGLWHPAQRHNAARVRHTLQLEAPPNFD
                     PSQNPIVPPLVPPDAKPVPPIEPMICPHCHQGYLIFIRRLSPRQAMGP"
BASE COUNT          506 a          943 c          783 g          481 t
ORIGIN      
        1 caacttggcc catattgggt gtacccgggg gtcgcgggca ggaaaacgag gggtttcctg
       61 cccccgcgtc gacggttggc ggtagggcct gttttcctgt tggacggaac ggctgcgccg
      121 aaggctcggg tggggaggtt ggtggctagt tggacgtatc ctttcgatcg gcgggcatga
      181 gtttgcccgc tggaatttcg atgaaaggag accaccatgt cgccactacg tacgcggatg
      241 atcgaggaca tgaccctggc cggattggct gagggaacgc agaaggtcta catccaggcg
      301 gtgcgcaggt tggctgcgca ctaccgccgc tcacccgatg agctcggcga ggaagaggtg
      361 cggggctacc tgctcgagct gcggcagcga ggagtggcac gcggcacctt caaaaccggt
      421 cagtacggcc tgcgtttcct ctaccgccat acgctcggcc gggcctgggg actgttcggg
      481 gaaaaaaagg atcgcctcgc cacggcagaa gcggctgcct gacgcgctgt cggaagatca
      541 ggtccgtcat ctcctcagca gtatccgcaa cccggtccac aagacgtgcc ttgccgtcat
      601 gtatgcgtgc ggtctgcgca tcagcgaggc caccacgctg gaggtcagcg ccattgaccg
      661 ggccaaccag gtgctgcgca tcgtcggcaa gggcaacaag gagcggctgg tgccgctgcc
      721 acagccggtt ctcgacgacc tcagtagcct gtggcgcacc gatcgcaacc gccgctggct
      781 attccccaac cgacacgggg atgcgccgct caacaagcgc gtgctgtccg ataccttcac
      841 ctccgccgcc gttgcggcag gcatccagcg gagggtgacg ccacactccc tgcgccattc
      901 ctatgcgaca cggctgatcg agaacggcat cgacacccgc atcgtgcaga tcctgctcgg
      961 ccacgccagc atcacctcca ccgccatcta cacccacctg accacgccca cccgggcgtc
     1021 gctgcacagt ctgctcgatc ggctgatgac cggactctga gacgcggtca tgatcgaggt
     1081 cgccgacgtg ttccgccgct tcgcggcgga ctacgtctcg gctcacggcg cgtcgatgct
     1141 accctcgcat cggcgtgcca tcgacgacat cctggactgc cgcactgccg cactgccgca
     1201 ctgccgcacc gccgcactcg gcggccaggt ctggcgctgc gaaacctgca acaaggaggt
     1261 gtactctttc cattcctgcg gcaatcgcag ttgtcccaag tgccacaccg cgcagacaca
     1321 ggagtggctc gaacaccggc aggcggaaat gctgccggtg ccgtacttcc acatcaccgt
     1381 caccgtgccg gcgcagctac gtgaggtgct gcgggccaat cagcgcgacg gttacgctat
     1441 gctgatgcag gcgagcgccg ccgcgatcat cgaactcgcc cgcgatccgc gttacgtcgg
     1501 cggcaccgtc gcggtgctca ccgtgctgca tacctggacc cagcaactga acttgcaccc
     1561 gcatgttcat tgcctggtca gcggcggcgg aatctccgag gacggcacga cgtggtatcc
     1621 ggcacgccgg aagttcctcg tacctatcaa ggctctcgtc aagctggtgc gcggcaagtt
     1681 cagggcatta ctacagcgaa agtatcccga tctcctcatc cccgacccgg tgtggcgcat
     1741 gccttgggtc cttcatgtca ccgcctgggg caacggcgaa caggccgtgc tcgaatacct
     1801 cgcccgctac gtctttcgca tcgctctcac caacgcccgg atcgtcggcc tcgacgacga
     1861 aacggtcacc atccaataca aggaacgcaa gaccggccgc cggcgaacct cccgcctcaa
     1921 cggagaggaa ttcatgcgcc gcttcctcca gcatgtgctg ccacgaggct tccacaaggt
     1981 ccgctatttc ggcctgtggc atcccgcgca gcgccacaac gccgctcggg tgcggcacac
     2041 gctgcaactc gaggcgccac ccaacttcga cccctcgcag aaccccatcg ttccgccact
     2101 tgtgcccccc gacgcaaagc cagtgccgcc gatcgagccg atgatctgtc cgcactgtca
     2161 ccagggctac ttgatcttca tccgcagact ctcgccgcgg caggcgatgg gaccatgatc
     2221 agcaccgcgc cccccaacca ccgctcagtc ttgttgccgc gtgctccgcc acgccacgga
     2281 gatcggctgt caccgccgca accaatatcg cgaaccctgc cctagatgac gccgtcgacc
     2341 gtgcagaaag tgacgcttcc gaccgcgata cggggatcct gctcctcagg tcgctcctcc
     2401 tgaccggcga ccatcactcc ggacaaagac cgtcctaggt gaaatctcca tagccccagc
     2461 cgctccccga cgccccgcgt tcgtccaacg gggcttctgc ggcggcttcg cgccgcacaa
     2521 acccttaatt cgttctgcga agtccggtgc tcataaggaa tttcagcgat ttaggcctcg
     2581 caaaactcat gtgcgaaacc tcctcttttg cgatgatttt tgcgaagggt tcgcgcgaca
     2641 taagattacg ccacagtcca caagggcaaa acttaattgc acatcgtggc caccgttcag
     2701 cagcaattcg cct
//
LOCUS       DATAVD010001838         3613 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2406643, whole genome shotgun sequence.
ACCESSION   DATAVD010001838 DATAVD010000000
VERSION     DATAVD010001838.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3613
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2406643"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1004)
                     /locus_tag="VHX39_35070"
     CDS             complement(<1..1004)
                     /locus_tag="VHX39_35070"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3996423.1"
                     /translation="MIKRFHVLYVGQIDLDNVGLHGTPANERRYSNDRFAEVFWTARR
                     MARVMDETGYHALWTAEHHFQHEGYECLPNLIQLGLWLATQTEKLKFGCGFNVLPMWH
                     PLRLAEDYAMADIVTGGRVIMGVGRGYHTREVETLGGPLLDSVKNREIFEEGVQLMLK
                     AFNEESFSFHGKHFTCPPEVDYRGYKMKEITLVPRPIHTPVPIYMPIASGTTIDMMAK
                     YGLKAMVVLNGEKILDDVIRAYHEACARYGQHKQLGQDLVWGAGLYLAKDQEEAIRKV
                     EPAHDERYKWFAPFGFVRYADEHGRTWGTPGAPAKIPSLRDGVQQKAWFCGSPQQVID
                     G"
     gene            complement(1070..1855)
                     /locus_tag="VHX39_35075"
     CDS             complement(1070..1855)
                     /locus_tag="VHX39_35075"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEX3996424.1"
                     /translation="MHINTMRAGLERGEPQIGTWLTMVRNPAILSLMKSAGLDFARVD
                     MEHTALTIEHIADLAVLARALDFPIAVRPPHANREWITRLLDNGVWNLHCPQVENAEH
                     AREIVDASRYAPMGLRGNGGLSAATDFNHTVPLLERRAHANRQVFVTVMFETARAFED
                     LDEIAAMPGIDALTIGPADLAQDLGVAGTPDQRRVLDEKRDQILAAARRHGKVAAMLV
                     GSFEEMQHWRAAGVTLLAYSSDADILFSGYNSAMQRIKGKEAT"
     gene            complement(1860..2639)
                     /locus_tag="VHX39_35080"
     CDS             complement(1860..2639)
                     /locus_tag="VHX39_35080"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014457234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEX3996425.1"
                     /translation="MGQLDGKAGIVTGAASGIGAATARVLAREGAKLVLTDLDDASGL
                     ALADEIGGVYVHHDVTDEDGWRDVVATAEKQFGRLDILVANAGIGIMGPVVDMSLTDW
                     RRQMAINVDGVFLSVKYCIPAMRRGGRGGSIVMLSSVAGLRGSAGLAGYSASKGAVRL
                     FAKSMALECAQAGDGIRVNSVHPGIIATPIWTKLPAGANVPLDPEKIGAATVPLGKAG
                     QAEEIANGILFLASDQSSHMTGSELVIDGGMTAGRILRLGG"
     gene            complement(2974..3396)
                     /locus_tag="VHX39_35085"
     CDS             complement(2974..3396)
                     /locus_tag="VHX39_35085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX3996426.1"
                     /translation="MTNRRMDEIIRHQHPVTMPTTASIREACAEMHKHRIGAVLVTDA
                     KGSLAGIFTGRDLVRIVAAGKDVGKATLRLAMTAQPHTMPPGHHAIDALRVMRDGGFR
                     HIPVVDDGKIIGIVSRGDFRGLEHDRLDVETGYWETIR"
BASE COUNT          667 a         1207 c         1043 g          696 t
ORIGIN      
        1 ccatcgatca cctgttgcgg ggagccgcag aaccacgcct tttgctgcac tccatcccgc
       61 aacgacggaa ttttggccgg agcgccgggt gtcccccagg tgcgcccatg ttcgtcggcg
      121 tagcgcacaa aaccgaacgg agcgaaccac ttatagcgct cgtcatgagc cggctcgacc
      181 ttgcggatcg cttcttcctg gtcttttgcc agatacagac cggcgcccca gaccagatcc
      241 tgaccgagct gcttgtgctg gccataacgc gcgcaggcct cgtgataggc gcggatcacg
      301 tcatcaagga tcttttcgcc gttcaacacg accatggcct tcaggccata tttcgccatc
      361 atatcgatgg tcgtgccgct ggcgatcggc atatagatcg gcaccggcgt gtgaatcggc
      421 cgcggcacca gggtgatctc cttcattttg tagccgcgat aatcgacctc cggcgggcag
      481 gtgaagtgct tgccgtggaa gctgaaggat tcctcgttga aggccttcag catgagctgc
      541 acgccttctt cgaatatttc ccgatttttg acggaatcca gcagcgggcc gcccaatgtc
      601 tcgacttcgc gcgtgtggta accgcggccc acgcccatga tcacccggcc gccggtgacg
      661 atatcggcca tggcgtaatc ctcggcgagg cgtagcggat gccacatcgg cagcacgttg
      721 aagccacagc cgaacttcag tttttcggtc tgcgtggcga gccacaagcc aagctggatc
      781 aggtttggca ggcactcata gccttcgtgc tgaaaatgat gctcggcggt ccacagcgcg
      841 tggtagccgg tttcgtccat cacccgggcc attcgccgcg cggtccagaa gacttcggcg
      901 aaacggtcgt tggaatagcg gcgctcgttg gcgggcgtgc catggagccc gacgttgtcg
      961 aggtcgatct ggccgacata cagcacgtga aagcgtttga tcatggtgga ttcctctttg
     1021 cccggttatg gcacgtaccg ggttttcctt tgcaacggac gcagcgaggt tacgtggctt
     1081 ccttgccctt gatccgctgc atcgctgaat tgtaaccgct gaacaatata tcggcgtcgc
     1141 tggagtacgc cagcagcgtc actccggctg ccctccagtg ctgcatttcc tcgaaactgc
     1201 cgaccagcat tgcggcaacc ttgccgtgcc tgcgagccgc cgccaggatt tggtcgcgct
     1261 tttcgtccaa cacacgccgc tggtccggtg tccccgccac gcccagatcc tgcgccagat
     1321 ctgccggacc gatggtcagc gcgtcgatcc ccggcatcgc cgcaatctcg tccagatcct
     1381 caaacgcccg cgcagtttcg aacatcactg tcacgaacac ctggcgattg gcatgggcgc
     1441 gccgttccag caacggaacg gtgtgattga agtcggtcgc cgcactcagc ccaccgttgc
     1501 cacgcagacc catcggcgcg taacgcgagg catcgacgat ctctcgcgcg tgttccgcgt
     1561 tctcgacctg cgggcagtgc aggttccaca cgccgttgtc caacagtctt gtgatccact
     1621 cgcgattggc gtgcggcggg cgcaccgcga taggaaaatc caatgcccgc gccagcactg
     1681 ccagatcggc gatgtgctcg atggtcaacg cggtgtgttc catgtctacg cgagcgaaat
     1741 ccagtccggc ggatttcatc agcgacagga ttgccggatt gcgcaccatg gtgagccagg
     1801 tgccaatttg cggttcgccc cgttccaggc ccgctcgcat ggtgttgatg tgcattgtgc
     1861 taacctccca gacgcaggat ccggccggcg gtcatgccgc cgtcgatcac cagttccgac
     1921 ccggtcatgt gactcgactg atccgaagcc aggaacagga tgccgttggc gatttcctcg
     1981 gcctggccgg ctttgccaag cggcaccgtc gccgccccga tcttttccgg atcgagcggt
     2041 acgttcgccc cggccggcaa tttcgtccag atcggtgtcg caatgatccc cggatgtacc
     2101 gagttaaccc gtatcccatc ccccgcctgg gcgcattcca gcgccatcga cttggcgaac
     2161 agccgcacgg cacccttcga cgcgctatat cccgccagcc cagcggatcc gcgcaaaccg
     2221 gcgaccgagg acagcatgac gatggagccg cctcggccgc cgcgccgcat cgccggaata
     2281 caatacttga cagaaaggaa tacgccgtcg acgttgatcg ccatctgccg ccgccagtcg
     2341 gtcagcgaca tgtccacgac cggccccata atgccgatcc ccgcgttggc aaccaaaata
     2401 tccaaccggc cgaactgctt ttccgctgtc gccacgacat cgcgccagcc gtcctcatca
     2461 gtgacgtcat gatggacgta aacgccgcca atttcatcgg ccaacgccag tcccgaggca
     2521 tcgtcgagat cggtcagcac gagtttggca ccttcgcgcg ccaggacacg cgcggttgcc
     2581 gcgccgattc ccgatgcggc accggtgacg atgcccgctt tgccatccaa ttgccccatg
     2641 ccgtcctccc tggcttcggg catttcaaca gaccggccag ggcgcagcaa gccgcgacgg
     2701 gaacccgttc tgcgcgcatt gctgaaatcg aagctccggg cgtccacgcc gtacatcaca
     2761 acgccgatct gcgcgatccc actcaaatcg acgctacgac gcaaagccac ggcgcgcccg
     2821 acctcctggt caaccgccgc cgttcgttac tttggcgctg tggaggatgc cagcgtcact
     2881 ggaccgatcg cgtttctgtg tggccggcaa agcggcggcc gcaacggcgc cgcgctaccg
     2941 atcgatggcg gctggccggc gggacaccga aatctaccga atcgtctccc agtagccggt
     3001 ttcgacatcc aaacggtcgt gctcgagccc gcgaaaatcg ccgcgcgaga cgataccgat
     3061 gatcttgcca tcatcgacca ccgggatatg cctgaagccg ccatctcgca tgacccgcaa
     3121 ggcatcgatc gcatggtggc cgggcggcat cgtgtgcggc tgcgcggtca tcgccaggcg
     3181 caaggtcgct tttccaacgt ccttcccggc agcgacaatg cgcaccagat cgcggccggt
     3241 aaaaatcccg gcgaggcttc ctttcgcatc ggtgaccagc acggcaccga tccggtgctt
     3301 atgcatctcc gcgcacgcct cacgtatcga ggcggtggtt ggcatggtga cgggatgctg
     3361 atggcggatg atctcatcca ttcggcgatt ggtcatgggg cgtgcctcct tcctgaacac
     3421 cacgatgaca atgcgatgac tgaagcgcat tgatcgggat caatcaacgg cccaacggac
     3481 cccaggttgc gcgtcctgcc ccttctgggc gacactcgac gcgatcagcg aggagcgtcg
     3541 ccatgtacga acaacacgtc agcgtcacca caaagcacgg cgtcatgccg acgttcgttg
     3601 cctgcccgga tgg
//
LOCUS       DATAVD010001839         3002 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2779761, whole genome shotgun sequence.
ACCESSION   DATAVD010001839 DATAVD010000000
VERSION     DATAVD010001839.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3002
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2779761"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..1249)
                     /gene="coaBC"
                     /locus_tag="VHX39_35090"
     CDS             complement(50..1249)
                     /gene="coaBC"
                     /locus_tag="VHX39_35090"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010514580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEX3996427.1"
                     /translation="MSGLSGKHVLLIISGGIAAFKAAELIRLLRRADCGVTCVLTANG
                     AQFVTPLTLQALSEAKVYTDLFSLTDENEMGHIQLSRAADLLVVAPATANMLAKMAAG
                     MADDLASTVLLATDKPVLVAPAMNVRMWLHSATQANMATLKGRGIGCIGPNEGAMACN
                     EFGFGRMAEPSEILAAIEAALSGKQLLSGRHVIVTSGPTHEPIDPVRYLANRSSGRQG
                     HSIAAALASLGARVTLVSGPVSIPDPAGVAVRRVESAADMLAACKAALPADAAVFAAA
                     VADWRVANTSEGKIKKGATTPTFELVPNPDILATIAAAGPARPRLVIGFAAETDDLMA
                     NAQGKLRRKNADWIVANDVSTATGIMGGEENEIHLITAAGVEDWPRLDKQEVARRLAA
                     RIAEALR"
     gene            complement(1246..1992)
                     /locus_tag="VHX39_35095"
     CDS             complement(1246..1992)
                     /locus_tag="VHX39_35095"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006558714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3996428.1"
                     /translation="MSDHSEPVDFGYRKVGRVEKAAMVRAVFDSVAPRYDLMNDLMSF
                     GVHRVWKHVFVTALDPRPRDMLLDLAGGTGDISFGWLRRGGGPAILSDINPSMLRIGV
                     DRAIERGLIGGLLPLVTDAEHLPLPDRCVDRVSIAFGLRNCTDKPQVLREARRVLKPG
                     GRFLCLEFSKLQVAALQPLYDAWSFKVLPRLGQMAAGDSDSYVYLAESIRTFPDQASL
                     ATMLTEAGLSRVTVRELSGGIAAIHAGWRL"
     gene            complement(2049..2255)
                     /locus_tag="VHX39_35100"
     CDS             complement(2049..2255)
                     /locus_tag="VHX39_35100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996429.1"
                     /translation="MFDAIIAKCAASYSAASQSTSVVIPVDRPDLMADAGYEGLRYQG
                     PAARRRDGKDWLAAYWMPFHAVAG"
     gene            2444..>3002
                     /gene="mutM"
                     /locus_tag="VHX39_35105"
     CDS             2444..>3002
                     /gene="mutM"
                     /locus_tag="VHX39_35105"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HEX3996430.1"
                     /translation="MPELPEVETVMRGLQARLEGHRIVRAFINRPDLRWPFPSGLVER
                     LTGAVVLGFRRRAKYILMRISGGDSVLIHLGMSGRIVLTPGTPNTDTAHEHLVLEMDN
                     GWRVGFVDPRRFGSVDLVPTAQEDTHRLLAGMGPEPLDDAFSAAMLNDALAGKRTPIK
                     AALLDQRIVAGLGNIYVCEALFRSRI"
BASE COUNT          592 a          987 c          872 g          551 t
ORIGIN      
        1 agcgacaaat cctggttgtg cggcaggcgg cgcactcgtg ctggaacggt catcgcaaag
       61 cctccgcgat gcgtgcggcc agtcgtcgcg ccacttcctg tttgtccagc cgcggccaat
      121 cctcgacgcc ggcagctgtg atcaaatgga tttcattctc ctcgccgccc atgatcccgg
      181 ttgcggttga aacatcattc gccacgatcc aatccgcatt ctttcgccgc aactttccct
      241 gggcgtttgc catcaaatca tccgtttctg ccgcgaaacc aataaccagc cgaggccgtg
      301 ccggacccgc agcagcgatc gttgcaagaa tgtcgggatt gggaaccagt tcaaatgtcg
      361 gcgtggtcgc ccccttcttg atcttgccct ccgacgtatt cgccacgcgc caatccgcca
      421 cagcagcggc aaataccgcg gcatcggccg gcagcgctgc cttgcaggcg gccaacatgt
      481 ccgcggcact ttccacccgc cgcaccgcga cgccggcagg atcagggatt gaaaccggac
      541 cactcaccag cgtgaccctc gcgccaagcg acgccagggc agcagcaatc gaatgtcctt
      601 gccggccgga ggaacgattg gcgagataac gaaccggatc gatcggctca tgcgtcgggc
      661 cgctggtaac gatcacatga cgcccagaaa gaagctgctt ccccgacagc gcggcttcga
      721 tcgcagcaag aatttctgac ggttcggcca tgcggccaaa cccgaattcg ttacaggcca
      781 tcgcgccttc attggggccg atgcagccga tgcccctgcc cttcagcgtc gccatattcg
      841 cctgagttgc cgaatgtagc cacatccgca cattcatcgc cggcgccacc aacacgggct
      901 tgtcggttgc cagtaacacc gtcgatgcca gatcatccgc cattccagct gccatcttcg
      961 ccagcatgtt cgccgtcgcc ggcgccacca ccaacaaatc ggcggctcgg gacaattgaa
     1021 tgtgccccat ctcgttttcg tcagttaacg aaaacaaatc agtgtacacc ttggcttcgc
     1081 tcagcgcctg caaggtcaga ggcgtaacga actgcgcgcc gtttgcggtc agaacgcagg
     1141 tcacgccgca gtcggcgcgg cgcagtaggc ggatcagttc cgccgccttg aacgcggcaa
     1201 tcccgccgga aatgatcagc agcacatgtt tgccggacaa tccgctcata accgccaccc
     1261 cgcgtggatc gccgcgatgc cgcccgacaa ctcgcgcaca gtaacgcgag atagtcctgc
     1321 ctccgtcagc atcgttgcca ggctggcctg gtcgggaaag gtgcggatgc tctcggccag
     1381 atagacgtag ctgtcggaat ccccggcggc catttggccc agtcgaggca gtaccttgaa
     1441 tgaccacgcg tcatataaag gttgcagcgc cgccacctgc aatttcgaaa attccagaca
     1501 cagaaaccgt ccgcccggtt tcagcaccct gcgcgcctca cgcagcacct ggggcttatc
     1561 cgtgcaattg cgcaaaccga acgcgatcga cacgcggtcg acgcagcgat ccggcagcgg
     1621 caaatgttcc gcgtcggtca ccaacggcag caacccgccg atcagtcccc gctcgatggc
     1681 gcgatcgacg ccgatccgca gcatcgaggg gttgatgtcg gacaggatcg ccggaccgcc
     1741 accgcggcgc agccagccga aactgatgtc cccggtcccg ccggcgaggt cgagcaacat
     1801 atcccgtggc ctcgggtcca acgcggtgac gaacacgtgt ttccacaccc ggtgcacacc
     1861 gaatgacatg agatcgttca tgaggtcgta gcgcggtgcg acgctgtcga acaccgcgcg
     1921 caccatcgcc gccttctcga cgcgcccgac cttacggtag ccgaaatcga ccggttcgga
     1981 gtgatcactc atgatgcggc atcatagcgc gcctacaccc gatggcggaa ctcccagggc
     2041 ggaggctgtt aaccggcgac ggcgtggaac ggcatccaat atgctgccag ccagtccttg
     2101 ccatcacgac ggcgcgcggc cggaccttgg tagcgcaatc cttcataacc ggcgtccgcc
     2161 atcaggtcag ggcgatcgac gggaataaca actgaagtgc tttgtgacgc ggccgagtag
     2221 gacgcggcgc attttgcgat gatggcgtcg aacattgttg cctcctgtgg cggtgtactg
     2281 ggcgtggtca ttattgaccg aacttacttg cagccggcgt gcgccttgta tgagccagtt
     2341 cacaccagca cgattttttc gaatcacctc gtccggcacc gggtgaaatc gacctccccg
     2401 gaattatcgc tcatgatcaa ccatcacagc gcacggacgc agaatgcccg aacttccaga
     2461 agtcgagacc gtgatgcgtg gcctccaggc ccgcctggag ggccatcgca tcgtccgcgc
     2521 gttcatcaat cgcccagatc tacgctggcc atttccgagc ggactggtcg agcgactgac
     2581 cggtgctgtg gtgctcggtt ttcgccggcg ggccaaatac atcctgatgc ggatcagcgg
     2641 cggcgactcg gtgctgatcc atctggggat gtcggggcga atcgtgctga ccccgggcac
     2701 gcccaacacc gacaccgcgc atgaacacct ggtgctggag atggataacg gctggcgcgt
     2761 gggattcgtc gatccgcggc ggttcggctc ggtcgacctg gtgccaacgg cgcaagagga
     2821 tacgcaccgg ttgctcgccg gcatgggacc agagccgctg gatgacgctt tctctgctgc
     2881 tatgctgaac gacgcgctgg cgggcaaacg caccccgatc aaggcggcgc tgctggacca
     2941 gcgaatcgtt gctggactgg gcaatattta tgtctgtgag gcattgttcc ggtcacgtat
     3001 ct
//
LOCUS       DATAVD010001840         3145 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1290060, whole genome shotgun sequence.
ACCESSION   DATAVD010001840 DATAVD010000000
VERSION     DATAVD010001840.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3145
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1290060"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            146..895
                     /locus_tag="VHX39_35110"
     CDS             146..895
                     /locus_tag="VHX39_35110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extensin family protein"
                     /protein_id="HEX3996431.1"
                     /translation="MAWRLSAFLRHSSRPQGGAGLARVLAFLIAVTFAGMGFLYQNSI
                     HLPPNTLPWEPIDLNAPPNWIAHYQLNALTRDGAVCRTALARTSLGFVPLKDRRVDDA
                     CGFRNVVRADKAPIEFVPHTTATCGLTAALYWYQSALQKAALEHLHSRLVRIDQLGTF
                     ACRNVNSEAVGPRSEHATANAIDVAAFHFADGVTITVARDYDKPTPAGRFLNDAHASA
                     CELFNTVLGPHYNQLHATHFHLDMGSYRVCS"
     gene            complement(902..1549)
                     /locus_tag="VHX39_35115"
     CDS             complement(902..1549)
                     /locus_tag="VHX39_35115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996432.1"
                     /translation="MRIAAEAGKLAPRHGLGRRGFLASAAGMATAFAAMNAVYGPVFG
                     VDPAEAAEPGAAEARATRLSSQFIVDLHTHFIRDDAGSGLEYFAQLREKTRQKHENPE
                     LPDRPATLNDLHLQTYVREMWLDSDTKIAALSGAPSDIKKDWLLPNEVIADARDRINR
                     FAGSRRLLSHFIFTPGQPGWLDERRADLPDEHRAAYRLQGNKRSNRAYGYIRRPA"
     gene            2112..>3145
                     /locus_tag="VHX39_35120"
     CDS             2112..>3145
                     /locus_tag="VHX39_35120"
                     /inference="COORDINATES: protein motif:HMM:NF012879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEX3996433.1"
                     /translation="MSFSVFCATVRATFFAGFFIACVAPAQAAQWPRSDIPPDPAVTF
                     GVLPNGMRYAIMHNSTPTGEVSVRFRIGAGSMQESATQRGLAHFLEHMAFRGSTHVAD
                     GEIDKSLERLGLSFGSDTNASTEQDQTVYQFDLPKSDDQTVDTVLGYTREIASNLTLD
                     PAAAKTEAGVVLSELKLRDKPSFRALQSQLDFMLQDPHATALANGDPAIIAQAPTTLI
                     RDYYQAYYRPERATLIIVGDIDPARMEAKIKERFADWKGTGAAGGDPLLSIAQSRGLE
                     AKLFTEPGASSRILLAWVRPPEPKPDDKAQEKSNLIDVVGLQILNRRLRESAASAARP
                     FTKAGASQDQ"
BASE COUNT          596 a          955 c          935 g          659 t
ORIGIN      
        1 ccgctgatat gggtgccaaa ttctctctcg gtcaccggcg cctcctgaac agacgcgtcg
       61 cgtgccttga tgtattcgtt acagccaaac gcgacaggtc cctgctgcgt tccggaaatg
      121 gaactggttt agccgaggag agccattggc ctggcgactg tcagccttct tgcgacattc
      181 gagccggcca caaggcggcg cgggcctcgc gcgcgttctg gccttcctga tcgctgtgac
      241 ctttgctgga atgggctttc tctatcagaa cagcatccat cttccgccca acaccttgcc
      301 ctgggagccg atcgacctga acgcaccgcc gaactggatt gcccattatc aactgaacgc
      361 cttgacccgt gacggcgccg tctgccggac tgccctggcc aggacatcgc tcggtttcgt
      421 gcccctgaag gatcgccggg tcgatgatgc gtgcggcttt cgcaatgtcg tgcgtgccga
      481 caaggcgccc atcgaatttg tcccgcacac caccgccacc tgcggactga ccgcggcgct
      541 gtactggtat cagtccgcct tgcaaaaggc tgccctggaa cacttgcatt cccggctggt
      601 gcgtatcgac cagctgggca ctttcgcttg ccggaatgtc aattccgaag cggtggggcc
      661 acgcagcgag cacgccaccg ccaatgccat cgatgtggcc gcttttcatt ttgccgatgg
      721 ggtgaccatc acggtggcca gagactatga caagccgacg ccggcaggac gtttcctgaa
      781 tgacgcccac gcgtccgctt gcgaactttt caacacggtt ctggggccgc attacaatca
      841 gttgcacgcg acgcacttcc atctcgacat gggatcgtac cgcgtttgca gctgagcggc
      901 ttcaggcggg ccttcggata tagccgtaag cgcggttgct gcgcttattg ccttgaaggc
      961 gatacgcggc cctgtgttca tccggcagat cagcgcggcg ctcgtccagc cagccgggct
     1021 gtcccggggt gaagatgaag tgtgaaagca ggcgccttga cccggcaaag cggttgatcc
     1081 ggtcgcgcgc gtccgcgatc acctcattgg gcagcaacca atccttcttg atgtcggagg
     1141 gcgcgccgga gagcgccgcg atcttggtat cgctgtccag ccacatctcg cggacatagg
     1201 tttgcagatg caggtcgttg agggtcgcgg ggcggtcggg aagctcgggg ttttcgtgct
     1261 tctgccgcgt tttctcgcgc agctgcgcga aatattccag gccggatccc gcatcgtcgc
     1321 ggatgaaatg ggtgtgcagg tcgacgataa actgggacga caggcgggtt gcccgcgcct
     1381 cggcggcgcc gggttcggcc gcttccgccg gatcgacacc gaacaccggc ccatagactg
     1441 cattcatggc ggcgaaggcg gtcgccatgc cggcggcgct ggccaggaac ccgcgccggc
     1501 caagaccgtg ccgcggcgcc agcttcccgg cctcggcggc gatccgcacc tgaacttcgg
     1561 cctgggcccg ggtttgcggt cccggcagga attcaccgtt cgagaccacc tgggtgggaa
     1621 ccggagaggg aaatgccagg gacgcgggct ccagcagttc cagatcctcc ggcgacagat
     1681 actcgctcat ggttccctcc acatcggcaa ggcaacgacc tggcgcgggc ttcgttgcgc
     1741 gaaagaggag ttgaaagtca cgaaggtgcc gatcaattca cgcgccaaat cagccgcttg
     1801 gagtgatgtt tggcggcgac ggaactgcgc catgtgcgga tatgatcacg gaactcgtca
     1861 tccacgcgct catattatcg gatcgatata gttcggatcc gtcgtatctg ccacgcccca
     1921 ccagaacgcc atcacgggat tccggtatag cctcgagaga atattcggga actttcgtat
     1981 gttcttattg taatatgttc gctattgctc cacttttgaa acctctacaa atcgcgtgcc
     2041 tatactcaca tccttttctc atgaagcggc tgggaaaaga atgctgtctg tcaatgctgg
     2101 gagatgcttt gttgagtttc agcgtgtttt gcgcgacagt tcgcgcgact ttttttgcgg
     2161 gattttttat cgcgtgcgtt gcgccggccc aagccgcgca atggcccaga agcgatatac
     2221 cccccgaccc cgcggtgaca ttcggtgtac tgccgaacgg aatgcgttat gcgatcatgc
     2281 ataacagcac gccgactggc gaggtgtctg tccggtttcg gattggcgcg ggttccatgc
     2341 aggaatcagc gacacaacga ggcttggcgc attttctgga gcacatggcg tttcgcggtt
     2401 cgacccatgt tgcggatggc gagatcgaca aatcgctcga gcggttgggt ctgagcttcg
     2461 ggtccgacac caatgcttcc accgaacagg accaaacagt ctatcagttc gatttgccca
     2521 aatcggatga ccagaccgtc gataccgtgc tgggttacac gcgagaaatc gccagcaacc
     2581 tcacgcttga tcccgccgcc gccaagacag aagcgggtgt ggtcctgtcc gaattgaagt
     2641 tgcgcgacaa gccctcgttt cgcgcgctgc aatcccaact cgacttcatg cttcaggatc
     2701 cccatgccac ggcgttggcg aacggtgacc ccgccattat tgcccaggcc cccaccacgc
     2761 ttatacgcga ctattatcag gcttattatc ggcccgaacg cgcaacctta attatcgtgg
     2821 gtgacataga tcccgcccgg atggaggcca agatcaagga gcggtttgcc gattggaagg
     2881 gcaccggtgc cgccggcggt gatccgctgc ttagcattgc gcaatcgcgc ggcttggaag
     2941 caaagttgtt tacggagcca ggagcgtctt cccgaatctt gttggcgtgg gtgcgaccgc
     3001 cagagcccaa gccggacgac aaggcccagg aaaaatccaa cttgattgat gttgtcggtc
     3061 tgcagatcct gaaccgccgc ttgcgggaat ccgccgcctc cgctgcgcgt ccctttacta
     3121 aggcaggtgc atcacaagac cagat
//
LOCUS       DATAVD010001841         3103 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1662379, whole genome shotgun sequence.
ACCESSION   DATAVD010001841 DATAVD010000000
VERSION     DATAVD010001841.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3103
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1662379"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..748)
                     /locus_tag="VHX39_35125"
     CDS             complement(<1..748)
                     /locus_tag="VHX39_35125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3996434.1"
                     /translation="MMRFLLVLLLLTASAKAEEKVVNVYNWTDYIDPAALKQFTATTG
                     IEVRYDVFDSLETLEGKLLAGSSGYDVVVPSNEPTFSRLIHAGALADIDRAQVPNWKY
                     LDPALMRRVAASDPGNRHGAIYLWGTIGLGANVEKIRAVAPDAPLDSWALLFKPENAK
                     RIAPCGITMMDSAIDVIPSVLKFLGRDPDSNAPADLAAVEQALMAIRPYIRSFASGGA
                     LEALATGQTCLAFDYSGDVTQAAGRAAEAKQ"
     gene            complement(745..1524)
                     /locus_tag="VHX39_35130"
     CDS             complement(745..1524)
                     /locus_tag="VHX39_35130"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3996435.1"
                     /translation="MAKTAAVTGAASGIGQAACRRLLRAGWSVFGLDNARPRLEAVAR
                     GFAGYHDRFQPVLCDVTDAPVVEASFQEIAARAKTLNALVTCAGVLRTALMEDMAIED
                     FDLVLNVNTRGTFLCAQKALPLLRAGAAPDNPSRIVLLSSVAALRPKIVSGAYAASKA
                     AVSQLCRVMAAEWAPSGVLVNALAPGTVDTPMVAAVADPLASKGYRPSGVSPVGRIAQ
                     PDDVVDVMMFLLSDAARYVTGTTIPVDGGTQSAFIPPGSNL"
     gene            1598..2101
                     /locus_tag="VHX39_35135"
     CDS             1598..2101
                     /locus_tag="VHX39_35135"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3996436.1"
                     /translation="MSGDDVSPFGPADLAGPLGRNLLALNNAHAMELSWLEPDQLLRL
                     VSTASLALRIGNVTGLLLAFDQDADYDAGNFLWFRARHTRFVYIDRVVVATAERGRGH
                     ARRLYDAVFTWACDAGHERVVCEVNLDPPNPASDAFHSALRFGEVGTAVIDGGEKTVR
                     YLSRALR"
     gene            2681..>3103
                     /locus_tag="VHX39_35140"
     CDS             2681..>3103
                     /locus_tag="VHX39_35140"
                     /inference="COORDINATES: protein motif:HMM:NF013722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEX3996437.1"
                     /translation="MDNIISSRAFTELDQAEFARISGDFNPIHVDTATARRSGPGALI
                     VHGIHNLLWCIDTIAPAIPGGLSVSGLRVNFDTFVSINEQADVVLVQTSVQQLRAEVR
                     VRGTLALTALIYFGDTLAALPAAKPVDLVNPLAPMDVQF"
BASE COUNT          596 a          952 c          940 g          615 t
ORIGIN      
        1 cttgcttcgc ctcggccgcg cggccggccg cctgggtgac atcgccggaa taatcgaacg
       61 ccagacaggt ttgtccggtt gccagcgcct ccaatgcgcc gccgctggcg aacgagcgga
      121 tatacgggcg gatcgccatc agcgcctgct cgacggcggc aaggtcggcg ggtgcgttgc
      181 tatccgggtc tcggccgaga aacttcagca ccgacgggat cacatcgatc gccgaatcca
      241 tcatggtgat gccgcaaggg gcaatgcgtt tcgcattctc cggtttgaac agcaaagccc
      301 agctgtcgag cggtgcatcc ggcgccaccg cacggatttt ctcgacattt gcaccaagtc
      361 cgatggtgcc ccacagatag atcgcgccgt gccggttgcc cggatccgac gccgccaccc
      421 ggcgcatcaa ggcaggatcc agatatttcc agttcggtac ctgcgcgcga tcgatgtccg
      481 ccaacgcgcc ggcatggatc agccgagaaa acgtcggctc attgcttggc accacgacat
      541 catagcccga gctgccggca agcaatttgc cttccaatgt ctccaggctg tcgaacacgt
      601 cgtagcgtac ttcgatcccg gtcgtggcgg tgaattgctt cagtgcggca gggtcgatgt
      661 agtcggtcca gttataaaca ttgacgacct tttcctcggc ttttgcagaa gccgtcagca
      721 gcaataagac aagcaaaaaa cgcatcataa attggagccg ggcggaatga acgccgattg
      781 cgtgccgcca tcgaccggga tcgtcgtgcc ggttacgtag cgtgcggcat cgctcagcag
      841 aaacatcatg acatcgacga cgtcatcggg ttgcgcgata cggccaaccg gtgacacgcc
      901 cgatggccga tagcccttcg atgccagggg atcagccact gccgccacca tcggcgtgtc
      961 gaccgtgcca ggtgccagag cgttgaccag cacgccggac ggcgcccact cggcggccat
     1021 cacccggcac aactggctga ccgcggcttt ggatgcggcg taggccccgc tgacgatctt
     1081 cggccgcagc gcagcaaccg aggacaacag cacgattcgc gacggattgt ccggcgccgc
     1141 accggcccgc agcaacggca gtgccttttg ggcacagagg aaggtgccgc gggtgttgac
     1201 gttgagcacg aggtcgaagt cctcgatcgc catgtcctcc atcaaggcgg tgcgcagcac
     1261 gccggcacag gtcaccaggg cattgagggt tttcgcccgg gcggcgattt cctggaacga
     1321 tgcctcgacc accggagcgt cggtcacatc gcacagcacc ggctggaaac ggtcatgata
     1381 gccggcaaaa ccgcgcgcca ctgcctccag ccgagggcgc gcgttgtcga gcccgaacac
     1441 cgaccagccg gccctcagca agcgccggca ggcggcctgg ccgatgcccg aggcggcacc
     1501 cgtgacggcg gcggttttgg ccatgggttt ctccagcttc cccggggcat gctatcgtgc
     1561 ccgcgaccac gttaaaacca tctgtggggg gtgcgccatg tccggtgacg acgtatcgcc
     1621 gtttgggccg gccgacctgg cgggaccgtt gggccggaat ttgctcgcgc tgaacaacgc
     1681 gcacgccatg gagttgtcct ggctggagcc ggaccagttg ctccgattgg tcagcacggc
     1741 atcgctggct ctgcggatcg gcaacgtgac cgggttgctg ctggcgttcg atcaggacgc
     1801 cgactacgac gccggaaatt tcctttggtt tcgcgcgcgc cacacccgat ttgtgtatat
     1861 cgatcgagtt gtggtcgcca ctgccgagcg cggtcgtggc catgcccgcc gcctgtacga
     1921 cgccgtcttc acctgggcat gcgacgccgg gcacgagcgc gttgtttgtg aagtcaacct
     1981 ggatccgccc aaccccgcgt cagacgcctt tcattccgca ttgcggttcg gcgaggtggg
     2041 caccgcagtg atcgatggcg gtgaaaagac cgtccgctat ctctcacgcg cgctgcgata
     2101 gcacccggaa tcgttgaatt gtgacacact caatgtgatc gctacgctcg tcgcccaggg
     2161 gagcctcaca tttcattgtg cgcccatttt gagcattcgt ccttcgtgca tagcctggaa
     2221 gcgttccatg ccacgccgca tggtgatccc ggatcactac ctacctggat tgatcgtcgg
     2281 ggcgctctga ggcaggttcg cggcacgagt ccgtggaaac ggcaaacttt cggctttgtt
     2341 aaaagcagca gagcctccaa tcaacttgac attacgacgt caggcgccga aatgagactg
     2401 ctacgagata agcacgcgaa agaccgtcgg tgaccttggc aaggcagatt cctcacaagg
     2461 cggagatgtt accttgtaac gccgggaaaa attagcactc agctcgtcgg tggcggtttc
     2521 catttgtctg tcgcgactca tggctgcctg gctgagggac tgtacggctg cgcgatcatt
     2581 ttaaagtgag gtaaagaaac attcgttcag acgatgccga ctcccttggc gggttggctt
     2641 cgaagagccg ataaagaaat ttggtgggag tagtgtagac ttggacaaca tcatctccag
     2701 ccgcgcgttc acagagctcg accaggcaga atttgcccgc atttcaggtg attttaaccc
     2761 gattcatgtt gacacagcaa cagcccggcg atccgggcct ggtgcgctca tcgtgcacgg
     2821 tattcataac ctgctgtggt gcattgatac aatcgcccct gctattccag gcgggctctc
     2881 agtttctggt ttgcgcgtga atttcgatac gttcgtatca atcaatgagc aggctgatgt
     2941 cgtgctcgtg caaacgagcg tgcagcagct tcgggccgaa gtgcgcgtgc gtggcacgct
     3001 cgccttaacc gcgttaatct actttggcga cactctggca gcgctccccg ccgcgaagcc
     3061 tgttgatctg gtcaatccgt tggcgccgat ggacgtacaa ttc
//
LOCUS       DATAVD010001842         2072 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1290225, whole genome shotgun sequence.
ACCESSION   DATAVD010001842 DATAVD010000000
VERSION     DATAVD010001842.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1290225"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1751
                     /locus_tag="VHX39_35145"
     CDS             <1..1751
                     /locus_tag="VHX39_35145"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3996438.1"
                     /translation="VLLPLLGFSAFLVMRSAEREQDAIAAAARNRTRIAATVISDEIG
                     ALRGRLFLLAGGLSPETSDLSEFHARAKAAFGGMTVILSSASGQEIVNTSVPFGTVLP
                     EAPDPDAIRLVAQQQQPHVADLPRDPVTHRPVITINVPVTQENQPVYVLSLDITSTLP
                     RILGELDIPDGWIAGIFDPQGYQIGRNMDPEPYLGQPARDEFIRHMHAEDAGWVPGKS
                     REGMPVFNAFVHTRPTGWVVDVAIPHDVLLAPVRQTTRSLLLLGGAIVSLAVVLAVTI
                     GRRIAAPVIGLVPIAEAVGRGEPVVPRLTWLREANVVVCSLHGAGEQLRLAATERDAS
                     TAALSQSEQMYRALAEDLARVDEERTALLTRVVVAQEHERQRIARELHDSLAQYLTAI
                     RLKLDTLGRSGASMGEVLNELRSMIGELGRSVNRMAWELRPVALDNLGLHSAIDHYLE
                     EWAEMAGLQVDVQIDLGGRSLPPAVEATLFRVLQEAMTNVTRHADATRVGVILETKDD
                     LVQLIVEDNGRGFPADDSKWPFAATRKFGLHGMRERLALVHGTLDVESAPQAGTTLFV
                     SIPLGRVSLGPGLEAS"
     gene            1748..>2072
                     /locus_tag="VHX39_35150"
     CDS             1748..>2072
                     /locus_tag="VHX39_35150"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3996439.1"
                     /translation="MSDMRLRVLMADDHPIVLAGLKALVQVDPGLQIIGEARDGRTAL
                     RLALSQRPDVVVLDISMPEMNGMEVARALLAEQPECRILVLTVQEDRATLRQLLDMGV
                     AGYLVK"
BASE COUNT          382 a          617 c          691 g          382 t
ORIGIN      
        1 gggtgctgtt gcctctgttg ggcttcagcg cctttttggt catgcgctcg gccgaacgcg
       61 agcaggatgc cattgccgcg gcggcccgca accggactcg catcgcggca accgtgatca
      121 gcgacgaaat cggcgcgctg cgtgggcgcc tgttcttgct ggccggcggg ctcagtccgg
      181 agaccagcga cctgagcgaa tttcatgccc gggccaaagc cgcgttcggc gggatgacag
      241 tgatcctgag cagcgccagc ggccaggaaa tcgtcaatac cagtgttccg ttcggcacgg
      301 tgcttccgga agcccccgac ccggacgcca tacgccttgt cgcccaacaa cagcagccgc
      361 atgttgccga cctgccgcgc gacccggtca cccatcggcc ggtcatcacg atcaatgttc
      421 cggtgaccca ggaaaaccag ccggtttatg tgctgtcgtt ggacatcacc tcgaccctgc
      481 cgcgcatatt gggcgaactg gacataccgg acggttggat cgcagggatc ttcgatccgc
      541 agggctacca aatcggccgc aacatggatc cggagcccta cctcgggcaa ccggcgcgtg
      601 acgaattcat tcgtcacatg cacgccgagg atgcgggttg ggtgcccggc aaatcgcgcg
      661 aaggcatgcc ggtgttcaat gccttcgtgc ataccaggcc caccggatgg gtggtcgatg
      721 tcgcgattcc acacgatgtg ctgctggccc cggtgcgcca gacgacaagg agtctgttgc
      781 tgcttggcgg cgccatcgtg tcgcttgcgg ttgtgctggc ggtgaccatt ggacgccgca
      841 tcgcagcacc ggtcatcggc cttgttccaa tcgccgaagc ggttgggcgg ggggaaccgg
      901 tcgttccgcg cctgacctgg cttcgcgaag ccaacgtggt cgtctgctcg ctgcacggcg
      961 ccggggaaca attacgtctc gccgcgacgg aacgcgacgc ctccaccgcc gccttgagcc
     1021 aaagcgagca aatgtatcgg gcgttggccg aggatttggc ccgggtcgac gaagaacgca
     1081 cggcgctact gacccgcgtc gtggtcgccc aggagcatga gcggcaacgg atcgcgcgtg
     1141 aattgcacga tagtttggcg cagtacctga ccgcgatccg ccttaagctc gatacgctcg
     1201 gtcgatcagg tgcctcgatg ggcgaggtgc tgaacgagtt gcggtcgatg atcggcgaac
     1261 ttggacgatc cgtgaaccgc atggcgtggg agttacgccc ggtggcactg gacaaccttg
     1321 ggctgcacag cgcgatcgac cactatcttg aggaatgggc cgaaatggca ggactgcagg
     1381 tcgatgtgca aatcgacctg ggtggccgga gcctgccgcc ggcagtcgag gcgacgctgt
     1441 tccgagtgct gcaggaggca atgacaaatg tcacgcggca tgccgacgcg acccgggtcg
     1501 gcgtaatcct ggaaaccaaa gacgacctcg tccagttgat cgtggaggat aacggcaggg
     1561 gcttccccgc cgacgacagc aaatggccat ttgcagcgac cagaaaattc ggtttgcatg
     1621 gtatgcgtga gcgattggcg ttggtgcatg ggacactcga cgtagagtca gcgccgcaag
     1681 cagggaccac cttatttgtg agcattccgc tcgggcgggt gtcgctcggg ccgggtctgg
     1741 aggcgtcatg agcgatatga ggctgcgtgt gctgatggca gacgatcatc cgatcgtgct
     1801 ggctggattg aaggcattgg tccaggttga tcccgggtta cagatcatcg gcgaagcacg
     1861 ggatggccgc accgccctgc gacttgcgct gtcacagcgg ccggatgtgg ttgtgctgga
     1921 tatatcgatg cccgagatga acgggatgga agtcgcccgg gccttgctcg ccgaacaacc
     1981 ggaatgccgc atcctggtgc tgaccgtgca agaagaccga gcgaccttgc gccaactgct
     2041 cgacatgggc gtcgccggct atctggtgaa gc
//
LOCUS       DATAVD010001843         2467 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_921769, whole genome shotgun sequence.
ACCESSION   DATAVD010001843 DATAVD010000000
VERSION     DATAVD010001843.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2467)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2467)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2467
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_921769"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..1292)
                     /locus_tag="VHX39_35155"
     CDS             complement(126..1292)
                     /locus_tag="VHX39_35155"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3996440.1"
                     /translation="MEFQIAPQQREMIASVRDLAQTEFKPNAQRWMDGTFPWENMRKL
                     ANLGVLGMSVPEEYGGLGLPILDTALILEEIAKVDYVTAMAVLGEAGVQTRVIAHYAP
                     PSIRERILPRVVSGDCILAVCMTEPHAGTDVANYRTNTRVLSDRIVLKGTKTLISRAR
                     EAGMFVVFSRIDGKPGREGIGCVLLEPDTKGFEVTGTYHTMGGENLHEIQFNDCELPL
                     ENLVIKEDGFRRLLSAFNTQRCLNPSISLGLAEGAFDEAVNYVRERTIFGKPIADFQG
                     IRWKLADMFKDIEAARGLLYRACLTANPFPDPFMAAAAKIFCNEMSLRVTTEAVQVHG
                     GFGFTDEFPVSRFYRGARYGSIGGGASETLRDLIGKKIVGDFDAADGIMGLGTF"
     gene            complement(1306..2271)
                     /locus_tag="VHX39_35160"
     CDS             complement(1306..2271)
                     /locus_tag="VHX39_35160"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3996441.1"
                     /translation="MTDTRPFDPALFSAESVAPDTAALNQQMIQLLTGLPEWWVMGPE
                     AFRAARRRGEGPFPAPVMSSRARTIIITGKDGNEIPLRVIAPANPRGIYLHIHGGGWV
                     LGGADMQDPMLERIADNTGQAVVSVEYRLAPEHPYPAGPDDCETAAAWLVQNGRKEFA
                     TDVLTVGGESAGGHLSAVTVLRMRDRYGYTGFRAANLVYGAYDMSLTPSQRQFGNTRL
                     VLRTIDIQQFYSAFLPTVTDRRVPDISPLYADLRGLCPALFSVGTKDALLDDTLFMHA
                     RWVAAGNPAELAIYPGGAHGFTLFPNELSKAATAKMDAFLNRVLG"
     gene            complement(2268..>2467)
                     /locus_tag="VHX39_35165"
     CDS             complement(2268..>2467)
                     /locus_tag="VHX39_35165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEX3996442.1"
                     /translation="HDLTVHLLAALPNRSYLEVHGFGLDRYIERPIVIRDGVAHAPDT
                     PGHGVAFDWKALEKVREGAKP"
BASE COUNT          527 a          752 c          702 g          486 t
ORIGIN      
        1 ttcgattcgg gcccattgtt cgtccgatag ccaaaaaagg ctgggtttca tgctttgccc
       61 tccgagtcgg agggcagaga ctcaaaaaac catctgattc gctacttgtt ttatgggttt
      121 tgaccctaaa acgtgcccag ccccatgatc ccatcggcgg catcaaaatc gccaacgatc
      181 ttcttgccga taagatctcg aagtgtctcc gacgcgccac cgccgatcga gccgtaacgc
      241 gcaccgcgat aaaaccgcga caccggaaac tcgtcggtaa aaccgaagcc gccatgcacc
      301 tgaacggcct cggtggtgac gcgcaatgac atctcattgc agaagatttt tgccgccgcc
      361 gccatgaacg ggtcagggaa cgggttggcg gtcaggcagg cgcgatataa caaaccgcgc
      421 gccgcctcaa tgtccttgaa catgtcggcg agcttccagc ggataccctg gaagtcggcg
      481 atcggcttgc cgaaaatcgt gcgttcgcgg acgtagttga ccgcttcatc aaacgcgccc
      541 tcggcgaggc caagcgaaat tgaggggttg agacaacgtt gggtattgaa cgcgctcagc
      601 agccggcgga acccgtcttc tttgatcaca agattttcca gcggcaactc gcaatcgttg
      661 aactggattt catgcaggtt ctcgccgccc atggtgtgat aggtgccggt cacctcgaag
      721 cctttggtat ccggctccag caatacgcag ccgatgcctt cgcggcccgg cttgccatcg
      781 atccggctga acacgacgaa catacccgcc tcgcgcgccc ggctgatcag tgtcttggtg
      841 cccttcagaa cgatccggtc actcagcaca cgggtgttgg tacgataatt ggcaacgtcg
      901 gtgccggcat gcggttcggt catgcagacg gcgaggatgc aatcgccgct gaccactctg
      961 ggcagaatgc gttcgcgaat cgatggcgga gcataatggg cgatgacacg ggtttgcacg
     1021 ccggcctcgc ccagtacagc cattgcggtc acgtaatcga ccttggcgat ttcctccagg
     1081 atcagcgcgg tatccagaat tggtaagccc agaccgccgt attcttccgg caccgacata
     1141 ccgagcacgc caaggttggc cagtttgcgc atgttctccc aggggaacgt gccgtccatc
     1201 catcgttgcg cgttcggttt gaactcggtc tgtgccaaat cccgcaccga ggcgatcatt
     1261 tcccgctgct gcggtgcaat ctgaaattcc atttcttgta acctttcagc caagcacgcg
     1321 gttcaggaaa gcatccatct tcgctgttgc tgccttggac agttcattgg gaaacagcgt
     1381 gaaaccgtgc gcgccgccgg ggtaaatcgc cagctcagcc ggattgccgg cggcgaccca
     1441 acgcgcgtgc atgaacagcg tatcgtcgag caaggcatcc ttggttccca cactgaacag
     1501 cgccggacag aggccgcgca ggtcggcata aagcggagaa atatccggca cccgccggtc
     1561 ggtcacggtc ggcaaaaatg cgctgtaaaa ctgttgaata tcgatcgtcc gcagtacgag
     1621 tctggtatta ccaaactgcc gttgactggg tgtcaggctc atatcgtaag cgccataaac
     1681 caggttagcg gcacggaatc cggtataacc gtaacgatcg cgcatcctta acacagtgac
     1741 agccgacaaa tggccacccg ccgactcgcc gccaacggtc aggacgtcgg tggcaaattc
     1801 tttcctgccg ttctgcacaa gccaggcggc agcggtctcg caatcatccg gaccggctgg
     1861 atagggatgc tccggagcca accgatattc cacgctgaca accgcctggc cggtattgtc
     1921 ggcaatgcgc tccagcatcg gatcctgcat gtcggcgcca ccgagcaccc aaccgccacc
     1981 gtggatgtgc aaataaatgc cacgcgggtt ggccggcgcg atcacgcgca atggaatttc
     2041 gttgccatcc ttgccggtga tgatgattgt gcgtgcacgg ctggacatca ccggagcagg
     2101 gaacggacct tcgccgcggc gccgagcagc acggaacgcc tcgggaccca tgacccacca
     2161 ttccggcaac ccggtcagca actggatcat ttgttgattc agcgccgcgg tgtcgggcgc
     2221 gacggactca gcgctgaaca gggccgggtc aaatgggcgc gtgtcggtca tggtttggct
     2281 ccttcccgga ccttttccaa cgccttccag tcaaaggcaa cgccgtgacc cggggtatcc
     2341 ggcgcatggg ctacgccatc ccgaatgaca attggccgtt cgatgtaacg atcgaggccg
     2401 aaaccatgca cttccagata ggaccgattg ggcagtgccg ccaacaaatg caccgtcaga
     2461 tcatgtg
//
LOCUS       DATAVD010001844         3630 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3714088, whole genome shotgun sequence.
ACCESSION   DATAVD010001844 DATAVD010000000
VERSION     DATAVD010001844.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3630
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3714088"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(121..1536)
                     /locus_tag="VHX39_35170"
     CDS             complement(121..1536)
                     /locus_tag="VHX39_35170"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEX3996443.1"
                     /translation="MNQSDDPDVDARNALRLMGPDPANWVPERAGIDHNVTIVGGGQS
                     GCALAFALRRAGIGKVTILEAAPDEQRAGIWLNAARMNLLRTPKTLPGPELGIPALSF
                     QAWYEARHGQEAYAAIDRIRRTDWADYLSWYKDFLNINPRYQTRLARIEAMDDHFRLH
                     LESPNGTTTETTRKIIFATGFAGGGGPIIPDVLSKNLPSSLYAHTEDAIDFAALRGKT
                     VAVIGAAAAAFDAAGVALENGAAAVHLFARRDAIAATPITRSRGFPGAYDNYYQLPDA
                     DRWRQAIRFFRFGSTPTTDAVERAVKFPNFHLHLRSLWASATVNGGQIEAAINGTLHR
                     FDFVIAGTGYSPDIASRPELSDFGDRILLWCDRYTPPAEEQDDLLARHPYLGPGHEFL
                     EKTPDTAPFLKDIHIQNPSGFLSFGLPIGDVPSMKRDIPTIVGRISSNLFRADLDTLR
                     IRMNGNVAPDFTETLYRSAVR"
     gene            complement(1542..2270)
                     /locus_tag="VHX39_35175"
     CDS             complement(1542..2270)
                     /locus_tag="VHX39_35175"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEX3996444.1"
                     /translation="MSSEPLTLAIDIGATGLKAGILDAAGNLVVPHAHGETPSHGTPD
                     QVLDALLGLVQPLGAFDRISVGFPGVVRAGHVVTAPNLDNAAWRDYPLAAALNDHLGK
                     PVRMLNDATVHGLGVIARTGLECVIVLGTGFGFALFDSGRLTPHLELSHHPIRTDIDY
                     DQYVGNAALRSVGRKRWNKRLGRALSCVRNLTLYDTLFIGGGNARHIRLELEKNIHIV
                     PNEAGITGGVRLWDKELDVAFSLG"
     gene            complement(2291..2701)
                     /locus_tag="VHX39_35180"
     CDS             complement(2291..2701)
                     /locus_tag="VHX39_35180"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX3996445.1"
                     /translation="MSFDPAAQGWRLMRSGAMPGGIGFPWAKRSDDGWHYGLVTTAEH
                     ANPQGALHGGILMTFADHGLSLVAWEAAKRAQCTTIQLNTHFLAAVRPGDFVELRGEV
                     TRATLGLVFVRGKLSVGDRDVAAVDGIWRVFRVP"
     gene            complement(2698..>3630)
                     /locus_tag="VHX39_35185"
     CDS             complement(2698..>3630)
                     /locus_tag="VHX39_35185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX3996446.1"
                     /translation="SIAHRVGFAPRNETVHAVDCVSMVIQRGEVVGLVGESGCGKSTL
                     GRMVAGITPPTEGQILFKGRDVATMSGRDARSAKLKVQMIFQDPYASLNPRRRVADIV
                     GEAPLAHGLITRRNFDGYLDAQLHRAGLDPSFKRRYPHQFSGGQRQRIGIARALAVQP
                     EFLVCDEAVAALDVSIQAQILNLFMDLRRELDLTYLFISHDLGVVEHLSDRVLIMYLG
                     RIVESASAEEIFGRANHPYTRALLAEVPRIEARKQRFTAITGEIPSPLNPPPGCHFHP
                     RCPHAMPHCSVEVPTFREIAPGHHSACHLNEVAT"
BASE COUNT          766 a         1074 c         1104 g          686 t
ORIGIN      
        1 ggcggcgtcc cgtcgcgagc agaccagtag tgctgttgcg caacggagcg ggactacccc
       61 tcggcacagc ggaccacgac gtcctcgttt cgtgctgctc cgaaagatgg ttcgatccat
      121 ttaccgcact gcggatcgat acagggtctc agtgaaatcg ggtgcgacgt tgccgttcat
      181 gcgtattcga agcgtatcaa ggtcggcacg gaataaattg gaactgatcc ggccaacgat
      241 tgtcggaatg tcacgtttca tgcttggaac atcgccgatc ggcaggccga aactcaggaa
      301 tccggacggg ttctgaatgt ggatgtcctt caggaacggc gcggtatccg gggtcttctc
      361 caggaactca tgcccagggc cgagataggg atggcgggcg agcaggtcat cctgctcctc
      421 ggcgggtggc gtgtagcgat cgcaccaaag caatatgcga tctccgaagt cgctcagctc
      481 cggacgtgag gcgatgtccg gagagtagcc ggtgccggcg atcacgaaat cgaaccggtg
      541 cagagtgcca tttattgctg cttcgatctg accaccgttc actgtcgcgc tggcccaaag
      601 tgaccgcaga tgcagatgga aattggggaa tttaacggcc cgttcgaccg cgtcggtggt
      661 tggagtggaa ccaaagcgga agaatcggat tgcctggcgc caacgatcgg catccggcag
      721 ttgatagtaa ttgtcgtatg cgccaggaaa gccgcgcgac cgcgtgatcg gagtcgcggc
      781 gatcgcgtcg cggcgagcga acaaatgaac ggctgccgcg ccgttctcca gcgccacgcc
      841 agctgcgtcg aaagcggcgg cggcggcgcc gattacggca acggttttgc cacgcagcgc
      901 ggcgaaatcg attgcgtcct cggtatgcgc gtacaaagat gacggcagat tcttgctcag
      961 aacatcggga atgatcgggc ccccgccgcc tgcaaagccg gtagcgaaaa tgatcttccg
     1021 agtggtttcc gtcgtcgtgc cattcggcga ttcgagatgc agccggaaat gatcgtccat
     1081 cgcttcgatg cgggccagcc gggtctgata ccgtgggttg atgttcagaa agtccttgta
     1141 ccaggaaaga taatccgccc aatcggtacg ccggatacga tcgatggcgg cataggcctc
     1201 ctggccatgc cgagcctcgt accacgcctg aaaacttagc gccggaatgc cgagttccgg
     1261 tccgggtaac gtctttggtg tgcgcagcaa attcattcgc gcggcgttca gccagatgcc
     1321 ggcgcgttgt tcgtccggcg cggcctcaag gatggtgacc ttgccaatcc cggcgcggcg
     1381 cagcgcgaaa gccagcgcgc atccggattg cccgccaccc acaatcgtca cattgtgatc
     1441 gatgccagca cgctcaggaa cccaattggc gggatccggg cccatcagcc gaagtgcgtt
     1501 cctggcatcc acgtccggat cgtcagactg gttcatcgtc ctcaccccaa tgaaaaggct
     1561 acatcgagct ctttgtccca gagccggact ccgccggtaa ttccggcctc attcggcaca
     1621 atatggatat ttttttccag ctccaaccga atgtgccgcg cgttaccacc accaataaac
     1681 agcgtgtcat aaagtgtcag gttccgcacg cagctcaggg cacggccgag ccgtttgttc
     1741 caccgcttgc ggccgaccga tctcaatgcc gcgttaccaa catattgatc gtaatcaatg
     1801 tcggtgcgaa ttgggtgatg ggacagttcc aggtgtggcg taaggcgtcc gctgtcgaac
     1861 agtgcgaagc caaaaccagt tcccaacacg atgacgcatt caaggcctgt gcgcgcgata
     1921 acacccagac cgtgcaccgt cgcatcgttt agcatgcgga ccggtttgcc cagatgatcg
     1981 ttcagtgcgg ctgccagcgg ataatcgcgc caggcggcat tgtcgagatt gggtgccgtc
     2041 acgacgtggc cagcgcgcac aacaccgggg aatcccacgg agatccgatc gaacgcaccc
     2101 agcggctgga ccaatccgag caacgcatcc agcacctgat ctggggtgcc gtgactcggg
     2161 gtttcgccat gcgcgtgcgg cacaaccaga ttgcctgcag catcgagtat ccccgcctta
     2221 aggcccgtgg cccctatatc gatggcgagg gtcagcggtt cggagctcat catttcatcc
     2281 tgttgggtgg tcagggcacg cgaaacacgc gccagatgcc gtcgacagcc gcaacgtcgc
     2341 gatcgccgac cgataactta ccgcgaacaa acacgagtcc caatgtcgcc ctggtgacct
     2401 cgccgcgcag ttcgacaaag tcgcccggcc ggaccgcggc aaggaagtgg gtattcaact
     2461 ggatcgtggt gcactgtgcg cgttttgccg cttcccaggc aaccaaactc agcccgtgat
     2521 cggcgaacgt catcaggatg ccgccatgca gggcgccctg cggattggcg tgctccgccg
     2581 ttgtcaccag gccgtaatgc caaccatcgt ccgatcgctt tgcccatggg aaaccgatcc
     2641 caccgggcat ggctccgctt cgcatcaggc gccagccttg cgcggccgga tcgaaactca
     2701 tgtggcgacc tcattcaaat ggcaggcact gtggtgaccc ggcgcgatct cgcggaatgt
     2761 ggggacctcg accgagcagt gaggcatcgc atgcgggcaa cgcggatgga agtggcagcc
     2821 cggcggcggg ttgagtgggc ttggaatttc accggtaatc gcggtgaaac gctgcttcct
     2881 ggcttcgatg cgcgggacct cggcgagtaa tgcgcgcgta taagggtgat tggcgcggcc
     2941 gaagatctct tcggcagatg cggattcgac gatgcggccc agatacatga tcaacactcg
     3001 atctgacaga tgctcgacga cgccaagatc gtgactgatg aacagataag tcaaatccag
     3061 ctcgcgccgg aggtccatga acaagtttag aatttgggcc tggatcgaca cgtcgagagc
     3121 ggcgaccgcc tcgtcacaaa cgagaaactc cggttgtacc gcgagcgccc gcgcgatgcc
     3181 gatgcgctgc cgctgaccgc cagagaactg atgcggatag cggcgtttga aggatggatc
     3241 gagaccggca cgatgcagtt gtgcgtcgag gtacccatcg aagttgcgcc gggtgatcag
     3301 accatgagcc aaaggagcct cgccgacgat gtcagcaacc cgacggcgcg ggtttaatga
     3361 cgcgtacgga tcctgaaaga tcatttgtac tttcaatttg gcagatctgg catcgcgccc
     3421 agacatcgtg gcgacgtcac gacccttgaa taaaatctga ccttcggtcg gcggcgtgat
     3481 accggcaacc atgcgcccaa gggtagattt accgcagcca gattcgccaa ccaggccaac
     3541 gacctcaccg cgttggataa ccatactgac acaatcgacg gcatgcacgg tttcattgcg
     3601 cggcgcaaat ccaacgcgat gggcgatgga
//
LOCUS       DATAVD010001845         1806 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_733584, whole genome shotgun sequence.
ACCESSION   DATAVD010001845 DATAVD010000000
VERSION     DATAVD010001845.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1806
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_733584"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(57..416)
                     /locus_tag="VHX39_35190"
     CDS             complement(57..416)
                     /locus_tag="VHX39_35190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEX3996447.1"
                     /translation="MLWAGTAGLLDRLRVICLALPEAAEKETWEIPTFRIRDKIFAMA
                     HDPATVWCKAPRGVQAILVGAAPDRFFVPPYVGHKGWIGFHLDRTTDWAEVAALICRS
                     YRMTAPKRLAELVSDEA"
     gene            complement(416..1291)
                     /gene="kdsA"
                     /locus_tag="VHX39_35195"
     CDS             complement(416..1291)
                     /gene="kdsA"
                     /locus_tag="VHX39_35195"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEX3996448.1"
                     /translation="MDFPEHGSTHGLTQSTTVPRVVRVGAIAVGNHLPFVLIAGPCAI
                     ESRAHAIEIADALRSMSAATGVPVIYKSSYDKANRTSASSRRGIGMAEGLAILAEVRE
                     RFGLSVLTDVHGPEQCAPAAEAVDVLQIPAFLCRQTDLLLAAGSTGKVINVKKGQFLA
                     PWDMQHVAAKIASTGNHNVMLCERGASFGYNTLISDMRSLPIMARTGYPVVFDATHSV
                     QQPGGQGASSGGEREFAPVLARAALAIGVAAVFIETHEDPDRAPSDGPNMIPLREMPA
                     LIARLKAYDDLTKSG"
BASE COUNT          339 a          556 c          556 g          355 t
ORIGIN      
        1 ggttcagttg tgggaaatag gggggtgtgg cgttgcaacg gatgccgcgc cgaaatctac
       61 gcctcgtcgg agacgagttc cgcaagtcgt ttcggcgcag tcatacgata gctgcggcaa
      121 atcaacgcag cgacttcagc ccagtcggtg gtgcgatcga ggtggaaccc gatccaacct
      181 ttatgaccaa cgtacggcgg cacaaagaac cggtccggcg cggctccgac caggattgcc
      241 tgcacaccgc gcggcgcctt gcaccagact gtagccgggt catgcgccat ggcgaagatt
      301 ttgtctcgta tccgaaacgt cgggatctcc caggtctctt tctccgctgc ctccggcaac
      361 gccagacaaa tgactcgcaa ccgatcgagc aatcctgcag tcccggccca gagcattatc
      421 cactcttggt cagatcgtcg tacgctttca ggcgggcgat cagcgccggc atctcccgca
      481 acgggatcat gttcgggccg tcactgggtg cgcgatccgg gtcctcgtgg gtttcgatga
      541 acaccgcagc cacgccgatg gccaatgcag cccgcgccaa taccggggcg aactctcgct
      601 ctccgccgga cgaggcccct tgcccccctg gttgctgcac cgaatgggtc gcgtcgaaca
      661 ccaccgggta gccggtgcgc gccatgatcg gcaaagaccg catgtcggag atcagtgtat
      721 tgtagccgaa gctcgcgccg cgttcgcaca gcatcacgtt gtgattgccg gtgctggcga
      781 tttttgcggc gacgtgttgc atgtcccagg gcgccaggaa ctggcccttc ttcacgttga
      841 tgaccttgcc ggtcgagccc gctgccagca acaggtcggt ctgccggcac aggaaggccg
      901 ggatttgcag cacgtcgacc gcttctgccg ccggagcgca ttgctccggg ccgtgcacgt
      961 cggtcagtac ggacaggcca aagcgctcgc gtacctcggc caggatggcg aggccttccg
     1021 ccatcccaat gcctcgccgg gacgacgcgc tggtgcggtt cgctttgtcg tagctggact
     1081 tgtagatcac cggcactccg gtcgccgcgg acatcgagcg cagcgcatcg gcgatctcga
     1141 ttgcatgcgc gcgggattcg atcgcgcaag ggccggcgat cagcacgaag ggcaggtggt
     1201 tgccgaccgc gatggcgcca acgcgcacaa cgcgaggcac agtggttgat tgcgtgaggc
     1261 cgtgggtgct gccgtgttca gggaaatcca tgtctcacct ctttgccgga gagattgtcc
     1321 gtcaggatgt gttggcgtcg caagcccgca gcgaccagcg tcggtacctc gatttgtgaa
     1381 tcataggctg ggatttgtga atcataggct ggtttcgttc ggccaccatg ccggcccttc
     1441 ctggccaaga agccgaggca atgcgcagaa ggcaagcggc tgatctacaa actgaccgat
     1501 gccagttttt ggattgcccc gtgacaccgt tcgcagccat cggccggact ttgcgataag
     1561 cgacgttttc gcccaccgga tccggtccct atcaggacgc accggtctcg tgacagccgg
     1621 ccgggcttgt tagcacaggc cagaaagtga atgaacatca acgcgcttta gaacctcggt
     1681 tttcccaaga agagacatac ctttgaaaat atgcgcacgg agcgtgccgt ccggttcaaa
     1741 ctcggcggcc agttgataaa caatctcgtt gtcgggatct acgatggaac cgccttccca
     1801 ttggtt
//
LOCUS       DATAVD010001846         2017 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1104044, whole genome shotgun sequence.
ACCESSION   DATAVD010001846 DATAVD010000000
VERSION     DATAVD010001846.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2017
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1104044"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VHX39_35200"
     CDS             complement(<1..231)
                     /locus_tag="VHX39_35200"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX3996449.1"
                     /translation="MSAIRDASARSGTNFDLMLASARLESGLDPSAQAGTSSATGLFQ
                     FIDQTWLAAVRQYGPQHGLAADAALVVQRDGRL"
     gene            447..1337
                     /gene="motA"
                     /locus_tag="VHX39_35205"
     CDS             447..1337
                     /gene="motA"
                     /locus_tag="VHX39_35205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HEX3996450.1"
                     /translation="MWQLIGLAGVFVTIGVGYTIAGGHFGVIIEAVGPELLVILGPGA
                     MTLLISNEMSTVKSVLGGFKKVVSGPCWRRTDYADALCLLFLLFRITRQEGNLALERH
                     IEDPGNSPIFTRYPRLVADHHFVAFVADVFRAITLNFTDPWKVGEMMDTEIDKWHEED
                     LRAPKALSTMADALPALGIVAAVLGVIKAMGAINEAPDILGHMIGSALVGTLLGVFMS
                     YGLFGPIATRLKGVLEEEGVMLGIVRQMITSHLEGLGPQLAVEVGRKSIPTRFQPSFD
                     ELDKLLTETARSTRPKGDGG"
     gene            1334..>2017
                     /locus_tag="VHX39_35210"
     CDS             1334..>2017
                     /locus_tag="VHX39_35210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996451.1"
                     /translation="MTGHSLTWFAVAGILLSAGPGPVLAQTQLNAKAAQKAAALTPTS
                     LAVPRPNDPPEIDTAPASTSQADTPPIAITPPDTSLSGASPNSTSKSAPHHNSSPAAA
                     KGVLVVTTQHPGWGRIGFALRGNPAPVVHPVPGGIEVHLAPGIHLEVPPSAQLRETGP
                     IEVRDEGGAAVAVIHLTCHCSPEQDNGPDFLRLDIHQDPAPPPVALPVPAAGKDVAAK
                     TETTPSQETA"
BASE COUNT          382 a          626 c          644 g          365 t
ORIGIN      
        1 cagacgtccg tcgcgctgca ccactaacgc cgcgtcagcg gcaagaccat gttgcggccc
       61 gtactgccgc accgccgcga gccatgtttg gtcgatgaac tggaacagac ccgtggcgga
      121 ggacgtgccg gcctgagccg agggatcgag cccgctctcc agccgggcgg acgccaacat
      181 caggtcaaaa ttcgtgccgc tacgtgcgct ggcatcgcga attgcgctca ccacggatcc
      241 tgccccctgg agcgccaccg gaatggcggc cgcaggagct gtagtgatgg ggttggcaac
      301 cggaacattg atcggcaccc ggatctcccg cattgaagtt tgcgaaaatt agtactggca
      361 ggcagttttg cgagatgcta taggctcgaa tatgccttgc gaaacgcgag gatgtcaaca
      421 ccgaagcagg gtcgcagaca tcagccatgt ggcaattgat cggtttagcc ggcgtcttcg
      481 ttacaatcgg cgtcggatac acgatcgcgg gcgggcattt cggcgtcatc atcgaggcgg
      541 tcgggcccga attgctggtc attctcgggc ccggagcaat gacactgctg atctccaatg
      601 agatgagcac ggtgaagtcc gtgctcggcg gcttcaagaa ggtggtctcg ggcccatgtt
      661 ggcggcgcac cgactatgcc gacgccttgt gcctgctgtt cttattgttc cggatcaccc
      721 gccaggaagg caacctcgcg ctggaacggc acatcgaaga cccgggtaat tcgccgattt
      781 tcacccggta tccccggttg gttgccgatc accactttgt cgcgtttgtt gccgacgtgt
      841 ttcgcgccat cacgctgaac ttcaccgatc cctggaaggt cggcgaaatg atggataccg
      901 agatcgacaa atggcacgaa gaagacctgc gtgctccaaa agcgctgtcc accatggcgg
      961 acgcgctgcc cgcactgggc attgtcgcgg cggtgctggg tgtcatcaag gcaatgggag
     1021 cgatcaatga ggcgccggat attctgggcc acatgatcgg ctcggcgctg gtcgggacat
     1081 tgctcggtgt ttttatgtcc tacggcctgt tcgggccgat cgccacccgc ctgaagggcg
     1141 tgctggagga agagggcgtc atgctgggga tcgtccgtca gatgatcacc tcgcatctcg
     1201 aggggctggg gccgcaactc gcggtcgagg tcggacgcaa atcgataccc acgcggtttc
     1261 agccaagttt tgacgaactc gacaagctgt tgaccgaaac ggcgcgcagc acgcgtccga
     1321 aaggggacgg aggatgaccg gccatagcct gacctggttc gccgtcgccg ggatcctgtt
     1381 gtcggctggc cccgggccgg tgctggcgca aacacagtta aatgccaagg cggcacagaa
     1441 ggccgccgcg ttgacgccaa cgtcgttggc ggtccctcgg ccgaacgatc cgccggagat
     1501 tgatacagct ccggccagca cgtctcaggc ggatacgcca ccaatcgcga taacgccgcc
     1561 cgacacatcg ctgagcggcg cctcgccaaa cagtacaagc aaatctgcgc cgcatcacaa
     1621 ctcctcgccg gcggcagcga agggggtcct cgtcgttacc acgcagcatc ctggctgggg
     1681 gcggatcggc ttcgcgctgc gcggcaatcc ggccccggtt gtgcatccgg tgccaggcgg
     1741 gatcgaggtg catcttgcgc ccgggatcca cctggaggtg cccccctcag cccaattgcg
     1801 agagacgggt ccgatcgagg ttcgtgacga gggcggggcc gcggtcgcgg tgatccatct
     1861 cacttgtcat tgctcgccgg aacaggacaa cggccccgac ttcttgcgcc tggacattca
     1921 ccaggatcca gcgccgcctc ccgtggcact gcccgttccc gcggcgggga aagacgttgc
     1981 ggcgaaaacg gagaccaccc catcgcagga aactgcc
//
LOCUS       DATAVD010001847         2414 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1662638, whole genome shotgun sequence.
ACCESSION   DATAVD010001847 DATAVD010000000
VERSION     DATAVD010001847.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2414
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1662638"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..615
                     /locus_tag="VHX39_35215"
     CDS             <1..615
                     /locus_tag="VHX39_35215"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEX3996452.1"
                     /translation="LWSKEFYETDPSRDFVRGYTLQFARSGGVVSEAVDSESRRLLPW
                     GAEHHQVMRQIFHKRLRIGIACEDLPEEHNRVTLDPVLKDSHGIPAPRIDYVISENTR
                     RMMEHGIARASEILTAAGAVNLFTSRTALNTPGHLLGTARMGNDPERSVVNEWGRAHD
                     VRNLFIVDGSIWVTSGGVNPTSTIQALALYVADSMKRRLATLFD"
     gene            625..1068
                     /locus_tag="VHX39_35220"
     CDS             625..1068
                     /locus_tag="VHX39_35220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996453.1"
                     /translation="MSELTPVESRDLRCIAGMMIPASAEFNVPGADDAVIFADIVGTM
                     GRDTAHVREALGALASLAGGPVADQDAARRDAVVLAFRERGGPAAATLSRVILQCYYR
                     DDRVVQSLGLEPRPPFPKGHTLEQGDWSLLDPVRKRAKLWRDAPP"
     gene            1065..2036
                     /locus_tag="VHX39_35225"
     CDS             1065..2036
                     /locus_tag="VHX39_35225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996454.1"
                     /translation="MTGVRVVRLCDGPIIAPWLHPSIGVNIQGPSLIRVPDWADGSLG
                     TYYLYFADHKGSYIRLAYADALTGPWQVHPPGSLQLAQSRFLTEAPVPSAKELAAWQA
                     RYRSAAISHDVLSEITTPHIASPDVHVDEVGRRIVMYFHGLEAVGTQITRVATSHNGI
                     EFAAQQEVLGRSYFRVFHYNGLTYALAMPGQLYRSRDGLTGFEAGPVLFNPNMRHAAL
                     LRRGTELLVFWTQVGDAPERILLSRIDLSGDWMQWRDGPAIEVLRPERSWEGADAPVV
                     PSVRSTAYGMVNQLRDPAIYEEDGRIYLLYAVAGESGIAIAEVLLDT"
     gene            complement(2187..>2414)
                     /locus_tag="VHX39_35230"
     CDS             complement(2187..>2414)
                     /locus_tag="VHX39_35230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996455.1"
                     /translation="QALANGFLRPLGETGMLTVDSPFSLSGADKVPVGMAPGFGEHGA
                     EILREVGYGQEEIAALRQAGVVGGGEQGGRS"
BASE COUNT          448 a          706 c          792 g          468 t
ORIGIN      
        1 ctatggagta aggaatttta cgagaccgat ccatcgcgcg actttgtgcg cggctacacg
       61 ttgcagttcg cccgtagcgg tggcgtggtc agcgaggcgg tcgacagcga atcccgccgc
      121 ctgctgccct ggggcgccga gcatcaccag gtgatgcgac agatattcca caaacgcctg
      181 cggatcggga tcgcctgcga ggatctgccg gaggaacaca accgggtcac actcgatcct
      241 gtgctgaagg acagtcacgg catacccgcg ccgcggatcg attacgtgat cagcgaaaat
      301 acccgccgca tgatggaaca cgggattgcg cgagcatcgg aaattctgac cgcggccggt
      361 gcggttaact tgttcacgtc acgcactgcg ctgaatacgc cgggacattt gctgggaacc
      421 gcgaggatgg gcaacgatcc ggagcggtcg gtggtgaatg aatgggggcg ggcgcacgat
      481 gtgcggaacc tgttcattgt cgatggcagc atctgggtga cttcgggcgg agtgaacccg
      541 acctcgacca ttcaggcact ggcactttat gtcgccgaca gcatgaaacg gcggctggcc
      601 acattgttcg attgaggtga agctatgagc gaactgactc cggtggaaag ccgggacttg
      661 cgttgcatcg ccggaatgat gatcccggcc tcggcggagt tcaacgttcc gggtgccgac
      721 gatgcggtca tcttcgccga tatcgtcggt acgatgggcc gcgatacagc gcatgtgcgg
      781 gaggcgttgg gtgcactggc gtcactcgcc ggcggcccgg ttgccgacca ggacgcggcg
      841 cggcgcgacg cggtggtgct ggcgtttcgg gaacgcggcg ggcctgcggc ggcgacactt
      901 tctcgggtga ttctgcaatg ttattaccgg gacgaccggg tggtgcagtc cctgggactg
      961 gaaccgcgac cgccgtttcc gaaggggcat acgctggagc agggtgattg gtcactgctc
     1021 gatccggtgc ggaaacgggc gaagctgtgg cgtgacgcgc cgccgtgacc ggcgtacggg
     1081 tggtgcgact gtgcgacggc ccgatcatcg cgccgtggtt gcatccaagt attggtgtga
     1141 acatccaggg accatcgcta atccgcgtgc ccgactgggc cgatggcagt ctggggacgt
     1201 attatcttta ctttgccgat cacaaaggca gctacataag gctggcttac gcggatgctc
     1261 tgaccggacc gtggcaggta catccgcccg gcagcctgca actggcccag tcgagatttc
     1321 tgaccgaggc accggtgccc tcggcgaagg agttggcggc atggcaggca cgttaccgga
     1381 gtgcagcgat ttcgcacgac gtgctgtcgg agatcacgac accgcacatt gcctcgcccg
     1441 acgtgcatgt cgatgaagtt gggcgacgga tcgtcatgta ctttcacgga ttggaggcag
     1501 ttggcaccca gatcacccgg gtggcgacgt cgcacaacgg tatcgagttc gccgcacagc
     1561 aagaagtcct cggccgttca tacttccgag tgtttcacta taacggcctg acttacgccc
     1621 ttgccatgcc tgggcaactt taccgatccc gtgacggttt gacggggttc gaagctggcc
     1681 cggtgttgtt caacccgaac atgcggcatg ccgcgttgtt acggcgagga accgagttgc
     1741 tggtgttctg gacccaggtt ggcgacgcac cggagcggat cttgctaagc cggatcgatt
     1801 tgtccggcga ttggatgcag tggcgggatg ggccggcgat tgaggttttg cggccggagc
     1861 gaagctggga aggcgctgat gcgccagttg tgccgtcggt gcgcagcacg gcttacggaa
     1921 tggtcaatca attgcgggat ccggcgatct atgaggaaga tggacgcatt tatctgcttt
     1981 atgcggtcgc cggcgaaagc ggcatcgcga tcgccgaagt tttgctcgac acgtaggctg
     2041 tgccgcctgt catgatcatt ggttcgtaac cgttccggaa cagaaaatgg ctgcgtcgaa
     2101 tgtcaccggc gatgcgtggt cgcgatcgag ggatgggtct gatccaaaat gcccagacag
     2161 cgcactgccg tgtaccgcga ccgcgctcag gatcggccgc cctgttcccc accgccaaca
     2221 actccggcct gccgcagcgc ggcaatttcc tcctggccgt aacctacctc gcgcaagatc
     2281 tcagccccat gctcgccaaa tcccggcgcc atccccaccg gcaccttgtc cgctccgctc
     2341 agcgagaaag gactatccac cgtcagcatc ccggtctccc ccaacggccg caggaaccca
     2401 ttggccagcg cctg
//
LOCUS       DATAVD010001848         3216 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1473763, whole genome shotgun sequence.
ACCESSION   DATAVD010001848 DATAVD010000000
VERSION     DATAVD010001848.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3216
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1473763"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            263..1240
                     /locus_tag="VHX39_35235"
     CDS             263..1240
                     /locus_tag="VHX39_35235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3996456.1"
                     /translation="MQRTGTALRRTAVQAVPTMLGIIVLCFLLLHLVPGDAADVLAGE
                     NGSATAETMAALRHQFGLDQPLLAQLVSYLDHLAHFNLGYSARFGMPVSQLILERLPN
                     TLLLMVSALGMALVLGILAGWVMAIFAGRWPDRVLQVVVLLFYSTPGFWIGLMAIVLF
                     SVKLGWLPSNGSETVGEPLSGLGFLADRASYLVLPSLALSSFFIAVYARLTRATMLEV
                     LGQDFMRTAAAKGLHPVAIQFRHALRNALIPVTTVAGIHLGNLLGGAIVVETVFGWPG
                     MGRLAMEAVLGRDFNLLLGVLLLSSLLVIVANAGVDLLQAWLDPRIQET"
     gene            1242..2339
                     /locus_tag="VHX39_35240"
     CDS             1242..2339
                     /locus_tag="VHX39_35240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3996457.1"
                     /translation="MSEVAQKRVSNGIQGPIDRGAMPVGSALRDMLAADVSPGDAGPN
                     CPPDFQQSGVARGGGAKWADVLQRGGLFSGLLSRDQPRGVPTRRGHRLLRAGMRNSSF
                     LLGLLILLSVIGIALAANHLFPGDPQDMLGVPTLWPGQDPQFPLGTDSLGRDVASGLA
                     HGARVSLLVGVSAAAIGLIIGTLIGAFAGYFGGWLDVALVRLTELFQTVPTFLLIIVI
                     VAIGQPSATVIALAIGVSSWPTVARLVRAQFRSLREAEFIAASRSLGYGAPRIIFAEI
                     LPNAMAPIIVTASVMVANAILTEAGLSFLNMGDPNLISWGSMIGDGRPLLRTAWFLCA
                     LPGGAIAVTVLALNLVGDGLNDLLNPRSGLL"
     gene            2339..>3216
                     /locus_tag="VHX39_35245"
     CDS             2339..>3216
                     /locus_tag="VHX39_35245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3996458.1"
                     /translation="MAPVLDVRDLAVGFPGHVVVHGVSFHIDPGETLALVGESGCGKS
                     VTAFALMRLLPSTARILRGEVWFDGTDLVTASVQKMRDVRGKQISLIQQEPMTSLNPV
                     LTVGAQIAEVIRRHEALSRAATRGRVEELLDMVGIPEPQRRADEFPHNFSGGMRQRVM
                     IAMAVACRPRLIIADEPTTALDVTIQAQVLDLLDGLRRQLGMAVLLITHDLGVVAQWA
                     DRTSVMYAGRIVEQTLVRPFFRHPRHPYARGLLGASVNEADSPAGGADGWHYTTRRLN
                     EIAGSVASAAGEPGCS"
BASE COUNT          459 a         1048 c         1058 g          651 t
ORIGIN      
        1 tggacgattt aaggcaattt ggttaaattc caggcgaacc gatctccggc gtgcccaatc
       61 aggcgtgtct gcgatgttgc actgcggcat gcgatgatgc agcctgctgc ccaggctcgg
      121 tccctggctg attggcacat atcgatcggc tcgaccgcga tcctcgggag gcatggatct
      181 tgcccgctcc agacgagcga aaggcgagtt ccgctacggg caccagaccc gcacagcaac
      241 aaactgccaa caggaggccg cgatgcaacg caccgggacc gcgttaaggc gcaccgcagt
      301 tcaggcggtg ccgacgatgc tcggcatcat cgtgttgtgt ttcctgttgc tgcacctcgt
      361 gccgggcgat gccgcggatg tgctggccgg cgagaacggc tcggccaccg cggaaaccat
      421 ggccgcccta cggcaccaat tcgggctgga tcagccgctg ctggcgcaat tggtcagcta
      481 cctggaccac cttgcgcatt tcaatcttgg ctactcggcc cggttcggca tgccggtctc
      541 gcagctcatc ctcgagcggc tgcccaatac gttgctgctc atggtttcgg ccctcggtat
      601 ggcgctggtg cttgggatcc tcgcgggctg ggtgatggcg atctttgctg ggcgttggcc
      661 ggatcgcgtg ctgcaggtcg tggtgctgct gttctactcc acgccgggtt tctggatcgg
      721 cttgatggcg atcgtgctgt tctcggtgaa gcttggctgg ctgccgtcca atggcagcga
      781 aaccgtgggc gaaccgctgt cagggctcgg tttcctcgct gaccgggcgt cgtatctggt
      841 gctgccttcg ctcgccctct cgtcgttctt catcgcggtc tatgcgcggc tgacccgggc
      901 gacgatgctc gaggttctgg gccaggactt tatgcgcact gcggccgcca aggggctgca
      961 cccggtcgcg atccagttcc gccacgcttt gcgcaacgcc cttatcccgg tcaccaccgt
     1021 tgcaggcatc catctcggca acctgttggg cggcgccatc gtcgtggaga ccgtgttcgg
     1081 ctggccgggc atggggcgcc tcgccatgga ggctgtactc gggcgggact tcaacctgct
     1141 tctgggcgtg ctgctgctgt cctcgcttct ggtcatcgtg gccaacgcag gggtcgacct
     1201 gctgcaggcc tggctcgacc cgcgcatcca ggagacctga catgagcgaa gtcgcccaga
     1261 agcgggtgtc caatgggata cagggtccga tagaccgggg tgcaatgccg gtcggctccg
     1321 cactgcgtga catgctggcc gccgacgtat cgccgggtga cgccggcccg aattgccccc
     1381 cggatttcca gcaatcaggc gtcgcgcgag gcggcggcgc aaaatgggcc gacgtcctgc
     1441 agcgtggtgg gctgttcagc ggcctgctgt cacgtgacca gcccagaggc gtcccgacac
     1501 gtcgcggcca ccgcctgttg cgcgccggga tgcgaaattc gtcctttctg ctcggtctgt
     1561 tgatcctgct ttccgtcatc ggcatcgccc tcgccgccaa ccacctcttc cccggagatc
     1621 cccaggacat gctcggggtg ccgacactct ggcccggcca ggacccgcaa ttcccgctcg
     1681 gaaccgacag tctgggccga gatgtcgcct cgggcctcgc ccatggtgcg cgggtgtcgc
     1741 tgctggtcgg ggtctcggcg gcagcgatcg ggctgatcat cggcacgctg atcggcgcat
     1801 tcgcaggcta tttcggcggg tggctggatg tcgcgctggt ccgcctgacc gagctgttcc
     1861 agaccgtgcc gaccttcctg ctgattatcg tcatcgtggc cattggccag ccttcggcga
     1921 ccgtgatcgc actggcgatc ggcgtatcct cctggcccac cgtggcccgc ctcgtgcgcg
     1981 cgcagttccg ttccctgcga gaggcggagt tcatcgctgc ctcccgctct ctcggctatg
     2041 gcgcgccgcg gatcattttt gccgaaattc tgcccaacgc catggcgccg atcatcgtta
     2101 ccgcctcggt gatggtggca aatgccatcc tgaccgaagc tggtttgtcc ttcctgaaca
     2161 tgggggatcc caacctcatc agctggggca gcatgatcgg cgacgggcgg ccgttgctgc
     2221 gcaccgcctg gttcctctgc gcgctgcccg gcggagccat cgccgtaact gtgctggccc
     2281 tcaacctggt tggcgacggg ctgaacgacc tgctcaatcc ccggtctggc ctcctctgat
     2341 ggcaccggtg ctggacgtgc gggatctcgc tgtcggcttc cctggccatg tcgtggtgca
     2401 cggggtcagt tttcacattg atcctggcga gaccctggct ctggtgggag aaagcggttg
     2461 cggcaagtcg gtcaccgctt tcgcgttgat gcgtctgttg ccatccaccg cgcgtatcct
     2521 gcggggcgag gtctggtttg acggcaccga tctggtcacc gcgtccgtcc agaaaatgcg
     2581 ggacgttcgc ggcaagcaga tctcgctgat ccagcaggag ccgatgacct cgctgaaccc
     2641 ggtgctgacc gtcggcgcgc aaatcgccga ggtcatccgg cgacatgagg cgctgtcgcg
     2701 tgccgccacc cggggccggg tcgaggaact gctcgatatg gtcggcattc cggagccgca
     2761 gcggcgcgcc gacgaattcc cgcataactt ttccggcggc atgcggcagc gcgtgatgat
     2821 cgccatggca gtcgcatgcc ggccgcggct gatcattgcc gacgagccga cgaccgcgct
     2881 ggatgtaacg atccaggcgc aggtgctgga tttgctggac gggctgcgcc ggcaactcgg
     2941 catggccgtg ctcctgatca cgcacgatct cggcgtcgtt gcgcagtggg cagatcggac
     3001 ttctgtcatg tatgccgggc gcatcgtcga acagacactg gtgcggccgt tctttcgcca
     3061 cccgcgtcac ccgtacgccc gcggcctgtt gggcgcctcg gtgaacgagg cagatagtcc
     3121 ggccggcggc gcggacggct ggcattacac cacgcggcga ctgaacgaga tcgccggttc
     3181 ggttgcctcg gcagcgggcg agccaggatg ttcgtt
//
LOCUS       DATAVD010001849         3227 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2036697, whole genome shotgun sequence.
ACCESSION   DATAVD010001849 DATAVD010000000
VERSION     DATAVD010001849.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3227
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2036697"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..281
                     /locus_tag="VHX39_35250"
     CDS             <1..281
                     /locus_tag="VHX39_35250"
                     /inference="COORDINATES: protein motif:HMM:NF016045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="low affinity iron permease family protein"
                     /protein_id="HEX3996459.1"
                     /translation="HPAAFVIVLCYVLAWLAFSPSSLDWHAIATVATWFMTLIIQRAE
                     HRDTQAIHAKLDELLRSDAKARPELSLLDQQEPEDIEKHRSQERRELR"
     gene            complement(302..490)
                     /locus_tag="VHX39_35255"
     CDS             complement(302..490)
                     /locus_tag="VHX39_35255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996460.1"
                     /translation="MRFSLLLPAALLALSGCVSVTRAPGPATTTVVTPAPVVAPAPTY
                     AAPVATDTTTTTTKRWGD"
     gene            728..1189
                     /locus_tag="VHX39_35260"
     CDS             728..1189
                     /locus_tag="VHX39_35260"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX3996461.1"
                     /translation="MKLSLTSGALMLAAALAVAPAMAQTAAATHSTNVAPATGRTGDV
                     TNTNPNERNPVMTQMGDARASKVIGSSVYNDHDEKVGSIDDLLIGKDGAMKAVLSVGG
                     FLGMGTKYVEVPYSDLTFGNTQRDSDNRVVLKGATKESLKTQPAYNYYSKS"
     gene            1454..2308
                     /locus_tag="VHX39_35265"
     CDS             1454..2308
                     /locus_tag="VHX39_35265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996462.1"
                     /translation="MLTSRAPDPGHSFEAPGIPTEASVSAISWQAILGGAAAAASISA
                     VLVLLGLGLGFAAISPWPNAGATAATFSIIGGIWLIVVQWISSGIGGFVTGRLRTKWV
                     NVHTHEVFFRDTAHGFLTWAVAALLGALILASAASSAVGTATRATGTAAAGAAQAATR
                     AYDADMLYRGEKPELATSDQQTEMETTRILARGVENGGISDGDKAYLVDQVAARTGLS
                     HDDAQKRVDDVVAQEKAAETKAREAADTARKSASAVSIFTALSMLIGAFIASAAAAYG
                     GSLRDEHP"
     gene            2404..2970
                     /locus_tag="VHX39_35270"
     CDS             2404..2970
                     /locus_tag="VHX39_35270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003617933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF892 family protein"
                     /protein_id="HEX3996463.1"
                     /translation="MSNETKAEKPFVVDMMERRNRARDHMMQGAITPSYNGNVQTACA
                     LLNEALATELICVLRYQRHYFTVQGIHSASLKAEFLQHRDEERVHADRLAERIVQLGG
                     APNFSPEGLMSRSHTEYDERDNIIEMLTEDLVAERIAIDSYREMATWFAPFDSTTRRI
                     LEEIQAEEEEHADDLAELLRNLTPEAAT"
BASE COUNT          709 a          922 c          970 g          626 t
ORIGIN      
        1 cgcatccggc ggcattcgtc attgtacttt gctatgtcct ggcgtggctt gcattcagtc
       61 cttcgagtct ggactggcac gcgatagcga ctgtcgcaac gtggtttatg acgctcatca
      121 tccagcgcgc cgaacatcgt gatacgcagg ccatccatgc gaagcttgat gaattgctgc
      181 gctccgatgc gaaggcccgt ccggagctat cgctactcga tcagcaggaa ccggaggaca
      241 tcgaaaagca ccggtcacag gaacgtcgcg agttgcgata acccggcatg gccgttggcg
      301 attagtcgcc ccaccgtttc gtcgtggtcg tggtggtatc cgttgcaacg ggagcggcat
      361 aggtcggtgc gggagcgacg acaggtgcgg gagtgacgac cgttgtggtc gccggcccgg
      421 gtgcgcgcgt gaccgagacg caacccgaga gagcaagcaa agctgccggc agcaacaagg
      481 agaatcgcat ggaaccattc cttatgtaat gacagtccag taagagaacg tccacactgg
      541 agcgaaggtt ccaggcccac gcgatcagga aaaagaagcc acgctgcgcg ggggagccac
      601 ggaattaccc atcggctttt cccatcggcg atcaactgag ttcatttcgg ctggaacccc
      661 caaccgataa ccgagttggt ttgtgcgacc catcgatgaa acgatggcat taaccaagga
      721 ggactgaatg aaactaagcc tgacatctgg cgcgctaatg ttggctgccg ccctcgcggt
      781 ggcgccggcg atggcacaaa ccgccgccgc tacccatagc acgaacgtgg ccccggcaac
      841 tggccggacc ggcgatgtta ccaacacgaa cccgaacgag cgtaaccccg tgatgacgca
      901 aatgggtgat gcccgtgcaa gcaaggtcat cggctcctca gtctacaacg accatgacga
      961 gaaagtcggt tcgatcgacg atcttttgat tggcaaggac ggcgcgatga aggccgtcct
     1021 gtcggtcggc gggttcctcg ggatgggcac aaagtatgtc gaggttccct attccgattt
     1081 gaccttcggc aacacgcagc gtgacagcga caatcgcgtg gtactgaaag gtgcaacgaa
     1141 ggagtcgttg aagacgcagc cggcctacaa ctattacagc aaaagctaga cattcaacca
     1201 cgggccgccg gggaaaaccc ggcggttcgg ctatttgggg catgccctac cgcggctcgg
     1261 tccgggcgca aaactctgac acaattgtaa aagatccaaa acgtattaag ctgcggaacc
     1321 ggaacagcta tcgcccgttg tatgtcagcg ttgaaacttt tgcaggaggc agaaatggga
     1381 cgtggcattt tgttgtggct tctgggcgtg ccgattccag tgattatttt gctcgcgctg
     1441 atctggcact gacatgctga cctctcgggc acccgaccct ggtcactcgt ttgaggcgcc
     1501 aggcataccc accgaagcaa gtgtctcggc gatttcttgg caagccatcc tgggtggcgc
     1561 ggcagcggcg gcatcaattt ccgccgtgct tgtacttcta gggctcggtc tgggctttgc
     1621 cgcaatttcg ccttggccaa acgcaggtgc gaccgcggcc acgttctcaa tcattggcgg
     1681 catctggttg attgtcgtgc aatggatttc gtccggcatt ggcggcttcg ttaccggacg
     1741 cttgcgcacg aaatgggtca acgtccatac ccacgaggtg ttcttccgcg acaccgcgca
     1801 cggcttcctt acctgggcgg tggcggcgct gctcggcgca ctgatcctgg cttcggccgc
     1861 gtcctcggct gtcggaactg ccacacgtgc taccggtaca gccgcggctg gtgcagccca
     1921 ggccgcaacg cgagcctatg acgcagatat gctgtatcgt ggggaaaagc cggaactcgc
     1981 tacgtctgac caacaaacgg aaatggaaac gacccgcatt ctcgcgcgag gcgtcgagaa
     2041 tggcggcata tccgacggtg acaaagccta tttggtcgat caggtcgccg ctcgcacagg
     2101 cctgtcgcat gatgatgcac agaagcgcgt ggacgacgtg gtcgcacagg aaaaggcagc
     2161 tgaaaccaaa gcgcgcgagg cagcagatac ggctcggaaa tccgcatctg cggtatcgat
     2221 cttcactgcg ttgtcgatgc tgatcggggc gttcatcgcc agcgcagcgg cggcctatgg
     2281 aggtagcctg cgagacgagc atccataagc ttatcgagtt ggccgaccag acattcgaaa
     2341 tccaaagtgc gccgcccgat catcgcacgc acgtgttaac agtccgatgg aggacacagc
     2401 cctatgagca acgaaaccaa agcagagaag ccatttgtgg tggacatgat ggagcgccgc
     2461 aaccgcgcgc gcgatcacat gatgcaaggt gcgatcaccc ccagctacaa cggaaacgtg
     2521 cagacggcct gcgcgttgct gaatgaggcg ttggccaccg aactgatctg tgtactccgc
     2581 tatcaacgtc attatttcac ggtccagggc atccattccg cttcactgaa ggcagaattt
     2641 ctgcaacacc gggatgagga gcgcgtccac gccgatcggc ttgccgaacg gatcgtgcaa
     2701 ctgggcggtg cgccgaattt ctctcccgaa ggtctgatgt cgcgaagtca taccgaatac
     2761 gatgagcgcg acaacatcat tgagatgctc acggaggatc tcgtcgcgga gcggatcgcg
     2821 atcgacagct atcgcgaaat ggccacctgg ttcgctccgt ttgattcaac gacaagacgt
     2881 attctggagg agatccaggc cgaggaagaa gagcacgccg acgatctggc cgagctgttg
     2941 cgcaatctga cgccggaagc cgcgacctga tcagtcgcgc ccggccgacc cacactcata
     3001 tcaggtccct gagaatgagg cgtaattcgc actccaattc gcaaatcgtg aacggcttgg
     3061 taacaaggcg cgtgcccagg tcaagcacat cgttgtgaat gacggcgtta cggctgtcca
     3121 tctcttcggt cactcgtcag gagcgcattt ggctggtgtg ccgatgacga cggactggcg
     3181 cggcttgtat ggatgccccg ctgacgtgat caagagcgga ctgcttt
//
LOCUS       DATAVD010001850         2862 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2967343, whole genome shotgun sequence.
ACCESSION   DATAVD010001850 DATAVD010000000
VERSION     DATAVD010001850.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2862
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2967343"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..790
                     /locus_tag="VHX39_35275"
     CDS             <1..790
                     /locus_tag="VHX39_35275"
                     /inference="COORDINATES: protein motif:HMM:NF037955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3996464.1"
                     /translation="EYGWVRAAGSAAFILGTLAAGQSIGRAGLGIIVWLNAGLLAVGA
                     GFAWVIPNRVAGSTVSEGIPAGSTRTLLRLPMFGRLMVVAALIGGSHALHDGFEVIRW
                     RSAGLSPAEASVLWSLSVSAEVVVFLFLGRHLLNRLGPRRAMLLAAIAGVIRWGTAAQ
                     TAWFPVMAMVEPLHGLTFALLHLSCVTMIGRIVPTNLAATAQAFYATVAMGAASAAVT
                     LAAGPLYEHLGAAAFWVMAAMCAVALPVALGLNVPAEPGERLKK"
     gene            complement(1127..2581)
                     /locus_tag="VHX39_35280"
                     /pseudo
     CDS             complement(1127..2581)
                     /locus_tag="VHX39_35280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510130.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1380 family transposase"
BASE COUNT          510 a          870 c          973 g          509 t
ORIGIN      
        1 cgaatacggc tgggtacgcg cggccggatc agcagcgttc atcctgggca cgcttgccgc
       61 cgggcagagc atcggccgcg ctgggctcgg cattatcgtc tggctcaatg cggggttact
      121 ggcagtgggc gccggttttg cttgggtgat cccaaaccgc gtcgccggca gcacagtatc
      181 cgaaggtatt ccggcgggat cgacgcggac gttgctccgg ctgccgatgt tcggccggct
      241 catggttgtc gctgcactaa tcggtggcag tcatgcgctg catgacgggt tcgaagtgat
      301 ccgttggcgt tccgctgggt tgtcgcccgc ggaggcgagc gtgctgtggt cactgtcggt
      361 cagcgccgag gttgtggtct tcttgttctt ggggcgccac ttgttaaatc ggcttggtcc
      421 acggcgagcg atgctgctgg ccgcgattgc cggcgtgatc cgctggggga ctgccgcgca
      481 gacggcatgg tttccggtca tggccatggt cgaaccgctg cacgggttga cgtttgcgct
      541 gctgcacctg tcgtgcgtga ccatgatcgg ccggatcgtc cctacgaacc tggccgcaac
      601 ggctcaggca ttctacgcga ccgtcgcgat gggagcggca tcggcggcgg tgacattggc
      661 tgccgggccg ctgtacgagc atctgggagc agcggcattt tgggtgatgg cggctatgtg
      721 cgccgtagcg ctgccggtcg cgctgggcct caacgttccg gcagagccgg gtgaacggtt
      781 gaagaagtga agaaggaccc gcgcatgccc atcaagacca gagccgtacc cggccgaaat
      841 ccgcgacggc ggacgaccga ccaacgaccg ccagtgaacc agtgaactgc aatcccgata
      901 ccggaatgga ggcggacgct cacgccctgc gatacggcct gcgatcaccg ttccgatgta
      961 acgtccttgc tgcttcgcgg ccgtcgcgag ccgagtagcg gcctgccgtc aggcccggat
     1021 ctggtcatgg cgtcgctaat ggcaaagacc ttggggtgac cgggctcagg cgatttcggg
     1081 gcacacgccc cgtcagtcgc gggccggcgg cctgtaggca gcgctccaga ctggcaaaca
     1141 gtgcggcgtc cggacaggcg gcggcgaagg cgatgcgcac gcgtgaagcg gtctcgatca
     1201 cccgtgcggc gaccttcagc aaccgcatcg gcagcctcgt gaactcggcg cgcgcgagcg
     1261 gttgcggctg ggggatcgcg tcacgcagct tcagcatcag ccagtaagcc ccggtatgca
     1321 gcaccaggcg cacctggttg gcgcgcggat cgcggcaact ggtgcgatcc gaggcaagct
     1381 gggcgaggct ggccaaggtt ccgacggcgc agccgttgga atagccagac gagggcttgt
     1441 gcagcttgat caggttctcc gcctgaccac gggcgcaata cagcgtggcg tagagtcatt
     1501 cggcgctgct ggtgctgagg ttggtgacga cgtagcggat gtccagccct ttcgtcgtgg
     1561 cctcgatccg cgcaacaacg cggcgttcgc acgaccagga tttggcgccg tagcgggtct
     1621 cggtatagcg gcgcacccca taggtttcgt tgatggcacg gttgaccctg accgcatcgg
     1681 ccaccggttc aaccaggctg tccagcacgc tgttgccggg caaacccagg atataattga
     1741 ccttgttcgc ctcgcaccag gccatcacct cggggcgtcc gtaatggcca tcaccgcgga
     1801 tggtcagccg cgtggccggc caatgacggc ggatgcgatg caccagacgg cgcagatggc
     1861 gactgatctc cgccccggac ggcgttttgc cggggcgcag cagcaccgct accgggcggg
     1921 ctgttgcggt gtcgtaaaca gggatcggct ggaagcagcg ctcatcgtaa tgggcattga
     1981 acagcgacaa ctgctgatgg ccatgcacca catccacggt gtcatcgatg tccagcgtga
     2041 ccgcgcgcgg cggctgcgga tagctggcac aataaagatc gaccatggcg taggtcatgc
     2101 ggatcacgct gcgcagatcg ggggtgttct cgcagttcgc gtttcgttgg cgcgagccaa
     2161 ctcgccgaaa cgcggtccag cgcgacaggg tcggctgcga gcacagatcc gcaccgctgt
     2221 cgggcagccg cccgcaggcc agcttgaagc cgggatcggt gcgcagatga tcaaggtcat
     2281 cggcgtcctc ataaccacac gagatcacgc gtttcgttca cggcacgtga acgtgccgaa
     2341 acgcggagat ggccagcatg cgggaacgca ggatgtcctc gacgctgtgg gtcaccagca
     2401 ccggattgcg gcggtcgggg atcagcgagg ccaatattcg ggcgatgccc aggccgcgtt
     2461 ccaccgcggc cagcaacatc acgccgccgt cggaggtgag gcgcccgccg tcaaatgccg
     2521 caacgacttt cttgcgtccg acggctggga aatcgaacga aagaagggta tcgtcggtca
     2581 tggcgggtgt tgctcgcgga ttgtgggatc ggtttggtct cgacacccaa ttccgtagat
     2641 gcaatcagcg atttaagcga cacccgccag cgaatccctg ctatgcggtg aataagatgg
     2701 gctaacccct ttcgccgcgg ccctttacca acagcaggca caatcgaaca ggagccgtgg
     2761 cgcgaaacct gacagaacct attcaagaag gaagacgccc cgatggtcgt cgttccccat
     2821 gccatggcta accggaacgt ggccaagaag atcgcctggc ag
//
LOCUS       DATAVD010001851         2666 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2036727, whole genome shotgun sequence.
ACCESSION   DATAVD010001851 DATAVD010000000
VERSION     DATAVD010001851.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2666
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2036727"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..524
                     /gene="dapF"
                     /locus_tag="VHX39_35285"
     CDS             <1..524
                     /gene="dapF"
                     /locus_tag="VHX39_35285"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008613759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEX3996465.1"
                     /translation="ANGHVSVDMGLVRLNWYDIPLARSMDTLDLDLAIGPVSHPAAAN
                     VGNPHATFFVPDIACVPIDEIGPQIEHSALFPERANIGFAQVLGPEHIRLRVWERGAG
                     VTLACGSGACAALVNAARRGLTGRTATIVADGGELVITWRDDNHVLMTGPVATSFTGE
                     IDLTTLPLRVRSC"
     gene            complement(493..1329)
                     /locus_tag="VHX39_35290"
     CDS             complement(493..1329)
                     /locus_tag="VHX39_35290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007092033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEX3996466.1"
                     /translation="MTSIIATTSAVRPVGDLLREWRQRRRMSQLDLACEAEISTKHLS
                     FLETGRSTPSRDMVLHLAEQLDVPLRARNALLNAAGYAPVYPERQLDDPAMAAARQAI
                     DLVLAGHEPHPALAVDRHWCLAAANRAVTPLLTGVDPALLRPPVNVLRVGLHPAGLAP
                     RTVNLAEWRLHLLAGLRQQIEVSGDPVLVDLLAELREYDIPASAPPRIGSVDRAAVAV
                     PFRLATDHGVLSFLSTITVFGTPVDITLSELALECFYPADQATAAAMRRLVSTTEPVA
                     AK"
     gene            1450..1815
                     /locus_tag="VHX39_35295"
     CDS             1450..1815
                     /locus_tag="VHX39_35295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEX3996467.1"
                     /translation="MNDITDVIGRYIAAWNETNQERRRTLIAHTFAEAASYVDPMMEG
                     HGHAEIDAMIGGVQERFPGLRFRQAGTVDSHHASVRFSWELAPEAGEPVAKGTDFASL
                     AEDGRLRSVTGFLDAVTSQ"
     gene            1834..>2666
                     /locus_tag="VHX39_35300"
     CDS             1834..>2666
                     /locus_tag="VHX39_35300"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3996468.1"
                     /translation="MTAFSPRQTLVPTPVTPIDHAYQGPQIDPRRYLCLTIVVAAQFM
                     FVVDAFIVNVAIPSIRADLTMSEAGIEAVVALYQIAFATLVIIGGRLGDLRGRRNVFL
                     IGLLGFTAASICCGLAGSGAELIAARLAQGGAAALMSPQVLATIHTLFPDEDRKRAFA
                     VFGISLGLGGAAGVMLGGWLLALNLFALGWRLIFFVNGPIGVAIAFAALRLLPVMSGR
                     HEQQLDLTGAMLLFLGLLGVVSPILCGRELHWAWWLGVIEAGGVTTMALFLAWERHTE
                     R"
BASE COUNT          486 a          843 c          825 g          512 t
ORIGIN      
        1 tcgccaatgg ccacgtctcc gtagacatgg gcctggttcg gctgaactgg tacgatatcc
       61 ccctcgcccg ctcgatggac acgctggatc tggacctggc cattggccca gtgtcccacc
      121 ctgccgctgc caacgtgggt aatccgcacg caaccttctt tgtcccggac atcgcctgcg
      181 ttccgattga cgaaatcggg ccgcagattg agcacagcgc tttgttcccc gagcgggcca
      241 atatcggctt cgcccaggtg ctaggacctg aacacatcag actgcgcgtt tgggagcggg
      301 gcgccggtgt gaccctcgct tgcggttccg gtgcgtgcgc ggcgctggtg aacgcggccc
      361 gtcgcgggct gaccggccgc accgcaacca tcgtggccga tggcggcgaa ctggtcatca
      421 cctggcgcga cgacaatcac gttctcatga ctggcccggt cgcaacctca ttcaccggcg
      481 aaatcgatct tactactttg ccgctacggg ttcggtcgtg ctgacaaggc gccgcattgc
      541 cgcggctgtc gcctggtcgg ccggatagaa acactccagc gccagttcgg acaacgtgat
      601 atcgaccggc gtgccgaaca ccgtgatggt gctgaggaac gacaacaccc cgtggtccgt
      661 ggccagccgg aacggcactg ccacagcggc tcggtcaacg ctaccgatac gcggtggggc
      721 gctggcagga atgtcgtatt ctcgcagttc agccaacaaa tcgaccaaaa cagggtcacc
      781 ggaaacctcg atctgctggc gcaggcccgc gagcagatgt agccgccact cggcaagatt
      841 gaccgtccgc ggcgccaggc cggccggatg cagacccacc cgcagcacgt tcaccggcgg
      901 gcgcaacaga gcaggatcca ctccggtcaa aagcggtgtc acggcacgat tggcggcagc
      961 caggcaccaa tgacggtcca cggccaacgc gggatgcggc tcatggcccg ccaggacgag
     1021 gtcaatcgcc tgcctcgcgg cggccatcgc cgggtcatcg agctgccgtt ccggataaac
     1081 cggcgcataa cccgcagcat tcagcaaggc gttccgggca cgtagcggga catccaactg
     1141 ctccgccaaa tgcagcacca tgtcccgact gggcgtcgat cggccggttt ccagaaaact
     1201 cagatgcttg gtggaaatct ccgcctcgca agcgaggtcg agctgactca tccgccgccg
     1261 ctgacgccac tcgcgcagca aatcaccaac cggacggacc gcagacgtcg tggcaatgat
     1321 cgaagtcatg ccggacgtta cctcggccaa aaaatcattg ccattacctg ggacttaatt
     1381 ggccccggtc gtcgcatgtg agcctctgcc gccgtgcatc acgagatgca cagcaattgg
     1441 aggtagacca tgaacgacat caccgacgtg atcgggcgct atatcgccgc ctggaacgaa
     1501 accaaccagg aacggcgacg cacgctgatc gcccacacct ttgcggaggc tgcgtcttac
     1561 gtcgacccga tgatggaagg ccatggccac gcagagatcg acgccatgat cggcggcgtt
     1621 caggagcgct ttccaggcct gcgtttccgc caggccggca cagtggacag ccatcatgcg
     1681 agcgtccgct tctcctggga actggcacca gaggctggag aacccgtcgc caaaggcacc
     1741 gatttcgcct cgcttgccga ggatggacga ttgcggtcgg ttaccggctt tctcgatgcc
     1801 gtaacgtctc agtaatggca ggaggcaatc acgatgaccg cattttctcc acgccaaacg
     1861 cttgtaccga ccccggtaac gccgatcgat cacgcgtacc agggaccgca gatcgaccct
     1921 cgtcgttatc tgtgcctcac catcgtagtg gcggcacaat tcatgtttgt tgtcgatgcg
     1981 ttcatcgtga acgtggccat tccctcgatc cgcgccgacc tgaccatgtc cgaggcgggg
     2041 atcgaggcgg tggtcgcgct gtatcaaatc gcttttgcaa ctctggtgat tatcggcggc
     2101 cgtttgggcg acctgcgcgg tcgccgaaac gtttttttga tcgggctttt gggctttacc
     2161 gctgcgtcaa tctgttgcgg gcttgcgggg tcgggcgccg aactgatcgc cgcacggctg
     2221 gcccagggag gcgcggcggc actgatgtca ccgcaggtgc tcgcgaccat ccatacgctg
     2281 tttccggacg aggaccgcaa gcgagcattc gccgtgttcg ggatttcgct cggccttggt
     2341 ggcgcggccg gggtgatgct tggcgggtgg ctgcttgctt taaatctgtt tgcgctcggt
     2401 tggcgtttga tctttttcgt caacggccca atcggcgtgg caatcgcgtt cgcggccttg
     2461 cgcctgctgc ccgtcatgtc gggccgtcac gaacaacagc tggatttgac tggcgcaatg
     2521 ctgctgttcc ttggactgct tggcgtggtc tcgcccatct tatgcggccg ggaactgcat
     2581 tgggcgtggt ggcttggggt gattgaggcc ggaggggtaa cgaccatggc gctgttcctg
     2641 gcatgggagc gtcacacaga acgcaa
//
LOCUS       DATAVD010001852         1614 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_922428, whole genome shotgun sequence.
ACCESSION   DATAVD010001852 DATAVD010000000
VERSION     DATAVD010001852.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_922428"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..683
                     /locus_tag="VHX39_35305"
     CDS             <1..683
                     /locus_tag="VHX39_35305"
                     /inference="COORDINATES: protein motif:HMM:NF013355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase-like protein"
                     /protein_id="HEX3996469.1"
                     /translation="ASLNGSTRAGWIDYARLFEEAGAAAIELNLYYIPTDLFESGREV
                     EARYTDIVRAVYRSIAIPVAVKLTPYFSSPGELAMALVDEGAAGLVLFNRVLEPDIDL
                     SRMRLVDTLTLSTPSEMRQPMLWVAILSGRTTASLAASGGVATVDDVVKYLLAGADVV
                     MTASALLRHDIEYMATLVNGLRRWMDERDIASLDGIRGMMSWRQGVAANLYSRANYLR
                     ILEGYAPP"
     gene            661..>1614
                     /locus_tag="VHX39_35310"
     CDS             661..>1614
                     /locus_tag="VHX39_35310"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEX3996470.1"
                     /translation="MKVTHRLDGDWVASARAPRHGVAQIAASVPVMIQLSDKGNDYIQ
                     RVRDLGPMIDAAADTIDATGDLPAPLFAALRARGLFRLVQPAEYGGAELDPPSLVQVI
                     EAVAQHDASTAWCLGQTNICAMTSAWLEPAVVKDIFGPENGILAWGPGPGEARVVAGG
                     FEVSGKFDFASGSRLASFLGAHVPVIEADGARRLGPNGKPMTYTMFFPRSAAEVRDTW
                     QVMGLRGTGSDSYSLTNLFVPEAYSLPRYTARKPRVSGKLYIFTPSTLYASSFAGIAL
                     GIARAVMDAFVKDVKDTTPRGASRTRGENHVIQSQVAQNEAR"
BASE COUNT          298 a          466 c          524 g          326 t
ORIGIN      
        1 ttgcaagtct gaacggttcc acgcgcgccg gctggatcga ctacgcgcgg ttgttcgagg
       61 aggccggtgc cgcggccatc gaactcaatc tgtactacat cccgaccgat cttttcgagt
      121 ccggccgtga ggtcgaagcc agatacactg atatcgttcg cgcggtgtac cggtcgatcg
      181 caataccggt tgcggtcaag ctcacgccct atttcagctc acccggcgag ttggccatgg
      241 ctcttgtcga cgaaggtgcc gccggactgg tgttgttcaa ccgcgtgctg gaacccgaca
      301 tcgatctctc gcggatgcga ctggtcgaca cgttgacgct cagcactccc agtgagatgc
      361 gccagccgat gctttgggtt gccatccttt ctgggcggac cacggcgtcg ctggcggcgt
      421 ccggcggtgt tgcaacggtc gacgacgtgg tgaaatacct gctggccggc gcagacgttg
      481 taatgacggc atccgcgtta ttgcggcacg atatcgaata tatggcgacg ttggttaacg
      541 ggttgcggcg gtggatggat gaacgcgaca tcgcctcgct cgacggcatt cgcggcatga
      601 tgagctggcg gcaaggcgtt gccgccaacc tttactcgag ggcgaattat ctgcggattc
      661 ttgaaggtta cgcaccgcct tgatggcgac tgggttgcct ctgcccgcgc gccgcgacat
      721 ggtgtggcgc aaattgccgc gagcgtgccc gtcatgatcc agttgagcga taagggaaac
      781 gattatatcc aacgagtccg tgacctcggt ccgatgatcg atgcggcggc cgatacgatc
      841 gatgcgacgg gcgatttgcc ggcgccgctg tttgccgcgt tgcgcgcgcg tggcttgttc
      901 cgcctggtgc agccggctga atatggcggt gcagaactgg atcctccgtc attggtgcag
      961 gtgatcgagg ctgtcgcaca gcatgatgcc agcacggcat ggtgcctggg tcagaccaac
     1021 atttgcgcga tgacctcggc ctggctcgaa cccgcagtgg taaaggacat ctttggaccg
     1081 gagaatggca tcctcgcgtg gggaccaggc ccaggagagg cgcgggttgt cgccggcggg
     1141 tttgaagtga gtggtaagtt cgatttcgcg agcggcagcc ggctcgccag ttttctgggc
     1201 gcacatgtgc cggtgattga agcagatggc gcaagacgac tcgggcccaa cggcaagccg
     1261 atgacctata cgatgttttt ccccaggagc gcggcggagg tccgcgatac ctggcaggtg
     1321 atggggctgc gcggcaccgg cagcgacagc tactcgctga ccaatctgtt tgtcccggaa
     1381 gcgtattcac tgcccaggta caccgcgagg aagccacgcg tatccggcaa actatacatt
     1441 ttcacaccga gcacacttta cgcctcaagt ttcgccggca tcgctctcgg cattgcgcgc
     1501 gcagtcatgg atgcgttcgt caaagacgtc aaagacacga cgccgcgcgg cgccagccga
     1561 acgcgtggcg aaaaccatgt gatccagtcc caggttgcgc agaacgaggc acgg
//
LOCUS       DATAVD010001853         3868 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_734176, whole genome shotgun sequence.
ACCESSION   DATAVD010001853 DATAVD010000000
VERSION     DATAVD010001853.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3868
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_734176"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(187..1155)
                     /locus_tag="VHX39_35315"
     CDS             complement(187..1155)
                     /locus_tag="VHX39_35315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014242593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEX3996471.1"
                     /translation="MPFKYHSEHRHHIPKPRYRVTNWAEYDASLRRRGSLTVWFTDGA
                     IQAWRAEPRTTPGGQPHYSVLAITTALTLRTVFGLALRQTEGLIGSILRLLGLDLAVP
                     DHSTLSRRAKTLEMSPLRRTGTGPLHLLVDSTGLKLGGAGEWLVEKHGTSRRRSWRKL
                     HIGIDADSGEVLAVEVSGREIDDAAMADALLGQIADPIASFTADGAYDQDRVTQAIGT
                     RHPGAAIIVPPRAGGVASASAETAPTQRDRHLRTIAEHGRMVWQKASGYNLRAKVEAS
                     IGRYKRVIGDALRSRTDRTEATEVAIAAAALNRMLALGRPNYVRIV"
     gene            1395..1556
                     /locus_tag="VHX39_35320"
                     /pseudo
     CDS             1395..1556
                     /locus_tag="VHX39_35320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611723.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            1775..2116
                     /gene="tnpB"
                     /locus_tag="VHX39_35325"
     CDS             1775..2116
                     /gene="tnpB"
                     /locus_tag="VHX39_35325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008491906.1"
                     /note="TnpB, as the term is used for proteins encoded by
                     IS66 family insertion elements, is considered an accessory
                     protein, since TnpC, encoded by a neighboring gene, is a
                     DDE family transposase; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HEX3996472.1"
                     /translation="MLPAGVRVYVACGVTDMRKGFDGLAALVQTVLALDPYSGAVFLF
                     RGKRGDLLKALLWDGQGLVLYAKRLEKGRFVWPQTRSGTVTLTNAQLSMLLEGIDWRM
                     PAWTARPEVAV"
     gene            2180..3742
                     /locus_tag="VHX39_35330"
     CDS             2180..3742
                     /locus_tag="VHX39_35330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012976047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HEX3996473.1"
                     /translation="MDSAPATLEEENALLRHQLAERNAELDVARAQIEALTFNLAVLR
                     RRQFGRSSEKLDAEVEQLELRLEDLEEGQAEQSARVAQPNPPLRQSRKPAQRKPLPSH
                     LPRETVVHEPKIICTCNGCDRSKLARLGEDVTEVLEKIPARLKVIRHVRPRYACRTCE
                     AVFQAPAPELPIERGRPGPGLIANVAVSKFCDGLPLYRQSVILGREGIEIDRATLADW
                     LGHAAWWLAPLAVLIGHQVMRSPVIHTDDTTIKVLAPGHGQTRTARFWVYAVDPRAWA
                     GVGPPAAFYRYSPDRDGERPREHLAGFGGFLHADAYAGYGPLYRASGNQPPRVTHVAC
                     FAHARRKFFEVFAATKSPIAEEAVRLIARLYEVEAEITAKPIEIRLAARRTASQPLLD
                     EFKTWADRQRRRISGKTALGKAFAYTLGRWEALTCFATDGRLSIDNNLSERLLRGVAI
                     TRKNFMFVGSDRGGDRAAIFYTLIESAKLNGLDPEAYIAAVIDRMAKGRNSRALGALL
                     PWNLKLPEHKRE"
BASE COUNT          708 a         1198 c         1243 g          719 t
ORIGIN      
        1 gcgagggtgc ggtctcccgg tggatgatcc gaggcccggg cagactggtc aaggaaggtc
       61 gatgatcgat gatagacgtt aacggcatgg cgcacgtgat cctgaccgtc agccagtagt
      121 gaccgtgttg catggaggag gagcacgaag gggcacgggc gcaaggtccc caaccctatc
      181 tgttatttaa acgatacgga catagttcgg gcgtcccaac gccagcatcc ggttcagggc
      241 ggcggcagcg atggcgacct ctgtcgcctc agtccggtcg gtgcgcgatc gaagcgcatc
      301 gccgattacg cgcttgtacc ggccgatcga cgcctcgacc ttggcccgca gattgtagcc
      361 gctggctttt tgccagacca tgcggccgtg ttcggcgatc gtccgcaggt ggcggtcgcg
      421 ctgtgtcggg gcggtctcgg ctgaagcgct cgccactccg cctgcccgcg gcggtacgat
      481 gattgcggca cccggatgac gggtgccaat tgcctgggtg acccggtcct gatcataggc
      541 tccatcggcg gtaaaggacg caatgggatc ggcgatctgc ccgagcagcg cgtcggccat
      601 cgcggcatcg tcgatttccc tccccgacac ctcgacggcg aggacttcgc cgctgtctgc
      661 atcgattccg atgtgaagtt tgcgccaaga tcggcggcgg gacgtgccgt gtttttcgac
      721 cagccattcg ccggctccgc cgagcttcag ccccgtgctg tccaccagca aatgcaacgg
      781 gccggttcca gtccgccgga gcggcgacat ctccagcgtc ttcgcccgcc ggctcagggt
      841 cgaatgatcc ggcaccgcaa gatcaagccc cagcagtctg aggatcgagc cgatcagccc
      901 ttccgtttgc cgcagcgcca ggccaaacac cgtgcgcaac gtcagcgccg tggtgatggc
      961 cagcacagag taatgcggct ggccaccagg cgtggttcgc ggttccgccc gccacgcctg
     1021 gatcgccccg tcggtaaacc acacggtcaa gctgccccgc cgtcttaatg acgcgtcata
     1081 ctccgcccag ttcgtcaccc gatatcgagg cttcgggatg tgatggcggt gttcactatg
     1141 gtacttaaat ggcaaggcga ggcggctcca aacgatgaac gaacctcccc aagtgggacg
     1201 tcgcccatcc gcctgcaact acggcgtgtc cctgcaacaa agtcgcgcct gctgctggtc
     1261 tgtaagcgaa agcggagacc cacctgtcgc ggctacggcg tagtcggcga cattgcatgc
     1321 actgattgtg ctgcggggta ttccgaatgg acgagggctc atacgaggct cgtaagagcg
     1381 cttctggaga ccggatcgag gtgacggtgc gtgctgaacg gcgtcgtcgc tggagcgcgg
     1441 aggagaagct tcggattgtc cgcgaaacgc ttcgaccggg cgcggttgcg caggtcgtgg
     1501 cggatcggaa cggcatcgga accggccagc tgtacacatg gcgcaaacag atgctgactg
     1561 cggcgatcac cgggtttgcc gctgtcgaga cggtggtcga gccgcaggtg gcgccacgtc
     1621 tgacggctcc ctcagtggcc agtgatccat caccagcggt gattgcggag gtcgcgatcg
     1681 aggtcgaact tcccaacggt gcacgggtgc gtgtcggcaa cggcgccggc gcgtcgctgt
     1741 tgtgcgatgt gtttgccgct ttggatcgtc gctgatgttg ccggccgggg tgcgcgtcta
     1801 tgtcgcctgt ggcgtgacgg atatgaggaa aggctttgat ggcttggcag ccctggtgca
     1861 gaccgttctg gcacttgacc cgtatagcgg cgcggttttc ctttttcgag gaaaacgcgg
     1921 tgaccttttg aaggcattgc tatgggacgg ccagggcctg gtactgtatg ccaagcgcct
     1981 ggaaaagggc cgctttgttt ggccgcagac caggagcggc accgtgaccc tgaccaatgc
     2041 gcaactgtcg atgttgcttg aaggcatcga ttggcggatg ccggcctgga ccgcgcggcc
     2101 ggaggttgcc gtctgataaa gtggcggcgg cacatggtaa ctacttgtac cgtgccgaca
     2161 acattgctac tctgtgcggg tggatagtgc ccctgcaacg ctggaagaag agaatgccct
     2221 gctgcgccac cagttggcgg agcggaatgc ggaactggac gtcgcgcgtg cccagatcga
     2281 ggcgctgaca ttcaatctcg ccgtgctgcg gcggcggcag tttggacgat cgtcggaaaa
     2341 actcgatgcc gaggtcgagc agctcgagtt acgcctggag gatctcgagg aaggtcaggc
     2401 ggaacaaagt gcccgggtcg cacaaccaaa tccaccgttg cgccaatccc gcaagcccgc
     2461 acagcgtaag ccgctgccgt cgcatctgcc gcgcgagacc gtggtgcatg agccgaagat
     2521 catctgcacc tgcaacggtt gcgaccgttc caaacttgct cgcctcggtg aggacgtcac
     2581 cgaggtgctg gagaaaatcc cggcccgtct gaaggtgatc cgccacgtcc gcccgcgcta
     2641 tgcctgccgc acttgcgaag cggtattcca ggcgccggcg ccggagttac cgatcgagcg
     2701 tggccggcca ggcccgggcc tgatcgccaa tgtggcggtc agtaagttct gcgacggcct
     2761 gccgctgtat cggcaatcgg tgatcttggg gcgcgaaggg atcgagatcg accgcgccac
     2821 gctggccgat tggcttggcc acgccgcttg gtggctggca cctctggctg tgctgatcgg
     2881 ccatcaggtc atgcgatcac ccgtgatcca caccgacgac accacaatca aggtgctggc
     2941 accgggccac ggtcaaaccc gcacggcccg cttctgggtc tatgctgtcg acccgcgcgc
     3001 ttgggcgggg gttgggccac cggctgcgtt ctaccgctac agccctgatc gcgatggcga
     3061 gcgtccgcgt gagcatctcg ccggcttcgg cgggttcctg cacgccgatg cttatgctgg
     3121 ctatggtccc ttgtatcggg ccagcggcaa tcagccgccg cgggtgacgc acgtcgcctg
     3181 ctttgcccat gcacgtcgga aattcttcga agtgtttgca gccacgaaat cgccgatcgc
     3241 cgaggaagcg gtgcgcctta tcgccaggct ctacgaggtt gaagccgaga tcaccgccaa
     3301 gcccatcgag atacgcctcg ccgcccggcg taccgccagc cagcccttgc tcgacgaatt
     3361 caagacctgg gccgaccgac aacgtcgccg gatctccggc aagaccgcac tcgggaaagc
     3421 gttcgcatac acgctcggac gctgggaggc gctgacttgc ttcgccaccg atgggcgcct
     3481 cagcatcgac aataatttga gcgagcgcct gctcagaggt gttgccatca cgcgcaagaa
     3541 tttcatgttc gtgggcagtg accgcggcgg cgacagggca gcgatcttct acacgctgat
     3601 cgaatccgca aagctcaacg gcctcgatcc cgaagcctat atcgccgccg tcatcgatcg
     3661 aatggcaaag ggccgcaaca gcagggcgct cggcgctttg ctgccctgga accttaagct
     3721 cccagaacac aaacgagaat gactacgaaa gcaaggtggg tcagcgctaa cgcttaccag
     3781 tcaaccccaa acctaaccga ctccggggac tcgcattgtt cccggacaga cacttagagt
     3841 ctatccggga tcattgattg cctttaca
//
LOCUS       DATAVD010001854         2870 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_359892, whole genome shotgun sequence.
ACCESSION   DATAVD010001854 DATAVD010000000
VERSION     DATAVD010001854.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2870
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_359892"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..142
                     /locus_tag="VHX39_35335"
                     /pseudo
     CDS             1..142
                     /locus_tag="VHX39_35335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612142.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
     gene            complement(174..2246)
                     /locus_tag="VHX39_35340"
     CDS             complement(174..2246)
                     /locus_tag="VHX39_35340"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEX3996474.1"
                     /translation="MSKINAGHLGRTAYIYVRQSTMAQVQHNHESQRRQYGLRDRARL
                     LGWQDVTVVDDDLGRSGSGVARPGFDRLLTAVGRGEVGAVFAIEASRLARNGRDWHTL
                     LEFCAIVGTLIIDEDGIYDPRSSNDQMVLGLKGAFSVMESSAIRQRAFEAKLEKAARG
                     ELFALIAVGYVLGADGRLQKDPNERTRASVGLVFSKFRELGSVRQVTLWLRRENVCLP
                     KLTTGGPRRSVEWMLPTYSGLLSMLANPVYAGAYAYGRNGRETRLEDGRRRVRNGVRL
                     PREKWRVLLQDRHEGYIDWDEFERNQCVIADNTNRKGQAVQGAVRGGTALLPGLLRCG
                     RCGRKLKVRYRADLPANQYYCVRPIEEDSAGRVCTTIGGNPLDRAISEELLRILAPVG
                     IEAALAAIDSGQDRGRDQRRQAELALEAARYEVGLARRQYDAVDPDNRLVAGELERRW
                     NERLIIAQRQEARLAVLTEDTTGQLSTAERERLMHLGRDLPAAWNDQTSSIEIKKRIV
                     RTAIREIVVRVEDDRLHATIHWQGGDHTAIDVATKVRGRWRNPKEADTEPATVALIAA
                     LVGMMPDSSVAAVLNRLGKRTVSGLSWTARRVQLFRNDHHLLAYRHEERIARGELMLD
                     EVAKELGISKMTVIRMIHSRTLPAHQVCPGAPYVILRQDLERPDVRSAPPISPVSADL
                     RQTTMELQ"
     gene            complement(2243..2464)
                     /locus_tag="VHX39_35345"
     CDS             complement(2243..2464)
                     /locus_tag="VHX39_35345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996475.1"
                     /translation="MLDLQLIGETMMKKTRSVQRNLFDMPATLVGTRLPQSIQTAPLK
                     LLVQALLADLIAAPRPTPTVPGRMDEVKS"
     gene            complement(2439..2657)
                     /locus_tag="VHX39_35350"
     CDS             complement(2439..2657)
                     /locus_tag="VHX39_35350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996476.1"
                     /translation="MIGWNRFGDEIYLVLARPNASSFQVPAWMTQPEAADMTVRESPR
                     IDLGALRNLRRLLDATLPSSDARSSIDR"
     gene            2738..2870
                     /locus_tag="VHX39_35355"
                     /pseudo
     CDS             2738..2870
                     /locus_tag="VHX39_35355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612008.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          536 a          919 c          826 g          589 t
ORIGIN      
        1 gtttgtctac ctcaccgcgg tgatcgactg gttcacccgg cgtgtgttgg cctggcgggt
       61 gtcgatctcg atggacgttg atttctgcct ggacgccgtc gatgaggcgt tgacccggta
      121 cggtcggccg gagatcttca acaagatcgc ggcataatgc acctccttct aagttattga
      181 agttccattg tggtctggcg taaatctgcc gatactgggg atatcggtgg tgcggaacgg
      241 acgtccggcc gctccagatc ctggcggagg atgacgtagg gcgcacctgg gcagacctgg
      301 tgggcgggaa gcgtcctgct gtggatcata cgaatgaccg tcatcttact gatcccgagt
      361 tccttggcca cttcgtcgag catcaattcc ccacgagcaa tacgctcctc atgacgataa
      421 gccagaagat ggtgatcatt acggaacagt tgaacgcggc gagcggtcca gctcaacccg
      481 ctaaccgttc gtttaccgag ccggttgaga acggcagcga cactggaatc aggcatcatc
      541 ccgaccaggg cagcgatcag tgccacggtc gccggttcgg tatcggcttc tttgggattg
      601 cgccagcggc cgcgcacctt ggtggcaaca tcaatggcgg tatggtcacc gccttgccaa
      661 tggatcgtgg catgtagccg atcgtcttcg acgcgcacca cgatctcgcg gatcgcggtg
      721 cgcacgatgc gcttcttgat ttcaatcgac gaggtctgat cgttccatgc cgccggcaga
      781 tctcttccaa ggtgcatcag cctttcccgc tcggccgtgc tcaactgacc tgtcgtatcc
      841 tcggtcagaa ccgccaatcg tgcttcctgc cgttgtgcga tgattaaccg ttcattccag
      901 cgacgctcca gttctcccgc gaccagccgg ttgtcggggt cgacggcgtc gtattgtcgc
      961 cgcgccaggc ccacctcgta acgggctgct tccaacgcca gttcggcttg tcggcgctga
     1021 tcccgccccc gatcctgtcc actgtcgatc gccgccagtg ctgcctcgat ccccacaggc
     1081 gccagaattc gcaggagctc ttcgctgatg gcgcgatcaa ggggattgcc gccaatggtt
     1141 gtgcataccc ttccagcgct gtcctcttcg atcggccgga cgcaatagta ttggttagcc
     1201 ggtagatccg ctcggtagcg gactttgagc ttgcgtccac aacgaccgca tcgcagcagg
     1261 cccggcagca gcgccgtccc gccacgcacg gcaccctgaa cagcctggcc cttccggttg
     1321 gtattgtccg cgatcacgca ctgattgcgc tcgaactcat cccagtcgat atagccttca
     1381 tgccgatctt gcagcagaac gcgccacttc tcacgcggaa gccgcacgcc attgcgaaca
     1441 cgccggcggc cgtcctccag cctggtttcc cggccgtttc ggccataggc gtaggcgcct
     1501 gcatagaccg ggttcgccag catgctgaga agcccgctgt aagtcggtag catccactcc
     1561 actgaccggc gcggcccacc ggtcgtcagt ttgggcaggc agacattttc ccggcgcagc
     1621 cacaacgtca cttgtcggac actacccagt tcgcggaact tgctgaacac cagtccgacc
     1681 gaggcgcggg tccgctcgtt cggatccttc tgcaaacggc catccgcgcc cagcacgtaa
     1741 ccgaccgcga taagagcgaa caactcgccg cgtgctgcct tctccagctt ggcctcaaag
     1801 gcacgctgac gaatggccga ggattccatc acgctgaatg cccccttcaa accaagcacc
     1861 atttgatcat tgcttgatcg tggatcgtaa ataccgtctt catcgatgat caaggtgcca
     1921 acgatggcgc aaaactccag cagcgtatgc cagtcacgcc cgttgcgggc cagccgggac
     1981 gcttcgatgg cgaacaccgc ccccacctcg cctcgaccga ccgcggtcaa tagccgatcg
     2041 aagccgggac gcgccacacc actgccggaa cggccaaggt cgtcgtctac gactgtcacg
     2101 tcctgccatc caagcaatcg cgctcgatcg cgcagaccat attggcgtcg ttgactttca
     2161 tgattgtgct gaacttgcgc catggtcgat tgccgcacat agatgtaggc tgtccgaccc
     2221 aaatgaccgg cattgatctt gctcatgact tcacctcatc cattcggccg ggaaccgtcg
     2281 gcgtcggcct tggcgcggcg atgaggtcgg cgagcagggc ttgcaccagt agcttgagcg
     2341 gcgccgtctg aatgctctgg ggcaacctcg tgccaaccag tgtcgccggc atgtcgaata
     2401 gattcctctg aacgctgcgc gtctttttca tcatcgtctc accgatcaat tgaagatcga
     2461 gcatcggagg acggcagagt cgcatccaac aggcggcgaa gattacgcaa cgctccaaga
     2521 tcgatccgcg gcgattcgcg cacggtcatg tccgccgcct ccggctgcgt catccaggcg
     2581 ggaacctgga acgacgaggc gttcggccgc gccaagacga gatagatctc gtcaccaaac
     2641 cggttccatc cgatcaccgt ggcgcgtttg cccgcgtgcg ggtgatgcgg atagcaaatg
     2701 gtgatctcgg tggcccggta ctgggcagta ttccgccgtt gtgaataccg accaaggcag
     2761 ccagttcacc agcgcggcgt tcaccgggct gctgttggag aacgcgatca agatcagcat
     2821 ggacggccgt ggttcctggc gtgacaacgt gttcgtcgaa cggctgtggc
//
LOCUS       DATAVD010001855         4185 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3334510, whole genome shotgun sequence.
ACCESSION   DATAVD010001855 DATAVD010000000
VERSION     DATAVD010001855.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4185
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3334510"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..628)
                     /locus_tag="VHX39_35360"
     CDS             complement(<1..628)
                     /locus_tag="VHX39_35360"
                     /inference="COORDINATES: protein motif:HMM:NF017775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1904680 - peptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SbmA/BacA-like family transporter"
                     /protein_id="HEX3996477.1"
                     /translation="MGGVGTFLKDAWLLARPYFVESEERWVARGLLAAVIALALTSVG
                     LTVLINFWRGAFYTALGEKDWAHFIALLGFWSWNKNGFTFGFSLLGFSYVLVFIFEYY
                     LRQLLQIRWRRWMTDKYLHEWMTDRAYYKISLSGSHELGTDNPDQRISEDIRDYTSTT
                     LILTLGLISRVVTLFSFLSILWGLSAAVQFWGVSVPGSLVWIALVYAII"
     gene            complement(636..1106)
                     /locus_tag="VHX39_35365"
     CDS             complement(636..1106)
                     /locus_tag="VHX39_35365"
                     /inference="COORDINATES: protein motif:HMM:NF019032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1499 domain-containing protein"
                     /protein_id="HEX3996478.1"
                     /translation="MTALAWLLGLILPACGADGAAGLPVPTVMDVTQIERPATPNTFL
                     AGPAGMQPKPDLVVGAWHLPAPVLYEKARDLFAGQPRTYIAAAFPDQLQVHYVVRSAL
                     LNFPDLVTIQVNSVAADRSTLVIWSRSVYGRSDFGVNRERTTAWLAALQQTKER"
     gene            complement(1103..1981)
                     /locus_tag="VHX39_35370"
     CDS             complement(1103..1981)
                     /locus_tag="VHX39_35370"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-alpha-hydroxyglycine alpha-amidating
                     lyase family protein"
                     /protein_id="HEX3996479.1"
                     /translation="MSIIGEGTWRYDFQRDWAHLPRWWNFGETTPQGWPQTCVQGAVA
                     ANGDVYVLCRAAHPVLVFDADGRFISSWGEGRFSAFVHGLSIDRHGKIWIADAGQHTV
                     TRHEPDGRLLQTLGTPNVAAATFYGQPFNMPTGTAFTSDGDIFVSDGYGNRRVHRFSP
                     DGMLKHSWGEHGTGPGQFVLVHFIAADRQDRLYVCDRDNHRIQLFSPAGETLTVWTGF
                     NMPSDLAFGQEVIYVAGGDGLSIWTPDQRLVRRFEPDVAGKGSLNVHGIWIDADENIY
                     LAQFDRTVSKLTRVDV"
     gene            complement(1991..2551)
                     /locus_tag="VHX39_35375"
     CDS             complement(1991..2551)
                     /locus_tag="VHX39_35375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF924 family protein"
                     /protein_id="HEX3996480.1"
                     /translation="MTIQPSEILAFWFEGDGAAFRDKWFEADDAFDTECCCFATAIRD
                     ARAGLFDHWAFTPHGALALIVLLDQLSRNVFRGAPEAFAADSHAIEIARATVSAGFDL
                     QLTPIERMFVYLPFEHAETIEDQNESVRLYATLRDDLGEKTVDYADRHRDVILRFGRF
                     PHRNAALGRSNTPEEEVYLAQPGAGF"
     gene            complement(2548..>4185)
                     /locus_tag="VHX39_35380"
     CDS             complement(2548..>4185)
                     /locus_tag="VHX39_35380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEX3996481.1"
                     /translation="LNDVFARHGTRGTWYAHASVGCLHVRPVLNMKDPADIATLRAVA
                     EETFALVREYKGSHSGEHGDGLARSEFHAQMFGERIVRAFETVKDAFDPTGMLNPNRI
                     VHPPRMDDRTLFRYGPGYSAVTDFTPKLDWSDHPGPLGGMLGAVEMCNNNGACRAFDA
                     GVMCPSFRVTRDEQHLTRGRANTLRLALTGQLGAEAMQSEPLAEAMKLCVSCKACRRE
                     CPTGVDMAKMKIEVLAARADRHGIGRRDHLVAELPRYARFLSHLPGLMNVRNRSPMLR
                     RLMERYGGLSAGRTLPEWSHAPFRNTEAASPAGPRGAVFLLADTFNRYFEPENLRAAL
                     RVLQAAGYGVVIPASGRRAVCCGRTFLAAGMVDKARDEARRTMAALAGDMPVIGLEPS
                     CLFTLRDEFRSLLPGANADALAGRAMLLSEFLAKAKPGLAFKPLPGHAHVHGHCHQKS
                     FGAFPDALAALQRVPELTVKPIASSCCGMAGAFGYQTETQDASRAMAEASLLPAVRAA
                     AGADFIVADGTSCRHQIRDLSGREAIHSVRLLDRALP"
BASE COUNT          832 a         1342 c         1301 g          710 t
ORIGIN      
        1 cgattatggc gtaaaccaac gcaatccaga ccagtgaacc gggaaccgag acgccccaga
       61 actggacggc cgcggacagg ccccacagga tcgacagaaa actgaataac gtaacgacac
      121 gcgagatcag gccaagggtg aggatcagcg tcgttgaggt atagtcgcgg atatcttccg
      181 aaatgcgttg gtccgggttg tcggttccca gttcgtgact gccggacagg ctgattttgt
      241 aataggcgcg atcggtcatc cattcatgga ggtatttgtc ggtcatccag cggcgccagc
      301 gaatttgcag cagttgccgc aaataatact caaaaatgaa gaccagcaca tagctgaacc
      361 ccaacaagct gaagccgaag gtaaagccgt tcttgttcca gctccagaac ccgagcagcg
      421 cgatgaaatg ggcccagtcc ttctccccga gcgcggtgta aaatgcgccg cgccagaaat
      481 tgatcagtac ggtaaggccg accgaagtca gcgccagagc gatcaccgcc gcaagcaggc
      541 cgcgcgccac ccaacgttcc tctgactcga caaaatacgg ccgcgcaagg agccatgcgt
      601 ctttcaggaa tgtaccaacg ccacccatga tctgatcatc tctctttggt ttgttgcagt
      661 gccgcgagcc aggccgtcgt tcgctcccgg tttacgccga aatcgcttcg tccgtagacg
      721 ctgcgcgacc agatcaccaa agtgcttcgg tcggcggcca cagaattgac ctggatcgtc
      781 acgaggtccg ggaaattcag caacgcgctg cgcacgacat agtgcacctg cagttggtcg
      841 ggaaacgccg cagcgatata ggtccgcggc tgaccggcga acagatcgcg cgctttttcg
      901 tacaacaccg gcgccggcag gtgccatgcc ccgaccacca gatcgggctt cggctgcatg
      961 ccggccggtc ccgccagaaa cgtgttcggc gttgccggac gttcgatctg ggtcacatcc
     1021 atcactgtcg gcacgggcag gccggcagcg ccgtcggccc cacaggcggg caggatcagg
     1081 ccgagcagcc acgccagagc cgtcaaacat cgacccttgt caatttgctc accgtgcgat
     1141 cgaattgagc aagatagatg ttttcgtctg cgtcgatcca gatgccatga acgttcaacg
     1201 atcccttgcc tgccacgtcc ggttcgaatc gcctgaccag gcgctgatcc ggggtccaga
     1261 tcgacagccc atcgccgccc gcgacataga tcacttcctg cccgaacgcg aggtcgctcg
     1321 gcatgttaaa tccagtccac actgtcaacg tctcgcccgc cggggagaac agttggatcc
     1381 ggtgattgtc ccggtcgcac acgtaaagcc ggtcctgccg gtcggcagcg atgaaatgca
     1441 ccaggacaaa ctgtccgggc ccggtgccgt gctctcccca ggagtgtttc aacatcccat
     1501 ccggactgaa acgatgcacc cgccggttgc catagccgtc ggagacgaag atatcgccgt
     1561 ccgaggtgaa cgcggtcccg gtcggcatat tgaacggctg gccatagaac gttgcggctg
     1621 ccacgttggg cgtgccaagc gtctgcaaca acctgccgtc cggttcgtgc cgggtgaccg
     1681 tgtgctggcc ggcgtcagcg atccagatct tgccgtgccg gtcgatcgac agtccgtgca
     1741 cgaatgcgga aaacctgccc tcgccccagg acgagatgaa cctgccatcg gcgtcgaaca
     1801 ccagcaccgg atgggctgcg cggcacagca cataaacgtc gccatttgct gccacggcgc
     1861 cctgcacgca ggtttgcggc cagccctgcg gcgtggtttc gccgaaattc caccagcgcg
     1921 gcaggtgcgc ccaatcgcgc tggaagtcgt accgccacgt cccttcgcca atgatggaca
     1981 tgttgctccc ctaaaacccg gcccccggtt gtgcgaggta gacttcttcc tccggcgtgt
     2041 tgctgcggcc gagcgcggcg ttgcgatgcg gaaagcggcc gaaccggagg atcacgtcgc
     2101 gatggcgatc cgcgtaatcg acggttttct cacccaggtc gtcgcgcaag gttgcgtata
     2161 gccggaccga ttcattctgg tcctcaatag tctcggcgtg ttcgaacggc aaatagacga
     2221 acatgcgttc gatcggggtg agctgaaggt cgaacccggc cgagacggtg gcgcgagcga
     2281 tctcgatggc atgggaatcg gccgcgaatg cctcgggcgc gccgcggaag acgttacgcg
     2341 acagttgatc aagtaaaacg atcaatgcca aagcaccgtg cggagtgaaa gcccaatgat
     2401 cgaagaggcc ggcgcgggcg tcgcgaatgg cggtggcgaa gcagcaacat tcggtgtcga
     2461 acgcgtcgtc cgcctcgaac catttgtcgc ggaatgcggc gccgtcgcct tcgaaccaaa
     2521 aggcgaggat ttcggatggc tgtatggtca cggcaatgcc cgatccaaca gccggaccga
     2581 gtggatcgcc tcgcgtccgg acagatcgcg gatctgatgc cggcaggacg tgccgtcggc
     2641 cacgatgaaa tcggctccgg ccgcggcccg caccgccggc agcaacgagg cctcggccat
     2701 cgcgcgagag gcatcctggg tttccgtctg atagccgaac gctccggcca tcccgcagca
     2761 ggatgacgcg atcggtttga cggtcagttc cggcacgcgc tgcaacgcgg ccagagcatc
     2821 ggggaacgcg ccaaacgatt tctgatgaca atgaccgtgc acatgggcgt gaccagggag
     2881 cggtttgaac gcgaggccgg gtttggcttt ggcgaggaac tcagacagca acatcgccct
     2941 tccggccagc gcatcggcat tcgcgccggg cagcaacgaa cggaattcat cacgcagagt
     3001 gaacagacag gatggctcca ggccgatcac cggcatgtca cccgccagcg cggccatggt
     3061 gcgccgggct tcgtcgcgcg ctttgtccac catgccggcg gccaggaagg tccggccgca
     3121 gcacaccgcg cgccggccgc tcgccgggat caccacgccg tagccggccg cctgcagtac
     3181 ccgcagcgcg gcgcggaggt tctccggttc gaaataccgg ttgaacgtat cggccagcag
     3241 gaacacggcg ccgcgcggac cggcaggcga ggccgcctcg gtattgcgga acggcgcgtg
     3301 gctccattcc ggcaaggtcc ggccggcgga cagaccacca taccgttcca tcagccgtcg
     3361 cagcatcggc gaccgattgc gcacgttcat caaacccggc aggtgcgaca aaaaccgcgc
     3421 gtagcgaggc agctctgcga caagatggtc ccgccggcca atgccgtgcc gatcggcgcg
     3481 tgccgccagc acctcgatct tcatcttcgc catgtcgacg ccggtcgggc attccctgcg
     3541 gcacgccttg cacgaaacgc ataatttcat ggcctcggca agcggctcgg actgcatcgc
     3601 ctcggcgcca agctggccgg tcagtgccag ccgcagcgta ttggcacggc ctcgggtcag
     3661 atgctgctcg tcgcgggtga cccggaaact cgggcacatc acgccggcat cgaaggcacg
     3721 gcaggcaccg ttgttgttgc acatctcgac cgcgccgagc atgccgccga gcgggccggg
     3781 atggtccgac caatcgagct tcggcgtgaa atcggtgacc gcagaataac cgggcccgta
     3841 acggaacaag gttctgtcat ccatccgcgg cgggtgcacg atccggttcg ggttcagcat
     3901 gccggtggga tcgaaggcgt ccttgacggt ttcaaacgcg cgaacgatgc gttcgccaaa
     3961 catttgcgca tggaactcgc tgcgcgccag cccatcgccg tgctcgccgc tgtgggagcc
     4021 tttgtattcg cgcaccaacg caaaggtttc ctcggcgacg gcgcgcaggg tggcgatgtc
     4081 cgcggggtct ttcatgttca gcaccgggcg cacatgcagg cagcccaccg aggcgtgcgc
     4141 gtaccaggtg cccctggtgc cgtgccgcgc gaacacgtcg ttcag
//
LOCUS       DATAVD010001856         4071 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3334543, whole genome shotgun sequence.
ACCESSION   DATAVD010001856 DATAVD010000000
VERSION     DATAVD010001856.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4071
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3334543"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..861
                     /locus_tag="VHX39_35385"
     CDS             <1..861
                     /locus_tag="VHX39_35385"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX3996482.1"
                     /translation="DATCPVCGRGERPAFRQIDNFMYYQCNVCDFIFIAGGVMARIDA
                     GEQIRSYEKAYWESELGTARERAWGPALARVAEAILYCRVPIKRFIDIGTGPGYILDS
                     LSWVLPSSSALFHGVELFPPALQYRTRHPNYKVGSLASFSQPFQCGSCIEVVEHLTPK
                     MLSGMAADLARVSAEGACYIINTGLTDYVRNEDIDYVDPLRRGHISIWSASALRIIFE
                     PHGFAVYPIPGKSWAVLVEYKYKPRAQERNITDRIWTPCQENRQILEDPQTGTLMYIL
                     GIDTARAYTG"
     gene            complement(942..2360)
                     /locus_tag="VHX39_35390"
     CDS             complement(942..2360)
                     /locus_tag="VHX39_35390"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEX3996483.1"
                     /translation="MAAYITALIDNGTLPPNGRVPSLRDIASQRRASLSTALHAYRLL
                     EDRGVIEARPRSGYVVAKTRPAALPTPSLSTPPGKPVNVAVSSVVLDLLEHAADPRLV
                     PLGCAIPSATLLAAGHLDRYLARAARVRGGEYNTYTVPKGDPRLRQEIARRALRWGQV
                     LPPEDIAITCGCTEALALALRTVARPGDTIAVESPTYFGMLQAIEALDLKVLELPTDA
                     RTGVDLPTLQRALSSGAISACLLSSSFNNPLGCTMPEDKKIAVLDLLAAHGVPLIEDD
                     IYGDIYFSKERPVPFMALDRHDNTIYCSSFSKTIAPGYRIGWVATGRRMRRLLENKFA
                     STLCGPGLPQAALADFLSSGGYDLHLRRIRRTFEDNLHQMIRTIDRAFPSGTLVSQPA
                     GGFVLWVELPAAISTRALFRRALEQGVCFAPGDVFSASDRYANCMRLSCGQIWDDRME
                     NGLLRLGMLVREAMKGQQETVI"
     gene            2498..3601
                     /locus_tag="VHX39_35395"
     CDS             2498..3601
                     /locus_tag="VHX39_35395"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEX3996484.1"
                     /translation="MAQFPINDIMTLVGPSPRFDLAESLGPDLYLRDVLGPDDVRLGY
                     GSPAGDPGLRAMIAERNGVDPDDVVVTAGGMHALFLLAFILCDRGDEAVTTAPLFPLA
                     RSALEAVGAEVRTVTLDFGRGYQPDPAAVCAALSARTKLVSFASPQNPSGVAIPPATV
                     RAVLVAMQARCPDAYLLMDETYREAVYGDDPVPPSLVGLSPKIVSVASLSKCHGAPGL
                     RIGWAITRDPALRQQLLVGKFNTVISCSAVDEALACRVLGQSQQSRRDHFAACLARTA
                     AWVERNADRVEWVRPNAGALCCVRLRPDRFYDAAVGRFYHELASHGVRVANGIWFGDE
                     ARNFRLGFGLLPLQDLDAALSAVSTALDKVSTT"
     gene            3598..>4071
                     /locus_tag="VHX39_35400"
     CDS             3598..>4071
                     /locus_tag="VHX39_35400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008942759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HEX3996485.1"
                     /translation="MTRRFHTLDVFTGQALAGNPLAVVLDAQDLDDQRMQAIAREFNL
                     SETVFVGPPTNQANRASLRIFTPGREVPFAGHPTVGTAVLLGLLDPDGGREFTLEEKI
                     GLVPCVVEARGPERGHATFTLPRLPERIGRLPDNATLALGLGLEEADIGFGGHQPA"
BASE COUNT          704 a         1251 c         1312 g          804 t
ORIGIN      
        1 gatgcaacct gcccggtgtg tggtcgtgga gagcggccgg ccttccggca gattgacaat
       61 ttcatgtatt atcaatgcaa tgtttgcgat tttatattca ttgctggcgg cgttatggca
      121 agaattgacg ccggcgagca gattcgcagc tacgagaagg cgtattggga atcggaattg
      181 ggcacagcgc gcgaaagggc gtggggaccg gccctggcca gggtcgccga ggccatctta
      241 tattgtcgag tgccgatcaa gcgattcatc gatataggaa ccggacccgg ctatattctc
      301 gattcgctaa gctgggtgtt gccaagctca agtgccctgt ttcacggcgt cgaactgttc
      361 cctccggcgt tgcaatacag aacaagacat cccaattaca aggttggctc tctggcgtct
      421 ttttctcaac cattccaatg tggctcctgc attgaagttg tcgaacacct gacccctaaa
      481 atgctgtcgg gaatggcggc cgacctcgca cgcgtgtccg cggaaggggc gtgctatatc
      541 atcaatacgg gactgacaga ctacgtacgg aacgaggata tcgattacgt ggacccgctt
      601 cgccgtggtc acatttctat ttggtccgct tccgctcttc ggatcatatt cgaacctcat
      661 ggattcgcag tctaccctat ccccgggaag tcctgggctg tcctcgtcga gtataaatac
      721 aaacctcgcg cgcaagagcg taacatcacg gatcgcatct ggacgccatg tcaggaaaat
      781 cgtcagatac tggaagatcc gcaaaccgga accctgatgt atatactggg tatagatacg
      841 gctcgggcat ataccgggtg atccatgggc tgaaccggcc gtcgatgccc gtgatgaaat
      901 gccgcacgtg gattgcttcc gaacctattc gcggcgatcg ttcagatgac ggtttcttgc
      961 tggcctttca ttgcttcccg gaccagcatg cccagccgga gcagcccgtt ttccatccgg
     1021 tcgtcccaaa tctgcccgca actcaggcgc atacagttgg cgtaacgatc gctggcggag
     1081 aacacgtcgc cgggtgcgaa gcagacccct tgctccagcg cgcggcggaa cagcgcccgt
     1141 gtcgagatgg cggccggcag ctccacccat agcacgaacc cgccggcggg ttgggacacc
     1201 agcgtgccgc tcggaaacgc gcgatcgatg gtgcggatca tctggtgcag gttgtcctca
     1261 aaggttcgcc tgatccgacg caggtggagg tcgtagccgc ctgacgacag aaaatccgcc
     1321 agggccgctt gcggcaggcc cggtccgcag agcgtcgagg cgaacttgtt ctccagcagg
     1381 cggcgcatgc ggcgtccggt cgccacccag ccgatccggt agccgggcgc gatggtcttg
     1441 gagaacgagc tgcaatagat cgtgttgtcg tgacggtcta acgccatgaa cggcaccggt
     1501 cgttccttgc tgaaatagat atcgccatag atgtcgtcct cgatcagcgg cacgccgtgt
     1561 gcggccagca ggtccaggac ggcgatcttc ttgtcctccg gcatcgtgca accgagcggg
     1621 ttgttgaagc tggaagatag caggcaggcg ctgatcgcgc cggatgacag tgcccgctgc
     1681 aatgttggca ggtcgacccc ggttcgcgcg tcggtcggca gttcaagcac cttcaggtcg
     1741 agggcctcga tcgcctgcag catcccgaaa taggtcgggg attcgaccgc gatcgtgtcc
     1801 ccgggtctgg cgacggtgcg caaggccagc gccaatgcct cggtgcagcc gcaggtgatg
     1861 gcgatgtcct cgggcggcag aacctgtccc cagcgcaggg ctcggcgggc aatttcctgc
     1921 cgcagccggg gatcgccctt ggggactgtg taggtgttgt actcgccgcc gcgcacacgc
     1981 gcggcccgag ccaggtagcg gtcgaggtga ccggccgcca atagggtggc actggggatt
     2041 gcgcagccca gcggtaccag acgagggtcg gcggcgtgct ccagcaagtc cagcacgacg
     2101 ctggatacgg cgacgttgac cggcttgccg ggtggcgtgg acagcgacgg ggttggcagc
     2161 gcggccgggc gggtcttggc gacgacgtag ccggagcggg ggcgcgcctc gatgacgccg
     2221 cgatcctcca gcaggcgata ggcgtgcagg gcggtcgaaa gactggcgcg gcgctggctg
     2281 gcgatgtccc gtaatgacgg cacccggccg ttcggcggca gcgtgccgtt gtcgatcagg
     2341 gcggtgatgt aggccgccaa ttcctcatac cgatgggctg ggtgtgctcg catggatcgt
     2401 gccctgattg tcggactcgg tccctacaac tgttataggt acaattccag ttatctgtat
     2461 ctgttatcat gtgttctgac cggctacacc gtcggggatg gcacagtttc caatcaacga
     2521 catcatgact ttggtcggtc cctcccctcg cttcgacctg gcggagagtt tggggccgga
     2581 cctgtacttg cgcgatgtgc tggggccgga cgatgtgcgc ctcggctatg gttcccccgc
     2641 gggagacccc gggctgcggg cgatgatcgc cgaacggaac ggggttgatc cggatgacgt
     2701 cgtcgtcacg gcggggggca tgcatgcgtt gttcctgctg gcgttcatcc tgtgcgaccg
     2761 gggcgatgag gcggtcacga ccgcgccgtt gtttcctctc gcccgttcgg cgctggaagc
     2821 ggtcggcgcc gaggtgcgca cggtgacgtt ggacttcggc cgtgggtacc agcccgaccc
     2881 ggccgccgtg tgcgcggcgc tgtcggcacg aacgaaactg gtcagtttcg cgtcaccaca
     2941 gaacccgtcc ggcgtggcca tcccgccggc gaccgttcgc gcggtcctcg tggcgatgca
     3001 ggcgcgatgc cccgacgctt atctgctaat ggacgagacc tatcgggaag ccgtgtatgg
     3061 cgatgatccg gttcccccca gcctggtcgg tcttagccca aaaatcgttt ccgtcgcgtc
     3121 tttgtccaaa tgccacggcg cacccggttt acgcatcgga tgggccatca cccgtgatcc
     3181 cgccctacgc cagcaattgc ttgtcgggaa attcaacacc gtgatttcct gttcggccgt
     3241 ggacgaggcg ttggcgtgtc gggttctggg gcaaagccag cagtcccggc gcgatcattt
     3301 cgcggcctgt ctggcacgca ccgccgcctg ggtcgagcgg aacgcggatc gcgtcgagtg
     3361 ggtccgtcca aatgccgggg cgctctgctg cgtgcggctg cgtccggaca ggttctacga
     3421 tgccgctgtc ggccgctttt accacgaact ggccagtcat ggcgtccgcg tcgccaacgg
     3481 catctggttc ggcgacgagg ctcggaattt ccggcttggt tttggcttgc ttcctctgca
     3541 agacctcgac gcggcgttgt ccgccgtttc aacggctctc gacaaggtat caacgacatg
     3601 acgcgccgct tccataccct cgacgtcttc accggacagg ccctcgcagg caatccgctc
     3661 gccgtcgtgc tcgatgcaca ggaccttgac gaccagcgca tgcaggcaat cgctcgggag
     3721 ttcaacctat cggaaaccgt gttcgtcggc ccgcccacga accaggccaa ccgggccagc
     3781 ctgcgcatct ttacacccgg tcgcgaggtt cccttcgccg gccatccaac cgtcggcacc
     3841 gccgtgttgc tgggcttgct tgacccggac ggcggccggg aattcacgct ggaggaaaag
     3901 atcggcctgg tgccatgcgt ggtcgaggcg cgagggcccg aacgcggaca cgccaccttc
     3961 accctgccgc gcctgcccga acgcatcggt cgcctgccgg acaatgccac cctggcgctt
     4021 gggctgggcc tggaggaagc cgatatcggc ttcggcggac accaaccggc g
//
LOCUS       DATAVD010001857         3228 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1105192, whole genome shotgun sequence.
ACCESSION   DATAVD010001857 DATAVD010000000
VERSION     DATAVD010001857.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3228
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1105192"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(127..1332)
                     /gene="metZ"
                     /locus_tag="VHX39_35405"
     CDS             complement(127..1332)
                     /gene="metZ"
                     /locus_tag="VHX39_35405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016835 - carbon-oxygen lyase activity
                     [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HEX3996486.1"
                     /translation="MTIDPSKLRPATRLVQGGVHRTAHGETAEAMFLTSGFVYDDAEQ
                     AEATFNGTAEHYQYSRFANPTLSMFEERLCLIEGAEACRATATGMAAVNAALLSHLKA
                     GDRVVASRALFGSCHWIVSTLLPKFGIEAVFVDGSDLDQWRDALRKPTHLVLLETPSN
                     PMLEIVDLPSVAALAHAAGAIVVVDNVFATPLLQQPLQMGADVVVYSCTKHIDGQGRV
                     LGGAVLGSTKWVTDVLQPFFRNTGPAMSAFNAWVLLKGLETLPLRVDAGCRSAEAIAE
                     FLAGQSGVTRVWYPTRADHPQRELAMRQMTAGGTVVTFEVAGGKAGAFRVMNAFQLIA
                     VSNNLGDSKSLVTHPATTTHMRIGEAERAKLGIADGVIRLSVGLEDVEDIKDDLGRAL
                     AAARLARAA"
     regulatory      complement(1393..1472)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00521"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00521"
     gene            1641..2648
                     /locus_tag="VHX39_35410"
     CDS             1641..2648
                     /locus_tag="VHX39_35410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007006219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-terminal binding protein"
                     /protein_id="HEX3996487.1"
                     /translation="MPTVLYAENNYPDDSVERRIFGPNVTLLVPQRPTGSIADLTDEE
                     CAQADGLMTLRFRVTEADLARFPKLRFVCRMGVGYDGIDRVACAKRQVVVLNIPDYGT
                     TEVADHAMALALTLRRGVLLHLESQRADPPARWGYVNDPLLVRSGVQTFGIVGMGRIA
                     TAVALRAKAFNFRVMFYDPYLPNGVELGLGVLRAKTLEELLRQTDTLSVHTPLTLETR
                     GMLGLRELSLLPKGAVVVNTARGPIVDIDALAQLLKSGHLAGVGLDVVPVEPPVEPVP
                     ELIRAYRAREPWTIGRLVITPHSAFYTPQAWDDIRSKGAETMAAALAGKPQNVIAPES
                     Y"
     gene            2803..>3228
                     /locus_tag="VHX39_35415"
     CDS             2803..>3228
                     /locus_tag="VHX39_35415"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3996488.1"
                     /translation="MSDRTIADPAVDAIARRCIIAGFIGFAVDFFDIYLPAMVLTPVI
                     TYFEPKGLSETTTTTIYYFTVATTLLGRPCGAIIFGHWADKIGRRLVTMVSIAGFGTL
                     TGLVALLPGYSSIGVWSLVLLLVLRFIGGVFMGGEYTSNN"
BASE COUNT          590 a          972 c         1023 g          643 t
ORIGIN      
        1 gagaacgcgg agaagtttca ttgcagggtc aggcgacgtt aattatccca cgccctccgt
       61 gtcctttgct ttctccgcgc cctccgagaa atcgcctttc ttgttgcaac acggacggtc
      121 cgagcattac gcagcccgcg ccagccttgc cgccgccagc gcacgtccca aatcgtcctt
      181 gatgtcctcc acatcctcca gccccaccga aagccggatc acgccgtcgg cgatgccgag
      241 cttcgcccgc tccgcctcgc cgatccgcat gtgcgtcgtc gtcgccggat gggtcacgag
      301 cgacttcgag tcacccagat tgttcgatac cgcaatcaac tggaacgcat tcatgacccg
      361 gaacgcaccg gccttgccgc cggcgacctc gaacgtcacg acggtgccgc ccgccgtcat
      421 ttgtcgcatc gccagttcgc gctgcgggtg gtcggcacgc gtcggatacc acacccgcgt
      481 cacaccgctt tgtccggcga ggaattcggc gatcgcctcg gccgaccggc agccggcatc
      541 gacacgtaac ggcaacgttt ccagaccctt cagcaaaacc cacgcgttga acgccgacat
      601 cgccggaccg gtattacgga agaacggctg cagcacatca gtgacccatt tcgtgctacc
      661 gagcacggcg ccgccaagca cgcgcccctg tccgtcgata tgcttggtac aggaatacac
      721 cacgacatcc gcacccattt gcagcggctg ctgcaacaat ggggtcgcga acacattgtc
      781 gacgacgacg atcgcccctg ccgcatgcgc cagagcggca accgacggca agtcgacaat
      841 ctccaacatc gggttcgacg gcgtttccag cagcaccaaa tgggtcggct tacgcagggc
      901 gtcgcgccat tggtccagat cggaaccgtc gacgaacacg gcctcgatgc cgaacttcgg
      961 cagcaaagtc gaaacgatcc aatgacacga accgaacaac gcgcgtgagg ccaccacccg
     1021 gtcgccggcc ttcagatgcg acagcagtgc cgcgttgacg gcggccattc cggtggcggt
     1081 ggcgcggcag gcttcggcgc cttctatcag gcacagccgt tcctcgaaca tcgacagtgt
     1141 cggattggcg aaccgcgaat attggtaatg ttccgcggtc ccgttaaagg tggcttcggc
     1201 ctgttcggca tcgtcataaa cgaacccgga ggtcaggaac atcgcctcgg cggtctcgcc
     1261 atgcgcggta cggtgtactc cgccttgcac gaggcgggtc gcgggacgga gtttggatgg
     1321 atcgatggtc atgtgtcggg gcctttccca cttagtttgg cccgaccgcg aagcagcttt
     1381 ccgcccgtta ttttgggcat atcgctggcc tctttagcgc gcttgtttca cctcgccgca
     1441 atccggccgg acaaatcacg agggccggcg aaccggcggg gcgggaccat agggacgacc
     1501 ccaggcgccg tcaatctgcg ttttaccccg caaaaagccc ttgaccggcc agattcgtca
     1561 ggtcgttcag ctgtcggatg gacactggat tggcggtccg atacaggggc cggcagcaat
     1621 caacagggaa tgtcgccgcc atgccaaccg tgctgtatgc cgagaacaac tatcccgatg
     1681 acagtgtgga acggcgcatc tttggcccga acgtgacgct gctggtgccg caacggccga
     1741 ccggctcgat cgccgacctg acggatgagg aatgcgccca ggcggatggg ctgatgacgt
     1801 tgcggttccg ggtgaccgag gcggatctgg cgcgcttccc aaaactgcgc ttcgtgtgcc
     1861 ggatgggtgt gggatacgac ggcatcgacc gggtagcgtg tgcaaaacgc caggtcgtgg
     1921 tgctgaatat cccggattat ggcacgaccg aggtggccga tcacgcgatg gctcttgcgt
     1981 tgacgttgcg gcgcggcgtg ctgctgcatc tggagtcgca gcgagcggat cctccggcgc
     2041 gatggggtta tgtcaatgat ccgttgctgg tgcgctcggg ggtgcagacg tttggcatag
     2101 tcgggatggg acggattgcg acggcagtgg ctctgcgggc caaggcgttc aacttccggg
     2161 tgatgtttta cgatccatat ttgccgaacg gggttgagct tgggttgggc gtgctgcgcg
     2221 cgaagacgct ggaggagttg ttgcggcaaa ccgatacgct gtcggtgcat acgcctctga
     2281 cactggaaac gcgggggatg ctggggttgc gggaattgtc tctgctaccg aagggggcgg
     2341 tggtggtgaa taccgctcga gggccgatcg tcgatatcga tgcgctggcg caattgctta
     2401 agagtggaca tttggcggga gtggggttgg acgttgtgcc ggtggagcct ccggtcgaac
     2461 cggtgccgga attgatccgg gcctatcggg cgcgagagcc ttggacgatt gggcggctgg
     2521 tgattacgcc gcacagcgcg ttttatacgc cgcaggcatg ggatgatatt cgttcaaagg
     2581 gagcggagac gatggcggct gcgttggcgg gaaagcccca gaatgtgatt gcgccggaga
     2641 gttattgaac gcaaggcgct ccgccctggg ccgggacatc ttgcagtgcc cggccatccg
     2701 attattgtac gggtacggcc tgacggcgac caaccgctcc gccaggtgtc agcaatctgg
     2761 tcaaagaccg gggtacaacc cggccaaact gggaggattg ccatgagtga tcgaacgatt
     2821 gcggatcctg cagtcgacgc catcgcgcgg cgctgcatca tcgcaggatt tatcggcttc
     2881 gccgtcgatt tcttcgacat ctacctgccg gccatggtcc tgacgccggt catcacttac
     2941 ttcgagccga agggtctgag cgaaacaacg acgacgacaa tttattattt tactgtcgca
     3001 acgacgctgc tcggccggcc ctgcggtgcc attatcttcg gccactgggc tgataagatc
     3061 ggccgccgcc tcgtcaccat ggtcagtatc gccggctttg gtaccctgac cgggttggtc
     3121 gcgttgcttc ccggctattc gtcaatcggt gtctggtcgc ttgtgctgtt gctcgtgctg
     3181 cgtttcatcg gcggcgtttt catgggtggc gagtacacgt ccaacaat
//
LOCUS       DATAVD010001858         5563 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2222721, whole genome shotgun sequence.
ACCESSION   DATAVD010001858 DATAVD010000000
VERSION     DATAVD010001858.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5563
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2222721"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..237
                     /locus_tag="VHX39_35420"
     CDS             <1..237
                     /locus_tag="VHX39_35420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996489.1"
                     /translation="RDAGRQDLALPAVEGLRPHPAANDTPAAFAAVWTGEATPETPLA
                     TIQSTIGLALLAMGRAEEPADAMGQAASIWARRR"
     gene            256..1656
                     /gene="thrC"
                     /locus_tag="VHX39_35425"
     CDS             256..1656
                     /gene="thrC"
                     /locus_tag="VHX39_35425"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010507688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEX3996490.1"
                     /translation="MRYISTRGQAPARDFADVLLAGLAEDGGLFMPESWPHFGPSDWR
                     SMRGLPYADLAARVMQPFVGTSIPFDVLRTICREAYAGFGHPAIVPLIQLDTGLFVQE
                     LFHGPTLAFKDMAMQVLGRLFDYVLTRDDKRVTIVGATSGDTGSAAIEACAGRERVDI
                     MILHPRGRTSDVQRRQMTTVPAANVGNIAVEGTFDDCQDLVKAMFADAGFRDEVRLSA
                     VNSINWARIAAQIPYYVAAALALGAPDREIAFSVPTGNFGNVFAAWAARRMGLPVARL
                     MIGSNRNDILVRFLESNDMSMAPVEPSLSPSMDIQVSSNFERLLFELLDRDPDTTRAT
                     MRAFRETGRMAVAEPVWHRARSLFHGFRLDDSGTEAEIRRLHDATGYLADPHTAIGIA
                     AAQALPCAGGIPVVAMATAHPAKFPDAMERATGQRPALPVRMADLFDRTERFAVLPND
                     LATIEAAVRALVGRNT"
     gene            2181..2330
                     /locus_tag="VHX39_35430"
     CDS             2181..2330
                     /locus_tag="VHX39_35430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006388428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996491.1"
                     /translation="MRKNRSIALTLLILVGIAPLLGACNTTAGAGRDISDAGHVITHD
                     ANTTR"
     gene            2573..2728
                     /locus_tag="VHX39_35435"
     CDS             2573..2728
                     /locus_tag="VHX39_35435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012974669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3309 family protein"
                     /protein_id="HEX3996492.1"
                     /translation="MPSLLLLIIVLVLLAGVFPAWPYSAHWGYFPSGGLGLVVIVLVV
                     LMVMGRI"
     gene            2777..3244
                     /locus_tag="VHX39_35440"
     CDS             2777..3244
                     /locus_tag="VHX39_35440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996493.1"
                     /translation="MRSLMFASAALLGMSAAIALAQAPAGLDPATGARPGHEPGVGVS
                     LPLSNSASNITPGDTRSVIAPTLPPSPAGTNATPEDYLRAARASLAAGQTGATQQSLE
                     MAETRALDRAVPIGQTDDPGSNRLVTEIRNARDALAAGDNQHAIQLIDRALAG"
     gene            complement(3333..>5563)
                     /locus_tag="VHX39_35445"
     CDS             complement(3333..>5563)
                     /locus_tag="VHX39_35445"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEX3996494.1"
                     /translation="VASQINALALAADHAVATGDPGALTLSEPRERVKAGIETLRVVD
                     PGDGGAIDEVQGSIDAFTRNLAEYAVQERARDALVANRFALIGQFEQVATEIAAAQGR
                     ALQAAAETEKAGRADLAVAAGSLQVLPFLMDAVSGAREAVTHFVASDTPETRKAVVDS
                     LDWLGMTAKTSASRQGAGQAGPDITAALAAWTDLFAKDPDAARAAAPALAGKIVEAVK
                     SIQVGFTAKLVASSARYDDEVSQLGTATAIRESALEVEALALRARLAEQALVYRHDPT
                     AAKTITAVAGQIAESAEDLLYRVIDTETQTKLKALIAQIGDYKQGLARLTEAQDKQAV
                     LLRDVNTATTTAIVTAQSLTNAQLAAMQGEHRRADLLLGLGVGLALILGLALALAIGR
                     GITRPLRMLAAVMERLAGGDKGVDIPGRERRDEFRQVADAVAVFRDNAVAMDRMAAER
                     AEAEIKGEAEKRQAVLALADSLDSTVSSVIDSIGTAAHGLQSTAGGLTASAEEATRQA
                     TAASGASDMALANVQAVAAAAEELSVSIAEISRQTESSVAVAARAVEDSNRTSSRMME
                     LSQAAVRIETVVALIQEIAGRTNLLALNATIEAARAGTAGAGFAVVASEVKQLASQTA
                     KATDEIAVQISGMQQATRESASAIEGIARTIDEMGAITTTISEAVDQQGLAASAIARN
                     IQQAASGTADASASIGSVSDAAKQTGDAADAVLSAASALARDSDSLRGQVSQFLQRVV
                     NG"
BASE COUNT          957 a         1844 c         1710 g         1052 t
ORIGIN      
        1 cgcgatgccg ggcggcagga tcttgccctt ccagcggttg aaggattgcg cccgcatccg
       61 gcggcgaacg acacgccggc cgccttcgct gctgtatgga ccggggaagc cacgccggag
      121 acgccgctgg caacaatcca atccaccatt ggccttgcac ttctggcgat gggccgcgcg
      181 gaagaacccg ccgatgcgat ggggcaggcg gcttcgatct gggcgcggcg ccgctaaacg
      241 cgtagaagac cggccatgcg ctatatttcc acccgcgggc aggcacccgc ccgcgatttc
      301 gccgacgtcc tgctggctgg tctggccgag gacggtggcc tgttcatgcc ggagtcctgg
      361 ccgcatttcg gaccgtcaga ctggcggtcg atgcgcggtc tcccctacgc cgacctcgcc
      421 gctcgggtta tgcagccctt cgtcggcaca tcgatcccgt tcgacgtgct gcgaacgata
      481 tgccgagagg cctatgccgg ctttggccat cccgcgatcg tgccgctgat ccagttggac
      541 accggcctgt tcgtgcagga actgttccac ggcccgacgc tcgccttcaa ggacatggcg
      601 atgcaggtgc ttggtcgcct gttcgactac gtgctgaccc gggacgacaa gcgggtaacg
      661 attgtcggcg caacctccgg cgataccggg tccgccgcca tcgaggcctg cgccgggcgt
      721 gagcgagtcg acatcatgat cctgcatccg cggggacgca ccagtgacgt gcagcgtcgg
      781 cagatgacca cggtgccggc cgcgaatgtc ggcaacatcg ccgtcgaggg cacgttcgac
      841 gactgccagg acctggtgaa ggccatgttc gcggacgccg gctttcgcga tgaagtgcgg
      901 ctgtctgcgg ttaattccat caattgggcg aggatcgcgg cgcagattcc ttactatgtc
      961 gctgcggcgc tggcattggg cgcaccggac cgagagatcg cgttcagcgt gcccaccggc
     1021 aattttggca acgtctttgc cgcctgggcc gcgcgcagaa tgggtctgcc ggttgcccgg
     1081 ctgatgattg gctcaaaccg caacgacata ttggtgcgtt tccttgagtc caatgacatg
     1141 tcgatggcac ctgtcgagcc gtcgctgtca ccaagcatgg atatccaggt cagttccaac
     1201 ttcgaacggt tgctgttcga attgctggat cgcgatcccg atacaacgcg ggcgacgatg
     1261 cgggcgtttc gggaaacggg ccggatggcc gtcgccgaac ccgtctggca ccgcgcacgc
     1321 agcctgtttc acgggttccg gctcgacgat tcggggaccg aggcggaaat ccggcggttg
     1381 cacgacgcga ccggttatct ggccgatccg cacaccgcca tcgggattgc cgccgcacag
     1441 gctttgccat gcgcgggcgg cattccggtg gtggcgatgg ctacggcgca tccggcgaag
     1501 ttcccggacg caatggagcg cgcgacgggc cagcggcccg cattgcccgt ccggatggct
     1561 gatttgttcg accggacaga gcggttcgct gtcctgccga acgatctggc cacgatcgaa
     1621 gccgcggtgc gggcgctggt gggacgaaac acctagtggt ccgatcccga cagaagcatc
     1681 cccatctggt cgggtgaatc ggcccactaa atcaaaggct ggtggctcaa atcagacgcg
     1741 aagcgcgccc tcgccaacgt gaattcaaca aaaaattgaa taaaaagttc cgtgatcaat
     1801 aatgcgccac ctataccgga gtatagaccg tgtacgttgg caggaaatgc cccgggtttt
     1861 ggcagatcaa caatccgtta tagtgatcgt tctggcgacg tcaggacatc ccgcccctgg
     1921 aaatcggcac gatccgtcgc gatactaaat acgtggtcgg ggcggggccg ccaaactgtc
     1981 ctccgtcgca ggtgtcgtaa ccaacgccac ctggggcaac tctatcttgc ctgccgttat
     2041 tctgacgaaa gagagttttc accgtgctca gccttaccga accgacgttg gtttcgggat
     2101 ttatcccgat cggtcctggc tatcccccgg tgatgacctc tcccgagtct cgtttgttaa
     2161 acacaaaagg aactatcatc atgcgtaaga atcgttcgat cgccttgact ctgcttatcc
     2221 tggtcggaat cgccccgctg ctgggcgcat gcaacacgac agccggcgcc ggccgcgaca
     2281 tttctgacgc tggtcatgtg attacccacg acgccaatac cacgaggtag tccgccgggg
     2341 cattgagcaa aggtcggggc ggcaggaccg ccgggcaaaa aaccgcaagc gacaacgacg
     2401 cagccccgac aacgcccccg ctctccgccc gtgacaaaag gatccggagg gccaccaaaa
     2461 aagcacatca agcagatcag tcacaagccg atggcatgaa caatatattt tagattgata
     2521 cgaaacccgt ggtccggcct ccatcggaag ccgcttcagg agaatcagat acatgccctc
     2581 cctccttctt ctgattatcg tcctcgtgct gctcgccggc gttttcccgg catggccgta
     2641 cagtgcccac tggggttatt tcccaagtgg cggccttggc ctggttgtca tcgtcctggt
     2701 cgtcctgatg gtcatgggac gcatatgacg ggacccgtcg cgcagttcac cacaccagct
     2761 tcagggagtt cacatcatgc gtagcctaat gtttgcctcc gccgctttgc tggggatgag
     2821 cgcggccatc gcgctggccc aggcgcccgc gggtctcgat cccgcgaccg gcgctcggcc
     2881 cggacatgaa cccggcgtgg gcgtctcttt gccgctttcg aatagtgcca gcaacattac
     2941 gccgggcgac accaggtcgg tcatcgcgcc tacgctgccc ccgtcacccg ccggcacgaa
     3001 cgccacgccg gaggattacc tgcgcgcggc tcgggcgtcg ctcgccgccg gccaaaccgg
     3061 tgcgacacag caatcgcttg agatggcgga aacacgcgcg ctcgatcgcg cggttccgat
     3121 cggccaaacc gacgacccgg gctctaacag gcttgtcacc gaaatcagga acgcccggga
     3181 tgctttggcg gctggcgaca atcagcacgc aatccagctc attgacaggg cgttggcagg
     3241 ctgacctccg ctccgtggga gcggtttcac ggctcccaaa atcaaaggct agtcgttcaa
     3301 atcggacggc actgtcggtc tgatttggac tactagccgt tcacgacacg ttgcaggaac
     3361 tggcttacct ggccgcgcaa tgaatcggaa tcgcgggcca gtgcggaggc agccgacaac
     3421 acggcatcag ccgcgtctcc ggtttgcttg gcggcatctg acacgctgcc gatactggcc
     3481 gatgcatcgg ccgtcccgga tgccgcttgc tggatgttgc gggcaatggc actggcagcc
     3541 aggccctgtt gatccaccgc ttcggagatc gtcgtggtga tcgcacccat ttcatcgatc
     3601 gtgcgggcaa tgccttctat ggcgctcgcc gattcacgtg ttgcctgctg cataccgctg
     3661 atctgcaccg cgatctcgtc ggtcgccttg gcggtttggg aggccaactg cttcacctca
     3721 gatgccacca cggcgaaacc ggcgcccgcc gtgcccgcgc gtgccgcctc gatggtggcg
     3781 ttcagcgcca gcaaattggt ccgcccagcg atctcctgaa tcaatgcgac caccgtctcg
     3841 atccgcaccg ccgcctggct cagttccatc atacggctgc tggttcgatt ggaatcttcc
     3901 accgcccgcg ccgccacggc gaccgacgat tcggtctggc ggctgatttc ggcgatcgat
     3961 accgacaatt cctcagccgc tgccgccacc gcctggacat tggccagcgc catgtcggac
     4021 gcgccggacg ccgccgtcgc ttgacgggtg gcttcctccg cgctggcggt cagaccgccg
     4081 gcggtggatt gcaggccgtg cgccgcggtg ccgatcgagt cgatgaccga actgaccgtg
     4141 ctgtccagac tgtcggccag cgctagcacc gcctgccgct tctcggcttc ccccttgatc
     4201 tcggcctccg cccgttccgc ggccatgcga tccatggcaa ccgcgttgtc ccggaatacc
     4261 gccaccgcat cagccacttg gcgaaactcg tcacgcctct cgcggccggg gatatcgacg
     4321 cctttgtcac cgccggctaa ccgctccatc acggccgcca gcatccgcag cggccgggtg
     4381 attccgcgac cgatggccag tgccagcgcc agccccagaa taagggccag gccgacacca
     4441 agccccagca gcagatccgc ccgccggtgc tccccctgca tcgcggcaag ctgggcattg
     4501 gtcaggcttt gcgccgtgac gatggcggtc gtggtcgctg tgttcacatc ccgcagcagc
     4561 accgcctgct tgtcctgggc ctctgtcaac cgcgccagcc cttgtttgta atcgccgatc
     4621 tgggcgatta gtgccttcag tttcgtctgg gtttcggtat cgatgacccg atagagcaag
     4681 tcctcggcag actccgcgat ttgcccagcg accgcggtaa tcgtcttcgc agccgttgga
     4741 tcgtggcgat agacgagcgc ctgctccgcc aaccgggccc gcagcgccag ggcctcgact
     4801 tcaagcgcgg actcgcggat tgccgtcgcg gtgccgagtt gggagacttc gtcgtcatac
     4861 cgggcggacg aggcaaccag cttggcggta aagcccactt ggatgctctt gaccgcctcg
     4921 acgatcttgc cggccagcgc gggtgccgcg gcgcgcgccg catccgggtc cttcgcaaac
     4981 aggtcggtcc atgcggcgag ggcggcggtg atgtcaggac cggcttgtcc agcaccctgc
     5041 cggcttgcgg atgttttggc cgtcattccc agccagtcca gggaatcgac aaccgccttc
     5101 cttgtttctg gcgtatcgga cgcgacgaaa tgggtcactg cctcgcgggc gccactgacg
     5161 gcatccatca ggaatggcag cacctgcagc gatcccgctg ccaccgcgag atcggcacgg
     5221 cctgctttct cggtttcggc ggcggcctgc agcgccctcc cctgggcggc ggcgatctcg
     5281 gtggcgacct gttcgaactg gccgatcagg gcgaagcggt tcgcgacgag cgcgtcgcgg
     5341 gctcgttcct gcactgcgta ttcggcgaga ttccgcgtga acgcgtcgat cgagccttgg
     5401 acttcatcaa tcgcgccacc atccccgggg tctacgaccc gcagggtctc aatacccgct
     5461 ttcacccgtt ctcgcggctc gctgagggtc agcgcgccgg ggtcgccggt cgccacggca
     5521 tgatccgccg ccagcgccag ggcgttgatc tgggaggcaa cat
//
LOCUS       DATAVD010001859         3121 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3525687, whole genome shotgun sequence.
ACCESSION   DATAVD010001859 DATAVD010000000
VERSION     DATAVD010001859.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3121
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3525687"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VHX39_35450"
     CDS             <1..276
                     /locus_tag="VHX39_35450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996495.1"
                     /translation="YPQTEAATSAMAYLSNLVMERWLPERGALHAEQPLKDRASGLTE
                     NNEIGADQCKRQQHWPSTQFVGRITKVEGCEWFAKRVRRVGLLAEYF"
     gene            complement(372..707)
                     /locus_tag="VHX39_35455"
     CDS             complement(372..707)
                     /locus_tag="VHX39_35455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996496.1"
                     /translation="MKRFLIYLLLFPAIATVALYAVLYILTGAVVDSVSGPAFCYLLF
                     IGPALVFALVDWLVSRTRIPGVIATTVFAFGVSALSAAWAGTIDVPVFGLVGAIPAAV
                     CSWLSNRSV"
     gene            875..1303
                     /locus_tag="VHX39_35460"
     CDS             875..1303
                     /locus_tag="VHX39_35460"
                     /inference="COORDINATES: protein motif:HMM:NF014168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEX3996497.1"
                     /translation="MALRVVDSLVLRCEPVILLLGRLCIGSLYLMSGINHWLDLTLLT
                     HFMAGLPGSVDAWAMLAATIEVASGLALVLGFRTREFALLLVLFNLSAAVIGHPYWSI
                     PNDATARWAQFIHFWKDIGLAGGAFFVLARGAGPLSVDRG"
     gene            complement(1347..1652)
                     /locus_tag="VHX39_35465"
     CDS             complement(1347..1652)
                     /locus_tag="VHX39_35465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996498.1"
                     /translation="MNLRRANADQARMQLFLYEVVARLVAIYLCVDCWRRIRNGLAER
                     KIAYFNTDVVDWLFFSWSNRFIFRDTAPVSYWITMGLQIMALAGCLVVAIVGWHTNS"
     gene            complement(1690..3069)
                     /locus_tag="VHX39_35470"
     CDS             complement(1690..3069)
                     /locus_tag="VHX39_35470"
                     /inference="COORDINATES: protein motif:HMM:NF016830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HEX3996499.1"
                     /translation="MSVSSGDRTKHRAAFALWLGLAAMSACVGGRAADAADLTIPGAG
                     TGTGPAPVPWLLGDWNGARTRLVNAGIDFQFGYTSEVAGNATGGQRQQVAYTDQWVVG
                     TTFDLTRLGVVPGGTIQVTWTDRNGSNLSDDAGLGTLQQVQEVFGRGQTARLTDFWYD
                     QKFAGGAVDWKIGRVPFGEDFASFACDFQNLTFCGAQPGNLVGNYIYNWPVSYWATRL
                     KFNLPGFGYFQVGVFDSNPGYLNVAQSALPVIYSGFTGALIPVELGWLPKFGDLQGTY
                     KFGGWYDTSSAPDVATDINGNPAVLSGQPLAQSRGRYGGYISFVQQVTRPSRASSAGG
                     LSLFLNATMADRRTATTDYQVAGGVIYTGPFRSRPQDDIGFGVGTTHVNSRVAWSEEL
                     QNLAGQNLVGFSPVAVQGNEYTMELYYTYRPLAGLQVRPNIQYVVDPGGTSANPNALV
                     FGLKTVANF"
BASE COUNT          618 a          949 c          968 g          586 t
ORIGIN      
        1 tacccgcaaa ccgaagcggc aacgagtgca atggcgtatt tgtcaaatct ggtcatggag
       61 cgttggttgc cggaacgggg cgcgcttcat gccgaacagc ctttgaaaga ccgtgcctcc
      121 ggtctgaccg agaataacga aataggcgct gatcaatgca aacgccaaca gcactggcca
      181 tccacccagt tcgtaggtcg catcaccaaa gttgaaggat gcgaatggtt tgccaaacgt
      241 gtcaggcgcg tcggattgct tgccgaatat ttttgacact gcgtacacgc aagcaaaaaa
      301 ggccagaaag aaatcgagga taccagccag gttgcgcttc cacatcggct ggggcggggt
      361 gtaggtcgcc atcacacgct cctgtttgac agccacgaac acaccgcggc cgggattgca
      421 ccgaccaggc cgaataccgg aacgtctatg gtgccggccc aggccgcgct gagagctgaa
      481 accccaaagg cgaaaaccgt ggttgcaatg acgccaggaa tgcgcgttct ggaaaccagc
      541 caatccacca aggcaaacac cagcgccggc ccaataaaca gcaggtagca aaacgccggc
      601 ccggacacgc tgtccacaac cgcgcctgtc aggatgtaga gcacggcata taacgcgacg
      661 gtggcgatgg cggggaacag caaaagataa atcagaaacc gcttcatgcc atcagttccc
      721 aaaccccttg gtcggtcttg ccgatgtttt cgttcaaccg gccgcggtgc ttgaattcgg
      781 ggtcaacgga tgttgatcca ggcgggcagg ggacgaacta ggaatctcct gggaattcat
      841 gcactgagag gcgaatgagt tcggggtgat cgtcatggcg ttgcgggttg ttgattccct
      901 ggttctgcgg tgcgagccgg tgatcctgtt gctgggccgg ctctgcatcg gatcgcttta
      961 tctgatgtcg gggatcaatc actggctgga cctgacactg ctcacccatt tcatggcggg
     1021 tctgcccggt tcggtggatg cttgggcgat gctggccgcg accatcgagg tcgcaagcgg
     1081 tctcgcgctg gttctcggct tccgcacccg cgagttcgcg ctgctgctgg tgctgttcaa
     1141 tctctctgcc gcggtgatcg gccaccccta ttggtcgatc cccaatgatg ccaccgcacg
     1201 ctgggcccaa ttcatccatt tctggaagga catcgggctc gccggcggtg ccttcttcgt
     1261 gctcgcgcgc ggcgccggac ccctgagcgt cgatcgaggg tgagcgggcg gccggagcgc
     1321 atagagattc ttcatgagcc tggcgctcag ctgttggtgt gccacccgac gatcgcaacg
     1381 acgaggcatc cggccaacgc cattatctgg aggcccatcg ttatccagta actgacgggg
     1441 gctgtgtctc gaaagataaa ccggtttgac cagctgaaaa acaaccagtc gacaacatcg
     1501 gtattgaaat acgcgatttt ccgctcggcg aggccgttcc ttattcggcg ccagcaatcg
     1561 acgcacagat agatcgccac gaggcgagcg acgacttcat aaaggaacaa ctgcatacgc
     1621 gcttggtcgg cgttcgcgcg tcgaaggttc aaggcctctc gtaactctcc cgtaactccc
     1681 gcgcgagtgt cagaaattgg cgaccgtctt cagcccgaac accagtgcgt ttggattggc
     1741 gctggtgccg ccggggtcga ccacatattg gatgttcggc cgcacctgca ggccggcgag
     1801 cggccggtag gtgtagtaga gctccatggt gtattcattg ccctgcacgg cgaccggact
     1861 gaagccgacc aggttctggc cggccaggtt ctgcaattct tccgaccagg cgacgcggct
     1921 gttgacgtgg gtggtgccga cgccaaatcc gatgtcgtcc tgaggccggg accggaatgg
     1981 gccggtatag atcacgccgc ccgcgacctg gtaatcggtg gtcgcggtgc ggcggtcggc
     2041 catcgttgcg ttgaggaaca ggcttagccc acctgcggaa ctggcgcgcg atgggcgcgt
     2101 cacctgctgc acgaagctga tgtagccgcc gtaacgcccg cgactctgcg ccagcggctg
     2161 tccgctgagc acggccggat tgccgttgat gtcggtggcc acgtccgggg cgctcgacgt
     2221 gtcgtaccag ccgccgaact tgtacgtgcc ttgcaagtcg ccgaacttcg gcagccatcc
     2281 gagctcgacc gggatcagag cgccggtgaa tcccgaatag atcaccggaa gcgcggattg
     2341 cgccacgttg agatagccgg gattggagtc gaacacaccg acctgaaaat aaccaaaacc
     2401 cggcaggttg aacttcagcc gggtggccca atagctgacg ggccaattgt agatgtagtt
     2461 gccgacgagg ttgccgggct gcgcgccgca gaaagtgagg ttctggaaat cgcacgcgaa
     2521 cgatgcgaag tcctcgccaa agggcacccg cccgatcttc cagtcgaccg cgccgccggc
     2581 gaatttctga tcgtaccaga aatccgtgag ccgcgccgtc tggccgcgtc cgaacacttc
     2641 ctgcacctgt tgcagcgtgc cgaggcccgc gtcatcgctc agattgctgc cgttgcggtc
     2701 cgtccaggtg acctggatcg tgccgcccgg caccacaccc agtcgtgtca gatcgaacgt
     2761 cgtgccgacg acccattgat cggtgtaggc gacctgctgc cgctgaccgc ccgtggcatt
     2821 gccggcgact tcgctggtgt agccgaactg gaaatcgatg ccggcattca ccagccgggt
     2881 tctcgcgccg ttccagtcgc cgagcagcca gggaacgggt gccgggccgg tgccggtgcc
     2941 agcgccggga atcgtcaggt cggcggcatc ggcggcgcga ccgccgacac aggccgacat
     3001 cgctgcgaga cccagccaaa gggcgaacgc cgcgcgatgc ttcgttcggt caccggatga
     3061 cacgctcatg accacgctcc ccaggttcga tctttcgtgt tcaatccttc aacgcgtagg
     3121 c
//
LOCUS       DATAVD010001860         6989 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2037249, whole genome shotgun sequence.
ACCESSION   DATAVD010001860 DATAVD010000000
VERSION     DATAVD010001860.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6989)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6989)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6989
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2037249"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            798..3968
                     /locus_tag="VHX39_35475"
     CDS             798..3968
                     /locus_tag="VHX39_35475"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEX3996500.1"
                     /translation="MGARFCVACGASLEVACTACGHLCPPAANFCGWCGAPRTEVPRR
                     NENSGERKQATVMFVDIVGSTELIVGLDAEAARDRLEPSVNAMVRAVRRFDGTVIRTL
                     GDGLKAAFGVPHTQEGHALLACRAALAMREAVAALPAPTTIRIGLHSGEVIAGTLDTG
                     SALEQEAQGMTVHLASRIEQAAEPGTICISSETWSLVETYCDAVSIGVRSLRGIPEPV
                     QIFRLTGLRPMINSDHFRNAGLTRLHGRDTELGVLQQALHDAGQGGVSVIGIAGAAGV
                     GKSRLCFEFGEWCRRRRVPVLEARAHVLGQATPLLPMVDMLRAVLRISPDMDPAQARQ
                     RIAERLWELDPSLADGLPLVAEFLNVADPEVPLPTLDPRTRQARLSDIYARMVKAAGR
                     RPGVVIVEDLHWLDEASREAMDVLVEAIRGTKAVMVVTFRPPWAVPWSAQHGYQELRL
                     AELEPGDMRQLVRDLVGDAPALEQVVTRVASQSGGNPFFAQELVLSLVQSGVLVGGRG
                     QYRLGAAGWDNPVLPATVEAVVGARIDRLSESQKQVLQIGAIVGKEFPLEVVRAVAGI
                     AERALQPLLDQLCASAMIQPCMTSAGASFSFRHPLIQEVAYAMQLRSRRTPLHAAVAD
                     AIKRFDWGLRDESAGLLAHHYEASGQALEAAMHLQRAARWIGRTNSAQALVDWKKVRL
                     LLQTQPASEVRDHFRARADGQLLNFGWREGMTVGEAKVYAEEALLHARKVGNRMHEVM
                     LLGGYGRIMAANGAADDYVALVREALALTDDASYPEVSLLLNGLLCQAYGHAGLFSEA
                     LAASDAALGIEEDDIQPTDGTMPEPTVAQMVGFDVLHWIRCLRSRLLVMLGRLDEAET
                     SLARVLQIDPEKVEPFHQCLPHWAMVELAWHRGNVASAKSHAYAVARFAEQSAMPYVS
                     VLANLCHGLFAFMEGDFGIAKLRFGEALEAARRSTAGLENEARLLALLAETDVRAGDN
                     TLATRSAAEAIGAARRRTDRYAECHATIVKVIALAAGQPTGWRQETAELLDRAEELIG
                     LSAAVIFRPILQEAQLAVDKVEQKCS"
     gene            4037..4546
                     /locus_tag="VHX39_35480"
     CDS             4037..4546
                     /locus_tag="VHX39_35480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996501.1"
                     /translation="MGGIVIRSHTIHELTGKVNSRFATGDSIQEMATIQKDFKIFSPG
                     KTLQQAYRALQIVPNDPREKRLWYRYLEYTKSLTSDQSGVTGHDRVIKARQENLESSR
                     PLPMFTKVHAESVDPRVTVTRGRPTPHDADEHIIISMPVRAPGEAATSSRPSTPPTPA
                     RTSRRKRAN"
     gene            4997..6115
                     /locus_tag="VHX39_35485"
     CDS             4997..6115
                     /locus_tag="VHX39_35485"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEX3996502.1"
                     /translation="MQPFWLVTRHADVTAVERRSAPFSAEPRSFLAKQTVEDRLRRIL
                     GKPHVLRGLLQMDDPDHGAYRALTQSWFTPAALAELEPWLANRACRIVEQISDRNDVF
                     DFSEAVAVPFSIGGIVHLMGLPEADEGIILKLSRGLVGPDDPDRRLAHHPADALVRAG
                     IGFRDYFGPVVADRRNCPRHDLSSVIANAQVRDAALPEYELMSYYMLVATAGHDTISF
                     CLTGGMEALLAHPEQFARLQSDPGLLDTAIEEMLRWTSPGRHIIRTATEDTTLGGQPI
                     RAGEAVALFMNSANRDETVFEAADTFRIDRHPNPHIAFGFGRHFCVGAHLARIEMQAL
                     FKALLPRLAAAELAAPITRTHSTMVTGIASLPVRFSWQ"
     gene            complement(6178..6978)
                     /locus_tag="VHX39_35490"
     CDS             complement(6178..6978)
                     /locus_tag="VHX39_35490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012812832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEX3996503.1"
                     /translation="MRESIAELMLEAAEEPEAQSAPSELNRQERLLIQNVLRLRETTA
                     DDVMVPRVDIVAMRADLTLEQAIEQIRDDGHSRLPVYREQLDEIIGMVHVKDLFPYVG
                     RPEAFSLEAILRKPLMVAPRIRVLDLLLQMRQQRVHLALVVDEYGGIDGLVTIEDLVE
                     TIVGEIDDEHDDEATPMVTERPDGTLDLNARLPVEDFEKRMGPVLSEDERDADIDTVG
                     GLVVTLAGRVPAKGEVISHPSGLEFRILDADARRIRRLRARRTVSQAA"
BASE COUNT         1310 a         2067 c         2257 g         1355 t
ORIGIN      
        1 tctgacggct gatccttgcg agcgagcgat tcgacgatga cgcgggatcc aaggccggcg
       61 gcggcgatcg cattgatgta gggatcaggg ccatcggtcc agagcagaac gcgggtcggg
      121 tcgggcatgg gcggaagatc ctgttcatgg gtgcgatgac cctaagcgcg acagcggccg
      181 acggcgaggg gaggctgcgt gttgtccggc gattgccctc gcgtatggca tgggcgaagc
      241 ggcggtagac aaatctcagc ccattgtggt gtggcaatgg cagccacctc ggtttttatc
      301 acgctggcgt agccattgtt catgcaagga tggcgaagcc tgagaaggtc gttcggctgc
      361 cttgtgtcac gccgcaccct gtgtcgcacg cgaaaatccg catttgccgg caacgctgtc
      421 attaaactgt caagcgatgc gtgcagagtc aggttagtgt ttcgatggcc tcgatcgcag
      481 gcgtgcgcgg tatggatacg caccgtcagc ataaaatccg tggcacgaca gtgacgcata
      541 ctgcgaggcc ggccacagac gttacttata aacaccttga gccaacagtc gtgaacaagc
      601 accgttcaag atgttaagca gtgacgactt tgctacttaa ttctgcaaca acgccacggc
      661 gctgcttgcc attgccacag tcatggcgca tcgttcctgt acagagacct aaatccgagg
      721 ggaataaatt ggaacccagg tcacttgccg cgagcgagtg gacggcgcga tgccaggaat
      781 gtgcccatga gaacgtgatg ggcgctcggt tttgtgtcgc gtgtggcgcc agcctggaag
      841 tcgcgtgtac cgcctgcgga catttatgcc caccagcggc aaatttttgt ggctggtgtg
      901 gcgcgccccg aaccgaagtt ccacgccgga atgagaattc cggcgagcgc aagcaggcca
      961 ccgtgatgtt cgtcgacatc gtcggctcga ccgaattgat cgtcggcctg gacgccgagg
     1021 cagcgcgtga tcggctcgaa ccatcagtca acgccatggt gcgtgccgtg cgccgcttcg
     1081 acggcaccgt tatccgcacc ctgggcgacg gtctgaaagc ggcatttggc gtgccacata
     1141 cccaggaagg ccacgcactg ctcgcctgcc gggcggcgct cgccatgcgg gaggcggtgg
     1201 cggccttgcc tgccccgacg accattcgca ttgggctgca ctccggcgag gtcattgccg
     1261 ggacgctcga taccgggtcg gcgctcgagc aggaagcgca gggcatgacg gtgcacctcg
     1321 ccagccggat cgaacaggct gccgagccag gcaccatttg catcagtagc gaaacctggt
     1381 cgctggtcga gacatattgc gatgctgtgt cgatcggcgt ccgttcgttg cggggtattc
     1441 cggagccggt gcagatcttt cggctgaccg gtctgcggcc gatgatcaat agcgaccatt
     1501 ttcgcaacgc cggcctgacc cgcctgcacg gacgggacac cgagcttggg gtgctgcaac
     1561 aggcgttgca tgacgccggt cagggtggcg tcagcgtgat cgggatcgcg ggagccgccg
     1621 gggtcggcaa aagccgcctc tgcttcgagt tcggcgagtg gtgccggcgg cggcgggtgc
     1681 cggtgctgga agcgcgggcg catgtgctcg gacaggccac gccactgttg ccgatggtgg
     1741 atatgctgcg ggctgttctg cgcatctctc ccgatatgga cccggcacag gcacggcagc
     1801 gaattgccga gcggctttgg gaactcgatc catcgctggc ggacggcctg ccgctggtgg
     1861 ccgaattcct gaatgttgcg gatccggagg tgccgctgcc gacgctcgat ccgcgcacgc
     1921 gccaggcacg gttgagcgac atctacgccc gcatggtcaa ggccgcgggc cggcggccgg
     1981 gggtggttat cgtcgaggat ctgcactggc tggacgaggc cagccgggag gccatggacg
     2041 tcctggtcga agcgatccgc ggcaccaaag ctgtcatggt ggtgacgttc cgtccgccct
     2101 gggcggtgcc ctggtccgcg cagcacggtt accaggagtt acgactggcg gaactggagc
     2161 cgggcgatat gcgccagctc gttcgtgacc tggtggggga tgctccggcg ctcgagcagg
     2221 tggtgacccg ggtggcgagc cagtcgggcg gcaatccgtt tttcgcccag gaactggtgc
     2281 tgtcgttggt gcagagcggc gtgttggtgg gtgggcgcgg ccagtatcgt ctgggcgcgg
     2341 cgggctggga taacccggtc ctgccggcga cggtcgaggc cgtggtcggc gcgcgcatcg
     2401 accggctgag cgaatcgcaa aagcaggtgc tgcaaatcgg cgcgattgtc ggcaaggagt
     2461 ttccgctgga ggtggtgcgc gcggtcgccg gcatcgccga gcgcgcgttg cagccgctgc
     2521 tggatcaact atgtgcgtcg gcgatgattc aaccgtgcat gacgagtgcc ggcgccagct
     2581 tctcattccg tcatccgctg atccaggagg tcgcttatgc aatgcaactg cgctcgcggc
     2641 ggactccgct gcatgcggcg gttgccgatg cgatcaagcg gtttgattgg gggttgcgcg
     2701 acgaatcggc cggattgctg gcgcatcatt acgaggcgtc cggacaggcg ttggaggcgg
     2761 cgatgcattt gcagcgcgcc gctcggtgga tcggccgaac caactcggcg caggccttgg
     2821 tggactggaa gaaggtgcgg ttgctgcttc aaactcagcc cgcgtccgaa gtccgagatc
     2881 attttcgagc tcgcgcggac ggacagctgc tcaacttcgg ttggcgcgaa gggatgacgg
     2941 ttggggaggc gaaggtctac gccgaagaag cgctgctcca tgcccgcaag gtcggcaatc
     3001 gcatgcacga agtgatgctt ttaggcggct acggacggat catggcggca aatggcgcgg
     3061 cggacgatta cgtcgcgctg gtgcgagaag ctttggcact gaccgacgat gcctcatatc
     3121 cagaagtgtc gcttctgttg aacggcttgt tgtgtcaggc ctatgggcat gcaggactgt
     3181 tttcagaagc gcttgccgcg agtgatgccg cattgggaat tgaagaggac gacatccagc
     3241 caaccgacgg cactatgccg gagccgactg ttgctcagat ggtgggtttt gacgtgttac
     3301 attggatacg atgtctgcgg tcgaggctgc ttgttatgct aggccggctg gacgaagctg
     3361 aaacatcgct cgcccgggtc cttcagatcg atcctgaaaa agtcgaacct ttccatcaat
     3421 gtctgccaca ttgggcgatg gtcgagctgg cgtggcaccg tggcaatgtg gcctcggcga
     3481 aatcgcacgc ctatgcggtt gcccgctttg ccgaacaatc ggccatgcca tatgtctcag
     3541 tattggcaaa cctctgtcat gggttgtttg ccttcatgga aggcgacttc ggaattgcca
     3601 aattgcgttt cggtgaggca ttggaggccg cccgccgcag cacagctggc cttgaaaatg
     3661 aggctcgctt gttggcgctc ttggccgaaa ccgatgtccg cgccggcgat aataccctgg
     3721 cgacgcggag tgcagcggag gcgatcggcg cggcacgccg gcgaacggat cgatatgccg
     3781 aatgccacgc gacaattgtc aaagttatcg cactcgcggc cggtcagccg accgggtggc
     3841 gacaggaaac ggccgagctg ctcgatcgag ctgaggaact cattggcctg agcgcggcgg
     3901 ttatcttccg gccaatcctg caagaggctc aactggcggt tgacaaagtc gagcagaagt
     3961 gttcttgagg cgatcaaact gcatccggaa tgtttccggg catggtttgg tcacaaacgg
     4021 gaacgtgggg gttaaaatgg gtggtatcgt tatccgctcg catacaattc acgagcttac
     4081 gggcaaggtg aacagccggt tcgcgaccgg cgattcgatt caggaaatgg cgacgatcca
     4141 aaaagatttt aagatattct cacccggtaa aacattgcag caggcctacc gggccctaca
     4201 gatcgtgccc aacgatccaa gagagaagcg gctatggtac agatatcttg agtacacaaa
     4261 gagcttgact tctgatcagt ccggggtgac cgggcacgac agggttatca aggctcgtca
     4321 ggaaaacctg gaaagttcca gaccacttcc gatgttcacc aaggtgcacg ctgaaagcgt
     4381 tgatccacgt gtgacggtta cgcgaggccg tccgacgcca catgatgcag atgagcacat
     4441 cattatttca atgccggtca gagcacccgg ggaggcggca acgtcatctc gccccagtac
     4501 gccgccaaca ccggcgcgga cttcgcgaag gaagcgggct aactgacttc gcagggcggg
     4561 cgcggatcag gccgtcaaat gaattcgtgg accactgtcg agaactggca acgaggcttg
     4621 gctgcggaga gtagctttat ggacggaaac gcgttcgaat cgcaaaaatt ttgcctgatt
     4681 aatgcgcact cgaccggtcc agtgagagca accgggctga cggggtgtcc tgccagcttt
     4741 ggttatactc gtgtggatac gacaagccgt gcataacgca gccggcctgg cgcgcgggga
     4801 agtcgccaaa ccagcggacg caagctttct ccacgcccca gccgagcacg cggacctgcc
     4861 ctgtccgaat cacgggatac atgaggccgc acggttcgtc atctcgcccc atggtcaaac
     4921 cgatgaaata cagcttcagg cagcattcag gctactgcga gcggaggctc ccgtttgctg
     4981 ggtcgatacc ccgggaatgc agcccttctg gctggtaacc cggcacgctg acgtaacggc
     5041 tgtggaacgc cggagcgcgc cgttctcggc agaaccacgc agctttctgg cgaaacagac
     5101 ggtggaggat cgactgcgca gaattctggg aaagccccat gtgctgcgcg ggctgctaca
     5161 gatggacgac ccagaccacg gcgcgtaccg cgcactgacg cagtcgtggt tcacgcctgc
     5221 ggcgctggcc gaacttgagc cctggttggc aaaccgcgcc tgtcgcattg tcgaacaaat
     5281 ctccgatcgg aatgatgtgt tcgatttttc cgaggcggtg gcggtgccgt tctccatcgg
     5341 cggcatcgtg catctgatgg gactgccaga ggccgacgaa ggcatcatcc tgaagctctc
     5401 ccgtggtttg gtggggccgg atgatcctga ccgccggctt gcccatcacc cggcggacgc
     5461 tctggtccga gccgggatcg ggttccggga ttatttcggt ccggtcgttg cggaccgccg
     5521 caactgtccc cgccacgacc tgagcagcgt catcgccaac gctcaggtca gggatgccgc
     5581 gttgcccgaa tacgagttga tgtcatacta catgttggtc gccacggcgg ggcacgatac
     5641 catctcattt tgtctcaccg gtggcatgga ggcgctgctc gctcacccgg agcagttcgc
     5701 caggctgcaa tcggatcccg ggctcctcga cactgcgatc gaggaaatgc tgcgctggac
     5761 ttcccccgga cggcatatca ttcgcaccgc aacggaggac acaacgcttg gcggtcagcc
     5821 aatccgggcc ggggaggctg tggcgttgtt catgaactcg gccaaccgtg acgagacggt
     5881 gttcgaggcc gccgatacgt tccggatcga ccgccacccg aacccgcaca ttgcctttgg
     5941 tttcgggcgc catttctgcg tcggtgctca cctggcccgg atcgaaatgc aagccttgtt
     6001 caaagcgttg ctgccgcggc tggcggcagc agaacttgct gcgccaatca cccggactca
     6061 ttccaccatg gtgacaggaa ttgcatcgct cccggtacga ttcagctggc aatagaggcg
     6121 ccgaccacgc ggggcaccat cgaggctaaa gcgtctattc actgccggcg cggccggcta
     6181 cgccgcctgt gacaccgtcc ttcgcgcccg caaccgccgg attctccgcg catccgcatc
     6241 gagaatccga aactccagcc ctgacggatg cgaaatgacc tcgcccttcg ccggcacccg
     6301 tcctgcgagc gtgaccacca agccgccgac cgtatcgata tcggcgtctc gttcgtcctc
     6361 gctcaacacc ggccccatgc gtttctcgaa gtcttcgaca ggcagcctgg cgttcagatc
     6421 gagcgtccca tccggccgtt ccgtcaccat cggcgtcgct tcgtcatcgt gttcgtcatc
     6481 gatctcaccg acgattgttt cgaccaggtc ctcgatcgtt accaacccgt cgatgccgcc
     6541 atattcgtcc accaccagcg ccaggtgcac ccgctgctga cgcatttgca acagcagatc
     6601 aagcactctg atccgcggcg ccaccatcag cggcttgcgt aagattgcct cgagcgaaaa
     6661 cgcctccggc cggccgacgt acgggaaaag atccttgacg tgcaccatgc cgatgatctc
     6721 gtcgagctgc tcgcgataca ccggcaggcg cgagtggccg tcgtcacgga tttgctcgat
     6781 cgcctgttcc agcgtcaggt cggcgcgcat cgccacgatg tcgacgcgcg gcaccataac
     6841 gtcgtcagcg gtggtttcgc gcagccgcag gacattctga atcagcagcc gttcctgccg
     6901 attcagttcg gacggtgccg actgggcttc cggttcctcg gccgcttcca acatcagttc
     6961 ggcgatggat tcgcgcagcg ttggttcct
//
LOCUS       DATAVD010001861         2798 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3149767, whole genome shotgun sequence.
ACCESSION   DATAVD010001861 DATAVD010000000
VERSION     DATAVD010001861.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2798
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3149767"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1749)
                     /locus_tag="VHX39_35495"
     CDS             complement(<1..1749)
                     /locus_tag="VHX39_35495"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEX3996504.1"
                     /translation="MTFVGQSVRRFEDARFLTGRGTFVDDVSLPGQLFAYVVRSPHAH
                     AVIERIATGGGPVFTYDDIADLGLMPCATAVATVGPMLVPPRPALANGKVRHVGDPVA
                     FVVAETAAAARDAAERVVVDYRPLPSVVDAAAALAPDAPSLWDQGNLSFRFRKGDPDA
                     VRIAMAGATHIVELELINNRLIIAPTETRAAIGRFENDVFHLFVSAASVHAIRDQLAG
                     VFRVPADRVLVSAPDVGGGFGIKNALYPEWIMLLWAAQHFGRPVKWIEDRAEDFISTA
                     QGRDNRTTARLALDADGRFLALDVTTIANLGAYMSGGGPGSSTNAPANAMGGGYVIPA
                     IAMDVRAAFTNTVPIDAYRGAGKPEANYLLERLIELAARRHGFDPAELRRRNVITTFP
                     YAKALGSVVDGGRFADNIDDVIGFADRAGFAARRAASRQRGLLRGLGLCCFMETARGA
                     PNEGAEIRFADDGTVELLVGTQSNGQGHETSYPQIAADLLGLPLERFRYIQADTERVR
                     AGNGHGGARSMHMGGAAMFRAANEVIAKGTAAAARLLQARPEEVAFHNGCFIAGERSV
                     ALLDVAREAPLDTYVWN"
     gene            complement(1746..>2798)
                     /locus_tag="VHX39_35500"
     CDS             complement(1746..>2798)
                     /locus_tag="VHX39_35500"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3996505.1"
                     /translation="EEAELATIAGALPGGWLQVISDFDDPGPEFAMLRRLVEQSGRPM
                     AITILQRDAVPEEWRRITGWIADAHRSGLPMLGQVLTRPTGIILGFEISQNPFLGRPS
                     YDAIADLPFADKIAELRRSERRAAILAEDTEDYGLRRRVRRWDRMFPMSDPPNYEPQP
                     EDSIAALAAQMGRDPAELAYDMLLENNGKTLLYRPLSNYTYGNLDTVHDMLAHDATII
                     GLGDGGAHVGILSDASALSTMLTHWTRDRKGERFSLPWAVKRITRDSAQAIGLHDRGL
                     VASGYKADLNVIDYDRLRVRAPEVVYDLPAGGRRLIQRADGYEVTIVSGTPVTRNGEA
                     TGALPGRLVRGAQANP"
BASE COUNT          556 a          933 c          841 g          468 t
ORIGIN      
        1 gttccagaca taggtgtcga gcggcgcctc acgtgcgaca tcgagcaaag cgacggaccg
       61 ctcgccggcg ataaagcacc cgttgtggaa cgccacctct tccggcctgg cctgtaacag
      121 ccgcgcggcg gcggcagtgc ccttggcaat gacctcgttt gcggcacgga acattgccgc
      181 gccgcccatg tgcatggacc gggcgccgcc atggccattg ccggcacgaa ccctctcggt
      241 gtcggcctgg atatagcgga accgctccag cggaaggcca agcaggtcgg ccgcaatctg
      301 cgggtagctg gtttcgtgcc cctgcccgtt cgattgagtg ccgaccagca gttccacggt
      361 tccgtcatcg gcgaaacgaa tttccgcgcc ctcgttggga gccccgcgcg cggtttccat
      421 gaagcagcac agaccaagtc cgcgcaacag accgcgttgc cgagacgcgg cacgacgtgc
      481 agcaaaacca gcgcgatccg caaagccgat gacgtcatcg atgttgtcgg caaagcgtcc
      541 gccatcgacg acgctgccca gtgccttggc gtagggaaag gtggtgatca cgttacgtcg
      601 gcgtaactcc gccggatcga agccgtgccg tcgcgcggcg agctcgatca accgctccag
      661 cagataattc gcctcgggct tgcccgcgcc gcgataggca tcgatcggca cggtattggt
      721 gaacgcggcc cgcacatcca tcgcgatcgc cggaatgacg tagccgccac ccatggcgtt
      781 ggccggcgcg ttggtggaac tacctggccc gccaccggac atgtaagctc caagattggc
      841 gatggtcgta acatcaagtg cgagaaaccg gccgtccgca tccaacgcca gacgcgccgt
      901 ggtccgattg tcccgacctt gggcggtgct gataaaatcc tcagcgcgat cctcaatcca
      961 tttgaccgga cggccgaaat gttgggccgc ccaaagcagc atgatccact ccgggtaaag
     1021 cgcgttcttg atgccaaagc cgccgcccac atccggagcg gataccagca ctcgatcggc
     1081 cggcacccgg aaaacgcccg ccagttgatc gcggatggca tgcacgcttg cggcagacac
     1141 gaacaaatgg aaaacgtcgt tttcaaaccg accgatggca gcgcgggttt ccgtgggtgc
     1201 aatgatcagg cgattgttga tcagctcgag ctcgacgata tgcgttgcgc ctgccatggc
     1261 gatacgcacc gcgtcggggt ctcccttgcg gaagcggaac gacagattgc cctggtccca
     1321 caatgacggc gcgtccggcg cgagcgccgc tgcagcatcc accaccgaag gcaacggacg
     1381 gtaatccacc acaacccgct cggccgcatc gcgcgctgcc gccgctgtct cggcgaccac
     1441 aaacgcgacc gggtcgccga cgtggcgcac tttgccattc gccaatgccg gtcttggcgg
     1501 aaccaacatc ggcccgacgg tcgcgaccgc tgtcgcgcaa ggcatcaatc cgagatcggc
     1561 gatatcgtca taggtgaaaa ccggtccacc gccggtagcg atccgttcaa tcaccgcgtg
     1621 cgcgtgtggc gaacgcacga catacgcaaa gagctggcca ggcagactga cgtcatcgac
     1681 gaaagtccct cggccggtca gaaagcgagc gtcctcgaac cgccgtaccg attggccgac
     1741 gaaggtcacg ggttggcctg cgcgcctcgg accagacgac ccggcagagc accggttgcc
     1801 tcgccattgc gggtgaccgg cgtgccggaa acgatggtca cttcatatcc gtcggcccgc
     1861 tgaatcaggc ggcgcccgcc ggcaggtaag tcgtaaacga cttccggagc gcgcacgcgc
     1921 agccgatcgt aatcgatcac attcagatca gccttatacc cgcttgccac caaccccctg
     1981 tcatgcagcc caatcgcctg ggcgctgtcc cgggtaatgc gtttcaccgc ccatggcagc
     2041 gaaaaccgtt cccctttccg gtcgcgtgtc caatgggtca gcatcgtgct gagcgcactg
     2101 gcatcagaca aaatgccgac atgcgcgccg ccgtcgccaa gaccgatgat cgtggcgtca
     2161 tgggccagca tgtcatgcac ggtatcgaga ttgccgtagg tgtagttgga caacggccga
     2221 tacagtaacg tcttgccatt gttttccagc aacatgtcat aggcgagctc tgccggatcg
     2281 cggcccatct gcgcggcgag ggcggcaatg ctgtcctccg gctgcggctc gtagttcggc
     2341 gggtccgaca tgggaaacat gcgatcccaa cggcgaaccc gccggcgcag tccgtaatct
     2401 tcggtgtcct cggccaaaat ggccgctcga cgttccgacc tacgcaattc cgcgatcttg
     2461 tccgcaaacg gcaaatcagc gatcgcatcg taactcgggc gcccgagaaa cggattctgc
     2521 gaaatctcga acccgagaat gatcccggtc gggcgcgtca gcacctggcc aagcatcggc
     2581 aggccggaac gatgcgcgtc agcaatccag ccggtgatcc ggcgccattc ttcgggcacg
     2641 gcatcccgtt gcaaaatcgt aatcgccatc ggccggcccg actgttcgac gagacgtcgc
     2701 agcatggcga attccggccc cgggtcatcg aaatcggaaa tcacctgcag ccagccgcct
     2761 ggcaacgcgc ccgcaatggt ggcgagttcc gcctcctc
//
LOCUS       DATAVD010001862         2285 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3526672, whole genome shotgun sequence.
ACCESSION   DATAVD010001862 DATAVD010000000
VERSION     DATAVD010001862.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3526672"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..418)
                     /locus_tag="VHX39_35505"
     CDS             complement(<1..418)
                     /locus_tag="VHX39_35505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996506.1"
                     /translation="MLPYPFPEPFDYRVPEGLAPEPGDLVLVPLNRREEVGVVWDFAG
                     GHSGALSGDIKSVPEHRLRPIIAIIDTPPMRHDIRRLIDWIAGYTLSPPGEVMRMALR
                     VLRPESRPASGWRRANADLGQSAGDGQESGRRPSDNL"
     gene            504..1157
                     /gene="fsa"
                     /locus_tag="VHX39_35510"
     CDS             504..1157
                     /gene="fsa"
                     /locus_tag="VHX39_35510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HEX3996507.1"
                     /translation="MKFFVDTADTAEIKSLASSGLLDGVTTNPSLVAKTGKKFTDIIH
                     EICAVVPGPVSAEVAATDYDGMMREAFVLREIARNVTVKVPLTPDGLRACRRLTSDGT
                     MVNVTLCFSAAQALLAAKAGATFVSPFVGRLDDVGQSGMALIADIMQIYSAYQFKTEV
                     LVASVRHPMHVVEAAKLGAHVATLPPPVLRSLFNHPLTDKGLAAFLADWGKTGQMIA"
     gene            1217..1876
                     /locus_tag="VHX39_35515"
     CDS             1217..1876
                     /locus_tag="VHX39_35515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996508.1"
                     /translation="MSDAGATAPPGDSAAVAAFLRANPDWLADNPELYRILTPPNRVH
                     GEALADHMAAMVLAERAHAAAMEERADDVLAAGRAAAGMASRVQEAVLALLRAADPLD
                     CVTGEIPSILSVDSAHLCIEAIMPGTLPLPEGTVARLLGGRQVLFRDTVTDARRLHAE
                     AAGLAGHDALVVVPAHGPPALLALLARDRTVLDPVRGAGALSFLGRAIAAAMGRSWGG
                     R"
     gene            2028..>2285
                     /locus_tag="VHX39_35520"
     CDS             2028..>2285
                     /locus_tag="VHX39_35520"
                     /inference="COORDINATES: protein motif:HMM:NF014898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEX3996509.1"
                     /translation="MTGFECRGSFLSWLALEKRASPLTVEAYGTDLTSFLGFLTQHQG
                     AEADQASLALVTQAEIRAWLASLANEGLVNASRARHLSAVRS"
BASE COUNT          376 a          754 c          758 g          397 t
ORIGIN      
        1 gcagattgtc agaggggcgg cggccacttt cctgaccgtc gccagcagac tggcccaggt
       61 cagcgttggc gcggcgccag ccggacgccg ggcgagattc cgggcgcagg acacgtaacg
      121 ccattcgcat cacctcgccc ggtggcgaca gcgtatagcc agcaatccag tcgatcaggc
      181 gacggatatc gtggcgcatc ggcggcgtgt cgatgatcgc gatgatcggc cgcagccggt
      241 gctcaggcac agatttgata tcgccggaga gcgcgcccga gtgcccccca gcgaagtccc
      301 agacgacccc gacctcttcc cgccggttca atggcaccag cacgagatcg cctggctcgg
      361 gcgccagacc ctcggggacg cgataatcga acggttcggg aaatgggtac ggcagcataa
      421 ccgccacccg tgttagttgg cggggggccg gggtcgtgct atccggctcg aacaaatccg
      481 tgggaacctc cccgaggaca ctgatgaagt ttttcgtcga taccgccgat acggcagaga
      541 tcaaatcgct ggcctccagc ggactgctcg acggcgtgac gaccaatcct tcccttgtgg
      601 ccaaaaccgg taaaaaattc actgacatca ttcacgaaat ttgcgcggtc gtccccggac
      661 cggtgagcgc cgaggtcgcg gcaacagact acgatggcat gatgcgcgaa gccttcgtgc
      721 tgcgcgagat cgccaggaat gtcacggtta aggtgccgct gacgccggat gggctgcgtg
      781 cctgccggcg gctcacctct gatgggacga tggtcaacgt gacgctgtgc ttctccgcgg
      841 cgcaggcact gctggcggcc aaggcgggtg ccactttcgt tagcccattc gtcgggcgat
      901 tggacgatgt cggccagtcc ggcatggcgc tgattgccga tatcatgcag atttatagcg
      961 cttaccagtt caaaaccgaa gtgctggtcg cctccgtgcg ccatccgatg cacgtcgtcg
     1021 aggccgccaa actgggcgcc cacgtcgcga ccttgccgcc gccggtgctg cgctcgctgt
     1081 tcaaccatcc actgaccgat aaaggcctcg cggcgtttct ggccgattgg ggcaagaccg
     1141 gtcagatgat cgcctgaggt gaccatggtc cacaccaatt cctgggcgtc gaagtctggg
     1201 ccatgagcat cacccgatga gcgacgcggg cgcgaccgcg ccgccaggcg actcggctgc
     1261 ggtcgccgca tttttgcgcg ccaatccgga ctggctggcg gacaatcccg aactgtatcg
     1321 catcctcacc ccgcccaacc gcgtgcacgg cgaggcgttg gccgatcaca tggccgccat
     1381 ggtgcttgcc gagcgtgccc atgccgctgc catggaggaa cgcgccgacg atgtgctggc
     1441 ggccggccgg gctgccgccg gcatggcgtc ccgtgtgcag gaggccgtgc tggcgctgct
     1501 gcgcgcggcc gatccgctgg actgcgtgac cggagagatc cccagcattc tgtcggtcga
     1561 ctcagcccat ctgtgcatcg aggcgatcat gccgggcacg ttgccgctgc ccgagggcac
     1621 cgtcgcgcgg ctgcttggcg gtcggcaggt gctgttccgc gacaccgtaa ccgatgcccg
     1681 ccggctgcac gctgaggcgg ccggtctggc tgggcacgac gcgctggtgg tggtaccagc
     1741 gcatgggccg ccggcactgc tggcgctgtt ggctcgcgat cggacggtgc tggacccggt
     1801 gcgcggcgcg ggcgcattgt cgtttcttgg ccgtgcgatc gccgctgcca tggggcgatc
     1861 gtggggcgga cggtgagata cgttgccacg ccatcgcaag cccagcgtgc gtcacccccg
     1921 gccccatctg cgccatcccc gcccaattgc gtcatccccg ggcttgtccc ggggaccctc
     1981 gccgcacgtt ccgctgacca ggtaacgacc gcccggcgcg accaaccgtg accgggtttg
     2041 aatgcagggg atcgtttctg tcctggttgg cactggaaaa gcgcgcctca cctctgacgg
     2101 ttgaagcata cggcaccgac cttaccagct tcctcggctt cctgacccaa catcagggag
     2161 cggaggccga ccaggcgtcg ttggcgcttg tgacccaggc ggaaatccgg gcatggctgg
     2221 catcgctggc gaacgaggga ctcgtcaacg catcccgcgc acggcatttg tcggcggtac
     2281 ggagt
//
LOCUS       DATAVD010001863         2842 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_548329, whole genome shotgun sequence.
ACCESSION   DATAVD010001863 DATAVD010000000
VERSION     DATAVD010001863.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2842
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_548329"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..761)
                     /locus_tag="VHX39_35525"
     CDS             complement(<1..761)
                     /locus_tag="VHX39_35525"
                     /inference="COORDINATES: protein motif:HMM:NF019157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /protein_id="HEX3996510.1"
                     /translation="MQPVRPTTVAAFIGLLLTGIAHATFAAPACAPDALNGLHVAGVT
                     VTEASPVAATPTAPALCRVHGTVVTHGEGVPNGLATFAMQVPDTWQQRFFSMGVGGNA
                     GRLVPAVNATDLAAAPGKGYVTIVTDTGHTGNGTDADWVIGADGKRDTVKVTDFFYRA
                     EHDVTVAGKQFAQAYYAAPVQHAYFDGCSTGGRMAMMEAERYPADYDGIIAGDPAMDY
                     NSGLLRFVVQKAALASAAAYIPQSLLVAIDKKVTAR"
     gene            1034..1888
                     /locus_tag="VHX39_35530"
     CDS             1034..1888
                     /locus_tag="VHX39_35530"
                     /inference="COORDINATES: protein motif:HMM:NF006128.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HEX3996511.1"
                     /translation="MPFEQIAYEVKGTTAIVTLNRPERRNALSSQLLRELNAALKEAD
                     EYNQVHCVVLRGAGPHFCAGADLNEFSSGRGPEYRGRTEIDDDVWRLEQGQKLRVELF
                     DMHKPVIAQVHGTCIGIGTELAWFCDLVIVADDARIGFPPVRDLGTPPGSMWLYHCGP
                     QWAKRLLLTGDSLSGKDAAEIGLALKSYPADQLETEVMRLADRIGLVDPHLLSANKRL
                     VNLGLELMGARTLQRIGAEIDARGHLAPKAVAFKATMREHGVKYAFQQRDAAFGSGFA
                     AVRGRDPD"
     gene            1982..>2842
                     /locus_tag="VHX39_35535"
     CDS             1982..>2842
                     /locus_tag="VHX39_35535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996512.1"
                     /translation="MALPIARFLPGVPLLSGTLHNRVQSWHASIGRFPTALAGGLVFG
                     VPFVLFYRLILFHFYVRGSFLLDTGLLASLMWHNTAALTVPASTGGFSFFEQHVAPVL
                     VLVSAASDLLPLTMPQLFAAFVGLCHGLLALAVFWLLVSGYGLRRGWKLALAALASIA
                     FAFNGLAIAIVRYPHFETFGAACLLLFFVALVLERRTIAVIAFLIAIATREDVGLHAF
                     GFLAVWAGLNWLRGVPWRQSRSIIGFAIAGLVYSATVLLLQHQAFLNVSTFVRVYLGD
                     PPWSQVSPGLV"
BASE COUNT          459 a          910 c          888 g          585 t
ORIGIN      
        1 cgggcggtga ccttcttatc aatagcaaca agtaacgatt gcgggatata cgccgccgcc
       61 gacgccagag ccgccttctg caccacgaag cgcagcagtc ccgaattata atccatggcg
      121 ggatcgccgg cgatgatgcc gtcgtagtcg gcgggatacc gctcggcctc catcatcgcc
      181 atgcgcccgc ctgtcgagca cccgtcgaaa tacgcatgct gcaccggcgc ggcataatac
      241 gcctgagcga actgtttgcc ggcgacagtc acgtcgtgtt ccgcacggta aaagaaatcg
      301 gtgaccttga ccgtatcgcg tttgccgtcc gcaccaatga cccagtcggc gtcggtgccg
      361 ttgccggtat ggccggtgtc ggtgacgatc gtgacgtagc ctttgccagg cgccgcggcc
      421 aggtcggtgg cattcaccgc cggcaccagc cgtccggcat tgccgccgac tcccattgag
      481 aagaagcgct gctgccacgt gtccggcact tgcatggcga aggtggccag gccattcggt
      541 acgccctcgc catgggtcac caccgtccca tgcacgcggc acagcgctgg cgcggtcgga
      601 gtggcagcaa ccggcgaggc ttcggtcacc gtcacgccag caacatgcaa cccgttcagc
      661 gcatccggag cgcaggccgg agctgcgaac gtagcgtgcg cgatgccggt caggagtaac
      721 ccgatgaacg ccgcgacggt ggtggggcgc actggttgca tggtccgttc cccgatcttt
      781 tgtctgccgt ccggcatcgt ccggccgaat gctactccga ctggacatta acctggccac
      841 tgtgctggat cagacggccc ggtcaagccg catcggctct tgcttggtcg ggacgttcat
      901 catccttgca gccccggctt gtccgagaga cccgatgagg cactgtgctg gatcggtcct
      961 cgggacgagc ccgaggatga cgatgagagg cgagccccag ccctgccaaa tgaaccgctc
     1021 aacggaggaa atcatgccat tcgaacaaat cgcctacgag gtcaaaggta ccacggccat
     1081 cgtgaccctc aaccgcccgg agcggcgcaa tgcgctcagt tcacagttgc tgcgcgagct
     1141 gaacgccgca ctcaaagagg ccgacgaata caaccaggtc cactgcgtcg tactccgcgg
     1201 tgccggcccg catttctgcg ccggcgccga cctcaacgaa ttttcctccg gccggggccc
     1261 ggagtatcgc ggccgcaccg aaatcgacga cgatgtctgg cgcctcgaac aggggcaaaa
     1321 actgcgtgtc gaactgttcg acatgcataa gccggtgatc gcccaggtgc atgggacatg
     1381 cattggaatt gggactgagc tggcgtggtt ttgcgacttg gtcatcgttg ccgacgacgc
     1441 tcgcatcggc tttccgccgg tgcgtgacct cgggacgccg cccggcagta tgtggctgta
     1501 tcattgcggc ccacaatggg cgaaacgctt gttgctgacc ggcgacagcc tgtctggcaa
     1561 agacgccgcc gagatcggcc ttgcgctgaa atcctacccc gccgatcagc tggagaccga
     1621 ggtcatgcgg ctcgccgacc gcattggtct cgtcgacccg catctgctgt cggccaacaa
     1681 gcgcctcgtc aatctcgggc tggagctgat gggtgcgcgc actctgcaac ggatcggtgc
     1741 cgagatcgac gcccgcggcc atctcgcgcc caaggcggtg gcgtttaagg cgacgatgcg
     1801 cgagcacggt gtaaaatacg ccttccagca gcgcgatgca gcgttcggca gcggctttgc
     1861 cgcggtccgc gggcgcgatc cggactgatc gggccggcag ccggccaacg ttcggcagcg
     1921 ttacccggct gcaattccaa ccaggccagg atgccggcgt agccccgaga aagcgcgccg
     1981 tttggcactt ccgatcgccc gtttcctgcc aggcgttccg ctgttgtcag gcaccctgca
     2041 caaccgggtt cagtcctggc acgcgagcat cggccggttt ccgaccgctt tggcaggcgg
     2101 cctcgtgttc ggcgtgccgt ttgtgctgtt ttaccggcta attctgtttc acttttacgt
     2161 gcgcggcagc tttttgctcg atactggcct gctggcatcg ttgatgtggc acaacacggc
     2221 tgctctcacg gtgccggcca gtactggcgg cttcagtttc ttcgagcagc atgtcgcgcc
     2281 ggtcctggtt ttggtgtcgg ctgcgagcga cctgctgccg ctgaccatgc cgcagttgtt
     2341 cgccgctttc gtcggcttgt gccacggatt gctggccttg gcggtatttt ggcttctcgt
     2401 cagcggctat ggtctccgcc gaggttggaa gttggctctt gccgcactgg catcgatcgc
     2461 gtttgcattc aacggactgg ccatcgccat cgtccgctat ccgcatttcg aaactttcgg
     2521 ggccgcctgc cttttgctgt tcttcgtggc gttggtgctg gagcgccgga ccatcgcggt
     2581 gatcgccttc ctgattgcca tcgcaacgcg cgaggatgtt ggtctgcacg cgttcggctt
     2641 tctggccgtc tgggctggcc tgaactggct gcgcggtgtc ccgtggcggc agagccgttc
     2701 gatcatcggc ttcgccatag ccggactggt ttattccgcc accgtgttgc tgttgcagca
     2761 tcaggccttt ctcaatgtgt cgacatttgt gcgggtctat ttaggcgacc cgccgtggtc
     2821 ccaggttagc cccggtctgg tg
//
LOCUS       DATAVD010001864         1629 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1106252, whole genome shotgun sequence.
ACCESSION   DATAVD010001864 DATAVD010000000
VERSION     DATAVD010001864.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1106252"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..441)
                     /locus_tag="VHX39_35540"
     CDS             complement(<1..441)
                     /locus_tag="VHX39_35540"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3996513.1"
                     /translation="MRFGLIIRGQYPLGDDMRVRLKEDLDAAKFAEQLGYDVIGKGSH
                     YSSYPFQYIQQIPYLCQVAMIAPKLRLCPGVVLLPLHSPLHVAEELASLDVMCNGKLI
                     FGAGIGYREVEFKAFGSTQKQSGRRFEECLEAVKRLWSEDFVTMK"
     gene            complement(500..1348)
                     /locus_tag="VHX39_35545"
     CDS             complement(500..1348)
                     /locus_tag="VHX39_35545"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HEX3996514.1"
                     /translation="MLNFGISLFFTEYSMSPVDLAKELEVRGFESVWSGGHSHIPAAM
                     KTPFPGDSGIKQHYIDVMDPFVTLTAAAMATKTLKIGTGVCLIAQRDPIQTAKLVASI
                     DQVSGGRFLFGVGDGWNQEEVENHGTVFATRHKRARETVEAMRAIWTQSPAEYHGELV
                     DFDPLQAWPKPVQKPHPPVLVGGAFPYSARRAIRYGDGWVPGSSKQYRDIVALIPRFR
                     QMEAEAGRDPMPITAWYPPRDLALLQRYHELGVVRAVFTVPSATAEVVLPALDEIGAL
                     MAAVNA"
     gene            1432..>1629
                     /locus_tag="VHX39_35550"
     CDS             1432..>1629
                     /locus_tag="VHX39_35550"
                     /inference="COORDINATES: protein motif:HMM:TIGR01552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HEX3996515.1"
                     /translation="MSTHSVAEARNQLSRLIDRALNGEAVIITRHGHPVVEIKPVTPR
                     SRPTREEKLAWLNANRVKLSGG"
BASE COUNT          340 a          504 c          476 g          309 t
ORIGIN      
        1 tttcatggtg acaaaatctt ccgaccacag gcgcttcacg gcttccaggc attcctcgaa
       61 acgcctgccg gattgctttt gggtggaacc gaaggctttg aattcgactt ctcggtaacc
      121 gatgccggcg ccgaaaatca acttgccgtt gcacatgaca tcgagcgagg cgagctcctc
      181 cgccacatgc aacggactgt gcaacggcaa cagcaccacg ccgggacata accgcagctt
      241 cggcgcgatc atcgcgacct ggcacagata gggaatttgc tggatatatt ggaacggata
      301 cgaactgtaa tgcgaaccct tgccgatcac gtcataaccc agctgctcgg cgaatttggc
      361 ggcatcgagg tcttctttca gacgaacccg catgtcgtcg cccagaggat actggccgcg
      421 gatgatgagg ccaaagcgca tggagactct cccggatggt tggtccgcag tgtaagcgcg
      481 ctggtccgat gcgtcgatgt caggcgttca ccgccgccat caatgcgccg atttcgtcga
      541 gcgcaggaag cacgacttcc gccgttgccg acggcactgt gaacaccgcc cgcacgacac
      601 ccagttcgtg gtagcgctgc aaaagcgcga ggtcccgggg tggataccag gccgtgatcg
      661 gcatcggatc gcgtccggcc tcagcctcca tctggcgaaa ccgcgggatc aaagccacga
      721 tatcgcgata ctgtttcgaa ctgcccggca cccaaccatc gccgtaacgg attgcccggc
      781 gggcggagta cggaaacgcg ccgccgacca gcaccggagg atgcggcttt tgcaccggtt
      841 tcggccaggc ctggagcgga tcgaaatcaa ccaactcgcc gtggtattct gcaggagatt
      901 gggtccagat cgcccgcatt gcctcaaccg tctcgcgtgc acgtttatgc cgcgttgcga
      961 acacggtgcc gtggttttcg acttcctcct ggttccagcc gtcaccgaca ccgaacagga
     1021 accgtccgcc cgagacctgg tcgatcgaag ccaccagctt cgccgtctgg atcggatcgc
     1081 gttgcgcgat cagacaaaca cctgtgccaa tcttcagagt tttggtcgcc atggccgccg
     1141 cggtcagtgt cacgaacggg tccatcacgt cgatgtagtg ctgcttgatc ccgctatcac
     1201 cgggaaacgg tgtcttcatg gcggcgggaa tgtgcgaatg cccccccgac cagaccgact
     1261 cgaaccctcg cacctccagt tccttggcaa gatcgaccgg ggacatcgaa tattctgtga
     1321 agaaaagcga aataccaaag ttcagcatgg gggcctcgtc ggggttcggc tggacgatac
     1381 aggcggtctt cgcgctggac aaaatggcca tcgattggcc agagtatggc catgagcacc
     1441 cacagcgtcg ccgaggccag gaatcagctt tcccgtctga tcgaccgtgc gttgaacggt
     1501 gaagcagtga tcatcacgcg gcacggtcat cccgtggtgg agatcaagcc ggttacgccc
     1561 cgctctcgcc ccacgcgcga ggaaaagctt gcctggctga atgcaaaccg cgtgaagctg
     1621 tccggtgga
//
LOCUS       DATAVD010001865         1586 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3150568, whole genome shotgun sequence.
ACCESSION   DATAVD010001865 DATAVD010000000
VERSION     DATAVD010001865.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3150568"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..261
                     /locus_tag="VHX39_35555"
     CDS             <1..261
                     /locus_tag="VHX39_35555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996516.1"
                     /translation="LQLAGGPNTDADRKRMFIVRANGAVVSRESIKGPWGNEFYHLKL
                     SPGDTIVVPDKTIKASALRGLLDWSQVFSQMMFGAVAASVIF"
     gene            500..>1586
                     /locus_tag="VHX39_35560"
     CDS             500..>1586
                     /locus_tag="VHX39_35560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996517.1"
                     /translation="MLLLSSAALVVAQTQPAKIGIFEDHQDVGTVLHAGSARFDSATG
                     TYTVAGSGENMWFGTDDFQFVWKKLSGDVAISADIAFVGNKGNNHRKAVLMIRQSLDG
                     NSAAVDIARHGDGLTSLQFRDKPGDNTHEVQSNVTAPVRVRLEKRGDYFYAFVAGTDE
                     HLQPAGASTKLALSGPFYVGIGVSAHDKDATETAIFSNVKVEELAANDRKQVLYSTLE
                     TVPIASTDRRVAYVAAAHFEAPNWSRDGSSFLFNQDGGIYRLAVNGGRPDRIATGAQL
                     QCNNDHGISPDGTMLAVSDSSQAKKSLVYTLPIGGGTPQQITSNGPSYWHGWSPDGKT
                     LTFTGQRPDHGIENFDIYTIPVEGGVET"
BASE COUNT          325 a          476 c          483 g          302 t
ORIGIN      
        1 ctgcaactgg cgggcgggcc caacaccgac gccgaccgca agcgcatgtt cattgtgagg
       61 gccaacggcg cggtagtcag ccgcgagtcc atcaaggggc cgtggggcaa cgagttttac
      121 catctcaagc tcagtccggg ggatacgatc gtcgttcccg acaagaccat caaggcctcg
      181 gcgctgcgcg gactgctgga ctggtcgcaa gtgttttcgc agatgatgtt cggcgccgtc
      241 gcggccagcg tgatcttctg attcagtcgc cggggcagac cgcttccttc gatcgaagtt
      301 ggctcgtgtc tggcgatggc tcgccctgcg cgcacccttg gttcaacgtt tcgttgaccg
      361 caactcgcgc gcaatggtat cgttcccacc ggatattcgg gacgtatcag cgccggggag
      421 tacgatagat cggcgcgatg atgtggagga gttcatgcgg gcacgcaatc ggcgatcgac
      481 tgtatcaagg ctgacttcct tgctgcttct ctcatccgcg gccctggttg tggcacagac
      541 gcaaccggcg aagatcggca tcttcgaaga ccatcaggac gtcggtacgg ttctccatgc
      601 aggttcagcg cgcttcgact ccgccaccgg gacctacact gtcgcgggca gtggcgagaa
      661 catgtggttc gggacggacg acttccaatt cgtctggaag aaactctcgg gcgacgtagc
      721 catctcggcg gacatcgcct ttgtcggcaa caaaggcaac aatcaccgca aagctgtcct
      781 gatgatcaga caaagtctgg atgggaattc ggcggcggtt gatatagcgc gacacggaga
      841 cgggcttacc tcgctgcagt ttcgcgacaa gcccggagac aacacccacg aggtgcagtc
      901 gaacgtcacg gctcctgtgc gcgtgaggct ggagaaacgg ggagactatt tttacgcctt
      961 cgtcgctgga acggatgagc atctccagcc ggcgggcgcc tcaacgaaac tggcgctgag
     1021 cggcccgttc tacgtgggca ttggcgtttc agcgcacgac aaggatgcga cggagaccgc
     1081 gatcttctcc aacgtcaagg tggaggagct agcggcaaac gaccgaaaac aggtcctcta
     1141 cagcaccctg gagaccgtgc cgattgcttc gacggaccgt cgcgtggcct atgtcgcggc
     1201 ggcacatttt gaggctccca actggtctcg cgacggttcc tcttttctgt tcaaccagga
     1261 tggtggcatc tatcgcctgg cggtgaacgg cggcaggcct gaccgcattg cgactggagc
     1321 ccagttgcag tgcaataacg accacggcat ctccccggac ggcacaatgc tcgctgtcag
     1381 tgactcctcg caagccaaaa aatcgttggt gtacacgctg cccatcggcg gtggaacacc
     1441 ccaacagatc acaagcaacg gaccctccta ctggcacggc tggtcgccgg atggaaagac
     1501 gctaaccttc accggacagc ggcccgatca cgggattgaa aacttcgaca tctacacgat
     1561 ccccgtggaa ggtggcgtcg aaaccc
//
LOCUS       DATAVD010001866         3911 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3527226, whole genome shotgun sequence.
ACCESSION   DATAVD010001866 DATAVD010000000
VERSION     DATAVD010001866.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3911)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3911)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3911
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3527226"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..440)
                     /locus_tag="VHX39_35565"
     CDS             complement(<1..440)
                     /locus_tag="VHX39_35565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996518.1"
                     /translation="MKYDLLLTGGEVMDPGAGLRGVMDVGIAGGKIVAVAPSLPANEA
                     LRTISVKDRLVTPGLVDIHAHVFVNAHDMGGCTDELCRASGVTTLCDAGSAGSSNFAG
                     LRHVLDREVRTRVRAFVNLSAIGITGTSRGGELSHFPYADPEGCA"
     gene            complement(515..1099)
                     /gene="pth"
                     /locus_tag="VHX39_35570"
     CDS             complement(515..1099)
                     /gene="pth"
                     /locus_tag="VHX39_35570"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEX3996519.1"
                     /translation="MLLWVGLGNPEPGMARNRHNIGFMALDVIAIRHGFSPWRRRFKG
                     LTAEGTVGGEKILALKPLTYMNASGEAVQAAASFYKLPPDAITAFHDELDLVPGKLRV
                     KFGGGTAGHNGLRSLDRQLGTAEFWRVRMGIGHPGSKERVLPYVLGDFSKDEVVWLIP
                     FLDAIADAAPLLASGKAPDFMTRVALLTQPPPPA"
     gene            complement(1141..1794)
                     /locus_tag="VHX39_35575"
     CDS             complement(1141..1794)
                     /locus_tag="VHX39_35575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEX3996520.1"
                     /translation="MANVVTIEAETRARAGKGAARATRRAGKVPAVIYGGKQEPALIA
                     LDPREVLRELHRAGWQSRLYELSTAGEPVRALIRGVQFHPVTDNPIHVDFQRLVAGER
                     IKVAVPVHFENDGISPGLKRGGMLNVVRHAVEVYCDADNIPDQFTADLAQLDFNDNVR
                     WHDLHGTENTRAVIDRDFVVATVVAPTKVEESAAATAAVAPAAAAPAKAPAKAPAKR"
     gene            complement(1885..2346)
                     /locus_tag="VHX39_35580"
     CDS             complement(1885..2346)
                     /locus_tag="VHX39_35580"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEX3996521.1"
                     /translation="MANEGGCACGQIRYRLQTAPMFVHCCHCHDCQRQTGSAFVLNAL
                     IETDRMDVLQGQPALSEMPTDSGRPHHIARCPNCGTAVWSHYGGVNKLTFVRVGTLDD
                     PAAVPPDVHIYTRSKLPWIGLPPELPAFEAYYDSKTVWPAASLARRRAVFA"
     gene            2490..3587
                     /locus_tag="VHX39_35585"
     CDS             2490..3587
                     /locus_tag="VHX39_35585"
                     /inference="COORDINATES: protein motif:HMM:NF014381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD/NADP octopine/nopaline dehydrogenase family
                     protein"
                     /protein_id="HEX3996522.1"
                     /translation="MAETTVAIIGAGIGGIYLAAELGSLGCRLRLTDLDDSRLAAVRA
                     RGGLDVEPGGFVAIERVTTDLATAIDGAQVIAVCTGGTYQESVAAGLAPLLRDGQTIL
                     LIQGNTGGSLVFRRVLDAASCRAAVDIAEMDNYPYSCWRPEPTTIRPIVRKKFLQIAS
                     FPGNRIDPVFALLGPLFPHAVAAPTVISTSFTNANAMLHVANCVANAGKIDRGESYKF
                     YAEGVTPSVARLYSAINAERVAVAAALDAQVPNLEDWFESTYGVRAATLPETCQLLTT
                     NSDGPYQATGTPRAWDHKYIAEDVPVGLMPMSGLGHASGVPTPRIDAVVELTRTLAGT
                     DFSDTARTLERMGLAGMDASRIRRTLMEGFR"
     gene            complement(3549..>3911)
                     /locus_tag="VHX39_35590"
     CDS             complement(3549..>3911)
                     /locus_tag="VHX39_35590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEX3996523.1"
                     /translation="QIGAAAREAQQPPEGLNLLDVSGQIADFADTAAIIANLDLVISV
                     DTSVAHLAGAMGKPVWLMNVFDTDWRWMLNRDDSPWYPTLRVFRQPTSGDWDSVIRNV
                     ATALRCLPKPLHERPPYP"
BASE COUNT          726 a         1299 c         1195 g          691 t
ORIGIN      
        1 gcgcagcctt ccgggtcggc gtatgggaaa tgcgacaact ccccgccgcg cgaggtgccg
       61 gtgatgccga tcgccgacaa attgacgaag gcgcgaactc tcgtgcgcac ctcacggtcc
      121 agcacgtgcc gcagcccggc gaagttcgag gacccggcac tgccggcgtc acacagcgtc
      181 gtcacgccgc tcgcccggca gagttcatcg gtgcaaccgc ccatgtcgtg cgcgttgaca
      241 aagacatgag cgtgaatgtc gaccagacca ggtgtcacca gccggtcctt gacgctgatc
      301 gtgcgcaatg cctcgttggc cggcagcgat ggcgcaaccg caacgatctt gccgccggcg
      361 atcccgacat ccataacgcc gcgcaggccg gcgccgggat ccatcacctc accgccggtc
      421 agcaaaagat cgtatttcat cgctccctcc cctgcgttat cgcattgccc cagatgctcg
      481 ttcccccacg ccttactggc aaccccctgg gcgattacgc tggtggtggg ggctgggtca
      541 gtaacgccac ccgcgtcatg aaatccggcg ctttcccgga tgccagcaac ggtgcggcat
      601 ccgcgatcgc atccagaaac gggatcagcc aaaccacctc gtccttggag aaatccccga
      661 gcacataagg cagcacacgc tctttcgagc ccggatggcc aatgcccatg cgaacgcgcc
      721 agaactccgc tgtgccaagc tgccgatcga ggctgcgcag gccattatgg cccgcggtgc
      781 caccgccaaa cttaacccgc agtttgcccg gcaccagatc gagttcgtca tgaaatgcgg
      841 tgatcgcatc cggcggcaat ttataaaacg acgccgccgc ctgcaccgcc tcacccgatg
      901 cgttcatata ggtcagcggc ttcaacgcga ggattttttc gccgccgacg gtgccttctg
      961 ccgtcagacc tttgaaccgc cgccgccacg gggaaaatcc gtggcggatc gcgatcacgt
     1021 ccagcgccat aaagccgata ttgtgccggt tccgcgccat ccccggctcc ggattgccga
     1081 ggccgaccca gagcaacatc acactttccc cgtcaggccc gcacgatatg cccgaaacga
     1141 tcagcgcttt gcgggtgctt tcgccggagc cttggccggt gcggcagccg caggagccac
     1201 agcagccgtg gcggcagcag attcctcgac cttggtaggt gccacgaccg tcgcaaccac
     1261 aaagtcccga tcaatcaccg cccgagtatt ctcggtcccg tgcagatcgt gccaacgcac
     1321 gttgtcattg aaatcgagtt gcgcgagatc ggcggtaaac tgatccggaa tgttgtccgc
     1381 atcgcagtac acttcgaccg cgtgacggac gacgttcaac atgccgcctc gtttcaggcc
     1441 cggactgatg ccgtcgttct cgaagtgcac cggcaccgca accttgatcc gctctcccgc
     1501 caccaggcgc tggaaatcga catggattgg gttgtccgtg acggggtgaa actgcacgcc
     1561 acggatcagc gcgcgcaccg gttcgcccgc ggtcgagagt tcgtaaagcc gggactgcca
     1621 gcctgcgcga tgcagctcac gcaacacctc gcggggatcc agcgcgatca gcgccggctc
     1681 ttgctttcca ccataaatta ccgcaggcac cttgcccgct cgccgagttg cccgcgccgc
     1741 ccccttaccg gctcgcgcgc gtgtctcggc ctcgatcgtg acgacgttgg ccattgtctt
     1801 tctcctgaat gccaaagcgc cggcctccag gggtgccggc gcacgggcgg cgtttacagg
     1861 accgccgcgg caggggcaag gggatcaggc aaagaccgcg cggcggcggg ccagacttgc
     1921 ggccggccaa accgtcttcg agtcgtagta ggcctcgaac gccggcaact cgggtggcaa
     1981 tccgatccag ggcagcttcg agcgcgtgta gatatgcaca tccggcggca ccgcagccgg
     2041 atcgtcaagc gtcccgacgc ggacgaacgt cagcttgttg acgcccccgt aatggctcca
     2101 aaccgcggtg ccgcagttag ggcaccgcgc aatgtgatgc ggtctgccgc tgtcggtcgg
     2161 catttcggac agcgctggct ggccttgcag aacgtccatg cggtcggttt caatcagcgc
     2221 attcagcaca aaagccgagc cggtctggcg ctgacaatcg tggcaatgac agcagtgcac
     2281 gaacattggt gccgtttgca gccgatagcg gatttggccg caggcgcagc caccttcgtt
     2341 tgccataggc gtgtaccctg tttgttctgt cgaactataa ccaatcgatg cgccaccagc
     2401 aagccctgtt gctcgaacgc cggccaggtt ggcacattgc ggcccggacc gggccacaac
     2461 aagccggcgc caactgggag gatacaacga tggcggaaac gacagtcgcg attatcggcg
     2521 ccggcatcgg cggcatctac ctcgccgcag aactgggctc gctcggttgc cgcctgcggc
     2581 tgaccgatct cgatgacagc cgcctcgccg cggtccgcgc ccgtggcggt ctcgacgtcg
     2641 agccgggagg cttcgttgcg atcgagcgtg tgacgaccga cctcgccacc gccatcgacg
     2701 gcgcccaggt gatcgccgtt tgcacgggag gcacgtatca ggaaagcgtc gcggccggtc
     2761 tcgcaccgct attgcgagat ggtcagacca ttttgttgat ccagggcaat accggcggct
     2821 cgctggtgtt tcgtcgcgtg ctcgatgccg cgtcctgtcg cgccgcggtc gatatcgccg
     2881 agatggataa ctatccgtat tcctgttggc ggccggaacc gacgacgatc cggccgatcg
     2941 tgcggaagaa atttctgcag atcgcaagct ttccgggcaa ccgtatcgat ccggtctttg
     3001 cccttttggg cccgctgttt ccccatgccg tcgcagcacc gacggtgatc tcgaccagct
     3061 tcaccaacgc caacgcgatg cttcacgtcg ccaattgcgt tgccaatgcg ggcaagatcg
     3121 accgcggcga aagttataag ttttatgccg aaggcgtaac cccgtcggtg gcgcggctgt
     3181 acagcgcgat caacgccgag cgagtcgccg ttgctgccgc tctggacgcc caggtgccga
     3241 atttagaaga ttggtttgaa agcacgtacg gggtgcgggc tgcgacattg ccggaaacct
     3301 gccagctgct gaccaccaac agcgacggcc cctatcaggc gaccggtacg ccgcgcgcct
     3361 gggatcacaa atacatcgcc gaagatgtgc cggtcgggct gatgccgatg agcggtctgg
     3421 ggcacgcgtc cggggtgccg acgccgcgga tcgacgcggt tgtcgaactc acgcggacgc
     3481 tggccggcac cgacttcagc gacacggcgc gcacgcttga gcgtatgggc ctcgcgggca
     3541 tggacgcgtc acggatacgg cggacgctca tggaggggtt tcggtaggca ccgcaacgcg
     3601 gtcgcgacgt tccgaatcac cgaatcccag tcaccggatg ttggctggcg gaagacgcgc
     3661 agcgtggggt accacggact gtcgtcacgg ttaagcatcc aacgccagtc ggtgtcgaac
     3721 acgttcatca gccaaaccgg cttgcccatc gcgccggcca aatgagcgac cgacgtatcg
     3781 acggaaatca ccaggtccag attggcgatg atcgcggcgg tatcggcgaa gtcggcgatt
     3841 tgtccgctga cgtccagcaa attcaacccc tccggcggtt gttgagcctc gcgcgcggcg
     3901 gccccaattt g
//
LOCUS       DATAVD010001867         1815 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2224186, whole genome shotgun sequence.
ACCESSION   DATAVD010001867 DATAVD010000000
VERSION     DATAVD010001867.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2224186"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..936
                     /locus_tag="VHX39_35595"
     CDS             <1..936
                     /locus_tag="VHX39_35595"
                     /inference="COORDINATES: protein motif:HMM:NF019222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1552 domain-containing protein"
                     /protein_id="HEX3996524.1"
                     /translation="AAKYGQETLLPSVEISVEDPGSGSSNCGEGYSCVYTNTIAWASP
                     TTPLPMELNPQVVFERMFGSGSTAEQRAQRRERNQSILDSVNDKIKGMRTEISVPDRS
                     RLDAFTDNVREIERRLQIAAKATNAAPVNFAVPPGIPQSFDEHIKIMFDLLVLGFQAD
                     ITRVSTMLFARDLTGRVYPECESPTLGFHGGSHHGEVPNLIKQLSKINQYHVKVLAYF
                     VEKLANTNDGDGSLLDHSLLMYGSNMGNSNQHVHYDVPHILIGGNNGKLQGGRHLAYP
                     TKQVPTGNLLLSILDQFDIHRDSFGDSTGPLPGLV"
     gene            1005..>1815
                     /locus_tag="VHX39_35600"
     CDS             1005..>1815
                     /locus_tag="VHX39_35600"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEX3996525.1"
                     /translation="MAGTAFAQAVIADAASTGNTMEIQRLLKRGADVNAQQADGATAL
                     QWAAYRGDSQMAELLLKAGAKPDLANHDGATPLWLAAARGDAAVIEALLKGGADANEQ
                     LPLGRRPLMLAARSGNVAAVHALLAHGADVNASESERGTSALMQAADQGHADVLKELI
                     QHGASVAATSKLVMRDGRTAALGNSEDPRRAVRQQDIAVLCEAKPPDLQQVRIQREML
                     FGASAKNTPDADLCKGIKRNGLGFVLVAGAGGNHGAGAGGDVTEDADVAPAV"
BASE COUNT          370 a          555 c          578 g          312 t
ORIGIN      
        1 gccgccaagt acgggcagga aacgctgctg ccgtcggtgg aaatttcggt ggaagacccg
       61 ggttcgggtt cgagcaattg cggcgaaggt tacagctgcg tctataccaa tacgatcgcg
      121 tgggcatcgc cgaccacgcc gttgccgatg gaactgaacc cgcaggtcgt attcgagcgg
      181 atgttcggca gcggcagtac cgctgagcaa cgcgcacagc gccgcgagcg taaccagagc
      241 atcctcgatt cggtcaacga caagatcaaa ggtatgcgca ctgagatcag cgtgccggac
      301 cgttcacgtc tggatgcctt caccgacaat gtgcgcgaaa tcgagcggcg tctgcagatc
      361 gccgccaaag cgaccaatgc cgcaccggta aatttcgcgg tgcccccggg cattccacag
      421 tcgttcgacg agcacatcaa gatcatgttc gacctgttgg tgctcggctt ccaggccgat
      481 atcacccgcg tcagcaccat gctgttcgcg cgcgatctca ccggccgtgt ctatccggaa
      541 tgcgagtcac cgacgctggg atttcatggc ggctcgcacc acggtgaagt tccgaatctg
      601 atcaagcaac tgtcgaagat caaccagtat cacgtaaagg tattggccta cttcgtcgag
      661 aaactggcca acaccaacga tggcgacggc tcgctgctcg atcattcgct gctcatgtac
      721 ggcagcaaca tgggcaactc gaaccagcac gtgcactacg acgtgccgca catcctgatc
      781 ggcggcaaca acggcaaact gcagggcggc cgccatctcg cgtacccgac caagcaggta
      841 ccgaccggca atctgctgtt gagcattctc gatcagttcg acatccaccg tgacagtttc
      901 ggcgatagca ccggacctct gcccgggctg gtgtgatggg gtcggtgagg aagagcatgc
      961 gtagcgttgc agtgagagct ctctctgccg tgttgctcgt ggggatggcc ggcaccgcgt
     1021 tcgcgcaagc cgtcatcgcc gatgccgcaa gcacgggcaa caccatggaa atccagcgtc
     1081 tcctgaaacg tggcgccgat gtgaatgcac agcaggccga cggcgccacc gccctgcaat
     1141 gggcggccta tcgcggcgac tcacaaatgg ccgaactgct gctgaaggcc ggggctaaac
     1201 cggacttggc aaaccacgat ggcgccacgc cgctgtggct ggcggcggcg cgcggtgatg
     1261 ctgccgtgat tgaggcattg ctcaagggcg gtgccgatgc caacgaacag ctgcccctcg
     1321 gccgccgtcc gctgatgctc gccgcacgct cgggtaatgt cgctgccgta catgcattgc
     1381 tggcacacgg cgccgacgta aatgccagtg agtcagaacg gggtaccagc gcgttgatgc
     1441 aggcggccga ccagggccat gccgacgtgt tgaaggagct gatccagcac ggcgccagcg
     1501 tggcggccac gtccaaactg gtgatgcgcg atgggcgcac ggcagcgttg ggcaactccg
     1561 aagatccgcg ccgcgccgta cgtcagcagg acatcgcggt gctgtgcgag gccaagccgc
     1621 ctgatctgca acaggtgaga atccagcgcg aaatgttgtt tggcgccagc gctaaaaaca
     1681 cgcctgacgc cgatttgtgc aaagggatta aacgcaatgg cttgggcttc gttctcgtgg
     1741 ccggcgctgg cggcaaccac ggggcaggtg cgggtggcga cgtgaccgag gacgcggacg
     1801 tcgccccggc agtgg
//
LOCUS       DATAVD010001868         3242 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1292951, whole genome shotgun sequence.
ACCESSION   DATAVD010001868 DATAVD010000000
VERSION     DATAVD010001868.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3242
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1292951"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..652)
                     /locus_tag="VHX39_35605"
     CDS             complement(<1..652)
                     /locus_tag="VHX39_35605"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HEX3996526.1"
                     /translation="MRLPMDPEGYYARLEVEPSARSEAITAAYRRKARLVHPDVPVTG
                     NASAFVELKQAYDVLIHIQRRAAYDRSARQPQQVPPSRAASYDPGTDDPGEIGAKPFP
                     AMATPPTRHPRLRDLPIVVWVGMAALLMVGVVEVGLHLTSSPAQEKHETIPATAWDVP
                     PLPANEPAPALYGPTPVHLAGTPNFYIVPTASAAILWRVDEARHTLVPWGQLPAFSS"
     gene            863..2059
                     /locus_tag="VHX39_35610"
     CDS             863..2059
                     /locus_tag="VHX39_35610"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEX3996527.1"
                     /translation="MDNPPFAHKRLLVVDDERVQQSLVSHAVTPMGYVVDTAANLHEA
                     QAHLSAHNYEAVVLDLSLGETEGISLFRALRDARSDPMLIFLSRLDERVITASLRLAA
                     GMGLRVAGMLQKPASPSALRALLHAAPPRSPRTAEPEPCKPSVAELANAVQHGIIVPH
                     FQPQVSLREGRVVGVEALARWPREHGQDAPPEVFVPLAEQSGLIIPLTFHIMRASLEA
                     CGRWRRRHPDCRVAVNISPLVLADPGLPDEIEQLLTETGVAPGGLIAEITESCVIANP
                     MLATEVLTRLRIKGIELSIDDFGTGHSSLLTLLRLPFSELKIDRSFISLCETDAEAWK
                     IVRATISMARELGLRVVAEGIETESIAQLLRQAGCEVAQGWHFARAMAEAELIPWLAG
                     YATVPA"
     gene            2056..>3242
                     /locus_tag="VHX39_35615"
     CDS             2056..>3242
                     /locus_tag="VHX39_35615"
                     /inference="COORDINATES: protein motif:HMM:NF024267.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HEX3996528.1"
                     /translation="MKRIAASIAGQALLLPCILAVIWGAVWIHLSAEYRRAIRDTIER
                     SATLSQTLAENMRRSAAVLDSALLNSRAIYLHDKDGFKIGPWMRGKADLMGVAVQMAI
                     ADASGIVVTASGDNGPPPANISDREHFRVQANASEDRLFISVPVIGRTTGRLSIQFTR
                     RMVNPDGSFAGVDVVSFDPFVISELQNGAQLNGGFTMLVGNDGIIRAAQPDTTLIGKT
                     FSDTGSLEKIRAAGNAPLVFGSQSDHAIVSYRTIAGYHLFVAAGFPESAVFASYDRER
                     EVVLLAGMLLSLTVFLVGAIMLHHRRKLTLFHQALLLTMDNISQAVLMIDQRRRMPVV
                     NRRVAQLLGLPEELARPGGSFDAMVEWQQKHGIATAIRDGTIDPNVPFYERTGADGSM
                     LEVR"
BASE COUNT          569 a         1022 c         1041 g          610 t
ORIGIN      
        1 ccgaactgaa tgccggcaat tgaccccacg gcaccagcgt gtggcgggcc tcgtcgacgc
       61 gccacaggat ggctgcactg gcggtcggca cgatgtagaa attcggtgtg cccgcgagat
      121 gaaccggtgt gggaccgtaa agcgccggag caggctcatt ggcgggcagt ggcggaacgt
      181 cccaggcggt ggccgggatc gtctcgtgtt tttcctgcgc aggcgatgac gtcaggtgaa
      241 ggccgacctc gacgacgccg accatcagca gcgccgccat gccaacccag acgacaatcg
      301 gcagatcgcg caggcgtgga tggcgagtgg gtggcgtcgc catggccgga aacggctttg
      361 cgccaatctc gccggggtca tccgtccctg gatcatacga cgccgcccgc gacggcggca
      421 cctgctgcgg ctgccgtgcc gagcggtcgt aggccgcccg ccgttggata tggatcagca
      481 cgtcgtaggc ctgcttcaac tccacaaaag cgctggcatt cccggtcacc ggcacatcgg
      541 gatgcaccag acgcgctttc cggcggtagg cggcggtaat cgcctcggat cgcgcgctcg
      601 gttcgacctc cagccgggca taatagcctt ccgggtccat gggcaggcgc aaggtctgtc
      661 ccagagggcg gcttgatggg ggcatggcgg cggccgggtt ccgtttgccg tttcggtcgg
      721 tgcggtcgag tacgcgattt tgtgtccgcg cgccacactt tcacgccggc ttcaatcggc
      781 gccgcatgcg agcgattcat cctttgttca tcttttcgtg ctgccatgcg cgccagacac
      841 atccgtcggt cagagacagc gcatggacaa tccgcccttc gcccataaac gcctgctcgt
      901 tgtggacgat gagcgcgtcc agcaaagcct ggtcagccac gcggtaacgc cgatgggtta
      961 cgtggtcgac accgccgcca acctgcatga ggcacaggcg cacctgtcgg cgcataacta
     1021 cgaggccgtc gtgcttgacc tctcgcttgg cgaaaccgag ggcatcagcc tgtttcgcgc
     1081 cctgcgcgat gccagaagcg atccgatgct gatcttcctc tcgcggcttg acgagcgtgt
     1141 gattaccgcc agcctgagac tggccgccgg catgggactg cgcgtggctg gcatgttgca
     1201 aaagcctgcc tcacccagtg cactgcgtgc gctgctgcac gcggcaccgc ctcggtcgcc
     1261 gcggaccgcc gaacctgaac catgcaagcc aagtgtcgcc gaactggcaa acgcagtgca
     1321 gcacggcatc atcgtgccgc atttccaacc gcaggtatcg ctgcgcgaag ggcgggtcgt
     1381 gggggtcgag gcgctcgccc gctggcccag agagcacggc caggacgcgc cgccggaagt
     1441 attcgtgccg ctggccgagc aatccggcct gatcatccca ctgacgtttc acatcatgcg
     1501 cgcgtcgctc gaggcgtgcg gccgttggcg gcgccggcac ccggattgcc gcgtcgcggt
     1561 gaacatctcc cccctggtgt tggccgaccc gggattgccg gatgagatcg agcagttgct
     1621 gaccgaaacc ggcgtcgcgc caggtgggct gatcgccgaa atcaccgaaa gctgtgtcat
     1681 tgccaacccg atgctcgcca ccgaagtgct gacccggttg cgcatcaagg gcatcgaact
     1741 ctcgatcgac gatttcggca ccgggcattc gtctttgctg accttgctgc ggttgccgtt
     1801 ctccgaacta aagatcgacc gctcgttcat ttcgctgtgc gaaaccgacg cggaagcctg
     1861 gaagatcgtg cgcgccacca tttcgatggc ccgagaactg ggcttgcggg tcgtcgccga
     1921 agggatcgaa accgagtcga tcgctcagtt gttgcgccag gccggctgcg aggtcgccca
     1981 gggatggcat tttgcgcggg caatggcgga ggcggagctg atcccctggc ttgccggata
     2041 tgccacggtg cccgcttgaa acgaatcgcc gcatcgatcg ccggccaggc gttgctgctg
     2101 ccgtgtattc tggcggtcat ctggggtgcc gtttggatcc acttgagtgc ggaataccgg
     2161 cgcgccatcc gggacaccat cgagcggtcg gcgaccttgt cgcagacgct cgcagaaaac
     2221 atgcggcggt ctgcggcggt actcgacagt gcgttgctca attcgcgggc catttacctg
     2281 cacgataaag atggtttcaa aattggcccc tggatgcgcg gcaaagccga tctgatgggc
     2341 gttgccgtgc aaatggccat cgccgacgca agcgggatcg ttgttaccgc ttcgggcgat
     2401 aacgggccgc cgccggccaa catttccgac cgcgaacatt tccgcgtcca ggccaacgcg
     2461 agcgaagacc ggctgttcat cagcgttccc gtgatcggcc gcaccactgg ccggctgtcg
     2521 atccagttca cccgccgtat ggtcaatccg gacggctcgt tcgccggtgt cgatgtcgta
     2581 tcgttcgacc cattcgtcat cagcgaactg cagaatggcg cacagctgaa tggcggcttc
     2641 acgatgctgg tcggcaacga cggcatcatt cgcgccgcgc aacctgacac aacgttgatc
     2701 ggcaaaacgt tctcggatac cggaagcctt gagaaaattc gcgctgcggg caatgcaccg
     2761 ctggtattcg gcagccaatc cgatcacgcc atcgtcagtt atcgaaccat cgccggctat
     2821 catctgttcg tggcggcggg gtttccggaa agcgcggtgt tcgcctccta cgaccgcgag
     2881 cgcgaggttg ttttgctggc cggcatgtta ctgtcgctga ccgtttttct ggtcggcgcg
     2941 atcatgctgc accatcgccg gaaactgacg ctgtttcacc aggccctgct gctgaccatg
     3001 gacaatatca gtcaggccgt actgatgatc gaccaacggc ggcgtatgcc agtggtgaac
     3061 cggcgggttg cgcaactgct cggtctaccg gaggaactgg cccgccccgg tggcagtttc
     3121 gatgccatgg tggaatggca gcagaagcat gggatcgcga ctgcgatcag agacggcacg
     3181 atcgacccaa atgtgccgtt ttacgagcgg accggcgccg atggcagcat gctggaagtc
     3241 cg
//
LOCUS       DATAVD010001869         9097 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_362017, whole genome shotgun sequence.
ACCESSION   DATAVD010001869 DATAVD010000000
VERSION     DATAVD010001869.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9097
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362017"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            179..264
                     /locus_tag="VHX39_35620"
     tRNA            179..264
                     /locus_tag="VHX39_35620"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:213..215,aa:Tyr,seq:gta)
     gene            complement(1658..3010)
                     /locus_tag="VHX39_35625"
     CDS             complement(1658..3010)
                     /locus_tag="VHX39_35625"
                     /inference="COORDINATES: protein motif:HMM:TIGR03025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolysaccharide biosynthesis polyprenyl
                     glycosylphosphotransferase"
                     /protein_id="HEX3996529.1"
                     /translation="MFLLTDLTAFALALTAAIIYMFAVQARIGDPGAELTRLAVETFG
                     VFLGVVICCGIQGHYQRRLSFGAEARQLVIVSAVALTGTGFVAFWTNFSLPRGPVALV
                     WIAFPVLALGLRETTRLALNALGLWQRRALVVGDDETTRCALAPLLSRLRLGYEITKV
                     VEPSVLETFYATKQLPQILERFDAHILILAADPTDWPRRAVLQTLIHARIPFVVMREM
                     DGLPVLGCEQTSFLSHDIVMMSYRNNLAKPVARLIKVGLDLVLASIGLVVLSPLLLII
                     AALVKLDGGPVLFAHKRIGSDGIAFRCLKFRTMVPNASQVLQELLERDPDAAEEWVNT
                     QKLRNDPRITRVGAWLRKASLDELPQLLNVLRLEMSLVGPRPIVEAEAAKYGDDFAFY
                     CETRPGITGLWQVSGRSDTTYAYRVQLDCWYVKNWTVWNDLAIIARTVPTVLTRRGAV
                     "
     gene            3593..4480
                     /locus_tag="VHX39_35630"
     CDS             3593..4480
                     /locus_tag="VHX39_35630"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3996530.1"
                     /translation="MPPLRIAVGIATCGRAAVLAETLAHVRQQTQRPHRIVICHTSDE
                     DVAGVEQYDGVELVRGRKGLPAQRNRIIEAVGDCDLLIFFDDDFLASPQYVAVACAVF
                     TADPTIVASTGMPIMDGVKGQGIDVTEARALIAADVQQRDPHAASDVMTAPHGYGCNL
                     AIRLTTARQHNILFDERLPLYGWSEDVDYTHRLKRYGRIVKLARARGVHLGTKLGRSP
                     GRRLGYSQVANPVYLWGTGSYSWGRALRSVGRNFVANFLRSFRPEPWIDRRGRLRGNA
                     LAFVDWTRGRMAPERILEL"
     gene            4477..5493
                     /locus_tag="VHX39_35635"
     CDS             4477..5493
                     /locus_tag="VHX39_35635"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3996531.1"
                     /translation="MTTCSAEPTATVAIPVYNSATTLADCLRSVMAQTLSDIEILVAD
                     DGSTDASAAVVLDFMRQDPRIRLLRMPDNGGKPRAMNRMADEARGKWFAVLDADDTYQ
                     PERLARLIEAADAAGVEMAADNLLYYDSGAGCAVQTAFEPTMAAWTATKADFLANSNP
                     FATFDFGILKPVMRREFLLRYRIRYQEDARLSEDFYYLMDFFVAGGRARIIAEPLYRW
                     TQPFGAVSRRWTETGSGPWRYDYRNALRTNQQFIAKMERSGEASMVAMLRERERKYIS
                     MIHYIDAQRAAAEHRILAAALGIISHPSTYGLLARRVVGRGVRALRRRVGRDQPIAAR
                     GAIQ"
     gene            5490..6446
                     /locus_tag="VHX39_35640"
     CDS             5490..6446
                     /locus_tag="VHX39_35640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996532.1"
                     /translation="MNHIAANRSDPRVLLVSASDQRFFNLLRGMLQTLQPESGSAQYD
                     VACFDIGMTESQREWLRAFPARIARPEAHFGIEAQRHNPALLSFLARPFLRDYFPGYD
                     IYVWVDSDLWFQDPTVLDRYIAGASALGFAITHESEHAYRFQPRLFGWTAKHFLLGYG
                     VLMGSWLLSRRHLNAGFFAAHADAPHWDAWANRYEAAINRTGSLVPHDQFALVQALHT
                     VAPEGSALPVTWLEPSCNWIVDRGPPMWNDTLGMFCKPYSPYEPIGVLHLAGPGKSSV
                     YDVRRTSGGLFQTRILPGATPAQPALLPVEVSPATDDVAAIA"
     gene            6529..6777
                     /locus_tag="VHX39_35645"
     CDS             6529..6777
                     /locus_tag="VHX39_35645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996533.1"
                     /translation="MANNTREEVTRSSECTDGGNGRDPVAMLRVVSQKEPLVPRVRAF
                     KLHAPFDRLRPARGFVLGFIIAIGLWLVIGLACWALFW"
     gene            6893..7516
                     /locus_tag="VHX39_35650"
     CDS             6893..7516
                     /locus_tag="VHX39_35650"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEX3996534.1"
                     /translation="MPPQLLTAIGLVESGRLDPAHHTLAPWPWSVDADGVGHYYASKQ
                     AAIAATTALEAAGSKSIDVGCMQINLQQHRSVFASLDEAFDPMANTKYAARFLESLYR
                     QTGSWPKAAAAYHSQTPGIGEAYREDVMARWPLASRYGGDIATAPATEKVDPYHVLTA
                     AFRAQLQGDALFRARRNAAMLIPAHAAPRPKKSRTARIASAERDVER"
     gene            7503..9017
                     /locus_tag="VHX39_35655"
     CDS             7503..9017
                     /locus_tag="VHX39_35655"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HEX3996535.1"
                     /translation="MSNAELTSHRLDADADAATLKHRSVRGAALTFGAQGFRIVTQFG
                     SQIAMAHLLLPTAFGLIAMIMPVLSLVQIFNELGLTQATVQRNEITFRDLSTLFWINL
                     VVSGGLAVLLALLAPLVAWFYLEPRLTAVTICAASLLLLSGLSAQQIALMNRKMQFVR
                     LAVIDTSCALAAAITGIAAALLGFGYWSLVLMQAANALTIVVLAWALSDWRPHWRPQF
                     GGAKALIRFGGHLTAFNVLGYAENNLGNILLGRFDGPFALGLYDRAFKLVIVPWWQVS
                     LSVARVATALLSRLRESDELYIRAFNQMLQGLLLVAVPGLIWAAANADRLVPMVIGRN
                     WIAAAPIVSDLSLAATLLPFSASAYWLYVSQGRVAEQLRWGCVSAAAVIVALLTGISW
                     GPVGVARSYAAFAIIIQGVQIWGATRRGPVTLRGVLYATYPVFLGAALSAIAMWAAQQ
                     GLTSLGVGAIPSLALSLLVSYLACAASLACFPAGIRILQDTWSLRTSLLRAPAG"
BASE COUNT         1751 a         2725 c         2742 g         1879 t
ORIGIN      
        1 tggatgctca tcctggcgcg gtcttatggt taggtgtgga tgaacgttgt cccggagcgg
       61 tttttgttgg gatgagaggt gcggggaaaa cggcggtgtg gtcaagggcg tttcggcggc
      121 tgcgaacgtc cgcgttgaca ggagtggggg tttggcttta gtccccgctt cccggttcgg
      181 aggggtgccc gagtggctaa agggggcgga ctgtaaatcc gctggcgtgc gcctacgttg
      241 gttcgaatcc aaccccctcc accaaatcca cactaatggc ttgatgcgcc gggaaattcc
      301 gacaaatcaa tggaccaggg gtgtctctgg tgacacatcg aggtcgtcca aatgccattg
      361 gccgtgatcc gttcctacaa gcacactaag accgacgttt actggttccg gaaagtgatc
      421 ccgtccgact tcgggcggcc gtaggcaggc gggaacgctc cggctggggt gactgcctaa
      481 ctctcaggga aatcaccgcg gttgcgccag agtggtatcg aatggcgctt ctggaatggg
      541 aggatgatcc ggacaaattc ggcgacctcg acctctaaga ggttctctta cacggccaag
      601 atcggcgtgc cggcgtaacc gatgcggccg caacacatgg cggcacgggg tgcccaccgt
      661 ccgggagatg cgcgtcacga cgtccatcgc ctcgcgcaac agtggcaatt cgttgcgatt
      721 gctcggcgcc gtcacgaacg gcgcgatcac gttacgatgg cggccgcaga aggcgacgac
      781 ttgatccccc cttcacccgc ttgtggtcgc tgaatccgcg tttatcgccg cccctttttg
      841 ccgccgtggt cgtgccgtcg ccatcaatga ccgccgtgtc gaggcggccg tcctcacgaa
      901 gcctctctac cgaagcgatg aaaattgcat ccgcgcagcc catgtcgacc caccgccgcc
      961 agatgccaaa tacatgtgta gcgggttgtc ggcttaccgt catcattctt gtcgatcggc
     1021 agctccttcc cctgacagct caaatgcagg atcttcgaaa cgcaattgaa ttatcttata
     1081 gagtctcagc ttccgtgcca gttcgcggct accgaggaca cggagcgaca agacaaattg
     1141 ctccaattcc ctcagctcca atcgcatcgg aatcgcttgc caacgctgcg ttccgccatt
     1201 cgggttcccc caagggctga accctacccg aggcggcggc atcggcggag gccccaaaat
     1261 caaggccggt tatcgccaaa tccgaccgtc ttcgaaaact cgcaaccagt tgcaggtaaa
     1321 catcatgaat tgtttgtcac cgcccgtcag cttcgaatgt ctaacaactc caagaagcca
     1381 acctcgcgat cgaacgtacc cgaatacggc caccggaaga attgcatcca tgaagaagtt
     1441 cgtggtctca gtttcttgtt gtatcagctc tcgccagcgg ccttgcgtat gctggtagca
     1501 atggagcgga tgcccgtgcc ccattcacaa ggcttgtcgc atcaaaaaat tttcataaca
     1561 tatacaaagc gaaatccccg ctcccgggac ttgcccgtag attctgttcc tttcgcaggg
     1621 catcgaaacg agaggagcaa aagcggttgc tcagccgcta gactgcgccc cgtcgcgtca
     1681 gcacagtcgg taccgttctc gcgatgatcg ccagatcgtt ccagactgtc caattcttca
     1741 cataccagca gtccagttgg acgcggtatg cgtaggtggt atcgcttcga ccactgactt
     1801 gccacaatcc tgtgatgcca ggacgagttt cgcagtagaa ggcaaagtcg tcgccatatt
     1861 tcgcggcttc ggcttcgacg atcgggcgcg gtccgaccag actcatctcg agccgtagca
     1921 cattcagaag ttgaggcagc tcatccaggc tggccttgcg cagccacgca cccacacgcg
     1981 taattcgggg atcattgcgc aatttttgcg tgttgaccca ttcctcggcc gcgtcaggat
     2041 ctcgctccag caattcctgc aggacctgac tggcgtttgg caccatcgtg cggaatttaa
     2101 ggcatcggaa tgcgatgccg tccgagccga tgcgtttatg ggcgaacaac accgggccgc
     2161 catccagctt gacgagggcg gcgatgatca gcagcaacgg cgacaggacc acaagtccga
     2221 tcgaagccag caccaggtcg agcccgacct tgataagacg ggcgaccggc ttggccaaat
     2281 tattccgata cgacatcatg acgatatcat ggctgaggaa cgacgtctgt tcgcagccca
     2341 gcaccggaag gccgtccatt tcccgcatga ccacaaacgg aatgcgagcg tgaatcagcg
     2401 tctggagcac cgcccgacgc ggccaatcgg tcgggtcggc ggcaaggatc aggatatggg
     2461 catcaaagcg ttccaatatc tggggaagct gctttgttgc ataaaacgtc tcgagcacgc
     2521 ttggctcaac aaccttggtt atctcgtagc cgaggcgaag ccgagacagc agcggggcga
     2581 gagcacatcg ggtcgtttcg tcgtcgccga ccaccagcgc ccgtcgctgc cacagcccaa
     2641 gcgcgttgag cgcaagcctc gtagtctccc gtaagcccag ggccaagact ggaaaggcga
     2701 tccacaccaa ggcaactgga ccgcggggca atgagaagtt ggtccagaac gcgacaaagc
     2761 ccgtccctgt aagcgctacg gcgctcacga tgacaagctg tctcgcctcc gccccaaatg
     2821 aaaggcggcg ttgataatgg ccctgaattc cacagcagat cacgacgcca aggaatacgc
     2881 caaaggtctc taccgcgagt cgggttagct cggcccccgg gtcaccaatg cgtgcctgaa
     2941 ccgcaaacat gtagatgata gcggcagtga gcgcgagcgc gaacgccgtc agatcggtca
     3001 gcaggaacaa actcgcccga gttatatccc cttcgtaact taatgcgggg cctctgtata
     3061 ccgtcctaga aggcccccgt atgtagggca tgactccgac atcgcgtgcc accgcctcat
     3121 gcatccaacg attcgtcgtt gccattaagg tttgttccgg tcagtgaatg ggttgttgag
     3181 tgactggtgt aggaggccaa ccgtgaccga tcggcgcttt tctttcctgg acctcagcac
     3241 atcgtcttgc ctgccgtcat agctagtgcc tgtataatcg cggaagcaac tcgcaactgc
     3301 gtgcgggggg gaaggacggt agtcacattc ttgtaagccg ctccgatggc atcaggctgc
     3361 cagtattacg gtcaaaatat ggcggaagtt tcctaacaat ttcttaagat gcacgatgtg
     3421 aagatgacca tcgacacaaa gaacctgccg tgtgggcctc aattctcttg cgctgacgtg
     3481 acgatggata gttctaacgc agagtttact tggcctgcgg tgtccaatgg ctgctagacc
     3541 gcacaagtcc gacctttcga aaaaaccgcg ccacagacat agaggagtaa ccatgcctcc
     3601 gcttcgaatt gccgtgggca ttgcgacttg tgggcgtgcc gctgtgctgg cggagacgct
     3661 tgcgcacgta cggcagcaga cacagcggcc gcatcggatc gtgatttgcc acacatccga
     3721 cgaagacgtt gctggtgtgg agcaatatga cggcgttgag ttggtgcggg ggcgcaaggg
     3781 attgccagcc cagcgaaacc gtatcatcga agcggtcggc gactgcgatc tgctcatatt
     3841 ttttgatgat gatttcctgg cttccccgca atatgttgcg gttgcatgcg ccgtcttcac
     3901 ggcggaccca acgatcgtcg catcgactgg catgccgatc atggacggag tcaaaggaca
     3961 gggcatcgat gtgacggagg cgcgagcttt gatcgcggct gatgtacaac agcgcgatcc
     4021 gcacgccgca tccgatgtga tgacggcgcc gcacggctat ggttgcaact tggcaatccg
     4081 gctcacaacc gctcggcagc acaatatatt gtttgatgag cgcttaccgt tgtacggatg
     4141 gtcggaagac gtcgactata cgcatcgtct caagcgctac ggtcgaatcg tcaagctcgc
     4201 gcgcgcgcgc ggcgtgcatc ttggcaccaa gcttgggcgg tcgccgggac ggcgactcgg
     4261 ctactcgcag gttgccaatc ctgtctacct atggggaact ggtagctata gctggggccg
     4321 agcgctgcgt agcgtgggac gaaatttcgt tgcaaatttc ctcaggtcgt tccggccgga
     4381 accgtggatc gaccgtcgcg ggcggcttcg cggcaatgca ctcgcctttg tcgactggac
     4441 acgtggccgc atggcgccgg aacggatttt ggaactgtga ccacatgttc agccgaaccg
     4501 acggcaaccg ttgccattcc tgtctacaac agcgcgacga ccttggcgga ctgtcttcgc
     4561 tcggtcatgg cgcagacttt gagcgatata gaaatcctgg tggcggacga cggctccacg
     4621 gatgcaagcg ccgcggttgt gctggacttc atgcggcaag accctcggat acgcctgctg
     4681 cgcatgcctg ataacggcgg caaaccacgc gccatgaacc gaatggccga tgaggcacgt
     4741 ggcaaatggt ttgcggtact ggatgcggac gacacctatc agccggaacg gctggcacga
     4801 ttgatcgagg cggccgatgc cgcgggtgtc gagatggcgg cggacaacct tctctactac
     4861 gactcgggcg ccggctgtgc cgtgcagacg gctttcgaac cgaccatggc ggcctggaca
     4921 gccaccaaag cggatttcct ggcgaactca aatccgttcg caacgttcga cttcggtatt
     4981 ctgaagccag tcatgcggcg cgaatttctg ttgcggtata ggattcgtta ccaagaagat
     5041 gcgcggctgt cagaggactt ctattatctg atggatttct tcgtagcggg cggccgtgct
     5101 cgcatcatcg ccgaaccact ttatcgttgg acgcagccgt tcggcgccgt ctcccggcgc
     5161 tggaccgaga ccggcagtgg tccgtggcga tatgattacc gcaatgcatt gcggaccaac
     5221 cagcaattca ttgcaaagat ggagcgtagc ggcgaggcga gcatggtcgc gatgctgcgc
     5281 gaacgcgaac ggaaatatat cagcatgatt cactacatcg atgcacagcg tgcggccgcg
     5341 gaacacagga tcctcgccgc ggcgctcggc atcatctcgc acccttcgac ctatggtctt
     5401 ctggcgcggc gcgtcgtcgg ccgcggcgtc cgggcgctgc gaagacgagt aggacgtgat
     5461 cagccgattg ccgcacgagg tgccatacaa tgaaccatat cgcggccaac aggagcgacc
     5521 cgcgtgtcct gctcgtcagt gcgagcgacc agcgattctt caacctgctg cgcgggatgt
     5581 tgcagacatt gcaaccggaa tccggatccg cgcaatatga tgtagcctgt tttgatatcg
     5641 gcatgacgga gtcgcaacgc gaatggctgc gcgcgttccc cgcgcggatt gcccggccag
     5701 aggcgcattt cggcattgag gctcagcgcc acaatcccgc gcttctgtcg ttcctcgctc
     5761 ggccatttct gcgcgactat tttcccggat acgacatcta cgtatgggtc gattcggatc
     5821 tgtggtttca ggatccaacg gtgctcgatc gctacattgc gggtgcgtcg gctcttggct
     5881 tcgcgatcac gcatgagtcg gagcacgcct atcgctttca gccgcgcctg tttggctgga
     5941 ccgcaaagca ttttctcctc ggctatggcg tgttgatggg tagctggctg ctgagtcgcc
     6001 gccacctgaa tgccgggttc tttgctgccc acgctgacgc accgcactgg gacgcttggg
     6061 ccaaccgcta cgaggccgca atcaaccgca ccggctcgct tgtaccacat gatcagtttg
     6121 ccctggtgca ggcgctgcat accgtagcgc ctgagggcag cgctctgccg gtaacgtggc
     6181 tcgagccaag ctgcaactgg atcgtcgatc ggggtccgcc gatgtggaac gacacactcg
     6241 gtatgttttg caagccatac tcgccctatg agccaatcgg cgtattgcat ctcgccgggc
     6301 cgggcaaaag cagcgtctat gacgtgcgtc gcaccagcgg cggcttgttc cagacccgca
     6361 tcctgccggg agccactccg gcccagccgg cactgctgcc cgtcgaggtc agtccagcca
     6421 ctgacgatgt tgcggcgata gcctgatggc tacaacgttc ggcacgagaa aattgcgcac
     6481 acaggtcgat tgtgcgatcg tcttgccaca acgacgatca agcgaaccat ggcgaacaac
     6541 acccgcgagg aggttacacg tagtagcgaa tgcacggatg gcgggaatgg ccgcgatccg
     6601 gtggcaatgt tgcgcgtcgt gtcacagaaa gagccgttgg ttcctcgggt ccgtgcattc
     6661 aaacttcacg cgccttttga tcgcttgcgt cctgcgcgcg ggtttgtgct gggtttcatc
     6721 attgcaatcg gcttgtggct ggtcatcggc ctcgcgtgct gggcgttgtt ctggtagcgg
     6781 acggtatctc tgctggctgc ttgcgctgac ggccccagca agctgtttcg ccgcgacgcc
     6841 ggatgccgcc gcctgcaccg ccgccagtgt cgtggtggag caccaggccc aagtgccacc
     6901 gcaactgctg acggctatcg ggctggtgga gagcggcagg cttgatccgg cacatcatac
     6961 tctggctccc tggccatggt cagtggatgc cgatggcgtc ggccactact atgcgagcaa
     7021 gcaggccgcc attgccgcca ccacggcgct tgaagcggcg ggaagcaaat ccatcgacgt
     7081 ggggtgcatg cagataaacc tgcaacaaca ccgttccgtg ttcgcctcgc ttgacgaggc
     7141 gttcgacccg atggccaaca cgaagtacgc cgctcgtttc ctggagtcgc tctatcggca
     7201 gaccggaagc tggccaaaag cggccgcggc ctatcattcg caaacgcctg gaatcggcga
     7261 agcttaccgc gaggatgtca tggcgcggtg gccattggcc agccgttacg gtggggacat
     7321 cgccacggcc cccgcgacgg aaaaggttga tccataccac gtcctgaccg ccgcgttccg
     7381 agcgcaactt cagggggacg ccctgttccg tgcgcggcgc aacgccgcga tgctgattcc
     7441 ggcccatgct gctccgcgac ccaaaaagtc acgcactgca cggatcgcca gtgccgagcg
     7501 cgatgtcgaa cgctgagctg acatcgcatc ggctggacgc cgatgccgat gccgcgaccc
     7561 tgaagcaccg gtcggtgcgt ggggccgcgc tgacgttcgg cgcgcaggga ttccgcatcg
     7621 tcacacagtt cggctcgcag atcgcgatgg cccacctgct gttgccaacg gcgttcgggc
     7681 tgatcgctat gatcatgccg gtcctaagcc tggtgcagat cttcaatgaa ctaggtctca
     7741 cgcaggcgac cgtgcagcgc aacgagatca cgtttcgtga cctgtcgacc ttgttctgga
     7801 tcaaccttgt cgtcagcggc gggctggcag tgctgcttgc cctcctcgcc ccgctggtgg
     7861 cctggttcta tctggagccg cgccttaccg ccgtgacgat ttgcgcggcc agcctgctgc
     7921 tgctcagcgg tttatcagcg cagcagatcg cgctgatgaa cagaaagatg cagtttgtca
     7981 ggctggcggt gatcgacacc tcgtgcgcgt tggccgcggc catcaccggc attgccgcgg
     8041 cgctgctcgg gtttggctac tggtcactcg tgctgatgca ggcggcgaat gcactgacga
     8101 tcgttgtcct ggcctgggcc ctgtccgact ggcggccaca ctggcgaccc caatttggcg
     8161 gcgccaaagc cttgattcgg tttggcggtc atctgacggc gttcaacgtc cttggttacg
     8221 cggaaaacaa tctcggcaat atcctgttgg gccgcttcga cggccccttt gccctgggac
     8281 tctacgaccg agccttcaaa ttggtgatcg tgccgtggtg gcaagtgagc ctgtcggtcg
     8341 cgcgcgtcgc cacggcattg ctgtcgcggc tgcgcgagtc cgacgaattg tatattcgtg
     8401 ccttcaacca gatgttgcag gggctgctgc tggtggcagt tccgggcctg atctgggccg
     8461 cggcgaacgc ggaccggctg gtgccgatgg tgatcgggcg gaactggatc gccgccgcac
     8521 caatcgtcag tgacctgtcg ctcgccgcga ctctgctgcc gttttccgcg agtgcttatt
     8581 ggctgtatgt cagccaggga cgagtcgcgg agcaactgcg gtggggatgt gtcagcgccg
     8641 cagcggtgat cgttgcgttg cttaccggta tttcgtgggg ccctgttggc gtggcacgtt
     8701 cctatgccgc attcgccatc atcatccagg gcgtgcagat ctggggtgcc accaggcggg
     8761 gcccagtcac actgcgtggt gtgctgtatg ccacatatcc ggtgttcctc ggcgccgcat
     8821 tgtccgccat cgcgatgtgg gctgctcaac aaggcctgac gagcctcggt gtgggggcca
     8881 ttccctccct ggccctctca ctgctggtct cctatctggc ttgtgccgca agccttgcgt
     8941 gtttccccgc aggcatccgc atcctgcaag atacatggtc tcttcggacc agcctgttgc
     9001 gtgcacctgc cggttagccg gcaaggcaaa atggttgtcg tcaggctgaa cgcttacgtg
     9061 gcgcggatca aaagtgccgc tcgtagatct tcagcac
//
LOCUS       DATAVD010001870         1729 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3527627, whole genome shotgun sequence.
ACCESSION   DATAVD010001870 DATAVD010000000
VERSION     DATAVD010001870.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1729
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3527627"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(127..1158)
                     /locus_tag="VHX39_35660"
     CDS             complement(127..1158)
                     /locus_tag="VHX39_35660"
                     /inference="COORDINATES: protein motif:HMM:NF015558.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative sulfate exporter family transporter"
                     /protein_id="HEX3996536.1"
                     /translation="MTGLEAAPEARAKTLWASSRVLGPGLAATIVVALASTYLSDHYR
                     APPVIFALLLGMALNTLSEEPRYRPGIDFSARMLLRISVALLGLRITFAQVGELGWST
                     AAMVLITVPLTIAFGLLLARMLKLDNRFGVLSGGAVAICGASAAMAIAVAWPRKDSER
                     DTVVVIAAITTFSTIAMVLYPALLGHLNLDATQTGRILGGSIHDVAQVVAAGYATSQR
                     AGDSATIVKLMRVAMLLPVVLALTLKKAGRAHDSTAGGHKVALIPGFLVAFVILTALN
                     GFNLVPKPLALDLAEVSKWLLVVAVAALGMKTNARDLVAVGRSALVLIAAETVFLGLA
                     VVGWVALLG"
BASE COUNT          354 a          553 c          530 g          292 t
ORIGIN      
        1 gtgtggaagc ggcagccgaa caatgtagcc ccggcagtca gttcgtacgg gaacgcggcg
       61 atagtctatc cggaacgggc cgcgctaccc tagtagcgct acccatcaga ccagcagcgc
      121 tacccatcag cctagcagcg ccacccatcc caccaccgcc agccccaaaa acaccgtctc
      181 cgccgcaatc agcacgagcg ccgagcgccc cacggcgacg agatcgcgag catttgtttt
      241 catgcccaaa gccgcgaccg caacgaccaa cagccatttt gagacttccg ccaggtccag
      301 cgccaggggt ttcgggacca ggttaaaacc gttcaatgcc gtgaggatga caaaggcgac
      361 caggaaccct gggatcagcg caactttgtg gccgccggcg gtgctgtcgt gagcgcgtcc
      421 ggcttttttc aaggtgagtg ccagcaccac cggcagaagc atcgcgacgc gcatgagctt
      481 cacgatcgtg gccgaatcgc cggcgcgctg cgacgtcgcg tatccggctg cgacgacttg
      541 cgcgacgtca tgaatcgagc cgccgagaat ccggccggtc tgcgtcgcgt cgagattcaa
      601 atgaccgagc agggcggggt agagaaccat ggcaatggtg ctgaaggtgg taatggcggc
      661 gatcaccacg accgtatccc gctccgagtc cttacgaggc caagccaccg caatggccat
      721 cgccgccgat gcaccgcaaa tggccactgc cccgccagac agtacgccga agcggttgtc
      781 gagtttcaac atccgcgcaa gcagcagacc gaaggcaatc gtcagcggca ccgtaatcaa
      841 caccatcgcc gccgtcgacc accccagctc accgacctgt gcaaaggtga tgcgtaaccc
      901 gagcaatgcg acgctgatcc gcagcagcat gcgggcggaa aagtcgatgc ccgggcgata
      961 acgcggctct tccgagaggg tgttgagcgc catgcccaac agcagtgcga atatgactgg
     1021 cggcgcccgg taatgatccg acaggtaggt cgaagcgagc gccacgacaa ttgtcgccgc
     1081 caggcccggg ccgaggaccc gactcgaggc ccagagtgtt ttagcacgag cttccggggc
     1141 cgcttcgagc ccggtcatgt gagcgatgca gccggcggtg tgtgcaaact catcacattg
     1201 gtagcgacgg aggacctgga gtgtactagc ccatcgcgcc gttggccaaa ccgccgactg
     1261 tgcgtgcatc gcagttctgt gtaacggcga gctatcgcag ctcccgtgct gccgaccgcc
     1321 ctggcgctag acatcacccg gatggagtaa gtagcgccca agggacgcag actttactag
     1381 atgtttctct ctctctctcg ggtcgaccgc aggcgctagg cagtgagctg agcacgcgac
     1441 tttcagtgtc gggcgcgctg catcaggctc tcggcatcgg gtgcctctat cccagacgcc
     1501 cttggccaaa acgtcgaccc gtcgcgtagg gtgtgctgga atccatagcg ctcgacatct
     1561 ccccggatgc gggtgggtgg cgtcattaca cgggcgaggt caggcgctgc gatagagctt
     1621 cgtcatgacg aactcacggt gtccgagagc ttcagcggcc gtgaatcggc cgttggccgt
     1681 tcttgcgatg cagtcgatca tgagatcgcc cgcttgctcg atggtcatt
//
LOCUS       DATAVD010001871         3610 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_180608, whole genome shotgun sequence.
ACCESSION   DATAVD010001871 DATAVD010000000
VERSION     DATAVD010001871.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3610
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180608"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..803
                     /locus_tag="VHX39_35665"
     CDS             <1..803
                     /locus_tag="VHX39_35665"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEX3996537.1"
                     /translation="FRLYPMYLCIVLAQTLAMLLLLPAGPFSEPADTLRYVAANAVLA
                     NFLQYDICGVLDGLRNPGINPSLWTLKIEIGFYLIVPAIYVATQRWGPRVLVAIFAGS
                     VAYAVILRHRGDPRLAQQLPGQLQFFVTGMALWLYGRRLRVNVWFSGLIAAVFFTAWS
                     LVHPVPDGIRPLLVAAFVHSFALSTPPLRLRTDLSYSVYLIHGPLLQILIQLGVFHDT
                     PVWIGTIVVLVLGLAAVTERLIERPGTEFGRRLSARLTRRSAVVVQRA"
     gene            815..2209
                     /locus_tag="VHX39_35670"
     CDS             815..2209
                     /locus_tag="VHX39_35670"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3996538.1"
                     /translation="MAIESVVVLNDFCHAQGGASRVAISEAIALRALGVQVQFLGAVG
                     PVCEELLDSGVRVVCLEQPALADAKTEPRAALTAMWNHTAYRTLRRVLASVDRHRSIV
                     HLHGYTKALSTAPVTAARRAGFATICTLHDFFAACPNGAFFNYRQQSPCQLRALSAAC
                     MVSACDKRHAVHKAYRVVRGAVQRGMARFPSGVGHYVSLSDRSAALLRPYLPADAQLY
                     PLTNIIDVQRQPAIDPAANRNLMVVGRLDQEKGVLLAARAAAAAQLPIVFVGDGPYRA
                     QIEATGARVTGWLSAAEVYRELNTARCLVFPSLWYETFGLVVAEAAARGVPAIVSDIS
                     APADRISDGVDGWLFRAGDLAELTEVMLLARDDAVIRTAGNAAYQAYWAAPADPDSHA
                     TALLSIYANVLTASVAACAHNTASVRVSAASSSRRQSTNRTPFVSATACAIISDEPNQ
                     PTASQCCSNGRSSR"
     gene            complement(2756..3391)
                     /locus_tag="VHX39_35675"
     CDS             complement(2756..3391)
                     /locus_tag="VHX39_35675"
                     /inference="COORDINATES: protein motif:HMM:NF012383.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HEX3996539.1"
                     /translation="MNFVQPSVPSAPVKTGTLPTRTLRQPAFNAACAELIMQVEDDYA
                     PAFLVGVRTGGFVVAETMARVASFRVMPLTCRRPTTALKSLVPGLKPLLSALPEPLLN
                     ALRRVEHRAATGHRRAEGTTQIDLAEAAAIADRLRKLGRSPRVLVVDDAVDSGVTLAT
                     VLRTLRELCPPTAELRTAVITVTTEDPVVDPDYALYRGVLCRFPWSFDARG"
BASE COUNT          640 a         1131 c         1133 g          706 t
ORIGIN      
        1 tctttcgctt gtatccgatg tatttgtgca tcgtgctggc gcagacgctt gccatgctgc
       61 tgctgttgcc cgccggaccg ttcagcgagc ccgccgacac gttacgttac gtcgcagcaa
      121 atgcggtact ggcgaatttc cttcagtacg acatttgcgg ggtgctcgat ggactgcgca
      181 atcccggaat caatcccagt ctgtggacgt taaaaatcga aatcggcttt tatctcattg
      241 tcccggcgat ttatgtcgcg acgcaacgct ggggaccgcg ggtcctggtg gcaatctttg
      301 ccggttcggt cgcgtatgcc gtcatcctgc ggcatcgcgg cgatccccgc ctcgcacaac
      361 agctgcctgg ccagttgcag tttttcgtca ccggcatggc gctctggctg tacggccggc
      421 gactgcgcgt gaacgtttgg ttctccggat tgatcgccgc ggtctttttt accgcctgga
      481 gcctggtgca tcccgttcca gacggcatcc gcccgctgct cgtggctgca tttgtgcaca
      541 gtttcgcgtt gagcacgccg ccattgcggc tgcgcaccga cctgtcgtac agtgtctatc
      601 tgattcacgg cccgctgttg cagatcctga tccagctcgg ggtgttccac gacacgccgg
      661 tctggatcgg cacgatcgtt gtcctggttt tgggtctggc cgcagtcacc gaacgcctga
      721 ttgaacgtcc cggcaccgaa tttggccgca gactttctgc acggctgaca cggcgcagtg
      781 ccgtcgtcgt gcaacgcgcg tgaccgagcg tcccatggca atcgaatcgg tcgtcgtact
      841 caacgacttc tgccacgcac aaggtggtgc gagccgggtg gcaatcagcg aagccattgc
      901 gttacgggct ttgggcgtgc aggtgcagtt tcttggcgcc gtgggtccgg tctgtgagga
      961 attgttggac agcggcgttc gcgtggtctg tctggaacag ccggcactgg cggatgccaa
     1021 aacggaaccg cgggccgcgc tcaccgcgat gtggaatcac accgcgtatc ggacgctgcg
     1081 ccgggtattg gcatcagtcg atcgtcatcg ctcgatcgtg catctgcatg gctacaccaa
     1141 agcgttgagc accgctccgg tgacggcagc gcggcgcgcc gggttcgcca ccatttgcac
     1201 cctgcacgac ttcttcgcgg cctgcccgaa cggcgccttc ttcaattacc ggcaacaatc
     1261 gccgtgccaa ttgcgagcgt tatcggctgc ctgcatggtc tcggcctgcg acaaacggca
     1321 cgccgtgcac aaggcgtatc gggtcgtgcg cggcgccgta cagcgcggca tggcacggtt
     1381 tccttccggc gtcggtcatt acgtttcgtt gtcagatcgt tccgcagcgc tgttgcggcc
     1441 atacctgcct gccgatgcac agctttatcc gctgaccaac atcatcgatg tgcaacgtca
     1501 gccggcgatc gatcctgccg ccaatcgtaa cctgatggtg gtcggccgat tggatcagga
     1561 aaagggcgtt ctgctggccg cacgtgctgc agcggcagcg cagttgccga tcgtgttcgt
     1621 cggtgacggg ccgtatcgcg ctcagatcga agccaccgga gctcgcgtta ccggctggtt
     1681 gtccgcggcc gaggtatatc gcgaactcaa cacagccaga tgtctggtgt ttccgagcct
     1741 ctggtacgaa acgtttggcc tcgtcgtggc cgaggccgcc gcgcgcggtg tgccggcaat
     1801 cgtcagcgat atttccgcgc cggccgatcg tatcagtgat ggcgtggacg gttggctgtt
     1861 tcgcgccggc gacctggccg agctgaccga ggttatgttg ctggcccgcg atgatgccgt
     1921 gatacggacc gcgggaaacg ctgcgtatca ggcgtactgg gctgctccgg cggatccgga
     1981 ctcgcatgcc accgctttgc tgtcgattta tgccaacgtc ttaaccgcga gcgttgcggc
     2041 atgtgcccac aacacagcaa gcgtgcgcgt cagtgccgcc tcatccagcc ggcgacaatc
     2101 gacaaaccgc acgccgttcg tttcggcgac cgcctgtgcc atcatctcgg acgagccaaa
     2161 ccagccgacc gcatcgcaat gctgcagcaa cggcaggtcg tcgaggtgat cggtcagcat
     2221 cacgcgtggc cgctcggccc attgccggtc ggccagaaac tcttgtaccc ggcggagttt
     2281 ttccgcaccg tgattcaaaa cgccatccgg tggcaagcgg catggcgtgg caagcacatg
     2341 gcgaaaaccg agttgcacac ccaatgggcg ggcgtattcg gcggcggcgg cagtggcgag
     2401 gacggcatcg atttcgctac tggcgatctg ctgcaagaca ggctcgaccg caggccgcac
     2461 catccgtcgc aaccgcgaag gcatccgatc cgctgcgctg gccgcggcac cgtcgttcgc
     2521 acgatgccat gcgttttgca cgccgcgcat cagccgcgca tggtcgatcc ggccaaggcg
     2581 gcggtgcagc aacagttttt gcacccgcag ggacagcatc atgcgggccg gcagaccagg
     2641 ctccggcaac cacccgaaca tgagatgcat gatccacagc ggaaagctgt tgccacacaa
     2701 gatcgttccg tcaaggtcgc aaatcagcac aggcgaggta tcgcccggtg ccggatcacc
     2761 cccgcgcatc aaacgaccag gggaaccggc agaggacacc gcgatacagc gcgtagtccg
     2821 gatcaacgac cggatcctcc gtcgtgacgg ttatgaccgc cgtacgcaat tcggctgtgg
     2881 gcgggcaaag ttcgcgcaac gttcgaagca cggttgccag ggtgacaccg ctgtccaccg
     2941 catcgtcgac caccagcaca cgggggctgc ggcccagttt gcggagtcgg tcggcgattg
     3001 cggcggcttc ggcaaggtcg atctgggttg tcccctcggc gcggcgatgg cccgtagccg
     3061 cacgatgctc gacgcgtcgc aacgcattca acagcggctc cggcaacgcc gagagcaggg
     3121 gtttcaagcc cggaacgagc gatttgagag cagtggtggg ccgccggcag gtgagcggca
     3181 tcacccgaaa cgaagccacg cgggccatgg tctcggccac cacaaatcct ccggtgcgca
     3241 cgccaaccag aaacgcgggc gcgtagtcgt cttcgacctg catgatgagc tcggcacagg
     3301 cggcgttgaa cgcaggctgg cgaagcgtcc gggtcggcag ggttccggtt ttgaccgggg
     3361 ccgacgggac agaaggttgt acaaagttca cggcatctcc cggatcgatg gccgcgtcgc
     3421 atgcggactg cgaataccgg agcaagagcg gtgccacggt acccaacccc aatatccggg
     3481 aggattcgcc agcaatatcg atgcctggga ccttcggtat aagcgtgacc aggactggac
     3541 ctgttacagg tcacgtaaac cctgcgtaaa ccttggcggg tcatcgacgg tgatgattta
     3601 aactttcctc
//
LOCUS       DATAVD010001872         2361 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2600414, whole genome shotgun sequence.
ACCESSION   DATAVD010001872 DATAVD010000000
VERSION     DATAVD010001872.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2361)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2361)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2361
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2600414"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..953
                     /locus_tag="VHX39_35680"
     CDS             <1..953
                     /locus_tag="VHX39_35680"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX3996540.1"
                     /translation="AWSTQVMNPRRSANMFAVDGRDTWLIHNYLRESETDFDAIDADW
                     CIRTIMGVDAAFHYDVITRENWIGRRLLADRFRDRRAFICGDAAHLWVPSAGFGMNAG
                     IADAMNLSWMLAGVLHGWADPAILAAHEAERWPITEQVSKYAMSTSLSVARTRAEVPE
                     DIETNAATQIEFGLAMQKMHTPQFCCGGLNFGYFYQHSPIIEYDGEIAPPYTMDQFTP
                     ATVPGCRTPHIWLDGGRSLYDAMGPDFCLLRFDRSVDVRRLVDAAAFRKFPLRVLDVV
                     PTEVHRHKLLLSRPDQHVAWRGNSVPDNPLPLVDKVRGAA"
     gene            complement(937..1980)
                     /locus_tag="VHX39_35685"
     CDS             complement(937..1980)
                     /locus_tag="VHX39_35685"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3996541.1"
                     /translation="MRVSNFLFPQSSTAADDAQVIDETLREAKLTDELGFDVIWLAEH
                     HFDGICAYVDPISFAAALATATQQAKIGFAVAQMALHHPIRMAEQISLIDHLSKGRLI
                     VGLGRGTAYNIYDYQGFGIDHTQAQERFEEAEAIMFEAWKGEAFEHHGEFFNLRLPAF
                     RPVPYTKPHPYVIRAAATEHGMLDIARRGRPFMMNVQSNATTLQRMELYRQTLRSIGQ
                     DEATIATNVDQCWAWRNVFVAETDGEAERIAVPAFHAMHAHRVAMRERVYREQGVSIV
                     PMPAPGTAPPARMVLEHSLVCGSPATVAEKLSEVGKSGIGGLIMQFRLGPMSYEDTAG
                     SLTLFHEKVRPHL"
     gene            complement(2007..>2361)
                     /locus_tag="VHX39_35690"
     CDS             complement(2007..>2361)
                     /locus_tag="VHX39_35690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acyl dehydratase"
                     /protein_id="HEX3996542.1"
                     /translation="IPNRFNIPDCPERVHWEPEFAVMVGAPGAYDYGPERCSWLTHHL
                     TNWMGDDGFLRRASSKIRRHNLEGDVLFIKGSVTRKFQDDGRYMVEIAQEARNQDDEL
                     SVLGTGIVELPATGA"
BASE COUNT          457 a          698 c          712 g          494 t
ORIGIN      
        1 gtgcctggtc aacccaggtc atgaaccctc gccgcagcgc caacatgttt gccgttgatg
       61 gccgggacac ctggctgatc cacaactatc tgcgggagtc ggaaaccgac ttcgatgcca
      121 tcgacgctga ctggtgcatc cgtaccatca tgggtgtcga tgcggccttt cactacgatg
      181 tcattacgcg agagaattgg atcggccgcc gcttgctcgc cgatcggttt cgtgaccgcc
      241 gggcgttcat ttgcggcgat gcggcgcatc tttgggtgcc atccgcgggc tttgggatga
      301 acgccggcat cgctgatgca atgaatttgt cctggatgct ggctggcgtg ttgcatggtt
      361 gggctgatcc ggccatcctc gcggcacacg aggcagagcg ttggccaatc accgaacaag
      421 tctcgaaata tgccatgagt acgtcgcttt ctgtcgcccg gacgcgcgcc gaagtgcccg
      481 aggatatcga aaccaacgct gcaacccaga tagaattcgg ccttgcgatg cagaaaatgc
      541 atacgccgca attttgctgt ggcggtttga atttcggcta cttttaccag cattcgccga
      601 tcattgaata tgacggagag atcgcaccgc cttacacgat ggatcagttt acgccggcga
      661 cggtccccgg gtgcagaacg ccgcatatct ggcttgacgg cggccggtcg ctatatgacg
      721 cgatggggcc cgacttctgt ttgctgcggt ttgaccgttc tgtcgatgtc cgcaggctgg
      781 tcgatgccgc agcatttcga aagtttccat tacgcgtgct ggatgttgtg ccgacggagg
      841 tccaccgcca caaactgttg ctttcccggc ccgatcagca cgtcgcgtgg cgcggcaaca
      901 gcgtgccgga caatccgctg ccgctggtcg acaaagtcag aggtgcggcc tgaccttttc
      961 gtggaacaac gtcagactgc cggcagtgtc ctcgtaggac attgggccaa gccggaactg
     1021 catgatcagg ccgccgatgc cggatttgcc gacctcggac agcttctcgg ccaccgtcgc
     1081 cggagagccg caaaccaggg aatgttccag caccatgcgc gcgggaggcg cagttcccgg
     1141 cgccggcatc ggaacaatgg atacgccctg ctcgcggtaa acccgttcgc gcatcgcaac
     1201 gcggtgggcg tgcatggcgt gaaatgccgg gacggcaatc cgttccgctt ccccatccgt
     1261 ctcggccacg aagacgttgc gccaggccca gcattgatcg acgttggtgg cgatcgttgc
     1321 ttcgtcctga ccaatcgaac gtaacgtctg gcggtaaagt tccattcgtt gcagcgtggt
     1381 cgcattgctt tgcacattca tcatgaaagg ccggccgcgt ctggcgatgt cgagcatgcc
     1441 atgctcggtc gcggcagcac gaatcacata agggtgcggt ttcgtgtacg gcaccggtcg
     1501 gaacgcgggc agccgcaggt tgaagaattc gccgtgatgt tcgaaagcct cgcctttcca
     1561 cgcctcgaac atgatcgctt ccgcttcctc aaaccgctcc tgggcttgtg tgtgatcgat
     1621 gccgaatccc tgatagtcgt aaatattgta ggcggtgcct cggccaaggc ccacgatcaa
     1681 acggcccttc gaaaggtgat caatgagaga aatctgctcg gccatgcgga ttggatggtg
     1741 caatgccatc tgcgcaacgg cgaagccgat ctttgcctgc tgcgtggcgg tggccagcgc
     1801 ggcagcgaag ctgatcggat cgacgtaggc gcaaatgccg tcgaagtgat gctctgccag
     1861 ccagatgaca tcgaacccga gttcatcggt cagctttgcc tcgcgcaacg tctcatcgat
     1921 cacctgtgcg tcatcggcgg cagtgctact ctgcgggaac agaaagttgg aaacgcgcat
     1981 ggttgggccc ttcgtcggag cccgcatcat gcgccagtgg cgggcagttc cacaattccg
     2041 gtgccgagga ccgacagctc gtcgtcctgg ttgcgcgcct cctgggctat ttcaaccata
     2101 taccggccgt cgtcctgaaa cttgcgggta acggaaccct tgatgaacag cacgtcgccc
     2161 tcgagattat ggcgacgaat tttgctcgac gcgcggcgaa ggaagccgtc gtcgcccatc
     2221 caattggtca ggtgatgggt caaccaggaa caacgctcgg ggccgtagtc ataagcccca
     2281 ggcgcaccga ccataacagc aaactctggt tcccagtgca cgcgttccgg gcagtcggga
     2341 atgttgaagc gattcggaat c
//
LOCUS       DATAVD010001873         1992 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2410855, whole genome shotgun sequence.
ACCESSION   DATAVD010001873 DATAVD010000000
VERSION     DATAVD010001873.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1992
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2410855"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..593)
                     /locus_tag="VHX39_35695"
     CDS             complement(<1..593)
                     /locus_tag="VHX39_35695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996543.1"
                     /translation="MGLTQALATSASGLRVVQAGISLVSSNVANAQTPGYVRKTLVTQ
                     STAAGQGTIGVQATGVQRELSQYVQAQYRTESAGGAYADTTAQFLDRVQQLLGQPGAA
                     GSLDATYNDFTTALQALQTSPESFSAQSSAVSAAQALAQQLNGISDNVQELRGEAESG
                     ITDAVQQANDAMQHIANINQQLAASTSDDTSTAALED"
     gene            complement(650..>1992)
                     /locus_tag="VHX39_35700"
     CDS             complement(650..>1992)
                     /locus_tag="VHX39_35700"
                     /inference="COORDINATES: protein motif:HMM:TIGR03506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein"
                     /protein_id="HEX3996544.1"
                     /translation="TGLQAQSYALDNISGNIANSQTTGFKRIDTSFEDLIPDTSLNQQ
                     AAGSVLAFSRATNNVQGDVQTMTVPTYMAINGSGYFTVEKPSGTVDSNPVFDGVDLYT
                     RRGDFTLNAQGYLVNGAGYYLMGQPIDQSTNNPSGSVPETLQFSNDLLPAVATTQIQY
                     RANLPAVPSTQDSSATVPDSDLIDPTAYSVNPLVAGTGTVVGTDVNTFLAQSISGGAI
                     TAYDSTGAATNVQLRWAKTANASTSSTDTWELFYQTNSTATGSQVGWQNAGTSFDFDS
                     TGQMNPLVANQTLTNLTVDGTSLGNVALQFGSGGVTQFSDSNGSVKVNNITQNGFPAG
                     SLQGVSINNDGRVVGAYTNGRTIDLAQISLATFNGEDFLKRMDGSTFAATDESGAAHY
                     SGGGQIVGSALEASNTDISDEFSKLIVTQQAYSANTRIVTTSNEMLQDVMAMIR"
BASE COUNT          300 a          589 c          677 g          426 t
ORIGIN      
        1 tggtcctcga gcgcggcggt cgaggtgtcg tcggaggtcg aggccgcgag ttgctggttg
       61 atgttggcga tgtgctgcat cgcgtcgttg gcctgctgga cggcgtccgt gatgccgctt
      121 tcggcctcgc cgcgcagttc ctgcacgttg tcgctgatgc cgttgagctg ttgtgccagc
      181 gcctgcgccg cgctgaccgc actagactgg gcggagaagg attccgggct ggtctgcagc
      241 gcctgtagtg cggttgtgaa atcgttgtag gtcgcgtcga gcgaaccggc ggcacccggt
      301 tgtccgagaa gctgctgcac ccgatcgagg aattgcgcgg tcgtgtccgc ataggcaccg
      361 ccggcgcttt cggtgcgata ctgcgcctgc acatactggc taagctcgcg ctggacgccg
      421 gtggcctgaa cgccgatcgt cccctggccc gcagccgtgc tctgcgtgac cagcgtcttg
      481 cggacatagc ccggcgtctg cgcgttcgcc acgttcgacg agacgagcga gattccggcc
      541 tgcacgacgc gcaggccgga cgccgacgtt gcgagcgcct gtgtcaggcc catcgcggtt
      601 ccctctgccg agtgctcacg acacgtcgtc cattaaagat gccgagccgt caccggatca
      661 tggccattac gtcttggagc atttcattgc tggtggtgac gatccgcgtg ttggccgagt
      721 aggcctgctg ggtcacgatc agcttgctga actcgtccga aatgtcggtg ttggatgctt
      781 cgagcgcgct gccgacaatc tgtccgccgc cgctatagtg tgccgcgccg gattcgtccg
      841 tcgccgcaaa cgtgctgccg tccatgcgct tgaggaagtc ctcgccgttg aacgttgcga
      901 ggctgatctg cgccagatcg atggtgcgcc cattggtgta ggcgccgacc acgcggccgt
      961 cattattgat cgacacgccc tgcaggctgc cggccggaaa gccgttctgc gtaatgttgt
     1021 tgaccttgac gctgccgtta ctgtcggaaa actgcgtcac gccgccggag ccgaactgaa
     1081 gggcgacatt gccaagcgac gtgccgtcga ccgtcaggtt ggtcagcgtc tggttggcga
     1141 cgagcgggtt catctgcccg gtggaatcga agtcgaacga agtcccggcg ttctgccatc
     1201 cgacctggct gccggtcgcg gtcgagtttg tttggtagaa cagttcccag gtgtcggtgc
     1261 tgctggtgct cgcattggcg gtctttgccc agcgaagctg aacattggtg gctgcgccgg
     1321 tcgagtcgta ggcggtgatg gcgccgccgc tgatgctttg ggcaaggaac gtattgacgt
     1381 cggtgccgac gaccgtcccg gtgccggcga cgagagggtt taccgagtag gccgtcggat
     1441 cgatgaggtc ggagtccgga accgtcgcgc tgctatcctg cgtcgagggg acggccggca
     1501 agttcgcacg gtattgaatt tgggtggtgg cgaccgcagg cagcaagtcg ttgctgaact
     1561 gcagcgtctc cggcacgctg cccgacgggt tgtttgtact ctgatcgatc ggctgcccca
     1621 tcagataata gccggcgccg ttgaccagat agccttgcgc gttgagcgtg aagtcgccac
     1681 ggcgggtata gagatcgacg ccgtcgaaca ccggattgct gtcgaccgtg cccgagggct
     1741 tctccacggt gaaatagccc gagccgttga tcgccatgta ggtgggcacc gtcatcgtct
     1801 ggacgtcgcc ctgcacgttg ttggtcgcac gcgaaaacgc cagcacgctt cctgccgcct
     1861 gctggttgag gctcgtgtcc gggatcaggt cttcgaagct ggtgtcgatc cgcttgaagc
     1921 ctgtcgtctg tgaattggcg atgttgcccg agatgttgtc gagcgcgtag gactgcgcct
     1981 gcagacccgt ca
//
LOCUS       DATAVD010001874         3750 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1850523, whole genome shotgun sequence.
ACCESSION   DATAVD010001874 DATAVD010000000
VERSION     DATAVD010001874.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3750
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1850523"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(48..998)
                     /locus_tag="VHX39_35705"
     CDS             complement(48..998)
                     /locus_tag="VHX39_35705"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03619 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEX3996545.1"
                     /translation="MQIGFNAPTSGPLIEPDSFVSIITEGEALGFDYVTVSDHIMVPR
                     NLESTYPYTDTGEFPAGTQAAWLDQLGATAFIAALTKKLRFVLSVMVVPHRPAVLTAK
                     LLSTIDHLSKGRLTLGIGVGWCREEFEAIGAAPFDDRGHVTDEWMAACQELWTAEFPK
                     FDGRYVKFDDVTFNPKPAQSPIPIWVGGESGPALRRTARYAHGWYPVGTNPQFPMNTV
                     SRVKKQLQRFHGFVERAGRDPAEISVALRVLAGPGGKPRATIDGEAEMFTGDDAHWVE
                     DIKALQELGVAAVDVRLFRRRLEDTLDTMRRFRDGVLAKL"
     gene            complement(1025..2242)
                     /locus_tag="VHX39_35710"
     CDS             complement(1025..2242)
                     /locus_tag="VHX39_35710"
                     /inference="COORDINATES: protein motif:HMM:NF005761.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding domain"
                     /protein_id="HEX3996546.1"
                     /translation="MKTGARTILISGAGIAGPTLAFWLLRRGFRPTVVELAPGPRSGG
                     YVIDFWGLGYEIAERMGLEAELKERGYRPEEVRFVDDHGRRTGGFGVDAFRALTNDKY
                     VTIARSDLAMMIYRKIADDCEMIFGDGIVTMTDSGDGIDVTFAHGGERRFDLVIGADG
                     LHSAVRRLAFGADDRFEKYLGYGVAAFESDGYQPREDNVYISHGTPGRQISRFALRKG
                     RTLFLFVFATDAPAQSWPRGDAERKQILTDEFRTTGWEAPRILAALAAAHDIYFDPVS
                     QIRLDLWARGRTSLVGDAAFCPSLLAGQGSALAMAASYVLAGELAATGGQYQEAFARY
                     DHRLRRFILGKQRTAEKYARAFVPRTEFGLWFRDSVSRLIGVPGLATLVLGRGLLDRL
                     RLPDYPNALDQSS"
     gene            complement(2334..3287)
                     /locus_tag="VHX39_35715"
     CDS             complement(2334..3287)
                     /locus_tag="VHX39_35715"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HEX3996547.1"
                     /translation="MQIGCSAPTSGPLIGPDSLVRIAQEAEMLGYDYVTVSDHVMIPT
                     SIASRYPYSDSGEFPSGAAAERLEQLTAATFIAASTSKLRIVTSVMVVPHRPAVLTAK
                     ILATIDYLSKGRLTLGIGAGWCEEEFIAIGAPPFAERGAVTDEFMMVCKELWTSDQPK
                     FDGKYVQFKDVLFPPKPVQKSIPIWIGGESGPAMRRTAKYGDAWYPIGTNPQFPMDTL
                     DRFKAAAAKLRGMTEKAGRDPKAVALAYRVSSNPEAQPKGTVDGQRKLFTGGAADFAG
                     DIKALQDVGVTSFDFGMFGPSLDATINNMRAFRDNVVAKVH"
     gene            3370..>3750
                     /locus_tag="VHX39_35720"
     CDS             3370..>3750
                     /locus_tag="VHX39_35720"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3996548.1"
                     /translation="MEFGIHIGTRGCMADRTNMMAVASAAEAKGYGIIGVPDHLIIPE
                     TPDPTYPYLASGLHPAAEHGECFDAIATLAFLAGCTTRIRLLASIVVVPYRPAILAAK
                     LFQTADVLSGGRIIAGVGAGWMKAE"
BASE COUNT          722 a         1221 c         1096 g          711 t
ORIGIN      
        1 gggccggccc acctccgcgc gttttaattg catacgaaag catgcaatca cagtttcgcc
       61 agaaccccat cgcgaaaccg ccgcatggta tccagcgtat cttccaaacg ccgccggaac
      121 agccgaacgt cgaccgcggc gacaccaagt tcctgcaggg ccttgatatc ctcgacccaa
      181 tgcgcgtcgt ctccggtgaa catctccgcc tcaccgtcga tcgtggctcg aggtttgccg
      241 ccaggtccgg ccaacacgcg caacgcaacc gagatttccg ccggatcgcg tcccgcccgc
      301 tcgacaaaac catgaaagcg ttgcagctgt ttcttaaccc ggctgacggt gttcatcggg
      361 aattgcggat tggtcccaac cggataccaa ccatgcgcgt accgcgcggt ccggcgcaga
      421 gcaggcccgc tttcaccacc aacccaaata ggtatcggcg attgcgcggg ttttggattg
      481 aaggtcacgt catcgaattt cacgtagcga ccgtcgaatt tgggaaactc tgcggtccat
      541 agttcctgac acgccgccat ccattcgtcc gtgacgtgac ctcggtcgtc gaatggcgcg
      601 gcgccgattg cttcgaactc ctcgcgacac caccccacac cgataccgag cgtcagccta
      661 cccttggaca aatggtcgat ggtggaaagt aatttcgcgg tcagcacggc cggccgatgc
      721 ggcaccacca tcaccgacag cacgaagcgc agcttcttcg tcagagcggc aatgaacgcc
      781 gtggcgccga gttggtccag ccatgccgcc tgggtccctg caggaaactc tcccgtgtcg
      841 gtatagggat acgtcgactc cagattgcgc ggcaccatga tgtgatcgct gaccgtcacg
      901 tagtcgaaac cgagtgcttc gccttcggtg atgatactga caaaactgtc tggctcgatc
      961 agcggcccgg aggtgggagc attgaatccg atttgcatgg tctctccttg ggctgatcgg
     1021 ggcgtcacga ggattggtca agggcattgg ggtaatccgg caggcgcagc cgatcaagta
     1081 atcccctgcc gagaacgagc gtggcgagtc ccggaacgcc aattagtctg ctcacactgt
     1141 ctctgaacca caggccaaat tcagtgcgtg gcacgaaggc gcgggcgtat ttttccgcgg
     1201 ttcgctgttt tcccaggata aagcggcgca gccggtggtc gtagcgggcg aacgcctcct
     1261 gatactgtcc tccggtggca gccaactctc cggcgagcac gtatgaggcg gccatcgcga
     1321 gcgccgatcc ctgtcccgca agcagcgacg ggcaaaacgc ggcgtcgcct accaacgacg
     1381 ttcgtccccg agcccagagg tccaggcgaa tttgactcac ggggtcgaaa taaatgtcgt
     1441 gagctgcggc caacgccgcg aggatgcgtg gtgcttccca tccggtggtg cgaaactcat
     1501 cagtcagaat ttgttttcgc tcggcgtcgc cgcgcggcca tgattgcgct ggtgcatcgg
     1561 tcgcgaacac gaacaagaac aatgtgcgtc cctttcgcaa ggcgaaccgc gatatctgcc
     1621 gcccaggagt gccgtgcgaa atgtagacat tgtcttcacg cggttggtac ccatcagact
     1681 cgaacgcggc cacaccgtaa ccgagatatt tttcgaaacg atcgtcggcg ccgaatgcca
     1741 ggcgccgcac ggcagagtgc aaaccgtcgg cgccgatgac caaatcgaac cggcgttctc
     1801 ctccgtgcgc gaatgtcacg tcgataccat cgccgctgtc cgtcatcgta acgatcccat
     1861 cgccaaagat catttcgcag tcgtcggcga tcttccggta gatcatcatc gcgaggtcgc
     1921 tgcgtgcaat ggtcacatat ttgtcgttcg tgagggcgcg gaaggcgtcg accccgaacc
     1981 cgccggttcg cctgccgtgg tcgtcaacga agcggacctc ctctgggcgg tagccgcgtt
     2041 ccttgagttc cgcctccagg cccatgcgtt cagcgatttc ataaccgagg ccccagaagt
     2101 cgatgacata gccgccggag cgtggcccag gcgccagttc cacgaccgtc ggacgaaagc
     2161 cgcgacgcag caaccaaaag gccagtgtcg gtcctgcgat gccagcgccg gaaatcaaaa
     2221 tggttcgtgc cccggttttc atggccggcg gcgtcctcac ctcgcggcga ggcgcgacgt
     2281 cgcaacgcgc gggtcacgcc gtgcagccag cggggtgacg gcgtcagacc ggatcagtgc
     2341 accttcgcca ccacgttatc tcggaacgcg cgcatgttgt tgatcgttgc atccaaactc
     2401 ggcccgaaca tgccgaagtc gaacgacgtt acgccaacat cctgcaacgc cttgatgtct
     2461 ccggcgaaat ctgctgcccc tccggtgaac aacttgcgct gcccgtccac ggtgcctttc
     2521 ggctgtgcct ccgggttgga cgatacgcga taggccagcg ccaccgcctt cggatcgcgt
     2581 cccgccttct cggtcatgcc acgcagcttc gcagcagccg ccttgaaccg gtccagagtg
     2641 tccatcggaa attgcgggtt ggtgccgatc gggtaccagg catcgccgta tttcgccgtc
     2701 cgccgcatcg ccggtccgct ctcaccaccg atccagatcg ggatcgactt ttgcaccggc
     2761 ttcggcggga acagcacatc cttgaattgc acatatttgc cgtcgaattt cggctgatcg
     2821 ctggtccaga gttccttaca gaccatcatg aactcgtcag tgactgcacc gcgttcggcg
     2881 aacggcggag cgccgatggc gatgaactcc tcctcgcacc agccggcgcc gattcccaat
     2941 gtcagccgcc ctttcgacaa ataatcgatg gtggcaagga tttttgccgt cagcacggcg
     3001 ggccgatggg gcaccaccat gaccgacgtg acaatccgca gcttcgacgt cgatgccgca
     3061 atgaacgtcg cggcagtcag ttgctccagc cgctcggccg ccgcccccga tggaaattct
     3121 ccggaatccg aatacgggta gcgcgaggcg atgctggtcg ggatcatcac atgatcgctc
     3181 accgtcacat aatcataacc caacatctcc gcctcctgcg cgatgcggac gaggctgtcg
     3241 gggccgatca ggggaccgct cgtgggtgcg ctgcaaccga tctgcatgtt tacctcccgg
     3301 gctgaattgc cagtctgccg ccgatagcac acgatgcggc cgccagtggc aaccagggga
     3361 gcagacagcg tggaattcgg catccatatc ggcacgcgtg gctgcatggc cgatcgcacc
     3421 aacatgatgg cggtcgccag cgccgccgag gccaagggct acggtatcat cggcgtcccc
     3481 gatcacctga ttattccgga gacgccggac ccaacctacc cctatctggc gagcggcctg
     3541 cacccagccg ccgaacatgg cgagtgcttc gatgccatcg ccacactggc gttcctcgcc
     3601 ggctgcacga cgcggatcag gctgttggcc tcgatcgtcg tggtgcccta ccggcccgct
     3661 atcctggcag cgaagttgtt ccagacggcg gacgttctct ccggcggccg gatcattgcc
     3721 ggtgtcggtg cgggctggat gaaggccgag
//
LOCUS       DATAVD010001875         1698 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_181057, whole genome shotgun sequence.
ACCESSION   DATAVD010001875 DATAVD010000000
VERSION     DATAVD010001875.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181057"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..981
                     /locus_tag="VHX39_35725"
     CDS             <1..981
                     /locus_tag="VHX39_35725"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3996549.1"
                     /translation="FILPVAKWRGYQGKANVYGKSFETLTHGAALAALTKRIAIFSTV
                     HVPLVTPAFAAKAIATIDHISHGRAGLNIVCGWNQNEFDLHGVTIDPASRYDHGLEWF
                     EIWSRLLLGGPEFDWDGRFFHLKKLQTDPLSIQRPWPAVMSAGFSPAGRDFAARAADV
                     LFLNVTELDQVPAILTDVGTQMARHNRSISVFTMGHVVCRPTRREAAEYFHYFAEEMQ
                     DPAGQAYYIENRGATVSDGTRQIARPLLNRFHRANGLRYAGAYPGVYPFVGTPDDIAE
                     EMARMSATGLAGCTVAFVDYLKEIPLFIAEVLPRLERLALRAAPARQSLA"
     gene            complement(1067..>1698)
                     /locus_tag="VHX39_35730"
     CDS             complement(1067..>1698)
                     /locus_tag="VHX39_35730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014247929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEX3996550.1"
                     /translation="LPDAVDIVATDLNQPMLDHAFSKPGMARVRFQQADALALPFPDR
                     AFDTVVCQFGVMFFPDRVAGLREARRVLRPGGKFLFSTWGHIEDNPVMAITVEALRRR
                     YPAHPTWFLERTPCGYFDLDVIRSDLRSAGFASSTIETVKLAGSVTGPRAPALGFCQG
                     TPMMAEILSVDPGGLQAATDAAESLLRDRFGPGPFSTDLLALVVETMAP"
BASE COUNT          334 a          529 c          501 g          334 t
ORIGIN      
        1 ttcatcctac ctgttgccaa atggcgcggc taccagggca aagccaacgt ctatggcaaa
       61 tcgttcgaga ccctgaccca cggcgcagca ctggctgcac tgaccaaacg cattgcgatc
      121 ttttccaccg tgcatgtgcc gctggttacg ccggcttttg ctgccaaggc catcgccacc
      181 atcgatcaca tctcgcatgg ccgcgccggc ctcaacatcg tgtgcggctg gaaccagaac
      241 gaattcgatt tgcacggcgt gacgatcgat ccggcctccc gctatgacca tggcctggag
      301 tggttcgaaa tctggtcccg cctgcttctg ggcggtccgg agttcgactg ggacggccga
      361 ttcttccatt tgaagaagtt gcaaaccgat ccgctgtcga tccagcggcc gtggccggcg
      421 gtgatgtccg cggggttttc acccgccggt cgtgactttg ccgcgcgtgc cgccgacgtg
      481 ctgttcctga atgtcacgga actggaccag gtccccgcca tcctgaccga tgtcgggacc
      541 cagatggcgc gccacaatcg ctcgatttcc gtgttcacca tgggtcatgt cgtctgccgt
      601 ccgacacggc gcgaagcggc agagtatttc cattatttcg ccgaggaaat gcaggatccg
      661 gcaggtcagg cctattacat cgagaaccgc ggagctacgg tcagcgacgg cacgcgccag
      721 attgctcgtc cgctgctgaa ccgtttccac cgtgccaacg gcctgcgcta tgccggcgcc
      781 tatcctggcg tctacccatt cgtcggcaca ccggatgaca ttgccgagga aatggcgcgc
      841 atgagcgcaa caggcctcgc cggttgcacc gtcgccttcg tcgattacct gaaggagatc
      901 ccgcttttca tagccgaagt gctgcccaga ctggaacgcc tcgcgttgcg cgcagcgccg
      961 gcgaggcagt ccttggcgtg attgcacgtg ctgtcgaggc gttgattccg gctacctgct
     1021 cagtcagacg ccatgctccg gacatggaag tggctcaggt gaacctctat ggcgccatgg
     1081 tctctacgac gagtgccaac aggtccgtcg agaacggccc agggccgaaa cggtctcgca
     1141 gcagcgattc ggcagcgtcg gttgctgcct gaagtccacc gggatcgacc gacaggatct
     1201 cagccatcat cggtgtgcct tggcagaaac caagagccgg cgcgcgagga ccggttacgc
     1261 ttcctgccaa tttgacggtt tcaatcgttg aggatgcaaa gcctgcagac ctgaggtcgg
     1321 atcgtatgac gtcgagatcg aaatatccgc acggtgtgcg ttccagaaac cacgtcgggt
     1381 gggccggata acgtcgccgc aacgcctcca ctgtaatggc catgacgggg ttatcttcga
     1441 tatgccccca ggtgctgaac aaaaatttgc cgccgggcct gagtacacgg cgagcctccc
     1501 gcaatccggc cacgcgatcc gggaaaaaca ttacgccaaa ttgacaaacg acggtgtcaa
     1561 aggcgcgatc ggggaacggc agagccaacg catcggcttg ttggaaccgc acgcgagcca
     1621 tgcccggttt gctgaatgca tgatcgagca tcggctgatt gagatcagtc gccacgatat
     1681 cgaccgcatc cggtaacg
//
LOCUS       DATAVD010001876         1540 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3528288, whole genome shotgun sequence.
ACCESSION   DATAVD010001876 DATAVD010000000
VERSION     DATAVD010001876.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3528288"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..962
                     /locus_tag="VHX39_35735"
     CDS             <1..962
                     /locus_tag="VHX39_35735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996551.1"
                     /translation="AKVSLETYRLNRIDPVSCWVECAGARIEGVPVFDSPPTGPMGLN
                     GPIALVRLSPWAVYTPDYRAMRRASDRAGMVIVCQGEELGLALLNAERFREPYGCPAI
                     QVAEMPPAEPLRMTSFYRRTSVEASNVVVTIPGRDPARRKVVVMTPRSSWWHSTSERG
                     GGLVCWLETLRGLLETPPMADVVMTANSGHELGHLGLDAFLEQRPGWDAENGAIWVHY
                     GANIGAAGGQLTIQSADRHLREAMRQALDAFGQPPDAMAPETQVPNGETRDIHRMGGH
                     YVTLVGSNRLFHLPRDRWPHAVDVPVIERIAAGATAMVRAVAG"
     gene            1014..>1540
                     /locus_tag="VHX39_35740"
     CDS             1014..>1540
                     /locus_tag="VHX39_35740"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3996552.1"
                     /translation="MLTIEPNGAVLGATVHGVDAPKPISDAEFGKLLAALGEYGVLRL
                     PNQQLDEDGVRRFSRLFGDIQGPSSGPLAADGKEVPVVGILSNIKENGKYIGAADAGQ
                     DWHTDMSYRDVIGFVNVLYGVRIPHRDGRPLGGTEFSNMHAAYEALPDKIKIDLAHAT
                     VTHTFEKFWEHMRQN"
BASE COUNT          291 a          455 c          512 g          282 t
ORIGIN      
        1 gcgcaaaggt gtcgctggaa acctaccggc tgaaccgcat cgatccagtg tcctgctggg
       61 tcgaatgcgc cggagcccgg atcgagggcg tgccggtatt cgactctccg ccgaccggac
      121 cgatgggcct caatggaccg atcgccctgg tccgcctctc accgtgggcg gtctatacgc
      181 cggactatcg cgccatgcgg cgcgcctccg atcgcgccgg aatggtgatc gtctgtcagg
      241 gcgaggaact cggtctggct ctgctgaacg cggaacgatt ccgcgagccc tacggctgcc
      301 cggcaattca ggtggccgag atgccgccgg ccgaaccgct gcgcatgacg agtttttacc
      361 ggcgcacgtc agtcgaggcg agcaatgtgg tcgtcacgat cccgggccgt gaccccgcgc
      421 ggcgaaaggt ggtggtgatg acgccacggt cgtcctggtg gcactcgacc tcggaacgcg
      481 gcggcggcct ggtgtgttgg ttggaaacgt tacgcggcct tcttgaaacg ccgccgatgg
      541 ctgatgtcgt gatgaccgcc aacagcggcc atgaactcgg ccatctcggg ctggatgcgt
      601 ttctcgagca gcggcctggc tgggatgctg agaacggcgc catctgggtg cattacgggg
      661 ccaatatcgg agccgccggt gggcaactca cgatccagtc cgccgaccgc catttgcgcg
      721 aggcgatgcg tcaggcgctg gatgccttcg gtcagcctcc cgatgcgatg gcgccggaaa
      781 cccaggtgcc gaacggcgag accagagaca ttcatcggat gggcggccat tacgttacgc
      841 tggtgggcag caatcggcta tttcatttac cgcgcgatcg ttggccgcac gcggtcgacg
      901 ttccggtgat cgaacggatt gccgccggtg ccaccgcgat ggtacgggct gtggccggat
      961 aattggaccg gaaccggcgg acagcgtaaa atgccgaccg acggaggcaa acgatgctga
     1021 ccattgaacc aaacggcgcg gtcctgggtg ccacggtgca tggcgtggac gcaccaaaac
     1081 cgatttcaga tgctgagttt ggtaagctgc tggcggcact cggcgagtac ggcgtgttgc
     1141 gtctgccaaa ccagcaattg gatgaagacg gagtgagacg gttttcccgc ctgtttgggg
     1201 acattcaagg gccgtcctcc ggtccgctgg ccgcggacgg taaggaagta ccggtcgtcg
     1261 gcatcctgtc caacatcaag gaaaacggca aatacatcgg cgccgccgat gccggccagg
     1321 actggcacac cgacatgtcg tatcgcgacg tgattggttt cgtgaacgtg ctgtacggcg
     1381 ttcgtattcc gcaccgcgac ggaaggccgc ttggcggcac cgaattctcc aatatgcatg
     1441 cggcgtatga agcgttgccg gacaagatca agatcgatct ggcgcatgct accgttacgc
     1501 acacgttcga gaaattctgg gaacatatgc ggcagaacaa
//
LOCUS       DATAVD010001877         1583 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1665357, whole genome shotgun sequence.
ACCESSION   DATAVD010001877 DATAVD010000000
VERSION     DATAVD010001877.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1665357"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..677)
                     /locus_tag="VHX39_35745"
     CDS             complement(<1..677)
                     /locus_tag="VHX39_35745"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEX3996553.1"
                     /translation="MTEERQYVDYERNGSIVTIAMNRPEKLNAVSDEVVRQLMTAFRQ
                     FDADPEAHVAIFCGRGRAFCSGADVLQRQLRSREEFERLGGPQGHGANSGDLLMQSVN
                     WKPVIAAVHGYVLGLGLGMVLDCDLIVAEAGTKFHLTETSRGLGSAKQWAQLHFRSGA
                     FADEIALTGRYFTAEEAMVANVINRVAPAGTVMAAAQELAEAVAANPPLSVRATVRTR
                     RWRLGQAV"
     gene            751..1539
                     /locus_tag="VHX39_35750"
     CDS             751..1539
                     /locus_tag="VHX39_35750"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX3996554.1"
                     /translation="MPLLYEKRGHVAVLTLSRPEARNAWCVEYNERFIELMPALEDDR
                     DIRCVVLTGDPAGNAFSAGADLKNPKTHTHESVADFIEEVPSRRRQSAIALVTDFSKP
                     IIAAVNGYAIGIGCIVTYCCDMIVASEAAEWRLPQAGLGIIPAQGGTIRLARWVGKGV
                     AMRAALGFPLHADEAFRIGLAQWLVPPASLMDKAMEVADHIASLPPLAARLTKESLRS
                     GLEQPLPEAVLGDLYRFAMLEMTDDKAESHRSWRERRRPDFKGR"
BASE COUNT          302 a          482 c          489 g          310 t
ORIGIN      
        1 actgcctggc caagccgcca acgccgcgtc cgtaccgtcg ctcgtacact caacggcggg
       61 ttcgccgcga cagcttcggc aagctcctgc gccgcggcca tgactgtacc ggctggcgcc
      121 acacgattga taacattggc aaccatcgcc tcctcggccg tgaagtaacg tccggtcaga
      181 gcaatttcat cggcaaatgc cccactgcga aaatgcaatt gcgcccattg cttggctgaa
      241 ccaaggccgc gcgaggtctc ggtcaaatgg aatttcgttc cagcctcagc gacgatcagg
      301 tcgcagtcca gcaccatgcc cagtccgaga ccgagaacgt agccgtggac ggcggcgatg
      361 acgggcttcc agttgaccga ctgcatcaac aaatcgccgg agttggcgcc atggccttgc
      421 ggtccgccca atcgctcgaa ttcctcgcgc gagcgcagtt ggcgttgaag gacgtcggcc
      481 ccgctgcaaa acgcgcgccc gcgaccgcag aagatcgcaa cgtgcgcttc ggggtcggca
      541 tcgaattgtc ggaacgcggt catcaattgc cgcacgacct cgtcgctgac ggcgttcagt
      601 ttctccggcc ggttcatcgc gatggtgacg atgctgccgt tgcgctcata gtcgacgtat
      661 tgccgttcct cggtcatcac tcgtccccgt ggcttttctg ggctccgggt gtaccgtagg
      721 cagagcagac ggaaaagagg gaacggcgcg atgccattgc tgtatgagaa acgtggtcat
      781 gttgcagtcc tgacgctgag ccggccggaa gctcgcaatg cgtggtgcgt cgaatataat
      841 gagcggttca tcgaactgat gcctgcgttg gaggacgacc gcgacatcag atgcgtcgtg
      901 ctgaccggcg atccggcggg caacgcgttc agcgcgggcg cagatctgaa gaacccgaaa
      961 acccacaccc atgaatccgt cgccgacttc atcgaggaag tgcccagtcg acgccgtcaa
     1021 agcgcgatcg ctctggtcac ggatttctcg aagccgatca ttgccgcagt gaatggttat
     1081 gccatcggga tcggctgcat cgttacctat tgctgcgaca tgatcgtcgc ctccgaggct
     1141 gccgaatggc gattgcctca ggccggcctc ggcatcatcc cggcacaggg cggcacgatc
     1201 cgcctggcgc gttgggttgg taagggcgtt gcgatgcgtg ccgctctggg cttcccgttg
     1261 cacgcagatg aggcatttcg cattggtctc gcgcaatggc tggtgccgcc ggcgtcgctg
     1321 atggacaagg ccatggaggt cgcggaccac atcgcatcgt tgccgccatt ggcagcacgg
     1381 ctgaccaagg aatcattgcg ctccggtttg gagcagccgt tgcctgaagc cgtactgggc
     1441 gatctctatc gcttcgcaat gctggaaatg accgacgaca aagcggaaag tcatcgctcc
     1501 tggcgagaac gccgcagacc agacttcaag ggacgttgat catggcgatg ccgctttcgg
     1561 gtgtgacggt actggatttt ggc
//
LOCUS       DATAVD010001878         4634 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_736568, whole genome shotgun sequence.
ACCESSION   DATAVD010001878 DATAVD010000000
VERSION     DATAVD010001878.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4634
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_736568"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..866)
                     /locus_tag="VHX39_35755"
     CDS             complement(<1..866)
                     /locus_tag="VHX39_35755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006116578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HEX3996555.1"
                     /translation="MQATAILLAAGLGTRMRSNLPKTLHKIAGRSMLRHLLASCEAAF
                     DKVVVVLGPDMEAVAKEAAPHTCVIQHERLGTAHAALQAVEHFGTGEVAVLYADNPLI
                     RPETMQRLLERRRRGDSGLALLAFRPSDPGRYGRVIVQHDHVARIVEWVDATEAERSI
                     DLCNAGVLCADAADMARWLMAVRADNAKGEYYLTDVVALAHAEQVRVAAVEAPAEELA
                     GVNSRAELAVAEAVVQGWLRHAALEAGVTMVDPSSVFLRADTQFEPDVTIEPNVVFGD
                     RVKVARGAVIRA"
     gene            973..1629
                     /gene="gph"
                     /locus_tag="VHX39_35760"
     CDS             973..1629
                     /gene="gph"
                     /locus_tag="VHX39_35760"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013093.1"
                     /note="PGP is an essential enzyme in the glycolate salvage
                     pathway in higher organisms (photorespiration in plants).
                     Phosphoglycolate results from the oxidase activity of
                     RubisCO in the Calvin cycle when concentrations of carbon
                     dioxide are low relative to oxygen. This enzyme is a
                     member of the Haloacid Dehalogenase (HAD) superfamily of
                     aspartate-nucleophile hydrolase enzymes (PF00702); Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0008967 - phosphoglycolate phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA];
                     GO_process: GO:0009853 - photorespiration [Evidence IEA];
                     GO_process: GO:0043094 - cellular metabolic compound
                     salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HEX3996556.1"
                     /translation="MARTLLLDLDGTLVDTAPDICAALNRLMRSRGLAQFTLAETAAM
                     IGDGVAVLVQRALAARGLRPDDVAVAEFGRDYAAHVAEASRPFPGVTEFLQEHADAGW
                     RMAVCTNKPEAAARQLLDDMGLARMLPVVGGGDSFPVRKPDPAHLLATLRLAGGDPSA
                     SVMVGDHANDVAAAHGAGVKSIFVTWGYGPLAMGQAADAVAGDMAALRLAIERLVPLP
                     "
     gene            1949..2404
                     /locus_tag="VHX39_35765"
     CDS             1949..2404
                     /locus_tag="VHX39_35765"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3996557.1"
                     /translation="MPTWQSRSAAGYAPEFRHQRYNIADLRRHLRRIDRPIIRQHMGL
                     RPSFDDAKFAGFPVATTTANTTFHVLDGFGQPVPIGVPGELYIGGNGVARGYLNRPDL
                     TAEQFIADPFSSDHARLYKTGDRVRCFGEPKPIISQSSGFPAARDQGGV"
     gene            2397..2720
                     /locus_tag="VHX39_35770"
     CDS             2397..2720
                     /locus_tag="VHX39_35770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996558.1"
                     /translation="MFEGGIAALNHYCPRCYPGKVDFLVCGYHTYPPEAPRAVWGRLV
                     EQPEVQSVPAEHAFTASVHAEYVANWLFDRVQEAIGQDLGPPDAEPMTNGLDAAPEPV
                     HSSSF"
     gene            complement(2802..3680)
                     /locus_tag="VHX39_35775"
     CDS             complement(2802..3680)
                     /locus_tag="VHX39_35775"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEX3996559.1"
                     /translation="MNRNAVGRDTDRVVVTFLKWFGIIALLLLSAGACDPPSAIDAVF
                     QPVTISGPDAVQIPPLAVPGARMPQGPIPAELKLPAGPGPFPAVIVLHGCAGLGASQW
                     IWAHRLNGWGYAALIPDSMTPRGIKRVCAPEAQGLVTWHDRVGDVGSAAAWLRTRPEI
                     DPDRIAVLGLSHGGSTAVIATQRAYAGFHLRAAIDYYGPCVDPKLHGDVPLMVLVGGG
                     DDWGRPGTRCTEFGAALKPGQVFEIHIYPGVYHAFDNPNMVRTVSNSHIMEYNQPAAE
                     DSYARVHVFLDRWVMH"
     gene            complement(3677..4453)
                     /locus_tag="VHX39_35780"
     CDS             complement(3677..4453)
                     /locus_tag="VHX39_35780"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEX3996560.1"
                     /translation="MKPAAQMFLLLCLGAPLAVHRAAAEQLNYSLHVVGVPVADAGLN
                     IDLSESGYRASMHFHTTGLANIVDGGQLEETVTGELKNDRPAPQVYTSSGYLHGQTRV
                     VDMTWHDGTPAVTAITPPNATEREDVPVALRAGTVDQVSLIVLLLRLVEQNGRCDGGA
                     RAYDGRDLQSFEVRTVGEEAIPAPGQLHFIGHALRCDFTSQTLAGWRFGAGGEQDRRP
                     HHGTIWLARVTPDGPRWPVRAAVETRWFGEATIYLTSVAP"
BASE COUNT          870 a         1485 c         1456 g          823 t
ORIGIN      
        1 aacgcacgga tcactgcgcc acgggccacc ttcacccgat ccccgaacac cacgttgggc
       61 tcgatcgtca cgtccggctc gaactgcgta tcggcccgca gaaacaccga ggacgggtcg
      121 accattgtca cgcccgcctc cagcgcggca tggcgcagcc agccctgcac gacagcctcg
      181 gccacggcga gttcggcgcg ggaattgacc ccggccagtt cctcggccgg cgcttcgacc
      241 gccgccaccc gcacctgttc ggcgtgcgcc agcgccacca cgtcggtgag gtaatattcg
      301 cccttggcgt tgtccgcccg caccgccatc agccagcgcg ccatatcggc cgcgtcggcg
      361 cacagcacac cggcattgca taaatcaatc gagcgttccg cctcggttgc gtccacccac
      421 tcaacgatcc gggcaacgtg gtcgtgctgc acgatgaccc ggccatagcg gccgggatcg
      481 gacggccgga acgccagcag cgccagaccg gaatcgcctc gccgacggcg ttccagcagc
      541 cgttgcatgg tctccggccg gatcagcgga ttgtcggcat acaacactgc aacttcgcca
      601 gtgccgaaat gctcgaccgc ctgcaatgcg gcatgggccg tgcccagtcg ctcgtgctga
      661 atgacgcagg tatgcggcgc ggcttctttg gcgaccgctt ccatatcggg gccaagcacg
      721 acaacaacct tgtcgaatgc cgcctcgcaa ctggcgagca gatgacgcag catcgaacgc
      781 ccggcaattt tgtgcagggt cttgggcaaa ttcgatcgca tgcgggtgcc cagaccggct
      841 gcgaggagaa tggcggttgc ttgcatgcgg attgcctgct tggctgcgac tgaccggtta
      901 gcggttgaaa ctcacgaatg tcaaagttta tggcatgcga ttggttcaaa tcagattacg
      961 gagtgcttca aagtggcgcg aaccctgctg ctcgatctcg acggaacgct ggtcgacacc
     1021 gcgccggaca tttgcgccgc gctgaaccgg ttgatgcgat cgcgtggcct ggcccaattc
     1081 accctggcgg aaacggcggc gatgatcggc gatggggtcg cggtattggt ccagcgcgcc
     1141 ttagccgccc gcgggttgcg gcctgacgat gtggcggtgg ctgagttcgg ccgcgattat
     1201 gcggctcatg tggccgaggc aagccggccg tttcccggcg ttaccgaatt cttacaggag
     1261 catgccgatg ccgggtggcg catggcggta tgcaccaaca agcctgaagc agcggcgcgc
     1321 caactgctgg acgacatggg tctggcccgg atgctgccgg tggtcggcgg cggggacagt
     1381 tttccggtgc gcaaacctga tccggcacat ttgctcgcca cgctgcggct ggccggcggg
     1441 gatccgtctg cctcggtcat ggtgggcgat cacgccaatg atgtcgccgc ggcgcacggc
     1501 gccggggtaa aatcgatctt tgtcacgtgg ggatatggcc cgctggcgat ggggcaggcg
     1561 gcggatgccg tcgccggcga catggcggcg ctgcggctgg cgatcgagcg actcgtaccg
     1621 cttccgtagc cataaggtaa ccgccgtatg ccatacggtc gtatcaggca cgtcttcggg
     1681 cgcacgccga ggcaagccag acgtgccgcc gaggcaatga tcggtggatt tggcgtgcgc
     1741 gcggtctctt ctggttgcag gaagcattgc ccgcctcctc accgcaaccg ggaatagacc
     1801 gaccggtaaa accgtttgca gcaggcaggg cgaatgagat tggcgcagtc gttgcgaggc
     1861 ggcaagctgc gctcgctacg gcgaaacagt cggtcgacca ggcaacctgc aaccctgaaa
     1921 ccgccatgac gcggtaacag ttcgcgggtt gccgacctgg cagtccaggt ccgccgcggg
     1981 atacgcaccg gaatttcggc atcagcgcta caacattgcc gacctgcggc gccatctgcg
     2041 acgcatcgat cggccgatca tccggcaaca tatgggtctc aggccatcgt tcgatgatgc
     2101 gaaattcgcc ggcttcccgg ttgccaccac cacggccaat accacatttc atgtattgga
     2161 cggcttcggc cagccggtgc cgattggcgt acctggcgaa ctgtatatcg gcggcaacgg
     2221 tgttgcgcgc ggttacctga accggccaga cctgaccgcc gaacaattca ttgccgatcc
     2281 gttcagtagc gatcacgcgc gattatacaa aacgggtgac cgggtgcgct gctttggtga
     2341 gccgaaacca atcatttctc aaagctcagg atttcctgcc gcccgcgatc aaggcggtgt
     2401 ttgagggcgg cattgcggcc ttgaaccact attgtccccg atgctatccc ggcaaagtgg
     2461 atttcctggt gtgcggatat catacctatc cgccggaagc tccgcgtgcg gtatggggcc
     2521 ggctggtcga gcaacctgaa gttcaatcag tgcccgccga gcatgcgttc actgcttcgg
     2581 ttcatgccga atacgtcgcc aactggctgt tcgaccgggt tcaggaggcg atcgggcagg
     2641 acctcggccc gccagacgcc gagccaatga ccaacggtct cgatgcggcg ccggaacctg
     2701 tgcacagttc ctcgttttag ctgcgaaatc gtatggccga accggtcgcc acgctgttca
     2761 gccaatcgag cgaccacgcc tgataccggc gtggcccaga ctcaatgcat gacccagcgg
     2821 tccaggaaga cgtgtacccg cgcgtaactg tcctcagcgg ccggctggtt atattccatg
     2881 atgtgggagt tgctgaccgt gcgcaccatg ttggggttgt cgaaggcatg gtaaacgcca
     2941 ggataaatat ggatttcaaa gacctgaccc ggcttcaatg cggcgccgaa ttcagtgcag
     3001 cgggtccccg gacgtcccca gtcgtcgccc ccgccgacca gcaccatcag cggcacatcg
     3061 ccgtgcaatt tgggatcgac acagggaccg taatagtcga tggcggcgcg cagatggaac
     3121 cccgcgtagg cacgctgggt cgcgataacc gcggtcgaac cgccgtgcga caagcccaat
     3181 accgcaatcc ggtccgggtc gatctccggt cttgtacgta accatgccgc tgccgagccg
     3241 acatcgccca ccctgtcgtg ccacgtcacc aatccctgag cttccggcgc gcagactcgc
     3301 ttgatgccgc ggggtgtcat gctgtccggg atcagcgccg catagcccca accgttcagg
     3361 cggtgcgccc agatccactg gctggcgcca aggccggcgc aaccatgcag cacaatgaca
     3421 gcagggaagg ggcctgggcc ggcaggaagt ttgagttcgg cagggatcgg gccttgcggc
     3481 atccgcgccc ctggcaccgc aagtggtgga atttgcacgg catccggacc ggaaatcgtg
     3541 accggctgaa agaccgcgtc gatcgcggac ggcgggtcgc aggcacccgc ggacagcagc
     3601 aacagggcga tgatcccaaa ccatttcaaa aaagtaacga caacacggtc cgtgtcccga
     3661 cccacggcgt ttcggttcat ggcgcgaccg aggtcagata gatcgtcgcc tctccgaacc
     3721 accgcgtttc gacggcagca cgtaccggcc aacgaggccc gtcgggggtg acccgcgcca
     3781 gccagatcgt gccgtggtgc ggacgccggt cctgctcacc ccctgcgccg aagcgccagc
     3841 cggccaacgt ctgactggtg aaatcgcagc gcaacgcgtg cccgatgaag tgcaattggc
     3901 cgggagccgg gatagcttcc tcccccaccg tccgcacctc gaatgattgc agatcgcgac
     3961 cgtcgtaggc gcgtgccccg ccgtcgcagc gtccgttctg ttccaccaaa cgcagcagca
     4021 gcacgatcaa actgacctga tcgacagtgc cggcgcgaag tgccacaggg acgtcctcgc
     4081 gttccgtcgc attcggcgga gtgatcgcag tcaccgccgg cgtgccgtca tgccaggtca
     4141 tgtccacgac ccgcgtctgt ccgtgtaaat agccgctcga agtgtaaacc tgaggcgccg
     4201 gccgatcgtt tttgagttcg ccggtgacgg tttcttccag ctggccgcca tcgacgatgt
     4261 tggcgaggcc cgtggtgtgg aagtgcatcg acgcgcggta gccggactcc gacagatcaa
     4321 tgttcagccc ggcgtcggcc accggaacac ccacgacatg cagcgagtag ttcagttgct
     4381 cggcagcggc acgatgcaca gcgagcggcg cgccaagaca cagcaacagg aacatctggg
     4441 ccgcgggttt catccgccca ctctatggcg actacggttg taaggaaatc gtcattgggt
     4501 aaacattcgt gacatgaagc aaaacgtgat cgtacgtgtc ggcggctgca aattatgctg
     4561 cggcgcggca agttcgggac cgtcgcagtg atggcgtcat tgccttgact ccgcagcgag
     4621 gcgccgccta tctg
//
LOCUS       DATAVD010001879         1740 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_925273, whole genome shotgun sequence.
ACCESSION   DATAVD010001879 DATAVD010000000
VERSION     DATAVD010001879.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_925273"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..677)
                     /locus_tag="VHX39_35785"
     CDS             complement(<1..677)
                     /locus_tag="VHX39_35785"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3996561.1"
                     /translation="MRIARYLLAVAVSALVVAAMQSAVCQESKPTIRHHRIEEVVADD
                     SSSPEVDQAEAAMQKNDFAGAESLLQKAVAAKPNDYRAWSDLGYIYNATQRLPQAIDA
                     YKKSVGAKPEVFESNLNLGLLLARQGDNGDAAKYLKAAMQLKPGSNPEEGLSRAWLAL
                     GRVEESTDPQQAAAAYTEAAKLNPISALPHLATASLLEKQKNYDAAVHEYQTAAELDP
                     KSPDAQTG"
     gene            complement(690..>1740)
                     /locus_tag="VHX39_35790"
     CDS             complement(690..>1740)
                     /locus_tag="VHX39_35790"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3996562.1"
                     /translation="IKLVGARAHNLKKVNVAIPLGMLVCITGVSGSGKSTLVHDVLYN
                     ALAAEKGQVTGGPQAQLDRIEGADWIDEVVLVDQSPIGRTPRSNPVTYIKAFDAIREL
                     FASQAESEKRGYAAGHFSFNIPGGRCEVCQGDGTVTVEMQFLADVELVCEECNGTRYK
                     PEVLEIRYHGKNIHEVLNLTVKEALHFFSGVPKIVEKLRVLEEVGLGYLRLGQSATTL
                     SGGEAQRMKLAAHLQPRLRDIGKPRSEVNKRQPRMLYIFDEPTTGLHFDDVSKLLAAF
                     RRLIEAGGSIVVIEHNLDVIKMADWVIDLGPEGGARGGQIVATGTPEAIADEATSYTG
                     QWLSRVLPHDGDRAT"
BASE COUNT          314 a          553 c          501 g          372 t
ORIGIN      
        1 ccggtttggg catcaggaga tttcgggtcg agttcggctg cggtttgata ctcgtgcacg
       61 gctgcgtcgt aatttttctg cttctccagc aggctggcag tggcgagatg cggcagagcg
      121 ctgatggggt tcaacttggc cgcctcagtg taggcggcgg ctgcctgttg cgggtcggtt
      181 gattcctcga cccttcccag ggccaaccac gcccgggata gtccttcctc cggattcgag
      241 ccgggcttca gctgcattgc cgccttcagg tatttggccg catcgccatt gtcgccctgt
      301 cgcgccagca gcaagcccag gttcaggttg gactcgaaga cctcgggctt cgctcctact
      361 gatttcttat aggcgtcgat ggcctggggc aaccgttgcg tggcgttata gatatatccc
      421 aggtcagacc aggcacgata atcattcggc ttggccgcga cagctttttg cagcagcgac
      481 tcagcccccg cgaaatcgtt cttctgcatc gccgcctcag cctggtccac ttccggcgaa
      541 ctgctgtcgt cggctacaac ttcttcgatg cgatgatggc ggatggtcgg cttgctttcc
      601 tggcagacag ccgactgcat cgccgccacc acaagcgccg aaacagcgac cgcaagcaga
      661 tacctggcga tcctcatagg attgcagctt taggttgcgc gatcaccatc gtgaggcaag
      721 actcgcgaaa gccactggcc agtgtatgac gtcgcctcat cggctatggc ttccggcgtt
      781 ccggtagcga cgatctggcc gccacgcgct ccgccctccg gcccgagatc aatcacccaa
      841 tcggccattt tgatcacatc cagattatgc tcgatgacca cgatggaacc acccgcctca
      901 attagacggc ggaaagccgc taacagcttg ctgacatcgt caaaatgcag gccggtggtg
      961 ggctcgtcga agatgtagag catgcgcggc tggcgcttgt tcacctcgct ccgtggcttg
     1021 ccgatgtccc gcaagcgtgg ctgaaggtgc gccgccagct tcatgcgctg cgcctcgccg
     1081 cctgacaagg tcgtcgccga ctgacccagc cgcagatatc ccagaccaac ctcttccagc
     1141 acgcgcaact tctcaacgat tttgggcacg ccggagaaaa agtgcagcgc ctctttcacg
     1201 gtcaggttca gcacttcgtg aatattcttg ccgtgatagc ggatttccag cacctccggc
     1261 ttgtagcgcg tgccgttgca ctcttcgcag accaactcga cgtcagccag aaactgcatc
     1321 tcgacggtga ccgtgccgtc accctggcag acttcgcagc ggccgccagg aatgttgaag
     1381 gagaaatgtc cggcggcgta accgcgcttt tcgctctcgg cctgcgaggc aaacagctcg
     1441 cggatcgcgt cgaaggcctt gatgtaggtc acgggattcg aacgtggcgt gcggccgatt
     1501 ggcgactggt ccaccagcac cacctcgtcg atccagtccg cgccttcgat gcgatccagt
     1561 tgcgcttgcg ggccgcctgt gacctgtccc ttctcagcgg ccagcgcgtt gtagagcaca
     1621 tcatgcacca gcgtggattt gcccgagccc gataccccgg tgatgcatac cagcatgccc
     1681 agcggaatgg cgacattcac cttcttcaga ttgtgagcgc gcgcgccgac aagcttgatg
//
LOCUS       DATAVD010001880         3556 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1850912, whole genome shotgun sequence.
ACCESSION   DATAVD010001880 DATAVD010000000
VERSION     DATAVD010001880.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3556
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1850912"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1151
                     /locus_tag="VHX39_35795"
     CDS             <1..1151
                     /locus_tag="VHX39_35795"
                     /inference="COORDINATES: protein motif:HMM:TIGR03506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein"
                     /protein_id="HEX3996563.1"
                     /translation="AVVAQPDYVNGVQGAITQTDIPLNLAVAGQGFFAVSQQTGQIAG
                     QPTFNPQQFYTRAGDFALNSQGYLVNSSGQFLNGWMPDPVTGVINQNALAPIQVLQTA
                     LNPVATANVNLSANLPATPTAGTATATSPISSNITVYDALGTAHTVSLGWSLNAANDW
                     TVTITVPDAATPDVGTADVQFGPQTSGNAVNPGTVGQIGSTTGTVTSAGFTTGGTATM
                     ALVMDFGSGAQTVNLNLGTYGGAAGLTQYAGTTYDLQGISQDGVPPGSFSGVTTQANG
                     DVVVNYNNGQTRTIAQVPLITFNAPNSLQGQDGQSFTSTIASGNPLADAVNTNGAGSL
                     VVSSVEGSNVDIATEFSQLIIAQQAYAANAKVVTTANNLLESTINMKQ"
     gene            1158..2684
                     /locus_tag="VHX39_35800"
     CDS             1158..2684
                     /locus_tag="VHX39_35800"
                     /inference="COORDINATES: protein motif:HMM:NF018168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod C-terminal
                     domain-containing protein"
                     /protein_id="HEX3996564.1"
                     /translation="MSLTAALSIANGGLKNINAQLSLVSNNVVNASTPDYSVETANQQ
                     SLTGGGQPLGVQTEASTRAIDLALQQAAFQQDTVVSGLTTTTTSLQQLDALQGTPGQG
                     NDLGTLLSNLQSAFTTLLANPASTAQQTAVISAAGNLTAAINTLSNGYTQQRQAAQND
                     IVTQVSSINADLNQIGILSNQIVATQVTGLSVATLQNQRDAVVHSLSNIIGIKTLTQP
                     NGDIIVTTDSGTELPTRGIPNPIQTSGATIGAGSSYAGGSIPAITLGGIDITRQLQGG
                     SLGADIALRDSTLPTFQGELDEFSNSLASQFSAQGLTLFSDPNGNVPAGGGPPVQSTY
                     VGFASEIQVNPAVSADPLLLRDGTQNIAGSPTGASAFTTNPAGGPAGFTTLINRVLDY
                     ALGADAQAGVPQPASNVTGLGPDGTLNAPYAAPLTLAANATSLVSAQAAVSAAATGQL
                     SSGQALQTTLNANVSAVSAVNMDTEMSHMIELENAYGANARIIAAVQAMFTQLQQVIQ
                     "
     gene            2681..>3556
                     /locus_tag="VHX39_35805"
     CDS             2681..>3556
                     /locus_tag="VHX39_35805"
                     /inference="COORDINATES: protein motif:HMM:NF012874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996565.1"
                     /translation="MSGTTSGIGFPVLGQLMAGLIRTNKTFDTLTNQASSGMIANTYA
                     GLGATASVALSLGPEIDSLTTAQSNIAAASGPAQVTQTAMTQIGSIAANLLAEMPNLT
                     NLDSGEVDSIAANARSALVQVGELLNSDYNGVYVFAGQDSANPPVPDPGQITSSGFYT
                     QISAAVTNLTINGAAATVVTTLGIASSTVAGTSPLSATYLAQPAASLTPPLVATGDGQ
                     SQSLGLLAGSNIGPISTGTSTTGSYMLDLMRALATVGSLSSSQATDPNFAALVSDTQT
                     SVTGAITAMNTDVGIL"
BASE COUNT          750 a         1151 c         1040 g          615 t
ORIGIN      
        1 gcgcggtcgt cgcgcagccg gattacgtga acggtgtgca aggggcgatc acccagaccg
       61 acatcccgct gaacctcgcc gtggccggtc aggggttctt cgcggtgtcg caacagaccg
      121 gccagatcgc cggccagccg acgttcaatc cgcagcaatt ctacaccaga gccggtgatt
      181 tcgcgctcaa cagccaaggc tatttggtca acagctcggg ccagttcctg aacggctgga
      241 tgcccgaccc ggtgaccggc gtcatcaacc agaacgccct ggcaccgatt caggtcttgc
      301 agaccgcgct caatccagtg gccacggcga acgtcaatct gtccgcgaac cttccggcca
      361 cgccgaccgc cgggaccgcc accgccacat ccccgatcag ctccaacatc accgtctacg
      421 acgctctcgg caccgctcac accgtttcac tgggctggtc gctgaacgcg gcgaacgact
      481 ggaccgtaac gatcaccgtg ccggatgccg ccacgcccga cgtcggcacc gccgatgtgc
      541 agttcggacc gcagaccagc ggcaacgccg tcaatcccgg gaccgttggc cagatcggtt
      601 cgacgaccgg gaccgtcacg tccgccggtt tcaccaccgg aggcacggcc acgatggcgt
      661 tggtcatgga tttcggctcg ggagcgcaga cggtcaacct caatctcgga acctatggcg
      721 gtgccgcggg tctgacgcag tatgccggga ccacctacga tcttcagggg atcagccagg
      781 atggcgtgcc gcccggcagc ttttccggag ttaccacgca ggccaatggc gatgtggtgg
      841 taaactacaa caacggccag acccggacga tcgcccaggt gccgttgatt accttcaatg
      901 cgccgaattc gttgcaggga caggacggtc aatcgttcac ctcgaccatc gcttcgggca
      961 acccgctggc ggacgcggtg aacaccaacg gcgccggcag tcttgtggtc agttcggtcg
     1021 aaggctccaa cgtcgatatc gccaccgagt tctcgcaatt gatcatcgcc cagcaggcct
     1081 atgcggcaaa tgccaaggtg gtgaccacgg cgaacaacct gttggaatcg accatcaaca
     1141 tgaagcagta atccgccgtg agtctgaccg ctgccctgtc gatcgccaat ggcggcctca
     1201 aaaacatcaa cgctcaactg agcctggtat cgaacaacgt cgtcaacgcg agcacgcccg
     1261 attacagtgt cgaaacggcg aaccagcaaa gccttaccgg cggcgggcaa cccttgggcg
     1321 tgcagaccga ggcgtcgaca cgcgccatcg atttggctct gcaacaagcg gccttccagc
     1381 aggacaccgt ggtatccggg ctgaccacca ccacaaccag cctgcaacag ctcgatgcgc
     1441 tgcaaggcac gccaggccaa ggcaacgacc tcggcacact cctgagcaac ctgcagagcg
     1501 cgttcaccac acttctcgcc aatccggcga gcacggcaca acaaaccgcg gtgatctcgg
     1561 cggccggcaa cctgacggca gcgatcaaca ctctcagcaa tggctacacg caacagcgtc
     1621 aggcggcaca gaacgatatc gttacgcagg tgtcgagcat caatgcggat ttgaaccaga
     1681 tcggcatcct gagcaaccag atcgtcgcca cccaggtgac cggcctttca gtcgcgacac
     1741 tgcagaatca acgcgacgcg gtggtgcatt cgctcagcaa catcattggc atcaagacgc
     1801 tgacccagcc aaatggcgac ataatcgtaa ccaccgactc cgggacggag ctgccgaccc
     1861 gcggaattcc aaacccgata caaacctccg gcgcaacgat cggagcgggc tcctcatacg
     1921 ctggcggcag cattccggcg attaccctgg gcggcatcga tatcaccagg caattgcaag
     1981 gcggcagtct tggggccgac attgccttgc gcgattccac cttgccgacg tttcagggcg
     2041 aactcgacga gttttcgaat tcgctcgcat cgcagttcag cgcgcaagga ttgacgttgt
     2101 tcagtgatcc gaatgggaac gtgccggcgg gcggcgggcc gccggtgcag tcgacctatg
     2161 tcgggttcgc gtccgagatc caggtcaatc ccgcggtttc cgcagatccg ttgctgttgc
     2221 gtgacggcac acagaatatc gcgggttcgc ccaccggcgc gtcggcattc accaccaatc
     2281 cggcgggtgg accggcaggg ttcaccacgt tgatcaaccg cgtgctcgac tatgcattgg
     2341 gcgccgacgc acaggccggc gtgccgcagc cagcgagcaa tgtgacggga cttggaccgg
     2401 acggcacgct caacgcaccc tacgccgcgc cgctgacgct ggccgccaac gccacgtcct
     2461 tggtctcggc gcaagcggcg gtcagcgctg cggccaccgg ccagttgagt tccgggcagg
     2521 cactgcagac cacgctgaac gccaacgttt ccgcggtttc cgccgtgaac atggataccg
     2581 aaatgtcaca catgatcgag ctggaaaacg cctatggcgc gaacgcccgg atcatcgccg
     2641 ccgtgcaggc gatgttcacc cagttgcagc aggtgatcca atgagcggca ccacttccgg
     2701 tatcggcttt ccggtactgg gccaactgat ggcaggcctg atccggacca ataaaacctt
     2761 cgatacgctg accaatcagg ccagcagtgg catgatcgca aacacctatg ccggtcttgg
     2821 cgccaccgcc tcagttgcgc tgtctctggg cccggaaatt gacagcctga cgaccgccca
     2881 aagcaacatc gccgccgcga gcggaccggc gcaggtcacg caaacggcga tgacgcaaat
     2941 tggctcgatc gcggcgaacc tgctggcgga gatgcccaat ctcaccaatc tggattcggg
     3001 tgaggtggac tcgattgccg caaacgcacg gagcgcgctg gtccaggtcg gggaattatt
     3061 gaatagtgat tacaatggtg tatacgtatt tgcgggtcag gattcggcga accctccggt
     3121 gcctgatccg ggtcagatca cctcgtcagg cttttatacg caaatctctg ctgcggtaac
     3181 caatctgacg atcaatggcg cggcagcgac ggttgttacg actctgggga tcgcgagttc
     3241 gacggtcgcc ggcacctcgc cgctgtcggc gacttatttg gcgcaaccgg ccgccagcct
     3301 gacgccgcca ttggtggcga ccggtgacgg acaatcgcaa tcgcttggct tgctggcagg
     3361 cagcaatatc ggtccgattt cgacgggaac ctcgaccaca ggttcctata tgctcgatct
     3421 gatgcgagca ctggcgacgg tcggatcatt gagcagcagt caggcgacag atcctaactt
     3481 tgccgcattg gtgtctgaca cacaaacgag tgtgactggc gcaataaccg caatgaatac
     3541 agacgttggt attttg
//
LOCUS       DATAVD010001881         1813 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2970604, whole genome shotgun sequence.
ACCESSION   DATAVD010001881 DATAVD010000000
VERSION     DATAVD010001881.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1813
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2970604"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..234)
                     /locus_tag="VHX39_35810"
     CDS             complement(<1..234)
                     /locus_tag="VHX39_35810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996566.1"
                     /translation="MTHLPPFDDADLFDEAGYLRLYPGIAEAMMQGAVDTAWNHYANH
                     GRHEGRLPNDVDPAFYLAAYPAIEQDLGHSPTAG"
     gene            420..1247
                     /locus_tag="VHX39_35815"
     CDS             420..1247
                     /locus_tag="VHX39_35815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007425025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX3996567.1"
                     /translation="MHADSFACGPAGPIPTPGRGDCPDSVVLAIAEAPMLDPATGMAQ
                     SGLMSIIMHDLAGADPELRFSPYCWRTRFALAHKGLPVETTPWRFTETDAIAFSGQAR
                     VPVIRDNDRVVFDSWSIAEYLEETYPALPIFNGPGGRAHALFINSWADSVLLGGIARF
                     IVRDLLDVVDPKDRSYFRTSREARFGMSLEAVQAGRDDRVAAFRDMLLPIRLVLRRQK
                     WLGGATPSYADHIIAGTLMWPRCASRFALLASDDPVAEWFGRMLDQYGGLGCNAKTP"
     gene            1248..>1813
                     /locus_tag="VHX39_35820"
     CDS             1248..>1813
                     /locus_tag="VHX39_35820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEX3996568.1"
                     /translation="MAERFQRLRVAGLRRTTADAVVVSFDTPAAFRRFTPGQYLTLRT
                     TIDGQDVRRCYSICSGLDEPMLQVGIKQLPGGLFSTWANTVLREGDTLLVMRPEGNFG
                     VPIEPAKSRVLAGFAAGSGITPILSIVKSVLARESASRCFLFFGNRATSDIMFRDELE
                     DLKDRYLSRLSVFHVLSREQQELDILNG"
BASE COUNT          307 a          541 c          589 g          376 t
ORIGIN      
        1 gcctgccgtg ggactatggc cgagatcctg ctcgatcgcc ggatatgccg cgagatagaa
       61 tgccggatcg acgtcgttgg gcagacgtcc ttcgtgccgg ccatggttgg catagtggtt
      121 ccacgcggtg tcgaccgcgc cttgcatcat tgcctcggca atgcccgggt acaggcgcag
      181 ataccccgct tcgtcgaaca aatcggcgtc gtcgaacggc ggcaggtgtg tcaccaccgg
      241 gtcccttctg aaacgatgcg cggcgctacc atgaccggtc gcccaggggc aatcaccggc
      301 gacggcgtgg tcagggcaat cgtttgaaca gggattggat ttcaggcgtc gcgggttggc
      361 ggttgcaccg gccagaagga aggatttcta acgcggataa ggtgaggcga taagccagga
      421 tgcacgccga ttccttcgct tgcgggccgg ccgggccaat tccgacgccg ggtcgtggcg
      481 attgccctga cagcgtggtc ctggcaattg ctgaggcacc gatgctggac ccggcaacgg
      541 gaatggcgca atctgggctt atgtccatca tcatgcatga cctcgccggc gccgatccgg
      601 agcttcggtt cagcccctat tgctggcgca cgcgtttcgc gttggcgcac aaaggcctac
      661 cggtcgaaac cacgccgtgg cggttcaccg agactgatgc gatcgcgttt tccggtcagg
      721 cgcgagtgcc ggtcatccga gacaacgaca gggtggtatt cgacagttgg tcgatcgccg
      781 aataccttga ggagacttac ccggcactgc cgattttcaa cggtcccggt ggccgtgccc
      841 acgctttgtt catcaattcc tgggccgatt ccgtgctgct cggcggtatc gcgcgtttca
      901 tcgtacgtga cctgctggac gtagttgatc ctaaggaccg gagttacttc cgcaccagcc
      961 gggaagctcg gttcggcatg tcgctggagg cagtccaggc cggccgcgac gatcgggtgg
     1021 cggcgtttcg cgatatgcta ctgccaattc gcctggtgct gcggcgccag aagtggttgg
     1081 gtggtgcaac tcccagttac gccgatcata ttatcgcggg aaccttgatg tggccgcgtt
     1141 gcgccagccg atttgcgtta cttgccagtg acgacccggt agcggaatgg ttcggccgta
     1201 tgctggatca gtacggcggt ctgggctgca acgcaaagac tccttgagtg gcggaacgct
     1261 tccagcgttt acgcgtcgcc ggcctgaggc ggacgacagc cgatgcggtg gtggtgagtt
     1321 tcgacacgcc ggctgcgttc cgccgtttca cccccggcca gtatttgacg ttacgcacaa
     1381 cgatcgatgg ccaggatgtc cggcgctgct actcgatttg ttccggcctc gacgaaccca
     1441 tgctccaggt cggcatcaag cagcttcccg gcggactgtt ctccacctgg gccaacaccg
     1501 tattgcgtga gggcgacacg ctgctggtca tgcgtccgga gggaaatttc ggcgtgccga
     1561 tcgaaccggc caaatcgcgg gtgctcgccg gtttcgccgc gggttccggc atcacgccga
     1621 tcctgtcgat cgtgaagagt gtgctggcgc gcgagtcagc cagccggtgc ttcctgttct
     1681 tcggcaaccg cgccaccagc gacatcatgt tccgggacga actcgaggac ctgaaggacc
     1741 gatatttgtc gcgcctgtcg gtgtttcacg tgctgtcgcg tgagcagcag gaactggaca
     1801 tcctgaacgg tca
//
LOCUS       DATAVD010001882         3199 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_362973, whole genome shotgun sequence.
ACCESSION   DATAVD010001882 DATAVD010000000
VERSION     DATAVD010001882.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3199
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362973"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..591)
                     /locus_tag="VHX39_35825"
     CDS             complement(<1..591)
                     /locus_tag="VHX39_35825"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3996569.1"
                     /translation="MKQQLHFGAFLYTPGTHSAGWRHPAAEPRTDMHFPYYVEMARTA
                     ERGKLDTIFLQDTAAIGGSGGLDGNSPYRPSQGRQVHLEPVSLIAALAAVTSHIGLIS
                     TATTTYNEPYNIARRFATIDHISGGRAGWNLVTSQVEDEAGNFGLERHVDHAERYERA
                     SEFYDVVAGLWDSWEADAFLRDKASGVWFDFDKMHFL"
     gene            complement(638..2041)
                     /locus_tag="VHX39_35830"
     CDS             complement(638..2041)
                     /locus_tag="VHX39_35830"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEX3996570.1"
                     /translation="MQELEFLTIAEASQLIASRQLSPVELTEAYLARIEALDHLLDSF
                     VTLTADRARAEAKAAEATITASGPVSRMHGIPYCLKDIFETAGIRTTAMSKLLADNVP
                     TQDSFCGEKLVAAGGVLLGKTATWEFAHGGPSWDVLFPPARNPWNPAYSPAGSSSGSG
                     AAVAAGFAPATLGSDTGGSIRGPAAACGIAGLKPTYGLVSRRGVLPNCFSHDHAGPLA
                     WTSEDLAILMQVIAGHDPQDPGSAKVPIPDYTAALTGKVKGLVIGVPENWLEEDKPTQ
                     ATLAAFEAALEVLCGLGCSVRPVQLPPLQQFDDAKKTIAVAELFAIHGKDLRTRPELF
                     GASLRFRIIAGGLVRAEEYINAMRLRTDLARAMQTVMETVDVLMLPTGEPAGKLEPVP
                     HSSLFTRASFTTPFNVGGNPALSVCCGFADNGLPFSLQIAGRLFDDATVLRVGDAYEK
                     ATPWRTTRPVLAVTETA"
     gene            complement(2045..2248)
                     /locus_tag="VHX39_35835"
     CDS             complement(2045..2248)
                     /locus_tag="VHX39_35835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996571.1"
                     /translation="MSATPSDDEIVLLARQAGLDLPPEYLPDLIEAYGHVRRMIDRLP
                     FGRPRGDEPAHVFVPGKFQPAGE"
     gene            2579..>3199
                     /locus_tag="VHX39_35840"
     CDS             2579..>3199
                     /locus_tag="VHX39_35840"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HEX3996572.1"
                     /translation="MTEYVWDKFLTERDKAVFAAAGFGALAGFGKRPALLVIDVNWLF
                     CGDKPEPILDSIKRWRSSCGEESWVAVEYIRQLVGAARAKALPVIYTTNYYRAGDNWD
                     AGSWRWKNRRRDEDRTVSQSNLDPSEIVAPIAPGPRDIVIHKQKPSGFFGTNLASYLT
                     LLGCDSVVITGTTTSGCVRATAVDAFSLNYRVALAEEGCFDRSQASH"
BASE COUNT          610 a         1020 c         1003 g          566 t
ORIGIN      
        1 caggaaatgc atcttgtcga aatcgaacca aacgcccgac gccttgtcgc gcaggaacgc
       61 atcggcttcc caactgtccc acaatccggc gaccacgtcg tagaattcgc tggcgcgttc
      121 atagcgttcg gcatggtcga cgtgccgttc gaggccgaaa ttgccggcct cgtcctcaac
      181 ctgcgaggtg acgaggttcc aaccagcgcg gccgccgctg atatggtcga tcgtggcaaa
      241 gcggcgggcg atattgtacg gttcgttgta agtcgttgtc gcagtcgaga tcagcccgat
      301 atgcgaggtc actgccgcca gtgcggcaat caggctgacc ggttccagat gcacctgacg
      361 gccttgcgac ggccggtatg gactgttgcc atccaacccg ccgctgccgc caatcgcagc
      421 cgtatcctgc agaaagatcg tgtccagctt gccgcgttcg gcggtccggg ccatttcgac
      481 atagtacgga aaatgcatgt cggtgcgcgg ttccgcagca ggatgccgcc agcccgcgct
      541 atgggttccc ggcgtgtaaa gaaaagcgcc gaaatgcagt tgttgtttca tctcgcctcc
      601 acgggccgcc ccaggggacc gacggaggca aatcgaatca cgccgtctcc gtcaccgcaa
      661 gcaccggccg tgtggtgcgc cacggcgtgg ccttttcgta agcgtcgcca acccgcaaca
      721 ccgtcgcatc gtcgaacaac cggccggcga tctgcaacga aaacggcagc ccattgtcgg
      781 cgaaaccaca acacacggac aacgccggat tgccgccgac gttgaatggc gtggtgaagg
      841 acgcgcgagt gaacagcgac gagtggggga ccggctccaa cttcccggcc ggctcgccgg
      901 tcggcagcat cagcacatcc acagtctcca tcacggtttg catggcccgc gccagatcgg
      961 tgcgcaatcg catcgcattg atgtattctt cggcgcgcac cagaccgccg gcaatgatcc
     1021 ggaaccgcag gctggcgccg aacaactccg gccgcgtgcg cagatccttg ccgtgaatgg
     1081 caaacaattc tgctaccgca atggtcttct tggcatcgtc gaattgctgc aacggcggca
     1141 gctgcaccgg ccggaccgaa cagccgagtc cgcaaagcac ctcgagcgcg gcttcgaatg
     1201 cagccagcgt ggcctgggtt ggcttgtcct cctccaacca gttttccggc acgccgatga
     1261 cgaggccttt gaccttgccg gtcagcgccg ccgtgtagtc cgggatcggc actttggccg
     1321 aaccgggatc ttgcggatcg tgaccggcga tcacctgcat caggatggcg aggtcctcgc
     1381 tggtccaggc cagcgggccg gcatggtcat ggctgaagca attcggcagc acgccacgcc
     1441 ggctgaccag cccataggtc ggtttcaggc cggcgatgcc gcaggccgcg gcgggccctc
     1501 ggatcgagcc gccggtgtcg ctgcccaacg tcgccggcgc aaaccctgcc gcgaccgcgg
     1561 cacccgagcc cgacgatgag ccggccggcg aatacgccgg gttccacggg ttgcgcgccg
     1621 gtgggaacag cacgtcccag gatggcccgc catgggcgaa ctcccaggtg gcggtcttgc
     1681 ccaacagcac gccgcccgcc gccaccagct tctccccgca gaacgaatct tgcgttggca
     1741 cgttgtctgc cagcagcttc gacatcgcgg tggtgcgaat gcccgcagtt tcgaaaatgt
     1801 ccttcaggca atacgggatg ccatgcatgc ggctaacagg accgctcgcc gtgatggtgg
     1861 cttcggccgc cttcgcttcg gctcgggcgc ggtccgcggt cagcgtgacg aaactgtcca
     1921 gcagatggtc caatgcctcg atgcgggcaa gataggcttc ggtcaattcg accggcgaca
     1981 attgtcgcga tgcgatcaac tgtgacgctt cggcgatggt gagaaattcg agttcctgca
     2041 tgggtcattc tcctgccggc tggaactttc ccggcacgaa cacatgcgcc ggttcatcgc
     2101 cgcgcggccg cccgaagggg agacggtcaa tcatgcgcct gacatggcca tacgcctcga
     2161 tcaggtccgg caaatattcc ggaggcagat cgagaccggc ctgccgagcc agcaaaacga
     2221 tttcgtcgtc ggatggcgta gcgctcatgc ggaaaactcc gggtttgcgg cgtggtgcgc
     2281 gtccggctgt aacggcggcg cgctgagatc cacgataata ccccttggcc atgccgggtt
     2341 gatccggggt tgcctaagga ggaagcaaga ccggtgccag gcgccgatca gtggtttgac
     2401 gcgccgggcc gcatcgtgat tgcgaacctg ccggccagaa attcaggcca cgttggccta
     2461 taattcaggc actaacgatc agagtgctgc agggtcttcg aaaagtcctg cccaaacagg
     2521 tggcacatgg gttgcacggc agcccattgc gcatacggcg accgaaggag gccaggacat
     2581 gaccgaatat gtgtgggaca aattcctcac cgagcgtgac aaggcagtgt tcgccgccgc
     2641 cgggtttggc gcactggcag ggttcggcaa acggcccgcc ctgttggtga tcgacgtcaa
     2701 ctggctgttt tgcggcgaca aaccggaacc catcctggac agcatcaaac gctggcgcag
     2761 ttcctgcggc gaggagagct gggttgcggt cgaatatatt cgccaactcg tcggtgccgc
     2821 gcgggccaag gcgctgccgg tgatctacac gaccaactac taccgcgccg gggataactg
     2881 ggatgccggt agctggcgct ggaagaaccg ccgccgcgac gaggatcgta cggtgtcaca
     2941 atctaacctc gatccttccg aaatcgttgc tccgattgca ccagggccgc gcgacatcgt
     3001 gatccacaag cagaagccat cggggttctt cggcaccaat ctggcgtcct atttgacgct
     3061 gctcggctgc gacagtgtgg tgatcaccgg caccacgacc tcaggctgcg tgcgcgccac
     3121 agcggtcgac gcgttcagcc tgaattaccg cgtggcactg gccgaggaag gttgcttcga
     3181 tcgcagccag gcgagccac
//
LOCUS       DATAVD010001883         8883 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_925635, whole genome shotgun sequence.
ACCESSION   DATAVD010001883 DATAVD010000000
VERSION     DATAVD010001883.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8883
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_925635"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1395
                     /locus_tag="VHX39_35845"
     CDS             <1..1395
                     /locus_tag="VHX39_35845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEX3996573.1"
                     /translation="PYSMYPRTSAIEANQIVNLVGGPYSTPHYRARTRVVFQNKTPMC
                     QYRGVGHPIACSVTEGLVDLAARAIGMDPVEIRRRNLVPDDAYPCASPTGMRFESLSH
                     HASLDKLLAMMDYDALRSDQASSRMNGIHRGIGLASFVEITNPSAAFYGVGGARISSQ
                     DGVALRLDAAGTIVCQTSVTEQGQGAEAVTAQVVATALGVKLADVRVMSGDTDITPYG
                     GGTWASRAAGIGGEAAWQAGKQLRLNILEVAASILQTRVEAMDIRDGRVVDADTLTER
                     LTLAELARIAYFRPDTLPPGFQAELMAVRHYVPRAYPFAFTNGVQASYLEVDPDTGMI
                     RLLGHWVVEDCGTILNPQLVDEQVRGGVVQGLGAALFEHCRYDERGQMLNASMADYLV
                     PMAAEMPDIAVGHVVSPTADSELGAKGAGEAGTAGAAAAVANAVNDALASFGVTISEI
                     PLTPEVILRALGHI"
     gene            1534..1905
                     /locus_tag="VHX39_35850"
     CDS             1534..1905
                     /locus_tag="VHX39_35850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996574.1"
                     /translation="MSSASLRVIAASCLFFAGPVPLHAAPPPDADPGLAPWFRSLHQP
                     QTNMSCCDRSDCRTVRYRIVNGHFQAFIGGEFARWQDPPYAWVDVPDDSVLHRHDNPT
                     GEGVACWGGTKIICFVEGTGA"
     gene            1981..2865
                     /locus_tag="VHX39_35855"
     CDS             1981..2865
                     /locus_tag="VHX39_35855"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEX3996575.1"
                     /translation="MTDPQKPSQRLEYQASIDRPKLSLPDGKRVVVFLVVNIERWDID
                     RTMPRQVLSPPQGATVIPDVPNWAWHEYGMRVGFWRLKAALDLHGIAPTLAINGVVPS
                     AYPRVTDACRDAGWEFMVHGYHQMATHLVEDQRAMIRDAIAALRKAGGHDPVGWLAPG
                     LTETLDTPDLLAEAGIKYCADWVVDDLPATIQTTHGPMLTMPYSVELNDIPMMMIQHH
                     RAEELFDRTIAQFERLHEESGEQGAKVMGLAVHPYISGVPHRIGWFERALAHMASRPG
                     TVFWQGRQIMDWYQKATA"
     gene            2862..3689
                     /locus_tag="VHX39_35860"
     CDS             2862..3689
                     /locus_tag="VHX39_35860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3996576.1"
                     /translation="MSFMTKWGLLSQGERDAAYNNTSHVVDSAVLNAARESASSAFRA
                     ANGMHLDLRYGARERNTWDLFPTSDPDAPCIVFIHGGYWQRNSKEQFANLIAGPHARG
                     WAAALPGYTLAPDASLTEIVAEINAALDWLAMHGPAHGINGPVVLSGWSAGGHLTAMC
                     LGHSLVKAGLSISGLFEMGPIRDTYLNERLRLTEQEIVALSPMRLPLVDKPLALAYGT
                     AELPPLMSDSRDLHALRSAAHLPGALIPVPHANHFTIVHELRDPDGILTRHLPLLLR"
     gene            complement(3710..4000)
                     /locus_tag="VHX39_35865"
     CDS             complement(3710..4000)
                     /locus_tag="VHX39_35865"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase family
                     protein"
                     /protein_id="HEX3996577.1"
                     /translation="MAVRLVVTINAAPGKGAELARVFRDRCAEVRQEPGCEQFEVFQS
                     ALDPDKLTLLELWTDQAALDVHAKVNATRTPLPPGLRIGAGEREDYQYNRTR"
     gene            complement(4060..4548)
                     /locus_tag="VHX39_35870"
     CDS             complement(4060..4548)
                     /locus_tag="VHX39_35870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996578.1"
                     /translation="MRGALVIGMVVLSLGAASAQPPPPGYAYPPPGYPPPGYPPPGYP
                     PPGYPPPGYAPPVYPVDPYAGIYPGYAFNDGAPTLLVAGVVFPLILVGGAWGYWDGGH
                     RWIRAPDTVYRHLEGRRAAGVVFRVGGPAHAFHGAPGRPEFHPGGGGRPMEHERGHER
                     GH"
     gene            complement(4633..5238)
                     /locus_tag="VHX39_35875"
     CDS             complement(4633..5238)
                     /locus_tag="VHX39_35875"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxychromene-2-carboxylate isomerase"
                     /protein_id="HEX3996579.1"
                     /translation="MQVEFHFDFGSPNAYLSHRVIPAIEARTGARFRYMPVLLGGVFK
                     ATGNRSPAEAFAGIRNKPDYERLETERFIRRHRIEGFVRNPFFPVNTLQIMRGAAAAE
                     IDGCLERYVHAIFHHMWEAPKKLDEPDVLRDALTASGLDAESVMARTQDPAVKVRLIA
                     NTEMSVARGAFGSPTFFVGDAIYFGKDRLRDVEEAILGVAG"
     gene            5370..5828
                     /locus_tag="VHX39_35880"
     CDS             5370..5828
                     /locus_tag="VHX39_35880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEX3996580.1"
                     /translation="MQRKSFSTMQCPIARGLEHVGEWWSILILRDAFRGLTRFDEFSE
                     SLGIAPNMLTRRLNALVEAGLLARQRYNERPPRDEYVLTQRGRDFRPVMLAMMAFGNK
                     HFPPDDRTVQIVNIENGQAVDPLLLDPTTGREVAGPGYRVVTTMLRDAAA"
     gene            5825..6319
                     /locus_tag="VHX39_35885"
     CDS             5825..6319
                     /locus_tag="VHX39_35885"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEX3996581.1"
                     /translation="MIRERTFAWSDPRVTAEAGRRMAGLDLMLAWLNGSVPAPPISAL
                     VGLSVAEVEAGRIVMRLTPAEYHYNPIGTMHGGILATLLDSVMGCAVHSTLPKGRAYT
                     SLEIKVNYVRAVTDESGELTAEGTLVHGGRRSAVAEGKVLDAKGRLCATASTTCLVFD
                     LPAA"
     gene            6319..7521
                     /locus_tag="VHX39_35890"
     CDS             6319..7521
                     /locus_tag="VHX39_35890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010668823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03862 family flavoprotein"
                     /protein_id="HEX3996582.1"
                     /translation="MTLKAAVVGAGPAGLMAAEVLARGGLTVTVYDQMPSVGRKLLMA
                     GRGGLNLTHAEPLPVFLSRYGAARAWLEPIIAAFPPDVLIAWCSNLGQPTFVGSSGRV
                     FPTAMKASPLLRAWLRRLAELDVAFRVRHRWAGWDAAGNLRFDTANGMVDHRSDVAVL
                     ALGGASWPRLGSDAGWAAHLPDLLTPFQPANCGFLVDWSVHFRTRFAGRPLKRLAVRL
                     GPDTVRGEAMITEAGIEGGVIYALSARLRDAIGVEGFATINLDLRPDISEAVLQDRLG
                     GPRRGQSLANTLRKQAGLSPEAIGLVQEALHHGALPDNLPRLIKSLPVRLTAPASIDR
                     AISSAGGLRAESLDASLMLRHRPGVFAAGEMLDWEAPTGGYLLQACISTGVAAANGAL
                     AWVAHRGG"
     gene            complement(7605..7853)
                     /locus_tag="VHX39_35895"
     CDS             complement(7605..7853)
                     /locus_tag="VHX39_35895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008614840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDGSH iron-sulfur domain-containing protein"
                     /protein_id="HEX3996583.1"
                     /translation="MSESLPIVAQKGSYKIEVEAGKSYWWCACGKSGKQPFCDGSHKG
                     STFAPMKFDAEESGIVSFCGCKGSSKSPRCDGSHKNLP"
     gene            complement(7866..>8883)
                     /locus_tag="VHX39_35900"
     CDS             complement(7866..>8883)
                     /locus_tag="VHX39_35900"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX3996584.1"
                     /translation="ALRALPDGEAEFADIFDGDGVIAPNETEDQTFKVCIKVTKRGDT
                     VAVDFAGSDPAVAGPMNAPLTVTASGVYCALKMIVDPKSLIPPNSGCWRPVTVTAPAG
                     SVVNARHPSPVVYANHEISHRVADMVMAALFAITPRTVMAGSQGTSAVITFGGVDYRN
                     GDRFVSYESVKGGFGARPNKDGINAVASTVSNMSNTPIEILEMSFPLRVEEYSLVPDS
                     GGAGTYRGGLGVRRVWRVLANQAHAAVCCERTVTPPFGLSGGLAGAPAVLQLIEPHTN
                     ARKLTSKGGFLAPAGSLVVMEAPGSGGYGPPSERDKAALCEDLLDGYVTPAKARSIYG
                     VQSA"
BASE COUNT         1515 a         2668 c         2989 g         1711 t
ORIGIN      
        1 ccttattcga tgtatccgcg taccagcgca atcgaggcca atcaaatcgt gaaccttgtc
       61 ggcggcccgt actcgacgcc gcattatcgc gcccggaccc gcgtcgtgtt tcagaacaag
      121 acgccgatgt gccaataccg cggtgttggg cacccgatcg cctgttcggt caccgagggg
      181 ctggtcgatc tggccgcccg ggcgattggc atggatccgg tggaaatccg caggcgcaat
      241 ctggttccgg acgatgccta tccctgcgcg tcgcccaccg gcatgcggtt cgaatcgctg
      301 tcgcatcatg cgtcgctgga caagctgctg gcgatgatgg attacgatgc gctgcggtcg
      361 gatcaggcct catcgcggat gaacggcatt catcgcggta tcggtctcgc cagctttgtc
      421 gagatcacca acccctcggc ggcattctac ggcgtcggtg gcgcgcgtat atcgtcgcag
      481 gacggcgtgg cactgcggtt ggacgcggcc ggaacgatcg tctgtcagac cagtgtgacg
      541 gaacagggcc agggtgccga ggcggtgacc gcccaggtgg tggcgaccgc cttgggcgtg
      601 aaactggcgg acgtgcgggt gatgtccggc gatacggata ttacgccata tggcggcggt
      661 acctgggctt ctcgcgccgc cggcatcggc ggggaagccg cgtggcaggc aggcaagcaa
      721 ctgcggctga acattctgga agtcgcggca agcattctgc aaacccgtgt ggaagcgatg
      781 gatattcgcg acggccgggt ggtggatgcg gacacgctga ccgaacgcct gaccttggcg
      841 gaactcgcgc ggatcgctta tttccggccg gacacgctgc cgcccggttt ccaggccgag
      901 ctgatggctg ttcggcatta tgtgcctcgg gcttatccat ttgccttcac caatggtgtt
      961 caggccagct atctggaggt cgatccggac actggaatga tccggctgct tggtcactgg
     1021 gtcgtcgaag actgcggaac gatcctgaac cctcagcttg tcgatgagca ggtgcgcggc
     1081 ggtgtggtgc agggtctggg cgcggcgttg ttcgagcact gccgctacga cgagcgcggc
     1141 cagatgctga acgcgagcat ggccgactac ctggtgccga tggccgccga gatgccggat
     1201 atcgcggtcg gccacgtggt atccccgacg gcggacagtg aacttggggc gaagggcgcg
     1261 ggcgaggccg ggaccgcggg cgcggcggcg gcggtcgcca acgcggtcaa cgacgccttg
     1321 gcctcgttcg gggtgacgat ctcggaaatt ccgctgacgc cggaggtgat tctgcgcgcg
     1381 ttggggcaca tttgagcgtt cgaagggttt ccggcgccga tttcacgggg acttgaacgc
     1441 gcggtgtcga gacgcctctg gcgttgtcgc tgtccaccat ccacggttgc ggactgagcg
     1501 tctggaacca gagagaggtc tgcgatgacc ccgatgtctt ccgccagctt gcgcgtgatc
     1561 gccgcatcgt gcctgttttt cgccggccct gtaccgctgc atgccgcgcc accgccggac
     1621 gcggaccctg gtctggcacc gtggttcaga agcctgcacc agccgcaaac caatatgtca
     1681 tgctgcgacc gctcggactg ccggacggta cggtaccgta tcgtgaatgg ccactttcag
     1741 gccttcatcg gcggcgagtt cgcgcgctgg caggatccgc cctatgcctg ggtcgatgtt
     1801 ccggacgaca gtgtgctgca tcggcacgat aatcccactg gcgaaggtgt cgcctgctgg
     1861 ggcggcacga aaatcatttg cttcgtggag gggacagggg cttgaggtgc cccaataacg
     1921 tggggaatta ctttcgatgc ccggcttgaa cgaaccgctg gcccccgtca tcatcgtcgc
     1981 atgacagacc cacaaaagcc gtcccagcgc cttgagtacc aggcctccat tgatcgtcca
     2041 aagctgtcgc tgcccgacgg caaacgcgtc gtcgtcttcc tggtggtgaa tatcgagcga
     2101 tgggacatcg accgtaccat gccgcggcag gtgctgagcc ctccgcaagg cgcgacggtg
     2161 atcccggacg tgccgaactg ggcgtggcac gagtatggga tgcgggttgg gttctggcgg
     2221 ctgaaggcgg cgttggatct tcacggcatc gcgccgacgc tggcgatcaa cggggtggtg
     2281 ccttcggcgt atcctcgggt cacggacgcc tgccgcgatg cggggtggga gttcatggtc
     2341 catggctatc accagatggc gacgcatctg gtcgaggacc agcgtgccat gatccgcgac
     2401 gctatcgcag cgttgcggaa agccgggggg cacgatcctg tgggatggtt ggcgccaggc
     2461 ctgaccgaaa ccctggacac acctgatctg ctggcggaag cagggatcaa atattgcgcg
     2521 gactgggtgg tcgatgacct gcccgccacg atccagacga cgcatgggcc aatgctgacc
     2581 atgccgtaca gcgttgagct gaacgacatc ccgatgatga tgatccagca tcatcgggcg
     2641 gaggaattat tcgatcgcac gatcgctcag ttcgagcggc tgcatgaaga gtccggtgag
     2701 caaggtgcca aggtcatggg gttggcggtg catccgtata tcagtggggt gccgcaccgg
     2761 attggctggt tcgagcgcgc cttggcgcac atggccagcc gtcccgggac agtattctgg
     2821 caaggtcggc agatcatgga ctggtaccag aaggcgacag catgagcttc atgacgaaat
     2881 ggggcctgct gagccagggc gaacgggacg cggcctacaa caatacgtct catgtggtgg
     2941 acagcgcagt gctgaacgcg gccagggagt cggcgtcatc ggcgtttcgt gcggcaaacg
     3001 gaatgcacct ggacctgcgg tacggcgctc gggagcgtaa cacctgggat ctgtttccga
     3061 cgtccgatcc ggatgcgccg tgcatcgttt tcattcatgg cggctactgg cagcgcaaca
     3121 gcaaagagca gttcgccaat ctgatcgccg ggccgcatgc gcgcggctgg gcggcggcgt
     3181 tgccgggata cacgttggcg cccgatgcgt cgttgaccga gatcgtcgcg gagatcaatg
     3241 cggcgctgga ctggctggcg atgcatggcc cggcacacgg catcaacggt ccggtggtgc
     3301 tgtccggctg gtcggccgga gggcatctga cagcgatgtg cctgggccat tctctggtga
     3361 aggcgggact gtcgatttcg gggctgtttg agatggggcc gatacgcgac acctatctga
     3421 atgagaggct gcggctgacg gagcaggaga tcgttgcctt atcgccgatg cggttgccac
     3481 tggtcgataa gccgttggcg ttggcatatg ggacggcgga actgccgccg ttgatgtcgg
     3541 acagccggga tttgcacgca ctgcgttcgg cggcgcatct acccggcgcg ctgattccgg
     3601 tgccgcacgc caatcatttc actatcgtgc atgaattgcg cgatccggat gggatactga
     3661 cacggcacct gccgttgttg cttcgataga tcgacgcggc aacgctgcgt tagcgggtgc
     3721 ggttatattg gtaatcctcg cgctcaccgg ccccgatccg caatccgggg ggcagtggtg
     3781 ttcgggtggc gttcaccttc gcgtggacgt cgagggccgc ctgatcggtc cataattcga
     3841 gcagtgtcaa cttgtccgga tcgagcgcgc tctggaatac ctcgaactgt tcgcatccgg
     3901 gttcttgcct gacctccgcg cagcggtcgc ggaagacccg agcgagttcc gcgcccttgc
     3961 cgggtgcggc gttgattgtc acgacaagtc ggactgccat atctggtttt cccatcgttt
     4021 cgacgcgtgg tgtcgctgcc accctagctc cggcggttgc taatggccac gctcgtgccc
     4081 gcgttcgtgt tccatcggcc gcccaccgcc accgggatga aactccggac gcccgggcgc
     4141 cccgtgaaaa gcgtgcgcgg gaccgccaac gcgaaagacg actcctgccg ctcgccggcc
     4201 ctccaaatgc cggtagacag tatccggcgc gcgaatccaa cgatggccgc catcccaata
     4261 gccccatgcg ccaccgacga ggatgagcgg gaaaaccaca cctgcgacga gaagggtcgg
     4321 agcgccatca ttgaaggcat agccgggata gataccggca taaggatcga ccggatatac
     4381 gggtggcgca taccctggag gtgggtatcc gggaggcggg tatcccgggg gtgggtatcc
     4441 cggcggtggg tatcccgggg gtggataagc gtagccggga ggcggcggct gcgcgctcgc
     4501 cgcaccgagg gatagaacga ccatgccaat gaccaacgcg ccgcgcatgt cgaagtccct
     4561 ccatccaatt catgccgcag gcaatacggt tgccgcatcg aagtcaactg attcccccgc
     4621 ccggcgtttc ggtcatccgg ctacgcccag gatcgcctcc tccacatccc gcaagcggtc
     4681 cttgccgaaa tagatcgcat cgccaacgaa aaaggtgggc gaaccgaacg cgccccgcgc
     4741 gacggacatt tcggtattgg cgatcaaccg aactttcacc gcggggtcct gggtccgcgc
     4801 catcacggac tccgcatcca gccccgaggc ggtcagggcg tcgcgcaaca catccggctc
     4861 atccaacttc ttcggcgcct cccacatgtg gtggaagatc gcgtgtacgt agcgctccag
     4921 acagccgtcg atctcggccg ccgcggcgcc gcgcatgatc tgcaaggtgt tcaccggaaa
     4981 gaaggggttc cgcacgaagc cctcgatccg atggcggcgg atgaagcgtt cggtttcaag
     5041 ccgctcgtag tccggcttgt tgcggatgcc ggcaaaagcc tcggcggggg agcggttgcc
     5101 ggtcgccttg aataccccgc ccagcagcac cggcatgtag cggaagcgtg cgccggtgcg
     5161 ggcttcgatc gcggggatga cgcggtgcga cagataggcg tttgggctgc cgaaatcgaa
     5221 atgaaattcc acttgcatgg tgcttgcctc accggatgtg cgataggggg cggccctgac
     5281 agtgacatat ccggggggat ttggcattga cgtccggtcg cttcctaacc aactatcaac
     5341 atcgtagttt ctgtgcgagt gattgtaaaa tgcaacgcaa aagtttcagc accatgcaat
     5401 gcccgattgc tcgcgggctg gagcatgtcg gcgagtggtg gagcatcctg atcctgcgag
     5461 acgcgtttcg cgggctgacc cggttcgacg agttcagtga aagcctgggg atcgcgccca
     5521 atatgctgac ccggcggttg aacgccttag tggaggccgg gctgttggca cgccagcgct
     5581 ataatgagcg gccaccgcgg gacgaatatg ttctgacgca gcgcggcagg gatttccgtc
     5641 cggtgatgct ggcgatgatg gcattcggca acaagcattt cccgccggac gaccggacgg
     5701 tccagatcgt caatatcgaa aatggccagg cggtggatcc gctgctgctc gatcccacga
     5761 ctggccgcga ggtcgctggt ccggggtatc gggtcgtcac cacaatgctg cgagacgccg
     5821 ccgcgtgatc cgcgagcgca cgttcgcgtg gtccgatccg cgcgtgaccg ctgaggccgg
     5881 ccgtcgcatg gcaggcctgg atctgatgct ggcctggttg aacggctcgg tgccggcacc
     5941 gccgatttcc gcgctggtgg gactatcggt cgccgaggtg gaggcgggac gcatcgtcat
     6001 gcgactgact ccggctgagt accattataa tccgattggc acgatgcatg gcggcattct
     6061 ggcaactttg ctggattcgg tgatgggttg cgcggtgcat tccacgttgc cgaaaggccg
     6121 cgcgtatacg tcgctggaga tcaaggtgaa ttacgtccga gcagtcaccg atgagtccgg
     6181 agaactgacc gccgagggca cgctcgttca tggcgggcgc aggtcggcag tcgccgaggg
     6241 gaaggtcctt gatgccaagg ggcggctgtg cgcgaccgcc agcacgacat gcctggtgtt
     6301 cgacctgccg gccgcctgat gaccctgaaa gcggcggtcg tcggcgcggg accggcaggc
     6361 ttgatggcgg cggaagtgct tgctcggggc ggtttgacag tgaccgtcta tgatcagatg
     6421 ccttcggtcg ggcgcaagct gctaatggct gggcgtggcg gtttgaacct gacccatgcc
     6481 gagccgttgc cggtttttct gtcgcggtac ggcgcggcgc gtgcctggct cgaaccgatc
     6541 atagccgcct tcccgccgga cgtgttgatt gcgtggtgta gcaatcttgg acaaccgacg
     6601 tttgtcgggt ccagcggtcg ggtctttccg accgcgatga aggcttcccc gctgttgcgg
     6661 gcctggctgc gccggctcgc ggagctggat gtcgcgtttc gtgtcaggca tcgctgggcc
     6721 ggttgggatg cggccggaaa cctgcgcttc gacaccgcga atgggatggt ggaccaccgt
     6781 tcggatgtag cggtgctggc tttgggcggc gcgtcctggc cgcgtctcgg gtccgacgca
     6841 ggctgggccg cgcatttgcc tgacctgttg acgccgtttc agccggccaa ctgcgggttc
     6901 ctggtcgact ggtcagtgca ctttcgcacg cggtttgccg gccggccgtt gaagcggctg
     6961 gctgtccgcc tcgggccgga taccgtccgc ggcgaggcca tgatcacgga agccggcatt
     7021 gaaggcggcg tcatctatgc gctgtccgct cggttgcgcg atgcgatcgg tgtcgagggt
     7081 ttcgcgacga tcaatctgga tttgcgtccg gatatcagtg aggcagtgct gcaggatcgg
     7141 cttggcggcc cccggcgtgg ccagtcgttg gcgaacacgc tgcgcaagca ggctggtctg
     7201 tcgccggaag cgatcgggct ggttcaggag gcactgcacc atggcgcgct tccggacaac
     7261 ctgccgcgat tgatcaaatc actgcctgtc cgtttgaccg ctccggcatc tatcgatcgg
     7321 gcaatttcct ccgccggtgg tctgcgggcg gaatccttgg acgcatcgct gatgctgcgc
     7381 catcgcccgg gcgtcttcgc cgccggggag atgctggatt gggaggcgcc caccggcggt
     7441 tatctgctgc aggcctgcat cagcaccggc gtcgcggccg ccaacggcgc gcttgcgtgg
     7501 gtggcgcatc gcggagggtg attggtttgc cggcgcggca gggctagtgc ccgccgcgct
     7561 cgctgttcgt tatgaagcct caaagcggaa ctttgtgcga cccgtcatgg caggtttttg
     7621 tgcgacccgt cgcaacgcgg tgacttgctg ctgcccttgc agccgcagaa cgacacgatg
     7681 ccggattcct cggcgtcgaa cttcatgggg gcaaatgtgg accccttgtg tgacccatcg
     7741 cagaacggct gtttgccact tttgccgcag gcgcaccacc agtaagactt tccagcctcg
     7801 acctcgattt tgtaggagcc cttttgggca acgatcggca gtgactcaga catgatattt
     7861 cctccctatg cggattgaac gccgtaaatc gagcgcgcct tcgccggggt aacgtaaccg
     7921 tccagcaggt cttcgcaaag agccgccttg tcgcgttcgg acggcggacc atagccgcca
     7981 gatcccggcg cttccatcac caccagagat ccggccggcg ccaggaagcc tcccttgctg
     8041 gtcaatttcc gagcgttagt gtgcggctca atcaattgca gcacagcggg ggcgccagcc
     8101 aggccgccgg acaggccaaa gggcggggtt actgtccgtt cacagcagac cgctgcgtgg
     8161 gcctgattcg ccagcacgcg ccagacacgg cgcacgccca agccgccgcg ataggtgcct
     8221 gcgccgccgc tgtcgggcac cagcgaatac tcctctacgc gcaagggaaa gctcatttcc
     8281 aggatttcga tcggcgtgtt gctcatgttg gaaacggtac tggccacggc gttgatgccg
     8341 tccttgttcg gccgcgcgcc gaagccgcct ttgaccgatt cgtaactgac gaaacgatcg
     8401 ccattccgat aatcgacgcc gccgaaggtg atgacggccg aggttccttg cgatccggcc
     8461 atgacggttc gcggagtgat ggcgaacagg gcggccatga ccatgtcggc gacgcggtgg
     8521 gaaatttcgt ggttggcata gacaacgggc gacgggtgcc gcgcgttcac caccgatccc
     8581 gccggcgccg taacagtcac cggccgccag cagccagagt tgggcgggat caggctcttt
     8641 ggatcgacga tcatcttcag tgcgcagtac acacctgatg ccgtcactgt cagcggtgcg
     8701 ttcatcggcc ccgccactgc cgggtcggaa cctgcgaaat ccacagcgac ggtgtcaccc
     8761 cgcttggtca ccttgatgca aaccttgaaa gtctggtctt cggtttcgtt cggcgcgatt
     8821 acaccgtcgc cgtcgaagat gtcggcaaat tccgcctcac catccggcag ggcgcggagc
     8881 gcc
//
LOCUS       DATAVD010001884         2119 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3717296, whole genome shotgun sequence.
ACCESSION   DATAVD010001884 DATAVD010000000
VERSION     DATAVD010001884.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3717296"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..520
                     /locus_tag="VHX39_35905"
     CDS             <1..520
                     /locus_tag="VHX39_35905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DnaJ C-terminal domain-containing protein"
                     /protein_id="HEX3996585.1"
                     /translation="GTVQRERSLQVAIPAGVEDGTRNRLTGEGEAGGQGTQNGDLYVH
                     IAVKPHQFFQREQANILMRVPLRMTQAALGGDIEVPVIDGTKAKVKIPPGTQTGDNFR
                     LRGKGFSVLRSNQRGDMFIQVAVETPQHLSARQRELLEEFEAEAGQNTKHSPDHEGFF
                     AKVRDFFEGGRA"
     gene            complement(571..822)
                     /locus_tag="VHX39_35910"
     CDS             complement(571..822)
                     /locus_tag="VHX39_35910"
                     /inference="COORDINATES: protein motif:HMM:NF012669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996586.1"
                     /translation="MGVTGVHAELGLTTGDAEEAAIKRALSRQAGETVVLASRVKLGA
                     ASPFVVLPLSEIDALVIEDGLPEELIEPYRALGVVLVQR"
     gene            complement(841..1904)
                     /locus_tag="VHX39_35915"
     CDS             complement(join(841..1418,1418..1904))
                     /locus_tag="VHX39_35915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611116.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEX3996587.1"
                     /translation="MVALSITRTDLTSAELRAEAARSKNARASRRMLAIAMALDGHSR
                     EAAAEACAMDRQTLRDWVVRYNEYGLPGLYDIAQPGPRPFLTAEQEAEVVTWVENGPD
                     LAKDGVVRWRRVDLRDRIKDRFGVVFHERSIGKLLRRLNFRRISVRPRHPETDEEEQE
                     TFKKNFVALVRAAIPATLADKAVEFWYQDEARVGQQGTLTRVWATRGSRPRALRDHRF
                     DWAYLFGAACPARGVGAAIVMPEVNISAMNEHLAVISRNVAAGAIAVLILDGAGWHRS
                     PRLKVPENVVLLPLPPYAPELNPIENVWAYLRSNYLSHRTYKDYEAIVNACCEAWNAL
                     MRMPDVIRSITNRAYAQVKI"
BASE COUNT          429 a          670 c          651 g          369 t
ORIGIN      
        1 cggcacggtc cagcgggagc ggtcgctaca ggtcgcgatc ccggccgggg tggaagacgg
       61 cacgcgcaac cgcctgaccg gcgaaggtga ggccggcggc cagggcaccc agaacggcga
      121 cctctacgtg catatcgccg tcaagccgca ccagttcttc cagcgcgagc aggccaatat
      181 cctgatgcgc gtgccgttgc ggatgactca ggcagcgctt ggcggggaca tcgaggttcc
      241 ggtcatcgac ggcaccaagg ccaaagtgaa aattccgccc ggcacccaga ccggcgataa
      301 tttccggttg cgcggcaagg ggttctcggt gctgcgcagc aaccagcgtg gcgacatgtt
      361 cattcaggtc gccgtggaaa cgccgcaaca cctcagcgcc cggcaacgcg agctgctgga
      421 ggagttcgag gcggaagccg gccagaacac caagcacagc cccgaccatg aggggttctt
      481 cgccaaggtg cgggacttct ttgagggcgg gcgggcctga accccgcgcg tgcgcccggc
      541 agcgacggaa caatttgagt tgtccgtcac tcatcgttgg acaagcacga cccccagggc
      601 ccgatagggc tcgataagct cctccggaag accgtcctcg atgaccagag cgtcgatctc
      661 ggacagcggc agaacgacga agggcgaagc ggcgccgagc ttcacacgcg atgcgagcac
      721 gacggtctcg cctgcctgcc ggctcagcgc acgcttgatg gcagcctcct ctgcgtcgcc
      781 cgtggtcagc cccaattcgg cgtgcacacc cgtgacgccc atgaagtaat accagcggcc
      841 ctagattttg acctgtgcgt aggcgcggtt ggtaattgac cggatcacgt ccggcattcg
      901 catcagggcg ttccacgcct cgcaacaagc gttgacgata gcttcataat ctttgtaggt
      961 gcggtgactg agataattgc tccggaggta agcccaaaca ttctcgatcg ggttaagttc
     1021 gggcgcgtag ggtggcagcg gcaagagcac aacgttttcc ggcactttga ggcggggcga
     1081 acggtgccag ccagcaccat cgaggatcaa tacggcgatc gcgccagccg cgacgttgcg
     1141 actgatcacg gcgagatgct cgttcattgc gctgatattc acctccggca tgacgatcgc
     1201 ggccccgacg ccacgcgccg ggcaggccgc gccgaagaga taagcccagt cgaaacgatg
     1261 atccctgagc gcgcggggcc gggagccgcg tgtggcccaa acccgggtca gagtgccttg
     1321 ctggccgacc cgtgcttcat cctggtacca gaactcgact gctttgtccg ccagggtggc
     1381 cgggatcgcc gctcgcacga gagcaacaaa gtttttttaa aagtctcctg ctcttcttca
     1441 tccgtctcag gatggcgtgg acgaactgat atgcgtcgaa aattcagccg acgcagaagt
     1501 ttcccgatgc tgcgctcgtg gaagacgaca ccgaaacgat ccttgatccg gtcccgtaga
     1561 tcaacgcggc gccagcgcac cacgccgtct ttcgccagat cgggaccgtt ttcaacccag
     1621 gtgacaactt cggcttcctg ctccgcggtc aggaagggcc ggggccccgg ttgggcgatg
     1681 tcatacagac ccggcagacc gtactcattg tatcgaacca cccaatcacg aagcgtctga
     1741 cggtccatgg cgcaggcttc agcagcggcc tcacgggaat gaccgtcaag cgccatcgcg
     1801 atcgcaagca tgcgccgcga tgccctggca ttcttcgatc gtgcggcttc cgcccgcagt
     1861 tccgcggacg tcaggtccgt ccgagtgatc gataatgcaa ccatcccgca ctccatgagc
     1921 agactgttaa agcatcgact catgaccgga tggattcggg aaagccccta cgagtcacac
     1981 ccgagggccg ctggtataag tgaggtcatc gccgccagag agtccatgta gtcgcgccac
     2041 ccgacgatct tccgatcttc gatagtgaca accgatatga aacggttctc gtagagcttg
     2101 ccggaacgga ccgcgtttc
//
LOCUS       DATAVD010001885         7837 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3529114, whole genome shotgun sequence.
ACCESSION   DATAVD010001885 DATAVD010000000
VERSION     DATAVD010001885.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 7837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7837
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3529114"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..584
                     /locus_tag="VHX39_35920"
     CDS             <1..584
                     /locus_tag="VHX39_35920"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEX3996588.1"
                     /translation="LKSKTEGKLHPAELFRALKPYVENDPNTILICDGGEFAQWGQAI
                     LRNDRRMINGVAGAIGSSLPIAGASRIVERNAPVFAVLGDGTFGFHMAEFETAVRLDL
                     PFVAVVGTDCRWNAEYNLQVRDYGLNRTYGCELDPTRYDLVVAAVGGHGELVTQVADL
                     PAAVERALASGKPACINVMIESIPSPVVRISAP"
     gene            complement(571..1341)
                     /locus_tag="VHX39_35925"
     CDS             complement(571..1341)
                     /locus_tag="VHX39_35925"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEX3996589.1"
                     /translation="MPVDLIIEGAVAKVVLNRPERLNALTWEMRQQLREHFSELRFND
                     AVRAIIVTGEGRAFCTGADVGGMERKDLHGEREKLQQGSHSYMRVLTAIEKPVIAAVR
                     GPTVGIGWSIAMGCDLIVASETARFSQIFRRIGLAPDGGAIWFLSKRIGMARAKELVF
                     TGRFVDAAEALSLGLVNSVVADGELMAKAEELAADLAAGPTFAFGMAKKMFAMANSTY
                     EDFLDLESLVQPQLGQTEDHREGVAAFKEKRAPKFKGH"
     gene            1429..2616
                     /locus_tag="VHX39_35930"
     CDS             1429..2616
                     /locus_tag="VHX39_35930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008495298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX3996590.1"
                     /translation="MQRPFEGIRIIDITHVLAGPFAAYQLGLMGADVIKVEHPDDPDQ
                     SRDSGSDSDLNHANMGTGFLTQGSNKRAITLNLKTEQGREILKKLVATADVLVENYRP
                     GAFEALGLGYEDLRKINPRLIYASFSAFGQGGPRREQTAYDHVIQSTSGIMAMTGTPN
                     ANPIKIGAPAIDYATGTMGAYALSAALFQREKTGQGQRVDMAMLDVAMILMASHLTGY
                     MRNGKHPKPSGNATGHATSQAYETKDGLVMVGASNLRQQRRLWTVLERPDMIKRTNDE
                     RDADHAREVQVLTNIMLTRTAAEWEVWLQERHVPACRVRTMGEALADPQIASRGILHK
                     HENAPGVPGSFTVPVAAFKFADGGPKVDRPPPMFGQHNEEVLTELGYSKTDIAGFRSG
                     KII"
     gene            2629..3588
                     /locus_tag="VHX39_35935"
     CDS             2629..3588
                     /locus_tag="VHX39_35935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HEX3996591.1"
                     /translation="MSDLPQHVEIHEEGPREGFQIEPGPIATADKIRLIDALSETGLH
                     HIQACSFVNPRLVPGWADAEAVAAGFTAKPGVHYTGLYFNGNGLDRALAFKDKLTISG
                     SISLTASEGFTKKNLNRTPEENLTQMKRHAEAHLSRGIPVSRVGVMAAFGCNYQGDIP
                     PAQVVKTLDDGMQIARETGAQIELFSLADTMGWATPARIERVINAVRERWPDMKISLH
                     LHDTRGLAVANAHAGLKLGVTRFDSTVGGLGGCPFAGQPKAAGNICTEELVLLCEEMG
                     IDTGVDLDKLIEVGRMAEDIVGHQLPGELIHAGSLDAFRRMAA"
     gene            3588..4790
                     /locus_tag="VHX39_35940"
     CDS             3588..4790
                     /locus_tag="VHX39_35940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX3996592.1"
                     /translation="MSARPLTGLKVLEFTHTVMGPTAGLLFAEMGADVVKVEPAPNGD
                     HTRRLGGFGAGFFAAFNRNKRSLAIDLKQPEGQAAMYRLVAHTDLVLENYGPGTMERL
                     KCGYEHFAPFNDRLIYLALKGYLAGPYEHRPALDEVVQFQTGLAWMTGPPGRPLRAGA
                     SVIDIMGAAFGVIAAQAALRERDVTGKGQRVSSALFESAAFLMSTHMAGMAATGLEAR
                     PMPARRGAWAIYDVFNTGGDGQLFIGVTSDQQWTRFVEEFGLQELAADPRMATNVTRL
                     AERAWLIPALQDVLIKYPQSEIETRCERANVSWAPVGQPKDMFDDPHLLATGGLLDVY
                     VSRFGGGDGKIVGLPALPVEFGDHQRPGITRQPPKVGEHNAEVLAEAGFTQQEIANLA
                     AGGITVAA"
     gene            4808..5671
                     /locus_tag="VHX39_35945"
     CDS             4808..5671
                     /locus_tag="VHX39_35945"
                     /inference="COORDINATES: protein motif:HMM:TIGR03620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03620 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEX3996593.1"
                     /translation="MQLGRLGAWYSTDKLGSPAQIRQFVQTVEKLGYDTLWYPESRGY
                     ESFAVAGFMLSCTSKLKIGSSIASIYARDAFTSRRGMITLNDLYGDRFILGLGVSHPP
                     MVEGLRGHTYEKPIPAMRRYLNGICKGEPGADNFPLAVAALGPLMLKLSGEMTRGALP
                     YNTNPRHTAEAAKLLGPNKWCAIEQKVTLETDPAKARALGRKELSRYMALDNYRNNFL
                     RIGFTEADLHDGGSDAFIDQMVLWGGAAKVKEGLRAHFAAGATHVAIQPVHDDGDIAA
                     RDHILTMLADT"
     gene            5668..6477
                     /locus_tag="VHX39_35950"
     CDS             5668..6477
                     /locus_tag="VHX39_35950"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3996594.1"
                     /translation="MIDPTKDTVLITGAAGAIGTAVRHGLRSGWPQLRLTDVRPIKDP
                     ANNEEVFVADVAERPALDRMMQGVKAVVYLTGAGPDYSLEDLFRINVRGVFDVFESAR
                     LAGVERIVYASSNHAFGCYPITERVTPDMPPRPDSLYGAFKVYGETILQNYFDRHGIR
                     SVSMRIGTYRTLPIDQRSLATWLSPADVARLVDASLRHDDPGCLIVNGYSANTRIKVA
                     DTNWDFLGYHPQDNAEDHIGMLRAKGIDVDGPWEWQEHGGSHANVPERRPR"
     gene            complement(6474..>7837)
                     /locus_tag="VHX39_35955"
     CDS             complement(6474..>7837)
                     /locus_tag="VHX39_35955"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422733.1"
                     /note="acts in conjunction with GvcH to form
                     H-protein-S-aminomethyldihydrolipoyllysine from glycine;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycine dehydrogenase
                     (aminomethyl-transferring)"
                     /protein_id="HEX3996595.1"
                     /translation="MIPLGSCTMKLNATAEMIPITLPGFADIHPFAPEDQSQGFRVLI
                     QRVTDWLGELTGFAAVSLQPNAGSQGEYAGLLAIRRWHASRGEAHRDICLIPSSAHGT
                     NPASAAMAGLRVVVVGCDHAGNVDLGDLHAKVEQNRDRLAALMITYPSTHGVFEAAIR
                     DICAAVHEAGGQVYMDGANMNAQVGLTSPALVGADVCHLNLHKTFCIPHGGGGPGVGP
                     IGVAAHLASFLPGDPMVVDAGAVSAAPFGSALILPISYAYIRMMGAAGLKRATEVAIL
                     NANYIAARLNDSFPVLYRGGNGMVAHECIIDCRGFQAGTGVMVEDIAKRLQDFGYHAP
                     TMSWPVAGTLMIEPTECESKAELDRFCDAMIAIRGEIDAIAAGRMDKADNPLKNAPHT
                     AREVSGNVWTHAYSREQAAFPLPFVAAAKYWPPVKRVDNVYGDRNLVCTCAPLEAYAE
                     AAD"
BASE COUNT         1609 a         2460 c         2352 g         1416 t
ORIGIN      
        1 atctgaagtc gaagaccgaa ggcaagctgc atccggccga attgtttcgg gcactgaagc
       61 cgtacgtgga aaatgacccg aacaccatcc tgatctgcga cggcggcgaa tttgcacaat
      121 ggggtcaggc gattttgcgc aacgaccgca ggatgatcaa cggcgtcgcc ggcgccatcg
      181 ggtcatcgct gccaatcgcc ggtgcgtctc gcattgtcga gcgcaacgct cccgttttcg
      241 cggtcctagg cgatggcacc ttcggctttc acatggcgga gttcgaaacc gccgtacggt
      301 tggacctgcc gttcgtcgct gtcgtgggca ccgattgccg ctggaacgcc gagtataacc
      361 tgcaggtcag ggattacgga ctgaaccgca cctatggttg cgaactcgat cccacccgtt
      421 acgaccttgt ggttgccgcg gtcggtgggc acggcgaact ggttacgcag gtcgccgatc
      481 tgccagccgc ggtcgagcga gcgttggcca gcggcaagcc cgcctgcatc aacgtgatga
      541 tcgagagtat cccctcgcct gtcgtccgga tcagtgcccc ttgaattttg gtgcgcgctt
      601 ttccttgaag gccgcaacac cttcgcgatg gtcctcagtc tgaccgagtt gcggctgcac
      661 caggctctca aggtcgagaa agtcttcata tgtgctgttg gccatggcga acattttctt
      721 cgccatgcca aaggcgaagg ttggaccagc ggcaagatcg gctgccagct cctcggcttt
      781 cgccatcagc tcgccatccg ccacgactga gttgaccagg ccaagcgaca atgcctcggc
      841 cgcatcgaca aaccggccgg tgaacaccaa ctccttggcg cgtgccatgc caattcgttt
      901 cgacagaaac caaatcgccc cgccatccgg cgccagtccg atccggcgga agatttgcga
      961 aaaccgcgcg gtctccgagg cgacgatcag gtcgcagccc attgcaatgc tccagccgat
     1021 gccgacggtc ggaccgcgca ccgccgcaat gaccggtttc tcgattgcag tcagcacgcg
     1081 catatacgaa tggctgcctt gctgaagttt ctcccgctcg ccgtgcaggt ctttgcgctc
     1141 catgccgccg acgtcggcac cggtgcagaa cgctcggccc tcgccggtga cgatgatggc
     1201 gcggacagca tcgttgaacc gcagttcgga aaaatgttcg cgcaattgct ggcgcatttc
     1261 ccaggtcagc gcattcagcc gctccgggcg gttcagcacc accttcgcca cggcaccttc
     1321 gataatcaga tcaaccggca tgtcggccct ccctctggca tcctggcgtg ttgaccggac
     1381 cggggcaagg ttgcaccttc ggccccgaaa acgcccggag gagccgccat gcaacgccca
     1441 tttgaaggca ttcggattat cgacatcacc catgtgctgg cgggcccgtt cgctgcctat
     1501 cagctcggac tgatgggcgc tgatgtcatc aaggtggaac atccagacga tcccgatcag
     1561 agtcgcgact ccggcagcga cagcgatctc aatcacgcca atatgggtac ggggtttctg
     1621 actcagggat ccaacaaacg tgcgatcacc ttgaatttga agaccgaaca gggacgcgaa
     1681 atcctcaaga agctggtcgc cactgccgat gtgctggtcg agaactaccg tcccggcgcg
     1741 ttcgaagcgc ttggcctggg ttacgaggat ctgcggaaaa ttaatcctcg gctgatctac
     1801 gcatcgtttt ctgcgttcgg tcagggcggc cctcggcgcg agcaaaccgc gtacgatcac
     1861 gttatccagt cgacgtcagg tatcatggcg atgaccggca cgccgaacgc caacccaatc
     1921 aagatcggtg cgccggcaat cgattacgcc accgggacga tgggggctta tgctctgtcg
     1981 gccgcattgt tccagcggga aaagaccggc cagggacagc gggtcgacat ggcgatgctg
     2041 gatgtcgcga tgatcctgat ggcgagccat ctgaccggct acatgcgcaa cggcaagcac
     2101 ccgaaaccgt cgggcaatgc gaccggccac gcgactagtc aggcttatga aacgaaagac
     2161 ggcctggtca tggtcggcgc ctccaacctc cgtcagcagc gccggctgtg gaccgtgctg
     2221 gaacggcccg acatgattaa acgcaccaac gacgaacgcg acgccgatca cgcgcgtgag
     2281 gttcaggtgc tgaccaacat catgctgacc cgcaccgctg ccgaatggga agtatggttg
     2341 caggaacgcc atgttcccgc ctgccgagtg cgcaccatgg gcgaggcgct ggccgatccg
     2401 cagatcgcca gccgtggcat actgcataag cacgaaaacg ccccgggtgt gcccggttcc
     2461 ttcaccgtcc cggttgccgc gttcaaattc gcagacgggg gcccgaaggt cgatcgccca
     2521 ccgccgatgt tcggccagca taatgaagag gtgttgacgg aacttggcta cagcaaaacc
     2581 gatatcgccg gattccgatc cgggaaaata atctgaaagg acccaaccat gagcgacctg
     2641 ccgcaacacg ttgaaatcca cgaggaaggc ccgcgcgagg gttttcagat cgaacccggc
     2701 ccgattgcca cagcggacaa gatccgtctg atcgatgcgc tgtcggaaac cggcctgcat
     2761 cacatccagg cttgttcatt cgtgaacccc agactggttc ccgggtgggc cgatgcggag
     2821 gccgttgcag caggcttcac cgcgaaacct ggcgtgcact acaccggact ttattttaac
     2881 ggcaacgggt tggaccgcgc gctggcgttt aaggataaac tgaccatcag cggctcgatt
     2941 tcgctgacgg cctccgaggg gttcaccaag aagaacctca accggacgcc ggaggaaaat
     3001 ctgacgcaga tgaaacgtca cgcggaagcg cacttgtcgc gcggtattcc ggtcagccgg
     3061 gtcggtgtga tggcggcgtt tggttgcaat tatcaaggcg acatcccgcc ggcgcaggtg
     3121 gtgaaaacgc tggacgacgg catgcagatc gccagggaaa ccggtgccca aattgaactc
     3181 ttttcacttg cggacaccat gggttgggcc actccggcgc ggatcgagcg cgtcatcaac
     3241 gcggtgcgcg agcgttggcc ggatatgaaa atctctctgc atctgcacga cacacgcggc
     3301 ctcgccgtcg ccaacgcgca tgccgggtta aaacttggcg tcacccgatt tgattccacc
     3361 gtcggcggtc tggggggctg cccgtttgcc ggacaaccca aggcggccgg caacatctgc
     3421 accgaagaac tcgtgctgct gtgcgaggaa atgggcatcg acaccggcgt cgatctcgac
     3481 aaactgatcg aagtgggccg catggcggaa gacatcgttg gccatcagtt gcctggcgag
     3541 ctgatccacg ccggcagcct ggacgcattc cggcggatgg cggcctgatg tcggctcggc
     3601 ccctgacggg actgaaggtt ctcgagttca cccacaccgt catggggccg accgccggtc
     3661 tgctgtttgc cgaaatgggc gccgacgtcg tcaaagtgga gcctgccccg aatggcgatc
     3721 acactcgccg tctgggcggc ttcggtgccg ggttttttgc cgcgttcaac cgcaacaaac
     3781 gcagcctggc gatcgatctg aagcaaccgg aaggccaggc ggcgatgtac cgtctggtgg
     3841 cgcataccga cctcgtgctg gagaattacg gtcccggcac gatggaacgg ctgaagtgcg
     3901 gctatgaaca ttttgcaccg ttcaacgacc ggctgattta tctggcgttg aagggctacc
     3961 ttgccggacc ctacgaacac cggccagctt tggacgaagt cgtgcaattc cagaccggcc
     4021 ttgcctggat gaccggcccg ccaggccggc cattgcgcgc cggagcctcg gtgatcgaca
     4081 tcatgggcgc cgcattcggc gtcatcgcgg cccaggctgc gttacgtgag cgagacgtta
     4141 cgggcaaggg ccaacgcgtc agcagcgctc tgttcgaaag tgccgcgttt ctgatgagca
     4201 cgcacatggc cggcatggcc gccaccggcc tcgaggcccg cccaatgcct gcccgccgcg
     4261 gcgcctgggc catctacgac gtgttcaaca ccggcggtga cgggcaattg ttcatcggtg
     4321 tcaccagcga ccagcaatgg acccgcttcg ttgaggaatt cggcctgcag gagctcgccg
     4381 ccgatccgag gatggcaacc aatgtcaccc gactggcgga acgcgcatgg ctaatccctg
     4441 ccctgcaaga cgtcctgatc aagtacccgc aatccgaaat cgagacccgc tgcgagcgag
     4501 ccaacgtttc ctgggctccg gtcggacagc caaaggatat gttcgacgac ccgcacctgc
     4561 tggcgaccgg cggcttactt gacgtctacg tctcgcgctt cggcggcggc gacggtaaga
     4621 tagttggctt acccgcctta ccggtggaat tcggcgatca ccagcggccc ggcattacaa
     4681 ggcaaccgcc aaaagtcggc gaacacaacg ccgaagtgtt ggccgaggcc ggctttaccc
     4741 aacaggaaat cgcgaatctg gcggcaggcg ggatcactgt cgctgcctga acaaaggaga
     4801 cgggacgatg caactcggcc ggcttggcgc atggtattcc acagacaaac tcggcagtcc
     4861 ggcacaaatc aggcaattcg tgcagaccgt ggagaagctc ggttacgata cgctctggta
     4921 tccggaatct cgcggctatg aatcgttcgc ggtcgccggg tttatgctgt cctgcacgtc
     4981 gaaactgaaa atcggcagct cgattgccag catttatgca cgcgacgctt ttacctcccg
     5041 gcgtggcatg atcacgctga acgacctgta tggcgaccgc ttcatccttg gccttggtgt
     5101 cagccatccg ccgatggtgg aaggtctacg aggccacacc tatgaaaagc cgatccccgc
     5161 gatgcggcga tatctgaacg ggatctgcaa aggtgagccg ggcgctgaca atttcccgct
     5221 tgcagtggcc gcgctcggcc cgctgatgct gaaattatcc ggcgaaatga cacgaggggc
     5281 gctgccgtac aacaccaacc cgcgccacac cgcagaggca gcgaagctac tcggcccgaa
     5341 caagtggtgc gcaatcgaac agaaagtgac gctggagacg gatccggcaa aagcccgggc
     5401 cctgggccgc aaggaactgt cgcggtatat ggctttggac aattaccgca acaatttcct
     5461 gcgcatcggc tttaccgagg cggatctgca cgatggcggc tccgacgcgt tcatcgacca
     5521 gatggtgcta tggggcggcg cggccaaagt gaaagaaggc ctgcgcgctc atttcgctgc
     5581 cggcgcgacg cacgtggcca tccagccagt acacgatgac ggcgatattg cggcacgcga
     5641 tcacatcctg acaatgttgg cggacacatg atcgacccca caaaagacac cgtcctgatt
     5701 accggcgcag cgggtgccat cggcacggcg gtgcgtcatg gattgcgctc tggctggcca
     5761 cagttgcggc tgaccgatgt ccgcccgatc aaagaccccg caaacaacga ggaagtgttc
     5821 gtcgccgacg ttgccgagcg gcccgcgctc gaccgcatga tgcaaggcgt aaaagcggtc
     5881 gtgtatctga ccggcgccgg cccggactac tcgctggaag acttgttccg gatcaatgtc
     5941 cgcggcgtgt tcgacgtctt cgaaagtgcg cgcctcgccg gtgtggagcg gatcgtctat
     6001 gccagcagca atcacgcatt cggctgttac ccgatcaccg aacgagtgac ccccgacatg
     6061 ccgccgcggc cggacagcct gtatggagcg ttcaaagtat atggcgaaac gatcctgcag
     6121 aactatttcg atcgccacgg gatccggtcg gtttcgatgc ggatcggcac ctatcgcacg
     6181 ctgccgatcg atcaacgctc gctggcgacg tggctcagtc cggcagacgt ggcgcgtttg
     6241 gtcgatgctt cgctgcgcca cgacgatccc ggttgcctga tcgtgaacgg ctattcagcc
     6301 aacacgcgga tcaaggttgc cgataccaac tgggatttcc tcggttacca tccacaggac
     6361 aatgccgagg accacatcgg gatgttgcgc gccaaaggca tcgacgtgga tggcccgtgg
     6421 gaatggcagg aacacggcgg ctcgcacgcc aacgtgccgg agcgacgccc gcgttagtca
     6481 gccgcctcgg cgtaagcctc caacggcgcg caggtgcaaa ccagattgcg atcgccatac
     6541 acgttgtcga cccgcttgac cggcggccag tatttcgccg ccgcgacaaa cggcaacgga
     6601 aacgccgcct gctcgcggga gtaagcgtgg gtccagacgt tcccggacac ctcgcgggcc
     6661 gtgtggggcg cgttctttaa cgggttgtcg gctttgtcca tccgtccggc ggcgatggca
     6721 tcgatctcgc cgcggatcgc aatcatcgca tcgcaaaacc ggtccagctc agccttcgat
     6781 tcgcattcgg tcggttcgat catcagcgtg ccggcaaccg gccaggacat ggtcggcgcg
     6841 tggtagccga aatcctgcag ccgctttgca atatcctcga ccatgacgcc ggtgccggcc
     6901 tgaaagccac ggcaatcgat gatgcattca tgggctacca taccgttgcc gccgcgatac
     6961 aacaccggaa acgaatcatt caatcgagcg gcgatataat tggcattcag gatggccact
     7021 tcggtggcgc gcttcaaacc ggccgcgccc atcatccgaa tataggcata cgaaatcggc
     7081 agaatcagcg cgctgccaaa tggcgcggcg gaaacggcgc cggcgtccac caccattgga
     7141 tcacctggca gaaacgatgc caaatgtgca gcaacgccga tcggccccac acccggccca
     7201 ccgccgccgt gcggaataca aaatgtcttg tgcaaattca gatggcacac atccgccccc
     7261 accaacgccg gtgacgtcag ccccacctgg gcgttcatat ttgcgccatc catgtagacc
     7321 tgaccgcccg cctcatgcac cgcggcgcaa atatcgcgga tcgccgcttc gaaaacccca
     7381 tgagtcgaag gataggtgat catcagtgcg gcaagacggt cgcggttttg ctccaccttc
     7441 gcatgcagat cgccgaggtc cacgttaccg gcgtgatcgc agccaacgac cacaacgcgc
     7501 aatccggcca tggcagcact ggccggattg gtgccgtgcg ccgaggacgg gatcaggcaa
     7561 atatcgcgat gcgcctcgcc acgcgaggca tgccagcgcc ggatcgccag cagtccggcg
     7621 tattcgccct gcgatccggc attgggttgc aacgatacgg cagcgaaacc ggttaattcc
     7681 ccaagccaat ccgtcacgcg ctggatcagc acgcggaaac cctgcgactg atcctccggt
     7741 gcaaacgggt ggatatcagc gaaaccaggc agcgtaatcg ggatcatttc ggccgtcgca
     7801 ttcaatttca tcgtgcacga ccccagtggg atcatcg
//
LOCUS       DATAVD010001886         3206 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2412015, whole genome shotgun sequence.
ACCESSION   DATAVD010001886 DATAVD010000000
VERSION     DATAVD010001886.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3206
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2412015"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1491)
                     /locus_tag="VHX39_35960"
     CDS             complement(<1..1491)
                     /locus_tag="VHX39_35960"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HEX3996596.1"
                     /translation="MNDLLQQFLIECRELVEAATVDLLALETSPQDQDRIDGAFRGFH
                     TLKGAAGIVGFLVMGQVLHAAESLLDSIRNGNRPVSAELIGDCLACLDQVVRWLEETE
                     AKGDIPMLPDTAADALVARLTSPAATLPAVPARNPSLGAPDWLAPLLARHAARRAEVQ
                     TALRYTPDPDCFFRAEDPLGLVADLPGILALELAPVEPWPALEEFSPFGCNLVITALL
                     AAPPDAASLVLLPVSDQVTIFPVTEVRFAGSVLSPDARAVLQEQLRLAANDETTGFAG
                     RLGSAARVAMNVLNRAGLEDARRTLSDAIGQSQRDRSGVAFIAALGALLDQTAQQPGE
                     GPASDAPPATMPEAVVSSDTAEDPVPRTQIVRSLRVDADRIDALVNLTGELTVVKNAI
                     GHTARLARDGADSDDFARRLKDQHAQLDRLVAELQRSVLGIRVLPLHHVFQHFPRLVR
                     EMAQDLGKSVRLVVEGQLTEADKATVEALFEPLLHVMRNALDHGVEP"
     gene            complement(1488..1883)
                     /locus_tag="VHX39_35965"
     CDS             complement(1488..1883)
                     /locus_tag="VHX39_35965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3996597.1"
                     /translation="MSGGSLQPARIMIVDDASLVRMYYRDTLREAGYEVDEALNGLEA
                     LEKLLTTPTDLIVLDVNMPKMDGMTFLRTLRRQALPLAATAVLVTSTEAAPRDAELAR
                     EAGANFYLVKPVARATLLAHVALLCGASE"
     gene            complement(1880..2737)
                     /locus_tag="VHX39_35970"
     CDS             complement(1880..2737)
                     /locus_tag="VHX39_35970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HEX3996598.1"
                     /translation="MNDVRPLNTEDFSRLSEFVYRRTGMVFSEAKRYYVERRVHERMK
                     ATGSQTFASYFARLRIDALSEVEQLINAFTVNETYFYRENHQLQCLTNDLLDDLLDDR
                     VAQAAASKAIRIWSLPCSTGEEPYSIAIWLLQNWPRVDEFDIEIIGSDIDTSVLDAAR
                     LGLFGKRALMQLPVDLIKKYFISLGDERWQIDDSIRGSVHFAPANLVNAAETAAFGRF
                     DVIFCRNVLIYFDDASRRIAAENLYESLLPGGFLCLGHTESMSRISPLFEVRRFSDAI
                     VYQRPGADR"
     gene            complement(2730..>3206)
                     /locus_tag="VHX39_35975"
     CDS             complement(2730..>3206)
                     /locus_tag="VHX39_35975"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEX3996599.1"
                     /translation="AEALKTEADLRVREAIFTSLVRIGSPQCVDAVIPCLREDDAAFR
                     TGALDALRAMIGAVRPVLPTLLADPDADIRLLACDLARELPAADATGLLCDVLSHETE
                     ANVCAAAVDVLADVGGPEALPVLQATAARFGDVTFLTFAVKIGMERILAGRPVRHE"
BASE COUNT          653 a         1022 c          958 g          573 t
ORIGIN      
        1 tggctcgacc ccatgatcca gcgcgtttct catcacatgc aacaacggtt cgaacagcgc
       61 ctcgacggtc gctttatcgg cttcggtcaa ctggccttcg accaccagcc gcaccgactt
      121 ccccagatcc tgggccattt cccgcaccag ccgcgggaaa tgttggaaaa catggtgtag
      181 cggcagcacc cgtatgccaa gtacagagcg ctgcagctcg gccacaagcc ggtcgagttg
      241 cgcgtgctga tccttcagcc gccgcgcgaa atcgtctgaa tctgcgccat ctcgtgccag
      301 gcgggcggta tgtccgatcg cgttcttcac gaccgtgagc tcaccagtga gattgaccaa
      361 agcatcgata cggtcggcat cgacgcgcag cgagcggaca atctgggtcc gcggtaccgg
      421 gtcctccgct gtgtcggacg acacgaccgc ctccggcatg gttgccggtg gggcgtcgct
      481 tgcaggaccc tcccccggtt gctgcgccgt ctggtccagc agagccccca gcgcggcgat
      541 gaacgcaaca ccgcttcggt cacgctgact ttggccgatt gcgtcagaca gcgtccggcg
      601 cgcgtcttcc agaccggcgc ggttcaatac gttcatggcg acccgcgcgg ctgagcctag
      661 ccggcccgca aagcccgttg tctcgtcgtt ggcggcaagt cgcagttgct cctgcagaac
      721 cgcgcgagca tcaggcgaga gaaccgaacc ggcgaagcgc acttcggtga ccgggaaaat
      781 ggtgacctga tcggagaccg gcagcagaac cagcgaagct gcgtccggag gggccgccaa
      841 gagtgcggtg ataacaagat tgcacccaaa cggactgaat tcttcgagag cgggccacgg
      901 ctcgaccggc gccagttcca acgccaggat tccgggcagg tcggcgacca gacccaacgg
      961 atcctcggcc cgaaagaagc aatccgggtc aggcgtgtaa cgcagcgctg tctgcacctc
     1021 ggcccgccgc gcggcgtggc gcgccagcaa cggggcgagc cagtccggtg cacctagcga
     1081 cgggttccgg gcgggcacgg cgggcaatgt ggcagccgga gacgtaagtc tggccaccag
     1141 cgcatcggca gcggtgtccg gcaacattgg gatgtcgccc tttgcctcgg tttcctccag
     1201 ccaccgcacg acctgatcaa ggcaggcaag gcagtcgccg atcagttcgg ccgacaccgg
     1261 gcgattgccg ttgcgtattg agtccagcag gctttccgca gcatgcaaga cctgacccat
     1321 aaccaaaaag ccgacgatgc ccgcagcgcc tttcagagtg tgaaagccgc ggaacgcccc
     1381 gtcgatccgg tcctggtcct gcggcgatgt ctcgagcgcc agtaaatcca cggttgccgc
     1441 ctcgaccagt tcgcggcatt cgatcagaaa ttgttgcaaa agatcgttca ttccgatgcc
     1501 ccgcacagca gggcaacatg cgcgagcaac gtcgcccgtg cgaccggttt gaccagatag
     1561 aagttggcgc cggcctcacg cgcaagttct gcgtcccgag gcgcggcttc ggtgctggtg
     1621 accaggaccg cagtggcggc gagaggcagt gcctgacggc gcaacgtgcg cagaaacgtc
     1681 atgccgtcca ttttcggcat gttgacgtcg aggacaatca ggtctgtcgg agtcgtcaac
     1741 agcttttcaa gcgcctccaa cccgttcagc gcttcgtcca cctcgtaccc cgcctcgcgc
     1801 agggtatcgc ggtaatacat ccggaccaga cttgcatcgt cgacaatcat gattcttgcc
     1861 ggctgcaggc ttccgccgct catcggtccg ctcccgggcg ctgataaacg atcgcgtcgg
     1921 aaaagcgcct gacttcgaac agcggcgaga tccggctcat ggactccgtg tgtcccagac
     1981 agaggaagcc gcccggcagc aaactctcat agaggttttc cgccgcaatc cggcgtgacg
     2041 catcatcgaa gtaaatgaga acgttgcggc aaaagatcac atcgaagcgg ccgaacgcgg
     2101 cggtctctgc ggcattcaca aggttggccg gagcgaagtg tacggaccca cggatactgt
     2161 cgtcgatttg ccaccgctcg tctccgagtg agataaaata tttcttgatc agatccacag
     2221 gcaattgcat caatgcacgc tttccaaaca aaccaaggcg agcggcatcc aacacgctgg
     2281 tatcgatatc ggagccgatg atctcgatat cgaactcatc gacccgcggc cagttttgca
     2341 agagccagat ggcgatggaa tagggttcct ccccggttga acatggcaac gaccagatcc
     2401 ggatggcttt ggaggcagcg gcctgcgcca cccgatcgtc caacagatcg tccaacagat
     2461 cgttcgtcag acattgaagt tgatggtttt cccgatagaa ataggtttcg ttgacggtga
     2521 aagcattgat gagttgctcg acctcactca gcgcgtcgat ccgcaggcgg gcaaaatagc
     2581 tggcgaaggt ttgcgaaccg gttgccttca tccgttcgtg gacccttcgc tccacatagt
     2641 aacgtttggc ttcgctgaat accatgccgg tccggcgata gacgaactcg ctcagcctgc
     2701 tgaagtcctc ggtattgagc ggcctgacat cattcatgtc tgaccggacg tccggcgagg
     2761 atgcgttcca tgccgatctt cacggcaaaa gtcaggaacg tcacatcgcc gaaacgtgct
     2821 gcggtcgcct gcagcaccgg cagcgcctcc ggcccgccga catcggcgag aacgtcaacc
     2881 gccgctgcgc agacattggc ttccgtctca tgcgacagca catcgcacaa caaacctgtg
     2941 gcatccgccg ccggcagttc gcgcgccaga tcgcaggcca gcagccggat gtcggcgtcc
     3001 gggtcggcca gcagcgtcgg tagtaccggg cgaacagcgc cgatcatcgc gcgcagcgca
     3061 tcaagcgcgc cggtacgaaa tgcggcatcg tcctctcgta aacaagggat cacggcgtcg
     3121 acacattgcg ggctaccgat gcgaacgaga ctggtgaaga tggcttcccg gacccgcagg
     3181 tccgcttccg tcttaagcgc ttcagc
//
LOCUS       DATAVD010001887         3070 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2040670, whole genome shotgun sequence.
ACCESSION   DATAVD010001887 DATAVD010000000
VERSION     DATAVD010001887.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3070
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2040670"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            213..887
                     /locus_tag="VHX39_35980"
     CDS             213..887
                     /locus_tag="VHX39_35980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEX3996600.1"
                     /translation="MRRLYLPMRIWDLPTRLFHWVLVVLIFAAWLSAWRDWMRVHVVC
                     GLSVLTLLLFRLIWGFIGSDTARVSHFLKSPMAGMQHLLRVFRREQDVEAGHNAAGGW
                     MIILLLALLCVQVGTGLCSNDDIMVEGPLAEFVGKDRSDWLTHIHHVNFTLIEIAISL
                     HVLAIVAYRVLKGHNLLLPMITGKKRLPGATRAPRMMHPILALGVLVFSAMSVALFLL
                     LAGYIP"
     gene            complement(948..1394)
                     /locus_tag="VHX39_35985"
     CDS             complement(948..1394)
                     /locus_tag="VHX39_35985"
                     /inference="COORDINATES: protein motif:HMM:NF013487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEX3996601.1"
                     /translation="MTRKLALVAAPVLGILVGLGGVALAQTFDPIQTRKAGQDLVAGT
                     FAGVKAVITLKGDVKTLEGPGKAIQKWALVFPTLFPAGSDKGDTKAAPAIWTDRAGFE
                     KDAMALSAAGEKLATAAKAGDETAVAAAYKEIGEACGACHKEYRLK"
     gene            1539..2135
                     /locus_tag="VHX39_35990"
     CDS             1539..2135
                     /locus_tag="VHX39_35990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEX3996602.1"
                     /translation="MRETFMTGINSVAVFCGSRLGSRPEFAGAARQLGLGLGHAGIRL
                     VYGGGRNGMMGVLADAVLEAGGTVLGVIPDFLTRSEVAHQGVTEMMVVNSMHDRKRRM
                     AEAADAFVTLPGGIGTMDETVEIISWRQLRLHDKPIYLCDVAGSAASLVSAIDSMIAE
                     GFAPSEAREFFKVVSGVPALLELLGSAPRGTETAGARL"
     gene            complement(2136..>3070)
                     /locus_tag="VHX39_35995"
     CDS             complement(2136..>3070)
                     /locus_tag="VHX39_35995"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3996603.1"
                     /translation="SDAGRRLMSAPFNSSTAICWYNLDSFAKAGLPTDAFPATWPELV
                     ALARTLRDKQAAKYPVIAASVVWAHFEQFSAIHNLPYATDANGFNGLDAELRINSPPH
                     VRNLQRLLDMAKEATFHYTGRDGSGDGAFLSGDAAITFSSSALRGSLVSSAKFRWAPA
                     FLPFDPQVIAQPINSVIGGASFWVLTAPKRSSDEYRAIAEFLRFLAQPDSDAEWSAAT
                     GYVPITHAGYAMAEQHGDLANGADLPVRQLSRGRITDNSRGFHLGRMPEIRTIIEEEC
                     EKALNGEQDAKAALDAAVTRGNKVLRDFQRSVAH"
BASE COUNT          508 a          937 c          988 g          637 t
ORIGIN      
        1 gagtcctgga tgaataaagc aatctggtca ccagtcggaa caccggcgtt ggcgcgatgc
       61 aatcctgcaa aactgatcag gtcaggcgac aggtctcgtg cgatgaggca tatccgcacg
      121 tgaatccgtt ttgcattggc accgtaatgt tgcggaacgt ttcgttcggc cggcgtcatc
      181 cgatgctggt gcgttcaagg gaatcgggct gaatgcgccg actgtacctg ccgatgcgaa
      241 tctgggacct gccgacgcgg ctgtttcact gggttctggt cgttttgatc tttgcagcct
      301 ggctgagcgc atggcgcgac tggatgcgcg tgcacgtggt gtgcggcctg tcggtgctga
      361 ccctgctgct gttccgcctg atctggggct ttatcggcag cgacaccgca cgagtctcgc
      421 actttttgaa aagtccaatg gccggcatgc agcatttgct gcgtgtgttt cggcgcgagc
      481 aggatgtcga ggccggtcat aacgcagccg gcggctggat gatcatcctg ctgcttgcgc
      541 tgttatgtgt gcaggtcggt accggacttt gctccaatga cgacatcatg gtcgaggggc
      601 cactggcgga attcgtcggc aaggatcgca gcgattggct gacccatatc caccatgtga
      661 acttcacgct gatcgagatt gcgatttctc tgcatgtgct ggcgatcgtt gcctatcgcg
      721 tgctgaaggg acacaatctg ctgttgccga tgattaccgg gaagaagcga ttgccgggtg
      781 ctaccagggc accgcgcatg atgcatccga tcctggcgct gggggtcctg gtgttctccg
      841 cgatgtcggt cgcgctgttt ttgctgttgg ccggctatat tccctgacgc ataacccgag
      901 tgggtcccgg ctcgccctct gccgatgcca ggacccgccg gacggcgcta cttcaggcgg
      961 tactctttgt ggcaggcgcc gcacgcctcg ccgatttcct tgtacgccgc ggccaccgcg
     1021 gtctcgtcgc cggctttggc ggcggttgcg agcttctcgc ccgcggccga cagcgccatc
     1081 gcgtcctttt cgaacccggc ccgatcggtc cagatcgccg gcgcggcttt ggtgtcgccc
     1141 ttgtcggagc cggccgggaa caacgtcggg aacaccaggg cccacttctg gatggccttg
     1201 ccgggcccct ccaacgtctt cacgtcaccc ttcaacgtga tcaccgcctt gaccccggca
     1261 aacgtgccgg cgaccagatc ctggcccgcc ttgcgggtct gaattggatc gaacgtctgc
     1321 gccagcgcga cgccccccag gcccaccaga atgcccaata ccggggccgc gaccaaagcg
     1381 agttttctcg tcatcctgaa accttccctt gaactccgtt gcaccccggt ccaatcacgc
     1441 gagtcttttc cgatcagcgc accgcacgat tccgtgccgc cgaacgggaa ccgcgtgatc
     1501 cgttgccagt ttagccgccg tatccggtgg agaccaccat gagggagacg tttatgaccg
     1561 ggattaattc cgtcgccgta ttttgtggct cccgactggg ctcgcgtcct gagtttgccg
     1621 gcgctgctcg ccagctgggt ttgggtctgg gtcacgccgg cattcgcctc gtttatggcg
     1681 gcggcaggaa cggcatgatg ggcgtgctcg ccgatgcggt gctcgaggcg ggcggaaccg
     1741 tgcttggcgt cattccggac ttcctgacca ggtcggaggt ggcgcatcag ggcgtcaccg
     1801 aaatgatggt cgtcaacagc atgcatgacc gcaagcgccg catggccgag gcggcggacg
     1861 ctttcgtcac cctgccgggc ggcatcggca cgatggacga gacggtcgag atcatcagct
     1921 ggcggcagct ccgcctgcac gacaagccga tctatctttg cgacgttgcc ggttcggcag
     1981 cgtcactggt cagcgccatc gacagcatga tcgcggaagg ctttgccccg tccgaggcac
     2041 gggagttttt caaggtcgtg agtggtgtgc cggcgttgtt ggagcttctg ggttcggcac
     2101 cgcgtggcac cgagacggcc ggcgcacggc tgtaatcagt gcgcgaccga gcgttggaag
     2161 tctcgtagca ccttgttgcc gcgcgtcact gcggcatcca gcgcagcctt cgcgtcctgc
     2221 tcgccgttca gggctttctc gcactcttcc tcgatgatgg tgcggatttc cggcatgcgc
     2281 ccgagatgga agccgcgcga attgtcggtg atccgaccgc ggctgagttg gcgcaccggc
     2341 aaatcggcac cgttggcaag gtcaccatgc tgttccgcca ttgcgtagcc ggcatgggtg
     2401 atcggcacat agccggtcgc cgcactccat tcggcgtcgc tgtccggttg cgcgaggaaa
     2461 cgcaagaatt ctgcaatggc gcggtattcg tcggacgaac gtttcggcgc cgtcaacacc
     2521 cagaaactgg caccgccgat caccgagttg atcggctgtg cgatcacctg cgggtcgaac
     2581 ggcaggaacg ccggcgccca gcggaatttg gccgaactga ccaacgagcc gcgcaaggct
     2641 gaggaggaaa aggtgatggc ggcatcgccc gacaggaacg cgccatcgcc cgatccgtcg
     2701 cggccggtat aatggaacgt cgcttctttc gccatgtcca gcaggcgttg cagattgcgt
     2761 acatgcggcg gactgttgat ccgcagttcg gcatcgagcc cgttgaaacc gttggcgtcg
     2821 gttgcgtaag gcaggttgtg gatggcgctg aactgctcga aatgcgccca caccaccgag
     2881 gcggcgatca ccggatattt cgctgcctgc ttgtcgcgaa gggtgcgggc cagtgcgacc
     2941 agttccggcc aggttgccgg aaaagcgtca gtcggcaggc cggctttggc aaagctatcg
     3001 aggttgtacc agcaaatcgc cgtggaagag ttgaacggcg ccgacatcag ccgtcgcccg
     3061 gcgtcgctgt
//
LOCUS       DATAVD010001888         3511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2602241, whole genome shotgun sequence.
ACCESSION   DATAVD010001888 DATAVD010000000
VERSION     DATAVD010001888.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3511
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2602241"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..481)
                     /locus_tag="VHX39_36000"
     CDS             complement(<1..481)
                     /locus_tag="VHX39_36000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010668901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HEX3996604.1"
                     /translation="MAEPDFVQPAHFAFDDESETEIASEIRKYPEGRQASAVLAALYA
                     AQDQMKRQTGSAWVPVKAMDAVAERLGMAPIRVYEIATFYLMFNMAPIGRYHLQLCTT
                     TPCWLRGSDDVVQACRDATGIKGWKETSADGLFTMSEVECVGACVNAPILQVDDDFYE
                     "
     gene            complement(485..1699)
                     /locus_tag="VHX39_36005"
     CDS             complement(485..1699)
                     /locus_tag="VHX39_36005"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HEX3996605.1"
                     /translation="MSATTVPEPGSRTQTVEIDSHSINFGPQHPAAHGVLRLILELDG
                     EIVERADPHIGLLHRGTEKLIEYKTYMQAVPYFDRLDYVSPMCEEHAFALAVEKLLGI
                     TAPDRAQWIRVLFAEITRVLNHLLNVTTYALDVGAITPSLWGFEEREKLMEFHEAASG
                     ARLHANYFRPGGVSKDLPVGLTDRIGEWAETFPKFVDDLQTLLTANRIWKQRTVDIGV
                     FSAEQALAWGFSGPPLRASGVPWDLRRAQPYDKYAEVEFKVPVARNGDCYDRYLLRMV
                     EMRESVEIIKQCLAKMQPGPIKVQDHKFSPPHRSEMKRSTEALIHHFKLYTEGYHVPA
                     GSTYTVVETPKGEFGVYLVADGTNKPYRCKIRPTGFAFLQAIDVMAKRHMLADVCAII
                     GSLDVVFGEIDR"
     gene            complement(1710..2267)
                     /locus_tag="VHX39_36010"
     CDS             complement(1710..2267)
                     /locus_tag="VHX39_36010"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEX3996606.1"
                     /translation="MRSTSIRLEELTAFADCDGLLALMTTLRDDPRFAFEQLMDVCGV
                     DWPERTQRFDVVYNLLSVSLNQRLRVIVTTDAETPVASVHEIWPVATWWEREAWDLYG
                     IIFSGQPDLRRILTDYGFEGHPLRKDFPLTGYIEVRYDEDRKAVVYEPVQLTQDFRSF
                     DFLSPWEAITTLPGDEKVQSTRAKE"
     gene            complement(2344..2895)
                     /locus_tag="VHX39_36015"
     CDS             complement(2344..2895)
                     /locus_tag="VHX39_36015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003620737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HEX3996607.1"
                     /translation="MNDTTIAWNRNHLPPGPEQDAVIKGITGEIADKGFIVANVDKIV
                     NWARTGSLWPMTFGLACCAVEMIHAYMPRYDLDRLGIIPRASPRQSDVMIVAGTLTNK
                     MAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSIVRGCDRIVPVDVYVPGCPPTA
                     EALVYGIMQLQKKIRRTGTILRG"
     gene            complement(2900..3265)
                     /locus_tag="VHX39_36020"
     CDS             complement(2900..3265)
                     /locus_tag="VHX39_36020"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEX3996608.1"
                     /translation="MQPLLYGYLPILVFLVIAGGIAVAMLGGSLLAGHQKPYAEKLSA
                     YECGFEAFDDARRRFDVRYYLVAILFIIFDLEVAFLFPWAVSLGDIGLFGFWSMVVFL
                     GVLTIGFAYEWCKGALEWE"
BASE COUNT          724 a         1090 c         1047 g          650 t
ORIGIN      
        1 cttcgtagaa atcatcgtcc acctgcagga tcggggcatt gacgcaagca ccgacgcact
       61 cgacctcgga catggtgaac aaaccgtcgg cgctggtttc cttccaccct ttgatgccgg
      121 tggcgtcacg acaggcctgc accacgtcgt cggacccacg tagccagcat ggcgtcgtcg
      181 tgcatagttg caaatgatac cggccaattg gcgccatatt gaacatcagg taaaatgtgg
      241 cgatttcgta cacccggatc ggtgccatgc cgagacgttc agccaccgcg tccatcgctt
      301 tgaccggcac ccaggcactg ccggtttgcc gcttcatctg gtcctgtgcg gcatataacg
      361 cagcgagcac cgcactggcc tgccggccct caggatactt gcggatttca ctggcgatct
      421 cggtctccga ctcgtcgtcg aaagcgaaat gcgcgggctg tacgaagtcg ggttcggcca
      481 tggtctacct gtcgatctcg ccgaacacga cgtcgagcga tccaatgatc gcacacacgt
      541 cggccagcat gtgccgcttc gccatgacat cgatcgcctg caaaaaggca aatcccgtcg
      601 ggcggatctt gcaacgatag ggtttgttgg taccgtcggc gaccagatac acgccgaact
      661 cgccttttgg cgtttccacg accgtatagg ttgatcccgc cggcacgtga tagccttcgg
      721 tatacagctt gaagtgatgg atcagcgcct ccgtcgagcg cttcatctca ctgcgatgcg
      781 gcgggctgaa tttatggtct tgcaccttga tcgggccagg ctgcattttc gcgaggcact
      841 gtttgatgat ctcgacactt tcgcgcatct cgaccatgcg gagtaaatag cggtcgtaac
      901 aatcgccatt gcgggcaacc gggaccttaa actccacctc ggcgtatttg tcgtacggct
      961 gagcccgccg caaatcccag ggcacgccgg aggcgcgcag tggcggtccg gaaaatcccc
     1021 aggccagggc ctgctcggcc gagaacacgc cgatatcgac ggtgcgctgc ttccagatcc
     1081 ggttggcggt cagcaaggtt tgcagatcgt cgacgaactt cggaaacgtc tcggcccatt
     1141 cgccgatccg gtcggtcagg ccgacgggca ggtccttcga tacgccaccg ggacggaagt
     1201 aattggcatg cagacgcgcc cccgaggccg cctcatggaa ttccatcagc ttctcacgct
     1261 cttcgaaacc ccagagcgac ggcgtgatgg cgccaacatc cagcgcatag gtcgtcacat
     1321 tcagcagatg gttcagcacc ctggtgatct cggcgaacag cacgcggatc cattgcgcgc
     1381 gatcgggtgc ggtgatgcca agcagtttct caaccgcgag agcgaaagcg tgctcttcgc
     1441 acatcggcga tacgtaatcg agacggtcga aatacggcac cgcctgcatg taggtcttgt
     1501 actcgatcag cttttcggtg ccacggtgca acaggccgat atggggatcg gcgcgctcga
     1561 cgatctcgcc gtccagttcc aggatcagtc gtaacacgcc gtgtgccgcc ggatgctgcg
     1621 gaccgaagtt gatcgagtgg ctgtcgatct cgacggtctg ggttctgctg ccgggttcgg
     1681 gaactgttgt cgcactcatc gctgcaggat cactctttgg cccgtgtgga ctggactttc
     1741 tcgtcgcccg gcagggtcgt aatcgcctcc cacggtgaca ggaaatcgaa actccgaaaa
     1801 tcctgggtca gctgcacggg ttcgtagacg accgccttgc gatcctcatc gtaacgcacc
     1861 tcgatatagc cggtcagtgg gaagtccttg cgtaacggat gaccttcgaa gccgtaatcg
     1921 gtcaggatgc ggcgcagatc gggctgaccc gagaagatga tgccgtacaa atcccacgcc
     1981 tcgcgttccc accatgtggc gaccggccag atctcgtgca ccgaggcgac cggggtttcc
     2041 gcatcggtgg tgacgatcac gcgcagccgc tggttcaacg agaccgacaa caaattgtaa
     2101 acgacgtcga agcgttgggt gcgctccggc caatcgacac cgcagacgtc catcagttgc
     2161 tcgaaggcga accgcggatc gtcccgcaag gttgtcatca acgccagcag cccatcgcaa
     2221 tcggcgaaag cggtcagttc ctcaagccgg atcgacgtgg aacgcacggc tggcagcgag
     2281 ccgaccaaat gacccaactg ctccaacctg gttggcacag ggtcggcagc cactggcggt
     2341 tcctcagcca cgaaggatcg tcccggtgcg gcggattttc ttttgcaatt gcatgatccc
     2401 gtagaccagc gcctcagcgg tcggcgggca gccgggcaca tagacatcca ccggcacgat
     2461 ccgatcgcag ccgcgcacga tggagtagga gtaatggtaa taaccgccgc cgttggcaca
     2521 actgcccatg ctgatgaccc agcgcggctc cggcatctga tcgtagactt tgcgcagcgc
     2581 cggcgccatt ttgttggtca gcgtgccggc aacgatcatg acgtcgcttt gcctcggcga
     2641 ggcgcgcgga atgatgccaa gccggtcgag atcgtagcgc ggcatatagg catggatcat
     2701 ctcgaccgcg caacaggcca gcccaaacgt catcggccaa agactgccag tgcgagccca
     2761 gttcacgatt ttgtcgacgt tggcgacgat gaagcctttg tcggcgatct caccggtgat
     2821 gcccttgatc accgcgtcct gctcgggacc gggcggcaga tggttacgat tccaggcgat
     2881 cgtggtgtcg ttcataggat cactcccact ccagcgcgcc tttgcaccac tcgtaggcga
     2941 agccgatcgt cagcacgccg aggaacacca ccatcgacca gaagccgaaa agcccgatat
     3001 caccgagcga taccgcccac ggaaacagaa aggccacctc aaggtcgaag atgatgaaga
     3061 ggatggcgac caggtagtag cgcacgtcga accggcggcg ggcgtcgtcg aacgcctcga
     3121 agccgcattc gtaggcggat agtttttcgg cgtagggctt ctggtggccg gcgagcaagg
     3181 agccgcccaa catggcgacg gcgatacccc cggcaatgac caggaagacc aggatgggca
     3241 ggtacccgta gagcagcggt tgcatgggat cagtaacctt acgtcatgcc acgcgggggc
     3301 gatccggatt ccgttgaaac cagaccaccc ctaccacgcg cgcggaccat aaccaaagac
     3361 ctccggtccc gccatagggc caggccgtga aaaacgccgc cgtcgggcaa attggaaagc
     3421 acctgcggtt gcctggccac accggcggcg cgacactgcc gtgaccaggc cgggggacgc
     3481 gactcatggg cgaactgcgc aacgccgaca t
//
LOCUS       DATAVD010001889         2589 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3152033, whole genome shotgun sequence.
ACCESSION   DATAVD010001889 DATAVD010000000
VERSION     DATAVD010001889.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2589
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3152033"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1597)
                     /locus_tag="VHX39_36025"
     CDS             complement(<1..1597)
                     /locus_tag="VHX39_36025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996609.1"
                     /translation="MAMVRLCLWLLVTLSLAAVPWQAAHTQQKPAPQPNGSSATAPAA
                     ATPAATPFGALSPEQARAALDTLNDPKKRAAFAATLESLVKADPPPPAEGPPPPGTPA
                     TAAPPPAPPPAPEGIPIQLEPNSLGAQVLLSASAFLHRTANELPRLLETMQSIPQFSA
                     WVVVMVTNPIGQKLLTNAGWRLAVTLALALGVAEALRFVLRRPMARVIRLGEPPPVPV
                     DDEEEDPESRAERGAIEGPPQLEFDDDERDIIGPRVRLGFARFALQMVPVLGFLLVGH
                     MAAATQLGGAEGSRLVILAVLDAIGGSQALLALMTLLFEPAPPGLQLLPLRPAAGRYL
                     IRWTRRLILIGVPGYAIGEVALLLGLSPTAHAALQKAVGLVLMVCLGIIVVQRRRPVR
                     LWLSAPPEATGIAARLRNAAARRWYSLALLFLAAIWLAWTLRAPDAVERIIWHLGATI
                     LVLVAAALVRLAVIALLGTIQPKDDTAGSPAHPARVRLCVYQPALQKLATLLINAIAF
                     LGLLQLYGLSGLTWLATSDVGRRV"
     gene            complement(1755..2453)
                     /locus_tag="VHX39_36030"
     CDS             complement(1755..2453)
                     /locus_tag="VHX39_36030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3996610.1"
                     /translation="MMLEVEDLHAFYGKSHILQGVHLSVGDGEIVSLLGRNGVGRSTT
                     CKAIMGLVDPVGAVRFRGRDMSGLKSNLIARAGIGYVPEDRQVFPTLTVYQNLQLGLK
                     RAGRFGRWTFDDVFRRFPNLAARRNNPAGVLSGGEQQMLTMCRTLMGDPDLILIDEPT
                     EGLAPMLVEQVGNLLEEIARRGVSILLVEQKLTIAMRISQRLYVMGHGRIVFEGTPAD
                     IDANADVRREWLEV"
BASE COUNT          477 a          860 c          865 g          387 t
ORIGIN      
        1 cgacccgacg gcccacgtcg ctggtcgcca gccaggtcag gccgctcaga ccgtagagtt
       61 gcagcaggcc aagaaaagcg atggcattga tcaacagtgt cgccagcttc tggagcgccg
      121 gttgatagac acagagccgt acccgggccg gatgcgccgg gctccccgcg gtgtcgtctt
      181 tcggttgaat cgtgccgagc aaagcgatca ccgcaagccg gaccagtgcc gcagcgacaa
      241 gcacaaggat cgtcgctccc aaatgccaga tgatccgttc gactgcgtcc ggcgcccgca
      301 aggtccaggc cagccagatc gcggccagaa agagcaacgc caggctatac caacgacggg
      361 ctgctgcgtt gcgcagccgc gccgcgatgc cggtcgcctc gggcggggca ctgagccaga
      421 gccgcaccgg ccgccgccgc tgcacgacga tgatcccgag gcagaccatc agcacgagcc
      481 cgaccgcctt ctgcaacgcc gcgtgggcgg tgggcgacaa gccaagcagc agggcgacct
      541 cgccgatggc ataaccgggg acgccgatca ggatcagccg tcgcgtccag cggatcagat
      601 acctgcctgc ggcaggccgt aaggggagca attgcaggcc gggcggcgca ggctcgaaca
      661 gcagtgtcat cagcgccaac agcgcctggc tgccaccgat cgcgtccaac acggcaagaa
      721 tgaccagccg gctgccctcc gcgccaccga gttgcgtggc ggcagccata tgtccaacca
      781 gcaggaagcc cagtaccggc accatttgca gcgcaaaccg ggcaaaaccg agtctgacgc
      841 gtggtccgat aatgtcccgt tcgtcgtcgt cgaattcgag ttgcggcggc ccctcaatgg
      901 cgccgcgttc ggcacgggat tcgggatctt cctcttcgtc gtcgactggc accggcggcg
      961 gctcgcccaa tcggatgacc cgggccatag ggcgccgcag tacaaagcgc agcgcctcgg
     1021 cgaccccaag tgccagggcc agagtgaccg caagacgcca acccgcattg gtcagcaatt
     1081 tctgcccgat gggattggtc accatgacca caacccaggc cgagaactgc ggaatgctct
     1141 gcatcgtctc gagcaaacgc ggcaactcat tcgccgtacg gtgcaaaaaa gccgacgcag
     1201 acagcaacac ctgggcgccc agactgttgg gctcgagctg gatcgggata ccctcgggcg
     1261 cgggaggtgg cgcgggaggt ggcgcggcag tcgcgggcgt accaggcggc ggcggtcctt
     1321 ccgccggagg tggcgggtct gctttgacga ggctttcgag ggtcgcagcg aaggcggccc
     1381 gtttcttcgg gtcgttcagc gtgtcgagtg cggcgcgggc ctgctcgggg gaaagcgcgc
     1441 cgaacggagt cgccgccggc gtggctgcgg ccggcgcggt ggcggacgat ccattgggct
     1501 ggggcgccgg cttttgctgt gtgtgcgcgg cctgccacgg cacggcggcc agcgagagcg
     1561 tcaccaacag ccataagcag agacggacca tggccatgtg cgaccacgat ccggcgtgct
     1621 ggtcaaccgg gatactacct gcgccgccgc gccgcacggc gtctcgcagt ccgcacctgg
     1681 tcagacactg cgggggcctg aggcgcggcc aggccttcgt tgttcggaat gtgcggagtt
     1741 gcaggaggcg atcatcagac ctccagccac tcccggcgga catcggcgtt cgcatcgata
     1801 tcggccgggg tgccctcgaa cacgatccgg ccatgcccca tcacgtaaag ccgctgcgaa
     1861 atccgcatgg cgatagtcaa cttttgctcc accagcagga tcgacacccc tcggcgggcg
     1921 atttcttcca ggagattgcc aacctgctcg accagcatcg gagcgaggcc ttcggtcggc
     1981 tcatcgatca ggatcaggtc gggatcgccc atcagggtgc ggcacatggt cagcatctgc
     2041 tgctcgccgc cggacaggac cccggccgga ttgttgcgcc gggcggccag gttgggaaac
     2101 cgcctgaaca cgtcgtcgaa agtccaccgc ccgaagcggc cggcgcgctt caggccgagt
     2161 tgcaggttct gatacaccgt cagcgtggga aacacctgac ggtcctcggg cacatagccg
     2221 atacccgcgc gggcaatcag gttggatttc agcccggaca tgtcccggcc gcgaaaccgc
     2281 accgcgccga ccgggtcaac gaggcccatg atcgccttgc aggtggtcga gcggccgacg
     2341 ccgttgcggc cgagcaggct gacgatctcg ccgtcgccga ccgacagatg gaccccttgc
     2401 aggatgtggc tcttgccata gaacgcgtgc agatcctcca cctcgagcat catggcgact
     2461 gagcaggggt ttcaccccgg accccgacca ggggcgctgc ccctggacct cgccaagggc
     2521 ggcggccctt ggaaccattg atatgggcgg ttgtatgagg agggccaacc gggacgttgc
     2581 aacgtttcg
//
LOCUS       DATAVD010001890         6508 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1477536, whole genome shotgun sequence.
ACCESSION   DATAVD010001890 DATAVD010000000
VERSION     DATAVD010001890.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6508
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1477536"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..935
                     /locus_tag="VHX39_36035"
     CDS             <1..935
                     /locus_tag="VHX39_36035"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX3996611.1"
                     /translation="GHAEIWNKLLSLTSPRPGGIGGWDGLPAPLPRSQRPEIMAAIGG
                     IDIALWDIKGKAANLPVFRLLGGTRTEVFTYATGGFYSEGAALESYAPEFARFTAEGY
                     RAVKLKTGALSIPDELRRIETIRTAIGPDVLLMLDMNATYDVNGCIEFAKAVAAFDIF
                     WLEEPLFWHLQPADFRRLADAVSIPLAHGERELHRFTVRDFIDSGAIRFVQFDSTRAA
                     GFTESLRIAHYAEQKGVSISPHSAPHLHAHLVSAFGDAAFAAESFGVSDTRHPIQNAI
                     YQGGIKVKAGMVQLSEAPGFGMGIDWHAVERFRG"
     gene            1340..2194
                     /locus_tag="VHX39_36040"
     CDS             1340..2194
                     /locus_tag="VHX39_36040"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEX3996612.1"
                     /translation="MNLRDILVFLDEGTAAPGRLELAITVARDHGASLSAVFLQSNRV
                     PDLPPGRATPWLGLGVGPAVAGAIMTSPRVLPADDAEQQFRDRLRSANVKGDWYPVDR
                     SDTAELIMLAQAADLVVIGQADPGARAAPTWRPEEIVIGCGRPVLMIPYVGRYPQVGH
                     RVLVAWDGSREAVRALNDALPLIRAADVVTVMTVRARPKSRETSGGSMDRVLHHLSRH
                     GINARPVEALQSGIAISDVLLSRSVDLAADLIVAGAYHHSQLRETLLGGVSRALFQRM
                     TLPVLMSH"
     gene            complement(2677..4038)
                     /locus_tag="VHX39_36045"
     CDS             complement(2677..4038)
                     /locus_tag="VHX39_36045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEX3996613.1"
                     /translation="MTATVPASANPASAGLQPVIGIVDDDPIMGESLVQRLQLEGYRA
                     IWWQSGEEALSHLPGAGCRVLVCDIRLPDLDGEQLFRRALPGLGATPVVFITAFGEVE
                     QAVRLMQAGADDYVTKPFAIEVLLHKIAALCAREIAAGSGTTGRETLSASAAMRGVET
                     ELLRVTDMASPVLLLGETGVGKEVAARQLHNASMRRDQPFVVVSCATIPVDRAESEMF
                     GHERGGVVGSRIAHVGLVEQAGRGTLFLDEVAALPPLLQGKLLRLLEDGSYRRLGGTQ
                     EFVSEARIVSSSNADLPALVAGGIFRADLYYRLNVIELRIPPLRSRGEDIIPLAEHYL
                     AQFARGAGHRVPSLTPSARAALREHGWPGNVRELRNRLERAAALASGAPQIGGQTIFP
                     EQVLLDRPAERVASLAEARERAERRHIEEALSQTNGEIAKTAVLLGISRTTLWEKMRR
                     LGL"
     gene            complement(4035..5534)
                     /locus_tag="VHX39_36050"
     CDS             complement(4035..5534)
                     /locus_tag="VHX39_36050"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEX3996614.1"
                     /translation="MREQRWWTMWQRPWPLTARVPIVSGALILAVAVAVSHVLMSTVA
                     YEQELSVRRLAAVYLDGISTTVYPHIVARNLANTSEALNRTMWFHQSMREERAMVRLP
                     DGTLFADVSAKTGDASTKDPIHDAALGRRLDRGSGFVFDEKTGTGWARRAIVREGRHV
                     ADLYVALELKPLVKERHALRRNLLMATISASLAAAAIGFMIVRRMVLPLRLLTERLRR
                     AQAGDIAIVPPAMLPPASTEYGRLLRGYNGLAQALDEREAMAARLAQREQESVLGRLA
                     ATVAHEVRNPLGGMATALDTVRKFGDDPDVRSKSLDLVERGLWSIRNVVDSVLAFHRM
                     PPDSRRLTPSDLEDLRVLIEPELARRHLRLSWQSSIEATVDAAATETRQIALNLLLNA
                     CEASPPGSEIGFHAWVGAGPDQVGSIALNLEVVDDGPGLPQPVAAALTELGVSTAQDP
                     PRGLGIRVVRDLVRGLGGRIVATTAAGDHGSRIVVTLPPGGGTSWRAMT"
     gene            5919..6047
                     /locus_tag="VHX39_36055"
     CDS             5919..6047
                     /locus_tag="VHX39_36055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996615.1"
                     /translation="MPVPRDREQLKPSFIAIFMEHPVITLIAAMAVAVVVFSHLMT"
     gene            6193..>6508
                     /gene="hisE"
                     /locus_tag="VHX39_36060"
     CDS             6193..>6508
                     /gene="hisE"
                     /locus_tag="VHX39_36060"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HEX3996616.1"
                     /translation="MGFEIDFDPATRSGRKVPAEPVSLPRPQGGPDVLNRLWVIIENR
                     KNADPDISHSARLLARGTARVAQKLGEEAVECLIEAIAGNRDGLIGESADVLYHLLVT
                     WVD"
BASE COUNT         1145 a         1967 c         2120 g         1276 t
ORIGIN      
        1 tgggccatgc cgaaatctgg aacaagctgc tgtcgctgac ctccccgcgg cctgggggca
       61 tcggcggctg ggacggtctg ccggccccgc tgccacgtag ccagcggccc gagatcatgg
      121 cggcgatcgg cgggatcgac atcgcgcttt gggacatcaa gggtaaagcc gccaatctgc
      181 cggtgtttcg tctgctgggg ggcacccgca ccgaggtctt cacctacgcc accggcggat
      241 tctacagcga aggcgccgcg ctggagtctt atgcgccgga attcgcccgt ttcaccgccg
      301 aggggtaccg cgccgtcaaa ctgaagacgg gcgccctgtc catcccggat gagttgcgac
      361 ggatcgagac gatccgtacg gcgatcggtc ccgatgtgct gttgatgctc gacatgaacg
      421 cgacctatga cgtgaacggc tgcatcgaat tcgccaaagc tgtcgcggcc ttcgacatat
      481 tctggttgga ggaaccgctg ttctggcacc tgcagcctgc cgacttccgc cgcctggccg
      541 atgccgtctc tatcccgctg gcccacggcg agcgcgaatt gcaccgattc accgtccgag
      601 acttcattga ttcgggggcg atccggttcg tgcagtttga ctccactcgg gctgccgggt
      661 tcacggagtc gctccgtatc gcgcattatg ccgagcagaa aggcgtcagc atctcaccgc
      721 atagtgcccc gcatttgcac gcgcatctgg tctcggcttt cggcgatgcg gcgttcgcgg
      781 cggaatcctt tggtgtgtcg gacacccgcc atccaatcca aaacgcgatc tatcaaggcg
      841 gcatcaaagt caaagccggc atggtccaac tcagcgaagc accagggttt ggaatgggga
      901 tcgattggca cgccgtcgag aggttccgcg gctaagcacg tcaggcgtat gatgccgagg
      961 ggcgttgctt cataggcgtc acgcgaatgt gatatgttca ataatccgaa cgtcccgcag
     1021 tgaacccgtt cgggacaaca aacgttgtcg gcctgtcctg gccggtgtgc atttgataga
     1081 cggcgatttt tttcgttccc tattgtgtcc gaatgcgctg gcttttcgcg gagatgatat
     1141 tttcctcgaa gagaacccgg gtctcttgag ttgtatatct tgcttcgcaa gaccctgaga
     1201 tgaattgtca ccattaaaag ctcgatcggt gaacggccag cgtgaacctg cacctccctc
     1261 gctatgcgtc ttcctggggc aagggagaga atggatacgg aatgaatgcg ggacggtctg
     1321 gctgggtggg gaggagtgga tgaatctcag ggatattctc gtttttctcg atgagggcac
     1381 cgccgcgccg gggcgccttg agttggcaat cacggttgca cgggatcatg gcgcgtctct
     1441 cagcgcggtg tttctgcaaa gcaatcgtgt gcccgactta ccccctggcc gcgcgacacc
     1501 gtggcttgga cttggcgtgg ggccagcggt cgccggtgcg atcatgacct cgccgcgcgt
     1561 cctgcccgcc gatgacgccg aacaacagtt tcgcgatcga ctccgttctg ccaatgtcaa
     1621 aggtgattgg tatccggtgg atcgaagcga taccgcggaa ctgattatgc tggcgcaggc
     1681 agccgatctg gtcgttatcg gccaggcaga ccctggtgcc cgggccgcgc caacgtggcg
     1741 accggaagaa atcgtcatcg gctgtggccg gccggtgctg atgatccctt atgtcggtcg
     1801 gtatccccag gtcggccacc gcgttctggt tgcctgggac ggctccagag aagccgtgcg
     1861 ggctctcaac gatgcgctgc cgctgatccg tgcggcggat gtggtgacag tgatgacggt
     1921 gcgcgcccgt cccaagagcc gggaaaccag cggtggatcg atggatcggg tcctgcacca
     1981 tctgtcacgg cacgggatta atgctcgtcc ggtggaagcc ctgcagtcgg gtatcgcgat
     2041 atccgatgtg cttctctcgc gatccgttga tctggccgcc gatctgatcg ttgcgggtgc
     2101 ttaccatcat tcgcaactgc gggagacgct gctcggaggc gtcagccggg cgctgtttca
     2161 gcgcatgact ctgcctgtac tgatgtcgca ctgactcatg ccttccggct tccgggcgat
     2221 cacgccactg gttcaaatca gtgggttcgt gccgtccaaa ttgagccacc agcgtttgat
     2281 tttgtgggcc gtttcacccg atcgcgtgat accagtccgc attgagaccg actctctacc
     2341 ggccgtgcct cgtcgtgccg ccggcggtcg gtgtccatgt cttttgcttt tccaatcaaa
     2401 gacatagatg gcggggcgtc cgcccaccat gacggtgaga ggccggtttc agtgtgtcac
     2461 cgtttcggcg ggctgatatg agattctccc gtcgggatcg gcaagttata ccaatcgccc
     2521 ttgatgttga cccatcggca gcgccgtgca accgtcatgg cgagcgcagg ctcgctctcc
     2581 atgcctttgt tttcgcacgt aaaaagcgtg gataccggca tgcgccggca tgacagacgg
     2641 ggtcaaccga agagtctgta tcaatgccgg ttggtattat agacccaatc tccgcatctt
     2701 ctcccaaagg gtcgtgcggg agatgccgag cagaacggcg gtcttggcga tctcaccgtt
     2761 ggtttgggac agtgcctcct ctatgtgccg acgttcagcg cgttcacgtg cctccgcgag
     2821 gctcgcgacc cgctcggccg gccgatcgag caatacctgc tctggaaaga ttgtctggcc
     2881 accgatctgc ggcgcgccgc ttgccagtgc cgccgcacgc tccagacgat tacgcagttc
     2941 ccggacgttt cctggccaac catgctcgcg gagtgctgct ctcgcggacg gggtcaacga
     3001 tgggacgcga tggccggctc cgcgcgcgaa ctgtgcaagg taatgttcgg cgagagggat
     3061 gatatcctca ccccggctcc gaaggggggg aatacgcagt tcgatcacgt tcagccgata
     3121 gtagagatcg gccctgaata ttccgccggc aacgagcgcg ggcagatcgg cattgcttga
     3181 cgagacgatg cgggcctcgg acacgaattc ctgggtgcca ccgagcctgc ggtagctgcc
     3241 gtcttccaac aggcgcagaa gcttgccctg cagaaggggc ggaagtgccg ctacctcatc
     3301 caaaaacaga gtgccgcggc cggcctgttc aaccagaccg acatgggcga tgcgtgagcc
     3361 gaccacgccg ccgcgctcat gaccgaacat ctcgctctcg gcccggtcga ccgggatcgt
     3421 tgcacaactg acgacgacga agggctggtc ccgccgcatc gaggcgttgt gcagttgacg
     3481 tgcggcgact tccttgccga cgccggtctc gccaagcagc aagaccgggc tggccatgtc
     3541 ggtgacgcgc aaaagctcgg tttcgacgcc gcgcatcgct gccgaggcgc tcaatgtttc
     3601 gcggcctgtg gtgccgctgc cggcggcgat ttcgcgggcg caaagggcgg cgatcttgtg
     3661 cagcagcacc tcgatcgcga atggtttggt cacgtaatcg tcggcgcctg cctgcatcag
     3721 acgcacagcc tgctccacct cgccaaatgc ggtgatgaag accaccggtg tcgctcccag
     3781 gccgggaagg gcccgtcgga acagttgttc gccatccaga tccggcaggc ggatgtcgca
     3841 gaccagaacc cggcagccgg caccgggcag atgggacagc gcttcctcgc cggattgcca
     3901 ccagattgcg cggtagccct ccaactggag acgctgcacc agcgattcgc ccatgatcgg
     3961 atcgtcatcg acgatgccga tgacaggttg gagtcccgcg gatgccgggt tggccgaggc
     4021 cggtacggtt gctgtcacgt catggccctc cacgatgtcc cgccacctgg cggcaacgtc
     4081 acgacaatgc gcgatccatg atccccggcc gcggtcgttg caacgatgcg accaccgagg
     4141 ccacgaacga gatcacgcac aacacggatg ccgagaccgc ggggtggatc ttgcgcggtg
     4201 gagacgccca gttcggtgag tgcggcggcg accggttgcg gaagtccggg gccgtcgtcg
     4261 actacctcca ggttcagcgc tatcgacccg acctggtcag gccccgcgcc gacccatgcg
     4321 tgaaagccga tctcgctgcc cggcggcgat gcctcacagg cgttcaggag aaggttgagg
     4381 gcgatctgcc tggtttcggt cgcggcggcg tccaccgttg cctcgatgct gctttgccag
     4441 gacagccgga ggtgccggcg ggcgagttcg ggttcgataa ggacgcgcag atcttccagg
     4501 tcgctggggg tcagccttcg gctgtcgggt ggcatgcggt gaaaggcgag gactgaatcc
     4561 acgacgttgc gtatgctcca caggccgcgt tcgaccaggt cgaggctttt gctccggaca
     4621 tccggatcgt cgccgaattt gcgcactgta tcgagcgccg tcgccatgcc gccgagcggg
     4681 ttgcgcacct cgtgcgccac ggtggcggcg agccgtccga ggacactctc ctgctcgcgc
     4741 tgggccagac gggcggccat ggcttcccgc tcatccaacg cctgcgcaag cccgttgtag
     4801 ccccgcagca ggcggccata ctcggtcgat gcagggggca gcatcgcggg cggcacaatg
     4861 gcgatgtcac cggcctgggc gcggcgtaag cgttcggtca gcaggcgaag cggcaggacc
     4921 atgcggcgca cgatcatgaa gccgatggcc gcggcggcca aactcgcgga gatggtcgcc
     4981 atcagcaggt tgcggcgaag cgcgtggcgt tccttgacga gcggtttcaa ctccagtgcc
     5041 acatagaggt cggcgacgtg cctgccctct cgcacgatgg cacgcctggc ccagcccgtg
     5101 ccggtttttt cgtcgaagac gaagccgctg ccccgatcaa ggcggcggcc gagggcagca
     5161 tcgtggattg ggtctttcgt gctcgcgtcg cccgtcttgg cggatacatc ggcgaacagc
     5221 gttccatccg gcaggcgcac cattgcccgt tcttcacgca tgctttggtg gaaccacatc
     5281 gtgcggttca gggcttccga ggtgttggcg aggttgcggg cgacgatgtg cggatagact
     5341 gtcgtggaga tgccatcgag gtagacggcg gccaggcgcc gcacgctgag ttcctgttca
     5401 taggcgactg tggacatcag gacatgcgat accgcgaccg cgacggccag gatcagggcg
     5461 cccgagacga tcggaacccg cgccgtcagc ggccagggtc gctgccacat cgtccaccag
     5521 cgctgttcac gcatctgtga agcgttcgaa tagcctgacg cgacctttcg ggggttgtcc
     5581 ggaaagccgc acgtggcggg gtttgcctgc tcagaatcca ttggggaggc gccttcaaga
     5641 ttattccgat agtgctacga gagcactgct gctgtcggca gtcttttcgt acccgggatg
     5701 gaatcagact gccgccgaat attcgtcgtt gcccatcttc ggtcgaacga cactttctaa
     5761 agccggttcg acggccggtc gaggatttcg tgtttcgagg tacagaatga agacggcggt
     5821 ttggaggctt ttgtcccgat tggcagtttc ggcgatgcgc actcgccatt cgggtggggg
     5881 tgggtgtccc ggtcatgtcc ggagcggagc gtaaacgaat gcccgtgccc cgcgaccggg
     5941 aacaactgaa gccaagcttt atcgccatct tcatggaaca tccggtcatt acgctgatcg
     6001 cggcaatggc ggttgccgtg gtggtgttca gccatctgat gacctgatgc aggcgacttg
     6061 acgcctgacg ggtttgccga ttacgcgacg ggggccgatc acatggcgaa gcctacaaag
     6121 aagactgctt catcgtcgac tgcgcgcgag aagaagcgga cggcgaaggt cggaaagcca
     6181 gcacggacac ccatggggtt cgagatcgat ttcgatccgg caacccgatc aggccggaag
     6241 gttcctgctg aaccggtgtc gttgccaagg ccgcagggcg gcccggacgt gctgaaccgg
     6301 ctatgggtca tcatcgagaa tcgcaagaat gccgatccgg atatcagcca ttcagctcgg
     6361 ctgctggccc ggggaacggc gcgggtggcc cagaagcttg gcgaggaggc ggtcgaatgc
     6421 ctgatcgagg cgattgcggg taaccgcgac ggcctgatcg gggagagtgc cgatgtgctc
     6481 taccacctgc tcgttacgtg ggtggacg
//
LOCUS       DATAVD010001891         2083 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2040987, whole genome shotgun sequence.
ACCESSION   DATAVD010001891 DATAVD010000000
VERSION     DATAVD010001891.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2083
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2040987"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1257
                     /locus_tag="VHX39_36065"
     CDS             <1..1257
                     /locus_tag="VHX39_36065"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat-containing
                     glycosyltransferase family protein"
                     /protein_id="HEX3996617.1"
                     /translation="ALHALNALSEAENHFRGALRLDPDHANAMLNLGVIRQSLGHLEE
                     AETLYRRARALGADEPRVCNNLALALAELGHLDAAETVCRDALIANPNYAEAAVNLGM
                     ILLMQFRLDEGWRWYEARWRVPPLLSMAQLPVETRWTGAEPVDGKTILLLGEQGFGDV
                     LQFCRYAPMVAGLGARVILAVPETLRRLVRSLPRVAQVVSQDDALPAFDLHCPLMSLP
                     MAFGTTAENIPCRVPYLAADPDAVASWDSIIPPSGVQVSGTAGLRIGLVWAGASRPQQ
                     PHAAAIDRRRSMKLSQMAPLGARSGNVFVSLQLGPPASQIETAPFPLIDVADRLNDFA
                     DTAALVATLDLIITVDTSAAHLAGALGKPVWLLSRHDACWRWGRDRDDSPWYPTMRLF
                     RQTTPGDWAGVIERVAASLPGFQVIG"
     gene            1320..>2083
                     /locus_tag="VHX39_36070"
     CDS             1320..>2083
                     /locus_tag="VHX39_36070"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3996618.1"
                     /translation="MFSNHLEIRPMSGTAGAEIGGVDLSGAMSDATVEAIRGVLADYG
                     VVVFRDQTLTPEQHISVARHFGKININRFFAHADGYPEIALVSKEPDQTANIGGGWHT
                     DHSYDERPALGSMLYAREVPPRGGDTMFASMYAAYDALSDGLKQTLSGLRAVHSSRHV
                     FGVERPAMRGRIGNPELATQDAIHPVVITHPESQRRALYVNPGFTLRFDGWTAEESQP
                     LLRYLYQHAARPEFTCRLQWRNGSLALWDNRSTWHYA"
BASE COUNT          352 a          662 c          669 g          400 t
ORIGIN      
        1 gccctccatg cattgaatgc cttgtccgag gcggagaatc attttcgcgg ggcgctgcgc
       61 cttgaccccg atcatgccaa cgccatgctg aaccttggcg tcatccggca gtcgctcggc
      121 catctggagg aggccgaaac actgtaccgt cgagcccggg cactgggtgc cgatgaaccg
      181 cgggtttgca acaatcttgc cctcgccctc gccgaactgg gccatttgga cgccgccgaa
      241 acggtctgcc gcgatgcgtt aatcgccaat cccaattacg ccgaggcagc cgtcaacctc
      301 gggatgatct tgctgatgca attcagactg gacgagggct ggcggtggta cgaagcccgc
      361 tggcgcgtcc cgccattgct ttcgatggcc caattgccgg tggagacacg atggaccggc
      421 gcggaaccgg ttgacggcaa aaccatcctg cttctgggcg agcaaggctt tggcgatgtg
      481 ctacaattct gccgttacgc gccaatggtc gcaggccttg gcgcgcgcgt tatccttgcg
      541 gtgccggaga cgctccgccg tctggtgcgc tcgctgccgc gggtcgccca ggtggtgtcg
      601 caggacgacg cgctgccggc attcgacctg cattgcccgc tgatgagcct gcccatggcg
      661 ttcgggacaa ccgcggaaaa cattccctgt cgggttccct atctggcagc cgatccggat
      721 gccgttgcat cctgggattc gatcatcccg ccctccggcg ttcaggtcag cggcaccgcg
      781 ggcctgagga tcgggttggt gtgggccggt gcgagccgtc cgcaacagcc gcacgccgct
      841 gcaattgacc ggcggcgatc gatgaaactg tcgcagatgg caccactcgg agcccggtcg
      901 gggaacgtgt tcgtgtcctt gcagcttggc cctccggcga gccagatcga gaccgcgcca
      961 tttccgctga tcgatgtcgc cgatcgcctg aacgattttg ccgacacggc ggctttggtt
     1021 gccaccctgg acctgatcat caccgtcgat acctctgcgg cccatctggc cggcgcactg
     1081 ggaaagccgg tctggttgct gagccgccat gacgcctgct ggcgttgggg tcgagaccgg
     1141 gatgacagtc cctggtatcc gaccatgcgc ctgttccggc agacgacgcc cggagattgg
     1201 gccggcgtga tcgagcgtgt tgccgcctca ctacccggct ttcaggtgat cggctaactg
     1261 gcccctggca aatcctggcg tctgatggca ccgtcttcgc gataccgagg gaggcggcaa
     1321 tgttcagcaa tcacctggaa attcgtccta tgtccggcac cgctggtgcc gaaatcggcg
     1381 gggtcgacct tagcggcgct atgtccgacg ccacggtcga ggcaatccgc ggtgtattgg
     1441 cggactacgg tgtcgtggtg tttcgcgacc agacgctgac accggagcaa catatctcgg
     1501 tggcccggca tttcgggaaa atcaacatca accgcttctt tgcccatgcc gatggttatc
     1561 cggagatcgc tctggtgtcg aaagaacctg accagaccgc gaatatcggc ggcggctggc
     1621 acaccgatca cagctacgat gaacggccgg ctctgggctc gatgctatac gcacgcgagg
     1681 tgccgccacg cggcggcgat accatgttcg ccagcatgta cgcggcctat gacgcgctgt
     1741 cggacggact gaaacaaact ctgtccgggt tacgcgcggt gcactccagc cggcacgtgt
     1801 tcggtgtgga gcggccggcc atgcgaggcc gcatcggcaa tcctgaactg gcgacgcagg
     1861 atgcgatcca tccggtggtc atcacgcacc cggaaagcca gcggcgggcg ctttatgtca
     1921 acccggggtt cacgctgcgc ttcgacggct ggacggcgga ggaatcgcaa ccgctgctgc
     1981 gctatttgta tcagcacgcg gcgcggccgg agttcacctg ccggttgcaa tggcggaacg
     2041 gttcgctggc gctctgggac aaccgctcga cctggcatta cgc
//
LOCUS       DATAVD010001892         2697 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2602550, whole genome shotgun sequence.
ACCESSION   DATAVD010001892 DATAVD010000000
VERSION     DATAVD010001892.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2697
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2602550"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            259..750
                     /locus_tag="VHX39_36075"
     CDS             259..750
                     /locus_tag="VHX39_36075"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEX3996619.1"
                     /translation="MPKLKRLHAGHAPAVLAFELANRAYFAASISDRGDDFFDKFTDR
                     YGALPAEQEAGICAFYVLVAEDGSVVGRFNLYDLENGTAELGYRVAQHVAGRGVATAT
                     VRELCRLAVARHGLRTLRAGTSRENVASQRVLIKAGFVLVGPADPADLGGKSGPWYQR
                     DLD"
     gene            complement(1404..2697)
                     /locus_tag="VHX39_36080"
                     /pseudo
     CDS             complement(1404..2697)
                     /locus_tag="VHX39_36080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612192.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1380 family transposase"
BASE COUNT          457 a          833 c          952 g          455 t
ORIGIN      
        1 ggacgcgggc cgggcgcgtt gacacgatta ctggccgagg gaaggcaacg aactcgcggt
       61 cgcggcaagc ctaggccaac cgggtgtggc ttctctagaa gcgctgtata accagcgagg
      121 ggctcaagtg cccgatacac gatccgtcct atcgccacaa tggtgtatcg gagcagttca
      181 tcggactgct ctgctatgtc ggccagggct ggcggaaact cagatgatct gaacgcacca
      241 tccggttagg gtcgggcggt gcccaagctg aagcggctgc atgctggcca tgccccggcg
      301 gtcctggcct tcgagctggc gaaccgcgcc tacttcgccg catcgatctc cgaccgcggc
      361 gacgacttct tcgacaagtt caccgaccgg tacggcgccc tgccggccga gcaggaggcc
      421 ggcatctgcg ccttttacgt gctcgttgcc gaggacggct cggttgtggg ccggttcaac
      481 ctgtacgacc tcgagaacgg cactgctgag ctcggttacc gggtcgcgca gcacgtcgcc
      541 ggccgcggcg tggcgaccgc gaccgtccgg gagctgtgcc ggctggcggt ggcgcggcac
      601 gggctgcgca ccctgcgggc gggcacctcc cgcgagaatg tcgcgtccca gagggtacta
      661 atcaaggccg ggtttgtcct ggttggcccg gccgatccgg ccgacctcgg tggtaagtca
      721 ggcccctggt atcagcgcga cttggactag ggccaggtgg agaggcacgt cgaactggcg
      781 ccgcaagatc gtcacgccgt ggcaaggcgg cctggggttg gccggcgcgg cagtcgggcg
      841 ccgggaacag cgtcgtcatg gtgagcagct cggcgcccgt accgacgcaa ccacccatgt
      901 tctctcatga gcgactggca ccgagcggaa cgggtggcgg cgcggcaaga cgggccgtgc
      961 ggccgggacc ggcgtcgaag gcgccgcatg cccggacgtg gcggaccggc gtagacgcgc
     1021 aagccgaccc gtgcaccgca ctgcacacac cacgcgcgag cctgaacggt cagcggttgg
     1081 cggcgccgcc cttgaacctg taaagaaagt tgttacgagg cggaggaggc gagtaagtcg
     1141 tctctcaggc atgatggccc tgcaaaaccc tccgggagac gaggtcgaca atgtctgcag
     1201 ggccggtagc cttgcttatc ttcggcgtgg tcctggtggt agcaggcatc gtcgcgatgg
     1261 ttaagcccgg atccaccgcg gttggttggt ggcggagtgg ttggttggag attggtgttt
     1321 tctgagtttg ggcgtggctg agtagccgat ctgctcggct tttccactgg atggtctccg
     1381 gtcgggcctg gcggcgggtg gggtcagggt cgggctggtg gtccggtcgc ggcggtgaac
     1441 aatttctgcc agtcggtggc ccagggccag gcggccggca ggtgtagccg tgtttgtctg
     1501 gctgagcggg tgatgcgggc agcgatgttg atcagatggg ttcggattgt tgcggtcgtg
     1561 gctttggcgt gaaagctcga ggccagagcg ccgatggcgc gggtgaggtt gaacgcgatc
     1621 gcggtcagga ccagccaggc ggagttggcc atgaaatccc cggagggcag gtgcgccagc
     1681 gagccggatt tgaggtcggc gatgacttgc tcgatgatgg cgtgccggcg gtgatcggcc
     1741 tcggcgtcca gcatcggtag cggggagtcg gtgaagaggg cgtgatagcg ccaggcagcg
     1801 aacagttcac cctgggcatc gacggtgacg tgttcggggt tggcatcgcg cactcggcgc
     1861 acgatcaacc gtgccgtcac ctgcctggct ttcggtttgg atccgaacgc ggtgaacggt
     1921 atttccgcga cctgcgcatc ggagatccac gtgtccagtt gttcatcgaa gatcgccttc
     1981 ggataacgga tgcagaccca ggcatcctcg ccgatcgtgg cgatcgcggc ggatatggcc
     2041 cggtcttgcc gggccgtgac ggagaatcgg atctgcaggc ggcgggccgt ggcgatcacc
     2101 gcgtggccgt agtaggccga atccgcgcgc aacacgatct gcccgttcac cccggccgcg
     2161 cgagtggttg ccaccgcatc agcaacgaac cgggacgcgc cgcgcgctga gttcgctgaa
     2221 cccttccgca gccgggtggc cacgatcacc ggcgccgagg acgctgtcga taccgcgccc
     2281 agcaacgcgt taagtccttt cacgccgctg tagccataac cggaaccttg tttggcgtaa
     2341 ccgtgcgtgg atcggatcgt gtcatcgata tccagatacg ccaccgggtc ggcggccccg
     2401 atgatcgggg cggtccccgg ccaacgacgc gatgaaccgg gacgcgaccg catccaactg
     2461 ccgcacatga ccgaaacgga acgcgcgcag gaacgttccc aacgtcgagg gagcccgcac
     2521 accagcaaac aaccggccca tcccgccatg acgcagcaga tccatatccg cgatcgagtc
     2581 cgccccggcg accatgccgg cgatcagcga tttcaccttc gccgcagaag catacccagg
     2641 cccaccggca acactcagat gacgcccgac aagatcgcca aggccggcac gctcggc
//
LOCUS       DATAVD010001893         6903 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_551297, whole genome shotgun sequence.
ACCESSION   DATAVD010001893 DATAVD010000000
VERSION     DATAVD010001893.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6903
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_551297"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(268..2019)
                     /locus_tag="VHX39_36085"
     CDS             complement(268..2019)
                     /locus_tag="VHX39_36085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996620.1"
                     /translation="MSTTFEHDIVTGAEAPSGVVSQLDVAHSHHLPVVAQIGARPVMP
                     DRRINRTVVLVAPEFLGAADEIERVRTTLRSARGEVRALVCVRGAGGLTLAAHLTEAG
                     LPVDVLLASDIEPGDDWPPHLSAAAVRMPSGSTPEEMNDFALALSDIVMTGPDRLADP
                     DLISKAEDQRKPVIPAGDALPALPVRHPDIAGWLHTGKRGWRILLCHASGRLEQFCLE
                     LSAFNWRGREEGGRKDSRERLLRCVSVGWKKNWPPYFASEQPHDDERNWRKLAPDNKA
                     RDDTALIVERFNSLDHSALYGAFFHRDLIWVAYFLSAFAVFDAVMGSLKYFAGGVGWP
                     SAELVTLAGIVVIIAFLRATQLQDHWTSCRLAAEQLRIVRLCLPLFVVPSVLRSADKA
                     SPGTPIYTMRALEEVKRTVRDQGIPRLRKDFSLAGAAAWLELIVADQASYHETNERRL
                     ERAEYRLHDWAAGLFLLAVLAVGTHYFHEVRWIAAVVPYLLILTAAGPAAAAALHGVR
                     TRLGIVHRIALSRDTRLELAQIQEGLAKLKLNLANLPPERAWQEIRALALLASNAMWL
                     ENTSWHNLVRREKDDIM"
     gene            complement(2090..3493)
                     /locus_tag="VHX39_36090"
     CDS             complement(2090..3493)
                     /locus_tag="VHX39_36090"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase family protein"
                     /protein_id="HEX3996621.1"
                     /translation="MSDFVTRHGLWTAEQAAEAQETIERINEIDVVRFGFADPHGVVR
                     GKTLVAAEAVRALRTGVTCTATLVLKDLSGRTAFPIFTPGGDGAGDMVMVADPATFRV
                     LPWAPHSGWILCDLYRTDGTPHPFSTRALMRRMLARLAEQQMVWRAGVEVEFHLFKYA
                     DRQPPADAIAMPGPTPEVTPLNHGYQYLTELRYDALDPLLEKLRLGLQGLGLPLRSLE
                     VENGPSQVEVTFAASTGMAPADLMLLFRNATKQIFAREGYLASFMCRPQFPHAAASGW
                     HLHHSIEDAATGRNLFPHTEGLSPMARNWLGGLLRHAQAAAAFSTPTINGYKRYRRDT
                     MAPDHAVWAYDNRAAMVRVIGAGGDPATHFENRVGEPGANPYLYMASQIACGMDGIAT
                     GADPGSPADQPYDSKAPTLPRSLLESVAALRASTSFRDAFGDEFIDYFIKLKEFEIGR
                     FLSDVTDWEQREYFDLL"
     gene            complement(3490..4809)
                     /locus_tag="VHX39_36095"
     CDS             complement(3490..4809)
                     /locus_tag="VHX39_36095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010515445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEX3996622.1"
                     /translation="MLTAAQNLLITQTGPGTECGALMRRYWQPAALAEELDTPRPVKR
                     VRLLGEDLVLFRDQAGRYGLLGRHCAHRGADLAFARCEDGGLRCPFHGWLYDVSGACL
                     EQPAEPAGSTFHSKVRQPSYPCIARSGIIWAYLGPDEPPPFPAFDCFAAPDSHVFAFK
                     GLWSCNWLQALEVGIDPAHASFLHRFFADEDPSDAAYGRQFRAATIGADIPMTRLMRE
                     VPNPQLDSEETPYGLRITTLRPVNDQVMHLRITNMVMPHGFVIPLSRDMTITQFHVPI
                     DDTHCYWYALFTSFMTPVDKATMRAQRLETHTLPDYAPLANRDNDWGYDVQEQLESTY
                     TGMGMDINVHDQWAVESQGPIADRTKEHLGYSDRIITAARRMIFHAIDDVAEGRDPPG
                     AAGADTIHGPATIDAVGPATGWERYWQEQEAARRRSAPWSAQPLATA"
     gene            complement(4919..>6903)
                     /locus_tag="VHX39_36100"
     CDS             complement(4919..>6903)
                     /locus_tag="VHX39_36100"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3996623.1"
                     /translation="TIVDGTRTPRFISDIAIKDGKIAQIGGLKGKTAKRVLDASGRIV
                     APGFVDLHTHYDAQIFWDPYCTLSGWHGVTSVALGNCGFGFAPSRAEDRDRAMLSMTR
                     NEAIPYEAMKAGMPWDWVTFPDFIESLIRTPKGVNLLTYVPLTPLYAWVMGWEAAKTR
                     RPTEAELQEMCRLIHEAMDAGACGWSAQVLGAKSIQRDYDGTPMITDLLSEHEVLTFA
                     KILSDRDEGFIELAYQETGEEGRPLAEATKQFFEKVAAVAKRPVLYQAVAPNSVHPEM
                     HRERIKWLESCTARGLPVYGQGATRRGGFEMTFEDWNLFDDTDAWREVTLGTKAEKKA
                     KMQDPAMRRRLKEEWDSGVRPTTVVPGSVGSLIIQSKNVKIDIGADSAFPKLPAPVEI
                     GGASYFLVKNRDGYRLLSRVCPHLGGTVEDDGGKFVCPNHGYEYETDHGKCLTADGLR
                     MKSYVVNVRDGRLVASVPDEKGANAAGRTVQQIADAQGKHVVDAVLDLVVEDDLATEF
                     FAETQGREAAQFTTEVLESNVIVAGVSDGGAHVKFLTAGIYPTDLLIWLVRDQKTVTL
                     EDAHYKLSYLPAHLGGFKDRGAIRENAPADIVVYDLANLEILPSEVAEDLPGGEWRRI
                     QKSKGYNWIMVNGEITFEDGVPTGAMPGRFLRNGRG"
BASE COUNT         1309 a         2136 c         2153 g         1305 t
ORIGIN      
        1 cggggcgtag ggacgtcctc tgcatggtgt tctccttttt gggtgtcatc cagctagccc
       61 gagcgggttc cgcggcagcg gtctgggcgg tttgtaacgt atccagttcg tgagggagcc
      121 acaatcgggg tgggaacgat aagaagacga cccaggttcc gggtttattc gttggcggag
      181 aggtttattt gcgcccgtcc gccatgatcc cggctgtccg atgaacccat cggcgcaccg
      241 gcagaatcag cggcagttgc ccgccggtca catgatatcg tccttttcgc gccgtaccag
      301 attgtgccag gaggtgtttt ccagccacat cgcgttggat gccagcagcg ccagagcgcg
      361 gatttcctgc caggcgcgct ccggcggcag attggccagg ttaagtttca gcttcgcaag
      421 cccctcctgg atctgggcga gctcaagcct ggtgtctcgg ctcagcgcga tgcgatggac
      481 gatgcccagt cgcgtgcgta ctccgtgcaa cgcggccgcc gccgctggac cggcggcggt
      541 caggatcagc agatatggca cgaccgcggc aatccaccgc acctcgtgga aataatgcgt
      601 acccacggcc aggactgcca acaggaacaa gccggcagcc caatcgtgca agcggtattc
      661 ggcccgctcc aaccgacgtt cgttggtttc gtgatatgag gcctgatcag cgacgatcag
      721 ttccagccac gccgccgccc ctgccagcga aaaatccttg cgcagccgag ggataccctg
      781 atcgcggaca gtccgcttca cctcctccaa cgcgcgcatc gtatatatcg gagtgccagg
      841 cgacgctttg tcggcgctgc gcagcaccga cggcacgaca aacagcggca ggcacagccg
      901 cacgatccgt aattgctcgg cggccaaccg gcaggatgtc cagtgatcct gcaattgtgt
      961 cgcgcgcaag aaggcgatga tcacgacgat ccccgccagc gtgacaagtt ccgctgaggg
     1021 ccatccaaca ccgcccgcga agtatttgag tgagcccata accgcatcga acacagcaaa
     1081 tgcagaaagg aaataagcga cccagatcag atcgcggtgg aagaacgctc cgtataaggc
     1141 actgtggtcg agcgagttga agcgttcgac gatcagagct gtatcgtccc gggccttgtt
     1201 gtccggtgcg agcttgcgcc agtttcgctc gtcgtcatgc ggctgctcgg acgcaaaata
     1261 gggaggccag tttttcttcc accccacgga gacgcatcgt aacagtcgtt cgcggctgtc
     1321 cttacgaccg ccttcttccc ggccacgcca attgaatgcg gacagttcca gacagaattg
     1381 ctcgagccgg cccgacgcgt ggcaaagcaa gatgcgccaa cccctcttcc cggtgtgcaa
     1441 ccacccggcg atatccggat ggcgcacggg caatgcgggc agcgcgtcgc ccgccgggat
     1501 cacgggcttc ctttgatcct cggccttact gatcaggtcc ggatcggcga ggcggtccgg
     1561 accggtcatg acgatgtcgc tgagcgcgag cgcaaagtca ttcatttcct ccggcgtact
     1621 gccggacggc atgcgaacgg cggccgcgct gagatgcggc ggccaatcgt ctcctggctc
     1681 aatgtcagaa gccagcagta cgtccaccgg caatcctgct tcagtcagat gggcagcgag
     1741 ggtcaggccg ccggcaccgc gaacgcagac cagcgcgcgc acctcgccac gtgcacttct
     1801 gagggtggtg cgcacccgtt cgatctcgtc agcggcgccc agaaactccg gtgccacgag
     1861 cacgactgtt cgattgatcc gacggtccgg catcaccggc cgcgcgccga tctgcgccac
     1921 gacgggcaag tgatgcgaat gcgcgacgtc cagttggctt acaacccccg atggtgcctc
     1981 ggcaccggtc acaatatcat gctcgaatgt cgtgctcatg gagaatgcgc tccattggca
     2041 ctatcgcagt ggcaggttga gcgcggcaag cagattgtcg aacggccgat caaagcaggt
     2101 caaaatactc ccgttgttcc cagtcggtga cgtcggacag gaaccggccg atctcgaact
     2161 ccttcaattt tatgaaatag tcgatgaatt cgtcgccgaa tgcgtcacgg aagctggtgc
     2221 ttgcgcgcag tgcggcgacc gactccagca aactacgcgg cagtgttggc gccttggaat
     2281 catagggctg atcggccggg gacccggggt ctgcgccggt tgcgatgccg tccattccgc
     2341 aggcaatctg ggacgccata tacaaatacg gattggcacc cggctcgccc acccggttct
     2401 cgaaatgcgt ggccggatcg ccgcccgcac caatcacccg aaccattgcc gcgcgattgt
     2461 cataagccca gacggcgtga tccggtgcca tggtatctcg ccggtagcgc ttgtagccat
     2521 tgatcgtcgg cgtactgaat gccgccgcgg cttgcgcgtg ccgcaacaat ccgccgagcc
     2581 agttacgcgc catcggcgac agaccctcgg tatgcggaaa caaattgcgg ccggtggcgg
     2641 cgtcttcgat cgaatgatgc aggtgccagc cggacgcagc ggcatgaggg aactggggcc
     2701 ggcacataaa gctcgccaga tagccttcgc gcgcgaaaat ctgtttggtt gcgttacgga
     2761 acagcagcat caggtcggcc ggcgccatgc cggtcgaggc ggcgaaggtg acctcgacct
     2821 gagacggtcc gttttcaact tccagagagc gcagcggcag gccgagacct tgaagtccca
     2881 gcctcagctt ctccagcaac gggtcgagcg cgtcgtaacg tagctcggtc aggtattggt
     2941 agccatggtt cagcggcgtg acctcgggcg tcggtcccgg catggcaatg gcgtcggccg
     3001 gcggctgtcg gtcggcgtat ttgaacagat ggaactcgac ctcgacgccg gcgcgccaga
     3061 ccatttgttg ttcggcaagg cgtgcgagca tgcggcgcat gagggcgcga gtggagaacg
     3121 ggtgcggtgt gccgtcggta cgatacagat cgcacaggat ccagccactg tggggcgccc
     3181 agggcaggac gcggaaggtg gcggggtcgg caaccatgac catgtcgccg gcgccatcgc
     3241 cgccgggggt gaagatcgga aatgcggtgc ggccggacag atccttcagc accagggtcg
     3301 cggtgcaggt gacgccggtg cgcaatgcac gtacggcctc ggcagcgacc agggtcttgc
     3361 cacggaccac gccatgcgga tcggcaaagc caaaccgcac cacatcgatt tcattaattc
     3421 tttcaatggt ttcctgggct tccgccgctt gctcggcggt ccagagtccg tgccgcgtaa
     3481 cgaaatcgct cacgcggttg ccagtggttg ggcagaccag ggagccgagc gccgccgtgc
     3541 tgcctcctgc tcttgccagt aacgttccca gccggtcgcc ggcccgacgg catcgatcgt
     3601 ggcgggacca tggattgtgt cggcgccagc ggcgccgggc ggatcgcggc cttcggcgac
     3661 atcgtcgatg gcatggaaga tcatccgccg tgcggcggtg atgatgcggt cggaataacc
     3721 gagatgttcc ttggtgcggt cggcgatggg gccttggctc tcgaccgccc attggtcgtg
     3781 cacgttgatg tccatgccca tgccggtata ggtggattca agctgctcct ggacgtcgta
     3841 gccccagtcg ttgtcgcggt tcgccagcgg ggcgtaatcg ggcagagtgt gagtttccag
     3901 gcgttgcgcc cgcatggtgg ctttgtcgac cggggtcatg aagctggtga acagtgcgta
     3961 ccagtaacaa tgcgtgtcgt cgatcggcac gtggaactgg gtaatggtca tgtcgcggct
     4021 gagcgggatc acgaagccgt gcggcatgac catgttggtg atgcgcagat gcatgacctg
     4081 gtcgttgacc gggcgcaacg tggtgatgcg caggccgtac ggggtttcct ccgaatccag
     4141 ctggggattg gggacttcgc gcatcaacct ggtcatcggg atgtcggcgc cgatggtcgc
     4201 ggcgcggaac tggcggccgt aggcggcatc ggatgggtct tcgtctgcga aaaaccggtg
     4261 caggaaactg gcgtgcgcgg ggtcgatgcc gacttccagc gcctgtagcc agttgcagga
     4321 ccacaggcct ttgaaggcga acacgtgaga gtccggtgcg gcgaagcaat cgaaagcggg
     4381 gaacggtgga ggttcgtccg gaccgagata agcccagatg atgccgctgc gtgcaatgca
     4441 tgggtaggac ggttggcgaa ctttgctgtg aaacgtggag ccggcgggct cggcgggttg
     4501 ttccaggcag gcgccggaga cgtcataaag ccaaccgtgg aacgggcaac gcagtccgcc
     4561 gtcctcgcag cgagcgaagg ccagatcggc gccgcgatgg gcacagtggc gacccaacag
     4621 cccgtagcgg ccggcctggt cacggaacag cacaagatct tcgcctagca gacggacgcg
     4681 cttcaccggg cgtggggtgt cgagttcttc ggccagggcg gccggttgcc agtaacgacg
     4741 catcaacgcg ccgcattcgg tgccagggcc ggtttgtgtg atcagcaggt tctgcgcggc
     4801 ggtcagcatt ccgaagactc cgatcgactc ggaggcatcc tatgggcggg ccggaatgaa
     4861 gcccagaggg ccataagctt gcctgcacgt tcgcgacgtg caggcaagcg aactctggtt
     4921 agccccgtcc gttccgcaag aaccttccgg gcatggcgcc cgtcggcacg ccatcctcaa
     4981 aggtgatctc accgttgacc atgatccagt tgtagccttt cgacttctgg atacggcgcc
     5041 attcgccacc gggcaggtct tcagcaactt ccgacggtaa aatctcaaga tttgcaaggt
     5101 catacaccac gatatcggcc ggtgcattct ccctgatggc accacggtcc ttgaagccgc
     5161 ccaaatgcgc cggcagataa ctcaatttgt agtgcgcatc ctccaacgtc accgtcttct
     5221 gatcgcgcac cagccagatt agcagatcgg tcggatagat cccggcggtc aggaatttta
     5281 cgtgcgcgcc accgtccgaa acacctgcga cgatgacgtt ggactccagc acctctgtgg
     5341 tgaactgcgc ggcctcgcgt ccctgggttt cggcgaagaa ttcggtggcc agatcatcct
     5401 cgaccaccag gtcgagcacc gcgtcgacga cgtgcttgcc ctgtgcgtcc gcgatttgct
     5461 gaaccgttcg tccggctgcg ttagcaccct tctcgtccgg gaccgacgcg accaggcggc
     5521 catctctgac gttcacaacg tatgacttca tccgcagccc atcggcggtg aggcacttgc
     5581 cgtgatccgt ttcgtactcg tagccgtgat tggggcagac gaacttcccg ccgtcgtcct
     5641 cgaccgtgcc gccaaggtgc ggacaaaccc gggaaagcag ccgatagcca tcacggttct
     5701 tcaccaggaa gtaagacgca ccgccaatct cgaccggagc aggcaacttc gggaaagccg
     5761 aatccgcacc aatgtcgatt ttcacgttct tcgattggat gatcaggcta cccaccgaac
     5821 cgggaaccac ggtcgttggc cgaacgccgg aatcccattc ctccttcaga cggcgtcgca
     5881 tcgccggatc ctgcatcttg gcttttttct cagccttcgt gccaagcgtc acctcccgcc
     5941 aggcatcggt gtcatcgaac aggttccagt cctcgaaggt catttcgaac ccaccgcgcc
     6001 ttgtggcacc ctggccatag accggcagcc cgcgcgccgt gcagctttcg agccacttga
     6061 tccgttcgcg gtgcatttca ggatgcaccg agttcggcgc aaccgcctga tacaaaaccg
     6121 gccgtttcgc gaccgcggcg actttctcaa agaactgctt tgtcgcctcc gccagaggcc
     6181 gtccttcttc accggtctcc tgatacgcca gttcgataaa accctcgtca cgatcggata
     6241 atattttcgc gaaggtcagg acctcatgtt ccgacagcaa atcggtaatc atcggggttc
     6301 cgtcataatc ccgttgaatc gatttcgccc ccagcacctg ggccgaccag ccgcaggcgc
     6361 cggcatccat cgcctcgtgg atcagacggc acatttcctg cagttccgcc tcggtcgggc
     6421 ggcgcgtctt ggcggcttcc cagcccatga cccaggcata aagcggggtt aacggcacgt
     6481 aggtcagcaa attgacgcct ttgggtgtgc ggatcaggct ttcgatgaaa tccgggaacg
     6541 ttacccagtc ccacggcata ccggctttca tggcctcgta aggaatcgct tcgttacggg
     6601 tcatgctcag catcgcgcga tcgcggtctt ccgcccggga cggagcgaac ccgaacccgc
     6661 aattgcccag tgcgacggag gtcacgccgt gccagccgga aagggtgcaa tacggatccc
     6721 agaagatctg cgcgtcatag tgcgtgtgca gatcgacaaa accaggtgcg acgatccgcc
     6781 ccgaggcgtc cagcacgcgt ttggcagtct tgcctttcaa accgccgatt tgagcgattt
     6841 taccgtcctt gatcgcaatg tcgctgatga accgaggcgt ccgcgtgccg tcgacgatcg
     6901 tcc
//
LOCUS       DATAVD010001894         2191 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_363930, whole genome shotgun sequence.
ACCESSION   DATAVD010001894 DATAVD010000000
VERSION     DATAVD010001894.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2191
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_363930"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..397)
                     /locus_tag="VHX39_36105"
     CDS             complement(<1..397)
                     /locus_tag="VHX39_36105"
                     /inference="COORDINATES: protein motif:HMM:NF014698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3996624.1"
                     /translation="MTSTPQLRPLGVNTLGTEALGIDLSQPLDEPTFAWIANAFAENP
                     VLVFRDQDLDANALAGFGRRFGTPRKHALMKYRHAEHPEVSWLTNVEDDGKIDWYGVK
                     RATDWHTDSTFEDNLPLLAILHAKQVPSDK"
     gene            514..1899
                     /locus_tag="VHX39_36110"
     CDS             514..1899
                     /locus_tag="VHX39_36110"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEX3996625.1"
                     /translation="MQSGGIRRGLWLAAAVAVVALLGAGLVYVRRTRPISVATGTIAQ
                     TLCTEVFVSHLSAEDVYRETLAPALGSGLVANHVHWSVDHQRQTVIADWFGRFTSTAV
                     YRGVAGCLLWRDHPASPPAPVLTPFAAAWQPAIAGPQIVAPSDPALIRALDNEFANPE
                     RHIKAIVVVKNGQLVAERYAPGVGIDTPLLGYSVGRLVINALAGILVGQGRLHLDTPA
                     PITAWAADHDPRHDITLDNLLRMTSGLAIPESDSGLDAVSRMLFTEPDMAGFAAQSPV
                     EHKAGEVYAYSSGNTLLVGRLIADAVGGTEADVLNFARTALFGPLGMHSVVIETDAIG
                     TPVGSTFILASARDWACLGLLYLNDGVVAGHRVLPESWVGYTRRPTLGTDYGAGVFTN
                     AGANGPAKGRIRAGMAEDAFYASGRLGQRIYILPSQQLVVVRLGVTQSPDFDIVGDLR
                     LLRELNVALAR"
     gene            1959..>2191
                     /locus_tag="VHX39_36115"
     CDS             1959..>2191
                     /locus_tag="VHX39_36115"
                     /inference="COORDINATES: protein motif:HMM:NF012663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3996626.1"
                     /translation="MTLDLVIRNGTIVDGSGMGRYRADVGVAKGQIVEIGRIRAPAQR
                     TIDADGLIVAPGFIDGHTHMDAQVNWDRQGTCS"
BASE COUNT          375 a          645 c          719 g          452 t
ORIGIN      
        1 ccttgtccga cggcacctgc ttcgcatgca gaatggcgag cagcggcagg ttgtcctcga
       61 acgttgaatc ggtgtgccag tcggtggcgc gcttaacgcc gtaccagtcg atcttgccat
      121 cgtcttcaac gttggtgagc caggaaactt ccggatgctc ggcatggcgg tacttcatca
      181 gggcatgctt gcgcggcgtg ccgaagcggc ggccgaaccc ggcgagcgca ttggcgtcca
      241 ggtcctgatc acggaacacc agcacggggt tttccgcgaa tgcgttggcg atccaggcga
      301 aggtgggttc atcgagcggt tgtgacagat cgatgccgag tgcctcggtg ccaagggtat
      361 tcacgcccag aggacggagt tgcggtgtgc ttgtcatggc tttacctccc gattgccgga
      421 gtatgcgacc gaccgggctc tggcggcaat cggtggctgc aggtgagtcc ggacgggttc
      481 gctggcaccg tcgtaccccc tggagcaaat cgcatgcaat ctggaggcat caggcgcggg
      541 ctatggcttg ctgccgcagt cgctgtggtc gctttgcttg gcgcgggact ggtttatgtg
      601 cgtcgtacgc ggccaatcag cgtcgccacc ggaacgatcg cgcaaacact ttgcaccgag
      661 gttttcgtct cgcatctaag cgccgaggat gtttatcgcg aaaccctcgc tcctgctttg
      721 ggttccggcc tcgttgcgaa ccacgtgcat tggtcggtgg accaccagcg tcagacggtc
      781 attgccgact ggtttgggcg gttcacgagc actgcggttt accgaggtgt ggcgggatgc
      841 ttgctctggc gagaccatcc tgcatcaccg cccgccccgg tgctgacacc tttcgccgcg
      901 gcgtggcagc ccgcgatcgc gggtccgcaa atcgtcgcac catccgatcc ggcgctgatc
      961 cgggctctcg ataacgaatt cgctaatccg gaacggcaca tcaaagcgat tgttgtggtg
     1021 aagaacggcc agctggtggc cgaacgttac gcgcccggcg ttggcatcga tacgcccttg
     1081 ctcggttatt ccgtcggcag gttggtgatc aacgcattgg ccggcattct cgtgggccag
     1141 ggtcgcctgc atctggacac accggcaccg atcaccgcat gggcggcaga ccacgatccc
     1201 cgccacgaca ttaccttgga caatttgttg cggatgacca gcggtctggc gattccggag
     1261 agcgatagcg gtctcgatgc ggtgtcgcgg atgctgttca cggaacccga tatggccggc
     1321 tttgcagccc agtcgccggt tgagcacaaa gcgggggagg tttatgcgta tagcagcggt
     1381 aatacgctgc tggtcgggcg tctgattgcc gatgccgtgg gcggaaccga agcggatgtg
     1441 ttgaatttcg cacggacggc tttattcgga ccactcggca tgcacagcgt tgtgatcgag
     1501 accgacgcca tcggcacacc ggtcggttca accttcattc ttgcgagcgc ccgcgactgg
     1561 gcttgcctcg ggttgctgta tctcaatgac ggcgttgtgg cgggacatcg cgtactgccc
     1621 gaaagttggg tcggctatac acggcgcccc acactcggca ctgactacgg cgccggcgtg
     1681 ttcaccaacg cgggtgccaa tggtccggca aagggacgga tccgtgccgg tatggccgag
     1741 gatgcgttct acgcctcagg ccggctcggg caacgcatct acattctgcc atcgcaacag
     1801 cttgtcgtgg tgcggttggg cgtgacccag tcgccggatt tcgatatcgt cggcgatctg
     1861 cgattgctcc gggaactcaa tgttgctttg gcgcggtgac ggaccgcggc tggtctggta
     1921 gcgttcctga cagaccagaa acggcaggag gaatcgccat gacgctcgac ctcgtcattc
     1981 ggaacggcac catcgtggac gggtccggca tggggcggta ccgcgccgat gttggcgtcg
     2041 ccaagggtca gattgtcgag atcggccgca ttcgtgcacc agcgcaacga acgatcgatg
     2101 ccgatggcct gatcgtggca cccggcttca tcgatggtca cacccacatg gacgcgcagg
     2161 tgaactggga ccgccaaggg acgtgttcct g
//
LOCUS       DATAVD010001895         1619 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2603482, whole genome shotgun sequence.
ACCESSION   DATAVD010001895 DATAVD010000000
VERSION     DATAVD010001895.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2603482"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1292)
                     /gene="metG"
                     /locus_tag="VHX39_36120"
     CDS             complement(<1..1292)
                     /gene="metG"
                     /locus_tag="VHX39_36120"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007400377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEX3996627.1"
                     /translation="MKPEFYITTPIYYVNGAPHIGHAYTSIAADVMARFKRLDGYDVF
                     FLTGTDEHGQKVEAAAREAGVDPQTYVDGVSADFQDMTRAMGVSNDDWIRTTEARHKA
                     SSMELWRRIDASGDIYLDHYEGWYAVRDEAFYDEDELTTQADGTKVAPSGAPVQWVRE
                     PNYFFRLSAWRDRLLKLYEDNPEFIAPTSRRNEVMSFVRGGLRDLPISRTTFTWGIPV
                     PDAPGHVMYVWLDALQNYVTGCGFPDPDAPRWRFWPADVHFVGKDIIRFHAVYWPAFL
                     MAAGLPVPKRVTSNGWWLADGEKMSKSLGNVLEPRALVSIFGLDQIRYFLMREKPFGA
                     DGSISHQAIISRINVELANDLGNLAQRTLSLVARNLGGVLPGWDTCTSSDEALLTAAN
                     ALPALVRAAIERQTFHEALEEIWKVIRLANAYIDHQAP"
     gene            complement(1289..>1619)
                     /locus_tag="VHX39_36125"
     CDS             complement(1289..>1619)
                     /locus_tag="VHX39_36125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996628.1"
                     /translation="AAMVDNLLAALPDVPLSRGHAVADTLGRSDTGFHLFTDQLIAGI
                     AALVRDTVRGRADPEQQRLAALLPLDAWGELWQGLLRLQDETERFALDKRQALVSCVG
                     MLTGRMS"
BASE COUNT          301 a          516 c          500 g          302 t
ORIGIN      
        1 cagggcgcct ggtggtcgat gtaggcgttg gccaggcgga tgactttcca gatttcttcc
       61 agcgcctcgt ggaaggtctg acgctcgatg gcggcgcgta ccagagccgg caaggcattg
      121 gcggcggtca gcaatgcctc gtccgacgaa gtgcaggtgt cccatcccgg cagcacgccg
      181 cccaggttac gtgccaccag cgacaacgtg cgctgcgcga ggttgcccag atcgttggcc
      241 agctcgacgt tgatccggct gatgatcgct tggtggctga tcgatccgtc cgccccgaac
      301 ggcttttccc gcatcaggaa atatcggatt tggtcgaggc cgaagatgga gaccagcgcc
      361 cgtggttcca gcacgttgcc aagcgatttg ctcattttct cgccgtcggc gagccaccag
      421 ccattcgagg tcacccgttt tggcaccggc aaaccggccg ccatcaggaa cgccggccaa
      481 tagacggcgt ggaaacgaat gatgtccttg ccgacgaagt gcacatcggc gggccagaaa
      541 cgccagcgcg gtgcatccgg atccgggaag ccgcagccgg tgacgtagtt ctgcagcgcg
      601 tccagccaga catacatcac gtggccgggc gcgtccggca ccgggatgcc ccaggtaaac
      661 gtggtccggc tgatcggcag atcgcgcaga ccgccccgaa cgaaactcat gacttcgttg
      721 cggcgtgagg tcggcgcgat gaactctgga ttgtcttcgt acaatttcag cagccggtcc
      781 cgccaggcgg acagacgaaa gaaatagttg ggctcgcgta cccactgcac gggcgcgccg
      841 ctcggtgcga ccttggtacc gtcggcttgt gtcgtcagtt cgtcctcatc gtagaaggcc
      901 tcatcgcgaa ccgcgtacca gccttcgtaa tgatcgaggt aaatatcgcc ggacgcgtct
      961 atcctgcgcc acaattccat gcttgaggct ttgtgccggg cctcggtggt gcggatccag
     1021 tcatcattgg acacgcccat cgcccgcgtc atgtcctgaa aatcggccga gacgccgtcg
     1081 acgtaggtct gcggatcgac gcctgcctcg cgtgccgccg cttcaacctt ctgaccgtgc
     1141 tcatccgtgc cggtcaggaa gaacacgtca tacccatcaa gccgcttgaa ccgagccatg
     1201 acatcggccg cgatcgaggt gtaggcatgc ccgatatgcg gcgcgccatt cacgtaatag
     1261 atcggggttg tgatgtagaa ctctggtttc atgacattct tccggtgagc atcccgacgc
     1321 acgagaccaa cgcctgacgt ttgtccagcg cgaaccgttc ggtttcatcc tgcaggcgaa
     1381 gtagcccctg ccacagctcc ccccacgcat caagcggcag cagagcagcc aggcgctgct
     1441 gttccgggtc ggctcgcccg cgcacagtat cgcgcaccag ggcggcaatt ccggcaatca
     1501 gctggtcggt gaacagatgg aacccggtat cgctgcgccc cagagtgtcg gcgaccgcgt
     1561 ggccccggct gagtggaacg tcgggcagcg cggccagcag gttgtcaacc attgctgcc
//
LOCUS       DATAVD010001896         2824 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1852666, whole genome shotgun sequence.
ACCESSION   DATAVD010001896 DATAVD010000000
VERSION     DATAVD010001896.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2824
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1852666"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(173..1897)
                     /locus_tag="VHX39_36130"
     CDS             complement(173..1897)
                     /locus_tag="VHX39_36130"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat-containing protein"
                     /protein_id="HEX3996629.1"
                     /translation="MSAATQSVTAAAEGTQTEADWLVRIGQARRQGNYLLVYDLAQRA
                     LQAWPDAIDFEHQAILALARAGATNNARTRYDRLVASGRLDAITDPRLAEDFAALDGR
                     LWKDLAQRSRPDDALRYRLLSANAYAAASRRFSRYYTAINAASMFLAAGNGADATGYA
                     SAALELAQKAPDSDYWALATRAEALLILGEPVGAAAALRAAWVVSGQNFDEQATTRRQ
                     LAWVADLVGAPAETLQALAKPRVVTWMSRPDGVGPDDGAKLGSDQSVIAFGPVLSGAD
                     IITARALLDAGIEVNLVLPCDPELFATSPIRAEVTKFDEIFQPTIDDAASITLVTHEG
                     GPFEPAARQLCREQASGLARLRAEHLAVTPELLAFSADGIRFSALPADFAVADPATGV
                     PADLIRQPHAILFGDVRGFSKLNEAQQLLFLDHIIGGFADVLDAGNYAEYAETAGDGL
                     FVIVSDVAKAAECCFALRDVLLPEKVAAAGLPDHLALRLSAHVGPLHRRYDRVIRRDK
                     FCGMEVIRTARIEPVTPAGEIFVTEQFAATLACTAGDRYLCEYAGVLPMAKNFGECRM
                     YSLRPATP"
     gene            complement(1899..2798)
                     /locus_tag="VHX39_36135"
     CDS             complement(1899..2798)
                     /locus_tag="VHX39_36135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996630.1"
                     /translation="MVLNAPNDSRLVCNVTPKVFGTNQQLTNYRIILADEPCATKPFN
                     EFFAFLNIVNYVKRLYPVSVQLPSKPVGPPFNLAMNSNLRAVTAIDPAKYKLTRLPSG
                     QYQLMTAPRGSMVVLCEADGNTSHVVTVLSDSDDAGVRVREDACKTRGSSGDDSESST
                     AKMVTIGVTPGTFVLELRSTLEVIRYVGQVLAFQEAATATNPTWPERCITLKFINYDP
                     SDQTCNGAVLIRLLHSAPAVIPSNVSVIYEGERVSLAPPQPCPDPEQCDHSQETMSII
                     SLLLNRNKSAKDLTSTPAVEVVP"
BASE COUNT          526 a          876 c          891 g          531 t
ORIGIN      
        1 cctatgagcc ggcgacgcgt gcgatgctgg tggctggcgc acacgttatc ctgtttggca
       61 ccgaaggcga cgggggtgcg atcacggcga cccggatttc tgtgggcaag gatggcatgg
      121 ttccgccgat gtagggcagg gaggccgctg gtactcgcaa tggagtggtg ggctacggcg
      181 tggcgggccg cagcgaatac atccggcact cgccgaaatt cttggccatc ggcagcaccc
      241 cggcatattc gcacaaataa cgatcgcccg ccgtgcacgc caacgtcgct gcaaattgct
      301 cggtcacaaa aatctcgccg gccggcgtga caggctcgat gcgggccgtg cgaatgactt
      361 ccatgccgca gaatttatcg cgccggatca cgcgatcgta gcgtctgtgc aaggggccga
      421 catgagcact caggcgcagc gcgagatggt ccggcaggcc tgccgctgcg accttctccg
      481 gcagcagaac atcgcgcaat gcgaaacagc attccgcggc cttggcgacg tccgagacaa
      541 tgacaaacag cccatcgccg gcggtttccg catattcggc ataattgccc gcgtccagca
      601 cgtcggcgaa accgccgata atgtggtcca ggaacagcaa ttgctgcgcc tcgttgagct
      661 tgctgaatcc gcggacatcg ccgaacagga ttgcgtgcgg ctgcctgatc agatctgccg
      721 gcacgccggt cgccggatcg gcaacggcaa aatcagccgg cagcgcgctg aaacggatgc
      781 catctgcact gaatgcgagc agctcgggtg tgaccgcaag atgctcggcg cgcagccgcg
      841 ccagaccgct cgcctgctct cggcacagtt gacgagcggc tggttcgaat ggcccaccct
      901 cgtgagtaac cagtgttatg ctggcggcat catcgatcgt cggctgaaag atctcgtcga
      961 atttggtgac ttccgcacgg atcggcgacg tggcgaaaag ttcgggatcg cagggcagaa
     1021 cgaggttcac ctcgatgccg gcatccaaca acgcccgtgc cgtgatgatg tcggcacccg
     1081 acagcaccgg accgaatgcg atgacgctct gatcagagcc gagcttcgct ccgtcatccg
     1141 ggcccacacc gtcgggacgc gacatccagg tcaccacgcg aggcttcgcc agcgcctgca
     1201 acgtctctgc cggcgcgccc acgaggtctg cgacccatgc cagctgccgt cgtgtggtgg
     1261 cctgctcgtc gaaattttgc ccactgacaa cccatgcggc tcgcaaggcg gcggccgcgc
     1321 cgacgggttc gccaaggatc agcagcgcct cagcccgggt tgccaaagcc caatagtcgc
     1381 tgtccggcgc tttctgcgcg agctcgagag cagcgcttgc gtatccggtc gcatccgcgc
     1441 cattgcccgc ggcaaggaac atgctggctg cgttgatcgc cgtgtagtag cggctgaatc
     1501 ggcgcgaggc ggcggcatag gcgttggccg acagcaaccg gtaacgcagc gcatcgtccg
     1561 gccggctccg ctgcgccaga tctttccaaa gccgcccgtc cagtgcggcg aaatcctccg
     1621 ccagacgagg gtcggtgatc gcatccaatc tgccgctcgc gaccagccgg tcgtaacgcg
     1681 tgcgcgcatt gttggttgcc ccggcgcgtg cgagcgccag aattgcctga tgctcgaagt
     1741 cgatcgcatc gggccaggcc tgcagcgcac gttgggcgag atcgtaaaca agcaagtaat
     1801 tgccttgccg gcgcgcctga ccaatccgga ccagccagtc tgcctcggtt tgcgtccctt
     1861 cggcggcggc tgtcacggat tgtgtggccg cgctcatctc agggcaccac ctcaacggct
     1921 ggggtcgagg tcaggtcttt cgccgatttg ttccggttga gcaagagcga gatgatcgac
     1981 atcgtttcct gcgaatggtc gcattgctcc gggtccgggc agggctgcgg gggcgcgagc
     2041 gacacccgtt caccctcata tatcacgctg acgttggatg gaataaccgc cggtgcacta
     2101 tgcagtagac gaatgagcac ggcgccgttg cacgtctgat cggaaggatc gtagttgata
     2161 aacttcagcg tgatacagcg ctccggccag gtcgggttgg ttgccgtcgc ggcctcctgg
     2221 aaggccagga cctgcccgac atagcggatg acttccaggg tcgatcgcag ttcgagaaca
     2281 aacgtccccg gcgtgacccc gatcgtgacc atcttcgccg tcgaggactc gctatcgtcg
     2341 cccgaacttc cacgggtttt gcaagcgtcc tcacgtaccc gcactcccgc atcgtccgag
     2401 tcggagagta cggtcacaac gtggctggta ttaccgtcgg cctcgcacag cacgaccatc
     2461 gagccgcgtg gcgcggtcat cagttgatat tgacccgatg gcagccgtgt cagtttgtac
     2521 ttcgcgggat cgatggcggt gaccgctctg agattgctgt tcatcgccag gttgaacggc
     2581 ggccctaccg gtttggacgg cagctgcacc gagaccggat aaagtcgttt gacatagtta
     2641 acaatattca ggaacgcgaa gaattcgttg aatggtttgg tggcacaggg ttcgtcggcc
     2701 agtatgatcc gatagttggt cagctgctgg ttggttccga acaccttcgg ggtcacgttg
     2761 cagaccagtc ttgagtcgtt tggcgcattc agcaccatct cggaactgcc ggcaggccgg
     2821 atac
//
LOCUS       DATAVD010001897         2163 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2042062, whole genome shotgun sequence.
ACCESSION   DATAVD010001897 DATAVD010000000
VERSION     DATAVD010001897.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2042062"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="VHX39_36140"
     CDS             complement(<1..494)
                     /locus_tag="VHX39_36140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008852960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3996631.1"
                     /translation="MEADYVIVGAGSAGCVLANRLTEDANTRVLLIEAGGRDWHPMIH
                     IPAGYMKLLDHPTLTWGYKADAASGLNGREIPYPRGRVLGGSSSINGMIYIRGQPEDF
                     DHWAQLGNRGWSWDDVLPFFRKAENWEGDADTVHAKGGPLFTSPTRDQPPLCQAAVEA
                     GEQMG"
     gene            629..1174
                     /locus_tag="VHX39_36145"
     CDS             629..1174
                     /locus_tag="VHX39_36145"
                     /inference="COORDINATES: protein motif:HMM:NF014494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavoprotein"
                     /protein_id="HEX3996632.1"
                     /translation="MALHGTAERECFDVAYLVLSGTTTAARCPELLRGLIGLGFSTVI
                     AIPTPNAARVIASRELADIAGVTVVESYFDAAIRPRPPRGVVLFAPCSFNSLNKLAHG
                     IADSLALSVVAEAIGRATPVIVAPSLNQPLLDHPMAQASLKTLPTWNVIVVPPADEGE
                     GPRLAPSERLLEAVRPFVRSS"
     gene            complement(1266..>2163)
                     /locus_tag="VHX39_36150"
     CDS             complement(1266..>2163)
                     /locus_tag="VHX39_36150"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEX3996633.1"
                     /translation="VEARDLDHVVADFFGARSPLQEINPRAPAAPKARVLVVEDNRIN
                     QALLVDQLNRAGFSTFAASDGMEAVEAVRRGGFDAILMDVQMPEIDGIEATRRIRTGE
                     RRYRIPVIGLTAHTGSIVRKRCLDAGMDLVLHKPVDFSCLPLRLREVIAAAHVATNGD
                     TNGETARTIESGLEIDDEYLEILLAEVGVKRARVCVTAFLADTTVHLSAMVRQMNGHE
                     WEELGRLAHSLAGIAGTLGAINLADGLLMLEDAARLEGQVLVDTALNDVRSTWERTRV
                     MMLPRFEALAASRTRAAPNRAA"
BASE COUNT          389 a          693 c          657 g          424 t
ORIGIN      
        1 cccatctgct ctcccgcctc gaccgcggcc tggcacaacg gcggctggtc tcgggtcgga
       61 gacgtaaaca gcgggccgcc cttggcgtga acagtgtcgg cgtcgccctc ccagttctcg
      121 gccttgcgga agaacggcag gacgtcatcc cacgaccaac cgcgattgcc gagttgcgcc
      181 caatgatcaa aatcctcagg ttggccgcgg atatagatca tgccgttgat cgagcttgag
      241 ccgcccagta ctcggccgcg cggatacggg atttcgcgtc cgttgaggcc tgacgcagcg
      301 tcggccttgt aaccccaggt caacgtcgga tggtccaaca gcttcatgta accggcggga
      361 atgtggatca tcgggtgcca gtcacggccg ccggcttcga tcagtaagac ccgggtgttg
      421 gcgtcctcgg tcagccgatt ggccagaacg catccggccg atcccgcacc gacgatcacg
      481 taatcggctt ccattggcgt tttccccttg atccactgcc tgatggcgtt ggcatctaac
      541 ggcggcggcg caacggtgcc aagctgcccc gggacgccgc ggtgggcgag gcaagatccg
      601 ttcatcgcaa atggtaagga caatcaaaat ggctttgcac ggcacggcag aacgagaatg
      661 ctttgacgtc gcctatctcg tgctcagcgg cacaacaacc gcggcgcgct gccccgaact
      721 gcttcgcgga ctgattgggc tcggcttttc gaccgtcatt gccattccga cgccgaatgc
      781 cgcacgcgtg attgcgtcgc gcgaactggc ggatattgca ggggtgacgg tcgtcgagtc
      841 atatttcgat gcggcgattc gtcctcgccc gcccagaggc gtggtgctgt tcgcgccatg
      901 cagcttcaac tctctgaaca aacttgcgca tgggatcgcg gatagtctcg ccttgtcggt
      961 ggtcgcggag gcgatcgggc gggcgacccc ggtgatcgtg gcaccatcgc tcaatcagcc
     1021 gctgctcgat cacccgatgg cgcaggcgtc attgaagacg ttacccacat ggaacgtgat
     1081 cgttgtgccg ccagccgacg agggcgaagg ccccaggctt gcgccatccg aacggttgct
     1141 ggaagcggtt cggccgtttg tccgctcatc gtgacaaaac tggcatcatg catgatcggg
     1201 tttggttggc cgctaatccg gcccggcgcg aaaaggttgc gcgggggcaa tcttcacagt
     1261 tgcgcttaag ctgcccggtt cggtgccgcg cgggtgcgag acgcggcaag cgcctcaaat
     1321 cttggcagca tcatcacgcg tgtccgctcc caggttgagc gcacatcgtt cagcgcggta
     1381 tcgacgagca cctgcccctc gagccttgcc gcgtcttcca gcatgagcaa cccgtccgcc
     1441 agattgatcg ctccgagtgt cccggcgata ccggccaggc tgtgtgcgag ccggccaagc
     1501 tcttcccatt cgtggccgtt catctgccgt accattgctg ataaatgcac tgtggtatcg
     1561 gccagaaaag ctgtcacgca gacgcgcgcg cgtttgacac ccacttcggc cagcagaatc
     1621 tccaggtact catcgtcaat ttccagcccg ctttcgattg tcctcgctgt ctcgccattg
     1681 gtgtcgccat tggtagcgac gtgcgcagcg gcaataacct cgcgcagccg caatggcaga
     1741 cacgaaaaat cgaccggctt atgcagcacc agatccattc ccgcatcgag gcagcgcttc
     1801 cgcacgatag agccggtatg ggctgtcagt ccgatgactg gaatgcggta gcgtcgttca
     1861 ccggttcgaa tccgccgtgt cgcttcgata ccgtcgattt ccggcatctg cacgtccatc
     1921 aggatcgcat cgaagccgcc tcgccgcacc gcctcgaccg cctccatgcc gtcacttgcg
     1981 gcaaacgtgg aaaacccggc ccgattgagc tggtcgacca gcaaagcctg gttgatgcgg
     2041 ttgtcctcga cgaccagcac gcgcgccttg ggggctgcgg gagcgcgggg attgatctcc
     2101 tgcagcggcg agcgggcgcc aaaaaagtcg gctacgacgt ggtccagatc gcgcgcttcg
     2161 acc
//
LOCUS       DATAVD010001898         1544 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3718990, whole genome shotgun sequence.
ACCESSION   DATAVD010001898 DATAVD010000000
VERSION     DATAVD010001898.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3718990"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="VHX39_36155"
     CDS             <1..200
                     /locus_tag="VHX39_36155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014241219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEX3996634.1"
                     /translation="AHEISETLDVALAHAARDAEASGVADPVVLLSPACASFDQFRNF
                     EIRGAVFRDLVNALPGVKPVV"
     gene            436..>1544
                     /gene="ftsW"
                     /locus_tag="VHX39_36160"
     CDS             436..>1544
                     /gene="ftsW"
                     /locus_tag="VHX39_36160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009540732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HEX3996635.1"
                     /translation="MLSREERTPLSEWWWTVDRLQLAAIIALMLAGIILSLAASPPVA
                     VRIGLDPFHFFNRQVMFLAPAFMVMIAVSFLSPKQIRRSALIVFAVSIVLIVMTLLFG
                     PEVKGSRRWITLLGVNIQASESAKPAFVVVAAWLFSESTKRSEMPATTMALVLLLTLI
                     SLLVMEPDFGQTMLISMVWGVLFFIAGMRMVWVFGLAGIASAGLFVAYLLVPHVAARI
                     QRFMNPASGDTFQIDTALEAFYNGGWFGLGPGEGIAKRSLPDSHTDFVFAVAAEEFGI
                     VLCLILLSLFAFVVIRALSRAYATEDMFSRFAASGLAVLFGIQAAINMSVNLQLIPAK
                     GMTLPFISYGGSSMVSLAYGVGMMLALTRQRPRTE"
BASE COUNT          241 a          466 c          485 g          352 t
ORIGIN      
        1 tagcccacga gatcagcgag acacttgatg tcgcgctcgc gcatgcggcg cgcgatgcgg
       61 aagcgtctgg tgtcgccgat cccgtggtgc tgctgtcgcc ggcctgcgcc tcgttcgacc
      121 agttccgcaa tttcgaaatc cggggcgcag tcttccgcga cctcgtcaat gcactgccgg
      181 gcgtcaagcc ggtggtgtga tcagcctcgt atgaaggagg ccttctactc cgcgaaagcg
      241 gagtatccag gacgccgcgg ctgaagtggt attctcgtga gagtggtcgc tactggatca
      301 cctgcctgcg cgggtgatga ccgtgggtgg cgatagcggc cctatgcctc tatccacaaa
      361 cttaacgatc tcattaaccg cttcgaaacc atcatcggcg accaatggca gaagctttgc
      421 catctgggaa cgccgatgct ctcccgtgaa gaacgcacac ccttaagcga atggtggtgg
      481 accgtcgacc gcctgcagtt ggctgcgatc atcgcgctga tgctggccgg catcatcctg
      541 tcgctggcgg cgagcccacc ggttgcggtg cgcatcgggc tcgatccgtt ccacttcttc
      601 aatcgccaag tgatgttcct ggcgcccgcc ttcatggtga tgatcgcagt ctcgttcctg
      661 tcgccgaagc agatccgccg cagcgcgttg atcgtgttcg cggtcagcat cgtcttgatc
      721 gtgatgaccc tcttgttcgg gccggaggta aagggttcgc gacgctggat cacgctgctc
      781 ggcgtcaaca ttcaggcatc ggaatccgcc aagcccgctt tcgtcgtggt ggcggcatgg
      841 ctgttttccg aatcgaccaa gcggtcggaa atgccggcaa cgaccatggc gctggtgctg
      901 ctgttgacgc tgatctcgct tctggtgatg gaaccggatt tcggccagac catgctgatc
      961 tcgatggtct ggggcgtgct gttcttcatc gcaggcatgc ggatggtctg ggtattcggc
     1021 ctggccggca ttgcgagcgc cggacttttc gtggcctatc tgctggtgcc gcatgtcgcg
     1081 gcccgtatcc agcgcttcat gaatcccgcc tccggcgaca cgttccagat cgataccgcg
     1141 cttgaggctt tctataatgg cggctggttc gggcttgggc cgggcgaggg catcgccaag
     1201 cgcagcctgc cggacagcca taccgatttc gtgttcgcgg tggcggcgga ggaattcggc
     1261 atcgtgctct gcctgatcct gctgtcgctg ttcgccttcg tcgtgatccg cgcgctgtcg
     1321 cgcgcctatg cgaccgagga catgttctcg cgttttgcgg cttccgggct cgcggtgctg
     1381 ttcggcatac aggctgcgat caacatgtcg gtcaatctgc aactaatccc tgcgaagggc
     1441 atgacgttgc cgttcatctc ttatggtggc tcgtcgatgg tctcgctggc ctacggcgtc
     1501 ggcatgatgc tggcgctgac aaggcagcgg ccacgcaccg agat
//
LOCUS       DATAVD010001899         4288 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3153436, whole genome shotgun sequence.
ACCESSION   DATAVD010001899 DATAVD010000000
VERSION     DATAVD010001899.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4288
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3153436"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..1464)
                     /locus_tag="VHX39_36165"
     CDS             complement(64..1464)
                     /locus_tag="VHX39_36165"
                     /inference="COORDINATES: protein motif:HMM:NF018938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HEX3996636.1"
                     /translation="MSASGRILSEIRRSRRPLRLMGASGQLGYGIPTPGFNAGLAKRP
                     DLIGCDMGSIDIGPTYLGKGELATAPEATRRDLRKVLLAARELDVPLVIGSAGSAGAA
                     PHLDATLALLRDIARTDRLRFRMAVIRADVARPMLLEALRNGRIVSFDDMPPLTEDEI
                     TGAAQIVGQMGTGVFRRALEADVDVVIAGRACDTGIFAALPMLLGFPAGLAMHMAKII
                     ECASLCCVPGGRDPIIAELDDDGFVLESTSPERRATPTSVAAHSLYEQADPFTVHEPE
                     GTLDLSNARYEAVDDRRTRVSGAVWHDTDSPTIKLEGARLIGERAVLLAGAADPRFIA
                     QSKEILPKLSDLVRDLVCEDQPQDYTLRWRVYGVDGVRMVVPAGETPPGEVFIMGECI
                     APTRERASEVVRTCKQYLLHFGYPGRLSTAGNLAFPFTPPEVSLGPAYRFNVYHLLKV
                     DDPDILFPMNIETVQG"
     gene            complement(1461..1763)
                     /locus_tag="VHX39_36170"
     CDS             complement(1461..1763)
                     /locus_tag="VHX39_36170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4387 domain-containing protein"
                     /protein_id="HEX3996637.1"
                     /translation="MKLSDIAQVIRSKNAGPRRLTLDVMFGSDADYQRVAQSPALGAE
                     AVGLLYGVPAEAVTVIPYPAGRAIKIVLARRIMAGDPGDVDVYGAQQHAPLLGIEL"
     gene            2038..2910
                     /locus_tag="VHX39_36175"
     CDS             2038..2910
                     /locus_tag="VHX39_36175"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0019632 - shikimate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEX3996638.1"
                     /translation="MINRQALIGLLGANIMKSLAPALHIDAFAAAGITGHYHLMDVDQ
                     LPGRTLQNLLAAVKTAGFIGVNVTFPFKQAVIPLLDQLSPEARQIGAVNTVVIGKTGH
                     TTGHNTDRSGFRLNFEDGLGRAAAEGKTAVLIGAGGAGSAVAFALMDLGLKTLIVHDQ
                     DKTRAISLAADVIAHYGAGRCRLSERLTEEIRAADGVANATPIGMAGFPGNPVPVDAL
                     RAAHWVADVIYSPMETELIKAAAAKGARTLTGGGMCVYQAVDAFRLFTGIDPDVARMH
                     RTFAAALAARDSVS"
     gene            2907..>4288
                     /locus_tag="VHX39_36180"
     CDS             2907..>4288
                     /locus_tag="VHX39_36180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007088243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HEX3996639.1"
                     /translation="MKTAIATVCLSGGLDEKLLAIANAGFKGVEIFENDLLSFNGTPR
                     DIRRAAGELGLDIVTFQPFRDFEGMPAEKRERNFTRAERKFDLMQELGCDLLMVCSNV
                     SPESAGGIDRAAEDFFALGERAAKRGMRVGFEALAWGRHINDYRDAWEVVRRAGHPSV
                     GLVLDSFHILSRKIDLRAMTAVPRDRIFLVQLADAPMLEMDYLSWSRHFRNFPGQGDF
                     PILDFMAALRQTGYDGLLSLEIFNDQFRAGSARSVAIDGHRSLIHLLDQMHWSTPPLP
                     PRARCLGCEFIEFALDEASEPAFSALLHSLGFTRSGVPKSKSVTRWSQGEINLVSNTE
                     KEGFAHSYYITHGTAVCALGLQVDDAAATLQRARGLLDQPFQQAVGPGELEIPAVRGV
                     GGSLIYFTDSASNLAQVWDIEFAAIGEAAADAGLTVVDHVSQSMHYEEMLTWVLFYSS
                     LLNLDKIPAQ"
BASE COUNT          803 a         1324 c         1365 g          796 t
ORIGIN      
        1 caaaagccga tttcatggtt gcgatcgtaa caccgttcgc gggaacacca aatgtcggtt
       61 ttgtcacccc tgaacggttt cgatgttcat cggaaacaaa atatcagggt cgtcaacctt
      121 caacagatgg tagacgttga aacggtacgc cggacctaac gaaacctcgg gcggggtaaa
      181 cggaaacgcc aggttgccgg ccgtcgacag ccggccggga taaccgaaat gcaacagata
      241 ttgcttgcag gttcgcacga cttccgacgc ccgctcgcga gtcggtgcga tgcattcgcc
      301 catgatgaac acttcgcccg gtggggtttc tcccgctggc accaccatgc gcacgccgtc
      361 caccccgtac acccgccacc gcaatgtgta atcctgaggc tgatcctcgc aaaccaggtc
      421 gcgcacaagg tcggacagtt tcggcaaaat ctccttgctc tgcgcgatga atcgcggatc
      481 ggcggcaccg gcgagcagca ccgcacgttc cccgattagc ctcgcaccct ccagcttgat
      541 cgtcggactg tcggtgtcgt gccacaccgc acctgagaca cgcgtgcgcc ggtcatccac
      601 cgcctcgtaa cgggcattcg acagatcgag cgtgccctcc ggctcatgca cggtgaacgg
      661 atccgcctgc tcgtacaggc tatgcgcagc gaccgaggtc ggggtggcgc ggcgctccgg
      721 gctggtgctc tccagcacga acccgtcgtc gtcgagttcg gcgataatgg ggtcgcgccc
      781 accaggcacg cagcacagcg atgcgcattc aatgattttc gccatgtgca tcgccagacc
      841 ggcggggaaa cccaacagca tcggcagggc tgcaaaaatc ccggtgtcgc aggcgcggcc
      901 ggcgatgacc acgtcgacgt ctgcctccag cgcgcggcgg aacacgccgg tgcccatctg
      961 gccaacgatt tgagcagcgc cggtgatctc gtcctcggtc agaggcggca tgtcgtcgaa
     1021 gctcacaatg cggccattgc ggagtgcctc caacagcatc ggccgtgcca cgtcggcgcg
     1081 gatcaccgcc atgcggaacc gcagccggtc ggtccgggcg atgtcgcgca gcagcgccag
     1141 cgttgcgtcc agatgcggtg cagcgcccgc cgatccggcc gagccgatga ccagcggcac
     1201 atccagctct cgcgcggcga gcagcacctt gcgcagatcg cggcgggttg cctcgggcgc
     1261 ggtcgccaat tcgcctttgc ccagataggt cgggccaatg tcgatcgagc ccatgtcgca
     1321 accgatcagg tccggccgct tggcaaggcc cgcattgaaa ccgggggttg gaatgccgta
     1381 accgagctgg cccgacgcac ccatcaaacg cagcgggcga cgggagcggc gaatttcgga
     1441 cagaatgcgg ccagaggcac tcatagttcg atccccagca aaggcgcgtg ttgctgcgca
     1501 ccgtacacgt caacgtcgcc gggatcgccg gccatgatgc ggcgggcgag cacgatcttg
     1561 atcgcccggc cggcgggata cgggatgacg gtgaccgcct cggccggcac gccatacagc
     1621 aggccgaccg cctcggcgcc gagtgccgga gactgggcga cccgttgata gtcggcgtcg
     1681 ctgccgaaca tcacgtccaa tgtcagccgt cttgggcccg cattcttgct gcgtatgacc
     1741 tgggcaatgt cggagagctt catgcgatga tgcctgcgat ccatggttga tcccaccgcc
     1801 ggtacgatgc cagatgcggg ctcggtcatc cagacatggc cggacgcggg ccgcaagtcc
     1861 aacaggcacc gtcccacccc ggacctcgcg cgccggacga gtatcaatcg gagggatgta
     1921 tacgaccaac tgcgggcgca gagctccggc ggcgagaaac cggcaacagc gtcagcctga
     1981 cggttgacct tgcccgaacc tgtgcgacaa cctcatgcgg caactggagc aaacgcgatg
     2041 atcaatcggc aggctctgat cggattgctg ggtgccaaca tcatgaagtc gctggcgccc
     2101 gcgttgcata tcgacgcctt cgcggcggcc ggcatcacgg ggcactatca cctgatggat
     2161 gtcgatcagt tgccgggccg gacgctgcaa aacctgcttg cggcggtgaa gaccgccggc
     2221 ttcatcggcg tgaacgtgac gttcccgttc aagcaggcag tcattccgct gctcgatcag
     2281 ctgtcgcccg aggcgcggca gatcggcgcg gtcaacaccg tggtaatcgg caagaccggc
     2341 cacaccactg gccataacac cgatcgcagc ggcttccggc tgaatttcga ggacgggttg
     2401 gggcgcgccg cggctgaggg caagaccgcg gttttgatcg gagccggcgg cgccggcagc
     2461 gcagtggctt tcgcgctgat ggacctcggc ctgaagacgc tgatcgtgca cgaccaggac
     2521 aaaacgcgcg ccatatctct ggccgccgat gtgatcgctc attacggtgc cggccgttgt
     2581 cgcttatcgg aacgcctgac cgaggaaatc cgcgcagcgg acggcgtcgc caacgccacg
     2641 ccgatcggca tggcgggctt ccccggcaac cccgtgcctg tcgacgcgtt gcgcgccgct
     2701 cattgggtcg ccgatgtcat ctacagcccg atggaaaccg agttgatcaa ggcggctgcc
     2761 gcgaaaggtg cgcgtacgct gaccggtggc ggcatgtgcg tgtatcaggc ggtcgatgcg
     2821 tttcggttgt tcaccggcat tgatcccgat gtcgcacgaa tgcaccgcac attcgctgcg
     2881 gcgcttgcgg cacgggatag cgtgtcatga aaaccgccat tgcgacggtt tgcctcagcg
     2941 gcggcctgga cgaaaaactg ctggccatcg ccaatgccgg ttttaagggt gttgagattt
     3001 tcgaaaacga tctgctttcg ttcaacggca cgcccaggga tatcaggcgt gctgcgggcg
     3061 aactggggtt ggatattgtg acgtttcagc cattccgcga ttttgaaggc atgccggccg
     3121 aaaaacgcga gcgtaatttt acccgggccg aacgcaagtt cgatctgatg caggaactcg
     3181 gctgcgattt gctgatggtt tgctctaacg tgtcgccgga aagtgccggt ggcatcgacc
     3241 gtgccgccga agattttttc gcacttggcg aacgcgccgc gaagcgtggc atgcgagtgg
     3301 ggttcgaggc gctggcctgg ggccgtcaca tcaacgacta ccgcgatgcg tgggaggtgg
     3361 tgcggcgcgc gggtcaccca tcggtcgggc tggtgctgga ttcatttcac attctgtcgc
     3421 gcaagatcga tctgcgagcg atgaccgcgg tgccacgaga cagaatcttt ctggtgcaac
     3481 tggccgacgc gccgatgctg gaaatggatt acctgtcctg gagccggcat ttccgcaatt
     3541 ttccgggcca gggcgacttc cccatactcg acttcatggc ggcgttgcgg cagaccgggt
     3601 atgacggatt gctgtcgttg gagatcttca acgatcagtt ccgcgccgga tcggcgcgca
     3661 gcgtggccat cgatggccat cgctcgctga tccatttgct ggatcaaatg cactggtcga
     3721 cgccgccact gccgccacgc gcccgctgtc tgggctgcga attcatcgaa tttgccctcg
     3781 atgaagccag cgagccagcg ttcagtgcgc tgttgcatag tcttggtttc acccgtagtg
     3841 gcgtgcccaa atcgaagtcg gtgacccgat ggtcgcaggg tgaaatcaat ctcgtcagca
     3901 acaccgaaaa ggaaggcttt gcgcattcct actacatcac acacggcacg gcggtttgtg
     3961 cgcttggctt gcaggtcgac gatgccgcag ccacgttaca gcgggcgcgc gggctgctcg
     4021 atcagccgtt ccagcaggcg gtaggcccgg gagaacttga gattccagcg gtgcggggcg
     4081 tgggtggaag tttgatttac tttaccgatt cggcgagcaa cctggcacag gtctgggaca
     4141 tcgagtttgc cgccatcggc gaagcagcgg cggatgccgg tctgaccgtt gtcgatcatg
     4201 tttcgcagtc gatgcactat gaagagatgc tgacctgggt gttgttttat tcgtcgttgc
     4261 tcaatctgga caaaatcccg gcgcagga
//
LOCUS       DATAVD010001900         2290 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2603972, whole genome shotgun sequence.
ACCESSION   DATAVD010001900 DATAVD010000000
VERSION     DATAVD010001900.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2290)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2290)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2290
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2603972"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..474)
                     /locus_tag="VHX39_36185"
     CDS             complement(<1..474)
                     /locus_tag="VHX39_36185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996640.1"
                     /translation="MALKGDLASRYRLPAIGWGSHFCNSGSPPRILALSADGVCGRSM
                     QHTHRDAGPWPAGLPKLLSFDVFGTLIDTHFGTYAAYRSILDDAGGREMELRPFWGYW
                     QQRNIAHYSEPYQSYKEICRLALEETFEHFGLHGADGSLIERYFEAYARLQLYPDV"
     gene            506..1435
                     /locus_tag="VHX39_36190"
     CDS             506..1435
                     /locus_tag="VHX39_36190"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3996641.1"
                     /translation="MPQWDDIRLLLAVASQGSYARAARQTGVSLATISRRLRALEQSL
                     GVVLVERRADGHRLTHQAQALLPAASRMAAAAGDLRASAGPGHAEIRILAREWEALFL
                     IRHLSELTSMLPNIEIEIGYKHWPDLARWEADLILTDHTSTAANVVARKLGRMAFAVY
                     GSQTYVAGRQQAFSPDRYRDCNWVGFTAAHRYFSAEQWLTRQRPDGAPATHRFDNAFM
                     LLEAVRGGIGLGLLPVWLGEHDPLLVRVSEVLPDLLHQTSYLMNADLRHEPRLRAVAD
                     AIALLFRRERPSVAGETIGEGQAVRRPNSLDIG"
     gene            complement(1681..>2290)
                     /locus_tag="VHX39_36195"
     CDS             complement(1681..>2290)
                     /locus_tag="VHX39_36195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEX3996642.1"
                     /translation="RLAQMARAAGIHVIMATQRPSVDVITGTIKANFPTRISFQVISK
                     FDSRTILGEQGAEQLLGMGDMLYMQGGGRVTRVHGPFVSDDEVEKVVAFLREQGEPAY
                     LDDVTEPMEGSGGGGGDADPLLSGMAGASDGDKSLFDQAVDIVAREGKASTSFIQRHL
                     NIGYNKAAKLIEQMEKEGIISTANHVGKREILVRRINDDMDC"
BASE COUNT          391 a          753 c          711 g          435 t
ORIGIN      
        1 cacgtccggg tagagttgta agcgtgcata agcctcgaag tagcgctcga tcagcgagcc
       61 gtcggcgcca tgcaggccga aatgctcgaa ggtttcttca agcgcgagac ggcagatttc
      121 cttgtacgat tgatagggtt cgctgtagtg ggcaatgttg cgctgctgcc agtagcccca
      181 gaatgggcgc agttccattt cccgcccacc ggcgtcgtcg aggatcgagc ggtaggcggc
      241 gtaggtaccg aaatgtgtgt cgatcagcgt gccgaaaacg tcgaatgaca gaagtttcgg
      301 caaccccgcc ggccacggac cggcatcgcg gtgtgtgtgt tgcatcgacc gaccacagac
      361 cccatccgcc gacagcgcca gtatccgcgg cggcgaaccg gagttgcaga aatgcgaccc
      421 ccatccgatg gcgggcaggc ggtatcggct tgcaagatcg cctttcagtg ccatgctgcg
      481 gcgatcacgc agtccgaggg cccctttgcc gcagtgggac gacattcggt tgcttctggc
      541 ggtcgcgagc cagggaagct acgccagggc ggcgcggcag accggggtca gtctcgccac
      601 aatcagccgc cggctccgtg ccctggagca atcgctcggt gtcgtgctgg tggagcgacg
      661 ggccgatgga caccggctga cccatcaggc gcaggcgctg ctacctgccg ccagcaggat
      721 ggccgccgcg gcgggagacc tgcgtgccag tgccggcccc ggtcatgccg aaatccgtat
      781 cctggcccgg gaatgggaag ccttgtttct gatccggcat ttgtcggaac tgacgtcaat
      841 gctgcccaac atcgaaatcg agatcggcta taaacattgg cccgacctgg cccgatggga
      901 agccgatctg atcctgaccg accacacctc caccgccgcc aacgtggtcg cccgcaagct
      961 tgggcgcatg gcattcgcag tgtatggcag ccagacctat gtcgcgggca ggcaacaggc
     1021 attctcaccg gatcgctatc gtgactgtaa ctgggtcgga ttcacggccg cccatcgtta
     1081 cttttccgca gaacaatggt tgacgcgcca gcgtccggac ggtgcgccgg cgacccatcg
     1141 gttcgacaac gcattcatgc tgctggaagc ggtgcgcggt ggcatcggac tgggtctgtt
     1201 gccggtttgg ctgggcgaac atgacccgct gctggtgcgc gtgtcggagg ttttgccgga
     1261 ccttctccat cagaccagct acctgatgaa cgccgatttg cgccacgaac cgcgcctgcg
     1321 cgccgtcgcc gatgccatcg ccctgctgtt ccgccgcgaa cggccctctg tcgccggcga
     1381 gacgatcggc gagggtcagg ccgtgcgccg ccccaacagc ctggacatcg gatagcttcc
     1441 actcgaaccg aactttccca cgggcggccc gtcttcggtg cagcctgccc ggtggtagaa
     1501 acgccgcgcc gtctcggtgc tgagcagata acagcgctca ttgccctccc gcaccgcccg
     1561 ttcttccagc gcaccgatca ccgctcggct tacgccacaa aaccggtcac ggtaacccct
     1621 cggccaccat gacgaaggcc gaccgtgctc tggccgagcc gcttaatggc tggggatcgc
     1681 ctagcaatcc atgtcgtcgt tgatccgtcg caccaggatc tcccgctttc cgacatggtt
     1741 tgcggtgctg atgatgcctt ccttttccat ctgctcgatc agtttggccg ccttgttgta
     1801 gccgatgttc aggtgccgct ggatgaatga ggtggaggcc ttgccctcac gcgcgacgat
     1861 gtccacggcc tggtcgaaga ggctcttgtc gccgtcgctg gcgccggcca tccctgacag
     1921 cagcgggtcg gcatcgccgc cgccgccgcc ggaaccctcc atcggttcgg tgacgtcatc
     1981 cagataggcc ggttcgccct gttcgcgcag gaaggcgacg accttctcca cttcatcgtc
     2041 cgaaacgaac gggccatgca cgcgggttac ccggccgcca ccttgcatat acagcatgtc
     2101 gcccatgccc agcagttgtt cggctccctg ctcacccaag atcgtccggc tgtcgaattt
     2161 gctgatcacc tggaagctga tgcgggtcgg gaagttggcc ttgatcgtgc cggtgatcac
     2221 gtccaccgac gggcgctgcg tcgccatgat cacatggata ccggccgcgc gggccatctg
     2281 tgccaggcgc
//
LOCUS       DATAVD010001901         2011 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1668265, whole genome shotgun sequence.
ACCESSION   DATAVD010001901 DATAVD010000000
VERSION     DATAVD010001901.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2011
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1668265"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1182
                     /locus_tag="VHX39_36200"
     CDS             <1..1182
                     /locus_tag="VHX39_36200"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX3996643.1"
                     /translation="LLGLAALNRLALTDRLAGETPTAARRHMRVSIAMEMVLGLLVVI
                     TAGFLASHTPGTHEQPVWPFPWRLDLGVFQEPGLRGEAIVALVAAAAAVAVASAGLIW
                     RKVRWPALIAAAIVLVLVVPRLGLLFVEAWPTTFYSSPTDFAVTSIVHGANLFAANCV
                     VCHGPEGRGDGPAAKLLPVRPADLTAPHLLAHSEGDLFWFISHGLDGPNGQAAMPAFS
                     GMLSSEGIWALIDYLRAHHAGLTMQGGGPGGDAVPIPQFDAQCADGTVVDREALRGTI
                     LHIVSMPEHAPPPPALPSVEGVAVRTILLARHPPMPPIAGTCVTVEPEAWAAFAILLG
                     VTPDELAGTELLGDTDQWLRAVWESADAGKWNDPQQAVAMIRDIAAHPLAPASEHAHH
                     H"
     gene            complement(1215..>2011)
                     /locus_tag="VHX39_36205"
     CDS             complement(1215..>2011)
                     /locus_tag="VHX39_36205"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3996644.1"
                     /translation="ASGAIVAWFLRLALPESPRWLAQHGHAEAAERITRMIEDKVETQ
                     SGRTLPPPHTLDDEVEHNLGSFGEMFRAPYLQRTCMLIVFQILQVVGYYGFTSWVPTL
                     LLAQGITVTKSLAYTVIIAAANPAGALAATWFADRCERKWQLAFAALGIAVFGLIFSQ
                     QTSAGGIMVVGTLIAFSNTVLAYSLHAYQSELYPTRIRARAVGFTYSWSRISTVFVGF
                     MIAWCLRNYGTLGVFTFIAGAMIIVFLVIAIMGPRTTGLRLEAISR"
BASE COUNT          372 a          638 c          622 g          379 t
ORIGIN      
        1 ctgctgggct tggcggcact caaccggctg gcgctcaccg atcggttggc cggagagacg
       61 ccgaccgcgg cgcgccgcca catgcgagtt tccatcgcca tggaaatggt actgggcttg
      121 cttgtggtga tcacagcggg atttctcgcc tcgcacacgc ctgggacgca tgagcaaccg
      181 gtttggccgt tcccgtggcg actggacctt ggggtgttcc aggaaccggg tctgcgcggc
      241 gaagcgatcg ttgctctggt cgcggccgcc gctgccgtgg cggtcgccag tgccggtttg
      301 atctggcgca aagtgcgttg gccggcgctt atcgcggctg cgatcgttct ggtcctggtg
      361 gtgccgcgtc tcggtctgct gttcgtcgag gcctggccga ccactttcta ttcctcgccc
      421 accgatttcg ccgtcacatc gattgttcac ggcgccaatc tgttcgcagc aaattgtgtc
      481 gtttgccacg gaccggaagg ccgtggcgac ggcccggcgg ccaaattgct gccggtgcgg
      541 cccgccgatc tcaccgcgcc gcacctgctg gcgcatagcg aaggcgacct gttctggttc
      601 atctcccatg gcctcgacgg gcccaatggg caggcggcga tgccagcctt ttcaggcatg
      661 ctatcgagcg aagggatttg ggccctgatt gattatttgc gcgcgcacca cgccggtctg
      721 acgatgcaag gcggcgggcc cgggggggac gccgtgccga tcccgcagtt cgacgcacaa
      781 tgcgctgacg gaacagtggt cgaccgggag gcattgcgcg gaacgatcct tcacatagtt
      841 tccatgccgg aacatgcgcc accaccgcct gccctaccgt cggtggaagg cgtcgctgtc
      901 agaacgatcc tgctcgcacg gcatcctcct atgccgccca ttgcgggcac gtgcgtcact
      961 gtggagcccg aagcgtgggc tgctttcgcg atcctgctcg gggtcacgcc cgacgagctg
     1021 gctggaactg agcttctcgg cgacactgat caatggctta gggcagtctg ggaatccgct
     1081 gacgccggca aatggaatga cccgcagcaa gcggtggcga tgatccgcga cattgccgcg
     1141 catccgctcg cgcccgccag cgagcacgca catcatcatt aggtctcagt tgcagcttga
     1201 agcgcctcct ttggtcatcg cgaaatcgct tccaggcgca acccggtcgt gcgtgggccc
     1261 atgatcgcga tgaccagaaa cacgatgatc attgcaccgg cgatgaatgt gaacacgccg
     1321 agcgttccgt agttccgtag gcaccaggcg atcatgaagc caacaaatac cgtgctgatc
     1381 cggctccagg aataagtgaa tccgactgct ctggcacgga tccgggtcgg atacagttcc
     1441 gattgataag cgtgcaacga atacgccaac acggtgttgg agaacgcgat cagcgtgccc
     1501 acaaccataa tcccccccgc actggtctgt tgcgagaaaa tcagcccgaa cacggcgatc
     1561 ccaagtgcgg caaacgccag ctgccacttg cgttcgcagc gatcggcgaa ccaggttgcc
     1621 gccagcgcgc cggccgggtt ggccgctgca ataatcaccg tataggccag cgacttcgta
     1681 acggtgatgc cttgcgcgag cagcaacgtc ggcacccaac tggtaaaccc gtaatagccg
     1741 accacctgca aaatctgaaa cacgatcagc atgcaagtac gttgcaaata cggtgcgcga
     1801 aacatctcgc cgaacgaacc gaggttgtgt tcgacctcgt catccaacgt gtgcggcggc
     1861 ggcaatgtgc ggccggattg agtctcgacc ttgtcctcga tcatgcgagt gatacgctcg
     1921 gccgcttcgg catggccatg ttgggccagc cagcgcggtg actccggaag tgccagacgc
     1981 aggaaccacg caacgatcgc gccgctcgca c
//
LOCUS       DATAVD010001902         3825 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3719449, whole genome shotgun sequence.
ACCESSION   DATAVD010001902 DATAVD010000000
VERSION     DATAVD010001902.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3825
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3719449"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..378)
                     /locus_tag="VHX39_36210"
     CDS             complement(<1..378)
                     /locus_tag="VHX39_36210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996645.1"
                     /translation="MPRTSLLAELPEALPDRGVLVLQTRPGRGNRADPIRGEFLKHLV
                     TVYANRQAGLVQEDYYDRPWQILDQDSALLRRAGNALQSMRDAGRRGAVVVHIIIQGP
                     DNGAWRHQEVEQHLVELLTGRGAV"
     gene            608..1603
                     /locus_tag="VHX39_36215"
     CDS             608..1603
                     /locus_tag="VHX39_36215"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3996646.1"
                     /translation="MEIQALGYMGVGASNIDEWSDFATGWLGMQMVERGNTGRAFRMD
                     DRKQRLVIDRSLADGERYFGWEVADAAALQSLAARLEQAGVAVRQEPASLADQRFVRE
                     LISFADPAGNRLEAFHGAAVTADPFQPGRSISGFRTGPLGMGHAVFHVKNIDDLYGFY
                     HDVLGFGVSDYITTPFRAYFMHVNPRHHSVALIETGRQDLHHLMVELYSLDDVGQGYD
                     IALGQPDKIMTTLGRHPNDTVMSYYLKSPSGFMLEYGWGGRTVTPGNWTPTEVTVGPS
                     LWGHDRAWLPEDQREKARAMKLKAAQDGKREPVRVIEGNFSVMDGVCPWWDAVKG"
     gene            complement(1625..2803)
                     /locus_tag="VHX39_36220"
     CDS             complement(1625..2803)
                     /locus_tag="VHX39_36220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase family protein"
                     /protein_id="HEX3996647.1"
                     /translation="MADYLSAAEAAKRLGVSRQTLYAYVSRGLLRAHETSDPRQRRYA
                     FEAVTRLAEQRRRGRRPKEVAKATLDWGLPVMESAITLIQDGSLFYRGVDAATLAKIA
                     TVEDVAALLWQLPDAFGATLPSTPPVMQALADHVSREEALLPLFAAATTDDGTAFWQR
                     DPRRVAEGCGALVRTMLACVAGVPPTSAPLHRQLAKAWRLDSKGADLIRMALVLCADH
                     ELNASSFTARCVASTGASLRAAVIGGLAALSGPRHGGMTGRIETFWRGLDETNLAVDL
                     RRRLAADEALAGFGHPLYPAGDTRSAVLLGPILPHFPLARDLVTASGQLTGHAPNIDF
                     ALVTLRRFLKLPEGSAFGLFALGRSVGWIAHAIEQRQNGQLIRPRAVYTGPLPESAAN
                     "
     gene            2896..>3825
                     /locus_tag="VHX39_36225"
     CDS             2896..>3825
                     /locus_tag="VHX39_36225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012977895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEX3996648.1"
                     /translation="MADPVPPNAEGFLHHTWSSLGGSAALLPAAGFTGGGDLPSVFAV
                     SDLAAGVVAAAGLAVAELLAAGGATMPSVQVDRRLASFWFGTTLRPLDWSVPPPWDPI
                     AGDYQAADGWIRLHTNAPHHRDAALAVLQTPADKDAVAAAVASWQQDELEAAVVRQGG
                     CAAAMRDLASWSEHPHGRAVAAEPLAGIDAGDMAALSDWRPDRDRPLAGVRVLDLTRV
                     LAGPVATRFLAGFGADVLRIDPPGWDEPGVIPSVTLGKRCARLDLRQPSERRVFEDLL
                     RSTDVLVHGYRPDALSRLGLDVAARRRLRPGLVD"
BASE COUNT          676 a         1247 c         1223 g          679 t
ORIGIN      
        1 caccgcacct cgtccggtca gcagttcaac cagatgttgt tccacttcct ggtgccgcca
       61 ggcgccgttg tccggtccct gaatgatgat gtgaaccacc accgcaccac gccggccagc
      121 atccctcatg ctctgcaacg cattgccggc cctgcgtaac aacgcgctgt cctggtccag
      181 aatttgccac ggccgatcat aatagtcctc ctgcaccaac ccggcctgac ggttcgcata
      241 aaccgtcacc aggtgcttca ggaactcgcc gcggatcggg tccgcccgat tgccccggcc
      301 cggacgcgtt tgcagcacaa ggacgccgcg gtccggcaat gcctcaggca gttcggccag
      361 caatgatgtc ctgggcatgg tttcctccgg ctgagggaac acccaacacg ggacacgaca
      421 acaagttacg gaatcctttc taaggacctt gccaggccag ccaggtcccg gattctcgca
      481 tgagcgaatc gcagggctgt atcctcccgg acggcgagtc gagacaacgt cgcagaacgc
      541 cgttgcgcgc ggtttcccca accgggacca acttgctata accccggtca gcgcaggagg
      601 ctacagcatg gaaattcagg cacttggcta catgggcgtc ggcgcctcca acatcgacga
      661 gtggtcggac ttcgccaccg gctggctcgg catgcagatg gtcgagcgtg gcaacaccgg
      721 gcgggccttc cgcatggacg accgcaagca acggctggtc atcgaccgct cgctggccga
      781 cggcgagcgt tacttcggct gggaggttgc agacgccgca gcgctgcagt ccctcgctgc
      841 gcggctcgag caggccggcg tggccgtccg gcaggaaccc gcgtcgctgg ccgatcaacg
      901 gttcgtgcgc gaactgatca gcttcgccga tcccgccggc aaccggctcg aggcgtttca
      961 cggtgcagcg gtgacggccg acccgtttca accaggccgc tcgatttccg gcttccgtac
     1021 cgggccattg ggtatgggcc acgcagtgtt ccatgtgaag aacattgacg atctgtatgg
     1081 gttctatcac gacgtactgg gctttggagt cagcgattac atcacgacac cgttccgggc
     1141 ctattttatg cacgtcaatc cacgtcatca cagcgtggct ctgatcgaaa ccggtagaca
     1201 ggatctgcat catctgatgg tcgagctgta ctccctcgac gatgtcggcc aaggttacga
     1261 tatcgcactg ggccaaccgg acaagataat gaccactttg ggccgccacc cgaacgatac
     1321 ggtcatgtcg tattatctga agtccccgtc cggcttcatg ctggaatacg gttggggcgg
     1381 ccgcactgtc acacctggca attggacgcc caccgaggtg accgtcggcc caagcctgtg
     1441 gggtcatgac cgcgcctggc tgccggaaga tcaacgcgag aaagctcggg cgatgaagtt
     1501 gaaggcggca caggacggca agcgcgaacc agtgcgggtg atcgagggca atttttccgt
     1561 gatggacggg gtctgcccgt ggtgggacgc ggttaaggga taaaacctcg ggtcgccgta
     1621 gtcgtcagtt cgcagcactt tcgggcagcg ggccggtata gaccgcgcgc gggcggatca
     1681 gctggccgtt ttgccgttgc tcgatggcat gggcaatcca gccgaccgag cggcccaatg
     1741 cgaaaaggcc gaatgcactg ccttcgggta gtttcaggaa gcgccgtaac gttaccaggg
     1801 cgaaatcgat gttcggtgcg tgtccggtca actgcccaga agcggtcacc aaatcccggg
     1861 ccaacgggaa gtgcggcaat atcgggccca gcaaaaccgc ggacctggta tcgcccgcgg
     1921 gataaagcgg gtgaccgaag cccgccaacg cttcatcggc agcgaggcgc cgacgcaagt
     1981 cgaccgccag attggtttcg tccagtccgc gccagaaggt ttcgatccgg ccggtcatgc
     2041 cgccgtgccg tggcccgctc agcgccgcga gcccaccgat caccgcggcg cgcaaactcg
     2101 ctccggtcga ggcgacacag cgagccgtga aactcgacgc attcagttcg tgatcggcac
     2161 aaagtaccag cgccatacgg atcagatcgg cgcccttgct gtcgagccgc catgccttcg
     2221 ccaattgccg atgcagtggc gccgatgtgg gcggtacacc ggcgacgcag gccaacatgg
     2281 tgcgcaccaa cgccccgcac ccctcggcga cccggcgagg atcgcgctgc cagaacgcgg
     2341 tgccatcgtc agtcgtggca gcggcgaaca gcggcagcag cgcctcctcg cgtgacacgt
     2401 gatcggcgag cgcctgcatc accggcggcg tactgggcag cgtggcgcca aaggcgtcag
     2461 gcaattgcca cagcagtgcc gccacgtcct ccacggtcgc gattttggcc agcgtcgccg
     2521 cgtcgacgcc gcgatagaac agactgccat cctggatcag cgtaatcgct gattccatca
     2581 ccggcagacc ccagtcgagc gtcgccttgg caacttcttt gggccgccgc ccgcgccttc
     2641 gttgctcggc cagacgcgtt accgcctcga acgcgtaacg gcgttgccgc ggatcgctgg
     2701 tctcgtgcgc gcgcagcaga ccccggctga cgtaagcgta gagggtttgc cgcgataccc
     2761 cgagacgttt cgccgcttcc gcagccgaga gataatccgc cattctcccc cctgtatatg
     2821 ttgatcgggt taatcaagat tgacgataca ggaagtctgg catctggtgg tgcgcgttga
     2881 caaggagcat ccgccatggc cgaccctgtg cctccaaacg ccgaaggttt ccttcaccac
     2941 acgtggtctt cgcttggcgg cagcgcggcc ttgctgcctg cggccgggtt taccggaggc
     3001 ggcgatctgc catcggtctt cgcggtcagc gacctcgctg ccggtgtcgt cgcggcggcg
     3061 ggcctcgcgg tcgccgagct gcttgccgcc ggtggagcga caatgccatc agtccaggtc
     3121 gaccgaaggc tggcatcgtt ctggttcggc accacattgc gaccgctgga ttggtctgtt
     3181 ccgccgccct gggacccgat cgccggcgat taccaggcag cagatggctg gatccggctg
     3241 cacaccaatg caccacatca tcgggacgcc gcgctcgcag tactgcaaac gccggccgac
     3301 aaggatgcgg tcgctgccgc ggttgcaagc tggcagcagg acgaactgga ggcagcggtg
     3361 gtgcgacagg gcggctgtgc cgcagcaatg cgcgatctcg cgtcctggtc tgagcacccg
     3421 catgggcggg cagtggcggc cgagcctctg gccgggatcg atgccggcga catggcggcg
     3481 ctttcggact ggcggccgga tcgtgaccgc ccactcgccg gggttcgcgt gctggatttg
     3541 acccgagtgc tggccggtcc ggtggcgacc cggttcctgg ccgggtttgg cgccgacgtt
     3601 ctccgcatcg atccgccggg ctgggatgag ccgggcgtca tcccgtcagt gacattgggc
     3661 aaacgctgcg cccggctcga tttgcgacag ccatccgagc gccgcgtgtt cgaagatctg
     3721 ctgcgctcca cagatgtgct ggtgcacggc tatcggccgg atgcgctcag ccgtcttggc
     3781 ctggatgtcg cagcgcgacg gaggttgcgt ccaggcctcg tggac
//
LOCUS       DATAVD010001903         1993 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3339123, whole genome shotgun sequence.
ACCESSION   DATAVD010001903 DATAVD010000000
VERSION     DATAVD010001903.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1993
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3339123"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1436)
                     /locus_tag="VHX39_36230"
     CDS             complement(<1..1436)
                     /locus_tag="VHX39_36230"
                     /inference="COORDINATES: protein motif:HMM:NF025080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX3996649.1"
                     /translation="MQTRSPPVLVHPSGEHPSVEVYSAAADTFAGRIQVEWDATALVT
                     PLGQLPFFIDYLKQGGLFDAWVADCPLSFTSPNAPKKRDLLGTVMLSVLSGHRRYAHV
                     TALRCDPVNPPLLGMRKIVSEDAVRRGLAKIDEAKGLNWLQNHLDYCTTPLLSEPWVL
                     DMDSTVKTLYGHQEGAEIGYNPAKPGRPSHAYHTYMLSSLRLVLRVDVLPGDEYNVAH
                     ATDGLWSLLDHLGPARRPALLRGDKSWGIERVMSRAEQNDLAYLFRLRMTANVKRDLV
                     RAMRHSDWADGGQGWQGKETRLRLHGWSRHRRIILLRRKLAHGVAISDRSDPAQPLLS
                     FGEVEADKELWEYAALVTSLDSEILTLGQLYRDRADCENVFDELKNQWGWGGFTTQDL
                     HRCRLLAGTVALVYNWWSLFARLAEPEHHREALTSRPLLLSAIARRTQHAGQVTLSIS
                     SAHGLRDKARRAYVRIAGFLAELRINAE"
     gene            complement(1477..1803)
                     /locus_tag="VHX39_36235"
     CDS             complement(1477..1803)
                     /locus_tag="VHX39_36235"
                     /inference="COORDINATES: protein motif:HMM:NF024997.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HEX3996650.1"
                     /translation="MIALVVLWRLRYKLALRDLPEMFLIRSIVFSHEAVRDWEAKLTP
                     ALAEGLRRRRRGKVGKSWYVDETYIKVHGHWRYLYRAIDRNGALVDVMFSEDRDMAAA
                     KPKPGS"
BASE COUNT          368 a          643 c          601 g          381 t
ORIGIN      
        1 tgctccgcat tgatccgcaa ctcggccagg aagcccgcga tccgtacata ggctcgacgt
       61 gctttgtccc gcaggccgtg tgcgctgctg atgctgagtg tcacttggcc ggcatgctgg
      121 gttcgccgcg caatggccga cagcagcaat ggccggctgg tcagtgcttc gcggtggtgt
      181 tcgggttcgg ccaggcgcgc gaacaagctc caccagttgt agaccagcgc caccgtgcca
      241 gcgagcagcc ggcaacgatg caaatcctgc gtcgtgaagc cgccccagcc ccactggttc
      301 ttcagttcgt caaagacgtt ctcgcaatcg gcccggtcgc gatacaactg gcccagggtc
      361 aggatttcgc tgtccagcga ggtcaccagt gcagcgtatt cccacagttc cttgtccgct
      421 tcgacttcac caaagctcag caacggttgg gctgggtcgc ttcggtcgct gatcgcgacg
      481 ccgtgcgcca gtttgcggcg caacagaatg atgcggcgat gccggctcca gccatgcagg
      541 cgcagacggg tttccttgcc ttgccatcct tgcccgccat ccgcccagtc gctgtggcgc
      601 atcgcacgga ccagatcgcg tttgacgttc gcggtcatcc gcaggcggaa cagataggcc
      661 agatcgtttt gctccgcgcg tgacatgaca cgctcgatgc cccaggattt gtcgccgcgc
      721 agcagcgccg gacggcgtgc tggaccgaga tgatccagca acgaccagag gccgtcggtg
      781 gcgtgagcga cattgtattc gtcgccgggc agaacatcga cgcgcaacac cagccgcagg
      841 ctggatagca tgtaggtatg gtaggcgtgg gatggccggc cgggtttggc cggattgtag
      901 ccgatttcgg caccttcctg atgcccgtac aaagtcttca cggtgctgtc catatccagc
      961 acccacggtt cgctcagcag cggggtggtg caatagtcca ggtgattttg cagccagttc
     1021 aggcctttgg cctcgtcgat cttggccagg ccgcggcgca ccgcgtcctc gctgacgatc
     1081 ttgcgcatcc caagcaaagg cgggttcacc gggtcgcagc gcagcgcggt cacatgcgca
     1141 taccggcgat ggcccgacag caccgaaagc atcaccgtgc cgagcaggtc tcgcttcttc
     1201 ggtgcgttcg ggctggtgaa cgacagcggg caatcggcaa cccaggcgtc gaacagtccc
     1261 ccttgcttca ggtaatcgat gaagaatggc aactggccaa ggggcgtgac cagtgctgtt
     1321 gcatcccact cgacctggat gcggcccgca aaggtgtccg ctgccgccga ataaacttca
     1381 accgaggggt gctcacccga tgggtgaacc aaaactggag ggcttcttgt ctgcatcccc
     1441 gcagattcca acgattcggg cgtgatcggc aatcagctaa ctgccgggtt taggtttagc
     1501 ggcggccatg tcgcggtcct cgctgaacat cacgtcgacc agcgccccgt tgcgatcaat
     1561 ggcacgatag agatagcgcc agtgcccgtg cactttgatg taggtctcgt cgacgtacca
     1621 gctcttcccc accttgccgc gtcggcgacg gcgcaaacct tcagccaatg caggcgtgag
     1681 tttggcctcc caatcgcgaa ccgcttcgtg gctgaagacg atgctgcgga tcaggaacat
     1741 ctccggcaga tcacgcaggg caagcttata gcgcaaacgc cagagcacca cgagcgcgat
     1801 cacgtcactg gggtactgcg tacggttcag aacgccggtg ctccgctcgt taaactgctt
     1861 actgcaggcc cggcagcgga accggcggta accctgagcg gttcgctcat tccgttccga
     1921 aacggccgct gagccgcacc cgacgcatcc catcttccat cccgcctcct cgccgaggcc
     1981 ctatatcaac acc
//
LOCUS       DATAVD010001904         1910 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1110039, whole genome shotgun sequence.
ACCESSION   DATAVD010001904 DATAVD010000000
VERSION     DATAVD010001904.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1910
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1110039"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            8..898
                     /gene="bchL"
                     /locus_tag="VHX39_36240"
     CDS             8..898
                     /gene="bchL"
                     /locus_tag="VHX39_36240"
                     /EC_number="1.3.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0015995 - chlorophyll biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin:protochlorophyllide reductase
                     (ATP-dependent) iron-sulfur ATP-binding protein"
                     /protein_id="HEX3996651.1"
                     /translation="MTVIRRIPVRGDGEGSVQVQMAPDLKIGNAQVFAVYGKGGIGKS
                     TTSSNLSVAFSKLGKRVLQIGCDPKHDSTFTLTKRLVPTVIDILETVNFHSEELRVED
                     FVYQGYNGVMCVEAGGPPAGTGCGGYVVGQTVKLLKEHHLLEDTDVVIFDVLGDVVCG
                     GFASPLQHAGRALIVAANDFDSIFAMNRIVAAIQAKARNYEVRLAGVIVNRSAGSDQI
                     DKYNERTGLKTLAHFPDLDVIRRSRLKKSTLFEMEPTPEIVAVQDEYLHLATTLLAGT
                     EPLETRSMKDRDIFDLLGFD"
     gene            898..1593
                     /gene="bchM"
                     /locus_tag="VHX39_36245"
     CDS             898..1593
                     /gene="bchM"
                     /locus_tag="VHX39_36245"
                     /EC_number="2.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046406 - magnesium protoporphyrin IX
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0015995 - chlorophyll biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium protoporphyrin IX methyltransferase"
                     /protein_id="HEX3996652.1"
                     /translation="MPTMTYATRRGELMQYFDRTAVDAWKRLTSDAPVNSIRATVRAG
                     RDEMRRTLMGWLPNDLHGMRLLDAGCGTGALSVEAARRGAHVVAIDLSPTLVELARER
                     QPNDLGSGVIEFHVGDMLDPTLGLFDYVVAMDSLIHYRPKDTMRVLEVLGQRTDRSLL
                     FTFAPRTPVLSVMHAVGRLFPRGDRAPAIEPVRPQTITRLIQSDLAGWSAHRTHRVST
                     GFYISQAMEVLPR"
     gene            1590..>1910
                     /locus_tag="VHX39_36250"
     CDS             1590..>1910
                     /locus_tag="VHX39_36250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PucC family protein"
                     /protein_id="HEX3996653.1"
                     /translation="MSQLGAKFARTWTHVGTRFLPFADAATPELPLGRLLRLSLFQVS
                     VGLAVVLLIGTLNRVMIVELGVPAWLVAVMISLPLVFAPFRAFVGFRSDTHRSVLGWR
                     RVPYI"
BASE COUNT          341 a          578 c          605 g          386 t
ORIGIN      
        1 aggcggcatg acggttatca ggcggatccc ggtacgaggc gacggcgaag gcagcgtgca
       61 agtgcaaatg gcacctgatc tgaagatcgg caacgcccag gtgttcgccg tctatggcaa
      121 gggcggcatc ggcaaaagca cgacgtcttc caatctgtcc gttgcctttt caaagcttgg
      181 caagcgcgtg cttcagatcg ggtgcgaccc gaaacacgat tcgacgttca ccctgaccaa
      241 gcggctggtg ccgacggtga tcgacatcct ggagacggtg aatttccatt cggaggaact
      301 gcgagtcgag gactttgtct atcaaggcta caacggcgtg atgtgtgtgg aggcgggcgg
      361 ccctccggcc ggcaccggct gcggcggcta tgtcgtcggc cagacggtca agctgctgaa
      421 agagcatcac ctgctggaag ataccgacgt ggtgatcttc gatgtgctgg gcgacgtcgt
      481 atgcggcggc tttgcctcgc cactgcaaca tgccgggcgt gcgctgatcg ttgcggcgaa
      541 cgacttcgac tcgattttcg cgatgaaccg catcgttgcg gcgattcagg ccaaggcccg
      601 caactatgag gtccggctgg ccggcgtgat cgtcaatcgc agcgcgggtt cggatcagat
      661 cgacaagtac aatgagcgga ccggtctgaa gaccctggcc catttccccg acctggatgt
      721 aattcgccgt tccaggttaa aaaaatcaac acttttcgag atggaaccga cgccggagat
      781 cgtcgcggtg caggacgaat acctgcacct cgccacgacc ctgctggccg gcaccgaacc
      841 gttggagacg cgatcgatga aagatcgcga catcttcgac ctgctggggt tcgactgatg
      901 ccgacaatga cctacgcaac ccgtcgcggc gaattgatgc aatatttcga tcgcacggcc
      961 gtggacgcct ggaagcggct gacctcggac gcgccggtga acagcatccg cgcgaccgtg
     1021 cgggccgggc gcgacgaaat gcggcgtacg ttaatgggct ggctgccgaa cgatctgcat
     1081 ggcatgcgcc tgctcgacgc aggctgcggc accggcgcat tgtcggtcga agccgcccgt
     1141 cgcggcgcgc acgtggtcgc gatcgatttg tcgcccacgc tcgttgaact ggcacgcgaa
     1201 cgccagccga acgatctcgg cagcggcgtc attgaattcc atgtcggcga catgctcgat
     1261 cccacattgg ggcttttcga ctatgtcgtg gcaatggatt cgctgatcca ctacaggccg
     1321 aaagacacca tgcgcgtcct ggaagtactc ggacaacgca ccgatcggtc cttgctgttc
     1381 accttcgccc cgcgcacccc ggtgttgagc gtcatgcacg ccgtcggccg gctgtttccg
     1441 cgcggcgacc gggcgccggc aatcgaaccg gttcggccgc agaccataac gagactgatc
     1501 caatccgatc tcgccggctg gtcggcgcat cgtacgcatc gcgtatcgac gggattctac
     1561 atttcccagg ccatggaggt gctgccccgg tgagccaact cggtgccaaa ttcgcgagga
     1621 cctggacgca tgtcggcacg cgattcctgc cgttcgccga tgcggcgacc ccggaattgc
     1681 cgctgggtcg cctgctgcgc ctgtcgttgt ttcaggtctc ggtgggcctt gcggtggtgc
     1741 ttctgatcgg tacgctgaac cgggtcatga tcgtggaatt gggcgtgccg gcctggctcg
     1801 ttgcagtgat gatctcgctt cccctggtct ttgctccgtt tcgtgccttc gtcggattcc
     1861 gttccgatac gcatcgttcg gtcctgggct ggcggcgtgt gccgtatatc
//
LOCUS       DATAVD010001905         2719 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_183758, whole genome shotgun sequence.
ACCESSION   DATAVD010001905 DATAVD010000000
VERSION     DATAVD010001905.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2719
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183758"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            291..1454
                     /locus_tag="VHX39_36255"
     CDS             291..1454
                     /locus_tag="VHX39_36255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="HEX3996654.1"
                     /translation="MRSANTYLGSIGTTIFTVMSALATEHKSINLGQGFPDTEGPADV
                     VLAAVQALNDTRNQYPPMPGVPELRQAVAAANRRFYGLDIDWAREVTVTSGATEAITA
                     CLMAVLDPGDEVVLIEPLYDTYVPVVRMLGAIPRIVRLAPPHWDLPRAELADAFGPKT
                     KAILFNSPMNPCGKVFTAEELGFIADLVTRHDTYAICDEVYEHLVFDGAKHIPLMTLP
                     GMRDRTMRIGSAGKTFSLTGWKVGYVTAGAALTPLVQKAHQNLTFTTAPNLQRAVAVG
                     LAKDDAYFASLAGNLQARRDQLAEGLAAVGLSILPTQGTYFITTDFSPLGFNGDDVAF
                     CRHITEQAGVTAIPVSAFYDEGDAPRHYARFAFCKREAVLAEAIDRLKRHFRG"
     regulatory      1480..1660
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            1742..>2719
                     /locus_tag="VHX39_36260"
     CDS             1742..>2719
                     /locus_tag="VHX39_36260"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEX3996655.1"
                     /translation="MRQFCMLLGLGVLSVAAAHAEDVTPTVPETVVTATRVPTPVEEI
                     PAGVTVIDRATIEAHGYNTLTDALSAVPGLHVSPAGGPGGQTSVFIRGTNSDHVLVLR
                     DGMPLTDAADPTAAFNFGTDTLSDVERIEIIRGPMAALYGSGAIGGVINLISRRGSEP
                     GIHWSGDLAGGYPALIRGSVTASGIEGPLDFAVTAESQSQRGYDSIPQRQSVYAGVPQ
                     GFRDRIFTLNLGYTPVEGTRLSLFLRADTAYFGFNTLGSPTFDDSNSSGQTSSLLGRI
                     GGTTHLFDGKLETSVFVGQLQDDRRYLEPLAAADPNQTSSDSRYHSYRTD"
BASE COUNT          497 a          790 c          912 g          520 t
ORIGIN      
        1 ttgggcacct cgtatggcgt gtcgacgcat tccccgcagg gccagagcgc gcggaatgcg
       61 tccggagacg tcgggagcca ccggtccaat tgagtcgtgg atcggggctg ggcagcctgg
      121 aaaacgattg ccgcgtattt gcgcagttga aacagatgca tttcgcccgt tttttatgca
      181 gagagtgggg taaatatata cgatgcgtaa gcatcgtccc ggcctttcca acttggcctg
      241 cgggcgatat tccgtatcgc ttagcgactt gtcaggacgg agtgccatcg atgcgttcgg
      301 cgaacaccta tcttggatcc ataggcacca ccatcttcac ggtgatgtcg gcgctcgcga
      361 ccgaacataa gtcgatcaac ctggggcagg gattccctga tacagagggg ccggccgatg
      421 tcgtcctggc cgccgtccag gcgctgaacg atacccgcaa ccaatatccg ccgatgccgg
      481 gcgtgcccga actgcggcag gccgtcgcgg cggcgaacag gcgattctac ggtctggata
      541 tcgactgggc gagggaggtg acggtcacgt cgggtgccac cgaggcgatc accgcctgct
      601 tgatggccgt cctcgatccg ggtgacgagg tcgtgctgat cgagccgctt tacgacactt
      661 acgtgccggt cgttcgcatg ctgggtgcca ttccccgcat cgtacgcctg gcgccgccgc
      721 actgggacct gccgcgcgcc gagttggcag atgcgttcgg gccgaagacc aaagcaatcc
      781 tgttcaactc cccgatgaac ccgtgcggga aggtgttcac ggccgaagaa ctaggcttca
      841 tcgccgatct ggtgacgcgg cacgacacct acgccatttg cgatgaggtg tatgagcatc
      901 tggtgttcga cggggcgaag catatcccgt tgatgacact tccggggatg cgagaccgca
      961 cgatgcggat cggcagcgcc gggaagacgt tttcgctgac cggatggaag gtcgggtatg
     1021 taacggcggg ggctgcgctg acgccgctgg tacagaaggc gcatcagaac ctgacattca
     1081 ccaccgcccc caaccttcag cgcgcggttg ccgtggggct cgcgaaggac gacgcctatt
     1141 tcgcctccct ggccggcaat ctccaggctc ggcgcgatca actggccgag gggctggcgg
     1201 cggttgggct atcgatcctg cccacgcagg gcacctattt catcaccaca gatttttcgc
     1261 ccctgggctt taacggggat gacgtggcgt tctgccggca tatcaccgaa caggcggggg
     1321 tcacggcgat cccggtttcc gcgttctatg acgagggcga cgcgccacgg cactatgccc
     1381 gttttgcgtt ctgcaagcgg gaggcggtgc tggccgaggc gatcgaccgc ctgaaacgac
     1441 actttcgcgg ctgaattgcg tatcgacaac gacacactat agtgcgccgc agatgacggt
     1501 ggcccgcaag ggcttaaacg ggaactgccg aaaggcggct gccctcgcaa ctgtaagcgg
     1561 tgagccgggt ccagatgcca ttgtccccgt ggggatgaga aggcggaccc aaggcagaga
     1621 tccgcgagcc aggagaccgg ccggcatcga gactgcgcgc gtgtgccggg cgaggtgaac
     1681 cggggcggcg gggagaaacc cgcatgcgag caatcgacac attggtcgat ggggaagctg
     1741 catgcggcag ttttgtatgt tgttgggttt gggcgtgttg tccgttgcgg cggcacatgc
     1801 ggaggacgtc acgccgaccg tgccggaaac ggttgtgaca gcgacgcgcg tgccgacgcc
     1861 ggtggaggag attccggccg gtgtcacggt gatcgatcgg gcaacgatcg aggcgcatgg
     1921 atacaacacg ctaacggatg cgcttagcgc cgtcccaggc ctgcatgtca gcccggctgg
     1981 cggccctggc ggccagacca gcgtgttcat ccgtggcacc aattcagatc acgtgctggt
     2041 actgcgtgac gggatgccgc tgaccgacgc ggcggatccc acggcggcat tcaatttcgg
     2101 gaccgacacc ttgtccgatg tcgagcggat agaaatcatc cgtggtccga tggcggcgtt
     2161 gtatggttct ggggcgatcg gcggggtgat caacctgatt tcgcgccgcg gttcggagcc
     2221 gggcatccat tggagcggcg acctggccgg cggttatccg gcgctgatac ggggtagcgt
     2281 caccgccagc gggattgaag gtccgctcga ctttgcggtg acggcggagt cgcagtcgca
     2341 acgtggctac gattcgattc cgcagcggca gagcgtttac gcaggcgtgc cgcaagggtt
     2401 ccgcgaccgg atatttaccc tgaacctggg ctacacgccg gttgagggaa cacggttgtc
     2461 actgtttctg cgggcggaca cggcctattt cgggtttaat acgcttgggt ccccgacatt
     2521 cgatgattcc aactcgagcg ggcagacatc gtcgctgctg ggtcggatcg ggggtaccac
     2581 ccatctgttc gacggtaaat tggaaaccag cgtcttcgta gggcagttgc aggatgacag
     2641 gcgctatttg gagccgttgg cagcagccga tcccaatcag acgtcttccg actcgcgcta
     2701 ccattcctat cgcacggat
//
LOCUS       DATAVD010001906         1786 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2413951, whole genome shotgun sequence.
ACCESSION   DATAVD010001906 DATAVD010000000
VERSION     DATAVD010001906.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1786
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2413951"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..488)
                     /locus_tag="VHX39_36265"
     CDS             complement(<1..488)
                     /locus_tag="VHX39_36265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008617121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX3996656.1"
                     /translation="MGPLAGVKIVEFTGIGPAPMAAMMLADMGATIIRIDRTGPTDLG
                     VPMPEQYEFTKRSRAVIGLDLKRPEAVQLALRLIDGADALIEGFRPGVMERLGLGPDV
                     CLQRNPKLAYGRVTGWGQVGPLAHAAGHDLNYIALTGALHAIGRKGQKPTPPLNLVGD
                     YGG"
     gene            complement(624..1283)
                     /locus_tag="VHX39_36270"
     CDS             complement(624..1283)
                     /locus_tag="VHX39_36270"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEX3996657.1"
                     /translation="MPIRAVCFDVGETLIDETREWNGWADFLGVPRLTLFTALGVSMW
                     RGQSHRKVFEIFRPDLDFSTVRQQRAAQGWRYGFEPSDLYPDARACLTELRERGFKVL
                     IAGNQPKEAEQALHSLNLPVDFVASSAGWGVSKPDPRFFQLVIEAAGVAAGDIAYVGD
                     RVDNDVIPSRAAGMLAVFLRRGPWGWMHEERPEIEQAHLRLRTLHGLADLLSGTDIRA
                     S"
     gene            complement(1315..>1786)
                     /locus_tag="VHX39_36275"
     CDS             complement(1315..>1786)
                     /locus_tag="VHX39_36275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009538592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HEX3996658.1"
                     /translation="PMFYRQERVTLDGHVFQILKLRTMRVDAELDGAVWAAKGDNRIT
                     RSGSILRRTRIDELPQLINILKGEMSFVGPRPERPMFVDELAAQIPLYRERHMVKAGL
                     TGWAQVNYPYGASVDDARSKLSYDLYYVKNFSILFDLVILLQTLRVVLWPNGAR"
BASE COUNT          371 a          603 c          482 g          330 t
ORIGIN      
        1 ccgccgtaat cgcccaccaa attgagcggc ggtgtcggct tttgcccctt ccgtccgatc
       61 gcatgcaacg ccccggtcag cgcgatgtag ttcaggtcat ggccggcggc atgcgcgagc
      121 gggccaacct gaccccaacc ggtgacccgg ccataagcga gcttcggatt gcgctgcaga
      181 cagacatccg gcccaaggcc aagacgctcc atcaccccag gccggaaacc ctcgatcaac
      241 gcgtcggcgc catcgatcag ccgcagtgca agctgcacgg cttccggccg cttcagatcg
      301 aggccgatca ctgctcggct gcgttttgtg aattcatact gctccggcat cggcacgccg
      361 agatcggttg ggccggtccg atcgatgcga atgatcgtcg cccccatatc ggccagcatc
      421 attgccgcca ttggcgctgg gccaatgccg gtgaattcga cgattttcac gccagccaat
      481 ggtcccattt cagcgtcctc cgttatcgtc accattgtcg gccggtagac gaccgtcggc
      541 aacctcagga gcccggtccg gacgtgcctt caaggcggcg cagatgccat tctgatatcg
      601 atacgacacc gatatcgtcg gcttcacgaa gcccgaatgt cggtccccga gagaaggtcg
      661 gccagcccgt gcagggttcg cagccgcaaa tgtgcctgtt caatctctgg acgttcttca
      721 tgcatccatc cccacggccc gcgccgcagg aacaccgcca acatgccggc cgcgcgcgag
      781 gggatgacat cgttgtcaac ccgatcgcca acataggcga tatctcctgc cgccaccccg
      841 gccgcctcga tcacaagctg gaaaaacctg ggatctggct tcgacacgcc ccatccagcc
      901 gaagacgcaa cgaaatccac cggcagattc aggctgtgca acgcctgctc cgcctccttg
      961 ggctgattgc ctgcgatcag aaccttgaaa ccgcgctccc gcaattcggt caggcacgca
     1021 cgggcgtcgg gatacagatc tgacggctcg aatccataac gccatccctg cgccgcacgc
     1081 tgttgccgca ccgtggaaaa atccaggtca ggtcggaaga tttcgaaaac cttccgatgc
     1141 gactggccac gccacatgct gacacccaaa gcggtgaaca gcgtcaggcg cgggacgccg
     1201 agaaaatcgg cccacccgtt ccactccctg gtctcatcga tcagggtctc gccaacgtca
     1261 aagcaaactg cacggatcgg catggttctg gatcacccgg ttatgctgct tttatcagcg
     1321 tgcgccattc ggccacaaca ccacccgcaa tgtctgcaac agaatcacga ggtcgaacag
     1381 gatcgagaag ttcttcacgt aataaaggtc gtagctcaat ttcgaccgcg catcgtcgac
     1441 tgaggcgccg tacgggtagt tcacctgagc ccatccggtc agaccggctt tcaccatatg
     1501 ccgctctcga tacaacggga tttgcgcggc cagttcgtcg acaaacatag gccgctcggg
     1561 tcgcggcccg acgaacgaca tctcgccttt caggatgttg atcaactgcg gaagttcatc
     1621 gatccgcgtg cgccgcaaaa tcgagccgga ccgggtgatc cggttgtcac ctttggctgc
     1681 ccacaccgca ccgtccaact cggcgtcgac acgcatcgtc cgcagtttca gaatctgaaa
     1741 gacatggccg tccaaagtga ccctttcctg ccggtagaac atcggc
//
LOCUS       DATAVD010001907         3767 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2413953, whole genome shotgun sequence.
ACCESSION   DATAVD010001907 DATAVD010000000
VERSION     DATAVD010001907.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3767
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2413953"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1057)
                     /locus_tag="VHX39_36280"
     CDS             complement(<1..1057)
                     /locus_tag="VHX39_36280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEX3996659.1"
                     /translation="MNRIADLSNPDLQALRHGVRAEYDAFRARGLKLDMTRGKPAADQ
                     LDLANDMLAFPGNRDHFTEAGDDARNYGVLQGLPEARALFAPMLGAPADQIFVGDNSS
                     LAVMHDCIVWALLKGVPGSTEPWGKTTPAFICPVPGYDRHFALCEEYGIRMLPVPLTG
                     HGPDMDAVEALAADPSVKGMWCVPRYSNPSGEVYSDETVRRLAAMRTGAPDFRLFWDN
                     AYAVHHLTEKRHEIANILDACSTAGNPDRAFIFGSTSKITLAGAGLAFFASSPANLAW
                     FMARAFKRTIGSDKLNQLRHVRFLKNQAGLMRHMDGHRALLAPKFAAVTAALDNRLTG
                     TGAATWARPDGGYFISLD"
     gene            complement(1071..1244)
                     /locus_tag="VHX39_36285"
     CDS             complement(1071..1244)
                     /locus_tag="VHX39_36285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996660.1"
                     /translation="MRARFMRARLMHARFMHVRFMHVRFMHVRFMHVRFMHVRGAQET
                     GDRHTRFAIDRAP"
     gene            complement(1296..3101)
                     /locus_tag="VHX39_36290"
     CDS             complement(1296..3101)
                     /locus_tag="VHX39_36290"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF025114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEX3996661.1"
                     /translation="MSATQEKAPPVRHQNPNTQAVRVAFDPLRPTEKPQEFYDEIKQK
                     FAEARDLRLSYRPDGRAQYTSELTGELAKYEVDPWVETIKERAPITDTVECLFIGGGF
                     SALLTAARLREKGVESIRIVERGGDVGGTWYWNRYPGAACDVSAYDYMPLLDELGYVP
                     KSFFAKGPEIYAHCQEIANRYNLYELAVFQTTVTATVWDEQAKLWRVTTDRGDTMSAR
                     FVICANGTLSKPKLSKIDGMKAFKGHSFHSSRFDYAYCGADLSNLKDKVVGIIGTGAS
                     AVQIIPRAGRAAKELYVFQRTPSAIAIRDDIPTDPEWAASLQPGWQRERIRKHVESTA
                     PGYGLTEEQKRDLAALPREEKIRRQENQNIEHQMRIHQRVDEIVKDKATAEALKPWYM
                     HRCKRPCYDDEYLPAFNLPNVHLIDTNGQGVTEINERGVVFEGREYPVDVLIYATGFE
                     VQVTGIYNDIRGENGLSLNDKYADGMRTVLGIHSAGYPNLFIMGGYQASFQFNLTFML
                     QTQGQHIAECIKYVRDSNHATIDASQETEEWWVQEVIRHRGKTNRNAECTPGYYNFEG
                     ESNRRQDGNYNGGMKQYCEHMADVQKDLAQHFRFG"
     gene            3265..>3767
                     /locus_tag="VHX39_36295"
     CDS             3265..>3767
                     /locus_tag="VHX39_36295"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3996662.1"
                     /translation="MTDALTLVIRGGLVVDGTGGAPFEADVGISGNRIAAVGRIKARG
                     TEEIDARGMLVTPGFVDPHTHYDAQVMWANHLSPSSGNGVTTALMGNCGVGFAPCKPE
                     QRDMLVRLMEGVEDIPEPVLTEGLPWNWQSFPEYLDRLDARRFDMDIAAQVPHAALRV
                     FVMGERGA"
BASE COUNT          625 a         1206 c         1218 g          718 t
ORIGIN      
        1 cgtccaggct gatgaagtag ccaccgtccg gcctggccca ggtcgccgcg ccggtgccgg
       61 tgagacgatt gtccagcgcg gcggtcacgg cggcgaactt cggcgccagc agcgcccggt
      121 ggccgtccat gtgccgcatc agcccggcct ggttcttcag gaaccgcacg tggcggagct
      181 ggttcagctt gtcggacccg atcgtccgct tgaacgcacg cgccatgaac caggccaggt
      241 tggcgggcga cgaggcaaag aacgccagcc ccgctccggc cagggtaatc ttcgacgtcg
      301 acccgaagat gaacgcccga tccgggttcc ccgccgtcga gcaggcatcg aggatgttgg
      361 cgatctcgtg ccgcttctcc gtcagatgat gaacggcgta ggcgttgtcc cagaacagcc
      421 ggaaatccgg cgcgccggtg cgcatcgcgg ccagccggcg gacggtctca tcggaataca
      481 cctcgccact ggggttggag tatctcggca cgcaccacat gcctttcacc gacgggtcgg
      541 cggccagggc ttccaccgcg tccatatccg gaccgtggcc ggtcagcggg accggcagca
      601 tgcggatgcc gtattcctcg cacagggcga agtggcggtc gtagccggga accgggcaga
      661 tgaaggcggg ggtcgtcttg ccccacggtt cagtcgatcc cgggacaccc ttcagcagcg
      721 cccagacgat gcagtcgtgc atcaccgcca ggctggaatt gtcgccgacg aagatctggt
      781 ccgccggcgc acccagcatc ggggcgaaca gggcgcgggc ttccgggaga ccttgcagca
      841 cgccgtagtt gcgggcgtcg tcaccggcct cggtgaagtg gtcgcggttg ccggggaagg
      901 ccagcatatc gttggccaga tcgagctggt ccgccgccgg cttcccccgc gtcatgtcca
      961 gtttcagccc acgcgcccgg aaggcgtcgt attcggcgcg cacgccgtgg cgcagcgcct
     1021 ggaggtcggg attcgaaaga tcggcaattc ggttcatggg gtcctcggca tcatggcgcg
     1081 cggtctatcg cgaaacgggt gtgccggtca ccggtttcct gcgcgccccg gacatgcatg
     1141 aagcggacat gcataaagcg gacatgcatg aagcggacat gcataaagcg gacatgcatg
     1201 aagcgggcat gcatcaagcg ggcacgcatg aagcgggcac gcatgatgcg ggacgagatc
     1261 gcccgggccc ccagggtccg ggcggtccgc gtccttcagc cgaagcggaa gtgctgcgcc
     1321 agatccttct gcacgtcggc catatgctcg cagtactgct tcatgccgcc attgtagttg
     1381 ccatcctggc ggcggttcga ttcaccctca aaattgtagt agccaggcgt gcattccgcg
     1441 ttccggttgg tcttgccgcg gtggcggatc acctcctgca cccaccattc ctcggtctcc
     1501 tgcgacgcat cgatcgtcgc atggttactg tcacggacgt atttgatgca ctcggcgatg
     1561 tgctggccct gggtctgcag catgaacgtc aggttgaact ggaacgaggc ctggtagccg
     1621 cccatgataa acaggttcgg ataccccgcc gagtggatgc ccagcacggt gcgcatgccg
     1681 tcggcatact tgtcattgag gctcaggccg ttctcgccgc ggatatcgtt gtagatgccg
     1741 gtcacctgga cctcgaaccc ggtggcgtag atcagcacgt cgaccggata ttcgcggcct
     1801 tcgaacacca cgccgcgctc gttgatctcg gtgacgccct ggccgttggt gtcgatcaga
     1861 tggacgttcg gcagattgaa ggccggcaga tattcgtcgt cgtagcaggg ccgcttgcag
     1921 cggtgcatgt accagggctt cagcgcctcg gcggtggcct tgtccttgac gatttcatcg
     1981 acgcgctggt ggatgcgcat ctggtgctcg atgttctggt tttcctgccg gcggattttc
     2041 tcctcccgag gcaaggctgc cagatcgcgc ttctgctcct cggtcaggcc gtagcccggg
     2101 gcggtgcttt cgacatgctt gcggatgcgc tcccgctgcc agccgggctg cagcgatgcc
     2161 gcccattcgg gatcggtcgg gatgtcgtca cgaatggcga tcgccgatgg cgtgcgctgg
     2221 aaaacataca gttccttcgc ggcgcgtccg gcgcgcggaa tgatctgcac ggcggaggcg
     2281 ccggtgccga tgatgccgac caccttgtcc ttcaggttcg acagatccgc gccgcaatag
     2341 gcgtagtcga agcgggaact gtggaacgaa tggcccttga acgccttcat gccatcgatc
     2401 ttcgacagtt tcggcttgga cagcgtgccg ttggcgcaga tcacgaatcg cgccgacatg
     2461 gtgtcgccgc gatcggtggt gacgcgccac agctttgcct gttcgtccca gaccgtcgcg
     2521 gtgacggtgg tctggaacac tgccaactca tacagattgt atcggttggc gatttcctgg
     2581 cagtgcgcgt agatctccgg ccccttggcg aagaagcttt tcggcacgta gcccaattcg
     2641 tccagcagcg gcatgtagtc gtaagccgac acgtcgcagg cggcaccggg atagcggttc
     2701 cagtaccacg tcccgccgac atcgccgccg cgttcgacga tgcggatgct ctcgacaccc
     2761 ttttcccgca accgagcggc ggtcagcagc gcggaaaacc cgccgccgat gaacaggcat
     2821 tccaccgtat cggtgatcgg ggcgcgttcc ttgatggtct cgacccaggg atcgacctca
     2881 tatttcgcca gctcaccggt cagctccgag gtgtactgcg cacgcccgtc cggccggtag
     2941 ctgagccgca gatcgcgcgc ctcggcgaat ttctgcttga tctcgtcata gaattcctgc
     3001 ggcttctcgg tcggccgcaa cggatcgaaa gcgacgcgca ccgcctgggt gttcgggttc
     3061 tggtggcgga ccggcggcgc tttctcctgg gtcgctgaca ttctctcttc cttctttcca
     3121 gcttcttcgt ccacgtatcc ggaccatgct ggcacaggtt cccgaaactc ggccagcccc
     3181 acggctgccc catcccctgg cagcgcgctt tcagtcgcga cgaaaatgct ggtagcctcc
     3241 tatcacccgg aggagacaaa catcatgacg gacgctctga cgctggtcat tcgcggcggc
     3301 ctggttgtcg atgggacagg cggcgcaccg tttgaagccg atgtcggcat cagcggaaac
     3361 cgcattgccg cggtgggacg gatcaaggcg cgcggcaccg aggaaatcga cgcccgcggc
     3421 atgctggtca cgcccggttt cgttgaccca cacacccact acgacgcgca ggtcatgtgg
     3481 gcgaaccatc tctctcccag ttccggcaac ggtgtcacca cggcgctgat gggcaattgc
     3541 ggcgtcgggt tcgccccttg caagcccgaa cagcgcgaca tgctggtgcg cctgatggag
     3601 ggtgtggaag acatccccga acccgtgctg accgagggcc tgccgtggaa ctggcagagt
     3661 tttccggaat acctcgatcg gctcgacgcc cgtcgtttcg acatggatat cgccgcccag
     3721 gtgccgcacg ccgcgctgcg cgtgttcgtg atgggtgagc gcggcgc
//
LOCUS       DATAVD010001908         4107 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3719744, whole genome shotgun sequence.
ACCESSION   DATAVD010001908 DATAVD010000000
VERSION     DATAVD010001908.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4107
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3719744"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..980)
                     /locus_tag="VHX39_36300"
     CDS             complement(<1..980)
                     /locus_tag="VHX39_36300"
                     /inference="COORDINATES: protein motif:HMM:NF020390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1800 domain-containing protein"
                     /protein_id="HEX3996663.1"
                     /translation="MAHQDDIGLMAHLMRRAGFGASRDELETRVAKGYEATVEELLNP
                     ESQPPVDPYTLLRHQPAALLPGGQPPMGNVNYMYYLVNTQRPLQEKMALFWHHVFATG
                     NSKVDNYDQLLEQIVMFREDGMGNYRDLLLKIAKNPTMIFWLDNNQNHGTAVNENWGR
                     ELLELFSLGAGNYTEVDVRECSRAFTGWTFETKIPRLPYGRFPWKFEYRPEDHDDGLK
                     TFLGHTGNFNGEDIIDIIVTQPACAKFICRHLYNFFVADEPQVPAWPIEAPRNPEAVA
                     EMAAIFRASKCDIKPVLRHVFNAEWFKNARYKHLKSPAEVVVGTLRLVGG"
     gene            complement(997..1446)
                     /locus_tag="VHX39_36305"
     CDS             complement(997..1446)
                     /locus_tag="VHX39_36305"
                     /inference="COORDINATES: protein motif:HMM:NF013494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HEX3996664.1"
                     /translation="MTEQLVEQTCVPCRGGIPPLSQDEARPLLQQTPEWALLDDGKLL
                     QRTFRFANFRASLDFVRDAGELAEAERHHPDISFGWGYATISLRTKKIKGLHQNDFIM
                     AAKLDRLARASGAQDPHGEQPRGSRAPVTSETNPSNPGTGSTLAYHR"
     gene            2190..3137
                     /locus_tag="VHX39_36310"
     CDS             2190..3137
                     /locus_tag="VHX39_36310"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogen peroxide-inducible genes activator"
                     /protein_id="HEX3996665.1"
                     /translation="MTLSELRYLVAVADLRHFGHAAERCHITQSTLSTQLRKLEDFLG
                     VTLFERTSRPVTVTPIGESIVLRARRIIEEIDQICDLARQDEGLLSSTLKLGIIPTLS
                     PYLLPLFLDPLHRAHPQLHILLREDLTANLVEALAAYEVDVLLMALGDDVPGLHAMPL
                     FDEPFWVAFPAGDPLGERNAITDQDLAGRRLLLLAEGHCLRDQALAVCGQEARKNRAA
                     PDVLRANSLETICAMVAAGLGCTLLPALAVPRLTASGSGVEARPFTAAGAARRIGLLW
                     RTASPRREDLMALGKFIQERLPPDVQPPGRPAPMVEAVN"
     gene            complement(3173..>4107)
                     /locus_tag="VHX39_36315"
     CDS             complement(3173..>4107)
                     /locus_tag="VHX39_36315"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEX3996666.1"
                     /translation="KGGDLAMAKQIDRWAPELDRIVATSETIHELADGFGGAHGPAEG
                     PLWWHEGRYLLFSDIHNNKRMKYAPGGGVSLHQEPTNRANGLTRDMQGRLVACEHDSR
                     RVTRQEADGSITVIANSFQGRPLNRPNDVVVKSDGCIYFTDPWTSPAAPQQWDLQYSG
                     VYRVTPDLGTMSLLTDDFVLPNGLAFSPDESVLYINDSRRGHIRAFDLMPSGMLAKQT
                     DRVFADLRGDEPGVPDGMKVDVEGDVYCGGSGGLWIFDPNGKKLGRIAHGATATTNLA
                     FGGDDWKTLYFTSRNHLGAVNVKISGLPVPARRL"
BASE COUNT          698 a         1288 c         1265 g          856 t
ORIGIN      
        1 tagccaccga ccaggcggag cgtgccgacc acgacctcgg ccggggattt caggtgcttg
       61 tagcgggcgt tcttgaacca ctcggcgttg aacacgtggc gcaacaccgg cttgatgtcg
      121 cacttcgacg cgcggaaaat ggcagccatt tcggcgaccg cttccggatt gcgcggcgcc
      181 tcgatcggcc acgccggcac ctgcggctca tcggcgacga agaagttgta cagatgccgg
      241 cagatgaact tcgcgcaggc cggctgcgtc acgatgatgt cgatgatgtc ttcgccgttg
      301 aagttgccgg tgtgacccag gaaggtcttc aatccgtcgt cgtggtcttc cgggcgatac
      361 tcgaacttcc aggggaaccg tccatagggc aggcgcggga tcttggtctc aaaggtccag
      421 ccggtgaagg cgcgcgagca ttcgcgcacg tcgacctcgg tgtagttgcc ggcgccgagg
      481 ctgaacagct cgagcagttc gcggccccag ttctcgttca ccgcggtgcc gtggttctgg
      541 ttgttgtcca gccagaagat catcgtcggg tttttcgcga tcttcagcag caggtcgcgg
      601 tagttgccca tgccgtcctc gcggaacatt acgatctgct cgagcagctg atcgtaattg
      661 tcgaccttcg agttgccggt cgcgaacaca tggtgccaga acagcgccat tttctcctgc
      721 agcgggcgct gcgtgttcac caggtagtac atgtagttaa cgttgcccat cggcggctgg
      781 ccgccgggca gcagagccgc cggctgatga cgcagcagcg tatagggatc gaccgggggc
      841 tgagattcgg ggttcagcag ctcctccacg gtcgcttcgt accccttggc gacgcgggtc
      901 tcgagttcgt cgcggctggc gccgaagcct gcacgccgca tcaggtgtgc catcaaaccg
      961 atatcgtctt ggtgagccat ggtcgtgcct ccttacttac ctgtgataag ccaatgtcga
     1021 accagtgccg gggttcgacg gatttgtctc actcgtcacc ggcgcccttg atccgcgcgg
     1081 ctgttcgccg tgtgggtcct gagcaccgct cgctcgtgca aggcggtcga gttttgccgc
     1141 catgatgaag tcgttctggt gcagaccttt gatctttttc gtccgcagcg agatcgtggc
     1201 gtaaccccaa ccgaaactga tgtcgggatg gtgacgttcg gcttcggcga gttcgccggc
     1261 gtcgcgaaca aaatccaaag acgcccggaa gttggcaaaa cggaacgtgc gttgcagcag
     1321 cttgccgtca tccaatagcg cccactcggg ggtttgttgc agcaatggcc gagcctcgtc
     1381 ctggctcagc ggcgggatgc cgccacggca aggaacacag gtttgctcaa ccaactgttc
     1441 tgtcattcgc atcccggtgg aatcatcgat tcctcatgct gtcatctcat gttgtcgagg
     1501 gcacgccgca tctcgcctgc gtgtgatcgg ccgactttgg ccatggttgc gaaccaaccg
     1561 gctgtttcct cgaagccatc gtcttgcgcc gtgcgagcct ttccggcacg cgtggcgata
     1621 tggtcatctg tcatcgccgc gcctgtagtg gccagttcgc ctgccgttct ttatcaactg
     1681 ccccgatgtg tcgtagcccg cgatcaggaa gtcaagatgg cccgccctca gccggagcgg
     1741 ggttgctctc tcatggcggg ggtcggtgac gatcccccgg gtgcagctcg gggaaagccg
     1801 gctcaatcga cgggcgcctg agagcgcatg tctcagactc tggtcggtcc ggctgccttt
     1861 gagcaaggcc atggcaatca ctccctcgtg cggcgggcga cctggtcgca ttcctttgcc
     1921 gcgaacgatt attgcttttt tccagtcacg gtgaacgatc ttcacgctct cgaacgatgc
     1981 tcgccagtgt gtcgggctgt cgctgatcac cggtggtaaa acgccttaca gccgctggcg
     2041 gcggcctggc gtcccccgga tggtgcgcat cgaccaacct cggtgtggca actctgcacc
     2101 catttgccca tttgtctaat ccataatata aatgaggttg atcgatggcg tccatgaaag
     2161 tggggcgtcc atgaaagtgg gagaagccaa tgacgctctc cgagctgcgg tacctcgtcg
     2221 ccgtggccga cctccgtcac ttcggccatg ccgcggagcg gtgccacatt acccagtcca
     2281 cgctcagcac gcagctccgc aagctggagg attttctggg cgtcacgttg ttcgagcgca
     2341 ccagccgacc ggtcacggtc actccgatcg gcgaaagtat cgtgctccgc gcccgccgga
     2401 tcattgagga aatcgaccag atttgcgatc tggcccggca agacgaaggc ctgctgtcga
     2461 gcaccctcaa actgggcatt atcccaaccc tgagcccgta tctgttgccg ctgttcctcg
     2521 atccgctgca ccgcgcccat ccgcagctgc acatcctgct gcgcgaggac ctgaccgcca
     2581 atctggtcga ggccctggca gcctatgagg tcgacgtcct gctgatggcg ttgggggacg
     2641 acgtgccagg cctgcacgcc atgccgctgt tcgacgaacc gttctgggtt gcctttccgg
     2701 ccggtgatcc gcttggcgaa cgcaacgcca tcaccgatca ggatttggcc ggaaggcggc
     2761 tgttgctgtt ggcggagggg cattgtctgc gcgaccaggc acttgcggtg tgcggccagg
     2821 aagcccggaa aaaccgtgcg gcgccggatg tgttgcgggc gaacagcctg gaaacgattt
     2881 gtgcgatggt cgcagcaggt ctcggctgca cgctgctgcc ggcgcttgcg gttccgcggc
     2941 tgaccgcgag cggatctggc gtggaggcgc ggccgttcac tgccgccggg gcggcgcgac
     3001 ggatcggcct gctgtggcgc accgcatcgc cgcgacgcga ggacctgatg gctctgggca
     3061 aattcattca ggagcgcctg ccaccggacg tacagcctcc tggcaggccc gcgccgatgg
     3121 ttgaggcggt gaactgattt aagtttgcac cgcctcaacc ggggaacgat cgctatagcc
     3181 gccttgccgg caccgggagt cccgaaatct tcacattcac cgcgcccaga tggttacggc
     3241 tggtgaaata cagtgtcttc cagtcatcac caccgaacgc cagattggtg gtggccgtcg
     3301 caccatgcgc gatgcgcccg agtttcttgc cgttcgggtc gaaaatccac aacccgcccg
     3361 agccgccgca atacacgtcg ccctcgacgt cgactttcat gccatcaggt acacccggct
     3421 catcaccgcg caaatcagca aacacccggt cggtttgttt cgccagcatg ccgctcggca
     3481 tcaaatcaaa cgcccgtatg tgaccgcgcc gggaatcgtt gatgtacagc acactttcat
     3541 ccggcgagaa tgcgaggccg ttcggcaata cgaaatcgtc agtcagcagc gacatcgttc
     3601 cgagatccgg agtcacccgg tagacgccgg agtactgcag atcccactgt tgcggtgccg
     3661 ccgggctggt ccacgggtcg gtgaaataaa tgcagccatc ggacttcacc accacgtcat
     3721 tgggccgatt gagtggtcgc ccctgaaaac tgttcgcgat cacggtgatg ctgccgtcgg
     3781 cctcctgccg tgtcacgcgc cgtgagtcat gctcgcaggc gaccaggcgg ccctgcatgt
     3841 cgcgggtcag tccgttggcc cggttggtcg gttcctggtg taacgacacc ccgccgccgg
     3901 gcgcatattt cattcgtttg ttgttgtgaa tgtcgctgaa cagcagatag cggccctcgt
     3961 gccaccacag cggtccttcc gccggtccgt gcgcgccgcc aaacccatcc gccagttcgt
     4021 ggatggtttc cgatgtcgcg acgatccggt cgagctcagg cgcccatcgg tcgatttgtt
     4081 ttgccatggc caggtctccc ccttttg
//
LOCUS       DATAVD010001909         5071 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2414249, whole genome shotgun sequence.
ACCESSION   DATAVD010001909 DATAVD010000000
VERSION     DATAVD010001909.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5071
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2414249"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..697
                     /locus_tag="VHX39_36320"
     CDS             <1..697
                     /locus_tag="VHX39_36320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996667.1"
                     /translation="LIPQFLTTVQNFRAIEVGGVLMWIALPQFLLAPIVGTLLRFVEP
                     RIPLALGFALVGCGCFMAGQLTQVWAGDDFLPSQLVQAVGQSIGLTSLVWFFLHHLEP
                     SEVLTFGAILQTGRLFGSELGAGFIQTFVRVQEQVYSNLIGQHVTVGSIYTVQRLQDY
                     AGAVIARSVGQTGANARATVLLADAVRTQANVLAYIDGFMVIGFAAIGVLLLMLVLRE
                     PPGLPFSAAVRPK"
     gene            complement(920..1612)
                     /locus_tag="VHX39_36325"
     CDS             complement(920..1612)
                     /locus_tag="VHX39_36325"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3996668.1"
                     /translation="MEPVVAVVIPTLNEASAIATVIRELPRDLVRQIIVADSGSTDGT
                     AAIARASGATVLETGRGYGRACAAGVAAADPACTVIVFLDGDGADRGDLLRQIAGPVL
                     AGEQDLVLASRTRGKREPGSMNWHQVLAGHLAGFGIGALYGVRYSDMCAFRAIRRDAL
                     TQLDMRELTYGWNIEMQMKAARARFRILEVPMPYRCRLGGESKVAGSLRGTIRAASRI
                     SSTFLRVAMARG"
     gene            complement(1600..2652)
                     /locus_tag="VHX39_36330"
     CDS             complement(1600..2652)
                     /locus_tag="VHX39_36330"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEX3996669.1"
                     /translation="MSAATLKDPRRYFEEVSAERSSEAESPPVCLYLEVTNRCNLLCD
                     TCPRTFEELEPPADMSWALFTRIVDQVPNIARVVLHGVGEPMLVRDLPRMIRYLKDRG
                     TYVLFNTNGTLLQPKKFQALIDTGLDELRVSLDAADRASYLRVRGKDFFNRIVRDVGK
                     FVAFQNDIGATTPRVSLWLTGLKETVEQLPAFVRLAAAMGVREVHLQRLVFDEAGYGL
                     ARPEFSLFEQTRADESTAIEAAQALGAELGVTLDASGATEPGLSLKRQPGDRPWATCR
                     RPWSLMYFTAHGRALPCCIAPFSARGYETYTLGDASQDTLREIWNGPAYQDFRTSLLG
                     DAPPAPCQNCGLRWSL"
     gene            complement(2694..4040)
                     /locus_tag="VHX39_36335"
     CDS             complement(2694..4040)
                     /locus_tag="VHX39_36335"
                     /inference="COORDINATES: protein motif:HMM:NF021134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase 87 family protein"
                     /protein_id="HEX3996670.1"
                     /translation="MKRLAALGLAIVGLTLFALVQLWPWQQAEGSAQVVPPLVAVLAV
                     TALVYLAAVGLVLRHTLPPQAIWIVLIVAVAIRLPVLFTPPILSSDIYRYIWDGRVQV
                     AGINPYLLLPADPALADLRDAAIYPHINRADYAHTIYPPTAQLVFAAIARVAQSVFAE
                     KACMLGFEAVAIFCALRLLKLARLPPERVLIYAWNPVPVWAFACDGHLDAIGIALLAG
                     ALLLRCLKRDGIAGVVFGAAVLVKFLPAVVAPALWRRGAGWRLALAATATIVALYACY
                     AGAGRQLLGFLPGYGVEEGIDSGNGIWLLAGLQHLVALPSTAVPIYLGFALLALAGVV
                     CWSMTRPRPRPGTSEDVAMICGQAAVLAGSVTVIISPHYAWYFAWLALPVVVRPYWSV
                     IWLATAPVVLYHDPFNDPFYWRSVVYVPAALLALSDIRGTRYGQPGMIPASLTQVR"
     gene            complement(4037..4810)
                     /locus_tag="VHX39_36340"
     CDS             complement(4037..4810)
                     /locus_tag="VHX39_36340"
                     /inference="COORDINATES: protein motif:HMM:NF021365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04282 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HEX3996671.1"
                     /translation="MQFERSCAIGVMAKAPQAGRSKTRLCPPLLPDQAAALSAAFLRD
                     TTENIAATARTAPVRGFVAYAPAGSVSLFDGNVADGTGFVLADGISGFPGPMPADVLG
                     FGRCLLHAVQGMLTQGFAAACVLNSDSPTLPGQILATAAQALLQAGDRVVLGAAEDGG
                     YYLLGMKRLHARLFADIAWSTDGVADATRARAGELGLEVVELPLWYDVDDRASLTRLL
                     HEISGLDQAGPLDPWPAPATAAALRRIGLYAPEQLRAAE"
     gene            complement(4814..>5071)
                     /locus_tag="VHX39_36345"
     CDS             complement(4814..>5071)
                     /locus_tag="VHX39_36345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEX3996672.1"
                     /translation="KYVGFECADGYYEGIDMPTALHPQTIMAFSLSDQTLPQKYGYPF
                     KIRIPTKLGFKNPKFVTTIYVTNKQPRGFWTDRGYNWFSGI"
BASE COUNT          986 a         1604 c         1598 g          883 t
ORIGIN      
        1 tctgatcccg cagtttctga cgacagtgca gaatttccgt gcgatcgagg tcggaggcgt
       61 gctgatgtgg atcgcattgc cgcagttcct gctggcgcca atcgtcggga ctctcctgcg
      121 cttcgtcgag ccgcgaatac cgttagccct gggctttgcg ctggtcggct gcggctgctt
      181 catggccggg caactcaccc aggtctgggc tggcgatgac ttcctgccgt cacagcttgt
      241 tcaggcggtg ggccagtcaa tcggcctgac gtcgctggtg tggtttttcc tgcatcacct
      301 ggagccaagt gaagtgctca cgttcggtgc aatcctgcag accgggcggc tgttcggatc
      361 ggaactcggg gccggtttca ttcagacctt cgttcgcgtg caagaacagg tttactcgaa
      421 cctgatcggg caacacgtca cggtcggttc aatttacaca gtccagcgtc tgcaggatta
      481 tgccggggcg gtgatcgctc gctcggtcgg ccagaccgga gccaacgcac gcgccactgt
      541 gttgctggcc gacgccgtgc gaacccaggc caacgtgttg gcgtatatcg atggcttcat
      601 ggtgatcgga tttgccgcaa tcggtgtgct gctgctgatg ctggttttgc gcgagccccc
      661 gggcctgcca ttttcggctg cggtacggcc gaaatgatgt gctggcgtgc gctcgaagtg
      721 cccggtctga ctgcacatat cgaacgcaac acgcaacgtt ctcaacgcat ccgcgaatgc
      781 gccgcgctcg accatcacct tgccttcgag gaagtgttta ttgcagcata tcgaccgagc
      841 ttcggaaagc ctgcggcttg ccgtcccgtt ggcttcgcgg aagcgcccgc ggcgcggaat
      901 gaaccggcgg taccgtcact cagccgcgtg ccatggcgac gcgaaggaac gtcgaactga
      961 tccgcgacgc cgcgcgtatt gtaccgcgca atgatccggc gaccttggac tcgccgccca
     1021 gacggcagcg gtagggcatg ggaacctcca ggatacgaaa ccgtgctcga gcggccttca
     1081 tctgcatttc gatgttccag ccataggtca gttcccgcat atcgagctga gtcagcgcat
     1141 ccctgcggat cgctcgaaaa gcgcacatgt cgctgtacct aactccatat aacgcgccga
     1201 tcccgaagcc ggcgaggtgg cccgccaaca cctgatgcca gttcatcgag ccaggttctc
     1261 gtttcccgcg cgtgcgtgac gccagcacca gatcctgctc ccccgcgagc accggaccag
     1321 caatttgccg tagcagatca ccgcggtcgg cgccgtcgcc gtccagaaac acgatgaccg
     1381 tgcaggccgg atcggccgcc gcgacacctg ccgcacaggc gcgtccgtag ccgcgaccgg
     1441 tttccaatac ggtcgctccg gacgctcgtg cgattgccgc cgttccgtcg gtgctgccgc
     1501 tgtcagcaac aatgatctgg cgcaccagat cgcgcggcaa ctcgcggatg accgtggcga
     1561 tcgccgaggc ctcgttcaag gtcggaataa cgacggcgac tacaggctcc atcgcaatcc
     1621 gcagttctga cacggtgccg gtggcgcatc acccagcagg ctcgtgcgaa agtcttgata
     1681 agcgggaccg ttccagattt cccgcaacgt gtcctgcgac gcgtcgccaa gcgtgtaggt
     1741 ctcgtagcct cgcgccgaga agggcgcgat gcagcagggc agcgcccgac cgtgcgcggt
     1801 gaaatacatc agcgaccagg gccgccggca ggtagcccag ggacggtcgc caggctggcg
     1861 cttgaggctg aggccaggtt cagtggcacc ggatgcgtcc agcgttacgc caagttcggc
     1921 tccgagcgcc tgagctgcct caatggccgt gctctcgtcg gcccgggttt gttcgaatag
     1981 cgagaattcc ggacgggcca gaccatagcc tgcctcatcg aacacaaggc gctgcaggtg
     2041 gacctcacgc acgcccattg ccgccgccag acgcacgaag gcaggcagtt gttcgaccgt
     2101 ctccttcagg ccggtgagcc agagcgatac ccgtggcgtt gtggcgccga tatcgttttg
     2161 aaaggcgaca aattttccga cgtcgcgcac gatccggttg aagaagtcct tgccgcgaac
     2221 ccgcagatag ctggctcggt cggcggcatc gagggagacg cgcaactcat ccaacccggt
     2281 gtcgatcagc gcctggaact tctttggctg tagtaatgtg ccgttggtat tgaacagcac
     2341 gtaggtgccg cgatccttga ggtagcggat catgcggggc aggtctcgca caagcatcgg
     2401 ctcgcccacg ccatgcagca cgacgcgggc gatgttgggg acctgatcga cgatgcgggt
     2461 aaacagggcc caactcatgt ccgcgggcgg ctcgagttct tcgaacgtgc gaggacatgt
     2521 gtcgcacagc aggttgcacc gattggtgac ctcgagatac aggcagaccg gtggagattc
     2581 ggcctccgac gatcgttcgg ccgatacttc ctcgaaataa cgccgcgggt ccttgagcgt
     2641 ggctgccgac atcagcgcat acctttcatc gaactttggt catcgaactt tggtcatcga
     2701 acctgggtca gcgaagctgg gatcattccg ggctggccgt accgggtgcc gcgaatatcg
     2761 cttagcgcca gcagcgctgc cggcacgtag accaccgatc gccagtaaaa tggatcgttg
     2821 aacgggtcat ggtaaagcac caccggtgcc gtcgcgagcc atatgaccga ccaatatggc
     2881 cgcaccacga cgggcagagc aagccaggcg aaataccacg cgtaatgcgg actgatgatg
     2941 acagtgacac tgcctgccag taccgccgcc tgaccgcaaa tcatggctac gtcctccgac
     3001 gtaccgggcc ggggacgcgg acgcgtcatc gaccaacata cgacgccggc cagcgccagc
     3061 agagcaaagc ccagataaat tggaaccgcg gtactgggca gcgccacgag atgttgcagg
     3121 ccggccagta gccaaatgcc gttgccgctg tcgatgcctt cctcgacccc gtagccgggc
     3181 aggaaaccaa gaagctgccg tcccgcgccg gcgtaacacg catacagtgc cacgatcgtt
     3241 gcggttgcgg ccagagccag acgccacccg gcgccgcgcc gccacagcgc cggggcgacg
     3301 acggccggca ggaatttcac cagcaccgcg gcaccgaaca cgacgcccgc gatgccatcg
     3361 cgtttcaggc accgcagcag caacgcaccg gcgagcaaag cgataccgat cgcatccaaa
     3421 tggccgtcac aggcgaaagc ccagaccggc accggattcc aggcgtaaat cagcacgcgc
     3481 tccggcggga gacgcgccag cttcagcaga cgcagcgcgc aaaaaatcgc caccgcttcg
     3541 aagccgagca tgcaggcttt ttcggcaaat acgctttgcg ccacccgagc gatcgcggcg
     3601 aaaaccagct gtgccgtggg cgggtagatc gtatgggcat agtcggctcg gttgatgtgc
     3661 ggataaatcg cggcgtcgcg caaatctgcc agcgccggat cggcgggcag caacaaatac
     3721 gggttgatgc cggcgacctg gacccggcca tcccagatgt agcgatagat gtcgcttgaa
     3781 aggatcggcg gcgtgaacag caccggcagg cgtattgcca cggcaacgat cagcacgatc
     3841 cagatcgcct gcggcggcaa agtgtgccgc aacaccaggc caaccgcggc gagataaacc
     3901 agcgcggtca ccgcaaggac cgcaaccaag ggcggcacaa cctgggccga accctcggct
     3961 tgctgccagg gccaaagttg caccagggcg aacagcgtca aaccgactat cgccaggccc
     4021 agagcggcga gacgtttcat tcggcagccc ggagttgctc cggtgcgtat aggccgatgc
     4081 gacgcaacgc cgctgccgtc gcgggagccg gccaggggtc cagggggccg gcctggtcca
     4141 gcccagatat ctcgtgcagc aggcgggtaa gggatgcgcg gtcatcgacg tcgtaccaga
     4201 gcggaagctc aacgacctcc agcccgagtt cgcccgccct cgcccgtgtc gcatcggcaa
     4261 cgccgtccgt gctccaggcg atgtcggcga atagcctcgc gtgcagtcgt ttcattccaa
     4321 gtaggtaata tccgccgtct tccgccgcgc cgaggacgac gcggtcgccg gcttgcagca
     4381 gggcctgcgc ggcagtggcc aggatctgtc ccggcaacgt cggactgtcg gagttcaaca
     4441 cgcaggcggc ggcgaagcct tgtgtcagca tcccctggac ggcgtgcagc aggcatcggc
     4501 caaagcccag tacgtccgcc ggcatgggac ccggaaagcc ggatatgccg tcggccagca
     4561 cgaacccggt gccgtcggcg acattgccgt caaacaaact taccgatccg gcgggagcat
     4621 aagcgacaaa gccccgtaca ggtgcggtgc gagcggtggc agcgatattc tcggtcgtgt
     4681 cgcgcaggaa cgccgcgctg agagcggcag cctggtcggg cagcaagggc gggcacagcc
     4741 tggtctttga ccggcccgcc tggggtgcct tggccatcac cccgatggcg caacttcgct
     4801 cgaactgcac ggttcaaatc ccactgaacc aattgtagcc gcggtcagtc cagaagccac
     4861 gcggctgttt attggtgacg tatatcgtcg tgacaaattt cgggttcttg aagccaagtt
     4921 tggtggggat gcggattttg aacgggtagc cgtatttctg cggcaaggtc tgatcggaca
     4981 ggctgaacgc catgatggtt tgcggatgca aggcggtggg catgtcgatc ccttcgtaat
     5041 agccgtcggc gcactcgaac ccgacatatt t
//
LOCUS       DATAVD010001910         6061 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2604595, whole genome shotgun sequence.
ACCESSION   DATAVD010001910 DATAVD010000000
VERSION     DATAVD010001910.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6061
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2604595"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..906)
                     /locus_tag="VHX39_36350"
     CDS             complement(<1..906)
                     /locus_tag="VHX39_36350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014242232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent catabolism-associated
                     beta-propeller protein"
                     /protein_id="HEX3996673.1"
                     /translation="MRRRDWRWAWISFLMGALTSAPAGAYTAYVTNERDNTVSVVDLD
                     KMATVKTVPVGQRPRGIAITADGSQILVCTSDDDTIQIIDSKTLKIVGDLPSGPDPET
                     FALRASGTPLYVSNEDDSLVTVIDVPSRKVIAEIPTGLEPEGMAVSPDGQTIVNTSET
                     TNMAHFIDYASRKMVASVLVDARPRVAMFKHDGSEVWVSSELGGTVSVIAPARHAVTH
                     KISFDVQGLRAETIQPVGIQFTHDDAIAFVALGPANRVAVLDAKTYKVRQYLLVGQRV
                     WQMAFTPDEKYLLTTNGLTNDISVIE"
     gene            1129..1335
                     /locus_tag="VHX39_36355"
     CDS             1129..1335
                     /locus_tag="VHX39_36355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996674.1"
                     /translation="MVDLILLACTLGQPSACHEHHLLFQTAGTLQGCVFQAQPYLAQW
                     AGEHPGLRVARWRCAWPDQEEEKG"
     gene            1431..1820
                     /locus_tag="VHX39_36360"
     CDS             1431..1820
                     /locus_tag="VHX39_36360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c family protein"
                     /protein_id="HEX3996675.1"
                     /translation="MVRAALIATSLLVVAPVRVLAQDAAAGAKDFLVCRACHQIGPNA
                     KNAVGPVLNGVVGRTAGTFPDYTYSEANKGSGLVWTPEELDKYLTSPQTVVPHTKMIF
                     PGLKDEQKRKDVIAYLSQFALDGQQKQ"
     gene            1873..2982
                     /locus_tag="VHX39_36365"
     CDS             1873..2982
                     /locus_tag="VHX39_36365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase activity,
                     zinc-dependent [Evidence IEA];
                     GO_function: GO:0051903 - S-(hydroxymethyl)glutathione
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006113 - fermentation [Evidence IEA];
                     GO_process: GO:0009404 - toxin metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HEX3996676.1"
                     /translation="MKSRAAVAREAGKPLSLETVDVDGPRAGEVLVEIKATGICHTDE
                     YTLSGADPEGIFPAILGHEGAGVVVEIGAGVTTLRPGDHVIPLYTPECRQCEYCLSRK
                     TNLCVAIRATQGRGVMPDGTSRFTCNGAPVMHYMGTSTFANFTVLPEIALAKIRPDAP
                     FEKVCYIGCGVTTGIGAVMNTAKVEAGARAVVFGLGGIGLNVIQGLRMVGAEMIVGVD
                     LNPNRRAVAEKFGMTHFVTPSDVQGDLVPYLVDLTKGGADYSFECIGNVKVMRQALEC
                     AHRGWGQSIIIGVAGAGQEIATRPFQLVTGRVWKGTAFGGARGRTDVPRIVDWYMEKR
                     INIDDLITHVLPFDRINEGFDLMRRGESIRTVVTY"
     gene            complement(3061..3639)
                     /gene="gfa"
                     /locus_tag="VHX39_36370"
     CDS             complement(3061..3639)
                     /gene="gfa"
                     /locus_tag="VHX39_36370"
                     /EC_number="4.4.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051907 - S-(hydroxymethyl)glutathione
                     synthase activity [Evidence IEA];
                     GO_process: GO:0046292 - formaldehyde metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione synthase"
                     /protein_id="HEX3996677.1"
                     /translation="MSGTVGIHPAVDQGVKPGAANFSGGTLVCKCAQAPVKVTITGQV
                     AYDHACGCTKCWKPNGAVFSVVAVVPRANLTVTENADKLAIVDSSAAIQRYACKGCGV
                     HMYGRIENTKHPFYGFDFVHPELFQESGWAPPEFAAFVSSVIESGVAPDRMAGIRGRL
                     RELGLEPYDALSPPLMDAIATHIAKASGALPA"
     gene            complement(4723..>6061)
                     /locus_tag="VHX39_36375"
     CDS             complement(4723..>6061)
                     /locus_tag="VHX39_36375"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEX3996678.1"
                     /translation="VSEPSFAADPYIRQRQARSLLCLPLINQARLIGVLYLENNLTAG
                     AFAPARIAVLKLLASQAAVALENTRLYRDGIEREAKIRRLVDANIIGIFIWGSEGQIF
                     EANDAFLRMVGHDRDDLVSGRVSWTDLTPPDWRERHEQDWTPELLMTGTVQPYEKEYF
                     RKDGSRLPVLVGAAGFDDGGKQGVSFVLDLTERKRAEADARESERRHREVQTEVAHAS
                     RVATMGQLTASIAHEVNQPIAAMVTNAEAAQLWLDREPPRLAEVRVALTRIVKDGIRA
                     GDVIGRIRELIKKAPPRNDPVDINEAIREVIELTRGEAIKTGVTVQTHLAVGLPLIHG
                     DRVQLQQVMLNLIVNAVEAMGSVSDEQRDLQIDTAEAGRCGVLVVVRDSGPGLAPGTH
                     ERLFEAFYTTKSTGLGMGLSICRSIIEAHGGRLWAEPNEPRGTVFQFLTSAQP"
BASE COUNT         1184 a         1873 c         1824 g         1180 t
ORIGIN      
        1 ctcgatcacc gagatatcgt tggtcagccc attggtggtc agcagatatt tctcatccgg
       61 ggtaaacgcc atctgccaga cgcgctgacc caccagcagg tattgcctca ctttgtaggt
      121 tttcgcatcg agcacggcca cgcggttcgc cggtccaagg gccacgaagg cgatcgcatc
      181 gtcatgcgtg aactggatgc ccaccggctg gatcgtttcg gcacgcaaac cttgcacatc
      241 gaacgatatc ttatgggtca ccgcgtgccg tgccggagcg atcacgctga ccgtcccgcc
      301 aagctcggac gaaacccaga cttccgatcc gtcatgtttg aacatggcga cccgcgggcg
      361 ggcatcgacc agcacgctgg caaccatttt tcgagatgca tagtcgatga aatgcgccat
      421 gttggtcgtc tcggacgtgt tcacgatcgt ttgtccatcc ggactcaccg ccatgccctc
      481 gggttccagg ccggtcggga tttccgcgat caccttgcgc gacggtacgt cgatgacggt
      541 gacgaggctg tcgtcctcat tcgacacata aagcggcgtg cctgaggcac gcaaagcgaa
      601 agtctcggga tccgggccgg atggcaggtc gccaacgatc tttagcgttt tgctatcgat
      661 gatctggatc gtgtcgtcgt cgctggtgca gaccaggatc tggctgccat cagccgtgat
      721 cgcgatgccg cgcgggcgtt gcccgaccgg aaccgtcttc acggtcgcca ttttatccag
      781 atcgaccacg ctgaccgtgt tgtcgcgttc attcgttaca taagcggtat aggcgccggc
      841 cggcgccgag gtcaaagcgc ccatgaggaa gctgatccaa gcccaccgcc aatcgcggcg
      901 cctcatcaag acgccggcag gtgtcgcggt catgggtcgc ctgttacgtg gtctcagacc
      961 tggacgattc attcagggca ggatgaagaa gttctcattc cggttcaagg gtatgaccgc
     1021 gggcgagaca ccgtggaaac gccgcgcctg catgaaaata tggcaattcg tctccggcct
     1081 gtgtatctgc cggcgatccg gcaaccggaa aggcgatgcg ctatgcaaat ggtcgatctc
     1141 atcctgctgg catgcacgct cggccaaccg agcgcctgtc acgaacacca cctgttgttt
     1201 cagaccgcgg ggaccttgca aggctgcgtg ttccaggcgc agccctattt ggcgcaatgg
     1261 gccggcgagc atcccggatt gcgtgttgcc cgatggcgtt gcgcctggcc cgaccaggag
     1321 gaagaaaagg gctaagcggc tgttgacagc ctccgcggtt taccgcgaca tgacaccccg
     1381 tcaaagctcg gcagaaatgg cccgcgctcg ctgcgcccgg aggaaatgac gtggtacgcg
     1441 ctgcactcat cgcaacgtct ctattggtcg tggccccggt ccgcgtgttg gcgcaggacg
     1501 ctgcggccgg cgcgaaggac ttcctggtgt gtcgggcctg ccaccagatc ggaccaaatg
     1561 cgaagaacgc ggttgggccg gtgctgaatg gcgtggtcgg gcgtaccgcc ggcacctttc
     1621 cggactacac ttattcggag gccaacaagg gatctgggct ggtctggacg ccagaggaac
     1681 tcgacaaata cctgacatcg ccgcagactg tcgtgccgca caccaagatg atttttcccg
     1741 gcctgaaaga tgagcagaag cggaaagacg tcattgcata tttgtcacaa ttcgccctcg
     1801 atgggcaaca gaagcaatga ccatgggact gacggcgctg tactgtgact ttgcgaactg
     1861 ggaggtaatg ccatgaaaag tcgtgccgcc gtcgcccgcg aggcgggcaa gccgctcagt
     1921 cttgaaaccg tggatgtcga cggtccgcgc gccggcgaag tgctggttga aatcaaggcg
     1981 accggaattt gccacaccga cgaatacacg ctctccggcg ccgatcctga aggcatcttc
     2041 cccgcaatac tgggccatga gggcgcgggg gtcgtcgtgg aaatcggcgc aggcgtaacg
     2101 acactgaggc cgggcgatca cgtcattccg ctctacacgc cggaatgccg gcagtgcgaa
     2161 tattgcctca gtcgcaagac caatctttgc gttgcgatcc gcgcgacgca ggggcgcggc
     2221 gtcatgccgg acggcaccag ccggttcacc tgcaacggtg cgccggtcat gcactatatg
     2281 ggcacctcga cctttgccaa tttcactgtg ctgccggaaa tcgcactggc gaaaatcagg
     2341 ccggacgcac cgttcgaaaa ggtctgctat atcggctgcg gcgttaccac cgggatcggt
     2401 gcggtgatga acaccgcgaa agtcgaggca ggcgcccgtg cagtcgtctt cggattgggc
     2461 ggtatcggtc tgaacgtaat ccagggcctg cgcatggtcg gtgccgaaat gatcgtcggc
     2521 gtcgacctca atccgaaccg tcgtgccgtg gccgagaaat tcggcatgac ccatttcgtc
     2581 accccgtcgg acgtgcaagg cgatttggtc ccgtatctgg tcgatctgac gaaaggcggc
     2641 gccgactata gtttcgagtg catcggcaat gtgaaagtca tgcgccaggc actggaatgc
     2701 gctcaccgag gctggggcca gtcgatcatc atcggtgtcg ccggagccgg acaggagatc
     2761 gctacgcggc ccttccaact ggtgaccgga cgggtctgga aaggtaccgc gttcggcggc
     2821 gcacgaggcc gcaccgacgt gccgcggatc gtcgattggt acatggaaaa gcgcatcaac
     2881 atcgacgacc tgatcacgca cgttctgccg ttcgaccgta tcaacgaagg cttcgacctg
     2941 atgcggcggg gcgaaagcat ccgcacggtc gtgacctact gatcgttgcg ggtcgtgatg
     3001 gcgcgccgta tcagcccagc gcactgacgc ggccaggctg atacgggccc tcgccggagg
     3061 tcaggcaggc aaagcacctg atgctttcgc gatgtgcgtg gcgattgcgt ccatcaacgg
     3121 cggcgacaga gcgtcgtacg gctcaaggcc aagttccctg agcctgcccc ggatgccggc
     3181 cattctgtca ggtgccactc ccgactcgat caccgacgac acgaaggcag cgaattcggg
     3241 aggcgcccag ccggactcct ggaataattc cggatggacg aaatcgaagc cgtagaaggg
     3301 atgtttggtg ttttcgatgc ggccgtacat atgaacgccg caccctttgc aggcgtaacg
     3361 ttggatcgcc gcactgctgt cgacgatcgc cagcttgtcg gcattttcgg tcacggtcag
     3421 gttggcacgc ggcacgaccg caacgaccga gaagaccgcg ccattgggct tccagcattt
     3481 ggtgcagccg caggcgtggt cgtaagcgac ctgacctgtt atcgtgactt tcactggtgc
     3541 ctgcgcgcac ttgcacacca gcgtgccgcc ggaaaaattc gccgcgcctg gctttacgcc
     3601 ctggtctaca gcaggatgga taccgacagt tcccgacatc tcattctccc catgtatttg
     3661 gttgcgtatt gctcgttacc tggcggcagg agcgaccagg cgctggtcgt atcgccacca
     3721 cgcgaacggt gcgcggcacc tgctattcta tggcaaaggc tcaagccccg ccagagcacc
     3781 gatttgcgcg taaccgtaca caattgccaa ccacgccgac gttccttcgg ccggctcgat
     3841 tatgtcgatt tgttgacagt cgagggtagc tccctcgatg gggcgatccg ctgttccttc
     3901 ttgcgaattc gtttaagcgg actttgagtg ccggaagcct gagcatttgg agcattgatc
     3961 ggcttcgacg gcgggccaat cttacggact ccgcccatca ttttggtaac ataaggctgt
     4021 tggtggagaa ctccgacagc aacgccgccg gcaggaggaa caggttcatg acatgccttc
     4081 ctcgcaactg gttgagcccc ggagagtatc agccacaaca cgagatgcaa agcggcctgc
     4141 ccaaccggtg ccgatgaagc ccggaagttt tgattgagag ttgttaacgt tctgccttaa
     4201 gcacccgacg aaaccagccc cgcggcgcat atattcctgg gcggcagcga acctgcggtg
     4261 atttcgttcg ccggagggcg ttgcccgccc gggttgaatc atttcaggaa aattcagaag
     4321 caatgggatg actttcgccc cggtccacac cacgttgcac gctatggcct cgatccattg
     4381 cgctaaactg gagactccga tgaatctcag gtgtcttgct accgccttta tggctgccgg
     4441 tttgcttatc gcagcaccgg ctttcgctca aacatcctcg gcgcaaaagc agccgacgca
     4501 agaaggcggt ggtgacgaaa cgccttgcgg ccttccgtgg cacgccaatg cgagcgccga
     4561 ccccaactgc aggcagcaga cgcagagctt aactcctttg ccggtgcagg gcagccaaga
     4621 gtccactgga cacaagtaat acgaccggcg ccggtcgctc catcccggtt atcaacctgc
     4681 aagccgggac ggaacatcgc cgcacaggag cacgcgcacg tgctatggct gcgccgacgt
     4741 caggaattga aacacagtac cgcgtggctc gttcggctcc gcccacagtc gcccgccatg
     4801 cgcttcgatg atcgaacggc agatcgacag gcccatgccc aggccagtgg actttgtggt
     4861 gtagaacgcc tcgaagagac gttcgtgagt ccccggcgcc aatcctgggc ccgaatcacg
     4921 caccaccacg agcacgccac accgacccgc ctccgcggtg tcgatctgca agtcacgctg
     4981 ctcatcgctg acgctgccca tggcctcgac cgcgttcacg atcaggttga gcatgacctg
     5041 ttgcagttga acccgatcgc cgtgaataag cggcaagccc accgcgagat gcgtctgcac
     5101 cgtgacgccg gtctttatcg cttcgccgcg cgtgagttca atcacctcgc gaatcgcttc
     5161 gttgatgtcc accgggtcgt tccgtggcgg cgcctttttg atcaactcac ggatccggcc
     5221 gataacgtcg ccggcgcgaa tgccgtcctt gacgatgcga gtcagtgcta ccctcacctc
     5281 tgcgagacgc ggcggttcac gatccagcca gagctgcgct gcctcggcgt tggtgaccat
     5341 cgccgcgatc ggctggttta cttcatgggc aatcgaggcg gtgagctgcc ccatcgtcgc
     5401 gacacggctg gcatgcgcca cctccgtctg cacctcgcgg tgacgccgct cgctttcgcg
     5461 cgcatcggcc tccgcccgct tgcgctcggt cagatcgagc acgaatgaaa caccctgttt
     5521 gccgccgtcg tcgaaacccg cggcgccgac caacacgggc aaacggctgc cgtctttgcg
     5581 gaaatattcc ttttcgtatg gttggaccgt cccggtcatc agcagctctg gcgtccagtc
     5641 ctgttcatgg cgttcgcgcc aatccggcgg tgtaaggtcg gtccaactga cccgccccga
     5701 gacgagatcg tcacgatcgt gtcccaccat gcggagaaac gcgtcattgg cctcgaagat
     5761 ctgtccttcc gatccccaga tgaaaatccc gatgatgttg gcgtcaacca gccgccggat
     5821 ttttgcttcg cgctcaatgc catcgcggta caagcgagtg ttctcaagtg ccactgccgc
     5881 ctgcgaggca agcaacttca gcaccgcaat gcgcgccggc gcgaaagccc ccgcagtgag
     5941 gttgttttcc aggtagagaa cgccgatgag cctggcctga ttgatcaacg gcagacagag
     6001 gagcgaacgc gcctggcgct ggcggatgta ggggtccgcg gcaaacgacg gctcgctgac
     6061 g
//
LOCUS       DATAVD010001911         8641 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2973713, whole genome shotgun sequence.
ACCESSION   DATAVD010001911 DATAVD010000000
VERSION     DATAVD010001911.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8641
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2973713"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..953
                     /locus_tag="VHX39_36380"
     CDS             <1..953
                     /locus_tag="VHX39_36380"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422733.1"
                     /note="acts in conjunction with GvcH to form
                     H-protein-S-aminomethyldihydrolipoyllysine from glycine;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycine dehydrogenase
                     (aminomethyl-transferring)"
                     /protein_id="HEX3996679.1"
                     /translation="LMITYPSTHGVFEGGIRDICGVVHQYGGQVYMDGANMNAQVGLT
                     SPASIGADVCHLNLHKTFCIPHGGGGPGVGPIGVAAHLAGFLPNHPLRADAGPAGGIG
                     PVSAAPFGSALILPIPYAYIRMMGPAGLKRATEVAILSANYIAGRLREAYPVLYSGPG
                     GMVAHECIIDCRGFAVEAGVQVEDIAKRLQDYGYHAPTMSWPVAGTLMIEPTESESKA
                     ELDRFCDAMIAIRGEIASIAAGRLDRADNPLKHAPHTAAEVMADVWTHAYTRGQAAFP
                     LPWVAASKYWPPVKRVDNVYGDRNLICTCAPLEAYAQAAE"
     gene            complement(960..1823)
                     /locus_tag="VHX39_36385"
     CDS             complement(960..1823)
                     /locus_tag="VHX39_36385"
                     /inference="COORDINATES: protein motif:HMM:TIGR03620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03620 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HEX3996680.1"
                     /translation="MKLGRLGVWYSTDKHAGNAQIADFTKTVEKLGYDTLWYPESRGF
                     ESFTIAGYMLSQTRSLKIGSSIASIYARDAFTSRRGMISLKQLYGDRFILGLGVSHLP
                     MVEGIRGHTYEKPVPAMRAYLNGIAKGESGAADFPICLAALGPLMLKLAGQMTQGAVP
                     YNTIPKHTAEAARILGSGKWLAIEQKVTVETDPTRARALGREELSRYLVLDNYRNAWF
                     GMGFTEADLSNGGSDGFIDQMVLWGTPDQVKAGLRAHFDAGATHVAIQPVHAPGDTAG
                     RDKMLAALADT"
     gene            complement(1838..3025)
                     /locus_tag="VHX39_36390"
     CDS             complement(1838..3025)
                     /locus_tag="VHX39_36390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008495298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEX3996681.1"
                     /translation="MARPFEGIRIIDITHVLAGPFAAYQLGLMGADVIKVEDPNDPDQ
                     SRDSGSDNDLNHAGMGTGFLTQGSNKRAITLNLKTEQGREILKKLVATADVLVENYRP
                     GAFEALGLGYEDLRKINPKLIYASFSAFGQGGPKRVRTAYDHVIQSTSGIMAMTGTPE
                     VNPIKIGAPAIDYATGTMGAYALSAALFQRERTGQGQRVDMAMLDVAMILMASHVTGY
                     LRNGKHPKPSGNRMPHATSMAYKTADGTLMIGASNLRQQKRLWTVLERPDLIKRTNDE
                     RDADHAREERTLAEIMLTRTAAEWEEYLQQRHVPASRVRTMGEALEDPQLASRGLLHR
                     HENVPGIDGSFTVPMAAFKFGHDGPSIDRPPPRFGQHNDEVLGELGYSDSDIAGFRSA
                     NII"
     gene            complement(3074..4087)
                     /locus_tag="VHX39_36395"
     CDS             complement(3074..4087)
                     /locus_tag="VHX39_36395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HEX3996682.1"
                     /translation="MRLYRLPQATGIDSLTQAEADIPQPGRGQALVRMHAASLNYRDL
                     MIVNGRAARGAPPANLIPLSDGAGEVVSVGPEVTRVKPNDRVAGCFMQSWIGGPIGPD
                     DAASSMGGAIDGVLSEYRLFDQTGLVHLPAHLSYEQGATLPCAGVTAWNALFGGQTLY
                     PGDSVLVLGTGGVSVFALQLAVAAGLTVVATSSSDDKLQRMQHLGATHLINYRQHPEW
                     QDQVVALTGGGVARVVEVGGPGTLSRSILATRQGGEIGMIGALTTGGEINPVTAMRKG
                     LIMRGIYVGSRQMFEAMNRAITAHRIEPVVDRVFPFEHAADAYRHQTSQTHLGKVVIR
                     IAG"
     gene            complement(4091..5713)
                     /locus_tag="VHX39_36400"
     CDS             complement(4091..5713)
                     /locus_tag="VHX39_36400"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEX3996683.1"
                     /translation="MPSTLRGADIVVRTLERAGHTDIFTLSGNHIMSLFDAAIETKLS
                     LMHVRHEAATVHMADAYGRLTGRPGIAWVTGGPGHANAVGALFTALGQETPMVLMSGH
                     TETDQLGRGGFQELRQVEMAAPVCKAAWMATNTATVGMDVAKAIRLATSGRPGPVHLS
                     LPSDVLDATVPEDAVVWPTEAEFAAPAIPLDNTTADAVLALLATASRPLIIGAPVLAT
                     AKGRDLLRRIESALTIPACLSEGPRAFNDASLGAYAEVAKRADMVLLLGKALDFTLKF
                     GGAPFTADCRFISIDPDGAILGRAARSRGLAFGCVADTYPAAEALIARGRPRDPAWLS
                     EARSAFDDRPAAWADLASKTQGMLHPAQVFRTLQPFLDRDPGSVLICDGGEFAQWGQS
                     LLRNERRMINGVTGSIGSSLPMASGARVVEKTAPVFAVLGDGTFGFHMSEIETAVRLN
                     LPYVAVVGTDCRWNAEYNLQVRDYGPNRTHGCELNATRYDLVATALGGHGELVTDATE
                     LHGAIERSLASGKPAVINVMIESIPSPVVRRA"
     gene            complement(5847..6758)
                     /locus_tag="VHX39_36405"
     CDS             complement(5847..6758)
                     /locus_tag="VHX39_36405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3996684.1"
                     /translation="MGMLDGKVAVVTGAGGGIGRATAIAIAANGGKVVVNDIGATVTG
                     EGQDAGPAPRVVAEIEQTHGKGMAVANSGSVASWEDAQRMVQDAIDHFGRIDIVVNNA
                     GILRDRMFHYMSIEEWDAVIKVHLYGAFYVSRAAIPHFRKQESGNYTHITSTSGLIGS
                     VGQVNYGAAKMGIAGLSRNIAMDMQRYNVRSNCIGPHAFSRMIETVPGQTEEQLQARA
                     AKTRPDHIAQLIAFLGTDAASGVSGQIFGVRGNEVYLYNQPRPIRIMARPDGWTPEKL
                     AEHWLPAVKNSFTPLERTRDVYAWDPI"
     gene            6852..7733
                     /locus_tag="VHX39_36410"
     CDS             6852..7733
                     /locus_tag="VHX39_36410"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3996685.1"
                     /translation="MELGFLGLGQMGSAIAERLQDAGAMLHVFDPNKAALAPFVAKGA
                     RAHASPTGVADAARIVFACLPSGAICEAVARDVAAGSAVRIYVEMSTIGGPAQARVQA
                     IVEAKGITLVDCPISGGPKGARAGTLTVILAGPPDARAEIRPWLERVGKNLFEVGDKP
                     GQAQLMKLVNNLVNAANMATAFEALVLGAKGGLDPDQMVNVLNVSTGQNSATLTKVPK
                     AVLTGSFDYGSSLTIMLKDVMLGLKEAEALGVPMWVHGTVGQLWRFAEQQGLGPADFT
                     SMIKVLEGWAGVEVRSR"
     gene            complement(7859..>8641)
                     /locus_tag="VHX39_36415"
     CDS             complement(7859..>8641)
                     /locus_tag="VHX39_36415"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEX3996686.1"
                     /translation="LIAADGIHSAVRQTLYPQEGPPIWNGAILWRGTTRARPFLTGRS
                     MIMAGHEFQKFVAYPISRIASDQGEAEINWIAERKFRPDDSWRREDWNRPGNLDDFLP
                     QFAGWRFDWLDVPAVIQAADRCFEYPMVDRDPLDRWTFGRVTLLGDAAHPMYPIGSNG
                     ASQGILDARVLAREIRRAGPVPDALLAYEAERRPATGKIVTANRGNGPEQVMQLVEQR
                     APDGFVRIEDVLTPAELEGTATGYKRIAGFDKDALNARGPIV"
BASE COUNT         1418 a         2607 c         2995 g         1621 t
ORIGIN      
        1 cgctgatgat tacgtatccg tccacgcatg gtgtgttcga gggcggcatt cgcgacatct
       61 gtggcgtggt tcatcagtat ggcggccagg tttatatgga tggcgccaac atgaacgcgc
      121 aggtggggct gacctcgccg gcttcgatcg gggccgatgt ctgccatctg aacctgcaca
      181 agacgttttg cattccgcat ggcggcggtg ggccgggcgt gggtccgatc ggcgtggcgg
      241 cgcatctggc ggggttcctg ccgaaccatc cgctgcgggc ggatgccggg ccggcgggcg
      301 gcattggtcc ggtctcggcg gcgccgttcg gcagtgcgct gatcctgccg attccttatg
      361 cgtatatccg catgatgggt ccggccgggt tgaagcgcgc gaccgaggtg gcgatcttgt
      421 ccgcgaacta tatcgcgggc cggctgcggg aggcgtatcc cgtgttgtat tcgggtcccg
      481 gtggcatggt cgcgcatgaa tgcatcatcg actgtcgcgg ctttgccgtc gaagcgggcg
      541 tgcaggtgga ggacatcgcc aagcggttgc aggactatgg ctaccatgcg ccgacgatgt
      601 cctggccggt tgccggaacg ctgatgattg aaccgacgga gagcgaatcg aaggccgaac
      661 tggaccggtt ctgcgatgcg atgatcgcga tccgggggga gattgcctcg atcgccgcgg
      721 gcaggctgga tcgtgcggac aatccgttga agcacgcgcc acataccgcc gcggaggtca
      781 tggcggatgt ctggacacat gcgtatacgc ggggtcaggc ggcgtttccg ctgccttggg
      841 tggcggcgtc gaaatactgg ccgccagtca agcgggtgga caatgtgtat ggcgaccgca
      901 acctgatctg cacctgcgcg ccgctggagg cgtacgcgca ggcggcggag tgatcgggtt
      961 caggtatccg ccagcgccgc gagcatcttg tcgcggccgg cggtgtcgcc gggggcgtgg
     1021 accggctgga tcgccacgtg ggtcgctccg gcgtcgaaat gggccctgag tcccgccttc
     1081 acctgatcgg gggtgcccca tagcaccatc tggtcgatga aaccgtcgga gccgccgttc
     1141 gacaggtcgg cctcggtgaa gcccatgccg aaccaggcgt tcctgtagtt gtcgagcacc
     1201 aggtaacggg agagttcctc ccggcccagg gccctcgccc tggtggggtc ggtttcaacg
     1261 gtaactttct gttcgatggc cagccatttc ccggagccga ggattctcgc tgcctcggct
     1321 gtgtgtttgg ggattgtgtt gtatggcacg gcaccttggg tcatttgtcc ggccagcttc
     1381 agcatcagtg gtcccagggc ggcgaggcag atcgggaaat cggctgcccc ggattcacct
     1441 ttcgcaatgc cgttcaggta ggcccgcatc gccggcacgg gcttttcgta tgtgtggccg
     1501 cggatgccct cgaccatcgg caggtggctg acgcccaggc cgaggatgaa acgatcgccg
     1561 tagagttgct tgaggctgat catgccgcgg cgggaggtga acgcgtcccg ggcgtagatc
     1621 gaggcgatgg agctgccgat tttcagagat cttgtctgtg acagcatgta gccggcgatg
     1681 gtgaacgatt cgaaaccgcg tgattccgga taccagagcg tatcatatcc cagcttttca
     1741 accgtcttcg tgaagtccgc gatctgcgcg ttgccggcat gcttgtcagt ggagtaccag
     1801 accccgaggc gtcccagttt catgttcaga atcccgccta gataatgttc gccgaccgga
     1861 agccggcgat gtcggagtca ctgtagccga gttcgcccaa tacctcatca ttgtgctgcc
     1921 cgaaccgtgg cggcggccgg tcgatgctgg ggccgtcgtg gccaaacttg aaggcagcca
     1981 ttggaaccgt gaatgatccg tcgatgccgg gcacattttc gtgccggtgc agcagcccgc
     2041 gcgaggcaag ctgggggtcc tccaatgcct cccccatcgt gcgcacgcgg gaggcgggga
     2101 cgtgtcgttg ctgaaggtat tcctcccact cggcggcggt tcgggtcagc atgatctcgg
     2161 cgagggtgcg ttcctcgcgg gcgtggtcgg cgtcgcgttc atcgttggtg cgcttgatca
     2221 ggtcgggccg ttccagcacc gtccatagcc gtttctgctg ccgcaggttg gaggcaccga
     2281 tcatcagtgt gccgtcggcg gtcttgtagg ccatggaagt ggcgtgcggc atgcggttgc
     2341 cggacggttt cggatgtttg ccgttgcgta gatagccggt gacatgactc gccatcagga
     2401 tcatcgcgac atccagcatc gccatgtcga cgcgctgacc ctggccggtg cgttcccgct
     2461 ggaacagcgc ggcggacaag gcgtaggcgc ccatcgtgcc ggtggcgtaa tcgatcgccg
     2521 gggcgccgat cttgatgggg ttgacctccg gcgtgccggt catcgccatg atgccggagg
     2581 tggactggat gacgtgatca tacgccgtgc ggacacgctt cggaccgccc tggccgaacg
     2641 cggaaaacga cgcgtagatc agcttcggat tgattttgcg gaggtcttcg tagccgagac
     2701 ccagggcctc gaacgcgccg ggccggtagt tctccaccag cacatcggcc gtcgccacca
     2761 gcttcttcaa gatttcgcgt ccctgctcgg ttttcaggtt cagggtgatg gcgcgcttgt
     2821 tcgatccctg ggtgaggaac ccggtgccca tgccggcgtg gttcaaatcg ttgtcactgc
     2881 cggaatcacg gctttggtcg gggtcgttgg gatcctcgac cttgatgacg tcggcaccca
     2941 tgaggccgag ttggtaggcg gcgaaggggc cggcgaggac gtgggtgatg tcgataatgc
     3001 ggatgccttc gaatggacga gccatcgcta tcctcctgtg ttttccggac ggtgcgacga
     3061 aggtcggggg gcgtcaaccg gcgatgcgga tcactacctt gccgaggtgc gtctggctgg
     3121 tctgatggcg gtaggcatcg gcggcgtgct cgaatgggaa cacccgatcg acgaccggct
     3181 cgatccggtg ggcggtgatc gctcggttca tcgcctcgaa catctggcgg gagccgacat
     3241 agatgccgcg catgatcaga ccctttcgca tcgcggtgac gggattgatc tcgccgccgg
     3301 tggtcagggc gccgatcatg ccgatttcgc cgccctggcg ggtggcgagg atggagcggg
     3361 acaatgtgcc gggtccaccg acttccacca cgcgggcgac gccgccgccg gtcagcgcga
     3421 cgacctggtc ctgccattcc ggatgctggc ggtagttgat caggtgggtg gcaccaaggt
     3481 gttgcatccg ttgcagtttg tcgtcggatg acgatgtggc gacgaccgtc aatcccgccg
     3541 cgacggcaag ctgcaaggcg aagacggaca caccgccagt gccgagaacc agcacgctgt
     3601 cgccgggata cagcgtttgg ccgccgaaca gcgcgttcca ggctgtgacg ccggcacagg
     3661 gcagggtggc accctgttcg taggacaggt gcgcgggcag atggacaagg ccggtctggt
     3721 cgaacaggcg gtattccgac aggactccgt cgatggcgcc gcccatcgag ctggcagcgt
     3781 cgtcggggcc gatgggaccg ccgatccagc tttgcatgaa gcatccggcg acccggtcgt
     3841 tgggtttgac tcgggttacc tccggtccga ccgagaccac ttcgccggcg ccatccgata
     3901 gcggaatgag atttgccggc ggggcgcctc gggcggctcg gccgttcacg atcatcaggt
     3961 cgcggtagtt cagggaagcg gcatgcatcc gcaccagggc ctggcctcgg ccgggttgtg
     4021 gaatgtccgc ctcggcctgg gttagcgagt cgatgccggt ggcctgggga agccgataca
     4081 gccgcatgga tcaggccctt cgcacgaccg gggacgggat gctttcgatc atgacgttga
     4141 tcaccgccgg cttgccgctg gccagggacc gttcgatggc gccgtgcaac tcggttgcgt
     4201 cggttaccag ttcgccatgg cccccgaggg cggtggcgac caggtcgtag cgcgtggcgt
     4261 tcagttcgca gccatgcgtg cggttggggc cgtagtcacg gacctgcaga ttgtactcgg
     4321 cgttccagcg gcagtcggtg ccgaccacgg cgacgtaggg caggttcaac cgcacggccg
     4381 tttcgatctc cgacatatga aacccaaacg tgccgtcgcc gagcaccgcg aagacaggcg
     4441 cggttttctc gaccacgcgg gcgccggagg ccatcggcag ggaggatccg atcgatccgg
     4501 tcacgccatt gatcatgcgc cgttcgttgc ggaggaggct ttgaccccat tgggcgaatt
     4561 cgccgccgtc gcagatcagg acgctgccgg gatcacggtc caggaacggt tgcagtgtcc
     4621 ggaagacctg ggccgggtgc agcatgccct gagtttttga ggccaggtct gcccaggcgg
     4681 ccgggcggtc atcgaaggcc gatcgagcct cggaaagcca agcgggatcg cggggacggc
     4741 cccgggcgat gagtgcctcc gcggccggat aagtatcggc tacgcaacca aatgccagtc
     4801 cgcgggaccg agcggctcgg cctaggatgg cgccgtccgg atcgatggaa atgaaacgac
     4861 aatccgcggt gaagggagcg ccgccaaatt tcaaggtaaa atccagggct tttcccagca
     4921 gaagcaccat gtcggcacgc ttcgcgactt cggcgtaggc gcccaggctc gcgtcgttaa
     4981 aggcgcgcgg gccttcgctg aggcaggcgg ggatggtcag ggcggactcg atgcggcgca
     5041 gcaggtctcg gcccttggcg gtggccagga cgggcgctcc gatgatcagc gggcggctgg
     5101 ccgtcgccaa cagcgccagc acggcgtcgg ccgtggtgtt gtccaggggg atcgcgggtg
     5161 cggcgaattc ggcttcggtt ggccagacca cggcatcttc cggcaccgtg gcgtccagca
     5221 cgtccgatgg caggctgaga tgcaccggtc cgggacggcc cgatgtggcg aggcggatcg
     5281 ccttggcgac gtccatcccg acggtggcgg tattcgtggc catccaggcg gctttgcaga
     5341 cgggcgcggc catttcgacc tgccgcagtt cctggaagcc gcctcggccg agctgatcgg
     5401 tctcggtgtg gcctgacatc aagaccatcg gggtttcctg gccgagggcg gtgaacagcg
     5461 cgccgacggc attggcgtgt cccgggccac cggtgaccca ggcgatgccg gggcgtccgg
     5521 tcaaacgtcc atacgcatcg gccatatgga cggtcgcggc ttcatgccgg acatgcatca
     5581 gcgacagttt cgtttcgatt gcggcgtcga acagcgacat gatgtgattg cccgacagcg
     5641 tgaagatgtc ggtatggccg gcgcgttcga gcgtgcgcac aacgatgtcg gcgccgcgga
     5701 gagtggatgg catgcggtgg tcccttactc gatcgtcatc gtccggcgcg tcggaaaacc
     5761 accggaggcg ttcgtgcgcg gatgaccggg acgcgcccgg tcatgacgat caacgcacga
     5821 acacactcct ggcgttcggt agagcgttag atcggatccc acgcgtagac gtcacgggtc
     5881 cgttccagcg gcgtgaagct gttcttcacg gcgggcagcc aatgttcggc aagcttctcc
     5941 ggcgtccagc cgtccggacg cgccatgatg cggatcgggc ggggctggtt gtacagatag
     6001 acctcattac cacggacgcc gaagatctgg ccggacacgc cggacgcggc atcggtgccg
     6061 aggaaggcga tcaactgtgc aatgtggtcc ggccgggtct tggcggcacg ggcctgaagc
     6121 tgttcctcgg tctggccggg cacggtttcg atcatgcggc tgaacgcatg cggcccgatg
     6181 cagttcgaac gcacgttgta tcgttgcata tccatcgcga tgttgcgcga caggccggca
     6241 atgcccattt tcgcggcccc gtagttcacc tggccgacgc tgccgatcag gccggaggtc
     6301 gaggtgatat gggtgtaatt gccgctttcc tgcttgcgga aatgcggaat ggcggcgcgc
     6361 gagacgtaga aggccccata caggtggacc ttgatgacgg cgtcccattc ctcgatcgac
     6421 atgtagtgga acatgcggtc gcgcaggatg ccggcgttgt tcacgacgat gtcgatgcgg
     6481 ccgaaatggt cgatggcgtc ctgcaccatg cgctgggcgt cttcccaact ggcgacgctg
     6541 ccactgttgg cgacggccat gcccttgccg tgggtctgct cgatttcggc caccacgcgc
     6601 ggtgcggggc cggcgtcctg gccctcaccc gtcacggtcg cgccgatgtc gttgaccacg
     6661 accttgccgc cgttcgcggc gatggcgatg gctgtcgctc gcccgattcc gccgccagcc
     6721 cccgtgacca cggcgacttt tccatcaagc atacccattt gtttcctcct tcaatgtgga
     6781 acgccgcatt gtgcgacgaa gcgaaatccg tgtcaccatc gggccaggac atcgggccag
     6841 gaggagccat catggaattg ggattcttgg gactgggcca gatgggatcg gcgatagccg
     6901 aacggctgca ggatgcgggg gcgatgctgc atgtgttcga tccgaacaag gcggcgcttg
     6961 cacctttcgt tgccaagggg gctcgggcgc atgcttcgcc gacgggggtg gccgacgctg
     7021 cgcgcatcgt tttcgcctgc ctgcccagcg gcgcgatttg tgaagccgtg gcgcgcgacg
     7081 tagccgccgg cagcgccgtc cgcatctacg tggaaatgtc caccatcggc ggccccgccc
     7141 aggccagggt tcaggcgatc gtggaagcca aaggcatcac actggtggac tgcccgatca
     7201 gcggcggacc aaaaggcgcc agggccggga cgttgaccgt gatcctcgcc ggccccccgg
     7261 acgctcgggc agaaatccgc ccctggcttg aacgcgtcgg caagaacctt ttcgaggtcg
     7321 gcgacaagcc gggccaggcg cagttgatga agctggtcaa caacctggtg aatgccgcca
     7381 atatggcaac cgcattcgag gccttggtgc tgggcgcgaa gggcgggctc gacccggatc
     7441 agatggtgaa tgtgctgaat gtctcgaccg gacagaacag cgcgacgttg acgaaggtgc
     7501 cgaaagcggt gctgaccggg tcgttcgact acgggtccag cctgacgatc atgctgaagg
     7561 acgtcatgct cggactgaag gaggccgagg cgctgggcgt gccgatgtgg gtacacggca
     7621 cggtgggcca attgtggcgc ttcgccgaac agcaggggct cgggccggcg gatttcacct
     7681 caatgatcaa ggtgctggag ggttgggccg gggtggaggt gcggagtcgc tagtgtcccg
     7741 aatctgaagt tcgccacagt gggcgaacct cagattcgaa acacgagctc tttgttttca
     7801 gtggcctgct ggtcccggaa gcctgccgta gaatgcgacg aacttccggg gtcggacact
     7861 agacaattgg cccacgagca ttcagcgcgt ccttgtcgaa cccggcgatc cgcttgtagc
     7921 cggtggcggt gccttccagc tcggccggtg tcagaacgtc ctcgatccgg acaaacccat
     7981 ccggagcgcg ctgttcaacc aactgcatca cctgttccgg cccgtttccc cggttcgccg
     8041 tcacgatttt cccggtagcc ggccgccgtt cggcttcgta ggccaacagc gcgtccggca
     8101 ccggtccggc ccgccgtatt tcgcgtgcca gcacccgggc atccaggatg ccctgcgacg
     8161 cgccgttcga cccgatcggg tacatgggat gggcggcatc ccccaacagg gtcacccgcc
     8221 cgaacgtcca gcgatcgagc ggatcacgat ccaccatcgg gtattcgaag catcgatcgg
     8281 ccgcctgaat caccgccggg acgtccagcc agtcgaaccg ccatccggcg aactgcggca
     8341 ggaaatcatc caggttgccg ggtcggttcc aatcttcccg ccgccaggaa tcgtcgggcc
     8401 ggaatttccg ttcggcgatc cagttgatct ccgcctcacc ctggtccgaa gcgatccggg
     8461 aaatcgggta ggcaacgaac ttctggaact catgccccgc catgatcatc gaacgcccgg
     8521 tcaggaaggg tcgggcgcgt gtggtgccgc gccacaggat ggcgccgttc cagatcggcg
     8581 gcccctcctg cgggtagagc gtctgccgca cggcggagtg gatgccgtcg gccgcgatca
     8641 g
//
LOCUS       DATAVD010001912         2490 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1853317, whole genome shotgun sequence.
ACCESSION   DATAVD010001912 DATAVD010000000
VERSION     DATAVD010001912.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2490
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1853317"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            111..506
                     /locus_tag="VHX39_36420"
     CDS             111..506
                     /locus_tag="VHX39_36420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012553608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEX3996687.1"
                     /translation="MAERTTRVTLRLDFGDTVRLGPGKIRLLESIEELGSISAAGRSM
                     GMSYRRAWLLVDSLNQAFVEPVVATRPGGKADKRAEVTTFGKAVIERYRSMEDAARNA
                     ITPDLRPLEAAINEDAFPPRMRDPADSSV"
     gene            722..1207
                     /locus_tag="VHX39_36425"
     CDS             722..1207
                     /locus_tag="VHX39_36425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEX3996688.1"
                     /translation="MMRSLHLDATKCTGCMQCEMACSYENYGVFNPAKSRIKVFDFHE
                     TGRKVPYTCTQCDEAWCQHACPVEAISRDKTTGAVVVNEATCVGCKVCTIACPFGTIN
                     YVADTGKVQKCDLCGGKPACAEACPTGAITYIDSDWTGLDRMKQWAGKLDSGAGAGHA
                     D"
     gene            1219..>2490
                     /locus_tag="VHX39_36430"
     CDS             1219..>2490
                     /locus_tag="VHX39_36430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016625 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, iron-sulfur
                     protein as acceptor [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEX3996689.1"
                     /translation="MGWQRKLLRVDLTAGTCKSEPLNMEWAKAFLGQRGLATKYMLEE
                     VDPKVDPLSPGNKLIFATGPLTGTMASTGGRYSVITKGPLTGAIACSNSGGHWGAELK
                     MAGWDMIILEGKSPTPVYLHIENDDAELLDASDIWGKTTWETEPALKRKHQDPQMRVS
                     CIGRAGENQVLYAAVINDLHRAAGRSGVGAVMGSKNLKAIAVRGTKGVGGIRDPMGFM
                     RATTAAKAVLAGNAVTGEGLPKYGTQVLMNVINEVGAMPTRNHRDVQFEGAKDISAEA
                     MLEPRETDGKPNLVTNQACFGCTIACGRISKIDATHYTVINKPEYWAASGGLEYEAAW
                     ALGSANGVNDLEALTYANFLCNEDGMDPISFGATVGAVMELFEMGVLTKEQIGIEAPF
                     GSAKALTFLCEQTARGEGFGKEVGQGSKRLTA"
BASE COUNT          512 a          799 c          777 g          402 t
ORIGIN      
        1 tcgtcaccgc gtgattcgtt cacccgattc gcctgccgcg cgggtgtccc ggtcgctatc
       61 aactgccggg cttgtcgtct cgccagacca gaactggtag tgctgccagt atggcagaac
      121 gaacgacacg cgttaccctg cggctggact tcggcgacac cgtccgcctc gggccaggca
      181 agattcgctt gcttgagtcg atcgaagaac tgggctcgat cagtgctgcc ggcagatcca
      241 tgggcatgtc gtatcgccgt gcctggcttc tcgtggacag cctcaaccag gcatttgtgg
      301 aacccgttgt cgcgacccgc ccagggggaa aagccgataa gcgtgccgag gtcacgacgt
      361 tcggcaaagc ggtcatcgag cggtaccgat ccatggagga cgcagcccgc aatgcgatca
      421 cgcccgatct gcgacctctg gaagccgcga tcaatgagga cgcattcccc ccaaggatgc
      481 gcgacccggc cgactcctcg gtctgaagca aaatagcctt cgaggcgccc tgcgccccgc
      541 cttgcctccc gggttcagat ttgccatggt cacgatatac tcacgaatat cgtgacggcc
      601 gcccatcgat cgaccggggc gtgaaaacaa gagggacgca cctggccaat cggccgtccc
      661 acgaaccaat ggacccggtg gttaccgaaa caaaaccacc tcacgaggga gcccgaacgt
      721 catgatgaga tccctgcatc tcgacgccac caaatgcacc ggctgcatgc aatgtgagat
      781 ggcctgctcc tacgagaact acggcgtgtt caaccctgcc aaatcgcgga tcaaggtgtt
      841 cgacttccac gagaccggcc gcaaggtccc ttacacctgc actcagtgcg atgaggcgtg
      901 gtgccaacat gcctgcccgg tcgaagccat ttcgcgagac aagaccaccg gtgctgtggt
      961 cgtcaacgag gcgacctgcg tcggctgcaa ggtctgcacc attgcctgcc cgttcggcac
     1021 catcaactac gtcgccgata ccggaaaggt gcagaaatgc gacctgtgcg gcggcaagcc
     1081 cgcctgcgcc gaggcctgcc cgaccggtgc catcacctac atcgactccg attggaccgg
     1141 gctcgaccgg atgaagcaat gggcgggtaa gctcgatagc ggcgccggcg ccggtcacgc
     1201 tgactgaggg agacaaccat gggctggcaa cgcaaactgc tgcgcgtcga tctcaccgcc
     1261 gggacctgca agtccgagcc gctcaacatg gagtgggcca aggcgtttct gggccagcgc
     1321 ggcctcgcca cgaaatacat gctggaggag gttgatccga aggtcgaccc gctgtcccct
     1381 ggcaataagc tgatcttcgc gaccggaccg ttgaccggaa cgatggcgtc cacgggcggg
     1441 cgctactcgg tcatcaccaa ggggccgctg accggcgcca tcgcctgctc caattcaggc
     1501 ggccattggg gtgccgaact gaagatggcc ggttgggaca tgatcatcct ggaagggaag
     1561 tcgccaaccc cggtctacct gcacatcgag aacgacgacg ccgaactgct cgacgcatcg
     1621 gacatctggg gcaagaccac gtgggagacg gaaccggcac tgaaacgcaa gcatcaggac
     1681 ccgcagatgc gcgtgtcctg catcggccgg gccggcgaga accaggtgct gtatgccgcc
     1741 gtgatcaacg atctgcatcg cgccgccggg cgctccggcg tgggtgcggt catggggtcg
     1801 aagaacctca aggcgattgc cgtgcgcggc accaagggcg tcggcggcat cagggacccg
     1861 atgggcttca tgcgggccac gaccgccgcc aaggccgtcc tggcaggcaa cgcggttacc
     1921 ggcgagggcc tgccgaaata cggcacgcag gtgctgatga acgtcatcaa cgaagtcggc
     1981 gcgatgccga cccgcaacca ccgcgacgtg caatttgaag gcgccaagga catctcggcc
     2041 gaggcgatgc tggaaccgcg cgagaccgac ggcaagccga acctggtaac caaccaggcc
     2101 tgtttcggct gcacgatcgc ctgcggccgg atctccaaga tcgatgcgac gcattacacg
     2161 gtcatcaaca aacctgagta ctgggctgcc tccggcggcc tggaatacga ggccgcctgg
     2221 gcgctcggtt cggcgaacgg cgtcaacgat ctggaggcgc tgacctacgc caacttcctc
     2281 tgtaacgagg acggcatgga cccgatttca ttcggagcca ccgtcggtgc ggtgatggaa
     2341 ctcttcgaaa tgggcgtgct gaccaaggaa caaatcggca tcgaggcgcc gttcggttcc
     2401 gccaaggcac tcacgttcct gtgcgagcag accgcgcgag gcgaaggttt tggcaaagaa
     2461 gtcggccagg gctcgaaacg cctgactgcc
//
LOCUS       DATAVD010001913         2363 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2043226, whole genome shotgun sequence.
ACCESSION   DATAVD010001913 DATAVD010000000
VERSION     DATAVD010001913.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2363
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2043226"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..338
                     /locus_tag="VHX39_36435"
     CDS             <1..338
                     /locus_tag="VHX39_36435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996690.1"
                     /translation="GLFFVIAAWERRSARMCDTFWTVRLIFYACAILLFFVHAAGVSP
                     IVMKSMIRYSLGVHALLLTAIGHLCAQPSSQALPKKWLKPSLGIGCIALLLIQAALAW
                     RFLHEKWVA"
     gene            586..1884
                     /locus_tag="VHX39_36440"
     CDS             586..1884
                     /locus_tag="VHX39_36440"
                     /inference="COORDINATES: protein motif:HMM:NF033517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HEX3996691.1"
                     /translation="MQQLLRLVEELHRAGNRQAAPFRKQDEPTSAPKKPGRKSGRRHG
                     PHAHRSIPPRIDETYDVPLPAKCPHCGGRGLSEMYVTTQYQTEIPRRLIYRQFDVHTG
                     TCHHCGRRVQGRHVLQTSTARGAATSQLGPNLHALLTILNKQLGLSHGKSVKLLATMF
                     EGLHIARATSIRSIQRTAARCRAAYHRLRQDVRGASEVAPDETGWRVAGRSAWLHAFV
                     SSRATCYVIDPTRSQAPAEALLGLDWPGTLVHDGWSVYDQFKRAFHQQCVRHLQRRCQ
                     ALLPTAVGGAVRLPRAVLGLIDRAYALRRAWRGHRLSGDRLAEQGLELACELEMLAEG
                     RFTYEPNRRLAKHIFKHAIHWFWFLIDPAIAATNYRAEQALRPAVVNRKVWGGNRTWY
                     GAACQSILMSVLRTCEQRSVSPFAFLLDVLCRTKPQLVLA"
     gene            complement(1859..>2363)
                     /locus_tag="VHX39_36445"
     CDS             complement(1859..>2363)
                     /locus_tag="VHX39_36445"
                     /inference="COORDINATES: protein motif:HMM:TIGR03696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RHS repeat-associated core domain-containing
                     protein"
                     /protein_id="HEX3996692.1"
                     /translation="NVAPGGGTVSLSNPDRVYWALADNEGTVRDLIDASGNEVSHYLY
                     DSFGKVLAGDTTLTHYLYAGQYFDGQAGLQYNHERWYDASLGRWLSQDPLGYAAGDAN
                     LYRYVGNSPTNFIDRTGLDPSGAEGNDSGSGGGGGGGGGGDDSGEKDDPSQFVIDYRL
                     RRGRVVA"
BASE COUNT          459 a          727 c          693 g          484 t
ORIGIN      
        1 taggcctttt ttttgtgatc gcggcttggg aacgccgctc agcgagaatg tgcgacacct
       61 tttggacagt gaggctgatc ttttatgcct gcgccattct gctgtttttt gttcatgccg
      121 ctggcgtgtc acctatcgta atgaaaagca tgatccggta ttcccttgga gtgcatgccc
      181 tcctgctaac ggccatcggc cacctatgcg cacagccttc ttctcaggca ctaccgaaga
      241 aatggctaaa gccgtccctc gggattggct gcatcgcgct gttgctgatc caggcggcgt
      301 tggcgtggcg gttccttcat gaaaaatggg tggcctagca tggctactgc aaaacgatgt
      361 ctgcaattcg ggccgtaatt gtttaccgcg gtggcgcgat tctgtgggag tggcgtaggc
      421 tgctagcttg attctcgtcg taaagccaat atggacacga cgagagatgg aatggtctcg
      481 gacgggcgag agcggccgac gtaccaggag cttcttgaag aaaatcgccg gcttaaggca
      541 cagttgcgca cggctcaggt tcggatcgag aagctcgaac aacgggtgca gcagttgctg
      601 cgtctggtcg aggagttgca ccgcgcaggc aatcgccagg ccgcgccatt tcgcaagcag
      661 gacgaaccaa cgtccgcacc gaagaagccc ggccgcaagt cgggccggcg tcacgggccg
      721 catgctcacc gcagcattcc accgcggatc gacgagacgt acgacgtgcc gcttccggcc
      781 aagtgtccac actgcggggg ccgggggctg agcgaaatgt acgtcacgac gcaatatcag
      841 acggaaattc cccgcaggct gatctaccgc cagttcgacg tgcacaccgg cacgtgccac
      901 cattgcggcc gcagggtgca aggacgacac gtcttgcaga cctcgaccgc gcgcggcgca
      961 gccaccagcc aactggggcc gaacctgcac gctttgttga ccatcctcaa caaacaattg
     1021 ggattgtcgc acggcaagag cgtgaaactg ctggcgacga tgttcgaggg actgcatatc
     1081 gcccgggcca cgagcatccg ctcgatccag cgcacagccg cgcgctgccg ggcagcttac
     1141 caccgattgc gacaggatgt tcgtggcgcg tcggaggtcg cgccggacga aacgggttgg
     1201 cgcgtggccg gtcgctcggc ctggttgcac gccttcgtca gctcgcgtgc gacctgttac
     1261 gtcatcgatc cgacgcgcag tcaagctccg gccgaagcgt tgctgggtct cgattggccg
     1321 ggcacgctgg tgcacgacgg ctggagcgtg tatgaccagt tcaaacgggc gtttcatcaa
     1381 caatgcgtgc gccacttgca gcgtcgttgc caagccttgc tgccgacggc cgtggggggc
     1441 gccgtgcgtt tgccacgcgc cgtgctcgga ctgatcgacc gcgcttacgc cttgcgccgc
     1501 gcgtggcgtg gccatcggct gagcggcgac cgacttgccg aacagggctt ggagctggca
     1561 tgcgaattgg aaatgctcgc agaaggccgc ttcacgtatg aacccaatcg ccgcctggcc
     1621 aagcacattt tcaagcatgc gatccattgg ttctggtttc tgatcgatcc ggcgatcgcg
     1681 gccacaaact atcgagccga gcaagcactt cgtccggcgg tcgtgaaccg caaagtctgg
     1741 ggcggcaacc gcacctggta cggcgcagcc tgtcaaagca tcctgatgtc cgtgctgcgc
     1801 acctgcgagc aacgctcggt cagtcccttc gcctttctgc tcgacgtcct ctgcagaact
     1861 aagccacaac tcgtcctcgc ctgagacggt aatcaatcac gaattgagat ggatcatctt
     1921 tctccccgga atcgtctcca cctccaccgc cccctcctcc tcctccactt ccgctgtcat
     1981 tgccttcggc gccacttgga tccaatccag ttcgatcaat gaaattggtc gggctattac
     2041 cgacataccg atacaggttt gcatcgcccg cggcatatcc caacggatct tggctcaacc
     2101 agcggccaag gctggcgtca taccaacgtt cgtgattgta ctgaaggccc gcttgtccat
     2161 caaaatactg ccctgcgtag agataatgcg tgagggtcgt gtctcctgcg aggaccttgc
     2221 caaaactgtc atagaggtaa tggctcactt cattgccact ggcgtcgatc aaatcacgaa
     2281 ctgtgccttc gttgtcggca agtgcccagt acacgcgatc tggattagag agcgatacag
     2341 tcccgccccc gggcgccaca ttc
//
LOCUS       DATAVD010001914         1544 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_184346, whole genome shotgun sequence.
ACCESSION   DATAVD010001914 DATAVD010000000
VERSION     DATAVD010001914.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184346"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..637
                     /locus_tag="VHX39_36450"
     CDS             <1..637
                     /locus_tag="VHX39_36450"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX3996693.1"
                     /translation="AADLLPPVTPSKIVCVGRNYREHARELGNEIPAEPLLFFKPPSS
                     LLASGRAIRLPALSTRVDFEGELALVIARRVRRLLPEHRWRDVVRGFTLANDVSARDL
                     QKKDVQWTRAKGFDTFCPAGPLVSDEIDLDAGLMIETRLNGELRQRGSTLDFIFPVPE
                     LLSAITAAITLEPGDLVLTGTPSGVGPLAPGDRVEVSIAGLGVLTNTVEGE"
     gene            745..>1544
                     /gene="tal"
                     /locus_tag="VHX39_36455"
     CDS             745..>1544
                     /gene="tal"
                     /locus_tag="VHX39_36455"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEX3996694.1"
                     /translation="MPQNLLEQLRQYTVVVADTGDIEAMEEFRPQDATTNPSLITTAA
                     QMPQYQPIVDGVLMDAHKELGDGASDKDVANLAFKRLAIAFGKKILAIVPGRVSTEVD
                     ARLSYDTEATLAQARSIIDLYKKEGIGRDRVLVKIASTWEGIRAAEVLEKEGIHCNMT
                     LLFGMHQAIAAADAGVTLISPFVGRILDWYKKDTGKDFHGAGDPGVQSVTKIYNYFKK
                     FGYKTVVMGASFRNLGEITELAGCDLLTISPQFLAELEKTEGDLPRKL"
BASE COUNT          304 a          493 c          476 g          271 t
ORIGIN      
        1 cgcggccgac ctgctgccgc cggtgacgcc ctcgaagatc gtttgcgtcg gccggaacta
       61 ccgcgagcat gcgcgcgaac tgggcaatga gataccggcc gagccgttgc tcttcttcaa
      121 gccgccgtcg tcgctgctgg catcgggccg cgccattcgg ctgccggcgc tctccacgcg
      181 cgtggatttc gaaggcgagc tggcgctggt gatcgctcgc cgcgtccgca ggctcctgcc
      241 tgaacacaga tggcgcgatg tggtgcgggg cttcaccctc gccaatgacg tctctgcccg
      301 cgatttgcag aaaaaggacg tgcaatggac gcgggccaaa ggcttcgaca cattttgccc
      361 ggccggaccg ctggtaagcg acgagatcga cctcgatgcc ggcctcatga tcgaaacccg
      421 cctgaacggc gagctccggc agcgcggctc cacgctggat ttcatctttc ccgttccaga
      481 gctgctcagt gccattaccg ccgccatcac actcgaaccg ggcgatctgg tcctcaccgg
      541 cacgccctcc ggcgtgggtc cgctcgcgcc cggtgaccgc gtggaggtaa gcattgccgg
      601 cctgggcgtg ctgaccaata cggtagaggg cgagtgaacc gcggggccgc aatctgtaac
      661 cggcccttcc tcgccgcatc ttaagaagag ttacactggt gccgtagggc gtcagccggg
      721 tcccgaatcc ccgaggagga aatcatgccg caaaatctac ttgaacagtt gcgccagtac
      781 acggtggtcg tggccgatac aggcgacatc gaggcgatgg aggagttccg tccccaggat
      841 gcaaccacca acccctcgct gatcacgacc gcagcgcaaa tgccgcagta tcagccgatt
      901 gtggacggcg tgctgatgga tgcgcacaag gagctgggcg acggcgcctc ggacaaagac
      961 gtggccaacc tggccttcaa gcggctcgcg atcgccttcg gcaagaaaat tctggccatt
     1021 gtgcccggac gcgtatccac cgaagtggac gcacgcctct cctacgacac ggaggctacc
     1081 ctcgcacagg cgcgcagcat catcgatctc tataagaagg agggcattgg ccgcgaccgc
     1141 gtgctggtca agatcgcctc cacctgggag ggcattcgcg ccgccgaagt gctggagaag
     1201 gaaggcattc actgcaacat gacgctgctg ttcggaatgc accaggcaat tgccgcagcc
     1261 gatgccggcg taacgctgat ttccccgttc gtgggccgca tcctggactg gtacaagaaa
     1321 gacaccggca aggactttca cggcgctggc gatcccggcg tgcagtcggt gaccaagatc
     1381 tataactatt tcaaaaaatt cggctacaag accgtggtga tgggcgcgag cttccgcaac
     1441 ctcggtgaaa ttacggagtt ggccggatgc gacctgctca ccatctcgcc gcaatttctt
     1501 gcggagcttg aaaagaccga gggcgacctg ccgcgcaagc tcga
//
LOCUS       DATAVD010001915         2255 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_184436, whole genome shotgun sequence.
ACCESSION   DATAVD010001915 DATAVD010000000
VERSION     DATAVD010001915.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2255
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184436"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(31..1398)
                     /locus_tag="VHX39_36460"
     CDS             complement(31..1398)
                     /locus_tag="VHX39_36460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007434965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HEX3996695.1"
                     /translation="MSQEIRLLSTSAILGYGFPEASLQAGLDRRPDVIGVDGGSVDPG
                     PHYLGSGKPFCSPIAIRRDLRLMLNAAVRAGIPLVIGTCGGAGGAPHLDLVAGMAREI
                     AQEDGLHFKMALIQAEQDKASLKRRVAAGRVTPLVRQPVLTDATIDGSSRVVAMMGPE
                     PFVTALDAGAQVVLAGRASDPASWVAAATRAGLPPAPAWYAGKMLECGATPSIPKGHD
                     CLFVTVREDHVECEPTNPARRCTPLSIANHSLHENSSPIHHIEPGGMLDTSDCRFEAV
                     SDRAVRISGMRWNPAERYTVKLEGVALAGYRSVCVCGTRDPLLIGRLDDFIASVRGEV
                     AAKAAAFGASPDSYQLGIRVYGRDGVMAAREPLRDMIPHELGFVLEVVSQVSQEMASA
                     VLGMARTNMLHTDFPGRLCREGNMAFPFSPSDIEVGPVYRFSVYHVAELDDPVEPFPI
                     HYEAL"
     gene            complement(1477..1821)
                     /locus_tag="VHX39_36465"
     CDS             complement(1477..1821)
                     /locus_tag="VHX39_36465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012568273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HEX3996696.1"
                     /translation="MAKKERIVRASAEAIQAMRDHGESRSDWHAAEGLSQAEVERLAE
                     EDDGPLPDGWETTVEIGVPEPATPVHIRLDSHVLRWFKASGPGYQTRINAVLRSFVQA
                     RERAETVERKSK"
     gene            complement(1784..2053)
                     /locus_tag="VHX39_36470"
     CDS             complement(1784..2053)
                     /locus_tag="VHX39_36470"
                     /inference="COORDINATES: protein motif:HMM:NF016268.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HEX3996697.1"
                     /translation="MVFEWDETKREVNRDKHKLDLIDGQYLFDGRPVVSFPSSRGDEA
                     RFVTVGPIGPKFYAVVWTERSGATRLISFRRARDGEERAYRARFG"
     gene            complement(2113..>2255)
                     /locus_tag="VHX39_36475"
     CDS             complement(2113..>2255)
                     /locus_tag="VHX39_36475"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEX3996698.1"
                     /translation="FDFLKRTTFVSATKGGLDAIGPAGVALAEAEGLQAHARSIALRL
                     GG"
BASE COUNT          432 a          815 c          631 g          377 t
ORIGIN      
        1 actttcgcga catctttcag cagcgccatg tcacaacgcc tcataatgaa tggggaacgg
       61 ctccaccgga tcgtccagtt cggcgacgtg atacacactg aaccggtaga ccggtccgac
      121 ttcgatgtcc gaaggtgaga acgggaatgc catgttgccc tcccggcaca accggcccgg
      181 aaaatcggta tgcagcatgt tggtccgagc catgcccaga acggcgctgg ccatttcctg
      241 gctcacctgg gaaacgactt ccagaacaaa ccccaactca tgcggaatca tatcgcgcaa
      301 cggttcccga gcggccatga cgccatcacg tccgtagaca cgaatgccaa gctggtaact
      361 atccggagat gcaccgaacg ccgccgcttt cgcagcaacc tcaccacgga cactggcgat
      421 aaaatcgtcc agccgcccga tcagcagcgg atcgcgcgtg ccgcagacgc ataccgaccg
      481 gtacccggcc agcgcgacgc cttccagctt aactgtatac cgctccgccg gattccaccg
      541 catgccggat atccgcaccg cacggtcgct gaccgcctcg aaccggcaat cggatgtgtc
      601 cagcatcccg cccggctcga tatggtggat cggactgctg ttttcatgta gcgagtggtt
      661 ggcgatcgac agcggcgtgc aacgacgcgc cggattggtc ggctcgcatt cgacatggtc
      721 ctcgcgtacc gtaacgaaca ggcagtcgtg tcccttcggg atcgacggcg tggccccgca
      781 ttccagcatc ttgccggcat accaggccgg ggcagggggc agccccgccc gcgtcgccgc
      841 cgccacccac gatgccggat cgctcgcccg cccggccagc accacctgcg ccccggcatc
      901 cagggccgta acgaacggtt ccggccccat catcgccacc acgcggctgg aaccgtcgat
      961 cgttgcatcc gtcaacaccg gctgccgcac caacggagtc acccggcccg ccgcgacacg
     1021 tcgcttcaac gacgccttgt cctgttcggc ctggatcagc gccatcttga agtgcagccc
     1081 gtcctcctgg gcgatctccc gcgccatgcc ggccaccagg tcgagatgcg gcgccccgcc
     1141 agccccgcca cacgtcccga tcaccagcgg aatccccgcc cgcaccgccg cgttcagcat
     1201 cagccgcaaa tcgcgccgga tcgcgatggg ggaacagaac ggcttgcccg accccaggta
     1261 atgcggcccc ggatcgacgc tgccgccatc cacgccgatc acatccggcc gacgatcgag
     1321 acccgcctgc agcgaggcct cggggaaccc gtagccaagg atcgcgctgg tagacagcag
     1381 gcggatttcc tggctcatgc ggcgggctca gtgtctggca ttgcaatttc ctcctacgga
     1441 gggaatgcac tgatcgcgcc caacgggcaa gcgcggctat tttgatttgc gctccacggt
     1501 ctcggcacgt tcgcgcgcct ggacgaatga acgcaggacg gcgttgatcc gggtctgata
     1561 gccgggaccg ctggccttga accagcgcag cacgtgggaa tccagacgaa tatggaccgg
     1621 tgtcgccggt tccggcacgc cgatttccac ggtggtctcc caaccatccg gcaaaggacc
     1681 gtcgtcttcc tcggcgagtc gctcgacctc cgcctggctc agcccttcgg ccgcgtgcca
     1741 gtcggagcgg ctttcgccat ggtcgcgcat cgcctgtatc gcctcagccg aagcgcgcac
     1801 gatacgctct ttcttcgcca tcccgcgccc tcctgaatga gatcagccgc gtggcaccac
     1861 tgcgctcagt ccacacgacg gcatagaatt tcggaccgat cggtccaacc gtcacgaaac
     1921 gggcttcatc gccgcgtgat gacgggaagc tgacgacagg gcgaccatcg aacaggtatt
     1981 gaccatcgat caggtcaagc ttgtgcttgt cgcgattaac ctctcgcttg gtctcgtccc
     2041 attcgaatac cattcacaaa tgtagccaca cctgtgtcgg aattcaagaa ccggaggacg
     2101 ctgcgaaggg cctcacccac ccagccgcaa cgcaatactc cgcgcatgcg cctgcaaccc
     2161 ttcggcctcc gccagcgcca cccccgccgg tccgatcgcg tccaaccccc ccttcgtggc
     2221 cgacacgaac gtcgtccgct tcaggaaatc gaaca
//
LOCUS       DATAVD010001916         5606 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_928806, whole genome shotgun sequence.
ACCESSION   DATAVD010001916 DATAVD010000000
VERSION     DATAVD010001916.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5606
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_928806"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..568
                     /locus_tag="VHX39_36480"
     CDS             <1..568
                     /locus_tag="VHX39_36480"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3996699.1"
                     /translation="YDTQQGSIDVLGYRVSRQPGEALRRLGVVFQARTLDLDLSVIDN
                     LLYHAALHGIGGRDARERALAALRDIELEDRARDAVRKLSGGQMRRVEIARALLHQPR
                     VLVLDEATVGLDVASRAAILRHVRALVSDRGVAVLWATHLLDEVIPEDAVVVLHRGEV
                     LAAGDVGDVAGTDGIRSRFIALTGSAPE"
     gene            565..1395
                     /locus_tag="VHX39_36485"
     CDS             565..1395
                     /locus_tag="VHX39_36485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEX3996700.1"
                     /translation="MTDEVRSGFTASQYLICLRGIAWRESLRFLHQRERFVSALVRPL
                     VWLFIFAAGFRQILGVSIIPPYETYVLYEVYVTPGLMAMIQLFNGMQSSLSMVYDREM
                     GNMRMLLVSPFPRWFLLIGKLLASTMVSILQVYAYLVIAWLWGIRPPVWGYLTVLPAL
                     ALSGMMLGALGMLLSSVIRQLENFAGVMNFVIFPMFFASSALYPLWLLQQSSPVVYFV
                     CRLNPFTYAVELIRFALYAKLDVMSLVVVTVMTILFAAGAIVAYDPARGLIARRGGGA
                     "
     gene            complement(1402..2505)
                     /gene="pqqE"
                     /locus_tag="VHX39_36490"
     CDS             complement(1402..2505)
                     /gene="pqqE"
                     /locus_tag="VHX39_36490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006115941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018149 - peptide cross-linking [Evidence
                     IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqE"
                     /protein_id="HEX3996701.1"
                     /translation="MVGVIDPPLGLVAELTHRCPLQCPYCANPVALQKASAELDTATW
                     RRVMEEAAALGVLQLHFSGGEPTVRKDLPELVSAATQLELYSNLITSGVLLDQAMLDR
                     LARAGLDHVQISFQDTEPKNADRIGGFAGGHARKLAVAQAVQQSGLALTLNFVVHRQN
                     LSRVPDMIDLAEMLGAGRVEIAHVQYYGWALANRDALLPDRAELDGATATVEAARQRL
                     KGRLVIDYVVPDYHALRPKACMGGWARRFITVTPAGKALPCHIAESLPGLEIPSVNEQ
                     SLATIWHDSSAFARFRGTDWMPEPCRSCDRREIDWGGCRCQAFALTGDASRTDPACEK
                     SPDHALMQAAVAARSTTPPEFIYRRYAGVADAL"
     gene            complement(2493..2771)
                     /gene="pqqD"
                     /locus_tag="VHX39_36495"
     CDS             complement(2493..2771)
                     /gene="pqqD"
                     /locus_tag="VHX39_36495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis peptide
                     chaperone PqqD"
                     /protein_id="HEX3996702.1"
                     /translation="MTDEAAIPSLAAGVKFRFDKLRDAWVVLAPERLFLPDEQAVEIL
                     KLVDGTQSLGAIIAGLAARFDAPRAMIAEDVSTMLQDLADKGVVQWSA"
     gene            complement(2768..3505)
                     /gene="pqqC"
                     /locus_tag="VHX39_36500"
     CDS             complement(2768..3505)
                     /gene="pqqC"
                     /locus_tag="VHX39_36500"
                     /EC_number="1.3.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003616805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline-quinone synthase PqqC"
                     /protein_id="HEX3996703.1"
                     /translation="MTVETMSPDQLEAALKQIGAERYHSLHPFHKLMYQGKLNRAQLQ
                     AWALNRYYYQCRIPAKDATLIARLPTADLRRAWRRRLHDHDGDEPNSGGIERWLRLTD
                     GLGLDRNYVISTAGLLPITRFAVDAYVDIVRDRSILEGIASCLTELFSPTIIAERVGG
                     MLANYDFITADTLGYFTPRLDQAPMDAEFALDYVKQHARTPEQQEAVLAVLRTKCDIL
                     WAMLDALHLAYVEPGMIPPGAFVPTGR"
     gene            complement(3502..4422)
                     /gene="pqqB"
                     /locus_tag="VHX39_36505"
     CDS             complement(3502..4422)
                     /gene="pqqB"
                     /locus_tag="VHX39_36505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011632629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqB"
                     /protein_id="HEX3996704.1"
                     /translation="MRAHVLGAAAGGGFPQWNSNAAGCRRARSGDRSAVPRTQASLAV
                     SADGLHWFLLNASPDLRQQIEASPCLQPSYGLRSSPIAGVVLTGGDVDAIAGLLTLRE
                     RQAFTVYATARIHDVLDANPIFEVLARDMVQRQRVTIGTSFRLTLPDGKPSGLSLELF
                     AVPGKVPLYLEHSATAPSIVESEDTVGALVTDGRRRLFFIPGCAGMTVALAQRLKGAD
                     VVLFDGTLWTDDEMLRAGIGSKTGLRMGHMSVSGTNGTIEAFQRIDVGRKVLLHINNS
                     NPILLDDSPERAAVEAAGWEVAYDGMEIRL"
     gene            complement(4458..4553)
                     /gene="pqqA"
                     /locus_tag="VHX39_36510"
     CDS             complement(4458..4553)
                     /gene="pqqA"
                     /locus_tag="VHX39_36510"
                     /inference="COORDINATES: protein motif:HMM:NF001400.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone precursor peptide PqqA"
                     /protein_id="HEX3996705.1"
                     /translation="MEERPMSWKTPKIIEIALGAEINCYACAELT"
     gene            complement(4806..5468)
                     /locus_tag="VHX39_36515"
     CDS             complement(4806..5468)
                     /locus_tag="VHX39_36515"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3996706.1"
                     /translation="MMLRLHVESKSFRTATGDTLPVLGRIDLALGRREIVALVGPSGC
                     GKTTLLRIAGVLDTDYQGSIEWASGAMPRIGTVFQEPRLLPWRTVLENLLLAQRVRDR
                     SLAARLLDTLDLTAFQDAYPATLSLGMARRVAIARAFVIEPELILLDEPFVSLDPASA
                     DRSRELLLTAWRTRPTAALLVTHDREEAAALSDRILLLGSRPTQVLEELIVPISARRQ
                     IS"
BASE COUNT         1072 a         1727 c         1671 g         1136 t
ORIGIN      
        1 ctacgatacg caacaaggtt cgatcgatgt actgggctat cgcgtgtcgc gccaacccgg
       61 ggaggccctc cgccgactgg gcgttgtgtt ccaggcgcga acgctcgatc ttgacctctc
      121 cgtcatcgac aatctgctgt atcacgcggc cctgcacggt atcggcgggc gtgacgcacg
      181 cgagcgcgcg ctcgccgcgt tgcgcgacat cgaactggaa gaccgggcac gcgacgccgt
      241 gcgcaaacta tctggtggac agatgcgccg ggtcgagatt gcccgagcac tgctgcacca
      301 gccacgggtc ctggtgctcg atgaggccac agtcgggctc gatgtcgcgt cccgggcggc
      361 tatcctgcgg catgtccgcg cgttggtgag cgatcgtggg gtcgctgtgc tttgggcgac
      421 acatttgctc gacgaggtga tccccgaaga cgccgttgtc gtgctgcacc gcggcgaggt
      481 gctggctgcg ggcgatgtcg gggatgtcgc cggcaccgac ggcatccgca gcaggtttat
      541 tgccttaacc ggcagcgcgc cggaatgacc gacgaggttc ggtcaggctt caccgccagc
      601 cagtatctca tttgccttcg cggcatcgcc tggcgcgagt cgttgcgctt tctgcaccag
      661 cgtgagcgtt tcgtttctgc actggtccgt cccttggttt ggttgttcat tttcgccgcc
      721 ggatttcgcc agattctcgg cgtatcgatt attccgcctt acgaaaccta cgttttgtat
      781 gaggtctacg tcacgccggg attgatggcg atgatccagt tattcaacgg tatgcaatcc
      841 tcgctttcga tggtttacga tcgggagatg ggcaacatgc gcatgctgct ggtcagtcca
      901 tttccacgct ggttcctgct gatcggcaaa ctgctggcga gcaccatggt ttcgatctta
      961 caggtttacg catacctggt gattgcctgg ctttggggga tccggccgcc tgtgtggggt
     1021 tatctcaccg tgctccccgc gctggcattg tcgggcatga tgctgggtgc gctcggtatg
     1081 ctgctgtcgt cggtgatccg gcagttggag aattttgccg gcgtgatgaa cttcgtaatt
     1141 tttccaatgt ttttcgcttc gtcggcgctg tatccattat ggctgttgca gcaatcaagc
     1201 ccagtcgtct acttcgtttg ccgactcaat cctttcacct acgccgtgga gctaattcgt
     1261 ttcgcgttgt atgcgaaact cgacgtgatg tcgctcgtcg tagtcacggt catgacaatc
     1321 ctgttcgccg ccggcgcaat cgtcgcttac gacccggcgc gcggtctaat cgcacgtcgc
     1381 ggcggtggcg cgtgatggcc gctacaaggc atcagccaca cctgcgtaac gtcgatagat
     1441 gaactccggc ggcgtggtgc tgcgcgccgc cacggccgct tgcatcagcg cgtggtccgg
     1501 cgatttctcg cacgccgggt cggtacgtga cgcatctccg gtcagagcaa acgcctgaca
     1561 acggcagcca ccccagtcga tctcgcgccg atcgcatgac cggcacggct ccggcatcca
     1621 gtcggtgccg cggaaacgag cgaacgccga cgaatcatgc catatcgttg ccagcgattg
     1681 ctcgttcacc gaggggatct cgagacccgg gagcgattcg gcgatgtggc aaggcaacgc
     1741 cttacctgcc ggcgtcacgg ttatgaaccg cctggcccaa ccgcccatgc acgccttcgg
     1801 tcgcaatgcg tgataatcgg gcacgacata gtcgatgacc agccggcctt taagtcgctg
     1861 acgtgccgcc tccacagtgg ccgttgcacc atccagttcg gcacgatccg gcaatagcgc
     1921 atctcgattg gccagtgccc atccgtaata ttgcacatgg gcaatttcca cgcgaccggc
     1981 ccccaacatc tccgccaaat caatcatgtc cgggacgcgg ctgaggttct gccggtgcac
     2041 gacaaaattc aacgtcagcg caaggcccga ttgttgcaca gcctgcgcca ccgccagctt
     2101 ccgtgcgtgg ccgccggcaa atccaccgat gcggtcggcg tttttgggct cggtgtcctg
     2161 gaagctgatc tgcacgtgat cgaggccggc tcgggccagc ctgtccagca tcgcctggtc
     2221 cagcagcacc cccgacgtaa ttaggttgct gtacagttca agctgcgtcg cggcgctgac
     2281 cagttccggc aaatccttgc gcactgtcgg ttcaccgccg gaaaaatgca gttgtaagac
     2341 tcccagagca gccgcctcct ccatcacgcg ccgccatgtt gcggtatcca gttcggcgct
     2401 ggctttttgt aatgcgactg ggttggcaca atacgggcat tgcaatgggc agcgatgcgt
     2461 caattccgcc accaggccta gcgggggatc gatcacgccg accactgcac gactcccttg
     2521 tcggcaaggt cttgcaacat ggtgctgacg tcctcggcaa tcattgcacg cggcgcatcg
     2581 aaacgggctg ccaggccggc aatgatcgcg cccagactct gggtaccatc gaccaattta
     2641 agaatctcga cggcttgttc gtcgggtagg aacagccgtt caggcgctaa cacgacccac
     2701 gcatcgcgca gcttgtcaaa gcgaaacttt acgcccgctg ccagcgaagg aatggcggcc
     2761 tcgtcggtca cctgccggtc ggcacaaacg cgccgggggg aatcattccc ggctcgacat
     2821 aagccagatg caacgcgtca agcatagccc agagaatgtc gcacttggta cgcaggacag
     2881 ccagcactgc ctcctgttgt tccggcgtgc gcgcgtgttg tttgacgtag tcgagcgcga
     2941 attcggcatc catcggcgcc tgatccaacc gcggcgtaaa atagccaagt gtgtcggcgg
     3001 taatgaaatc atagttcgcc aacatgccgc caacgcgctc ggcaatgatc gtcggcgaga
     3061 acagctccgt cagacacgac gcgatgcctt ccaggatcga ccggtctcgc acgatatcga
     3121 cataggcatc gacagcaaac cgagtaatcg gcagtaagcc cgcggtggaa atcacatagt
     3181 tgcgatccag tcccagaccg tcggttaggc ggagccagcg ctcgatgcca ccggagttcg
     3241 gttcatctcc gtcgtgatca tgcagccgcc gccgccaagc gcgacgcagg tcggctgtcg
     3301 gcagacgggc gattaatgtc gcgtcttttg cagggatacg gcattggtag tagtagcggt
     3361 tcaaagccca ggcctggagt tgtgcgcgat tcaacttgcc ctggtacatc agtttatgaa
     3421 atggatgcag cgaatggtac cgttccgcac caatttgctt cagcgcggct tcaagctggt
     3481 caggcgacat tgtctcgacg gtcataaccg gatctccatt ccgtcgtagg ccacctccca
     3541 tcccgccgcc tccaccgctg cccgttcggg cgagtcatcc agcaggatcg ggttggaatt
     3601 gttaatgtgc aacaggacct tgcggcccac atcgatgcgt tggaaagcct cgatcgtgcc
     3661 attcgttccg ctgacgctca tgtgacccat gcgcaggccg gtcttgctgc cgataccggc
     3721 gcgcaacatt tcgtcgtccg tccacagtgt gccgtcaaat aacacgacgt cggcaccttt
     3781 cagacgttgc gctagtgcga cggtcatgcc tgcacaacca gggatgaaaa acaatcggcg
     3841 tcgtccatca gtaaccaagg cgccgaccgt gtcttcactt tcgacaatcg agggcgctgt
     3901 cgcggaatgc tcaagataga gcggaacctt cccggggact gcgaacaatt ccaatgacag
     3961 tccgctgggt ttgccgtccg gtaacgtcag ccggaacgaa gtaccgatcg tgacgcgctg
     4021 gcgctgcacc atgtcgcgcg ccagaacctc aaaaattggg tttgcgtcca gcacgtcgtg
     4081 gattcgcgcc gtggcgtaga cggtgaatgc ctgcctctca cgcaaggtca gcagtccggc
     4141 aatcgcatcc acgtccccgc cggtcaggac aacacccgct atcggcgagg agcgtaatcc
     4201 gtagcttggc tgcagacatg gtgaggcctc gatctgctgg cgcaaatcgg gcgacgcgtt
     4261 tagaaggaac caatggagtc cgtcggcgct gaccgcaagg gacgcctggg tacggggcac
     4321 cgcacttcgg tcgcccgatc gggctcgcct gcaccctgcc gcgttagagt tccattgcgg
     4381 aaaccccccg cctgctgccg cgcccagaac gtgcgctcgc atggaccgac cgcgccgcga
     4441 aacaggcgcg aaggcggtta cgtcagttca gcgcaggcgt agcagttgat ctcggcgcca
     4501 agcgcgattt cgatgatctt cggggttttc cagctcatag gccgttcctc cacggtgcat
     4561 tcctcatctt cccattagtt tacccgatgc ccttgaactg tcaagttacg gggcgacgcg
     4621 gcatcagatc gttacgccgc ctcacggtga tggccgaacg atgatcgaag gtgcgatgca
     4681 gcgtatcatc gggattggcg cctcagtgct gctggcttgt ggtctggttc gcgaggcaat
     4741 ggcacaggat tgcggcgacc ttatctccgg gtctcaaccc gccaggtgag gctgcggcag
     4801 caaattcagg agatttgccg ccgcgcagag attggcacga tcagttcctc caacacctgc
     4861 gtcggccgag agcccagaag caagatgcga tcggacagag cggcagcttc ctcgcggtcg
     4921 tgggtgacca gcaatgctgc ggtggggcgc gtgcgccagg ccgtcaacag caattcacga
     4981 ctgcggtccg ctgaggccgg gtcgagcgag acgaacggtt catccaataa tatcagttcc
     5041 ggttcgatga cgaatgcgcg agcgatggcc acgcgccgtg ccatgcccaa cgacaatgtg
     5101 gccggatatg catcctggaa cgcagtcaga tccagggtat cgagcaaccg ggcggccaga
     5161 ctgcgatctc tcacacgctg cgccagcagc agattttcca ggaccgtgcg ccatggcaaa
     5221 agccgcggct cctggaacac tgtgccgatg cggggcatgg cgcccgacgc ccactcgatt
     5281 gagccttgat agtcggtatc cagcacgccg gcgatccgca gcaatgtggt cttgccgcat
     5341 ccggagggac caaccagcgc gacgatctca cgccgtccaa gggccagatc gatccgcccc
     5401 agtaccggca gcgtgtcgcc ggtggcggta cggaaagatt tgctttcgac atgaagccgc
     5461 agcatcatcg ccgccattgc gcagcccaga gttccagggg ttgcaaaacg gcccactcga
     5521 tgatctgaac gacaacaatg aacgccagag tataggccag aatcatcgtg acgtcgaaca
     5581 attgaaaata gatctgaatc tgaaat
//
LOCUS       DATAVD010001917         1727 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_740437, whole genome shotgun sequence.
ACCESSION   DATAVD010001917 DATAVD010000000
VERSION     DATAVD010001917.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_740437"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1410)
                     /locus_tag="VHX39_36520"
     CDS             complement(<1..1410)
                     /locus_tag="VHX39_36520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019013509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine dehydrogenase"
                     /protein_id="HEX3996707.1"
                     /translation="MDLLAELEAADQFVARHIGPTDAEIAAMLQMIGRASLDDAAAAA
                     VPESIRSNQALNLPQPVDEAAVIAELRALASRNVLKKSLIGMGYHGTVTPPVILRNVL
                     ESPGWYTAYTPYQAEIAQGRLEALVNFQTLICELTGMEIANASLLDEATAAAEAMAMA
                     HAISKTKSDVIAVADDVHPQTRSVLTTRASALGIRLGRVGEATPFAVLLQYPGTTGEV
                     RDLTADIAAAHAQGALAIVAADPLAMVALRPPGEMGADVVVGSSQRFGVPMGFGGPHA
                     AFFATRDAFKRHMPGRLVGVSIDAAGEPAMRLALQTREQHIRREKATSNICTAQVLLA
                     VIAGMYAVWHGPDGLRRIARRVGLQARMLADCAIRGGHRIRFARFFDTIVVECADPLA
                     LMGAAREAGFNFRLVDAGAVAIAVDETVTRDDLVALASVLGAPLAGAAAECSLLRTGP
                     FLAQTVFNRYHSEHEMLRYL"
     gene            complement(1413..>1727)
                     /gene="gcvH"
                     /locus_tag="VHX39_36525"
     CDS             complement(1413..>1727)
                     /gene="gcvH"
                     /locus_tag="VHX39_36525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEX3996708.1"
                     /translation="TIGITDHAQQQLGELVFIELPELEREVAAGEACAVVESVKAASD
                     VYAPLAGKIAEINETIVEDPEIVNNDAEGEGWFFRMELDDPATFEELMDQDAYDEFLE
                     TL"
BASE COUNT          339 a          597 c          489 g          302 t
ORIGIN      
        1 cagatagcgc agcatctcat gctcggagtg ataccggttg aacaccgtct gtgccaggaa
       61 cggtccagta cgaagcagcg aacattcggc cgctgcaccc gcgaggggcg cacccaaaac
      121 cgacgccagc gcaaccagat cgtcgcgcgt gacagtctca tcgacagcaa tggccactgc
      181 gccggcatcg acgaggcgga aattgaaccc cgcctcgcgc gcggcgccca tcagcgccaa
      241 cggatcggca cattccacca caatcgtatc gaaaaacctg gcaaaccgga tccggtgtcc
      301 gccacggatc gcacaatccg cgagcatgcg cgcctgcaag ccaaccctgc gcgcaatccg
      361 tcgcagtcca tccgggccgt gccacaccgc gtacatcccg gcgatgaccg ccagcagcac
      421 ctgagcggtg caaatgttgg acgtggcttt ctcacggcgg atatgttgct cgcgagtctg
      481 caacgccagc cgcatggccg gctccccggc ggcatcgatc gatacgccga ccaaccgacc
      541 cggcatatgg cgtttgaacg catcgcgggt ggcgaagaac gccgcatgcg ggccgccgaa
      601 gcccatcggc acaccgaacc tctgtgacga cccgacgaca acatccgccc ccatctcgcc
      661 tggcggacgc aaagccacca tcgccaacgg atccgccgcc acgatcgcca gcgccccttg
      721 cgcatgcgct gccgcaatgt cggctgtcag gtcccgcact tctccggtgg ttcccgggta
      781 ctgcagcaaa accgcgaacg gcgttgcctc gccaacccgg ccgagccgga tacccaaagc
      841 cgaggctcgc gtggtcagca cggatcgggt ctgcgggtgc acgtcatcgg cgaccgcgat
      901 cacgtcggat ttcgttttgc tgatggcatg ggccatcgcc attgcctcgg ccgccgccgt
      961 cgcctcatcc agcagcgagg cgttggcgat ctccatgccg gtcagctcac aaatcagcgt
     1021 ctgaaagttg accaaagcct ccagccggcc ttgcgcgatt tccgcctggt acggcgtata
     1081 agcggtgtac caaccaggac tttccagtac gttgcgaaga atcaccggcg gcgtgaccgt
     1141 gccgtgatac cccatcccga tcagcgactt tttcaaaaca tttcgagatg ccaacgctcg
     1201 cagttcggcg atgaccgctg cttcatcgac cggttgcggt aaattcaacg cctgattgga
     1261 acggatcgac tccggaactg ccgcagcggc ggcatcgtcc aggctggcac ggccgatcat
     1321 ttgcaacatc gcggcgatct cggcatccgt cgggccaata tgccgcgcga caaactgatc
     1381 cgctgcctcg agctccgcga gcagatccat gctcacaacg tctccaggaa ctcgtcgtag
     1441 gcgtcctggt ccatcagttc ctcgaacgtg gcgggatcgt cgagttccat gcggaagaac
     1501 cagccttcgc cttcggcatc gttgttgacg atttcgggat cttccacgat cgtttcgttg
     1561 atttcagcga tcttgccagc cagcggcgca tagacgtcgg aggccgcctt tacgctttcc
     1621 accacggcac aggcctcccc cgcagcgacc tcgcgctcga gttcgggcaa ttcgatgaac
     1681 accagctcgc caagctgctg ttgcgcatga tcggtgatgc cgatggt
//
LOCUS       DATAVD010001918         2800 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2043566, whole genome shotgun sequence.
ACCESSION   DATAVD010001918 DATAVD010000000
VERSION     DATAVD010001918.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2800
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2043566"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..872)
                     /locus_tag="VHX39_36530"
     CDS             complement(<1..872)
                     /locus_tag="VHX39_36530"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: protein motif:HMM:TIGR00675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEX3996709.1"
                     /translation="MTGPDPAALQRLAGGEPPRVLDLFAGAGGLSLGFQRAGFRIDGA
                     VEIDPLAARTHARNFHPEDLARHGVARDITRLEPDESGLDAIDVLVGGPPCQAYARVG
                     RAKLREIADHPSAFKVDPRGNLYLRYLAWVKALRPLALLVENVPDILHYGHHNVVEEM
                     VDALDGLGYDARYSLINSAFHGCPQMRDRVFLVAYRKELGATVRFPAATRFMRLPRGY
                     AGTRAVALKYVDRFGSAGYLAADPGHPGLPGPVTAREAIGDLPPIQGDSVRRGARRFT
                     ELSRYSAADDFSDYV"
     gene            complement(869..1306)
                     /gene="vsr"
                     /locus_tag="VHX39_36535"
     CDS             complement(869..1306)
                     /gene="vsr"
                     /locus_tag="VHX39_36535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008495752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004520 - DNA endonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch endonuclease Vsr"
                     /protein_id="HEX3996710.1"
                     /translation="MSESHLARPVFDDVPPARRRNLAAVGGKDTAPELRVRRLLFRMG
                     YRFRLHRRDLPGTPDIVLSGPRKIVEVRGCFWHRHPDPACRNAVLPKVRADWWAAKLA
                     RNVARDQQNLTALQTAGWSVLVLWECEVRDETALAARLQSFLG"
     gene            complement(1329..2312)
                     /locus_tag="VHX39_36540"
     CDS             complement(1329..2312)
                     /locus_tag="VHX39_36540"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3996711.1"
                     /translation="MLGPVPCISRGANVRGLSLDAQEAERMTITLQESLRGLFYAPFY
                     VALAHDAYAAEGVTVRFVAAPSVGAAATALLAGEIDVAWGGPMRVMQSYHQDPACDLV
                     SFAEVVTRDPFMLVGRGPRPGFSVRDLTGLRLASVSEVPTPWMCLQEDLRRAGVEPGS
                     IERVADRTMAENCAALLAGTVDVVQLFEPFVSGLEADHGCAVWYAQASRGPTSYTTFY
                     TRRSLLTQRRDELQRMVRAIYRTQQWVAAASGDAIAEAVRSFFPDVPPATLVAACARY
                     QDLGIWGRDPVLPRAGYDRLLSSLVSGGLVNPGTAFEVAVDNSIAKAVVAA"
     gene            complement(2322..>2800)
                     /locus_tag="VHX39_36545"
     CDS             complement(2322..>2800)
                     /locus_tag="VHX39_36545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996712.1"
                     /translation="MVEIKVTDNTNGYVEAARLNPGDTGSAARAWCTYNAGPTPENGD
                     VLSHTAMGHATLSVANRTGQLAVVKLRSAAGAVVASVFLDPGGETTVDALPDDPVQLD
                     FATGEVWSRACHSFAAGMRAQRLPGLVSIGNDMQLDIPPDPKAKPVDLSDQAFAQE"
BASE COUNT          571 a         1004 c          804 g          421 t
ORIGIN      
        1 acgtaatcag aaaaatcgtc cgctgctgaa taccgcgaaa gttcggtaaa ccgtcgcgcc
       61 ccgcgccgga ccgaatcgcc ctggatcgga ggtaaatcac cgatcgcctc ccgcgccgtc
      121 accgggccgg gcaaccccgg atggccagga tcggcagcca ggtaacccgc gctgccgaaa
      181 cggtcgacat acttcaacgc aaccgctcgc gtcccggcat aaccccgcgg caatcgcata
      241 aatcgcgttg ccgcgggaaa tcgcaccgtc gcgcccagtt ctttgcgata ggccaccagg
      301 aacacccggt cgcgcatctg cggacagcca tgaaacgcac tattgatcaa agaatatcgt
      361 gcgtcgtagc caagcccatc cagcgcgtcg accatttcct caacgacatt gtgatggccg
      421 taatgcaaga tatccggaac attttccacc agcagcgcca gcggccgcag cgccttgacc
      481 caggccaaat agcgcaaata caggttgccg cgaggatcca ccttgaatgc tgaaggatga
      541 tcggcgatct ctcgcaactt cgcccgcccg acccgcgcgt aagcctggca cggtggcccg
      601 cccaccagaa catcgattgc atcaaggcct gattcatcgg gctccaatcg ggtgatgtcc
      661 cgcgccacac catgcctggc aagatcttcg ggatgaaaat tccgcgcatg cgttcgtgct
      721 gcgagcggat cgatctcaac cgcaccgtca atgcggaatc cggcgcgttg aaagccgagc
      781 gacagcccgc ccgcgccggc aaacaagtcc agcacccgag gcggttcgcc accagccaac
      841 cgctgcagcg cagccggatc cgggccggtc atccgagaaa cgattgcagg cgtgccgcca
      901 gcgccgtttc gtcccgcacc tcgcactccc acaacaccag cacggaccaa cccgccgtct
      961 gcaacgccgt caaattctgc tgatctcgcg caacattgcg cgccagtttc gcagcccacc
     1021 agtcagcccg caccttcggc agcacggcat tgcggcaggc cggatcggga tggcgatgcc
     1081 agaaacaacc gcgcacctcg acgatcttgc gaggcccgga aagcacgata tccggtgtcc
     1141 ccggcaaatc gcgccggtgc agccggaacc gatagcccat ccgaaacaat agccgccgca
     1201 cgcgtaattc cggcgcggta tccttgcctc cgaccgcagc gaggttgcgc cgccgcgccg
     1261 gcggaacgtc atcgaaaaca ggcctggcaa ggtgcgactc ggacattcgg tccaagtcta
     1321 gcccaatctc aggcggcgac caccgccttg gctatactgt tgtccaccgc aacctcaaac
     1381 gccgtgcccg gattgaccag tccgccggac accaggctcg acaacagccg gtcatagccg
     1441 gcccgcggca acaccggatc gcggccccag atgcccaaat cctggtaccg cgcacacgcc
     1501 gccaccaggg tcgccggtgg cacatccgga aaaaacgacc gcaccgcttc ggcgatcgca
     1561 tcaccagacg ctgcggcgac ccattgctgt gtccggtaaa tcgcccgcac catccgctgc
     1621 aactcgtccc gccgctgcgt cagcaacgaa cggcgcgtgt aaaacgtcgt atagctggtc
     1681 ggaccccggc tcgcctgagc gtaccagaca gcacagccgt gatccgcctc aaggcctgac
     1741 acgaatggct cgaacagttg caccacatcg accgtgccgg ccagcagcgc ggcgcaattc
     1801 tccgccatgg tccggtcggc gacccgctcg atcgatccgg gctccacgcc ggcgcgccgc
     1861 agatcttcct gcaggcacat ccacggcgtc ggcacctcgc tgaccgacgc cagacgcaga
     1921 ccggtaaggt cgcgtaccga gaatcccggc cgcggtcccc gcccgaccaa catgaacgga
     1981 tcccgcgtca ccacttcggc aaaactcacg agatcacagg cggggtcctg atggtagctt
     2041 tgcattaccc gcatcggtcc accccaggcg acgtcgatct cgcccgccag cagggcggtc
     2101 gcggccgcgc cgacagaagg cgcggcaaca aagcgaaccg ttacgccttc ggcagcatag
     2161 gcgtcatgcg cgagcgccac ataaaacggc gcataaaaca atccgcgcaa cgattcctgc
     2221 aacgtaatgg tcatccgttc cgcctcctgg gcgtccaatg acaagccgcg cacgttcgcg
     2281 ccgcgactga tgcacgggac aggcccgagc atgacatgga actactcctg cgcgaacgcc
     2341 tggtcggaca aatcgaccgg tttggccttc ggatcgggtg ggatgtccag ctgcatatcg
     2401 ttgccgatcg aaaccaggcc cggcaatcgc tgcgcccgca tgccggcagc gaaactgtga
     2461 caggcgcggc tccacacctc gcccgtggca aagtcgagct gaaccggatc gtccggcagg
     2521 gcgtccaccg tcgtctcccc gcccgggtcc agaaacacgc tggcaacgac ggctccggcg
     2581 gcggagcgga gcttcaccac cgccaattga ccggtccggt tggcgactga cagcgtggcg
     2641 tggcccatcg cggtgtggct cagcacgtcg ccgttctcgg gcgtcgggcc ggcgttgtag
     2701 gtgcaccagg cgcgcgcggc agaaccggtg tcgccggggt tcagccgagc ggcttcgacg
     2761 tacccgttcg tgttgtcggt gaccttgatt tcgaccatcc
//
LOCUS       DATAVD010001919         1896 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1297448, whole genome shotgun sequence.
ACCESSION   DATAVD010001919 DATAVD010000000
VERSION     DATAVD010001919.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1896
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1297448"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1414)
                     /locus_tag="VHX39_36550"
     CDS             complement(<1..1414)
                     /locus_tag="VHX39_36550"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEX3996713.1"
                     /translation="MYLVGVDIGGTFTDCVVIDEQGVVTTAKSPSVPGNFAQGMIDAI
                     GLAAERLGHSREGFFHKISFLSHGTTIGTNAIVEKRGAKVGLITTKGHSDVIHIMRGS
                     RGLDTRNVRAIVHFSESRKPDPIVPKRMIMGVSERVDCLGKVVVRLNEEEVKAAVHRL
                     VAQGVEAIAVCFLWSFLFPDHERRVRDIILSIAPGMFVSCSVDLVAKWGEYERTTAVV
                     LNAYIGPLTSGYLRSLDDQLRVLGYKNPLQITQCGGGTISVEKAKEAPLLTLDSGPVS
                     GVTGSLYLGQVMGHPNIITTDMGGTSFDVGLIHDGKPAHSSVSNVNQYEFFIPKVDIQ
                     AIGAGGGSLARVDPNGPSLRVGPQSAGASPGPVCYGRGGTEPTVTDAALVLGYLDPDN
                     FAGGRMKLNKPAAERAIQVVAKQLDMSLLECASGICKIAEFGMADIIRRTTVGKGHDP
                     RDFVLFAFGGAGPVHAGVFAR"
     gene            1549..>1896
                     /locus_tag="VHX39_36555"
     CDS             1549..>1896
                     /locus_tag="VHX39_36555"
                     /inference="COORDINATES: protein motif:HMM:NF012354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3996714.1"
                     /translation="MNLQDLEVFMEIATLGGFNRAATHLHVAQSALSRRVARLEYEIG
                     TPLLIRNKQGVQLTPAGAILLERSQSLLRHFDQVEAEIKAEASEPRGEVTLGLPPSLL
                     HSASTLLSTLRSRY"
BASE COUNT          396 a          587 c          551 g          362 t
ORIGIN      
        1 cgcgcgcgaa tacgccggcg tgaacaggtc ccgcgccgcc gaatgcgaac aggacgaaat
       61 cgcgcggatc gtgtcccttt cccaccgtcg tccgcctgat gatgtcggcc atgccgaatt
      121 ccgcgatctt gcaaatcccg ctcgcgcatt cgaggaggct catgtccagt tgcttggcta
      181 cgacctgaat ggcgcgctcg gctgcgggct tgttgagctt catgcggccg ccggcgaaat
      241 tgtcgggatc aagatatccc aacacaagtg cggcgtcggt taccgtcggt tccgtgccgc
      301 cgcgcccata acagacgggg cccggtgagg cgcccgcact ctgcggcccg acgcggagcg
      361 aaggcccatt cggatcgacg cgcgccagac tgccgccgcc tgcgccgatg gcctggatat
      421 cgaccttcgg aatgaaaaat tcatattgat ttacgttgct gaccgacgaa tgggcgggct
      481 tgccgtcgtg aataagcccg acatcgaagg atgtcccacc catgtccgtg gtgatgatgt
      541 tcgggtgacc catcacctgc ccgagataca aagaaccggt gacgccggag acaggaccgg
      601 aatccagggt cagcagcggt gcttccttcg ccttctcgac cgagatggtg ccgccgccgc
      661 actgtgtgat ttgcagggga tttttgtagc cgagcactct caactggtcg tccagactgc
      721 gcagatagcc ggacgtcaac gggccgatat acgcattgag gacaaccgcc gtggtgcgct
      781 cgtattcccc ccatttggca accagatcta ccgaacagct cacaaacatc cccggagcaa
      841 tcgaaagaat gatgtcgcga acgcgccgtt cgtgatcggg aaagagaaaa gaccacagga
      901 agcaaaccgc gatggcttcc acaccttggg caaccagacg atgcacggcg gcctttactt
      961 cctcttcgtt gagccgaacg acgactttgc cgaggcagtc gacacgttcc gacacgccca
     1021 tgatcatccg cttgggaacg atggggtccg gttttcggct ctccgagaaa tgtacgatgg
     1081 cccgcacgtt gcgggtatcg agtccacgcg aaccgcgcat aatgtgaatg acgtcgctgt
     1141 ggcctttggt tgtaattagg ccgaccttcg caccgcgctt ctccacgatg gcgttcgtgc
     1201 cgatcgtcgt gccatgcgac aggaacgaaa tcttatggaa gaacccttcg cgcgagtgcc
     1261 ccagccgctc cgcggctagc ccgatggcgt cgatcatgcc ttgtgcgaaa tttccgggaa
     1321 ccgacggtga cttcgccgta gtgaccacgc cctgttcgtc gatgacgaca caatccgtga
     1381 atgttccccc aatatccaca ccaaccagat acatccaaac ggctccaaca ctccgacggc
     1441 ggacggtaac gtgcggagtt tgatcgcggt aatattcatt gtagggtcca cgtatgccga
     1501 tatcagatga ccataagtct ggaaggcgcg cgtcaacagg aagcaccaat gaacctgcag
     1561 gatctggaag ttttcatgga gatcgcgacg ctcggcggtt tcaatcgggc ggcgacccat
     1621 ttgcacgtcg cccagtccgc cctgagccgg cgcgtcgcga ggctggagta tgaaatcggc
     1681 acgccgcttc tcatacgcaa caaacagggc gtgcaactga cgcccgccgg cgccatcctg
     1741 ctcgagcgat cgcaaagtct gcttcgccac ttcgaccaag tcgaagcgga gatcaaagcg
     1801 gaggcgagcg aaccgcgcgg cgaggttacg cttggcctgc cgccttcgtt attgcacagc
     1861 gcgagcacgc tgctctcgac gttgcgctca cgatac
//
LOCUS       DATAVD010001920         8237 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3339912, whole genome shotgun sequence.
ACCESSION   DATAVD010001920 DATAVD010000000
VERSION     DATAVD010001920.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 8237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8237
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3339912"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..496)
                     /locus_tag="VHX39_36560"
     CDS             complement(<1..496)
                     /locus_tag="VHX39_36560"
                     /inference="COORDINATES: protein motif:HMM:NF013482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996715.1"
                     /translation="MNYLDSNLKVIGTRPIRPDGVDKVIGRAVFAADTRAAGMLWGKI
                     KRSPHAHAKILSIDTSAAEALPGVKAVVTAANFPEITSEEAFVGEGPMNFRDLSRNIM
                     ARDKALYEGHAIAAVAAVTQEIASQALDLIDVQYEVLPFVIDVDEAMAPDAPVLHDDL
                     FTTGV"
     gene            complement(638..1936)
                     /locus_tag="VHX39_36565"
     CDS             complement(638..1936)
                     /locus_tag="VHX39_36565"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3996716.1"
                     /translation="MSGIGPSRQLRRMQWVAIILVTAAIALNYMDRSTLAIGNLKIRQ
                     EFGINATAIGALGSAWALTYGLAQLPSGFLLDRIGPKYLVGAAMVLWSLCQAAGGIAS
                     SYVLLMLSRIGLGATEAPCFPSATRSVSDWFAVKDRGTPSGVYTSGAYIGPTLAPPIL
                     TALMLAFDWRVMFIVMGLAGVFAAGLWLLVYRDPRAQVLEPQDEEYLRANREAASSVS
                     LRQWSSLFRFRAMWALMLGAFCTGYITWMYQTWLPAYLEMQQHISIAKTGFLASVPLI
                     SAFFGALAGGWLSDQLVKRGVDQIASRRRPLILGLVASAALTALAANASSAGAAITYI
                     ALSMFFMQFGITCKWILVTVVTPQAYCASAASNQNFAGFLGGTLSPILTGFIVDQTGS
                     FVLALSIGSVITLIGAAIFQFMMTTVIDEGELEKYAVAPA"
     gene            2197..2715
                     /locus_tag="VHX39_36570"
     CDS             2197..2715
                     /locus_tag="VHX39_36570"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02281 family clan AA aspartic protease"
                     /protein_id="HEX3996717.1"
                     /translation="MKAVASLLVSSMLLAPVANAQQSSTAAPSDRRIVLAQGQLPAID
                     RPVQAHETASTMRSNGHFFFDTEVNGTDLHMMFDTGARWVSLRAEDAEKAGINVSSLD
                     YSLHMSTANGISFAAPVVIKVMKVGRITRTNVQAVVVKPGALAIDLLGQSFMSTMAGF
                     STEGDTLILRGN"
     gene            2862..3440
                     /locus_tag="VHX39_36575"
     CDS             2862..3440
                     /locus_tag="VHX39_36575"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02281 family clan AA aspartic protease"
                     /protein_id="HEX3996718.1"
                     /translation="MRGAIVLRVSILLLSAAGAQFARQFVSTSTAPAQSALTDKQIRP
                     TPVQLPSFDRAVQLPAVDRPGRVTPHDIVSTSRFNGNFFFQTEVNGATMPMMFDTGSR
                     WVALRAEDAERAGIDVSSLNFSVHTSTANGVGSAALVTIKVMRVGNITRTNIQAVVMR
                     PGALAINLLGQSFMSTMAGFSTEGDRLTLRGN"
     gene            3499..4167
                     /locus_tag="VHX39_36580"
     CDS             3499..4167
                     /locus_tag="VHX39_36580"
                     /inference="COORDINATES: protein motif:HMM:NF040005.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6134 family protein"
                     /protein_id="HEX3996719.1"
                     /translation="MKPTDSLVIHRRALLATMASAIARPAAAALPVPPGNVLTFRLIR
                     HDDEIGHHTANFEYDGDRLTVRVTVDALVTLVSIPLVRYTHRAVEIWAGDSLLSLTGE
                     TDKNGQHEWVKAQRGPEGVVVTGSKTERYIAPEPAGATSYWNKRTLDGPMISLEDGVL
                     LRPKVVGRPQENIPLASGRTIATQHYNLSGPFNVDLWYDTTGTWAGMAVPIKDGSIVH
                     YERL"
     gene            4175..4741
                     /locus_tag="VHX39_36585"
     CDS             4175..4741
                     /locus_tag="VHX39_36585"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HEX3996720.1"
                     /translation="MTIASFLMAHGSALILPLAIIEGPIVTTIAGFLSAQDYFAWYWA
                     LCLLICGDVIGDLLYYWLGCTAAAPLVRFGTRIGLRCVPSPELQRDLMQNATKMLLIG
                     KWTHSIGFVVLTGSGMLRVPLGQFFLVNLLGTIPKTAVLFGLGYFAGRDYLVFERHAI
                     LIASLLSILGLGFILLIIHRASVSRVRS"
     gene            4738..5952
                     /locus_tag="VHX39_36590"
     CDS             4738..5952
                     /locus_tag="VHX39_36590"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3996721.1"
                     /translation="MRIAVFTDYFFPELGGIQDSIAITARALGRRGHSIDIYAPRYSA
                     GDYRQVNATGREPDLGANVRIHRRLSLPFPSSTRQSRAALPSLLMPAGRAKPDLIHTH
                     SFFGLGFEALLAGAAQRLPVVGTNHTTIAGFGPHIPVSVARAATYVMWYYNRCDQVTA
                     PSRSVFEELGLDRLRRPHRVISNPIDIGLFTPADTTERQRLCTRFGLTDPTITYAGRL
                     GPEKNIEVVLHAVAALSDQGIAADLAIAGHGAHEPMLRAIAADLQIADRVKFVGTLAP
                     DELARLLQISDIFTMMSTSETQSMALLQAMACGVAVVAANSRALPEFVSPDNGVLVEP
                     RDSARLAAAFADLLGSPDRRCRMGAAGRRSVERYGVETVTDEWEMLYRSVLDRGPSRE
                     RAKGDQLRGAGI"
     gene            5909..6658
                     /locus_tag="VHX39_36595"
     CDS             5909..6658
                     /locus_tag="VHX39_36595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEX3996722.1"
                     /translation="MNEQKAISFVVPAYNEEKHLARTLTAILSEIDRSGCNAEVIVVN
                     NASTDGTAEVAAAFPDVIVVNEPEKGLVQARRAGFQRANGKLVANVDADTIVTPGWLD
                     RVLEEFRRHPDLVALSGPYIYYDVSKSARAAVRAFYIMGYGFYILNRFVLRVGSMLQG
                     GNFVVDRAALEQIGGYNPLFSFYGEDTDLARRLHAVGGVKFTFQLPALSSGRRLVEEG
                     LWRIGLRYSMNFVWATFMRRPFTDDWIDVRH"
     gene            complement(6743..8089)
                     /locus_tag="VHX39_36600"
     CDS             complement(6743..8089)
                     /locus_tag="VHX39_36600"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEX3996723.1"
                     /translation="MANETIRLADYAAALRYEDLPPHVIERAKDCITDTVAVIVLGNA
                     LPWSQIICRYAQSIGAGGRSRILGLRGPTLQAPAAALANGTLAHAFESDNLTKPGAGV
                     HPGGTLLPPGLAVAQERGSSGRELITAVVAGFEVMYRIGYATKHSNERHGFHAPGTTG
                     PFGAAVAAGVLLGLDAAQMTNALGIAGSLAGGLMEFARSGTGAMVKRLHLGRASESGV
                     MAASLAADGFTGPSSVLEGEAGFLQVFCTERDVADLTRGLGSEYRTMNLCLKRFPVHM
                     TAQTGVQAILELQEEHGFVGADVDRVTVAGTERMATINNIANPTDMMMAQYSIPFCVA
                     LALFRDPRDPASFDDSALSDAAIRAMCGKVSVVVADPPTRVAGASIVTVQLKNGRSVS
                     KEVEEFNGTPARPLDRVELKDKFMTLMRVRYGAAAGELFERLQGLENETELGWIGA"
BASE COUNT         1580 a         2530 c         2457 g         1670 t
ORIGIN      
        1 cgacacccgt ggtgaacagg tcatcgtgca gcacaggcgc atccggcgcc atcgcctcgt
       61 cgacgtcgat gacgaacggc agcacttcgt attgcacatc gatcaggtcg agcgcctgac
      121 tggcgatctc ctgcgtcacg gcagcgactg ccgctatggc atgaccttca tacagcgcct
      181 tgtcgcgtgc catgatgttg cgcgacagat cgcggaagtt catcgggcct tcgccgacga
      241 acgcctcttc cgaggtgatt tcggggaaat tcgcggccgt tacgacggct ttcacgcctg
      301 gcaacgcctc ggcggcactg gtgtcgatcg acaggatttt ggcgtgcgca tgcgggctgc
      361 gtttgatctt gccccacaac atgccggccg cccgcgtatc ggcggcaaac accgcccgac
      421 cgatgacctt gtccacgcca tccggacgaa tcggtcgcgt gccgataacc ttgagattgg
      481 aatccagata gttcatcagg cggccccttt ggcttgcgga gcgcaaccct ccccgccgag
      541 actgccacct gggcgtttga cgtcggttgc cgcgccgcgc taacagcgaa ccgtcatagc
      601 ctattagata cagcgcgtca ggtcaacgca tggccggtca ggcgggggcg acggcgtatt
      661 tctccagctc gccttcgtca atgaccgtgg tcatcatgaa ctgaaagatt gcggctccaa
      721 tcagcgtaat gaccgacccg atcgatagcg ccaggacgaa ggaaccggtc tgatcgacaa
      781 taaaaccggt caggatcggc gacagcgtgc cgcccagaaa cccggcgaaa ttctgattgc
      841 tggcggccga tgcgcagtac gcctgaggtg tcaccaccgt caccaaaatc catttgcagg
      901 tgatgccgaa ctgcatgaag aacattgaca gcgctatata cgtgatcgcc gctccggcac
      961 tcgatgcgtt tgccgccagc gccgtcaggg cggccgaggc aaccaagccc aggatcaacg
     1021 gccggcgacg actggcgatc tgatccacgc cgcgtttgac caattggtcg gaaagccaac
     1081 ctcctgcgag cgctccgaaa aacgcactga tcagcggcac cgaagccagg aacccggtct
     1141 tggcgatact gatatgctgc tgcatttcaa gataagccgg cagccatgtc tgatacatcc
     1201 aggtgatgta accagtgcaa aacgcgccca gcatcaacgc ccacattgcg cgaaaacgga
     1261 acagcgaact ccattgccgc agcgaaaccg atgacgccgc ctcgcggttg gctcgtaggt
     1321 attcttcgtc ctgcggttcc aatacctgcg ctcgcgggtc acggtagacc agcagccaca
     1381 gccctgcggc aaagacgccg gccagcccca tgacgatgaa catcacgcgc cagtcgaatg
     1441 ccaacatcag ggcggtgagg atcggcggcg cgagcgtggg gccgatatag gcacccgatg
     1501 tgtaaacgcc gctcggtgtg cctcggtctt tgacagcgaa ccagtcgctg actgaacgag
     1561 ttgccgaggg aaagcacggt gcctcggtcg caccgaggcc gatccgtgac agcatcagta
     1621 gaacatagct gctggcaatg ccgccggcgg cctggcacag cgaccacagg accatagccg
     1681 cgcccaccaa atacttcggg ccgattcgat ccagcagaaa ccccgacggc aattgggcga
     1741 gcccgtaggt caacgcccag gctgagccaa gcgcgccgat cgccgtggca ttgatgccga
     1801 actcctggcg gattttcagg ttgccgatcg ccagcgtcga gcggtccatg tagttgagtg
     1861 cgattgccgc agtgaccaaa atgatcgcaa cccactgcat gcgtcgaagc tgacgtgacg
     1921 gtccaatgcc ggacatctta tatcctccca ggtgtgcttc gcccggtcgg aaccgtacgg
     1981 cgttaccaca aggatgccca aggtttccga gatgtcaaac cctggttatt cggctcgact
     2041 tccgcccgtc gcatcctggt aagacgtttg aacattgtcg gcggggctgg tatgctacgg
     2101 caccacgagt tggacgctac ggtaacgatc ggggtcgagc ggtccgtgtg aaaacctggt
     2161 gtattacaac cgccgcgctt gtattggaga gaaattatga aagccgtcgc cagtctgctt
     2221 gtgtcgtcga tgcttttggc acccgttgcg aatgcacagc agtcgtcaac cgccgcgccg
     2281 tctgaccgtc ggatcgttct ggcacagggg caattgcctg cgatcgatcg gccagtccag
     2341 gcccatgaaa ctgcgagcac catgcgtagc aacgggcact tcttcttcga tacggaagtc
     2401 aatggcaccg atcttcatat gatgttcgac accggcgccc gttgggtttc attgcgcgcg
     2461 gaagatgcgg aaaaagccgg gatcaacgtt tcgtcgctcg attattcgct gcatatgtca
     2521 acggccaacg ggatcagctt cgccgcgccg gtggtgatca aggtgatgaa ggtcggccgc
     2581 atcacgcgca ccaatgttca ggccgtggtg gtgaagccgg gtgctctggc aatcgatctg
     2641 ctcggtcaat cattcatgtc cacgatggcg ggcttcagca ccgaagggga cacgctgatc
     2701 ttgcgcggca actgatctcg cacccgccct tcgttgcacg gtgacaattc gtttgaattt
     2761 taccgctcca gctgttacgc ttgtgggctg aacggccttg gtacgacaaa gctcgcgtca
     2821 aacatgcaat taactaacga gcggggaatg ggaaagcaac gatgagaggc gccatcgtcc
     2881 tacgtgtgtc gatcttgctt ctgtccgccg ccggagcgca attcgccaga caattcgtgt
     2941 cgacatccac tgcgccagcg caaagcgcgc tgactgacaa gcaaatccgt ccgaccccgg
     3001 tgcaattgcc ttcgttcgat cgtgctgtgc agttgccggc tgtcgatcgc ccaggccggg
     3061 taaccccaca cgatattgtg agtacgtcgc gtttcaatgg aaacttcttc tttcaaaccg
     3121 aggtcaacgg cgcgactatg ccaatgatgt tcgacacggg ctcccgttgg gttgcgctgc
     3181 gtgcggaaga tgcggaacgc gcgggaattg acgtctcctc gctcaatttt tccgtccata
     3241 catcaacggc caatggcgtc gggtccgctg cgctcgtgac gatcaaggtg atgcgggtcg
     3301 gcaacatcac acgcaccaat atccaggcgg tcgtgatgag acctggcgcg ctggcgatca
     3361 atttgctcgg tcaatcgttc atgtcgacga tggccgggtt cagcactgaa ggcgaccggt
     3421 tgacgttgcg cggcaactga ttcggcgctg cccctcctgg ggttgaagct tctctccgac
     3481 acgtctactc gacgcgccat gaaacctacg gattcgctgg tgatccaccg gcgtgcactg
     3541 ctggcgacca tggcgagtgc catcgcccgc ccagcggcgg ctgcactgcc agttccgcct
     3601 ggtaacgtgc ttacctttcg ccttattcgc cacgacgatg agatcgggca ccacacggca
     3661 aatttcgagt acgacggcga ccgattgacc gtccgggtta cggtggatgc tttggtgacc
     3721 ctcgtctcga tcccgctcgt ccgctacaca caccgcgccg tggagatctg ggctggtgac
     3781 agcttgctga gcctgaccgg ggaaaccgac aagaacggcc aacatgaatg ggtcaaggca
     3841 caacgtggcc cagaaggcgt tgtggtaacc ggcagcaaga ccgagcgtta catcgcaccg
     3901 gaaccggcgg gcgcgacgtc ctactggaac aagcggacgt tggatgggcc gatgatcagt
     3961 ctggaggacg gcgttttgct gcgtccgaaa gtcgtggggc ggccgcagga aaacatcccg
     4021 ctcgcatcag gccgcacaat tgcgacgcag cattacaatc tgagcggtcc gttcaacgtc
     4081 gatctctggt acgacacgac cggcacatgg gctggcatgg cggtgccaat caaggacggc
     4141 tcgatcgtcc attacgagcg gttgtgacca ttctgtgaca atcgccagtt tcctgatggc
     4201 ccatggcagt gcactgattt tgccgctggc gatcatcgag ggaccgatcg tcacgacgat
     4261 cgccggtttc ctgtcggcgc aggattactt cgcctggtac tgggctttat gcctgttgat
     4321 ctgcggcgac gttatcggcg atctgcttta ctactggttg ggctgcaccg ccgcggcacc
     4381 gctcgtccgc ttcggcacgc gcatcggcct gcgctgcgtc cccagtcccg agttgcagcg
     4441 tgacctgatg caaaacgcca ccaaaatgct gctgatcggc aaatggaccc attccattgg
     4501 cttcgtcgtc ttgactggca gcggcatgct gcgtgtgccg ttgggacaat tctttctggt
     4561 caacctgctc ggcacaattc ccaaaaccgc tgtcttgttc ggcctcggtt atttcgccgg
     4621 acgcgattac ctggtcttcg aacgccacgc gatcctgata gccagtcttc tctccattct
     4681 cggactgggc tttatcttgt tgatcatcca ccgcgccagt gtcagccggg tccgttcatg
     4741 aggatcgcgg tcttcaccga ttatttcttt cccgaactgg ggggcatcca ggattccatc
     4801 gccatcacgg cccgtgccct gggcaggcgt ggccacagca tcgacatcta cgcgccgcgc
     4861 tatagtgcgg gcgattatcg ccaggtcaac gccacaggcc gggagcctga tctgggtgcc
     4921 aacgtgcgca ttcaccggcg tctgtcgctg ccatttccga gttcgacgcg acagtcccgt
     4981 gcggcattgc cctcgctatt gatgcctgcg ggacgggcaa aacccgacct catccacacc
     5041 cattcgtttt ttggtctggg cttcgaggcg ctgctggccg gcgcagccca gaggctccct
     5101 gtggtcggca ccaaccacac caccatcgcc gggttcggcc cgcatattcc ggtcagtgtc
     5161 gctcgcgcag cgacttatgt gatgtggtac tacaaccgct gcgatcaggt aacggcgccg
     5221 tcccgctcgg tgttcgagga actcggtctc gaccggctgc gacggccgca tcgggtcatt
     5281 tccaacccga tcgacattgg gctgttcacg ccggcggaca cgaccgaacg tcaaaggtta
     5341 tgcacgcgat ttgggctgac tgatccgacc attacctacg ccggccggct tgggccggag
     5401 aagaatatcg aggtggtttt gcacgccgtg gccgcgctga gtgatcaggg cattgcggct
     5461 gacctggcga tcgccggcca cggcgcgcat gagccgatgc tgcgggcaat cgccgcggat
     5521 ttgcagatcg ccgaccgggt aaaattcgtt ggcacgctgg caccggacga gctcgcgcga
     5581 ttgctacaaa tcagtgacat tttcacgatg atgagcacca gcgaaaccca gagtatggcg
     5641 ctgttgcagg cgatggcctg tggcgtagcc gtggtcgctg cgaacagccg agccttgccg
     5701 gagtttgtaa gcccggacaa tggtgtcctg gtggagccgc gcgattcggc gcgactcgca
     5761 gccgcatttg cagatttgtt gggttcgccg gaccggcggt gccggatggg tgcggccggc
     5821 cgccgctcgg tcgaaagata tggcgttgaa acggtcaccg atgagtggga aatgctctac
     5881 cggtcggtgc ttgacagggg tccatcgcgt gaacgagcaa aaggcgatca gcttcgtggt
     5941 gccggcatat aacgaagaga aacatctggc gaggacattg acggcaattc tttccgaaat
     6001 cgatcgatcc ggctgcaacg ccgaggtcat tgtcgtgaat aatgcaagca ccgacggaac
     6061 cgcggaggta gccgcagctt tccccgatgt cattgtcgtc aacgagccgg agaagggcct
     6121 ggtgcaggca cggcgggccg gatttcagcg cgccaacggc aagttggttg ccaatgtcga
     6181 cgccgatacg atcgtcacgc caggctggtt ggatcgcgtg ctggaggagt tccggcgcca
     6241 tcccgatctg gtcgcactca gtggcccgta tatttattac gatgtatcca aaagcgcccg
     6301 tgccgcggtg cgggcgtttt atatcatggg ttatgggttt tatattctga accggttcgt
     6361 gctgcgcgtc ggttcgatgt tgcaaggtgg caattttgtc gtcgaccggg ctgcactgga
     6421 gcaaatcggc ggctataacc cgttgttcag tttttatggt gaggataccg atctcgcgcg
     6481 acgtctgcat gcggttggcg gcgtgaagtt cacctttcag ctgcccgcat tgtcatcggg
     6541 ccggcggttg gtcgaggaag ggttatggcg gatcggcctg cggtattcga tgaacttcgt
     6601 ttgggcgacg ttcatgcgca ggccatttac cgatgactgg atcgacgtgc ggcactgaac
     6661 cggaaacgat cggctttccg ccggcacgcg ccatcgtaac gcaacagacc ccgttcattg
     6721 acggcgtaac gattgccgtg gtttatgccc caatccagcc gagttcagtc tcattctcca
     6781 ggccttgcag ccgttcgaac aactcgcccg ccgccgcgcc gtaccgaacc cgcatcagcg
     6841 tcatgaattt gtctttcaat tccacccggt ccagtggcct tgccggggtg ccgttgaact
     6901 cctcgacttc cttgctcacc gaccgtccgt ttttcaactg aaccgttacg atactcgccc
     6961 cggccacgcg ggttggcgga tctgccacca cgaccgaaac cttgccgcac atcgcccgga
     7021 ttgccgcgtc gctcagcgca gagtcatcaa acgaggccgg gtcgcgcgga tcacggaaca
     7081 atgccagagc gacacaaaat ggaatggaat actgcgccat catcatgtcg gtcggattgg
     7141 caatgttgtt gatcgtcgcc atccgctcgg tccccgccac cgtcacccga tcgacgtcgg
     7201 cgccgacgaa cccgtgctcc tcctgcaatt ccaaaatcgc ctgcacgccg gtttgtgccg
     7261 tcatatgcac gggaaaccgt ttcaggcaca ggttcattgt cctgtattcg ctgcccaacc
     7321 cgcgggtcag atccgcgaca tcccgttcgg tgcagaacac ttgcaggaac ccggcctcgc
     7381 cttccaacac actgctcggg ccggtgaacc catcggcggc aagcgaggcg gccatcacgc
     7441 cactctccga cgcgcggccc agatgcagcc gtttcaccat cgcaccggtg ccggagcggg
     7501 cgaactccat caggccaccg gccagcgaac cggcaatgcc cagagcattg gtcatctgcg
     7561 ccgcatccag acccagaagc acgcctgccg cgactgcggc gccgaacggg ccggtggtgc
     7621 cgggggcatg gaacccgtgc cgctcgttgc tgtgtttcgt ggcatagccg atgcgataca
     7681 tcacctcgaa tcccgccacg acggcggtga tcaattcgcg cccggaactg ccacgctcct
     7741 gcgccaccgc gagacccggc ggcagtaacg tcccgcccgg atgcacgccg gcaccgggtt
     7801 tggtcagatt gtctgactcg aacgcatggg ccagtgtgcc gttggccaga gccgctgccg
     7861 gcgcctgcaa tgtcggcccg cgcaatccca gaatgcggct gcgcccgcct gcgccgatgc
     7921 tctgggcgta gcggcaaatg atctggctcc agggcagcgc gttgccgagg acaatgactg
     7981 cgacggtatc cgtgatgcag tccttggcgc gttcgatgac atgcggtggc agatcttcgt
     8041 agcgcagggc tgcggcatag tctgcaaggc ggatcgtttc gtttgccatg acgtatccct
     8101 tttgctgccc agggtccgga acgaccatca tcgtgcctgg ctactcgggc ttgcgacgta
     8161 ttgtggtatt gcttcaataa cgctacgttg cagcgagcac accgtggcct ccctgtaaag
     8221 gtccctctgg attgttg
//
LOCUS       DATAVD010001921         2250 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2227747, whole genome shotgun sequence.
ACCESSION   DATAVD010001921 DATAVD010000000
VERSION     DATAVD010001921.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2250
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2227747"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..318)
                     /locus_tag="VHX39_36605"
     CDS             complement(<1..318)
                     /locus_tag="VHX39_36605"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996724.1"
                     /translation="MEFWSTILLSATISAIAAIGLFLQIRNGQMNVGMAVFVGIGGYV
                     SGVLSTKGGLSPALSIAAAILVGFLAGALYAALTLRLHHWFFAVTTLSLTIAAVAAVS
                     QISY"
     gene            complement(332..1204)
                     /locus_tag="VHX39_36610"
     CDS             complement(332..1204)
                     /locus_tag="VHX39_36610"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEX3996725.1"
                     /translation="MLIQQLLNGVLASGIYALYSVGFTMIFGIMGVLNMAHADFGTVA
                     AFAVIWAVASGLAPVQASFVAFVITLAVALLVERLAMRPGRRFHGDAAIEMPLIATIG
                     AGMMLQNAAALIFGNKAIVFPFNLRAYMRIGDFLLSKGLLVSLAVSAVLLTFLEVLVT
                     YTGFGRQVRAVAQNRNAAEIMGINSERVILITFAITAALAGIAGYLVGLSYGLVSPYM
                     AISYAIKGLVAMIVGGVGSLPGAVLGALLIGIVEALTVSQFGSQMRDVGVFVVLMVVL
                     TLRPNGLLRVAASR"
     gene            complement(1198..1929)
                     /locus_tag="VHX39_36615"
     CDS             complement(1198..1929)
                     /locus_tag="VHX39_36615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3996726.1"
                     /translation="MNSQIPALEVRDLSVRYGGVEAVHGVDLLVAKDEAVAVIGANGA
                     GKTSLLRGIMGLVATRAEAICFEGNSIARTRTHAIARAGIGYVPEGRELFPGLTVQEE
                     LLLGGRFLPRRELPAKLDEIFALFPRLRERRGQITRSLSGGEQQMVAIARVLLTNPRL
                     LLLDEPSLGLAPVLQDLVYEALTSLRRTARLPMLLVEQNAHRALALCSRAYVLKLGSV
                     THVADSAVLRGDPVIQAAYLGVEQC"
     gene            complement(1926..>2250)
                     /locus_tag="VHX39_36620"
     CDS             complement(1926..>2250)
                     /locus_tag="VHX39_36620"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3996727.1"
                     /translation="KFPAQLSYGERRRLEIARGMATEPSLFLIDEPAAGSTPAEQLKL
                     ADLIRGIAEEGAAVILVEHHMDLVARASAHVVVVNFGKVLTSGTIAEVRRNPEVITAY
                     LGTAA"
BASE COUNT          517 a          723 c          637 g          373 t
ORIGIN      
        1 atagctgatc tgactgaccg ccgcgaccgc cgcgatggtc agcgaaagcg tggtcactgc
       61 aaagaaccaa tgatgcaggc gcagcgtgag cgcggcgtac agcgcgccag caagaaatcc
      121 caccaatatc gcggcggcga tcgacaaggc cggtgacaag ccgcccttgg tgctgaggac
      181 gcccgagaca tagccgccga tgccgacgaa taccgccatc ccgacattca tctggccgtt
      241 gcggatttgc agaaacaagc cgattgccgc gattgcagag atggttgcgg acagcaggat
      301 cgtcgaccag aattccatcg atacgccgcc cttaccgact tgccgcgacg cgcagcagtc
      361 cgttcggccg aagtgtcagg accaccatca gtacgacgaa cacaccgaca tcacgcatct
      421 gggagccgaa ctggctgacc gtcagcgcct ccacaatgcc gatcaaaagt gcgccaagca
      481 ccgcaccggg caggctgcct acaccaccga caatcatcgc caccaatccc ttaatggcat
      541 acgagattgc catgtatggc gaaaccaacc cgtagctcag cccgacaaga taacccgcga
      601 tccctgccaa cgcagcggta attgcgaagg tgataaggat cactcgctcg ctgtttatcc
      661 ccatgatctc ggcggcgttg cggttctgcg ccacggcgcg aacctgccgg ccaaaacccg
      721 tatatgtaac caggacctca agaaatgtca ggagcacggc ggagacggcc aggctgacga
      781 gcaggccttt ggacaacaga aaatcgccga tccgcatgta ggcgcgcaaa ttgaagggga
      841 acacgatcgc cttgttgccg aagatcagtg cggcagcgtt ttgcaacatc atgccggcgc
      901 caatcgtcgc gattaacggc atctcgatcg ccgcgtcacc gtggaaacga cggcccggcc
      961 gcatcgccag acgctcgacc aacagcgcga ccgcaagtgt gattacgaac gcaacgaacg
     1021 acgcctgcac gggagccagc cctgatgcga cagcccaaat gactgcaaac gccgcaacgg
     1081 tgccgaagtc ggcgtgcgcc atgttcagca cacccatgat accgaaaatc atggtgaacc
     1141 cgaccgagta aagcgcgtag atcccactgg cgagcacgcc attcagcaac tgttgaatca
     1201 gcactgttca actccgagat aggcggcctg aatcacggga tcaccgcgca acaccgcgct
     1261 gtccgccacg tgggtgacgc tgccaagctt cagcacgtat gcgcgtgaac acagcgcgag
     1321 agcccggtgg gcattttgtt ccacaagcag catcggcagg cgcgcggttc gacgtaggga
     1381 cgtgagcgcc tcgtagacca gatcctggag caccggcgcg aggccgaggg acggttcgtc
     1441 cagcagcaac aggcgtggat tcgtcaacag cacccgagca attgcgacca tctgctgctc
     1501 cccgccggat agcgatcggg tgatctggcc gcgccgttct cgcaagcgag gaaacaatgc
     1561 aaagatttca tccaacttcg ctggcagctc tctcctgggc aaaaaccgcc cgccgagaag
     1621 cagctcctcc tgaaccgtaa gacccgggaa tagttcacgc ccttcgggca cgtagccgat
     1681 cccggcacgg gcgatcgcgt gcgttctggt tcgcgcgatg gaattgcctt cgaaacagat
     1741 tgcctccgca cgtgttgcga ccaaacccat aatgccgcgc agtaaactgg tctttcccgc
     1801 accattcgcg ccgatcacag caactgcctc gtctttggcg accaagaggt caacgccatg
     1861 gacggcctcc acgccaccat agcggacgct cagatctcgc acttccagcg cggggatctg
     1921 actgttcacg cagccgttcc aagataggcc gtgattacct cggggttccg acgaacttca
     1981 gcaattgtgc cggatgtcag aactttccca aagttcacaa ccacgacgtg agcggaggcg
     2041 cgtgccacca gatccatgtg atgctcgacc agtatcaccg ccgcgccttc ttcagcgatt
     2101 ccacggatca gatcggccaa tttgagttgc tcggcaggcg ttgagccggc ggcgggttcg
     2161 tcgatgagga acaacgacgg ttccgtcgcc ataccgcgcg cgatttccag ccggcggcgt
     2221 tcgccgtacg acagttgcgc ggggaacttg
//
LOCUS       DATAVD010001922         2621 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1669518, whole genome shotgun sequence.
ACCESSION   DATAVD010001922 DATAVD010000000
VERSION     DATAVD010001922.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2621
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1669518"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..327
                     /locus_tag="VHX39_36625"
     CDS             <1..327
                     /locus_tag="VHX39_36625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996728.1"
                     /translation="WLWMWGPAEARCSSDWLSHTEVGCPNARLVGERRAWPLQPHLAL
                     VENVGVVGDVQRRPDVLLDDDDRDAVAANLLDAPPMLNVLRLACRKRMARTCVRSSED
                     RSWRNV"
     gene            327..1334
                     /locus_tag="VHX39_36630"
     CDS             327..1334
                     /locus_tag="VHX39_36630"
                     /inference="COORDINATES: protein motif:HMM:TIGR00520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEX3996729.1"
                     /translation="MAALLPRVGLILTGGTIDSVGADRLDLAWYIEANKRLGNGELLA
                     QLPELQTIARVQEIPFRRLPSQSLVDSDWLDLGRKIHSIFDQDQADGIVITHGTNTLE
                     ETAYFLNLVLKTEKPVVLVGSMRPSSAVSADGYLNLLNAVRVAADAQSRGRGCLVVMN
                     DTIFNARDVTKNSTYRVGAFESRDLGPLGFADADGKVVYYHQPVRKHTTQTEFDVRTL
                     TSLPRVDVVLSYVNADGVMIEAAAKAGAKGIISAATGAGRPTPAQDQAFDRVRRDHGM
                     VICLCSRVASGRVVRSPGLKRKGFIASDNLQPWKARILLALGLTKTIDADDIQRMFDT
                     Y"
     gene            1386..>2621
                     /locus_tag="VHX39_36635"
     CDS             1386..>2621
                     /locus_tag="VHX39_36635"
                     /inference="COORDINATES: protein motif:HMM:TIGR00857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase family protein"
                     /protein_id="HEX3996730.1"
                     /translation="MKADLVVKNGSIVTPEATLQGGIAIAGGKIVAIGANDTLPDGKQ
                     IIDATGLHILPGLIDAHVHFRDPGVTHKEDFSTGSTAAVCGGITTVIDMPNQIPPTEN
                     AEQVDVKRKIGETKSLCDFAVLGVVHQTNADDILPMAQRGAIGYKIFFGETIGNLPFP
                     DDGMCQVVFPNITKSGVPLCVHAENRQIQHFWTNKLKAEGKNDPVYWESSRPWLCEAE
                     SIAHVMFMAETFGTKLHIVHASTKQAVGMLRDAKARGLRFTGETQPHYLLRVDTDLKD
                     VGPLLKMNPPVRSKEHQDALWKGLLDGAIDMIATDHSPHTLEEKGCDINGRMTKSAIW
                     DCISGFCGVETNVPLLLTQVNKGRMTLNHYAKVQSENVAKVWQMYPKKGAIRLGSDGD
                     LTIVDMTKEATIDPNKLHSK"
BASE COUNT          564 a          767 c          805 g          485 t
ORIGIN      
        1 tggctgtgga tgtggggtcc ggccgaggcg cggtgttcgt ccgactggtt gtcacatacc
       61 gaggtaggct gcccgaatgc gcggctcgtt ggcgagcgcc gtgcctggcc cttgcagccc
      121 caccttgccc tggtcgagaa cgtaggcgtg gtcggcgatg tgcaacgtcg tccggacgtt
      181 ctgctcgacg atgatgatcg tgacgctgtt gcggcgaacc tgctggatgc tcccccgatg
      241 ctgaacgtgt taaggcttgc atgccggaag cggatggcgc gaacctgcgt ccgcagcagc
      301 gaagaccgaa gctggaggaa tgtttgatgg cggcgttgct ccccagggtg ggattgatcc
      361 tcacgggcgg aacgatcgat tcggtggggg ccgatcgcct ggatctcgcc tggtacatcg
      421 aggcgaataa gcgccttggc aacggcgaac tgcttgctca gctgcccgag ctccaaacca
      481 tcgctcgcgt ccaggagata ccgttccgac ggcttccgag ccaatcgttg gtggattccg
      541 attggctaga tctggggcgg aaaattcatt cgatctttga ccaggatcag gcggacggga
      601 ttgtcatcac tcacggaacg aacacgcttg aagagaccgc ctatttcctc aatcttgtgc
      661 tcaagacgga aaagccggtg gtgctggtgg gatcgatgcg accatcatcg gcggtcagcg
      721 cggacggcta tctcaatctg ctcaatgcgg ttcgcgtcgc cgctgacgcg caatcgcgcg
      781 gccgcggctg cctggtggtg atgaacgaca cgatcttcaa cgcgcgcgat gtgacgaaaa
      841 attcgaccta ccgcgtcgga gcgtttgagt cccgcgacct tgggccgctg ggttttgcgg
      901 acgccgacgg aaaggtggtt tactatcatc agcctgtcag aaagcacaca acgcaaaccg
      961 agttcgacgt gcggacattg acctcgttac ctcgggtgga tgtcgttctg tcctacgtca
     1021 atgccgacgg agtcatgatt gaggccgcag ccaaggcggg cgcaaagggt atcatcagcg
     1081 ccgcaaccgg ggccgggcgc cccactcccg cacaggacca agccttcgac cgagtccgcc
     1141 gagaccacgg gatggtcatt tgcctgtgca gccgggtcgc ttccggtcgt gtggtacgga
     1201 gcccaggttt gaaacggaag ggtttcatcg catctgacaa tttgcagccg tggaaggccc
     1261 gaatcctgct tgcacttggg cttacgaaaa ccatcgacgc agacgacatc caacgcatgt
     1321 tcgacaccta ctagcgcgtt gcggcgttca ccgtgctata gccaagacga gaggagagaa
     1381 ggttcatgaa agcggatttg gtagtaaaga atggatcaat cgtcacgcct gaggcgacgc
     1441 tgcaaggcgg cattgccatt gcgggcggca agatcgtggc gatcggcgca aacgacacgc
     1501 tgccggacgg caagcagatc atcgatgcca ccggcctgca tatcctgccc ggcctcatcg
     1561 acgctcatgt tcatttccgc gatcccggtg tgacgcacaa ggaagatttc tcaacggggt
     1621 ccacggccgc cgtatgcggc ggtatcacca ccgtgatcga tatgcccaac caaattccac
     1681 ccaccgaaaa tgccgaacag gtggacgtca agcggaagat cggcgaaacg aagtcgctgt
     1741 gcgacttcgc cgttctcggc gtggttcacc agaccaacgc cgacgacatc ctgccaatgg
     1801 cgcagcgtgg cgcgatcggc tataagatct tcttcggtga aaccatcggc aacctgccgt
     1861 ttccggacga cgggatgtgc caggtggtat ttcccaacat taccaagtcc ggggtgccgc
     1921 tctgtgtcca tgcagagaac cggcaaatcc agcatttctg gaccaacaag ctgaaggccg
     1981 agggaaagaa cgacccggtc tattgggagt cctcgcgccc gtggctgtgc gaggcggaat
     2041 cgatcgcgca cgtcatgttc atggcggaga ctttcggcac caagctgcac atcgttcatg
     2101 cctcgaccaa gcaggcggtg ggaatgctgc gcgacgccaa agcccgcggg ctgcgcttta
     2161 ccggcgaaac ccaaccgcac tatctgctgc gggttgacac cgacctgaaa gacgtcgggc
     2221 cgctcctgaa aatgaacccg ccggtgcgct cgaaagagca ccaggatgct ctatggaagg
     2281 ggctgctgga cggcgcaatc gacatgatcg cgaccgacca ctcgccccac acgctggaag
     2341 aaaagggctg cgacatcaac ggcaggatga ccaaatccgc aatctgggac tgcatctccg
     2401 gattctgcgg cgtcgaaact aacgtgccgc tgctgctgac acaggtcaac aaaggtcgga
     2461 tgacgctgaa ccattacgcc aaagtacaga gcgaaaacgt cgccaaggtc tggcagatgt
     2521 accccaagaa gggtgccatc cggctcggct ccgacggcga tctgacgatc gtcgatatga
     2581 ccaaggaagc gacgatcgat cccaacaagc tgcacagcaa g
//
LOCUS       DATAVD010001923         4601 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1854056, whole genome shotgun sequence.
ACCESSION   DATAVD010001923 DATAVD010000000
VERSION     DATAVD010001923.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4601
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1854056"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..995)
                     /locus_tag="VHX39_36640"
     CDS             complement(63..995)
                     /locus_tag="VHX39_36640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996731.1"
                     /translation="MHPVAGLYPIWKLTQRLEGEDKFLPVLQHVALANKHVHDPVTSP
                     FTLLEFDPMDAEGGMQSKAEYLATDGQGEMAKGAGIEGAKEAYLKAVSRGETNKADHL
                     FLWMWDNMPAGEVFDLLMNVAIPKNGIDDHYFMYPATCWRALETFVDKQYLKVLMRPV
                     VRYVTRFPTTRSYPEIDRLIEEHNLLGRILRQRTSDDETPAIGRLGEALGATDDFKEI
                     PKMMAQALVDGLSLEGAGEALSIGAAGLFMRSLTGNPMDVHMHTSVNIRRWLLKLDGL
                     SLKSKLYLLLSWHMGPEIASTQFRMEPAGAQPDA"
     gene            990..1247
                     /locus_tag="VHX39_36645"
     CDS             990..1247
                     /locus_tag="VHX39_36645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996732.1"
                     /translation="MQRTAMMAGRQVGGTGDREGRSRQHCLDRNAGPQFFQCSIEDFA
                     TRGILDELNQWLYMLRVLDTGMHGELSFVVYLWFAGFSLWF"
     gene            complement(2053..2484)
                     /locus_tag="VHX39_36650"
     CDS             complement(2053..2484)
                     /locus_tag="VHX39_36650"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEX3996733.1"
                     /translation="MIRVVGIDHLSIRVSDYQKSKQFYSRLFAFLGFELSDEYADAIG
                     WTNGKTRFWISPADSTGPRRKYRIGDVGFHHYAFQLRNRKDVDALQSFLRDDLGATIV
                     DPAAEYYDDYYAVFFLDPDGMKLEGMKYGERQARAKRSARK"
     gene            complement(2481..2714)
                     /locus_tag="VHX39_36655"
     CDS             complement(2481..2714)
                     /locus_tag="VHX39_36655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996734.1"
                     /translation="MISLQTGNADIVGENVMMYASDYPHGESVFPESTNIVLGGNSMP
                     AARKHKLLWENPSRFYTEAACNPSAYIGQRSST"
     gene            complement(2904..3023)
                     /locus_tag="VHX39_36660"
     CDS             complement(2904..3023)
                     /locus_tag="VHX39_36660"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3996735.1"
                     /translation="MNCNRGPVIDFAALHDTLRNGRIAGAGRDVFPADPSVAV"
     gene            complement(3211..3411)
                     /locus_tag="VHX39_36665"
     CDS             complement(3211..3411)
                     /locus_tag="VHX39_36665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996736.1"
                     /translation="MPWRKSRAMDLKTLVILAVMWLTIYSAWLTSIVFCSTNDQRRLL
                     IAAAAFFPIGVVHGIGVWFGGW"
     gene            complement(3640..4299)
                     /locus_tag="VHX39_36670"
     CDS             complement(3640..4299)
                     /locus_tag="VHX39_36670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996737.1"
                     /translation="MANPLANRLANPWAASIVSQSGSNAPGTSAPTGQFVEISLEQAT
                     FSTSASSAPSSNQNAAGTNGATMSPANLLQRLASDIQAMLIQAQSSPAASGVTGSTTA
                     KASTQQNAATDLQTLMADIQSAVTQSGTTPSAQTANSNPTAPAGQTEHHHHHHHGGGD
                     DASGASDVANASSNGAVAATGWQQATNPAASSISATDIAQAIQAYGGDSASSAMPALM
                     V"
BASE COUNT          842 a         1349 c         1455 g          955 t
ORIGIN      
        1 atgctctgct tgactgcggc gagcaactcg tcctgggtgc gatgcggcag cgcagcgatc
       61 gcttacgcat ccggctgtgc gccggccggt tccatgcgga actgcgtcga cgcgatttcc
      121 gggcccatgt gccagctaag cagcaagtac agcttgctct tcaggctgag gccgtcgagc
      181 ttcagcagcc agcgccggat gttgacgctg gtgtgcatat gcacatccat cgggttgccg
      241 gtcagggagc gcatgaacag gccggccgcg ccgatcgaca gagcctcacc ggcgccttcg
      301 agggacagac cgtcaaccag cgcctgcgcc atcattttgg ggatttcttt gaagtcgtcg
      361 gtggcaccga gggcctcacc cagtcggccg atggctggcg tctcatcgtc gctggtgcgc
      421 tggcgcagga tacggccgag caggttatgc tcctcgatca gccggtcgat ttctggatag
      481 gaccgggtgg tcgggaagcg cgtaacatag cgaaccaccg gccgcatcag caccttgagg
      541 tactgcttgt cgacgaacgt ctccagagcg cgccagcaag tggccggata catgaagtag
      601 tgatcgtcga tgccgttctt cgggatcgcc acgttcatca gcagatcgaa cacttcgccc
      661 gcgggcatgt tatcccacat ccacaggaac aggtggtcgg ccttgttggt ctcgccgcgg
      721 ctgacggcct tcagatacgc ttccttggcg ccctcgatac cggcgccttt ggccatttcg
      781 ccttgcccgt cggtggcgag gtattcggcc ttcgactgca taccgccttc ggcgtccatt
      841 gggtcgaatt ccagcagtgt gaacgggctg gttaccgggt cgtgcacgtg cttgttggcc
      901 agggcgacgt gctgcaggac gggaaggaac ttgtcctcgc cttccaggcg ctgtgtcagt
      961 ttccagatcg ggtacaggcc ggcgaccgga tgcaacggac cgccatgatg gccgggaggc
     1021 aggtcggagg aacgggtgac cgcgagggcc gaagccgtca gcattgtctc gatcggaatg
     1081 ccggcccgca gtttttccag tgttcgatcg aggatttcgc tacgaggggt atcctcgatg
     1141 aactgaacca atggctctat atgctcaggg tattggacac gggcatgcat ggtgaactct
     1201 ccttcgtcgt ttatctctgg tttgctggtt tcagtctgtg gttctgatgt ggtgccttgg
     1261 cactgcatag ctgtgttgca ctgagcggga ggcctcctgg cctcaaaccg cctgtggctc
     1321 gcattcggga tgtcgtggag gatgggaggc cgttgaccaa cgaaccgtgc ccacaatcgg
     1381 ggcctgcagc taggcggctg acgaggcggt caaggtccaa aggcaaactc ctccagcttt
     1441 ttggcggtcc gccgacacaa cgattttggg aagacctggc caggctccgc ccggtccaac
     1501 cgctagggag ggaggcgcaa caggggggtc ttctcgattt cccggtcatc gtggcgcgtg
     1561 ccgggacggt ttgtcaacgc tgaagagaaa ttcgtcccgt gaccagaagt aaaaatcggt
     1621 cggcaataag ccacgaaggc tcgtcgacga atgtagactg ccatgcggtc ttaacctgtc
     1681 acgatcgccg tgtctcccaa tgactgagta ttcaacaaca cttctggtcg attgggccgc
     1741 agtttgcaca ggtttcggtc ggcaacgcgg cggcgatctc gttgtcgcat cggcataatc
     1801 gtccatttct ggcagggcgt ggagcttggg tgatccagcg gcagggtcac gtcaaatccg
     1861 atcgcacccg tgcagacctt gtcgtgttgc gctgcacgac tccggcgctg tgatccgatc
     1921 acctcgggcc ctgggcgtcg gatgcaacgt aaacgcaaga aattgtgcac cgcaaataac
     1981 cggtcgaccg gtggtgaacc cggccggcgc gaatggcggc ggtaggaccg gtgcggtggc
     2041 ccttcatcct gctcactttc gggccgaccg cttcgcccgc gcctggcgtt cgccgtactt
     2101 catgccctca agtttcatgc catcgggatc cagaaagaac accgcgtaat agtcgtcata
     2161 atattccgct gccggatcaa cgatggtagc accgagatcg tcacgcagaa agctttgcaa
     2221 cgcgtcaaca tctttgcgat tccgtaactg gaatgcgtaa tgatgaaatc ccacatctcc
     2281 aatccggtat ttacgtcgag gcccggtgga gtccgccgga cttatccaga agcgcgtctt
     2341 gccgttggtc cagccgatcg cgtccgcata ctcgtcggat agctcaaatc ccaggaatgc
     2401 gaacaggcga ctgtagaatt gcttcgactt ttgatagtcg ctgactctga tcgacaaatg
     2461 gtcgatcccg acgacgcgta tcatgtgctg ctccgttgcc cgatataagc tgaggggtta
     2521 caggccgctt cggtataaaa gcgggagggg ttttcccaga gcaacttgtg tttccgcgcc
     2581 gccggcatgc tgttcccacc aagcacgata tttgtcgact ccgggaagac actttcgccg
     2641 tgcggataat cggatgcgta catcatcaca ttctctccca cgatgtctgc gttgccggtt
     2701 tgcaaagata tcatgatttt atattcccgc gagaggccga actgcagtta ttgccgtgtc
     2761 gcgcatttcc ggcacccccg aaagcggccg ctcgccacga tcgaaccaca acgcattatc
     2821 gaacgtattc cgcgtctgtt gatccgtgtc tcgcggctgg agccagccgg atgcggcgta
     2881 agcacgcggg cgccagcacc ggctcagacg gcgacggagg ggtcggcggg gaacacgtca
     2941 cggccggcgc cggcgatgcg cccgttgcgg agtgtgtcgt gcagtgcggc aaagtcgatc
     3001 accggccctc ggttgcaatt catcagcacc gcggctgcag catggccaat gtcgtcgcgt
     3061 taatcgtatg ccgcgtcaac gcggtgaggg gcacgtggcc ggatgggatg aatgatgttt
     3121 cgcggggaca cagccggcag cgcctgagcg accaatgggc cgctgcagcg ggccccgttc
     3181 aggcccgaac gacggctttg tcggcaatcc ttaccagccg ccgaaccaaa cgccgatccc
     3241 gtggacaacc ccgatcggaa agaacgccgc ggcggcaatc agcaagcgtc gttggtcgtt
     3301 cgtcgaacag aacacaatgc tggtcagcca tgcagaataa atggtcagcc acatcactgc
     3361 caatataacc agcgtcttca ggtccatcgc tctggattta cgccacggca ttgcctttct
     3421 cccgttaggc ccattattca gcggaccgtc ccaccagaat agcgaaacct tgcgccgagc
     3481 gaaaccgtcg tttggttgaa attagcgtgc cgggcagcgc gctccgatag cggacagcac
     3541 cacgaaccca ccctgggccg ggcggggtgc gccaggttta ttgggcgcta tccgtctgcc
     3601 agcgtgtttg gcgcggacac ggacagccgg tggtcgcgac tacaccatca gtgccggcat
     3661 cgccgatgag gcgctgtcac cgccataggc ctggatcgcc tgtgcgatat ccgtggcgga
     3721 gatcgaggac gcggctgggt tggttgcttg ctgccatcct gtggctgcca cggcgccatt
     3781 tgaagatgcg ttggcgacat cggacgcccc gctcgcgtcg tcaccaccgc cgtggtggtg
     3841 atgatggtga tgctcggtct ggcccgctgg agccgtcggg ttggaattgg cagtctgcgc
     3901 gctcggcgtg gtgccagatt gtgtgacggc agactggatg tcggccatca gggtctgcaa
     3961 atcagttgcc gcgttctgct gggtagaggc cttggccgtc gtgctgccag tcacgccgct
     4021 tgccgctggg gagctttgtg cctggatcag catcgcctga atgtccgagg ccaggcgctg
     4081 cagcagattg gctggtgaca tggtcgcgcc gttcgtcccg gctgcgttct ggttagacga
     4141 cggtgcactg gaggccgagg tactgaaggt cgcctgctcc aggctgatct cgacaaactg
     4201 tccggtcggg gccgaagttc ctggggcgtt ggaaccggat tgggaaacga tggatgcggc
     4261 ccaggggttg gccaagcggt tggccaaggg gttggccaag gggttggact gaagactgcc
     4321 tatggacatg ggttcagact cctgttggtg gtgatggact gtccggctgg agttttgccc
     4381 atctcatgcg tcgcctacgg gccgcgtggc cgattcgtta cgcagcggaa tggaaatcgg
     4441 gtcgtggtcg gtgtcagcca aatcgtagca acccacgtgc cagctcccca gccgcacaaa
     4501 cccgctgatg gcacgttcac ctggccggca gaacctgccg accggaggta tcgcatcggc
     4561 aaggagtgcc ggtctgcacg ccgcgttacc caagcattac g
//
LOCUS       DATAVD010001924         1765 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_929685, whole genome shotgun sequence.
ACCESSION   DATAVD010001924 DATAVD010000000
VERSION     DATAVD010001924.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_929685"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VHX39_36675"
     CDS             complement(<1..222)
                     /locus_tag="VHX39_36675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996738.1"
                     /translation="MPDVELKWASTVFLATLAGCSLAPKYVPPSLTTPVAYTNMGPWT
                     PASPADTQPRGDWWLIYGDQTLDQLEKEVD"
     gene            complement(209..1372)
                     /locus_tag="VHX39_36680"
     CDS             complement(209..1372)
                     /locus_tag="VHX39_36680"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEX3996739.1"
                     /translation="MRYTPPKWLKLLGVVMLMLAICVIAFGVTDRLRASRRLAAAAAQ
                     SVPTVNIVQPAMGGRRVLVLPGELRAFYEAPIYAQVSGYLQHWYADIGTQVKAGQLLA
                     DVSTPDLDQQLLQAQADLQVAVANERLAAVTAKRWNALLAQDAVSQQDADNRNADLQA
                     RIAEVAAARANVQRLQAMETFKRIVAPFDGVVTSRSTDIGALISVGAPTERPLFTVDD
                     ERRLRIYVNVPQPYTADVKPGMQATFTVPQYPQKTFRAVLTSTADAIATSSGTLLVQF
                     QIDNKGGLLRPGDYAQVHIGLRQNDEAMTVPASALMFRDAGMEVAILGPRNHVVIRHV
                     SLGRDFGTTVEIADGLDRSDWVIDNPPDTLEAGDAVQAVKLKSASAPSGNARR"
     gene            complement(1383..>1765)
                     /locus_tag="VHX39_36685"
     CDS             complement(1383..>1765)
                     /locus_tag="VHX39_36685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019092163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEX3996740.1"
                     /translation="VPALTGAIMCMGVATANSILVVSFARERLAAGRSAAVAAVEAGV
                     TRFRPVLMTALAMIIGMSPMALGLGEGGEQNAPLGRAVIGGLIFATCATLTFVPVVFS
                     IVHGRSGARHADTSKEGTTGGSHA"
BASE COUNT          363 a          575 c          514 g          313 t
ORIGIN      
        1 atcaacctcc ttctcgagct gatccaaagt ctgatcacca taaatgagcc accaatcgcc
       61 ccgtggctgg gtgtcggccg gactggcggg cgtccatggc cccatattcg tataggcgac
      121 aggtgtcgtc agcgacggcg gcacatattt cggggccagt gagcaacccg cgagcgtcgc
      181 caaaaaaacc gtcgatgccc atttaagttc aacgtctggc attgccgctc ggtgcgctcg
      241 cagatttcag tttcacagcc tgaacggcat cccccgcttc aagcgtatcc gggggattat
      301 caatgaccca gtcgctgcgg tcgaggccgt ccgcgatctc gacagtggta ccgaaatccc
      361 gcccgaggga aacgtgacgt atcacgacat ggtttcgagg ccccaatatc gcgacctcca
      421 tgccggcatc acggaacatc aaggcgctgg ccggcaccgt catcgcttca tcgttttgcc
      481 gaaggccgat gtgaacctgg gcgtagtcgc ccggccgcag caggccgccc ttgttatcga
      541 tctgaaactg aaccagtagc gtaccgctgc tggtcgcaat ggcatcggcc gtcgacgtca
      601 agaccgcgcg aaaggttttc tgcggatatt gaggaaccgt aaaagtcgcc tgcatgccag
      661 gtttcacatc cgccgtgtag ggctgcggca cattcacata aatgcgcaac cggcgttcat
      721 cgtcgaccgt aaacaaaggc ctttccgtcg gggccccgac ggaaatgaga gcgccaatgt
      781 cggtcgagcg gctggtgacg acgccgtcga agggtgcgac gattcgttta aacgtctcca
      841 tcgcttgcag gcgctgaaca ttggcccgcg ccgccgcaac ctcagcgatt ctggcctgca
      901 aatcagcgtt acggttatcc gcatcttgct gcgagacagc gtcctgtgcc aacagggcgt
      961 tccagcgctt cgcggtcaca gccgccaggc gctcgttggc caccgccact tgcaaatcag
     1021 cctgcgcctg cagcaattgc tgatcgagat ccggcgtgct gacgtcggca agaagttgcc
     1081 ctgctttgac ctgcgtgccg atatcggcat accagtgctg cagataaccg ctgacctggg
     1141 catagatcgg cgcttcgtaa aaggcccgta gttcaccagg cagcaccagg acacgtcggc
     1201 cgcccatcgc cggttgaacg atattcacgg tggggacgga ttgcgccgcc gccgcggcga
     1261 gccgccggct ggcgcgcaac cggtccgtca cgccaaaagc gatcacgcag atcgctaaca
     1321 tcaacataac aacgccgagc agcttaagcc atttcggcgg cgtataacgc aaagcgtctg
     1381 gctcaggcat gagaacctcc ggtggtccct tccttggatg tgtcggcgtg gcgagcgccc
     1441 gatcgaccgt gcacgatgct gaatacgacg gggacaaacg tcagcgttgc gcacgtcgcg
     1501 aaaatcaggc caccgatcac ggcgcgcccg agcggcgcgt tctgttcgcc gccctcacct
     1561 aaccccaacg ccatcggcga catgccgata atcatcgcca gggcggtcat gaggaccgga
     1621 cggaaccgcg tcacgccggc ctcgacggcg gcaaccgcag cacttcggcc cgccgccaga
     1681 cgctcccggg cgaagctaac caccaggatc gaattggccg tggccacgcc catacacatg
     1741 atcgcaccgg tcagagccgg cacgg
//
LOCUS       DATAVD010001925         1816 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_929724, whole genome shotgun sequence.
ACCESSION   DATAVD010001925 DATAVD010000000
VERSION     DATAVD010001925.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_929724"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..677)
                     /locus_tag="VHX39_36690"
     CDS             complement(<1..677)
                     /locus_tag="VHX39_36690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3996741.1"
                     /translation="MRRRDLLKAIPLLATPALAQGTASTLRFVPAANLSTLDPVWTTA
                     TVAIIHAYAVYDTLYGIDDAGRIQPQMCAGHDISADDLSWTFTLRDGLMFHDKAKVLA
                     QDCVTSIQRWAARDPFGQQLMLQTNEIAALDDRRWQIRLKRPFRQMLYALGTRNCFVM
                     PERMARTPASEQIKETVGSGPYRFLPDQWVSGASAAYARFDGYVPRQEAPGYFAGGKV
                     AHFKRVE"
     gene            complement(693..1745)
                     /locus_tag="VHX39_36695"
     CDS             complement(693..1745)
                     /locus_tag="VHX39_36695"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3996742.1"
                     /translation="MEFGMFHEFQRRPGQTEAEAFTESFEQVDEAERAGLDVMWLAEL
                     HCAPERSVLAAPLNIATAIASRTKRMKIGTAVQVLPLCHPLRIAEEATTVDHISHGRL
                     IMGVGRSGFPRTYMAYGISYAESRERFAEVMEILRRAWTQESFSFHGKYYDFDNVSCV
                     PKPFAQPYPELRVAVNSPDTFQEQGERGNPIFVATRLGDLNELVPNLQVYRAAWAAAG
                     HPGNGKVYLRVPVYIAETEKQAREEPMESVMFFYKYLGERIEASAVMDGARAIENRAE
                     RGARLQHIEYEEVMRSKIIAGTPSMVVDRLGQIKEELGLSGILAELNCGMRIPHHQVV
                     NSLNLLCQEVRPKFLD"
BASE COUNT          327 a          543 c          578 g          368 t
ORIGIN      
        1 cattcgaccc gtttaaaatg cgcgactttt cctccggcga aatatccggg tgcttcctgc
       61 cgagggacat agccgtcaaa ccgggcgtag gccgcgcttg cccctgacac ccactgatcc
      121 ggcagaaacc ggtatggacc ggagccgaca gtttccttga tttgctccga ggccggcgtg
      181 cgggccatcc gttccggcat cacgaagcaa ttgcgtgtgc caagtgcgta aagcatttgc
      241 cggaacgggc gcttcaggcg aatttgccag cgccgatcgt ccagagcggc gatctcgttg
      301 gtctgaagca tcaattgctg accgaacggg tcgcgtgcgg cccaccgttg gatcgaagtg
      361 acgcagtcct gcgcgagcac tttcgcctta tcgtgaaaca tcaggccgtc gcgcagggtg
      421 aaggtccagc tcaggtcgtc agccgaaata tcatgaccgg cgcacatttg cggctggatc
      481 cggccggcgt cgtcgatgcc gtacagagta tcgtagacgg cataggcgtg gatgattgcc
      541 accgtcgcgg tggtccacac cggatcgagt gtcgacaggt tcgccgccgg gacgaaccgc
      601 aacgtcgaag cagtcccttg cgccagcgcc ggcgtcgcga gcagtgggat ggctttcagc
      661 agatcccggc gacgcatggc gctgcctctg ggtcagtcga ggaacttcgg tcgcacttcc
      721 tggcacagca ggttcagcga attgaccacc tgatggtgcg ggatgcgcat gccgcagttc
      781 aattccgcca gaatgccgct caggccaagc tcttccttga tctggcccag gcgatcgacc
      841 accatcgacg gcgtgccggc gataattttg ctgcgcatga cttcttcgta ttcgatgtgt
      901 tgcagccgcg cgccgcgttc ggcccggttc tcgatggcgc gggcgccgtc catgaccgcc
      961 gaggcctcga tccgttcgcc gagatatttg taaaagaaca tgacgctttc catcggctct
     1021 tcgcgcgcct gcttttcggt ttcggcgata tagaccggca cgcgcagata gaccttgcca
     1081 ttgcctggat gcccggcagc cgcccaggcg gcgcggtaga cctggaggtt tgggacgagc
     1141 tcgttgaggt cgcccagccg ggtggcgacg aaaatcgggt tgccgcgttc gccttgctcc
     1201 tggaacgtat cggggctgtt caccgccacg cgcagttccg gatagggttg cgcgaacggc
     1261 ttgggcacgc aggacacgtt gtcgaagtcg taatacttgc catggaacga gaagctttcc
     1321 tgagtccagg cgcgcctgag aatttccatg acttcggcga accgttcccg gctctcggcg
     1381 taggaaatgc cgtaggccat ataggtccgg ggaaagccgc tgcggccgac gcccatgatc
     1441 agccggccgt gactgatgtg atcgaccgta gtggcttcct cggcgatacg cagtggatga
     1501 cacaacggca gcacctgcac ggcagtgccg attttcatac gcttggtgcg gctggcgatg
     1561 gcagtggcga tgttcaacgg cgcggccagc acggaacgct cgggggcgca gtgcaattcc
     1621 gcgagccaca tgacgtcgag gccggcacgt tcggcctcat cgacctgctc gaacgattct
     1681 gtgaaagctt cggcttcggt ctggccgggc cggcgctgaa attcgtggaa cataccgaat
     1741 tccatggtca cttctccttg ttatggcgga aaagtgacag gtttggcgac ggttgcaagt
     1801 ccccctgggg tgggct
//
LOCUS       DATAVD010001926        10243 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2044138, whole genome shotgun sequence.
ACCESSION   DATAVD010001926 DATAVD010000000
VERSION     DATAVD010001926.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 10243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10243
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2044138"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(240..620)
                     /locus_tag="VHX39_36700"
     CDS             complement(240..620)
                     /locus_tag="VHX39_36700"
                     /inference="COORDINATES: protein motif:HMM:NF018404.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ClpX C4-type zinc finger protein"
                     /protein_id="HEX3996743.1"
                     /translation="MPEADQTQTRKRLYLCSFCGKAQPDVKTLISGPGVFICDECVQL
                     CQAVITKEARTPTAREAPNPLLPDDVPTENLLRTLAGYNGAFERIDAAMQDVVDILRE
                     RDVSWATIGQTLAVSRQAAWKRFA"
     gene            1219..1695
                     /locus_tag="VHX39_36705"
     CDS             1219..1695
                     /locus_tag="VHX39_36705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996744.1"
                     /translation="MLGQKRLSQTKADDWAAEISLPARIPDRMPKTEVLELAKSAFAI
                     GYQRAEFAHRESRAEYFRSRIQVGHGDRQITAFVFDAPYPFIEIYSEPGSGSLTASEA
                     LTLSRWLNERALEMQPQQPVHWLRRLMRRKPTLPGHESHAPALRKLLTRARTPHDQ"
     gene            complement(2060..3514)
                     /locus_tag="VHX39_36710"
     CDS             complement(2060..3514)
                     /locus_tag="VHX39_36710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008946167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEX3996745.1"
                     /translation="MTHDLIRLTATEAVARLRKREISPLELIDAAEARIAEVEPKVNA
                     LPTLCFDRAREHARRLMAERNPPAASEPGWLGGLPVSIKDLNDVAGVRTTYGSPIFRD
                     HVPHRSHPLVERIERKGGIVVAKSNTPEFGAGGSTFNEVFGRTRNPWNLALTCGGSTG
                     GGAVSVATGEVWLAQGTDHGGSLRRPATYCSVVGIRPSPGRVTRGTANNLWSPLSVQG
                     PMARNIPDLALFLDTMAGYCPRDPMTFDAPAVPFVAALDCAGPPKRIAYSPDYGGKIL
                     VERETRAICEAAVRRFEDLGCIVEEFAPDLGGVDEAFMILRAQHFVVDREIQLREHRD
                     LVKSDIIWNTEKGLSQSPSQLAWADRERAAFYRRVSEMFERYDVFITPSAGTPAFDVN
                     RTHPATIDGVALANYMGGSMLNAAMTMSSCAAVAVPAGFDQYGRPVGLQIAAPPRQEA
                     RALASAAFLERMTGLDRQLPIDPRPGTVPMQSGE"
     gene            3578..5110
                     /locus_tag="VHX39_36715"
     CDS             3578..5110
                     /locus_tag="VHX39_36715"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HEX3996746.1"
                     /translation="MIFHWRLFPLLLLGGCTTVGPNFSAPNWSGPGTWFGGGKERAPV
                     SQTVEAPIDPNWWTLFKDPTLTTLEQRVANENLDVRVAALRIDESRAQYDIAAAAGLP
                     NLNANTSYTRQKASNVGVFANAPNPLGASGISGSTAGGLKSHTLNAFDAYQVGFTSSW
                     ELDLWGQIRRSVESAGATVQASEDTRRGVLLASLAEVARDYITLRGVQTDLRIAHENV
                     QIAQDSLKLTQQRAAGGVTTNLDVAQAQGQLSVNKALVPTLEQQEAQLINAVSLLLGM
                     PPNALRAELETPKAVPPVPPLVPVGLPSELARRRPDVRMAEAQLHAATASIGVAEAAF
                     YPSVSLSGSFGLQAIQFAPLFGFNARQFALGPTVSVPIFEGGQLKATLHLSEARQKEA
                     VITYQQTVLTALHEVDNALTAYRSEQARRQELIDAVASIRQALDLARARYAQGVADFL
                     TVLVVQRALEDSELLLADSTTRVSDNLVTLYKALGGGWETDLPDAPKPDGSKQAAVSP
                     KM"
     gene            5193..6491
                     /locus_tag="VHX39_36720"
     CDS             5193..6491
                     /locus_tag="VHX39_36720"
                     /inference="COORDINATES: protein motif:HMM:NF021589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEX3996747.1"
                     /translation="MRIRREWLLALCLLCCSPLCHILVAQAQLLDALFPEGVPGYGTE
                     QGVTVESRRRPEYEPLGIRIDTTTIRPMFGLSAGYDNNIFGGPSHRGAWQISAQPSVL
                     ASMENSLGSTGLYLSANDVHYLGESTQNRTDASAFLGGTFYVGKDKLTLGAGYLAQHE
                     DRTALDALPSDRPVAFAVANFRASYDAVFGSLTATPALEVNHYQFDSTTIFGHPVGEA
                     ARDRTSIQNGLTLRYGWMSGRDLLWVNRVVETRYTQPVTGQPSNNSNAWQSLFGVDYD
                     DDTVWRYRLLGGVEYRQAAAGTTASQTAGIAEAEVTWSPTGMTTLRASAFRGIEDAAQ
                     TGLSSYTYSTAQLRADHELWRNVVLTASATVRQATFDQTGGQQVGLGFDAGASWLINR
                     NLRLSLTYDFSDVRNAHLATGTVAGDYTRNLTLLALRVAM"
     gene            6500..7264
                     /locus_tag="VHX39_36725"
     CDS             6500..7264
                     /locus_tag="VHX39_36725"
                     /inference="COORDINATES: protein motif:HMM:NF015748.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WecB/TagA/CpsF family glycosyltransferase"
                     /protein_id="HEX3996748.1"
                     /translation="MTLLGMDFADLEAADAAAAIAARPDGAPFGYVVTPNADHLVRMS
                     RDTALAGIYRNAWLRLLDSRVVAAIARGCGMLSPRVATGSDLTALLLARHVHPGEQIT
                     IIGLRSSWLPALMARYGLAPPFHYDPPMGFDSNPAAFRDTVAFILAHPARLVFLAVGS
                     PRQEYLAAAVAASGQATGTGLCIGASLLFLAGAERRAPGWMQRDGLEWAYRLAHDPGR
                     LAGRYLLDSPRIVPLLLRERAVTTVPSAPMPDVREP"
     gene            complement(7221..8393)
                     /locus_tag="VHX39_36730"
     CDS             complement(7221..8393)
                     /locus_tag="VHX39_36730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996749.1"
                     /translation="MSGFMLRRRAAPLVALLSGLTVSSVARAAPFMIVGDDEKPSTDA
                     QGKPVVNPTGNDAVLIVDLAKPEDPKIVASLPLENSIVGPPVNLAISPNGAIALVADS
                     MTVAEDNGVRKMVPTDKLFVIDMKASPPKLVDTLTLGKQPSGLSFSPDGNMALVCNRA
                     DGTITVLKIDGTKVTQTGTVTVSPSVAQVVFTPDGKRALVVRSPDNKVGFLDVDGDKV
                     AYNKLDVPTFPFPYNIVVSPDGKLAITADNGGGSSDGSLDAATVIDLQGPHPHGIAHL
                     TVGDAPEGLAMAPNGKFAVIAEVNGSNNPSAWFYHKTGSVTLLKINGTTVTAGNTVQV
                     GRLPEAIMVSPDSRYIYVGNFLDNDFSILKVNGTDLTDTGKRFKVPGHPASGRMGP"
     gene            complement(8790..9497)
                     /locus_tag="VHX39_36735"
     CDS             complement(8790..9497)
                     /locus_tag="VHX39_36735"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX3996750.1"
                     /translation="MRAMDVMTANVITVTPETSVQDLAKVLSQHGISGAPVVDAANRL
                     VGIVSEGDLLHRTETGTERRIQPRRVRWLDGLMSDQNVARDYLKSHGRQVRDVMTREV
                     ITVGETTDLAEIADLLETKRVRRVPVVRDGAIVGIVSRANLVRALAMAPAEAASSTVL
                     DDFAIRDALLTELRGKPWAKVWTSEVTVRDKVVHVWFADDQPIEEREAVRIAAENTPG
                     VAHVEEHLVHVPMTPVL"
     gene            9702..>10243
                     /locus_tag="VHX39_36740"
     CDS             9702..>10243
                     /locus_tag="VHX39_36740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996751.1"
                     /translation="MEPNHLTLGQDEFNAHMLRGVMDATGQPGETAQYAQMRCATIVE
                     IFRTFEAANPMESMIACHCISLHFLLESALRDANAPNLRLELSMRLRASVMAIRKSLH
                     LCMADFASLHARNKARATEVLQRANQPDTVATPAKPQPAAVQQPVARPEQPRPVAAKP
                     TLPVAPLAGLDALVRSALRLP"
BASE COUNT         1876 a         3185 c         3147 g         2035 t
ORIGIN      
        1 tcgtaatatg gcccgaaagc gtctgcgtac atccctgctt atctcttttc tgatctgcgt
       61 caaattcctt tcctgatcac aacgtctgag tttggccagc ggtaattatt ttaacgccga
      121 taagaaagga gataagcagg aagcacgcag atgccatcag gggtttcgga gcgctccggg
      181 tccggtccaa agccattcgg tcgtgtccat cgattccgga ccgaccctga gaggcacttt
      241 cacgcgaacc gcttccacgc cgcctgccgg gacacggcaa gggtctgccc gatcgttgcc
      301 caactcacgt cgcgctcccg aagaatgtcc acgacgtcct gcatggcagc gtcgatcctc
      361 tcgaatgcgc cattgtatcc ggcgagggtc ctgagcaggt tttcggttgg tacatcgtcc
      421 ggcagcagtg ggttcggcgc ttctcgcgcg gttggtgtcc tggcctcctt ggtgatgact
      481 gcctgacaca gctgcacaca ttcgtcgcag atgaacacgc caggtcccga gatcagggtt
      541 ttcacatctg gttgcgcctt tccgcaaaag gagcagagat aaagtcgctt gcgggtctgg
      601 gtctggtcgg cttccggcat ggtggcgtcc ttgtcaacga ctggatgaca gtcaaccatg
      661 cgttggcaaa cgtcgtcaac cctactttga cagtctcatc ggtttcggaa gctgcgcaaa
      721 cagccggtga gctttgaaca tatgagacag cacattgtcg ggccgcgacg aagcgtcggc
      781 aggagtacgc tcaggccagc cattgcgccg cgaaagtaac atagtcccgt gtgccacctg
      841 cgttatgatt ctgcgaggca acctggatgg atgcgccaac tccggtgccc gtccccggga
      901 tagcgacaga cactggcatg tggagacgtt ccgtgcgcgg gcggatcacg gccgaatggc
      961 tcaaaatcag aaatttcttg caaaatatat gtgacacaag ctacactaac gtttcggacc
     1021 atattaggca ctccgcaagc gcttacgaca tttgaacggc ggtcgatcgt ggatatgcaa
     1081 ttattcttgt ttctcgcctc taccattcca gcggcggttc tggcagggtt cgccacttcg
     1141 tatggcgaca ggccggagcg gacgcgctgg cagtttttcg tgcctgcaag cagggaacaa
     1201 attgcggggg gccggtaaat gcttgggcaa aaacgcctgt cccagactaa agcggatgac
     1261 tgggcagcag aaatcagcct tccggccaga atccccgacc gcatgcccaa gactgaagta
     1321 ctggagctcg ccaagagtgc gttcgccatc ggctatcagc gggccgaatt tgcacatcgg
     1381 gagagccggg ccgaatattt ccgcagtcgc attcaggtcg gtcatggcga ccgccagatc
     1441 acggccttcg ttttcgatgc gccctatcca tttattgaga tttactcgga accgggaagt
     1501 gggtctctaa ccgcgtcgga agccctcact ctcagccgct ggctgaatga gcgagcgctg
     1561 gagatgcaac cgcagcaacc ggtccactgg ctacgtcggc tgatgcgacg caagccaacg
     1621 ctgcctgggc acgaatctca tgccccggcg ctgcgcaaac ttctgacccg cgcgcgtacg
     1681 cctcacgatc aataaccatc ccacggggcg cgagtcgcat ggcgggcttc gagtctgcct
     1741 gcgtctttga cctgggctat tcgagcccgg tggcatttac ctcgatattg aggcaatggg
     1801 ttggctcggc accgcttcgg tatcgcgagg ccgcaagctg acattgcgcc ccggtgcgaa
     1861 ctaaagctcg gccggcgtta cggaaactgt tctttccgca ggttgaaggc gatcgaaatt
     1921 cgcggccggt cgccctgatc tacctggcaa atgcagctat aatcctgtcg gtttcggcca
     1981 ttatcctggc ccctggcgtg ccgggaactc ggagtgttgc caaacgcctt gggtggacca
     2041 atcccgtctt gtcggttgct cattcgccgc tttgcatggg cactgtgccg ggccttggat
     2101 cgatcggcag ttgtcgatcg agaccggtca ttcgctccag aaacgcggcg gacgccaaag
     2161 cgcgggcttc ctgtctgggg ggtgcggcga tttgcaaccc aacgggccgt ccgtattggt
     2221 cgaacccggc gggcaccgcg accgcggcgc aactggacat tgtcatcgcc gcgttcagca
     2281 tcgagccgcc catgtagttt gccagcgcca ccccgtcgat cgttgccgga tgcgtgcggt
     2341 ttacgtcaaa cgccggggtt cccgcactgg gtgttatgaa aacatcgtac cgttcgaaca
     2401 tttcgctaac gcgacggtaa aatgccgcgc gctcgcgatc agcccaggcg agttgggagg
     2461 gcgattggga gaggcctttt tcggtattcc aaataatgtc cgatttgacg aggtcgcgat
     2521 gctcgcgcaa ctgtatctcg cggtccacga cgaaatgttg ggcgcgcagg atcatgaatg
     2581 cttcgtcaac gccgccaagg tcgggtgcga attcttcaac gatgcaaccc aggtcttcga
     2641 agcggcgcac ggcagcttcg cagatcgcac gggtttcgcg ctcgaccagg atcttgcccc
     2701 catagtcggg actgtaggca atccgcttcg gcggtccggc gcagtcaaga gctgcaacga
     2761 acggaacagc cggtgcgtcg aacgtcatcg gatcgcgtgg gcaatatccc gccatggtgt
     2821 ccagaaacaa tgccagatcc ggaatgttcc gcgccattgg cccttgcacc gacaatggcg
     2881 accaaagatt gtttgctgtc ccgcgcgtca cccgtccggg cgagggccgt atccctacca
     2941 cggaacaata ggttgccgga cgccgcaacg atccgccatg gtcggtgcct tgcgccagcc
     3001 agacctcgcc ggtggcgacc gagactgcgc ctccaccggt cgatccgccg caggtcagcg
     3061 ccaggttcca cggattgcgc gtgcggccaa atacttcgtt gaacgtcgag ccaccggcac
     3121 cgaactccgg cgtgttcgac ttcgccacca cgatgccgcc tttccgttcg atccgctcca
     3181 ccaacggatg cgagcgatgc ggcacatggt cccggaagat cggcgagcca tatgtcgtgc
     3241 gtacgccggc cacgtcgttc aggtctttga tcgagaccgg caatccgcca agccagccgg
     3301 gttcgctcgc ggctggcggg ttgcgttccg ccatcagccg cctcgcatgc tctcgcgcac
     3361 gatcgaaaca aagcgtcggc agcgcgttga cctttggttc cacctcggcg atccgcgcct
     3421 ccgcggcatc gatcagttcc aatggggaaa tttctcgttt gcgcaacctg gcgacggctt
     3481 cggtcgcggt caggcggatc aggtcgtggg tcaacggcac ctcctgtcgg atgcgtcaac
     3541 gcttgcgcga agccgccctg tcgtgcaagg cgggcgcatg attttccatt ggcgtctttt
     3601 ccccctgctg ctcctgggtg gctgcaccac cgttggaccg aatttcagcg cgcccaattg
     3661 gagcggcccg ggcacatggt tcggtggtgg caaggaacgt gcgccggtca gccaaacggt
     3721 cgaggcgccg atcgatccga actggtggac cttgttcaag gacccgacgt tgaccacgct
     3781 cgaacagcgc gtcgccaacg aaaacctcga cgtccgggtc gctgctttgc ggatcgacga
     3841 gtcccgtgcg caatacgata tcgccgcggc ggccggattg ccgaacctca acgccaacac
     3901 gtcgtacaca aggcaaaagg cctctaacgt tggcgtgttc gccaatgcgc ccaatccgct
     3961 cggcgcctcg gggatttccg gcagcacggc gggcgggctg aagtcgcaca cgctaaacgc
     4021 gttcgatgcg tatcaggtcg gcttcacctc gtcctgggaa ctcgatcttt gggggcaaat
     4081 ccgccgctcg gtcgagtcgg ccggtgccac ggtccaggcc tccgaggaca ccaggcgcgg
     4141 cgtgctgctg gccagccttg ccgaggtggc gcgcgattac atcacattgc gtggcgtgca
     4201 aaccgacctg cgcattgcgc acgagaatgt gcaaatcgca caagatagtc tcaaactgac
     4261 gcagcagcgc gctgccggcg gcgtaacgac caacctcgat gtcgcccagg cacagggtca
     4321 attgagtgtg aacaaggcgc tggttcccac gttggagcag caggaggcgc aactgatcaa
     4381 tgcggtcagc ttgctgcttg ggatgccgcc gaacgcgctg cgtgccgaat tggagacccc
     4441 gaaagccgtg ccccccgtgc ctccgctcgt cccggtcggc ctgccatcgg aactagcgcg
     4501 tcgcaggccg gacgtgcgca tggccgaggc tcagctgcac gcggcgaccg ccagtatcgg
     4561 cgtggcggag gcagcgttct atccctcggt atcgctgagc gggagtttcg gtctgcaagc
     4621 catccagttc gcgccgttgt tcgggtttaa cgctcgccag tttgcgctcg gaccaaccgt
     4681 ctcggtgccg attttcgaag gtggtcagtt gaaagccacc ctgcatttgt ccgaggcacg
     4741 gcagaaagag gcagtcatca cctatcagca gaccgttctt acggcattgc atgaggtcga
     4801 taacgcgttg accgcatacc ggtcggagca ggctcgccga caggaactga tcgacgcggt
     4861 tgcctcgatc cgccaggcat tggacctcgc gcgggcgcgt tacgcccagg gggtagcgga
     4921 ttttctgacg gtgctggtcg tgcaacgggc tctcgaggac agtgagttgt tgctggcgga
     4981 cagcacgacc agggtgtcgg acaatctggt gacattatac aaagccctcg gcggcggctg
     5041 ggaaacggat ttgcctgacg cgccgaagcc ggacggttca aagcaggcgg cggtcagccc
     5101 gaaaatgtaa agcaggaccc agccgtcgct taactgattc ttagcgcggg catttacccg
     5161 ccgttcattc gctgccgtca gcatccgcga agatgcgtat ccggcgcgaa tggcttctgg
     5221 cactttgcct tctgtgttgc tccccgcttt gccacatcct ggtggcacag gcgcaactgc
     5281 tagatgcgct gtttcccgaa ggcgtgccag gttacgggac cgagcagggc gtcaccgtcg
     5341 agtcccgccg acgccctgag tacgagccgt tgggcatacg catcgatact acgacgatcc
     5401 gtcccatgtt tggactgtct gctggctacg acaacaacat cttcggtggg ccctcccatc
     5461 gcggcgcatg gcagatctcg gcgcagccgt cggttctggc cagcatggag aactcgctcg
     5521 gcagtaccgg cctttacctc tccgccaacg atgttcatta cctgggcgaa tcaacgcaga
     5581 accgcaccga cgcctcggcg tttctgggtg ggacgttcta tgtggggaaa gacaagctca
     5641 ctctgggcgc tggctacctg gctcaacacg aggaccggac cgcactcgac gcattgccat
     5701 cggatcggcc ggtggcgttc gccgtggcaa atttccgcgc gtcgtatgat gctgtgttcg
     5761 gctccctcac cgccacgccc gcgctcgagg tcaaccatta ccaattcgat agcacaacca
     5821 tcttcggcca cccggtcggc gaggcggcac gtgaccgaac cagcatccaa aacgggctaa
     5881 cgctgcgcta cggctggatg tccggacggg atttgctgtg ggtgaaccgg gtcgtcgaga
     5941 cgcgttatac ccaaccggtc accggccaac cctcgaacaa ttcaaatgcg tggcaatcct
     6001 tgttcggggt cgattacgac gacgacacgg tctggcggta tcggctgctt ggcggtgtgg
     6061 aatatcgcca ggcggcggcc ggcacgacgg cgtctcagac cgcaggtatc gccgaggccg
     6121 aggtcacctg gtcaccgacc ggaatgacca cactccgcgc ctcggcgttc cgtggcatcg
     6181 aagatgcggc gcagaccggt ctgtccagct atacttatag cacggcccag ttgcgggcgg
     6241 atcacgagtt atggcggaac gttgtgctga ccgcctcggc caccgtgcgg caggcgacgt
     6301 tcgatcagac cggcgggcaa caggttggcc tcgggttcga cgccggcgcg agttggctga
     6361 tcaaccgaaa tttgcggctg tccctgactt acgattttag cgacgtaagg aatgcgcatc
     6421 tggccaccgg gactgtggcc ggcgattaca cgcgcaatct gacgctgctg gcattgagag
     6481 tcgcgatgtg attcggaccg tgacgctgct gggtatggac tttgccgatc tggaggcggc
     6541 ggacgctgcc gcagcgattg cagcacggcc ggacggagcg ccatttggct atgtcgtgac
     6601 gccgaatgcc gaccacctgg tgcgaatgtc gcgcgatacg gcactggccg ggatctatcg
     6661 aaatgcctgg ctgcggctgc tggactcgcg tgtggttgcg gcgatcgcgc gaggctgcgg
     6721 catgctgtct ccgcgggttg ccaccggcag cgatctgact gcgctgttac ttgctcgaca
     6781 tgttcaccca ggtgagcaaa tcaccattat cgggctgcgg tcatcatggt tgccggcgtt
     6841 gatggcgcgc tacggactgg cgccgccgtt tcattacgat ccgcccatgg ggtttgatag
     6901 caatccggcc gcgttccggg acaccgttgc tttcatcctc gcccacccgg ctcggttggt
     6961 atttctggcg gtcggctcgc cgcggcagga atacctggcg gcggcggtgg cggccagcgg
     7021 tcaggccacc ggaaccggat tgtgcatcgg cgcgagcctg ttgtttctgg ccggcgccga
     7081 gcgtcgcgca cccgggtgga tgcaacggga cgggctggaa tgggcgtacc ggctggccca
     7141 cgatccgggc cggctcgcgg gccgttactt gctggacagc ccgcgaattg tgccgctatt
     7201 gttgcgggag agggcggtta ctacggtccc atccgccccg atgccggatg tccgggaacc
     7261 ttaaaccgct tgccggtatc ggtgaggtcg gtgccgttca cctttaaaat cgagaaatcg
     7321 ttgtcgagga agtttccgac gtaaatataa cgggaatccg gtgaaaccat gatcgcctcc
     7381 ggcagcctgc cgacctgtac cgtattgccc gcggtcaccg tcgtgccatt gatcttcagc
     7441 aaggtcacgc tgccggtctt gtgatagaac cacgctgacg gattgttcga tccattcacc
     7501 tcggcaatca cggcgaattt gccgttcggg gccattgcca ggccctctgg cgcgtcgcca
     7561 accgtcagat gcgcgatacc atgcggatgc ggcccttgca ggtcgatcac cgtcgctgcg
     7621 tccagactgc catccgagga accgccgccg ttatccgcag taatcgccag cttgccgtcc
     7681 ggcgagacaa cgatgttgta cgggaacgga aatgtcggca cgtcgagctt gttgtaagcg
     7741 accttgtcgc cgtccacgtc cagaaagcca actttgttgt ccggcgaccg caccaccagg
     7801 gcacgcttgc catccggcgt aaacaccacc tgcgccacgc tcgggctgac cgtgacggtc
     7861 ccggtttgtg tcactttcgt gccgtcgatc ttcaacacgg tgatcgtacc gtcggcgcgg
     7921 ttgcacacca gcgccatatt gccgtctggg ctaaacgaca ggccggacgg ctgcttgccc
     7981 aaagtcaggg tgtccaccaa cttcggtggg ctcgctttca tgtcgatgac gaacagttta
     8041 tccgtcggta ccattttgcg gacgccatta tcctccgcca cggtcattga gtctgccacc
     8101 agagcaattg ccccattcgg cgagatggca agattgaccg gcggcccgac gatcgagttc
     8161 tccagcggca gggaggcaac gatcttcggg tcctcgggct ttgccagatc cacgatcagc
     8221 acggcatcgt tcccggtcgg attgaccacc ggcttgccct gggcgtcggt agacggcttt
     8281 tcgtcgtcgc cgacaatcat gaagggagcg gcacgtgcca cggatgacac cgtgaggccg
     8341 gacaacagtg caacaagggg cgccgcgcgg cgccgcaaca tgaagccaga cattgtttct
     8401 ctcccaggat ttattttgtt cctggccgag tatgtgccgt ggaagcctta ctcgcaagtc
     8461 gcgtcaggtg atcctgccgt ttagtgccag gcgccggcaa ggttggctat tcctcgattg
     8521 cccaatcgtc attcccggac ttgttccggg gacaatcgcg gcacggtgct gatgttgatc
     8581 cgcgtgacaa gcacgcggat gacgaaagag gggttcccga ctcacggacc actcattgtg
     8641 ggtacgaaga cccactgagg cactttgctc gatctggtcc ctcgaacaac tcccggcccc
     8701 gcgcaggcga gaccgggcga tgacgggata aggttggcac gaagcagtac cgtcgtcgca
     8761 gccggcacac gcccgctaca agacgcccgc tacagaaccg gcgtcatcgg cacgtgcacg
     8821 agatgctctt ccacgtgggc aacacctggc gtgttctcgg cagcgatccg aaccgcctcg
     8881 cgctcctcga tcggctggtc atcggcaaac cagacgtgca cgaccttatc ccgaaccgtt
     8941 acctcagaag tccagacttt cgcccagggc ttgccgcgga gttcggtcag gagcgcatcg
     9001 cggatggcaa aatcatccag gacggtgctg ctcgcagcct cggccggcgc catcgccaga
     9061 gcgcgcacca ggttggcccg gctgacgatc ccaacgattg cgccgtcgcg caccacgggc
     9121 acccgccgga ctcgtttggt ctccagcaga tcggcgatct cggccaggtc cgtggtctcc
     9181 ccgacggtga tcacttcgcg cgtcatgaca tcacgcacct gacggccatg cgacttcaga
     9241 taatcgcgcg cgacgttctg gtccgacatc agaccgtcga gccaccgcac gcggcgtggc
     9301 tggatccgtc gctcggttcc ggtttcggtt cggtgcaaca ggtcgccctc gctgacgatg
     9361 ccaacgaggc ggttggccgc atccaccacg ggtgctccgc tgatgccgtg ttggctcagg
     9421 accttcgcga gatcctgaac ggaagtttcg ggagtgacgg tgatcacgtt ggccgtcatc
     9481 acgtccatcg cacgcattgg ttgtcctccg attggggtat ggctgattgc cgacgctatc
     9541 tgatcggctg tgcgctgcgc cgcattgacg caggtcaacc ggcccggtcg ggcttgcgcc
     9601 ggcgggggtg gcaccgttcg cggcgcatcg aatgcgcttg acgcacccgg ttgtgttatt
     9661 tattctaact atcgctgcaa cccataaccg gaccgcgaac catggaaccc aaccacctga
     9721 cactcggcca ggatgaattc aatgcccaca tgctgcgagg cgtcatggac gccaccggcc
     9781 aacctggtga gacagcccag tacgcgcaaa tgcggtgtgc cacgatcgtc gagatcttcc
     9841 gcacctttga ggccgccaat ccaatggaga gcatgatcgc ctgccactgc atctcgctgc
     9901 actttctgct ggaatcggcg ctgcgggatg ccaatgcacc caatctgcgg ctggaactgt
     9961 cgatgcggtt gcgcgcttcg gtgatggcaa tccgcaaaag cctgcatctt tgtatggcgg
    10021 attttgcgag cctgcatgcg cgcaacaagg cgcgggcgac ggaggtgctt cagcgtgcca
    10081 accaaccgga cactgtggcg acgccggcaa agccgcagcc ggcagcggtg cagcaacctg
    10141 tggccaggcc ggagcagccg cggccggtcg ccgccaaacc gacgttgccg gttgcgccac
    10201 tggcgggcct cgatgctttg gtccgatcgg cgttgcggtt gcc
//
LOCUS       DATAVD010001927         3579 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_366579, whole genome shotgun sequence.
ACCESSION   DATAVD010001927 DATAVD010000000
VERSION     DATAVD010001927.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3579
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366579"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..707)
                     /locus_tag="VHX39_36745"
     CDS             complement(<1..707)
                     /locus_tag="VHX39_36745"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX3996752.1"
                     /translation="MTEAKRRLLFVSPRFLFPMDQGGKIRTGNILREMHDGAFEVTLA
                     SPAPPDVNRFQSDLDAACDEFISWPQRLPGPIERGLSLARALPVAVASDQSKAGSACI
                     RRALNEKPDVVVVDFPHAGVLMPDRIDAASVLFTHNVEGEIFERHAARAKGLWRLIWT
                     DQSRKMARFEGDTLRRFDTVIAVSQRDADVLAKRYELAQVAAIDTGVDLEFFTSAAPD
                     QATDPGPEGGTLVFTAT"
     gene            complement(730..2046)
                     /locus_tag="VHX39_36750"
     CDS             complement(730..2046)
                     /locus_tag="VHX39_36750"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HEX3996753.1"
                     /translation="MRISVFGIGYVGVVSCGCLAELGHEVIGVDVTAEKIAMLSAGRS
                     PIVEEMIDALIADAVHRGRLTATDDVTDAVSRSDVSFISVGTPSAANGSVALGAVDAV
                     VGQIGRALRDKKGPHTVVMRSTVPPGTAEDRVIPLLERESGRVLGDQLHYYSNPEFLR
                     EGSSVRDFRCPPFTLIGAPQGDDADALRELYGPIDAPVHVAPYRVAESVKHISNVYHA
                     VKLAFANEAGAVLASYGVDAREAFRLLCEDKLLNVSSAYLQPGFAFGGSCLPKDVRSF
                     LSLADAQNLAAPFLKQLLPANQAIIDRAYDAITRHGRLSISLFGLAFKQGTDDLRESP
                     FVLLAERLLGRGYDLRIYDRFVQVARLMGANRSYIDKEIPHLERLMVISPEAALSSSR
                     IAVIGHIAPEDRPSLLAGLAGHIVIDLTGMAALRTLPGITYEGLCW"
     gene            complement(2232..3089)
                     /locus_tag="VHX39_36755"
     CDS             complement(2232..3089)
                     /locus_tag="VHX39_36755"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HEX3996754.1"
                     /translation="MLKFGVSMFFTDYSMGPGELGQALESRDFESVWAPEHSHIPLSR
                     KTAFPGGGDLPKKYYDCMDPFVTLTAAAMATKTLMVGTGVCLVQQRDPIQTAKLVASI
                     DNVSGGRFLFGIGNGWNQDEMENHGTEFKSRHKRARENIEAMKAIWTQSKAEYHGEFV
                     NFDPMMTWPKPVRKPHPPVIVGGAFPYSARRAIRYGDGWIPQAARGGYKEIADMFPEF
                     RKMATEAGRDPASIAITVWFPRKDPDLMKRYEDLGVERVVFNLDSAPAEKVLPEIDSI
                     GTLMAKVNT"
     gene            complement(3379..3454)
                     /locus_tag="VHX39_36760"
     tRNA            complement(3379..3454)
                     /locus_tag="VHX39_36760"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3419..3421),aa:Phe,seq:gaa)
BASE COUNT          723 a         1119 c         1072 g          665 t
ORIGIN      
        1 atggtcgcgg taaacaccag ggtgccaccc tctggaccag gatcagtggc ctggtcaggc
       61 gctgcggacg tgaagaactc aagatcgacg ccggtgtcga tcgccgccac ctgagccagt
      121 tcataccgtt tcgccaacac gtcggcgtcg cgttgtgaaa ctgcgatgac ggtatcgaag
      181 cgacgcagcg tgtcgccttc gaaacgggcc atcttgcggc tctgatcggt ccagatcagg
      241 cgccaaagcc ctttggcccg cgccgcgtgg cgttcaaata tctcaccttc aacattgtgc
      301 gtgaacagta ccgaggcggc gtcgatacgg tccggcatca gaacgcccgc atgcggaaaa
      361 tccaccacga cgacatcggg tttctcgttc agcgcgcgtc gaatgcaggc gctgcccgct
      421 tttgattgat cgctggctac tgcgaccggt agcgctcgcg caagcgacag tccgcgctcg
      481 atcgggcccg gtaagcgctg gggccaggaa atgaactcgt cgcatgcggc gtccagatcg
      541 gactgaaatc ggttcacatc cggtggggca ggggaggcca acgtcacctc aaatgccccg
      601 tcgtgcatct cccgcaggat gttgcctgta cgaatcttgc cgccctgatc catcggaaac
      661 aggaagcgcg gactaacgaa cagcaatctg cgctttgcct ccgtcacgcc cgaacgttgc
      721 ccatcacatt caccagcaca ggccttcgta ggtaatgcca ggcagtgtcc gcagcgccgc
      781 cataccggtc agatcgatga cgatatgacc ggcgaggcca gccagcagag acggccggtc
      841 ctcgggggca atatgcccga tcacggcgat ccggctggaa gacaaagcgg cttccgggct
      901 gatcaccatc aaccgctcca ggtgcggtat ttccttgtcg atatagctgc gatttgcacc
      961 cattaaacgg gcgacctgaa cgaaccggtc atagatccgc aaatcgtagc cgcgaccaag
     1021 caatcgctcg gccagcaaaa cgaagggcga ctcgcgcaga tcgtcggtcc cttgcttgaa
     1081 cgccaggccg aacaagctga tcgacagtcg gccgtggcgc gtgattgcgt catacgctcg
     1141 gtcgatgatc gcctggttgg ccggcaagag ttgcttcaga aacggtgcgg ccaggttctg
     1201 cgcatccgcc agcgacagga agcttcgcac atctttcggc aagcacgaac cgccaaaggc
     1261 aaaccccggt tgcaaatacg ccgaggacac attcagcagt ttgtcctcac atagcagtcg
     1321 gaatgcctct cgtgcatcga cgccatacga cgccaggact gccccggctt cattcgcaaa
     1381 cgccagtttg acggcatgat aaacgttgga gatgtgtttg acgctttccg caacccgata
     1441 cggtgcaaca tgcaccggcg catcgatcgg tccgtaaagt tcgcgcagtg catcggcgtc
     1501 gtcaccctgc ggagcgccga tcaaagtgaa cggtggacag cgaaagtcgc gcaccgacga
     1561 gccctcgcgc aggaattccg ggttgctgta gtagtgcagt tggtcaccca acacgcgacc
     1621 cgactcgcgt tccaacagcg ggataacgcg atcctcggcg gtgccgggtg gcacggtgga
     1681 gcgcatcacc accgtgtgcg gccctttctt gtcccggagg gcgcgaccga tctggccgac
     1741 caccgcatcg acggcgccca gagcgacgct gccgtttgcg gccgacggcg tgccgaccga
     1801 gatgaaggaa acatcgcttc ggctcaccgc atccgtgaca tcgtccgttg cggtgagtct
     1861 gccgcgatgg acagcgtcgg caatcagggc gtcgatcatt tcctcgacga ttggcgagcg
     1921 gccggcggac agcatcgcga tcttttctgc tgtaacgtcg acgccaatga cctcatggcc
     1981 aagctccgca aggcaaccgc acgagacaac gccgacatag ccgatcccaa acaccgaaat
     2041 gcgcattatc aaccgtcctt cggtcaccaa ccgtcacggc aaggccatcc gggttcgaac
     2101 ctcccagctt ttccgttacc gggaggtata gaggtgcctt aacggaccat gcacgaagcg
     2161 tcaccggttt tggacggaaa ccgaccacgg gcaacccgcc ggctcagggg ctgccctttg
     2221 gccgcctcgc gtcaggtgtt caccttggcc atgagcgtcc cgatactgtc gatctcgggc
     2281 aggactttct cagccggcgc ggaatccaga ttgaacacca cgcgctcgac cccgaggtct
     2341 tcatagcgct tcatgaggtc ggggtctttg cgggggaacc agacggtgat ggcgatcgag
     2401 gccggatcgc ggccggcttc ggtggccatc ttgcggaatt cggggaacat gtcggcgatc
     2461 tccttatagc cgccgcgcgc cgcctgcggg atccagccgt cgccataacg gatcgcccgc
     2521 cgtgccgaat acgggaacgc gccaccgacg atgaccggcg ggtgcggctt gcggaccggc
     2581 ttcggccacg tcatcatcgg atcgaaattg acgaattcgc cgtgatattc cgctttggat
     2641 tgtgtccaga ttgctttcat cgcctcgatg ttctcgcgcg cacgcttgtg gcgggatttg
     2701 aattcggtgc cgtggttttc catctcgtcc tggttccaac cattgccgat cccgaacagg
     2761 aatcttccgc cggatacgtt gtcgattgag gccaccagct ttgcggtctg gatcggatca
     2821 cgctgctgga caaggcacac gccggtgccg accatcagcg tcttcgtggc cattgccgct
     2881 gccgtcagcg tcacgaacgg atccatgcag tcatagtatt tcttgggcag gtcgccgccg
     2941 ccggggaagg cggtcttgcg gctgagagga atatgggagt gctcgggcgc ccagactgat
     3001 tcgaagtcgc ggctttccaa cgcctgccca agttctcctg gacccatcga ataatcggtg
     3061 aagaacatgg aaacgccgaa tttcagcata ggtccctcct gacgtggtgg cggatgatgc
     3121 accggtttgc gtccggtctc cagggatggc ccagtctgat cagcggcgcc gacggcaggt
     3181 cagacggaag gccggtaagc catcgcggtc ccggaatggt cgtcgtccga actgaagatg
     3241 gaaatgcaca ctgaaatcgt gcaaaagtca ccgacgtaga tagacgctcg aactctgatc
     3301 acgttgagcg ctggcaccag aagcgtggga cggaactgcc cccgcaagtc gttgatgaca
     3361 ctgagtttca aatcggaatg gtgcccaggg gcggaatcga accaccgaca ctgcgatttt
     3421 cagtcgcatg ctctaccaac tgagctacct gggcgctttc gttcagcgaa gccgtccgaa
     3481 aacgcgccgc ttatagagag gtaagccgac cttgtccagc gccgcacccg gcgctcgcac
     3541 gcggcccgcg cgcaaggggc gcccgcgcaa gggaccccc
//
LOCUS       DATAVD010001928         6594 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2044283, whole genome shotgun sequence.
ACCESSION   DATAVD010001928 DATAVD010000000
VERSION     DATAVD010001928.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6594
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2044283"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1417
                     /locus_tag="VHX39_36765"
     CDS             <1..1417
                     /locus_tag="VHX39_36765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014105081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEX3996755.1"
                     /translation="MDASNLLKPALAQGTLRCIGSTTYKEYRQYFEKDRALVRRFQKI
                     DVNEPSVDDAIAILKGLKPYFEDYHRLKYTNEAIEAAVQLSSRYIHDRKLPDKAIDVI
                     DEVGASRMLLPENKRRKTVTLRDVEEIVAKIARIPPKSLSADDKETLRNLERDLKSMV
                     FGQDKAIDALAAAIKLARAGLREPEKPIGNYLFSGPTGVGKTEVARQLASTMGIELIR
                     FDMSEYMERHSVSRLIGAPPGYVGFDQGGLLTDAIDQHPHAVLLLDEIEKAHPDLFNI
                     LLQVMDHGKLTDHNGKTVDFRNIILIMTTNAGASDLAKEAIGFGRETRAGEDDDAIKR
                     LFTPEFRNRLDATIGFAGLTPEIVGRVVEKFVMQLEAQLADRNVTIEASSAAKEWLAE
                     RGYDKLYGARPLARVIQEYIKKPLAEELLFGKLVKGGSVKVTMKDDKLAFEIIEASVP
                     ALPKPEGEDEGGAGKEPEAVE"
     gene            1568..2317
                     /locus_tag="VHX39_36770"
     CDS             1568..2317
                     /locus_tag="VHX39_36770"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HEX3996756.1"
                     /translation="MDDLTPAGAVCGPDGCDISTEPETLNAQPGAGTRIDIVSDAICP
                     WCYIGKRQMERALVSLAGEGLAFSIHWNPFQLNPDMPKEGRDRAQYRAWKFGSAEKAA
                     ALDARIVDAAAQVGLEFHPARIKRTPNTIDAHRLIWFAGQNGVQDAAMEQVFGAYFIE
                     AQDIGDHGVLADCAAAAGLDRDQVMAFLAGDLADKQMRAADQAAREAGVSGVPSFFLD
                     GYGLFSGAMPHESMANAFRQGNKLLRERAPA"
     gene            complement(2343..3290)
                     /locus_tag="VHX39_36775"
     CDS             complement(2343..3290)
                     /locus_tag="VHX39_36775"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3996757.1"
                     /translation="MKILVTGATGVIGSRLIPRLVAAGHDVTAAVRSPERASDLAGAG
                     ARPVHVDLFDKSAVALAVHGQDAIINLATHLPDSMTALFRPGAWPENDRLRREASAGL
                     VDAGINDGVPRFIQESFALVYPGRGDEWIDETTELAPVRYNRTVADAEAAAERYTAAG
                     GVGVVLRFGAFYGPDAFQIRDFAQALRYGWALLPSRPDAFISSISHDDAAAATASVLD
                     VPAGTYNVVDDEPLSRRDYFNALAQALGLKEPHLLPGWTAVLFGSIGEMLARSLRISN
                     RKLRHAANWAPQYPSVRRGFPAMIAEMQASNDMSRDKAA"
     gene            3476..4768
                     /locus_tag="VHX39_36780"
     CDS             3476..4768
                     /locus_tag="VHX39_36780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEX3996758.1"
                     /translation="MPSKHPETLALHAGWRRDSATNSVAVPIYQTTSYQFDSSEHAAN
                     LFGLKELGNIYTRIMNPTNDALEQRLAALEGGVAALGLASGQAASAYSILNVARAGDN
                     FVSSTDLYGGTWNLFANTMKDQGIEARFVDPSDHEAFARATDDRTRAYYAETLPNPKL
                     IPFPIAEVAAIGRKFGIPLIMDNTAAPLLVRPFDHGAAVVMYSTTKYLGGHGTSIGGA
                     VIDGGNFDWEAHPTRQPMLNSPDPSYHGAVWSQAVKPLGPIAYILKMRVTLLRDLGAA
                     MAPFNAFLFLQGVETLALRMRAHSENTLAVANYLAERKGVSRVIHPSRHTGVGAQRTA
                     KYLPHGMGGLCGMELAGGVDAGRKFIDSLKMFYHVANIGDARSLAIHPASTTHSQLTE
                     SEQAATGVTPGYVRLSIGIEHIDDIIADLAQALDAAGA"
     gene            4765..5805
                     /locus_tag="VHX39_36785"
     CDS             4765..5805
                     /locus_tag="VHX39_36785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996759.1"
                     /translation="MTALTGVHLIGSVPMADAETVFRSVARELGPWLARIPDGETGTR
                     HRWIWWQREMLLNHPAMELDTDTPPFELRQWDGALLRTTEWLRFRSGIDSVSVTFDTG
                     YAQAAIESYATFGRLRDAGELPAGLRFQVCLPTPMASGYMYVSPSSLAAYLPVYERSL
                     LAALKKIVEAIPHQDLSIQWDVCQEVLVFEQFFPHRPASYKTDIFAELARLGDAVPAD
                     VECGYHLCYGSPRDAHVVMPTDTAILTEISNGLIDRLTRKLDFLHLPVPQDRTDAAYY
                     APLRELRLPAATMLYLGLIHRDDAAGDQARIAAASAFVPSFGIATECGWGRGDPEKIP
                     DLLAAHRHVMEH"
     gene            5805..6491
                     /locus_tag="VHX39_36790"
     CDS             5805..6491
                     /locus_tag="VHX39_36790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008492743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEX3996760.1"
                     /translation="MPVALITGGARGIGAAIASRLRHDGWDVVVADRDPAPIGRSVIC
                     DVSDEAAVASLIDDIRTTEGRLDALICNAGFGIRKPVEQLSLAEWSSVLATNLTSIFL
                     LVRAAASLLRSARGAIVTIASTRARMSEPNTEAYAASKGGIVALTHALAISLGPDVRV
                     NCISPGWILTKGPEPTPEEHAFHPSGRVGTPEDVAALAGFLVGPDSGFITGSEFVIDG
                     GVTRKMIYPE"
BASE COUNT         1264 a         2012 c         2062 g         1256 t
ORIGIN      
        1 gatggatgca tcgaacctgc tcaagcccgc cttggcgcaa gggacgcttc gctgcatcgg
       61 ttcaacgact tacaaggaat accgacagta tttcgagaag gatcgggcgc tggtccggcg
      121 gttccagaag atcgacgtca atgagccgtc agtggatgac gccattgcga tcctcaaggg
      181 tctgaagcct tactttgagg actaccatcg gctgaaatac accaacgagg ccatcgaggc
      241 cgcggtgcag ttgtcgtcgc gctacatcca cgaccgcaag ctgccggaca aggcaatcga
      301 cgtgatcgac gaggtcggcg cctcgcggat gttgctgccg gagaacaaac gccggaagac
      361 tgtgacgttg cgcgacgttg aggaaatcgt cgccaagatt gcccgcattc ctccgaaaag
      421 tttgtcggcg gacgacaagg aaacgctgcg caatctggag cgtgacctga aatccatggt
      481 gtttggccag gacaaggcga ttgacgccct ggcggcggcg atcaagctgg cgcgcgccgg
      541 cctgcgcgaa ccggagaagc cgatcggcaa ctacctgttc tccggcccga ccggtgtcgg
      601 caagaccgag gtggcgcggc aactcgcatc gaccatgggg atcgaactga ttcggttcga
      661 tatgtcggaa tatatggaac ggcacagcgt gtcgcggctg atcggtgcgc cgccgggtta
      721 tgtcgggttc gaccagggcg gattgctgac cgacgcgatc gatcaacatc cgcacgcggt
      781 attgttgctg gacgaaatcg aaaaggcgca tcccgatctg ttcaacatcc tgttgcaggt
      841 gatggaccac ggcaagctga ccgaccataa cggcaaaacg gtcgatttcc gcaacatcat
      901 cctgatcatg acgaccaacg cgggggcctc ggacctcgcc aaggaagcca ttggtttcgg
      961 tcgcgaaacc cgtgcgggtg aggacgacga cgcaatcaag cggctgttca ctccggaatt
     1021 ccgcaaccgg ttggatgcca cgatcggctt cgccgggctg acgccggaaa tcgtcggccg
     1081 ggttgtcgaa aagttcgtca tgcagcttga ggcgcaattg gccgaccgca acgtgacgat
     1141 cgaggcgtcc tcagccgcca aggaatggtt ggccgaacgt ggctacgaca agctctacgg
     1201 cgcccggccg ctggcccggg tgatccagga atacatcaag aaaccgctgg ccgaggaact
     1261 gctgttcggc aaattggtca agggcggctc ggtcaaggtg acgatgaagg acgacaagct
     1321 ggcgttcgag attatcgaag cctcggtgcc cgcactgccg aagccggaag gcgaagacga
     1381 aggcggcgca ggcaaggagc ctgaggccgt cgagtaaggc ggaccgttta caccgtccgt
     1441 catggccggg ctcgtcccgg ccacctgaac cagcaccgtc tcgcgactgg tggccggaca
     1501 agcccggcca tgacgcgggc aagagtgaaa acgtcacctg ggcaacaggg caaaaggaaa
     1561 cacgaccatg gatgacctta ccccggcggg tgccgtttgc ggcccagatg gctgcgacat
     1621 ttcgactgag ccggaaacgt tgaacgccca gcctggcgcc ggtacccgaa tcgacatcgt
     1681 ctcggacgcc atttgtccct ggtgctatat cggcaagcgc cagatggaac gggcgttggt
     1741 ctccctcgcg ggcgagggac tggcgttctc catccattgg aacccgttcc agctcaatcc
     1801 ggatatgccg aaggagggcc gcgatcgagc ccagtaccgc gcctggaagt tcggcagtgc
     1861 cgagaaggcg gcggcgttgg acgcaaggat cgtcgacgcg gcagcccagg tggggctgga
     1921 gttccatccg gcacggatca aacggacgcc gaataccatc gatgcgcacc gtctgatttg
     1981 gttcgcgggc cagaacggtg tgcaggacgc cgccatggag caagtgttcg gggcctattt
     2041 catcgaggca caggatatcg gcgaccatgg cgtgttggcc gattgcgccg cggcagccgg
     2101 gttggaccgg gatcaggtga tggcgttcct ggccggcgac cttgcggaca agcaaatgcg
     2161 ggccgctgat caggctgcgc gagaggccgg cgtcagcggc gtaccttcat ttttcctgga
     2221 cggctacggg ttgttctccg gcgccatgcc gcacgagtcg atggcaaatg cgttccgtca
     2281 ggggaataaa ctactgcggg aacgcgcgcc ggcttagctc agcccagtac tgccgacctg
     2341 ggtcaggctg ccttgtctcg cgacatgtcg ttactggcct gcatctcagc aatcatggct
     2401 ggaaagccgc gtctcacgct tgggtattgc ggtgcccaat tggctgcgtg tctcagcttt
     2461 cggttcgaaa tacgcagcga gcgtgccagc atttcgccaa tcgatccgaa caacaccgcg
     2521 gtccagcccg gcagaaggtg cggctccttc aagccgagag cctgcgccag cgcattgaag
     2581 tagtctcgtc gcgacagcgg ctcatcgtca accacgttgt aggtgccagc tggcacgtcg
     2641 agaactgacg cggtcgccgc cgccgcgtcg tcgtgcgaaa tcgatgatat gaacgcatcg
     2701 ggccgactgg gcaacaatgc ccatccgtat cgaagagcct gcgcgaagtc ccttatctgg
     2761 aacgcatccg gtccataaaa cgcgccgaat cgcaagacga caccaacgcc gccggccgcc
     2821 gtgtagcgtt ccgctgcagc ctcggcgtcg gcaacggtcc gattgtatcg caccggagca
     2881 agttcagttg tttcatcgat ccattcgtcg cctcggcctg ggtagacgag tgcgaaactt
     2941 tcctgaatga aacgagggac gccgtcattg atccctgcgt cgacaagacc ggcggatgcc
     3001 tcgcgacgca gccggtcatt ttctggccag gcgcctgggc ggaacaaggc ggtcatggaa
     3061 tccggcaaat gagtcgcgag gttgatgatg gcgtcctggc cgtgcaccgc caacgcgacg
     3121 gccgacttgt cgaacagatc aacgtgaacc gggcgcgctc cggcgccggc caggtcagat
     3181 gccctttcag gcgagcggac ggccgccgtg acatcgtgtc cggcggcaac gagcctcggg
     3241 atcaggcggg aaccgatgac gcccgtggcc ccggtgacca ggatcttcat ggcgcactat
     3301 gcctcgatcg tgaccgttgg cgttttggcc tcggctacca aacagacagc agaacctttg
     3361 gttccacggc atggaagttt tccgccggct ctggtgcttt ttcgcacgct cgcgtttacc
     3421 gccgctgcgc cgcgtgatac cccccggcaa caaagcaacc ccaaggagca ccgccatgcc
     3481 gtccaagcac ccggaaacgc tcgcccttca tgccggctgg cgccgcgaca gcgccaccaa
     3541 ctcggtggcc gtgccgatct accagaccac gtcctaccag ttcgacagct ccgagcacgc
     3601 cgccaacctg ttcggcctca aggaactggg caatatctat acccgcatca tgaacccgac
     3661 gaacgatgca cttgagcagc ggctcgccgc cctcgaaggg ggagtcgctg ctctgggcct
     3721 ggcatccggc caggcggcat cggcctattc aattctgaat gttgctcgcg ctggcgataa
     3781 ttttgttagt tccaccgacc tttacggcgg cacctggaat ctgtttgcca acacgatgaa
     3841 ggaccagggg atcgaggctc gtttcgttga tccgtccgac catgaggcct tcgcccgggc
     3901 gaccgatgac cgcacccgcg cgtactatgc ggaaacgctg ccgaacccga aactgatccc
     3961 gtttccgatc gccgaggttg ccgctatcgg ccgcaagttt ggcatcccgc tgatcatgga
     4021 caacaccgcc gctccgttgc tggtgcgtcc gttcgatcat ggtgcggcag tcgtgatgta
     4081 ttcaaccacg aaatatctcg gtggtcacgg cacctcgatc ggcggtgccg tgatagacgg
     4141 tggaaatttc gactgggagg cgcatccgac ccgccaacca atgttgaact cgcctgatcc
     4201 cagctatcac ggtgcggttt ggtcgcaggc ggtgaagcct ctgggtccga tcgcttacat
     4261 tcttaaaatg cgcgtcacgt tgctgcgcga tctcggcgca gcgatggccc ccttcaacgc
     4321 gttcctgttc ctgcaaggcg tcgaaactct cgcacttcgc atgcgcgcgc acagcgagaa
     4381 cacgttggcg gtcgccaact atttggccga gcgcaaaggc gtcagccgtg tcatccaccc
     4441 gtcgcgccac accggtgttg gtgcgcaacg aactgccaaa tatcttccgc atggcatggg
     4501 cggtctgtgc ggcatggaac ttgccggtgg cgtcgatgcc ggccgcaagt tcatcgattc
     4561 gctcaagatg ttttaccacg tcgccaatat cggcgatgcc cgcagcctgg ccatccatcc
     4621 ggcgagcacg actcattcgc aactcacgga gtcggaacag gcggcaaccg gcgtaacgcc
     4681 aggttatgtc cggctgtcga tcggcatcga gcacatcgat gacatcattg ccgacctcgc
     4741 gcaggcattg gacgcagcgg gggcatgaca gcgcttaccg gcgttcatct cataggcagc
     4801 gtgccgatgg cggacgccga gacggtgttc cgttcggtgg cgcgcgaact gggtccctgg
     4861 ctcgcgcgca tcccggatgg agagaccggc acccgccacc gttggatctg gtggcagcgg
     4921 gaaatgttgc tgaaccatcc ggccatggag ctcgacaccg acacgccacc gttcgagctg
     4981 cggcaatggg atggtgcgct gctccgcacc accgagtggc tccgcttccg ttccggaatc
     5041 gattcggtgt cagtgacgtt cgacactggt tacgcccagg cagcgattga gtcttatgcg
     5101 acgttcgggc gtttgcgcga tgcgggcgaa ctgccggcag gtctgcggtt tcaggtttgt
     5161 ctgcccacac cgatggcgtc gggttacatg tacgtcagcc cgtcgtcgct ggctgcgtat
     5221 cttccggtct acgagcggtc attgctggcg gcattgaaga aaattgtcga agcgatcccg
     5281 caccaggatc tttcgatcca gtgggatgtc tgccaggaag tcctggtttt cgaacaattc
     5341 tttccgcacc gtcctgcctc ctacaaaacc gacatctttg ccgaactcgc gcgactgggc
     5401 gatgctgtgc cggccgatgt ggaatgcggc taccaccttt gttatggctc cccgcgcgat
     5461 gcacatgtcg tcatgccgac agacaccgcg atactgaccg agatctccaa tggtctgatc
     5521 gatcggctca cacggaaact ggattttctg catttgccag tgccgcagga tcgaaccgat
     5581 gccgcttact atgcgccact gcgggagctg cgtttgccag ctgctacgat gctgtatctt
     5641 gggttgatcc atcgcgatga cgctgccggc gatcaggcgc gtatcgcggc tgcctcggca
     5701 ttcgtgccgt cgttcggaat tgcgaccgag tgtggctggg gacgcggcga cccggagaaa
     5761 atccccgatc tgctcgccgc gcaccggcat gtgatggagc actgatgccg gtcgcgctga
     5821 tcactggtgg cgcccgcggg atcggcgccg ccatcgcctc acggttgcgg cacgatggtt
     5881 gggatgttgt cgttgccgat cgcgatccgg caccgattgg acgttcggtc atctgcgacg
     5941 tctctgacga ggcggcagtc gcgtcgctga tcgacgatat tcgtaccacc gagggccgcc
     6001 tcgacgcgct gatctgcaac gccggtttcg gaatccgcaa accggtcgag caattatcgc
     6061 tcgccgaatg gtcgtcggtg ctggcgacca atctgaccag cattttcctg ttggtccgcg
     6121 ccgccgcgtc actgttgcgc agcgcgcgcg gagcgatcgt tacgatcgcc tcgacccgtg
     6181 cccgtatgtc ggagccgaac actgaagctt acgctgcgtc caaaggcggc atcgtggcac
     6241 taacccatgc gctggcgatc agcctcggtc cggatgtgcg ggtgaattgc atcagtccgg
     6301 gctggatttt gacgaagggt ccggagccaa cgccggagga gcacgcgttc catccctcgg
     6361 ggagagtcgg gacacccgag gatgtcgctg cgctggctgg atttctcgtt ggcccggaca
     6421 gtggcttcat tacgggctcc gaattcgtga tcgatggcgg ggtgacgcgg aagatgatct
     6481 atccggaatg acttcagggc caggggctgc cggatcaagg agcgcaaatg atgccgatga
     6541 tacaggatga accggaactc ctctttgagc catttccctc cgacgatctg cgcc
//
LOCUS       DATAVD010001929         1644 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1111677, whole genome shotgun sequence.
ACCESSION   DATAVD010001929 DATAVD010000000
VERSION     DATAVD010001929.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1111677"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..917
                     /locus_tag="VHX39_36795"
     CDS             <1..917
                     /locus_tag="VHX39_36795"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEX3996761.1"
                     /translation="VKVDRVEWVTMPDAQTAINALQSGDIDFLENPSFDLLPVLQANP
                     DLKIQVLNKLGFQTLGRMNFIHPPFDNVKVRRAAFLALNQKNVLDALVGNPEYYKVCG
                     AVFGCGTPLATDVGSESLVKGDGMAEAKKELAASGYDGTPVVIMGPGDVTTLKAQPIV
                     AAQLLREAGFKVDLQATDWQTVVSRRASQKPDSEGGWDMFFTNWVAADIWNPIANASV
                     SGRGKDGGWFGWADDPKVEAMRAEFAGATNPEDQKKIATEIQKEVYNQVIYVPLGQYT
                     IPSAWRKSLTGVLDGPATPIFWNIEKSE"
     gene            1082..1411
                     /locus_tag="VHX39_36800"
     CDS             1082..1411
                     /locus_tag="VHX39_36800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996762.1"
                     /translation="MSIADQFRPVVERRRAVFLRGRGTEVVALFVPVAGAALRVVLTG
                     HDVLLQLLHDNILLAVKFLSEANAGCRKTMKPGNALVRESKSKLYRESLAKERWAKDR
                     WPKETLA"
     gene            complement(1408..>1644)
                     /locus_tag="VHX39_36805"
     CDS             complement(1408..>1644)
                     /locus_tag="VHX39_36805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996763.1"
                     /translation="QPSLFGIDNIELEVEGQLNGKTVACSGRARHAPEVPFHVTLIRA
                     QDQPSAKSGTKRRPASPSIGPRQQFTPRPVIRPL"
BASE COUNT          332 a          461 c          528 g          323 t
ORIGIN      
        1 tcgtgaaggt ggaccgcgtg gaatgggtaa cgatgcccga tgcgcagacc gccatcaacg
       61 cgctgcagtc cggcgacatc gatttcctgg agaacccgtc gttcgacctg ttgcccgtgc
      121 tgcaggccaa tccggatctg aagatccagg tgctgaacaa gctcggcttc cagacgctag
      181 ggcggatgaa tttcatccat ccgccgttcg acaatgtcaa agtgcgccgc gcggcgttcc
      241 tggcgttgaa ccagaagaac gtgctcgatg cgctggtcgg caatcccgaa tattataagg
      301 tttgcggcgc ggtgttcgga tgcggcacgc cgcttgcgac cgatgtcggc tcggagtcgc
      361 tggtcaaggg cgacggcatg gcggaagcca agaaggaact ggctgcctcg ggttatgacg
      421 gcacgcccgt cgtgatcatg gggcctggcg atgtcaccac gctgaaggcg cagccgatcg
      481 tggccgcgca gttgctgcgc gaggccggct tcaaggtcga cctgcaggcg accgactggc
      541 agaccgtggt ctcgcggcgc gccagccaga agccggacag cgaaggcggc tgggatatgt
      601 tcttcaccaa ctgggttgcc gccgacatct ggaatcccat cgccaacgcg tcggtcagcg
      661 gcagaggtaa ggatggcggt tggttcggct gggcagacga tcccaaggtc gaggccatgc
      721 gcgctgaatt tgccggcgct accaatccgg aggaccagaa gaagatcgca accgaaatcc
      781 agaaggaggt ctataaccag gtgatctacg tgccgcttgg gcaatacacg attccgagcg
      841 cgtggcggaa atcgctcacc ggcgtgctgg atggtccggc aacgccgatc ttctggaata
      901 ttgagaagtc ggagtaaggc tttttacttt ggcgcgtttt ttttcacgcg aaccggctcc
      961 gcttcgcccg aaatcgctcc ccagagcatg atccggaaaa gtggaaaccg gttttccctc
     1021 gcgacaaacg cggaacgcgt ttgcgcggag atcatgctca aacaaggaga tgagatcagc
     1081 agtgagtatc gcggatcagt tccggcccgt cgttgaaagg cgacgggctg ttttcctgcg
     1141 ggggcgcgga acggaagtcg tcgccctgtt cgtgcccgtc gccggggcgg cgctccgagt
     1201 tgttctcacc ggccatgatg tcttgctcca attgctgcac gacaacattt tgttggcggt
     1261 gaagttcctc agcgaggcta atgcgggatg tcgcaagaca atgaagccag gcaatgcgct
     1321 ggtccgggaa tcgaagagca agctctatcg cgaatccttg gctaaagaac gttgggctaa
     1381 agaccgttgg cctaaagaaa ccttggccta aagcggcctg atcacgggac gcggcgtgaa
     1441 ctgttgccgc ggtccgatgc tcggacttgc cggccttcgc ttggtgccgc tcttggccga
     1501 tggctgatcc tgagcacgaa taagtgtgac gtgaaacggc acttccggcg cgtgcctggc
     1561 acgccccgaa caggcgacag tcttgccgtt caattggcct tccacctcga gttcaatgtt
     1621 gtcgataccg aacaaggagg gctg
//
LOCUS       DATAVD010001930         1781 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1854484, whole genome shotgun sequence.
ACCESSION   DATAVD010001930 DATAVD010000000
VERSION     DATAVD010001930.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1854484"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            6..>1781
                     /locus_tag="VHX39_36810"
     CDS             6..>1781
                     /locus_tag="VHX39_36810"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEX3996764.1"
                     /translation="MGPATGPIGYFTWLTQLDMRSARERWRTYLKGTDSPSLVAPRAR
                     MELLPRQSSLDTPIAPNLRARLDALARKHAITQATLFQVAWAFILARRLNRNDLCFGG
                     VASGRQAPVDGIEQMFGLFITTTPVRVRLDPRESLINLACRIQSEQAAMLDCQHVPLT
                     DIHRDVDFPALFDTLFTFENYPIQTNPGGDDELPLRLIRGHNGNHYPLSVAIIPDAEI
                     VVRLHYSEDVFTTREIAGIAAQIVWTLETITREPDTPTWRIDVTQALIEPGPTAAASG
                     DLPRFKPSLINAIEDAAASHGDNVALAYQGEQVTYAQLEQRANRIAALLCRDGVGPED
                     IVAIALPRSNLFFIAALGVWKAGGAILPLDPEEPEHRLALLLANARPRKVLTDGMFAK
                     RFGSDAVALDAQESESLPVVTAHRSGPIQPDRTAYMIYTSGSSGAPKAVVVPHRGLLN
                     LADEQAARMAITSGSRVAQIAAFTFDAAISEMAMTLSRGATLVVAPLDERAGPALADF
                     LTREAITHATLTPTALAATPMPDVWSMRSLIVAGEVATPQIVSPWAARCRVLNAYGPT
                     EATVCATMSDALLPDHDVPIGKPLAL"
BASE COUNT          314 a          576 c          546 g          345 t
ORIGIN      
        1 cgccgatggg gccggccacg ggtccgattg gctacttcac ctggcttacg cagctggaca
       61 tgcgttccgc gcgcgaaaga tggcgtactt atcttaaggg taccgactcg cccagtctcg
      121 tggcgccgcg ggcgcgtatg gagttgttgc cgaggcagtc gtcgctcgat acgcctatcg
      181 cgccgaacct ccgggccagg cttgatgcac tcgctcgtaa acatgccatc acacaggcaa
      241 cgctgttcca ggtggcctgg gcgttcattc tcgcgcgccg gctaaatcgt aacgatctgt
      301 gcttcggtgg tgtcgcttcc gggcggcagg cgccggtcga cggtatcgaa cagatgttcg
      361 ggctttttat caccaccacg ccggttcgcg ttcggctcga tccgcgcgaa tcgctgatca
      421 atcttgcctg ccgcattcaa tcagagcagg ccgcgatgct cgattgccaa catgttccgc
      481 tgacggacat ccatcgcgac gtcgatttcc ccgcgttgtt cgacacgttg tttacctttg
      541 agaattaccc gatccagacc aatcctggcg gcgatgacga actgccgctg cgactgatcc
      601 gtggtcacaa cggcaatcat tatccgctca gcgttgccat tattccggac gccgaaatcg
      661 ttgtccgcct gcactacagc gaggatgtgt tcaccacccg ggagatcgcg ggtatcgccg
      721 cccagattgt ctggacgctg gaaacgatca cgcgggagcc ggatacaccg acgtggcgta
      781 tcgacgtgac gcaagcgctg atcgagccag gccccaccgc cgcggcatcg ggtgacctgc
      841 cgcggttcaa accctccctg atcaatgcga tcgaggacgc ggccgcgtca cacggagaca
      901 atgtcgcatt ggcgtatcag ggcgagcagg ttacttacgc acagcttgag caaagagcta
      961 accggattgc cgcgctgctg tgccgcgacg gtgtcggccc agaagacatc gttgcgatcg
     1021 cgctgccacg ctccaatctg ttcttcatcg ccgcgttggg tgtctggaag gccggcggcg
     1081 caattctgcc gctcgatcct gaggagcccg agcatcgtct cgcgctgtta ctggcgaacg
     1141 ccaggcccag gaaggtgctt actgacggca tgttcgcgaa gcggttcggc tccgacgcgg
     1201 tcgcgctcga cgcgcaggaa tcagaatcgt tgcctgtcgt gaccgctcat cgtagcggcc
     1261 caatccagcc ggatcgtacc gcctacatga tttatacatc cggtagctcc ggcgcaccga
     1321 aggccgtggt ggtcccgcat cgcgggctgc tcaatctcgc cgatgagcaa gcggcccgca
     1381 tggcaatcac gagcggcagc cgtgtcgccc agatcgcggc cttcaccttc gacgcggcga
     1441 tttccgaaat ggcgatgacg ctgtcacgtg gcgccacatt ggtcgtcgca ccgctcgacg
     1501 agcgcgccgg ccccgcgctg gctgacttcc tgacgcgtga ggcgatcacg cacgcgactt
     1561 tgacgccgac cgcactggcg gcaacgccga tgcccgacgt ctggagcatg cgatcgctga
     1621 tagtcgcggg cgaagtggcg acgccgcaga ttgtctcgcc ttgggctgcc aggtgcaggg
     1681 tcctcaacgc ctatggtcct accgaggcga cagtctgcgc gacaatgagc gacgcgctgt
     1741 tgcccgacca tgacgtgccg atcggcaagc cgctggcact g
//
LOCUS       DATAVD010001931         1790 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2975188, whole genome shotgun sequence.
ACCESSION   DATAVD010001931 DATAVD010000000
VERSION     DATAVD010001931.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2975188"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..278)
                     /locus_tag="VHX39_36815"
     CDS             complement(<1..278)
                     /locus_tag="VHX39_36815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996765.1"
                     /translation="MSKFAIRLLTLAMFTMALVVVPLLTPAHASGDESPSPPASSGTK
                     KGKKDKSSSLEDGRFVAAYRAAYTTVYDRNDYTAAIEQLKALGHDDNAS"
     gene            544..897
                     /locus_tag="VHX39_36820"
     CDS             544..897
                     /locus_tag="VHX39_36820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996766.1"
                     /translation="MIDEPGHPTGYLVIPFEEETTMLKTISAALLAVSVLAAPAFAAG
                     HATSHVTKTAPVIKAEQVKQTKSNVLNANARMGRHHVRHVHRHRAHHRHVGALKTHKF
                     SKVSTRHITPAAKRG"
     gene            1116..1538
                     /locus_tag="VHX39_36825"
     CDS             1116..1538
                     /locus_tag="VHX39_36825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996767.1"
                     /translation="MGISAKCAAILLLPIVLAACAGGEDRDAAFTIDSGNEANQPFPN
                     NYRTELLAFMKTYLNNPAGVHDAVMAEPVQRTVGGRLRYVSCLRFSARETDGTYRPPR
                     DRAILYVNGRLDRVAENAAELCAGAVYAPFPEMEKLTR"
BASE COUNT          339 a          558 c          550 g          343 t
ORIGIN      
        1 gaagcgttgt cgtcgtggcc gagcgccttc aactgctcga tcgcggcagt gtaatcattg
       61 cggtcgtaga ccgtcgtgta ggcggcgcga taggccgcga cgaaacggcc gtcttcgagg
      121 ctggagctct tgtccttctt gcctttcttg gtgccggaag atgccggagg cgagggactt
      181 tcgtcgcccg aggcgtgggc aggggtgagc aggggcacca cgaccagcgc catcgtgaac
      241 attgccagcg tcaaaagcct gattgcgaat ttgctcattc gtcgctcccg attttcagtg
      301 agaatcatgc tgcacccgag ccttgagaca tgaacacccg ggcggccaga acattcccgg
      361 gccgtcaggc tttattgggg ccttttccgt tcggctccat gtcgatcgga tgtcgcccgc
      421 gtccgagcat ttcccccatg gtacggcggg cggaccgaac atgacaatca tgtcatccac
      481 atgaacgaag tccatcgctg agcttcaggg caggttcagc gcggcagctc tagggtcacg
      541 gccatgatcg acgagcccgg ccatccgacc ggctaccttg tgatcccctt tgaggaggag
      601 acgacgatgt tgaaaaccat ttccgcggcg ctgcttgcgg tttccgttct cgccgcgccc
      661 gcgttcgccg ccggccacgc caccagtcac gtcaccaaga ccgcgccggt gatcaaggcc
      721 gagcaagtga agcagaccaa gtcgaacgtg ctgaacgcca acgccaggat gggacggcac
      781 cacgttcggc atgtgcaccg tcatcgcgcc caccacaggc atgtcggtgc gctgaagacg
      841 cataagttct cgaaggtttc gaccaggcac atcacgcccg cagccaagcg cggctgacaa
      901 ctgatccacg gggggtggct cgtccacatt gcccccgccg ctcccggcgg atatcaggtc
      961 cggtccgcgc cattgcgtcc ccagtggtgc gggccggaat tgactctcga aggggccggc
     1021 gccgattgaa atgcggattc cctttgcagg ctggaaggtc tagaaccggc ctcggtccgg
     1081 aagcgcttgg gcgatggatt cgaacgggtc ggaacttggg aatatcagca aagtgtgccg
     1141 ccatcctgct gctgccgatc gtgcttgcgg cgtgtgccgg aggcgaggac cgggacgctg
     1201 ccttcacgat cgatagcggc aatgaggcca accagccttt tccaaacaac tatcgtaccg
     1261 aattgctggc gttcatgaag acttatctca acaatccggc cggcgtgcat gacgccgtca
     1321 tggccgaacc ggtgcagcgc accgtcggcg ggcggctgcg ctatgtgagc tgcctgcggt
     1381 tttccgcacg tgaaaccgat ggcacctacc gcccgccacg cgaccgcgcc attctctacg
     1441 tcaacggccg gctggaccgc gtggccgaga acgccgccga actctgcgcc ggcgcggtct
     1501 acgcgccgtt tccggaaatg gagaagctga cgcgctagcg ccgctgccga tgctccaaca
     1561 cgacgatcgg ccgtgaggcc aacgaaactt atccgctcaa ttcttcttga tggccggccg
     1621 gcgctgcgtc ggcgttgcgc aattgcacga atggtcatgg ccatcgattt gccgccgcaa
     1681 tcgcgcatta tcttccacga agttatcatg acgctgcgat tcgcacagcg tgacagagag
     1741 gttgcggcac gaacattgct tgaaatgaca acggggtagg ctttgacatt
//
LOCUS       DATAVD010001932         2282 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2228577, whole genome shotgun sequence.
ACCESSION   DATAVD010001932 DATAVD010000000
VERSION     DATAVD010001932.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2282
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2228577"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1637)
                     /locus_tag="VHX39_36830"
     CDS             complement(<1..1637)
                     /locus_tag="VHX39_36830"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3996768.1"
                     /translation="MAINRLAGLVLPASTKFLVDNIIGKRQVHLLVPLALALIAATAV
                     QGITSFTLTQLLSKAAQRMIADLRKQVQAHVGRLPVAFHDATKTGALVSRIMSDVEGL
                     RNLIGTGLVELAGSAMTAVFALVVLLRISVFMTTVASVILVAFGLALNKAIGTVRPIF
                     RARSKLTAEVTGRLTESLAGVRVVKGYRAEGREEHVFAGGVQRLLDNVLKTLTATSVM
                     SLSATVLLGLVSALVMYLGTTRILAGVMTLGTFLTYVAFLALLVAPVSQIVSIGTQLS
                     DGMAGLERTADILEEKPEDADPRRAVAMGTVRGEVEFDSVSFAYTTGSEVLHEVSFLA
                     RPGSVTALVGPSGAGKSTITGLIAAFYIPTEGRVLIDGVDLSTVRLESYRTQLGVVLQ
                     ETFLFDGSIRENVAFSRPDASEEDVLAACRIARVDEFAEAFSAGYDTVVGERGVKLSG
                     GQRQRISIARAILADPRILILDEATSSLDSESEALIQEGLSYLMRGRTTFVIAHRLST
                     IRRADQILVVEAGRIVERGTHETLYALGSRYFDLYTK"
BASE COUNT          489 a          759 c          626 g          408 t
ORIGIN      
        1 tgcttggtat agagatcgaa gtagcgactt ccgagagcgt acagggtttc atgcgtgccg
       61 cgttcgacaa tgcggcccgc ctccaccacc agaatctggt ccgcgcgccg gatcgtggac
      121 aggcgatgcg caatgacaaa cgtcgtgcgc cctcgcatca gatacgatag gccctcttga
      181 atcagcgcct ctgactccga atccaggctt gacgtggctt catccagaat caaaatccgc
      241 gggtcggcca agatggcgcg agcgatcgaa atacgctgcc gctgtccccc ggagagcttc
      301 acgccacgct cgccgacaac agtgtcgtag ccagcggaaa aggcttcggc aaattcatcc
      361 acccgcgcga tgcggcaggc cgccagcacg tcttcttcgc tcgcatccgg ccgcgagaac
      421 gccacatttt ctcgaatgct tccgtcgaaa agaaatgtct cctgcaacac caccccaagc
      481 tgcgtgcgat agctttccag gcgcaccgtg gagaggtcca cgccatcaat caaaacgcgg
      541 ccttcggtgg gaatgtaaaa cgccgcgatg agcccggtga tcgtggactt ccccgccccg
      601 gagggtccca ccagtgccgt gacgctgccg gggcgcgcga ggaaactgac ctcgtgcagt
      661 acctcgctgc cggtcgtata ggcgaaactc acggagtcaa attcgacctc gccgcgcact
      721 gtacccatcg ccactgcgcg ccgcggatcg gcgtcctcgg gcttttcttc caggatgtcc
      781 gcggtgcgtt ctaaaccagc catgccatcg ctcagttgtg tgccaatgct cacgatctgt
      841 gacacgggcg cgaccagcaa cgccaggaat gcgacgtagg tcaaaaatgt gcccagggtc
      901 atcacgccgg caagaatccg cgtggtgccc agatacatga ccagcgcgct caccagtccg
      961 agcaatacgg ttgccgatag gctcatcacc gatgtcgccg ttaaggtctt cagcacgttg
     1021 tcgagtagcc gctgcacccc gcccgcgaat acgtgctctt cgcgaccctc cgcgcgatag
     1081 cccttcacca cgcgcacacc cgcaagcgat tccgtcaggc gaccggtgac ctccgcagtt
     1141 aacttcgacc gcgcccgaaa aatcggtcgt accgtaccga tcgccttgtt caaggccagc
     1201 ccgaacgcca ccagaatcac cgaggccacc gtggtcataa acacgctgat gcgcagcagc
     1261 accacgagtg caaacaccgc cgtcatcgcg ctgcccgcca attccaccag gcccgtgccg
     1321 atcaaattac gcaggccttc cacgtcactc atgatgcgcg acaccaacgc gccggttttc
     1381 gttgcgtcgt gaaacgcgac cggaaggcgt ccgacatgtg cctgaacctg cttccgcagg
     1441 tcggcaatca ttcgctgcgc ggctttcgat aggagttgcg tgagcgtgaa agaggtaatc
     1501 ccctgcaccg ccgtggccgc gatcaacgcc aaagccagag gaaccagcag atgcacctgg
     1561 cgcttgccga taatgttatc aactagaaac ttcgtcgacg caggcaggac cagtcccgca
     1621 agccggttga tggccatcaa gccgaatccg aagaggagca accatcgctg gggccgaaca
     1681 aacggccaaa cctcacccag cagatggatc aatccaggcg acttagtatc ttcggaatgt
     1741 tcgtatccac ggccgcgacc tcgtccgcgc aggcccatcc catgcccgcc gcctccatgt
     1801 ggaagaatgg ccatgaccct attgtcttat atcccagcgc gaaatgcttg gccccgtcgt
     1861 gtgccgctgt acgtcctcgt gttcagcacc ctcgcggcta cacgcgggcc agtcgccgcg
     1921 gacaaaaagc agaatacaac gagggagctg ggcccggccc gcgcggatca agtccgcatt
     1981 ggattcggtc gatgatcttt cggtgaatga tctataggcg agatcgtcac acgaagcgac
     2041 atcgccggtc tgtccggcgc ccgcgtctcg taaactaatt gcacctgaaa aggctctgag
     2101 gctacagatg actcctgttc ccgaagtacc gtcggcggca cctgccgtac ccacggctca
     2161 actcattacc gccatgctca acggccgaga acacgtgagc gaccttatct tctcgcccgg
     2221 tcatgcgccg caagtggagg tgagcggcga actcgtggaa cttcgcttca aggggctcga
     2281 ac
//
LOCUS       DATAVD010001933         5512 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1298474, whole genome shotgun sequence.
ACCESSION   DATAVD010001933 DATAVD010000000
VERSION     DATAVD010001933.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 5512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5512
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1298474"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            29..664
                     /locus_tag="VHX39_36835"
     CDS             29..664
                     /locus_tag="VHX39_36835"
                     /inference="COORDINATES: protein motif:HMM:NF014816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX3996769.1"
                     /translation="MDDRLTLFGSFTSSSSYKPMLYLSLARLPFSFRTVNLKIGRQNE
                     PEHMARNRYGKVPVLQHRGLTIVQSNVILSYLAQTTGHFEGKTEQDRWTAREWLDWEP
                     DAISNVAKVRHYSRFRQVDPAVMEYFRPLAEAALSFVDKSVKGREWLVGDSPTIADIG
                     CWGRMVFMAEGGMNIENWPHLLAWSNRIKAMPGFALPYDLIPSKDREYDPA"
     gene            728..2233
                     /locus_tag="VHX39_36840"
     CDS             728..2233
                     /locus_tag="VHX39_36840"
                     /inference="COORDINATES: protein motif:HMM:NF015836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996770.1"
                     /translation="MPLPCAAAPSRLAGVVIALPVVLVLAFALRVVAFWTQTYVLFND
                     ETFQYFEQGHRLAFGTGVVPWEFVDGIRSWLLPGLIAGIMRLTALVGDDPLLYVRLTR
                     SLCAALSLIVVFAGFRLGWRQFGLLGAVVTGGFCAIWFDLIYFAPAVLTEVIAAHVAI
                     AAIYFGHGDVDRRRLLAVGALFGLAVCLRFQYGPALLAAALVQHRLYWARWRFLLLGG
                     LAVVVPVGGVLDAVTLGAPFQSIWLNLTRNALDHVSSGMGTKGADYYLEYLALTLGPA
                     AGLAIVGAFRMPALAIAAAVTLLLHSLVPHKEVRFIYLTIAVAPILIGLGAAWLIDRL
                     AQWHRWVAPGGATLVLGLAVLASWHIGSGVLGRRWQVERASVEVTLAAHAEPAMCGLL
                     VRDVWPWRSGGYTYLNRDVPLWYGYYDPNLKLPGTDRPEIVRVMRDGHEVPQFTLDRI
                     GANTRRFSHMIADQGWQEPGYTQVACFDDLDRADDEPPICLYRRPGGCEAD"
     gene            2295..3215
                     /locus_tag="VHX39_36845"
     CDS             2295..3215
                     /locus_tag="VHX39_36845"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: protein motif:HMM:NF005091.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HEX3996771.1"
                     /translation="MKIAVIGAGGVGGTFGAALAKAGADVWFLARGAHLDAMRTTGLR
                     IVSPRGDSHLVPTQASDDPAAIGAADVVLFCVKLWDVESAGERILPIVGPGTAVIPLQ
                     NGIDASDRLIPILGAGAVMGGVAQVSATIEGPGVVRQTGTFMRLVFGELNGERSARGE
                     AFLALCRKAGFDADLSEQIRTELWLKFIVLATNSAITAATRLPFGKLRGDADVMALFQ
                     AATKEVVAVGRAAGVPLPEDAAQRNMSFLAGAPAAMMASMAHDLIKGGRIELPWLSGK
                     VVAMGRELGVPTPVHEVLYAVLKPYVEGAG"
     gene            complement(3294..3635)
                     /locus_tag="VHX39_36850"
     CDS             complement(3294..3635)
                     /locus_tag="VHX39_36850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996772.1"
                     /translation="MNGGILHCIARVEPLPWYRLLVTWTSGDQSTADFTDDIKRGGIW
                     AALRDEAKFAQVRIAHNGCVLEWPEPAGPDGEPRIDVDADGLHEMASLQQTFEWLRRI
                     APTLPDRKGEA"
     gene            complement(3632..3892)
                     /locus_tag="VHX39_36855"
     CDS             complement(3632..3892)
                     /locus_tag="VHX39_36855"
                     /inference="COORDINATES: protein motif:HMM:NF025088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4160 domain-containing protein"
                     /protein_id="HEX3996773.1"
                     /translation="MPKVAVLPDRLRVCQFHHEHGPPHFHVQRAGHDTLITITDLRIL
                     RGALSATDLQTVTNWAFAHQGELALNWLLAQSRLDMRNIPFP"
     gene            4063..5016
                     /gene="argC"
                     /locus_tag="VHX39_36860"
     CDS             4063..5016
                     /gene="argC"
                     /locus_tag="VHX39_36860"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019462594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEX3996774.1"
                     /translation="MSTAKIFIDGESGTTGLGIRERLTALPSVTLKSLPSERRRDPAA
                     RRDIMAEVDLVVLCLPDDAAKESAALAASLGNASPKVLDASTAHRVDPTWVYGFAEML
                     PGQDKRIAEARQVANPGCYPTGGIGLIRPLVDAGIMPADFPVTINAVSGYSGGGKSMI
                     QAHATDHGPAFELYGLKLEHKHVPETQLYGGLTRRPIFVPSVGHFRQGMLVSVPLHLD
                     TLSGRPTGGDLIDVLQQRYAGCDLVRVVAPQADGKLGPEVLNGTDRMELSVHVNETHR
                     QAVLVARLDNLGKGASGAAVQNIGLMLGLFAGVGKRELADA"
     gene            5009..>5512
                     /locus_tag="VHX39_36865"
     CDS             5009..>5512
                     /locus_tag="VHX39_36865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEX3996775.1"
                     /translation="MPESPYGGFGPIFSLDGVTPTIAPDAFIAPTASIIGDVVVGSET
                     GIWFHCHVRGDLNSIRIGARTNIQDATVIHVDTGAMSTFIGDDVTVGHNAVIHACTLK
                     NRAFVGISATVLDGAVIEEGGMLAAGGLLTPGKVIGPNELWTGSPAKLRRVMDEDERK
                     RFDRNAEV"
BASE COUNT          906 a         1635 c         1866 g         1105 t
ORIGIN      
        1 gcttcaatga cggcaaggga cgaacatcat ggacgatcgg ctgacgttgt ttggcagttt
       61 cacctccagc tcgtcgtaca agccgatgct gtatctgtcg ttggcacggc tgccgttcag
      121 cttccgcacg gtgaacctga agatcggcag gcagaacgaa cccgagcata tggcgcgcaa
      181 tcgttacggt aaggtgccgg tgctgcagca tcgcggactg accatcgtgc agtccaatgt
      241 gatcctgagt tacctggcgc aaaccaccgg ccatttcgag ggcaagaccg aacaggaccg
      301 ctggacggct cgcgaatggc tggactggga gccggacgcc atcagcaatg ttgcgaaagt
      361 ccggcattac agccggttcc gtcaggtgga cccggcggtg atggaatatt tccgcccgct
      421 ggcggaggcg gcgctgagtt tcgtcgacaa atccgttaaa ggccgcgagt ggctggtcgg
      481 cgacagcccg acgatcgccg acatcggctg ctggggccgc atggtgttca tggccgaggg
      541 cgggatgaac atcgagaact ggccacattt gctcgcgtgg tcgaaccgga tcaaggcgat
      601 gccgggcttt gcgctgccct acgacctgat cccgtcgaaa gatcgcgagt acgatccggc
      661 ctgaacccgg aaaccaggcg gtaaggcatt tcacgccacg taaccacttg tgtcgtggaa
      721 ccagaccttg ccgttgccgt gtgcggctgc gccatcccgc ctggccggtg ttgtcatcgc
      781 cttgccggtg gtgctggtcc tggcatttgc tctgcgcgtc gtcgcgttct ggacccagac
      841 ctacgtcctg ttcaatgacg aaacgttcca atatttcgag caaggccacc gcctggcatt
      901 cggcaccggc gtcgtgccgt gggagttcgt cgacggcatc cgctcctggc tgctgcctgg
      961 cctgattgcc ggcatcatgc gcctgaccgc gctggtgggc gacgatccgc tgctctatgt
     1021 gcggctgaca cgttcgcttt gcgccgccct gtcgctgatc gtcgtcttcg ccggctttcg
     1081 actgggctgg cgccagttcg gtctgctcgg cgccgtcgtc accggaggct tctgtgccat
     1141 ctggttcgat ttgatctact tcgcccccgc ggtgctgacc gaggttattg cggcccatgt
     1201 cgcgatcgcc gcgatctatt ttgggcacgg tgatgtggat cgtcgccggc tgctggcggt
     1261 gggtgccttg tttggtctcg ctgtgtgcct gcgcttccag tacgggcccg ccttgctcgc
     1321 ggcggcgttg gtgcaacacc ggctgtactg ggcgcgctgg cgttttctgt tgctgggagg
     1381 tctggccgtc gtcgtgccgg tcggcggcgt gctcgatgca gtgacacttg gagcgccgtt
     1441 tcagtcgatc tggctgaatc tgacgcgcaa cgcgctcgat catgtcagca gcggcatggg
     1501 caccaagggg gccgactatt atctcgaata tctcgctttg acgttaggtc ccgctgccgg
     1561 attggctatt gtgggagcgt tccgaatgcc cgcgctggcg atcgcggctg cggtgacgtt
     1621 gctgctgcat tcgctggtgc cgcacaagga agttcgtttc atctacctga cgattgcggt
     1681 tgctccgatc ctgatcggat tgggcgctgc atggctgatc gatcggctgg cgcagtggca
     1741 tcgatgggtc gcgcccgggg gagcgacgct ggttctgggg ctcgcggttt tggcgtcctg
     1801 gcatatcggc agcggcgtgc tgggccggcg ttggcaggtc gagcgcgcca gcgtcgaagt
     1861 caccctcgcc gcgcatgccg agcccgcgat gtgcggcctg ttggtgcgcg acgtttggcc
     1921 gtggcggagc ggcggttaca cctacctcaa tcgcgacgtg ccgctgtggt atggttatta
     1981 cgatcccaac ctgaagttgc caggcaccga tcggccggag atcgtccgcg tgatgcgcga
     2041 cggacatgag gtgccgcagt tcaccctcga tcggatcggc gccaacacgc ggcgcttcag
     2101 tcacatgatt gccgatcagg ggtggcagga accgggctac acgcaggtcg cctgcttcga
     2161 cgacctcgac cgcgccgatg atgagccgcc gatttgcctg tatcgccggc caggcggctg
     2221 cgaggccgac tgaccgggct gtcaaaccgc gcgaaccgct ggcaccctgg ggtttgaatc
     2281 caaggagggg tcgcatgaag attgcggtga tcggcgccgg cggcgttggc ggaacgtttg
     2341 gcgcggcatt ggcgaaggcc ggcgcggatg tgtggtttct ggcgcgcggc gctcacctgg
     2401 atgcgatgcg gacgactggg ttgcgcatcg tcagtccgcg cggcgactcg catctggtgc
     2461 cgacacaggc gtccgacgat ccagcggcga tcggagccgc cgatgtcgtg ctgttctgcg
     2521 tgaaattgtg ggatgtggag agtgctggcg aacgcatttt acccatcgtc ggacccggca
     2581 ccgcggtgat cccgttgcag aacggcatcg acgcctcgga ccggctgatc cccatcctgg
     2641 gtgccggtgc ggtgatgggc ggcgtggcgc aggtgagtgc gacgatcgaa gggccgggcg
     2701 tggtgcggca gaccgggacg ttcatgcggc tggtgtttgg cgaactcaac ggcgaacgca
     2761 gcgcgcgggg cgaggcgttt ctggcgctgt gccggaaggc ggggtttgac gctgatctca
     2821 gcgagcagat cagaaccgag ctgtggctga agttcattgt gcttgccacc aacagtgcga
     2881 tcaccgctgc cactcggttg ccgttcggca agctgcgcgg cgatgcagac gtgatggctc
     2941 tgttccaggc ggcaacgaag gaggttgttg cggtgggcag ggctgcgggt gtcccgttgc
     3001 cggaggatgc ggcgcagcgg aacatgagtt tcctcgcggg ggcgccggcg gcgatgatgg
     3061 cctcgatggc gcatgatctg atcaaggggg ggcggatcga attgccgtgg ctgtcgggca
     3121 aggttgttgc gatgggccgg gaactgggcg tgccgacgcc ggtgcatgag gtgctgtacg
     3181 cggtgttgaa accgtatgtc gagggggcgg ggtaatgctg cgtgacccgg cgcatcgcgg
     3241 tttagttagt tatcaggggc tgcaccgtta cggtattacg accgcaagcc tgctcaggcc
     3301 tcgcctttac ggtccggcag cgttggggca atccgccgca gccactcgaa cgtttgctgt
     3361 aggcttgcca tctcatgcag cccgtccgca tcgacatcga tccgcggctc gccatccgga
     3421 cctgccggct ccggccattc cagaacgcaa ccgttgtgag cgatcctaac ctgggcgaat
     3481 ttcgcctcat cgcggagcgc agcccagatc ccgccccgct tgatgtcgtc ggtaaaatcc
     3541 gcggtcgatt gatcgcccga tgtccaggtc acgagcaaac gataccacgg aagcggctcg
     3601 acgcgcgcga tacaatgcag aatgccaccg ttcatggaaa aggaatgttt cgcatgtcga
     3661 gcctcgattg ggcgagcagc cagttcaacg caagctcgcc ctgatgcgca aaagcccagt
     3721 ttgtgacggt ctgaaggtcg gtggcggaga gggcgccacg taaaattcgc aggtcggtga
     3781 tggtgatcaa cgtgtcatgt cccgctcgtt gcacatgaaa gtgcggtggg ccgtgctcgt
     3841 ggtgaaactg gcagacccgc agccggtccg gaagcacggc gaccttcggc atctggaaca
     3901 cctccgttat gcacgcagga tcctcgcgcc gcgaccggtc gcgatccggg tgacgctatg
     3961 aacggcgcct gactgcgtca atggaattcc agccatcgtt tgccgcccct tgctttccgc
     4021 ggtccaaacc ctgatgttgc gccgcgaaag gaaccccggt tcatgagcac ggcaaagatc
     4081 ttcatcgacg gcgagtccgg caccacgggt cttggcatcc gcgagcgtct gactgcgtta
     4141 ccctccgtca ccctgaagag cctgccgtcc gagcgacgcc gtgatcccgc cgcgcgccgc
     4201 gacatcatgg ccgaggtcga cctcgtcgtg ctttgcctgc ctgacgacgc ggcgaaagag
     4261 tccgcagcac tggcggcttc cctgggcaat gcctcaccca aggtgctgga cgccagcacg
     4321 gcgcatcgag tcgatccgac atgggtttat gggtttgccg agatgctgcc cggccaggac
     4381 aaacgcatcg ccgaagcgag gcaggtggcc aatccgggat gttatcccac cggcgggatc
     4441 ggtctgatcc ggccactggt ggatgccggg atcatgccgg cggattttcc ggtaaccatc
     4501 aatgcggtgt ccggttactc gggcggcggc aagtcgatga tccaggcaca tgccaccgac
     4561 catggtccag cgttcgaact gtacggactg aagctggaac ataaacacgt gccggagacg
     4621 caactttacg gcggcctgac ccggcggccg attttcgttc cttcggtggg acatttccgc
     4681 cagggcatgc tggtttcggt gccgctgcat ctcgacaccc tgagcggacg accgaccggt
     4741 ggcgacctta ttgatgtgct gcagcaacgt tacgccggct gcgatctcgt gcgggtggtg
     4801 gcacctcagg cagacggcaa actggggccg gaggtcttga atggcaccga ccgcatggaa
     4861 ttgtcggtcc acgtcaacga gacgcaccgc caggctgtgc tggtcgcccg gctggacaac
     4921 ctcggcaagg gagcgtccgg cgcggcggtg cagaacatcg gtctgatgct tggtctgttc
     4981 gctggcgtcg gcaagcggga actggctgat gcctgagtcg ccgtatggcg gcttcggccc
     5041 gatcttctcg ctggacggcg tcacgccaac aattgcgccc gatgccttca ttgcccctac
     5101 tgcgtcgatc atcggcgatg tggttgtcgg atccgagacc gggatctggt ttcactgcca
     5161 cgtgcgtggc gatttgaatt cgatccgcat cggtgcgcgc accaacatcc aggacgccac
     5221 ggtcatccat gtcgataccg gtgcgatgtc gaccttcatc ggcgacgacg tgacggttgg
     5281 ccacaacgcg gtgatccatg cctgcacgtt gaagaatcgt gcgtttgtcg ggatcagtgc
     5341 aacggtgctg gatggtgcgg tgatcgagga aggcgggatg ctcgccgccg gcgggttgct
     5401 gacgccaggc aaagtaatcg ggccgaacga gttgtggacc ggttcgcccg caaaactccg
     5461 ccgtgtaatg gacgaggacg aacgcaagcg tttcgaccgc aatgccgagg tc
//
LOCUS       DATAVD010001934         4003 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3341260, whole genome shotgun sequence.
ACCESSION   DATAVD010001934 DATAVD010000000
VERSION     DATAVD010001934.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4003
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3341260"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..1245)
                     /locus_tag="VHX39_36870"
     CDS             complement(82..1245)
                     /locus_tag="VHX39_36870"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEX3996776.1"
                     /translation="MARRRELLGMTALAGAGLYFLWPRHWVGLLDPRSADLLVQPGGW
                     TSKRTVAYQAYDHQYPWPFGPPSDYRRNLKWELGSTPHARTGTAMELHEIRYFLALSR
                     TLNFTKAAEECHVSQPALTRAIRKLEDELGGILFHRERRNTHLTELGRLIEPHLRETV
                     THTGAAKQAAARFLTLEQASLSVGVMCTIAPVPFVTFLGRFRSEHPGVDLTLREAAPD
                     QLSELLLKGEIDVAIMARPDGFSEPLLATELYAERFVVACSAAHPFARRRDVAMAELD
                     GQFYFSRINCEFADTLGDLCRQQGVHLIRSYRSEREDWILTMVAAGLGICMLPEYTAS
                     FPGVAGCPIVAPSVCRSVCLVTVSHRQKSLPLEIFSKAVTDNFALLARSRTIR"
     gene            complement(1301..2017)
                     /locus_tag="VHX39_36875"
     CDS             complement(1301..2017)
                     /locus_tag="VHX39_36875"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: protein motif:HMM:NF015319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEX3996777.1"
                     /translation="MTPFAEILALAAERKGGMPALEQILVATAPRTPAQIASTEDDRI
                     LAEMTRRIFYAGFSAKVIDDKWPAFEKGFDGFDPNACAFMSEEHFDRLMQDRGIVRNG
                     AKIKSVQINGQFLLTLKAEHGSAARFFADWPDADYVGLLDVLKKRASHLGGDAAGRFL
                     RAIGKPAFIATPDMVAALIREGVIDRPPTGKRDLSTVQAAFNRWSEESGRDLTAISRI
                     LAMTVDSQLIPTPHRKSRAR"
     gene            complement(2230..3057)
                     /locus_tag="VHX39_36880"
     CDS             complement(2230..3057)
                     /locus_tag="VHX39_36880"
                     /inference="COORDINATES: protein motif:HMM:NF013232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside phosphorylase"
                     /protein_id="HEX3996778.1"
                     /translation="MRMDDRSLCLPPPILRAKHYRAPSAFTPESLLREARRQKDVPDM
                     PVPAICILDPDGDIVRYLRAANRTRPVAGWACYHSTMDRFDHGGREYGIVGCAVGAPY
                     AVLVAEQLFASGCRLLLSITSSGQVTTLGPPPYFILIERALRDEGTSYHYLSAGSDYA
                     EADPALLSIVQGALDTISDPVERGATWTTDAPYRETQQAIAAARAEGILAVEMEAAAL
                     YAFAEARRKPVLCFAHVTNQMGQCGDFEKGEENGATASLALVRAVAEAYLVSDCREA"
     gene            complement(3060..3326)
                     /locus_tag="VHX39_36885"
     CDS             complement(3060..3326)
                     /locus_tag="VHX39_36885"
                     /inference="COORDINATES: protein motif:HMM:NF018473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1223 domain-containing protein"
                     /protein_id="HEX3996779.1"
                     /translation="MRFWLAAAIGVPLPTQASAQPAVRRVVGDCFTSEGCSSWPPGDA
                     MVAALARTRPDLLLPLHVTDWNNPGWHNPCSFVAATQQRFSGTT"
     gene            3557..>4003
                     /locus_tag="VHX39_36890"
     CDS             3557..>4003
                     /locus_tag="VHX39_36890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996780.1"
                     /translation="MHDNPIHTFFQVLTGNIPDQLSLGGYRWFEVALYWVLLIGSLAI
                     AYANWRMDETQRTGTHVSIYAMRLVSAGMWYLGSLWKLPLPISGGFKFWLENSVKYSS
                     FHAHAAIMQVFLDHIAMVQPLIFLLETALAVSLMLGFMVRLAGVVGV"
BASE COUNT          760 a         1238 c         1256 g          749 t
ORIGIN      
        1 cggtccaata ccttccgctc attgagttga tagtcgccag gcatttgatc ctcgctcgcg
       61 ggaacggtgt cggcggttcc gtcacctgat ggttcggctc ctggccaaca acgcaaagtt
      121 gtcagtaaca gccttggaga aaatttccag cggcagggat ttttgccgat ggcttacggt
      181 caccaggcac acgctgcggc agacggaagg cgcaacgatc gggcatccgg caacacctgg
      241 aaacgaagcc gtatattccg gcaacataca gatgcccaaa ccggctgcga ccatcgtaag
      301 tatccagtct tctcgctcgc tgcggtatga gcggatcaga tgcacgccct gctgccggca
      361 caggtccccg agcgtgtccg cgaattcgca gttgatgcgg gaaaaataga actggccatc
      421 gagttcggcc atcgctacgt cgcgtcggcg ggcaaacgga tgggctgctg aacaggcgac
      481 gacgaaccgc tccgcgtaaa gctccgtcgc cagcaacggt tcggaaaatc cgtccggccg
      541 agccatgatg gcgacgtcga tttccccctt cagcaacagt tcggagagtt ggtcgggggc
      601 ggcctcccgc agcgtcaggt ccaccccggg gtgttcagac ctgaaccgcc caaggaaggt
      661 gacgaacggc actggggcga tggtgcacat gaccccgacg gagaggctgg cctgctccag
      721 cgtcaggaac cgcgccgcgg cctgcttcgc tgcgccagta tgggtgacag tttcgcgcag
      781 atgtggctcg atcagacgcc cgagttccgt cagatgggta ttgcggcgct ctcggtgaaa
      841 gaggatgccg ccaagttcgt cttccagctt gcggatcgca cgggtcagcg ccggctggct
      901 gacatggcat tcttcggccg ccttcgtgaa attcaaggtt cggctcagtg cgaggaagta
      961 tcggatctcg tgcaattcca tggctgttcc tgtgcgggcg tgaggggtgg agcccaattc
     1021 ccacttcagg ttccttcggt aatcggatgg cgggccaaac ggccacggat actggtggtc
     1081 gtaagcctga taagcaactg tcctcttcga tgtccagccg ccaggctgca ccagaagatc
     1141 ggcggaccgc ggatcgagca agccgaccca atgccggggc cacaggaagt agagcccggc
     1201 acccgccagg gctgtcatcc cgagtaattc gcgtcgcctg gccatcgccg cgcctccaag
     1261 gatgtttccg tgaacgtctt cggaagacag cccgacaggg ttaccgggct cgcgatttcc
     1321 gatgcggtgt cggaatcagt tgcgagtcca cggtcatggc aaggattcgg ctgatggctg
     1381 tcaaatcccg gcccgactcc tcggaccagc ggttgaatgc ggcttgtacg gtcgaaagat
     1441 cccgcttgcc agttggcggg cggtcgatga caccctcccg aatcaacgct gccaccatgt
     1501 cgggtgtcgc gatgaaggcc ggcttgccga tcgcccgaag gaaccggcct gcggcgtccc
     1561 caccgaggtg actggcgcgc ttcttcagga catccagaag acccacataa tccgcatccg
     1621 gccagtccgc gaagaaccgg gcggcactcc cgtgctctgc cttcagcgtc agcaggaatt
     1681 gaccgttgat ctgaaccgac ttgatcttgg cgccgttgcg cacgattccc cggtcctgca
     1741 tcaaccggtc gaaatgctct tccgacatga aggcacaggc attggggtcg aatccgtcga
     1801 agcccttctc gaaggcaggc cacttgtcgt cgataacctt tgccgaaaat ccggcgtaga
     1861 agatgcgccg tgtcatttcg gccaggattc gatcgtcttc tgtcgacgcg atctgcgccg
     1921 gcgtccgtgg cgctgtcgcc acgaggattt gctcgagcgc cggcatgccc cccttccgct
     1981 ccgccgccag cgcaaggatc tcagcgaaag gcgtcatgac cctggccctt caacacggga
     2041 atggcgatcg tttcgtgact gatcattctg catcgtattt tagtacggcc gcaccataat
     2101 gcaaagcacc ggccgtctgg aagcaaggat cgggtttacc cgcccagtat cgcgcatgat
     2161 agaagcgcga tacctcaatc ttggtttgaa gtatccgatt cacgcggcga accgtggtcg
     2221 cgtcgcgact cacgcttctc tgcaatcgga taccagatag gcttcagcga cggcacgcac
     2281 cagcgcgagc gacgccgtcg caccgttttc ctctcccttc tcgaagtccc cacattggcc
     2341 catctggttg gtaacgtgcg cgaagcacag cacgggtttg cggcgcgcct cggcgaacgc
     2401 ataaagcgcg gcggcttcca tttcgacggc cagaatgccc tcggcccgag cggcggcgat
     2461 tgcctgctgt gtctcccggt agggggcgtc ggtcgtccag gtggcgccgc gctccaccgg
     2521 atcgctgatg gtgtccaacg cgccctgcac aatcgacagc agcgccggat cggcctcggc
     2581 gtagtccgac ccggcggaca gatagtgata gctggtgccc tcgtcgcgca gcgcccgctc
     2641 gatcaggatg aagtagggcg gcggacccag cgtggtgacc tggccggacg aggtgatgct
     2701 gagcagcagg cggcagcccg atgcgaacag ttgctccgcc accagcacgg cgtagggtgc
     2761 gccgacggcg cagccgacga tcccgtattc gcggccgccg tgatcgaagc ggtccatcgt
     2821 gctgtggtag caggcccagc cggccacagg ccgcgttcgg ttcgcggcac gcaggtagcg
     2881 cacgatgtcg ccgtccggat cgaggatgca gatcgcggga accggcatgt cgggcacgtc
     2941 cttctgacgg cgggcctccc gcaacaggct ctccggcgtg aaggccgagg gcgctcggta
     3001 atgcttcgcg cgcaggatag gtggcggaag gcagaggctt cgatcatcca tgcgcatggt
     3061 caggtggtcc cggagaaacg ctgctgcgtt gcggcgacga acgaacaggg attgtgccaa
     3121 ccaggattgt tccagtcggt gacgtgcaag ggcagcagca gatccggccg tgtccgcgcc
     3181 aacgcggcga ccatggcgtc cccgggcggc caggatgagc agccttccga ggtgaaacag
     3241 tcgcccacga cccgccgaac ggccggttgg gcactcgctt gggtcggcaa ggggaccccg
     3301 atcgcggcag ccagccaaaa acgcatgtta cgctcccgaa tatacagcgg catggcggcg
     3361 cggaccgcga tcccgaacac cgttcctggt gcttccattc ggcgagaaga cggcatcggt
     3421 tacagccatc cgcatggcaa cggtcagtcc cgcgttaccg ggacaaaaat cgaattcccc
     3481 gcattccgtc agtaaccggc tcccgaaaat tcccgaacaa acgacatggc aacgcgaacc
     3541 tggtgagatg accgtcatgc acgacaatcc aatccataca ttctttcagg ttctgacagg
     3601 aaatattccg gaccagctca gcctgggcgg ataccgctgg tttgaagtcg cgctctattg
     3661 ggtgctgctg atcgggagcc tcgccattgc ctatgcgaac tggcggatgg atgagacgca
     3721 gcgcaccggc acgcatgtca gcatttatgc catgcggctc gtcagcgcgg gcatgtggta
     3781 cctgggctcg ctgtggaagc tgccgctgcc gatttcgggg ggcttcaagt tctggctgga
     3841 gaacagcgtg aagtacagct cgttccacgc acatgcggcg atcatgcagg tgttcctgga
     3901 tcatatcgcc atggtgcaac cgctgatctt cctgcttgaa accgctcttg ccgtgtcgct
     3961 gatgcttggc ttcatggtaa ggctggccgg cgtggtgggc gtg
//
LOCUS       DATAVD010001935         3033 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1482100, whole genome shotgun sequence.
ACCESSION   DATAVD010001935 DATAVD010000000
VERSION     DATAVD010001935.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3033
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1482100"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..250
                     /locus_tag="VHX39_36895"
     CDS             <1..250
                     /locus_tag="VHX39_36895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007283560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEX3996781.1"
                     /translation="SALKANDKVEVRGFGSFRTRQRNSRTGRNPKTGATVAVPAKRVP
                     FFKPSKELRDLVNPTEAAAKGHAKPKSAAVDPHHPPPM"
     gene            400..1233
                     /locus_tag="VHX39_36900"
     CDS             400..1233
                     /locus_tag="VHX39_36900"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEX3996782.1"
                     /translation="MTPASATPAIAVHDLSRTFNDFVAVDHINLSVEPGQFFGFLGPN
                     GAGKSTTIKMLTGLLAPSSGSIQILGEDLIAHPLEVKRQIGVVPEGMALFGRLTASEY
                     LQFVGRMYGLDKQTTAQRSEELLEFMSLANERKKLISDFSHGMGKKLALAAAVIHGPK
                     VLFLDEPFEGVDAIAAGLLKTMLQRMIGRGATIFLTSHVLEIVERLCSHIAIIHHGRI
                     VANGSLDELRAGVQARLAPVEGGAALAPQDRLTLEQIFLSIVGGEQGVERPEGELAWL
                     S"
     gene            1221..2960
                     /locus_tag="VHX39_36905"
     CDS             1221..2960
                     /locus_tag="VHX39_36905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996783.1"
                     /translation="MAELTSSAPKQAWTAPQTVAQFRAIAWLRWRILMNGFRRKGGAG
                     ELIGRILIFPMLSGVALFPTLGAGFAAWYFAAHGEMARVSWLLWAAFILCQLLNINLG
                     RPGTTFDPNELIRFPVRVHNFVAIRLFFGLLAPANIIVSLISLAIAVGASVAQPSLCV
                     YALIALAVFAAVNVLFTRMVFAWVDRWLSTRRAREVFTLLIFTVSMGFQWANVRFNPA
                     YNHHHHGTQVISQQRVGAVLHLYHRAQPLLAYLPPELTGSALIAAQHGRPFAFVGYVF
                     GTVLFAAAFLAIFALRMRTEFRGEVLSDVANAVAPLRKAKGLSISPAAALRAQPVTSS
                     ESLESRPPGSAVGTLLGKELLYVRRNTGLLYSLIVPVIMVFLFAGKMSIRGNSTWIVP
                     AAVAYTLLSVMPLSFNSFGLEGVGAQFYFLAPVRMRDVFLAKNLLSAALALVEIVMVL
                     GVIVYLSGRPPVQMIVLSLLWAGATLLIGLTLGNLRSVSAPKRIEFSRAAGKQASSVS
                     ALISMGVLVVLAGFGAGLLVAARLTHLNWILLPTFAALLAVGVAVYVFGLRGVERYAL
                     DHREEMFAELSKK"
BASE COUNT          465 a          887 c         1040 g          641 t
ORIGIN      
        1 cagcgcgctg aaggccaacg ataaggtaga ggttcgcggc ttcggcagct tccgcacccg
       61 acagcgaaac tcgcgcaccg gccgcaaccc caagacgggc gcaaccgtgg ccgtgccggc
      121 caagcgcgtt cccttcttca agcccagtaa agagcttcgc gatctggtga accccacaga
      181 ggccgccgcc aaaggccacg cgaagccgaa gtcggctgct gtggacccgc atcatccgcc
      241 gccgatgtag ctcggcgtcg ttggctgcgt cacggaatct ctgcaacttc tctgtacttc
      301 agggccgcat gccggcgcgc gggcgtgcgc tcgcagcaga ttcgactgcg agtgcgtgca
      361 ggagtgcgtg caggaaaatg ccgtacactc ggctgagcta tgacacctgc ctctgcgaca
      421 cctgccatcg ctgtccatga cctcagccgc accttcaacg atttcgtggc ggtcgaccac
      481 atcaacctgt cggttgagcc cggacagttc ttcggctttc ttggacccaa tggcgcgggt
      541 aagtcgacca ccatcaagat gctcaccggc ctgctggctc cgagcagcgg cagcattcag
      601 atcctgggcg aagacctgat cgcacatccg ctggaggtga agcggcagat cggcgtggtg
      661 cccgagggca tggcgctgtt cgggcgactc acggcttcag agtatctaca gtttgtgggg
      721 cgcatgtacg ggctggacaa acagacgacg gcgcagcgaa gcgaagagct gctggagttc
      781 atgtcgctgg ccaatgagcg gaagaagctg atctccgact tttcgcacgg catggggaag
      841 aagctggcgc tggccgcggc ggtgatccac gggccgaagg ttctgtttct ggatgagccg
      901 tttgaaggtg tcgacgcgat tgcggcgggg ttgctgaaga cgatgctgca gcggatgatt
      961 gggcgcgggg cgacgatctt tctcacgtcg catgtgctgg agatcgtgga gcggctgtgc
     1021 tcgcacattg cgatcatcca tcatggacgc atcgtcgcga acggatcgct cgatgagctg
     1081 cgcgcgggtg tgcaggcgcg actggccccg gtggagggcg gtgcggcgct cgctccgcag
     1141 gatcgcctga cgctcgaaca gatctttctc tccatcgtcg gcggcgagca gggcgtggag
     1201 cgtccggagg gcgagctcgc atggctgagc tgacgagcag cgcgccaaag caagcctgga
     1261 ccgcgccaca gacggtggcg cagtttcgcg cgattgcgtg gctgcggtgg cgcatcctga
     1321 tgaatgggtt tcgccgcaag ggcggagccg gcgaactgat cgggcgcatc ttgatctttc
     1381 cgatgctctc gggcgttgcg ctcttcccta ctctaggagc gggcttcgcg gcgtggtact
     1441 tcgccgcgca tggcgagatg gcgcgcgtga gctggctgct gtgggcggcg ttcattctgt
     1501 gccagctgtt gaatatcaac cttggccgtc ccgggacgac cttcgatccg aatgagctga
     1561 ttcgctttcc ggtgcgggtg cacaacttcg tcgcgatccg gctgttcttc gggctgctgg
     1621 cgccggcgaa catcatcgtt tcgctgatct cgctggccat tgcggtggga gcgagcgtgg
     1681 cgcagccgtc gctgtgtgtg tatgcgctga ttgcgctggc agtcttcgcc gcggtcaatg
     1741 tgctgttcac gcgcatggtc tttgcctggg tggatcgctg gctttcgacg cggcgtgcgc
     1801 gtgaagtctt cacgctgctg atctttactg tttcgatggg ctttcagtgg gcgaacgtca
     1861 gattcaaccc ggcctacaat caccaccacc acgggacgca ggtcatctca cagcagcgcg
     1921 tcggtgcggt gcttcacctc tatcaccgcg cgcagccgct gctggcgtat ctgccgccgg
     1981 agctgacggg ctccgctctg attgctgcgc agcacggccg gccgtttgca ttcgttgggt
     2041 atgtcttcgg gaccgtcttg ttcgccgcgg cgtttctggc gatctttgcg ctgcgcatgc
     2101 gcacggagtt tcgcggcgaa gtgctcagcg acgtcgctaa tgccgtcgct ccgctgcgca
     2161 aggcgaaggg cctctcgatc tctccggcgg cggcacttcg cgcgcagccg gtgacgtcat
     2221 cggaatcgct ggagtcgcgt ccgccgggtt cggcggtggg cacgctcctg ggcaaggagc
     2281 tgctgtacgt tcgccgcaac accggacttc tctacagcct gatcgttccg gtgatcatgg
     2341 tgtttttgtt tgcgggaaag atgtcgatac gcggcaactc cacctggatc gttccggcag
     2401 cggtcgcgta cacgctgctc agcgtgatgc cgctgagctt taacagcttt gggctggaag
     2461 gggtgggggc gcagttttat tttctggctc cggtgcggat gcgcgatgtg ttcctggcta
     2521 agaatctatt gagtgcggcg ctggcgctgg tggagatcgt gatggtgctg ggtgtcatcg
     2581 tgtatctgag cggacggccg ccagtgcaga tgatcgtgct ctcgctgctg tgggcgggcg
     2641 cgacgctgct gatcggactg acgctgggca atcttcgctc ggtgagcgca ccgaagcgga
     2701 tcgagttcag ccgcgcggcc ggcaagcagg cgtcttcggt gagcgcgctt atcagcatgg
     2761 gcgttctggt ggtgctggcg gggtttggtg cagggctgct ggtcgcggcg cgcctgacgc
     2821 acctgaactg gattctgctt cccacctttg ccgctcttct ggcggtgggg gtggcggtct
     2881 atgtcttcgg actccggggg gtggagcgct acgcgctcga tcatcgcgag gagatgttcg
     2941 ccgagctctc gaaaaaatag cctgcggctc gcttgttatt tggaggcagc gacgccgacg
     3001 acgctgagca ttcggccggt gaagccatgc tcg
//
LOCUS       DATAVD010001936         1828 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_555502, whole genome shotgun sequence.
ACCESSION   DATAVD010001936 DATAVD010000000
VERSION     DATAVD010001936.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_555502"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            44..>1828
                     /gene="leuS"
                     /locus_tag="VHX39_36910"
     CDS             44..>1828
                     /gene="leuS"
                     /locus_tag="VHX39_36910"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEX3996784.1"
                     /translation="MPEKTYDHNQIELKWHKRWEDESLYKAEENSSKPKFYVLEMLPY
                     PSGALHIGHVRNYSIGDALARHMWMRGFNVLHPMGWDAFGLPAENAAIQNNRPPRDWT
                     LSNIEKMKRTHRRFAFSYDWDREVTTCEPEYYRWNQWFFLRMMERGLAYRKQALVNWC
                     PVCCTVLANEQVVNGCCWRHETTPVEQRALEQWFLRTTAYADELLRDIGQLEGGWPER
                     VLTMQRNWIGRSEGAEVDFVVEGYGGSAPIKARVFTTRIDTIYGATCLILAPEHQIVA
                     TMLGPEAKAAAKKMIDARAQQGPGDVEKEGFDTGLYAINPFSGEQMPIWVGNFVLMGY
                     GTGAIMAVPAHDQRDFEFCRKYGIRITPVIRPLVDGGAGELPDPAAMTEASGDYGIVA
                     NSGPWDGLTSEDAKCRMAAHAKEKGFGQAAITFRIKDWGVSRQRYWGTPIPVIHCPTD
                     GVVPVPDDQLPVLLPRQIQITGTGRSPLDEVPEFVNVTCPKCGGPARRETDTMDTFVD
                     SSWYFYRYCDSKNSSAPFDKTKIDYWFPIDQYIGGVEHAILHLIYSRFWTKVMRDLGL
                     TSYDEPVRKLFTQGMVISNGSKMSKSKGN"
BASE COUNT          393 a          551 c          528 g          356 t
ORIGIN      
        1 atctaaacgg ctgagtctga gaaactgaaa ctctagcgtg gaaatgcccg aaaagaccta
       61 cgaccacaat cagatcgagt tgaaatggca caagagatgg gaggacgagt ctctttacaa
      121 agccgaggag aattccagta agcccaaatt ctacgtgctt gagatgctgc cttatccgag
      181 cggcgctctt cacatcggcc acgtccgcaa ctactcgatc ggcgacgcgc ttgcccgtca
      241 catgtggatg cgcggcttta acgtgctcca tcccatgggc tgggacgcgt tcgggcttcc
      301 tgccgaaaac gcggccatcc agaacaatcg gccgccgcgc gactggaccc tctccaacat
      361 cgaaaagatg aagcgcaccc accggcgctt cgccttttct tatgactggg accgcgaagt
      421 caccacctgc gaacccgaat actatcgctg gaatcagtgg ttcttcctgc gcatgatgga
      481 gcgggggctc gcctatcgca aacaggccct ggtgaactgg tgtccggtct gctgcaccgt
      541 tctcgcgaac gaacaggtgg tgaatggctg ctgctggcgc cacgaaacta cccccgtcga
      601 gcaacgggcg ctcgaacagt ggttcctgcg caccactgct tatgccgatg aattgctgcg
      661 ggacatcggg cagctcgaag gcggatggcc tgagcgcgtc ctcaccatgc aacggaactg
      721 gatcggccga agtgaaggcg cggaggtcga tttcgtggtt gagggttatg gcggctctgc
      781 accaatcaaa gcgcgtgttt tcaccacccg catcgatacc atctatggcg cgacctgtct
      841 gatcctggcc cccgagcacc agatcgtcgc aaccatgctc ggcccggagg cgaaagcggc
      901 cgcaaaaaaa atgatcgacg cccgcgccca gcagggtccc ggggatgtgg agaaagaagg
      961 ttttgacacc ggcctgtacg ccatcaatcc cttcagcggc gaacaaatgc ccatttgggt
     1021 gggcaacttc gtgctgatgg gttacggcac cggcgcaatc atggccgtgc ccgcacatga
     1081 ccagcgcgat ttcgaattct gtcgcaagta tggaatcagg atcacgccgg tgatccgccc
     1141 tctggtcgac ggaggcgccg gcgagttgcc tgatccggcc gccatgaccg aagcctccgg
     1201 tgactacggc atcgttgcaa attcgggccc ctgggacggc ttgaccagcg aagacgccaa
     1261 atgccggatg gccgcccacg ccaaagagaa agggttcggc caggcagcga ttacgtttcg
     1321 catcaaggac tggggcgttt cccgccagcg ctactggggc acgccgattc ctgttattca
     1381 ctgcccaacc gacggcgttg ttccggtccc ggacgaccag ttgcccgtcc tgttgccgcg
     1441 ccagattcaa atcacgggta ccggccgttc gccgcttgac gaggtccccg agttcgtcaa
     1501 cgtgacctgc ccgaaatgcg gcggtcccgc gcgccgcgag accgacacga tggatacctt
     1561 cgtcgattcg agctggtatt tttatcgcta ctgcgattcg aagaattcct cggctccgtt
     1621 cgataaaacg aagatcgatt actggttccc gatcgaccaa tacatcggcg gcgtggagca
     1681 tgcgattctg catctgattt actcccgatt ctggacgaag gtgatgcgcg atctcggtct
     1741 taccagctat gacgagccgg tgcgcaaact cttcacgcaa ggcatggtga tctccaacgg
     1801 gtcgaagatg tcaaagtcga aaggcaac
//
LOCUS       DATAVD010001937         6411 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2416855, whole genome shotgun sequence.
ACCESSION   DATAVD010001937 DATAVD010000000
VERSION     DATAVD010001937.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6411
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2416855"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..335
                     /locus_tag="VHX39_36915"
     CDS             <1..335
                     /locus_tag="VHX39_36915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996785.1"
                     /translation="TYWGDVAGAVAQEASGGINAVVERFIDSNKNAQQNAGAPGPPAE
                     GSGPAARGAADGGPASLAGPVPNNTTTALGSAPTSKGSPVPGTPKQSVLSSDGAGSGA
                     PAKPAATK"
     gene            407..1489
                     /locus_tag="VHX39_36920"
     CDS             407..1489
                     /locus_tag="VHX39_36920"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEX3996786.1"
                     /translation="MVVILPPREGFGAGRSGALGLLARRYATTPGFRTLVIGGEQSGP
                     PFPEVPFQPIKPAAWCPGNVNLRFVAAMIGTLRRVRPQLIEVHNRPEIARALAWLLPR
                     TPVGLLLNNDPVAMRAARSPAARLRLLRRLRPVMASSDYVARRFMEGIDPAAGRVEVL
                     HNCIDLDAVPPPANRENLVLFAGRVVADKAPDSFIRACALALPSLPGWRGEIIGADGM
                     SVTSRETDYVRNITVQAAEAGVTMSGYRDHPLVLEAMTRAAIVIVPSRWPEPFGLTAL
                     EALACGAPLIVSPRGGLPEVAGDAAVYANPDAPEEIAAAIVALAGDPVRRAALSAAGR
                     ERARRFDTKVAAARLAVLRRAALNGR"
     gene            1574..2170
                     /locus_tag="VHX39_36925"
     CDS             1574..2170
                     /locus_tag="VHX39_36925"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEX3996787.1"
                     /translation="MRDPGGKRELIKAQAMGLFVAHGVDAVSVRDIAAACDMKPSNLY
                     AHFASRDALVAELFHDGYGEYADIMANVVASPGPFRQRLDRLIREICRLHDKDTVRFR
                     FLVMTQHGFLQHVERSVRNPVEIICHAVAEAMDAGDIPRREVELMAMAIIGLIVQPAT
                     GLLYGRLTGKLLKRADTIVAMCWNVLSMPLNSDENRRT"
     gene            2170..5577
                     /locus_tag="VHX39_36930"
     CDS             2170..5577
                     /locus_tag="VHX39_36930"
                     /inference="COORDINATES: protein motif:HMM:NF005291.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[ACP]--phospholipid O-acyltransferase"
                     /protein_id="HEX3996788.1"
                     /translation="MSPIALLKTRRLGPLVLAQSCGALNDNLVKNAMVVLAIFQLQFG
                     GAGLSALAGALFIAPYALLSATAGKLADRFAKPRLIRLYKLLEVGLMALAGLAFLSGN
                     VPALLGVLVGLGLQATLFGPVKYGVLPELLAEDELIAGNGLIEATTFLCIVIGTVAGG
                     ALILLDRGTALVGAVGFLLALLGLFGAMRIPQAAPADPSLRIRWNLLTETRDLLRLAY
                     GQHGIWLCILGLSWFWTVGATLLTEFPVIARDTLHGDGSVMTLLLSVFAIGVGTGSIF
                     CAKLLHGEVSPRFVPFAALGISLFCWDFARATQAAGELANAASVVGSLQGWRIGLDLF
                     LLAGCGGIFSVPLYAIIQDGARPAERSRMVAANNVMNAVFMVLGSGAAAAMAWFGFNA
                     PHVLVVTAAANLLVAFWIVRILPHEVYRSLFRWFFRTFHGVTVRGLENYRAAGSRVVI
                     VSNHQSYFDACLIAAFLPDSPTFAVDTGQFKKWWAKPFLNAVDTFPVDAQSPYTLKRM
                     IEAVRDHDRKLMIFPEGRLTRTGALMKVYEGAGLVADKAHARILPISIDGPRFSHLGK
                     VASRIHRRWFPALTVNIWPSVDLTPVNAETLTPRERRMAIGRALQDVMVDAVFRSQNI
                     DRTLFGAILEAAHTHGKSTIIAEDTARTPITYRRLILGAVAVGRALAQEVPEGGRIGL
                     LLPNAVGSVVTFAGLQAFGRIPCLLNPSAGASNVLATCQTATIGTVVSSRDFIQRGKL
                     SRLVEQMAEQVRFVWLEDIRAGIGLREKVRAKLDALLPHRLPGAHADPGSPAVVLFTS
                     GSEGNPKGVALSHRNILANCAQLASVIDFHGGDIVFNAMPMFHSFGLTGGTILPLVSG
                     VRTFHYPSPLHYRIIPALIYDTDATICFGTDTFLNGWARYAHPYDFYAMRYIFAGAEK
                     VREETKRLFAERFGVRILEGYGATETAPVIALNTAMHCRPNTVGRLLPGIEHRLEPVP
                     GIEADGRLQVHGPNVMLGYYYSNEPGVLQPTPDGWYDTGDIVSISDAGFVSIMGRAKR
                     FAKIGGEMVSLAAAEALVLSLWPDNQHAVVFVPDSRKGERLILATTRPTADMNALLAH
                     GRGRGVPEIMIPRALLPLPSMPVLSTGKVDYPTVERLAREAEQSMAA"
     gene            complement(5583..>6411)
                     /locus_tag="VHX39_36935"
     CDS             complement(5583..>6411)
                     /locus_tag="VHX39_36935"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEX3996789.1"
                     /translation="NMLAISSTGAGYDMIDVDDCSKAGVIVLNQSGTNKEGVAEHALG
                     LILSLSKKIAVSDRAMRTVRNLDRRIYEGNDIRGKTLGIIGIGNIGSRVAELCRGLFQ
                     MTVLADDPYLTADQISARGAVKAELPDLLQRSDYVTVHCPRTKETFGMLGSAQFALMK
                     RTAYFINTARGGIHDEPALADAVTSGLIAGAGLDVFLHEPPDLDHPLLHIDNVIVTPH
                     NAGVTTESMLEMVTATAQQWIDIFHGKVPTRMVNPEAWPLYSQRFSELLGFAPDPLP"
BASE COUNT         1090 a         1952 c         2062 g         1307 t
ORIGIN      
        1 atacttactg gggcgatgtc gcaggcgccg tggctcagga agcctcgggc gggatcaacg
       61 cggtggtcga gcgtttcatc gatagcaaca agaacgccca gcaaaacgcc ggcgcccctg
      121 gtccgccggc cgaaggatcc ggtcccgcgg cgcgtggcgc agcggatggt gggcctgcct
      181 cgcttgcggg cccagtaccg aacaacacca caaccgccct gggctcggct ccgaccagca
      241 agggatcgcc tgtccccggc accccgaagc agagcgtcct ctccagcgat ggcgccggct
      301 ctggcgcgcc cgccaaaccg gcggccacaa agtgaccgag cggtcgcaaa cgcccttcgc
      361 tcattgtctc gcggaggacg ttcctttagc cggggatggt ccgctggtgg tagtgatcct
      421 cccaccgcgc gaagggttcg gcgccggtcg gtctggcgcc ctcgggttac tggcgcggcg
      481 ctatgccaca acgccagggt tccgcacctt ggtcatcgga ggggagcaat cggggccacc
      541 cttccccgag gtgccgtttc aaccgatcaa acccgccgcc tggtgtccgg gcaacgtcaa
      601 tctgcggttc gtcgcggcga tgatcggcac cctgcggcgt gtgcgcccgc agttgatcga
      661 agtgcataat cggcccgaga ttgcccgcgc gctggcctgg ctgctcccgc gaaccccggt
      721 cgggctgctg ctgaacaacg atccggtggc gatgcgagcc gcccgctctc cggccgcgcg
      781 gctgcgctta ttgcggcggt tgcggccggt gatggcgtcg tccgactacg tggcgcgacg
      841 gttcatggag ggcatcgacc ccgctgccgg ccgtgtcgag gtattgcata actgcatcga
      901 tctcgacgcc gtcccgccac cggcaaaccg ggagaatttg gttctgttcg ccggccgcgt
      961 ggtcgccgac aaagccccgg atagtttcat ccgagcctgc gcgcttgcac tgccttcgct
     1021 gcccggctgg cggggggaga tcatcggcgc cgacggcatg agtgtcacca gccgggaaac
     1081 cgattacgtc cggaatatca cagtccaggc cgcggaggcc ggggtgacga tgagcggtta
     1141 tcgcgaccat ccgctggtgc tggaggcaat gaccagagcc gccatcgtca tcgtccccag
     1201 ccgctggcct gagccgttcg ggctgacggc actggaggcg ttggcctgcg gggcgccgct
     1261 gatcgtctcg ccacgcggtg gcctgccgga agtcgcgggc gacgccgcag tctacgccaa
     1321 cccggatgcg cctgaggaga ttgctgcggc gatcgttgcg ctggcgggtg atccggtgcg
     1381 acgtgcggcg ctgtcggcgg ccggccgaga acgggctcgg cgcttcgata ccaaggtggc
     1441 ggcggcgcgg ctggcggttt tgcggcgcgc ggctctgaac ggtcgttaag cgagagcgtt
     1501 ataaattgct tgacaccggg gtcgcctgct gtcagaaaca tgaacgaaca gttgttcatc
     1561 atataggaaa caaatgcgcg accctggcgg caaacgcgaa ctgatcaaag cccaggcgat
     1621 ggggctgttc gtggcgcacg gggtggatgc ggtttcggtg cgcgatatcg ccgcggcctg
     1681 cgacatgaag ccgtccaacc tgtacgccca ttttgcctcc cgcgacgctc tcgtcgcgga
     1741 gttgttccat gacggttatg gcgaatacgc tgacattatg gcgaacgtcg tcgcctcacc
     1801 tggcccgttc cggcaacgcc tggaccgact gatccgggaa atctgccgcc tgcacgacaa
     1861 ggacacggtt cgtttccgct ttctggtgat gacccagcat ggcttcctgc agcacgtgga
     1921 acgaagcgtc cgtaacccgg tcgaaatcat ctgccatgcg gtcgccgagg caatggatgc
     1981 cggcgacatc cctcgccgcg aggtagaact gatggccatg gcgatcatcg gcctcattgt
     2041 ccaaccggca accgggcttt tgtacgggcg cctcaccggc aaattgctga aacgggccga
     2101 taccatcgtc gccatgtgct ggaatgtgct gtcgatgccg ctgaactctg acgaaaacag
     2161 gaggacgtga tgtctccgat tgctttgctg aagacacgcc ggctcgggcc actggtgctg
     2221 gcgcaatcct gcggtgcctt gaatgacaat ctggtgaaga acgccatggt cgtgctggcg
     2281 atctttcagt tgcagtttgg cggtgccggt ctgtccgcat tggccggggc attattcatc
     2341 gcgccttatg cgttgttgtc ggcaacggca gggaaattgg ccgatcgatt tgccaagccg
     2401 cgactgatcc ggctctacaa gttgctggag gtcgggctga tggccctggc cggcctggcg
     2461 tttctgtcag gtaacgttcc tgcgctgctt ggcgtgctgg tcggattggg cctgcaggcc
     2521 acgttgttcg gtccggtaaa atatggcgtc ctgccggaac tgctggccga ggacgagttg
     2581 atcgcaggta acggcttgat cgaggcgacg acgttcctgt gcatcgtcat cggcaccgtc
     2641 gccgggggag cattgatcct gctcgaccgc ggcaccgcat tggtcggcgc ggtgggtttt
     2701 ctgttggcgt tgctgggatt gttcggtgcg atgcggatac cgcaggccgc cccggccgat
     2761 ccttcgttgc ggatacggtg gaatttgttg acggaaaccc gtgacctttt gcggctcgct
     2821 tatgggcagc acgggatctg gctgtgcatc ctcggcctgt cctggttctg gaccgtcggc
     2881 gcaacgctgc tgaccgagtt tccggtgatc gcgcgcgaca cgctgcacgg cgacggctcg
     2941 gtcatgacct tgctgctgtc ggtgttcgcg atcggtgtcg gcaccggttc gattttctgt
     3001 gcaaaactct tgcacggcga ggtctcgccg cggtttgtgc cgttcgcggc gttggggatt
     3061 tcattgttct gctgggactt tgcccgtgcc acgcaagccg caggtgaact ggcgaatgcc
     3121 gcctcggtcg tcggctcgtt acaaggctgg cgaattgggc tcgacctgtt cctgttggcg
     3181 ggatgcggcg gcatattctc ggtgccgctc tacgcgatca tccaggacgg cgcgaggccg
     3241 gccgagcggt cacgcatggt cgccgcgaat aacgtgatga acgcagtgtt catggtgctc
     3301 gggtccggcg ctgctgcggc gatggcgtgg ttcggcttca atgccccgca cgtgttggtc
     3361 gtcaccgcgg cggcaaacct tctggttgcg ttctggatcg tccgcatcct gccgcacgag
     3421 gtctatcgtt cgctgttccg gtggttcttt cgcacgttcc atggcgtgac cgtccgcggt
     3481 ctggaaaatt atcgtgccgc cggatcgcgc gtggtgatcg tgtcgaacca tcaatcgtac
     3541 ttcgatgcct gtcttatcgc ggcgtttctg ccggacagtc ccaccttcgc tgtcgacacc
     3601 gggcagttca aaaaatggtg ggcgaaaccg tttcttaatg cggtcgatac gttcccggtc
     3661 gatgcgcaat cgccctacac cctgaaacgc atgatcgaag cggtgcgcga ccatgaccgc
     3721 aaactgatga tctttccgga aggccgcctg acacgtaccg gcgcgctgat gaaggtctac
     3781 gagggcgccg gtctggtggc cgacaaagct cacgcccgca tcctgccgat ctccatcgac
     3841 ggccctcgct tctcccacct cggcaaagtc gcaagccgca ttcatcggcg ctggtttccc
     3901 gctttgacgg tgaatatctg gccatcagtc gatctgacgc cggtgaatgc agaaacgctg
     3961 accccgcgcg aacggcggat ggcgatcggc cgagccctgc aggacgtgat ggtggacgcc
     4021 gtgttccggt cgcaaaacat cgaccgcaca ttgtttggtg cgatcctcga ggcggcgcac
     4081 acgcatggca aatcgaccat aatcgccgag gataccgccc gcacaccgat cacctatcgg
     4141 cgactgatat tgggcgcagt ggcggttgga cgcgctttgg cgcaggaggt gccggagggc
     4201 ggccggatcg ggctgctgtt gccgaacgcg gttggctcag tcgttacttt cgcgggactg
     4261 caggcgttcg gccgtatacc atgtctgctg aacccttcgg ccggcgcttc gaacgtgctg
     4321 gcgacctgcc aaacggcgac aatcggcacc gtggtctcca gccgcgattt cattcaacgc
     4381 gggaagttgt cccgacttgt cgaacagatg gccgagcagg tcaggtttgt ctggttggag
     4441 gatattcggg ccggcatcgg gttgcgggaa aaagtcagag cgaagctcga tgcgttgctg
     4501 ccgcaccggc tgcccggtgc gcacgccgac cccggcagtc cggcggtggt gctgttcacc
     4561 agcggttcgg aaggcaaccc caagggcgtt gcactgagtc atcgcaacat tctggccaat
     4621 tgtgcgcaac tggcctcagt gatcgacttt catggcggcg acatcgtgtt caatgccatg
     4681 ccgatgttcc attcattcgg tctgaccggc ggcacgatct tgcctctggt ctccggcgtg
     4741 cggaccttcc attatcccag cccgctgcat taccgaatca ttcccgccct gatttacgac
     4801 actgatgcga ctatttgctt cggtaccgat acgttcctca acggttgggc acgttatgcg
     4861 catccttatg atttctatgc catgcggtat atctttgccg gcgctgaaaa ggtccgcgag
     4921 gaaaccaaac ggctgttcgc ggaacggttt ggcgtgcgca ttctggaagg ctatggcgcc
     4981 accgagacag caccggtgat cgccctgaac accgcgatgc attgccggcc gaacacggtc
     5041 ggacgtttgc tgcccggcat cgagcatcgg ctggaaccgg ttcccggcat cgaagccgac
     5101 ggccggctgc aggtccacgg ccccaacgtc atgctgggct attactacag taatgaaccg
     5161 ggagtcctgc agcccacacc ggacggctgg tacgataccg gagatatcgt ttcaatctcc
     5221 gatgccggat tcgtttccat catgggacgc gcgaagcgct tcgccaagat cggcggcgaa
     5281 atggtgtccc tggcggctgc ggaggcattg gtcctgtcgc tgtggccgga caatcagcac
     5341 gccgtcgtgt ttgtccctga ctccagaaaa ggcgaacggc tgatcctggc caccacccgc
     5401 ccaacagcgg atatgaacgc gttgctggcg catggacgcg gacgtggggt gccggagatc
     5461 atgatccctc gtgcgttgtt gccgttgccg tcgatgccgg tgctgtcgac gggcaaggtc
     5521 gattatccaa ccgtggaacg attggcgcgg gaggcggaac aatcaatggc cgcttaactg
     5581 cgtcacggca aggggtcggg tgcgaagcca agcaattcgg aaaaccgttg cgaatacagc
     5641 ggccaggcct cggggttgac cattcgcgtc ggcaccttgc cgtgaaatat gtcgatccat
     5701 tgttgcgccg tggcggtgac catttccaac atcgattccg tggtcacgcc ggcgttgtgc
     5761 ggggtgacga tcacgttgtc tatatgtaac agaggatgat cgagatccgg tggctcgtgc
     5821 aggaaaacgt ccagaccggc accggcgatt agcccagacg tcacggcgtc tgccagggcc
     5881 ggctcgtcat ggattccgcc gcgtgcggta ttgatgaaat aagcggtccg cttcatcagc
     5941 gcgaattgcg cgctgcctaa catgccaaag gtctctttgg tgcgcgggca atgcaccgtg
     6001 acgtagtcgg accgctgcaa caggtcgggc aattcggcct tgacggcacc gcgggcactg
     6061 atctgatcag ctgtcagata cgggtcatcg gccagaaccg tcatctgaaa cagaccgcgg
     6121 cacagttcgg cgacccggga cccgatgttg ccgatgccga taatacctag cgttttgccg
     6181 cgaatatcgt tgccttcgta aatccggcgg tccaggttcc gcacggtccg catcgcccgg
     6241 tccgagaccg cgattttctt cgacagcgac aagatcaaac cgagcgcgtg ctcagcgaca
     6301 ccctccttgt tggtgcccga ctgattgagc acgatcacac cggctttgct gcaatcatcg
     6361 acgtcgatca tgtcatagcc ggcgccggtc gaactgatcg cgagcatatt c
//
LOCUS       DATAVD010001938         3490 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2229036, whole genome shotgun sequence.
ACCESSION   DATAVD010001938 DATAVD010000000
VERSION     DATAVD010001938.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3490
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2229036"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..1037
                     /gene="ppk2"
                     /locus_tag="VHX39_36940"
     CDS             27..1037
                     /gene="ppk2"
                     /locus_tag="VHX39_36940"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006793 - phosphorus metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HEX3996790.1"
                     /translation="MAKRLTDTLDSADTVNGHTTVTVEPPLIVESEPEITPAATRMIA
                     SLRHDPTAIRRLFESGEYPYKTPMRAKAYEAHMLELQRELLKAQRWVEKTGQRIVVLF
                     EGRDAAGKGGTIKRFTEHMNPRTARVVALQKPTERERTQWYFQRYIAPLPAAGEIVLF
                     DRSWYNRAGVERVMGFCTPNDYLEFMRQCPEVERMFSRSGISMIKFWFSVSREEQRRR
                     FASREVDPLKQWKLSPIDRASLDKWDDYTEAKEAMFFYTDTADAPWTIVKSDDKKRAR
                     LNAMQHFLDLIPYDEKDRSIVTGPDPLIVGASAHVIGSDMHIMNKAVHPALKRGREMA
                     AG"
     gene            complement(1074..2336)
                     /locus_tag="VHX39_36945"
     CDS             complement(1074..2336)
                     /locus_tag="VHX39_36945"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007004939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEX3996791.1"
                     /translation="MPALCRDCCTILVDTASVCPRCRPGRVVAHPQLFGLTIAHVDCD
                     AFYASVEKRDRPELASRPVIVGGGVRGVVSAACYVARMYGVKSAMPMFKALKACPDAV
                     VIRPDFEKYTKASRAIRTLMDELTPLVVPLSIDEAVMDLAGTEALHGAPPAVVLARFA
                     RRVEHEVGITVSIGLAGNRLMGKIAADRNKPRGFVVIGADEARSFLAGEPVRLLPGIG
                     PALTRRLATLGITRLGHLQILSDRDAMLRLGEDGPALVRRARGEDVRTVHPGRETKSV
                     SAETTFATDLTSVVDLERHLWRLSEKLARRLKGQDLAAAGVVLKLKTTNFASRTRAAR
                     LSAPTVLPDRLFGAARELLAREATGTAFRLIGIGANPLAPRDLADHGDLADTETPRLA
                     AAQAAIDSLRDRFGETSVIKGRALRSGR"
     gene            complement(2339..3238)
                     /locus_tag="VHX39_36950"
     CDS             complement(2339..3238)
                     /locus_tag="VHX39_36950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008494179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEX3996792.1"
                     /translation="MSQYRIGIDLGGTKIEIILLGPDGSELVRERIDTPSGYDATLAG
                     IAALVQAAESRVGVTASVGIGIPGVISPATGLVKNAHSIALNGHTFDHDIRQALGRQV
                     RVENDANCFALSEASDGAGAGQPVVFGVILGTGVGGGIVVHGNVIQGPHRVTGEWGHN
                     PLPWPQPNELPGRECWCGKRGCMETWVAGPSLARDCDGEGAHDASGIPARAAAGETKA
                     REALARHADRLARGLGQVVNLLDPDVIVLGGGLSNMTHLYTDVPPLLRHYVFSDVIET
                     PILQAKHGDSSGVRGAAWLWPAG"
BASE COUNT          707 a         1120 c         1060 g          603 t
ORIGIN      
        1 attgaagaat ggcgcggacg tgaatcatgg cgaaacgatt gaccgacaca ttggacagcg
       61 ctgataccgt gaacggccat accaccgtaa cggtcgagcc acccttgatt gtcgaaagcg
      121 aacctgaaat cacccctgcc gcgacgcgga tgatcgcatc gctgcgacat gatcctactg
      181 cgattcgccg cctgttcgag tcgggagagt atccctacaa aacgccgatg cgggcgaaag
      241 cctatgaggc gcatatgctt gaactgcaac gcgagttgct caaggcgcag cgttgggtag
      301 agaagaccgg gcagcgcatt gtcgtcctgt tcgaagggcg tgacgcagcg ggcaagggcg
      361 gcacaatcaa acgcttcacc gaacacatga acccgcgcac cgcccgggtg gttgcgttac
      421 agaagccgac cgaacgagag cggacacagt ggtacttcca acgctatatc gccccgttac
      481 ccgcggccgg agagatcgtg ttgtttgatc gctcctggta caaccgcgcc ggggtcgagc
      541 gggtcatggg cttctgcacg cccaacgatt atcttgagtt catgcggcaa tgtccggaag
      601 tcgaacgcat gttctcccgt tccggtatca gcatgatcaa attctggttc tcggtgagcc
      661 gcgaggaaca gcgccggcgc tttgcctcgc gtgaggtcga cccgctgaag caatggaaac
      721 tttcgccgat cgaccgcgct tcgttggaca aatgggatga ctataccgag gccaaagagg
      781 caatgttctt ctataccgat accgcggatg caccctggac catcgtcaag tccgatgaca
      841 agaagcgcgc ccgcctgaat gcgatgcagc atttcctgga cctgattcct tacgacgaaa
      901 aggaccgcag tatcgtgacc ggtcccgacc cgctgattgt cggggcaagc gcgcatgtga
      961 tcggcagcga catgcacatc atgaacaagg cggtgcaccc ggccctgaag cgcggccggg
     1021 agatggccgc aggctaacgc ggttatcagc cgccggtcgc cgccaacgat ctgttatcgt
     1081 ccggacctca atgcccgtcc cttgatgacc gaggtttcgc caaaccggtc acgtaacgag
     1141 tcgatggctg cttgtgctgc agccagccgc ggcgtctccg tatccgccag atccccgtga
     1201 tccgccagat ccctgggcgc caacggattg gcgccaatgc cgatcaggcg gaaagcggtg
     1261 ccggtcgcct cgcgtgccag cagttcgcgg gcggcgccga acagccggtc agggagcacg
     1321 gtcggtgccg acaaacgcgc ggcccgggtc cgcgaggcaa aattcgtggt cttcaacttc
     1381 aacacgactc cggctgcggc aagatcctga cccttcagcc gtcgcgcaag cttttcggaa
     1441 aggcgccaca aatgccgttc cagatccaca acagaggtca gatcggtcgc aaacgtcgtt
     1501 tcggcactga cggatttggt ttcgcgtccg ggatggacgg tgcgaacatc ctcgccgcgg
     1561 gcgcggcgca cgagggcggg gccatcctca cccaatcgca gcatcgcgtc acgatcgctc
     1621 aatatctgca agtgaccgag acgcgtgatg ccaagtgtcg ccagccggcg agtgagtgcc
     1681 ggaccgatgc cgggcagcag gcgcaccggt tcacccgcca aaaaactccg cgcttcatcc
     1741 gcccctatca ccacgaaccc gcgcggcttg ttccgatcgg cggcgatttt gcccatcagc
     1801 cgattacctg cgagcccgat ggaaaccgtg atgccgactt cgtgttcgac ccgccgcgcg
     1861 aaacgggcca gcaccacggc gggcggcgca ccatgcaggg cttcggtgcc ggcaaggtcc
     1921 atcactgcct catcaatcga cagcggcacc accaacggcg tcagttcgtc catcaaagtt
     1981 cgtatggcgc gggaggcctt ggtgtatttc tcgaagtccg gccggatgac aacggcatcc
     2041 gggcaggcct tcaacgcctt gaacatcggc atcgcgctct tcacgccata catgcgcgcg
     2101 acgtaacagg cggccgacac gacgcctcgc acaccgccgc cgacgatcac gggccgcgat
     2161 gcaagctcag gccggtcgcg cttttccacg ctggcgtaaa acgcatcaca atcgacatgg
     2221 gcgattgtga gaccgaacaa ctgcggatga gcaacgaccc ggccgggacg gcagcgcgga
     2281 caaaccgatg ccgtatcgac aaggatcgtg caacaatcgc ggcacagtgc cggcatgatt
     2341 atcctgccgg ccagagccac gcggcgccgc gcacacccga agaatcgccg tgcttcgctt
     2401 gcagaatcgg ggtttcgatc acatcgctga acacatagtg ccgcagcagc ggtggtacgt
     2461 ccgtgtaaag atgcgtcata ttcgacaatc cgccgccaag cacgatcacg tcgggatcca
     2521 gcaggttcac gacctgcccg aggccgcgtg ccagccggtc ggcatgacgg gccagcgcct
     2581 cgcgcgcttt ggtttcgccg gcggcggcac gggcgggaat gccggatgca tcgtgcgctc
     2641 cctcgccgtc gcaatcgcga gccagtgaag gaccggcaac ccaggtttcc atgcaaccac
     2701 gtttgccgca ccaacattct cggccgggca actcgttcgg ctgcggccag ggcagcggat
     2761 tgtggcccca ttcgccggtg acccggtgtg gtccctggat cacgttgccg tgcacgacga
     2821 tgccgccgcc aacgccggtg ccgaggatga cgccaaacac cacgggctgg ccggctccgg
     2881 cgccgtccga agcctcgctg agtgcaaagc aattggcatc gttttcgacc cggacctgac
     2941 ggccaagcgc ctggcggatg tcatggtcga aggtatgacc gttgagcgcg atcgagtggg
     3001 cattcttcac cagaccggtc gccgggctga tgaccccggg aatgccgatg ccgaccgacg
     3061 cggtcacacc aacccgggac tccgctgcct gcaccagggc ggcaatgccg gccagcgtgg
     3121 cgtcgtaacc ggacggcgtg tcgatgcgct cccgcaccag ttcgctgccg tccgggccga
     3181 gcaggataat ctcgatcttg gtgccgccca gatcgatccc gatacggtat tgcgacatga
     3241 attgcaccct tttgactggt ggagccgaga agctggcgaa gcaacggggt tcgtcacgat
     3301 acaatgaaaa ggttgcccga ttggcctgat ttggtccagt tgcaagccac gccatgtgca
     3361 cagcgaatta tcccggcgga tccaggactg ttcgcaaagt tctggtacac gtctttgctt
     3421 attgcccagg ccagggccag tgatgccgga acatggcccg cggccggccg catccttaca
     3481 taaccaccct
//
LOCUS       DATAVD010001939         2140 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2229304, whole genome shotgun sequence.
ACCESSION   DATAVD010001939 DATAVD010000000
VERSION     DATAVD010001939.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2140
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2229304"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            49..1263
                     /locus_tag="VHX39_36955"
     CDS             49..1263
                     /locus_tag="VHX39_36955"
                     /inference="COORDINATES: protein motif:HMM:NF018458.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1217 domain-containing protein"
                     /protein_id="HEX3996793.1"
                     /translation="MDLAISSLGIPDGVVGWNILQKAKPASFTAFMNDPVLKQQIAYF
                     EKNAASATSAKDLLSNYQLQNFALTAFGLSSEQNMNGFMTKVLNSAPGSTTSFAASLT
                     DPRFTAIAKAFNYGGPTTPAVPATASTAQVAIGNLRQGSSFSSFSGTFAGVTVSNLNL
                     SGVTTWQGLAGALQTAFRQADGNTSTISVTLNGLYLKFSDSQGRGTASTMTFTADPAN
                     NVAQPTASAPFALVAGALAKPATGGPAVTNADFIKQVVQQYTEAQFQAVVGNTSNTLR
                     EALYAKQQLPSITNWYSVIANRPLADVIQTVLGLPQSFAMIDVDQQVKVLASRMNIAN
                     FQNPTKLNALLNQFVAMSQSTAAPQSAALTLLQDNNSDSGFINLMIPTTPLPDSLASN
                     SAVALLQSTAIG"
     gene            complement(1264..>2140)
                     /locus_tag="VHX39_36960"
     CDS             complement(1264..>2140)
                     /locus_tag="VHX39_36960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030257 - type III protein secretion
                     system complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0046034 - ATP metabolic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FliI/YscN family ATPase"
                     /protein_id="HEX3996794.1"
                     /translation="LDVFVPVCQGQRLGIFAASGVGKSTMMGMLARFVAADVIVVGLI
                     GERGREVREFLDTILGEAGLNRSVVVVATSDQPALARRRAAHATLSIAEWFRDSGKQV
                     LCLLDSVTRLAQAQREIGLAAGEPATARSFTPSVFAELPALLERAGPGSGSAGDITGI
                     FTVLVDGDDHDEPVSDAVRGILDGHLVFDRQIGERGRWPAVDVLRSVSRALPRCHAPK
                     ENELLARSRRLLSAYEGMADMIRLGAYRVGSDLLVDEAIRKYDDFENFLRQGVDERCP
                     ADEAFAALEKILDGE"
BASE COUNT          445 a          682 c          631 g          382 t
ORIGIN      
        1 ctcgcggtcg cggcatacta gcgcaacccc aggttcggca gacagcacat ggatctggca
       61 atctcaagtc tgggtattcc agacggggtg gtgggttgga acatcttgca aaaggcaaaa
      121 cccgccagct ttaccgcgtt catgaacgac ccggtgctga agcagcagat tgcctatttc
      181 gagaagaacg ccgcctcggc cacgtcggcc aaagatttgc tgagcaacta ccagctgcag
      241 aatttcgcac tgacagcgtt tggactttcg tcggagcaga acatgaatgg cttcatgacg
      301 aaggtgctga actcggcgcc aggcagcacg acgtcgttcg ccgccagtct gaccgatccg
      361 cgcttcacgg cgattgccaa ggcgttcaat tatggtggtc cgaccacgcc cgcggtgccg
      421 gccaccgcat cgaccgcgca ggtcgcgatc ggcaatctgc gtcagggcag cagtttctcg
      481 agtttttctg gcaccttcgc cggcgtcacg gtaagcaatc tcaacctcag cggcgtgacg
      541 acgtggcagg gcctcgccgg cgcgctacag acggcgttcc gtcaggcgga cggtaacacc
      601 agcactatct cggtcacgct gaacgggctt tatctcaagt tcagcgacag ccaggggcgc
      661 ggtacggcat cgaccatgac gtttaccgcc gatccggcca ataacgtcgc acagccgacc
      721 gcgagcgcac cgttcgctct tgtggctggc gcgctggcaa agccggctac cggcgggcca
      781 gcggtgacca atgccgactt catcaagcag gttgttcaac aatacaccga ggcgcaattt
      841 caggcagtag tcggaaatac ttcaaataca ttgcgggagg cgctgtatgc caagcagcaa
      901 ctaccttcca tcaccaattg gtattcggta attgccaacc gcccgttggc cgacgtcatc
      961 cagaccgtac ttggactgcc gcagagtttc gcgatgatcg acgtggatca gcaggtgaag
     1021 gtactggctt cgcgaatgaa tatcgccaac ttccagaacc cgaccaagct gaacgcgctg
     1081 ctgaaccaat tcgtcgcgat gagtcagtcg acggcggcgc cacaaagcgc cgcgttgacg
     1141 ctgttgcagg ataacaactc cgacagcggc ttcatcaatc tgatgattcc caccacgcca
     1201 ctgccggaca gccttgccag caactcagcc gttgcgttgc tgcaaagcac ggcgatcggc
     1261 tgatcattcg ccgtcgagga ttttttccag cgcggcaaac gcctcatcgg ccgggcaacg
     1321 ttcgtcgact ccctggcgga ggaagttttc gaaatcatcg tatttgcgga tcgcctcgtc
     1381 gaccagcagg tcggaaccca cgcggtatgc accgaggcgg atcatgtcgg ccattccttc
     1441 gtatgctgag agcaggcgtc gcgagcgggc cagcagttcg ttttccttcg gggcatggca
     1501 gcgcggcaac gcacggctga ccgagcgcag cacgtctacg gccggccagc ggccgcgctc
     1561 gccgatctgg cgatcgaaca ccaaatgacc gtccaaaatc ccgcggacgg catccgagac
     1621 cggctcgtca tggtcatcgc cgtccaccag caccgtgaaa attcccgtaa tatctcccgc
     1681 gctccccgat cctggaccgg cccgttcgag caacgccgga agttctgcga aaaccgatgg
     1741 ggtgaaggag cgggccgttg ccggttctcc ggccgccagg ccgatttcac gttgcgcctg
     1801 tgccagacgc gtgacgctgt ccagcaggca caacacctgc ttgccggagt cgcgaaacca
     1861 ctcggcgatc gacagtgtgg catgggcggc acggcgtcgc gccaaggccg gctggtccga
     1921 agtggcgaca acgacaactg atcggttcag cccggcttcg cccaaaatgg tgtcgaggaa
     1981 ttcgcggacc tcgcggccgc gctcgccgat caatccgacg acgataacgt cggcggcaac
     2041 gaagcgggcc agcatcccca tcatggtgga cttgccaacg cctgaggcgg cgaagatccc
     2101 gagccgctgg ccctggcaga ccggcacaaa cacgtccagc
//
LOCUS       DATAVD010001940         3419 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1112628, whole genome shotgun sequence.
ACCESSION   DATAVD010001940 DATAVD010000000
VERSION     DATAVD010001940.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3419
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1112628"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..999
                     /locus_tag="VHX39_36965"
     CDS             <1..999
                     /locus_tag="VHX39_36965"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HEX3996795.1"
                     /translation="VDVSNPAKPRIRASLPLMNTLLGPPTNLQITPDGKLGLVANSVV
                     MNQDGTAWKTAPDNKLYVIDLNANPPKLADTVTVGAQPSGIAISNKGDLALTANRAGK
                     SVSVLSIQNGVVKSLGDVPMEQEAAAVVITPDGKRAFVCLNLVNKIAVLNIDGQKVTY
                     DKTLDIPSAFNPYNIDITPDGKYVVASNTGAKNNNADAEVIIEATGPHPHVVDIMSPG
                     IGPEGFAISPNGKWAATPLIEGSGAKDTDWFKTKGGELAVMSIGPGGKLTVTGKAPLG
                     KLPEGIAYSPNSDYIYVGNFVDKDLQVFRINNGKPAQVGPNIKLPGQPASMRGLAR"
     gene            1021..1944
                     /locus_tag="VHX39_36970"
     CDS             1021..1944
                     /locus_tag="VHX39_36970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEX3996796.1"
                     /translation="MKLAFFDNFKLGVVKGDAIHDVSAVVKDIPHVGPGDLISSLIAN
                     FANYRGKLEAAATGSGTPVASVRIRPPLPKPGNIVCMAVNYMEDGTLAKPAPINAFHK
                     ASTAIIGPNDTMVLPDVPATIFEGEAEMALVIGKRATNVAAADAMDYIFGYINFIDGS
                     ARGLPPAGNVFFQMKSRDTFAPIGPYLVTKDEITDPQKLPINLWVNGDLKQSFNTDDM
                     AHNIGRCIEWATSIHTLEPGDILATGTNHRGLSSFMDGDVVELETQGLGKLRFNIRDE
                     LKRTWSRETRLDRQKKNQEGPTSQIGGKYAK"
     gene            1963..2868
                     /locus_tag="VHX39_36975"
     CDS             1963..2868
                     /locus_tag="VHX39_36975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007436908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEX3996797.1"
                     /translation="MADPEIAKLRAVMAARPRATEIAQMRLDSDARGLAFGLAADVTV
                     QPVNANGVKAEWTSTPSADPANAILYLHGGGYVLCSLDSHRHLAAEVGRAAGARTLAI
                     DYRLAPEHPFPAPVEDAVAAYRYMLDSGLKPARIAFAGDSAGGGLVIAAILAIREAGL
                     PLPGCGWCISPWVDMQATGASFVDRAETDPTVQKATITMMAEWYLGGADPRHPHASPV
                     HGDLRGFPPLLIQVGSVETLLDDSIALARKAGTADVPVDLQIWPEMIHIWHLYFPVLS
                     AARRAIASGGLFVRNTLRPDITAPA"
     gene            complement(2772..>3419)
                     /locus_tag="VHX39_36980"
     CDS             complement(2772..>3419)
                     /locus_tag="VHX39_36980"
                     /inference="COORDINATES: protein motif:HMM:NF012593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HEX3996798.1"
                     /translation="SVYLVSALFVIIALGGALRLAGFRLWQVLGHFKEEILFVFAATS
                     AETMIPRSMEKLEALGCEKEVVGLVMPTGFSFNMDGTAIYMSMAVLFMAHATDTPLSF
                     VQQLGMLLVMLFTSKGAAGVTGGGFIALAATMPALGVLPVAALTLIVGVDRFMAEIRA
                     ATNLTSNIVATLVVGRWVDAIDPAYAGAVMSGRSVLRTNSPPDAIARRAADKTGK"
BASE COUNT          732 a         1151 c          983 g          553 t
ORIGIN      
        1 gtggatgttt ccaaccccgc caagccccgt atccgagcat cgctgccgct gatgaacacg
       61 ctgcttggtc cgcctaccaa cctacagatc acaccggacg gcaagctggg gctggtcgcc
      121 aactcggtgg tgatgaacca ggacggcacc gcctggaaaa ccgcgcccga caacaagctg
      181 tacgtgatcg atctgaatgc caacccgccg aaacttgccg acaccgtcac ggtcggcgcc
      241 caaccctccg gcatcgcgat ttccaacaag ggcgatctag cactcaccgc caatcgcgcc
      301 ggcaaaagcg tctccgtcct gtcgatccag aacggcgtcg tgaaatccct cggcgacgtc
      361 ccgatggagc aggaagccgc cgccgtggtc atcacccccg acggcaagcg agctttcgta
      421 tgcctcaacc ttgtgaacaa aatcgccgtc ctcaacatag acggccagaa ggtcacctac
      481 gacaaaacgc tggacatccc gtccgcgttc aatccttaca acatcgacat cactccggac
      541 ggcaaatacg tcgtcgcctc caacaccggg gccaagaata acaacgccga cgccgaggtg
      601 atcatcgaag cgaccggtcc ccatccgcat gtcgtcgaca tcatgtcccc cggcatcgga
      661 ccggaaggtt tcgccatctc ccccaacggc aaatgggccg cgacaccatt gatcgagggg
      721 tcgggggcga aggacacaga ctggttcaag accaagggcg gcgaactggc cgtgatgtcc
      781 atcggacccg gcggcaagct gaccgtcacc ggcaaggcgc cactgggcaa actacccgag
      841 ggcatcgcct acagtccaaa tagcgactat atctacgtcg gtaacttcgt ggacaaggac
      901 ctgcaggtgt tccggataaa caacggaaaa ccggcccagg tcggaccaaa catcaaactg
      961 cccggccaac ccgcctcgat gcgaggattg gctcggtaac aacatacagg agagaccatc
     1021 atgaagctgg cattcttcga taacttcaag ctgggcgtcg tcaagggcga tgcgatccac
     1081 gacgtctccg ccgtggtcaa ggacatcccg cacgtgggcc ccggcgacct gatcagcagc
     1141 ctgatcgcta atttcgccaa ctatcgcggc aagctggaag ccgccgcgac tggttccggc
     1201 acgccggtgg ccagcgttcg catccgcccg ccattgccca agccgggcaa tatcgtctgc
     1261 atggcggtga actacatgga agacggcaca ctggcgaaac ccgcgccgat caacgccttc
     1321 cacaaggcct ccacggccat catcggaccg aacgatacga tggtgctacc cgatgtcccc
     1381 gcgacgattt ttgaaggcga agccgaaatg gccctcgtca tcggcaagcg cgcgaccaac
     1441 gtggccgcgg ccgatgccat ggactacatt ttcggttaca tcaacttcat cgatgggtcc
     1501 gcgcgcggcc tgccacctgc cggcaacgtg ttcttccaga tgaaatcacg cgataccttc
     1561 gcccccattg gcccgtatct ggtgaccaag gacgaaatca ccgatccgca gaaactgccg
     1621 atcaacctgt gggtgaacgg tgacctgaag cagtccttca acaccgatga catggcgcac
     1681 aacatcggcc gctgtatcga atgggcaacg tcgatccaca cgctggaacc cggcgacatc
     1741 ctcgccaccg gcaccaacca tcgcggcctg tccagcttca tggatggcga tgtggtcgaa
     1801 cttgaaaccc agggcctcgg caagctgcgc ttcaacatcc gcgacgagct gaaacgcaca
     1861 tggtcacgcg aaacccggct ggaccggcag aagaagaacc aggaaggtcc gacctcgcaa
     1921 atcggcggca aatacgcaaa gtaacaaacg aaaggaccga tcatggccga ccccgaaatc
     1981 gccaaactcc gagcggtcat ggccgctcgg cccagggcaa cggaaatcgc gcagatgcgt
     2041 ctcgactccg atgcgcgcgg gttggccttc ggtctggccg ccgacgtgac cgtgcagccg
     2101 gtcaacgcca acggtgtcaa agcggaatgg acctcgacac cgagcgccga tcccgccaac
     2161 gcaatcctgt atctgcatgg cggcggctac gtgctctgct cgctggacag ccaccgtcat
     2221 ctggcggcgg aggtcggtcg agccgccggt gcccggaccc tggcgatcga ctaccgcctg
     2281 gcgccggagc acccattccc cgcgccggtg gaagacgctg tggccgccta tcgctacatg
     2341 ttggacagtg ggctgaagcc ggcgcgcatc gcgttcgccg gcgacagtgc cggtggcggc
     2401 ctggtgatcg ccgcgatact ggctatccgg gaagccggcc tgccgctgcc aggatgcggc
     2461 tggtgcatct ccccctgggt ggacatgcag gcgacaggcg cgtccttcgt cgatcgcgcc
     2521 gaaactgacc cgacggtgca gaaagccacc attacgatga tggcggaatg gtatctgggc
     2581 ggcgccgatc cgcgccatcc gcatgcttca ccggttcatg gcgatctacg tgggtttccg
     2641 ccgttgctga tccaggtcgg atcagttgaa accttgctgg acgattccat cgccctcgcg
     2701 cgcaaggccg gcacggcgga tgttccggtc gatctgcaga tatggcccga gatgatccac
     2761 atctggcacc tctatttccc ggttttgtcg gccgcgcgcc gggcgatcgc gtccggcgga
     2821 ctgttcgtgc gcaacacgct gcggccggac atcaccgcgc cggcataggc gggatcgatc
     2881 gcgtccaccc agcgtccaac caccagcgtc gccacgatgt tgctggtcag gttggtcgcg
     2941 gcgcggattt cggccatgaa acgatcgact ccgacgatca gggtcaacgc cgccaccggt
     3001 agcaccccca gcgccggcat cgtcgccgcc agcgcaatga agccaccgcc ggtcaccccc
     3061 gctgcgcctt tcgacgtgaa cagcatcacc agcagcatgc caagctgttg aacgaaggaa
     3121 agcggtgtgt ccgtcgcgtg cgccatgaac agcaccgcca tgctcatgta gatcgccgtg
     3181 ccatccatgt tgaaggagaa gccggtcggc atcaccaggc cgacgacctc cttttcgcag
     3241 cccagcgctt cgagtttctc cattgaccgg ggaatcatcg tctcggccga ggtggcggcg
     3301 aagacgaaca ggatctcttc cttgaaatgc cccagcacct gccaaagccg aaacccggcc
     3361 aggcgaagcg cgccgccaag cgcaatgatc acgaacagtg cgctgaccag atagaccga
//
LOCUS       DATAVD010001941         4185 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1482751, whole genome shotgun sequence.
ACCESSION   DATAVD010001941 DATAVD010000000
VERSION     DATAVD010001941.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4185
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1482751"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..197
                     /locus_tag="VHX39_36985"
     tRNA            124..197
                     /locus_tag="VHX39_36985"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:156..158,aa:Asn,seq:gtt)
     gene            complement(386..1294)
                     /locus_tag="VHX39_36990"
     CDS             complement(386..1294)
                     /locus_tag="VHX39_36990"
                     /EC_number="2.4.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007438992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017061 - S-methyl-5-thioadenosine
                     phosphorylase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5'-thioadenosine phosphorylase"
                     /protein_id="HEX3996799.1"
                     /translation="MTDGPPPIEPVIEPVIGIIGGSGLYDIDGLEDKAWKRVATPWGE
                     PSDELLFGRLGGVQCVFLPRHGRGHPVSPTHLNYRANIDALKRSGVTDVLSLSAVGSF
                     RNELPPGHFVIVDQFIDRSFAREKSFFGDGIVAHVSMAHPVCGRLGHAIHTAARSLSL
                     PVTRGGTYLVMEGPQFSTKAESELYRAWGCHVIGMTNMPEAKLAREAELCYATVAMVT
                     DFDCWHPDHDHVTVEAVVKVLFDNADKARTLVKALVPTIGGTRAGCSQGCDRALDHAI
                     ITAPSVRSAALAEKLDAVAGRVLSLG"
     gene            complement(1322..2101)
                     /locus_tag="VHX39_36995"
     CDS             complement(1322..2101)
                     /locus_tag="VHX39_36995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007003317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HEX3996800.1"
                     /translation="MRPFRSLFAPLLAVGVMAGGLLALPAAAQDETPSAPSQTWSFGG
                     LFGTPDIRSAQRGFQVYSEVCSNCHSMHQMHYRDLSALGFTEAEVTAIASTFTVPQGT
                     DDSGQPKEGPATPADQFRSPFPNDKAARAALNGALPPDLSLIINARPDGANYVYGILT
                     GYAQPPAGFTMGEGMNYDAYFPGHQIAMPQPLTDGRVTFTDGTPDTLSQEARDVVTFL
                     YWTANPETAERKAMGIRIILFLILLTGVTYAVKRKIWSDVH"
     gene            complement(2101..3363)
                     /locus_tag="VHX39_37000"
     CDS             complement(2101..3363)
                     /locus_tag="VHX39_37000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b N-terminal domain-containing
                     protein"
                     /protein_id="HEX3996801.1"
                     /translation="MAGLHKSDLENPVLNWIDSRLPFITMMQKEYGVFPTPRNFNYFW
                     NFGALAMVTLAIMILTGIFLAMNYQPNTGLAFDSVQHIMRDVNYGWLIRYVHQNGASM
                     FFVVTYVHIFRGIYYGSYKAPRELLWMLCVVILLLMMATAFMGYVLPWGQMSYWGATV
                     ITNLFSAFPVIGPKIVTLLWGGFSVDQPTLNRFFSLHYLLPFVIVGVVFLHVAALHIV
                     GSNNPLGIEPQGPQDTVPFHPYYTSKDSVGVCVFLIVWAAFVFFAPNVLGDPNNFIPA
                     NPLQTPADIVPEWYFLPYYAILRSVPNKLLGVCFMFGSLLVLFVLPWLDTSRVRSTRF
                     RPTYRWFLWVWILSFIVLGICGHNKPEGIWVILSRISAFYYFAFFLVITPILGKLERP
                     LPRPESITQAVTGRPIEAVITGHPLESH"
     gene            complement(3409..3969)
                     /gene="petA"
                     /locus_tag="VHX39_37005"
     CDS             complement(3409..3969)
                     /gene="petA"
                     /locus_tag="VHX39_37005"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEX3996802.1"
                     /translation="MALSPAATADGHPADETKRDLLELIAGAGAVILGGGIAVALVDS
                     MNPSKDVLAVSSVEIDLSPIAVGSGITAMWQGKPIFIRHRTPQEITAAQDANLGDMRD
                     PQTDQSRVKSGHSQWIVLIGICTHLGCIPLGNKPTDMRGEWGGWFCPCHGSQYDTSGR
                     IRKGPAPLDLALPPYAFETDTKIKIG"
BASE COUNT          830 a         1280 c         1324 g          751 t
ORIGIN      
        1 cttggcgtgt tgccgactcg cgccaggggc gaggacgaga aaggccgctt cccaacgccc
       61 taggaaagtg acgggaagcg gcccggatag tcggcactcg aaagtgccat ttcgaccggt
      121 aaggcgagca tcgttcaacg gtaggacgcg gagctgttac ctccgagacc agagttcgac
      181 cctctgtgtt cgccccatgg tctttctgtg tataacgcag tttcggtgaa gccgccaggc
      241 cttaccgaac agattttcgt gtcttgacag acaggcatga agacggctcg gtcggtcact
      301 atctatgtgc atcggtgtta caccgaggtg tcccggcgca tgtataccga tcggacacag
      361 gccgcgtcac gcactctgat ggggctcagc ccaacgacag gacccggccg gcaaccgcgt
      421 ccagtttctc cgccagcgcg gccgaccgca ccgacggcgc cgtgatgatc gcgtggtcca
      481 gcgcgcggtc gcatccctgc gaacaccccg ctcgcgtgcc gccgatcgtc ggcaccagag
      541 cctttaccaa tgtcctggcc ttgtcggcgt tgtcgaacaa aaccttcacc accgcttcca
      601 ccgtgacgtg gtcgtggtcc gggtgccagc agtcgaagtc ggtaaccatg gccacggtcg
      661 cgtagcaaag ctccgcctcg cgggcgagtt tggcttccgg catgttggtc atgccgatta
      721 cgtggcaacc ccaggcgcga tacagctcgc tctcggcttt ggtggagaac tgcggccctt
      781 ccatcaccag gtaagtgccg ccgcgtgtca ccggcagcga cagcgagcgt gccgccgtat
      841 ggatggcatg ccccaatcgg ccgcacaccg gatgcgccat cgagacgtgc gcgacgatgc
      901 catcgccaaa gaaactcttc tcccgcgcga aggagcggtc gatgaactga tccacaatga
      961 cgaaatggcc gggcggcagt tcgttccgaa aactaccgac cgccgacagc gacagcacgt
     1021 cggtcacccc cgaccgtttc agcgcatcga tgttcgcccg ataattgagg tgggtgggtg
     1081 agacagggtg gcctcgcccg tgtctgggca ggaacacgca ctgcaccccg ccgagacggc
     1141 caaacagcag ttcatccgat ggctcgcccc agggggtcgc gacccgtttc caggccttgt
     1201 cctccagccc atcgatgtca tacagcccgg agccgccgat gatgccaatc accggctcga
     1261 tgacaggctc gatcggggga gggccatcgg tcatgacgga aggccggtgc ggatgcccag
     1321 gtcagtgcac atccgaccag atcttgcgct tcacggcata ggtcacgccg gtcaacagga
     1381 tcaggaacag gatgatgcgg atgcccatcg ccttacgctc ggcggtctcc ggattcgcgg
     1441 tccagtacag gaacgtcacc acgtctcgcg cctcctgact gagtgtgtcc ggggtgccat
     1501 cggtgaaggt gactctgccg tcggtcagcg gttgcggcat ggcgatctga tgacccggga
     1561 aatacgcatc atagttcatg ccctccccca tggtgaaacc cgcaggcggt tgggcgtagc
     1621 cggtcaggat gccgtagaca taattcgcgc cgtccgggcg cgcgttgatg atcagcgaca
     1681 gatcgggcgg cagcgcgccg ttcaacgcgg cgcgggcggc tttgtcgttc gggaacggcg
     1741 agcggaattg atcggccggc gtcgccggtc cctccttcgg ttgtccgctg tcgtcagtgc
     1801 cctgcgggac cgtgaaggtg gacgcgattg cggtcacctc cgcctcggta aagcccagtg
     1861 cggagaggtc gcggtagtgc atctggtgca tggaatggca gttggagcag acctcggaat
     1921 agacctggaa cccacgctgt gccgacctga tgtccggggt gccgaagagc ccgccaaaac
     1981 tccaggtctg gctcggtgct gatggcgtct catcctgggc cgccgccggc agtgcgagta
     2041 atccgccggc catcacaccg acagccagca gaggagcgaa caaggaacgg aacgggcgca
     2101 tcagtggctc tccagcgggt ggccggtgat aaccgcctcg atcgggcggc cggtgaccgc
     2161 ctgagtgatg ctctcgggcc gcggcagcgg acgttccagc ttaccgagga tgggcgtgat
     2221 caccaggaag aatgcgaagt aataaaaggc cgagatccgg ctcaggatga cccagatgcc
     2281 ttccggcttg ttgtgcccgc agatgccgag gacgatgaag gacaggatcc agacccagag
     2341 gaaccagcga taggttggcc ggaaccgcgt gctgcgcacc cgcgaagtgt cgagccaggg
     2401 cagcacgaac agcaccagca gcgagccgaa catgaagcag acgccaagca gcttgttcgg
     2461 caccgagcgc aagatggcgt agtacggcag gaagtaccat tccggaacga tgtcggcagg
     2521 cgtttgcagc ggattggccg ggatgaagtt gttcggatcg ccaagcacgt tcggcgcgaa
     2581 gaacacgaaa gccgcccaca cgatcaggaa cacgcagacg cccacgctgt ccttggacgt
     2641 gtagtacggg tggaacggca ccgtgtcctg cggtccctgc ggctcgatgc ccagaggatt
     2701 gttggacccg acgatgtgca gtgccgcaac atgcaggaac accacgccga cgatgacgaa
     2761 cggcagcagg taatgcagcg agaagaaccg gttgagcgtt ggctgatcga cgctgaaccc
     2821 gccccacagc aaggtcacga tcttcggccc gatcaccggg aaggcggaga acaggttggt
     2881 gatgacggtg gcgccccagt acgacatctg gccccacggc aacacgtagc ccatgaacgc
     2941 ggtggccatc atcaacaaca ggatcaccac gcacaacatc cacagcagct cgcgcggcgc
     3001 cttataggat ccgtagtata tgcctcggaa aatgtggaca taggtgacca cgaagaacat
     3061 cgacgcgcca ttctggtgga catagcgaat gagccagccg tagttcacgt cgcgcatgat
     3121 gtgctgcacg ctatcgaatg cgaggccggt attcggctga taattcattg ccaggaaaat
     3181 gccggtcagg atcatgatgg ccagcgtgac catggcgagc gcgccgaaat tccagaagta
     3241 attgaagttc ctcggcgtcg ggaagacgcc gtattccttc tgcatcatcg tgatgaaagg
     3301 cagtcgggag tcgatccagt tcagcaccgg attttcgaga tcgcttttat gcagaccggc
     3361 catgacggtt tccctgatgg gtcttggctt ggaacgaggg cgctcggttc agccgatttt
     3421 gattttggtg tcggtttcga aggcatacgg cggcaacgcc agatccagcg gcgccgggcc
     3481 tttacgaatg cgtcccgagg tatcgtactg actgccgtga cacgggcaga accaaccgcc
     3541 ccattcgccg cgcatgtctg tgggtttgtt gccaagcggg atgcagccga gatgggtaca
     3601 aatgccgatc agcacgatcc attgcgagtg gccggatttg accctcgact gatcggtctg
     3661 cgggtcgcgc atatcgccaa gattggcgtc ctgcgctgcg gtgatttcct gtggcgtgcg
     3721 atggcggatg aagatcggct tgccctgcca catggcggtg atgccggagc ccacagcgat
     3781 cggcgacaaa tcgatttcca ccgaggacac tgccagcacg tccttcgacg ggttcatcga
     3841 atcgaccaag gccacggcta tgccgccgcc aaggatcacg gcgcctgcgc cggcgatcag
     3901 ttcaagcagg tcgcgtttgg tttcatcggc cgggtggcca tcggcagttg cggcgggcga
     3961 tagagccata ttcccctcgt attccccggt cggtgcgacc gtaatttcat ccacgttggc
     4021 cggccatctc gcgccggtct ggtcccctgg cctttacgcc ctggccttta cgccctggcc
     4081 attacgcatg actgaccacg gaccgcccgg cctggacggt ccgttcagag cgagcgcaag
     4141 ttagaggcgc ctttcatccc ccgcaacacc gcccatggtg ggtcc
//
LOCUS       DATAVD010001942         2207 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1112808, whole genome shotgun sequence.
ACCESSION   DATAVD010001942 DATAVD010000000
VERSION     DATAVD010001942.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1112808"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..721)
                     /locus_tag="VHX39_37010"
     CDS             complement(<1..721)
                     /locus_tag="VHX39_37010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996803.1"
                     /translation="MSSPGEHAAPVTAAIHKRIHQVGAIGLFLILAAYTLSTLDDLEL
                     QRTILGTVALAFGAAYLLFSFREKLVLAVPPACLLLMAAFGTAQTLWAPTKIVNFGWF
                     TTLYWLVAGVVALIAVQVFQSRSVARHFRTAFAVFGGLVCLLELLEQGSHTSKYYWIF
                     QSRWAEIFGSFGYHNNFAAFIELSLPITLWLGLIHRKPNYLFLLLGGMQVGSVAACGS
                     RAGLLLVVLEVLTVLPIAYMKN"
     gene            complement(759..2183)
                     /locus_tag="VHX39_37015"
     CDS             complement(759..2183)
                     /locus_tag="VHX39_37015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HEX3996804.1"
                     /translation="MGKITGFLEYERETPERRPTRERVNDWFEVYQDFSTDAVEKQAA
                     RCMDCGVPFCHTGCPVNNLIPEWNDLVWKGRWRDALRTLHATNNFPEFTGRICPAPCE
                     AACVLGINAPSVTIKVVEQNIIDRAFQEGWVLPERPARRTGKKVAIIGSGPAGLAAAQ
                     QLNRAGHFVTVFEKEDRIGGLLRYGIPDFKLEKIVVERRLEQLRAEGIEFRSGVHVGV
                     DLKGADLLRQHDAVLLAVGAEQPRGLGIPGSELNGIHYAMDYLTQQNKRRAGDRFPAD
                     DEILATGKRVIIIGGGDTGADCLGTAHRQKAASVHQLQIHPMPPEDRHPNTPWPLWPL
                     QLRIEAAHEEGGVREWSVLSTHFSGDDEGNVRKLHCVRVGPKPQLERVPDSEFYLDAD
                     LVLIAIGFSGPRRTGLLEQLPVAYDHRGNIQVDDAFMTTAPGVFAAGDSRRGQSLVVW
                     AIAEGRKAAHHMDRFLMGSSDLPL"
BASE COUNT          476 a          647 c          665 g          419 t
ORIGIN      
        1 ggttcttcat gtaggcgatg ggcaggacag tgagaacttc aagcaccacc agcagcaggc
       61 ctgctctcga tccacatgct gcgacggagc ccacctgcat gccgccaaga agcagaaaaa
      121 ggtaattcgg cttccgatga atgagcccca gccacaacgt aatcgggagc gacaattcga
      181 tgaacgcggc gaagttattg tggtagccga aggacccgaa aatctcggcc catcggcttt
      241 gaaagatcca gtagtacttg ctcgtgtgcg agccctgctc gagtagttcc agcagacaaa
      301 cgagaccgcc aaacaccgcg aatgcagtcc gaaaatggcg ggcgacagat cgagattgga
      361 agacctgcac cgcgattaat gcgaccactc cggcgaccag ccagtagagc gttgtgaacc
      421 atccgaagtt aacaattttc gtcggcgccc acagcgtttg cgcggtcccg aacgcagcca
      481 tcagcagcag gcatgcgggc ggcacggcca gaactaactt ttcccggaag gagaacaaca
      541 gataagctgc tccgaaggcg agagccaccg tgcccaggat ggtccgctgc aattcgagat
      601 cgtcaagcgt tgagagcgtg taagcggcca agatgagaaa taaaccgatg gctccaacct
      661 gatggattcg tttatgaatt gcggcagtaa cgggcgcggc atgctcgccg ggagaggaca
      721 tcttgactgc tactttatcc tagcgtgcaa cttgccattc aaagcggcag atcactcgat
      781 cccattaaga agcggtccat atgatgggca gctttgcggc cttcggcgat tgcccagact
      841 accaatgatt ggccgcgacg cgagtcgccc gcggcgaaaa cgcccggcgc ggtagtcatg
      901 aaggcatcgt ccacctgaat gttcccacgg tggtcatagg caacgggcaa ctgttccagc
      961 agcccggtgc ggcgcggacc ggagaagcct atcgcaatga gaacaaggtc ggcatcgaga
     1021 tagaactcac tgtcgggcac tcgttcgagc tggggtttcg gtccgacgcg tacgcagtgc
     1081 agtttgcgca cgttgccttc gtcgtcgccg ctgaaatggg tgctaagaac gctccactcc
     1141 cggacgccgc cctcttcgtg cgccgcttca atgcgcaact gcaagggcca tagcggccaa
     1201 ggcgtattgg gatgccggtc ttcgggaggc atgggatgga tttggagctg gtgaacggaa
     1261 gcggccttct gccggtgcgc ggtgcccagg caatcggcgc ccgtatcgcc gccgccgatg
     1321 atgattacgc gtttacctgt tgccagaatt tcgtcgtcgg cgggaaagcg atcgccggca
     1381 cggcgtttat tctgctgtgt caggtagtcc attgcgtagt gaatgccgtt cagttcactg
     1441 cccgggattc cgaggccgcg aggttgctcc gcgccgacgg cgagcagcac ggcatcgtgc
     1501 tgtcgcagca agtcggcccc tttcaaatcg acgcccacgt gcacgccgga acggaactca
     1561 atgccttcgg cgcgcagttg ttcgagccga cgctccacca cgattttctc gagcttgaaa
     1621 tccggaatgc catagcgcag cagtccgccg atccgatctt ccttttcaaa gacagtgacg
     1681 aaatggccgg ctcggttgag ctgctgcgcc gcggcgaggc cggcaggacc cgagccaatg
     1741 atcgccactt tcttgcctgt gcggcgagcg ggacgttccg gcaaaaccca gccttcctga
     1801 aaggcgcgat cgataatgtt ctgctcaacc actttgatgg tgaccgacgg ggcgttgatg
     1861 cccaacacgc aagcagcttc gcagggcgcg ggacagatgc gccccgtaaa ttcggggaag
     1921 ttgttggtgg cgtgcagagt gcgcaacgca tcacgccaac ggcccttcca cacgaggtcg
     1981 ttccactccg gtatcaggtt gttgacggga cagccggtgt ggcagaacgg cacgccgcaa
     2041 tccatgcaac gagcggcctg cttctcgacg gcatcggtcg agaaatcctg gtagacttca
     2101 aaccaatcgt tcacccgctc gcgcgtgggg cggcgctcgg gggtttcgcg ctcgtattca
     2161 agaaatccag tgatcttccc catgaaggct atcgagctcc ttcacgg
//
LOCUS       DATAVD010001943         4141 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2045572, whole genome shotgun sequence.
ACCESSION   DATAVD010001943 DATAVD010000000
VERSION     DATAVD010001943.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 4141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4141
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2045572"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            221..1858
                     /gene="ggt"
                     /locus_tag="VHX39_37020"
     CDS             221..1858
                     /gene="ggt"
                     /locus_tag="VHX39_37020"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007002921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEX3996805.1"
                     /translation="MARRGMVVTNHPLASAAAAEMLAAGGNAIDAAIAAFFTLSVVEP
                     MMVGILGGGMAHIRLADGNHVVIDGQSTAPLGTGPTTYRPDPKAGPGSMDTIGRKNAL
                     GPTAVATPGNLMGWCEALERFGTFSRADVMEPAIRHASRGFRVTPYLQECVTDCAADL
                     ALDPEIARLYLPGGAPIPAGTRLVTGDYAEVLRDIVQQGPSILYTGSLGRHYVDHMEE
                     AGGYLSQQDLARYRTVTREAIRGLYRGFEITGPPPPSSGPLHIIQMLNILEGYNLAAL
                     GFGSPDTLHLMAEALKIAFADRTAASADPAFVKVPVEKLLDKAYAADRRSRIDLHKAQ
                     AWSAEVAPGSDGGSHTTHLTIADGMGNIVASTQTINGLFGARYIVPGTGLIPNNYMFV
                     FDPHPGRVNSIAPGKRITSSMSPVIVLRDGKPMYALGLPGGLRIFPSVMQALCNLIDH
                     GMTVQEAVEAPRIWTQGDVLELEAGFPSGVFQALADRGHTLAKVGNVAGGMSAIHFGD
                     DGMMQGAACWRADGTPIGVGGGLARSGVRFRPEATRA"
     gene            2143..3441
                     /locus_tag="VHX39_37025"
     CDS             2143..3441
                     /locus_tag="VHX39_37025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996806.1"
                     /translation="MRRLGRTDIVVACSVGVVSGLVYGWFAILLSQSHYANVDDLAFD
                     FDARLYLCTYADSPMAMGGIKHPLIILLRPPVQALIYLGLAPRAAAGVWMAAPGGTGV
                     ALSYLFLRTISVAHVIAIPFALLFSVSATQLFVAMIPEAYGPAGTVLVGLWLLTVLRL
                     NAPTTMGVWRYVVAFATFGITITNVAQSFIAEFLIWLRNDTIRGAIRRTIVFGIRFVA
                     LLALPLLIIWHSFVWQVIVHPIHFLKSAWWLQTFGEKAGLRPILMTFLEYSTVAPDYV
                     WVPIADGWDMRDFRAPLWSPIGFAAVAGWSMLLVSGIVCGLRDSGMRWLTIGLLAAFA
                     SNVLLHTRFQFRLSLFIYTSHVLILVFGMAAGAARIASRRSGAATTMGVAMLLLFMLV
                     GTNNLPIAAAFARDFRSAVIPGPPDCADYASGRHSPDGQQ"
     gene            3438..>4141
                     /locus_tag="VHX39_37030"
     CDS             3438..>4141
                     /locus_tag="VHX39_37030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996807.1"
                     /translation="MNPSSNFAALTEDITQRFIRVPFLLYGTLLFSVGIVIYLFGVVL
                     VILRRLFGLNELLMPINEWIVWYSGMPTFFGAAMALFDILVLLRCKRQSGGLRIEPIS
                     DRHVTVALTAYDDELSITDAVRDFVAHPLVRRVLVVSNNSRDATMERAHAAGGVTFNE
                     LNSGYGHCVFRCLKEAARFDDTELVVLCEGDKTFSAVDIDKLLSYVAHADIVNGTRTV
                     ERLRQNKTQLSTFMYYG"
BASE COUNT          724 a         1221 c         1263 g          933 t
ORIGIN      
        1 gggtgcggca aggcgatctg ccagggcgaa gtctattggg tttgccgtta ttctccggcc
       61 ggcaattacg acaccgagtt tcgcgagaac gtctcgccaa tatgccgatg acccctgggc
      121 gggaggatgc tgcctggctc cctctttgag gcgctcaatg acgcagtcca actggcggtc
      181 ccgcgcaggc acgaccttcg aatgcgaaaa gcagcctgcc atggccaggc gcggcatggt
      241 ggtcaccaac cacccgctcg cctcggccgc ggcggcggag atgcttgccg ccggcgggaa
      301 tgcgatcgac gccgccatcg ccgcgttttt cacgctctcg gttgtcgagc cgatgatggt
      361 cggcattctg ggcggcggca tggcccacat ccgtctcgcc gatggaaatc acgtcgtaat
      421 cgacggccag agcacggccc cacttggcac cggtccgacg acctatcgac cagatcccaa
      481 ggccggtcca ggaagcatgg acaccatcgg gcgcaagaac gcactggggc caaccgcagt
      541 cgccacaccc ggcaacctga tgggctggtg cgaggccctg gaacgcttcg gaacgttttc
      601 ccgcgccgat gtgatggagc ccgcaatccg tcatgcctcg cgtggcttcc gcgtcacgcc
      661 atacctgcag gaatgcgtca cggattgcgc cgccgatctc gcactcgatc ccgagatcgc
      721 ccgactgtat ctgccaggcg gcgcgcccat tcctgcgggc acaagattgg tgaccggaga
      781 ttatgccgaa gtattgcgcg atatcgtcca gcaggggccg tccatcctct acaccggctc
      841 gcttggccgc cattacgtgg atcacatgga ggaggccggc ggctacctct cgcaacagga
      901 cctggcccgc tatcgcaccg tcacgcggga ggcgatcaga ggcctctatc gcgggtttga
      961 gatcaccggg ccgccgccgc catcgtccgg tccgctgcat atcatccaaa tgcttaacat
     1021 cctggagggc tacaatctcg cagcgctcgg ttttggctcc ccggacacgc tgcacctgat
     1081 ggccgaggcg ctgaagatcg ccttcgccga tcgcaccgct gcgtccgccg atcctgcgtt
     1141 tgtcaaagtt ccggtggaga agttgctgga caaagcctat gcggccgatc ggcgcagccg
     1201 gatcgatttg cacaaagctc aggcgtggag cgccgaggtg gcgccgggat cggatggcgg
     1261 atcacatacg acgcatctga cgatcgcgga cggaatgggc aacattgtcg ccagcaccca
     1321 gaccatcaac ggtttgtttg gggcacgtta catcgtcccc ggcaccgggt tgatcccgaa
     1381 caattatatg ttcgtgttcg acccgcaccc tggacgggtc aactcgatcg ctccgggtaa
     1441 gcggatcacg tcatcaatgt ccccggtcat cgtgctgcgt gacggcaagc cgatgtacgc
     1501 tctcggattg cccggcgggc tgcggatttt tccctccgtc atgcaggcgc tgtgcaattt
     1561 gatcgatcat ggaatgaccg ttcaggaggc tgtcgaagcg ccgcgcatct ggactcaggg
     1621 cgatgtgctg gaactcgagg ccgggttccc atccggagta ttccaggccc tggcagatcg
     1681 cggccacacc ctcgccaagg taggcaacgt ggccggtggg atgagtgcca ttcatttcgg
     1741 tgatgacggt atgatgcaag gcgccgcctg ctggcgtgcc gacggaacac cgataggggt
     1801 cggcggcggg ctggcccgtt ccggggtgcg cttccgcccg gaagccacgc gggcgtgaaa
     1861 ccgtgacgtt accgagacag aattacccca accggccaac gacgacgggt gcacggcgcc
     1921 ttcttttgcc ttggatcaat taacgggaag tcacaacctc gcttaacgga tttgtttgca
     1981 gtcgggtcaa tggtcgcgaa agtgcctggg gtccggccgc agttggcgtg gcaggaccat
     2041 acttcgctgg agtcagccgt cgaactcttt ccggtccgtt gcgctgaatt ttggaaatga
     2101 atgatggtca cgcacgctcg atcgcccgga aaagctcgga ccatgagacg attgggacgc
     2161 accgacatcg tcgtcgcctg ttctgttggt gttgtcagtg ggctggtcta cggctggttc
     2221 gcaattctgc tatcgcaaag tcattacgcc aatgtcgatg atcttgcttt tgatttcgat
     2281 gcgcggctgt atctctgcac ctatgctgat tcgcctatgg cgatgggcgg gatcaagcat
     2341 ccactgatta tattgttgcg gccgccggtg caggcgctaa tttatctcgg cctcgcgccg
     2401 cgagcggcag ccggagtatg gatggcggcg cctggcggaa ccggcgtggc cctgtcgtac
     2461 ttgtttcttc gcacgatttc ggtcgcgcac gtcatcgcga tcccgttcgc tctgttgttc
     2521 tcggtttccg ccacgcagtt gttcgtcgcg atgatccccg aggcgtacgg gccggctggc
     2581 acggtgctgg ttggactctg gctgctgacg gtattgcggc tcaatgcgcc gacaaccatg
     2641 ggagtctggc gttatgtcgt ggcctttgcg acgtttggca taaccatcac caacgtcgcg
     2701 cagtcattca tcgcagagtt tctgatctgg ctccgcaatg acacaatacg tggcgcaatt
     2761 cgccggacga tcgtcttcgg cattcgtttc gtggcgctgc tcgcgctgcc gctactgatc
     2821 atttggcatt ccttcgtgtg gcaggtgatc gtccatccga ttcacttcct gaagtctgcc
     2881 tggtggttgc agacctttgg ggaaaaagcc ggactgagac ccattctaat gacgttcctc
     2941 gaatactcga cggtcgcgcc ggactatgtc tgggtaccca tcgccgatgg ttgggacatg
     3001 cgggattttc gcgcaccgct ctggtccccg attgggtttg ccgcggttgc cggatggtcg
     3061 atgttgctgg tctccggcat tgtctgtggt ctgcgcgata gcggcatgcg gtggctgacc
     3121 attggactcc tcgcggcgtt tgcgtccaac gtcctgttgc acaccagatt tcagttccgc
     3181 ctgagtctat tcatttatac gtcgcacgtg ctcattctgg tgtttgggat ggctgccggc
     3241 gccgcccgga ttgcgtcccg ccgtagcggc gcggcgacga caatgggagt ggcgatgttg
     3301 ttgctgttca tgttggttgg gacaaacaat ttaccaattg ccgcggcctt tgcgcgtgat
     3361 ttccgctctg cggtcattcc ggggccgccg gattgcgccg attacgcgtc aggtcgtcat
     3421 agcccggatg gacagcaatg aacccctcat caaacttcgc ggccctgacc gaggatatca
     3481 cgcagcgttt cattcgcgta ccattcctgc tttatggcac cttgctgttc tcggttggga
     3541 ttgtgattta tctgtttggt gtcgtactgg tcatactccg ccgtttgttc ggactgaacg
     3601 aactgctcat gccgatcaac gaatggatcg tatggtacag cgggatgccc accttctttg
     3661 gtgcagccat ggccttgttc gacatcctgg tgttgctcag atgcaaacgg cagtccggtg
     3721 gtctgcgcat cgagccgatc tcggacaggc acgtgactgt ggctttgaca gcttatgatg
     3781 atgaactaag catcaccgac gccgtgcggg atttcgtggc tcatccgttg gttcgccgtg
     3841 ttctggtcgt cagcaataac agccgcgatg cgacaatgga acgcgcgcat gccgcaggtg
     3901 gagttacctt caatgagttg aactcgggat atgggcattg tgtatttcgg tgtctgaagg
     3961 aagcggcacg gtttgacgat accgagcttg tggttctctg cgagggcgac aaaaccttca
     4021 gcgccgttga tatcgacaag ctgctttcct atgtcgctca cgccgatatc gtcaatggca
     4081 cgcgcactgt cgagcgactg aggcagaaca agacccagct cagcaccttc atgtattacg
     4141 g
//
LOCUS       DATAVD010001944         1996 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_556226, whole genome shotgun sequence.
ACCESSION   DATAVD010001944 DATAVD010000000
VERSION     DATAVD010001944.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_556226"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..415)
                     /locus_tag="VHX39_37035"
     CDS             complement(<1..415)
                     /locus_tag="VHX39_37035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="with UgpACE is involved in the uptake of
                     glycerol-3-phosphate; Derived by automated computational
                     analysis using gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     substrate-binding protein"
                     /protein_id="HEX3996808.1"
                     /translation="MDQALTADLRLRLRRRSVLAAAPAALAMARPTRAAERTEITVWH
                     AMGSAPGEEFAKLIDRFNAGQGRVQVSGLYKGAYKELMVVMASAWRAGEAPHAAQIFE
                     VGTETMLRSGPVIKPVWQLARDTGVTLDPEAYIPSV"
     gene            complement(400..>1996)
                     /locus_tag="VHX39_37040"
     CDS             complement(400..>1996)
                     /locus_tag="VHX39_37040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996809.1"
                     /translation="NVSVGFPQGKSGDKPMPLDLATLRNDKAFDALTAAILERDQPRT
                     TDLFYKMVTDEGRSVGEALSVVTAAEAPFVQVPNHINVKDGQVVLVNNDHTILGLRTS
                     ADLAPYLPEQYRLLPMLQSVWYIPAGLDIWNQLLGKYPGRYATMKGMNVPPPEYGPVV
                     WNQDVAPIREGGTLDERLNAHMLATMGGQVERSYGMFLDLAADETARDRLRDQLLFLG
                     LIDVQDTIVGRKARNTGHKALRARAIVGLADHVGWERAHGVFYTGVPDMAVGPLYYSL
                     YDYVCVQLTNAFPDLGKSLVQSNQTPLSAGEVEAFVDMLMTGDQATVFGQLTEHLKNG
                     ISIRSLGDTIQLAAGELILRNTVPRAFTDGQHPFDYCNTGNYWFRSSNSPYQPRILYM
                     MANFVNDSARANKWSKSVIESEIAGYDFANRDPDGLLRELDEAILAFDIARSTAVAHA
                     YLQSGADRSKYMATVALVASKFQDDPHNQKITHSAFQEYEHNSTHLRDRLLLVAVRQL
                     AGWPKMPGERDCYARFMKEWIRH"
BASE COUNT          367 a          615 c          628 g          386 t
ORIGIN      
        1 gcaccgacgg aatatacgcc tccggatcga gggtgacgcc ggtgtcgcgg gccagttgcc
       61 acaccggttt gatcaccgga ccggaccgca gcatcgtttc ggtgccgacc tcgaagatct
      121 gggctgcgtg cggcgcttct ccggcccgcc aggccgaggc catgacaacc atcagctcct
      181 tataagcgcc cttataaagc ccgctaacct gcacccggcc ctgaccggca ttgaaccggt
      241 cgatcagttt ggcgaattcc tcgcccggcg ccgaccccat tgcgtgccac acggtgattt
      301 cggtgcgctc cgccgcgcgt gtagggcggg ccatcgccag tgcagcgggc gcggcggcca
      361 ataccgagcg acggcgcagc cgaagccgca aatccgcagt cagtgcctga tccactcctt
      421 catgaagcgg gcatagcaat cccgctcgcc cggcattttc ggccagccgg cgagttgccg
      481 caccgccacg agcaacaacc ggtcccgcaa atgggtcgag ttgtgctcat actcctggaa
      541 cgccgagtgg gtgatcttct ggttgtgcgg gtcatcctgg aacttgctgg cgaccagcgc
      601 gacggtggcc atgtatttgg accggtcggc gcccgattgc agataggcat gcgccaccgc
      661 ggtcgaacgg gcgatgtcga acgccagaat cgcctcgtcg agttcacgca gcaatccatc
      721 cggatcgcgg ttggcgaaat cgtagccggc gatttcgctt tcgatcaccg atttggacca
      781 tttgttggcg cgtgcagaat cgttgacgaa gtttgccatc atataaagga tgcgcggctg
      841 atacggactg ttgctgctac ggaaccaata gttgccggtg ttgcaatagt cgaacgggtg
      901 ctgcccgtcg gtgaacgcac gcggcacagt gttgcgcagg atcaattcgc cggcggcgag
      961 ctgaattgta tcgccaagcg aacggatgga tatgccgttc ttcaggtgct cggtgagctg
     1021 gccgaacacg gtcgcctgat cgccggtcat cagcatgtcg acgaacgcct cgacctcgcc
     1081 cgcggataac ggggtctggt tgctctgcac gaggcttttg ccgagatcgg ggaaagcgtt
     1141 ggtcagttgg acgcagacat aatcatacag cgagtagtac agcggcccga ccgccatgtc
     1201 cggcacgccg gtataaaaca cgccatgcgc gcgttcccac ccgacgtgat cggcgaggcc
     1261 gacgatcgct cgcgcccgca gtgccttgtg gccggtattg cgcgccttgc gcccgacgat
     1321 ggtgtcctgc acgtcgatca ggccaaggaa cagcaattga tcgcgcagcc tgtcgcgcgc
     1381 ggtctcgtcg gcagcgaggt cgaggaacat gccataagac cgttccacct ggccgcccat
     1441 ggtcgccagc atgtgggcgt tgagccgttc atccagtgtg ccgccttcgc gaatgggtgc
     1501 gacatcctgg ttccatacca ccggcccgta ctccggcggc ggcacgttca tgcccttcat
     1561 ggtggcgtaa cggccgggat atttgccaag cagctggttc cagatgtcga gaccggcggg
     1621 aatgtaccaa acgctttgca gcatcggcag cagccggtac tgctcgggca gatagggcgc
     1681 cagatcagcg gaagtgcgca ggccaaggat ggtgtgatcg ttgttgacca gcacgacctg
     1741 accgtctttg acattgatgt gattgggcac ctggacgaac ggcgcctcgg cggcggtaac
     1801 aacgctcagc gcctcgccca ccgagcggcc ctcatcggta accatcttgt aaaacagatc
     1861 ggtggtgcgc ggctgatcgc gttccaggat ggcggcggtc agcgcgtcaa acgctttgtc
     1921 gttgcgtaac gtcgcgaggt cgagcggcat tggcttatct ccggattttc cttgcgggaa
     1981 gcctacgctc acattc
//
LOCUS       DATAVD010001945         2685 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3342342, whole genome shotgun sequence.
ACCESSION   DATAVD010001945 DATAVD010000000
VERSION     DATAVD010001945.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2685
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3342342"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..689)
                     /locus_tag="VHX39_37045"
     CDS             complement(<1..689)
                     /locus_tag="VHX39_37045"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03860.1"
                     /note="This protein belongs to a clade of FMN-dependent
                     monooxygenases, within a broader family of
                     flavin-dependent oxidoreductases, the luciferase-like
                     monooxygenase (LMM) family, some of whose members use
                     coenzyme F420 rather than FMN; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NtaA/DmoA family FMN-dependent monooxygenase"
                     /protein_id="HEX3996810.1"
                     /translation="MGKRQMHLGVFVLGTGNHSAGWRYNGAATSNNQLPVIQEIARTA
                     ERGKFDLLFVSDGLVMNPGDHPSFLCRFEPTTLISVLSAVTTHIGLGATVSSSYSEPY
                     NVARIFASIDHISNGRAAWNIVTSTQPMAARNFSRDEQMDHEHRYEVANEFVDVVKGL
                     WDCWEDGAIVADKTTGQFIDAAKVRPLNHEGRFFQVRGPINMARSPQGHPVIIQAGGS
                     PSGLELAARTA"
     gene            1196..>2685
                     /locus_tag="VHX39_37050"
     CDS             1196..>2685
                     /locus_tag="VHX39_37050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEX3996811.1"
                     /translation="MRHLFTDVLIVGAGAAGLYAAIEAARRGAKVMVLDRSLIGRGGA
                     TVMAQMTVAAAVGPEGTDHWQHHYSDTIAAGRGLCDPALARLLCEEGVDVIREMDRWR
                     VGWARAGGRLAAVQAPGHDRARCVYVDFLATGSAVSKTLRGVAQRTPGITRLGDALVT
                     DLVTQDGAVTGAVALHVESGQPVIVGANATIIATGGLTSLYRRNSASANMAGDGYALA
                     LRAGAELIDMEFVQFFPIGHLAPRLIGMDPIMWDPFRYKLGGRLLNGLGQEFVERYGS
                     TDSGRYVVTRDLATYAITKEVAAGRGSPNGGAWLSFRHVPPTQLRDAFGPVIDRLAAN
                     GIDLARDDVEVSPIAHYHMGGIRVNARMATRISGLYAAGEAVGGANGANRLSGNAITE
                     ALAFGRAAGRSAAEHPRSPDFDTDKALTAAALVVAEGPLCNTAELLWRLQSIMSDHVG
                     PFRNEAGLTAAREAVHALHADAGTVPPGSARMHDLARVEWFTLRHAL"
BASE COUNT          499 a          816 c          865 g          505 t
ORIGIN      
        1 tcggcggtcc gcgcggccag ttcgaggccc gatggagaac ctcccgcctg aatgataaca
       61 ggatgtccct gcggtgagcg cgccatgttg atggggcctc tgacctggaa gaaacggcct
      121 tcatggttta gcggccgtac cttcgccgca tcgataaact ggccggtcgt cttatcggcg
      181 acgattgctc cgtcttccca gcaatcccac aatcccttga cgacatcgac aaattcgttg
      241 gcgacctcgt agcgatgctc gtggtccatc tgctcgtcgc ggctgaaatt gcgcgccgcc
      301 atcggctgcg tgctggtcac gatattccag gcggcccggc cgttgctgat gtggtcgatc
      361 gaagcaaaaa tccgcgcaac gttgtacggc tcgctgtagc tggacgagac tgtggcgccc
      421 agtccgatgt gggtcgtcac ggcactgagc acagaaatca acgtcgtcgg ctcgaagcgg
      481 cacagaaatg agggatgatc gcccgggttc atgaccagtc cgtccgacac gaacagcagg
      541 tcgaatttgc cgcgctcggc tgtgcgggcg atttcctgga tcaccggcaa ctggttgttg
      601 ctggtggcgg caccgttata gcgccagccg gcggaatggt tgccagtgcc gagaacgaag
      661 acgccgagat gcatctgacg cttgcccatg ccactctcct tccgccaggt ctgctcgccg
      721 acaggtcgcg cacaaacgac ctggtgacgg tcggattatg ccgggccaga agaggaagcg
      781 gaagcgcctg cgtcctgctg ggatctccaa ataaaaaaaa ccgaatcgcg aaaacagatg
      841 accgcgaagt tggaatcgca cccatggggt gttacggtcg atcagggtaa atcgtgatca
      901 ggctggtgcc agaggcttag cgctccaggg tgacaaccct gtttgcacac gtttcgatat
      961 cgttatggtc tgggcccaag actccgcttg ggaaatgggt cgccgggagg tcaaagaaga
     1021 cgtatgactc gcaaacaata tcgatgaaca ggatccacgc agtgcaggtc gcgttggtca
     1081 acccaggtct ggttatccga cagataccga gggtcattac cgtcaccgca agtgatcgcg
     1141 acgccatcat cgaccggctg tgcgcggcct gctgcaaccc acgggccgtc tccggatgag
     1201 gcatcttttc accgatgttc tgattgttgg agcgggcgcc gccggtcttt acgctgcgat
     1261 cgaggcggcc cgtcgcggtg ccaaggttat ggtgctggat cgcagcctga tcggccgagg
     1321 cggcgcaacg gtcatggcac agatgaccgt ggctgcggct gtcggacccg agggcaccga
     1381 ccactggcaa catcattatt ccgataccat cgctgccggt cgcgggctgt gcgaccctgc
     1441 tcttgcacgc ctgctgtgtg aagaaggtgt cgacgtcatc cgcgaaatgg atcgttggcg
     1501 tgtcggctgg gcgcgcgctg gcggccggct ggcggcggtg caggcgccgg gccacgaccg
     1561 tgcacgttgc gtttatgtcg atttcctggc aaccgggtca gcggtatcca aaacgttgcg
     1621 cggggtggcg cagcgcacgc cagggatcac gcggttaggc gacgctttgg tcaccgacct
     1681 cgtcacccag gacggtgcgg tgaccggtgc ggtggcactg cacgttgaaa gcggtcagcc
     1741 ggtgatcgtc ggcgccaatg ccacaattat cgccaccggc ggcctgacca gcctttaccg
     1801 ccgcaatagt gccagcgcca atatggcggg ggacggctac gctctggcat taagggccgg
     1861 ggccgaactg atcgatatgg aattcgtaca attctttccc atcggccatt tggcgccacg
     1921 gctgatcggc atggacccca tcatgtggga tccattccgc tacaaacttg gcggccggct
     1981 gttgaacggt ctgggccagg aatttgtcga gcgttacggc agcaccgact ccgggcgcta
     2041 cgtggtgacc cgcgaccttg caacctatgc catcaccaag gaagttgccg ccggccgcgg
     2101 ttcaccaaac ggtggggcct ggctgagttt tcgtcatgtt cctccgacgc aactgcgaga
     2161 cgcgttcggt ccggtgatcg accggctggc cgccaacgga atcgatctgg cgcgggacga
     2221 tgtcgaggta tcgccgatcg cgcactatca catggggggc atccgggtga acgcgcgcat
     2281 ggcaacccgc atatccgggc tgtacgccgc aggcgaggcg gtcggcggcg ccaacggtgc
     2341 caatcggctg tcgggcaacg cgataaccga ggctctggcg tttggtcgcg cggcggggcg
     2401 tagcgcggcg gagcacccgc gcagcccaga cttcgacacc gataaagcgc tgaccgccgc
     2461 ggcgttggtc gttgccgagg ggccattgtg caacaccgcc gaactgttgt ggcgcctgca
     2521 atccatcatg tccgatcatg tcggcccatt ccgcaacgaa gcaggtctca ccgctgcacg
     2581 agaggcggtc cacgcgttgc acgccgacgc cggaacggtg ccccccggca gcgcccgaat
     2641 gcacgacctc gcacgggttg aatggttcac cctgcgtcac gcact
//
LOCUS       DATAVD010001946        13914 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2976260, whole genome shotgun sequence.
ACCESSION   DATAVD010001946 DATAVD010000000
VERSION     DATAVD010001946.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 13914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13914
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2976260"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..805
                     /locus_tag="VHX39_37055"
     CDS             <1..805
                     /locus_tag="VHX39_37055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996812.1"
                     /translation="FLFESYVDAQCHSRSDGLYYILAYLLMLGGAFLYYYLCVLPQAW
                     QERFQDYRALAEALRVQLYWAIAAVPASVSDHYLRKQSGELGWIQFALRGPALWAASV
                     AGNTRKPLRNIIKRGWINDQESFFASKAELNRRAAEGAELFTTIFVALGVAGALALSA
                     LFFVQTQSGEPPSCPFEGHRWLIVLTATMPAVAIFFAVSARLRSYWPHAHAYALMRRM
                     FRRAGGLMNVSGASDDQFQNIVRELGREALSENAEWLGEHRNRRIEPGS"
     gene            1017..1316
                     /locus_tag="VHX39_37060"
     CDS             1017..1316
                     /locus_tag="VHX39_37060"
                     /inference="COORDINATES: protein motif:HMM:NF014124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RyR domain-containing protein"
                     /protein_id="HEX3996813.1"
                     /translation="MGDVLALAGLTLSNDPARPDANLPADLEPMAEAEHNGWMAQRAR
                     SGWSWAATRDDDAKHHPSMMPYTQLSEREKEKDRNNIRHYPEFAARAGYRIVRLA"
     gene            1383..2507
                     /locus_tag="VHX39_37065"
     CDS             1383..2507
                     /locus_tag="VHX39_37065"
                     /inference="COORDINATES: protein motif:HMM:NF012927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
                     /protein_id="HEX3996814.1"
                     /translation="MNDTLPAARPLLFTPMTIRGVTLPNRIVLAPMVQYRCRDGIPGD
                     FHLVHLGKFALGRFGTVMTEATAVEARGRVTHACPGIWSDQQIPAWRRITDYIRAEGS
                     VPAMQLAHSGRKGATHRAQENTRPYDAQNAWPVVGPTTEPTSAGHHVPHALSPSEIAD
                     VVQAYADAASRADAAGFDIAEIHGAHGYLLASFLSPISNTRTDQYGGDRAGRMRFPLE
                     VTRAVRSVWPAAKPLFFRVSALDGAGGWKLDDTVALALELKALGVDVVDCSSGGLTGT
                     ATAAPIPRHAGFQVPFAAAVRKSGVPSMAVGLILDGAQAEQILRDGDADLIAIGRQAL
                     YDPFWALHAAEALGCDPGFTMWPDEYGWWLAKRSQSLVRA"
     gene            2950..3627
                     /locus_tag="VHX39_37070"
     CDS             2950..3627
                     /locus_tag="VHX39_37070"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3996815.1"
                     /translation="MNEVIRIKVDDMAKTSVLIAESHTLMRHALVALLREARPDWACD
                     DVDGVDELRARINECSPTLVLIDLRLCGLDGLRQLRLAFPHTTFVVLSDQDDRTAILT
                     CLEAGAQGYILKSTNPEQFIRALETILTGGLYAPASLSGMPIHPPMTANRSDFQLSPV
                     LSHLTERQRHVFELLAEGCATKTIARRLDLAVGTVKVHLAAIYRTLGASSRLEALAKA
                     HRAYASV"
     gene            complement(4727..5341)
                     /locus_tag="VHX39_37075"
     CDS             complement(4727..5341)
                     /locus_tag="VHX39_37075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996816.1"
                     /translation="MPHDLASRMIFRTVFDVAQAGYTTRWFPAYGLIFVCAGTLFLCW
                     RALILKLMPIRGPDFLDFLELLHFWPVPARRFFGWAFLGFALMWCLLTFASTYEEYRT
                     MIAALRDGRFGVVEGPITGFVPVGYSGRSEESFTVGGQRFAHSDYVVTPGFHNTSSHG
                     GPIPEGLYVRVTYLGNLIVRLEVGEQSPGRGPEMTVRDWFGRLA"
     gene            5621..6355
                     /locus_tag="VHX39_37080"
     CDS             5621..6355
                     /locus_tag="VHX39_37080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019015825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEX3996817.1"
                     /translation="MLILRVGRLSICGGNDAQLLRKHGISSEHTESGRDSLEFLRLYD
                     YDLVLMDLDLPDMPGHEAIRLARAAGLSTPSIVLAEAAAPQIKVKALDQGADDFVTTP
                     CHPEELLARVRAVVRRSQGHANSVLRLGPVELSLDRHEVRVNGQKLSVSRREFGVLEL
                     LFLKQGVILNKNAFLNHLYTGMEEPEMKTIDVIICRLRKKLAVAGVPNLIDTVWGCGY
                     ILREPRTETEPANLAGVFHGAAQAAA"
     gene            6494..7432
                     /locus_tag="VHX39_37085"
     CDS             6494..7432
                     /locus_tag="VHX39_37085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEX3996818.1"
                     /translation="MTGAGALGLRAWAGPPLPQADQPTVGAPAFSQSALDIRDVGRSR
                     PVTEVETTADPLNECERAGIAMERLNGLPPGLLLAIGRVESGRWDSVRGRVTAWPWTM
                     NAGGKGVWFATEEAAARTVRDLLNGGTRSIDVGCFQINLLWHPTAFASLEQAFDPDSN
                     AAYAAHFLLELFGQTGSWEAAVEAYHSMDPALGYAYRLQVFSTWAAAPPSTAIPSIRA
                     RGFPSLAAASRPVAMPMVIAGIQIWTPMPFGTASGVVAMPGPPALEQPRAPTGAAAPL
                     PVVLYHAMPPGVRSPRAMRTKVEASRVVSAEDTPSR"
     gene            7864..8034
                     /locus_tag="VHX39_37090"
     CDS             7864..8034
                     /locus_tag="VHX39_37090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007424585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEX3996819.1"
                     /translation="MIEYAKTWLDLKLDRRAVTALEYGLIAGVIVAVITLGFTTLANS
                     LSTKFSGIGSSL"
     gene            8138..8698
                     /locus_tag="VHX39_37095"
     CDS             8138..8698
                     /locus_tag="VHX39_37095"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:NF013632.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A24 family peptidase"
                     /protein_id="HEX3996820.1"
                     /translation="MSHLMSHSWSSAIAAMMILASAVVVLLAAWHDLISRTVPNWMPV
                     MIAGLGAVAALVSSRLLISMGLGLAIFVVAAICWRRGLMGGADVKLLGAIAIALPPGM
                     VSMFVLAMSVAGAVHAVAYMMARRVVTRPPVLTLETPGIPPRTRRLLPRALRAERWRI
                     SRGGPLPYACAIAFGFLFVVCNGAAS"
     gene            8695..9573
                     /gene="cpaB"
                     /locus_tag="VHX39_37100"
     CDS             8695..9573
                     /gene="cpaB"
                     /locus_tag="VHX39_37100"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HEX3996821.1"
                     /translation="MIVRVAFFILMSLGLIGFGTVAWITTRPMGLGGPPPTKMILVAA
                     VQIDAGSLVTADDLQQKEIPVTEMTKEYNIDTPDIRRGLMGAMVKRNLGVGEAIRSDD
                     IMRPSDHGFMAAVLSPGMRAVTINVDAASGSSGLIWPGDRVDLILTQVNNDPNASIGR
                     RISAHTVLSNVRVVAVDSQLVAGPNRNAAAIVDAANRTVTLEVDEDQAQRVAVGMRLG
                     RLSVSVRASSTVAGNAKTPTKNDATFAQDILPDLVEKPAAAPVAPVIVAAPPPAPVEP
                     PMRVFSGPGDAKEFKF"
     gene            9573..11147
                     /locus_tag="VHX39_37105"
     CDS             9573..11147
                     /locus_tag="VHX39_37105"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II and III secretion system protein family
                     protein"
                     /protein_id="HEX3996822.1"
                     /translation="MQVLTGKLLTGKFLEIGVALCLLAARPALAADEATTRLAQNGPP
                     ATEQPVPGTTIPGSAAPGVTAGQEQGAQPGVVPPAAAPAATPQPTAEAPKPFHGSVSF
                     EAGSGKILTLALPAANIYVADPKVAEVRPASATSLFVFGVGAGHTTIAAVDQFGRLLV
                     DYDVTVRPSAFGAREAQSAIARLVPGSRVQVRASGKGIMLTGAVATAADAAQAMLIAK
                     GFSNGDGANVDNQMTIAAPTQVTLMVRIAEMKRSTARNIGINWSANGLLGTVPGAKVP
                     SNTTPLITGMLNTAACAVGSGAGRLCFDSVINALASEGLAHILAEPNLTVMSGQAASF
                     QAGGEYPYAVPGGSANPNSVTIDFKPYGVLLSFVPTVLSNGRINLHVKPEVSQLDTTN
                     TVQLPGGGTVDGLLVRRSETTVELGSGESFAIAGMLQTVSANNDSGLPGLGDTPIIGG
                     LFKSNNMTREQTELVIIVTPILVRPVQNMAQLHTPTEGYEVPGDIDRLLLMRQVPNRD
                     GTVTAPPPGSAGFIVR"
     gene            11156..11620
                     /locus_tag="VHX39_37110"
     CDS             11156..11620
                     /locus_tag="VHX39_37110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996823.1"
                     /translation="MRNTFNKAPGQSTPGTLPGTTTGAPGAGTPGSRTPGTKPPGTRT
                     PGARTLWVAAAVSLVALTGCDQIDPLKRPYMWHATGINNQNIAAMAVNPADMVHGRES
                     SQRRVVVESDGVTRLWTGHSLPLLSDTPGASASTSSSSGGGGGATSTSGGGS"
     gene            11624..12898
                     /locus_tag="VHX39_37115"
     CDS             11624..12898
                     /locus_tag="VHX39_37115"
                     /inference="COORDINATES: protein motif:HMM:NF018290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose synthase operon protein YhjQ/BcsQ"
                     /protein_id="HEX3996824.1"
                     /translation="MPPEDGRLNLAAVVPPQDQNAGRHDRPSLVAFLTDRESEDALRE
                     GLSEATSETLDVRRGGIRAAIGVMQKSATPRVLVIDISGEEQPLSALSELSHVVEPDV
                     CVLVVGEVEHADFYREITRGLGAAEYLSKPLTRDKVLRHFGPFGQGSAFATPAMLGGR
                     AIAVTGVRGGVGATTIAVNLAWHFGVGMRRHTVLLDPDTHLGSTAFLLNIQPGPGLRM
                     ALESPDRIDSLLAERAAIPAADRLHVLAAEEKIASQASHAAGAGAALLTALRNRYNFI
                     IVDVPFAPVPLFRDLLDLVDQRILVMDPSLAAIRDTVRLLGLPKGPAQDQRAVVVLNR
                     TGVPGGLSRKQVEEALKMKVDVAIPDLPRAVGNAATLGEPVMVSSTGFRHGIVDIVRQ
                     VASIRLLDGGQDGSMSTAGQGKRSLFSKLRRK"
     gene            13006..>13914
                     /locus_tag="VHX39_37120"
     CDS             13006..>13914
                     /locus_tag="VHX39_37120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HEX3996825.1"
                     /translation="MRELMDAGSPITEAIVTELRNACLARLDPNAVAAMPAERLIMDV
                     ERLVSEIASERRYQLNGREQHILANELVHDITGLGPLEQLLEDDQIADIMVNGPHRTF
                     VEKSGKVTLANIHFRDQAHLMNVCQRIAAAVGRRIDESSPMVDARLKDGSRVNIVFPP
                     LALEGPYVSIRKFGKKAVDFAQLVRWKALTLPVARVLEIASQARLNIVVSGGTGSGKT
                     TMMNAMSRLIDHGERVITVEDAAELQFQQPHVVRLETRPNSLEGRGEVNQRDLVRNAL
                     RMRPDRIIIGEVRGGEAFDMLQAMNTG"
BASE COUNT         2715 a         4263 c         4194 g         2742 t
ORIGIN      
        1 gttcctcttt gagagctatg tggatgcaca gtgccactct cggtccgacg gcttatatta
       61 tattcttgct tatctcctga tgctcggcgg agcgtttttg tactattacc tttgcgtgct
      121 ccctcaggcc tggcaggaac gtttccagga ttatcgggct ctcgccgaag cgctgcgtgt
      181 gcaactgtac tgggctattg ccgccgtccc ggcatccgtc tccgatcatt acctgcgcaa
      241 acaaagtggc gagttgggtt ggatccagtt tgccctgcgt ggtcccgcgc tttgggcggc
      301 ctcagtggcc gggaacacgc gtaagccgtt gcgtaacatt atcaaacgag gttggatcaa
      361 cgatcaggaa agcttcttcg ccagcaaggc cgaattgaac cgtcgcgcgg ccgagggcgc
      421 ggaactcttt acgacaatct tcgtcgcgtt gggcgtcgct ggagcccttg cgctcagtgc
      481 actgtttttt gtgcaaaccc aatccggtga accgccgtca tgtcctttcg agggccatcg
      541 ctggctgatc gttctgaccg cgacgatgcc agctgtcgct atcttctttg cggtttcggc
      601 gagattgcgc agctactggc cgcacgcgca cgcctacgcc ctcatgcgtc gcatgttccg
      661 gcgggctggc gggctcatga acgtttcagg cgcatccgac gaccagtttc agaacatcgt
      721 tcgcgaactc ggccgcgaag cactctcgga aaacgccgaa tggttgggcg aacaccgtaa
      781 ccgcaggata gagcccggct cttgatgagg gccggaacca ggtccatcga gacagcgttc
      841 agcgttatgg gaaatcacct cgcatggcag agccagattc cgtcgccgcg gcgatccatg
      901 acacctggag gagcctctcc cgccgggaag gttggtcgtt gtctccgcat ctggaccgtg
      961 cttttgccga cctcgctgaa caagataagg aagacaaccg tgcagccgcc aggcgcatgg
     1021 gcgacgtgct ggccctggca ggtctgacgc tcagcaacga cccggcgaga ccagacgcaa
     1081 acctgcccgc cgacctggaa cccatggctg aagcggaaca caacggttgg atggcgcagc
     1141 gcgctcgatc cggttggtca tgggccgcaa cccgcgacga cgacgcgaag caccacccgt
     1201 cgatgatgcc gtacacccaa ttgtccgagc gggaaaaaga aaaggatcgc aataacatcc
     1261 gccattatcc ggagtttgca gcgcgcgccg gctaccggat cgtgcgcctg gcctgagcgt
     1321 tgtcttggcc cggccagccg gatcagcgat gatcgcaccg tcacgacgga acgaccacgc
     1381 aaatgaacga cacgctcccc gctgcccgtc ctcttctgtt caccccgatg acgatacggg
     1441 gtgtcacgtt acctaatcgc attgttctcg ctccgatggt gcaatatcgt tgtcgcgatg
     1501 gcatccccgg cgatttccac ctcgtccacc tgggcaagtt cgcgcttggc cggttcggta
     1561 cagttatgac cgaagcaacc gccgtcgagg cacgcggacg cgtcacccac gcctgcccgg
     1621 ggatttggag tgaccagcag attccggcct ggcgtcgtat caccgattac atccgagccg
     1681 agggcagtgt gccggcgatg caactcgcgc attccggccg caaaggtgcc acccatcgcg
     1741 ctcaggagaa cacgcgccca tacgacgcgc agaatgcttg gccggtcgtc ggtcccacta
     1801 ccgaaccaac cagtgcgggc caccacgtgc cgcacgcgct atcgccttcc gagattgcgg
     1861 atgtcgtgca ggcctacgcc gacgcggcga gccgcgccga tgcggcgggc ttcgacattg
     1921 ccgagatcca cggcgcgcac ggttacctat tggcaagttt cctctcgcca atcagcaaca
     1981 cgcgcaccga tcaatacggc ggcgaccgcg ctggtcgaat gcggtttccg ttggaagtga
     2041 ctcgagcggt ccgctcggtc tggcctgccg ccaagccgtt gttttttcgg gtatcggcgc
     2101 tggatggcgc gggtgggtgg aaactcgacg acacggtcgc gttggctctc gagcttaagg
     2161 cgctgggtgt ggatgtcgtc gattgctcat caggaggact gactggcacg gcaacagccg
     2221 cgccgatccc gcgtcacgcc ggcttccagg tgccattcgc ggcggcagtg cgcaaatccg
     2281 gggtgccttc gatggcggtg gggttgatcc tggacggagc ccaggccgag cagatcctgc
     2341 gcgatggcga cgctgacctg atcgcgattg gccgccaggc gctgtacgat ccgttttggg
     2401 cgttgcatgc cgccgaggct ctgggctgtg accccggctt tacaatgtgg ccggacgaat
     2461 acggctggtg gctggcgaag cgatcgcagt ctttggtccg tgcataatcc ggtccttcgt
     2521 gtcgtcgcgg ctgagtatgc tgttccgacc tgggccggtc ccgacgacgg tccctggtcc
     2581 cggcgtcccg cgtcgatagc ggactgaagc gggtttcgat tttccccggc aggtatcgtt
     2641 ggttacagtt gtatcaccaa tgcggtattc cttgccgaaa gttcatctgg tgccacaccg
     2701 catctctggc ggcccgggta tgcaaaaagc aggtcgaaca acgatttgtg aggcgaccgg
     2761 accgccatct gccgattccc gacgcacgcc atggtcgccg gattgtatca atacctacag
     2821 tttcctttcg acaattttgc cgtgaacgcc ggtcacggca aaaaagtgta aattagttgt
     2881 gaccagccct tcagttagct gacggtacgt tcatttaccg gtcatgcgat acccttgcga
     2941 ggctcgatcg tgaacgaggt catcaggatc aaggtcgacg acatggcgaa aacctctgtc
     3001 ctcatcgctg agtcgcacac tcttatgcgg catgcgctgg tcgcactgct acgcgaagcg
     3061 cgaccggact gggcctgcga cgatgtcgat ggcgtggatg aattgcgcgc caggatcaac
     3121 gagtgttcac ccaccctcgt gctgatcgat ctgcggctgt gtgggctcga cggcctgcgt
     3181 cagttgcgtt tggcatttcc gcacacaacg ttcgtcgtgc tgtcggacca ggacgaccgg
     3241 accgcgatcc tgacctgcct cgaagcggga gcgcagggtt atatcctgaa atccaccaac
     3301 cccgaacagt tcattcgcgc gctcgaaacg atcctgaccg gcgggctcta cgcaccggcg
     3361 tcgttgagtg ggatgccgat tcacccgccg atgacggcga atcgttccga ctttcagcta
     3421 agtccggtct tgtcgcatct gaccgaacgg cagcgtcatg tattcgaatt attggcagaa
     3481 ggatgcgcca cgaagaccat cgcgcgtcgg ctggacctgg ccgttgggac ggtcaaggtg
     3541 catctcgcag cgatttaccg cacgcttggc gcatcgagcc gtttggaggc tcttgccaaa
     3601 gcgcatcgcg cctacgcgtc ggtttagcta aatgcctgcg gtgtcgaatt cctgaaccat
     3661 catcatctcg acgagcacat ctccccaagt gtgcacctca gctgcgggag ttatcgcgtt
     3721 ccgacggata gcaggccaac ttatggaggc ctcatttgac gcatttgccg gacaggagga
     3781 aatcctcatt tcaggctagt aattataagg tggcgtccca tttcggcggc tccgtcgtgc
     3841 cactgcccgt cccaggcaat acttaggcga cgctcatcgc tcgttacttc gtccgacgta
     3901 gcctgtaggg tcactcgaag gtgagtctca ccggtatagc ggcccccgaa gttattgggg
     3961 tgaatgattg gcctcaagca caattcgcgt tggcgcgttc tcggatcgtc gttggccgta
     4021 agaagaacgg cgcgggcggc ccttccaact gttcgagtga gaggatgtat ctcggggtgg
     4081 ttccatgtca aagggatctc gcccctccag acgggcagtg gcacgttatc tgggccatat
     4141 cgttctaacg gagtgatcaa aatctgcacg ttgtgagcaa tgggccatcg gcgactgttt
     4201 accgcttcga catgatagaa acgcgcctgt cgttcgtacg tcgttggttc gggaccctgt
     4261 ggattcgtaa tcatctcggt tatcgactcg cctaaagtat cgagaatctg gacacaaagc
     4321 atcggcttga agagcattga acggatcttc tctccccaaa tggctgctac gaagacacac
     4381 catgttcctg cgactcctgc tgcaaataac catgtcggtg gacccatatt catcgctcca
     4441 taccggtgca ccgtataatt tcacaatacg ccacaatagg ccatggccac ctactcgcac
     4501 acctttgagg aaaatctgcg ccgctgcatc cgtgccttca aagcgctcga ccagctcatt
     4561 acttacgcga gtctgaccga gaagctcaac aagcggttca accgctcatt cgacccgcgc
     4621 tacatagcga cgctttcgcg gaaggttgat cgccagctca tggtggaaat cgattttgca
     4681 actgaactgc gagattgcct tgccatgccg cgaagatcga agcggattat gccaaccgac
     4741 cgaaccaatc tcgaaccgtc atctccgggc ctcgacccgg tgattgctca ccgacttcga
     4801 gccgcacaat taaattaccg agataggtca cccgcacgta cagtccctca gggatcgggc
     4861 caccgtgcga gctggtatta tgaaacccgg gcgtcacaac gtaatccgag tgggcgaaac
     4921 gctgaccgcc aacagtgaaa ctttcctcag aacgtcccga gtaccccact ggcacaaatc
     4981 cggtaatggg accttcgacc acgccaaacc gtccgtcacg cagcgccgcg atcatcgttc
     5041 ggtattcctc gtaggtggac gcaaaggtca gcagacacca catcaacgcg aagcccaaaa
     5101 aagcccagcc gaaaaatctt cttgctggaa cgggccaaaa atgaagcagt tcgaggaaat
     5161 ccagaaaatc aggtcctctg atgggcatga gcttcagaat cagtgcccgc cagcacagga
     5221 acagcgtgcc agcgcacacg aagatcagcc cgtatgccgg aaaccaccgg gtcgtatacc
     5281 cggcctgagc cacgtcaaaa actgttctga agatcatacg tgatgccaaa tcatgcggca
     5341 cgctaccgcg gtactgcgac ccacaggacc ataacgcaga tgaaaccccg taccgcgaca
     5401 gccaagcaat gaatgatgca cgattgtaac ccacctcatg cccagcaatg cttcgaaact
     5461 tcgggcgaag gacagaattg tcgtacatgc acggtgctac ttagaccatt tggcctagtc
     5521 cccttagtcc tttggcctgg tctcctggcc gaatttaccg aattgaaatt ttccccgaat
     5581 ttcactcctg taaatggttc gttgcgaagg aaacataaca atgttgatac tcagggttgg
     5641 gcggctttcg atctgtggtg ggaatgatgc gcaactgttg cgtaagcacg gcatcagcag
     5701 cgagcatacg gagtccgggc gggactcgct cgagtttctt cgtctgtacg actatgacct
     5761 ggtgctgatg gatctcgacc tgccggatat gccgggtcat gaggcgatcc ggctggcgcg
     5821 tgccgccggt ctttcgacac cctcaatcgt tctggccgag gccgcggcgc cgcaaatcaa
     5881 ggtcaaggca ttggaccagg gtgccgatga tttcgtaacc acaccatgcc atccggaaga
     5941 acttctggcc cgcgtgcgtg ccgttgttcg ccgcagccag ggtcacgcca attcggtgct
     6001 ccggcttggg ccggtggagc tcagcctgga tcgccacgag gtgcgggtaa acggacagaa
     6061 gctgtcggtg tcgcgccgcg agttcggcgt attggaacta ctgttcctga aacagggcgt
     6121 catcctgaac aagaatgcgt tcctgaacca tctctacaca ggcatggaag agccggagat
     6181 gaagaccatc gacgtcatca tttgccgatt gcgtaaaaag ctcgccgtcg cgggcgtgcc
     6241 aaatctgatc gataccgttt ggggctgcgg ttacatcctt cgcgaaccgc gcaccgaaac
     6301 cgagccggcg aacctggccg gtgtcttcca cggtgcggcc caggctgccg cctgatagca
     6361 tcacgcgaga cgaacgatgt ccctggggtc ggccgaaccg acttccccct cggctccccc
     6421 agggccagtc tttcgcaccc ggttaggggc gatattcaag ccctgcctaa gtctcatagc
     6481 ggcggtctgc tggatgaccg gcgccggcgc tttggggctt cgcgcatggg ccggtccacc
     6541 gctgcctcag gcagaccaac cgacggtcgg cgcgccggca ttcagccaga gtgccctgga
     6601 catacgggac gttgggcggt cacggccggt taccgaagtg gaaaccactg ccgacccgct
     6661 caacgagtgc gaaagggctg gcatcgccat ggagcggcta aacgggttac cgcccggcct
     6721 gctactggct atcggacggg ttgaaagcgg acgctgggac agcgtgcgcg gccgtgtcac
     6781 cgcctggcct tggacgatga acgccggcgg caagggagtg tggttcgcta ccgaagaagc
     6841 cgcggcacga accgtcaggg acttgctgaa cggaggcacg cgctcaatcg atgtcggttg
     6901 ttttcagatc aacctgctat ggcatccgac cgcgttcgcc agcctggagc aggcgttcga
     6961 tccggactcc aatgcagctt atgcagcgca cttcctgctt gagttgtttg gtcagactgg
     7021 ttcgtgggag gccgcagtcg aggcttacca ctccatggat ccagcactcg gttatgcgta
     7081 ccgactgcag gtgttttcaa cgtgggcagc agcgccaccg agtaccgcaa ttccatcaat
     7141 ccgtgctcgt ggtttcccat cgcttgccgc cgcatcccgg ccggtcgcca tgccaatggt
     7201 gatcgcggga atccaaatct ggacgcctat gccgtttggc accgcgtccg gcgtcgtcgc
     7261 catgccggga ccgcctgccc tggaacaacc acgtgcgcca accggtgccg ccgcgccgct
     7321 cccggtggtt ctttaccacg ccatgccgcc tggtgtgcga tcgccgcgcg caatgcgcac
     7381 caaggtcgag gcatcacggg tcgtttccgc cgaggacacg ccgtcccgat aatcgaccgt
     7441 ggtgtccatt ccagctacgc ctgctggggc ttgcaacgca actgccaact ccagttcggc
     7501 cgcgttcgat gcgacggcgc gcgtttggcc gccatttccg acaacctgtc agaccgcaat
     7561 tccacgcgca atttcaatgg cacattcatg ggccggacgt tccggcaatc attaactgct
     7621 tcaaagatga attaaccggg cgcccatatt ccggtttggt ttatccccgg gttatctgct
     7681 gatttttcga taccgttccg agaggacggg acaatttatg gagaaaagtt cattagtagg
     7741 ttaattttcg actgatgaaa cccctcagta acttccgctg tgatgattcc cccattgcgc
     7801 ctgttcggtc gaacagacac cggacattcg catctgggca aaatgcactg tgggagtttc
     7861 attatgattg agtacgcgaa aacctggctg gaccttaagc tcgaccgtcg cgccgtgacc
     7921 gcgttggaat atggcctgat cgccggcgtt atcgtcgcgg tgatcacact gggcttcacc
     7981 accctcgcca acagcctgtc gacgaagttc tcgggtatcg gcagcagcct ctgacgttcc
     8041 ctggtttccg ctccgggagc cggccgggcg cggcggcgaa cctcgccgcc gcgtttttgg
     8101 attctggtcg ccagccggtc gatgaacgag gtcccagatg tcacatctga tgtcgcattc
     8161 ctggtcctct gcgatcgccg ccatgatgat cctggcgagt gctgtcgttg tgctgttggc
     8221 ggcatggcat gatctgattt cccgcactgt tcccaactgg atgccggtaa tgattgccgg
     8281 gttgggcgcg gttgcagcgt tggtcagtag tcgcctgctg atcagcatgg gacttggcct
     8341 ggcgatcttt gttgtcgcgg cgatttgctg gcggcgcggt ttgatgggcg gcgctgacgt
     8401 caaactactc ggcgccatag cgatcgcttt gccgccgggc atggtgtcga tgttcgtcct
     8461 cgcgatgtcg gtcgcaggcg cggtgcacgc tgtcgcatac atgatggcac gccgggtggt
     8521 gacccgccca cccgtgctga cactcgaaac gcccgggatc cccccgcgaa cccgcaggtt
     8581 gctgccgcgc gcactacgcg ccgagcgatg gcggatcagc cgcggcggtc cgttgccgta
     8641 cgcctgcgcc atcgcgttcg gtttcctttt tgtcgtttgt aacggagctg cgtcatgatc
     8701 gtgcgtgtcg cgttctttat cctgatgtct ctgggcttaa tcggcttcgg aacggtcgcc
     8761 tggattacca cacggcccat gggcctcggt ggtccgccac ccaccaaaat gattctggtc
     8821 gcggcggtgc agatcgatgc cggcagcctg gtgactgccg acgacctgca gcaaaaggaa
     8881 atcccggtca ccgagatgac caaggaatat aacatcgaca cgccggacat ccgccgcgga
     8941 ctgatgggcg cgatggtcaa gcgtaacctt ggcgtcggcg aggcgattcg cagcgacgac
     9001 ataatgcggc cgtccgatca cggcttcatg gccgcagtgc tgtcgccagg gatgcgcgcc
     9061 gtgaccatca acgtcgacgc tgccagcgga tcgtccggcc tgatctggcc gggcgaccgg
     9121 gtcgacctga tcctgacgca ggtcaacaac gatccgaacg cctcgatcgg cagaagaatc
     9181 agtgcgcaca cggtactttc gaatgtccgc gttgtcgctg tcgactcaca actggttgcc
     9241 gggccaaaca gaaacgccgc cgcaatcgtt gatgctgcaa accggaccgt gacgttggaa
     9301 gtcgacgaag accaggcaca acgggtggcc gtagggatgc gtctgggccg tctttcggtg
     9361 tcggtgcgtg cgtcgagcac ggtggccggc aatgcgaaga cgcctacgaa aaacgacgcg
     9421 accttcgctc aggacatcct gcctgatctc gttgagaaac cagcggccgc gcctgtcgcg
     9481 ccggtgattg tggcggcccc tccgccagcg ccggtcgaac cccccatgcg ggtcttctcg
     9541 ggcccgggcg atgccaagga attcaaattc tgatgcaagt gctcaccggt aaacttctga
     9601 ctggcaaatt tctggaaatc ggagtcgcgc tttgcctgct cgctgcgcga cccgcattgg
     9661 ccgctgacga ggctaccacg cggctggccc agaacggacc accggcgacc gagcagccgg
     9721 tacctgggac aaccatccct ggctcggctg cacccggcgt gaccgccggc caggagcaag
     9781 gcgcgcagcc cggcgtagtg ccgcctgctg cagcgccggc cgcaacgccg cagccgactg
     9841 ccgaggcccc aaagccattc cacggttcag tgtcgtttga ggccggaagc ggcaaaattc
     9901 tgaccctggc gctgccggcg gccaatatct acgtggctga cccgaaagtg gccgaggtac
     9961 ggccggccag tgccaccagc ctgttcgtat ttggcgtcgg cgccggtcac accaccatcg
    10021 cggcggtcga ccagttcgga cggctactgg tggattacga cgttacggtg cggccatcgg
    10081 cgttcggcgc ccgtgaggcg cagtctgcta tcgctcggct ggtccccggc agccgggtgc
    10141 aggtcagggc ttccggcaaa ggcataatgt tgacaggcgc ggtcgcgacc gccgccgatg
    10201 cagcgcaagc gatgttgatc gcgaaaggct tctccaacgg cgacggagcc aacgtcgata
    10261 atcagatgac gattgcggcg ccgacacagg tcacgctgat ggtgcggatt gccgaaatga
    10321 agcggagcac cgcgcgcaat atcggcatca actggtcggc gaacgggctg ctcgggaccg
    10381 tgcccggagc aaaagtgcca tcgaatacca caccgttgat aacgggtatg ctcaacactg
    10441 cggcatgcgc cgtcggcagt ggagccggcc gcctttgctt tgactcagtt ataaacgcac
    10501 tggcgagcga aggtctggcg catatccttg cggagccaaa cctgacagtt atgagcggtc
    10561 aggccgcatc atttcaggcc ggtggtgaat atccctacgc agtaccgggt ggtagcgcca
    10621 atccgaactc tgtaaccatc gatttcaagc cgtatggtgt attgctgagc ttcgtaccga
    10681 ccgtgctgag caacggccgc atcaacttac atgttaaacc tgaggtcagc cagctcgaca
    10741 caaccaacac agtgcagctg ccaggcggcg gcacggtcga cgggttgctg gtgcggcgaa
    10801 gcgaaaccac cgttgaactc ggctcgggcg agtctttcgc catcgccgga atgttgcaaa
    10861 cggtctcggc caacaatgat tcgggcctac ccggtctggg cgataccccg attatcggcg
    10921 gcctgttcaa atcgaacaac atgacccgcg aacaaaccga actggtaatc atcgtcactc
    10981 cgatcctggt gcggccggtg cagaacatgg cgcaactgca cacgccgact gaaggctacg
    11041 aggtgccagg tgatatcgac cggctacttt tgatgcgaca ggtgccaaat cgtgacggaa
    11101 cggtcacggc acctccgccg ggctcggcag gattcatcgt gcgatgaggt cattcatgcg
    11161 caatacattc aataaggcgc cgggtcagtc gacgcctgga acactccccg gcacaacaac
    11221 cggggcaccg ggcgccggaa cgcccggcag caggacgccg ggcacgaagc cacccggcac
    11281 aaggacgccc ggcgccagaa cgttatgggt ggccgccgcg gtcagcctgg tagcgctgac
    11341 cggctgcgac cagatcgacc cgctgaagcg cccgtatatg tggcacgcaa ccgggatcaa
    11401 caaccagaac atcgctgcca tggcggtcaa cccggccgac atggtgcatg ggcgggaatc
    11461 gagtcagcgc cgggtggttg tggagtcgga tggcgtcact cgtctttgga ccggccattc
    11521 gttgccactg ctgagcgata cgcctggtgc gtccgccagt accagcagtt ccagcggtgg
    11581 cggcggcgga gcgacgtcaa catccggcgg aggatcctga cccatgccgc cagaagatgg
    11641 acgcttaaat ctcgccgcgg tcgttccgcc gcaagaccaa aatgccggac gccacgaccg
    11701 cccatcgctc gttgccttcc tgacagatcg cgagtccgaa gacgcactcc gtgaaggcct
    11761 gtccgaagcg accagcgaaa cactcgacgt gcgtcgtggc ggcatacgcg ccgcgatcgg
    11821 ggtcatgcag aaatccgcaa cgccgcgagt gctcgtcatc gatatctccg gcgaggaaca
    11881 accgctgagc gccctgagcg aactgtccca cgtcgtcgag ccggatgtct gcgtgctggt
    11941 cgtcggcgag gtcgaacatg cggatttcta tcgcgaaatc acgcgcggcc tgggtgcagc
    12001 agaatatctg agcaagccgc tcacacggga caaggtgctg cggcatttcg gaccgttcgg
    12061 gcaaggcagt gccttcgcga cgcctgccat gttgggcggg cgggcaatcg ccgtcaccgg
    12121 cgtgcgcggc ggggtcggag caacgaccat cgcagtcaat ctggcgtggc atttcggcgt
    12181 cggtatgcgt cggcacaccg tgctgctgga tcctgatacg catctcggct ccacggcatt
    12241 tctgctgaat attcagcctg gaccaggcct gcgcatggcg ctggaatcgc cggaccgaat
    12301 cgacagcctg ttggccgagc gcgccgcgat cccagccgcc gaccggctgc atgttcttgc
    12361 ggcagaagaa aagatcgcgt cccaggcgag ccatgcggca ggcgccggag cggctctcct
    12421 gaccgcgttg cgcaaccggt ataatttcat catcgttgac gtgccattcg caccggtgcc
    12481 gctgttccgc gatctgctcg acctggtgga tcagcggatt ctggtgatgg atccatcact
    12541 cgcggcaatc cgcgacaccg tccggcttct gggcttgcct aaaggaccgg cgcaagacca
    12601 gcgcgccgtt gtggtgctca accgtaccgg cgtgcccggc ggattgagcc gcaagcaggt
    12661 ggaagaagcg ctgaaaatga aggtcgacgt ggccattccg gatctgccgc gcgctgtcgg
    12721 caacgccgcg acgctgggcg aaccggtgat ggtcagcagc accggctttc gacacggcat
    12781 cgttgacatc gtgcgtcagg tcgcctcgat ccgtttgctt gacggtggcc aggacggttc
    12841 gatgtcaacg gccggtcagg gcaaacgtag tctgttttcc aaactgcgac ggaaataatg
    12901 gtgacagtct ctgttccaac ctttggccgg cgcacaccgg ttgcggccac ccaaacgtcg
    12961 gcacccgcgc ctgcctcaga cggaggatat acgccgccgg agagcttgcg cgaactgatg
    13021 gacgccgggt caccgatcac cgaggcaatc gttactgaat tgcgcaacgc ctgcctggct
    13081 cgactcgacc cgaacgcggt cgcagccatg ccggccgaac ggctgatcat ggatgtggag
    13141 cggctggtct cggaaatcgc cagcgagcga cgctaccagc tcaacgggcg cgagcaacac
    13201 attctggcca acgaactggt gcatgacatc accgggctcg gtccgctgga acagttgctc
    13261 gaggacgacc agatcgccga cattatggtg aacggcccgc accgcacctt cgtagaaaaa
    13321 tccggcaagg tgacgctggc caacattcat ttccgcgatc aggcgcatct gatgaatgtc
    13381 tgccagcgga ttgcggctgc ggtcggacgc cgtatcgatg aatcaagccc catggtcgat
    13441 gcccgtttga aagacggttc gcgcgtcaac atcgtgtttc cgccactggc gctggaaggc
    13501 ccttacgtct caattcgaaa gttcggcaaa aaggcggtcg acttcgcgca gctggtgcgg
    13561 tggaaggcgc tgacgcttcc ggtcgcgcgg gtcctggaaa tcgcttccca ggctcgtttg
    13621 aacatcgtgg tgtcaggcgg aacgggttcc ggcaaaacca caatgatgaa cgccatgtcg
    13681 cggctgatcg atcacggcga acgggtgatt accgtggagg acgcggctga attgcaattc
    13741 cagcaaccgc atgtcgtgcg tttggaaacc cggccgaata gtctggaagg acgcggcgag
    13801 gtcaaccagc gcgatctcgt gcgcaatgct ctgcgtatgc gacctgatcg catcatcatc
    13861 ggcgaggtgc gcggtggcga agccttcgac atgttgcagg ccatgaacac cggc
//
LOCUS       DATAVD010001947         2298 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2976275, whole genome shotgun sequence.
ACCESSION   DATAVD010001947 DATAVD010000000
VERSION     DATAVD010001947.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2298
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2976275"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..930
                     /locus_tag="VHX39_37125"
     CDS             <1..930
                     /locus_tag="VHX39_37125"
                     /inference="COORDINATES: protein motif:HMM:NF019157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /protein_id="HEX3996826.1"
                     /translation="SIDKKVTARCDAIDGATDGLVQNPAACPIHAEDLACHGGDTSDC
                     LTPDQERVLHSYTTPLHDRHGHMLYPGWNITNLSGPRGISYWTTGNTPPDLTNAELPW
                     GNNPDAPPRGWVFARQALTYWLGLGPEQKMAALDVDPLTNTVGDTVVAMVESTFAPAE
                     TKNPAKLLPFIRRGGKLIIYHGTSDPAIPPARSILFYQQLTGTLHGTDKTAANVRLFL
                     VPGMQHCSGGIGPDRFDTLSAIEAWTEHRRTPDSIAASTKPDAAVMHRLPLCPFPKQA
                     RYSGHGEMTDVANWSCAPPAPDTASAAHSGRAG"
     gene            956..2158
                     /locus_tag="VHX39_37130"
     CDS             956..2158
                     /locus_tag="VHX39_37130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014242392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HEX3996827.1"
                     /translation="MKIARIETFLFDPGLAKNLLFCRVETESGVHGWGEAYVTPGKEQ
                     VIEHLLQVMANYMIGRSAHSIRHSAQVIFDDFAMRRASLDLLSAWSAIEIAMWDIVAK
                     AAGQPLYNLLGGPSRERIKVYANGWASGPATIEENLERALKVKEAGYTALKWDPFPGP
                     WRNFIHREDEDHVVRYVRRMRETLGPDFGLLVEVHRRLAPMHAVRIGQRLAEFDIGWY
                     EEPCLCDNIELVAEVRRALPGVPIVTGEAIYSKEAFAQALTARAADIINPDICNCGGI
                     SAMLDIAAMAQPHAVAMAPHNYNSTLVGLAATVQLSAVIPNFWLAECFINLKPACDEI
                     AIQPLTVKDSFVELPTTPGHGIDLDVAKLRAKPYRDMGARTGKSLRSYTEEFPRKHYQ
                     VAATRTGY"
BASE COUNT          455 a          702 c          731 g          410 t
ORIGIN      
        1 tccatcgata agaaggtgac cgcccgctgc gacgcgatcg atggcgcgac cgacgggctg
       61 gtgcaaaatc ctgctgcctg tccgatccac gccgaggatc tggcgtgcca tggcggcgac
      121 acctccgact gcctgacgcc ggatcaggaa cgtgtgctgc acagttacac cacgccgttg
      181 catgaccgtc acgggcatat gttgtacccc ggttggaaca taaccaacct gtccggaccg
      241 cgcggcatca gctattggac caccggtaac acgccacccg acctgacgaa tgccgagttg
      301 ccctggggca ataatcccga cgccccaccc cgcggctggg tgttcgcgcg gcaggcgctg
      361 acctattggt tgggccttgg accggagcaa aagatggcgg cgctcgacgt cgatccgctc
      421 acaaataccg ttggcgatac ggtggtggcg atggtggaaa gcaccttcgc tccggccgag
      481 accaagaatc cggcgaaact gctgccgttc attcggcgtg gcggcaagct gattatttat
      541 cacgggactt ccgaccctgc gattccgccg gcacgctcga tcctgttcta tcagcaactg
      601 acaggcacgc tgcacggcac cgacaagaca gcggcgaacg ttcgcctgtt cctggttccg
      661 ggcatgcaac attgcagcgg cggcatcggg ccggatcggt tcgacacgtt gagcgcgatc
      721 gaggcctgga cggaacaccg caggacgccg gactcgatcg ccgcaagcac gaagccggat
      781 gctgccgtaa tgcaccgctt gccgctgtgc ccgttcccga agcaggcacg ctattccggg
      841 catggcgaga tgaccgatgt cgcgaactgg tcgtgtgcgc cgcccgcacc cgacactgca
      901 agtgccgcgc attccgggcg ggcgggatag cgaaaccagg ttgggaggac ccacaatgaa
      961 gatcgcacgg atcgagacct ttctgttcga ccccggcctc gccaagaacc tgctattttg
     1021 ccgtgtggag accgaatccg gcgtgcacgg ctggggcgaa gcctatgtca ccccaggcaa
     1081 ggaacaggtg atcgagcatc tgttgcaggt catggcgaat tacatgatcg gccgtagtgc
     1141 gcactcgatc cgccatagcg cgcaggtgat tttcgacgat tttgccatgc ggcgcgcctc
     1201 gctggacttg ctgtcggcat ggagcgcgat cgaaatcgcc atgtgggaca tcgttgccaa
     1261 ggcggcggga caaccgctgt acaacctgct cggcggcccg tcgcgcgaac ggatcaaagt
     1321 ctacgccaac ggctgggctt ccggccccgc aacgatcgag gagaacctgg aacgtgcatt
     1381 gaaggtcaag gaagccggct acacggcgct gaaatgggac cccttccccg gcccgtggcg
     1441 caacttcatc caccgcgagg acgaggatca cgtcgttcgt tacgtccgcc gcatgcggga
     1501 aacgcttggc ccggacttcg gtttgctggt cgaggtgcac cgccggctgg cgccgatgca
     1561 tgccgtgcgg atcggccagc gcctcgcgga attcgatatc ggttggtacg aggaaccgtg
     1621 cctgtgcgac aatatcgaac tggtggccga agtgcgccgc gcgctccccg gcgtgccgat
     1681 cgtaacgggt gaagcgattt actcgaagga agcgttcgcc caggcgctga cggcgcgagc
     1741 ggcggatatc ataaatccgg atatttgcaa ttgcggcggg atcagtgcaa tgctggacat
     1801 tgcggcgatg gcgcagcctc atgcggtggc gatggcgccg cataattaca attcgacgtt
     1861 ggtgggactg gcagcgacag tgcagctgtc ggcggtgatc ccgaatttct ggctcgcgga
     1921 gtgtttcatc aatctcaagc cggcgtgcga tgaaattgcg attcagccgc tgaccgtcaa
     1981 ggatagtttc gttgaattac ccaccactcc tgggcatggc atcgatctgg acgtcgcgaa
     2041 gttacgggca aaaccgtatc gcgacatggg ggcgcggacc gggaagtcgt tgcgcagcta
     2101 cacggaggag tttccgcgca agcattacca ggtcgccgcg acccgtaccg ggtactgaaa
     2161 cagccgcaca aaacctggta tgaccgcgaa ccgcagtcca ccggccgatc gactcctgcg
     2221 tgcgccgcgg agtcactgtt ccgcaaacct ggaaggtagc cgaagtctta cgatcgggcg
     2281 gcgacgcaac gatgtgcg
//
LOCUS       DATAVD010001948         9886 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_368913, whole genome shotgun sequence.
ACCESSION   DATAVD010001948 DATAVD010000000
VERSION     DATAVD010001948.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 9886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9886
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368913"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..417)
                     /locus_tag="VHX39_37135"
     CDS             complement(<1..417)
                     /locus_tag="VHX39_37135"
                     /inference="COORDINATES: protein motif:HMM:NF028290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEX3996828.1"
                     /translation="MQSSSHTVWVVLPFVGLLLSIALIPGIAPRFWLRRMGWVAAAWM
                     LAQIPILGVSAWARDAMHALLESYLPFVAVLGGLYVAAGGILLRGGPAGRPWGNTAML
                     GLGAVLALVMGTAGAALVILQPLLRANAHRRRRFHLV"
     gene            468..1100
                     /locus_tag="VHX39_37140"
     CDS             468..1100
                     /locus_tag="VHX39_37140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon monoxide dehydrogenase subunit G"
                     /protein_id="HEX3996829.1"
                     /translation="MDMTGERRIAAPRQAVWDGLNDTDILKASIPGCERLEKTSDNQM
                     KAVAAVKLGPISARFNGAVTLSDIDAPNSYTIMGEGQGGVAGFAKGGAKVFLTDGDDG
                     ATVLKYAVHAQVGGKLAQLGARLIDATAKQMADQFFTKFSGEVERPFVQEAVATAPPP
                     PEVMHPHVAPPSAVSMLDLVPQEPFGLPIAAWIGMAVFTVMVLLWLASIV"
     gene            1121..1996
                     /locus_tag="VHX39_37145"
     CDS             1121..1996
                     /locus_tag="VHX39_37145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEX3996830.1"
                     /translation="MSETAQLLAVHGYIADHELATTVHLALAMQRPLFLEGEPGTGKT
                     EIAKVLASGLNRRLVRLQCYDGMDQSAAAYEWDHARQLMAIRLAEAAGQTDRDELASD
                     IYTRKYLLARPLLSAIDPDLPPAVLLIDELDRADEPFEAFLLELLADFQVTVPELGTM
                     RAKTKPVVVLTSNRTREVHDAIRRRCLYHWVAYPDAPRERAILAAKAPEVPAQLAGQV
                     VAFLQKLRGEDLFKLPGVAETIDWAQALTYLNKTELTAGDVDETLGVLLKYQDDIAKV
                     KGAEAARILTESRVE"
     gene            2226..3416
                     /locus_tag="VHX39_37150"
     CDS             2226..3416
                     /locus_tag="VHX39_37150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEX3996831.1"
                     /translation="MSATTLSSNVMHFARLLRRAGLPVGPAEAIAAQNALTMIDLASK
                     TEARTALRTVMIHRHEHQEVFDQAFALFWRDPSAAEQAAAMALLDAQKKPPERPPPAA
                     RRVAEAFTNPNTPKPKPEDEPPIQDAALTVSDQERLQNMDFEAMSAAEIEDAKKEIRR
                     LTLPLDLRRTRSTRPDPTGPVMDLRRTIRSSLRQGGEILTIARNRRQTRPPPLVVLCD
                     ISGSMGRYAQILLHFLHAVTNHRARVFVFLFGTRLTNVTRQLRARDPEVAFQMVSHAV
                     PDWSGGTRIGEALDRFNKLWARRVLGQGAIVLLITDGLDRDGAIGLGENMDRLHRSSR
                     RLIWLNPLLRWAGFEPKSQGIRAMLPHVDEFRPVHNLASLRALIALLSRPAPRPLSWT
                     PDGA"
     gene            3449..3772
                     /locus_tag="VHX39_37155"
     CDS             3449..3772
                     /locus_tag="VHX39_37155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HEX3996832.1"
                     /translation="MSDHVEDVLSTAAGWRAAGEQVALATVTETWGSSPRPAGSQMAV
                     TKSGRMAGSVSGGCIEGAVAEAAMKTLETGVPQLLDFGVTHERAWEVGLACGGKVKVF
                     VEALS"
     gene            3769..4467
                     /locus_tag="VHX39_37160"
     CDS             3769..4467
                     /locus_tag="VHX39_37160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HEX3996833.1"
                     /translation="MTPQILAALEAAREQKRPVVVATMLPSGEQLLLPDRSASDALNE
                     IARQALISDVSGTHKVGNVDWFLHVYNPPYRIVIVGAVHIAQALVQFSTACGYATTVV
                     DPRRSFASDERFPNVAVSNAWPDEAMDEFRPDARTAVVTLTHDPKLDDPALDRALKSD
                     AFYIGALGSRRTHAARRKRLRELGHSEESMDRIQGPVGLNIEAVTAPEIAASIIAEII
                     AVRRGAPLAAKPRP"
     gene            4464..6122
                     /locus_tag="VHX39_37165"
     CDS             4464..6122
                     /locus_tag="VHX39_37165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding/glycosyltransferase family
                     2 protein"
                     /protein_id="HEX3996834.1"
                     /translation="MKFGAMPLDYARGGIMAHSQRVGATMIRKGALLDDAALAALRAA
                     GRSEVICAILEPGDVPEDIAADRLATPLVAPLIGRSRAATGRVNLVAEVPGLLRVNVP
                     MIDQLNSIDEALTIGTLPDYAVVAPKDLIATIKIIPFSVPGTMLTVAETVARQNGSPL
                     TLHPFHALKVGLVATELPGLKDSTTDKTIAVTEQRISQLTGSLLPPVRCPHDEQSVAR
                     ALEELLAAGADMLLVVGASAVLDRRDVGPAGIVRAGGEIVHFGMPVDPGNLICVGRIG
                     NKPALVLPGCARSPKLNGIDFILTRLFAGLKVTGSDIMRMGVGGLLKEFDNRPLPREK
                     APATPRSGAAPRSAPTIAAIIMAAGRSRRMAPYNKLLVTDPSGKTMIARVVDNVLSSN
                     ARPILVVTGHMAEQIEQVLGGRPVRYVHAPDYAQGLAESLKTGIAAVPPECAGAIVCL
                     GDMPLVTGRMIDRLLAMYDPDEGRSIVLPTFRGKQGNPMIWDRRFFPEILGISGDSGA
                     RFLVGKHAEQVAEVEMADDAVLRDFDTTESLATLPPRLRPEGVR"
     gene            6297..7220
                     /locus_tag="VHX39_37170"
     CDS             6297..7220
                     /locus_tag="VHX39_37170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996835.1"
                     /translation="MPICEADPWRFQYFETVPCPENVLISTEDPDSWTWYPAHRWIYD
                     KLAVALSQGLDAAPHGVMPPSFPVFSKPITNLRGMGTGSRVIASEEDYKTALTAGHFW
                     CTLLTGAHVSSDVALIDGSPQWWRHTTGATTEGGTFDYWHIRAEAMPDIESWCSNWAS
                     SHLRGYTGMANFETIGGRIIEAHLRFADQWPDLYGPGWVKAVIGLYSDQTWNYPDTAR
                     VDGFSVVLFLPHGPHYRHPPRTAVDAVRAMDGVSSVQITFYEDKDPAHHAMPPGGFRV
                     AIVNATTLASGRAGLETLRQAILQASGLSVR"
     gene            7609..8001
                     /locus_tag="VHX39_37175"
     CDS             7609..8001
                     /locus_tag="VHX39_37175"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEX3996836.1"
                     /translation="MRQHLLTALLCLVIPATAGAQSIARGKYLVEGTSLCNDCHTPRD
                     EKGQLVLSKALQGTTLDVQPIHPMPWAAVSPPIAGLPANYTQAQMVTFLQTGKRPDGS
                     MPRPPMPPYRFSRTDARSLTAYLLSLKK"
     gene            7998..8846
                     /locus_tag="VHX39_37180"
     CDS             7998..8846
                     /locus_tag="VHX39_37180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEX3996837.1"
                     /translation="MRTWWLAVVLSLLTAKAPHAAELKIATWNLNWLTSRTAGLPSDV
                     KPRQPEDFDRLRAYAEELNADLVAIEEVDNADTARRLFPPETYSIHMSHDRVRQRVGI
                     VVRRGLSYDVNPDVTAIALDPVAHLRSGVDITLHPGAGSLRVLAVHLKQGCQYLAFGK
                     SPRTVCATLMSQFDIVAQWIAARRDEGMPFLVLGDFNRDLDKNDPFIRTIAAPTPLTR
                     ATEGFSSPCWGHESFIDHILIGGAARAWVTPNTLRVLAYRETDPAWKERLSDHCPVSV
                     RLLVPD"
BASE COUNT         1822 a         3113 c         3129 g         1822 t
ORIGIN      
        1 caccaggtgg aaccgccgcc gccgatgcgc gttggcgcgc aacagcggtt gcaatatgac
       61 cagagccgcg cccgcggtac ccatgaccaa ggccagcaca gcgccaagcc ccagcatcgc
      121 ggtattgccc cagggccgcc ctgcgggccc gccgcgcaac aaaatccccc cggccgccac
      181 gtacaacccg ccaagtaccg cgacgaacgg caaatacgac tcaagcagcg cgtgcatcgc
      241 atcccgcgcc cacgccgaca cgcccaggat ggggatttgc gcgagcatcc aggctgccgc
      301 gacccagccc atgcggcgca gccagaaccg cggcgcgatg ccggggatca gagcgatcga
      361 cagcaacagg ccgacaaatg gcagcacaac ccacaccgta tggctgctcg attgcatcgt
      421 gctgccctca cctttacctt agcctataca gaacaagggc atgaccgatg gatatgacgg
      481 gtgagaggcg catcgccgcg cctcgccagg cggtttggga cggactgaac gacacggaca
      541 ttctgaaggc cagtattccc ggctgcgagc ggcttgagaa gaccagtgac aatcagatga
      601 aggccgtcgc ggcggtcaaa ctcggtccga tttcggcgcg gttcaatggc gccgtaacgt
      661 tgtccgacat cgatgctccg aacagctaca ccatcatggg cgagggccag ggcggtgtcg
      721 ccggttttgc caaaggcggc gccaaagtgt ttctcaccga tggggacgac ggcgccaccg
      781 tgctgaaata cgcggtgcac gcccaggtgg gagggaaatt ggcgcagttg ggggctcggc
      841 tgatcgatgc gacagccaaa cagatggccg atcagttctt caccaaattc tccggcgagg
      901 tcgagcgacc gtttgtccag gaagccgttg ccacggcacc tccgccgcct gaggtgatgc
      961 atccacacgt ggcgccaccg tccgcggtca gcatgctcga ccttgtgccg caggagccgt
     1021 tcggcctgcc gattgcggcc tggatcggca tggccgtgtt tacggtcatg gtgctgctct
     1081 ggctggcgag catcgtttag tggccgcgtt gccggggtcc gtgtcggaga ccgctcagtt
     1141 gctggcggtg cacggctaca ttgccgatca tgaactggcc acgacggtgc acctggcatt
     1201 ggcgatgcag cggccgctgt tcctggaggg cgagccaggc accggcaaga ctgaaatcgc
     1261 caaggtgctg gcgtcggggc tgaaccggcg tctggtgcgg ctgcaatgct acgacggcat
     1321 ggaccagtcc gccgcggcgt acgagtggga tcatgcgcgc cagttgatgg cgatccggct
     1381 ggcagaggcc gccgggcaga cggatcggga cgaactggca tcggatatct ataccaggaa
     1441 atatttgctg gcccgcccgt tgttgtcggc gatcgatccg gatctgccgc ctgccgtgct
     1501 gttgatcgac gagttggatc gcgccgacga gccgttcgag gcgttcctgc tggaattgct
     1561 ggcggatttt caggtgaccg tgccggaact cggcaccatg cgggcgaaga cgaagccggt
     1621 ggtggtgctg acctccaacc gcacgcgcga ggtgcacgat gccattcgcc ggcgctgcct
     1681 gtatcactgg gtcgcttacc cggatgcgcc gcgcgaacgc gcgatcctgg cagcgaaggc
     1741 gcccgaggtg ccggcgcagc tcgccggtca ggtcgttgcg tttctgcaga aattgcgcgg
     1801 cgaggatctg ttcaagttgc caggcgtggc ggaaacgatc gattgggcgc aggcgctgac
     1861 ctatctgaac aagaccgagc tgacggcggg ggatgtggat gagacgttgg gggtgttgtt
     1921 gaagtatcag gacgatattg cgaaggtgaa aggggcggag gcggcgcgga tattgaccga
     1981 gtcgcgggtc gagtgatggg tgaggttgcg gcagtgtggc gtttctttca cgtctgtgcg
     2041 ctccctgacg ttccattaat ctcagagggc gcggagtgca ctgagggcgt ccgggacaaa
     2101 atttcaaaca tcctccgcgt cctctgtgat ctccgcggcc tcggagtttt aacagaccgc
     2161 gatgcgacgc acacgctgat tggttgcgca ccgacccgga cgcacgacct ggttgcacaa
     2221 acctgatgtc cgccaccacc ctctcctcga atgtcatgca tttcgcccgg ctgctgcgcc
     2281 gcgccggcct gcctgtcggg cccgccgaag cgatcgccgc acaaaacgcg ctgaccatga
     2341 tcgacctcgc ctcgaagacc gaggcccgca cggcactccg caccgtcatg atccaccgcc
     2401 acgaacatca ggaggtattc gaccaggcgt ttgcgttgtt ctggcgcgat ccctcggccg
     2461 ccgagcaggc cgctgccatg gccctgctgg acgcgcaaaa gaaaccgccg gaacgcccgc
     2521 cgcctgccgc ccgacgggtg gccgaggcct tcaccaatcc caacaccccg aaaccgaagc
     2581 ccgaagacga accgccgatc caggatgcag cactgaccgt ctccgatcag gaacgcctgc
     2641 aaaacatgga tttcgaggcc atgagcgccg ccgaaatcga ggacgccaaa aaggaaatcc
     2701 gccgcctgac cttgcctttg gatctccgtc gcacccgctc gacgcgaccg gacccgacag
     2761 gaccggtgat ggatctgcgt cggacgatcc gctccagcct gcgccagggc ggcgagatcc
     2821 tgaccatcgc ccgcaaccgc cggcagacaa ggccgcctcc gctggtcgtg ctgtgcgaca
     2881 tctccggctc gatgggccgc tatgcgcaaa tcctgctgca tttcctgcac gcggtgacca
     2941 accatcgcgc ccgcgtcttc gtcttcctgt tcggcacccg gctgaccaac gtcacccgcc
     3001 agttgcgcgc ccgcgatccc gaggtggcgt tccagatggt ttcccacgcc gtccccgact
     3061 ggtccggcgg cacccgtatc ggcgaggccc tggaccgctt caacaagcta tgggcgcgcc
     3121 gcgtgttggg ccagggcgcc atcgtgctgc tgatcaccga cgggctcgac cgcgacggcg
     3181 ccatcggact gggtgagaac atggaccggc tgcatcgatc gtcccgccgg ctgatttggt
     3241 tgaaccccct gttgcgctgg gcggggttcg agccaaaatc acagggtatc cgcgccatgc
     3301 tgccgcacgt ggatgagttt cggccagtcc acaacctcgc cagcctgcgc gcgctgatcg
     3361 cgctgctttc ccgtccggcc cctcgcccgc taagctggac ccccgatggg gcgtaatgac
     3421 ccaatggggc ctatgaaagg atcacaccat gagtgaccat gtcgaagacg ttctgagcac
     3481 cgccgccggc tggcgtgctg ccggagagca ggttgcgctg gcaaccgtca cggaaacctg
     3541 gggcagctcg ccgcgtccgg ccggcagcca gatggcggtg acgaagtcgg gccgcatggc
     3601 cggttcggta tccggcggct gcatcgaagg cgcggtggcc gaggccgcca tgaagaccct
     3661 ggaaaccggc gtgccgcaat tgctcgactt cggcgtgacg catgaacgcg cctgggaagt
     3721 cggcctcgcc tgtggcggca aggtcaaagt cttcgtggag gcgctgtcgt gacaccgcag
     3781 atcctcgccg cgctcgaggc ggcgcgcgag cagaagcgac ccgtcgtggt ggcaaccatg
     3841 ctgccgtccg gcgagcagct tctgctgccg gatcgctccg cgtccgatgc gttgaatgag
     3901 atcgcgcgcc aggcgttgat ctccgacgtc agcggcacgc acaaggtcgg caacgttgac
     3961 tggttcctgc acgtctataa cccgccgtat cgcatcgtca tcgttggcgc tgtgcatatc
     4021 gcgcaggcat tggtgcaatt ttcgacagca tgcggttatg caacgaccgt ggtcgatccg
     4081 cggcgatcgt ttgcatccga cgaacgtttc ccgaatgtcg cggtgtcgaa cgcctggccg
     4141 gacgaggcga tggacgaatt tcggccggac gcgcgcaccg ccgtcgtgac attgacgcac
     4201 gatccgaagc tggacgatcc ggcgctggat cgcgcactga agtcggacgc gttctacatc
     4261 ggtgcgctgg gttctcgccg cacccacgcg gcccggcgca aacgcctgcg cgaactcggt
     4321 cattccgaag aatcaatgga tcgcatacag ggtccggtgg gactgaacat cgaagcggtg
     4381 acggcgccgg aaatcgccgc ctcgatcatt gcggaaatca tcgccgtccg tcgcggcgca
     4441 ccgttggctg ccaaaccccg gccatgaagt ttggcgcgat gccgctggat tacgcccgtg
     4501 gcggcatcat ggcgcacagc caacgcgtgg gcgcaacgat gatccgcaag ggcgcgctgc
     4561 tggacgacgc agcactcgcc gccttgcgcg cggccggccg cagtgaggtg atctgcgcca
     4621 tcctggaacc cggtgacgtg ccggaggata tcgctgccga ccgcctcgcc acgccgttgg
     4681 tggcgccgct gatcggccgg tcacgcgcgg ccaccggacg ggtgaacctg gtagccgagg
     4741 tcccgggatt gttgcgcgtg aacgtgccga tgatcgatca gctcaactcg atcgatgagg
     4801 cactgaccat cggcacgctg cccgattacg ccgtggtggc accgaaggat ctgatcgcga
     4861 cgatcaagat cattccgttc tcggtgccgg gaacgatgct gacggtagcc gagacggtgg
     4921 ctcggcaaaa cggatcgccg ctgaccttgc acccgtttca tgctttgaag gtcggcctgg
     4981 tggccaccga attgccgggc ttgaaagaca gcaccacgga caaaaccatc gcggtaaccg
     5041 agcagcggat cagtcaattg accggctcgc tgctgccgcc ggtgcgttgt ccgcatgacg
     5101 agcaatcggt ggcccgtgca ctggaggagt tgctggcggc gggtgccgat atgctgttgg
     5161 tcgtcggcgc ctcggcggtg ctggaccgcc gcgacgtggg gcctgccggc atcgtgcgcg
     5221 ccggtggaga aatcgtgcat ttcggcatgc cggtcgatcc cggcaatctg atttgcgtag
     5281 gccggatcgg caacaaaccc gctttggtgt tgcccggctg cgcgcgcagc ccgaaactga
     5341 acggcatcga cttcatcctg acccgattgt tcgccggatt gaaagtcacc ggttctgaca
     5401 tcatgcgcat gggagtcggc ggtcttttga aagaattcga caatcggccg ctgccgcgcg
     5461 aaaaagcgcc ggcgacgccg cggtcgggtg cggctccgcg cagcgcgccg accatcgccg
     5521 cgatcatcat ggcagcggga cgctcccgcc gcatggcgcc gtacaacaaa ctgctggtga
     5581 ccgacccgtc cggcaaaacc atgatcgccc gtgtggtgga caatgttttg tcgtcgaacg
     5641 cccgtcccat tctggtcgtg accggccaca tggctgagca aatcgaacag gttctgggtg
     5701 gccgtccggt gcgttacgtg catgcaccgg attacgcgca aggcctcgcc gagagtctga
     5761 aaaccggcat cgccgcggtg ccgccggaat gcgccggagc gatcgtgtgc cttggcgaca
     5821 tgccgctggt caccggacgc atgatcgatc ggttgctggc gatgtacgat cccgacgagg
     5881 gccgctcgat cgtgctgccg acgttccgtg gcaagcaagg caatccgatg atctgggatc
     5941 gccgcttctt cccggagatc ctcgggatat caggagattc gggtgcgcgg ttcctggtcg
     6001 gcaaacacgc cgaacaggtc gccgaagtcg agatggcgga cgatgccgtg ttgcgcgatt
     6061 tcgacaccac cgaaagcctg gccacgctgc cgccgagact gcggccggaa ggcgtgcggt
     6121 aggcgacggc cgttggtcag gtccctcctg gttttcgatg atcaccgcca cggattcgcg
     6181 tcacgcccgt gcaaaagtct tgatcgatgc cagtccggac cgccccgaga ttgacctcgg
     6241 aggaaaaaac ccggattgga ccggagcaac caagccccaa cagacaggcc cgcatcatgc
     6301 ccatctgcga agcagacccc tggcgattcc agtattttga aaccgtcccc tgcccggaga
     6361 atgtgctgat ctcgaccgag gacccggact cctggacctg gtacccggcg catcgctgga
     6421 tttacgacaa gctggccgtc gcactgtcac aaggcctcga tgcggcaccg catggcgtta
     6481 tgccgccgtc attcccggtg ttctcgaagc cgatcaccaa tctgcgcggc atgggaaccg
     6541 gcagccgcgt gattgcctcg gaggaggatt acaaaaccgc gctcaccgcg ggtcactttt
     6601 ggtgcacctt gctgaccggt gctcatgtct cgtccgatgt cgcactgatc gacggcagcc
     6661 cgcaatggtg gcggcacaca acgggcgcca ccaccgaagg cggaacgttc gattattggc
     6721 atattcgcgc cgaggcgatg cccgacatcg agtcctggtg cagcaattgg gcttcgtcgc
     6781 atctgcgcgg ctataccggc atggcgaatt ttgaaaccat cggtggccgc atcatcgaag
     6841 cgcatctgcg tttcgccgat caatggccgg atctttatgg tcccggatgg gtcaaggcgg
     6901 tgatcgggct atattcggac cagacctgga attatcccga cactgcgcgg gtagacgggt
     6961 tcagcgtggt gttgtttctg ccgcacggcc cgcattatcg ccacccaccc cggaccgccg
     7021 ttgacgccgt gcgagccatg gacggcgtgt cgagcgtgca aatcaccttt tatgaagaca
     7081 aggacccggc gcatcatgcc atgcccccgg gcggcttccg ggtggcgatc gtcaatgcga
     7141 caacgctcgc ctccggtcgc gcaggactgg aaacgttgcg gcaggcgatt ttgcaggcgt
     7201 ccgggttatc ggtacgctga gcgaagcgcg gccgggcacg tggcattggt ttatttctgc
     7261 gccacgcctg atcgcctcca ggtaatggta tcccgccgcc ccgaccgcac cgtccccatt
     7321 tgcggtcctt tgcgtttttt gcgttattct tttgcacggt tcgccaccgg atctctgtgg
     7381 ttcccactgg ctttaaccaa ggaaaacgca aagagtcgca aaggcgccgg accgaacctc
     7441 gacagcccga attggcagca gcgcggacgt ggtcatcatt ccgaacggat ggcatcagcc
     7501 ggcgggccgc gaccggtgca tgggcgcgaa cgtcaatttt ccgttgcgac gcattgatgg
     7561 tcccgctaac gaagcagcaa tcaatctcat cgataacaag gggacctcat gcgccaacat
     7621 ctgctgaccg cactgctctg tctcgtcatc ccggccaccg cgggtgcgca atccatcgcg
     7681 cgtggcaaat acctcgtcga aggcaccagc ctgtgcaatg actgccacac gccgcgtgac
     7741 gaaaaaggtc agttggtcct gtcgaaggcc ctccagggca ccactctcga tgtccaaccg
     7801 atccacccca tgccatgggc cgcggtctcc ccgccgattg ccggcctgcc ggcaaactat
     7861 acccaagcgc aaatggtgac attcctgcaa accggtaaac gcccggacgg gtccatgccg
     7921 cgtccgccga tgccgccgta ccgcttttcc cggacggacg ctcggtcttt gacggcttac
     7981 cttctgtccc tgaaaaaatg agaacctggt ggcttgcggt tgtcctgagc ctgctcacgg
     8041 ccaaggcacc gcacgccgcc gaactgaaga tcgccacctg gaacctgaac tggctcacct
     8101 cccgcacggc cggtctgcca tccgacgtta agccccgcca acccgaggat ttcgaccggc
     8161 tgcgcgccta cgccgaggaa ctgaacgccg acctcgttgc gatcgaggaa gtcgacaatg
     8221 ccgataccgc gcggcgtttg tttccaccgg agacctattc gatccacatg agtcacgacc
     8281 gcgttcgcca acgcgtcggc atcgttgtcc gccgcggtct gagttacgac gtcaatcccg
     8341 acgtgacagc gatcgcgctc gatccggtgg cgcatttacg cagcggcgtc gatatcacgc
     8401 tgcatccggg agcgggttcg ctgcgcgtgc tcgccgtgca cctgaagcaa ggttgccaat
     8461 atctggcgtt tggcaaatcc cctcgcacag tttgcgcgac gctgatgtcg cagttcgata
     8521 tcgtagcgca atggattgcc gcgcgccggg atgagggtat gccgttcctg gtgcttggcg
     8581 acttcaaccg cgacctcgac aagaacgatc cgttcattcg caccatcgcc gcgccgacac
     8641 cgttgacccg cgccaccgag gggttcagca gcccgtgctg gggccacgag tcgttcatcg
     8701 accacattct gatcggcggc gcggcgcggg cctgggttac gccgaatacg ctgcgcgtgc
     8761 tggcttatcg cgaaaccgat ccggcctgga aggagcgcct gtcggatcac tgcccagtgt
     8821 cggtgcggtt gctggtaccg gattgagttt ttggggcggg ttgggttggc agacctatcg
     8881 tcttgaaatg cggcagctgc acagggtctt agcccaacaa cgaagacagc gaataccgtt
     8941 acaccaagca cattctcttc atcatgccga accagacctt gaatatcgga tttcaggtgg
     9001 ttcagcttaa cggaacgttt ttcgacagaa tagtagtcag gagcctggtt tggattgacc
     9061 actcgtgatg tgctggcgcc gggcggactt tatcgccccc caggtatgtc ggtattcagg
     9121 tttcattgag gcataggggc gggtgcggcg cgggtatcga ggacacgccg cacccgctgt
     9181 ttgttggcgg cccgtgggca cagaaaacca cagccagtcg cctgggttgg gtcatgccgg
     9241 aggacgagtc gggtcaaggg atagtggcaa agttaatcac gataatgcct gtccgtatgg
     9301 gacctgagca gaactgcgtg ttgaaatcgg tcgcaagggt ctcccgacca accgaggtgc
     9361 ggatcatatg ggattgacgc tgcgaggttg gctggtgctg atcggagtgc tcggccttgt
     9421 tgctgcgatg gccgcactct ccgggtcctc ggccagacct tatcccgggt gtgacgatgg
     9481 aaaggctacg gctacgctcg ctttgcttta cgataacagg cgtctgttac acgccgttga
     9541 agtgaccggc attcatcacc tgcgggacgg atttggcgca agatattgtt ccgctgtggt
     9601 gaagtggcag aacggaaccg aggccgacgt ggcttacgaa tttgatcgat caagatcagg
     9661 cggtcagaat tatatttcca tgtgggtcaa ttggaatggc gggcagcgtg gtccgtcatt
     9721 ttgaatggaa ttggaaggtc cagcgccagg ctttatttta cggcagcctc acccgatgcc
     9781 ccccgatacc gccttgggtc cccgacaact ttggtaaatc ccgggcacaa tgaactggtc
     9841 gctcgcggta tcggccggct ggaaacagat tcggcaacga tgtcac
//
LOCUS       DATAVD010001949         2986 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1856615, whole genome shotgun sequence.
ACCESSION   DATAVD010001949 DATAVD010000000
VERSION     DATAVD010001949.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2986
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1856615"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..991
                     /locus_tag="VHX39_37185"
     CDS             <1..991
                     /locus_tag="VHX39_37185"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEX3996838.1"
                     /translation="NNPDVDSAAGFKDYIDYVIEAEALGYASAFIVEHHFTGFGQVSA
                     TLNLLTWIGAKTSTLRLGTAVMVLPWHNPVLLAEQAATVDLLSGGRLDFGVGKGYRHN
                     EFASFRIPMEEGQARFEEAIDIITKAWVSNERFDFRGKYWAYDGIIVEPPTIQRPHPP
                     FWQGAGHPDSIRRVAARGHNLLLDQFASIDETVRRFNTYRSAMIENGFGFNPHQVGVA
                     RAFFVADTPAEKDAAIERRMAAQRRLHDISQRPDQNNTASIMAFSDTREANEEATLFG
                     SPDDIIAKIQRLRDQGVEYILLNGGGTSRVNLRRFAREVMPAFKDEAKRQAAE"
     gene            1193..1729
                     /locus_tag="VHX39_37190"
     CDS             1193..1729
                     /locus_tag="VHX39_37190"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HEX3996839.1"
                     /translation="MILSVLERDSGGLPRTSNRPSQRRLSASGLANCERGSVAVEFAL
                     ASVPLMLMVFGFIATAAVFNTWSTMQSNTQYAARLMSTGQISSNNSGAITTTNNSVTT
                     PCSSSMKSTQVEYYACTGLPTWTSFSVTTTENCTTPSVTVTLSTSASTAAIADVEKIF
                     SGNTIVATTVMMKEGTCP"
     gene            1720..2919
                     /locus_tag="VHX39_37195"
     CDS             1720..2919
                     /locus_tag="VHX39_37195"
                     /inference="COORDINATES: protein motif:HMM:NF021493.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadG family pilus assembly protein"
                     /protein_id="HEX3996840.1"
                     /translation="MSLNFRNQSKLAQAFAQIDRRCGRDRGGMATLCAVMIPVLIGLG
                     TLAIDQGYYGYRNLLLKQTTQNAALAAAEELFTYYTSGTNSTIVSTAQTYALNNMPSS
                     KYGTVVTSSNVVLGSWSGTAFTAGGTNPTAVQVTGLNTAANSNAVPLFLGSFFGRPSV
                     DISYTVVASYGSGKAFNTIVINDMSQSFGNQLADQASADQQILNCVKGVLGATSYFGI
                     TFTNGHAFTYQPLTLAQANYTTLTSKVTALTSCSAGGNPNCSSGSNVGSGIYSAIQQF
                     NNATYTGTSKTIVIITDGVPNAKSGETYTTADGVSCGKNCSDTDLQNGTKTQATAAKT
                     AGINISTIYYSGTDTDPSVQSTAKTFLAGLVAGTGTALVAPTTAQLDASYAALCSSIP
                     SVLKLAN"
BASE COUNT          636 a          886 c          896 g          568 t
ORIGIN      
        1 caacaacccg gacgtcgaca gtgcggccgg cttcaaggat tacatcgact atgtgatcga
       61 ggcggaggcg cttggctacg caagtgcgtt catcgtcgag catcacttca ccggatttgg
      121 ccaggtctcg gcgacgttga acctgctgac ctggatcggt gcgaaaacct cgacgcttcg
      181 gcttggcacc gcggtgatgg tgctgccctg gcacaacccg gtcctgctgg ccgagcaggc
      241 ggcaaccgtc gatttgctgt ctggcggccg gttggacttc ggtgtcggca aaggctaccg
      301 gcacaacgaa ttcgccagtt tccgcattcc gatggaggaa ggccaggcgc gcttcgagga
      361 agccatcgac atcattacca aggcctgggt gtccaacgag cggttcgact tccgcggcaa
      421 gtactgggct tacgacggca tcatcgtcga gccgccgacc atccagcgcc cgcatccgcc
      481 attctggcag ggcgcgggcc atcctgattc gatccgccgg gtggcagcgc gcggccataa
      541 cctgctgctg gatcagttcg cctcgatcga tgagacggtg cgccggttca acacctatcg
      601 cagcgcgatg attgagaacg ggtttggctt caatccgcac caggtgggcg tggcgcgggc
      661 gtttttcgtg gccgacacgc cggcggaaaa ggacgctgcg atcgagcgcc gcatggctgc
      721 gcaacgccgg ctgcatgaca tcagccaacg gccggatcag aacaacactg cgtcgatcat
      781 ggctttctcc gacacccgcg aggcgaacga agaagcgact ttgttcggat cgccggacga
      841 tatcatcgcc aagatccaac ggctgcggga tcagggggtg gagtacattt tgctgaacgg
      901 cggcggcacg tcgcgggtca atctgcgccg cttcgcccgg gaagtgatgc ctgcgttcaa
      961 ggatgaggcg aagcgtcagg cggcggaatg acctgggcgt aggcggtagc cgctccacaa
     1021 ccggcaaatg gtcaacgtcg gggaggctgg tcaacggcgc gctgcgatgt atcaattatt
     1081 ggtattattt gattattgat tatatggcct ggccgccgca tggcgaggtg aaactcctgc
     1141 gcaacccctg atcgtctata ggcagggcgg taaatagtgc atgagataaa taatgatact
     1201 ctccgttctg gagcgagatt ccggtgggct gccgcggaca tccaatcgcc cctcccaacg
     1261 ccggctgtcc gccagtggcc tcgcgaactg cgagcgcggc tcggtcgccg tggaattcgc
     1321 cctggcatcc gtgccgctga tgttgatggt gttcggcttt atcgcgacgg ccgcggtgtt
     1381 caacacatgg tcgaccatgc agagcaatac gcaatatgcc gcgcgcctga tgtccacggg
     1441 acagatcagc agcaataact ccggggcgat taccaccacc aataattccg ttacgactcc
     1501 gtgcagttcg tcgatgaaaa gcactcaggt cgaatattac gcctgcaccg gcttgccgac
     1561 ctggacgagc ttcagcgtga caacgaccga gaattgcaca acgcccagtg tgacggtgac
     1621 gctgtcgacc agcgccagca cggcggcgat cgccgatgtc gaaaagatat tttccggcaa
     1681 taccattgtt gcaacgaccg tcatgatgaa ggagggaaca tgtccctgaa tttcagaaat
     1741 caatctaagt tggctcaggc gttcgcccag attgaccggc gctgcgggcg ggaccggggc
     1801 ggcatggcga cgctgtgtgc ggtcatgatc ccggtgttga ttggcctcgg cacgctggcc
     1861 atcgaccaag gctattacgg ctatcgcaat ctgctgctga agcagacgac acagaacgca
     1921 gcgctcgcgg ccgccgagga gttgttcacg tattacacga gcggaacgaa ctccaccatc
     1981 gtgagcacgg cgcaaaccta cgccctgaac aacatgccat cttcgaaata cggaacggtc
     2041 gtgaccagca gcaatgtcgt gctcgggtcc tggagtggca ccgcgttcac tgccggcggg
     2101 accaatccga cagccgtcca ggtgaccggg ttgaacaccg ccgcaaacag caatgcggtg
     2161 ccgctgtttc tcggcagttt cttcggcaga ccgagcgtcg atatttcata cacggtggtc
     2221 gcaagttacg gttccggtaa ggcattcaat acgatcgtga tcaacgacat gtcgcaatcg
     2281 tttgggaacc aactcgccga tcaggcctct gccgaccagc aaattctgaa ttgcgtaaag
     2341 ggagtcctgg gcgcgacttc gtacttcggc attacattca ccaacgggca tgcctttacc
     2401 tatcaaccgc ttacgttggc ccaggcgaat tatacgacgc tgaccagcaa ggtcactgcg
     2461 ctcacctcgt gcagcgccgg tggaaatcca aattgcagct cgggatcgaa cgttgggtcg
     2521 gggatctatt cggccataca gcagttcaac aacgcgacgt acacaggcac gagcaagacg
     2581 atcgtcatca tcaccgacgg tgtgccgaat gccaaatcgg gtgagaccta tacgacggct
     2641 gacggcgtca gctgtggtaa aaattgttcc gacacggacc tgcagaacgg gacaaaaacg
     2701 caggcgacgg cggccaagac tgccggcatc aacatctcga caatctatta ttccgggacc
     2761 gataccgacc catcggttca gtcaacggca aaaacgttcc tggcaggcct ggtcgccggg
     2821 accggcaccg cgctggtggc gccgacgacg gctcagctcg atgcctccta cgccgccttg
     2881 tgctcatcga taccgtccgt gctcaagctg gcaaactgac gcgggccgca catcttaaca
     2941 gcggcgacgc ctgatcctga tcggccggcg tcgacagcgc ggataa
//
LOCUS       DATAVD010001950         2849 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1113324, whole genome shotgun sequence.
ACCESSION   DATAVD010001950 DATAVD010000000
VERSION     DATAVD010001950.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2849
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1113324"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..569
                     /locus_tag="VHX39_37200"
     CDS             <1..569
                     /locus_tag="VHX39_37200"
                     /inference="COORDINATES: protein motif:HMM:NF017532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HEX3996841.1"
                     /translation="EPHSPTHAAWHQDGGYFGLQPQASVCAWVALTDASKEAGCMEQL
                     SFRGEPKMHHHSPMGLPNSINRAGQTIVDAFDETNPAAMALPAGSFSLHHELAVHRSA
                     PNHAAHRRVGIGLNYMPTHVRLDGPVRCRAMLVRGEDRYGHFDLVDPPGAERDPAALA
                     AHQDVSDRYRENYRLQVGRHEQRFTRTG"
     gene            complement(634..771)
                     /locus_tag="VHX39_37205"
     CDS             complement(634..771)
                     /locus_tag="VHX39_37205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996842.1"
                     /translation="MKTIILAAFAALSLGIGMANAQSIMPGVHQAVPAASGFDAGWGN
                     G"
     gene            1140..1532
                     /locus_tag="VHX39_37210"
     CDS             1140..1532
                     /locus_tag="VHX39_37210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996843.1"
                     /translation="MVQRNLCLLALLVSLSACGTRTSESVSPTAGAAPSTTQAVAATS
                     PASIKVTTGDITDQPYRSLGDISVTVSKWTIFDPDPTPAAVDAALQDKAAKLGANAVI
                     LVRYGAVGIGAFSWGKLDGSGRAIAFTK"
     gene            1498..1908
                     /locus_tag="VHX39_37215"
     CDS             1498..1908
                     /locus_tag="VHX39_37215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996844.1"
                     /translation="MEAAVPLPSPSSVVSLRTLLTLLLAGCATAAPPLPPDTTGVNSE
                     HHLSLADFSTQDAAMSCVDIAAERSQITAQLHEANANIQANRTRNQVAGYIGVVAMPL
                     ALLATEGNDADKQALQKAYARQDTLIELGHVKAC"
     gene            complement(2113..2189)
                     /locus_tag="VHX39_37220"
     tRNA            complement(2113..2189)
                     /locus_tag="VHX39_37220"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2153..2155),aa:Ile,seq:cat)
     gene            2350..>2849
                     /locus_tag="VHX39_37225"
     CDS             2350..>2849
                     /locus_tag="VHX39_37225"
                     /inference="COORDINATES: protein motif:HMM:NF015763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HoxN/HupN/NixA family nickel/cobalt transporter"
                     /protein_id="HEX3996845.1"
                     /translation="MLVALLIAANGGAWVWAWQAFADRPALLGTALLAWVFGLRHAVD
                     ADHIAAIDNVVRKLMQEGKRPVDAGFFFSLGHSTVVILASLGIAATTAAMQGRLWAFK
                     AAGAVVGTLVSAVFLLLIAVVNMMILRGVWRGFRHVASGGTLDSAGLEATLAGGGVLV
                     RLCRPL"
BASE COUNT          530 a          957 c          880 g          482 t
ORIGIN      
        1 aggagccgca ttccccgacc catgccgcat ggcaccagga cggcggctat tttggcctgc
       61 agccgcaggc atcggtctgc gcctgggtcg cactgaccga cgccagcaag gaagccggct
      121 gcatggagca actgtcgttc cgcggcgaac ccaaaatgca ccatcattcg ccgatgggcc
      181 tgccgaacag catcaaccgg gcaggccaga ccatcgtcga tgcattcgat gagacgaacc
      241 ccgcagcgat ggcactaccg gcagggtcat tctccctaca tcatgaactc gcggtccacc
      301 gctcggcacc gaaccatgcg gcgcaccggc gggtcgggat cggcctgaac tacatgccga
      361 cacatgtgcg cctggacggt ccggtgcgct gccgggcgat gctggtgcgt ggcgaggacc
      421 gctacggcca tttcgacctg gtcgacccgc caggcgccga acgagacccg gccgcactcg
      481 ccgcgcacca ggacgtcagc gaccgctacc gggagaatta ccgtctacag gtcggacgcc
      541 acgaacaacg gttcacccgc accggctgaa acgcccccgt acagcaaaag ggccagcgtg
      601 tgctggcccc tttcgcaaac ccgaggaacg ggcttaaccg ttgccccagc ccgcatcgaa
      661 cccgctggcg gcgggcaccg cctgatgaac gccgggcatg atactctggg cgttggccat
      721 cccgatgcca aggctgagag cggcgaatgc agcaagaatg atggtcttca tcggaagtct
      781 ccatgtccgg tcgggcgaaa tgtccggctt ggctggtggc ttagatggac caacgcggtc
      841 ctgttgataa tcgcgtttcc tctcattgga tttatgcgca aaacggagaa gtgtccccga
      901 tcggggaacc ggcaccccct gctgccgatc cggaccaccc gacggccccg gcaaccaccg
      961 gaccccgggg caatcggatg aacacgtcac aattcgcgcc acccgccggt ctgcacgcaa
     1021 gctgccggag agccacgatt gttcacccga ttgccctgcc accaaaacct ttggagcttg
     1081 cattcgcatg gcgacattgt tacgtctcca gattggtacg cctacgggag tgaatttcga
     1141 tggttcaaag aaatctgtgt ctgcttgcct tgcttgtttc gctgtccgcc tgcggcaccc
     1201 gcacaagcga gtccgtcagc ccaacggccg gcgccgcacc gtcgacgacg caagccgttg
     1261 cagccacaag ccctgcatcc atcaaggtca ccaccggcga catcaccgat cagccgtatc
     1321 gttcgcttgg agacatttcc gtaactgtct caaaatggac aattttcgac cccgatccga
     1381 ctccggcggc agtcgacgcg gcgctgcagg ataaggccgc caagctcggt gccaacgcag
     1441 tcatcctggt gcgctacggc gccgtgggta tcggagcatt ttcctggggc aagctggatg
     1501 gaagcggccg tgccattgcc ttcaccaagt agcgtggttt cgctccgcac actgctcaca
     1561 cttctcctgg ccggctgcgc gaccgccgcc ccgccgctgc cgcctgatac aaccggtgtg
     1621 aacagcgaac accatctgtc gctcgccgat ttctcgacac aggacgccgc catgtcctgc
     1681 gtcgatatcg ccgccgaacg ctcacagatc acggcacaac tgcacgaggc caatgccaat
     1741 atccaggcca accgcaccag gaaccaggtt gccggttaca taggcgtcgt cgcgatgccg
     1801 ctggccctcc tggcgaccga aggaaatgac gccgacaagc aggccctgca aaaagcctat
     1861 gcccggcagg acacgctcat cgaactgggc cacgtgaaag cctgctgact cgccccggcc
     1921 accgtagctt tcatatcatc ccgacgacgc catcgccgat gacagagcaa acaccatcga
     1981 acgatacgtc caggcgagat ttccatcggc cggctgcatg accgccggaa ccgcgccagc
     2041 cgcaattact gccccaaagg ccgcaggccg gttggtcatg tgcctcaaac gccgctgtca
     2101 ccttgatttc attggtgcgc ccggtaggac tcgaacctac aaccgagcgg ttatgagccg
     2161 ccagctctaa ccaattgagc tacaggcgcg caccacgcct taatgcccgc acccacgacc
     2221 ccgcgtcaac gcggcatcgc ccccacttgc cggaatgcgg aacccccggc attgctgccc
     2281 cccgaacagc gacaaaggca acaccgaccg atgggcgcga cgcatgacag tgcctggagc
     2341 cgtccgagga tgctggttgc gctgctgatc gcggccaatg gcggcgcctg ggtgtgggcg
     2401 tggcaggcgt tcgcggaccg gccggcgtta ctggggacgg cgttgctcgc ctgggtgttc
     2461 gggctgcggc acgcggtgga tgccgaccac atcgcggcga tcgacaacgt ggtgcgcaag
     2521 ctgatgcagg agggcaagcg gccggtcgat gccgggttct tcttctcgct ggggcattcg
     2581 acggtggtga tcctggcgtc gctgggcatc gcggcgacca cggcggcgat gcagggccgg
     2641 ctgtgggcgt tcaaggcggc cggggccgtt gtcggaacgc tggtgtcggc ggtgttcttg
     2701 ctgctgatcg ccgtggtcaa catgatgatc ctgcgcggcg tgtggcgggg gttccgccac
     2761 gtggcctcgg gcgggacgct ggattcggcg gggctggagg cgacgctggc aggcggcggc
     2821 gtgctggttc ggctgtgccg cccgctgtt
//
LOCUS       DATAVD010001951         2646 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2418022, whole genome shotgun sequence.
ACCESSION   DATAVD010001951 DATAVD010000000
VERSION     DATAVD010001951.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2646
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2418022"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..695)
                     /locus_tag="VHX39_37230"
     CDS             complement(<1..695)
                     /locus_tag="VHX39_37230"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF002872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006002 - fructose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent 6-phosphofructokinase"
                     /protein_id="HEX3996846.1"
                     /translation="MNHIAVLTSGGDAPGMNAAIRAVTRSALDQGMTVSGVRQGWQGL
                     VDGQFRLLNARDVGGIIHAGGTFLGSARSAEFREESGRSKALRNLAQRGVDGVVVIGG
                     NGSQTGSYMLSQLGVHVVGIASTIDNDLMGTDITIGCDTAINVTLEAIDHLRTTGSSH
                     NRAFLVETMGRDCCYLAIMAGLAGGAEVISTPENEVPVAEIAQRLHAAYERGKTHAIV
                     VIAEGVKENAAKI"
     gene            924..1697
                     /locus_tag="VHX39_37235"
     CDS             924..1697
                     /locus_tag="VHX39_37235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996847.1"
                     /translation="MDTTPAFSFATCCSAIAGDMAKALAERHGEPPEQKFARLQAAVH
                     MIMGFLPRDVIEAMLASHCVMFHELMLDGVRDRFRARERKEIRAETQGVLALNKAFCG
                     NLGHLKQYQTRSAEGSREGAGVTQAGAEPAPRPADMAVQEQAGQARTSQTPAGDSDGF
                     GPASPAAHDPVMPARNEASDAQRPTTETTAAHRITPAAAAALEAGNAEAFARAMGIEK
                     PSEAFLAAANAPGSPFDPGATATSGRSSPGTLTPDAAPE"
     gene            1899..2459
                     /locus_tag="VHX39_37240"
     CDS             1899..2459
                     /locus_tag="VHX39_37240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996848.1"
                     /translation="MWPLGGRFPPPEGSRWPATLVSGLPPHAVTSNDEIVAIVSNRVL
                     RGHGVAGHWYLESWNGTRRCLSPTLQVTETNRYVGGPFAGPRNSTAVLNVEFDSPGDG
                     EITLGPSRNCFTVPLYDAAPTLIRDMIDALFVWRDVADLLYDRIYPPRGEGGGTIFDR
                     FDLVAITSRFLGGRAVVTRGQLAYFC"
BASE COUNT          490 a          845 c          848 g          463 t
ORIGIN      
        1 atgatcttgg cggcattttc cttgacgccc tcggcgatca ccacgatcgc gtgggtcttg
       61 ccacgctcgt aggccgcatg cagccgttgc gcgatctcgg caaccggaac ctcattctcc
      121 ggtgtcgata tgacttccgc accgccggcg agacccgcca tgatcgccag atagcagcag
      181 tcccgtccca tggtttccac caggaacgcg cggttgtgcg atgaaccggt cgtgcgcaga
      241 tgatcgatcg cttccagcgt cacgttgatg gcggtgtcgc agccgatggt gatgtcggtt
      301 cccatcagat cgttgtcgat ggttgacgcg ataccgacca catgcacccc gagctggctg
      361 agcatgtacg acccggtctg cgagccgttg ccgccaatca ccacgacgcc gtcgacgcct
      421 cgttgggcga ggttgcgcag tgccttggag cggccgctct cctcacggaa ctcggcggag
      481 cgggcgctgc cgagaaacgt tccgccggcg tgaatgatgc cgcccacgtc gcgcgcgttc
      541 agcagccgga actggccgtc gacgaggccc tgccagccct ggcgcacgcc ggagaccgtc
      601 atgccctgat cgagcgcgct gcgcgtgacg gcacggatcg ccgcattcat gccgggtgcg
      661 tcaccaccac tggtaaggac tgcgatgtgg ttcatggatc gcagactatg acggggagtg
      721 cccaggtcgt ccacagcgcc tgggccttgt gaataaaaaa atttgtgcgc cgcaaaagaa
      781 aaatgacgtg gccgcgccgg ccggtcgaac atgggccggg caaccggcct cgggcggacg
      841 gcaacacgtc tgccccggaa ttggtttgac gcgcctgatc gttagaaata ttaactcttc
      901 ccgatcataa ggcgccttca agcatggaca caacgccggc attcagtttc gcaacttgct
      961 gcagcgcaat cgccggcgac atggccaagg cgctcgccga gcgccacggc gaaccgcccg
     1021 agcaaaagtt cgcgcgcctg caggctgccg tccacatgat catgggcttt ctgccgcgcg
     1081 acgtgatcga ggcgatgctc gccagtcatt gcgtcatgtt ccatgaactg atgctcgacg
     1141 gtgtccgcga tcgcttccgc gcccgggagc gcaaggaaat acgcgcggaa acgcaagggg
     1201 tcctcgcgtt gaacaaggcg ttctgcggca atctgggcca tctgaagcag taccagactc
     1261 gctccgcgga aggcagccgc gagggcgcag gcgttactca ggccggtgcc gaaccagcgc
     1321 ctcggccggc tgacatggcc gtgcaggagc aggcgggaca ggccaggaca tcacaaactc
     1381 ctgccgggga ttcggacggg tttgggccgg cgtcgcctgc cgcccacgat ccggtcatgc
     1441 cggcgcggaa cgaggcctcg gacgcgcaaa gaccgacgac ggaaacgact gctgcgcacc
     1501 gtataacccc agcggcggcc gcggcgcttg aagcaggcaa cgcagaggct ttcgcccggg
     1561 ccatgggcat cgagaagccg agcgaggcgt tcctcgccgc tgccaatgct ccagggagcc
     1621 cgttcgatcc cggtgcgacg gcgacaagcg gacgttcgtc gccaggaacg ttgacgccag
     1681 acgcagcgcc tgagtagcaa gcacagcgga caacaacgat cccgtggcag gcgtgcaccg
     1741 acctggcgga tgcggcgaca tttcgcacgc aatacgggca ggcggttcaa accaccaacc
     1801 gcttgctgct cgcgccggac taccgcgctc ggagcccatg ggagtatgtc aggcgcgatt
     1861 ggctgaagcc tgatgaggtc gatcgccggt gcaagcaaat gtggccactt ggcggccggt
     1921 tcccaccacc cgagggaagc cgttggccgg caactctggt gtccgggttg ccgccgcacg
     1981 ccgtcacgag caacgacgag attgtcgcaa ttgtcagcaa cagggtgttg cgcggacatg
     2041 gtgtggctgg gcactggtat ctggagtcct ggaatgggac ccgccgctgt ctgagtccaa
     2101 cgctgcaggt cacggaaacc aaccgctatg tcggtggacc cttcgccggg cctcgtaatt
     2161 ccacggcagt cctcaatgtc gaattcgaca gcccaggcga cggagaaatc accctcggcc
     2221 catcgcgtaa ttgctttacc gttccgctgt acgatgcggc gccgactctg atccgcgaca
     2281 tgatcgacgc cctcttcgtt tggcgcgacg tcgctgacct tttgtacgat cggatttatc
     2341 cgcccagggg tgaaggtgga ggcacaatct tcgaccgttt cgacctggtt gctataacgt
     2401 cccgattcct cggcggccgc gcggttgtga caaggggtca actcgcctat ttttgctgag
     2461 aagtcggcgc ggtccagacc aaatccgctc gccgctgagt ttggcgcctc ccttgttgtc
     2521 ctttcggtgt cccggttcgg ccgaagggcg aaagtcagcg caattccgcc agcgcaacta
     2581 cgcggcgaac gaccgcgccg gagatcggcg gggtggccac gtaacgaccg gcatgggtcg
     2641 gaagcg
//
LOCUS       DATAVD010001952         2565 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3534941, whole genome shotgun sequence.
ACCESSION   DATAVD010001952 DATAVD010000000
VERSION     DATAVD010001952.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2565
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3534941"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..345
                     /locus_tag="VHX39_37245"
     CDS             <1..345
                     /locus_tag="VHX39_37245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996849.1"
                     /translation="RSLCAPDEFTEREMSRTWIGARQRFNVPCTVEIEQTAETLHAHV
                     VLDGDVRIEAGDEVMVHNAPTHVEFGERLVVRRIATVVRASLLDRLRARIEGYLELTE
                     LYEVSFSDGRAT"
     gene            342..1433
                     /gene="acsF"
                     /locus_tag="VHX39_37250"
     CDS             342..1433
                     /gene="acsF"
                     /locus_tag="VHX39_37250"
                     /EC_number="1.14.13.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019016003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0048529 - magnesium-protoporphyrin IX
                     monomethyl ester (oxidative) cyclase activity [Evidence
                     IEA];
                     GO_process: GO:0015995 - chlorophyll biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium-protoporphyrin IX monomethyl ester
                     (oxidative) cyclase"
                     /protein_id="HEX3996850.1"
                     /translation="MIPMEGGTQGQLRTSVRGNADSTDLARQDTILSPRFYTTDFDAM
                     DRLDVSLVRSEWDEVIRELRADHNKSHFVKSDEFKNDLESLPPELRKEFKDFLVSSLT
                     AEFSGCVLYAEIKKRIKNEEIQELFGFMSRDEARHAGFINEILKDHGIGVDLSFLARA
                     KKYTYFRPKFIFYATYLSEKIGYARYITIFRQMERHPERQFHPIFRWFERWCNDEFRH
                     GEAFALLMRADPALLRGHNKLWIKFFLLAVFATMYVRDHMRPAFHEALGMHPTDYDRQ
                     VFQITSDISRQVFPVMLDIDNPRFMAGLDRLSRISQGIADARAQGGLVSKLKRAGYAA
                     SAALTLARLYLLPAKPNALPREICLQPAW"
     gene            1446..2525
                     /gene="puhE"
                     /locus_tag="VHX39_37255"
     CDS             1446..2525
                     /gene="puhE"
                     /locus_tag="VHX39_37255"
                     /inference="COORDINATES: protein motif:HMM:NF023711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0015979 - photosynthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative photosynthetic complex assembly protein
                     PuhE"
                     /protein_id="HEX3996851.1"
                     /translation="MASYIVPPVYAAFLWWFSTGAVLLLVGRSRRFGLVRMVSAAGLV
                     AIALAGLVLSANDTSAGAAYMAFTSAILLWAAQEIAFLAGWVTGPRPRHCPDGVRGWK
                     RLGPALEAILYHELTLVACGAVVATLTWNGSNQVALWTFAALWVLRQSAKINLFLGVP
                     VTNDELMPDAVRFLKSYFIRKPVGAFFPLSVTLATAALVIMVQRIVEVAVTPFEVAGL
                     TLVSTLFALGVVEHWFMLLPLPATTLWGWGVRSGFPPEDTAMEQGPTVKNVTALPLRC
                     VTAQASEPGTNASGGLAIQPQLVVLASVRGETAPAKPRQVGARQRLEDQFRQLFIEQH
                     ARSDLATATLGAGTEPPATINGRTP"
BASE COUNT          460 a          804 c          807 g          494 t
ORIGIN      
        1 cgaagccttt gcgcgcctga tgaatttacg gagcgcgaaa tgagcaggac ctggatcggt
       61 gcccgccagc ggttcaacgt gccctgcacg gtggaaatcg agcagaccgc cgagacgctg
      121 catgcccatg ttgtgctcga cggggacgtc cggattgagg ccggcgatga agtcatggtc
      181 cacaacgccc ccacgcatgt cgagttcggc gagcggctcg tggtccgacg gatcgccacg
      241 gtcgtccgcg ccagcctgct ggaccggctg cgcgcgcgga tcgagggcta tctcgaattg
      301 accgaactct atgaagttag tttctcggat gggagggcaa catgatcccg atggaaggtg
      361 gcacccaggg ccagctccgg acgagcgtca ggggcaatgc cgacagcacc gatctggcgc
      421 ggcaggacac catcctcagc ccgcgcttct acaccaccga tttcgatgcg atggaccgcc
      481 tcgacgtcag tctggtgcgg tcggagtggg acgaagtgat cagggagctg cgcgccgatc
      541 acaacaagtc gcacttcgtc aagtcggatg agttcaagaa cgatctcgaa agtcttccgc
      601 ccgagctacg caaggaattc aaggattttc tcgtcagctc cctgacggcc gaattttccg
      661 gctgcgtgct ctacgccgaa atcaagaagc gcatcaagaa cgaggaaatc caggaactgt
      721 tcggcttcat gagccgcgac gaggcccgtc atgccggctt catcaatgag atcctgaagg
      781 atcacggcat cggcgtggat cttagtttcc tcgcccgcgc caagaaatac acctacttca
      841 ggccgaaatt catcttctat gcgacctatc tgtccgagaa gatcggttat gcccggtaca
      901 tcacaatctt ccgacagatg gagcgccacc ccgagcgcca gttccatccg atctttcgct
      961 ggttcgaacg gtggtgcaac gacgagtttc gccacggcga ggcctttgcc cttttgatgc
     1021 gcgccgatcc cgcgctgctg cgcggccaca acaaactctg gatcaaattc ttcctgctcg
     1081 cggtgttcgc cacgatgtat gtccgcgacc acatgcggcc ggcgttccac gaagcgctcg
     1141 gcatgcatcc gaccgactac gacaggcagg tgtttcagat cacctcggac atatccaggc
     1201 aggtatttcc ggtcatgctg gatatcgaca acccacgttt catggccggc ctcgaccggc
     1261 tcagccggat ctcgcaaggg atcgccgacg ccagggccca gggcggcctt gtttcgaagc
     1321 tgaagcgggc ggggtacgca gcctcggcag cgctgacatt ggcgcggctc tatctgctgc
     1381 cggcgaagcc gaacgcattg ccccgcgaaa tctgcctgca accggcgtgg tgaaagagcg
     1441 ggttcatggc ctcctacatc gttccaccgg tctatgcagc cttcctctgg tggttcagca
     1501 ccggagcggt gctgttgctg gtggggcgat cgcggcgttt tggtctcgtt cgcatggtat
     1561 cggcggcggg cctcgtcgcc attgcgctgg cgggtcttgt gctcagcgcc aacgacacga
     1621 gtgccggcgc cgcctatatg gccttcacct cggccatcct gctgtgggcg gcgcaggaga
     1681 tcgcattcct ggcgggctgg gtcaccggtc cgcgtccgcg gcattgcccc gacggcgtcc
     1741 gcggatggaa acgcctcggt cccgcgctgg aggcgatcct ataccatgag cttacgctcg
     1801 tggcctgcgg ggccgtcgtc gccacgctga cgtggaacgg gtcgaaccag gttgcgttgt
     1861 ggaccttcgc ggcgctgtgg gtgctccggc aaagcgccaa gatcaacttg ttccttggcg
     1921 tgcctgtaac caatgatgaa ctgatgccgg acgcggtgcg cttcctgaaa tcgtacttca
     1981 tccggaagcc cgtcggcgcc ttcttcccgc tctcggtgac gctggcgacg gccgcccttg
     2041 tgatcatggt tcagcgaatc gtcgaagtgg ccgtgacgcc gttcgaggtt gccggcctga
     2101 cgctggtctc gacgctgttt gcgctcggcg tagtcgagca ttggttcatg ctgctgccct
     2161 tgccggcgac gacgctgtgg gggtggggcg tgcgttcagg tttcccgccg gaggataccg
     2221 ccatggaaca gggcccaacc gtcaaaaacg ttaccgcgtt gccgctgcgt tgcgtgaccg
     2281 cgcaagcttc agagccgggc acgaatgcgt ccggcgggct cgctattcag ccgcagctcg
     2341 tcgtgctggc gagcgtgcgc ggggagaccg cgccagccaa gccacggcaa gtcggcgcgc
     2401 gccagcgcct ggaagaccag ttccgccagc tattcatcga gcaacacgca agaagcgatc
     2461 tggcgacggc gacgctcggc gcgggcactg agccgccggc aacgattaac gggaggacgc
     2521 catgaactac gaagcctatt tccgccggca actcgatggc cttca
//
LOCUS       DATAVD010001953         3349 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2046264, whole genome shotgun sequence.
ACCESSION   DATAVD010001953 DATAVD010000000
VERSION     DATAVD010001953.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3349
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2046264"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2435
                     /gene="malQ"
                     /locus_tag="VHX39_37260"
     CDS             <1..2435
                     /gene="malQ"
                     /locus_tag="VHX39_37260"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HEX3996852.1"
                     /translation="WAPAGNTLVMILAGDAESDRIAVILHRGPTDIAVALPSPRPERD
                     WQLIADSGVDANPDPDASPSITAPVLIRSTPVEPVDAGVVEIAASVTVTARSVLVLTE
                     QSRQAVPRRAAGLDPVLLDRLSEAAGIAPDWWDVSGRRTRVSDGTRRALLAAMRLPAA
                     TDRDARETLRHLSDERDRRALPLALVSRTGQPGVFRLGLPPGLDRRPLWLSIEREDGE
                     TERIQLKADDGEVVGFTGVDGLPAQAWQVALPALPEGRHRVRRDDTPDAVCHLTVAPA
                     KCFVSDSIRRGAKRFGISAQLYALRRAGDQGVGDFTTLAMLARAAGREQAATIGINPL
                     HMLFPDDRERASPYHPSDRRFLDPIYLDVSGVSVDPASAAADVVAWSEVWALKRAALE
                     QQFVAFTAAEAADPQMATDFQQFIDLGGIELQRFATFQAIAETRPGENWHGWPAGLHA
                     PDGRDVETFAREHAGRVRFHQYLQFQADRQLAAAASSGLELGLYRDLAVGAAPDGAEA
                     WARSDDLATGAWVGAPPDPFSPEGQNWHLPPPLPQRFALDGFASFAGLVASNMRHAGV
                     LRIDHAMGLTRLFWIPDGGTGADGAYVAYPFADLLGQLALESSRARCMVVGEDLGTVP
                     EGFRAVMTENDILSYRVLFLEREGVNFKPAASYPARAVACVSTHDLPPLAGWWEGADL
                     EERAAVGLIDDLPQAEASRAQERGALVDALVDEGCLAESEFDALAAADIMAGAHEFIA
                     TTPADLVLIQAEDLAGLRVGVNLPGTDRERPNWRLRVPLVVDALLSGDAGQALLKPMR
                     DNGRGLAPTRRD"
     gene            3081..3260
                     /locus_tag="VHX39_37265"
     CDS             3081..3260
                     /locus_tag="VHX39_37265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEX3996853.1"
                     /translation="MLTFRNNLRALIKDERGVTAMEYGLIAALVAVVIIGSVTTMGTS
                     LSTTFKAVAAALPAG"
BASE COUNT          606 a          961 c         1101 g          681 t
ORIGIN      
        1 ggtgggcgcc ggccggcaat acgttggtga tgatcctggc gggtgacgcc gagagcgatc
       61 gcatcgccgt gattttacat cgcgggccga cagatattgc ggtggccctg ccgtcgccga
      121 ggccagagcg tgactggcaa ctgatcgcag atagcggcgt tgacgcaaac ccggaccccg
      181 atgcgtcacc gtctattacc gccccggtgc ttattcgatc gacgccagtc gaaccggttg
      241 acgccggtgt tgtcgaaatc gccgcttccg ttacggttac ggcccgttcg gttctggtac
      301 tgaccgagca gtcccgccag gccgtccctc ggcgcgctgc agggctcgac ccggtgctgc
      361 tcgatcgcct gtccgaggct gccggcatcg cgccggattg gtgggatgtg tccggccggc
      421 gaacccgcgt cagcgacggt acgcggcgcg cactgttggc cgccatgcgg cttcccgctg
      481 cgaccgaccg tgacgcccgt gaaacgttac ggcatctaag cgacgagcgg gatcggcgcg
      541 cgctgccgct tgccctggtc tcgcgcaccg gccaacccgg cgtgtttcgt ctgggcttgc
      601 cgcccggcct cgacaggcgt ccgctttggc tgagcatcga acgtgaagac ggcgaaaccg
      661 agcggatcca gcttaaggcc gacgacggcg aagtggttgg gtttaccggc gtcgatggat
      721 tgcccgctca ggcctggcag gtcgcgttac ctgcgctgcc ggaggggagg catcgcgtcc
      781 gccgtgacga tacgccggac gcggtctgtc atttgactgt ggcgccggcc aaatgtttcg
      841 tgtccgattc gatcaggcgc ggtgccaaac gcttcgggat ttccgcgcaa ctgtatgcct
      901 tgcggcgagc aggcgatcag ggcgtcggcg attttaccac gttggccatg ctcgcgcggg
      961 cggcgggcag ggaacaagcc gccacgatcg gcatcaaccc gctccatatg ctgtttcccg
     1021 atgaccgtga gcgggcgagc ccgtaccatc cgtcggatcg gcggtttctc gacccgatct
     1081 atctcgatgt cagcggtgtc agcgttgatc ccgcctccgc ggcggccgat gtcgttgcct
     1141 ggtcagaagt atgggctttg aagcgcgcgg cgctggaaca gcaattcgtt gcgtttaccg
     1201 cggccgaggc tgctgatcca caaatggcaa cggactttca acagttcatc gacctgggag
     1261 gtatcgagct gcaacggttc gcgacgttcc aggcgatagc cgagacaagg ccaggcgaaa
     1321 actggcacgg atggcccgct gggctgcatg caccagatgg tcgcgacgtc gaaacattcg
     1381 cacgtgagca cgccgggcgt gtgcggtttc accagtatct gcaatttcag gctgaccggc
     1441 agcttgccgc cgccgcgtcc tccggcctcg aactgggctt gtatcgcgac cttgcggtcg
     1501 gggcagcgcc tgatggcgcc gaagcatggg ctcgatcgga cgacctcgcg acgggcgcct
     1561 gggtcggtgc gccgcccgat ccattttcac ccgaagggca gaattggcac ttgcctccac
     1621 cgctgccgca gcgatttgcg ctggatggct tcgcatcatt tgccgggttg gtcgcatcga
     1681 atatgcgcca tgccggcgtg ctgcggattg accacgcgat gggcctgacc cggctgtttt
     1741 ggatccccga tggcgggacc ggtgcggacg gcgcttacgt tgcgtatccg tttgcggatt
     1801 tgttgggcca gttggctctg gaaagttcgc gagcccggtg catggtggtt ggtgaggatc
     1861 tcggcacggt accagagggt ttccgcgccg ttatgaccga aaacgacatc ctcagttatc
     1921 gtgtgctgtt tctcgaacgc gaaggtgtga attttaaacc tgcagcgtca tatcccgcgc
     1981 gagcggtcgc ttgcgtgtca acgcacgacc tgccaccgct tgccggttgg tgggagggtg
     2041 cggatctcga ggaacgcgcg gcagttgggc tgatcgatga tcttccacag gccgaggcaa
     2101 gccgggcgca ggagcgcggc gctctggtgg acgcattggt cgacgaggga tgccttgctg
     2161 agtcggagtt tgatgcgctt gctgccgccg acatcatggc cggcgcgcac gaatttatcg
     2221 caacgacgcc ggctgatctt gtgctgatac aggcagaaga tctggcggga ttgcgggttg
     2281 gcgtgaattt gccgggcacg gatcgcgaac ggccaaactg gcggctgaga gtgccattgg
     2341 tggtcgatgc gttgttgagc ggggatgcag gccaggcact gttgaagccg atgcgtgaca
     2401 atggccgtgg gctcgcgcca acgcgccggg actgaactga tggcaggacc cggagcggta
     2461 aaatatatcg cttaattatc gaaccaaatt gcgacgggta ttgatacgaa tgtagttatg
     2521 gcggtttttt tcgcgtttgg ctgcatagga cgcggctgtg ctttgagccg ataggttggc
     2581 ctgattgctc tgcgatggca atcgatacgg cgacaaatac caaatggcat gacttccgag
     2641 gtagctcctc agcaaatcgt aaccttctgt gggagactgg cactggttgc caaggatccc
     2701 ggcgttcgct ggaatgcacc agtaaggttg gcacggcgcg gccaatgcga gtgagttccg
     2761 ttcgccacag gagtaactga tttcctcgca ttagagtcaa agagccagtt gcatattccg
     2821 gtatgcaaga attttcgcga tcggatgaaa aaacttctgt tccattaacg gttgattaac
     2881 tgtcacggtt taaatctccg aattgaagga ggtgaggggt ttgacctggt atcatccggg
     2941 aatatccacc gaaccttgag acggagccgc gatgcgaagt gtccgtcaaa cggccagcag
     3001 aatgctcagg catgactttc acgaaagtcc gcgcaatggc ccgacaggag cgccacgcgg
     3061 acgcagcaag gacgctgaag atgcttacgt tccgcaacaa ccttcgtgcg ttgatcaagg
     3121 acgaacgagg cgttaccgcg atggagtatg ggcttattgc ggcactcgtc gcggtcgtga
     3181 tcattggctc ggtcaccact atgggcacca gcctgagcac gaccttcaaa gccgtcgcag
     3241 ccgctctgcc ggcaggctag ccgcgtccac ggcgactacg tgagccgaag tgacggcatc
     3301 accatccagg cagggtctcg aaaaacggtg accggaccga ccatgttgc
//
LOCUS       DATAVD010001954         1648 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3535060, whole genome shotgun sequence.
ACCESSION   DATAVD010001954 DATAVD010000000
VERSION     DATAVD010001954.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3535060"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..271)
                     /locus_tag="VHX39_37270"
     CDS             complement(<1..271)
                     /locus_tag="VHX39_37270"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEX3996854.1"
                     /translation="MRRYTMILAVAVVAFTAAAPAMAQNEAQSFPQYMTQDHHMRSSR
                     LIGLPVYNDHGEKFGTIDDIMLPAKGGEVTAVISVGGFLGLGQKLI"
     gene            complement(405..764)
                     /gene="uraH"
                     /locus_tag="VHX39_37275"
     CDS             complement(405..764)
                     /gene="uraH"
                     /locus_tag="VHX39_37275"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019628 - urate catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HEX3996855.1"
                     /translation="MAPDIGGLTVHVLDTALGQPGAGLPLSLFRIGNVVRTQLGVWHT
                     NADGRCDAPLLAGNALLPGTYEIVFNVKAWREKTGGGDIGFYDLIPIRFRVTDPTVHY
                     HIPLLLSPYGYSTYRGS"
     gene            complement(754..1293)
                     /gene="uraD"
                     /locus_tag="VHX39_37280"
     CDS             complement(754..1293)
                     /gene="uraD"
                     /locus_tag="VHX39_37280"
                     /EC_number="4.1.1.97"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0019628 - urate catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline
                     decarboxylase"
                     /protein_id="HEX3996856.1"
                     /translation="MTASASGGAIGLDALNSLNVDAFTEVLGGIFEHSSWIARAAWTA
                     RPFASVPTLHATMVTVVANAGAERQLDLLRAHPELAQTGPLTEASLAEQGGMGLDRLE
                     ADEAAAFDRLNAAYRVRFGFPFIIAVRGQRDRAAILAVLSARLENTPDQERTASLAEV
                     AKIARFRLDDLIVASTNGT"
     gene            complement(1290..>1648)
                     /locus_tag="VHX39_37285"
     CDS             complement(1290..>1648)
                     /locus_tag="VHX39_37285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEX3996857.1"
                     /translation="RLWPAAALPIALAALLTLADSYSPPTNTAEKPISFTEVRVIVDQ
                     RCHICHSAHPKFPAFSEPPKGVMFDTPSQILQYSKQIYAQAVKTHTMPLNNITEITEA
                     ERAALGSWIAAGSRTN"
BASE COUNT          348 a          480 c          495 g          325 t
ORIGIN      
        1 cgatgagctt ttggccaagg cccagaaagc cgccgactga aataaccgcc gtgacctcac
       61 cgcctttcgc cggcagcatg atgtcatcga tagtcccgaa tttctcgcca tggtcgttgt
      121 acacaggcaa tccgatcaac cggctcgaac gcatgtggtg gtcttgcgtc atgtattgcg
      181 gaaaggattg cgcctcattt tgtgccatcg ccggtgcagc tgcggtaaat gccaccaccg
      241 cgacagcgag aatcattgtg taacgtctca tcgcacgctc cattttcgtt ggaggcgccc
      301 agccttgcgg cgaggtcacc ttgagcaccc atgtggtgcc tgcaaggtcg gaccagagag
      361 cggggagaat attacgcgcg cagctatgac aattcggtaa tgtatcagct gcctcgatat
      421 gtcgaatatc cgtaaggcga gagtaacagc ggtatgtgat aatgcaccgt cggatcggtg
      481 acgcggaacc ggatcgggat cagatcgtaa aacccgatat ccccgccgcc ggttttttcc
      541 cgccaggctt tgacgttgaa gacaatctcg taagtacccg gcagcagtgc gttgcctgcc
      601 agcagtggtg catcgcaacg tccgtcagca ttggtgtgcc agacgcccag ttgcgtgcgg
      661 acgacgttac caatacggaa cagggacagt ggcaggccgg cgccaggttg gccaagcgcc
      721 gtgtcgagca cgtgtaccgt caggccgccg atatcaggtg ccattggtgg atgccacgat
      781 cagatcgtcc agtcgaaatc gtgcgatttt cgccacttcg gccagcgatg ccgtgcgttc
      841 ctggtctggt gtattttcaa gacgggcgga caacacagcc aggatcgcag cacgatcgcg
      901 ttggccacga acggcgatga tgaacggaaa gccaaaacgg acgcgataag cggcattgag
      961 tctgtcgaag gctgccgcct catcagcctc caatcggtcc aggcccatgc caccttgctc
     1021 cgccaacgag gcctcggtta gcggtccggt ttgtgccaat tcaggatggg cacgcaacaa
     1081 atccagttga cgttcggccc cggcattagc caccaccgta accatcgtgg catgcagggt
     1141 tggcaccgac gcgaatggcc gcgcagtcca ggcggcgcgg gcaatccacg atgaatgctc
     1201 gaagatgcca ccgagcactt cggtaaatgc atcgacatta agtgagttga gcgcatcgag
     1261 gccgatcgct cccccggatg cagacgcggt caattggtcc tcgaacccgc ggcgatccac
     1321 gatccgagcg ctgcccgctc ggcttcggtg atctcagtga tattattcag cggcatcgta
     1381 tgagtcttca ccgcctgggc gtaaatctgc ttggaatatt gcaggatttg cgagggcgta
     1441 tcgaacatca cgcccttcgg cggttcagag aacgccggaa acttcgggtg cgccgagtgg
     1501 cagatgtgac aacgctgatc cacaataacg cgcacctcgg taaagctgat cggcttctcg
     1561 gccgtgttgg tcggcgggct gtaactgtcg gccagagtga gcagcgccgc cagggcgatg
     1621 ggaagcgcgg cggccggcca caaccgcc
//
LOCUS       DATAVD010001955         1952 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2789737, whole genome shotgun sequence.
ACCESSION   DATAVD010001955 DATAVD010000000
VERSION     DATAVD010001955.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1952
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2789737"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..830
                     /locus_tag="VHX39_37290"
     CDS             <1..830
                     /locus_tag="VHX39_37290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996858.1"
                     /translation="PESAFEGLVGEVTESRYLALMFTMFLAAASPAASPNLRPDIAKI
                     VQDSARVTEADRQASPAYDYSETDKQPDGSTKTWAVRMLLGSPYRILTAVNGEPLDPP
                     QQSRRQQKLKQETARRQRESAGARKRRIGAYQKEQERDRHFITEFVGAFNYSLQGEQE
                     MKGRKVYVVDATPRPGFQPNDHETQVMTGMRGKLWIDEQTHHWVRVQAEVTHPVSIEG
                     FLATVQPGTRFELERAPVGNGVWLPTHYAMAADAKVLSVFNKRDQADETYFDYRQPR"
     gene            932..1081
                     /gene="rpmH"
                     /locus_tag="VHX39_37295"
     CDS             932..1081
                     /gene="rpmH"
                     /locus_tag="VHX39_37295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008589899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEX3996859.1"
                     /translation="MPKRTFQPNNRSRVKKHGFRTRMKTADGRAVISRRRAQGRKKLT
                     VSSER"
     gene            1087..1512
                     /gene="rnpA"
                     /locus_tag="VHX39_37300"
     CDS             1087..1512
                     /gene="rnpA"
                     /locus_tag="VHX39_37300"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEX3996860.1"
                     /translation="MTNDPKSGPPASESGSGFPKSVRLLRPGDFRRVYDHGARYSCPL
                     FAAFSLGQAGGGKAVGFTTPKALGKAVRRNRIRRRMREAVRLELASLNPGWSIVFNPR
                     RKLLDCIFTDLRHEVKRFFIRCGTPPAPVSSESSGATNA"
     gene            1455..1679
                     /gene="yidD"
                     /locus_tag="VHX39_37305"
     CDS             1455..1679
                     /gene="yidD"
                     /locus_tag="VHX39_37305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002474682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEX3996861.1"
                     /translation="MRNAASACLIGILRGYKRMISPLLPSACRFHPTCSDYMREAIEI
                     HGPARGVWLGLKRLSHCHPFHAGGFDPVPR"
     gene            1760..>1952
                     /locus_tag="VHX39_37310"
     CDS             1760..>1952
                     /locus_tag="VHX39_37310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996862.1"
                     /translation="MLLAFGLMGLILFGSNWAYHKMGLIPNEPASATKSTAAPVTSKA
                     MPLPNSAPGSLPGDTTNPGE"
BASE COUNT          414 a          609 c          567 g          362 t
ORIGIN      
        1 gacccgaaag tgcttttgaa ggtttggttg gcgaagtgac tgagagcaga tatcttgcgc
       61 tgatgtttac gatgtttctg gccgctgcct cacctgcggc atcgccgaat ctgcggccgg
      121 atatcgccaa aatcgtacag gattcggccc gtgtcaccga agccgatcgg caagccagcc
      181 cggcatacga ctattccgaa accgacaagc aacctgacgg ttccacgaaa acctgggcgg
      241 tgcgaatgct tcttggttcg ccgtaccgta ttctcaccgc agtgaacgga gagccgctcg
      301 atcccccgca gcagtcgcgc cggcaacaaa agctgaaaca ggaaacagcg cgccgccagc
      361 gggaatcggc tggcgcgcgt aagcggcgga tcggcgcgta ccagaaagaa caggagcgcg
      421 accgccactt catcaccgaa ttcgttggcg ctttcaatta cagcctgcag ggcgaacagg
      481 agatgaaggg gagaaaggtg tacgtggtgg acgcaactcc gcgccctggc ttccagccga
      541 acgatcatga gacgcaggtc atgaccggca tgcggggaaa actctggatc gatgagcaaa
      601 cgcaccactg ggtccgggtt caggccgagg tgacccatcc cgtctccatc gaaggcttcc
      661 ttgcaaccgt gcagccgggc acgcgattcg aactcgaacg cgcgccggta ggcaacggcg
      721 tgtggttgcc cacgcattac gccatggctg ccgacgcgaa ggtgctttcc gtcttcaaca
      781 agcgcgatca ggccgatgaa acgtatttcg attaccgcca gccccgctga gatcgggacc
      841 tcggcatctc cgatgcacgc ctggcgcgct gcggcccgct gattattgag gcagcgggct
      901 ttagtgtata attctagttt cccctactac aatgccgaaa cgcacttttc aaccgaataa
      961 ccgcagccgc gtcaagaagc acggttttcg gacacgcatg aagacggccg atggccgtgc
     1021 tgttatctcg cgccgccgcg cgcagggtcg caagaagctg actgtcagct cggagaggta
     1081 gtccggataa cgaacgaccc caaatcgggc ccgcccgcaa gcgagtccgg atccggcttt
     1141 cccaaaagtg tccggctact ccgtcccggt gatttccgca gagtttacga tcatggcgcg
     1201 cgatattcgt gccctttgtt cgctgcgttc agcctcgggc aggccggagg cggcaaagcc
     1261 gtgggcttca caactcccaa agcgctgggc aaggccgtca ggcggaaccg tattcgccgc
     1321 cgaatgcgcg aggccgtgcg gcttgagctg gcctcattga atccagggtg gtccatcgta
     1381 ttcaatccac ggcgcaagtt gctcgattgc atctttacgg atcttcggca cgaagtaaaa
     1441 cgtttcttta tacgatgcgg aacgccgcca gcgcctgtct catcggaatc ctccggggct
     1501 acaaacgcat gatctcgccg ctgctgccat cggcatgccg gttccatccc acttgctccg
     1561 actacatgcg agaggcgatt gagatccacg gccccgcgcg cggagtctgg ctgggcctga
     1621 agcgcctcag ccactgccat ccattccacg ccggtggctt tgacccggtg ccgcgctgag
     1681 aagagaaaac cgtccagaca tgagttccac ctcccataca cccaaaggcg cgccgaaaga
     1741 aatgtcgacc gagctgcgca tgctgctcgc cttcggcctg atgggactga tcctgttcgg
     1801 atcgaactgg gcctatcaca agatggggct catcccgaat gagccggcgt ccgcgacgaa
     1861 gagtactgcc gctcctgtga catcgaaagc catgccgctt ccgaactcag cgccaggttc
     1921 cctgcctggc gatacaacaa accccggcga aa
//
LOCUS       DATAVD010001956         1533 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1857640, whole genome shotgun sequence.
ACCESSION   DATAVD010001956 DATAVD010000000
VERSION     DATAVD010001956.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1857640"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..434)
                     /locus_tag="VHX39_37315"
                     /pseudo
     CDS             complement(1..434)
                     /locus_tag="VHX39_37315"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
     gene            complement(431..1141)
                     /locus_tag="VHX39_37320"
     CDS             complement(431..1141)
                     /locus_tag="VHX39_37320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEX3996863.1"
                     /translation="MDTASVRVRDVSYAYGAGNLARPVLHDINLTVQRGEIVLLTGPS
                     GSGKTTLLTLIGALRTMQRGSCIVLGEELAQSRERQRVALRRRIGFIFQSHSLLGFLT
                     ARQNVAMALELHSLLTERQRLERADAMLWAVGLGGRGDDRPDTLSGGQRQRVSVARAL
                     VGDPGLILADEPTAALDRQSGGEVVRLLCDLARQRGVPILLVTHDARILDVADRIIGM
                     EDGRIAPPDALMDRPAHP"
     gene            complement(1141..>1533)
                     /locus_tag="VHX39_37325"
     CDS             complement(1141..>1533)
                     /locus_tag="VHX39_37325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007005295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEX3996864.1"
                     /translation="WEKATPIGFIFAFGSLMGLIVGMVIVYQILFSDIASHLREFATL
                     KAIGYSNGYLNRVVLSAALLLAVLGFVPGLALSAVLYEVVNKGTYLRLEMNASRAVWV
                     FVLIFATCAASGLLAMRKLRDANPADMF"
BASE COUNT          304 a          526 c          466 g          237 t
ORIGIN      
        1 gacgaaacat tgatcacgac cccgctgcac tggcgccgca tcacgggcag gacatgtcgg
       61 gtcgccgcga taaggccgaa cacgttggtg cggaactgag cctcgatctc agccgcactg
      121 tgcccttcca gcggacccat ctaggcatag ccggcgttgt tgaccagcgc atcgatccgg
      181 ccgaaccggc cgacgacagc ggcgacagtg cgagcgatgc tgtcctccgc ggtcacatcc
      241 aacgcaaaga cggcgagatt gccggcttcg ggccacgccg cggctttgcc gggggaacgc
      301 atggtagcgg ccacgttcca gcccctcgcg gcgaacaact cgacggtggc acgaccgata
      361 ccgctcgacg caccggtgat caggaccgtg ctggtcataa tggcctccgt tgcgtcgaca
      421 tcggatgatg tcatggatga gcgggccgat ccatcagcgc atcggggggt gcaatccggc
      481 cgtcctccat gccgatgatc ctgtctgcaa catcgagaat tcgcgcatca tgcgtcacca
      541 gcaggatcgg caccccgcgc tggcgtgcca gatcgcacag caggcggacc acctctcccc
      601 ccgactggcg gtcgagcgcg gcggtcggtt catcggccag gatcaacccg ggatcaccca
      661 ccagcgcgcg cgccacggag acgcgctggc gttgcccgcc cgagagcgtg tccggccggt
      721 cgtcaccccg cccccccagt ccgaccgccc acagcatggc atccgcccgc tccagccgct
      781 gccgttcggt gagcagcgag tggagttcca gcgccatggc gacattctgc cgtgcggtga
      841 gaaaacccag cagactatgg ctttggaaaa tgaagccgat gcgtcgtcgc aacgcgaccc
      901 gctgacgttc ccgggactgg gcgagttcct cacccagcac gatgcaactg ccgcgctgca
      961 tcgtgcgcag cgcgccgatc agggtcagca gcgtggtctt gccgctgccg gaagggcctg
     1021 tcagcagcac gatctctccc cgctgcacgg tcaggttgat atcgtgcagc accggacgag
     1081 ccagattgcc ggccccgtag gcatacgaga catcccgaac ccgcacggag gctgtgtcca
     1141 tcagaacata tcagccgggt tggcatcgcg cagcttgcgc atcgccagca gcccggacgc
     1201 cgcgcaggtt gcgaagatca gcacgaacac ccacaccgcg cgggacgcat tcatctccag
     1261 ccgcaggtat gtgcctttgt tcacgacctc atacagcacc gcggacaatg cgagaccggg
     1321 gacgaaacca agtaccgcca gcaacagcgc cgcgctgagc acgacgcgat tcagataacc
     1381 attggagtag ccgatcgcct tcagcgtggc gaattccctg agatgactgg ctatgtcgct
     1441 gaacaggatc tgatagacga tcaccatgcc gacgatcagg cccatgaggc tgccaaaggc
     1501 aaagatgaag ccgatcggcg tcgccttctc cca
//
LOCUS       DATAVD010001957         2545 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_557093, whole genome shotgun sequence.
ACCESSION   DATAVD010001957 DATAVD010000000
VERSION     DATAVD010001957.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2545
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_557093"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2312)
                     /locus_tag="VHX39_37330"
     CDS             complement(<1..2312)
                     /locus_tag="VHX39_37330"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3996865.1"
                     /translation="MLLHCDHAIVTADGHLLIQGWAISRAGIDRVAVVVDGKPMGLAK
                     YGLQRPDLPGDQEGIPLPLGFEFAASIPGFAGGSYQVRIIATNRAGDQSEVTITAAAP
                     APASFMFELDGPATRDGVMIQPVTGRLVIEGWALARDGMAGIDVEMDGTLLGHAHYGM
                     ARPDVGAVFPDWQGAARSGYVFHCPPRALPDGDHVIRLIARSETGGSHVHTFHITVNK
                     TDDPEAAASIRRRIKWVEQKTTNEILQQLNWRPVFHLIVTGHPVGVTAPAGNDNSWEL
                     TLRSILEQAWPLWQVTVVTSGAADADAAQSAIRRLAPDRAARFVVTTPADATAWQAPF
                     SATIAVPLIRRRKRGRQSGDLPSGLPQGGTPAPVVFPGTLPQASARMAGVAGPSAKFT
                     PGGDTQEGEGELILLLAAGDELGRDALSEFAVASGMHTGADCFYADEFRLPPGTTRPE
                     AFFKPDFSPALLLSTNYIGRPLVVRPSLLATVGTTPNTLMRDGFHDLALRCTEAATQT
                     YHVTELLSRTDRGFAVNPENGVAALNNAMTRRAIDAEVLPGMLPETFRVRQTSPATGK
                     VSIIIPTCAARGVVETCLTTLRAETAYRNFEIVCIDNIPDTEVTYKKFVRKHADKIVA
                     MPPPFNWSRFNNAAVAASDGEYLLFLNDDIEIIQPAWLDAMLEAAAWSGIGIVGARLL
                     YPDRSIQHAGMFLGDGMGRHAFRHADQHDHGYFGLAQTTREVSAVTGACMLVRREIFD
                     ALGRFDESHDVINNDLDFCLRAQRAGWRTI"
BASE COUNT          503 a          786 c          778 g          478 t
ORIGIN      
        1 tagatcgtgc gccatccggc gcgctgcgcc cttaagcaga aatcaagatc gttgttgatg
       61 acgtcatgcg attcgtcgaa ccggccgagt gcgtcgaaaa tctcgcgacg gaccaacatg
      121 caggcgccgg tcaccgcact cacctcgcgt gttgtctggg ccagaccgaa atagccgtgg
      181 tcatgttgat cggcatgacg aaaggcgtgg cgccccatgc cgtcccccag aaacataccg
      241 gcgtgctgga tcgagcgatc cggatagagc agacgcgcgc caacgatacc gatcccagac
      301 cacgctgctg cttccagcat cgcgtccaac caggccggtt gaatgatttc gatgtcgtcg
      361 ttcagaaata gcagatactc gccatccgag gcggcgacgg cggcattgtt gaagcgtgac
      421 caattgaatg gcggcggcat cgcgacaatt ttatcggcgt gcttacgaac gaacttctta
      481 taggtaactt cggtatccgg aatgttgtcg atgcagacga tctcgaaatt ccggtaggcg
      541 gtttcggcgc gcaacgttgt taaacaggtc tcgacaacac ctcgcgccgc gcaggtcgga
      601 atgatgatgg acaccttgcc ggtagcggga ctggtttgtc gcacgcggaa tgtttcgggc
      661 agcatccccg gcaggacttc ggcgtcgatt gctcgccgtg tcatggcatt gttcaaggca
      721 gcgacaccgt tctcaggatt gacggcaaag ccgcgatcgg tgcggctcaa cagttcggtg
      781 acgtgatagg tttgtgttgc cgcttccgtg cagcgcaacg ctaggtcatg gaatccgtca
      841 cgcatcaacg tgtttggtgt ggtgccgaca gtcgccagca agctcgggcg taccaccaac
      901 ggacggccga tataatttgt cgataacagc aaggccggag aaaaatccgg cttgaaaaaa
      961 gcctcaggcc gcgtggtgcc gggtggcagg cgaaactcgt cagcgtagaa acaatcggcg
     1021 cctgtgtgca taccgctggc aactgcgaac tcgctcaatg catcgcgtcc gagttcgtca
     1081 cccgccgcga gcaggaggat cagctcgccc tcaccttcct gcgtgtcgcc tcctggcgtg
     1141 aacttcgcac tcggacctgc tacgcctgcc atcctcgccg aagcctgcgg caaagtgcct
     1201 ggaaacacta ccggcgccgg cgtgcctccc tgtggcaagc cgctcggaag atcgccgctt
     1261 tggcgacctc tcttgcggcg tcggatgagc ggcaccgcga tcgtggctga aaacggagcc
     1321 tgccaggcag tggcgtcggc cggggtggtc accacaaatc gcgccgcccg atcaggggcc
     1381 agccgccgga tcgcgctctg tgcggcatcg gcatcagctg caccggacgt aacgacagtc
     1441 acctgccata acggccacgc ctgttccagg atcgaacgca gcgtcaattc ccaggagttg
     1501 tcattgccgg caggggccgt caccccaacg ggatgcccgg tgacgatcaa atgaaatacc
     1561 ggccgccagt tgagttgttg cagaatttcg ttggtggttt tttgttcgac ccatttgatg
     1621 cggcgacgaa ttgacgccgc cgcctccgga tcgtcggtct tgttgaccgt tatgtggaac
     1681 gtatgcacat gcgacccacc ggtctccgag cgagcaataa gccggatgac gtggtcacca
     1741 tccggcaagg ctcgcggcgg gcaatggaag acgtagccac tacgggcggc accctgccag
     1801 tccggaaata ctgcgccgac gtcaggcctc gccatgccgt aatgcgcatg accaagcagc
     1861 gtgccatcca tctcgacatc gatgcccgcc atgccgtcac gcgccagcgc ccagccctcg
     1921 atcaccagac gaccggtgac cggttggatc atgacgccgt cccgcgtggc cggcccgtcg
     1981 agttcaaaca taaaagaagc cggtgcagga gcggctgcgg tgatcgtcac ctcactttgg
     2041 tcgccggcac ggttcgtcgc gataattcgc acctggtagg agccgccggc gaacccgggg
     2101 attgatgcgg caaattcaaa gccgagggga agtggtatgc cttcctgatc acccgggaga
     2161 tccgggcgtt gcaggccata cttcgcgagg cccatcggct tgccatcgac cacgaccgcg
     2221 acgcggtcga tgccggcccg ggaaattgcc cacccttgga tgagcaggtg gccatctgcg
     2281 gtgacgatcg cgtgatcgca atgcaacagc acagaattgt cagggtccga cgctgcggat
     2341 tccggtacgg ccggctccgt ggcatcagat ccggcgcccg gcggcgctct gaaattgcgt
     2401 tgcgaaacct ctcttccggc caggcccggc ggctgcgttt cggtcgaaag aactgagccc
     2461 cgtgccaacg ggattaccgc cgtatggctt gcaccattct ggcacaccac ctgggcgctc
     2521 acgcttgtgg cacgacgcac ggatg
//
LOCUS       DATAVD010001958         2356 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1484552, whole genome shotgun sequence.
ACCESSION   DATAVD010001958 DATAVD010000000
VERSION     DATAVD010001958.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2356
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1484552"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..732
                     /locus_tag="VHX39_37335"
     CDS             <1..732
                     /locus_tag="VHX39_37335"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HEX3996866.1"
                     /translation="VAALNEFQPAPDFVVISGDLADTPTSEEYDYLKRLLAPLKLPFA
                     GIPGNHDSRELMRTAFPQADYAMASGPLNQRVEIAGLDLVLLDSSVPGKPYGELEAPT
                     LQWLEAALESSSDRPTLLFLHHPPFRTGIWHMDRQNLLNAGDLAPIVRRYPCVQLIAT
                     GHVHRATFTMFAGVPTTICPAPNHAVDLDLDRLRQPSFKVEPPSFHLHSWFPGEGFGS
                     VVTHQVPIGHFDGPHPFFGPDGKLL"
     gene            complement(772..1896)
                     /locus_tag="VHX39_37340"
     CDS             complement(772..1896)
                     /locus_tag="VHX39_37340"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3996867.1"
                     /translation="MEKPVSNRQGERPMTTRRNFLKGAVAAGIAFCGCGVGDAARAQP
                     RPRLPVKIGGKRIFTVDVHSHCYFHEALNLMGDAADRVLPPVKGVPEHFIVIEQRLKE
                     MDAMAIDMEILSINPFWYGKDRDTAAAIVKVQNDKLAELCASRPERFGAFASLSLQFP
                     DLAVQQLEAAVKKQGLRGAAIGASVSGEDFSDPKFHPVWAKADELGAVLFVHPQSTPE
                     LAKRFKGNGWLSNTIGNPLDTTIALQHLIFEGTLDRFPGLKVLAAHGGGFLPSYAARG
                     DHACFVSPQNCNPNITLKKKPSEYLKQLHFDAMVFTPEGLRHLVAQVGASQIMLGTDH
                     PIPWEQHPVDHVFATTTLTDKQKAAILGGNATRLFGLKQA"
     gene            2042..>2356
                     /locus_tag="VHX39_37345"
     CDS             2042..>2356
                     /locus_tag="VHX39_37345"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEX3996868.1"
                     /translation="MRLIHSLAAAFALLVGSNAVAQTAYPARPIKMIVPLAAASAVDV
                     AARIVTQKMADNMGQQIVIINQAGASGLIGAEQLARSAPDGYTIGGFNDSVMTMVPNL
                     HAK"
BASE COUNT          416 a          730 c          739 g          471 t
ORIGIN      
        1 gtcgccgcct tgaatgaatt ccagccggca cccgacttcg tggtgatctc aggtgatctc
       61 gccgacacgc cgacgtcgga agaatacgac tatctcaaac gtctgctggc gccgctcaag
      121 ctgccgtttg ccggcattcc cggcaatcac gactcgcggg agctgatgcg cacggcattt
      181 ccacaggcag actatgccat ggcatcgggg ccgctcaacc agcgcgtcga gatcgccggg
      241 ctcgatctgg tgctgctcga ttccagcgta cccggcaaac cctatggtga actcgaggcg
      301 ccgaccctgc aatggctgga ggcggcgctt gaatcgtctt ctgaccggcc gacgctgcta
      361 ttcctgcatc atccgccgtt caggacgggc atctggcata tggatcgcca gaacctgctc
      421 aatgccggcg atcttgcccc gatcgtgcgg cgttatccgt gcgtacaatt aatcgccact
      481 gggcacgtcc atcgcgccac gttcacgatg tttgcgggcg tgccgaccac gatctgtcca
      541 gcgcccaatc acgccgtcga cctcgacctc gatcggttgc ggcagccgtc gttcaaggtc
      601 gaaccaccgt cgtttcacct ccacagctgg tttccagggg agggattcgg cagcgtcgtc
      661 acgcaccagg ttccgatcgg tcatttcgat gggccgcacc cgtttttcgg gccggacggg
      721 aagttgctgt aagaggactt catcgcgcgg cgttcgactc ggcgctacgc cttaagcttg
      781 cttcaatcca aacagccgcg tcgcgttgcc accgagaatg gccgctttct gcttgtcggt
      841 cagggtggtg gtggcgaaga cgtggtcgac cgggtgttgt tcccagggga tcggatggtc
      901 ggtgccgagc atgatctggc tggcaccgac ttgcgccacc agatgacgca ggccttccgg
      961 ggtgaacacc atggcgtcga aatggagctg tttcagatat tccgatggct tctttttcag
     1021 cgtgatgttg ggattgcagt tttgcggcga tacgaagcag gcgtggtcgc cgcgcgccgc
     1081 ataggacggc aggaagccgc cgccatgcgc ggccaggact ttcaggccgg ggaagcggtc
     1141 gagcgtgcct tcgaaaatca ggtgctgcag ggcaatcgtg gtatcgagcg ggttgccgat
     1201 cgtattcgac agccagccat tgcccttgaa gcgcttggct aattccggcg tgctctgcgg
     1261 atggacgaac agaacggcac cgagctcgtc ggccttggcc cagaccggat ggaacttggg
     1321 gtcggagaaa tcctccccgg acacgctggc gccgatcgcg gcaccgcgca gtccctgctt
     1381 cttgactgcg gcctccagtt gctggaccgc aaggtcggga aattgcaggc tcaatgaggc
     1441 gaacgcgccg aatcgttccg gccgtgacgc gcacagttcg gccagcttgt cgttttgcac
     1501 cttgacgatc gctgccgcgg tgtcgcggtc cttgccgtac cagaacggat tgatcgacag
     1561 gatctccatg tcgatcgcca tggcgtccat ttccttgagg cgttgctcga tgacgatgaa
     1621 gtgctccggt acgcccttca ccggcggcag caccctgtct gccgcatccc ccatcaggtt
     1681 gagggcctca tggaaatagc aatgtgaatg aacatcgacg gtgaagatac gtttgccacc
     1741 aatcttgacc ggcaggcgcg gtcttggctg ggcacgggcg gcgtccccca cgccgcagcc
     1801 gcaaaaggcg atcccggcgg ccaccgcgcc cttcaggaag tttctgcggg tggtcattgg
     1861 tcgttccccc tggcggttgg aaaccggctt ttccactcga ccggatgatc gaaccgccgg
     1921 cctgatcccg attttctttg cctggcacat tgccaagccg ggagcgggag ggcaatcatt
     1981 ctccaggaga tcgcgaccgc ttgcccggaa acgtgatcca attcgcacgg ggaatttcgg
     2041 aatgcgcctg attcattcgc tggcggcggc gtttgcgctg ctggtcggtt ccaacgcggt
     2101 cgcgcagacc gcctatcccg cacggccgat caaaatgatc gtgcctttgg cggcggcgag
     2161 cgccgtggat gtcgcggcgc ggatcgtgac gcagaagatg gccgacaata tgggccagca
     2221 gatcgtcatc atcaaccagg ccggcgcatc cgggctgatc ggggccgagc agctcgcgag
     2281 atcggcgccg gacggctaca cgatcggcgg gttcaacgac agcgtcatga ccatggtgcc
     2341 caacctgcac gccaag
//
LOCUS       DATAVD010001959         2823 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2230954, whole genome shotgun sequence.
ACCESSION   DATAVD010001959 DATAVD010000000
VERSION     DATAVD010001959.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2823
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2230954"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..214
                     /locus_tag="VHX39_37350"
     CDS             <1..214
                     /locus_tag="VHX39_37350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996869.1"
                     /translation="NLVLLADGAIFVGVDSVMPEVMHSVIAHQRLRFRWMRAVDDKNA
                     DLPSHADRGWLLQARVPTSGFHSTPQ"
     gene            264..587
                     /locus_tag="VHX39_37355"
     CDS             264..587
                     /locus_tag="VHX39_37355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996870.1"
                     /translation="MTPSAEQQVLDEASRLARSAVRPKCYEGVGGVRHLQCGIGSIAV
                     VDHIEPAQIGRMWQFRQALQHRGFDGVARLPRASSSLVTSLASAPLNPSGTSGGSALK
                     SSPVI"
     gene            complement(726..1196)
                     /locus_tag="VHX39_37360"
     CDS             complement(726..1196)
                     /locus_tag="VHX39_37360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996871.1"
                     /translation="MPAELVDLNRIVLNLARSREFPGGSSRHGYDFIAPLDSQGRIDP
                     LLWKKYRNYCRVRRFWAGEEDEVGRLVHKPGGAEHARWVFDYNPDADDDDEAGYRFGV
                     HAFLPGEYVSISGHDGKLQTFRVVTVDPVVLSMALIKSFELEIKARSLTAVNDR"
     gene            1469..2521
                     /locus_tag="VHX39_37365"
     CDS             1469..2521
                     /locus_tag="VHX39_37365"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEX3996872.1"
                     /translation="MPFDSRARTVARVAIAILVVLLAAWVARDFLVALTWAAVIAIAV
                     WPIYIRCAISVPGGRSPAVAPLLFTLLTGLVLLVPIALAVHQIAQGSDAFARSLNQLQ
                     QSGIPVPAWLARLPIAGEYLDLWWRTNLGNPEVLVDWLRGMNTENITAWTSTLGGALL
                     HRLVLFAFTLVALFLVLRDGAWLADRALATAGHLLGHPGQRLVRKIADAIRATVSGTV
                     AAAIVKGAVMGVAYVLTGVPHPLLFTMLTMALAMVPLGAWAALAAAVLILLVHGGTWW
                     VAAGLAGFGAATLLIGENLIQPALIGGAARLPFLLVLIGVIGGMQSFGLLGLFLGPVI
                     MAALLTVWREWIGGED"
BASE COUNT          491 a          854 c          900 g          578 t
ORIGIN      
        1 caatctcgtc ctcctggccg acggcgcgat atttgttggc gtcgattccg tgatgccgga
       61 ggtgatgcac agcgtcattg cccatcagcg cctccgcttc cgttggatgc gggccgtcga
      121 cgacaagaac gccgaccttc cttctcatgc agatagggga tggcttctgc aagcgcgcgt
      181 gccgacttcc ggcttccatt ccacgccaca atgacggttt cgaacggtgt gatcggctta
      241 agctcgtctg gcacgaggaa cagatgacgc ccagcgccga acagcaggtt ctcgacgagg
      301 ccagccggct cgctcgctcg gccgttcggc cgaagtgcta cgaaggtgtc ggcggcgtgc
      361 gccatctgca atgcggtatc ggaagcatcg ccgtcgtcga ccacatcgaa ccggcgcaaa
      421 ttggcaggat gtggcagttc cgccaagcgc tgcaacaccg tggcttcgat ggcgtcgccc
      481 gcctgcctcg cgcatccagc agtctggtaa cctcattggc atcggcgcca ttgaacccgt
      541 cagggacaag cggcggcagc gcgttgaaga gcagtccggt aatatgactg tcgaagattt
      601 cggcgatctg gccgacggct gcaagccgaa catcgtctgc cggcgtgccg tccagccgaa
      661 ccatcacgtc cttgatcatg gcgaccccac ctccagccaa tgcgcgacac gccgctgccg
      721 caacgttatc tgtcgttgac ggcggtcaag gatcgcgcct tgatttccag ttcgaaggac
      781 ttgatcaggg ccatcgacag cacgacagga tcgaccgtca cgacgcgaaa cgtctgcagc
      841 ttgccgtcat gtccgctgat ggaaacatat tcgcccggca aaaacgcatg tacgccgaat
      901 ctgtagccgg cctcatcgtc gtcgtctgca tcgggattgt agtcgaacac ccagcgggcg
      961 tgctcggcgc caccgggctt gtggaccaga cgaccgacct cgtcctcctc gcctgcccaa
     1021 aatcgccgaa cgcggcagta gttgcgatac ttcttccaga gcaacgggtc gatgcgtccc
     1081 tgggagtcga gcggcgcaat aaagtcgtag ccatggcgcg acgagccgcc gggaaattcc
     1141 ctggagcggg caaggttcaa cacgatacga ttgaggtcaa ccagttcagc cggcatgccc
     1201 atggtcctcg aacatctcgt tcgagcgatc aacctcggat tggccggggc gcaccatgac
     1261 gattgtcaag acgaaacgtc tttatcgtgg ggcctggctt gttgattgcc atcaacgcga
     1321 tccgatgcag cgtagcctct gctgcggatg gaggatgcga cggaaataat gtgtcggcgc
     1381 gatcgaggcc tgactgacaa tgctgcggca tgcgggacta gagtcaaacg atggtggcag
     1441 ggggcttcgg cctcttgaga aggcagcgtt gcccttcgat tcacgcgcgc gcaccgtggc
     1501 gcgcgttgcg attgcaatcc tggtcgtgtt gctggcggcc tgggtcgcac gcgatttctt
     1561 ggtggcactg acctgggcgg cagtgatcgc catcgcggtc tggccgatct acatccggtg
     1621 cgcgatttcc gtccctggcg gtcgttcgcc ggcagtggcg ccactgttgt ttacattgct
     1681 gaccggcctg gttctgttgg tgccgatcgc attggcggtg catcagatcg cgcagggcag
     1741 cgatgctttt gctcgctcgc tcaatcaact gcagcagagc ggaatcccgg ttccggcctg
     1801 gctcgcacga ttgccgattg ccggcgagta tcttgatctg tggtggcgga ccaacctcgg
     1861 caacccggag gttctggttg actggcttcg cggcatgaac accgaaaata tcacggcatg
     1921 gaccagcacc ctcgggggcg cgttgctgca ccggctggtt cttttcgcgt ttacgttggt
     1981 cgcgttattc ctggtgcttc gcgatggtgc ctggctggcg gaccgcgcac tggctactgc
     2041 cggccacctg ctcgggcatc ccggccagcg cctggtcaga aagatcgccg acgccatccg
     2101 cgccaccgtg agcgggacgg tggccgccgc gatcgtgaag ggcgccgtga tgggcgttgc
     2161 atatgtcctg acaggcgtgc cacatccgct gctgttcacc atgttgacga tggcgctggc
     2221 gatggtgccg ctcggtgcgt gggcggcgct ggctgcggcg gtgttgatcc tgctcgttca
     2281 tggcggcacc tggtgggtgg ctgccggtct tgccggcttc ggcgcagcga cattgctgat
     2341 tggcgaaaat ctcattcaac cggcactgat cggaggtgcc gcgcggctac cgttcctgct
     2401 ggtgctgatc ggagttatcg gcgggatgca atcgttcgga ttgcttggcc tgttcctcgg
     2461 tcccgtgatc atggcggcgc tgctgaccgt ctggcgcgaa tggatcgggg gcgaggattg
     2521 accgggtccc gcgcctgatg gtcaccactg ccccaggccg cgccagtcct cacacgcgcc
     2581 aagcttcttc aggacgtgat tgcacaaggc gcactcaaag gtatgcaggt cggtgcccga
     2641 aaatgccggc acgatgcggg cgagcatcat ctgagcctgg cacttcggac aggcaggacg
     2701 ttcaatcgcc ccgagcggaa cgatggacga caggttgggg catgatgctt ccttcgaaca
     2761 ggcgctagag cctgtcctca attattggat tcccaagacg ttcaccaagt gattcatggg
     2821 agg
//
LOCUS       DATAVD010001960         3296 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1672904, whole genome shotgun sequence.
ACCESSION   DATAVD010001960 DATAVD010000000
VERSION     DATAVD010001960.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3296
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1672904"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..981
                     /locus_tag="VHX39_37370"
     CDS             <1..981
                     /locus_tag="VHX39_37370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996873.1"
                     /translation="DSASGQPVGNLLTTHPAEMGVLYATHYHRLDPWRGPIIDRPLGQ
                     PVRGSQLIDDRDLARGAYYNEFGQQIGTFHMLAVVAPLKRQAGSPLFALTLHRAKKFE
                     PFEAAAIQRLCLLMPHVRRSMQLRDTLQPAKVTLAASLVEAMLEEIPEAAFVCDPQGR
                     VLHVNDRAKVADQAGVINLRSRESTRAVATQTTEWTRQLHSLIASAGRSEAGGVTRVA
                     SSAFAMVAPLTPALTERFGLPRGRVLVLIRGLPAPLRSLTNDVRTLLHFTEAEAEVAC
                     GLAGGSSPNEIAADRGVRVSTIRTLLERAMSKAGVDNLRHLTALLATISR"
     gene            1346..2305
                     /locus_tag="VHX39_37375"
     CDS             1346..2305
                     /locus_tag="VHX39_37375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012650068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEX3996874.1"
                     /translation="MPYKFNESRRHKIPKARYRVTNWPEYDTALMRRGSLTVWLTEEA
                     ISAWHAPATGQRGGQAIYADIAIETGLALRLVLHQPLRQTEGALRSIADLLGVQIRIP
                     DHTTFSRRGGGLKVLPQRIDRNEPLHLLIDSTGVKIYGEGEWLDQKHGVRSRRRWRKL
                     HLAVGANTHEIAAVELTPDDVGDVSALPDLLDQVGDPVGSITADGAYDGDTVYDEMLR
                     RYPAARVIIPPRSTAILSEAGTTQRDDHLRSIEQHGRLGWQRRSGYGRRSLVETAMYR
                     YKTIIGRRLHARTLPNQRIEAKIGCNVLNRMTSLGMPVSVRVQ"
     gene            complement(2344..2907)
                     /locus_tag="VHX39_37380"
     CDS             complement(2344..2907)
                     /locus_tag="VHX39_37380"
                     /inference="COORDINATES: protein motif:HMM:NF015038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEX3996875.1"
                     /translation="MQDLVLSVRAIRYRRERWIAPDGQIIVAPLPAGTKGHFGPDLRR
                     FVLMLYHQGQSTLPRLAALLQSVGVSISKREIQRLLTDKQDGFLTEARDVLRAGLETS
                     SWISVDDTGARHQAKNGFCTQIGNDCFTWFGTRRSKSRLNFLDLLRGGHTDFVLNDSA
                     FDYMRSRGLSAPLIARLAEAADTGVGA"
BASE COUNT          664 a          980 c         1030 g          622 t
ORIGIN      
        1 gattcggcgt cgggacagcc agtgggcaac ttgctgacga cgcatccagc cgagatgggg
       61 gtgctctacg cgacccacta tcatcgcctc gacccttggc gggggccgat cattgaccgg
      121 ccgctcgggc aacccgtccg cggcagccaa ttgatcgacg acagagacct tgcgcggggc
      181 gcctattaca atgaattcgg ccagcaaatt ggcacatttc acatgttggc ggttgtggcg
      241 ccgttgaaaa ggcaggctgg ctcgccgttg ttcgcgctca ccctacaccg tgcaaagaag
      301 ttcgagcctt tcgaagcggc tgcgattcag cgcctctgtc tgctgatgcc ccacgttcgt
      361 cgctcaatgc agctgcgtga taccctccag ccagccaagg tcacgctcgc cgcatccctg
      421 gttgaggcga tgctggagga aatacctgaa gcggccttcg tctgcgaccc tcaagggcgc
      481 gtcttgcacg tcaacgatcg cgcgaaggta gccgatcaag cgggcgtgat caatctgcgc
      541 tcgcgcgaga gcactcgagc ggtcgcaacg cagacgaccg agtggacacg gcagctacac
      601 agtctcattg caagcgcggg tcggagcgaa gcgggcggcg tcacgcgggt cgccagcagt
      661 gcgttcgcca tggtcgcacc tttgacacca gcattgactg agcgctttgg tttgccgcgt
      721 ggacgggtgc tcgttcttat tcgcggcttg cccgctccgt tacggagcct caccaacgat
      781 gtgcggactc tgctccattt tactgaggcg gaggcagagg tggcttgtgg gctcgcgggc
      841 ggctccagcc ccaatgaaat tgccgcggac cgcggcgttc gggtcagtac gatccggacg
      901 cttctagaac gcgcaatgag taaggccggg gtcgacaatc tgcgccatct cacggcattg
      961 ctggcaacta tctcaaggta ggcgggacga gcgtgtgccc ggtacaattt gaagcacgac
     1021 tcggcagggc ttgggagccg gttacgcggc ggctgagggc cacacgagcc aagtcgtaag
     1081 gctctttaca gaatcttcag gaaggcctca ttttgaccga gccatttcag tctcggccca
     1141 ggacgcgaag gctttaaggc ggtccaatag gggttgggcg tcatccatgg attggtgcac
     1201 acgaccggtc cagggatggt aggatgcttt cccctctgtg gttctgattg gcgttggtgc
     1261 atggatatac cgtaggttgc aaaccgggcg gatggcgagg ttggttcccc gaggttagag
     1321 tggctgtctg cgctgatgga aacccatgcc atacaaattc aacgaaagcc gccgccataa
     1381 gatcccgaag gccagatacc gagtgacgaa ctggccggaa tacgataccg cgctgatgcg
     1441 gcgaggcagc ctcactgtgt ggttgaccga agaagcgata tcggcgtggc atgccccggc
     1501 gacaggacag cggggtggtc aggcgatcta cgccgacatc gccatcgaga cgggattggc
     1561 gcttcgtctg gtgctccatc agccgcttcg ccagaccgag ggtgcgttgc gatcgatcgc
     1621 ggatctgctc ggcgtgcaga tcagaatccc cgaccacaca acgttcagcc ggcgcggtgg
     1681 tggactgaaa gtattgccgc aacggatcga tcggaacgag ccattgcacc tgctcatcga
     1741 cagcacgggt gtgaagatct acggcgaagg cgaatggctc gaccagaaac acggggtccg
     1801 gtcccgtcgg cgctggcgca agctgcatct cgcggtgggc gccaatacgc atgagatcgc
     1861 cgcggtggaa ctgaccccgg acgatgttgg tgatgtctcg gcattgccgg atttgctgga
     1921 ccaggttggt gaccctgttg ggtcaataac agccgatggc gcctatgacg gcgacacggt
     1981 ttatgacgag atgctgcgcc gatatcctgc ggcgcgcgtg atcatcccgc ctcgatcgac
     2041 agcgattttg agtgaggccg gcacgacgca gcgcgatgac catcttcgtt cgatcgaaca
     2101 acatggacgg cttggatggc aacgtcgttc gggatatggc aggcgcagtc tggtcgagac
     2161 ggcaatgtat cgatataaga ctatcatcgg acggcgcctt catgcccgga ctctgcccaa
     2221 tcaacggatc gaggcaaaaa tcggctgcaa cgtcctaaac cgcatgacca gcctcggcat
     2281 gccggtctct gttcgggtcc aatgatccca gcggcgaaac gaagaaccca gccggaggta
     2341 tgttcatgca ccaacgcccg tatcggccgc ttccgccagc cgggcgatca agggtgcgga
     2401 cagtccacgg ctgcgcatat agtcgaacgc actgtcattc agcacaaaat cggtatggcc
     2461 gccgcgcagc agatcgagaa agttcagccg gctcttcgat cggcgcgtgc cgaaccaggt
     2521 gaagcaatcg ttaccgatct gcgtacaaaa accgttcttg gcttgatgcc gcgcgccagt
     2581 gtcgtcgaca gaaatccagg acgaggtctc caatccggca cgcagtacgt cgcgcgcttc
     2641 ggtgaggaaa ccatcctgct tgtcggtcag cagccgctgg atctcgcgtt tggagatgga
     2701 cacaccaacc gactgcaaca acgccgccag gcggggcaat gtcgattggc cctggtgata
     2761 cagcatcaac acaaagcggc gcagatccgg accgaaatgt cccttggtcc ccgccgggag
     2821 cggggcgaca atgatctgac cgtccggcgc gatccaacgc tcgcgtcggt agcggatcgc
     2881 ccgcaccgac agcacaaggt cctgcaccag ataaggtggt gtagcccttg aaacgtgaac
     2941 cggccggggc aaccaccgtt agcggacggt cctcaatcgt gacccgaggc gtaatcttgc
     3001 cacggcctgg gtgcttctcg cgcgggccgc gcttcgccgg atcggtggcc ttgtccatgc
     3061 cgctgggttt gatagacgga ggccccttga gacctttcaa ccgcgcgatc tcggcccgtt
     3121 gttcgttaac caaccgcttt agcgcggcaa cctcgcccac gagatcaacg agcagagcct
     3181 caagctccgt tcgactcagt ccagacgagg gtggtggcgg tggcacatcg cgatagaatc
     3241 gtactttctc gcgtcggggg aatcctcaaa atccaaaccg ccacaggttt tgcccc
//
LOCUS       DATAVD010001961         3605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1114717, whole genome shotgun sequence.
ACCESSION   DATAVD010001961 DATAVD010000000
VERSION     DATAVD010001961.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3605
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1114717"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..251
                     /locus_tag="VHX39_37385"
     CDS             <1..251
                     /locus_tag="VHX39_37385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_273701403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="UGSC family (seleno)protein"
                     /protein_id="HEX3996876.1"
                     /translation="SCSLHDAVTAERLGVPALAVMTERFVSAAQLMSRVLGMEGYQFA
                     VIPHPVSSASDADLKAMARMTLGQIQRLLLQPGSDIGG"
     gene            complement(256..>3605)
                     /locus_tag="VHX39_37390"
     CDS             complement(256..>3605)
                     /locus_tag="VHX39_37390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009539682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEX3996877.1"
                     /translation="RTLLIVNRGFADALRIGNQARPRLFDLAITLPSMLYERVEEIGG
                     RVDVHGTEIEPLDEPAAEAAFAAAVADGIRACAIVMLHAWKYPAHERRLAELARAAGM
                     TQVSASHAVSPLLRLVPRGDTTVVDAYLSPILRRYVDQVAAELRGTRLYFMQSNGGLA
                     EAGGFQGKDAILSGPAGGIVGAARTAEMAGLTRIIGFDMGGTSTDVALYAGEFERAFE
                     TAVAGVRIRAPMMAINTVAAGGGSILFFDGARMRVGPDSAGADPGPASYRRGGPLTVT
                     DANVCVGKIQPAHFPAIFGPNGDQTLDSTVVAEKFAALAEEVSRATGVVRSPCEAAEG
                     FLRIAVANMANAIKQVSVQKGHDVTRFALQCFGGAAGQHACLVADALGMETVFIHPYA
                     GVLSAYGMGLADQSAMREQAVEKTLNADLMPELEMLAEQLAHRAHAALVDQGAQPDLI
                     QHKATLHLRYAGTEAALPVPLRDLASVADDFTAAHRARFGFATPERPLIAEQVSVEAT
                     ASGDQVRETTLPGRASGAPESVDTVSLFTGGREHAARVFERTGLRSGDVIPGPVLIRE
                     ANATTVIEPGWTAEVTALDHMILRRTEAAPERVPADSGRPDPVLLELFNNLFMSVAEQ
                     TGAVLQNTSLSVNIKERLDFSCAIFDAEGRLVANAPHVPVHLGAMGESVRTVLRDRGT
                     TLKPGDVVALNNPFNGGTHLPDVTVITPVFDDTGRRILFFVGSRGHHADIGGITPGST
                     PPLSRTLEEEGVIINDFLLVDGGTFREMPFRALLAGAKYPARSPDVNVADIKAQVAAN
                     EKGVQELRKVVEQFGWPTVSAYMRHVMDNAEESVRRVIDRIGNGSFEYRMDNGKLLRV
                     AIHVDRDTRSAVVDFTGTGEQDGGNFNSPPAVTQAAVLYVFRCLVGDDIPLNDGCLKP
                     LKLIIPSGTFLSPLPGAAVVAGNTEVSQATCNAIFGALGSIACSQGTMNNFLFGDATR
                     QYYETICGGTGAGPGFNGTAAVQTHMTNTRMTDPEIFELRYPIRLERFAIRRGSGGKG
                     KWTGGDGAIRRVRFLEPMTAIIVSSRRNVAPFGLAGGADALPGQQWVERSEGQRDELT
                     GTDKTEMRPGDVFVIETPGGGGYGAAT"
BASE COUNT          671 a         1187 c         1103 g          644 t
ORIGIN      
        1 cgtcgtgcag tttgcatgat gccgtgacag ccgaacgcct gggggttccc gcacttgccg
       61 tcatgaccga acgcttcgtc agcgcggcgc agctgatgtc gcgcgttctc ggtatggagg
      121 ggtatcagtt cgcagtgatt ccgcaccccg tcagcagcgc ctccgatgcg gacctcaagg
      181 ccatggcgcg catgacgctc gggcaaattc agcgcctgtt gctgcaaccg ggatcagaca
      241 tcggcgggta gcggtttacg ttgccgcacc atacccgccg ccgcccggcg tttcgatcac
      301 gaacacatcc cccggcctca tttcggtctt gtcggttccg gtcagttcgt cccgctgccc
      361 ctccgaacgc tccacccatt gctgacccgg caacgcatcg gcgcctccgg ccaaaccaaa
      421 tggggccacg ttgcggcgcg aggacacgat gattgcggtc atcggctcca ggaagcgcac
      481 ccgcctgatg gcgccatcgc cgcctgtcca cttccccttg ccgccggaac cgcgccggat
      541 cgcgaagcgt tccaaccgta tcgggtagcg caattcaaat atttccggat cggtcattcg
      601 cgtattggtc atgtgggttt gcaccgcggc agttccattg aaaccaggcc cggcgccggt
      661 gccgccgcaa atcgtctcgt aatattgccg ggtcgcgtcg ccgaacaaaa agttgttcat
      721 cgtcccctgc gagcaggcga tcgagcccag agctccgaaa atagcattgc aggtggcctg
      781 cgagacctcg gtgttgccgg ccaccacggc ggctcccggt agcggcgaaa ggaacgtgcc
      841 agaggggata atcagcttca gcggtttcag gcaaccatcg tttaacggaa tgtcgtcacc
      901 gaccaagcaa cgaaacacgt acaggacggc tgcctgagtt accgccggcg gagagttgaa
      961 attgccgcca tcctgttccc ccgtgccagt gaagtcgacc accgccgagc gggtgtcgcg
     1021 atcgacatgg atcgcgaccc gcaacagctt gccgttatcc atccggtact cgaatgaacc
     1081 gttgccaata cgatcaatca cccggcgcac cgattcctcg gcgttgtcca taacgtggcg
     1141 catatacgcg ctgacggtcg gccagccgaa ttgctcgacg accttgcgca gttcctgcac
     1201 gcctttctcg ttggcggcga cctgcgcctt gatgtcggcc acattcacgt cggggctgcg
     1261 cgccgggtat ttcgcgcctg ccaacaaagc gcggaacggc atttcccgga atgtgccacc
     1321 atcgaccagc aagaaatcgt tgatgatgac gccttcttct tcgagcgtcc gagacaatgg
     1381 tggcgtcgat ccgggggtga tgccgccgat atccgcgtga tggccgcggc tgccgacaaa
     1441 gaacagaatt cgccgtccgg tgtcgtcgaa caccggggtg atgacggtga catcgggtaa
     1501 atgcgtgccg ccgttgaacg ggttgttcaa tgcaacaacg tcgcctggtt ttagcgtcgt
     1561 gccacggtcc cgcagcacgg tccgcacact ctcacccatc gcgcccaggt gaacgggtac
     1621 gtgcggtgcg ttggccacca ggcgaccttc ggcatcgaaa atcgcacagg aaaagtccag
     1681 ccgctcttta atgtttaccg aaagcgaggt gttttgcagc actgcaccgg tttgttccgc
     1741 cacactcatg aacagattgt tgaacagttc cagcagcaca ggatccgggc gaccgctgtc
     1801 ggccggcacg cgttcggggg cggcctcggt tcgccgtagg atcatgtggt ccaaagcagt
     1861 gacttcagcc gtccaccccg gctcgatcac agtcgtggca ttggcttcgc ggatcagtac
     1921 cgggccggga atgacatcgc cggaccgcag gcctgtgcgc tcgaatacgc gcgccgcgtg
     1981 ctcacgtcct ccggtaaaca gcgatacggt atcgactgac tcgggcgcac ccgatgcgcg
     2041 cccaggcagc gtggtttccc tgacctgatc gccgctggcg gtggcttcca cggatacttg
     2101 ttcggcgatc agcggacgtt ccggcgtcgc gaagccgaac cgggcacggt gcgcggcggt
     2161 aaagtcgtcg gcgaccgagg caaggtcgcg caatggcacc ggcaaggcgg cttcggtccc
     2221 ggcatagcgc aagtgcaggg tcgccttgtg ctggatcaga tcgggctggg cgccctggtc
     2281 caccaaagcg gcatgcgctc ggtgcgccag ttgttctgcc agcatttcca attcgggcat
     2341 caggtcggcg ttcagagttt tctcgaccgc ctgctcgcgc atcgcggatt gatcggcgag
     2401 gcccatgcca tacgcggaaa gcacgcctgc ataagggtgg ataaacacgg tctccatacc
     2461 cagagcgtcg gcgacgaggc aggcatgctg gccggcggca ccgccaaagc attgcagcgc
     2521 gaagcgggtg acatcgtggc ccttctgcac agagacctgc ttgatggcgt ttgccatgtt
     2581 ggcaacagca atccgcagaa agccttcggc agcctcgcac ggcgagcgaa ccacgccggt
     2641 cgcgcgggat acttcctcag ccagggcagc gaatttctct gccacaacag tgctgtccaa
     2701 cgtctggtcg ccgttcggac caaagatcgc cggaaaatgc gcaggctgga ttttgcccac
     2761 gcaaacattg gcgtcagtga cggtcagcgg tccaccgcgc cgatagctgg ccggaccagg
     2821 gtctgcgcca gccgagtccg ggccgacccg catacgggca ccatcgaaaa acaggatcga
     2881 cccaccaccg gcagcgaccg tgttgatggc catcatcggc gcccggatac gcacacccgc
     2941 gaccgctgtt tcgaatgccc gctcgaattc gccggcataa agcgccacgt cggtcgaagt
     3001 gccgcccatg tcgaaaccga tgatccgggt caggcccgcc atctccgccg tgcgcgccgc
     3061 gcccacgatc ccgcccgcgg gaccggacag gatcgcgtcc ttgccctgga agccgccggc
     3121 ctctgcaagg ccgccattgg actgcatgaa atagagccgc gtgcccctca gttcggccgc
     3181 tacctgatcc acgtaacgcc gcaggatcgg cgacagatac gcatctacaa cggtggtatc
     3241 gccgcgcggc accaggcgga gcaacggact caccgcgtgg ctggccgaga cctgcgtcat
     3301 cccggccgcg cgcgcgagtt ccgccagacg gcgttcgtgt gcgggatatt tccaggcgtg
     3361 cagcatcaca atggcgcagg cgcggatgcc atcggcgact gccgcagcga acgcagcctc
     3421 ggccgcgggc tcgtccagcg gctcgatctc agtgccatgc acatcgaccc gcccgccaat
     3481 ttcctccacc cgctcataca gcatactcgg cagcgtgatg gcgaggtcga acagtcgcgg
     3541 gcgagcctgg ttgccgatgc gcaatgcgtc cgcaaagcca cggttgacga tcagcaaggt
     3601 gcggt
//
LOCUS       DATAVD010001962         3566 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_744092, whole genome shotgun sequence.
ACCESSION   DATAVD010001962 DATAVD010000000
VERSION     DATAVD010001962.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3566
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_744092"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1130
                     /locus_tag="VHX39_37395"
     CDS             <1..1130
                     /locus_tag="VHX39_37395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996878.1"
                     /translation="GLAEEVTTALSRFRWISCVSGSSLAAIAGTSGEATVRWSDLDLD
                     LLLDGTIQRGGERVRITVRLLDMHAGEAVIWANRFDYDAADTLTVQDRVASAIVAQVD
                     PLLLMREGERAALRDPRGVSANELVLQAVPAIYRMDRLSFHAAGELLEAALRAEPTHT
                     EALAWYAYWHLFLVGQGWTDDPDAATRRAGELADTAVAMDSNDARALTLASHVRAFLL
                     KRPAEAAVLHDRAISLNPNLAIAWCFSGFALSYLGDHEAALIRMTKAIELSPSDPHLF
                     FFHAAIIMPHLLLGEAKEAAAAGRKAIELNPWFSSAFKGCLSALGHLGLNKEAANMLS
                     RLLNLEPNFTVQDAIRRSPMTVAADIDRYADGLRRAGLPEG"
     gene            complement(1145..2290)
                     /locus_tag="VHX39_37400"
     CDS             complement(1145..2290)
                     /locus_tag="VHX39_37400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996879.1"
                     /translation="MAAPPTQTAAAPPPPVVTPVPLADAVVNAATAVFKTASATIPAG
                     SERQVVVIDPLVNGVTGEQSTATQDIQDRIVALAKANYPQFDIQPFTAATVAKAPNVI
                     VGTFTPVNAQGQTAGTREAFRFCLVMVNLNAGKTIAKGVARAQPDGVNSTPIGFFRDS
                     PAWTNDASVKSYIDTCQATKVGDPISQVYVNGIVTASIISEAINAYDAERYRDALDLY
                     RTAEETPAGNQLRVYNGLYLANWKLNRREAAADAFGRVVEYGLNNKSLGVKILFRPGS
                     TALDTDFHSPYNMWLQQIAFHSVSGKACLQVTGNSSPSGSAAINDQLSQLRAEYVMQR
                     LEADEPSLRGHIIATGVGAQNNLIGTGADDVTDALDRRVEFKVLSAC"
     gene            complement(2373..3044)
                     /locus_tag="VHX39_37405"
     CDS             complement(2373..3044)
                     /locus_tag="VHX39_37405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996880.1"
                     /translation="MHDAGNAQDNITRVEPFACAPMAAVTGLVRHSWASSPRTFSIRT
                     DRRDPVSGSRLKIVADTTFPMLYVDFYQSDGLVRHLVRPASGAPSNPHSASVIAPAPA
                     SGLIVAIGSARPLDAAARPETESAADYLAFLQPRLDSSTMPLAADIALVMVRPPEPEV
                     PKVQRIDPVIVKPKRVDSATAKLPLSHTPALHSNRCSNIVSRAQLGETLSDAELAVLR
                     TECRS"
BASE COUNT          630 a         1042 c         1161 g          733 t
ORIGIN      
        1 ttggcctcgc cgaggaagtc acgacagcgt tgtcgcggtt ccgctggata tcctgtgttt
       61 cgggcagttc gctcgccgcc attgccggga cttccggcga agcaaccgtg cgctggtctg
      121 acctcgacct cgatctgctg ctggacggga caatccagcg cggcggtgaa cgcgtccgca
      181 tcaccgtccg cttgttggac atgcacgccg gcgaggcggt gatctgggct aatcgcttcg
      241 attacgacgc tgccgacacg ctcaccgtgc aggatcgcgt agcctcggcg atcgttgccc
      301 aggtggaccc gctgttattg atgcgggagg gcgaacgggc ggcgttgcgc gacccgcgtg
      361 gcgtctccgc gaatgagctg gtgttacagg cggttccggc gatctaccgc atggaccggc
      421 tgtcgtttca cgctgctggt gagttgctgg aggcagcgtt gcgtgccgaa ccaacccata
      481 ccgaagcact ggcctggtac gcttactggc acctgttcct ggtcggccag ggttggaccg
      541 acgatccgga cgcagcgaca aggcgagccg gagaactggc cgatacggca gtggcgatgg
      601 attccaacga tgcccgcgcg ttgaccctgg cgagccatgt gcgggcgttt ctgctgaaac
      661 ggcccgccga ggccgccgtg ctgcatgatc gcgcgatttc gctcaatccc aatctggcca
      721 tcgcatggtg cttctccggt tttgccctca gctatctggg cgaccacgag gcggcactga
      781 tccgaatgac gaaggcgatc gagctctcgc catccgaccc gcatctgttt ttctttcacg
      841 cggcgatcat catgccgcat ttgcttttgg gtgaggcgaa ggaggctgct gcagcaggcc
      901 gcaaggcgat cgaactcaat ccctggttct cgtccgcgtt caaaggctgt ctgtcagcgc
      961 ttggtcatct cggactgaac aaggaagcgg cgaacatgct gtcgcgcctt ctgaacctgg
     1021 agccgaactt cacggtgcag gatgccatcc gccgctcacc gatgactgtg gcggcggata
     1081 tcgatcggta cgctgacggt ttgcggcgcg ctggtctgcc ggagggatga gttcgcggct
     1141 gcggtcagca ggccgacagc accttgaact cgaccctgcg gtccagcgca tccgtaacgt
     1201 cgtcggctcc ggtgccgatc aaattgttct gcgcgcccac accggtggca atgatgtgcc
     1261 cgcgcaacga cggttcgtca gcctccaacc gttgcatcac atattcggca cggagctgtg
     1321 acaactggtc attgatcgcg gcggagccgg agggactgct attgccggtc acctgcaggc
     1381 aggccttgcc actgacgctg tggaaggcga tctgctgcag ccacatgttg tatgggctgt
     1441 ggaagtcagt atcgagcgct gttgaccccg gccggaacaa gattttcacc ccaagcgatt
     1501 tgttgttcag tccgtattcg accacgcggc cgaacgcgtc cgccgccgcc tcgcggcggt
     1561 tcagtttcca attggcaaga tagaggccgt tgtagacgcg cagctgattg ccggccggcg
     1621 tttcctcggc ggtccggtac aggtcaagcg cgtcgcggta gcgttcggca tcgtatgcat
     1681 tgattgcctc gctgatgatg gaggcagtga caatgccgtt cacataaacc tggctgattg
     1741 ggtcgcccac cttcgttgcc tgacatgtat caatatagct ctttacgctc gcgtcattgg
     1801 tccacgccgg gctgtcgcgg aagaagccga tcggtgtcga gttcacgcca tccggctgcg
     1861 cccgcgccac gcccttggcg atcgttttgc cggcgttcag gttgaccatg acgaggcaga
     1921 accgaaaagc ttcgcgcgtg cccgcggtct gaccttgagc gttgaccggc gtgaacgtgc
     1981 cgacgatgac atttggcgct ttggcgactg tggcggcggt aaatggctga atgtcaaatt
     2041 gcggatagtt ggctttcgca agggcgacga tgcggtcttg aatatcttgc gtggcggtgg
     2101 attgctcacc ggtgacaccg ttcaccaatg gatcgatcac cacgacctga cgctcgctgc
     2161 ccgcggggat agtcgcggat gccgttttga aaaccgcggt tgcggcgttt accacggcgt
     2221 ctgcgagcgg caccggagtc accaccggcg gcggtggtgc tgcggccgtt tgcgttggcg
     2281 gcgccgccat attcgtacat cccgtcatca gcgcggcggt cgcgcaggca acccaaaggt
     2341 ttcgcgttac gctatacaaa tgagcgaaac gatcacgacc ggcattcggt ccgtaacacc
     2401 gcgagttcag catctgataa cgtttcccca agttgcgccc ggctaacgat attggaacaa
     2461 cggttggagt gcaacgctgg tgtgtgagac agcggaagtt ttgcagtggc cgagtcaacc
     2521 cgtttgggct ttacgatcac cgggtcgatc cgttgaacct tcggcacctc cggttccggt
     2581 gggcgcacca tcaccaacgc gatgtctgcc gccagcggca tggtggaact gtccagtcga
     2641 ggctgcaaaa acgccagata atccgcggca gattcggttt ccggccgcgc tgcagcatcg
     2701 agcggccttg ctgatccgat tgcgacaatc aggcccgaag cgggtgccgg tgcgataacc
     2761 gacgcactat gcggattgct cggtgcaccc gaagcaggcc gaacaaggtg tcgaaccaaa
     2821 ccatcgcttt gataaaaatc aacataaagc atcgggaaag tcgtatcagc aacaattttt
     2881 aatcgtgatc cgctgactgg atcccggcga tcggttctga tagaaaatgt tcgcggactg
     2941 ctcgcccacg agtggcggac caacccggta acagccgcca ttggtgcaca ggcgaatggt
     3001 tctacacgcg tgatgttgtc ttgcgcattg cctgcgtcat gcacctgcgc cagtaggcga
     3061 tcgagttccg gtccggaacg tgcaagtccc gaaatgctca ggccggtggg ttcacctgag
     3121 acactaagca ccgagcaagg taccaactca gctgccgtgc gcgcttgttc aagcggtgat
     3181 ggcgcgacca ggactggcgt ggccgggacc gccgcgaccg ggagtggcgt ggccgggatt
     3241 ggcgtggccg ggattggcgc gaccgggatt ggcgcgaccg ggattggcgc gaccgagagt
     3301 ggcgcgaccg ggattggcgc ggctggctcc ggtggaggcg taacgtttgt cgtcggcaac
     3361 ggcgtcgatg gagtatcgtg cggcaggtcc ccagcttgcg gtgcaacggc ggccggctgg
     3421 cttaccgctg gcggtaaggt ggggttggac aatgcaacgg cctggcccgg gtccgttccc
     3481 ggtgggtggg atggagattg tgtcgcgttt ggttctggcg tgactggttg cgcggccacc
     3541 tcatggcgca gaattgacgg tgtcga
//
LOCUS       DATAVD010001963         2159 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_744171, whole genome shotgun sequence.
ACCESSION   DATAVD010001963 DATAVD010000000
VERSION     DATAVD010001963.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_744171"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..853)
                     /locus_tag="VHX39_37410"
     CDS             complement(<1..853)
                     /locus_tag="VHX39_37410"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEX3996881.1"
                     /translation="MSRYWSELARGLSPYVPGEQPLIPGLVKLNTNESPFGPSPKAIE
                     AVRTAAADTLRLYPDPLSTRLRETLADYHKVAPEQVFVGNGSDEVLAHAFAALLKQPR
                     PVLFPDVTYSFYPVWCRLLGIDHETVPLDAAMRVRVDDYLDRGGAIIFANPNAPTGIA
                     LSRAEIERLVVQRDDVPMVIDEAYVDFGAETCVPLIREHPNLLVVQTMSKSRALAGLR
                     IGYAIGDAALIQALTRVKDSFNSYPLGRPAEAGAIAAVSDESYFQETRAAIMRNRADL
                     TAALTKLG"
     gene            complement(930..2090)
                     /gene="zapE"
                     /locus_tag="VHX39_37415"
     CDS             complement(930..2090)
                     /gene="zapE"
                     /locus_tag="VHX39_37415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019085227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HEX3996882.1"
                     /translation="MDTNAVPSPGPLPAWRAMVANGELAPDPSQEYAARHLQTLWDAL
                     RNYEPAPLPPPVNGLLGRLLRRKTVDVVAPEGTPRGIYLVGEVGRGKSMLMDLFFADA
                     EVRRKQRIHFHRFMQTSHARVFAWKQANPNGSDPIPPLADTIARDAALLCFDEFQVND
                     IADAMILGRLFQALFARGVVVVATSNIAPDDLFKGQPGRDAFLPFIALIRQRLDVVMM
                     DAGRDFRRERMRGLRTWHVPADGFSRRALDQAFATLTGDVPPQAVTLTVTGRKLVVPA
                     AAEGVARFDFATLCGTALGPGDYLAIATKFHTLVLDEIPLLSPDNYDEARRFINLVDT
                     LYDQRVKLIASADALPDQLYRRGTNAKMFERTASRLDEMQSEEWLEQEHIAS"
BASE COUNT          433 a          708 c          645 g          373 t
ORIGIN      
        1 acccaagctt ggtcagcgca gcagtcaggt ccgcgcgatt gcgcatgatg gccgctcgcg
       61 tctcctggaa atagctttca tcactgacgg cagcgatcgc gcctgcctca gcgggtcggc
      121 ccaggggata ggagttaaaa ctgtctttga cccgtgtcag agcctggatc aatgccgcat
      181 ccccgatcgc gtagccaata cgcaggccgg cgagcgcacg cgacttggac atggtctgaa
      241 ccaccagaag attgggatgc tctcggatca gaggcacaca ggtttctgcg ccgaaatcga
      301 cataggcttc gtcgatcacc atcggcacat cgtcccgctg cacgaccagc cgctcgatct
      361 ccgcacgcga cagggcgatc ccggtcgggg catttgggtt ggcgaaaatg atggccccgc
      421 ctcggtccag gtagtcgtcg accctcacgc gcatcgccgc gtcgagcggg accgtctcat
      481 gatcgatgcc caacagccgg caccagaccg ggtaaaagct gtaggtcaca tctggaaaca
      541 acaccggtct gggctgtttc agcagcgccg cgaaggcatg cgccagaact tcgtccgatc
      601 cgttgccgac gaagacctgc tcaggtgcga ccttgtggta atcggccagt gtttcgcgca
      661 gccgcgtgga tagcggatcg gggtaaagcc gaagcgtatc ggcggccgct gtacgcaccg
      721 cctcgatcgc cttcggagac ggtccgaacg ggctttcgtt ggtattcaac ttcacgaggc
      781 ccgggatcaa gggttgttca cccggcacgt agggcgacag gcctcgggca agctccgacc
      841 aatagcggct cacgattttt ctccggaaga tcaaccgacg gatgacggtt cagacttcgc
      901 cggtcaagga cggccaaccc acccaacttc taactggcga tatgctcctg ctccagccat
      961 tcctcgcttt gcatttcatc cagccgtgac gcggtgcgtt caaacatctt cgcattcgtg
     1021 ccgcgccggt acaactgatc cggcagagca tcggccgacg cgatcagctt cacccgctga
     1081 tcgtataacg tatcgaccag attgatgaag cgccgcgcct cgtcgtaatt gtccggcgac
     1141 agcagcggaa tctcatccag caccagcgta tgaaacttcg ttgcgatcgc cagatagtcc
     1201 cccggcccca gagcggtccc gcacaacgtg gcaaaatcga accgcgccac gccctcggcc
     1261 gctgccggca ccaccagctt acgcccagtg accgtcagcg tgaccgcttg cggcggcacg
     1321 tcgccagtca acgttgcaaa tgcctgatcc agtgcgcggc gagaaaaccc atccgccggt
     1381 acatgccagg tccgcagccc tcgcatccgc tcacgccgga aatcgcggcc ggcatccatc
     1441 atcaccacgt cgagccgttg cctgatcagc gcaatgaacg gcagaaacgc atcgcgtccc
     1501 ggctggccct tgaacaaatc gtcgggcgcg atgttggagg tggcgaccac caccacccca
     1561 cgcgcaaaca gcgcctgaaa cagccggcca aggatcatgg catcggcaat atcgttgacc
     1621 tggaactcgt caaagcacag cagagcggcg tcgcgcgcga tggtgtcggc caacggcggg
     1681 atcggatcgc tgccgttggg attggcctgc ttccaggcaa acacccgcgc atgggaggtc
     1741 tgcatgaaac gatggaaatg gatgcgttgt ttgcgcctca cctcggcgtc ggcgaagaac
     1801 aggtccatca gcatcgattt gccgcgcccg acctcgccca cgagatagat gccccgaggc
     1861 gtgccctcgg gtgccacaac gtcaaccgtc ttgcgccgca acagccggcc cagaagtccg
     1921 ttgacggggg gtggtaacgg agccggttca tagttgcgca acgcgtccca tagcgtttgc
     1981 aaatgccgcg ccgcatactc ctgcgagggg tcgggcgcca gttcgccatt tgccaccatg
     2041 gcgcgccagg ctggcagggg accgggagaa gggacggcat tcgtatccat ggcggcacgg
     2101 tccgatagcg cgtcctgcgc gccgccgcca gcgtgatcgc gcagggtcgc agcaagacc
//
LOCUS       DATAVD010001964         1754 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3345074, whole genome shotgun sequence.
ACCESSION   DATAVD010001964 DATAVD010000000
VERSION     DATAVD010001964.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1754
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3345074"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..339
                     /locus_tag="VHX39_37420"
     CDS             <1..339
                     /locus_tag="VHX39_37420"
                     /inference="COORDINATES: protein motif:HMM:NF033564.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HEX3996883.1"
                     /translation="NAIAMVESTRETKGVIEKDTRVFITSLVMLAHLLGPVIRSHWAI
                     ENSLYWVMDMTFRDDECRVRTNHAPANFTTIKHMARNLLRRPISKDSFRLRRKVAGWD
                     DEFLASLLTA"
     gene            593..1477
                     /locus_tag="VHX39_37425"
     CDS             593..1477
                     /locus_tag="VHX39_37425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012554220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3996884.1"
                     /translation="MIVDGDQKTFMADVIEASRTLPVLVDFWATWCGPCKTLTPTLEK
                     VVKAAGGRVKLVKIDIDQNQALVRQLAQLGLPLQSVPTVAAFWQGQIADLFQGAQPES
                     EVKRFVETLLKAAGGSMPAADLLAEARAAMDEGDTQGAVELFSELLQQEPENGDAWGG
                     LIRALLALGHEAEAADALAKVPEKLAEHAEIAGARSALILAEEGRKARSQLDTYKTRL
                     EADPKDHQARYDLATALNAMGEHEQAADALLEIMRRDRKWNEEAARLQLLKFFEAWGA
                     EDPVTGTARRRLSSILFS"
     gene            1478..>1754
                     /locus_tag="VHX39_37430"
     CDS             1478..>1754
                     /locus_tag="VHX39_37430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEX3996885.1"
                     /translation="MAGFRTRFEELPTEFALFPLPGVLLLPRGRLPLNIFEPRYLALT
                     EDALAAGRMFAMIQPDPTLPETPNGPGLHRIGCLGRLSSFSETDDGRF"
BASE COUNT          349 a          555 c          540 g          310 t
ORIGIN      
        1 aacgccatcg cgatggttga gagcacgcgc gaaaccaaag gcgtgatcga gaaagacacc
       61 agggttttca tcacgtcact ggtcatgctg gcgcatctcc tcgggccggt catacgcagt
      121 cattgggcga tagagaacag cctgtactgg gtcatggata tgacctttcg cgatgatgaa
      181 tgcagggtcc gaaccaatca tgctccggcc aatttcacca ccatcaaaca tatggcgcgc
      241 aacctgcttc gaaggcccat ctccaaggat tcattccgcc tccgacgaaa ggtcgcgggg
      301 tgggacgacg agttcctcgc aagccttctc acggcgtgaa aatgttcacc cgattcgcct
      361 ggccacacgc cgaacacccg tctggacgcg cgccgcgcat gacggcatgg tccgctgtga
      421 ctccgcgccg cttgcaattc gggcgccaca cgacatttat ccgtcgtaac agatccatat
      481 ccggcggatg cccgcaaagc ggtgtcacga cgggccctaa cgaaagccgc acaccatgga
      541 ccacatcatc ggtcagaccc catccggcga cggcaccgct ccgccaaaga atatgattgt
      601 cgacggcgac cagaagacct ttatggccga cgttatcgag gcgtcgcgca ccctaccggt
      661 gctggttgat ttctgggcaa cctggtgcgg cccctgcaag acgctgacgc cgacactgga
      721 gaaagtcgtc aaagccgcag gcggccgggt caaattggtc aagatcgaca tcgaccagaa
      781 tcaggcactg gtccgtcagt tggcccaatt ggggctgccg ttgcaatcag tgccgacggt
      841 ggccgcgttc tggcagggcc agatcgccga cctgttccag ggggctcaac ctgaatctga
      901 ggtcaagcgc ttcgtcgaaa ctctgcttaa ggctgcgggc ggatcgatgc cggctgccga
      961 cctgctcgcc gaggcgcgcg ccgccatgga cgaaggcgac acccagggtg ccgttgagct
     1021 gttcagtgag ctgctgcaac aggagccgga gaatggcgac gcctggggtg gcctgatccg
     1081 cgcgctgctc gccctgggcc acgaggcgga agcggccgat gccctggcga aggtgccgga
     1141 gaagctggcc gaacacgccg aaattgcggg tgctcgcagc gcgttgatac tggcggagga
     1201 ggggcgcaaa gcgcgatccc aactcgacac ctacaagacg cgcctggagg cggatcctaa
     1261 ggaccatcag gcgcggtacg acctcgcaac cgcgctcaac gcgatgggtg aacacgaaca
     1321 ggccgccgat gcgctgctgg aaatcatgcg gcgcgaccgc aaatggaacg aggaagccgc
     1381 tcgcctgcag ttattgaaat tctttgaggc ctggggtgct gaggatccgg tcaccggcac
     1441 cgcgcgccgc cgcctttcat cgatcttgtt cagttagatg gcagggtttc gcacacgctt
     1501 cgaggaactg cccaccgagt tcgcgctctt cccgctaccc ggcgtgctgt tgttgccccg
     1561 cggccggctg cccttgaaca tctttgagcc ccgctacctc gcgttgaccg aagacgcgct
     1621 ggccgctggc cgaatgttcg ccatgatcca gccggatccg acgctgcctg agaccccgaa
     1681 cggcccaggc cttcatcgga tcggttgtct gggccggctc tcgtcattca gcgagaccga
     1741 tgatgggcgg ttcc
//
LOCUS       DATAVD010001965         1795 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_2232344, whole genome shotgun sequence.
ACCESSION   DATAVD010001965 DATAVD010000000
VERSION     DATAVD010001965.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1795
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2232344"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..1666)
                     /locus_tag="VHX39_37435"
     CDS             complement(50..1666)
                     /locus_tag="VHX39_37435"
                     /EC_number="1.1.99.1"
                     /inference="COORDINATES: protein motif:HMM:NF002550.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="choline dehydrogenase"
                     /protein_id="HEX3996886.1"
                     /translation="MAEFDYIIVGAGSAGCVLANRLSEDRSATVLLLEAGPKDSSMWI
                     RIPAGFTKLLNNPTYNWNFESEPEPNANNRRIPIPRGRTLGGSSAINGMLYVRGNPLD
                     YNTWSQFGNQGWGYDSVLPYFRKAEHFAPGGDDSRGRGGPLNVEHMRERAELLDAFID
                     AAVDQGFPRNKDYNNGHQEGFGYFQVTQKNGERWSCARGYLDPIRNRPNLKIETDSLT
                     TKVLLKGKRAVGVAYTQGGVTKEAHANREVILAAGAVKSPHLLELSGIGNPELLSPLG
                     IEIQHALPGVGENYRDHYAPRMNWRVKLPVTLNERSRGLALAKEVFKYYTQRRGILTF
                     TAGIAYGFIKTRPELEEPDVQFHFAHASYGNAQKRDLETEPGMTLTTYQCRPESKGSI
                     HAKSNDPTAAPAIRPNYLADPIDQRVLVDGMKIGRSIIGSRVLDKYRAYEMNPGEKVQ
                     SDAEWLQFARENGQTTYHVIGTCKMGPDTMAVVDDRLRVHGIAGLRVVDASIMPTVPS
                     GNTNAAVIMIAEKGADMIKAATADDLRAAA"
BASE COUNT          284 a          537 c          583 g          391 t
ORIGIN      
        1 ggcttgggcc gcgaagagcg ggtcaagggg gaagtgcccc tcgccttcgc taagctgccg
       61 cccgcaggtc gtcggcggtc gccgccttga tcatgtcggc gcctttttcg gcgatcatga
      121 tgaccgctgc gttggtattg cccgacggca cggtcggcat gatcgaagca tccaccacgc
      181 gcagtccggc gataccatgc acacgcaggc gatcgtcgac cacggccatc gtgtccgggc
      241 ccatcttgca ggtgccgatc acatggtagg tggtctggcc attctcgcgg gcgaactgca
      301 gccattcggc gtcgctttgg actttttccc cggggttcat ctcgtaggcg cggtatttgt
      361 ccaggacacg gctgccgata atgctgcggc cgattttcat gccgtccacc agaacgcgct
      421 ggtcgatcgg gtcggccagg tagttcggtc ggatcgccgg cgcggccgtg ggatcgttcg
      481 acttggcgtg gatcgagcct ttcgattccg gccggcactg ataggtcgtc agggtcatgc
      541 ccggttcggt ttccaggtcg cgcttttgcg cgttgccgta gctggcatgg gcgaaatgga
      601 actggacgtc gggttcctcc agctccggcc tggttttgat gaagccatag gcgatgccgg
      661 cggtgaaggt caggatgccg cgccgctggg tgtagtattt gaacacctcc ttggccaagg
      721 ccaggccacg gctgcgttca ttcagcgtca ccggcagctt cacccgccag ttcatgcgcg
      781 gagcgtaatg gtcgcggtag ttttcaccga ctccgggcaa agcgtgttgg atctcgatgc
      841 ccagcggtga cagcaactcg gggttgccga tgccggacag ttccaacagg tgcggcgatt
      901 tcacggcgcc ggcggccagg atgacctcgc ggttggcgtg cgcttccttg gtgacgccac
      961 cctgggtgta ggcgacgcca acggcgcgct tgcccttcag cagcactttc gtcgtcaggg
     1021 aatcggtttc gatcttcagg ttgggccggt tgcgaatggg atcgaggtag ccccgcgcac
     1081 acgaccagcg ctcaccgttt ttctgagtca cctggaagta gccgaaccct tcctggtggc
     1141 cgttgttata atccttgttg cgcgggaatc cctgatccac cgcggcgtcg atgaacgcgt
     1201 ccagcagctc ggcacgctcc cgcatatgct cgacgttcag cgggccaccg cggccgcgcg
     1261 agtcgtcgcc gccgggggca aaatgttcgg ccttgcggaa atacggcaac accgaatcgt
     1321 agccccaacc ctggtttccg aactgcgacc aggtgttgta gtcgagcggg ttgccacgga
     1381 catacagcat gccattgatg gcactggatc cgcccaacgt gcgcccgcgg ggaattggga
     1441 tgcgccgatt gttggcgttg ggttccggct cgctctcgaa attccagtta tacgttggat
     1501 tgtttagcag cttggtaaat ccggccggga tcctgatcca catggagctg tctttcggcc
     1561 cggcttccaa tagcagcacg gtggcgcttc tgtcctcgct caggcgattt gccagcacac
     1621 agccggcgga accggcgccc acgatgatgt agtcgaactc ggccatacgt ttcatccctc
     1681 gtttgtgacg ggtctatact ctttggcgcg gtccggcgga aggctcgcgg ctttgcggat
     1741 gacagggggt gtggcagaca ggcgttgcga tgggggattc agcacgattc tcctt
//
LOCUS       DATAVD010001966         2481 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_371607, whole genome shotgun sequence.
ACCESSION   DATAVD010001966 DATAVD010000000
VERSION     DATAVD010001966.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2481
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371607"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..911
                     /locus_tag="VHX39_37440"
     CDS             <1..911
                     /locus_tag="VHX39_37440"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEX3996887.1"
                     /translation="DAAALRNAAILLCRRRRDNVQAADLAEQARLDGVADANTFGLKG
                     HALAGLGCHEPAALAYNEALKLAPGDAHLQHIAAAARVRSNAPEDFVRALFDGGADRF
                     EAHIIALGYCIPGLIRRHVIEFAALANTGPVLDLGCGTGLIALALSDLPLGPFTGIDV
                     SPRMLERARAKGLYSSLREARLPAALHGDTTTWRLILAGDVLCYFGALDDMFRAVFGR
                     TRPGGRFIFSLEELLPDHNSAMLHDTDWAAGRMGRHAHAAEYVSATAAASGFQCLRLD
                     RETLRYEAGGPVAGLLVVLERPRGDA"
     gene            961..>2481
                     /locus_tag="VHX39_37445"
     CDS             961..>2481
                     /locus_tag="VHX39_37445"
                     /inference="COORDINATES: protein motif:HMM:NF025214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEX3996888.1"
                     /translation="MNRAIDLDRAGDSEAAQASMQQLAERLPDWDEPLARLADSQRAR
                     GAGAAATDAYRAVLALNPNRISALLALGALLIEAGAAQDGTVPLLRCCGLAPENQDAW
                     STLGRAYADAGSPGLALAAFRRAQRLAPGSIAIVHRLVAVALAAGQATQEVARLDALS
                     ERDPLNPILHLARGLILDGLGLLDPAVDALEAAVALAPEARDPIRILAGVLSRTARSR
                     DAEAALRQALVLDPTNPQLMNDHAAVLMRVHRHAEARDLLQEVLLRNGPHATVLCNLA
                     NATLCLGMQPEALELAQSAVDLDPDAVMPRRSLINTLPYQSGVTGAGLLQAARACAER
                     LPRGSLPVLHKASGRDRVLTVGLLSGSLRTHPVGWLTIAGFENLDPAAFRIICLSRAL
                     EPGDPIAMRFQSVARSWENVAPLDDAALAQRARDLGIDVLIDLGGHGDGSRMTACAQR
                     LAPVQIKWVGMQNHSSGLPEMDWFLTDRWETPPALETLYSERMLRLRDGYVCYSPPA"
BASE COUNT          380 a          776 c          863 g          462 t
ORIGIN      
        1 cggatgcggc cgcactgcgc aatgccgcga tcctgctttg ccgtcgccgt cgggacaacg
       61 ttcaggcggc agacctggcc gaacaggccc gcctcgatgg cgtggcagac gccaacacgt
      121 tcggactgaa aggccacgca ttagcaggtc tgggttgtca tgagccggcc gcgctggcct
      181 acaatgaagc gctgaagctc gcgccgggcg acgcccacct gcagcacatc gcagccgccg
      241 cgcgggtcag gtccaatgcg ccggaggatt ttgtccgggc gctgttcgac ggcggtgcgg
      301 accgctttga agcccatatt atcgcgctgg gttactgcat acccggcctg atccggcgcc
      361 acgtgattga gttcgcggcg ctggccaata ccggaccggt gctcgatctg gggtgcggca
      421 cgggcctcat tgcgctcgcg ttgtccgatc tcccgctcgg tccgtttacc ggcatcgatg
      481 tgtcgccacg catgctggag cgggcgcggg ccaaagggct ttacagttcg ttgcgggagg
      541 cgcgcctgcc cgccgccctg cacggcgaca cgaccacatg gcgtttaatc ctggcgggtg
      601 acgtgctgtg ttatttcggc gcattggacg acatgttccg cgctgtcttc ggacgtacgc
      661 ggccaggcgg acgtttcatc ttctcactcg aagaattgtt gccagaccat aacagtgcca
      721 tgctgcacga caccgactgg gcggccggac ggatgggccg ccacgctcac gcagcggaat
      781 acgtttcagc gaccgcggca gcatccggat ttcagtgtct aaggttggat cgcgaaacct
      841 tgcgatatga ggcgggcggt ccggtggccg gcctgctggt ggtgctggaa cgcccgcgcg
      901 gcgatgcctg acggcctgca agtgcgatcc gatcgcgctg gttccacgcc ggctgaatgg
      961 ttgaaccgtg cgatcgatct cgatcgagcg ggagacagcg aggcggcgca ggcgtcgatg
     1021 caacagctcg cggaacgtct gccggactgg gacgaaccgt tggcgcggct ggccgacagt
     1081 cagcgggcgc gcggcgccgg cgcggcagca acagacgcct atcgtgccgt cctggcattg
     1141 aacccgaacc gcatatcggc gctgctcgct ctgggtgcct tgttaatcga agcgggtgcc
     1201 gcacaggatg gaactgtgcc gctgttgcgg tgctgtggtc tggcccccga gaaccaggac
     1261 gcctggtcga cgcttggccg cgcctatgcg gacgccgggt cacctggact ggcactggcg
     1321 gccttccggc gcgcgcaacg tttggcgccg ggatcgattg cgatcgtgca ccggctggtg
     1381 gccgttgcgt tggccgccgg acaggcgacg caggaggtgg cgcgcctcga cgcgttgagc
     1441 gaacgcgatc ctctcaaccc gatcttgcat ctggcccgcg gcctgatcct ggacgggtta
     1501 ggtttgcttg acccggcggt cgacgcgctg gaggcagccg tggcattggc tcctgaggcg
     1561 cgcgatccga tccggattct cgccggcgtg ttgagccgga ccgctcggtc ccgcgacgcc
     1621 gaggcagcgt tgcgccaggc gctggtgctg gatccaacca atccgcaatt gatgaacgac
     1681 cacgccgccg tgctgatgcg cgtgcaccgc catgccgagg cccgcgatct gctgcaggaa
     1741 gtgttgttgc ggaacggccc gcacgcaacg gtgctgtgca atctcgccaa tgcaacgctc
     1801 tgtctgggca tgcaaccaga ggcgttggaa ctggcccagt cggcggttga tctggatccg
     1861 gacgcggtga tgccaagacg gtcgctgatc aatacgttgc cgtatcagag tggtgtgacc
     1921 ggcgccgggt tgctgcaggc agcgcgcgcc tgtgccgaac ggctgccgcg tggatcgttg
     1981 ccggtgctgc acaaggcctc cggtcgtgat cgggtgttga ccgtcggatt gctgtccggc
     2041 tcgttgcgca cccatccggt tggctggctg accattgccg ggtttgagaa tctcgatccg
     2101 gctgcgttcc ggatcatttg cctgagccgt gcgctggaac ccggggatcc catcgccatg
     2161 cggttccaat ccgtggcccg gtcgtgggag aatgtcgcgc cattggacga tgccgccctg
     2221 gcgcaacggg cacgcgatct gggcatcgac gtgctgatcg atcttggcgg gcacggcgac
     2281 ggttcgcgca tgactgcctg tgcgcagcgg ctggcaccgg tgcaaatcaa atgggtcggg
     2341 atgcagaacc attcctcggg actgccggaa atggactggt tcctgaccga tcgctgggag
     2401 acgccgcccg cgctggagac gctgtattcc gagcggatgt tacgcctgcg ggatggatac
     2461 gtgtgttaca gcccgcccgc c
//
LOCUS       DATAVD010001967         2761 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1860002, whole genome shotgun sequence.
ACCESSION   DATAVD010001967 DATAVD010000000
VERSION     DATAVD010001967.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2761
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1860002"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            289..2223
                     /locus_tag="VHX39_37450"
     CDS             289..2223
                     /locus_tag="VHX39_37450"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEX3996889.1"
                     /translation="MIVTDFPHAIREIEHLWIPLSDGTRLAARIWLPDDADRKPVPAI
                     LEYLPYRKRTGTYERDALTHPWFAGHGYAGVRVDIRGSGESDGLLFDEYALQEQDDAL
                     EVIEWLAAQSWCSGAVGMMGISWGGFNGLQVAARRPPALKAIITLCSTDDRYRDDVHY
                     MGGALLRAGFGWASFLFGAMCHPPDPALVGESWRPTWLNRLQNLPFFLELWLRHQQRD
                     AYWQHGSVCEDYAAIQCPVFAVGGWTDGYTNAIPRLLAHLSVPRKGLIGPWAHGYPHV
                     ALPGPQIGFLQEALRWWDHWLKDIDTGVMDEPMLRAWMTQSVRPAPFHEALPGRWVAE
                     AEWPPSGTKPGRLHLTDAGLEAMAGNLTPRAVCSPLTVGKDGGSWCPFGSSPDQAGDQ
                     KDDDAQSVLFETSLLDSDMEILGAAVVTLDVASDKPLANLIVRLCDVHPDGASLRVSY
                     GILNLAFREGYDRPSRLQPGQRYRIHIQLNDAGSVIPSGHRIRLAISTNYWPMIWPAP
                     DSPTVTVFGGSVDLPVRAPKSSDNLLPVLPAPETASPEPTTQLPLGVVRIDRLGLELG
                     SEGDFSAHIDPDDPLSAVVEMRQSQTVSRDDWRTRFETTTRLSCSRDAVKLNATMVAW
                     DGDTEVCRRAWETQVPRAFL"
     gene            2263..>2761
                     /locus_tag="VHX39_37455"
     CDS             2263..>2761
                     /locus_tag="VHX39_37455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011631211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosidase"
                     /protein_id="HEX3996890.1"
                     /translation="MQEGSKSAAADPERRRLDAMRNGNENWRGWGPYVSERQWGTVRE
                     DYSEDGNAWDYFTHDQARSRAYRWGEDGIAGFCDDRQLLCLSLALWNGQDPILKERLF
                     GLTNQQGNHGEDVKELYYYIDAVPSHAYQKMLYKYVQAAYPYKSLVDENGRRRGTQAR
                     EFDLID"
BASE COUNT          484 a          875 c          878 g          524 t
ORIGIN      
        1 ggccggcgga tccgagggat cgcctccatg tcctccgccc gctcgaacag cttcatgcca
       61 aacggaggat tgcgcagctt cagcaggcgt tcgaggtcgg cgaccagctt cgcccagtct
      121 ttggttacgt tgggggcggt ggtggtagtg ggcgctttgg tcacgtttgg gtccctccgg
      181 tttcgcggca tgatcggcca aggcgggtcc gatgttaaga tcgggtggcg tcggagggcc
      241 gcgacgtctt ataccgacgt tccctccacg tcacagcgag ccgcacgcgt gatcgtcacc
      301 gacttccccc atgccattcg cgaaatcgaa catctgtgga tcccattgtc ggacggaacc
      361 cggctcgccg cgcgaatttg gctgccggac gacgcggatc gcaagccggt tcccgctatt
      421 ctcgaatatc ttccctaccg caagcgcacc ggcacctatg agcgcgacgc gctgacgcat
      481 ccctggttcg ccggccatgg ctatgccggc gtccgcgtcg acatccgcgg cagcggtgaa
      541 tccgacgggc tgctgttcga tgaatacgca ttgcaggagc aggatgacgc gctggaggtg
      601 atcgaatggc tcgcggcaca gtcctggtgc agcggcgcgg tcggcatgat ggggatctcc
      661 tggggcggct ttaacgggtt gcaggtcgcg gcacgacggc ctccggcttt gaaggcgatc
      721 atcacgctct gctcgaccga cgatcgctac cgggacgacg tgcactatat ggggggcgcc
      781 ctgctccgag cggggtttgg ctgggcctcg ttcctgttcg gcgccatgtg ccacccgccg
      841 gatccagcgc tggttggcga aagttggcgc cccacgtggc tcaaccggct gcagaatctc
      901 ccgttcttcc tggaattatg gctgcgccat cagcagcgcg acgcgtattg gcagcatggt
      961 tcggtgtgcg aggattacgc tgccatccaa tgtccggtgt tcgcggtcgg cggctggacc
     1021 gatggttaca ccaatgcgat cccacgcctc ctcgcccacc tgtcggtgcc tcgcaagggc
     1081 ctcattggtc cctgggcgca cggctacccg cacgtggcac ttcccggtcc tcagatcggt
     1141 ttcctgcagg aggcactgcg ctggtgggat cattggctga aggacatcga caccggcgtg
     1201 atggacgaac ccatgctgcg cgcctggatg acgcaaagcg tgcgtcctgc gccatttcac
     1261 gaggccctgc cgggacgctg ggtcgctgaa gccgagtggc cgccgtccgg gacaaagccc
     1321 ggtcgcctgc acctcaccga tgccggcctc gaggccatgg ctgggaacct gacgccgcgt
     1381 gccgtgtgct cgcccctgac cgtcggcaag gacggcggca gttggtgccc attcggcagc
     1441 agccccgatc aggctggcga tcaaaaggac gacgacgcgc agtctgtgct gttcgagact
     1501 tcgctgctcg acagcgacat ggagatcctc ggcgctgcgg tcgtcacact ggatgtcgca
     1561 tccgacaagc cgctggcaaa tttgattgtc cggctgtgcg acgtgcatcc ggacggggca
     1621 tcgctcaggg tcagctacgg cattctgaac ctcgcttttc gcgagggtta cgaccggcca
     1681 tcacggttgc agcccggtca acgctatcgg atccacattc aactcaacga cgcaggttcc
     1741 gtcattccat ccggccatcg catcaggctg gcgatttcca cgaactattg gccgatgatc
     1801 tggccggcgc ccgactctcc caccgtgacg gtgttcggcg gcagcgtcga tctgccggtt
     1861 cgcgccccaa aatcgtccga taacctgctg ccggtactgc ctgcgccgga aaccgcctcg
     1921 cccgagccga ccacccaatt gcctctgggc gttgtgcgga tcgaccgact gggcctggaa
     1981 cttggcagcg agggcgactt cagcgctcat atcgacccgg acgatccact cagcgcggtc
     2041 gtcgaaatgc gtcagtcgca gacagtgtca cgcgacgact ggcgaacccg gttcgaaacc
     2101 acgacccgac tatcttgctc gcgcgatgcg gtcaaactga acgcgaccat ggtcgcctgg
     2161 gacggtgaca cggaagtgtg ccgccgtgcg tgggaaaccc aggtgcctcg cgcgttccta
     2221 taggttgtgg atcgcccgcc gtcgattgaa ggaccctgat ggatgcagga aggttcaaag
     2281 tctgctgctg ccgatcccga acgccgacgt ctcgatgcca tgcgcaacgg caacgagaac
     2341 tggcgcggtt ggggaccgta cgtcagcgaa cgccagtggg gcaccgtccg cgaggactac
     2401 agcgaagacg gcaatgcctg ggactatttc actcacgacc aggcacgcag ccgcgcctat
     2461 cgctggggtg aggacgggat cgccggcttc tgcgacgatc gccaattgtt gtgtctgtcg
     2521 cttgcactgt ggaacggcca ggacccgatc ctgaaggagc ggttgtttgg cctgaccaac
     2581 caacaaggca accatggcga ggacgtgaag gaactttatt actacatcga tgcggtaccg
     2641 agtcacgcct atcagaagat gctctataag tatgtgcagg cagcgtatcc gtataagtcg
     2701 ctggtcgatg agaacggccg ccgccgtggc acccaggccc gcgaattcga cctgatcgac
     2761 a
//
LOCUS       DATAVD010001968         2975 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1674924, whole genome shotgun sequence.
ACCESSION   DATAVD010001968 DATAVD010000000
VERSION     DATAVD010001968.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2975
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1674924"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            392..1705
                     /gene="oxlT"
                     /locus_tag="VHX39_37460"
     CDS             392..1705
                     /gene="oxlT"
                     /locus_tag="VHX39_37460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012975803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxalate/formate MFS antiporter"
                     /protein_id="HEX3996891.1"
                     /translation="MTTSQTTATTPLAQAPSYRWIQLVMGIVCMAMIANLQYGWTLFV
                     DPIDQKFHWGRAAIQLAFTLFVVTETWLVPVEAWFVDKYGPRVVIMFGGVMITLAWVL
                     NSYADSLVLLYVAAIFGGIGAGSVYGTCVGNALKWFPDRRGLAAGATAAGFGAGAAIT
                     VVPIANMIATSGYQHAFFTFGIGQGVVVFILAFFLRKPSQAMPAKKKQLNLPQTKIDF
                     TPPQVLRSPIFWVMYLVFVMVAAGGLMAAAQIAPIAHDYKIATTPVSMLGFQMAALTF
                     AISLDRIFDGFGRPFFGWVSDTIGREHTMFIAFATAALMLLTLSMYGHIPIVFVLATA
                     VYFGVFGEIYSLFPATSGDTFGVKYATTNNGMLYTAKGTASLLVPLASIIAAHYGWQA
                     VFVVAVALNATAALMAIFVIKPMRRAFILGHEATAEATASNIKAA"
     gene            1983..2399
                     /locus_tag="VHX39_37465"
     CDS             1983..2399
                     /locus_tag="VHX39_37465"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEX3996892.1"
                     /translation="MKVGDILQKKTARVATVRMNETVGIAAQLMRASNISALVVKDVV
                     RTEGNTAVGMFTERDVVRAIAEHGAAGVNMKVSQLISVQQLVSCSSSDSIEHARHLMN
                     KNHIRHLPVIDNYSLIGVVSIRDISTAFDEAVAVPA"
     gene            2596..>2975
                     /locus_tag="VHX39_37470"
     CDS             2596..>2975
                     /locus_tag="VHX39_37470"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003086306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEX3996893.1"
                     /translation="MLKTRFTELVGVEHPIVQGGMQWVGRAELVAAVANAGALGFITA
                     LTQPTPEDLTREIARCRGLTDKPFGVNLTILPSIKPPPYAEYRQAIIESGIKVVETAG
                     NKPQEHVTEFKKHGVKVVHKCTSVR"
BASE COUNT          581 a          973 c          854 g          567 t
ORIGIN      
        1 accaaaaatg tcgaaaaccg ccgctctcag cctcgtgccc acccccagcc tgttcgaccg
       61 cctgctggcc tcgatcgatc gcctgctgat ggcgaacgcc gagatcgccc tccgtaacgg
      121 cgatctcccc tatttcggcc tctaacaggc cgcttaggaa cctccgctcc cagtcaggct
      181 tggcattttt gaaggcttcc tcccccgact aatggccccg gttcgccggg gccttttttt
      241 gtctacaatc ggctggccca ggcatgaacc gttatcgcga tagatgcgac accatgggca
      301 caaggtagga cttgcacgct ggcataatac ataccaaaat gcgcgaccgg taacgctccg
      361 tctctaaata gaagcgtgcc ttggaggaac catgaccaca tcacagacca ccgcaacgac
      421 gccgttggcc caagctccct cctaccgctg gatacagctg gtaatgggca tcgtctgcat
      481 ggcgatgatc gccaatctcc aatacggctg gaccctgttc gtcgatccga tcgaccagaa
      541 attccactgg ggccgcgccg cgatccagct tgccttcacc ctgttcgtgg tgacggaaac
      601 ctggctggtt ccggtcgaag cctggttcgt cgacaaatac ggtccgcgcg tcgtcatcat
      661 gttcggcggc gtgatgatca cgctggcctg ggtgctgaac tcctacgcgg actcgctggt
      721 gctgctttac gtcgctgcga tcttcggcgg catcggcgca ggctcggtgt atggcacctg
      781 cgtcggcaac gcgctgaaat ggtttcctga ccgccgcggc ctcgccgccg gcgccaccgc
      841 cgccggcttc ggcgcgggag cagcgatcac cgtggtgccg atcgccaaca tgatcgccac
      901 cagcggctat cagcacgcct tcttcacctt cggcatcggg caaggcgtcg tcgtgttcat
      961 cctggcgttc ttcctgcgca agccgtcgca ggcgatgccg gcgaagaaga agcaactcaa
     1021 tctgccgcag accaaaatcg acttcacccc gccgcaagtg ctgcgcagcc cgatcttctg
     1081 ggtgatgtac ctggtgttcg tgatggtcgc cgccggcggc ttgatggccg ccgcgcagat
     1141 cgcgccgatc gcccacgact acaagatcgc caccacgccc gtgagcatgc tcggcttcca
     1201 gatggcggcg ctgacgttcg cgatttcgct cgaccggatc ttcgacggtt tcggccgccc
     1261 gttcttcggc tgggtgtccg acaccatcgg ccgcgaacac accatgttta tcgccttcgc
     1321 cacggcggcg ctgatgctgc tgacgctgtc gatgtacggt cacattccga tcgtgttcgt
     1381 gctggcgacc gcggtgtatt tcggcgtgtt cggcgaaatc tacagcctgt tcccggcgac
     1441 aagcggcgac accttcggcg tcaaatacgc caccaccaac aacggcatgc tgtacaccgc
     1501 caagggcacc gcgtcgctgc tggtgccgtt ggccagcatc atcgccgccc attacggctg
     1561 gcaggcggtg ttcgtggtcg cggttgcgct caacgccacc gcggcgctga tggcgatttt
     1621 cgtgatcaag ccgatgcggc gcgccttcat cctcggccat gaggccaccg ccgaagcgac
     1681 tgccagcaac atcaaggccg cctgacggcg acacccttca tcctccagag gcgcattccg
     1741 gtgcgcctct ttttttgcct gcgacatctg ggataccaaa tgccatatcc acagttttga
     1801 cgagagaaag ccgggatcga tgggatcatg ccaacggcca gatacaataa acgtcaatat
     1861 tgctgccgct ttctctcata ccggccgcgg atctaatctg ctaccatgat ttgacaattg
     1921 gaatattgta taccacaatc acggacattg aagagtcggt gggtgagcag acggaggttg
     1981 cgatgaaagt cggagacatc ctgcaaaaga aaaccgcgcg cgtggcaacg gttcgcatga
     2041 acgaaaccgt gggtatcgcc gcacaactga tgcgtgccag caatatcagc gcgctggtcg
     2101 tcaaggacgt ggtgcgcacc gaaggcaata ccgcggtcgg catgttcacc gagcgcgacg
     2161 tggtgcgtgc catcgccgag cacggcgccg ccggcgtcaa catgaaggtg tcgcagctga
     2221 tctcggtgca gcaactggtg tcgtgcagct cgagcgacag catcgaacat gcccgtcacc
     2281 tcatgaacaa gaaccacatc cggcatctgc cggtgatcga caattacagc ctgatcggcg
     2341 tcgtcagcat ccgcgatatc tcgaccgcgt tcgacgaagc ggttgccgtg ccggcctgag
     2401 cgagcctcgc cgggcaaacc tggctcaagg ccgtttttgt ccgtctcgcg gaaacaacgc
     2461 cctgcttttg catgagggcg ttgccgtgcc ctgcccgatg caggatagac ttttgccggg
     2521 catgacgtca tccttaaccc cgaaaacctg caaatgccgg tgcgcgagcg gcggcaaatc
     2581 attcggggga aacacatgct caagacgcga ttcaccgaac tcgtcggcgt cgaacatccg
     2641 atcgtgcaag gcggcatgca atgggtcggc cgcgccgaac tggtggccgc ggttgccaac
     2701 gccggcgcgc tcggcttcat caccgcgctg acccagccga cgccggagga tctcaccagg
     2761 gagatcgcgc gctgccgcgg cctcaccgac aagccgttcg gcgtgaacct gaccatcctg
     2821 ccctcgatca agccaccgcc ttacgcggaa taccgccagg ccatcatcga gagcggcatc
     2881 aaggtggtcg agaccgccgg caacaagccg caggaacacg tcaccgaatt caagaagcac
     2941 ggcgtcaagg tcgtgcacaa atgcaccagc gtgcg
//
LOCUS       DATAVD010001969         6711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1860143, whole genome shotgun sequence.
ACCESSION   DATAVD010001969 DATAVD010000000
VERSION     DATAVD010001969.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 6711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6711
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1860143"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..682
                     /locus_tag="VHX39_37475"
     CDS             <1..682
                     /locus_tag="VHX39_37475"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEX3996894.1"
                     /translation="SLMAPWLQTLANYPVEAAGLIMAPRGIGTMAAMLTGGRLASRID
                     PRKLMAFGIVLLVWSIYDMTEWTPDVAQWRIMMTITIQGAGLGFLFIPLQVLAFATLP
                     GQYRTDGASLFSLFRNIGAAIGVSVTSSMLVHNTQIMHEQIGGQVTPFNRALTSGGAV
                     GHFWDPATRHGAAMLDQVINQQAQIVAYADDYKMMIFSTAPMLLLLLLMRRTRSAPGK
                     PEVMEPMD"
     gene            696..1173
                     /locus_tag="VHX39_37480"
                     /pseudo
     CDS             696..1173
                     /locus_tag="VHX39_37480"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            1366..1695
                     /locus_tag="VHX39_37485"
     CDS             1366..1695
                     /locus_tag="VHX39_37485"
                     /inference="COORDINATES: protein motif:HMM:TIGR01727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX3996895.1"
                     /translation="MYAGRVVERAPGPQIFDDPQHPYTPGLLGSIPKIEEDRDRLLAI
                     EGSVPSPYELPRGCRFHPRCVFAEPACADTSPDLREIASEHYAACRLAPLEDAVGEVS
                     AAHPPPA"
     gene            complement(1667..2500)
                     /locus_tag="VHX39_37490"
     CDS             complement(1667..2500)
                     /locus_tag="VHX39_37490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008944166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEX3996896.1"
                     /translation="MTTAAFEITPVGGNIGAELHGIDLSRDLPVPAVAAIRQALLDHL
                     VVFFRDQNLTSAQYIAFAERIGAPMRYPFVPGIEGFPEITPVLKRPEQTVNFGGVWHS
                     DTTYLPEPPMATFLLAGELPAFGGDTEFANQYLAYETLSDGLKSVLSGLRGVARSDKA
                     EASRTREDRAKKPGTGSEVLIAEHPVVRTHPETGRKALYVNIAHTAHFAGMTAEESLP
                     LLRFLWRHQTRPEFTCRFSWSPGALALWDNRCAQHQALNDYQGQRRLMHRITLAGDVP
                     R"
     gene            complement(2512..3435)
                     /locus_tag="VHX39_37495"
     CDS             complement(2512..3435)
                     /locus_tag="VHX39_37495"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011391122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEX3996897.1"
                     /translation="MPEPRILVIKLGALGNVVLAMNAFAAIRAFHATARISLLTTAPY
                     ADWLRQAPWFDEVLVDTRPAWWNLPGVLRLRSMLKSPGFRRVYDLQTSGRSSHYFRLL
                     PHSAKPEWSGIVASGSHPDRDPDRGHMHDLERQASQLRQAGIVTVPLADLSWCRGDIG
                     RFGLPRDFVVLVPGSAPHRPDKRWPAAQYQALAVALRAQGLTPIIVGTATEAAIARQI
                     PAALNLTGQTTFGDLADLARSARFAVGNDTGPMHLLAAAGCSAVVLFSNASDPRLCAP
                     RGRDVRVLRRPDLASLELEAVLQELPCPVAA"
     gene            complement(3479..4381)
                     /locus_tag="VHX39_37500"
     CDS             complement(3479..4381)
                     /locus_tag="VHX39_37500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014188049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="allantoinase PuuE"
                     /protein_id="HEX3996898.1"
                     /translation="MDRDLIGYGANPPNPNWPGAARLAVNFVLNFEEGSEPSIGDGDP
                     ASEWGLTEYMGANPGVQGRDLAAEGMFQYGSRVGFWRIMRLFAERSLPMTIFGCALAL
                     ERNPPAVAAIKAAGHDICCHGWRWEKHFELDEVTERARIARAVASIQTTMGERPLGWY
                     CRSGPGVNTRRLIVEEGGFLYDSDAYDDELPYWTRVGDKPHLVVPYTMSTNDSKFGRG
                     VFATADDFFHYCRDAFDYLYREGATKPKMLSIGLHMRISGHPARAAGLERLLDHIQQQ
                     RGVWVTRRLNIARHWAANFPAPQP"
     gene            complement(4520..5128)
                     /locus_tag="VHX39_37505"
     CDS             complement(4520..5128)
                     /locus_tag="VHX39_37505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996899.1"
                     /translation="MVGLTLSAEQIRSAPQDVRRWLEQEIMRTLGLQPGHEFAAQAAT
                     PPLVGCNVEEARAILSLVQNMLPVVSVFFELGRETNSIPVRAMRAFRLSDILRGSRLH
                     TPQQVIECLDILSQALRQVKGDSEAAFYGLDNQGHCLVAESTMRSILRLWQEIVAQHA
                     LQGDDQPAPVAEPHAEPPIPVTAPAQPYRIPGYTVTMPAAGQ"
     gene            complement(5261..>6711)
                     /locus_tag="VHX39_37510"
     CDS             complement(5261..>6711)
                     /locus_tag="VHX39_37510"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEX3996900.1"
                     /translation="ALAPCPPAEREWFARCLTAVEDIPLEAMLAGIDWQWETFPEYLA
                     TVERLPKALNYGAYIGHSALRMYVMGQRALTEAATADDVARMVHAVKEAVRAGAMGFS
                     SSRAGTHVTPDDTPVASRIAEWSEIDALVGAMAELDAGIFQIGPDVSSGPGQRAFLER
                     LRQVALQSGRPVMFGTIATRQGEAPNSYRYQLDYLDESIAAGARMFGQTTTKSINAIF
                     ALKSYLPFDVLPEWRALRALPLNEQKRRMADPAVRARLIADEARMKPRDNVFQGGGAA
                     TTDPRKPDYANLFAMKDVAWDDPTVESLARERGKHPVEVMLDLMLANEDQVFVQPLVN
                     EGRDDVLDMLRHPWTLTTFSDSGAHVCQEMGSSLQTHMLSYWVRAKQAFTLEQAVRKL
                     TFDNAAAWELNDRGLVRTGFAADLVLFDEQTVRPGMPVVESDLPGGARRLVQKAEGIA
                     ATIVNGTVAFENGVATGECGGRLLKGRGATSG"
BASE COUNT         1209 a         2132 c         2119 g         1251 t
ORIGIN      
        1 ctcgctgatg gcgccttggt tgcagacact ggcaaattac ccggttgagg cagcgggcct
       61 gatcatggcg ccgcgcggca ttggcacgat ggcggcgatg ttgaccggag ggcggctggc
      121 ctcgcgcatc gatccgcgca agctgatggc gttcggcatc gtgctgctgg tgtggtcgat
      181 ctatgatatg acggaatgga cgccggatgt cgcgcaatgg cggatcatga tgaccattac
      241 catccagggc gccggtctcg gttttctgtt cattccgctg caggttttgg cgtttgccac
      301 gctgcctggc cagtatcgca ccgatggcgc gtcgctgttc agcctgttcc gtaatattgg
      361 tgcagctatc ggcgtgtcgg taacgtcgtc gatgctggtg cacaatacac agattatgca
      421 cgagcagatc ggcggccagg tgaccccgtt caaccgggca ttgacgagcg gcggcgcggt
      481 aggccacttc tgggatccgg cgacacggca tggtgcggca atgctggatc aggtgatcaa
      541 tcagcaagcc cagatcgttg cttatgccga tgattacaag atgatgatct tttccacggc
      601 gccgatgcta ttgttgttgc tgctgatgcg gcggacccgg tcggcgccgg ggaaaccgga
      661 agtcatggag ccgatggatt gaacttccgc acggcatgag caacctgctc tccatcgaag
      721 gcctgcgcac cacgttccag acccagtccg gtgaggttgc cgcggtggac ggtgtcgatt
      781 tgtcgatcgc ccgcggacgc actctgggcg ttgtcggtga atccggctgc ggcaagtcgg
      841 cgctgtcgct gtcgatcatg cggccggtgc caccgcccgg ccgggtcgcg gcaggccgca
      901 ttctgtttga cggacgtgac ctcgccgctt tgtccgcagc ggagatgcgg gcgtatcgcc
      961 atgatctttc aggaaccggt gaccagcctg aacccggcgt ccaccgttgg cgatcagatc
     1021 accgaggcaa tgcaggccca tgaaggtcat gcctctgccg caacgttgcg cacccgcgcg
     1081 atcgcggcgc tggagcgggt gcgtatcccg gcagcggcgc gcgggttcga tgactacccg
     1141 catcaaatgt ccggctgcat gcgccagcac gtgatgattg cgatggcgct gtcctgcgcg
     1201 ccggatttgc tgatcgccga tgaaccgacc accgcgctgg atgtcaccgt gcaggcgcaa
     1261 atcctcgatt tgctgcggac tttgcagcag cagaccggca tggcgattat attgatcacg
     1321 catgatcttg gtatcgttgc cgaaatggcc gacgagatcg cagtgatgta tgccggccgt
     1381 gtggttgagc gcgcgcccgg tccgcagatc tttgatgacc cgcagcatcc ttatacgcct
     1441 ggcctgttgg gttcgatccc gaagatcgag gaggatcgtg accggttgct ggcaatcgag
     1501 ggttccgtcc cgtcgccgta cgagttgccg cgcggctgcc gtttccatcc gcgttgcgtg
     1561 ttcgccgagc ccgcctgcgc cgataccagc cctgacctgc gagagatcgc atccgaacat
     1621 tacgctgcgt gccggctggc gccgctggag gatgcggtgg gtgaggtcag cgcggcacat
     1681 cccccgccag cgtaatgcga tgcatcagcc gccgctgccc ctgataatcg ttgagtgcct
     1741 gatgctgcgc gcaacgatta tcccacaacg ccagtgcgcc cggtgaccag gaaaaccggc
     1801 aggtgaactc cggccgtgtc tgatgccgcc acagaaatcg cagcagcggc aggctctctt
     1861 ccgcggtcat gccggcgaaa tgggcggtat gcgcgatatt gacatacagc gctttgcggc
     1921 cggtttcggg gtgcgtgcgt actacgggat gttccgcaat caaaacctca ctgccggtgc
     1981 cgggcttttt ggcgcggtcc tctcgggtgc ggctggcctc ggccttgtcc gaacgagcta
     2041 ccccgcgcaa cccggacagc accgacttca ggccgtccga caacgtttca taagcgagat
     2101 attgattggc gaactcggta tcgccgccga atgccggcag ttcgccggcc agcaagaagg
     2161 tcgccatagg cggctccggc aaataggtcg tatcagagtg ccagacgccc ccgaaattga
     2221 ccgtctgctc ggggcgcttg aggaccggcg tgatctcggg aaacccttcg atcccgggca
     2281 cgaacgggta gcgcatgggc gcgccgatcc gttcggcaaa ggcaatatat tgcgcagatg
     2341 tcaggttctg atcacggaag aataccacga gatggtcgag caatgcctgg cggattgccg
     2401 ccacggctgg cacgggcaaa tcgcgcgaga ggtcgatgcc atgcagctct gcgccgatgt
     2461 tgccgccgac cggggtgatt tcgaaagccg ctgttgtcat aggctatctt ctcacgcggc
     2521 cactgggcag ggcaactcct gcaatacggc ttccagctcc agcgatgcga ggtcaggccg
     2581 tcgcaatacg cgcacatccc gaccgcgcgg tgcgcacaac cttggatcgg acgcattcga
     2641 gaacagcacc actgcggaac agccagccgc tgccagcagg tgcatcggcc cagtgtcgtt
     2701 gccgacggca aagcgggctg agcgggcgag gtcggcgagg tcaccgaacg tggtctggcc
     2761 ggtcaggttc agtgcggcgg gaatctggcg cgcgatcgct gcctcggtcg cggtcccgac
     2821 gatgatcggc gtcaacccct gcgcgcgcaa cgccactgcg agcgcctgat actgtgctgc
     2881 cggccaacgt ttgtccggac ggtgcggcgc gctgccgggg accagtacga cgaaatcccg
     2941 cggcaggccg aagcggccga tatcgcctcg gcaccaggac aaatcggcca gcggaactgt
     3001 aacgatcccg gcctggcgaa gctggctggc ctgacgctcc aggtcgtgca tatgtccccg
     3061 gtcagggtca cgatcgggat gcgagccgct tgctacgatc ccagaccatt caggtttcgc
     3121 cgagtgcggc aaaagtcgaa aataatgcga cgatcgcccg gaggtctgca aatcataaac
     3181 ccgcctgaat cctgggcttt tcaacatact acgcagccgc aacacgcccg gaaggttcca
     3241 ccaggcgggc cgcgtgtcga ccaggacctc atcgaaccaa ggtgcctggc gtagccaatc
     3301 ggcgtatgga gcggtcgtca acaggctgat ccgtgccgtc gcatgaaacg cgcgtatggc
     3361 ggcgaacgca ttcatcgcca ggaccacgtt gccaagcgcg cccagtttga tcaccagaat
     3421 cctgggttca ggcattcggt cggtgccaca acgcatgatc ggccggcatg accgcgcctc
     3481 agggctgcgg ggcggggaag ttggcagccc agtgacgggc aatgttcaac cggcgggtga
     3541 cccaaacgcc gcgctgctgt tggatgtgat caagcaaccg ttctaatccg gccgcacgcg
     3601 cgggatggcc agagatacgc atgtgcagac cgatcgagag catcttcggc ttcgtggcgc
     3661 cctcacggta gaggtaatca aacgcgtcgc ggcagtaatg aaaaaagtcg tctgcggtcg
     3721 caaacacgcc gcggccgaat ttcgagtcgt tggtcgacat cgtgtagggc acgaccagat
     3781 gcggcttgtc cccgacccgg gtccagtacg gcagctcatc gtcgtaagcg tcggagtcgt
     3841 agaggaaccc gccctcctcg acgatcagcc ggcgcgtgtt cacgcctggc ccggagcggc
     3901 aataccagcc aagcgggcgt tcgcccatgg tggtctggat cgaggcgaca gcgcgcgcga
     3961 tgcgggcgcg ttccgttact tcgtcgagtt cgaagtgctt ttcccagcgc cagccgtggc
     4021 agcagatgtc atgaccggcg gctttgatgg cggcgaccgc gggcgggtta cgctccagcg
     4081 ccagcgcgca accgaagatg gtcatcggca gggagcgctc ggcgaacagg cgcatgatgc
     4141 gccagaagcc aacgcgggaa ccgtactgga acatgccctc ggcagcgagg tcgcggcctt
     4201 gcacgcccgg gttggcgccc atgtactcgg tgaggcccca ttcggaggcg ggatcgccat
     4261 cgccgatcga cggctccgac ccttcctcga agttgagcac gaagttaacc gccaggcgcg
     4321 cggcgccggg ccagttgggg ttgggcgggt tggcgccgta accgatgaga tcgcgatcca
     4381 tggagggtag tttagctcga aatgaccgcc gcgtcatgtc ggggctgcca accctggctg
     4441 acgggagggc gtcgaacccg gttttccgtc cgaagcgtga tctgattgcg tcgcgggccc
     4501 ggtgcagccg gcggaattgc tattgaccgg ccgcgggcat cgtaacggtg tagcccggaa
     4561 tccggtacgg ttgggctggc gcagtgacgg ggatcggcgg ctcggcgtgc ggttcggcca
     4621 cgggtgccgg ctggtcgtcg ccctgcaacg catgttgcgc cacgatctcc tgccataacc
     4681 gcaggatgct gcgcatggtg gactctgcga ccaggcaatg gccctgatta tcgagcccgt
     4741 agaacgccgc ttcgctgtca ccttttacct ggcgcagtgc ctgcgacaga atgtcgaggc
     4801 attcgatcac ttgttgcggt gtgtgcagcc ggctgccgcg caggatgtcg ctcagacgga
     4861 acgcccgcat ggcgcggacg ggaatgctgt tcgtctcgcg gcccagttcg aagaaaacgc
     4921 tgacgaccgg gagcatgttc tgcaccagtg acaggattgc gcgcgcctcc tcgacattgc
     4981 agccaacgag cggcggcgtg gcggcctgtg cggcaaactc gtggccgggc tgcaggccaa
     5041 gggtacgcat gatttcctgc tcgagccagc gacgcacgtc ttgcggcgcg ctgcggattt
     5101 gttcggcgga cagggtgaga ccgaccatcg gttgttcctc tcgggtgctg atcccgggat
     5161 tatccgctga tcgttaagca cggcattgat ccgaatcaat ctcagccggg cacctggcaa
     5221 gatgcgcaac tgcttccttt gtgcttcccg cagcctggct ctaaccggat gtagcgcctc
     5281 tgcccttcag cagccgcccg ccgcattctc cggtcgccac cccgttctcg aacgccactg
     5341 tcccattgac gattgttgcc gcgatcccct ccgccttctg caccaaccgc cgcgcgcctc
     5401 ccgggagatc gctttcaacc accggcatcc ccggccgcac cgtctgttca tcgaacagca
     5461 ccagatcggc ggcaaacccg gtgcgcacca gaccgcggtc gttcagctcc cacgccgccg
     5521 cgttatcaaa tgtcaacttc cgcacggcct gttccaacgt aaaggcttgc tttgcgcgca
     5581 cccagtaact caacatatga gtctgcaacg acgaacccat ttcctggcac acatgcgccc
     5641 cggaatccga gaacgtcgtc aatgtccagg gatgccgcaa catgtccagc acatcgtcgc
     5701 gtccctcgtt caccagaggt tgcacgaaca cctgatcctc gttcgccagc atcaggtcga
     5761 gcatgacctc caccggatgt ttcccgcgtt cccgcgccaa cgactcaacc gtcggatcgt
     5821 cccaggcgac atccttcatc gcgaacaggt tggcataatc cggtttcctt gggtccgttg
     5881 tcgccgcgcc gccaccctgg aacacgttat cgcgcggctt cattcgggcc tcgtccgcga
     5941 tcaaccgagc ccgcacggcc ggatccgcca tgcgtcgctt ctgctcgttc agcggcaagg
     6001 cgcgcaacgc acgccattcc ggtaacacat cgaacggcaa atacgacttc agcgcgaaga
     6061 tcgcattgat cgatttggtc gtcgtctggc cgaacatccg ggctccggcc gcaatgctct
     6121 cgtccagata atccaattga tagcgatacg aattcggtgc ctcgccctgg cgcgtggcaa
     6181 tcgtgccgaa catcaccggc cggcccgatt gcagcgcgac ctgacgcagt cgctcaagaa
     6241 aggcgcgttg tcccggaccg ctcgatacat cggggccgat ttgaaaaatc cccgcatcca
     6301 gttccgccat cgcgccgacc agagcgtcga tctcgctcca ttctgcgatc cggctggcca
     6361 ccggcgtgtc atccggcgtg acatgtgtgc cggcgcgaga gctggagaat cccatcgctc
     6421 cagcccgcac cgcttccttg accgcatgca ccattcgggc gacatcgtcc gcggtcgccg
     6481 cctcggtgag tgcgcgctgc cccatgacgt acatgcgcaa agcggaatgc ccgatatacg
     6541 caccgtagtt cagagccttg ggcagccgct cgaccgtcgc aagatattcc gggaacgttt
     6601 cccattgcca atcaataccg gcgagcatgg cttccagcgg gatatcctcc accgcggtga
     6661 gacagcgggc aaaccactcg cgttctgccg gcgggcaggg ggcgagagca a
//
LOCUS       DATAVD010001970         2968 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1487318, whole genome shotgun sequence.
ACCESSION   DATAVD010001970 DATAVD010000000
VERSION     DATAVD010001970.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2968
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1487318"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(7..147)
                     /locus_tag="VHX39_37515"
     CDS             complement(7..147)
                     /locus_tag="VHX39_37515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996901.1"
                     /translation="MLRWRGRGRDRMMQGGEPVESVLPGLQDEVNAVLKRERGKAEAM
                     RK"
     gene            complement(319..858)
                     /locus_tag="VHX39_37520"
     CDS             complement(319..858)
                     /locus_tag="VHX39_37520"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEX3996902.1"
                     /translation="MGRETLWKEAGLDPAKDFPATWEAMPAVAERLTGRDANGNPVRR
                     GFGFDWPSGPVFWLTLTTMMHQNGGNLIDEDSYTATFSNPTGVKVLRFLTDWTNKHKL
                     GGPQYNDTRTAFLGGKLATDCSFGIWGIPQMTAAKIDYTVHPAPRFAGGADEGFDAYA
                     FYMAVNARSPSPTQKAAWT"
     gene            complement(932..1510)
                     /locus_tag="VHX39_37525"
     CDS             complement(932..1510)
                     /locus_tag="VHX39_37525"
                     /inference="COORDINATES: protein motif:HMM:NF022586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2889 domain-containing protein"
                     /protein_id="HEX3996903.1"
                     /translation="MPDEPMTEQSSPSGDVIREEIHFRRIDMRGYRRSDGLFEIEGRV
                     TDRKPFEFKPGGDGECVPPNEPIHDMGVRLVFDEEMVIQDVTTFTDSAPYPVCFGGGL
                     ALRSLKGVRMGSGWNREVRSRLAGASSCTHLMELLIPMATTAIQSLSPQRNRLPDRLD
                     ASGRPVKIDSCYAYGATTDVVRRRWPAFHRPT"
     gene            1537..1998
                     /locus_tag="VHX39_37530"
     CDS             1537..1998
                     /locus_tag="VHX39_37530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996904.1"
                     /translation="MSMIGQYRTSFAIWRAGSHRSRGADEPTIFQYRQNLIYLGSDGH
                     SHSVGRLCAGKVAFWRQETERQQPNESRLMAIIYVRTFDTVGGADVPGTGLRTGSPRT
                     AIEHANTLNSAGSPPGHVTRILYTGSFVDDAFTELLQLAQEHGLQVDSGQE"
     gene            1999..2574
                     /locus_tag="VHX39_37535"
     CDS             1999..2574
                     /locus_tag="VHX39_37535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996905.1"
                     /translation="MPDQVKHRVHRPNIADDDWQPVMVPRSNKKLVPISPDRVRRLRE
                     HLAEALLAMRARATSAPPLKPAPDGFTARVVQTACTLCRGWCCRNGADDAFLDDRTMA
                     RAAGDRPDLDAAGLLDLYIGRVPDAAFENSCIFHGKQGCTLTHALRSDVCNAYFCGGL
                     LAFMTDRDPPTATRIFAGEGDTLRTSSVLSP"
     gene            complement(2577..>2968)
                     /locus_tag="VHX39_37540"
     CDS             complement(2577..>2968)
                     /locus_tag="VHX39_37540"
                     /inference="COORDINATES: protein motif:HMM:NF024802.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEX3996906.1"
                     /translation="PRSPRDRAVCLEWCFFVISELDATSLYVMRRHGDLKHIYGDAPT
                     ANVAARDYFAAQMRSVDRALEDGRGFITGVRFTAADIILSTCLSWAVRYGVPVSEAAA
                     AYNSRLTARPAFMRAAEQNRAPEETAS"
BASE COUNT          556 a          968 c          861 g          583 t
ORIGIN      
        1 atgacgttac ttccgcatcg cctcggcctt gccgcgctcg cgtttcagca cggcgttcac
       61 ctcgtcctgc aggcccggca aaacgctctc gaccggttcg ccgccctgca tcatgcgatc
      121 gcgcccgcgc ccgcgccagc gcagcatgac atcgatcgcc tggccatagc cgacgacgcg
      181 gtgcgaattt cgccttcttc aactcattgc ggaacgcgag gctgttggcg tctgttgcct
      241 tggcaacaac ctcggcgcgc ggaacgaaaa gcccggcgcc ggcaaacaaa cgttcggcct
      301 gatcggtgta gtaacggact aagtccaggc ggctttttgc gttggggagg gggagcgggc
      361 attgaccgcc atgtagaaag catacgcgtc gaaaccttca tccgcgccgc cggcaaagcg
      421 cggcgccggg tgcacggtgt agtcaatctt tgcggcggtc atctgcggaa taccccagat
      481 gccgaagctg caatcggtcg ccagcttgcc gccgagaaac gccgtgcggg tgtcgttgta
      541 ttgcggaccg ccgagcttgt gcttgttcgt ccaatcagtc aggaaccgca gcactttgac
      601 gcccgtcggg ttactaaagg tcgctgtata gctgtcctcg tcgatcagat tgccaccatt
      661 ctgatgcatc atcgtcgtca acgtcagcca aaacaccggt ccactgggcc aatcgaaacc
      721 gaagccgcgg cgcaccggat tgccgttggc gtcgcggccc gtgagtctct ccgccaccgc
      781 cggcatcgcc tcccacgttg ccgggaagtc cttggcagga tcgaggcccg cctccttcca
      841 cagcgtttct ctccccatgc ttacttcgcg ccgtttgagc tggcgtcagg ctgttaggca
      901 atgcctgcat gaggcgcaag cataccccca atcacgtcgg acgatgaaac gcgggccacc
      961 gacggcgcac cacgtccgtc gtggcgccat aggcgtaaca actgtcgatc ttcaccggtc
     1021 gcccggaggc atccagcctg tccggcagcc gattcctctg cgggctcaat gactggatgg
     1081 cggttgtagc catcgggatc agcagttcca tcagatgagt gcaactgctc gcgccggcca
     1141 accggctgcg gacttcccgg ttccagccgc tgcccatccg gacacccttc agcgagcgca
     1201 gcgccaaccc gccaccgaaa cacacggggt aaggagccga gtccgtgaat gtggtgacat
     1261 cctgaatgac catctcttca tcgaacacca ggcggacacc catgtcatga atgggctcgt
     1321 tgggtggcac acattcgccg tcccctccgg gtttgaactc gaacggcttg cgatcggtga
     1381 cacggccctc gatctcgaac agaccgtcgc tgcggcggta gccacgcatg tcgatgcggc
     1441 ggaagtggat ttcctctcgt atgacgtcac cggatggcga tgattgctcg gtcatgggtt
     1501 cgtccggcat ggcgctgttt ttccgtcacg gtgctgatgt cgatgatcgg ccagtatcgc
     1561 acatccttcg ccatttggcg cgctgggtcg catcgcagcc gcggcgcgga tgagccgacg
     1621 attttccagt atcgtcagaa tttgatatac ctcggcagtg acggccattc ccattctgtc
     1681 ggtcggctct gtgccggtaa agtcgcgttt tggcggcagg agaccgaacg gcaacaaccc
     1741 aacgaaagcc ggctcatggc tataatctat gtccgaacct ttgataccgt cggcggcgcg
     1801 gacgtgcccg gcaccggcct gcgcacgggt tcaccgcgga ccgccatcga acatgccaac
     1861 acactgaaca gtgctggttc gccccccgga catgtcacca gaattttgta taccggcagt
     1921 tttgtcgatg atgcgtttac ggaattgctg cagctcgctc aggagcatgg actgcaggtt
     1981 gacagtggtc aggaatagat gcccgatcag gtaaagcacc gcgtgcaccg cccgaacatt
     2041 gctgatgacg actggcagcc ggtgatggtg ccgcgaagca acaaaaagct cgtcccgata
     2101 tcgcccgacc gcgtgcgtcg cctgcgcgag caccttgccg aggcgttgct tgcgatgcgc
     2161 gcccgagcaa catcggcacc gcccctcaag ccagccccgg atggctttac cgcccgcgtc
     2221 gtacaaaccg cctgcacgct gtgccgtggg tggtgttgtc ggaacggcgc ggacgatgcc
     2281 tttctggatg atcgaacgat ggcacgtgcc gccggcgaca gaccggacct ggatgcagcc
     2341 ggactgctcg acctttacat tgggcgggtt cccgacgccg ccttcgaaaa ctcctgcatt
     2401 tttcacggca agcaaggctg taccctgacc cacgcgctgc gttccgacgt gtgcaacgct
     2461 tacttttgcg gtggcttgct tgctttcatg actgaccgcg accctcctac tgcgaccagg
     2521 atttttgccg gtgagggcga cacgttgcgc acctcatccg tcctgtcacc atagattcag
     2581 cttgcggttt cctcaggcgc gcggttctgc tctgccgccc gcatgaacgc cggacgcgcc
     2641 gtaagacgtg agttatacgc tgcggccgcc tccgaaactg gcacgccgta acgaacggcc
     2701 cacgacaggc aggtcgacaa aataatatct gcggccgtaa atcgaacccc ggtaataaac
     2761 cctcgaccat cctccagcgc ccgatcgacg ctgcgcattt gcgccgcgaa ataatcccgt
     2821 gccgcgacat tcgccgtcgg cgcgtcgccg tagatatgtt tcagatcgcc atgccgccgc
     2881 atcacataaa gcgacgtggc gtcaagttcg ctgatcacaa agaagcacca ctccaggcac
     2941 accgcccggt ctcgaggcga gcgtggca
//
LOCUS       DATAVD010001971         2339 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3346889, whole genome shotgun sequence.
ACCESSION   DATAVD010001971 DATAVD010000000
VERSION     DATAVD010001971.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 2339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3346889"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..195
                     /locus_tag="VHX39_37545"
     CDS             <1..195
                     /locus_tag="VHX39_37545"
                     /inference="COORDINATES: protein motif:HMM:TIGR01727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEX3996907.1"
                     /translation="KRSRLTEIKGMVPSLANLPQGCTFAARCGFATDQCRTTYPPLEM
                     YRPEHWVACWHADAMLGDHA"
     gene            192..1196
                     /locus_tag="VHX39_37550"
     CDS             192..1196
                     /locus_tag="VHX39_37550"
                     /EC_number="7.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019014107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HEX3996908.1"
                     /translation="MSPLLEVQDLKKHFPVHRGVFSRTAGFVHAVDGVSFHIDPGETL
                     GLVGESGCGKSTAGRTLLKLLEPTGGTIKVDGHDITHLDREGMLPYRRRMQMIYQDPY
                     ASLNPRMSAGDIVGEPLIIHGDGVNRMQRREKVAALFQRVGLRPALMESYPHEFSGGQ
                     RQRIGIARALALDPELIIGDEPVSALDVSIQAQIVNLMMDLQDELKLSFLFIAHDLGV
                     VEHISHRVAVMYLGRIVEMTDKTTLFEMPLHPYTEALLSAVPLARARSRGRNRVILSG
                     DVPSPINPPSGCHFHARCRYAMARCRVESPPLRELLPGHVAACHLHDAGVAFPLAKAA
                     "
     gene            1307..2212
                     /locus_tag="VHX39_37555"
     CDS             1307..2212
                     /locus_tag="VHX39_37555"
                     /inference="COORDINATES: protein motif:HMM:NF025597.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYF domain-containing protein"
                     /protein_id="HEX3996909.1"
                     /translation="MSDASNQIYYYDQSKNRQGPLSEADFRQRIADGTVRRSSMIWYA
                     GMADWRAAGEVDKFAAQFANQTPSQRPAPAVSAPIAPVAEAAAMSRVPTGALTASLPV
                     WGLFGRCLLLAIGSIFVIPAPWTATGFYRYVSTHTALPGGKRFTFAGEAGDIWIVFVA
                     IAALGLVGLVIPFGNLFALPPTWALTVQVLRWFCAKLGAEYDSVKLSFIGGIWNYIGW
                     SALLYLSFITIIGWAWVFAAMMRWICRHVSGTVRFEFRGTGLAILWRGLVMGLLGILV
                     IPLPWLVRWYMTWFISQIHVIPGDA"
BASE COUNT          419 a          692 c          728 g          500 t
ORIGIN      
        1 aaacgatcgc ggctgactga aatcaaaggc atggtgccat cccttgccaa ccttccccaa
       61 ggctgcacct tcgcggcccg ttgcggcttc gccacggatc agtgccgcac cacctatcca
      121 ccgttggaaa tgtaccggcc cgagcactgg gtcgcctgct ggcacgccga cgcaatgctg
      181 ggagaccacg catgagtccg ttgctggagg tgcaggattt aaaaaagcat ttcccggtgc
      241 accgaggcgt gttctcgcgt accgcaggat ttgttcatgc cgtcgacggg gtttcgtttc
      301 acatcgatcc tggtgaaacg ctcggcctgg taggcgaaag cggctgtggc aaatcgaccg
      361 ctggccgaac gttgctgaaa ctgctggagc cgaccggtgg aaccatcaag gtcgatggtc
      421 acgatatcac ccatctcgat cgcgagggca tgctgccata ccggcgccgc atgcagatga
      481 tctatcagga cccgtacgcg tcgctcaacc cgcgcatgtc ggcgggcgac atagtcggtg
      541 agccgttgat catccacggc gacggtgtca accgaatgca gcgccgcgaa aaagtcgccg
      601 cgctgttcca gcgcgtgggt ttgcggccgg cactgatgga atcgtatccg cacgaattct
      661 ccggcgggca acgccagcgc atcgggattg cacgcgcact ggcgctcgat ccggaactga
      721 tcattggcga cgaaccggta tccgcactgg acgtttccat tcaggcacag atcgtcaacc
      781 tgatgatgga tttgcaggac gaactgaaac tgtcgttcct gttcatcgct catgatctcg
      841 gcgtggtgga acacatcagc caccgggtcg cggtcatgta tctcggccgg atcgtcgaga
      901 tgacggataa aacgacgttg ttcgagatgc cgctgcatcc ctataccgag gcgctgctgt
      961 ctgccgtgcc gctggcacgc gcgcggtcgc gaggacgcaa tcgggtgatc ctgagcggcg
     1021 acgttccgag cccgatcaat ccaccgtccg ggtgtcattt tcacgctcga tgccgctatg
     1081 cgatggctcg ctgccgggtt gaatctccgc cgttgcgcga gttgcttccg ggccatgttg
     1141 ccgcttgtca cctgcatgac gcaggtgtgg catttccgtt ggcgaaggct gcgtaggtcg
     1201 gtggaacaaa tcgccacttc caggcaacga ccgatttggt tcaggatcag gctcccgccg
     1261 ggataaggtc aggggacggg cggccaagaa cgcagggggt ttcgcaatgt ccgacgcatc
     1321 caaccaaatt tattactacg atcagtcgaa gaatcggcag ggcccgcttt ctgaagccga
     1381 tttccgccag cgaatcgccg acggaaccgt caggcggagt tcgatgatct ggtacgccgg
     1441 gatggccgat tggcgcgccg ccggggaggt ggacaaattc gctgcgcagt tcgcgaacca
     1501 gacgccgtca caacggccgg cgccggctgt ttccgcgcca atcgcgccag tcgcagaagc
     1561 ggcggcgatg agcagagttc cgaccggcgc attgaccgct tcgctgccgg tctggggttt
     1621 gtttggacgc tgcctgctgt tggcgatcgg ctcgatcttc gtcatcccgg cgccgtggac
     1681 tgcgacaggg ttctaccgct acgtcagcac acataccgcc ctgcccggcg gaaagcgttt
     1741 taccttcgca ggagaggctg gcgacatctg gatcgtattc gtagcgattg cggcgcttgg
     1801 cctggtcgga ttggtcattc cgttcggtaa tctctttgcc ctgcctccga cctgggcttt
     1861 gaccgtccag gttctccgtt ggttctgtgc gaagctcgga gcggaatatg attccgtaaa
     1921 actcagcttc atcggcggga tctggaacta catcggctgg agtgccctgc tctatctttc
     1981 attcatcacg atcatcggtt gggcctgggt tttcgcagcc atgatgcgct ggatctgccg
     2041 gcatgtgagc ggaacggtac gcttcgaatt tcgcggcaca ggacttgcta ttttgtggcg
     2101 aggccttgtc atggggttgc tcgggattct ggtgatcccg ctgccctggc tcgtgcgctg
     2161 gtacatgacc tggttcatat ctcagatcca tgtgatccca ggcgacgcgt gaccgatcgg
     2221 aatcccggcg cggaacaggt ccggttcgaa cgtctgtgcg cgcgacgcgg ttccattaat
     2281 cccggagatc gcggagtgcc cggaggacgc ggagatgctc attggcgttg ccggtcctc
//
LOCUS       DATAVD010001972         1720 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_1488341, whole genome shotgun sequence.
ACCESSION   DATAVD010001972 DATAVD010000000
VERSION     DATAVD010001972.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1488341"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            185..1348
                     /gene="metK"
                     /locus_tag="VHX39_37560"
     CDS             185..1348
                     /gene="metK"
                     /locus_tag="VHX39_37560"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009541202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEX3996910.1"
                     /translation="MSDRFLFTSESVTEGHPDKIADQVSDAILDACLEQDPYSRVAAE
                     TLTATGLVVIAGEITTKAYVDFQSLVRGVVAAIGYDNALYGFDSNTCAVISTINKQSG
                     DIAQGVDTGGAGDQGMMFGYASNETKELMPAPISLAHKLTRRLTEVRKSGKLPYLRPD
                     GKSQVTVEYDENGKPARIDAVVISSQHSEMVSNDDLHSDILKHVIQAVLPSAWLDEHT
                     KYHINPTGRFVIGGPMGDTGLTGRKIIVDTYGGAGRHGGGAFSGKDPTKVDRSAAYMA
                     RHIAKNIVAAGLADRCEVQLAYAIGVPEPVSVLVDTFGTGQLSAAQLTALVRKNFSLT
                     PKGIIESLNLRRPIYQKTAAYGHFGRTEPEFTWEATDKAAALAEQAGLLTAAK"
     gene            1473..>1720
                     /locus_tag="VHX39_37565"
     CDS             1473..>1720
                     /locus_tag="VHX39_37565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEX3996911.1"
                     /translation="MRIPVVLAVLLSTAALAAGQTTTPWNYYGKTGPLGWGKLDPAYR
                     LCSQGHEQSPIDVHGAHLNKALQPIEFHYMAGPVRLENT"
BASE COUNT          364 a          505 c          544 g          307 t
ORIGIN      
        1 tgcacggccc gggggcttcc tccgcgaagg ctgaattcaa acagaactca gcattttccc
       61 caatcggtct cggcggcagg gcaagaaacc gatgttgcga gccgggtaac gagtggcgga
      121 gaagcgcttg cggactggcg acggcaggct atcctaaaac ccttgggtgg ggaggaatac
      181 gaagttgagt gatcgtttct tgtttacttc cgagtctgtg accgaaggcc atcctgacaa
      241 gatagccgat caggtctccg atgccattct ggatgcctgc ctggagcagg atccctacag
      301 ccgcgttgca gcggagactc tgaccgcgac cggcctggtg gtcatcgcgg gcgaaatcac
      361 gactaaagcc tacgtcgatt tccagtccct ggtgcgcggc gtggtagccg cgatcggtta
      421 tgacaacgcg ctttacggct ttgactcgaa tacctgcgcg gtgatctcga ccatcaacaa
      481 gcagtccggc gatatcgccc agggcgtgga tacgggtggc gccggcgatc agggcatgat
      541 gttcggttat gcctccaacg aaaccaagga gctgatgccc gctcccattt cgctggcgca
      601 caagctgacc cgccggctca ctgaggtccg caagagcggc aaactgcctt acctgcgtcc
      661 ggatggcaag agccaggtca cggtggagta cgacgagaac ggcaagccgg cgcgcatcga
      721 tgccgtggtt atcagcagcc agcattccga gatggtctcg aacgacgacc tgcattccga
      781 cattctgaag cacgtgattc aggccgttct cccctcggcg tggctcgacg agcacaccaa
      841 gtaccacatc aatccgaccg gccggtttgt aattggtgga ccgatgggcg acaccggact
      901 gacgggccgt aagatcatcg tggataccta cgggggtgcc ggccgtcatg gcggcggcgc
      961 gttcagcggc aaagatccga ccaaggtgga ccgttctgcg gcgtacatgg cgcggcacat
     1021 cgcgaagaat atcgtcgccg ccgggctggc ggatcgctgc gaagtgcagt tggcgtatgc
     1081 catcggcgta cccgagccgg tcagcgtgct ggtggataca ttcgggaccg gacagctgag
     1141 cgccgcgcaa ctgaccgcat tggtgcgcaa gaacttctcg ctgacgccca agggcatcat
     1201 cgagagcctc aacctgcgcc gtccgatcta ccagaagaca gcggcctacg gacattttgg
     1261 gcggaccgaa ccggagttca cctgggaggc caccgacaag gcggcggctc tggcggaaca
     1321 ggcgggcttg ctcactgcgg ccaagtagct gatcgagaac cacagtttgt cgaaaggacc
     1381 cttcgcgcgg aagggtcctt tcttttgcgc cgggccagca gtccaactag aatgcagcgg
     1441 ggaacataca cagatcggca agggagaaag cgatgcgtat tcctgtagtt ttggctgttc
     1501 tgctgagcac ggctgccctg gcggcggggc aaacaacgac gccgtggaac tattacggca
     1561 agacggggcc cttgggatgg ggcaagctcg accccgccta tcggctctgc tcacaaggac
     1621 acgagcagtc gccaatcgac gtgcacggcg cccacctgaa caaagcgcta cagcccatcg
     1681 agttccatta catggcggga ccggtaaggc tggaaaatac
//
LOCUS       DATAVD010001973         3264 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3349027, whole genome shotgun sequence.
ACCESSION   DATAVD010001973 DATAVD010000000
VERSION     DATAVD010001973.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 3264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3264
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3349027"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(424..1188)
                     /gene="cysQ"
                     /locus_tag="VHX39_37570"
     CDS             complement(424..1188)
                     /gene="cysQ"
                     /locus_tag="VHX39_37570"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007421472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HEX3996912.1"
                     /translation="MTDEALLELAAGLALRAAEVILAIRARGFAVSRKADRSVVTEAD
                     QAAETLIVAGLLAAAPEIPVVAEEAVAGGAIVAASPLFWLVDPLDGTREFTDGSDDFA
                     VNIGLVRDHRIRLGVVGVPATGELFGGIVGVGAWKRHRGIETRVHARSAPAEGLTVLA
                     SRHHGDSARLAAFLAGRTVAKTMNFGSSLKFCRLAEGIADLYPRFGRTMEWDTAAPQA
                     VLEAAGGTVCTLDGAPLLYGKPGWENPFFVCTGRPS"
     gene            complement(1185..>3264)
                     /locus_tag="VHX39_37575"
     CDS             complement(1185..>3264)
                     /locus_tag="VHX39_37575"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEX3996913.1"
                     /translation="HADKIVEMPPPFNWSRFNNAAVAASDGEYLLFLNDDIEIIQPDW
                     LDAMLEAATWSGTGIVGARLLYPNRSVQHAGMFLGDGMGRHAFRHADQHDPGYFGLAQ
                     TTREVTAVTGACMLIRREVFETLGRFDESHDVINNDLDFCLRAQRAGWRTIYTPHATL
                     IHHELISRGHLSDDFDATRFTGEWQNRFAAGDPYFNPHLSRYSDDYRVDDEGVRALYP
                     GHPVIDRTAVKAILVVKVDHIGDFITSLPAIRRLKEAFPAARLTALVAPASAAIASVE
                     PAIDACIPFEFFHARSELGDKELTEADLDALKARLAPYRFDIAVDLRKHLSTRHLLQC
                     SGARVTAGYDSLEAFPWLDIVLEWESDKALQRKRSHIADDLVNLSVAIDAACRPDRTL
                     FDPLPVPMAVRELPHHVRHLFARPVVAIHPGAGNIMKQWPEKHVRALIELLIAQDGVA
                     VLLVGGTDDFAIAASIMERVDRPDVVGSVAGLTALRDMPRLLAACTLFIGCDSGPKHI
                     AAASGVPTIGIHSGIVDPAEWGPMGERAVALYRDMSCAPCFLAKPEHCPRGLACVEML
                     DPTLVWQMARRLLGRPVSDVIAPVHSAFPTRNEAIVAAALPGEVAGEAQVEPPPAPPS
                     VAIPIEGKRSGKHPGKAASRTAVKPAIVEQRPEKPAVKQPAKPAVARTDMATKQSSKR
                     AQRSPVAGSK"
BASE COUNT          655 a         1094 c          973 g          542 t
ORIGIN      
        1 cgccggtgcc tttgcggcag gtgttccatt cggcgtccaa cggcccggcc ttatgaccgg
       61 ctgcagcgat caatgaagca atgttgctgg ccaacacacc gggcgggacc agcaaaccgg
      121 taagcacgag caagccagcc acgaacacgc tggcgatgag gatcatcggc ctcgcacgca
      181 tcagtcacca tcttcggccg gccggccgag catgtatccg aaacatttcg tgtccggttc
      241 ggatcctccg gctcaaggca atatcgccga gatcgcggag tgcccggagg aagctgagaa
      301 caccggcaac gccaatcagc atctccgggc actccgcgat ctccgggatt catggaaccg
      361 cggtacgcgc accggcgatg catcagatac gcaacaccag aaccgacctg tgccgtaaca
      421 aagttacgac ggccttccag tacaaacaaa aaacggattt tcccaccccg gcttgccgta
      481 cagcaacggc gccccgtcca acgtgcagac ggtgccgcct gctgcctcca gcaccgcctg
      541 aggcgcggcc gtgtcccact ccatcgtgcg gccgaagcgc gggtacagat cggcaatccc
      601 ctccgccagc cggcagaact tcaggctcga cccaaaattc atggtttttg ccacggtccg
      661 gccagcgagg aacgccgcca accgggcgct gtccccatga tgacggctgg cgagcacggt
      721 cagcccctcg gcaggtgccg aacgagcgtg caccctggtc tcgataccac ggtgacgttt
      781 ccaggcgcca accccaacga tgccgccgaa caactcgccc gtcgcgggca cgccaaccac
      841 gccaagccgg atgcgatggt cgcgcaccag cccgatgttc accgcgaaat cgtcgctccc
      901 atcggtgaac tcgcgcgtgc catccaacgg atccaccaac cagaacaatg gcgaggcagc
      961 gacgatggca ccgccggcca ccgcctcctc ggcgaccacg gggatctcgg gcgctgctgc
     1021 caacaagccg gccacgatca gagtttcggc cgcctgatcg gcctcggtga ccacggaccg
     1081 gtcggctttc cgcgacaccg caaagccgcg cgcacggatg gcgaggatca cctccgccgc
     1141 acgcaaggca agtccggcgg ccagttccag cagagcctcg tcagtcattt cgaccccgcc
     1201 actgggcttc gttgggcccg tttgctggat tgcttcgttg ccatgtcagt ccgcgccacc
     1261 gctggttttg ccggttgctt taccgctggt ttctctgggc gctgttccac gatcgcaggc
     1321 ttcaccgcag tgcgggacgc cgctttgccc gggtgctttc cagaccgctt gccttcgatc
     1381 ggaattgcga ccgaaggcgg cgccggaggt ggttccacct gtgcctcccc agcaacctca
     1441 ccaggcagcg cggcggcgac aatagcctca ttccgggtgg gaaacgcgct gtgcaccggc
     1501 gcaataacgt cactcacagg ccggcccaga agccggcgtg ccatttgcca gaccaacgtc
     1561 ggatccaaca tttcaacaca ggccagaccg cgcggacaat gctcaggctt tgccaggaaa
     1621 cacggcgcgc agctcatgtc acggtagagg gcaaccgccc gctcgcccat cggtccccat
     1681 tcggcggggt cgacgatgcc ggaatgaatg ccgatggttg gaacccccga cgctgccgca
     1741 atatgctttg gtccgctgtc gcacccgatg aacaaagtgc aggcggcgag cagccgcggc
     1801 atatcgcgca acgcggtcag tcccgccacc gagccgacga cgtcaggccg atccacccgc
     1861 tccatgatcg aggcggcgat ggcaaaatca tcggtgccac cgaccagcag cacagcgacg
     1921 ccatcctgtg caatcagcag ctcgatcaac gcccgcacgt gcttttccgg ccactgcttc
     1981 ataatgttgc ccgcacccgg atggatcgcc accactgggc gggcaaacaa atggcggacg
     2041 tgatgcggca gttccctaac cgccatcggc acgggtaacg ggtcgaacaa tgtccggtct
     2101 ggccggcacg ctgcatcgat tgccaccgac aggttcacca ggtcgtcggc aatatggctg
     2161 cgcttgcgtt gcagtgcctt gtcgctctcc cattccagaa cgatgtccag ccaagggaac
     2221 gcttccagcg aatcataccc ggccgtcacg cgcgctccgg agcactgcag caagtgccgg
     2281 gtcgaaagat gcttgcgcag atcgaccgca atgtcgaaac gatacggtgc cagtcgagct
     2341 ttaagcgcat cgagatcggc ctcggtcagc tctttgtcgc ccagttcgga acgggcatga
     2401 aagaattcga agggaatgca ggcgtcgatg gcgggctcga ccgaggcgat cgcggccgag
     2461 gcgggcgcca ccagcgcggt cagtctggcg gccggaaacg cctccttcaa gcgccggatc
     2521 gccggcagcg aggtgataaa atcgccgatg tggtcgacct tgaccaccag gatcgccttc
     2581 accgccgtgc ggtcgatcac cggatggccc ggatagagcg cccgcacgcc ttcatcgtcg
     2641 acccgataat catccgaata acgtgacaaa tgcggattga aatacgggtc cccggcggca
     2701 aaccggttct gccactcgcc ggtgaaccgg gtggcatcga aatcgtcgga caaatgcccg
     2761 cggctgatca gctcgtgatg gatcaaggtc gcgtgcggcg tatagatcgt gcgccatccg
     2821 gcacgttgcg cccgaagaca gaaatccaga tcgttgttga tgacatcgtg ggattcgtcg
     2881 aaccggccga gtgtttcgaa gacctcgcga cggatcagca tgcaggcgcc ggtcaccgcg
     2941 gtcacttcgc gcgtcgtctg ggccaggccg aaatatccgg ggtcgtgctg atcggcatgc
     3001 cggaatgcgt gacggcccat gccgtcgccc aaaaacatgc cggcgtgctg aacggaacgg
     3061 ttcggataca acagacgggc accgacgatg ccggtccctg accacgtcgc tgcctccagc
     3121 atggcatcga gccagtccgg ctggatgatc tcgatgtcgt cattgagaaa taacaaatat
     3181 tcgccgtccg aggcggccac cgcagcgtta ttgaagcgcg accaattgaa cggcggcggc
     3241 atttcgacga ttttgtctgc gtgt
//
LOCUS       DATAVD010001974         1537 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Acetobacteraceae bacterium isolate SMAG_U5590
            k141_3163264, whole genome shotgun sequence.
ACCESSION   DATAVD010001974 DATAVD010000000
VERSION     DATAVD010001974.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37956413
            Sequence Read Archive: SRR11836410
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acetobacteraceae bacterium (soil metagenome)
  ORGANISM  Acetobacteraceae bacterium
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Acetobacterales; Acetobacteraceae.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 06:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,516
            CDSs (total)                      :: 7,479
            Genes (coding)                    :: 7,387
            CDSs (with protein)               :: 7,387
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 31 of 92
            Pseudo Genes (incomplete)         :: 61 of 92
            Pseudo Genes (internal stop)      :: 22 of 92
            Pseudo Genes (multiple problems)  :: 20 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Acetobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3163264"
                     /isolate="SMAG_U5590"
                     /isolation_source="soil"
                     /db_xref="taxon:1909293"
                     /environmental_sample
                     /geo_loc_name="USA: California"
                     /lat_lon="36.5 N 121.8 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            67..>1537
                     /locus_tag="VHX39_37580"
     CDS             67..>1537
                     /locus_tag="VHX39_37580"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEX3996914.1"
                     /translation="MADELNRHGAGLFCADRDPVSLAAAIRSAADNRDALTRAAMAKR
                     ADWLAVNNASALVADLLAHGKAEVRSTPKRALVIYPFADLMERRSGASRRCAMLLDYL
                     AASGLQVDALQAGGRVEQVNDKILVRGMGHASGLSRLLYCVFTAAMYVAPRAWRPHGW
                     QIWEYWRLRLDRPMQRRIAQLVARSDVVLLEYPFLAAAVVPIARRLGRRVVLTTYDVL
                     ANQLTSTPRLHRIMWATEQRALRLADDVVSVASDDQALLAKHGIAALVSPNPTDAQLF
                     SGGALPAPREVVTRLYDIDLPGDDILLFVGSRHGPNVIAVDRLREIAASLDRQPGGRR
                     VGVVVVGRCAEPEQAGNFLALGVVDDALLLALYGLAFAAVIPLPSGTGASLKTVEAMA
                     SGVLVIGTPIAFRGLDVENGQQCVIEPDINRYCDLIRELLQDADRAKAIAAAGLSFAR
                     RYHYVRCYSVYNRFLGLDAAYSPLPATGALDPILLHLANL"
BASE COUNT          236 a          466 c          518 g          317 t
ORIGIN      
        1 acctctggcg tgttctctga ggccatgtcg gcgggaaagc cggccatcac caccaggaat
       61 acctggatgg ccgacgagtt gaacaggcac ggcgccgggt tgttctgcgc agaccgggac
      121 ccggtctcgc tcgcggcggc gattcgttcc gccgccgaca accgtgacgc actgacccgt
      181 gccgcaatgg ccaagcgcgc tgattggctg gccgtaaaca acgcctccgc tttggtcgcc
      241 gatctgctgg ctcatgggaa agcggaggtt agatcgacgc caaaacgtgc tctggtgatc
      301 tatccctttg cggacctgat ggagcggcgg tccggcgcga gccgccgctg cgcgatgctg
      361 ctcgactatc tggcggcgtc cggcctgcaa gttgacgcac tccaggcagg gggcagggtg
      421 gaacaggtca atgacaagat cctcgtgcgt ggcatgggcc acgccagcgg attgtcacgg
      481 ctgttgtatt gtgtcttcac ggccgcaatg tatgtggcgc cccgggcttg gcggccgcac
      541 ggatggcaga tctgggaata ctggcggctg cgcctggaca ggcccatgca gcgccggatc
      601 gcgcagttgg tcgcacgttc cgacgtcgtg ctgctggaat acccgttctt ggcagcagcc
      661 gtggtgccca tcgcgcggcg gcttggccga cgggtggtgc tcacgactta tgacgtgctc
      721 gccaatcagc taacctccac cccgcgcttg caccgcatca tgtgggcgac ggagcagcgg
      781 gcgctgcgtt tggctgatga cgtcgtcagc gtcgcctcag acgatcaggc gctgctcgcg
      841 aagcatggaa ttgccgcgct ggtttcccct aacccgacgg atgcccagct gttcagtggg
      901 ggtgccttgc ccgccccgcg cgaggtggtg acgcgcttgt atgacatcga cttgcccggc
      961 gatgacattc tgctgttcgt cggcagtcgg catggtccga atgtgatcgc cgtcgatcgg
     1021 ctgcgcgaga tcgccgcctc tctggatcgg caaccgggtg gccggcgggt tggcgtggtg
     1081 gtggtcgggc gttgcgccga gccggaacag gccggcaatt ttctggcttt gggcgtcgtt
     1141 gacgatgccc tgctgctggc actctacgga ctggcattcg cggcggtcat cccgctcccc
     1201 tccggtacag gagcatcgct caagaccgtc gaggcgatgg catcgggcgt gctggtgatc
     1261 ggtacgccca tcgcgttccg cgggttggat gtcgagaatg ggcaacaatg cgtgatcgag
     1321 cccgacatca accggtattg tgatcttatt cgggagctgt tgcaggacgc ggacagagcc
     1381 aaggcgatcg ccgccgccgg actttcgttt gctcggcgtt atcattacgt ccggtgctac
     1441 tcagtctata accggtttct cgggctcgac gcagcatatt ccccgttacc cgcgacgggg
     1501 gcgttggatc cgattttgtt gcacttggcg aatcttg
//
